Citrus Sinensis ID: 003025
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
|
|
Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 856 | 2.2.26 [Sep-21-2011] | |||||||
| Q9LMI0 | 851 | Probable alpha,alpha-treh | yes | no | 0.990 | 0.996 | 0.761 | 0.0 | |
| O23617 | 862 | Alpha,alpha-trehalose-pho | no | no | 0.982 | 0.975 | 0.678 | 0.0 | |
| Q94AH8 | 860 | Alpha,alpha-trehalose-pho | no | no | 0.975 | 0.970 | 0.657 | 0.0 | |
| Q9LRA7 | 867 | Probable alpha,alpha-treh | no | no | 0.992 | 0.980 | 0.615 | 0.0 | |
| Q0WUI9 | 856 | Probable alpha,alpha-treh | no | no | 0.976 | 0.976 | 0.612 | 0.0 | |
| O80738 | 861 | Probable alpha,alpha-treh | no | no | 0.984 | 0.979 | 0.617 | 0.0 | |
| Q9ZV48 | 862 | Probable alpha,alpha-treh | no | no | 0.964 | 0.958 | 0.582 | 0.0 | |
| Q54K57 | 733 | Alpha,alpha-trehalose-pho | yes | no | 0.828 | 0.967 | 0.353 | 1e-142 | |
| Q9FZ57 | 822 | Probable alpha,alpha-treh | no | no | 0.865 | 0.901 | 0.343 | 1e-127 | |
| Q54NU9 | 790 | Alpha,alpha-trehalose-pho | no | no | 0.759 | 0.822 | 0.339 | 1e-125 |
| >sp|Q9LMI0|TPS7_ARATH Probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 7 OS=Arabidopsis thaliana GN=TPS7 PE=1 SV=1 | Back alignment and function desciption |
|---|
Score = 1384 bits (3581), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 650/854 (76%), Positives = 755/854 (88%), Gaps = 6/854 (0%)
Query: 1 MMSKSYTNLLDLASGNFPAMGPSREKKRLPRVMTVPGVISELDDDQANSVSSDVPSSVAQ 60
M+S+SYTNLLDLASGNFP MG RE++RLPRVMTVPG +SE D+DQA SVSSD PSSV+
Sbjct: 1 MISRSYTNLLDLASGNFPVMG--RERRRLPRVMTVPGNVSEFDEDQAYSVSSDNPSSVSS 58
Query: 61 DRVIIVANQLPVKAKRRPDNKGWSFSWDEDSLLLQLKDGLPEDMEVIYVGSLKVDVDLSE 120
DR+IIVAN+LP+KA++R N WSFSWD+DSL LQLKDGLPEDME++YVGSL VDVD +E
Sbjct: 59 DRMIIVANRLPLKAEKR--NGSWSFSWDQDSLYLQLKDGLPEDMEILYVGSLSVDVDSNE 116
Query: 121 QDDVSQLLLDRFKCVPAFLPPDILTKFYHGFCKQHLWPLFHYMLPFSATHGGRFDRSLWE 180
QDDV+Q+LLD+FKCVP F PPD+ +KFY GFCK+ +WPLFHYMLPFSA HGGRFDRSLWE
Sbjct: 117 QDDVAQILLDKFKCVPTFFPPDLQSKFYDGFCKRQIWPLFHYMLPFSADHGGRFDRSLWE 176
Query: 181 AYVSANKIFSQRVIEVINPEDDYVWIHDYHLMVLPTFLRRRFTRLRMGFFLHSPFPSSEI 240
AYV+ NK+F Q+VIEVINP+DD+VWIHDYHLMVLPTFLRRRF R+RMGFFLHSPFPSSEI
Sbjct: 177 AYVATNKLFFQKVIEVINPDDDFVWIHDYHLMVLPTFLRRRFNRIRMGFFLHSPFPSSEI 236
Query: 241 YRTLPVREEILKALLNADLIGFHTFDYARHFLSCCSRMLGLEYQSKRGYIGLEYYGRTVG 300
YR+LPVREEILKALLN+DLIGFHTFDYARHFL+CCSRMLGLEYQSKRGYIGLEYYGRTVG
Sbjct: 237 YRSLPVREEILKALLNSDLIGFHTFDYARHFLTCCSRMLGLEYQSKRGYIGLEYYGRTVG 296
Query: 301 IKIMPVGIHMGQIESVLRLADKDWRVQELKQQFEGKTVLLGVDDMDIFKGVDLKLLAMEH 360
IKIMPVGI+MG+I+SV+R ++++ +V EL+ +FEGKTVLLG+DDMDIFKG++LKLLAME
Sbjct: 297 IKIMPVGINMGRIQSVMRYSEEEGKVMELRNRFEGKTVLLGIDDMDIFKGINLKLLAMEQ 356
Query: 361 LLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDKP 420
+L+QHP W+GRAVLVQI NPARG+G D+EEI+ EI +C+RIN FG+PGY+P+++ID P
Sbjct: 357 MLRQHPNWRGRAVLVQIVNPARGKGIDVEEIRGEIEESCRRINGEFGKPGYQPIIYIDTP 416
Query: 421 VTLSERAAYYTIAECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSE 480
V+++E AYY IAECVVVTAVRDGMNLTPYEYIVCRQG+ GSE S+ S PKKSMLV SE
Sbjct: 417 VSINEINAYYHIAECVVVTAVRDGMNLTPYEYIVCRQGLLGSE--SDFSGPKKSMLVASE 474
Query: 481 FIGCSPSLSGAIRVNPWNIEATAEAMHEAIQMNEAEKQLRHEKHYRYVSTHDVAYWARSF 540
FIGCSPSLSGAIRVNPWN+EAT EA++EA+ M++AEKQLRHEKH+RYVSTHDVAYW+RSF
Sbjct: 475 FIGCSPSLSGAIRVNPWNVEATGEALNEALSMSDAEKQLRHEKHFRYVSTHDVAYWSRSF 534
Query: 541 FQDMERTCKDHFKRRCWGIGLSFGFRVVALDPNFRKLSIDAIVSAYLRSKSRAILFDYDG 600
QD+ER C DHFK+RCWG+G+SFGFRVVALDPNFRKLSI IVS Y R+KSRAIL DYDG
Sbjct: 535 LQDLERICVDHFKKRCWGMGISFGFRVVALDPNFRKLSIPCIVSDYKRAKSRAILLDYDG 594
Query: 601 TVMPQTSINKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSPCKKLGIAAEHGY 660
T+MPQ SINKAPSQ V++ ++ LC D +N++F+VSGRGR+ L KWF+PCKK+GIAAEHGY
Sbjct: 595 TLMPQNSINKAPSQEVLNFLDALCEDKKNSIFIVSGRGRESLSKWFTPCKKIGIAAEHGY 654
Query: 661 FMRWSADEEWQNCGQSVDFGWIQIAEPVMKLYTESTDGSYIEIKESALVWHHRDADPGFG 720
F++WS EEW+ CGQS DFGW+QI EPVMK YTESTDGS IEIKESALVW +RDADPGFG
Sbjct: 655 FLKWSGSEEWETCGQSSDFGWMQIVEPVMKQYTESTDGSSIEIKESALVWQYRDADPGFG 714
Query: 721 SSQAKELLDHLESVLANEPAAVKSGQFIVEVKPQGVSKGVVAEKIFTTMAESGRHADFVL 780
S QAKE+L+HLESVLANEP AVKSG +IVEVKPQGVSKG V+EKIF++MA G+ DFVL
Sbjct: 715 SLQAKEMLEHLESVLANEPVAVKSGHYIVEVKPQGVSKGSVSEKIFSSMAGKGKPVDFVL 774
Query: 781 CIGDDRSDEDMFEIIGNATSSGVLSSNASVFACTVGQKPSKAKYYLDDAAEVVTMLEALA 840
CIGDDRSDEDMFE IGNA S +L NA VFACTVGQKPSKAKYYLDD EV MLE+LA
Sbjct: 775 CIGDDRSDEDMFEAIGNAMSKRLLCDNALVFACTVGQKPSKAKYYLDDTTEVTCMLESLA 834
Query: 841 EASAPPSFEVGASD 854
EAS +F + D
Sbjct: 835 EASEASNFSMRELD 848
|
Arabidopsis thaliana (taxid: 3702) EC: 2EC: .EC: 4EC: .EC: 1EC: .EC: 1EC: 5 |
| >sp|O23617|TPS5_ARATH Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 5 OS=Arabidopsis thaliana GN=TPS5 PE=1 SV=2 | Back alignment and function description |
|---|
Score = 1228 bits (3176), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 575/847 (67%), Positives = 689/847 (81%), Gaps = 6/847 (0%)
Query: 1 MMSKSYTNLLDLASGNFPAMGPSREKKRLPRVMTVPGVISELDDDQ-ANSVSSDVPSSVA 59
M+S+SY+NLLDLASGNF + SREKKR PRV TV GV+SELDDD +NSV SD PSSV
Sbjct: 1 MVSRSYSNLLDLASGNFHSF--SREKKRFPRVATVTGVLSELDDDNNSNSVCSDAPSSVT 58
Query: 60 QDRVIIVANQLPVKAKRRPDNKGWSFSWDEDSLLLQLKDGLPEDMEVIYVGSLKVDVDLS 119
QDR+IIV NQLP+K+ R K SFSWD DSLLLQLKDG+ EDMEV+Y+G LK +D
Sbjct: 59 QDRIIIVGNQLPIKSHRNSAGK-LSFSWDNDSLLLQLKDGMREDMEVVYIGCLKEQIDTV 117
Query: 120 EQDDVSQLLLDRFKCVPAFLPPDILTKFYHGFCKQHLWPLFHYMLPFSATHGGRFDRSLW 179
EQDDVSQ LL+ FKCVPA++PP++ TK+YHGFCKQHLWPLFHYMLP + GGRFDRSLW
Sbjct: 118 EQDDVSQRLLENFKCVPAYIPPELFTKYYHGFCKQHLWPLFHYMLPLTPDLGGRFDRSLW 177
Query: 180 EAYVSANKIFSQRVIEVINPEDDYVWIHDYHLMVLPTFLRRRFTRLRMGFFLHSPFPSSE 239
+AY+S NKIF+ +V+EVI+P+DD+VW+HDYHLMVLPTFLR+RF R+++GFFLHSPFPSSE
Sbjct: 178 QAYLSVNKIFADKVMEVISPDDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSE 237
Query: 240 IYRTLPVREEILKALLNADLIGFHTFDYARHFLSCCSRMLGLEYQSKRGYIGLEYYGRTV 299
IYRTLPVR E+L+ALLNADLIGFHTFDYARHFLSCCSRMLGL YQSKRG IGLEYYGRTV
Sbjct: 238 IYRTLPVRNELLRALLNADLIGFHTFDYARHFLSCCSRMLGLSYQSKRGTIGLEYYGRTV 297
Query: 300 GIKIMPVGIHMGQIESVLRLADKDWRVQELKQQFEGKTVLLGVDDMDIFKGVDLKLLAME 359
IKI+PVGIH+ Q++S+L L + +V EL+ QF + VLLGVDDMDIFKG+ LKLLAME
Sbjct: 298 SIKILPVGIHISQLQSILNLPETQTKVAELRDQFLDQKVLLGVDDMDIFKGISLKLLAME 357
Query: 360 HLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDK 419
LL QHP+ +GR VLVQIANPARGRGKD++E+Q+E AT KRINE FGRPGY+PVV ID
Sbjct: 358 QLLTQHPEKRGRVVLVQIANPARGRGKDVQEVQSETEATVKRINEMFGRPGYQPVVLIDT 417
Query: 420 PVTLSERAAYYTIAECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSS--ESSAPKKSMLV 477
P+ ER AYY IAEC +VTAVRDGMNL PYEYI+CRQG + + SA KKSMLV
Sbjct: 418 PLQFFERIAYYVIAECCLVTAVRDGMNLIPYEYIICRQGNPKLNETIGLDPSAAKKSMLV 477
Query: 478 VSEFIGCSPSLSGAIRVNPWNIEATAEAMHEAIQMNEAEKQLRHEKHYRYVSTHDVAYWA 537
VSEFIGCSPSLSGAIRVNPWNI+A EAM A+ ++EAEKQ+RHEKH++YVSTHDVAYWA
Sbjct: 478 VSEFIGCSPSLSGAIRVNPWNIDAVTEAMDYALIVSEAEKQMRHEKHHKYVSTHDVAYWA 537
Query: 538 RSFFQDMERTCKDHFKRRCWGIGLSFGFRVVALDPNFRKLSIDAIVSAYLRSKSRAILFD 597
RSF QD+ER C DH ++RCWGIG GFRVVALDP+F+KLSI+ IVSAY R+K+RAIL D
Sbjct: 538 RSFIQDLERACGDHVRKRCWGIGFGLGFRVVALDPSFKKLSIEHIVSAYKRTKNRAILLD 597
Query: 598 YDGTVMPQTSINKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSPCKKLGIAAE 657
YDGT++ SI P++ I I+N L +D +N V++VSG+ R L +WFS C LG+ AE
Sbjct: 598 YDGTMVQPGSIRTTPTRETIEILNNLSSDPKNIVYLVSGKDRRTLTEWFSSCDDLGLGAE 657
Query: 658 HGYFMRWSADEEWQNCGQSVDFGWIQIAEPVMKLYTESTDGSYIEIKESALVWHHRDADP 717
HGYF+R + +W+ F W QIAEPVM+LYTE+TDGS IE KE+ALVW+++ ADP
Sbjct: 658 HGYFIRPNDGTDWETSSLVSGFEWKQIAEPVMRLYTETTDGSTIETKETALVWNYQFADP 717
Query: 718 GFGSSQAKELLDHLESVLANEPAAVKSGQFIVEVKPQGVSKGVVAEKIFTTMAESGRHAD 777
FGS QAKEL++HLESVL N+P +VK+GQ +VEVKPQGV+KG+VAE++ TTM E G+ D
Sbjct: 718 DFGSCQAKELMEHLESVLTNDPVSVKTGQQLVEVKPQGVNKGLVAERLLTTMQEKGKLLD 777
Query: 778 FVLCIGDDRSDEDMFEIIGNATSSGVLSSNASVFACTVGQKPSKAKYYLDDAAEVVTMLE 837
F+LC+GDDRSDEDMFE+I +A LS A +FACTVGQKPSKAKYYLDD AE++ ML+
Sbjct: 778 FILCVGDDRSDEDMFEVIMSAKDGPALSPVAEIFACTVGQKPSKAKYYLDDTAEIIRMLD 837
Query: 838 ALAEASA 844
LA +
Sbjct: 838 GLAATNT 844
|
Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 1 EC: 5 |
| >sp|Q94AH8|TPS6_ARATH Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 OS=Arabidopsis thaliana GN=TPS6 PE=1 SV=2 | Back alignment and function description |
|---|
Score = 1203 bits (3113), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 567/862 (65%), Positives = 691/862 (80%), Gaps = 27/862 (3%)
Query: 1 MMSKSYTNLLDLASGNFPAMGPSREKKRLPRVMTVPGVISELDDDQANSVSSDVPSSVAQ 60
M+S+SY+NLL+LASG+ P G R +++PR+M V G++S +D+D ++ S +
Sbjct: 1 MVSRSYSNLLELASGDSPTFG--RMNRQIPRIMAVAGIMSNIDNDSKDTDLS------PK 52
Query: 61 DRVIIVANQLPVKAKRRPDN-------------KGWSFSWDEDSLLLQLKDGL-PEDMEV 106
DR+IIVAN+LP++A+RR D KGW+FSWDE+SLLLQLKDGL E +EV
Sbjct: 53 DRIIIVANELPIRAQRRVDGNGSGSSSSSTCCSKGWNFSWDENSLLLQLKDGLGDEAIEV 112
Query: 107 IYVGSLKVDVDLSEQDDVSQLLLDRFKCVPAFLPPDILTKFYHGFCKQHLWPLFHYMLPF 166
IYVG LK ++ L+EQ++V Q+LL+ FKCVP FLP D+ T++YHGFCKQ LWPLFHYMLP
Sbjct: 113 IYVGCLKEEIPLNEQEEVYQILLESFKCVPTFLPLDLYTRYYHGFCKQQLWPLFHYMLPL 172
Query: 167 SATHGGRFDRSLWEAYVSANKIFSQRVIEVINPEDDYVWIHDYHLMVLPTFLRRRFTRLR 226
S GGRFDR+LW+AYVS NKIF+ R++EVINPEDD+VWIHDYHLMVLPTFLR+RF R++
Sbjct: 173 SPDLGGRFDRTLWQAYVSVNKIFADRIMEVINPEDDFVWIHDYHLMVLPTFLRKRFNRVK 232
Query: 227 MGFFLHSPFPSSEIYRTLPVREEILKALLNADLIGFHTFDYARHFLSCCSRMLGLEYQSK 286
+GFFLHSPFPSSEIY+TLP+REE+L+ALLN+DLIGFHTFDYARHFLSCCSRMLGL Y+SK
Sbjct: 233 LGFFLHSPFPSSEIYKTLPIREELLRALLNSDLIGFHTFDYARHFLSCCSRMLGLTYESK 292
Query: 287 RGYIGLEYYGRTVGIKIMPVGIHMGQIESVLRLADKDWRVQELKQQF--EGKTVLLGVDD 344
RGYIGLEYYGRTV IKI+PVGIHMGQ++SVL L + + +V EL +++ +G+T+LLGVDD
Sbjct: 293 RGYIGLEYYGRTVSIKILPVGIHMGQLQSVLSLPETERKVGELIERYGRKGRTMLLGVDD 352
Query: 345 MDIFKGVDLKLLAMEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINE 404
MDIFKG+ LKLLAME LL QHP+WQG+ VLVQIANPARG+GKD++E+QAE ++T KRINE
Sbjct: 353 MDIFKGITLKLLAMEQLLMQHPEWQGKVVLVQIANPARGKGKDVKEMQAETYSTVKRINE 412
Query: 405 TFGRPGYEPVVFIDKPVTLSERAAYYTIAECVVVTAVRDGMNLTPYEYIVCRQGVSGSES 464
TFGRPGY+P+V ID P+ ER AYY +AEC +VTAVRDGMNL PYEYIV RQG +
Sbjct: 413 TFGRPGYDPIVLIDAPLKFYERVAYYVVAECCLVTAVRDGMNLIPYEYIVSRQGNEKLDK 472
Query: 465 SSESSAP---KKSMLVVSEFIGCSPSLSGAIRVNPWNIEATAEAMHEAIQMNEAEKQLRH 521
+ A KKSMLVVSEFIGCSPSLSGAIRVNPWN++A A+AM A+++ E EKQLRH
Sbjct: 473 ILKLEANNRNKKSMLVVSEFIGCSPSLSGAIRVNPWNVDAVADAMDSALEVAEPEKQLRH 532
Query: 522 EKHYRYVSTHDVAYWARSFFQDMERTCKDHFKRRCWGIGLSFGFRVVALDPNFRKLSIDA 581
EKHY+YVSTHDV YWARSF QD+ER+C +H +RRCWGIG FRVVALD +FRKLS++
Sbjct: 533 EKHYKYVSTHDVGYWARSFLQDLERSCGEHGRRRCWGIGFGLSFRVVALDQSFRKLSMEH 592
Query: 582 IVSAYLRSKSRAILFDYDGTVMPQTSINKAPSQAVISIINTLCNDARNTVFVVSGRGRDC 641
IVSAY R+K+RAIL DYD T+MPQ SI+K PS I I+NTLC D N VF+VS + R+
Sbjct: 593 IVSAYKRTKTRAILLDYDDTLMPQGSIDKRPSSKSIDILNTLCRDKGNLVFIVSAKSRET 652
Query: 642 LGKWFSPCKKLGIAAEHGYFMRWSADEEWQNCGQSVDFGWIQIAEPVMKLYTESTDGSYI 701
L WFSPC+KLGIAAEHGYF+R EW+NC +VD W QIAEPVM+LYTE+TDGS I
Sbjct: 653 LSDWFSPCEKLGIAAEHGYFLRLRKAVEWENCVAAVDCSWKQIAEPVMELYTETTDGSTI 712
Query: 702 EIKESALVWHHRDADPGFGSSQAKELLDHLESVLANEPAAVKSGQFIVEVKPQGVSKGVV 761
E KE+ALVW + DADP FGS QAKELLDHLESVLANEP VK GQ VEVKPQGVSKG++
Sbjct: 713 EDKETALVWSYEDADPDFGSCQAKELLDHLESVLANEPVTVKRGQNYVEVKPQGVSKGLI 772
Query: 762 AEKIFTTMAESGRHADFVLCIGDDRSDEDMFEIIGNATSSGVLSSNASVFACTVGQKPSK 821
A ++ + M E G +FVLCIGDDRSDEDMFE+I ++T ++ A +FACTVGQKPSK
Sbjct: 773 ARRMLSMMQERGTLPEFVLCIGDDRSDEDMFEVICSSTEGPSIAPRAEIFACTVGQKPSK 832
Query: 822 AKYYLDDAAEVVTMLEALAEAS 843
AKYYLDD E+V ++ LA +
Sbjct: 833 AKYYLDDTTEIVRLMHGLASVT 854
|
Regulates plant architecture, shape of epidermal pavement cells and branching of trichomes. Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 1 EC: 5 |
| >sp|Q9LRA7|TPS9_ARATH Probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 9 OS=Arabidopsis thaliana GN=TPS9 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 1123 bits (2905), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 528/858 (61%), Positives = 664/858 (77%), Gaps = 8/858 (0%)
Query: 1 MMSKSYTNLLDLASGNFPAMGPSREKKRLPRVMTVPGVISELDDDQANSVSSDVPSSVAQ 60
M+S+S N LDLAS + + + ++ LPRVMTVPG+ISELD ++ S S+ ++
Sbjct: 1 MVSRSCANFLDLASWDL--LDFPQTQRALPRVMTVPGIISELDGGYSDGSSDVNSSNSSR 58
Query: 61 DRVIIVANQLPVKAKRRPDNKGWSFSWDEDSLLLQLKDGLPEDMEVIYVGSLKVDVDLSE 120
+R IIVAN LP++AKR + W FSWDEDSLLLQL+DG D E +Y+GSL D+ +SE
Sbjct: 59 ERKIIVANMLPLQAKRDTETGQWCFSWDEDSLLLQLRDGFSSDTEFVYIGSLNADIGISE 118
Query: 121 QDDVSQLLLDRFKCVPAFLPPDILTKFYHGFCKQHLWPLFHYMLPFSATHGGRFDRSLWE 180
Q++VS LL F CVP FLP ++ KFY GFCK HLWPLFHYMLP HG RFDR LW+
Sbjct: 119 QEEVSHKLLLDFNCVPTFLPKEMQEKFYLGFCKHHLWPLFHYMLPMFPDHGDRFDRRLWQ 178
Query: 181 AYVSANKIFSQRVIEVINPEDDYVWIHDYHLMVLPTFLRRRFTRLRMGFFLHSPFPSSEI 240
AYVSANKIFS RV+EVINPE+DYVWIHDYHLMVLPTFLR+RF R+++GFFLHSPFPSSEI
Sbjct: 179 AYVSANKIFSDRVMEVINPEEDYVWIHDYHLMVLPTFLRKRFNRIKLGFFLHSPFPSSEI 238
Query: 241 YRTLPVREEILKALLNADLIGFHTFDYARHFLSCCSRMLGLEYQSKRGYIGLEYYGRTVG 300
YRTLPVR+++L+ LLN DLIGFHTFDYARHFLSCCSRMLGL+Y+SKRG+IGL+Y+GRTV
Sbjct: 239 YRTLPVRDDLLRGLLNCDLIGFHTFDYARHFLSCCSRMLGLDYESKRGHIGLDYFGRTVF 298
Query: 301 IKIMPVGIHMGQIESVLRLADKDWRVQELKQQFEGKTVLLGVDDMDIFKGVDLKLLAMEH 360
IKI+PVGIHMG++ESVL L +++E+++QF+GK ++LGVDDMDIFKG+ LKL+AME
Sbjct: 299 IKILPVGIHMGRLESVLNLPSTAAKMKEIQEQFKGKKLILGVDDMDIFKGISLKLIAMER 358
Query: 361 LLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDKP 420
L + + +G+ VL+QI NPAR GKD+EE + E ++T KRINE +G GY+PV+ ID+
Sbjct: 359 LFETYWHMRGKLVLIQIVNPARATGKDVEEAKKETYSTAKRINERYGSAGYQPVILIDRL 418
Query: 421 VTLSERAAYYTIAECVVVTAVRDGMNLTPYEYIVCRQGVSGSESS---SESSAPKKSMLV 477
V E+ AYY +A+C +V AVRDGMNL PY+YI+CRQG G + + S SA + SMLV
Sbjct: 419 VPRYEKTAYYAMADCCLVNAVRDGMNLVPYKYIICRQGTPGMDKAMGISHDSA-RTSMLV 477
Query: 478 VSEFIGCSPSLSGAIRVNPWNIEATAEAMHEAIQMNEAEKQLRHEKHYRYVSTHDVAYWA 537
VSEFIGCSPSLSGAIRVNPW+++A AEA++ A+ M E EK+LRHEKHY YVSTHDV YWA
Sbjct: 478 VSEFIGCSPSLSGAIRVNPWDVDAVAEAVNLALTMGETEKRLRHEKHYHYVSTHDVGYWA 537
Query: 538 RSFFQDMERTCKDHFKRRCWGIGLSFGFRVVALDPNFRKLSIDAIVSAYLRSKSRAILFD 597
+SF QD+ER C++H+ +RCWGIG FRV++L P+FRKLSID IVS Y ++ RAI D
Sbjct: 538 KSFMQDLERACREHYNKRCWGIGFGLSFRVLSLSPSFRKLSIDHIVSTYRNTQRRAIFLD 597
Query: 598 YDGTVMPQTSINKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSPCKKLGIAAE 657
YDGT++P++SI K P+ V+S++ +LC D +NTVFVVSGRG + L W SPC+ LGIAAE
Sbjct: 598 YDGTLVPESSIIKTPNAEVLSVLKSLCGDPKNTVFVVSGRGWESLSDWLSPCENLGIAAE 657
Query: 658 HGYFMRWSADEEWQNCGQSVDFGWIQIAEPVMKLYTESTDGSYIEIKESALVWHHRDADP 717
HGYF+RWS+ +EW+ C S + W + EPVM+ Y ++TDGS IE KESALVWHH+DADP
Sbjct: 658 HGYFIRWSSKKEWETCYSSAEAEWKTMVEPVMRSYMDATDGSTIEYKESALVWHHQDADP 717
Query: 718 GFGSSQAKELLDHLESVLANEPAAVKSGQFIVEVKPQGVSKGVVAEKIFTTMAESGRHAD 777
FG+ QAKELLDHLESVLANEP VK GQ IVEVKPQGVSKG+ EK+ M E G D
Sbjct: 718 DFGACQAKELLDHLESVLANEPVVVKRGQHIVEVKPQGVSKGLAVEKVIHQMVEDGNPPD 777
Query: 778 FVLCIGDDRSDEDMFEIIGNATSSGVLSSNASVFACTVGQKPSKAKYYLDDAAEVVTMLE 837
V+CIGDDRSDEDMFE I + ++ L +FACTVG+KPSKAKY+LDD ++V+ +L
Sbjct: 778 MVMCIGDDRSDEDMFESILSTVTNPDLPMPPEIFACTVGRKPSKAKYFLDDVSDVLKLLG 837
Query: 838 ALAEA--SAPPSFEVGAS 853
LA A S+ P ++ +S
Sbjct: 838 GLAAATSSSKPEYQQQSS 855
|
Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 1 EC: 5 |
| >sp|Q0WUI9|TPS8_ARATH Probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 8 OS=Arabidopsis thaliana GN=TPS8 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 1117 bits (2890), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 515/841 (61%), Positives = 652/841 (77%), Gaps = 5/841 (0%)
Query: 1 MMSKSYTNLLDLASGNFPAMGPSREKKRLPRVMTVPGVISELDDDQANSVSSDVPSSVAQ 60
M+S+S N LDL+S + + + + LPRVMTVPG+I+++D D + V+S S ++
Sbjct: 1 MVSRSCANFLDLSSWDL--LDFPQTPRTLPRVMTVPGIITDVDGDTTSEVTS--TSGGSR 56
Query: 61 DRVIIVANQLPVKAKRRPDNKGWSFSWDEDSLLLQLKDGLPEDMEVIYVGSLKVDVDLSE 120
+R IIVAN LP+++KR + W F+WDEDSL LQL+DG + E +YVGSL VD++ +E
Sbjct: 57 ERKIIVANMLPLQSKRDAETGKWCFNWDEDSLQLQLRDGFSSETEFLYVGSLNVDIETNE 116
Query: 121 QDDVSQLLLDRFKCVPAFLPPDILTKFYHGFCKQHLWPLFHYMLPFSATHGGRFDRSLWE 180
Q++VSQ LL+ F CV FL ++ FY GFCK LWPLFHYMLP HG RFDR LW+
Sbjct: 117 QEEVSQKLLEEFNCVATFLSQELQEMFYLGFCKHQLWPLFHYMLPMFPDHGDRFDRRLWQ 176
Query: 181 AYVSANKIFSQRVIEVINPEDDYVWIHDYHLMVLPTFLRRRFTRLRMGFFLHSPFPSSEI 240
AYVSANKIFS RV+EVINPEDDYVWI DYHLMVLPTFLR+RF R+++GFFLHSPFPSSEI
Sbjct: 177 AYVSANKIFSDRVMEVINPEDDYVWIQDYHLMVLPTFLRKRFNRIKLGFFLHSPFPSSEI 236
Query: 241 YRTLPVREEILKALLNADLIGFHTFDYARHFLSCCSRMLGLEYQSKRGYIGLEYYGRTVG 300
YRTLPVR+EIL+ LLN DLIGFHTFDYARHFLSCCSRMLGL+Y+SKRG+IGL+Y+GRTV
Sbjct: 237 YRTLPVRDEILRGLLNCDLIGFHTFDYARHFLSCCSRMLGLDYESKRGHIGLDYFGRTVY 296
Query: 301 IKIMPVGIHMGQIESVLRLADKDWRVQELKQQFEGKTVLLGVDDMDIFKGVDLKLLAMEH 360
IKI+PVG+HMG++ESVL L + +E+++QF+GK ++LG+DDMDIFKG+ LKL+AMEH
Sbjct: 297 IKILPVGVHMGRLESVLSLDSTAAKTKEIQEQFKGKKLVLGIDDMDIFKGISLKLIAMEH 356
Query: 361 LLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDKP 420
L + + +G+ VLVQI NPAR GKD+EE + E + T +RINE +G Y+P+V ID+
Sbjct: 357 LFETYWHLKGKVVLVQIVNPARSSGKDVEEAKRETYETARRINERYGTSDYKPIVLIDRL 416
Query: 421 VTLSERAAYYTIAECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSE 480
V SE+ AYY A+C +V AVRDGMNL PY+YIVCRQG +++ +SS P+ S LVVSE
Sbjct: 417 VPRSEKTAYYAAADCCLVNAVRDGMNLVPYKYIVCRQGTRSNKAVVDSS-PRTSTLVVSE 475
Query: 481 FIGCSPSLSGAIRVNPWNIEATAEAMHEAIQMNEAEKQLRHEKHYRYVSTHDVAYWARSF 540
FIGCSPSLSGAIRVNPW+++A AEA++ A++M+E EKQLRHEKHY Y+STHDV YWA+SF
Sbjct: 476 FIGCSPSLSGAIRVNPWDVDAVAEAVNSALKMSETEKQLRHEKHYHYISTHDVGYWAKSF 535
Query: 541 FQDMERTCKDHFKRRCWGIGLSFGFRVVALDPNFRKLSIDAIVSAYLRSKSRAILFDYDG 600
QD+ER C+DH+ +RCWGIG GFRV++L P+FRKLS++ IV Y +++ RAI DYDG
Sbjct: 536 MQDLERACRDHYSKRCWGIGFGLGFRVLSLSPSFRKLSVEHIVPVYRKTQRRAIFLDYDG 595
Query: 601 TVMPQTSINKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSPCKKLGIAAEHGY 660
T++P++SI + PS V+S++ LC D NTVF+VSGRGR+ L W SPC+ LGIAAEHGY
Sbjct: 596 TLVPESSIVQDPSNEVVSVLKALCEDPNNTVFIVSGRGRESLSNWLSPCENLGIAAEHGY 655
Query: 661 FMRWSADEEWQNCGQSVDFGWIQIAEPVMKLYTESTDGSYIEIKESALVWHHRDADPGFG 720
F+RW + +EW+ C D W + EPVM+ Y E+TDG+ IE KESALVWHH+DADP FG
Sbjct: 656 FIRWKSKDEWETCYSPTDTEWRSMVEPVMRSYMEATDGTSIEFKESALVWHHQDADPDFG 715
Query: 721 SSQAKELLDHLESVLANEPAAVKSGQFIVEVKPQGVSKGVVAEKIFTTMAESGRHADFVL 780
S QAKE+LDHLESVLANEP VK GQ IVEVKPQGVSKG+ AEK+ M E G + V+
Sbjct: 716 SCQAKEMLDHLESVLANEPVVVKRGQHIVEVKPQGVSKGLAAEKVIREMVERGEPPEMVM 775
Query: 781 CIGDDRSDEDMFEIIGNATSSGVLSSNASVFACTVGQKPSKAKYYLDDAAEVVTMLEALA 840
CIGDDRSDEDMFE I + ++ L VFACTVG+KPSKAKY+LDD A+V+ +L L
Sbjct: 776 CIGDDRSDEDMFESILSTVTNPELLVQPEVFACTVGRKPSKAKYFLDDEADVLKLLRGLG 835
Query: 841 E 841
+
Sbjct: 836 D 836
|
Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 1 EC: 5 |
| >sp|O80738|TPS10_ARATH Probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 10 OS=Arabidopsis thaliana GN=TPS10 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 1113 bits (2879), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 523/847 (61%), Positives = 646/847 (76%), Gaps = 4/847 (0%)
Query: 1 MMSKSYTNLLDLASGNFPAMGPSREKKRLPRVMTVPGVISELDDDQANSVSSDVPSSVAQ 60
M SKS+ NLLDLASG+ + + + LPRVMTVPG+IS++D + SDV S +
Sbjct: 1 MGSKSFGNLLDLASGDL--LDIPQTPRYLPRVMTVPGIISDVDGYGISDGDSDVISLPCR 58
Query: 61 DRVIIVANQLPVKAKRRPDNKGWSFSWDEDSLLLQLKDGLPEDMEVIYVGSLKVDVDLSE 120
+R IIVAN LP+ K+ + W FS D DS LL LKDG + EVIYVGSLK VD+SE
Sbjct: 59 ERKIIVANFLPLNGKKDSETGKWKFSLDNDSPLLHLKDGFSPETEVIYVGSLKTHVDVSE 118
Query: 121 QDDVSQLLLDRFKCVPAFLPPDILTKFYHGFCKQHLWPLFHYMLPFSATHGGRFDRSLWE 180
QD+VS L + F CV FLP D+ KFY GFCKQ LWPLFHYMLP HG RFDR LW+
Sbjct: 119 QDEVSHNLFEEFNCVATFLPQDVHKKFYLGFCKQQLWPLFHYMLPMCPDHGERFDRGLWQ 178
Query: 181 AYVSANKIFSQRVIEVINPEDDYVWIHDYHLMVLPTFLRRRFTRLRMGFFLHSPFPSSEI 240
AYVSANKIF+ +V+ VIN E+DY+WIHDYHLMVLPTFLRRRF R+++GFFLHSPFPSSEI
Sbjct: 179 AYVSANKIFADKVMGVINLEEDYIWIHDYHLMVLPTFLRRRFHRVKLGFFLHSPFPSSEI 238
Query: 241 YRTLPVREEILKALLNADLIGFHTFDYARHFLSCCSRMLGLEYQSKRGYIGLEYYGRTVG 300
YRTLPVREE+L+ LLN DLIGFHTFDYARHFLSCC RMLGLEY+SKRG+I L+Y GRTV
Sbjct: 239 YRTLPVREELLRGLLNCDLIGFHTFDYARHFLSCCCRMLGLEYESKRGHIALDYLGRTVF 298
Query: 301 IKIMPVGIHMGQIESVLRLADKDWRVQELKQQFEGKTVLLGVDDMDIFKGVDLKLLAMEH 360
+KI+P+GIHMG++ESVL L +++E+++++ GK ++LGVDDMDIFKG+ LK+LA EH
Sbjct: 299 LKILPIGIHMGRLESVLNLPATAEKLKEIQEKYRGKKIILGVDDMDIFKGLSLKILAFEH 358
Query: 361 LLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDKP 420
LL+Q+P G+ VL+QI NPARG GKD++E + E + T KRINE +G YEPVV ID+P
Sbjct: 359 LLQQYPSMLGKIVLIQIVNPARGSGKDVQEARKETYDTVKRINERYGSHDYEPVVLIDRP 418
Query: 421 VTLSERAAYYTIAECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESS--APKKSMLVV 478
V E++AYY +AEC +V AVRDGMNL PY+Y VCRQG S S P+ S LV+
Sbjct: 419 VPRFEKSAYYALAECCIVNAVRDGMNLVPYKYTVCRQGTPSMNKSLGVSDDLPRTSTLVL 478
Query: 479 SEFIGCSPSLSGAIRVNPWNIEATAEAMHEAIQMNEAEKQLRHEKHYRYVSTHDVAYWAR 538
SEFIGCSPSLSGAIRVNPW+++A A++++ AI M++ EKQLRH+KH+ Y+STHDV YWAR
Sbjct: 479 SEFIGCSPSLSGAIRVNPWDVDAVADSLYSAITMSDFEKQLRHKKHFHYISTHDVGYWAR 538
Query: 539 SFFQDMERTCKDHFKRRCWGIGLSFGFRVVALDPNFRKLSIDAIVSAYLRSKSRAILFDY 598
SF QD+ER +DH+ +RCWG+G GFR+VAL PNFR+LSI+ VSAY RS RAI DY
Sbjct: 539 SFSQDLERASRDHYSKRCWGVGWGLGFRLVALSPNFRRLSIEQTVSAYRRSSKRAIFLDY 598
Query: 599 DGTVMPQTSINKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSPCKKLGIAAEH 658
DGT++P+TSI K PS VIS + LC+D NT+F+VSGRG+ L +W +PC+ LGIAAEH
Sbjct: 599 DGTLVPETSIVKDPSAEVISALKALCSDPNNTIFIVSGRGKVSLSEWLAPCENLGIAAEH 658
Query: 659 GYFMRWSADEEWQNCGQSVDFGWIQIAEPVMKLYTESTDGSYIEIKESALVWHHRDADPG 718
GYF RW+ +W+ G S D W ++ EP+M+LYTE+TDGS IE KESALVWHH+DADP
Sbjct: 659 GYFTRWNKSSDWETSGLSDDLEWKKVVEPIMRLYTETTDGSNIEAKESALVWHHQDADPD 718
Query: 719 FGSSQAKELLDHLESVLANEPAAVKSGQFIVEVKPQGVSKGVVAEKIFTTMAESGRHADF 778
FGS QAKELLDHLE+VL NEP V G IVEVKPQGVSKG+V KI + M E G DF
Sbjct: 719 FGSCQAKELLDHLETVLVNEPVIVNRGHQIVEVKPQGVSKGLVTGKILSRMLEDGIAPDF 778
Query: 779 VLCIGDDRSDEDMFEIIGNATSSGVLSSNASVFACTVGQKPSKAKYYLDDAAEVVTMLEA 838
V+CIGDDRSDE+MFE I S+ S + +FACTVG+KPSKAKY+LD+ ++VV +L+
Sbjct: 779 VVCIGDDRSDEEMFENISTTLSAQSSSMSTEIFACTVGRKPSKAKYFLDEVSDVVKLLQG 838
Query: 839 LAEASAP 845
LA S+P
Sbjct: 839 LANTSSP 845
|
Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 1 EC: 5 |
| >sp|Q9ZV48|TPS11_ARATH Probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 11 OS=Arabidopsis thaliana GN=TPS11 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 1038 bits (2685), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 496/852 (58%), Positives = 631/852 (74%), Gaps = 26/852 (3%)
Query: 1 MMSKSYTNLLDLASGN-FPAMGPSREKKRLPRVMTVPGVISELDDDQANSVSSDVPSSVA 59
M +S+ + L L S + + MG + R+P +T +S L+ D N + V
Sbjct: 1 MSPESWKDQLSLVSADDYRIMG----RNRIPNAVTK---LSGLETDDPNG-----GAWVT 48
Query: 60 QDRVIIVANQLPVKAKRRPDNKGWSFSWDEDSLLLQLKDGLPEDMEVIYVGSLKVDVDLS 119
+ + I+V+NQLP++A R + W F +D DSL LQLKDG P + EV+YVGSL DV S
Sbjct: 49 KPKRIVVSNQLPLRAHRDISSNKWCFEFDNDSLYLQLKDGFPPETEVVYVGSLNADVLPS 108
Query: 120 EQDDVSQLLLDRFKCVPAFLPPDILTKFYHGFCKQHLWPLFHYMLPFSATHGGRFDRSLW 179
EQ+DVSQ LL++F+CVP FLP D+L K+YHGFCK +LWP+FHY+LP + G FDRS W
Sbjct: 109 EQEDVSQFLLEKFQCVPTFLPSDLLNKYYHGFCKHYLWPIFHYLLPMTQAQGSLFDRSNW 168
Query: 180 EAYVSANKIFSQRVIEVINPEDDYVWIHDYHLMVLPTFLRRRFTRLRMGFFLHSPFPSSE 239
AY + NKIF+ ++ EV+NP+DDYVWIHDYHLM+LPTFLR RF R+++G FLHSPFPSSE
Sbjct: 169 RAYTTVNKIFADKIFEVLNPDDDYVWIHDYHLMILPTFLRNRFHRIKLGIFLHSPFPSSE 228
Query: 240 IYRTLPVREEILKALLNADLIGFHTFDYARHFLSCCSRMLGLEYQSKRGYIGLEYYGRTV 299
IYRTLPVR+EILK LN DL+GFHTFDYARHFLSCCSRMLGL+Y+SKRGYIGLEY+GRTV
Sbjct: 229 IYRTLPVRDEILKGFLNCDLVGFHTFDYARHFLSCCSRMLGLDYESKRGYIGLEYFGRTV 288
Query: 300 GIKIMPVGIHMGQIESVLRLADKDWRVQELKQQFEGKTVLLGVDDMDIFKGVDLKLLAME 359
IKI+PVGIHMGQIES+ +V+ L+++F+G V+LGVDD+D+FKG+ LK AM
Sbjct: 289 SIKILPVGIHMGQIESIKASEKTAEKVKRLRERFKGNIVMLGVDDLDMFKGISLKFWAMG 348
Query: 360 HLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRP-GYEPVVFID 418
LL+Q+ + +G+ VLVQI NPAR GKD+++++ +I+ IN FGRP GY+P+VFI+
Sbjct: 349 QLLEQNEELRGKVVLVQITNPARSSGKDVQDVEKQINLIADEINSKFGRPGGYKPIVFIN 408
Query: 419 KPVTLSERAAYYTIAECVVVTAVRDGMNLTPYEYIVCRQGVSGSESS---SESSAPKKSM 475
PV+ ++ AYY I+ECVVV AVRDGMNL PY+Y V RQG +++ E +KS+
Sbjct: 409 GPVSTLDKVAYYAISECVVVNAVRDGMNLVPYKYTVTRQGSPALDAALGFGEDDV-RKSV 467
Query: 476 LVVSEFIGCSPSLSGAIRVNPWNIEATAEAMHEAIQMNEAEKQLRHEKHYRYVSTHDVAY 535
++VSEFIGCSPSLSGAIRVNPWNI+A AM A+ M++ EK LRH+KH++Y+S+H+VAY
Sbjct: 468 IIVSEFIGCSPSLSGAIRVNPWNIDAVTNAMSSAMTMSDKEKNLRHQKHHKYISSHNVAY 527
Query: 536 WARSFFQDMERTCKDHFKRRCWGIGLSFGFRVVALDPNFRKLSIDAIVSAYLRSKSRAIL 595
WARS+ QD++R CKDH+ +R WG+G F+VVALDPNFR+L + IV AY RS SR IL
Sbjct: 528 WARSYDQDLQRACKDHYNKRFWGVGFGLFFKVVALDPNFRRLCGETIVPAYRRSSSRLIL 587
Query: 596 FDYDGTVMPQTSINKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSPCKKLGIA 655
DYDGT+M Q +++K PS +IS++N LC+D N VF+VSGRG+D L KWF C LGI+
Sbjct: 588 LDYDGTMMDQDTLDKRPSDDLISLLNRLCDDPSNLVFIVSGRGKDPLSKWFDSCPNLGIS 647
Query: 656 AEHGYFMRWSADEEWQNCGQSVDFGWIQIAEPVMKLYTESTDGSYIEIKESALVWHHRDA 715
AEHGYF RW+++ W+ D W +IA+PVM Y E+TDGS+IE KESA+VWHH++A
Sbjct: 648 AEHGYFTRWNSNSPWETSELPADLSWKKIAKPVMNHYMEATDGSFIEEKESAMVWHHQEA 707
Query: 716 DPGFGSSQAKELLDHLESVLANEPAAVKSGQFIVEVKPQGVSKGVVAEKIFTTMAES-GR 774
D FGS QAKELLDHLESVL NEP VK GQ IVEVKPQGVSKG V E + TM + G+
Sbjct: 708 DHSFGSWQAKELLDHLESVLTNEPVVVKRGQHIVEVKPQGVSKGKVVEHLIATMRNTKGK 767
Query: 775 HADFVLCIGDDRSDEDMFEII---GNATSSGVLSSNASVFACTVGQKPSKAKYYLDDAAE 831
DF+LCIGDDRSDEDMF+ I + +S G+ VFACTVGQKPSKAKYYLDD
Sbjct: 768 RPDFLLCIGDDRSDEDMFDSIVKHQDVSSIGL----EEVFACTVGQKPSKAKYYLDDTPS 823
Query: 832 VVTMLEALAEAS 843
V+ MLE LA AS
Sbjct: 824 VIKMLEWLASAS 835
|
Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 1 EC: 5 |
| >sp|Q54K57|TPSA_DICDI Alpha,alpha-trehalose-phosphate synthase [UDP-forming] A OS=Dictyostelium discoideum GN=tpsA PE=2 SV=1 | Back alignment and function description |
|---|
Score = 506 bits (1302), Expect = e-142, Method: Compositional matrix adjust.
Identities = 273/773 (35%), Positives = 436/773 (56%), Gaps = 64/773 (8%)
Query: 62 RVIIVANQLPVKAKRRPDNKGWSFSWDEDSLLLQLKDGLPEDMEVIYVGSLKVDVDLSEQ 121
R+I+V+N+LPV K+ + K WS L+ L GL + I+VG + +++ ++
Sbjct: 17 RLIVVSNRLPVSIKKESNGK-WSCKMSSGGLVAAL-SGLKSNF--IWVGWIGAEIEEDDR 72
Query: 122 DDVSQLLLDRFKCVPAFLPPDILTKFYHGFCKQHLWPLFHYMLPFSATHGGRFDRSLWEA 181
++ +LL + C+P FL + + Y+GF LWPLFHY LP +D +W +
Sbjct: 73 KEIKELLWKDYSCIPVFLSEKVANEHYNGFSNGVLWPLFHY-LPGDLD----YDDRIWNS 127
Query: 182 YVSANKIFSQRVIEVINPEDDYVWIHDYHLMVLPTFLRRRFTRLRMGFFLHSPFPSSEIY 241
YV AN+ FS V E++ P +D VW+HDYH+M+LP L+++ R+GFFLH PFPSSEI+
Sbjct: 128 YVEANEQFSSVVAEILKP-NDLVWVHDYHMMLLPEILKQKKPDARIGFFLHIPFPSSEIF 186
Query: 242 RTLPVREEILKALLNADLIGFHTFDYARHFLSCCSRMLGLEYQSKRGYIGLEYYGRTVGI 301
R LP R+EIL +LN LIGFHT+DYARHFL C+R++GLE G+ + R V +
Sbjct: 187 RVLPCRKEILLGILNCCLIGFHTYDYARHFLKSCTRIVGLETAPN----GVYFKDRFVQV 242
Query: 302 KIMPVGIHMGQIESVLRLADKDWRVQELKQQFEGKTVLLGVDDMDIFKGVDLKLLAMEHL 361
+ PVGI + L+ R++ELK+ FEG VL+G+D +D KG+ KL A+E L
Sbjct: 243 GVFPVGIDPDKFFESLKTTQVQNRIKELKESFEGTKVLIGIDRLDYIKGIPQKLQAIERL 302
Query: 362 LKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDKPV 421
+++P+W+G+ VL+Q+A P+R ++ ++++ E+ RIN +G GY P+ ++ + V
Sbjct: 303 FQKYPEWKGKLVLIQVAVPSRQDVEEYQKLKKEVEELVGRINGLYGSIGYSPIHYLFQSV 362
Query: 422 TLSERAAYYTIAECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEF 481
SE A Y I++ ++T++RDGMNL EYIVC+ +G +L++SEF
Sbjct: 363 DPSELTALYNISDAALITSIRDGMNLVAQEYIVCQTENNG-------------VLILSEF 409
Query: 482 IGCSPSLSGAIRVNPWNIEATAEAMHEAIQMNEAEKQLRHEKHYRYVSTHDVAYWARSFF 541
G + SLSGA+ +NPWN E A+++H ++ M E++ +H+ +YV+ H ++W F
Sbjct: 410 TGAAQSLSGAVMINPWNTEEVADSIHNSLLMPPEEREEKHQMLLKYVTKHTASHWGLGFV 469
Query: 542 QDMERTCKDHFKRRCWGIGLSFGFRVVALDPNFRKLSIDAIVSAYLRSKSRAILFDYDGT 601
+++ + + K +KL I+ +V Y +SK R ++F YDGT
Sbjct: 470 KELNKASSNTDKMVT-----------------IQKLDIEKVVDIYKQSKRRLLIFAYDGT 512
Query: 602 VMPQTSINKA--PSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSPCKKLGIAAEHG 659
++P ++ + PSQ +++ + L ND + V+++SGR + L +WF ++G++AE+G
Sbjct: 513 LIPYNNVPQLSRPSQELLNSFDILSNDPKTDVYILSGRDKKTLSEWFLGI-QIGLSAEYG 571
Query: 660 YFMRWSADEEWQNCGQSVDFGWIQIAEPVMKLYTESTDGSYIEIKESALVWHHRDADPGF 719
F + EW+ S+D W + P+ K +T T GS+ E KE WH+R+ADP F
Sbjct: 572 CFFKLPESTEWEQQVPSMDLSWKETIRPLFKYFTLRTPGSFFEEKEMLFTWHYRNADPIF 631
Query: 720 GSSQAKELLDHLESVLANEPAAVKSGQFIVEVKPQGVSKGVVAEKIFTTMAESGRHADFV 779
GS QA+EL HL+ N P V G + V+ ++ +K+ T G D +
Sbjct: 632 GSIQARELHLHLD----NLPLDVIVGDKTLGVRSYNINPLSSMKKVITDTIPKG--LDLI 685
Query: 780 LCIGDDRSDEDMFEIIGNATSSGVLSSNASVFACTVGQKPSKAKYYLDDAAEV 832
L IGD + S + + + +F +VG+K K Y+L D AEV
Sbjct: 686 LLIGDT-----------HIHPSELPTFDGKIFNISVGKKSVKDSYHLSDPAEV 727
|
Synthesizes trehalose 6-phosphate, the precursor for the production of trehalose, the main carbohydrate storage reserve of the dormant spore. Trehalose accumulates in both prestalk and prespore cells and then is rapidly metabolized during terminal differentiation of stalk cells, while being stored in spores, where it serves as the principal energy and carbon source for germination. Dictyostelium discoideum (taxid: 44689) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 1 EC: 5 |
| >sp|Q9FZ57|TPS2_ARATH Probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 2 OS=Arabidopsis thaliana GN=TPS2 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 457 bits (1176), Expect = e-127, Method: Compositional matrix adjust.
Identities = 274/798 (34%), Positives = 435/798 (54%), Gaps = 57/798 (7%)
Query: 62 RVIIVANQLPVKAKRRPDNKGWSFSWDEDSLLLQLKDGLPEDMEVIYVGSLKVDV-DLSE 120
R+++VAN+LPV AKR +N WS L+ L G+ + +VG VDV D E
Sbjct: 13 RLLVVANRLPVSAKRTGENS-WSLEMSPGGLVSGLL-GITSQFDTKWVGWPGVDVHDEIE 70
Query: 121 QDDVSQLLLDRFKCVPAFLPPDILTKFYHGFCKQHLWPLFHYM-LPFSATHG-GRFDRSL 178
++ +++ L + KC+P FL + ++Y+G+C LWP+ H+M LP H + +
Sbjct: 71 KNALTESLAE-MKCIPVFLN-GVFDQYYNGYCNGILWPILHHMGLPQEDQHDTNQTFETQ 128
Query: 179 WEAYVSANKIFSQRVIEVINPEDDYVWIHDYHLMVLPTFLRRRFTRLRMGFFLHSPFPSS 238
++AY AN++F +I+ E D VW HDYHLM LP +L+ ++++G+FLHSPFPSS
Sbjct: 129 YDAYKKANRMFLDVIIDNYE-EGDIVWCHDYHLMFLPQYLKEYNNKIKVGWFLHSPFPSS 187
Query: 239 EIYRTLPVREEILKALLNADLIGFHTFDYARHFLSCCSRMLGLEYQSKRGYIGLEYYGRT 298
E+Y+TLP R E+L+A+L ADL+GFHT+D+ARHFLS C+R+LG+E + G+ Y GR
Sbjct: 188 EVYKTLPSRSELLRAILAADLLGFHTYDFARHFLSTCTRILGVEGTHE----GVVYQGRV 243
Query: 299 VGIKIMPVGIHMGQIESVLRLADKDWRVQELKQQFEGKTVLLGVDDMDIFKGVDLKLLAM 358
+ + P+GI + +L + ++ EL+++F GK V+LGVD +D+ KG+ K LA
Sbjct: 244 TRVAVFPIGIDPDRFIRTCKLPEVTQQMNELQEKFAGKKVILGVDRLDMIKGIPQKYLAF 303
Query: 359 EHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFID 418
E L+++P W+ + VLVQIA P R + ++++++H RIN FG P+ +D
Sbjct: 304 EKFLEENPYWRDKVVLVQIAVPTRNDVPEYRKLKSQVHGLVGRINGRFGSVSSLPIHHLD 363
Query: 419 KPVTLSERAAYYTIAECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVV 478
V + A Y IA+ ++VT++RDGMNL YE++ C++ KK +LV+
Sbjct: 364 CSVDFNYLCAIYAIADVMLVTSLRDGMNLVSYEFVACQEA-------------KKGVLVL 410
Query: 479 SEFIGCSPSLS-GAIRVNPWNIEATAEAMHEAIQMNEAEKQLRHEKHYRYVSTHDVAYWA 537
SEF G SL GA+ VNPW++ + A+ EA+ M E++ RH +++YV TH W
Sbjct: 411 SEFAGAGQSLGVGALIVNPWDVTEVSSAIKEALNMPAEERETRHRSNFQYVCTHSAEKWG 470
Query: 538 RSFFQDMERTCKDHFKRRCWGIGLSFGFRVVALDPNFRKLSIDAIVSAYLRSKSRAILFD 597
F ++ + R + L +L ++ Y +S +R I+
Sbjct: 471 LDFMSELNGIIPES----------EMQMRKIPL-----QLPEQDVIQQYSQSNNRLIILG 515
Query: 598 YDGTVM-PQTSINKAP----SQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSPCKKL 652
+ GT+ P S K + + + LCND + TV V+S G++ L K F +
Sbjct: 516 FFGTLAEPMNSGTKEMDLKLNPELKGTLKALCNDPKTTVVVLSRSGKNILNKNFGES-NI 574
Query: 653 GIAAEHGYFMRWSADEEWQNCGQSVDFGWIQIAEPVMKLYTESTDGSYIEIKESALVWHH 712
+AAE+G F + + E N Q+V+ W+ + V K +T+ T SY E E++LVW++
Sbjct: 575 WLAAENGMFEKQTTGEWVTNMPQNVNLDWVDGVKNVFKYFTDRTPRSYFEASETSLVWNY 634
Query: 713 RDADPGFGSSQAKELLDHL-ESVLANEPAAVKSGQFIVEVKPQGVSKGVVAEKIFTTMAE 771
AD FG +QA++LL +L ++N V G VEV G +KG +I +
Sbjct: 635 EYADVEFGRAQARDLLQYLWAGPISNASVDVVRGNHSVEVHAIGETKGAAIGRILGEIVH 694
Query: 772 SGRHA---DFVLCIGDD-RSDEDMF-----EIIGNATSSGVLSSNASVFACTVGQKPSKA 822
DFV C G DED++ +I+ + + +G+ + F+ +GQ +KA
Sbjct: 695 RKSMTTPIDFVFCSGYFLEKDEDIYTFFESKILSSKSPNGLDLKKENYFSAAIGQARTKA 754
Query: 823 KYYLDDAAEVVTMLEALA 840
+Y +D A VV +L LA
Sbjct: 755 RYVIDSAHGVVDLLHKLA 772
|
Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 1 EC: 5 |
| >sp|Q54NU9|TPSB_DICDI Alpha,alpha-trehalose-phosphate synthase [UDP-forming] B OS=Dictyostelium discoideum GN=tpsB PE=3 SV=1 | Back alignment and function description |
|---|
Score = 449 bits (1156), Expect = e-125, Method: Compositional matrix adjust.
Identities = 243/715 (33%), Positives = 391/715 (54%), Gaps = 65/715 (9%)
Query: 137 AFLPPDILTKFYHGFCKQHLWPLFHYMLPFSATHGGRFDRSLWEAYVSANKIFSQRVIEV 196
FL P +Y G+CK LW L HY + F R WE YV N++F++++ V
Sbjct: 128 VFLNPRQFENYYKGYCKNGLWLLLHYQMNFI-----RMQSEWWEEYVGVNQMFAEKIASV 182
Query: 197 INPEDDYVWIHDYHLMVLPTFLRRRFT-RLRMGFFLHSPFPSSEIYRTLPVREEILKALL 255
P D +WIHDYHLM++P LR+ +GFF H+PFPS E++R LP R+E+LK +L
Sbjct: 183 WRP-SDIIWIHDYHLMLVPQMLRQLLPPEASIGFFFHAPFPSYELFRILPNRKELLKGIL 241
Query: 256 NADLIGFHTFDYARHFLSCCSRMLGLEYQSKRGYIGLEYY--GRT--VGIKIMPVGIHMG 311
+++LIGF +F+Y RHF S C+R+L LE K GLE + G T +++ P+G+
Sbjct: 242 SSNLIGFQSFEYVRHFKSSCARLLDLEVHPK----GLEIFEDGSTHFTKLQVYPIGVDYN 297
Query: 312 QIESVLRLADKDWRVQELKQQFEGKTVLLGVDDMDIFKGVDLKLLAMEHLLKQHPKWQGR 371
L L + RV+ L++ F+GK V++ D +D +GV KL E LL HP++ G+
Sbjct: 298 DFAKNLNLPEVSSRVESLRKIFKGKKVVVARDRLDQIEGVPRKLEVFEQLLNDHPEYIGK 357
Query: 372 AVLVQIANPARGRGKDLEEIQAEIHATCK----RINETFGRPGYEPVVFIDKPVTLSERA 427
V +QI P G + +E Q +H T RIN FG+ + P+ +I+K ++ E +
Sbjct: 358 LVFIQIYEPTVEEGDETDE-QKILHKTVNEMVGRINGKFGKLSFNPIEYINKKISYEELS 416
Query: 428 AYYTIAECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIGCSPS 487
A Y +A+ ++T +RDGMNLT +EY+VC++ G +L++SEF G +
Sbjct: 417 ALYKLADIALITPIRDGMNLTSHEYVVCQKDNFG-------------VLILSEFAGAARC 463
Query: 488 LSGAIRVNPWNIEATAEAMHEAIQMNEAEKQLRHEKHYRYVSTHDVAYWARSFFQDMERT 547
L G+I VNP++ + EA+ EA+ M+ +++L+H+ +Y YV + ++W + F D+
Sbjct: 464 LGGSIIVNPFSKKEIMEAIIEALNMSMHDRKLKHQINYNYVLANTSSFWGKRFLCDLNEA 523
Query: 548 CKDHFKRRCWGIGLSFGFRVVALDPNFRKLSIDAIVSAYLRSKSRAILFDYDGTVMPQTS 607
+ ++ + + + I +Y ++K R DYDGT+ P
Sbjct: 524 TQKEI-----------------METSVPRANFQEIEDSYKKAKVRVFFLDYDGTLTPLVR 566
Query: 608 I--NKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSPCKKLGIAAEHGYFMRWS 665
+ PS+ +I +++ L D RN V+V+SGR R L KW +G++ EHG F R
Sbjct: 567 LPSQAMPSKQLIDVLSKLTEDRRNEVYVISGRDRSSLEKWLGHLP-IGMSCEHGVFTRQP 625
Query: 666 ADEEWQNCGQSVDFGWIQIAEPVMKLYTESTDGSYIEIKESALVWHHRDADPGFGSSQAK 725
+ + + + W +M+ + + T GS E K+ + WH+R+ADP FG QAK
Sbjct: 626 GENQPWTESPNAEVQWKDTVLSIMQDFEDRTPGSMTETKQVNITWHYRNADPDFGQFQAK 685
Query: 726 ELLDHLESVLANEPAAVKSGQFIVEVKPQGVSKGVVAEKIFTTMAESGRHADFVLCIGDD 785
EL+ L SV P + SG+ +EVKP G++KG + + I + ADF+LCIGDD
Sbjct: 686 ELIAQLRSVANKYPLDILSGKKAIEVKPIGINKGEIVKMILQKI-----DADFILCIGDD 740
Query: 786 RSDEDMFEIIGNATSSGVLSSNASVFACTVGQKPSKAKYYLDDAAEVVTMLEALA 840
++DEDMF+ + N S ++ C ++ +KA+ ++ ++EV+T+L L+
Sbjct: 741 KTDEDMFKALYNVPS-------FTIRVCGDLEESTKARGVVESSSEVLTLLNRLS 788
|
Synthesizes trehalose 6-phosphate, the precursor for the production of trehalose, the main carbohydrate storage reserve of the dormant spore. Trehalose accumulates in both prestalk and prespore cells and then is rapidly metabolized during terminal differentiation of stalk cells, while being stored in spores, where it serves as the principal energy and carbon source for germination. Dictyostelium discoideum (taxid: 44689) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 1 EC: 5 |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 856 | ||||||
| TAIR|locus:2202290 | 851 | TPS7 "trehalose-phosphatase/sy | 0.990 | 0.996 | 0.744 | 0.0 | |
| TAIR|locus:2129425 | 862 | TPS5 "trehalose phosphatase/sy | 0.977 | 0.970 | 0.672 | 6.99999999925e-315 | |
| TAIR|locus:2200216 | 860 | ATTPS6 [Arabidopsis thaliana ( | 0.978 | 0.974 | 0.642 | 4e-303 | |
| TAIR|locus:2199847 | 867 | TPS9 "trehalose-phosphatase/sy | 0.991 | 0.979 | 0.608 | 6.2e-291 | |
| TAIR|locus:2016179 | 856 | TPS8 "trehalose-6-phosphatase | 0.980 | 0.980 | 0.600 | 7.4e-288 | |
| TAIR|locus:2195678 | 861 | TPS10 "trehalose phosphate syn | 0.984 | 0.979 | 0.605 | 1.4e-286 | |
| TAIR|locus:2054027 | 862 | TPS11 "trehalose phosphatase/s | 0.968 | 0.961 | 0.573 | 2.3e-268 | |
| DICTYBASE|DDB_G0287657 | 733 | tpsA "alpha,alpha-trehalose-ph | 0.535 | 0.624 | 0.377 | 2.4e-140 | |
| TAIR|locus:2202990 | 942 | TPS1 "trehalose-6-phosphate sy | 0.544 | 0.494 | 0.380 | 3.5e-131 | |
| ASPGD|ASPL0000037859 | 908 | orlA [Emericella nidulans (tax | 0.432 | 0.407 | 0.367 | 9.4e-122 |
| TAIR|locus:2202290 TPS7 "trehalose-phosphatase/synthase 7" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 3459 (1222.7 bits), Expect = 0., P = 0.
Identities = 636/854 (74%), Positives = 739/854 (86%)
Query: 1 MMSKSYTNLLDLASGNFPAMGPSREKKRLPRVMTVPGVISELDDDQANSVSSDVPSSVAQ 60
M+S+SYTNLLDLASGNFP MG RE++RLPRVMTVPG +SE D+DQA SVSSD PSSV+
Sbjct: 1 MISRSYTNLLDLASGNFPVMG--RERRRLPRVMTVPGNVSEFDEDQAYSVSSDNPSSVSS 58
Query: 61 DRVIIVANQLPVKAKRRPDNKGWSFSWDEDSLLLQLKDGLPEDMEVIYVGSLKVDVDLSE 120
DR+IIVAN+LP+KA++R N WSFSWD+DSL LQLKDGLPEDME++YVGSL VDVD +E
Sbjct: 59 DRMIIVANRLPLKAEKR--NGSWSFSWDQDSLYLQLKDGLPEDMEILYVGSLSVDVDSNE 116
Query: 121 QDDVSQLLLDRFKCVPAFLPPDILTKFYHGFCKQHLWPLFHYMLPFSATHGGRFDRSLWE 180
QDDV+Q+LLD+FKCVP F PPD+ +KFY GFCK+ +WPLFHYMLPFSA HGGRFDRSLWE
Sbjct: 117 QDDVAQILLDKFKCVPTFFPPDLQSKFYDGFCKRQIWPLFHYMLPFSADHGGRFDRSLWE 176
Query: 181 AYVSANKIFSQRVIEVINPEDDYVWIHDYHLMVLPXXXXXXXXXXXMGFFLHSPFPSSEI 240
AYV+ NK+F Q+VIEVINP+DD+VWIHDYHLMVLP MGFFLHSPFPSSEI
Sbjct: 177 AYVATNKLFFQKVIEVINPDDDFVWIHDYHLMVLPTFLRRRFNRIRMGFFLHSPFPSSEI 236
Query: 241 YRTLPVREEILKALLNADLIGFHTFDYARHFLSCCSRMLGLEYQSKRGYIGLEYYGRTVG 300
YR+LPVREEILKALLN+DLIGFHTFDYARHFL+CCSRMLGLEYQSKRGYIGLEYYGRTVG
Sbjct: 237 YRSLPVREEILKALLNSDLIGFHTFDYARHFLTCCSRMLGLEYQSKRGYIGLEYYGRTVG 296
Query: 301 IKIMPVGIHMGQIESVLRLADKDWRVQELKQQFEGKTVLLGVDDMDIFKGVDLKLLAMEH 360
IKIMPVGI+MG+I+SV+R ++++ +V EL+ +FEGKTVLLG+DDMDIFKG++LKLLAME
Sbjct: 297 IKIMPVGINMGRIQSVMRYSEEEGKVMELRNRFEGKTVLLGIDDMDIFKGINLKLLAMEQ 356
Query: 361 LLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDKP 420
+L+QHP W+GRAVLVQI NPARG+G D+EEI+ EI +C+RIN FG+PGY+P+++ID P
Sbjct: 357 MLRQHPNWRGRAVLVQIVNPARGKGIDVEEIRGEIEESCRRINGEFGKPGYQPIIYIDTP 416
Query: 421 VTLSERAAYYTIAECVVVTAVRDGMNLTPYEYIVCRQGVXXXXXXXXXXAPKKSMLVVSE 480
V+++E AYY IAECVVVTAVRDGMNLTPYEYIVCRQG+ PKKSMLV SE
Sbjct: 417 VSINEINAYYHIAECVVVTAVRDGMNLTPYEYIVCRQGLLGSESDFS--GPKKSMLVASE 474
Query: 481 FIGCSPSLSGAIRVNPWNIEATAEAMHEAIQMNEAEKQLRHEKHYRYVSTHDVAYWARSF 540
FIGCSPSLSGAIRVNPWN+EAT EA++EA+ M++AEKQLRHEKH+RYVSTHDVAYW+RSF
Sbjct: 475 FIGCSPSLSGAIRVNPWNVEATGEALNEALSMSDAEKQLRHEKHFRYVSTHDVAYWSRSF 534
Query: 541 FQDMERTCKDHFKRRCWGIGLSFGFRVVALDPNFRKLSIDAIVSAYLRSKSRAILFDYDG 600
QD+ER C DHFK+RCWG+G+SFGFRVVALDPNFRKLSI IVS Y R+KSRAIL DYDG
Sbjct: 535 LQDLERICVDHFKKRCWGMGISFGFRVVALDPNFRKLSIPCIVSDYKRAKSRAILLDYDG 594
Query: 601 TVMPQTSINKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSPCKKLGIAAEHGY 660
T+MPQ SINKAPSQ V++ ++ LC D +N++F+VSGRGR+ L KWF+PCKK+GIAAEHGY
Sbjct: 595 TLMPQNSINKAPSQEVLNFLDALCEDKKNSIFIVSGRGRESLSKWFTPCKKIGIAAEHGY 654
Query: 661 FMRWSADEEWQNCGQSVDFGWIQIAEPVMKLYTESTDGSYIEIKESALVWHHRDADPGFG 720
F++WS EEW+ CGQS DFGW+QI EPVMK YTESTDGS IEIKESALVW +RDADPGFG
Sbjct: 655 FLKWSGSEEWETCGQSSDFGWMQIVEPVMKQYTESTDGSSIEIKESALVWQYRDADPGFG 714
Query: 721 SSQAKELLDHLESVLANEPAAVKSGQFIVEVKPQGVSKGVVAEKIFTTMAESGRHADFVL 780
S QAKE+L+HLESVLANEP AVKSG +IVEVKPQGVSKG V+EKIF++MA G+ DFVL
Sbjct: 715 SLQAKEMLEHLESVLANEPVAVKSGHYIVEVKPQGVSKGSVSEKIFSSMAGKGKPVDFVL 774
Query: 781 CIGDDRSDEDMFEIIGNATSSGVLSSNASVFACTVGQKPSKAKYYLDDAAEVVTMLEALA 840
CIGDDRSDEDMFE IGNA S +L NA VFACTVGQKPSKAKYYLDD EV MLE+LA
Sbjct: 775 CIGDDRSDEDMFEAIGNAMSKRLLCDNALVFACTVGQKPSKAKYYLDDTTEVTCMLESLA 834
Query: 841 EASAPPSFEVGASD 854
EAS +F + D
Sbjct: 835 EASEASNFSMRELD 848
|
|
| TAIR|locus:2129425 TPS5 "trehalose phosphatase/synthase 5" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 3020 (1068.2 bits), Expect = 7.0e-315, P = 7.0e-315
Identities = 567/843 (67%), Positives = 675/843 (80%)
Query: 1 MMSKSYTNLLDLASGNFPAMGPSREKKRLPRVMTVPGVISELDDDQ-ANSVSSDVPSSVA 59
M+S+SY+NLLDLASGNF + SREKKR PRV TV GV+SELDDD +NSV SD PSSV
Sbjct: 1 MVSRSYSNLLDLASGNFHSF--SREKKRFPRVATVTGVLSELDDDNNSNSVCSDAPSSVT 58
Query: 60 QDRVIIVANQLPVKAKRRPDNKGWSFSWDEDSLLLQLKDGLPEDMEVIYVGSLKVDVDLS 119
QDR+IIV NQLP+K+ R K SFSWD DSLLLQLKDG+ EDMEV+Y+G LK +D
Sbjct: 59 QDRIIIVGNQLPIKSHRNSAGK-LSFSWDNDSLLLQLKDGMREDMEVVYIGCLKEQIDTV 117
Query: 120 EQDDVSQLLLDRFKCVPAFLPPDILTKFYHGFCKQHLWPLFHYMLPFSATHGGRFDRSLW 179
EQDDVSQ LL+ FKCVPA++PP++ TK+YHGFCKQHLWPLFHYMLP + GGRFDRSLW
Sbjct: 118 EQDDVSQRLLENFKCVPAYIPPELFTKYYHGFCKQHLWPLFHYMLPLTPDLGGRFDRSLW 177
Query: 180 EAYVSANKIFSQRVIEVINPEDDYVWIHDYHLMVLPXXXXXXXXXXXMGFFLHSPFPSSE 239
+AY+S NKIF+ +V+EVI+P+DD+VW+HDYHLMVLP +GFFLHSPFPSSE
Sbjct: 178 QAYLSVNKIFADKVMEVISPDDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSE 237
Query: 240 IYRTLPVREEILKALLNADLIGFHTFDYARHFLSCCSRMLGLEYQSKRGYIGLEYYGRTV 299
IYRTLPVR E+L+ALLNADLIGFHTFDYARHFLSCCSRMLGL YQSKRG IGLEYYGRTV
Sbjct: 238 IYRTLPVRNELLRALLNADLIGFHTFDYARHFLSCCSRMLGLSYQSKRGTIGLEYYGRTV 297
Query: 300 GIKIMPVGIHMGQIESVLRLADKDWRVQELKQQFEGKTVLLGVDDMDIFKGVDLKLLAME 359
IKI+PVGIH+ Q++S+L L + +V EL+ QF + VLLGVDDMDIFKG+ LKLLAME
Sbjct: 298 SIKILPVGIHISQLQSILNLPETQTKVAELRDQFLDQKVLLGVDDMDIFKGISLKLLAME 357
Query: 360 HLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDK 419
LL QHP+ +GR VLVQIANPARGRGKD++E+Q+E AT KRINE FGRPGY+PVV ID
Sbjct: 358 QLLTQHPEKRGRVVLVQIANPARGRGKDVQEVQSETEATVKRINEMFGRPGYQPVVLIDT 417
Query: 420 PVTLSERAAYYTIAECVVVTAVRDGMNLTPYEYIVCRQG--VXXXXXXXXXXAPKKSMLV 477
P+ ER AYY IAEC +VTAVRDGMNL PYEYI+CRQG A KKSMLV
Sbjct: 418 PLQFFERIAYYVIAECCLVTAVRDGMNLIPYEYIICRQGNPKLNETIGLDPSAAKKSMLV 477
Query: 478 VSEFIGCSPSLSGAIRVNPWNIEATAEAMHEAIQMNEAEKQLRHEKHYRYVSTHDVAYWA 537
VSEFIGCSPSLSGAIRVNPWNI+A EAM A+ ++EAEKQ+RHEKH++YVSTHDVAYWA
Sbjct: 478 VSEFIGCSPSLSGAIRVNPWNIDAVTEAMDYALIVSEAEKQMRHEKHHKYVSTHDVAYWA 537
Query: 538 RSFFQDMERTCKDHFKRRCWGIGLSFGFRVVALDPNFRKLSIDAIVSAYLRSKSRAILFD 597
RSF QD+ER C DH ++RCWGIG GFRVVALDP+F+KLSI+ IVSAY R+K+RAIL D
Sbjct: 538 RSFIQDLERACGDHVRKRCWGIGFGLGFRVVALDPSFKKLSIEHIVSAYKRTKNRAILLD 597
Query: 598 YDGTVMPQTSINKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSPCKKLGIAAE 657
YDGT++ SI P++ I I+N L +D +N V++VSG+ R L +WFS C LG+ AE
Sbjct: 598 YDGTMVQPGSIRTTPTRETIEILNNLSSDPKNIVYLVSGKDRRTLTEWFSSCDDLGLGAE 657
Query: 658 HGYFMRWSADEEWQNCGQSVDFGWIQIAEPVMKLYTESTDGSYIEIKESALVWHHRDADP 717
HGYF+R + +W+ F W QIAEPVM+LYTE+TDGS IE KE+ALVW+++ ADP
Sbjct: 658 HGYFIRPNDGTDWETSSLVSGFEWKQIAEPVMRLYTETTDGSTIETKETALVWNYQFADP 717
Query: 718 GFGSSQAKELLDHLESVLANEPAAVKSGQFIVEVKPQGVSKGVVAEKIFTTMAESGRHAD 777
FGS QAKEL++HLESVL N+P +VK+GQ +VEVKPQGV+KG+VAE++ TTM E G+ D
Sbjct: 718 DFGSCQAKELMEHLESVLTNDPVSVKTGQQLVEVKPQGVNKGLVAERLLTTMQEKGKLLD 777
Query: 778 FVLCIGDDRSDEDMFEIIGNATSSGVLSSNASVFACTVGQKPSKAKYYLDDAAEVVTMLE 837
F+LC+GDDRSDEDMFE+I +A LS A +FACTVGQKPSKAKYYLDD AE++ ML+
Sbjct: 778 FILCVGDDRSDEDMFEVIMSAKDGPALSPVAEIFACTVGQKPSKAKYYLDDTAEIIRMLD 837
Query: 838 ALA 840
LA
Sbjct: 838 GLA 840
|
|
| TAIR|locus:2200216 ATTPS6 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 2909 (1029.1 bits), Expect = 4.0e-303, P = 4.0e-303
Identities = 552/859 (64%), Positives = 673/859 (78%)
Query: 1 MMSKSYTNLLDLASGNFPAMGPSREKKRLPRVMTVPGVISELDDDQANS----------V 50
M+S+SY+NLL+LASG+ P G R +++PR+M V G++S +D+D ++ V
Sbjct: 1 MVSRSYSNLLELASGDSPTFG--RMNRQIPRIMAVAGIMSNIDNDSKDTDLSPKDRIIIV 58
Query: 51 SSDVPSSVAQDRVIIVANQLPVKAKRRPDNKGWSFSWDEDSLLLQLKDGLPED-MEVIYV 109
++++P AQ RV N + +KGW+FSWDE+SLLLQLKDGL ++ +EVIYV
Sbjct: 59 ANELPIR-AQRRVD--GNGSGSSSSSTCCSKGWNFSWDENSLLLQLKDGLGDEAIEVIYV 115
Query: 110 GSLKVDVDLSEQDDVSQLLLDRFKCVPAFLPPDILTKFYHGFCKQHLWPLFHYMLPFSAT 169
G LK ++ L+EQ++V Q+LL+ FKCVP FLP D+ T++YHGFCKQ LWPLFHYMLP S
Sbjct: 116 GCLKEEIPLNEQEEVYQILLESFKCVPTFLPLDLYTRYYHGFCKQQLWPLFHYMLPLSPD 175
Query: 170 HGGRFDRSLWEAYVSANKIFSQRVIEVINPEDDYVWIHDYHLMVLPXXXXXXXXXXXMGF 229
GGRFDR+LW+AYVS NKIF+ R++EVINPEDD+VWIHDYHLMVLP +GF
Sbjct: 176 LGGRFDRTLWQAYVSVNKIFADRIMEVINPEDDFVWIHDYHLMVLPTFLRKRFNRVKLGF 235
Query: 230 FLHSPFPSSEIYRTLPVREEILKALLNADLIGFHTFDYARHFLSCCSRMLGLEYQSKRGY 289
FLHSPFPSSEIY+TLP+REE+L+ALLN+DLIGFHTFDYARHFLSCCSRMLGL Y+SKRGY
Sbjct: 236 FLHSPFPSSEIYKTLPIREELLRALLNSDLIGFHTFDYARHFLSCCSRMLGLTYESKRGY 295
Query: 290 IGLEYYGRTVGIKIMPVGIHMGQIESVLRLADKDWRVQELKQQF--EGKTVLLGVDDMDI 347
IGLEYYGRTV IKI+PVGIHMGQ++SVL L + + +V EL +++ +G+T+LLGVDDMDI
Sbjct: 296 IGLEYYGRTVSIKILPVGIHMGQLQSVLSLPETERKVGELIERYGRKGRTMLLGVDDMDI 355
Query: 348 FKGVDLKLLAMEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFG 407
FKG+ LKLLAME LL QHP+WQG+ VLVQIANPARG+GKD++E+QAE ++T KRINETFG
Sbjct: 356 FKGITLKLLAMEQLLMQHPEWQGKVVLVQIANPARGKGKDVKEMQAETYSTVKRINETFG 415
Query: 408 RPGYEPVVFIDKPVTLSERAAYYTIAECVVVTAVRDGMNLTPYEYIVCRQGVXXXXXXXX 467
RPGY+P+V ID P+ ER AYY +AEC +VTAVRDGMNL PYEYIV RQG
Sbjct: 416 RPGYDPIVLIDAPLKFYERVAYYVVAECCLVTAVRDGMNLIPYEYIVSRQGNEKLDKILK 475
Query: 468 XXAP---KKSMLVVSEFIGCSPSLSGAIRVNPWNIEATAEAMHEAIQMNEAEKQLRHEKH 524
A KKSMLVVSEFIGCSPSLSGAIRVNPWN++A A+AM A+++ E EKQLRHEKH
Sbjct: 476 LEANNRNKKSMLVVSEFIGCSPSLSGAIRVNPWNVDAVADAMDSALEVAEPEKQLRHEKH 535
Query: 525 YRYVSTHDVAYWARSFFQDMERTCKDHFKRRCWGIGLSFGFRVVALDPNFRKLSIDAIVS 584
Y+YVSTHDV YWARSF QD+ER+C +H +RRCWGIG FRVVALD +FRKLS++ IVS
Sbjct: 536 YKYVSTHDVGYWARSFLQDLERSCGEHGRRRCWGIGFGLSFRVVALDQSFRKLSMEHIVS 595
Query: 585 AYLRSKSRAILFDYDGTVMPQTSINKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGK 644
AY R+K+RAIL DYD T+MPQ SI+K PS I I+NTLC D N VF+VS + R+ L
Sbjct: 596 AYKRTKTRAILLDYDDTLMPQGSIDKRPSSKSIDILNTLCRDKGNLVFIVSAKSRETLSD 655
Query: 645 WFSPCKKLGIAAEHGYFMRWSADEEWQNCGQSVDFGWIQIAEPVMKLYTESTDGSYIEIK 704
WFSPC+KLGIAAEHGYF+R EW+NC +VD W QIAEPVM+LYTE+TDGS IE K
Sbjct: 656 WFSPCEKLGIAAEHGYFLRLRKAVEWENCVAAVDCSWKQIAEPVMELYTETTDGSTIEDK 715
Query: 705 ESALVWHHRDADPGFGSSQAKELLDHLESVLANEPAAVKSGQFIVEVKPQGVSKGVVAEK 764
E+ALVW + DADP FGS QAKELLDHLESVLANEP VK GQ VEVKPQGVSKG++A +
Sbjct: 716 ETALVWSYEDADPDFGSCQAKELLDHLESVLANEPVTVKRGQNYVEVKPQGVSKGLIARR 775
Query: 765 IFTTMAESGRHADFVLCIGDDRSDEDMFEIIGNATSSGVLSSNASVFACTVGQKPSKAKY 824
+ + M E G +FVLCIGDDRSDEDMFE+I ++T ++ A +FACTVGQKPSKAKY
Sbjct: 776 MLSMMQERGTLPEFVLCIGDDRSDEDMFEVICSSTEGPSIAPRAEIFACTVGQKPSKAKY 835
Query: 825 YLDDAAEVVTMLEALAEAS 843
YLDD E+V ++ LA +
Sbjct: 836 YLDDTTEIVRLMHGLASVT 854
|
|
| TAIR|locus:2199847 TPS9 "trehalose-phosphatase/synthase 9" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 2794 (988.6 bits), Expect = 6.2e-291, P = 6.2e-291
Identities = 523/859 (60%), Positives = 655/859 (76%)
Query: 1 MMSKSYTNLLDLASGNFPAMGPSREKKRLPRVMTVPGVISELDDDQANSVSSDVPSS-VA 59
M+S+S N LDLAS + + + ++ LPRVMTVPG+ISELD ++ SSDV SS +
Sbjct: 1 MVSRSCANFLDLASWDL--LDFPQTQRALPRVMTVPGIISELDGGYSDG-SSDVNSSNSS 57
Query: 60 QDRVIIVANQLPVKAKRRPDNKGWSFSWDEDSLLLQLKDGLPEDMEVIYVGSLKVDVDLS 119
++R IIVAN LP++AKR + W FSWDEDSLLLQL+DG D E +Y+GSL D+ +S
Sbjct: 58 RERKIIVANMLPLQAKRDTETGQWCFSWDEDSLLLQLRDGFSSDTEFVYIGSLNADIGIS 117
Query: 120 EQDDVS-QLLLDRFKCVPAFLPPDILTKFYHGFCKQHLWPLFHYMLPFSATHGGRFDRSL 178
EQ++VS +LLLD F CVP FLP ++ KFY GFCK HLWPLFHYMLP HG RFDR L
Sbjct: 118 EQEEVSHKLLLD-FNCVPTFLPKEMQEKFYLGFCKHHLWPLFHYMLPMFPDHGDRFDRRL 176
Query: 179 WEAYVSANKIFSQRVIEVINPEDDYVWIHDYHLMVLPXXXXXXXXXXXMGFFLHSPFPSS 238
W+AYVSANKIFS RV+EVINPE+DYVWIHDYHLMVLP +GFFLHSPFPSS
Sbjct: 177 WQAYVSANKIFSDRVMEVINPEEDYVWIHDYHLMVLPTFLRKRFNRIKLGFFLHSPFPSS 236
Query: 239 EIYRTLPVREEILKALLNADLIGFHTFDYARHFLSCCSRMLGLEYQSKRGYIGLEYYGRT 298
EIYRTLPVR+++L+ LLN DLIGFHTFDYARHFLSCCSRMLGL+Y+SKRG+IGL+Y+GRT
Sbjct: 237 EIYRTLPVRDDLLRGLLNCDLIGFHTFDYARHFLSCCSRMLGLDYESKRGHIGLDYFGRT 296
Query: 299 VGIKIMPVGIHMGQIESVLRLADKDWRVQELKQQFEGKTVLLGVDDMDIFKGVDLKLLAM 358
V IKI+PVGIHMG++ESVL L +++E+++QF+GK ++LGVDDMDIFKG+ LKL+AM
Sbjct: 297 VFIKILPVGIHMGRLESVLNLPSTAAKMKEIQEQFKGKKLILGVDDMDIFKGISLKLIAM 356
Query: 359 EHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFID 418
E L + + +G+ VL+QI NPAR GKD+EE + E ++T KRINE +G GY+PV+ ID
Sbjct: 357 ERLFETYWHMRGKLVLIQIVNPARATGKDVEEAKKETYSTAKRINERYGSAGYQPVILID 416
Query: 419 KPVTLSERAAYYTIAECVVVTAVRDGMNLTPYEYIVCRQGV--XXXXXXXXXXAPKKSML 476
+ V E+ AYY +A+C +V AVRDGMNL PY+YI+CRQG + + SML
Sbjct: 417 RLVPRYEKTAYYAMADCCLVNAVRDGMNLVPYKYIICRQGTPGMDKAMGISHDSARTSML 476
Query: 477 VVSEFIGCSPSLSGAIRVNPWNIEATAEAMHEAIQMNEAEKQLRHEKHYRYVSTHDVAYW 536
VVSEFIGCSPSLSGAIRVNPW+++A AEA++ A+ M E EK+LRHEKHY YVSTHDV YW
Sbjct: 477 VVSEFIGCSPSLSGAIRVNPWDVDAVAEAVNLALTMGETEKRLRHEKHYHYVSTHDVGYW 536
Query: 537 ARSFFQDMERTCKDHFKRRCWGIGLSFGFRVVALDPNFRKLSIDAIVSAYLRSKSRAILF 596
A+SF QD+ER C++H+ +RCWGIG FRV++L P+FRKLSID IVS Y ++ RAI
Sbjct: 537 AKSFMQDLERACREHYNKRCWGIGFGLSFRVLSLSPSFRKLSIDHIVSTYRNTQRRAIFL 596
Query: 597 DYDGTVMPQTSINKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSPCKKLGIAA 656
DYDGT++P++SI K P+ V+S++ +LC D +NTVFVVSGRG + L W SPC+ LGIAA
Sbjct: 597 DYDGTLVPESSIIKTPNAEVLSVLKSLCGDPKNTVFVVSGRGWESLSDWLSPCENLGIAA 656
Query: 657 EHGYFMRWSADEEWQNCGQSVDFGWIQIAEPVMKLYTESTDGSYIEIKESALVWHHRDAD 716
EHGYF+RWS+ +EW+ C S + W + EPVM+ Y ++TDGS IE KESALVWHH+DAD
Sbjct: 657 EHGYFIRWSSKKEWETCYSSAEAEWKTMVEPVMRSYMDATDGSTIEYKESALVWHHQDAD 716
Query: 717 PGFGSSQAKELLDHLESVLANEPAAVKSGQFIVEVKPQGVSKGVVAEKIFTTMAESGRHA 776
P FG+ QAKELLDHLESVLANEP VK GQ IVEVKPQGVSKG+ EK+ M E G
Sbjct: 717 PDFGACQAKELLDHLESVLANEPVVVKRGQHIVEVKPQGVSKGLAVEKVIHQMVEDGNPP 776
Query: 777 DFVLCIGDDRSDEDMFEIIGNATSSGVLSSNASVFACTVGQKPSKAKYYLDDAAEVVTML 836
D V+CIGDDRSDEDMFE I + ++ L +FACTVG+KPSKAKY+LDD ++V+ +L
Sbjct: 777 DMVMCIGDDRSDEDMFESILSTVTNPDLPMPPEIFACTVGRKPSKAKYFLDDVSDVLKLL 836
Query: 837 EALAEA--SAPPSFEVGAS 853
LA A S+ P ++ +S
Sbjct: 837 GGLAAATSSSKPEYQQQSS 855
|
|
| TAIR|locus:2016179 TPS8 "trehalose-6-phosphatase synthase S8" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 2765 (978.4 bits), Expect = 7.4e-288, P = 7.4e-288
Identities = 507/844 (60%), Positives = 640/844 (75%)
Query: 1 MMSKSYTNLLDLASGNFPAMGPSREKKRLPRVMTVPGVISELDDDQANSVSSDVPSSVAQ 60
M+S+S N LDL+S + + + + LPRVMTVPG+I+++D D + V+S S ++
Sbjct: 1 MVSRSCANFLDLSSWDL--LDFPQTPRTLPRVMTVPGIITDVDGDTTSEVTST--SGGSR 56
Query: 61 DRVIIVANQLPVKAKRRPDNKGWSFSWDEDSLLLQLKDGLPEDMEVIYVGSLKVDVDLSE 120
+R IIVAN LP+++KR + W F+WDEDSL LQL+DG + E +YVGSL VD++ +E
Sbjct: 57 ERKIIVANMLPLQSKRDAETGKWCFNWDEDSLQLQLRDGFSSETEFLYVGSLNVDIETNE 116
Query: 121 QDDVSQLLLDRFKCVPAFLPPDILTKFYHGFCKQHLWPLFHYMLPFSATHGGRFDRSLWE 180
Q++VSQ LL+ F CV FL ++ FY GFCK LWPLFHYMLP HG RFDR LW+
Sbjct: 117 QEEVSQKLLEEFNCVATFLSQELQEMFYLGFCKHQLWPLFHYMLPMFPDHGDRFDRRLWQ 176
Query: 181 AYVSANKIFSQRVIEVINPEDDYVWIHDYHLMVLPXXXXXXXXXXXMGFFLHSPFPSSEI 240
AYVSANKIFS RV+EVINPEDDYVWI DYHLMVLP +GFFLHSPFPSSEI
Sbjct: 177 AYVSANKIFSDRVMEVINPEDDYVWIQDYHLMVLPTFLRKRFNRIKLGFFLHSPFPSSEI 236
Query: 241 YRTLPVREEILKALLNADLIGFHTFDYARHFLSCCSRMLGLEYQSKRGYIGLEYYGRTVG 300
YRTLPVR+EIL+ LLN DLIGFHTFDYARHFLSCCSRMLGL+Y+SKRG+IGL+Y+GRTV
Sbjct: 237 YRTLPVRDEILRGLLNCDLIGFHTFDYARHFLSCCSRMLGLDYESKRGHIGLDYFGRTVY 296
Query: 301 IKIMPVGIHMGQIESVLRLADKDWRVQELKQQFEGKTVLLGVDDMDIFKGVDLKLLAMEH 360
IKI+PVG+HMG++ESVL L + +E+++QF+GK ++LG+DDMDIFKG+ LKL+AMEH
Sbjct: 297 IKILPVGVHMGRLESVLSLDSTAAKTKEIQEQFKGKKLVLGIDDMDIFKGISLKLIAMEH 356
Query: 361 LLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDKP 420
L + + +G+ VLVQI NPAR GKD+EE + E + T +RINE +G Y+P+V ID+
Sbjct: 357 LFETYWHLKGKVVLVQIVNPARSSGKDVEEAKRETYETARRINERYGTSDYKPIVLIDRL 416
Query: 421 VTLSERAAYYTIAECVVVTAVRDGMNLTPYEYIVCRQGVXXXXXXXXXXAPKKSMLVVSE 480
V SE+ AYY A+C +V AVRDGMNL PY+YIVCRQG +P+ S LVVSE
Sbjct: 417 VPRSEKTAYYAAADCCLVNAVRDGMNLVPYKYIVCRQGTRSNKAVVDS-SPRTSTLVVSE 475
Query: 481 FIGCSPSLSGAIRVNPWNIEATAEAMHEAIQMNEAEKQLRHEKHYRYVSTHDVAYWARSF 540
FIGCSPSLSGAIRVNPW+++A AEA++ A++M+E EKQLRHEKHY Y+STHDV YWA+SF
Sbjct: 476 FIGCSPSLSGAIRVNPWDVDAVAEAVNSALKMSETEKQLRHEKHYHYISTHDVGYWAKSF 535
Query: 541 FQDMERTCKDHFKRRCWGIGLSFGFRVVALDPNFRKLSIDAIVSAYLRSKSRAILFDYDG 600
QD+ER C+DH+ +RCWGIG GFRV++L P+FRKLS++ IV Y +++ RAI DYDG
Sbjct: 536 MQDLERACRDHYSKRCWGIGFGLGFRVLSLSPSFRKLSVEHIVPVYRKTQRRAIFLDYDG 595
Query: 601 TVMPQTSINKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSPCKKLGIAAEHGY 660
T++P++SI + PS V+S++ LC D NTVF+VSGRGR+ L W SPC+ LGIAAEHGY
Sbjct: 596 TLVPESSIVQDPSNEVVSVLKALCEDPNNTVFIVSGRGRESLSNWLSPCENLGIAAEHGY 655
Query: 661 FMRWSADEEWQNCGQSVDFGWIQIAEPVMKLYTESTDGSYIEIKESALVWHHRDADPGFG 720
F+RW + +EW+ C D W + EPVM+ Y E+TDG+ IE KESALVWHH+DADP FG
Sbjct: 656 FIRWKSKDEWETCYSPTDTEWRSMVEPVMRSYMEATDGTSIEFKESALVWHHQDADPDFG 715
Query: 721 SSQAKELLDHLESVLANEPAAVKSGQFIVEVKPQGVSKGVVAEKIFTTMAESGRHADFVL 780
S QAKE+LDHLESVLANEP VK GQ IVEVKPQGVSKG+ AEK+ M E G + V+
Sbjct: 716 SCQAKEMLDHLESVLANEPVVVKRGQHIVEVKPQGVSKGLAAEKVIREMVERGEPPEMVM 775
Query: 781 CIGDDRSDEDMFEIIGNATSSGVLSSNASVFACTVGQKPSKAKYYLDDAAEVVTMLEALA 840
CIGDDRSDEDMFE I + ++ L VFACTVG+KPSKAKY+LDD A+V+ +L L
Sbjct: 776 CIGDDRSDEDMFESILSTVTNPELLVQPEVFACTVGRKPSKAKYFLDDEADVLKLLRGLG 835
Query: 841 EASA 844
++S+
Sbjct: 836 DSSS 839
|
|
| TAIR|locus:2195678 TPS10 "trehalose phosphate synthase" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 2753 (974.2 bits), Expect = 1.4e-286, P = 1.4e-286
Identities = 513/847 (60%), Positives = 634/847 (74%)
Query: 1 MMSKSYTNLLDLASGNFPAMGPSREKKRLPRVMTVPGVISELDDDQANSVSSDVPSSVAQ 60
M SKS+ NLLDLASG+ + + + LPRVMTVPG+IS++D + SDV S +
Sbjct: 1 MGSKSFGNLLDLASGDL--LDIPQTPRYLPRVMTVPGIISDVDGYGISDGDSDVISLPCR 58
Query: 61 DRVIIVANQLPVKAKRRPDNKGWSFSWDEDSLLLQLKDGLPEDMEVIYVGSLKVDVDLSE 120
+R IIVAN LP+ K+ + W FS D DS LL LKDG + EVIYVGSLK VD+SE
Sbjct: 59 ERKIIVANFLPLNGKKDSETGKWKFSLDNDSPLLHLKDGFSPETEVIYVGSLKTHVDVSE 118
Query: 121 QDDVSQLLLDRFKCVPAFLPPDILTKFYHGFCKQHLWPLFHYMLPFSATHGGRFDRSLWE 180
QD+VS L + F CV FLP D+ KFY GFCKQ LWPLFHYMLP HG RFDR LW+
Sbjct: 119 QDEVSHNLFEEFNCVATFLPQDVHKKFYLGFCKQQLWPLFHYMLPMCPDHGERFDRGLWQ 178
Query: 181 AYVSANKIFSQRVIEVINPEDDYVWIHDYHLMVLPXXXXXXXXXXXMGFFLHSPFPSSEI 240
AYVSANKIF+ +V+ VIN E+DY+WIHDYHLMVLP +GFFLHSPFPSSEI
Sbjct: 179 AYVSANKIFADKVMGVINLEEDYIWIHDYHLMVLPTFLRRRFHRVKLGFFLHSPFPSSEI 238
Query: 241 YRTLPVREEILKALLNADLIGFHTFDYARHFLSCCSRMLGLEYQSKRGYIGLEYYGRTVG 300
YRTLPVREE+L+ LLN DLIGFHTFDYARHFLSCC RMLGLEY+SKRG+I L+Y GRTV
Sbjct: 239 YRTLPVREELLRGLLNCDLIGFHTFDYARHFLSCCCRMLGLEYESKRGHIALDYLGRTVF 298
Query: 301 IKIMPVGIHMGQIESVLRLADKDWRVQELKQQFEGKTVLLGVDDMDIFKGVDLKLLAMEH 360
+KI+P+GIHMG++ESVL L +++E+++++ GK ++LGVDDMDIFKG+ LK+LA EH
Sbjct: 299 LKILPIGIHMGRLESVLNLPATAEKLKEIQEKYRGKKIILGVDDMDIFKGLSLKILAFEH 358
Query: 361 LLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDKP 420
LL+Q+P G+ VL+QI NPARG GKD++E + E + T KRINE +G YEPVV ID+P
Sbjct: 359 LLQQYPSMLGKIVLIQIVNPARGSGKDVQEARKETYDTVKRINERYGSHDYEPVVLIDRP 418
Query: 421 VTLSERAAYYTIAECVVVTAVRDGMNLTPYEYIVCRQGVXXXXXXXXXX--APKKSMLVV 478
V E++AYY +AEC +V AVRDGMNL PY+Y VCRQG P+ S LV+
Sbjct: 419 VPRFEKSAYYALAECCIVNAVRDGMNLVPYKYTVCRQGTPSMNKSLGVSDDLPRTSTLVL 478
Query: 479 SEFIGCSPSLSGAIRVNPWNIEATAEAMHEAIQMNEAEKQLRHEKHYRYVSTHDVAYWAR 538
SEFIGCSPSLSGAIRVNPW+++A A++++ AI M++ EKQLRH+KH+ Y+STHDV YWAR
Sbjct: 479 SEFIGCSPSLSGAIRVNPWDVDAVADSLYSAITMSDFEKQLRHKKHFHYISTHDVGYWAR 538
Query: 539 SFFQDMERTCKDHFKRRCWGIGLSFGFRVVALDPNFRKLSIDAIVSAYLRSKSRAILFDY 598
SF QD+ER +DH+ +RCWG+G GFR+VAL PNFR+LSI+ VSAY RS RAI DY
Sbjct: 539 SFSQDLERASRDHYSKRCWGVGWGLGFRLVALSPNFRRLSIEQTVSAYRRSSKRAIFLDY 598
Query: 599 DGTVMPQTSINKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSPCKKLGIAAEH 658
DGT++P+TSI K PS VIS + LC+D NT+F+VSGRG+ L +W +PC+ LGIAAEH
Sbjct: 599 DGTLVPETSIVKDPSAEVISALKALCSDPNNTIFIVSGRGKVSLSEWLAPCENLGIAAEH 658
Query: 659 GYFMRWSADEEWQNCGQSVDFGWIQIAEPVMKLYTESTDGSYIEIKESALVWHHRDADPG 718
GYF RW+ +W+ G S D W ++ EP+M+LYTE+TDGS IE KESALVWHH+DADP
Sbjct: 659 GYFTRWNKSSDWETSGLSDDLEWKKVVEPIMRLYTETTDGSNIEAKESALVWHHQDADPD 718
Query: 719 FGSSQAKELLDHLESVLANEPAAVKSGQFIVEVKPQGVSKGVVAEKIFTTMAESGRHADF 778
FGS QAKELLDHLE+VL NEP V G IVEVKPQGVSKG+V KI + M E G DF
Sbjct: 719 FGSCQAKELLDHLETVLVNEPVIVNRGHQIVEVKPQGVSKGLVTGKILSRMLEDGIAPDF 778
Query: 779 VLCIGDDRSDEDMFEIIGNATSSGVLSSNASVFACTVGQKPSKAKYYLDDAAEVVTMLEA 838
V+CIGDDRSDE+MFE I S+ S + +FACTVG+KPSKAKY+LD+ ++VV +L+
Sbjct: 779 VVCIGDDRSDEEMFENISTTLSAQSSSMSTEIFACTVGRKPSKAKYFLDEVSDVVKLLQG 838
Query: 839 LAEASAP 845
LA S+P
Sbjct: 839 LANTSSP 845
|
|
| TAIR|locus:2054027 TPS11 "trehalose phosphatase/synthase 11" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 2581 (913.6 bits), Expect = 2.3e-268, P = 2.3e-268
Identities = 487/849 (57%), Positives = 617/849 (72%)
Query: 1 MMSKSYTNLLDLASGN-FPAMGPSREKKRLPRVMTVPGVISELDDDQANSVSSDVPSSVA 59
M +S+ + L L S + + MG + R+P +T +S L+ D N + V
Sbjct: 1 MSPESWKDQLSLVSADDYRIMG----RNRIPNAVTK---LSGLETDDPNG-----GAWVT 48
Query: 60 QDRVIIVANQLPVKAKRRPDNKGWSFSWDEDSLLLQLKDGLPEDMEVIYVGSLKVDVDLS 119
+ + I+V+NQLP++A R + W F +D DSL LQLKDG P + EV+YVGSL DV S
Sbjct: 49 KPKRIVVSNQLPLRAHRDISSNKWCFEFDNDSLYLQLKDGFPPETEVVYVGSLNADVLPS 108
Query: 120 EQDDVSQLLLDRFKCVPAFLPPDILTKFYHGFCKQHLWPLFHYMLPFSATHGGRFDRSLW 179
EQ+DVSQ LL++F+CVP FLP D+L K+YHGFCK +LWP+FHY+LP + G FDRS W
Sbjct: 109 EQEDVSQFLLEKFQCVPTFLPSDLLNKYYHGFCKHYLWPIFHYLLPMTQAQGSLFDRSNW 168
Query: 180 EAYVSANKIFSQRVIEVINPEDDYVWIHDYHLMVLPXXXXXXXXXXXMGFFLHSPFPSSE 239
AY + NKIF+ ++ EV+NP+DDYVWIHDYHLM+LP +G FLHSPFPSSE
Sbjct: 169 RAYTTVNKIFADKIFEVLNPDDDYVWIHDYHLMILPTFLRNRFHRIKLGIFLHSPFPSSE 228
Query: 240 IYRTLPVREEILKALLNADLIGFHTFDYARHFLSCCSRMLGLEYQSKRGYIGLEYYGRTV 299
IYRTLPVR+EILK LN DL+GFHTFDYARHFLSCCSRMLGL+Y+SKRGYIGLEY+GRTV
Sbjct: 229 IYRTLPVRDEILKGFLNCDLVGFHTFDYARHFLSCCSRMLGLDYESKRGYIGLEYFGRTV 288
Query: 300 GIKIMPVGIHMGQIESVLRLADKDWRVQELKQQFEGKTVLLGVDDMDIFKGVDLKLLAME 359
IKI+PVGIHMGQIES+ +V+ L+++F+G V+LGVDD+D+FKG+ LK AM
Sbjct: 289 SIKILPVGIHMGQIESIKASEKTAEKVKRLRERFKGNIVMLGVDDLDMFKGISLKFWAMG 348
Query: 360 HLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPG-YEPVVFID 418
LL+Q+ + +G+ VLVQI NPAR GKD+++++ +I+ IN FGRPG Y+P+VFI+
Sbjct: 349 QLLEQNEELRGKVVLVQITNPARSSGKDVQDVEKQINLIADEINSKFGRPGGYKPIVFIN 408
Query: 419 KPVTLSERAAYYTIAECVVVTAVRDGMNLTPYEYIVCRQGVXXXXXXXXXXAP--KKSML 476
PV+ ++ AYY I+ECVVV AVRDGMNL PY+Y V RQG +KS++
Sbjct: 409 GPVSTLDKVAYYAISECVVVNAVRDGMNLVPYKYTVTRQGSPALDAALGFGEDDVRKSVI 468
Query: 477 VVSEFIGCSPSLSGAIRVNPWNIEATAEAMHEAIQMNEAEKQLRHEKHYRYVSTHDVAYW 536
+VSEFIGCSPSLSGAIRVNPWNI+A AM A+ M++ EK LRH+KH++Y+S+H+VAYW
Sbjct: 469 IVSEFIGCSPSLSGAIRVNPWNIDAVTNAMSSAMTMSDKEKNLRHQKHHKYISSHNVAYW 528
Query: 537 ARSFFQDMERTCKDHFKRRCWGIGLSFGFRVVALDPNFRKLSIDAIVSAYLRSKSRAILF 596
ARS+ QD++R CKDH+ +R WG+G F+VVALDPNFR+L + IV AY RS SR IL
Sbjct: 529 ARSYDQDLQRACKDHYNKRFWGVGFGLFFKVVALDPNFRRLCGETIVPAYRRSSSRLILL 588
Query: 597 DYDGTVMPQTSINKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSPCKKLGIAA 656
DYDGT+M Q +++K PS +IS++N LC+D N VF+VSGRG+D L KWF C LGI+A
Sbjct: 589 DYDGTMMDQDTLDKRPSDDLISLLNRLCDDPSNLVFIVSGRGKDPLSKWFDSCPNLGISA 648
Query: 657 EHGYFMRWSADEEWQNCGQSVDFGWIQIAEPVMKLYTESTDGSYIEIKESALVWHHRDAD 716
EHGYF RW+++ W+ D W +IA+PVM Y E+TDGS+IE KESA+VWHH++AD
Sbjct: 649 EHGYFTRWNSNSPWETSELPADLSWKKIAKPVMNHYMEATDGSFIEEKESAMVWHHQEAD 708
Query: 717 PGFGSSQAKELLDHLESVLANEPAAVKSGQFIVEVKPQGVSKGVVAEKIFTTMAES-GRH 775
FGS QAKELLDHLESVL NEP VK GQ IVEVKPQGVSKG V E + TM + G+
Sbjct: 709 HSFGSWQAKELLDHLESVLTNEPVVVKRGQHIVEVKPQGVSKGKVVEHLIATMRNTKGKR 768
Query: 776 ADFVLCIGDDRSDEDMFE-IIGNATSSGVLSSNASVFACTVGQKPSKAKYYLDDAAEVVT 834
DF+LCIGDDRSDEDMF+ I+ + S + VFACTVGQKPSKAKYYLDD V+
Sbjct: 769 PDFLLCIGDDRSDEDMFDSIVKHQDVSSI--GLEEVFACTVGQKPSKAKYYLDDTPSVIK 826
Query: 835 MLEALAEAS 843
MLE LA AS
Sbjct: 827 MLEWLASAS 835
|
|
| DICTYBASE|DDB_G0287657 tpsA "alpha,alpha-trehalose-phosphate synthase" [Dictyostelium discoideum (taxid:44689)] | Back alignment and assigned GO terms |
|---|
Score = 930 (332.4 bits), Expect = 2.4e-140, Sum P(2) = 2.4e-140
Identities = 183/485 (37%), Positives = 289/485 (59%)
Query: 62 RVIIVANQLPVKAKRRPDNKGWSFSWDEDSLLLQLKDGLPEDMEVIYVGSLKVDVDLSEQ 121
R+I+V+N+LPV K+ + K WS L+ L GL + I+VG + +++ ++
Sbjct: 17 RLIVVSNRLPVSIKKESNGK-WSCKMSSGGLVAALS-GLKSNF--IWVGWIGAEIEEDDR 72
Query: 122 DDVSQLLLDRFKCVPAFLPPDILTKFYHGFCKQHLWPLFHYMLPFSATHGGRFDRSLWEA 181
++ +LL + C+P FL + + Y+GF LWPLFHY LP +D +W +
Sbjct: 73 KEIKELLWKDYSCIPVFLSEKVANEHYNGFSNGVLWPLFHY-LPGDLD----YDDRIWNS 127
Query: 182 YVSANKIFSQRVIEVINPEDDYVWIHDYHLMVLPXXXXXXXXXXXMGFFLHSPFPSSEIY 241
YV AN+ FS V E++ P +D VW+HDYH+M+LP +GFFLH PFPSSEI+
Sbjct: 128 YVEANEQFSSVVAEILKP-NDLVWVHDYHMMLLPEILKQKKPDARIGFFLHIPFPSSEIF 186
Query: 242 RTLPVREEILKALLNADLIGFHTFDYARHFLSCCSRMLGLEYQSKRGYIGLEYYGRTVGI 301
R LP R+EIL +LN LIGFHT+DYARHFL C+R++GLE G+ + R V +
Sbjct: 187 RVLPCRKEILLGILNCCLIGFHTYDYARHFLKSCTRIVGLETAPN----GVYFKDRFVQV 242
Query: 302 KIMPVGIHMGQIESVLRLADKDWRVQELKQQFEGKTVLLGVDDMDIFKGVDLKLLAMEHL 361
+ PVGI + L+ R++ELK+ FEG VL+G+D +D KG+ KL A+E L
Sbjct: 243 GVFPVGIDPDKFFESLKTTQVQNRIKELKESFEGTKVLIGIDRLDYIKGIPQKLQAIERL 302
Query: 362 LKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDKPV 421
+++P+W+G+ VL+Q+A P+R ++ ++++ E+ RIN +G GY P+ ++ + V
Sbjct: 303 FQKYPEWKGKLVLIQVAVPSRQDVEEYQKLKKEVEELVGRINGLYGSIGYSPIHYLFQSV 362
Query: 422 TLSERAAYYTIAECVVVTAVRDGMNLTPYEYIVCRQGVXXXXXXXXXXAPKKSMLVVSEF 481
SE A Y I++ ++T++RDGMNL EYIVC+ +L++SEF
Sbjct: 363 DPSELTALYNISDAALITSIRDGMNLVAQEYIVCQ-------------TENNGVLILSEF 409
Query: 482 IGCSPSLSGAIRVNPWNIEATAEAMHEAIQMNEAEKQLRHEKHYRYVSTHDVAYWARSFF 541
G + SLSGA+ +NPWN E A+++H ++ M E++ +H+ +YV+ H ++W F
Sbjct: 410 TGAAQSLSGAVMINPWNTEEVADSIHNSLLMPPEEREEKHQMLLKYVTKHTASHWGLGFV 469
Query: 542 QDMER 546
+++ +
Sbjct: 470 KELNK 474
|
|
| TAIR|locus:2202990 TPS1 "trehalose-6-phosphate synthase" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 873 (312.4 bits), Expect = 3.5e-131, Sum P(3) = 3.5e-131
Identities = 187/492 (38%), Positives = 290/492 (58%)
Query: 60 QDRVIIVANQLPVKAKRRPDNKGWSFSWDEDSLLLQLKDGLPEDMEVIYVGSLKVDV-DL 118
+ R+++VAN+LPV A RR ++ WS L+ L G+ E E ++G V+V D
Sbjct: 91 RQRLLVVANRLPVSAVRRGEDS-WSLEISAGGLVSALL-GVKE-FEARWIGWAGVNVPDE 147
Query: 119 SEQDDVSQLLLDRFKCVPAFLPPDILTKFYHGFCKQHLWPLFHYM-LPFSATHGG-RFDR 176
Q +S+ L ++ +C+P FL +I+ ++Y+G+C LWPLFHY+ LP R +
Sbjct: 148 VGQKALSKALAEK-RCIPVFLDEEIVHQYYNGYCNNILWPLFHYLGLPQEDRLATTRSFQ 206
Query: 177 SLWEAYVSANKIFSQRVIEVINPEDDYVWIHDYHLMVLPXXXXXXXXXXXMGFFLHSPFP 236
S + AY AN++F+ V E E D VW HDYHLM LP +G+FLH+PFP
Sbjct: 207 SQFAAYKKANQMFADVVNEHYE-EGDVVWCHDYHLMFLPKCLKEYNSKMKVGWFLHTPFP 265
Query: 237 SSEIYRTLPVREEILKALLNADLIGFHTFDYARHFLSCCSRMLGLEYQSKRGYIGLEYYG 296
SSEI+RTLP R E+L+++L ADL+GFHT+DYARHF+S C+R+LGLE + G+E G
Sbjct: 266 SSEIHRTLPSRSELLRSVLAADLVGFHTYDYARHFVSACTRILGLEGTPE----GVEDQG 321
Query: 297 RTVGIKIMPVGIHMGQIESVLRLADKDWRVQELKQQFEGKTVLLGVDDMDIFKGVDLKLL 356
R + P+GI + L + + ++ELK++F G+ V+LGVD +D+ KG+ K+L
Sbjct: 322 RLTRVAAFPIGIDSDRFIRALEVPEVIQHMKELKERFAGRKVMLGVDRLDMIKGIPQKIL 381
Query: 357 AMEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVF 416
A E L+++ W+ + VL+QIA P R + +++ +++H RIN FG P+
Sbjct: 382 AFEKFLEENANWRDKVVLLQIAVPTRTDVPEYQKLTSQVHEIVGRINGRFGTLTAVPIHH 441
Query: 417 IDKPVTLSERAAYYTIAECVVVTAVRDGMNLTPYEYIVCRQGVXXXXXXXXXXAPKKSML 476
+D+ + A Y + + +VT++RDGMNL YE++ C++ KK +L
Sbjct: 442 LDRSLDFHALCALYAVTDVALVTSLRDGMNLVSYEFVACQEA-------------KKGVL 488
Query: 477 VVSEFIGCSPSL-SGAIRVNPWNIEATAEAMHEAIQMNEAEKQLRHEKHYRYVSTHDVAY 535
++SEF G + SL +GAI VNPWNI A ++ +A+ M E++ RH ++ +V TH
Sbjct: 489 ILSEFAGAAQSLGAGAILVNPWNITEVAASIGQALNMTAEEREKRHRHNFHHVKTHTAQE 548
Query: 536 WARSFFQDMERT 547
WA +F ++ T
Sbjct: 549 WAETFVSELNDT 560
|
|
| ASPGD|ASPL0000037859 orlA [Emericella nidulans (taxid:162425)] | Back alignment and assigned GO terms |
|---|
Score = 681 (244.8 bits), Expect = 9.4e-122, Sum P(2) = 9.4e-122
Identities = 144/392 (36%), Positives = 227/392 (57%)
Query: 151 FCKQHLWPLFHYMLPFSATHGGRFDRSLWEAYVSANKIFSQRVIEVINPEDDYVWIHDYH 210
+ ++ L+ L HY + GRF+R W YV N++F++R+++ E D VWIHDYH
Sbjct: 247 YAEKELYALLHYKQ--NGPTDGRFERDSWTDYVRMNQLFAERILQEYK-EGDIVWIHDYH 303
Query: 211 LMVLPXXXXXXXXXXXMGFFLHSPFPSSEIYRTLPVREEILKALLNADLIGFHTFDYARH 270
L +LP +GF+LHSPFPSSE R L R+EIL +L A++IGF TF Y+RH
Sbjct: 304 LFLLPSILRQHVPNIYIGFYLHSPFPSSEYMRCLAKRKEILTGVLGANMIGFQTFSYSRH 363
Query: 271 FLSCCSRMLGLEYQSKRGYIGLEYYGRTVGIKIMPVGIHMGQIESV-LRLADKDWRVQEL 329
F SCC+R+LG E S G++ YG V + + P+GI I+ + AD + V+ L
Sbjct: 364 FSSCCTRVLGFESDSA----GVDAYGAHVAVDVFPIGIDAEAIQKIAFENADTEKAVEGL 419
Query: 330 KQQFEGKTVLLGVDDMDIFKGVDLKLLAMEHLLKQHPKWQGRAVLVQIANPAR-GRGKDL 388
+Q + GK +++G D +D +GV KL A E L++ P+W+ + VL+Q+ +P K+
Sbjct: 420 RQLYAGKKIIVGRDRLDSARGVAQKLQAFETFLERFPEWRDKVVLIQVTSPTSVEEEKEE 479
Query: 389 EEIQAEIHATCKRINETFGRPGYEPVVFIDKPVTLSERAAYYTIAECVVVTAVRDGMNLT 448
++I + I IN FG + PV + + ++ E A +A+ ++T VRDGMN T
Sbjct: 480 QKIASRISNLVSTINGRFGSLSFSPVKYYPQYLSPHEYFALLRVADVGLITTVRDGMNTT 539
Query: 449 PYEYIVCRQGVXXXXXXXXXXAPKKSMLVVSEFIGCSPSLSGAIRVNPWNIEATAEAMHE 508
EYI+C+Q S L++SEF G + +LS AI +NPW+ +EA+++
Sbjct: 540 SLEYILCQQ-------------ENHSPLILSEFSGTAGALSSAIHINPWDTIGVSEAINK 586
Query: 509 AIQMNEAEKQLRHEKHYRYVSTHDVAYWARSF 540
A+ + A+K+ +H K Y++V+T+ V+ W+ F
Sbjct: 587 ALTESVADKKEQHLKLYKHVTTNTVSAWSNQF 618
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
| ID | Name | Annotated EC number | Identity | Query coverage | Hit coverage | RBH(Q2H) | RBH(H2Q) |
| Q9LMI0 | TPS7_ARATH | 2, ., 4, ., 1, ., 1, 5 | 0.7611 | 0.9906 | 0.9964 | yes | no |
| Q54K57 | TPSA_DICDI | 2, ., 4, ., 1, ., 1, 5 | 0.3531 | 0.8282 | 0.9672 | yes | no |
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
| Prediction Level | EC number | Confidence of Prediction |
| 3rd Layer | 2.4.1 | 0.976 |
| 4th Layer | 2.4.1.15 | 0.991 |
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 856 | |||
| PLN02205 | 854 | PLN02205, PLN02205, alpha,alpha-trehalose-phosphat | 0.0 | |
| pfam00982 | 470 | pfam00982, Glyco_transf_20, Glycosyltransferase fa | 0.0 | |
| cd03788 | 460 | cd03788, GT1_TPS, Trehalose-6-Phosphate Synthase ( | 0.0 | |
| PRK14501 | 726 | PRK14501, PRK14501, putative bifunctional trehalos | 0.0 | |
| PLN03063 | 797 | PLN03063, PLN03063, alpha,alpha-trehalose-phosphat | 1e-175 | |
| PLN03064 | 934 | PLN03064, PLN03064, alpha,alpha-trehalose-phosphat | 1e-165 | |
| TIGR02400 | 456 | TIGR02400, trehalose_OtsA, alpha,alpha-trehalose-p | 1e-144 | |
| COG0380 | 486 | COG0380, OtsA, Trehalose-6-phosphate synthase [Car | 1e-141 | |
| pfam02358 | 235 | pfam02358, Trehalose_PPase, Trehalose-phosphatase | 1e-83 | |
| TIGR02398 | 487 | TIGR02398, gluc_glyc_Psyn, glucosylglycerol-phosph | 1e-65 | |
| PRK10117 | 474 | PRK10117, PRK10117, trehalose-6-phosphate synthase | 1e-59 | |
| COG1877 | 266 | COG1877, OtsB, Trehalose-6-phosphatase [Carbohydra | 3e-45 | |
| TIGR00685 | 244 | TIGR00685, T6PP, trehalose-phosphatase | 5e-26 | |
| TIGR01484 | 204 | TIGR01484, HAD-SF-IIB, HAD-superfamily hydrolase, | 3e-15 | |
| PRK10187 | 266 | PRK10187, PRK10187, trehalose-6-phosphate phosphat | 1e-08 | |
| PLN02151 | 354 | PLN02151, PLN02151, trehalose-phosphatase | 2e-08 | |
| PLN03017 | 366 | PLN03017, PLN03017, trehalose-phosphatase | 4e-08 | |
| PLN02580 | 384 | PLN02580, PLN02580, trehalose-phosphatase | 6e-08 | |
| PLN03064 | 934 | PLN03064, PLN03064, alpha,alpha-trehalose-phosphat | 2e-05 | |
| COG0561 | 264 | COG0561, Cof, Predicted hydrolases of the HAD supe | 3e-05 | |
| pfam08282 | 254 | pfam08282, Hydrolase_3, haloacid dehalogenase-like | 7e-05 | |
| cd03801 | 374 | cd03801, GT1_YqgM_like, This family is most closel | 2e-04 | |
| pfam00534 | 158 | pfam00534, Glycos_transf_1, Glycosyl transferases | 0.001 |
| >gnl|CDD|177855 PLN02205, PLN02205, alpha,alpha-trehalose-phosphate synthase [UDP-forming] | Back alignment and domain information |
|---|
Score = 1334 bits (3453), Expect = 0.0
Identities = 591/853 (69%), Positives = 704/853 (82%), Gaps = 9/853 (1%)
Query: 1 MMSKSYTNLLDLASGNFPAMGPSREKKRLPRVMTVPGVISELDDDQANSVSSDVPSSVAQ 60
M+S+SY+NLL+LASG P+ G R +R+PR+MTV G++S++DDD + SV SD SS
Sbjct: 1 MVSRSYSNLLELASGESPSFG--RMNRRIPRIMTVAGIMSDIDDDPSESVCSDPSSSSVP 58
Query: 61 -DRVIIVANQLPVKAKRRPD-NKGWSFSWDEDSLLLQLKDGLPED-MEVIYVGSLKVDVD 117
DR+IIVANQLP++A+R+ D +KGW FSWDE+SLLLQLKDGL +D +EVIYVG LK ++
Sbjct: 59 KDRIIIVANQLPIRAQRKSDGSKGWIFSWDENSLLLQLKDGLGDDEIEVIYVGCLKEEIH 118
Query: 118 LSEQDDVSQLLLDRFKCVPAFLPPDILTKFYHGFCKQHLWPLFHYMLPFSATHGGRFDRS 177
L+EQ++VSQ+LL+ FKCVP FLPPD+ T++YHGFCKQ LWPLFHYMLP S GGRF+RS
Sbjct: 119 LNEQEEVSQILLETFKCVPTFLPPDLFTRYYHGFCKQQLWPLFHYMLPLSPDLGGRFNRS 178
Query: 178 LWEAYVSANKIFSQRVIEVINPEDDYVWIHDYHLMVLPTFLRRRFTRLRMGFFLHSPFPS 237
LW+AYVS NKIF+ R++EVINPEDD+VWIHDYHLMVLPTFLR+RF R+++GFFLHSPFPS
Sbjct: 179 LWQAYVSVNKIFADRIMEVINPEDDFVWIHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPS 238
Query: 238 SEIYRTLPVREEILKALLNADLIGFHTFDYARHFLSCCSRMLGLEYQSKRGYIGLEYYGR 297
SEIY+TLP+REE+L+ALLN+DLIGFHTFDYARHFLSCCSRMLGL Y+SKRGYIGLEYYGR
Sbjct: 239 SEIYKTLPIREELLRALLNSDLIGFHTFDYARHFLSCCSRMLGLSYESKRGYIGLEYYGR 298
Query: 298 TVGIKIMPVGIHMGQIESVLRLADKDWRVQELKQQF--EGKTVLLGVDDMDIFKGVDLKL 355
TV IKI+PVGIHMGQ++SVL L + + +V+EL +QF + + +LLGVDDMDIFKG+ LKL
Sbjct: 299 TVSIKILPVGIHMGQLQSVLSLPETEAKVKELIKQFCDQDRIMLLGVDDMDIFKGISLKL 358
Query: 356 LAMEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVV 415
LAME LL QHP+WQG+ VLVQIANPARG+GKD++E+QAE H+T KRINETFG+PGY+P+V
Sbjct: 359 LAMEQLLMQHPEWQGKVVLVQIANPARGKGKDVKEVQAETHSTVKRINETFGKPGYDPIV 418
Query: 416 FIDKPVTLSERAAYYTIAECVVVTAVRDGMNLTPYEYIVCRQGVSGSES--SSESSAPKK 473
ID P+ ER AYY +AEC +VTAVRDGMNL PYEYI+ RQG + E S PKK
Sbjct: 419 LIDAPLKFYERVAYYVVAECCLVTAVRDGMNLIPYEYIISRQGNEKLDKLLGLEPSTPKK 478
Query: 474 SMLVVSEFIGCSPSLSGAIRVNPWNIEATAEAMHEAIQMNEAEKQLRHEKHYRYVSTHDV 533
SMLVVSEFIGCSPSLSGAIRVNPWNI+A A+AM A++M E EKQLRHEKHYRYVSTHDV
Sbjct: 479 SMLVVSEFIGCSPSLSGAIRVNPWNIDAVADAMDSALEMAEPEKQLRHEKHYRYVSTHDV 538
Query: 534 AYWARSFFQDMERTCKDHFKRRCWGIGLSFGFRVVALDPNFRKLSIDAIVSAYLRSKSRA 593
YWARSF QD+ERTC+DH +RRCWGIG FRVVALDPNFRKLS++ IVSAY R+ +RA
Sbjct: 539 GYWARSFLQDLERTCRDHSRRRCWGIGFGLSFRVVALDPNFRKLSMEHIVSAYKRTTTRA 598
Query: 594 ILFDYDGTVMPQTSINKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSPCKKLG 653
IL DYDGT+MPQ SI+K+PS I I+NTLC D N VF+VS R R L WFSPC+KLG
Sbjct: 599 ILLDYDGTLMPQASIDKSPSSKSIDILNTLCRDKNNMVFIVSARSRKTLADWFSPCEKLG 658
Query: 654 IAAEHGYFMRWSADEEWQNCGQSVDFGWIQIAEPVMKLYTESTDGSYIEIKESALVWHHR 713
IAAEHGYF+R D EW+ C D W QIAEPVM+LYTE+TDGS IE KE+ALVW +
Sbjct: 659 IAAEHGYFLRLKRDVEWETCVPVADCSWKQIAEPVMQLYTETTDGSTIEDKETALVWCYE 718
Query: 714 DADPGFGSSQAKELLDHLESVLANEPAAVKSGQFIVEVKPQGVSKGVVAEKIFTTMAESG 773
DADP FGS QAKELLDHLESVLANEP VKSGQ IVEVKPQGVSKG+VA+++ + M E G
Sbjct: 719 DADPDFGSCQAKELLDHLESVLANEPVTVKSGQNIVEVKPQGVSKGLVAKRLLSIMQERG 778
Query: 774 RHADFVLCIGDDRSDEDMFEIIGNATSSGVLSSNASVFACTVGQKPSKAKYYLDDAAEVV 833
DFVLCIGDDRSDEDMFE+I ++ + ++ A VFACTVGQKPSKAKYYLDD AE+V
Sbjct: 779 MLPDFVLCIGDDRSDEDMFEVITSSMAGPSIAPRAEVFACTVGQKPSKAKYYLDDTAEIV 838
Query: 834 TMLEALAEASAPP 846
+++ LA S
Sbjct: 839 RLMQGLASVSEQI 851
|
Length = 854 |
| >gnl|CDD|216227 pfam00982, Glyco_transf_20, Glycosyltransferase family 20 | Back alignment and domain information |
|---|
Score = 670 bits (1730), Expect = 0.0
Identities = 236/489 (48%), Positives = 325/489 (66%), Gaps = 24/489 (4%)
Query: 62 RVIIVANQLPVKAKRRPDNKGWSFSWDEDSL-LLQLKDGLPEDMEVIYVGSLKVDVDLSE 120
R+++V+N+LPV AKR + K W FS S L+ +GL E E ++VG V VD E
Sbjct: 2 RLVVVSNRLPVTAKREEEGK-WEFSIKMSSGGLVSALNGLSEATEGVWVGWPGVPVDEDE 60
Query: 121 -QDDVSQLLLDRFKCVPAFLPPDILTKFYHGFCKQHLWPLFHYMLPFSATHGGRFDRSLW 179
+D VSQLL ++F CVP FL + + ++Y+GF LWPLFHY LP + + FDRS W
Sbjct: 61 PKDRVSQLLKEKFTCVPVFLDDEDVDEYYNGFSNSILWPLFHYRLPPN--NEDEFDRSWW 118
Query: 180 EAYVSANKIFSQRVIEVINPEDDYVWIHDYHLMVLPTFLRRRFTRLRMGFFLHSPFPSSE 239
+AYV NK+F+ +++EV D +W+HDYHLM+LP LR+R ++GFFLH PFPSSE
Sbjct: 119 DAYVKVNKLFADKIVEVYKD-GDLIWVHDYHLMLLPQMLRKRLPDAKIGFFLHIPFPSSE 177
Query: 240 IYRTLPVREEILKALLNADLIGFHTFDYARHFLSCCSRMLGLEYQSKRGYIGLEYYGRTV 299
I+R LPVREEIL+ LL ADLIGFHT+DYARHFLSCCSR+LGLE S G+EY GRTV
Sbjct: 178 IFRCLPVREEILRGLLGADLIGFHTYDYARHFLSCCSRLLGLETTSDG---GVEYGGRTV 234
Query: 300 GIKIMPVGIHMGQIESVLRLADKDWRVQELKQQFEGKT-VLLGVDDMDIFKGVDLKLLAM 358
+ P+GI G+IES L+ +V+ELK++F K ++LGVD +D KG+ KLLA
Sbjct: 235 SVGAFPIGIDPGRIESGLKSPSVQEKVKELKERFGNKKKLILGVDRLDYIKGIPQKLLAF 294
Query: 359 EHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFID 418
E L+++P+W+G+ VLVQIA P+RG ++ + +++++ RIN FG Y PV +
Sbjct: 295 ERFLEEYPEWRGKVVLVQIAVPSRGDVEEYQNLRSQVEELVGRINGEFGTLDYTPVHHLH 354
Query: 419 KPVTLSERAAYYTIAECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVV 478
+ + E A Y IA+ +VT++RDGMNL YEY+ C+Q +K +L++
Sbjct: 355 RSLDFDELIALYAIADVCLVTSLRDGMNLVAYEYVACQQD-------------RKGVLIL 401
Query: 479 SEFIGCSPSL-SGAIRVNPWNIEATAEAMHEAIQMNEAEKQLRHEKHYRYVSTHDVAYWA 537
SEF G + SL GAI VNPW+IE AEA++EA+ M+E E+Q RH K ++Y+S HDV YWA
Sbjct: 402 SEFAGAAQSLNDGAILVNPWDIEEVAEAINEALTMSEEERQKRHRKLFKYISKHDVQYWA 461
Query: 538 RSFFQDMER 546
SF D++R
Sbjct: 462 ESFLSDLKR 470
|
Members of this family belong to glycosyl transferase family 20. OtsA (Trehalose-6-phosphate synthase) is homologous to regions in the subunits of yeast trehalose-6-phosphate synthase/phosphate complex. Length = 470 |
| >gnl|CDD|99963 cd03788, GT1_TPS, Trehalose-6-Phosphate Synthase (TPS) is a glycosyltransferase that catalyses the synthesis of alpha,alpha-1,1-trehalose-6-phosphate from glucose-6-phosphate using a UDP-glucose donor | Back alignment and domain information |
|---|
Score = 601 bits (1551), Expect = 0.0
Identities = 200/484 (41%), Positives = 283/484 (58%), Gaps = 24/484 (4%)
Query: 62 RVIIVANQLPVKAKRRPDNKGWSFSWDEDSLLLQLKDGLPEDMEVIYVGSLKVDVDLSEQ 121
R+++V+N+LPV +R D G + L GL + ++VG ++ D E+
Sbjct: 1 RLVVVSNRLPVSIERDGD--GEFEARRSAGGLATALKGLLKRTGGLWVGWSGIEEDEEEE 58
Query: 122 DDVSQLLLDRFKCVPAFLPPDILTKFYHGFCKQHLWPLFHYMLPFSATHGGRFDRSLWEA 181
D+VS LL + P FL P+ +Y+GF + LWPLFHY L RFDR WEA
Sbjct: 59 DEVSTELLGEYTVAPVFLSPEEFEGYYNGFSNEVLWPLFHYRLDL-----ARFDREDWEA 113
Query: 182 YVSANKIFSQRVIEVINPEDDYVWIHDYHLMVLPTFLRRRFTRLRMGFFLHSPFPSSEIY 241
YV N+ F+ + EV+ P D VW+HDYHL++LP LR R R+GFFLH PFPSSEI+
Sbjct: 114 YVRVNRKFADAIAEVLRP-GDLVWVHDYHLLLLPQMLRERGPDARIGFFLHIPFPSSEIF 172
Query: 242 RTLPVREEILKALLNADLIGFHTFDYARHFLSCCSRMLGLEYQSKRGYIGLEYYGRTVGI 301
R LP REE+L+ LL ADLIGF T YAR+FLSCCSR+LGLE G+EY GR V +
Sbjct: 173 RCLPWREELLRGLLGADLIGFQTERYARNFLSCCSRLLGLEVTD---DGGVEYGGRRVRV 229
Query: 302 KIMPVGIHMGQIESVLRLADKDWRVQELKQQFEGKTVLLGVDDMDIFKGVDLKLLAMEHL 361
P+GI + + R EL+++ G+ +++GVD +D KG+ +LLA E L
Sbjct: 230 GAFPIGIDPDAFRKLAASPEVQERAAELRERLGGRKLIVGVDRLDYSKGIPERLLAFERL 289
Query: 362 LKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDKPV 421
L+++P+W+G+ VLVQIA P+R + +E++ E+ RIN FG + PV ++ + +
Sbjct: 290 LERYPEWRGKVVLVQIAVPSRTDVPEYQELRREVEELVGRINGKFGTLDWTPVRYLYRSL 349
Query: 422 TLSERAAYYTIAECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEF 481
E AA Y A+ +VT +RDGMNL EY+ C+ +L++SEF
Sbjct: 350 PREELAALYRAADVALVTPLRDGMNLVAKEYVACQD-------------DDPGVLILSEF 396
Query: 482 IGCSPSLSGAIRVNPWNIEATAEAMHEAIQMNEAEKQLRHEKHYRYVSTHDVAYWARSFF 541
G + LSGA+ VNP++I+ A+A+H A+ M E++ RH K YV THDV WA SF
Sbjct: 397 AGAAEELSGALLVNPYDIDEVADAIHRALTMPLEERRERHRKLREYVRTHDVQAWANSFL 456
Query: 542 QDME 545
D+
Sbjct: 457 DDLA 460
|
It is a key enzyme in the trehalose synthesis pathway. Trehalose is a nonreducing disaccharide present in a wide variety of organisms and may serve as a source of energy and carbon. It is characterized most notably in insect, plant, and microbial cells. Its production is often associated with a variety of stress conditions, including desiccation, dehydration, heat, cold, and oxidation. This family represents the catalytic domain of the TPS. Some members of this domain family coexist with a C-terminal trehalose phosphatase domain. Length = 460 |
| >gnl|CDD|184712 PRK14501, PRK14501, putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional | Back alignment and domain information |
|---|
Score = 610 bits (1574), Expect = 0.0
Identities = 265/785 (33%), Positives = 403/785 (51%), Gaps = 64/785 (8%)
Query: 62 RVIIVANQLPVKAKRRPDNKGWSFSWDEDSLLLQLKDGLPEDMEVIYVG--SLKVDVDLS 119
R+IIV+N+LPV R G + L L+ E ++VG L ++ +
Sbjct: 2 RLIIVSNRLPVTVVREDG--GVELTPSVGGLATGLR-SFHERGGGLWVGWPGLDLEEESE 58
Query: 120 EQDDVSQLLLDRFKCVPAFLPPDILTKFYHGFCKQHLWPLFHYMLPFSATHGGRFDRSLW 179
EQ + L+ VP FL + + ++Y GFC LWPLFHY ++ F+ W
Sbjct: 59 EQRARIEPRLEELGLVPVFLSAEEVDRYYEGFCNSTLWPLFHYFPEYTE-----FEDRFW 113
Query: 180 EAYVSANKIFSQRVIEVINPEDDYVWIHDYHLMVLPTFLRRRFTRLRMGFFLHSPFPSSE 239
E+Y N+ F++ + + P D VW+HDY LM+LP LR R R+GFFLH PFPS E
Sbjct: 114 ESYERVNQRFAEAIAAIARP-GDVVWVHDYQLMLLPAMLRERLPDARIGFFLHIPFPSFE 172
Query: 240 IYRTLPVREEILKALLNADLIGFHTFDYARHFLSCCSRMLGLEYQSKRGYIGLEYYGRTV 299
++R LP REEIL+ LL ADLIGFHT+DY RHFLS R+LG E + +G GR V
Sbjct: 173 VFRLLPWREEILEGLLGADLIGFHTYDYVRHFLSSVLRVLGYETELGEIRLG----GRIV 228
Query: 300 GIKIMPVGIHMGQIESVLRLADKDWRVQELKQQFEGKTVLLGVDDMDIFKGVDLKLLAME 359
+ P+GI + + + + ++ L+Q G+ ++L +D +D KG+ +LLA E
Sbjct: 229 RVDAFPMGIDYDKFHNSAQDPEVQEEIRRLRQDLRGRKIILSIDRLDYTKGIPRRLLAFE 288
Query: 360 HLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDK 419
L+++P+W+G+ LVQ+A P+R +E++ EI RIN FG + P+ + +
Sbjct: 289 RFLEKNPEWRGKVRLVQVAVPSRTGVPQYQEMKREIDELVGRINGEFGTVDWTPIHYFYR 348
Query: 420 PVTLSERAAYYTIAECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVS 479
+ E A Y A+ +VT +RDGMNL EY+ R +L++S
Sbjct: 349 SLPFEELVALYRAADVALVTPLRDGMNLVAKEYVASRTD-------------GDGVLILS 395
Query: 480 EFIGCSPSLSGAIRVNPWNIEATAEAMHEAIQMNEAEKQLRHEKHYRYVSTHDVAYWARS 539
E G + L+ A+ VNP +IE A A+ A++M E E++ R + + +DV WA
Sbjct: 396 EMAGAAAELAEALLVNPNDIEGIAAAIKRALEMPEEEQRERMQAMQERLRRYDVHKWASD 455
Query: 540 FFQDMERTCKDHFKRRCWGIGLSFGFRVVALDPNFRKLSIDAIVSAYLRSKSRAILFDYD 599
F ++ + + F + P + + I++ Y + R +L DYD
Sbjct: 456 FLDELREAAEKNKA-----------FASKPITPA----AAEEIIARYRAASRRLLLLDYD 500
Query: 600 GTVMPQTSI--NKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSPCKKLGIAAE 657
GT++P P + + ++ L D V ++SGR RD L +WF + + AE
Sbjct: 501 GTLVPFAPDPELAVPDKELRDLLRRLAADPNTDVAIISGRDRDTLERWFGD-LPIHLVAE 559
Query: 658 HGYFMRWSADEEWQNCGQSVDFGWIQIAEPVMKLYTESTDGSYIEIKESALVWHHRDADP 717
HG + R + EWQ + V W P+++ + + T GS+IE KE++L WH+R+ADP
Sbjct: 560 HGAWSR-APGGEWQLL-EPVATEWKDAVRPILEEFVDRTPGSFIEEKEASLAWHYRNADP 617
Query: 718 GFGSSQAKELLDHLESVLANEPAAVKSGQFIVEVKPQGVSKGVVAEKIFTTMAESGRHAD 777
G ++A EL+ L S+L+N P V G +VEV+P GV+KG ++ E+G + D
Sbjct: 618 ELGEARANELILALSSLLSNAPLEVLRGNKVVEVRPAGVNKGRAVRRLL----EAGPY-D 672
Query: 778 FVLCIGDDRSDEDMFEIIGNATSSGVLSSNASVFACTVGQKPSKAKYYLDDAAEVVTMLE 837
FVL IGDD +DEDMF L A VG S+A+Y L EV +L
Sbjct: 673 FVLAIGDDTTDEDMFR---------ALPETA--ITVKVGPGESRARYRLPSQREVRELLR 721
Query: 838 ALAEA 842
L +
Sbjct: 722 RLLDI 726
|
Length = 726 |
| >gnl|CDD|215555 PLN03063, PLN03063, alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional | Back alignment and domain information |
|---|
Score = 524 bits (1352), Expect = e-175
Identities = 281/821 (34%), Positives = 447/821 (54%), Gaps = 78/821 (9%)
Query: 59 AQDRVIIVANQLPVKAKRRPDNKGWSFSWDED---SLLLQLKDGLPEDMEVIYVGSLKVD 115
+ R+++VAN+LPV AKR ++ WS S LL +K+ E ++G VD
Sbjct: 9 ERPRLLVVANRLPVSAKRTGEDS-WSLEMSPGGLVSALLGVKE-----FETKWIGWPGVD 62
Query: 116 V-DLSEQDDVSQLLLDRFKCVPAFLPPDILTKFYHGFCKQHLWPLFHYM-LPFSATHGG- 172
V D + +++ L ++ C+P FL ++ ++Y+G+C LWP+FHYM LP H
Sbjct: 63 VHDEIGKAALTESLAEK-GCIPVFLN-EVFDQYYNGYCNNILWPIFHYMGLPQEDRHDAT 120
Query: 173 RFDRSLWEAYVSANKIFSQRVIEVINPEDDYVWIHDYHLMVLPTFLRRRFTRLRMGFFLH 232
R S ++AY AN++F V E E D VW HDYHLM LP +L+ ++++G+FLH
Sbjct: 121 RTFESQYDAYKKANRMFLDVVKENYE-EGDVVWCHDYHLMFLPQYLKEYNNKMKVGWFLH 179
Query: 233 SPFPSSEIYRTLPVREEILKALLNADLIGFHTFDYARHFLSCCSRMLGLEYQSKRGYIGL 292
+PFPSSEIY+TLP R E+L+A+L ADLIGFHT+D+ARHFLS C+R+LG+E + G+
Sbjct: 180 TPFPSSEIYKTLPSRSELLRAVLTADLIGFHTYDFARHFLSACTRILGVEGTHE----GV 235
Query: 293 EYYGRTVGIKIMPVGIHMGQIESVLRLADKDWRVQELKQQFEGKTVLLGVDDMDIFKGVD 352
G+ + + P+GI + + L + ++ELK+ F G+ V+LGVD +D+ KG+
Sbjct: 236 VDQGKVTRVAVFPIGIDPERFINTCELPEVKQHMKELKRFFAGRKVILGVDRLDMIKGIP 295
Query: 353 LKLLAMEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYE 412
K LA E L+++P+W+ + +LVQIA P R + +++++++H RIN FG
Sbjct: 296 QKYLAFEKFLEENPEWRDKVMLVQIAVPTRNDVPEYQKLKSQVHELVGRINGRFGSVSSV 355
Query: 413 PVVFIDKPVTLSERAAYYTIAECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPK 472
P+ +D V + A Y I + ++VT++RDGMNL YE++ C++ K
Sbjct: 356 PIHHLDCSVDFNYLCALYAITDVMLVTSLRDGMNLVSYEFVACQKA-------------K 402
Query: 473 KSMLVVSEFIGCSPSL-SGAIRVNPWNIEATAEAMHEAIQMNEAEKQLRHEKHYRYVSTH 531
K +LV+SEF G SL +GA+ VNPWNI + A+ EA+ M++ E++ RH +++YV TH
Sbjct: 403 KGVLVLSEFAGAGQSLGAGALLVNPWNITEVSSAIKEALNMSDEERETRHRHNFQYVKTH 462
Query: 532 DVAYWARSFFQDMERTCKDHFKRRCWGIGLSFGFRVVALDPNFRKLSIDAIVSAYLRSKS 591
WA F ++ I + R + L ++ Y +S +
Sbjct: 463 SAQKWADDFMSELN------------DIIVEAELRTRNIPLE---LPEQDVIQQYSKSNN 507
Query: 592 RAILFDYDGTVM-PQTSINKAPS----QAVISIINTLCNDARNTVFVVSGRGRDCLGKWF 646
R ++ + GT+ P+ S K + + LC+D + TV V+S G+D L K F
Sbjct: 508 RLLILGFYGTLTEPRNSQIKEMDLGLHPELKETLKALCSDPKTTVVVLSRSGKDILDKNF 567
Query: 647 SPCKKLGIAAEHGYFMRWSADEEWQNCGQSVDFGWIQIAEPVMKLYTESTDGSYIEIKES 706
+ +AAE+G F+R ++ E + ++ W+ + V K +T+ T SY+E E+
Sbjct: 568 GE-YNIWLAAENGMFLRHTSGEWVTTMPEHMNLDWVDGVKNVFKYFTDRTPRSYVEKSET 626
Query: 707 ALVWHHRDADPGFGSSQAKELLDHL-ESVLANEPAAVKSGQFIVEVKPQGVSKGVVAEKI 765
+LVW++ AD FG +QA+++L HL ++N V GQ VEV GV+KG +I
Sbjct: 627 SLVWNYEYADVEFGRAQARDMLQHLWAGPISNASVDVVRGQKSVEVHAIGVTKGAAIGRI 686
Query: 766 FTTMAESGRHA---DFVLCIGDDRS-DEDMF-----EIIGNATSSGVLSSNA-------- 808
+ + DFV C G DED++ EI+ SS S++
Sbjct: 687 LGEIVHNKSMTTPIDFVFCSGYFLEKDEDVYTFFEPEILSKKKSSSSNYSDSDKKVSSNL 746
Query: 809 ------SVFACTVGQKPSKAKYYLDDAAEVVTMLEALAEAS 843
+ F+C +GQ +KA+Y LD + +VV++L LA A+
Sbjct: 747 VDLKGENYFSCAIGQARTKARYVLDSSNDVVSLLHKLAVAN 787
|
Length = 797 |
| >gnl|CDD|215556 PLN03064, PLN03064, alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional | Back alignment and domain information |
|---|
Score = 503 bits (1297), Expect = e-165
Identities = 259/758 (34%), Positives = 419/758 (55%), Gaps = 70/758 (9%)
Query: 62 RVIIVANQLPVKAKRRPDNKGWSFSWDEDSL---LLQLKDGLPEDMEVIYVGSLKVDV-D 117
R+++VAN+LPV A RR ++ WS L LL +K+ E ++G V+V D
Sbjct: 95 RLLVVANRLPVSAVRRGEDS-WSLEISAGGLVSALLGVKE-----FEARWIGWAGVNVPD 148
Query: 118 LSEQDDVSQLLLDRFKCVPAFLPPDILTKFYHGFCKQHLWPLFHYM-LPF----SATHGG 172
Q +++ L ++ +C+P FL +I+ ++Y+G+C LWPLFHY+ LP + T
Sbjct: 149 EVGQKALTKALAEK-RCIPVFLDEEIVHQYYNGYCNNILWPLFHYLGLPQEDRLATT--- 204
Query: 173 RFDRSLWEAYVSANKIFSQRVIEVINPEDDYVWIHDYHLMVLPTFLRRRFTRLRMGFFLH 232
R +S + AY AN++F+ V E E D VW HDYHLM LP L+ + +++G+FLH
Sbjct: 205 RSFQSQFAAYKKANQMFADVVNEHYE-EGDVVWCHDYHLMFLPKCLKEYNSNMKVGWFLH 263
Query: 233 SPFPSSEIYRTLPVREEILKALLNADLIGFHTFDYARHFLSCCSRMLGLEYQSKRGYIGL 292
+PFPSSEI+RTLP R E+L+++L ADL+GFHT+DYARHF+S C+R+LGLE + G+
Sbjct: 264 TPFPSSEIHRTLPSRSELLRSVLAADLVGFHTYDYARHFVSACTRILGLEGTPE----GV 319
Query: 293 EYYGRTVGIKIMPVGIHMGQIESVLRLADKDWRVQELKQQFEGKTVLLGVDDMDIFKGVD 352
E GR + P+GI + L ++ELK++F G+ V+LGVD +D+ KG+
Sbjct: 320 EDQGRLTRVAAFPIGIDSDRFIRALETPQVQQHIKELKERFAGRKVMLGVDRLDMIKGIP 379
Query: 353 LKLLAMEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYE 412
K+LA E L+++P+W+ + VL+QIA P R + +++ +++H RIN FG
Sbjct: 380 QKILAFEKFLEENPEWRDKVVLLQIAVPTRTDVPEYQKLTSQVHEIVGRINGRFGTLTAV 439
Query: 413 PVVFIDKPVTLSERAAYYTIAECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPK 472
P+ +D+ + A Y + + +VT++RDGMNL YE++ C+ K
Sbjct: 440 PIHHLDRSLDFHALCALYAVTDVALVTSLRDGMNLVSYEFVACQ-------------DSK 486
Query: 473 KSMLVVSEFIGCSPSL-SGAIRVNPWNIEATAEAMHEAIQMNEAEKQLRHEKHYRYVSTH 531
K +L++SEF G + SL +GAI VNPWNI A ++ +A+ M E E++ RH ++ +V+TH
Sbjct: 487 KGVLILSEFAGAAQSLGAGAILVNPWNITEVAASIAQALNMPEEEREKRHRHNFMHVTTH 546
Query: 532 DVAYWARSFFQDMERTCKDHFKRRCWGIGLSFGFRVVALDPNFRKLSIDAIVSAYLRSKS 591
WA +F ++ T + R + P +L + + YL+S +
Sbjct: 547 TAQEWAETFVSELNDTV------------VEAQLRTRQVPP---QLPPEDAIQRYLQSNN 591
Query: 592 RAILFDYDGTV-MPQTSINKAPSQ----------AVISIINTLCNDARNTVFVVSGRGRD 640
R ++ ++ T+ P + + Q + + LC+D + T+ V+SG R
Sbjct: 592 RLLILGFNATLTEPVDTPGRRGDQIKEMELRLHPELKEPLRALCSDPKTTIVVLSGSDRS 651
Query: 641 CLGKWFSPCKKLGIAAEHGYFMRWSADEEWQNCGQSVDFGWIQIAEPVMKLYTESTDGSY 700
L + F + +AAE+G F+R + E + ++ W+ + V + +TE T S+
Sbjct: 652 VLDENFGEF-DMWLAAENGMFLRHTKGEWMTTMPEHLNMDWVDSVKHVFEYFTERTPRSH 710
Query: 701 IEIKESALVWHHRDADPGFGSSQAKELLDHL-ESVLANEPAAVKSGQFIVEVKPQGVSKG 759
E +E++LVW+++ AD FG QA+++L HL ++N V G VEV+P GV+KG
Sbjct: 711 FETRETSLVWNYKYADVEFGRLQARDMLQHLWTGPISNAAVDVVQGSRSVEVRPVGVTKG 770
Query: 760 VVAEKIFTTMAESG---RHADFVLCIGDDRS-DEDMFE 793
++I + S D+VLCIG DED++
Sbjct: 771 AAIDRILGEIVHSKSMTTPIDYVLCIGHFLGKDEDIYT 808
|
Length = 934 |
| >gnl|CDD|233848 TIGR02400, trehalose_OtsA, alpha,alpha-trehalose-phosphate synthase [UDP-forming] | Back alignment and domain information |
|---|
Score = 434 bits (1117), Expect = e-144
Identities = 175/487 (35%), Positives = 269/487 (55%), Gaps = 33/487 (6%)
Query: 62 RVIIVANQLPVKAKRRPDNKGWSFSWDEDSLLLQLKDGLPEDMEVIYVGSLKVDV-DLSE 120
R+I+V+N+LPV R G S L + L L + ++ G V +
Sbjct: 1 RLIVVSNRLPVPITR----GGLEPS--AGGLAVALLGAL-KATGGVWFGWSGKTVEEDEG 53
Query: 121 QDDVSQLLLDRFKCVPAFLPPDILTKFYHGFCKQHLWPLFHYMLPFSATHGGRFDRSLWE 180
+ + L + P FL + + +Y+GF LWPLFHY R+DR WE
Sbjct: 54 EPFLRTELEGKITLAPVFLSEEDVDGYYNGFSNSTLWPLFHYRPDLI-----RYDRKAWE 108
Query: 181 AYVSANKIFSQRVIEVINPEDDYVWIHDYHLMVLPTFLRRRFTRLRMGFFLHSPFPSSEI 240
AY N++F++ + ++ P D VW+HDYHLM+LP LR + ++GFFLH PFPSSEI
Sbjct: 109 AYRRVNRLFAEALAPLLQP-GDIVWVHDYHLMLLPAMLRELGVQNKIGFFLHIPFPSSEI 167
Query: 241 YRTLPVREEILKALLNADLIGFHTFDYARHFLSCCSRMLGLEYQSKRGYIGLEYYGRTVG 300
YRTLP R E+L+ LL DL+GF T+D AR+FLS SR LGLE G+E GRTV
Sbjct: 168 YRTLPWRRELLEGLLAYDLVGFQTYDDARNFLSAVSRELGLETLPN----GVESGGRTVR 223
Query: 301 IKIMPVGIHMGQI-ESVLRLADKDWRVQELKQQFEGKTVLLGVDDMDIFKGVDLKLLAME 359
+ P+GI + + E + + + R+ EL++ +G+ +++GVD +D KG+ +LLA E
Sbjct: 224 VGAFPIGIDVDRFAEQAKKPSVQK-RIAELRESLKGRKLIIGVDRLDYSKGLPERLLAFE 282
Query: 360 HLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDK 419
L++HP+W+G+ VLVQIA P+RG + ++++ ++ RIN FG + P+ ++++
Sbjct: 283 RFLEEHPEWRGKVVLVQIAVPSRGDVPEYQQLRRQVEELVGRINGRFGTLDWTPIRYLNR 342
Query: 420 PVTLSERAAYYTIAECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVS 479
E A Y A+ +VT +RDGMNL EY+ + PK +L++S
Sbjct: 343 SYDREELMALYRAADVGLVTPLRDGMNLVAKEYVAAQD-------------PKDGVLILS 389
Query: 480 EFIGCSPSLSGAIRVNPWNIEATAEAMHEAIQMNEAEKQLRHEKHYRYVSTHDVAYWARS 539
EF G + L+GA+ VNP++I+ A+A+ A+ M E++ RH + +DV W
Sbjct: 390 EFAGAAQELNGALLVNPYDIDGMADAIARALTMPLEEREERHRAMMDKLRKNDVQRWRED 449
Query: 540 FFQDMER 546
F D+
Sbjct: 450 FLSDLNS 456
|
This enzyme catalyzes the key, penultimate step in biosynthesis of trehalose, a compatible solute made as an osmoprotectant in some species in all three domains of life. The gene symbol OtsA stands for osmotically regulated trehalose synthesis A. Trehalose helps protect against both osmotic and thermal stresses, and is made from two glucose subunits. This model excludes glucosylglycerol-phosphate synthase, an enzyme of an analogous osmoprotectant system in many cyanobacterial strains. This model does not identify archaeal examples, as they are more divergent than glucosylglycerol-phosphate synthase. Sequences that score in the gray zone between the trusted and noise cutoffs include a number of yeast multidomain proteins in which the N-terminal domain may be functionally equivalent to this family. The gray zone also includes the OtsA of Cornyebacterium glutamicum (and related species), shown to be responsible for synthesis of only trace amounts of trehalose while the majority is synthesized by the TreYZ pathway; the significance of OtsA in this species is unclear (see Wolf, et al., PMID:12890033) [Cellular processes, Adaptations to atypical conditions]. Length = 456 |
| >gnl|CDD|223457 COG0380, OtsA, Trehalose-6-phosphate synthase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Score = 427 bits (1099), Expect = e-141
Identities = 177/486 (36%), Positives = 270/486 (55%), Gaps = 23/486 (4%)
Query: 62 RVIIVANQLPVKAKRRPDNKGWSFSWDEDSLLLQLKDGLPEDMEVIYVGSLKVDVDLSEQ 121
R+I+V+N+LPVK D L+ LK L ++G E
Sbjct: 16 RLIVVSNRLPVKKTPEGDKGIEFGKRSAGGLVTALK-PLLRVDGGTWIGWSGTTGPTDES 74
Query: 122 DDVSQLLLDRFKCVPAFLPPDILTKFYHGFCKQHLWPLFHYMLPFSATHGGRFDRSLWEA 181
D + + F P L + +Y+GF LWPLFHY + ++R+ W+A
Sbjct: 75 SDDLKERIGEFTSAPVILSDEDYEGYYNGFSNAILWPLFHYFIDD-----VAYERNWWDA 129
Query: 182 YVSANKIFSQRVIEVINPEDDYVWIHDYHLMVLPTFLRRRFTRLRMGFFLHSPFPSSEIY 241
YV N+ F+ +++E+ P D +W+HDYHL+++P LR R ++GFFLH PFPSSE++
Sbjct: 130 YVKVNRKFADKIVEIYEP-GDIIWVHDYHLLLVPQMLRERIPDAKIGFFLHIPFPSSEVF 188
Query: 242 RTLPVREEILKALLNADLIGFHTFDYARHFLSCCSRMLGLEYQSKRGYIGLEYYGRTVGI 301
R LP REEIL+ LL ADLIGF T YAR+FL CSR+LG+ + + G GR V +
Sbjct: 189 RCLPWREEILEGLLGADLIGFQTESYARNFLDLCSRLLGVTGDADIRFNG--ADGRIVKV 246
Query: 302 KIMPVGIHMGQIESVLRLADKDWRVQELKQQFEG-KTVLLGVDDMDIFKGVDLKLLAMEH 360
P+GI + E L+ +V ELK + K +++GVD +D KG+ +LLA E
Sbjct: 247 GAFPIGIDPEEFERALKSPSVQEKVLELKAELGRNKKLIVGVDRLDYSKGIPQRLLAFER 306
Query: 361 LLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDKP 420
LL+++P+W+G+ VL+QIA P+R ++ + ++ +I RIN FG + PV ++ +
Sbjct: 307 LLEEYPEWRGKVVLLQIAPPSREDVEEYQALRLQIEELVGRINGEFGSLSWTPVHYLHRD 366
Query: 421 VTLSERAAYYTIAECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSE 480
+ +E A Y A+ ++VT +RDGMNL EY+ ++ K +L++SE
Sbjct: 367 LDRNELLALYRAADVMLVTPLRDGMNLVAKEYVAAQRD-------------KPGVLILSE 413
Query: 481 FIGCSPSLSGAIRVNPWNIEATAEAMHEAIQMNEAEKQLRHEKHYRYVSTHDVAYWARSF 540
F G + L A+ VNPW+ + A+A+ A+ M+ E++ RHEK + V THDVA WA SF
Sbjct: 414 FAGAASELRDALIVNPWDTKEVADAIKRALTMSLEERKERHEKLLKQVLTHDVARWANSF 473
Query: 541 FQDMER 546
D+ +
Sbjct: 474 LDDLAQ 479
|
Length = 486 |
| >gnl|CDD|216992 pfam02358, Trehalose_PPase, Trehalose-phosphatase | Back alignment and domain information |
|---|
Score = 267 bits (684), Expect = 1e-83
Identities = 109/239 (45%), Positives = 146/239 (61%), Gaps = 7/239 (2%)
Query: 595 LFDYDGTVMPQ--TSINKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSPCKKL 652
DYDGT+ P PS ++S++N L +D NTV ++SGR R F L
Sbjct: 1 FLDYDGTLSPIVEDPDAAVPSDRLLSLLNRLASDPPNTVAIISGRSRAFE-DLFFGVPNL 59
Query: 653 GIAAEHGYFMRWSADEEWQNCGQSVDFGWIQIAEPVMKLYTESTDGSYIEIKESALVWHH 712
G+AAEHG F+R E+W N + D W + +++ YTE T GSYIE K+SAL WH+
Sbjct: 60 GLAAEHGAFIRDPGGEDWTNLAEVEDLDWKKEVAAILEEYTERTPGSYIEDKKSALAWHY 119
Query: 713 RDADPGFGSSQAKELLDHLESVLANEPA-AVKSGQFIVEVKPQGVSKGVVAEKIFTTMAE 771
R+AD FG QAKEL +HLESVL + P V G+ +VEV+P GVSKG AE++ +
Sbjct: 120 RNADDDFGVFQAKELAEHLESVLKDYPDVRVTQGKKVVEVRPVGVSKGKAAERLLEELGS 179
Query: 772 SGRHADFVLCIGDDRSDEDMFEIIGNATSSGVLSSNASVFACTVGQKPSKAKYYLDDAA 830
+G DF LCIGDDR+DEDMF+++ SG+ + V A +VG KPS AKY+LDD +
Sbjct: 180 AGSPPDFPLCIGDDRTDEDMFDVVNPTKMSGL---SIEVGATSVGSKPSSAKYFLDDPS 235
|
This family consist of trehalose-phosphatases EC:3.1.3.12 these enzyme catalyze the de-phosphorylation of trehalose-6-phosphate to trehalose and orthophosphate. The aligned region is present in trehalose-phosphatases and comprises the entire length of the protein it is also found in the C-terminus of trehalose-6-phosphate synthase EC:2.4.1.15 adjacent to the trehalose-6-phosphate synthase domain - pfam00982. It would appear that the two equivalent genes in the E. coli otsBA operon otsA the trehalose-6-phosphate synthase and otsB trehalose-phosphatase (this family) have undergone gene fusion in most eukaryotes. Trehalose is a common disaccharide of bacteria, fungi and invertebrates that appears to play a major role in desiccation tolerance. Length = 235 |
| >gnl|CDD|131451 TIGR02398, gluc_glyc_Psyn, glucosylglycerol-phosphate synthase | Back alignment and domain information |
|---|
Score = 227 bits (580), Expect = 1e-65
Identities = 121/423 (28%), Positives = 204/423 (48%), Gaps = 42/423 (9%)
Query: 139 LPPDILTKFYHGFCKQHLWPLFHYMLPFSATHGGRFDRSLWEAYVSANKIFSQRVIEVIN 198
L + + FYH K+ WP+ H + +F W+ ++ N+ F++
Sbjct: 77 LSKEQVDIFYHITSKEAFWPILH-----TFPERFQFREDDWQVFLKVNRAFAEAACLEAA 131
Query: 199 PEDDYVWIHDYHLMVLPTFLRRRFTRLRMGFFLHSPFPSSEIYRTLPVREEILKALLNAD 258
E VW+HDY+L ++P ++R+ L++ FF H+PFPS++++ LP RE+I+ +LL D
Sbjct: 132 -EGATVWVHDYNLWLVPGYIRQLRPDLKIAFFHHTPFPSADVFNILPWREQIIGSLLCCD 190
Query: 259 LIGFHTFDYARHFLSCCSRMLGLEYQSK-----------------RGYIGLEYYGRTVGI 301
IGFH Y +F+ ++ L+ S+ R L+ R V +
Sbjct: 191 YIGFHIPRYVENFVDAARGLMPLQTVSRQNVDPRFITVGTALGEERMTTALDTGNRVVKL 250
Query: 302 KIMPVGIHMGQIESVLRLADKDWRVQELKQQFEGKTVLLGVDDMDIFKGVDLKLLAMEHL 361
PVG +I S L A ++ ++ + G ++L + +D KG+ KL A E L
Sbjct: 251 GAHPVGTDPERIRSALAAASIREMMERIRSELAGVKLILSAERVDYTKGILEKLNAYERL 310
Query: 362 LKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDKPV 421
L++ P+ G+ LV PA +E+Q +I RIN F R G+ P+ F + +
Sbjct: 311 LERRPELLGKVTLVTACVPAASGMTIYDELQGQIEQAVGRINGRFARIGWTPLQFFTRSL 370
Query: 422 TLSERAAYYTIAECVVVTAVRDGMNLTPYEYIV---CRQGVSGSESSSESSAPKKSMLVV 478
E +A++ +A+ + +T +RDG+NL EY+ GV LV+
Sbjct: 371 PYEEVSAWFAMADVMWITPLRDGLNLVAKEYVAAQGLLDGV----------------LVL 414
Query: 479 SEFIGCSPSLSGAIRVNPWNIEATAEAMHEAIQMNEAEKQLRHEKHYRYVSTHDVAYWAR 538
SEF G + L GA+ NP++ E ++ A+ M +AE+Q R + + V+ +DV WA
Sbjct: 415 SEFAGAAVELKGALLTNPYDPVRMDETIYVALAMPKAEQQARMREMFDAVNYYDVQRWAD 474
Query: 539 SFF 541
F
Sbjct: 475 EFL 477
|
Glucosylglycerol-phosphate synthase catalyzes the key step in the biosynthesis of the osmolyte glucosylglycerol. It is known in several cyanobacteria and in Pseudomonas anguilliseptica. The enzyme is closely related to the alpha,alpha-trehalose-phosphate synthase, likewise involved in osmolyte biosynthesis, of E. coli and many other bacteria. A close homolog from Xanthomonas campestris is excluded from this model and scores between trusted and noise. Length = 487 |
| >gnl|CDD|182249 PRK10117, PRK10117, trehalose-6-phosphate synthase; Provisional | Back alignment and domain information |
|---|
Score = 210 bits (536), Expect = 1e-59
Identities = 116/403 (28%), Positives = 214/403 (53%), Gaps = 26/403 (6%)
Query: 147 FYHGFCKQHLWPLFHYMLPFSATHGGRFDRSLWEAYVSANKIFSQRVIEVINPEDDYVWI 206
+Y+ F LWP FHY L +F R WE Y+ N + + +++ ++ DD +WI
Sbjct: 76 YYNQFSNAVLWPAFHYRLDLV-----QFQRPAWEGYLRVNALLADKLLPLLKD-DDIIWI 129
Query: 207 HDYHLMVLPTFLRRRFTRLRMGFFLHSPFPSSEIYRTLPVREEILKALLNADLIGFHTFD 266
HDYHL+ + LR+R R+GFFLH PFP+ EI+ LP +E+L+ L + DL+GF T +
Sbjct: 130 HDYHLLPFASELRKRGVNNRIGFFLHIPFPTPEIFNALPPHDELLEQLCDYDLLGFQTEN 189
Query: 267 YARHFLSCCSRMLGLEYQSKRGYIGLEYYGRTVGIKIMPVGIHMGQIESVLRLADKDW-- 324
FL C S + + +S + + +G+ ++ P+GI + + + + A
Sbjct: 190 DRLAFLDCLSNLTRVTTRSGKSHTA---WGKAFRTEVYPIGI---EPDEIAKQAAGPLPP 243
Query: 325 RVQELKQQFEGKTVLLGVDDMDIFKGVDLKLLAMEHLLKQHPKWQGRAVLVQIANPARGR 384
++ +LK + + + V+ +D KG+ + LA E LL+++P+ G+ QIA +RG
Sbjct: 244 KLAQLKAELKNVQNIFSVERLDYSKGLPERFLAYEALLEKYPQHHGKIRYTQIAPTSRGD 303
Query: 385 GKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDKPVTLSERAAYYTIAECVVVTAVRDG 444
+ ++I+ ++ RIN +G+ G+ P+ ++++ + ++ +VT +RDG
Sbjct: 304 VQAYQDIRHQLETEAGRINGKYGQLGWTPLYYLNQHFDRKLLMKIFRYSDVGLVTPLRDG 363
Query: 445 MNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIGCSPSLSGAIRVNPWNIEATAE 504
MNL EY+ ++ + + P +LV+S+F G + L+ A+ VNP++ + A
Sbjct: 364 MNLVAKEYV----------AAQDPANP--GVLVLSQFAGAANELTSALIVNPYDRDEVAA 411
Query: 505 AMHEAIQMNEAEKQLRHEKHYRYVSTHDVAYWARSFFQDMERT 547
A+ A+ M AE+ RH + + +D+ +W F D+++
Sbjct: 412 ALDRALTMPLAERISRHAEMLDVIVKNDINHWQECFISDLKQI 454
|
Length = 474 |
| >gnl|CDD|224789 COG1877, OtsB, Trehalose-6-phosphatase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Score = 163 bits (414), Expect = 3e-45
Identities = 79/263 (30%), Positives = 122/263 (46%), Gaps = 19/263 (7%)
Query: 582 IVSAYLRSKSRAILFDYDGTVMP--QTSINKAPSQAVISIINTLCNDARNTVFVVSGRGR 639
++ YL ++ R + DYDGT+ P ++S++ L +D RN V ++SGR
Sbjct: 9 LLEPYLNARKRLLFLDYDGTLTEIVPHPEAAVPDDRLLSLLQDLASDPRNVVAIISGRSL 68
Query: 640 DCLGKWFSPCKKLGIAAEHGYFMRWSADEEWQNCGQSVDFGWIQIAEPVMKLYTESTDGS 699
L + F +G+ AEHG +R + W N + D W++ +++ Y E T GS
Sbjct: 69 AELERLFGV-PGIGLIAEHGAEVRDPNGKWWINLAEEADLRWLKEVAAILEYYVERTPGS 127
Query: 700 YIEIKESALVWHHRDADPGFGSSQAKELLDHLESVLANEPAAVKSGQFIVEVKPQGVSKG 759
YIE K A+ H+R+A+ G++ A L + L V G+ +VE++P GVSKG
Sbjct: 128 YIERKGFAVALHYRNAEDDEGAALALAEAATLINELK---LRVTPGKMVVELRPPGVSKG 184
Query: 760 VVAEKIFTTMAESGRHADFVLCIGDDRSDEDMFEIIGNATSSGVLSSNASVFACTVGQKP 819
+ I M E F + GDD +DED F + S V VG
Sbjct: 185 AAIKYI---MDELPFDGRFPIFAGDDLTDEDAFAAVNKLDSITV----------KVGVGS 231
Query: 820 SKAKYYLDDAAEVVTMLEALAEA 842
++AK+ L + L L EA
Sbjct: 232 TQAKFRLAGVYGFLRSLYKLLEA 254
|
Length = 266 |
| >gnl|CDD|233092 TIGR00685, T6PP, trehalose-phosphatase | Back alignment and domain information |
|---|
Score = 107 bits (268), Expect = 5e-26
Identities = 79/262 (30%), Positives = 123/262 (46%), Gaps = 29/262 (11%)
Query: 589 SKSRAILFDYDGTVMPQTSINKAPSQAVIS-----IINTLCNDARNTVFVVSGRGRDCLG 643
++ RA FDYDGT+ I P AV+S I+ L N ++++SGR L
Sbjct: 1 ARKRAFFFDYDGTLSE---IVPDPDAAVVSDRLLTILQKLAARPHNAIWIISGR--KFLE 55
Query: 644 KW-FSPCKKLGIAAEHGYFMRWSAD-EEWQNCGQSVDFGWIQIAEPVMKLYTESTDGSYI 701
KW LG+A EHG M+ + ++W N + + W A + + T G +I
Sbjct: 56 KWLGVKLPGLGLAGEHGCEMKDNGSCQDWVNLTEKIPS-WKVRANELREEITTR-PGVFI 113
Query: 702 EIKESALVWHHRDA-DPGFGSSQAKELLDHLESVLANEPAAVKSGQFIVEVKPQGVSKGV 760
E K AL WH+R A P +AKEL E +L+ V G+ +VE+KP+ V+KG
Sbjct: 114 ERKGVALAWHYRQAPVPELARFRAKELK---EKILSFTDLEVMDGKAVVELKPRFVNKGE 170
Query: 761 VAEKIFTTMAESGRHADFVLCIGDDRSDEDMFEIIGNATSSGVLSSNASVFACTV--GQK 818
+ +++ SG + +GDD +DED F ++ N N + + G K
Sbjct: 171 IVKRLLWHQPGSGISP---VYLGDDITDEDAFRVVNN------QWGNYGFYPVPIGSGSK 221
Query: 819 PSKAKYYLDDAAEVVTMLEALA 840
+ AK++L +V+ L L
Sbjct: 222 KTVAKFHLTGPQQVLEFLGLLV 243
|
Trehalose, a neutral disaccharide of two glucose residues, is an important osmolyte for dessication and/or salt tolerance in a number of prokaryotic and eukaryotic species, including E. coli, Saccharomyces cerevisiae, and Arabidopsis thaliana. Many bacteria also utilize trehalose in the synthesis of trehalolipids, specialized cell wall constituents believed to be involved in the uptake of hydrophobic substances. Trehalose dimycolate (TDM, cord factor) and related substances are important constituents of the mycobacterial waxy coat and responsible for various clinically important immunological interactions with host organism. This enzyme, trehalose-phosphatase, removes a phosphate group in the final step of trehalose biosynthesis. The trehalose-phosphatase from Saccharomyces cerevisiae is fused to the synthase. At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes [Cellular processes, Adaptations to atypical conditions]. Length = 244 |
| >gnl|CDD|233434 TIGR01484, HAD-SF-IIB, HAD-superfamily hydrolase, subfamily IIB | Back alignment and domain information |
|---|
Score = 75.1 bits (185), Expect = 3e-15
Identities = 52/209 (24%), Positives = 89/209 (42%), Gaps = 15/209 (7%)
Query: 593 AILFDYDGT-VMPQTSINKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSPCKK 651
+ FD DGT + P S I + L A V +V+GR + +
Sbjct: 1 LLFFDLDGTLLDPNAHE---LSPETIEALERLRE-AGVKVVLVTGRSLAEIKELLKQLP- 55
Query: 652 LGIAAEHGYFMRWSADEEWQNCGQSVDF--GWIQIAEPVMKLYTESTDGSYIEIKESALV 709
L + AE+G + + + + + G + +K +E G++IE K A+
Sbjct: 56 LPLIAENGALIFYPGEILYIEPSDVFEEILGIKEEIGAELKSLSEHYVGTFIEDKAIAVA 115
Query: 710 WHHRDADPGFGSSQAKELLDHLESVLANEPA--AVKSGQFIVEVKPQGVSKGVVAEKIFT 767
H+ A+ G ++ + LE + N+ A+ G+ +EV P GV KG + +
Sbjct: 116 IHYVGAELGQEL--DSKMRERLEKIGRNDLELEAIYVGKTDLEVLPAGVDKGSALQAL-- 171
Query: 768 TMAESGRHADFVLCIGDDRSDEDMFEIIG 796
+ E D +L GD +DE+MFE+ G
Sbjct: 172 -LKELNGKRDEILAFGDSGNDEEMFEVAG 199
|
This subfamily falls within the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The Class II subfamilies are characterized by a domain that is located between the second and third conserved catalytic motifs of the superfamily domain. The IIB subfamily is distinguished from the IIA subfamily (TIGR01460) by homology and the predicted secondary structure of this domain by PSI-PRED. The IIB subfamily's Class II domain has the following predicted structure: Helix-Sheet-Sheet-(Helix or Sheet)-Helix-Sheet-(variable)-Helix-Sheet-Sheet. The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing OMNI|TC0379 and OMNI|SA2196 whose relationship to the other groups is unclear [Unknown function, Enzymes of unknown specificity]. Length = 204 |
| >gnl|CDD|182291 PRK10187, PRK10187, trehalose-6-phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Score = 56.7 bits (137), Expect = 1e-08
Identities = 43/157 (27%), Positives = 67/157 (42%), Gaps = 39/157 (24%)
Query: 697 DGSYIEIKESALVWHHRDADPGFGSSQAKELLDHLESVLA--------NEPAAVKSGQFI 748
G+ +E K A H+R QA + H +++LA A++ G+ +
Sbjct: 118 PGAELEAKGMAFALHYR---------QAPQ---HEDALLALAQRITQIWPQLALQPGKCV 165
Query: 749 VEVKPQGVSKGVVAEKIFTTMAES---GRHADFVLCIGDDRSDEDMFEIIGNATSSGVLS 805
VE+KP+G +KG E I M E+ GR FV GDD +DE F ++ V
Sbjct: 166 VEIKPRGTNKG---EAIAAFMQEAPFAGRTPVFV---GDDLTDEAGFAVVNRLGGISV-- 217
Query: 806 SNASVFACTVGQKPSKAKYYLDDAAEVVTMLEALAEA 842
VG ++A + L +V + LE + A
Sbjct: 218 --------KVGTGATQASWRLAGVPDVWSWLEMITTA 246
|
Length = 266 |
| >gnl|CDD|177812 PLN02151, PLN02151, trehalose-phosphatase | Back alignment and domain information |
|---|
Score = 57.0 bits (137), Expect = 2e-08
Identities = 73/273 (26%), Positives = 119/273 (43%), Gaps = 44/273 (16%)
Query: 590 KSRAILFDYDGTVMPQTSINKAPSQAVISIINTLCNDARNTV---------FVVSGRGRD 640
K + DYDGT+ P I P +A +S RNTV +VSGR R+
Sbjct: 97 KQIVMFLDYDGTLSP---IVDDPDRAFMS------KKMRNTVRKLAKCFPTAIVSGRCRE 147
Query: 641 CLGKWFSPCKKLGIAAEHGYFMR-------WSADEEWQNCGQSVDFGWIQIAEPVMKLY- 692
+ F +L A HG ++ + + + C + +F + I E KL
Sbjct: 148 KVSS-FVKLTELYYAGSHGMDIKGPEQGSKYKKENQSLLCQPATEFLPV-INEVYKKLVE 205
Query: 693 -TESTDGSYIEIKESALVWHHRDADPGFGSSQAKELLDHLESVLANEPA-AVKSGQFIVE 750
T+S G+ +E + H R + ++ +L + + SVL N P + G+ ++E
Sbjct: 206 KTKSIPGAKVENNKFCASVHFRCVE----ENKWSDLANQVRSVLKNYPKLMLTQGRKVLE 261
Query: 751 VKPQ-GVSKGVVAEKIFTTMAESGRHADFVLCIGDDRSDEDMFEIIGNATSS-GVLSSNA 808
++P KG E + ++ + F + IGDDR+DED F+I+ + G+L S
Sbjct: 262 IRPIIKWDKGKALEFLLESLGYANCTDVFPIYIGDDRTDEDAFKILRDKKQGLGILVSKY 321
Query: 809 SVFACTVGQKPSKAKYYLDDAAEVVTMLEALAE 841
+ K + A Y L + EV+ LE L E
Sbjct: 322 A--------KETNASYSLQEPDEVMEFLERLVE 346
|
Length = 354 |
| >gnl|CDD|178591 PLN03017, PLN03017, trehalose-phosphatase | Back alignment and domain information |
|---|
Score = 55.8 bits (134), Expect = 4e-08
Identities = 75/282 (26%), Positives = 117/282 (41%), Gaps = 57/282 (20%)
Query: 588 RSKSRAILFDYDGTVMPQTSINKAPSQAVISIINTLCNDARNTV---------FVVSGRG 638
R K + DYDGT+ P I P +A +S + R TV +V+GR
Sbjct: 108 RGKQIVMFLDYDGTLSP---IVDDPDKAFMS------SKMRRTVKKLAKCFPTAIVTGR- 157
Query: 639 RDCLGKWFSPCK--KLGIAAEHGY--------FMRWSADEE---WQNCGQ---SVDFGWI 682
C+ K ++ K +L A HG F R ++ +Q +D +
Sbjct: 158 --CIDKVYNFVKLAELYYAGSHGMDIKGPAKGFSRHKRVKQSLLYQPANDYLPMIDEVYR 215
Query: 683 QIAEPVMKLYTESTDGSYIEIKESALVWHHRDADPGFGSSQAKELLDHLESVLANEPA-A 741
Q+ E T+ST G+ +E + H R D + EL+ + SVL N P
Sbjct: 216 QLLEK-----TKSTPGAKVENHKFCASVHFRCVD----EKKWSELVLQVRSVLKNFPTLK 266
Query: 742 VKSGQFIVEVKPQ-GVSKGVVAEKIFTTMAESGRHADFVLCIGDDRSDEDMFEII-GNAT 799
+ G+ + E++P KG E + ++ + F + IGDDR+DED F+++
Sbjct: 267 LTQGRKVFEIRPMIEWDKGKALEFLLESLGFGNTNNVFPVYIGDDRTDEDAFKMLRDRGE 326
Query: 800 SSGVLSSNASVFACTVGQKPSKAKYYLDDAAEVVTMLEALAE 841
G+L S K + A Y L D +EV+ L L E
Sbjct: 327 GFGILVSKFP--------KDTDASYSLQDPSEVMDFLARLVE 360
|
Length = 366 |
| >gnl|CDD|215317 PLN02580, PLN02580, trehalose-phosphatase | Back alignment and domain information |
|---|
Score = 55.6 bits (134), Expect = 6e-08
Identities = 75/289 (25%), Positives = 128/289 (44%), Gaps = 55/289 (19%)
Query: 583 VSAYLRSKSRAILFDYDGTVMPQTSINKAPSQAVISIINTLCNDARNTV---------FV 633
++ + + K A+ DYDGT+ P I P +A++S + R+ V +
Sbjct: 111 IANFAKGKKIALFLDYDGTLSP---IVDDPDRALMS------DAMRSAVKNVAKYFPTAI 161
Query: 634 VSGRGRDCLGKWFSPCKKLGIAAEHGYFM----RWSADEEWQNCGQSVD--------FG- 680
+SGR RD + + +L A HG + R S + NC +S D F
Sbjct: 162 ISGRSRDKVYE-LVGLTELYYAGSHGMDIMGPVRESVSNDHPNCIKSTDQQGKEVNLFQP 220
Query: 681 ---WIQIAEPVMKLYTESTD---GSYIEIKESALVWHHRDADPGFGSSQAKELLDHLESV 734
++ + + V + EST G+ +E + + H+R+ D A+ + D L+
Sbjct: 221 ASEFLPMIDEVFRSLVESTKDIKGAKVENHKFCVSVHYRNVDEKNWPLVAQCVHDVLK-- 278
Query: 735 LANEPAAVKS-GQFIVEVKPQ-GVSKGVVAEKIFTTMAESGRHADFVLCIGDDRSDEDMF 792
P + G+ ++EV+P +KG E + ++ S + IGDDR+DED F
Sbjct: 279 --KYPRLRLTHGRKVLEVRPVIDWNKGKAVEFLLESLGLSNCDDVLPIYIGDDRTDEDAF 336
Query: 793 EII--GNATSSGVLSSNASVFACTVGQKPSKAKYYLDDAAEVVTMLEAL 839
+++ GN G+L S+ K S A Y L D +EV+ L++L
Sbjct: 337 KVLREGN-RGYGILVSSVP--------KESNAFYSLRDPSEVMEFLKSL 376
|
Length = 384 |
| >gnl|CDD|215556 PLN03064, PLN03064, alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional | Back alignment and domain information |
|---|
Score = 48.3 bits (115), Expect = 2e-05
Identities = 18/48 (37%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
Query: 799 TSSGVLSSNA-SVFACTVGQKPSKAKYYLDDAAEVVTMLEALAEASAP 845
VL + F+C VG+K S A+Y L + +VV+ L+ LA AS+
Sbjct: 885 IGWSVLDLKGENYFSCAVGRKRSNARYLLGSSDDVVSFLKELANASSS 932
|
Length = 934 |
| >gnl|CDD|223635 COG0561, Cof, Predicted hydrolases of the HAD superfamily [General function prediction only] | Back alignment and domain information |
|---|
Score = 46.3 bits (110), Expect = 3e-05
Identities = 20/68 (29%), Positives = 33/68 (48%), Gaps = 7/68 (10%)
Query: 742 VKSGQFIVEVKPQGVSKGVVAEKIFTTMAESGRHADFVLCIGDDRSDEDMFEIIGNATSS 801
SG +++ P+GVSKG +++ + G + V+ GD +D +M E+ G
Sbjct: 174 SSSGPISLDITPKGVSKGYALQRLAKLL---GIKLEEVIAFGDSTNDIEMLEVAGL---- 226
Query: 802 GVLSSNAS 809
GV NA
Sbjct: 227 GVAMGNAD 234
|
Length = 264 |
| >gnl|CDD|219777 pfam08282, Hydrolase_3, haloacid dehalogenase-like hydrolase | Back alignment and domain information |
|---|
Score = 44.9 bits (107), Expect = 7e-05
Identities = 25/87 (28%), Positives = 39/87 (44%), Gaps = 7/87 (8%)
Query: 723 QAKELLDHLESVLANEPAAVKSGQFIVEVKPQGVSKGVVAEKIFTTMAESGRHADFVLCI 782
EL L+ + + SG +E+ P+GVSKG + + + G + V+
Sbjct: 152 DLDELEKELKELFGSLITITSSGPGYLEIMPKGVSKGTALKALAKHL---GIDLEEVIAF 208
Query: 783 GDDRSDEDMFEIIGNATSSGVLSSNAS 809
GD +D +M E+ G GV NAS
Sbjct: 209 GDGENDIEMLELAGL----GVAMGNAS 231
|
This family contains haloacid dehalogenase-like hydrolase enzymes. Length = 254 |
| >gnl|CDD|99974 cd03801, GT1_YqgM_like, This family is most closely related to the GT1 family of glycosyltransferases and named after YqgM in Bacillus licheniformis about which little is known | Back alignment and domain information |
|---|
Score = 43.9 bits (104), Expect = 2e-04
Identities = 45/255 (17%), Positives = 82/255 (32%), Gaps = 44/255 (17%)
Query: 202 DYVWIHDYHLMVLPTFLRRRFTRLRMGFFLHSPFPSSEIYRTLPVREEILKALLNADLIG 261
D V HD+ ++ R + + +H + + +
Sbjct: 87 DVVHAHDWLALLAAALAARLL-GIPLVLTVHGLEFGRPGNELGLLLKLAR-------ALE 138
Query: 262 FHTFDYARHFLSCCSRMLGLEYQSKRGYIGLEYYGRTVGIKIMPVGIHMGQIESVLRLAD 321
A + S E + I ++P G+ + R A
Sbjct: 139 RRALRRADRII-AVSEATREELRE-------LGGVPPEKITVIPNGVDTERFRPAPRAAR 190
Query: 322 KDWRVQELKQQFEGKTVL-LGVDDMDIFKGVDLKLLAMEHLLKQHPKWQGRAVLVQIANP 380
+ + E + +L +G + KGVDL L A+ L K++P R V+V
Sbjct: 191 RRLGIPE-----DEPVILFVGR--LVPRKGVDLLLEALAKLRKEYPDV--RLVIV----- 236
Query: 381 ARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDKPVTLSERAAYYTIAECVVVTA 440
G G EE++A + + V F+ V + A Y A+ V+ +
Sbjct: 237 --GDGPLREELEALAAE--LGLGD--------RVTFLGF-VPDEDLPALYAAADVFVLPS 283
Query: 441 VRDGMNLTPYEYIVC 455
+ +G L E +
Sbjct: 284 LYEGFGLVLLEAMAA 298
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found mainly in certain bacteria and archaea. Length = 374 |
| >gnl|CDD|215979 pfam00534, Glycos_transf_1, Glycosyl transferases group 1 | Back alignment and domain information |
|---|
Score = 40.3 bits (95), Expect = 0.001
Identities = 28/122 (22%), Positives = 47/122 (38%), Gaps = 22/122 (18%)
Query: 335 GKTVLLGVDDMDIFKGVDLKLLAMEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAE 394
K ++L V + KG+DL L A L +QHP + V+V G G++ ++++
Sbjct: 1 DKPIILFVGRLVPEKGLDLLLEAFALLKEQHPNL--KLVIV-------GDGEEEKKLKKL 51
Query: 395 IHATCKRINETF-GRPGYEPVVFIDKPVTLSERAAYYTIAECVVVTAVRDGMNLTPYEYI 453
N F G E + Y IA+ V+ + +G L E +
Sbjct: 52 ALKLGLEDNVIFVGFVPDEDL------------IELYRIADLFVLPSRYEGFGLVLLEAM 99
Query: 454 VC 455
Sbjct: 100 AA 101
|
Mutations in this domain of human PIGA lead to disease (Paroxysmal Nocturnal haemoglobinuria). Members of this family transfer activated sugars to a variety of substrates, including glycogen, Fructose-6-phosphate and lipopolysaccharides. Members of this family transfer UDP, ADP, GDP or CMP linked sugars. The eukaryotic glycogen synthases may be distant members of this family. Length = 158 |
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 856 | |||
| PLN02205 | 854 | alpha,alpha-trehalose-phosphate synthase [UDP-form | 100.0 | |
| PLN03064 | 934 | alpha,alpha-trehalose-phosphate synthase (UDP-form | 100.0 | |
| PLN03063 | 797 | alpha,alpha-trehalose-phosphate synthase (UDP-form | 100.0 | |
| PRK14501 | 726 | putative bifunctional trehalose-6-phosphate syntha | 100.0 | |
| KOG1050 | 732 | consensus Trehalose-6-phosphate synthase component | 100.0 | |
| PRK10117 | 474 | trehalose-6-phosphate synthase; Provisional | 100.0 | |
| TIGR02398 | 487 | gluc_glyc_Psyn glucosylglycerol-phosphate synthase | 100.0 | |
| PF00982 | 474 | Glyco_transf_20: Glycosyltransferase family 20; In | 100.0 | |
| COG0380 | 486 | OtsA Trehalose-6-phosphate synthase [Carbohydrate | 100.0 | |
| TIGR02400 | 456 | trehalose_OtsA alpha,alpha-trehalose-phosphate syn | 100.0 | |
| cd03788 | 460 | GT1_TPS Trehalose-6-Phosphate Synthase (TPS) is a | 100.0 | |
| TIGR02468 | 1050 | sucrsPsyn_pln sucrose phosphate synthase/possible | 100.0 | |
| COG1877 | 266 | OtsB Trehalose-6-phosphatase [Carbohydrate transpo | 100.0 | |
| PF02358 | 235 | Trehalose_PPase: Trehalose-phosphatase; InterPro: | 100.0 | |
| TIGR00685 | 244 | T6PP trehalose-phosphatase. At least 18 distinct s | 100.0 | |
| PRK10187 | 266 | trehalose-6-phosphate phosphatase; Provisional | 100.0 | |
| PLN03017 | 366 | trehalose-phosphatase | 100.0 | |
| PLN02580 | 384 | trehalose-phosphatase | 100.0 | |
| PLN02151 | 354 | trehalose-phosphatase | 99.98 | |
| PRK15126 | 272 | thiamin pyrimidine pyrophosphate hydrolase; Provis | 99.94 | |
| COG0561 | 264 | Cof Predicted hydrolases of the HAD superfamily [G | 99.94 | |
| PRK10976 | 266 | putative hydrolase; Provisional | 99.94 | |
| PRK10513 | 270 | sugar phosphate phosphatase; Provisional | 99.94 | |
| cd03792 | 372 | GT1_Trehalose_phosphorylase Trehalose phosphorylas | 99.93 | |
| PRK01158 | 230 | phosphoglycolate phosphatase; Provisional | 99.93 | |
| PRK03669 | 271 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 99.93 | |
| PLN02887 | 580 | hydrolase family protein | 99.92 | |
| PF08282 | 254 | Hydrolase_3: haloacid dehalogenase-like hydrolase; | 99.92 | |
| TIGR01484 | 204 | HAD-SF-IIB HAD-superfamily hydrolase, subfamily II | 99.91 | |
| PRK15484 | 380 | lipopolysaccharide 1,2-N-acetylglucosaminetransfer | 99.91 | |
| PRK10530 | 272 | pyridoxal phosphate (PLP) phosphatase; Provisional | 99.91 | |
| PLN02939 | 977 | transferase, transferring glycosyl groups | 99.91 | |
| TIGR02472 | 439 | sucr_P_syn_N sucrose-phosphate synthase, putative, | 99.9 | |
| PLN02316 | 1036 | synthase/transferase | 99.9 | |
| PRK00654 | 466 | glgA glycogen synthase; Provisional | 99.9 | |
| TIGR03449 | 405 | mycothiol_MshA UDP-N-acetylglucosamine: 1L-myo-ino | 99.9 | |
| PRK14098 | 489 | glycogen synthase; Provisional | 99.9 | |
| TIGR01482 | 225 | SPP-subfamily Sucrose-phosphate phosphatase subfam | 99.9 | |
| TIGR00099 | 256 | Cof-subfamily Cof subfamily of IIB subfamily of ha | 99.9 | |
| TIGR02095 | 473 | glgA glycogen/starch synthases, ADP-glucose type. | 99.89 | |
| TIGR01487 | 215 | SPP-like sucrose-phosphate phosphatase-like hydrol | 99.89 | |
| cd03818 | 396 | GT1_ExpC_like This family is most closely related | 99.89 | |
| TIGR01485 | 249 | SPP_plant-cyano sucrose-6F-phosphate phosphohydrol | 99.89 | |
| PRK15427 | 406 | colanic acid biosynthesis glycosyltransferase WcaL | 99.89 | |
| cd03796 | 398 | GT1_PIG-A_like This family is most closely related | 99.89 | |
| PRK14099 | 485 | glycogen synthase; Provisional | 99.88 | |
| TIGR01486 | 256 | HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosph | 99.88 | |
| PLN02871 | 465 | UDP-sulfoquinovose:DAG sulfoquinovosyltransferase | 99.88 | |
| PTZ00174 | 247 | phosphomannomutase; Provisional | 99.88 | |
| TIGR02471 | 236 | sucr_syn_bact_C sucrose phosphate synthase, sucros | 99.87 | |
| PRK00192 | 273 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 99.87 | |
| cd03791 | 476 | GT1_Glycogen_synthase_DULL1_like This family is mo | 99.86 | |
| TIGR03088 | 374 | stp2 sugar transferase, PEP-CTERM/EpsH1 system ass | 99.86 | |
| cd03800 | 398 | GT1_Sucrose_synthase This family is most closely r | 99.86 | |
| TIGR02470 | 784 | sucr_synth sucrose synthase. This model represents | 99.86 | |
| TIGR02149 | 388 | glgA_Coryne glycogen synthase, Corynebacterium fam | 99.86 | |
| cd04951 | 360 | GT1_WbdM_like This family is most closely related | 99.86 | |
| TIGR02463 | 221 | MPGP_rel mannosyl-3-phosphoglycerate phosphatase-r | 99.86 | |
| PLN00142 | 815 | sucrose synthase | 99.86 | |
| PLN02382 | 413 | probable sucrose-phosphatase | 99.85 | |
| cd03806 | 419 | GT1_ALG11_like This family is most closely related | 99.85 | |
| cd03813 | 475 | GT1_like_3 This family is most closely related to | 99.85 | |
| cd05844 | 367 | GT1_like_7 Glycosyltransferases catalyze the trans | 99.85 | |
| PLN02423 | 245 | phosphomannomutase | 99.84 | |
| cd04962 | 371 | GT1_like_5 This family is most closely related to | 99.84 | |
| cd03819 | 355 | GT1_WavL_like This family is most closely related | 99.84 | |
| PLN02949 | 463 | transferase, transferring glycosyl groups | 99.83 | |
| cd03812 | 358 | GT1_CapH_like This family is most closely related | 99.83 | |
| cd03809 | 365 | GT1_mtfB_like This family is most closely related | 99.83 | |
| cd03805 | 392 | GT1_ALG2_like This family is most closely related | 99.83 | |
| PRK15179 | 694 | Vi polysaccharide biosynthesis protein TviE; Provi | 99.82 | |
| PRK15490 | 578 | Vi polysaccharide biosynthesis protein TviE; Provi | 99.82 | |
| PRK10307 | 412 | putative glycosyl transferase; Provisional | 99.81 | |
| cd03801 | 374 | GT1_YqgM_like This family is most closely related | 99.81 | |
| cd04946 | 407 | GT1_AmsK_like This family is most closely related | 99.81 | |
| cd03799 | 355 | GT1_amsK_like This is a family of GT1 glycosyltran | 99.81 | |
| TIGR02918 | 500 | accessory Sec system glycosylation protein GtfA. M | 99.81 | |
| cd03822 | 366 | GT1_ecORF704_like This family is most closely rela | 99.81 | |
| cd03821 | 375 | GT1_Bme6_like This family is most closely related | 99.81 | |
| PRK14502 | 694 | bifunctional mannosyl-3-phosphoglycerate synthase/ | 99.81 | |
| cd03814 | 364 | GT1_like_2 This family is most closely related to | 99.8 | |
| cd03793 | 590 | GT1_Glycogen_synthase_GSY2_like Glycogen synthase, | 99.8 | |
| cd03798 | 377 | GT1_wlbH_like This family is most closely related | 99.8 | |
| cd03817 | 374 | GT1_UGDG_like This family is most closely related | 99.8 | |
| cd03794 | 394 | GT1_wbuB_like This family is most closely related | 99.8 | |
| cd03807 | 365 | GT1_WbnK_like This family is most closely related | 99.79 | |
| PRK10125 | 405 | putative glycosyl transferase; Provisional | 99.79 | |
| cd04949 | 372 | GT1_gtfA_like This family is most closely related | 99.79 | |
| PHA01633 | 335 | putative glycosyl transferase group 1 | 99.79 | |
| cd03820 | 348 | GT1_amsD_like This family is most closely related | 99.78 | |
| TIGR02461 | 225 | osmo_MPG_phos mannosyl-3-phosphoglycerate phosphat | 99.78 | |
| PRK09922 | 359 | UDP-D-galactose:(glucosyl)lipopolysaccharide-1,6-D | 99.77 | |
| cd03823 | 359 | GT1_ExpE7_like This family is most closely related | 99.77 | |
| PRK12702 | 302 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 99.77 | |
| PLN02846 | 462 | digalactosyldiacylglycerol synthase | 99.77 | |
| cd03808 | 359 | GT1_cap1E_like This family is most closely related | 99.76 | |
| PF05116 | 247 | S6PP: Sucrose-6F-phosphate phosphohydrolase; Inter | 99.75 | |
| cd03816 | 415 | GT1_ALG1_like This family is most closely related | 99.75 | |
| PLN02501 | 794 | digalactosyldiacylglycerol synthase | 99.75 | |
| cd03795 | 357 | GT1_like_4 This family is most closely related to | 99.74 | |
| TIGR03087 | 397 | stp1 sugar transferase, PEP-CTERM/EpsH1 system ass | 99.73 | |
| cd03811 | 353 | GT1_WabH_like This family is most closely related | 99.72 | |
| PHA01630 | 331 | putative group 1 glycosyl transferase | 99.71 | |
| cd03804 | 351 | GT1_wbaZ_like This family is most closely related | 99.71 | |
| cd04955 | 363 | GT1_like_6 This family is most closely related to | 99.71 | |
| cd03802 | 335 | GT1_AviGT4_like This family is most closely relate | 99.7 | |
| cd03825 | 365 | GT1_wcfI_like This family is most closely related | 99.68 | |
| PRK05749 | 425 | 3-deoxy-D-manno-octulosonic-acid transferase; Revi | 99.67 | |
| PLN02275 | 371 | transferase, transferring glycosyl groups | 99.66 | |
| COG0297 | 487 | GlgA Glycogen synthase [Carbohydrate transport and | 99.63 | |
| PF00534 | 172 | Glycos_transf_1: Glycosyl transferases group 1; In | 99.61 | |
| cd04950 | 373 | GT1_like_1 Glycosyltransferases catalyze the trans | 99.53 | |
| COG3769 | 274 | Predicted hydrolase (HAD superfamily) [General fun | 99.52 | |
| KOG1111 | 426 | consensus N-acetylglucosaminyltransferase complex, | 99.49 | |
| PLN02605 | 382 | monogalactosyldiacylglycerol synthase | 99.43 | |
| KOG0853 | 495 | consensus Glycosyltransferase [Cell wall/membrane/ | 99.27 | |
| cd01635 | 229 | Glycosyltransferase_GTB_type Glycosyltransferases | 99.23 | |
| COG0438 | 381 | RfaG Glycosyltransferase [Cell envelope biogenesis | 99.2 | |
| PRK13609 | 380 | diacylglycerol glucosyltransferase; Provisional | 99.2 | |
| PRK00726 | 357 | murG undecaprenyldiphospho-muramoylpentapeptide be | 99.19 | |
| cd03785 | 350 | GT1_MurG MurG is an N-acetylglucosaminyltransferas | 99.18 | |
| TIGR00236 | 365 | wecB UDP-N-acetylglucosamine 2-epimerase. Epimeras | 99.15 | |
| TIGR01133 | 348 | murG undecaprenyldiphospho-muramoylpentapeptide be | 99.1 | |
| PRK13608 | 391 | diacylglycerol glucosyltransferase; Provisional | 99.1 | |
| cd03786 | 363 | GT1_UDP-GlcNAc_2-Epimerase Bacterial members of th | 99.08 | |
| TIGR01670 | 154 | YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-pho | 99.03 | |
| PRK09484 | 183 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphata | 98.97 | |
| PF13692 | 135 | Glyco_trans_1_4: Glycosyl transferases group 1; PD | 98.86 | |
| TIGR02094 | 601 | more_P_ylases alpha-glucan phosphorylases. This fa | 98.86 | |
| PRK00025 | 380 | lpxB lipid-A-disaccharide synthase; Reviewed | 98.83 | |
| KOG3189 | 252 | consensus Phosphomannomutase [Lipid transport and | 98.81 | |
| PF03332 | 220 | PMM: Eukaryotic phosphomannomutase; InterPro: IPR0 | 98.81 | |
| KOG1387 | 465 | consensus Glycosyltransferase [Cell wall/membrane/ | 98.8 | |
| TIGR02726 | 169 | phenyl_P_delta phenylphosphate carboxylase, delta | 98.79 | |
| cd01427 | 139 | HAD_like Haloacid dehalogenase-like hydrolases. Th | 98.76 | |
| TIGR03713 | 519 | acc_sec_asp1 accessory Sec system protein Asp1. Th | 98.74 | |
| PRK09814 | 333 | beta-1,6-galactofuranosyltransferase; Provisional | 98.74 | |
| PRK11133 | 322 | serB phosphoserine phosphatase; Provisional | 98.73 | |
| COG1778 | 170 | Low specificity phosphatase (HAD superfamily) [Gen | 98.66 | |
| COG0546 | 220 | Gph Predicted phosphatases [General function predi | 98.56 | |
| PRK13226 | 229 | phosphoglycolate phosphatase; Provisional | 98.47 | |
| TIGR01458 | 257 | HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydr | 98.44 | |
| PRK10444 | 248 | UMP phosphatase; Provisional | 98.44 | |
| cd04299 | 778 | GT1_Glycogen_Phosphorylase_like This family is mos | 98.44 | |
| PRK13288 | 214 | pyrophosphatase PpaX; Provisional | 98.41 | |
| PF05693 | 633 | Glycogen_syn: Glycogen synthase; InterPro: IPR0086 | 98.41 | |
| smart00775 | 157 | LNS2 LNS2 domain. This domain is found in Saccharo | 98.4 | |
| PRK13225 | 273 | phosphoglycolate phosphatase; Provisional | 98.33 | |
| COG0560 | 212 | SerB Phosphoserine phosphatase [Amino acid transpo | 98.32 | |
| TIGR00215 | 385 | lpxB lipid-A-disaccharide synthase. Lipid-A precur | 98.31 | |
| TIGR01457 | 249 | HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydr | 98.31 | |
| PRK13222 | 226 | phosphoglycolate phosphatase; Provisional | 98.3 | |
| PLN02645 | 311 | phosphoglycolate phosphatase | 98.29 | |
| PRK13223 | 272 | phosphoglycolate phosphatase; Provisional | 98.29 | |
| TIGR00338 | 219 | serB phosphoserine phosphatase SerB. Phosphoserine | 98.28 | |
| TIGR01452 | 279 | PGP_euk phosphoglycolate/pyridoxal phosphate phosp | 98.27 | |
| TIGR01491 | 201 | HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPa | 98.21 | |
| TIGR01449 | 213 | PGP_bact 2-phosphoglycolate phosphatase, prokaryot | 98.2 | |
| COG1519 | 419 | KdtA 3-deoxy-D-manno-octulosonic-acid transferase | 98.18 | |
| TIGR01488 | 177 | HAD-SF-IB Haloacid Dehalogenase superfamily, subfa | 98.17 | |
| PRK13478 | 267 | phosphonoacetaldehyde hydrolase; Provisional | 98.14 | |
| PLN02770 | 248 | haloacid dehalogenase-like hydrolase family protei | 98.1 | |
| PLN02954 | 224 | phosphoserine phosphatase | 98.09 | |
| TIGR01689 | 126 | EcbF-BcbF capsule biosynthesis phosphatase. Due to | 98.04 | |
| PF13524 | 92 | Glyco_trans_1_2: Glycosyl transferases group 1 | 98.0 | |
| PRK06769 | 173 | hypothetical protein; Validated | 97.99 | |
| TIGR01422 | 253 | phosphonatase phosphonoacetaldehyde hydrolase. Thi | 97.98 | |
| PRK10826 | 222 | 2-deoxyglucose-6-phosphatase; Provisional | 97.95 | |
| PRK08942 | 181 | D,D-heptose 1,7-bisphosphate phosphatase; Validate | 97.95 | |
| TIGR03351 | 220 | PhnX-like phosphonatase-like hydrolase. This clade | 97.95 | |
| TIGR02919 | 438 | accessory Sec system glycosyltransferase GtfB. Mem | 97.91 | |
| PLN02575 | 381 | haloacid dehalogenase-like hydrolase | 97.9 | |
| PLN03243 | 260 | haloacid dehalogenase-like hydrolase; Provisional | 97.89 | |
| PRK11587 | 218 | putative phosphatase; Provisional | 97.89 | |
| TIGR01454 | 205 | AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthes | 97.88 | |
| PLN02779 | 286 | haloacid dehalogenase-like hydrolase family protei | 97.86 | |
| PRK09552 | 219 | mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosp | 97.84 | |
| TIGR01684 | 301 | viral_ppase viral phosphatase. These proteins also | 97.81 | |
| TIGR02253 | 221 | CTE7 HAD superfamily (subfamily IA) hydrolase, TIG | 97.78 | |
| TIGR01681 | 128 | HAD-SF-IIIC HAD-superfamily phosphatase, subfamily | 97.69 | |
| TIGR00213 | 176 | GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase | 97.55 | |
| PRK06698 | 459 | bifunctional 5'-methylthioadenosine/S-adenosylhomo | 97.52 | |
| PRK09449 | 224 | dUMP phosphatase; Provisional | 97.48 | |
| PLN02940 | 382 | riboflavin kinase | 97.48 | |
| PRK14988 | 224 | GMP/IMP nucleotidase; Provisional | 97.47 | |
| TIGR01656 | 147 | Histidinol-ppas histidinol-phosphate phosphatase f | 97.47 | |
| PHA02597 | 197 | 30.2 hypothetical protein; Provisional | 97.45 | |
| PHA03398 | 303 | viral phosphatase superfamily protein; Provisional | 97.4 | |
| TIGR01261 | 161 | hisB_Nterm histidinol-phosphatase. This model desc | 97.33 | |
| PHA02530 | 300 | pseT polynucleotide kinase; Provisional | 97.31 | |
| TIGR01668 | 170 | YqeG_hyp_ppase HAD superfamily (subfamily IIIA) ph | 97.26 | |
| TIGR01990 | 185 | bPGM beta-phosphoglucomutase. The enzyme from L. l | 97.18 | |
| TIGR01664 | 166 | DNA-3'-Pase DNA 3'-phosphatase. The central phosph | 97.13 | |
| TIGR03333 | 214 | salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl | 97.13 | |
| COG0647 | 269 | NagD Predicted sugar phosphatases of the HAD super | 97.13 | |
| TIGR01489 | 188 | DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopent | 97.12 | |
| TIGR01525 | 556 | ATPase-IB_hvy heavy metal translocating P-type ATP | 97.07 | |
| PRK10671 | 834 | copA copper exporting ATPase; Provisional | 97.01 | |
| PRK10725 | 188 | fructose-1-P/6-phosphogluconate phosphatase; Provi | 97.01 | |
| TIGR01549 | 154 | HAD-SF-IA-v1 haloacid dehalogenase superfamily, su | 96.93 | |
| PRK11590 | 211 | hypothetical protein; Provisional | 96.92 | |
| TIGR02009 | 185 | PGMB-YQAB-SF beta-phosphoglucomutase family hydrol | 96.9 | |
| TIGR01686 | 320 | FkbH FkbH-like domain. The C-terminal portion of t | 96.86 | |
| TIGR01460 | 236 | HAD-SF-IIA Haloacid Dehalogenase Superfamily Class | 96.86 | |
| TIGR01672 | 237 | AphA HAD superfamily (subfamily IIIB) phosphatase, | 96.85 | |
| PRK10563 | 221 | 6-phosphogluconate phosphatase; Provisional | 96.84 | |
| TIGR01512 | 536 | ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translo | 96.84 | |
| TIGR01459 | 242 | HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolas | 96.83 | |
| PF06888 | 234 | Put_Phosphatase: Putative Phosphatase; InterPro: I | 96.81 | |
| TIGR01497 | 675 | kdpB K+-transporting ATPase, B subunit. One sequen | 96.8 | |
| TIGR02254 | 224 | YjjG/YfnB HAD superfamily (subfamily IA) hydrolase | 96.8 | |
| TIGR01662 | 132 | HAD-SF-IIIA HAD-superfamily hydrolase, subfamily I | 96.8 | |
| PF06437 | 408 | ISN1: IMP-specific 5'-nucleotidase; InterPro: IPR0 | 96.77 | |
| PLN02919 | 1057 | haloacid dehalogenase-like hydrolase family protei | 96.72 | |
| TIGR01511 | 562 | ATPase-IB1_Cu copper-(or silver)-translocating P-t | 96.55 | |
| TIGR02252 | 203 | DREG-2 REG-2-like, HAD superfamily (subfamily IA) | 96.48 | |
| TIGR01522 | 884 | ATPase-IIA2_Ca golgi membrane calcium-translocatin | 96.42 | |
| PRK08238 | 479 | hypothetical protein; Validated | 96.4 | |
| TIGR01548 | 197 | HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, | 96.35 | |
| PF00702 | 215 | Hydrolase: haloacid dehalogenase-like hydrolase; I | 96.35 | |
| PRK05446 | 354 | imidazole glycerol-phosphate dehydratase/histidino | 96.34 | |
| PRK11033 | 741 | zntA zinc/cadmium/mercury/lead-transporting ATPase | 96.27 | |
| TIGR01428 | 198 | HAD_type_II 2-haloalkanoic acid dehalogenase, type | 96.21 | |
| TIGR02247 | 211 | HAD-1A3-hyp Epoxide hydrolase N-terminal domain-li | 96.15 | |
| TIGR01456 | 321 | CECR5 HAD-superfamily class IIA hydrolase, TIGR014 | 96.14 | |
| PF13344 | 101 | Hydrolase_6: Haloacid dehalogenase-like hydrolase; | 96.14 | |
| COG1011 | 229 | Predicted hydrolase (HAD superfamily) [General fun | 96.08 | |
| COG0637 | 221 | Predicted phosphatase/phosphohexomutase [General f | 96.0 | |
| KOG2941 | 444 | consensus Beta-1,4-mannosyltransferase [Posttransl | 95.94 | |
| TIGR01106 | 997 | ATPase-IIC_X-K sodium or proton efflux -- potassiu | 95.9 | |
| PRK01122 | 679 | potassium-transporting ATPase subunit B; Provision | 95.83 | |
| COG2179 | 175 | Predicted hydrolase of the HAD superfamily [Genera | 95.77 | |
| TIGR01993 | 184 | Pyr-5-nucltdase pyrimidine 5'-nucleotidase. These | 95.74 | |
| TIGR01116 | 917 | ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium | 95.72 | |
| PRK14010 | 673 | potassium-transporting ATPase subunit B; Provision | 95.72 | |
| TIGR01517 | 941 | ATPase-IIB_Ca plasma-membrane calcium-translocatin | 95.68 | |
| KOG3120 | 256 | consensus Predicted haloacid dehalogenase-like hyd | 95.61 | |
| PTZ00445 | 219 | p36-lilke protein; Provisional | 95.46 | |
| PF12710 | 192 | HAD: haloacid dehalogenase-like hydrolase; PDB: 3P | 95.34 | |
| PRK11009 | 237 | aphA acid phosphatase/phosphotransferase; Provisio | 95.33 | |
| TIGR01675 | 229 | plant-AP plant acid phosphatase. This model explic | 95.12 | |
| COG4087 | 152 | Soluble P-type ATPase [General function prediction | 95.11 | |
| TIGR01657 | 1054 | P-ATPase-V P-type ATPase of unknown pump specifici | 95.05 | |
| PRK10517 | 902 | magnesium-transporting ATPase MgtA; Provisional | 95.04 | |
| PF13242 | 75 | Hydrolase_like: HAD-hyrolase-like; PDB: 2P27_A 2OY | 95.02 | |
| TIGR01652 | 1057 | ATPase-Plipid phospholipid-translocating P-type AT | 94.99 | |
| KOG1615 | 227 | consensus Phosphoserine phosphatase [Amino acid tr | 94.99 | |
| PRK15122 | 903 | magnesium-transporting ATPase; Provisional | 94.93 | |
| PF08323 | 245 | Glyco_transf_5: Starch synthase catalytic domain; | 94.89 | |
| TIGR01647 | 755 | ATPase-IIIA_H plasma-membrane proton-efflux P-type | 94.75 | |
| TIGR01524 | 867 | ATPase-IIIB_Mg magnesium-translocating P-type ATPa | 94.74 | |
| COG0763 | 381 | LpxB Lipid A disaccharide synthetase [Cell envelop | 94.48 | |
| PF09419 | 168 | PGP_phosphatase: Mitochondrial PGP phosphatase; In | 94.46 | |
| TIGR01523 | 1053 | ATPase-IID_K-Na potassium and/or sodium efflux P-t | 94.42 | |
| PRK13582 | 205 | thrH phosphoserine phosphatase; Provisional | 94.29 | |
| PF08645 | 159 | PNK3P: Polynucleotide kinase 3 phosphatase; InterP | 94.17 | |
| TIGR01490 | 202 | HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrol | 94.16 | |
| TIGR02137 | 203 | HSK-PSP phosphoserine phosphatase/homoserine phosp | 94.15 | |
| TIGR01494 | 499 | ATPase_P-type ATPase, P-type (transporting), HAD s | 94.04 | |
| PF02684 | 373 | LpxB: Lipid-A-disaccharide synthetase; InterPro: I | 94.02 | |
| TIGR01533 | 266 | lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) famil | 94.01 | |
| PF13439 | 177 | Glyco_transf_4: Glycosyltransferase Family 4; PDB: | 93.96 | |
| COG0474 | 917 | MgtA Cation transport ATPase [Inorganic ion transp | 93.68 | |
| TIGR01685 | 174 | MDP-1 magnesium-dependent phosphatase-1. This mode | 93.58 | |
| PLN03190 | 1178 | aminophospholipid translocase; Provisional | 93.55 | |
| TIGR01680 | 275 | Veg_Stor_Prot vegetative storage protein. The prot | 93.48 | |
| TIGR03492 | 396 | conserved hypothetical protein. This protein famil | 93.38 | |
| PF08235 | 157 | LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 | 93.07 | |
| KOG0210 | 1051 | consensus P-type ATPase [Inorganic ion transport a | 93.03 | |
| TIGR03568 | 365 | NeuC_NnaA UDP-N-acetyl-D-glucosamine 2-epimerase, | 92.66 | |
| PF03767 | 229 | Acid_phosphat_B: HAD superfamily, subfamily IIIB ( | 92.18 | |
| KOG3040 | 262 | consensus Predicted sugar phosphatase (HAD superfa | 92.17 | |
| PF02350 | 346 | Epimerase_2: UDP-N-acetylglucosamine 2-epimerase; | 92.17 | |
| PF13844 | 468 | Glyco_transf_41: Glycosyl transferase family 41; P | 92.05 | |
| PF11019 | 252 | DUF2608: Protein of unknown function (DUF2608); In | 91.79 | |
| TIGR01663 | 526 | PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase | 91.36 | |
| smart00577 | 148 | CPDc catalytic domain of ctd-like phosphatases. | 90.56 | |
| cd03784 | 401 | GT1_Gtf_like This family includes the Gtfs, a grou | 89.9 | |
| PRK13582 | 205 | thrH phosphoserine phosphatase; Provisional | 88.41 | |
| COG3882 | 574 | FkbH Predicted enzyme involved in methoxymalonyl-A | 87.96 | |
| PF12689 | 169 | Acid_PPase: Acid Phosphatase; InterPro: IPR010036 | 87.93 | |
| TIGR01545 | 210 | YfhB_g-proteo haloacid dehalogenase superfamily, s | 87.9 | |
| PF05152 | 297 | DUF705: Protein of unknown function (DUF705); Inte | 87.29 | |
| COG0241 | 181 | HisB Histidinol phosphatase and related phosphatas | 87.23 | |
| COG0381 | 383 | WecB UDP-N-acetylglucosamine 2-epimerase [Cell env | 87.04 | |
| COG0707 | 357 | MurG UDP-N-acetylglucosamine:LPS N-acetylglucosami | 86.79 | |
| TIGR01426 | 392 | MGT glycosyltransferase, MGT family. This model de | 85.96 | |
| PF03031 | 159 | NIF: NLI interacting factor-like phosphatase; Inte | 85.54 | |
| TIGR01490 | 202 | HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrol | 85.22 | |
| KOG0208 | 1140 | consensus Cation transport ATPase [Inorganic ion t | 84.91 | |
| COG4030 | 315 | Uncharacterized protein conserved in archaea [Func | 84.81 | |
| COG2217 | 713 | ZntA Cation transport ATPase [Inorganic ion transp | 84.66 | |
| PF13579 | 160 | Glyco_trans_4_4: Glycosyl transferase 4-like domai | 84.49 | |
| KOG0202 | 972 | consensus Ca2+ transporting ATPase [Inorganic ion | 84.27 | |
| PF07429 | 360 | Glyco_transf_56: 4-alpha-L-fucosyltransferase glyc | 84.21 | |
| TIGR02245 | 195 | HAD_IIID1 HAD-superfamily subfamily IIID hydrolase | 83.47 | |
| KOG0206 | 1151 | consensus P-type ATPase [General function predicti | 83.4 | |
| PRK10748 | 238 | flavin mononucleotide phosphatase; Provisional | 82.86 | |
| TIGR03590 | 279 | PseG pseudaminic acid biosynthesis-associated prot | 82.82 | |
| TIGR02137 | 203 | HSK-PSP phosphoserine phosphatase/homoserine phosp | 82.25 | |
| PF06941 | 191 | NT5C: 5' nucleotidase, deoxy (Pyrimidine), cytosol | 81.38 | |
| TIGR02251 | 162 | HIF-SF_euk Dullard-like phosphatase domain. This d | 81.09 | |
| KOG3109 | 244 | consensus Haloacid dehalogenase-like hydrolase [Ge | 80.74 | |
| PRK10748 | 238 | flavin mononucleotide phosphatase; Provisional | 80.57 | |
| PLN02811 | 220 | hydrolase | 80.47 |
| >PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-191 Score=1710.62 Aligned_cols=843 Identities=70% Similarity=1.209 Sum_probs=795.7
Q ss_pred CccccccchhhhccCCCCCCCCcccccccccccccccccccccccccCCCCCCCC-CCCCCCeEEEEEcCCccceeecCC
Q 003025 1 MMSKSYTNLLDLASGNFPAMGPSREKKRLPRVMTVPGVISELDDDQANSVSSDVP-SSVAQDRVIIVANQLPVKAKRRPD 79 (856)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~iivsnrlP~~~~~~~~ 79 (856)
|+||||+|||||++|++..++ ++.+++|++|++||+++++++++.++.+++.+ +..+.+|+||||||||+.++++++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rliiVsnrlPv~~~~~~~ 78 (854)
T PLN02205 1 MVSRSYSNLLELASGESPSFG--RMNRRIPRIMTVAGIMSDIDDDPSESVCSDPSSSSVPKDRIIIVANQLPIRAQRKSD 78 (854)
T ss_pred CcChhhccHHHhccCCccccc--ccccCCCceecCCCcccccccccccccccccccCCCCCCcEEEEEccCceEEEEcCC
Confidence 899999999999999999999 88999999999999999999988877777666 566778999999999999998755
Q ss_pred C-CCeEEEecCCchHHhhhccCCC-CCceEEEEccCCCCCcchhhhHHHhhccCeeEEEeeCChhhhhhHhhcccccccc
Q 003025 80 N-KGWSFSWDEDSLLLQLKDGLPE-DMEVIYVGSLKVDVDLSEQDDVSQLLLDRFKCVPAFLPPDILTKFYHGFCKQHLW 157 (856)
Q Consensus 80 ~-~~~~~~~~~~~l~~~l~~~~~~-~~~~~wvg~~~~~~~~~~~~~~~~~~~~~~~~~pv~l~~~~~~~~y~gf~~~~lW 157 (856)
+ ++|+|+|++|||+++|++++.. ..+++||||++.++++++|+++.+.++++|+|+||||+++++++||+||||++||
T Consensus 79 g~~~~~~~~~~ggL~~~l~~~~~~~~~~~~wvG~~~~~~~~~~~~~~~~~l~~~~~~~pv~l~~~~~~~~Y~gf~n~~LW 158 (854)
T PLN02205 79 GSKGWIFSWDENSLLLQLKDGLGDDEIEVIYVGCLKEEIHLNEQEEVSQILLETFKCVPTFLPPDLFTRYYHGFCKQQLW 158 (854)
T ss_pred CCcceEEEeCCCchHHHHhhhhhcccCceEEEEecCCCCCchhhhhHHHHHhcCceEEEeeCCHHHHHHHHHhhhhcccc
Confidence 4 7899999999999999988864 3789999999998888889888888888999999999999999999999999999
Q ss_pred ccccccCCCCCCCCCCcChHhHHHHHHHHHHHHHHHHHHcCCCCCEEEEeCcccchHHHHHHhhcCCCeEEEEEccCCCC
Q 003025 158 PLFHYMLPFSATHGGRFDRSLWEAYVSANKIFSQRVIEVINPEDDYVWIHDYHLMVLPTFLRRRFTRLRMGFFLHSPFPS 237 (856)
Q Consensus 158 pl~H~~~~~~~~~~~~~~~~~w~~Y~~vN~~fa~~i~~~~~~~~D~VwihDyhl~llp~~lr~~~~~~~i~~flH~PfP~ 237 (856)
|+|||+++..|+++.+|+++.|++|++||++||++|++.++|++|+|||||||||+||+|||+++|+++||||||||||+
T Consensus 159 PlfH~~~~~~~~~~~~f~~~~w~~Y~~vN~~FA~~v~~~~~~~~d~VWVhDYhL~llP~~LR~~~~~~~IgfFlHiPFPs 238 (854)
T PLN02205 159 PLFHYMLPLSPDLGGRFNRSLWQAYVSVNKIFADRIMEVINPEDDFVWIHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPS 238 (854)
T ss_pred chhccCCCCCccccccccHHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEeCchhhHHHHHHHhhCCCCcEEEEecCCCCC
Confidence 99999988888777799999999999999999999999999867999999999999999999999999999999999999
Q ss_pred hHHHhcCCchHHHHHHhHhCCEEcccCHHHHHHHHHHHHhhhCceecccCceeeEEECCEEEEEEEeecccCchHHHHHh
Q 003025 238 SEIYRTLPVREEILKALLNADLIGFHTFDYARHFLSCCSRMLGLEYQSKRGYIGLEYYGRTVGIKIMPVGIHMGQIESVL 317 (856)
Q Consensus 238 ~e~~~~lp~r~eil~~ll~~dligf~t~~~~~~Fl~~~~r~lg~~~~~~~~~~~~~~~gr~~~i~i~p~GId~~~~~~~~ 317 (856)
+|+||+||||+|||+|||+||+|||||++|+|||++||+|+||+++..++|+++++|+||+++|+++|+|||++.|...+
T Consensus 239 ~eifr~LP~r~eiL~glL~aDlIGFht~~yar~Fl~~~~r~lgl~~~~~~g~~~~~~~Gr~v~v~~~PigId~~~~~~~~ 318 (854)
T PLN02205 239 SEIYKTLPIREELLRALLNSDLIGFHTFDYARHFLSCCSRMLGLSYESKRGYIGLEYYGRTVSIKILPVGIHMGQLQSVL 318 (854)
T ss_pred hHHHhhCCcHHHHHHHHhcCCeEEecCHHHHHHHHHHHHHHhCCcccCCCcceeEEECCcEEEEEEEeCeEcHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999888889999999999999999999999999999
Q ss_pred cCchHHHHHHHHHHHcC--CCeEEEeccCccccCCHHHHHHHHHHHHHhCCCCcCceEEEEEecCCCCCchhHHHHHHHH
Q 003025 318 RLADKDWRVQELKQQFE--GKTVLLGVDDMDIFKGVDLKLLAMEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEI 395 (856)
Q Consensus 318 ~~~~~~~~~~~l~~~~~--~k~iil~VdRld~~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~~ 395 (856)
..+++..++++++++++ |+++|+||||||++|||.+||+|||+||++||+|+||++||||++|+|+++++|+++++++
T Consensus 319 ~~~~~~~~~~~l~~~~~~~~~~~ilgVDrlD~~KGi~~kl~A~e~~L~~~P~~~gkvvlvQia~psr~~~~~y~~~~~ev 398 (854)
T PLN02205 319 SLPETEAKVKELIKQFCDQDRIMLLGVDDMDIFKGISLKLLAMEQLLMQHPEWQGKVVLVQIANPARGKGKDVKEVQAET 398 (854)
T ss_pred cChhHHHHHHHHHHHhccCCCEEEEEccCcccccCHHHHHHHHHHHHHhCccccCCEEEEEEecCCCcccHHHHHHHHHH
Confidence 99999999999999995 7999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhcccCCCCcccEEEEcCCCCHHHHHHHHHhcceeeeccccccCCCcccceeeeecCCCCCCCCCCCCC--CCC
Q 003025 396 HATCKRINETFGRPGYEPVVFIDKPVTLSERAAYYTIAECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSA--PKK 473 (856)
Q Consensus 396 ~~lv~~IN~~~~~~~~~pvv~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~--~~~ 473 (856)
+++|+|||++||+.+|+||+|+.+.++++|+.|||++||||++||+|||||||++||+|||++++.++++++..+ +++
T Consensus 399 ~~~v~rIN~~fg~~~~~Pv~~~~~~~~~~e~~aly~~ADv~lVT~lRDGMNLva~Eyia~~~~~~~~~~~~~~~~~~~~~ 478 (854)
T PLN02205 399 HSTVKRINETFGKPGYDPIVLIDAPLKFYERVAYYVVAECCLVTAVRDGMNLIPYEYIISRQGNEKLDKLLGLEPSTPKK 478 (854)
T ss_pred HHHHHHHHhhcCCCCCceEEEEecCCCHHHHHHHHHhccEEEeccccccccccchheeEEccCccccccccccccccCCC
Confidence 999999999999999999999999999999999999999999999999999999999999998877777666554 479
Q ss_pred ceEEecCCcccccccCCceeeCCCCHHHHHHHHHHHHcCCHHHHHHHHHHHhhhhhcCCHHHHHHHHHHHHHHHHHhhcc
Q 003025 474 SMLVVSEFIGCSPSLSGAIRVNPWNIEATAEAMHEAIQMNEAEKQLRHEKHYRYVSTHDVAYWARSFFQDMERTCKDHFK 553 (856)
Q Consensus 474 g~lV~Se~~G~~~~l~~al~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~l~~~~~~~~~ 553 (856)
|+||+|||+||+++|++|++|||||++++|+||++||+|+++||+.||++++++|++||+.+|+++|+++|+++|+++++
T Consensus 479 gvLiLSEfaGaa~~L~~Ai~VNP~d~~~~a~ai~~AL~m~~~Er~~R~~~~~~~v~~~d~~~W~~~fl~~l~~~~~~~~~ 558 (854)
T PLN02205 479 SMLVVSEFIGCSPSLSGAIRVNPWNIDAVADAMDSALEMAEPEKQLRHEKHYRYVSTHDVGYWARSFLQDLERTCRDHSR 558 (854)
T ss_pred CceEeeeccchhHHhCcCeEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999888
Q ss_pred ccccccCcccceeEeecCcccccCCHHHHHHHHHcCCcEEEEEecCCCCCCCCCCCCCCCHHHHHHHHHHHhhCCCeEEE
Q 003025 554 RRCWGIGLSFGFRVVALDPNFRKLSIDAIVSAYLRSKSRAILFDYDGTVMPQTSINKAPSQAVISIINTLCNDARNTVFV 633 (856)
Q Consensus 554 ~~~~~~g~g~~~~~~~~~~~f~~l~~~~i~~~y~~s~~rlI~~DlDGTLl~~~~~~~~~s~~~~~aL~~L~~d~g~~V~I 633 (856)
++||++|||++||+++++|+|++|+++.++++|+++++|+|++||||||++..+....|+++++++|++||.++|+.|+|
T Consensus 559 ~~~~~~g~g~~~~~~~~~~~~~~l~~~~i~~~y~~~~~rlI~LDyDGTLlp~~~~~~~p~~~~~~~L~~L~~d~g~~VaI 638 (854)
T PLN02205 559 RRCWGIGFGLSFRVVALDPNFRKLSMEHIVSAYKRTTTRAILLDYDGTLMPQASIDKSPSSKSIDILNTLCRDKNNMVFI 638 (854)
T ss_pred hhhcccccccccccccccccccccCHHHHHHHHHhhcCeEEEEecCCcccCCccccCCCCHHHHHHHHHHHhcCCCEEEE
Confidence 99999999999999999999999999999999999999999999999999855445689999999999999999999999
Q ss_pred ecCCChhhHHHhhcCCCCccEEeeCCEEEEeCCCcceEecCCCCcccHHHHHHHHHHHHhhcCCcceEEecccceEEeee
Q 003025 634 VSGRGRDCLGKWFSPCKKLGIAAEHGYFMRWSADEEWQNCGQSVDFGWIQIAEPVMKLYTESTDGSYIEIKESALVWHHR 713 (856)
Q Consensus 634 ~TGR~~~~l~~~~~~~~~lgliaenG~~I~~~~~~~w~~~~~~~~~~w~~~v~~i~~~~~~~~~Gs~ie~k~~~l~~~~~ 713 (856)
+|||++..+++||+.+++++++|+||++++++++..|+......+..|++.+..+++.|++++||+++|.|+++++|||+
T Consensus 639 vSGR~~~~L~~~f~~~~~l~laaEHG~~ir~~~~~~w~~~~~~~~~~w~~~v~~i~~~y~ertpGs~IE~K~~slv~HyR 718 (854)
T PLN02205 639 VSARSRKTLADWFSPCEKLGIAAEHGYFLRLKRDVEWETCVPVADCSWKQIAEPVMQLYTETTDGSTIEDKETALVWCYE 718 (854)
T ss_pred EeCCCHHHHHHHhCCCCCeEEEEeCCEEEEeCCCceeeecchhhhHHHHHHHHHHHHHHhcCCCchhheecceEEEEehh
Confidence 99999999999999887899999999999998888897665445678999999999999999999999999999999999
Q ss_pred cCCCCCCchhHHHHHHHHHHHhcCCCeEEEEcCeEEEEEeCCCCHHHHHHHHHHHhhhcCCCcceEEEEeCCchhHHHHH
Q 003025 714 DADPGFGSSQAKELLDHLESVLANEPAAVKSGQFIVEVKPQGVSKGVVAEKIFTTMAESGRHADFVLCIGDDRSDEDMFE 793 (856)
Q Consensus 714 ~~dp~~~~~~a~el~~~L~~~l~~~~~~v~~g~~~vEI~p~gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~ 793 (856)
++||+++.++++++.++++..+.+.++.+.+|+.++||+|+++|||.|++.+++++...|+++|+++||||+.||++||+
T Consensus 719 ~adpd~~~~qa~el~~~l~~~l~~~~~~v~~G~~vvEV~p~gvnKG~Al~~Ll~~~~~~g~~~d~vl~~GDD~nDedMF~ 798 (854)
T PLN02205 719 DADPDFGSCQAKELLDHLESVLANEPVTVKSGQNIVEVKPQGVSKGLVAKRLLSIMQERGMLPDFVLCIGDDRSDEDMFE 798 (854)
T ss_pred hCChHHhhhhhHHHHHHHHHHHhcCceEEEECCcEEEEEeCCCCHHHHHHHHHHHHHhcCCCcccEEEEcCCccHHHHHH
Confidence 99999999999999999999988888899999999999999999999999998765444889999999999999999999
Q ss_pred HccccccCCCCCCCccEEEEEeCCCccccceEcCChhHHHHHHHHHHHhcCC
Q 003025 794 IIGNATSSGVLSSNASVFACTVGQKPSKAKYYLDDAAEVVTMLEALAEASAP 845 (856)
Q Consensus 794 ~ag~~~~~~~~~~~~~~~av~vG~~~s~A~y~l~~~~eV~~~L~~L~~~~~~ 845 (856)
.++....+..++..++.|+|+||.++|+|+|+|+++++|.++|+.|++.+.+
T Consensus 799 ~~~~~~~g~~~~~~~~~~~v~VG~~~S~A~y~L~d~~eV~~lL~~L~~~~~~ 850 (854)
T PLN02205 799 VITSSMAGPSIAPRAEVFACTVGQKPSKAKYYLDDTAEIVRLMQGLASVSEQ 850 (854)
T ss_pred HhhhhccCCcccccccceeEEECCCCccCeEecCCHHHHHHHHHHHHhcchh
Confidence 9985444556777788899999999999999999999999999999987654
|
|
| >PLN03064 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-159 Score=1419.69 Aligned_cols=747 Identities=36% Similarity=0.689 Sum_probs=671.4
Q ss_pred CCeEEEEEcCCccceeecCCCCCeEEEecCCchHHhhhccCCCCCceEEEEccCCCCCcc-hhhhHHHhhccCeeEEEee
Q 003025 60 QDRVIIVANQLPVKAKRRPDNKGWSFSWDEDSLLLQLKDGLPEDMEVIYVGSLKVDVDLS-EQDDVSQLLLDRFKCVPAF 138 (856)
Q Consensus 60 ~~~~iivsnrlP~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~wvg~~~~~~~~~-~~~~~~~~~~~~~~~~pv~ 138 (856)
++|+||||||||+.++++++ |.|.++++.|||+++|.+ + +..+++||||+|..++.+ +++.+... +.+|+|+|||
T Consensus 93 ~~rlIiVSNRlPv~~~~~~~-g~~~~~~s~GGLvsaL~~-~-~~~~~~WVGw~g~~~~~~~~~~~~~~~-l~~~~~~pV~ 168 (934)
T PLN03064 93 RQRLLVVANRLPVSAVRRGE-DSWSLEISAGGLVSALLG-V-KEFEARWIGWAGVNVPDEVGQKALTKA-LAEKRCIPVF 168 (934)
T ss_pred CCCEEEEECCCCcceeecCC-CceEEeECCCCcHHHhcc-c-ccCCeEEEeeCCCCCCCcchhHHHHHH-hccCceEEEe
Confidence 68999999999999988654 789999999999999975 5 568999999999877653 45555444 5789999999
Q ss_pred CChhhhhhHhhccccccccccccccC-CCCCC-CCCCcChHhHHHHHHHHHHHHHHHHHHcCCCCCEEEEeCcccchHHH
Q 003025 139 LPPDILTKFYHGFCKQHLWPLFHYML-PFSAT-HGGRFDRSLWEAYVSANKIFSQRVIEVINPEDDYVWIHDYHLMVLPT 216 (856)
Q Consensus 139 l~~~~~~~~y~gf~~~~lWpl~H~~~-~~~~~-~~~~~~~~~w~~Y~~vN~~fa~~i~~~~~~~~D~VwihDyhl~llp~ 216 (856)
|+++++++||+||||++|||+|||+. +..+. ...+|+++.|++|++||++||++|++.++|+ |+|||||||||+||.
T Consensus 169 l~~~~~~~~Y~gfcn~~LWPlfHy~~~~~~~~~~~~~~~~~~w~~Y~~vN~~FA~~i~~~~~~g-D~VWVHDYHL~LlP~ 247 (934)
T PLN03064 169 LDEEIVHQYYNGYCNNILWPLFHYLGLPQEDRLATTRSFQSQFAAYKKANQMFADVVNEHYEEG-DVVWCHDYHLMFLPK 247 (934)
T ss_pred CCHHHHHHHHHHhhhcccchhhcCcCCCcccccccccccHHHHHHHHHHHHHHHHHHHHhcCCC-CEEEEecchhhHHHH
Confidence 99999999999999999999999973 21110 1146889999999999999999999999985 999999999999999
Q ss_pred HHHhhcCCCeEEEEEccCCCChHHHhcCCchHHHHHHhHhCCEEcccCHHHHHHHHHHHHhhhCceecccCceeeEEECC
Q 003025 217 FLRRRFTRLRMGFFLHSPFPSSEIYRTLPVREEILKALLNADLIGFHTFDYARHFLSCCSRMLGLEYQSKRGYIGLEYYG 296 (856)
Q Consensus 217 ~lr~~~~~~~i~~flH~PfP~~e~~~~lp~r~eil~~ll~~dligf~t~~~~~~Fl~~~~r~lg~~~~~~~~~~~~~~~g 296 (856)
|||+++|+++||||||||||++|+||+||+|++||+|||+||+|||||++|+|||++||+|+||++... .++.++|
T Consensus 248 ~LR~~~p~~~IGfFlHiPFPs~Eifr~LP~r~elL~glL~aDlIGFqT~~y~rhFl~~c~rlLg~~~~~----~~v~~~G 323 (934)
T PLN03064 248 CLKEYNSNMKVGWFLHTPFPSSEIHRTLPSRSELLRSVLAADLVGFHTYDYARHFVSACTRILGLEGTP----EGVEDQG 323 (934)
T ss_pred HHHHhCCCCcEEEEecCCCCChHHHhhCCcHHHHHHHHhcCCeEEeCCHHHHHHHHHHHHHHhCccccC----CeEEECC
Confidence 999999999999999999999999999999999999999999999999999999999999999998543 2589999
Q ss_pred EEEEEEEeecccCchHHHHHhcCchHHHHHHHHHHHcCCCeEEEeccCccccCCHHHHHHHHHHHHHhCCCCcCceEEEE
Q 003025 297 RTVGIKIMPVGIHMGQIESVLRLADKDWRVQELKQQFEGKTVLLGVDDMDIFKGVDLKLLAMEHLLKQHPKWQGRAVLVQ 376 (856)
Q Consensus 297 r~~~i~i~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~k~iil~VdRld~~KGi~~~l~A~~~ll~~~p~~~~~vvLvq 376 (856)
|.++|.++|+|||++.|...+..+++.+++++++++|+|+++||||||||++|||.+||+||++||++||+|++||||||
T Consensus 324 r~v~V~~~PiGID~~~f~~~~~~~~v~~~~~~lr~~~~g~kiIlgVDRLD~~KGI~~kL~AfE~fL~~~Pe~r~kVVLvQ 403 (934)
T PLN03064 324 RLTRVAAFPIGIDSDRFIRALETPQVQQHIKELKERFAGRKVMLGVDRLDMIKGIPQKILAFEKFLEENPEWRDKVVLLQ 403 (934)
T ss_pred EEEEEEEEeCEEcHHHHHHHhcChhHHHHHHHHHHHhCCceEEEEeeccccccCHHHHHHHHHHHHHhCccccCCEEEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCcccEEEEcCCCCHHHHHHHHHhcceeeeccccccCCCcccceeeee
Q 003025 377 IANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDKPVTLSERAAYYTIAECVVVTAVRDGMNLTPYEYIVCR 456 (856)
Q Consensus 377 i~~p~r~~~~~~~~l~~~~~~lv~~IN~~~~~~~~~pvv~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~a~~ 456 (856)
|++|+|+++++|+++++++.++|++||++||+.+|+||+|+.+.++++|+.|+|++|||||+||+|||||||++||||||
T Consensus 404 Ia~psr~~v~eY~~l~~~V~~~V~rIN~~fg~~~w~Pv~~~~~~l~~eeL~AlY~~ADV~lvTslrDGmNLva~Eyva~~ 483 (934)
T PLN03064 404 IAVPTRTDVPEYQKLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFHALCALYAVTDVALVTSLRDGMNLVSYEFVACQ 483 (934)
T ss_pred EcCCCCCCcHHHHHHHHHHHHHHHHHhhhccCCCcceEEEeccCCCHHHHHHHHHhCCEEEeCccccccCchHHHHHHhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred cCCCCCCCCCCCCCCCCceEEecCCccccccc-CCceeeCCCCHHHHHHHHHHHHcCCHHHHHHHHHHHhhhhhcCCHHH
Q 003025 457 QGVSGSESSSESSAPKKSMLVVSEFIGCSPSL-SGAIRVNPWNIEATAEAMHEAIQMNEAEKQLRHEKHYRYVSTHDVAY 535 (856)
Q Consensus 457 ~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l-~~al~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~ 535 (856)
.+ ++|+||+|||+|++++| .+|++|||||++++|+||.+||+|+++||+.|+++++++|.+||+.+
T Consensus 484 ~~-------------~~GvLILSEfaGaa~~L~~~AllVNP~D~~~vA~AI~~AL~M~~~Er~~r~~~~~~~V~~~d~~~ 550 (934)
T PLN03064 484 DS-------------KKGVLILSEFAGAAQSLGAGAILVNPWNITEVAASIAQALNMPEEEREKRHRHNFMHVTTHTAQE 550 (934)
T ss_pred cC-------------CCCCeEEeCCCchHHHhCCceEEECCCCHHHHHHHHHHHHhCCHHHHHHHHHHHHhhcccCCHHH
Confidence 74 48999999999999999 58999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhhccccccccCcccceeEeecCcccccCCHHHHHHHHHcCCcEEEEEecCCCCCCCCCC-------
Q 003025 536 WARSFFQDMERTCKDHFKRRCWGIGLSFGFRVVALDPNFRKLSIDAIVSAYLRSKSRAILFDYDGTVMPQTSI------- 608 (856)
Q Consensus 536 W~~~~l~~l~~~~~~~~~~~~~~~g~g~~~~~~~~~~~f~~l~~~~i~~~y~~s~~rlI~~DlDGTLl~~~~~------- 608 (856)
|+++|+.+|.++..++.. ++. . -+.+|+.+.+.++|++++.++||+||||||++..+.
T Consensus 551 Wa~~fl~~L~~~~~~~~~-~~~-----------~---~~~~l~~~~~~~~y~~a~~RLlfLDyDGTLap~~~~P~~~~~~ 615 (934)
T PLN03064 551 WAETFVSELNDTVVEAQL-RTR-----------Q---VPPQLPPEDAIQRYLQSNNRLLILGFNATLTEPVDTPGRRGDQ 615 (934)
T ss_pred HHHHHHHHHHHHHhhhhc-ccc-----------c---cCCCCCHHHHHHHHHhccceEEEEecCceeccCCCCccccccc
Confidence 999999999998655421 111 1 124799999999999999999999999999985432
Q ss_pred ----CCCCCHHHHHHHHHHHhhCCCeEEEecCCChhhHHHhhcCCCCccEEeeCCEEEEeCCCcceEe-cCCCCcccHHH
Q 003025 609 ----NKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSPCKKLGIAAEHGYFMRWSADEEWQN-CGQSVDFGWIQ 683 (856)
Q Consensus 609 ----~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~~~~lgliaenG~~I~~~~~~~w~~-~~~~~~~~w~~ 683 (856)
...|+++++++|++||.++++.|+|+|||+...+++||+.+ +++++|+||++++.++ ..|.. .....+.+|++
T Consensus 616 ~~~~~a~p~p~l~~~L~~L~~dp~n~VaIVSGR~~~~Le~~fg~~-~L~LaAEHG~~~R~~~-~~w~~~~~~~~~~~W~~ 693 (934)
T PLN03064 616 IKEMELRLHPELKEPLRALCSDPKTTIVVLSGSDRSVLDENFGEF-DMWLAAENGMFLRHTK-GEWMTTMPEHLNMDWVD 693 (934)
T ss_pred ccccccCCCHHHHHHHHHHHhCCCCeEEEEeCCCHHHHHHHhCCC-CceEEeeCCeEEecCC-CcceeccccccchHHHH
Confidence 23478999999999999999999999999999999999887 7999999999998764 47873 33334668999
Q ss_pred HHHHHHHHHhhcCCcceEEecccceEEeeecCCCCCCchhHHHHHHHH-HHHhcCCCeEEEEcCeEEEEEeCCCCHHHHH
Q 003025 684 IAEPVMKLYTESTDGSYIEIKESALVWHHRDADPGFGSSQAKELLDHL-ESVLANEPAAVKSGQFIVEVKPQGVSKGVVA 762 (856)
Q Consensus 684 ~v~~i~~~~~~~~~Gs~ie~k~~~l~~~~~~~dp~~~~~~a~el~~~L-~~~l~~~~~~v~~g~~~vEI~p~gvsKG~al 762 (856)
.+.+++++|++++||+++|.|+++++|||+.+||+++..|++++.+++ ...+.+.++.+..|+.++||+|.++|||.|+
T Consensus 694 ~v~~ile~~~eRtPGS~IE~K~~SLawHYR~ADpe~g~~qA~el~~~L~~~~~~~~~v~V~~Gk~VVEVrP~gvnKG~Av 773 (934)
T PLN03064 694 SVKHVFEYFTERTPRSHFETRETSLVWNYKYADVEFGRLQARDMLQHLWTGPISNAAVDVVQGSRSVEVRPVGVTKGAAI 773 (934)
T ss_pred HHHHHHHHHHhcCCCcEEEEcCcEEEEEecCCChhhHHHHHHHHHHHHHhhhccCCCcEEEeCCeEEEEEcCCCCHHHHH
Confidence 999999999999999999999999999999999999999999999999 4455667799999999999999999999999
Q ss_pred HHHHHHhhhcC---CCcceEEEEeCCch-hHHHHHHccccccC--------------------------------C----
Q 003025 763 EKIFTTMAESG---RHADFVLCIGDDRS-DEDMFEIIGNATSS--------------------------------G---- 802 (856)
Q Consensus 763 ~~Ll~~l~~~g---i~~d~vlaiGD~~N-D~~Mf~~ag~~~~~--------------------------------~---- 802 (856)
+.|++++...+ .++|||+|+||+.. ||+||+++...... .
T Consensus 774 ~~ll~~~~~~~~~~~~~DFvlc~GDd~~~DEdmF~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 853 (934)
T PLN03064 774 DRILGEIVHSKSMTTPIDYVLCIGHFLGKDEDIYTFFEPELPSDSPAIARSRSPDGLKSSGDRRPSGKLPSSRSNSKNSQ 853 (934)
T ss_pred HHHHHhhhhccccCCCCCEEEEeCCCCCCcHHHHHHHhccCCcccccccccccCCcccCCccccccCCCccccccccccc
Confidence 99999763222 35899999999875 99999998642110 0
Q ss_pred -----CC-------------------------------CCCccEEEEEeCCCccccceEcCChhHHHHHHHHHHHhcCC
Q 003025 803 -----VL-------------------------------SSNASVFACTVGQKPSKAKYYLDDAAEVVTMLEALAEASAP 845 (856)
Q Consensus 803 -----~~-------------------------------~~~~~~~av~vG~~~s~A~y~l~~~~eV~~~L~~L~~~~~~ 845 (856)
.. -...+.|+|+||.+.|.|+|++++.+||+.+|+.|++.+..
T Consensus 854 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 932 (934)
T PLN03064 854 GKKQRSLLSSAKSGVNHAASHGSDRRPSPEKIGWSVLDLKGENYFSCAVGRKRSNARYLLGSSDDVVSFLKELANASSS 932 (934)
T ss_pred cccCCcccccccccccccccCCccccCCccccccccccccCcceEEEEeccccccceeecCCHHHHHHHHHHHhccccC
Confidence 00 01235699999999999999999999999999999987653
|
|
| >PLN03063 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-151 Score=1367.39 Aligned_cols=752 Identities=36% Similarity=0.682 Sum_probs=670.6
Q ss_pred CCCCeEEEEEcCCccceeecCCCCCeEEEecCCchHHhhhccCCCCCceEEEEccCCCCCcc-hhhhHHHhhccCeeEEE
Q 003025 58 VAQDRVIIVANQLPVKAKRRPDNKGWSFSWDEDSLLLQLKDGLPEDMEVIYVGSLKVDVDLS-EQDDVSQLLLDRFKCVP 136 (856)
Q Consensus 58 ~~~~~~iivsnrlP~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~wvg~~~~~~~~~-~~~~~~~~~~~~~~~~p 136 (856)
..++|+||||||||+.+.+++ +|+|+|+++.|||+.+|.+ + ...+++||||+|.+++++ ++..+.. .+.+|+|+|
T Consensus 8 ~~~~rliiVsnrlp~~~~~~~-~~~~~~~~~~ggl~~al~~-~-~~~~~~Wvgw~g~~~~~~~~~~~~~~-~~~~~~~~p 83 (797)
T PLN03063 8 GERPRLLVVANRLPVSAKRTG-EDSWSLEMSPGGLVSALLG-V-KEFETKWIGWPGVDVHDEIGKAALTE-SLAEKGCIP 83 (797)
T ss_pred cCCCCEEEEECCCCccceecC-CCceEEeeCCCCHHHHHHH-H-HhcCceEEEeCCCcCCcccchhHHHH-HhhcCCeEE
Confidence 457899999999999988764 4789999999999999975 4 457999999999876654 3444443 467899999
Q ss_pred eeCChhhhhhHhhcccccccccccccc-CCCCCC-CCCCcChHhHHHHHHHHHHHHHHHHHHcCCCCCEEEEeCcccchH
Q 003025 137 AFLPPDILTKFYHGFCKQHLWPLFHYM-LPFSAT-HGGRFDRSLWEAYVSANKIFSQRVIEVINPEDDYVWIHDYHLMVL 214 (856)
Q Consensus 137 v~l~~~~~~~~y~gf~~~~lWpl~H~~-~~~~~~-~~~~~~~~~w~~Y~~vN~~fa~~i~~~~~~~~D~VwihDyhl~ll 214 (856)
||| ++++++||+||||++|||+|||+ .+..+. ...+|+++.|++|++||++||++|++.++|+ |+|||||||||+|
T Consensus 84 v~l-~~~~~~~Y~gf~n~~LWPlfH~~~~~~~~~~~~~~~~~~~w~~Y~~vN~~FA~~i~~~~~~~-d~vWvhDYhL~ll 161 (797)
T PLN03063 84 VFL-NEVFDQYYNGYCNNILWPIFHYMGLPQEDRHDATRTFESQYDAYKKANRMFLDVVKENYEEG-DVVWCHDYHLMFL 161 (797)
T ss_pred eeh-HHHHHHHHHHHHhhhcchhhcCcCCCcccccccccccHHHHHHHHHHHHHHHHHHHHhcCCC-CEEEEecchhhhH
Confidence 999 99999999999999999999998 332222 1146677899999999999999999999985 9999999999999
Q ss_pred HHHHHhhcCCCeEEEEEccCCCChHHHhcCCchHHHHHHhHhCCEEcccCHHHHHHHHHHHHhhhCceecccCceeeEEE
Q 003025 215 PTFLRRRFTRLRMGFFLHSPFPSSEIYRTLPVREEILKALLNADLIGFHTFDYARHFLSCCSRMLGLEYQSKRGYIGLEY 294 (856)
Q Consensus 215 p~~lr~~~~~~~i~~flH~PfP~~e~~~~lp~r~eil~~ll~~dligf~t~~~~~~Fl~~~~r~lg~~~~~~~~~~~~~~ 294 (856)
|+|||+++|+++||||||||||++|+||+||+|++||+|||+||+|||||++|+|||++||+|++|+++... .+.+
T Consensus 162 p~~lR~~~~~~~igfFlHiPFPs~e~fr~lp~r~~il~gll~aDligF~t~~y~r~Fl~~~~r~l~~~~~~~----~i~~ 237 (797)
T PLN03063 162 PQYLKEYNNKMKVGWFLHTPFPSSEIYKTLPSRSELLRAVLTADLIGFHTYDFARHFLSACTRILGVEGTHE----GVVD 237 (797)
T ss_pred HHHHHHhCCCCcEEEEecCCCCCHHHHhhCCCHHHHHHHHhcCCEEEeCCHHHHHHHHHHHHHHhCccccCC----ceEE
Confidence 999999999999999999999999999999999999999999999999999999999999999999876432 4789
Q ss_pred CCEEEEEEEeecccCchHHHHHhcCchHHHHHHHHHHHcCCCeEEEeccCccccCCHHHHHHHHHHHHHhCCCCcCceEE
Q 003025 295 YGRTVGIKIMPVGIHMGQIESVLRLADKDWRVQELKQQFEGKTVLLGVDDMDIFKGVDLKLLAMEHLLKQHPKWQGRAVL 374 (856)
Q Consensus 295 ~gr~~~i~i~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~k~iil~VdRld~~KGi~~~l~A~~~ll~~~p~~~~~vvL 374 (856)
+||.++|.++|+|||++.|.+....+++.....+++++++++++|++|||||+.|||.++|+||++||++||+++++++|
T Consensus 238 ~gr~~~I~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~lIl~VgRLd~~KGi~~lL~Afe~lL~~~P~~~~kvvL 317 (797)
T PLN03063 238 QGKVTRVAVFPIGIDPERFINTCELPEVKQHMKELKRFFAGRKVILGVDRLDMIKGIPQKYLAFEKFLEENPEWRDKVML 317 (797)
T ss_pred CCeEEEEEEEecccCHHHHHHHhcChhHHHHHHHHHHhcCCCeEEEEecccccccCHHHHHHHHHHHHHhCccccCcEEE
Confidence 99999999999999999999887777777888889999999999999999999999999999999999999999999999
Q ss_pred EEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCcccEEEEcCCCCHHHHHHHHHhcceeeeccccccCCCcccceee
Q 003025 375 VQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDKPVTLSERAAYYTIAECVVVTAVRDGMNLTPYEYIV 454 (856)
Q Consensus 375 vqi~~p~r~~~~~~~~l~~~~~~lv~~IN~~~~~~~~~pvv~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~a 454 (856)
|||+.|+|+++++|+++++++++++++||.+||+.+|.||+++.+.++.+++.++|++|||||+||++||||||++||||
T Consensus 318 vqia~psr~~~~~y~~l~~~v~~l~g~In~~~g~~~~~pv~~l~~~v~~~el~aly~~ADvfvvtSlrEGmnLv~lEamA 397 (797)
T PLN03063 318 VQIAVPTRNDVPEYQKLKSQVHELVGRINGRFGSVSSVPIHHLDCSVDFNYLCALYAITDVMLVTSLRDGMNLVSYEFVA 397 (797)
T ss_pred EEEecCCCCchHHHHHHHHHHHHHHHHhhcccccCCCceeEEecCCCCHHHHHHHHHhCCEEEeCccccccCcchhhHhe
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eecCCCCCCCCCCCCCCCCceEEecCCccccccc-CCceeeCCCCHHHHHHHHHHHHcCCHHHHHHHHHHHhhhhhcCCH
Q 003025 455 CRQGVSGSESSSESSAPKKSMLVVSEFIGCSPSL-SGAIRVNPWNIEATAEAMHEAIQMNEAEKQLRHEKHYRYVSTHDV 533 (856)
Q Consensus 455 ~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l-~~al~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~ 533 (856)
|+.+ ++|++|+|||+|+++++ .+|++|||||++++|+||.++|+|+++||+.|+++++++|.+||+
T Consensus 398 ~g~p-------------~~gvlVlSe~~G~~~~l~~~allVnP~D~~~lA~AI~~aL~m~~~er~~r~~~~~~~v~~~~~ 464 (797)
T PLN03063 398 CQKA-------------KKGVLVLSEFAGAGQSLGAGALLVNPWNITEVSSAIKEALNMSDEERETRHRHNFQYVKTHSA 464 (797)
T ss_pred eecC-------------CCCCEEeeCCcCchhhhcCCeEEECCCCHHHHHHHHHHHHhCCHHHHHHHHHHHHHhhhhCCH
Confidence 9873 47899999999999999 489999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhhccccccccCcccceeEeecCcccccCCHHHHHHHHHcCCcEEEEEecCCCCCCCCC-----C
Q 003025 534 AYWARSFFQDMERTCKDHFKRRCWGIGLSFGFRVVALDPNFRKLSIDAIVSAYLRSKSRAILFDYDGTVMPQTS-----I 608 (856)
Q Consensus 534 ~~W~~~~l~~l~~~~~~~~~~~~~~~g~g~~~~~~~~~~~f~~l~~~~i~~~y~~s~~rlI~~DlDGTLl~~~~-----~ 608 (856)
.+|+++|+++|.++++++..+. ...+.+|+.+.+..+|+++++++|++||||||++..+ .
T Consensus 465 ~~Wa~~fl~~l~~~~~~~~~~~---------------~~~~~~l~~~~~~~~y~~a~~rll~LDyDGTL~~~~~~~~~p~ 529 (797)
T PLN03063 465 QKWADDFMSELNDIIVEAELRT---------------RNIPLELPEQDVIQQYSKSNNRLLILGFYGTLTEPRNSQIKEM 529 (797)
T ss_pred HHHHHHHHHHHHHHhhhhhhcc---------------cCCCCCCCHHHHHHHHHhccCeEEEEecCccccCCCCCccccc
Confidence 9999999999999887653211 1234579999999999999999999999999998543 2
Q ss_pred CCCCCHHHHHHHHHHHhhCCCeEEEecCCChhhHHHhhcCCCCccEEeeCCEEEEeCCCcceEecC-CCCcccHHHHHHH
Q 003025 609 NKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSPCKKLGIAAEHGYFMRWSADEEWQNCG-QSVDFGWIQIAEP 687 (856)
Q Consensus 609 ~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~~~~lgliaenG~~I~~~~~~~w~~~~-~~~~~~w~~~v~~ 687 (856)
...|+++++++|++|+.++++.|+|+|||+.+.+++|++.+ +++++|+||++++.. +..|.... ...+.+|++.+.+
T Consensus 530 ~a~p~~~l~~~L~~L~~d~~~~V~IvSGR~~~~L~~~~~~~-~l~l~aeHG~~~r~~-~~~w~~~~~~~~~~~w~~~v~~ 607 (797)
T PLN03063 530 DLGLHPELKETLKALCSDPKTTVVVLSRSGKDILDKNFGEY-NIWLAAENGMFLRHT-SGEWVTTMPEHMNLDWVDGVKN 607 (797)
T ss_pred cCCCCHHHHHHHHHHHcCCCCEEEEEeCCCHHHHHHHhCCC-CCcEEEeCCEEEecC-CCceeeccccccChhHHHHHHH
Confidence 24589999999999999999999999999999999999875 799999999999865 45787543 2345789999999
Q ss_pred HHHHHhhcCCcceEEecccceEEeeecCCCCCCchhHHHHHHHHHH-HhcCCCeEEEEcCeEEEEEeCCCCHHHHHHHHH
Q 003025 688 VMKLYTESTDGSYIEIKESALVWHHRDADPGFGSSQAKELLDHLES-VLANEPAAVKSGQFIVEVKPQGVSKGVVAEKIF 766 (856)
Q Consensus 688 i~~~~~~~~~Gs~ie~k~~~l~~~~~~~dp~~~~~~a~el~~~L~~-~l~~~~~~v~~g~~~vEI~p~gvsKG~al~~Ll 766 (856)
+++.|++++||+++|.|+++++|||+.+||+++..++.++.+++.+ .+.+.++.+..|+..+||+|.++|||.|++.++
T Consensus 608 ~l~~~~~rtpGs~iE~K~~sla~HyR~adp~~g~~~a~el~~~l~~~~~~~~~~~v~~Gk~vvEvrp~gvnKG~Av~~ll 687 (797)
T PLN03063 608 VFKYFTDRTPRSYVEKSETSLVWNYEYADVEFGRAQARDMLQHLWAGPISNASVDVVRGQKSVEVHAIGVTKGAAIGRIL 687 (797)
T ss_pred HHHHHHHhCCCcEEEEcCeEEEEEcCCCChHHHHHHHHHHHHHHHHhhccCCCcEEEECCeEEEEEcCCCChHHHHHHHH
Confidence 9999999999999999999999999999999998999999999844 456667999999999999999999999999999
Q ss_pred HHhhhc---CCCcceEEEEeCCc-hhHHHHHHccccccC--------C-----------CCCCCccEEEEEeCCCccccc
Q 003025 767 TTMAES---GRHADFVLCIGDDR-SDEDMFEIIGNATSS--------G-----------VLSSNASVFACTVGQKPSKAK 823 (856)
Q Consensus 767 ~~l~~~---gi~~d~vlaiGD~~-ND~~Mf~~ag~~~~~--------~-----------~~~~~~~~~av~vG~~~s~A~ 823 (856)
+++... +..+|+|+|+||+. .||+||+++...... . .....+++|+|+||.++|+|+
T Consensus 688 ~~~~~~~~~~~~~dfvl~~Gdd~~~DEdmF~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~VG~~~s~A~ 767 (797)
T PLN03063 688 GEIVHNKSMTTPIDFVFCSGYFLEKDEDVYTFFEPEILSKKKSSSSNYSDSDKKVSSNLVDLKGENYFSCAIGQARTKAR 767 (797)
T ss_pred HHhhhccccCCCCCEEEEeCCCCCCcHHHHHhccccccccccccccccccccccccccccccccCceEEEEECCCCccCe
Confidence 976321 23679999999984 699999998742100 0 012356789999999999999
Q ss_pred eEcCChhHHHHHHHHHHHhcCCCCCC
Q 003025 824 YYLDDAAEVVTMLEALAEASAPPSFE 849 (856)
Q Consensus 824 y~l~~~~eV~~~L~~L~~~~~~~~~~ 849 (856)
|||++++||.++|+.|++........
T Consensus 768 y~l~~~~eV~~lL~~l~~~~~~~~~~ 793 (797)
T PLN03063 768 YVLDSSNDVVSLLHKLAVANTTMTDS 793 (797)
T ss_pred ecCCCHHHHHHHHHHHhccCcccccc
Confidence 99999999999999999877665433
|
|
| >PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-142 Score=1290.76 Aligned_cols=720 Identities=35% Similarity=0.667 Sum_probs=658.4
Q ss_pred CeEEEEEcCCccceeecCCCCCeEEEecCCchHHhhhccCCCCCceEEEEccCCCCCc---chhhhHHHhhccCeeEEEe
Q 003025 61 DRVIIVANQLPVKAKRRPDNKGWSFSWDEDSLLLQLKDGLPEDMEVIYVGSLKVDVDL---SEQDDVSQLLLDRFKCVPA 137 (856)
Q Consensus 61 ~~~iivsnrlP~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~wvg~~~~~~~~---~~~~~~~~~~~~~~~~~pv 137 (856)
+|+||||||||+.+++++ |+|+++++.|||+.+|.+.+. ..+++||||+|.+.+. +++.++. ..+.+|+|+||
T Consensus 1 ~~livvsnr~p~~~~~~~--~~~~~~~~~ggl~~~l~~~~~-~~~~~wvg~~g~~~~~~~~~~~~~~~-~~~~~~~~~~v 76 (726)
T PRK14501 1 SRLIIVSNRLPVTVVRED--GGVELTPSVGGLATGLRSFHE-RGGGLWVGWPGLDLEEESEEQRARIE-PRLEELGLVPV 76 (726)
T ss_pred CCEEEEEcCCCcceeecC--CceEEeeCCCchHHHHHHHhh-cCCeEEEEeCCCCccccchhhhhhhh-hhccCceEEEE
Confidence 489999999999988764 589999999999999987654 5899999999987554 2233333 34678999999
Q ss_pred eCChhhhhhHhhccccccccccccccCCCCCCCCCCcChHhHHHHHHHHHHHHHHHHHHcCCCCCEEEEeCcccchHHHH
Q 003025 138 FLPPDILTKFYHGFCKQHLWPLFHYMLPFSATHGGRFDRSLWEAYVSANKIFSQRVIEVINPEDDYVWIHDYHLMVLPTF 217 (856)
Q Consensus 138 ~l~~~~~~~~y~gf~~~~lWpl~H~~~~~~~~~~~~~~~~~w~~Y~~vN~~fa~~i~~~~~~~~D~VwihDyhl~llp~~ 217 (856)
||++++++.||+||||++|||+|||+.+. ..|++++|++|++||++||++|++.++|+ |+|||||||||+||.+
T Consensus 77 ~l~~~~~~~~y~gf~n~~lWp~~H~~~~~-----~~~~~~~w~~Y~~vN~~fA~~~~~~~~~~-d~vwvhDYhl~l~p~~ 150 (726)
T PRK14501 77 FLSAEEVDRYYEGFCNSTLWPLFHYFPEY-----TEFEDRFWESYERVNQRFAEAIAAIARPG-DVVWVHDYQLMLLPAM 150 (726)
T ss_pred eCCHHHHHHHHHHhhhccccchhcccCcc-----cCcCHHHHHHHHHHHHHHHHHHHHhcCCC-CEEEEeCchhhhHHHH
Confidence 99999999999999999999999999765 48999999999999999999999999985 9999999999999999
Q ss_pred HHhhcCCCeEEEEEccCCCChHHHhcCCchHHHHHHhHhCCEEcccCHHHHHHHHHHHHhhhCceecccCceeeEEECCE
Q 003025 218 LRRRFTRLRMGFFLHSPFPSSEIYRTLPVREEILKALLNADLIGFHTFDYARHFLSCCSRMLGLEYQSKRGYIGLEYYGR 297 (856)
Q Consensus 218 lr~~~~~~~i~~flH~PfP~~e~~~~lp~r~eil~~ll~~dligf~t~~~~~~Fl~~~~r~lg~~~~~~~~~~~~~~~gr 297 (856)
||++.|+++||||||+|||++|+|++||+|++||+|||+||+|||||++|++||++||++++++++... .+.++||
T Consensus 151 lr~~~~~~~igfFlH~pfP~~~~f~~lp~~~~ll~~ll~~Dligf~t~~~~r~Fl~~~~~~l~~~~~~~----~~~~~gr 226 (726)
T PRK14501 151 LRERLPDARIGFFLHIPFPSFEVFRLLPWREEILEGLLGADLIGFHTYDYVRHFLSSVLRVLGYETELG----EIRLGGR 226 (726)
T ss_pred HHhhCCCCcEEEEeeCCCCChHHHhhCCChHHHHHHHhcCCeEEeCCHHHHHHHHHHHHHHcCCccCCC----eEEECCE
Confidence 999999999999999999999999999999999999999999999999999999999999999875432 5889999
Q ss_pred EEEEEEeecccCchHHHHHhcCchHHHHHHHHHHHcCCCeEEEeccCccccCCHHHHHHHHHHHHHhCCCCcCceEEEEE
Q 003025 298 TVGIKIMPVGIHMGQIESVLRLADKDWRVQELKQQFEGKTVLLGVDDMDIFKGVDLKLLAMEHLLKQHPKWQGRAVLVQI 377 (856)
Q Consensus 298 ~~~i~i~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~k~iil~VdRld~~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi 377 (856)
.++|.++|+|||++.|.+....+++.+..+++++.++++++|++|||+++.||+..+|+||++|++++|+++|+++|+||
T Consensus 227 ~~~v~v~p~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~~il~VgRl~~~Kgi~~~l~A~~~ll~~~p~~~~~v~lv~v 306 (726)
T PRK14501 227 IVRVDAFPMGIDYDKFHNSAQDPEVQEEIRRLRQDLRGRKIILSIDRLDYTKGIPRRLLAFERFLEKNPEWRGKVRLVQV 306 (726)
T ss_pred EEEEEEEECeEcHHHHHHHhcCchHHHHHHHHHHHcCCCEEEEEecCcccccCHHHHHHHHHHHHHhCccccCCEEEEEE
Confidence 99999999999999999888778888888889999999999999999999999999999999999999999999999999
Q ss_pred ecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCcccEEEEcCCCCHHHHHHHHHhcceeeeccccccCCCcccceeeeec
Q 003025 378 ANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDKPVTLSERAAYYTIAECVVVTAVRDGMNLTPYEYIVCRQ 457 (856)
Q Consensus 378 ~~p~r~~~~~~~~l~~~~~~lv~~IN~~~~~~~~~pvv~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~a~~~ 457 (856)
+.|+|.+.++|+++++++.+++++||++||+.+|.|++++.+.++++|+.++|++|||||+||++||||||++|||||+.
T Consensus 307 ~~~sr~~~~~~~~l~~~~~~~v~~in~~~~~~~~~pv~~~~~~~~~~~l~~ly~~aDv~v~~S~~EG~~lv~~Eama~~~ 386 (726)
T PRK14501 307 AVPSRTGVPQYQEMKREIDELVGRINGEFGTVDWTPIHYFYRSLPFEELVALYRAADVALVTPLRDGMNLVAKEYVASRT 386 (726)
T ss_pred ecCCCcchHHHHHHHHHHHHHHHHHHhhcCCCCcceEEEEeCCCCHHHHHHHHHhccEEEecccccccCcccceEEEEcC
Confidence 99998888999999999999999999999999999999999999999999999999999999999999999999999987
Q ss_pred CCCCCCCCCCCCCCCCceEEecCCcccccccCCceeeCCCCHHHHHHHHHHHHcCCHHHHHHHHHHHhhhhhcCCHHHHH
Q 003025 458 GVSGSESSSESSAPKKSMLVVSEFIGCSPSLSGAIRVNPWNIEATAEAMHEAIQMNEAEKQLRHEKHYRYVSTHDVAYWA 537 (856)
Q Consensus 458 ~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~~al~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~ 537 (856)
+ +.|++|+|+++|+++++.+|++|||||++++|+||.++|+|+.+|++.|++++++++.+||+.+|+
T Consensus 387 ~-------------~~g~~vls~~~G~~~~l~~~llv~P~d~~~la~ai~~~l~~~~~e~~~r~~~~~~~v~~~~~~~w~ 453 (726)
T PRK14501 387 D-------------GDGVLILSEMAGAAAELAEALLVNPNDIEGIAAAIKRALEMPEEEQRERMQAMQERLRRYDVHKWA 453 (726)
T ss_pred C-------------CCceEEEecccchhHHhCcCeEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCCHHHHH
Confidence 4 368999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhccccccccCcccceeEeecCcccccCCHHHHHHHHHcCCcEEEEEecCCCCCCCCC--CCCCCCHH
Q 003025 538 RSFFQDMERTCKDHFKRRCWGIGLSFGFRVVALDPNFRKLSIDAIVSAYLRSKSRAILFDYDGTVMPQTS--INKAPSQA 615 (856)
Q Consensus 538 ~~~l~~l~~~~~~~~~~~~~~~g~g~~~~~~~~~~~f~~l~~~~i~~~y~~s~~rlI~~DlDGTLl~~~~--~~~~~s~~ 615 (856)
++|+.++.++++++.... +..|++|+++.+..+|+.+++|+|++||||||++... ....++++
T Consensus 454 ~~~l~~l~~~~~~~~~~~---------------~~~~~~~~~~~~~~~y~~~~~rLi~~D~DGTL~~~~~~~~~~~~~~~ 518 (726)
T PRK14501 454 SDFLDELREAAEKNKAFA---------------SKPITPAAAEEIIARYRAASRRLLLLDYDGTLVPFAPDPELAVPDKE 518 (726)
T ss_pred HHHHHHHHHHHhhhhccc---------------cccCCccCHHHHHHHHHhccceEEEEecCccccCCCCCcccCCCCHH
Confidence 999999999887653211 1236678999999999999999999999999998432 34568999
Q ss_pred HHHHHHHHHhhCCCeEEEecCCChhhHHHhhcCCCCccEEeeCCEEEEeCCCcceEecCCCCcccHHHHHHHHHHHHhhc
Q 003025 616 VISIINTLCNDARNTVFVVSGRGRDCLGKWFSPCKKLGIAAEHGYFMRWSADEEWQNCGQSVDFGWIQIAEPVMKLYTES 695 (856)
Q Consensus 616 ~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~~~~lgliaenG~~I~~~~~~~w~~~~~~~~~~w~~~v~~i~~~~~~~ 695 (856)
++++|++|++++|+.|+|+|||+...++++++.+ +++++++||++++.++ ..|..... .+..|++.+.++++.+.++
T Consensus 519 ~~~~L~~L~~d~g~~V~ivSGR~~~~l~~~~~~~-~l~liaenG~~i~~~~-~~w~~~~~-~~~~w~~~v~~il~~~~~~ 595 (726)
T PRK14501 519 LRDLLRRLAADPNTDVAIISGRDRDTLERWFGDL-PIHLVAEHGAWSRAPG-GEWQLLEP-VATEWKDAVRPILEEFVDR 595 (726)
T ss_pred HHHHHHHHHcCCCCeEEEEeCCCHHHHHHHhCCC-CeEEEEeCCEEEeCCC-CceEECCC-cchhHHHHHHHHHHHHHhc
Confidence 9999999988899999999999999999999876 5889999999998654 46765432 4578999999999999999
Q ss_pred CCcceEEecccceEEeeecCCCCCCchhHHHHHHHHHHHhcCCCeEEEEcCeEEEEEeCCCCHHHHHHHHHHHhhhcCCC
Q 003025 696 TDGSYIEIKESALVWHHRDADPGFGSSQAKELLDHLESVLANEPAAVKSGQFIVEVKPQGVSKGVVAEKIFTTMAESGRH 775 (856)
Q Consensus 696 ~~Gs~ie~k~~~l~~~~~~~dp~~~~~~a~el~~~L~~~l~~~~~~v~~g~~~vEI~p~gvsKG~al~~Ll~~l~~~gi~ 775 (856)
++|+++|.++.+++|||+++|++++..+++++.++++..+.+.++.+.+|+.++||+|+++|||.|++++++ +++
T Consensus 596 ~~gs~ie~k~~~l~~~~r~~d~~~~~~~a~~l~~~l~~~~~~~~~~v~~g~~~veV~p~~vnKG~al~~ll~-----~~~ 670 (726)
T PRK14501 596 TPGSFIEEKEASLAWHYRNADPELGEARANELILALSSLLSNAPLEVLRGNKVVEVRPAGVNKGRAVRRLLE-----AGP 670 (726)
T ss_pred CCCcEEEEcceEEEEEccCCCHHHHHHHHHHHHHHHHHHhcCCCeEEEECCeEEEEEECCCCHHHHHHHHHh-----cCC
Confidence 999999999999999999999999888889999999888888888899999999999999999999999998 567
Q ss_pred cceEEEEeCCchhHHHHHHccccccCCCCCCCccEEEEEeCCCccccceEcCChhHHHHHHHHHHH
Q 003025 776 ADFVLCIGDDRSDEDMFEIIGNATSSGVLSSNASVFACTVGQKPSKAKYYLDDAAEVVTMLEALAE 841 (856)
Q Consensus 776 ~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~~s~A~y~l~~~~eV~~~L~~L~~ 841 (856)
+++++||||+.||++||+.++.. .++|+||++++.|+|+++++++|+++|+.|++
T Consensus 671 ~d~vl~~GD~~nDe~Mf~~~~~~-----------~~~v~vG~~~s~A~~~l~~~~eV~~~L~~l~~ 725 (726)
T PRK14501 671 YDFVLAIGDDTTDEDMFRALPET-----------AITVKVGPGESRARYRLPSQREVRELLRRLLD 725 (726)
T ss_pred CCEEEEECCCCChHHHHHhcccC-----------ceEEEECCCCCcceEeCCCHHHHHHHHHHHhc
Confidence 89999999999999999998531 28999999999999999999999999999985
|
|
| >KOG1050 consensus Trehalose-6-phosphate synthase component TPS1 and related subunits [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.8e-132 Score=1156.76 Aligned_cols=728 Identities=53% Similarity=0.946 Sum_probs=687.6
Q ss_pred CCeEEEEEcCCccceeecCCCCCeEEEecCCchHHhhhccCCCCCceEEEEccCCCCCcchhhhHHHhhccCeeEEEeeC
Q 003025 60 QDRVIIVANQLPVKAKRRPDNKGWSFSWDEDSLLLQLKDGLPEDMEVIYVGSLKVDVDLSEQDDVSQLLLDRFKCVPAFL 139 (856)
Q Consensus 60 ~~~~iivsnrlP~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~wvg~~~~~~~~~~~~~~~~~~~~~~~~~pv~l 139 (856)
..|+|+||||||+.+.++.+++.|.|+++.+|++.++++++. +++..||||++.++++++++.+.+.++..++|+|||+
T Consensus 2 ~~r~i~vsn~lp~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~-~~~~~~vg~~~~~~~~~~~~~~~~~~~~~~~~~pv~~ 80 (732)
T KOG1050|consen 2 RPRIIVVSNRLPLKASKRTDTGKWSFSFSPGSLVSQLKGIFR-EMEVKWVGPLGDELDDSEKEDVSQELLEEFDSVPVFL 80 (732)
T ss_pred CceEEEEEccCceecccccCCCceeeecCCCCchhhhhcccc-cceeeEEeeccccCchhhHhHhhhhhhhhcCceeeec
Confidence 569999999999999777777899999999999999988766 6899999999988999999999999999999999999
Q ss_pred ChhhhhhHhhcccccccccccccc-CCCCCCCCCCcChHhHHHHHHHHHHHHHHHHHHcCCCCCEEEEeCcccchHHHHH
Q 003025 140 PPDILTKFYHGFCKQHLWPLFHYM-LPFSATHGGRFDRSLWEAYVSANKIFSQRVIEVINPEDDYVWIHDYHLMVLPTFL 218 (856)
Q Consensus 140 ~~~~~~~~y~gf~~~~lWpl~H~~-~~~~~~~~~~~~~~~w~~Y~~vN~~fa~~i~~~~~~~~D~VwihDyhl~llp~~l 218 (856)
+++....+|+||||++|||+|||+ .+..+... .|+.+.|++|+++|+.|||++++.++ ++|+|||||||||++|+++
T Consensus 81 ~~~~~~~~y~~~~~~ilwP~~hy~~~p~~~~~~-~~~~~~w~~y~~~n~~f~d~ive~~~-~~d~vwihdyhlmllp~~l 158 (732)
T KOG1050|consen 81 DDELFDSYYNGYCKSILWPLFHYMLIPSEPAFK-LFDLELWKAYVKVNQAFADKIVEVYE-EGDIVWIHDYHLMLLPQML 158 (732)
T ss_pred CCchhhhhhhhhhhhcccceeecccCCCchhhh-hhHHHHHHHHHHHhHHHHHHHHHhcc-CCCcEEEEcchhhccchhh
Confidence 999999999999999999999999 66666554 78899999999999999999999999 5799999999999999999
Q ss_pred HhhcCCCeEEEEEccCCCChHHHhcCCchHHHHHHhHhCCEEcccCHHHHHHHHHHHHhhhCceecccCceeeEEECCEE
Q 003025 219 RRRFTRLRMGFFLHSPFPSSEIYRTLPVREEILKALLNADLIGFHTFDYARHFLSCCSRMLGLEYQSKRGYIGLEYYGRT 298 (856)
Q Consensus 219 r~~~~~~~i~~flH~PfP~~e~~~~lp~r~eil~~ll~~dligf~t~~~~~~Fl~~~~r~lg~~~~~~~~~~~~~~~gr~ 298 (856)
|++..+++||||+|+|||++|+|||+|.|+|||+||++||+|||||++|+|||++||.|++++++.++.+..++.+.||.
T Consensus 159 r~~~~~~~ig~flhspfpssEi~r~lp~r~eIl~gll~~~~i~f~t~d~arhFls~c~R~l~~~~~s~~~~~~v~~rgr~ 238 (732)
T KOG1050|consen 159 RERFNSAKIGFFLHSPFPSSEIYRCLPVRKEILRGLLYDDLLGFHTDDYARHFLSTCSRLLGLEVASKFPTAGVSGRGRD 238 (732)
T ss_pred hcccccceEEEeccCCCChHHHHHhcccHHHHHHhhhccCccccccccHHHHHHHHHHHHHHhhhhccCCcceEEeccce
Confidence 99999999999999999999999999999999999999999999999999999999999999999988888889999999
Q ss_pred EEEEEeecccCchHHHHHhcCchHHHHHHHHHHHcCCCeEEEeccCccccCCHHHHHHHHHHHHHhCCCCcCceEEEEEe
Q 003025 299 VGIKIMPVGIHMGQIESVLRLADKDWRVQELKQQFEGKTVLLGVDDMDIFKGVDLKLLAMEHLLKQHPKWQGRAVLVQIA 378 (856)
Q Consensus 299 ~~i~i~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~k~iil~VdRld~~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~ 378 (856)
+.|.++|+|||+.+|......+.+..+..++++.++|+++|++|||+|+.||+.+++.||+++|++||+|+++|+|+||+
T Consensus 239 ~~v~~~pigid~~r~v~~~~~~~~~~~~~ei~~~~~g~klilgvD~~d~~kg~~~Kl~a~e~~L~~~pe~~~kVvliqi~ 318 (732)
T KOG1050|consen 239 VSVKALPIGIDVQRFVKLLELPYVGSKGMEIKEPFKGKKLILGVDRLDSIKGIQLKLLAFEQFLEEYPEWIDKVVLIQIE 318 (732)
T ss_pred eeeeecccccchHHhhccccchhHHHHHHHHhhhccCCceEecccccccccCchHHHHHHHHHHHhChhhhceEEEEEEe
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCchhHHHHHHHHHHHHHHHhcccCCCCcccEEEEcCCCCHHHHHHHHHhcceeeeccccccCCCcccceeeeecC
Q 003025 379 NPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDKPVTLSERAAYYTIAECVVVTAVRDGMNLTPYEYIVCRQG 458 (856)
Q Consensus 379 ~p~r~~~~~~~~l~~~~~~lv~~IN~~~~~~~~~pvv~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~a~~~~ 458 (856)
+|+++++++|++++.++..++++||++||+..++||+++...++..++.|+|.+||||++++++|||||+++||++|+++
T Consensus 319 ~~~~~~~~~v~~~k~~v~~~v~rIn~~f~~~~~~pV~~~~~~~~~~~l~a~~~Vaev~~v~s~rdGmnl~~~e~i~~~~~ 398 (732)
T KOG1050|consen 319 NPKRTDGKEVEELKFCVSVHVRRINEKFGSASYQPVHSLLKDLPFLELLALYKVAEVCPVTSWRDGMNLVFLEYILCQEN 398 (732)
T ss_pred cCCcccchHHHHHHHHhHhhhhhhhhccCCcccceEEEeeccCCHHHHhhhHHhhhheeecccccccchhhhHHHHhhcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999883
Q ss_pred CCCCCCCCCCCCCCCceEEecCCccccccc-CCceeeCCCCHHHHHHHHHHHHcCCHHHHHHHHHHHhhhhhcCCHHHHH
Q 003025 459 VSGSESSSESSAPKKSMLVVSEFIGCSPSL-SGAIRVNPWNIEATAEAMHEAIQMNEAEKQLRHEKHYRYVSTHDVAYWA 537 (856)
Q Consensus 459 ~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l-~~al~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~ 537 (856)
+.+++|+|||+|+++++ +++++|||||.+++|.+|..+|+|+.+|++.|+.++++++..|++..|+
T Consensus 399 -------------~~~~lVlsef~G~~~tl~d~aivvnpw~~~~~~~~i~~al~~s~~e~~~r~~~~~~~v~~~~~~~W~ 465 (732)
T KOG1050|consen 399 -------------KKSVLVLSEFIGDDTTLEDAAIVVNPWDGDEFAILISKALTMSDEERELREPKHYKYVSTHDVVYWA 465 (732)
T ss_pred -------------cCCceEEeeeccccccccccCEEECCcchHHHHHHHHHHhhcCHHHHhhcchhhhhhhcchhHHHHH
Confidence 47899999999999999 7899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhccccccccCcccceeEeecCcccccCCHHHHHHHHHcCCcEEEEEecCCCCCCCCCCCCCCCHHHH
Q 003025 538 RSFFQDMERTCKDHFKRRCWGIGLSFGFRVVALDPNFRKLSIDAIVSAYLRSKSRAILFDYDGTVMPQTSINKAPSQAVI 617 (856)
Q Consensus 538 ~~~l~~l~~~~~~~~~~~~~~~g~g~~~~~~~~~~~f~~l~~~~i~~~y~~s~~rlI~~DlDGTLl~~~~~~~~~s~~~~ 617 (856)
..|++.+ ++||+.|+ +.+++..+ |+.+.+++.|+++++|+|++|||||++...+.. ++
T Consensus 466 ~~~~~~l---------~~~~~~~~-~~~~~~~~------l~~~~~i~~y~~s~~rli~ldyd~t~~~~~~~~------~~ 523 (732)
T KOG1050|consen 466 KSFLQGL---------KRIWKVGF-LGFRVTPL------LTAEHIVSDYKKSKKRLILLDYDLTLIPPRSIK------AI 523 (732)
T ss_pred HHHHHhh---------hhhhhhcc-cccccccc------cChhHhhhhhhhccceEEEecccccccCCCCch------HH
Confidence 9999944 45677788 88887665 788999999999999999999999999843222 99
Q ss_pred HHHHHHHhhCCCeEEEecCCChhhHHHhhcCCCCccEEeeCCEEEEeCCCcceEecCCCCcccHHHHHHHHHHHHhhcCC
Q 003025 618 SIINTLCNDARNTVFVVSGRGRDCLGKWFSPCKKLGIAAEHGYFMRWSADEEWQNCGQSVDFGWIQIAEPVMKLYTESTD 697 (856)
Q Consensus 618 ~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~~~~lgliaenG~~I~~~~~~~w~~~~~~~~~~w~~~v~~i~~~~~~~~~ 697 (856)
..|+.||.|++|.|+|+|||++..+..|+..++++|++||||++++.+++ |++.. .+.+|++.+++++++|+++||
T Consensus 524 ~~l~~L~~dp~n~v~i~s~~~r~~l~~~~~~~~~lgl~aEhG~f~r~~~~--w~~~~--~~~~w~~~v~~i~~~~~ert~ 599 (732)
T KOG1050|consen 524 SILKDLCSDPKNIVYIVSGRGRSVLEKWFFGCKNLGLAAEHGYFVRIPGK--WETCV--LDLDWKDLVKDIFQYYTERTP 599 (732)
T ss_pred HHHHHHhcCCCCeEEEEEccCchhhhhhccccccceeecccCceeccCCc--eeeec--ccccHHHHHHHHHHHHHhcCC
Confidence 99999999999999999999999999999999999999999999999987 99876 788999999999999999999
Q ss_pred cceEEecccceEEeeecCCCCCCchhHHHHHHHHHHHhcCCCeEEEEcCeEEEEEeCCCCHHHHHHHHHHHhhhcCCCcc
Q 003025 698 GSYIEIKESALVWHHRDADPGFGSSQAKELLDHLESVLANEPAAVKSGQFIVEVKPQGVSKGVVAEKIFTTMAESGRHAD 777 (856)
Q Consensus 698 Gs~ie~k~~~l~~~~~~~dp~~~~~~a~el~~~L~~~l~~~~~~v~~g~~~vEI~p~gvsKG~al~~Ll~~l~~~gi~~d 777 (856)
|+++|.++++++|||+++||+++.+||+|+.++|+. .+.++.+..|+..|||.|.|+|||.++..++..+ ..++|
T Consensus 600 GS~ie~k~~~l~~hy~~ad~~~g~~qA~el~~~l~~--~~~~~~v~~g~~~Vev~~~gvsk~~~~~~~~~~~---~~~~d 674 (732)
T KOG1050|consen 600 GSYIERKETALVWHYRNADPEFGELQAKELLEHLES--KNEPVEVVRGKHIVEVRPQGVSKGLAAERILSEM---VKEPD 674 (732)
T ss_pred CceecccCceEEEeeeccCcchhHHHHHHHHHHhcc--cCCCeEEEecCceEEEcccccchHHHHHHHHHhc---CCCcc
Confidence 999999999999999999999999999999999988 7889999999999999999999999999999998 56789
Q ss_pred eEEEEeCCchhHHHHHHccccccCCCCCCCccEEEEEeCCCccccceEcCChhHHHHHHH
Q 003025 778 FVLCIGDDRSDEDMFEIIGNATSSGVLSSNASVFACTVGQKPSKAKYYLDDAAEVVTMLE 837 (856)
Q Consensus 778 ~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~~s~A~y~l~~~~eV~~~L~ 837 (856)
+++|+||+..|++||..+......+.. .+.|+|++|.++|+|+|+++++.+|+++|+
T Consensus 675 f~~c~g~d~tDed~~~~~~~~~~~~~~---~~~F~~~~g~~~t~a~~~~~~~~~v~~~l~ 731 (732)
T KOG1050|consen 675 FVLCIGDDRTDEDMFEFISKAKDPEKV---EEIFACTVGQKPSKAKYFLDDTHEVIRLLQ 731 (732)
T ss_pred eEEEecCCCChHHHHHHHhhccCCccc---ceEEEEEcCCCCcccccccCChHHHHhhcc
Confidence 999999999999999999765322111 678999999999999999999999999885
|
|
| >PRK10117 trehalose-6-phosphate synthase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6e-121 Score=1023.81 Aligned_cols=455 Identities=27% Similarity=0.531 Sum_probs=420.4
Q ss_pred CeEEEEEcCCccceeecCCCCCeEEEecCCchHHhhhccCCCCCceEEEEccCCCCCcchhhhHHHhhccCeeEEEeeCC
Q 003025 61 DRVIIVANQLPVKAKRRPDNKGWSFSWDEDSLLLQLKDGLPEDMEVIYVGSLKVDVDLSEQDDVSQLLLDRFKCVPAFLP 140 (856)
Q Consensus 61 ~~~iivsnrlP~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~wvg~~~~~~~~~~~~~~~~~~~~~~~~~pv~l~ 140 (856)
+|+||||||+|+... + +.+.|||+++|.+.+. ..+++||||+|...++ .+.+......+|+|.||+|+
T Consensus 2 ~rLivVSNRlp~~~~-------~--~~~~GGL~~aL~~~l~-~~~g~WvGW~g~~~~~--~~~~~~~~~~~~~~~~v~L~ 69 (474)
T PRK10117 2 SRLVVVSNRIAPPDE-------H--KASAGGLAVGILGALK-AAGGLWFGWSGETGNE--DQPLKKVKKGNITWASFNLS 69 (474)
T ss_pred CCEEEEECCCcCCCC-------C--CcCCCCcHHHHHHHHH-hcCceEEEecCCCCCC--cccchhhhcCCceEEEecCC
Confidence 589999999996321 1 3457999999988775 4799999999964322 22233333467999999999
Q ss_pred hhhhhhHhhccccccccccccccCCCCCCCCCCcChHhHHHHHHHHHHHHHHHHHHcCCCCCEEEEeCcccchHHHHHHh
Q 003025 141 PDILTKFYHGFCKQHLWPLFHYMLPFSATHGGRFDRSLWEAYVSANKIFSQRVIEVINPEDDYVWIHDYHLMVLPTFLRR 220 (856)
Q Consensus 141 ~~~~~~~y~gf~~~~lWpl~H~~~~~~~~~~~~~~~~~w~~Y~~vN~~fa~~i~~~~~~~~D~VwihDyhl~llp~~lr~ 220 (856)
++++++||+||||++|||+|||+.+. ..|+++.|++|++||++||++|++.++|+ |+|||||||||+||.+||+
T Consensus 70 ~~~~~~yY~gfsn~~LWPlfHy~~~~-----~~~~~~~w~~Y~~VN~~FA~~v~~~~~~~-D~VWVHDYhL~llp~~LR~ 143 (474)
T PRK10117 70 EQDYDEYYNQFSNAVLWPAFHYRLDL-----VQFQRPAWEGYLRVNALLADKLLPLLKDD-DIIWIHDYHLLPFASELRK 143 (474)
T ss_pred HHHHHHHHhhhhhcchhhhhCCCCCc-----cCcCHHHHHHHHHHHHHHHHHHHHhcCCC-CEEEEeccHhhHHHHHHHH
Confidence 99999999999999999999999765 58999999999999999999999999985 9999999999999999999
Q ss_pred hcCCCeEEEEEccCCCChHHHhcCCchHHHHHHhHhCCEEcccCHHHHHHHHHHHHhhhCceecccCceeeEEECCEEEE
Q 003025 221 RFTRLRMGFFLHSPFPSSEIYRTLPVREEILKALLNADLIGFHTFDYARHFLSCCSRMLGLEYQSKRGYIGLEYYGRTVG 300 (856)
Q Consensus 221 ~~~~~~i~~flH~PfP~~e~~~~lp~r~eil~~ll~~dligf~t~~~~~~Fl~~~~r~lg~~~~~~~~~~~~~~~gr~~~ 300 (856)
+.|+++||||||||||++|+|++||+|+|||+|||+||+|||||++|++||++||++++|++.... ..+.++||.+.
T Consensus 144 ~~~~~~IgFFlHiPFPs~eifr~LP~r~eil~glL~aDlIGFqt~~y~rnFl~~~~~~lg~~~~~~---~~v~~~gr~v~ 220 (474)
T PRK10117 144 RGVNNRIGFFLHIPFPTPEIFNALPPHDELLEQLCDYDLLGFQTENDRLAFLDCLSNLTRVTTRSG---KSHTAWGKAFR 220 (474)
T ss_pred hCCCCcEEEEEeCCCCChHHHhhCCChHHHHHHHHhCccceeCCHHHHHHHHHHHHHHcCCcccCC---CeEEECCeEEE
Confidence 999999999999999999999999999999999999999999999999999999999999876432 25678899999
Q ss_pred EEEeecccCchHHHHHhcCchHHHHHHHHHHHcCCCeEEEeccCccccCCHHHHHHHHHHHHHhCCCCcCceEEEEEecC
Q 003025 301 IKIMPVGIHMGQIESVLRLADKDWRVQELKQQFEGKTVLLGVDDMDIFKGVDLKLLAMEHLLKQHPKWQGRAVLVQIANP 380 (856)
Q Consensus 301 i~i~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~k~iil~VdRld~~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p 380 (856)
|+++|+|||++.|...+..+ +..++++++++++|+++|+|||||||+|||.++|+||++||++||+|+||++|+||+.|
T Consensus 221 v~~~PigID~~~~~~~a~~~-~~~~~~~lr~~~~~~~lilgVDRLDytKGi~~rl~Afe~fL~~~Pe~~gkvvlvQia~p 299 (474)
T PRK10117 221 TEVYPIGIEPDEIAKQAAGP-LPPKLAQLKAELKNVQNIFSVERLDYSKGLPERFLAYEALLEKYPQHHGKIRYTQIAPT 299 (474)
T ss_pred EEEEECeEcHHHHHHHhhch-HHHHHHHHHHHcCCCeEEEEecccccccCHHHHHHHHHHHHHhChhhcCCEEEEEEcCC
Confidence 99999999999999887755 56778899999999999999999999999999999999999999999999999999999
Q ss_pred CCCCchhHHHHHHHHHHHHHHHhcccCCCCcccEEEEcCCCCHHHHHHHHHhcceeeeccccccCCCcccceeeeecCCC
Q 003025 381 ARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDKPVTLSERAAYYTIAECVVVTAVRDGMNLTPYEYIVCRQGVS 460 (856)
Q Consensus 381 ~r~~~~~~~~l~~~~~~lv~~IN~~~~~~~~~pvv~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~a~~~~~~ 460 (856)
+|+++++|++++++++++|++||++||+.+|+||+|+.+.++++++.|+|++||||+|||+|||||||++||+|||..
T Consensus 300 sR~~v~~Y~~l~~~v~~~vg~INg~fg~~~w~Pv~y~~~~~~~~~l~alyr~ADv~lVTplRDGMNLVAkEyva~q~~-- 377 (474)
T PRK10117 300 SRGDVQAYQDIRHQLETEAGRINGKYGQLGWTPLYYLNQHFDRKLLMKIFRYSDVGLVTPLRDGMNLVAKEYVAAQDP-- 377 (474)
T ss_pred CCCccHHHHHHHHHHHHHHHHHHhccCCCCceeEEEecCCCCHHHHHHHHHhccEEEecccccccccccchheeeecC--
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999999862
Q ss_pred CCCCCCCCCCCCCceEEecCCcccccccCCceeeCCCCHHHHHHHHHHHHcCCHHHHHHHHHHHhhhhhcCCHHHHHHHH
Q 003025 461 GSESSSESSAPKKSMLVVSEFIGCSPSLSGAIRVNPWNIEATAEAMHEAIQMNEAEKQLRHEKHYRYVSTHDVAYWARSF 540 (856)
Q Consensus 461 ~~~~~~~~~~~~~g~lV~Se~~G~~~~l~~al~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~~ 540 (856)
+++|+||+|||+||+++|.+|++|||||++++|+||++||+||.+||+.|+++++++|.+||+.+|+++|
T Consensus 378 ----------~~~GvLILSefAGaA~~L~~AllVNP~d~~~~A~Ai~~AL~Mp~~Er~~R~~~l~~~v~~~dv~~W~~~f 447 (474)
T PRK10117 378 ----------ANPGVLVLSQFAGAANELTSALIVNPYDRDEVAAALDRALTMPLAERISRHAEMLDVIVKNDINHWQECF 447 (474)
T ss_pred ----------CCCccEEEecccchHHHhCCCeEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhhhCCHHHHHHHH
Confidence 3479999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHH
Q 003025 541 FQDMERTCK 549 (856)
Q Consensus 541 l~~l~~~~~ 549 (856)
+.+|.++..
T Consensus 448 L~~L~~~~~ 456 (474)
T PRK10117 448 ISDLKQIVP 456 (474)
T ss_pred HHHHHHhhh
Confidence 999998754
|
|
| >TIGR02398 gluc_glyc_Psyn glucosylglycerol-phosphate synthase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-119 Score=1023.20 Aligned_cols=462 Identities=27% Similarity=0.470 Sum_probs=428.0
Q ss_pred EEcCCccceeecCCC-CCeEEEecCCchHHhhhccCCCCCceEEEEccCCCCCc-chh-hhHHHhhccCeeEEEeeCChh
Q 003025 66 VANQLPVKAKRRPDN-KGWSFSWDEDSLLLQLKDGLPEDMEVIYVGSLKVDVDL-SEQ-DDVSQLLLDRFKCVPAFLPPD 142 (856)
Q Consensus 66 vsnrlP~~~~~~~~~-~~~~~~~~~~~l~~~l~~~~~~~~~~~wvg~~~~~~~~-~~~-~~~~~~~~~~~~~~pv~l~~~ 142 (856)
||||||+.+++++++ ..|.+++++|||+++|.+.+.+..+++||||+|.+.++ ++. ..+......+|+|.||||+++
T Consensus 1 vsnRlP~~~~~~~~g~~~~~~~~s~gGL~~al~~~l~~~~~g~Wvgw~g~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~~ 80 (487)
T TIGR02398 1 LYHRLPYDEFRGADGKLQRRDPTSPNGIIPTLLSFFGDGRAGTWVAWAEHDENSGETFDSHMTVPAEYKLTAARIPLSKE 80 (487)
T ss_pred CCcCCCceeEECCCCCceEEeccCCCchHHHHHHHhhcccceEEEeeCCCCcccccccccccccccCCceeEEEEeCCHH
Confidence 799999999987643 35888999999999999877656789999999975321 111 112212245799999999999
Q ss_pred hhhhHhhccccccccccccccCCCCCCCCCCcChHhHHHHHHHHHHHHHHHHHHcCCCCCEEEEeCcccchHHHHHHhhc
Q 003025 143 ILTKFYHGFCKQHLWPLFHYMLPFSATHGGRFDRSLWEAYVSANKIFSQRVIEVINPEDDYVWIHDYHLMVLPTFLRRRF 222 (856)
Q Consensus 143 ~~~~~y~gf~~~~lWpl~H~~~~~~~~~~~~~~~~~w~~Y~~vN~~fa~~i~~~~~~~~D~VwihDyhl~llp~~lr~~~ 222 (856)
+++.||+||||++|||+|||+... ..|+++.|++|++||++||++|++.++|+ |+|||||||||+||.+||++.
T Consensus 81 ~~~~~Y~gf~n~~LWPlfH~~~~~-----~~~~~~~w~~Y~~vN~~FA~~i~~~~~~~-d~vWVhDYhL~llp~~LR~~~ 154 (487)
T TIGR02398 81 QVDIFYHITSKEAFWPILHTFPER-----FQFREDDWQVFLKVNRAFAEAACLEAAEG-ATVWVHDYNLWLVPGYIRQLR 154 (487)
T ss_pred HHHHHHhhhhhccccccccCCccc-----cCcCHHHHHHHHHHHHHHHHHHHHhcCCC-CEEEEecchhhHHHHHHHHhC
Confidence 999999999999999999998644 58999999999999999999999999984 999999999999999999999
Q ss_pred CCCeEEEEEccCCCChHHHhcCCchHHHHHHhHhCCEEcccCHHHHHHHHHHHHhhhCceecccC---------------
Q 003025 223 TRLRMGFFLHSPFPSSEIYRTLPVREEILKALLNADLIGFHTFDYARHFLSCCSRMLGLEYQSKR--------------- 287 (856)
Q Consensus 223 ~~~~i~~flH~PfP~~e~~~~lp~r~eil~~ll~~dligf~t~~~~~~Fl~~~~r~lg~~~~~~~--------------- 287 (856)
|+++||||||||||++|+|++||+|++||+|||+||+|||||++|++||++||+|+||+++....
T Consensus 155 ~~~~IgfFlHiPFPs~eifr~LP~r~~ll~glL~aDliGFqt~~y~~~Fl~~~~r~lg~~~~~~~~~~~~~~~~g~~~~~ 234 (487)
T TIGR02398 155 PDLKIAFFHHTPFPSADVFNILPWREQIIGSLLCCDYIGFHIPRYVENFVDAARGLMPLQTVSRQNVDPRFITVGTALGE 234 (487)
T ss_pred CCCeEEEEeeCCCCChHHHhhCCchHHHHHHHhcCCeEEeCCHHHHHHHHHHHHHHhCCccccccccccccccccccccc
Confidence 99999999999999999999999999999999999999999999999999999999998875432
Q ss_pred --ceeeEEECCEEEEEEEeecccCchHHHHHhcCchHHHHHHHHHHHcCCCeEEEeccCccccCCHHHHHHHHHHHHHhC
Q 003025 288 --GYIGLEYYGRTVGIKIMPVGIHMGQIESVLRLADKDWRVQELKQQFEGKTVLLGVDDMDIFKGVDLKLLAMEHLLKQH 365 (856)
Q Consensus 288 --~~~~~~~~gr~~~i~i~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~k~iil~VdRld~~KGi~~~l~A~~~ll~~~ 365 (856)
..+++.++||+++|+++|+|||++.|.+....+++.+.++++|+++.|+++|++|||||++|||.++|+||++||++|
T Consensus 235 ~~~~~~v~~~gr~v~v~~~PiGID~~~f~~~~~~~~~~~~~~~lr~~~~~~kiIl~VDRLDy~KGI~~kl~Afe~~L~~~ 314 (487)
T TIGR02398 235 ERMTTALDTGNRVVKLGAHPVGTDPERIRSALAAASIREMMERIRSELAGVKLILSAERVDYTKGILEKLNAYERLLERR 314 (487)
T ss_pred cccccceeECCEEEEEEEEECEecHHHHHHHhcCchHHHHHHHHHHHcCCceEEEEecccccccCHHHHHHHHHHHHHhC
Confidence 123588999999999999999999999988889999999999999999999999999999999999999999999999
Q ss_pred CCCcCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCcccEEEEcCCCCHHHHHHHHHhcceeeeccccccC
Q 003025 366 PKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDKPVTLSERAAYYTIAECVVVTAVRDGM 445 (856)
Q Consensus 366 p~~~~~vvLvqi~~p~r~~~~~~~~l~~~~~~lv~~IN~~~~~~~~~pvv~~~~~v~~~el~aly~~ADv~vvtS~~EG~ 445 (856)
|+|+||++||||+.|+|++.++|++++++++++|++||++||+.+|+||+++.+.++++++.+||++||||++||+||||
T Consensus 315 Pe~~gkv~Lvqi~~psr~~v~~y~~l~~~v~~~v~~IN~~fg~~~~~pv~~~~~~v~~~el~alYr~ADV~lvT~lrDGm 394 (487)
T TIGR02398 315 PELLGKVTLVTACVPAASGMTIYDELQGQIEQAVGRINGRFARIGWTPLQFFTRSLPYEEVSAWFAMADVMWITPLRDGL 394 (487)
T ss_pred ccccCceEEEEEeCCCcccchHHHHHHHHHHHHHHHHhhccCCCCCccEEEEcCCCCHHHHHHHHHhCCEEEECcccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcccceeeeecCCCCCCCCCCCCCCCCceEEecCCcccccccCCceeeCCCCHHHHHHHHHHHHcCCHHHHHHHHHHHh
Q 003025 446 NLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIGCSPSLSGAIRVNPWNIEATAEAMHEAIQMNEAEKQLRHEKHY 525 (856)
Q Consensus 446 nLv~~Ea~a~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~~al~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~ 525 (856)
|||++||||||.+ ++||||+|||+||+++|.+|++|||||++++|+||.+||+||.+||+.|+++++
T Consensus 395 NLVa~Eyva~~~~-------------~~GvLILSefaGaa~~l~~AllVNP~d~~~~A~ai~~AL~m~~~Er~~R~~~l~ 461 (487)
T TIGR02398 395 NLVAKEYVAAQGL-------------LDGVLVLSEFAGAAVELKGALLTNPYDPVRMDETIYVALAMPKAEQQARMREMF 461 (487)
T ss_pred CcchhhHHhhhcC-------------CCCCEEEeccccchhhcCCCEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 9999999999874 478999999999999999999999999999999999999999999999999999
Q ss_pred hhhhcCCHHHHHHHHHHHHHH
Q 003025 526 RYVSTHDVAYWARSFFQDMER 546 (856)
Q Consensus 526 ~~v~~~~~~~W~~~~l~~l~~ 546 (856)
++|.+||+.+|+++|+.+|..
T Consensus 462 ~~v~~~d~~~W~~~fl~~l~~ 482 (487)
T TIGR02398 462 DAVNYYDVQRWADEFLAAVSP 482 (487)
T ss_pred HHHhhCCHHHHHHHHHHHhhh
Confidence 999999999999999999875
|
Glucosylglycerol-phosphate synthase catalyzes the key step in the biosynthesis of the osmolyte glucosylglycerol. It is known in several cyanobacteria and in Pseudomonas anguilliseptica. The enzyme is closely related to the alpha,alpha-trehalose-phosphate synthase, likewise involved in osmolyte biosynthesis, of E. coli and many other bacteria. A close homolog from Xanthomonas campestris is excluded from this model and scores between trusted and noise. |
| >PF00982 Glyco_transf_20: Glycosyltransferase family 20; InterPro: IPR001830 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=5e-120 Score=1031.30 Aligned_cols=467 Identities=46% Similarity=0.867 Sum_probs=359.7
Q ss_pred eEEEEEcCCccceeecCCCCC--eEEEecCCchHHhhhccCCCCCceEEEEccCCCCCcch--hhhHHHhhccCeeEEEe
Q 003025 62 RVIIVANQLPVKAKRRPDNKG--WSFSWDEDSLLLQLKDGLPEDMEVIYVGSLKVDVDLSE--QDDVSQLLLDRFKCVPA 137 (856)
Q Consensus 62 ~~iivsnrlP~~~~~~~~~~~--~~~~~~~~~l~~~l~~~~~~~~~~~wvg~~~~~~~~~~--~~~~~~~~~~~~~~~pv 137 (856)
|+||||||||+.+++++++|. |+++.+.|||+.+|.+.+ +..+++||||+|.+.+..+ ++.+.+.+.++|+|+||
T Consensus 2 ~livVsnrlPv~~~r~~~~G~~~~~~~~~~ggL~~al~~l~-~~~~~~WvGw~g~~~~~~~~~~~~v~~~~~~~~~~~pV 80 (474)
T PF00982_consen 2 RLIVVSNRLPVSVKRDPDDGSWGWSWKPSAGGLVSALDPLL-KKRGGIWVGWPGVDVDEEEDEQDRVEPRLLDEYNCVPV 80 (474)
T ss_dssp -------------------------GGGGS-HHHHHHHHHH-HHH-EEEEEEEEEES-TTS---EEEE---ETTEEEEEE
T ss_pred CcccccccccccccccccccccccccccCCCcHHHHHHHHH-hcCCCEEEEeCCCcCccccccccchhhhcccCceEEEE
Confidence 799999999999999874555 888888899999987644 3589999999998876544 56677778899999999
Q ss_pred eCChhhhhhHhhccccccccccccccCCCCCCCCCCcChHhHHHHHHHHHHHHHHHHHHcCCCCCEEEEeCcccchHHHH
Q 003025 138 FLPPDILTKFYHGFCKQHLWPLFHYMLPFSATHGGRFDRSLWEAYVSANKIFSQRVIEVINPEDDYVWIHDYHLMVLPTF 217 (856)
Q Consensus 138 ~l~~~~~~~~y~gf~~~~lWpl~H~~~~~~~~~~~~~~~~~w~~Y~~vN~~fa~~i~~~~~~~~D~VwihDyhl~llp~~ 217 (856)
||+++++++||+||||++|||+|||.++..|. ...|+++.|++|++||++||++|++.++| +|+|||||||||+||.+
T Consensus 81 ~l~~~~~~~~Y~gf~n~~LWPlfHy~~~~~~~-~~~~~~~~w~~Y~~vN~~FA~~i~~~~~~-~D~VWVhDYhL~llP~~ 158 (474)
T PF00982_consen 81 FLSPEEYDGYYNGFCNQVLWPLFHYRLDSRPD-LARFEEEWWEAYKRVNRRFADAIAEVYRP-GDLVWVHDYHLMLLPQM 158 (474)
T ss_dssp EE-HHHHHHHTTTHHHHTHHHHHTT-GG-----G----HHHHHHHHHHHHHHHHHHGGG--T-T-EEEEESGGGTTHHHH
T ss_pred EcCHHHHHHHHHhhhhhccCcccccccccccc-cchhhHHHHHHHHHHHHHHHHHHHHhCcC-CCEEEEeCCcHHHHHHH
Confidence 99999999999999999999999998762222 26899999999999999999999999997 59999999999999999
Q ss_pred HHhhcCCCeEEEEEccCCCChHHHhcCCchHHHHHHhHhCCEEcccCHHHHHHHHHHHHhhhCceecccCceeeEEECCE
Q 003025 218 LRRRFTRLRMGFFLHSPFPSSEIYRTLPVREEILKALLNADLIGFHTFDYARHFLSCCSRMLGLEYQSKRGYIGLEYYGR 297 (856)
Q Consensus 218 lr~~~~~~~i~~flH~PfP~~e~~~~lp~r~eil~~ll~~dligf~t~~~~~~Fl~~~~r~lg~~~~~~~~~~~~~~~gr 297 (856)
||+++|+++||||||||||++|+||+||+|++||+|||+||+|||||++|++||++||+|++|+++...+| ++.++||
T Consensus 159 LR~~~~~~~IgfFlHiPFPs~e~fr~lP~r~eiL~glL~aDlIgFqt~~~~~nFl~~~~r~lg~~~~~~~~--~v~~~Gr 236 (474)
T PF00982_consen 159 LRERGPDARIGFFLHIPFPSSEIFRCLPWREEILRGLLGADLIGFQTFEYARNFLSCCKRLLGLEVDSDRG--TVEYNGR 236 (474)
T ss_dssp HHHTT--SEEEEEE-S----HHHHTTSTTHHHHHHHHTTSSEEEESSHHHHHHHHHHHHHHS-EEEEETTE---EEETTE
T ss_pred HHhhcCCceEeeEEecCCCCHHHHhhCCcHHHHHHHhhcCCEEEEecHHHHHHHHHHHHHHcCCcccCCCc--eEEECCE
Confidence 99999999999999999999999999999999999999999999999999999999999999999988776 6999999
Q ss_pred EEEEEEeecccCchHHHHHhcCchHHHHHHHHHHHcCC-CeEEEeccCccccCCHHHHHHHHHHHHHhCCCCcCceEEEE
Q 003025 298 TVGIKIMPVGIHMGQIESVLRLADKDWRVQELKQQFEG-KTVLLGVDDMDIFKGVDLKLLAMEHLLKQHPKWQGRAVLVQ 376 (856)
Q Consensus 298 ~~~i~i~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~-k~iil~VdRld~~KGi~~~l~A~~~ll~~~p~~~~~vvLvq 376 (856)
.++|.++|+|||++.|...+.++++.++++++++++++ +++|+||||+|++|||.+||+||++||++||+|+|||+|+|
T Consensus 237 ~v~v~~~pigId~~~~~~~~~~~~v~~~~~~l~~~~~~~~~ii~gvDrld~~kGi~~kl~Afe~fL~~~P~~~~kv~liQ 316 (474)
T PF00982_consen 237 RVRVGVFPIGIDPDAFAQLARSPEVQERAEELREKFKGKRKIIVGVDRLDYTKGIPEKLRAFERFLERYPEYRGKVVLIQ 316 (474)
T ss_dssp EEEEEE------HHHHHHHHH-S---HHHHHHHHHTTT-SEEEEEE--B-GGG-HHHHHHHHHHHHHH-GGGTTTEEEEE
T ss_pred EEEEEEeeccCChHHHHhhccChHHHHHHHHHHHhcCCCcEEEEEeccchhhcCHHHHHHHHHHHHHhCcCccCcEEEEE
Confidence 99999999999999999999999999999999999988 49999999999999999999999999999999999999999
Q ss_pred EecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCcccEEEEcCCCCHHHHHHHHHhcceeeeccccccCCCcccceeeee
Q 003025 377 IANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDKPVTLSERAAYYTIAECVVVTAVRDGMNLTPYEYIVCR 456 (856)
Q Consensus 377 i~~p~r~~~~~~~~l~~~~~~lv~~IN~~~~~~~~~pvv~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~a~~ 456 (856)
|+.|+|++.++|++++++++++|++||++||+.+|+||+++.+.++++++.|+|++||||++||+|||||||++||++||
T Consensus 317 i~~psr~~~~~y~~~~~~v~~~v~~IN~~~g~~~~~PI~~~~~~~~~~~~~aly~~aDv~lvTslrDGmNLva~Eyva~q 396 (474)
T PF00982_consen 317 IAVPSREDVPEYQELRREVEELVGRINGKYGTPDWTPIIYIYRSLSFEELLALYRAADVALVTSLRDGMNLVAKEYVACQ 396 (474)
T ss_dssp E--B-STTSHHHHHHHHHHHHHHHHHHHHH-BTTB-SEEEE-S---HHHHHHHHHH-SEEEE--SSBS--HHHHHHHHHS
T ss_pred EeeccCccchhHHHHHHHHHHHHHHHHhhcccCCceeEEEEecCCCHHHHHHHHHhhhhEEecchhhccCCcceEEEEEe
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCCCCCCCCCCCceEEecCCcccccccC-CceeeCCCCHHHHHHHHHHHHcCCHHHHHHHHHHHhhhhhcCCHHH
Q 003025 457 QGVSGSESSSESSAPKKSMLVVSEFIGCSPSLS-GAIRVNPWNIEATAEAMHEAIQMNEAEKQLRHEKHYRYVSTHDVAY 535 (856)
Q Consensus 457 ~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~-~al~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~ 535 (856)
++ ++|+||+|||+||+++|. +|++|||||++++|+||.+||+|+++||+.|+++++++|.+||+.+
T Consensus 397 ~~-------------~~GvLiLSefaGaa~~L~~~al~VNP~d~~~~A~ai~~AL~M~~~Er~~r~~~~~~~v~~~~~~~ 463 (474)
T PF00982_consen 397 DD-------------NPGVLILSEFAGAAEQLSEAALLVNPWDIEEVADAIHEALTMPPEERKERHARLREYVREHDVQW 463 (474)
T ss_dssp -T-------------S--EEEEETTBGGGGT-TTS-EEE-TT-HHHHHHHHHHHHT--HHHHHHHHHHHHHHHHHT-HHH
T ss_pred cC-------------CCCceEeeccCCHHHHcCCccEEECCCChHHHHHHHHHHHcCCHHHHHHHHHHHHHHhHhCCHHH
Confidence 84 379999999999999997 6699999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHH
Q 003025 536 WARSFFQDMER 546 (856)
Q Consensus 536 W~~~~l~~l~~ 546 (856)
|+++|+++|++
T Consensus 464 W~~~~l~~L~~ 474 (474)
T PF00982_consen 464 WAESFLRDLKR 474 (474)
T ss_dssp HHHHHHHHHHT
T ss_pred HHHHHHHHhhC
Confidence 99999999974
|
These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 20 GT20 from CAZY comprises enzymes with only one known activity; alpha, alpha-trehalose-phosphate synthase [UDP-forming] (2.4.1.15 from EC). Synthesis of trehalose in the yeast Saccharomyces cerevisiae is catalysed by the trehalose-6-phosphate (Tre6P) synthase/phosphatase complex, which is composed of at least three different subunits encoded by the genes TPS1, TPS2, and TSL1. Tps1 and Tps2 carry the catalytic activities of trehalose synthesis, namely Tre6P synthase (Tps1) and Tre6P phosphatase (Tps2), while TsI1 has regulatory functions. There is some evidence that TsI1 and Tps3 may share a common function with respect to regulation and/or structural stabilisation of the Tre6P synthase/phosphatase complex in exponentially growing, heat-shocked cells []. OtsA (trehalose-6-phosphate synthase) from Escherichia coli has homology to the full-length TPS1, the N-terminal part of TPS2 and an internal region of TPS3 (TSL1) of yeast [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1UQU_A 2WTX_A 1UQT_B 1GZ5_B. |
| >COG0380 OtsA Trehalose-6-phosphate synthase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.2e-114 Score=961.85 Aligned_cols=466 Identities=38% Similarity=0.694 Sum_probs=432.8
Q ss_pred CCCCCeEEEEEcCCccceeecCCCCCeEEEecCCchHHhhhccCCCCCceEEEEccCCCCCcchhhhHHHhhccCeeEEE
Q 003025 57 SVAQDRVIIVANQLPVKAKRRPDNKGWSFSWDEDSLLLQLKDGLPEDMEVIYVGSLKVDVDLSEQDDVSQLLLDRFKCVP 136 (856)
Q Consensus 57 ~~~~~~~iivsnrlP~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~wvg~~~~~~~~~~~~~~~~~~~~~~~~~p 136 (856)
.....|+|+||||+|+...+..+++...+..+.|||+.+|++.+ ...+++|+||+|...++.+..........++...|
T Consensus 11 ~~~~~r~ivvsnR~p~~~~~~~~~~~~~~~~s~ggL~~~l~~~~-~~~~~~W~gw~G~~~~~~~~~~~~~~~~~~~~~~~ 89 (486)
T COG0380 11 PLEDSRLIVVSNRLPVKKTPEGDKGIEFGKRSAGGLVTALKPLL-RVDGGTWIGWSGTTGPTDESSDDLKERIGEFTSAP 89 (486)
T ss_pred cccCCcEEEEEccCCCcccccCCCcceeeccCCcchhhhcchhh-HhhcceEEecCceeccccccchhhhhccccceEEE
Confidence 45678999999999999876666677888999999999997644 45899999999987653332233333345899999
Q ss_pred eeCChhhhhhHhhccccccccccccccCCCCCCCCCCcChHhHHHHHHHHHHHHHHHHHHcCCCCCEEEEeCcccchHHH
Q 003025 137 AFLPPDILTKFYHGFCKQHLWPLFHYMLPFSATHGGRFDRSLWEAYVSANKIFSQRVIEVINPEDDYVWIHDYHLMVLPT 216 (856)
Q Consensus 137 v~l~~~~~~~~y~gf~~~~lWpl~H~~~~~~~~~~~~~~~~~w~~Y~~vN~~fa~~i~~~~~~~~D~VwihDyhl~llp~ 216 (856)
|+++.+++++||+||||++|||+|||+.+. ..|++.+|++|++||++|||+|++.++++ |+||||||||+|+|.
T Consensus 90 v~l~~~~~~~~Y~~fsn~iLWP~~Hy~~~~-----~~~~~~~w~~Y~~vN~~FAd~i~~~~~~g-DiIWVhDYhL~L~P~ 163 (486)
T COG0380 90 VILSDEDYEGYYNGFSNAILWPLFHYFIDD-----VAYERNWWDAYVKVNRKFADKIVEIYEPG-DIIWVHDYHLLLVPQ 163 (486)
T ss_pred EecCHHHHHHHHHHhhHhhhcceeeeecCc-----cccchHHHHHHHHHHHHHHHHHHHhcCCC-CEEEEEechhhhhHH
Confidence 999999999999999999999999999875 58999999999999999999999999985 999999999999999
Q ss_pred HHHhhcCCCeEEEEEccCCCChHHHhcCCchHHHHHHhHhCCEEcccCHHHHHHHHHHHHhhhCceecccCceeeEE---
Q 003025 217 FLRRRFTRLRMGFFLHSPFPSSEIYRTLPVREEILKALLNADLIGFHTFDYARHFLSCCSRMLGLEYQSKRGYIGLE--- 293 (856)
Q Consensus 217 ~lr~~~~~~~i~~flH~PfP~~e~~~~lp~r~eil~~ll~~dligf~t~~~~~~Fl~~~~r~lg~~~~~~~~~~~~~--- 293 (856)
|||++.|+++||||||+|||++|+|+|||+|+|||+|||+||+|||||++|++||++||+|+++.... ..+.
T Consensus 164 mlR~~~~~~~IgfFlHiPfPssEvfr~lP~r~eIl~gll~~dligFqt~~y~~nF~~~~~r~~~~~~~-----~~~~~~~ 238 (486)
T COG0380 164 MLRERIPDAKIGFFLHIPFPSSEVFRCLPWREEILEGLLGADLIGFQTESYARNFLDLCSRLLGVTGD-----ADIRFNG 238 (486)
T ss_pred HHHHhCCCceEEEEEeCCCCCHHHHhhCchHHHHHHHhhcCCeeEecCHHHHHHHHHHHHHhcccccc-----ccccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999986521 1233
Q ss_pred ECCEEEEEEEeecccCchHHHHHhcCchHHHHHHHHHHHcCC-CeEEEeccCccccCCHHHHHHHHHHHHHhCCCCcCce
Q 003025 294 YYGRTVGIKIMPVGIHMGQIESVLRLADKDWRVQELKQQFEG-KTVLLGVDDMDIFKGVDLKLLAMEHLLKQHPKWQGRA 372 (856)
Q Consensus 294 ~~gr~~~i~i~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~-k~iil~VdRld~~KGi~~~l~A~~~ll~~~p~~~~~v 372 (856)
++|+.+.+..+|+|||+..|......+.+..++.++++.+.+ +++|++|||+||+||+..+++||++||++||+|+||+
T Consensus 239 ~~~~~v~v~a~PIgID~~~~~~~~~~~~v~~~~~el~~~~~~~~kiivgvDRlDy~kGi~~rl~Afe~lL~~~Pe~~~kv 318 (486)
T COG0380 239 ADGRIVKVGAFPIGIDPEEFERALKSPSVQEKVLELKAELGRNKKLIVGVDRLDYSKGIPQRLLAFERLLEEYPEWRGKV 318 (486)
T ss_pred cCCceEEEEEEeeecCHHHHHHhhcCCchhhHHHHHHHHhcCCceEEEEehhcccccCcHHHHHHHHHHHHhChhhhCce
Confidence 448999999999999999999999999998899999999976 9999999999999999999999999999999999999
Q ss_pred EEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCcccEEEEcCCCCHHHHHHHHHhcceeeeccccccCCCcccce
Q 003025 373 VLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDKPVTLSERAAYYTIAECVVVTAVRDGMNLTPYEY 452 (856)
Q Consensus 373 vLvqi~~p~r~~~~~~~~l~~~~~~lv~~IN~~~~~~~~~pvv~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea 452 (856)
+|+||+.|+|++.++|+.++.+++++|++||++||+.+|+||+|+.++++.+++.+||++|||+++||+|||||||++||
T Consensus 319 vliQi~~pSr~~v~~y~~~~~~i~~~V~rIN~~fG~~~~~Pv~~l~~~~~~~~l~al~~~aDv~lVtplrDGMNLvakEy 398 (486)
T COG0380 319 VLLQIAPPSREDVEEYQALRLQIEELVGRINGEFGSLSWTPVHYLHRDLDRNELLALYRAADVMLVTPLRDGMNLVAKEY 398 (486)
T ss_pred EEEEecCCCccccHHHHHHHHHHHHHHHHHHhhcCCCCcceeEEEeccCCHHHHHHHHhhhceeeeccccccccHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeeecCCCCCCCCCCCCCCCCceEEecCCcccccccCCceeeCCCCHHHHHHHHHHHHcCCHHHHHHHHHHHhhhhhcCC
Q 003025 453 IVCRQGVSGSESSSESSAPKKSMLVVSEFIGCSPSLSGAIRVNPWNIEATAEAMHEAIQMNEAEKQLRHEKHYRYVSTHD 532 (856)
Q Consensus 453 ~a~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~~al~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~ 532 (856)
+||+.+ ++|+||+|||+||+.+|.+|++|||||.+++|+||++||+|+++||+.|++++++.|.+||
T Consensus 399 Va~q~~-------------~~G~LiLSeFaGaa~~L~~AliVNP~d~~~va~ai~~AL~m~~eEr~~r~~~~~~~v~~~d 465 (486)
T COG0380 399 VAAQRD-------------KPGVLILSEFAGAASELRDALIVNPWDTKEVADAIKRALTMSLEERKERHEKLLKQVLTHD 465 (486)
T ss_pred HHhhcC-------------CCCcEEEeccccchhhhccCEeECCCChHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhhh
Confidence 999873 4899999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHH
Q 003025 533 VAYWARSFFQDMERT 547 (856)
Q Consensus 533 ~~~W~~~~l~~l~~~ 547 (856)
+++|+++|+.+|.++
T Consensus 466 ~~~W~~~fl~~la~~ 480 (486)
T COG0380 466 VARWANSFLDDLAQA 480 (486)
T ss_pred HHHHHHHHHHHHHhc
Confidence 999999999999873
|
|
| >TIGR02400 trehalose_OtsA alpha,alpha-trehalose-phosphate synthase [UDP-forming] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-107 Score=933.66 Aligned_cols=454 Identities=38% Similarity=0.715 Sum_probs=423.4
Q ss_pred eEEEEEcCCccceeecCCCCCeEEEecCCchHHhhhccCCCCCceEEEEccCCCCCc-chhhhHHHhhccCeeEEEeeCC
Q 003025 62 RVIIVANQLPVKAKRRPDNKGWSFSWDEDSLLLQLKDGLPEDMEVIYVGSLKVDVDL-SEQDDVSQLLLDRFKCVPAFLP 140 (856)
Q Consensus 62 ~~iivsnrlP~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~wvg~~~~~~~~-~~~~~~~~~~~~~~~~~pv~l~ 140 (856)
|+||||||+|+.+.++ + ++++.|||+++|.+.+. ..+++||||+|...++ +++.++...+..+|+|+||||+
T Consensus 1 ~livvsnr~p~~~~~~---~---~~~~~gGl~~al~~~~~-~~~~~Wvgw~g~~~~~~~~~~~~~~~~~~~~~~~~v~l~ 73 (456)
T TIGR02400 1 RLIVVSNRLPVPITRG---G---LEPSAGGLAVALLGALK-ATGGVWFGWSGKTVEEDEGEPFLRTELEGKITLAPVFLS 73 (456)
T ss_pred CEEEEECCCCccccCC---C---CCcCCCCHHHHHHHHHh-ccCcEEEEeCCCCCCccchhhhHHHhhccCceEEEEECC
Confidence 6999999999988754 2 56778999999988665 4799999999976553 3334555556788999999999
Q ss_pred hhhhhhHhhccccccccccccccCCCCCCCCCCcChHhHHHHHHHHHHHHHHHHHHcCCCCCEEEEeCcccchHHHHHHh
Q 003025 141 PDILTKFYHGFCKQHLWPLFHYMLPFSATHGGRFDRSLWEAYVSANKIFSQRVIEVINPEDDYVWIHDYHLMVLPTFLRR 220 (856)
Q Consensus 141 ~~~~~~~y~gf~~~~lWpl~H~~~~~~~~~~~~~~~~~w~~Y~~vN~~fa~~i~~~~~~~~D~VwihDyhl~llp~~lr~ 220 (856)
+++++.||+||||++|||+|||+.+. .+|+++.|++|++||++||++|++.++| +|+|||||||||+||.+||+
T Consensus 74 ~~~~~~~y~gf~n~~lWPl~H~~~~~-----~~~~~~~w~~Y~~vN~~fA~~i~~~~~~-~d~vwvhDYhl~l~p~~lr~ 147 (456)
T TIGR02400 74 EEDVDGYYNGFSNSTLWPLFHYRPDL-----IRYDRKAWEAYRRVNRLFAEALAPLLQP-GDIVWVHDYHLMLLPAMLRE 147 (456)
T ss_pred HHHHHHHHHHhhhhhcchhhcccccc-----cccCHHHHHHHHHHHHHHHHHHHHhCCC-CCEEEEecchhhHHHHHHHh
Confidence 99999999999999999999998654 5899999999999999999999999998 49999999999999999999
Q ss_pred hcCCCeEEEEEccCCCChHHHhcCCchHHHHHHhHhCCEEcccCHHHHHHHHHHHHhhhCceecccCceeeEEECCEEEE
Q 003025 221 RFTRLRMGFFLHSPFPSSEIYRTLPVREEILKALLNADLIGFHTFDYARHFLSCCSRMLGLEYQSKRGYIGLEYYGRTVG 300 (856)
Q Consensus 221 ~~~~~~i~~flH~PfP~~e~~~~lp~r~eil~~ll~~dligf~t~~~~~~Fl~~~~r~lg~~~~~~~~~~~~~~~gr~~~ 300 (856)
+.|+++||||||||||++|+|++||+|++||+|||+||+|||||++|++||++||++++|+++... ++.+.|+.++
T Consensus 148 ~~~~~~igfFlHipfP~~e~f~~lp~r~~il~gll~~dligF~t~~~~~~Fl~~~~~~l~~~~~~~----~~~~~g~~~~ 223 (456)
T TIGR02400 148 LGVQNKIGFFLHIPFPSSEIYRTLPWRRELLEGLLAYDLVGFQTYDDARNFLSAVSRELGLETLPN----GVESGGRTVR 223 (456)
T ss_pred hCCCCeEEEEEeCCCCChHHHhhCCcHHHHHHHHhcCCEEEECCHHHHHHHHHHHHHHhCCcccCC----ceEECCcEEE
Confidence 999999999999999999999999999999999999999999999999999999999999976542 4678899999
Q ss_pred EEEeecccCchHHHHHhcCchHHHHHHHHHHHcCCCeEEEeccCccccCCHHHHHHHHHHHHHhCCCCcCceEEEEEecC
Q 003025 301 IKIMPVGIHMGQIESVLRLADKDWRVQELKQQFEGKTVLLGVDDMDIFKGVDLKLLAMEHLLKQHPKWQGRAVLVQIANP 380 (856)
Q Consensus 301 i~i~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~k~iil~VdRld~~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p 380 (856)
|.++|+|||++.|.+....+++.+...+++++++++++|++|||+|+.||+..+|+||++|++++|+++++++|+||+.|
T Consensus 224 v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~vIl~VgRLd~~KGi~~ll~A~~~ll~~~p~~~~~v~Lv~v~~p 303 (456)
T TIGR02400 224 VGAFPIGIDVDRFAEQAKKPSVQKRIAELRESLKGRKLIIGVDRLDYSKGLPERLLAFERFLEEHPEWRGKVVLVQIAVP 303 (456)
T ss_pred EEEecCcCCHHHHHHHhcChhHHHHHHHHHHHcCCCeEEEEccccccccCHHHHHHHHHHHHHhCccccCceEEEEEecC
Confidence 99999999999999888888888888889999999999999999999999999999999999999999999999999999
Q ss_pred CCCCchhHHHHHHHHHHHHHHHhcccCCCCcccEEEEcCCCCHHHHHHHHHhcceeeeccccccCCCcccceeeeecCCC
Q 003025 381 ARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDKPVTLSERAAYYTIAECVVVTAVRDGMNLTPYEYIVCRQGVS 460 (856)
Q Consensus 381 ~r~~~~~~~~l~~~~~~lv~~IN~~~~~~~~~pvv~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~a~~~~~~ 460 (856)
+|+++++|+++++++++++++||++||+.+|.|++++.+.++.+++.++|++|||||+||++||||||++|||||+.
T Consensus 304 ~rg~~~~~~~l~~~i~~lv~~in~~~~~~~~~pv~~l~~~~~~~el~aly~aaDv~vv~S~~EG~~Lv~lEamA~g~--- 380 (456)
T TIGR02400 304 SRGDVPEYQQLRRQVEELVGRINGRFGTLDWTPIRYLNRSYDREELMALYRAADVGLVTPLRDGMNLVAKEYVAAQD--- 380 (456)
T ss_pred CccCchHHHHHHHHHHHHHHHHHhccCCCCCccEEEEcCCCCHHHHHHHHHhCcEEEECccccccCccHHHHHHhcC---
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999987
Q ss_pred CCCCCCCCCCCCCceEEecCCcccccccCCceeeCCCCHHHHHHHHHHHHcCCHHHHHHHHHHHhhhhhcCCHHHHHHHH
Q 003025 461 GSESSSESSAPKKSMLVVSEFIGCSPSLSGAIRVNPWNIEATAEAMHEAIQMNEAEKQLRHEKHYRYVSTHDVAYWARSF 540 (856)
Q Consensus 461 ~~~~~~~~~~~~~g~lV~Se~~G~~~~l~~al~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~~ 540 (856)
++.|+||+|+++|+++++.+|++|||||++++|+||.++|+|+.+||+.|+++++++|.+||+.+|+++|
T Consensus 381 ----------P~~g~vVlS~~~G~~~~l~~gllVnP~d~~~lA~aI~~aL~~~~~er~~r~~~~~~~v~~~~~~~W~~~~ 450 (456)
T TIGR02400 381 ----------PKDGVLILSEFAGAAQELNGALLVNPYDIDGMADAIARALTMPLEEREERHRAMMDKLRKNDVQRWREDF 450 (456)
T ss_pred ----------CCCceEEEeCCCCChHHhCCcEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhhCCHHHHHHHH
Confidence 2358899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHH
Q 003025 541 FQDME 545 (856)
Q Consensus 541 l~~l~ 545 (856)
+.+|.
T Consensus 451 l~~l~ 455 (456)
T TIGR02400 451 LSDLN 455 (456)
T ss_pred HHHhh
Confidence 99885
|
This enzyme catalyzes the key, penultimate step in biosynthesis of trehalose, a compatible solute made as an osmoprotectant in some species in all three domains of life. The gene symbol OtsA stands for osmotically regulated trehalose synthesis A. Trehalose helps protect against both osmotic and thermal stresses, and is made from two glucose subunits. This model excludes glucosylglycerol-phosphate synthase, an enzyme of an analogous osmoprotectant system in many cyanobacterial strains. This model does not identify archaeal examples, as they are more divergent than glucosylglycerol-phosphate synthase. Sequences that score in the gray zone between the trusted and noise cutoffs include a number of yeast multidomain proteins in which the N-terminal domain may be functionally equivalent to this family. The gray zone also includes the OtsA of Cornyebacterium glutamicum (and related species), shown to be responsib |
| >cd03788 GT1_TPS Trehalose-6-Phosphate Synthase (TPS) is a glycosyltransferase that catalyses the synthesis of alpha,alpha-1,1-trehalose-6-phosphate from glucose-6-phosphate using a UDP-glucose donor | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.2e-98 Score=860.66 Aligned_cols=459 Identities=44% Similarity=0.800 Sum_probs=428.6
Q ss_pred eEEEEEcCCccceeecCCCCCeEEEecCCchHHhhhccCCCCCceEEEEccCCCCCcchhhhHHHhhccCeeEEEeeCCh
Q 003025 62 RVIIVANQLPVKAKRRPDNKGWSFSWDEDSLLLQLKDGLPEDMEVIYVGSLKVDVDLSEQDDVSQLLLDRFKCVPAFLPP 141 (856)
Q Consensus 62 ~~iivsnrlP~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~wvg~~~~~~~~~~~~~~~~~~~~~~~~~pv~l~~ 141 (856)
|+||||||+|+.++++++ |.|.++++.|||+.+|.+.+. ..+++||||++.+.+..+...+......+|+|+|||+++
T Consensus 1 ~li~vsnr~p~~~~~~~~-~~~~~~~~~ggl~~~l~~~~~-~~~~~wvg~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~ 78 (460)
T cd03788 1 RLVVVSNRLPVSIERDGD-GEFEARRSAGGLATALKGLLK-RTGGLWVGWSGIEEDEEEEDEVSTELLGEYTVAPVFLSP 78 (460)
T ss_pred CEEEEECCCCceeEEcCC-CceEeccCCCcHHHHHHHHHh-cCCeEEEEeCCCCCCcccchhhhhhhcCCceEEEeeCCH
Confidence 689999999999998764 689999999999999987554 579999999998776554444555668899999999999
Q ss_pred hhhhhHhhccccccccccccccCCCCCCCCCCcChHhHHHHHHHHHHHHHHHHHHcCCCCCEEEEeCcccchHHHHHHhh
Q 003025 142 DILTKFYHGFCKQHLWPLFHYMLPFSATHGGRFDRSLWEAYVSANKIFSQRVIEVINPEDDYVWIHDYHLMVLPTFLRRR 221 (856)
Q Consensus 142 ~~~~~~y~gf~~~~lWpl~H~~~~~~~~~~~~~~~~~w~~Y~~vN~~fa~~i~~~~~~~~D~VwihDyhl~llp~~lr~~ 221 (856)
++++.||+||||++|||+|||+.+. .+|++++|++|++||++||++|.+.++| +|+||||||||+++|.+||++
T Consensus 79 ~~~~~~y~~f~~~~LWp~~H~~~~~-----~~~~~~~w~~Y~~vN~~fa~~i~~~~~~-~d~iwihDyhl~llp~~lr~~ 152 (460)
T cd03788 79 EEFEGYYNGFSNEVLWPLFHYRLDL-----ARFDREDWEAYVRVNRKFADAIAEVLRP-GDLVWVHDYHLLLLPQMLRER 152 (460)
T ss_pred HHHHHHHHHhhhhhcchhhcCCCCc-----cccCHHHHHHHHHHHHHHHHHHHHhcCC-CCEEEEeChhhhHHHHHHHhh
Confidence 9999999999999999999999776 5899999999999999999999999997 499999999999999999999
Q ss_pred cCCCeEEEEEccCCCChHHHhcCCchHHHHHHhHhCCEEcccCHHHHHHHHHHHHhhhCceecccCceeeEEECCEEEEE
Q 003025 222 FTRLRMGFFLHSPFPSSEIYRTLPVREEILKALLNADLIGFHTFDYARHFLSCCSRMLGLEYQSKRGYIGLEYYGRTVGI 301 (856)
Q Consensus 222 ~~~~~i~~flH~PfP~~e~~~~lp~r~eil~~ll~~dligf~t~~~~~~Fl~~~~r~lg~~~~~~~~~~~~~~~gr~~~i 301 (856)
.++++||||||||||++|+|+++|+|++|+++||+||+|||||++|++||+++|+++++++.... ..+.++|+.++|
T Consensus 153 ~~~~~i~~f~HipfP~~e~~~~lp~~~~ll~~~l~~D~igF~t~~~~~~Fl~~~~~~l~~~~~~~---~~i~~~g~~~~i 229 (460)
T cd03788 153 GPDARIGFFLHIPFPSSEIFRCLPWREELLRGLLGADLIGFQTERYARNFLSCCSRLLGLEVTDD---GGVEYGGRRVRV 229 (460)
T ss_pred CCCCeEEEEEeCCCCChHHHhhCCChHHHHHHHhcCCEEEECCHHHHHHHHHHHHHHcCCcccCC---ceEEECCEEEEE
Confidence 99999999999999999999999999999999999999999999999999999999999886653 268899999999
Q ss_pred EEeecccCchHHHHHhcCchHHHHHHHHHHHcCCCeEEEeccCccccCCHHHHHHHHHHHHHhCCCCcCceEEEEEecCC
Q 003025 302 KIMPVGIHMGQIESVLRLADKDWRVQELKQQFEGKTVLLGVDDMDIFKGVDLKLLAMEHLLKQHPKWQGRAVLVQIANPA 381 (856)
Q Consensus 302 ~i~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~k~iil~VdRld~~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~ 381 (856)
.++|+|||++.|.+....++....+++++..++++++|++|||+++.||+..+|+||++|++++|+++++++|+|||.|+
T Consensus 230 ~vip~GID~~~f~~~~~~~~~~~~~~~~~~~~~~~~~il~vgRl~~~Kgi~~ll~A~~~ll~~~p~~~~~v~Lv~vg~~~ 309 (460)
T cd03788 230 GAFPIGIDPDAFRKLAASPEVQERAAELRERLGGRKLIVGVDRLDYSKGIPERLLAFERLLERYPEWRGKVVLVQIAVPS 309 (460)
T ss_pred EEEeCeEcHHHHHHHhcCchhHHHHHHHHHhcCCCEEEEEecCccccCCHHHHHHHHHHHHHhChhhcCCEEEEEEccCC
Confidence 99999999999998777676666677777878899999999999999999999999999999999999999999999999
Q ss_pred CCCchhHHHHHHHHHHHHHHHhcccCCCCcccEEEEcCCCCHHHHHHHHHhcceeeeccccccCCCcccceeeeecCCCC
Q 003025 382 RGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDKPVTLSERAAYYTIAECVVVTAVRDGMNLTPYEYIVCRQGVSG 461 (856)
Q Consensus 382 r~~~~~~~~l~~~~~~lv~~IN~~~~~~~~~pvv~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~a~~~~~~~ 461 (856)
|+++++++++++++++++++||.+||+.+|.||+++.+.++.+++.++|++|||||+||.+||||||++|||||+.
T Consensus 310 ~g~~~~~~~l~~~l~~~v~~in~~~g~~~~~~v~~~~g~v~~~el~~~y~~aDv~v~pS~~Eg~~lv~lEAma~g~---- 385 (460)
T cd03788 310 RTDVPEYQELRREVEELVGRINGKFGTLDWTPVRYLYRSLPREELAALYRAADVALVTPLRDGMNLVAKEYVACQD---- 385 (460)
T ss_pred CcCcHHHHHHHHHHHHHHHHHHhccCCCCceeEEEEeCCCCHHHHHHHHHhccEEEeCccccccCcccceeEEEec----
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999987
Q ss_pred CCCCCCCCCCCCceEEecCCcccccccCCceeeCCCCHHHHHHHHHHHHcCCHHHHHHHHHHHhhhhhcCCHHHHHHHHH
Q 003025 462 SESSSESSAPKKSMLVVSEFIGCSPSLSGAIRVNPWNIEATAEAMHEAIQMNEAEKQLRHEKHYRYVSTHDVAYWARSFF 541 (856)
Q Consensus 462 ~~~~~~~~~~~~g~lV~Se~~G~~~~l~~al~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~~l 541 (856)
+++|+||+|+++|+++.+.+|++|||+|++++|+||.++|+|+++|++.+++++++++.++|+..|+++|+
T Consensus 386 ---------p~~g~vV~S~~~G~~~~~~~g~lv~p~d~~~la~ai~~~l~~~~~e~~~~~~~~~~~v~~~~~~~w~~~~l 456 (460)
T cd03788 386 ---------DDPGVLILSEFAGAAEELSGALLVNPYDIDEVADAIHRALTMPLEERRERHRKLREYVRTHDVQAWANSFL 456 (460)
T ss_pred ---------CCCceEEEeccccchhhcCCCEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCCHHHHHHHHH
Confidence 34789999999999999888999999999999999999999999999999999999999999999999999
Q ss_pred HHH
Q 003025 542 QDM 544 (856)
Q Consensus 542 ~~l 544 (856)
.+|
T Consensus 457 ~~l 459 (460)
T cd03788 457 DDL 459 (460)
T ss_pred Hhh
Confidence 987
|
It is a key enzyme in the trehalose synthesis pathway. Trehalose is a nonreducing disaccharide present in a wide variety of organisms and may serve as a source of energy and carbon. It is characterized most notably in insect, plant, and microbial cells. Its production is often associated with a variety of stress conditions, including desiccation, dehydration, heat, cold, and oxidation. This family represents the catalytic domain of the TPS. Some members of this domain family coexist with a C-terminal trehalose phosphatase domain. |
| >TIGR02468 sucrsPsyn_pln sucrose phosphate synthase/possible sucrose phosphate phosphatase, plant | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-35 Score=353.01 Aligned_cols=543 Identities=14% Similarity=0.112 Sum_probs=328.6
Q ss_pred CEEEEeCcccchHHHHHHhhcCCCeEEEEEccCCCChHHHh-----------------cCCchHHH-HHHhHhCCEEccc
Q 003025 202 DYVWIHDYHLMVLPTFLRRRFTRLRMGFFLHSPFPSSEIYR-----------------TLPVREEI-LKALLNADLIGFH 263 (856)
Q Consensus 202 D~VwihDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~~~-----------------~lp~r~ei-l~~ll~~dligf~ 263 (856)
|+|+-|+++--.+...|++++ ++|..++.|+-= .+-++ .++.|-++ -..+-.||.|.-.
T Consensus 312 DvIHaHyw~sG~aa~~L~~~l-gVP~V~T~HSLg--r~K~~~ll~~g~~~~~~~~~~y~~~~Ri~~Ee~~l~~Ad~VIas 388 (1050)
T TIGR02468 312 YVIHGHYADAGDSAALLSGAL-NVPMVLTGHSLG--RDKLEQLLKQGRMSKEEINSTYKIMRRIEAEELSLDASEIVITS 388 (1050)
T ss_pred CEEEECcchHHHHHHHHHHhh-CCCEEEECccch--hhhhhhhcccccccccccccccchHHHHHHHHHHHHhcCEEEEe
Confidence 999999888777888887765 699999999631 11111 01222111 2346678998877
Q ss_pred CHHHHHHHHHHHH-------hhhCceecccCceeeEEECCE-EEEEEEeecccCchHHHHHhcCchH-------------
Q 003025 264 TFDYARHFLSCCS-------RMLGLEYQSKRGYIGLEYYGR-TVGIKIMPVGIHMGQIESVLRLADK------------- 322 (856)
Q Consensus 264 t~~~~~~Fl~~~~-------r~lg~~~~~~~~~~~~~~~gr-~~~i~i~p~GId~~~~~~~~~~~~~------------- 322 (856)
|......-...-. |.|.. ...+ ++..+|+ .-++.|+|+|||+.+|.+.......
T Consensus 389 T~qE~~eq~~lY~~~~~~~~~~~~~--~~~~---gv~~~g~~~~ri~VIPpGVD~~~F~P~~~~~~~~~~~~~~~~~~~~ 463 (1050)
T TIGR02468 389 TRQEIEEQWGLYDGFDVILERKLRA--RARR---GVSCYGRFMPRMAVIPPGMEFSHIVPHDGDMDGETEGNEEHPAKPD 463 (1050)
T ss_pred CHHHHHHHHHHhccCCchhhhhhhh--hhcc---cccccccCCCCeEEeCCCCcHHHccCCCccccchhccccccccccc
Confidence 7666553322100 11100 0112 2343443 2378899999999999863211100
Q ss_pred HHHHHHHHHHc--CCCeEEEeccCccccCCHHHHHHHHHHHHHhCCCCcCceEEEEEecCCCCCchhH----HHHHHHHH
Q 003025 323 DWRVQELKQQF--EGKTVLLGVDDMDIFKGVDLKLLAMEHLLKQHPKWQGRAVLVQIANPARGRGKDL----EEIQAEIH 396 (856)
Q Consensus 323 ~~~~~~l~~~~--~~k~iil~VdRld~~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~----~~l~~~~~ 396 (856)
.....+++..+ +++++||+|+|+++.||+..+|+||..+.+..+.. ++++ ++|... ..... .....++.
T Consensus 464 ~~~~~~l~r~~~~pdkpvIL~VGRL~p~KGi~~LIeAf~~L~~l~~~~--nL~L-IiG~gd--d~d~l~~~~~~~l~~L~ 538 (1050)
T TIGR02468 464 PPIWSEIMRFFTNPRKPMILALARPDPKKNITTLVKAFGECRPLRELA--NLTL-IMGNRD--DIDEMSSGSSSVLTSVL 538 (1050)
T ss_pred chhhHHHHhhcccCCCcEEEEEcCCccccCHHHHHHHHHHhHhhccCC--CEEE-EEecCc--hhhhhhccchHHHHHHH
Confidence 00112343333 57889999999999999999999999987543321 2333 345321 11110 12234555
Q ss_pred HHHHHHhcccCCCCcccEEEEcCCCCHHHHHHHHHhc----ceeeeccccccCCCcccceeeeecCCCCCCCCCCCCCCC
Q 003025 397 ATCKRINETFGRPGYEPVVFIDKPVTLSERAAYYTIA----ECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPK 472 (856)
Q Consensus 397 ~lv~~IN~~~~~~~~~pvv~~~~~v~~~el~aly~~A----Dv~vvtS~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~ 472 (856)
+++++. +....+.|.++++.+++.++|+.| ||||+||.+||||++++|||||+.
T Consensus 539 ~li~~l-------gL~g~V~FlG~v~~edvp~lYr~Ad~s~DVFV~PS~~EgFGLvlLEAMAcGl--------------- 596 (1050)
T TIGR02468 539 KLIDKY-------DLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGL--------------- 596 (1050)
T ss_pred HHHHHh-------CCCCeEEecCCCCHHHHHHHHHHhhhcCCeeeCCcccCCCCHHHHHHHHhCC---------------
Confidence 555553 334567788899999999999998 699999999999999999999955
Q ss_pred CceEEecCCcccccccC---CceeeCCCCHHHHHHHHHHHHcCCHHHHHHHHHHHhhhhhcCCHHHHHHHHHHHHHHHHH
Q 003025 473 KSMLVVSEFIGCSPSLS---GAIRVNPWNIEATAEAMHEAIQMNEAEKQLRHEKHYRYVSTHDVAYWARSFFQDMERTCK 549 (856)
Q Consensus 473 ~g~lV~Se~~G~~~~l~---~al~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~l~~~~~ 549 (856)
|||+|..+|+.+.+. +|++|+|.|++++|++|.++|+ +++.++...++.++.+..+++...++.+++.+.....
T Consensus 597 --PVVASdvGG~~EII~~g~nGlLVdP~D~eaLA~AL~~LL~-Dpelr~~m~~~gr~~v~~FSWe~ia~~yl~~i~~~~~ 673 (1050)
T TIGR02468 597 --PMVATKNGGPVDIHRVLDNGLLVDPHDQQAIADALLKLVA-DKQLWAECRQNGLKNIHLFSWPEHCKTYLSRIASCRP 673 (1050)
T ss_pred --CEEEeCCCCcHHHhccCCcEEEECCCCHHHHHHHHHHHhh-CHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHhc
Confidence 999999999998883 5999999999999999999997 4455555666778888899999999999988887654
Q ss_pred hhccccccc------c-----C--------cccceeEeecCc--cc-----ccCCH----HHHHHH--------------
Q 003025 550 DHFKRRCWG------I-----G--------LSFGFRVVALDP--NF-----RKLSI----DAIVSA-------------- 585 (856)
Q Consensus 550 ~~~~~~~~~------~-----g--------~g~~~~~~~~~~--~f-----~~l~~----~~i~~~-------------- 585 (856)
.+..-.... . + +.|++.+-.-.+ +. -.++. ..+..+
T Consensus 674 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 753 (1050)
T TIGR02468 674 RHPQWQRDTDDGEEASEDESPGDSLRDIQDISLNLSVDGDKESNNGSSNVEGSGPPADRVAKIENAVRSWSKSPKGSSAK 753 (1050)
T ss_pred cCcccccccccccccccccCccccccccccchhhccccccccccccccccccccchhhHHHHHHHHHhhccccccccccc
Confidence 431100000 0 1 011111100000 00 00000 001111
Q ss_pred ---------HH--cCCcEEEE--EecCCCCCCCCCCCCCCCHHHHHHHHHHHhhCCCeEEEecCCChhhHHHhhcC--CC
Q 003025 586 ---------YL--RSKSRAIL--FDYDGTVMPQTSINKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSP--CK 650 (856)
Q Consensus 586 ---------y~--~s~~rlI~--~DlDGTLl~~~~~~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~--~~ 650 (856)
|. +...++|+ +|+|+| .. ....-+++++++++-.....+.++++|||+..++...+.. +|
T Consensus 754 ~~~~~~~~~~~~~~~~~~~~via~D~d~~-~~----~~~~l~~~~~~~~~~~~~~~igfv~aTGR~l~~~~~~l~~~~lp 828 (1050)
T TIGR02468 754 AQQGSGAGKYPALRRRKRLFVIAVDCYDD-KD----LLQIIKNIFEAVRKERMEGSSGFILSTSMTISEIQSFLKSGGLN 828 (1050)
T ss_pred cccccccccCccccccceEEEEEeccCCC-CC----hHHHHHHHHHHHhccccCCceEEEEEcCCCHHHHHHHHHhCCCC
Confidence 11 11245666 999999 32 1112233333333201234478999999999999998854 33
Q ss_pred ---CccEEeeCCEEEEeCC-----CcceEec---CCCCcccHH-HHHHHHHHHHhhc--------CCcceEEecccc--e
Q 003025 651 ---KLGIAAEHGYFMRWSA-----DEEWQNC---GQSVDFGWI-QIAEPVMKLYTES--------TDGSYIEIKESA--L 708 (856)
Q Consensus 651 ---~lgliaenG~~I~~~~-----~~~w~~~---~~~~~~~w~-~~v~~i~~~~~~~--------~~Gs~ie~k~~~--l 708 (856)
...+||.-|..|+++. +..|..- ....+..|. +.+.+.+..+... .++...+..... .
T Consensus 829 ~~~PD~lI~~vGTeIyy~~~~~~~~~~~~~D~~w~~hI~~rW~ge~~r~~L~~l~~~~~~~~~~~~~~l~~Q~~~~q~~~ 908 (1050)
T TIGR02468 829 PTDFDALICNSGSELYYPSLNGSEEGKLVADQDYHSHIEYRWGGEGLRKTLVKWAASINEKKGENEEQIVEEDEESSTDH 908 (1050)
T ss_pred CCCCCEEEeCCCcceeccCcCCCCCCCceECHHHHHHHHccCCcHHHHHHHHHHhhhcccccccccccceecChhhCCCc
Confidence 2347899999998862 1112110 011234452 2344344333321 133344433322 3
Q ss_pred EEeeecCCCCCCchhHHHHHHHHHHHhcCCCeEEEEc-CeEEEEEeCCCCHHHHHHHHHHHhhhcCCCcceEEE-EeCCc
Q 003025 709 VWHHRDADPGFGSSQAKELLDHLESVLANEPAAVKSG-QFIVEVKPQGVSKGVVAEKIFTTMAESGRHADFVLC-IGDDR 786 (856)
Q Consensus 709 ~~~~~~~dp~~~~~~a~el~~~L~~~l~~~~~~v~~g-~~~vEI~p~gvsKG~al~~Ll~~l~~~gi~~d~vla-iGD~~ 786 (856)
...|.-.|+... ...+++.+.|+..--.. ..+++. ..+++|.|..+|||.|+++|+.++ |++++++++ +||+.
T Consensus 909 k~SY~v~d~~~~-~~v~elr~~Lr~~gLr~-~~iys~~~~~LDVlP~~ASKgqAlRyL~~rw---gi~l~~v~VfaGdSG 983 (1050)
T TIGR02468 909 CYAFKVKDPSKV-PPVKELRKLLRIQGLRC-HAVYCRNGTRLNVIPLLASRSQALRYLFVRW---GIELANMAVFVGESG 983 (1050)
T ss_pred eEEEEecCcccC-ccHHHHHHHHHhCCCce-EEEeecCCcEeeeeeCCCCHHHHHHHHHHHc---CCChHHeEEEeccCC
Confidence 333431233221 13566666665421111 233444 589999999999999999999999 999999955 99999
Q ss_pred h-hHHHH
Q 003025 787 S-DEDMF 792 (856)
Q Consensus 787 N-D~~Mf 792 (856)
| |+++|
T Consensus 984 ntD~e~L 990 (1050)
T TIGR02468 984 DTDYEGL 990 (1050)
T ss_pred CCCHHHH
Confidence 9 95544
|
Members of this family are sucrose-phosphate synthases of plants. This enzyme is known to exist in multigene families in several species of both monocots and dicots. The N-terminal domain is the glucosyltransferase domain. Members of this family also have a variable linker region and a C-terminal domain that resembles sucrose phosphate phosphatase (SPP) (EC 3.1.3.24) (see TIGR01485), the next and final enzyme of sucrose biosynthesis. The SPP-like domain likely serves a binding and not a catalytic function, as the reported SPP is always encoded by a distinct protein. |
| >COG1877 OtsB Trehalose-6-phosphatase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.2e-33 Score=291.11 Aligned_cols=249 Identities=31% Similarity=0.511 Sum_probs=215.5
Q ss_pred CHHHHHHHHHcCCcEEEEEecCCCCCCCCC--CCCCCCHHHHHHHHHHHhhCCCeEEEecCCChhhHHHhhcCCCCccEE
Q 003025 578 SIDAIVSAYLRSKSRAILFDYDGTVMPQTS--INKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSPCKKLGIA 655 (856)
Q Consensus 578 ~~~~i~~~y~~s~~rlI~~DlDGTLl~~~~--~~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~~~~lgli 655 (856)
....+.+.|..+++++|++||||||++... ....++++++++|++|+.+.++.|+|+|||+..+++.|++ +++++++
T Consensus 5 ~~~~~~~~~~~a~~~~~~lDyDGTl~~i~~~p~~a~~~~~l~~lL~~Las~~~~~v~iiSGR~~~~l~~~~~-v~~i~l~ 83 (266)
T COG1877 5 QSNQLLEPYLNARKRLLFLDYDGTLTEIVPHPEAAVPDDRLLSLLQDLASDPRNVVAIISGRSLAELERLFG-VPGIGLI 83 (266)
T ss_pred hhhhhccccccccceEEEEeccccccccccCccccCCCHHHHHHHHHHHhcCCCeEEEEeCCCHHHHHHhcC-CCCccEE
Confidence 345667788999999999999999998443 4556899999999999999999999999999999999998 7899999
Q ss_pred eeCCEEEEeCCCcceEecCCCCcccHHHHHHHHHHHHhhcCCcceEEecccceEEeeecCCCCCCchhHHHHHHHHHHHh
Q 003025 656 AEHGYFMRWSADEEWQNCGQSVDFGWIQIAEPVMKLYTESTDGSYIEIKESALVWHHRDADPGFGSSQAKELLDHLESVL 735 (856)
Q Consensus 656 aenG~~I~~~~~~~w~~~~~~~~~~w~~~v~~i~~~~~~~~~Gs~ie~k~~~l~~~~~~~dp~~~~~~a~el~~~L~~~l 735 (856)
|+||++++..++..|.......+..|++.+..++++|++++||+++|.|++.+.|||++++++....++.......
T Consensus 84 aehGa~~r~~~g~~~~~~~~~~~~~~~~~v~~~l~~~v~r~pGs~iE~K~~a~~~Hyr~a~~~~~~~~a~~~~~~~---- 159 (266)
T COG1877 84 AEHGAEVRDPNGKWWINLAEEADLRWLKEVAAILEYYVERTPGSYIERKGFAVALHYRNAEDDEGAALALAEAATL---- 159 (266)
T ss_pred EecceEEecCCCCeeEecCHHHHhhHHHHHHHHHHHHhhcCCCeEEEEcCcEEEEeeccCCchhhHHHHHHHHHhc----
Confidence 9999999988888888877777889999999999999999999999999999999999998775543333333222
Q ss_pred cCCC-eEEEEcCeEEEEEeCCCCHHHHHHHHHHHhhhcCCCcceEEEEeCCchhHHHHHHccccccCCCCCCCccEEEEE
Q 003025 736 ANEP-AAVKSGQFIVEVKPQGVSKGVVAEKIFTTMAESGRHADFVLCIGDDRSDEDMFEIIGNATSSGVLSSNASVFACT 814 (856)
Q Consensus 736 ~~~~-~~v~~g~~~vEI~p~gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~ 814 (856)
.+.. +.++.|+..||++|.++|||.+++++++.. ....++++|.|||.+|++||++++... ..+|.
T Consensus 160 ~~~~~~~v~~gk~vVEvrp~~~~KG~a~~~i~~~~---~~~~~~~~~aGDD~TDE~~F~~v~~~~----------~~~v~ 226 (266)
T COG1877 160 INELKLRVTPGKMVVELRPPGVSKGAAIKYIMDEL---PFDGRFPIFAGDDLTDEDAFAAVNKLD----------SITVK 226 (266)
T ss_pred cccccEEEEeCceEEEEeeCCcchHHHHHHHHhcC---CCCCCcceecCCCCccHHHHHhhccCC----------CceEE
Confidence 2223 889999999999999999999999999987 444468999999999999999998642 26899
Q ss_pred eCCCccccceEcCChhHHHHHHHHHHHhcC
Q 003025 815 VGQKPSKAKYYLDDAAEVVTMLEALAEASA 844 (856)
Q Consensus 815 vG~~~s~A~y~l~~~~eV~~~L~~L~~~~~ 844 (856)
+|...+.|++.+.+.......|.++.....
T Consensus 227 v~~~~t~a~~~~~~~~~~~~~l~~~~~~~~ 256 (266)
T COG1877 227 VGVGSTQAKFRLAGVYGFLRSLYKLLEALG 256 (266)
T ss_pred ecCCcccccccccccHHHHHHHHHHHHHhh
Confidence 999999999999999999999998887654
|
|
| >PF02358 Trehalose_PPase: Trehalose-phosphatase; InterPro: IPR003337 Trehalose-phosphatases 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-33 Score=294.90 Aligned_cols=227 Identities=37% Similarity=0.660 Sum_probs=154.9
Q ss_pred EEecCCCCCCCCC--CCCCCCHHHHHHHHHHHhhCCCeEEEecCCChhhHHHhhcCCCCccEEeeCCEEEEeCCCcceEe
Q 003025 595 LFDYDGTVMPQTS--INKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSPCKKLGIAAEHGYFMRWSADEEWQN 672 (856)
Q Consensus 595 ~~DlDGTLl~~~~--~~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~~~~lgliaenG~~I~~~~~~~w~~ 672 (856)
|+||||||.+..+ ....+++++.++|++||+++++.|+|+|||+...+ ..+..+++++++++||++++.+++..|..
T Consensus 1 ~lDyDGTL~p~~~~p~~~~~~~~~~~~L~~La~~~~~~v~IvSGR~~~~~-~~~~~~~~i~l~gehG~e~~~~~~~~~~~ 79 (235)
T PF02358_consen 1 FLDYDGTLAPIVDDPDAAVPPPELRELLRALAADPNNTVAIVSGRSLDDL-ERFGGIPNIGLAGEHGAEIRRPGGSEWTN 79 (235)
T ss_dssp EEE-TTTSS---S-GGG----HHHHHHHHHHHHHSE--EEEE-SS-HHHH-HHH-S-SS-EEEEGGGTEEEETTE-EEE-
T ss_pred CcccCCccCCCCCCccccCCCHHHHHHHHHHhccCCCEEEEEEeCCHHHh-HHhcCCCCceEEEEeeEEeccCccccccc
Confidence 7999999999554 34578899999999999999999999999999994 44446789999999999999999888887
Q ss_pred cCCCCcccHHHHHHHHHHHHhhcCCcceEEecccceEEeeecCCCCCCchhHHHHHHHHHHHhcCC-CeEEEEcCeEEEE
Q 003025 673 CGQSVDFGWIQIAEPVMKLYTESTDGSYIEIKESALVWHHRDADPGFGSSQAKELLDHLESVLANE-PAAVKSGQFIVEV 751 (856)
Q Consensus 673 ~~~~~~~~w~~~v~~i~~~~~~~~~Gs~ie~k~~~l~~~~~~~dp~~~~~~a~el~~~L~~~l~~~-~~~v~~g~~~vEI 751 (856)
........|++.+.++++.+.++++|+++|.|++++.|||++++++++..++.++.+++.+.+... ++.+..|+.++||
T Consensus 80 ~~~~~~~~~~~~~~~~l~~~~~~~pG~~iE~K~~sv~~Hyr~~~~~~~~~~~~~l~~~l~~~~~~~~~~~v~~g~~~vEv 159 (235)
T PF02358_consen 80 LPADEDLEWKDEVREILEYFAERTPGSFIEDKEFSVAFHYRNAPPEFGEAQARELAEQLREILASHPGLEVVPGKKVVEV 159 (235)
T ss_dssp TTGGGGHHHHHHHHHHHTTHHHHSTT-EEEEETTEEEEE-TTS-ST----THHHHHHHHHHHHHHH-T-EEEE-SSEEEE
T ss_pred cccccchHHHHHHHHHHHHHHhhccCcEEEECCeEEEEEecCCCcchhhhHHHHHHHHHHHHHHhCCCEEEEECCCEEEE
Confidence 555667789999999999999999999999999999999999999999899999999999877765 7999999999999
Q ss_pred EeCCCCHHHHHHHHHHHhhhcCCCcceEEEEeCCchhHHHHHHccccccCCCCCCCccEEEEEeC-----CCccccceEc
Q 003025 752 KPQGVSKGVVAEKIFTTMAESGRHADFVLCIGDDRSDEDMFEIIGNATSSGVLSSNASVFACTVG-----QKPSKAKYYL 826 (856)
Q Consensus 752 ~p~gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG-----~~~s~A~y~l 826 (856)
+|.+++||.|+++|++.+...+..+++++|+|||.+||+||++++... ..-+++.|| .++|.|+|+|
T Consensus 160 rp~~~~KG~av~~ll~~~~~~~~~~~~~l~~GDD~tDE~~f~~~~~~~--------~~~~~i~V~~~~~~~~~t~A~y~l 231 (235)
T PF02358_consen 160 RPPGVNKGSAVRRLLEELPFAGPKPDFVLYIGDDRTDEDAFRALRELE--------EGGFGIKVGSVSVGEKPTAASYRL 231 (235)
T ss_dssp E-TT--HHHHHHHHHTTS---------EEEEESSHHHHHHHHTTTTS------------EEEEES---------------
T ss_pred EeCCCChHHHHHHHHHhcCccccccceeEEecCCCCCHHHHHHHHhcc--------cCCCCeEEEeeccccccccccccc
Confidence 999999999999999988322334789999999999999999998631 011455555 4679999999
Q ss_pred CChh
Q 003025 827 DDAA 830 (856)
Q Consensus 827 ~~~~ 830 (856)
+|+.
T Consensus 232 ~~p~ 235 (235)
T PF02358_consen 232 DDPS 235 (235)
T ss_dssp ----
T ss_pred ccCC
Confidence 9873
|
1.3.12 from EC catalyse the de-phosphorylation of trehalose-6-phosphate to trehalose and orthophosphate. Trehalose is a common disaccharide of bacteria, fungi and invertebrates that appears to play a major role in desiccation tolerance. A pathway for trehalose biosynthesis may also exist in plants []. The trehalose-phosphatase signature is found in the C terminus of trehalose-6-phosphate synthase 2.4.1.15 from EC adjacent to the trehalose-6-phosphate synthase domain (see IPR001830 from INTERPRO). It would appear that the two equivalent genes in the Escherichia coli otsBA operon: otsA, the trehalose-6-phosphate synthase and otsB, trehalose-phosphatase (this family) have undergone gene fusion in most eukaryotes [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1U02_A. |
| >TIGR00685 T6PP trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.2e-32 Score=286.66 Aligned_cols=237 Identities=29% Similarity=0.432 Sum_probs=196.4
Q ss_pred CCcEEEEEecCCCCCCCCC--CCCCCCHHHHHHHHHHHhhCCCeEEEecCCChhhHHHhhcCCCCccEEeeCCEEEEeCC
Q 003025 589 SKSRAILFDYDGTVMPQTS--INKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSPCKKLGIAAEHGYFMRWSA 666 (856)
Q Consensus 589 s~~rlI~~DlDGTLl~~~~--~~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~~~~lgliaenG~~I~~~~ 666 (856)
+++++|+|||||||++..+ ....+++++.++|++|++++++.|+|+|||+..++...+ .+++++++++||++++.++
T Consensus 1 ~~~~~l~lD~DGTL~~~~~~p~~~~~~~~~~~~L~~L~~~~~~~v~ivSGR~~~~~~~~~-~~~~~~l~g~hG~~~~~~g 79 (244)
T TIGR00685 1 ARKRAFFFDYDGTLSEIVPDPDAAVVSDRLLTILQKLAARPHNAIWIISGRKFLEKWLGV-KLPGLGLAGEHGCEMKDNG 79 (244)
T ss_pred CCcEEEEEecCccccCCcCCCcccCCCHHHHHHHHHHHhCCCCeEEEEECCChhhccccC-CCCceeEEeecCEEEecCC
Confidence 4689999999999998432 345678999999999999999999999999998887765 3478999999999998744
Q ss_pred Cc-ceEecCCCCcccHHHHHHHHHHHHhhcCCcceEEecccceEEeeecC-CCCCCchhHHHHHHHHHHHhcCCCeEEEE
Q 003025 667 DE-EWQNCGQSVDFGWIQIAEPVMKLYTESTDGSYIEIKESALVWHHRDA-DPGFGSSQAKELLDHLESVLANEPAAVKS 744 (856)
Q Consensus 667 ~~-~w~~~~~~~~~~w~~~v~~i~~~~~~~~~Gs~ie~k~~~l~~~~~~~-dp~~~~~~a~el~~~L~~~l~~~~~~v~~ 744 (856)
.. .|... ......|++.+.++.+++.++ ||+++|.|+.+++|||+.+ +++++..++.++..++. ...++.+..
T Consensus 80 ~~~~~~~~-~~~~~~~~~~~~~l~~~~~~~-pG~~iE~K~~s~~~hyr~a~d~~~~~~~~~~~~~~~~---~~~~~~v~~ 154 (244)
T TIGR00685 80 SCQDWVNL-TEKIPSWKVRANELREEITTR-PGVFIERKGVALAWHYRQAPVPELARFRAKELKEKIL---SFTDLEVMD 154 (244)
T ss_pred Ccceeeec-hhhhhhHHHHHHHHHHHHhcC-CCcEEEecceEEEEEeccCCCcHHHHHHHHHHHHHHh---cCCCEEEEE
Confidence 33 45543 222247888888888888887 9999999999999999998 77777667777776653 334688899
Q ss_pred cCeEEEEEeCCCCHHHHHHHHHHHhhhcCCCcceEEEEeCCchhHHHHHHccccccCCCCCCCccEEEEEe--CCCcccc
Q 003025 745 GQFIVEVKPQGVSKGVVAEKIFTTMAESGRHADFVLCIGDDRSDEDMFEIIGNATSSGVLSSNASVFACTV--GQKPSKA 822 (856)
Q Consensus 745 g~~~vEI~p~gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~v--G~~~s~A 822 (856)
++.++|++|.++|||.+++.+++++ ++.++++++|||+.||++||+.+.... .....++|+| |..++.|
T Consensus 155 g~~~~e~~p~~~~Kg~a~~~~~~~~---~~~~~~~i~iGD~~~D~~~~~~~~~~~------~~~g~~~v~v~~g~~~~~A 225 (244)
T TIGR00685 155 GKAVVELKPRFVNKGEIVKRLLWHQ---PGSGISPVYLGDDITDEDAFRVVNNQW------GNYGFYPVPIGSGSKKTVA 225 (244)
T ss_pred CCeEEEEeeCCCCHHHHHHHHHHhc---ccCCCceEEEcCCCcHHHHHHHHhccc------CCCCeEEEEEecCCcCCCc
Confidence 9999999999999999999999999 888899999999999999999993210 0112478888 8889999
Q ss_pred ceEcCChhHHHHHHHHHH
Q 003025 823 KYYLDDAAEVVTMLEALA 840 (856)
Q Consensus 823 ~y~l~~~~eV~~~L~~L~ 840 (856)
+|+++++++|.++|+.|+
T Consensus 226 ~~~~~~~~~v~~~L~~l~ 243 (244)
T TIGR00685 226 KFHLTGPQQVLEFLGLLV 243 (244)
T ss_pred eEeCCCHHHHHHHHHHHh
Confidence 999999999999999886
|
At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes. |
| >PRK10187 trehalose-6-phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-31 Score=287.63 Aligned_cols=232 Identities=21% Similarity=0.262 Sum_probs=186.9
Q ss_pred cEEEEEecCCCCCCCCC--CCCCCCHHHHHHHHHHHhhCCCeEEEecCCChhhHHHhhcCCCCccEEeeCCEEEEeCCCc
Q 003025 591 SRAILFDYDGTVMPQTS--INKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSPCKKLGIAAEHGYFMRWSADE 668 (856)
Q Consensus 591 ~rlI~~DlDGTLl~~~~--~~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~~~~lgliaenG~~I~~~~~~ 668 (856)
.++|++||||||++..+ ....++++++++|++|++++|+.|+|+|||+...+.++++.+ .+.++++||++++..++.
T Consensus 14 ~~li~~D~DGTLl~~~~~p~~~~i~~~~~~~L~~L~~~~g~~v~i~SGR~~~~~~~~~~~~-~~~~i~~nGa~i~~~~~~ 92 (266)
T PRK10187 14 NYAWFFDLDGTLAEIKPHPDQVVVPDNILQGLQLLATANDGALALISGRSMVELDALAKPY-RFPLAGVHGAERRDINGK 92 (266)
T ss_pred CEEEEEecCCCCCCCCCCcccccCCHHHHHHHHHHHhCCCCcEEEEeCCCHHHHHHhcCcc-cceEEEeCCCeeecCCCC
Confidence 68999999999998322 356889999999999966689999999999999999999765 467999999999866543
Q ss_pred ceEecCCCCcccHHHHHHHHHHHHhhcCCcceEEecccceEEeeecCCCCCCchhHHHHHHHHHHHhc-CC-CeEEEEcC
Q 003025 669 EWQNCGQSVDFGWIQIAEPVMKLYTESTDGSYIEIKESALVWHHRDADPGFGSSQAKELLDHLESVLA-NE-PAAVKSGQ 746 (856)
Q Consensus 669 ~w~~~~~~~~~~w~~~v~~i~~~~~~~~~Gs~ie~k~~~l~~~~~~~dp~~~~~~a~el~~~L~~~l~-~~-~~~v~~g~ 746 (856)
.+.. ..+.+|...+...++.+.++++|+++|.|+..+.+||+.++ + ..+.+..+.+.+. .. ...+.+++
T Consensus 93 ~~~~---~l~~~~~~~i~~~l~~~~~~~pg~~ve~k~~~~~~h~r~~~-~-----~~~~~~~l~~~i~~~~~~~~~~~g~ 163 (266)
T PRK10187 93 THIV---HLPDAIARDISVQLHTALAQLPGAELEAKGMAFALHYRQAP-Q-----HEDALLALAQRITQIWPQLALQPGK 163 (266)
T ss_pred eeec---cCChhHHHHHHHHHHHHhccCCCcEEEeCCcEEEEECCCCC-c-----cHHHHHHHHHHHHhhCCceEEeCCC
Confidence 2222 23345555556666677888999999999999999998763 2 1233333332222 22 36777899
Q ss_pred eEEEEEeCCCCHHHHHHHHHHHhhhcCCCcceEEEEeCCchhHHHHHHccccccCCCCCCCccEEEEEeCCCccccceEc
Q 003025 747 FIVEVKPQGVSKGVVAEKIFTTMAESGRHADFVLCIGDDRSDEDMFEIIGNATSSGVLSSNASVFACTVGQKPSKAKYYL 826 (856)
Q Consensus 747 ~~vEI~p~gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~~s~A~y~l 826 (856)
.++||+|.++|||.|++++++++ |+..+++++|||+.||++||+++... ..++|+||++.+.|+|++
T Consensus 164 ~~lEi~p~g~~Kg~al~~ll~~~---~~~~~~v~~~GD~~nD~~mf~~~~~~----------~g~~vavg~a~~~A~~~l 230 (266)
T PRK10187 164 CVVEIKPRGTNKGEAIAAFMQEA---PFAGRTPVFVGDDLTDEAGFAVVNRL----------GGISVKVGTGATQASWRL 230 (266)
T ss_pred EEEEeeCCCCCHHHHHHHHHHhc---CCCCCeEEEEcCCccHHHHHHHHHhc----------CCeEEEECCCCCcCeEeC
Confidence 99999999999999999999999 99999999999999999999999421 117899999999999999
Q ss_pred CChhHHHHHHHHHHHhcCC
Q 003025 827 DDAAEVVTMLEALAEASAP 845 (856)
Q Consensus 827 ~~~~eV~~~L~~L~~~~~~ 845 (856)
+++++|..+|+.|++....
T Consensus 231 ~~~~~v~~~L~~l~~~~~~ 249 (266)
T PRK10187 231 AGVPDVWSWLEMITTAQQQ 249 (266)
T ss_pred CCHHHHHHHHHHHHHhhhc
Confidence 9999999999999976553
|
|
| >PLN03017 trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-31 Score=288.22 Aligned_cols=243 Identities=26% Similarity=0.344 Sum_probs=193.8
Q ss_pred HHcCCcEEEEEecCCCCCCCCC-CCC-CCCHHHHHHHHHHHhhCCCeEEEecCCChhhHHHhhcCCCCccEEeeCCEEEE
Q 003025 586 YLRSKSRAILFDYDGTVMPQTS-INK-APSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSPCKKLGIAAEHGYFMR 663 (856)
Q Consensus 586 y~~s~~rlI~~DlDGTLl~~~~-~~~-~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~~~~lgliaenG~~I~ 663 (856)
+-+.+..+||+||||||++... .++ .+++++.++|++|+ +++.|+|+|||++..+.++++ +.+++++++||++++
T Consensus 106 ~~~~k~~llflD~DGTL~Piv~~p~~a~i~~~~~~aL~~La--~~~~vaIvSGR~~~~l~~~~~-l~~l~l~g~hGa~i~ 182 (366)
T PLN03017 106 ASRGKQIVMFLDYDGTLSPIVDDPDKAFMSSKMRRTVKKLA--KCFPTAIVTGRCIDKVYNFVK-LAELYYAGSHGMDIK 182 (366)
T ss_pred HhcCCCeEEEEecCCcCcCCcCCcccccCCHHHHHHHHHHh--cCCcEEEEeCCCHHHHHHhhc-ccCceEEEcCCcEEe
Confidence 3455789999999999996543 233 79999999999995 578999999999999999974 367899999999998
Q ss_pred eCCCcceEe------cCCCCcccHHHHHHHH---HHHHhhcCCcceEEecccceEEeeecCCCCCCchhHHHHHHHHHHH
Q 003025 664 WSADEEWQN------CGQSVDFGWIQIAEPV---MKLYTESTDGSYIEIKESALVWHHRDADPGFGSSQAKELLDHLESV 734 (856)
Q Consensus 664 ~~~~~~w~~------~~~~~~~~w~~~v~~i---~~~~~~~~~Gs~ie~k~~~l~~~~~~~dp~~~~~~a~el~~~L~~~ 734 (856)
.+++..+.. ........|...+.++ +..+++++||+++|.|.++++|||+.++++ .+.++..++...
T Consensus 183 ~p~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~L~~~~~~~pGa~VE~K~~~vavHyR~ad~~----~~~~l~~~~~~v 258 (366)
T PLN03017 183 GPAKGFSRHKRVKQSLLYQPANDYLPMIDEVYRQLLEKTKSTPGAKVENHKFCASVHFRCVDEK----KWSELVLQVRSV 258 (366)
T ss_pred cCCCcceeccccccccccccchhhHHHHHHHHHHHHHHHhcCCCCEEEecCcEEEEEcCcCCHH----HHHHHHHHHHHH
Confidence 765422110 1111233476666665 556778899999999999999999999764 246777888877
Q ss_pred hcCCC-eEEEEcCeEEEEEeC-CCCHHHHHHHHHHHhhhcCCCcceEEEEeCCchhHHHHHHccccccCCCCCCCccEEE
Q 003025 735 LANEP-AAVKSGQFIVEVKPQ-GVSKGVVAEKIFTTMAESGRHADFVLCIGDDRSDEDMFEIIGNATSSGVLSSNASVFA 812 (856)
Q Consensus 735 l~~~~-~~v~~g~~~vEI~p~-gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~a 812 (856)
+.+.+ +.+..|+..+||+|. ++|||.|+++|++.+...+-..++++|||||.+||+||+.+.... .-|+
T Consensus 259 l~~~~~l~v~~GkkVlEvRP~~~~dKG~Av~~LL~~l~~~~~~~~~pvyiGDD~TDEDaF~~L~~~~---------~G~g 329 (366)
T PLN03017 259 LKNFPTLKLTQGRKVFEIRPMIEWDKGKALEFLLESLGFGNTNNVFPVYIGDDRTDEDAFKMLRDRG---------EGFG 329 (366)
T ss_pred HHhCCCcEEeCCCeEEEecCCCCCCHHHHHHHHHHhcccccCCCceEEEeCCCCccHHHHHHHhhcC---------CceE
Confidence 77766 789999999999995 999999999999988222222568999999999999999996421 1289
Q ss_pred EEeC--CCccccceEcCChhHHHHHHHHHHHhcC
Q 003025 813 CTVG--QKPSKAKYYLDDAAEVVTMLEALAEASA 844 (856)
Q Consensus 813 v~vG--~~~s~A~y~l~~~~eV~~~L~~L~~~~~ 844 (856)
|.|| .++|.|+|+|+++++|.++|+.|+.-..
T Consensus 330 I~VG~~~k~T~A~y~L~dp~eV~~fL~~L~~~~~ 363 (366)
T PLN03017 330 ILVSKFPKDTDASYSLQDPSEVMDFLARLVEWKQ 363 (366)
T ss_pred EEECCCCCCCcceEeCCCHHHHHHHHHHHHHHHh
Confidence 9999 4789999999999999999999986543
|
|
| >PLN02580 trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.2e-31 Score=290.54 Aligned_cols=241 Identities=26% Similarity=0.367 Sum_probs=188.4
Q ss_pred HHHHcCCcEEEEEecCCCCCCCCC--CCCCCCHHHHHHHHHHHhhCCCeEEEecCCChhhHHHhhcCCCCccEEeeCCEE
Q 003025 584 SAYLRSKSRAILFDYDGTVMPQTS--INKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSPCKKLGIAAEHGYF 661 (856)
Q Consensus 584 ~~y~~s~~rlI~~DlDGTLl~~~~--~~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~~~~lgliaenG~~ 661 (856)
.+|.+++.+++|+||||||.+... ....+++++.++|++|+++ ..|+|+|||++..+.++++. +.++++++||++
T Consensus 112 ~~~~~~k~~~LfLDyDGTLaPIv~~Pd~A~~s~~~~~aL~~La~~--~~VAIVSGR~~~~L~~~l~~-~~l~laGsHG~e 188 (384)
T PLN02580 112 ANFAKGKKIALFLDYDGTLSPIVDDPDRALMSDAMRSAVKNVAKY--FPTAIISGRSRDKVYELVGL-TELYYAGSHGMD 188 (384)
T ss_pred HHHhhcCCeEEEEecCCccCCCCCCcccccCCHHHHHHHHHHhhC--CCEEEEeCCCHHHHHHHhCC-CCccEEEeCCce
Confidence 378999999999999999998543 4556899999999999776 47999999999999999974 579999999999
Q ss_pred EEeCCC----cceEecC------------CCCcccHHHHHHHHHHH---HhhcCCcceEEecccceEEeeecCCCCCCch
Q 003025 662 MRWSAD----EEWQNCG------------QSVDFGWIQIAEPVMKL---YTESTDGSYIEIKESALVWHHRDADPGFGSS 722 (856)
Q Consensus 662 I~~~~~----~~w~~~~------------~~~~~~w~~~v~~i~~~---~~~~~~Gs~ie~k~~~l~~~~~~~dp~~~~~ 722 (856)
++.+.+ ..|.... ......|...+.++++. ++++++|+++|.|.++++||||.+++++...
T Consensus 189 ~~~p~~~~~~~~~~~~~~~~~~~g~~~~~~~~a~~~~~~i~~v~~~l~e~~~~~pGs~VE~K~~svavHYR~a~~~~~~~ 268 (384)
T PLN02580 189 IMGPVRESVSNDHPNCIKSTDQQGKEVNLFQPASEFLPMIDEVFRSLVESTKDIKGAKVENHKFCVSVHYRNVDEKNWPL 268 (384)
T ss_pred eecCCCCcccccccccccccccccccccccccchhhhhhHHHHHHHHHHHhccCCCCEEEecCcEEEEEeCCCCchHHHH
Confidence 986422 1232211 01134577666665554 5667799999999999999999998776544
Q ss_pred hHHHHHHHHHHHhcCCC-eEEEEcCeEEEEEe-CCCCHHHHHHHHHHHhhhcCCCcc-e--EEEEeCCchhHHHHHHccc
Q 003025 723 QAKELLDHLESVLANEP-AAVKSGQFIVEVKP-QGVSKGVVAEKIFTTMAESGRHAD-F--VLCIGDDRSDEDMFEIIGN 797 (856)
Q Consensus 723 ~a~el~~~L~~~l~~~~-~~v~~g~~~vEI~p-~gvsKG~al~~Ll~~l~~~gi~~d-~--vlaiGD~~ND~~Mf~~ag~ 797 (856)
++.++.+ .+.+.+ +.+..|+.++||+| .++|||.|+++|++++ ++..+ + ++||||+.||++||+.+..
T Consensus 269 ~~~~l~~----~l~~~~~l~v~~Gk~vlEVrP~~g~~KG~Av~~Ll~~~---g~~~~d~~~pi~iGDD~TDedmF~~L~~ 341 (384)
T PLN02580 269 VAQCVHD----VLKKYPRLRLTHGRKVLEVRPVIDWNKGKAVEFLLESL---GLSNCDDVLPIYIGDDRTDEDAFKVLRE 341 (384)
T ss_pred HHHHHHH----HHHhCCceEEEeCCeEEEEecCCCCCHHHHHHHHHHhc---CCCcccceeEEEECCCchHHHHHHhhhc
Confidence 4444444 334444 78889999999999 5999999999999998 77654 3 4999999999999999753
Q ss_pred cccCCCCCCCccEEEEEeC--CCccccceEcCChhHHHHHHHHHHHhc
Q 003025 798 ATSSGVLSSNASVFACTVG--QKPSKAKYYLDDAAEVVTMLEALAEAS 843 (856)
Q Consensus 798 ~~~~~~~~~~~~~~av~vG--~~~s~A~y~l~~~~eV~~~L~~L~~~~ 843 (856)
... -++|+|| .+.+.|+|+|+++++|.++|+.|+.-.
T Consensus 342 ~~~---------G~~I~Vgn~~~~t~A~y~L~dp~eV~~~L~~L~~~~ 380 (384)
T PLN02580 342 GNR---------GYGILVSSVPKESNAFYSLRDPSEVMEFLKSLVTWK 380 (384)
T ss_pred cCC---------ceEEEEecCCCCccceEEcCCHHHHHHHHHHHHHhh
Confidence 210 1456665 578999999999999999999998643
|
|
| >PLN02151 trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=99.98 E-value=5.9e-31 Score=286.01 Aligned_cols=240 Identities=25% Similarity=0.370 Sum_probs=193.1
Q ss_pred HcCCcEEEEEecCCCCCCCCC--CCCCCCHHHHHHHHHHHhhCCCeEEEecCCChhhHHHhhcCCCCccEEeeCCEEEEe
Q 003025 587 LRSKSRAILFDYDGTVMPQTS--INKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSPCKKLGIAAEHGYFMRW 664 (856)
Q Consensus 587 ~~s~~rlI~~DlDGTLl~~~~--~~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~~~~lgliaenG~~I~~ 664 (856)
.+++..+||+||||||++... ....++++++++|++|+. +..|+|+|||+...+.++++ +++++++++||++++.
T Consensus 94 ~~~~~~ll~lDyDGTL~PIv~~P~~A~~~~~~~~aL~~La~--~~~vaIvSGR~~~~l~~~~~-~~~l~laGsHG~e~~~ 170 (354)
T PLN02151 94 SEGKQIVMFLDYDGTLSPIVDDPDRAFMSKKMRNTVRKLAK--CFPTAIVSGRCREKVSSFVK-LTELYYAGSHGMDIKG 170 (354)
T ss_pred hcCCceEEEEecCccCCCCCCCcccccCCHHHHHHHHHHhc--CCCEEEEECCCHHHHHHHcC-CccceEEEeCCceeec
Confidence 456789999999999997543 344789999999999974 57999999999999999996 4679999999999987
Q ss_pred CC-CcceEe----cCCCCcccHHHHHHHHHHHH---hhcCCcceEEecccceEEeeecCCCCCCchhHHHHHHHHHHHhc
Q 003025 665 SA-DEEWQN----CGQSVDFGWIQIAEPVMKLY---TESTDGSYIEIKESALVWHHRDADPGFGSSQAKELLDHLESVLA 736 (856)
Q Consensus 665 ~~-~~~w~~----~~~~~~~~w~~~v~~i~~~~---~~~~~Gs~ie~k~~~l~~~~~~~dp~~~~~~a~el~~~L~~~l~ 736 (856)
++ +..|+. ........|...+.++++.+ ++++||+++|.|.++++|||+.++++ +..++.+++.+.+.
T Consensus 171 p~~g~~~~~~~~~~~~~~~~~~~~~i~~v~~~l~~~~~~~pG~~VE~K~~slavHYR~a~~~----~~~~l~~~l~~v~~ 246 (354)
T PLN02151 171 PEQGSKYKKENQSLLCQPATEFLPVINEVYKKLVEKTKSIPGAKVENNKFCASVHFRCVEEN----KWSDLANQVRSVLK 246 (354)
T ss_pred CCCCccccccccccccccchhhHHHHHHHHHHHHHHHhcCCCCEEEecCcEEEEEeCCCChH----HHHHHHHHHHHHHh
Confidence 64 345532 11123456887777766555 47899999999999999999998765 24567777877777
Q ss_pred CCC-eEEEEcCeEEEEEeC-CCCHHHHHHHHHHHhhhcCCCcceEEEEeCCchhHHHHHHccccccCCCCCCCccEEEEE
Q 003025 737 NEP-AAVKSGQFIVEVKPQ-GVSKGVVAEKIFTTMAESGRHADFVLCIGDDRSDEDMFEIIGNATSSGVLSSNASVFACT 814 (856)
Q Consensus 737 ~~~-~~v~~g~~~vEI~p~-gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~ 814 (856)
+.+ +.+..|+..+||+|. ++|||.|+++|++.+...+...++++|||||.+||+||+.+..... -+++.
T Consensus 247 ~~~~l~v~~GkkVvEvrP~~~~dKG~Av~~Ll~~~~~~~~~~~~pvyiGDD~TDEDaF~~L~~~~~---------G~gI~ 317 (354)
T PLN02151 247 NYPKLMLTQGRKVLEIRPIIKWDKGKALEFLLESLGYANCTDVFPIYIGDDRTDEDAFKILRDKKQ---------GLGIL 317 (354)
T ss_pred hCCCcEEecCCEEEEEeCCCCCCHHHHHHHHHHhcccccCCCCeEEEEcCCCcHHHHHHHHhhcCC---------CccEE
Confidence 766 789999999999995 9999999999999872222234689999999999999999864211 15677
Q ss_pred eC--CCccccceEcCChhHHHHHHHHHHHh
Q 003025 815 VG--QKPSKAKYYLDDAAEVVTMLEALAEA 842 (856)
Q Consensus 815 vG--~~~s~A~y~l~~~~eV~~~L~~L~~~ 842 (856)
|| .++|.|+|+|+++++|.++|+.|+.-
T Consensus 318 Vg~~~k~T~A~y~L~dp~eV~~~L~~L~~~ 347 (354)
T PLN02151 318 VSKYAKETNASYSLQEPDEVMEFLERLVEW 347 (354)
T ss_pred eccCCCCCcceEeCCCHHHHHHHHHHHHHh
Confidence 77 67899999999999999999999863
|
|
| >PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=99.94 E-value=5.5e-26 Score=245.31 Aligned_cols=225 Identities=17% Similarity=0.202 Sum_probs=154.3
Q ss_pred CcEEEEEecCCCCCCCCCCCCCCCHHHHHHHHHHHhhCCCeEEEecCCChhhHHHhhcCCC-CccEEeeCCEEEEeCCC-
Q 003025 590 KSRAILFDYDGTVMPQTSINKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSPCK-KLGIAAEHGYFMRWSAD- 667 (856)
Q Consensus 590 ~~rlI~~DlDGTLl~~~~~~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~~~-~lgliaenG~~I~~~~~- 667 (856)
|+|+|++|+||||++ .++.++++++++|++| +++|+.|+|||||+...+.+++..+. ..++++.||+.|+...+
T Consensus 1 m~kli~~DlDGTLl~---~~~~i~~~~~~ai~~l-~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~I~~~~~~ 76 (272)
T PRK15126 1 MARLAAFDMDGTLLM---PDHHLGEKTLSTLARL-RERDITLTFATGRHVLEMQHILGALSLDAYLITGNGTRVHSLEGE 76 (272)
T ss_pred CccEEEEeCCCcCcC---CCCcCCHHHHHHHHHH-HHCCCEEEEECCCCHHHHHHHHHHcCCCCcEEecCCcEEEcCCCC
Confidence 479999999999999 7889999999999997 88999999999999999999887653 34679999999986333
Q ss_pred cceEecCCCCcccHHHHHHHHHHHHhhc--------CCcceEEeccc---------ceEEeeec---C-CCCC-------
Q 003025 668 EEWQNCGQSVDFGWIQIAEPVMKLYTES--------TDGSYIEIKES---------ALVWHHRD---A-DPGF------- 719 (856)
Q Consensus 668 ~~w~~~~~~~~~~w~~~v~~i~~~~~~~--------~~Gs~ie~k~~---------~l~~~~~~---~-dp~~------- 719 (856)
..+...++ .+.+.++++...+. ..+.+...... ...+...+ . +...
T Consensus 77 ~l~~~~i~------~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ki~~~~ 150 (272)
T PRK15126 77 LLHRQDLP------ADVAELVLHQQWDTRASMHVFNDDGWFTGKEIPALLQAHVYSGFRYQLIDLKRLPAHGVTKICFCG 150 (272)
T ss_pred EEEeecCC------HHHHHHHHHHhhhcCcEEEEEcCCeEEecCCcHHHHHHHHhcCCceEEecHHHccccCceEEEEEC
Confidence 33333222 12333333322111 01111110000 00000000 0 0000
Q ss_pred CchhHHHHHHHHHHHhcCCCeEEEEcCeEEEEEeCCCCHHHHHHHHHHHhhhcCCCcceEEEEeCCchhHHHHHHccccc
Q 003025 720 GSSQAKELLDHLESVLANEPAAVKSGQFIVEVKPQGVSKGVVAEKIFTTMAESGRHADFVLCIGDDRSDEDMFEIIGNAT 799 (856)
Q Consensus 720 ~~~~a~el~~~L~~~l~~~~~~v~~g~~~vEI~p~gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~ 799 (856)
......++.+.+.+.+......+.++..++||.|+++|||.|+++|++++ |++++++++|||+.||++||+.+|.
T Consensus 151 ~~~~~~~~~~~l~~~~~~~~~~~~s~~~~~eI~~~g~sKg~al~~l~~~~---gi~~~~v~afGD~~NDi~Ml~~ag~-- 225 (272)
T PRK15126 151 DHDDLTRLQIQLNEALGERAHLCFSATDCLEVLPVGCNKGAALAVLSQHL---GLSLADCMAFGDAMNDREMLGSVGR-- 225 (272)
T ss_pred CHHHHHHHHHHHHHHhcCCEEEEEcCCcEEEeecCCCChHHHHHHHHHHh---CCCHHHeEEecCCHHHHHHHHHcCC--
Confidence 01122344455555444333445567789999999999999999999999 9999999999999999999999996
Q ss_pred cCCCCCCCccEEEEEeCCC----ccccce--Ec--CChhHHHHHHHHHHH
Q 003025 800 SSGVLSSNASVFACTVGQK----PSKAKY--YL--DDAAEVVTMLEALAE 841 (856)
Q Consensus 800 ~~~~~~~~~~~~av~vG~~----~s~A~y--~l--~~~~eV~~~L~~L~~ 841 (856)
+|+|||+ +..|+| ++ ++.++|+++|+++..
T Consensus 226 ------------~vAm~Na~~~vK~~A~~~~v~~~n~edGva~~l~~~~~ 263 (272)
T PRK15126 226 ------------GFIMGNAMPQLRAELPHLPVIGHCRNQAVSHYLTHWLD 263 (272)
T ss_pred ------------ceeccCChHHHHHhCCCCeecCCCcchHHHHHHHHHhc
Confidence 5777765 566776 54 467899999999873
|
|
| >COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.94 E-value=8.1e-26 Score=242.90 Aligned_cols=225 Identities=20% Similarity=0.248 Sum_probs=159.1
Q ss_pred CcEEEEEecCCCCCCCCCCCCCCCHHHHHHHHHHHhhCCCeEEEecCCChhhHHHhhcCCCCc-cEEeeCCEEEEeCCCc
Q 003025 590 KSRAILFDYDGTVMPQTSINKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSPCKKL-GIAAEHGYFMRWSADE 668 (856)
Q Consensus 590 ~~rlI~~DlDGTLl~~~~~~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~~~~l-gliaenG~~I~~~~~~ 668 (856)
++|+|++|+||||++ .+++++++++++|+++ +++|+.|+|+|||+...+.+++..+..- .++++||++|...+..
T Consensus 2 ~~kli~~DlDGTLl~---~~~~i~~~~~~al~~~-~~~g~~v~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~i~~~~~~ 77 (264)
T COG0561 2 MIKLLAFDLDGTLLD---SNKTISPETKEALARL-REKGVKVVLATGRPLPDVLSILEELGLDGPLITFNGALIYNGGEL 77 (264)
T ss_pred CeeEEEEcCCCCccC---CCCccCHHHHHHHHHH-HHCCCEEEEECCCChHHHHHHHHHcCCCccEEEeCCeEEecCCcE
Confidence 689999999999999 7888999999999996 8999999999999999999999877533 6999999999988444
Q ss_pred ceEecCCCCcccHHHHHHHHHHHHhhcCC--cceEEecccc------------eE-----EeeecCC--CC---CC----
Q 003025 669 EWQNCGQSVDFGWIQIAEPVMKLYTESTD--GSYIEIKESA------------LV-----WHHRDAD--PG---FG---- 720 (856)
Q Consensus 669 ~w~~~~~~~~~~w~~~v~~i~~~~~~~~~--Gs~ie~k~~~------------l~-----~~~~~~d--p~---~~---- 720 (856)
.+....+ .+.+..+++....... ..+....... .. +.....+ .+ +.
T Consensus 78 i~~~~l~------~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (264)
T COG0561 78 LFQKPLS------REDVEELLELLEDFQGIALVLYTDDGIYLTKKRGTFAEARIGFANLSPVGREAAELEDNKIIALDKD 151 (264)
T ss_pred EeeecCC------HHHHHHHHHHHHhccCceEEEEeccceeeccCCCcccccccccccccccccchhhcCcceEEEEecC
Confidence 4433221 2344444444422111 1111110000 00 0000000 00 00
Q ss_pred chhHHHHHHHHHHHhcCCCeEEEEcCeE-EEEEeCCCCHHHHHHHHHHHhhhcCCCcceEEEEeCCchhHHHHHHccccc
Q 003025 721 SSQAKELLDHLESVLANEPAAVKSGQFI-VEVKPQGVSKGVVAEKIFTTMAESGRHADFVLCIGDDRSDEDMFEIIGNAT 799 (856)
Q Consensus 721 ~~~a~el~~~L~~~l~~~~~~v~~g~~~-vEI~p~gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~ 799 (856)
.....++.+.+.+.+......+.++..+ +||+|+|+|||.|++++++++ |+++++|++|||+.||++||+.+|.
T Consensus 152 ~~~~~~~~~~l~~~~~~~~~~~~~s~~~~lei~~~g~~K~~al~~l~~~l---gi~~~~v~afGD~~ND~~Ml~~ag~-- 226 (264)
T COG0561 152 HEILEELVEALRKRFPDLGLTVSSSGPISLDITPKGVSKGYALQRLAKLL---GIKLEEVIAFGDSTNDIEMLEVAGL-- 226 (264)
T ss_pred hHhHHHHHHHHhhhccccceEEEEcCCceEEEecCCCchHHHHHHHHHHh---CCCHHHeEEeCCccccHHHHHhcCe--
Confidence 1223445555555555445566665554 999999999999999999999 9999999999999999999999985
Q ss_pred cCCCCCCCccEEEEEeCCC----ccccceEc--CChhHHHHHHHHHHH
Q 003025 800 SSGVLSSNASVFACTVGQK----PSKAKYYL--DDAAEVVTMLEALAE 841 (856)
Q Consensus 800 ~~~~~~~~~~~~av~vG~~----~s~A~y~l--~~~~eV~~~L~~L~~ 841 (856)
+|+|||+ +..|++++ ++.++|++.|+++..
T Consensus 227 ------------gvam~Na~~~~k~~A~~vt~~n~~~Gv~~~l~~~~~ 262 (264)
T COG0561 227 ------------GVAMGNADEELKELADYVTTSNDEDGVAEALEKLLL 262 (264)
T ss_pred ------------eeeccCCCHHHHhhCCcccCCccchHHHHHHHHHhc
Confidence 6788876 57788664 467999999998763
|
|
| >PRK10976 putative hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.2e-25 Score=241.88 Aligned_cols=224 Identities=17% Similarity=0.216 Sum_probs=151.8
Q ss_pred CcEEEEEecCCCCCCCCCCCCCCCHHHHHHHHHHHhhCCCeEEEecCCChhhHHHhhcCCC-CccEEeeCCEEEEeCCC-
Q 003025 590 KSRAILFDYDGTVMPQTSINKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSPCK-KLGIAAEHGYFMRWSAD- 667 (856)
Q Consensus 590 ~~rlI~~DlDGTLl~~~~~~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~~~-~lgliaenG~~I~~~~~- 667 (856)
++|+|++|+||||++ .++.++++++++|++| +++|+.|+|||||+...+.+++..+. ..++++.||+.|...++
T Consensus 1 mikli~~DlDGTLl~---~~~~is~~~~~ai~~l-~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~i~~~~~~ 76 (266)
T PRK10976 1 MYQVVASDLDGTLLS---PDHTLSPYAKETLKLL-TARGIHFVFATGRHHVDVGQIRDNLEIKSYMITSNGARVHDTDGN 76 (266)
T ss_pred CceEEEEeCCCCCcC---CCCcCCHHHHHHHHHH-HHCCCEEEEEcCCChHHHHHHHHhcCCCCeEEEcCCcEEECCCCC
Confidence 479999999999999 7788999999999996 88999999999999999998887664 34579999999986433
Q ss_pred cceEecCCCCcccHHHHHHHHHHHHhhc---------CCcceEEecccc---------eEEeee---cCCC-CCC-----
Q 003025 668 EEWQNCGQSVDFGWIQIAEPVMKLYTES---------TDGSYIEIKESA---------LVWHHR---DADP-GFG----- 720 (856)
Q Consensus 668 ~~w~~~~~~~~~~w~~~v~~i~~~~~~~---------~~Gs~ie~k~~~---------l~~~~~---~~dp-~~~----- 720 (856)
..+...++ .+.+.++++...+. ..+.++...... ...... ...+ .+.
T Consensus 77 ~i~~~~l~------~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ki~~~ 150 (266)
T PRK10976 77 LIFSHNLD------RDIASDLFGVVHDNPDIITNVYRDDEWFMNRHRPEEMRFFKEAVFKYQLYEPGLLEPDGVSKVFFT 150 (266)
T ss_pred EehhhcCC------HHHHHHHHHhhcccCCEEEEEEcCCeEEEcCCChHHHHHHHhcCCcceeechhhcccCCceEEEEE
Confidence 23322221 12333333332211 011111110000 000000 0000 000
Q ss_pred ---chhHHHHHHHHHHHhcCCCeEEEEcCeEEEEEeCCCCHHHHHHHHHHHhhhcCCCcceEEEEeCCchhHHHHHHccc
Q 003025 721 ---SSQAKELLDHLESVLANEPAAVKSGQFIVEVKPQGVSKGVVAEKIFTTMAESGRHADFVLCIGDDRSDEDMFEIIGN 797 (856)
Q Consensus 721 ---~~~a~el~~~L~~~l~~~~~~v~~g~~~vEI~p~gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~ 797 (856)
.....++.+.+.+.+......+.++..++||.|+++|||.|++++++++ |+++++|+||||+.||++||+.+|.
T Consensus 151 ~~~~~~~~~~~~~l~~~~~~~~~~~~s~~~~~eI~~~gvsKg~al~~l~~~l---gi~~~~viafGD~~NDi~Ml~~ag~ 227 (266)
T PRK10976 151 CDSHEKLLPLEQAINARWGDRVNVSFSTLTCLEVMAGGVSKGHALEAVAKKL---GYSLKDCIAFGDGMNDAEMLSMAGK 227 (266)
T ss_pred cCCHHHHHHHHHHHHHHhCCcEEEEEeCCceEEEEcCCCChHHHHHHHHHHc---CCCHHHeEEEcCCcccHHHHHHcCC
Confidence 0112233344444443333445567789999999999999999999999 9999999999999999999999996
Q ss_pred cccCCCCCCCccEEEEEeCCC----ccccc--eEc--CChhHHHHHHHHHH
Q 003025 798 ATSSGVLSSNASVFACTVGQK----PSKAK--YYL--DDAAEVVTMLEALA 840 (856)
Q Consensus 798 ~~~~~~~~~~~~~~av~vG~~----~s~A~--y~l--~~~~eV~~~L~~L~ 840 (856)
+|+|||+ +..|+ +++ ++.++|+++|+++.
T Consensus 228 --------------~vAm~NA~~~vK~~A~~~~v~~~n~edGVa~~l~~~~ 264 (266)
T PRK10976 228 --------------GCIMGNAHQRLKDLLPELEVIGSNADDAVPHYLRKLY 264 (266)
T ss_pred --------------CeeecCCcHHHHHhCCCCeecccCchHHHHHHHHHHh
Confidence 4666665 46666 665 46789999999875
|
|
| >PRK10513 sugar phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.2e-25 Score=240.34 Aligned_cols=224 Identities=18% Similarity=0.242 Sum_probs=153.2
Q ss_pred CcEEEEEecCCCCCCCCCCCCCCCHHHHHHHHHHHhhCCCeEEEecCCChhhHHHhhcCCCC----ccEEeeCCEEEEeC
Q 003025 590 KSRAILFDYDGTVMPQTSINKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSPCKK----LGIAAEHGYFMRWS 665 (856)
Q Consensus 590 ~~rlI~~DlDGTLl~~~~~~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~~~~----lgliaenG~~I~~~ 665 (856)
++|+|++|+||||++ .++.++++++++|++| +++|+.|+|||||+...+.+.+..+.- .++++.||+.|...
T Consensus 2 ~~kli~~DlDGTLl~---~~~~i~~~~~~ai~~l-~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~~~~I~~NGa~i~~~ 77 (270)
T PRK10513 2 AIKLIAIDMDGTLLL---PDHTISPAVKQAIAAA-RAKGVNVVLTTGRPYAGVHRYLKELHMEQPGDYCITNNGALVQKA 77 (270)
T ss_pred ceEEEEEecCCcCcC---CCCccCHHHHHHHHHH-HHCCCEEEEecCCChHHHHHHHHHhCCCCCCCeEEEcCCeEEEEC
Confidence 479999999999999 7789999999999997 889999999999999999988876531 25899999999863
Q ss_pred --CCcceEecCCCCcccHHHHHHHHHHHHhhc--------CCcceEEecccc-----------eEEeeec---CCC--CC
Q 003025 666 --ADEEWQNCGQSVDFGWIQIAEPVMKLYTES--------TDGSYIEIKESA-----------LVWHHRD---ADP--GF 719 (856)
Q Consensus 666 --~~~~w~~~~~~~~~~w~~~v~~i~~~~~~~--------~~Gs~ie~k~~~-----------l~~~~~~---~dp--~~ 719 (856)
+...+...++. +.+..+++...+. ..+.+...+... +...+.. .++ .+
T Consensus 78 ~~~~~i~~~~l~~------~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (270)
T PRK10513 78 ADGETVAQTALSY------DDYLYLEKLSREVGVHFHALDRNTLYTANRDISYYTVHESFLTGIPLVFREVEKMDPNLQF 151 (270)
T ss_pred CCCCEEEecCCCH------HHHHHHHHHHHHcCCcEEEEECCEEEEecCCcchhHHHhhhhccCCccccchhhccccCCc
Confidence 33334433322 1222222221110 111222111100 0000000 000 00
Q ss_pred C-------chhHHHHHHHHHHHhcCCCeEEEEcCeEEEEEeCCCCHHHHHHHHHHHhhhcCCCcceEEEEeCCchhHHHH
Q 003025 720 G-------SSQAKELLDHLESVLANEPAAVKSGQFIVEVKPQGVSKGVVAEKIFTTMAESGRHADFVLCIGDDRSDEDMF 792 (856)
Q Consensus 720 ~-------~~~a~el~~~L~~~l~~~~~~v~~g~~~vEI~p~gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf 792 (856)
. .....++.+.+.+.+......+.++..++||.|+|+|||.|+++|++++ |++++++++|||+.||++||
T Consensus 152 ~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~eI~~~gvsKg~al~~l~~~~---gi~~~~v~afGD~~NDi~Ml 228 (270)
T PRK10513 152 PKVMMIDEPEILDAAIARIPAEVKERYTVLKSAPYFLEILDKRVNKGTGVKSLAEHL---GIKPEEVMAIGDQENDIAMI 228 (270)
T ss_pred eEEEEeCCHHHHHHHHHHhHHHhcCcEEEEEecCeeEEEeCCCCChHHHHHHHHHHh---CCCHHHEEEECCchhhHHHH
Confidence 0 0112333334433333333445677889999999999999999999999 99999999999999999999
Q ss_pred HHccccccCCCCCCCccEEEEEeCCC----ccccceEcC--ChhHHHHHHHHHH
Q 003025 793 EIIGNATSSGVLSSNASVFACTVGQK----PSKAKYYLD--DAAEVVTMLEALA 840 (856)
Q Consensus 793 ~~ag~~~~~~~~~~~~~~~av~vG~~----~s~A~y~l~--~~~eV~~~L~~L~ 840 (856)
+.+|. +|+|||+ +..|+|++. +.++|+++|+++.
T Consensus 229 ~~ag~--------------~vAm~NA~~~vK~~A~~vt~~n~~dGva~~i~~~~ 268 (270)
T PRK10513 229 EYAGV--------------GVAMGNAIPSVKEVAQFVTKSNLEDGVAFAIEKYV 268 (270)
T ss_pred HhCCc--------------eEEecCccHHHHHhcCeeccCCCcchHHHHHHHHh
Confidence 99996 5777765 578999884 5788999999875
|
|
| >cd03792 GT1_Trehalose_phosphorylase Trehalose phosphorylase (TP) reversibly catalyzes trehalose synthesis and degradation from alpha-glucose-1-phosphate (alpha-Glc-1-P) and glucose | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.6e-24 Score=244.26 Aligned_cols=302 Identities=16% Similarity=0.152 Sum_probs=208.0
Q ss_pred ChHhHHHHHHHHHHHHHHHHHHcCCCCCEEEEeCcccchHHHHHHhhcCCCeEEEEEccCCCChHHHhcCCchHHHHHHh
Q 003025 175 DRSLWEAYVSANKIFSQRVIEVINPEDDYVWIHDYHLMVLPTFLRRRFTRLRMGFFLHSPFPSSEIYRTLPVREEILKAL 254 (856)
Q Consensus 175 ~~~~w~~Y~~vN~~fa~~i~~~~~~~~D~VwihDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~~~~lp~r~eil~~l 254 (856)
....+..|...++.++.++.+..++ |+||+||++.+.++...+. .++|+.+++|+++.... .+ ....+.+.+
T Consensus 62 ~~~~~~~~~~~~~~~~~~~~~~~~~--Dvv~~h~~~~~~~~~~~~~--~~~~~i~~~H~~~~~~~-~~---~~~~~~~~~ 133 (372)
T cd03792 62 SEEEKEIYLEWNEENAERPLLDLDA--DVVVIHDPQPLALPLFKKK--RGRPWIWRCHIDLSSPN-RR---VWDFLQPYI 133 (372)
T ss_pred CHHHHHHHHHHHHHHhccccccCCC--CEEEECCCCchhHHHhhhc--CCCeEEEEeeeecCCCc-HH---HHHHHHHHH
Confidence 3456788988888887764444444 9999999998777766543 36789999999885431 00 112223344
Q ss_pred HhCCEEcccCHHHHHHHHHHHHhhhCceecccCceeeEEECCEEEEEEEeecccCchHHHHHhcCchHHHHHHHHHHHc-
Q 003025 255 LNADLIGFHTFDYARHFLSCCSRMLGLEYQSKRGYIGLEYYGRTVGIKIMPVGIHMGQIESVLRLADKDWRVQELKQQF- 333 (856)
Q Consensus 255 l~~dligf~t~~~~~~Fl~~~~r~lg~~~~~~~~~~~~~~~gr~~~i~i~p~GId~~~~~~~~~~~~~~~~~~~l~~~~- 333 (856)
..+|.+.+.+.++++.++ ..+ .+ ++|+|||+......... ......+++++
T Consensus 134 ~~~d~~i~~~~~~~~~~~----------------------~~~--~~-vipngvd~~~~~~~~~~---~~~~~~~~~~~~ 185 (372)
T cd03792 134 EDYDAAVFHLPEYVPPQV----------------------PPR--KV-IIPPSIDPLSGKNRELS---PADIEYILEKYG 185 (372)
T ss_pred HhCCEEeecHHHhcCCCC----------------------CCc--eE-EeCCCCCCCccccCCCC---HHHHHHHHHHhC
Confidence 457777765533221110 112 22 78999997532111111 12233445555
Q ss_pred --CCCeEEEeccCccccCCHHHHHHHHHHHHHhCCCCcCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCc
Q 003025 334 --EGKTVLLGVDDMDIFKGVDLKLLAMEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGY 411 (856)
Q Consensus 334 --~~k~iil~VdRld~~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~~~~lv~~IN~~~~~~~~ 411 (856)
.++++|++|||+++.||+..+++|++.+.+++|+++ |+++|.+... .++..++.++ +.++.+. .
T Consensus 186 ~~~~~~~i~~vgrl~~~Kg~~~ll~a~~~l~~~~~~~~----l~i~G~g~~~-~~~~~~~~~~---~~~~~~~------~ 251 (372)
T cd03792 186 IDPERPYITQVSRFDPWKDPFGVIDAYRKVKERVPDPQ----LVLVGSGATD-DPEGWIVYEE---VLEYAEG------D 251 (372)
T ss_pred CCCCCcEEEEEeccccccCcHHHHHHHHHHHhhCCCCE----EEEEeCCCCC-CchhHHHHHH---HHHHhCC------C
Confidence 478899999999999999999999999988888755 8888865421 1222232222 2222111 1
Q ss_pred ccEEEEcCC-CCHHHHHHHHHhcceeeeccccccCCCcccceeeeecCCCCCCCCCCCCCCCCceEEecCCcccccccC-
Q 003025 412 EPVVFIDKP-VTLSERAAYYTIAECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIGCSPSLS- 489 (856)
Q Consensus 412 ~pvv~~~~~-v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~- 489 (856)
..++++... ++.+++.++|++||+|++||.+||||++++|||||+. |+|+|+.+|..+.+.
T Consensus 252 ~~v~~~~~~~~~~~~~~~~~~~ad~~v~~s~~Eg~g~~~lEA~a~G~-----------------Pvv~s~~~~~~~~i~~ 314 (372)
T cd03792 252 PDIHVLTLPPVSDLEVNALQRASTVVLQKSIREGFGLTVTEALWKGK-----------------PVIAGPVGGIPLQIED 314 (372)
T ss_pred CCeEEEecCCCCHHHHHHHHHhCeEEEeCCCccCCCHHHHHHHHcCC-----------------CEEEcCCCCchhhccc
Confidence 125555433 4899999999999999999999999999999999954 999999999888883
Q ss_pred --CceeeCCCCHHHHHHHHHHHHcCCHHHHHHHHHHHhhhh-hcCCHHHHHHHHHHHHHH
Q 003025 490 --GAIRVNPWNIEATAEAMHEAIQMNEAEKQLRHEKHYRYV-STHDVAYWARSFFQDMER 546 (856)
Q Consensus 490 --~al~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v-~~~~~~~W~~~~l~~l~~ 546 (856)
.|++++ +.+++|++|.+++++ +++++.+.++.++++ ..+++...++++++.+++
T Consensus 315 ~~~g~~~~--~~~~~a~~i~~ll~~-~~~~~~~~~~a~~~~~~~~s~~~~~~~~~~~~~~ 371 (372)
T cd03792 315 GETGFLVD--TVEEAAVRILYLLRD-PELRRKMGANAREHVRENFLITRHLKDYLYLISK 371 (372)
T ss_pred CCceEEeC--CcHHHHHHHHHHHcC-HHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHh
Confidence 377776 467899999999985 556666667777876 468999999999887664
|
The catalyzing activity includes the phosphorolysis of trehalose, which produce alpha-Glc-1-P and glucose, and the subsequent synthesis of trehalose. This family is most closely related to the GT1 family of glycosyltransferases. |
| >PRK01158 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.93 E-value=2.5e-24 Score=226.37 Aligned_cols=213 Identities=21% Similarity=0.223 Sum_probs=147.8
Q ss_pred CcEEEEEecCCCCCCCCCCCCCCCHHHHHHHHHHHhhCCCeEEEecCCChhhHHHhhcCCC-CccEEeeCCEEEEeCC-C
Q 003025 590 KSRAILFDYDGTVMPQTSINKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSPCK-KLGIAAEHGYFMRWSA-D 667 (856)
Q Consensus 590 ~~rlI~~DlDGTLl~~~~~~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~~~-~lgliaenG~~I~~~~-~ 667 (856)
++|+|++|+||||++ .++.+++++.++|++| +++|+.|+|||||+...+.+++..++ ..+++++||+++.... +
T Consensus 2 ~~kli~~DlDGTLl~---~~~~i~~~~~~al~~l-~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~~~~ 77 (230)
T PRK01158 2 KIKAIAIDIDGTITD---KDRRLSLKAVEAIRKA-EKLGIPVILATGNVLCFARAAAKLIGTSGPVIAENGGVISVGFDG 77 (230)
T ss_pred ceeEEEEecCCCcCC---CCCccCHHHHHHHHHH-HHCCCEEEEEcCCchHHHHHHHHHhCCCCcEEEecCeEEEEcCCC
Confidence 479999999999999 7788999999999997 88999999999999999988876654 3468999999998752 2
Q ss_pred -cceEecCCCCcccHHHHHHHHHHHHhhcCCcc--eEEecc--cce--EEeeecCCCCCCchhHHHHHHHHHHHhcCCCe
Q 003025 668 -EEWQNCGQSVDFGWIQIAEPVMKLYTESTDGS--YIEIKE--SAL--VWHHRDADPGFGSSQAKELLDHLESVLANEPA 740 (856)
Q Consensus 668 -~~w~~~~~~~~~~w~~~v~~i~~~~~~~~~Gs--~ie~k~--~~l--~~~~~~~dp~~~~~~a~el~~~L~~~l~~~~~ 740 (856)
..+.... + .+..+++...+..+.. .+.... ... ...+.. ...+++.+.++.. ...+
T Consensus 78 ~~~~~~~~---~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~l~~~--~~~~ 140 (230)
T PRK01158 78 KRIFLGDI---E-----ECEKAYSELKKRFPEASTSLTKLDPDYRKTEVALRRT-------VPVEEVRELLEEL--GLDL 140 (230)
T ss_pred CEEEEcch---H-----HHHHHHHHHHHhccccceeeecCCcccccceeeeccc-------ccHHHHHHHHHHc--CCcE
Confidence 2333221 1 1222222222211111 011000 000 000110 0122333333322 1224
Q ss_pred EEEEcCeEEEEEeCCCCHHHHHHHHHHHhhhcCCCcceEEEEeCCchhHHHHHHccccccCCCCCCCccEEEEEeCCC--
Q 003025 741 AVKSGQFIVEVKPQGVSKGVVAEKIFTTMAESGRHADFVLCIGDDRSDEDMFEIIGNATSSGVLSSNASVFACTVGQK-- 818 (856)
Q Consensus 741 ~v~~g~~~vEI~p~gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~-- 818 (856)
.+..+..++||.|+++|||.|++++++++ |++++++++|||+.||++||+.+|. +++|||.
T Consensus 141 ~~~~~~~~~ei~~~~~~Kg~al~~l~~~~---~i~~~~~i~~GD~~NDi~m~~~ag~--------------~vam~Na~~ 203 (230)
T PRK01158 141 EIVDSGFAIHIKSPGVNKGTGLKKLAELM---GIDPEEVAAIGDSENDLEMFEVAGF--------------GVAVANADE 203 (230)
T ss_pred EEEecceEEEEeeCCCChHHHHHHHHHHh---CCCHHHEEEECCchhhHHHHHhcCc--------------eEEecCccH
Confidence 45555678999999999999999999999 9999999999999999999999985 5677765
Q ss_pred --ccccceEcC--ChhHHHHHHHHHH
Q 003025 819 --PSKAKYYLD--DAAEVVTMLEALA 840 (856)
Q Consensus 819 --~s~A~y~l~--~~~eV~~~L~~L~ 840 (856)
+..|+|++. +.++|++.|+++.
T Consensus 204 ~vk~~a~~v~~~n~~~Gv~~~l~~~~ 229 (230)
T PRK01158 204 ELKEAADYVTEKSYGEGVAEAIEHLL 229 (230)
T ss_pred HHHHhcceEecCCCcChHHHHHHHHh
Confidence 577899874 5788999998764
|
|
| >PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=99.93 E-value=2.9e-24 Score=231.77 Aligned_cols=224 Identities=15% Similarity=0.138 Sum_probs=149.0
Q ss_pred CcEEEEEecCCCCCCCCCCCCCCCHHHHHHHHHHHhhCCCeEEEecCCChhhHHHhhcCCC--CccEEeeCCEEEEeCCC
Q 003025 590 KSRAILFDYDGTVMPQTSINKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSPCK--KLGIAAEHGYFMRWSAD 667 (856)
Q Consensus 590 ~~rlI~~DlDGTLl~~~~~~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~~~--~lgliaenG~~I~~~~~ 667 (856)
.+++|++|+||||++ .++.++++++++|++| +++|+.|+|||||+...+.+++..+. ..++|++||+.|+.+++
T Consensus 6 ~~~lI~~DlDGTLL~---~~~~i~~~~~~ai~~l-~~~Gi~~viaTGR~~~~i~~~~~~l~~~~~~~I~~NGa~I~~~~~ 81 (271)
T PRK03669 6 DPLLIFTDLDGTLLD---SHTYDWQPAAPWLTRL-REAQVPVILCSSKTAAEMLPLQQTLGLQGLPLIAENGAVIQLDEQ 81 (271)
T ss_pred CCeEEEEeCccCCcC---CCCcCcHHHHHHHHHH-HHcCCeEEEEcCCCHHHHHHHHHHhCCCCCcEEEeCCCEEEecCc
Confidence 479999999999998 6778899999999997 88999999999999999999987763 24689999999987643
Q ss_pred cc----eEecCCCCcccHHHHHHHHHHHHhhcCCcceE--Eec----c-cceEE---------eeecCCCCC----Cchh
Q 003025 668 EE----WQNCGQSVDFGWIQIAEPVMKLYTESTDGSYI--EIK----E-SALVW---------HHRDADPGF----GSSQ 723 (856)
Q Consensus 668 ~~----w~~~~~~~~~~w~~~v~~i~~~~~~~~~Gs~i--e~k----~-~~l~~---------~~~~~dp~~----~~~~ 723 (856)
.. +.......+ .+.+..+++...+.. +..+ ... . ..... ........+ ....
T Consensus 82 ~~~~~~~~~~~~~l~---~~~~~~i~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (271)
T PRK03669 82 WQDHPDFPRIISGIS---HGEIRQVLNTLREKE-GFKFTTFDDVDDATIAEWTGLSRSQAALARLHEASVTLIWRDSDER 157 (271)
T ss_pred ccCCCCceEeecCCC---HHHHHHHHHHHHHhc-CCceeecccCCHHHHHHHhCCCHHHHHHHhccccCceeEecCCHHH
Confidence 11 100000111 123333333322110 1000 000 0 00000 000000000 0112
Q ss_pred HHHHHHHHHHHhcCCCeEEEEcCeEEEEEeCCCCHHHHHHHHHHHhhhcCC---CcceEEEEeCCchhHHHHHHcccccc
Q 003025 724 AKELLDHLESVLANEPAAVKSGQFIVEVKPQGVSKGVVAEKIFTTMAESGR---HADFVLCIGDDRSDEDMFEIIGNATS 800 (856)
Q Consensus 724 a~el~~~L~~~l~~~~~~v~~g~~~vEI~p~gvsKG~al~~Ll~~l~~~gi---~~d~vlaiGD~~ND~~Mf~~ag~~~~ 800 (856)
..++.+.+.. ..+.+..+..++||.|+++|||.|++++++++ |+ ++++|+||||+.||++||+.+|.
T Consensus 158 ~~~~~~~l~~----~~~~~~~~~~~iEi~~~g~sKg~al~~l~~~l---gi~~~~~~~viafGDs~NDi~Ml~~ag~--- 227 (271)
T PRK03669 158 MAQFTARLAE----LGLQFVQGARFWHVLDASAGKDQAANWLIATY---QQLSGTRPTTLGLGDGPNDAPLLDVMDY--- 227 (271)
T ss_pred HHHHHHHHHH----CCCEEEecCeeEEEecCCCCHHHHHHHHHHHH---HhhcCCCceEEEEcCCHHHHHHHHhCCE---
Confidence 2333344432 23444556679999999999999999999999 99 99999999999999999999984
Q ss_pred CCCCCCCccEEEEEeCCCc----------cccceEcC--ChhHHHHHHHHHHHh
Q 003025 801 SGVLSSNASVFACTVGQKP----------SKAKYYLD--DAAEVVTMLEALAEA 842 (856)
Q Consensus 801 ~~~~~~~~~~~av~vG~~~----------s~A~y~l~--~~~eV~~~L~~L~~~ 842 (856)
+|+||+.. ..|.|+++ +.+++.+.|+.+.++
T Consensus 228 -----------gvAM~~~~~~~~~l~~~~~~~~~~~~~~~~~g~~~~l~~~~~~ 270 (271)
T PRK03669 228 -----------AVVVKGLNREGVHLQDDDPARVYRTQREGPEGWREGLDHFFSA 270 (271)
T ss_pred -----------EEEecCCCCCCcccccccCCceEeccCCCcHHHHHHHHHHHhc
Confidence 67777432 25778886 568999999998764
|
|
| >PLN02887 hydrolase family protein | Back alignment and domain information |
|---|
Probab=99.92 E-value=4e-24 Score=248.87 Aligned_cols=231 Identities=16% Similarity=0.192 Sum_probs=155.7
Q ss_pred HHHHHHcCCcEEEEEecCCCCCCCCCCCCCCCHHHHHHHHHHHhhCCCeEEEecCCChhhHHHhhcCCC---Cc------
Q 003025 582 IVSAYLRSKSRAILFDYDGTVMPQTSINKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSPCK---KL------ 652 (856)
Q Consensus 582 i~~~y~~s~~rlI~~DlDGTLl~~~~~~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~~~---~l------ 652 (856)
..+.|+ .++|+|++|+||||++ .++.++++++++|++| +++|+.|+|||||++..+..++..+. ..
T Consensus 300 ~~~~~~-~~iKLIa~DLDGTLLn---~d~~Is~~t~eAI~kl-~ekGi~~vIATGR~~~~i~~~l~~L~l~~~~~~I~~~ 374 (580)
T PLN02887 300 SLRFYK-PKFSYIFCDMDGTLLN---SKSQISETNAKALKEA-LSRGVKVVIATGKARPAVIDILKMVDLAGKDGIISES 374 (580)
T ss_pred chhhhc-cCccEEEEeCCCCCCC---CCCccCHHHHHHHHHH-HHCCCeEEEEcCCCHHHHHHHHHHhCcccccceEeec
Confidence 344444 4689999999999999 7889999999999996 88999999999999999998886542 11
Q ss_pred -cEEeeCCEEEEeCCC-cceEecCCCCcccHHHHHHHHHHHHhhc--------CCcceEEecccceE-Ee--eec-----
Q 003025 653 -GIAAEHGYFMRWSAD-EEWQNCGQSVDFGWIQIAEPVMKLYTES--------TDGSYIEIKESALV-WH--HRD----- 714 (856)
Q Consensus 653 -gliaenG~~I~~~~~-~~w~~~~~~~~~~w~~~v~~i~~~~~~~--------~~Gs~ie~k~~~l~-~~--~~~----- 714 (856)
++|+.||++|+...+ ..+...++ .+.+.++++...+. .++.+......... ++ +..
T Consensus 375 ~p~I~~NGA~I~d~~g~~I~~~~L~------~e~v~eIi~~~~~~~i~~~~~~~d~~y~~~~~~~~~~~~~~~~~~~~~~ 448 (580)
T PLN02887 375 SPGVFLQGLLVYGRQGREIYRSNLD------QEVCREACLYSLEHKIPLIAFSQDRCLTLFDHPLVDSLHTIYHEPKAEI 448 (580)
T ss_pred ccEEeecCeEEEECCCcEEEEEeCC------HHHHHHHHHHHHHcCCeEEEEECCeEEEecCchHHHHHHHhhccccccc
Confidence 345668998875333 23443322 13333333332211 11111110000000 00 000
Q ss_pred C-C-------CCCC------c--hhHHHHHHHHHHHhcCCCeEEEEcCeEEEEEeCCCCHHHHHHHHHHHhhhcCCCcce
Q 003025 715 A-D-------PGFG------S--SQAKELLDHLESVLANEPAAVKSGQFIVEVKPQGVSKGVVAEKIFTTMAESGRHADF 778 (856)
Q Consensus 715 ~-d-------p~~~------~--~~a~el~~~L~~~l~~~~~~v~~g~~~vEI~p~gvsKG~al~~Ll~~l~~~gi~~d~ 778 (856)
. + .+.. . ....++.+.+.+.+......+.++..++||.|+|+|||.|+++|++++ |+++++
T Consensus 449 i~~l~~~~~~~~i~Ki~~~~~~e~~~~~l~~~l~~~~~~~~~v~~S~~~~lEI~p~gvSKG~ALk~L~e~l---GI~~ee 525 (580)
T PLN02887 449 MSSVDQLLAAADIQKVIFLDTAEGVSSVLRPYWSEATGDRANVVQAQPDMLEIVPPGTSKGNGVKMLLNHL---GVSPDE 525 (580)
T ss_pred cCCHHHhhcccCeeEEEEEcChHHHHHHHHHHHHHHhcCcEEEEEecCcEEEEecCCCCHHHHHHHHHHHc---CCCHHH
Confidence 0 0 0000 0 011233344444444434556677889999999999999999999999 999999
Q ss_pred EEEEeCCchhHHHHHHccccccCCCCCCCccEEEEEeCCC----ccccceEc--CChhHHHHHHHHHH
Q 003025 779 VLCIGDDRSDEDMFEIIGNATSSGVLSSNASVFACTVGQK----PSKAKYYL--DDAAEVVTMLEALA 840 (856)
Q Consensus 779 vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~----~s~A~y~l--~~~~eV~~~L~~L~ 840 (856)
|+||||+.||++||+.+|. +|+|||+ +..|+|++ ++.++|+++|++++
T Consensus 526 viAFGDs~NDIeMLe~AG~--------------gVAMgNA~eeVK~~Ad~VT~sNdEDGVA~aLek~~ 579 (580)
T PLN02887 526 IMAIGDGENDIEMLQLASL--------------GVALSNGAEKTKAVADVIGVSNDEDGVADAIYRYA 579 (580)
T ss_pred EEEEecchhhHHHHHHCCC--------------EEEeCCCCHHHHHhCCEEeCCCCcCHHHHHHHHhh
Confidence 9999999999999999995 5777775 68899987 46799999999864
|
|
| >PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification [] | Back alignment and domain information |
|---|
Probab=99.92 E-value=5.9e-24 Score=225.02 Aligned_cols=216 Identities=19% Similarity=0.295 Sum_probs=155.8
Q ss_pred EEEecCCCCCCCCCCCCCCCHHHHHHHHHHHhhCCCeEEEecCCChhhHHHhhcCCC-CccEEeeCCEEEEeCCCcc-eE
Q 003025 594 ILFDYDGTVMPQTSINKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSPCK-KLGIAAEHGYFMRWSADEE-WQ 671 (856)
Q Consensus 594 I~~DlDGTLl~~~~~~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~~~-~lgliaenG~~I~~~~~~~-w~ 671 (856)
|++|+||||++ .+..++++++++|++| +++|+.++++|||++..+.+++..++ ..++|+.||+++....+.. +.
T Consensus 1 i~~DlDGTLl~---~~~~i~~~~~~al~~l-~~~g~~~~i~TGR~~~~~~~~~~~~~~~~~~I~~nGa~i~~~~~~~l~~ 76 (254)
T PF08282_consen 1 IFSDLDGTLLN---SDGKISPETIEALKEL-QEKGIKLVIATGRSYSSIKRLLKELGIDDYFICSNGALIDDPKGKILYE 76 (254)
T ss_dssp EEEECCTTTCS---TTSSSCHHHHHHHHHH-HHTTCEEEEECSSTHHHHHHHHHHTTHCSEEEEGGGTEEEETTTEEEEE
T ss_pred cEEEECCceec---CCCeeCHHHHHHHHhh-cccceEEEEEccCcccccccccccccchhhhcccccceeeecccccchh
Confidence 79999999999 7888999999999997 77899999999999999999998765 4589999999994444433 33
Q ss_pred ecCCCCcccHHHHHHHHHHHHhhcC--------CcceEEecc----------cceEEeeec-----CCCC-------CCc
Q 003025 672 NCGQSVDFGWIQIAEPVMKLYTEST--------DGSYIEIKE----------SALVWHHRD-----ADPG-------FGS 721 (856)
Q Consensus 672 ~~~~~~~~~w~~~v~~i~~~~~~~~--------~Gs~ie~k~----------~~l~~~~~~-----~dp~-------~~~ 721 (856)
..++ .+.+..+++...+.. .+.++.... ......... .... ...
T Consensus 77 ~~i~------~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ki~~~~~~ 150 (254)
T PF08282_consen 77 KPID------SDDVKKILKYLKEHNISFFFYTDDDIYIYENKDEEELFFEHKFFNFKESIVSEDDLEDEEIFKILFFPDP 150 (254)
T ss_dssp ESB-------HHHHHHHHHHHHHTTCEEEEEESSEEEESSTTCHHHHHHHHHHTSCEEEESHHHHHHCSSESEEEEESCH
T ss_pred hhee------ccchhheeehhhhcccccccccceeeecccccccchhhhhhcccccccccccccccccccceeeeccccc
Confidence 3222 233344444333321 111111110 000000000 0000 012
Q ss_pred hhHHHHHHHHHHHhcCCCeEEEEcCeEEEEEeCCCCHHHHHHHHHHHhhhcCCCcceEEEEeCCchhHHHHHHccccccC
Q 003025 722 SQAKELLDHLESVLANEPAAVKSGQFIVEVKPQGVSKGVVAEKIFTTMAESGRHADFVLCIGDDRSDEDMFEIIGNATSS 801 (856)
Q Consensus 722 ~~a~el~~~L~~~l~~~~~~v~~g~~~vEI~p~gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~ 801 (856)
.....+.+++.+.+.+....+.++..++||.|+++|||.|++++++++ |++++++++|||+.||++||+.++.
T Consensus 151 ~~~~~l~~~l~~~~~~~~~~~~~~~~~lei~~~~vsK~~ai~~l~~~~---~i~~~~~~~~GD~~ND~~Ml~~~~~---- 223 (254)
T PF08282_consen 151 EDLEQLREELKKKFPNLIDVVRSSPYFLEITPKGVSKGSAIKYLLEYL---GISPEDIIAFGDSENDIEMLELAGY---- 223 (254)
T ss_dssp HHHHHHHHHHHHHHTTTEEEEEEETTEEEEEETTSSHHHHHHHHHHHH---TTSGGGEEEEESSGGGHHHHHHSSE----
T ss_pred hhhhhhhhhhccccCcceeEEEecccceEEeeCCCCHHHHHHHHhhhc---ccccceeEEeecccccHhHHhhcCe----
Confidence 345667777777776655778889999999999999999999999999 9999999999999999999999984
Q ss_pred CCCCCCccEEEEEeCCC----ccccceEcCC--hhHHHHHH
Q 003025 802 GVLSSNASVFACTVGQK----PSKAKYYLDD--AAEVVTML 836 (856)
Q Consensus 802 ~~~~~~~~~~av~vG~~----~s~A~y~l~~--~~eV~~~L 836 (856)
+|+||+. +..|++++.+ .++|+++|
T Consensus 224 ----------~~am~na~~~~k~~a~~i~~~~~~~gv~~~i 254 (254)
T PF08282_consen 224 ----------SVAMGNATPELKKAADYITPSNNDDGVAKAI 254 (254)
T ss_dssp ----------EEEETTS-HHHHHHSSEEESSGTCTHHHHHH
T ss_pred ----------EEEEcCCCHHHHHhCCEEecCCCCChHHHhC
Confidence 6888876 5889998753 37788765
|
This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A .... |
| >TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB | Back alignment and domain information |
|---|
Probab=99.91 E-value=9.6e-24 Score=217.88 Aligned_cols=195 Identities=26% Similarity=0.377 Sum_probs=148.4
Q ss_pred EEEEecCCCCCCCCCCC-CCCCHHHHHHHHHHHhhCCCeEEEecCCChhhHHHhhcCCCCccEEeeCCEEEEeCCCcceE
Q 003025 593 AILFDYDGTVMPQTSIN-KAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSPCKKLGIAAEHGYFMRWSADEEWQ 671 (856)
Q Consensus 593 lI~~DlDGTLl~~~~~~-~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~~~~lgliaenG~~I~~~~~~~w~ 671 (856)
+|++|+||||++ .+ ..+++++.++|++| .+.|+.|+|+|||+...+..++..+ +.+++++||++|+.++...|.
T Consensus 1 li~~D~DgTL~~---~~~~~~~~~~~~~l~~l-~~~g~~~~i~TGR~~~~~~~~~~~~-~~~~i~~nGa~i~~~~~~~~~ 75 (204)
T TIGR01484 1 LLFFDLDGTLLD---PNAHELSPETIEALERL-REAGVKVVLVTGRSLAEIKELLKQL-PLPLIAENGALIFYPGEILYI 75 (204)
T ss_pred CEEEeCcCCCcC---CCCCcCCHHHHHHHHHH-HHCCCEEEEECCCCHHHHHHHHHhC-CCCEEECCCcEEEECCEEEEE
Confidence 589999999998 55 78999999999998 6668999999999999999999774 478999999999987766665
Q ss_pred ecCCCCcccHH---HHHHHHHHHHhhcCCcceEEecccceEEeeecCCCCCCchhHHHHHHHHHHHhcC-CCeEEE-EcC
Q 003025 672 NCGQSVDFGWI---QIAEPVMKLYTESTDGSYIEIKESALVWHHRDADPGFGSSQAKELLDHLESVLAN-EPAAVK-SGQ 746 (856)
Q Consensus 672 ~~~~~~~~~w~---~~v~~i~~~~~~~~~Gs~ie~k~~~l~~~~~~~dp~~~~~~a~el~~~L~~~l~~-~~~~v~-~g~ 746 (856)
. .......|. +.+...+..+.+.+++..++.+...+.+++... +.......++.+.++....+ ..+.+. ++.
T Consensus 76 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~ 152 (204)
T TIGR01484 76 E-PSDVFEEILGIKEEIGAELKSLSEHYVGTFIEDKAIAVAIHYVGA--ELGQELDSKMRERLEKIGRNDLELEAIYVGK 152 (204)
T ss_pred c-ccccHHHHHHhhhhcCceeeeeccccccceeecccceeeEEEecc--chhhHHHHHHHHHHHhhccccCcEEEEEecC
Confidence 4 111111111 122223444455667777888888899988764 11112234455555443221 335566 799
Q ss_pred eEEEEEeCCCCHHHHHHHHHHHhhhcCCCcceEEEEeCCchhHHHHHHcccc
Q 003025 747 FIVEVKPQGVSKGVVAEKIFTTMAESGRHADFVLCIGDDRSDEDMFEIIGNA 798 (856)
Q Consensus 747 ~~vEI~p~gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~ 798 (856)
.++||+|++++||.+++.+++++ +++++++++|||+.||++||+.++.+
T Consensus 153 ~~~ev~p~~~~K~~~~~~~~~~~---~~~~~~~~~~GD~~nD~~~~~~~~~~ 201 (204)
T TIGR01484 153 TDLEVLPAGVDKGSALQALLKEL---NGKRDEILAFGDSGNDEEMFEVAGLA 201 (204)
T ss_pred CEEEEecCCCChHHHHHHHHHHh---CCCHHHEEEEcCCHHHHHHHHHcCCc
Confidence 99999999999999999999999 99999999999999999999999864
|
The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear. |
| >PRK15484 lipopolysaccharide 1,2-N-acetylglucosaminetransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.4e-22 Score=229.40 Aligned_cols=269 Identities=20% Similarity=0.271 Sum_probs=198.2
Q ss_pred CCEEEEeCcccchHHHHHHhhcCCCeEEEEEccCCCChHHHhcCCchHHHHHHhHhCCEEcccCHHHHHHHHHHHHhhhC
Q 003025 201 DDYVWIHDYHLMVLPTFLRRRFTRLRMGFFLHSPFPSSEIYRTLPVREEILKALLNADLIGFHTFDYARHFLSCCSRMLG 280 (856)
Q Consensus 201 ~D~VwihDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~~~~lp~r~eil~~ll~~dligf~t~~~~~~Fl~~~~r~lg 280 (856)
.|+|+||+.. .+-..+++++|++++.+.+|..|. ++.++ .++.|-+.+. +.+.++.. .+
T Consensus 100 ~~vi~v~~~~--~~~~~~~~~~~~~~~v~~~h~~~~-~~~~~-------------~~~~ii~~S~-~~~~~~~~---~~- 158 (380)
T PRK15484 100 DSVIVIHNSM--KLYRQIRERAPQAKLVMHMHNAFE-PELLD-------------KNAKIIVPSQ-FLKKFYEE---RL- 158 (380)
T ss_pred CcEEEEeCcH--HhHHHHHhhCCCCCEEEEEecccC-hhHhc-------------cCCEEEEcCH-HHHHHHHh---hC-
Confidence 5999999843 344667888999999999997763 22221 3566666664 44444321 10
Q ss_pred ceecccCceeeEEECCEEEEEEEeecccCchHHHHHhcCchHHHHHHHHHHHc---CCCeEEEeccCccccCCHHHHHHH
Q 003025 281 LEYQSKRGYIGLEYYGRTVGIKIMPVGIHMGQIESVLRLADKDWRVQELKQQF---EGKTVLLGVDDMDIFKGVDLKLLA 357 (856)
Q Consensus 281 ~~~~~~~~~~~~~~~gr~~~i~i~p~GId~~~~~~~~~~~~~~~~~~~l~~~~---~~k~iil~VdRld~~KGi~~~l~A 357 (856)
...++.++|+|||...|.+. . ...+++++ .++++|+++||+.+.||+..+++|
T Consensus 159 ----------------~~~~i~vIpngvd~~~~~~~-----~---~~~~~~~~~~~~~~~~il~~Grl~~~Kg~~~Li~A 214 (380)
T PRK15484 159 ----------------PNADISIVPNGFCLETYQSN-----P---QPNLRQQLNISPDETVLLYAGRISPDKGILLLMQA 214 (380)
T ss_pred ----------------CCCCEEEecCCCCHHHcCCc-----c---hHHHHHHhCCCCCCeEEEEeccCccccCHHHHHHH
Confidence 01235678999998877521 1 11233333 367899999999999999999999
Q ss_pred HHHHHHhCCCCcCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCcccEEEEcCCCCHHHHHHHHHhcceee
Q 003025 358 MEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDKPVTLSERAAYYTIAECVV 437 (856)
Q Consensus 358 ~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~~~~lv~~IN~~~~~~~~~pvv~~~~~v~~~el~aly~~ADv~v 437 (856)
+.++.+++|+++ |+++|.+......+..++++++++++.+.+. .+.+.+.++.+++.++|+.||+||
T Consensus 215 ~~~l~~~~p~~~----lvivG~g~~~~~~~~~~~~~~l~~~~~~l~~---------~v~~~G~~~~~~l~~~~~~aDv~v 281 (380)
T PRK15484 215 FEKLATAHSNLK----LVVVGDPTASSKGEKAAYQKKVLEAAKRIGD---------RCIMLGGQPPEKMHNYYPLADLVV 281 (380)
T ss_pred HHHHHHhCCCeE----EEEEeCCccccccchhHHHHHHHHHHHhcCC---------cEEEeCCCCHHHHHHHHHhCCEEE
Confidence 999999999765 8888865432222334566777777666432 235677899999999999999999
Q ss_pred eccc-cccCCCcccceeeeecCCCCCCCCCCCCCCCCceEEecCCcccccccC---Cce-eeCCCCHHHHHHHHHHHHcC
Q 003025 438 VTAV-RDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIGCSPSLS---GAI-RVNPWNIEATAEAMHEAIQM 512 (856)
Q Consensus 438 vtS~-~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~al-~VnP~d~~~~A~ai~~aL~m 512 (856)
+||. .||||++.+|||||+. |+|+|..+|+.+.+. .|+ +++|.|++++|++|.+++++
T Consensus 282 ~pS~~~E~f~~~~lEAma~G~-----------------PVI~s~~gg~~Eiv~~~~~G~~l~~~~d~~~la~~I~~ll~d 344 (380)
T PRK15484 282 VPSQVEEAFCMVAVEAMAAGK-----------------PVLASTKGGITEFVLEGITGYHLAEPMTSDSIISDINRTLAD 344 (380)
T ss_pred eCCCCccccccHHHHHHHcCC-----------------CEEEeCCCCcHhhcccCCceEEEeCCCCHHHHHHHHHHHHcC
Confidence 9997 5999999999999954 999999999888773 366 67899999999999999986
Q ss_pred CHHHHHHHHHHHhhhh-hcCCHHHHHHHHHHHHHH
Q 003025 513 NEAEKQLRHEKHYRYV-STHDVAYWARSFFQDMER 546 (856)
Q Consensus 513 ~~~er~~r~~~~~~~v-~~~~~~~W~~~~l~~l~~ 546 (856)
++ +..+.++.++++ ..+++...++++++.++.
T Consensus 345 ~~--~~~~~~~ar~~~~~~fsw~~~a~~~~~~l~~ 377 (380)
T PRK15484 345 PE--LTQIAEQAKDFVFSKYSWEGVTQRFEEQIHN 377 (380)
T ss_pred HH--HHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence 64 344556666654 668999999988887764
|
|
| >PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.91 E-value=4e-23 Score=222.80 Aligned_cols=222 Identities=19% Similarity=0.267 Sum_probs=148.1
Q ss_pred CcEEEEEecCCCCCCCCCCCCCCCHHHHHHHHHHHhhCCCeEEEecCCChhhHHHhhcCCC-CccEEeeCCEEEEeC-CC
Q 003025 590 KSRAILFDYDGTVMPQTSINKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSPCK-KLGIAAEHGYFMRWS-AD 667 (856)
Q Consensus 590 ~~rlI~~DlDGTLl~~~~~~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~~~-~lgliaenG~~I~~~-~~ 667 (856)
++|+|++|+||||++ .++.++++++++|+++ +++|+.|+|||||+...+.+.+..+. ..++++.||+.|+.. ++
T Consensus 2 ~~kli~~DlDGTLl~---~~~~i~~~~~~ai~~~-~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~i~d~~~~ 77 (272)
T PRK10530 2 TYRVIALDLDGTLLT---PKKTILPESLEALARA-REAGYKVIIVTGRHHVAIHPFYQALALDTPAICCNGTYLYDYQAK 77 (272)
T ss_pred CccEEEEeCCCceEC---CCCccCHHHHHHHHHH-HHCCCEEEEEcCCChHHHHHHHHhcCCCCCEEEcCCcEEEecCCC
Confidence 379999999999999 7888999999999996 88999999999999999998887764 345899999999863 33
Q ss_pred c-ceEecCCCCcccHHHHHHHHHHHHhhcC--------CcceEEecc--c--ceEEe----------eecCCC-------
Q 003025 668 E-EWQNCGQSVDFGWIQIAEPVMKLYTEST--------DGSYIEIKE--S--ALVWH----------HRDADP------- 717 (856)
Q Consensus 668 ~-~w~~~~~~~~~~w~~~v~~i~~~~~~~~--------~Gs~ie~k~--~--~l~~~----------~~~~dp------- 717 (856)
. .+...++ .+.+.++++...+.. .+.+..... . ...+. +...++
T Consensus 78 ~~l~~~~l~------~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (272)
T PRK10530 78 KVLEADPLP------VQQALQVIEMLDEHQIHGLMYVDDAMLYEHPTGHVIRTLNWAQTLPPEQRPTFTQVDSLAQAARQ 151 (272)
T ss_pred EEEEecCCC------HHHHHHHHHHHHhCCcEEEEEcCCceEecCchHHHHHHhhhhhccchhcccceEEcccHHHHHhh
Confidence 3 2332222 123333333322211 011111000 0 00000 000000
Q ss_pred -C--C--Cc-----hhHHHHHHHHHHHhcCCCeEEEEcCeEEEEEeCCCCHHHHHHHHHHHhhhcCCCcceEEEEeCCch
Q 003025 718 -G--F--GS-----SQAKELLDHLESVLANEPAAVKSGQFIVEVKPQGVSKGVVAEKIFTTMAESGRHADFVLCIGDDRS 787 (856)
Q Consensus 718 -~--~--~~-----~~a~el~~~L~~~l~~~~~~v~~g~~~vEI~p~gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~N 787 (856)
. + .. ....++.+.+.+.+. .....++..++||.|.++|||.+++++++++ |++++++++|||+.|
T Consensus 152 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~--~~~~~s~~~~~ei~~~~~~K~~~l~~l~~~~---gi~~~e~i~~GD~~N 226 (272)
T PRK10530 152 VNAIWKFALTHEDLPQLQHFAKHVEHELG--LECEWSWHDQVDIARKGNSKGKRLTQWVEAQ---GWSMKNVVAFGDNFN 226 (272)
T ss_pred cCCcEEEEEecCCHHHHHHHHHHHhhhcC--ceEEEecCceEEEecCCCChHHHHHHHHHHc---CCCHHHeEEeCCChh
Confidence 0 0 00 011222222222211 1233455678999999999999999999999 999999999999999
Q ss_pred hHHHHHHccccccCCCCCCCccEEEEEeCCC----ccccceEcC--ChhHHHHHHHHHH
Q 003025 788 DEDMFEIIGNATSSGVLSSNASVFACTVGQK----PSKAKYYLD--DAAEVVTMLEALA 840 (856)
Q Consensus 788 D~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~----~s~A~y~l~--~~~eV~~~L~~L~ 840 (856)
|++||+.+|. +|+||+. +..|+|++. +.++|.++|+++.
T Consensus 227 Di~m~~~ag~--------------~vamgna~~~lk~~Ad~v~~~n~~dGv~~~l~~~~ 271 (272)
T PRK10530 227 DISMLEAAGL--------------GVAMGNADDAVKARADLVIGDNTTPSIAEFIYSHV 271 (272)
T ss_pred hHHHHHhcCc--------------eEEecCchHHHHHhCCEEEecCCCCcHHHHHHHHh
Confidence 9999999985 5777775 467888874 5788999998864
|
|
| >PLN02939 transferase, transferring glycosyl groups | Back alignment and domain information |
|---|
Probab=99.91 E-value=3.2e-22 Score=238.34 Aligned_cols=320 Identities=14% Similarity=0.126 Sum_probs=215.4
Q ss_pred hHHHHHHHHHHHHHHHHHH-cCCCCCEEEEeCcccchHHHHHHhh-----cCCCeEEEEEccC-----CCChHHHhc-CC
Q 003025 178 LWEAYVSANKIFSQRVIEV-INPEDDYVWIHDYHLMVLPTFLRRR-----FTRLRMGFFLHSP-----FPSSEIYRT-LP 245 (856)
Q Consensus 178 ~w~~Y~~vN~~fa~~i~~~-~~~~~D~VwihDyhl~llp~~lr~~-----~~~~~i~~flH~P-----fP~~e~~~~-lp 245 (856)
....|.-+.+..++-+... .+| |||++||+|-.++|.++.+. +.++++.|++|-- ||...+..+ +|
T Consensus 589 n~~RF~~FsrAaLe~~~~~~~~P--DIIH~HDW~TaLV~pll~~~y~~~~~~~~ktVfTIHNl~yQG~f~~~~l~~lGL~ 666 (977)
T PLN02939 589 DFKRFSYFSRAALELLYQSGKKP--DIIHCHDWQTAFVAPLYWDLYAPKGFNSARICFTCHNFEYQGTAPASDLASCGLD 666 (977)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCC--CEEEECCccHHHHHHHHHHHHhhccCCCCcEEEEeCCCcCCCcCCHHHHHHcCCC
Confidence 3344555555555555432 355 89999999999985544432 4568999999964 332222111 22
Q ss_pred ch---------------HHHH-HHhHhCCEEcccCHHHHHHHHHHHHhhhCceecccCceeeEEECCEEEEEEEeecccC
Q 003025 246 VR---------------EEIL-KALLNADLIGFHTFDYARHFLSCCSRMLGLEYQSKRGYIGLEYYGRTVGIKIMPVGIH 309 (856)
Q Consensus 246 ~r---------------~eil-~~ll~~dligf~t~~~~~~Fl~~~~r~lg~~~~~~~~~~~~~~~gr~~~i~i~p~GId 309 (856)
+. --++ -|+..||.|-.-++.|++.-++ ..--|++. .+..+..++.++|+|||
T Consensus 667 ~~~l~~~d~le~~~~~~iN~LK~GIv~AD~VtTVSptYA~EI~t--e~G~GL~~---------~L~~~~~Kl~gIlNGID 735 (977)
T PLN02939 667 VHQLDRPDRMQDNAHGRINVVKGAIVYSNIVTTVSPTYAQEVRS--EGGRGLQD---------TLKFHSKKFVGILNGID 735 (977)
T ss_pred HHHccChhhhhhccCCchHHHHHHHHhCCeeEeeeHHHHHHHHH--HhccchHH---------HhccccCCceEEeccee
Confidence 11 1123 3567789888888888877654 11111110 12234557788999999
Q ss_pred chHHHHHhcC-----------chHHHHHHHHHHHcC------CCeEEEeccCccccCCHHHHHHHHHHHHHhCCCCcCce
Q 003025 310 MGQIESVLRL-----------ADKDWRVQELKQQFE------GKTVLLGVDDMDIFKGVDLKLLAMEHLLKQHPKWQGRA 372 (856)
Q Consensus 310 ~~~~~~~~~~-----------~~~~~~~~~l~~~~~------~k~iil~VdRld~~KGi~~~l~A~~~ll~~~p~~~~~v 372 (856)
.+.|.+.... .........+++++. +.++|++|||+++.||+..+++|+.++++ ++ +
T Consensus 736 ~e~wnPatD~~L~~~Ys~~dl~GK~~nK~aLRkelGL~~~d~d~pLIg~VGRL~~QKGiDlLleA~~~Ll~--~d----v 809 (977)
T PLN02939 736 TDTWNPSTDRFLKVQYNANDLQGKAANKAALRKQLGLSSADASQPLVGCITRLVPQKGVHLIRHAIYKTAE--LG----G 809 (977)
T ss_pred hhhcCCccccccccccChhhhhhhhhhhHHHHHHhCCCcccccceEEEEeecCCcccChHHHHHHHHHHhh--cC----C
Confidence 9988653210 001122345677762 35899999999999999999999998875 23 4
Q ss_pred EEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCcccEEEEcCCCCHHHHHHHHHhcceeeeccccccCCCcccce
Q 003025 373 VLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDKPVTLSERAAYYTIAECVVVTAVRDGMNLTPYEY 452 (856)
Q Consensus 373 vLvqi~~p~r~~~~~~~~l~~~~~~lv~~IN~~~~~~~~~pvv~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea 452 (856)
.||++|. |++ ..+++++.+++.+.+. .+.+.+.+.++......+|+.||+||+||.+|||||+++||
T Consensus 810 qLVIvGd-----Gp~-~~~e~eL~~La~~l~l-------~drV~FlG~~de~lah~IYAaADIFLmPSr~EPfGLvqLEA 876 (977)
T PLN02939 810 QFVLLGS-----SPV-PHIQREFEGIADQFQS-------NNNIRLILKYDEALSHSIYAASDMFIIPSMFEPCGLTQMIA 876 (977)
T ss_pred EEEEEeC-----CCc-HHHHHHHHHHHHHcCC-------CCeEEEEeccCHHHHHHHHHhCCEEEECCCccCCcHHHHHH
Confidence 4777774 322 2355666677666432 22344556677777889999999999999999999999999
Q ss_pred eeeecCCCCCCCCCCCCCCCCceEEecCCcccccccC------------CceeeCCCCHHHHHHHHHHHHc---CCHHHH
Q 003025 453 IVCRQGVSGSESSSESSAPKKSMLVVSEFIGCSPSLS------------GAIRVNPWNIEATAEAMHEAIQ---MNEAEK 517 (856)
Q Consensus 453 ~a~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~------------~al~VnP~d~~~~A~ai~~aL~---m~~~er 517 (856)
|+|+ .|+|++..+|+.+.+. +|++|+|.|+++++++|.+++. .+++.+
T Consensus 877 MAyG-----------------tPPVVs~vGGL~DtV~d~d~e~i~~eg~NGfLf~~~D~eaLa~AL~rAL~~~~~dpe~~ 939 (977)
T PLN02939 877 MRYG-----------------SVPIVRKTGGLNDSVFDFDDETIPVELRNGFTFLTPDEQGLNSALERAFNYYKRKPEVW 939 (977)
T ss_pred HHCC-----------------CCEEEecCCCCcceeecCCccccccCCCceEEecCCCHHHHHHHHHHHHHHhccCHHHH
Confidence 9994 4899999999988762 4899999999999999999986 234443
Q ss_pred HHHHHHHhhhhhcCCHHHHHHHHHHHHHHHH
Q 003025 518 QLRHEKHYRYVSTHDVAYWARSFFQDMERTC 548 (856)
Q Consensus 518 ~~r~~~~~~~v~~~~~~~W~~~~l~~l~~~~ 548 (856)
+...++ .....+++...++.+.+-..++.
T Consensus 940 ~~L~~~--am~~dFSWe~~A~qYeeLY~~ll 968 (977)
T PLN02939 940 KQLVQK--DMNIDFSWDSSASQYEELYQRAV 968 (977)
T ss_pred HHHHHH--HHHhcCCHHHHHHHHHHHHHHHH
Confidence 333332 23367899999998876665554
|
|
| >TIGR02472 sucr_P_syn_N sucrose-phosphate synthase, putative, glycosyltransferase domain | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.3e-22 Score=233.84 Aligned_cols=314 Identities=17% Similarity=0.135 Sum_probs=196.6
Q ss_pred HHHHHHHHHHHHHHHHHHc-CCCCCEEEEeCcccchHHHHHHhhcCCCeEEEEEccCCCChH--HHh------------c
Q 003025 179 WEAYVSANKIFSQRVIEVI-NPEDDYVWIHDYHLMVLPTFLRRRFTRLRMGFFLHSPFPSSE--IYR------------T 243 (856)
Q Consensus 179 w~~Y~~vN~~fa~~i~~~~-~~~~D~VwihDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e--~~~------------~ 243 (856)
|.....+...+...+.+.. +| |+|++|+++-.++..++++.. ++|+.+..|....... +.. .
T Consensus 94 ~~~~~~~~~~l~~~~~~~~~~~--DvIH~h~~~~~~~~~~~~~~~-~~p~V~t~H~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (439)
T TIGR02472 94 WPYLDELADNLLQHLRQQGHLP--DLIHAHYADAGYVGARLSRLL-GVPLIFTGHSLGREKRRRLLAAGLKPQQIEKQYN 170 (439)
T ss_pred hhhHHHHHHHHHHHHHHcCCCC--CEEEEcchhHHHHHHHHHHHh-CCCEEEecccccchhhhhcccCCCChhhhhhhcc
Confidence 4333444444444443322 35 999999988666666666544 6899999997543211 000 0
Q ss_pred CCchHH-HHHHhHhCCEEcccCHHHHHHHHHHHHhhhCceecccCceeeEEE-CCEEEEEEEeecccCchHHHHHhcCch
Q 003025 244 LPVREE-ILKALLNADLIGFHTFDYARHFLSCCSRMLGLEYQSKRGYIGLEY-YGRTVGIKIMPVGIHMGQIESVLRLAD 321 (856)
Q Consensus 244 lp~r~e-il~~ll~~dligf~t~~~~~~Fl~~~~r~lg~~~~~~~~~~~~~~-~gr~~~i~i~p~GId~~~~~~~~~~~~ 321 (856)
+..+-. ....+-.+|.|...+...++.-+. .+ .-...++.++|+|||++.|.+....+.
T Consensus 171 ~~~~~~~~~~~~~~ad~ii~~s~~~~~~~~~-------------------~~~~~~~~ki~vIpnGvd~~~f~~~~~~~~ 231 (439)
T TIGR02472 171 ISRRIEAEEETLAHASLVITSTHQEIEEQYA-------------------LYDSYQPERMQVIPPGVDLSRFYPPQSSEE 231 (439)
T ss_pred hHHHHHHHHHHHHhCCEEEECCHHHHHHHHH-------------------hccCCCccceEEECCCcChhhcCCCCcccc
Confidence 000000 011233455544433322111110 01 112346778999999998864322111
Q ss_pred HHHHHHHHHHHc--CCCeEEEeccCccccCCHHHHHHHHHHHHHhCCCCcCceEEEEEecCCCCCchhHH----HHHHHH
Q 003025 322 KDWRVQELKQQF--EGKTVLLGVDDMDIFKGVDLKLLAMEHLLKQHPKWQGRAVLVQIANPARGRGKDLE----EIQAEI 395 (856)
Q Consensus 322 ~~~~~~~l~~~~--~~k~iil~VdRld~~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~----~l~~~~ 395 (856)
.......+++.. +++++|++|||+++.||+..+|+||.++.+..+.. ++++ .+|... ..+.++ ++.+++
T Consensus 232 ~~~~~~~~~~~~~~~~~~~i~~vGrl~~~Kg~~~li~A~~~l~~~~~~~--~l~l-i~G~g~--~~~~l~~~~~~~~~~~ 306 (439)
T TIGR02472 232 TSEIDNLLAPFLKDPEKPPILAISRPDRRKNIPSLVEAYGRSPKLQEMA--NLVL-VLGCRD--DIRKMESQQREVLQKV 306 (439)
T ss_pred chhHHHHHHhhccccCCcEEEEEcCCcccCCHHHHHHHHHhChhhhhhc--cEEE-EeCCcc--ccccccHHHHHHHHHH
Confidence 111111222221 46789999999999999999999998643211111 2332 234211 111111 222334
Q ss_pred HHHHHHHhcccCCCCcccEEEEcCCCCHHHHHHHHHhc----ceeeeccccccCCCcccceeeeecCCCCCCCCCCCCCC
Q 003025 396 HATCKRINETFGRPGYEPVVFIDKPVTLSERAAYYTIA----ECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAP 471 (856)
Q Consensus 396 ~~lv~~IN~~~~~~~~~pvv~~~~~v~~~el~aly~~A----Dv~vvtS~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~ 471 (856)
..+++++ ++...+.|.+.++.+++.++|+.| |+||+||.+||||++++|||||+.
T Consensus 307 ~~~~~~~-------~l~~~V~f~g~~~~~~~~~~~~~a~~~~Dv~v~pS~~E~fg~~~lEAma~G~-------------- 365 (439)
T TIGR02472 307 LLLIDRY-------DLYGKVAYPKHHRPDDVPELYRLAARSRGIFVNPALTEPFGLTLLEAAACGL-------------- 365 (439)
T ss_pred HHHHHHc-------CCCceEEecCCCCHHHHHHHHHHHhhcCCEEecccccCCcccHHHHHHHhCC--------------
Confidence 4444442 344566788889999999999988 999999999999999999999955
Q ss_pred CCceEEecCCcccccccC---CceeeCCCCHHHHHHHHHHHHcCCHHHHHHHHHHHhhhh-hcCCHHHHHHHHHHHH
Q 003025 472 KKSMLVVSEFIGCSPSLS---GAIRVNPWNIEATAEAMHEAIQMNEAEKQLRHEKHYRYV-STHDVAYWARSFFQDM 544 (856)
Q Consensus 472 ~~g~lV~Se~~G~~~~l~---~al~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v-~~~~~~~W~~~~l~~l 544 (856)
|+|+|+.+|+.+.+. +|++|+|.|++++|++|.++++. +.+++...++.++++ ..+++..-++++++-|
T Consensus 366 ---PvV~s~~gg~~eiv~~~~~G~lv~~~d~~~la~~i~~ll~~-~~~~~~~~~~a~~~~~~~fsw~~~~~~~~~l~ 438 (439)
T TIGR02472 366 ---PIVATDDGGPRDIIANCRNGLLVDVLDLEAIASALEDALSD-SSQWQLWSRNGIEGVRRHYSWDAHVEKYLRIL 438 (439)
T ss_pred ---CEEEeCCCCcHHHhcCCCcEEEeCCCCHHHHHHHHHHHHhC-HHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHh
Confidence 999999999998884 48999999999999999999984 556666677777776 4588888888877654
|
This family consists of the N-terminal regions, or in some cases the entirety, of bacterial proteins closely related to plant sucrose-phosphate synthases (SPS). The C-terminal domain (TIGR02471), found with most members of this family, resembles both bona fide plant sucrose-phosphate phosphatases (SPP) and the SPP-like domain of plant SPS. At least two members of this family lack the SPP-like domain, which may have binding or regulatory rather than enzymatic activity by analogy to plant SPS. This enzyme produces sucrose 6-phosphate and UDP from UDP-glucose and D-fructose 6-phosphate, and may be encoded near the gene for fructokinase. |
| >PLN02316 synthase/transferase | Back alignment and domain information |
|---|
Probab=99.90 E-value=4.1e-22 Score=241.60 Aligned_cols=309 Identities=14% Similarity=0.115 Sum_probs=216.2
Q ss_pred hHHHHHHHHHHHHHHHHHH-cCCCCCEEEEeCcccchHHHHHHhh-----cCCCeEEEEEccCCCChHHHhcCCchHHHH
Q 003025 178 LWEAYVSANKIFSQRVIEV-INPEDDYVWIHDYHLMVLPTFLRRR-----FTRLRMGFFLHSPFPSSEIYRTLPVREEIL 251 (856)
Q Consensus 178 ~w~~Y~~vN~~fa~~i~~~-~~~~~D~VwihDyhl~llp~~lr~~-----~~~~~i~~flH~PfP~~e~~~~lp~r~eil 251 (856)
...-|...++..++.+... .+| |+|++||+|-.++|.++++. +.++++.+++|-.- | .+.-+-
T Consensus 688 d~~RF~~F~~Aale~l~~~~~~P--DIIHaHDW~talva~llk~~~~~~~~~~~p~V~TiHnl~-----~----~~n~lk 756 (1036)
T PLN02316 688 DGERFGFFCHAALEFLLQSGFHP--DIIHCHDWSSAPVAWLFKDHYAHYGLSKARVVFTIHNLE-----F----GANHIG 756 (1036)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCC--CEEEECCChHHHHHHHHHHhhhhhccCCCCEEEEeCCcc-----c----chhHHH
Confidence 3455555666666655432 345 99999999999999999875 35689999999531 1 112244
Q ss_pred HHhHhCCEEcccCHHHHHHHHHHHHhhhCceecccCceeeEEECCEEEEEEEeecccCchHHHHHhc--Cc-----h---
Q 003025 252 KALLNADLIGFHTFDYARHFLSCCSRMLGLEYQSKRGYIGLEYYGRTVGIKIMPVGIHMGQIESVLR--LA-----D--- 321 (856)
Q Consensus 252 ~~ll~~dligf~t~~~~~~Fl~~~~r~lg~~~~~~~~~~~~~~~gr~~~i~i~p~GId~~~~~~~~~--~~-----~--- 321 (856)
.++..||.|---++.|++..+.. +. ...+..++.++|+|||+..|.+... .| +
T Consensus 757 ~~l~~AD~ViTVS~tya~EI~~~-----~~------------l~~~~~Kl~vI~NGID~~~w~P~tD~~lp~~y~~~~~~ 819 (1036)
T PLN02316 757 KAMAYADKATTVSPTYSREVSGN-----SA------------IAPHLYKFHGILNGIDPDIWDPYNDNFIPVPYTSENVV 819 (1036)
T ss_pred HHHHHCCEEEeCCHHHHHHHHhc-----cC------------cccccCCEEEEECCccccccCCcccccccccCCchhhh
Confidence 56778999988888887766531 00 0112346778999999988754311 00 0
Q ss_pred --HHHHHHHHHHHcC----CCeEEEeccCccccCCHHHHHHHHHHHHHhCCCCcCceEEEEEecCCCCCchhHHHHHHHH
Q 003025 322 --KDWRVQELKQQFE----GKTVLLGVDDMDIFKGVDLKLLAMEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEI 395 (856)
Q Consensus 322 --~~~~~~~l~~~~~----~k~iil~VdRld~~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~~ 395 (856)
.......+++++. +.++|++|+||++.||+..+++|+.++++. + +.||++|. |++ ..++.++
T Consensus 820 ~gK~~~k~~Lr~~lGL~~~d~plVg~VGRL~~qKGvdlLi~Al~~ll~~--~----~qlVIvG~-----Gpd-~~~e~~l 887 (1036)
T PLN02316 820 EGKRAAKEALQQRLGLKQADLPLVGIITRLTHQKGIHLIKHAIWRTLER--N----GQVVLLGS-----APD-PRIQNDF 887 (1036)
T ss_pred hhhhhhHHHHHHHhCCCcccCeEEEEEeccccccCHHHHHHHHHHHhhc--C----cEEEEEeC-----CCC-HHHHHHH
Confidence 1122345666662 578999999999999999999999999863 2 44676764 333 3456778
Q ss_pred HHHHHHHhcccCCCCcccEEEEcCCCCHHHHHHHHHhcceeeeccccccCCCcccceeeeecCCCCCCCCCCCCCCCCce
Q 003025 396 HATCKRINETFGRPGYEPVVFIDKPVTLSERAAYYTIAECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSM 475 (856)
Q Consensus 396 ~~lv~~IN~~~~~~~~~pvv~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~g~ 475 (856)
.+++.+++..+. ..+.|.+..+......+|++||+||+||..|||||+.+|||+|+ .|
T Consensus 888 ~~La~~Lg~~~~-----~rV~f~g~~de~lah~iyaaADiflmPS~~EP~GLvqLEAMa~G-----------------tp 945 (1036)
T PLN02316 888 VNLANQLHSSHH-----DRARLCLTYDEPLSHLIYAGADFILVPSIFEPCGLTQLTAMRYG-----------------SI 945 (1036)
T ss_pred HHHHHHhCccCC-----CeEEEEecCCHHHHHHHHHhCcEEEeCCcccCccHHHHHHHHcC-----------------CC
Confidence 888887765442 23334344444444589999999999999999999999999994 48
Q ss_pred EEecCCccccccc-C---------------CceeeCCCCHHHHHHHHHHHHcCCHHHHHHHHHHHhhhh-hcCCHHHHHH
Q 003025 476 LVVSEFIGCSPSL-S---------------GAIRVNPWNIEATAEAMHEAIQMNEAEKQLRHEKHYRYV-STHDVAYWAR 538 (856)
Q Consensus 476 lV~Se~~G~~~~l-~---------------~al~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v-~~~~~~~W~~ 538 (856)
+|++..+|..+.+ + +|++|+|.|++++++||.++|......+....+..++.+ ..+++..-++
T Consensus 946 pVvs~vGGL~DtV~d~d~~~~~~~~~g~~~tGflf~~~d~~aLa~AL~raL~~~~~~~~~~~~~~r~~m~~dFSW~~~A~ 1025 (1036)
T PLN02316 946 PVVRKTGGLFDTVFDVDHDKERAQAQGLEPNGFSFDGADAAGVDYALNRAISAWYDGRDWFNSLCKRVMEQDWSWNRPAL 1025 (1036)
T ss_pred eEEEcCCCcHhhccccccccccccccccCCceEEeCCCCHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHhhCCHHHHHH
Confidence 9999999999987 2 389999999999999999999854332333233334443 4588888888
Q ss_pred HHHHHHHHHH
Q 003025 539 SFFQDMERTC 548 (856)
Q Consensus 539 ~~l~~l~~~~ 548 (856)
.+++-.+++.
T Consensus 1026 ~Y~~LY~~a~ 1035 (1036)
T PLN02316 1026 DYMELYHSAR 1035 (1036)
T ss_pred HHHHHHHHHh
Confidence 8877665543
|
|
| >PRK00654 glgA glycogen synthase; Provisional | Back alignment and domain information |
|---|
Probab=99.90 E-value=2.5e-22 Score=233.19 Aligned_cols=293 Identities=19% Similarity=0.237 Sum_probs=193.4
Q ss_pred CEEEEeCcccchHHHHHHhhc----CCCeEEEEEccCCCC----hHHHhcC--Cch-------------HHHHHHhHhCC
Q 003025 202 DYVWIHDYHLMVLPTFLRRRF----TRLRMGFFLHSPFPS----SEIYRTL--PVR-------------EEILKALLNAD 258 (856)
Q Consensus 202 D~VwihDyhl~llp~~lr~~~----~~~~i~~flH~PfP~----~e~~~~l--p~r-------------~eil~~ll~~d 258 (856)
|+|++||+|-.++|.++++++ .++++.++.|..-.. .+.+..+ |+. .-+-.++..||
T Consensus 120 DiiH~h~w~~~~~~~~l~~~~~~~~~~~~~v~TiH~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad 199 (466)
T PRK00654 120 DIVHAHDWHTGLIPALLKEKYWRGYPDIKTVFTIHNLAYQGLFPAEILGELGLPAEAFHLEGLEFYGQISFLKAGLYYAD 199 (466)
T ss_pred ceEEECCcHHHHHHHHHHHhhhccCCCCCEEEEcCCCcCCCcCCHHHHHHcCCChHHcCchhhhcCCcccHHHHHHHhcC
Confidence 999999999999999998663 468999999976211 1111111 110 11122445556
Q ss_pred EEcccCHHHHHHHHHHHHhhhCceecccCceeeEE--ECCEEEEEEEeecccCchHHHHHhcC-----------chHHHH
Q 003025 259 LIGFHTFDYARHFLSCCSRMLGLEYQSKRGYIGLE--YYGRTVGIKIMPVGIHMGQIESVLRL-----------ADKDWR 325 (856)
Q Consensus 259 ligf~t~~~~~~Fl~~~~r~lg~~~~~~~~~~~~~--~~gr~~~i~i~p~GId~~~~~~~~~~-----------~~~~~~ 325 (856)
.|---++.|++..... ..| .++. +..+..++.++|+|||.+.|.+.... ......
T Consensus 200 ~vitvS~~~~~ei~~~---~~~---------~gl~~~~~~~~~ki~vI~NGid~~~~~p~~~~~~~~~~~~~~~~~k~~~ 267 (466)
T PRK00654 200 RVTTVSPTYAREITTP---EFG---------YGLEGLLRARSGKLSGILNGIDYDIWNPETDPLLAANYSADDLEGKAEN 267 (466)
T ss_pred cCeeeCHHHHHHhccc---cCC---------cChHHHHHhcccCceEecCCCCccccCCccCcccccccChhhhhchHHH
Confidence 5555555444432210 000 0000 01133468889999999988643110 011122
Q ss_pred HHHHHHHcC----CCeEEEeccCccccCCHHHHHHHHHHHHHhCCCCcCceEEEEEecCCCCCchhHHHHHHHHHHHHHH
Q 003025 326 VQELKQQFE----GKTVLLGVDDMDIFKGVDLKLLAMEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKR 401 (856)
Q Consensus 326 ~~~l~~~~~----~k~iil~VdRld~~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~~~~lv~~ 401 (856)
.+.+++++. ++++|++|||+++.||+..+++|+++++++ + +.|+.+|.+ + ..+++++++++.+
T Consensus 268 k~~l~~~~gl~~~~~~~i~~vGRl~~~KG~~~li~a~~~l~~~--~----~~lvivG~g-----~--~~~~~~l~~l~~~ 334 (466)
T PRK00654 268 KRALQERFGLPDDDAPLFAMVSRLTEQKGLDLVLEALPELLEQ--G----GQLVLLGTG-----D--PELEEAFRALAAR 334 (466)
T ss_pred HHHHHHHhCCCCCCCcEEEEeeccccccChHHHHHHHHHHHhc--C----CEEEEEecC-----c--HHHHHHHHHHHHH
Confidence 345666662 568999999999999999999999998764 2 447777742 1 2345566666665
Q ss_pred HhcccCCCCcccEEEEcCCCCHHHHHHHHHhcceeeeccccccCCCcccceeeeecCCCCCCCCCCCCCCCCceEEecCC
Q 003025 402 INETFGRPGYEPVVFIDKPVTLSERAAYYTIAECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEF 481 (856)
Q Consensus 402 IN~~~~~~~~~pvv~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~g~lV~Se~ 481 (856)
.+. .++++.+. +.+....+|+.||+||+||.+||||++.+|||+|+ .|+|+|+.
T Consensus 335 ~~~--------~v~~~~g~-~~~~~~~~~~~aDv~v~PS~~E~~gl~~lEAma~G-----------------~p~V~~~~ 388 (466)
T PRK00654 335 YPG--------KVGVQIGY-DEALAHRIYAGADMFLMPSRFEPCGLTQLYALRYG-----------------TLPIVRRT 388 (466)
T ss_pred CCC--------cEEEEEeC-CHHHHHHHHhhCCEEEeCCCCCCchHHHHHHHHCC-----------------CCEEEeCC
Confidence 432 14444543 55667799999999999999999999999999994 49999999
Q ss_pred ccccccc-C--------CceeeCCCCHHHHHHHHHHHHcC--CHHHHHHHHHHHhhhhhcCCHHHHHHHHHHHHHHH
Q 003025 482 IGCSPSL-S--------GAIRVNPWNIEATAEAMHEAIQM--NEAEKQLRHEKHYRYVSTHDVAYWARSFFQDMERT 547 (856)
Q Consensus 482 ~G~~~~l-~--------~al~VnP~d~~~~A~ai~~aL~m--~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~l~~~ 547 (856)
+|+.+.+ . +|++|+|.|+++++++|.++|+. .++.++...++.. ...+++..-++++++-.+++
T Consensus 389 gG~~e~v~~~~~~~~~~~G~lv~~~d~~~la~~i~~~l~~~~~~~~~~~~~~~~~--~~~fsw~~~a~~~~~lY~~~ 463 (466)
T PRK00654 389 GGLADTVIDYNPEDGEATGFVFDDFNAEDLLRALRRALELYRQPPLWRALQRQAM--AQDFSWDKSAEEYLELYRRL 463 (466)
T ss_pred CCccceeecCCCCCCCCceEEeCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHh--ccCCChHHHHHHHHHHHHHH
Confidence 9999988 2 38999999999999999999863 2222222222222 25688888888877655544
|
|
| >TIGR03449 mycothiol_MshA UDP-N-acetylglucosamine: 1L-myo-inositol-1-phosphate 1-alpha-D-N-acetylglucosaminyltransferase | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.3e-21 Score=223.03 Aligned_cols=287 Identities=16% Similarity=0.157 Sum_probs=208.5
Q ss_pred CCEEEEeCcccchHHHHHHhhcCCCeEEEEEccCCCChHHHhc---CCc--hHHHH--HHhHhCCEEcccCHHHHHHHHH
Q 003025 201 DDYVWIHDYHLMVLPTFLRRRFTRLRMGFFLHSPFPSSEIYRT---LPV--REEIL--KALLNADLIGFHTFDYARHFLS 273 (856)
Q Consensus 201 ~D~VwihDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~~~~---lp~--r~eil--~~ll~~dligf~t~~~~~~Fl~ 273 (856)
.|+|++|++...+++.++++ ..++|+.+.+|..++-...+.. .|. ...++ ..+-.+|.+.+.+....+.+..
T Consensus 102 ~Diih~h~~~~~~~~~~~~~-~~~~p~v~t~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~d~vi~~s~~~~~~~~~ 180 (405)
T TIGR03449 102 YDLIHSHYWLSGQVGWLLRD-RWGVPLVHTAHTLAAVKNAALADGDTPEPEARRIGEQQLVDNADRLIANTDEEARDLVR 180 (405)
T ss_pred CCeEEechHHHHHHHHHHHH-hcCCCEEEeccchHHHHHHhccCCCCCchHHHHHHHHHHHHhcCeEEECCHHHHHHHHH
Confidence 39999998766555555554 4468899999975432221111 111 11222 2345789999999887777664
Q ss_pred HHHhhhCceecccCceeeEEECCEEEEEEEeecccCchHHHHHhcCchHHHHHHHHHHHc---CCCeEEEeccCccccCC
Q 003025 274 CCSRMLGLEYQSKRGYIGLEYYGRTVGIKIMPVGIHMGQIESVLRLADKDWRVQELKQQF---EGKTVLLGVDDMDIFKG 350 (856)
Q Consensus 274 ~~~r~lg~~~~~~~~~~~~~~~gr~~~i~i~p~GId~~~~~~~~~~~~~~~~~~~l~~~~---~~k~iil~VdRld~~KG 350 (856)
. .+. ...++.++|+|||.+.|.+. + ....+.++ .++++|+++||+.+.||
T Consensus 181 ~----~~~---------------~~~ki~vi~ngvd~~~~~~~---~-----~~~~~~~~~~~~~~~~i~~~G~l~~~K~ 233 (405)
T TIGR03449 181 H----YDA---------------DPDRIDVVAPGADLERFRPG---D-----RATERARLGLPLDTKVVAFVGRIQPLKA 233 (405)
T ss_pred H----cCC---------------ChhhEEEECCCcCHHHcCCC---c-----HHHHHHhcCCCCCCcEEEEecCCCcccC
Confidence 1 111 22356788999999887521 1 11233444 36789999999999999
Q ss_pred HHHHHHHHHHHHHhCCCCcCceEEEEEecCCCCCc-hhHHHHHHHHHHHHHHHhcccCCCCcccEEEEcCCCCHHHHHHH
Q 003025 351 VDLKLLAMEHLLKQHPKWQGRAVLVQIANPARGRG-KDLEEIQAEIHATCKRINETFGRPGYEPVVFIDKPVTLSERAAY 429 (856)
Q Consensus 351 i~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~-~~~~~l~~~~~~lv~~IN~~~~~~~~~pvv~~~~~v~~~el~al 429 (856)
+..+++|++++++++|+. ++.|+++|.+. +++ +..++ +++++++. +..+.+.+.|.++.+++..+
T Consensus 234 ~~~li~a~~~l~~~~~~~--~~~l~ivG~~~-~~g~~~~~~----l~~~~~~~-------~l~~~v~~~g~~~~~~~~~~ 299 (405)
T TIGR03449 234 PDVLLRAVAELLDRDPDR--NLRVIVVGGPS-GSGLATPDA----LIELAAEL-------GIADRVRFLPPRPPEELVHV 299 (405)
T ss_pred HHHHHHHHHHHHhhCCCc--ceEEEEEeCCC-CCcchHHHH----HHHHHHHc-------CCCceEEECCCCCHHHHHHH
Confidence 999999999999998873 47788888644 233 33333 44444443 33446677889999999999
Q ss_pred HHhcceeeeccccccCCCcccceeeeecCCCCCCCCCCCCCCCCceEEecCCcccccccC---CceeeCCCCHHHHHHHH
Q 003025 430 YTIAECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIGCSPSLS---GAIRVNPWNIEATAEAM 506 (856)
Q Consensus 430 y~~ADv~vvtS~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~al~VnP~d~~~~A~ai 506 (856)
|+.||+|++||..||||++++|||+|+. |+|+|..+|..+.+. .|++++|.|++++|++|
T Consensus 300 l~~ad~~v~ps~~E~~g~~~lEAma~G~-----------------Pvi~~~~~~~~e~i~~~~~g~~~~~~d~~~la~~i 362 (405)
T TIGR03449 300 YRAADVVAVPSYNESFGLVAMEAQACGT-----------------PVVAARVGGLPVAVADGETGLLVDGHDPADWADAL 362 (405)
T ss_pred HHhCCEEEECCCCCCcChHHHHHHHcCC-----------------CEEEecCCCcHhhhccCCceEECCCCCHHHHHHHH
Confidence 9999999999999999999999999954 999999999888773 38999999999999999
Q ss_pred HHHHcCCHHHHHHHHHHHhhhhhcCCHHHHHHHHHHHHHHH
Q 003025 507 HEAIQMNEAEKQLRHEKHYRYVSTHDVAYWARSFFQDMERT 547 (856)
Q Consensus 507 ~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~l~~~ 547 (856)
.++++. ++++....++.++.+..+++...++++++-..++
T Consensus 363 ~~~l~~-~~~~~~~~~~~~~~~~~fsw~~~~~~~~~~y~~~ 402 (405)
T TIGR03449 363 ARLLDD-PRTRIRMGAAAVEHAAGFSWAATADGLLSSYRDA 402 (405)
T ss_pred HHHHhC-HHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHH
Confidence 999974 4555555666777788899999998888766553
|
Members of this protein family, found exclusively in the Actinobacteria, are MshA, the glycosyltransferase of mycothiol biosynthesis. Mycothiol replaces glutathione in these species. |
| >PRK14098 glycogen synthase; Provisional | Back alignment and domain information |
|---|
Probab=99.90 E-value=2.9e-22 Score=233.03 Aligned_cols=319 Identities=14% Similarity=0.140 Sum_probs=212.7
Q ss_pred HhHHHHHHHHHHHHHHHHHH-cCCCCCEEEEeCcccchHHHHHHhhc------CCCeEEEEEccCC-----CChHHHhcC
Q 003025 177 SLWEAYVSANKIFSQRVIEV-INPEDDYVWIHDYHLMVLPTFLRRRF------TRLRMGFFLHSPF-----PSSEIYRTL 244 (856)
Q Consensus 177 ~~w~~Y~~vN~~fa~~i~~~-~~~~~D~VwihDyhl~llp~~lr~~~------~~~~i~~flH~Pf-----P~~e~~~~l 244 (856)
+....|.-.++..++.+.+. ++| |+|++||+|-.++|.+++++. .++|+.++.|... |.......+
T Consensus 119 d~~~rf~~f~~a~l~~~~~~~~~p--DiiH~hdw~t~l~~~~l~~~~~~~~~~~~~~~V~TiHn~~~qg~~~~~~~~~~~ 196 (489)
T PRK14098 119 GSAEKVIFFNVGVLETLQRLGWKP--DIIHCHDWYAGLVPLLLKTVYADHEFFKDIKTVLTIHNVYRQGVLPFKVFQKLL 196 (489)
T ss_pred cHHHHHHHHHHHHHHHHHhcCCCC--CEEEecCcHHHHHHHHHHHHhhhccccCCCCEEEEcCCCcccCCCCHHHHHHhC
Confidence 44566777777777766542 356 999999999999999998764 4789999999753 221111113
Q ss_pred Cch------------HHHHHHhHhCCEEcccCHHHHHHHHHHHHhhhCceecccCceeeEEECCEEEEEEEeecccCchH
Q 003025 245 PVR------------EEILKALLNADLIGFHTFDYARHFLSCCSRMLGLEYQSKRGYIGLEYYGRTVGIKIMPVGIHMGQ 312 (856)
Q Consensus 245 p~r------------~eil~~ll~~dligf~t~~~~~~Fl~~~~r~lg~~~~~~~~~~~~~~~gr~~~i~i~p~GId~~~ 312 (856)
|+. .-+-.++..||.|---++.|++.-++....-.|++. ....+..++.++|+|||.+.
T Consensus 197 ~~~~~~~~~~~~~~~n~lk~~i~~ad~VitVS~~~a~ei~~~~~~~~gl~~---------~l~~~~~kl~~I~NGID~~~ 267 (489)
T PRK14098 197 PEEVCSGLHREGDEVNMLYTGVEHADLLTTTSPRYAEEIAGDGEEAFGLDK---------VLEERKMRLHGILNGIDTRQ 267 (489)
T ss_pred CHHhhhhhhhcCCcccHHHHHHHhcCcceeeCHHHHHHhCcCCCCCcChHH---------HHHhcCCCeeEEeCCccccc
Confidence 321 112235667777766666666653320000001100 00113456788999999998
Q ss_pred HHHHhcCc-----------hHHHHHHHHHHHc-----CCCeEEEeccCccccCCHHHHHHHHHHHHHhCCCCcCceEEEE
Q 003025 313 IESVLRLA-----------DKDWRVQELKQQF-----EGKTVLLGVDDMDIFKGVDLKLLAMEHLLKQHPKWQGRAVLVQ 376 (856)
Q Consensus 313 ~~~~~~~~-----------~~~~~~~~l~~~~-----~~k~iil~VdRld~~KGi~~~l~A~~~ll~~~p~~~~~vvLvq 376 (856)
|.+..... ........+++++ +++++|++|+|+++.||+..+++|+.++++. + +.|++
T Consensus 268 ~~p~~d~~~~~~~~~~~~~~k~~~k~~l~~~lgl~~~~~~~~i~~vgRl~~~KG~d~li~a~~~l~~~--~----~~lvi 341 (489)
T PRK14098 268 WNPSTDKLIKKRYSIERLDGKLENKKALLEEVGLPFDEETPLVGVIINFDDFQGAELLAESLEKLVEL--D----IQLVI 341 (489)
T ss_pred cCCcccccccccCCcchhhhHHHHHHHHHHHhCCCCccCCCEEEEeccccccCcHHHHHHHHHHHHhc--C----cEEEE
Confidence 86432110 0011223445544 2567999999999999999999999998753 3 55888
Q ss_pred EecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCcccEEEEcCCCCHHHHHHHHHhcceeeeccccccCCCcccceeeee
Q 003025 377 IANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDKPVTLSERAAYYTIAECVVVTAVRDGMNLTPYEYIVCR 456 (856)
Q Consensus 377 i~~p~r~~~~~~~~l~~~~~~lv~~IN~~~~~~~~~pvv~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~a~~ 456 (856)
+|.+ + ..+++++++++++.. ..+.+.+.++.+++..+|+.||+||+||..||||++.+|||+|+
T Consensus 342 vG~G-----~--~~~~~~l~~l~~~~~---------~~V~~~g~~~~~~~~~~~a~aDi~l~PS~~E~~Gl~~lEAma~G 405 (489)
T PRK14098 342 CGSG-----D--KEYEKRFQDFAEEHP---------EQVSVQTEFTDAFFHLAIAGLDMLLMPGKIESCGMLQMFAMSYG 405 (489)
T ss_pred EeCC-----C--HHHHHHHHHHHHHCC---------CCEEEEEecCHHHHHHHHHhCCEEEeCCCCCCchHHHHHHHhCC
Confidence 8742 2 234566666666532 12345567888999999999999999999999999999999994
Q ss_pred cCCCCCCCCCCCCCCCCceEEecCCcccccccC-------CceeeCCCCHHHHHHHHHHHHcC--CHHHHHHHHHHHhhh
Q 003025 457 QGVSGSESSSESSAPKKSMLVVSEFIGCSPSLS-------GAIRVNPWNIEATAEAMHEAIQM--NEAEKQLRHEKHYRY 527 (856)
Q Consensus 457 ~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~-------~al~VnP~d~~~~A~ai~~aL~m--~~~er~~r~~~~~~~ 527 (856)
.|+|++..+|+.+.+. .|++|+|.|++++|++|.+++.+ .++..+...++ ..
T Consensus 406 -----------------~ppVv~~~GGl~d~v~~~~~~~~~G~l~~~~d~~~la~ai~~~l~~~~~~~~~~~~~~~--~~ 466 (489)
T PRK14098 406 -----------------TIPVAYAGGGIVETIEEVSEDKGSGFIFHDYTPEALVAKLGEALALYHDEERWEELVLE--AM 466 (489)
T ss_pred -----------------CCeEEecCCCCceeeecCCCCCCceeEeCCCCHHHHHHHHHHHHHHHcCHHHHHHHHHH--Hh
Confidence 4899999999988772 48999999999999999998742 22222222211 12
Q ss_pred hhcCCHHHHHHHHHHHHHHH
Q 003025 528 VSTHDVAYWARSFFQDMERT 547 (856)
Q Consensus 528 v~~~~~~~W~~~~l~~l~~~ 547 (856)
.+.+++..-++++++-.+++
T Consensus 467 ~~~fsw~~~a~~y~~lY~~~ 486 (489)
T PRK14098 467 ERDFSWKNSAEEYAQLYREL 486 (489)
T ss_pred cCCCChHHHHHHHHHHHHHH
Confidence 35688888888887655543
|
|
| >TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily | Back alignment and domain information |
|---|
Probab=99.90 E-value=8.7e-23 Score=213.84 Aligned_cols=211 Identities=21% Similarity=0.270 Sum_probs=142.3
Q ss_pred EEEecCCCCCCCCCCCCCCCHHHHHHHHHHHhhCCCeEEEecCCChhhHHHhhcCCC-CccEEeeCCEEEEeCCC--cce
Q 003025 594 ILFDYDGTVMPQTSINKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSPCK-KLGIAAEHGYFMRWSAD--EEW 670 (856)
Q Consensus 594 I~~DlDGTLl~~~~~~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~~~-~lgliaenG~~I~~~~~--~~w 670 (856)
|++|+||||++ +++.+++++.++|++| +++|+.|++||||++..+.+++..+. ..+++++||+.|...+. ..|
T Consensus 1 i~~DlDGTLl~---~~~~i~~~~~~al~~l-~~~Gi~~~~aTGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~~~~~~~~ 76 (225)
T TIGR01482 1 IASDIDGTLTD---PNRAINESALEAIRKA-ESVGIPVVLVTGNSVQFARALAKLIGTPDPVIAENGGEISYNEGMDDIF 76 (225)
T ss_pred CeEeccCccCC---CCcccCHHHHHHHHHH-HHCCCEEEEEcCCchHHHHHHHHHhCCCCeEEEecCcEEEeCCCCceEE
Confidence 68999999999 7788999999999997 88999999999999999988886665 45789999999987653 344
Q ss_pred EecCCCCcccHHHHHHHHHHHHhhcCCcceEEecccceEEeeecCCCCCCchhHHHHHHHHHHHhcCCCeEEEEcCeEEE
Q 003025 671 QNCGQSVDFGWIQIAEPVMKLYTESTDGSYIEIKESALVWHHRDADPGFGSSQAKELLDHLESVLANEPAAVKSGQFIVE 750 (856)
Q Consensus 671 ~~~~~~~~~~w~~~v~~i~~~~~~~~~Gs~ie~k~~~l~~~~~~~dp~~~~~~a~el~~~L~~~l~~~~~~v~~g~~~vE 750 (856)
.... ...|................-.+ .. ...........++ ..+.++.+. +.. ...+.++..++|
T Consensus 77 ~~~~---~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~----~~~~~~~~~----~~~-~~~~~~~~~~~e 142 (225)
T TIGR01482 77 LAYL---EEEWFLDIVIAKTFPFSRLKVQY-PR-RASLVKMRYGIDV----DTVREIIKE----LGL-NLVAVDSGFDIH 142 (225)
T ss_pred eccc---CHHHHHHHHHhcccchhhhcccc-cc-ccceEEEeecCCH----HHHHHHHHh----cCc-eEEEecCCcEEE
Confidence 4322 22232211110000000000000 00 0011111111111 112222222 221 123335667999
Q ss_pred EEeCCCCHHHHHHHHHHHhhhcCCCcceEEEEeCCchhHHHHHHccccccCCCCCCCccEEEEEeCCC----ccccceEc
Q 003025 751 VKPQGVSKGVVAEKIFTTMAESGRHADFVLCIGDDRSDEDMFEIIGNATSSGVLSSNASVFACTVGQK----PSKAKYYL 826 (856)
Q Consensus 751 I~p~gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~----~s~A~y~l 826 (856)
|.|+++|||.+++++++++ |++++++++|||+.||++||+.+|. +++|||+ +..|+|++
T Consensus 143 i~~~~~~K~~~i~~l~~~~---~i~~~~~i~~GD~~NDi~m~~~ag~--------------~vam~Na~~~~k~~A~~vt 205 (225)
T TIGR01482 143 ILPQGVNKGVAVKKLKEKL---GIKPGETLVCGDSENDIDLFEVPGF--------------GVAVANAQPELKEWADYVT 205 (225)
T ss_pred EeeCCCCHHHHHHHHHHHh---CCCHHHEEEECCCHhhHHHHHhcCc--------------eEEcCChhHHHHHhcCeec
Confidence 9999999999999999999 9999999999999999999999985 5777775 57899987
Q ss_pred C--ChhH----HHHHHHHH
Q 003025 827 D--DAAE----VVTMLEAL 839 (856)
Q Consensus 827 ~--~~~e----V~~~L~~L 839 (856)
. +.++ |.+.|+++
T Consensus 206 ~~~~~~G~~~~v~~~l~~~ 224 (225)
T TIGR01482 206 ESPYGEGGAEAIGEILQAI 224 (225)
T ss_pred CCCCCCcHHHHHHHHHHhh
Confidence 4 5677 88888765
|
catalyze the same reaction as SPP. |
| >TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.6e-22 Score=216.29 Aligned_cols=217 Identities=19% Similarity=0.313 Sum_probs=146.0
Q ss_pred EEEEecCCCCCCCCCCCCCCCHHHHHHHHHHHhhCCCeEEEecCCChhhHHHhhcCCC-CccEEeeCCEEEEeCCC-cce
Q 003025 593 AILFDYDGTVMPQTSINKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSPCK-KLGIAAEHGYFMRWSAD-EEW 670 (856)
Q Consensus 593 lI~~DlDGTLl~~~~~~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~~~-~lgliaenG~~I~~~~~-~~w 670 (856)
+|++|+||||++ .++.++++++++|++| ++.|+.|+|+|||+...+.+.+..+. ..++++.||+.|...++ ..+
T Consensus 1 li~~DlDGTLl~---~~~~i~~~~~~~i~~l-~~~G~~~~iaTGR~~~~~~~~~~~~~~~~~~I~~NGa~i~~~~~~~i~ 76 (256)
T TIGR00099 1 LIFIDLDGTLLN---DDHTISPSTKEALAKL-REKGIKVVLATGRPYKEVKNILKELGLDTPFITANGAAVIDDQGEILY 76 (256)
T ss_pred CEEEeCCCCCCC---CCCccCHHHHHHHHHH-HHCCCeEEEEeCCCHHHHHHHHHHcCCCCCEEEcCCcEEECCCCCEEe
Confidence 589999999999 7788999999999997 78899999999999999999887764 34789999999987643 333
Q ss_pred EecCCCCcccHHHHHHHHHHHHhhcC--------CcceEEecccc-eE----Eeeec----CC-----CC-CC-------
Q 003025 671 QNCGQSVDFGWIQIAEPVMKLYTEST--------DGSYIEIKESA-LV----WHHRD----AD-----PG-FG------- 720 (856)
Q Consensus 671 ~~~~~~~~~~w~~~v~~i~~~~~~~~--------~Gs~ie~k~~~-l~----~~~~~----~d-----p~-~~------- 720 (856)
...++ .+.+.++++.+.+.. .+.++...... +. ..+.. .+ .+ ..
T Consensus 77 ~~~i~------~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (256)
T TIGR00099 77 KKPLD------LDLVEEILNFLKKHGLDVILYGDDSIYASKNDPEYFTIFKKFLGEPKLEVVDIQYLPDDILKILLLFLD 150 (256)
T ss_pred ecCCC------HHHHHHHHHHHHHcCcEEEEEeCCeEEecCCCcchhHHHHHhccCCcceeccchhhhcccceEEEEECC
Confidence 33322 133334443332211 11221111000 00 00000 00 00 00
Q ss_pred chhHHHHHHHHHH-HhcCCCeEEEEcCeEEEEEeCCCCHHHHHHHHHHHhhhcCCCcceEEEEeCCchhHHHHHHccccc
Q 003025 721 SSQAKELLDHLES-VLANEPAAVKSGQFIVEVKPQGVSKGVVAEKIFTTMAESGRHADFVLCIGDDRSDEDMFEIIGNAT 799 (856)
Q Consensus 721 ~~~a~el~~~L~~-~l~~~~~~v~~g~~~vEI~p~gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~ 799 (856)
.....++.+.+.+ .+......+.++..++||.|+++|||.|++++++++ |++++++++|||+.||++||+.++.
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~leI~~~~~~K~~~i~~~~~~~---~~~~~~~~~~GD~~nD~~m~~~~~~-- 225 (256)
T TIGR00099 151 PEDLDLLIEALNKLELEENVSVVSSGPYSIEITAKGVSKGSALQSLAEAL---GISLEDVIAFGDGMNDIEMLEAAGY-- 225 (256)
T ss_pred HHHHHHHHHHhhhhhhcCCEEEEEecCceEEecCCCCChHHHHHHHHHHc---CCCHHHEEEeCCcHHhHHHHHhCCc--
Confidence 0112333344432 222223445678889999999999999999999999 9999999999999999999999985
Q ss_pred cCCCCCCCccEEEEEeCCC----ccccceEcC--ChhHHHHHH
Q 003025 800 SSGVLSSNASVFACTVGQK----PSKAKYYLD--DAAEVVTML 836 (856)
Q Consensus 800 ~~~~~~~~~~~~av~vG~~----~s~A~y~l~--~~~eV~~~L 836 (856)
+|+||++ +..|+|++. +.++|.++|
T Consensus 226 ------------~~a~~na~~~~k~~a~~~~~~n~~dGV~~~l 256 (256)
T TIGR00099 226 ------------GVAMGNADEELKALADYVTDSNNEDGVALAL 256 (256)
T ss_pred ------------eeEecCchHHHHHhCCEEecCCCCcchhhhC
Confidence 4677764 467888874 457777653
|
The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences. |
| >TIGR02095 glgA glycogen/starch synthases, ADP-glucose type | Back alignment and domain information |
|---|
Probab=99.89 E-value=7e-22 Score=230.09 Aligned_cols=309 Identities=16% Similarity=0.219 Sum_probs=204.0
Q ss_pred HHHHHHHHHHHHHHH-cCCCCCEEEEeCcccchHHHHHHhhcC--CCeEEEEEccCCCC----hHHHhcCCchH------
Q 003025 182 YVSANKIFSQRVIEV-INPEDDYVWIHDYHLMVLPTFLRRRFT--RLRMGFFLHSPFPS----SEIYRTLPVRE------ 248 (856)
Q Consensus 182 Y~~vN~~fa~~i~~~-~~~~~D~VwihDyhl~llp~~lr~~~~--~~~i~~flH~PfP~----~e~~~~lp~r~------ 248 (856)
+...++..++.+... .+| |+|++||+|-.++|.++++... ++|+.++.|...+. .+.+..+....
T Consensus 111 ~~~f~~a~~~~~~~~~~~~--DiiH~hdw~~~~~~~~l~~~~~~~~~~~v~TiH~~~~~g~~~~~~~~~~~~~~~~~~~~ 188 (473)
T TIGR02095 111 FAFFSRAAAELLSGLGWQP--DVVHAHDWHTALVPALLKAVYRPNPIKTVFTIHNLAYQGVFPADDFSELGLPPEYFHME 188 (473)
T ss_pred HHHHHHHHHHHHHhcCCCC--CEEEECCcHHHHHHHHHHhhccCCCCCEEEEcCCCccCCcCCHHHHHHcCCChHHcCch
Confidence 344444444443321 245 9999999999999999988765 38999999986431 22222221110
Q ss_pred --------H-HHHHhHhCCEEcccCHHHHHHHHHHHHhhhCceecccCceeeEE--ECCEEEEEEEeecccCchHHHHHh
Q 003025 249 --------E-ILKALLNADLIGFHTFDYARHFLSCCSRMLGLEYQSKRGYIGLE--YYGRTVGIKIMPVGIHMGQIESVL 317 (856)
Q Consensus 249 --------e-il~~ll~~dligf~t~~~~~~Fl~~~~r~lg~~~~~~~~~~~~~--~~gr~~~i~i~p~GId~~~~~~~~ 317 (856)
. +-.++..||.|-.-++.|++..... ..|. +++ +..+..++.++|+|||.+.|.+..
T Consensus 189 ~~~~~~~~~~~k~~~~~ad~v~tVS~~~~~ei~~~---~~~~---------~l~~~l~~~~~ki~~I~NGid~~~~~p~~ 256 (473)
T TIGR02095 189 GLEFYGRVNFLKGGIVYADRVTTVSPTYAREILTP---EFGY---------GLDGVLKARSGKLRGILNGIDTEVWNPAT 256 (473)
T ss_pred hhhcCCchHHHHHHHHhCCcCeecCHhHHHHhcCC---cCCc---------cchhHHHhcCCCeEEEeCCCCccccCCCC
Confidence 0 1224555666655555555443321 0000 010 011334678899999999886421
Q ss_pred cCc-----------hHHHHHHHHHHHcC-----CCeEEEeccCccccCCHHHHHHHHHHHHHhCCCCcCceEEEEEecCC
Q 003025 318 RLA-----------DKDWRVQELKQQFE-----GKTVLLGVDDMDIFKGVDLKLLAMEHLLKQHPKWQGRAVLVQIANPA 381 (856)
Q Consensus 318 ~~~-----------~~~~~~~~l~~~~~-----~k~iil~VdRld~~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~ 381 (856)
... ........+++++. ++++|++|||+.+.||+..+++|++++.++. +.|+.+|.+
T Consensus 257 ~~~~~~~~~~~~~~~k~~~k~~l~~~~gl~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~------~~lvi~G~g- 329 (473)
T TIGR02095 257 DPYLKANYSADDLAGKAENKEALQEELGLPVDDDVPLFGVISRLTQQKGVDLLLAALPELLELG------GQLVVLGTG- 329 (473)
T ss_pred CcccccCcCccchhhhhhhHHHHHHHcCCCccCCCCEEEEEecCccccChHHHHHHHHHHHHcC------cEEEEECCC-
Confidence 100 01122345666662 6789999999999999999999999997642 457777742
Q ss_pred CCCchhHHHHHHHHHHHHHHHhcccCCCCcccEEEEcCCCCHHHHHHHHHhcceeeeccccccCCCcccceeeeecCCCC
Q 003025 382 RGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDKPVTLSERAAYYTIAECVVVTAVRDGMNLTPYEYIVCRQGVSG 461 (856)
Q Consensus 382 r~~~~~~~~l~~~~~~lv~~IN~~~~~~~~~pvv~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~a~~~~~~~ 461 (856)
+ .++++++++++.+.+. .++++ ...+.+++..+|+.||++++||..||||++.+|||+|+
T Consensus 330 ----~--~~~~~~l~~~~~~~~~--------~v~~~-~~~~~~~~~~~~~~aDv~l~pS~~E~~gl~~lEAma~G----- 389 (473)
T TIGR02095 330 ----D--PELEEALRELAERYPG--------NVRVI-IGYDEALAHLIYAGADFILMPSRFEPCGLTQLYAMRYG----- 389 (473)
T ss_pred ----C--HHHHHHHHHHHHHCCC--------cEEEE-EcCCHHHHHHHHHhCCEEEeCCCcCCcHHHHHHHHHCC-----
Confidence 1 2355666666654221 13333 45678888999999999999999999999999999994
Q ss_pred CCCCCCCCCCCCceEEecCCcccccccC---------CceeeCCCCHHHHHHHHHHHHcC---CHHHHHHHHHHHhhhhh
Q 003025 462 SESSSESSAPKKSMLVVSEFIGCSPSLS---------GAIRVNPWNIEATAEAMHEAIQM---NEAEKQLRHEKHYRYVS 529 (856)
Q Consensus 462 ~~~~~~~~~~~~g~lV~Se~~G~~~~l~---------~al~VnP~d~~~~A~ai~~aL~m---~~~er~~r~~~~~~~v~ 529 (856)
.|+|+|..+|..+.+. .|++++|.|++++|++|.++|.+ .++.++...++.. .+
T Consensus 390 ------------~pvI~s~~gg~~e~v~~~~~~~~~~~G~l~~~~d~~~la~~i~~~l~~~~~~~~~~~~~~~~~~--~~ 455 (473)
T TIGR02095 390 ------------TVPIVRRTGGLADTVVDGDPEAESGTGFLFEEYDPGALLAALSRALRLYRQDPSLWEALQKNAM--SQ 455 (473)
T ss_pred ------------CCeEEccCCCccceEecCCCCCCCCceEEeCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHh--cc
Confidence 4999999999999882 37999999999999999999873 3333333333222 35
Q ss_pred cCCHHHHHHHHHHHHH
Q 003025 530 THDVAYWARSFFQDME 545 (856)
Q Consensus 530 ~~~~~~W~~~~l~~l~ 545 (856)
.+++...++++++-.+
T Consensus 456 ~fsw~~~a~~~~~~Y~ 471 (473)
T TIGR02095 456 DFSWDKSAKQYVELYR 471 (473)
T ss_pred CCCcHHHHHHHHHHHH
Confidence 6888888887766543
|
This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate. |
| >TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal | Back alignment and domain information |
|---|
Probab=99.89 E-value=2.5e-22 Score=209.16 Aligned_cols=208 Identities=21% Similarity=0.291 Sum_probs=141.1
Q ss_pred cEEEEEecCCCCCCCCCCCCCCCHHHHHHHHHHHhhCCCeEEEecCCChhhHHHhhcCCCC-ccEEeeCCEEEEeCCCcc
Q 003025 591 SRAILFDYDGTVMPQTSINKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSPCKK-LGIAAEHGYFMRWSADEE 669 (856)
Q Consensus 591 ~rlI~~DlDGTLl~~~~~~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~~~~-lgliaenG~~I~~~~~~~ 669 (856)
+|+|++|+||||++ .++.+++++.++|++| +++|+.|+++|||++..+.+++..++- .+++++||+.|+..+...
T Consensus 1 ik~v~~DlDGTLl~---~~~~i~~~~~~~i~~l-~~~g~~~~~~TGR~~~~~~~~~~~l~~~~~~i~~NGa~i~~~~~~~ 76 (215)
T TIGR01487 1 IKLVAIDIDGTLTE---PNRMISERAIEAIRKA-EKKGIPVSLVTGNTVPFARALAVLIGTSGPVVAENGGVIFYNKEDI 76 (215)
T ss_pred CcEEEEecCCCcCC---CCcccCHHHHHHHHHH-HHCCCEEEEEcCCcchhHHHHHHHhCCCCcEEEccCcEEEeCCCcE
Confidence 47999999999998 7888999999999997 889999999999999999998877653 368999999999865432
Q ss_pred eEecCCCCcccHHHHHHHHHHHHhhcCCcceEEecccceEEeeecCCCCCCchhHHHHHHHHHHHhcCCCeEEEEcCeEE
Q 003025 670 WQNCGQSVDFGWIQIAEPVMKLYTESTDGSYIEIKESALVWHHRDADPGFGSSQAKELLDHLESVLANEPAAVKSGQFIV 749 (856)
Q Consensus 670 w~~~~~~~~~~w~~~v~~i~~~~~~~~~Gs~ie~k~~~l~~~~~~~dp~~~~~~a~el~~~L~~~l~~~~~~v~~g~~~v 749 (856)
.. . .....|....... ..+....-.... ......+.. ..+ ..+.+.+.++ .....+..+..++
T Consensus 77 ~~--~-~~~~~~~~~~~~~-~~~~~~~~~~~~--~~~~~~~~~--~~~-----~~~~~~~~l~----~~~~~~~~~~~~~ 139 (215)
T TIGR01487 77 FL--A-NMEEEWFLDEEKK-KRFPRDRLSNEY--PRASLVIMR--EGK-----DVDEVREIIK----ERGLNLVDSGFAI 139 (215)
T ss_pred EE--e-cccchhhHHHhhh-hhhhhhhccccc--ceeEEEEec--CCc-----cHHHHHHHHH----hCCeEEEecCceE
Confidence 11 1 1111111100000 001000000000 000111111 001 1223333332 2334445556789
Q ss_pred EEEeCCCCHHHHHHHHHHHhhhcCCCcceEEEEeCCchhHHHHHHccccccCCCCCCCccEEEEEeCCC----ccccceE
Q 003025 750 EVKPQGVSKGVVAEKIFTTMAESGRHADFVLCIGDDRSDEDMFEIIGNATSSGVLSSNASVFACTVGQK----PSKAKYY 825 (856)
Q Consensus 750 EI~p~gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~----~s~A~y~ 825 (856)
||.|.+++||.+++++++++ |++++++++|||+.||++||+.++. +|+||+. +..|+|+
T Consensus 140 ei~~~~~~K~~~i~~l~~~~---~i~~~~~i~iGDs~ND~~ml~~ag~--------------~vam~na~~~~k~~A~~v 202 (215)
T TIGR01487 140 HIMKKGVDKGVGVEKLKELL---GIKPEEVAAIGDSENDIDLFRVVGF--------------KVAVANADDQLKEIADYV 202 (215)
T ss_pred EEecCCCChHHHHHHHHHHh---CCCHHHEEEECCCHHHHHHHHhCCC--------------eEEcCCccHHHHHhCCEE
Confidence 99999999999999999999 9999999999999999999999985 5777765 5789998
Q ss_pred cC--ChhHHHHHH
Q 003025 826 LD--DAAEVVTML 836 (856)
Q Consensus 826 l~--~~~eV~~~L 836 (856)
+. +.++|.++|
T Consensus 203 ~~~~~~~Gv~~~l 215 (215)
T TIGR01487 203 TSNPYGEGVVEVL 215 (215)
T ss_pred cCCCCCchhhhhC
Confidence 84 457777654
|
TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. |
| >cd03818 GT1_ExpC_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.89 E-value=1e-21 Score=223.46 Aligned_cols=305 Identities=14% Similarity=0.132 Sum_probs=202.4
Q ss_pred HHHHHHHHHHHHHHHHHHcCCCCCEEEEeCcccchHHHHHHhhcCCCeEEEEEccCCCC--hHH-Hh-cCCc--------
Q 003025 179 WEAYVSANKIFSQRVIEVINPEDDYVWIHDYHLMVLPTFLRRRFTRLRMGFFLHSPFPS--SEI-YR-TLPV-------- 246 (856)
Q Consensus 179 w~~Y~~vN~~fa~~i~~~~~~~~D~VwihDyhl~llp~~lr~~~~~~~i~~flH~PfP~--~e~-~~-~lp~-------- 246 (856)
+.....+-+.......+.++| |+|+.| +.+....++++.+|++++..++|..+=. .+. |. ..+.
T Consensus 68 ~~~~~~~~~~~~~~~~~~~~p--dvi~~h--~~~~~~~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 143 (396)
T cd03818 68 VLRGQAVARALLALRAKGFRP--DVIVAH--PGWGETLFLKDVWPDAPLIGYFEFYYRAEGADVGFDPEFPPSLDDALRL 143 (396)
T ss_pred HHHHHHHHHHHHHHHhcCCCC--CEEEEC--CccchhhhHHHhCCCCCEEEEEeeeecCCCCCCCCCCCCCCchhHHHHH
Confidence 333344443333333445566 899999 5666677899999999998877643311 110 10 1111
Q ss_pred hHH---HHHHhHhCCEEcccCHHHHHHHHHHHHhhhCceecccCceeeEEECCEEEEEEEeecccCchHHHHHhcCchHH
Q 003025 247 REE---ILKALLNADLIGFHTFDYARHFLSCCSRMLGLEYQSKRGYIGLEYYGRTVGIKIMPVGIHMGQIESVLRLADKD 323 (856)
Q Consensus 247 r~e---il~~ll~~dligf~t~~~~~~Fl~~~~r~lg~~~~~~~~~~~~~~~gr~~~i~i~p~GId~~~~~~~~~~~~~~ 323 (856)
+.. +...+-.+|.+-..+......|.+ ... .++.++|+|||.+.|.+.. ..
T Consensus 144 ~~~~~~~~~~~~~ad~vi~~s~~~~~~~~~--------------------~~~--~ki~vI~ngvd~~~f~~~~---~~- 197 (396)
T cd03818 144 RNRNALILLALAQADAGVSPTRWQRSTFPA--------------------ELR--SRISVIHDGIDTDRLRPDP---QA- 197 (396)
T ss_pred HHhhhHhHHHHHhCCEEECCCHHHHhhCcH--------------------hhc--cceEEeCCCccccccCCCc---hh-
Confidence 111 234566677777666533333221 011 3577899999998886321 11
Q ss_pred HHHHHHHHH---cCCCeEEEeccC-ccccCCHHHHHHHHHHHHHhCCCCcCceEEEEEecCCCCCchhHHHHHHHHHHHH
Q 003025 324 WRVQELKQQ---FEGKTVLLGVDD-MDIFKGVDLKLLAMEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATC 399 (856)
Q Consensus 324 ~~~~~l~~~---~~~k~iil~VdR-ld~~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~~~~lv 399 (856)
...++.. ..++++|++++| +.+.||+..+++|+.++.+++|+++ |+++|......+...+......+++.
T Consensus 198 --~~~~~~~~~~~~~~~~i~~vgR~l~~~Kg~~~ll~a~~~l~~~~~~~~----lvivG~~~~~~g~~~~~~~~~~~~~~ 271 (396)
T cd03818 198 --RLRLPNGRVLTPGDEVITFVARNLEPYRGFHVFMRALPRLLRARPDAR----VVIVGGDGVSYGAPPPDGESWKQHML 271 (396)
T ss_pred --hhcccccccCCCCCeEEEEECCCcccccCHHHHHHHHHHHHHHCCCcE----EEEEcCCCcccCCCCCCcccHHHHHH
Confidence 1111111 146789999998 9999999999999999999999766 88888532111110000001112223
Q ss_pred HHHhcccCCCCcccEEEEcCCCCHHHHHHHHHhcceeeeccccccCCCcccceeeeecCCCCCCCCCCCCCCCCceEEec
Q 003025 400 KRINETFGRPGYEPVVFIDKPVTLSERAAYYTIAECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVS 479 (856)
Q Consensus 400 ~~IN~~~~~~~~~pvv~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~g~lV~S 479 (856)
++++.+.+ .+.+.|.|.++.+++.++|+.||++++||..||+|++++|||||+. |+|+|
T Consensus 272 ~~~~~~~~----~~~V~f~G~v~~~~~~~~l~~adv~v~~s~~e~~~~~llEAmA~G~-----------------PVIas 330 (396)
T cd03818 272 DELGGRLD----LSRVHFLGRVPYDQYLALLQVSDVHVYLTYPFVLSWSLLEAMACGC-----------------LVVGS 330 (396)
T ss_pred HHhhcccC----cceEEEeCCCCHHHHHHHHHhCcEEEEcCcccccchHHHHHHHCCC-----------------CEEEc
Confidence 33332221 1345677899999999999999999999999999999999999955 99999
Q ss_pred CCcccccccC---CceeeCCCCHHHHHHHHHHHHcCCHHHHHHHHHHHhhhhhc-CCHHHHHHHHH
Q 003025 480 EFIGCSPSLS---GAIRVNPWNIEATAEAMHEAIQMNEAEKQLRHEKHYRYVST-HDVAYWARSFF 541 (856)
Q Consensus 480 e~~G~~~~l~---~al~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~-~~~~~W~~~~l 541 (856)
+.+|..+.+. .|++|+|.|++++|++|.++++.+ +++....++.++++.+ +++...+++++
T Consensus 331 ~~~g~~e~i~~~~~G~lv~~~d~~~la~~i~~ll~~~-~~~~~l~~~ar~~~~~~fs~~~~~~~~~ 395 (396)
T cd03818 331 DTAPVREVITDGENGLLVDFFDPDALAAAVIELLDDP-ARRARLRRAARRTALRYDLLSVCLPRQL 395 (396)
T ss_pred CCCCchhhcccCCceEEcCCCCHHHHHHHHHHHHhCH-HHHHHHHHHHHHHHHHhccHHHHHHHHh
Confidence 9999988883 489999999999999999999854 5566667777888876 77666666554
|
ExpC in Rhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucan (exopolysaccharide II). |
| >TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase | Back alignment and domain information |
|---|
Probab=99.89 E-value=3.5e-22 Score=212.80 Aligned_cols=221 Identities=15% Similarity=0.219 Sum_probs=148.6
Q ss_pred EEEEEecCCCCCCCCCCCCCCCHHHHHHHHHHHhhCCCeEEEecCCChhhHHHhhcCCC---CccEEeeCCEEEEeCCCc
Q 003025 592 RAILFDYDGTVMPQTSINKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSPCK---KLGIAAEHGYFMRWSADE 668 (856)
Q Consensus 592 rlI~~DlDGTLl~~~~~~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~~~---~lgliaenG~~I~~~~~~ 668 (856)
.+|++|+||||+++...+...++++.++++++ .++|+.|+++|||+..++..+...++ .-.++++||+.|+.++..
T Consensus 2 ~li~tDlDGTLl~~~~~~~~~~~~~~~~i~~~-~~~gi~fv~aTGR~~~~~~~~~~~~~~~~p~~~I~~NGa~I~~~~~~ 80 (249)
T TIGR01485 2 LLLVSDLDNTLVDHTDGDNQALLRLNALLEDH-RGEDSLLVYSTGRSPHSYKELQKQKPLLTPDIWVTSVGSEIYYGGAE 80 (249)
T ss_pred eEEEEcCCCcCcCCCCCChHHHHHHHHHHHHh-hccCceEEEEcCCCHHHHHHHHhcCCCCCCCEEEEcCCceEEeCCCC
Confidence 58999999999974334577889999999996 78899999999999999999865432 113788999999876521
Q ss_pred ----ceEecCCCCcccHH-HHHHHHHHHHhhcCCcceEEecccceEEeeecCCCCCCchhHHHHHHHHHHHhcCC---Ce
Q 003025 669 ----EWQNCGQSVDFGWI-QIAEPVMKLYTESTDGSYIEIKESALVWHHRDADPGFGSSQAKELLDHLESVLANE---PA 740 (856)
Q Consensus 669 ----~w~~~~~~~~~~w~-~~v~~i~~~~~~~~~Gs~ie~k~~~l~~~~~~~dp~~~~~~a~el~~~L~~~l~~~---~~ 740 (856)
.|... ....|. +.+..+...+....+......+..++.+.... + ...++.+.+.+.+... ..
T Consensus 81 ~~~~~~~~~---~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~k~~~~~~~---~----~~~~~~~~l~~~l~~~~~~~~ 150 (249)
T TIGR01485 81 VPDQHWAEY---LSEKWQRDIVVAITDKFEELKPQPDLEQRPHKVSFFLDP---E----AAPEVIKQLTEMLKETGLDVK 150 (249)
T ss_pred cCCHHHHHH---HhcccCHHHHHHHHhcCcccccCCccccCCeeEEEEech---h----hhhHHHHHHHHHHHhcCCCEE
Confidence 11111 111232 12222333333333333333344445544321 1 1223444444444332 24
Q ss_pred EEEEcCeEEEEEeCCCCHHHHHHHHHHHhhhcCCCcceEEEEeCCchhHHHHHHccccccCCCCCCCccEEEEEeCCCc-
Q 003025 741 AVKSGQFIVEVKPQGVSKGVVAEKIFTTMAESGRHADFVLCIGDDRSDEDMFEIIGNATSSGVLSSNASVFACTVGQKP- 819 (856)
Q Consensus 741 ~v~~g~~~vEI~p~gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~~- 819 (856)
.+.++..++||.|+++|||.|++++++++ |++++++++|||+.||++||+.++. .+|+|+|+.
T Consensus 151 ~~~~~~~~ldi~~~~~~K~~al~~l~~~~---~i~~~~~i~~GD~~ND~~ml~~~~~-------------~~va~~na~~ 214 (249)
T TIGR01485 151 LIYSSGKDLDILPQGSGKGQALQYLLQKL---AMEPSQTLVCGDSGNDIELFEIGSV-------------RGVIVSNAQE 214 (249)
T ss_pred EEEECCceEEEEeCCCChHHHHHHHHHHc---CCCccCEEEEECChhHHHHHHccCC-------------cEEEECCCHH
Confidence 45778899999999999999999999999 9999999999999999999998542 356777652
Q ss_pred ---cc-------cceEcC--ChhHHHHHHHHH
Q 003025 820 ---SK-------AKYYLD--DAAEVVTMLEAL 839 (856)
Q Consensus 820 ---s~-------A~y~l~--~~~eV~~~L~~L 839 (856)
.. ..|+.+ .++++++.|+++
T Consensus 215 ~~k~~~~~~~~~~~~~~~~~~~~Gi~e~l~~~ 246 (249)
T TIGR01485 215 ELLQWYDENAKDKIYHASERCAGGIIEAIAHF 246 (249)
T ss_pred HHHHHHHhcccCcEEEecCCCcHHHHHHHHHc
Confidence 11 125554 468899888875
|
Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain. |
| >PRK15427 colanic acid biosynthesis glycosyltransferase WcaL; Provisional | Back alignment and domain information |
|---|
Probab=99.89 E-value=2.4e-21 Score=220.91 Aligned_cols=274 Identities=15% Similarity=0.107 Sum_probs=198.1
Q ss_pred CEEEEeCcccchHHHHHHhh-cCCCeEEEEEccCCCC-hHHHhcCCchHHHHHHhHhCCEEcccCHHHHHHHHHHHHhhh
Q 003025 202 DYVWIHDYHLMVLPTFLRRR-FTRLRMGFFLHSPFPS-SEIYRTLPVREEILKALLNADLIGFHTFDYARHFLSCCSRML 279 (856)
Q Consensus 202 D~VwihDyhl~llp~~lr~~-~~~~~i~~flH~PfP~-~e~~~~lp~r~eil~~ll~~dligf~t~~~~~~Fl~~~~r~l 279 (856)
|+|+.|..+.-.+..++++. ....++.+++|-+-.. ..+.. ..+..+-+.+-.+|.|-..+....+.+.+ +
T Consensus 120 diihaH~~~~~~~~~~~~~~~~~~~~~~~t~Hg~d~~~~~~~~--~~~~~~~~~~~~ad~vv~~S~~~~~~l~~-----~ 192 (406)
T PRK15427 120 DVFIAHFGPAGVTAAKLRELGVLRGKIATIFHGIDISSREVLN--HYTPEYQQLFRRGDLMLPISDLWAGRLQK-----M 192 (406)
T ss_pred CEEEEcCChHHHHHHHHHHhCCCCCCeEEEEcccccccchhhh--hhhHHHHHHHHhCCEEEECCHHHHHHHHH-----c
Confidence 89999988776667777663 2345677888954211 11110 11112223344688877666543333321 1
Q ss_pred CceecccCceeeEEECCEEEEEEEeecccCchHHHHHhcCchHHHHHHHHHHHcCCCeEEEeccCccccCCHHHHHHHHH
Q 003025 280 GLEYQSKRGYIGLEYYGRTVGIKIMPVGIHMGQIESVLRLADKDWRVQELKQQFEGKTVLLGVDDMDIFKGVDLKLLAME 359 (856)
Q Consensus 280 g~~~~~~~~~~~~~~~gr~~~i~i~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~k~iil~VdRld~~KGi~~~l~A~~ 359 (856)
|. ...+|.++|+|||.+.|..... ....++..|++|||+.+.||+..+++|+.
T Consensus 193 g~---------------~~~ki~vi~nGvd~~~f~~~~~------------~~~~~~~~il~vGrl~~~Kg~~~ll~a~~ 245 (406)
T PRK15427 193 GC---------------PPEKIAVSRMGVDMTRFSPRPV------------KAPATPLEIISVARLTEKKGLHVAIEACR 245 (406)
T ss_pred CC---------------CHHHEEEcCCCCCHHHcCCCcc------------ccCCCCeEEEEEeCcchhcCHHHHHHHHH
Confidence 21 1235667899999988752110 01134567999999999999999999999
Q ss_pred HHHHhCCCCcCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCcccEEEEcCCCCHHHHHHHHHhcceeeec
Q 003025 360 HLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDKPVTLSERAAYYTIAECVVVT 439 (856)
Q Consensus 360 ~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~~~~lv~~IN~~~~~~~~~pvv~~~~~v~~~el~aly~~ADv~vvt 439 (856)
++.+++|+++ |+.+|. |+..++ +++++++. +..+.+.+.|.++++|+..+|+.||+||+|
T Consensus 246 ~l~~~~~~~~----l~ivG~-----G~~~~~----l~~~~~~~-------~l~~~V~~~G~~~~~el~~~l~~aDv~v~p 305 (406)
T PRK15427 246 QLKEQGVAFR----YRILGI-----GPWERR----LRTLIEQY-------QLEDVVEMPGFKPSHEVKAMLDDADVFLLP 305 (406)
T ss_pred HHHhhCCCEE----EEEEEC-----chhHHH----HHHHHHHc-------CCCCeEEEeCCCCHHHHHHHHHhCCEEEEC
Confidence 9988888654 777773 444334 44444442 345577888999999999999999999999
Q ss_pred ccc------ccCCCcccceeeeecCCCCCCCCCCCCCCCCceEEecCCcccccccC---CceeeCCCCHHHHHHHHHHHH
Q 003025 440 AVR------DGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIGCSPSLS---GAIRVNPWNIEATAEAMHEAI 510 (856)
Q Consensus 440 S~~------EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~al~VnP~d~~~~A~ai~~aL 510 (856)
|.. ||++++.+|||+|+. |+|+|..+|+.+.+. +|++|+|.|++++|++|.+++
T Consensus 306 S~~~~~g~~Eg~p~~llEAma~G~-----------------PVI~t~~~g~~E~v~~~~~G~lv~~~d~~~la~ai~~l~ 368 (406)
T PRK15427 306 SVTGADGDMEGIPVALMEAMAVGI-----------------PVVSTLHSGIPELVEADKSGWLVPENDAQALAQRLAAFS 368 (406)
T ss_pred CccCCCCCccCccHHHHHHHhCCC-----------------CEEEeCCCCchhhhcCCCceEEeCCCCHHHHHHHHHHHH
Confidence 984 999999999999955 999999999998883 489999999999999999999
Q ss_pred cCCHHHHHHHHHHHhhhhh-cCCHHHHHHHHHHHHHH
Q 003025 511 QMNEAEKQLRHEKHYRYVS-THDVAYWARSFFQDMER 546 (856)
Q Consensus 511 ~m~~~er~~r~~~~~~~v~-~~~~~~W~~~~l~~l~~ 546 (856)
++++++++...++.++++. .+++...++++.+-+++
T Consensus 369 ~~d~~~~~~~~~~ar~~v~~~f~~~~~~~~l~~~~~~ 405 (406)
T PRK15427 369 QLDTDELAPVVKRAREKVETDFNQQVINRELASLLQA 405 (406)
T ss_pred hCCHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhh
Confidence 9777777777888888774 58988888887766543
|
|
| >cd03796 GT1_PIG-A_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.89 E-value=2.3e-21 Score=220.84 Aligned_cols=282 Identities=13% Similarity=0.134 Sum_probs=196.9
Q ss_pred HHHcCCCCCEEEEeCcccchH-HHHHHhhcCCCeEEEEEccCCCChHHHhcCCchHHHHH-HhHhCCEEcccCHHHHHHH
Q 003025 194 IEVINPEDDYVWIHDYHLMVL-PTFLRRRFTRLRMGFFLHSPFPSSEIYRTLPVREEILK-ALLNADLIGFHTFDYARHF 271 (856)
Q Consensus 194 ~~~~~~~~D~VwihDyhl~ll-p~~lr~~~~~~~i~~flH~PfP~~e~~~~lp~r~eil~-~ll~~dligf~t~~~~~~F 271 (856)
++..+| |+|++|+++-... ...+-.+..++|+.+..|..|+..+.... +...+.+ .+-.+|.+.+.+....+.+
T Consensus 84 ~~~~~~--DiIh~~~~~~~~~~~~~~~~~~~~~~~v~t~h~~~~~~~~~~~--~~~~~~~~~~~~~d~ii~~s~~~~~~~ 159 (398)
T cd03796 84 LIRERI--TIVHGHQAFSALAHEALLHARTMGLKTVFTDHSLFGFADASSI--HTNKLLRFSLADVDHVICVSHTSKENT 159 (398)
T ss_pred HHhcCC--CEEEECCCCchHHHHHHHHhhhcCCcEEEEecccccccchhhH--HhhHHHHHhhccCCEEEEecHhHhhHH
Confidence 334466 9999999875433 34443445578999999987754332110 1111222 2345787777776555444
Q ss_pred HHHHHhhhCceecccCceeeEEECCEEEEEEEeecccCchHHHHHhcCchHHHHHHHHHHHcCCCeEEEeccCccccCCH
Q 003025 272 LSCCSRMLGLEYQSKRGYIGLEYYGRTVGIKIMPVGIHMGQIESVLRLADKDWRVQELKQQFEGKTVLLGVDDMDIFKGV 351 (856)
Q Consensus 272 l~~~~r~lg~~~~~~~~~~~~~~~gr~~~i~i~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~k~iil~VdRld~~KGi 351 (856)
.... + ....++.++|+|+|...|.+... . ..+++++|+++||+.+.||+
T Consensus 160 ~~~~----~---------------~~~~k~~vi~ngvd~~~f~~~~~-----~-------~~~~~~~i~~~grl~~~Kg~ 208 (398)
T cd03796 160 VLRA----S---------------LDPERVSVIPNAVDSSDFTPDPS-----K-------RDNDKITIVVISRLVYRKGI 208 (398)
T ss_pred HHHh----C---------------CChhhEEEEcCccCHHHcCCCcc-----c-------CCCCceEEEEEeccchhcCH
Confidence 3210 1 11235678899999988753211 0 12567899999999999999
Q ss_pred HHHHHHHHHHHHhCCCCcCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCcccEEEEcCCCCHHHHHHHHH
Q 003025 352 DLKLLAMEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDKPVTLSERAAYYT 431 (856)
Q Consensus 352 ~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~~~~lv~~IN~~~~~~~~~pvv~~~~~v~~~el~aly~ 431 (856)
..+++|+..+.+++|+++ |+.+|. ++..+++++ ++++. +..+.+.+.|.++.+++.++|+
T Consensus 209 ~~li~a~~~l~~~~~~~~----l~i~G~-----g~~~~~l~~----~~~~~-------~l~~~v~~~G~~~~~~~~~~l~ 268 (398)
T cd03796 209 DLLVGIIPEICKKHPNVR----FIIGGD-----GPKRILLEE----MREKY-------NLQDRVELLGAVPHERVRDVLV 268 (398)
T ss_pred HHHHHHHHHHHhhCCCEE----EEEEeC-----CchHHHHHH----HHHHh-------CCCCeEEEeCCCCHHHHHHHHH
Confidence 999999999988888765 777773 344344444 33332 3344556678899999999999
Q ss_pred hcceeeeccccccCCCcccceeeeecCCCCCCCCCCCCCCCCceEEecCCcccccccC-C-ceeeCCCCHHHHHHHHHHH
Q 003025 432 IAECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIGCSPSLS-G-AIRVNPWNIEATAEAMHEA 509 (856)
Q Consensus 432 ~ADv~vvtS~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~-~-al~VnP~d~~~~A~ai~~a 509 (856)
.||++++||..||||++.+|||+|+. |+|+|..+|..+.+. + ++.++| |.++++++|.++
T Consensus 269 ~ad~~v~pS~~E~~g~~~~EAma~G~-----------------PVI~s~~gg~~e~i~~~~~~~~~~-~~~~l~~~l~~~ 330 (398)
T cd03796 269 QGHIFLNTSLTEAFCIAIVEAASCGL-----------------LVVSTRVGGIPEVLPPDMILLAEP-DVESIVRKLEEA 330 (398)
T ss_pred hCCEEEeCChhhccCHHHHHHHHcCC-----------------CEEECCCCCchhheeCCceeecCC-CHHHHHHHHHHH
Confidence 99999999999999999999999955 999999999988883 3 444544 999999999999
Q ss_pred HcCCHHHHHHHHHHHhh-hhhcCCHHHHHHHHHHHHHHHHH
Q 003025 510 IQMNEAEKQLRHEKHYR-YVSTHDVAYWARSFFQDMERTCK 549 (856)
Q Consensus 510 L~m~~~er~~r~~~~~~-~v~~~~~~~W~~~~l~~l~~~~~ 549 (856)
+.++.+.+. ..++.++ ....+++..-++++++..+++..
T Consensus 331 l~~~~~~~~-~~~~~~~~~~~~fs~~~~~~~~~~~y~~l~~ 370 (398)
T cd03796 331 ISILRTGKH-DPWSFHNRVKKMYSWEDVAKRTEKVYDRILQ 370 (398)
T ss_pred HhChhhhhh-HHHHHHHHHHhhCCHHHHHHHHHHHHHHHhc
Confidence 986554433 3344444 44568999999998888777543
|
Phosphatidylinositol glycan-class A (PIG-A), an X-linked gene in humans, is necessary for the synthesis of N-acetylglucosaminyl-phosphatidylinositol, a very early intermediate in glycosyl phosphatidylinositol (GPI)-anchor biosynthesis. The GPI-anchor is an important cellular structure that facilitates the attachment of many proteins to cell surfaces. Somatic mutations in PIG-A have been associated with Paroxysmal Nocturnal Hemoglobinuria (PNH), an acquired hematological disorder. |
| >PRK14099 glycogen synthase; Provisional | Back alignment and domain information |
|---|
Probab=99.88 E-value=6.2e-21 Score=221.66 Aligned_cols=298 Identities=18% Similarity=0.187 Sum_probs=190.6
Q ss_pred cCCCCCEEEEeCcccchHHHHHHhh-cCCCeEEEEEccC-----CCChHHHhc--CCchH-------------HHHHHhH
Q 003025 197 INPEDDYVWIHDYHLMVLPTFLRRR-FTRLRMGFFLHSP-----FPSSEIYRT--LPVRE-------------EILKALL 255 (856)
Q Consensus 197 ~~~~~D~VwihDyhl~llp~~lr~~-~~~~~i~~flH~P-----fP~~e~~~~--lp~r~-------------eil~~ll 255 (856)
++| |+|++||+|-.++|.+++.+ ..++++.++.|.. ||. ..+.. +|... -+-.++.
T Consensus 132 ~~p--DIiH~Hdw~~~l~~~~l~~~~~~~~~~V~TiHn~~~qg~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~i~ 208 (485)
T PRK14099 132 FVP--DIVHAHDWQAGLAPAYLHYSGRPAPGTVFTIHNLAFQGQFPR-ELLGALGLPPSAFSLDGVEYYGGIGYLKAGLQ 208 (485)
T ss_pred CCC--CEEEECCcHHHHHHHHHHhCCCCCCCEEEeCCCCCCCCcCCH-HHHHHcCCChHHcCchhhhhCCCccHHHHHHH
Confidence 456 99999999999999999753 3467899999964 222 11111 11100 0222344
Q ss_pred hCCEEcccCHHHHHHHHHHHHhhhCceecccCceeeEEECCEEEEEEEeecccCchHHHHHhcCc-------h----HHH
Q 003025 256 NADLIGFHTFDYARHFLSCCSRMLGLEYQSKRGYIGLEYYGRTVGIKIMPVGIHMGQIESVLRLA-------D----KDW 324 (856)
Q Consensus 256 ~~dligf~t~~~~~~Fl~~~~r~lg~~~~~~~~~~~~~~~gr~~~i~i~p~GId~~~~~~~~~~~-------~----~~~ 324 (856)
.||.|---++.|++...+.- .-.|++. .+..+..++.++|+|||.+.|.+..... + ...
T Consensus 209 ~ad~vitVS~~~a~ei~~~~-~g~gl~~---------~l~~~~~ki~vI~NGID~~~f~p~~~~~~~~~~~~~~~~~k~~ 278 (485)
T PRK14099 209 LADRITTVSPTYALEIQGPE-AGMGLDG---------LLRQRADRLSGILNGIDTAVWNPATDELIAATYDVETLAARAA 278 (485)
T ss_pred hcCeeeecChhHHHHHhccc-CCcChHH---------HHHhhCCCeEEEecCCchhhccccccchhhhcCChhHHHhHHH
Confidence 45544444444443322100 0000000 0011345688899999999886532110 0 011
Q ss_pred HHHHHHHHcC-----CCeEEEeccCccccCCHHHHHHHHHHHHHhCCCCcCceEEEEEecCCCCCchhHHHHHHHHHHHH
Q 003025 325 RVQELKQQFE-----GKTVLLGVDDMDIFKGVDLKLLAMEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATC 399 (856)
Q Consensus 325 ~~~~l~~~~~-----~k~iil~VdRld~~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~~~~lv 399 (856)
....+++++. +.+++++|+|+++.||+..+++|+.+++++ + +.|+++|. |+ .++++++++++
T Consensus 279 ~k~~l~~~~gl~~~~~~~li~~VgRL~~~KG~d~Li~A~~~l~~~--~----~~lvivG~-----G~--~~~~~~l~~l~ 345 (485)
T PRK14099 279 NKAALQARFGLDPDPDALLLGVISRLSWQKGLDLLLEALPTLLGE--G----AQLALLGS-----GD--AELEARFRAAA 345 (485)
T ss_pred hHHHHHHHcCCCcccCCcEEEEEecCCccccHHHHHHHHHHHHhc--C----cEEEEEec-----CC--HHHHHHHHHHH
Confidence 1245566652 356888999999999999999999998753 2 44777774 22 23455666665
Q ss_pred HHHhcccCCCCcccEEEEcCCCCHHHHHHHH-HhcceeeeccccccCCCcccceeeeecCCCCCCCCCCCCCCCCceEEe
Q 003025 400 KRINETFGRPGYEPVVFIDKPVTLSERAAYY-TIAECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVV 478 (856)
Q Consensus 400 ~~IN~~~~~~~~~pvv~~~~~v~~~el~aly-~~ADv~vvtS~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~g~lV~ 478 (856)
.+.. ..++++.+. .+++..+| +.||+||+||.+||||++.+|||+|+ .|+|+
T Consensus 346 ~~~~--------~~v~~~~G~--~~~l~~~~~a~aDifv~PS~~E~fGl~~lEAma~G-----------------~ppVv 398 (485)
T PRK14099 346 QAYP--------GQIGVVIGY--DEALAHLIQAGADALLVPSRFEPCGLTQLCALRYG-----------------AVPVV 398 (485)
T ss_pred HHCC--------CCEEEEeCC--CHHHHHHHHhcCCEEEECCccCCCcHHHHHHHHCC-----------------CCcEE
Confidence 5421 124455565 57888877 56999999999999999999999994 37888
Q ss_pred cCCccccccc-C-----------CceeeCCCCHHHHHHHHHHHHc--CCHHHHHHHHHHHhhhhhcCCHHHHHHHHHHHH
Q 003025 479 SEFIGCSPSL-S-----------GAIRVNPWNIEATAEAMHEAIQ--MNEAEKQLRHEKHYRYVSTHDVAYWARSFFQDM 544 (856)
Q Consensus 479 Se~~G~~~~l-~-----------~al~VnP~d~~~~A~ai~~aL~--m~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~l 544 (856)
|..+|+.+.+ . .|++|+|.|++++|++|.+++. .+++.++...++.+ ...+++..-++++++-.
T Consensus 399 s~~GGl~d~V~~~~~~~~~~~~~~G~l~~~~d~~~La~ai~~a~~l~~d~~~~~~l~~~~~--~~~fSw~~~a~~y~~lY 476 (485)
T PRK14099 399 ARVGGLADTVVDANEMAIATGVATGVQFSPVTADALAAALRKTAALFADPVAWRRLQRNGM--TTDVSWRNPAQHYAALY 476 (485)
T ss_pred eCCCCccceeecccccccccCCCceEEeCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHhh--hhcCChHHHHHHHHHHH
Confidence 9999998877 2 4899999999999999998542 23333333333332 36788888888887766
Q ss_pred HHHHH
Q 003025 545 ERTCK 549 (856)
Q Consensus 545 ~~~~~ 549 (856)
+++..
T Consensus 477 ~~l~~ 481 (485)
T PRK14099 477 RSLVA 481 (485)
T ss_pred HHHHh
Confidence 66543
|
|
| >TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family | Back alignment and domain information |
|---|
Probab=99.88 E-value=1.2e-21 Score=209.74 Aligned_cols=219 Identities=15% Similarity=0.079 Sum_probs=144.3
Q ss_pred EEEEecCCCCCCCCCCCCCCCHHHHHHHHHHHhhCCCeEEEecCCChhhHHHhhcCCC-CccEEeeCCEEEEeCCCcc--
Q 003025 593 AILFDYDGTVMPQTSINKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSPCK-KLGIAAEHGYFMRWSADEE-- 669 (856)
Q Consensus 593 lI~~DlDGTLl~~~~~~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~~~-~lgliaenG~~I~~~~~~~-- 669 (856)
+|++|+||||++ .++.+.+.++++|++| ++.|+.|+++|||+...+.+++..+. ..++|++||++|...++..
T Consensus 1 li~~DlDGTll~---~~~~~~~~~~~~i~~l-~~~g~~~~~~TgR~~~~~~~~~~~~~~~~~~I~~NGa~i~~~~~~~~~ 76 (256)
T TIGR01486 1 WIFTDLDGTLLD---PHGYDWGPAKEVLERL-QELGIPVIPCTSKTAAEVEYLRKELGLEDPFIVENGGAIYGPRGWFTE 76 (256)
T ss_pred CEEEcCCCCCcC---CCCcCchHHHHHHHHH-HHCCCeEEEEcCCCHHHHHHHHHHcCCCCcEEEcCCeEEEeCCCcccC
Confidence 589999999998 5553445799999997 88899999999999999999987764 3579999999998765421
Q ss_pred ---eEecCCCCcccHHHHHHHHHHHHhhcCCcceEE-eccc--------c-------eEEeeecCCCCCCchhHHHHHHH
Q 003025 670 ---WQNCGQSVDFGWIQIAEPVMKLYTESTDGSYIE-IKES--------A-------LVWHHRDADPGFGSSQAKELLDH 730 (856)
Q Consensus 670 ---w~~~~~~~~~~w~~~v~~i~~~~~~~~~Gs~ie-~k~~--------~-------l~~~~~~~dp~~~~~~a~el~~~ 730 (856)
|.. ....++ +.+.++++.+.+..+..+.. .... . .... ... ...... ..+..+.
T Consensus 77 ~~~~~~---~~~i~~-~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~-~~~~~~~ 149 (256)
T TIGR01486 77 PEYPVI---ALGIPY-EKIRARLEELSEELGFKFRGLGDLTDAEIAELTGLSRELAALAQR-REY-SETILW-SEERRER 149 (256)
T ss_pred CCeEEE---EcCCCH-HHHHHHHHHHHHHhCCCccchhhCCHHHHHHHhCcCHHHHHHHhh-Ccc-CCceec-ChHHHHH
Confidence 211 111222 34445554333221111000 0000 0 0000 000 000000 1223333
Q ss_pred HHHHhcCCCeEEEEcCeEEEEEeCCCCHHHHHHHHHHHhhhcCCC--cceEEEEeCCchhHHHHHHccccccCCCCCCCc
Q 003025 731 LESVLANEPAAVKSGQFIVEVKPQGVSKGVVAEKIFTTMAESGRH--ADFVLCIGDDRSDEDMFEIIGNATSSGVLSSNA 808 (856)
Q Consensus 731 L~~~l~~~~~~v~~g~~~vEI~p~gvsKG~al~~Ll~~l~~~gi~--~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~ 808 (856)
+.+.+......+..+..++||.|.++|||.|++++++++ |++ .+++++|||+.||++||+.+|.
T Consensus 150 ~~~~~~~~~~~~~~s~~~~ei~~~~~~Kg~ai~~l~~~~---~i~~~~~~~~a~GD~~ND~~Ml~~ag~----------- 215 (256)
T TIGR01486 150 FTEALVELGLEVTHGNRFYHVLGAGSDKGKAANALKQFY---NQPGGAIKVVGLGDSPNDLPLLEVVDL----------- 215 (256)
T ss_pred HHHHHHHcCCEEEeCCceEEEecCCCCHHHHHHHHHHHH---hhcCCCceEEEEcCCHhhHHHHHHCCE-----------
Confidence 444443334455556679999999999999999999999 999 9999999999999999999995
Q ss_pred cEEEEEeCCCc-------cc--cc-eEc--CChhHHHHHHHHH
Q 003025 809 SVFACTVGQKP-------SK--AK-YYL--DDAAEVVTMLEAL 839 (856)
Q Consensus 809 ~~~av~vG~~~-------s~--A~-y~l--~~~~eV~~~L~~L 839 (856)
+|+|||+. .. |. |++ ++.++|++.|+++
T Consensus 216 ---~vam~Na~~~~~~lk~~~~a~~~vt~~~~~dGva~~l~~~ 255 (256)
T TIGR01486 216 ---AVVVPGPNGPNVSLKPGDPGSFLLTPAPGPEGWREALEHL 255 (256)
T ss_pred ---EEEeCCCCCCccccCccCCCcEEEcCCCCcHHHHHHHHHh
Confidence 56666652 22 34 766 4679999999876
|
This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta |
| >PLN02871 UDP-sulfoquinovose:DAG sulfoquinovosyltransferase | Back alignment and domain information |
|---|
Probab=99.88 E-value=4.8e-21 Score=222.56 Aligned_cols=284 Identities=14% Similarity=0.175 Sum_probs=198.0
Q ss_pred HHHHcCCCCCEEEEeCcccchHHHHHHhhcCCCeEEEEEccCCCChHHHhcCCch-H---HHHHH-hHhCCEEcccCHHH
Q 003025 193 VIEVINPEDDYVWIHDYHLMVLPTFLRRRFTRLRMGFFLHSPFPSSEIYRTLPVR-E---EILKA-LLNADLIGFHTFDY 267 (856)
Q Consensus 193 i~~~~~~~~D~VwihDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~~~~lp~r-~---eil~~-ll~~dligf~t~~~ 267 (856)
+++..+| |+|++|+...+.++.++-.+..++|+.+.+|.-+|........++. + .+.+- .-.+|.|...+...
T Consensus 139 ~i~~~kp--DiIh~~~~~~~~~~~~~~ak~~~ip~V~~~h~~~~~~~~~~~~~~~~~~~~~~~r~~~~~ad~ii~~S~~~ 216 (465)
T PLN02871 139 EVARFKP--DLIHASSPGIMVFGALFYAKLLCVPLVMSYHTHVPVYIPRYTFSWLVKPMWDIIRFLHRAADLTLVTSPAL 216 (465)
T ss_pred HHHhCCC--CEEEECCCchhHHHHHHHHHHhCCCEEEEEecCchhhhhcccchhhHHHHHHHHHHHHhhCCEEEECCHHH
Confidence 3444566 9999998776666665544455788999898765542110011110 0 11121 22477777777655
Q ss_pred HHHHHHHHHhhhCceecccCceeeEEECCEEEEEEEeecccCchHHHHHhcCchHHHHHHHHHHHc----CCCeEEEecc
Q 003025 268 ARHFLSCCSRMLGLEYQSKRGYIGLEYYGRTVGIKIMPVGIHMGQIESVLRLADKDWRVQELKQQF----EGKTVLLGVD 343 (856)
Q Consensus 268 ~~~Fl~~~~r~lg~~~~~~~~~~~~~~~gr~~~i~i~p~GId~~~~~~~~~~~~~~~~~~~l~~~~----~~k~iil~Vd 343 (856)
.+.+.. .+. ....++.++|+|||.+.|.+.... ..++.++ +++++|+++|
T Consensus 217 ~~~l~~-----~~~--------------~~~~kv~vi~nGvd~~~f~p~~~~-------~~~~~~~~~~~~~~~~i~~vG 270 (465)
T PLN02871 217 GKELEA-----AGV--------------TAANRIRVWNKGVDSESFHPRFRS-------EEMRARLSGGEPEKPLIVYVG 270 (465)
T ss_pred HHHHHH-----cCC--------------CCcCeEEEeCCccCccccCCcccc-------HHHHHHhcCCCCCCeEEEEeC
Confidence 555443 010 012356789999999888532211 1223332 3678999999
Q ss_pred CccccCCHHHHHHHHHHHHHhCCCCcCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCcccEEEEcCCCCH
Q 003025 344 DMDIFKGVDLKLLAMEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDKPVTL 423 (856)
Q Consensus 344 Rld~~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~~~~lv~~IN~~~~~~~~~pvv~~~~~v~~ 423 (856)
|+.+.||+..+++|++++ |++ .|+++| +|+..+ +++++++.. +| .|.|.++.
T Consensus 271 rl~~~K~~~~li~a~~~~----~~~----~l~ivG-----~G~~~~----~l~~~~~~~----------~V-~f~G~v~~ 322 (465)
T PLN02871 271 RLGAEKNLDFLKRVMERL----PGA----RLAFVG-----DGPYRE----ELEKMFAGT----------PT-VFTGMLQG 322 (465)
T ss_pred CCchhhhHHHHHHHHHhC----CCc----EEEEEe-----CChHHH----HHHHHhccC----------Ce-EEeccCCH
Confidence 999999999999988654 554 488777 344433 344443321 23 46789999
Q ss_pred HHHHHHHHhcceeeeccccccCCCcccceeeeecCCCCCCCCCCCCCCCCceEEecCCcccccccC------CceeeCCC
Q 003025 424 SERAAYYTIAECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIGCSPSLS------GAIRVNPW 497 (856)
Q Consensus 424 ~el~aly~~ADv~vvtS~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~------~al~VnP~ 497 (856)
+|+..+|+.||+||+||..||||++++|||||+. |+|+|..+|+.+.+. +|++|+|.
T Consensus 323 ~ev~~~~~~aDv~V~pS~~E~~g~~vlEAmA~G~-----------------PVI~s~~gg~~eiv~~~~~~~~G~lv~~~ 385 (465)
T PLN02871 323 DELSQAYASGDVFVMPSESETLGFVVLEAMASGV-----------------PVVAARAGGIPDIIPPDQEGKTGFLYTPG 385 (465)
T ss_pred HHHHHHHHHCCEEEECCcccccCcHHHHHHHcCC-----------------CEEEcCCCCcHhhhhcCCCCCceEEeCCC
Confidence 9999999999999999999999999999999955 999999999988773 28999999
Q ss_pred CHHHHHHHHHHHHcCCHHHHHHHHHHHhhhhhcCCHHHHHHHHHHH-HHHHHHh
Q 003025 498 NIEATAEAMHEAIQMNEAEKQLRHEKHYRYVSTHDVAYWARSFFQD-MERTCKD 550 (856)
Q Consensus 498 d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~-l~~~~~~ 550 (856)
|++++|++|.++++ +++.++...++.++++..+++...++++++. -.++...
T Consensus 386 d~~~la~~i~~ll~-~~~~~~~~~~~a~~~~~~fsw~~~a~~l~~~~Y~~~~~~ 438 (465)
T PLN02871 386 DVDDCVEKLETLLA-DPELRERMGAAAREEVEKWDWRAATRKLRNEQYSAAIWF 438 (465)
T ss_pred CHHHHHHHHHHHHh-CHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHH
Confidence 99999999999997 4566666777788888999999999999874 4444443
|
|
| >PTZ00174 phosphomannomutase; Provisional | Back alignment and domain information |
|---|
Probab=99.88 E-value=3e-21 Score=205.28 Aligned_cols=198 Identities=14% Similarity=0.155 Sum_probs=128.1
Q ss_pred CCcEEEEEecCCCCCCCCCCCCCCCHHHHHHHHHHHhhCCCeEEEecCCChhhHHHhhcCC--CC-ccEEeeCCEEEEeC
Q 003025 589 SKSRAILFDYDGTVMPQTSINKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSPC--KK-LGIAAEHGYFMRWS 665 (856)
Q Consensus 589 s~~rlI~~DlDGTLl~~~~~~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~~--~~-lgliaenG~~I~~~ 665 (856)
.++|+|++|+||||++ ++++++++++++|+++ +++|++|+|||||+...+.+.++.. .. ..+++.||+.|+..
T Consensus 3 ~~~klia~DlDGTLL~---~~~~is~~~~~ai~~l-~~~Gi~~viaTGR~~~~i~~~l~~~~~~~~~~~I~~NGa~I~~~ 78 (247)
T PTZ00174 3 MKKTILLFDVDGTLTK---PRNPITQEMKDTLAKL-KSKGFKIGVVGGSDYPKIKEQLGEDVLEDFDYVFSENGLVAYKD 78 (247)
T ss_pred CCCeEEEEECcCCCcC---CCCCCCHHHHHHHHHH-HHCCCEEEEEcCCCHHHHHHHHhhhhhcccCeEEeCCceEEEEC
Confidence 4589999999999999 8899999999999996 8899999999999999998888532 12 25789999999875
Q ss_pred CCcceEecCCC-CcccHHHHHHHHHHHH-----hhcCCcceEEecccceEEeeecCCC------C---CC--chhHHHHH
Q 003025 666 ADEEWQNCGQS-VDFGWIQIAEPVMKLY-----TESTDGSYIEIKESALVWHHRDADP------G---FG--SSQAKELL 728 (856)
Q Consensus 666 ~~~~w~~~~~~-~~~~w~~~v~~i~~~~-----~~~~~Gs~ie~k~~~l~~~~~~~dp------~---~~--~~~a~el~ 728 (856)
+...+...... .+.++...+....+.+ .....+.+.+.........+..... + +. .....++.
T Consensus 79 ~~~i~~~~i~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (247)
T PTZ00174 79 GELFHSQSILKFLGEEKLKKFINFCLRYIADLDIPVKRGTFIEYRNGMINISPIGRNCSQEERDEFEKYDKEHHIREKFI 158 (247)
T ss_pred CeEEEEEcchhcCCHHHHHHHHHHHHHHHHhcCCccceeeeEEcCCceEEeccccccCCHHHHHHHHhcCCcchHHHHHH
Confidence 54334332211 2222222222222111 1112233333221111111100000 0 00 01224555
Q ss_pred HHHHHHhcCCCeEEEE-cCeEEEEEeCCCCHHHHHHHHHHHhhhcCCCcceEEEEeC----CchhHHHHHHccc
Q 003025 729 DHLESVLANEPAAVKS-GQFIVEVKPQGVSKGVVAEKIFTTMAESGRHADFVLCIGD----DRSDEDMFEIIGN 797 (856)
Q Consensus 729 ~~L~~~l~~~~~~v~~-g~~~vEI~p~gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD----~~ND~~Mf~~ag~ 797 (856)
+.+.+.+.+..+.... +..++||.|+|+|||.|+++|+++ +++|+|||| +.||++||+.++.
T Consensus 159 ~~l~~~~~~~~~~~s~~~~~~leI~~~gvsKg~al~~L~~~-------~~eviafGD~~~~~~NDieMl~~~~~ 225 (247)
T PTZ00174 159 QDLKKEFSDLGLKFSIGGQISFDVFPKGWDKTYCLRHLEND-------FKEIHFFGDKTFEGGNDYEIYNDPRT 225 (247)
T ss_pred HHHHHhcCCCCeEEEecCceEEEeeeCCCcHHHHHHHHHhh-------hhhEEEEcccCCCCCCcHhhhhcCCC
Confidence 6665555443333333 457999999999999999999996 489999999 8999999998765
|
|
| >TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial | Back alignment and domain information |
|---|
Probab=99.87 E-value=2.6e-21 Score=204.49 Aligned_cols=214 Identities=14% Similarity=0.176 Sum_probs=147.4
Q ss_pred EEEEecCCCCCCCCCCCCCCCHHHHHHHHHHHhhCCCeEEEecCCChhhHHHhhcCCC-C--ccEEeeCCEEEEeCCCcc
Q 003025 593 AILFDYDGTVMPQTSINKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSPCK-K--LGIAAEHGYFMRWSADEE 669 (856)
Q Consensus 593 lI~~DlDGTLl~~~~~~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~~~-~--lgliaenG~~I~~~~~~~ 669 (856)
+|++|+||||++ .++.+++.+ ++++ + +++|+.++++|||+...+.+.+..+. . ..++++||+.|......
T Consensus 1 li~~DlDgTLl~---~~~~~~~~~-~~~~-~-~~~gi~~viaTGR~~~~v~~~~~~l~l~~~~~~I~~nGa~i~~~~~~- 73 (236)
T TIGR02471 1 LIITDLDNTLLG---DDEGLASFV-ELLR-G-SGDAVGFGIATGRSVESAKSRYAKLNLPSPDVLIARVGTEIYYGPEL- 73 (236)
T ss_pred CeEEeccccccC---CHHHHHHHH-HHHH-h-cCCCceEEEEeCCCHHHHHHHHHhCCCCCCCEEEECCCceEEeCCCC-
Confidence 589999999999 667777766 7776 4 78899999999999999999997653 1 23899999998764321
Q ss_pred eEecCCCCcccHHHHH-----HHHHHHHhhcCCcceEEeccc--ceEEeeecCCCCCCchhHHHHHHHHHHHhcCCCeEE
Q 003025 670 WQNCGQSVDFGWIQIA-----EPVMKLYTESTDGSYIEIKES--ALVWHHRDADPGFGSSQAKELLDHLESVLANEPAAV 742 (856)
Q Consensus 670 w~~~~~~~~~~w~~~v-----~~i~~~~~~~~~Gs~ie~k~~--~l~~~~~~~dp~~~~~~a~el~~~L~~~l~~~~~~v 742 (856)
..+..|.... ...+..+....+|..++.+.. ...+++... ++.. ....++.+.+.... .....+
T Consensus 74 ------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~-~~~~-~~~~~~~~~l~~~~-~~~~~~ 144 (236)
T TIGR02471 74 ------QPDRFWQKHIDHDWRRQAVVEALADIPGLTLQDDQEQGPFKISYLLD-PEGE-PILPQIRQRLRQQS-QAAKVI 144 (236)
T ss_pred ------CCChhHHHHHhcCCCHHHHHHHHhcCCCcEeCChhcCCCeeEEEEEC-cccc-hHHHHHHHHHHhcc-CCEEEE
Confidence 0111121111 011233334456665555432 344555432 2211 12334444444321 112345
Q ss_pred EEcCeEEEEEeCCCCHHHHHHHHHHHhhhcCCCcceEEEEeCCchhHHHHHHccccccCCCCCCCccEEEEEeCCC----
Q 003025 743 KSGQFIVEVKPQGVSKGVVAEKIFTTMAESGRHADFVLCIGDDRSDEDMFEIIGNATSSGVLSSNASVFACTVGQK---- 818 (856)
Q Consensus 743 ~~g~~~vEI~p~gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~---- 818 (856)
.++..++|+.|+++|||.|++++++++ |++++++++|||+.||++||+.++. +++||++
T Consensus 145 ~~~~~~~ei~~~~~~K~~al~~l~~~~---g~~~~~~i~~GD~~nD~~ml~~~~~--------------~iav~na~~~~ 207 (236)
T TIGR02471 145 LSCGWFLDVLPLRASKGLALRYLSYRW---GLPLEQILVAGDSGNDEEMLRGLTL--------------GVVVGNHDPEL 207 (236)
T ss_pred EECCceEEEeeCCCChHHHHHHHHHHh---CCCHHHEEEEcCCccHHHHHcCCCc--------------EEEEcCCcHHH
Confidence 677789999999999999999999999 9999999999999999999999875 5677775
Q ss_pred ccccc----eEcC--ChhHHHHHHHHH
Q 003025 819 PSKAK----YYLD--DAAEVVTMLEAL 839 (856)
Q Consensus 819 ~s~A~----y~l~--~~~eV~~~L~~L 839 (856)
+..|+ |+++ +.++|.+.|+.+
T Consensus 208 k~~a~~~~~~v~~~~~~~Gv~~~i~~~ 234 (236)
T TIGR02471 208 EGLRHQQRIYFANNPHAFGILEGINHY 234 (236)
T ss_pred HHhhcCCcEEEcCCCChhHHHHHHHhh
Confidence 46677 6664 468899999864
|
Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472. |
| >PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=99.87 E-value=6.5e-21 Score=205.89 Aligned_cols=226 Identities=13% Similarity=0.100 Sum_probs=147.7
Q ss_pred CCcEEEEEecCCCCCCCCCCCCCCCHHHHHHHHHHHhhCCCeEEEecCCChhhHHHhhcCCC-CccEEeeCCEEEEeCCC
Q 003025 589 SKSRAILFDYDGTVMPQTSINKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSPCK-KLGIAAEHGYFMRWSAD 667 (856)
Q Consensus 589 s~~rlI~~DlDGTLl~~~~~~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~~~-~lgliaenG~~I~~~~~ 667 (856)
.++|+|++|+||||++ .++.+++++.++|++| ++.|+.|+|||||+...+...+..+. ..++++.||++|+.+++
T Consensus 2 ~~~kli~~DlDGTLl~---~~~~~~~~~~~ai~~l-~~~Gi~~~iaTgR~~~~~~~~~~~l~l~~~~i~~nGa~i~~~~~ 77 (273)
T PRK00192 2 MMKLLVFTDLDGTLLD---HHTYSYEPAKPALKAL-KEKGIPVIPCTSKTAAEVEVLRKELGLEDPFIVENGAAIYIPKN 77 (273)
T ss_pred CcceEEEEcCcccCcC---CCCcCcHHHHHHHHHH-HHCCCEEEEEcCCCHHHHHHHHHHcCCCCCEEEEcCcEEEeccc
Confidence 3689999999999998 6778889999999997 88899999999999999999887654 33689999999987543
Q ss_pred c-------------ceEecCCCCcccHHHHHHHHHHHHhhcCCcce-EEec----c----cceEE---e-eecCCC--CC
Q 003025 668 E-------------EWQNCGQSVDFGWIQIAEPVMKLYTESTDGSY-IEIK----E----SALVW---H-HRDADP--GF 719 (856)
Q Consensus 668 ~-------------~w~~~~~~~~~~w~~~v~~i~~~~~~~~~Gs~-ie~k----~----~~l~~---~-~~~~dp--~~ 719 (856)
. .|... ...+ .+.+.++++.+.......+ .... . ..+.. . ...... .+
T Consensus 78 ~~~~~~~~~~~~~~~~~~~---~~~~-~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (273)
T PRK00192 78 YFPFQPDGERLKGDYWVIE---LGPP-YEELREILDEISDELGYPLKGFGDLSAEEVAELTGLSGESARLAKDREFSEPF 153 (273)
T ss_pred ccccCCccccccCCceEEE---cCCC-HHHHHHHHHHHHHHhCCCeeehhhCCHHHHHHHhCcCHHHHHHHHhcccCCce
Confidence 1 12111 1111 1333333332222111000 0000 0 00000 0 000000 00
Q ss_pred CchhHHHHHHHHHHHhcCCCeEEEEcCeEEEEEeCCCCHHHHHHHHHHHhhhcCCCc-ceEEEEeCCchhHHHHHHcccc
Q 003025 720 GSSQAKELLDHLESVLANEPAAVKSGQFIVEVKPQGVSKGVVAEKIFTTMAESGRHA-DFVLCIGDDRSDEDMFEIIGNA 798 (856)
Q Consensus 720 ~~~~a~el~~~L~~~l~~~~~~v~~g~~~vEI~p~gvsKG~al~~Ll~~l~~~gi~~-d~vlaiGD~~ND~~Mf~~ag~~ 798 (856)
......+..+.+...+......+..++.++||.|.+ +||.+++++++++ |+++ +++++|||+.||++||+.+|.
T Consensus 154 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ei~~~~-~Kg~al~~l~~~~---~i~~~~~v~~~GDs~NDi~m~~~ag~- 228 (273)
T PRK00192 154 LWNGSEAAKERFEEALKRLGLKVTRGGRFLHLLGGG-DKGKAVRWLKELY---RRQDGVETIALGDSPNDLPMLEAADI- 228 (273)
T ss_pred eecCchHHHHHHHHHHHHcCCEEEECCeEEEEeCCC-CHHHHHHHHHHHH---hccCCceEEEEcCChhhHHHHHhCCe-
Confidence 000012333444444443445555677899999999 9999999999999 9999 999999999999999999995
Q ss_pred ccCCCCCCCccEEEEEeCCCc--------ccc-ceEc----CChhHHHHHHHHHH
Q 003025 799 TSSGVLSSNASVFACTVGQKP--------SKA-KYYL----DDAAEVVTMLEALA 840 (856)
Q Consensus 799 ~~~~~~~~~~~~~av~vG~~~--------s~A-~y~l----~~~~eV~~~L~~L~ 840 (856)
+|+|||++ ..| +++. ++.++|++.|+++.
T Consensus 229 -------------~vam~NA~~~~k~~~~~~a~~~v~~~~~~~~~Gv~~~l~~~~ 270 (273)
T PRK00192 229 -------------AVVVPGPDGPNPPLLPGIADGEFILASAPGPEGWAEAINKLL 270 (273)
T ss_pred -------------eEEeCCCCCCCcccCccccCCceEEecCCCcHHHHHHHHHHH
Confidence 56677642 333 3554 34789999999875
|
|
| >cd03791 GT1_Glycogen_synthase_DULL1_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.86 E-value=2e-20 Score=217.99 Aligned_cols=309 Identities=17% Similarity=0.204 Sum_probs=203.4
Q ss_pred HHHHHHHHHHHHHHHHH-cCCCCCEEEEeCcccchHHHHHHhhc-----CCCeEEEEEccCCCCh----HHHhc--CCc-
Q 003025 180 EAYVSANKIFSQRVIEV-INPEDDYVWIHDYHLMVLPTFLRRRF-----TRLRMGFFLHSPFPSS----EIYRT--LPV- 246 (856)
Q Consensus 180 ~~Y~~vN~~fa~~i~~~-~~~~~D~VwihDyhl~llp~~lr~~~-----~~~~i~~flH~PfP~~----e~~~~--lp~- 246 (856)
..|...++...+.+.+. .+| |+|++||+|-.++|.++++.+ .++|+.|..|.+.+.. ..+.. +++
T Consensus 110 ~~~~~f~~~~~~~l~~~~~~p--DviH~hd~~t~~~~~~l~~~~~~~~~~~~~~v~tiH~~~~~g~~~~~~~~~~~~~~~ 187 (476)
T cd03791 110 ERFALFSRAALELLRRLGWKP--DIIHCHDWHTGLVPALLKEKYADPFFKNIKTVFTIHNLAYQGVFPLEALEDLGLPWE 187 (476)
T ss_pred HHHHHHHHHHHHHHHhcCCCC--cEEEECchHHHHHHHHHHHhhccccCCCCCEEEEeCCCCCCCCCCHHHHHHcCCCcc
Confidence 34444555555544432 345 999999999999999998874 5899999999875421 11111 111
Q ss_pred -------------hHHHHHHhHhCCEEcccCHHHHHHHHHHHHhhhCceecccCceeeEE--ECCEEEEEEEeecccCch
Q 003025 247 -------------REEILKALLNADLIGFHTFDYARHFLSCCSRMLGLEYQSKRGYIGLE--YYGRTVGIKIMPVGIHMG 311 (856)
Q Consensus 247 -------------r~eil~~ll~~dligf~t~~~~~~Fl~~~~r~lg~~~~~~~~~~~~~--~~gr~~~i~i~p~GId~~ 311 (856)
..-+..++..||.|-.-+..|++..++.- .| .+++ ...+..++.++|+|||.+
T Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~ad~v~~vS~~~~~~i~~~~-----------~~-~gl~~~~~~~~~ki~~I~NGid~~ 255 (476)
T cd03791 188 ELFHIDGLEFYGQVNFLKAGIVYADAVTTVSPTYAREILTPE-----------FG-EGLDGLLRARAGKLSGILNGIDYD 255 (476)
T ss_pred chhhhcccccCCcccHHHHHHHhcCcCeecCHhHHHHhCCCC-----------CC-cchHHHHHhccCCeEEEeCCCcCc
Confidence 01122345556666555555555443200 00 0000 112335778899999998
Q ss_pred HHHHHhcCc-----------hHHHHHHHHHHHc-----CCCeEEEeccCccccCCHHHHHHHHHHHHHhCCCCcCceEEE
Q 003025 312 QIESVLRLA-----------DKDWRVQELKQQF-----EGKTVLLGVDDMDIFKGVDLKLLAMEHLLKQHPKWQGRAVLV 375 (856)
Q Consensus 312 ~~~~~~~~~-----------~~~~~~~~l~~~~-----~~k~iil~VdRld~~KGi~~~l~A~~~ll~~~p~~~~~vvLv 375 (856)
.|.+..... ........+++++ +++++|+++||+.+.||+..+++|++++.+++ +.|+
T Consensus 256 ~~~p~~~~~~~~~~~~~~~~~~~~~k~~l~~~~g~~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~------~~lv 329 (476)
T cd03791 256 VWNPATDPHLPANYSADDLEGKAENKAALQEELGLPVDPDAPLFGFVGRLTEQKGIDLLLEALPELLELG------GQLV 329 (476)
T ss_pred ccCccccchhhhcCCccccccHHHHHHHHHHHcCCCcCCCCCEEEEEeeccccccHHHHHHHHHHHHHcC------cEEE
Confidence 886432110 0112234456655 46789999999999999999999999987653 4577
Q ss_pred EEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCcccEEEEcCCCCHHHHHHHHHhcceeeeccccccCCCcccceeee
Q 003025 376 QIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDKPVTLSERAAYYTIAECVVVTAVRDGMNLTPYEYIVC 455 (856)
Q Consensus 376 qi~~p~r~~~~~~~~l~~~~~~lv~~IN~~~~~~~~~pvv~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~a~ 455 (856)
.+|.. + .++++++++++.+.. ..++++.+ .+.+++..+|+.||++++||..||+|++.+|||+|
T Consensus 330 i~G~g-----~--~~~~~~~~~~~~~~~--------~~v~~~~~-~~~~~~~~~~~~aDv~l~pS~~E~~gl~~lEAma~ 393 (476)
T cd03791 330 ILGSG-----D--PEYEEALRELAARYP--------GRVAVLIG-YDEALAHLIYAGADFFLMPSRFEPCGLTQMYAMRY 393 (476)
T ss_pred EEecC-----C--HHHHHHHHHHHHhCC--------CcEEEEEe-CCHHHHHHHHHhCCEEECCCCCCCCcHHHHHHhhC
Confidence 77743 1 234555666555431 12555554 45777789999999999999999999999999999
Q ss_pred ecCCCCCCCCCCCCCCCCceEEecCCccccccc-C--------CceeeCCCCHHHHHHHHHHHHcCC--HHHHHHHHHHH
Q 003025 456 RQGVSGSESSSESSAPKKSMLVVSEFIGCSPSL-S--------GAIRVNPWNIEATAEAMHEAIQMN--EAEKQLRHEKH 524 (856)
Q Consensus 456 ~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l-~--------~al~VnP~d~~~~A~ai~~aL~m~--~~er~~r~~~~ 524 (856)
+. |+|+|..+|..+.+ + +|++|.|.|+++++++|.+++++. ++++....++.
T Consensus 394 G~-----------------pvI~~~~gg~~e~v~~~~~~~~~~~G~~~~~~~~~~l~~~i~~~l~~~~~~~~~~~~~~~~ 456 (476)
T cd03791 394 GT-----------------VPIVRATGGLADTVIDYNEDTGEGTGFVFEGYNADALLAALRRALALYRDPEAWRKLQRNA 456 (476)
T ss_pred CC-----------------CCEECcCCCccceEeCCcCCCCCCCeEEeCCCCHHHHHHHHHHHHHHHcCHHHHHHHHHHH
Confidence 54 99999999999988 3 599999999999999999998642 23333333332
Q ss_pred hhhhhcCCHHHHHHHHHHH
Q 003025 525 YRYVSTHDVAYWARSFFQD 543 (856)
Q Consensus 525 ~~~v~~~~~~~W~~~~l~~ 543 (856)
.+ ..+++..-++++++-
T Consensus 457 ~~--~~fsw~~~a~~~~~~ 473 (476)
T cd03791 457 MA--QDFSWDRSAKEYLEL 473 (476)
T ss_pred hc--cCCChHHHHHHHHHH
Confidence 22 346777777766654
|
Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms. |
| >TIGR03088 stp2 sugar transferase, PEP-CTERM/EpsH1 system associated | Back alignment and domain information |
|---|
Probab=99.86 E-value=3.4e-20 Score=208.93 Aligned_cols=207 Identities=14% Similarity=0.172 Sum_probs=157.9
Q ss_pred EEEEEeecccCchHHHHHhcCchHHHHHHHHHHHc--CCCeEEEeccCccccCCHHHHHHHHHHHHHhCCCCcCceEEEE
Q 003025 299 VGIKIMPVGIHMGQIESVLRLADKDWRVQELKQQF--EGKTVLLGVDDMDIFKGVDLKLLAMEHLLKQHPKWQGRAVLVQ 376 (856)
Q Consensus 299 ~~i~i~p~GId~~~~~~~~~~~~~~~~~~~l~~~~--~~k~iil~VdRld~~KGi~~~l~A~~~ll~~~p~~~~~vvLvq 376 (856)
.++.++|+|||.+.|.+... . .....++.+ .++.+|+++||+++.||+..+++|+..+++++|+...++.|+.
T Consensus 160 ~~~~vi~ngvd~~~~~~~~~---~--~~~~~~~~~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~~~~~~~~~l~i 234 (374)
T TIGR03088 160 AKIHQIYNGVDTERFHPSRG---D--RSPILPPDFFADESVVVGTVGRLQAVKDQPTLVRAFALLVRQLPEGAERLRLVI 234 (374)
T ss_pred hhEEEeccCccccccCCCcc---c--hhhhhHhhcCCCCCeEEEEEecCCcccCHHHHHHHHHHHHHhCcccccceEEEE
Confidence 35677899999987753211 1 111112222 4678999999999999999999999999999987666788998
Q ss_pred EecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCcccEEEEcCCCCHHHHHHHHHhcceeeeccccccCCCcccceeeee
Q 003025 377 IANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDKPVTLSERAAYYTIAECVVVTAVRDGMNLTPYEYIVCR 456 (856)
Q Consensus 377 i~~p~r~~~~~~~~l~~~~~~lv~~IN~~~~~~~~~pvv~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~a~~ 456 (856)
+|. |+..++++ +.+++. +....+++.|. .+++..+|+.||++|+||..||||++++|||+|+
T Consensus 235 ~G~-----g~~~~~~~----~~~~~~-------~~~~~v~~~g~--~~~~~~~~~~adi~v~pS~~Eg~~~~~lEAma~G 296 (374)
T TIGR03088 235 VGD-----GPARGACE----QMVRAA-------GLAHLVWLPGE--RDDVPALMQALDLFVLPSLAEGISNTILEAMASG 296 (374)
T ss_pred ecC-----CchHHHHH----HHHHHc-------CCcceEEEcCC--cCCHHHHHHhcCEEEeccccccCchHHHHHHHcC
Confidence 874 33333343 333332 34456777774 5789999999999999999999999999999995
Q ss_pred cCCCCCCCCCCCCCCCCceEEecCCcccccccC---CceeeCCCCHHHHHHHHHHHHcCCHHHHHHHHHHHhhhh-hcCC
Q 003025 457 QGVSGSESSSESSAPKKSMLVVSEFIGCSPSLS---GAIRVNPWNIEATAEAMHEAIQMNEAEKQLRHEKHYRYV-STHD 532 (856)
Q Consensus 457 ~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~al~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v-~~~~ 532 (856)
. |+|+|+.+|..+.+. .|++++|.|++++|++|.++++. ++++....++.++++ ..++
T Consensus 297 ~-----------------Pvv~s~~~g~~e~i~~~~~g~~~~~~d~~~la~~i~~l~~~-~~~~~~~~~~a~~~~~~~fs 358 (374)
T TIGR03088 297 L-----------------PVIATAVGGNPELVQHGVTGALVPPGDAVALARALQPYVSD-PAARRAHGAAGRARAEQQFS 358 (374)
T ss_pred C-----------------CEEEcCCCCcHHHhcCCCceEEeCCCCHHHHHHHHHHHHhC-HHHHHHHHHHHHHHHHHhCC
Confidence 5 999999999998883 38999999999999999999974 455555666777776 5789
Q ss_pred HHHHHHHHHHHHHH
Q 003025 533 VAYWARSFFQDMER 546 (856)
Q Consensus 533 ~~~W~~~~l~~l~~ 546 (856)
+...++++.+-..+
T Consensus 359 ~~~~~~~~~~~y~~ 372 (374)
T TIGR03088 359 INAMVAAYAGLYDQ 372 (374)
T ss_pred HHHHHHHHHHHHHH
Confidence 88888887765543
|
Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate. |
| >cd03800 GT1_Sucrose_synthase This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.86 E-value=4.6e-20 Score=208.51 Aligned_cols=284 Identities=20% Similarity=0.203 Sum_probs=200.3
Q ss_pred CEEEEeCcccchHHHHHHhhcCCCeEEEEEccCCCChHHHhcC-----C-chH-HHHHHhHhCCEEcccCHHHHHHHHHH
Q 003025 202 DYVWIHDYHLMVLPTFLRRRFTRLRMGFFLHSPFPSSEIYRTL-----P-VRE-EILKALLNADLIGFHTFDYARHFLSC 274 (856)
Q Consensus 202 D~VwihDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~~~~l-----p-~r~-eil~~ll~~dligf~t~~~~~~Fl~~ 274 (856)
|+|.+|++....+...+.+. .++++.+..|............ + .+. .....+..+|.+.+.+......+...
T Consensus 103 Div~~~~~~~~~~~~~~~~~-~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~s~~~~~~~~~~ 181 (398)
T cd03800 103 DLIHAHYWDSGLVALLLARR-LGIPLVHTFHSLGAVKRRHLGAADTYEPARRIEAEERLLRAADRVIASTPQEAEELYSL 181 (398)
T ss_pred cEEEEecCccchHHHHHHhh-cCCceEEEeecccccCCcccccccccchhhhhhHHHHHHhhCCEEEEcCHHHHHHHHHH
Confidence 99999998777766666544 4788999999765422111000 0 011 11234557899988887666555431
Q ss_pred HHhhhCceecccCceeeEEECCEEEEEEEeecccCchHHHHHhcCchHHHHHHHHHHHcCCCeEEEeccCccccCCHHHH
Q 003025 275 CSRMLGLEYQSKRGYIGLEYYGRTVGIKIMPVGIHMGQIESVLRLADKDWRVQELKQQFEGKTVLLGVDDMDIFKGVDLK 354 (856)
Q Consensus 275 ~~r~lg~~~~~~~~~~~~~~~gr~~~i~i~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~k~iil~VdRld~~KGi~~~ 354 (856)
.+ ....++.++|+|+|...+...... .....++. ...++.+|+++||+++.||+..+
T Consensus 182 ----~~---------------~~~~~~~vi~ng~~~~~~~~~~~~---~~~~~~~~-~~~~~~~i~~~gr~~~~k~~~~l 238 (398)
T cd03800 182 ----YG---------------AYPRRIRVVPPGVDLERFTPYGRA---EARRARLL-RDPDKPRILAVGRLDPRKGIDTL 238 (398)
T ss_pred ----cc---------------ccccccEEECCCCCccceecccch---hhHHHhhc-cCCCCcEEEEEcccccccCHHHH
Confidence 00 111236789999998877532211 11111111 11467899999999999999999
Q ss_pred HHHHHHHHHhCCCCcCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCcccEEEEcCCCCHHHHHHHHHhcc
Q 003025 355 LLAMEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDKPVTLSERAAYYTIAE 434 (856)
Q Consensus 355 l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~~~~lv~~IN~~~~~~~~~pvv~~~~~v~~~el~aly~~AD 434 (856)
++|+..+.+++|+++ |+.+|....... .....+++.++++. +..+.+.+.+.++.+++..+|+.||
T Consensus 239 l~a~~~l~~~~~~~~----l~i~G~~~~~~~---~~~~~~~~~~~~~~-------~~~~~v~~~g~~~~~~~~~~~~~ad 304 (398)
T cd03800 239 IRAYAELPELRERAN----LVIVGGPRDDIL---AMDEEELRELAREL-------GVIDRVDFPGRVSREDLPALYRAAD 304 (398)
T ss_pred HHHHHHHHHhCCCeE----EEEEECCCCcch---hhhhHHHHHHHHhc-------CCCceEEEeccCCHHHHHHHHHhCC
Confidence 999999988877654 888886442221 22233445555443 2334566788999999999999999
Q ss_pred eeeeccccccCCCcccceeeeecCCCCCCCCCCCCCCCCceEEecCCcccccccC---CceeeCCCCHHHHHHHHHHHHc
Q 003025 435 CVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIGCSPSLS---GAIRVNPWNIEATAEAMHEAIQ 511 (856)
Q Consensus 435 v~vvtS~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~al~VnP~d~~~~A~ai~~aL~ 511 (856)
++++||..||+|++++|||+|+. |+|+|+.+|..+.+. .|++++|.|+++++++|.++++
T Consensus 305 i~l~ps~~e~~~~~l~Ea~a~G~-----------------Pvi~s~~~~~~e~i~~~~~g~~~~~~~~~~l~~~i~~l~~ 367 (398)
T cd03800 305 VFVNPALYEPFGLTALEAMACGL-----------------PVVATAVGGPRDIVVDGVTGLLVDPRDPEALAAALRRLLT 367 (398)
T ss_pred EEEecccccccCcHHHHHHhcCC-----------------CEEECCCCCHHHHccCCCCeEEeCCCCHHHHHHHHHHHHh
Confidence 99999999999999999999955 999999999998883 3899999999999999999997
Q ss_pred CCHHHHHHHHHHHhhhh-hcCCHHHHHHHHH
Q 003025 512 MNEAEKQLRHEKHYRYV-STHDVAYWARSFF 541 (856)
Q Consensus 512 m~~~er~~r~~~~~~~v-~~~~~~~W~~~~l 541 (856)
. +++++...++.++++ +.+++..++++++
T Consensus 368 ~-~~~~~~~~~~a~~~~~~~~s~~~~~~~~~ 397 (398)
T cd03800 368 D-PALRRRLSRAGLRRARARYTWERVAARLL 397 (398)
T ss_pred C-HHHHHHHHHHHHHHHHHhCCHHHHHHHHh
Confidence 5 455555666667777 7789888888765
|
The sucrose-phosphate synthases in this family may be unique to plants and photosynthetic bacteria. This enzyme catalyzes the synthesis of sucrose 6-phosphate from fructose 6-phosphate and uridine 5'-diphosphate-glucose, a key regulatory step of sucrose metabolism. The activity of this enzyme is regulated by phosphorylation and moderated by the concentration of various metabolites and light. |
| >TIGR02470 sucr_synth sucrose synthase | Back alignment and domain information |
|---|
Probab=99.86 E-value=1.1e-19 Score=216.14 Aligned_cols=338 Identities=12% Similarity=0.117 Sum_probs=206.1
Q ss_pred hHhHHHHHHHHHHHHHHHHHHcCCCCCEEEEeCcccchHHHHHHhhcCCCeEEEEEccCCC----ChHH-HhcCC-----
Q 003025 176 RSLWEAYVSANKIFSQRVIEVINPEDDYVWIHDYHLMVLPTFLRRRFTRLRMGFFLHSPFP----SSEI-YRTLP----- 245 (856)
Q Consensus 176 ~~~w~~Y~~vN~~fa~~i~~~~~~~~D~VwihDyhl~llp~~lr~~~~~~~i~~flH~PfP----~~e~-~~~lp----- 245 (856)
.+.|......+...++.+........|+|+.|...=-++...|+++. +++..+..|+.=. .+.. +....
T Consensus 361 ~~l~p~l~~f~~~~~~~~~~~~~~~pDlIHahy~d~glva~lla~~l-gVP~v~t~HsL~~~K~~~~g~~~~~~e~~~~~ 439 (784)
T TIGR02470 361 FEIWPYLETFAEDAEKEILAELQGKPDLIIGNYSDGNLVASLLARKL-GVTQCTIAHALEKTKYPDSDIYWQEFEDKYHF 439 (784)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCCCEEEECCCchHHHHHHHHHhc-CCCEEEECCcchhhcccccccccccchhHHHh
Confidence 45677777777777776655443223999999766666777776655 6888888885411 1110 01011
Q ss_pred -ch-HHHHHHhHhCCEEcccCHHHHHHHHHHHHhhhCceecc-cCceeeEEECC---EEEEEEEeecccCchHHHHHhcC
Q 003025 246 -VR-EEILKALLNADLIGFHTFDYARHFLSCCSRMLGLEYQS-KRGYIGLEYYG---RTVGIKIMPVGIHMGQIESVLRL 319 (856)
Q Consensus 246 -~r-~eil~~ll~~dligf~t~~~~~~Fl~~~~r~lg~~~~~-~~~~~~~~~~g---r~~~i~i~p~GId~~~~~~~~~~ 319 (856)
.+ +.=+..|-.||.|--.|+.-...-...+.. .+..... ..+...+ .+| ..-++.++|+|+|+..|.+....
T Consensus 440 ~~r~~ae~~~~~~AD~IItsT~qEi~~~~~~v~q-Y~s~~~ft~p~Ly~v-vnGid~~~~Ki~VVpPGVD~~iF~P~~~~ 517 (784)
T TIGR02470 440 SCQFTADLIAMNAADFIITSTYQEIAGTKDSVGQ-YESHQAFTMPGLYRV-VHGIDVFDPKFNIVSPGADESIYFPYSDK 517 (784)
T ss_pred hhhhhHHHHHHhcCCEEEECcHHHhhhhhhhhhh-hhhcccccccceeee-ecCccCCcCCeEEECCCcChhhcCCCCch
Confidence 01 001255667888876664221110000000 0000000 0010111 111 12377889999999988653221
Q ss_pred chHH-HHH----------HHHHHHc-----CCCeEEEeccCccccCCHHHHHHHHHHHHHhCCCCcCceEEEEEecCCCC
Q 003025 320 ADKD-WRV----------QELKQQF-----EGKTVLLGVDDMDIFKGVDLKLLAMEHLLKQHPKWQGRAVLVQIANPARG 383 (856)
Q Consensus 320 ~~~~-~~~----------~~l~~~~-----~~k~iil~VdRld~~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~ 383 (856)
.... ... ...++.+ +++++|++|+|+++.||+..+++||.++.+..+ .+.||+||.+...
T Consensus 518 ~~r~~~~~~~ie~ll~~~~~~~~~~G~l~d~~kpiIl~VGRL~~~KGid~LIeA~~~l~~l~~----~~~LVIVGGg~~~ 593 (784)
T TIGR02470 518 EKRLTNLHPEIEELLFSLEDNDEHYGYLKDPNKPIIFSMARLDRVKNLTGLVECYGRSPKLRE----LVNLVVVAGKLDA 593 (784)
T ss_pred hhhhhhhhcchhhhccchhhHHHHhCCCCCCCCcEEEEEeCCCccCCHHHHHHHHHHhHhhCC----CeEEEEEeCCccc
Confidence 1000 000 0112222 468899999999999999999999987644333 4568888864321
Q ss_pred ---CchhHHHHHHHHHHHHHHHhcccCCCCcccEEEEcCC-CCHHHHHHHHH----hcceeeeccccccCCCcccceeee
Q 003025 384 ---RGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDKP-VTLSERAAYYT----IAECVVVTAVRDGMNLTPYEYIVC 455 (856)
Q Consensus 384 ---~~~~~~~l~~~~~~lv~~IN~~~~~~~~~pvv~~~~~-v~~~el~aly~----~ADv~vvtS~~EG~nLv~~Ea~a~ 455 (856)
...+..+..+++.+++++.+- ...+.+.|. .+..++..+|+ .+||||+||.+||||||++|||||
T Consensus 594 ~~s~d~ee~~~i~~L~~la~~~gL-------~g~V~flG~~~~~~~~~elyr~iAd~adVfV~PS~~EpFGLvvLEAMAc 666 (784)
T TIGR02470 594 KESKDREEQAEIEKMHNLIDQYQL-------HGQIRWIGAQLNRVRNGELYRYIADTKGIFVQPALYEAFGLTVLEAMTC 666 (784)
T ss_pred ccccchhHHHHHHHHHHHHHHhCC-------CCeEEEccCcCCcccHHHHHHHhhccCcEEEECCcccCCCHHHHHHHHc
Confidence 111222234556666665432 223445554 35556666665 247999999999999999999999
Q ss_pred ecCCCCCCCCCCCCCCCCceEEecCCcccccccC---CceeeCCCCHHHHHHHHHHHHc---CCHHHHHHHHHHHhhhh-
Q 003025 456 RQGVSGSESSSESSAPKKSMLVVSEFIGCSPSLS---GAIRVNPWNIEATAEAMHEAIQ---MNEAEKQLRHEKHYRYV- 528 (856)
Q Consensus 456 ~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~al~VnP~d~~~~A~ai~~aL~---m~~~er~~r~~~~~~~v- 528 (856)
+. |+|+|..+|+.+.+. .|++|+|.|++++|++|.++++ .+++.+....++.++++
T Consensus 667 Gl-----------------PVVAT~~GG~~EiV~dg~tGfLVdp~D~eaLA~aL~~ll~kll~dp~~~~~ms~~a~~rV~ 729 (784)
T TIGR02470 667 GL-----------------PTFATRFGGPLEIIQDGVSGFHIDPYHGEEAAEKIVDFFEKCDEDPSYWQKISQGGLQRIY 729 (784)
T ss_pred CC-----------------CEEEcCCCCHHHHhcCCCcEEEeCCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHH
Confidence 54 999999999999883 4899999999999999999874 34555555666666766
Q ss_pred hcCCHHHHHHHHHHHH
Q 003025 529 STHDVAYWARSFFQDM 544 (856)
Q Consensus 529 ~~~~~~~W~~~~l~~l 544 (856)
+.++|...+++++.-+
T Consensus 730 ~~FSW~~~A~~ll~l~ 745 (784)
T TIGR02470 730 EKYTWKIYSERLLTLA 745 (784)
T ss_pred HhCCHHHHHHHHHHHH
Confidence 5689888888877654
|
This model represents sucrose synthase, an enzyme that, despite its name, generally uses rather produces sucrose. Sucrose plus UDP (or ADP) becomes D-fructose plus UDP-glucose (or ADP-glucose), which is then available for cell wall (or starch) biosynthesis. The enzyme is homologous to sucrose phosphate synthase, which catalyzes the penultimate step in sucrose synthesis. Sucrose synthase is found, so far, exclusively in plants and cyanobacteria. |
| >TIGR02149 glgA_Coryne glycogen synthase, Corynebacterium family | Back alignment and domain information |
|---|
Probab=99.86 E-value=8.5e-20 Score=206.39 Aligned_cols=285 Identities=15% Similarity=0.137 Sum_probs=199.4
Q ss_pred CCEEEEeCcccchHHHHHHhhcCCCeEEEEEccCCCChHHH-----hcCCchHHH-HHHhHhCCEEcccCHHHHHHHHHH
Q 003025 201 DDYVWIHDYHLMVLPTFLRRRFTRLRMGFFLHSPFPSSEIY-----RTLPVREEI-LKALLNADLIGFHTFDYARHFLSC 274 (856)
Q Consensus 201 ~D~VwihDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~~-----~~lp~r~ei-l~~ll~~dligf~t~~~~~~Fl~~ 274 (856)
.|+|++|++...+.+.++ ++..++|+.+.+|..+|..... ........+ ...+-.+|.|-..+....+.+.+.
T Consensus 84 ~divh~~~~~~~~~~~~~-~~~~~~p~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~~S~~~~~~~~~~ 162 (388)
T TIGR02149 84 ADVVHSHTWYTFLAGHLA-KKLYDKPLVVTAHSLEPLRPWKEEQLGGGYKLSSWAEKTAIEAADRVIAVSGGMREDILKY 162 (388)
T ss_pred CCeEeecchhhhhHHHHH-HHhcCCCEEEEeecccccccccccccccchhHHHHHHHHHHhhCCEEEEccHHHHHHHHHH
Confidence 499999998876555544 4456889999999876532111 000001111 223456787777776555555431
Q ss_pred HHhhhCceecccCceeeEEECCEEEEEEEeecccCchHHHHHhcCchHHHHHHHHHHHc---CCCeEEEeccCccccCCH
Q 003025 275 CSRMLGLEYQSKRGYIGLEYYGRTVGIKIMPVGIHMGQIESVLRLADKDWRVQELKQQF---EGKTVLLGVDDMDIFKGV 351 (856)
Q Consensus 275 ~~r~lg~~~~~~~~~~~~~~~gr~~~i~i~p~GId~~~~~~~~~~~~~~~~~~~l~~~~---~~k~iil~VdRld~~KGi 351 (856)
. -+. ...++.++|+|+|...+.+. . ...+++++ .++++|+++||+.+.||+
T Consensus 163 ~---~~~---------------~~~~i~vi~ng~~~~~~~~~----~----~~~~~~~~~~~~~~~~i~~~Grl~~~Kg~ 216 (388)
T TIGR02149 163 Y---PDL---------------DPEKVHVIYNGIDTKEYKPD----D----GNVVLDRYGIDRSRPYILFVGRITRQKGV 216 (388)
T ss_pred c---CCC---------------CcceEEEecCCCChhhcCCC----c----hHHHHHHhCCCCCceEEEEEcccccccCH
Confidence 0 010 12356788999998877521 1 12233333 467799999999999999
Q ss_pred HHHHHHHHHHHHhCCCCcCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCcccEEEEcCCCCHHHHHHHHH
Q 003025 352 DLKLLAMEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDKPVTLSERAAYYT 431 (856)
Q Consensus 352 ~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~~~~lv~~IN~~~~~~~~~pvv~~~~~v~~~el~aly~ 431 (856)
..+++|++++. ++ +.|+.++.. ++..++.+++++.+...+... ..++++.+.++.+++..+|+
T Consensus 217 ~~li~a~~~l~---~~----~~l~i~g~g-----~~~~~~~~~~~~~~~~~~~~~-----~~v~~~~~~~~~~~~~~~~~ 279 (388)
T TIGR02149 217 PHLLDAVHYIP---KD----VQVVLCAGA-----PDTPEVAEEVRQAVALLDRNR-----TGIIWINKMLPKEELVELLS 279 (388)
T ss_pred HHHHHHHHHHh---hc----CcEEEEeCC-----CCcHHHHHHHHHHHHHhcccc-----CceEEecCCCCHHHHHHHHH
Confidence 99999999873 33 336665532 222345556666655544322 23677888999999999999
Q ss_pred hcceeeeccccccCCCcccceeeeecCCCCCCCCCCCCCCCCceEEecCCcccccccC---CceeeCCCCH------HHH
Q 003025 432 IAECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIGCSPSLS---GAIRVNPWNI------EAT 502 (856)
Q Consensus 432 ~ADv~vvtS~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~al~VnP~d~------~~~ 502 (856)
.||+||+||..||||++.+|||+|+. |+|+|..+|..+.+. .|++++|.|. +++
T Consensus 280 ~aDv~v~ps~~e~~g~~~lEA~a~G~-----------------PvI~s~~~~~~e~i~~~~~G~~~~~~~~~~~~~~~~l 342 (388)
T TIGR02149 280 NAEVFVCPSIYEPLGIVNLEAMACGT-----------------PVVASATGGIPEVVVDGETGFLVPPDNSDADGFQAEL 342 (388)
T ss_pred hCCEEEeCCccCCCChHHHHHHHcCC-----------------CEEEeCCCCHHHHhhCCCceEEcCCCCCcccchHHHH
Confidence 99999999999999999999999954 999999999888873 3899999999 999
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHhhhh-hcCCHHHHHHHHHHHHHHH
Q 003025 503 AEAMHEAIQMNEAEKQLRHEKHYRYV-STHDVAYWARSFFQDMERT 547 (856)
Q Consensus 503 A~ai~~aL~m~~~er~~r~~~~~~~v-~~~~~~~W~~~~l~~l~~~ 547 (856)
+++|.++++ ++++++...++.++++ ..+++..+++++++.++++
T Consensus 343 ~~~i~~l~~-~~~~~~~~~~~a~~~~~~~~s~~~~~~~~~~~y~~~ 387 (388)
T TIGR02149 343 AKAINILLA-DPELAKKMGIAGRKRAEEEFSWGSIAKKTVEMYRKV 387 (388)
T ss_pred HHHHHHHHh-CHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhh
Confidence 999999997 4555555566666665 5689999999988776653
|
This model describes Corynebacterium glutamicum GlgA and closely related proteins in several other species. This enzyme is required for glycogen biosynthesis and appears to replace the distantly related TIGR02095 family of ADP-glucose type glycogen synthase in Corynebacterium glutamicum, Mycobacterium tuberculosis, Bifidobacterium longum, and Streptomyces coelicolor. |
| >cd04951 GT1_WbdM_like This family is most closely related to the GT1 family of glycosyltransferases and is named after WbdM in Escherichia coli | Back alignment and domain information |
|---|
Probab=99.86 E-value=5.8e-20 Score=204.41 Aligned_cols=281 Identities=17% Similarity=0.203 Sum_probs=196.0
Q ss_pred HHHHHcCCCCCEEEEeCcccchHHHHHHhhcCCCeEEEEEccCCCChHHHhcCCchHHHHHHh-HhCCEEcccCHHHHHH
Q 003025 192 RVIEVINPEDDYVWIHDYHLMVLPTFLRRRFTRLRMGFFLHSPFPSSEIYRTLPVREEILKAL-LNADLIGFHTFDYARH 270 (856)
Q Consensus 192 ~i~~~~~~~~D~VwihDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~~~~lp~r~eil~~l-l~~dligf~t~~~~~~ 270 (856)
++++..+| |+|++|.+|..++..+++...+..++....|...+...+ +..+.+-. ..++.+...+....+.
T Consensus 73 ~~~~~~~p--div~~~~~~~~~~~~l~~~~~~~~~~v~~~h~~~~~~~~------~~~~~~~~~~~~~~~~~~s~~~~~~ 144 (360)
T cd04951 73 KILRQFKP--DVVHAHMFHANIFARLLRLFLPSPPLICTAHSKNEGGRL------RMLAYRLTDFLSDLTTNVSKEALDY 144 (360)
T ss_pred HHHHhcCC--CEEEEcccchHHHHHHHHhhCCCCcEEEEeeccCchhHH------HHHHHHHHhhccCceEEEcHHHHHH
Confidence 44566677 899999999888888887777777888888864332111 11111110 1134443344444444
Q ss_pred HHHHHHhhhCceecccCceeeEEECCEEEEEEEeecccCchHHHHHhcCchHHHHHHHHHHHc---CCCeEEEeccCccc
Q 003025 271 FLSCCSRMLGLEYQSKRGYIGLEYYGRTVGIKIMPVGIHMGQIESVLRLADKDWRVQELKQQF---EGKTVLLGVDDMDI 347 (856)
Q Consensus 271 Fl~~~~r~lg~~~~~~~~~~~~~~~gr~~~i~i~p~GId~~~~~~~~~~~~~~~~~~~l~~~~---~~k~iil~VdRld~ 347 (856)
|+.. + .-...++.++|+|+|...|.... .....+++++ +++++++++||+.+
T Consensus 145 ~~~~-----~--------------~~~~~~~~~i~ng~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~l~~g~~~~ 199 (360)
T cd04951 145 FIAS-----K--------------AFNANKSFVVYNGIDTDRFRKDP------ARRLKIRNALGVKNDTFVILAVGRLVE 199 (360)
T ss_pred HHhc-----c--------------CCCcccEEEEccccchhhcCcch------HHHHHHHHHcCcCCCCEEEEEEeeCch
Confidence 4321 0 00123567789999987764211 1223345554 46789999999999
Q ss_pred cCCHHHHHHHHHHHHHhCCCCcCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCcccEEEEcCCCCHHHHH
Q 003025 348 FKGVDLKLLAMEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDKPVTLSERA 427 (856)
Q Consensus 348 ~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~~~~lv~~IN~~~~~~~~~pvv~~~~~v~~~el~ 427 (856)
.||+..+++|+.++.+++|+++ |+++|. |+..++++ +.+.+.| ..+.+.+.+. .+++.
T Consensus 200 ~kg~~~li~a~~~l~~~~~~~~----l~i~G~-----g~~~~~~~----~~~~~~~-------~~~~v~~~g~--~~~~~ 257 (360)
T cd04951 200 AKDYPNLLKAFAKLLSDYLDIK----LLIAGD-----GPLRATLE----RLIKALG-------LSNRVKLLGL--RDDIA 257 (360)
T ss_pred hcCcHHHHHHHHHHHhhCCCeE----EEEEcC-----CCcHHHHH----HHHHhcC-------CCCcEEEecc--cccHH
Confidence 9999999999999999888755 777763 33333333 3333322 2334455555 46899
Q ss_pred HHHHhcceeeeccccccCCCcccceeeeecCCCCCCCCCCCCCCCCceEEecCCcccccccC-CceeeCCCCHHHHHHHH
Q 003025 428 AYYTIAECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIGCSPSLS-GAIRVNPWNIEATAEAM 506 (856)
Q Consensus 428 aly~~ADv~vvtS~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~-~al~VnP~d~~~~A~ai 506 (856)
.+|+.||++++||..||||++++|||+|+. |+|+|+.+|..+.+. .|+.++|.|++++|++|
T Consensus 258 ~~~~~ad~~v~~s~~e~~~~~~~Ea~a~G~-----------------PvI~~~~~~~~e~i~~~g~~~~~~~~~~~~~~i 320 (360)
T cd04951 258 AYYNAADLFVLSSAWEGFGLVVAEAMACEL-----------------PVVATDAGGVREVVGDSGLIVPISDPEALANKI 320 (360)
T ss_pred HHHHhhceEEecccccCCChHHHHHHHcCC-----------------CEEEecCCChhhEecCCceEeCCCCHHHHHHHH
Confidence 999999999999999999999999999955 999999999888884 58999999999999999
Q ss_pred HHHHcCCHHHHHHHHHHHhhhhhcCCHHHHHHHHHHHH
Q 003025 507 HEAIQMNEAEKQLRHEKHYRYVSTHDVAYWARSFFQDM 544 (856)
Q Consensus 507 ~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~l 544 (856)
.++++.++..+..+.++.....+.+++..+++++++-.
T Consensus 321 ~~ll~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~y 358 (360)
T cd04951 321 DEILKMSGEERDIIGARRERIVKKFSINSIVQQWLTLY 358 (360)
T ss_pred HHHHhCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHh
Confidence 99998777777666665334456789999988887643
|
In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have |
| >TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein | Back alignment and domain information |
|---|
Probab=99.86 E-value=1.3e-20 Score=197.08 Aligned_cols=196 Identities=17% Similarity=0.126 Sum_probs=124.2
Q ss_pred EEEEecCCCCCCCCCCCCCCCHHHHHHHHHHHhhCCCeEEEecCCChhhHHHhhcCCC-C-ccEEeeCCEEEEeCCC-cc
Q 003025 593 AILFDYDGTVMPQTSINKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSPCK-K-LGIAAEHGYFMRWSAD-EE 669 (856)
Q Consensus 593 lI~~DlDGTLl~~~~~~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~~~-~-lgliaenG~~I~~~~~-~~ 669 (856)
+|++|+||||++ +++.+++.++++|++| +++|+.|+++|||+...+..++..+. . .++|++||+.|+.... ..
T Consensus 1 ~i~~DlDGTLL~---~~~~~~~~~~~~l~~l-~~~gi~~~i~TgR~~~~~~~~~~~l~~~~~~~I~~NGa~i~~~~~~~~ 76 (221)
T TIGR02463 1 WVFSDLDGTLLD---SHSYDWQPAAPWLTRL-QEAGIPVILCTSKTAAEVEYLQKALGLTGDPYIAENGAAIHLEELWRE 76 (221)
T ss_pred CEEEeCCCCCcC---CCCCCcHHHHHHHHHH-HHCCCeEEEEcCCCHHHHHHHHHHcCCCCCcEEEeCCcEEEcCccccc
Confidence 589999999998 6665666799999997 88999999999999999999997764 2 4699999999986432 11
Q ss_pred e---EecCCCCcccHHHHHHHHHHHHhhcCCc-ceEEecc--------cceEE------eeecCCCCCCchhHHHHHHHH
Q 003025 670 W---QNCGQSVDFGWIQIAEPVMKLYTESTDG-SYIEIKE--------SALVW------HHRDADPGFGSSQAKELLDHL 731 (856)
Q Consensus 670 w---~~~~~~~~~~w~~~v~~i~~~~~~~~~G-s~ie~k~--------~~l~~------~~~~~dp~~~~~~a~el~~~L 731 (856)
+ .... ...+| +.+.++++...+...- ....... ..+.. ........+......+..+.+
T Consensus 77 ~~~~~~~~--~~~~~-~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (221)
T TIGR02463 77 EPGYPRII--LGISY-GIIRLVLETLSEELHFKFTPFDDLSDAEIAELTGLSGSQAALAQDREASVPLLWRDSDSRMPRF 153 (221)
T ss_pred CCCceEEe--cCCCH-HHHHHHHHHHHHHhCCCceehhhCCHHHHHHHhCcCHHHHHHHHhccCCccEEecCchhHHHHH
Confidence 1 1110 11122 2233333322111000 0000000 00000 000000000000012223333
Q ss_pred HHHhcCCCeEEEEcCeEEEEEeCCCCHHHHHHHHHHHhhhcCCCcceEEEEeCCchhHHHHHHcccc
Q 003025 732 ESVLANEPAAVKSGQFIVEVKPQGVSKGVVAEKIFTTMAESGRHADFVLCIGDDRSDEDMFEIIGNA 798 (856)
Q Consensus 732 ~~~l~~~~~~v~~g~~~vEI~p~gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~ 798 (856)
.+.+......+..+..++||.|.+++||.|++++++++ |++++++++|||+.||++||+.+|.+
T Consensus 154 ~~~l~~~~~~~~~~~~~~ei~~~~~~Kg~al~~l~~~l---gi~~~~vi~~GD~~NDi~ml~~ag~~ 217 (221)
T TIGR02463 154 TALLADLGLAIVQGNRFSHVLGASSSKGKAANWLKATY---NQPDVKTLGLGDGPNDLPLLEVADYA 217 (221)
T ss_pred HHHHHHcCCeEEecCCeeEEecCCCCHHHHHHHHHHHh---CCCCCcEEEECCCHHHHHHHHhCCce
Confidence 33333334555556789999999999999999999999 99999999999999999999999964
|
This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate. |
| >PLN00142 sucrose synthase | Back alignment and domain information |
|---|
Probab=99.86 E-value=8.2e-20 Score=217.21 Aligned_cols=333 Identities=13% Similarity=0.163 Sum_probs=204.1
Q ss_pred hHhHHHHHHHHHHHHHHHHHHcCCCCCEEEEeCcccchHHHHHHhhcCCCeEEEEEccC-----------CCChH-HHhc
Q 003025 176 RSLWEAYVSANKIFSQRVIEVINPEDDYVWIHDYHLMVLPTFLRRRFTRLRMGFFLHSP-----------FPSSE-IYRT 243 (856)
Q Consensus 176 ~~~w~~Y~~vN~~fa~~i~~~~~~~~D~VwihDyhl~llp~~lr~~~~~~~i~~flH~P-----------fP~~e-~~~~ 243 (856)
.+.|..-.+.+...++.+....+...|+|+-|.+.=-++...|+++. +++..+..|+- |...+ -|+.
T Consensus 384 e~l~p~L~~f~~~~~~~~~~~~~~~PDlIHaHYwdsg~vA~~La~~l-gVP~v~T~HsL~k~K~~~~~~~~~~~e~~y~~ 462 (815)
T PLN00142 384 FDVWPYLETFAEDAASEILAELQGKPDLIIGNYSDGNLVASLLAHKL-GVTQCTIAHALEKTKYPDSDIYWKKFDDKYHF 462 (815)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCCCEEEECCccHHHHHHHHHHHh-CCCEEEEcccchhhhccccCCcccccchhhhh
Confidence 46677777777777777655443123999999555556666666655 79999999942 21111 1111
Q ss_pred -CCchHHHHHHhHhCCEEcccCHHHHHHHHHHHHhhhCceecccCc---------eeeEEECCEEEEEEEeecccCchHH
Q 003025 244 -LPVREEILKALLNADLIGFHTFDYARHFLSCCSRMLGLEYQSKRG---------YIGLEYYGRTVGIKIMPVGIHMGQI 313 (856)
Q Consensus 244 -lp~r~eil~~ll~~dligf~t~~~~~~Fl~~~~r~lg~~~~~~~~---------~~~~~~~gr~~~i~i~p~GId~~~~ 313 (856)
+-...|.+ .|-.||.|--.|+.-....-... + .|.+-.+ .-+++++ .-++.++|+|+|...|
T Consensus 463 ~~r~~aE~~-a~~~Ad~IIasT~qEi~g~~~~i----~-qy~sh~~f~~p~L~rvv~GId~~--~~ki~VVppGvD~~~F 534 (815)
T PLN00142 463 SCQFTADLI-AMNHADFIITSTYQEIAGSKDTV----G-QYESHTAFTLPGLYRVVHGIDVF--DPKFNIVSPGADMSIY 534 (815)
T ss_pred hhchHHHHH-HHHhhhHHHhCcHHHHhcccchh----h-hhhcccccccchhhhhhcccccc--ccCeeEECCCCChhhc
Confidence 11111221 44566665544432211000000 0 0000000 0011111 1267789999999988
Q ss_pred HHHhcCc--------hHHHHH---HHHHHHc-----CCCeEEEeccCccccCCHHHHHHHHHHHHHhCCCCcCceEEEEE
Q 003025 314 ESVLRLA--------DKDWRV---QELKQQF-----EGKTVLLGVDDMDIFKGVDLKLLAMEHLLKQHPKWQGRAVLVQI 377 (856)
Q Consensus 314 ~~~~~~~--------~~~~~~---~~l~~~~-----~~k~iil~VdRld~~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi 377 (856)
.+..... ...... ...++.+ +++++|++|+|+++.||+..+++||.++.+..++ +.|+++
T Consensus 535 ~P~~~~~~rl~~l~n~I~~~l~~~~~~~e~lg~l~~~~kpvIl~VGRL~~~KGid~LIeA~a~l~~l~~~----~~LVIV 610 (815)
T PLN00142 535 FPYTEKQKRLTSLHPSIEELLYSPEQNDEHIGYLKDRKKPIIFSMARLDRVKNLTGLVEWYGKNKRLREL----VNLVVV 610 (815)
T ss_pred CCCChHHhhHHhhcccchhhcCChHHHHHHhCCccCCCCcEEEEEecCcccCCHHHHHHHHHHHHHhCCC----cEEEEE
Confidence 6421100 000000 0011111 3577999999999999999999999988666554 558888
Q ss_pred ecCCC-CCchhHH--HHHHHHHHHHHHHhcccCCCCcccEEEEc---CCCCHHHHHHHHH-hcceeeeccccccCCCccc
Q 003025 378 ANPAR-GRGKDLE--EIQAEIHATCKRINETFGRPGYEPVVFID---KPVTLSERAAYYT-IAECVVVTAVRDGMNLTPY 450 (856)
Q Consensus 378 ~~p~r-~~~~~~~--~l~~~~~~lv~~IN~~~~~~~~~pvv~~~---~~v~~~el~aly~-~ADv~vvtS~~EG~nLv~~ 450 (856)
|.+.. ...++.+ +..+++.+++++.+-. + .|.++. +..+..+++.+|+ ++|+||+||.+||||+|++
T Consensus 611 Ggg~d~~~s~d~ee~~el~~L~~La~~lgL~----~--~V~flG~~~~~~~~~eLyr~iadaaDVfVlPS~~EgFGLvvL 684 (815)
T PLN00142 611 GGFIDPSKSKDREEIAEIKKMHSLIEKYNLK----G--QFRWIAAQTNRVRNGELYRYIADTKGAFVQPALYEAFGLTVV 684 (815)
T ss_pred ECCccccccccHHHHHHHHHHHHHHHHcCCC----C--cEEEcCCcCCcccHHHHHHHHHhhCCEEEeCCcccCCCHHHH
Confidence 86411 1111211 1224455666654321 1 143332 2455678888777 5799999999999999999
Q ss_pred ceeeeecCCCCCCCCCCCCCCCCceEEecCCcccccccC---CceeeCCCCHHHHHHHHHHHHc---CCHHHHHHHHHHH
Q 003025 451 EYIVCRQGVSGSESSSESSAPKKSMLVVSEFIGCSPSLS---GAIRVNPWNIEATAEAMHEAIQ---MNEAEKQLRHEKH 524 (856)
Q Consensus 451 Ea~a~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~al~VnP~d~~~~A~ai~~aL~---m~~~er~~r~~~~ 524 (856)
|||||+. |+|+|..+|+.+.+. .|++|+|.|++++|++|.+++. .+++.+....++.
T Consensus 685 EAMA~Gl-----------------PVVATdvGG~~EIV~dG~tG~LV~P~D~eaLA~aI~~lLekLl~Dp~lr~~mg~~A 747 (815)
T PLN00142 685 EAMTCGL-----------------PTFATCQGGPAEIIVDGVSGFHIDPYHGDEAANKIADFFEKCKEDPSYWNKISDAG 747 (815)
T ss_pred HHHHcCC-----------------CEEEcCCCCHHHHhcCCCcEEEeCCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHH
Confidence 9999954 999999999999883 3899999999999999988763 3566666666676
Q ss_pred hhhh-hcCCHHHHHHHHHHHH
Q 003025 525 YRYV-STHDVAYWARSFFQDM 544 (856)
Q Consensus 525 ~~~v-~~~~~~~W~~~~l~~l 544 (856)
++.+ +.+++...++++++-.
T Consensus 748 r~rv~e~FSWe~~A~rll~L~ 768 (815)
T PLN00142 748 LQRIYECYTWKIYAERLLTLG 768 (815)
T ss_pred HHHHHHhCCHHHHHHHHHHHH
Confidence 7776 5689999888877644
|
|
| >PLN02382 probable sucrose-phosphatase | Back alignment and domain information |
|---|
Probab=99.85 E-value=2.6e-20 Score=210.98 Aligned_cols=230 Identities=15% Similarity=0.181 Sum_probs=148.8
Q ss_pred cCCcEEEEEecCCCCCCCCCCCCCCCHHHHHHH-HHHHhhCCCeEEEecCCChhhHHHhhcCCC---CccEEeeCCEEEE
Q 003025 588 RSKSRAILFDYDGTVMPQTSINKAPSQAVISII-NTLCNDARNTVFVVSGRGRDCLGKWFSPCK---KLGIAAEHGYFMR 663 (856)
Q Consensus 588 ~s~~rlI~~DlDGTLl~~~~~~~~~s~~~~~aL-~~L~~d~g~~V~I~TGR~~~~l~~~~~~~~---~lgliaenG~~I~ 663 (856)
.+.+.+|++|+||||++.. .++.++.....+| +++ .++|+.++++|||+...+.++...++ .-.+++.||+.|.
T Consensus 6 ~~~~~lI~sDLDGTLL~~~-~~~~~s~~~~~~l~~~~-~~~gi~fv~aTGR~~~~~~~l~~~~~l~~p~~~I~~nGt~I~ 83 (413)
T PLN02382 6 GSPRLMIVSDLDHTMVDHH-DPENLSLLRFNALWEAE-YRHDSLLVFSTGRSPTLYKELRKEKPLLTPDITIMSVGTEIA 83 (413)
T ss_pred CCCCEEEEEcCCCcCcCCC-CccchhHHHHHHHHHHh-hcCCeeEEEEcCCCHHHHHHHHHhCCCCCCCEEEEcCCcEEE
Confidence 4567899999999999822 1447776666665 775 78899999999999888777765432 1236778999998
Q ss_pred eCCCc----ceEecCCCCcccHHHH-HHHHHHHHhhcCCcceEEecccceEEeeecCCCCCCchhHHHHHHHHHHHhcCC
Q 003025 664 WSADE----EWQNCGQSVDFGWIQI-AEPVMKLYTESTDGSYIEIKESALVWHHRDADPGFGSSQAKELLDHLESVLANE 738 (856)
Q Consensus 664 ~~~~~----~w~~~~~~~~~~w~~~-v~~i~~~~~~~~~Gs~ie~k~~~l~~~~~~~dp~~~~~~a~el~~~L~~~l~~~ 738 (856)
..+.. .|.... +..|... +.+.+..|.........+.+..++.+...+. ...++.+.+.+.+...
T Consensus 84 ~~~~~~~d~~w~~~l---~~~w~~~~v~~~~~~~~~l~~q~~~~~~~~Ki~~~~~~~-------~~~~~~~~l~~~~~~~ 153 (413)
T PLN02382 84 YGESMVPDHGWVEYL---NKKWDREIVVEETSKFPELKLQPETEQRPHKVSFYVDKK-------KAQEVIKELSERLEKR 153 (413)
T ss_pred eCCCCccChhHHHHH---hccCChhhHHHHHhcCCCcccCCcccCCCeEEEEEechH-------HhHHHHHHHHHHHHhc
Confidence 75421 122111 1122211 1111111211111122223333444433221 1334455555555332
Q ss_pred ---CeEEEEcCeEEEEEeCCCCHHHHHHHHHHHhhhcCCCcceEEEEeCCchhHHHHHHccccccCCCCCCCccEEEEEe
Q 003025 739 ---PAAVKSGQFIVEVKPQGVSKGVVAEKIFTTMAESGRHADFVLCIGDDRSDEDMFEIIGNATSSGVLSSNASVFACTV 815 (856)
Q Consensus 739 ---~~~v~~g~~~vEI~p~gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~v 815 (856)
...+.++..++||.|+++|||.|+++|++++...|++++++++|||+.||++||+.++. ++|+|
T Consensus 154 g~~~~i~~s~~~~ldI~p~g~sKg~Al~~L~~~~~~~gi~~~~~iafGDs~NDleMl~~ag~-------------~gvam 220 (413)
T PLN02382 154 GLDVKIIYSGGIDLDVLPQGAGKGQALAYLLKKLKAEGKAPVNTLVCGDSGNDAELFSVPDV-------------YGVMV 220 (413)
T ss_pred CCcEEEEEECCcEEEEEeCCCCHHHHHHHHHHHhhhcCCChhcEEEEeCCHHHHHHHhcCCC-------------CEEEE
Confidence 24456888999999999999999999999986568899999999999999999999983 26777
Q ss_pred CCCc----c--------ccceEc---CChhHHHHHHHHHHHh
Q 003025 816 GQKP----S--------KAKYYL---DDAAEVVTMLEALAEA 842 (856)
Q Consensus 816 G~~~----s--------~A~y~l---~~~~eV~~~L~~L~~~ 842 (856)
||+. . .|++++ .+.+++.+.|+.+.-.
T Consensus 221 ~NA~~elk~~a~~~~~~~~~~~~a~~~~~~GI~~al~~f~l~ 262 (413)
T PLN02382 221 SNAQEELLQWYAENAKDNPKIIHATERCAAGIIQAIGHFNLG 262 (413)
T ss_pred cCCcHHHHHHHHhhccCCCcEEEcCCCCccHHHHHHHHhCCC
Confidence 7752 2 235553 2579999999998743
|
|
| >cd03806 GT1_ALG11_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.85 E-value=1e-19 Score=208.38 Aligned_cols=195 Identities=16% Similarity=0.108 Sum_probs=145.7
Q ss_pred EEEEeecccCchHHHHHhcCchHHHHHHHHHHHcCCCeEEEeccCccccCCHHHHHHHHHHHHHhCCCCc-CceEEEEEe
Q 003025 300 GIKIMPVGIHMGQIESVLRLADKDWRVQELKQQFEGKTVLLGVDDMDIFKGVDLKLLAMEHLLKQHPKWQ-GRAVLVQIA 378 (856)
Q Consensus 300 ~i~i~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~k~iil~VdRld~~KGi~~~l~A~~~ll~~~p~~~-~~vvLvqi~ 378 (856)
++.++++|+|.+.|.+.. . ....++.+|++++|+.+.||+...|+||.++.+++|+.. .++.|+++|
T Consensus 213 ~~~vi~~gvd~~~~~~~~---~---------~~~~~~~~il~vgr~~~~K~~~~li~A~~~l~~~~~~~~~~~~~lvivG 280 (419)
T cd03806 213 KPSIVYPPCDVEELLKLP---L---------DEKTRENQILSIAQFRPEKNHPLQLRAFAKLLKRLPEEIKEKIKLVLIG 280 (419)
T ss_pred CcEEEcCCCCHHHhcccc---c---------ccccCCcEEEEEEeecCCCCHHHHHHHHHHHHHhCcccccCceEEEEEc
Confidence 567789999988775221 0 012456799999999999999999999999999887631 246688888
Q ss_pred cCCCCCchhHHHHHHHHHHHHHHHhcccCCCCcccEEEEcCCCCHHHHHHHHHhcceeeeccccccCCCcccceeeeecC
Q 003025 379 NPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDKPVTLSERAAYYTIAECVVVTAVRDGMNLTPYEYIVCRQG 458 (856)
Q Consensus 379 ~p~r~~~~~~~~l~~~~~~lv~~IN~~~~~~~~~pvv~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~a~~~~ 458 (856)
.... .+..++.+++++++++.+ ..+.+.|.+.++.+++.++|+.||++|.||..||||++++|||||+.
T Consensus 281 ~~~~---~~~~~~~~~L~~~~~~l~-------l~~~V~f~g~v~~~~l~~~l~~adv~v~~s~~E~Fgi~~lEAMa~G~- 349 (419)
T cd03806 281 SCRN---EDDEKRVEDLKLLAKELG-------LEDKVEFVVNAPFEELLEELSTASIGLHTMWNEHFGIGVVEYMAAGL- 349 (419)
T ss_pred CCCC---cccHHHHHHHHHHHHHhC-------CCCeEEEecCCCHHHHHHHHHhCeEEEECCccCCcccHHHHHHHcCC-
Confidence 5321 111234556666666543 33456777899999999999999999999999999999999999954
Q ss_pred CCCCCCCCCCCCCCCceEEecCCccccc-ccC------CceeeCCCCHHHHHHHHHHHHcCCHHHHHHHHHHHhhhhhcC
Q 003025 459 VSGSESSSESSAPKKSMLVVSEFIGCSP-SLS------GAIRVNPWNIEATAEAMHEAIQMNEAEKQLRHEKHYRYVSTH 531 (856)
Q Consensus 459 ~~~~~~~~~~~~~~~g~lV~Se~~G~~~-~l~------~al~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~ 531 (856)
|+|+|..+|..+ .+. .|++++ |++++|++|.+++++++.+++.+.++.++....+
T Consensus 350 ----------------pvIa~~~ggp~~~iv~~~~~g~~G~l~~--d~~~la~ai~~ll~~~~~~~~~~~~~~~~~~~~f 411 (419)
T cd03806 350 ----------------IPLAHASGGPLLDIVVPWDGGPTGFLAS--TAEEYAEAIEKILSLSEEERLRIRRAARSSVKRF 411 (419)
T ss_pred ----------------cEEEEcCCCCchheeeccCCCCceEEeC--CHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhh
Confidence 899999888654 343 378874 9999999999999998877766544444444555
Q ss_pred CHHH
Q 003025 532 DVAY 535 (856)
Q Consensus 532 ~~~~ 535 (856)
+...
T Consensus 412 s~~~ 415 (419)
T cd03806 412 SDEE 415 (419)
T ss_pred CHHH
Confidence 5443
|
ALG11 in yeast is involved in adding the final 1,2-linked Man to the Man5GlcNAc2-PP-Dol synthesized on the cytosolic face of the ER. The deletion analysis of ALG11 was shown to block the early steps of core biosynthesis that takes place on the cytoplasmic face of the ER and lead to a defect in the assembly of lipid-linked oligosaccharides. |
| >cd03813 GT1_like_3 This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.85 E-value=9.4e-20 Score=212.24 Aligned_cols=300 Identities=15% Similarity=0.129 Sum_probs=201.1
Q ss_pred CcChHhHHHHHHHHHHHHHHHHHHcCCCCCEEEEeCcccchHHHHHHhhcCCCeEEEEEccCCCCh---HHHhc---CCc
Q 003025 173 RFDRSLWEAYVSANKIFSQRVIEVINPEDDYVWIHDYHLMVLPTFLRRRFTRLRMGFFLHSPFPSS---EIYRT---LPV 246 (856)
Q Consensus 173 ~~~~~~w~~Y~~vN~~fa~~i~~~~~~~~D~VwihDyhl~llp~~lr~~~~~~~i~~flH~PfP~~---e~~~~---lp~ 246 (856)
.|..-.|....-..-.+. .+...+ |+.|+|++|......++..+.++..+.|+.+..|--+|.. ++... .+.
T Consensus 148 ~~~~~~~~~~~~~~~l~~-~l~~~~-~~~dviH~~s~~~~g~~~~~~~~~~~~p~I~t~Hg~~~~e~~~~~~~~~~~~~~ 225 (475)
T cd03813 148 SFVDYFWTVRNMLSPLLA-AIARPL-PKADVYHAVSTGYAGLLGALAKARRGTPFLLTEHGIYTRERKIELLQADWEMSY 225 (475)
T ss_pred CHHHHHHHHHHHHHHHHH-HhccCC-CCCCEEeccCcchHHHHHHHHHHHhCCCEEEecCCccHHHHHHHHHhcccchHH
Confidence 344445543333333332 333333 3459999998776666676666666899999999755421 22211 000
Q ss_pred hHHH--------HH-HhHhCCEEcccCHHHHHHHHHHHHhhhCceecccCceeeEEECCEEEEEEEeecccCchHHHHHh
Q 003025 247 REEI--------LK-ALLNADLIGFHTFDYARHFLSCCSRMLGLEYQSKRGYIGLEYYGRTVGIKIMPVGIHMGQIESVL 317 (856)
Q Consensus 247 r~ei--------l~-~ll~~dligf~t~~~~~~Fl~~~~r~lg~~~~~~~~~~~~~~~gr~~~i~i~p~GId~~~~~~~~ 317 (856)
...+ .+ .+-.||.|...+... +..+. .++....++.++|+|||.+.|.+..
T Consensus 226 ~~~~~~~~~~~l~~~~~~~ad~Ii~~s~~~-~~~~~-------------------~~g~~~~ki~vIpNgid~~~f~~~~ 285 (475)
T cd03813 226 FRRLWIRFFESLGRLAYQAADRITTLYEGN-RERQI-------------------EDGADPEKIRVIPNGIDPERFAPAR 285 (475)
T ss_pred HHHHHHHHHHHHHHHHHHhCCEEEecCHHH-HHHHH-------------------HcCCCHHHeEEeCCCcCHHHcCCcc
Confidence 0111 01 112345444333221 11111 1122234677899999998875321
Q ss_pred cCchHHHHHHHHHHHcCCCeEEEeccCccccCCHHHHHHHHHHHHHhCCCCcCceEEEEEecCCCCCchhHHHHHHHHHH
Q 003025 318 RLADKDWRVQELKQQFEGKTVLLGVDDMDIFKGVDLKLLAMEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHA 397 (856)
Q Consensus 318 ~~~~~~~~~~~l~~~~~~k~iil~VdRld~~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~~~~ 397 (856)
. . ....++++|+++||+.+.||+..+++|+..+.++.|+++ |+++|... +..++.+++++
T Consensus 286 ~-----~------~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~p~~~----l~IvG~g~-----~~~~~~~e~~~ 345 (475)
T cd03813 286 R-----A------RPEKEPPVVGLIGRVVPIKDIKTFIRAAAIVRKKIPDAE----GWVIGPTD-----EDPEYAEECRE 345 (475)
T ss_pred c-----c------ccCCCCcEEEEEeccccccCHHHHHHHHHHHHHhCCCeE----EEEECCCC-----cChHHHHHHHH
Confidence 1 0 112467899999999999999999999999999888765 77777432 22355667777
Q ss_pred HHHHHhcccCCCCcccEEEEcCCCCHHHHHHHHHhcceeeeccccccCCCcccceeeeecCCCCCCCCCCCCCCCCceEE
Q 003025 398 TCKRINETFGRPGYEPVVFIDKPVTLSERAAYYTIAECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLV 477 (856)
Q Consensus 398 lv~~IN~~~~~~~~~pvv~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~g~lV 477 (856)
++++.+. .+.+.|.| ..++..+|+.||++|+||..|||+++++|||||+. |+|
T Consensus 346 li~~l~l-------~~~V~f~G---~~~v~~~l~~aDv~vlpS~~Eg~p~~vlEAma~G~-----------------PVV 398 (475)
T cd03813 346 LVESLGL-------EDNVKFTG---FQNVKEYLPKLDVLVLTSISEGQPLVILEAMAAGI-----------------PVV 398 (475)
T ss_pred HHHHhCC-------CCeEEEcC---CccHHHHHHhCCEEEeCchhhcCChHHHHHHHcCC-----------------CEE
Confidence 7777543 23555666 57899999999999999999999999999999955 999
Q ss_pred ecCCccccccc-C--------CceeeCCCCHHHHHHHHHHHHcCCHHHHHHHHHHHhhhhhc-CCHHHHHHHHHH
Q 003025 478 VSEFIGCSPSL-S--------GAIRVNPWNIEATAEAMHEAIQMNEAEKQLRHEKHYRYVST-HDVAYWARSFFQ 542 (856)
Q Consensus 478 ~Se~~G~~~~l-~--------~al~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~-~~~~~W~~~~l~ 542 (856)
+|+.+|+.+.+ . .|++|+|.|++++|++|.++++. +++++...++.++++.+ +++...++++.+
T Consensus 399 atd~g~~~elv~~~~~~~~g~~G~lv~~~d~~~la~ai~~ll~~-~~~~~~~~~~a~~~v~~~~s~~~~~~~y~~ 472 (475)
T cd03813 399 ATDVGSCRELIEGADDEALGPAGEVVPPADPEALARAILRLLKD-PELRRAMGEAGRKRVERYYTLERMIDSYRR 472 (475)
T ss_pred ECCCCChHHHhcCCcccccCCceEEECCCCHHHHHHHHHHHhcC-HHHHHHHHHHHHHHHHHhCCHHHHHHHHHH
Confidence 99999998888 3 38999999999999999999984 55666666777777766 466666666544
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog |
| >cd05844 GT1_like_7 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds | Back alignment and domain information |
|---|
Probab=99.85 E-value=1.5e-19 Score=202.28 Aligned_cols=274 Identities=17% Similarity=0.115 Sum_probs=191.5
Q ss_pred HHHHcCCCCCEEEEeCcccchHHHHHHhhcCCCeEEEEEccCC----CChHHHhcCCchHHHHH-HhHhCCEEcccCHHH
Q 003025 193 VIEVINPEDDYVWIHDYHLMVLPTFLRRRFTRLRMGFFLHSPF----PSSEIYRTLPVREEILK-ALLNADLIGFHTFDY 267 (856)
Q Consensus 193 i~~~~~~~~D~VwihDyhl~llp~~lr~~~~~~~i~~flH~Pf----P~~e~~~~lp~r~eil~-~ll~~dligf~t~~~ 267 (856)
+++..+| |+|++|+.+..+....+.+ ..++|+.+.+|.-. +.............+.+ .+-.+|.|-+.+...
T Consensus 77 ~~~~~~~--dvvh~~~~~~~~~~~~~~~-~~~~p~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~s~~~ 153 (367)
T cd05844 77 LLRRHRP--DLVHAHFGFDGVYALPLAR-RLGVPLVVTFHGFDATTSLALLLRSRWALYARRRRRLARRAALFIAVSQFI 153 (367)
T ss_pred HHHhhCC--CEEEeccCchHHHHHHHHH-HcCCCEEEEEeCccccccchhhcccchhHHHHHHHHHHHhcCEEEECCHHH
Confidence 5566677 8999997764443333333 34688988888422 11111110001112222 234578888777654
Q ss_pred HHHHHHHHHhhhCceecccCceeeEEECCEEEEEEEeecccCchHHHHHhcCchHHHHHHHHHHHcCCCeEEEeccCccc
Q 003025 268 ARHFLSCCSRMLGLEYQSKRGYIGLEYYGRTVGIKIMPVGIHMGQIESVLRLADKDWRVQELKQQFEGKTVLLGVDDMDI 347 (856)
Q Consensus 268 ~~~Fl~~~~r~lg~~~~~~~~~~~~~~~gr~~~i~i~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~k~iil~VdRld~ 347 (856)
.+.+.+. |. ...++.++|+|+|.+.+.+.. ...+++.++++||+.+
T Consensus 154 ~~~~~~~-----~~---------------~~~~i~vi~~g~d~~~~~~~~--------------~~~~~~~i~~~G~~~~ 199 (367)
T cd05844 154 RDRLLAL-----GF---------------PPEKVHVHPIGVDTAKFTPAT--------------PARRPPRILFVGRFVE 199 (367)
T ss_pred HHHHHHc-----CC---------------CHHHeEEecCCCCHHhcCCCC--------------CCCCCcEEEEEEeecc
Confidence 4444431 21 123466789999987764210 0134678999999999
Q ss_pred cCCHHHHHHHHHHHHHhCCCCcCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCcccEEEEcCCCCHHHHH
Q 003025 348 FKGVDLKLLAMEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDKPVTLSERA 427 (856)
Q Consensus 348 ~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~~~~lv~~IN~~~~~~~~~pvv~~~~~v~~~el~ 427 (856)
.||+..+++|+..+.+++|+++ |+++|. ++.. +++++++++. ++.+.+.+.+.++.+++.
T Consensus 200 ~K~~~~li~a~~~l~~~~~~~~----l~ivG~-----g~~~----~~~~~~~~~~-------~~~~~v~~~g~~~~~~l~ 259 (367)
T cd05844 200 KKGPLLLLEAFARLARRVPEVR----LVIIGD-----GPLL----AALEALARAL-------GLGGRVTFLGAQPHAEVR 259 (367)
T ss_pred ccChHHHHHHHHHHHHhCCCeE----EEEEeC-----chHH----HHHHHHHHHc-------CCCCeEEECCCCCHHHHH
Confidence 9999999999999998888654 887773 3332 3444444442 233456788899999999
Q ss_pred HHHHhcceeeeccc------cccCCCcccceeeeecCCCCCCCCCCCCCCCCceEEecCCcccccccC---CceeeCCCC
Q 003025 428 AYYTIAECVVVTAV------RDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIGCSPSLS---GAIRVNPWN 498 (856)
Q Consensus 428 aly~~ADv~vvtS~------~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~al~VnP~d 498 (856)
.+|+.||++++||. .||||++++|||+|+. |+|+|+.+|..+.+. .|++++|.|
T Consensus 260 ~~~~~ad~~v~ps~~~~~~~~E~~~~~~~EA~a~G~-----------------PvI~s~~~~~~e~i~~~~~g~~~~~~d 322 (367)
T cd05844 260 ELMRRARIFLQPSVTAPSGDAEGLPVVLLEAQASGV-----------------PVVATRHGGIPEAVEDGETGLLVPEGD 322 (367)
T ss_pred HHHHhCCEEEECcccCCCCCccCCchHHHHHHHcCC-----------------CEEEeCCCCchhheecCCeeEEECCCC
Confidence 99999999999997 5999999999999954 999999999988772 489999999
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHhhhh-hcCCHHHHHHHHH
Q 003025 499 IEATAEAMHEAIQMNEAEKQLRHEKHYRYV-STHDVAYWARSFF 541 (856)
Q Consensus 499 ~~~~A~ai~~aL~m~~~er~~r~~~~~~~v-~~~~~~~W~~~~l 541 (856)
+++++++|.++++. ++.+.....+.++++ ..+++..+++.+.
T Consensus 323 ~~~l~~~i~~l~~~-~~~~~~~~~~a~~~~~~~~s~~~~~~~l~ 365 (367)
T cd05844 323 VAALAAALGRLLAD-PDLRARMGAAGRRRVEERFDLRRQTAKLE 365 (367)
T ss_pred HHHHHHHHHHHHcC-HHHHHHHHHHHHHHHHHHCCHHHHHHHHh
Confidence 99999999999974 445555566677777 4688888887664
|
The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center |
| >PLN02423 phosphomannomutase | Back alignment and domain information |
|---|
Probab=99.84 E-value=1.8e-19 Score=191.12 Aligned_cols=211 Identities=18% Similarity=0.199 Sum_probs=138.0
Q ss_pred CcEEEEEecCCCCCCCCCCCCCCCHHHHHHHHHHHhhCCCeEEEecCCChhhHHHhhcCC-C-C-ccEEeeCCEEEEeCC
Q 003025 590 KSRAILFDYDGTVMPQTSINKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSPC-K-K-LGIAAEHGYFMRWSA 666 (856)
Q Consensus 590 ~~rlI~~DlDGTLl~~~~~~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~~-~-~-lgliaenG~~I~~~~ 666 (856)
+.+++++|+||||++ .++.+++++.++|++| ++. +.|+++|||+...+.+.++.. . . ..++++||+++...+
T Consensus 6 ~~~i~~~D~DGTLl~---~~~~i~~~~~~ai~~l-~~~-i~fviaTGR~~~~~~~~~~~~~~~~~~~~I~~NGa~i~~~g 80 (245)
T PLN02423 6 PGVIALFDVDGTLTA---PRKEATPEMLEFMKEL-RKV-VTVGVVGGSDLSKISEQLGKTVINDYDYVFSENGLVAHKDG 80 (245)
T ss_pred cceEEEEeccCCCcC---CCCcCCHHHHHHHHHH-HhC-CEEEEECCcCHHHHHHHhcccccccCCEEEECCceEEEeCC
Confidence 456777999999999 8889999999999998 555 999999999999998888653 1 1 368899999998655
Q ss_pred CcceEecCCC-CcccHHHHHHHHHHHHhh--------cCCcceEEecccceEEe--eecCCC-------C--CCchhHHH
Q 003025 667 DEEWQNCGQS-VDFGWIQIAEPVMKLYTE--------STDGSYIEIKESALVWH--HRDADP-------G--FGSSQAKE 726 (856)
Q Consensus 667 ~~~w~~~~~~-~~~~w~~~v~~i~~~~~~--------~~~Gs~ie~k~~~l~~~--~~~~dp-------~--~~~~~a~e 726 (856)
...+...... .+. +.+.++++...+ ...+.+++..+...... +.+... + .......+
T Consensus 81 ~~i~~~~l~~~l~~---~~~~~ii~~~~~~~~~~~i~~~~~~~ie~~~~i~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~ 157 (245)
T PLN02423 81 KLIGTQSLKSFLGE---DKLKEFINFTLHYIADLDIPIKRGTFIEFRSGMLNVSPIGRNCSQEERDEFEKYDKVHNIRPK 157 (245)
T ss_pred EEEEEecccccCCH---HHHHHHHHHHHHHHHHcCCccccCCeEEccCCccccCcccccCCHhHHhhHHhhCccchHHHH
Confidence 4433322111 111 222222222111 12244454332221111 111100 0 00122344
Q ss_pred HHHHHHHHhcCCC-eEEEEcCeEEEEEeCCCCHHHHHHHHHHHhhhcCCCcceEEEEeC----CchhHHHHHHccccccC
Q 003025 727 LLDHLESVLANEP-AAVKSGQFIVEVKPQGVSKGVVAEKIFTTMAESGRHADFVLCIGD----DRSDEDMFEIIGNATSS 801 (856)
Q Consensus 727 l~~~L~~~l~~~~-~~v~~g~~~vEI~p~gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD----~~ND~~Mf~~ag~~~~~ 801 (856)
+.+.+.+.+.+.. ..+.+|..++||+|+|+|||.|++.|+ +++++++||| +.||++||+.-|.
T Consensus 158 ~~~~l~~~~~~~~~~~s~~g~~~iDi~~~gvnKg~al~~L~--------~~~e~~aFGD~~~~~~ND~eMl~~~~~---- 225 (245)
T PLN02423 158 MVSVLREKFAHLNLTYSIGGQISFDVFPQGWDKTYCLQFLE--------DFDEIHFFGDKTYEGGNDHEIFESERT---- 225 (245)
T ss_pred HHHHHHHhCCCCcEEEecCCcEEEEEeeCCCCHHHHHHHhc--------CcCeEEEEeccCCCCCCcHHHHhCCCc----
Confidence 5555555554422 334455689999999999999999997 5799999999 8999999998664
Q ss_pred CCCCCCccEEEEEeCCCccccceEcCChhHHHHHHHHHH
Q 003025 802 GVLSSNASVFACTVGQKPSKAKYYLDDAAEVVTMLEALA 840 (856)
Q Consensus 802 ~~~~~~~~~~av~vG~~~s~A~y~l~~~~eV~~~L~~L~ 840 (856)
.+.+ +.+++++.++|+.+.
T Consensus 226 ---------~~~~-----------~~~~~~~~~~~~~~~ 244 (245)
T PLN02423 226 ---------IGHT-----------VTSPDDTREQCTALF 244 (245)
T ss_pred ---------ceEE-----------eCCHHHHHHHHHHhc
Confidence 2444 368899998888764
|
|
| >cd04962 GT1_like_5 This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.84 E-value=6.1e-19 Score=197.75 Aligned_cols=285 Identities=14% Similarity=0.155 Sum_probs=194.1
Q ss_pred HHHHHHHHHHcCCCCCEEEEeCcccchHHHHHHhhcC---CCeEEEEEccCCCChHHHhcCCch-HHHHHHhHhCCEEcc
Q 003025 187 KIFSQRVIEVINPEDDYVWIHDYHLMVLPTFLRRRFT---RLRMGFFLHSPFPSSEIYRTLPVR-EEILKALLNADLIGF 262 (856)
Q Consensus 187 ~~fa~~i~~~~~~~~D~VwihDyhl~llp~~lr~~~~---~~~i~~flH~PfP~~e~~~~lp~r-~eil~~ll~~dligf 262 (856)
+.+.+.+ +..+| |+|++|.+....++.++.++.. +.++.+.+|-.-.. ....-+.. .-+...+-.+|.|..
T Consensus 74 ~~l~~~i-~~~~~--divh~~~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~--~~~~~~~~~~~~~~~~~~~d~ii~ 148 (371)
T cd04962 74 SKIAEVA-KRYKL--DLLHVHYAVPHAVAAYLAREILGKKDLPVVTTLHGTDIT--LVGQDPSFQPATRFSIEKSDGVTA 148 (371)
T ss_pred HHHHHHH-hcCCc--cEEeecccCCccHHHHHHHHhcCcCCCcEEEEEcCCccc--cccccccchHHHHHHHhhCCEEEE
Confidence 4444444 45566 8999998776556665544332 67888888843111 11111211 222334567899988
Q ss_pred cCHHHHHHHHHHHHhhhCceecccCceeeEEECCEEEEEEEeecccCchHHHHHhcCchHHHHHHHHHHHc---CCCeEE
Q 003025 263 HTFDYARHFLSCCSRMLGLEYQSKRGYIGLEYYGRTVGIKIMPVGIHMGQIESVLRLADKDWRVQELKQQF---EGKTVL 339 (856)
Q Consensus 263 ~t~~~~~~Fl~~~~r~lg~~~~~~~~~~~~~~~gr~~~i~i~p~GId~~~~~~~~~~~~~~~~~~~l~~~~---~~k~ii 339 (856)
.+......+...+ +..-++.++|+|+|...+... + . ...++++ .+++++
T Consensus 149 ~s~~~~~~~~~~~--------------------~~~~~i~vi~n~~~~~~~~~~---~--~---~~~~~~~~~~~~~~~i 200 (371)
T cd04962 149 VSESLRQETYELF--------------------DITKEIEVIPNFVDEDRFRPK---P--D---EALKRRLGAPEGEKVL 200 (371)
T ss_pred cCHHHHHHHHHhc--------------------CCcCCEEEecCCcCHhhcCCC---c--h---HHHHHhcCCCCCCeEE
Confidence 8877665554311 111246778999998766421 1 1 1223333 468899
Q ss_pred EeccCccccCCHHHHHHHHHHHHHhCCCCcCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCcccEEEEcC
Q 003025 340 LGVDDMDIFKGVDLKLLAMEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDK 419 (856)
Q Consensus 340 l~VdRld~~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~~~~lv~~IN~~~~~~~~~pvv~~~~ 419 (856)
++++|+.+.||+..+++|++++.++ +++ .|+.+|. +++..++++ ++.+. +..+.+.+.+
T Consensus 201 l~~g~l~~~K~~~~li~a~~~l~~~-~~~----~l~i~G~-----g~~~~~~~~----~~~~~-------~~~~~v~~~g 259 (371)
T cd04962 201 IHISNFRPVKRIDDVIRIFAKVRKE-VPA----RLLLVGD-----GPERSPAER----LAREL-------GLQDDVLFLG 259 (371)
T ss_pred EEecccccccCHHHHHHHHHHHHhc-CCc----eEEEEcC-----CcCHHHHHH----HHHHc-------CCCceEEEec
Confidence 9999999999999999999988665 333 4777764 333333433 33332 2233444555
Q ss_pred CCCHHHHHHHHHhcceeeeccccccCCCcccceeeeecCCCCCCCCCCCCCCCCceEEecCCcccccccC---CceeeCC
Q 003025 420 PVTLSERAAYYTIAECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIGCSPSLS---GAIRVNP 496 (856)
Q Consensus 420 ~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~al~VnP 496 (856)
.. +++..+|+.||++|+||..||||++++|||+|+. |+|+|+.+|..+.+. .|++++|
T Consensus 260 ~~--~~~~~~~~~~d~~v~ps~~E~~~~~~~EAma~g~-----------------PvI~s~~~~~~e~i~~~~~G~~~~~ 320 (371)
T cd04962 260 KQ--DHVEELLSIADLFLLPSEKESFGLAALEAMACGV-----------------PVVASNAGGIPEVVKHGETGFLVDV 320 (371)
T ss_pred Cc--ccHHHHHHhcCEEEeCCCcCCCccHHHHHHHcCC-----------------CEEEeCCCCchhhhcCCCceEEcCC
Confidence 53 5799999999999999999999999999999955 999999999988883 4899999
Q ss_pred CCHHHHHHHHHHHHcCCHHHHHHHHHHHhhh-hhcCCHHHHHHHHHHHHH
Q 003025 497 WNIEATAEAMHEAIQMNEAEKQLRHEKHYRY-VSTHDVAYWARSFFQDME 545 (856)
Q Consensus 497 ~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~-v~~~~~~~W~~~~l~~l~ 545 (856)
.|++++|++|.++++. ++++....++.+++ ...+++...++++++-++
T Consensus 321 ~~~~~l~~~i~~l~~~-~~~~~~~~~~~~~~~~~~fs~~~~~~~~~~~y~ 369 (371)
T cd04962 321 GDVEAMAEYALSLLED-DELWQEFSRAARNRAAERFDSERIVPQYEALYR 369 (371)
T ss_pred CCHHHHHHHHHHHHhC-HHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 9999999999999974 45555556666766 566888888888876554
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog |
| >cd03819 GT1_WavL_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.84 E-value=2.9e-19 Score=198.81 Aligned_cols=269 Identities=20% Similarity=0.220 Sum_probs=191.4
Q ss_pred HHHcCCCCCEEEEeCcccchHHHHHHhhcCCCeEEEEEccCCCChHHHhcCCchHHHHHHhHhCCEEcccCHHHHHHHHH
Q 003025 194 IEVINPEDDYVWIHDYHLMVLPTFLRRRFTRLRMGFFLHSPFPSSEIYRTLPVREEILKALLNADLIGFHTFDYARHFLS 273 (856)
Q Consensus 194 ~~~~~~~~D~VwihDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~~~~lp~r~eil~~ll~~dligf~t~~~~~~Fl~ 273 (856)
++..+| |+|++|..+...+..++.+ ..++|+.+.+|-.++....+ ..+ +..+|.+-+.+....+.+.+
T Consensus 74 ~~~~~~--dii~~~~~~~~~~~~~~~~-~~~~~~i~~~h~~~~~~~~~------~~~---~~~~~~vi~~s~~~~~~~~~ 141 (355)
T cd03819 74 IREEKV--DIVHARSRAPAWSAYLAAR-RTRPPFVTTVHGFYSVNFRY------NAI---MARGDRVIAVSNFIADHIRE 141 (355)
T ss_pred HHHcCC--CEEEECCCchhHHHHHHHH-hcCCCEEEEeCCchhhHHHH------HHH---HHhcCEEEEeCHHHHHHHHH
Confidence 345566 8999998776555554443 34799999999776644311 222 34688887766544443331
Q ss_pred HHHhhhCceecccCceeeEEECCEEEEEEEeecccCchHHHHHhcCchHHHHHHHHHHHc---CCCeEEEeccCccccCC
Q 003025 274 CCSRMLGLEYQSKRGYIGLEYYGRTVGIKIMPVGIHMGQIESVLRLADKDWRVQELKQQF---EGKTVLLGVDDMDIFKG 350 (856)
Q Consensus 274 ~~~r~lg~~~~~~~~~~~~~~~gr~~~i~i~p~GId~~~~~~~~~~~~~~~~~~~l~~~~---~~k~iil~VdRld~~KG 350 (856)
..+. ...++.++|+|||...|......+ .....+++++ +++++++++||+.+.||
T Consensus 142 ----~~~~---------------~~~k~~~i~ngi~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~i~~~Gr~~~~Kg 199 (355)
T cd03819 142 ----NYGV---------------DPDRIRVIPRGVDLDRFDPGAVPP---ERILALAREWPLPKGKPVILLPGRLTRWKG 199 (355)
T ss_pred ----hcCC---------------ChhhEEEecCCccccccCccccch---HHHHHHHHHcCCCCCceEEEEeeccccccC
Confidence 1221 123567789999998775432211 1122244544 46789999999999999
Q ss_pred HHHHHHHHHHHHHhCCCCcCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCcccEEEEcCCCCHHHHHHHH
Q 003025 351 VDLKLLAMEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDKPVTLSERAAYY 430 (856)
Q Consensus 351 i~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~~~~lv~~IN~~~~~~~~~pvv~~~~~v~~~el~aly 430 (856)
+..+++|+..+.+++++++ |+.+|... ..+.+.+++.+.+.+.+ ..+.+.+.+. .+++..+|
T Consensus 200 ~~~li~~~~~l~~~~~~~~----l~ivG~~~-----~~~~~~~~~~~~~~~~~-------~~~~v~~~g~--~~~~~~~l 261 (355)
T cd03819 200 QEVFIEALARLKKDDPDVH----LLIVGDAQ-----GRRFYYAELLELIKRLG-------LQDRVTFVGH--CSDMPAAY 261 (355)
T ss_pred HHHHHHHHHHHHhcCCCeE----EEEEECCc-----ccchHHHHHHHHHHHcC-------CcceEEEcCC--cccHHHHH
Confidence 9999999999988767654 88887532 22334445544444432 2234455555 67899999
Q ss_pred Hhcceeeecc-ccccCCCcccceeeeecCCCCCCCCCCCCCCCCceEEecCCcccccccC---CceeeCCCCHHHHHHHH
Q 003025 431 TIAECVVVTA-VRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIGCSPSLS---GAIRVNPWNIEATAEAM 506 (856)
Q Consensus 431 ~~ADv~vvtS-~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~al~VnP~d~~~~A~ai 506 (856)
+.||++++|| ..||||++.+|||+|+. |+|+|..+|..+.+. .|++++|.|+++++++|
T Consensus 262 ~~ad~~i~ps~~~e~~~~~l~EA~a~G~-----------------PvI~~~~~~~~e~i~~~~~g~~~~~~~~~~l~~~i 324 (355)
T cd03819 262 ALADIVVSASTEPEAFGRTAVEAQAMGR-----------------PVIASDHGGARETVRPGETGLLVPPGDAEALAQAL 324 (355)
T ss_pred HhCCEEEecCCCCCCCchHHHHHHhcCC-----------------CEEEcCCCCcHHHHhCCCceEEeCCCCHHHHHHHH
Confidence 9999999999 78999999999999955 999999988888773 48999999999999999
Q ss_pred HHHHcCCHHHHHHHHHHHhhhhhcC
Q 003025 507 HEAIQMNEAEKQLRHEKHYRYVSTH 531 (856)
Q Consensus 507 ~~aL~m~~~er~~r~~~~~~~v~~~ 531 (856)
..++..+++++....++.++++.++
T Consensus 325 ~~~~~~~~~~~~~~~~~a~~~~~~~ 349 (355)
T cd03819 325 DQILSLLPEGRAKMFAKARMCVETL 349 (355)
T ss_pred HHHHhhCHHHHHHHHHHHHHHHHHh
Confidence 9888888888888888888877654
|
WavL in Vibrio cholerae has been shown to be involved in the biosynthesis of the lipopolysaccharide core. |
| >PLN02949 transferase, transferring glycosyl groups | Back alignment and domain information |
|---|
Probab=99.83 E-value=8.1e-19 Score=202.21 Aligned_cols=314 Identities=15% Similarity=0.155 Sum_probs=207.8
Q ss_pred cccccccccccccCCCCCCCCCCcChHhHHHHHHHHHHHHHHHHHHcCCCCCEEEEeCccc-chHHHHHHhhcCCCeEEE
Q 003025 151 FCKQHLWPLFHYMLPFSATHGGRFDRSLWEAYVSANKIFSQRVIEVINPEDDYVWIHDYHL-MVLPTFLRRRFTRLRMGF 229 (856)
Q Consensus 151 f~~~~lWpl~H~~~~~~~~~~~~~~~~~w~~Y~~vN~~fa~~i~~~~~~~~D~VwihDyhl-~llp~~lr~~~~~~~i~~ 229 (856)
+-..-.||-||.+. ..-+..|-++..+.+ +.| .|||----. ..+| ++| +.+.||+|
T Consensus 109 ~~~~~~~~~~t~~~--------~~~~~~~l~~~~~~~---------~~p---~v~vDt~~~~~~~p-l~~--~~~~~v~~ 165 (463)
T PLN02949 109 WIEEETYPRFTMIG--------QSLGSVYLAWEALCK---------FTP---LYFFDTSGYAFTYP-LAR--LFGCKVVC 165 (463)
T ss_pred ccccccCCceehHH--------HHHHHHHHHHHHHHh---------cCC---CEEEeCCCcccHHH-HHH--hcCCcEEE
Confidence 34556688877663 223677777776654 133 477741110 1223 344 44799999
Q ss_pred EEccCCCChHHHhcCCch-------------------HHH-------HH--HhHhCCEEcccCHHHHHHHHHHHHhhhCc
Q 003025 230 FLHSPFPSSEIYRTLPVR-------------------EEI-------LK--ALLNADLIGFHTFDYARHFLSCCSRMLGL 281 (856)
Q Consensus 230 flH~PfP~~e~~~~lp~r-------------------~ei-------l~--~ll~~dligf~t~~~~~~Fl~~~~r~lg~ 281 (856)
.+|-|--+.+....+-.+ +.+ +. .+-.+|.|-..+....+++.+ ..
T Consensus 166 yvH~p~~~~dm~~~v~~~~~~~~~~~~~a~~~~~~~~k~~Y~~~~~~l~~~~~~~ad~ii~nS~~t~~~l~~----~~-- 239 (463)
T PLN02949 166 YTHYPTISSDMISRVRDRSSMYNNDASIARSFWLSTCKILYYRAFAWMYGLVGRCAHLAMVNSSWTKSHIEA----LW-- 239 (463)
T ss_pred EEeCCcchHHHHHHHhhcccccCccchhhccchhHHHHHHHHHHHHHHHHHHcCCCCEEEECCHHHHHHHHH----Hc--
Confidence 999665455433222100 000 00 113456666655544444432 11
Q ss_pred eecccCceeeEEECCEEEEEEEeecccCchHHHHHhcCchHHHHHHHHHHHcCCCeEEEeccCccccCCHHHHHHHHHHH
Q 003025 282 EYQSKRGYIGLEYYGRTVGIKIMPVGIHMGQIESVLRLADKDWRVQELKQQFEGKTVLLGVDDMDIFKGVDLKLLAMEHL 361 (856)
Q Consensus 282 ~~~~~~~~~~~~~~gr~~~i~i~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~k~iil~VdRld~~KGi~~~l~A~~~l 361 (856)
+...++.++++|+|...+... +. ....++.++++|+|+.+.||+..+|+||.++
T Consensus 240 --------------~~~~~i~vvyp~vd~~~~~~~---~~---------~~~~~~~~il~vGR~~~~Kg~~llI~A~~~l 293 (463)
T PLN02949 240 --------------RIPERIKRVYPPCDTSGLQAL---PL---------ERSEDPPYIISVAQFRPEKAHALQLEAFALA 293 (463)
T ss_pred --------------CCCCCeEEEcCCCCHHHcccC---Cc---------cccCCCCEEEEEEeeeccCCHHHHHHHHHHH
Confidence 111245677889997765311 10 0113457899999999999999999999999
Q ss_pred HHhCCCCcCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCcccEEEEcCCCCHHHHHHHHHhcceeeeccc
Q 003025 362 LKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDKPVTLSERAAYYTIAECVVVTAV 441 (856)
Q Consensus 362 l~~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~~~~lv~~IN~~~~~~~~~pvv~~~~~v~~~el~aly~~ADv~vvtS~ 441 (856)
+++.++-..++.|+++|... .++..++.+++++++++.+ ....+.|.+.++.+++.++|+.||+++.||.
T Consensus 294 ~~~~~~~~~~~~LvIvG~~~---~~~~~~~~~eL~~la~~l~-------L~~~V~f~g~v~~~el~~ll~~a~~~v~~s~ 363 (463)
T PLN02949 294 LEKLDADVPRPKLQFVGSCR---NKEDEERLQKLKDRAKELG-------LDGDVEFHKNVSYRDLVRLLGGAVAGLHSMI 363 (463)
T ss_pred HHhccccCCCcEEEEEeCCC---CcccHHHHHHHHHHHHHcC-------CCCcEEEeCCCCHHHHHHHHHhCcEEEeCCc
Confidence 87544221235588888642 1222334455666665532 3345667789999999999999999999999
Q ss_pred cccCCCcccceeeeecCCCCCCCCCCCCCCCCceEEecCCccccccc-C----C--ceeeCCCCHHHHHHHHHHHHcCCH
Q 003025 442 RDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIGCSPSL-S----G--AIRVNPWNIEATAEAMHEAIQMNE 514 (856)
Q Consensus 442 ~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l-~----~--al~VnP~d~~~~A~ai~~aL~m~~ 514 (856)
.||||++++|||||+. |+|+|..+|..+.+ . + |++++ |++++|++|.+++++++
T Consensus 364 ~E~FGivvlEAMA~G~-----------------PVIa~~~gGp~~eIV~~~~~g~tG~l~~--~~~~la~ai~~ll~~~~ 424 (463)
T PLN02949 364 DEHFGISVVEYMAAGA-----------------VPIAHNSAGPKMDIVLDEDGQQTGFLAT--TVEEYADAILEVLRMRE 424 (463)
T ss_pred cCCCChHHHHHHHcCC-----------------cEEEeCCCCCcceeeecCCCCcccccCC--CHHHHHHHHHHHHhCCH
Confidence 9999999999999954 99999999975333 2 2 67764 99999999999999888
Q ss_pred HHHHHHHHHHhhhhhcCCHHHHHHHHHHHHHHHH
Q 003025 515 AEKQLRHEKHYRYVSTHDVAYWARSFFQDMERTC 548 (856)
Q Consensus 515 ~er~~r~~~~~~~v~~~~~~~W~~~~l~~l~~~~ 548 (856)
+++++..++.++.+.+++....++++.+.+....
T Consensus 425 ~~r~~m~~~ar~~~~~FS~e~~~~~~~~~i~~l~ 458 (463)
T PLN02949 425 TERLEIAAAARKRANRFSEQRFNEDFKDAIRPIL 458 (463)
T ss_pred HHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHH
Confidence 8887777888888889999998888888777643
|
|
| >cd03812 GT1_CapH_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.83 E-value=2.7e-19 Score=199.22 Aligned_cols=261 Identities=15% Similarity=0.101 Sum_probs=176.8
Q ss_pred HHHHcCCCCCEEEEeCcccchHHHHHHhhcCCCeEEEEEccCCCChHHHhcCCchHHHH-HHhHhCCEEcccCHHHHHHH
Q 003025 193 VIEVINPEDDYVWIHDYHLMVLPTFLRRRFTRLRMGFFLHSPFPSSEIYRTLPVREEIL-KALLNADLIGFHTFDYARHF 271 (856)
Q Consensus 193 i~~~~~~~~D~VwihDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~~~~lp~r~eil-~~ll~~dligf~t~~~~~~F 271 (856)
+++..+| |+|++|..+...++.++.++.....+.+..|..+...+.+........+. ..+..+|.+-..+....+.+
T Consensus 75 ~~~~~~~--Dvv~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~s~~~~~~~ 152 (358)
T cd03812 75 LIKKNKY--DIVHVHGSSASGFILLAAKKAGVKVRIAHSHNTSDSHDKKKKILKYKVLRKLINRLATDYLACSEEAGKWL 152 (358)
T ss_pred HHhcCCC--CEEEEeCcchhHHHHHHHhhCCCCeEEEEeccccccccccchhhHHHHHHHHHHhcCCEEEEcCHHHHHHH
Confidence 3445566 99999999877777777666555566777887765544332211110011 11223566555554333333
Q ss_pred HHHHHhhhCceecccCceeeEEECCEEEEEEEeecccCchHHHHHhcCchHHHHHHHHHHHc--CCCeEEEeccCccccC
Q 003025 272 LSCCSRMLGLEYQSKRGYIGLEYYGRTVGIKIMPVGIHMGQIESVLRLADKDWRVQELKQQF--EGKTVLLGVDDMDIFK 349 (856)
Q Consensus 272 l~~~~r~lg~~~~~~~~~~~~~~~gr~~~i~i~p~GId~~~~~~~~~~~~~~~~~~~l~~~~--~~k~iil~VdRld~~K 349 (856)
... ....++.++|+|+|...+... +..... .++.. .++.+|+++||+++.|
T Consensus 153 ~~~---------------------~~~~~~~vi~ngvd~~~~~~~---~~~~~~---~~~~~~~~~~~~i~~vGr~~~~K 205 (358)
T cd03812 153 FGK---------------------VKNKKFKVIPNGIDLEKFIFN---EEIRKK---RRELGILEDKFVIGHVGRFSEQK 205 (358)
T ss_pred HhC---------------------CCcccEEEEeccCcHHHcCCC---chhhhH---HHHcCCCCCCEEEEEEecccccc
Confidence 220 112356789999999877432 111111 11211 5678999999999999
Q ss_pred CHHHHHHHHHHHHHhCCCCcCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCcccEEEEcCCCCHHHHHHH
Q 003025 350 GVDLKLLAMEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDKPVTLSERAAY 429 (856)
Q Consensus 350 Gi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~~~~lv~~IN~~~~~~~~~pvv~~~~~v~~~el~al 429 (856)
|+..+++|+..+.+++|+++ |+.+|. |+..+.+++.++ +. +..+.+.+.+. .+++..+
T Consensus 206 g~~~li~a~~~l~~~~~~~~----l~ivG~-----g~~~~~~~~~~~----~~-------~~~~~v~~~g~--~~~~~~~ 263 (358)
T cd03812 206 NHEFLIEIFAELLKKNPNAK----LLLVGD-----GELEEEIKKKVK----EL-------GLEDKVIFLGV--RNDVPEL 263 (358)
T ss_pred ChHHHHHHHHHHHHhCCCeE----EEEEeC-----CchHHHHHHHHH----hc-------CCCCcEEEecc--cCCHHHH
Confidence 99999999999999998765 777773 344344444333 21 33344556665 6789999
Q ss_pred HHhcceeeeccccccCCCcccceeeeecCCCCCCCCCCCCCCCCceEEecCCcccccccCC--ceeeCCCCHHHHHHHHH
Q 003025 430 YTIAECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIGCSPSLSG--AIRVNPWNIEATAEAMH 507 (856)
Q Consensus 430 y~~ADv~vvtS~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~~--al~VnP~d~~~~A~ai~ 507 (856)
|+.||++|+||..||||++++|||+|+. |+|+|+.+|..+.+.+ +++..+.+++++|++|.
T Consensus 264 ~~~adi~v~ps~~E~~~~~~lEAma~G~-----------------PvI~s~~~~~~~~i~~~~~~~~~~~~~~~~a~~i~ 326 (358)
T cd03812 264 LQAMDVFLFPSLYEGLPLVLIEAQASGL-----------------PCILSDTITKEVDLTDLVKFLSLDESPEIWAEEIL 326 (358)
T ss_pred HHhcCEEEecccccCCCHHHHHHHHhCC-----------------CEEEEcCCchhhhhccCccEEeCCCCHHHHHHHHH
Confidence 9999999999999999999999999954 9999999999888843 55555667899999999
Q ss_pred HHHcCCHHHHHHHH
Q 003025 508 EAIQMNEAEKQLRH 521 (856)
Q Consensus 508 ~aL~m~~~er~~r~ 521 (856)
++++.++.++..+.
T Consensus 327 ~l~~~~~~~~~~~~ 340 (358)
T cd03812 327 KLKSEDRRERSSES 340 (358)
T ss_pred HHHhCcchhhhhhh
Confidence 99998776554433
|
capH in Staphylococcus aureus has been shown to be required for the biosynthesis of the type 1 capsular polysaccharide (CP1). |
| >cd03809 GT1_mtfB_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.83 E-value=2.6e-19 Score=198.62 Aligned_cols=275 Identities=20% Similarity=0.181 Sum_probs=199.8
Q ss_pred cCCCCCEEEEeCcccchHHHHHHhhcCCCeEEEEEccCCCChH--HHh---cCCchHHHHHHhHhCCEEcccCHHHHHHH
Q 003025 197 INPEDDYVWIHDYHLMVLPTFLRRRFTRLRMGFFLHSPFPSSE--IYR---TLPVREEILKALLNADLIGFHTFDYARHF 271 (856)
Q Consensus 197 ~~~~~D~VwihDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e--~~~---~lp~r~eil~~ll~~dligf~t~~~~~~F 271 (856)
.++ |+||+|.+..... +..+.++.+.+|..+|... .+. ....+.-+...+..+|.+.+.+...++.+
T Consensus 84 ~~~--Dii~~~~~~~~~~------~~~~~~~i~~~hd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~s~~~~~~~ 155 (365)
T cd03809 84 LGL--DLLHSPHNTAPLL------RLRGVPVVVTIHDLIPLRFPEYFSPGFRRYFRRLLRRALRRADAIITVSEATKRDL 155 (365)
T ss_pred cCC--CeeeecccccCcc------cCCCCCEEEEeccchhhhCcccCCHHHHHHHHHHHHHHHHHcCEEEEccHHHHHHH
Confidence 455 9999998887765 5568999999997665321 111 11223344556677899888887666665
Q ss_pred HHHHHhhhCceecccCceeeEEECCEEEEEEEeecccCchHHHHHhcCchHHHHHHHHHHHcCCCeEEEeccCccccCCH
Q 003025 272 LSCCSRMLGLEYQSKRGYIGLEYYGRTVGIKIMPVGIHMGQIESVLRLADKDWRVQELKQQFEGKTVLLGVDDMDIFKGV 351 (856)
Q Consensus 272 l~~~~r~lg~~~~~~~~~~~~~~~gr~~~i~i~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~k~iil~VdRld~~KGi 351 (856)
.+.. +. ...++.++|+|+|...+... + . .. ........++++|+++||+.+.||+
T Consensus 156 ~~~~----~~---------------~~~~~~vi~~~~~~~~~~~~---~-~-~~-~~~~~~~~~~~~i~~~G~~~~~K~~ 210 (365)
T cd03809 156 LRYL----GV---------------PPDKIVVIPLGVDPRFRPPP---A-E-AE-VLRALYLLPRPYFLYVGTIEPRKNL 210 (365)
T ss_pred HHHh----Cc---------------CHHHEEeeccccCccccCCC---c-h-HH-HHHHhcCCCCCeEEEeCCCccccCH
Confidence 5421 11 12345678999998766421 1 1 11 1112223578899999999999999
Q ss_pred HHHHHHHHHHHHhCCCCcCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCcccEEEEcCCCCHHHHHHHHH
Q 003025 352 DLKLLAMEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDKPVTLSERAAYYT 431 (856)
Q Consensus 352 ~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~~~~lv~~IN~~~~~~~~~pvv~~~~~v~~~el~aly~ 431 (856)
..+++|+..+.+++|++ .|+.+|... .........+ .+ .+..+.+.+.+.++.+++..+|+
T Consensus 211 ~~~l~~~~~~~~~~~~~----~l~i~G~~~----~~~~~~~~~~----~~-------~~~~~~v~~~g~~~~~~~~~~~~ 271 (365)
T cd03809 211 ERLLEAFARLPAKGPDP----KLVIVGKRG----WLNEELLARL----RE-------LGLGDRVRFLGYVSDEELAALYR 271 (365)
T ss_pred HHHHHHHHHHHHhcCCC----CEEEecCCc----cccHHHHHHH----HH-------cCCCCeEEECCCCChhHHHHHHh
Confidence 99999999999988754 477777432 1112222222 11 13345677889999999999999
Q ss_pred hcceeeeccccccCCCcccceeeeecCCCCCCCCCCCCCCCCceEEecCCccccccc-CCceeeCCCCHHHHHHHHHHHH
Q 003025 432 IAECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIGCSPSL-SGAIRVNPWNIEATAEAMHEAI 510 (856)
Q Consensus 432 ~ADv~vvtS~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l-~~al~VnP~d~~~~A~ai~~aL 510 (856)
.||++++||..||+|++++|||+|+. |+|+|+.+|..+.+ .+++.++|.|+++++++|.+++
T Consensus 272 ~~d~~l~ps~~e~~~~~~~Ea~a~G~-----------------pvI~~~~~~~~e~~~~~~~~~~~~~~~~~~~~i~~l~ 334 (365)
T cd03809 272 GARAFVFPSLYEGFGLPVLEAMACGT-----------------PVIASNISSLPEVAGDAALYFDPLDPEALAAAIERLL 334 (365)
T ss_pred hhhhhcccchhccCCCCHHHHhcCCC-----------------cEEecCCCCccceecCceeeeCCCCHHHHHHHHHHHh
Confidence 99999999999999999999999955 99999998888877 4689999999999999999998
Q ss_pred cCCHHHHHHHHHHHhhhhhcCCHHHHHHHHH
Q 003025 511 QMNEAEKQLRHEKHYRYVSTHDVAYWARSFF 541 (856)
Q Consensus 511 ~m~~~er~~r~~~~~~~v~~~~~~~W~~~~l 541 (856)
+ +++.+....++.++++..+++..++++++
T Consensus 335 ~-~~~~~~~~~~~~~~~~~~~sw~~~~~~~~ 364 (365)
T cd03809 335 E-DPALREELRERGLARAKRFSWEKTARRTL 364 (365)
T ss_pred c-CHHHHHHHHHHHHHHHHhCCHHHHHHHHh
Confidence 6 45666666666778888999999998775
|
mtfB (mannosyltransferase B) in E. coli has been shown to direct the growth of the O9-specific polysaccharide chain. It transfers two mannoses into the position 3 of the previously synthesized polysaccharide. |
| >cd03805 GT1_ALG2_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.83 E-value=7.9e-19 Score=198.75 Aligned_cols=280 Identities=16% Similarity=0.147 Sum_probs=184.1
Q ss_pred CCEEEEeCcccchHHHHHHhhcCCCeEEEEEccCCCChHHHhcCCchHHHHH---------HhHhCCEEcccCHHHHHHH
Q 003025 201 DDYVWIHDYHLMVLPTFLRRRFTRLRMGFFLHSPFPSSEIYRTLPVREEILK---------ALLNADLIGFHTFDYARHF 271 (856)
Q Consensus 201 ~D~VwihDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~~~~lp~r~eil~---------~ll~~dligf~t~~~~~~F 271 (856)
.|+|.+|+.... ++ +++. ..+.++.|.+| ||......--.+...+.+ .+-.+|.|-..+......+
T Consensus 95 ~Dvi~~~~~~~~-~~-~~~~-~~~~~~i~~~h--~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~ii~~s~~~~~~~ 169 (392)
T cd03805 95 YDVFIVDQVSAC-VP-LLKL-FSPSKILFYCH--FPDQLLAQRGSLLKRLYRKPFDWLEEFTTGMADKIVVNSNFTASVF 169 (392)
T ss_pred CCEEEEcCcchH-HH-HHHH-hcCCcEEEEEe--cChHHhcCCCcHHHHHHHHHHHHHHHHHhhCceEEEEcChhHHHHH
Confidence 499999886643 22 2332 22389999999 443321110011111111 1334677666554333333
Q ss_pred HHHHHhhhCceecccCceeeEEECCEEEEEEEeecccCchHHHHHhcCchHHHHHHHHHHHcCCCeEEEeccCccccCCH
Q 003025 272 LSCCSRMLGLEYQSKRGYIGLEYYGRTVGIKIMPVGIHMGQIESVLRLADKDWRVQELKQQFEGKTVLLGVDDMDIFKGV 351 (856)
Q Consensus 272 l~~~~r~lg~~~~~~~~~~~~~~~gr~~~i~i~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~k~iil~VdRld~~KGi 351 (856)
.. .++. .....+.++|+|||.+.|.+....+ ..+.....+++.+++++||+.+.||+
T Consensus 170 ~~----~~~~--------------~~~~~~~vi~n~vd~~~~~~~~~~~-----~~~~~~~~~~~~~i~~~grl~~~Kg~ 226 (392)
T cd03805 170 KK----TFPS--------------LAKNPREVVYPCVDTDSFESTSEDP-----DPGLLIPKSGKKTFLSINRFERKKNI 226 (392)
T ss_pred HH----Hhcc--------------cccCCcceeCCCcCHHHcCcccccc-----cccccccCCCceEEEEEeeecccCCh
Confidence 22 1110 0111234789999998775321110 11111122567899999999999999
Q ss_pred HHHHHHHHHHHHhC---CCCcCceEEEEEecCCCCCchhHHHHHHHHHHHHHH-HhcccCCCCcccEEEEcCCCCHHHHH
Q 003025 352 DLKLLAMEHLLKQH---PKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKR-INETFGRPGYEPVVFIDKPVTLSERA 427 (856)
Q Consensus 352 ~~~l~A~~~ll~~~---p~~~~~vvLvqi~~p~r~~~~~~~~l~~~~~~lv~~-IN~~~~~~~~~pvv~~~~~v~~~el~ 427 (856)
..+++|++++.+++ |+ +.|+.+|.... ..++..++.+++++++++ . +....+.|.|.++.+++.
T Consensus 227 ~~ll~a~~~l~~~~~~~~~----~~l~i~G~~~~-~~~~~~~~~~~l~~~~~~~~-------~l~~~V~f~g~~~~~~~~ 294 (392)
T cd03805 227 ALAIEAFAILKDKLAEFKN----VRLVIAGGYDP-RVAENVEYLEELQRLAEELL-------LLEDQVIFLPSISDSQKE 294 (392)
T ss_pred HHHHHHHHHHHhhcccccC----eEEEEEcCCCC-CCchhHHHHHHHHHHHHHhc-------CCCceEEEeCCCChHHHH
Confidence 99999999998887 55 44888885431 112223445566666554 2 233456677899999999
Q ss_pred HHHHhcceeeeccccccCCCcccceeeeecCCCCCCCCCCCCCCCCceEEecCCcccccccC---CceeeCCCCHHHHHH
Q 003025 428 AYYTIAECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIGCSPSLS---GAIRVNPWNIEATAE 504 (856)
Q Consensus 428 aly~~ADv~vvtS~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~al~VnP~d~~~~A~ 504 (856)
.+|+.||++++||..||||++++|||+|+. |+|+|+.+|..+.+. .|++++| |++++|+
T Consensus 295 ~~l~~ad~~l~~s~~E~~g~~~lEAma~G~-----------------PvI~s~~~~~~e~i~~~~~g~~~~~-~~~~~a~ 356 (392)
T cd03805 295 LLLSSARALLYTPSNEHFGIVPLEAMYAGK-----------------PVIACNSGGPLETVVDGETGFLCEP-TPEEFAE 356 (392)
T ss_pred HHHhhCeEEEECCCcCCCCchHHHHHHcCC-----------------CEEEECCCCcHHHhccCCceEEeCC-CHHHHHH
Confidence 999999999999999999999999999954 999999999888773 3788877 9999999
Q ss_pred HHHHHHcCCHHHHHHHHHHHhhhh-hcCCHHHHHHH
Q 003025 505 AMHEAIQMNEAEKQLRHEKHYRYV-STHDVAYWARS 539 (856)
Q Consensus 505 ai~~aL~m~~~er~~r~~~~~~~v-~~~~~~~W~~~ 539 (856)
+|..+++.++ +++...++.++++ ..+++..++++
T Consensus 357 ~i~~l~~~~~-~~~~~~~~a~~~~~~~~s~~~~~~~ 391 (392)
T cd03805 357 AMLKLANDPD-LADRMGAAGRKRVKEKFSTEAFAER 391 (392)
T ss_pred HHHHHHhChH-HHHHHHHHHHHHHHHhcCHHHHhhh
Confidence 9999998654 4555566667766 45777776654
|
ALG2, a 1,3-mannosyltransferase, in yeast catalyzes the mannosylation of Man(2)GlcNAc(2)-dolichol diphosphate and Man(1)GlcNAc(2)-dolichol diphosphate to form Man(3)GlcNAc(2)-dolichol diphosphate. A deficiency of this enzyme causes an abnormal accumulation of Man1GlcNAc2-PP-dolichol and Man2GlcNAc2-PP-dolichol, which is associated with a type of congenital disorders of glycosylation (CDG), designated CDG-Ii, in humans. |
| >PRK15179 Vi polysaccharide biosynthesis protein TviE; Provisional | Back alignment and domain information |
|---|
Probab=99.82 E-value=4.4e-19 Score=211.39 Aligned_cols=281 Identities=14% Similarity=0.112 Sum_probs=182.4
Q ss_pred HHHcCCCCCEEEEeCcccchHHHHHHhhcCCCeEEE-EEccCCC---ChHHHhcCCchHHHHHHhHhCCEEccc--CHHH
Q 003025 194 IEVINPEDDYVWIHDYHLMVLPTFLRRRFTRLRMGF-FLHSPFP---SSEIYRTLPVREEILKALLNADLIGFH--TFDY 267 (856)
Q Consensus 194 ~~~~~~~~D~VwihDyhl~llp~~lr~~~~~~~i~~-flH~PfP---~~e~~~~lp~r~eil~~ll~~dligf~--t~~~ 267 (856)
++..+| |+|++|.+.-.++..+..+. .++|+.+ .+|. +| .++.|+. ....+.+.+..++.+.+- +...
T Consensus 396 lk~~kp--DIVH~h~~~a~~lg~lAa~~-~gvPvIv~t~h~-~~~~~~~~~~~~--~~~~l~~~l~~~~~~i~Vs~S~~~ 469 (694)
T PRK15179 396 MRSSVP--SVVHIWQDGSIFACALAALL-AGVPRIVLSVRT-MPPVDRPDRYRV--EYDIIYSELLKMRGVALSSNSQFA 469 (694)
T ss_pred HHHcCC--cEEEEeCCcHHHHHHHHHHH-cCCCEEEEEeCC-CccccchhHHHH--HHHHHHHHHHhcCCeEEEeCcHHH
Confidence 344466 99999999877766666543 3566554 4464 22 2222210 011122333333433222 2222
Q ss_pred HHHHHHHHHhhhCceecccCceeeEEECCEEEEEEEeecccCchHHHHHhcCchHHHHHHHHHHHc-CCCeEEEeccCcc
Q 003025 268 ARHFLSCCSRMLGLEYQSKRGYIGLEYYGRTVGIKIMPVGIHMGQIESVLRLADKDWRVQELKQQF-EGKTVLLGVDDMD 346 (856)
Q Consensus 268 ~~~Fl~~~~r~lg~~~~~~~~~~~~~~~gr~~~i~i~p~GId~~~~~~~~~~~~~~~~~~~l~~~~-~~k~iil~VdRld 346 (856)
.+.+.. .+| ....+|.++|+|||...|.+ .+........++... .+.++|++|+|++
T Consensus 470 ~~~l~~----~~g---------------~~~~kI~VI~NGVd~~~f~~---~~~~~~~~~~~~~~~~~~~~vIg~VGRL~ 527 (694)
T PRK15179 470 AHRYAD----WLG---------------VDERRIPVVYNGLAPLKSVQ---DDACTAMMAQFDARTSDARFTVGTVMRVD 527 (694)
T ss_pred HHHHHH----HcC---------------CChhHEEEECCCcCHHhcCC---CchhhHHHHhhccccCCCCeEEEEEEeCC
Confidence 222222 111 12346778999999887742 121111122222222 3467899999999
Q ss_pred ccCCHHHHHHHHHHHHHhCCCCcCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCcccEEEEcCCCCHHHH
Q 003025 347 IFKGVDLKLLAMEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDKPVTLSER 426 (856)
Q Consensus 347 ~~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~~~~lv~~IN~~~~~~~~~pvv~~~~~v~~~el 426 (856)
+.||+..+++|+.++++++|+++ |+++|. |+.. +++++++++. +....+.|.|.. .++
T Consensus 528 ~~KG~~~LI~A~a~l~~~~p~~~----LvIvG~-----G~~~----~~L~~l~~~l-------gL~~~V~flG~~--~dv 585 (694)
T PRK15179 528 DNKRPFLWVEAAQRFAASHPKVR----FIMVGG-----GPLL----ESVREFAQRL-------GMGERILFTGLS--RRV 585 (694)
T ss_pred ccCCHHHHHHHHHHHHHHCcCeE----EEEEcc-----Ccch----HHHHHHHHHc-------CCCCcEEEcCCc--chH
Confidence 99999999999999999999765 888874 3333 3444455443 344567777775 479
Q ss_pred HHHHHhcceeeeccccccCCCcccceeeeecCCCCCCCCCCCCCCCCceEEecCCcccccccC---CceeeCCCCH--HH
Q 003025 427 AAYYTIAECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIGCSPSLS---GAIRVNPWNI--EA 501 (856)
Q Consensus 427 ~aly~~ADv~vvtS~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~al~VnP~d~--~~ 501 (856)
..+|+.||+||+||.+|||+++++|||+|+. |+|+|..+|+.+.+. +|++|+|.|. ++
T Consensus 586 ~~ll~aaDv~VlpS~~Egfp~vlLEAMA~G~-----------------PVVat~~gG~~EiV~dg~~GlLv~~~d~~~~~ 648 (694)
T PRK15179 586 GYWLTQFNAFLLLSRFEGLPNVLIEAQFSGV-----------------PVVTTLAGGAGEAVQEGVTGLTLPADTVTAPD 648 (694)
T ss_pred HHHHHhcCEEEeccccccchHHHHHHHHcCC-----------------eEEEECCCChHHHccCCCCEEEeCCCCCChHH
Confidence 9999999999999999999999999999955 999999999998883 3899998885 68
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHhhhh-hcCCHHHHHHHHHH
Q 003025 502 TAEAMHEAIQMNEAEKQLRHEKHYRYV-STHDVAYWARSFFQ 542 (856)
Q Consensus 502 ~A~ai~~aL~m~~~er~~r~~~~~~~v-~~~~~~~W~~~~l~ 542 (856)
++++|.+++........ ..++.++++ ..+++...++++++
T Consensus 649 La~aL~~ll~~l~~~~~-l~~~ar~~a~~~FS~~~~~~~~~~ 689 (694)
T PRK15179 649 VAEALARIHDMCAADPG-IARKAADWASARFSLNQMIASTVR 689 (694)
T ss_pred HHHHHHHHHhChhccHH-HHHHHHHHHHHhCCHHHHHHHHHH
Confidence 99999988865432222 234556666 46788777776654
|
|
| >PRK15490 Vi polysaccharide biosynthesis protein TviE; Provisional | Back alignment and domain information |
|---|
Probab=99.82 E-value=1.1e-18 Score=199.44 Aligned_cols=293 Identities=10% Similarity=0.040 Sum_probs=186.2
Q ss_pred HHHHcCCCCCEEEEeCcccchHHHHHHhhcCCCeE-EEEEccCCCChHHHhcCCchHHHHHHhHhCCEEcccCHHHHHHH
Q 003025 193 VIEVINPEDDYVWIHDYHLMVLPTFLRRRFTRLRM-GFFLHSPFPSSEIYRTLPVREEILKALLNADLIGFHTFDYARHF 271 (856)
Q Consensus 193 i~~~~~~~~D~VwihDyhl~llp~~lr~~~~~~~i-~~flH~PfP~~e~~~~lp~r~eil~~ll~~dligf~t~~~~~~F 271 (856)
++...+| |+|+.|++.-.++..+..... .+++ ....|. ++....-+.+-... +.+..++++--.+. +..+.
T Consensus 275 ~ir~~rp--DIVHt~~~~a~l~g~laA~la-gvpviv~~~h~-~~~~~~~r~~~~e~---~~~~~a~~i~~~sd-~v~~s 346 (578)
T PRK15490 275 HLCERKL--DYLSVWQDGACLMIALAALIA-GVPRIQLGLRG-LPPVVRKRLFKPEY---EPLYQALAVVPGVD-FMSNN 346 (578)
T ss_pred HHHHcCC--CEEEEcCcccHHHHHHHHHhc-CCCEEEEeecc-cCCcchhhHHHHHH---HHhhhhceeEecch-hhhcc
Confidence 4455577 899999999766655554433 4555 344565 33221111110000 12334454432222 33222
Q ss_pred HHHHHhhhCceecccCceeeEEECCEEEEEEEeecccCchHHHHHhcCchHHHHHHHHHHHc-CCCeEEEeccCccccCC
Q 003025 272 LSCCSRMLGLEYQSKRGYIGLEYYGRTVGIKIMPVGIHMGQIESVLRLADKDWRVQELKQQF-EGKTVLLGVDDMDIFKG 350 (856)
Q Consensus 272 l~~~~r~lg~~~~~~~~~~~~~~~gr~~~i~i~p~GId~~~~~~~~~~~~~~~~~~~l~~~~-~~k~iil~VdRld~~KG 350 (856)
....+.+.. .+.-...+|.++|+|||...|.+....+ ......++..+ .+..+|++|+|+.+.||
T Consensus 347 ~~v~~~l~~------------~lgip~~KI~VIyNGVD~~rf~p~~~~~--~~~r~~~~~~l~~~~~vIg~VgRl~~~Kg 412 (578)
T PRK15490 347 HCVTRHYAD------------WLKLEAKHFQVVYNGVLPPSTEPSSEVP--HKIWQQFTQKTQDADTTIGGVFRFVGDKN 412 (578)
T ss_pred HHHHHHHHH------------HhCCCHHHEEEEeCCcchhhcCccchhh--HHHHHHhhhccCCCCcEEEEEEEEehhcC
Confidence 221121110 0011234678899999998876432111 11122222223 34568999999999999
Q ss_pred HHHHHHHHHHHHHhCCCCcCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCcccEEEEcCCCCHHHHHHHH
Q 003025 351 VDLKLLAMEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDKPVTLSERAAYY 430 (856)
Q Consensus 351 i~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~~~~lv~~IN~~~~~~~~~pvv~~~~~v~~~el~aly 430 (856)
....++|+.++++++|+++ |+++| +|+..+ ++++++++. +..+.+.|.|. .+++..+|
T Consensus 413 ~~~LI~A~a~llk~~pdir----LvIVG-----dG~~~e----eLk~la~el-------gL~d~V~FlG~--~~Dv~~~L 470 (578)
T PRK15490 413 PFAWIDFAARYLQHHPATR----FVLVG-----DGDLRA----EAQKRAEQL-------GILERILFVGA--SRDVGYWL 470 (578)
T ss_pred HHHHHHHHHHHHhHCCCeE----EEEEe-----CchhHH----HHHHHHHHc-------CCCCcEEECCC--hhhHHHHH
Confidence 9999999999999998765 88777 344433 444444443 33345566665 57899999
Q ss_pred HhcceeeeccccccCCCcccceeeeecCCCCCCCCCCCCCCCCceEEecCCcccccccC---CceeeCCCCHHHHHHHHH
Q 003025 431 TIAECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIGCSPSLS---GAIRVNPWNIEATAEAMH 507 (856)
Q Consensus 431 ~~ADv~vvtS~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~al~VnP~d~~~~A~ai~ 507 (856)
+.||+||+||.+|||+++++|||+|+. |+|+|..+|+.+.+. +|++|+|.|++++++++.
T Consensus 471 aaADVfVlPS~~EGfp~vlLEAMA~Gl-----------------PVVATdvGG~~EiV~dG~nG~LVp~~D~~aLa~ai~ 533 (578)
T PRK15490 471 QKMNVFILFSRYEGLPNVLIEAQMVGV-----------------PVISTPAGGSAECFIEGVSGFILDDAQTVNLDQACR 533 (578)
T ss_pred HhCCEEEEcccccCccHHHHHHHHhCC-----------------CEEEeCCCCcHHHcccCCcEEEECCCChhhHHHHHH
Confidence 999999999999999999999999955 999999999998883 489999999999999885
Q ss_pred HHHcCCH--HHHHHHHHHHhhhhh-cCCHHHHHHHHHHHHHH
Q 003025 508 EAIQMNE--AEKQLRHEKHYRYVS-THDVAYWARSFFQDMER 546 (856)
Q Consensus 508 ~aL~m~~--~er~~r~~~~~~~v~-~~~~~~W~~~~l~~l~~ 546 (856)
.+..+.. ..+....++.++++. .+++...++.+++-+..
T Consensus 534 lA~aL~~ll~~~~~mg~~ARe~V~e~FS~e~Mv~~y~ki~~~ 575 (578)
T PRK15490 534 YAEKLVNLWRSRTGICQQTQSFLQERFTVEHMVGTFVKTIAS 575 (578)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHh
Confidence 4333221 223334456677774 58988888888776553
|
|
| >PRK10307 putative glycosyl transferase; Provisional | Back alignment and domain information |
|---|
Probab=99.81 E-value=4.5e-18 Score=194.55 Aligned_cols=282 Identities=16% Similarity=0.151 Sum_probs=192.6
Q ss_pred CEEEEeCcccchH-HHHHHhhcCCCeEEEEEccCCCChHHHhc-C--CchH----HHHH-HhHhCCEEcccCHHHHHHHH
Q 003025 202 DYVWIHDYHLMVL-PTFLRRRFTRLRMGFFLHSPFPSSEIYRT-L--PVRE----EILK-ALLNADLIGFHTFDYARHFL 272 (856)
Q Consensus 202 D~VwihDyhl~ll-p~~lr~~~~~~~i~~flH~PfP~~e~~~~-l--p~r~----eil~-~ll~~dligf~t~~~~~~Fl 272 (856)
|+|++|...+... ..++-++..++++.+.+|--||..-.-.. . +... .+.+ .+-.+|.|...+....+.+.
T Consensus 108 Div~~~~p~~~~~~~~~~~~~~~~~~~v~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~S~~~~~~~~ 187 (412)
T PRK10307 108 DRVIGVVPTLFCAPGARLLARLSGARTWLHIQDYEVDAAFGLGLLKGGKVARLATAFERSLLRRFDNVSTISRSMMNKAR 187 (412)
T ss_pred CEEEEeCCcHHHHHHHHHHHHhhCCCEEEEeccCCHHHHHHhCCccCcHHHHHHHHHHHHHHhhCCEEEecCHHHHHHHH
Confidence 9999998665432 33333444567888888866653311110 1 0000 1111 23357888777776665543
Q ss_pred HHHHhhhCceecccCceeeEEECCEEEEEEEeecccCchHHHHHhcCchHHHHHHHHHHHc---CCCeEEEeccCccccC
Q 003025 273 SCCSRMLGLEYQSKRGYIGLEYYGRTVGIKIMPVGIHMGQIESVLRLADKDWRVQELKQQF---EGKTVLLGVDDMDIFK 349 (856)
Q Consensus 273 ~~~~r~lg~~~~~~~~~~~~~~~gr~~~i~i~p~GId~~~~~~~~~~~~~~~~~~~l~~~~---~~k~iil~VdRld~~K 349 (856)
+ .+ ....++.++|+|||.+.|.+... .....+++++ .++++|+++||+.+.|
T Consensus 188 ~-----~~---------------~~~~~i~vi~ngvd~~~~~~~~~-----~~~~~~~~~~~~~~~~~~i~~~G~l~~~k 242 (412)
T PRK10307 188 E-----KG---------------VAAEKVIFFPNWSEVARFQPVAD-----ADVDALRAQLGLPDGKKIVLYSGNIGEKQ 242 (412)
T ss_pred H-----cC---------------CCcccEEEECCCcCHhhcCCCCc-----cchHHHHHHcCCCCCCEEEEEcCcccccc
Confidence 2 11 12235778999999988753211 1122355555 3568999999999999
Q ss_pred CHHHHHHHHHHHHHhCCCCcCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCcccEEEEcCCCCHHHHHHH
Q 003025 350 GVDLKLLAMEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDKPVTLSERAAY 429 (856)
Q Consensus 350 Gi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~~~~lv~~IN~~~~~~~~~pvv~~~~~v~~~el~al 429 (856)
|+..+++|++++ +++|+ +.|+++| +|+..++ +++++++. +... +.|.|.++.+++..+
T Consensus 243 g~~~li~a~~~l-~~~~~----~~l~ivG-----~g~~~~~----l~~~~~~~-------~l~~-v~f~G~~~~~~~~~~ 300 (412)
T PRK10307 243 GLELVIDAARRL-RDRPD----LIFVICG-----QGGGKAR----LEKMAQCR-------GLPN-VHFLPLQPYDRLPAL 300 (412)
T ss_pred CHHHHHHHHHHh-ccCCC----eEEEEEC-----CChhHHH----HHHHHHHc-------CCCc-eEEeCCCCHHHHHHH
Confidence 999999999876 44565 4488776 3444333 44444432 2333 456678999999999
Q ss_pred HHhcceeeeccccccCCCc----ccceeeeecCCCCCCCCCCCCCCCCceEEecCCccc--cccc-CCceeeCCCCHHHH
Q 003025 430 YTIAECVVVTAVRDGMNLT----PYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIGC--SPSL-SGAIRVNPWNIEAT 502 (856)
Q Consensus 430 y~~ADv~vvtS~~EG~nLv----~~Ea~a~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~--~~~l-~~al~VnP~d~~~~ 502 (856)
|+.||++|+||..|+++++ .+|||+|+. |+|+|..+|. .+.+ ..|++++|.|++++
T Consensus 301 ~~~aDi~v~ps~~e~~~~~~p~kl~eama~G~-----------------PVi~s~~~g~~~~~~i~~~G~~~~~~d~~~l 363 (412)
T PRK10307 301 LKMADCHLLPQKAGAADLVLPSKLTNMLASGR-----------------NVVATAEPGTELGQLVEGIGVCVEPESVEAL 363 (412)
T ss_pred HHhcCEeEEeeccCcccccCcHHHHHHHHcCC-----------------CEEEEeCCCchHHHHHhCCcEEeCCCCHHHH
Confidence 9999999999999996554 589999955 9999998774 3444 56999999999999
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHhhhhh-cCCHHHHHHHHHHHHHHHH
Q 003025 503 AEAMHEAIQMNEAEKQLRHEKHYRYVS-THDVAYWARSFFQDMERTC 548 (856)
Q Consensus 503 A~ai~~aL~m~~~er~~r~~~~~~~v~-~~~~~~W~~~~l~~l~~~~ 548 (856)
|++|.+++++ ++++....++.++++. .+++...+++|++.+++..
T Consensus 364 a~~i~~l~~~-~~~~~~~~~~a~~~~~~~fs~~~~~~~~~~~~~~~~ 409 (412)
T PRK10307 364 VAAIAALARQ-ALLRPKLGTVAREYAERTLDKENVLRQFIADIRGLV 409 (412)
T ss_pred HHHHHHHHhC-HHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHh
Confidence 9999999875 4556666777788776 5899999999988887653
|
|
| >cd03801 GT1_YqgM_like This family is most closely related to the GT1 family of glycosyltransferases and named after YqgM in Bacillus licheniformis about which little is known | Back alignment and domain information |
|---|
Probab=99.81 E-value=2.7e-18 Score=188.51 Aligned_cols=286 Identities=21% Similarity=0.154 Sum_probs=201.5
Q ss_pred HHHHcCCCCCEEEEeCcccchHHHHHHhhcCCCeEEEEEccCCCChHHHh----cCCchHHHHHHhHhCCEEcccCHHHH
Q 003025 193 VIEVINPEDDYVWIHDYHLMVLPTFLRRRFTRLRMGFFLHSPFPSSEIYR----TLPVREEILKALLNADLIGFHTFDYA 268 (856)
Q Consensus 193 i~~~~~~~~D~VwihDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~~~----~lp~r~eil~~ll~~dligf~t~~~~ 268 (856)
+++..++ |+|++|+++...+.. +..+.++.++.+.+|.+++...... ...........+..+|.+-+.+....
T Consensus 80 ~~~~~~~--Dii~~~~~~~~~~~~-~~~~~~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~s~~~~ 156 (374)
T cd03801 80 LLRRERF--DVVHAHDWLALLAAA-LAARLLGIPLVLTVHGLEFGRPGNELGLLLKLARALERRALRRADRIIAVSEATR 156 (374)
T ss_pred HhhhcCC--cEEEEechhHHHHHH-HHHHhcCCcEEEEeccchhhccccchhHHHHHHHHHHHHHHHhCCEEEEecHHHH
Confidence 4444466 999999999887776 4455678999999999887643211 00111222233456788887777666
Q ss_pred HHHHHHHHhhhCceecccCceeeEEECCEEEEEEEeecccCchHHHHHhcCchHHHHHHHHHHHcCCCeEEEeccCcccc
Q 003025 269 RHFLSCCSRMLGLEYQSKRGYIGLEYYGRTVGIKIMPVGIHMGQIESVLRLADKDWRVQELKQQFEGKTVLLGVDDMDIF 348 (856)
Q Consensus 269 ~~Fl~~~~r~lg~~~~~~~~~~~~~~~gr~~~i~i~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~k~iil~VdRld~~ 348 (856)
+.+.+. +.....++.++|+|+|...+.... ...........+++.++++||+++.
T Consensus 157 ~~~~~~-------------------~~~~~~~~~~i~~~~~~~~~~~~~------~~~~~~~~~~~~~~~i~~~g~~~~~ 211 (374)
T cd03801 157 EELREL-------------------GGVPPEKITVIPNGVDTERFRPAP------RAARRRLGIPEDEPVILFVGRLVPR 211 (374)
T ss_pred HHHHhc-------------------CCCCCCcEEEecCcccccccCccc------hHHHhhcCCcCCCeEEEEecchhhh
Confidence 555431 001113567789999987764211 0011111112457889999999999
Q ss_pred CCHHHHHHHHHHHHHhCCCCcCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCcccEEEEcCCCCHHHHHH
Q 003025 349 KGVDLKLLAMEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDKPVTLSERAA 428 (856)
Q Consensus 349 KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~~~~lv~~IN~~~~~~~~~pvv~~~~~v~~~el~a 428 (856)
||+..+++|+..+.+++|++ .|+.+|. ++....+++.+ .+. +..+.+.+.+.++.+|+..
T Consensus 212 k~~~~~i~~~~~~~~~~~~~----~l~i~G~-----~~~~~~~~~~~----~~~-------~~~~~v~~~g~~~~~~~~~ 271 (374)
T cd03801 212 KGVDLLLEALAKLRKEYPDV----RLVIVGD-----GPLREELEALA----AEL-------GLGDRVTFLGFVPDEDLPA 271 (374)
T ss_pred cCHHHHHHHHHHHhhhcCCe----EEEEEeC-----cHHHHHHHHHH----HHh-------CCCcceEEEeccChhhHHH
Confidence 99999999999998888764 4777772 33333343333 221 2334566778999999999
Q ss_pred HHHhcceeeeccccccCCCcccceeeeecCCCCCCCCCCCCCCCCceEEecCCcccccccC---CceeeCCCCHHHHHHH
Q 003025 429 YYTIAECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIGCSPSLS---GAIRVNPWNIEATAEA 505 (856)
Q Consensus 429 ly~~ADv~vvtS~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~al~VnP~d~~~~A~a 505 (856)
+|+.||++++|+..||++++++|||+|+. |+|++..+|..+.+. .|+.+++.|+++++++
T Consensus 272 ~~~~~di~i~~~~~~~~~~~~~Ea~~~g~-----------------pvI~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~ 334 (374)
T cd03801 272 LYAAADVFVLPSLYEGFGLVLLEAMAAGL-----------------PVVASDVGGIPEVVEDGETGLLVPPGDPEALAEA 334 (374)
T ss_pred HHHhcCEEEecchhccccchHHHHHHcCC-----------------cEEEeCCCChhHHhcCCcceEEeCCCCHHHHHHH
Confidence 99999999999999999999999999954 999999999888884 4899999999999999
Q ss_pred HHHHHcCCHHHHHHHHHHHh-hhhhcCCHHHHHHHHHHHH
Q 003025 506 MHEAIQMNEAEKQLRHEKHY-RYVSTHDVAYWARSFFQDM 544 (856)
Q Consensus 506 i~~aL~m~~~er~~r~~~~~-~~v~~~~~~~W~~~~l~~l 544 (856)
|.++++.+.. +....++.+ ...+.+++..+++.+.+-+
T Consensus 335 i~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 373 (374)
T cd03801 335 ILRLLDDPEL-RRRLGEAARERVAERFSWDRVAARTEEVY 373 (374)
T ss_pred HHHHHcChHH-HHHHHHHHHHHHHHhcCHHHHHHHHHHhh
Confidence 9999986544 334444444 5567789999998877643
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. |
| >cd04946 GT1_AmsK_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.81 E-value=3.4e-18 Score=195.27 Aligned_cols=272 Identities=15% Similarity=0.105 Sum_probs=189.9
Q ss_pred CCCCCEEEEeCcccchH-HHHHHhhcCCCeEEEEEccCC--CChHHHhcCCchHHHHHHhHhCCEEcccCHHHHHHHHHH
Q 003025 198 NPEDDYVWIHDYHLMVL-PTFLRRRFTRLRMGFFLHSPF--PSSEIYRTLPVREEILKALLNADLIGFHTFDYARHFLSC 274 (856)
Q Consensus 198 ~~~~D~VwihDyhl~ll-p~~lr~~~~~~~i~~flH~Pf--P~~e~~~~lp~r~eil~~ll~~dligf~t~~~~~~Fl~~ 274 (856)
+++.|+++.|-+|-... -.+++++....++....|-.- +.......++.++.+ +-.+|.|.+.+....+.+.+.
T Consensus 125 ~~~~~v~~sy~~~~~~~~~~~l~~~~~~~~~i~~~Hg~d~~~~~~~~~~~~~~~~~---~~~~d~ii~~S~~~~~~l~~~ 201 (407)
T cd04946 125 DGQGTVFYSYWLHETAYALALLKKEYLRKRVISRAHGYDLYEDRYPSGYIPLRRYL---LSSLDAVFPCSEQGRNYLQKR 201 (407)
T ss_pred ccCceEEEEecCchHHHHHHHHHHhcCCceEEEEeccchhhhhhccccchHHHHHH---HhcCCEEEECCHHHHHHHHHH
Confidence 44457777766554433 345667666667888899421 111111112222322 346899988887665544331
Q ss_pred HHhhhCceecccCceeeEEECCEEEEEEEeecccCchHHHHHhcCchHHHHHHHHHHHcCCCeEEEeccCccccCCHHHH
Q 003025 275 CSRMLGLEYQSKRGYIGLEYYGRTVGIKIMPVGIHMGQIESVLRLADKDWRVQELKQQFEGKTVLLGVDDMDIFKGVDLK 354 (856)
Q Consensus 275 ~~r~lg~~~~~~~~~~~~~~~gr~~~i~i~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~k~iil~VdRld~~KGi~~~ 354 (856)
.+ ....++.++|+|++...+... ....++..|+++||+.+.||+..+
T Consensus 202 ----~~---------------~~~~ki~vi~~gv~~~~~~~~--------------~~~~~~~~il~~Grl~~~Kg~~~l 248 (407)
T cd04946 202 ----YP---------------AYKEKIKVSYLGVSDPGIISK--------------PSKDDTLRIVSCSYLVPVKRVDLI 248 (407)
T ss_pred ----CC---------------CccccEEEEECCcccccccCC--------------CCCCCCEEEEEeeccccccCHHHH
Confidence 11 122355778999997655311 011456789999999999999999
Q ss_pred HHHHHHHHHhCCCCcCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCcccEEEEcCCCCHHHHHHHHHh--
Q 003025 355 LLAMEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDKPVTLSERAAYYTI-- 432 (856)
Q Consensus 355 l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~~~~lv~~IN~~~~~~~~~pvv~~~~~v~~~el~aly~~-- 432 (856)
++|+.++.+++|+.. +.++.+|. |++.++++ +++++. +..+.+.+.|.++.+|+.++|+.
T Consensus 249 i~a~~~l~~~~p~~~--l~~~iiG~-----g~~~~~l~----~~~~~~-------~~~~~V~f~G~v~~~e~~~~~~~~~ 310 (407)
T cd04946 249 IKALAALAKARPSIK--IKWTHIGG-----GPLEDTLK----ELAESK-------PENISVNFTGELSNSEVYKLYKENP 310 (407)
T ss_pred HHHHHHHHHhCCCce--EEEEEEeC-----chHHHHHH----HHHHhc-------CCCceEEEecCCChHHHHHHHhhcC
Confidence 999999999998764 66776763 34433443 333321 22345668899999999999986
Q ss_pred cceeeeccccccCCCcccceeeeecCCCCCCCCCCCCCCCCceEEecCCcccccccCC---ceeeCC-CCHHHHHHHHHH
Q 003025 433 AECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIGCSPSLSG---AIRVNP-WNIEATAEAMHE 508 (856)
Q Consensus 433 ADv~vvtS~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~~---al~VnP-~d~~~~A~ai~~ 508 (856)
||+|+.||..|||+++++|||+|+. |+|+|..+|..+.+.+ |++++| .|++++|++|.+
T Consensus 311 ~~v~v~~S~~Eg~p~~llEAma~G~-----------------PVIas~vgg~~e~i~~~~~G~l~~~~~~~~~la~~I~~ 373 (407)
T cd04946 311 VDVFVNLSESEGLPVSIMEAMSFGI-----------------PVIATNVGGTPEIVDNGGNGLLLSKDPTPNELVSSLSK 373 (407)
T ss_pred CCEEEeCCccccccHHHHHHHHcCC-----------------CEEeCCCCCcHHHhcCCCcEEEeCCCCCHHHHHHHHHH
Confidence 7889999999999999999999955 9999999999988843 688876 489999999999
Q ss_pred HHcCCHHHHHHHHHHHhhhhh-cCCHHHHHHHHH
Q 003025 509 AIQMNEAEKQLRHEKHYRYVS-THDVAYWARSFF 541 (856)
Q Consensus 509 aL~m~~~er~~r~~~~~~~v~-~~~~~~W~~~~l 541 (856)
+++ +++++....++.++++. .+++..+.++|+
T Consensus 374 ll~-~~~~~~~m~~~ar~~~~~~f~~~~~~~~~~ 406 (407)
T cd04946 374 FID-NEEEYQTMREKAREKWEENFNASKNYREFA 406 (407)
T ss_pred HHh-CHHHHHHHHHHHHHHHHHHcCHHHhHHHhc
Confidence 998 55666666777777774 578888877765
|
AmsK is involved in the biosynthesis of amylovoran, which functions as a virulence factor. It functions as a glycosyl transferase which transfers galactose from UDP-galactose to a lipid-linked amylovoran-subunit precursor. The members of this family are found mainly in bacteria and Archaea. |
| >cd03799 GT1_amsK_like This is a family of GT1 glycosyltransferases found specifically in certain bacteria | Back alignment and domain information |
|---|
Probab=99.81 E-value=3.1e-18 Score=190.16 Aligned_cols=268 Identities=17% Similarity=0.156 Sum_probs=191.3
Q ss_pred HHcCCCCCEEEEeCcccchHHHHHHhhcCCCeEEEEEccCCCChHHHhcCCchHHHHHHhHhCCEEcccCHHHHHHHHHH
Q 003025 195 EVINPEDDYVWIHDYHLMVLPTFLRRRFTRLRMGFFLHSPFPSSEIYRTLPVREEILKALLNADLIGFHTFDYARHFLSC 274 (856)
Q Consensus 195 ~~~~~~~D~VwihDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~~~~lp~r~eil~~ll~~dligf~t~~~~~~Fl~~ 274 (856)
+..++ |+|++|..+...+..++..+....++.+.+|.+-..... ....+.+.+-.+|.+-..+....+.+.+.
T Consensus 76 ~~~~~--Dii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~vi~~s~~~~~~l~~~ 148 (355)
T cd03799 76 RRLGI--DHIHAHFGTTPATVAMLASRLGGIPYSFTAHGKDIFRSP-----DAIDLDEKLARADFVVAISEYNRQQLIRL 148 (355)
T ss_pred HhcCC--CEEEECCCCchHHHHHHHHHhcCCCEEEEEecccccccC-----chHHHHHHHhhCCEEEECCHHHHHHHHHh
Confidence 34455 999999876666666666666678999999854221111 11233444557999988888766665541
Q ss_pred HHhhhCceecccCceeeEEECCEEEEEEEeecccCchHHHHHhcCchHHHHHHHHHHHcCCCeEEEeccCccccCCHHHH
Q 003025 275 CSRMLGLEYQSKRGYIGLEYYGRTVGIKIMPVGIHMGQIESVLRLADKDWRVQELKQQFEGKTVLLGVDDMDIFKGVDLK 354 (856)
Q Consensus 275 ~~r~lg~~~~~~~~~~~~~~~gr~~~i~i~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~k~iil~VdRld~~KGi~~~ 354 (856)
.+ ....++.++|+|+|...+.... .....++..|+++||+.+.||+..+
T Consensus 149 ----~~---------------~~~~~~~vi~~~~d~~~~~~~~------------~~~~~~~~~i~~~g~~~~~k~~~~l 197 (355)
T cd03799 149 ----LG---------------CDPDKIHVVHCGVDLERFPPRP------------PPPPGEPLRILSVGRLVEKKGLDYL 197 (355)
T ss_pred ----cC---------------CCcccEEEEeCCcCHHHcCCcc------------ccccCCCeEEEEEeeeccccCHHHH
Confidence 01 1224577899999988764211 1122456789999999999999999
Q ss_pred HHHHHHHHHhCCCCcCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCcccEEEEcCCCCHHHHHHHHHhcc
Q 003025 355 LLAMEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDKPVTLSERAAYYTIAE 434 (856)
Q Consensus 355 l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~~~~lv~~IN~~~~~~~~~pvv~~~~~v~~~el~aly~~AD 434 (856)
++|++++.+++|++ .|+.+|. ++...++ .+.+.+. +..+.+.+.+.++.+|+.++|+.||
T Consensus 198 ~~~~~~l~~~~~~~----~l~i~G~-----~~~~~~~----~~~~~~~-------~~~~~v~~~g~~~~~~l~~~~~~ad 257 (355)
T cd03799 198 LEALALLKDRGIDF----RLDIVGD-----GPLRDEL----EALIAEL-------GLEDRVTLLGAKSQEEVRELLRAAD 257 (355)
T ss_pred HHHHHHHhhcCCCe----EEEEEEC-----CccHHHH----HHHHHHc-------CCCCeEEECCcCChHHHHHHHHhCC
Confidence 99999998876654 4777774 2232333 3333332 3345677889999999999999999
Q ss_pred eeeecccc------ccCCCcccceeeeecCCCCCCCCCCCCCCCCceEEecCCcccccccC---CceeeCCCCHHHHHHH
Q 003025 435 CVVVTAVR------DGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIGCSPSLS---GAIRVNPWNIEATAEA 505 (856)
Q Consensus 435 v~vvtS~~------EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~al~VnP~d~~~~A~a 505 (856)
++++||.. ||||++.+|||+|+. |+|+|+.+|..+.+. .|++++|.|+++++++
T Consensus 258 i~l~~s~~~~~~~~e~~~~~~~Ea~a~G~-----------------Pvi~~~~~~~~~~i~~~~~g~~~~~~~~~~l~~~ 320 (355)
T cd03799 258 LFVLPSVTAADGDREGLPVVLMEAMAMGL-----------------PVISTDVSGIPELVEDGETGLLVPPGDPEALADA 320 (355)
T ss_pred EEEecceecCCCCccCccHHHHHHHHcCC-----------------CEEecCCCCcchhhhCCCceEEeCCCCHHHHHHH
Confidence 99999999 999999999999955 999999988777773 4899999999999999
Q ss_pred HHHHHcCCHHHHHHHHHHHhhhhh-cCCHHHHHH
Q 003025 506 MHEAIQMNEAEKQLRHEKHYRYVS-THDVAYWAR 538 (856)
Q Consensus 506 i~~aL~m~~~er~~r~~~~~~~v~-~~~~~~W~~ 538 (856)
|.++++.+.. +....+..++++. .+++...++
T Consensus 321 i~~~~~~~~~-~~~~~~~a~~~~~~~~s~~~~~~ 353 (355)
T cd03799 321 IERLLDDPEL-RREMGEAGRARVEEEFDIRKQAA 353 (355)
T ss_pred HHHHHhCHHH-HHHHHHHHHHHHHHhcCHHHHhh
Confidence 9999986543 4445555666664 466665544
|
amsK in Erwinia amylovora, has been reported to be involved in the biosynthesis of amylovoran, a exopolysaccharide acting as a virulence factor. |
| >TIGR02918 accessory Sec system glycosylation protein GtfA | Back alignment and domain information |
|---|
Probab=99.81 E-value=3.5e-18 Score=198.77 Aligned_cols=272 Identities=14% Similarity=0.086 Sum_probs=181.0
Q ss_pred CCCEEEEeCcccchHHHHHHhhcCCCeEEEEEccCCCChH-HHh----cCCchHHHHHHhHhCCEEcccCHHHHHHHHHH
Q 003025 200 EDDYVWIHDYHLMVLPTFLRRRFTRLRMGFFLHSPFPSSE-IYR----TLPVREEILKALLNADLIGFHTFDYARHFLSC 274 (856)
Q Consensus 200 ~~D~VwihDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e-~~~----~lp~r~eil~~ll~~dligf~t~~~~~~Fl~~ 274 (856)
+.|+|.++--.... +.++ +..+.+++..++|.-.=+.. .-. .-+.-+..++.+-.+|.|-..|....+.....
T Consensus 211 ~~di~i~dr~~~~~-~~~~-~~~~~~~~v~~lH~~h~~~~~~~~~~~~~~~~y~~~~~~~~~~D~iI~~S~~~~~~l~~~ 288 (500)
T TIGR02918 211 KKDIIILDRSTGIG-QAVL-ENKGPAKLGVVVHAEHFSESATNETYILWNNYYEYQFSNADYIDFFITATDIQNQILKNQ 288 (500)
T ss_pred CCCEEEEcCCcccc-hHHH-hcCCCceEEEEEChhhhcCccCcchhHHHHHHHHHHHhchhhCCEEEECCHHHHHHHHHH
Confidence 34888886555433 3444 56678999999995431100 000 00111222333344677766665433333221
Q ss_pred HHhhhCceecccCceeeEEECCEEEEEEEeecccCchHHHHHhcCchHHHHHHHHHHHcCCCeEEEeccCccccCCHHHH
Q 003025 275 CSRMLGLEYQSKRGYIGLEYYGRTVGIKIMPVGIHMGQIESVLRLADKDWRVQELKQQFEGKTVLLGVDDMDIFKGVDLK 354 (856)
Q Consensus 275 ~~r~lg~~~~~~~~~~~~~~~gr~~~i~i~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~k~iil~VdRld~~KGi~~~ 354 (856)
... +.+...+|.++|+|++...+. +. ....+..|++|||+.+.||+..+
T Consensus 289 ~~~----------------~~~~~~ki~viP~g~~~~~~~-----~~----------~~r~~~~il~vGrl~~~Kg~~~l 337 (500)
T TIGR02918 289 FKK----------------YYNIEPRIYTIPVGSLDELQY-----PE----------QERKPFSIITASRLAKEKHIDWL 337 (500)
T ss_pred hhh----------------hcCCCCcEEEEcCCCcccccC-----cc----------cccCCeEEEEEeccccccCHHHH
Confidence 111 112234567889998754321 10 01234689999999999999999
Q ss_pred HHHHHHHHHhCCCCcCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCcccEEEEcCCCCHHHHHHHHHhcc
Q 003025 355 LLAMEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDKPVTLSERAAYYTIAE 434 (856)
Q Consensus 355 l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~~~~lv~~IN~~~~~~~~~pvv~~~~~v~~~el~aly~~AD 434 (856)
++|+.++.+++|+++ |+++|. |++. +++++++++.+ ....+.+.|.. ++..+|+.||
T Consensus 338 i~A~~~l~~~~p~~~----l~i~G~-----G~~~----~~l~~~i~~~~-------l~~~V~f~G~~---~~~~~~~~ad 394 (500)
T TIGR02918 338 VKAVVKAKKSVPELT----FDIYGE-----GGEK----QKLQKIINENQ-------AQDYIHLKGHR---NLSEVYKDYE 394 (500)
T ss_pred HHHHHHHHhhCCCeE----EEEEEC-----chhH----HHHHHHHHHcC-------CCCeEEEcCCC---CHHHHHHhCC
Confidence 999999999999765 777763 4443 34555554432 23355667754 5778999999
Q ss_pred eeeeccccccCCCcccceeeeecCCCCCCCCCCCCCCCCceEEecCCc-ccccccC---CceeeCC----CC----HHHH
Q 003025 435 CVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFI-GCSPSLS---GAIRVNP----WN----IEAT 502 (856)
Q Consensus 435 v~vvtS~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~g~lV~Se~~-G~~~~l~---~al~VnP----~d----~~~~ 502 (856)
++|+||.+||||++++|||||+. |+|+|... |..+.+. +|++|++ .| ++++
T Consensus 395 v~v~pS~~Egfgl~~lEAma~G~-----------------PVI~~dv~~G~~eiI~~g~nG~lv~~~~~~~d~~~~~~~l 457 (500)
T TIGR02918 395 LYLSASTSEGFGLTLMEAVGSGL-----------------GMIGFDVNYGNPTFIEDNKNGYLIPIDEEEDDEDQIITAL 457 (500)
T ss_pred EEEEcCccccccHHHHHHHHhCC-----------------CEEEecCCCCCHHHccCCCCEEEEeCCccccchhHHHHHH
Confidence 99999999999999999999954 99999986 6777773 4899974 34 8999
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHhhhhhcCCHHHHHHHHHHHHHH
Q 003025 503 AEAMHEAIQMNEAEKQLRHEKHYRYVSTHDVAYWARSFFQDMER 546 (856)
Q Consensus 503 A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~l~~ 546 (856)
|++|.++|+ +.+++...++.++....+++..-++++.+-+++
T Consensus 458 a~~I~~ll~--~~~~~~~~~~a~~~a~~fs~~~v~~~w~~ll~~ 499 (500)
T TIGR02918 458 AEKIVEYFN--SNDIDAFHEYSYQIAEGFLTANIIEKWKKLVRE 499 (500)
T ss_pred HHHHHHHhC--hHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhh
Confidence 999999994 445666677788888888888888877765543
|
Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus. Members are associated with glycosylation of serine-rich glycoproteins exported by the accessory Sec system. |
| >cd03822 GT1_ecORF704_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.81 E-value=2.1e-18 Score=191.42 Aligned_cols=283 Identities=19% Similarity=0.183 Sum_probs=190.3
Q ss_pred HHHcCCCCCEEEEeCcc-cc---hHHHHH-HhhcCCCeEEEEEccCCCChHHHhcCCchHHHHHHhHhCCEEcccCHHHH
Q 003025 194 IEVINPEDDYVWIHDYH-LM---VLPTFL-RRRFTRLRMGFFLHSPFPSSEIYRTLPVREEILKALLNADLIGFHTFDYA 268 (856)
Q Consensus 194 ~~~~~~~~D~VwihDyh-l~---llp~~l-r~~~~~~~i~~flH~PfP~~e~~~~lp~r~eil~~ll~~dligf~t~~~~ 268 (856)
+...+| |+|++|+.+ ++ ...... ..+..+.++.+.+|.+.|....+.. ..-.-..+-.+|.|-+.+.+.+
T Consensus 72 ~~~~~~--dii~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~~~~---~~~~~~~~~~~d~ii~~s~~~~ 146 (366)
T cd03822 72 IRLSGP--DVVVIQHEYGIFGGEAGLYLLLLLRGLGIPVVVTLHTVLLHEPRPGD---RALLRLLLRRADAVIVMSSELL 146 (366)
T ss_pred HhhcCC--CEEEEeeccccccchhhHHHHHHHhhcCCCEEEEEecCCccccchhh---hHHHHHHHhcCCEEEEeeHHHH
Confidence 344455 899998733 21 111111 1123689999999986232211110 1111222346888888865555
Q ss_pred HHHHHHHHhhhCceecccCceeeEEECCEEEEEEEeecccCchHHHHHhcCchHHHHHHHHHHHcCCCeEEEeccCcccc
Q 003025 269 RHFLSCCSRMLGLEYQSKRGYIGLEYYGRTVGIKIMPVGIHMGQIESVLRLADKDWRVQELKQQFEGKTVLLGVDDMDIF 348 (856)
Q Consensus 269 ~~Fl~~~~r~lg~~~~~~~~~~~~~~~gr~~~i~i~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~k~iil~VdRld~~ 348 (856)
++++... ...++.++|+|++...+.... . . +......++.+|+++||+.+.
T Consensus 147 ~~~~~~~---------------------~~~~~~~i~~~~~~~~~~~~~------~-~-~~~~~~~~~~~i~~~G~~~~~ 197 (366)
T cd03822 147 RALLLRA---------------------YPEKIAVIPHGVPDPPAEPPE------S-L-KALGGLDGRPVLLTFGLLRPY 197 (366)
T ss_pred HHHHhhc---------------------CCCcEEEeCCCCcCcccCCch------h-h-HhhcCCCCCeEEEEEeeccCC
Confidence 5554310 023567789999976653211 1 1 111122567899999999999
Q ss_pred CCHHHHHHHHHHHHHhCCCCcCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCcccEEEEc-CCCCHHHHH
Q 003025 349 KGVDLKLLAMEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFID-KPVTLSERA 427 (856)
Q Consensus 349 KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~~~~lv~~IN~~~~~~~~~pvv~~~-~~v~~~el~ 427 (856)
||+..+++|++.+.+++|+++ |+.+|... +.......+..+++.+. +..+.+.+. +.++.+++.
T Consensus 198 K~~~~ll~a~~~~~~~~~~~~----l~i~G~~~----~~~~~~~~~~~~~i~~~-------~~~~~v~~~~~~~~~~~~~ 262 (366)
T cd03822 198 KGLELLLEALPLLVAKHPDVR----LLVAGETH----PDLERYRGEAYALAERL-------GLADRVIFINRYLPDEELP 262 (366)
T ss_pred CCHHHHHHHHHHHHhhCCCeE----EEEeccCc----cchhhhhhhhHhHHHhc-------CCCCcEEEecCcCCHHHHH
Confidence 999999999999999888654 88777432 11111111111222232 233344444 449999999
Q ss_pred HHHHhcceeeeccccc--cCCCcccceeeeecCCCCCCCCCCCCCCCCceEEecCCccccccc---CCceeeCCCCHHHH
Q 003025 428 AYYTIAECVVVTAVRD--GMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIGCSPSL---SGAIRVNPWNIEAT 502 (856)
Q Consensus 428 aly~~ADv~vvtS~~E--G~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l---~~al~VnP~d~~~~ 502 (856)
.+|+.||++++||..| |++++++|||+|+. |+|+|+.+| .+.+ ..|+++++.|++++
T Consensus 263 ~~~~~ad~~v~ps~~e~~~~~~~~~Ea~a~G~-----------------PvI~~~~~~-~~~i~~~~~g~~~~~~d~~~~ 324 (366)
T cd03822 263 ELFSAADVVVLPYRSADQTQSGVLAYAIGFGK-----------------PVISTPVGH-AEEVLDGGTGLLVPPGDPAAL 324 (366)
T ss_pred HHHhhcCEEEecccccccccchHHHHHHHcCC-----------------CEEecCCCC-hheeeeCCCcEEEcCCCHHHH
Confidence 9999999999999999 99999999999955 999999988 6666 34899999999999
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHhhhhhcCCHHHHHHHHHHHH
Q 003025 503 AEAMHEAIQMNEAEKQLRHEKHYRYVSTHDVAYWARSFFQDM 544 (856)
Q Consensus 503 A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~l 544 (856)
|++|.++++.+ .++....++.++++.++++..+++++.+.+
T Consensus 325 ~~~l~~l~~~~-~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~ 365 (366)
T cd03822 325 AEAIRRLLADP-ELAQALRARAREYARAMSWERVAERYLRLL 365 (366)
T ss_pred HHHHHHHHcCh-HHHHHHHHHHHHHHhhCCHHHHHHHHHHHh
Confidence 99999999854 445556677788888899999999887644
|
ORF704 in E. coli has been shown to be involved in the biosynthesis of O-specific mannose homopolysaccharides. |
| >cd03821 GT1_Bme6_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.81 E-value=2.8e-18 Score=189.88 Aligned_cols=273 Identities=17% Similarity=0.241 Sum_probs=182.2
Q ss_pred CEEEEeCcc-cchHHHHHHhhcCCCeEEEEEccCCCChHHHhcCCchHHH------HHHhHhCCEEcccCHHHHHHHHHH
Q 003025 202 DYVWIHDYH-LMVLPTFLRRRFTRLRMGFFLHSPFPSSEIYRTLPVREEI------LKALLNADLIGFHTFDYARHFLSC 274 (856)
Q Consensus 202 D~VwihDyh-l~llp~~lr~~~~~~~i~~flH~PfP~~e~~~~lp~r~ei------l~~ll~~dligf~t~~~~~~Fl~~ 274 (856)
|+|++|+.. ....+.....+..+.++.+..|-.++...... -+.+..+ -..+-.+|.+.+.+.........
T Consensus 89 dii~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~s~~~~~~~~~- 166 (375)
T cd03821 89 DIVHVHGLWSYPSLAAARAARKYGIPYVVSPHGMLDPWALPH-KALKKRLAWFLFERRLLQAAAAVHATSEQEAAEIRR- 166 (375)
T ss_pred CEEEEecccchHHHHHHHHHHHhCCCEEEEcccccccccccc-chhhhHHHHHHHHHHHHhcCCEEEECCHHHHHHHHh-
Confidence 999999843 33333322223357889999997665433100 0011100 11123456665555333222211
Q ss_pred HHhhhCceecccCceeeEEECCEEEEEEEeecccCchHHHHHhcCchHHHHHHHHHHHc---CCCeEEEeccCccccCCH
Q 003025 275 CSRMLGLEYQSKRGYIGLEYYGRTVGIKIMPVGIHMGQIESVLRLADKDWRVQELKQQF---EGKTVLLGVDDMDIFKGV 351 (856)
Q Consensus 275 ~~r~lg~~~~~~~~~~~~~~~gr~~~i~i~p~GId~~~~~~~~~~~~~~~~~~~l~~~~---~~k~iil~VdRld~~KGi 351 (856)
.+...++.++|+|+|.+.+.... .... ++.+ .++++++++||+++.||+
T Consensus 167 --------------------~~~~~~~~vi~~~~~~~~~~~~~---~~~~-----~~~~~~~~~~~~i~~~G~~~~~K~~ 218 (375)
T cd03821 167 --------------------LGLKAPIAVIPNGVDIPPFAALP---SRGR-----RRKFPILPDKRIILFLGRLHPKKGL 218 (375)
T ss_pred --------------------hCCcccEEEcCCCcChhccCcch---hhhh-----hhhccCCCCCcEEEEEeCcchhcCH
Confidence 11234577899999988775321 1110 2222 467899999999999999
Q ss_pred HHHHHHHHHHHHhCCCCcCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCcccEEEEcCCCCHHHHHHHHH
Q 003025 352 DLKLLAMEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDKPVTLSERAAYYT 431 (856)
Q Consensus 352 ~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~~~~lv~~IN~~~~~~~~~pvv~~~~~v~~~el~aly~ 431 (856)
..+++|+.++.+++|+++ |+.+|... +. + ...++.++.+. +..+.+.+.|.++.+++..+|+
T Consensus 219 ~~li~a~~~l~~~~~~~~----l~i~G~~~---~~-~---~~~~~~~~~~~-------~~~~~v~~~g~~~~~~~~~~~~ 280 (375)
T cd03821 219 DLLIEAFAKLAERFPDWH----LVIAGPDE---GG-Y---RAELKQIAAAL-------GLEDRVTFTGMLYGEDKAAALA 280 (375)
T ss_pred HHHHHHHHHhhhhcCCeE----EEEECCCC---cc-h---HHHHHHHHHhc-------CccceEEEcCCCChHHHHHHHh
Confidence 999999999999888765 77777422 11 1 12222222222 3345667889999999999999
Q ss_pred hcceeeeccccccCCCcccceeeeecCCCCCCCCCCCCCCCCceEEecCCcccccccC-C-ceeeCCCCHHHHHHHHHHH
Q 003025 432 IAECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIGCSPSLS-G-AIRVNPWNIEATAEAMHEA 509 (856)
Q Consensus 432 ~ADv~vvtS~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~-~-al~VnP~d~~~~A~ai~~a 509 (856)
.||++++||..||||++++|||+|+. |+|+|+.+|..+.+. + ++++ |.+.++++++|.++
T Consensus 281 ~adv~v~ps~~e~~~~~~~Eama~G~-----------------PvI~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~i~~l 342 (375)
T cd03821 281 DADLFVLPSHSENFGIVVAEALACGT-----------------PVVTTDKVPWQELIEYGCGWVV-DDDVDALAAALRRA 342 (375)
T ss_pred hCCEEEeccccCCCCcHHHHHHhcCC-----------------CEEEcCCCCHHHHhhcCceEEe-CCChHHHHHHHHHH
Confidence 99999999999999999999999955 999999999888884 3 5555 45669999999999
Q ss_pred HcCCHHHHHHHHHHHhhh-hhcCCHHHHHHHHH
Q 003025 510 IQMNEAEKQLRHEKHYRY-VSTHDVAYWARSFF 541 (856)
Q Consensus 510 L~m~~~er~~r~~~~~~~-v~~~~~~~W~~~~l 541 (856)
++++ +++....++.+++ ...+++...++.++
T Consensus 343 ~~~~-~~~~~~~~~~~~~~~~~~s~~~~~~~~~ 374 (375)
T cd03821 343 LELP-QRLKAMGENGRALVEERFSWTAIAQQLL 374 (375)
T ss_pred HhCH-HHHHHHHHHHHHHHHHhcCHHHHHHHhh
Confidence 9876 5566666666777 56678777777664
|
Bme6 in Brucella melitensis has been shown to be involved in the biosynthesis of a polysaccharide. |
| >PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.81 E-value=7.6e-19 Score=203.46 Aligned_cols=197 Identities=13% Similarity=0.105 Sum_probs=129.4
Q ss_pred CCcEEEEEecCCCCCCCCCCCCCCCHHHHHHHHHHHhhCCCeEEEecCCChhhHHHhhcCCC-CccEEeeCCEEEEeCCC
Q 003025 589 SKSRAILFDYDGTVMPQTSINKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSPCK-KLGIAAEHGYFMRWSAD 667 (856)
Q Consensus 589 s~~rlI~~DlDGTLl~~~~~~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~~~-~lgliaenG~~I~~~~~ 667 (856)
.++|+|++|+||||++ .+..++++++++|++| +++|+.|++||||+...+..++..+. ..++|++||+.|+.+++
T Consensus 414 ~~~KLIfsDLDGTLLd---~d~~i~~~t~eAL~~L-~ekGI~~VIATGRs~~~i~~l~~~Lgl~~~~I~eNGA~I~~~~~ 489 (694)
T PRK14502 414 QFKKIVYTDLDGTLLN---PLTYSYSTALDALRLL-KDKELPLVFCSAKTMGEQDLYRNELGIKDPFITENGGAIFIPKD 489 (694)
T ss_pred ceeeEEEEECcCCCcC---CCCccCHHHHHHHHHH-HHcCCeEEEEeCCCHHHHHHHHHHcCCCCeEEEcCCCEEEECCC
Confidence 4579999999999999 6677888999999997 88899999999999999998887664 34699999999998654
Q ss_pred c------------ceEecCCCCcccHHHHHHHHHHHHhhcC----------CcceEEecccceEEe----e---------
Q 003025 668 E------------EWQNCGQSVDFGWIQIAEPVMKLYTEST----------DGSYIEIKESALVWH----H--------- 712 (856)
Q Consensus 668 ~------------~w~~~~~~~~~~w~~~v~~i~~~~~~~~----------~Gs~ie~k~~~l~~~----~--------- 712 (856)
. .+.......+ .+.+.++++...+.. ...++.... ...+. +
T Consensus 490 ~~~~~~~~~~~~~~~iI~~~~l~---~e~i~~IL~~lke~l~~~i~ihv~~~~~~i~~~~-d~~~~ei~~~TgL~~~~a~ 565 (694)
T PRK14502 490 YFRLPFAYDRVAGNYLVIELGMA---YKDIRHILKKALAEACTEIENSEKAGNIFITSFG-DMSVEDVSRLTDLNLKQAE 565 (694)
T ss_pred cccccccccccCCCeEEEEcCCC---HHHHHHHHHHHHHhhcceeeeeeccCcEEEecCC-cccHHHHHHhhCCCHHHHH
Confidence 1 0000000111 122333333222211 011111100 00000 0
Q ss_pred ----ecCCCCCCchhHHHHHHHHHHHhcCCCeEEEEcCeEEEEEeCCCCHHHHHHHHHHHhhhcCCCcceEEEE--eCCc
Q 003025 713 ----RDADPGFGSSQAKELLDHLESVLANEPAAVKSGQFIVEVKPQGVSKGVVAEKIFTTMAESGRHADFVLCI--GDDR 786 (856)
Q Consensus 713 ----~~~dp~~~~~~a~el~~~L~~~l~~~~~~v~~g~~~vEI~p~gvsKG~al~~Ll~~l~~~gi~~d~vlai--GD~~ 786 (856)
+.....+......+.++.+.+.+......+..++.++||. .++|||.|+++|++.+ +++.+++++| ||+.
T Consensus 566 ~a~~Re~seKIl~~gd~e~Leel~~~L~~~~l~v~~g~rfleI~-~gvdKG~AL~~L~e~~---gI~~~eViafalGDs~ 641 (694)
T PRK14502 566 LAKQREYSETVHIEGDKRSTNIVLNHIQQSGLEYSFGGRFYEVT-GGNDKGKAIKILNELF---RLNFGNIHTFGLGDSE 641 (694)
T ss_pred HHhhccCceeEEEcCCHHHHHHHHHHHHHcCcEEEECCEEEEeC-CCCCHHHHHHHHHHHh---CCCccceEEEEcCCcH
Confidence 0000001001112334444444444455666799999999 5999999999999999 9999999999 9999
Q ss_pred hhHHHHHHccc
Q 003025 787 SDEDMFEIIGN 797 (856)
Q Consensus 787 ND~~Mf~~ag~ 797 (856)
||++||++++.
T Consensus 642 NDisMLe~Ag~ 652 (694)
T PRK14502 642 NDYSMLETVDS 652 (694)
T ss_pred hhHHHHHhCCc
Confidence 99999999995
|
|
| >cd03814 GT1_like_2 This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.80 E-value=4.6e-18 Score=188.36 Aligned_cols=276 Identities=18% Similarity=0.138 Sum_probs=190.6
Q ss_pred HHcCCCCCEEEEeCcccchHHHHHHhhcCCCeEEEEEccCCCChHHHhcCCch----HHHHH-HhHhCCEEcccCHHHHH
Q 003025 195 EVINPEDDYVWIHDYHLMVLPTFLRRRFTRLRMGFFLHSPFPSSEIYRTLPVR----EEILK-ALLNADLIGFHTFDYAR 269 (856)
Q Consensus 195 ~~~~~~~D~VwihDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~~~~lp~r----~eil~-~ll~~dligf~t~~~~~ 269 (856)
+..+| |+|++|......+....-.+..++++.+++|..||..-........ ..+.+ ..-.+|.+-+.+.....
T Consensus 80 ~~~~p--dii~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~i~~~s~~~~~ 157 (364)
T cd03814 80 DAFAP--DVVHIATPGPLGLAALRAARRLGIPVVTSYHTDFPEYLRYYGLGPLSWLAWAYLRWFHNRADRVLVPSPSLAD 157 (364)
T ss_pred HhcCC--CEEEEeccchhhHHHHHHHHHcCCCEEEEEecChHHHhhhcccchHhHhhHHHHHHHHHhCCEEEeCCHHHHH
Confidence 55677 8999996654333333333345788999999888743221111111 11222 23357777777765554
Q ss_pred HHHHHHHhhhCceecccCceeeEEECCEEEEEEEeecccCchHHHHHhcCchHHHHHHHHHHHcCCCeEEEeccCccccC
Q 003025 270 HFLSCCSRMLGLEYQSKRGYIGLEYYGRTVGIKIMPVGIHMGQIESVLRLADKDWRVQELKQQFEGKTVLLGVDDMDIFK 349 (856)
Q Consensus 270 ~Fl~~~~r~lg~~~~~~~~~~~~~~~gr~~~i~i~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~k~iil~VdRld~~K 349 (856)
.+.. .+ ...+.++|+|+|...+.+.... .....++. ..++++++++||+.+.|
T Consensus 158 ~~~~--------------------~~--~~~~~~~~~g~~~~~~~~~~~~---~~~~~~~~--~~~~~~i~~~G~~~~~k 210 (364)
T cd03814 158 ELRA--------------------RG--FRRVRLWPRGVDTELFHPRRRD---EALRARLG--PPDRPVLLYVGRLAPEK 210 (364)
T ss_pred HHhc--------------------cC--CCceeecCCCccccccCccccc---HHHHHHhC--CCCCeEEEEEecccccc
Confidence 2221 00 1245678999998877532111 11111111 24678899999999999
Q ss_pred CHHHHHHHHHHHHHhCCCCcCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCcccEEEEcCCCCHHHHHHH
Q 003025 350 GVDLKLLAMEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDKPVTLSERAAY 429 (856)
Q Consensus 350 Gi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~~~~lv~~IN~~~~~~~~~pvv~~~~~v~~~el~al 429 (856)
|+..+++|+..+.++ |+++ |+.+|. +++...++ +..+-+.+.+.++.+++..+
T Consensus 211 ~~~~~i~~~~~l~~~-~~~~----l~i~G~-----~~~~~~~~-----------------~~~~~v~~~g~~~~~~~~~~ 263 (364)
T cd03814 211 NLEALLDADLPLRRR-PPVR----LVIVGD-----GPARARLE-----------------ARYPNVHFLGFLDGEELAAA 263 (364)
T ss_pred CHHHHHHHHHHhhhc-CCce----EEEEeC-----CchHHHHh-----------------ccCCcEEEEeccCHHHHHHH
Confidence 999999999999877 6554 777773 23322222 01123456667899999999
Q ss_pred HHhcceeeeccccccCCCcccceeeeecCCCCCCCCCCCCCCCCceEEecCCcccccccC---CceeeCCCCHHHHHHHH
Q 003025 430 YTIAECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIGCSPSLS---GAIRVNPWNIEATAEAM 506 (856)
Q Consensus 430 y~~ADv~vvtS~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~al~VnP~d~~~~A~ai 506 (856)
|+.||+++.||..||+|++++|||+|+. |+|+|+.+|..+.+. .|++++|.|.++++++|
T Consensus 264 ~~~~d~~l~~s~~e~~~~~~lEa~a~g~-----------------PvI~~~~~~~~~~i~~~~~g~~~~~~~~~~l~~~i 326 (364)
T cd03814 264 YASADVFVFPSRTETFGLVVLEAMASGL-----------------PVVAPDAGGPADIVTDGENGLLVEPGDAEAFAAAL 326 (364)
T ss_pred HHhCCEEEECcccccCCcHHHHHHHcCC-----------------CEEEcCCCCchhhhcCCcceEEcCCCCHHHHHHHH
Confidence 9999999999999999999999999954 999999999988884 48999999999999999
Q ss_pred HHHHcCCHHHHHHHHHHHhhhhhcCCHHHHHHHHHHHH
Q 003025 507 HEAIQMNEAEKQLRHEKHYRYVSTHDVAYWARSFFQDM 544 (856)
Q Consensus 507 ~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~l 544 (856)
.++++. ++++....+..++.+..+++..+++.+++.+
T Consensus 327 ~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 363 (364)
T cd03814 327 AALLAD-PELRRRMAARARAEAERRSWEAFLDNLLEAY 363 (364)
T ss_pred HHHHcC-HHHHHHHHHHHHHHHhhcCHHHHHHHHHHhh
Confidence 999974 4555666667777788899999988887643
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog |
| >cd03793 GT1_Glycogen_synthase_GSY2_like Glycogen synthase, which is most closely related to the GT1 family of glycosyltransferases, catalyzes the transfer of a glucose molecule from UDP-glucose to a terminal branch of a glycogen molecule, a rate-limit step of glycogen biosynthesis | Back alignment and domain information |
|---|
Probab=99.80 E-value=2.2e-18 Score=196.92 Aligned_cols=358 Identities=15% Similarity=0.181 Sum_probs=206.0
Q ss_pred ccccccccccCCCCCCCCCCcChHhHHHHHHHHHHHHHHHHHH-cCCCCCEEEEeCcccchHHHHHHhhcCCCeEEEEEc
Q 003025 154 QHLWPLFHYMLPFSATHGGRFDRSLWEAYVSANKIFSQRVIEV-INPEDDYVWIHDYHLMVLPTFLRRRFTRLRMGFFLH 232 (856)
Q Consensus 154 ~~lWpl~H~~~~~~~~~~~~~~~~~w~~Y~~vN~~fa~~i~~~-~~~~~D~VwihDyhl~llp~~lr~~~~~~~i~~flH 232 (856)
.-||-.|+--.+ .....+++...=.|.. ..|-..+.+. .....|+++.||++.-....+||++.++++..|+.|
T Consensus 106 ~~lW~~~~i~s~---~~~~d~nea~~fgy~~--~~~i~~~~~~~~~~~~dViH~HeWm~g~a~~~lK~~~~~VptVfTtH 180 (590)
T cd03793 106 GELWELCGIGSP---EGDRETNDAIIFGFLV--AWFLGEFAEQFDDEPAVVAHFHEWQAGVGLPLLRKRKVDVSTIFTTH 180 (590)
T ss_pred HHHHHHcCCCCC---CCCCcchHHHHHHHHH--HHHHHHHHhhccCCCCeEEEEcchhHhHHHHHHHHhCCCCCEEEEec
Confidence 458988887533 2223444443333421 1222222222 111259999999999999999999999999999999
Q ss_pred cCCCChHHHhcCCch-HHHHHHhHhCCEEcccC-------HHHHHHHHH-----HHHhhhCceecccCceeeEEECCEEE
Q 003025 233 SPFPSSEIYRTLPVR-EEILKALLNADLIGFHT-------FDYARHFLS-----CCSRMLGLEYQSKRGYIGLEYYGRTV 299 (856)
Q Consensus 233 ~PfP~~e~~~~lp~r-~eil~~ll~~dligf~t-------~~~~~~Fl~-----~~~r~lg~~~~~~~~~~~~~~~gr~~ 299 (856)
. .++-|.|-.. ..+-. ++-.|.- .-+.++.++ .+++++.++....+. ....+++..
T Consensus 181 A----T~~GR~l~~g~~~~y~-----~l~~~~~d~eA~~~~I~~r~~iE~~aa~~Ad~fttVS~it~~E--~~~Ll~~~p 249 (590)
T cd03793 181 A----TLLGRYLCAGNVDFYN-----NLDYFDVDKEAGKRGIYHRYCIERAAAHCAHVFTTVSEITAYE--AEHLLKRKP 249 (590)
T ss_pred c----cccccccccCCcccch-----hhhhcchhhhhhcccchHHHHHHHHHHhhCCEEEECChHHHHH--HHHHhCCCC
Confidence 4 4444431110 00000 0000000 002222222 122222222111110 011233333
Q ss_pred EEEEeecccCchHHHHHhcC----chHHHHHHH-----HHHHc---CCCeEEEe-ccCccc-cCCHHHHHHHHHHHHHhC
Q 003025 300 GIKIMPVGIHMGQIESVLRL----ADKDWRVQE-----LKQQF---EGKTVLLG-VDDMDI-FKGVDLKLLAMEHLLKQH 365 (856)
Q Consensus 300 ~i~i~p~GId~~~~~~~~~~----~~~~~~~~~-----l~~~~---~~k~iil~-VdRld~-~KGi~~~l~A~~~ll~~~ 365 (856)
.+ |+|+|||+..|.+.... ...++++.+ ++.+| .+++++++ +||+++ .||++.+|+|+.++-..-
T Consensus 250 d~-ViPNGid~~~f~~~~e~~~~~~~~k~ki~~f~~~~~~~~~~~~~d~tli~f~~GR~e~~nKGiDvlIeAl~rLn~~l 328 (590)
T cd03793 250 DV-VLPNGLNVKKFSALHEFQNLHAQSKEKINEFVRGHFYGHYDFDLDKTLYFFTAGRYEFSNKGADMFLEALARLNYLL 328 (590)
T ss_pred CE-EeCCCcchhhcccchhhhhhhHHhhhhhhHHHHHHHhhhcCCCCCCeEEEEEeeccccccCCHHHHHHHHHHHHHHH
Confidence 33 89999999998643211 011222222 35544 36788888 799999 999999999999875521
Q ss_pred CCC-cCceEEEEEecCCCCCc---------hhHHHHHHHHHHHHHHHhcc---------c--------------------
Q 003025 366 PKW-QGRAVLVQIANPARGRG---------KDLEEIQAEIHATCKRINET---------F-------------------- 406 (856)
Q Consensus 366 p~~-~~~vvLvqi~~p~r~~~---------~~~~~l~~~~~~lv~~IN~~---------~-------------------- 406 (856)
..- .++-|+..|..|+...+ .-.+++++.+.++..+|+.+ .
T Consensus 329 ~~~~~~~tVvafii~p~~~~~~~~~~l~g~~~~~~l~~~~~~i~~~i~~~~~~~~l~~~~~~~~~~~~~~~~~~~kr~~~ 408 (590)
T cd03793 329 KVEGSDTTVVAFFIMPAKTNNFNVESLKGQAVRKQLRDTVNSVKEKIGKRLFEAALKGKLPDLEELLDKEDKVMLKRRIF 408 (590)
T ss_pred HhcCCCCeEEEEEEecCccCCcCHHhhcchHHHHHHHHHHHHHHHHhhhhhhhHhhccCCCChhhhcchhhHHHHHHHHH
Confidence 111 12233344444554331 22455666666666666665 1
Q ss_pred ---------------------------------CC-CCcccEEEEcCCCC------HHHHHHHHHhcceeeeccccccCC
Q 003025 407 ---------------------------------GR-PGYEPVVFIDKPVT------LSERAAYYTIAECVVVTAVRDGMN 446 (856)
Q Consensus 407 ---------------------------------~~-~~~~pvv~~~~~v~------~~el~aly~~ADv~vvtS~~EG~n 446 (856)
.. .+...|+|....++ ..+...+|+.||+||+||.+||||
T Consensus 409 ~~~~~~~~p~~tH~~~~~~~D~il~~~r~~~l~N~~~drVkvif~P~~L~~~~~~~g~~y~E~~~g~dl~v~PS~yE~fG 488 (590)
T cd03793 409 ALQRHSLPPVVTHNMVDDANDPILNHIRRIQLFNSPEDRVKVVFHPEFLSSTNPLLGLDYEEFVRGCHLGVFPSYYEPWG 488 (590)
T ss_pred hhccCCCCCeeeecCCcCccCHHHHHHHHhcCcCCCCCeEEEEEcccccCCCCCcCCcchHHHhhhceEEEeccccCCCC
Confidence 00 11223444333222 235788999999999999999999
Q ss_pred CcccceeeeecCCCCCCCCCCCCCCCCceEEecCCcccc----cccC----CceeeC-------CCCHHHHHHHHHHHHc
Q 003025 447 LTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIGCS----PSLS----GAIRVN-------PWNIEATAEAMHEAIQ 511 (856)
Q Consensus 447 Lv~~Ea~a~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~----~~l~----~al~Vn-------P~d~~~~A~ai~~aL~ 511 (856)
++++|||||+. |+|+|..+|.. +.+. .|+.|. +.+++++|++|.+.++
T Consensus 489 ~~~lEAma~G~-----------------PvI~t~~~gf~~~v~E~v~~~~~~gi~V~~r~~~~~~e~v~~La~~m~~~~~ 551 (590)
T cd03793 489 YTPAECTVMGI-----------------PSITTNLSGFGCFMEEHIEDPESYGIYIVDRRFKSPDESVQQLTQYMYEFCQ 551 (590)
T ss_pred cHHHHHHHcCC-----------------CEEEccCcchhhhhHHHhccCCCceEEEecCCccchHHHHHHHHHHHHHHhC
Confidence 99999999954 99999999984 4432 378887 5667899999999887
Q ss_pred CCHHHHHHHHHHHhhhhhcCCHHHHHHHHHHHHH
Q 003025 512 MNEAEKQLRHEKHYRYVSTHDVAYWARSFFQDME 545 (856)
Q Consensus 512 m~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~l~ 545 (856)
++..++........+.....++.+-+..+++.-.
T Consensus 552 ~~~r~~~~~r~~~~r~s~~f~W~~~~~~Y~~A~~ 585 (590)
T cd03793 552 LSRRQRIIQRNRTERLSDLLDWRNLGRYYRKARQ 585 (590)
T ss_pred CcHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 6544443333333355566777777776665433
|
GSY2, the member of this family in S. cerevisiae, has been shown to possess glycogen synthase activity. |
| >cd03798 GT1_wlbH_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.80 E-value=4.6e-18 Score=187.47 Aligned_cols=282 Identities=22% Similarity=0.225 Sum_probs=197.0
Q ss_pred HcCCCCCEEEEeCcccchHHHHHHhhcCCCeEEEEEccCCCChHHHhcCCchHHHHHHhHhCCEEcccCHHHHHHHHHHH
Q 003025 196 VINPEDDYVWIHDYHLMVLPTFLRRRFTRLRMGFFLHSPFPSSEIYRTLPVREEILKALLNADLIGFHTFDYARHFLSCC 275 (856)
Q Consensus 196 ~~~~~~D~VwihDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~~~~lp~r~eil~~ll~~dligf~t~~~~~~Fl~~~ 275 (856)
..++ |+|++|......+......+..++++.+..|.+++....... ..+......+-.+|.+-+.+......+.+..
T Consensus 91 ~~~~--dii~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~~~~-~~~~~~~~~~~~~d~ii~~s~~~~~~~~~~~ 167 (377)
T cd03798 91 RFRP--DLIHAHFAYPDGFAAALLKRKLGIPLVVTLHGSDVNLLPRKR-LLRALLRRALRRADAVIAVSEALADELKALG 167 (377)
T ss_pred cCCC--CEEEEeccchHHHHHHHHHHhcCCCEEEEeecchhcccCchh-hHHHHHHHHHhcCCeEEeCCHHHHHHHHHhc
Confidence 4455 899999655544444444444568899999987765432211 1233333455678999988876666655411
Q ss_pred HhhhCceecccCceeeEEECCEEEEEEEeecccCchHHHHHhcCchHHHHHHHHHHHcCCCeEEEeccCccccCCHHHHH
Q 003025 276 SRMLGLEYQSKRGYIGLEYYGRTVGIKIMPVGIHMGQIESVLRLADKDWRVQELKQQFEGKTVLLGVDDMDIFKGVDLKL 355 (856)
Q Consensus 276 ~r~lg~~~~~~~~~~~~~~~gr~~~i~i~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~k~iil~VdRld~~KGi~~~l 355 (856)
.....+.++|+|+|...+..... .....+ ....++..++++||+++.||+..++
T Consensus 168 --------------------~~~~~~~~i~~~~~~~~~~~~~~-----~~~~~~-~~~~~~~~i~~~g~~~~~k~~~~li 221 (377)
T cd03798 168 --------------------IDPEKVTVIPNGVDTERFSPADR-----AEARKL-GLPEDKKVILFVGRLVPRKGIDYLI 221 (377)
T ss_pred --------------------CCCCceEEcCCCcCcccCCCcch-----HHHHhc-cCCCCceEEEEeccCccccCHHHHH
Confidence 11235677899999877653211 111111 1224678999999999999999999
Q ss_pred HHHHHHHHhCCCCcCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCcccEEEEcCCCCHHHHHHHHHhcce
Q 003025 356 LAMEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDKPVTLSERAAYYTIAEC 435 (856)
Q Consensus 356 ~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~~~~lv~~IN~~~~~~~~~pvv~~~~~v~~~el~aly~~ADv 435 (856)
+|++.+.+++|++ .|+.+|. ++....+++.++ + .+..+.+.+.+.++.+++..+|+.||+
T Consensus 222 ~~~~~~~~~~~~~----~l~i~g~-----~~~~~~~~~~~~----~-------~~~~~~v~~~g~~~~~~~~~~~~~ad~ 281 (377)
T cd03798 222 EALARLLKKRPDV----HLVIVGD-----GPLREALEALAA----E-------LGLEDRVTFLGAVPHEEVPAYYAAADV 281 (377)
T ss_pred HHHHHHHhcCCCe----EEEEEcC-----CcchHHHHHHHH----h-------cCCcceEEEeCCCCHHHHHHHHHhcCe
Confidence 9999998887754 4776663 233333333332 2 134456677889999999999999999
Q ss_pred eeeccccccCCCcccceeeeecCCCCCCCCCCCCCCCCceEEecCCcccccccC---CceeeCCCCHHHHHHHHHHHHcC
Q 003025 436 VVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIGCSPSLS---GAIRVNPWNIEATAEAMHEAIQM 512 (856)
Q Consensus 436 ~vvtS~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~al~VnP~d~~~~A~ai~~aL~m 512 (856)
++.||..||+|++++|||+|+. |+|+|+.+|..+.+. .|+++++.|+++++++|.+++++
T Consensus 282 ~i~~~~~~~~~~~~~Ea~~~G~-----------------pvI~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~i~~~~~~ 344 (377)
T cd03798 282 FVLPSLREGFGLVLLEAMACGL-----------------PVVATDVGGIPEIITDGENGLLVPPGDPEALAEAILRLLAD 344 (377)
T ss_pred eecchhhccCChHHHHHHhcCC-----------------CEEEecCCChHHHhcCCcceeEECCCCHHHHHHHHHHHhcC
Confidence 9999999999999999999954 999999998888773 36899999999999999999987
Q ss_pred CHHHHHHHHHHHhhhhhcCCHHHHHHHHHHHHH
Q 003025 513 NEAEKQLRHEKHYRYVSTHDVAYWARSFFQDME 545 (856)
Q Consensus 513 ~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~l~ 545 (856)
+.. +...+........+++..+++.+.+.++
T Consensus 345 ~~~--~~~~~~~~~~~~~~s~~~~~~~~~~~~~ 375 (377)
T cd03798 345 PWL--RLGRAARRRVAERFSWENVAERLLELYR 375 (377)
T ss_pred cHH--HHhHHHHHHHHHHhhHHHHHHHHHHHHh
Confidence 654 2222333444566788888887776654
|
wlbH in Bordetella parapertussis has been shown to be required for the biosynthesis of a trisaccharide that, when attached to the B. pertussis lipopolysaccharide (LPS) core (band B), generates band A LPS. |
| >cd03817 GT1_UGDG_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.80 E-value=5e-18 Score=188.09 Aligned_cols=270 Identities=21% Similarity=0.258 Sum_probs=185.7
Q ss_pred HHHHcCCCCCEEEEeCcccchHHHHHHhhcCCCeEEEEEccCCCChHHHhcCC---chH----HH-HHHhHhCCEEcccC
Q 003025 193 VIEVINPEDDYVWIHDYHLMVLPTFLRRRFTRLRMGFFLHSPFPSSEIYRTLP---VRE----EI-LKALLNADLIGFHT 264 (856)
Q Consensus 193 i~~~~~~~~D~VwihDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~~~~lp---~r~----ei-l~~ll~~dligf~t 264 (856)
+.+..+| |+|++|+...+........+..++++.+.+|.+|+....+.... ... .+ ...+-.+|.+-+.+
T Consensus 79 ~~~~~~~--Div~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~i~~~s 156 (374)
T cd03817 79 ILKELGP--DIVHTHTPFSLGLLGLRVARKLGIPVVATYHTMYEDYTHYVPLGRLLARAVVRRKLSRRFYNRCDAVIAPS 156 (374)
T ss_pred HHhhcCC--CEEEECCchhhhhHHHHHHHHcCCCEEEEecCCHHHHHHHHhcccchhHHHHHHHHHHHHhhhCCEEEecc
Confidence 3455666 89999987655444444444458899999998877332221111 000 11 12234577777777
Q ss_pred HHHHHHHHHHHHhhhCceecccCceeeEEECCEEEEEEEeecccCchHHHHHhcCchHHHHHHHHHHHc---CCCeEEEe
Q 003025 265 FDYARHFLSCCSRMLGLEYQSKRGYIGLEYYGRTVGIKIMPVGIHMGQIESVLRLADKDWRVQELKQQF---EGKTVLLG 341 (856)
Q Consensus 265 ~~~~~~Fl~~~~r~lg~~~~~~~~~~~~~~~gr~~~i~i~p~GId~~~~~~~~~~~~~~~~~~~l~~~~---~~k~iil~ 341 (856)
......+.. .+....+.++|+|+|...+..... .. .++.+ +++++|++
T Consensus 157 ~~~~~~~~~---------------------~~~~~~~~vi~~~~~~~~~~~~~~----~~----~~~~~~~~~~~~~i~~ 207 (374)
T cd03817 157 EKIADLLRE---------------------YGVKRPIEVIPTGIDLDRFEPVDG----DD----ERRKLGIPEDEPVLLY 207 (374)
T ss_pred HHHHHHHHh---------------------cCCCCceEEcCCccchhccCccch----hH----HHHhcCCCCCCeEEEE
Confidence 654333321 011123678899999877653211 11 12222 46788999
Q ss_pred ccCccccCCHHHHHHHHHHHHHhCCCCcCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCcccEEEEcCCC
Q 003025 342 VDDMDIFKGVDLKLLAMEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDKPV 421 (856)
Q Consensus 342 VdRld~~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~~~~lv~~IN~~~~~~~~~pvv~~~~~v 421 (856)
+||+.+.||+..+++|++.+.++.+++ .|+.+|. ++.. .++++++++. +..+.+.+.+.+
T Consensus 208 ~G~~~~~k~~~~l~~~~~~~~~~~~~~----~l~i~G~-----~~~~----~~~~~~~~~~-------~~~~~v~~~g~~ 267 (374)
T cd03817 208 VGRLAKEKNIDFLIRAFARLLKEEPDV----KLVIVGD-----GPER----EELEELAREL-------GLADRVIFTGFV 267 (374)
T ss_pred EeeeecccCHHHHHHHHHHHHHhCCCe----EEEEEeC-----CchH----HHHHHHHHHc-------CCCCcEEEeccC
Confidence 999999999999999999998886654 4777763 2332 2333343332 223456678899
Q ss_pred CHHHHHHHHHhcceeeeccccccCCCcccceeeeecCCCCCCCCCCCCCCCCceEEecCCcccccccC---CceeeCCCC
Q 003025 422 TLSERAAYYTIAECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIGCSPSLS---GAIRVNPWN 498 (856)
Q Consensus 422 ~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~al~VnP~d 498 (856)
+.+++..+|+.||+++.||..||+|++.+|||+|+. |+|+|..+|..+.+. +|+++++.|
T Consensus 268 ~~~~~~~~~~~ad~~l~~s~~e~~~~~~~Ea~~~g~-----------------PvI~~~~~~~~~~i~~~~~g~~~~~~~ 330 (374)
T cd03817 268 PREELPDYYKAADLFVFASTTETQGLVLLEAMAAGL-----------------PVVAVDAPGLPDLVADGENGFLFPPGD 330 (374)
T ss_pred ChHHHHHHHHHcCEEEecccccCcChHHHHHHHcCC-----------------cEEEeCCCChhhheecCceeEEeCCCC
Confidence 999999999999999999999999999999999954 999999998888873 489999988
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHhhhhhcCC
Q 003025 499 IEATAEAMHEAIQMNEAEKQLRHEKHYRYVSTHD 532 (856)
Q Consensus 499 ~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~ 532 (856)
. +++++|.++++++... +...++.++++..++
T Consensus 331 ~-~~~~~i~~l~~~~~~~-~~~~~~~~~~~~~~~ 362 (374)
T cd03817 331 E-ALAEALLRLLQDPELR-RRLSKNAEESAEKFS 362 (374)
T ss_pred H-HHHHHHHHHHhChHHH-HHHHHHHHHHHHHHH
Confidence 8 9999999999876543 555566777776665
|
UDP-glucose-diacylglycerol glucosyltransferase (UGDG; also known as 1,2-diacylglycerol 3-glucosyltransferase) catalyzes the transfer of glucose from UDP-glucose to 1,2-diacylglycerol forming 3-D-glucosyl-1,2-diacylglycerol. |
| >cd03794 GT1_wbuB_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.80 E-value=9.3e-18 Score=186.49 Aligned_cols=278 Identities=19% Similarity=0.205 Sum_probs=195.2
Q ss_pred HcCCCCCEEEEeC-cccchHHHHHHhhcCCCeEEEEEccCCCChHHHhcCCc--------hHHH-HHHhHhCCEEcccCH
Q 003025 196 VINPEDDYVWIHD-YHLMVLPTFLRRRFTRLRMGFFLHSPFPSSEIYRTLPV--------REEI-LKALLNADLIGFHTF 265 (856)
Q Consensus 196 ~~~~~~D~VwihD-yhl~llp~~lr~~~~~~~i~~flH~PfP~~e~~~~lp~--------r~ei-l~~ll~~dligf~t~ 265 (856)
..+| |+|++|. ..+..++....++..+.++.+.+|..||.......... ...+ -..+-.+|.+-+.+.
T Consensus 97 ~~~~--D~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~s~ 174 (394)
T cd03794 97 RRRP--DVIIATSPPLLIALAALLLARLKGAPFVLEVRDLWPESAVALGLLKNGSLLYRLLRKLERLIYRRADAIVVISP 174 (394)
T ss_pred ccCC--CEEEEcCChHHHHHHHHHHHHhcCCCEEEEehhhcchhHHHccCccccchHHHHHHHHHHHHHhcCCEEEEECH
Confidence 3345 8999998 44556666666666689999999998886533221111 1111 123456888888888
Q ss_pred HHHHHHHHHHHhhhCceecccCceeeEEECCEEEEEEEeecccCchHHHHHhcCchHHHHHHHHHHHcCCCeEEEeccCc
Q 003025 266 DYARHFLSCCSRMLGLEYQSKRGYIGLEYYGRTVGIKIMPVGIHMGQIESVLRLADKDWRVQELKQQFEGKTVLLGVDDM 345 (856)
Q Consensus 266 ~~~~~Fl~~~~r~lg~~~~~~~~~~~~~~~gr~~~i~i~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~k~iil~VdRl 345 (856)
...+.+.. .+ ....++.++|+|++...+..... .... .......++.+++++||+
T Consensus 175 ~~~~~~~~-----~~---------------~~~~~~~~i~~~~~~~~~~~~~~----~~~~-~~~~~~~~~~~i~~~G~~ 229 (394)
T cd03794 175 GMREYLVR-----RG---------------VPPEKISVIPNGVDLELFKPPPA----DESL-RKELGLDDKFVVLYAGNI 229 (394)
T ss_pred HHHHHHHh-----cC---------------CCcCceEEcCCCCCHHHcCCccc----hhhh-hhccCCCCcEEEEEecCc
Confidence 77766652 01 11235677899999877653211 1111 111122578899999999
Q ss_pred cccCCHHHHHHHHHHHHHhCCCCcCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCcccEEEEcCCCCHHH
Q 003025 346 DIFKGVDLKLLAMEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDKPVTLSE 425 (856)
Q Consensus 346 d~~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~~~~lv~~IN~~~~~~~~~pvv~~~~~v~~~e 425 (856)
.+.||+..+++|+.++.+. |++ .|+.+|. ++....+++.+ .. .+...+++ .+.++.++
T Consensus 230 ~~~k~~~~l~~~~~~l~~~-~~~----~l~i~G~-----~~~~~~~~~~~----~~-------~~~~~v~~-~g~~~~~~ 287 (394)
T cd03794 230 GRAQGLDTLLEAAALLKDR-PDI----RFLIVGD-----GPEKEELKELA----KA-------LGLDNVTF-LGRVPKEE 287 (394)
T ss_pred ccccCHHHHHHHHHHHhhc-CCe----EEEEeCC-----cccHHHHHHHH----HH-------cCCCcEEE-eCCCChHH
Confidence 9999999999999999776 554 4777763 33433343332 11 12334554 45899999
Q ss_pred HHHHHHhcceeeeccccccC-----CCcccceeeeecCCCCCCCCCCCCCCCCceEEecCCcccccccC---CceeeCCC
Q 003025 426 RAAYYTIAECVVVTAVRDGM-----NLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIGCSPSLS---GAIRVNPW 497 (856)
Q Consensus 426 l~aly~~ADv~vvtS~~EG~-----nLv~~Ea~a~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~al~VnP~ 497 (856)
+.++|+.||++++||..|++ +++.+|||+|+. |+|+|+.+|..+.+. .|+++++.
T Consensus 288 ~~~~~~~~di~i~~~~~~~~~~~~~p~~~~Ea~~~G~-----------------pvi~~~~~~~~~~~~~~~~g~~~~~~ 350 (394)
T cd03794 288 LPELLAAADVGLVPLKPGPAFEGVSPSKLFEYMAAGK-----------------PVLASVDGESAELVEEAGAGLVVPPG 350 (394)
T ss_pred HHHHHHhhCeeEEeccCcccccccCchHHHHHHHCCC-----------------cEEEecCCCchhhhccCCcceEeCCC
Confidence 99999999999999999876 555799999954 999999999998884 48999999
Q ss_pred CHHHHHHHHHHHHcCCHHHHHHHHHHHhhhhh-cCCHHHHHHHH
Q 003025 498 NIEATAEAMHEAIQMNEAEKQLRHEKHYRYVS-THDVAYWARSF 540 (856)
Q Consensus 498 d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~-~~~~~~W~~~~ 540 (856)
|+++++++|.++++ +++++....++.++++. .+++..+++++
T Consensus 351 ~~~~l~~~i~~~~~-~~~~~~~~~~~~~~~~~~~~s~~~~~~~~ 393 (394)
T cd03794 351 DPEALAAAILELLD-DPEERAEMGENGRRYVEEKFSREKLAERL 393 (394)
T ss_pred CHHHHHHHHHHHHh-ChHHHHHHHHHHHHHHHHhhcHHHHHHhc
Confidence 99999999999995 45666666677777776 78888888765
|
wbuB in E. coli is involved in the biosynthesis of the O26 O-antigen. It has been proposed to function as an N-acetyl-L-fucosamine (L-FucNAc) transferase. |
| >cd03807 GT1_WbnK_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.79 E-value=1e-17 Score=184.67 Aligned_cols=282 Identities=17% Similarity=0.164 Sum_probs=190.6
Q ss_pred HHHcCCCCCEEEEeCcccchHHHHHHhhcCCCeEEEEEccCCCChHHHhcCCchHHHHHHh-HhCCEEcccCHHHHHHHH
Q 003025 194 IEVINPEDDYVWIHDYHLMVLPTFLRRRFTRLRMGFFLHSPFPSSEIYRTLPVREEILKAL-LNADLIGFHTFDYARHFL 272 (856)
Q Consensus 194 ~~~~~~~~D~VwihDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~~~~lp~r~eil~~l-l~~dligf~t~~~~~~Fl 272 (856)
++..+| |+|++|+++......++.......++.+..|.-++...-+ .......+.+-+ -.+|.+...+......+.
T Consensus 76 ~~~~~~--div~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~i~~s~~~~~~~~ 152 (365)
T cd03807 76 IRRLRP--DVVHTWMYHADLYGGLAARLAGVPPVIWGIRHSDLDLGKK-STRLVARLRRLLSSFIPLIVANSAAAAEYHQ 152 (365)
T ss_pred HHhhCC--CEEEeccccccHHHHHHHHhcCCCcEEEEecCCcccccch-hHhHHHHHHHHhccccCeEEeccHHHHHHHH
Confidence 344566 8999999997777776666546788999999766553200 001111111111 235665444443333332
Q ss_pred HHHHhhhCceecccCceeeEEECCEEEEEEEeecccCchHHHHHhcCchHHHHHHHHHHHc---CCCeEEEeccCccccC
Q 003025 273 SCCSRMLGLEYQSKRGYIGLEYYGRTVGIKIMPVGIHMGQIESVLRLADKDWRVQELKQQF---EGKTVLLGVDDMDIFK 349 (856)
Q Consensus 273 ~~~~r~lg~~~~~~~~~~~~~~~gr~~~i~i~p~GId~~~~~~~~~~~~~~~~~~~l~~~~---~~k~iil~VdRld~~K 349 (856)
.. +. ...++.++|+|+|...+..... ....+++++ .++.+++++||+++.|
T Consensus 153 ~~-----~~---------------~~~~~~vi~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~i~~~G~~~~~K 206 (365)
T cd03807 153 AI-----GY---------------PPKKIVVIPNGVDTERFSPDLD------ARARLREELGLPEDTFLIGIVARLHPQK 206 (365)
T ss_pred Hc-----CC---------------ChhheeEeCCCcCHHhcCCccc------chHHHHHhcCCCCCCeEEEEecccchhc
Confidence 20 11 1234567899999877643211 112233334 4678899999999999
Q ss_pred CHHHHHHHHHHHHHhCCCCcCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCcccEEEEcCCCCHHHHHHH
Q 003025 350 GVDLKLLAMEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDKPVTLSERAAY 429 (856)
Q Consensus 350 Gi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~~~~lv~~IN~~~~~~~~~pvv~~~~~v~~~el~al 429 (856)
|+..+++|+..+.+++|+++ |+.+|... .....+.... .+. +..+.+.+.+. .+++..+
T Consensus 207 ~~~~li~a~~~l~~~~~~~~----l~i~G~~~-----~~~~~~~~~~---~~~-------~~~~~v~~~g~--~~~~~~~ 265 (365)
T cd03807 207 DHATLLRAAALLLKKFPNAR----LLLVGDGP-----DRANLELLAL---KEL-------GLEDKVILLGE--RSDVPAL 265 (365)
T ss_pred CHHHHHHHHHHHHHhCCCeE----EEEecCCc-----chhHHHHHHH---Hhc-------CCCceEEEccc--cccHHHH
Confidence 99999999999998887654 77777432 2222222221 111 23334555554 4689999
Q ss_pred HHhcceeeeccccccCCCcccceeeeecCCCCCCCCCCCCCCCCceEEecCCcccccccC-CceeeCCCCHHHHHHHHHH
Q 003025 430 YTIAECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIGCSPSLS-GAIRVNPWNIEATAEAMHE 508 (856)
Q Consensus 430 y~~ADv~vvtS~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~-~al~VnP~d~~~~A~ai~~ 508 (856)
|+.||++++||..||+|++++|||+|+. |+|+|+.+|..+.+. .|+.+++.|+++++++|.+
T Consensus 266 ~~~adi~v~ps~~e~~~~~~~Ea~a~g~-----------------PvI~~~~~~~~e~~~~~g~~~~~~~~~~l~~~i~~ 328 (365)
T cd03807 266 LNALDVFVLSSLSEGFPNVLLEAMACGL-----------------PVVATDVGDNAELVGDTGFLVPPGDPEALAEAIEA 328 (365)
T ss_pred HHhCCEEEeCCccccCCcHHHHHHhcCC-----------------CEEEcCCCChHHHhhcCCEEeCCCCHHHHHHHHHH
Confidence 9999999999999999999999999955 999999999988885 4999999999999999999
Q ss_pred HHcCCHHHHHHHHHHHhhhhh-cCCHHHHHHHHHHH
Q 003025 509 AIQMNEAEKQLRHEKHYRYVS-THDVAYWARSFFQD 543 (856)
Q Consensus 509 aL~m~~~er~~r~~~~~~~v~-~~~~~~W~~~~l~~ 543 (856)
+++.+ +++....++.++++. .+++...++.+.+-
T Consensus 329 l~~~~-~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~ 363 (365)
T cd03807 329 LLADP-ALRQALGEAARERIEENFSIEAMVEAYEEL 363 (365)
T ss_pred HHhCh-HHHHHHHHHHHHHHHHhCCHHHHHHHHHHH
Confidence 99866 455555566677765 47888888877653
|
WbnK in Shigella dysenteriae has been shown to be involved in the type 7 O-antigen biosynthesis. |
| >PRK10125 putative glycosyl transferase; Provisional | Back alignment and domain information |
|---|
Probab=99.79 E-value=4e-18 Score=194.16 Aligned_cols=186 Identities=12% Similarity=0.021 Sum_probs=126.2
Q ss_pred EEEEEeecccCchHHHHHhcCchHHHHHHHHHHHcCCCeEEEeccC-c-cccCCHHHHHHHHHHHHHhCCCCcCceEEEE
Q 003025 299 VGIKIMPVGIHMGQIESVLRLADKDWRVQELKQQFEGKTVLLGVDD-M-DIFKGVDLKLLAMEHLLKQHPKWQGRAVLVQ 376 (856)
Q Consensus 299 ~~i~i~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~k~iil~VdR-l-d~~KGi~~~l~A~~~ll~~~p~~~~~vvLvq 376 (856)
.++.++|+|||++.+..... . ...+ ...++++|++|+| + ++.||+..+++|+.++ .+ ++.|++
T Consensus 212 ~~i~vI~NGid~~~~~~~~~---~----~~~~-~~~~~~~il~v~~~~~~~~Kg~~~li~A~~~l---~~----~~~L~i 276 (405)
T PRK10125 212 GRCRIINNGIDMATEAILAE---L----PPVR-ETQGKPKIAVVAHDLRYDGKTDQQLVREMMAL---GD----KIELHT 276 (405)
T ss_pred CCEEEeCCCcCccccccccc---c----cccc-cCCCCCEEEEEEeccccCCccHHHHHHHHHhC---CC----CeEEEE
Confidence 36778999999753221100 0 0001 1246788999999 4 4789999999999875 23 356888
Q ss_pred EecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCcccEEEEcCCCCHHHHHHHHHhcceeeeccccccCCCcccceeeee
Q 003025 377 IANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDKPVTLSERAAYYTIAECVVVTAVRDGMNLTPYEYIVCR 456 (856)
Q Consensus 377 i~~p~r~~~~~~~~l~~~~~~lv~~IN~~~~~~~~~pvv~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~a~~ 456 (856)
+|... ... . ..+.++....+..++..+|+.||+||+||..|||++|++|||||+
T Consensus 277 vG~g~-----~~~--~-------------------~~v~~~g~~~~~~~l~~~y~~aDvfV~pS~~Egfp~vilEAmA~G 330 (405)
T PRK10125 277 FGKFS-----PFT--A-------------------GNVVNHGFETDKRKLMSALNQMDALVFSSRVDNYPLILCEALSIG 330 (405)
T ss_pred EcCCC-----ccc--c-------------------cceEEecCcCCHHHHHHHHHhCCEEEECCccccCcCHHHHHHHcC
Confidence 87421 100 0 113333323367899999999999999999999999999999995
Q ss_pred cCCCCCCCCCCCCCCCCceEEecCCcccccccC--CceeeCCCCHHHHHHHHHHHHcCCHHHHHHHHHHHhhh-hhcCCH
Q 003025 457 QGVSGSESSSESSAPKKSMLVVSEFIGCSPSLS--GAIRVNPWNIEATAEAMHEAIQMNEAEKQLRHEKHYRY-VSTHDV 533 (856)
Q Consensus 457 ~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~--~al~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~-v~~~~~ 533 (856)
. |||+|+.+|+.+.+. +|++|+|.|++++|+++...+... ......++.++. ...++.
T Consensus 331 ~-----------------PVVat~~gG~~Eiv~~~~G~lv~~~d~~~La~~~~~~~~~~--~~~~~~~~~r~~~~~~fs~ 391 (405)
T PRK10125 331 V-----------------PVIATHSDAAREVLQKSGGKTVSEEEVLQLAQLSKPEIAQA--VFGTTLAEFSQRSRAAYSG 391 (405)
T ss_pred C-----------------CEEEeCCCChHHhEeCCcEEEECCCCHHHHHhccCHHHHHH--hhhhHHHHHHHHHHHhCCH
Confidence 4 999999999988773 599999999999998654333210 000011223333 455888
Q ss_pred HHHHHHHHHHH
Q 003025 534 AYWARSFFQDM 544 (856)
Q Consensus 534 ~~W~~~~l~~l 544 (856)
...++++++-.
T Consensus 392 ~~~~~~y~~lY 402 (405)
T PRK10125 392 QQMLEEYVNFY 402 (405)
T ss_pred HHHHHHHHHHH
Confidence 88888776644
|
|
| >cd04949 GT1_gtfA_like This family is most closely related to the GT1 family of glycosyltransferases and is named after gtfA in Streptococcus gordonii, where it plays a role in the O-linked glycosylation of GspB, a cell surface glycoprotein involved in platelet binding | Back alignment and domain information |
|---|
Probab=99.79 E-value=4.2e-18 Score=191.66 Aligned_cols=281 Identities=17% Similarity=0.111 Sum_probs=188.6
Q ss_pred HHHHHHHHHHHHHHHcCCCCCEEEEeCcccchHHHHHHhhcCCCeEEEEEccCCC---ChHHHhcC-CchHHHHHHhHhC
Q 003025 182 YVSANKIFSQRVIEVINPEDDYVWIHDYHLMVLPTFLRRRFTRLRMGFFLHSPFP---SSEIYRTL-PVREEILKALLNA 257 (856)
Q Consensus 182 Y~~vN~~fa~~i~~~~~~~~D~VwihDyhl~llp~~lr~~~~~~~i~~flH~PfP---~~e~~~~l-p~r~eil~~ll~~ 257 (856)
..+.-+.|.+++.. .. ..|+|.+|-.+.... .+.......+...++|...- .......+ ...+.++..+-.+
T Consensus 83 ~~~l~~~~l~~l~~-~~-~~diii~~~~~~~~~--~~~~~~~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (372)
T cd04949 83 EEELFAFFLDELNK-DT-KPDVFILDRPTLDGQ--ALLNMKKAAKVVVVLHSNHVSDNNDPVHSLINNFYEYVFENLDKV 158 (372)
T ss_pred HHHHHHHHHHHHhc-CC-CCCEEEECCccccch--hHHhccCCceEEEEEChHHhCCcccccccccchhhHHHHhChhhC
Confidence 33444445555543 22 348999987776655 23333445667788885321 11000000 1124455556678
Q ss_pred CEEcccCHHHHHHHHHHHHhhhCceecccCceeeEEECCEEEEEEEeecccCchHHHHHhcCchHHHHHHHHHHHcCCCe
Q 003025 258 DLIGFHTFDYARHFLSCCSRMLGLEYQSKRGYIGLEYYGRTVGIKIMPVGIHMGQIESVLRLADKDWRVQELKQQFEGKT 337 (856)
Q Consensus 258 dligf~t~~~~~~Fl~~~~r~lg~~~~~~~~~~~~~~~gr~~~i~i~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~k~ 337 (856)
|.|.+.+..-.+.+.... + ....+.++|+|++...+.... .....+.
T Consensus 159 d~ii~~s~~~~~~l~~~~----~----------------~~~~v~~ip~g~~~~~~~~~~-------------~~~~~~~ 205 (372)
T cd04949 159 DGVIVATEQQKQDLQKQF----G----------------NYNPIYTIPVGSIDPLKLPAQ-------------FKQRKPH 205 (372)
T ss_pred CEEEEccHHHHHHHHHHh----C----------------CCCceEEEcccccChhhcccc-------------hhhcCCC
Confidence 888888876665554311 1 011267899999987664210 0113566
Q ss_pred EEEeccCccccCCHHHHHHHHHHHHHhCCCCcCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCcccEEEE
Q 003025 338 VLLGVDDMDIFKGVDLKLLAMEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFI 417 (856)
Q Consensus 338 iil~VdRld~~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~~~~lv~~IN~~~~~~~~~pvv~~ 417 (856)
.++++||+.+.||+..+++|+.++.+++|+++ |+.+|.. ++...++..+ .+. +....+.+
T Consensus 206 ~i~~vgrl~~~K~~~~li~a~~~l~~~~~~~~----l~i~G~g-----~~~~~~~~~~----~~~-------~~~~~v~~ 265 (372)
T cd04949 206 KIITVARLAPEKQLDQLIKAFAKVVKQVPDAT----LDIYGYG-----DEEEKLKELI----EEL-------GLEDYVFL 265 (372)
T ss_pred eEEEEEccCcccCHHHHHHHHHHHHHhCCCcE----EEEEEeC-----chHHHHHHHH----HHc-------CCcceEEE
Confidence 89999999999999999999999999999865 7777743 2323333332 222 23345666
Q ss_pred cCCCCHHHHHHHHHhcceeeeccccccCCCcccceeeeecCCCCCCCCCCCCCCCCceEEecCCc-ccccccC---Ccee
Q 003025 418 DKPVTLSERAAYYTIAECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFI-GCSPSLS---GAIR 493 (856)
Q Consensus 418 ~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~g~lV~Se~~-G~~~~l~---~al~ 493 (856)
.|. .+++.++|+.||++|+||..||||++.+|||+|+. |+|+|+.. |..+.+. +|++
T Consensus 266 ~g~--~~~~~~~~~~ad~~v~~S~~Eg~~~~~lEAma~G~-----------------PvI~~~~~~g~~~~v~~~~~G~l 326 (372)
T cd04949 266 KGY--TRDLDEVYQKAQLSLLTSQSEGFGLSLMEALSHGL-----------------PVISYDVNYGPSEIIEDGENGYL 326 (372)
T ss_pred cCC--CCCHHHHHhhhhEEEecccccccChHHHHHHhCCC-----------------CEEEecCCCCcHHHcccCCCceE
Confidence 663 56799999999999999999999999999999954 99999987 7777773 4899
Q ss_pred eCCCCHHHHHHHHHHHHcCCHHHHHHHHHHHhhhhhcCCHHHHHHH
Q 003025 494 VNPWNIEATAEAMHEAIQMNEAEKQLRHEKHYRYVSTHDVAYWARS 539 (856)
Q Consensus 494 VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~ 539 (856)
++|.|++++|++|..+++.+ +.+....++.++...++++..++++
T Consensus 327 v~~~d~~~la~~i~~ll~~~-~~~~~~~~~a~~~~~~~s~~~~~~~ 371 (372)
T cd04949 327 VPKGDIEALAEAIIELLNDP-KLLQKFSEAAYENAERYSEENVWEK 371 (372)
T ss_pred eCCCcHHHHHHHHHHHHcCH-HHHHHHHHHHHHHHHHhhHHHHHhc
Confidence 99999999999999999865 4555556666666667776666553
|
In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltra |
| >PHA01633 putative glycosyl transferase group 1 | Back alignment and domain information |
|---|
Probab=99.79 E-value=1.6e-18 Score=190.24 Aligned_cols=193 Identities=17% Similarity=0.181 Sum_probs=142.4
Q ss_pred eecccCchHHHHHhcCchHHHHHHHHHHHcCCCeEEEeccCccccCCHHHHHHHHHHHHHhCCCCcCceEEEEEecCCCC
Q 003025 304 MPVGIHMGQIESVLRLADKDWRVQELKQQFEGKTVLLGVDDMDIFKGVDLKLLAMEHLLKQHPKWQGRAVLVQIANPARG 383 (856)
Q Consensus 304 ~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~k~iil~VdRld~~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~ 383 (856)
+|.|||.+.|.+... ...+..+++...+.+..++++|+|+++.||+..+++|++++.+++|++..++.|+.+|.
T Consensus 118 I~~GVD~~~f~p~~~--~~~~~r~~~~~~~~~~~~i~~vGRl~~~KG~~~LI~A~~~L~~~~p~~~~~i~l~ivG~---- 191 (335)
T PHA01633 118 VFHGINFKIVENAEK--LVPQLKQKLDKDFPDTIKFGIVSGLTKRKNMDLMLQVFNELNTKYPDIAKKIHFFVISH---- 191 (335)
T ss_pred eeCCCChhhcCccch--hhHHHHHHhCcCCCCCeEEEEEeCCccccCHHHHHHHHHHHHHhCCCccccEEEEEEcH----
Confidence 467999988863210 01112222222235677899999999999999999999999999998876677776651
Q ss_pred CchhHHHHHHHHHHHHHHHhcccCCCCcc-cEEEEc--CCCCHHHHHHHHHhcceeeeccccccCCCcccceeeeecCCC
Q 003025 384 RGKDLEEIQAEIHATCKRINETFGRPGYE-PVVFID--KPVTLSERAAYYTIAECVVVTAVRDGMNLTPYEYIVCRQGVS 460 (856)
Q Consensus 384 ~~~~~~~l~~~~~~lv~~IN~~~~~~~~~-pvv~~~--~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~a~~~~~~ 460 (856)
. ++.++ +.. .|.++. +.++.+++.++|+.||+||+||..||||++++|||+|+.
T Consensus 192 --~-------~~~~l-----------~l~~~V~f~g~~G~~~~~dl~~~y~~aDifV~PS~~EgfGlvlLEAMA~G~--- 248 (335)
T PHA01633 192 --K-------QFTQL-----------EVPANVHFVAEFGHNSREYIFAFYGAMDFTIVPSGTEGFGMPVLESMAMGT--- 248 (335)
T ss_pred --H-------HHHHc-----------CCCCcEEEEecCCCCCHHHHHHHHHhCCEEEECCccccCCHHHHHHHHcCC---
Confidence 1 11111 111 244442 677899999999999999999999999999999999954
Q ss_pred CCCCCCCCCCCCCceEEecCCcccccccCC---------------------ceeeCCCCHHHHHHHHHHHHcCCHHHHHH
Q 003025 461 GSESSSESSAPKKSMLVVSEFIGCSPSLSG---------------------AIRVNPWNIEATAEAMHEAIQMNEAEKQL 519 (856)
Q Consensus 461 ~~~~~~~~~~~~~g~lV~Se~~G~~~~l~~---------------------al~VnP~d~~~~A~ai~~aL~m~~~er~~ 519 (856)
|+|+|..+|..+..++ |+.++++|++++|++|.+++.+.+.+ +
T Consensus 249 --------------PVVas~~~~l~Ei~g~~~~~Li~~~~v~~~~~~~~g~g~~~~~~d~~~la~ai~~~~~~~~~~--~ 312 (335)
T PHA01633 249 --------------PVIHQLMPPLDEFTSWQWNLLIKSSKVEEYYDKEHGQKWKIHKFQIEDMANAIILAFELQDRE--E 312 (335)
T ss_pred --------------CEEEccCCCceeecCCccceeeCCCCHHHhcCcccCceeeecCCCHHHHHHHHHHHHhccChh--h
Confidence 9999988877765331 45778899999999999998876433 3
Q ss_pred HHHHHhhhhhcCCHHHHHHHHH
Q 003025 520 RHEKHYRYVSTHDVAYWARSFF 541 (856)
Q Consensus 520 r~~~~~~~v~~~~~~~W~~~~l 541 (856)
|..+.++..+++++..-+++|+
T Consensus 313 ~~~~~~~~a~~f~~~~~~~~~~ 334 (335)
T PHA01633 313 RSMKLKELAKKYDIRNLYTRFL 334 (335)
T ss_pred hhHHHHHHHHhcCHHHHHHHhh
Confidence 3445678888898888877765
|
|
| >cd03820 GT1_amsD_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.78 E-value=2.3e-18 Score=188.27 Aligned_cols=264 Identities=16% Similarity=0.148 Sum_probs=180.1
Q ss_pred HHcCCCCCEEEEeCcccchHHHHHHhhcCCCeEEEEEccCCCChHHHhcCCchHHHHHHhHhCCEEcccCHHHHHHHHHH
Q 003025 195 EVINPEDDYVWIHDYHLMVLPTFLRRRFTRLRMGFFLHSPFPSSEIYRTLPVREEILKALLNADLIGFHTFDYARHFLSC 274 (856)
Q Consensus 195 ~~~~~~~D~VwihDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~~~~lp~r~eil~~ll~~dligf~t~~~~~~Fl~~ 274 (856)
+..+| |+|++|+.+...+...+... ..++.+..|..++....... +.......+-.+|.+-+.+......+.
T Consensus 80 ~~~~~--d~i~~~~~~~~~~~~~~~~~--~~~~i~~~~~~~~~~~~~~~--~~~~~~~~~~~~d~ii~~s~~~~~~~~-- 151 (348)
T cd03820 80 KNNKP--DVVISFLTSLLTFLASLGLK--IVKLIVSEHNSPDAYKKRLR--RLLLRRLLYRRADAVVVLTEEDRALYY-- 151 (348)
T ss_pred cccCC--CEEEEcCchHHHHHHHHhhc--cccEEEecCCCccchhhhhH--HHHHHHHHHhcCCEEEEeCHHHHHHhh--
Confidence 33455 99999998822222222221 14888888977654332210 110122234457777776654431000
Q ss_pred HHhhhCceecccCceeeEEECCEEEEEEEeecccCchHHHHHhcCchHHHHHHHHHHHcCCCeEEEeccCccccCCHHHH
Q 003025 275 CSRMLGLEYQSKRGYIGLEYYGRTVGIKIMPVGIHMGQIESVLRLADKDWRVQELKQQFEGKTVLLGVDDMDIFKGVDLK 354 (856)
Q Consensus 275 ~~r~lg~~~~~~~~~~~~~~~gr~~~i~i~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~k~iil~VdRld~~KGi~~~ 354 (856)
.....++.++|+|++...+... ...+++.++++||+.+.||+..+
T Consensus 152 --------------------~~~~~~~~vi~~~~~~~~~~~~---------------~~~~~~~i~~~g~~~~~K~~~~l 196 (348)
T cd03820 152 --------------------KKFNKNVVVIPNPLPFPPEEPS---------------SDLKSKRILAVGRLVPQKGFDLL 196 (348)
T ss_pred --------------------ccCCCCeEEecCCcChhhcccc---------------CCCCCcEEEEEEeeccccCHHHH
Confidence 1112356778999997754311 12467889999999999999999
Q ss_pred HHHHHHHHHhCCCCcCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCcccEEEEcCCCCHHHHHHHHHhcc
Q 003025 355 LLAMEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDKPVTLSERAAYYTIAE 434 (856)
Q Consensus 355 l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~~~~lv~~IN~~~~~~~~~pvv~~~~~v~~~el~aly~~AD 434 (856)
++|++++.+.+|+++ |+.+|. +++...+++ ++.+. +..+.+.+.+. .+++..+|+.||
T Consensus 197 ~~~~~~l~~~~~~~~----l~i~G~-----~~~~~~~~~----~~~~~-------~~~~~v~~~g~--~~~~~~~~~~ad 254 (348)
T cd03820 197 IEAWAKIAKKHPDWK----LRIVGD-----GPEREALEA----LIKEL-------GLEDRVILLGF--TKNIEEYYAKAS 254 (348)
T ss_pred HHHHHHHHhcCCCeE----EEEEeC-----CCCHHHHHH----HHHHc-------CCCCeEEEcCC--cchHHHHHHhCC
Confidence 999999988888754 777763 233333333 33332 33455666665 689999999999
Q ss_pred eeeeccccccCCCcccceeeeecCCCCCCCCCCCCCCCCceEEecCCccccccc-C---CceeeCCCCHHHHHHHHHHHH
Q 003025 435 CVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIGCSPSL-S---GAIRVNPWNIEATAEAMHEAI 510 (856)
Q Consensus 435 v~vvtS~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l-~---~al~VnP~d~~~~A~ai~~aL 510 (856)
++++||..||||++++|||+|+. |+|+|+..|..+.+ . .|+++++.|+++++++|.+++
T Consensus 255 ~~i~ps~~e~~~~~~~Ea~a~G~-----------------Pvi~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~ll 317 (348)
T cd03820 255 IFVLTSRFEGFPMVLLEAMAFGL-----------------PVISFDCPTGPSEIIEDGVNGLLVPNGDVEALAEALLRLM 317 (348)
T ss_pred EEEeCccccccCHHHHHHHHcCC-----------------CEEEecCCCchHhhhccCcceEEeCCCCHHHHHHHHHHHH
Confidence 99999999999999999999955 99999876655444 2 589999999999999999999
Q ss_pred cCCHHHHHHHHHHHhhhhhcCCHHHHHHHHH
Q 003025 511 QMNEAEKQLRHEKHYRYVSTHDVAYWARSFF 541 (856)
Q Consensus 511 ~m~~~er~~r~~~~~~~v~~~~~~~W~~~~l 541 (856)
+.+ +.++...++.++.++.+++..++++|.
T Consensus 318 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 347 (348)
T cd03820 318 EDE-ELRKRMGANARESAERFSIENIIKQWE 347 (348)
T ss_pred cCH-HHHHHHHHHHHHHHHHhCHHHHHHHhc
Confidence 844 444455555677888888888887764
|
AmSD in Erwinia amylovora has been shown to be involved in the biosynthesis of amylovoran, the acidic exopolysaccharide acting as a virulence factor. This enzyme may be responsible for the formation of galactose alpha-1,6 linkages in amylovoran. |
| >TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase | Back alignment and domain information |
|---|
Probab=99.78 E-value=4.5e-18 Score=178.07 Aligned_cols=190 Identities=15% Similarity=0.111 Sum_probs=116.7
Q ss_pred EEEEecCCCCCCCCCCCCCCCHHHHHHHHHHHhhCCCeEEEecCCChhhHHHhhcCCC-CccEEeeCCEEEEeCCCc---
Q 003025 593 AILFDYDGTVMPQTSINKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSPCK-KLGIAAEHGYFMRWSADE--- 668 (856)
Q Consensus 593 lI~~DlDGTLl~~~~~~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~~~-~lgliaenG~~I~~~~~~--- 668 (856)
+|++|+||||++ .+. ++++++++|++| ++.|+.|+++|||++..+..++..+. ..++|++||+.|..+...
T Consensus 1 li~~DlDGTLl~---~~~-~~~~~~~ai~~l-~~~G~~~vi~TgR~~~~~~~~~~~lg~~~~~I~~NGa~I~~~~~~~~~ 75 (225)
T TIGR02461 1 VIFTDLDGTLLP---PGY-EPGPAREALEEL-KDLGFPIVFVSSKTRAEQEYYREELGVEPPFIVENGGAIFIPRGYFPF 75 (225)
T ss_pred CEEEeCCCCCcC---CCC-CchHHHHHHHHH-HHCCCEEEEEeCCCHHHHHHHHHHcCCCCcEEEcCCcEEEecCccccc
Confidence 589999999998 433 556799999997 77899999999999999999886654 346899999999875421
Q ss_pred ------------ceEecCCCCcccHHHHHHHHHHHHhhcCCcceEEe---c----ccceEEe---eec-CC-CCCCchhH
Q 003025 669 ------------EWQNCGQSVDFGWIQIAEPVMKLYTESTDGSYIEI---K----ESALVWH---HRD-AD-PGFGSSQA 724 (856)
Q Consensus 669 ------------~w~~~~~~~~~~w~~~v~~i~~~~~~~~~Gs~ie~---k----~~~l~~~---~~~-~d-p~~~~~~a 724 (856)
.+.... + .+.++++++...+..+-.+... . ...+... ... .+ .+......
T Consensus 76 ~~~~~~~~~~~~i~~~~l---~---~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ki~~~~~ 149 (225)
T TIGR02461 76 PVGAGREVGNYEVIELGK---P---VAKIRAALKEAENEYGLKYYGNSTAEEVEKLTGLPRELAPLAKRREYSETIFLWS 149 (225)
T ss_pred cccccccCCCeEEEEcCC---C---HHHHHHHHHHHHHhcCccchhcCCHHHHHHHHCcCHHHHHHHHhhhcCCcccCCC
Confidence 122211 1 1223333332222111000000 0 0000000 000 00 00000001
Q ss_pred HHHHHHHHHHhcCCCeEEEEcCeEEEEEeCCCCHHHHHHHHHHHhhhcCC--CcceEEEEeCCchhHHHHHHccc
Q 003025 725 KELLDHLESVLANEPAAVKSGQFIVEVKPQGVSKGVVAEKIFTTMAESGR--HADFVLCIGDDRSDEDMFEIIGN 797 (856)
Q Consensus 725 ~el~~~L~~~l~~~~~~v~~g~~~vEI~p~gvsKG~al~~Ll~~l~~~gi--~~d~vlaiGD~~ND~~Mf~~ag~ 797 (856)
++....+.+.+....+.+..+..++++. .++|||.|++.+++.+ ++ +.+++++|||+.||++||+.+|.
T Consensus 150 ~e~~~~~~~~~~~~~~~~~~s~~~~~i~-~~~sK~~al~~l~~~~---~~~~~~~~~i~~GD~~nD~~ml~~ag~ 220 (225)
T TIGR02461 150 REGWEAILVTARARGLKYTHGGRFYTVH-GGSDKGKAIKRLLDLY---KLRPGAIESVGLGDSENDFPMFEVVDL 220 (225)
T ss_pred HHHHHHHHHHHHHcCCcEEECCEEEEEC-CCCCHHHHHHHHHHHh---ccccCcccEEEEcCCHHHHHHHHhCCC
Confidence 1222222222233445666677778864 5999999999999988 66 56689999999999999999995
|
Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles. |
| >PRK09922 UDP-D-galactose:(glucosyl)lipopolysaccharide-1,6-D-galactosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.77 E-value=1.2e-17 Score=187.70 Aligned_cols=240 Identities=15% Similarity=0.129 Sum_probs=165.2
Q ss_pred HHHHHcCCCCCEEEEeCcccchHHHHHHhhc-CCCeEEEEEccCCCChHHHhcCCchHHHHHHhHhCCEEcccCHHHHHH
Q 003025 192 RVIEVINPEDDYVWIHDYHLMVLPTFLRRRF-TRLRMGFFLHSPFPSSEIYRTLPVREEILKALLNADLIGFHTFDYARH 270 (856)
Q Consensus 192 ~i~~~~~~~~D~VwihDyhl~llp~~lr~~~-~~~~i~~flH~PfP~~e~~~~lp~r~eil~~ll~~dligf~t~~~~~~ 270 (856)
++++..+| |+|++|+.....+..++++.. ...++..+.|..++....+. ...+..+|.+-..+..-.+.
T Consensus 78 ~~l~~~~~--Dii~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~--------~~~~~~~d~~i~~S~~~~~~ 147 (359)
T PRK09922 78 KWLKETQP--DIVICIDVISCLYANKARKKSGKQFKIFSWPHFSLDHKKHAE--------CKKITCADYHLAISSGIKEQ 147 (359)
T ss_pred HHHHhcCC--CEEEEcCHHHHHHHHHHHHHhCCCCeEEEEecCcccccchhh--------hhhhhcCCEEEEcCHHHHHH
Confidence 45566677 899999987776666666543 23456666776554332211 11234678877776554444
Q ss_pred HHHHHHhhhCceecccCceeeEEECCEEEEEEEeecccCchHHHHHhcCchHHHHHHHHHHHcCCCeEEEeccCcc--cc
Q 003025 271 FLSCCSRMLGLEYQSKRGYIGLEYYGRTVGIKIMPVGIHMGQIESVLRLADKDWRVQELKQQFEGKTVLLGVDDMD--IF 348 (856)
Q Consensus 271 Fl~~~~r~lg~~~~~~~~~~~~~~~gr~~~i~i~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~k~iil~VdRld--~~ 348 (856)
+.. .|+. ..++.++|+|||.+.+.. ..+ ...++++++++||+. ..
T Consensus 148 ~~~-----~~~~---------------~~ki~vi~N~id~~~~~~--~~~-----------~~~~~~~i~~~Grl~~~~~ 194 (359)
T PRK09922 148 MMA-----RGIS---------------AQRISVIYNPVEIKTIII--PPP-----------ERDKPAVFLYVGRLKFEGQ 194 (359)
T ss_pred HHH-----cCCC---------------HHHEEEEcCCCCHHHccC--CCc-----------ccCCCcEEEEEEEEecccC
Confidence 332 1221 124566899999765421 100 013467899999996 45
Q ss_pred CCHHHHHHHHHHHHHhCCCCcCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCcccEEEEcCCC--CHHHH
Q 003025 349 KGVDLKLLAMEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDKPV--TLSER 426 (856)
Q Consensus 349 KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~~~~lv~~IN~~~~~~~~~pvv~~~~~v--~~~el 426 (856)
||+..+++|+.++. + ++.|+++|. |++.+++ ++++++. +..+.+.|.|.+ +.+++
T Consensus 195 k~~~~l~~a~~~~~---~----~~~l~ivG~-----g~~~~~l----~~~~~~~-------~l~~~v~f~G~~~~~~~~~ 251 (359)
T PRK09922 195 KNVKELFDGLSQTT---G----EWQLHIIGD-----GSDFEKC----KAYSREL-------GIEQRIIWHGWQSQPWEVV 251 (359)
T ss_pred cCHHHHHHHHHhhC---C----CeEEEEEeC-----CccHHHH----HHHHHHc-------CCCCeEEEecccCCcHHHH
Confidence 99999999998762 2 456888874 4444444 4444443 233355666655 45899
Q ss_pred HHHHHhcceeeeccccccCCCcccceeeeecCCCCCCCCCCCCCCCCceEEecC-CcccccccC---CceeeCCCCHHHH
Q 003025 427 AAYYTIAECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSE-FIGCSPSLS---GAIRVNPWNIEAT 502 (856)
Q Consensus 427 ~aly~~ADv~vvtS~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~g~lV~Se-~~G~~~~l~---~al~VnP~d~~~~ 502 (856)
..+|+.||++|+||..||||++++|||||+. |+|+|+ .+|+.+.+. .|++|+|.|++++
T Consensus 252 ~~~~~~~d~~v~~s~~Egf~~~~lEAma~G~-----------------Pvv~s~~~~g~~eiv~~~~~G~lv~~~d~~~l 314 (359)
T PRK09922 252 QQKIKNVSALLLTSKFEGFPMTLLEAMSYGI-----------------PCISSDCMSGPRDIIKPGLNGELYTPGNIDEF 314 (359)
T ss_pred HHHHhcCcEEEECCcccCcChHHHHHHHcCC-----------------CEEEeCCCCChHHHccCCCceEEECCCCHHHH
Confidence 9999999999999999999999999999955 999999 888888773 3899999999999
Q ss_pred HHHHHHHHcCCH
Q 003025 503 AEAMHEAIQMNE 514 (856)
Q Consensus 503 A~ai~~aL~m~~ 514 (856)
|++|.+.++.++
T Consensus 315 a~~i~~l~~~~~ 326 (359)
T PRK09922 315 VGKLNKVISGEV 326 (359)
T ss_pred HHHHHHHHhCcc
Confidence 999999998664
|
|
| >cd03823 GT1_ExpE7_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.77 E-value=4.1e-17 Score=180.16 Aligned_cols=263 Identities=19% Similarity=0.187 Sum_probs=179.6
Q ss_pred HHHHHHcCCCCCEEEEeCcccchHHHHHHhhcCCCeEEEEEccCCCChHHHhcCCchHHHHHHhHhCCEEcccCHHHHHH
Q 003025 191 QRVIEVINPEDDYVWIHDYHLMVLPTFLRRRFTRLRMGFFLHSPFPSSEIYRTLPVREEILKALLNADLIGFHTFDYARH 270 (856)
Q Consensus 191 ~~i~~~~~~~~D~VwihDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~~~~lp~r~eil~~ll~~dligf~t~~~~~~ 270 (856)
.++++..+| |+|++|.+..+.++.+...+..++++.+++|-.++....... +.. ..|.+-..+....+.
T Consensus 89 ~~~~~~~~~--dii~~~~~~~~~~~~~~~~~~~~~~~i~~~hd~~~~~~~~~~------~~~---~~d~ii~~s~~~~~~ 157 (359)
T cd03823 89 ARLLEDFRP--DVVHFHHLQGLGVSILRAARDRGIPIVLTLHDYWLICPRQGL------FKK---GGDAVIAPSRFLLDR 157 (359)
T ss_pred HHHHHHcCC--CEEEECCccchHHHHHHHHHhcCCCEEEEEeeeeeecchhhh------hcc---CCCEEEEeCHHHHHH
Confidence 344555566 899999886554444333334468999999976543221111 111 127777777655554
Q ss_pred HHHHHHhhhCceecccCceeeEEECCEEEEEEEeecccCchHHHHHhcCchHHHHHHHHHHHcCCCeEEEeccCccccCC
Q 003025 271 FLSCCSRMLGLEYQSKRGYIGLEYYGRTVGIKIMPVGIHMGQIESVLRLADKDWRVQELKQQFEGKTVLLGVDDMDIFKG 350 (856)
Q Consensus 271 Fl~~~~r~lg~~~~~~~~~~~~~~~gr~~~i~i~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~k~iil~VdRld~~KG 350 (856)
|.. .+ ....++.++|+|+|...+..... ....++.+++++||+.+.||
T Consensus 158 ~~~-----~~---------------~~~~~~~vi~n~~~~~~~~~~~~------------~~~~~~~~i~~~G~~~~~k~ 205 (359)
T cd03823 158 YVA-----NG---------------LFAEKISVIRNGIDLDRAKRPRR------------APPGGRLRFGFIGQLTPHKG 205 (359)
T ss_pred HHH-----cC---------------CCccceEEecCCcChhhcccccc------------CCCCCceEEEEEecCccccC
Confidence 443 01 01236778999999877642110 11246788999999999999
Q ss_pred HHHHHHHHHHHHHhCCCCcCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCcccEEEEcCCCCHHHHHHHH
Q 003025 351 VDLKLLAMEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDKPVTLSERAAYY 430 (856)
Q Consensus 351 i~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~~~~lv~~IN~~~~~~~~~pvv~~~~~v~~~el~aly 430 (856)
+..+++|+..+.+ ++ +.|+.+|... .....+... +..+.+.+.+.++.+++..+|
T Consensus 206 ~~~li~~~~~l~~--~~----~~l~i~G~~~-----~~~~~~~~~--------------~~~~~v~~~g~~~~~~~~~~~ 260 (359)
T cd03823 206 VDLLLEAFKRLPR--GD----IELVIVGNGL-----ELEEESYEL--------------EGDPRVEFLGAYPQEEIDDFY 260 (359)
T ss_pred HHHHHHHHHHHHh--cC----cEEEEEcCch-----hhhHHHHhh--------------cCCCeEEEeCCCCHHHHHHHH
Confidence 9999999999876 44 4488777432 211111111 122356678899999999999
Q ss_pred Hhcceeeeccc-cccCCCcccceeeeecCCCCCCCCCCCCCCCCceEEecCCcccccccC---CceeeCCCCHHHHHHHH
Q 003025 431 TIAECVVVTAV-RDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIGCSPSLS---GAIRVNPWNIEATAEAM 506 (856)
Q Consensus 431 ~~ADv~vvtS~-~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~al~VnP~d~~~~A~ai 506 (856)
+.||++++||. .||++++++|||+|+. |+|+|+.+|..+.+. .|+++++.|+++++++|
T Consensus 261 ~~ad~~i~ps~~~e~~~~~~~Ea~a~G~-----------------Pvi~~~~~~~~e~i~~~~~g~~~~~~d~~~l~~~i 323 (359)
T cd03823 261 AEIDVLVVPSIWPENFPLVIREALAAGV-----------------PVIASDIGGMAELVRDGVNGLLFPPGDAEDLAAAL 323 (359)
T ss_pred HhCCEEEEcCcccCCCChHHHHHHHCCC-----------------CEEECCCCCHHHHhcCCCcEEEECCCCHHHHHHHH
Confidence 99999999997 7999999999999954 999999999888884 48999999999999999
Q ss_pred HHHHcCCHHHHHHHHHHHhhhhhcCCHHHHHHHHHH
Q 003025 507 HEAIQMNEAEKQLRHEKHYRYVSTHDVAYWARSFFQ 542 (856)
Q Consensus 507 ~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~~l~ 542 (856)
.++++ +++.++...++.++.+.. ..+++++++
T Consensus 324 ~~l~~-~~~~~~~~~~~~~~~~~~---~~~~~~~~~ 355 (359)
T cd03823 324 ERLID-DPDLLERLRAGIEPPRSI---EDQAEEYLK 355 (359)
T ss_pred HHHHh-ChHHHHHHHHhHHHhhhH---HHHHHHHHH
Confidence 99998 444455555555555443 444444443
|
ExpE7 in Sinorhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucans (exopolysaccharide II). |
| >PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=99.77 E-value=1.5e-17 Score=175.34 Aligned_cols=189 Identities=13% Similarity=0.067 Sum_probs=128.5
Q ss_pred cEEEEEecCCCCCCCCCCCCCCCHHHHHHHHHHHhhCCCeEEEecCCChhhHHHhhcCCC-CccEEeeCCEEEEeCCCcc
Q 003025 591 SRAILFDYDGTVMPQTSINKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSPCK-KLGIAAEHGYFMRWSADEE 669 (856)
Q Consensus 591 ~rlI~~DlDGTLl~~~~~~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~~~-~lgliaenG~~I~~~~~~~ 669 (856)
.|+||+|+||||++ ++..+++.++++|++| ++.|+.|+++|||+..++..++..+. ..++|++||+.|..+..
T Consensus 1 ~KLIftDLDGTLLd---~~~~~~~~a~~aL~~L-k~~GI~vVlaTGRt~~ev~~l~~~Lgl~~p~I~eNGA~I~~p~~-- 74 (302)
T PRK12702 1 MRLVLSSLDGSLLD---LEFNSYGAARQALAAL-ERRSIPLVLYSLRTRAQLEHLCRQLRLEHPFICEDGSAIYVPEH-- 74 (302)
T ss_pred CcEEEEeCCCCCcC---CCCcCCHHHHHHHHHH-HHCCCEEEEEcCCCHHHHHHHHHHhCCCCeEEEeCCcEEEEccc--
Confidence 48999999999999 6777889999999997 88899999999999999999987764 34799999999997644
Q ss_pred eEe-----------------cCCCCcccHHHHHHHHHHHHhhcCC--------------cceEE------ecccceEEee
Q 003025 670 WQN-----------------CGQSVDFGWIQIAEPVMKLYTESTD--------------GSYIE------IKESALVWHH 712 (856)
Q Consensus 670 w~~-----------------~~~~~~~~w~~~v~~i~~~~~~~~~--------------Gs~ie------~k~~~l~~~~ 712 (856)
|.. .....-..|+..+.++-+.+..... |.-.+ .++++-.+.+
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~~lg~~y~~ir~~L~~l~~~~~~~f~gF~d~t~~ei~~~TGL~~~~A~~A~~Re~SEp~~w 154 (302)
T PRK12702 75 YFPAGILDEQWQHRPPYYVCALGLPYPCLRHILQQVRQDSHLDLIGFGDWTASELAAATGIPLEEAERAQKREYSEIFSY 154 (302)
T ss_pred cccccccccccccCCCceEEecCCCHHHHHHHHHHHHHHhCCCceehhhCCHHHHHHHhCcCHHHHHHHHhccCCcceEe
Confidence 220 0000011233333333222211111 11111 1122222222
Q ss_pred ecCCCCCCchhHHHHHHHHHHHhcCCCeEEEEcCeEEEEEe------------------C---CCCHHHHHHHHHHHhhh
Q 003025 713 RDADPGFGSSQAKELLDHLESVLANEPAAVKSGQFIVEVKP------------------Q---GVSKGVVAEKIFTTMAE 771 (856)
Q Consensus 713 ~~~dp~~~~~~a~el~~~L~~~l~~~~~~v~~g~~~vEI~p------------------~---gvsKG~al~~Ll~~l~~ 771 (856)
... ...+ .+.+...++.+..|..|+.+.. . +++||.|+++|.+.+..
T Consensus 155 ~~~--------~~~~----~~~~~~~g~~~~~GgRf~H~l~~~~~~~~~~~~~~~~~~~~~~~~~dKg~A~~~L~~~y~~ 222 (302)
T PRK12702 155 SGD--------PARL----REAFAQQEANLTQHLLRLHQLHFSDLPQWYLTGWMQPTLAAEPNSLPGEQAVQLLLDCYQR 222 (302)
T ss_pred cCC--------HHHH----HHHHHHcCCeEEecCceEEecccccccccccccccccccccccCCCCHHHHHHHHHHHHHh
Confidence 211 1122 4455666788889999998886 5 99999999999999843
Q ss_pred cCCCcceEEEEeCCchhHHHHHHcccc
Q 003025 772 SGRHADFVLCIGDDRSDEDMFEIIGNA 798 (856)
Q Consensus 772 ~gi~~d~vlaiGD~~ND~~Mf~~ag~~ 798 (856)
.. ..=.++++|||.||++||+++...
T Consensus 223 ~~-~~~~tiaLGDspND~~mLe~~D~~ 248 (302)
T PRK12702 223 HL-GPIKALGIGCSPPDLAFLRWSEQK 248 (302)
T ss_pred cc-CCceEEEecCChhhHHHHHhCCee
Confidence 32 233899999999999999999863
|
|
| >PLN02846 digalactosyldiacylglycerol synthase | Back alignment and domain information |
|---|
Probab=99.77 E-value=1.1e-17 Score=190.62 Aligned_cols=270 Identities=13% Similarity=0.079 Sum_probs=169.5
Q ss_pred HHHHcCCCCCEEEEeCcccchH---HHHHHhhcCCCeEEEEEccCCCChHHHhcCCchHHHHHHhHhCCEEcccCHHHHH
Q 003025 193 VIEVINPEDDYVWIHDYHLMVL---PTFLRRRFTRLRMGFFLHSPFPSSEIYRTLPVREEILKALLNADLIGFHTFDYAR 269 (856)
Q Consensus 193 i~~~~~~~~D~VwihDyhl~ll---p~~lr~~~~~~~i~~flH~PfP~~e~~~~lp~r~eil~~ll~~dligf~t~~~~~ 269 (856)
+++..+| |+|++|+.-.+.. ...+++++ .. +..+.|+.|+.+--+--.......+...+ ..|++
T Consensus 111 ~l~~~~p--DVIHv~tP~~LG~~~~g~~~~~k~-~~-vV~tyHT~y~~Y~~~~~~g~~~~~l~~~~---------~~~~~ 177 (462)
T PLN02846 111 TIPDEEA--DIAVLEEPEHLTWYHHGKRWKTKF-RL-VIGIVHTNYLEYVKREKNGRVKAFLLKYI---------NSWVV 177 (462)
T ss_pred HHHhcCC--CEEEEcCchhhhhHHHHHHHHhcC-Cc-EEEEECCChHHHHHHhccchHHHHHHHHH---------HHHHH
Confidence 3455677 8999998776655 33444454 34 77799998764321110001112222111 12222
Q ss_pred HHHHHHHhhhCceecccCceeeEEECCEEEEEEEeecccCchHHHHHhcCchHHHHHHHHHHHc--CC--CeEEEeccCc
Q 003025 270 HFLSCCSRMLGLEYQSKRGYIGLEYYGRTVGIKIMPVGIHMGQIESVLRLADKDWRVQELKQQF--EG--KTVLLGVDDM 345 (856)
Q Consensus 270 ~Fl~~~~r~lg~~~~~~~~~~~~~~~gr~~~i~i~p~GId~~~~~~~~~~~~~~~~~~~l~~~~--~~--k~iil~VdRl 345 (856)
.| .|+.++..+....+ +... +...+.|||.+.|.+... . +++.+ .+ .+++++||||
T Consensus 178 r~--~~d~vi~pS~~~~~------l~~~---~i~~v~GVd~~~f~~~~~-----~----~~~~~~~~~~~~~~~l~vGRL 237 (462)
T PLN02846 178 DI--YCHKVIRLSAATQD------YPRS---IICNVHGVNPKFLEIGKL-----K----LEQQKNGEQAFTKGAYYIGKM 237 (462)
T ss_pred HH--hcCEEEccCHHHHH------HhhC---EEecCceechhhcCCCcc-----c----HhhhcCCCCCcceEEEEEecC
Confidence 22 14544444321111 1111 222357999988763211 0 11222 12 3579999999
Q ss_pred cccCCHHHHHHHHHHHHHhCCCCcCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCcccEEEEcCCCCHHH
Q 003025 346 DIFKGVDLKLLAMEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDKPVTLSE 425 (856)
Q Consensus 346 d~~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~~~~lv~~IN~~~~~~~~~pvv~~~~~v~~~e 425 (856)
.+.||+..+|+||.++.++.|+++ |+++| +|++.+++++.+.++ + .. ++++.|..+.+
T Consensus 238 ~~eK~~~~Li~a~~~l~~~~~~~~----l~ivG-----dGp~~~~L~~~a~~l----~-------l~-~~vf~G~~~~~- 295 (462)
T PLN02846 238 VWSKGYKELLKLLHKHQKELSGLE----VDLYG-----SGEDSDEVKAAAEKL----E-------LD-VRVYPGRDHAD- 295 (462)
T ss_pred cccCCHHHHHHHHHHHHhhCCCeE----EEEEC-----CCccHHHHHHHHHhc----C-------Cc-EEEECCCCCHH-
Confidence 999999999999999988888754 77665 677766665554443 2 22 33466655444
Q ss_pred HHHHHHhcceeeeccccccCCCcccceeeeecCCCCCCCCCCCCCCCCceEEecCCcccccccC---CceeeCCCCHHHH
Q 003025 426 RAAYYTIAECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIGCSPSLS---GAIRVNPWNIEAT 502 (856)
Q Consensus 426 l~aly~~ADv~vvtS~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~al~VnP~d~~~~ 502 (856)
++|+.+||||+||..||||+|.+|||||+. |+|+++..| .+.+. +|+.+ .|.+++
T Consensus 296 --~~~~~~DvFv~pS~~Et~g~v~lEAmA~G~-----------------PVVa~~~~~-~~~v~~~~ng~~~--~~~~~~ 353 (462)
T PLN02846 296 --PLFHDYKVFLNPSTTDVVCTTTAEALAMGK-----------------IVVCANHPS-NEFFKQFPNCRTY--DDGKGF 353 (462)
T ss_pred --HHHHhCCEEEECCCcccchHHHHHHHHcCC-----------------cEEEecCCC-cceeecCCceEec--CCHHHH
Confidence 689999999999999999999999999955 999999887 46662 36666 489999
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHhhhhhcCCHHHHHHHHHHHHH
Q 003025 503 AEAMHEAIQMNEAEKQLRHEKHYRYVSTHDVAYWARSFFQDME 545 (856)
Q Consensus 503 A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~l~ 545 (856)
+++|.++|+.++.+... +. ...+++..-+++|++.++
T Consensus 354 a~ai~~~l~~~~~~~~~---~a---~~~~SWe~~~~~l~~~~~ 390 (462)
T PLN02846 354 VRATLKALAEEPAPLTD---AQ---RHELSWEAATERFLRVAD 390 (462)
T ss_pred HHHHHHHHccCchhHHH---HH---HHhCCHHHHHHHHHHHhc
Confidence 99999999855433221 11 237788887887776554
|
|
| >cd03808 GT1_cap1E_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.76 E-value=4.9e-17 Score=178.55 Aligned_cols=278 Identities=17% Similarity=0.134 Sum_probs=189.6
Q ss_pred HHHHcCCCCCEEEEeCcccchHHHHHHhhcCCCeEEEEEccCCCChHHHhcC-CchHHH-HHHhHhCCEEcccCHHHHHH
Q 003025 193 VIEVINPEDDYVWIHDYHLMVLPTFLRRRFTRLRMGFFLHSPFPSSEIYRTL-PVREEI-LKALLNADLIGFHTFDYARH 270 (856)
Q Consensus 193 i~~~~~~~~D~VwihDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~~~~l-p~r~ei-l~~ll~~dligf~t~~~~~~ 270 (856)
+++..+| |+|++|..+..++..++.+.....++.+..|...+........ .....+ -..+-.+|.+.+.+....+.
T Consensus 75 ~~~~~~~--dvv~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~s~~~~~~ 152 (359)
T cd03808 75 LLRKERP--DIVHTHTPKPGILGRLAARLAGVPKVIYTVHGLGFVFTSGGLKRRLYLLLERLALRFTDKVIFQNEDDRDL 152 (359)
T ss_pred HHHhcCC--CEEEEccccchhHHHHHHHHcCCCCEEEEecCcchhhccchhHHHHHHHHHHHHHhhccEEEEcCHHHHHH
Confidence 3445566 8999998887777777766566677888888653321110000 000111 11233578888888777776
Q ss_pred HHHHHHhhhCceecccCceeeEEECCEEEEEEEeecccCchHHHHHhcCchHHHHHHHHHHHcCCCeEEEeccCccccCC
Q 003025 271 FLSCCSRMLGLEYQSKRGYIGLEYYGRTVGIKIMPVGIHMGQIESVLRLADKDWRVQELKQQFEGKTVLLGVDDMDIFKG 350 (856)
Q Consensus 271 Fl~~~~r~lg~~~~~~~~~~~~~~~gr~~~i~i~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~k~iil~VdRld~~KG 350 (856)
+.+. +.. .....+.+.|+|+|...+..... . ...++..++++||+.+.||
T Consensus 153 ~~~~-----~~~-------------~~~~~~~~~~~~~~~~~~~~~~~-----~-------~~~~~~~i~~~G~~~~~k~ 202 (359)
T cd03808 153 ALKL-----GII-------------KKKKTVLIPGSGVDLDRFSPSPE-----P-------IPEDDPVFLFVARLLKDKG 202 (359)
T ss_pred HHHh-----cCC-------------CcCceEEecCCCCChhhcCcccc-----c-------cCCCCcEEEEEeccccccC
Confidence 6541 100 01234566799999877642211 0 1246789999999999999
Q ss_pred HHHHHHHHHHHHHhCCCCcCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCcccEEEEcCCCCHHHHHHHH
Q 003025 351 VDLKLLAMEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDKPVTLSERAAYY 430 (856)
Q Consensus 351 i~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~~~~lv~~IN~~~~~~~~~pvv~~~~~v~~~el~aly 430 (856)
+..+++|++.+.+++|+++ |+.+|.... . ...... ++.+. +..+.+.+.+. .+++..+|
T Consensus 203 ~~~li~~~~~l~~~~~~~~----l~i~G~~~~---~--~~~~~~---~~~~~-------~~~~~v~~~g~--~~~~~~~~ 261 (359)
T cd03808 203 IDELLEAARILKAKGPNVR----LLLVGDGDE---E--NPAAIL---EIEKL-------GLEGRVEFLGF--RDDVPELL 261 (359)
T ss_pred HHHHHHHHHHHHhcCCCeE----EEEEcCCCc---c--hhhHHH---HHHhc-------CCcceEEEeec--cccHHHHH
Confidence 9999999999988787654 777775431 1 111111 12221 12234445555 67899999
Q ss_pred HhcceeeeccccccCCCcccceeeeecCCCCCCCCCCCCCCCCceEEecCCcccccccC---CceeeCCCCHHHHHHHHH
Q 003025 431 TIAECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIGCSPSLS---GAIRVNPWNIEATAEAMH 507 (856)
Q Consensus 431 ~~ADv~vvtS~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~al~VnP~d~~~~A~ai~ 507 (856)
+.||++++||..||+|++++|||+|+. |+|+|+.+|..+.+. .|+++++.|+++++++|.
T Consensus 262 ~~adi~i~ps~~e~~~~~~~Ea~~~G~-----------------Pvi~s~~~~~~~~i~~~~~g~~~~~~~~~~~~~~i~ 324 (359)
T cd03808 262 AAADVFVLPSYREGLPRVLLEAMAMGR-----------------PVIATDVPGCREAVIDGVNGFLVPPGDAEALADAIE 324 (359)
T ss_pred HhccEEEecCcccCcchHHHHHHHcCC-----------------CEEEecCCCchhhhhcCcceEEECCCCHHHHHHHHH
Confidence 999999999999999999999999955 999999999998884 389999999999999999
Q ss_pred HHHcCCHHHHHHHHHHHhhh-hhcCCHHHHHHHHH
Q 003025 508 EAIQMNEAEKQLRHEKHYRY-VSTHDVAYWARSFF 541 (856)
Q Consensus 508 ~aL~m~~~er~~r~~~~~~~-v~~~~~~~W~~~~l 541 (856)
+++..+ +.+....++.+++ ...++...+++.++
T Consensus 325 ~l~~~~-~~~~~~~~~~~~~~~~~~s~~~~~~~~~ 358 (359)
T cd03808 325 RLIEDP-ELRARMGQAARKRAEEEFDEEIVVKKLL 358 (359)
T ss_pred HHHhCH-HHHHHHHHHHHHHHHHhcCHHHHHHHhh
Confidence 988644 4444555566666 56788888887764
|
cap1E in Streptococcus pneumoniae is required for the synthesis of type 1 capsular polysaccharides. |
| >PF05116 S6PP: Sucrose-6F-phosphate phosphohydrolase; InterPro: IPR006380 This family of sequences represent sucrose phosphate phosphohydrolase (SPP) from plants and cyanobacteria [] | Back alignment and domain information |
|---|
Probab=99.75 E-value=3e-18 Score=181.88 Aligned_cols=193 Identities=20% Similarity=0.284 Sum_probs=121.4
Q ss_pred cEEEEEecCCCCCCCCCCCCCCCHHHHHHHHHHHhhCCCeEEEecCCChhhHHHhhcCCC---CccEEeeCCEEEEeCCC
Q 003025 591 SRAILFDYDGTVMPQTSINKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSPCK---KLGIAAEHGYFMRWSAD 667 (856)
Q Consensus 591 ~rlI~~DlDGTLl~~~~~~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~~~---~lgliaenG~~I~~~~~ 667 (856)
.++|++|+||||++ .+..-.++..+.++ ....+++.++++|||+..++.+.+...+ .-.+|+.+|..|+....
T Consensus 2 ~~ll~sDlD~Tl~~---~~~~~~~~l~~~l~-~~~~~~~~~v~~TGRs~~~~~~~~~~~~l~~Pd~~I~svGt~I~~~~~ 77 (247)
T PF05116_consen 2 PRLLASDLDGTLID---GDDEALARLEELLE-QQARPEILFVYVTGRSLESVLRLLREYNLPQPDYIITSVGTEIYYGEN 77 (247)
T ss_dssp SEEEEEETBTTTBH---CHHHHHHHHHHHHH-HHHCCGEEEEEE-SS-HHHHHHHHHHCT-EE-SEEEETTTTEEEESST
T ss_pred CEEEEEECCCCCcC---CCHHHHHHHHHHHH-HhhCCCceEEEECCCCHHHHHHHHHhCCCCCCCEEEecCCeEEEEcCC
Confidence 58999999999993 12222344455555 2357899999999999999998886532 23588999999988321
Q ss_pred ----cceEecCCCCcccHHH-HHHHHHHHHhhcCCcce----EEecccceEEeeecCCCCCCchhHHHHHHHHHHHhcCC
Q 003025 668 ----EEWQNCGQSVDFGWIQ-IAEPVMKLYTESTDGSY----IEIKESALVWHHRDADPGFGSSQAKELLDHLESVLANE 738 (856)
Q Consensus 668 ----~~w~~~~~~~~~~w~~-~v~~i~~~~~~~~~Gs~----ie~k~~~l~~~~~~~dp~~~~~~a~el~~~L~~~l~~~ 738 (856)
..|...+ ...|.. .+.+++ ...++.. .+.....+.+.+...+. ...++.|+..+...
T Consensus 78 ~~~d~~w~~~i---~~~w~~~~v~~~l----~~~~~l~~q~~~~q~~~k~sy~~~~~~~-------~~~~~~i~~~l~~~ 143 (247)
T PF05116_consen 78 WQPDEEWQAHI---DERWDRERVEEIL----AELPGLRPQPESEQRPFKISYYVDPDDS-------ADILEEIRARLRQR 143 (247)
T ss_dssp TEE-HHHHHHH---HTT--HHHHHHHH----HCHCCEEEGGCCCGCCTCECEEEETTSH-------CHHHHHHHHHHHCC
T ss_pred CcChHHHHHHH---HhcCChHHHHHHH----HHhhCcccCCccccCCeeEEEEEecccc-------hhHHHHHHHHHHHc
Confidence 1232211 112332 222233 3333322 22233445555443221 23344555555444
Q ss_pred C---eEEEEcCeEEEEEeCCCCHHHHHHHHHHHhhhcCCCcceEEEEeCCchhHHHHHHccccccCCCCCCCccEEEEEe
Q 003025 739 P---AAVKSGQFIVEVKPQGVSKGVVAEKIFTTMAESGRHADFVLCIGDDRSDEDMFEIIGNATSSGVLSSNASVFACTV 815 (856)
Q Consensus 739 ~---~~v~~g~~~vEI~p~gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~v 815 (856)
. ..+.++..+++|.|+++|||.|+++|++++ ++++++|+++|||.||++||.... .+|.|
T Consensus 144 ~l~~~~i~s~~~~ldilP~~a~K~~Al~~L~~~~---~~~~~~vl~aGDSgND~~mL~~~~--------------~~vvV 206 (247)
T PF05116_consen 144 GLRVNVIYSNGRDLDILPKGASKGAALRYLMERW---GIPPEQVLVAGDSGNDLEMLEGGD--------------HGVVV 206 (247)
T ss_dssp TCEEEEEECTCCEEEEEETT-SHHHHHHHHHHHH---T--GGGEEEEESSGGGHHHHCCSS--------------EEEE-
T ss_pred CCCeeEEEccceeEEEccCCCCHHHHHHHHHHHh---CCCHHHEEEEeCCCCcHHHHcCcC--------------CEEEE
Confidence 3 245578899999999999999999999999 999999999999999999995443 57899
Q ss_pred CCC
Q 003025 816 GQK 818 (856)
Q Consensus 816 G~~ 818 (856)
||+
T Consensus 207 ~Na 209 (247)
T PF05116_consen 207 GNA 209 (247)
T ss_dssp TTS
T ss_pred cCC
Confidence 986
|
SPP is a member of the Class IIB subfamily of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. SPP catalyzes the final step in the biosynthesis of sucrose, a critically important molecule for plants. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.; PDB: 1TJ5_A 2B1Q_A 1TJ4_A 1S2O_A 1U2T_A 2D2V_A 1TJ3_A 1U2S_A 2B1R_A 3GYG_B .... |
| >cd03816 GT1_ALG1_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.75 E-value=6.4e-17 Score=185.31 Aligned_cols=164 Identities=11% Similarity=0.084 Sum_probs=125.7
Q ss_pred CCeEEEeccCccccCCHHHHHHHHHHHHHh------CCCCcCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCC
Q 003025 335 GKTVLLGVDDMDIFKGVDLKLLAMEHLLKQ------HPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGR 408 (856)
Q Consensus 335 ~k~iil~VdRld~~KGi~~~l~A~~~ll~~------~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~~~~lv~~IN~~~~~ 408 (856)
+..++++++|+.+.||+..+++|+..+.+. +|+ +.|+++|. |+..+++++.++++
T Consensus 231 ~~~vi~~~grl~~~K~~~~li~A~~~l~~~~~~~~~~~~----i~l~ivG~-----G~~~~~l~~~~~~~---------- 291 (415)
T cd03816 231 RPALLVSSTSWTPDEDFGILLDALVAYEKSAATGPKLPK----LLCIITGK-----GPLKEKYLERIKEL---------- 291 (415)
T ss_pred CceEEEEeccccCCCCHHHHHHHHHHHHHhhcccccCCC----EEEEEEec-----CccHHHHHHHHHHc----------
Confidence 356888999999999999999999998764 344 55888873 44444444444432
Q ss_pred CCcccEEEEcCCCCHHHHHHHHHhcceeeec---cccccCCCcccceeeeecCCCCCCCCCCCCCCCCceEEecCCcccc
Q 003025 409 PGYEPVVFIDKPVTLSERAAYYTIAECVVVT---AVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIGCS 485 (856)
Q Consensus 409 ~~~~pvv~~~~~v~~~el~aly~~ADv~vvt---S~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~ 485 (856)
+...++++.+.++.+++..+|++||++|++ +..+||+++.+|||||+. |+|+|..+|+.
T Consensus 292 -~l~~~~~~~g~~~~~~~~~~l~~aDv~v~~~~~~~~~~~p~~~~Eama~G~-----------------PVI~s~~~~~~ 353 (415)
T cd03816 292 -KLKKVTIRTPWLSAEDYPKLLASADLGVSLHTSSSGLDLPMKVVDMFGCGL-----------------PVCALDFKCID 353 (415)
T ss_pred -CCCcEEEEcCcCCHHHHHHHHHhCCEEEEccccccccCCcHHHHHHHHcCC-----------------CEEEeCCCCHH
Confidence 445688888889999999999999999864 335889999999999955 99999999988
Q ss_pred cccC---CceeeCCCCHHHHHHHHHHHHcCC--HHHHHHHHHHHhhhhhcCCHHHHHHHHH
Q 003025 486 PSLS---GAIRVNPWNIEATAEAMHEAIQMN--EAEKQLRHEKHYRYVSTHDVAYWARSFF 541 (856)
Q Consensus 486 ~~l~---~al~VnP~d~~~~A~ai~~aL~m~--~~er~~r~~~~~~~v~~~~~~~W~~~~l 541 (856)
+.+. +|++|+ |++++|++|.++++.+ +++++.+.++.+++.. .+|...+.
T Consensus 354 eiv~~~~~G~lv~--d~~~la~~i~~ll~~~~~~~~~~~m~~~~~~~~~----~~~~~~~~ 408 (415)
T cd03816 354 ELVKHGENGLVFG--DSEELAEQLIDLLSNFPNRGKLNSLKKGAQEESE----LRWDENWD 408 (415)
T ss_pred HHhcCCCCEEEEC--CHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHhhh----cCHHHHHH
Confidence 8883 488884 9999999999999872 5666666666666554 34555443
|
The yeast gene ALG1 has been shown to function as a mannosyltransferase that catalyzes the formation of dolichol pyrophosphate (Dol-PP)-GlcNAc2Man from GDP-Man and Dol-PP-Glc-NAc2, and participates in the formation of the lipid-linked precursor oligosaccharide for N-glycosylation. In humans ALG1 has been associated with the congenital disorders of glycosylation (CDG) designated as subtype CDG-Ik. |
| >PLN02501 digalactosyldiacylglycerol synthase | Back alignment and domain information |
|---|
Probab=99.75 E-value=3.3e-17 Score=188.76 Aligned_cols=319 Identities=12% Similarity=0.117 Sum_probs=185.9
Q ss_pred eeCChhhhhhHhhcccccccc--ccccccCCCCCCCCCCcChHhHHHHHHHHHHHHHHHHHHcCCCCCEEEEeCcccchH
Q 003025 137 AFLPPDILTKFYHGFCKQHLW--PLFHYMLPFSATHGGRFDRSLWEAYVSANKIFSQRVIEVINPEDDYVWIHDYHLMVL 214 (856)
Q Consensus 137 v~l~~~~~~~~y~gf~~~~lW--pl~H~~~~~~~~~~~~~~~~~w~~Y~~vN~~fa~~i~~~~~~~~D~VwihDyhl~ll 214 (856)
+|=++++++.|......+-.= |.|-.. ++| ++|..+.-. -.-+-... +.+...+| |+|++|..-.+..
T Consensus 379 ~F~~p~eQe~~ir~wl~~r~g~~~~~~i~--fYp---g~~~~~~~S-I~p~gdI~--~~L~~f~P--DVVHLatP~~LGw 448 (794)
T PLN02501 379 TFSSPEEQESYIRNWLEERIGFKADFKIS--FYP---GKFSKERRS-IIPAGDTS--QFIPSKDA--DIAILEEPEHLNW 448 (794)
T ss_pred ccCCHHHHHHHHHHHHHHhcCCCCCceEE--eec---chhccCCcc-ccchHHHH--HHhhccCC--CEEEECCchhhcc
Confidence 677888888877766532111 111111 222 344322111 11111111 12334456 8999997654433
Q ss_pred H---HHHHhhcCCCeEEEEEccCCCChHHHhcCCchHHHHHHhHhCCEEcccCHHHHHHHHHH--HHhhhCceecccCce
Q 003025 215 P---TFLRRRFTRLRMGFFLHSPFPSSEIYRTLPVREEILKALLNADLIGFHTFDYARHFLSC--CSRMLGLEYQSKRGY 289 (856)
Q Consensus 215 p---~~lr~~~~~~~i~~flH~PfP~~e~~~~lp~r~eil~~ll~~dligf~t~~~~~~Fl~~--~~r~lg~~~~~~~~~ 289 (856)
- ....+++. ++....|+.||.+--+.-+..-+.++. .++++|+.. |++++.++.....
T Consensus 449 ~~~Glr~ArKl~--PVVasyHTny~eYl~~y~~g~L~~~ll-------------k~l~~~v~r~hcD~VIaPS~atq~-- 511 (794)
T PLN02501 449 YHHGKRWTDKFN--HVVGVVHTNYLEYIKREKNGALQAFFV-------------KHINNWVTRAYCHKVLRLSAATQD-- 511 (794)
T ss_pred HHHHHHHHHHcC--CeEEEEeCCcHHHHhHhcchhHHHHHH-------------HHHHHHHHHhhCCEEEcCCHHHHH--
Confidence 3 23334443 699999999996433322222222111 133344433 6776665522211
Q ss_pred eeEEECCEEEEEEEeecccCchHHHHHhcCchHHHHHHHHHHHcCCCeEEEeccCccccCCHHHHHHHHHHHHHhCCCCc
Q 003025 290 IGLEYYGRTVGIKIMPVGIHMGQIESVLRLADKDWRVQELKQQFEGKTVLLGVDDMDIFKGVDLKLLAMEHLLKQHPKWQ 369 (856)
Q Consensus 290 ~~~~~~gr~~~i~i~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~k~iil~VdRld~~KGi~~~l~A~~~ll~~~p~~~ 369 (856)
+. +. .|.. ..|||++.|.+... .. ...++ ......+.+++||||.+.||+..+|+|+..+.++.|+++
T Consensus 512 ----L~-~~-vI~n-VnGVDte~F~P~~r---~~-~~r~l-gi~~~~kgiLfVGRLa~EKGld~LLeAla~L~~~~pnvr 579 (794)
T PLN02501 512 ----LP-KS-VICN-VHGVNPKFLKIGEK---VA-EEREL-GQQAFSKGAYFLGKMVWAKGYRELIDLLAKHKNELDGFN 579 (794)
T ss_pred ----hc-cc-ceee-cccccccccCCcch---hH-HHHhc-CCccccCceEEEEcccccCCHHHHHHHHHHHHhhCCCeE
Confidence 11 11 1111 15999998864321 11 11111 000122458999999999999999999999988888754
Q ss_pred CceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCcccEEEEcCCCCHHHHHHHHHhcceeeeccccccCCCcc
Q 003025 370 GRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDKPVTLSERAAYYTIAECVVVTAVRDGMNLTP 449 (856)
Q Consensus 370 ~~vvLvqi~~p~r~~~~~~~~l~~~~~~lv~~IN~~~~~~~~~pvv~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~ 449 (856)
|+++| +|++.+++++.+. +.+ . .+. |.+.. ++..++|+.+||||+||.+||||+|+
T Consensus 580 ----LvIVG-----DGP~reeLe~la~----eLg-------L-~V~-FLG~~--dd~~~lyasaDVFVlPS~sEgFGlVl 635 (794)
T PLN02501 580 ----LDVFG-----NGEDAHEVQRAAK----RLD-------L-NLN-FLKGR--DHADDSLHGYKVFINPSISDVLCTAT 635 (794)
T ss_pred ----EEEEc-----CCccHHHHHHHHH----HcC-------C-EEE-ecCCC--CCHHHHHHhCCEEEECCCcccchHHH
Confidence 77776 5566555544443 322 2 144 44443 33458999999999999999999999
Q ss_pred cceeeeecCCCCCCCCCCCCCCCCceEEecCCccccccc-C--CceeeCCCCHHHHHHHHHHHHcCCHHHHHHHHHHHhh
Q 003025 450 YEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIGCSPSL-S--GAIRVNPWNIEATAEAMHEAIQMNEAEKQLRHEKHYR 526 (856)
Q Consensus 450 ~Ea~a~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l-~--~al~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~ 526 (856)
+|||||+. |||+++..|... + . ++++ +.|.++++++|.++|..++. + ...+.
T Consensus 636 LEAMA~Gl-----------------PVVATd~pG~e~-V~~g~nGll--~~D~EafAeAI~~LLsd~~~-r-l~~~a--- 690 (794)
T PLN02501 636 AEALAMGK-----------------FVVCADHPSNEF-FRSFPNCLT--YKTSEDFVAKVKEALANEPQ-P-LTPEQ--- 690 (794)
T ss_pred HHHHHcCC-----------------CEEEecCCCCce-EeecCCeEe--cCCHHHHHHHHHHHHhCchh-h-hHHHH---
Confidence 99999955 999999988543 4 2 3443 47999999999999987652 2 22221
Q ss_pred hhhcCCHHHHHHHHHHHH
Q 003025 527 YVSTHDVAYWARSFFQDM 544 (856)
Q Consensus 527 ~v~~~~~~~W~~~~l~~l 544 (856)
...+++..-++++++..
T Consensus 691 -~~~~SWeAaadrLle~~ 707 (794)
T PLN02501 691 -RYNLSWEAATQRFMEYS 707 (794)
T ss_pred -HhhCCHHHHHHHHHHhh
Confidence 23667777777666543
|
|
| >cd03795 GT1_like_4 This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.74 E-value=1.3e-16 Score=177.34 Aligned_cols=258 Identities=17% Similarity=0.176 Sum_probs=174.3
Q ss_pred CEEEEeCcccchHHHHHHhhcCCCeEEEEEccCCCChHHHhcCCchHHH-HHHhHhCCEEcccCHHHHHHHHHHHHhhhC
Q 003025 202 DYVWIHDYHLMVLPTFLRRRFTRLRMGFFLHSPFPSSEIYRTLPVREEI-LKALLNADLIGFHTFDYARHFLSCCSRMLG 280 (856)
Q Consensus 202 D~VwihDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~~~~lp~r~ei-l~~ll~~dligf~t~~~~~~Fl~~~~r~lg 280 (856)
|+|++|+...+.....+... .+.+..+++|........+. .....+ -..+..||.|.+.+..+.+.+.. . +
T Consensus 85 Dii~~~~~~~~~~~~~~~~~-~~~~~i~~~h~~~~~~~~~~--~~~~~~~~~~~~~~d~vi~~s~~~~~~~~~----~-~ 156 (357)
T cd03795 85 DVIHLHFPNPLADLALLLLP-RKKPVVVHWHSDIVKQKLLL--KLYRPLQRRFLRRADAIVATSPNYAETSPV----L-R 156 (357)
T ss_pred CEEEEecCcchHHHHHHHhc-cCceEEEEEcChhhccchhh--hhhhHHHHHHHHhcCEEEeCcHHHHHHHHH----h-c
Confidence 89999986654332222222 56788899996432221110 111111 22455678887777665554432 0 0
Q ss_pred ceecccCceeeEEECCEEEEEEEeecccCchHHHHHhcCchHHHHHHHHHHHcCCCeEEEeccCccccCCHHHHHHHHHH
Q 003025 281 LEYQSKRGYIGLEYYGRTVGIKIMPVGIHMGQIESVLRLADKDWRVQELKQQFEGKTVLLGVDDMDIFKGVDLKLLAMEH 360 (856)
Q Consensus 281 ~~~~~~~~~~~~~~~gr~~~i~i~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~k~iil~VdRld~~KGi~~~l~A~~~ 360 (856)
....++.++|+|+|...+.... .. . ........++.+|+++||+.+.||+..+++|+++
T Consensus 157 ---------------~~~~~~~~i~~gi~~~~~~~~~---~~--~-~~~~~~~~~~~~i~~~G~~~~~K~~~~li~a~~~ 215 (357)
T cd03795 157 ---------------RFRDKVRVIPLGLDPARYPRPD---AL--E-EAIWRRAAGRPFFLFVGRLVYYKGLDVLLEAAAA 215 (357)
T ss_pred ---------------CCccceEEecCCCChhhcCCcc---hh--h-hHhhcCCCCCcEEEEecccccccCHHHHHHHHHh
Confidence 0113567789999988764211 10 0 1111122467899999999999999999999988
Q ss_pred HHHhCCCCcCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCcccEEEEcCCCCHHHHHHHHHhcceeeecc
Q 003025 361 LLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDKPVTLSERAAYYTIAECVVVTA 440 (856)
Q Consensus 361 ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~~~~lv~~IN~~~~~~~~~pvv~~~~~v~~~el~aly~~ADv~vvtS 440 (856)
+. ++.|+.+|. ++.... +.+++.+. +..+-+.+.|.++.+++..+|+.||++++||
T Consensus 216 l~--------~~~l~i~G~-----g~~~~~----~~~~~~~~-------~~~~~V~~~g~v~~~~~~~~~~~ad~~i~ps 271 (357)
T cd03795 216 LP--------DAPLVIVGE-----GPLEAE----LEALAAAL-------GLLDRVRFLGRLDDEEKAALLAACDVFVFPS 271 (357)
T ss_pred cc--------CcEEEEEeC-----ChhHHH----HHHHHHhc-------CCcceEEEcCCCCHHHHHHHHHhCCEEEeCC
Confidence 74 466887774 333333 33333222 3345667788999999999999999999999
Q ss_pred c--cccCCCcccceeeeecCCCCCCCCCCCCCCCCceEEecCCcccccccC----CceeeCCCCHHHHHHHHHHHHcCCH
Q 003025 441 V--RDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIGCSPSLS----GAIRVNPWNIEATAEAMHEAIQMNE 514 (856)
Q Consensus 441 ~--~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~----~al~VnP~d~~~~A~ai~~aL~m~~ 514 (856)
. .||+|++.+|||+|+. |+|+|+.+|..+.+. .|++++|.|+++++++|.++++. +
T Consensus 272 ~~~~e~~g~~~~Ea~~~g~-----------------Pvi~~~~~~~~~~i~~~~~~g~~~~~~d~~~~~~~i~~l~~~-~ 333 (357)
T cd03795 272 VERSEAFGIVLLEAMAFGK-----------------PVISTEIGTGGSYVNLHGVTGLVVPPGDPAALAEAIRRLLED-P 333 (357)
T ss_pred cccccccchHHHHHHHcCC-----------------CEEecCCCCchhHHhhCCCceEEeCCCCHHHHHHHHHHHHHC-H
Confidence 6 5999999999999955 999999999887763 38899999999999999999984 4
Q ss_pred HHHHHHHHHHhhhhhc
Q 003025 515 AEKQLRHEKHYRYVST 530 (856)
Q Consensus 515 ~er~~r~~~~~~~v~~ 530 (856)
++++...++.++++.+
T Consensus 334 ~~~~~~~~~~~~~~~~ 349 (357)
T cd03795 334 ELRERLGEAARERAEE 349 (357)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 5555556666666644
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP-linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog |
| >TIGR03087 stp1 sugar transferase, PEP-CTERM/EpsH1 system associated | Back alignment and domain information |
|---|
Probab=99.73 E-value=5.4e-16 Score=176.65 Aligned_cols=189 Identities=15% Similarity=0.136 Sum_probs=136.6
Q ss_pred EEEEeecccCchHHHHHhcCchHHHHHHHHHHHc-CCCeEEEeccCccccCCHHHHH----HHHHHHHHhCCCCcCceEE
Q 003025 300 GIKIMPVGIHMGQIESVLRLADKDWRVQELKQQF-EGKTVLLGVDDMDIFKGVDLKL----LAMEHLLKQHPKWQGRAVL 374 (856)
Q Consensus 300 ~i~i~p~GId~~~~~~~~~~~~~~~~~~~l~~~~-~~k~iil~VdRld~~KGi~~~l----~A~~~ll~~~p~~~~~vvL 374 (856)
++.++|+|||.+.|.+.... ...+ .++++|+++||+++.||+..++ .++..+.+++|+++ |
T Consensus 197 ~v~vipngvd~~~f~~~~~~----------~~~~~~~~~~ilf~G~l~~~k~~~~l~~~~~~~~~~l~~~~p~~~----l 262 (397)
T TIGR03087 197 RITAFPNGVDADFFSPDRDY----------PNPYPPGKRVLVFTGAMDYWPNIDAVVWFAERVFPAVRARRPAAE----F 262 (397)
T ss_pred CeEEeecccchhhcCCCccc----------cCCCCCCCcEEEEEEecCCccCHHHHHHHHHHHHHHHHHHCCCcE----E
Confidence 56778999999887532110 0111 3567899999999999999887 56667777888765 8
Q ss_pred EEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCcccEEEEcCCCCHHHHHHHHHhcceeeeccc-cccCCCccccee
Q 003025 375 VQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDKPVTLSERAAYYTIAECVVVTAV-RDGMNLTPYEYI 453 (856)
Q Consensus 375 vqi~~p~r~~~~~~~~l~~~~~~lv~~IN~~~~~~~~~pvv~~~~~v~~~el~aly~~ADv~vvtS~-~EG~nLv~~Ea~ 453 (856)
+++|. ++. . +++++.. .+-+.+.|.++ ++..+|+.||++|+||. .||++++.+|||
T Consensus 263 ~ivG~-----g~~-~----~~~~l~~-----------~~~V~~~G~v~--~~~~~~~~adv~v~Ps~~~eG~~~~~lEAm 319 (397)
T TIGR03087 263 YIVGA-----KPS-P----AVRALAA-----------LPGVTVTGSVA--DVRPYLAHAAVAVAPLRIARGIQNKVLEAM 319 (397)
T ss_pred EEECC-----CCh-H----HHHHhcc-----------CCCeEEeeecC--CHHHHHHhCCEEEecccccCCcccHHHHHH
Confidence 87774 222 1 2222211 12244667776 68999999999999996 699999999999
Q ss_pred eeecCCCCCCCCCCCCCCCCceEEecCCccccccc--CCceeeCCCCHHHHHHHHHHHHcCCHHHHHHHHHHHhhhh-hc
Q 003025 454 VCRQGVSGSESSSESSAPKKSMLVVSEFIGCSPSL--SGAIRVNPWNIEATAEAMHEAIQMNEAEKQLRHEKHYRYV-ST 530 (856)
Q Consensus 454 a~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l--~~al~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v-~~ 530 (856)
||+. |+|+|..++..... ..|+++. .|++++|++|.++++. ++.++...++.++++ ..
T Consensus 320 a~G~-----------------PVV~t~~~~~~i~~~~~~g~lv~-~~~~~la~ai~~ll~~-~~~~~~~~~~ar~~v~~~ 380 (397)
T TIGR03087 320 AMAK-----------------PVVASPEAAEGIDALPGAELLVA-ADPADFAAAILALLAN-PAEREELGQAARRRVLQH 380 (397)
T ss_pred HcCC-----------------CEEecCcccccccccCCcceEeC-CCHHHHHHHHHHHHcC-HHHHHHHHHHHHHHHHHh
Confidence 9955 99999864322111 2478885 8999999999999974 455666667778877 46
Q ss_pred CCHHHHHHHHHHHH
Q 003025 531 HDVAYWARSFFQDM 544 (856)
Q Consensus 531 ~~~~~W~~~~l~~l 544 (856)
+++...++++.+-+
T Consensus 381 fsw~~~~~~~~~~l 394 (397)
T TIGR03087 381 YHWPRNLARLDALL 394 (397)
T ss_pred CCHHHHHHHHHHHh
Confidence 89998888876654
|
Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate. |
| >cd03811 GT1_WabH_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.72 E-value=1.9e-16 Score=173.11 Aligned_cols=247 Identities=21% Similarity=0.164 Sum_probs=166.1
Q ss_pred HHcCCCCCEEEEeCc-ccchHHHHHHhhcCCCeEEEEEccCCCChHHHhcCCchHHHHHHhHhCCEEcccCHHHHHHHHH
Q 003025 195 EVINPEDDYVWIHDY-HLMVLPTFLRRRFTRLRMGFFLHSPFPSSEIYRTLPVREEILKALLNADLIGFHTFDYARHFLS 273 (856)
Q Consensus 195 ~~~~~~~D~VwihDy-hl~llp~~lr~~~~~~~i~~flH~PfP~~e~~~~lp~r~eil~~ll~~dligf~t~~~~~~Fl~ 273 (856)
+..++ |+|++|++ ...++. .+..+. +.++.+.+|..++...... .+........+..+|.+-+.+....+.+.+
T Consensus 78 ~~~~~--dii~~~~~~~~~~~~-~~~~~~-~~~~i~~~~~~~~~~~~~~-~~~~~~~~~~~~~~d~ii~~s~~~~~~~~~ 152 (353)
T cd03811 78 RKEKP--DVVISHLTTTPNVLA-LLAARL-GTKLIVWEHNSLSLELKRK-LRLLLLIRKLYRRADKIVAVSEGVKEDLLK 152 (353)
T ss_pred HhcCC--CEEEEcCccchhHHH-HHHhhc-CCceEEEEcCcchhhhccc-hhHHHHHHhhccccceEEEeccchhhhHHH
Confidence 33466 99999998 333443 344433 7899999998876532211 111112334455688888777665555543
Q ss_pred HHHhhhCceecccCceeeEEECCEEEEEEEeecccCchHHHHHhcCchHHHHHHHHHHHcCCCeEEEeccCccccCCHHH
Q 003025 274 CCSRMLGLEYQSKRGYIGLEYYGRTVGIKIMPVGIHMGQIESVLRLADKDWRVQELKQQFEGKTVLLGVDDMDIFKGVDL 353 (856)
Q Consensus 274 ~~~r~lg~~~~~~~~~~~~~~~gr~~~i~i~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~k~iil~VdRld~~KGi~~ 353 (856)
.. + ....++.++|+|+|...+...... .. ......++.+++++||+++.||+..
T Consensus 153 ~~----~---------------~~~~~~~vi~~~~~~~~~~~~~~~-----~~--~~~~~~~~~~i~~~g~~~~~k~~~~ 206 (353)
T cd03811 153 LL----G---------------IPPDKIEVIYNPIDIEEIRALAEE-----PL--ELGIPPDGPVILAVGRLSPQKGFDT 206 (353)
T ss_pred hh----c---------------CCccccEEecCCcChhhcCcccch-----hh--hcCCCCCceEEEEEecchhhcChHH
Confidence 11 1 012456778999998776532110 00 0011256789999999999999999
Q ss_pred HHHHHHHHHHhCCCCcCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCcccEEEEcCCCCHHHHHHHHHhc
Q 003025 354 KLLAMEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDKPVTLSERAAYYTIA 433 (856)
Q Consensus 354 ~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~~~~lv~~IN~~~~~~~~~pvv~~~~~v~~~el~aly~~A 433 (856)
.++|++.+.+++++++ |+.+|. ++...+++ +++.+.+ ..+.+.+.+.+ +++..+|+.|
T Consensus 207 ~i~~~~~l~~~~~~~~----l~i~G~-----~~~~~~~~----~~~~~~~-------~~~~v~~~g~~--~~~~~~~~~~ 264 (353)
T cd03811 207 LIRAFALLRKEGPDAR----LVILGD-----GPLREELE----ALAKELG-------LADRVHFLGFQ--SNPYPYLKAA 264 (353)
T ss_pred HHHHHHHhhhcCCCce----EEEEcC-----CccHHHHH----HHHHhcC-------CCccEEEeccc--CCHHHHHHhC
Confidence 9999999988776654 777774 23333333 3333332 23344555553 4688999999
Q ss_pred ceeeeccccccCCCcccceeeeecCCCCCCCCCCCCCCCCceEEecCCcccccccC---CceeeCCCCHHHHHHHHHHHH
Q 003025 434 ECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIGCSPSLS---GAIRVNPWNIEATAEAMHEAI 510 (856)
Q Consensus 434 Dv~vvtS~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~al~VnP~d~~~~A~ai~~aL 510 (856)
|+++.||..||+|++++|||+|+. |+|+|+.+|..+.+. .|+++++.|.+++++++..+.
T Consensus 265 d~~i~ps~~e~~~~~~~Ea~~~G~-----------------PvI~~~~~~~~e~i~~~~~g~~~~~~~~~~~~~~~~~i~ 327 (353)
T cd03811 265 DLFVLSSRYEGFPNVLLEAMALGT-----------------PVVATDCPGPREILEDGENGLLVPVGDEAALAAAALALL 327 (353)
T ss_pred CEEEeCcccCCCCcHHHHHHHhCC-----------------CEEEcCCCChHHHhcCCCceEEECCCCHHHHHHHHHHHH
Confidence 999999999999999999999955 999999999988883 489999999999954444444
Q ss_pred c
Q 003025 511 Q 511 (856)
Q Consensus 511 ~ 511 (856)
.
T Consensus 328 ~ 328 (353)
T cd03811 328 D 328 (353)
T ss_pred h
Confidence 3
|
WabH in Klebsiella pneumoniae has been shown to transfer a GlcNAc residue from UDP-GlcNAc onto the acceptor GalUA residue in the cellular outer core. |
| >PHA01630 putative group 1 glycosyl transferase | Back alignment and domain information |
|---|
Probab=99.71 E-value=2.5e-16 Score=174.39 Aligned_cols=186 Identities=13% Similarity=0.115 Sum_probs=136.3
Q ss_pred EEEEeecccCchHHHHHhcCchHHHHHHHHHHHcCCCeEEEeccCccccCCHHHHHHHHHHHHHhCCCCcCceEEEEEec
Q 003025 300 GIKIMPVGIHMGQIESVLRLADKDWRVQELKQQFEGKTVLLGVDDMDIFKGVDLKLLAMEHLLKQHPKWQGRAVLVQIAN 379 (856)
Q Consensus 300 ~i~i~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~k~iil~VdRld~~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~ 379 (856)
++.++|+|||.+.|.+... ...++.++++++|+.+.||+..+++|++++.+++|+++ |+.+|.
T Consensus 119 ~i~vIpNGVd~~~f~~~~~-------------~~~~~~vl~~~g~~~~~Kg~d~Li~A~~~l~~~~~~~~----llivG~ 181 (331)
T PHA01630 119 PIYVIPHNLNPRMFEYKPK-------------EKPHPCVLAILPHSWDRKGGDIVVKIFHELQNEGYDFY----FLIKSS 181 (331)
T ss_pred CEEEECCCCCHHHcCCCcc-------------ccCCCEEEEEeccccccCCHHHHHHHHHHHHhhCCCEE----EEEEeC
Confidence 5678899999887742110 01345567777899999999999999999998887654 777772
Q ss_pred CCCCCchhHHHHHHHHHHHHHHHhcccCCCCcccEEEEcCCCCHHHHHHHHHhcceeeeccccccCCCcccceeeeecCC
Q 003025 380 PARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDKPVTLSERAAYYTIAECVVVTAVRDGMNLTPYEYIVCRQGV 459 (856)
Q Consensus 380 p~r~~~~~~~~l~~~~~~lv~~IN~~~~~~~~~pvv~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~a~~~~~ 459 (856)
. .. +. ++. + + .+ +.+.++.+++..+|+.||+||+||..||||++++|||||+.
T Consensus 182 ~-----~~--~~--~l~------~--~--~~------~~~~v~~~~l~~~y~~aDv~v~pS~~E~fgl~~lEAMA~G~-- 234 (331)
T PHA01630 182 N-----ML--DP--RLF------G--L--NG------VKTPLPDDDIYSLFAGCDILFYPVRGGAFEIPVIEALALGL-- 234 (331)
T ss_pred c-----cc--ch--hhc------c--c--cc------eeccCCHHHHHHHHHhCCEEEECCccccCChHHHHHHHcCC--
Confidence 1 11 11 110 1 0 01 23468899999999999999999999999999999999955
Q ss_pred CCCCCCCCCCCCCCceEEecCCcccccccCC-----------------------ceeeCCCCHHHHHHHHHHHHcCC-HH
Q 003025 460 SGSESSSESSAPKKSMLVVSEFIGCSPSLSG-----------------------AIRVNPWNIEATAEAMHEAIQMN-EA 515 (856)
Q Consensus 460 ~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~~-----------------------al~VnP~d~~~~A~ai~~aL~m~-~~ 515 (856)
|+|+|+.+|..+.+.+ |++++| |.+++++++.++|..+ ++
T Consensus 235 ---------------PVIas~~gg~~E~i~~~~ng~lv~~~~~~~~~~~~~~~~G~~v~~-~~~~~~~~ii~~l~~~~~~ 298 (331)
T PHA01630 235 ---------------DVVVTEKGAWSEWVLSNLDVYWIKSGRKPKLWYTNPIHVGYFLDP-DIEDAYQKLLEALANWTPE 298 (331)
T ss_pred ---------------CEEEeCCCCchhhccCCCceEEeeecccccccccCCcccccccCC-CHHHHHHHHHHHHhCCCHH
Confidence 9999999888887732 444555 7888999999999764 23
Q ss_pred HHHHHH-HHHhhhhhcCCHHHHHHHHHHHHH
Q 003025 516 EKQLRH-EKHYRYVSTHDVAYWARSFFQDME 545 (856)
Q Consensus 516 er~~r~-~~~~~~v~~~~~~~W~~~~l~~l~ 545 (856)
+++.+. .......+.+++...++++++-++
T Consensus 299 ~~~~~~~~~~~~~~~~fs~~~ia~k~~~l~~ 329 (331)
T PHA01630 299 KKKENLEGRAILYRENYSYNAIAKMWEKILE 329 (331)
T ss_pred HHHHHHHHHHHHHHHhCCHHHHHHHHHHHHh
Confidence 333333 344556778999999998887764
|
|
| >cd03804 GT1_wbaZ_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.71 E-value=5e-16 Score=173.51 Aligned_cols=245 Identities=16% Similarity=0.156 Sum_probs=161.9
Q ss_pred CCEEEEeCcccchHHHHHHhhcCCCeEEEEEccCCC----ChHHH-hcCCc-------------hHHHHHHhHhCCEEcc
Q 003025 201 DDYVWIHDYHLMVLPTFLRRRFTRLRMGFFLHSPFP----SSEIY-RTLPV-------------REEILKALLNADLIGF 262 (856)
Q Consensus 201 ~D~VwihDyhl~llp~~lr~~~~~~~i~~flH~PfP----~~e~~-~~lp~-------------r~eil~~ll~~dligf 262 (856)
.|+|+++...+. ...+ +.++.+..+++|.|.+ ..+.+ ...+. +.-..+.+-.+|.|..
T Consensus 84 ~D~v~~~~~~~~--~~~~--~~~~~~~~~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~ 159 (351)
T cd03804 84 YDLVISSSHAVA--KGVI--TRPDQLHICYCHTPMRYAWDLYHDYLKESGLGKRLALRLLLHYLRIWDRRSAARVDYFIA 159 (351)
T ss_pred CCEEEEcCcHHh--cccc--CCCCCcEEEEeCCchHHHhcCchHhhhhcccchhhHHHHHHHHHHHHHHHHhcCCCEEEE
Confidence 489977643222 2222 4567888889998631 11111 11110 0011223456677776
Q ss_pred cCHHHHHHHHHHHHhhhCceecccCceeeEEECCEEEEEEEeecccCchHHHHHhcCchHHHHHHHHHHHcCCCeEEEec
Q 003025 263 HTFDYARHFLSCCSRMLGLEYQSKRGYIGLEYYGRTVGIKIMPVGIHMGQIESVLRLADKDWRVQELKQQFEGKTVLLGV 342 (856)
Q Consensus 263 ~t~~~~~~Fl~~~~r~lg~~~~~~~~~~~~~~~gr~~~i~i~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~k~iil~V 342 (856)
.+....+.+.+. . +. ...++|+|+|.+.|.... ..+++++++
T Consensus 160 ~S~~~~~~~~~~----~----------------~~--~~~vi~~~~d~~~~~~~~----------------~~~~~il~~ 201 (351)
T cd03804 160 NSRFVARRIKKY----Y----------------GR--DATVIYPPVDTDRFTPAE----------------EKEDYYLSV 201 (351)
T ss_pred CCHHHHHHHHHH----h----------------CC--CcEEECCCCCHhhcCcCC----------------CCCCEEEEE
Confidence 666555544321 1 11 124678999987764210 234579999
Q ss_pred cCccccCCHHHHHHHHHHHHHhCCCCcCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCcccEEEEcCCCC
Q 003025 343 DDMDIFKGVDLKLLAMEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDKPVT 422 (856)
Q Consensus 343 dRld~~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~~~~lv~~IN~~~~~~~~~pvv~~~~~v~ 422 (856)
||+.+.||+..+++|++++ | + .|+.+|. |++.+++++ . ..+.+.+.|.++
T Consensus 202 G~~~~~K~~~~li~a~~~~----~-~----~l~ivG~-----g~~~~~l~~-------~---------~~~~V~~~g~~~ 251 (351)
T cd03804 202 GRLVPYKRIDLAIEAFNKL----G-K----RLVVIGD-----GPELDRLRA-------K---------AGPNVTFLGRVS 251 (351)
T ss_pred EcCccccChHHHHHHHHHC----C-C----cEEEEEC-----ChhHHHHHh-------h---------cCCCEEEecCCC
Confidence 9999999999999999875 3 3 3777773 344333332 0 112455678999
Q ss_pred HHHHHHHHHhcceeeeccccccCCCcccceeeeecCCCCCCCCCCCCCCCCceEEecCCcccccccC---CceeeCCCCH
Q 003025 423 LSERAAYYTIAECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIGCSPSLS---GAIRVNPWNI 499 (856)
Q Consensus 423 ~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~al~VnP~d~ 499 (856)
.+++.++|+.||++++||. ||||++++|||+|+. |+|+|..+|..+.+. .|++++|.|+
T Consensus 252 ~~~~~~~~~~ad~~v~ps~-e~~g~~~~Eama~G~-----------------Pvi~~~~~~~~e~i~~~~~G~~~~~~~~ 313 (351)
T cd03804 252 DEELRDLYARARAFLFPAE-EDFGIVPVEAMASGT-----------------PVIAYGKGGALETVIDGVTGILFEEQTV 313 (351)
T ss_pred HHHHHHHHHhCCEEEECCc-CCCCchHHHHHHcCC-----------------CEEEeCCCCCcceeeCCCCEEEeCCCCH
Confidence 9999999999999999999 999999999999955 999999999888773 4899999999
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHhhhhhcCCHHHHHHH
Q 003025 500 EATAEAMHEAIQMNEAEKQLRHEKHYRYVSTHDVAYWARS 539 (856)
Q Consensus 500 ~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~ 539 (856)
+++|++|..+++.++.. .+.+++....+++.+..++
T Consensus 314 ~~la~~i~~l~~~~~~~----~~~~~~~~~~~~~~~~~~~ 349 (351)
T cd03804 314 ESLAAAVERFEKNEDFD----PQAIRAHAERFSESRFREK 349 (351)
T ss_pred HHHHHHHHHHHhCcccC----HHHHHHHHHhcCHHHHHHH
Confidence 99999999999876421 2233444455555555443
|
wbaZ in Salmonella enterica has been shown to possess the mannosyl transferase activity. The members of this family are found in certain bacteria and Archaea. |
| >cd04955 GT1_like_6 This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.71 E-value=9.1e-16 Score=171.05 Aligned_cols=267 Identities=14% Similarity=0.037 Sum_probs=171.9
Q ss_pred CEEEEeCcccchHHHHHHhhcCCCeEEEEEccCCCChHHHhcCCchHHHH-----HHhHhCCEEcccCHHHHHHHHHHHH
Q 003025 202 DYVWIHDYHLMVLPTFLRRRFTRLRMGFFLHSPFPSSEIYRTLPVREEIL-----KALLNADLIGFHTFDYARHFLSCCS 276 (856)
Q Consensus 202 D~VwihDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~~~~lp~r~eil-----~~ll~~dligf~t~~~~~~Fl~~~~ 276 (856)
|+++||.......+....-+..+.++.+.+|..-.....+.. ....++ ..+-.+|.|-..+....+.+..
T Consensus 86 ~~~~i~~~~~~~~~~~~~~~~~~~~~v~~~h~~~~~~~~~~~--~~~~~~~~~~~~~~~~ad~ii~~s~~~~~~~~~--- 160 (363)
T cd04955 86 DIDHVHALGPAIAPFLPLLRLKGKKVVVNMDGLEWKRAKWGR--PAKRYLKFGEKLAVKFADRLIADSPGIKEYLKE--- 160 (363)
T ss_pred CeEEEEecCccHHHHHHHHHhcCCCEEEEccCcceeeccccc--chhHHHHHHHHHHHhhccEEEeCCHHHHHHHHH---
Confidence 566666554443333222222378899988852111111110 011111 1344678887777544443322
Q ss_pred hhhCceecccCceeeEEECCEEEEEEEeecccCchHHHHHhcCchHHHHHHHHHHH--cCCCeEEEeccCccccCCHHHH
Q 003025 277 RMLGLEYQSKRGYIGLEYYGRTVGIKIMPVGIHMGQIESVLRLADKDWRVQELKQQ--FEGKTVLLGVDDMDIFKGVDLK 354 (856)
Q Consensus 277 r~lg~~~~~~~~~~~~~~~gr~~~i~i~p~GId~~~~~~~~~~~~~~~~~~~l~~~--~~~k~iil~VdRld~~KGi~~~ 354 (856)
..| ... .++|+|+|...+.. ....++. ...++.++++||+.+.||+..+
T Consensus 161 -~~~----------------~~~--~~i~ngv~~~~~~~----------~~~~~~~~~~~~~~~i~~~G~~~~~Kg~~~l 211 (363)
T cd04955 161 -KYG----------------RDS--TYIPYGADHVVSSE----------EDEILKKYGLEPGRYYLLVGRIVPENNIDDL 211 (363)
T ss_pred -hcC----------------CCC--eeeCCCcChhhcch----------hhhhHHhcCCCCCcEEEEEecccccCCHHHH
Confidence 111 111 57899999876532 0111222 2345678899999999999999
Q ss_pred HHHHHHHHHhCCCCcCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCcccEEEEcCCCCHHHHHHHHHhcc
Q 003025 355 LLAMEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDKPVTLSERAAYYTIAE 434 (856)
Q Consensus 355 l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~~~~lv~~IN~~~~~~~~~pvv~~~~~v~~~el~aly~~AD 434 (856)
++|+.++.. ++.|+.+|... +..++.+++.+. . +..+.+.+.|.++.+++..+|+.||
T Consensus 212 i~a~~~l~~-------~~~l~ivG~~~-----~~~~~~~~~~~~-------~---~~~~~V~~~g~~~~~~~~~~~~~ad 269 (363)
T cd04955 212 IEAFSKSNS-------GKKLVIVGNAD-----HNTPYGKLLKEK-------A---AADPRIIFVGPIYDQELLELLRYAA 269 (363)
T ss_pred HHHHHhhcc-------CceEEEEcCCC-----CcchHHHHHHHH-------h---CCCCcEEEccccChHHHHHHHHhCC
Confidence 999987632 35588888542 112333333321 1 1234566788999999999999999
Q ss_pred eeeecccc-ccCCCcccceeeeecCCCCCCCCCCCCCCCCceEEecCCccccccc-CCceeeCCCCHHHHHHHHHHHHcC
Q 003025 435 CVVVTAVR-DGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIGCSPSL-SGAIRVNPWNIEATAEAMHEAIQM 512 (856)
Q Consensus 435 v~vvtS~~-EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l-~~al~VnP~d~~~~A~ai~~aL~m 512 (856)
++++||.. ||||++++|||+|+. |+|+|..+|..+.+ .+|..++|.|. +|++|.++++.
T Consensus 270 ~~v~ps~~~e~~~~~~~EAma~G~-----------------PvI~s~~~~~~e~~~~~g~~~~~~~~--l~~~i~~l~~~ 330 (363)
T cd04955 270 LFYLHGHSVGGTNPSLLEAMAYGC-----------------PVLASDNPFNREVLGDKAIYFKVGDD--LASLLEELEAD 330 (363)
T ss_pred EEEeCCccCCCCChHHHHHHHcCC-----------------CEEEecCCccceeecCCeeEecCchH--HHHHHHHHHhC
Confidence 99999999 999999999999955 99999999888877 45888888776 99999999986
Q ss_pred CHHHHHHHHHHHhhhhh-cCCHHHHHHHHHHHH
Q 003025 513 NEAEKQLRHEKHYRYVS-THDVAYWARSFFQDM 544 (856)
Q Consensus 513 ~~~er~~r~~~~~~~v~-~~~~~~W~~~~l~~l 544 (856)
++ .+....++.++.+. .+++..-++++++.+
T Consensus 331 ~~-~~~~~~~~~~~~~~~~fs~~~~~~~~~~~y 362 (363)
T cd04955 331 PE-EVSAMAKAARERIREKYTWEKIADQYEELY 362 (363)
T ss_pred HH-HHHHHHHHHHHHHHHhCCHHHHHHHHHHHh
Confidence 63 34444455566665 488888888776543
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog |
| >cd03802 GT1_AviGT4_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.70 E-value=1e-15 Score=168.74 Aligned_cols=246 Identities=16% Similarity=0.089 Sum_probs=164.4
Q ss_pred HHHHcCCCCCEEEEeCcccchHHHHHHhhcCCCeEEEEEccCCCChHHHhcCCchHHHHHHhHhCCEEcccCHHHHHHHH
Q 003025 193 VIEVINPEDDYVWIHDYHLMVLPTFLRRRFTRLRMGFFLHSPFPSSEIYRTLPVREEILKALLNADLIGFHTFDYARHFL 272 (856)
Q Consensus 193 i~~~~~~~~D~VwihDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~~~~lp~r~eil~~ll~~dligf~t~~~~~~Fl 272 (856)
+++..++ |+|++|+....++ + .+..+.++.+.+|..++..... ........+.+-+-+....+.+.
T Consensus 82 ~~~~~~~--Divh~~~~~~~~~---~-~~~~~~~~v~~~h~~~~~~~~~--------~~~~~~~~~~~~~~s~~~~~~~~ 147 (335)
T cd03802 82 ALAAGDF--DIVHNHSLHLPLP---F-ARPLPVPVVTTLHGPPDPELLK--------LYYAARPDVPFVSISDAQRRPWP 147 (335)
T ss_pred HHhcCCC--CEEEecCcccchh---h-hcccCCCEEEEecCCCCcccch--------HHHhhCcCCeEEEecHHHHhhcc
Confidence 3444555 8999999888776 2 3345788999999876532111 22233333433322222111110
Q ss_pred HHHHhhhCceecccCceeeEEECCEEEEEEEeecccCchHHHHHhcCchHHHHHHHHHHHcCCCeEEEeccCccccCCHH
Q 003025 273 SCCSRMLGLEYQSKRGYIGLEYYGRTVGIKIMPVGIHMGQIESVLRLADKDWRVQELKQQFEGKTVLLGVDDMDIFKGVD 352 (856)
Q Consensus 273 ~~~~r~lg~~~~~~~~~~~~~~~gr~~~i~i~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~k~iil~VdRld~~KGi~ 352 (856)
.. .++.++|+|||.+.|.. ...++.+++++||+.+.||+.
T Consensus 148 -----------------------~~-~~~~vi~ngvd~~~~~~----------------~~~~~~~i~~~Gr~~~~Kg~~ 187 (335)
T cd03802 148 -----------------------PL-PWVATVHNGIDLDDYPF----------------RGPKGDYLLFLGRISPEKGPH 187 (335)
T ss_pred -----------------------cc-cccEEecCCcChhhCCC----------------CCCCCCEEEEEEeeccccCHH
Confidence 00 35678899999987742 013467899999999999999
Q ss_pred HHHHHHHHHHHhCCCCcCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCcccEEEEcCCCCHHHHHHHHHh
Q 003025 353 LKLLAMEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDKPVTLSERAAYYTI 432 (856)
Q Consensus 353 ~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~~~~lv~~IN~~~~~~~~~pvv~~~~~v~~~el~aly~~ 432 (856)
.+++|+++ ++ +.|+++|... ....+...+.+... ..+.+.+.|.++.+++..+|+.
T Consensus 188 ~li~~~~~-----~~----~~l~i~G~~~-----~~~~~~~~~~~~~~----------~~~~v~~~G~~~~~~~~~~~~~ 243 (335)
T cd03802 188 LAIRAARR-----AG----IPLKLAGPVS-----DPDYFYREIAPELL----------DGPDIEYLGEVGGAEKAELLGN 243 (335)
T ss_pred HHHHHHHh-----cC----CeEEEEeCCC-----CHHHHHHHHHHhcc----------cCCcEEEeCCCCHHHHHHHHHh
Confidence 99998754 33 4477777532 21222222222210 1234567789999999999999
Q ss_pred cceeeeccc-cccCCCcccceeeeecCCCCCCCCCCCCCCCCceEEecCCcccccccC---CceeeCCCCHHHHHHHHHH
Q 003025 433 AECVVVTAV-RDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIGCSPSLS---GAIRVNPWNIEATAEAMHE 508 (856)
Q Consensus 433 ADv~vvtS~-~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~al~VnP~d~~~~A~ai~~ 508 (856)
||++++||. .||||++++|||+|+. |+|+|+.+|..+.+. +|+++++ +++++++|.+
T Consensus 244 ~d~~v~ps~~~E~~~~~~lEAma~G~-----------------PvI~~~~~~~~e~i~~~~~g~l~~~--~~~l~~~l~~ 304 (335)
T cd03802 244 ARALLFPILWEEPFGLVMIEAMACGT-----------------PVIAFRRGAVPEVVEDGVTGFLVDS--VEELAAAVAR 304 (335)
T ss_pred CcEEEeCCcccCCcchHHHHHHhcCC-----------------CEEEeCCCCchhheeCCCcEEEeCC--HHHHHHHHHH
Confidence 999999997 5999999999999954 999999999998883 4889987 9999999999
Q ss_pred HHcCCHHHHHHHHHHHhhh-hhcCCHHHHHHHHHH
Q 003025 509 AIQMNEAEKQLRHEKHYRY-VSTHDVAYWARSFFQ 542 (856)
Q Consensus 509 aL~m~~~er~~r~~~~~~~-v~~~~~~~W~~~~l~ 542 (856)
++..+... .++. ...+++..-++++++
T Consensus 305 l~~~~~~~-------~~~~~~~~~s~~~~~~~~~~ 332 (335)
T cd03802 305 ADRLDRAA-------CRRRAERRFSAARMVDDYLA 332 (335)
T ss_pred HhccHHHH-------HHHHHHHhCCHHHHHHHHHH
Confidence 87654221 1222 255677666666654
|
aviGT4 in Streptomyces viridochromogenes has been shown to be involved in biosynthesis of oligosaccharide antibiotic avilamycin A. Inactivation of aviGT4 resulted in a mutant that accumulated a novel avilamycin derivative lacking the terminal eurekanate residue. |
| >cd03825 GT1_wcfI_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.68 E-value=1.2e-15 Score=170.09 Aligned_cols=194 Identities=18% Similarity=0.178 Sum_probs=141.9
Q ss_pred EEEEEeecccCchHHHHHhcCchHHHHHHHHHHHc---CCCeEEEeccCccc--cCCHHHHHHHHHHHHHh-CCCCcCce
Q 003025 299 VGIKIMPVGIHMGQIESVLRLADKDWRVQELKQQF---EGKTVLLGVDDMDI--FKGVDLKLLAMEHLLKQ-HPKWQGRA 372 (856)
Q Consensus 299 ~~i~i~p~GId~~~~~~~~~~~~~~~~~~~l~~~~---~~k~iil~VdRld~--~KGi~~~l~A~~~ll~~-~p~~~~~v 372 (856)
.++.++|+|||...+.+.. . ...++.+ .++.+++.+++... .||+..+++|++.+.++ .| ++
T Consensus 159 ~~~~vi~ngi~~~~~~~~~-----~---~~~~~~~~~~~~~~~i~~~~~~~~~~~K~~~~ll~a~~~l~~~~~~----~~ 226 (365)
T cd03825 159 IPIEVIPNGIDTTIFRPRD-----K---REARKRLGLPADKKIILFGAVGGTDPRKGFDELIEALKRLAERWKD----DI 226 (365)
T ss_pred CceEEeCCCCcccccCCCc-----H---HHHHHHhCCCCCCeEEEEEecCCCccccCHHHHHHHHHHhhhccCC----Ce
Confidence 3577899999988764211 1 1223333 34566666666654 89999999999988765 34 45
Q ss_pred EEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCcccEEEEcCCCC-HHHHHHHHHhcceeeeccccccCCCcccc
Q 003025 373 VLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDKPVT-LSERAAYYTIAECVVVTAVRDGMNLTPYE 451 (856)
Q Consensus 373 vLvqi~~p~r~~~~~~~~l~~~~~~lv~~IN~~~~~~~~~pvv~~~~~v~-~~el~aly~~ADv~vvtS~~EG~nLv~~E 451 (856)
.++.+|... .... . +....+.+.+.++ .+++..+|+.||+++.||..||||++++|
T Consensus 227 ~~~i~G~~~-----~~~~--~----------------~~~~~v~~~g~~~~~~~~~~~~~~ad~~l~ps~~e~~g~~~~E 283 (365)
T cd03825 227 ELVVFGASD-----PEIP--P----------------DLPFPVHYLGSLNDDESLALIYSAADVFVVPSLQENFPNTAIE 283 (365)
T ss_pred EEEEeCCCc-----hhhh--c----------------cCCCceEecCCcCCHHHHHHHHHhCCEEEeccccccccHHHHH
Confidence 577777432 1000 0 1112345667787 88999999999999999999999999999
Q ss_pred eeeeecCCCCCCCCCCCCCCCCceEEecCCcccccccC---CceeeCCCCHHHHHHHHHHHHcCCHHHHHHHHHHHhhhh
Q 003025 452 YIVCRQGVSGSESSSESSAPKKSMLVVSEFIGCSPSLS---GAIRVNPWNIEATAEAMHEAIQMNEAEKQLRHEKHYRYV 528 (856)
Q Consensus 452 a~a~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~al~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v 528 (856)
||+|+. |+|+|+.+|..+.+. .|+++++.|++++|++|.++++.+ +++....++.++++
T Consensus 284 am~~g~-----------------PvI~~~~~~~~e~~~~~~~g~~~~~~~~~~~~~~l~~l~~~~-~~~~~~~~~~~~~~ 345 (365)
T cd03825 284 ALACGT-----------------PVVAFDVGGIPDIVDHGVTGYLAKPGDPEDLAEGIEWLLADP-DEREELGEAARELA 345 (365)
T ss_pred HHhcCC-----------------CEEEecCCCChhheeCCCceEEeCCCCHHHHHHHHHHHHhCH-HHHHHHHHHHHHHH
Confidence 999955 999999999888883 489999999999999999999744 44555555666666
Q ss_pred -hcCCHHHHHHHHHHHHH
Q 003025 529 -STHDVAYWARSFFQDME 545 (856)
Q Consensus 529 -~~~~~~~W~~~~l~~l~ 545 (856)
..+++...++++++-.+
T Consensus 346 ~~~~s~~~~~~~~~~~y~ 363 (365)
T cd03825 346 ENEFDSRVQAKRYLSLYE 363 (365)
T ss_pred HHhcCHHHHHHHHHHHHh
Confidence 45888888888876554
|
wcfI in Bacteroides fragilis has been shown to be involved in the capsular polysaccharide biosynthesis. |
| >PRK05749 3-deoxy-D-manno-octulosonic-acid transferase; Reviewed | Back alignment and domain information |
|---|
Probab=99.67 E-value=7.5e-15 Score=168.82 Aligned_cols=287 Identities=17% Similarity=0.205 Sum_probs=178.8
Q ss_pred HHHHHHHHcCCCCCEEEEeCcccchHHHHHHh-hcCCCeEEEEEccCCCC-hHHHhcCCchHHHHHHhH-hCCEEcccCH
Q 003025 189 FSQRVIEVINPEDDYVWIHDYHLMVLPTFLRR-RFTRLRMGFFLHSPFPS-SEIYRTLPVREEILKALL-NADLIGFHTF 265 (856)
Q Consensus 189 fa~~i~~~~~~~~D~VwihDyhl~llp~~lr~-~~~~~~i~~flH~PfP~-~e~~~~lp~r~eil~~ll-~~dligf~t~ 265 (856)
...++++.++| |+|++|.+.++ |.++.. +..++++.+..|.-.+. ...|+.+ ..+.+.++ .+|.|..++.
T Consensus 115 ~~~~~l~~~~P--d~v~~~~~~~~--~~~l~~~~~~~ip~vl~~~~~~~~s~~~~~~~---~~~~r~~~~~~d~ii~~S~ 187 (425)
T PRK05749 115 AVRRFLRFWRP--KLVIIMETELW--PNLIAELKRRGIPLVLANARLSERSFKRYQKF---KRFYRLLFKNIDLVLAQSE 187 (425)
T ss_pred HHHHHHHhhCC--CEEEEEecchh--HHHHHHHHHCCCCEEEEeccCChhhHHHHHHH---HHHHHHHHHhCCEEEECCH
Confidence 44555677888 89999988765 555533 33467777766643332 2233322 22333333 4799988998
Q ss_pred HHHHHHHHHHHhhhCceecccCceeeEEECCEEEEEEEeecc-cCchHHHHHhcCchHHHHHHHHHHHc-CCCeEEEecc
Q 003025 266 DYARHFLSCCSRMLGLEYQSKRGYIGLEYYGRTVGIKIMPVG-IHMGQIESVLRLADKDWRVQELKQQF-EGKTVLLGVD 343 (856)
Q Consensus 266 ~~~~~Fl~~~~r~lg~~~~~~~~~~~~~~~gr~~~i~i~p~G-Id~~~~~~~~~~~~~~~~~~~l~~~~-~~k~iil~Vd 343 (856)
...+.+.+ +|+. .. +.++|++ +|.... +........+++.+ ++++++++++
T Consensus 188 ~~~~~l~~-----~g~~---------------~~-i~vi~n~~~d~~~~------~~~~~~~~~~r~~~~~~~~vil~~~ 240 (425)
T PRK05749 188 EDAERFLA-----LGAK---------------NE-VTVTGNLKFDIEVP------PELAARAATLRRQLAPNRPVWIAAS 240 (425)
T ss_pred HHHHHHHH-----cCCC---------------CC-cEecccccccCCCC------hhhHHHHHHHHHHhcCCCcEEEEeC
Confidence 88877764 2321 11 2334442 222111 11112234556666 6788899998
Q ss_pred CccccCCHHHHHHHHHHHHHhCCCCcCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccC-CCC-c----ccEEEE
Q 003025 344 DMDIFKGVDLKLLAMEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFG-RPG-Y----EPVVFI 417 (856)
Q Consensus 344 Rld~~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~~~~lv~~IN~~~~-~~~-~----~pvv~~ 417 (856)
+. .|+...+++||.++++++|+++ |+++| +|++. .+++++++++.+-.+. ..+ . ...+++
T Consensus 241 ~~--~~~~~~ll~A~~~l~~~~~~~~----liivG-----~g~~r---~~~l~~~~~~~gl~~~~~~~~~~~~~~~~v~l 306 (425)
T PRK05749 241 TH--EGEEELVLDAHRALLKQFPNLL----LILVP-----RHPER---FKEVEELLKKAGLSYVRRSQGEPPSADTDVLL 306 (425)
T ss_pred CC--chHHHHHHHHHHHHHHhCCCcE----EEEcC-----CChhh---HHHHHHHHHhCCCcEEEccCCCCCCCCCcEEE
Confidence 75 5889999999999998899765 66665 34443 1234444444332110 000 0 012333
Q ss_pred cCCCCHHHHHHHHHhcceeee-ccccccCCCcccceeeeecCCCCCCCCCCCCCCCCceEEecCCcccc----ccc-CCc
Q 003025 418 DKPVTLSERAAYYTIAECVVV-TAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIGCS----PSL-SGA 491 (856)
Q Consensus 418 ~~~v~~~el~aly~~ADv~vv-tS~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~----~~l-~~a 491 (856)
.+ +..|+..+|+.||++++ +|..||+|++++|||+|+. |+|++...|.. +.+ .+|
T Consensus 307 ~~--~~~el~~~y~~aDi~~v~~S~~e~~g~~~lEAma~G~-----------------PVI~g~~~~~~~e~~~~~~~~g 367 (425)
T PRK05749 307 GD--TMGELGLLYAIADIAFVGGSLVKRGGHNPLEPAAFGV-----------------PVISGPHTFNFKEIFERLLQAG 367 (425)
T ss_pred Ee--cHHHHHHHHHhCCEEEECCCcCCCCCCCHHHHHHhCC-----------------CEEECCCccCHHHHHHHHHHCC
Confidence 33 36799999999999666 6888999999999999954 89987654433 222 357
Q ss_pred eeeCCCCHHHHHHHHHHHHcCCHHHHHHHHHHHhhhhhcCCHHHHHHHHHHHHH
Q 003025 492 IRVNPWNIEATAEAMHEAIQMNEAEKQLRHEKHYRYVSTHDVAYWARSFFQDME 545 (856)
Q Consensus 492 l~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~l~ 545 (856)
.++.|.|++++|++|.++++ +++.+..+.++.++++.++. .-+++.++.+.
T Consensus 368 ~~~~~~d~~~La~~l~~ll~-~~~~~~~m~~~a~~~~~~~~--~~~~~~~~~l~ 418 (425)
T PRK05749 368 AAIQVEDAEDLAKAVTYLLT-DPDARQAYGEAGVAFLKQNQ--GALQRTLQLLE 418 (425)
T ss_pred CeEEECCHHHHHHHHHHHhc-CHHHHHHHHHHHHHHHHhCc--cHHHHHHHHHH
Confidence 88889999999999999997 45666677777888887662 33344444443
|
|
| >PLN02275 transferase, transferring glycosyl groups | Back alignment and domain information |
|---|
Probab=99.66 E-value=4.7e-15 Score=167.40 Aligned_cols=239 Identities=10% Similarity=0.004 Sum_probs=155.3
Q ss_pred cCCCCCEEEEeCcccch--HHHHHHhhcCCCeEEEEEccCCCChHHHhc-C---Cc----hHHHHHH-hHhCCEEcccCH
Q 003025 197 INPEDDYVWIHDYHLMV--LPTFLRRRFTRLRMGFFLHSPFPSSEIYRT-L---PV----REEILKA-LLNADLIGFHTF 265 (856)
Q Consensus 197 ~~~~~D~VwihDyhl~l--lp~~lr~~~~~~~i~~flH~PfP~~e~~~~-l---p~----r~eil~~-ll~~dligf~t~ 265 (856)
.+| |+|++|..+.+. ++..+-.+..++|+.+.+|..+.+ .+.. . +. ...+-+. .-.+|.|-..+.
T Consensus 99 ~~~--DvV~~~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~--~~~~~~~~~~~~~~~~~~~e~~~~~~ad~ii~~S~ 174 (371)
T PLN02275 99 PRP--DVFLVQNPPSVPTLAVVKLACWLRRAKFVIDWHNFGYT--LLALSLGRSHPLVRLYRWYERHYGKMADGHLCVTK 174 (371)
T ss_pred CCC--CEEEEeCCCCcHHHHHHHHHHHHhCCCEEEEcCCccHH--HHhcccCCCCHHHHHHHHHHHHHHhhCCEEEECCH
Confidence 455 899999877532 344343444578899999975421 1110 0 00 0111111 123566666665
Q ss_pred HHHHHHHHHHHhhhCceecccCceeeEEECCEEEEEEEeecccCchHHHHHhcCchHHHHHHHHHHHcCCCeEEEeccCc
Q 003025 266 DYARHFLSCCSRMLGLEYQSKRGYIGLEYYGRTVGIKIMPVGIHMGQIESVLRLADKDWRVQELKQQFEGKTVLLGVDDM 345 (856)
Q Consensus 266 ~~~~~Fl~~~~r~lg~~~~~~~~~~~~~~~gr~~~i~i~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~k~iil~VdRl 345 (856)
...+...+ ..|.. +.++|+|+ .+.|.+... . ..++ ...+.++++++|+
T Consensus 175 ~~~~~l~~--------------------~~g~~--i~vi~n~~-~~~f~~~~~-----~--~~~~--~~~~~~i~~~grl 222 (371)
T PLN02275 175 AMQHELDQ--------------------NWGIR--ATVLYDQP-PEFFRPASL-----E--IRLR--PNRPALVVSSTSW 222 (371)
T ss_pred HHHHHHHH--------------------hcCCC--eEEECCCC-HHHcCcCCc-----h--hccc--CCCcEEEEEeCce
Confidence 44443322 01111 56778884 455542211 0 0111 1245678899999
Q ss_pred cccCCHHHHHHHHHHHHH-----------------hCCCCcCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCC
Q 003025 346 DIFKGVDLKLLAMEHLLK-----------------QHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGR 408 (856)
Q Consensus 346 d~~KGi~~~l~A~~~ll~-----------------~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~~~~lv~~IN~~~~~ 408 (856)
.+.||+..+++|+..+.. ++|+ +.|+++| +|++.++++++++++
T Consensus 223 ~~~k~~~~li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~----i~l~ivG-----~G~~~~~l~~~~~~~---------- 283 (371)
T PLN02275 223 TPDEDFGILLEAAVMYDRRVAARLNESDSASGKQSLYPR----LLFIITG-----KGPQKAMYEEKISRL---------- 283 (371)
T ss_pred eccCCHHHHHHHHHHHHhhhhhccccccccccccccCCC----eEEEEEe-----CCCCHHHHHHHHHHc----------
Confidence 999999999999988752 2454 5588887 455555555554443
Q ss_pred CCcccEEEEcCCCCHHHHHHHHHhcceeeecc---ccccCCCcccceeeeecCCCCCCCCCCCCCCCCceEEecCCcccc
Q 003025 409 PGYEPVVFIDKPVTLSERAAYYTIAECVVVTA---VRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIGCS 485 (856)
Q Consensus 409 ~~~~pvv~~~~~v~~~el~aly~~ADv~vvtS---~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~ 485 (856)
+...++++.+.++.+++..+|+.||+||+++ ..|||+.+.+|||||+. |+|+|..+|..
T Consensus 284 -~l~~v~~~~~~~~~~~~~~~l~~aDv~v~~~~s~~~e~~p~~llEAmA~G~-----------------PVVa~~~gg~~ 345 (371)
T PLN02275 284 -NLRHVAFRTMWLEAEDYPLLLGSADLGVSLHTSSSGLDLPMKVVDMFGCGL-----------------PVCAVSYSCIG 345 (371)
T ss_pred -CCCceEEEcCCCCHHHHHHHHHhCCEEEEeccccccccccHHHHHHHHCCC-----------------CEEEecCCChH
Confidence 3455777777889999999999999999853 24899999999999955 99999999988
Q ss_pred cccC---CceeeCCCCHHHHHHHHHHHH
Q 003025 486 PSLS---GAIRVNPWNIEATAEAMHEAI 510 (856)
Q Consensus 486 ~~l~---~al~VnP~d~~~~A~ai~~aL 510 (856)
+.+. .|++|+ |++++|++|.++|
T Consensus 346 eiv~~g~~G~lv~--~~~~la~~i~~l~ 371 (371)
T PLN02275 346 ELVKDGKNGLLFS--SSSELADQLLELL 371 (371)
T ss_pred HHccCCCCeEEEC--CHHHHHHHHHHhC
Confidence 8883 388986 6999999998765
|
|
| >COG0297 GlgA Glycogen synthase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.63 E-value=2.5e-14 Score=163.25 Aligned_cols=295 Identities=21% Similarity=0.228 Sum_probs=194.2
Q ss_pred CEEEEeCcccchHHHHHHhh---cCCCeEEEEEccC-----CC-ChHHHhcCCc---h---------HHHHH-HhHhCCE
Q 003025 202 DYVWIHDYHLMVLPTFLRRR---FTRLRMGFFLHSP-----FP-SSEIYRTLPV---R---------EEILK-ALLNADL 259 (856)
Q Consensus 202 D~VwihDyhl~llp~~lr~~---~~~~~i~~flH~P-----fP-~~e~~~~lp~---r---------~eil~-~ll~~dl 259 (856)
|||++||||..|+|.++++. ...++..|+.|.= |+ ...-...||. . -..++ |+..+|.
T Consensus 132 DIvH~hDWqt~L~~~~lk~~~~~~~~i~tVfTIHNl~~qG~~~~~~~~~lgLp~~~~~~~~l~~~~~~~~lK~gi~~ad~ 211 (487)
T COG0297 132 DIVHAHDWQTGLLPAYLKQRYRSGYIIPTVFTIHNLAYQGLFRLQYLEELGLPFEAYASFGLEFYGQISFLKGGLYYADA 211 (487)
T ss_pred CEEEeecHHHHHHHHHHhhcccccccCCeEEEEeeceeecccchhhHHHhcCCHHHhhhceeeecCcchhhhhhheeccE
Confidence 99999999999999999997 7889999999942 23 1222233441 0 01222 4666677
Q ss_pred EcccCHHHHHHHHHHHHhhhCceecccCceeeEEECCEEEEEEEeecccCchHHHHHhcC-----------chHHHHHHH
Q 003025 260 IGFHTFDYARHFLSCCSRMLGLEYQSKRGYIGLEYYGRTVGIKIMPVGIHMGQIESVLRL-----------ADKDWRVQE 328 (856)
Q Consensus 260 igf~t~~~~~~Fl~~~~r~lg~~~~~~~~~~~~~~~gr~~~i~i~p~GId~~~~~~~~~~-----------~~~~~~~~~ 328 (856)
|.--++.|++.-...--. .|++ | .+.+ +.-.+.-+-+|||.....+.... +........
T Consensus 212 vttVSptYa~Ei~t~~~g-~gl~-----g--~l~~--~~~~l~GI~NgiD~~~wnp~~d~~~~~~y~~~~~~~k~~nk~~ 281 (487)
T COG0297 212 VTTVSPTYAGEIYTPEYG-EGLE-----G--LLSW--RSGKLSGILNGIDYDLWNPETDPYIAANYSAEVLPAKAENKVA 281 (487)
T ss_pred EEEECHHHHHhhcccccc-ccch-----h--hhhh--ccccEEEEEeeEEecccCcccccchhccCCccchhhhHHHHHH
Confidence 766666666554410000 0000 0 0111 11334444567776654332110 011222344
Q ss_pred HHHHc--C---CCeEEEeccCccccCCHHHHHHHHHHHHHhCCCCcCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHh
Q 003025 329 LKQQF--E---GKTVLLGVDDMDIFKGVDLKLLAMEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRIN 403 (856)
Q Consensus 329 l~~~~--~---~k~iil~VdRld~~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~~~~lv~~IN 403 (856)
|++.+ . +.+++..|+|++..||++.+++|++.++++. ++ ||.+|.+ ...++..+..++.++.
T Consensus 282 L~~~~gL~~~~~~pl~~~vsRl~~QKG~dl~~~~i~~~l~~~--~~----~vilG~g-------d~~le~~~~~la~~~~ 348 (487)
T COG0297 282 LQERLGLDVDLPGPLFGFVSRLTAQKGLDLLLEAIDELLEQG--WQ----LVLLGTG-------DPELEEALRALASRHP 348 (487)
T ss_pred HHHHhCCCCCCCCcEEEEeeccccccchhHHHHHHHHHHHhC--ce----EEEEecC-------cHHHHHHHHHHHHhcC
Confidence 55555 2 4689999999999999999999999999987 54 7777743 2467888888888876
Q ss_pred cccCCCCcccEEEEcCCCCHHHHHHHHHhcceeeeccccccCCCcccceeeeecCCCCCCCCCCCCCCCCceEEecCCcc
Q 003025 404 ETFGRPGYEPVVFIDKPVTLSERAAYYTIAECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIG 483 (856)
Q Consensus 404 ~~~~~~~~~pvv~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~g~lV~Se~~G 483 (856)
.++ .+.-..+..-...+|..||++++||..|++||+-+++|.- ++++|+.+.+|
T Consensus 349 ~~~---------~~~i~~~~~la~~i~agaD~~lmPSrfEPcGL~ql~amry-----------------GtvpIv~~tGG 402 (487)
T COG0297 349 GRV---------LVVIGYDEPLAHLIYAGADVILMPSRFEPCGLTQLYAMRY-----------------GTLPIVRETGG 402 (487)
T ss_pred ceE---------EEEeeecHHHHHHHHhcCCEEEeCCcCcCCcHHHHHHHHc-----------------CCcceEcccCC
Confidence 643 2222344566678999999999999999999999999998 45999999999
Q ss_pred cccccC----------C-ceeeCCCCHHHHHHHHHHHHcCCHHHHHHHHHHHhhhh--hcCCHHHHHHHHHHHHHH
Q 003025 484 CSPSLS----------G-AIRVNPWNIEATAEAMHEAIQMNEAEKQLRHEKHYRYV--STHDVAYWARSFFQDMER 546 (856)
Q Consensus 484 ~~~~l~----------~-al~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v--~~~~~~~W~~~~l~~l~~ 546 (856)
.++.+. + |+++.|.|.++++.||.+|+..-...+.. +++..+.. ..+++..=+.++..--+.
T Consensus 403 LadTV~~~~~~~~~~~gtGf~f~~~~~~~l~~al~rA~~~y~~~~~~-w~~~~~~~m~~d~sw~~sa~~y~~lY~~ 477 (487)
T COG0297 403 LADTVVDRNEWLIQGVGTGFLFLQTNPDHLANALRRALVLYRAPPLL-WRKVQPNAMGADFSWDLSAKEYVELYKP 477 (487)
T ss_pred ccceecCccchhccCceeEEEEecCCHHHHHHHHHHHHHHhhCCHHH-HHHHHHhhcccccCchhHHHHHHHHHHH
Confidence 999883 2 78898889999999999999744322210 22333333 345556666666554443
|
|
| >PF00534 Glycos_transf_1: Glycosyl transferases group 1; InterPro: IPR001296 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.61 E-value=2.8e-15 Score=149.80 Aligned_cols=143 Identities=21% Similarity=0.369 Sum_probs=111.9
Q ss_pred CCCeEEEeccCccccCCHHHHHHHHHHHHHh-CCCCcCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCcc
Q 003025 334 EGKTVLLGVDDMDIFKGVDLKLLAMEHLLKQ-HPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYE 412 (856)
Q Consensus 334 ~~k~iil~VdRld~~KGi~~~l~A~~~ll~~-~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~~~~lv~~IN~~~~~~~~~ 412 (856)
.++++|++++|+++.||+..+++|+..+.++ .+++ .|+.+|. ++... .+..++...+ ..
T Consensus 13 ~~~~~il~~g~~~~~K~~~~li~a~~~l~~~~~~~~----~l~i~G~-----~~~~~----~~~~~~~~~~-------~~ 72 (172)
T PF00534_consen 13 DKKKIILFIGRLDPEKGIDLLIEAFKKLKEKKNPNY----KLVIVGD-----GEYKK----ELKNLIEKLN-------LK 72 (172)
T ss_dssp TTSEEEEEESESSGGGTHHHHHHHHHHHHHHHHTTE----EEEEESH-----CCHHH----HHHHHHHHTT-------CG
T ss_pred CCCeEEEEEecCccccCHHHHHHHHHHHHhhcCCCe----EEEEEcc-----ccccc----cccccccccc-------cc
Confidence 5789999999999999999999999999875 6654 4777762 22222 3333333322 22
Q ss_pred cEEEEcCCCCHHHHHHHHHhcceeeeccccccCCCcccceeeeecCCCCCCCCCCCCCCCCceEEecCCcccccccC---
Q 003025 413 PVVFIDKPVTLSERAAYYTIAECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIGCSPSLS--- 489 (856)
Q Consensus 413 pvv~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~--- 489 (856)
..+.+.+.++.+++.++|+.||++|.||..||+|++++|||+|+ .|+|+|..+|..+.+.
T Consensus 73 ~~i~~~~~~~~~~l~~~~~~~di~v~~s~~e~~~~~~~Ea~~~g-----------------~pvI~~~~~~~~e~~~~~~ 135 (172)
T PF00534_consen 73 ENIIFLGYVPDDELDELYKSSDIFVSPSRNEGFGLSLLEAMACG-----------------CPVIASDIGGNNEIINDGV 135 (172)
T ss_dssp TTEEEEESHSHHHHHHHHHHTSEEEE-BSSBSS-HHHHHHHHTT------------------EEEEESSTHHHHHSGTTT
T ss_pred ccccccccccccccccccccceeccccccccccccccccccccc-----------------cceeeccccCCceeecccc
Confidence 22334556778999999999999999999999999999999994 4999999888888883
Q ss_pred CceeeCCCCHHHHHHHHHHHHcCC
Q 003025 490 GAIRVNPWNIEATAEAMHEAIQMN 513 (856)
Q Consensus 490 ~al~VnP~d~~~~A~ai~~aL~m~ 513 (856)
.|+++++.|+++++++|.+++.++
T Consensus 136 ~g~~~~~~~~~~l~~~i~~~l~~~ 159 (172)
T PF00534_consen 136 NGFLFDPNDIEELADAIEKLLNDP 159 (172)
T ss_dssp SEEEESTTSHHHHHHHHHHHHHHH
T ss_pred ceEEeCCCCHHHHHHHHHHHHCCH
Confidence 368999999999999999999865
|
These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Proteins containign this domain transfer UDP, ADP, GDP or CMP linked sugars to a variety of substrates, including glycogen, fructose-6-phosphate and lipopolysaccharides. The bacterial enzymes are involved in various biosynthetic processes that include exopolysaccharide biosynthesis, lipopolysaccharide core biosynthesis and the biosynthesis of the slime polysaccaride colanic acid. Mutations in this domain of the human N-acetylglucosaminyl-phosphatidylinositol biosynthetic protein are the cause of paroxysmal nocturnal hemoglobinuria (PNH), an acquired hemolytic blood disorder characterised by venous thrombosis, erythrocyte hemolysis, infections and defective hematopoiesis.; GO: 0009058 biosynthetic process; PDB: 2L7C_A 2IV3_B 2IUY_B 2XA9_A 2XA1_B 2X6R_A 2XMP_B 2XA2_B 2X6Q_A 3QHP_B .... |
| >cd04950 GT1_like_1 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds | Back alignment and domain information |
|---|
Probab=99.53 E-value=6.7e-13 Score=150.03 Aligned_cols=267 Identities=13% Similarity=0.124 Sum_probs=167.3
Q ss_pred cCCCCCEEEEeCcccchHHHHHHhhcCCCeEEEEEccCCCChHHHhcCCc-hHHHHHHhHhCCEEcccCHHHHHHHHHHH
Q 003025 197 INPEDDYVWIHDYHLMVLPTFLRRRFTRLRMGFFLHSPFPSSEIYRTLPV-REEILKALLNADLIGFHTFDYARHFLSCC 275 (856)
Q Consensus 197 ~~~~~D~VwihDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~~~~lp~-r~eil~~ll~~dligf~t~~~~~~Fl~~~ 275 (856)
.+.++.++|.+..-...+... .+..++.+-+|-.|+...... +. ....-+.+-.||+|-..+....+.+..
T Consensus 99 ~~~~~~i~~~~~P~~~~~~~~----~~~~~~Vyd~~D~~~~~~~~~--~~~~~~e~~~~~~ad~vi~~S~~l~~~~~~-- 170 (373)
T cd04950 99 LGFGRPILWYYTPYTLPVAAL----LQASLVVYDCVDDLSAFPGGP--PELLEAERRLLKRADLVFTTSPSLYEAKRR-- 170 (373)
T ss_pred cCCCCcEEEEeCccHHHHHhh----cCCCeEEEEcccchhccCCCC--HHHHHHHHHHHHhCCEEEECCHHHHHHHhh--
Confidence 344457888875444443333 556788888776655322110 10 011223344688887777655433221
Q ss_pred HhhhCceecccCceeeEEECCEEEEEEEeecccCchHHHHHhcCchHHHHHHHHHHHcCCCeEEEeccCccccCCHHHHH
Q 003025 276 SRMLGLEYQSKRGYIGLEYYGRTVGIKIMPVGIHMGQIESVLRLADKDWRVQELKQQFEGKTVLLGVDDMDIFKGVDLKL 355 (856)
Q Consensus 276 ~r~lg~~~~~~~~~~~~~~~gr~~~i~i~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~k~iil~VdRld~~KGi~~~l 355 (856)
+ + .++.++|+|+|.+.|......+.. .+.+ ...++++|+++|+++..+++. +|
T Consensus 171 ------------------~-~--~~i~~i~ngvd~~~f~~~~~~~~~---~~~~--~~~~~~~i~y~G~l~~~~d~~-ll 223 (373)
T cd04950 171 ------------------L-N--PNVVLVPNGVDYEHFAAARDPPPP---PADL--AALPRPVIGYYGAIAEWLDLE-LL 223 (373)
T ss_pred ------------------C-C--CCEEEcccccCHHHhhcccccCCC---hhHH--hcCCCCEEEEEeccccccCHH-HH
Confidence 1 1 246678999999998643221110 1111 114678999999999966654 33
Q ss_pred HHHHHHHHhCCCCcCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCcccEEEEcCCCCHHHHHHHHHhcce
Q 003025 356 LAMEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDKPVTLSERAAYYTIAEC 435 (856)
Q Consensus 356 ~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~~~~lv~~IN~~~~~~~~~pvv~~~~~v~~~el~aly~~ADv 435 (856)
. .+.+.+|+++ |+.||... ...+. ..+ . . .+.+.+.|.++.+++.++|+.||+
T Consensus 224 ~---~la~~~p~~~----~vliG~~~-----~~~~~----~~~----~------~-~~nV~~~G~~~~~~l~~~l~~~Dv 276 (373)
T cd04950 224 E---ALAKARPDWS----FVLIGPVD-----VSIDP----SAL----L------R-LPNVHYLGPKPYKELPAYLAGFDV 276 (373)
T ss_pred H---HHHHHCCCCE----EEEECCCc-----CccCh----hHh----c------c-CCCEEEeCCCCHHHHHHHHHhCCE
Confidence 3 3445678875 77777431 10111 111 0 1 133556789999999999999999
Q ss_pred eeeccc-----cccCCCcccceeeeecCCCCCCCCCCCCCCCCceEEecCCcccccccCCceeeCCCCHHHHHHHHHHHH
Q 003025 436 VVVTAV-----RDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIGCSPSLSGAIRVNPWNIEATAEAMHEAI 510 (856)
Q Consensus 436 ~vvtS~-----~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~~al~VnP~d~~~~A~ai~~aL 510 (856)
+++|+. ++++++..+|||||+. |+|+|.+.++.+.. ++..+.+.|.++++++|.++|
T Consensus 277 ~l~P~~~~~~~~~~~P~Kl~EylA~G~-----------------PVVat~~~~~~~~~-~~~~~~~~d~~~~~~ai~~~l 338 (373)
T cd04950 277 AILPFRLNELTRATSPLKLFEYLAAGK-----------------PVVATPLPEVRRYE-DEVVLIADDPEEFVAAIEKAL 338 (373)
T ss_pred EecCCccchhhhcCCcchHHHHhccCC-----------------CEEecCcHHHHhhc-CcEEEeCCCHHHHHHHHHHHH
Confidence 999985 3578899999999965 99998876554433 344455679999999999988
Q ss_pred cCCHHHHHHHHHHHhhhhhcCCHHHHHHHHHHHHHH
Q 003025 511 QMNEAEKQLRHEKHYRYVSTHDVAYWARSFFQDMER 546 (856)
Q Consensus 511 ~m~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~l~~ 546 (856)
..+..++..+. ++.+.+|++..-++.+++.|..
T Consensus 339 ~~~~~~~~~~~---~~~~~~~sW~~~a~~~~~~l~~ 371 (373)
T cd04950 339 LEDGPARERRR---LRLAAQNSWDARAAEMLEALQE 371 (373)
T ss_pred hcCCchHHHHH---HHHHHHCCHHHHHHHHHHHHHh
Confidence 65544433322 2268889999989888866653
|
The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center |
| >COG3769 Predicted hydrolase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.52 E-value=1.2e-13 Score=136.79 Aligned_cols=200 Identities=19% Similarity=0.232 Sum_probs=123.6
Q ss_pred CCcEEEEEecCCCCCCCCCCCCCCCHHHHHHHHHHHhhCCCeEEEecCCChhhHHHhhcCC--CCccEEeeCCEEEEeCC
Q 003025 589 SKSRAILFDYDGTVMPQTSINKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSPC--KKLGIAAEHGYFMRWSA 666 (856)
Q Consensus 589 s~~rlI~~DlDGTLl~~~~~~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~~--~~lgliaenG~~I~~~~ 666 (856)
.++++||+|+||||++++ .+..|.. ..|.+| .+.|..|++||.++..++..+-..+ +.+.+++|||+.|+.+.
T Consensus 5 ~~~~lIFtDlD~TLl~~~-ye~~pA~---pv~~el-~d~G~~Vi~~SSKT~aE~~~l~~~l~v~~~p~iaEnG~aI~~p~ 79 (274)
T COG3769 5 QMPLLIFTDLDGTLLPHS-YEWQPAA---PVLLEL-KDAGVPVILCSSKTRAEMLYLQKSLGVQGLPLIAENGAAIYLPK 79 (274)
T ss_pred ccceEEEEcccCcccCCC-CCCCccc---hHHHHH-HHcCCeEEEeccchHHHHHHHHHhcCCCCCceeecCCceEEecc
Confidence 468999999999999932 3444443 445554 6679999999999999988877654 56889999999999764
Q ss_pred CcceEecCC--C--Cc---ccH---HHHHHHHHHHHhhcCCcceEEecc--------------cceEEeeecCCCCCCch
Q 003025 667 DEEWQNCGQ--S--VD---FGW---IQIAEPVMKLYTESTDGSYIEIKE--------------SALVWHHRDADPGFGSS 722 (856)
Q Consensus 667 ~~~w~~~~~--~--~~---~~w---~~~v~~i~~~~~~~~~Gs~ie~k~--------------~~l~~~~~~~dp~~~~~ 722 (856)
+ |..... . .. ... .+.+.+.++...+.+.-.++.+.. ..++.. +........+
T Consensus 80 ~--~~~~~~~~r~~~g~~~~elg~~l~~ire~l~kLee~~g~~~~~~~d~~ei~e~TGlpre~aaLa~~-rEyseti~~r 156 (274)
T COG3769 80 G--WFPFDGKPREISGISHIELGKVLEKIREKLDKLEEHFGFTTFDDVDDEEIAEWTGLPREQAALAML-REYSETIIWR 156 (274)
T ss_pred c--ccccCCCCceecceEeeehhhhHHHHHHHHHHHHHHhCeeEeccCCHHHHHHHhCCChHHhHHHHH-HHhhhheeec
Confidence 3 222100 0 00 011 122222222222211111111100 000000 0000000011
Q ss_pred hHHHHHHHHHHHhcCCCeEEEEcCeEEEEEeCCCCHHHHHHHHHHHhhhcCCCcceEEEEeCCchhHHHHHHccc
Q 003025 723 QAKELLDHLESVLANEPAAVKSGQFIVEVKPQGVSKGVVAEKIFTTMAESGRHADFVLCIGDDRSDEDMFEIIGN 797 (856)
Q Consensus 723 ~a~el~~~L~~~l~~~~~~v~~g~~~vEI~p~gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~ 797 (856)
.-++....+...+...+..++.|..+.-|......||.|+.++++.+...+- ..-++..||+.||.+||+....
T Consensus 157 s~d~~~~~~~~~L~e~glt~v~garf~~v~~as~gKg~Aa~~ll~~y~rl~~-~r~t~~~GDg~nD~Pl~ev~d~ 230 (274)
T COG3769 157 SSDERMAQFTARLNERGLTFVHGARFWHVLDASAGKGQAANWLLETYRRLGG-ARTTLGLGDGPNDAPLLEVMDY 230 (274)
T ss_pred ccchHHHHHHHHHHhcCceEEeccceEEEeccccCccHHHHHHHHHHHhcCc-eeEEEecCCCCCcccHHHhhhh
Confidence 2234555666677777889999999999999999999999999998743332 2259999999999999999874
|
|
| >KOG1111 consensus N-acetylglucosaminyltransferase complex, subunit PIG-A/SPT14, required for phosphatidylinositol biosynthesis/Sulfolipid synthase [Cell wall/membrane/envelope biogenesis; Posttranslational modification, protein turnover, chaperones; Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.49 E-value=8.4e-14 Score=147.44 Aligned_cols=187 Identities=14% Similarity=0.155 Sum_probs=144.1
Q ss_pred HHhhhCceecccCceeeEEECCEEEEEEEeecccCchHHHHHhcCchHHHHHHHHHHHc-CCCeEEEeccCccccCCHHH
Q 003025 275 CSRMLGLEYQSKRGYIGLEYYGRTVGIKIMPVGIHMGQIESVLRLADKDWRVQELKQQF-EGKTVLLGVDDMDIFKGVDL 353 (856)
Q Consensus 275 ~~r~lg~~~~~~~~~~~~~~~gr~~~i~i~p~GId~~~~~~~~~~~~~~~~~~~l~~~~-~~k~iil~VdRld~~KGi~~ 353 (856)
.+|.+.+++.++.+.+ +.-.-..-++.++|+-++...|.+.... +. .+...|+.++||-+.||+++
T Consensus 146 id~~IcVshtskentv-lr~~L~p~kvsvIPnAv~~~~f~P~~~~------------~~S~~i~~ivv~sRLvyrKGiDl 212 (426)
T KOG1111|consen 146 IDRIICVSHTSKENTV-LRGALAPAKVSVIPNAVVTHTFTPDAAD------------KPSADIITIVVASRLVYRKGIDL 212 (426)
T ss_pred CCcEEEEeecCCCceE-EEeccCHhHeeeccceeeccccccCccc------------cCCCCeeEEEEEeeeeeccchHH
Confidence 4455667777766532 2222233478899999999998753221 22 35588999999999999999
Q ss_pred HHHHHHHHHHhCCCCcCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCcccEEEEcCCCCHHHHHHHHHhc
Q 003025 354 KLLAMEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDKPVTLSERAAYYTIA 433 (856)
Q Consensus 354 ~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~~~~lv~~IN~~~~~~~~~pvv~~~~~v~~~el~aly~~A 433 (856)
++..+.++-++||+.+ ++.+| +||....+++-+++. ..+..+.+.|.++++++-..|...
T Consensus 213 l~~iIp~vc~~~p~vr----fii~G-----DGPk~i~lee~lEk~-----------~l~~rV~~lG~v~h~~Vr~vl~~G 272 (426)
T KOG1111|consen 213 LLEIIPSVCDKHPEVR----FIIIG-----DGPKRIDLEEMLEKL-----------FLQDRVVMLGTVPHDRVRDVLVRG 272 (426)
T ss_pred HHHHHHHHHhcCCCee----EEEec-----CCcccchHHHHHHHh-----------hccCceEEecccchHHHHHHHhcC
Confidence 9999999999999977 77665 666544555554444 233455577899999999999999
Q ss_pred ceeeeccccccCCCcccceeeeecCCCCCCCCCCCCCCCCceEEecCCcccccccCCc-eeeCCCCHHHHHHHHHHHHc
Q 003025 434 ECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIGCSPSLSGA-IRVNPWNIEATAEAMHEAIQ 511 (856)
Q Consensus 434 Dv~vvtS~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~~a-l~VnP~d~~~~A~ai~~aL~ 511 (856)
|||+.||+.|.|+++..||+.|+. ++|.+..+|..+.|... +..-+-.++++++++.+|++
T Consensus 273 ~IFlntSlTEafc~~ivEAaScGL-----------------~VVsTrVGGIpeVLP~d~i~~~~~~~~dl~~~v~~ai~ 334 (426)
T KOG1111|consen 273 DIFLNTSLTEAFCMVIVEAASCGL-----------------PVVSTRVGGIPEVLPEDMITLGEPGPDDLVGAVEKAIT 334 (426)
T ss_pred cEEeccHHHHHHHHHHHHHHhCCC-----------------EEEEeecCCccccCCccceeccCCChHHHHHHHHHHHH
Confidence 999999999999999999999965 88999999999999544 43555578999999988886
|
|
| >PLN02605 monogalactosyldiacylglycerol synthase | Back alignment and domain information |
|---|
Probab=99.43 E-value=1.7e-11 Score=139.09 Aligned_cols=191 Identities=16% Similarity=0.178 Sum_probs=124.6
Q ss_pred EEEEeecccCchHHHHHhcCchHHHHHHHHHHHc---CCCeEEEeccCccccCCHHHHHHHHHHHHHh----CCCCcCce
Q 003025 300 GIKIMPVGIHMGQIESVLRLADKDWRVQELKQQF---EGKTVLLGVDDMDIFKGVDLKLLAMEHLLKQ----HPKWQGRA 372 (856)
Q Consensus 300 ~i~i~p~GId~~~~~~~~~~~~~~~~~~~l~~~~---~~k~iil~VdRld~~KGi~~~l~A~~~ll~~----~p~~~~~v 372 (856)
+|.+++++|+...+... + ...++++++ +++++|+.+||....||+...++++..++.. .+++
T Consensus 174 ki~v~g~~v~~~f~~~~---~----~~~~~r~~~gl~~~~~~il~~Gg~~g~~~~~~li~~l~~~~~~~~~~~~~~---- 242 (382)
T PLN02605 174 QIRVYGLPIRPSFARAV---R----PKDELRRELGMDEDLPAVLLMGGGEGMGPLEETARALGDSLYDKNLGKPIG---- 242 (382)
T ss_pred HEEEECcccCHhhccCC---C----CHHHHHHHcCCCCCCcEEEEECCCcccccHHHHHHHHHHhhccccccCCCc----
Confidence 34556778876433211 1 123355665 4688999999999999999999999876522 2333
Q ss_pred EEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCcccEEEEcCCCCHHHHHHHHHhcceeeeccccccCCCcccce
Q 003025 373 VLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDKPVTLSERAAYYTIAECVVVTAVRDGMNLTPYEY 452 (856)
Q Consensus 373 vLvqi~~p~r~~~~~~~~l~~~~~~lv~~IN~~~~~~~~~pvv~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea 452 (856)
.++.++. +++ ++++++++... + ..| .+.|.+ +++..||++||++|.+| .++++.||
T Consensus 243 ~~~vi~G----~~~---~~~~~L~~~~~------~----~~v-~~~G~~--~~~~~l~~aaDv~V~~~----g~~ti~EA 298 (382)
T PLN02605 243 QVVVICG----RNK---KLQSKLESRDW------K----IPV-KVRGFV--TNMEEWMGACDCIITKA----GPGTIAEA 298 (382)
T ss_pred eEEEEEC----CCH---HHHHHHHhhcc------c----CCe-EEEecc--ccHHHHHHhCCEEEECC----CcchHHHH
Confidence 2333432 222 23333333210 0 123 455665 47999999999999865 37899999
Q ss_pred eeeecCCCCCCCCCCCCCCCCceEEecCCc-----cccccc-CCceeeCCCCHHHHHHHHHHHHcCCHHHHHHHHHHHhh
Q 003025 453 IVCRQGVSGSESSSESSAPKKSMLVVSEFI-----GCSPSL-SGAIRVNPWNIEATAEAMHEAIQMNEAEKQLRHEKHYR 526 (856)
Q Consensus 453 ~a~~~~~~~~~~~~~~~~~~~g~lV~Se~~-----G~~~~l-~~al~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~ 526 (856)
|+|+. |+|++... |..+.+ .++..+.+.|+++++++|.++|..+++.++.+.++.++
T Consensus 299 ma~g~-----------------PvI~~~~~pgqe~gn~~~i~~~g~g~~~~~~~~la~~i~~ll~~~~~~~~~m~~~~~~ 361 (382)
T PLN02605 299 LIRGL-----------------PIILNGYIPGQEEGNVPYVVDNGFGAFSESPKEIARIVAEWFGDKSDELEAMSENALK 361 (382)
T ss_pred HHcCC-----------------CEEEecCCCccchhhHHHHHhCCceeecCCHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 99955 99999852 333444 34444456899999999999998645666666677777
Q ss_pred hhhcCCHHHHHHHHHH
Q 003025 527 YVSTHDVAYWARSFFQ 542 (856)
Q Consensus 527 ~v~~~~~~~W~~~~l~ 542 (856)
+...+....-++.+++
T Consensus 362 ~~~~~a~~~i~~~l~~ 377 (382)
T PLN02605 362 LARPEAVFDIVHDLHE 377 (382)
T ss_pred hcCCchHHHHHHHHHH
Confidence 7777776666654443
|
|
| >KOG0853 consensus Glycosyltransferase [Cell wall/membrane/envelope biogenesis] | Back alignment and domain information |
|---|
Probab=99.27 E-value=1.4e-10 Score=130.96 Aligned_cols=186 Identities=13% Similarity=0.127 Sum_probs=141.6
Q ss_pred CeEEEeccCccccCCHHHHHHHHHHHHHhCCCCc-CceEEEEEecC-CCCCchhHHHHHHHHHHHHHHHhcccCCCCccc
Q 003025 336 KTVLLGVDDMDIFKGVDLKLLAMEHLLKQHPKWQ-GRAVLVQIANP-ARGRGKDLEEIQAEIHATCKRINETFGRPGYEP 413 (856)
Q Consensus 336 k~iil~VdRld~~KGi~~~l~A~~~ll~~~p~~~-~~vvLvqi~~p-~r~~~~~~~~l~~~~~~lv~~IN~~~~~~~~~p 413 (856)
..+...+.|+.+-||+.+.|.||..+...-|+.. ....++..+++ ..+...+..++..++.+++++.+. +..
T Consensus 273 d~~~~siN~~~pgkd~~l~l~a~~~~~~~i~~~~~~~~hl~~~g~~G~d~~~sen~~~~~el~~lie~~~l------~g~ 346 (495)
T KOG0853|consen 273 DRFFPSINRFEPGKDQDLALPAFTLLHDSIPEPSISSEHLVVAGSRGYDERDSENVEYLKELLSLIEEYDL------LGQ 346 (495)
T ss_pred ceEeeeeeecCCCCCceeehhhHHhhhcccCCCCCCceEEEEecCCCccccchhhHHHHHHHHHHHHHhCc------cCc
Confidence 6789999999999999999999999988776521 12444444433 333344555666777777777432 134
Q ss_pred EEEEcCCCCHHHHHHHHHhcceeeeccccccCCCcccceeeeecCCCCCCCCCCCCCCCCceEEecCCcccccccC---C
Q 003025 414 VVFIDKPVTLSERAAYYTIAECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIGCSPSLS---G 490 (856)
Q Consensus 414 vv~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~ 490 (856)
.++|..+.++.+.+.++..+.+..+++..|.||+|++|||+|+. |+|++..+|..|.+. .
T Consensus 347 ~v~~~~s~~~~~~yrl~adt~~v~~qPa~E~FGiv~IEAMa~gl-----------------PvvAt~~GGP~EiV~~~~t 409 (495)
T KOG0853|consen 347 FVWFLPSTTRVAKYRLAADTKGVLYQPANEHFGIVPIEAMACGL-----------------PVVATNNGGPAEIVVHGVT 409 (495)
T ss_pred eEEEecCCchHHHHHHHHhcceEEecCCCCCccceeHHHHhcCC-----------------CEEEecCCCceEEEEcCCc
Confidence 67777778888888888888888889988999999999999965 999999999999993 4
Q ss_pred ceeeCCCCHH---HHHHHHHHHHcCCHHHHHHHHHHHhhhhhc-CCHHHHHHHHHHHHHHHHHh
Q 003025 491 AIRVNPWNIE---ATAEAMHEAIQMNEAEKQLRHEKHYRYVST-HDVAYWARSFFQDMERTCKD 550 (856)
Q Consensus 491 al~VnP~d~~---~~A~ai~~aL~m~~~er~~r~~~~~~~v~~-~~~~~W~~~~l~~l~~~~~~ 550 (856)
|++++| +.+ .+|++|.++.+.+ +.+....++.++.|.+ +++ +.|.+.+.....+
T Consensus 410 G~l~dp-~~e~~~~~a~~~~kl~~~p-~l~~~~~~~G~~rV~e~fs~----~~~~~ri~~~~~~ 467 (495)
T KOG0853|consen 410 GLLIDP-GQEAVAELADALLKLRRDP-ELWARMGKNGLKRVKEMFSW----QHYSERIASVLGK 467 (495)
T ss_pred ceeeCC-chHHHHHHHHHHHHHhcCH-HHHHHHHHHHHHHHHHHHhH----HHHHHHHHHHhHh
Confidence 999999 666 5999999999855 4477778889999988 555 5555555554433
|
|
| >cd01635 Glycosyltransferase_GTB_type Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds | Back alignment and domain information |
|---|
Probab=99.23 E-value=1.6e-10 Score=118.95 Aligned_cols=111 Identities=19% Similarity=0.212 Sum_probs=81.0
Q ss_pred eccCccccCCHHHHHHHHHHHHHhCCCCcCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCcccEEEEcCC
Q 003025 341 GVDDMDIFKGVDLKLLAMEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDKP 420 (856)
Q Consensus 341 ~VdRld~~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~~~~lv~~IN~~~~~~~~~pvv~~~~~ 420 (856)
++||+.+.||+...++|+..+.+++|+++ ++.+|... +....+..+... + ....+. +.+.
T Consensus 109 ~~g~~~~~k~~~~~~~a~~~l~~~~~~~~----~~i~G~~~-----~~~~~~~~~~~~--------~--~~~~v~-~~~~ 168 (229)
T cd01635 109 FVGRLAPEKGLDDLIEAFALLKERGPDLK----LVIAGDGP-----EREYLEELLAAL--------L--LLDRVI-FLGG 168 (229)
T ss_pred EEEeecccCCHHHHHHHHHHHHHhCCCeE----EEEEeCCC-----ChHHHHHHHHhc--------C--CcccEE-EeCC
Confidence 99999999999999999999998887654 88887532 111111111111 1 112344 4445
Q ss_pred C-CHHHHHHHHHhcceeeeccccccCCCcccceeeeecCCCCCCCCCCCCCCCCceEEecCCccccccc
Q 003025 421 V-TLSERAAYYTIAECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIGCSPSL 488 (856)
Q Consensus 421 v-~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l 488 (856)
+ +.+++..+++.||+++.||..||++.+.+|||+|+. |+|+|+..|..+.+
T Consensus 169 ~~~~~~~~~~~~~~di~l~~~~~e~~~~~~~Eam~~g~-----------------pvi~s~~~~~~e~i 220 (229)
T cd01635 169 LDPEELLALLLAAADVFVLPSLREGFGLVVLEAMACGL-----------------PVIATDVGGPPEIV 220 (229)
T ss_pred CCcHHHHHHHhhcCCEEEecccccCcChHHHHHHhCCC-----------------CEEEcCCCCcceEE
Confidence 5 456666666679999999999999999999999954 99999999887755
|
The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. The structures of the formed glycoconjugates are extremely diverse, reflecting a wide range of biological functions. The members of this family share a common GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. |
| >COG0438 RfaG Glycosyltransferase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=99.20 E-value=3.9e-10 Score=122.13 Aligned_cols=199 Identities=21% Similarity=0.248 Sum_probs=141.7
Q ss_pred EEEEeecccCchHHHHHhcCchHHHHHHHHHHHcCC--CeEEEeccCccccCCHHHHHHHHHHHHHhCCCCcCceEEEEE
Q 003025 300 GIKIMPVGIHMGQIESVLRLADKDWRVQELKQQFEG--KTVLLGVDDMDIFKGVDLKLLAMEHLLKQHPKWQGRAVLVQI 377 (856)
Q Consensus 300 ~i~i~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~--k~iil~VdRld~~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi 377 (856)
.+.+.|.|++...+... . ...... +.++++++|+++.||+...++|+..+.+..++ +.++.+
T Consensus 173 ~~~~~~~~~~~~~~~~~-----------~-~~~~~~~~~~~i~~~g~~~~~k~~~~~i~~~~~~~~~~~~----~~~~~~ 236 (381)
T COG0438 173 KIVVIPNGIDTEKFAPA-----------R-IGLLPEGGKFVVLYVGRLDPEKGLDLLIEAAAKLKKRGPD----IKLVIV 236 (381)
T ss_pred CceEecCCcCHHHcCcc-----------c-cCCCcccCceEEEEeeccChhcCHHHHHHHHHHhhhhcCC----eEEEEE
Confidence 55678999998877531 0 000112 37899999999999999999999999887765 446666
Q ss_pred ecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCcccEEEEcCCCCHHHHHHHHHhcceeeeccccccCCCcccceeeeec
Q 003025 378 ANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDKPVTLSERAAYYTIAECVVVTAVRDGMNLTPYEYIVCRQ 457 (856)
Q Consensus 378 ~~p~r~~~~~~~~l~~~~~~lv~~IN~~~~~~~~~pvv~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~a~~~ 457 (856)
|..... ...+..++.+.+. .+.+.+.+.++.+++..+|+.||+++.||..||+|++.+||++|+.
T Consensus 237 g~~~~~--------~~~~~~~~~~~~~-------~~~v~~~g~~~~~~~~~~~~~~~~~v~ps~~e~~~~~~~Ea~a~g~ 301 (381)
T COG0438 237 GDGPER--------REELEKLAKKLGL-------EDNVKFLGYVPDEELAELLASADVFVLPSLSEGFGLVLLEAMAAGT 301 (381)
T ss_pred cCCCcc--------HHHHHHHHHHhCC-------CCcEEEecccCHHHHHHHHHhCCEEEeccccccchHHHHHHHhcCC
Confidence 643311 1222223333322 2344557788888999999999999999999999999999999953
Q ss_pred CCCCCCCCCCCCCCCCceEEecCCcccccccCC---ceeeCCCCHHHHHHHHHHHHcCCHHHHHHHHHHHhhhh-hcCCH
Q 003025 458 GVSGSESSSESSAPKKSMLVVSEFIGCSPSLSG---AIRVNPWNIEATAEAMHEAIQMNEAEKQLRHEKHYRYV-STHDV 533 (856)
Q Consensus 458 ~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~~---al~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v-~~~~~ 533 (856)
|+|+|...|..+.+.+ |+++++.|.+++++++..++++. +.++...+..++.+ ..+++
T Consensus 302 -----------------pvi~~~~~~~~e~~~~~~~g~~~~~~~~~~~~~~i~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 363 (381)
T COG0438 302 -----------------PVIASDVGGIPEVVEDGETGLLVPPGDVEELADALEQLLEDP-ELREELGEAARERVEEEFSW 363 (381)
T ss_pred -----------------cEEECCCCChHHHhcCCCceEecCCCCHHHHHHHHHHHhcCH-HHHHHHHHHHHHHHHHhcCH
Confidence 9999999998888843 77888888999999999999876 33333333233334 56777
Q ss_pred HHHHHHHHHHHHHH
Q 003025 534 AYWARSFFQDMERT 547 (856)
Q Consensus 534 ~~W~~~~l~~l~~~ 547 (856)
..-++.+.+-+...
T Consensus 364 ~~~~~~~~~~~~~~ 377 (381)
T COG0438 364 ERIAEQLLELYEEL 377 (381)
T ss_pred HHHHHHHHHHHHHH
Confidence 77666555555443
|
|
| >PRK13609 diacylglycerol glucosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.20 E-value=2.6e-09 Score=121.06 Aligned_cols=273 Identities=10% Similarity=0.082 Sum_probs=160.8
Q ss_pred HHHHHHHHHHHHHHHcCCCCCEEEEeCcccchHHHHHHhhcCCCeEEEEEccCCCChHHHhcCCchHHHHHHhHhCCEEc
Q 003025 182 YVSANKIFSQRVIEVINPEDDYVWIHDYHLMVLPTFLRRRFTRLRMGFFLHSPFPSSEIYRTLPVREEILKALLNADLIG 261 (856)
Q Consensus 182 Y~~vN~~fa~~i~~~~~~~~D~VwihDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~~~~lp~r~eil~~ll~~dlig 261 (856)
+...+..-..++++..+| |+|..| +....++.+.+....++|+....+-..+... .+.+ .+|.+-
T Consensus 88 ~~~~~~~~l~~~l~~~~p--D~Vi~~-~~~~~~~~~~~~~~~~ip~~~~~td~~~~~~---------~~~~---~ad~i~ 152 (380)
T PRK13609 88 YANFGRKRLKLLLQAEKP--DIVINT-FPIIAVPELKKQTGISIPTYNVLTDFCLHKI---------WVHR---EVDRYF 152 (380)
T ss_pred HHHHHHHHHHHHHHHhCc--CEEEEc-ChHHHHHHHHHhcCCCCCeEEEeCCCCCCcc---------cccC---CCCEEE
Confidence 334444555667777788 888885 6667788777666666776533321111110 0111 588887
Q ss_pred ccCHHHHHHHHHHHHhhhCceecccCceeeEEECCEEEEEEEeecccCch-HHHHHhcCchHHHHHHHHHHHc---CCCe
Q 003025 262 FHTFDYARHFLSCCSRMLGLEYQSKRGYIGLEYYGRTVGIKIMPVGIHMG-QIESVLRLADKDWRVQELKQQF---EGKT 337 (856)
Q Consensus 262 f~t~~~~~~Fl~~~~r~lg~~~~~~~~~~~~~~~gr~~~i~i~p~GId~~-~~~~~~~~~~~~~~~~~l~~~~---~~k~ 337 (856)
..+....+.+.+ .|+.. .++.+ +|++.. .|... .+ ...+++++ ++++
T Consensus 153 ~~s~~~~~~l~~-----~gi~~---------------~ki~v--~G~p~~~~f~~~---~~----~~~~~~~~~l~~~~~ 203 (380)
T PRK13609 153 VATDHVKKVLVD-----IGVPP---------------EQVVE--TGIPIRSSFELK---IN----PDIIYNKYQLCPNKK 203 (380)
T ss_pred ECCHHHHHHHHH-----cCCCh---------------hHEEE--ECcccChHHcCc---CC----HHHHHHHcCCCCCCc
Confidence 777554444332 13210 12222 244332 23211 11 11244554 2444
Q ss_pred -EEEeccCccccCCHHHHHHHHHHHHHhCCCCcCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCcccEEE
Q 003025 338 -VLLGVDDMDIFKGVDLKLLAMEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVF 416 (856)
Q Consensus 338 -iil~VdRld~~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~~~~lv~~IN~~~~~~~~~pvv~ 416 (856)
+++..|++...||+...++++.+ .|++ .++.++.. ++ .+++++++++++.+ ..|++
T Consensus 204 ~il~~~G~~~~~k~~~~li~~l~~----~~~~----~~viv~G~---~~----~~~~~l~~~~~~~~--------~~v~~ 260 (380)
T PRK13609 204 ILLIMAGAHGVLGNVKELCQSLMS----VPDL----QVVVVCGK---NE----ALKQSLEDLQETNP--------DALKV 260 (380)
T ss_pred EEEEEcCCCCCCcCHHHHHHHHhh----CCCc----EEEEEeCC---CH----HHHHHHHHHHhcCC--------CcEEE
Confidence 56667999999999988888742 3544 36666531 12 23344444443321 12444
Q ss_pred EcCCCCHHHHHHHHHhcceeeeccccccCCCcccceeeeecCCCCCCCCCCCCCCCCceEEecC-Ccccc----ccc-CC
Q 003025 417 IDKPVTLSERAAYYTIAECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSE-FIGCS----PSL-SG 490 (856)
Q Consensus 417 ~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~g~lV~Se-~~G~~----~~l-~~ 490 (856)
.+.+ +++..+|+.||++|. ++.|++..|||+|+. |+|++. ..|.. ..+ ..
T Consensus 261 -~g~~--~~~~~l~~~aD~~v~----~~gg~t~~EA~a~g~-----------------PvI~~~~~~g~~~~n~~~~~~~ 316 (380)
T PRK13609 261 -FGYV--ENIDELFRVTSCMIT----KPGGITLSEAAALGV-----------------PVILYKPVPGQEKENAMYFERK 316 (380)
T ss_pred -Eech--hhHHHHHHhccEEEe----CCCchHHHHHHHhCC-----------------CEEECCCCCCcchHHHHHHHhC
Confidence 4565 468899999999874 455899999999965 888876 44421 122 23
Q ss_pred ceeeCCCCHHHHHHHHHHHHcCCHHHHHHHHHHHhhhhhcCCHHHHHHHHHHHHHH
Q 003025 491 AIRVNPWNIEATAEAMHEAIQMNEAEKQLRHEKHYRYVSTHDVAYWARSFFQDMER 546 (856)
Q Consensus 491 al~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~l~~ 546 (856)
|..+.+.|.++++++|.++++. ++.+..+.++.+++...++....++.+++.+..
T Consensus 317 G~~~~~~~~~~l~~~i~~ll~~-~~~~~~m~~~~~~~~~~~s~~~i~~~i~~~~~~ 371 (380)
T PRK13609 317 GAAVVIRDDEEVFAKTEALLQD-DMKLLQMKEAMKSLYLPEPADHIVDDILAENHV 371 (380)
T ss_pred CcEEEECCHHHHHHHHHHHHCC-HHHHHHHHHHHHHhCCCchHHHHHHHHHHhhhh
Confidence 5555578999999999999984 444555555666777778888888887776654
|
|
| >PRK00726 murG undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.19 E-value=8.2e-10 Score=123.92 Aligned_cols=258 Identities=17% Similarity=0.093 Sum_probs=159.0
Q ss_pred HHHHHcCCCCCEEEEeCcccchHHHHHHhhcCCCeEEEEEccCCCChHHHhcCCchHHHHHHhHhCCEEcccCHHHHHHH
Q 003025 192 RVIEVINPEDDYVWIHDYHLMVLPTFLRRRFTRLRMGFFLHSPFPSSEIYRTLPVREEILKALLNADLIGFHTFDYARHF 271 (856)
Q Consensus 192 ~i~~~~~~~~D~VwihDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~~~~lp~r~eil~~ll~~dligf~t~~~~~~F 271 (856)
++++..+| |+|+.|.....+. ..+..+..+.|+.++.|..+|.. -+.++- -.+|.+-..+..- +
T Consensus 85 ~~ik~~~p--Dvv~~~~~~~~~~-~~~~~~~~~~p~v~~~~~~~~~~--------~~r~~~--~~~d~ii~~~~~~---~ 148 (357)
T PRK00726 85 KILKRFKP--DVVVGFGGYVSGP-GGLAARLLGIPLVIHEQNAVPGL--------ANKLLA--RFAKKVATAFPGA---F 148 (357)
T ss_pred HHHHhcCC--CEEEECCCcchhH-HHHHHHHcCCCEEEEcCCCCccH--------HHHHHH--HHhchheECchhh---h
Confidence 45566677 9999998554433 43445566788888777655431 011111 1234433222210 0
Q ss_pred HHHHHhhhCceecccCceeeEEECCEEEEEEEeecccCchHHHHHhcCchHHHHHHHHHHHcCCCeEEEeccCccccCCH
Q 003025 272 LSCCSRMLGLEYQSKRGYIGLEYYGRTVGIKIMPVGIHMGQIESVLRLADKDWRVQELKQQFEGKTVLLGVDDMDIFKGV 351 (856)
Q Consensus 272 l~~~~r~lg~~~~~~~~~~~~~~~gr~~~i~i~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~k~iil~VdRld~~KGi 351 (856)
. . ....++.++|+|++.+.+.. +.. ..++ ..-.+.++|+.+++....|++
T Consensus 149 ~--------------------~--~~~~~i~vi~n~v~~~~~~~----~~~---~~~~-~~~~~~~~i~~~gg~~~~~~~ 198 (357)
T PRK00726 149 P--------------------E--FFKPKAVVTGNPVREEILAL----AAP---PARL-AGREGKPTLLVVGGSQGARVL 198 (357)
T ss_pred h--------------------c--cCCCCEEEECCCCChHhhcc----cch---hhhc-cCCCCCeEEEEECCcHhHHHH
Confidence 0 0 12245778999999876542 110 0111 111367888999999999998
Q ss_pred HHHH-HHHHHHHHhCCCCcCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCcccEEEEcCCCCHHHHHHHH
Q 003025 352 DLKL-LAMEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDKPVTLSERAAYY 430 (856)
Q Consensus 352 ~~~l-~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~~~~lv~~IN~~~~~~~~~pvv~~~~~v~~~el~aly 430 (856)
..++ +|+.++.+. | .+++++|. ++. +++.+.++ . +.. +.+.+.+ +++..+|
T Consensus 199 ~~~l~~a~~~~~~~-~-----~~~~~~G~-----g~~-~~~~~~~~---------~---~~~--v~~~g~~--~~~~~~~ 250 (357)
T PRK00726 199 NEAVPEALALLPEA-L-----QVIHQTGK-----GDL-EEVRAAYA---------A---GIN--AEVVPFI--DDMAAAY 250 (357)
T ss_pred HHHHHHHHHHhhhC-c-----EEEEEcCC-----CcH-HHHHHHhh---------c---CCc--EEEeehH--hhHHHHH
Confidence 7766 888877432 2 33555553 222 23322221 1 222 3345554 6899999
Q ss_pred HhcceeeeccccccCCCcccceeeeecCCCCCCCCCCCCCCCCceEEecCCccc--------cccc---CCceeeCCCC-
Q 003025 431 TIAECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIGC--------SPSL---SGAIRVNPWN- 498 (856)
Q Consensus 431 ~~ADv~vvtS~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~--------~~~l---~~al~VnP~d- 498 (856)
..||+++.+| | +.+.+|||+|+. |+|++...|. ++.+ ..|+++.|.|
T Consensus 251 ~~~d~~i~~~---g-~~~~~Ea~~~g~-----------------Pvv~~~~~~~~~~~~~~~~~~i~~~~~g~~~~~~~~ 309 (357)
T PRK00726 251 AAADLVICRA---G-ASTVAELAAAGL-----------------PAILVPLPHAADDHQTANARALVDAGAALLIPQSDL 309 (357)
T ss_pred HhCCEEEECC---C-HHHHHHHHHhCC-----------------CEEEecCCCCCcCcHHHHHHHHHHCCCEEEEEcccC
Confidence 9999999877 3 588999999965 8888754321 2334 2378888888
Q ss_pred -HHHHHHHHHHHHcCCHHHHHHHHHHHhhhhhcCCHHHHHHHHHHHHH
Q 003025 499 -IEATAEAMHEAIQMNEAEKQLRHEKHYRYVSTHDVAYWARSFFQDME 545 (856)
Q Consensus 499 -~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~l~ 545 (856)
+++++++|.+++.. ++.++...+..+++..+.+...-++.+++.+.
T Consensus 310 ~~~~l~~~i~~ll~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 356 (357)
T PRK00726 310 TPEKLAEKLLELLSD-PERLEAMAEAARALGKPDAAERLADLIEELAR 356 (357)
T ss_pred CHHHHHHHHHHHHcC-HHHHHHHHHHHHhcCCcCHHHHHHHHHHHHhh
Confidence 99999999999985 56666666667777888888888877766543
|
|
| >cd03785 GT1_MurG MurG is an N-acetylglucosaminyltransferase, the last enzyme involved in the intracellular phase of peptidoglycan biosynthesis | Back alignment and domain information |
|---|
Probab=99.18 E-value=1.6e-09 Score=120.90 Aligned_cols=249 Identities=16% Similarity=0.159 Sum_probs=149.4
Q ss_pred HHHHHHHcCCCCCEEEEeCcccchHHHHHHhhcCCCeEEEEEccCCCChHHHhcCCchHHHHHHhHhCCEEcccCHHHHH
Q 003025 190 SQRVIEVINPEDDYVWIHDYHLMVLPTFLRRRFTRLRMGFFLHSPFPSSEIYRTLPVREEILKALLNADLIGFHTFDYAR 269 (856)
Q Consensus 190 a~~i~~~~~~~~D~VwihDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~~~~lp~r~eil~~ll~~dligf~t~~~~~ 269 (856)
+.++++..+| |+|+.|.... .++..+..+..++|+.++-|..||.. . +.++ ...+|.|...+....+
T Consensus 81 ~~~~i~~~~p--DvI~~~~~~~-~~~~~~~a~~~~~p~v~~~~~~~~~~--~------~~~~--~~~~~~vi~~s~~~~~ 147 (350)
T cd03785 81 ARKILKKFKP--DVVVGFGGYV-SGPVGLAAKLLGIPLVIHEQNAVPGL--A------NRLL--ARFADRVALSFPETAK 147 (350)
T ss_pred HHHHHHhcCC--CEEEECCCCc-chHHHHHHHHhCCCEEEEcCCCCccH--H------HHHH--HHhhCEEEEcchhhhh
Confidence 3455566677 8999986544 34444545555778877666555421 0 1111 1125666555432221
Q ss_pred HHHHHHHhhhCceecccCceeeEEECCEEEEEEEeecccCchHHHHHhcCchHHHHHHHHHHHc---CCCeEEEeccCcc
Q 003025 270 HFLSCCSRMLGLEYQSKRGYIGLEYYGRTVGIKIMPVGIHMGQIESVLRLADKDWRVQELKQQF---EGKTVLLGVDDMD 346 (856)
Q Consensus 270 ~Fl~~~~r~lg~~~~~~~~~~~~~~~gr~~~i~i~p~GId~~~~~~~~~~~~~~~~~~~l~~~~---~~k~iil~VdRld 346 (856)
. + ...++.++|+|+|...+... + . ++++ +++++|+.+++..
T Consensus 148 ~-----------------------~--~~~~~~~i~n~v~~~~~~~~---~----~----~~~~~~~~~~~~i~~~~g~~ 191 (350)
T cd03785 148 Y-----------------------F--PKDKAVVTGNPVREEILALD---R----E----RARLGLRPGKPTLLVFGGSQ 191 (350)
T ss_pred c-----------------------C--CCCcEEEECCCCchHHhhhh---h----h----HHhcCCCCCCeEEEEECCcH
Confidence 1 0 11245678999998766421 1 1 2232 4677888888877
Q ss_pred ccCCHHHHH-HHHHHHHHhCCCCcCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCcccEEEEcCCCCHHH
Q 003025 347 IFKGVDLKL-LAMEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDKPVTLSE 425 (856)
Q Consensus 347 ~~KGi~~~l-~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~~~~lv~~IN~~~~~~~~~pvv~~~~~v~~~e 425 (856)
..|+...++ .|++.+.+ ++ +.++.++. ++ +.+++++.++++ + +.+.+.+.+ ++
T Consensus 192 ~~~~~~~~l~~a~~~l~~--~~----~~~~~i~G----~g-~~~~l~~~~~~~--------~-----~~v~~~g~~--~~ 245 (350)
T cd03785 192 GARAINEAVPEALAELLR--KR----LQVIHQTG----KG-DLEEVKKAYEEL--------G-----VNYEVFPFI--DD 245 (350)
T ss_pred hHHHHHHHHHHHHHHhhc--cC----eEEEEEcC----Cc-cHHHHHHHHhcc--------C-----CCeEEeehh--hh
Confidence 788876554 77776642 22 33333331 22 334444433221 1 123345544 78
Q ss_pred HHHHHHhcceeeeccccccCCCcccceeeeecCCCCCCCCCCCCCCCCceEEecCCcc--------ccccc---CCceee
Q 003025 426 RAAYYTIAECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIG--------CSPSL---SGAIRV 494 (856)
Q Consensus 426 l~aly~~ADv~vvtS~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~g~lV~Se~~G--------~~~~l---~~al~V 494 (856)
+..+|+.||++|.+| | +.+.+|||+|+. |+|++...| .++.+ ..|++|
T Consensus 246 ~~~~l~~ad~~v~~s---g-~~t~~Eam~~G~-----------------Pvv~~~~~~~~~~~~~~~~~~l~~~g~g~~v 304 (350)
T cd03785 246 MAAAYAAADLVISRA---G-ASTVAELAALGL-----------------PAILIPLPYAADDHQTANARALVKAGAAVLI 304 (350)
T ss_pred HHHHHHhcCEEEECC---C-HhHHHHHHHhCC-----------------CEEEeecCCCCCCcHHHhHHHHHhCCCEEEE
Confidence 999999999999876 3 478999999965 888876543 12344 237899
Q ss_pred CCC--CHHHHHHHHHHHHcCCHHHHHHHHHHHhhhhhcCCHHH
Q 003025 495 NPW--NIEATAEAMHEAIQMNEAEKQLRHEKHYRYVSTHDVAY 535 (856)
Q Consensus 495 nP~--d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~ 535 (856)
++. |.++++++|.+++. +++.++...++.++++..+...+
T Consensus 305 ~~~~~~~~~l~~~i~~ll~-~~~~~~~~~~~~~~~~~~~~~~~ 346 (350)
T cd03785 305 PQEELTPERLAAALLELLS-DPERLKAMAEAARSLARPDAAER 346 (350)
T ss_pred ecCCCCHHHHHHHHHHHhc-CHHHHHHHHHHHHhcCCCCHHHH
Confidence 987 89999999999996 45555555666677766554443
|
It transfers N-acetyl-D-glucosamine (GlcNAc) from UDP-GlcNAc to the C4 hydroxyl of a lipid-linked N-acetylmuramoyl pentapeptide (NAM). The resulting disaccharide is then transported across the cell membrane, where it is polymerized into NAG-NAM cell-wall repeat structure. MurG belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains, each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. |
| >TIGR00236 wecB UDP-N-acetylglucosamine 2-epimerase | Back alignment and domain information |
|---|
Probab=99.15 E-value=3.5e-09 Score=119.37 Aligned_cols=251 Identities=14% Similarity=0.118 Sum_probs=145.2
Q ss_pred HHHHHHHHHHcCCCCCEEEEeCcccchHHHHHHhhcCCCeEEEEEccCCCChHHHhcCCchHHHHHHhH--hCCEEcccC
Q 003025 187 KIFSQRVIEVINPEDDYVWIHDYHLMVLPTFLRRRFTRLRMGFFLHSPFPSSEIYRTLPVREEILKALL--NADLIGFHT 264 (856)
Q Consensus 187 ~~fa~~i~~~~~~~~D~VwihDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~~~~lp~r~eil~~ll--~~dligf~t 264 (856)
..|++ +++..+| |+|++|......+...+-.+..++|++..-+-- -+.+.+. |+.+++.+-+. .||++--.+
T Consensus 76 ~~l~~-~l~~~~p--Div~~~gd~~~~la~a~aa~~~~ipv~h~~~g~-~s~~~~~--~~~~~~~r~~~~~~ad~~~~~s 149 (365)
T TIGR00236 76 EGLEE-LLLEEKP--DIVLVQGDTTTTLAGALAAFYLQIPVGHVEAGL-RTGDRYS--PMPEEINRQLTGHIADLHFAPT 149 (365)
T ss_pred HHHHH-HHHHcCC--CEEEEeCCchHHHHHHHHHHHhCCCEEEEeCCC-CcCCCCC--CCccHHHHHHHHHHHHhccCCC
Confidence 44444 3455677 999999655554544443444577886432210 0111111 22233322221 257766677
Q ss_pred HHHHHHHHHHHHhhhCceecccCceeeEEECCEEEEEEEeeccc-CchHHHHHhcCchHHHHHHHHHHHcC-C-CeEEEe
Q 003025 265 FDYARHFLSCCSRMLGLEYQSKRGYIGLEYYGRTVGIKIMPVGI-HMGQIESVLRLADKDWRVQELKQQFE-G-KTVLLG 341 (856)
Q Consensus 265 ~~~~~~Fl~~~~r~lg~~~~~~~~~~~~~~~gr~~~i~i~p~GI-d~~~~~~~~~~~~~~~~~~~l~~~~~-~-k~iil~ 341 (856)
....+++++ +|.+ ..+|.++++|+ |..... ... + ....+++++. + ..+++.
T Consensus 150 ~~~~~~l~~-----~G~~---------------~~~I~vign~~~d~~~~~-~~~-~----~~~~~~~~~~~~~~~vl~~ 203 (365)
T TIGR00236 150 EQAKDNLLR-----ENVK---------------ADSIFVTGNTVIDALLTN-VEI-A----YSSPVLSEFGEDKRYILLT 203 (365)
T ss_pred HHHHHHHHH-----cCCC---------------cccEEEeCChHHHHHHHH-Hhh-c----cchhHHHhcCCCCCEEEEe
Confidence 766666654 2321 23567788886 432221 111 0 1123444452 2 344455
Q ss_pred ccCcc-ccCCHHHHHHHHHHHHHhCCCCcCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCcccEEEEcCC
Q 003025 342 VDDMD-IFKGVDLKLLAMEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDKP 420 (856)
Q Consensus 342 VdRld-~~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~~~~lv~~IN~~~~~~~~~pvv~~~~~ 420 (856)
..|.. ..||+..+++|+.++.+++|+++ ++.++.|. ++ .+.+ +.+.++ ..+.+.+.+.
T Consensus 204 ~hr~~~~~k~~~~ll~a~~~l~~~~~~~~----~vi~~~~~----~~---~~~~---~~~~~~-------~~~~v~~~~~ 262 (365)
T TIGR00236 204 LHRRENVGEPLENIFKAIREIVEEFEDVQ----IVYPVHLN----PV---VREP---LHKHLG-------DSKRVHLIEP 262 (365)
T ss_pred cCchhhhhhHHHHHHHHHHHHHHHCCCCE----EEEECCCC----hH---HHHH---HHHHhC-------CCCCEEEECC
Confidence 55653 45899999999999998888764 55554332 11 1222 222221 1122445568
Q ss_pred CCHHHHHHHHHhcceeeeccccccCCCcccceeeeecCCCCCCCCCCCCCCCCceEEec-CCccccccc-CC-ceeeCCC
Q 003025 421 VTLSERAAYYTIAECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVS-EFIGCSPSL-SG-AIRVNPW 497 (856)
Q Consensus 421 v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~g~lV~S-e~~G~~~~l-~~-al~VnP~ 497 (856)
++..++..+|+.||+++.+| |.+..||++|+. |+|++ +.+|..+.+ .+ ++++ |.
T Consensus 263 ~~~~~~~~~l~~ad~vv~~S-----g~~~~EA~a~g~-----------------PvI~~~~~~~~~e~~~~g~~~lv-~~ 319 (365)
T TIGR00236 263 LEYLDFLNLAANSHLILTDS-----GGVQEEAPSLGK-----------------PVLVLRDTTERPETVEAGTNKLV-GT 319 (365)
T ss_pred CChHHHHHHHHhCCEEEECC-----hhHHHHHHHcCC-----------------CEEECCCCCCChHHHhcCceEEe-CC
Confidence 88999999999999999888 445799999955 88886 555555554 23 5566 67
Q ss_pred CHHHHHHHHHHHHcCC
Q 003025 498 NIEATAEAMHEAIQMN 513 (856)
Q Consensus 498 d~~~~A~ai~~aL~m~ 513 (856)
|+++++++|.++|+.+
T Consensus 320 d~~~i~~ai~~ll~~~ 335 (365)
T TIGR00236 320 DKENITKAAKRLLTDP 335 (365)
T ss_pred CHHHHHHHHHHHHhCh
Confidence 9999999999999743
|
Epimerase activity was also demonstrated in a bifunctional rat enzyme, for which the N-terminal domain appears to be orthologous. The set of proteins found above the suggested cutoff includes E. coli WecB in one of two deeply branched clusters and the rat UDP-N-acetylglucosamine 2-epimerase domain in the other. |
| >TIGR01133 murG undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase | Back alignment and domain information |
|---|
Probab=99.10 E-value=2.4e-09 Score=119.45 Aligned_cols=181 Identities=16% Similarity=0.132 Sum_probs=116.5
Q ss_pred EEeecccCchHHHHHhcCchHHHHHHHHHHHcCCCeEEEeccCccccCCHHHH-HHHHHHHHHhCCCCcCceEEEEEecC
Q 003025 302 KIMPVGIHMGQIESVLRLADKDWRVQELKQQFEGKTVLLGVDDMDIFKGVDLK-LLAMEHLLKQHPKWQGRAVLVQIANP 380 (856)
Q Consensus 302 ~i~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~k~iil~VdRld~~KGi~~~-l~A~~~ll~~~p~~~~~vvLvqi~~p 380 (856)
.++|+|++...+... +. ..++ ..-+++++|++++|....|++... +.|++++.+. +++ ++.++.
T Consensus 153 ~~i~n~v~~~~~~~~---~~----~~~~-~~~~~~~~i~~~gg~~~~~~~~~~l~~a~~~l~~~--~~~----~~~~~g- 217 (348)
T TIGR01133 153 VLVGNPVRQEIRSLP---VP----RERF-GLREGKPTILVLGGSQGAKILNELVPKALAKLAEK--GIQ----IVHQTG- 217 (348)
T ss_pred eEEcCCcCHHHhccc---ch----hhhc-CCCCCCeEEEEECCchhHHHHHHHHHHHHHHHhhc--CcE----EEEECC-
Confidence 568999987654321 00 1111 111467889999998888987654 4788777543 222 333332
Q ss_pred CCCCchhHHHHHHHHHHHHHHHhcccCCCCcccEEEEcCCCCHHHHHHHHHhcceeeeccccccCCCcccceeeeecCCC
Q 003025 381 ARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDKPVTLSERAAYYTIAECVVVTAVRDGMNLTPYEYIVCRQGVS 460 (856)
Q Consensus 381 ~r~~~~~~~~l~~~~~~lv~~IN~~~~~~~~~pvv~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~a~~~~~~ 460 (856)
+++. ++++ +.+.+. +...++.+. . .++..+|+.||++|.+| | +.+.+|||+|+.
T Consensus 218 ---~~~~-~~l~----~~~~~~-------~l~~~v~~~---~-~~~~~~l~~ad~~v~~~---g-~~~l~Ea~~~g~--- 271 (348)
T TIGR01133 218 ---KNDL-EKVK----NVYQEL-------GIEAIVTFI---D-ENMAAAYAAADLVISRA---G-ASTVAELAAAGV--- 271 (348)
T ss_pred ---cchH-HHHH----HHHhhC-------CceEEecCc---c-cCHHHHHHhCCEEEECC---C-hhHHHHHHHcCC---
Confidence 2222 3333 333321 223344343 2 27899999999999865 4 689999999955
Q ss_pred CCCCCCCCCCCCCceEEecCCcccc-------ccc---CCceeeCCCC--HHHHHHHHHHHHcCCHHHHHHHHHHHhhhh
Q 003025 461 GSESSSESSAPKKSMLVVSEFIGCS-------PSL---SGAIRVNPWN--IEATAEAMHEAIQMNEAEKQLRHEKHYRYV 528 (856)
Q Consensus 461 ~~~~~~~~~~~~~g~lV~Se~~G~~-------~~l---~~al~VnP~d--~~~~A~ai~~aL~m~~~er~~r~~~~~~~v 528 (856)
|+|++.+.|.. +.+ ..|++++|.| +++++++|.++++ +++.++.+.++.++++
T Consensus 272 --------------Pvv~~~~~~~~~~~~~~~~~i~~~~~G~~~~~~~~~~~~l~~~i~~ll~-~~~~~~~~~~~~~~~~ 336 (348)
T TIGR01133 272 --------------PAILIPYPYAADDQYYNAKFLEDLGAGLVIRQKELLPEKLLEALLKLLL-DPANLEAMAEAARKLA 336 (348)
T ss_pred --------------CEEEeeCCCCccchhhHHHHHHHCCCEEEEecccCCHHHHHHHHHHHHc-CHHHHHHHHHHHHhcC
Confidence 88888775532 334 2488898876 9999999999996 5566666677788888
Q ss_pred hcCCHHHHHH
Q 003025 529 STHDVAYWAR 538 (856)
Q Consensus 529 ~~~~~~~W~~ 538 (856)
.++...++++
T Consensus 337 ~~~~~~~i~~ 346 (348)
T TIGR01133 337 KPDAAKRIAE 346 (348)
T ss_pred CccHHHHHHh
Confidence 8776666654
|
RL J Bacteriol 1993 Mar;175(6):1841-3 |
| >PRK13608 diacylglycerol glucosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.10 E-value=9.9e-09 Score=116.87 Aligned_cols=168 Identities=11% Similarity=0.077 Sum_probs=111.1
Q ss_pred CeEEEeccCccccCCHHHHHHHHHHHHHhCCCCcCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCcccEE
Q 003025 336 KTVLLGVDDMDIFKGVDLKLLAMEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVV 415 (856)
Q Consensus 336 k~iil~VdRld~~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~~~~lv~~IN~~~~~~~~~pvv 415 (856)
+.++++.||+...||+..+++++ ++..|+++ ++.++. .++ ++.+++.+. .+. ...+
T Consensus 203 ~~ilv~~G~lg~~k~~~~li~~~---~~~~~~~~----~vvv~G----~~~---~l~~~l~~~---~~~------~~~v- 258 (391)
T PRK13608 203 QTILMSAGAFGVSKGFDTMITDI---LAKSANAQ----VVMICG----KSK---ELKRSLTAK---FKS------NENV- 258 (391)
T ss_pred CEEEEECCCcccchhHHHHHHHH---HhcCCCce----EEEEcC----CCH---HHHHHHHHH---hcc------CCCe-
Confidence 34667899999999999999885 34455543 655552 222 222333222 111 0123
Q ss_pred EEcCCCCHHHHHHHHHhcceeeeccccccCCCcccceeeeecCCCCCCCCCCCCCCCCceEEecCCccccccc------C
Q 003025 416 FIDKPVTLSERAAYYTIAECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIGCSPSL------S 489 (856)
Q Consensus 416 ~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l------~ 489 (856)
.+.|.+ +++..+|+.||++|.. +.|++..|||+|+. |+|++...+..+.- .
T Consensus 259 ~~~G~~--~~~~~~~~~aDl~I~k----~gg~tl~EA~a~G~-----------------PvI~~~~~pgqe~~N~~~~~~ 315 (391)
T PRK13608 259 LILGYT--KHMNEWMASSQLMITK----PGGITISEGLARCI-----------------PMIFLNPAPGQELENALYFEE 315 (391)
T ss_pred EEEecc--chHHHHHHhhhEEEeC----CchHHHHHHHHhCC-----------------CEEECCCCCCcchhHHHHHHh
Confidence 355554 5799999999999863 45889999999965 88888543322211 2
Q ss_pred CceeeCCCCHHHHHHHHHHHHcCCHHHHHHHHHHHhhhhhcCCHHHHHHHHHHHHHHHHHhh
Q 003025 490 GAIRVNPWNIEATAEAMHEAIQMNEAEKQLRHEKHYRYVSTHDVAYWARSFFQDMERTCKDH 551 (856)
Q Consensus 490 ~al~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~l~~~~~~~ 551 (856)
.|.-+-+.|.++++++|.++++. ++++..+.++.++....++....++.+++.+...++-+
T Consensus 316 ~G~g~~~~~~~~l~~~i~~ll~~-~~~~~~m~~~~~~~~~~~s~~~i~~~l~~l~~~~~~~~ 376 (391)
T PRK13608 316 KGFGKIADTPEEAIKIVASLTNG-NEQLTNMISTMEQDKIKYATQTICRDLLDLIGHSSQPQ 376 (391)
T ss_pred CCcEEEeCCHHHHHHHHHHHhcC-HHHHHHHHHHHHHhcCCCCHHHHHHHHHHHhhhhhhhh
Confidence 23333366999999999999974 45556666677788888888888888887776655433
|
|
| >cd03786 GT1_UDP-GlcNAc_2-Epimerase Bacterial members of the UDP-N-Acetylglucosamine (GlcNAc) 2-Epimerase family are known to catalyze the reversible interconversion of UDP-GlcNAc and UDP-N-acetylmannosamine (UDP-ManNAc) | Back alignment and domain information |
|---|
Probab=99.08 E-value=9.6e-09 Score=115.30 Aligned_cols=251 Identities=14% Similarity=0.042 Sum_probs=143.5
Q ss_pred HHHHHHHHHHHHcCCCCCEEEEeCcccchHHHHHHhhcCCCeEEEEEcc--CCCChHHHhcCCch--HHHHHHhHhCCEE
Q 003025 185 ANKIFSQRVIEVINPEDDYVWIHDYHLMVLPTFLRRRFTRLRMGFFLHS--PFPSSEIYRTLPVR--EEILKALLNADLI 260 (856)
Q Consensus 185 vN~~fa~~i~~~~~~~~D~VwihDyhl~llp~~lr~~~~~~~i~~flH~--PfP~~e~~~~lp~r--~eil~~ll~~dli 260 (856)
......+.+.+. +| |+|++|++....++..+..+..++|+..+.|- .|- +..|+. ...+. -.+|.+
T Consensus 76 ~~~~l~~~l~~~-~p--DvV~~~g~~~~~~~~~~aa~~~~iPvv~~~~g~~s~~-----~~~~~~~~r~~~~--~~ad~~ 145 (363)
T cd03786 76 LLIGLEAVLLEE-KP--DLVLVLGDTNETLAAALAAFKLGIPVAHVEAGLRSFD-----RGMPDEENRHAID--KLSDLH 145 (363)
T ss_pred HHHHHHHHHHHh-CC--CEEEEeCCchHHHHHHHHHHHcCCCEEEEecccccCC-----CCCCchHHHHHHH--HHhhhc
Confidence 334444445444 77 89999988777676666555567888765541 110 001111 11111 134655
Q ss_pred cccCHHHHHHHHHHHHhhhCceecccCceeeEEECCEEEEEEEeeccc-CchHHHHHhcCchHHHHHHHHHHHc---CCC
Q 003025 261 GFHTFDYARHFLSCCSRMLGLEYQSKRGYIGLEYYGRTVGIKIMPVGI-HMGQIESVLRLADKDWRVQELKQQF---EGK 336 (856)
Q Consensus 261 gf~t~~~~~~Fl~~~~r~lg~~~~~~~~~~~~~~~gr~~~i~i~p~GI-d~~~~~~~~~~~~~~~~~~~l~~~~---~~k 336 (856)
-.-+....+++.+ .|+ ...+|.++++++ |...+..... + ....++.+ .++
T Consensus 146 ~~~s~~~~~~l~~-----~G~---------------~~~kI~vign~v~d~~~~~~~~~-~-----~~~~~~~~~~~~~~ 199 (363)
T cd03786 146 FAPTEEARRNLLQ-----EGE---------------PPERIFVVGNTMIDALLRLLELA-K-----KELILELLGLLPKK 199 (363)
T ss_pred cCCCHHHHHHHHH-----cCC---------------CcccEEEECchHHHHHHHHHHhh-c-----cchhhhhcccCCCC
Confidence 5445444333332 122 223455667664 5433321111 0 01111222 345
Q ss_pred eEEEeccCccc---cCCHHHHHHHHHHHHHhCCCCcCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCccc
Q 003025 337 TVLLGVDDMDI---FKGVDLKLLAMEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEP 413 (856)
Q Consensus 337 ~iil~VdRld~---~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~~~~lv~~IN~~~~~~~~~p 413 (856)
.+++.++|+.. .||+..+++|++++.++ ++.++..+. ++...++++ .+.+.+.. .+
T Consensus 200 ~vlv~~~r~~~~~~~k~~~~l~~al~~l~~~------~~~vi~~~~-----~~~~~~l~~----~~~~~~~~------~~ 258 (363)
T cd03786 200 YILVTLHRVENVDDGEQLEEILEALAELAEE------DVPVVFPNH-----PRTRPRIRE----AGLEFLGH------HP 258 (363)
T ss_pred EEEEEeCCccccCChHHHHHHHHHHHHHHhc------CCEEEEECC-----CChHHHHHH----HHHhhccC------CC
Confidence 67788999875 79999999999988543 244444332 222233333 33332210 12
Q ss_pred EEEEcCCCCHHHHHHHHHhcceeeeccccccCCCcccceeeeecCCCCCCCCCCCCCCCCceEEecCCccccccc-CCce
Q 003025 414 VVFIDKPVTLSERAAYYTIAECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIGCSPSL-SGAI 492 (856)
Q Consensus 414 vv~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l-~~al 492 (856)
.+.+.+....+++..+|+.||++|.+|- | +..|+++|+. |+|++...+..+.+ .+|+
T Consensus 259 ~v~~~~~~~~~~~~~l~~~ad~~v~~Sg----g-i~~Ea~~~g~-----------------PvI~~~~~~~~~~~~~~g~ 316 (363)
T cd03786 259 NVLLISPLGYLYFLLLLKNADLVLTDSG----G-IQEEASFLGV-----------------PVLNLRDRTERPETVESGT 316 (363)
T ss_pred CEEEECCcCHHHHHHHHHcCcEEEEcCc----c-HHhhhhhcCC-----------------CEEeeCCCCccchhhheee
Confidence 3345556678899999999999999984 4 4689999955 88888765544444 4554
Q ss_pred eeCC-CCHHHHHHHHHHHHcCCH
Q 003025 493 RVNP-WNIEATAEAMHEAIQMNE 514 (856)
Q Consensus 493 ~VnP-~d~~~~A~ai~~aL~m~~ 514 (856)
.+.+ .|+++++++|.++++.+.
T Consensus 317 ~~~~~~~~~~i~~~i~~ll~~~~ 339 (363)
T cd03786 317 NVLVGTDPEAILAAIEKLLSDEF 339 (363)
T ss_pred EEecCCCHHHHHHHHHHHhcCch
Confidence 4433 379999999999998553
|
The enzyme serves to produce an activated form of ManNAc residues (UDP-ManNAc) for use in the biosynthesis of a variety of cell surface polysaccharides; The mammalian enzyme is bifunctional, catalyzing both the inversion of stereochemistry at C-2 and the hydrolysis of the UDP-sugar linkage to generate free ManNAc. It also catalyzes the phosphorylation of ManNAc to generate ManNAc 6-phosphate, a precursor to salic acids. In mammals, sialic acids are found at the termini of oligosaccharides in a large variety of cell surface glycoconjugates and are key mediators of cell-cell recognition events. Mutations in human members of this family have been associated with Sialuria, a rare disease caused by the disorders of sialic acid metabolism. This family belongs to the GT-B st |
| >TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family | Back alignment and domain information |
|---|
Probab=99.03 E-value=7.6e-10 Score=109.10 Aligned_cols=73 Identities=25% Similarity=0.229 Sum_probs=58.7
Q ss_pred CHHHHHHHHHHHhhhcCCCcceEEEEeCCchhHHHHHHccccccCCCCCCCccEEEEEeCC--CccccceEcCCh--hH-
Q 003025 757 SKGVVAEKIFTTMAESGRHADFVLCIGDDRSDEDMFEIIGNATSSGVLSSNASVFACTVGQ--KPSKAKYYLDDA--AE- 831 (856)
Q Consensus 757 sKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~--~~s~A~y~l~~~--~e- 831 (856)
+|..+++.+++++ |++++.++++||+.||++|++.+|.. ++|..+. .+..|+|++.++ ++
T Consensus 76 ~k~~~~~~~~~~~---~~~~~~~~~vGDs~~D~~~~~~ag~~------------~~v~~~~~~~~~~a~~i~~~~~~~g~ 140 (154)
T TIGR01670 76 NKLIAFSDILEKL---ALAPENVAYIGDDLIDWPVMEKVGLS------------VAVADAHPLLIPRADYVTRIAGGRGA 140 (154)
T ss_pred chHHHHHHHHHHc---CCCHHHEEEECCCHHHHHHHHHCCCe------------EecCCcCHHHHHhCCEEecCCCCCcH
Confidence 3889999999999 99999999999999999999999863 4444443 257789988754 33
Q ss_pred HHHHHHHHHHhcC
Q 003025 832 VVTMLEALAEASA 844 (856)
Q Consensus 832 V~~~L~~L~~~~~ 844 (856)
+.++++.+...+.
T Consensus 141 ~~~~~~~~~~~~~ 153 (154)
T TIGR01670 141 VREVCELLLLAQG 153 (154)
T ss_pred HHHHHHHHHHhhC
Confidence 9999999887653
|
The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved. |
| >PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.97 E-value=1.7e-09 Score=109.81 Aligned_cols=125 Identities=19% Similarity=0.268 Sum_probs=89.5
Q ss_pred cCCcEEEEEecCCCCCCCC----CCCCCCCHHHH---HHHHHHHhhCCCeEEEecCCChhhHHHhhcCCCCccEEeeCCE
Q 003025 588 RSKSRAILFDYDGTVMPQT----SINKAPSQAVI---SIINTLCNDARNTVFVVSGRGRDCLGKWFSPCKKLGIAAEHGY 660 (856)
Q Consensus 588 ~s~~rlI~~DlDGTLl~~~----~~~~~~s~~~~---~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~~~~lgliaenG~ 660 (856)
...+|+|++|+||||++.. .....++..+. .+++.| +++|+.++|+|||+...+...+..+ ++.. +
T Consensus 18 ~~~ikli~~D~Dgtl~~~~i~~~~~~~~~~~~~~~d~~~i~~L-~~~Gi~v~I~T~~~~~~v~~~l~~l---gl~~---~ 90 (183)
T PRK09484 18 AENIRLLICDVDGVFSDGLIYMGNNGEELKAFNVRDGYGIRCL-LTSGIEVAIITGRKSKLVEDRMTTL---GITH---L 90 (183)
T ss_pred hhCceEEEEcCCeeeecCEEEEcCCCCEEEEEeccchHHHHHH-HHCCCEEEEEeCCCcHHHHHHHHHc---CCce---e
Confidence 3469999999999999720 01333333333 678886 6789999999999998888877432 1100 0
Q ss_pred EEEeCCCcceEecCCCCcccHHHHHHHHHHHHhhcCCcceEEecccceEEeeecCCCCCCchhHHHHHHHHHHHhcCCCe
Q 003025 661 FMRWSADEEWQNCGQSVDFGWIQIAEPVMKLYTESTDGSYIEIKESALVWHHRDADPGFGSSQAKELLDHLESVLANEPA 740 (856)
Q Consensus 661 ~I~~~~~~~w~~~~~~~~~~w~~~v~~i~~~~~~~~~Gs~ie~k~~~l~~~~~~~dp~~~~~~a~el~~~L~~~l~~~~~ 740 (856)
+ .|
T Consensus 91 f-----------------------------------~g------------------------------------------ 93 (183)
T PRK09484 91 Y-----------------------------------QG------------------------------------------ 93 (183)
T ss_pred e-----------------------------------cC------------------------------------------
Confidence 0 00
Q ss_pred EEEEcCeEEEEEeCCCCHHHHHHHHHHHhhhcCCCcceEEEEeCCchhHHHHHHccccccCCCCCCCccEEEEEeCCC--
Q 003025 741 AVKSGQFIVEVKPQGVSKGVVAEKIFTTMAESGRHADFVLCIGDDRSDEDMFEIIGNATSSGVLSSNASVFACTVGQK-- 818 (856)
Q Consensus 741 ~v~~g~~~vEI~p~gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~-- 818 (856)
.-+|..+++.+++++ |++++++++|||+.||++|++.+|.. +.+++.
T Consensus 94 --------------~~~k~~~l~~~~~~~---gl~~~ev~~VGDs~~D~~~a~~aG~~--------------~~v~~~~~ 142 (183)
T PRK09484 94 --------------QSNKLIAFSDLLEKL---AIAPEQVAYIGDDLIDWPVMEKVGLS--------------VAVADAHP 142 (183)
T ss_pred --------------CCcHHHHHHHHHHHh---CCCHHHEEEECCCHHHHHHHHHCCCe--------------EecCChhH
Confidence 012668889999999 99999999999999999999999963 345553
Q ss_pred --ccccceEcC
Q 003025 819 --PSKAKYYLD 827 (856)
Q Consensus 819 --~s~A~y~l~ 827 (856)
...|+|++.
T Consensus 143 ~~~~~a~~v~~ 153 (183)
T PRK09484 143 LLLPRADYVTR 153 (183)
T ss_pred HHHHhCCEEec
Confidence 356788885
|
|
| >PF13692 Glyco_trans_1_4: Glycosyl transferases group 1; PDB: 3OY2_A 3OY7_B 2Q6V_A 2HY7_A 3CV3_A 3CUY_A | Back alignment and domain information |
|---|
Probab=98.86 E-value=3.9e-09 Score=100.94 Aligned_cols=128 Identities=20% Similarity=0.242 Sum_probs=88.8
Q ss_pred CeEEEeccCccccCCHHHHHH-HHHHHHHhCCCCcCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCcccE
Q 003025 336 KTVLLGVDDMDIFKGVDLKLL-AMEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPV 414 (856)
Q Consensus 336 k~iil~VdRld~~KGi~~~l~-A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~~~~lv~~IN~~~~~~~~~pv 414 (856)
..++++.|++...||+..+++ |++++.+++|++ .|+.+|... + ++.++ .. ..|
T Consensus 2 ~~~i~~~g~~~~~k~~~~li~~~~~~l~~~~p~~----~l~i~G~~~-----~------~l~~~-~~----------~~v 55 (135)
T PF13692_consen 2 ILYIGYLGRIRPDKGLEELIEAALERLKEKHPDI----ELIIIGNGP-----D------ELKRL-RR----------PNV 55 (135)
T ss_dssp -EEEE--S-SSGGGTHHHHHH-HHHHHHHHSTTE----EEEEECESS------------HHCCH-HH----------CTE
T ss_pred cccccccccccccccccchhhhHHHHHHHHCcCE----EEEEEeCCH-----H------HHHHh-cC----------CCE
Confidence 357899999999999999999 999999999964 488787532 2 12222 11 124
Q ss_pred EEEcCCCCHHHHHHHHHhcceeeeccc-cccCCCcccceeeeecCCCCCCCCCCCCCCCCceEEecCCcccccccC---C
Q 003025 415 VFIDKPVTLSERAAYYTIAECVVVTAV-RDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIGCSPSLS---G 490 (856)
Q Consensus 415 v~~~~~v~~~el~aly~~ADv~vvtS~-~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~ 490 (856)
. +.+.+ +|+.++|+.||+++.|+. .++++...+|||+++. |+|+|.. |+...+. .
T Consensus 56 ~-~~g~~--~e~~~~l~~~dv~l~p~~~~~~~~~k~~e~~~~G~-----------------pvi~~~~-~~~~~~~~~~~ 114 (135)
T PF13692_consen 56 R-FHGFV--EELPEILAAADVGLIPSRFNEGFPNKLLEAMAAGK-----------------PVIASDN-GAEGIVEEDGC 114 (135)
T ss_dssp E-EE-S---HHHHHHHHC-SEEEE-BSS-SCC-HHHHHHHCTT-------------------EEEEHH-HCHCHS---SE
T ss_pred E-EcCCH--HHHHHHHHhCCEEEEEeeCCCcCcHHHHHHHHhCC-----------------CEEECCc-chhhheeecCC
Confidence 4 45566 689999999999999984 7899999999999955 9999988 6666552 3
Q ss_pred ceeeCCCCHHHHHHHHHHHHc
Q 003025 491 AIRVNPWNIEATAEAMHEAIQ 511 (856)
Q Consensus 491 al~VnP~d~~~~A~ai~~aL~ 511 (856)
++.+ +.|+++++++|.++++
T Consensus 115 ~~~~-~~~~~~l~~~i~~l~~ 134 (135)
T PF13692_consen 115 GVLV-ANDPEELAEAIERLLN 134 (135)
T ss_dssp EEE--TT-HHHHHHHHHHHHH
T ss_pred eEEE-CCCHHHHHHHHHHHhc
Confidence 6666 8899999999999885
|
|
| >TIGR02094 more_P_ylases alpha-glucan phosphorylases | Back alignment and domain information |
|---|
Probab=98.86 E-value=4.1e-07 Score=107.90 Aligned_cols=182 Identities=13% Similarity=0.141 Sum_probs=118.8
Q ss_pred CCCeEEEeccCccccCCHHHHHHHHHHHHH--hCCCCcCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCc
Q 003025 334 EGKTVLLGVDDMDIFKGVDLKLLAMEHLLK--QHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGY 411 (856)
Q Consensus 334 ~~k~iil~VdRld~~KGi~~~l~A~~~ll~--~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~~~~lv~~IN~~~~~~~~ 411 (856)
++..++..|.|+...||+.+++.+++++++ ++|+. .+.+|..|...-.+... .++.+.+.+++++ -.|. +
T Consensus 387 pd~~~ig~v~Rl~~yKr~dLil~~i~~l~~i~~~~~~--pvq~V~~Gka~p~d~~g-k~~i~~i~~la~~--~~~~--~- 458 (601)
T TIGR02094 387 PDVLTIGFARRFATYKRADLIFRDLERLARILNNPER--PVQIVFAGKAHPADGEG-KEIIQRIVEFSKR--PEFR--G- 458 (601)
T ss_pred CCCcEEEEEEcchhhhhHHHHHHHHHHHHHHhhCCCC--CeEEEEEEecCcccchH-HHHHHHHHHHHhc--ccCC--C-
Confidence 356689999999999999999999999986 55552 46777777543222211 3455555555442 0121 1
Q ss_pred ccEEEEcCCCCHHHHHHHHHhcceeee-ccc-cccCCCcccceeeeecCCCCCCCCCCCCCCCCceEEecCCccccccc-
Q 003025 412 EPVVFIDKPVTLSERAAYYTIAECVVV-TAV-RDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIGCSPSL- 488 (856)
Q Consensus 412 ~pvv~~~~~v~~~el~aly~~ADv~vv-tS~-~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l- 488 (856)
.|+++. ..+..--..+|..||+++. ||. .|.-|+.-+-||.- |.|-.|-.-|...+.
T Consensus 459 -kv~f~~-~Yd~~lA~~i~aG~Dv~L~~Psr~~EacGtsqMka~~n------------------GgL~~sv~DG~~~E~~ 518 (601)
T TIGR02094 459 -RIVFLE-NYDINLARYLVSGVDVWLNNPRRPLEASGTSGMKAAMN------------------GVLNLSILDGWWGEGY 518 (601)
T ss_pred -CEEEEc-CCCHHHHHHHhhhheeEEeCCCCCcCCchHHHHHHHHc------------------CCceeecccCcccccC
Confidence 355555 3455555578999999999 777 89999988888873 456666666655444
Q ss_pred --CCceeeCC------------CCHHHHHHHHHHHHc----C------CHHHHHHHHHHHhhhhhcCCHHHHHHHHHHH
Q 003025 489 --SGAIRVNP------------WNIEATAEAMHEAIQ----M------NEAEKQLRHEKHYRYVSTHDVAYWARSFFQD 543 (856)
Q Consensus 489 --~~al~VnP------------~d~~~~A~ai~~aL~----m------~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~ 543 (856)
.+|+.+.+ .|.+++-++|.+++- . |..-.+.+.+.+......+++.+-++++...
T Consensus 519 ~~~nGf~f~~~~~~~~~~~~d~~da~~l~~~L~~ai~~~yy~~~~~~~p~~W~~~~k~am~~~~~~fsw~r~a~~Y~~~ 597 (601)
T TIGR02094 519 DGDNGWAIGDGEEYDDEEEQDRLDAEALYDLLENEVIPLYYDRDEKGIPADWVEMMKESIATIAPRFSTNRMVREYVDK 597 (601)
T ss_pred CCCcEEEECCCccccccccccCCCHHHHHHHHHHHHHHHHhcCCcccCcHHHHHHHHHHHhccCCCCCHHHHHHHHHHH
Confidence 34888875 899999999988772 1 1112223333333334457888877777653
|
This family consists of known phosphorylases, and homologs believed to share the function of using inorganic phosphate to cleave an alpha 1,4 linkage between the terminal glucose residue and the rest of the polymer (maltodextrin, glycogen, etc.). The name of the glucose storage polymer substrate, and therefore the name of this enzyme, depends on the chain lengths and branching patterns. A number of the members of this family have been shown to operate on small maltodextrins, as may be obtained by utilization of exogenous sources. This family represents a distinct clade from the related family modeled by TIGR02093/PF00343. |
| >PRK00025 lpxB lipid-A-disaccharide synthase; Reviewed | Back alignment and domain information |
|---|
Probab=98.83 E-value=1.9e-07 Score=105.78 Aligned_cols=133 Identities=17% Similarity=0.168 Sum_probs=88.6
Q ss_pred CCeE-EEe-ccCccccCC-HHHHHHHHHHHHHhCCCCcCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCc
Q 003025 335 GKTV-LLG-VDDMDIFKG-VDLKLLAMEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGY 411 (856)
Q Consensus 335 ~k~i-il~-VdRld~~KG-i~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~~~~lv~~IN~~~~~~~~ 411 (856)
++++ ++. -+|....|+ +...++|++.+.+++|+++ +++++. +++.. +++++++.+. + +.
T Consensus 185 ~~~~il~~~gsr~~~~~~~~~~l~~a~~~l~~~~~~~~----~ii~~~----~~~~~----~~~~~~~~~~----~--~~ 246 (380)
T PRK00025 185 DARVLALLPGSRGQEIKRLLPPFLKAAQLLQQRYPDLR----FVLPLV----NPKRR----EQIEEALAEY----A--GL 246 (380)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHhCCCeE----EEEecC----ChhhH----HHHHHHHhhc----C--CC
Confidence 4444 333 357766554 6789999999988888654 666542 12222 3333333321 0 11
Q ss_pred ccEEEEcCCCCHHHHHHHHHhcceeeeccccccCCCcccceeeeecCCCCCCCCCCCCCCCCceEEec------------
Q 003025 412 EPVVFIDKPVTLSERAAYYTIAECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVS------------ 479 (856)
Q Consensus 412 ~pvv~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~g~lV~S------------ 479 (856)
.+.++. .++..+|+.||+++.+| |.+.+|+|+|+. |+|++
T Consensus 247 -~v~~~~-----~~~~~~~~~aDl~v~~s-----G~~~lEa~a~G~-----------------PvI~~~~~~~~~~~~~~ 298 (380)
T PRK00025 247 -EVTLLD-----GQKREAMAAADAALAAS-----GTVTLELALLKV-----------------PMVVGYKVSPLTFWIAK 298 (380)
T ss_pred -CeEEEc-----ccHHHHHHhCCEEEECc-----cHHHHHHHHhCC-----------------CEEEEEccCHHHHHHHH
Confidence 133333 37899999999999998 678889999955 78876
Q ss_pred -----CCcccccccCC-----ceeeCCCCHHHHHHHHHHHHcCC
Q 003025 480 -----EFIGCSPSLSG-----AIRVNPWNIEATAEAMHEAIQMN 513 (856)
Q Consensus 480 -----e~~G~~~~l~~-----al~VnP~d~~~~A~ai~~aL~m~ 513 (856)
.+.|..+.+.+ +++++..|++++++++.+.|+.+
T Consensus 299 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~i~~ll~~~ 342 (380)
T PRK00025 299 RLVKVPYVSLPNLLAGRELVPELLQEEATPEKLARALLPLLADG 342 (380)
T ss_pred HHHcCCeeehHHHhcCCCcchhhcCCCCCHHHHHHHHHHHhcCH
Confidence 45555565532 36778889999999999999844
|
|
| >KOG3189 consensus Phosphomannomutase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.81 E-value=6.6e-08 Score=94.91 Aligned_cols=202 Identities=17% Similarity=0.226 Sum_probs=134.2
Q ss_pred HHHcCCcEEEEEecCCCCCCCCCCCCCCCHHHHHHHHHHHhhCCCeEEEecCCChhhHHHhhcC--CCC-ccEEeeCCEE
Q 003025 585 AYLRSKSRAILFDYDGTVMPQTSINKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSP--CKK-LGIAAEHGYF 661 (856)
Q Consensus 585 ~y~~s~~rlI~~DlDGTLl~~~~~~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~--~~~-lgliaenG~~ 661 (856)
++++-..-|+++|.||||.+ ...++++++.+.|++| + +...+.++-|-..+.+.+.++. +.. ....+|||.+
T Consensus 5 a~~r~~~~l~lfdvdgtLt~---~r~~~~~e~~~~l~~l-r-~~v~ig~VggsDl~k~~eqlG~~Vl~~fDY~F~ENGl~ 79 (252)
T KOG3189|consen 5 AAARDEETLCLFDVDGTLTP---PRQKVTPEMLEFLQKL-R-KKVTIGFVGGSDLSKQQEQLGDNVLEEFDYVFSENGLV 79 (252)
T ss_pred hhhcCCceEEEEecCCcccc---ccccCCHHHHHHHHHH-h-hheEEEEeecHHHHHHHHHhchhHHhhhcccccCCCee
Confidence 45555667999999999999 8899999999999997 3 4789999999998888777743 122 2345799987
Q ss_pred EEeCCCcce-EecCCCCc-ccHHHHHHHHHHHHhh----cCCcceEEecccceEEee--ecCCCC----CC-----chhH
Q 003025 662 MRWSADEEW-QNCGQSVD-FGWIQIAEPVMKLYTE----STDGSYIEIKESALVWHH--RDADPG----FG-----SSQA 724 (856)
Q Consensus 662 I~~~~~~~w-~~~~~~~~-~~w~~~v~~i~~~~~~----~~~Gs~ie~k~~~l~~~~--~~~dp~----~~-----~~~a 724 (856)
-+..|...- +.+..... ..+++.+.-.+.+..+ ...|.++|.++..+.... +++..+ |. ...-
T Consensus 80 ~yk~gk~~~~Qsi~~~LGee~~q~liNF~LrYlsdidlPiKRGtFiEFRNgMiNvsPIGR~cs~EER~eF~e~Dkk~~iR 159 (252)
T KOG3189|consen 80 AYKGGKLLSKQSIINHLGEEKLQELINFCLRYLSDIDLPIKRGTFIEFRNGMINVSPIGRNCSQEERNEFEELDKKHKIR 159 (252)
T ss_pred EeeCCcchhHHHHHHHHhHHHHHHHHHHHHHHHHhcCCcccccceEEecCCceeccccccccCHHHHHHHHHhhhhhhhH
Confidence 766554221 11111111 1122222223344433 234899998876665442 222111 11 1112
Q ss_pred HHHHHHHHHHhcCCC-eEEEEcCeEEEEEeCCCCHHHHHHHHHHHhhhcCCCcceEEEEeC----CchhHHHHHHccc
Q 003025 725 KELLDHLESVLANEP-AAVKSGQFIVEVKPQGVSKGVVAEKIFTTMAESGRHADFVLCIGD----DRSDEDMFEIIGN 797 (856)
Q Consensus 725 ~el~~~L~~~l~~~~-~~v~~g~~~vEI~p~gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD----~~ND~~Mf~~ag~ 797 (856)
+.+.+.|++.++++. ...+.|...++|.|.|++|-.-++.+-+. ..+.+-.||| +.||.++|..-.+
T Consensus 160 ~K~v~~Lr~~F~~~gLtFSIGGQISfDvFP~GWDKtyCLqhle~d------gf~~IhFFGDkT~~GGNDyEIf~dprt 231 (252)
T KOG3189|consen 160 EKFVEALREEFADYGLTFSIGGQISFDVFPKGWDKTYCLQHLEKD------GFDTIHFFGDKTMPGGNDYEIFADPRT 231 (252)
T ss_pred HHHHHHHHHHhcccCeeEEECCeEEEeecCCCcchhHHHHHhhhc------CCceEEEeccccCCCCCcceeeeCCcc
Confidence 446677778888776 45567788999999999999988887653 3689999999 6799999876543
|
|
| >PF03332 PMM: Eukaryotic phosphomannomutase; InterPro: IPR005002 This enzyme (5 | Back alignment and domain information |
|---|
Probab=98.81 E-value=3.1e-08 Score=100.62 Aligned_cols=192 Identities=16% Similarity=0.246 Sum_probs=125.6
Q ss_pred HHHHHHHHhhCCCeEEEecCCChhhHHHhhc-C-C-C-CccEEeeCCEEEEeCCCcceEecCCC-C-cccHHHHHHHHHH
Q 003025 617 ISIINTLCNDARNTVFVVSGRGRDCLGKWFS-P-C-K-KLGIAAEHGYFMRWSADEEWQNCGQS-V-DFGWIQIAEPVMK 690 (856)
Q Consensus 617 ~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~-~-~-~-~lgliaenG~~I~~~~~~~w~~~~~~-~-~~~w~~~v~~i~~ 690 (856)
.+.|++| . +...|.|+||-.+..+++.+. . + . -..+.++||...+..+...|...+.. . +...++.+.-++.
T Consensus 2 ~~~L~~L-~-~~~~vgvVgGsd~~k~~eQl~~~~~~~~fdy~f~enG~~~y~~~~~~~~~~~~~~lgee~~~~~in~~l~ 79 (220)
T PF03332_consen 2 AELLQKL-R-KKVPVGVVGGSDLPKIQEQLGGDDVLDNFDYVFPENGLVAYKNGELIWSQSIAEFLGEEKLQKLINFCLR 79 (220)
T ss_dssp HHHHHHH-H-TTSEEEEEESS-HHHHHHHHSTTTHHHH-SEEEEGGGTEEEETTEEEEE--HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHH-H-hcCeEEEEcchhHHHHHHHHcccchHhhCCeeecCCCCeEEECCCchhhHhHHHHcCHHHHHHHHHHHHH
Confidence 5678887 3 479999999999998888884 2 1 1 23578999999998888888654311 1 1112233333333
Q ss_pred HHhh----cCCcceEEecccceEEee--ecCCCC----CCc-----hhHHHHHHHHHHHhcCCCe-EEEEcCeEEEEEeC
Q 003025 691 LYTE----STDGSYIEIKESALVWHH--RDADPG----FGS-----SQAKELLDHLESVLANEPA-AVKSGQFIVEVKPQ 754 (856)
Q Consensus 691 ~~~~----~~~Gs~ie~k~~~l~~~~--~~~dp~----~~~-----~~a~el~~~L~~~l~~~~~-~v~~g~~~vEI~p~ 754 (856)
+..+ ...|.++|.+...+.+.- +++..+ |.. ..-+.+.+.|.+.+++..+ ....|...++|.|+
T Consensus 80 ~~~~l~lp~krGtfIE~R~gmIn~SpiGr~a~~eer~~f~~~D~~~~iR~~~v~~L~~~f~d~~L~~siGGqiSiDvfp~ 159 (220)
T PF03332_consen 80 YISDLDLPVKRGTFIEFRGGMINFSPIGRNASQEERDEFDEYDKKHKIREKLVEALKKEFPDFGLTFSIGGQISIDVFPK 159 (220)
T ss_dssp HHHT---S---S-SEEEESSEEEE-SS-TTS-HHHHHHHHHHHHHHTHHHHHHHHHHHHTCCCSEEEEEETTTEEEEEET
T ss_pred HHHhCCCCccCCCceeecCCcEEECcccCcCCHHHHHhhhhcChhhhHHHHHHHHHHHHCCCCceEEecCCceEEccccC
Confidence 3332 234899999998887763 222110 100 0113466777777877665 45678899999999
Q ss_pred CCCHHHHHHHHHHHhhhcCCCcceEEEEeC----CchhHHHHHHccccccCCCCCCCccEEEEEeCCCccccceEcCChh
Q 003025 755 GVSKGVVAEKIFTTMAESGRHADFVLCIGD----DRSDEDMFEIIGNATSSGVLSSNASVFACTVGQKPSKAKYYLDDAA 830 (856)
Q Consensus 755 gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD----~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~~s~A~y~l~~~~ 830 (856)
|++|..++++|.+. ..+++++||| +.||.|+|...+. .+.+ |.+|+
T Consensus 160 GwDKty~Lr~l~~~------~~~~I~FfGDkt~pGGNDyei~~~~rt-------------~g~~-----------V~~p~ 209 (220)
T PF03332_consen 160 GWDKTYCLRHLEDE------GFDEIHFFGDKTFPGGNDYEIFEDPRT-------------IGHT-----------VTSPE 209 (220)
T ss_dssp T-SGGGGGGGTTTT------T-SEEEEEESS-STTSTTHHHHHSTTS-------------EEEE------------SSHH
T ss_pred CccHHHHHHHHHhc------ccceEEEEehhccCCCCCceeeecCCc-------------cEEE-----------eCCHH
Confidence 99999999998653 2699999999 6899999998765 3444 37899
Q ss_pred HHHHHHHHHH
Q 003025 831 EVVTMLEALA 840 (856)
Q Consensus 831 eV~~~L~~L~ 840 (856)
+.++.|+.|.
T Consensus 210 DT~~~l~~l~ 219 (220)
T PF03332_consen 210 DTIKQLKELF 219 (220)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHh
Confidence 9999988875
|
4.2.8 from EC) is involved in the synthesis of the GDP-mannose and dolichol-phosphate-mannose required for a number of critical mannosyl transfer reactions.; GO: 0004615 phosphomannomutase activity, 0019307 mannose biosynthetic process, 0005737 cytoplasm; PDB: 2I55_B 2I54_C 3F9R_A 2FUE_A 2FUC_A 2AMY_A 2Q4R_A. |
| >KOG1387 consensus Glycosyltransferase [Cell wall/membrane/envelope biogenesis] | Back alignment and domain information |
|---|
Probab=98.80 E-value=1.2e-07 Score=100.47 Aligned_cols=313 Identities=16% Similarity=0.225 Sum_probs=189.6
Q ss_pred HhHHHHHHHHHHHHHHHHH-----HcCCCCCEEEEe--CcccchHHHHHHhhcCCCeEEEEEccCCCChHHHhcCCchHH
Q 003025 177 SLWEAYVSANKIFSQRVIE-----VINPEDDYVWIH--DYHLMVLPTFLRRRFTRLRMGFFLHSPFPSSEIYRTLPVREE 249 (856)
Q Consensus 177 ~~w~~Y~~vN~~fa~~i~~-----~~~~~~D~Vwih--Dyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~~~~lp~r~e 249 (856)
..|..+--.-|..+..|+. .+.| | |||- .|-+. .|.+-| +.+.|||-+.|-|--|.+....+-.|++
T Consensus 124 ~~~~hfTllgQaigsmIl~~Eai~r~~P--d-i~IDtMGY~fs-~p~~r~--l~~~~V~aYvHYP~iS~DML~~l~qrq~ 197 (465)
T KOG1387|consen 124 STWKHFTLLGQAIGSMILAFEAIIRFPP--D-IFIDTMGYPFS-YPIFRR--LRRIPVVAYVHYPTISTDMLKKLFQRQK 197 (465)
T ss_pred ccccceehHHHHHHHHHHHHHHHHhCCc--h-heEecCCCcch-hHHHHH--HccCceEEEEecccccHHHHHHHHhhhh
Confidence 3344444444554444431 1234 3 7774 45443 343333 6689999999988777776655444321
Q ss_pred HHHHhHhCCEEcccCHHHHHHHHHH------HHhhhCceecccCceeeEEECCEEEEEEEeecccCchHHHHHhcCchHH
Q 003025 250 ILKALLNADLIGFHTFDYARHFLSC------CSRMLGLEYQSKRGYIGLEYYGRTVGIKIMPVGIHMGQIESVLRLADKD 323 (856)
Q Consensus 250 il~~ll~~dligf~t~~~~~~Fl~~------~~r~lg~~~~~~~~~~~~~~~gr~~~i~i~p~GId~~~~~~~~~~~~~~ 323 (856)
- + +...----|-|-|..- |....-++..=.+.+|.--+..+++.| ++|+. +.+.+++...+
T Consensus 198 s--~-----~l~~~KlaY~rlFa~lY~~~G~~ad~vm~NssWT~nHI~qiW~~~~~~i-VyPPC-~~e~lks~~~t---- 264 (465)
T KOG1387|consen 198 S--G-----ILVWGKLAYWRLFALLYQSAGSKADIVMTNSSWTNNHIKQIWQSNTCSI-VYPPC-STEDLKSKFGT---- 264 (465)
T ss_pred c--c-----hhhhHHHHHHHHHHHHHHhccccceEEEecchhhHHHHHHHhhccceeE-EcCCC-CHHHHHHHhcc----
Confidence 1 1 1111122355656421 111100000001122222233344444 45543 33343322111
Q ss_pred HHHHHHHHHcCCCeEEEeccCccccCCHHHHHHHHHHHHHhCCC--CcCceEEEEEecCCCCCchhHHHHHHHHHHHHHH
Q 003025 324 WRVQELKQQFEGKTVLLGVDDMDIFKGVDLKLLAMEHLLKQHPK--WQGRAVLVQIANPARGRGKDLEEIQAEIHATCKR 401 (856)
Q Consensus 324 ~~~~~l~~~~~~k~iil~VdRld~~KGi~~~l~A~~~ll~~~p~--~~~~vvLvqi~~p~r~~~~~~~~l~~~~~~lv~~ 401 (856)
.-+....+|+++.+.|.|+.. .|+-+...+.++|. ...++.|+++|+ .|+ ++.++.-+.++.++.+
T Consensus 265 --------e~~r~~~ll~l~Q~RPEKnH~-~Lql~Al~~~~~pl~a~~~~iKL~ivGS-cRn--eeD~ervk~Lkd~a~~ 332 (465)
T KOG1387|consen 265 --------EGERENQLLSLAQFRPEKNHK-ILQLFALYLKNEPLEASVSPIKLIIVGS-CRN--EEDEERVKSLKDLAEE 332 (465)
T ss_pred --------cCCcceEEEEEeecCcccccH-HHHHHHHHHhcCchhhccCCceEEEEec-cCC--hhhHHHHHHHHHHHHh
Confidence 012346899999999999999 77777778888887 334677877764 343 3334555667777776
Q ss_pred HhcccCCCCcccEEEEcCCCCHHHHHHHHHhcceeeeccccccCCCcccceeeeecCCCCCCCCCCCCCCCCceEEecCC
Q 003025 402 INETFGRPGYEPVVFIDKPVTLSERAAYYTIAECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEF 481 (856)
Q Consensus 402 IN~~~~~~~~~pvv~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~g~lV~Se~ 481 (856)
++-. ..+.|.-.+|.+++..+|..|-+-|-+-..|-||+.+.||||++. .+|+-.-
T Consensus 333 L~i~-------~~v~F~~N~Py~~lv~lL~~a~iGvh~MwNEHFGIsVVEyMAAGl-----------------Ipi~h~S 388 (465)
T KOG1387|consen 333 LKIP-------KHVQFEKNVPYEKLVELLGKATIGVHTMWNEHFGISVVEYMAAGL-----------------IPIVHNS 388 (465)
T ss_pred cCCc-------cceEEEecCCHHHHHHHhccceeehhhhhhhhcchhHHHHHhcCc-----------------eEEEeCC
Confidence 6532 234566689999999999999999999999999999999999853 4444444
Q ss_pred cccc-ccc---C---CceeeCCCCHHHHHHHHHHHHcCCHHHHHHHHHHHhhhhhcCCHHHHHHHHHHHHHH
Q 003025 482 IGCS-PSL---S---GAIRVNPWNIEATAEAMHEAIQMNEAEKQLRHEKHYRYVSTHDVAYWARSFFQDMER 546 (856)
Q Consensus 482 ~G~~-~~l---~---~al~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~l~~ 546 (856)
+|.. +.+ . .|++. -+.++-||+|.++++++.+||....+..|..+.++.-....+.|...+..
T Consensus 389 gGP~lDIV~~~~G~~tGFla--~t~~EYaE~iLkIv~~~~~~r~~~r~~AR~s~~RFsE~~F~kd~~~~i~k 458 (465)
T KOG1387|consen 389 GGPLLDIVTPWDGETTGFLA--PTDEEYAEAILKIVKLNYDERNMMRRNARKSLARFGELKFDKDWENPICK 458 (465)
T ss_pred CCCceeeeeccCCccceeec--CChHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHhhHHHHHHhHhHHHHH
Confidence 4432 222 1 25665 36788999999999999999887777778878777766666666654444
|
|
| >TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit | Back alignment and domain information |
|---|
Probab=98.79 E-value=1.2e-08 Score=101.73 Aligned_cols=140 Identities=19% Similarity=0.233 Sum_probs=100.2
Q ss_pred CcEEEEEecCCCCCCCC---CC----CCCCCHHHHHHHHHHHhhCCCeEEEecCCChhhHHHhhcCCCCccEEeeCCEEE
Q 003025 590 KSRAILFDYDGTVMPQT---SI----NKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSPCKKLGIAAEHGYFM 662 (856)
Q Consensus 590 ~~rlI~~DlDGTLl~~~---~~----~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~~~~lgliaenG~~I 662 (856)
.+|+++||+||||++-. .. .+..+.+--.+++.| ++.|+.++|+|+++...+...+.. +++.
T Consensus 6 ~i~~~v~d~dGv~tdg~~~~~~~g~~~~~~~~~D~~~~~~L-~~~Gi~laIiT~k~~~~~~~~l~~---lgi~------- 74 (169)
T TIGR02726 6 NIKLVILDVDGVMTDGRIVINDEGIESRNFDIKDGMGVIVL-QLCGIDVAIITSKKSGAVRHRAEE---LKIK------- 74 (169)
T ss_pred cCeEEEEeCceeeECCeEEEcCCCcEEEEEecchHHHHHHH-HHCCCEEEEEECCCcHHHHHHHHH---CCCc-------
Confidence 38999999999999821 01 123456667788887 778999999999998888887733 2210
Q ss_pred EeCCCcceEecCCCCcccHHHHHHHHHHHHhhcCCcceEEecccceEEeeecCCCCCCchhHHHHHHHHHHHhcCCCeEE
Q 003025 663 RWSADEEWQNCGQSVDFGWIQIAEPVMKLYTESTDGSYIEIKESALVWHHRDADPGFGSSQAKELLDHLESVLANEPAAV 742 (856)
Q Consensus 663 ~~~~~~~w~~~~~~~~~~w~~~v~~i~~~~~~~~~Gs~ie~k~~~l~~~~~~~dp~~~~~~a~el~~~L~~~l~~~~~~v 742 (856)
.|.. +
T Consensus 75 ------~~f~-------------------------~-------------------------------------------- 79 (169)
T TIGR02726 75 ------RFHE-------------------------G-------------------------------------------- 79 (169)
T ss_pred ------EEEe-------------------------c--------------------------------------------
Confidence 0000 0
Q ss_pred EEcCeEEEEEeCCCCHHHHHHHHHHHhhhcCCCcceEEEEeCCchhHHHHHHccccccCCCCCCCccEEEEEeCCC----
Q 003025 743 KSGQFIVEVKPQGVSKGVVAEKIFTTMAESGRHADFVLCIGDDRSDEDMFEIIGNATSSGVLSSNASVFACTVGQK---- 818 (856)
Q Consensus 743 ~~g~~~vEI~p~gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~---- 818 (856)
++ .|...++.+++++ +++++++++|||+.||++|++.+|.+ ++++++
T Consensus 80 --------~k----pkp~~~~~~~~~l---~~~~~ev~~iGD~~nDi~~~~~ag~~--------------~am~nA~~~l 130 (169)
T TIGR02726 80 --------IK----KKTEPYAQMLEEM---NISDAEVCYVGDDLVDLSMMKRVGLA--------------VAVGDAVADV 130 (169)
T ss_pred --------CC----CCHHHHHHHHHHc---CcCHHHEEEECCCHHHHHHHHHCCCe--------------EECcCchHHH
Confidence 01 2667888999998 99999999999999999999999964 555553
Q ss_pred ccccceEcCC--h-hHHHHHHHHHHHhcC
Q 003025 819 PSKAKYYLDD--A-AEVVTMLEALAEASA 844 (856)
Q Consensus 819 ~s~A~y~l~~--~-~eV~~~L~~L~~~~~ 844 (856)
+..|+|++.. . ..+.++++.+.+...
T Consensus 131 k~~A~~I~~~~~~~g~v~e~~e~il~~~~ 159 (169)
T TIGR02726 131 KEAAAYVTTARGGHGAVREVAELILKAQG 159 (169)
T ss_pred HHhCCEEcCCCCCCCHHHHHHHHHHHhcC
Confidence 5788998742 2 346777777776543
|
Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases. |
| >cd01427 HAD_like Haloacid dehalogenase-like hydrolases | Back alignment and domain information |
|---|
Probab=98.76 E-value=2.8e-08 Score=94.06 Aligned_cols=55 Identities=18% Similarity=0.284 Sum_probs=45.6
Q ss_pred EEEEecCCCCCCCCC-----CCCCCCHHHHHHHHHHHhhCCCeEEEecCCChhhHHHhhcC
Q 003025 593 AILFDYDGTVMPQTS-----INKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSP 648 (856)
Q Consensus 593 lI~~DlDGTLl~~~~-----~~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~ 648 (856)
+++||+||||++..+ ....+.+.+.+.|++| ++.|+.++|+||+....+..+++.
T Consensus 1 ~~vfD~D~tl~~~~~~~~~~~~~~~~~~~~~~l~~l-~~~g~~i~ivS~~~~~~~~~~~~~ 60 (139)
T cd01427 1 AVLFDLDGTLLDSEPGIAEIEELELYPGVKEALKEL-KEKGIKLALATNKSRREVLELLEE 60 (139)
T ss_pred CeEEccCCceEccCccccccccCCcCcCHHHHHHHH-HHCCCeEEEEeCchHHHHHHHHHH
Confidence 489999999998332 1137889999999997 667999999999999999998854
|
The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases. |
| >TIGR03713 acc_sec_asp1 accessory Sec system protein Asp1 | Back alignment and domain information |
|---|
Probab=98.74 E-value=5.7e-07 Score=105.37 Aligned_cols=272 Identities=12% Similarity=0.115 Sum_probs=169.4
Q ss_pred HHHHHHHHHHHHHHH----cCCCCCEEE--EeCcccchHHHHHHhhcCCCeEEEEEccCCCChHHHhcCCc--hHHHHHH
Q 003025 182 YVSANKIFSQRVIEV----INPEDDYVW--IHDYHLMVLPTFLRRRFTRLRMGFFLHSPFPSSEIYRTLPV--REEILKA 253 (856)
Q Consensus 182 Y~~vN~~fa~~i~~~----~~~~~D~Vw--ihDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~~~~lp~--r~eil~~ 253 (856)
|...+..++..+-+. ..+ +|++. ++.-|... +....|..++.+..|+ =+. |. -+..+..
T Consensus 203 f~~~~eLi~efl~~l~~~~~~~-~d~~Iva~Dr~~~~~----~~~~~~~~~~~ls~f~-~~~-------~~~~y~~~l~~ 269 (519)
T TIGR03713 203 YSNMDELIREKFQRYLKVEVKD-DDEIIVASDDRHNFL----VADTFPAKNLIFSLFS-ERN-------RHHTYLDLYES 269 (519)
T ss_pred ECCHHHHHHHHHHHHHHhhCCC-CCEEEEEcCchhhhh----HhhcCccceEEEEecc-Ccc-------cccchhhhhhC
Confidence 444444444443333 333 58777 67777766 4444444445556665 111 22 2455666
Q ss_pred hHhCCEEcccCHHHHHHHHHHHHhhhCceecccCceeeEEECCEEEEEEEeecccCchHHHHHhcCchHHHHHHHHHHHc
Q 003025 254 LLNADLIGFHTFDYARHFLSCCSRMLGLEYQSKRGYIGLEYYGRTVGIKIMPVGIHMGQIESVLRLADKDWRVQELKQQF 333 (856)
Q Consensus 254 ll~~dligf~t~~~~~~Fl~~~~r~lg~~~~~~~~~~~~~~~gr~~~i~i~p~GId~~~~~~~~~~~~~~~~~~~l~~~~ 333 (856)
+-.+|.+-.-|.+-.+........ .. ....|..+|++.=...+ ...++.
T Consensus 270 ~~~~d~iIv~T~~q~~~l~~~~~~----------------~~-~~~~v~~Ip~~~~~~~~--------------~~s~r~ 318 (519)
T TIGR03713 270 LSRADLIIVDREDIERLLEENYRE----------------NY-VEFDISRITPFDTRLRL--------------GQSQQL 318 (519)
T ss_pred hhhcCeEEEcCHHHHHHHHHHhhh----------------cc-cCCcceeeCccceEEec--------------Chhhcc
Confidence 667776665564433322211100 00 11233335555331110 112333
Q ss_pred CCCeEEEeccCccccCCHHHHHHHHHHHHHhCCCCcCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCC-c-
Q 003025 334 EGKTVLLGVDDMDIFKGVDLKLLAMEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPG-Y- 411 (856)
Q Consensus 334 ~~k~iil~VdRld~~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~~~~lv~~IN~~~~~~~-~- 411 (856)
.++.|.+++||| +.|-+...|+|+.++++++|+.. |...|... + .++.+.++++++++|..++... +
T Consensus 319 ~~~~I~v~idrL-~ek~~~~~I~av~~~~~~~p~~~----L~~~gy~~-----~-~~~~~~l~~~i~~~~~~~~~~~~~~ 387 (519)
T TIGR03713 319 YETEIGFWIDGL-SDEELQQILQQLLQYILKNPDYE----LKILTYNN-----D-NDITQLLEDILEQINEEYNQDKNFF 387 (519)
T ss_pred cceEEEEEcCCC-ChHHHHHHHHHHHHHHhhCCCeE----EEEEEecC-----c-hhHHHHHHHHHHHHHhhhchhhhcc
Confidence 567788888899 99999999999999999999865 66665321 1 2345677777777776643211 0
Q ss_pred --------------------ccEEEEcCCCCHHHHHHHHHhcceeeeccccccCCCcccceeeeecCCCCCCCCCCCCCC
Q 003025 412 --------------------EPVVFIDKPVTLSERAAYYTIAECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAP 471 (856)
Q Consensus 412 --------------------~pvv~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~ 471 (856)
...+.|.+..+..++...|.-|.++|.+|..|||+ +.+||++.|.
T Consensus 388 ~~~~~~~~~~~~~~~~~~~~~~~v~f~gy~~e~dl~~~~~~arl~id~s~~eg~~-~~ieAiS~Gi-------------- 452 (519)
T TIGR03713 388 SLSEQDENQPILQTDEEQKEKERIAFTTLTNEEDLISALDKLRLIIDLSKEPDLY-TQISGISAGI-------------- 452 (519)
T ss_pred ccchhhhhhhcccchhhcccccEEEEEecCCHHHHHHHHhhheEEEECCCCCChH-HHHHHHHcCC--------------
Confidence 03667787777779999999999999999999999 9999999843
Q ss_pred CCceEEecCCcccccccC---CceeeCCCCHHHHHHHHHHHHcCCHHHHHHHHHHHhhhhhcCC
Q 003025 472 KKSMLVVSEFIGCSPSLS---GAIRVNPWNIEATAEAMHEAIQMNEAEKQLRHEKHYRYVSTHD 532 (856)
Q Consensus 472 ~~g~lV~Se~~G~~~~l~---~al~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~ 532 (856)
|.| .-|.++.+. +|.+| .|++++++||...|..+. .........++...+++
T Consensus 453 ---PqI---nyg~~~~V~d~~NG~li--~d~~~l~~al~~~L~~~~-~wn~~~~~sy~~~~~yS 507 (519)
T TIGR03713 453 ---PQI---NKVETDYVEHNKNGYII--DDISELLKALDYYLDNLK-NWNYSLAYSIKLIDDYS 507 (519)
T ss_pred ---Cee---ecCCceeeEcCCCcEEe--CCHHHHHHHHHHHHhCHH-HHHHHHHHHHHHHHHhh
Confidence 666 666777773 59999 799999999999998543 22333333344444433
|
This protein is designated Asp1 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown. |
| >PRK09814 beta-1,6-galactofuranosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=98.74 E-value=3.1e-07 Score=102.31 Aligned_cols=240 Identities=13% Similarity=0.028 Sum_probs=136.0
Q ss_pred HHHHcCCCCCEEEEeCcccch--HHH-HHHh-hcCCCeEEEEEccCCCChHHHhcCCchHHHHHHhHhCCEEcccCHHHH
Q 003025 193 VIEVINPEDDYVWIHDYHLMV--LPT-FLRR-RFTRLRMGFFLHSPFPSSEIYRTLPVREEILKALLNADLIGFHTFDYA 268 (856)
Q Consensus 193 i~~~~~~~~D~VwihDyhl~l--lp~-~lr~-~~~~~~i~~flH~PfP~~e~~~~lp~r~eil~~ll~~dligf~t~~~~ 268 (856)
++..++++ |+|.+|..-+.. ++. ++++ +..++|+.+++|-=||..-... -.........+-.||.|..++....
T Consensus 58 ~~~~~~~~-Dvv~~~~P~~~~~~~~~~~~~~~k~~~~k~i~~ihD~~~~~~~~~-~~~~~~~~~~~~~aD~iI~~S~~~~ 135 (333)
T PRK09814 58 ILASLKPG-DIVIFQFPTWNGFEFDRLFVDKLKKKQVKIIILIHDIEPLRFDSN-YYLMKEEIDMLNLADVLIVHSKKMK 135 (333)
T ss_pred HHhcCCCC-CEEEEECCCCchHHHHHHHHHHHHHcCCEEEEEECCcHHHhcccc-chhhHHHHHHHHhCCEEEECCHHHH
Confidence 45557774 999998643321 223 2222 1126999999998776421100 0012223444556899998887655
Q ss_pred HHHHHHHHhhhCceecccCceeeEEECCEEEEEEEeecccCchHHHHHhcCchHHHHHHHHHHHcCCCeEEEeccCcccc
Q 003025 269 RHFLSCCSRMLGLEYQSKRGYIGLEYYGRTVGIKIMPVGIHMGQIESVLRLADKDWRVQELKQQFEGKTVLLGVDDMDIF 348 (856)
Q Consensus 269 ~~Fl~~~~r~lg~~~~~~~~~~~~~~~gr~~~i~i~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~k~iil~VdRld~~ 348 (856)
+.+.+ .|+. ..++.+.|+..+..... .+....+++.|+++||+...
T Consensus 136 ~~l~~-----~g~~---------------~~~i~~~~~~~~~~~~~--------------~~~~~~~~~~i~yaG~l~k~ 181 (333)
T PRK09814 136 DRLVE-----EGLT---------------TDKIIVQGIFDYLNDIE--------------LVKTPSFQKKINFAGNLEKS 181 (333)
T ss_pred HHHHH-----cCCC---------------cCceEeccccccccccc--------------ccccccCCceEEEecChhhc
Confidence 55443 1221 01122233322221000 00112345689999999943
Q ss_pred CCHHHHHHHHHHHHHhCCCCcCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCcccEEEEcCCCCHHHHHH
Q 003025 349 KGVDLKLLAMEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDKPVTLSERAA 428 (856)
Q Consensus 349 KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~~~~lv~~IN~~~~~~~~~pvv~~~~~v~~~el~a 428 (856)
.++ .+..|+ +.|+.+|.. ++.. . ..+.+.+.|.++.+|+.+
T Consensus 182 ~~l----------~~~~~~----~~l~i~G~g-----~~~~-------~-------------~~~~V~f~G~~~~eel~~ 222 (333)
T PRK09814 182 PFL----------KNWSQG----IKLTVFGPN-----PEDL-------E-------------NSANISYKGWFDPEELPN 222 (333)
T ss_pred hHH----------HhcCCC----CeEEEECCC-----cccc-------c-------------cCCCeEEecCCCHHHHHH
Confidence 321 112444 447777642 2211 0 112355678999999999
Q ss_pred HHHhcceeeecccc-----------ccCCCcccceeeeecCCCCCCCCCCCCCCCCceEEecCCcccccccC---Cceee
Q 003025 429 YYTIAECVVVTAVR-----------DGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIGCSPSLS---GAIRV 494 (856)
Q Consensus 429 ly~~ADv~vvtS~~-----------EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~al~V 494 (856)
+|+. |+.+++.-. -.++--..|||||+. |+|++..++.++.+. .|+.|
T Consensus 223 ~l~~-~~gLv~~~~~~~~~~~~y~~~~~P~K~~~ymA~G~-----------------PVI~~~~~~~~~~V~~~~~G~~v 284 (333)
T PRK09814 223 ELSK-GFGLVWDGDTNDGEYGEYYKYNNPHKLSLYLAAGL-----------------PVIVWSKAAIADFIVENGLGFVV 284 (333)
T ss_pred HHhc-CcCeEEcCCCCCccchhhhhccchHHHHHHHHCCC-----------------CEEECCCccHHHHHHhCCceEEe
Confidence 9988 666554321 123334778899955 999999999888883 38888
Q ss_pred CCCCHHHHHHHHHHHHcCCHHHHHHHHHHHhhhhhc
Q 003025 495 NPWNIEATAEAMHEAIQMNEAEKQLRHEKHYRYVST 530 (856)
Q Consensus 495 nP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~ 530 (856)
+ +.++++++|... +++++.++.++.++....
T Consensus 285 ~--~~~el~~~l~~~---~~~~~~~m~~n~~~~~~~ 315 (333)
T PRK09814 285 D--SLEELPEIIDNI---TEEEYQEMVENVKKISKL 315 (333)
T ss_pred C--CHHHHHHHHHhc---CHHHHHHHHHHHHHHHHH
Confidence 7 688999998873 455555555555544433
|
|
| >PRK11133 serB phosphoserine phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.73 E-value=2.7e-07 Score=101.63 Aligned_cols=66 Identities=18% Similarity=0.188 Sum_probs=54.4
Q ss_pred CCHHHHHHHHHHHhhhcCCCcceEEEEeCCchhHHHHHHccccccCCCCCCCccEEEEEeCCC---ccccceEcC--Chh
Q 003025 756 VSKGVVAEKIFTTMAESGRHADFVLCIGDDRSDEDMFEIIGNATSSGVLSSNASVFACTVGQK---PSKAKYYLD--DAA 830 (856)
Q Consensus 756 vsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~---~s~A~y~l~--~~~ 830 (856)
..|+.+++.+++++ |++++++++|||+.||++|++.+|. +|++..+ +..|++.++ +.+
T Consensus 247 k~K~~~L~~la~~l---gi~~~qtIaVGDg~NDl~m~~~AGl--------------giA~nAkp~Vk~~Ad~~i~~~~l~ 309 (322)
T PRK11133 247 QYKADTLTRLAQEY---EIPLAQTVAIGDGANDLPMIKAAGL--------------GIAYHAKPKVNEQAQVTIRHADLM 309 (322)
T ss_pred ccHHHHHHHHHHHc---CCChhhEEEEECCHHHHHHHHHCCC--------------eEEeCCCHHHHhhCCEEecCcCHH
Confidence 46999999999999 9999999999999999999999996 4555323 478999886 567
Q ss_pred HHHHHHHH
Q 003025 831 EVVTMLEA 838 (856)
Q Consensus 831 eV~~~L~~ 838 (856)
+|+.+|-.
T Consensus 310 ~~l~~~~~ 317 (322)
T PRK11133 310 GVLCILSG 317 (322)
T ss_pred HHHHHhcc
Confidence 77776643
|
|
| >COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.66 E-value=4.9e-08 Score=92.85 Aligned_cols=73 Identities=19% Similarity=0.281 Sum_probs=55.1
Q ss_pred CHHHHHHHHHHHhhhcCCCcceEEEEeCCchhHHHHHHccccccCCCCCCCccEEEEEeCCC--ccccceEcC---ChhH
Q 003025 757 SKGVVAEKIFTTMAESGRHADFVLCIGDDRSDEDMFEIIGNATSSGVLSSNASVFACTVGQK--PSKAKYYLD---DAAE 831 (856)
Q Consensus 757 sKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~--~s~A~y~l~---~~~e 831 (856)
+|-.+.+.|++++ ++.++++.++||+.||+++|+.+|.+ |+++-+.. .+.|.|++. ....
T Consensus 83 dK~~a~~~L~~~~---~l~~e~~ayiGDD~~Dlpvm~~vGls------------~a~~dAh~~v~~~a~~Vt~~~GG~GA 147 (170)
T COG1778 83 DKLAAFEELLKKL---NLDPEEVAYVGDDLVDLPVMEKVGLS------------VAVADAHPLLKQRADYVTSKKGGEGA 147 (170)
T ss_pred hHHHHHHHHHHHh---CCCHHHhhhhcCccccHHHHHHcCCc------------ccccccCHHHHHhhHhhhhccCcchH
Confidence 3778888999999 99999999999999999999999964 44444432 578999884 3455
Q ss_pred HHHHHHHHHHhcC
Q 003025 832 VVTMLEALAEASA 844 (856)
Q Consensus 832 V~~~L~~L~~~~~ 844 (856)
|.++.+-+...+.
T Consensus 148 vREv~dlil~aq~ 160 (170)
T COG1778 148 VREVCDLILQAQG 160 (170)
T ss_pred HHHHHHHHHHccC
Confidence 6666666555443
|
|
| >COG0546 Gph Predicted phosphatases [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.56 E-value=2.1e-07 Score=97.44 Aligned_cols=85 Identities=21% Similarity=0.252 Sum_probs=65.5
Q ss_pred hcCCCeEEEEcCeEEEEEeCCCCHHHHHHHHHHHhhhcCCCcceEEEEeCCchhHHHHHHccccccCCCCCCCccEEEEE
Q 003025 735 LANEPAAVKSGQFIVEVKPQGVSKGVVAEKIFTTMAESGRHADFVLCIGDDRSDEDMFEIIGNATSSGVLSSNASVFACT 814 (856)
Q Consensus 735 l~~~~~~v~~g~~~vEI~p~gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~ 814 (856)
+..+...+..+.....-+| +...+..+++.+ |.+++++++|||+.+|+.|-+.+|.. +++|+
T Consensus 128 l~~~F~~i~g~~~~~~~KP----~P~~l~~~~~~~---~~~~~~~l~VGDs~~Di~aA~~Ag~~-----------~v~v~ 189 (220)
T COG0546 128 LADYFDVIVGGDDVPPPKP----DPEPLLLLLEKL---GLDPEEALMVGDSLNDILAAKAAGVP-----------AVGVT 189 (220)
T ss_pred CccccceEEcCCCCCCCCc----CHHHHHHHHHHh---CCChhheEEECCCHHHHHHHHHcCCC-----------EEEEE
Confidence 3344444444455555566 678888889988 88888999999999999999999952 47899
Q ss_pred eCCC------ccccceEcCChhHHHHHHH
Q 003025 815 VGQK------PSKAKYYLDDAAEVVTMLE 837 (856)
Q Consensus 815 vG~~------~s~A~y~l~~~~eV~~~L~ 837 (856)
+|.. ...|++++++..++...|.
T Consensus 190 ~g~~~~~~l~~~~~d~vi~~~~el~~~l~ 218 (220)
T COG0546 190 WGYNSREELAQAGADVVIDSLAELLALLA 218 (220)
T ss_pred CCCCCCcchhhcCCCEEECCHHHHHHHHh
Confidence 9852 3668999999999888775
|
|
| >PRK13226 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.47 E-value=1.6e-07 Score=98.87 Aligned_cols=66 Identities=14% Similarity=0.077 Sum_probs=55.3
Q ss_pred HHHHHHHHHHHhhhcCCCcceEEEEeCCchhHHHHHHccccccCCCCCCCccEEEEEeCCC--c-----cccceEcCChh
Q 003025 758 KGVVAEKIFTTMAESGRHADFVLCIGDDRSDEDMFEIIGNATSSGVLSSNASVFACTVGQK--P-----SKAKYYLDDAA 830 (856)
Q Consensus 758 KG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~--~-----s~A~y~l~~~~ 830 (856)
+...+..+++++ |++++++++|||+.+|+.+.+.+|.. +++|+.|.. + ..|.|.++++.
T Consensus 153 ~p~~~~~~~~~l---~~~p~~~l~IGDs~~Di~aA~~aG~~-----------~i~v~~g~~~~~~~~~~~~~~~~i~~~~ 218 (229)
T PRK13226 153 HPLPLLVAAERI---GVAPTDCVYVGDDERDILAARAAGMP-----------SVAALWGYRLHDDDPLAWQADVLVEQPQ 218 (229)
T ss_pred CHHHHHHHHHHh---CCChhhEEEeCCCHHHHHHHHHCCCc-----------EEEEeecCCCCCcChhhcCCCeeeCCHH
Confidence 667789999999 99999999999999999999999973 467777752 1 24889999999
Q ss_pred HHHHHHH
Q 003025 831 EVVTMLE 837 (856)
Q Consensus 831 eV~~~L~ 837 (856)
++.+.|.
T Consensus 219 el~~~~~ 225 (229)
T PRK13226 219 LLWNPAT 225 (229)
T ss_pred HHHHHhc
Confidence 9888765
|
|
| >TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458 | Back alignment and domain information |
|---|
Probab=98.44 E-value=4.3e-06 Score=89.61 Aligned_cols=59 Identities=15% Similarity=0.267 Sum_probs=45.7
Q ss_pred cEEEEEecCCCCCCCCCCCC---CCCHHHHHHHHHHHhhCCCeEEEecCCChhhHHHhhcCCCCcc
Q 003025 591 SRAILFDYDGTVMPQTSINK---APSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSPCKKLG 653 (856)
Q Consensus 591 ~rlI~~DlDGTLl~~~~~~~---~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~~~~lg 653 (856)
.|+|+||+||||++ .+. .+.+.+.++|++| ++.|..++++|||+..........+..+|
T Consensus 1 ~k~i~~D~DGtl~~---~~~~~~~~~~~a~~al~~l-~~~G~~~~~~Tn~~~~~~~~~~~~l~~~g 62 (257)
T TIGR01458 1 VKGVLLDISGVLYI---SDAKSGVAVPGSQEAVKRL-RGASVKVRFVTNTTKESKQDLLERLQRLG 62 (257)
T ss_pred CCEEEEeCCCeEEe---CCCcccCcCCCHHHHHHHH-HHCCCeEEEEECCCCCCHHHHHHHHHHcC
Confidence 47999999999998 444 3788999999997 88899999999988876444443333333
|
This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published. |
| >PRK10444 UMP phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.44 E-value=4.9e-06 Score=88.62 Aligned_cols=59 Identities=12% Similarity=0.193 Sum_probs=49.7
Q ss_pred cEEEEEecCCCCCCCCCCCCCCCHHHHHHHHHHHhhCCCeEEEecCCChhhHHHhhcCCCCccE
Q 003025 591 SRAILFDYDGTVMPQTSINKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSPCKKLGI 654 (856)
Q Consensus 591 ~rlI~~DlDGTLl~~~~~~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~~~~lgl 654 (856)
+|+|+||+||||+. .+ ++.+.+.++|++| ++.|.+++++|+|+......+...+..+|+
T Consensus 1 ~~~v~~DlDGtL~~---~~-~~~p~a~~~l~~L-~~~g~~~~~~Tn~~~~~~~~~~~~l~~~G~ 59 (248)
T PRK10444 1 IKNVICDIDGVLMH---DN-VAVPGAAEFLHRI-LDKGLPLVLLTNYPSQTGQDLANRFATAGV 59 (248)
T ss_pred CcEEEEeCCCceEe---CC-eeCccHHHHHHHH-HHCCCeEEEEeCCCCCCHHHHHHHHHHcCC
Confidence 57999999999998 44 7889999999998 788999999999999887777765555554
|
|
| >cd04299 GT1_Glycogen_Phosphorylase_like This family is most closely related to the oligosaccharide phosphorylase domain family and other unidentified sequences | Back alignment and domain information |
|---|
Probab=98.44 E-value=2.3e-05 Score=95.02 Aligned_cols=182 Identities=12% Similarity=0.097 Sum_probs=115.8
Q ss_pred eEEEeccCccccCCHHHHHHHHHHHHH--hCCCCcCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCcccE
Q 003025 337 TVLLGVDDMDIFKGVDLKLLAMEHLLK--QHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPV 414 (856)
Q Consensus 337 ~iil~VdRld~~KGi~~~l~A~~~ll~--~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~~~~lv~~IN~~~~~~~~~pv 414 (856)
.+|.++.|+...|+..+++..++++++ .+|+ ..+.+|..|...-.+... +++.+++.+++++ -+|. + .|
T Consensus 479 ltigfarRfa~YKR~~Lil~dl~rl~~il~~~~--~pvQ~IfaGKAhP~d~~g-K~iIk~i~~~a~~--p~~~--~--kV 549 (778)
T cd04299 479 LTIGFARRFATYKRATLLLRDPERLKRLLNDPE--RPVQFIFAGKAHPADEPG-KELIQEIVEFSRR--PEFR--G--RI 549 (778)
T ss_pred cEEeeeecchhhhhHHHHHHHHHHHHHHhhCCC--CCeEEEEEEecCccchHH-HHHHHHHHHHHhC--cCCC--C--cE
Confidence 378999999999999999999999865 3444 247777777543222111 3344455554431 0221 1 35
Q ss_pred EEEcCCCCHHHHHHHHHhcceeeeccc--cccCCCcccceeeeecCCCCCCCCCCCCCCCCceEEecCCccccccc---C
Q 003025 415 VFIDKPVTLSERAAYYTIAECVVVTAV--RDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIGCSPSL---S 489 (856)
Q Consensus 415 v~~~~~v~~~el~aly~~ADv~vvtS~--~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l---~ 489 (856)
+++. ..+..--..++..|||++.||. .|.=|+.-+-|+. .|.|-+|-.-|.-.+- .
T Consensus 550 vfle-~Yd~~lA~~LvaG~DvwLn~prrp~EAsGTSgMKA~~------------------NG~LnlSvlDGww~E~~~g~ 610 (778)
T cd04299 550 VFLE-DYDMALARHLVQGVDVWLNTPRRPLEASGTSGMKAAL------------------NGGLNLSVLDGWWDEGYDGE 610 (778)
T ss_pred EEEc-CCCHHHHHHHHhhhhhcccCCCCCCCCCccchHHHHH------------------cCCeeeecccCccccccCCC
Confidence 5555 4455555578999999999999 7887777777666 3678888887765555 2
Q ss_pred CceeeCC------------CCHHHHHHHHHHHHc----------CCHHHHHHHHHHHhhhhhcCCHHHHHHHHHHHHHH
Q 003025 490 GAIRVNP------------WNIEATAEAMHEAIQ----------MNEAEKQLRHEKHYRYVSTHDVAYWARSFFQDMER 546 (856)
Q Consensus 490 ~al~VnP------------~d~~~~A~ai~~aL~----------m~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~l~~ 546 (856)
+|+.+.+ .|.+++-+.|.+.+- .|..-.+.+.+.+......+++.+-++.++..+..
T Consensus 611 nGwaig~~~~~~~~~~~d~~da~~Ly~~Le~~i~p~yy~r~~~g~p~~W~~~~k~sm~~~~p~fs~~Rmv~eY~~~~Y~ 689 (778)
T cd04299 611 NGWAIGDGDEYEDDEYQDAEEAEALYDLLENEVIPLFYDRDEGGYPPGWVAMMKHSMATLGPRFSAERMVREYVERFYL 689 (778)
T ss_pred CceEeCCCccccChhhcchhhHHHHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHhcccCCCHHHHHHHHHHHhHH
Confidence 4888877 455555566654432 12222222223344444568888888888887764
|
Oligosaccharide phosphorylase catalyzes the breakdown of oligosaccharides into glucose-1-phosphate units. They are important allosteric enzymes in carbohydrate metabolism. The members of this family are found in bacteria and Archaea. |
| >PRK13288 pyrophosphatase PpaX; Provisional | Back alignment and domain information |
|---|
Probab=98.41 E-value=9.9e-07 Score=91.72 Aligned_cols=69 Identities=16% Similarity=0.227 Sum_probs=57.1
Q ss_pred CHHHHHHHHHHHhhhcCCCcceEEEEeCCchhHHHHHHccccccCCCCCCCccEEEEEeCCC------ccccceEcCChh
Q 003025 757 SKGVVAEKIFTTMAESGRHADFVLCIGDDRSDEDMFEIIGNATSSGVLSSNASVFACTVGQK------PSKAKYYLDDAA 830 (856)
Q Consensus 757 sKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~------~s~A~y~l~~~~ 830 (856)
-|...++++++++ +.+++++++|||+.+|+.+.+.+|.. +++|+.|.. ...|+|++++..
T Consensus 139 p~p~~~~~~~~~~---~~~~~~~~~iGDs~~Di~aa~~aG~~-----------~i~v~~g~~~~~~l~~~~~~~~i~~~~ 204 (214)
T PRK13288 139 PDPEPVLKALELL---GAKPEEALMVGDNHHDILAGKNAGTK-----------TAGVAWTIKGREYLEQYKPDFMLDKMS 204 (214)
T ss_pred CCcHHHHHHHHHc---CCCHHHEEEECCCHHHHHHHHHCCCe-----------EEEEcCCCCCHHHHhhcCcCEEECCHH
Confidence 3788999999999 99999999999999999999999973 467777743 235889999999
Q ss_pred HHHHHHHHH
Q 003025 831 EVVTMLEAL 839 (856)
Q Consensus 831 eV~~~L~~L 839 (856)
++.+++..+
T Consensus 205 ~l~~~i~~~ 213 (214)
T PRK13288 205 DLLAIVGDM 213 (214)
T ss_pred HHHHHHhhc
Confidence 988877543
|
|
| >PF05693 Glycogen_syn: Glycogen synthase; InterPro: IPR008631 This family consists of the eukaryotic glycogen synthase proteins GYS1, GYS2 and GYS3 | Back alignment and domain information |
|---|
Probab=98.41 E-value=1.8e-05 Score=91.27 Aligned_cols=353 Identities=16% Similarity=0.235 Sum_probs=160.5
Q ss_pred cccccccccccCCCCCCCCCCcChHhHHH--HHHHHHHHHHHHHHHcCCCC-CEEEEeCcccchHHHHHHhhcCCCeEEE
Q 003025 153 KQHLWPLFHYMLPFSATHGGRFDRSLWEA--YVSANKIFSQRVIEVINPED-DYVWIHDYHLMVLPTFLRRRFTRLRMGF 229 (856)
Q Consensus 153 ~~~lWpl~H~~~~~~~~~~~~~~~~~w~~--Y~~vN~~fa~~i~~~~~~~~-D~VwihDyhl~llp~~lr~~~~~~~i~~ 229 (856)
+.-||-.|+--.+ ..+.+..++ +--+-..|.+.+.+...... =+.+.|.+..-+-..++|++.|++.-.|
T Consensus 100 k~~lW~~~gIdS~-------~~~~dynea~~Fgyava~fi~~f~~~~~~~~~ViaHfHEWmaG~gll~lr~~~~~VaTvF 172 (633)
T PF05693_consen 100 KGELWELFGIDSP-------HGDGDYNEAVMFGYAVAWFIEEFYKFYEEKPKVIAHFHEWMAGVGLLYLRKRKPDVATVF 172 (633)
T ss_dssp HHHHHHHH------------TT-HHHHHHHHHHHHHHHHHHHHHHH-S-SEEEEEEEESGGGTTHHHHHHHTT-SCEEEE
T ss_pred HHHHHHHcCCCCC-------CCCcchhHHHHHHHHHHHHHHHHHHhhcCCCcEEEEechHhHhHHHHHHhccCCCeeEEE
Confidence 3558888875432 122222221 22223444454554443211 2456777776666678999999999999
Q ss_pred EEccCCC-------ChHHHhcCCc--hHHHHHHhHhCCEEcccCHHHHHHHHHHHHhhhCceecccCcee---eEEECCE
Q 003025 230 FLHSPFP-------SSEIYRTLPV--REEILKALLNADLIGFHTFDYARHFLSCCSRMLGLEYQSKRGYI---GLEYYGR 297 (856)
Q Consensus 230 flH~PfP-------~~e~~~~lp~--r~eil~~ll~~dligf~t~~~~~~Fl~~~~r~lg~~~~~~~~~~---~~~~~gr 297 (856)
+.|.--+ ..++|..|+. .++...- -.-+.+|.++.+.....--..+-...- .-..-+|
T Consensus 173 TTHAT~lGR~l~~~~~~~Y~~L~~~~~d~eA~~----------~~i~~k~~iEraaA~~AdvFTTVSeITa~Ea~~LL~r 242 (633)
T PF05693_consen 173 TTHATLLGRYLAANNKDFYNNLDKFNGDQEAGE----------RNIYHKHSIERAAAHYADVFTTVSEITAKEAEHLLKR 242 (633)
T ss_dssp EESS-HHHHHHTTTSS-TTTSGTTS-HHHHHHH----------TT-HHHHHHHHHHHHHSSEEEESSHHHHHHHHHHHSS
T ss_pred EecccchhhHhhcCCCcHHHHhhccCccccccC----------ccchHHHHHHHHHHHhcCeeeehhhhHHHHHHHHhCC
Confidence 9995432 1223333331 1111100 001244444332111100000000000 0001122
Q ss_pred EEEEEEeecccCchHHHHHhc----CchHHHHHHHH-HHHc-------CCCe-EEEeccCcc-ccCCHHHHHHHHHHHHH
Q 003025 298 TVGIKIMPVGIHMGQIESVLR----LADKDWRVQEL-KQQF-------EGKT-VLLGVDDMD-IFKGVDLKLLAMEHLLK 363 (856)
Q Consensus 298 ~~~i~i~p~GId~~~~~~~~~----~~~~~~~~~~l-~~~~-------~~k~-iil~VdRld-~~KGi~~~l~A~~~ll~ 363 (856)
..-| |.|+|+|...|..... ....++++.++ +..+ .++. ++...||.+ ..||++..|+|+.+|-.
T Consensus 243 ~pDv-V~pNGl~v~~~~~~~efqnl~~~~k~ki~~fv~~~f~g~~dfd~d~tl~~ftsGRYEf~NKG~D~fieAL~rLn~ 321 (633)
T PF05693_consen 243 KPDV-VTPNGLNVDKFPALHEFQNLHAKAKEKIHEFVRGHFYGHYDFDLDKTLYFFTSGRYEFRNKGIDVFIEALARLNH 321 (633)
T ss_dssp --SE-E----B-GGGTSSTTHHHHHHHHHHHHHHHHHHHHSTT---S-GGGEEEEEEESSS-TTTTTHHHHHHHHHHHHH
T ss_pred CCCE-EcCCCccccccccchHHHHHHHHHHHHHHHHHHHHhcccCCCCccceEEEEeeeceeeecCCccHHHHHHHHHHH
Confidence 2222 4699999887643211 01223344443 3333 1344 556689999 57999999999988743
Q ss_pred ---hCCCCcCceEEEEEecCCCCCchh---------HHHHHHHHHHHHHHHhccc------CC-CC--------------
Q 003025 364 ---QHPKWQGRAVLVQIANPARGRGKD---------LEEIQAEIHATCKRINETF------GR-PG-------------- 410 (856)
Q Consensus 364 ---~~p~~~~~vvLvqi~~p~r~~~~~---------~~~l~~~~~~lv~~IN~~~------~~-~~-------------- 410 (856)
.... +.-|+..|..|+....-. +.++++.+.++.++|..+. |. ++
T Consensus 322 ~lk~~~~--~~tVVaFii~pa~~~~~~ve~l~~~a~~~~l~~t~~~i~~~~g~~~~~~~~~~~~p~~~~~~~~~~~~~lk 399 (633)
T PF05693_consen 322 RLKQAGS--DKTVVAFIIVPAKTNSFNVESLKGQAVTKQLRDTVDEIQEKIGKRLFESCLSGRLPDLNELLDKEDIVRLK 399 (633)
T ss_dssp HHHHTT---S-EEEEEEE---SEEEE-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSS-SHHHCS-HHHHHHHH
T ss_pred HHhhcCC--CCeEEEEEEecCccCCcCHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCChHHhcChhhHHHHH
Confidence 2211 223333344455433211 2333333333333332211 11 00
Q ss_pred ------------------------------------------cccEEEEcCCCC------HHHHHHHHHhcceeeecccc
Q 003025 411 ------------------------------------------YEPVVFIDKPVT------LSERAAYYTIAECVVVTAVR 442 (856)
Q Consensus 411 ------------------------------------------~~pvv~~~~~v~------~~el~aly~~ADv~vvtS~~ 442 (856)
-..|+|....++ .-++..+.+.+|++|+||.+
T Consensus 400 r~i~~~~r~~lPPi~TH~l~d~~~DpILn~irr~~L~N~~~drVKVIF~P~yL~~~dgif~l~Y~dfv~GcdLgvFPSYY 479 (633)
T PF05693_consen 400 RCIFALQRNSLPPITTHNLHDDSNDPILNMIRRLGLFNNPEDRVKVIFHPEYLSGTDGIFNLDYYDFVRGCDLGVFPSYY 479 (633)
T ss_dssp HHHHTT--T----SBSEEETTTTT-HHHHHHHHTT----TT-SEEEEE--S---TTSSSS-S-HHHHHHHSSEEEE--SS
T ss_pred HHHHHhccCCCCCeeeeCCCCCccCHHHHHHHhCCCCCCCCCceEEEEeeccccCCCCCCCCCHHHHhccCceeeecccc
Confidence 124555443322 33677889999999999999
Q ss_pred ccCCCcccceeeeecCCCCCCCCCCCCCCCCceEEecCCccccccc--------CCceee-CC--CCH----HHHHHHHH
Q 003025 443 DGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIGCSPSL--------SGAIRV-NP--WNI----EATAEAMH 507 (856)
Q Consensus 443 EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l--------~~al~V-nP--~d~----~~~A~ai~ 507 (856)
|.+|.+|+|++|. +.|-|.|+.+|....+ ..|+.| +- .|. +++|+.|.
T Consensus 480 EPWGYTPlE~~a~-----------------gVPsITTnLsGFG~~~~~~~~~~~~~GV~VvdR~~~n~~e~v~~la~~l~ 542 (633)
T PF05693_consen 480 EPWGYTPLECTAF-----------------GVPSITTNLSGFGCWMQEHIEDPEEYGVYVVDRRDKNYDESVNQLADFLY 542 (633)
T ss_dssp BSS-HHHHHHHHT-----------------T--EEEETTBHHHHHHHTTS-HHGGGTEEEE-SSSS-HHHHHHHHHHHHH
T ss_pred ccccCChHHHhhc-----------------CCceeeccchhHHHHHHHhhccCcCCcEEEEeCCCCCHHHHHHHHHHHHH
Confidence 9999999999998 4499999999976443 125544 32 334 55666666
Q ss_pred HHHcCCHHHHHHHHHHHhhhhhcCCHHHHHHHHHH
Q 003025 508 EAIQMNEAEKQLRHEKHYRYVSTHDVAYWARSFFQ 542 (856)
Q Consensus 508 ~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~~l~ 542 (856)
....|+..+|.....+..+.-..-+|.+-...+.+
T Consensus 543 ~f~~~~~rqri~~Rn~ae~LS~~~dW~~~~~yY~~ 577 (633)
T PF05693_consen 543 KFCQLSRRQRIIQRNRAERLSDLADWKNFGKYYEK 577 (633)
T ss_dssp HHHT--HHHHHHHHHHHHHHGGGGBHHHHCHHHHH
T ss_pred HHHhCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHH
Confidence 67778887776665554444444566555444433
|
Glycogen synthase (GS) is the enzyme responsible for the synthesis of -1,4-linked glucose chains in glycogen. It is the rate limiting enzyme in the synthesis of the polysaccharide, and its activity is highly regulated through phosphorylation at multiple sites and also by allosteric effectors, mainly glucose 6-phosphate (G6P) [].; GO: 0004373 glycogen (starch) synthase activity, 0005978 glycogen biosynthetic process; PDB: 3NB0_C 3RT1_C 3RSZ_D 3O3C_B 3NAZ_B 3NCH_D. |
| >smart00775 LNS2 LNS2 domain | Back alignment and domain information |
|---|
Probab=98.40 E-value=5e-07 Score=89.30 Aligned_cols=52 Identities=13% Similarity=0.264 Sum_probs=45.3
Q ss_pred EEEEecCCCCCCCCCCC-----------CCCCHHHHHHHHHHHhhCCCeEEEecCCChhhHH---HhhcC
Q 003025 593 AILFDYDGTVMPQTSIN-----------KAPSQAVISIINTLCNDARNTVFVVSGRGRDCLG---KWFSP 648 (856)
Q Consensus 593 lI~~DlDGTLl~~~~~~-----------~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~---~~~~~ 648 (856)
++++|+||||++ ++ ..+++.+.++++++ +++|+.|+++|||+..... +|+..
T Consensus 1 iVisDIDGTL~~---sd~~~~~~~~~~~~~~~~~~~~a~~~l-~~~G~~ivy~TGRp~~~~~~t~~~l~~ 66 (157)
T smart00775 1 IVISDIDGTITK---SDVLGHVVPIIGKDWTHPGVAKLYRDI-QNNGYKILYLTARPIGQADRTRSYLSQ 66 (157)
T ss_pred CEEEecCCCCcc---cccccccccccccCcCCHHHHHHHHHH-HHcCCeEEEEcCCcHHHHHHHHHHHHH
Confidence 589999999998 55 67899999999997 8899999999999998874 66644
|
This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance. |
| >PRK13225 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.33 E-value=2.8e-06 Score=91.72 Aligned_cols=70 Identities=19% Similarity=0.320 Sum_probs=59.5
Q ss_pred CHHHHHHHHHHHhhhcCCCcceEEEEeCCchhHHHHHHccccccCCCCCCCccEEEEEeCCC------ccccceEcCChh
Q 003025 757 SKGVVAEKIFTTMAESGRHADFVLCIGDDRSDEDMFEIIGNATSSGVLSSNASVFACTVGQK------PSKAKYYLDDAA 830 (856)
Q Consensus 757 sKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~------~s~A~y~l~~~~ 830 (856)
.|..++..+++++ +++++++++|||+.+|+.+-+.+|.. ++.|..|.. ...|.|++++..
T Consensus 196 ~k~~~~~~~l~~~---~~~p~~~l~IGDs~~Di~aA~~AG~~-----------~I~v~~g~~~~~~l~~~~ad~~i~~~~ 261 (273)
T PRK13225 196 SKRRALSQLVARE---GWQPAAVMYVGDETRDVEAARQVGLI-----------AVAVTWGFNDRQSLVAACPDWLLETPS 261 (273)
T ss_pred CCHHHHHHHHHHh---CcChhHEEEECCCHHHHHHHHHCCCe-----------EEEEecCCCCHHHHHHCCCCEEECCHH
Confidence 4778899999998 99999999999999999999999973 467777743 246899999999
Q ss_pred HHHHHHHHHH
Q 003025 831 EVVTMLEALA 840 (856)
Q Consensus 831 eV~~~L~~L~ 840 (856)
++..++..|.
T Consensus 262 eL~~~~~~~~ 271 (273)
T PRK13225 262 DLLQAVTQLM 271 (273)
T ss_pred HHHHHHHHHh
Confidence 9999888775
|
|
| >COG0560 SerB Phosphoserine phosphatase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.32 E-value=3.4e-06 Score=87.49 Aligned_cols=42 Identities=21% Similarity=0.320 Sum_probs=38.5
Q ss_pred CCCCHHHHHHHHHHHhhhcCCCcceEEEEeCCchhHHHHHHcccc
Q 003025 754 QGVSKGVVAEKIFTTMAESGRHADFVLCIGDDRSDEDMFEIIGNA 798 (856)
Q Consensus 754 ~gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~ 798 (856)
.+-.|..+++.+++.+ |+++++++++|||.||.+||+.+|..
T Consensus 141 ~~~~K~~~l~~~~~~~---g~~~~~~~a~gDs~nDlpml~~ag~~ 182 (212)
T COG0560 141 DGEGKAKALRELAAEL---GIPLEETVAYGDSANDLPMLEAAGLP 182 (212)
T ss_pred CcchHHHHHHHHHHHc---CCCHHHeEEEcCchhhHHHHHhCCCC
Confidence 4557999999999999 99999999999999999999999963
|
|
| >TIGR00215 lpxB lipid-A-disaccharide synthase | Back alignment and domain information |
|---|
Probab=98.31 E-value=4.2e-05 Score=87.03 Aligned_cols=134 Identities=16% Similarity=0.096 Sum_probs=83.6
Q ss_pred CCeEE--EeccCccc-cCCHHHHHHHHHHHHHhCCCCcCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCc
Q 003025 335 GKTVL--LGVDDMDI-FKGVDLKLLAMEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGY 411 (856)
Q Consensus 335 ~k~ii--l~VdRld~-~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~~~~lv~~IN~~~~~~~~ 411 (856)
++++| ++.+|..+ .|++...++|++.+.+++|+++ ++..+.+. ... +.++++....+. +.
T Consensus 190 ~~~~Ilvl~GSR~aei~k~~~~ll~a~~~l~~~~p~~~----~vi~~~~~----~~~----~~~~~~~~~~~~-----~~ 252 (385)
T TIGR00215 190 NGETLALLPGSRGSEVEKLFPLFLKAAQLLEQQEPDLR----RVLPVVNF----KRR----LQFEQIKAEYGP-----DL 252 (385)
T ss_pred CCCEEEEECCCCHHHHHHhHHHHHHHHHHHHHhCCCeE----EEEEeCCc----hhH----HHHHHHHHHhCC-----CC
Confidence 45544 45569887 7999999999999999998765 44333221 111 122222222211 11
Q ss_pred ccEEEEcCCCCHHHHHHHHHhcceeeeccccccCCCcccceeeeecCCCCCCCCCCCCCCCCceEEec------------
Q 003025 412 EPVVFIDKPVTLSERAAYYTIAECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVS------------ 479 (856)
Q Consensus 412 ~pvv~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~g~lV~S------------ 479 (856)
.+..+.+ +...+|++||++|.+| |.+.+|+++|+. |+|++
T Consensus 253 -~v~~~~~-----~~~~~l~aADl~V~~S-----Gt~tlEa~a~G~-----------------P~Vv~yk~~pl~~~~~~ 304 (385)
T TIGR00215 253 -QLHLIDG-----DARKAMFAADAALLAS-----GTAALEAALIKT-----------------PMVVGYRMKPLTFLIAR 304 (385)
T ss_pred -cEEEECc-----hHHHHHHhCCEEeecC-----CHHHHHHHHcCC-----------------CEEEEEcCCHHHHHHHH
Confidence 2444433 3457999999999999 667779999966 55555
Q ss_pred -----CCcccccccCC-c----eeeCCCCHHHHHHHHHHHHcCC
Q 003025 480 -----EFIGCSPSLSG-A----IRVNPWNIEATAEAMHEAIQMN 513 (856)
Q Consensus 480 -----e~~G~~~~l~~-a----l~VnP~d~~~~A~ai~~aL~m~ 513 (856)
.+.+....+.+ + ++-+-.+++.+++++.+.|+.+
T Consensus 305 ~~~~~~~~~~~nil~~~~~~pel~q~~~~~~~l~~~~~~ll~~~ 348 (385)
T TIGR00215 305 RLVKTDYISLPNILANRLLVPELLQEECTPHPLAIALLLLLENG 348 (385)
T ss_pred HHHcCCeeeccHHhcCCccchhhcCCCCCHHHHHHHHHHHhcCC
Confidence 13333333422 1 2224457899999999999865
|
Lipid-A precursor biosynthesis producing lipid A disaccharide in a condensation reaction. transcribed as part of an operon including lpxA |
| >TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457 | Back alignment and domain information |
|---|
Probab=98.31 E-value=4e-06 Score=89.44 Aligned_cols=53 Identities=15% Similarity=0.273 Sum_probs=44.5
Q ss_pred cEEEEEecCCCCCCCCCCCCCCCHHHHHHHHHHHhhCCCeEEEecC---CChhhHHHhhcC
Q 003025 591 SRAILFDYDGTVMPQTSINKAPSQAVISIINTLCNDARNTVFVVSG---RGRDCLGKWFSP 648 (856)
Q Consensus 591 ~rlI~~DlDGTLl~~~~~~~~~s~~~~~aL~~L~~d~g~~V~I~TG---R~~~~l~~~~~~ 648 (856)
.|+|++|+||||++ .+..++ .+.++|++| ++.|+.|+++|| |+...+.+.+..
T Consensus 1 ~~~~~~D~DGtl~~---~~~~i~-~a~~~l~~l-~~~g~~~~~~Tnn~~r~~~~~~~~l~~ 56 (249)
T TIGR01457 1 YKGYLIDLDGTMYK---GKERIP-EAETFVHEL-QKRDIPYLFVTNNSTRTPESVAEMLAS 56 (249)
T ss_pred CCEEEEeCCCceEc---CCeeCc-CHHHHHHHH-HHCCCeEEEEeCCCCCCHHHHHHHHHH
Confidence 36899999999998 555454 789999997 888999999995 889888887754
|
This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those. |
| >PRK13222 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.30 E-value=9e-07 Score=92.55 Aligned_cols=80 Identities=23% Similarity=0.290 Sum_probs=60.7
Q ss_pred EEEEcCeEEEEEeCCCCHHHHHHHHHHHhhhcCCCcceEEEEeCCchhHHHHHHccccccCCCCCCCccEEEEEeCCC--
Q 003025 741 AVKSGQFIVEVKPQGVSKGVVAEKIFTTMAESGRHADFVLCIGDDRSDEDMFEIIGNATSSGVLSSNASVFACTVGQK-- 818 (856)
Q Consensus 741 ~v~~g~~~vEI~p~gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~-- 818 (856)
.+..+..+-+.+| |..+++.+++++ +++++++++|||+.+|+++.+.+|.. ++.|..|..
T Consensus 138 ~~~~~~~~~~~kp----~~~~~~~~~~~~---~~~~~~~i~igD~~~Di~~a~~~g~~-----------~i~v~~g~~~~ 199 (226)
T PRK13222 138 VVIGGDSLPNKKP----DPAPLLLACEKL---GLDPEEMLFVGDSRNDIQAARAAGCP-----------SVGVTYGYNYG 199 (226)
T ss_pred EEEcCCCCCCCCc----ChHHHHHHHHHc---CCChhheEEECCCHHHHHHHHHCCCc-----------EEEECcCCCCc
Confidence 3444443333444 678899999999 99999999999999999999999973 356666642
Q ss_pred ----ccccceEcCChhHHHHHHHH
Q 003025 819 ----PSKAKYYLDDAAEVVTMLEA 838 (856)
Q Consensus 819 ----~s~A~y~l~~~~eV~~~L~~ 838 (856)
...+.|++++..++..+|..
T Consensus 200 ~~~~~~~~~~~i~~~~~l~~~l~~ 223 (226)
T PRK13222 200 EPIALSEPDVVIDHFAELLPLLGL 223 (226)
T ss_pred cchhhcCCCEEECCHHHHHHHHHH
Confidence 23577999999998887753
|
|
| >PLN02645 phosphoglycolate phosphatase | Back alignment and domain information |
|---|
Probab=98.29 E-value=1.9e-05 Score=87.19 Aligned_cols=71 Identities=14% Similarity=0.255 Sum_probs=51.5
Q ss_pred CCHHHHHHHHHcCCcEEEEEecCCCCCCCCCCCCCCCHHHHHHHHHHHhhCCCeEEEecCCChhhHHHhhcCCCCccE
Q 003025 577 LSIDAIVSAYLRSKSRAILFDYDGTVMPQTSINKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSPCKKLGI 654 (856)
Q Consensus 577 l~~~~i~~~y~~s~~rlI~~DlDGTLl~~~~~~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~~~~lgl 654 (856)
+..+++.+.-. .+++|+||+||||+. .+ .+-+.+.++|++| ++.|.+++++|+|+......++..+..+|+
T Consensus 16 ~~~~~~~~~~~--~~~~~~~D~DGtl~~---~~-~~~~ga~e~l~~l-r~~g~~~~~~TN~~~~~~~~~~~~l~~lGi 86 (311)
T PLN02645 16 LTLENADELID--SVETFIFDCDGVIWK---GD-KLIEGVPETLDML-RSMGKKLVFVTNNSTKSRAQYGKKFESLGL 86 (311)
T ss_pred CCHHHHHHHHH--hCCEEEEeCcCCeEe---CC-ccCcCHHHHHHHH-HHCCCEEEEEeCCCCCCHHHHHHHHHHCCC
Confidence 44444444322 478999999999998 44 4558889999997 888999999999996665555544334443
|
|
| >PRK13223 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.29 E-value=1.2e-06 Score=94.80 Aligned_cols=70 Identities=19% Similarity=0.172 Sum_probs=56.4
Q ss_pred CCCCHHHHHHHHHHHhhhcCCCcceEEEEeCCchhHHHHHHccccccCCCCCCCccEEEEEeCCC------ccccceEcC
Q 003025 754 QGVSKGVVAEKIFTTMAESGRHADFVLCIGDDRSDEDMFEIIGNATSSGVLSSNASVFACTVGQK------PSKAKYYLD 827 (856)
Q Consensus 754 ~gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~------~s~A~y~l~ 827 (856)
.+-.|...++.+++++ |++++++++|||+.+|+.+.+.+|.. +++|+.|.. ...+.++++
T Consensus 155 ~~Kp~p~~~~~~~~~~---g~~~~~~l~IGD~~~Di~aA~~aGi~-----------~i~v~~G~~~~~~l~~~~~~~vi~ 220 (272)
T PRK13223 155 QKKPDPAALLFVMKMA---GVPPSQSLFVGDSRSDVLAAKAAGVQ-----------CVALSYGYNHGRPIAEESPALVID 220 (272)
T ss_pred CCCCCcHHHHHHHHHh---CCChhHEEEECCCHHHHHHHHHCCCe-----------EEEEecCCCCchhhhhcCCCEEEC
Confidence 3444778899999999 99999999999999999999999973 467777632 246888999
Q ss_pred ChhHHHHHHH
Q 003025 828 DAAEVVTMLE 837 (856)
Q Consensus 828 ~~~eV~~~L~ 837 (856)
+..++.+++.
T Consensus 221 ~l~el~~~~~ 230 (272)
T PRK13223 221 DLRALLPGCA 230 (272)
T ss_pred CHHHHHHHHh
Confidence 9988876544
|
|
| >TIGR00338 serB phosphoserine phosphatase SerB | Back alignment and domain information |
|---|
Probab=98.28 E-value=7.9e-06 Score=85.20 Aligned_cols=62 Identities=18% Similarity=0.316 Sum_probs=49.3
Q ss_pred CHHHHHHHHHHHhhhcCCCcceEEEEeCCchhHHHHHHccccccCCCCCCCccEEEEEeCCC---ccccceEcCC--hhH
Q 003025 757 SKGVVAEKIFTTMAESGRHADFVLCIGDDRSDEDMFEIIGNATSSGVLSSNASVFACTVGQK---PSKAKYYLDD--AAE 831 (856)
Q Consensus 757 sKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~---~s~A~y~l~~--~~e 831 (856)
.|+..++.+++++ +++++++++|||+.+|+++.+.+|.. +.++.. +..|+|++.+ ..+
T Consensus 152 ~k~~~~~~~~~~~---~~~~~~~i~iGDs~~Di~aa~~ag~~--------------i~~~~~~~~~~~a~~~i~~~~~~~ 214 (219)
T TIGR00338 152 YKGKTLLILLRKE---GISPENTVAVGDGANDLSMIKAAGLG--------------IAFNAKPKLQQKADICINKKDLTD 214 (219)
T ss_pred ccHHHHHHHHHHc---CCCHHHEEEEECCHHHHHHHHhCCCe--------------EEeCCCHHHHHhchhccCCCCHHH
Confidence 4899999999998 99999999999999999999999863 344432 4678888764 455
Q ss_pred HHHH
Q 003025 832 VVTM 835 (856)
Q Consensus 832 V~~~ 835 (856)
++.+
T Consensus 215 ~~~~ 218 (219)
T TIGR00338 215 ILPL 218 (219)
T ss_pred HHhh
Confidence 5554
|
Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins. |
| >TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family | Back alignment and domain information |
|---|
Probab=98.27 E-value=8.5e-06 Score=88.47 Aligned_cols=59 Identities=15% Similarity=0.320 Sum_probs=43.7
Q ss_pred cEEEEEecCCCCCCCCCCCCCCCHHHHHHHHHHHhhCCCeEEEecCCChhhHHHhhcCCCCccE
Q 003025 591 SRAILFDYDGTVMPQTSINKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSPCKKLGI 654 (856)
Q Consensus 591 ~rlI~~DlDGTLl~~~~~~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~~~~lgl 654 (856)
+++|+||+||||++ ... +.+.+.++|++| +++|..|+++|+|+......++..+..+|+
T Consensus 2 ~~~~~~D~DGtl~~---~~~-~~~ga~e~l~~L-~~~g~~~~~~Tnns~~~~~~~~~~l~~~G~ 60 (279)
T TIGR01452 2 AQGFIFDCDGVLWL---GER-VVPGAPELLDRL-ARAGKAALFVTNNSTKSRAEYALKFARLGF 60 (279)
T ss_pred ccEEEEeCCCceEc---CCe-eCcCHHHHHHHH-HHCCCeEEEEeCCCCCCHHHHHHHHHHcCC
Confidence 67999999999998 443 455589999998 788999999999876555444433333443
|
This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association. |
| >TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal | Back alignment and domain information |
|---|
Probab=98.21 E-value=1.8e-05 Score=81.06 Aligned_cols=38 Identities=24% Similarity=0.422 Sum_probs=35.8
Q ss_pred CHHHHHHHHHHHhhhcCCCcceEEEEeCCchhHHHHHHccc
Q 003025 757 SKGVVAEKIFTTMAESGRHADFVLCIGDDRSDEDMFEIIGN 797 (856)
Q Consensus 757 sKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~ 797 (856)
+|+.+++.+++.+ +++++++++|||+.+|++|++.+|.
T Consensus 147 ~k~~~~~~~~~~~---~~~~~~~i~iGDs~~D~~~a~~ag~ 184 (201)
T TIGR01491 147 NKGEAVERLKREL---NPSLTETVAVGDSKNDLPMFEVADI 184 (201)
T ss_pred cHHHHHHHHHHHh---CCCHHHEEEEcCCHhHHHHHHhcCC
Confidence 5999999999988 9999999999999999999999996
|
This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog. |
| >TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic | Back alignment and domain information |
|---|
Probab=98.20 E-value=1e-06 Score=91.22 Aligned_cols=64 Identities=16% Similarity=0.135 Sum_probs=52.3
Q ss_pred HHHHHHHHHHHhhhcCCCcceEEEEeCCchhHHHHHHccccccCCCCCCCccEEEEEeCCC------ccccceEcCChhH
Q 003025 758 KGVVAEKIFTTMAESGRHADFVLCIGDDRSDEDMFEIIGNATSSGVLSSNASVFACTVGQK------PSKAKYYLDDAAE 831 (856)
Q Consensus 758 KG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~------~s~A~y~l~~~~e 831 (856)
+...+..+++++ |++++++++|||+.+|+.+.+.+|.. ++.|..|.. ...|.|++++..+
T Consensus 143 ~p~~~~~~~~~~---~~~~~~~~~igDs~~d~~aa~~aG~~-----------~i~v~~g~~~~~~l~~~~a~~~i~~~~~ 208 (213)
T TIGR01449 143 HPDPLLLAAERL---GVAPQQMVYVGDSRVDIQAARAAGCP-----------SVLLTYGYRYGEAIDLLPPDVLYDSLNE 208 (213)
T ss_pred ChHHHHHHHHHc---CCChhHeEEeCCCHHHHHHHHHCCCe-----------EEEEccCCCCCcchhhcCCCeEeCCHHH
Confidence 577899999999 99999999999999999999999973 355655642 2468889999888
Q ss_pred HHHH
Q 003025 832 VVTM 835 (856)
Q Consensus 832 V~~~ 835 (856)
+..+
T Consensus 209 l~~~ 212 (213)
T TIGR01449 209 LPPL 212 (213)
T ss_pred HHhh
Confidence 7654
|
This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702). |
| >COG1519 KdtA 3-deoxy-D-manno-octulosonic-acid transferase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=98.18 E-value=0.00075 Score=75.15 Aligned_cols=299 Identities=21% Similarity=0.293 Sum_probs=173.2
Q ss_pred HHHHHHHHHHHHHHcCCCCCEEEEeCcc----cchHHHH--HHhhcCCCeEEEEEccC---------CCChHHHhcCCch
Q 003025 183 VSANKIFSQRVIEVINPEDDYVWIHDYH----LMVLPTF--LRRRFTRLRMGFFLHSP---------FPSSEIYRTLPVR 247 (856)
Q Consensus 183 ~~vN~~fa~~i~~~~~~~~D~VwihDyh----l~llp~~--lr~~~~~~~i~~flH~P---------fP~~e~~~~lp~r 247 (856)
.+.+++|+ .......|++..||+|-=- ...+|-. ||+++|+.+|..+.-+| |+..-..+-+|..
T Consensus 32 ~r~~eRfg-~~~~~~~~~~p~vWiHaaSVGEv~a~~pLv~~l~~~~P~~~ilvTt~T~Tg~e~a~~~~~~~v~h~YlP~D 110 (419)
T COG1519 32 KRLGERFG-FYKPPVKPEGPLVWIHAASVGEVLAALPLVRALRERFPDLRILVTTMTPTGAERAAALFGDSVIHQYLPLD 110 (419)
T ss_pred HHHHHHhc-ccCCCCCCCCCeEEEEecchhHHHHHHHHHHHHHHhCCCCCEEEEecCccHHHHHHHHcCCCeEEEecCcC
Confidence 45677777 1223345667899999655 3445544 89999999999888765 2222222334422
Q ss_pred H-HHHHHhH---hCCEEcccCHHHHHHHHHHHHhhhCceecccCceeeEEECCEE---------------------EEEE
Q 003025 248 E-EILKALL---NADLIGFHTFDYARHFLSCCSRMLGLEYQSKRGYIGLEYYGRT---------------------VGIK 302 (856)
Q Consensus 248 ~-eil~~ll---~~dligf~t~~~~~~Fl~~~~r~lg~~~~~~~~~~~~~~~gr~---------------------~~i~ 302 (856)
. -..+..| ..|+.-|---+.=-|++..|.+. |+. .+-.|+|- +..-
T Consensus 111 ~~~~v~rFl~~~~P~l~Ii~EtElWPnli~e~~~~-~~p--------~~LvNaRLS~rS~~~y~k~~~~~~~~~~~i~li 181 (419)
T COG1519 111 LPIAVRRFLRKWRPKLLIIMETELWPNLINELKRR-GIP--------LVLVNARLSDRSFARYAKLKFLARLLFKNIDLI 181 (419)
T ss_pred chHHHHHHHHhcCCCEEEEEeccccHHHHHHHHHc-CCC--------EEEEeeeechhhhHHHHHHHHHHHHHHHhccee
Confidence 1 1122222 33444443333334444444331 111 01111111 0111
Q ss_pred EeecccCchHHHHHh---------------cCchHHHHHHHHHHHcCC-CeEEEeccCccccCCHH-HHHHHHHHHHHhC
Q 003025 303 IMPVGIHMGQIESVL---------------RLADKDWRVQELKQQFEG-KTVLLGVDDMDIFKGVD-LKLLAMEHLLKQH 365 (856)
Q Consensus 303 i~p~GId~~~~~~~~---------------~~~~~~~~~~~l~~~~~~-k~iil~VdRld~~KGi~-~~l~A~~~ll~~~ 365 (856)
+.-.-+|.++|...- ..+........+|.++++ +++++..+. ..|=. ..+.|+..+++++
T Consensus 182 ~aQse~D~~Rf~~LGa~~v~v~GNlKfd~~~~~~~~~~~~~~r~~l~~~r~v~iaaST---H~GEeei~l~~~~~l~~~~ 258 (419)
T COG1519 182 LAQSEEDAQRFRSLGAKPVVVTGNLKFDIEPPPQLAAELAALRRQLGGHRPVWVAAST---HEGEEEIILDAHQALKKQF 258 (419)
T ss_pred eecCHHHHHHHHhcCCcceEEecceeecCCCChhhHHHHHHHHHhcCCCCceEEEecC---CCchHHHHHHHHHHHHhhC
Confidence 122233333333221 123344566778888877 899998887 33444 4788999999999
Q ss_pred CCCcCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCC-------CcccEEEEcCCCCHHHHHHHHHhcceeee
Q 003025 366 PKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRP-------GYEPVVFIDKPVTLSERAAYYTIAECVVV 438 (856)
Q Consensus 366 p~~~~~vvLvqi~~p~r~~~~~~~~l~~~~~~lv~~IN~~~~~~-------~~~pvv~~~~~v~~~el~aly~~ADv~vv 438 (856)
|+.. |+ ++ | +.++ =-..+++++++.|-+++.- ..++|++.+ +.-|+..||++||++.|
T Consensus 259 ~~~l----lI-lV-P---RHpE---Rf~~v~~l~~~~gl~~~~rS~~~~~~~~tdV~l~D---tmGEL~l~y~~adiAFV 323 (419)
T COG1519 259 PNLL----LI-LV-P---RHPE---RFKAVENLLKRKGLSVTRRSQGDPPFSDTDVLLGD---TMGELGLLYGIADIAFV 323 (419)
T ss_pred CCce----EE-Ee-c---CChh---hHHHHHHHHHHcCCeEEeecCCCCCCCCCcEEEEe---cHhHHHHHHhhccEEEE
Confidence 9753 33 33 2 3333 3467888888888776431 223555444 36899999999999876
Q ss_pred ccc---cccCCCcccceeeeecCCCCCCCCCCCCCCCCceEEecCC----ccccccc---CCceeeCCCCHHHHHHHHHH
Q 003025 439 TAV---RDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEF----IGCSPSL---SGAIRVNPWNIEATAEAMHE 508 (856)
Q Consensus 439 tS~---~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~g~lV~Se~----~G~~~~l---~~al~VnP~d~~~~A~ai~~ 508 (856)
--. .-|.| ++|..+++. |+|.-.+ .-+.+.| ++++.|+. .+.++.++..
T Consensus 324 GGSlv~~GGHN--~LEpa~~~~-----------------pvi~Gp~~~Nf~ei~~~l~~~ga~~~v~~--~~~l~~~v~~ 382 (419)
T COG1519 324 GGSLVPIGGHN--PLEPAAFGT-----------------PVIFGPYTFNFSDIAERLLQAGAGLQVED--ADLLAKAVEL 382 (419)
T ss_pred CCcccCCCCCC--hhhHHHcCC-----------------CEEeCCccccHHHHHHHHHhcCCeEEECC--HHHHHHHHHH
Confidence 543 33444 689999843 7776543 3344444 24677764 7788888877
Q ss_pred HHcCCHHHHHHHHHHHhhhhhcC
Q 003025 509 AIQMNEAEKQLRHEKHYRYVSTH 531 (856)
Q Consensus 509 aL~m~~~er~~r~~~~~~~v~~~ 531 (856)
.++. +.+|+.+.++....+.++
T Consensus 383 l~~~-~~~r~~~~~~~~~~v~~~ 404 (419)
T COG1519 383 LLAD-EDKREAYGRAGLEFLAQN 404 (419)
T ss_pred hcCC-HHHHHHHHHHHHHHHHHh
Confidence 7764 777777777778777765
|
|
| >TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like | Back alignment and domain information |
|---|
Probab=98.17 E-value=5.5e-06 Score=83.09 Aligned_cols=41 Identities=22% Similarity=0.439 Sum_probs=36.9
Q ss_pred EeCCCCHHHHHHHHHHHhhhcCCCcceEEEEeCCchhHHHHHHc
Q 003025 752 KPQGVSKGVVAEKIFTTMAESGRHADFVLCIGDDRSDEDMFEII 795 (856)
Q Consensus 752 ~p~gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~a 795 (856)
.+.+.+|+.+++.+++.+ +++++++++|||+.||++|++.+
T Consensus 137 ~~~~~~K~~~l~~~~~~~---~~~~~~~~~iGDs~~D~~~~~~a 177 (177)
T TIGR01488 137 NPEGECKGKVLKELLEES---KITLKKIIAVGDSVNDLPMLKLA 177 (177)
T ss_pred cCCcchHHHHHHHHHHHh---CCCHHHEEEEeCCHHHHHHHhcC
Confidence 366788999999999888 89999999999999999999864
|
Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences. |
| >PRK13478 phosphonoacetaldehyde hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=98.14 E-value=2.1e-05 Score=84.82 Aligned_cols=72 Identities=13% Similarity=0.077 Sum_probs=57.9
Q ss_pred HHHHHHHHHHHhhhcCCC-cceEEEEeCCchhHHHHHHccccccCCCCCCCccEEEEEeCCC------------------
Q 003025 758 KGVVAEKIFTTMAESGRH-ADFVLCIGDDRSDEDMFEIIGNATSSGVLSSNASVFACTVGQK------------------ 818 (856)
Q Consensus 758 KG~al~~Ll~~l~~~gi~-~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~------------------ 818 (856)
+...+..+++++ |+. ++++++|||+.+|+.+-+.+|.. +++|+.|..
T Consensus 160 ~p~~~~~a~~~l---~~~~~~e~l~IGDs~~Di~aA~~aG~~-----------~i~v~~g~~~~~~~~~~~~~~~~~~~~ 225 (267)
T PRK13478 160 YPWMALKNAIEL---GVYDVAACVKVDDTVPGIEEGLNAGMW-----------TVGVILSGNELGLSEEEYQALSAAELA 225 (267)
T ss_pred ChHHHHHHHHHc---CCCCCcceEEEcCcHHHHHHHHHCCCE-----------EEEEccCcccccCCHHHHHhcCHHHHH
Confidence 567788888988 885 69999999999999999999973 467777642
Q ss_pred -----------ccccceEcCChhHHHHHHHHHHHhc
Q 003025 819 -----------PSKAKYYLDDAAEVVTMLEALAEAS 843 (856)
Q Consensus 819 -----------~s~A~y~l~~~~eV~~~L~~L~~~~ 843 (856)
...|.+++++..++..+|+.+....
T Consensus 226 ~~~~~~~~~l~~~~a~~vi~~~~~l~~~l~~~~~~~ 261 (267)
T PRK13478 226 ARRERARARLRAAGAHYVIDTIADLPAVIADIEARL 261 (267)
T ss_pred HHHHHHHHHHHHcCCCeehhhHHHHHHHHHHHHHHH
Confidence 2458899999999999887765433
|
|
| >PLN02770 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=98.10 E-value=7.1e-06 Score=87.52 Aligned_cols=77 Identities=18% Similarity=0.121 Sum_probs=57.3
Q ss_pred CCCeEEEEcCeEEEEEeCCCCHHHHHHHHHHHhhhcCCCcceEEEEeCCchhHHHHHHccccccCCCCCCCccEEEEEeC
Q 003025 737 NEPAAVKSGQFIVEVKPQGVSKGVVAEKIFTTMAESGRHADFVLCIGDDRSDEDMFEIIGNATSSGVLSSNASVFACTVG 816 (856)
Q Consensus 737 ~~~~~v~~g~~~vEI~p~gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG 816 (856)
++...++.+...-.-+| +......+++++ +++++++++|||+.+|+..-+.+|.. +++|..|
T Consensus 149 ~~Fd~iv~~~~~~~~KP----~p~~~~~a~~~~---~~~~~~~l~vgDs~~Di~aA~~aGi~-----------~i~v~~g 210 (248)
T PLN02770 149 DFFQAVIIGSECEHAKP----HPDPYLKALEVL---KVSKDHTFVFEDSVSGIKAGVAAGMP-----------VVGLTTR 210 (248)
T ss_pred hhCcEEEecCcCCCCCC----ChHHHHHHHHHh---CCChhHEEEEcCCHHHHHHHHHCCCE-----------EEEEeCC
Confidence 33334444443333355 677889999999 99999999999999999999999973 4567666
Q ss_pred CC-----ccccceEcCChhH
Q 003025 817 QK-----PSKAKYYLDDAAE 831 (856)
Q Consensus 817 ~~-----~s~A~y~l~~~~e 831 (856)
.. ...|.+++++..+
T Consensus 211 ~~~~~l~~~~a~~vi~~~~e 230 (248)
T PLN02770 211 NPESLLMEAKPTFLIKDYED 230 (248)
T ss_pred CCHHHHhhcCCCEEeccchh
Confidence 42 2468899988877
|
|
| >PLN02954 phosphoserine phosphatase | Back alignment and domain information |
|---|
Probab=98.09 E-value=3.7e-05 Score=80.45 Aligned_cols=66 Identities=20% Similarity=0.303 Sum_probs=49.1
Q ss_pred CCCCHHHHHHHHHHHhhhcCCCcceEEEEeCCchhHHHHHHccccccCCCCCCCccEEEEEeCCC------ccccceEcC
Q 003025 754 QGVSKGVVAEKIFTTMAESGRHADFVLCIGDDRSDEDMFEIIGNATSSGVLSSNASVFACTVGQK------PSKAKYYLD 827 (856)
Q Consensus 754 ~gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~------~s~A~y~l~ 827 (856)
.+..|..+++.+++++ +. +++++|||+.||+.|.+.++.. +.+++|.. ...|+|+++
T Consensus 152 ~~~~K~~~i~~~~~~~---~~--~~~i~iGDs~~Di~aa~~~~~~------------~~~~~~~~~~~~~~~~~~~~~i~ 214 (224)
T PLN02954 152 RSGGKAEAVQHIKKKH---GY--KTMVMIGDGATDLEARKPGGAD------------LFIGYGGVQVREAVAAKADWFVT 214 (224)
T ss_pred CCccHHHHHHHHHHHc---CC--CceEEEeCCHHHHHhhhcCCCC------------EEEecCCCccCHHHHhcCCEEEC
Confidence 3456999999998877 54 6899999999999997776542 34555532 235889999
Q ss_pred ChhHHHHHH
Q 003025 828 DAAEVVTML 836 (856)
Q Consensus 828 ~~~eV~~~L 836 (856)
+..++.++|
T Consensus 215 ~~~el~~~~ 223 (224)
T PLN02954 215 DFQDLIEVL 223 (224)
T ss_pred CHHHHHHhh
Confidence 998887754
|
|
| >TIGR01689 EcbF-BcbF capsule biosynthesis phosphatase | Back alignment and domain information |
|---|
Probab=98.04 E-value=8e-06 Score=77.16 Aligned_cols=51 Identities=22% Similarity=0.296 Sum_probs=41.3
Q ss_pred EEEEEecCCCCCCCCC---CCCCCCHHHHHHHHHHHhhCCCeEEEecCCChhhHH
Q 003025 592 RAILFDYDGTVMPQTS---INKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLG 643 (856)
Q Consensus 592 rlI~~DlDGTLl~~~~---~~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~ 643 (856)
|+|++|+||||+.... ....+.++++++|++| ++.|+.|+++|||+.....
T Consensus 2 K~i~~DiDGTL~~~~~~~y~~~~~~~~~ie~L~~l-~~~G~~IiiaTGR~~~~~~ 55 (126)
T TIGR01689 2 KRLVMDLDNTITLTENGDYANVAPILAVIEKLRHY-KALGFEIVISSSRNMRTYE 55 (126)
T ss_pred CEEEEeCCCCcccCCCCcccccccCHHHHHHHHHH-HHCCCEEEEECCCCchhhh
Confidence 7999999999997321 1134779999999997 7789999999999987654
|
Due to the likelihood that the substrates of these enzymes are different depending on the nature of the particular polysaccharides associated with each species, this model has been classified as a subfamily despite the close homology. |
| >PF13524 Glyco_trans_1_2: Glycosyl transferases group 1 | Back alignment and domain information |
|---|
Probab=98.00 E-value=1.3e-05 Score=71.42 Aligned_cols=87 Identities=20% Similarity=0.258 Sum_probs=71.4
Q ss_pred eeeeccccccCCCcccceeeeecCCCCCCCCCCCCCCCCceEEecCCcccccccC-C--ceeeCCCCHHHHHHHHHHHHc
Q 003025 435 CVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIGCSPSLS-G--AIRVNPWNIEATAEAMHEAIQ 511 (856)
Q Consensus 435 v~vvtS~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~-~--al~VnP~d~~~~A~ai~~aL~ 511 (856)
+++.|+..+|++...+|+||| ++|+|.+...+..+.+. + ++.++ |++++++++..+|+
T Consensus 1 i~Ln~~~~~~~~~r~~E~~a~-----------------G~~vi~~~~~~~~~~~~~~~~~~~~~--~~~el~~~i~~ll~ 61 (92)
T PF13524_consen 1 INLNPSRSDGPNMRIFEAMAC-----------------GTPVISDDSPGLREIFEDGEHIITYN--DPEELAEKIEYLLE 61 (92)
T ss_pred CEeeCCCCCCCchHHHHHHHC-----------------CCeEEECChHHHHHHcCCCCeEEEEC--CHHHHHHHHHHHHC
Confidence 467788889999999999999 44888887888888883 2 67777 99999999999998
Q ss_pred CCHHHHHHHHHHHhhhhh-cCCHHHHHHHHH
Q 003025 512 MNEAEKQLRHEKHYRYVS-THDVAYWARSFF 541 (856)
Q Consensus 512 m~~~er~~r~~~~~~~v~-~~~~~~W~~~~l 541 (856)
.+++++...++.+++|. .|++.+-++.|+
T Consensus 62 -~~~~~~~ia~~a~~~v~~~~t~~~~~~~il 91 (92)
T PF13524_consen 62 -NPEERRRIAKNARERVLKRHTWEHRAEQIL 91 (92)
T ss_pred -CHHHHHHHHHHHHHHHHHhCCHHHHHHHHH
Confidence 55677777777888887 688888888776
|
|
| >PRK06769 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=97.99 E-value=3.8e-05 Score=77.28 Aligned_cols=65 Identities=12% Similarity=0.126 Sum_probs=50.8
Q ss_pred HHHHHHHHHHHhhhcCCCcceEEEEeCCchhHHHHHHccccccCCCCCCCccEEEEEeCCC------------ccccceE
Q 003025 758 KGVVAEKIFTTMAESGRHADFVLCIGDDRSDEDMFEIIGNATSSGVLSSNASVFACTVGQK------------PSKAKYY 825 (856)
Q Consensus 758 KG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~------------~s~A~y~ 825 (856)
+......+++++ +.+++++++|||+.+|+..-+.+|.. ++.|..|.. ...+.|+
T Consensus 95 ~p~~~~~~~~~l---~~~p~~~i~IGD~~~Di~aA~~aGi~-----------~i~v~~g~~~~~~~~~~~~l~~~~~~~~ 160 (173)
T PRK06769 95 STGMLLQAAEKH---GLDLTQCAVIGDRWTDIVAAAKVNAT-----------TILVRTGAGYDALHTYRDKWAHIEPNYI 160 (173)
T ss_pred CHHHHHHHHHHc---CCCHHHeEEEcCCHHHHHHHHHCCCe-----------EEEEecCCCchhhhhhhcccccCCCcch
Confidence 556677788888 89999999999999999999999973 466776642 1346677
Q ss_pred cCChhHHHHHH
Q 003025 826 LDDAAEVVTML 836 (856)
Q Consensus 826 l~~~~eV~~~L 836 (856)
+++..++..+|
T Consensus 161 ~~~~~el~~~l 171 (173)
T PRK06769 161 AENFEDAVNWI 171 (173)
T ss_pred hhCHHHHHHHH
Confidence 88888887764
|
|
| >TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase | Back alignment and domain information |
|---|
Probab=97.98 E-value=1.3e-05 Score=85.69 Aligned_cols=65 Identities=18% Similarity=0.169 Sum_probs=52.0
Q ss_pred HHHHHHHHHHHhhhcCCC-cceEEEEeCCchhHHHHHHccccccCCCCCCCccEEEEEeCCC------------------
Q 003025 758 KGVVAEKIFTTMAESGRH-ADFVLCIGDDRSDEDMFEIIGNATSSGVLSSNASVFACTVGQK------------------ 818 (856)
Q Consensus 758 KG~al~~Ll~~l~~~gi~-~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~------------------ 818 (856)
+......+++++ |+. ++++++|||+.+|+.+-+.+|.. +++|+.|..
T Consensus 158 ~p~~~~~a~~~l---~~~~~~~~l~IGDs~~Di~aA~~aGi~-----------~i~v~~g~~~~~~~~~~~~~~~~~~~~ 223 (253)
T TIGR01422 158 APWMALKNAIEL---GVYDVAACVKVGDTVPDIEEGRNAGMW-----------TVGLILSSNELGLSEEEYRALDPAELE 223 (253)
T ss_pred CHHHHHHHHHHc---CCCCchheEEECCcHHHHHHHHHCCCe-----------EEEEecCCcccCCCHHHHHhCCHHHHH
Confidence 567788888888 885 89999999999999999999973 467777743
Q ss_pred -----------ccccceEcCChhHHHHHH
Q 003025 819 -----------PSKAKYYLDDAAEVVTML 836 (856)
Q Consensus 819 -----------~s~A~y~l~~~~eV~~~L 836 (856)
...|++++++..++..+|
T Consensus 224 ~~~~~~~~~l~~~~~~~v~~~~~el~~~~ 252 (253)
T TIGR01422 224 ARRAEATARLKAAGAHYVIDTLAELPAVI 252 (253)
T ss_pred HHHHHHHHHHHhcCCCEehhcHHHHHHhh
Confidence 245788888888876554
|
This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent. |
| >PRK10826 2-deoxyglucose-6-phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.95 E-value=4.8e-05 Score=79.57 Aligned_cols=62 Identities=10% Similarity=0.014 Sum_probs=47.3
Q ss_pred HHHHHHHHHHHhhhcCCCcceEEEEeCCchhHHHHHHccccccCCCCCCCccEEEEEeCCCc-----cccceEcCChhHH
Q 003025 758 KGVVAEKIFTTMAESGRHADFVLCIGDDRSDEDMFEIIGNATSSGVLSSNASVFACTVGQKP-----SKAKYYLDDAAEV 832 (856)
Q Consensus 758 KG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~~-----s~A~y~l~~~~eV 832 (856)
+...++.+++++ |++++++++|||+.+|+++.+.+|.. ++.+.-+... ..|.+++.+..++
T Consensus 150 ~~~~~~~~~~~~---~~~~~~~~~igDs~~Di~aA~~aG~~-----------~i~v~~~~~~~~~~~~~~~~~~~~~~dl 215 (222)
T PRK10826 150 HPEVYLNCAAKL---GVDPLTCVALEDSFNGMIAAKAARMR-----------SIVVPAPEQQNDPRWALADVKLESLTEL 215 (222)
T ss_pred CHHHHHHHHHHc---CCCHHHeEEEcCChhhHHHHHHcCCE-----------EEEecCCccCchhhhhhhheeccCHHHH
Confidence 667899999999 99999999999999999999999973 2334333221 2567777777665
Q ss_pred H
Q 003025 833 V 833 (856)
Q Consensus 833 ~ 833 (856)
.
T Consensus 216 ~ 216 (222)
T PRK10826 216 T 216 (222)
T ss_pred h
Confidence 3
|
|
| >PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated | Back alignment and domain information |
|---|
Probab=97.95 E-value=4.6e-05 Score=77.18 Aligned_cols=66 Identities=18% Similarity=0.153 Sum_probs=51.3
Q ss_pred HHHHHHHHHHHhhhcCCCcceEEEEeCCchhHHHHHHccccccCCCCCCCccEEEEEeCCC-----cccc--ceEcCChh
Q 003025 758 KGVVAEKIFTTMAESGRHADFVLCIGDDRSDEDMFEIIGNATSSGVLSSNASVFACTVGQK-----PSKA--KYYLDDAA 830 (856)
Q Consensus 758 KG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~-----~s~A--~y~l~~~~ 830 (856)
+......+++.+ |.+++++++|||+.+|+.+.+.+|.. ++.|..|.. ...+ .+++++..
T Consensus 105 ~p~~~~~~~~~l---~~~~~~~~~VgDs~~Di~~A~~aG~~-----------~i~v~~g~~~~~~~~~~~~~~~ii~~l~ 170 (181)
T PRK08942 105 KPGMLLSIAERL---NIDLAGSPMVGDSLRDLQAAAAAGVT-----------PVLVRTGKGVTTLAEGAAPGTWVLDSLA 170 (181)
T ss_pred CHHHHHHHHHHc---CCChhhEEEEeCCHHHHHHHHHCCCe-----------EEEEcCCCCchhhhcccCCCceeecCHH
Confidence 566777888888 99999999999999999999999963 356666642 2345 78888888
Q ss_pred HHHHHHH
Q 003025 831 EVVTMLE 837 (856)
Q Consensus 831 eV~~~L~ 837 (856)
++.++|.
T Consensus 171 el~~~l~ 177 (181)
T PRK08942 171 DLPQALK 177 (181)
T ss_pred HHHHHHH
Confidence 8877664
|
|
| >TIGR03351 PhnX-like phosphonatase-like hydrolase | Back alignment and domain information |
|---|
Probab=97.95 E-value=6.7e-05 Score=78.26 Aligned_cols=65 Identities=17% Similarity=0.172 Sum_probs=51.7
Q ss_pred HHHHHHHHHHHhhhcCCC-cceEEEEeCCchhHHHHHHccccccCCCCCCCccE-EEEEeCCC------ccccceEcCCh
Q 003025 758 KGVVAEKIFTTMAESGRH-ADFVLCIGDDRSDEDMFEIIGNATSSGVLSSNASV-FACTVGQK------PSKAKYYLDDA 829 (856)
Q Consensus 758 KG~al~~Ll~~l~~~gi~-~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~-~av~vG~~------~s~A~y~l~~~ 829 (856)
+...+..+++++ ++. ++++++|||+.+|+.+-+.+|.. + +.|+.|.. ...|.+++++.
T Consensus 147 ~p~~~~~a~~~~---~~~~~~~~~~igD~~~Di~aa~~aG~~-----------~~i~~~~g~~~~~~~~~~~~~~~i~~~ 212 (220)
T TIGR03351 147 APDLILRAMELT---GVQDVQSVAVAGDTPNDLEAGINAGAG-----------AVVGVLTGAHDAEELSRHPHTHVLDSV 212 (220)
T ss_pred CHHHHHHHHHHc---CCCChhHeEEeCCCHHHHHHHHHCCCC-----------eEEEEecCCCcHHHHhhcCCceeecCH
Confidence 778899999998 887 79999999999999999999974 3 45666532 24577888888
Q ss_pred hHHHHHH
Q 003025 830 AEVVTML 836 (856)
Q Consensus 830 ~eV~~~L 836 (856)
.++..++
T Consensus 213 ~~l~~~~ 219 (220)
T TIGR03351 213 ADLPALL 219 (220)
T ss_pred HHHHHhh
Confidence 8776654
|
This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the |
| >TIGR02919 accessory Sec system glycosyltransferase GtfB | Back alignment and domain information |
|---|
Probab=97.91 E-value=0.00011 Score=84.47 Aligned_cols=132 Identities=8% Similarity=0.133 Sum_probs=98.3
Q ss_pred cCCCeEEEeccCccccCCHHHHHHHHHHHHHhCCCCcCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCcc
Q 003025 333 FEGKTVLLGVDDMDIFKGVDLKLLAMEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYE 412 (856)
Q Consensus 333 ~~~k~iil~VdRld~~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~~~~lv~~IN~~~~~~~~~ 412 (856)
+.++.++++ + ...|+|++.+.++.|++. |=+ |.++ ++..++.++ .+ +.
T Consensus 281 ~~~~~l~~t-----~----s~~I~~i~~Lv~~lPd~~----f~I-ga~t--------e~s~kL~~L-~~---------y~ 328 (438)
T TIGR02919 281 YRKQALILT-----N----SDQIEHLEEIVQALPDYH----FHI-AALT--------EMSSKLMSL-DK---------YD 328 (438)
T ss_pred CcccEEEEC-----C----HHHHHHHHHHHHhCCCcE----EEE-EecC--------cccHHHHHH-Hh---------cC
Confidence 455666666 1 899999999999999976 543 5443 112344444 22 24
Q ss_pred cEEEEcCCCCHHHHHHHHHhcceeeeccccccCCCcccceeeeecCCCCCCCCCCCCCCCCceEEecCC-cccccccCCc
Q 003025 413 PVVFIDKPVTLSERAAYYTIAECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEF-IGCSPSLSGA 491 (856)
Q Consensus 413 pvv~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~g~lV~Se~-~G~~~~l~~a 491 (856)
.++.+.+ +....+..+|..||+++.+|..||++++..||+..+. |+|.-+. .|..+.+.+|
T Consensus 329 nvvly~~-~~~~~l~~ly~~~dlyLdin~~e~~~~al~eA~~~G~-----------------pI~afd~t~~~~~~i~~g 390 (438)
T TIGR02919 329 NVKLYPN-ITTQKIQELYQTCDIYLDINHGNEILNAVRRAFEYNL-----------------LILGFEETAHNRDFIASE 390 (438)
T ss_pred CcEEECC-cChHHHHHHHHhccEEEEccccccHHHHHHHHHHcCC-----------------cEEEEecccCCcccccCC
Confidence 4666665 4456788999999999999999999999999999643 5555554 4555566679
Q ss_pred eeeCCCCHHHHHHHHHHHHcCCH
Q 003025 492 IRVNPWNIEATAEAMHEAIQMNE 514 (856)
Q Consensus 492 l~VnP~d~~~~A~ai~~aL~m~~ 514 (856)
.+|++.|+++++++|.++|+.+.
T Consensus 391 ~l~~~~~~~~m~~~i~~lL~d~~ 413 (438)
T TIGR02919 391 NIFEHNEVDQLISKLKDLLNDPN 413 (438)
T ss_pred ceecCCCHHHHHHHHHHHhcCHH
Confidence 99999999999999999998663
|
Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus. |
| >PLN02575 haloacid dehalogenase-like hydrolase | Back alignment and domain information |
|---|
Probab=97.90 E-value=5e-05 Score=84.99 Aligned_cols=89 Identities=10% Similarity=0.047 Sum_probs=64.8
Q ss_pred CCCeEEEEcCeEEEEEeCCCCHHHHHHHHHHHhhhcCCCcceEEEEeCCchhHHHHHHccccccCCCCCCCccEEEEEeC
Q 003025 737 NEPAAVKSGQFIVEVKPQGVSKGVVAEKIFTTMAESGRHADFVLCIGDDRSDEDMFEIIGNATSSGVLSSNASVFACTVG 816 (856)
Q Consensus 737 ~~~~~v~~g~~~vEI~p~gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG 816 (856)
++...++.+.....-+| +.......++.+ |+.++++++|||+.+|+.+-+.+|.. +++|+.+
T Consensus 257 ~yFd~Iv~sddv~~~KP----~Peifl~A~~~l---gl~Peecl~IGDS~~DIeAAk~AGm~-----------~IgV~~~ 318 (381)
T PLN02575 257 GFFSVIVAAEDVYRGKP----DPEMFIYAAQLL---NFIPERCIVFGNSNQTVEAAHDARMK-----------CVAVASK 318 (381)
T ss_pred HHceEEEecCcCCCCCC----CHHHHHHHHHHc---CCCcccEEEEcCCHHHHHHHHHcCCE-----------EEEECCC
Confidence 33445555544333344 678889999999 99999999999999999999999973 3455443
Q ss_pred CC---ccccceEcCChhHH-HHHHHHHHHhc
Q 003025 817 QK---PSKAKYYLDDAAEV-VTMLEALAEAS 843 (856)
Q Consensus 817 ~~---~s~A~y~l~~~~eV-~~~L~~L~~~~ 843 (856)
.. ...|++++++..++ ...|+.|+..-
T Consensus 319 ~~~~~l~~Ad~iI~s~~EL~~~~l~~l~~~~ 349 (381)
T PLN02575 319 HPIYELGAADLVVRRLDELSIVDLKNLADIE 349 (381)
T ss_pred CChhHhcCCCEEECCHHHHHHHHHhhhhhcC
Confidence 21 23588899999997 66777777654
|
|
| >PLN03243 haloacid dehalogenase-like hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=97.89 E-value=0.00012 Score=78.51 Aligned_cols=80 Identities=11% Similarity=0.060 Sum_probs=57.5
Q ss_pred CCCeEEEEcCeEEEEEeCCCCHHHHHHHHHHHhhhcCCCcceEEEEeCCchhHHHHHHccccccCCCCCCCccEEEEEeC
Q 003025 737 NEPAAVKSGQFIVEVKPQGVSKGVVAEKIFTTMAESGRHADFVLCIGDDRSDEDMFEIIGNATSSGVLSSNASVFACTVG 816 (856)
Q Consensus 737 ~~~~~v~~g~~~vEI~p~gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG 816 (856)
.+...++.+...-.-+| +......+++++ |++++++++|||+.+|+.+-+.+|.. +++|+ |
T Consensus 150 ~~Fd~ii~~~d~~~~KP----~Pe~~~~a~~~l---~~~p~~~l~IgDs~~Di~aA~~aG~~-----------~i~v~-g 210 (260)
T PLN03243 150 GFFSVVLAAEDVYRGKP----DPEMFMYAAERL---GFIPERCIVFGNSNSSVEAAHDGCMK-----------CVAVA-G 210 (260)
T ss_pred hhCcEEEecccCCCCCC----CHHHHHHHHHHh---CCChHHeEEEcCCHHHHHHHHHcCCE-----------EEEEe-c
Confidence 33344555543333345 577888999999 99999999999999999999999973 34554 4
Q ss_pred CC----ccccceEcCChhHHHHH
Q 003025 817 QK----PSKAKYYLDDAAEVVTM 835 (856)
Q Consensus 817 ~~----~s~A~y~l~~~~eV~~~ 835 (856)
.. ...|.+++++..++...
T Consensus 211 ~~~~~~l~~ad~vi~~~~el~~~ 233 (260)
T PLN03243 211 KHPVYELSAGDLVVRRLDDLSVV 233 (260)
T ss_pred CCchhhhccCCEEeCCHHHHHHH
Confidence 32 24678889998875544
|
|
| >PRK11587 putative phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.89 E-value=3.4e-05 Score=80.50 Aligned_cols=61 Identities=10% Similarity=-0.033 Sum_probs=46.8
Q ss_pred HHHHHHHHHHHhhhcCCCcceEEEEeCCchhHHHHHHccccccCCCCCCCccEEEEEeCCC---ccccceEcCChhHH
Q 003025 758 KGVVAEKIFTTMAESGRHADFVLCIGDDRSDEDMFEIIGNATSSGVLSSNASVFACTVGQK---PSKAKYYLDDAAEV 832 (856)
Q Consensus 758 KG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~---~s~A~y~l~~~~eV 832 (856)
+.......++++ |++++++++|||+.+|+..-+.+|.. +++|+.|.. ...|.+++++..++
T Consensus 140 ~p~~~~~~~~~~---g~~p~~~l~igDs~~di~aA~~aG~~-----------~i~v~~~~~~~~~~~~~~~~~~~~el 203 (218)
T PRK11587 140 EPDAYLLGAQLL---GLAPQECVVVEDAPAGVLSGLAAGCH-----------VIAVNAPADTPRLDEVDLVLHSLEQL 203 (218)
T ss_pred CcHHHHHHHHHc---CCCcccEEEEecchhhhHHHHHCCCE-----------EEEECCCCchhhhccCCEEecchhhe
Confidence 567788888888 99999999999999999999999863 344544432 24577777777654
|
|
| >TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein | Back alignment and domain information |
|---|
Probab=97.88 E-value=3.3e-05 Score=79.76 Aligned_cols=66 Identities=12% Similarity=0.231 Sum_probs=55.8
Q ss_pred HHHHHHHHHHHhhhcCCCcceEEEEeCCchhHHHHHHccccccCCCCCCCccEEEEEeCCC------ccccceEcCChhH
Q 003025 758 KGVVAEKIFTTMAESGRHADFVLCIGDDRSDEDMFEIIGNATSSGVLSSNASVFACTVGQK------PSKAKYYLDDAAE 831 (856)
Q Consensus 758 KG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~------~s~A~y~l~~~~e 831 (856)
|...++.+++++ |++++++++|||+.+|+.+-+.+|.. +++|+.|.. ...|+|.++++.+
T Consensus 133 ~~~~~~~~~~~~---~~~~~~~l~igD~~~Di~aA~~~Gi~-----------~i~~~~g~~~~~~l~~~~~~~~~~~~~~ 198 (205)
T TIGR01454 133 APDIVREALRLL---DVPPEDAVMVGDAVTDLASARAAGTA-----------TVAALWGEGDAGELLAARPDFLLRKPQS 198 (205)
T ss_pred ChHHHHHHHHHc---CCChhheEEEcCCHHHHHHHHHcCCe-----------EEEEEecCCChhhhhhcCCCeeeCCHHH
Confidence 678889999998 99999999999999999999999973 467888852 3568899999999
Q ss_pred HHHHHH
Q 003025 832 VVTMLE 837 (856)
Q Consensus 832 V~~~L~ 837 (856)
+..+++
T Consensus 199 l~~~~~ 204 (205)
T TIGR01454 199 LLALCR 204 (205)
T ss_pred HHHHhh
Confidence 887654
|
The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity. |
| >PLN02779 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=97.86 E-value=3e-05 Score=84.53 Aligned_cols=61 Identities=13% Similarity=0.073 Sum_probs=49.0
Q ss_pred HHHHHHHHHHHhhhcCCCcceEEEEeCCchhHHHHHHccccccCCCCCCCccEEEEEeCCCc----cccceEcCChhHH
Q 003025 758 KGVVAEKIFTTMAESGRHADFVLCIGDDRSDEDMFEIIGNATSSGVLSSNASVFACTVGQKP----SKAKYYLDDAAEV 832 (856)
Q Consensus 758 KG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~~----s~A~y~l~~~~eV 832 (856)
+...+..+++++ |++++++++|||+.+|+.+-+.+|.. +++|..|... ..|++++++..++
T Consensus 204 ~p~~~~~a~~~~---~~~p~~~l~IGDs~~Di~aA~~aG~~-----------~i~v~~g~~~~~~l~~ad~vi~~~~~l 268 (286)
T PLN02779 204 DPDIYNLAAETL---GVDPSRCVVVEDSVIGLQAAKAAGMR-----------CIVTKSSYTADEDFSGADAVFDCLGDV 268 (286)
T ss_pred CHHHHHHHHHHh---CcChHHEEEEeCCHHhHHHHHHcCCE-----------EEEEccCCccccccCCCcEEECChhhc
Confidence 566889999999 99999999999999999999999973 4566666421 3588888887664
|
|
| >PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=97.84 E-value=0.00026 Score=73.94 Aligned_cols=66 Identities=24% Similarity=0.282 Sum_probs=47.4
Q ss_pred CCCHHHHHHHHHHHhhhcCCCcceEEEEeCCchhHHHHHHccccccCCCCCCCccEEEEEeCC------CccccceEcCC
Q 003025 755 GVSKGVVAEKIFTTMAESGRHADFVLCIGDDRSDEDMFEIIGNATSSGVLSSNASVFACTVGQ------KPSKAKYYLDD 828 (856)
Q Consensus 755 gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~------~~s~A~y~l~~ 828 (856)
+..|..+++. + +..++++++|||+.||++|.+.+|.. ++ -+. ....+.+..++
T Consensus 146 ~~~K~~~l~~----~---~~~~~~~i~iGDs~~Di~aa~~Ag~~------------~a--~~~l~~~~~~~~~~~~~~~~ 204 (219)
T PRK09552 146 GCCKPSLIRK----L---SDTNDFHIVIGDSITDLEAAKQADKV------------FA--RDFLITKCEELGIPYTPFET 204 (219)
T ss_pred CCchHHHHHH----h---ccCCCCEEEEeCCHHHHHHHHHCCcc------------ee--HHHHHHHHHHcCCCccccCC
Confidence 3457776654 3 66778999999999999999999863 22 221 13345556789
Q ss_pred hhHHHHHHHHHHH
Q 003025 829 AAEVVTMLEALAE 841 (856)
Q Consensus 829 ~~eV~~~L~~L~~ 841 (856)
..+|.+.|+.+..
T Consensus 205 f~ei~~~l~~~~~ 217 (219)
T PRK09552 205 FHDVQTELKHLLE 217 (219)
T ss_pred HHHHHHHHHHHhc
Confidence 9999999988754
|
|
| >TIGR01684 viral_ppase viral phosphatase | Back alignment and domain information |
|---|
Probab=97.81 E-value=3.9e-05 Score=81.90 Aligned_cols=56 Identities=14% Similarity=0.210 Sum_probs=48.5
Q ss_pred CcEEEEEecCCCCCCCCCCCCCC---CHHHHHHHHHHHhhCCCeEEEecCCChhhHHHhhcCC
Q 003025 590 KSRAILFDYDGTVMPQTSINKAP---SQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSPC 649 (856)
Q Consensus 590 ~~rlI~~DlDGTLl~~~~~~~~~---s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~~ 649 (856)
..++|+|||||||++ ..+.+ ++.+.++|++| ++.|+.++|+|++++..+...+..+
T Consensus 125 ~~kvIvFDLDgTLi~---~~~~v~irdPgV~EaL~~L-kekGikLaIaTS~~Re~v~~~L~~l 183 (301)
T TIGR01684 125 PPHVVVFDLDSTLIT---DEEPVRIRDPRIYDSLTEL-KKRGCILVLWSYGDRDHVVESMRKV 183 (301)
T ss_pred cceEEEEecCCCCcC---CCCccccCCHHHHHHHHHH-HHCCCEEEEEECCCHHHHHHHHHHc
Confidence 468999999999999 55554 69999999998 8889999999999999888877543
|
These proteins also include an N-terminal domain (ca. 125 aas) that is unique to this clade. |
| >TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253 | Back alignment and domain information |
|---|
Probab=97.78 E-value=5.4e-05 Score=78.90 Aligned_cols=38 Identities=13% Similarity=0.161 Sum_probs=34.4
Q ss_pred HHHHHHHHHHHhhhcCCCcceEEEEeCCc-hhHHHHHHcccc
Q 003025 758 KGVVAEKIFTTMAESGRHADFVLCIGDDR-SDEDMFEIIGNA 798 (856)
Q Consensus 758 KG~al~~Ll~~l~~~gi~~d~vlaiGD~~-ND~~Mf~~ag~~ 798 (856)
+....+.+++++ |++++++++|||+. +|+.+-+.+|..
T Consensus 152 ~~~~~~~~~~~~---~~~~~~~~~igDs~~~di~~A~~aG~~ 190 (221)
T TIGR02253 152 HPKIFYAALKRL---GVKPEEAVMVGDRLDKDIKGAKNLGMK 190 (221)
T ss_pred CHHHHHHHHHHc---CCChhhEEEECCChHHHHHHHHHCCCE
Confidence 567889999999 99999999999997 999999999973
|
This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). |
| >TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC | Back alignment and domain information |
|---|
Probab=97.69 E-value=0.00017 Score=68.71 Aligned_cols=54 Identities=15% Similarity=0.216 Sum_probs=41.4
Q ss_pred EEEEEecCCCCCCCCC--CCC-------CCCHHHHHHHHHHHhhCCCeEEEecCC-ChhhHHHhh
Q 003025 592 RAILFDYDGTVMPQTS--INK-------APSQAVISIINTLCNDARNTVFVVSGR-GRDCLGKWF 646 (856)
Q Consensus 592 rlI~~DlDGTLl~~~~--~~~-------~~s~~~~~aL~~L~~d~g~~V~I~TGR-~~~~l~~~~ 646 (856)
|+|++|+||||++... ... .+-+.+.+.|+.| ++.|+.++|+|++ ........+
T Consensus 1 kli~~DlD~Tl~~~~~~~~~~~~~~~~~~~~~gv~e~L~~L-k~~g~~l~i~Sn~~~~~~~~~~l 64 (128)
T TIGR01681 1 KVIVFDLDNTLWTGENIVVGEDPIIDLEVTIKEIRDKLQTL-KKNGFLLALASYNDDPHVAYELL 64 (128)
T ss_pred CEEEEeCCCCCCCCCcccccCCcchhhHHHHHHHHHHHHHH-HHCCeEEEEEeCCCCHHHHHHHH
Confidence 6899999999998421 111 2467999999997 7789999999999 666555555
|
No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC. |
| >TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase | Back alignment and domain information |
|---|
Probab=97.55 E-value=0.00024 Score=71.60 Aligned_cols=63 Identities=13% Similarity=0.061 Sum_probs=49.5
Q ss_pred HHHHHHHHHHHhhhcCCCcceEEEEeCCchhHHHHHHccccccCCCCCCCccEEEEEeCCC-----ccccceEcCChhHH
Q 003025 758 KGVVAEKIFTTMAESGRHADFVLCIGDDRSDEDMFEIIGNATSSGVLSSNASVFACTVGQK-----PSKAKYYLDDAAEV 832 (856)
Q Consensus 758 KG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~-----~s~A~y~l~~~~eV 832 (856)
+...+..+++++ |++++++++|||+.+|+..-+.+|.. .+..|..|.. ...|++++++..++
T Consensus 108 ~p~~~~~a~~~~---~~~~~~~v~VGDs~~Di~aA~~aG~~----------~~i~v~~g~~~~~~~~~~ad~~i~~~~el 174 (176)
T TIGR00213 108 KPGMLLQARKEL---HIDMAQSYMVGDKLEDMQAGVAAKVK----------TNVLVRTGKPITPEAENIADWVLNSLADL 174 (176)
T ss_pred CHHHHHHHHHHc---CcChhhEEEEcCCHHHHHHHHHCCCc----------EEEEEecCCcccccccccCCEEeccHHHh
Confidence 566778888888 99999999999999999999999973 1145666753 13488888888776
Q ss_pred H
Q 003025 833 V 833 (856)
Q Consensus 833 ~ 833 (856)
.
T Consensus 175 ~ 175 (176)
T TIGR00213 175 P 175 (176)
T ss_pred h
Confidence 4
|
This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812). |
| >PRK06698 bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase; Validated | Back alignment and domain information |
|---|
Probab=97.52 E-value=0.00027 Score=82.29 Aligned_cols=66 Identities=20% Similarity=0.263 Sum_probs=50.5
Q ss_pred HHHHHHHHHHHhhhcCCCcceEEEEeCCchhHHHHHHccccccCCCCCCCccEEEEEeCCC----ccccceEcCChhHHH
Q 003025 758 KGVVAEKIFTTMAESGRHADFVLCIGDDRSDEDMFEIIGNATSSGVLSSNASVFACTVGQK----PSKAKYYLDDAAEVV 833 (856)
Q Consensus 758 KG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~----~s~A~y~l~~~~eV~ 833 (856)
|...+..+++++ +++++++|||+.+|+.+.+.+|.. ++.|..|.. ...+.|++++..++.
T Consensus 387 kP~~~~~al~~l-----~~~~~v~VGDs~~Di~aAk~AG~~-----------~I~v~~~~~~~~~~~~~d~~i~~l~el~ 450 (459)
T PRK06698 387 KSDLVKSILNKY-----DIKEAAVVGDRLSDINAAKDNGLI-----------AIGCNFDFAQEDELAQADIVIDDLLELK 450 (459)
T ss_pred CcHHHHHHHHhc-----CcceEEEEeCCHHHHHHHHHCCCe-----------EEEEeCCCCcccccCCCCEEeCCHHHHH
Confidence 666777777765 468999999999999999999973 355655532 245889999999988
Q ss_pred HHHHHH
Q 003025 834 TMLEAL 839 (856)
Q Consensus 834 ~~L~~L 839 (856)
++|...
T Consensus 451 ~~l~~~ 456 (459)
T PRK06698 451 GILSTV 456 (459)
T ss_pred HHHHHH
Confidence 877553
|
|
| >PRK09449 dUMP phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.48 E-value=0.0001 Score=77.14 Aligned_cols=66 Identities=18% Similarity=0.115 Sum_probs=48.9
Q ss_pred HHHHHHHHHHHhhhcCCC-cceEEEEeCCc-hhHHHHHHccccccCCCCCCCccEEEEEeCC-C---ccccceEcCChhH
Q 003025 758 KGVVAEKIFTTMAESGRH-ADFVLCIGDDR-SDEDMFEIIGNATSSGVLSSNASVFACTVGQ-K---PSKAKYYLDDAAE 831 (856)
Q Consensus 758 KG~al~~Ll~~l~~~gi~-~d~vlaiGD~~-ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~-~---~s~A~y~l~~~~e 831 (856)
+....+.+++++ |.. ++++++|||+. +|+..-+.+|.. ++.+..+. . ...+.|.+++..+
T Consensus 152 ~p~~~~~~~~~~---~~~~~~~~~~vgD~~~~Di~~A~~aG~~-----------~i~~~~~~~~~~~~~~~~~~i~~~~e 217 (224)
T PRK09449 152 DVAIFDYALEQM---GNPDRSRVLMVGDNLHSDILGGINAGID-----------TCWLNAHGREQPEGIAPTYQVSSLSE 217 (224)
T ss_pred CHHHHHHHHHHc---CCCCcccEEEEcCCcHHHHHHHHHCCCc-----------EEEECCCCCCCCCCCCCeEEECCHHH
Confidence 567788899988 864 58999999997 799999999973 12333222 1 1247788899998
Q ss_pred HHHHHH
Q 003025 832 VVTMLE 837 (856)
Q Consensus 832 V~~~L~ 837 (856)
+.++|.
T Consensus 218 l~~~l~ 223 (224)
T PRK09449 218 LEQLLC 223 (224)
T ss_pred HHHHHh
Confidence 888764
|
|
| >PLN02940 riboflavin kinase | Back alignment and domain information |
|---|
Probab=97.48 E-value=0.00054 Score=77.71 Aligned_cols=61 Identities=15% Similarity=0.030 Sum_probs=48.5
Q ss_pred HHHHHHHHHHHhhhcCCCcceEEEEeCCchhHHHHHHccccccCCCCCCCccEEEEEeCCC----ccccceEcCChhHH
Q 003025 758 KGVVAEKIFTTMAESGRHADFVLCIGDDRSDEDMFEIIGNATSSGVLSSNASVFACTVGQK----PSKAKYYLDDAAEV 832 (856)
Q Consensus 758 KG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~----~s~A~y~l~~~~eV 832 (856)
+......+++.+ |++++++++|||+.+|+..-+.+|.. ++.|+.|.. ...|.+.+++..++
T Consensus 152 ~p~~~~~a~~~l---gv~p~~~l~VGDs~~Di~aA~~aGi~-----------~I~v~~g~~~~~~~~~ad~~i~sl~el 216 (382)
T PLN02940 152 SPDIFLEAAKRL---NVEPSNCLVIEDSLPGVMAGKAAGME-----------VIAVPSIPKQTHLYSSADEVINSLLDL 216 (382)
T ss_pred CHHHHHHHHHHc---CCChhHEEEEeCCHHHHHHHHHcCCE-----------EEEECCCCcchhhccCccEEeCCHhHc
Confidence 678899999999 99999999999999999999999973 355555532 24567777777664
|
|
| >PRK14988 GMP/IMP nucleotidase; Provisional | Back alignment and domain information |
|---|
Probab=97.47 E-value=0.0005 Score=72.15 Aligned_cols=69 Identities=14% Similarity=0.092 Sum_probs=52.1
Q ss_pred HHHHHHHHHHHhhhcCCCcceEEEEeCCchhHHHHHHccccccCCCCCCCccEEEEEeCCC--ccccceEcCChhHHHHH
Q 003025 758 KGVVAEKIFTTMAESGRHADFVLCIGDDRSDEDMFEIIGNATSSGVLSSNASVFACTVGQK--PSKAKYYLDDAAEVVTM 835 (856)
Q Consensus 758 KG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~--~s~A~y~l~~~~eV~~~ 835 (856)
+....+.+++++ |++++++++|||+.+|+..-+.+|.. .+++|+.+.. ...+...+.+.+++.++
T Consensus 151 ~p~~~~~~~~~~---~~~p~~~l~igDs~~di~aA~~aG~~----------~~~~v~~~~~~~~~~~~~~~~~~~~~~~~ 217 (224)
T PRK14988 151 DQRLWQAVAEHT---GLKAERTLFIDDSEPILDAAAQFGIR----------YCLGVTNPDSGIAEKQYQRHPSLNDYRRL 217 (224)
T ss_pred CHHHHHHHHHHc---CCChHHEEEEcCCHHHHHHHHHcCCe----------EEEEEeCCCCCccchhccCCCcHHHHHHH
Confidence 577889999999 99999999999999999999999873 1244555543 23444555677777777
Q ss_pred HHHH
Q 003025 836 LEAL 839 (856)
Q Consensus 836 L~~L 839 (856)
|+.|
T Consensus 218 ~~~l 221 (224)
T PRK14988 218 IPSL 221 (224)
T ss_pred hhhh
Confidence 7765
|
|
| >TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain | Back alignment and domain information |
|---|
Probab=97.47 E-value=0.00048 Score=67.29 Aligned_cols=38 Identities=24% Similarity=0.209 Sum_probs=34.4
Q ss_pred HHHHHHHHHHHhhhcCCCcceEEEEeCCchhHHHHHHcccc
Q 003025 758 KGVVAEKIFTTMAESGRHADFVLCIGDDRSDEDMFEIIGNA 798 (856)
Q Consensus 758 KG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~ 798 (856)
|...++.+++.+ +++++++++|||+..|+.+-+.+|..
T Consensus 103 ~~~~~~~~~~~~---~~~~~e~i~IGDs~~Di~~A~~~Gi~ 140 (147)
T TIGR01656 103 KPGLILEALKRL---GVDASRSLVVGDRLRDLQAARNAGLA 140 (147)
T ss_pred CHHHHHHHHHHc---CCChHHEEEEcCCHHHHHHHHHCCCC
Confidence 677788888988 99999999999999999999999873
|
This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3. |
| >PHA02597 30 | Back alignment and domain information |
|---|
Probab=97.45 E-value=0.00051 Score=70.34 Aligned_cols=60 Identities=15% Similarity=0.066 Sum_probs=46.7
Q ss_pred HHHHHHHHHHHhhhcCCCcceEEEEeCCchhHHHHHHc--cccccCCCCCCCccEEEEEeCCCc--cccceEcCChhHHH
Q 003025 758 KGVVAEKIFTTMAESGRHADFVLCIGDDRSDEDMFEII--GNATSSGVLSSNASVFACTVGQKP--SKAKYYLDDAAEVV 833 (856)
Q Consensus 758 KG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~a--g~~~~~~~~~~~~~~~av~vG~~~--s~A~y~l~~~~eV~ 833 (856)
|...+..+++++ | ++.+++|||+.+|+..-+.+ |.. ++.|..|+.+ -.+.|.+++..++.
T Consensus 132 kp~~~~~a~~~~---~--~~~~v~vgDs~~di~aA~~a~~Gi~-----------~i~~~~~~~~~~~~~~~~~~~~~~~~ 195 (197)
T PHA02597 132 KEKLFIKAKEKY---G--DRVVCFVDDLAHNLDAAHEALSQLP-----------VIHMLRGERDHIPKLAHRVKSWNDIE 195 (197)
T ss_pred cHHHHHHHHHHh---C--CCcEEEeCCCHHHHHHHHHHHcCCc-----------EEEecchhhccccchhhhhccHHHHh
Confidence 678889999988 7 78899999999999999998 873 4677777642 25557777766654
|
2 hypothetical protein; Provisional |
| >PHA03398 viral phosphatase superfamily protein; Provisional | Back alignment and domain information |
|---|
Probab=97.40 E-value=0.00031 Score=75.22 Aligned_cols=56 Identities=16% Similarity=0.213 Sum_probs=48.3
Q ss_pred CcEEEEEecCCCCCCCCCCCCCC---CHHHHHHHHHHHhhCCCeEEEecCCChhhHHHhhcCC
Q 003025 590 KSRAILFDYDGTVMPQTSINKAP---SQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSPC 649 (856)
Q Consensus 590 ~~rlI~~DlDGTLl~~~~~~~~~---s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~~ 649 (856)
..++|+||+||||++ ..+.+ ++.+.++|++| ++.|+.++|+|+.+...+...+..+
T Consensus 127 ~~~~i~~D~D~TL~~---~~~~v~irdp~V~EtL~eL-kekGikLaIvTNg~Re~v~~~Le~l 185 (303)
T PHA03398 127 IPHVIVFDLDSTLIT---DEEPVRIRDPFVYDSLDEL-KERGCVLVLWSYGNREHVVHSLKET 185 (303)
T ss_pred eccEEEEecCCCccC---CCCccccCChhHHHHHHHH-HHCCCEEEEEcCCChHHHHHHHHHc
Confidence 368999999999999 66666 79999999998 8889999999988888887777543
|
|
| >TIGR01261 hisB_Nterm histidinol-phosphatase | Back alignment and domain information |
|---|
Probab=97.33 E-value=0.0012 Score=65.52 Aligned_cols=38 Identities=21% Similarity=0.146 Sum_probs=34.7
Q ss_pred HHHHHHHHHHHhhhcCCCcceEEEEeCCchhHHHHHHcccc
Q 003025 758 KGVVAEKIFTTMAESGRHADFVLCIGDDRSDEDMFEIIGNA 798 (856)
Q Consensus 758 KG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~ 798 (856)
|...++.+++++ +++++++++|||+.+|+++.+.+|..
T Consensus 105 ~~~~~~~~~~~~---~~~~~e~l~IGD~~~Di~~A~~aGi~ 142 (161)
T TIGR01261 105 KIKLLEPYLKKN---LIDKARSYVIGDRETDMQLAENLGIR 142 (161)
T ss_pred CHHHHHHHHHHc---CCCHHHeEEEeCCHHHHHHHHHCCCe
Confidence 778888888888 99999999999999999999999973
|
This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis. |
| >PHA02530 pseT polynucleotide kinase; Provisional | Back alignment and domain information |
|---|
Probab=97.31 E-value=0.0028 Score=69.42 Aligned_cols=55 Identities=27% Similarity=0.486 Sum_probs=45.7
Q ss_pred cEEEEEecCCCCCCCCCC---------CCCCCHHHHHHHHHHHhhCCCeEEEecCCChhhHHHhh
Q 003025 591 SRAILFDYDGTVMPQTSI---------NKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWF 646 (856)
Q Consensus 591 ~rlI~~DlDGTLl~~~~~---------~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~ 646 (856)
.+++++|+||||...... +..+.+.+.++|++| ++.|..++++|||+.......+
T Consensus 158 ~~~~~~D~dgtl~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l-~~~g~~i~i~T~r~~~~~~~~l 221 (300)
T PHA02530 158 PKAVIFDIDGTLAKMGGRSPYDWTKVKEDKPNPMVVELVKMY-KAAGYEIIVVSGRDGVCEEDTV 221 (300)
T ss_pred CCEEEEECCCcCcCCCCCCccchhhcccCCCChhHHHHHHHH-HhCCCEEEEEeCCChhhHHHHH
Confidence 579999999999973311 346789999999998 7789999999999998877666
|
|
| >TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668 | Back alignment and domain information |
|---|
Probab=97.26 E-value=0.0021 Score=64.47 Aligned_cols=48 Identities=19% Similarity=0.286 Sum_probs=40.3
Q ss_pred cCCcEEEEEecCCCCCCCCCCCCCCCHHHHHHHHHHHhhCCCeEEEecCCC
Q 003025 588 RSKSRAILFDYDGTVMPQTSINKAPSQAVISIINTLCNDARNTVFVVSGRG 638 (856)
Q Consensus 588 ~s~~rlI~~DlDGTLl~~~~~~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~ 638 (856)
+...+++++|+||||+.. ....+.+.+.++|++| ++.|..++|+|+.+
T Consensus 22 ~~~v~~vv~D~Dgtl~~~--~~~~~~pgv~e~L~~L-k~~g~~l~I~Sn~~ 69 (170)
T TIGR01668 22 KVGIKGVVLDKDNTLVYP--DHNEAYPALRDWIEEL-KAAGRKLLIVSNNA 69 (170)
T ss_pred HCCCCEEEEecCCccccC--CCCCcChhHHHHHHHH-HHcCCEEEEEeCCc
Confidence 357899999999999973 1236778999999997 78899999999987
|
This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family. |
| >TIGR01990 bPGM beta-phosphoglucomutase | Back alignment and domain information |
|---|
Probab=97.18 E-value=0.0019 Score=65.16 Aligned_cols=37 Identities=11% Similarity=0.091 Sum_probs=34.5
Q ss_pred HHHHHHHHHHHhhhcCCCcceEEEEeCCchhHHHHHHccc
Q 003025 758 KGVVAEKIFTTMAESGRHADFVLCIGDDRSDEDMFEIIGN 797 (856)
Q Consensus 758 KG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~ 797 (856)
+....+.+++++ +++++++++|||+.+|+.+-+.+|.
T Consensus 143 ~p~~~~~~~~~~---~~~~~~~v~vgD~~~di~aA~~aG~ 179 (185)
T TIGR01990 143 DPEIFLAAAEGL---GVSPSECIGIEDAQAGIEAIKAAGM 179 (185)
T ss_pred ChHHHHHHHHHc---CCCHHHeEEEecCHHHHHHHHHcCC
Confidence 678888999998 9999999999999999999999997
|
The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state. |
| >TIGR01664 DNA-3'-Pase DNA 3'-phosphatase | Back alignment and domain information |
|---|
Probab=97.13 E-value=0.003 Score=63.07 Aligned_cols=48 Identities=19% Similarity=0.321 Sum_probs=36.1
Q ss_pred CcEEEEEecCCCCCCCCCCCCC---------CCHHHHHHHHHHHhhCCCeEEEecCCC
Q 003025 590 KSRAILFDYDGTVMPQTSINKA---------PSQAVISIINTLCNDARNTVFVVSGRG 638 (856)
Q Consensus 590 ~~rlI~~DlDGTLl~~~~~~~~---------~s~~~~~aL~~L~~d~g~~V~I~TGR~ 638 (856)
+.|++++|+||||+...+.... +-+.+.++|++| ++.|+.++|+|..+
T Consensus 12 ~~k~~~~D~Dgtl~~~~~~~~~~~~~~~~~~~~pgv~e~L~~L-k~~G~~l~I~TN~~ 68 (166)
T TIGR01664 12 QSKVAAFDLDGTLITTRSGKVFPTSASDWRFLYPEIPAKLQEL-DDEGYKIVIFTNQS 68 (166)
T ss_pred cCcEEEEeCCCceEecCCCCcccCChHHeEEecCCHHHHHHHH-HHCCCEEEEEeCCc
Confidence 3789999999999973211101 236788999998 78899999999854
|
The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region. |
| >TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase | Back alignment and domain information |
|---|
Probab=97.13 E-value=0.0098 Score=61.87 Aligned_cols=64 Identities=17% Similarity=0.159 Sum_probs=44.4
Q ss_pred CCHHHHHHHHHHHhhhcCCCcceEEEEeCCchhHHHHHHccccccCCCCCCCccEEEEEeCC------CccccceEcCCh
Q 003025 756 VSKGVVAEKIFTTMAESGRHADFVLCIGDDRSDEDMFEIIGNATSSGVLSSNASVFACTVGQ------KPSKAKYYLDDA 829 (856)
Q Consensus 756 vsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~------~~s~A~y~l~~~ 829 (856)
..|..+++.+. ..++.+++|||+.||++|++.++.. ++-+. ....+....++-
T Consensus 143 ~~K~~~l~~~~-------~~~~~~i~iGDg~~D~~~a~~Ad~~--------------~ar~~l~~~~~~~~~~~~~~~~f 201 (214)
T TIGR03333 143 CCKPSLIRKLS-------EPNDYHIVIGDSVTDVEAAKQSDLC--------------FARDYLLNECEELGLNHAPFQDF 201 (214)
T ss_pred CCHHHHHHHHh-------hcCCcEEEEeCCHHHHHHHHhCCee--------------EehHHHHHHHHHcCCCccCcCCH
Confidence 45888877653 3467899999999999999999853 22221 123333345788
Q ss_pred hHHHHHHHHHH
Q 003025 830 AEVVTMLEALA 840 (856)
Q Consensus 830 ~eV~~~L~~L~ 840 (856)
.+|.+.|++..
T Consensus 202 ~di~~~l~~~~ 212 (214)
T TIGR03333 202 YDVRKELENVK 212 (214)
T ss_pred HHHHHHHHHHh
Confidence 99999887654
|
Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX. |
| >COG0647 NagD Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.13 E-value=0.014 Score=62.58 Aligned_cols=47 Identities=19% Similarity=0.339 Sum_probs=39.5
Q ss_pred CcEEEEEecCCCCCCCCCCCCCCCHHHHHHHHHHHhhCCCeEEEecCCChhh
Q 003025 590 KSRAILFDYDGTVMPQTSINKAPSQAVISIINTLCNDARNTVFVVSGRGRDC 641 (856)
Q Consensus 590 ~~rlI~~DlDGTLl~~~~~~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~ 641 (856)
+.+.++||+||||.. ..++-+...++|++| +++|.+++++|-.+..+
T Consensus 7 ~y~~~l~DlDGvl~~----G~~~ipga~e~l~~L-~~~g~~~iflTNn~~~s 53 (269)
T COG0647 7 KYDGFLFDLDGVLYR----GNEAIPGAAEALKRL-KAAGKPVIFLTNNSTRS 53 (269)
T ss_pred hcCEEEEcCcCceEe----CCccCchHHHHHHHH-HHcCCeEEEEeCCCCCC
Confidence 357899999999997 566778999999998 88899999998766543
|
|
| >TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase | Back alignment and domain information |
|---|
Probab=97.12 E-value=0.002 Score=65.00 Aligned_cols=40 Identities=25% Similarity=0.301 Sum_probs=32.9
Q ss_pred EeCCCCHHHHHHHHHHHhhhcCCCcceEEEEeCCchhHHHHHHccc
Q 003025 752 KPQGVSKGVVAEKIFTTMAESGRHADFVLCIGDDRSDEDMFEIIGN 797 (856)
Q Consensus 752 ~p~gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~ 797 (856)
.+.|..|+..++.+.++. ++.+++|||+.||+++.+.++.
T Consensus 144 ~~~g~~K~~~~~~~~~~~------~~~~i~iGD~~~D~~aa~~~d~ 183 (188)
T TIGR01489 144 CPCGCCKGKVIHKLSEPK------YQHIIYIGDGVTDVCPAKLSDV 183 (188)
T ss_pred CCCCCCHHHHHHHHHhhc------CceEEEECCCcchhchHhcCCc
Confidence 356678988888887642 6889999999999999999865
|
Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact. |
| >TIGR01525 ATPase-IB_hvy heavy metal translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=97.07 E-value=0.0019 Score=77.16 Aligned_cols=64 Identities=11% Similarity=0.148 Sum_probs=51.1
Q ss_pred HHHHcCCcEEEEEecCCCCCCCCCCCCCCCHHHHHHHHHHHhhCC-CeEEEecCCChhhHHHhhcC
Q 003025 584 SAYLRSKSRAILFDYDGTVMPQTSINKAPSQAVISIINTLCNDAR-NTVFVVSGRGRDCLGKWFSP 648 (856)
Q Consensus 584 ~~y~~s~~rlI~~DlDGTLl~~~~~~~~~s~~~~~aL~~L~~d~g-~~V~I~TGR~~~~l~~~~~~ 648 (856)
..+.....+.+++..||+++..-.....+-+.+.++|++| ++.| ++++++||.+...+....+.
T Consensus 357 ~~~~~~g~~~~~v~~~~~~~g~i~~~d~~~~g~~e~l~~L-~~~g~i~v~ivTgd~~~~a~~i~~~ 421 (556)
T TIGR01525 357 NEGESQGKTVVFVAVDGELLGVIALRDQLRPEAKEAIAAL-KRAGGIKLVMLTGDNRSAAEAVAAE 421 (556)
T ss_pred HHHhhCCcEEEEEEECCEEEEEEEecccchHhHHHHHHHH-HHcCCCeEEEEeCCCHHHHHHHHHH
Confidence 3445566788999999988862223566889999999997 7789 99999999999998888843
|
This alignment encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512. |
| >PRK10671 copA copper exporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=97.01 E-value=0.0033 Score=78.75 Aligned_cols=64 Identities=13% Similarity=0.220 Sum_probs=48.4
Q ss_pred HHHHHcCCcEEEEEecCCCCCCCCCCCCCCCHHHHHHHHHHHhhCCCeEEEecCCChhhHHHhhc
Q 003025 583 VSAYLRSKSRAILFDYDGTVMPQTSINKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFS 647 (856)
Q Consensus 583 ~~~y~~s~~rlI~~DlDGTLl~~~~~~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~ 647 (856)
...+.....+.+++-.||+++..-.....+-+...++|++| ++.|++++++||.+....+....
T Consensus 622 ~~~~~~~g~~~v~va~~~~~~g~~~l~d~~r~~a~~~i~~L-~~~gi~v~~~Tgd~~~~a~~ia~ 685 (834)
T PRK10671 622 ITAQASQGATPVLLAVDGKAAALLAIRDPLRSDSVAALQRL-HKAGYRLVMLTGDNPTTANAIAK 685 (834)
T ss_pred HHHHHhCCCeEEEEEECCEEEEEEEccCcchhhHHHHHHHH-HHCCCeEEEEcCCCHHHHHHHHH
Confidence 34455566788888889987631113445667888999997 88899999999999998888774
|
|
| >PRK10725 fructose-1-P/6-phosphogluconate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.01 E-value=0.0009 Score=67.80 Aligned_cols=37 Identities=11% Similarity=-0.019 Sum_probs=34.6
Q ss_pred HHHHHHHHHHHhhhcCCCcceEEEEeCCchhHHHHHHccc
Q 003025 758 KGVVAEKIFTTMAESGRHADFVLCIGDDRSDEDMFEIIGN 797 (856)
Q Consensus 758 KG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~ 797 (856)
+...++.+++++ |.+++++++|||+.+|+..-+.+|.
T Consensus 144 ~p~~~~~~~~~~---~~~~~~~l~igDs~~di~aA~~aG~ 180 (188)
T PRK10725 144 APDTFLRCAQLM---GVQPTQCVVFEDADFGIQAARAAGM 180 (188)
T ss_pred ChHHHHHHHHHc---CCCHHHeEEEeccHhhHHHHHHCCC
Confidence 677899999999 9999999999999999999999997
|
|
| >TIGR01549 HAD-SF-IA-v1 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E | Back alignment and domain information |
|---|
Probab=96.93 E-value=0.0017 Score=63.59 Aligned_cols=35 Identities=20% Similarity=0.231 Sum_probs=31.6
Q ss_pred HHHHHHHHHHHhhhcCCCcceEEEEeCCchhHHHHHHcc
Q 003025 758 KGVVAEKIFTTMAESGRHADFVLCIGDDRSDEDMFEIIG 796 (856)
Q Consensus 758 KG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag 796 (856)
+...+..+++++ |+++ ++++|||+.+|+.+-+.+|
T Consensus 120 ~~~~~~~~~~~~---~~~~-~~l~iGDs~~Di~aa~~aG 154 (154)
T TIGR01549 120 EPEIFLAALESL---GLPP-EVLHVGDNLNDIEGARNAG 154 (154)
T ss_pred CHHHHHHHHHHc---CCCC-CEEEEeCCHHHHHHHHHcc
Confidence 678899999999 9988 9999999999999988765
|
HAD subfamilies caused by an overly broad single model. |
| >PRK11590 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=96.92 E-value=0.0026 Score=66.09 Aligned_cols=26 Identities=12% Similarity=0.193 Sum_probs=22.5
Q ss_pred CCCcceEEEEeCCchhHHHHHHcccc
Q 003025 773 GRHADFVLCIGDDRSDEDMFEIIGNA 798 (856)
Q Consensus 773 gi~~d~vlaiGD~~ND~~Mf~~ag~~ 798 (856)
+.+.+...+.|||.||.+||+.+++.
T Consensus 173 ~~~~~~~~aY~Ds~~D~pmL~~a~~~ 198 (211)
T PRK11590 173 GTPLRLYSGYSDSKQDNPLLYFCQHR 198 (211)
T ss_pred CCCcceEEEecCCcccHHHHHhCCCC
Confidence 45667789999999999999999973
|
|
| >TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase | Back alignment and domain information |
|---|
Probab=96.90 E-value=0.0013 Score=66.38 Aligned_cols=37 Identities=8% Similarity=-0.035 Sum_probs=33.4
Q ss_pred HHHHHHHHHHHhhhcCCCcceEEEEeCCchhHHHHHHccc
Q 003025 758 KGVVAEKIFTTMAESGRHADFVLCIGDDRSDEDMFEIIGN 797 (856)
Q Consensus 758 KG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~ 797 (856)
+....+.+++++ +++++++++|||+.+|+.+-+.+|.
T Consensus 144 ~~~~~~~~~~~~---~~~~~~~v~IgD~~~di~aA~~~G~ 180 (185)
T TIGR02009 144 HPETFLLAAELL---GVSPNECVVFEDALAGVQAARAAGM 180 (185)
T ss_pred ChHHHHHHHHHc---CCCHHHeEEEeCcHhhHHHHHHCCC
Confidence 456778888988 9999999999999999999999986
|
All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509). |
| >TIGR01686 FkbH FkbH-like domain | Back alignment and domain information |
|---|
Probab=96.86 E-value=0.0078 Score=66.75 Aligned_cols=114 Identities=18% Similarity=0.157 Sum_probs=81.1
Q ss_pred CcEEEEEecCCCCCCCCCCC--------CCCCHHHHHHHHHHHhhCCCeEEEecCCChhhHHHhhcCCCCccEEeeCCEE
Q 003025 590 KSRAILFDYDGTVMPQTSIN--------KAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSPCKKLGIAAEHGYF 661 (856)
Q Consensus 590 ~~rlI~~DlDGTLl~~~~~~--------~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~~~~lgliaenG~~ 661 (856)
.+|+|++|+|+||....-.+ ..+-+.+.+.|++| +++|+.++|||..+...+...+..-+.+ +
T Consensus 2 ~~k~~v~DlDnTlw~gv~~e~g~~~i~~~~~~~~~~e~L~~L-~~~Gi~lai~S~n~~~~a~~~l~~~~~~--------~ 72 (320)
T TIGR01686 2 ALKVLVLDLDNTLWGGVLGEDGIDNLNLSPLHKTLQEKIKTL-KKQGFLLALASKNDEDDAKKVFERRKDF--------I 72 (320)
T ss_pred CeEEEEEcCCCCCCCCEEccCCccccccCccHHHHHHHHHHH-HhCCCEEEEEcCCCHHHHHHHHHhCccc--------c
Confidence 47999999999999732001 12347899999998 7889999999999998888777321110 0
Q ss_pred EEeCCCcceEecCCCCcccHHHHHHHHHHHHhhcCCcceEEecccceEEeeecCCCCCCchhHHHHHHHHHHHhcCCCeE
Q 003025 662 MRWSADEEWQNCGQSVDFGWIQIAEPVMKLYTESTDGSYIEIKESALVWHHRDADPGFGSSQAKELLDHLESVLANEPAA 741 (856)
Q Consensus 662 I~~~~~~~w~~~~~~~~~~w~~~v~~i~~~~~~~~~Gs~ie~k~~~l~~~~~~~dp~~~~~~a~el~~~L~~~l~~~~~~ 741 (856)
.. + ++| ..
T Consensus 73 -------------~~----~--------~~f-----------------------------------------------~~ 80 (320)
T TIGR01686 73 -------------LQ----A--------EDF-----------------------------------------------DA 80 (320)
T ss_pred -------------Cc----H--------HHe-----------------------------------------------eE
Confidence 00 0 000 00
Q ss_pred EEEcCeEEEEEeCCCCHHHHHHHHHHHhhhcCCCcceEEEEeCCchhHHHHHHcc
Q 003025 742 VKSGQFIVEVKPQGVSKGVVAEKIFTTMAESGRHADFVLCIGDDRSDEDMFEIIG 796 (856)
Q Consensus 742 v~~g~~~vEI~p~gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag 796 (856)
+..+ ..| |...++.+++.+ |++++.+++|||+..|..+.+.+.
T Consensus 81 ~~~~-----~~p----k~~~i~~~~~~l---~i~~~~~vfidD~~~d~~~~~~~l 123 (320)
T TIGR01686 81 RSIN-----WGP----KSESLRKIAKKL---NLGTDSFLFIDDNPAERANVKITL 123 (320)
T ss_pred EEEe-----cCc----hHHHHHHHHHHh---CCCcCcEEEECCCHHHHHHHHHHC
Confidence 0011 123 999999999999 999999999999999999998865
|
The C-terminal portion of this domain is unique to this family (by BLAST). |
| >TIGR01460 HAD-SF-IIA Haloacid Dehalogenase Superfamily Class (subfamily) IIA | Back alignment and domain information |
|---|
Probab=96.86 E-value=0.02 Score=60.51 Aligned_cols=50 Identities=22% Similarity=0.323 Sum_probs=41.3
Q ss_pred EEEecCCCCCCCCCCCCCCCHHHHHHHHHHHhhCCCeEEEec---CCChhhHHHhhcC
Q 003025 594 ILFDYDGTVMPQTSINKAPSQAVISIINTLCNDARNTVFVVS---GRGRDCLGKWFSP 648 (856)
Q Consensus 594 I~~DlDGTLl~~~~~~~~~s~~~~~aL~~L~~d~g~~V~I~T---GR~~~~l~~~~~~ 648 (856)
++||+||||++ .... -+.+.++|+.| +..|.+++++| ||+...+.+.+..
T Consensus 1 ~lfD~DGvL~~---~~~~-~~~a~e~i~~l-~~~g~~~~~~tN~~~~~~~~~~~~l~~ 53 (236)
T TIGR01460 1 FLFDIDGVLWL---GHKP-IPGAAEALNRL-RAKGKPVVFLTNNSSRSEEDYAEKLSS 53 (236)
T ss_pred CEEeCcCccCc---CCcc-CcCHHHHHHHH-HHCCCeEEEEECCCCCCHHHHHHHHHH
Confidence 58999999998 4444 45889999997 78899999998 8999988777744
|
Many of the genes in this subfamily have been annotated as "pNPPase" "4-nitrophenyl phosphatase" or "NPPase". These all refer to the same activity versus a common lab test compound used to determine phosphatase activity. There is no evidence that this activity is physiologically relevant. |
| >TIGR01672 AphA HAD superfamily (subfamily IIIB) phosphatase, TIGR01672 | Back alignment and domain information |
|---|
Probab=96.85 E-value=0.0018 Score=68.39 Aligned_cols=64 Identities=23% Similarity=0.313 Sum_probs=47.7
Q ss_pred cccCCHHHHHHHHHcCCcEEEEEecCCCCCCCCC---CCCC-CCH---------------------------HHHHHHHH
Q 003025 574 FRKLSIDAIVSAYLRSKSRAILFDYDGTVMPQTS---INKA-PSQ---------------------------AVISIINT 622 (856)
Q Consensus 574 f~~l~~~~i~~~y~~s~~rlI~~DlDGTLl~~~~---~~~~-~s~---------------------------~~~~aL~~ 622 (856)
..-.++++|.+..+..+.-.|+||+||||++..+ .... +++ ...+.|+.
T Consensus 46 ~~~~~~~~~~~~~~~~~p~aViFDlDgTLlDSs~~~~~G~~~~s~~~~~~l~g~~~w~~~~~~~~~~s~p~~~a~elL~~ 125 (237)
T TIGR01672 46 IHWISVAQIENSLEGRPPIAVSFDIDDTVLFSSPGFWRGKKTFSPGSEDYLKNQVFWEKVNNGWDEFSIPKEVARQLIDM 125 (237)
T ss_pred eeEEEHHHHHHhcCCCCCeEEEEeCCCccccCcHHHhCCcccCCHHHhhhhcChHHHHHHHHhcccCCcchhHHHHHHHH
Confidence 4457889999998877777999999999998433 1001 122 26778888
Q ss_pred HHhhCCCeEEEecCCC
Q 003025 623 LCNDARNTVFVVSGRG 638 (856)
Q Consensus 623 L~~d~g~~V~I~TGR~ 638 (856)
| +++|.+++|+|+|.
T Consensus 126 l-~~~G~~i~iVTnr~ 140 (237)
T TIGR01672 126 H-QRRGDAIFFVTGRT 140 (237)
T ss_pred H-HHCCCEEEEEeCCC
Confidence 6 78899999999993
|
Supporting evidence for the inclusion in the HAD superfamily, whose phosphatase members are magnesium dependent, is the inhibition by EDTA and calcium ions, and stimulation by magnesium ion. |
| >PRK10563 6-phosphogluconate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=96.84 E-value=0.00076 Score=70.39 Aligned_cols=38 Identities=8% Similarity=0.028 Sum_probs=35.2
Q ss_pred HHHHHHHHHHHhhhcCCCcceEEEEeCCchhHHHHHHcccc
Q 003025 758 KGVVAEKIFTTMAESGRHADFVLCIGDDRSDEDMFEIIGNA 798 (856)
Q Consensus 758 KG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~ 798 (856)
+......+++++ |++++++++|||+.+|+..-+.+|..
T Consensus 144 ~p~~~~~a~~~~---~~~p~~~l~igDs~~di~aA~~aG~~ 181 (221)
T PRK10563 144 DPALMFHAAEAM---NVNVENCILVDDSSAGAQSGIAAGME 181 (221)
T ss_pred ChHHHHHHHHHc---CCCHHHeEEEeCcHhhHHHHHHCCCE
Confidence 678899999999 99999999999999999999999963
|
|
| >TIGR01512 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=96.84 E-value=0.0036 Score=74.40 Aligned_cols=59 Identities=15% Similarity=0.194 Sum_probs=46.0
Q ss_pred CCcEEEEEecCCCCCCCCCCCCCCCHHHHHHHHHHHhhCCC-eEEEecCCChhhHHHhhcC
Q 003025 589 SKSRAILFDYDGTVMPQTSINKAPSQAVISIINTLCNDARN-TVFVVSGRGRDCLGKWFSP 648 (856)
Q Consensus 589 s~~rlI~~DlDGTLl~~~~~~~~~s~~~~~aL~~L~~d~g~-~V~I~TGR~~~~l~~~~~~ 648 (856)
...+.++.-.||+++..-.....+-+.+.++|++| ++.|+ +++++||.+........+.
T Consensus 340 ~~~~~~~v~~~~~~~g~i~~~d~l~~~~~e~i~~L-~~~Gi~~v~vvTgd~~~~a~~i~~~ 399 (536)
T TIGR01512 340 AGKTIVHVARDGTYLGYILLSDEPRPDAAEAIAEL-KALGIEKVVMLTGDRRAVAERVARE 399 (536)
T ss_pred CCCeEEEEEECCEEEEEEEEeccchHHHHHHHHHH-HHcCCCcEEEEcCCCHHHHHHHHHH
Confidence 34566777778887752223456779999999998 88899 9999999999999888843
|
. |
| >TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459 | Back alignment and domain information |
|---|
Probab=96.83 E-value=0.026 Score=59.95 Aligned_cols=47 Identities=17% Similarity=0.290 Sum_probs=39.4
Q ss_pred CcEEEEEecCCCCCCCCCCCCCCCHHHHHHHHHHHhhCCCeEEEecCCChhh
Q 003025 590 KSRAILFDYDGTVMPQTSINKAPSQAVISIINTLCNDARNTVFVVSGRGRDC 641 (856)
Q Consensus 590 ~~rlI~~DlDGTLl~~~~~~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~ 641 (856)
++++++||+||||.. ...+-+.+.++|++| ++.|.+++|+|..++..
T Consensus 7 ~~~~~~~D~dG~l~~----~~~~~pga~e~L~~L-~~~G~~~~ivTN~~~~~ 53 (242)
T TIGR01459 7 DYDVFLLDLWGVIID----GNHTYPGAVQNLNKI-IAQGKPVYFVSNSPRNI 53 (242)
T ss_pred cCCEEEEeccccccc----CCccCccHHHHHHHH-HHCCCEEEEEeCCCCCh
Confidence 468999999999997 345679999999998 77899999998876654
|
This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily) |
| >PF06888 Put_Phosphatase: Putative Phosphatase; InterPro: IPR016965 This group represents phosphatases related to PHOSPHO1 and PHOSPHO2 [] | Back alignment and domain information |
|---|
Probab=96.81 E-value=0.029 Score=59.02 Aligned_cols=46 Identities=28% Similarity=0.354 Sum_probs=37.8
Q ss_pred EeCCCCHHHHHHHHHHHhhhcCCCcceEEEEeCCchhHHHHHHccc
Q 003025 752 KPQGVSKGVVAEKIFTTMAESGRHADFVLCIGDDRSDEDMFEIIGN 797 (856)
Q Consensus 752 ~p~gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~ 797 (856)
-|.+.-||..++.+++...+.|.+.+.|+++||+.||......++.
T Consensus 145 C~~NmCK~~il~~~~~~~~~~g~~~~rviYiGDG~nD~Cp~~~L~~ 190 (234)
T PF06888_consen 145 CPPNMCKGKILERLLQEQAQRGVPYDRVIYIGDGRNDFCPALRLRP 190 (234)
T ss_pred CCCccchHHHHHHHHHHHhhcCCCcceEEEECCCCCCcCcccccCC
Confidence 3566789999999998754557889999999999999987776653
|
It includes plant phosphatases with homology to the haloacid dehalogenase (HAD) superfamily [, ]. PHOSPHO1 is a phosphoethanolamine/phosphocholine phosphatase [], while PHOSPHO2 has high activity toward pyridoxal 5'-phosphate (PLP), and it is active at much lower level toward pyrophosphate, phosphoethanolamine (PEA)and phosphocholine (PCho) []. ; GO: 0016791 phosphatase activity |
| >TIGR01497 kdpB K+-transporting ATPase, B subunit | Back alignment and domain information |
|---|
Probab=96.80 E-value=0.0061 Score=73.49 Aligned_cols=67 Identities=9% Similarity=0.083 Sum_probs=51.8
Q ss_pred HHHHHHHcCCcEEEEEecCCCCCCCCCCCCCCCHHHHHHHHHHHhhCCCeEEEecCCChhhHHHhhcC
Q 003025 581 AIVSAYLRSKSRAILFDYDGTVMPQTSINKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSP 648 (856)
Q Consensus 581 ~i~~~y~~s~~rlI~~DlDGTLl~~~~~~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~ 648 (856)
...+.+.+...+.+++-+|++++..-.....+-+++.+++++| ++.|++++++||........+...
T Consensus 416 ~~~~~~a~~G~r~l~va~~~~~lG~i~l~D~~Rp~a~eaI~~l-~~~Gi~v~miTGD~~~ta~~iA~~ 482 (675)
T TIGR01497 416 QAVDQVARQGGTPLVVCEDNRIYGVIYLKDIVKGGIKERFAQL-RKMGIKTIMITGDNRLTAAAIAAE 482 (675)
T ss_pred HHHHHHHhCCCeEEEEEECCEEEEEEEecccchhHHHHHHHHH-HHCCCEEEEEcCCCHHHHHHHHHH
Confidence 3344555566788888888887752223556779999999996 889999999999999999998844
|
One sequence is apparently mis-annotated in the primary literature, but properly annotated by TIGR. |
| >TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254 | Back alignment and domain information |
|---|
Probab=96.80 E-value=0.002 Score=67.01 Aligned_cols=66 Identities=18% Similarity=0.142 Sum_probs=47.4
Q ss_pred HHHHHHHHHHHhhhcCCCcceEEEEeCCc-hhHHHHHHccccccCCCCCCCccEEEEEeCCCc----cccceEcCChhHH
Q 003025 758 KGVVAEKIFTTMAESGRHADFVLCIGDDR-SDEDMFEIIGNATSSGVLSSNASVFACTVGQKP----SKAKYYLDDAAEV 832 (856)
Q Consensus 758 KG~al~~Ll~~l~~~gi~~d~vlaiGD~~-ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~~----s~A~y~l~~~~eV 832 (856)
+....+.+++++. |++++++++|||+. +|+..-+.+|.. .+.+..|..+ ..+.|.+++..++
T Consensus 154 ~~~~~~~~~~~~~--~~~~~~~v~igD~~~~di~~A~~~G~~-----------~i~~~~~~~~~~~~~~~~~~~~~~~el 220 (224)
T TIGR02254 154 DKEIFNYALERMP--KFSKEEVLMIGDSLTADIKGGQNAGLD-----------TCWMNPDMHPNPDDIIPTYEIRSLEEL 220 (224)
T ss_pred CHHHHHHHHHHhc--CCCchheEEECCCcHHHHHHHHHCCCc-----------EEEECCCCCCCCCCCCCceEECCHHHH
Confidence 5566777777642 67899999999998 899999999974 2445544322 3466778888877
Q ss_pred HHHH
Q 003025 833 VTML 836 (856)
Q Consensus 833 ~~~L 836 (856)
..+|
T Consensus 221 ~~~~ 224 (224)
T TIGR02254 221 YEIL 224 (224)
T ss_pred HhhC
Confidence 6553
|
This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases. |
| >TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA | Back alignment and domain information |
|---|
Probab=96.80 E-value=0.0014 Score=62.59 Aligned_cols=54 Identities=17% Similarity=0.325 Sum_probs=42.1
Q ss_pred EEEEEecCCCCCCCCC-----CCCCCCHHHHHHHHHHHhhCCCeEEEecCCC--------hhhHHHhh
Q 003025 592 RAILFDYDGTVMPQTS-----INKAPSQAVISIINTLCNDARNTVFVVSGRG--------RDCLGKWF 646 (856)
Q Consensus 592 rlI~~DlDGTLl~~~~-----~~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~--------~~~l~~~~ 646 (856)
|+++||+||||++... ....+.+.+.++|+.| ++.|+.++|+|+++ ...+...+
T Consensus 1 k~~~~D~dgtL~~~~~~~~~~~~~~~~~~v~~~l~~L-~~~g~~l~i~Sn~~~~~~~~~~~~~~~~~l 67 (132)
T TIGR01662 1 KGVVLDLDGTLTDDVPYVDDEDERILYPEVPDALAEL-KEAGYKVVIVTNQSGIGRGKFSSGRVARRL 67 (132)
T ss_pred CEEEEeCCCceecCCCCCCCHHHheeCCCHHHHHHHH-HHCCCEEEEEECCccccccHHHHHHHHHHH
Confidence 6899999999996110 1245678899999997 78899999999998 55555555
|
In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme. |
| >PF06437 ISN1: IMP-specific 5'-nucleotidase; InterPro: IPR009453 The Saccharomyces cerevisiae ISN1 (YOR155c) gene encodes an IMP-specific 5'-nucleotidase, which catalyses degradation of IMP to inosine as part of the purine salvage pathway | Back alignment and domain information |
|---|
Probab=96.77 E-value=0.047 Score=60.01 Aligned_cols=204 Identities=22% Similarity=0.267 Sum_probs=116.6
Q ss_pred Ccccc----cCCHHHHHHHHHcCCcEEEEEecCCCCCCCCCCCCCCCHHHHHHHHHHHhhCCCeEEEecCCChhhHHHhh
Q 003025 571 DPNFR----KLSIDAIVSAYLRSKSRAILFDYDGTVMPQTSINKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWF 646 (856)
Q Consensus 571 ~~~f~----~l~~~~i~~~y~~s~~rlI~~DlDGTLl~~~~~~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~ 646 (856)
.|+|. -|++.+|...-+...-+|+-||=|+||.+.+ ..-.++..++.-|-+| -..|+.|.|+|.=++....++.
T Consensus 123 ~PSFNDvR~ILN~AQi~al~~~~~L~LvTFDgDvTLY~DG-~sl~~d~pvi~~ii~L-L~~gv~VgIVTAAGY~~a~kY~ 200 (408)
T PF06437_consen 123 PPSFNDVRHILNTAQIMALAKNYGLKLVTFDGDVTLYEDG-ASLEPDNPVIPRIIKL-LRRGVKVGIVTAAGYPGAEKYE 200 (408)
T ss_pred CCCHHHHHHHHHHHHHHHhcccCCceEEEEcCCcccccCC-CCCCCCchHHHHHHHH-HhcCCeEEEEeCCCCCChHHHH
Confidence 46664 2455555554445578999999999999833 2223456666666666 4569999999998887655554
Q ss_pred cCC------------------CCccE-EeeCCEEEEeCCC----------cceEecCCCCcccHH--------HHHHHHH
Q 003025 647 SPC------------------KKLGI-AAEHGYFMRWSAD----------EEWQNCGQSVDFGWI--------QIAEPVM 689 (856)
Q Consensus 647 ~~~------------------~~lgl-iaenG~~I~~~~~----------~~w~~~~~~~~~~w~--------~~v~~i~ 689 (856)
..+ .++.+ .+|.-|..+.... ..|.. +.-..|. +.++..+
T Consensus 201 ~RL~GLL~a~~~~~~Lt~~qk~~l~VMGGEsNYLfr~~~~~~~~L~~v~~~~W~~---~~m~~W~~~dI~~lLD~AE~~L 277 (408)
T PF06437_consen 201 ERLHGLLDAFKDSTDLTPEQKSNLYVMGGESNYLFRYDPESPHGLEFVPREEWLL---PEMKTWSEEDITELLDIAEAAL 277 (408)
T ss_pred HHHHHHHHHHHhccCCCHHHhcCEEEecccceeEEEecCCCCCCeEEccHHhccC---ccccCcCHHHHHHHHHHHHHHH
Confidence 322 12222 2344455555432 23421 1112342 2333334
Q ss_pred HHHhhc--CCcceEEecccceEEeeecCCCCCCchhHHHHHHHHHHHhcC------CCeEEEEcC--eEEEEEeCCCCHH
Q 003025 690 KLYTES--TDGSYIEIKESALVWHHRDADPGFGSSQAKELLDHLESVLAN------EPAAVKSGQ--FIVEVKPQGVSKG 759 (856)
Q Consensus 690 ~~~~~~--~~Gs~ie~k~~~l~~~~~~~dp~~~~~~a~el~~~L~~~l~~------~~~~v~~g~--~~vEI~p~gvsKG 759 (856)
....++ .| ..+-.|+-++..... ....+...+.+|+.-.++..+.. .++....|. -+++|-. |.
T Consensus 278 ~~~~~~l~Lp-a~IiRK~RAVGivP~-~~~ki~rE~LEE~VL~vq~~L~~~~~~~~ipfCAFNGGsDVwVDIGd----Ks 351 (408)
T PF06437_consen 278 RDCVKRLNLP-ATIIRKERAVGIVPK-PGVKIIREQLEEIVLTVQKTLEESPPGRRIPFCAFNGGSDVWVDIGD----KS 351 (408)
T ss_pred HHHHHHcCCC-eeEEeecceeeEecC-CCCcchhhhHHHHHHHHHHHHHhcCCCCCCceeeecCCcceEEEcCC----cH
Confidence 444433 34 344455555444332 11223334556655444444432 356666654 4778765 99
Q ss_pred HHHHHHHHHh-hhcCCCcceEEEEeCC
Q 003025 760 VVAEKIFTTM-AESGRHADFVLCIGDD 785 (856)
Q Consensus 760 ~al~~Ll~~l-~~~gi~~d~vlaiGD~ 785 (856)
.|++.+.+.+ ...+|.+.+++-+||-
T Consensus 352 ~GV~~lQ~y~~~~~~i~~~~tLHVGDQ 378 (408)
T PF06437_consen 352 LGVRALQKYFDPEGGIKPSETLHVGDQ 378 (408)
T ss_pred HhHHHHHHHHHhccCCCccceeeehhh
Confidence 9999888776 1237999999999994
|
; GO: 0000287 magnesium ion binding, 0016791 phosphatase activity, 0009117 nucleotide metabolic process |
| >PLN02919 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=96.72 E-value=0.0093 Score=76.13 Aligned_cols=75 Identities=15% Similarity=0.118 Sum_probs=55.6
Q ss_pred eEEEEcCeEEEEEeCCCCHHHHHHHHHHHhhhcCCCcceEEEEeCCchhHHHHHHccccccCCCCCCCccEEEEEeCCC-
Q 003025 740 AAVKSGQFIVEVKPQGVSKGVVAEKIFTTMAESGRHADFVLCIGDDRSDEDMFEIIGNATSSGVLSSNASVFACTVGQK- 818 (856)
Q Consensus 740 ~~v~~g~~~vEI~p~gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~- 818 (856)
..++.+...-.-+| +......+++++ +++++++++|||+.+|+..-+.+|.. ++.|..|..
T Consensus 206 d~iv~~~~~~~~KP----~Pe~~~~a~~~l---gv~p~e~v~IgDs~~Di~AA~~aGm~-----------~I~v~~~~~~ 267 (1057)
T PLN02919 206 DAIVSADAFENLKP----APDIFLAAAKIL---GVPTSECVVIEDALAGVQAARAAGMR-----------CIAVTTTLSE 267 (1057)
T ss_pred CEEEECcccccCCC----CHHHHHHHHHHc---CcCcccEEEEcCCHHHHHHHHHcCCE-----------EEEECCCCCH
Confidence 34444444333445 678888999999 99999999999999999999999973 355555532
Q ss_pred ----ccccceEcCChhHH
Q 003025 819 ----PSKAKYYLDDAAEV 832 (856)
Q Consensus 819 ----~s~A~y~l~~~~eV 832 (856)
...|.+++++..++
T Consensus 268 ~~L~~~~a~~vi~~l~el 285 (1057)
T PLN02919 268 EILKDAGPSLIRKDIGNI 285 (1057)
T ss_pred HHHhhCCCCEEECChHHC
Confidence 35677888888875
|
|
| >TIGR01511 ATPase-IB1_Cu copper-(or silver)-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=96.55 E-value=0.0099 Score=71.07 Aligned_cols=60 Identities=12% Similarity=0.160 Sum_probs=48.2
Q ss_pred cCCcEEEEEecCCCCCCCCCCCCCCCHHHHHHHHHHHhhCCCeEEEecCCChhhHHHhhcC
Q 003025 588 RSKSRAILFDYDGTVMPQTSINKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSP 648 (856)
Q Consensus 588 ~s~~rlI~~DlDGTLl~~~~~~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~ 648 (856)
+...+.+.++.||+++..-.....+-+.+.++|++| ++.|+.++++||.....++.....
T Consensus 382 ~~g~~~~~~~~~~~~~g~~~~~d~l~~~a~e~i~~L-k~~Gi~v~ilSgd~~~~a~~ia~~ 441 (562)
T TIGR01511 382 EQGSTSVLVAVNGELAGVFALEDQLRPEAKEVIQAL-KRRGIEPVMLTGDNRKTAKAVAKE 441 (562)
T ss_pred hCCCEEEEEEECCEEEEEEEecccccHHHHHHHHHH-HHcCCeEEEEcCCCHHHHHHHHHH
Confidence 344688999999998752213556789999999997 788999999999999988888743
|
One member from Halobacterium is annotated as "molybdenum-binding protein" although no evidence can be found for this classification. |
| >TIGR02252 DREG-2 REG-2-like, HAD superfamily (subfamily IA) hydrolase | Back alignment and domain information |
|---|
Probab=96.48 E-value=0.011 Score=60.75 Aligned_cols=37 Identities=19% Similarity=0.186 Sum_probs=33.0
Q ss_pred HHHHHHHHHHHhhhcCCCcceEEEEeCCc-hhHHHHHHccc
Q 003025 758 KGVVAEKIFTTMAESGRHADFVLCIGDDR-SDEDMFEIIGN 797 (856)
Q Consensus 758 KG~al~~Ll~~l~~~gi~~d~vlaiGD~~-ND~~Mf~~ag~ 797 (856)
+....+.+++++ |++++++++|||+. +|+..-+.+|.
T Consensus 162 ~~~~~~~~~~~~---~~~~~~~~~IgD~~~~Di~~A~~aG~ 199 (203)
T TIGR02252 162 DPKIFQEALERA---GISPEEALHIGDSLRNDYQGARAAGW 199 (203)
T ss_pred CHHHHHHHHHHc---CCChhHEEEECCCchHHHHHHHHcCC
Confidence 456788899998 99999999999997 99999999986
|
Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes. |
| >TIGR01522 ATPase-IIA2_Ca golgi membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=96.42 E-value=0.021 Score=71.88 Aligned_cols=164 Identities=20% Similarity=0.326 Sum_probs=100.3
Q ss_pred HHHHcCCcEEEEEecCC-----CCCCCCCCCCCCCHHHHHHHHHHHhhCCCeEEEecCCChhhHHHhhcCCCCccEEeeC
Q 003025 584 SAYLRSKSRAILFDYDG-----TVMPQTSINKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSPCKKLGIAAEH 658 (856)
Q Consensus 584 ~~y~~s~~rlI~~DlDG-----TLl~~~~~~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~~~~lgliaen 658 (856)
..|.+...|.+++=+++ |++..-....++-+.+.++|++| ++.|++++++||........... .+|+...+
T Consensus 496 ~~~a~~G~rvl~~A~~~~~~~l~~lGli~l~Dp~r~~~~~~i~~l-~~~Gi~v~miTGD~~~tA~~ia~---~~Gi~~~~ 571 (884)
T TIGR01522 496 AEMASAGLRVIAFASGPEKGQLTFLGLVGINDPPRPGVKEAVTTL-ITGGVRIIMITGDSQETAVSIAR---RLGMPSKT 571 (884)
T ss_pred HHHHhcCCEEEEEEEEcCCCCeEEEEEEeccCcchhHHHHHHHHH-HHCCCeEEEECCCCHHHHHHHHH---HcCCCCCC
Confidence 34555567888877765 44431114556789999999996 89999999999999999999984 44543322
Q ss_pred CEEEEeCCCcceEecCCCCcccHHHHHHHHHHHHhhcCCcceEEecccceEEeeecCCCCCCchhHHHHHHHHHHHhcCC
Q 003025 659 GYFMRWSADEEWQNCGQSVDFGWIQIAEPVMKLYTESTDGSYIEIKESALVWHHRDADPGFGSSQAKELLDHLESVLANE 738 (856)
Q Consensus 659 G~~I~~~~~~~w~~~~~~~~~~w~~~v~~i~~~~~~~~~Gs~ie~k~~~l~~~~~~~dp~~~~~~a~el~~~L~~~l~~~ 738 (856)
+..+ .|..++. .+ .+++.+ .+.+.
T Consensus 572 ~~~v----------------------------------~g~~l~~-----------~~-------~~~l~~----~~~~~ 595 (884)
T TIGR01522 572 SQSV----------------------------------SGEKLDA-----------MD-------DQQLSQ----IVPKV 595 (884)
T ss_pred Ccee----------------------------------EhHHhHh-----------CC-------HHHHHH----HhhcC
Confidence 1111 0000000 00 011211 22111
Q ss_pred CeEEEEcCeEEEEEeCCCCHHHHHHHHHHHhhhcCCCcceEEEEeCCchhHHHHHHccccccCCCCCCCccEEEEEeCCC
Q 003025 739 PAAVKSGQFIVEVKPQGVSKGVVAEKIFTTMAESGRHADFVLCIGDDRSDEDMFEIIGNATSSGVLSSNASVFACTVGQK 818 (856)
Q Consensus 739 ~~~v~~g~~~vEI~p~gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~ 818 (856)
.-+-.+.| -.|...++.+-+. | +.|+++||+.||.++++.|+. +|++|..
T Consensus 596 -------~Vfar~~P--~~K~~iv~~lq~~----g---~~v~mvGDGvND~pAl~~AdV--------------Gia~g~~ 645 (884)
T TIGR01522 596 -------AVFARASP--EHKMKIVKALQKR----G---DVVAMTGDGVNDAPALKLADI--------------GVAMGQT 645 (884)
T ss_pred -------eEEEECCH--HHHHHHHHHHHHC----C---CEEEEECCCcccHHHHHhCCe--------------eEecCCC
Confidence 11222333 3476666665332 3 679999999999999999984 6788742
Q ss_pred -----ccccceEc--CChhHHHHHHH
Q 003025 819 -----PSKAKYYL--DDAAEVVTMLE 837 (856)
Q Consensus 819 -----~s~A~y~l--~~~~eV~~~L~ 837 (856)
+..|++++ ++...+.++++
T Consensus 646 g~~va~~aaDivl~dd~~~~i~~~i~ 671 (884)
T TIGR01522 646 GTDVAKEAADMILTDDDFATILSAIE 671 (884)
T ss_pred cCHHHHHhcCEEEcCCCHHHHHHHHH
Confidence 35688888 55777766654
|
The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116. |
| >PRK08238 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=96.40 E-value=0.019 Score=66.92 Aligned_cols=34 Identities=6% Similarity=0.092 Sum_probs=25.4
Q ss_pred CHHHHHHHHHHHhhCCCeEEEecCCChhhHHHhhc
Q 003025 613 SQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFS 647 (856)
Q Consensus 613 s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~ 647 (856)
.+.+.+.|+++ ++.|.+++|+|+.+...++....
T Consensus 74 ~pga~e~L~~l-k~~G~~v~LaTas~~~~a~~i~~ 107 (479)
T PRK08238 74 NEEVLDYLRAE-RAAGRKLVLATASDERLAQAVAA 107 (479)
T ss_pred ChhHHHHHHHH-HHCCCEEEEEeCCCHHHHHHHHH
Confidence 46777788885 77788888888888777776663
|
|
| >TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548 | Back alignment and domain information |
|---|
Probab=96.35 E-value=0.0059 Score=62.54 Aligned_cols=34 Identities=15% Similarity=-0.041 Sum_probs=29.9
Q ss_pred HHHHHHHHHHHhhhcCCCcceEEEEeCCchhHHHHHH
Q 003025 758 KGVVAEKIFTTMAESGRHADFVLCIGDDRSDEDMFEI 794 (856)
Q Consensus 758 KG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ 794 (856)
+...+..+++.+ |++++++++|||+.+|+.+-+.
T Consensus 163 ~p~~~~~~~~~~---~~~~~~~i~vGD~~~Di~aA~~ 196 (197)
T TIGR01548 163 NPEPLILAAKAL---GVEACHAAMVGDTVDDIITGRK 196 (197)
T ss_pred CHHHHHHHHHHh---CcCcccEEEEeCCHHHHHHHHh
Confidence 677788888988 9999999999999999987654
|
All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's. |
| >PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase) | Back alignment and domain information |
|---|
Probab=96.35 E-value=0.0045 Score=63.72 Aligned_cols=37 Identities=11% Similarity=0.131 Sum_probs=31.2
Q ss_pred CCCHHHHHHHHHHHhhCCCeEEEecCCChhhHHHhhcC
Q 003025 611 APSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSP 648 (856)
Q Consensus 611 ~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~ 648 (856)
.+-+.+.++|+.| ++.|+.++++||-+..........
T Consensus 127 ~~~~~~~~~l~~L-~~~Gi~~~i~TGD~~~~a~~~~~~ 163 (215)
T PF00702_consen 127 PLRPGAKEALQEL-KEAGIKVAILTGDNESTASAIAKQ 163 (215)
T ss_dssp EBHTTHHHHHHHH-HHTTEEEEEEESSEHHHHHHHHHH
T ss_pred cchhhhhhhhhhh-hccCcceeeeeccccccccccccc
Confidence 3456789999997 778999999999999999888843
|
This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J .... |
| >PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=96.34 E-value=0.019 Score=64.19 Aligned_cols=47 Identities=21% Similarity=0.326 Sum_probs=38.0
Q ss_pred CcEEEEEecCCCCCCCCC--------CCCCCCHHHHHHHHHHHhhCCCeEEEecCC
Q 003025 590 KSRAILFDYDGTVMPQTS--------INKAPSQAVISIINTLCNDARNTVFVVSGR 637 (856)
Q Consensus 590 ~~rlI~~DlDGTLl~~~~--------~~~~~s~~~~~aL~~L~~d~g~~V~I~TGR 637 (856)
|.|++++|.||||+...+ ....+-+.+.+.|..| +++|.+++|+|+.
T Consensus 1 ~~k~l~lDrDgtl~~~~~~~y~~~~~~~~~l~pGV~e~L~~L-k~~G~kL~IvTNq 55 (354)
T PRK05446 1 MQKILFIDRDGTLIEEPPTDFQVDSLDKLAFEPGVIPALLKL-QKAGYKLVMVTNQ 55 (354)
T ss_pred CCcEEEEeCCCCccCCCCccccccCcccceECcCHHHHHHHH-HhCCCeEEEEECC
Confidence 578999999999998432 1234668899999997 8889999999986
|
|
| >PRK11033 zntA zinc/cadmium/mercury/lead-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=96.27 E-value=0.017 Score=71.14 Aligned_cols=64 Identities=8% Similarity=0.058 Sum_probs=50.8
Q ss_pred HHHHcCCcEEEEEecCCCCCCCCCCCCCCCHHHHHHHHHHHhhCCCeEEEecCCChhhHHHhhcC
Q 003025 584 SAYLRSKSRAILFDYDGTVMPQTSINKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSP 648 (856)
Q Consensus 584 ~~y~~s~~rlI~~DlDGTLl~~~~~~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~ 648 (856)
+.+.....+.+++=+||+++..-.-..++-+...++|++| ++.|+.++++||........+.+.
T Consensus 541 ~~~~~~g~~~v~va~~~~~~g~i~l~d~~r~~a~~~i~~L-~~~gi~~~llTGd~~~~a~~ia~~ 604 (741)
T PRK11033 541 NELESAGKTVVLVLRNDDVLGLIALQDTLRADARQAISEL-KALGIKGVMLTGDNPRAAAAIAGE 604 (741)
T ss_pred HHHHhCCCEEEEEEECCEEEEEEEEecCCchhHHHHHHHH-HHCCCEEEEEcCCCHHHHHHHHHH
Confidence 4455666788888899987742113456789999999997 888999999999999999998843
|
|
| >TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II | Back alignment and domain information |
|---|
Probab=96.21 E-value=0.016 Score=59.25 Aligned_cols=38 Identities=18% Similarity=0.129 Sum_probs=34.5
Q ss_pred HHHHHHHHHHHhhhcCCCcceEEEEeCCchhHHHHHHcccc
Q 003025 758 KGVVAEKIFTTMAESGRHADFVLCIGDDRSDEDMFEIIGNA 798 (856)
Q Consensus 758 KG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~ 798 (856)
+....+.+++++ |++++++++|||+.+|+..-+.+|..
T Consensus 150 ~~~~~~~~~~~~---~~~p~~~~~vgD~~~Di~~A~~~G~~ 187 (198)
T TIGR01428 150 APQVYQLALEAL---GVPPDEVLFVASNPWDLGGAKKFGFK 187 (198)
T ss_pred CHHHHHHHHHHh---CCChhhEEEEeCCHHHHHHHHHCCCc
Confidence 567788999999 99999999999999999999999973
|
Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related. |
| >TIGR02247 HAD-1A3-hyp Epoxide hydrolase N-terminal domain-like phosphatase | Back alignment and domain information |
|---|
Probab=96.15 E-value=0.044 Score=56.61 Aligned_cols=37 Identities=11% Similarity=0.129 Sum_probs=33.6
Q ss_pred HHHHHHHHHHHhhhcCCCcceEEEEeCCchhHHHHHHccc
Q 003025 758 KGVVAEKIFTTMAESGRHADFVLCIGDDRSDEDMFEIIGN 797 (856)
Q Consensus 758 KG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~ 797 (856)
.....+.+++++ |++++++++|||+..|+.+-+.+|.
T Consensus 154 ~p~~~~~~~~~~---g~~~~~~l~i~D~~~di~aA~~aG~ 190 (211)
T TIGR02247 154 DPRIYQLMLERL---GVAPEECVFLDDLGSNLKPAAALGI 190 (211)
T ss_pred CHHHHHHHHHHc---CCCHHHeEEEcCCHHHHHHHHHcCC
Confidence 356788888998 9999999999999999999999996
|
These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs (although the first motif is unusual in the replacement of the more common aspartate with glycine...). The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA. |
| >TIGR01456 CECR5 HAD-superfamily class IIA hydrolase, TIGR01456, CECR5 | Back alignment and domain information |
|---|
Probab=96.14 E-value=0.37 Score=53.43 Aligned_cols=47 Identities=19% Similarity=0.354 Sum_probs=35.9
Q ss_pred EEEEecCCCCCCCCCCCCCCCHHHHHHHHHHHhhC----CCeEEEec---CCChhhHHH
Q 003025 593 AILFDYDGTVMPQTSINKAPSQAVISIINTLCNDA----RNTVFVVS---GRGRDCLGK 644 (856)
Q Consensus 593 lI~~DlDGTLl~~~~~~~~~s~~~~~aL~~L~~d~----g~~V~I~T---GR~~~~l~~ 644 (856)
.|+||+||||.. ...+-+...++|+.| ... |..+.++| |++.....+
T Consensus 2 ~~ifD~DGvL~~----g~~~i~ga~eal~~L-~~~~~~~g~~~~flTNn~g~s~~~~~~ 55 (321)
T TIGR01456 2 GFAFDIDGVLFR----GKKPIAGASDALRRL-NRNQGQLKIPYIFLTNGGGFSERARAE 55 (321)
T ss_pred EEEEeCcCceEC----CccccHHHHHHHHHH-hccccccCCCEEEEecCCCCCHHHHHH
Confidence 589999999997 345588999999998 666 88888777 555665433
|
The Schizosaccharomyces pombe sequence (EGAD|138276) is annotated as "phosphatidyl synthase," however this is due entirely to a C-terminal region of the protein (outside the region of similarity of this model) which is highly homologous to a family of CDP-alcohol phosphatidyltransferases. (Thus, the annotation of GP|4226073 from C. elegans as similar to phosphatidyl synthase, is a mistake as this gene does not contain the C-terminal portion). The physical connection of the phosphatidyl synthase and the HAD-superfamily hydrolase domain in S. pombe may, however, be an important clue to the substrate for the hydrolases in this equivalog. |
| >PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A | Back alignment and domain information |
|---|
Probab=96.14 E-value=0.0016 Score=59.31 Aligned_cols=55 Identities=22% Similarity=0.444 Sum_probs=39.5
Q ss_pred EEEecCCCCCCCCCCCCCCCHHHHHHHHHHHhhCCCeEEEecCCChhhHHHhhcCCCCcc
Q 003025 594 ILFDYDGTVMPQTSINKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSPCKKLG 653 (856)
Q Consensus 594 I~~DlDGTLl~~~~~~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~~~~lg 653 (856)
|++|+||||.. ..++-+.+.++|++| ++.|.+++++|-.+...-..+...+..+|
T Consensus 1 ~l~D~dGvl~~----g~~~ipga~e~l~~L-~~~g~~~~~lTNns~~s~~~~~~~L~~~G 55 (101)
T PF13344_consen 1 FLFDLDGVLYN----GNEPIPGAVEALDAL-RERGKPVVFLTNNSSRSREEYAKKLKKLG 55 (101)
T ss_dssp EEEESTTTSEE----TTEE-TTHHHHHHHH-HHTTSEEEEEES-SSS-HHHHHHHHHHTT
T ss_pred CEEeCccEeEe----CCCcCcCHHHHHHHH-HHcCCCEEEEeCCCCCCHHHHHHHHHhcC
Confidence 68999999997 456678889999998 88899999999877655444443333333
|
... |
| >COG1011 Predicted hydrolase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=96.08 E-value=0.012 Score=61.33 Aligned_cols=64 Identities=19% Similarity=0.252 Sum_probs=47.1
Q ss_pred HHHHHHHHHHhhhcCCCcceEEEEeCCc-hhHHHHHHccccccCCCCCCCccEEEEEeCCCc-------cccceEcCChh
Q 003025 759 GVVAEKIFTTMAESGRHADFVLCIGDDR-SDEDMFEIIGNATSSGVLSSNASVFACTVGQKP-------SKAKYYLDDAA 830 (856)
Q Consensus 759 G~al~~Ll~~l~~~gi~~d~vlaiGD~~-ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~~-------s~A~y~l~~~~ 830 (856)
...-+.+++++ |+++++++.|||+. ||+...+.+|.. +|-+.... ....+.+.+..
T Consensus 157 ~~~f~~~~~~~---g~~p~~~l~VgD~~~~di~gA~~~G~~-------------~vwi~~~~~~~~~~~~~~~~~i~~l~ 220 (229)
T COG1011 157 PEIFEYALEKL---GVPPEEALFVGDSLENDILGARALGMK-------------TVWINRGGKPLPDALEAPDYEISSLA 220 (229)
T ss_pred cHHHHHHHHHc---CCCcceEEEECCChhhhhHHHHhcCcE-------------EEEECCCCCCCCCCccCCceEEcCHH
Confidence 45667888888 99999999999985 887999999873 45444322 34566677777
Q ss_pred HHHHHHHH
Q 003025 831 EVVTMLEA 838 (856)
Q Consensus 831 eV~~~L~~ 838 (856)
++..++..
T Consensus 221 ~l~~~~~~ 228 (229)
T COG1011 221 ELLDLLER 228 (229)
T ss_pred HHHHHHhh
Confidence 77777654
|
|
| >COG0637 Predicted phosphatase/phosphohexomutase [General function prediction only] | Back alignment and domain information |
|---|
Probab=96.00 E-value=0.0099 Score=62.26 Aligned_cols=52 Identities=10% Similarity=0.089 Sum_probs=40.4
Q ss_pred eEEEEcCeEEEEEeCCCCHHHHHHHHHHHhhhcCCCcceEEEEeCCchhHHHHHHcccc
Q 003025 740 AAVKSGQFIVEVKPQGVSKGVVAEKIFTTMAESGRHADFVLCIGDDRSDEDMFEIIGNA 798 (856)
Q Consensus 740 ~~v~~g~~~vEI~p~gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~ 798 (856)
-.++.+.....-+| ....-...+++| |..|+++++|.|+.+.+..-+++|..
T Consensus 130 ~~~v~~~dv~~~KP----~Pd~yL~Aa~~L---gv~P~~CvviEDs~~Gi~Aa~aAGm~ 181 (221)
T COG0637 130 DVIVTADDVARGKP----APDIYLLAAERL---GVDPEECVVVEDSPAGIQAAKAAGMR 181 (221)
T ss_pred chhccHHHHhcCCC----CCHHHHHHHHHc---CCChHHeEEEecchhHHHHHHHCCCE
Confidence 34445555555566 556666777778 99999999999999999999999973
|
|
| >KOG2941 consensus Beta-1,4-mannosyltransferase [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=95.94 E-value=0.16 Score=55.15 Aligned_cols=166 Identities=16% Similarity=0.209 Sum_probs=115.0
Q ss_pred CCeEEEeccCccccCCHHHHHHHHHHHHHh-------CCCCcCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccC
Q 003025 335 GKTVLLGVDDMDIFKGVDLKLLAMEHLLKQ-------HPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFG 407 (856)
Q Consensus 335 ~k~iil~VdRld~~KGi~~~l~A~~~ll~~-------~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~~~~lv~~IN~~~~ 407 (856)
...++++--...+-..+.-++.|.+..-++ +|. + |.+|. |.||..+.+.++|++.
T Consensus 254 ~pallvsSTswTpDEdf~ILL~AL~~y~~~~~~~~~~lP~----l-lciIT----GKGPlkE~Y~~~I~~~--------- 315 (444)
T KOG2941|consen 254 RPALLVSSTSWTPDEDFGILLEALVIYEEQLYDKTHNLPS----L-LCIIT----GKGPLKEKYSQEIHEK--------- 315 (444)
T ss_pred CCeEEEecCCCCCcccHHHHHHHHHhhhhhhhhccCCCCc----E-EEEEc----CCCchhHHHHHHHHHh---------
Confidence 457888888999999999999999854221 232 2 34444 5788888888888776
Q ss_pred CCCcccEEEEcCCCCHHHHHHHHHhcce--eeeccccccCCCc--ccceeeeecCCCCCCCCCCCCCCCCceEEecCCcc
Q 003025 408 RPGYEPVVFIDKPVTLSERAAYYTIAEC--VVVTAVRDGMNLT--PYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIG 483 (856)
Q Consensus 408 ~~~~~pvv~~~~~v~~~el~aly~~ADv--~vvtS~~EG~nLv--~~Ea~a~~~~~~~~~~~~~~~~~~~g~lV~Se~~G 483 (856)
.|+.|.+..--++-++.+.++..||. |+=||. -|.-|. +..-.-| +-|+++-.|.-
T Consensus 316 --~~~~v~~~tpWL~aEDYP~ll~saDlGVcLHtSS-SGLDLPMKVVDMFGc-----------------glPvcA~~fkc 375 (444)
T KOG2941|consen 316 --NLQHVQVCTPWLEAEDYPKLLASADLGVCLHTSS-SGLDLPMKVVDMFGC-----------------GLPVCAVNFKC 375 (444)
T ss_pred --cccceeeeecccccccchhHhhccccceEeeecC-cccCcchhHHHhhcC-----------------CCceeeecchh
Confidence 77788888888999999999999995 555554 344443 3344445 33777778875
Q ss_pred ccccc---CCceeeCCCCHHHHHHHHHHHHc-C--CHHHHHHHHHHHhhhhhcCCHHHHHHHHHHHH
Q 003025 484 CSPSL---SGAIRVNPWNIEATAEAMHEAIQ-M--NEAEKQLRHEKHYRYVSTHDVAYWARSFFQDM 544 (856)
Q Consensus 484 ~~~~l---~~al~VnP~d~~~~A~ai~~aL~-m--~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~l 544 (856)
..|.+ .+|++++ |.+++|+.|..+.+ . +..+- .+.++.+.+....+|.+++-+..
T Consensus 376 l~ELVkh~eNGlvF~--Ds~eLa~ql~~lf~~fp~~a~~l----~~lkkn~~e~~e~RW~~~W~~~~ 436 (444)
T KOG2941|consen 376 LDELVKHGENGLVFE--DSEELAEQLQMLFKNFPDNADEL----NQLKKNLREEQELRWDESWERTA 436 (444)
T ss_pred HHHHHhcCCCceEec--cHHHHHHHHHHHHhcCCCCHHHH----HHHHHhhHHHHhhhHHHHHHHhh
Confidence 55555 3599986 89999999999987 2 22222 23344455556688888775543
|
|
| >TIGR01106 ATPase-IIC_X-K sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit | Back alignment and domain information |
|---|
Probab=95.90 E-value=0.028 Score=71.63 Aligned_cols=43 Identities=21% Similarity=0.189 Sum_probs=36.4
Q ss_pred CCCCCHHHHHHHHHHHhhCCCeEEEecCCChhhHHHhhcCCCCccEE
Q 003025 609 NKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSPCKKLGIA 655 (856)
Q Consensus 609 ~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~~~~lgli 655 (856)
...+-+++.++++++ ++.|+.|+++|||....+..... .++++
T Consensus 566 ~Dplr~~v~~aI~~l-~~~Gi~v~~~TGd~~~ta~~ia~---~~gi~ 608 (997)
T TIGR01106 566 IDPPRAAVPDAVGKC-RSAGIKVIMVTGDHPITAKAIAK---GVGII 608 (997)
T ss_pred cCCChHHHHHHHHHH-HHCCCeEEEECCCCHHHHHHHHH---HcCCC
Confidence 456779999999995 89999999999999999999885 44554
|
Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps. |
| >PRK01122 potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Probab=95.83 E-value=0.044 Score=66.33 Aligned_cols=65 Identities=9% Similarity=0.093 Sum_probs=50.4
Q ss_pred HHHHHcCCcEEEEEecCCCCCCCCCCCCCCCHHHHHHHHHHHhhCCCeEEEecCCChhhHHHhhcC
Q 003025 583 VSAYLRSKSRAILFDYDGTVMPQTSINKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSP 648 (856)
Q Consensus 583 ~~~y~~s~~rlI~~DlDGTLl~~~~~~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~ 648 (856)
.+.+.+...+.+++-.|++++..-.....+-+++.+++++| ++.|++++++||-.......+..+
T Consensus 417 ~~~~a~~G~~~l~va~~~~~lG~i~l~D~~R~~~~eai~~L-r~~GI~vvMiTGDn~~TA~aIA~e 481 (679)
T PRK01122 417 VDEVARKGGTPLVVAEDNRVLGVIYLKDIVKPGIKERFAEL-RKMGIKTVMITGDNPLTAAAIAAE 481 (679)
T ss_pred HHHHHhCCCcEEEEEECCeEEEEEEEeccCchhHHHHHHHH-HHCCCeEEEECCCCHHHHHHHHHH
Confidence 34455556677777789888752223456789999999995 999999999999999999998843
|
|
| >COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=95.77 E-value=0.032 Score=54.54 Aligned_cols=59 Identities=19% Similarity=0.247 Sum_probs=51.7
Q ss_pred HcCCcEEEEEecCCCCCCCCCCCCCCCHHHHHHHHHHHhhCCCeEEEecCCChhhHHHhhcC
Q 003025 587 LRSKSRAILFDYDGTVMPQTSINKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSP 648 (856)
Q Consensus 587 ~~s~~rlI~~DlDGTLl~~~~~~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~ 648 (856)
++..+|-|++|+|.||++. .+...++++++=+.++ ++.|+.++|+|--+..-+..+...
T Consensus 24 ~~~Gikgvi~DlDNTLv~w--d~~~~tpe~~~W~~e~-k~~gi~v~vvSNn~e~RV~~~~~~ 82 (175)
T COG2179 24 KAHGIKGVILDLDNTLVPW--DNPDATPELRAWLAEL-KEAGIKVVVVSNNKESRVARAAEK 82 (175)
T ss_pred HHcCCcEEEEeccCceecc--cCCCCCHHHHHHHHHH-HhcCCEEEEEeCCCHHHHHhhhhh
Confidence 4567999999999999985 4667889999999997 889999999999999999888843
|
|
| >TIGR01993 Pyr-5-nucltdase pyrimidine 5'-nucleotidase | Back alignment and domain information |
|---|
Probab=95.74 E-value=0.02 Score=57.84 Aligned_cols=37 Identities=14% Similarity=0.165 Sum_probs=34.0
Q ss_pred HHHHHHHHHHHhhhcCCCcceEEEEeCCchhHHHHHHccc
Q 003025 758 KGVVAEKIFTTMAESGRHADFVLCIGDDRSDEDMFEIIGN 797 (856)
Q Consensus 758 KG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~ 797 (856)
+....+.+++++ |..++++++|||+..|+..-+.+|.
T Consensus 143 ~p~~~~~~~~~~---~~~~~~~l~vgD~~~di~aA~~~G~ 179 (184)
T TIGR01993 143 SPQAYEKALREA---GVDPERAIFFDDSARNIAAAKALGM 179 (184)
T ss_pred CHHHHHHHHHHh---CCCccceEEEeCCHHHHHHHHHcCC
Confidence 567888999999 9999999999999999999999986
|
These enzymes are members of the haloacid dehalogenase (HAD) superfamily of hydrolases, specifically the IA subfamily (variant 3, TIGR01509). |
| >TIGR01116 ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=95.72 E-value=0.032 Score=70.58 Aligned_cols=40 Identities=15% Similarity=0.236 Sum_probs=34.7
Q ss_pred CCCCCCHHHHHHHHHHHhhCCCeEEEecCCChhhHHHhhcC
Q 003025 608 INKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSP 648 (856)
Q Consensus 608 ~~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~ 648 (856)
...++-+++.++|++| ++.|++++++||............
T Consensus 534 ~~Dplr~~v~e~I~~l-~~aGI~v~miTGD~~~tA~~ia~~ 573 (917)
T TIGR01116 534 MLDPPRPEVADAIEKC-RTAGIRVIMITGDNKETAEAICRR 573 (917)
T ss_pred eeCCCchhHHHHHHHH-HHCCCEEEEecCCCHHHHHHHHHH
Confidence 3456789999999996 999999999999999999888843
|
The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1, the latter of which is modelled by TIGR01522. |
| >PRK14010 potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Probab=95.72 E-value=0.053 Score=65.58 Aligned_cols=69 Identities=9% Similarity=0.143 Sum_probs=49.9
Q ss_pred HHHHHHHHHcCCcEEEEEecCCCCCCCCCCCCCCCHHHHHHHHHHHhhCCCeEEEecCCChhhHHHhhcC
Q 003025 579 IDAIVSAYLRSKSRAILFDYDGTVMPQTSINKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSP 648 (856)
Q Consensus 579 ~~~i~~~y~~s~~rlI~~DlDGTLl~~~~~~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~ 648 (856)
++...+.+.+...+.++.-.|++++..-.....+-+++.+++++| ++.|++++++||-..........+
T Consensus 409 ~~~~~~~~a~~G~~~l~v~~~~~~lG~i~l~Dp~R~~a~e~I~~L-r~~GI~vvMiTGDn~~TA~aIA~e 477 (673)
T PRK14010 409 LDALVKGVSKKGGTPLVVLEDNEILGVIYLKDVIKDGLVERFREL-REMGIETVMCTGDNELTAATIAKE 477 (673)
T ss_pred HHHHHHHHHhCCCeEEEEEECCEEEEEEEeecCCcHHHHHHHHHH-HHCCCeEEEECCCCHHHHHHHHHH
Confidence 344445555555565555457777642113456789999999995 889999999999999999998843
|
|
| >TIGR01517 ATPase-IIB_Ca plasma-membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=95.68 E-value=0.062 Score=68.28 Aligned_cols=138 Identities=18% Similarity=0.220 Sum_probs=88.5
Q ss_pred CCCCCHHHHHHHHHHHhhCCCeEEEecCCChhhHHHhhcCCCCccEEeeCCEEEEeCCCcceEecCCCCcccHHHHHHHH
Q 003025 609 NKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSPCKKLGIAAEHGYFMRWSADEEWQNCGQSVDFGWIQIAEPV 688 (856)
Q Consensus 609 ~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~~~~lgliaenG~~I~~~~~~~w~~~~~~~~~~w~~~v~~i 688 (856)
...+-+++.+++++| ++.|++++++||........... .+|+...++..+.
T Consensus 577 ~Dplr~~~~~aI~~l-~~aGI~v~miTGD~~~tA~~iA~---~~GI~~~~~~vi~------------------------- 627 (941)
T TIGR01517 577 KDPLRPGVREAVQEC-QRAGITVRMVTGDNIDTAKAIAR---NCGILTFGGLAME------------------------- 627 (941)
T ss_pred cCCCchhHHHHHHHH-HHCCCEEEEECCCChHHHHHHHH---HcCCCCCCceEee-------------------------
Confidence 446778999999995 88999999999999999999884 4455433221110
Q ss_pred HHHHhhcCCcceEEecccceEEeeecCCCCCCchhHHHHHHHHHHHhcCCCeEEEEcCeEEEEEeCCCCHHHHHHHHHHH
Q 003025 689 MKLYTESTDGSYIEIKESALVWHHRDADPGFGSSQAKELLDHLESVLANEPAAVKSGQFIVEVKPQGVSKGVVAEKIFTT 768 (856)
Q Consensus 689 ~~~~~~~~~Gs~ie~k~~~l~~~~~~~dp~~~~~~a~el~~~L~~~l~~~~~~v~~g~~~vEI~p~gvsKG~al~~Ll~~ 768 (856)
|..++ ... .+++.+ .+.+. .-+-.+.|. .|...++.+.++
T Consensus 628 ---------G~~~~-----------~l~-------~~el~~----~i~~~-------~Vfar~sPe--~K~~iV~~lq~~ 667 (941)
T TIGR01517 628 ---------GKEFR-----------RLV-------YEEMDP----ILPKL-------RVLARSSPL--DKQLLVLMLKDM 667 (941)
T ss_pred ---------HHHhh-----------hCC-------HHHHHH----HhccC-------eEEEECCHH--HHHHHHHHHHHC
Confidence 00000 000 011222 22111 123445564 488888887553
Q ss_pred hhhcCCCcceEEEEeCCchhHHHHHHccccccCCCCCCCccEEEEEeC-CC----ccccceEcC--ChhHHHHHH
Q 003025 769 MAESGRHADFVLCIGDDRSDEDMFEIIGNATSSGVLSSNASVFACTVG-QK----PSKAKYYLD--DAAEVVTML 836 (856)
Q Consensus 769 l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG-~~----~s~A~y~l~--~~~eV~~~L 836 (856)
| .-|.++||+.||.++++.|.. ++++| .. +..|++++- +...+.+++
T Consensus 668 ----g---~vVam~GDGvNDapALk~AdV--------------GIAmg~~gtdvAk~aADivL~dd~f~~I~~~i 721 (941)
T TIGR01517 668 ----G---EVVAVTGDGTNDAPALKLADV--------------GFSMGISGTEVAKEASDIILLDDNFASIVRAV 721 (941)
T ss_pred ----C---CEEEEECCCCchHHHHHhCCc--------------ceecCCCccHHHHHhCCEEEecCCHHHHHHHH
Confidence 3 469999999999999999984 67887 32 567888874 456665555
|
The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1), which are modelled by the corresponding TIGR01116 and TIGR01522. This model is well separated from the two others. |
| >KOG3120 consensus Predicted haloacid dehalogenase-like hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=95.61 E-value=0.092 Score=53.56 Aligned_cols=45 Identities=18% Similarity=0.347 Sum_probs=38.0
Q ss_pred eEEEEEeCCCCHHHHHHHHHHHhhhcCCCcceEEEEeCCchhHHH
Q 003025 747 FIVEVKPQGVSKGVVAEKIFTTMAESGRHADFVLCIGDDRSDEDM 791 (856)
Q Consensus 747 ~~vEI~p~gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~M 791 (856)
+.....|.+.=||..+..+.......|+..+.++++||+.||+.-
T Consensus 153 hsC~~CPsNmCKg~Vl~~~~~s~~~~gv~yer~iYvGDG~nD~CP 197 (256)
T KOG3120|consen 153 HSCNLCPSNMCKGLVLDELVASQLKDGVRYERLIYVGDGANDFCP 197 (256)
T ss_pred CccCcCchhhhhhHHHHHHHHHHhhcCCceeeEEEEcCCCCCcCc
Confidence 444457888889999999988777779999999999999999843
|
|
| >PTZ00445 p36-lilke protein; Provisional | Back alignment and domain information |
|---|
Probab=95.46 E-value=0.028 Score=57.41 Aligned_cols=159 Identities=18% Similarity=0.182 Sum_probs=96.7
Q ss_pred CHHHHHHHHHcCCcEEEEEecCCCCCCCCC---CCCC---------CCHHHHHHHHHHHhhCCCeEEEecCCChhhHHHh
Q 003025 578 SIDAIVSAYLRSKSRAILFDYDGTVMPQTS---INKA---------PSQAVISIINTLCNDARNTVFVVSGRGRDCLGKW 645 (856)
Q Consensus 578 ~~~~i~~~y~~s~~rlI~~DlDGTLl~~~~---~~~~---------~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~ 645 (856)
.++.+++.+++..+|+|++|+|-||+..-+ .+.. ++++....+++| .+.|+.|+|+|=-+...
T Consensus 30 ~~~~~v~~L~~~GIk~Va~D~DnTlI~~HsgG~~~~~~~~~~~~~~~tpefk~~~~~l-~~~~I~v~VVTfSd~~~---- 104 (219)
T PTZ00445 30 SADKFVDLLNECGIKVIASDFDLTMITKHSGGYIDPDNDDIRVLTSVTPDFKILGKRL-KNSNIKISVVTFSDKEL---- 104 (219)
T ss_pred HHHHHHHHHHHcCCeEEEecchhhhhhhhcccccCCCcchhhhhccCCHHHHHHHHHH-HHCCCeEEEEEccchhh----
Confidence 356678888999999999999999997111 1222 689999999996 88999999999554433
Q ss_pred hcCCCCccEEeeCCEEEEeCCCcceEecCCCCcccHHHHHHHHHHHHhhcCCcceEEecccceEEeeecCCCCCCchhHH
Q 003025 646 FSPCKKLGIAAEHGYFMRWSADEEWQNCGQSVDFGWIQIAEPVMKLYTESTDGSYIEIKESALVWHHRDADPGFGSSQAK 725 (856)
Q Consensus 646 ~~~~~~lgliaenG~~I~~~~~~~w~~~~~~~~~~w~~~v~~i~~~~~~~~~Gs~ie~k~~~l~~~~~~~dp~~~~~~a~ 725 (856)
+ +. ..++.+|. |+ +.++..++.- ....-++. ++.|. |.+. +..
T Consensus 105 ~---~~----~~~~~~Is--g~---------------~li~~~lk~s---~~~~~i~~-----~~~yy---p~~w--~~p 147 (219)
T PTZ00445 105 I---PS----ENRPRYIS--GD---------------RMVEAALKKS---KCDFKIKK-----VYAYY---PKFW--QEP 147 (219)
T ss_pred c---cc----cCCcceec--hH---------------HHHHHHHHhc---Cccceeee-----eeeeC---Cccc--CCh
Confidence 1 10 01122221 11 1222222210 00111111 11111 1111 111
Q ss_pred HHHHHHHHHhcCCCeEEEEcCeEEEEEeCCCCHHHHHHHHHHHhhhcCCCcceEEEEeCCchhHHHHHHcccc
Q 003025 726 ELLDHLESVLANEPAAVKSGQFIVEVKPQGVSKGVVAEKIFTTMAESGRHADFVLCIGDDRSDEDMFEIIGNA 798 (856)
Q Consensus 726 el~~~L~~~l~~~~~~v~~g~~~vEI~p~gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~ 798 (856)
.....+ =-++|....|-.=++.++++. |+.|++++.|=|+....+..+.+|..
T Consensus 148 ~~y~~~-----------------gl~KPdp~iK~yHle~ll~~~---gl~peE~LFIDD~~~NVeaA~~lGi~ 200 (219)
T PTZ00445 148 SDYRPL-----------------GLDAPMPLDKSYHLKQVCSDF---NVNPDEILFIDDDMNNCKNALKEGYI 200 (219)
T ss_pred hhhhhh-----------------cccCCCccchHHHHHHHHHHc---CCCHHHeEeecCCHHHHHHHHHCCCE
Confidence 111111 113567777888889999999 99999999999999999999999863
|
|
| >PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B | Back alignment and domain information |
|---|
Probab=95.34 E-value=0.031 Score=56.46 Aligned_cols=33 Identities=21% Similarity=0.311 Sum_probs=27.9
Q ss_pred HHHHHHHHHHHhhCCCeEEEecCCChhhHHHhhc
Q 003025 614 QAVISIINTLCNDARNTVFVVSGRGRDCLGKWFS 647 (856)
Q Consensus 614 ~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~ 647 (856)
+.+.+.|+.+ ++.|..|+|+||-....++.+..
T Consensus 92 ~~~~e~i~~~-~~~~~~v~IvS~~~~~~i~~~~~ 124 (192)
T PF12710_consen 92 PDAMELIREL-KDNGIKVVIVSGSPDEIIEPIAE 124 (192)
T ss_dssp TTHHHHHHHH-HHTTSEEEEEEEEEHHHHHHHHH
T ss_pred hhHHHHHHHH-HHCCCEEEEECCCcHHHHHHHHH
Confidence 5667888886 77899999999998888888874
|
|
| >PRK11009 aphA acid phosphatase/phosphotransferase; Provisional | Back alignment and domain information |
|---|
Probab=95.33 E-value=0.031 Score=59.06 Aligned_cols=64 Identities=19% Similarity=0.284 Sum_probs=45.8
Q ss_pred cccCCHHHHHHHHHcCCcEEEEEecCCCCCCCCCC-------------------------------CCCCCHHHHHHHHH
Q 003025 574 FRKLSIDAIVSAYLRSKSRAILFDYDGTVMPQTSI-------------------------------NKAPSQAVISIINT 622 (856)
Q Consensus 574 f~~l~~~~i~~~y~~s~~rlI~~DlDGTLl~~~~~-------------------------------~~~~s~~~~~aL~~ 622 (856)
..-.++++|.+.-+..+.-.|++|+|||+++.++. ...|-+.+.+.|+.
T Consensus 46 ~~~~~~~~~~~~~~~~~p~av~~DIDeTvldnsp~~~~~~~~f~~~~~~y~~~~~fw~~y~~~~~~~a~p~~Ga~elL~~ 125 (237)
T PRK11009 46 VHWVSVAQIEKSLEGRPPMAVGFDIDDTVLFSSPGFWRGKKTFSPGSEDYLKNQKFWEKMNNGWDEFSIPKEVARQLIDM 125 (237)
T ss_pred eeEEEHHHhhhhccCCCCcEEEEECcCccccCCchheeeeeccCCCcccccChHHHHHHHHhcccccCcchHHHHHHHHH
Confidence 34478899998876666669999999999962110 00122347788888
Q ss_pred HHhhCCCeEEEecCCC
Q 003025 623 LCNDARNTVFVVSGRG 638 (856)
Q Consensus 623 L~~d~g~~V~I~TGR~ 638 (856)
| ++.|+.++++|||+
T Consensus 126 L-~~~G~~I~iVTnR~ 140 (237)
T PRK11009 126 H-VKRGDSIYFITGRT 140 (237)
T ss_pred H-HHCCCeEEEEeCCC
Confidence 6 77888999999986
|
|
| >TIGR01675 plant-AP plant acid phosphatase | Back alignment and domain information |
|---|
Probab=95.12 E-value=0.034 Score=58.15 Aligned_cols=56 Identities=16% Similarity=0.213 Sum_probs=43.3
Q ss_pred CcEEEEEecCCCCCCCCC-----------------------CCCCCCHHHHHHHHHHHhhCCCeEEEecCCChhh---HH
Q 003025 590 KSRAILFDYDGTVMPQTS-----------------------INKAPSQAVISIINTLCNDARNTVFVVSGRGRDC---LG 643 (856)
Q Consensus 590 ~~rlI~~DlDGTLl~~~~-----------------------~~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~---l~ 643 (856)
.+-+++||+|-|+++..+ ....+-+.++++++.| ++.|+.|+++|||+... ..
T Consensus 76 g~~A~V~DIDET~LsN~py~~~~~~g~~~~~~~~~~~wv~~~~apaip~al~l~~~l-~~~G~~Vf~lTGR~e~~r~~T~ 154 (229)
T TIGR01675 76 GMDAWIFDVDDTLLSNIPYYKKHGYGTEKTDPTAFWLWLGKGAAPALPEGLKLYQKI-IELGIKIFLLSGRWEELRNATL 154 (229)
T ss_pred CCcEEEEccccccccCHHHHHHhccCCCcCCHHHHHHHHHcCCCCCCHHHHHHHHHH-HHCCCEEEEEcCCChHHHHHHH
Confidence 467999999999997221 1234568899999996 88999999999999765 44
Q ss_pred Hhh
Q 003025 644 KWF 646 (856)
Q Consensus 644 ~~~ 646 (856)
+++
T Consensus 155 ~nL 157 (229)
T TIGR01675 155 DNL 157 (229)
T ss_pred HHH
Confidence 554
|
This model explicitly excludes the VSPs which lack the nucleophilc aspartate. The possibility exists, however, that some members of this family may, while containing all of the conserved HAD-superfamily catalytic residues, lack activity and have a function related to the function of the VSPs rather than the acid phosphatases. |
| >COG4087 Soluble P-type ATPase [General function prediction only] | Back alignment and domain information |
|---|
Probab=95.11 E-value=0.032 Score=52.14 Aligned_cols=54 Identities=22% Similarity=0.348 Sum_probs=42.4
Q ss_pred CCCcceEEEEeCCchhHHHHHHccccccCCCCCCCccEEEEEeCC--Cc----cccceEcCChhHHHHHHHHH
Q 003025 773 GRHADFVLCIGDDRSDEDMFEIIGNATSSGVLSSNASVFACTVGQ--KP----SKAKYYLDDAAEVVTMLEAL 839 (856)
Q Consensus 773 gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~--~~----s~A~y~l~~~~eV~~~L~~L 839 (856)
+.+.+.++++||+.||+.|++.+... -|++++ .+ -.|++++.+..+++.++...
T Consensus 90 kk~~~k~vmVGnGaND~laLr~ADlG-------------I~tiq~e~v~~r~l~~ADvvik~i~e~ldl~~~~ 149 (152)
T COG4087 90 KKRYEKVVMVGNGANDILALREADLG-------------ICTIQQEGVPERLLLTADVVLKEIAEILDLLKDT 149 (152)
T ss_pred cCCCcEEEEecCCcchHHHhhhcccc-------------eEEeccCCcchHHHhhchhhhhhHHHHHHHhhcc
Confidence 45668999999999999999999764 356664 34 45888889999888887654
|
|
| >TIGR01657 P-ATPase-V P-type ATPase of unknown pump specificity (type V) | Back alignment and domain information |
|---|
Probab=95.05 E-value=0.12 Score=66.58 Aligned_cols=47 Identities=13% Similarity=0.125 Sum_probs=37.9
Q ss_pred CCCCCHHHHHHHHHHHhhCCCeEEEecCCChhhHHHhhcCCCCccEEeeCC
Q 003025 609 NKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSPCKKLGIAAEHG 659 (856)
Q Consensus 609 ~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~~~~lgliaenG 659 (856)
...+-+++.+++++| ++.|+.++++||........... .+|++..++
T Consensus 654 ~d~lr~~~~~~I~~l-~~agi~v~miTGD~~~TA~~iA~---~~gii~~~~ 700 (1054)
T TIGR01657 654 ENPLKPDTKEVIKEL-KRASIRTVMITGDNPLTAVHVAR---ECGIVNPSN 700 (1054)
T ss_pred ecCCCccHHHHHHHH-HHCCCeEEEECCCCHHHHHHHHH---HcCCCCCCc
Confidence 345778999999996 88999999999999999999884 455654443
|
These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in. |
| >PRK10517 magnesium-transporting ATPase MgtA; Provisional | Back alignment and domain information |
|---|
Probab=95.04 E-value=0.19 Score=63.47 Aligned_cols=136 Identities=18% Similarity=0.241 Sum_probs=86.5
Q ss_pred CCCCCHHHHHHHHHHHhhCCCeEEEecCCChhhHHHhhcCCCCccEEeeCCEEEEeCCCcceEecCCCCcccHHHHHHHH
Q 003025 609 NKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSPCKKLGIAAEHGYFMRWSADEEWQNCGQSVDFGWIQIAEPV 688 (856)
Q Consensus 609 ~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~~~~lgliaenG~~I~~~~~~~w~~~~~~~~~~w~~~v~~i 688 (856)
...|-+++.+++++| ++.|++|+++||-.........+. +|+. ++..+ .
T Consensus 548 ~Dp~R~~a~~aI~~l-~~aGI~v~miTGD~~~tA~~IA~~---lGI~--~~~v~------------~------------- 596 (902)
T PRK10517 548 LDPPKETTAPALKAL-KASGVTVKILTGDSELVAAKVCHE---VGLD--AGEVL------------I------------- 596 (902)
T ss_pred hCcchhhHHHHHHHH-HHCCCEEEEEcCCCHHHHHHHHHH---cCCC--ccCce------------e-------------
Confidence 446779999999995 889999999999999999998844 4441 11000 0
Q ss_pred HHHHhhcCCcceEEecccceEEeeecCCCCCCchhHHHHHHHHHHHhcCCCeEEEEcCeEEEEEeCCCCHHHHHHHHHHH
Q 003025 689 MKLYTESTDGSYIEIKESALVWHHRDADPGFGSSQAKELLDHLESVLANEPAAVKSGQFIVEVKPQGVSKGVVAEKIFTT 768 (856)
Q Consensus 689 ~~~~~~~~~Gs~ie~k~~~l~~~~~~~dp~~~~~~a~el~~~L~~~l~~~~~~v~~g~~~vEI~p~gvsKG~al~~Ll~~ 768 (856)
|..++. .+ .+++.+.++ + ..-+-.+.|. .|-..++.+.++
T Consensus 597 ---------G~el~~-----------l~-------~~el~~~~~----~-------~~VfAr~sPe--~K~~IV~~Lq~~ 636 (902)
T PRK10517 597 ---------GSDIET-----------LS-------DDELANLAE----R-------TTLFARLTPM--HKERIVTLLKRE 636 (902)
T ss_pred ---------HHHHHh-----------CC-------HHHHHHHHh----h-------CcEEEEcCHH--HHHHHHHHHHHC
Confidence 000000 00 112222221 1 1234455564 488888887543
Q ss_pred hhhcCCCcceEEEEeCCchhHHHHHHccccccCCCCCCCccEEEEEeCCC----ccccceEc--CChhHHHHHH
Q 003025 769 MAESGRHADFVLCIGDDRSDEDMFEIIGNATSSGVLSSNASVFACTVGQK----PSKAKYYL--DDAAEVVTML 836 (856)
Q Consensus 769 l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~----~s~A~y~l--~~~~eV~~~L 836 (856)
| .-|.++||+.||.+.++.|. +++++|+. +..|+.++ ++...+.+.+
T Consensus 637 ----G---~vVam~GDGvNDaPALk~AD--------------VGIAmg~gtdvAkeaADiVLldd~~~~I~~ai 689 (902)
T PRK10517 637 ----G---HVVGFMGDGINDAPALRAAD--------------IGISVDGAVDIAREAADIILLEKSLMVLEEGV 689 (902)
T ss_pred ----C---CEEEEECCCcchHHHHHhCC--------------EEEEeCCcCHHHHHhCCEEEecCChHHHHHHH
Confidence 3 56999999999999999998 46788754 56777776 3445554444
|
|
| >PF13242 Hydrolase_like: HAD-hyrolase-like; PDB: 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A 2HX1_D 2X4D_A 3HLT_C 3L1U_B | Back alignment and domain information |
|---|
Probab=95.02 E-value=0.064 Score=45.81 Aligned_cols=59 Identities=20% Similarity=0.308 Sum_probs=45.5
Q ss_pred HHHHHHHHHHhhhcCCCcceEEEEeCC-chhHHHHHHccccccCCCCCCCccEEEEEeCCC--------ccccceEcCCh
Q 003025 759 GVVAEKIFTTMAESGRHADFVLCIGDD-RSDEDMFEIIGNATSSGVLSSNASVFACTVGQK--------PSKAKYYLDDA 829 (856)
Q Consensus 759 G~al~~Ll~~l~~~gi~~d~vlaiGD~-~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~--------~s~A~y~l~~~ 829 (856)
...++.+++.+ +++++++++|||+ .+|+.+-+.+|.. .+.|..|.. ...++|++++.
T Consensus 7 p~~~~~a~~~~---~~~~~~~~~VGD~~~~Di~~a~~~G~~-----------~ilV~tG~~~~~~~~~~~~~pd~vv~~l 72 (75)
T PF13242_consen 7 PGMLEQALKRL---GVDPSRCVMVGDSLETDIEAAKAAGID-----------TILVLTGVYSPEDLEKAEHKPDYVVDDL 72 (75)
T ss_dssp HHHHHHHHHHH---TSGGGGEEEEESSTTTHHHHHHHTTSE-----------EEEESSSSSCCCGHHHSSSTTSEEESSG
T ss_pred HHHHHHHHHHc---CCCHHHEEEEcCCcHhHHHHHHHcCCc-----------EEEECCCCCCHHHHhccCCCCCEEECCH
Confidence 34567788888 9999999999999 9999999999973 245555542 24777888876
Q ss_pred hH
Q 003025 830 AE 831 (856)
Q Consensus 830 ~e 831 (856)
.|
T Consensus 73 ~e 74 (75)
T PF13242_consen 73 KE 74 (75)
T ss_dssp GG
T ss_pred Hh
Confidence 54
|
... |
| >TIGR01652 ATPase-Plipid phospholipid-translocating P-type ATPase, flippase | Back alignment and domain information |
|---|
Probab=94.99 E-value=0.097 Score=67.38 Aligned_cols=185 Identities=14% Similarity=0.120 Sum_probs=93.9
Q ss_pred CCCCCHHHHHHHHHHHhhCCCeEEEecCCChhhHHHhhcCCCCccEEeeCCEEEEeCCCcceEecCCCCccc-HHHHHHH
Q 003025 609 NKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSPCKKLGIAAEHGYFMRWSADEEWQNCGQSVDFG-WIQIAEP 687 (856)
Q Consensus 609 ~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~~~~lgliaenG~~I~~~~~~~w~~~~~~~~~~-w~~~v~~ 687 (856)
..++-+.+.+++++| ++.|++|+++||-....+...... .+++..+.-.+...+... .+.. ....+..
T Consensus 629 eD~lq~~v~etI~~L-~~AGIkv~mlTGD~~~TA~~IA~~---~~ii~~~~~~~~i~~~~~-------~~~~~~~~~i~~ 697 (1057)
T TIGR01652 629 EDKLQEGVPETIELL-RQAGIKIWVLTGDKVETAINIGYS---CRLLSRNMEQIVITSESL-------DATRSVEAAIKF 697 (1057)
T ss_pred hhhhhhccHHHHHHH-HHCCCeEEEEcCCcHHHHHHHHHH---hCCCCCCCeEEEEecCch-------hhhHHHHHHHHH
Confidence 445677888888886 888999999999999999888743 344444332222222110 0000 0011111
Q ss_pred HHHHHhhcCCcceEEecccceEEeeecCCCCCCchhHHHHHHHHHHHhcCCCeEEEEcCeEEEEEeCCCCHHHHHHHHHH
Q 003025 688 VMKLYTESTDGSYIEIKESALVWHHRDADPGFGSSQAKELLDHLESVLANEPAAVKSGQFIVEVKPQGVSKGVVAEKIFT 767 (856)
Q Consensus 688 i~~~~~~~~~Gs~ie~k~~~l~~~~~~~dp~~~~~~a~el~~~L~~~l~~~~~~v~~g~~~vEI~p~gvsKG~al~~Ll~ 767 (856)
.......... .....+...+...-. .+......++.+++.+.+...... -+-.+.|. .|+..++.+-+
T Consensus 698 ~~~~~~~~~~-~~~~~~~~~lvi~G~----~l~~~l~~~~~~~f~~l~~~~~~v-----V~aR~sP~--qK~~IV~~lk~ 765 (1057)
T TIGR01652 698 GLEGTSEEFN-NLGDSGNVALVIDGK----SLGYALDEELEKEFLQLALKCKAV-----ICCRVSPS--QKADVVRLVKK 765 (1057)
T ss_pred HHHHHHHhhh-hhccCCceEEEEccH----HHHHHHhhHHHHHHHHHHhhCCEE-----EEeCCCHH--HHHHHHHHHHh
Confidence 1110000000 000011111111100 000000011222333333222111 23344554 59999988865
Q ss_pred HhhhcCCCcceEEEEeCCchhHHHHHHccccccCCCCCCCccEEEEEe-CC----CccccceEcCChhHHHHHH
Q 003025 768 TMAESGRHADFVLCIGDDRSDEDMFEIIGNATSSGVLSSNASVFACTV-GQ----KPSKAKYYLDDAAEVVTML 836 (856)
Q Consensus 768 ~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~v-G~----~~s~A~y~l~~~~eV~~~L 836 (856)
.. -.-|+++||+.||.+|++.|.. +|.+ |. +...|+|.+.+-..+.++|
T Consensus 766 ~~------~~~vl~iGDG~ND~~mlk~AdV--------------GIgi~g~eg~qA~~aaD~~i~~F~~L~~ll 819 (1057)
T TIGR01652 766 ST------GKTTLAIGDGANDVSMIQEADV--------------GVGISGKEGMQAVMASDFAIGQFRFLTKLL 819 (1057)
T ss_pred cC------CCeEEEEeCCCccHHHHhhcCe--------------eeEecChHHHHHHHhhhhhhhhHHHHHHHH
Confidence 42 2469999999999999999985 4443 32 3456888887755555554
|
This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes. |
| >KOG1615 consensus Phosphoserine phosphatase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=94.99 E-value=0.028 Score=56.07 Aligned_cols=35 Identities=14% Similarity=0.187 Sum_probs=30.1
Q ss_pred CHHHHHHHHHHHhhhcCCCcceEEEEeCCchhHHHHHHcc
Q 003025 757 SKGVVAEKIFTTMAESGRHADFVLCIGDDRSDEDMFEIIG 796 (856)
Q Consensus 757 sKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag 796 (856)
.|+.++..+.+ +.+...++++||+.||++|..-+.
T Consensus 159 gKa~~i~~lrk-----~~~~~~~~mvGDGatDlea~~pa~ 193 (227)
T KOG1615|consen 159 GKAEVIALLRK-----NYNYKTIVMVGDGATDLEAMPPAD 193 (227)
T ss_pred ccHHHHHHHHh-----CCChheeEEecCCccccccCCchh
Confidence 59999999888 567889999999999999887744
|
|
| >PRK15122 magnesium-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=94.93 E-value=0.24 Score=62.56 Aligned_cols=137 Identities=18% Similarity=0.214 Sum_probs=87.9
Q ss_pred CCCCCHHHHHHHHHHHhhCCCeEEEecCCChhhHHHhhcCCCCccEEeeCCEEEEeCCCcceEecCCCCcccHHHHHHHH
Q 003025 609 NKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSPCKKLGIAAEHGYFMRWSADEEWQNCGQSVDFGWIQIAEPV 688 (856)
Q Consensus 609 ~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~~~~lgliaenG~~I~~~~~~~w~~~~~~~~~~w~~~v~~i 688 (856)
...+-+++.+++++| ++.|+.|+++||-.......+.+. +|+. .+..+
T Consensus 548 ~Dp~R~~a~~aI~~l-~~aGI~v~miTGD~~~tA~aIA~~---lGI~--~~~vi-------------------------- 595 (903)
T PRK15122 548 LDPPKESAAPAIAAL-RENGVAVKVLTGDNPIVTAKICRE---VGLE--PGEPL-------------------------- 595 (903)
T ss_pred cCccHHHHHHHHHHH-HHCCCeEEEECCCCHHHHHHHHHH---cCCC--CCCcc--------------------------
Confidence 446779999999995 999999999999999999998844 4442 11000
Q ss_pred HHHHhhcCCcceEEecccceEEeeecCCCCCCchhHHHHHHHHHHHhcCCCeEEEEcCeEEEEEeCCCCHHHHHHHHHHH
Q 003025 689 MKLYTESTDGSYIEIKESALVWHHRDADPGFGSSQAKELLDHLESVLANEPAAVKSGQFIVEVKPQGVSKGVVAEKIFTT 768 (856)
Q Consensus 689 ~~~~~~~~~Gs~ie~k~~~l~~~~~~~dp~~~~~~a~el~~~L~~~l~~~~~~v~~g~~~vEI~p~gvsKG~al~~Ll~~ 768 (856)
.|..++. .+ .+++.+.+ .+ -.-+-.+.|. .|-..++.+.++
T Consensus 596 --------~G~el~~-----------~~-------~~el~~~v----~~-------~~VfAr~sPe--~K~~iV~~Lq~~ 636 (903)
T PRK15122 596 --------LGTEIEA-----------MD-------DAALAREV----EE-------RTVFAKLTPL--QKSRVLKALQAN 636 (903)
T ss_pred --------chHhhhh-----------CC-------HHHHHHHh----hh-------CCEEEEeCHH--HHHHHHHHHHhC
Confidence 0100000 00 11222222 11 1234456664 488888887553
Q ss_pred hhhcCCCcceEEEEeCCchhHHHHHHccccccCCCCCCCccEEEEEeCCC----ccccceEc--CChhHHHHHHH
Q 003025 769 MAESGRHADFVLCIGDDRSDEDMFEIIGNATSSGVLSSNASVFACTVGQK----PSKAKYYL--DDAAEVVTMLE 837 (856)
Q Consensus 769 l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~----~s~A~y~l--~~~~eV~~~L~ 837 (856)
| .-|.++||+.||.++++.|. +++++|+. +..|+.++ ++...+.+.++
T Consensus 637 ----G---~vVamtGDGvNDaPALk~AD--------------VGIAmg~gtdvAkeaADiVLldd~f~~Iv~ai~ 690 (903)
T PRK15122 637 ----G---HTVGFLGDGINDAPALRDAD--------------VGISVDSGADIAKESADIILLEKSLMVLEEGVI 690 (903)
T ss_pred ----C---CEEEEECCCchhHHHHHhCC--------------EEEEeCcccHHHHHhcCEEEecCChHHHHHHHH
Confidence 3 56999999999999999998 46888753 57788877 34555554443
|
|
| >PF08323 Glyco_transf_5: Starch synthase catalytic domain; InterPro: IPR013534 This region represents the catalytic domain of glycogen (or starch) synthases that use ADP-glucose (2 | Back alignment and domain information |
|---|
Probab=94.89 E-value=0.098 Score=55.68 Aligned_cols=85 Identities=25% Similarity=0.501 Sum_probs=56.7
Q ss_pred HHHHHHHHHcCC---CCCEEEEeCcccchHHHHHHhhcC------CCeEEEEEccC-C----CChHHHh--cCCch----
Q 003025 188 IFSQRVIEVINP---EDDYVWIHDYHLMVLPTFLRRRFT------RLRMGFFLHSP-F----PSSEIYR--TLPVR---- 247 (856)
Q Consensus 188 ~fa~~i~~~~~~---~~D~VwihDyhl~llp~~lr~~~~------~~~i~~flH~P-f----P~~e~~~--~lp~r---- 247 (856)
.|+.++++.++. ..|+|++||+|-.++|.+|+.... ++|+.|.+|-. | |. +.+. -+|+.
T Consensus 118 ~fs~a~le~~~~l~~~pDIIH~hDW~tal~p~~lk~~~~~~~~~~~~~~v~TIHN~~yqg~~~~-~~~~~~gl~~~~~~~ 196 (245)
T PF08323_consen 118 FFSRAALELLKKLGWKPDIIHCHDWHTALAPLYLKERYQQDPFFANIPTVFTIHNLEYQGIFPP-EDLKALGLPDEYFQN 196 (245)
T ss_dssp HHHHHHHHHHCTCT-S-SEEEEECGGGTTHHHHHHHCCSS------SEEEEEESSTT---EEEG-GGGGCTT-GGGGS-S
T ss_pred HHHHHHHHHHHhhCCCCCEEEecCchHHHHHHHhccccccccccccceeEEEEcccccCCcCCH-HHHHHcCCCHHHhcc
Confidence 444444444321 239999999999999999998763 69999999953 2 22 1211 13321
Q ss_pred ----------HHHHHHhHhCCEEcccCHHHHHHHHH
Q 003025 248 ----------EEILKALLNADLIGFHTFDYARHFLS 273 (856)
Q Consensus 248 ----------~eil~~ll~~dligf~t~~~~~~Fl~ 273 (856)
.-+--|+..||.|-.-++.|++.-++
T Consensus 197 ~~~~~~~~~in~lk~gi~~AD~v~TVS~~Ya~Ei~~ 232 (245)
T PF08323_consen 197 LDEYEFYGQINFLKAGIVYADKVTTVSPTYAREIQT 232 (245)
T ss_dssp TTTTEETTEEEHHHHHHHHSSEEEESSHHHHHHTTS
T ss_pred ccccccccccCHHHHHHHhcCEeeeCCHHHHHHHhC
Confidence 23455799999999999999887654
|
4.1.21 from EC), rather than UDP-glucose (2.4.1.11 from EC) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate.; PDB: 2BIS_C 3L01_A 3FRO_A 2R4U_A 2R4T_A 3D1J_A 3COP_A 3GUH_A 2QZS_A 3CX4_A .... |
| >TIGR01647 ATPase-IIIA_H plasma-membrane proton-efflux P-type ATPase | Back alignment and domain information |
|---|
Probab=94.75 E-value=0.29 Score=60.66 Aligned_cols=167 Identities=19% Similarity=0.201 Sum_probs=100.3
Q ss_pred HHHHcCCcEEEEEec---CC--CCCCCCCCCCCCCHHHHHHHHHHHhhCCCeEEEecCCChhhHHHhhcCCCCccEEeeC
Q 003025 584 SAYLRSKSRAILFDY---DG--TVMPQTSINKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSPCKKLGIAAEH 658 (856)
Q Consensus 584 ~~y~~s~~rlI~~Dl---DG--TLl~~~~~~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~~~~lgliaen 658 (856)
+.+.....|.+++=+ ++ +++..-.-...|-+++.+++++| ++.|++|+++||........+.++ +|+..
T Consensus 410 ~~~~~~G~rvl~vA~~~~e~~l~~~Gli~l~Dp~R~~a~~aI~~l-~~aGI~v~miTGD~~~tA~~IA~~---lGI~~-- 483 (755)
T TIGR01647 410 DELASRGYRALGVARTDEEGRWHFLGLLPLFDPPRHDTKETIERA-RHLGVEVKMVTGDHLAIAKETARR---LGLGT-- 483 (755)
T ss_pred HHHHhCCCEEEEEEEEcCCCCcEEEEEeeccCCChhhHHHHHHHH-HHCCCeEEEECCCCHHHHHHHHHH---cCCCC--
Confidence 334445567777655 33 44432113556789999999995 899999999999999999999854 44421
Q ss_pred CEEEEeCCCcceEecCCCCcccHHHHHHHHHHHHhhcCCcceEEecccceEEeeecCCCCCCchhHHHHHHHHHHHhcCC
Q 003025 659 GYFMRWSADEEWQNCGQSVDFGWIQIAEPVMKLYTESTDGSYIEIKESALVWHHRDADPGFGSSQAKELLDHLESVLANE 738 (856)
Q Consensus 659 G~~I~~~~~~~w~~~~~~~~~~w~~~v~~i~~~~~~~~~Gs~ie~k~~~l~~~~~~~dp~~~~~~a~el~~~L~~~l~~~ 738 (856)
. +. .+. .+ . .|.. .... ..+++.+.+++ .
T Consensus 484 ~--~~-~~~----------------~l-------~---~~~~-----------~~~~-------~~~~~~~~~~~----~ 512 (755)
T TIGR01647 484 N--IY-TAD----------------VL-------L---KGDN-----------RDDL-------PSGELGEMVED----A 512 (755)
T ss_pred C--Cc-CHH----------------Hh-------c---CCcc-----------hhhC-------CHHHHHHHHHh----C
Confidence 0 00 000 00 0 0100 0000 01223332221 1
Q ss_pred CeEEEEcCeEEEEEeCCCCHHHHHHHHHHHhhhcCCCcceEEEEeCCchhHHHHHHccccccCCCCCCCccEEEEEeCCC
Q 003025 739 PAAVKSGQFIVEVKPQGVSKGVVAEKIFTTMAESGRHADFVLCIGDDRSDEDMFEIIGNATSSGVLSSNASVFACTVGQK 818 (856)
Q Consensus 739 ~~~v~~g~~~vEI~p~gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~ 818 (856)
.-+-++.|. .|-..++.+.++ | .-|.++||+.||.+.++.|.. ++++|+.
T Consensus 513 -------~vfAr~~Pe--~K~~iV~~lq~~----G---~~VamvGDGvNDapAL~~AdV--------------GIAm~~g 562 (755)
T TIGR01647 513 -------DGFAEVFPE--HKYEIVEILQKR----G---HLVGMTGDGVNDAPALKKADV--------------GIAVAGA 562 (755)
T ss_pred -------CEEEecCHH--HHHHHHHHHHhc----C---CEEEEEcCCcccHHHHHhCCe--------------eEEecCC
Confidence 234556675 488888887543 3 569999999999999999984 6777753
Q ss_pred ----ccccceEc--CChhHHHHHHH
Q 003025 819 ----PSKAKYYL--DDAAEVVTMLE 837 (856)
Q Consensus 819 ----~s~A~y~l--~~~~eV~~~L~ 837 (856)
+..|+.++ ++...+...++
T Consensus 563 tdvAkeaADivLl~d~l~~I~~ai~ 587 (755)
T TIGR01647 563 TDAARSAADIVLTEPGLSVIVDAIL 587 (755)
T ss_pred cHHHHHhCCEEEEcCChHHHHHHHH
Confidence 56677776 34555555443
|
This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast. |
| >TIGR01524 ATPase-IIIB_Mg magnesium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=94.74 E-value=0.24 Score=62.40 Aligned_cols=137 Identities=18% Similarity=0.206 Sum_probs=85.9
Q ss_pred CCCCCHHHHHHHHHHHhhCCCeEEEecCCChhhHHHhhcCCCCccEEeeCCEEEEeCCCcceEecCCCCcccHHHHHHHH
Q 003025 609 NKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSPCKKLGIAAEHGYFMRWSADEEWQNCGQSVDFGWIQIAEPV 688 (856)
Q Consensus 609 ~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~~~~lgliaenG~~I~~~~~~~w~~~~~~~~~~w~~~v~~i 688 (856)
...+-+++.+++++| ++.|++++++||-.........+. +|+.. +-.+ .
T Consensus 513 ~Dp~R~~~~~aI~~l-~~aGI~vvmiTGD~~~tA~aIA~~---lGI~~--~~v~------------~------------- 561 (867)
T TIGR01524 513 LDPPKESTKEAIAAL-FKNGINVKVLTGDNEIVTARICQE---VGIDA--NDFL------------L------------- 561 (867)
T ss_pred eCCCchhHHHHHHHH-HHCCCEEEEEcCCCHHHHHHHHHH---cCCCC--CCee------------e-------------
Confidence 346779999999995 999999999999999999888843 44421 0000 0
Q ss_pred HHHHhhcCCcceEEecccceEEeeecCCCCCCchhHHHHHHHHHHHhcCCCeEEEEcCeEEEEEeCCCCHHHHHHHHHHH
Q 003025 689 MKLYTESTDGSYIEIKESALVWHHRDADPGFGSSQAKELLDHLESVLANEPAAVKSGQFIVEVKPQGVSKGVVAEKIFTT 768 (856)
Q Consensus 689 ~~~~~~~~~Gs~ie~k~~~l~~~~~~~dp~~~~~~a~el~~~L~~~l~~~~~~v~~g~~~vEI~p~gvsKG~al~~Ll~~ 768 (856)
|..++. .+ .+++.+.+ .+ -.-+-.+.|. .|-..++.+.++
T Consensus 562 ---------g~~l~~-----------~~-------~~el~~~~----~~-------~~vfAr~~Pe--~K~~iV~~lq~~ 601 (867)
T TIGR01524 562 ---------GADIEE-----------LS-------DEELAREL----RK-------YHIFARLTPM--QKSRIIGLLKKA 601 (867)
T ss_pred ---------cHhhhh-----------CC-------HHHHHHHh----hh-------CeEEEECCHH--HHHHHHHHHHhC
Confidence 000000 00 01222221 11 1123445554 488888887543
Q ss_pred hhhcCCCcceEEEEeCCchhHHHHHHccccccCCCCCCCccEEEEEeCCC----ccccceEc--CChhHHHHHHH
Q 003025 769 MAESGRHADFVLCIGDDRSDEDMFEIIGNATSSGVLSSNASVFACTVGQK----PSKAKYYL--DDAAEVVTMLE 837 (856)
Q Consensus 769 l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~----~s~A~y~l--~~~~eV~~~L~ 837 (856)
| .-|.++||+.||.++++.|+. ++++|+. +..|+.++ ++...+...++
T Consensus 602 ----G---~vVam~GDGvNDapALk~AdV--------------GIAmg~gtdvAk~aADiVLldd~~~~I~~ai~ 655 (867)
T TIGR01524 602 ----G---HTVGFLGDGINDAPALRKADV--------------GISVDTAADIAKEASDIILLEKSLMVLEEGVI 655 (867)
T ss_pred ----C---CEEEEECCCcccHHHHHhCCE--------------EEEeCCccHHHHHhCCEEEecCChHHHHHHHH
Confidence 3 469999999999999999984 6788753 56777776 34455544443
|
The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis. |
| >COG0763 LpxB Lipid A disaccharide synthetase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=94.48 E-value=1.4 Score=49.18 Aligned_cols=276 Identities=14% Similarity=0.160 Sum_probs=142.1
Q ss_pred HhHHHHHHHHHHHHHHHHHHcCCCCCEEEEeCccc--chHHHHHHhhcCCCeEEEEEccCCCChHHHhcCCchHHHHHHh
Q 003025 177 SLWEAYVSANKIFSQRVIEVINPEDDYVWIHDYHL--MVLPTFLRRRFTRLRMGFFLHSPFPSSEIYRTLPVREEILKAL 254 (856)
Q Consensus 177 ~~w~~Y~~vN~~fa~~i~~~~~~~~D~VwihDyhl--~llp~~lr~~~~~~~i~~flH~PfP~~e~~~~lp~r~eil~~l 254 (856)
..|..|++.=+.+ .+ -+| |++..=|+-= ..+...||+..|++||..+.- | .+|.=-|.|-..+..
T Consensus 69 ~llk~~~~~~~~i----~~-~kp--D~~i~IDsPdFnl~vak~lrk~~p~i~iihYV~---P--sVWAWr~~Ra~~i~~- 135 (381)
T COG0763 69 RLLKIRRELVRYI----LA-NKP--DVLILIDSPDFNLRVAKKLRKAGPKIKIIHYVS---P--SVWAWRPKRAVKIAK- 135 (381)
T ss_pred HHHHHHHHHHHHH----Hh-cCC--CEEEEeCCCCCchHHHHHHHHhCCCCCeEEEEC---c--ceeeechhhHHHHHH-
Confidence 4566655443333 22 255 7777767652 356789999999999987764 3 444322666333333
Q ss_pred HhCCEEcccCHHHHHHHHHHHHhhhCceecccCceeeEEECCEEEEEEEeecccCchHHHHHhcCchHHHHHHHHHHHc-
Q 003025 255 LNADLIGFHTFDYARHFLSCCSRMLGLEYQSKRGYIGLEYYGRTVGIKIMPVGIHMGQIESVLRLADKDWRVQELKQQF- 333 (856)
Q Consensus 255 l~~dligf~t~~~~~~Fl~~~~r~lg~~~~~~~~~~~~~~~gr~~~i~i~p~GId~~~~~~~~~~~~~~~~~~~l~~~~- 333 (856)
.+|++.--.+ +-..|.+. .|+. ..|-|+.. .|.-.+. + .....|+++
T Consensus 136 -~~D~lLailP-FE~~~y~k----~g~~---------~~yVGHpl--------~d~i~~~-----~----~r~~ar~~l~ 183 (381)
T COG0763 136 -YVDHLLAILP-FEPAFYDK----FGLP---------CTYVGHPL--------ADEIPLL-----P----DREAAREKLG 183 (381)
T ss_pred -HhhHeeeecC-CCHHHHHh----cCCC---------eEEeCChh--------hhhcccc-----c----cHHHHHHHhC
Confidence 2454431111 11122210 0111 22333321 1111111 1 112244444
Q ss_pred ---CCCeEEEecc--CccccCCHHHHHHHHHHHHHhCCCCcCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCC
Q 003025 334 ---EGKTVLLGVD--DMDIFKGVDLKLLAMEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGR 408 (856)
Q Consensus 334 ---~~k~iil~Vd--Rld~~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~~~~lv~~IN~~~~~ 408 (856)
..+.+.+-.| |=+...-.+-.++|++++.+++|+.+ ++.-..+ ..++.++.+ ..+.-.
T Consensus 184 ~~~~~~~lalLPGSR~sEI~rl~~~f~~a~~~l~~~~~~~~----~vlp~~~-----~~~~~~~~~---~~~~~~----- 246 (381)
T COG0763 184 IDADEKTLALLPGSRRSEIRRLLPPFVQAAQELKARYPDLK----FVLPLVN-----AKYRRIIEE---ALKWEV----- 246 (381)
T ss_pred CCCCCCeEEEecCCcHHHHHHHHHHHHHHHHHHHhhCCCce----EEEecCc-----HHHHHHHHH---Hhhccc-----
Confidence 3444444433 34455667778899999999999987 4433322 233333332 211111
Q ss_pred CCcccEEEEcCCCCHHHHHHHHHhcceeeeccccccCCCcccceeeeecCCCCCCCCCCCCCCCCceEEec---------
Q 003025 409 PGYEPVVFIDKPVTLSERAAYYTIAECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVS--------- 479 (856)
Q Consensus 409 ~~~~pvv~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~g~lV~S--------- 479 (856)
..+.+++. ..+....+.+||+.+..| |.+.+|++.|+. |.|++
T Consensus 247 --~~~~~~~~----~~~~~~a~~~aD~al~aS-----GT~tLE~aL~g~-----------------P~Vv~Yk~~~it~~ 298 (381)
T COG0763 247 --AGLSLILI----DGEKRKAFAAADAALAAS-----GTATLEAALAGT-----------------PMVVAYKVKPITYF 298 (381)
T ss_pred --cCceEEec----CchHHHHHHHhhHHHHhc-----cHHHHHHHHhCC-----------------CEEEEEeccHHHHH
Confidence 01222222 356788899999999998 799999999954 44433
Q ss_pred --------CCcccccccCCceee-----CCCCHHHHHHHHHHHHcCCH--HHHHHHHHHHhhhhhcCCHHHHHHHHHH
Q 003025 480 --------EFIGCSPSLSGAIRV-----NPWNIEATAEAMHEAIQMNE--AEKQLRHEKHYRYVSTHDVAYWARSFFQ 542 (856)
Q Consensus 480 --------e~~G~~~~l~~al~V-----nP~d~~~~A~ai~~aL~m~~--~er~~r~~~~~~~v~~~~~~~W~~~~l~ 542 (856)
.+.+....+.|-.+| .-..++.+|+++...+..+. ++..+..+.+++++.+..+..-+.+.+-
T Consensus 299 iak~lvk~~yisLpNIi~~~~ivPEliq~~~~pe~la~~l~~ll~~~~~~~~~~~~~~~l~~~l~~~~~~e~aA~~vl 376 (381)
T COG0763 299 IAKRLVKLPYVSLPNILAGREIVPELIQEDCTPENLARALEELLLNGDRREALKEKFRELHQYLREDPASEIAAQAVL 376 (381)
T ss_pred HHHHhccCCcccchHHhcCCccchHHHhhhcCHHHHHHHHHHHhcChHhHHHHHHHHHHHHHHHcCCcHHHHHHHHHH
Confidence 233333333332222 12347899999999997552 2223334445555555534444444433
|
|
| >PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases | Back alignment and domain information |
|---|
Probab=94.46 E-value=0.064 Score=53.39 Aligned_cols=50 Identities=22% Similarity=0.411 Sum_probs=37.6
Q ss_pred cccccCCHHHHHHHHHcCCcEEEEEecCCCCCCCCCCCCCCCHHHHHHHHHHHhh
Q 003025 572 PNFRKLSIDAIVSAYLRSKSRAILFDYDGTVMPQTSINKAPSQAVISIINTLCND 626 (856)
Q Consensus 572 ~~f~~l~~~~i~~~y~~s~~rlI~~DlDGTLl~~~~~~~~~s~~~~~aL~~L~~d 626 (856)
++|..++.+.- ..++..+|.++||.|.||+.. ....++++..+.++++ ++
T Consensus 24 ~si~~I~~~~~--~Lk~~Gik~li~DkDNTL~~~--~~~~i~~~~~~~~~~l-~~ 73 (168)
T PF09419_consen 24 PSIRDIDFEAN--HLKKKGIKALIFDKDNTLTPP--YEDEIPPEYAEWLNEL-KK 73 (168)
T ss_pred CChhhCCcchh--hhhhcCceEEEEcCCCCCCCC--CcCcCCHHHHHHHHHH-HH
Confidence 45556665521 146678999999999999963 5678899999999996 53
|
All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family. |
| >TIGR01523 ATPase-IID_K-Na potassium and/or sodium efflux P-type ATPase, fungal-type | Back alignment and domain information |
|---|
Probab=94.42 E-value=0.14 Score=65.68 Aligned_cols=148 Identities=18% Similarity=0.220 Sum_probs=88.0
Q ss_pred CCCCCHHHHHHHHHHHhhCCCeEEEecCCChhhHHHhhcCCCCccEEeeCCEEEEeCCCcceEecCCCCcccHHHHHHHH
Q 003025 609 NKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSPCKKLGIAAEHGYFMRWSADEEWQNCGQSVDFGWIQIAEPV 688 (856)
Q Consensus 609 ~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~~~~lgliaenG~~I~~~~~~~w~~~~~~~~~~w~~~v~~i 688 (856)
...+-+++.++++++ ++.|++|+++||........+.. .+|+...+... . ....
T Consensus 644 ~Dp~r~~v~~aI~~l-~~aGIkv~MiTGD~~~tA~~iA~---~~Gi~~~~~~~--~-~~~~------------------- 697 (1053)
T TIGR01523 644 YDPPRNESAGAVEKC-HQAGINVHMLTGDFPETAKAIAQ---EVGIIPPNFIH--D-RDEI------------------- 697 (1053)
T ss_pred ecCCchhHHHHHHHH-HHCCCEEEEECCCCHHHHHHHHH---HcCCCCccccc--c-cccc-------------------
Confidence 456779999999995 99999999999999999999984 45554332110 0 0000
Q ss_pred HHHHhhcCCcceEEecccceEEeeecCCCCCCchhHHHHHHHHHHHhcCCCeEEEEcCeEEEEEeCCCCHHHHHHHHHHH
Q 003025 689 MKLYTESTDGSYIEIKESALVWHHRDADPGFGSSQAKELLDHLESVLANEPAAVKSGQFIVEVKPQGVSKGVVAEKIFTT 768 (856)
Q Consensus 689 ~~~~~~~~~Gs~ie~k~~~l~~~~~~~dp~~~~~~a~el~~~L~~~l~~~~~~v~~g~~~vEI~p~gvsKG~al~~Ll~~ 768 (856)
.. .....|..++ ....+++.+ .... . .-+-.+.|. .|...++.+.+.
T Consensus 698 ~~--~~vitG~~l~------------------~l~~~~l~~----~~~~--~-----~V~ar~sP~--~K~~iV~~lq~~ 744 (1053)
T TIGR01523 698 MD--SMVMTGSQFD------------------ALSDEEVDD----LKAL--C-----LVIARCAPQ--TKVKMIEALHRR 744 (1053)
T ss_pred cc--ceeeehHHhh------------------hcCHHHHHH----Hhhc--C-----eEEEecCHH--HHHHHHHHHHhc
Confidence 00 0000010000 000112221 1111 1 123334453 488888887653
Q ss_pred hhhcCCCcceEEEEeCCchhHHHHHHccccccCCCCCCCccEEEEEeCC-C----ccccceEcC--ChhHHHHHH
Q 003025 769 MAESGRHADFVLCIGDDRSDEDMFEIIGNATSSGVLSSNASVFACTVGQ-K----PSKAKYYLD--DAAEVVTML 836 (856)
Q Consensus 769 l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~-~----~s~A~y~l~--~~~eV~~~L 836 (856)
| .-|.++||+.||.+|++.|+. +|++|. . +..|++++. +...+.+++
T Consensus 745 ----g---~~Vam~GDGvNDapaLk~AdV--------------GIAmg~~gt~vak~aADivl~dd~f~~I~~~i 798 (1053)
T TIGR01523 745 ----K---AFCAMTGDGVNDSPSLKMANV--------------GIAMGINGSDVAKDASDIVLSDDNFASILNAI 798 (1053)
T ss_pred ----C---CeeEEeCCCcchHHHHHhCCc--------------cEecCCCccHHHHHhcCEEEecCCHHHHHHHH
Confidence 2 468999999999999999984 677873 2 467888874 455555554
|
The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump. |
| >PRK13582 thrH phosphoserine phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=94.29 E-value=0.083 Score=54.20 Aligned_cols=53 Identities=11% Similarity=0.165 Sum_probs=39.4
Q ss_pred CcceEEEEeCCchhHHHHHHccccccCCCCCCCccEEEEEeCCC----ccccce-EcCChhHHHHHHHHHHH
Q 003025 775 HADFVLCIGDDRSDEDMFEIIGNATSSGVLSSNASVFACTVGQK----PSKAKY-YLDDAAEVVTMLEALAE 841 (856)
Q Consensus 775 ~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~----~s~A~y-~l~~~~eV~~~L~~L~~ 841 (856)
.++++++|||+.||++|.++++.. |.++.. ...+.+ .+++..++.+.|.....
T Consensus 143 ~~~~~v~iGDs~~D~~~~~aa~~~--------------v~~~~~~~~~~~~~~~~~~~~~~el~~~l~~~~~ 200 (205)
T PRK13582 143 LGYRVIAAGDSYNDTTMLGEADAG--------------ILFRPPANVIAEFPQFPAVHTYDELLAAIDKASA 200 (205)
T ss_pred hCCeEEEEeCCHHHHHHHHhCCCC--------------EEECCCHHHHHhCCcccccCCHHHHHHHHHHHHh
Confidence 457899999999999999999852 444443 123454 67899998888877654
|
|
| >PF08645 PNK3P: Polynucleotide kinase 3 phosphatase; InterPro: IPR013954 Polynucleotide kinase 3 phosphatases play a role in the repair of single breaks in DNA induced by DNA-damaging agents such as gamma radiation and camptothecin [] | Back alignment and domain information |
|---|
Probab=94.17 E-value=0.036 Score=54.88 Aligned_cols=44 Identities=23% Similarity=0.368 Sum_probs=31.2
Q ss_pred EEEEEecCCCCCCCCCCCC--------C-CCHHHHHHHHHHHhhCCCeEEEecC
Q 003025 592 RAILFDYDGTVMPQTSINK--------A-PSQAVISIINTLCNDARNTVFVVSG 636 (856)
Q Consensus 592 rlI~~DlDGTLl~~~~~~~--------~-~s~~~~~aL~~L~~d~g~~V~I~TG 636 (856)
|+.+||+||||+...+... . ..+.+.++|++| .+.|..++|+|-
T Consensus 1 Kia~fD~DgTLi~~~s~~~f~~~~~D~~~~~~~v~~~L~~l-~~~Gy~IvIvTN 53 (159)
T PF08645_consen 1 KIAFFDLDGTLIKTKSGKKFPKDPDDWKFFPPGVPEALREL-HKKGYKIVIVTN 53 (159)
T ss_dssp SEEEE-SCTTTEE-STSTTS-SSTCGGEEC-TTHHHHHHHH-HHTTEEEEEEEE
T ss_pred CEEEEeCCCCccCCCCCCcCcCCHHHhhhcchhHHHHHHHH-HhcCCeEEEEeC
Confidence 6899999999997433111 1 245799999998 778999998884
|
; PDB: 2FPW_A 2FPR_A 2FPX_A 2FPS_A 2FPU_B 3ZVM_A 1YJ5_A 3ZVL_A 3U7E_B 3U7G_A .... |
| >TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490 | Back alignment and domain information |
|---|
Probab=94.16 E-value=0.051 Score=55.65 Aligned_cols=42 Identities=17% Similarity=0.242 Sum_probs=37.6
Q ss_pred CCCCHHHHHHHHHHHhhhcCCCcceEEEEeCCchhHHHHHHcccc
Q 003025 754 QGVSKGVVAEKIFTTMAESGRHADFVLCIGDDRSDEDMFEIIGNA 798 (856)
Q Consensus 754 ~gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~ 798 (856)
.+-.|...++.++++. +++++.++++|||.+|++|++.+|..
T Consensus 152 ~g~~K~~~l~~~~~~~---~~~~~~~~~~gDs~~D~~~~~~a~~~ 193 (202)
T TIGR01490 152 KGEGKVHALAELLAEE---QIDLKDSYAYGDSISDLPLLSLVGHP 193 (202)
T ss_pred CChHHHHHHHHHHHHc---CCCHHHcEeeeCCcccHHHHHhCCCc
Confidence 4567888899999888 89999999999999999999999964
|
A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog. |
| >TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein | Back alignment and domain information |
|---|
Probab=94.15 E-value=0.081 Score=54.64 Aligned_cols=64 Identities=9% Similarity=0.004 Sum_probs=44.7
Q ss_pred CCCHHHHHHHHHHHhhhcCCCcceEEEEeCCchhHHHHHHccccccCCCCCCCccEEEEEeCCCcc---ccce--EcCCh
Q 003025 755 GVSKGVVAEKIFTTMAESGRHADFVLCIGDDRSDEDMFEIIGNATSSGVLSSNASVFACTVGQKPS---KAKY--YLDDA 829 (856)
Q Consensus 755 gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~~s---~A~y--~l~~~ 829 (856)
+-.|...++.+ +.. + .+++++||+.||++|++.++. +|++..++. .|+- .+.+.
T Consensus 130 ~~~K~~~l~~l-~~~---~---~~~v~vGDs~nDl~ml~~Ag~--------------~ia~~ak~~~~~~~~~~~~~~~~ 188 (203)
T TIGR02137 130 KDPKRQSVIAF-KSL---Y---YRVIAAGDSYNDTTMLSEAHA--------------GILFHAPENVIREFPQFPAVHTY 188 (203)
T ss_pred cchHHHHHHHH-Hhh---C---CCEEEEeCCHHHHHHHHhCCC--------------CEEecCCHHHHHhCCCCCcccCH
Confidence 44688888887 343 4 379999999999999999986 477766642 2222 23566
Q ss_pred hHHHHHHHHH
Q 003025 830 AEVVTMLEAL 839 (856)
Q Consensus 830 ~eV~~~L~~L 839 (856)
++++..+..-
T Consensus 189 ~~~~~~~~~~ 198 (203)
T TIGR02137 189 EDLKREFLKA 198 (203)
T ss_pred HHHHHHHHHH
Confidence 7776666554
|
This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338). |
| >TIGR01494 ATPase_P-type ATPase, P-type (transporting), HAD superfamily, subfamily IC | Back alignment and domain information |
|---|
Probab=94.04 E-value=0.25 Score=58.32 Aligned_cols=59 Identities=12% Similarity=0.087 Sum_probs=40.5
Q ss_pred CcEEEEEecCCCCCCCCCCCCCCCHHHHHHHHHHHhhCCCeEEEecCCChhhHHHhhcCC
Q 003025 590 KSRAILFDYDGTVMPQTSINKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSPC 649 (856)
Q Consensus 590 ~~rlI~~DlDGTLl~~~~~~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~~ 649 (856)
..+.+++=+|++++..-.....+-+.+.++++.| ++.|+.++++||............+
T Consensus 326 g~~~~~~a~~~~~~g~i~l~d~lr~~~~~~i~~l-~~~gi~~~~ltGD~~~~a~~ia~~l 384 (499)
T TIGR01494 326 GLRVLAVASKETLLGLLGLEDPLRDDAKETISEL-REAGIRVIMLTGDNVLTAKAIAKEL 384 (499)
T ss_pred CCEEEEEEECCeEEEEEEecCCCchhHHHHHHHH-HHCCCeEEEEcCCCHHHHHHHHHHc
Confidence 3444444455555531113445667888888886 6689999999999999988887543
|
The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily. |
| >PF02684 LpxB: Lipid-A-disaccharide synthetase; InterPro: IPR003835 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases | Back alignment and domain information |
|---|
Probab=94.02 E-value=4.1 Score=46.11 Aligned_cols=250 Identities=20% Similarity=0.253 Sum_probs=130.2
Q ss_pred HcCCCCCEEEEeCccc--chHHHHHHhhcCCCeEEEEEccCCCChHHHhcCCchHHHHHHhHhCCEEcccCHHHHHHHHH
Q 003025 196 VINPEDDYVWIHDYHL--MVLPTFLRRRFTRLRMGFFLHSPFPSSEIYRTLPVREEILKALLNADLIGFHTFDYARHFLS 273 (856)
Q Consensus 196 ~~~~~~D~VwihDyhl--~llp~~lr~~~~~~~i~~flH~PfP~~e~~~~lp~r~eil~~ll~~dligf~t~~~~~~Fl~ 273 (856)
..+| |+|..=||-= +-+...+|++.+..|+.++.= |.+|.==++|-..++.. +|.+- -.+.+-..|.+
T Consensus 80 ~~~p--d~vIlID~pgFNlrlak~lk~~~~~~~viyYI~-----PqvWAWr~~R~~~i~~~--~D~ll-~ifPFE~~~y~ 149 (373)
T PF02684_consen 80 EEKP--DVVILIDYPGFNLRLAKKLKKRGIPIKVIYYIS-----PQVWAWRPGRAKKIKKY--VDHLL-VIFPFEPEFYK 149 (373)
T ss_pred HcCC--CEEEEeCCCCccHHHHHHHHHhCCCceEEEEEC-----CceeeeCccHHHHHHHH--Hhhee-ECCcccHHHHh
Confidence 3466 7888878873 456789999988887876653 45554447776666553 23321 11222223332
Q ss_pred HHHhhhCceecccCceeeEEECCEEEEEEEeecccCchHHHHHhcCchHHHHHHHHHHHc--CCCeE--EEeccCccccC
Q 003025 274 CCSRMLGLEYQSKRGYIGLEYYGRTVGIKIMPVGIHMGQIESVLRLADKDWRVQELKQQF--EGKTV--LLGVDDMDIFK 349 (856)
Q Consensus 274 ~~~r~lg~~~~~~~~~~~~~~~gr~~~i~i~p~GId~~~~~~~~~~~~~~~~~~~l~~~~--~~k~i--il~VdRld~~K 349 (856)
+.| +-..|-|+.. +|. ....+.. ...++.+ +++++ +|-=+|-...|
T Consensus 150 ------------~~g-~~~~~VGHPl--------~d~-----~~~~~~~----~~~~~~~l~~~~~iIaLLPGSR~~EI~ 199 (373)
T PF02684_consen 150 ------------KHG-VPVTYVGHPL--------LDE-----VKPEPDR----AEAREKLLDPDKPIIALLPGSRKSEIK 199 (373)
T ss_pred ------------ccC-CCeEEECCcc--------hhh-----hccCCCH----HHHHHhcCCCCCcEEEEeCCCCHHHHH
Confidence 111 1233333321 121 1111111 1112222 34432 33445666555
Q ss_pred C-HHHHHHHHHHHHHhCCCCcCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCcccEEEEcCCCCHHHHHH
Q 003025 350 G-VDLKLLAMEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDKPVTLSERAA 428 (856)
Q Consensus 350 G-i~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~~~~lv~~IN~~~~~~~~~pvv~~~~~v~~~el~a 428 (856)
- ++..++|.+++.+++|+++ ++....+. ...+.+++.....+.. .+++.+. .+...
T Consensus 200 rllP~~l~aa~~l~~~~p~l~----fvvp~a~~--------~~~~~i~~~~~~~~~~------~~~~~~~-----~~~~~ 256 (373)
T PF02684_consen 200 RLLPIFLEAAKLLKKQRPDLQ----FVVPVAPE--------VHEELIEEILAEYPPD------VSIVIIE-----GESYD 256 (373)
T ss_pred HHHHHHHHHHHHHHHhCCCeE----EEEecCCH--------HHHHHHHHHHHhhCCC------CeEEEcC-----CchHH
Confidence 4 4788899999999999876 55444321 1122233333222211 1233222 35777
Q ss_pred HHHhcceeeeccccccCCCcccceeeeecCCCCCCCC--CCCCCCCCceEEecCCcccccccCCc-----eeeCCCCHHH
Q 003025 429 YYTIAECVVVTAVRDGMNLTPYEYIVCRQGVSGSESS--SESSAPKKSMLVVSEFIGCSPSLSGA-----IRVNPWNIEA 501 (856)
Q Consensus 429 ly~~ADv~vvtS~~EG~nLv~~Ea~a~~~~~~~~~~~--~~~~~~~~g~lV~Se~~G~~~~l~~a-----l~VnP~d~~~ 501 (856)
++++||+.+++| |.+.+|++..+... .--+ ..+.--=.-.+|-..+.|....+-|- ++-+-.+++.
T Consensus 257 ~m~~ad~al~~S-----GTaTLE~Al~g~P~--Vv~Yk~~~lt~~iak~lvk~~~isL~Niia~~~v~PEliQ~~~~~~~ 329 (373)
T PF02684_consen 257 AMAAADAALAAS-----GTATLEAALLGVPM--VVAYKVSPLTYFIAKRLVKVKYISLPNIIAGREVVPELIQEDATPEN 329 (373)
T ss_pred HHHhCcchhhcC-----CHHHHHHHHhCCCE--EEEEcCcHHHHHHHHHhhcCCEeechhhhcCCCcchhhhcccCCHHH
Confidence 899999999999 78999998885410 0000 00000000012224566666655331 4455678999
Q ss_pred HHHHHHHHHcCCHH
Q 003025 502 TAEAMHEAIQMNEA 515 (856)
Q Consensus 502 ~A~ai~~aL~m~~~ 515 (856)
+++++...|..++.
T Consensus 330 i~~~~~~ll~~~~~ 343 (373)
T PF02684_consen 330 IAAELLELLENPEK 343 (373)
T ss_pred HHHHHHHHhcCHHH
Confidence 99999999985543
|
These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. These enzymes belong to the glycosyltransferase family 19 GT19 from CAZY. Lipid-A-disaccharide synthetase 2.4.1.182 from EC is involved with acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase 2.3.1.129 from EC and tetraacyldisaccharide 4'-kinase 2.7.1.130 from EC in the biosynthesis of the phosphorylated glycolipid, lipid A, in the outer membrane of Escherichia coli and other bacteria. These enzymes catalyse the first disaccharide step in the synthesis of lipid-A-disaccharide.; GO: 0008915 lipid-A-disaccharide synthase activity, 0009245 lipid A biosynthetic process |
| >TIGR01533 lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) family | Back alignment and domain information |
|---|
Probab=94.01 E-value=0.054 Score=58.17 Aligned_cols=54 Identities=26% Similarity=0.375 Sum_probs=39.9
Q ss_pred CCcEEEEEecCCCCCCCCC-------C----------------CCCCCHHHHHHHHHHHhhCCCeEEEecCCChhhHH
Q 003025 589 SKSRAILFDYDGTVMPQTS-------I----------------NKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLG 643 (856)
Q Consensus 589 s~~rlI~~DlDGTLl~~~~-------~----------------~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~ 643 (856)
.+..+|++|+|+|+++..+ . ...+-+.+.+.|+.| ...|..++++|+|+.....
T Consensus 73 ~kp~AVV~DIDeTvLdns~y~~~~~~~~~~~~~~~w~~wv~~~~a~~ipGA~e~L~~L-~~~G~~v~iVTnR~~~~~~ 149 (266)
T TIGR01533 73 DKKYAIVLDLDETVLDNSPYQGYQVLNNKPFDPETWDKWVQAAQAKPVAGALDFLNYA-NSKGVKIFYVSNRSEKEKA 149 (266)
T ss_pred CCCCEEEEeCccccccChHHHHHHhcCCCcCCHHHHHHHHHcCCCCcCccHHHHHHHH-HHCCCeEEEEeCCCcchHH
Confidence 4567999999999996321 0 112347778889997 7789999999999855443
|
which in turn belongs to the haloacid dehalogenase (HAD) superfamily of aspartate-dependent hydrolases. Members are found on the outer membrane of Gram-negative bacteria and the cytoplasmic membrane of Gram-positive bacteria. Most members have classic lipoprotein signal sequences. A critical role of this 5'-nucleotidase in Haemophilus influenzae is the degradation of external riboside in order to allow transport into the cell. An earlier suggested role in hemin transport is no longer current. This enzyme may also have other physiologically significant roles. |
| >PF13439 Glyco_transf_4: Glycosyltransferase Family 4; PDB: 2JJM_E 3MBO_C 2GEJ_A 2GEK_A | Back alignment and domain information |
|---|
Probab=93.96 E-value=0.011 Score=57.95 Aligned_cols=99 Identities=18% Similarity=0.275 Sum_probs=47.2
Q ss_pred HHHHHHcCCCCCEEEEeCcccchHHHHHHhhcCCCeEEEEEccCCCChHHHhcCCch-----HHHHHH-hHhCCEEcccC
Q 003025 191 QRVIEVINPEDDYVWIHDYHLMVLPTFLRRRFTRLRMGFFLHSPFPSSEIYRTLPVR-----EEILKA-LLNADLIGFHT 264 (856)
Q Consensus 191 ~~i~~~~~~~~D~VwihDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~~~~lp~r-----~eil~~-ll~~dligf~t 264 (856)
.++++..+| |+|++|.++...+...... +.++.+++|.+++.........+. ..+.+. .-.+|.+-.-+
T Consensus 73 ~~~i~~~~~--DiVh~~~~~~~~~~~~~~~---~~~~v~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ii~vS 147 (177)
T PF13439_consen 73 RRLIKKEKP--DIVHIHGPPAFWIALLACR---KVPIVYTIHGPYFERRFLKSKLSPYSYLNFRIERKLYKKADRIIAVS 147 (177)
T ss_dssp HHHHHHHT---SEEECCTTHCCCHHHHHHH---CSCEEEEE-HHH--HHTTTTSCCCHHHHHHCTTHHHHCCSSEEEESS
T ss_pred HHHHHHcCC--CeEEecccchhHHHHHhcc---CCCEEEEeCCCcccccccccccchhhhhhhhhhhhHHhcCCEEEEEC
Confidence 334455566 8999999887765544333 899999999888531111111111 111111 23467665555
Q ss_pred HHHHHHHHHHHHhhhCceecccCceeeEEECCEEEEEEEeecccCchHHH
Q 003025 265 FDYARHFLSCCSRMLGLEYQSKRGYIGLEYYGRTVGIKIMPVGIHMGQIE 314 (856)
Q Consensus 265 ~~~~~~Fl~~~~r~lg~~~~~~~~~~~~~~~gr~~~i~i~p~GId~~~~~ 314 (856)
..-.+.+.+ .|+ ...++.++|+|||.++|+
T Consensus 148 ~~~~~~l~~-----~~~---------------~~~ki~vI~ngid~~~F~ 177 (177)
T PF13439_consen 148 ESTKDELIK-----FGI---------------PPEKIHVIYNGIDTDRFR 177 (177)
T ss_dssp HHHHHHHHH-----HT-----------------SS-EEE----B-CCCH-
T ss_pred HHHHHHHHH-----hCC---------------cccCCEEEECCccHHHcC
Confidence 433333332 122 124678899999998874
|
|
| >COG0474 MgtA Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=93.68 E-value=0.36 Score=61.06 Aligned_cols=41 Identities=22% Similarity=0.366 Sum_probs=35.1
Q ss_pred CCCCCCHHHHHHHHHHHhhCCCeEEEecCCChhhHHHhhcCC
Q 003025 608 INKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSPC 649 (856)
Q Consensus 608 ~~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~~ 649 (856)
...+|-+++.++++.| ++.|++++++||-.......+..++
T Consensus 544 ~~Dppr~~v~~aI~~l-~~AGI~v~MiTGD~~~TA~aIa~~~ 584 (917)
T COG0474 544 IEDPPREDVKEAIEEL-REAGIKVWMITGDHVETAIAIAKEC 584 (917)
T ss_pred ccCCCCccHHHHHHHH-HHCCCcEEEECCCCHHHHHHHHHHc
Confidence 4456778999999994 8999999999999999999988544
|
|
| >TIGR01685 MDP-1 magnesium-dependent phosphatase-1 | Back alignment and domain information |
|---|
Probab=93.58 E-value=0.11 Score=52.13 Aligned_cols=56 Identities=25% Similarity=0.287 Sum_probs=43.6
Q ss_pred cEEEEEecCCCCCCCCCC-----------------------CCCCCHHHHHHHHHHHhhCCCeEEEecCC-ChhhHHHhh
Q 003025 591 SRAILFDYDGTVMPQTSI-----------------------NKAPSQAVISIINTLCNDARNTVFVVSGR-GRDCLGKWF 646 (856)
Q Consensus 591 ~rlI~~DlDGTLl~~~~~-----------------------~~~~s~~~~~aL~~L~~d~g~~V~I~TGR-~~~~l~~~~ 646 (856)
.|+++||+|+||.++... .-.+-+.+.++|+.| +++|..++|+|+. ....+...+
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~pGv~elL~~L-k~~G~~l~I~Sn~~~~~~~~~~L 80 (174)
T TIGR01685 2 PRVIVFDLDGTLWDHYMISLLGGPFKPVKQNNSIIIDKSGTEVTLIKEVRDVLQTL-KDAGTYLATASWNDVPEWAYEIL 80 (174)
T ss_pred CcEEEEeCCCCCcCcccccccCCCceeccCCCCeEEeCCCCEEEEcccHHHHHHHH-HHCCCEEEEEeCCCChHHHHHHH
Confidence 689999999999974320 012348889999998 7789999999998 777777766
Q ss_pred c
Q 003025 647 S 647 (856)
Q Consensus 647 ~ 647 (856)
.
T Consensus 81 ~ 81 (174)
T TIGR01685 81 G 81 (174)
T ss_pred H
Confidence 3
|
This model represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterized as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues. |
| >PLN03190 aminophospholipid translocase; Provisional | Back alignment and domain information |
|---|
Probab=93.55 E-value=0.34 Score=62.67 Aligned_cols=39 Identities=21% Similarity=0.175 Sum_probs=33.6
Q ss_pred CCCCCHHHHHHHHHHHhhCCCeEEEecCCChhhHHHhhcC
Q 003025 609 NKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSP 648 (856)
Q Consensus 609 ~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~ 648 (856)
..++-+.+.+++++| ++.|+.|+++||-.......+...
T Consensus 724 ~D~lr~~v~~~I~~l-~~agi~v~mlTGD~~~tAi~IA~s 762 (1178)
T PLN03190 724 EDKLQQGVPEAIESL-RTAGIKVWVLTGDKQETAISIGYS 762 (1178)
T ss_pred ecCCchhHHHHHHHH-HHCCCEEEEECCCCHHHHHHHHHH
Confidence 456788999999996 888999999999999988888744
|
|
| >TIGR01680 Veg_Stor_Prot vegetative storage protein | Back alignment and domain information |
|---|
Probab=93.48 E-value=0.11 Score=55.39 Aligned_cols=50 Identities=22% Similarity=0.312 Sum_probs=38.4
Q ss_pred cEEEEEecCCCCCCCCC-----------------C-------CCCCCHHHHHHHHHHHhhCCCeEEEecCCChhh
Q 003025 591 SRAILFDYDGTVMPQTS-----------------I-------NKAPSQAVISIINTLCNDARNTVFVVSGRGRDC 641 (856)
Q Consensus 591 ~rlI~~DlDGTLl~~~~-----------------~-------~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~ 641 (856)
.-++++|+|+|+++..+ . ...+-+.+++.++.+ .+.|..|+++|||+-..
T Consensus 101 ~dA~V~DIDET~LsN~pY~~~~~~g~e~~~~~~w~~~Wv~~~~ApAlp~al~ly~~l-~~~G~kIf~VSgR~e~~ 174 (275)
T TIGR01680 101 KDTFLFNIDGTALSNIPYYKKHGYGSEKFDSELYDEEFVNKGEAPALPETLKNYNKL-VSLGFKIIFLSGRLKDK 174 (275)
T ss_pred CCEEEEECccccccCHHHHHHhcCCCCcCChhhhhHHHHhcccCCCChHHHHHHHHH-HHCCCEEEEEeCCchhH
Confidence 46999999999994110 1 223457888899996 88899999999998654
|
The proteins represented by this model are close relatives of the plant acid phosphatases (TIGR01675), are limited to members of the Phaseoleae including Glycine max (soybean) and Phaseolus vulgaris (kidney bean). These proteins are highly expressed in the leaves of repeatedly depodded plants. VSP differs most strinkingly from the acid phosphatases in the lack of the conserved nucleophilic aspartate residue in the N-terminus, thus, they should be inactive as phosphatases. This issue was confused by the publication in 1992 of an article claiming activity for the Glycine max VSP. In 1994 this assertion was refuted by the separation of the activity from the VSP. |
| >TIGR03492 conserved hypothetical protein | Back alignment and domain information |
|---|
Probab=93.38 E-value=1.1 Score=51.41 Aligned_cols=138 Identities=17% Similarity=0.149 Sum_probs=80.0
Q ss_pred CeEEEeccC-ccccCCHHHHHHHHHHHHHhCCCCcCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhc---------c
Q 003025 336 KTVLLGVDD-MDIFKGVDLKLLAMEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINE---------T 405 (856)
Q Consensus 336 k~iil~VdR-ld~~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~~~~lv~~IN~---------~ 405 (856)
..+++.-.| -...++++..++|++++.++ |+ +.++....+. .+++.+++.+.+. .++. .
T Consensus 207 ~lllLpGSR~ae~~~~lp~~l~al~~L~~~-~~----~~~v~~~~~~----~~~~~~~~~l~~~--g~~~~~~~~~~~~~ 275 (396)
T TIGR03492 207 RIALLPGSRPPEAYRNLKLLLRALEALPDS-QP----FVFLAAIVPS----LSLEKLQAILEDL--GWQLEGSSEDQTSL 275 (396)
T ss_pred EEEEECCCCHHHHHccHHHHHHHHHHHhhC-CC----eEEEEEeCCC----CCHHHHHHHHHhc--CceecCCccccchh
Confidence 345677777 45567788999999998655 54 3355444332 2334444433221 0000 0
Q ss_pred cCCCCcccEEEEcCCCCHHHHHHHHHhcceeeeccccccCCCcccceeeeecCCCCCCCCCCCCCCCCceEEecCCccc-
Q 003025 406 FGRPGYEPVVFIDKPVTLSERAAYYTIAECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIGC- 484 (856)
Q Consensus 406 ~~~~~~~pvv~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~- 484 (856)
|. ...+.++. ...+..++|++||++|..| |-+..|+++++. |.|+--+.+-
T Consensus 276 ~~---~~~~~v~~---~~~~~~~~l~~ADlvI~rS-----Gt~T~E~a~lg~-----------------P~Ilip~~~~q 327 (396)
T TIGR03492 276 FQ---KGTLEVLL---GRGAFAEILHWADLGIAMA-----GTATEQAVGLGK-----------------PVIQLPGKGPQ 327 (396)
T ss_pred hc---cCceEEEe---chHhHHHHHHhCCEEEECc-----CHHHHHHHHhCC-----------------CEEEEeCCCCH
Confidence 00 00122221 2457899999999999886 355599999865 4444432111
Q ss_pred -----ccc---c-CCceeeCCCCHHHHHHHHHHHHcC
Q 003025 485 -----SPS---L-SGAIRVNPWNIEATAEAMHEAIQM 512 (856)
Q Consensus 485 -----~~~---l-~~al~VnP~d~~~~A~ai~~aL~m 512 (856)
.+. | .+++.+...+.+.++++|.+.|+.
T Consensus 328 ~na~~~~~~~~l~g~~~~l~~~~~~~l~~~l~~ll~d 364 (396)
T TIGR03492 328 FTYGFAEAQSRLLGGSVFLASKNPEQAAQVVRQLLAD 364 (396)
T ss_pred HHHHHHHhhHhhcCCEEecCCCCHHHHHHHHHHHHcC
Confidence 011 1 345555567889999999999874
|
This protein family is restricted to the Cyanobacteria, in one or two copies, save for instances in the genus Deinococcus. This protein shows some sequence similarity, especially toward the C-terminus, to lipid-A-disaccharide synthase (TIGR00215 or pfam02684). The function is unknown. |
| >PF08235 LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 This domain is found in Saccharomyces cerevisiae (Baker's yeast) protein SMP2, proteins with an N-terminal lipin domain (IPR007651 from INTERPRO) and phosphatidylinositol transfer proteins [] | Back alignment and domain information |
|---|
Probab=93.07 E-value=0.14 Score=50.22 Aligned_cols=55 Identities=13% Similarity=0.259 Sum_probs=40.0
Q ss_pred EEEEecCCCCCCCCC--------CCCCCCHHHHHHHHHHHhhCCCeEEEecCCChh---hHHHhhcC
Q 003025 593 AILFDYDGTVMPQTS--------INKAPSQAVISIINTLCNDARNTVFVVSGRGRD---CLGKWFSP 648 (856)
Q Consensus 593 lI~~DlDGTLl~~~~--------~~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~---~l~~~~~~ 648 (856)
++++|+|||++.... ......+.+.+..+++ +++|..++-+|+|+.. ..+.|+..
T Consensus 1 VVvsDIDGTiT~SD~~G~i~~~~G~d~~h~g~~~l~~~i-~~~GY~ilYlTaRp~~qa~~Tr~~L~~ 66 (157)
T PF08235_consen 1 VVVSDIDGTITKSDVLGHILPILGKDWTHPGAAELYRKI-ADNGYKILYLTARPIGQANRTRSWLAQ 66 (157)
T ss_pred CEEEeccCCcCccchhhhhhhccCchhhhhcHHHHHHHH-HHCCeEEEEECcCcHHHHHHHHHHHHH
Confidence 479999999998310 0113457778888886 8899999999999965 45555543
|
SMP2 is involved in plasmid maintenance and respiration []. Lipin proteins are involved in adipose tissue development and insulin resistance []. |
| >KOG0210 consensus P-type ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=93.03 E-value=0.64 Score=54.69 Aligned_cols=37 Identities=24% Similarity=0.296 Sum_probs=30.4
Q ss_pred CCHHHHHHHHHHHhhhcCCCcceEEEEeCCchhHHHHHHcccc
Q 003025 756 VSKGVVAEKIFTTMAESGRHADFVLCIGDDRSDEDMFEIIGNA 798 (856)
Q Consensus 756 vsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~ 798 (856)
.-|+..++.+-++- + ..|.||||+.||..|.+.|+..
T Consensus 767 tQKA~v~~llq~~t---~---krvc~IGDGGNDVsMIq~A~~G 803 (1051)
T KOG0210|consen 767 TQKAQVVRLLQKKT---G---KRVCAIGDGGNDVSMIQAADVG 803 (1051)
T ss_pred hHHHHHHHHHHHhh---C---ceEEEEcCCCccchheeecccc
Confidence 34888888777664 3 6799999999999999999753
|
|
| >TIGR03568 NeuC_NnaA UDP-N-acetyl-D-glucosamine 2-epimerase, UDP-hydrolysing | Back alignment and domain information |
|---|
Probab=92.66 E-value=5.6 Score=44.95 Aligned_cols=73 Identities=11% Similarity=-0.041 Sum_probs=50.0
Q ss_pred EEEEcCCCCHHHHHHHHHhcceeeeccccccCCCcccceeeeecCCCCCCCCCCCCCCCCceEEecCCcccccccC-C-c
Q 003025 414 VVFIDKPVTLSERAAYYTIAECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIGCSPSLS-G-A 491 (856)
Q Consensus 414 vv~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~-~-a 491 (856)
.+.+.++++..++.++++.|+++|-.|- |.. .||.+.+. |+|.- ..=.+.+. | .
T Consensus 263 ~v~l~~~l~~~~~l~Ll~~a~~vitdSS----ggi-~EA~~lg~-----------------Pvv~l--~~R~e~~~~g~n 318 (365)
T TIGR03568 263 NFRLFKSLGQERYLSLLKNADAVIGNSS----SGI-IEAPSFGV-----------------PTINI--GTRQKGRLRADS 318 (365)
T ss_pred CEEEECCCChHHHHHHHHhCCEEEEcCh----hHH-HhhhhcCC-----------------CEEee--cCCchhhhhcCe
Confidence 4567779999999999999999885442 122 79999855 44421 22223332 2 2
Q ss_pred -eeeCCCCHHHHHHHHHHHHc
Q 003025 492 -IRVNPWNIEATAEAMHEAIQ 511 (856)
Q Consensus 492 -l~VnP~d~~~~A~ai~~aL~ 511 (856)
+.| +.|.+++.+++.+++.
T Consensus 319 vl~v-g~~~~~I~~a~~~~~~ 338 (365)
T TIGR03568 319 VIDV-DPDKEEIVKAIEKLLD 338 (365)
T ss_pred EEEe-CCCHHHHHHHHHHHhC
Confidence 447 7799999999999654
|
This family of enzymes catalyzes the combined epimerization and UDP-hydrolysis of UDP-N-acetylglucosamine to N-acetylmannosamine. This is in contrast to the related enzyme WecB (TIGR00236) which retains the UDP moiety. NeuC acts in concert with NeuA and NeuB to synthesize CMP-N5-acetyl-neuraminate. |
| >PF03767 Acid_phosphat_B: HAD superfamily, subfamily IIIB (Acid phosphatase); InterPro: IPR005519 This family of class B acid phosphatases also contains a number of vegetative storage proteins (VPS25) | Back alignment and domain information |
|---|
Probab=92.18 E-value=0.02 Score=60.21 Aligned_cols=57 Identities=21% Similarity=0.280 Sum_probs=41.2
Q ss_pred CCcEEEEEecCCCCCCCCC-----------------------CCCCCCHHHHHHHHHHHhhCCCeEEEecCCChhhHHHh
Q 003025 589 SKSRAILFDYDGTVMPQTS-----------------------INKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKW 645 (856)
Q Consensus 589 s~~rlI~~DlDGTLl~~~~-----------------------~~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~ 645 (856)
.+...|+||+|+|+++... ....+-+.+++.++.+ .+.|..|+++|||+...-...
T Consensus 70 ~~~~avv~DIDeTvLsn~~y~~~~~~~~~~~~~~~w~~wv~~~~~~aip~a~~l~~~~-~~~G~~V~~iT~R~~~~r~~T 148 (229)
T PF03767_consen 70 DKPPAVVFDIDETVLSNSPYYAYLIFGGESFSPEDWDEWVASGKAPAIPGALELYNYA-RSRGVKVFFITGRPESQREAT 148 (229)
T ss_dssp TSEEEEEEESBTTTEEHHHHHHHHHHHTHHH-CCHHHHHHHCTGGEEETTHHHHHHHH-HHTTEEEEEEEEEETTCHHHH
T ss_pred CCCcEEEEECCcccccCHHHHHHHhhccCCCChHHHHHHHhcccCcccHHHHHHHHHH-HHCCCeEEEEecCCchhHHHH
Confidence 4678999999999986110 0112335678888885 888999999999998744444
Q ss_pred h
Q 003025 646 F 646 (856)
Q Consensus 646 ~ 646 (856)
.
T Consensus 149 ~ 149 (229)
T PF03767_consen 149 E 149 (229)
T ss_dssp H
T ss_pred H
Confidence 3
|
The acid phosphatase activity of VPS has been experimentally demonstrated [].; GO: 0003993 acid phosphatase activity; PDB: 3PCT_C 2I34_A 2I33_A 1Z5U_D 1Z5G_A 2AUT_C 1Z88_B 3OCV_A 3OCZ_A 3OCX_A .... |
| >KOG3040 consensus Predicted sugar phosphatase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=92.17 E-value=0.52 Score=47.76 Aligned_cols=60 Identities=17% Similarity=0.302 Sum_probs=45.3
Q ss_pred CCcEEEEEecCCCCCCCCCCCCCCCHHHHHHHHHHHhhCCCeEEEecCCChhhHHHhhcCCCCcc
Q 003025 589 SKSRAILFDYDGTVMPQTSINKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSPCKKLG 653 (856)
Q Consensus 589 s~~rlI~~DlDGTLl~~~~~~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~~~~lg 653 (856)
...+-+++|+-|||-. .+. ..+...++|+.| ++.+.+|=++|.-+.++-..+.+++.++|
T Consensus 5 ~~v~gvLlDlSGtLh~---e~~-avpga~eAl~rL-r~~~~kVkFvTNttk~Sk~~l~~rL~rlg 64 (262)
T KOG3040|consen 5 RAVKGVLLDLSGTLHI---EDA-AVPGAVEALKRL-RDQHVKVKFVTNTTKESKRNLHERLQRLG 64 (262)
T ss_pred cccceEEEeccceEec---ccc-cCCCHHHHHHHH-HhcCceEEEEecCcchhHHHHHHHHHHhC
Confidence 3578899999999997 444 567788999998 87899999998877776555554444444
|
|
| >PF02350 Epimerase_2: UDP-N-acetylglucosamine 2-epimerase; InterPro: IPR003331 UDP-N-acetylglucosamine 2-epimerase 5 | Back alignment and domain information |
|---|
Probab=92.17 E-value=13 Score=41.70 Aligned_cols=259 Identities=16% Similarity=0.060 Sum_probs=128.5
Q ss_pred HHHHHHHHHHHHHHHcCCCCCEEEEeCcccchHHHHHHhhcCCCeEEEEEccCCCChHHHhcCCchHHHHHHhH--hCCE
Q 003025 182 YVSANKIFSQRVIEVINPEDDYVWIHDYHLMVLPTFLRRRFTRLRMGFFLHSPFPSSEIYRTLPVREEILKALL--NADL 259 (856)
Q Consensus 182 Y~~vN~~fa~~i~~~~~~~~D~VwihDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~~~~lp~r~eil~~ll--~~dl 259 (856)
.-.+=..|++.+ +..+| |+|.||.=-...+..-+-....++||+.. |-=-=+.|. .-|.-+|+.|-+. -||+
T Consensus 52 ~~~~~~~~~~~~-~~~~P--d~Vlv~GD~~~~la~alaA~~~~ipv~Hi-eaGlRs~d~--~~g~~de~~R~~i~~la~l 125 (346)
T PF02350_consen 52 TGLAIIELADVL-EREKP--DAVLVLGDRNEALAAALAAFYLNIPVAHI-EAGLRSGDR--TEGMPDEINRHAIDKLAHL 125 (346)
T ss_dssp HHHHHHHHHHHH-HHHT---SEEEEETTSHHHHHHHHHHHHTT-EEEEE-S-----S-T--TSSTTHHHHHHHHHHH-SE
T ss_pred HHHHHHHHHHHH-HhcCC--CEEEEEcCCchHHHHHHHHHHhCCCEEEe-cCCCCcccc--CCCCchhhhhhhhhhhhhh
Confidence 333444444444 44478 89999988877777666666667775532 110000011 1234444444322 2566
Q ss_pred EcccCHHHHHHHHHHHHhhhCceecccCceeeEEECCEEEEEEEeecccCchHHHHHhcCchHHHHHHHHHHHcCCCeEE
Q 003025 260 IGFHTFDYARHFLSCCSRMLGLEYQSKRGYIGLEYYGRTVGIKIMPVGIHMGQIESVLRLADKDWRVQELKQQFEGKTVL 339 (856)
Q Consensus 260 igf~t~~~~~~Fl~~~~r~lg~~~~~~~~~~~~~~~gr~~~i~i~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~k~ii 339 (856)
----|..+.++.++ .|.+. ++ +. .+-.+++|.-........+... ...+.....++.++
T Consensus 126 hf~~t~~~~~~L~~-----~G~~~--~r----I~--------~vG~~~~D~l~~~~~~~~~~~~--~~~i~~~~~~~~iL 184 (346)
T PF02350_consen 126 HFAPTEEARERLLQ-----EGEPP--ER----IF--------VVGNPGIDALLQNKEEIEEKYK--NSGILQDAPKPYIL 184 (346)
T ss_dssp EEESSHHHHHHHHH-----TT--G--GG----EE--------E---HHHHHHHHHHHTTCC-HH--HHHHHHCTTSEEEE
T ss_pred hccCCHHHHHHHHh-----cCCCC--Ce----EE--------EEChHHHHHHHHhHHHHhhhhh--hHHHHhccCCCEEE
Confidence 65567777777765 34421 11 11 1224567654332211111110 12222223445556
Q ss_pred EeccCcccc---CCHHHHHHHHHHHHHhCCCCcCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCcccEEE
Q 003025 340 LGVDDMDIF---KGVDLKLLAMEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVF 416 (856)
Q Consensus 340 l~VdRld~~---KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~~~~lv~~IN~~~~~~~~~pvv~ 416 (856)
+..=|.... ......+.+++.+.+. +++. +|....++ ....+.+.+...++ ..+.
T Consensus 185 vt~H~~t~~~~~~~~~~i~~~l~~L~~~-~~~~----vi~~~hn~-------p~~~~~i~~~l~~~---------~~v~- 242 (346)
T PF02350_consen 185 VTLHPVTNEDNPERLEQILEALKALAER-QNVP----VIFPLHNN-------PRGSDIIIEKLKKY---------DNVR- 242 (346)
T ss_dssp EE-S-CCCCTHH--HHHHHHHHHHHHHH-TTEE----EEEE--S--------HHHHHHHHHHHTT----------TTEE-
T ss_pred EEeCcchhcCChHHHHHHHHHHHHHHhc-CCCc----EEEEecCC-------chHHHHHHHHhccc---------CCEE-
Confidence 666554443 3466777888888777 4433 44444322 12223332222221 1244
Q ss_pred EcCCCCHHHHHHHHHhcceeeeccccccCCCcccceeeeecCCCCCCCCCCCCCCCCceEEecCCccccccc---CCcee
Q 003025 417 IDKPVTLSERAAYYTIAECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIGCSPSL---SGAIR 493 (856)
Q Consensus 417 ~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l---~~al~ 493 (856)
+..+++..++.++++.|+++|-.|- | +..||..++. |+|.=...|-.++. ..+++
T Consensus 243 ~~~~l~~~~~l~ll~~a~~vvgdSs--G---I~eEa~~lg~-----------------P~v~iR~~geRqe~r~~~~nvl 300 (346)
T PF02350_consen 243 LIEPLGYEEYLSLLKNADLVVGDSS--G---IQEEAPSLGK-----------------PVVNIRDSGERQEGRERGSNVL 300 (346)
T ss_dssp EE----HHHHHHHHHHESEEEESSH--H---HHHHGGGGT-------------------EEECSSS-S-HHHHHTTSEEE
T ss_pred EECCCCHHHHHHHHhcceEEEEcCc--c---HHHHHHHhCC-----------------eEEEecCCCCCHHHHhhcceEE
Confidence 4457899999999999999887763 2 2339999855 66665666655555 34566
Q ss_pred eCCCCHHHHHHHHHHHHcC
Q 003025 494 VNPWNIEATAEAMHEAIQM 512 (856)
Q Consensus 494 VnP~d~~~~A~ai~~aL~m 512 (856)
|. .|.+++.+||.+++..
T Consensus 301 v~-~~~~~I~~ai~~~l~~ 318 (346)
T PF02350_consen 301 VG-TDPEAIIQAIEKALSD 318 (346)
T ss_dssp ET-SSHHHHHHHHHHHHH-
T ss_pred eC-CCHHHHHHHHHHHHhC
Confidence 65 8999999999999974
|
1.3.14 from EC catalyses the production of UDP-ManNAc from UDP-GlcNAc. Some of the enzymes is this family are bifunctional. In microorganisms the epimerase is involved in in the synthesis of the capsule precursor UDP-ManNAcA [, ]. The protein from rat liver displays both epimerase and kinase activity [].; GO: 0008761 UDP-N-acetylglucosamine 2-epimerase activity, 0006047 UDP-N-acetylglucosamine metabolic process, 0009103 lipopolysaccharide biosynthetic process; PDB: 1V4V_B 3BEO_B 3DZC_B 3OT5_B 1O6C_B 1VGV_D 1F6D_C. |
| >PF13844 Glyco_transf_41: Glycosyl transferase family 41; PDB: 3PE4_C 3PE3_D 3TAX_C 2XGO_A 2JLB_B 2XGM_A 2VSY_B 2XGS_B 2VSN_A | Back alignment and domain information |
|---|
Probab=92.05 E-value=1.2 Score=51.64 Aligned_cols=131 Identities=18% Similarity=0.220 Sum_probs=71.2
Q ss_pred ecccCchHHHHHhcCchHHHH--HHHHHHHc---CCCeEEEeccCccccCCHHHHHHHHHHHHHhCCCCcCceEEEEEec
Q 003025 305 PVGIHMGQIESVLRLADKDWR--VQELKQQF---EGKTVLLGVDDMDIFKGVDLKLLAMEHLLKQHPKWQGRAVLVQIAN 379 (856)
Q Consensus 305 p~GId~~~~~~~~~~~~~~~~--~~~l~~~~---~~k~iil~VdRld~~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~ 379 (856)
.+|.-..+....+...+.... +..-|++| ++..++.+..++ .|=-+..+..+.++|++-|+-+ |+....
T Consensus 249 ~~~~~~~~~~~~~~~g~~~~~~~v~~~R~~~gLp~d~vvF~~fn~~--~KI~p~~l~~W~~IL~~vP~S~----L~L~~~ 322 (468)
T PF13844_consen 249 QNGLATTQTNNKAATGEEVPQNIVVTTRAQYGLPEDAVVFGSFNNL--FKISPETLDLWARILKAVPNSR----LWLLRF 322 (468)
T ss_dssp EECCGHHHH-HHHHTTSS--SSEEEEETGGGT--SSSEEEEE-S-G--GG--HHHHHHHHHHHHHSTTEE----EEEEET
T ss_pred ecccchhhhhccccCCccCCccccccCHHHcCCCCCceEEEecCcc--ccCCHHHHHHHHHHHHhCCCcE----EEEeeC
Confidence 567776666554432221110 11124455 456666666665 4667889999999999999754 666654
Q ss_pred CCCCCchhHHHHHHHHHHHHHHHhcccCCCCcccEEEEcCCCCHHHHHHHHHhcceeeeccccccCCCcccceeeee
Q 003025 380 PARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDKPVTLSERAAYYTIAECVVVTAVRDGMNLTPYEYIVCR 456 (856)
Q Consensus 380 p~r~~~~~~~~l~~~~~~lv~~IN~~~~~~~~~pvv~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~a~~ 456 (856)
+.. + ++.+.+.+.+ .|- .-.-++ |.+..+.+|..+.|+.+|||+-|..+-| +.+.+||++++
T Consensus 323 ~~~--~------~~~l~~~~~~----~Gv-~~~Ri~-f~~~~~~~ehl~~~~~~DI~LDT~p~nG-~TTt~dALwmG 384 (468)
T PF13844_consen 323 PAS--G------EARLRRRFAA----HGV-DPDRII-FSPVAPREEHLRRYQLADICLDTFPYNG-GTTTLDALWMG 384 (468)
T ss_dssp STT--H------HHHHHHHHHH----TTS--GGGEE-EEE---HHHHHHHGGG-SEEE--SSS---SHHHHHHHHHT
T ss_pred CHH--H------HHHHHHHHHH----cCC-ChhhEE-EcCCCCHHHHHHHhhhCCEEeeCCCCCC-cHHHHHHHHcC
Confidence 431 1 1233333333 221 223354 4556788999999999999999987766 47889999984
|
|
| >PF11019 DUF2608: Protein of unknown function (DUF2608); InterPro: IPR022565 This family is conserved in Bacteria | Back alignment and domain information |
|---|
Probab=91.79 E-value=2.2 Score=45.62 Aligned_cols=56 Identities=14% Similarity=0.208 Sum_probs=40.7
Q ss_pred eCCCCHHHHHHHHHHHhhhcCCCcceEEEEeCCchhHHHHHHccccccCCCCCCCccEEEEEeCCC
Q 003025 753 PQGVSKGVVAEKIFTTMAESGRHADFVLCIGDDRSDEDMFEIIGNATSSGVLSSNASVFACTVGQK 818 (856)
Q Consensus 753 p~gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~ 818 (856)
-.|.+||.++..++.++ |..|+.|++|-|+...+.-.+.+=.. .+-.++++.....
T Consensus 158 t~~~~KG~~L~~fL~~~---~~~pk~IIfIDD~~~nl~sv~~a~k~-------~~I~f~G~~Yt~~ 213 (252)
T PF11019_consen 158 TGGQDKGEVLKYFLDKI---NQSPKKIIFIDDNKENLKSVEKACKK-------SGIDFIGFHYTGA 213 (252)
T ss_pred eCCCccHHHHHHHHHHc---CCCCCeEEEEeCCHHHHHHHHHHHhh-------CCCcEEEEEEcch
Confidence 36788999999999999 99999999999997665544443221 1224567777654
|
The function is not known. |
| >TIGR01663 PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase | Back alignment and domain information |
|---|
Probab=91.36 E-value=0.24 Score=58.28 Aligned_cols=50 Identities=16% Similarity=0.268 Sum_probs=38.7
Q ss_pred CCcEEEEEecCCCCCCCCCCC---------CCCCHHHHHHHHHHHhhCCCeEEEecCCCh
Q 003025 589 SKSRAILFDYDGTVMPQTSIN---------KAPSQAVISIINTLCNDARNTVFVVSGRGR 639 (856)
Q Consensus 589 s~~rlI~~DlDGTLl~~~~~~---------~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~ 639 (856)
...|+++||+||||+...+.. .-+.+.+.++|++| .+.|+.++|+|..+.
T Consensus 166 ~~~Kia~fD~DGTLi~t~sg~~~~~~~~d~~~l~pgV~e~L~~L-~~~Gy~IvIvTNQ~g 224 (526)
T TIGR01663 166 GQEKIAGFDLDGTIIKTKSGKVFPKGPDDWQIIFPEIPEKLKEL-EADGFKICIFTNQGG 224 (526)
T ss_pred ccCcEEEEECCCCccccCCCccCCCCHHHeeecccCHHHHHHHH-HHCCCEEEEEECCcc
Confidence 457999999999999733210 12457888999998 788999999998665
|
Note that the EC number for the kinase function is: 2.7.1.78 |
| >smart00577 CPDc catalytic domain of ctd-like phosphatases | Back alignment and domain information |
|---|
Probab=90.56 E-value=0.42 Score=46.61 Aligned_cols=56 Identities=14% Similarity=0.165 Sum_probs=41.9
Q ss_pred cEEEEEecCCCCCCCCC-C-----CC-----------------CCCHHHHHHHHHHHhhCCCeEEEecCCChhhHHHhhc
Q 003025 591 SRAILFDYDGTVMPQTS-I-----NK-----------------APSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFS 647 (856)
Q Consensus 591 ~rlI~~DlDGTLl~~~~-~-----~~-----------------~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~ 647 (856)
++++++|+||||+.... + .. .+-+.+.+.|+.| + .+..++|+|+.+...++..+.
T Consensus 2 k~~lvldld~tl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~pG~~e~L~~L-~-~~~~l~I~Ts~~~~~~~~il~ 79 (148)
T smart00577 2 KKTLVLDLDETLVHSTHRSFKEWTNRDFIVPVLIDGHPHGVYVKKRPGVDEFLKRA-S-ELFELVVFTAGLRMYADPVLD 79 (148)
T ss_pred CcEEEEeCCCCeECCCCCcCCCCCccceEEEEEeCCceEEEEEEECCCHHHHHHHH-H-hccEEEEEeCCcHHHHHHHHH
Confidence 57899999999998421 0 00 1236778889997 4 479999999999998888774
Q ss_pred C
Q 003025 648 P 648 (856)
Q Consensus 648 ~ 648 (856)
.
T Consensus 80 ~ 80 (148)
T smart00577 80 L 80 (148)
T ss_pred H
Confidence 3
|
|
| >cd03784 GT1_Gtf_like This family includes the Gtfs, a group of homologous glycosyltransferases involved in the final stages of the biosynthesis of antibiotics vancomycin and related chloroeremomycin | Back alignment and domain information |
|---|
Probab=89.90 E-value=21 Score=40.51 Aligned_cols=73 Identities=18% Similarity=0.150 Sum_probs=49.8
Q ss_pred EEEcCCCCHHHHHHHHHhcceeeeccccccCCCcccceeeeecCCCCCCCCCCCCCCCCceEEecCCccc----cccc--
Q 003025 415 VFIDKPVTLSERAAYYTIAECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIGC----SPSL-- 488 (856)
Q Consensus 415 v~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~----~~~l-- 488 (856)
+.+.+.+++.+ ++..||++| .+-|+ -+..|+++++. |+|+.-+.+- +..+
T Consensus 290 v~~~~~~p~~~---ll~~~d~~I---~hgG~-~t~~eal~~Gv-----------------P~v~~P~~~dQ~~~a~~~~~ 345 (401)
T cd03784 290 VRVVDFVPHDW---LLPRCAAVV---HHGGA-GTTAAALRAGV-----------------PQLVVPFFGDQPFWAARVAE 345 (401)
T ss_pred eEEeCCCCHHH---Hhhhhheee---ecCCc-hhHHHHHHcCC-----------------CEEeeCCCCCcHHHHHHHHH
Confidence 45566777654 577799998 45665 56789999965 6666655442 2222
Q ss_pred -CCceeeCCC--CHHHHHHHHHHHHc
Q 003025 489 -SGAIRVNPW--NIEATAEAMHEAIQ 511 (856)
Q Consensus 489 -~~al~VnP~--d~~~~A~ai~~aL~ 511 (856)
+-|+.+++. +.+++++++.++|+
T Consensus 346 ~G~g~~l~~~~~~~~~l~~al~~~l~ 371 (401)
T cd03784 346 LGAGPALDPRELTAERLAAALRRLLD 371 (401)
T ss_pred CCCCCCCCcccCCHHHHHHHHHHHhC
Confidence 225666554 68999999999997
|
Gtfs transfer sugar moieties from an activated NDP-sugar donor to the oxidatively cross-linked heptapeptide core of vancomycin group antibiotics. The core structure is important for the bioactivity of the antibiotics. |
| >PRK13582 thrH phosphoserine phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=88.41 E-value=0.5 Score=48.40 Aligned_cols=33 Identities=12% Similarity=0.206 Sum_probs=25.6
Q ss_pred HHHHHHHHHHHhhCCCeEEEecCCChhhHHHhhcC
Q 003025 614 QAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSP 648 (856)
Q Consensus 614 ~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~ 648 (856)
+.+.+.|+.| ++. +.++|+|+.....+..++..
T Consensus 71 pg~~e~L~~L-~~~-~~~~IvS~~~~~~~~~~l~~ 103 (205)
T PRK13582 71 PGAVEFLDWL-RER-FQVVILSDTFYEFAGPLMRQ 103 (205)
T ss_pred CCHHHHHHHH-Hhc-CCEEEEeCCcHHHHHHHHHH
Confidence 3455778886 555 89999999999988888754
|
|
| >COG3882 FkbH Predicted enzyme involved in methoxymalonyl-ACP biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=87.96 E-value=1.3 Score=50.29 Aligned_cols=74 Identities=15% Similarity=0.174 Sum_probs=56.8
Q ss_pred CHHHHHHHHHcCCcEEEEEecCCCCCCCCC-------------CCCCCCHHHHHHHHHHHhhCCCeEEEecCCChhhHHH
Q 003025 578 SIDAIVSAYLRSKSRAILFDYDGTVMPQTS-------------INKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGK 644 (856)
Q Consensus 578 ~~~~i~~~y~~s~~rlI~~DlDGTLl~~~~-------------~~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~ 644 (856)
.+..++.+-.....|.+++|+|+||..-.- ..+.+-.+..+.+..| .++|..++|||=-....+.+
T Consensus 209 ei~Sl~~A~~g~~kK~LVLDLDNTLWGGVIGedGv~GI~Ls~~~~G~~fk~fQ~~Ik~l-~kqGVlLav~SKN~~~da~e 287 (574)
T COG3882 209 EIASLLAAMSGKSKKALVLDLDNTLWGGVIGEDGVDGIRLSNSAEGEAFKTFQNFIKGL-KKQGVLLAVCSKNTEKDAKE 287 (574)
T ss_pred HHHHHHHHhhCcccceEEEecCCcccccccccccccceeecCCCCchhHHHHHHHHHHH-HhccEEEEEecCCchhhHHH
Confidence 456677777788899999999999986110 1122335666778887 78899999999999999999
Q ss_pred hhcCCCCc
Q 003025 645 WFSPCKKL 652 (856)
Q Consensus 645 ~~~~~~~l 652 (856)
.|..-|.+
T Consensus 288 vF~khp~M 295 (574)
T COG3882 288 VFRKHPDM 295 (574)
T ss_pred HHhhCCCe
Confidence 99776654
|
|
| >PF12689 Acid_PPase: Acid Phosphatase; InterPro: IPR010036 This entry represents two closely related clades of sequences from eukaryotes and archaea | Back alignment and domain information |
|---|
Probab=87.93 E-value=3.3 Score=41.38 Aligned_cols=84 Identities=21% Similarity=0.233 Sum_probs=43.6
Q ss_pred ccceEEeeecCCCCCCchhHHHHHHHHHHH-hcCCCeEEEEcCeEEEEEeCCCCHHHHHHHHHHHhhhcCCCcceEEEEe
Q 003025 705 ESALVWHHRDADPGFGSSQAKELLDHLESV-LANEPAAVKSGQFIVEVKPQGVSKGVVAEKIFTTMAESGRHADFVLCIG 783 (856)
Q Consensus 705 ~~~l~~~~~~~dp~~~~~~a~el~~~L~~~-l~~~~~~v~~g~~~vEI~p~gvsKG~al~~Ll~~l~~~gi~~d~vlaiG 783 (856)
+..+....+...|+ -|+++++.++=. ..........--.++||.|. +|-.=.+.|.+.. |+++++++.|=
T Consensus 61 gv~lavASRt~~P~----~A~~~L~~l~i~~~~~~~~~~~~~F~~~eI~~g--sK~~Hf~~i~~~t---gI~y~eMlFFD 131 (169)
T PF12689_consen 61 GVKLAVASRTDEPD----WARELLKLLEIDDADGDGVPLIEYFDYLEIYPG--SKTTHFRRIHRKT---GIPYEEMLFFD 131 (169)
T ss_dssp T--EEEEE--S-HH----HHHHHHHHTT-C----------CCECEEEESSS---HHHHHHHHHHHH------GGGEEEEE
T ss_pred CCEEEEEECCCChH----HHHHHHHhcCCCccccccccchhhcchhheecC--chHHHHHHHHHhc---CCChhHEEEec
Confidence 34445545444443 356666665211 01112333333456999985 9999999999988 99999999999
Q ss_pred CCchhHHHHHHccc
Q 003025 784 DDRSDEDMFEIIGN 797 (856)
Q Consensus 784 D~~ND~~Mf~~ag~ 797 (856)
|.....+--+.+|.
T Consensus 132 De~~N~~~v~~lGV 145 (169)
T PF12689_consen 132 DESRNIEVVSKLGV 145 (169)
T ss_dssp S-HHHHHHHHTTT-
T ss_pred CchhcceeeEecCc
Confidence 97655455555664
|
The mouse enzyme has been characterised as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues [, ].; GO: 0016791 phosphatase activity; PDB: 1U7P_A 1U7O_A 2WM8_A. |
| >TIGR01545 YfhB_g-proteo haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB | Back alignment and domain information |
|---|
Probab=87.90 E-value=1.3 Score=46.01 Aligned_cols=23 Identities=9% Similarity=0.195 Sum_probs=19.9
Q ss_pred cceEEEEeCCchhHHHHHHcccc
Q 003025 776 ADFVLCIGDDRSDEDMFEIIGNA 798 (856)
Q Consensus 776 ~d~vlaiGD~~ND~~Mf~~ag~~ 798 (856)
.+...+.|||.||.+||+.+++.
T Consensus 175 ~~~~~aYsDS~~D~pmL~~a~~~ 197 (210)
T TIGR01545 175 LKLYSGYSDSKQDNPLLAFCEHR 197 (210)
T ss_pred hhheEEecCCcccHHHHHhCCCc
Confidence 45568999999999999999973
|
The gene name comes from the E. coli gene. There is currently no information regarding the function of this gene. |
| >PF05152 DUF705: Protein of unknown function (DUF705); InterPro: IPR007827 This family contains uncharacterised baculoviral proteins | Back alignment and domain information |
|---|
Probab=87.29 E-value=1.9 Score=46.17 Aligned_cols=58 Identities=17% Similarity=0.245 Sum_probs=45.7
Q ss_pred CcEEEEEecCCCCCCCCCCCCCCCHHHHHHHHHHHhhCCCeEEEecCCChhhHHHhhcC
Q 003025 590 KSRAILFDYDGTVMPQTSINKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSP 648 (856)
Q Consensus 590 ~~rlI~~DlDGTLl~~~~~~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~ 648 (856)
...+|++|+|.||+.......-+.+.+.+.|.+| ++.|..+++=|--+.+.+..-+..
T Consensus 121 ~phVIVfDlD~TLItd~~~v~Ir~~~v~~sL~~L-k~~g~vLvLWSyG~~eHV~~sl~~ 178 (297)
T PF05152_consen 121 PPHVIVFDLDSTLITDEGDVRIRDPAVYDSLREL-KEQGCVLVLWSYGNREHVRHSLKE 178 (297)
T ss_pred CCcEEEEECCCcccccCCccccCChHHHHHHHHH-HHcCCEEEEecCCCHHHHHHHHHH
Confidence 4679999999999983323334679999999998 888988888888888877777643
|
|
| >COG0241 HisB Histidinol phosphatase and related phosphatases [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=87.23 E-value=0.67 Score=46.70 Aligned_cols=38 Identities=16% Similarity=0.065 Sum_probs=33.0
Q ss_pred HHHHHHHHHHHhhhcCCCcceEEEEeCCchhHHHHHHcccc
Q 003025 758 KGVVAEKIFTTMAESGRHADFVLCIGDDRSDEDMFEIIGNA 798 (856)
Q Consensus 758 KG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~ 798 (856)
|.-.++.+++++ ++++...++|||..+|+..-..+|..
T Consensus 107 ~~gm~~~~~~~~---~iD~~~s~~VGD~~~Dlq~a~n~gi~ 144 (181)
T COG0241 107 KPGMLLSALKEY---NIDLSRSYVVGDRLTDLQAAENAGIK 144 (181)
T ss_pred ChHHHHHHHHHh---CCCccceEEecCcHHHHHHHHHCCCC
Confidence 666677777777 89999999999999999999999874
|
|
| >COG0381 WecB UDP-N-acetylglucosamine 2-epimerase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=87.04 E-value=59 Score=36.73 Aligned_cols=137 Identities=14% Similarity=0.105 Sum_probs=83.4
Q ss_pred CeEEEeccCcccc-CCHHHHHHHHHHHHHhCCCCcCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCcccE
Q 003025 336 KTVLLGVDDMDIF-KGVDLKLLAMEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPV 414 (856)
Q Consensus 336 k~iil~VdRld~~-KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~~~~lv~~IN~~~~~~~~~pv 414 (856)
+-+++..-|-.-. +++...+.|+.++++++|+.. +|- -+-.| +-+++.. +.+++ -.+.
T Consensus 205 ~~iLvT~HRreN~~~~~~~i~~al~~i~~~~~~~~----viy-p~H~~---~~v~e~~----------~~~L~---~~~~ 263 (383)
T COG0381 205 KYILVTAHRRENVGEPLEEICEALREIAEEYPDVI----VIY-PVHPR---PRVRELV----------LKRLK---NVER 263 (383)
T ss_pred cEEEEEcchhhcccccHHHHHHHHHHHHHhCCCce----EEE-eCCCC---hhhhHHH----------HHHhC---CCCc
Confidence 4667777776655 999999999999999998754 332 22222 2222222 11222 1223
Q ss_pred EEEcCCCCHHHHHHHHHhcceeeeccccccCCCcccceeeeecCCCCCCCCCCCCCCCCceEEecCCcccccccC-C-ce
Q 003025 415 VFIDKPVTLSERAAYYTIAECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIGCSPSLS-G-AI 492 (856)
Q Consensus 415 v~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~-~-al 492 (856)
+.+..++...+...|...|-+.+--| |=.--||-.-+. -++++=+.+.=.+.+. | .+
T Consensus 264 v~li~pl~~~~f~~L~~~a~~iltDS-----GgiqEEAp~lg~----------------Pvl~lR~~TERPE~v~agt~~ 322 (383)
T COG0381 264 VKLIDPLGYLDFHNLMKNAFLILTDS-----GGIQEEAPSLGK----------------PVLVLRDTTERPEGVEAGTNI 322 (383)
T ss_pred EEEeCCcchHHHHHHHHhceEEEecC-----CchhhhHHhcCC----------------cEEeeccCCCCccceecCceE
Confidence 44555899999999999996655444 122344444322 2444444444445553 3 35
Q ss_pred eeCCCCHHHHHHHHHHHHcCCHH
Q 003025 493 RVNPWNIEATAEAMHEAIQMNEA 515 (856)
Q Consensus 493 ~VnP~d~~~~A~ai~~aL~m~~~ 515 (856)
+|+ .|.+.+.+++.+++++++.
T Consensus 323 lvg-~~~~~i~~~~~~ll~~~~~ 344 (383)
T COG0381 323 LVG-TDEENILDAATELLEDEEF 344 (383)
T ss_pred EeC-ccHHHHHHHHHHHhhChHH
Confidence 665 4789999999999986544
|
|
| >COG0707 MurG UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=86.79 E-value=14 Score=41.62 Aligned_cols=146 Identities=16% Similarity=0.138 Sum_probs=82.7
Q ss_pred CCeEEEeccCccccCCHHHHHHHHHHHHHhCCCCcCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCcccE
Q 003025 335 GKTVLLGVDDMDIFKGVDLKLLAMEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPV 414 (856)
Q Consensus 335 ~k~iil~VdRld~~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~~~~lv~~IN~~~~~~~~~pv 414 (856)
+++.||-+|-=--.+.+...+. ..+..-++ ++.+++++.+. . +++++....++ +. +
T Consensus 182 ~~~~ilV~GGS~Ga~~ln~~v~---~~~~~l~~---~~~v~~~~G~~----~-~~~~~~~~~~~-----------~~--~ 237 (357)
T COG0707 182 DKKTILVTGGSQGAKALNDLVP---EALAKLAN---RIQVIHQTGKN----D-LEELKSAYNEL-----------GV--V 237 (357)
T ss_pred CCcEEEEECCcchhHHHHHHHH---HHHHHhhh---CeEEEEEcCcc----h-HHHHHHHHhhc-----------Cc--E
Confidence 6777777765443333444444 33333222 45577776332 2 33444333222 21 1
Q ss_pred EEEcCCCCHHHHHHHHHhcceeeeccccccCCCcccceeeeecCCCCCCCCCCCCCCCCceEEecCCccc--cccc----
Q 003025 415 VFIDKPVTLSERAAYYTIAECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIGC--SPSL---- 488 (856)
Q Consensus 415 v~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~--~~~l---- 488 (856)
. +... .+++.++|++||++|.=|= +++..|..+++. |.|+=-+... .++.
T Consensus 238 ~-v~~f--~~dm~~~~~~ADLvIsRaG----a~Ti~E~~a~g~-----------------P~IliP~p~~~~~~Q~~NA~ 293 (357)
T COG0707 238 R-VLPF--IDDMAALLAAADLVISRAG----ALTIAELLALGV-----------------PAILVPYPPGADGHQEYNAK 293 (357)
T ss_pred E-EeeH--HhhHHHHHHhccEEEeCCc----ccHHHHHHHhCC-----------------CEEEeCCCCCccchHHHHHH
Confidence 1 1222 3569999999999886552 588999999966 4555444443 1222
Q ss_pred -----CCceeeCCCC--HHHHHHHHHHHHcCCHHHHHHHHHHHhhhhhc
Q 003025 489 -----SGAIRVNPWN--IEATAEAMHEAIQMNEAEKQLRHEKHYRYVST 530 (856)
Q Consensus 489 -----~~al~VnP~d--~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~ 530 (856)
..|+.+.-++ .+.+++.|.++++. .|+..+|....+.+..
T Consensus 294 ~l~~~gaa~~i~~~~lt~~~l~~~i~~l~~~--~~~l~~m~~~a~~~~~ 340 (357)
T COG0707 294 FLEKAGAALVIRQSELTPEKLAELILRLLSN--PEKLKAMAENAKKLGK 340 (357)
T ss_pred HHHhCCCEEEeccccCCHHHHHHHHHHHhcC--HHHHHHHHHHHHhcCC
Confidence 2366676555 88999999999974 3444455544444433
|
|
| >TIGR01426 MGT glycosyltransferase, MGT family | Back alignment and domain information |
|---|
Probab=85.96 E-value=9.3 Score=43.36 Aligned_cols=98 Identities=16% Similarity=0.084 Sum_probs=59.0
Q ss_pred EEEcCCCCHHHHHHHHHhcceeeeccccccCCCcccceeeeecCCCCCCCCCCCCCCCCceEEecCCccccc----cc--
Q 003025 415 VFIDKPVTLSERAAYYTIAECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIGCSP----SL-- 488 (856)
Q Consensus 415 v~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~----~l-- 488 (856)
+.+.+.+++. .++..||++|. +-|.| +..|+++++. |+|+.-..+-.+ .+
T Consensus 277 v~~~~~~p~~---~ll~~~~~~I~---hgG~~-t~~Eal~~G~-----------------P~v~~p~~~dq~~~a~~l~~ 332 (392)
T TIGR01426 277 VEVRQWVPQL---EILKKADAFIT---HGGMN-STMEALFNGV-----------------PMVAVPQGADQPMTARRIAE 332 (392)
T ss_pred eEEeCCCCHH---HHHhhCCEEEE---CCCch-HHHHHHHhCC-----------------CEEecCCcccHHHHHHHHHH
Confidence 3455677765 56788998885 44665 6799999965 666654433221 12
Q ss_pred -CCceeeCC--CCHHHHHHHHHHHHcCCHHHHHHHHHHHhhhhhc-CCHHHHHH
Q 003025 489 -SGAIRVNP--WNIEATAEAMHEAIQMNEAEKQLRHEKHYRYVST-HDVAYWAR 538 (856)
Q Consensus 489 -~~al~VnP--~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~-~~~~~W~~ 538 (856)
.-|+.++. .+.++++++|.++|..+ +.+.+.++..+.+.. ......++
T Consensus 333 ~g~g~~l~~~~~~~~~l~~ai~~~l~~~--~~~~~~~~l~~~~~~~~~~~~aa~ 384 (392)
T TIGR01426 333 LGLGRHLPPEEVTAEKLREAVLAVLSDP--RYAERLRKMRAEIREAGGARRAAD 384 (392)
T ss_pred CCCEEEeccccCCHHHHHHHHHHHhcCH--HHHHHHHHHHHHHHHcCCHHHHHH
Confidence 12555553 46799999999999743 333444444444443 34444443
|
This model describes the MGT (macroside glycosyltransferase) subfamily of the UDP-glucuronosyltransferase family. Members include a number of glucosyl transferases for macrolide antibiotic inactivation, but also include transferases of glucose-related sugars for macrolide antibiotic production. |
| >PF03031 NIF: NLI interacting factor-like phosphatase; InterPro: IPR004274 The function of this domain is unclear | Back alignment and domain information |
|---|
Probab=85.54 E-value=0.64 Score=45.68 Aligned_cols=56 Identities=13% Similarity=0.236 Sum_probs=37.2
Q ss_pred EEEEEecCCCCCCCCCCCCC----------------CCHHHHHHHHHHHhhCCCeEEEecCCChhhHHHhhcCC
Q 003025 592 RAILFDYDGTVMPQTSINKA----------------PSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSPC 649 (856)
Q Consensus 592 rlI~~DlDGTLl~~~~~~~~----------------~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~~ 649 (856)
|++++|+||||+........ .-|.+.+.|+.++ +...|+|.|..+...+...+..+
T Consensus 1 k~LVlDLD~TLv~~~~~~~~~~~~~~~~~~~~~~v~~RP~l~~FL~~l~--~~~ev~i~T~~~~~ya~~v~~~l 72 (159)
T PF03031_consen 1 KTLVLDLDGTLVHSSSKSPLPYDFKIIDQRGGYYVKLRPGLDEFLEELS--KHYEVVIWTSASEEYAEPVLDAL 72 (159)
T ss_dssp EEEEEE-CTTTEEEESSTCTT-SEEEETEEEEEEEEE-TTHHHHHHHHH--HHCEEEEE-SS-HHHHHHHHHHH
T ss_pred CEEEEeCCCcEEEEeecCCCCcccceeccccceeEeeCchHHHHHHHHH--HhceEEEEEeehhhhhhHHHHhh
Confidence 68999999999973321110 2366777788863 35899999999998887777654
|
It is found in proteins of diverse function including phosphatases some of which may be active in active in ternary elongation complexes and a number of NLI interacting factors. In the phospatases this domain is often present N-terminal to the BRCT domain (IPR001357 from INTERPRO).; GO: 0005515 protein binding; PDB: 3L0Y_A 2GHQ_A 3PGL_A 3L0C_B 1TA0_A 2GHT_A 3L0B_B 1T9Z_A 3QLE_A 2Q5E_E .... |
| >TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490 | Back alignment and domain information |
|---|
Probab=85.22 E-value=1.7 Score=44.22 Aligned_cols=35 Identities=11% Similarity=-0.033 Sum_probs=27.5
Q ss_pred CHHHHHHHHHHHhhCCCeEEEecCCChhhHHHhhcC
Q 003025 613 SQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSP 648 (856)
Q Consensus 613 s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~ 648 (856)
.+.+.+.|+.+ ++.|..++|+||.....++.+...
T Consensus 89 ~~~~~~~l~~l-~~~g~~v~ivS~s~~~~v~~~~~~ 123 (202)
T TIGR01490 89 YPEARDLIRWH-KAEGHTIVLVSASLTILVKPLARI 123 (202)
T ss_pred cHHHHHHHHHH-HHCCCEEEEEeCCcHHHHHHHHHH
Confidence 45666777776 677999999999998888887754
|
A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog. |
| >KOG0208 consensus Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=84.91 E-value=2.3 Score=52.33 Aligned_cols=87 Identities=17% Similarity=0.228 Sum_probs=48.9
Q ss_pred ceeEeecCcccccCCHHHHHHHHHcCCcEEEEEecC--CCCCCCCCCCCCCCHHHHHHHHHHHhhCCCeEEEecCCChhh
Q 003025 564 GFRVVALDPNFRKLSIDAIVSAYLRSKSRAILFDYD--GTVMPQTSINKAPSQAVISIINTLCNDARNTVFVVSGRGRDC 641 (856)
Q Consensus 564 ~~~~~~~~~~f~~l~~~~i~~~y~~s~~rlI~~DlD--GTLl~~~~~~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~ 641 (856)
||||+|+-. +.|+...+.++-+ .++-.+=+|++ |=++- ..+.-+++..+|++| .+.++..++|||-+...
T Consensus 663 GfRVIAlA~--K~L~~~~~~~~~~-~~Rd~vEs~l~FlGLiVm----eNkLK~~T~~VI~eL-~~AnIRtVMcTGDNllT 734 (1140)
T KOG0208|consen 663 GFRVIALAS--KELETSTLQKAQK-LSRDTVESNLEFLGLIVM----ENKLKEETKRVIDEL-NRANIRTVMCTGDNLLT 734 (1140)
T ss_pred CeEEEEEec--CccCcchHHHHhh-ccHhhhhccceeeEEEEe----ecccccccHHHHHHH-HhhcceEEEEcCCchhe
Confidence 689998754 3454443333322 22222222222 22232 334446666777776 66799999999999887
Q ss_pred HHHhhcCCCCccEEeeCCEE
Q 003025 642 LGKWFSPCKKLGIAAEHGYF 661 (856)
Q Consensus 642 l~~~~~~~~~lgliaenG~~ 661 (856)
.-...+ +.|++.+.+..
T Consensus 735 aisVak---eCgmi~p~~~v 751 (1140)
T KOG0208|consen 735 AISVAK---ECGMIEPQVKV 751 (1140)
T ss_pred eeehhh---cccccCCCCeE
Confidence 766663 44555544433
|
|
| >COG4030 Uncharacterized protein conserved in archaea [Function unknown] | Back alignment and domain information |
|---|
Probab=84.81 E-value=3.2 Score=42.70 Aligned_cols=38 Identities=21% Similarity=0.276 Sum_probs=29.6
Q ss_pred CHHHHHHHHHHHhhhcCCCcceEEEEeCCchhHHHHHHcccc
Q 003025 757 SKGVVAEKIFTTMAESGRHADFVLCIGDDRSDEDMFEIIGNA 798 (856)
Q Consensus 757 sKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~ 798 (856)
-|...++.+++.- +++.. ++|+|||.+|.+||+.+...
T Consensus 191 ~ka~i~e~~~ele---~~d~s-a~~VGDSItDv~ml~~~rgr 228 (315)
T COG4030 191 EKAKIMEGYCELE---GIDFS-AVVVGDSITDVKMLEAARGR 228 (315)
T ss_pred chhHHHHHHHhhc---CCCcc-eeEecCcccchHHHHHhhcc
Confidence 3677777777764 55444 89999999999999999754
|
|
| >COG2217 ZntA Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=84.66 E-value=1.3 Score=54.09 Aligned_cols=90 Identities=21% Similarity=0.329 Sum_probs=61.8
Q ss_pred hHHHHHHHHHHHhcCCCeEEEEcC----------------eEEEEEeCCCCHHHHHHHHHHHhhhcCCCcceEEEEeCCc
Q 003025 723 QAKELLDHLESVLANEPAAVKSGQ----------------FIVEVKPQGVSKGVVAEKIFTTMAESGRHADFVLCIGDDR 786 (856)
Q Consensus 723 ~a~el~~~L~~~l~~~~~~v~~g~----------------~~vEI~p~gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ 786 (856)
.+++.++.|++. +......+|+ .+=|+.|.+ |...++.+.++ | ..|+++||+.
T Consensus 541 ~a~~aI~~L~~~--Gi~~~mLTGDn~~~A~~iA~~lGId~v~AellPed--K~~~V~~l~~~----g---~~VamVGDGI 609 (713)
T COG2217 541 DAKEAIAALKAL--GIKVVMLTGDNRRTAEAIAKELGIDEVRAELLPED--KAEIVRELQAE----G---RKVAMVGDGI 609 (713)
T ss_pred hHHHHHHHHHHC--CCeEEEEcCCCHHHHHHHHHHcChHhheccCCcHH--HHHHHHHHHhc----C---CEEEEEeCCc
Confidence 366777777543 1124444443 245666654 88888888653 3 5799999999
Q ss_pred hhHHHHHHccccccCCCCCCCccEEEEEeCCC----ccccceEc--CChhHHHHHHH
Q 003025 787 SDEDMFEIIGNATSSGVLSSNASVFACTVGQK----PSKAKYYL--DDAAEVVTMLE 837 (856)
Q Consensus 787 ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~----~s~A~y~l--~~~~eV~~~L~ 837 (856)
||-+.+..+. +++++|.. ...|+.++ +|...|.++++
T Consensus 610 NDAPALA~Ad--------------VGiAmG~GtDvA~eaADvvL~~~dL~~v~~ai~ 652 (713)
T COG2217 610 NDAPALAAAD--------------VGIAMGSGTDVAIEAADVVLMRDDLSAVPEAID 652 (713)
T ss_pred hhHHHHhhcC--------------eeEeecCCcHHHHHhCCEEEecCCHHHHHHHHH
Confidence 9999999997 46788763 46777776 56777776664
|
|
| >PF13579 Glyco_trans_4_4: Glycosyl transferase 4-like domain; PDB: 3C4Q_B 3C4V_A 3C48_B 1Z2T_A | Back alignment and domain information |
|---|
Probab=84.49 E-value=1.5 Score=41.88 Aligned_cols=68 Identities=16% Similarity=0.151 Sum_probs=39.2
Q ss_pred CCEEEEeCcccchHHHHHHhhcCCCeEEEEEccCCCChHHHhcCCchHHHH-----HHhHhCCEEcccCHHHHHHHHH
Q 003025 201 DDYVWIHDYHLMVLPTFLRRRFTRLRMGFFLHSPFPSSEIYRTLPVREEIL-----KALLNADLIGFHTFDYARHFLS 273 (856)
Q Consensus 201 ~D~VwihDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~~~~lp~r~eil-----~~ll~~dligf~t~~~~~~Fl~ 273 (856)
.|+|++|+++..++..+++++ .++|+.+.+|..+.... .++...++ ..+-.||.|-..+....+.+.+
T Consensus 74 ~Dvv~~~~~~~~~~~~~~~~~-~~~p~v~~~h~~~~~~~----~~~~~~~~~~~~~~~~~~ad~vi~~S~~~~~~l~~ 146 (160)
T PF13579_consen 74 PDVVHAHSPTAGLVAALARRR-RGIPLVVTVHGTLFRRG----SRWKRRLYRWLERRLLRRADRVIVVSEAMRRYLRR 146 (160)
T ss_dssp -SEEEEEHHHHHHHHHHHHHH-HT--EEEE-SS-T----------HHHHHHHHHHHHHHHH-SEEEESSHHHHHHHHH
T ss_pred CeEEEecccchhHHHHHHHHc-cCCcEEEEECCCchhhc----cchhhHHHHHHHHHHHhcCCEEEECCHHHHHHHHH
Confidence 399999999877777777744 38999999997543321 12222222 3445688888888766666654
|
|
| >KOG0202 consensus Ca2+ transporting ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=84.27 E-value=9 Score=46.75 Aligned_cols=55 Identities=16% Similarity=0.261 Sum_probs=45.1
Q ss_pred HHcCCcEEEEEecCCCCCCCCCCCCCCCHHHHHHHHHHHhhCCCeEEEecCCChhhHHHhhcC
Q 003025 586 YLRSKSRAILFDYDGTVMPQTSINKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSP 648 (856)
Q Consensus 586 y~~s~~rlI~~DlDGTLl~~~~~~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~ 648 (856)
|......|.|+-+=|-+= .|-+++.++++. |.+.|+.|..+||-.....+.+-+.
T Consensus 566 ~~~~E~~LtFvGlVGi~D-------PPR~ev~~ai~~-c~~aGIrV~mITGD~~~TA~AI~r~ 620 (972)
T KOG0202|consen 566 RATAESDLTFVGLVGILD-------PPRPEVADAIEL-CRQAGIRVIMITGDNKETAEAIARE 620 (972)
T ss_pred ccccccceEEEEEeeccC-------CCchhHHHHHHH-HHHcCCEEEEEcCCCHHHHHHHHHH
Confidence 344556889988877544 477999999999 6999999999999999999888743
|
|
| >PF07429 Glyco_transf_56: 4-alpha-L-fucosyltransferase glycosyl transferase group 56; InterPro: IPR009993 This family contains the bacterial enzyme 4-alpha-L-fucosyltransferase (Fuc4NAc transferase) (approximately 360 residues long) | Back alignment and domain information |
|---|
Probab=84.21 E-value=9.3 Score=42.32 Aligned_cols=139 Identities=16% Similarity=0.171 Sum_probs=84.7
Q ss_pred eEEEeccCccccCCHHHHHHHHHHHHHhCCCCcCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCcccEEE
Q 003025 337 TVLLGVDDMDIFKGVDLKLLAMEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVF 416 (856)
Q Consensus 337 ~iil~VdRld~~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~~~~lv~~IN~~~~~~~~~pvv~ 416 (856)
.|+|| ..=|++-+....|+++.+.+. .+ +.++. |- +.|...+++.+++.+.+.++ ||. ..+..
T Consensus 187 tILvG-NSgd~sNnHieaL~~L~~~~~--~~----~kIiv---PL-sYg~~n~~Yi~~V~~~~~~l---F~~---~~~~i 249 (360)
T PF07429_consen 187 TILVG-NSGDPSNNHIEALEALKQQFG--DD----VKIIV---PL-SYGANNQAYIQQVIQAGKEL---FGA---ENFQI 249 (360)
T ss_pred EEEEc-CCCCCCccHHHHHHHHHHhcC--CC----eEEEE---EC-CCCCchHHHHHHHHHHHHHh---cCc---cceeE
Confidence 34444 446777777777776655321 12 22221 21 23333456777776666553 432 23556
Q ss_pred EcCCCCHHHHHHHHHhcceeeecccc-ccCCCcccceeeeecCCCCCCCCCCCCCCCCceEEecCCccccccc-CCceee
Q 003025 417 IDKPVTLSERAAYYTIAECVVVTAVR-DGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIGCSPSL-SGAIRV 494 (856)
Q Consensus 417 ~~~~v~~~el~aly~~ADv~vvtS~~-EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l-~~al~V 494 (856)
+...++.+|..++++.+|+.++...| .|||-..+ .+.+ +.++++|+-.-....+ ..++.|
T Consensus 250 L~e~mpf~eYl~lL~~cDl~if~~~RQQgiGnI~l-Ll~~-----------------G~~v~L~~~np~~~~l~~~~ipV 311 (360)
T PF07429_consen 250 LTEFMPFDEYLALLSRCDLGIFNHNRQQGIGNICL-LLQL-----------------GKKVFLSRDNPFWQDLKEQGIPV 311 (360)
T ss_pred hhhhCCHHHHHHHHHhCCEEEEeechhhhHhHHHH-HHHc-----------------CCeEEEecCChHHHHHHhCCCeE
Confidence 78899999999999999999999976 89987654 2333 4589999877665555 335444
Q ss_pred ----CCCCHHHHHHHHHHHH
Q 003025 495 ----NPWNIEATAEAMHEAI 510 (856)
Q Consensus 495 ----nP~d~~~~A~ai~~aL 510 (856)
+.-|...+++|=+++.
T Consensus 312 lf~~d~L~~~~v~ea~rql~ 331 (360)
T PF07429_consen 312 LFYGDELDEALVREAQRQLA 331 (360)
T ss_pred EeccccCCHHHHHHHHHHHh
Confidence 3344455555444333
|
This catalyses the synthesis of Fuc4NAc-ManNAcA-GlcNAc-PP-Und (lipid III) as part of the biosynthetic pathway of enterobacterial common antigen (ECA), a polysaccharide comprised of the trisaccharide repeat unit Fuc4NAc-ManNAcA-GlcNAc [].; GO: 0008417 fucosyltransferase activity, 0009246 enterobacterial common antigen biosynthetic process, 0009276 Gram-negative-bacterium-type cell wall |
| >TIGR02245 HAD_IIID1 HAD-superfamily subfamily IIID hydrolase, TIGR02245 | Back alignment and domain information |
|---|
Probab=83.47 E-value=2.1 Score=43.91 Aligned_cols=57 Identities=9% Similarity=0.132 Sum_probs=41.2
Q ss_pred CCcEEEEEecCCCCCCCCCCCCC----CCHHHHHHHHHHHhhCCCeEEEecCCChhhHHHhhc
Q 003025 589 SKSRAILFDYDGTVMPQTSINKA----PSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFS 647 (856)
Q Consensus 589 s~~rlI~~DlDGTLl~~~~~~~~----~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~ 647 (856)
..+|++++|+|+||++..+.... .-|.+.+.|+.+ .+ ...|+|=|..+...+...+.
T Consensus 19 ~~kklLVLDLDeTLvh~~~~~~~~~~~kRP~l~eFL~~~-~~-~feIvVwTAa~~~ya~~~l~ 79 (195)
T TIGR02245 19 EGKKLLVLDIDYTLFDHRSPAETGEELMRPYLHEFLTSA-YE-DYDIVIWSATSMKWIEIKMT 79 (195)
T ss_pred CCCcEEEEeCCCceEcccccCCCceEEeCCCHHHHHHHH-Hh-CCEEEEEecCCHHHHHHHHH
Confidence 45799999999999984321211 236677888885 33 78899999988887777664
|
This family of sequences appears to belong to the Haloacid Dehalogenase (HAD) superfamily of enzymes by virtue of the presence of three catalytic domains, in this case: LLVLD(ILV)D(YH)T, I(VMG)IWS, and (DN)(VC)K(PA)Lx{15-17}T(IL)(MH)(FV)DD(IL)(GRS)(RK)N. Since this family has no large "cap" domain between motifs 1 and 2 or between 2 and 3, it is formally a "class III" HAD. |
| >KOG0206 consensus P-type ATPase [General function prediction only] | Back alignment and domain information |
|---|
Probab=83.40 E-value=4.1 Score=52.01 Aligned_cols=36 Identities=22% Similarity=0.278 Sum_probs=29.4
Q ss_pred CCHHHHHHHHHHHhhhcCCCcceEEEEeCCchhHHHHHHccc
Q 003025 756 VSKGVVAEKIFTTMAESGRHADFVLCIGDDRSDEDMFEIIGN 797 (856)
Q Consensus 756 vsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~ 797 (856)
.-|+..++.+.+. ..--+++|||+.||..|.+.|..
T Consensus 780 lQKA~Vv~lVk~~------~~~~TLAIGDGANDVsMIQ~AhV 815 (1151)
T KOG0206|consen 780 LQKALVVKLVKKG------LKAVTLAIGDGANDVSMIQEAHV 815 (1151)
T ss_pred HHHHHHHHHHHhc------CCceEEEeeCCCccchheeeCCc
Confidence 4499999998443 24679999999999999998864
|
|
| >PRK10748 flavin mononucleotide phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=82.86 E-value=0.72 Score=48.74 Aligned_cols=38 Identities=16% Similarity=0.048 Sum_probs=33.8
Q ss_pred HHHHHHHHHHHhhhcCCCcceEEEEeCC-chhHHHHHHcccc
Q 003025 758 KGVVAEKIFTTMAESGRHADFVLCIGDD-RSDEDMFEIIGNA 798 (856)
Q Consensus 758 KG~al~~Ll~~l~~~gi~~d~vlaiGD~-~ND~~Mf~~ag~~ 798 (856)
+......+++++ |++++++++|||+ ..|+..-+.+|..
T Consensus 165 ~p~~~~~a~~~~---~~~~~~~~~VGD~~~~Di~~A~~aG~~ 203 (238)
T PRK10748 165 FSDMYHLAAEKL---NVPIGEILHVGDDLTTDVAGAIRCGMQ 203 (238)
T ss_pred cHHHHHHHHHHc---CCChhHEEEEcCCcHHHHHHHHHCCCe
Confidence 577788888888 9999999999999 5999999999973
|
|
| >TIGR03590 PseG pseudaminic acid biosynthesis-associated protein PseG | Back alignment and domain information |
|---|
Probab=82.82 E-value=5 Score=43.55 Aligned_cols=92 Identities=13% Similarity=0.069 Sum_probs=57.1
Q ss_pred CCeEEEeccCccccCCHHHHHHHHHHHHHhCCCCcCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCcccE
Q 003025 335 GKTVLLGVDDMDIFKGVDLKLLAMEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPV 414 (856)
Q Consensus 335 ~k~iil~VdRld~~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~~~~lv~~IN~~~~~~~~~pv 414 (856)
.+++++..|-.|+.+.....++|+.++ .++++ + .|++| +.. +.++++ ++.++. + ..+
T Consensus 170 ~~~iLi~~GG~d~~~~~~~~l~~l~~~---~~~~~--i-~vv~G-~~~---~~~~~l----~~~~~~-~--------~~i 226 (279)
T TIGR03590 170 LRRVLVSFGGADPDNLTLKLLSALAES---QINIS--I-TLVTG-SSN---PNLDEL----KKFAKE-Y--------PNI 226 (279)
T ss_pred cCeEEEEeCCcCCcCHHHHHHHHHhcc---ccCce--E-EEEEC-CCC---cCHHHH----HHHHHh-C--------CCE
Confidence 367999999999987666777777654 22332 2 23333 221 223333 333332 1 113
Q ss_pred EEEcCCCCHHHHHHHHHhcceeeeccccccCCCcccceeeeec
Q 003025 415 VFIDKPVTLSERAAYYTIAECVVVTAVRDGMNLTPYEYIVCRQ 457 (856)
Q Consensus 415 v~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~a~~~ 457 (856)
. +.+. .+++..++..||++|.+ -|.+.+|+++|+.
T Consensus 227 ~-~~~~--~~~m~~lm~~aDl~Is~-----~G~T~~E~~a~g~ 261 (279)
T TIGR03590 227 I-LFID--VENMAELMNEADLAIGA-----AGSTSWERCCLGL 261 (279)
T ss_pred E-EEeC--HHHHHHHHHHCCEEEEC-----CchHHHHHHHcCC
Confidence 3 3333 46899999999998874 4589999999965
|
This protein is found in association with enzymes involved in the biosynthesis of pseudaminic acid, a component of polysaccharide in certain Pseudomonas strains as well as a modification of flagellin in Campylobacter and Hellicobacter. The role of this protein is unclear, although it may participate in N-acetylation in conjunction with, or in the absence of PseH (TIGR03585) as it often scores above the trusted cutoff to pfam00583 representing a family of acetyltransferases. |
| >TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein | Back alignment and domain information |
|---|
Probab=82.25 E-value=1.6 Score=45.13 Aligned_cols=36 Identities=11% Similarity=0.168 Sum_probs=27.8
Q ss_pred CCHHHHHHHHHHHhhCCCeEEEecCCChhhHHHhhcCC
Q 003025 612 PSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSPC 649 (856)
Q Consensus 612 ~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~~ 649 (856)
+.+.+.+.|+.| ++. .+++|+||-....+..++..+
T Consensus 69 l~pga~ell~~l-k~~-~~~~IVS~~~~~~~~~il~~l 104 (203)
T TIGR02137 69 PLEGAVEFVDWL-RER-FQVVILSDTFYEFSQPLMRQL 104 (203)
T ss_pred CCccHHHHHHHH-HhC-CeEEEEeCChHHHHHHHHHHc
Confidence 456677788886 554 499999999999888887553
|
This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338). |
| >PF06941 NT5C: 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C); InterPro: IPR010708 This family consists of several 5' nucleotidase, deoxy (Pyrimidine), and cytosolic type C (NT5C) proteins | Back alignment and domain information |
|---|
Probab=81.38 E-value=1.1 Score=45.64 Aligned_cols=28 Identities=14% Similarity=0.446 Sum_probs=20.1
Q ss_pred CCHHHHHHHHHHHhhCCCeEEEecCCChh
Q 003025 612 PSQAVISIINTLCNDARNTVFVVSGRGRD 640 (856)
Q Consensus 612 ~s~~~~~aL~~L~~d~g~~V~I~TGR~~~ 640 (856)
|-+.+.++|++| .+.|+.++++|+|+..
T Consensus 74 p~~gA~e~l~~L-~~~g~~~~~Itar~~~ 101 (191)
T PF06941_consen 74 PIPGAVEALKKL-RDKGHEIVIITARPPE 101 (191)
T ss_dssp B-TTHHHHHHHH-HTSTTEEEEEEE-SSS
T ss_pred ccHHHHHHHHHH-HHcCCcEEEEEecCcc
Confidence 456788899998 6678788888888754
|
5'(3')-deoxyribonucleotidase is a ubiquitous enzyme in mammalian cells whose physiological function is not known [].; GO: 0016791 phosphatase activity; PDB: 1Z4M_A 1Q92_A 1Q91_A 1Z4J_A 1Z4I_A 1Z4Q_A 1Z4K_A 2JAW_A 1MH9_A 1Z4L_A .... |
| >TIGR02251 HIF-SF_euk Dullard-like phosphatase domain | Back alignment and domain information |
|---|
Probab=81.09 E-value=2.5 Score=41.94 Aligned_cols=56 Identities=9% Similarity=0.129 Sum_probs=34.6
Q ss_pred cEEEEEecCCCCCCCCCCCCC---------------------CCHHHHHHHHHHHhhCCCeEEEecCCChhhHHHhhcC
Q 003025 591 SRAILFDYDGTVMPQTSINKA---------------------PSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSP 648 (856)
Q Consensus 591 ~rlI~~DlDGTLl~~~~~~~~---------------------~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~ 648 (856)
++.+++|+|+||+........ .-+.+.+.|++| .+ ...++|.|.-+...+...+..
T Consensus 1 k~~lvlDLDeTLi~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~RPgl~eFL~~l-~~-~yei~I~Ts~~~~yA~~il~~ 77 (162)
T TIGR02251 1 KKTLVLDLDETLVHSTFKMPKVDADFKVPVLIDGKIIPVYVFKRPHVDEFLERV-SK-WYELVIFTASLEEYADPVLDI 77 (162)
T ss_pred CcEEEEcCCCCcCCCCCCCCCCCCceEEEEEecCcEEEEEEEECCCHHHHHHHH-Hh-cCEEEEEcCCcHHHHHHHHHH
Confidence 368999999999973211100 124556677775 33 367777777777666666643
|
This domain is related to domains found in FCP1-like phosphatases (TIGR02250), and together both are detected by the Pfam model pfam03031. |
| >KOG3109 consensus Haloacid dehalogenase-like hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=80.74 E-value=4 Score=42.06 Aligned_cols=106 Identities=19% Similarity=0.218 Sum_probs=63.9
Q ss_pred EEeeecCCCCCCchhHHHHHHHH--HHHhcCCCeEEEEcC---eEEEEEeCCCCHHHHHHHHHHHhhhcCCC-cceEEEE
Q 003025 709 VWHHRDADPGFGSSQAKELLDHL--ESVLANEPAAVKSGQ---FIVEVKPQGVSKGVVAEKIFTTMAESGRH-ADFVLCI 782 (856)
Q Consensus 709 ~~~~~~~dp~~~~~~a~el~~~L--~~~l~~~~~~v~~g~---~~vEI~p~gvsKG~al~~Ll~~l~~~gi~-~d~vlai 782 (856)
.|.|.+++.. .|..++..| ++.++.- ...-..+ .-+=.+| --.|.+..++.. |+. |.++++|
T Consensus 117 k~~FTNa~k~----HA~r~Lk~LGieDcFegi-i~~e~~np~~~~~vcKP----~~~afE~a~k~a---gi~~p~~t~Ff 184 (244)
T KOG3109|consen 117 KWIFTNAYKV----HAIRILKKLGIEDCFEGI-ICFETLNPIEKTVVCKP----SEEAFEKAMKVA---GIDSPRNTYFF 184 (244)
T ss_pred EEEecCCcHH----HHHHHHHHhChHHhccce-eEeeccCCCCCceeecC----CHHHHHHHHHHh---CCCCcCceEEE
Confidence 5677776543 244555554 3333321 1111111 4444556 456778888877 998 9999999
Q ss_pred eCCchhHHHHHHccccccCCCCCCCccEEEEEeCCC--ccccceEcCChhHHHHHHHHH
Q 003025 783 GDDRSDEDMFEIIGNATSSGVLSSNASVFACTVGQK--PSKAKYYLDDAAEVVTMLEAL 839 (856)
Q Consensus 783 GD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~--~s~A~y~l~~~~eV~~~L~~L 839 (856)
-||.+-+.--+.+|.. +|-+|.. ...+.|.+.......+.+-.|
T Consensus 185 DDS~~NI~~ak~vGl~-------------tvlv~~~~~~~~~d~~l~~ih~~k~a~p~l 230 (244)
T KOG3109|consen 185 DDSERNIQTAKEVGLK-------------TVLVGREHKIKGVDYALEQIHNNKEALPEL 230 (244)
T ss_pred cCchhhHHHHHhccce-------------eEEEEeeecccchHHHHHHhhchhhhchHH
Confidence 9999999999999873 6666643 345556554433333333333
|
|
| >PRK10748 flavin mononucleotide phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=80.57 E-value=3 Score=43.97 Aligned_cols=15 Identities=33% Similarity=0.545 Sum_probs=13.9
Q ss_pred CcEEEEEecCCCCCC
Q 003025 590 KSRAILFDYDGTVMP 604 (856)
Q Consensus 590 ~~rlI~~DlDGTLl~ 604 (856)
++|+|+||+||||++
T Consensus 9 ~~k~iiFDlDGTL~D 23 (238)
T PRK10748 9 RISALTFDLDDTLYD 23 (238)
T ss_pred CceeEEEcCcccccC
Confidence 478999999999999
|
|
| >PLN02811 hydrolase | Back alignment and domain information |
|---|
Probab=80.47 E-value=2.4 Score=44.07 Aligned_cols=38 Identities=13% Similarity=0.001 Sum_probs=33.5
Q ss_pred HHHHHHHHHHHhhhcC---CCcceEEEEeCCchhHHHHHHcccc
Q 003025 758 KGVVAEKIFTTMAESG---RHADFVLCIGDDRSDEDMFEIIGNA 798 (856)
Q Consensus 758 KG~al~~Ll~~l~~~g---i~~d~vlaiGD~~ND~~Mf~~ag~~ 798 (856)
+.......++++ + +.++++++|||+..|+.+-+.+|..
T Consensus 139 ~p~~~~~a~~~~---~~~~~~~~~~v~IgDs~~di~aA~~aG~~ 179 (220)
T PLN02811 139 APDIFLAAARRF---EDGPVDPGKVLVFEDAPSGVEAAKNAGMS 179 (220)
T ss_pred CcHHHHHHHHHh---CCCCCCccceEEEeccHhhHHHHHHCCCe
Confidence 566788888888 6 8899999999999999999999973
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 856 | ||||
| 2wtx_A | 474 | Insight Into The Mechanism Of Enzymatic Glycosyltra | 2e-49 | ||
| 1uqu_A | 482 | Trehalose-6-Phosphate From E. Coli Bound With Udp-G | 3e-49 | ||
| 1gz5_A | 456 | Trehalose-6-Phosphate Synthase. Otsa Length = 456 | 7e-48 | ||
| 4f96_B | 497 | Crystal Structure Of Vlde, The Pseudo-Glycosyltrans | 1e-09 | ||
| 3t5t_A | 496 | Vall From Streptomyces Hygroscopicus In Apo Form Le | 1e-09 | ||
| 3t7d_A | 497 | Vall From Streptomyces Hygroscopicus In Complex Wit | 6e-08 |
| >pdb|2WTX|A Chain A, Insight Into The Mechanism Of Enzymatic Glycosyltransfer With Retention Through The Synthesis And Analysis Of Bisubstrate Glycomimetics Of Trehalose-6-Phosphate Synthase Length = 474 | Back alignment and structure |
|
| >pdb|1UQU|A Chain A, Trehalose-6-Phosphate From E. Coli Bound With Udp-Glucose. Length = 482 | Back alignment and structure |
|
| >pdb|1GZ5|A Chain A, Trehalose-6-Phosphate Synthase. Otsa Length = 456 | Back alignment and structure |
|
| >pdb|4F96|B Chain B, Crystal Structure Of Vlde, The Pseudo-Glycosyltransferase, In Complex With Gdp Length = 497 | Back alignment and structure |
|
| >pdb|3T5T|A Chain A, Vall From Streptomyces Hygroscopicus In Apo Form Length = 496 | Back alignment and structure |
|
| >pdb|3T7D|A Chain A, Vall From Streptomyces Hygroscopicus In Complex With Trehalose Length = 497 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >1uqt_A Alpha, alpha-trehalose-phosphate synthase; glycosyltransferase, transferase; HET: U2F; 2.0A {Escherichia coli} SCOP: c.87.1.6 PDB: 1uqu_A* 2wtx_A* 1gz5_A* Length = 482 | Back alignment and structure |
|---|
Score = 635 bits (1640), Expect = 0.0
Identities = 123/494 (24%), Positives = 235/494 (47%), Gaps = 34/494 (6%)
Query: 62 RVIIVANQLPVKAKRRPDNKGWSFSWDEDSLLLQLKDGLPEDMEVIYVGSLKVDVDLSEQ 121
R+++V+N++ + G L + + L + ++ G + E
Sbjct: 3 RLVVVSNRIAPPDEHAASAGG---------LAVGILGAL-KAAGGLWFGWSGETGN--ED 50
Query: 122 DDVSQLLLDRFKCVPAFLPPDILTKFYHGFCKQHLWPLFHYMLPFSATHGGRFDRSLWEA 181
+ ++ L L ++Y+ F LWP FHY L +F R W+
Sbjct: 51 QPLKKVKKGNITWASFNLSEQDLDEYYNQFSNAVLWPAFHYRLDLV-----QFQRPAWDG 105
Query: 182 YVSANKIFSQRVIEVINPEDDYVWIHDYHLMVLPTFLRRRFTRLRMGFFLHSPFPSSEIY 241
Y+ N + + +++ ++ DD +WIHDYHL+ LR+R R+GFFLH PFP+ EI+
Sbjct: 106 YLRVNALLADKLLPLLQD-DDIIWIHDYHLLPFAHELRKRGVNNRIGFFLHIPFPTPEIF 164
Query: 242 RTLPVREEILKALLNADLIGFHTFDYARHFLSCCSRMLGLEYQSKRGYIGLEYYGRTVGI 301
LP + +L+ L + DL+GF T + FL C S + + +S + + +G+
Sbjct: 165 NALPTYDTLLEQLCDYDLLGFQTENDRLAFLDCLSNLTRVTTRSAKSHT---AWGKAFRT 221
Query: 302 KIMPVGIHMGQIESVLRLADKDWRVQELKQQFEGKTVLLGVDDMDIFKGVDLKLLAMEHL 361
++ P+GI +I ++ +LK + + + V+ +D KG+ + LA E L
Sbjct: 222 EVYPIGIEPKEIAKQAA-GPLPPKLAQLKAELKNVQNIFSVERLDYSKGLPERFLAYEAL 280
Query: 362 LKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDKPV 421
L+++P+ G+ QIA +RG + ++I+ ++ RIN +G+ G+ P+ ++++
Sbjct: 281 LEKYPQHHGKIRYTQIAPTSRGDVQAYQDIRHQLENEAGRINGKYGQLGWTPLYYLNQHF 340
Query: 422 TLSERAAYYTIAECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEF 481
+ ++ +VT +RDGMNL EY+ + +LV+S+F
Sbjct: 341 DRKLLMKIFRYSDVGLVTPLRDGMNLVAKEYVAAQDP------------ANPGVLVLSQF 388
Query: 482 IGCSPSLSGAIRVNPWNIEATAEAMHEAIQMNEAEKQLRHEKHYRYVSTHDVAYWARSFF 541
G + L+ A+ VNP++ + A A+ A+ M+ AE+ RH + + +D+ +W F
Sbjct: 389 AGAANELTSALIVNPYDRDEVAAALDRALTMSLAERISRHAEMLDVIVKNDINHWQECFI 448
Query: 542 QDMERTCKDHFKRR 555
D+++ + +
Sbjct: 449 SDLKQIVPRSAESQ 462
|
| >3t5t_A Putative glycosyltransferase; GTB fold, pseudoglycosyltransferase; 1.70A {Streptomyces hygroscopicus} PDB: 3t7d_A* Length = 496 | Back alignment and structure |
|---|
Score = 585 bits (1509), Expect = 0.0
Identities = 81/505 (16%), Positives = 177/505 (35%), Gaps = 38/505 (7%)
Query: 62 RVIIVANQLPVKAKRRPDNKGWSFSWDEDSLLLQLKDGLPEDMEVIYVGSLKVDVDL--- 118
+ + + + + P W + + + ++ S + D
Sbjct: 4 EIFLASKRAAITYDTDPATGEPRA-WLAPGGTGNVVAEQAGVLNISWIASADSEDDRRAS 62
Query: 119 SEQDDVSQLLLDRFKCVPAFL---PPDILTKFYHGFCKQHLWPLFHYMLPFSATHG-GRF 174
+ D + L + + L P + + +W +Y G
Sbjct: 63 ALNPDGVTMELHSGREILVRLIRHDPAVFRNVQNFMTANLMWAANNYGWDRWTQPSFGSD 122
Query: 175 DRSLWEAYVSANKIFSQRVIEVINP-EDDYVWIHDYHLMVLPTFLRRRFTRLRMGFFLHS 233
R W + + F+ +++ D +HDY L+ +P LR + + F+H
Sbjct: 123 AREGWADFGRFTRDFADAILKSSAQSADPVYLVHDYQLVGVPALLREQRPDAPILLFVHI 182
Query: 234 PFPSSEIYRTLP--VREEILKALLNADLIGFHTFDYARHFLSCCSRMLGLEYQSKRGYIG 291
P+PS++ +R LP +R IL +L A IGF + R+FL + +L + + R +
Sbjct: 183 PWPSADYWRILPKEIRTGILHGMLPATTIGFFADRWCRNFLESVADLLP-DARIDREAMT 241
Query: 292 LEYYGRTVGIKIMPVGIHMGQIESVLRLADKDWRVQELKQQFEGKTVLLGVDDMDIFKGV 351
+E+ G ++ MP+G ++ + +++ +G +++ D K
Sbjct: 242 VEWRGHRTRLRTMPLGYSPLTLD-----GRNPQLPEGIEEWADGHRLVVHSGRTDPIKNA 296
Query: 352 DLKLLAMEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGY 411
+ + A +L + ++ NP R + + N G
Sbjct: 297 ERAVRAF--VLAARGGGLEKTRMLVRMNPNRLYVPANADYVHRVETAVAEANAELGS--- 351
Query: 412 EPVVFIDKPVTLSERAAYYTIAECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAP 471
V ID ++ A + A+ ++ + DG NL+ +E + +
Sbjct: 352 -DTVRIDNDNDVNHTIACFRRADLLIFNSTVDGQNLSTFEAPLVNE-------------- 396
Query: 472 KKSMLVVSEFIGCSPSLSGAIR-VNPWNIEATAEAMHEAIQMNEAEKQLRHEKHYRYVST 530
+ + +++SE G + L R VNP+++ AEA+ A+ ++ +
Sbjct: 397 RDADVILSETCGAAEVLGEYCRSVNPFDLVEQAEAISAALAAGPRQRAEAAARRRDAARP 456
Query: 531 HDVAYWARSFFQDMERTCKDHFKRR 555
+ W ++ +
Sbjct: 457 WTLEAWVQAQLDGLAADHAARTATA 481
|
| >1u02_A Trehalose-6-phosphate phosphatase related protein; structural genomics, PSI; 1.92A {Thermoplasma acidophilum} SCOP: c.108.1.15 Length = 239 | Back alignment and structure |
|---|
Score = 237 bits (606), Expect = 1e-72
Identities = 47/255 (18%), Positives = 94/255 (36%), Gaps = 33/255 (12%)
Query: 593 AILFDYDGTVMPQTSINKAPSQAVIS--IINTLCN-DARNTVFVVSGRGRDCLGKWFSPC 649
I DYDGT++P I P ++ +++ + + R ++V+GR + + ++
Sbjct: 3 LIFLDYDGTLVP---IIMNPEESYADAGLLSLISDLKERFDTYIVTGRSPEEISRFLPLD 59
Query: 650 KKLGIAAEHGYFMRWSADEEWQNCGQSVDFGWIQIAEPVMKLYTESTDGSYIEIKESALV 709
+ + HG + + + N G + + G I K A++
Sbjct: 60 --INMICYHGACSKINGQIVYNNGSDRFL-GVFDRIYEDTRSWVSDFPGLRIYRKNLAVL 116
Query: 710 WHHRDADPGFGSSQAKELLDHLESVLANEPAAVKSGQFIVEVKPQGVSKGVVAEKIFTTM 769
+H +L +E + G+ I+E++ GV+KG +
Sbjct: 117 YHLGLMGA----DMKPKLRSRIEEIARIFGVETYYGKMIIELRVPGVNKGSAIRSV---- 168
Query: 770 AESGRHADFVLCIGDDRSDEDMFEIIGNATSSGVLSSNASVFACTVGQKPSKAKYYLDDA 829
R + GDD +DE FE +A VG+ + AK+++ D
Sbjct: 169 ----RGERPAIIAGDDATDEAAFEANDDA------------LTIKVGEGETHAKFHVADY 212
Query: 830 AEVVTMLEALAEASA 844
E+ +L+ +
Sbjct: 213 IEMRKILKFIEMLGV 227
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 72.2 bits (176), Expect = 5e-13
Identities = 72/546 (13%), Positives = 154/546 (28%), Gaps = 173/546 (31%)
Query: 114 VDVDLSEQD----DVSQLLLDRFK----C--VPAFLPPDILTKFYHGFCKQHLWPLFHYM 163
+D + E D+ + D F C V IL+K H+ M
Sbjct: 7 MDFETGEHQYQYKDILSVFEDAFVDNFDCKDVQDMPKS-ILSK---EEID-HI-----IM 56
Query: 164 LPFSATHGGRFDRSLWEAYVSANKIFSQRVIEVINPEDDYVWIHD-YHLMVL-PTFLRRR 221
+ + R W ++ + V EV+ +Y ++ P+ + R
Sbjct: 57 SKDAVS---GTLRLFWTLLSKQEEMVQKFVEEVLRI--NYKFLMSPIKTEQRQPSMMTRM 111
Query: 222 F--TRLRMGFFLHSPFPSSEIYRTLPV-REEILKALLNADLIGFHTFDYARHFLSCCSRM 278
+ R R+ + ++++ V R + L A
Sbjct: 112 YIEQRDRL-------YNDNQVFAKYNVSRLQPYLKLRQA--------------------- 143
Query: 279 LGLEYQSKRGYIGLEYYGRTVGIKIMPVGIHMGQIESVLRLADKDWRVQELKQQFEGKT- 337
L + + G + G G+ + + A +++ + + K
Sbjct: 144 --LLELRPAKNVLI--DG-------VL-GS--GK--TWV--ALDVCLSYKVQCKMDFKIF 185
Query: 338 -VLLGVDDMDIFKGVDLKLLAMEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIH 396
+ L + + L ++ LL QI R I+ IH
Sbjct: 186 WLNLKNCNSP-----ETVLEMLQKLL------------YQIDPNWTSRSDHSSNIKLRIH 228
Query: 397 ATCKRINETFGRPGYEPVVFI--DKPVTLSERAAYYTIAEC-VVVT----AVRDGMNLTP 449
+ + YE + + + V ++ + + C +++T V D ++
Sbjct: 229 SIQAELRRLLKSKPYENCLLVLLN--VQNAKAWNAFNL-SCKILLTTRFKQVTDFLSAAT 285
Query: 450 YEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIGCSPS-L-SGAIRVNPWNIEATAEAMH 507
+I + S + P + ++ +++ C P L + NP + AE++
Sbjct: 286 TTHIS-------LDHHSMTLTPDEVKSLLLKYLDCRPQDLPREVLTTNPRRLSIIAESIR 338
Query: 508 EAIQMNEAEKQLRHEKHYRYVSTHDVAYWARSFFQDMERTCKDHFKRRCWGIGLSFGFRV 567
+ + + W + I S +
Sbjct: 339 DGLATWD--------------------NWKHVNCDKLTTI-----------IESS----L 363
Query: 568 VALDPN-----FRKLSIDAIVSAYLRSKSRAILFDYDGTVMPQT-SI--NKAPSQAVISI 619
L+P F +LS+ F + S+ V+ +
Sbjct: 364 NVLEPAEYRKMFDRLSV----------------FPPSAHIPTILLSLIWFDVIKSDVMVV 407
Query: 620 INTLCN 625
+N L
Sbjct: 408 VNKLHK 413
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 48.3 bits (114), Expect = 1e-05
Identities = 41/291 (14%), Positives = 89/291 (30%), Gaps = 84/291 (28%)
Query: 120 EQDDVSQLLLDRFKCVPAFLPPDILTKFYHGFCKQHLWPLFHYMLPFSATHG-GRFDRSL 178
D+V LLL C P LP ++ + P ++ S G +D
Sbjct: 299 TPDEVKSLLLKYLDCRPQDLPREV--------LTTN--PRRLSIIAESIRDGLATWDN-- 346
Query: 179 WEAYVSANKIFS--QRVIEVINPEDDYVWIHDYHLMVLPTFLRRRFTRLRMGFFLHSPFP 236
W+ +V+ +K+ + + + V+ P + R+ F RL + F + P
Sbjct: 347 WK-HVNCDKLTTIIESSLNVLEPAE----------------YRKMFDRLSV-FPPSAHIP 388
Query: 237 SS--EIYRTLPVREE---IL-----KALLNADLIGFHTFDYARHFLSCCS--------RM 278
+ + ++ + ++ +L+ + + R
Sbjct: 389 TILLSLIWFDVIKSDVMVVVNKLHKYSLVEKQPKESTISIPSIYLELKVKLENEYALHRS 448
Query: 279 LGLEYQSKR-------------GYIGLEYYGRTVGIKIMPVGIHMGQIE-----SVLRLA 320
+ Y + Y + G H+ IE ++ R+
Sbjct: 449 IVDHYNIPKTFDSDDLIPPYLDQYF-YSHIGH-----------HLKNIEHPERMTLFRMV 496
Query: 321 DKDWRVQELKQQFEGKTVLLGVDDMDIFKGVDLKLLAMEHLLKQHPKWQGR 371
D+R E K + + ++ + LK ++ PK++
Sbjct: 497 FLDFRFLEQKIRHDSTAWNASGSILNTLQ--QLKFYK-PYICDNDPKYERL 544
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 42.1 bits (98), Expect = 9e-04
Identities = 46/290 (15%), Positives = 86/290 (29%), Gaps = 98/290 (33%)
Query: 22 PSREKKRLPRVMTVPGVISELDDDQAN------SVSSDVPSSVAQDRVI--IVANQLPVK 73
P PR + +I+E D V+ D +I + P +
Sbjct: 319 PREVLTTNPRRL---SIIAESIRDGLATWDNWKHVNCD-----KLTTIIESSLNVLEPAE 370
Query: 74 AKRR-------PDN---------KGWSFSWDED-----------SLLLQLKDGLPEDMEV 106
++ P + W D SL+ K
Sbjct: 371 YRKMFDRLSVFPPSAHIPTILLSLIWFDVIKSDVMVVVNKLHKYSLVE--KQP---KEST 425
Query: 107 IYVGSLKVDVDLSEQDDVS--QLLLDRFKCVPAF----LPPDILTKFYHGFCKQHL---- 156
I + S+ +++ + +++ + + ++D + F L P L ++++ HL
Sbjct: 426 ISIPSIYLELKVKLENEYALHRSIVDHYNIPKTFDSDDLIPPYLDQYFYSHIGHHLKNIE 485
Query: 157 ----WPLF-HYMLPFSATHGGRF-------DRSLWEAYVSANKIFSQRVIEVINPEDDYV 204
LF L F RF D + W A S Q + Y+
Sbjct: 486 HPERMTLFRMVFLDF------RFLEQKIRHDSTAWNASGSILNTLQQ-----LKFYKPYI 534
Query: 205 WIHD--YHLMV--LPTFLRR--------RFTRL-RMGFFLHSPFPSSEIY 241
+D Y +V + FL + ++T L R+ I+
Sbjct: 535 CDNDPKYERLVNAILDFLPKIEENLICSKYTDLLRIALM----AEDEAIF 580
|
| >2fue_A PMM 1, PMMH-22, phosphomannomutase 1; enzyme-product complex, protein glycosyl carbohydrate-deficient glycoprotein syndrome; HET: MSE M1P; 1.75A {Homo sapiens} SCOP: c.108.1.10 PDB: 2fuc_A* Length = 262 | Back alignment and structure |
|---|
Score = 51.9 bits (123), Expect = 2e-07
Identities = 36/240 (15%), Positives = 67/240 (27%), Gaps = 38/240 (15%)
Query: 585 AYLRSKSRAILFDYDGTVMPQTSINKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGK 644
A R + LFD DGT+ P + V + + L + R + VV G + +
Sbjct: 7 AARRKERVLCLFDVDGTLTPA---RQKIDPEVAAFLQKLRS--RVQIGVVGGSDYCKIAE 61
Query: 645 WFSPCKKLGIAAEHGYFMRWSADEEWQNCGQSVDFGWIQIAEPVMKL-----------YT 693
++ ++ + + + E + L
Sbjct: 62 QLGDGDEVIEKFDYVFAENGTVQYKHGRLLSKQTIQNHLGEELLQDLINFCLSYMALLRL 121
Query: 694 ESTDGSYIEIKESALVWHHRDADPGFGSSQAKELLDHLESVLANEPAAVK---------- 743
G++IE + L LD E + A+K
Sbjct: 122 PKKRGTFIEFRNGMLNISPIGRSCTLEERIEFSELDKKEKIREKFVEALKTEFAGKGLRF 181
Query: 744 --SGQFIVEVKPQGVSKGVVAEKIFTTMAESGRHADFVLCIGDDRS----DEDMFEIIGN 797
G +V P+G K + + D + G++ S D ++F
Sbjct: 182 SRGGMISFDVFPEGWDKRYCLDSL------DQDSFDTIHFFGNETSPGGNDFEIFADPRT 235
|
| >3gyg_A NTD biosynthesis operon putative hydrolase NTDB; PF05116, PF08282, MCSG, PSI-2, haloacid dehalogenase-like HY structural genomics; 2.45A {Bacillus subtilis subsp} Length = 289 | Back alignment and structure |
|---|
Score = 46.7 bits (111), Expect = 1e-05
Identities = 36/247 (14%), Positives = 72/247 (29%), Gaps = 46/247 (18%)
Query: 594 ILFDYDGTVMPQTSINKAPSQAVISIINTLCNDARN---TVFVVSGRGRDCLGKWFSPCK 650
+ D+D T P T I++ Q + + + L +++ + V+G + +
Sbjct: 25 VFCDFDETYFPHT-IDEQKQQDIYELEDYLEQKSKDGELIIGWVTGSSIESI---LDKMG 80
Query: 651 KLGIAAEHGYFM--------------RWSADEEWQNC------GQSVDFGWIQIAEPVMK 690
+ + D +W + + V+ Q+ E
Sbjct: 81 RGKFRYFPHFIASDLGTEITYFSEHNFGQQDNKWNSRINEGFSKEKVEKLVKQLHENHNI 140
Query: 691 LYTESTDGSYIEIKESALVWHHRDADPGFGSSQAKELLDHLE----SVLANEPAAVKSGQ 746
L T K + + + +++ + N A
Sbjct: 141 LLNPQTQLGKSRYKHNFYYQEQDEINDKKNLLAIEKICEEYGVSVNINRCNPLAGDPEDS 200
Query: 747 FIVEVKPQGVSKGV----VAEKIFTTMAESGRHADFVLCIGDDRSDEDMFEIIGNATSSG 802
+ V+ P G K + EK + GD +D M + +GN G
Sbjct: 201 YDVDFIPIGTGKNEIVTFMLEKYNLNTER-------AIAFGDSGNDVRMLQTVGN----G 249
Query: 803 VLSSNAS 809
L NA+
Sbjct: 250 YLLKNAT 256
|
| >3oy2_A Glycosyltransferase B736L; rossmann fold, GDP-mannose, sugar, VIRU proteins, viral protein,transferase; 2.31A {Paramecium bursaria chlorella virus NY} PDB: 3oy7_A* Length = 413 | Back alignment and structure |
|---|
Score = 47.1 bits (111), Expect = 2e-05
Identities = 37/300 (12%), Positives = 86/300 (28%), Gaps = 25/300 (8%)
Query: 240 IYRTLPVREEILKALLNADLIGFHTFDYARH-----FLSCCSRMLGLEYQSKRGYIGLEY 294
+ K ++ + ++ +++G+ SK +
Sbjct: 91 PIVIGNYLLAMGKCSHRTKIVLYVDLVSKNIRENLWWIFSHPKVVGVMAMSKCWISDICN 150
Query: 295 YGRTVGIKIMPVGIHMGQIESVLRLADKDWRVQELKQQFEGKTVLLGVDDMDIFKGVDLK 354
YG V I I+ + I D R ++ + L ++ K +D+
Sbjct: 151 YGCKVPINIVSHFVDTKTI--------YDARKLVGLSEYNDDVLFLNMNRNTARKRLDIY 202
Query: 355 LLAMEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPV 414
+LA + ++P + + + N DL I N +
Sbjct: 203 VLAAARFISKYPDAK----VRFLCNSHHESKFDLHSIALRELVASGVDNVFTHLNK---I 255
Query: 415 VFIDKPVTLSERAAYYTIAECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSS--ESSAPK 472
+ +T Y + +V + +G L E V + + S + +
Sbjct: 256 MINRTVLTDERVDMMYNACDVIVNCSSGEGFGLCSAEGAVLGKPLIISAVGGADDYFSGD 315
Query: 473 KSMLVVSEFIGCSPSLSGAIRVNPW-NIEATAEAMHEAIQMNEAEKQLRHEKHYRYVSTH 531
+ G + +++ EA +E ++ ++ +V T
Sbjct: 316 CVYKIKPSAWISVDDRDGIGGIEGIIDVDDLVEAF--TFFKDEKNRKEYGKRVQDFVKTK 373
|
| >1xvi_A MPGP, YEDP, putative mannosyl-3-phosphoglycerate phosphatase; hypothetical protein, conserved protein, phophatase-like domain; HET: 1PE PG4 PGE; 2.26A {Escherichia coli K12} SCOP: c.108.1.10 Length = 275 | Back alignment and structure |
|---|
Score = 45.0 bits (106), Expect = 4e-05
Identities = 33/256 (12%), Positives = 66/256 (25%), Gaps = 30/256 (11%)
Query: 590 KSRAILFDYDGTVM-PQTSINKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSP 648
+ + D DGT++ + Q + L +A V + S + +
Sbjct: 8 QPLLVFSDLDGTLLDSHSYD----WQPAAPWLTRL-REANVPVILCSSKTSAEMLYLQKT 62
Query: 649 CKKLG--IAAEHGYFMRWSADEEWQNCGQSVDFG--WIQIAEPVMKLYTESTDGSYIEIK 704
G + AE+G ++ + + + + G +I+ + L +
Sbjct: 63 LGLQGLPLIAENGAVIQLAEQWQEIDGFPRIISGISHGEISLVLNTLREKEHFKFTTFDD 122
Query: 705 ESALVWHHRDADPGFGSSQA--------------KELLDHLESVLANEPAAVKSGQFIVE 750
++ E + + L G
Sbjct: 123 VDDATIAEWTGLSRSQAALTQLHEASVTLIWRDSDERMAQFTARLNELGLQFMQGARFWH 182
Query: 751 VKPQGVSKGVVAEKIFTTMAESGRHADFVLCIGDDRSDEDMFE------IIGNATSSGVL 804
V K A I T + L +GD +D + E I+ GV
Sbjct: 183 VLDASAGKDQAANWIIATYQQLSGKRPTTLGLGDGPNDAPLLEVMDYAVIVKGLNREGVH 242
Query: 805 SSNASVFACTVGQKPS 820
+ Q+
Sbjct: 243 LHDEDPARVWRTQREG 258
|
| >2x6q_A Trehalose-synthase TRET; biosynthetic protein; 2.20A {Pyrococcus horikoshii} PDB: 2x6r_A 2xa1_A 2xa2_A* 2xa9_A* 2xmp_A* Length = 416 | Back alignment and structure |
|---|
Score = 44.3 bits (105), Expect = 1e-04
Identities = 45/289 (15%), Positives = 91/289 (31%), Gaps = 60/289 (20%)
Query: 170 HGGRFDRSLWEAYVSANKIFSQRVIEVINPEDDYVWIHDYHLMVLPTFLRRRF---TRLR 226
+ + E Y++ N+ S + I++ + DYV +HD L F ++ R
Sbjct: 99 ESLKLTEEMKELYLNVNRENS-KFIDLSSF--DYVLVHDPQPAALIEFYEKKSPWLWRCH 155
Query: 227 MGFFLHSPFPSSEIYRTLPVREEILKALLNADLIGFHTFDYARHFLSCCSRMLGLEYQSK 286
+ + + R + + ++ + E
Sbjct: 156 IDLSSPNREFWEFLRRFV---------------------EKYDRYIFHLPEYVQPELDRN 194
Query: 287 RGYIGLEYYGRTVGIKIMPVGIHMGQIESVLRLADKDWRVQELKQQF---EGKTVLLGVD 343
+ IMP I S + K + + ++F K ++ V
Sbjct: 195 K-------------AVIMPPSID---PLSEKNVELKQTEILRILERFDVDPEKPIITQVS 238
Query: 344 DMDIFKGVDLKLLAMEHLLKQHPKWQGRAVLVQIANPARGRG-KDLEEIQAEIHATCKRI 402
D +KG+ + + ++ P Q +LV G D E T ++I
Sbjct: 239 RFDPWKGIFDVIEIYRKVKEKIPGVQ--LLLV-------GVMAHDDPEGWIYFEKTLRKI 289
Query: 403 NETFGRPGYEPVVFIDKPVTLSERAAYYTIAECVVVTAVRDGMNLTPYE 451
E + I E A+ ++ ++ ++R+G LT E
Sbjct: 290 GEDYD--VKVLTNLIGVHA--REVNAFQRASDVILQMSIREGFGLTVTE 334
|
| >1s2o_A SPP, sucrose-phosphatase; phosphohydrolase, HAD superfamily, cyanobacteria; 1.40A {Synechocystis SP} SCOP: c.108.1.10 PDB: 1tj3_A 1tj4_A* 1tj5_A* 1u2s_A* 1u2t_A* 2b1q_A* 2b1r_A* 2d2v_A* Length = 244 | Back alignment and structure |
|---|
Score = 42.6 bits (101), Expect = 2e-04
Identities = 37/239 (15%), Positives = 74/239 (30%), Gaps = 56/239 (23%)
Query: 592 RAILFDYDGTVMPQTSINKAPSQAVISIINTLCNDARNTVFVV--SGRGRDCLGKWFSPC 649
++ D D T + Q + + D R ++ +GR +
Sbjct: 4 LLLISDLDNTWVG--------DQQALEHLQEYLGDRRGNFYLAYATGRSYHSARELQ--- 52
Query: 650 KKLGIAAEHGY--------FMRWSADEEWQN-CGQSVDFGWIQIAE---PVMKLYTESTD 697
K++G+ + + D+ W + + +Q +K +
Sbjct: 53 KQVGLMEPDYWLTAVGSEIYHPEGLDQHWADYLSEHWQRDILQAIADGFEALKPQSPLEQ 112
Query: 698 GSYIEIKESALVWHHRDADPGFGSSQAKELLDHLESVLANEPAAVK---SGQFIVEVKPQ 754
+ K S +H ++D L +L V+ S V++ PQ
Sbjct: 113 NPW---KIS---YHLDPQA-------CPTVIDQLTEMLKETGIPVQVIFSSGKDVDLLPQ 159
Query: 755 GVSKGV----VAEKIFTTMAESGRHADFVLCIGDDRSDEDMFEIIGNATSSGVLSSNAS 809
+KG + + + ++ L GD +D +FE GV+ NA
Sbjct: 160 RSNKGNATQYLQQHLAMEPSQ-------TLVCGDSGNDIGLFETSAR----GVIVRNAQ 207
|
| >1l6r_A Hypothetical protein TA0175; structural genomics, putative hydrolas midwest center for structural genomics, MCSG, PSI; 1.40A {Thermoplasma acidophilum} SCOP: c.108.1.10 PDB: 1kyt_A Length = 227 | Back alignment and structure |
|---|
Score = 42.1 bits (100), Expect = 3e-04
Identities = 39/213 (18%), Positives = 65/213 (30%), Gaps = 43/213 (20%)
Query: 592 RAILFDYDGTVMPQTSINKAPSQAVISIINTLCNDARN---TVFVVSGRGRDCLGKWFSP 648
R D DG + T ++ S I I A TV ++SG +
Sbjct: 6 RLAAIDVDGNL---TDRDRLISTKAIESIR----SAEKKGLTVSLLSGNVIPVVYALK-- 56
Query: 649 CKKLG----IAAEHGYFMRWSADEEWQNCGQSVDFGWIQIAEPVMKLYTESTDGSYIEIK 704
LG + E+G M + N G F + ++ ++ T I
Sbjct: 57 -IFLGINGPVFGENGGIM-------FDNDGSIKKFFSNEGTNKFLEEMSKRTSMRSILTN 108
Query: 705 ESALVWHHRDADPGFGSSQAKELLDHLESVLANEPAAVKSGQFIVEVKPQGVSKGV---- 760
D DP E +D++ + + + + +G K
Sbjct: 109 RWREASTGFDIDP--------EDVDYVRKEAESRGFVIFYSGYSWHLMNRGEDKAFAVNK 160
Query: 761 VAEKIFTTMAESGRHADFVLCIGDDRSDEDMFE 793
+ E E +L IGD +D MF+
Sbjct: 161 LKEMYSLEYDE-------ILVIGDSNNDMPMFQ 186
|
| >2amy_A PMM 2, phosphomannomutase 2; HS.459855, HS.313504, BC008310, phosphatase, PFAM PF03332, H superfamily, jaecken disease; 2.09A {Homo sapiens} SCOP: c.108.1.10 PDB: 2q4r_A Length = 246 | Back alignment and structure |
|---|
Score = 41.8 bits (97), Expect = 5e-04
Identities = 32/235 (13%), Positives = 62/235 (26%), Gaps = 36/235 (15%)
Query: 588 RSKSRAILFDYDGTVMPQTSINKAPSQAVISIINTLCNDARNTVFVVSGRGRD-----CL 642
LFD DGT+ T+ + ++ + + L + + VV G +
Sbjct: 3 APGPALCLFDVDGTL---TAPRQKITKEMDDFLQKLRQ--KIKIGVVGGSDFEKVQEQLG 57
Query: 643 GKWFSPCK----KLGIAAEHGYFMRWSADEEWQNCGQSVDFGWIQIAEPVMKLYTESTDG 698
+ G+ A + + + + + K+ G
Sbjct: 58 NDVVEKYDYVFPENGLVAYKDGKLLCRQNIQSHLGEALIQDLINYCLSYIAKIKLPKKRG 117
Query: 699 SYIEIKESALVWHHRDADPGFGSSQAKELLDHLESVLANEPAAVK------------SGQ 746
++IE + L LD E++ A ++ GQ
Sbjct: 118 TFIEFRNGMLNVSPIGRSCSQEERIEFYELDKKENIRQKFVADLRKEFAGKGLTFSIGGQ 177
Query: 747 FIVEVKPQGVSKGVVAEKIFTTMAESGRHADFVLCIGDDRS----DEDMFEIIGN 797
+V P G K + + GD D ++F
Sbjct: 178 ISFDVFPDGWDKRYCLRHV------ENDGYKTIYFFGDKTMPGGNDHEIFTDPRT 226
|
| >2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A* Length = 413 | Back alignment and structure |
|---|
Score = 42.5 bits (99), Expect = 5e-04
Identities = 20/227 (8%), Positives = 57/227 (25%), Gaps = 47/227 (20%)
Query: 321 DKDWRVQELKQQFEGKTVLLGVDDMDIFKGVDLKLLAMEHLLKQHPKWQGRAVLVQIANP 380
+ + ++ + K +L+ L + A++ ++++ + +
Sbjct: 227 NTTLKNYINDKRQKEKIILVYGRPSVKRNAFTLIVEALKIFVQKYD--RSNEWKIISV-- 282
Query: 381 ARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDKPVTLSERAAYYTIAECVVVTA 440
G + IH +TL + A + +
Sbjct: 283 --GEKHKDIALGKGIHLNSLG------------------KLTLEDYADLLKRSSIGISLM 322
Query: 441 VRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIGCSPSLS---GAIRVNPW 497
+ + P E G+ V++ + + +
Sbjct: 323 ISPHPSYPPLEMAHF--GL----------------RVITNKYENKDLSNWHSNIVSLEQL 364
Query: 498 NIEATAEAMHEAIQMNEAEKQLRH--EKHYRYVSTHDVAYWARSFFQ 542
N E AE + E + Y++ + + + +
Sbjct: 365 NPENIAETLVELCMSFNNRDVDKKESSNMMFYINEFNEFSFIKEIEE 411
|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 856 | |||
| 3t5t_A | 496 | Putative glycosyltransferase; GTB fold, pseudoglyc | 100.0 | |
| 1uqt_A | 482 | Alpha, alpha-trehalose-phosphate synthase; glycosy | 100.0 | |
| 1u02_A | 239 | Trehalose-6-phosphate phosphatase related protein; | 99.96 | |
| 3dao_A | 283 | Putative phosphatse; structural genomics, joint ce | 99.94 | |
| 3pgv_A | 285 | Haloacid dehalogenase-like hydrolase; structural g | 99.94 | |
| 3l7y_A | 304 | Putative uncharacterized protein SMU.1108C; hydrol | 99.93 | |
| 3fro_A | 439 | GLGA glycogen synthase; glycosyltransferase family | 99.93 | |
| 4dw8_A | 279 | Haloacid dehalogenase-like hydrolase; HAD, putativ | 99.93 | |
| 3dnp_A | 290 | Stress response protein YHAX; structural PSI-2, pr | 99.92 | |
| 3fzq_A | 274 | Putative hydrolase; YP_001086940.1, putative haloa | 99.92 | |
| 1rlm_A | 271 | Phosphatase; HAD family, rossman fold, hydrolase; | 99.92 | |
| 3r4c_A | 268 | Hydrolase, haloacid dehalogenase-like hydrolase; h | 99.91 | |
| 3mpo_A | 279 | Predicted hydrolase of the HAD superfamily; SGX, P | 99.91 | |
| 1rkq_A | 282 | Hypothetical protein YIDA; two domain structure wi | 99.91 | |
| 2pq0_A | 258 | Hypothetical conserved protein GK1056; hyopthetica | 99.91 | |
| 2b30_A | 301 | Pvivax hypothetical protein; SGPP, structural geno | 99.91 | |
| 1nf2_A | 268 | Phosphatase; structural proteomics, HAD NEW fold, | 99.9 | |
| 2fue_A | 262 | PMM 1, PMMH-22, phosphomannomutase 1; enzyme-produ | 99.9 | |
| 1xvi_A | 275 | MPGP, YEDP, putative mannosyl-3-phosphoglycerate p | 99.9 | |
| 3vue_A | 536 | GBSS-I, granule-bound starch synthase 1, chloropla | 99.89 | |
| 3c48_A | 438 | Predicted glycosyltransferases; retaining glycosyl | 99.89 | |
| 3f9r_A | 246 | Phosphomannomutase; trypanosome glycobiology struc | 99.89 | |
| 1nrw_A | 288 | Hypothetical protein, haloacid dehalogenase-like h | 99.89 | |
| 2amy_A | 246 | PMM 2, phosphomannomutase 2; HS.459855, HS.313504, | 99.89 | |
| 3okp_A | 394 | GDP-mannose-dependent alpha-(1-6)-phosphatidylino | 99.89 | |
| 2r60_A | 499 | Glycosyl transferase, group 1; rossmann-fold; 1.80 | 99.89 | |
| 1l6r_A | 227 | Hypothetical protein TA0175; structural genomics, | 99.89 | |
| 1wr8_A | 231 | Phosphoglycolate phosphatase; alpha / beta core do | 99.88 | |
| 2qzs_A | 485 | Glycogen synthase; glycosyl-transferase, GT-B fold | 99.88 | |
| 1s2o_A | 244 | SPP, sucrose-phosphatase; phosphohydrolase, HAD su | 99.88 | |
| 2x6q_A | 416 | Trehalose-synthase TRET; biosynthetic protein; 2.2 | 99.88 | |
| 3oy2_A | 413 | Glycosyltransferase B736L; rossmann fold, GDP-mann | 99.88 | |
| 2rbk_A | 261 | Putative uncharacterized protein; HAD-like phospha | 99.88 | |
| 1rzu_A | 485 | Glycogen synthase 1; glycosyl-transferase, GT-B fo | 99.88 | |
| 2jjm_A | 394 | Glycosyl transferase, group 1 family protein; anth | 99.87 | |
| 2gek_A | 406 | Phosphatidylinositol mannosyltransferase (PIMA); G | 99.87 | |
| 3s28_A | 816 | Sucrose synthase 1; glycosyltransferase, sucrose m | 99.86 | |
| 2zos_A | 249 | MPGP, mannosyl-3-phosphoglycerate phosphatase; hal | 99.86 | |
| 3nb0_A | 725 | Glycogen [starch] synthase isoform 2; glycogen syn | 99.85 | |
| 3zx4_A | 259 | MPGP, mannosyl-3-phosphoglycerate phosphatase; hyd | 99.85 | |
| 2bfw_A | 200 | GLGA glycogen synthase; glycosyltransferase family | 99.81 | |
| 2iuy_A | 342 | Avigt4, glycosyltransferase; antibiotics, family G | 99.8 | |
| 2iw1_A | 374 | Lipopolysaccharide core biosynthesis protein RFAG; | 99.78 | |
| 3gyg_A | 289 | NTD biosynthesis operon putative hydrolase NTDB; P | 99.78 | |
| 3qhp_A | 166 | Type 1 capsular polysaccharide biosynthesis prote | 99.74 | |
| 1vgv_A | 384 | UDP-N-acetylglucosamine 2-epimerase; structural ge | 99.68 | |
| 2x0d_A | 413 | WSAF; GT4 family, transferase; HET: MSE; 2.28A {Ge | 99.67 | |
| 3beo_A | 375 | UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, a | 99.67 | |
| 2hy7_A | 406 | Glucuronosyltransferase GUMK; glycosyltransferases | 99.66 | |
| 2f9f_A | 177 | First mannosyl transferase (WBAZ-1); alpha-beta pr | 99.63 | |
| 1v4v_A | 376 | UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, t | 99.56 | |
| 2vsy_A | 568 | XCC0866; transferase, glycosyl transferase, GT-B, | 99.55 | |
| 1f0k_A | 364 | MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pe | 99.51 | |
| 2xci_A | 374 | KDO-transferase, 3-deoxy-D-manno-2-octulosonic aci | 99.47 | |
| 3pdw_A | 266 | Uncharacterized hydrolase YUTF; structural genomic | 99.43 | |
| 3dzc_A | 396 | UDP-N-acetylglucosamine 2-epimerase; structural ge | 99.41 | |
| 3qgm_A | 268 | P-nitrophenyl phosphatase (PHO2); structural genom | 99.4 | |
| 1k1e_A | 180 | Deoxy-D-mannose-octulosonate 8-phosphate phosphat; | 99.39 | |
| 1vjr_A | 271 | 4-nitrophenylphosphatase; TM1742, structural genom | 99.36 | |
| 2x4d_A | 271 | HLHPP, phospholysine phosphohistidine inorganic py | 99.36 | |
| 2c4n_A | 250 | Protein NAGD; nucleotide phosphatase, HAD superfam | 99.35 | |
| 3epr_A | 264 | Hydrolase, haloacid dehalogenase-like family; stru | 99.29 | |
| 3ot5_A | 403 | UDP-N-acetylglucosamine 2-epimerase; structural ge | 99.28 | |
| 1y8a_A | 332 | Hypothetical protein AF1437; structural genomics, | 99.26 | |
| 3ewi_A | 168 | N-acylneuraminate cytidylyltransferase; beta barre | 99.22 | |
| 2p9j_A | 162 | Hypothetical protein AQ2171; secsg, riken, PSI, st | 99.2 | |
| 3mmz_A | 176 | Putative HAD family hydrolase; structural genomics | 99.19 | |
| 2r8e_A | 188 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphata | 99.16 | |
| 2ho4_A | 259 | Haloacid dehalogenase-like hydrolase domain contai | 99.12 | |
| 3e8m_A | 164 | Acylneuraminate cytidylyltransferase; 2-keto-3-deo | 99.11 | |
| 3n07_A | 195 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; | 99.11 | |
| 3mn1_A | 189 | Probable YRBI family phosphatase; structural genom | 99.1 | |
| 2oyc_A | 306 | PLP phosphatase, pyridoxal phosphate phosphatase; | 99.1 | |
| 3kzx_A | 231 | HAD-superfamily hydrolase, subfamily IA, variant; | 99.09 | |
| 3n1u_A | 191 | Hydrolase, HAD superfamily, subfamily III A; struc | 99.09 | |
| 1l7m_A | 211 | Phosphoserine phosphatase; rossmann fold, four-hel | 99.08 | |
| 3mc1_A | 226 | Predicted phosphatase, HAD family; PSI2, NYSGXRC, | 99.05 | |
| 4ex6_A | 237 | ALNB; modified rossman fold, phosphatase, magnesiu | 99.04 | |
| 3ij5_A | 211 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; | 99.04 | |
| 3l8h_A | 179 | Putative haloacid dehalogenase-like hydrolase; HAD | 99.03 | |
| 3u26_A | 234 | PF00702 domain protein; structural genomics, PSI-b | 99.02 | |
| 3kd3_A | 219 | Phosphoserine phosphohydrolase-like protein; csgid | 98.98 | |
| 1swv_A | 267 | Phosphonoacetaldehyde hydrolase; HAD enzyme superf | 98.96 | |
| 3dv9_A | 247 | Beta-phosphoglucomutase; structural genomics, APC6 | 98.94 | |
| 3m9l_A | 205 | Hydrolase, haloacid dehalogenase-like family; HAD | 98.94 | |
| 2hcf_A | 234 | Hydrolase, haloacid dehalogenase-like family; NP_6 | 98.93 | |
| 3iru_A | 277 | Phoshonoacetaldehyde hydrolase like protein; phosp | 98.92 | |
| 3qxg_A | 243 | Inorganic pyrophosphatase; hydrolase, magnesium bi | 98.91 | |
| 3d6j_A | 225 | Putative haloacid dehalogenase-like hydrolase; str | 98.9 | |
| 2wf7_A | 221 | Beta-PGM, beta-phosphoglucomutase; transition stat | 98.89 | |
| 2gmw_A | 211 | D,D-heptose 1,7-bisphosphate phosphatase; Zn-bindi | 98.88 | |
| 3vay_A | 230 | HAD-superfamily hydrolase; rossmann fold, haloacid | 98.88 | |
| 3m1y_A | 217 | Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, | 98.87 | |
| 2fdr_A | 229 | Conserved hypothetical protein; SAD, structural ge | 98.87 | |
| 2om6_A | 235 | Probable phosphoserine phosphatase; rossmann fold, | 98.85 | |
| 1yv9_A | 264 | Hydrolase, haloacid dehalogenase family; hypotheti | 98.84 | |
| 2go7_A | 207 | Hydrolase, haloacid dehalogenase-like family; stru | 98.84 | |
| 2no4_A | 240 | (S)-2-haloacid dehalogenase IVA; HAD superfamily, | 98.83 | |
| 3s6j_A | 233 | Hydrolase, haloacid dehalogenase-like family; stru | 98.82 | |
| 1te2_A | 226 | Putative phosphatase; structural genomics, phospha | 98.81 | |
| 3sd7_A | 240 | Putative phosphatase; structural genomics, haloaci | 98.79 | |
| 2pib_A | 216 | Phosphorylated carbohydrates phosphatase TM_1254; | 98.78 | |
| 3nas_A | 233 | Beta-PGM, beta-phosphoglucomutase; PSI, structural | 98.77 | |
| 2wm8_A | 187 | MDP-1, magnesium-dependent phosphatase 1; haloacid | 98.77 | |
| 2pke_A | 251 | Haloacid delahogenase-like family hydrolase; NP_63 | 98.76 | |
| 4ap9_A | 201 | Phosphoserine phosphatase; hydrolase, haloacid deh | 98.74 | |
| 3ed5_A | 238 | YFNB; APC60080, bacillus subtilis subsp. subtilis | 98.74 | |
| 1zjj_A | 263 | Hypothetical protein PH1952; alpha/beta hydrolase | 98.74 | |
| 4eek_A | 259 | Beta-phosphoglucomutase-related protein; hydrolase | 98.72 | |
| 3um9_A | 230 | Haloacid dehalogenase, type II; haloacid dehalogen | 98.72 | |
| 2qlt_A | 275 | (DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, sac | 98.71 | |
| 3e58_A | 214 | Putative beta-phosphoglucomutase; structu genomics | 98.7 | |
| 3umc_A | 254 | Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeru | 98.7 | |
| 2o2x_A | 218 | Hypothetical protein; structural genomics, joint c | 98.7 | |
| 3nuq_A | 282 | Protein SSM1, putative nucleotide phosphatase; sup | 98.68 | |
| 2ah5_A | 210 | COG0546: predicted phosphatases; MCSG, structural | 98.68 | |
| 3umb_A | 233 | Dehalogenase-like hydrolase; 2.20A {Ralstonia sola | 98.67 | |
| 1qq5_A | 253 | Protein (L-2-haloacid dehalogenase); hydrolase; 1. | 98.65 | |
| 3skx_A | 280 | Copper-exporting P-type ATPase B; P1B-ATPase, ATP | 98.64 | |
| 3umg_A | 254 | Haloacid dehalogenase; defluorinase, hydrolase; 2. | 98.64 | |
| 2hi0_A | 240 | Putative phosphoglycolate phosphatase; YP_619066.1 | 98.63 | |
| 2oda_A | 196 | Hypothetical protein pspto_2114; haloacid dehaloge | 98.62 | |
| 3l5k_A | 250 | Protein GS1, haloacid dehalogenase-like hydrolase | 98.62 | |
| 1zrn_A | 232 | L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseud | 98.62 | |
| 3ddh_A | 234 | Putative haloacid dehalogenase-like family hydrol; | 98.59 | |
| 4hwg_A | 385 | UDP-N-acetylglucosamine 2-epimerase; ssgcid, struc | 98.57 | |
| 2hoq_A | 241 | Putative HAD-hydrolase PH1655; haloacid dehalogena | 98.56 | |
| 2hdo_A | 209 | Phosphoglycolate phosphatase; NP_784602.1, structu | 98.54 | |
| 3n28_A | 335 | Phosphoserine phosphatase; HAD family hydrolase, s | 98.51 | |
| 3smv_A | 240 | S-(-)-azetidine-2-carboxylate hydrolase; haloacid | 98.49 | |
| 3ib6_A | 189 | Uncharacterized protein; structural genomics, unkn | 98.49 | |
| 2obb_A | 142 | Hypothetical protein; structural genomics, PSI-2, | 98.49 | |
| 2hsz_A | 243 | Novel predicted phosphatase; structural genomics, | 98.48 | |
| 2nyv_A | 222 | Pgpase, PGP, phosphoglycolate phosphatase; structu | 98.47 | |
| 3rhz_A | 339 | GTF3, nucleotide sugar synthetase-like protein; gl | 98.46 | |
| 2w43_A | 201 | Hypothetical 2-haloalkanoic acid dehalogenase; hyd | 98.45 | |
| 3qnm_A | 240 | Haloacid dehalogenase-like hydrolase; structural g | 98.42 | |
| 4gib_A | 250 | Beta-phosphoglucomutase; rossmann fold, HAD-like, | 98.42 | |
| 3fvv_A | 232 | Uncharacterized protein; unknown function, structu | 98.42 | |
| 3k1z_A | 263 | Haloacid dehalogenase-like hydrolase domain-conta | 98.4 | |
| 2pr7_A | 137 | Haloacid dehalogenase/epoxide hydrolase family; NP | 98.38 | |
| 3a1c_A | 287 | Probable copper-exporting P-type ATPase A; ATP-bin | 98.36 | |
| 4eze_A | 317 | Haloacid dehalogenase-like hydrolase; magnesium bi | 98.31 | |
| 3j08_A | 645 | COPA, copper-exporting P-type ATPase A; copper tra | 98.29 | |
| 3kbb_A | 216 | Phosphorylated carbohydrates phosphatase TM_1254; | 98.26 | |
| 3p96_A | 415 | Phosphoserine phosphatase SERB; ssgcid, structural | 98.24 | |
| 3j09_A | 723 | COPA, copper-exporting P-type ATPase A; copper tra | 98.23 | |
| 2hx1_A | 284 | Predicted sugar phosphatases of the HAD superfamil | 98.23 | |
| 2fi1_A | 190 | Hydrolase, haloacid dehalogenase-like family; stru | 98.22 | |
| 1xpj_A | 126 | Hypothetical protein; structural genomics, MCSG, p | 98.19 | |
| 3rfu_A | 736 | Copper efflux ATPase; alpha helical, CPC, CXXC, AT | 98.12 | |
| 1nnl_A | 225 | L-3-phosphoserine phosphatase; PSP, HPSP, phospho- | 98.11 | |
| 3otg_A | 412 | CALG1; calicheamicin, TDP, structural genomics, PS | 98.03 | |
| 3ixz_A | 1034 | Potassium-transporting ATPase alpha; ION pump, H+, | 98.01 | |
| 2b0c_A | 206 | Putative phosphatase; alpha-D-glucose-1-phosphate, | 97.94 | |
| 3nvb_A | 387 | Uncharacterized protein; protein FKBH, protein fkb | 97.93 | |
| 1l5w_A | 796 | Maltodextrin phosphorylase; enzymatic catalysis, s | 97.9 | |
| 3cnh_A | 200 | Hydrolase family protein; NP_295428.1, predicted h | 97.89 | |
| 1rku_A | 206 | Homoserine kinase; phosphoserine phosphatase, phos | 97.89 | |
| 3q3e_A | 631 | HMW1C-like glycosyltransferase; N-glycosylation; 2 | 97.85 | |
| 4g9b_A | 243 | Beta-PGM, beta-phosphoglucomutase; HAD, putative p | 97.81 | |
| 2c4m_A | 796 | Glycogen phosphorylase; allosteric control, phosph | 97.77 | |
| 4dcc_A | 229 | Putative haloacid dehalogenase-like hydrolase; mag | 97.74 | |
| 3kc2_A | 352 | Uncharacterized protein YKR070W; HAD-like, mitocho | 97.72 | |
| 2fpr_A | 176 | Histidine biosynthesis bifunctional protein HISB; | 97.71 | |
| 4fzr_A | 398 | SSFS6; structural genomics, PSI-biology, protein s | 97.7 | |
| 2gj4_A | 824 | Glycogen phosphorylase, muscle form; transferase; | 97.66 | |
| 3tsa_A | 391 | SPNG, NDP-rhamnosyltransferase; glycosyltransferas | 97.45 | |
| 2i33_A | 258 | Acid phosphatase; HAD superfamily, hydrolase; 1.57 | 97.41 | |
| 2iyf_A | 430 | OLED, oleandomycin glycosyltransferase; antibiotic | 97.4 | |
| 2zxe_A | 1028 | Na, K-ATPase alpha subunit; membrane protein, ION | 97.29 | |
| 3ar4_A | 995 | Sarcoplasmic/endoplasmic reticulum calcium ATPase; | 97.12 | |
| 2yj3_A | 263 | Copper-transporting ATPase; hydrolase, P-type ATPa | 96.18 | |
| 2o6l_A | 170 | UDP-glucuronosyltransferase 2B7; drug metabolism, | 97.02 | |
| 2p6p_A | 384 | Glycosyl transferase; X-RAY-diffraction,urdamycina | 96.98 | |
| 3zvl_A | 416 | Bifunctional polynucleotide phosphatase/kinase; hy | 96.93 | |
| 1mhs_A | 920 | Proton pump, plasma membrane ATPase; ION transport | 96.86 | |
| 3s2u_A | 365 | UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape | 96.79 | |
| 2b82_A | 211 | APHA, class B acid phosphatase; DDDD acid phosphat | 96.73 | |
| 3i28_A | 555 | Epoxide hydrolase 2; aromatic hydrocarbons catabol | 96.73 | |
| 3b8c_A | 885 | ATPase 2, plasma membrane-type; P-type ATPase, pro | 96.39 | |
| 1ltq_A | 301 | Polynucleotide kinase; phosphatase, alpha/beta, P- | 95.9 | |
| 3ia7_A | 402 | CALG4; glycosysltransferase, calicheamicin, enediy | 95.87 | |
| 3rsc_A | 415 | CALG2; TDP, enediyne, structural genomics, PSI-2, | 95.82 | |
| 2yjn_A | 441 | ERYCIII, glycosyltransferase; transferase, cytochr | 95.73 | |
| 2i7d_A | 193 | 5'(3')-deoxyribonucleotidase, cytosolic type; hydr | 95.42 | |
| 3oti_A | 398 | CALG3; calicheamicin, TDP, structural genomics, PS | 95.37 | |
| 2gfh_A | 260 | Haloacid dehalogenase-like hydrolase domain conta; | 95.17 | |
| 3ocu_A | 262 | Lipoprotein E; hydrolase, outer membrane; HET: NMN | 94.97 | |
| 3pct_A | 260 | Class C acid phosphatase; hydrolase, outer membran | 94.87 | |
| 2i6x_A | 211 | Hydrolase, haloacid dehalogenase-like family; HAD | 94.79 | |
| 2fea_A | 236 | 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate | 94.53 | |
| 1iir_A | 415 | Glycosyltransferase GTFB; rossmann fold; 1.80A {Am | 92.19 | |
| 2iya_A | 424 | OLEI, oleandomycin glycosyltransferase; carbohydra | 92.11 | |
| 2fea_A | 236 | 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate | 90.89 | |
| 4gyw_A | 723 | UDP-N-acetylglucosamine--peptide N- acetylglucosam | 90.41 | |
| 1rrv_A | 416 | Glycosyltransferase GTFD; GT-B, glycosyltransferas | 89.43 | |
| 2hhl_A | 195 | CTD small phosphatase-like protein; CTD phosphatas | 88.2 | |
| 3h4t_A | 404 | Glycosyltransferase GTFA, glycosyltransferase; van | 88.04 | |
| 1qyi_A | 384 | ZR25, hypothetical protein; structural genomics, P | 87.83 | |
| 2ght_A | 181 | Carboxy-terminal domain RNA polymerase II polypept | 86.78 | |
| 2p11_A | 231 | Hypothetical protein; putative haloacid dehalogena | 85.94 | |
| 2gfh_A | 260 | Haloacid dehalogenase-like hydrolase domain conta; | 85.87 | |
| 2zg6_A | 220 | Putative uncharacterized protein ST2620, probable | 85.59 | |
| 1yns_A | 261 | E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo | 84.99 | |
| 4amg_A | 400 | Snogd; transferase, polyketide biosynthesis, GT1 f | 84.98 | |
| 2p11_A | 231 | Hypothetical protein; putative haloacid dehalogena | 84.94 | |
| 4gxt_A | 385 | A conserved functionally unknown protein; structur | 83.47 | |
| 2i6x_A | 211 | Hydrolase, haloacid dehalogenase-like family; HAD | 82.74 | |
| 2zg6_A | 220 | Putative uncharacterized protein ST2620, probable | 82.24 | |
| 1q92_A | 197 | 5(3)-deoxyribonucleotidase; alpha-beta rossman fol | 80.67 | |
| 2g80_A | 253 | Protein UTR4; YEL038W, UTR4 protein (unknown trans | 80.39 | |
| 3bwv_A | 180 | Putative 5'(3')-deoxyribonucleotidase; NP_764060.1 | 80.1 |
| >3t5t_A Putative glycosyltransferase; GTB fold, pseudoglycosyltransferase; 1.70A {Streptomyces hygroscopicus} PDB: 4f97_A* 4f96_B* 4f9f_A* 3t7d_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-107 Score=934.01 Aligned_cols=460 Identities=16% Similarity=0.284 Sum_probs=406.5
Q ss_pred CCeEEEEEcCCccceeecCCCCCe---EEEecCCchHHhhhccCCCCCceEEEEccCCCCCcchhh----hHHH--hhcc
Q 003025 60 QDRVIIVANQLPVKAKRRPDNKGW---SFSWDEDSLLLQLKDGLPEDMEVIYVGSLKVDVDLSEQD----DVSQ--LLLD 130 (856)
Q Consensus 60 ~~~~iivsnrlP~~~~~~~~~~~~---~~~~~~~~l~~~l~~~~~~~~~~~wvg~~~~~~~~~~~~----~~~~--~~~~ 130 (856)
..++||||||||+.+++++++|+| .++.++|||+++|.+.+ +++||||.+.+.+.+..+ .+.. ....
T Consensus 2 ~~~livvsnR~P~~~~~~~~~g~~~~~~~~~s~GGLv~al~~~~----~~~Wvgw~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (496)
T 3t5t_A 2 GSEIFLASKRAAITYDTDPATGEPRAWLAPGGTGNVVAEQAGVL----NISWIASADSEDDRRASALNPDGVTMELHSGR 77 (496)
T ss_dssp --CEEEEESCCCEEEEECTTTCSEEEEECSSHHHHHHHHHHHHH----TCCEEEECCSHHHHHHHHHCTTCEEEECTTSC
T ss_pred CCCEEEEECCCCeeEEEecCCCceeeeeeccCCCchHHHHhhhc----CCEEEecCCCccchhhhhccccccccccccCC
Confidence 468999999999999987445776 67778899999997754 789999998653221110 1111 1256
Q ss_pred CeeEEEeeCChhhhhhHhhccccccccccccccCCC--CCCCCCCcChHhHHHHHHHHHHHHHHHHHHcCC-CCCEEEEe
Q 003025 131 RFKCVPAFLPPDILTKFYHGFCKQHLWPLFHYMLPF--SATHGGRFDRSLWEAYVSANKIFSQRVIEVINP-EDDYVWIH 207 (856)
Q Consensus 131 ~~~~~pv~l~~~~~~~~y~gf~~~~lWpl~H~~~~~--~~~~~~~~~~~~w~~Y~~vN~~fa~~i~~~~~~-~~D~Vwih 207 (856)
+|+|+||+|+++++++||+||||++|||+|||+++. .|+. .+|+++.|++|++||++||++|++.+++ ++|+||||
T Consensus 78 ~~~~~~v~l~~~~~~~~Y~gf~n~~LWPl~H~~~~~~~~p~~-~~~~~~~w~~Y~~vN~~fA~~i~~~~~~~~~D~VwVh 156 (496)
T 3t5t_A 78 EILVRLIRHDPAVFRNVQNFMTANLMWAANNYGWDRWTQPSF-GSDAREGWADFGRFTRDFADAILKSSAQSADPVYLVH 156 (496)
T ss_dssp EEEEEEECCCHHHHHHHHHHHSTTTHHHHHTTCCCSSSCCCB-CHHHHHHHHHHHHHHHHHHHHHHHHTTTCSSCEEEEE
T ss_pred CeEEEEEeCCHHHHHHHHHHhHhhhcchhhccccccCCCCcc-chhhHHHHHHHHHHHHHHHHHHHHHhccCCCCEEEEe
Confidence 899999999999999999999999999999998543 3332 3566789999999999999999999952 36999999
Q ss_pred CcccchHHHHHHhhcCCCeEEEEEccCCCChHHHhcCC--chHHHHHHhHhCCEEcccCHHHHHHHHHHHHhhh-Cceec
Q 003025 208 DYHLMVLPTFLRRRFTRLRMGFFLHSPFPSSEIYRTLP--VREEILKALLNADLIGFHTFDYARHFLSCCSRML-GLEYQ 284 (856)
Q Consensus 208 Dyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~~~~lp--~r~eil~~ll~~dligf~t~~~~~~Fl~~~~r~l-g~~~~ 284 (856)
|||||+||.|||+++|+++||||||||||++|+|++|| ||++||+|||+||+|||||++|++||++||+|++ |+++.
T Consensus 157 DYhL~llp~~lR~~~~~~~igfFlHiPfPs~e~f~~Lp~~~r~ell~gll~~DligF~t~~y~~~Fl~~~~r~l~g~~~~ 236 (496)
T 3t5t_A 157 DYQLVGVPALLREQRPDAPILLFVHIPWPSADYWRILPKEIRTGILHGMLPATTIGFFADRWCRNFLESVADLLPDARID 236 (496)
T ss_dssp SGGGTTHHHHHHHHCTTSCEEEECCSCCCCHHHHTTSCHHHHHHHHHHHTTSSEEEESSHHHHHHHHHHHHHHCTTCEEE
T ss_pred CccHhHHHHHHHhhCCCCeEEEEEcCCCCCHHHHhhCcHhHHHHHHHHHHhCCEEEEecHHHHHHHHHHHHHHhcCCccc
Confidence 99999999999999999999999999999999999999 7999999999999999999999999999999999 98876
Q ss_pred ccCceeeEEECCEEEEEEEeecccCchHHHHHhcCchHHHHHHHHHHHcCCCeEEEeccCccccCCHHHHHHHHHHHHHh
Q 003025 285 SKRGYIGLEYYGRTVGIKIMPVGIHMGQIESVLRLADKDWRVQELKQQFEGKTVLLGVDDMDIFKGVDLKLLAMEHLLKQ 364 (856)
Q Consensus 285 ~~~~~~~~~~~gr~~~i~i~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~k~iil~VdRld~~KGi~~~l~A~~~ll~~ 364 (856)
...+ .+.++|+.++|.++|+|||++.|.+... ++ .++++++++++++||+|||+|+.|||..+|+|| +|+++
T Consensus 237 ~~~~--~v~~~gr~v~v~viP~GID~~~f~~~~~--~~---~~~lr~~~~~~~lIl~VgRLd~~KGi~~lL~Af-~ll~~ 308 (496)
T 3t5t_A 237 REAM--TVEWRGHRTRLRTMPLGYSPLTLDGRNP--QL---PEGIEEWADGHRLVVHSGRTDPIKNAERAVRAF-VLAAR 308 (496)
T ss_dssp TTTT--EEEETTEEEEEEECCCCBCGGGC----C--CC---CTTHHHHHTTSEEEEEEEESSGGGCHHHHHHHH-HHHHH
T ss_pred ccCC--eEEECCEEEEEEEeccEeCHHHhchhhH--HH---HHHHHHHhCCceEEEEcccCccccCHHHHHHHH-HHHHh
Confidence 6554 5899999999999999999999986543 11 156788888999999999999999999999999 99999
Q ss_pred CCCCcCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCcccEEEEcCCCCHHHHHHHHHhcceeeecccccc
Q 003025 365 HPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDKPVTLSERAAYYTIAECVVVTAVRDG 444 (856)
Q Consensus 365 ~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~~~~lv~~IN~~~~~~~~~pvv~~~~~v~~~el~aly~~ADv~vvtS~~EG 444 (856)
||+++ +++|||||.|+|+++++|+++++++++++++||.+||+. ||+++ +.++.+|+.++|++|||||+||++||
T Consensus 309 ~P~~~-~v~Lv~Vg~psr~~~~~y~~l~~~l~~lv~~in~~~g~~---~V~f~-g~v~~~el~aly~~ADv~vv~SlrEG 383 (496)
T 3t5t_A 309 GGGLE-KTRMLVRMNPNRLYVPANADYVHRVETAVAEANAELGSD---TVRID-NDNDVNHTIACFRRADLLIFNSTVDG 383 (496)
T ss_dssp TSSCT-TEEEEEEEECCCTTSHHHHHHHHHHHHHHHHHHHHHCTT---SEEEE-ECCCHHHHHHHHHHCSEEEECCSSBS
T ss_pred Ccccc-eEEEEEEECCCCCCchHHHHHHHHHHHHHHHhccccCCc---CEEEe-CCCCHHHHHHHHHhccEEEECccccc
Confidence 99999 999999999999999999999999999999999999975 77765 57899999999999999999999999
Q ss_pred CCCcccceeeeecCCCCCCCCCCCCCCCCceEEecCCccccccc-CCceeeCCCCHHHHHHHHHHHHcCCHHHHHHHHHH
Q 003025 445 MNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIGCSPSL-SGAIRVNPWNIEATAEAMHEAIQMNEAEKQLRHEK 523 (856)
Q Consensus 445 ~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l-~~al~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~ 523 (856)
||||++|||||+. ++||+|+|+++|++++| .+|++|||||++++|+||.++|+|+++||+.|+++
T Consensus 384 fgLv~~EamA~~~--------------~~g~lVlSe~aGa~~~l~~~allVnP~D~~~lA~AI~~aL~m~~~er~~r~~~ 449 (496)
T 3t5t_A 384 QNLSTFEAPLVNE--------------RDADVILSETCGAAEVLGEYCRSVNPFDLVEQAEAISAALAAGPRQRAEAAAR 449 (496)
T ss_dssp CCSHHHHHHHHCS--------------SCCEEEEETTBTTHHHHGGGSEEECTTBHHHHHHHHHHHHHCCHHHHHHHHHH
T ss_pred CChhHHHHHHhCC--------------CCCCEEEeCCCCCHHHhCCCEEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHH
Confidence 9999999999953 36899999999999999 47999999999999999999999999999999999
Q ss_pred HhhhhhcCCHHHHHHHHHHHHHHHHHhh
Q 003025 524 HYRYVSTHDVAYWARSFFQDMERTCKDH 551 (856)
Q Consensus 524 ~~~~v~~~~~~~W~~~~l~~l~~~~~~~ 551 (856)
++++|.+||+.+|+++|+++|..+...+
T Consensus 450 ~~~~V~~~d~~~W~~~fl~~L~~~~~~~ 477 (496)
T 3t5t_A 450 RRDAARPWTLEAWVQAQLDGLAADHAAR 477 (496)
T ss_dssp HHHHHTTCBHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHCCHHHHHHHHHHHHhhcccch
Confidence 9999999999999999999999876543
|
| >1uqt_A Alpha, alpha-trehalose-phosphate synthase; glycosyltransferase, transferase; HET: U2F; 2.0A {Escherichia coli} SCOP: c.87.1.6 PDB: 1uqu_A* 2wtx_A* 1gz5_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-92 Score=817.93 Aligned_cols=453 Identities=27% Similarity=0.535 Sum_probs=414.5
Q ss_pred CeEEEEEcCCccceeecCCCCCeEEEecCCchHHhhhccCCCCCceEEEEccCCCCCcchhhhHHHhhccCeeEEEeeCC
Q 003025 61 DRVIIVANQLPVKAKRRPDNKGWSFSWDEDSLLLQLKDGLPEDMEVIYVGSLKVDVDLSEQDDVSQLLLDRFKCVPAFLP 140 (856)
Q Consensus 61 ~~~iivsnrlP~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~wvg~~~~~~~~~~~~~~~~~~~~~~~~~pv~l~ 140 (856)
+|+||||||||+... + +.+.|||+.+|.+.+. ..+++||||+|.. ++ +++.+...+.++|+|+||||+
T Consensus 2 ~~livvsnr~p~~~~-------~--~~~~ggl~~~l~~~~~-~~~~~wvgw~g~~-~~-~~~~~~~~~~~~~~~~~v~l~ 69 (482)
T 1uqt_A 2 SRLVVVSNRIAPPDE-------H--AASAGGLAVGILGALK-AAGGLWFGWSGET-GN-EDQPLKKVKKGNITWASFNLS 69 (482)
T ss_dssp CCEEEEEEECCCCC-------------CCCHHHHHHHHHHH-HHCEEEEEEEEEE-SC-CSSCCEEEEETTEEEEEEEEC
T ss_pred CCEEEEECCCCCCCC-------C--CcCCCcHHHHHHHHHh-hCCCEEEeCCCCC-Cc-ccchhhhhccCCceEEEEECC
Confidence 589999999999721 1 3567999999987664 5799999999875 32 333344445678999999999
Q ss_pred hhhhhhHhhccccccccccccccCCCCCCCCCCcChHhHHHHHHHHHHHHHHHHHHcCCCCCEEEEeCcccchHHHHHHh
Q 003025 141 PDILTKFYHGFCKQHLWPLFHYMLPFSATHGGRFDRSLWEAYVSANKIFSQRVIEVINPEDDYVWIHDYHLMVLPTFLRR 220 (856)
Q Consensus 141 ~~~~~~~y~gf~~~~lWpl~H~~~~~~~~~~~~~~~~~w~~Y~~vN~~fa~~i~~~~~~~~D~VwihDyhl~llp~~lr~ 220 (856)
++++++||+||||++|||+|||+++. ..|+++.|++|+++|+.||+++.+.+++ +|+|||||||++++|.++|+
T Consensus 70 ~~~~~~~y~gf~~~~lWp~~H~~~~~-----~~~~~~~w~~y~~vN~~fa~~l~~~~~~-~DiV~vHdyhl~~l~~~lr~ 143 (482)
T 1uqt_A 70 EQDLDEYYNQFSNAVLWPAFHYRLDL-----VQFQRPAWDGYLRVNALLADKLLPLLQD-DDIIWIHDYHLLPFAHELRK 143 (482)
T ss_dssp HHHHHHHTTTHHHHTHHHHHTTCGGG-----CCCCHHHHHHHHHHHHHHHHHHGGGCCT-TCEEEEESGGGTTHHHHHHH
T ss_pred HHHHHHHHHHhhhhhccccccCcCCc-----cccCHHHHHHHHHHHHHHHHHHHHhcCC-CCEEEEECchHHHHHHHHHH
Confidence 99999999999999999999999865 4899999999999999999999999987 49999999999999999999
Q ss_pred hcCCCeEEEEEccCCCChHHHhcCCchHHHHHHhHhCCEEcccCHHHHHHHHHHHHhhhCceecccCceeeEEECCEEEE
Q 003025 221 RFTRLRMGFFLHSPFPSSEIYRTLPVREEILKALLNADLIGFHTFDYARHFLSCCSRMLGLEYQSKRGYIGLEYYGRTVG 300 (856)
Q Consensus 221 ~~~~~~i~~flH~PfP~~e~~~~lp~r~eil~~ll~~dligf~t~~~~~~Fl~~~~r~lg~~~~~~~~~~~~~~~gr~~~ 300 (856)
+.++++|+||+|+|||++++|+++|++++|+++|+++|+||||+++|+++|+++|+++++.+.... + .+.++|+.++
T Consensus 144 ~~~~~~i~~~~H~pfp~~~~~~~lp~~~~il~~ll~~d~i~f~~~~~~~~f~~~~~~~l~~~~~~~-~--~~~~~g~~~~ 220 (482)
T 1uqt_A 144 RGVNNRIGFFLHIPFPTPEIFNALPTYDTLLEQLCDYDLLGFQTENDRLAFLDCLSNLTRVTTRSA-K--SHTAWGKAFR 220 (482)
T ss_dssp TTCCSCEEEECCSCCCCHHHHTTSTTHHHHHHHHTTSSEEEESSHHHHHHHHHHHHHHSCEEEETT-T--EEEETTEEEE
T ss_pred hCCCCcEEEEEcCCCCCHHHHhhCccHHHHHHhhhccCeEEEECHHHHHHHHHHHHHHhCCccccC-C--eEEECCeEEE
Confidence 999999999999999999999999999999999999999999999999999999999999876553 3 3788999999
Q ss_pred EEEeecccCchHHHHHhcCchHHHHHHHHHHHcCCCeEEEeccCccccCCHHHHHHHHHHHHHhCCCCcCceEEEEEecC
Q 003025 301 IKIMPVGIHMGQIESVLRLADKDWRVQELKQQFEGKTVLLGVDDMDIFKGVDLKLLAMEHLLKQHPKWQGRAVLVQIANP 380 (856)
Q Consensus 301 i~i~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~k~iil~VdRld~~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p 380 (856)
|.++|+|||++.|.+....++..+ ..++++++.++++|++|||+++.||+..+|+||++|++++|+++++++|||||.|
T Consensus 221 v~vip~GID~~~f~~~~~~~~~~~-~~~lr~~~~~~~vil~VgRl~~~Kgi~~ll~A~~~ll~~~p~~~~~v~Lv~vG~p 299 (482)
T 1uqt_A 221 TEVYPIGIEPKEIAKQAAGPLPPK-LAQLKAELKNVQNIFSVERLDYSKGLPERFLAYEALLEKYPQHHGKIRYTQIAPT 299 (482)
T ss_dssp EEECCCCCCHHHHHHHHHSCCCHH-HHHHHHHTTTCEEEEEECCBCGGGCHHHHHHHHHHHHHHCGGGTTTEEEEEECCB
T ss_pred EEEEeccCCHHHHHHHhcCcchHH-HHHHHHHhCCCEEEEEEeCCcccCCHHHHHHHHHHHHHhCccccCcEEEEEEECC
Confidence 999999999999987655555555 6778899989999999999999999999999999999999999999999999999
Q ss_pred CCCCchhHHHHHHHHHHHHHHHhcccCCCCcccEEEEcCCCCHHHHHHHHHhcceeeeccccccCCCcccceeeeecCCC
Q 003025 381 ARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDKPVTLSERAAYYTIAECVVVTAVRDGMNLTPYEYIVCRQGVS 460 (856)
Q Consensus 381 ~r~~~~~~~~l~~~~~~lv~~IN~~~~~~~~~pvv~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~a~~~~~~ 460 (856)
+|+++++|+++++++++++++||.+||+.+|.||+++.+.++.+++.++|++|||||+||++||||||++|||||+.+
T Consensus 300 ~~~~~~~~~~l~~~l~~l~~~in~~~g~~~~~~v~~~~g~v~~~el~~ly~~ADv~v~pS~~EGfgLv~lEAmA~g~~-- 377 (482)
T 1uqt_A 300 SRGDVQAYQDIRHQLENEAGRINGKYGQLGWTPLYYLNQHFDRKLLMKIFRYSDVGLVTPLRDGMNLVAKEYVAAQDP-- 377 (482)
T ss_dssp CSTTSHHHHHHHHHHHHHHHHHHHHHCBTTBCSEEEECSCCCHHHHHHHHHHCSEEEECCSSBSCCHHHHHHHHHSCT--
T ss_pred CccchHHHHHHHHHHHHHHHHHhhhcccCCCceEEEeCCCCCHHHHHHHHHHccEEEECCCcccCCchHHHHHHhCCC--
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999999752
Q ss_pred CCCCCCCCCCCCCceEEecCCcccccccCCceeeCCCCHHHHHHHHHHHHcCCHHHHHHHHHHHhhhhhcCCHHHHHHHH
Q 003025 461 GSESSSESSAPKKSMLVVSEFIGCSPSLSGAIRVNPWNIEATAEAMHEAIQMNEAEKQLRHEKHYRYVSTHDVAYWARSF 540 (856)
Q Consensus 461 ~~~~~~~~~~~~~g~lV~Se~~G~~~~l~~al~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~~ 540 (856)
+++||||+|+++|+++++.+|++|||+|++++|+||.++|+|++++|+.+++++++++.++|+.+|+++|
T Consensus 378 ----------~~~gpvV~S~~~G~~~~l~~g~lv~p~d~~~lA~ai~~lL~~~~~~r~~~~~~~~~~v~~~s~~~~a~~~ 447 (482)
T 1uqt_A 378 ----------ANPGVLVLSQFAGAANELTSALIVNPYDRDEVAAALDRALTMSLAERISRHAEMLDVIVKNDINHWQECF 447 (482)
T ss_dssp ----------TSCCEEEEETTBGGGGTCTTSEEECTTCHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHTCHHHHHHHH
T ss_pred ----------CCCCCEEEECCCCCHHHhCCeEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCCHHHHHHHH
Confidence 2358999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHH
Q 003025 541 FQDMERT 547 (856)
Q Consensus 541 l~~l~~~ 547 (856)
+++++++
T Consensus 448 l~~l~~~ 454 (482)
T 1uqt_A 448 ISDLKQI 454 (482)
T ss_dssp HHHHHHS
T ss_pred HHHHHhc
Confidence 9999876
|
| >1u02_A Trehalose-6-phosphate phosphatase related protein; structural genomics, PSI; 1.92A {Thermoplasma acidophilum} SCOP: c.108.1.15 | Back alignment and structure |
|---|
Probab=99.96 E-value=1.4e-27 Score=251.19 Aligned_cols=221 Identities=20% Similarity=0.339 Sum_probs=164.8
Q ss_pred cEEEEEecCCCCCCCCC--CCCCCCHHHHHHHHHHHhhCCCeEEEecCCChhhHHHhhcCCCCccEEeeCCEEEEeCCCc
Q 003025 591 SRAILFDYDGTVMPQTS--INKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSPCKKLGIAAEHGYFMRWSADE 668 (856)
Q Consensus 591 ~rlI~~DlDGTLl~~~~--~~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~~~~lgliaenG~~I~~~~~~ 668 (856)
+|+|++|+||||++... ..+.++++++++|++| ++.| .|+|+|||++..+.+++..+ +++|++||++|+..+..
T Consensus 1 ikli~~DlDGTLl~~~~~~~~~~i~~~~~~al~~l-~~~g-~v~iaTGR~~~~~~~~~~~l--~~~I~~nGa~i~~~~~~ 76 (239)
T 1u02_A 1 MSLIFLDYDGTLVPIIMNPEESYADAGLLSLISDL-KERF-DTYIVTGRSPEEISRFLPLD--INMICYHGACSKINGQI 76 (239)
T ss_dssp -CEEEEECBTTTBCCCSCGGGCCCCHHHHHHHHHH-HHHS-EEEEECSSCHHHHHHHSCSS--CEEEEGGGTEEEETTEE
T ss_pred CeEEEEecCCCCcCCCCCcccCCCCHHHHHHHHHH-hcCC-CEEEEeCCCHHHHHHHhccc--hheEEECCEEEeeCCee
Confidence 58999999999998321 2457999999999997 6678 99999999999999999776 68999999999884332
Q ss_pred ceEe--cCCCCcccHH-HHHHHHHHHHhhcCCcceEEecccceEEeeecCCCCCCchhHHHHHHHHHHHhcCCCeEEEEc
Q 003025 669 EWQN--CGQSVDFGWI-QIAEPVMKLYTESTDGSYIEIKESALVWHHRDADPGFGSSQAKELLDHLESVLANEPAAVKSG 745 (856)
Q Consensus 669 ~w~~--~~~~~~~~w~-~~v~~i~~~~~~~~~Gs~ie~k~~~l~~~~~~~dp~~~~~~a~el~~~L~~~l~~~~~~v~~g 745 (856)
.|.. .. ...+. +.+..+++.. ...++.+++.+...+.++|+..++ +.....+++.+.+.+. . .+.+.++
T Consensus 77 ~~~~~~~~---~~~l~~~~~~~i~~~~-~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~-~--~~~~~~~ 148 (239)
T 1u02_A 77 VYNNGSDR---FLGVFDRIYEDTRSWV-SDFPGLRIYRKNLAVLYHLGLMGA-DMKPKLRSRIEEIARI-F--GVETYYG 148 (239)
T ss_dssp EECTTGGG---GHHHHHHHHHHHTTHH-HHSTTCEEEEETTEEEEECTTSCS-TTHHHHHHHHHHHHHH-H--TCEEEEC
T ss_pred eecccccc---cchhhHHHHHHHHHHH-hhCCCcEEEecCCEEEEEcCCCCh-hHHHHHHHHHHHHhcc-C--CcEEEeC
Confidence 2210 00 01111 2333444433 334677777777777777765432 2112233444444442 2 2446788
Q ss_pred CeEEEEEeCCCCHHHHHHHHHHHhhhcCCCcceEEEEeCCchhHHHHHHc--cccccCCCCCCCccEEEEEeCCCccccc
Q 003025 746 QFIVEVKPQGVSKGVVAEKIFTTMAESGRHADFVLCIGDDRSDEDMFEII--GNATSSGVLSSNASVFACTVGQKPSKAK 823 (856)
Q Consensus 746 ~~~vEI~p~gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~a--g~~~~~~~~~~~~~~~av~vG~~~s~A~ 823 (856)
..++||.|+++|||.|+++|++++ | ++||||+.||++||+.+ | ++|+|||+++.|+
T Consensus 149 ~~~lei~~~~~~Kg~al~~l~~~~---g-----via~GD~~ND~~Ml~~a~~g--------------~~vam~Na~~~A~ 206 (239)
T 1u02_A 149 KMIIELRVPGVNKGSAIRSVRGER---P-----AIIAGDDATDEAAFEANDDA--------------LTIKVGEGETHAK 206 (239)
T ss_dssp SSEEEEECTTCCHHHHHHHHHTTS---C-----EEEEESSHHHHHHHHTTTTS--------------EEEEESSSCCCCS
T ss_pred CcEEEEEcCCCCHHHHHHHHHhhC---C-----eEEEeCCCccHHHHHHhhCC--------------cEEEECCCCCcce
Confidence 999999999999999999999988 6 99999999999999999 7 5799999999999
Q ss_pred eEcCC---hhHHHHHHHHHHHhcCC
Q 003025 824 YYLDD---AAEVVTMLEALAEASAP 845 (856)
Q Consensus 824 y~l~~---~~eV~~~L~~L~~~~~~ 845 (856)
|++.+ .++|+++|+++......
T Consensus 207 ~v~~~~~~~~gV~~~l~~~~~~~~~ 231 (239)
T 1u02_A 207 FHVADYIEMRKILKFIEMLGVQKKQ 231 (239)
T ss_dssp EEESSHHHHHHHHHHHHHHHHHHC-
T ss_pred EEeCCCCCHHHHHHHHHHHHHhccc
Confidence 99988 89999999998765443
|
| >3dao_A Putative phosphatse; structural genomics, joint center for S genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE 1PE CIT; 1.80A {Eubacterium rectale} | Back alignment and structure |
|---|
Probab=99.94 E-value=3.2e-26 Score=246.71 Aligned_cols=229 Identities=21% Similarity=0.232 Sum_probs=161.9
Q ss_pred HHHHcCCcEEEEEecCCCCCCCCCCCC-CCCHHHHHHHHHHHhhCCCeEEEecCCChhhHHHhhcCCC-CccEEeeCCEE
Q 003025 584 SAYLRSKSRAILFDYDGTVMPQTSINK-APSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSPCK-KLGIAAEHGYF 661 (856)
Q Consensus 584 ~~y~~s~~rlI~~DlDGTLl~~~~~~~-~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~~~-~lgliaenG~~ 661 (856)
++|...++|+|+||+||||++ +++ .++++++++|++| +++|+.|+++|||+...+..++..+. ..++++.||+.
T Consensus 14 ~~~~~~~~kli~~DlDGTLl~---~~~~~i~~~~~~al~~l-~~~G~~v~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~ 89 (283)
T 3dao_A 14 NLYFQGMIKLIATDIDGTLVK---DGSLLIDPEYMSVIDRL-IDKGIIFVVCSGRQFSSEFKLFAPIKHKLLYITDGGTV 89 (283)
T ss_dssp -----CCCCEEEECCBTTTBS---TTCSCCCHHHHHHHHHH-HHTTCEEEEECSSCHHHHHHHTGGGGGGCEEEETTTTE
T ss_pred hhhhccCceEEEEeCcCCCCC---CCCCcCCHHHHHHHHHH-HHCCCEEEEEcCCCHHHHHHHHHHcCCCcEEEECCCcE
Confidence 478899999999999999998 777 8999999999997 78899999999999999999987653 45789999999
Q ss_pred EEeCCCcceEecCCCCcccHHHHHHHHHHHHhhc----------CCcceEEecccce--------EEeeec------CC-
Q 003025 662 MRWSADEEWQNCGQSVDFGWIQIAEPVMKLYTES----------TDGSYIEIKESAL--------VWHHRD------AD- 716 (856)
Q Consensus 662 I~~~~~~~w~~~~~~~~~~w~~~v~~i~~~~~~~----------~~Gs~ie~k~~~l--------~~~~~~------~d- 716 (856)
+...+...+....+ . +.+.++++.+.+. ..+.+.......+ ...+.. ..
T Consensus 90 i~~~~~~i~~~~l~---~---~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~ 163 (283)
T 3dao_A 90 VRTPKEILKTYPMD---E---DIWKGMCRMVRDELPACDYFAATPDFCFAEDGGSPIFHLLRDSYGFEMREVDDITRLDR 163 (283)
T ss_dssp EECSSCEEEECCCC---H---HHHHHHHHHHHHHCTTCEEEEECSSCEEESCTTSHHHHHHHHTSCCCEEECSCGGGCCC
T ss_pred EEECCEEEEEecCC---H---HHHHHHHHHHHHhcCCceEEEEeCCeEEEeCCCHHHHHHHHHhhcCCceEcCCHHHcCc
Confidence 99865544443322 1 2333344333322 1122211100000 000000 00
Q ss_pred CC------C-CchhHHHHHHHHHHHhcCCCeEEEEcCeEEEEEeCCCCHHHHHHHHHHHhhhcCCCcceEEEEeCCchhH
Q 003025 717 PG------F-GSSQAKELLDHLESVLANEPAAVKSGQFIVEVKPQGVSKGVVAEKIFTTMAESGRHADFVLCIGDDRSDE 789 (856)
Q Consensus 717 p~------~-~~~~a~el~~~L~~~l~~~~~~v~~g~~~vEI~p~gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~ 789 (856)
.. + ......++.+.+.+.+.+....+.++..++||+|+++|||.|++++++++ |++++++++|||+.||+
T Consensus 164 ~~~~ki~i~~~~~~~~~~~~~l~~~~~~~~~~~~s~~~~~ei~~~~~~K~~~l~~l~~~l---gi~~~e~ia~GD~~NDi 240 (283)
T 3dao_A 164 NDIIKFTVFHPDKCEELCTPVFIPAWNKKAHLAAAGKEWVDCNAKGVSKWTALSYLIDRF---DLLPDEVCCFGDNLNDI 240 (283)
T ss_dssp SCCCEEEEECSSCHHHHHTTTHHHHHTTTEEEEEETTTEEEEEETTCCHHHHHHHHHHHT---TCCGGGEEEEECSGGGH
T ss_pred cCceEEEEEcChHHHHHHHHHHHHHhcCCEEEEEecCceEEEeeCCCcHHHHHHHHHHHh---CCCHHHEEEECCCHHHH
Confidence 00 0 01123444555555565545677889999999999999999999999999 99999999999999999
Q ss_pred HHHHHccccccCCCCCCCccEEEEEeCCC----ccccceEcCC--hhHHHHHHHHH
Q 003025 790 DMFEIIGNATSSGVLSSNASVFACTVGQK----PSKAKYYLDD--AAEVVTMLEAL 839 (856)
Q Consensus 790 ~Mf~~ag~~~~~~~~~~~~~~~av~vG~~----~s~A~y~l~~--~~eV~~~L~~L 839 (856)
+||+.+|. +|+||++ +..|+|++.+ .++|+++|+++
T Consensus 241 ~ml~~ag~--------------~vam~na~~~~k~~A~~v~~s~~edGv~~~l~~~ 282 (283)
T 3dao_A 241 EMLQNAGI--------------SYAVSNARQEVIAAAKHTCAPYWENGVLSVLKSF 282 (283)
T ss_dssp HHHHHSSE--------------EEEETTSCHHHHHHSSEEECCGGGTHHHHHHHHT
T ss_pred HHHHhCCC--------------EEEcCCCCHHHHHhcCeECCCCCCChHHHHHHHh
Confidence 99999984 6888886 5789999864 57799999876
|
| >3pgv_A Haloacid dehalogenase-like hydrolase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: EPE; 2.39A {Klebsiella pneumoniae subsp} | Back alignment and structure |
|---|
Probab=99.94 E-value=1e-25 Score=242.95 Aligned_cols=229 Identities=16% Similarity=0.188 Sum_probs=156.7
Q ss_pred HHHHcCCcEEEEEecCCCCCCCCCCCCCCCHHHHHHHHHHHhhCCCeEEEecCCChhhHHHhhcCCC-CccEEeeCCEEE
Q 003025 584 SAYLRSKSRAILFDYDGTVMPQTSINKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSPCK-KLGIAAEHGYFM 662 (856)
Q Consensus 584 ~~y~~s~~rlI~~DlDGTLl~~~~~~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~~~-~lgliaenG~~I 662 (856)
.+|+..++|+|+||+||||++ +.+.++++++++|++| +++|+.|+|+|||+...+..++..+. ...+++.||+.+
T Consensus 14 ~~~~~~~~kli~~DlDGTLl~---~~~~i~~~~~~al~~l-~~~G~~v~iaTGR~~~~~~~~~~~l~~~~~~I~~nGa~i 89 (285)
T 3pgv_A 14 NLYFQGMYQVVASDLDGTLLS---PDHFLTPYAKETLKLL-TARGINFVFATGRHYIDVGQIRDNLGIRSYMITSNGARV 89 (285)
T ss_dssp -------CCEEEEECCCCCSC---TTSCCCHHHHHHHHHH-HTTTCEEEEECSSCGGGGHHHHHHHCSCCEEEEGGGTEE
T ss_pred cccccCcceEEEEeCcCCCCC---CCCcCCHHHHHHHHHH-HHCCCEEEEEcCCCHHHHHHHHHhcCCCccEEEcCCeEE
Confidence 589999999999999999999 8899999999999997 78899999999999999998886543 356899999999
Q ss_pred EeCCCc-ceEecCCCCcccHHHHHHHHHHHHhhcCCcceE--Eecccc--------eE-------EeeecCCC------C
Q 003025 663 RWSADE-EWQNCGQSVDFGWIQIAEPVMKLYTESTDGSYI--EIKESA--------LV-------WHHRDADP------G 718 (856)
Q Consensus 663 ~~~~~~-~w~~~~~~~~~~w~~~v~~i~~~~~~~~~Gs~i--e~k~~~--------l~-------~~~~~~dp------~ 718 (856)
....+. .+.... + .+.+.++++.+... .+..+ ...... +. +.+...+. .
T Consensus 90 ~~~~~~~l~~~~l---~---~~~~~~i~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (285)
T 3pgv_A 90 HDSDGQQIFAHNL---D---RDIAADLFEIVRND-PKIVTNVYREDEWYMNRHRPEEMRFFKEAVFNYKLYEPGELDPQG 162 (285)
T ss_dssp ECTTSCEEEECCC---C---HHHHHHHTTTTTTC-TTCEEEEEETTEEEESSCC-----CTTSCCCCEEECCTTCSCCSS
T ss_pred ECCCCCEEEecCC---C---HHHHHHHHHHHhhc-CCeEEEEEcCCcEEEcCCCHHHHHHHHhcCCccEEecHHHcCCCC
Confidence 854433 233221 1 23344444422111 11110 000000 00 00000000 0
Q ss_pred --------CCchhHHHHHHHHHHHhcCCCeEEEEcCeEEEEEeCCCCHHHHHHHHHHHhhhcCCCcceEEEEeCCchhHH
Q 003025 719 --------FGSSQAKELLDHLESVLANEPAAVKSGQFIVEVKPQGVSKGVVAEKIFTTMAESGRHADFVLCIGDDRSDED 790 (856)
Q Consensus 719 --------~~~~~a~el~~~L~~~l~~~~~~v~~g~~~vEI~p~gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~ 790 (856)
.......++.+.+.+.+......+.++..++||.|+++|||.|++++++++ |++++++++|||+.||++
T Consensus 163 i~ki~~~~~~~~~~~~~~~~l~~~~~~~~~~~~s~~~~~ei~~~~~~K~~al~~l~~~l---gi~~~~~ia~GD~~NDi~ 239 (285)
T 3pgv_A 163 ISKVFFTCEDHEHLLPLEQAMNARWGDRVNVSFSTLTCLEVMAGGVSKGHALEAVAKML---GYTLSDCIAFGDGMNDAE 239 (285)
T ss_dssp EEEEEEECSCHHHHHHHHHHHHHHHGGGEEEEESSTTEEEEEETTCSHHHHHHHHHHHT---TCCGGGEEEEECSGGGHH
T ss_pred ceEEEEeCCCHHHHHHHHHHHHHHhcCCEEEEEeCCceEEEecCCCChHHHHHHHHHHh---CCCHHHEEEECCcHhhHH
Confidence 001234455566665555444566778899999999999999999999999 999999999999999999
Q ss_pred HHHHccccccCCCCCCCccEEEEEeCCC----ccccce--Ec--CChhHHHHHHHHHH
Q 003025 791 MFEIIGNATSSGVLSSNASVFACTVGQK----PSKAKY--YL--DDAAEVVTMLEALA 840 (856)
Q Consensus 791 Mf~~ag~~~~~~~~~~~~~~~av~vG~~----~s~A~y--~l--~~~~eV~~~L~~L~ 840 (856)
||+.+|. +|+|||+ +..|+| ++ ++.++|+++|+++.
T Consensus 240 ml~~ag~--------------~vAm~Na~~~vk~~A~~~~v~~sn~edGva~~i~~~~ 283 (285)
T 3pgv_A 240 MLSMAGK--------------GCIMANAHQRLKDLHPELEVIGSNADDAVPRYLRKLY 283 (285)
T ss_dssp HHHHSSE--------------EEECTTSCHHHHHHCTTSEECCCGGGTHHHHHHHHHH
T ss_pred HHHhcCC--------------EEEccCCCHHHHHhCCCCEecccCCcchHHHHHHHHh
Confidence 9999984 7899986 466775 54 46789999999875
|
| >3l7y_A Putative uncharacterized protein SMU.1108C; hydrolase; 2.00A {Streptococcus mutans} | Back alignment and structure |
|---|
Probab=99.93 E-value=7.8e-25 Score=238.32 Aligned_cols=226 Identities=15% Similarity=0.235 Sum_probs=163.1
Q ss_pred CCcEEEEEecCCCCCCCCCCCCCCCHH-HHHHHHHHHhhCCCeEEEecCCChhhHHHhhcCCC-CccEEeeCCEEEEeCC
Q 003025 589 SKSRAILFDYDGTVMPQTSINKAPSQA-VISIINTLCNDARNTVFVVSGRGRDCLGKWFSPCK-KLGIAAEHGYFMRWSA 666 (856)
Q Consensus 589 s~~rlI~~DlDGTLl~~~~~~~~~s~~-~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~~~-~lgliaenG~~I~~~~ 666 (856)
.++|+|+||+||||++ +.+.+++. +.++|++| +++|+.|+++|||+...+.+++..+. ..++++.||+.+...+
T Consensus 35 M~iKli~fDlDGTLld---~~~~i~~~~~~~al~~l-~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~~ 110 (304)
T 3l7y_A 35 MSVKVIATDMDGTFLN---SKGSYDHNRFQRILKQL-QERDIRFVVASSNPYRQLREHFPDCHEQLTFVGENGANIISKN 110 (304)
T ss_dssp -CCSEEEECCCCCCSC---TTSCCCHHHHHHHHHHH-HHTTCEEEEECSSCHHHHHTTCTTTGGGSEEEEGGGTEEEETT
T ss_pred eeeEEEEEeCCCCCCC---CCCccCHHHHHHHHHHH-HHCCCEEEEEeCCCHHHHHHHHHHhCCCCcEEeCCCcEEEECC
Confidence 3689999999999999 88899998 89999997 77899999999999999999987654 3678999999997655
Q ss_pred CcceEecCCCCcccHHHHHHHHHHHHhhcCC----------cceEEeccc------------ceE-E-eeecC-CCC---
Q 003025 667 DEEWQNCGQSVDFGWIQIAEPVMKLYTESTD----------GSYIEIKES------------ALV-W-HHRDA-DPG--- 718 (856)
Q Consensus 667 ~~~w~~~~~~~~~~w~~~v~~i~~~~~~~~~----------Gs~ie~k~~------------~l~-~-~~~~~-dp~--- 718 (856)
...+.... + .+.+.++++.+.+..+ +.+...... .+. . .+... ...
T Consensus 111 ~~i~~~~l---~---~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~k 184 (304)
T 3l7y_A 111 QSLIEVFQ---Q---REDIASIIYFIEEKYPQAVIALSGEKKGYLKKGVSENIVKMLSPFFPVLELVNSFSPLPDERFFK 184 (304)
T ss_dssp EEEEECCC---C---HHHHHHHHHHHHHHCTTSEEEEEESSCEEEETTSCHHHHHHHTTSCSSEEEESCCSSCC-CCEEE
T ss_pred EEEEEecC---C---HHHHHHHHHHHHHhcCCeEEEEEcCCCEeeeCCCCHHHHHHHHHHhccceecCCHHHcCcCCeEE
Confidence 44444322 1 1234444444433211 111111000 000 0 00000 000
Q ss_pred ----CCchhHHHHHHHHHHHhcC-CCeEEEEcCeEEEEEeCCCCHHHHHHHHHHHhhhcCCCcceEEEEeCCchhHHHHH
Q 003025 719 ----FGSSQAKELLDHLESVLAN-EPAAVKSGQFIVEVKPQGVSKGVVAEKIFTTMAESGRHADFVLCIGDDRSDEDMFE 793 (856)
Q Consensus 719 ----~~~~~a~el~~~L~~~l~~-~~~~v~~g~~~vEI~p~gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~ 793 (856)
......+++.+.+.+.+.+ ....+.++..++||+|+++|||.|++++++++ |++++++++|||+.||++||+
T Consensus 185 i~~~~~~~~~~~~~~~l~~~~~~~~~~~~~s~~~~~ei~~~~~~K~~al~~l~~~l---gi~~~e~i~~GDs~NDi~m~~ 261 (304)
T 3l7y_A 185 LTLQVKEEESAQIMKAIADYKTSQRLVGTASGFGYIDIITKGLHKGWALQQLLKRW---NFTSDHLMAFGDGGNDIEMLK 261 (304)
T ss_dssp EEEECCGGGHHHHHHHHHTSTTTTTEEEEECSTTEEEEEETTCSHHHHHHHHHHHT---TCCGGGEEEEECSGGGHHHHH
T ss_pred EEEEcCHHHHHHHHHHHHHhcCCCeEEEEEcCCceEEEEcCCCCHHHHHHHHHHHh---CcCHHHEEEECCCHHHHHHHH
Confidence 0012356677777665655 34566778899999999999999999999999 999999999999999999999
Q ss_pred HccccccCCCCCCCccEEEEEeCCC----ccccceEcCC--hhHHHHHHHHHHH
Q 003025 794 IIGNATSSGVLSSNASVFACTVGQK----PSKAKYYLDD--AAEVVTMLEALAE 841 (856)
Q Consensus 794 ~ag~~~~~~~~~~~~~~~av~vG~~----~s~A~y~l~~--~~eV~~~L~~L~~ 841 (856)
.+|. +|+||++ +..|+|++++ .++|+++|+++..
T Consensus 262 ~ag~--------------~vam~na~~~~k~~Ad~v~~~~~edGv~~~l~~~~~ 301 (304)
T 3l7y_A 262 LAKY--------------SYAMANAPKNVKAAANYQAKSNDESGVLDVIDNYLA 301 (304)
T ss_dssp HCTE--------------EEECTTSCHHHHHHCSEECCCGGGTHHHHHHHHHHH
T ss_pred hcCC--------------eEEcCCcCHHHHHhccEEcCCCCcchHHHHHHHHHH
Confidence 9984 7888886 5789999865 5779999999875
|
| >3fro_A GLGA glycogen synthase; glycosyltransferase family, UDP/ADP-glucose-glycogen synthas rossman folds, transferase; HET: NHF; 2.50A {Pyrococcus abyssi} SCOP: c.87.1.8 PDB: 2bis_A* 3l01_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=6.5e-25 Score=248.90 Aligned_cols=312 Identities=15% Similarity=0.148 Sum_probs=233.9
Q ss_pred HHHHHHHHHHHHHHHHHH----cCCCCCEEEEeCcccchHHHHHHhhcCCCeEEEEEccCCCCh---HHHhcCC------
Q 003025 179 WEAYVSANKIFSQRVIEV----INPEDDYVWIHDYHLMVLPTFLRRRFTRLRMGFFLHSPFPSS---EIYRTLP------ 245 (856)
Q Consensus 179 w~~Y~~vN~~fa~~i~~~----~~~~~D~VwihDyhl~llp~~lr~~~~~~~i~~flH~PfP~~---e~~~~lp------ 245 (856)
+..+....+.....+... .+| |+|++|+++..+++.++++ ..++|+.+.+|.+++.. ..+..-.
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~--Dii~~~~~~~~~~~~~~~~-~~~~~~v~~~h~~~~~~~~~~~~~~~~~~~~~~ 175 (439)
T 3fro_A 99 IRKAVTFGRASVLLLNDLLREEPLP--DVVHFHDWHTVFAGALIKK-YFKIPAVFTIHRLNKSKLPAFYFHEAGLSELAP 175 (439)
T ss_dssp HHHHHHHHHHHHHHHHHHTTTSCCC--SEEEEESGGGHHHHHHHHH-HHCCCEEEEESCCCCCCEEHHHHHHTTCGGGCC
T ss_pred hhhhHHHHHHHHHHHHHHhccCCCC--eEEEecchhhhhhHHHHhh-ccCCCEEEEecccccccCchHHhCccccccccc
Confidence 344444444444444433 244 9999999999888888874 45899999999998642 1221111
Q ss_pred --chHHHHHHhHhCCEEcccCHHHHHHHHHHHHhhhCceecccCceeeEEECCEEEEEEEeecccCchHHHHHhcCchHH
Q 003025 246 --VREEILKALLNADLIGFHTFDYARHFLSCCSRMLGLEYQSKRGYIGLEYYGRTVGIKIMPVGIHMGQIESVLRLADKD 323 (856)
Q Consensus 246 --~r~eil~~ll~~dligf~t~~~~~~Fl~~~~r~lg~~~~~~~~~~~~~~~gr~~~i~i~p~GId~~~~~~~~~~~~~~ 323 (856)
...-....+-.+|.|.+.+..+.+.... .++.. ..++.++|+|||.+.|.+....+...
T Consensus 176 ~~~~~~~~~~~~~ad~ii~~S~~~~~~~~~----~~~~~---------------~~~i~vi~ngvd~~~~~~~~~~~~~~ 236 (439)
T 3fro_A 176 YPDIDPEHTGGYIADIVTTVSRGYLIDEWG----FFRNF---------------EGKITYVFNGIDCSFWNESYLTGSRD 236 (439)
T ss_dssp SSEECHHHHHHHHCSEEEESCHHHHHHTHH----HHGGG---------------TTSEEECCCCCCTTTSCGGGSCSCHH
T ss_pred cceeeHhhhhhhhccEEEecCHHHHHHHhh----hhhhc---------------CCceeecCCCCCchhcCcccccchhh
Confidence 1123344555799999999887776332 11111 12456799999999886553333344
Q ss_pred HHHHHHHHHc--CCCeEEEeccCcc-ccCCHHHHHHHHHHHHHhC--CCCcCceEEEEEecCCCCCchhHHHHHHHHHHH
Q 003025 324 WRVQELKQQF--EGKTVLLGVDDMD-IFKGVDLKLLAMEHLLKQH--PKWQGRAVLVQIANPARGRGKDLEEIQAEIHAT 398 (856)
Q Consensus 324 ~~~~~l~~~~--~~k~iil~VdRld-~~KGi~~~l~A~~~ll~~~--p~~~~~vvLvqi~~p~r~~~~~~~~l~~~~~~l 398 (856)
.....+++++ .++++|+++||+. +.||+..+++|++++.+++ |++ .|+.+|.. + .++.++++++
T Consensus 237 ~~~~~~~~~~~~~~~~~i~~~G~~~~~~Kg~~~li~a~~~l~~~~~~~~~----~l~i~G~g-----~--~~~~~~l~~~ 305 (439)
T 3fro_A 237 ERKKSLLSKFGMDEGVTFMFIGRFDRGQKGVDVLLKAIEILSSKKEFQEM----RFIIIGKG-----D--PELEGWARSL 305 (439)
T ss_dssp HHHHHHHHHHTCCSCEEEEEECCSSCTTBCHHHHHHHHHHHHTSGGGGGE----EEEEECCC-----C--HHHHHHHHHH
T ss_pred hhHHHHHHHcCCCCCcEEEEEcccccccccHHHHHHHHHHHHhcccCCCe----EEEEEcCC-----C--hhHHHHHHHH
Confidence 4556677776 3449999999999 9999999999999998866 654 48888742 2 2344566666
Q ss_pred HHHHhcccCCCCcccEEEEcCCCCHHHHHHHHHhcceeeeccccccCCCcccceeeeecCCCCCCCCCCCCCCCCceEEe
Q 003025 399 CKRINETFGRPGYEPVVFIDKPVTLSERAAYYTIAECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVV 478 (856)
Q Consensus 399 v~~IN~~~~~~~~~pvv~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~g~lV~ 478 (856)
+++.+ .++++.+.++.+++.++|+.||++|+||..||||++++|||+|+. |+|+
T Consensus 306 ~~~~~---------~~~~~~g~~~~~~~~~~~~~adv~v~ps~~e~~~~~~~EAma~G~-----------------Pvi~ 359 (439)
T 3fro_A 306 EEKHG---------NVKVITEMLSREFVRELYGSVDFVIIPSYFEPFGLVALEAMCLGA-----------------IPIA 359 (439)
T ss_dssp HHHCT---------TEEEECSCCCHHHHHHHHTTCSEEEECBSCCSSCHHHHHHHHTTC-----------------EEEE
T ss_pred HhhcC---------CEEEEcCCCCHHHHHHHHHHCCEEEeCCCCCCccHHHHHHHHCCC-----------------CeEE
Confidence 66543 377789999999999999999999999999999999999999954 9999
Q ss_pred cCCccccccc--CCceeeCCCCHHHHHHHHHHHHcCCHHHHHHHHHHHhhhhhcCCHHHHHHHHHHHHHHHHH
Q 003025 479 SEFIGCSPSL--SGAIRVNPWNIEATAEAMHEAIQMNEAEKQLRHEKHYRYVSTHDVAYWARSFFQDMERTCK 549 (856)
Q Consensus 479 Se~~G~~~~l--~~al~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~l~~~~~ 549 (856)
|+.+|..+.+ ..|++++|.|++++|++|.++++++++.++...++.+++++.+++..+++++++-++++.+
T Consensus 360 s~~~~~~e~~~~~~g~~~~~~d~~~la~~i~~ll~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~ 432 (439)
T 3fro_A 360 SAVGGLRDIITNETGILVKAGDPGELANAILKALELSRSDLSKFRENCKKRAMSFSWEKSAERYVKAYTGSID 432 (439)
T ss_dssp ESSTHHHHHCCTTTCEEECTTCHHHHHHHHHHHHHHTTTTTHHHHHHHHHHHHTSCHHHHHHHHHHHHHTCSC
T ss_pred cCCCCcceeEEcCceEEeCCCCHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHH
Confidence 9999999888 3489999999999999999999966677777778888888889999999999988877544
|
| >4dw8_A Haloacid dehalogenase-like hydrolase; HAD, putative phosphatase, enzyme function initiative, EFI, structural genomics; 1.50A {Bacteroides thetaiotaomicron} PDB: 3niw_A 4dwo_A | Back alignment and structure |
|---|
Probab=99.93 E-value=1.3e-24 Score=232.81 Aligned_cols=227 Identities=16% Similarity=0.181 Sum_probs=160.0
Q ss_pred CcEEEEEecCCCCCCCCCCCCCCCHHHHHHHHHHHhhCCCeEEEecCCChhhHHHhhcCCC----CccEEeeCCEEEEeC
Q 003025 590 KSRAILFDYDGTVMPQTSINKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSPCK----KLGIAAEHGYFMRWS 665 (856)
Q Consensus 590 ~~rlI~~DlDGTLl~~~~~~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~~~----~lgliaenG~~I~~~ 665 (856)
++|+|+||+||||++ +.+.++++++++|+++ +++|+.|+++|||+...+.+++..+. ...+++.||+.+...
T Consensus 4 ~~kli~fDlDGTLl~---~~~~i~~~~~~al~~l-~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~~~~i~~nGa~i~~~ 79 (279)
T 4dw8_A 4 KYKLIVLDLDGTLTN---SKKEISSRNRETLIRI-QEQGIRLVLASGRPTYGIVPLANELRMNEFGGFILSYNGGEIINW 79 (279)
T ss_dssp CCCEEEECCCCCCSC---TTSCCCHHHHHHHHHH-HHTTCEEEEECSSCHHHHHHHHHHTTGGGTTCEEEEGGGTEEEET
T ss_pred cceEEEEeCCCCCCC---CCCccCHHHHHHHHHH-HHCCCEEEEEcCCChHHHHHHHHHhCCCCCCCEEEEeCCeEEEEC
Confidence 489999999999999 8899999999999997 77899999999999999999887654 356899999999864
Q ss_pred --CCcceEecCCCCcccHHHHHHHHHHHHhhcCCcceEEecccceE----------------EeeecCC-------CCC-
Q 003025 666 --ADEEWQNCGQSVDFGWIQIAEPVMKLYTESTDGSYIEIKESALV----------------WHHRDAD-------PGF- 719 (856)
Q Consensus 666 --~~~~w~~~~~~~~~~w~~~v~~i~~~~~~~~~Gs~ie~k~~~l~----------------~~~~~~d-------p~~- 719 (856)
+...+....+ .+ .+.++++.+.+..-...+......+. ..+...+ ...
T Consensus 80 ~~~~~~~~~~l~---~~---~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (279)
T 4dw8_A 80 ESKEMMYENVLP---NE---VVPVLYECARTNHLSILTYDGAEIVTENSLDPYVQKEAFLNKMAIRETNDFLTDITLPVA 153 (279)
T ss_dssp TTCCEEEECCCC---GG---GHHHHHHHHHHTTCEEEEEETTEEEESCTTCHHHHHHHHHHTCEEEECSCHHHHSCSCCS
T ss_pred CCCeEEEEecCC---HH---HHHHHHHHHHHcCCEEEEEECCEEEEeCCCCHHHHHHhhhcCCCcccHHHHHHhhcCCce
Confidence 2222332222 22 22333333322210011111000000 0000000 000
Q ss_pred ------CchhHHHHHHHHHHHhcCCCeEEEEcCeEEEEEeCCCCHHHHHHHHHHHhhhcCCCcceEEEEeCCchhHHHHH
Q 003025 720 ------GSSQAKELLDHLESVLANEPAAVKSGQFIVEVKPQGVSKGVVAEKIFTTMAESGRHADFVLCIGDDRSDEDMFE 793 (856)
Q Consensus 720 ------~~~~a~el~~~L~~~l~~~~~~v~~g~~~vEI~p~gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~ 793 (856)
......++.+.+.+.+......+.++..++|+.|+++|||.+++++++++ |++++++++|||+.||++||+
T Consensus 154 ki~~~~~~~~~~~~~~~l~~~~~~~~~~~~s~~~~~ei~~~~~~K~~~l~~l~~~l---gi~~~~~i~~GD~~NDi~m~~ 230 (279)
T 4dw8_A 154 KCLIVGDAGKLIPVESELCIRLQGKINVFRSEPYFLELVPQGIDKALSLSVLLENI---GMTREEVIAIGDGYNDLSMIK 230 (279)
T ss_dssp CEEEESCHHHHHHHHHHHHHHTTTTCEEEEEETTEEEEECTTCCHHHHHHHHHHHH---TCCGGGEEEEECSGGGHHHHH
T ss_pred EEEEeCCHHHHHHHHHHHHHHhcCCEEEEEcCCcEEEEecCCCChHHHHHHHHHHc---CCCHHHEEEECCChhhHHHHH
Confidence 01234556666666565555677788999999999999999999999999 999999999999999999999
Q ss_pred HccccccCCCCCCCccEEEEEeCCC----ccccceEcC--ChhHHHHHHHHHHHhc
Q 003025 794 IIGNATSSGVLSSNASVFACTVGQK----PSKAKYYLD--DAAEVVTMLEALAEAS 843 (856)
Q Consensus 794 ~ag~~~~~~~~~~~~~~~av~vG~~----~s~A~y~l~--~~~eV~~~L~~L~~~~ 843 (856)
.+| ++|+||++ +..|+|++. +.++|+++|+++....
T Consensus 231 ~ag--------------~~vam~na~~~~k~~A~~v~~~~~e~Gv~~~i~~~~~~~ 272 (279)
T 4dw8_A 231 FAG--------------MGVAMGNAQEPVKKAADYITLTNDEDGVAEAIERIFNVE 272 (279)
T ss_dssp HSS--------------EEEECTTSCHHHHHHCSEECCCGGGTHHHHHHHHHC---
T ss_pred HcC--------------cEEEcCCCcHHHHHhCCEEcCCCCCcHHHHHHHHHHhcc
Confidence 998 47889986 467999985 4688999999987543
|
| >3dnp_A Stress response protein YHAX; structural PSI-2, protein structure initiative, midwest center for STR genomics, MCSG, unknown function; HET: MSE; 1.85A {Bacillus subtilis} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.92 E-value=4.6e-24 Score=229.95 Aligned_cols=226 Identities=14% Similarity=0.156 Sum_probs=160.0
Q ss_pred CcEEEEEecCCCCCCCCCCCCCCCHHHHHHHHHHHhhCCCeEEEecCCChhhHHHhhcCCC-CccEEeeCCEEEEeCCCc
Q 003025 590 KSRAILFDYDGTVMPQTSINKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSPCK-KLGIAAEHGYFMRWSADE 668 (856)
Q Consensus 590 ~~rlI~~DlDGTLl~~~~~~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~~~-~lgliaenG~~I~~~~~~ 668 (856)
++|+|+||+||||++ +.+.+++++.++|++| +++|+.|+++|||+...+..++..+. ..++++.||+.+....+.
T Consensus 5 ~~kli~fDlDGTLl~---~~~~i~~~~~~al~~l-~~~G~~~~iaTGR~~~~~~~~~~~~~~~~~~i~~nGa~i~~~~~~ 80 (290)
T 3dnp_A 5 SKQLLALNIDGALLR---SNGKIHQATKDAIEYV-KKKGIYVTLVTNRHFRSAQKIAKSLKLDAKLITHSGAYIAEKIDA 80 (290)
T ss_dssp -CCEEEECCCCCCSC---TTSCCCHHHHHHHHHH-HHTTCEEEEBCSSCHHHHHHHHHHTTCCSCEEEGGGTEEESSTTS
T ss_pred cceEEEEcCCCCCCC---CCCccCHHHHHHHHHH-HHCCCEEEEECCCChHHHHHHHHHcCCCCeEEEcCCeEEEcCCCC
Confidence 479999999999999 8889999999999997 77899999999999999988886654 237899999999863332
Q ss_pred -ceEecCCCCcccHHHHHHHHHHHHhhcCCcceEEecccceE-------------------------Eeeec-------C
Q 003025 669 -EWQNCGQSVDFGWIQIAEPVMKLYTESTDGSYIEIKESALV-------------------------WHHRD-------A 715 (856)
Q Consensus 669 -~w~~~~~~~~~~w~~~v~~i~~~~~~~~~Gs~ie~k~~~l~-------------------------~~~~~-------~ 715 (856)
.+.... + .+.+.++++.+.+......+........ ..+.. .
T Consensus 81 ~~~~~~l---~---~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (290)
T 3dnp_A 81 PFFEKRI---S---DDHTFNIVQVLESYQCNIRLLHEKYSIGNKKKVNSNLLGKALIHPSDPIFYPVQFVESLSDLLMDE 154 (290)
T ss_dssp CSEECCC---C---HHHHHHHHHHHHTSSCEEEEECSSCEEECCCCCCCHHHHHSCCCCCBTTTBCEEECSCHHHHHHHS
T ss_pred EEEecCC---C---HHHHHHHHHHHHHcCceEEEEECCcEEeeccccchhhhhhhhccccccccccccccCCHHHHHhcC
Confidence 233221 1 3445556665544311111111110000 00000 0
Q ss_pred CCC-------CCchhHHHHHHHHHHHhcCCCeEEEEcCeEEEEEeCCCCHHHHHHHHHHHhhhcCCCcceEEEEeCCchh
Q 003025 716 DPG-------FGSSQAKELLDHLESVLANEPAAVKSGQFIVEVKPQGVSKGVVAEKIFTTMAESGRHADFVLCIGDDRSD 788 (856)
Q Consensus 716 dp~-------~~~~~a~el~~~L~~~l~~~~~~v~~g~~~vEI~p~gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND 788 (856)
... .......++.+.+.. +......+.++..++||.|+++|||.|++++++++ |++++++++|||+.||
T Consensus 155 ~~~~~ki~~~~~~~~~~~~~~~l~~-~~~~~~~~~s~~~~~ei~~~~~~K~~~l~~l~~~l---gi~~~~~i~~GD~~ND 230 (290)
T 3dnp_A 155 PVSAPVIEVYTEHDIQHDITETITK-AFPAVDVIRVNDEKLNIVPKGVSKEAGLALVASEL---GLSMDDVVAIGHQYDD 230 (290)
T ss_dssp CCCCSEEEEECCGGGHHHHHHHHHH-HCTTEEEEEEETTEEEEEETTCCHHHHHHHHHHHT---TCCGGGEEEEECSGGG
T ss_pred CCCceEEEEeCCHHHHHHHHHHHHh-hCCcEEEEEeCCCeEEEEECCCCHHHHHHHHHHHc---CCCHHHEEEECCchhh
Confidence 000 011234455555532 22333556778999999999999999999999999 9999999999999999
Q ss_pred HHHHHHccccccCCCCCCCccEEEEEeCCC----ccccceEcCC--hhHHHHHHHHHHHhc
Q 003025 789 EDMFEIIGNATSSGVLSSNASVFACTVGQK----PSKAKYYLDD--AAEVVTMLEALAEAS 843 (856)
Q Consensus 789 ~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~----~s~A~y~l~~--~~eV~~~L~~L~~~~ 843 (856)
++||+.+|. +|+||++ +..|+|++.+ .++|+++|+++....
T Consensus 231 i~m~~~ag~--------------~vam~na~~~~k~~Ad~v~~s~~edGv~~~i~~~~~~~ 277 (290)
T 3dnp_A 231 LPMIELAGL--------------GVAMGNAVPEIKRKADWVTRSNDEQGVAYMMKEYFRMQ 277 (290)
T ss_dssp HHHHHHSSE--------------EEECTTSCHHHHHHSSEECCCTTTTHHHHHHHHHHHHH
T ss_pred HHHHHhcCC--------------EEEecCCcHHHHHhcCEECCCCCccHHHHHHHHHHHhc
Confidence 999999984 6888886 5789999854 577999999987643
|
| >3fzq_A Putative hydrolase; YP_001086940.1, putative haloacid dehalogenase-like hydrolas structural genomics, joint center for structural genomics; HET: MSE; 2.10A {Clostridium difficile} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.92 E-value=1.4e-24 Score=231.53 Aligned_cols=223 Identities=14% Similarity=0.197 Sum_probs=155.0
Q ss_pred CcEEEEEecCCCCCCCCCCCCCCCHHHHHHHHHHHhhCCCeEEEecCCChhhHHHhhcCCCCccEEeeCCEEEEeCCCcc
Q 003025 590 KSRAILFDYDGTVMPQTSINKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSPCKKLGIAAEHGYFMRWSADEE 669 (856)
Q Consensus 590 ~~rlI~~DlDGTLl~~~~~~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~~~~lgliaenG~~I~~~~~~~ 669 (856)
|+|+|+||+||||++ +.+.+++++.++|+++ +++|+.|+++|||+...+.+++..+..-++++.||+.+...+...
T Consensus 4 M~kli~fDlDGTLl~---~~~~i~~~~~~al~~l-~~~G~~~~iaTGR~~~~~~~~~~~~~~~~~i~~nGa~i~~~~~~~ 79 (274)
T 3fzq_A 4 LYKLLILDIDGTLRD---EVYGIPESAKHAIRLC-QKNHCSVVICTGRSMGTIQDDVLSLGVDGYIAGGGNYIQYHGELL 79 (274)
T ss_dssp CCCEEEECSBTTTBB---TTTBCCHHHHHHHHHH-HHTTCEEEEECSSCTTTSCHHHHTTCCSEEEETTTTEEEETTEEE
T ss_pred cceEEEEECCCCCCC---CCCcCCHHHHHHHHHH-HHCCCEEEEEeCCChHHHHHHHHHcCCCEEEecCccEEEECCEEE
Confidence 689999999999999 8889999999999997 788999999999999999988876654457899999998765544
Q ss_pred eEecCCCCcccHHHHHHHHHHHHhhcCCcceEEecccceE----------------------Ee-----------eecC-
Q 003025 670 WQNCGQSVDFGWIQIAEPVMKLYTESTDGSYIEIKESALV----------------------WH-----------HRDA- 715 (856)
Q Consensus 670 w~~~~~~~~~~w~~~v~~i~~~~~~~~~Gs~ie~k~~~l~----------------------~~-----------~~~~- 715 (856)
+....+ .+.+.++++.+.+......+........ +. ....
T Consensus 80 ~~~~l~------~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (274)
T 3fzq_A 80 YNQSFN------QRLIKEVVCLLKKREVAFSIESQEKVFMNQKAKEIFETMNQLKGTNSCINKQHIQEKITYENNIEEYK 153 (274)
T ss_dssp EECCCC------HHHHHHHHHHHHHHTCEEEEECSSCEEECHHHHHHHHHHHHTTTSCCTTHHHHCCSSSCCCCCGGGCS
T ss_pred EEcCCC------HHHHHHHHHHHHHCCceEEEEeCCceEeCCchHHHHHHHHhhhccchhhhhhhhhhhcccccchhhhc
Confidence 443322 1233344443332111111111000000 00 0000
Q ss_pred CCCC---CchhHHHHHHHHHHHhcCCCeEEEEcC--eEEEEEeCCCCHHHHHHHHHHHhhhcCCCcceEEEEeCCchhHH
Q 003025 716 DPGF---GSSQAKELLDHLESVLANEPAAVKSGQ--FIVEVKPQGVSKGVVAEKIFTTMAESGRHADFVLCIGDDRSDED 790 (856)
Q Consensus 716 dp~~---~~~~a~el~~~L~~~l~~~~~~v~~g~--~~vEI~p~gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~ 790 (856)
.... ......+..+.+.+.+......+.++. .++||.|++++||.+++++++++ |++++++++|||+.||++
T Consensus 154 ~~~~~ki~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ei~~~~~~K~~~l~~l~~~l---gi~~~~~i~~GD~~NDi~ 230 (274)
T 3fzq_A 154 SQDIHKICLWSNEKVFDEVKDILQDKMELAQRDISSQYYEIIQKDFHKGKAIKRLQERL---GVTQKETICFGDGQNDIV 230 (274)
T ss_dssp SCCCCEEEEECCHHHHHHHHHHHGGGEEEEEEEGGGTEEEEEETTCSHHHHHHHHHHHH---TCCSTTEEEECCSGGGHH
T ss_pred ccCeEEEEEEcCHHHHHHHHHHhhcceEEEeccCCCceEEEeeCCCCHHHHHHHHHHHc---CCCHHHEEEECCChhHHH
Confidence 0000 000112233334334433334455666 89999999999999999999999 999999999999999999
Q ss_pred HHHHccccccCCCCCCCccEEEEEeCCC----ccccceEcCC--hhHHHHHHHHH
Q 003025 791 MFEIIGNATSSGVLSSNASVFACTVGQK----PSKAKYYLDD--AAEVVTMLEAL 839 (856)
Q Consensus 791 Mf~~ag~~~~~~~~~~~~~~~av~vG~~----~s~A~y~l~~--~~eV~~~L~~L 839 (856)
||+.+|. +|++|++ +..|+|++++ .++|+++|+++
T Consensus 231 m~~~ag~--------------~vam~na~~~~k~~A~~v~~~~~edGv~~~l~~~ 271 (274)
T 3fzq_A 231 MFQASDV--------------TIAMKNSHQQLKDIATSICEDIFDNGIYKELKRR 271 (274)
T ss_dssp HHHTCSE--------------EEEETTSCHHHHHHCSEEECCGGGTHHHHHHHHT
T ss_pred HHHhcCc--------------eEEecCccHHHHHhhhheeCCCchhHHHHHHHHh
Confidence 9999984 6888886 4778999864 68899999986
|
| >1rlm_A Phosphatase; HAD family, rossman fold, hydrolase; 1.90A {Escherichia coli} SCOP: c.108.1.10 PDB: 1rlt_A 1rlo_A* 2hf2_A | Back alignment and structure |
|---|
Probab=99.92 E-value=1.5e-23 Score=224.36 Aligned_cols=226 Identities=19% Similarity=0.246 Sum_probs=162.9
Q ss_pred CcEEEEEecCCCCCCCCCCCCCCCHHH-HHHHHHHHhhCCCeEEEecCCChhhHHHhhcCCC-CccEEeeCCEEEEeCCC
Q 003025 590 KSRAILFDYDGTVMPQTSINKAPSQAV-ISIINTLCNDARNTVFVVSGRGRDCLGKWFSPCK-KLGIAAEHGYFMRWSAD 667 (856)
Q Consensus 590 ~~rlI~~DlDGTLl~~~~~~~~~s~~~-~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~~~-~lgliaenG~~I~~~~~ 667 (856)
++|+|++|+||||++ +++.+++++ +++|++| +++|+.|+|+|||++..+.+++..+. ..+++++||+.+...+.
T Consensus 2 ~~kli~~DlDGTLl~---~~~~i~~~~~~~al~~l-~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~i~~~~~ 77 (271)
T 1rlm_A 2 AVKVIVTDMDGTFLN---DAKTYNQPRFMAQYQEL-KKRGIKFVVASGNQYYQLISFFPELKDEISFVAENGALVYEHGK 77 (271)
T ss_dssp CCCEEEECCCCCCSC---TTSCCCHHHHHHHHHHH-HHHTCEEEEECSSCHHHHGGGCTTTTTTSEEEEGGGTEEEETTE
T ss_pred CccEEEEeCCCCCCC---CCCcCCHHHHHHHHHHH-HHCCCEEEEEeCCcHHHHHHHHHhcCCCCEEEECCccEEEECCe
Confidence 479999999999999 788899995 9999997 77899999999999999999886653 45789999999987554
Q ss_pred cceEecCCCCcccHHHHHHHHHHHHhhcC---------CcceEEeccc------------ceEE--eeecCCCC------
Q 003025 668 EEWQNCGQSVDFGWIQIAEPVMKLYTEST---------DGSYIEIKES------------ALVW--HHRDADPG------ 718 (856)
Q Consensus 668 ~~w~~~~~~~~~~w~~~v~~i~~~~~~~~---------~Gs~ie~k~~------------~l~~--~~~~~dp~------ 718 (856)
..+....+ .+.+.++++.+.+.. .+.+...... .+.. .+......
T Consensus 78 ~i~~~~l~------~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ki~i 151 (271)
T 1rlm_A 78 QLFHGELT------RHESRIVIGELLKDKQLNFVACGLQSAYVSENAPEAFVALMAKHYHRLKPVKDYQEIDDVLFKFSL 151 (271)
T ss_dssp EEEECCCC------HHHHHHHHHHHHTCTTCEEEEEESSCEEEETTSCHHHHHHHHTTCSSEEEESCGGGCCSCEEEEEE
T ss_pred EEEEecCC------HHHHHHHHHHHHhCCCccEEEEeCCCEEeeCCCCHHHHHHHHHhCCCCEEeCchhhCCCceEEEEE
Confidence 34433221 234445555443321 1222211100 0000 00000000
Q ss_pred -CCchhHHHHHHHHHHHhcCCCeEEEEcCeEEEEEeCCCCHHHHHHHHHHHhhhcCCCcceEEEEeCCchhHHHHHHccc
Q 003025 719 -FGSSQAKELLDHLESVLANEPAAVKSGQFIVEVKPQGVSKGVVAEKIFTTMAESGRHADFVLCIGDDRSDEDMFEIIGN 797 (856)
Q Consensus 719 -~~~~~a~el~~~L~~~l~~~~~~v~~g~~~vEI~p~gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~ 797 (856)
.......++.+++.+.+......+.++..++||.|.+++||.+++++++++ |++++++++|||+.||++||+.+|.
T Consensus 152 ~~~~~~~~~~~~~l~~~~~~~~~~~~s~~~~~ei~~~~~~K~~~~~~l~~~l---~i~~~~~~~~GD~~nD~~m~~~ag~ 228 (271)
T 1rlm_A 152 NLPDEQIPLVIDKLHVALDGIMKPVTSGFGFIDLIIPGLHKANGISRLLKRW---DLSPQNVVAIGDSGNDAEMLKMARY 228 (271)
T ss_dssp ECCGGGHHHHHHHHHHHTTTSSEEEECSTTEEEEECTTCSHHHHHHHHHHHH---TCCGGGEEEEECSGGGHHHHHHCSE
T ss_pred EcCHHHHHHHHHHHHHHcCCcEEEEeccCCeEEEEcCCCChHHHHHHHHHHh---CCCHHHEEEECCcHHHHHHHHHcCC
Confidence 011235666777766565545566778889999999999999999999999 9999999999999999999999984
Q ss_pred cccCCCCCCCccEEEEEeCCC----ccccceEcCC--hhHHHHHHHHHHHh
Q 003025 798 ATSSGVLSSNASVFACTVGQK----PSKAKYYLDD--AAEVVTMLEALAEA 842 (856)
Q Consensus 798 ~~~~~~~~~~~~~~av~vG~~----~s~A~y~l~~--~~eV~~~L~~L~~~ 842 (856)
+|+||+. +..|+|++.+ .++|+++|+++...
T Consensus 229 --------------~va~~na~~~~k~~a~~v~~~~~~dGVa~~l~~~~~~ 265 (271)
T 1rlm_A 229 --------------SFAMGNAAENIKQIARYATDDNNHEGALNVIQAVLDN 265 (271)
T ss_dssp --------------EEECTTCCHHHHHHCSEECCCGGGTHHHHHHHHHHHT
T ss_pred --------------eEEeCCccHHHHHhCCeeCcCCCCChHHHHHHHHHhh
Confidence 6778876 3578999865 57899999998753
|
| >3r4c_A Hydrolase, haloacid dehalogenase-like hydrolase; haloalkanoate dehalogenase enzyme superfamily, phosphohydrol hydrolase; 1.82A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.91 E-value=7e-24 Score=225.84 Aligned_cols=223 Identities=18% Similarity=0.189 Sum_probs=150.3
Q ss_pred CCcEEEEEecCCCCCCCCCCCCCCCHHHHHHHHHHHhhCCCeEEEecCCChhhHHHhhcCCCCccEEeeCCEEE-EeCCC
Q 003025 589 SKSRAILFDYDGTVMPQTSINKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSPCKKLGIAAEHGYFM-RWSAD 667 (856)
Q Consensus 589 s~~rlI~~DlDGTLl~~~~~~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~~~~lgliaenG~~I-~~~~~ 667 (856)
.|+|+|+||+||||++. ..+.+++++.++|+++ ++.|+.|+++|||+...+ +.+..++-.++++.||+.+ ...+.
T Consensus 10 ~miKli~~DlDGTLl~~--~~~~i~~~~~~al~~l-~~~G~~~~iaTGR~~~~~-~~~~~l~~~~~i~~nGa~i~~~~~~ 85 (268)
T 3r4c_A 10 HMIKVLLLDVDGTLLSF--ETHKVSQSSIDALKKV-HDSGIKIVIATGRAASDL-HEIDAVPYDGVIALNGAECVLRDGS 85 (268)
T ss_dssp SCCCEEEECSBTTTBCT--TTCSCCHHHHHHHHHH-HHTTCEEEEECSSCTTCC-GGGTTSCCCEEEEGGGTEEEETTSC
T ss_pred CceEEEEEeCCCCCcCC--CCCcCCHHHHHHHHHH-HHCCCEEEEEcCCChHHh-HHHHhcCCCcEEEeCCcEEEEcCCe
Confidence 36899999999999982 2578999999999997 778999999999999887 4455555456899999999 76654
Q ss_pred cceEecCCCCcccHHHHHHHHHHHHhhcCCcceEEecccceEE--------eee---cCCCCCCc---------------
Q 003025 668 EEWQNCGQSVDFGWIQIAEPVMKLYTESTDGSYIEIKESALVW--------HHR---DADPGFGS--------------- 721 (856)
Q Consensus 668 ~~w~~~~~~~~~~w~~~v~~i~~~~~~~~~Gs~ie~k~~~l~~--------~~~---~~dp~~~~--------------- 721 (856)
..+.... + .+.+.++++.+.+..-...+......... .++ ...+....
T Consensus 86 ~~~~~~l---~---~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (268)
T 3r4c_A 86 VIRKVAI---P---AQDFRKSMELAREFDFAVALELNEGVFVNRLTPTVEQIAGIVEHPVPPVVDIEEMFERKECCQLCF 159 (268)
T ss_dssp EEEECCC---C---HHHHHHHHHHHHHTTCEEEEEETTEEEESCCCHHHHHHHHHHTCCCCCBCCHHHHHHHSCCCCEEE
T ss_pred EEEEecC---C---HHHHHHHHHHHHHcCcEEEEEECCEEEEeCCcHHHHHHHHHcCCCCCcccchHHHhccCceEEEEE
Confidence 3333322 1 23344444444332111111111100000 000 00000000
Q ss_pred hhHHHHHHHHHHHhcCCCeEEEEcCeEEEEEeCCCCHHHHHHHHHHHhhhcCCCcceEEEEeCCchhHHHHHHccccccC
Q 003025 722 SQAKELLDHLESVLANEPAAVKSGQFIVEVKPQGVSKGVVAEKIFTTMAESGRHADFVLCIGDDRSDEDMFEIIGNATSS 801 (856)
Q Consensus 722 ~~a~el~~~L~~~l~~~~~~v~~g~~~vEI~p~gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~ 801 (856)
....+....+.+.+.. ...+.++..++||.|+++|||.|++++++++ |++++++++|||+.||++||+.+|.
T Consensus 160 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~ei~~~~~~K~~~l~~l~~~l---gi~~~~~ia~GD~~NDi~m~~~ag~---- 231 (268)
T 3r4c_A 160 YFDEEAEQKVMPLLSG-LSATRWHPLFADVNVAGTSKATGLSLFADYY---RVKVSEIMACGDGGNDIPMLKAAGI---- 231 (268)
T ss_dssp ECCHHHHHHHGGGCTT-EEEEEEETTEEEEEETTCCHHHHHHHHHHHT---TCCGGGEEEEECSGGGHHHHHHSSE----
T ss_pred ecChHHHHHHHHhCCC-cEEEEecCCeEEEeeCCCCHHHHHHHHHHHc---CCCHHHEEEECCcHHhHHHHHhCCC----
Confidence 0001111222222221 2456678899999999999999999999999 9999999999999999999999984
Q ss_pred CCCCCCccEEEEEeCCC----ccccceEcC--ChhHHHHHHHHH
Q 003025 802 GVLSSNASVFACTVGQK----PSKAKYYLD--DAAEVVTMLEAL 839 (856)
Q Consensus 802 ~~~~~~~~~~av~vG~~----~s~A~y~l~--~~~eV~~~L~~L 839 (856)
+|+||++ +..|+|++. +.++|+++|+++
T Consensus 232 ----------~vam~na~~~~k~~Ad~v~~~~~edGv~~~l~~~ 265 (268)
T 3r4c_A 232 ----------GVAMGNASEKVQSVADFVTDTVDNSGLYKALKHF 265 (268)
T ss_dssp ----------EEECTTSCHHHHHTCSEECCCTTTTHHHHHHHHT
T ss_pred ----------eEEeCCCcHHHHHhcCEeeCCCCcCHHHHHHHHh
Confidence 7888886 467899985 578899999986
|
| >3mpo_A Predicted hydrolase of the HAD superfamily; SGX, PSI, structural genomics, protein structure initiative; 2.90A {Lactobacillus brevis} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.91 E-value=3.1e-24 Score=229.96 Aligned_cols=226 Identities=16% Similarity=0.172 Sum_probs=134.1
Q ss_pred CcEEEEEecCCCCCCCCCCCCCCCHHHHHHHHHHHhhCCCeEEEecCCChhhHHHhhcCCC----CccEEeeCCEEEEeC
Q 003025 590 KSRAILFDYDGTVMPQTSINKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSPCK----KLGIAAEHGYFMRWS 665 (856)
Q Consensus 590 ~~rlI~~DlDGTLl~~~~~~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~~~----~lgliaenG~~I~~~ 665 (856)
++|+|+||+||||++ +.+.++++++++|++| +++|+.|+++|||+...+.+++..+. ...++++||+.+...
T Consensus 4 ~~kli~~DlDGTLl~---~~~~i~~~~~~al~~l-~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~~~~i~~nGai~~~~ 79 (279)
T 3mpo_A 4 TIKLIAIDIDGTLLN---EKNELAQATIDAVQAA-KAQGIKVVLCTGRPLTGVQPYLDAMDIDGDDQYAITFNGSVAQTI 79 (279)
T ss_dssp -CCEEEECC--------------CHHHHHHHHHH-HHTTCEEEEECSSCHHHHHHHHHHTTCCSSSCEEEEGGGTEEEET
T ss_pred ceEEEEEcCcCCCCC---CCCcCCHHHHHHHHHH-HHCCCEEEEEcCCCHHHHHHHHHHcCCCCCCCEEEEcCcEEEECC
Confidence 489999999999999 8889999999999997 77899999999999999999886653 236899999944333
Q ss_pred CCcc-eEecCCCCcccHHHHHHHHHHHHhhcCCcceEEecccce-------------------EEeeec---C--CCCC-
Q 003025 666 ADEE-WQNCGQSVDFGWIQIAEPVMKLYTESTDGSYIEIKESAL-------------------VWHHRD---A--DPGF- 719 (856)
Q Consensus 666 ~~~~-w~~~~~~~~~~w~~~v~~i~~~~~~~~~Gs~ie~k~~~l-------------------~~~~~~---~--dp~~- 719 (856)
.+.. +.... + .+.+.++++.+.+..-...+....... ...+.. . +...
T Consensus 80 ~~~~~~~~~~---~---~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (279)
T 3mpo_A 80 SGKVLTNHSL---T---YEDYIDLEAWARKVRAHFQIETPDYIYTANKDISAYTIAESYLVRMLIQYREVSETPRDLTIS 153 (279)
T ss_dssp TSCEEEECCC---C---HHHHHHHHHHHHHTTCCEEEECSSCEEECCSBCCHHHHHHHHHHTCCEEECCGGGSCTTCCCC
T ss_pred CCCEEEecCC---C---HHHHHHHHHHHHHcCCeEEEEECCEEEEcCCcchHHHHHHhhccCCcceecCHHHhhccCCcE
Confidence 3332 22211 1 233444444443321111111110000 000000 0 0000
Q ss_pred ------CchhHHHHHHHHHHHhcCCCeEEEEcCeEEEEEeCCCCHHHHHHHHHHHhhhcCCCcceEEEEeCCchhHHHHH
Q 003025 720 ------GSSQAKELLDHLESVLANEPAAVKSGQFIVEVKPQGVSKGVVAEKIFTTMAESGRHADFVLCIGDDRSDEDMFE 793 (856)
Q Consensus 720 ------~~~~a~el~~~L~~~l~~~~~~v~~g~~~vEI~p~gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~ 793 (856)
......++.+.+.+.+.+....+.++..++||+|+++|||.+++++++++ |++++++++|||+.||++||+
T Consensus 154 ki~~~~~~~~~~~~~~~l~~~~~~~~~~~~s~~~~~ei~~~~~~K~~~l~~l~~~l---gi~~~~~i~~GD~~NDi~m~~ 230 (279)
T 3mpo_A 154 KAMFVDYPQVIEQVKANMPQDFKDRFSVVQSAPYFIEVMNRRASKGGTLSELVDQL---GLTADDVMTLGDQGNDLTMIK 230 (279)
T ss_dssp EEEEECCHHHHHHHHHHCCHHHHHHEEEECCSSSEEEEEESSCCHHHHHHHHHHHT---TCCGGGEEEC--CCTTHHHHH
T ss_pred EEEEcCCHHHHHHHHHHHHHHhCCCEEEEEecCceEEEecCCCChHHHHHHHHHHc---CCCHHHEEEECCchhhHHHHH
Confidence 01223344444433333333566788999999999999999999999999 999999999999999999999
Q ss_pred HccccccCCCCCCCccEEEEEeCCC----ccccceEcC--ChhHHHHHHHHHHHh
Q 003025 794 IIGNATSSGVLSSNASVFACTVGQK----PSKAKYYLD--DAAEVVTMLEALAEA 842 (856)
Q Consensus 794 ~ag~~~~~~~~~~~~~~~av~vG~~----~s~A~y~l~--~~~eV~~~L~~L~~~ 842 (856)
.+|. +|+||++ +..|+|++. +.++|+++|+++...
T Consensus 231 ~ag~--------------~vam~na~~~~k~~A~~v~~~~~e~Gv~~~i~~~~~~ 271 (279)
T 3mpo_A 231 YAGL--------------GVAMGNAIDEVKEAAQAVTLTNAENGVAAAIRKYALN 271 (279)
T ss_dssp HSTE--------------ECBC---CCHHHHHCSCBC------CHHHHHC-----
T ss_pred hcCc--------------eeeccCCCHHHHHhcceeccCCCccHHHHHHHHHhcc
Confidence 9985 6777775 477889885 467899999998754
|
| >1rkq_A Hypothetical protein YIDA; two domain structure with beta-alpha sandwich. stucture contains A magnesium ION., PSI, protein structure initiative; 1.40A {Escherichia coli} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=99.91 E-value=1.3e-23 Score=226.42 Aligned_cols=228 Identities=15% Similarity=0.201 Sum_probs=153.9
Q ss_pred CcEEEEEecCCCCCCCCCCCCCCCHHHHHHHHHHHhhCCCeEEEecCCChhhHHHhhcCCCC----ccEEeeCCEEEEeC
Q 003025 590 KSRAILFDYDGTVMPQTSINKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSPCKK----LGIAAEHGYFMRWS 665 (856)
Q Consensus 590 ~~rlI~~DlDGTLl~~~~~~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~~~~----lgliaenG~~I~~~ 665 (856)
|+|+|++|+||||++ .++.++++++++|++| +++|+.|+++|||+...+..++..+.- ..++++||+.|...
T Consensus 4 m~kli~~DlDGTLl~---~~~~i~~~~~~aL~~l-~~~Gi~vviaTGR~~~~~~~~~~~l~l~~~~~~~I~~NGa~i~~~ 79 (282)
T 1rkq_A 4 AIKLIAIDMDGTLLL---PDHTISPAVKNAIAAA-RARGVNVVLTTGRPYAGVHNYLKELHMEQPGDYCITYNGALVQKA 79 (282)
T ss_dssp CCCEEEECCCCCCSC---TTSCCCHHHHHHHHHH-HHTTCEEEEECSSCGGGTHHHHHHTTCCSTTCEEEEGGGTEEEET
T ss_pred cceEEEEeCCCCCCC---CCCcCCHHHHHHHHHH-HHCCCEEEEEcCCCHHHHHHHHHHhCCCCCCCeEEEeCCeEEEEC
Confidence 579999999999999 7889999999999997 788999999999999999988866532 25899999999873
Q ss_pred --CCcceEecCCCCcccHHHHHHHHHHHHh-----hcCCcceEEecc---c--------ceEEee---ecC--CCCCC--
Q 003025 666 --ADEEWQNCGQSVDFGWIQIAEPVMKLYT-----ESTDGSYIEIKE---S--------ALVWHH---RDA--DPGFG-- 720 (856)
Q Consensus 666 --~~~~w~~~~~~~~~~w~~~v~~i~~~~~-----~~~~Gs~ie~k~---~--------~l~~~~---~~~--dp~~~-- 720 (856)
+...+.... +.++...+.+.++.+- ....+.+.+... . .+.... ... +....
T Consensus 80 ~~~~~i~~~~l---~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ki 156 (282)
T 1rkq_A 80 ADGSTVAQTAL---SYDDYRFLEKLSREVGSHFHALDRTTLYTANRDISYYTVHESFVATIPLVFCEAEKMDPNTQFLKV 156 (282)
T ss_dssp TTCCEEEECCB---CHHHHHHHHHHHHHHTCEEEEECSSCEEECCSSCCHHHHHHHHHTTCCEEECCGGGSCTTCCBCEE
T ss_pred CCCeEEEEecC---CHHHHHHHHHHHHHcCCEEEEEECCEEEEcCCchhHHHHHHhhhccCCccccchhHhcccCCceEE
Confidence 333344322 2222222222222210 001122222110 0 000000 000 00000
Q ss_pred -----chhHHHHHHHHHHHhcCCCeEEEEcCeEEEEEeCCCCHHHHHHHHHHHhhhcCCCcceEEEEeCCchhHHHHHHc
Q 003025 721 -----SSQAKELLDHLESVLANEPAAVKSGQFIVEVKPQGVSKGVVAEKIFTTMAESGRHADFVLCIGDDRSDEDMFEII 795 (856)
Q Consensus 721 -----~~~a~el~~~L~~~l~~~~~~v~~g~~~vEI~p~gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~a 795 (856)
.....++.+.+.+.+......+.++..++||.|++++||.+++++++++ |++++++++|||+.||++||+.+
T Consensus 157 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~s~~~~lei~~~~~~K~~~l~~l~~~~---~~~~~~~~~~GD~~nD~~m~~~a 233 (282)
T 1rkq_A 157 MMIDEPAILDQAIARIPQEVKEKYTVLKSAPYFLEILDKRVNKGTGVKSLADVL---GIKPEEIMAIGDQENDIAMIEYA 233 (282)
T ss_dssp EEECCHHHHHHHHHHSCHHHHHHEEEEEEETTEEEEEETTCSHHHHHHHHHHHH---TCCGGGEEEEECSGGGHHHHHHS
T ss_pred EEECCHHHHHHHHHHHHHHhcCCEEEEEeCCceEEecCCCCCCHHHHHHHHHHh---CCCHHHEEEECCcHHHHHHHHHC
Confidence 0122333333332232222345578889999999999999999999999 99999999999999999999999
Q ss_pred cccccCCCCCCCccEEEEEeCCC----ccccceEcCC--hhHHHHHHHHHHH
Q 003025 796 GNATSSGVLSSNASVFACTVGQK----PSKAKYYLDD--AAEVVTMLEALAE 841 (856)
Q Consensus 796 g~~~~~~~~~~~~~~~av~vG~~----~s~A~y~l~~--~~eV~~~L~~L~~ 841 (856)
|. +|+||+. +..|+|++++ .++|+++|+++..
T Consensus 234 g~--------------~va~~n~~~~~~~~a~~v~~~~~~dGV~~~l~~~~~ 271 (282)
T 1rkq_A 234 GV--------------GVAVDNAIPSVKEVANFVTKSNLEDGVAFAIEKYVL 271 (282)
T ss_dssp SE--------------EEECTTSCHHHHHHCSEECCCTTTTHHHHHHHHHTT
T ss_pred Cc--------------EEEecCCcHHHHhhCCEEecCCCcchHHHHHHHHHh
Confidence 84 6888875 3578999864 6789999999863
|
| >2pq0_A Hypothetical conserved protein GK1056; hyopthetical protein, structural genomics, unknown function; 2.60A {Geobacillus kaustophilus} PDB: 2qyh_A | Back alignment and structure |
|---|
Probab=99.91 E-value=1.6e-23 Score=222.11 Aligned_cols=223 Identities=16% Similarity=0.168 Sum_probs=151.5
Q ss_pred CcEEEEEecCCCCCCCCCCCCCCCHHHHHHHHHHHhhCCCeEEEecCCChhhHHHhhcCCCCccEEeeCCEEEEeCCCcc
Q 003025 590 KSRAILFDYDGTVMPQTSINKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSPCKKLGIAAEHGYFMRWSADEE 669 (856)
Q Consensus 590 ~~rlI~~DlDGTLl~~~~~~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~~~~lgliaenG~~I~~~~~~~ 669 (856)
++|+|+||+||||++ +++.++++++++|+++ ++.|+.|+++|||+...+..++..+.--++++.||+++...+...
T Consensus 2 ~~kli~~DlDGTLl~---~~~~i~~~~~~al~~l-~~~G~~~~~aTGR~~~~~~~~~~~l~~~~~i~~nGa~i~~~~~~i 77 (258)
T 2pq0_A 2 GRKIVFFDIDGTLLD---EQKQLPLSTIEAVRRL-KQSGVYVAIATGRAPFMFEHVRKQLGIDSFVSFNGQYVVFEGNVL 77 (258)
T ss_dssp CCCEEEECTBTTTBC---TTSCCCHHHHHHHHHH-HHTTCEEEEECSSCGGGSHHHHHHHTCCCEEEGGGTEEEETTEEE
T ss_pred CceEEEEeCCCCCcC---CCCccCHHHHHHHHHH-HHCCCEEEEECCCChHHHHHHHHhcCCCEEEECCCCEEEECCEEE
Confidence 368999999999999 7788999999999997 888999999999999998888765432247899999998755433
Q ss_pred eEecCCCCcccHHHHHHHHHHHHhhcCCcceEEecccceE----------------EeeecCCCC------CC---chhH
Q 003025 670 WQNCGQSVDFGWIQIAEPVMKLYTESTDGSYIEIKESALV----------------WHHRDADPG------FG---SSQA 724 (856)
Q Consensus 670 w~~~~~~~~~~w~~~v~~i~~~~~~~~~Gs~ie~k~~~l~----------------~~~~~~dp~------~~---~~~a 724 (856)
+....+ .+.+.++++.+.+..-...+........ ..+....+. .. ....
T Consensus 78 ~~~~~~------~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~ 151 (258)
T 2pq0_A 78 YKQPLR------REKVRALTEEAHKNGHPLVFMDAEKMRASIGDHPHIHVSMASLKFAHPPVDPLYYENKDIYQALLFCR 151 (258)
T ss_dssp EECCCC------HHHHHHHHHHHHHTTCCEEEECSSCEEESSSSCHHHHHHHHHTTCCCCCBCTTGGGGSCCCEEEECSC
T ss_pred EEecCC------HHHHHHHHHHHHhCCCeEEEEeCCcEEEecCCcHHHHHHHHhhcCCccccccchhhccCceEEEEECC
Confidence 333221 2344455544433211001110000000 000000000 00 0000
Q ss_pred HHHHHHHHHHhcCCCeEEEEcCeEEEEEeCCCCHHHHHHHHHHHhhhcCCCcceEEEEeCCchhHHHHHHccccccCCCC
Q 003025 725 KELLDHLESVLANEPAAVKSGQFIVEVKPQGVSKGVVAEKIFTTMAESGRHADFVLCIGDDRSDEDMFEIIGNATSSGVL 804 (856)
Q Consensus 725 ~el~~~L~~~l~~~~~~v~~g~~~vEI~p~gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~ 804 (856)
++....+.+.+.. ...+.+++.++||.|+++|||.|++++++++ |++++++++|||+.||++||+.+|.
T Consensus 152 ~~~~~~~~~~~~~-~~~~~~~~~~~ei~~~~~~K~~~l~~l~~~l---gi~~~~~ia~GDs~NDi~ml~~ag~------- 220 (258)
T 2pq0_A 152 AEEEEPYVRNYPE-FRFVRWHDVSTDVLPAGGSKAEGIRMMIEKL---GIDKKDVYAFGDGLNDIEMLSFVGT------- 220 (258)
T ss_dssp HHHHHHHHHHCTT-EEEEEEETTEEEEEESSCCHHHHHHHHHHHH---TCCGGGEEEECCSGGGHHHHHHSSE-------
T ss_pred HHHHHHHHHhCCC-eEEEEeCCceEEEEECCCChHHHHHHHHHHh---CCCHHHEEEECCcHHhHHHHHhCCc-------
Confidence 1222223333322 2345567889999999999999999999999 9999999999999999999999985
Q ss_pred CCCccEEEEEeCCC----ccccceEcC--ChhHHHHHHHHHH
Q 003025 805 SSNASVFACTVGQK----PSKAKYYLD--DAAEVVTMLEALA 840 (856)
Q Consensus 805 ~~~~~~~av~vG~~----~s~A~y~l~--~~~eV~~~L~~L~ 840 (856)
+|+||+. +..|+|++. +.++|+++|+++.
T Consensus 221 -------~vam~na~~~~k~~A~~v~~~~~~dGva~~i~~~~ 255 (258)
T 2pq0_A 221 -------GVAMGNAHEEVKRVADFVTKPVDKEGIWYGLKQLQ 255 (258)
T ss_dssp -------EEEETTCCHHHHHTCSEEECCGGGTHHHHHHHHTT
T ss_pred -------EEEeCCCcHHHHHhCCEEeCCCCcchHHHHHHHhC
Confidence 6778875 467999985 4688999999864
|
| >2b30_A Pvivax hypothetical protein; SGPP, structural genomics, PSI, protein structure initiative; 2.70A {Plasmodium vivax} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=99.91 E-value=2.3e-23 Score=226.65 Aligned_cols=226 Identities=17% Similarity=0.161 Sum_probs=156.8
Q ss_pred CcEEEEEecCCCCCCCCCC-CCCCCHHHHHHHHHHHhhCCCeEEEecCCChhhHHHhh--cCCC--C---ccEEeeCCEE
Q 003025 590 KSRAILFDYDGTVMPQTSI-NKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWF--SPCK--K---LGIAAEHGYF 661 (856)
Q Consensus 590 ~~rlI~~DlDGTLl~~~~~-~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~--~~~~--~---lgliaenG~~ 661 (856)
++|+|++|+||||++ . ++.++++++++|++| ++.|+.|+|+|||+...+..++ ..++ . .+++++||+.
T Consensus 26 ~ikli~~DlDGTLl~---~~~~~is~~~~~al~~l-~~~Gi~v~iaTGR~~~~~~~~~~~~~l~~~~~~~~~~I~~NGa~ 101 (301)
T 2b30_A 26 DIKLLLIDFDGTLFV---DKDIKVPSENIDAIKEA-IEKGYMVSICTGRSKVGILSAFGEENLKKMNFYGMPGVYINGTI 101 (301)
T ss_dssp CCCEEEEETBTTTBC---CTTTCSCHHHHHHHHHH-HHHTCEEEEECSSCHHHHHHHHCHHHHHHHTCCSCSEEEGGGTE
T ss_pred cccEEEEECCCCCcC---CCCCccCHHHHHHHHHH-HHCCCEEEEEcCCCHHHHHHHhhHHhhcccccCCCeEEEcCCeE
Confidence 489999999999999 7 789999999999997 7789999999999999998888 5443 1 4689999999
Q ss_pred EEe-CCCcceEecCCCCcccHHHHHHHHHHHHhhc----------CCcceEEecc-cc--------eEEeeecC-----C
Q 003025 662 MRW-SADEEWQNCGQSVDFGWIQIAEPVMKLYTES----------TDGSYIEIKE-SA--------LVWHHRDA-----D 716 (856)
Q Consensus 662 I~~-~~~~~w~~~~~~~~~~w~~~v~~i~~~~~~~----------~~Gs~ie~k~-~~--------l~~~~~~~-----d 716 (856)
|.. .+...+...++ . +.+.++++.+.+. ..+.+.+... .. ..+++... +
T Consensus 102 i~~~~~~~i~~~~l~---~---~~~~~i~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (301)
T 2b30_A 102 VYDQIGYTLLDETIE---T---DVYAELISYLVEKNLVNQTIFHRGESNYVTEDNKYADFLQKMYSENRSIIIRHNEMLK 175 (301)
T ss_dssp EECTTCCEEEECCCC---H---HHHHHHHHHHHHTTCGGGEEEEETTEEEEETTCTTTTHHHHHHSCCCCEEECHHHHTT
T ss_pred EEeCCCCEEEEccCC---H---HHHHHHHHHHHHcCCceEEEEEeCCEEEEcCchHHHHHHHHhhccCCceeecchhhhc
Confidence 987 33333433222 1 2233333322221 1112221110 00 00011100 0
Q ss_pred C-CC-------CchhHHHHHHHHHHHhcCCCeEEEEcCeEEEEEeCCCCHHHHHHHHHHHhhhcCCCcceEEEEeCCchh
Q 003025 717 P-GF-------GSSQAKELLDHLESVLANEPAAVKSGQFIVEVKPQGVSKGVVAEKIFTTMAESGRHADFVLCIGDDRSD 788 (856)
Q Consensus 717 p-~~-------~~~~a~el~~~L~~~l~~~~~~v~~g~~~vEI~p~gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND 788 (856)
. .. ......++.+.+.+.+......+.++..++||.|++++||.+++++++++ |++++++++|||+.||
T Consensus 176 ~~~i~ki~~~~~~~~~~~~~~~l~~~~~~~~~~~~s~~~~lei~~~~~~K~~~l~~l~~~~---~~~~~~~~~~GD~~nD 252 (301)
T 2b30_A 176 YRTMNKLMIVLDPSESKTVIGNLKQKFKNKLTIFTTYNGHAEVTKLGHDKYTGINYLLKHY---NISNDQVLVVGDAEND 252 (301)
T ss_dssp CCCCSEEEECCCTTTHHHHHHHHHHHSTTTEEEEECTTSCEEEEETTCCHHHHHHHHHHHT---TCCGGGEEEEECSGGG
T ss_pred cCCceEEEEECCHHHHHHHHHHHHHHhcCCEEEEEeCCcceEecCCCCCcHHHHHHHHHHc---CCCHHHEEEECCCHHH
Confidence 0 00 01234556666655443333445567889999999999999999999999 9999999999999999
Q ss_pred HHHHHHccccccCCCCCCCccEEEEEeCCC----ccccceEcC-C--hhHHHHHHHHHHHh
Q 003025 789 EDMFEIIGNATSSGVLSSNASVFACTVGQK----PSKAKYYLD-D--AAEVVTMLEALAEA 842 (856)
Q Consensus 789 ~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~----~s~A~y~l~-~--~~eV~~~L~~L~~~ 842 (856)
++||+.+|. +|+||+. +..|+|+++ + .++|+++|+++...
T Consensus 253 ~~m~~~ag~--------------~va~~na~~~~k~~a~~v~~~~~~~dGVa~~l~~~~~~ 299 (301)
T 2b30_A 253 IAMLSNFKY--------------SFAVANATDSAKSHAKCVLPVSHREGAVAYLLKKVFDL 299 (301)
T ss_dssp HHHHHSCSE--------------EEECTTCCHHHHHHSSEECSSCTTTTHHHHHHHHHHTT
T ss_pred HHHHHHcCC--------------eEEEcCCcHHHHhhCCEEEccCCCCcHHHHHHHHHHhc
Confidence 999999984 6788875 357899887 5 57899999998643
|
| >1nf2_A Phosphatase; structural proteomics, HAD NEW fold, structural genomics, BSGC structure funded by NIH structure initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=99.90 E-value=7.7e-23 Score=218.54 Aligned_cols=223 Identities=19% Similarity=0.177 Sum_probs=154.6
Q ss_pred CcEEEEEecCCCCCCCCCCCCCCCHHHHHHHHHHHhhCCCeEEEecCCChhhHHHhhcCCC-Cc-cEEeeCCEEEEeC-C
Q 003025 590 KSRAILFDYDGTVMPQTSINKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSPCK-KL-GIAAEHGYFMRWS-A 666 (856)
Q Consensus 590 ~~rlI~~DlDGTLl~~~~~~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~~~-~l-gliaenG~~I~~~-~ 666 (856)
|+|+|++|+||||++ +++.++++++++|++ +++|+.|+++|||+...+..++..++ .. +++++||+.+... +
T Consensus 1 mikli~~DlDGTLl~---~~~~i~~~~~~al~~--~~~Gi~v~iaTGR~~~~~~~~~~~l~~~~~~~I~~NGa~i~~~~~ 75 (268)
T 1nf2_A 1 MYRVFVFDLDGTLLN---DNLEISEKDRRNIEK--LSRKCYVVFASGRMLVSTLNVEKKYFKRTFPTIAYNGAIVYLPEE 75 (268)
T ss_dssp CBCEEEEECCCCCSC---TTSCCCHHHHHHHHH--HTTTSEEEEECSSCHHHHHHHHHHHSSSCCCEEEGGGTEEEETTT
T ss_pred CccEEEEeCCCcCCC---CCCccCHHHHHHHHH--HhCCCEEEEECCCChHHHHHHHHHhCCCCCeEEEeCCeEEECCCC
Confidence 479999999999999 788999999999999 67899999999999999998886653 22 6899999999874 3
Q ss_pred CcceEecCCCCcccHHHHHHHHHHHHhhc--------CCcceEEecc---------cceEEe-eecC-C----CCCC---
Q 003025 667 DEEWQNCGQSVDFGWIQIAEPVMKLYTES--------TDGSYIEIKE---------SALVWH-HRDA-D----PGFG--- 720 (856)
Q Consensus 667 ~~~w~~~~~~~~~~w~~~v~~i~~~~~~~--------~~Gs~ie~k~---------~~l~~~-~~~~-d----p~~~--- 720 (856)
...+... .+. +.+.++++.+.+. ..+.+.+... ..+... +... + ..+.
T Consensus 76 ~~i~~~~---l~~---~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ki~ 149 (268)
T 1nf2_A 76 GVILNEK---IPP---EVAKDIIEYIKPLNVHWQAYIDDVLYSEKDNEEIKSYARHSNVDYRVEPNLSELVSKMGTTKLL 149 (268)
T ss_dssp EEEEECC---BCH---HHHHHHHHHHGGGCCCEEEECSSCEEESSCCHHHHHHHHHTTCCEEECTTHHHHHHHHCBSEEE
T ss_pred CEEEecC---CCH---HHHHHHHHHHHhCCCEEEEEECCEEEECCChHHHHHHHhhcCCceEecCCHHHhcccCCceEEE
Confidence 3233322 222 2333444433321 1122221110 000000 0000 0 0000
Q ss_pred ----chhHHHHHHHHHHHhcCCCeEEEEcCeEEEEEeCCCCHHHHHHHHHHHhhhcCCCcceEEEEeCCchhHHHHHHcc
Q 003025 721 ----SSQAKELLDHLESVLANEPAAVKSGQFIVEVKPQGVSKGVVAEKIFTTMAESGRHADFVLCIGDDRSDEDMFEIIG 796 (856)
Q Consensus 721 ----~~~a~el~~~L~~~l~~~~~~v~~g~~~vEI~p~gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag 796 (856)
.....++.+.+.+.+......+.++..++||.|++++||.+++.+++++ |++++++++|||+.||++|++.+|
T Consensus 150 ~~~~~~~~~~~~~~l~~~~~~~~~~~~s~~~~~ei~~~~~~K~~~~~~~~~~~---~~~~~~~~~~GD~~nD~~~~~~ag 226 (268)
T 1nf2_A 150 LIDTPERLDELKEILSERFKDVVKVFKSFPTYLEIVPKNVDKGKALRFLRERM---NWKKEEIVVFGDNENDLFMFEEAG 226 (268)
T ss_dssp EECCHHHHHHHHHHHHHHHTTTSEEEEEETTEEEEECTTCCHHHHHHHHHHHH---TCCGGGEEEEECSHHHHHHHTTCS
T ss_pred EECCHHHHHHHHHHHHHHhcCCEEEEEecCceEEEeCCCCChHHHHHHHHHHc---CCCHHHeEEEcCchhhHHHHHHcC
Confidence 0123344555554454444555678889999999999999999999999 999999999999999999999998
Q ss_pred ccccCCCCCCCccEEEEEeCCC----ccccceEcCC--hhHHHHHHHHHH
Q 003025 797 NATSSGVLSSNASVFACTVGQK----PSKAKYYLDD--AAEVVTMLEALA 840 (856)
Q Consensus 797 ~~~~~~~~~~~~~~~av~vG~~----~s~A~y~l~~--~~eV~~~L~~L~ 840 (856)
. +|++|+. +..|+|++.+ .++|+++|+++.
T Consensus 227 ~--------------~v~~~n~~~~~~~~a~~v~~~~~~dGv~~~i~~~~ 262 (268)
T 1nf2_A 227 L--------------RVAMENAIEKVKEASDIVTLTNNDSGVSYVLERIS 262 (268)
T ss_dssp E--------------EEECTTSCHHHHHHCSEECCCTTTTHHHHHHTTBC
T ss_pred C--------------EEEecCCCHHHHhhCCEEEccCCcchHHHHHHHHH
Confidence 4 6888875 3568898864 678999998875
|
| >2fue_A PMM 1, PMMH-22, phosphomannomutase 1; enzyme-product complex, protein glycosyl carbohydrate-deficient glycoprotein syndrome; HET: MSE M1P; 1.75A {Homo sapiens} SCOP: c.108.1.10 PDB: 2fuc_A* | Back alignment and structure |
|---|
Probab=99.90 E-value=1.6e-23 Score=223.16 Aligned_cols=219 Identities=17% Similarity=0.218 Sum_probs=138.6
Q ss_pred HHHHHcCCcEEEEEecCCCCCCCCCCCCCCCHHHHHHHHHHHhhCCCeEEEecCCChhhHHHhhcCC-----CCccEEee
Q 003025 583 VSAYLRSKSRAILFDYDGTVMPQTSINKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSPC-----KKLGIAAE 657 (856)
Q Consensus 583 ~~~y~~s~~rlI~~DlDGTLl~~~~~~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~~-----~~lgliae 657 (856)
..+|+..++|+|++|+||||++ .++.++++++++|++| +++ +.|+|+|||+...+.+.++.. ...+++++
T Consensus 5 ~~~~~~~~~kli~~DlDGTLl~---~~~~is~~~~~al~~l-~~~-i~v~iaTGR~~~~~~~~l~~~~~~~~~~~~~I~~ 79 (262)
T 2fue_A 5 AQAARRKERVLCLFDVDGTLTP---ARQKIDPEVAAFLQKL-RSR-VQIGVVGGSDYCKIAEQLGDGDEVIEKFDYVFAE 79 (262)
T ss_dssp --------CEEEEEESBTTTBS---TTSCCCHHHHHHHHHH-TTT-SEEEEECSSCHHHHHHHHSSTTTHHHHCSEEEEG
T ss_pred cccccccCeEEEEEeCccCCCC---CCCcCCHHHHHHHHHH-HhC-CEEEEEcCCCHHHHHHHHhhhhcccccCCeEEEC
Confidence 3567788899999999999999 7889999999999997 777 999999999999988888531 12358999
Q ss_pred CCEEEEeCCCcceEecCCC-CcccHHHHHHHHHHHHhh--------cCCcceEEecccceEEe-e-ecCCCC----CCc-
Q 003025 658 HGYFMRWSADEEWQNCGQS-VDFGWIQIAEPVMKLYTE--------STDGSYIEIKESALVWH-H-RDADPG----FGS- 721 (856)
Q Consensus 658 nG~~I~~~~~~~w~~~~~~-~~~~w~~~v~~i~~~~~~--------~~~Gs~ie~k~~~l~~~-~-~~~dp~----~~~- 721 (856)
||++|+.++...+...+.. .+ .+.+.++++...+ ..++.+.+.+...+.+. + +..+.+ +..
T Consensus 80 NGa~i~~~~~~i~~~~~~~~l~---~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (262)
T 2fue_A 80 NGTVQYKHGRLLSKQTIQNHLG---EELLQDLINFCLSYMALLRLPKKRGTFIEFRNGMLNISPIGRSCTLEERIEFSEL 156 (262)
T ss_dssp GGTEEEETTEECCCCCHHHHHC---HHHHHHHHHHHHHHHHTCCCSCCCSCSEEECSSCEEECSSCTTCCHHHHHHHHHH
T ss_pred CCcEEEeCCeEEEEeeccccCC---HHHHHHHHHHHHHcCceEEEEeCCeEEEechHHhhhHHhhcCCCcccccccEEEE
Confidence 9999987544333322100 01 2333333332211 12344444332211111 0 101000 000
Q ss_pred ----hhHHHHHHHHHHHhcCCCeEEE-EcCeEEEEEeCCCCHHHHHHHHHHHhhhcCCCcceEEEEeC----CchhHHHH
Q 003025 722 ----SQAKELLDHLESVLANEPAAVK-SGQFIVEVKPQGVSKGVVAEKIFTTMAESGRHADFVLCIGD----DRSDEDMF 792 (856)
Q Consensus 722 ----~~a~el~~~L~~~l~~~~~~v~-~g~~~vEI~p~gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD----~~ND~~Mf 792 (856)
....++.+.+.+.+.+..+.+. ++..++||.|+++|||.|+++| + |+++++++|||| +.||++||
T Consensus 157 ~~~~~~~~~~~~~l~~~~~~~~~~~~~s~~~~leI~~~~vsKg~al~~l---~---gi~~~~viafGDs~~~~~NDi~Ml 230 (262)
T 2fue_A 157 DKKEKIREKFVEALKTEFAGKGLRFSRGGMISFDVFPEGWDKRYCLDSL---D---QDSFDTIHFFGNETSPGGNDFEIF 230 (262)
T ss_dssp HHHHCHHHHHHHHHHHHTTTSCEEEECCSSSCEEEEETTCSTTHHHHHH---T---TSCCSEEEEEESCCSTTSTTHHHH
T ss_pred cCCHHHHHHHHHHHHHhCCCceEEEEECCCcEEEEecCCCCHHHHHHHH---H---CCCHHHEEEECCCCCCCCCCHHHH
Confidence 0122334445444443234444 4678999999999999999999 6 999999999999 99999999
Q ss_pred HHccccccCCCCCCCccEEEEEeCCC----ccccceEcCC
Q 003025 793 EIIGNATSSGVLSSNASVFACTVGQK----PSKAKYYLDD 828 (856)
Q Consensus 793 ~~ag~~~~~~~~~~~~~~~av~vG~~----~s~A~y~l~~ 828 (856)
+.+|. .+++|||+ +..|+|++++
T Consensus 231 ~~~~~-------------~g~av~NA~~~~k~~a~~v~~~ 257 (262)
T 2fue_A 231 ADPRT-------------VGHSVVSPQDTVQRCREIFFPE 257 (262)
T ss_dssp HSTTS-------------EEEECSSHHHHHHHHHHHHCTT
T ss_pred hcCcc-------------CcEEecCCCHHHHHhhheeCCC
Confidence 99874 36777875 4566776654
|
| >1xvi_A MPGP, YEDP, putative mannosyl-3-phosphoglycerate phosphatase; hypothetical protein, conserved protein, phophatase-like domain; HET: 1PE PG4 PGE; 2.26A {Escherichia coli K12} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=99.90 E-value=5.5e-23 Score=220.68 Aligned_cols=225 Identities=15% Similarity=0.116 Sum_probs=130.0
Q ss_pred CcEEEEEecCCCCCCCCCCCCCCCHHHHHHHHHHHhhCCCeEEEecCCChhhHHHhhcCCCC--ccEEeeCCEEEEeCC-
Q 003025 590 KSRAILFDYDGTVMPQTSINKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSPCKK--LGIAAEHGYFMRWSA- 666 (856)
Q Consensus 590 ~~rlI~~DlDGTLl~~~~~~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~~~~--lgliaenG~~I~~~~- 666 (856)
++|+|++|+||||++ .++.++++++++|++| +++|+.|+|+|||+...+..++..+.- .+++++||++|+..+
T Consensus 8 ~~~li~~DlDGTLl~---~~~~~~~~~~~~l~~l-~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~~I~~NGa~i~~~~~ 83 (275)
T 1xvi_A 8 QPLLVFSDLDGTLLD---SHSYDWQPAAPWLTRL-REANVPVILCSSKTSAEMLYLQKTLGLQGLPLIAENGAVIQLAEQ 83 (275)
T ss_dssp CCEEEEEECTTTTSC---SSCCSCCTTHHHHHHH-HHTTCCEEEECSSCHHHHHHHHHHTTCTTSCEEEGGGTEEECCTT
T ss_pred CceEEEEeCCCCCCC---CCCcCCHHHHHHHHHH-HHCCCeEEEEcCCCHHHHHHHHHHcCCCCCeEEEeCCCeEEecCc
Confidence 579999999999998 6667778899999997 788999999999999999999876542 269999999997332
Q ss_pred Cc------ceEecCCCCcccHHHHHHHHHHHHhhcCCcceEEecccc-------eEEee-----ecCCCCCC----chhH
Q 003025 667 DE------EWQNCGQSVDFGWIQIAEPVMKLYTESTDGSYIEIKESA-------LVWHH-----RDADPGFG----SSQA 724 (856)
Q Consensus 667 ~~------~w~~~~~~~~~~w~~~v~~i~~~~~~~~~Gs~ie~k~~~-------l~~~~-----~~~dp~~~----~~~a 724 (856)
.. .+....+ . +.+.++++.+.+.....+....... ....+ ... .++. ....
T Consensus 84 ~~~~~~~~~~~~~l~---~---~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 156 (275)
T 1xvi_A 84 WQEIDGFPRIISGIS---H---GEISLVLNTLREKEHFKFTTFDDVDDATIAEWTGLSRSQAALTQL-HEASVTLIWRDS 156 (275)
T ss_dssp CTTSTTTTEEECSSC---H---HHHHHHHHHHHHHHCCCEEEGGGSCHHHHHHHHCCCHHHHHHHHC-CSSCEEEEECSC
T ss_pred ccccCceEEEecCCC---H---HHHHHHHHHHHHhhCcceeccCcCCHHHHHHhhCCchHHHHHHHh-hccCceeEecCC
Confidence 21 1332221 1 2233333322211010010000000 00000 000 0000 0001
Q ss_pred HHHHHHHHHHhcCCCeEEEEcCeEEEEEeCCCCHHHHHHHHHHHhhhcC-CCcce--EEEEeCCchhHHHHHHccccccC
Q 003025 725 KELLDHLESVLANEPAAVKSGQFIVEVKPQGVSKGVVAEKIFTTMAESG-RHADF--VLCIGDDRSDEDMFEIIGNATSS 801 (856)
Q Consensus 725 ~el~~~L~~~l~~~~~~v~~g~~~vEI~p~gvsKG~al~~Ll~~l~~~g-i~~d~--vlaiGD~~ND~~Mf~~ag~~~~~ 801 (856)
.+..+.+.+.+....+.+..+..++||.|++++||.|++++++++ | +++++ +++|||+.||++||+.+|.
T Consensus 157 ~~~~~~~~~~l~~~~~~~~~~~~~leI~~~~~~K~~~l~~l~~~~---~~~~~~~~~~~~~GD~~nD~~m~~~ag~---- 229 (275)
T 1xvi_A 157 DERMAQFTARLNELGLQFMQGARFWHVLDASAGKDQAANWIIATY---QQLSGKRPTTLGLGDGPNDAPLLEVMDY---- 229 (275)
T ss_dssp HHHHHHHHHHHHHTTEEEEECSSCEEEEETTCCHHHHHHHHHHHH---HHHHSSCCEEEEEESSGGGHHHHHTSSE----
T ss_pred HHHHHHHHHHHHhhCeEEEECCceEEEecCCCCHHHHHHHHHHHh---hhcccccCcEEEECCChhhHHHHHhCCc----
Confidence 122233333332224556667789999999999999999999999 8 88899 9999999999999999984
Q ss_pred CCCCCCccEEEEEeCCCc----c-----ccc-eEcC--ChhHHHHHHHHHHHh
Q 003025 802 GVLSSNASVFACTVGQKP----S-----KAK-YYLD--DAAEVVTMLEALAEA 842 (856)
Q Consensus 802 ~~~~~~~~~~av~vG~~~----s-----~A~-y~l~--~~~eV~~~L~~L~~~ 842 (856)
+|+||+.. . .|+ |+++ +.++|+++|+++...
T Consensus 230 ----------~va~~n~~~~~~~~~~~~~a~~~v~~~~~~dGVa~~l~~~l~~ 272 (275)
T 1xvi_A 230 ----------AVIVKGLNREGVHLHDEDPARVWRTQREGPEGWREGLDHFFSA 272 (275)
T ss_dssp ----------EEECCCCC-----------------------------------
T ss_pred ----------eEEecCCCccchhhccccCCceeEccCCCchHHHHHHHHHHHh
Confidence 57777642 2 267 7774 568899999998753
|
| >3vue_A GBSS-I, granule-bound starch synthase 1, chloroplastic/amyloplastic; rossmann fold, glycosyltransferase, transferase; 2.70A {Oryza sativa japonica group} PDB: 3vuf_A* | Back alignment and structure |
|---|
Probab=99.89 E-value=1.2e-22 Score=238.08 Aligned_cols=294 Identities=14% Similarity=0.131 Sum_probs=198.0
Q ss_pred CCEEEEeCcccchHHHHHHhhc------CCCeEEEEEccCCC-----ChHHH-hcCCch--------------------H
Q 003025 201 DDYVWIHDYHLMVLPTFLRRRF------TRLRMGFFLHSPFP-----SSEIY-RTLPVR--------------------E 248 (856)
Q Consensus 201 ~D~VwihDyhl~llp~~lr~~~------~~~~i~~flH~PfP-----~~e~~-~~lp~r--------------------~ 248 (856)
+|++++||+|-.++|.+++... .++++.|+.|..-. ....- ..+|.. .
T Consensus 154 ddIiH~hDW~t~l~~~~l~~~~~~~~~~~~~~~V~TiHnl~~qg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n 233 (536)
T 3vue_A 154 DVVFVCNDWHTGPLASYLKNNYQPNGIYRNAKVAFCIHNISYQGRFAFEDYPELNLSERFRSSFDFIDGYDTPVEGRKIN 233 (536)
T ss_dssp CEEEEEESGGGSTHHHHHHHHTTTTTSSTTCEEEEEESCTTCCCEEEGGGGGGGCCCGGGHHHHEEEETTTSTTCEEEEE
T ss_pred CEEEEECcchHHHHHHHHHHhhhhhhhhcccceeeeecCcccccccchhhhhhcCCchhhcchhhhhhcccccccccchh
Confidence 4789999999999999998765 36899999996521 11110 011110 1
Q ss_pred HHHHHhHhCCEEcccCHHHHHHHHHHHHhhhCceecccCceeeEEECCEEEEEEEeecccCchHHHHHhcC--------c
Q 003025 249 EILKALLNADLIGFHTFDYARHFLSCCSRMLGLEYQSKRGYIGLEYYGRTVGIKIMPVGIHMGQIESVLRL--------A 320 (856)
Q Consensus 249 eil~~ll~~dligf~t~~~~~~Fl~~~~r~lg~~~~~~~~~~~~~~~gr~~~i~i~p~GId~~~~~~~~~~--------~ 320 (856)
-+-.++..||.|---++.|++..++... .|.. +....+..+|.++|+|||.+.|.+.... .
T Consensus 234 ~~k~~i~~ad~v~tVS~~~a~ei~~~~~--~g~~---------l~~~~~~~~i~~I~NGiD~~~~~p~~d~~~~~~~~~~ 302 (536)
T 3vue_A 234 WMKAGILEADRVLTVSPYYAEELISGIA--RGCE---------LDNIMRLTGITGIVNGMDVSEWDPSKDKYITAKYDAT 302 (536)
T ss_dssp HHHHHHHHCSEEEESCHHHHHHHHTTCC--CCSS---------SCCCSCCCSCEECCCCCCTTTSCTTTCSSSSCCCCTT
T ss_pred HHHHHHHhccEEEEcCHHHhhhhhcccc--cccc---------cccccccCCeEEEECCcchhhcCCCCccccccccchh
Confidence 2445788899998888888877654110 0110 1112244467889999999988653210 0
Q ss_pred ----hHHHHHHHHHHHc-----CCCeEEEeccCccccCCHHHHHHHHHHHHHhCCCCcCceEEEEEecCCCCCchhHHHH
Q 003025 321 ----DKDWRVQELKQQF-----EGKTVLLGVDDMDIFKGVDLKLLAMEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEI 391 (856)
Q Consensus 321 ----~~~~~~~~l~~~~-----~~k~iil~VdRld~~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~l 391 (856)
........+++++ ++.++|++|||+++.||+..+++|+.+++++++ .|+.+|.+ +. +.
T Consensus 303 ~~~~~K~~~k~~l~~~~gl~~d~~~p~i~~vgRl~~~Kg~~~li~a~~~l~~~~~------~l~l~G~G---~~----~~ 369 (536)
T 3vue_A 303 TAIEAKALNKEALQAEAGLPVDRKIPLIAFIGRLEEQKGPDVMAAAIPELMQEDV------QIVLLGTG---KK----KF 369 (536)
T ss_dssp THHHHHHHHHHHHHHHTTSCCCTTSCEEEEECCBSGGGCHHHHHHHHHHHTTSSC------EEEEECCB---CH----HH
T ss_pred hhhhhhHHHHHHHHHhcCCCCCCCCcEEEEEeeccccCChHHHHHHHHHhHhhCC------eEEEEecc---Cc----hH
Confidence 0112233445554 467899999999999999999999999976543 25555532 22 22
Q ss_pred HHHHHHHHHHHhcccCCCCcccEEEEcCCCCHHHHHHHHHhcceeeeccccccCCCcccceeeeecCCCCCCCCCCCCCC
Q 003025 392 QAEIHATCKRINETFGRPGYEPVVFIDKPVTLSERAAYYTIAECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAP 471 (856)
Q Consensus 392 ~~~~~~lv~~IN~~~~~~~~~pvv~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~ 471 (856)
...++.+....+. .+.+.+..+.+++..+|+.||+||+||.+||||++++|||+|+
T Consensus 370 ~~~~~~~~~~~~~---------~v~~~~~~~~~~~~~~~~~aD~~v~PS~~E~fgl~~lEAma~G--------------- 425 (536)
T 3vue_A 370 EKLLKSMEEKYPG---------KVRAVVKFNAPLAHLIMAGADVLAVPSRFEPCGLIQLQGMRYG--------------- 425 (536)
T ss_dssp HHHHHHHHHHSTT---------TEEEECSCCHHHHHHHHHHCSEEEECCSCCSSCSHHHHHHHTT---------------
T ss_pred HHHHHHHHhhcCC---------ceEEEEeccHHHHHHHHHhhheeecccccCCCCHHHHHHHHcC---------------
Confidence 3334444444322 2234556789999999999999999999999999999999994
Q ss_pred CCceEEecCCcccccccCC---c----------eeeCCCCHHHHHHHHHHHHcCC-HHHHHHHHHHHhhhhhcCCHHHHH
Q 003025 472 KKSMLVVSEFIGCSPSLSG---A----------IRVNPWNIEATAEAMHEAIQMN-EAEKQLRHEKHYRYVSTHDVAYWA 537 (856)
Q Consensus 472 ~~g~lV~Se~~G~~~~l~~---a----------l~VnP~d~~~~A~ai~~aL~m~-~~er~~r~~~~~~~v~~~~~~~W~ 537 (856)
.|+|+|+.+|+.+.+.+ | ++|+|.|++++|+||.++|..- .++.+++.++. .-+.++|.+-|
T Consensus 426 --~PvI~s~~gG~~e~V~dg~~G~~~~~~~~~g~l~~~~d~~~la~ai~ral~~~~~~~~~~~~~~a--m~~~fSW~~~A 501 (536)
T 3vue_A 426 --TPCACASTGGLVDTVIEGKTGFHMGRLSVDCKVVEPSDVKKVAATLKRAIKVVGTPAYEEMVRNC--MNQDLSWKGPA 501 (536)
T ss_dssp --CCEEECSCTHHHHHCCBTTTEEECCCCCSCTTCCCHHHHHHHHHHHHHHHHHTTSHHHHHHHHHH--HHSCCSSHHHH
T ss_pred --CCEEEcCCCCchheeeCCCCccccccCCCceeEECCCCHHHHHHHHHHHHHhcCcHHHHHHHHHH--HHhcCCHHHHH
Confidence 49999999999998832 3 4889999999999999998622 22222222221 12457888888
Q ss_pred HHHHHHHHH
Q 003025 538 RSFFQDMER 546 (856)
Q Consensus 538 ~~~l~~l~~ 546 (856)
+++.+-..+
T Consensus 502 ~~y~~ly~~ 510 (536)
T 3vue_A 502 KNWENVLLG 510 (536)
T ss_dssp HHHHHHHHT
T ss_pred HHHHHHHHH
Confidence 887665544
|
| >3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A* | Back alignment and structure |
|---|
Probab=99.89 E-value=1.1e-22 Score=231.63 Aligned_cols=293 Identities=16% Similarity=0.180 Sum_probs=209.3
Q ss_pred CEEEEeCcccchHHHHHHhhcCCCeEEEEEccCCCChHHHhc-C----C-chHHH-HHHhHhCCEEcccCHHHHHHHHHH
Q 003025 202 DYVWIHDYHLMVLPTFLRRRFTRLRMGFFLHSPFPSSEIYRT-L----P-VREEI-LKALLNADLIGFHTFDYARHFLSC 274 (856)
Q Consensus 202 D~VwihDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~~~~-l----p-~r~ei-l~~ll~~dligf~t~~~~~~Fl~~ 274 (856)
|+|++|++...+++.++.+. .++|+.+.+|..++....+.. . + .+..+ ...+-.+|.|.+.+....+.+.+
T Consensus 124 Div~~~~~~~~~~~~~~~~~-~~~p~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~s~~~~~~~~~- 201 (438)
T 3c48_A 124 DLIHSHYWLSGQVGWLLRDL-WRIPLIHTAHTLAAVKNSYRDDSDTPESEARRICEQQLVDNADVLAVNTQEEMQDLMH- 201 (438)
T ss_dssp SEEEEEHHHHHHHHHHHHHH-HTCCEEEECSSCHHHHSCC----CCHHHHHHHHHHHHHHHHCSEEEESSHHHHHHHHH-
T ss_pred CEEEeCCccHHHHHHHHHHH-cCCCEEEEecCCcccccccccccCCcchHHHHHHHHHHHhcCCEEEEcCHHHHHHHHH-
Confidence 99999987665555555544 378999999987542210000 0 0 01111 12344689999988766666553
Q ss_pred HHhhhCceecccCceeeEEECCEEEEEEEeecccCchHHHHHhcCchHHHHHHHHHHHc---CCCeEEEeccCccccCCH
Q 003025 275 CSRMLGLEYQSKRGYIGLEYYGRTVGIKIMPVGIHMGQIESVLRLADKDWRVQELKQQF---EGKTVLLGVDDMDIFKGV 351 (856)
Q Consensus 275 ~~r~lg~~~~~~~~~~~~~~~gr~~~i~i~p~GId~~~~~~~~~~~~~~~~~~~l~~~~---~~k~iil~VdRld~~KGi 351 (856)
.+|+. ..++.++|+|||...|.+. .......+++++ .++++|+++||+.+.||+
T Consensus 202 ---~~g~~---------------~~k~~vi~ngvd~~~~~~~-----~~~~~~~~r~~~~~~~~~~~i~~~G~~~~~Kg~ 258 (438)
T 3c48_A 202 ---HYDAD---------------PDRISVVSPGADVELYSPG-----NDRATERSRRELGIPLHTKVVAFVGRLQPFKGP 258 (438)
T ss_dssp ---HHCCC---------------GGGEEECCCCCCTTTSCCC---------CHHHHHHTTCCSSSEEEEEESCBSGGGCH
T ss_pred ---HhCCC---------------hhheEEecCCccccccCCc-----ccchhhhhHHhcCCCCCCcEEEEEeeecccCCH
Confidence 12321 1135678999998876421 111122355555 468899999999999999
Q ss_pred HHHHHHHHHHHHhCCCCcCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCcccEEEEcCCCCHHHHHHHHH
Q 003025 352 DLKLLAMEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDKPVTLSERAAYYT 431 (856)
Q Consensus 352 ~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~~~~lv~~IN~~~~~~~~~pvv~~~~~v~~~el~aly~ 431 (856)
..+++|++.+.+++|+. ++.|+++|.+. ..++. .+++++++++.+ ..+.+.+.+.++.+++..+|+
T Consensus 259 ~~li~a~~~l~~~~p~~--~~~l~i~G~~~-~~g~~----~~~l~~~~~~~~-------l~~~v~~~g~~~~~~~~~~~~ 324 (438)
T 3c48_A 259 QVLIKAVAALFDRDPDR--NLRVIICGGPS-GPNAT----PDTYRHMAEELG-------VEKRIRFLDPRPPSELVAVYR 324 (438)
T ss_dssp HHHHHHHHHHHHHCTTC--SEEEEEECCBC-----------CHHHHHHHHTT-------CTTTEEEECCCCHHHHHHHHH
T ss_pred HHHHHHHHHHHhhCCCc--ceEEEEEeCCC-CCCcH----HHHHHHHHHHcC-------CCCcEEEcCCCChHHHHHHHH
Confidence 99999999999998842 35688888532 11333 344455555432 233455778999999999999
Q ss_pred hcceeeeccccccCCCcccceeeeecCCCCCCCCCCCCCCCCceEEecCCcccccccC---CceeeCCCCHHHHHHHHHH
Q 003025 432 IAECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIGCSPSLS---GAIRVNPWNIEATAEAMHE 508 (856)
Q Consensus 432 ~ADv~vvtS~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~al~VnP~d~~~~A~ai~~ 508 (856)
.||++|+||..||||++++|||+|+. |+|+|+.+|..+.+. .|++++|.|++++|++|.+
T Consensus 325 ~adv~v~ps~~e~~~~~~~Eama~G~-----------------PvI~~~~~~~~e~i~~~~~g~~~~~~d~~~la~~i~~ 387 (438)
T 3c48_A 325 AADIVAVPSFNESFGLVAMEAQASGT-----------------PVIAARVGGLPIAVAEGETGLLVDGHSPHAWADALAT 387 (438)
T ss_dssp HCSEEEECCSCCSSCHHHHHHHHTTC-----------------CEEEESCTTHHHHSCBTTTEEEESSCCHHHHHHHHHH
T ss_pred hCCEEEECccccCCchHHHHHHHcCC-----------------CEEecCCCChhHHhhCCCcEEECCCCCHHHHHHHHHH
Confidence 99999999999999999999999954 999999999998883 3899999999999999999
Q ss_pred HHcCCHHHHHHHHHHHhhhhhcCCHHHHHHHHHHHHHHHHHhh
Q 003025 509 AIQMNEAEKQLRHEKHYRYVSTHDVAYWARSFFQDMERTCKDH 551 (856)
Q Consensus 509 aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~l~~~~~~~ 551 (856)
+++ +++.+....++.++++.++++..+++++++.++++....
T Consensus 388 l~~-~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~ 429 (438)
T 3c48_A 388 LLD-DDETRIRMGEDAVEHARTFSWAATAAQLSSLYNDAIANE 429 (438)
T ss_dssp HHH-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred HHc-CHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhhhc
Confidence 998 455566666777888888999999999999888876653
|
| >3f9r_A Phosphomannomutase; trypanosome glycobiology structural genomics, isomerase, structural genomics consortium, SGC; 1.85A {Trypanosoma brucei} SCOP: c.108.1.0 PDB: 2i54_A* 2i55_A* | Back alignment and structure |
|---|
Probab=99.89 E-value=4.9e-23 Score=217.47 Aligned_cols=217 Identities=17% Similarity=0.158 Sum_probs=149.3
Q ss_pred CcEEEEEecCCCCCCCCCCCCCCCHHHHHHHHHHHhhCCCeEEEecCCChhhHHHhhcCC---CCccEEeeCCEEEEeCC
Q 003025 590 KSRAILFDYDGTVMPQTSINKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSPC---KKLGIAAEHGYFMRWSA 666 (856)
Q Consensus 590 ~~rlI~~DlDGTLl~~~~~~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~~---~~lgliaenG~~I~~~~ 666 (856)
++|+|++|+||||++ +++.++++++++|++| +++|+.|+|+|||++..+.+.++.- ...+++++||++|...+
T Consensus 3 ~~kli~~DlDGTLl~---~~~~i~~~~~~~l~~l-~~~g~~~~iaTGR~~~~~~~~l~~~~~~~~~~~i~~NGa~i~~~~ 78 (246)
T 3f9r_A 3 KRVLLLFDVDGTLTP---PRLCQTDEMRALIKRA-RGAGFCVGTVGGSDFAKQVEQLGRDVLTQFDYVFAENGLLAYRNG 78 (246)
T ss_dssp CSEEEEECSBTTTBS---TTSCCCHHHHHHHHHH-HHTTCEEEEECSSCHHHHHHHHCTTHHHHCSEEEEGGGTEEEETT
T ss_pred CceEEEEeCcCCcCC---CCCccCHHHHHHHHHH-HHCCCEEEEECCCCHHHHHHHhhhhccccCCEEEECCCcEEEECC
Confidence 589999999999999 8889999999999997 7789999999999999998888520 12468999999999876
Q ss_pred CcceEecCC-CCcccHHHHHHHHHHHHh-----hcCCcceEEecccceEEee--ecCCC----CCCch-----hHHHHHH
Q 003025 667 DEEWQNCGQ-SVDFGWIQIAEPVMKLYT-----ESTDGSYIEIKESALVWHH--RDADP----GFGSS-----QAKELLD 729 (856)
Q Consensus 667 ~~~w~~~~~-~~~~~w~~~v~~i~~~~~-----~~~~Gs~ie~k~~~l~~~~--~~~dp----~~~~~-----~a~el~~ 729 (856)
...|...++ ..+.+....+.+.++.+. ....+.+++.+...+.+.. ..... ++... ...++.+
T Consensus 79 ~~i~~~~i~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (246)
T 3f9r_A 79 LEIHRQSLLNALGNDRIVKFVKKTLRLIADLDIPVQRGTFVEYRNGMINVSPIGRNCSQAERDEFEVYDNEHRVRASLIA 158 (246)
T ss_dssp EEEEECCHHHHTCHHHHHHHHHHHHHHHHTCCCSCCCSCCEEECSSCEEECSSCTTSCHHHHHHHHHHHHHHCHHHHHHH
T ss_pred EEEEEeeccccCCHHHHHHHHHHHHhhhhceeeecCCceEEEeecceeccccccccCchhhceeeeEecccchHHHHHHH
Confidence 555654321 011222222222222221 1234667776654443311 11100 00000 0234455
Q ss_pred HHHHHhcCCC-eEEEEcCeEEEEEeCCCCHHHHHHHHHHHhhhcCCCcceEEEEeCC----chhHHHHHHccccccCCCC
Q 003025 730 HLESVLANEP-AAVKSGQFIVEVKPQGVSKGVVAEKIFTTMAESGRHADFVLCIGDD----RSDEDMFEIIGNATSSGVL 804 (856)
Q Consensus 730 ~L~~~l~~~~-~~v~~g~~~vEI~p~gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD~----~ND~~Mf~~ag~~~~~~~~ 804 (856)
.+.+.+.+.. ..+.+++.++||+|+|+|||.|+++|++ ++++++||||+ .||++||+.+|.
T Consensus 159 ~l~~~~~~~~~~~~~sg~~~leI~~~gv~Kg~al~~L~~-------~~~ev~afGD~~~~g~NDi~Ml~~a~~------- 224 (246)
T 3f9r_A 159 ELENSFPDFGLKYSIGGQISFDVFPVGWDKTYCLQFVED-------DFEEIHFFGDKTQEGGNDYEIYTDKRT------- 224 (246)
T ss_dssp HHHHHCGGGCEEEEEETTTEEEEEETTCSGGGGGGGTTT-------TCSEEEEEESCCSTTSTTHHHHTCTTS-------
T ss_pred HHHhhCcCCcEEEEecCCeEEEEEeCCCCHHHHHHHHHc-------CcccEEEEeCCCCCCCCCHHHHhCCCc-------
Confidence 5655555542 4578899999999999999999999976 68999999995 999999998763
Q ss_pred CCCccEEEEEeCCCccccceEcCChhHHHHHHHHHHH
Q 003025 805 SSNASVFACTVGQKPSKAKYYLDDAAEVVTMLEALAE 841 (856)
Q Consensus 805 ~~~~~~~av~vG~~~s~A~y~l~~~~eV~~~L~~L~~ 841 (856)
.+++| .++.++++.|+.|+.
T Consensus 225 ------~g~~v-----------~n~~~~~~~~~~~~~ 244 (246)
T 3f9r_A 225 ------IGHKV-----------TSYKDTIAEVEKIIA 244 (246)
T ss_dssp ------EEEEC-----------SSHHHHHHHHHHHHH
T ss_pred ------cEEEe-----------CCHHHHHHHHHHHhc
Confidence 24554 467788888887763
|
| >1nrw_A Hypothetical protein, haloacid dehalogenase-like hydrolase; structural genomics, PSI, protein structure initiative; 1.70A {Bacillus subtilis} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=99.89 E-value=7.7e-22 Score=212.96 Aligned_cols=223 Identities=17% Similarity=0.157 Sum_probs=149.9
Q ss_pred CcEEEEEecCCCCCCCCCCCCCCCHHHHHHHHHHHhhCCCeEEEecCCChhhHHHhhcCCC-CccEEeeCCEEEEeC-CC
Q 003025 590 KSRAILFDYDGTVMPQTSINKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSPCK-KLGIAAEHGYFMRWS-AD 667 (856)
Q Consensus 590 ~~rlI~~DlDGTLl~~~~~~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~~~-~lgliaenG~~I~~~-~~ 667 (856)
|+|+|+||+||||++ +++.+++.++++|++| ++.|+.|+++|||+...+..++..+. ...++++||+.+... +.
T Consensus 3 mikli~~DlDGTLl~---~~~~i~~~~~~al~~l-~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~i~~~~~~ 78 (288)
T 1nrw_A 3 AMKLIAIDLDGTLLN---SKHQVSLENENALRQA-QRDGIEVVVSTGRAHFDVMSIFEPLGIKTWVISANGAVIHDPEGR 78 (288)
T ss_dssp -CCEEEEECCCCCSC---TTSCCCHHHHHHHHHH-HHTTCEEEEECSSCHHHHHHHHGGGTCCCEEEEGGGTEEECTTCC
T ss_pred ceEEEEEeCCCCCCC---CCCccCHHHHHHHHHH-HHCCCEEEEEeCCCHHHHHHHHHHcCCCCcEEEcCCeEEEcCCCc
Confidence 579999999999999 7889999999999997 78899999999999999999887653 335899999999873 33
Q ss_pred cceEecCCCCcccHHHHHHHHHHHHhhc--------CCcceEEecc------c---c----------------------e
Q 003025 668 EEWQNCGQSVDFGWIQIAEPVMKLYTES--------TDGSYIEIKE------S---A----------------------L 708 (856)
Q Consensus 668 ~~w~~~~~~~~~~w~~~v~~i~~~~~~~--------~~Gs~ie~k~------~---~----------------------l 708 (856)
..+....+ .+.+.++++...+. ..+.+.+... . . .
T Consensus 79 ~~~~~~~~------~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (288)
T 1nrw_A 79 LYHHETID------KKRAYDILSWLESENYYYEVFTGSAIYTPQNGRELLDVELDRFRSANPEADLSVLKQAAEVQYSQS 152 (288)
T ss_dssp EEEECCCC------HHHHHHHHHHHHHTTCEEEEEESSCEEECCCHHHHHHHHHHHHHHHCTTSCHHHHHHHHHHHHHTC
T ss_pred EEEEeeCC------HHHHHHHHHHHHHCCcEEEEEeCCEEEEcCchHHHHHHHHHHHhhcccccchHHHHhhhhhhhhcC
Confidence 23332221 13344444433221 0111211100 0 0 0
Q ss_pred EEee----ecCC---C--CCC----chhHHHHHHHHHHHhcC--CCeEEEEcCeEEEEEeCCCCHHHHHHHHHHHhhhcC
Q 003025 709 VWHH----RDAD---P--GFG----SSQAKELLDHLESVLAN--EPAAVKSGQFIVEVKPQGVSKGVVAEKIFTTMAESG 773 (856)
Q Consensus 709 ~~~~----~~~d---p--~~~----~~~a~el~~~L~~~l~~--~~~~v~~g~~~vEI~p~gvsKG~al~~Ll~~l~~~g 773 (856)
.+.+ .... + ... .....+..+.+.+.+.. ....+.++..++||.|++++||.+++.+++++ |
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~ki~~~~~~~~~~~~~~~~l~~~~~~~~~~s~~~~lei~~~~~~K~~~~~~~~~~~---~ 229 (288)
T 1nrw_A 153 GFAYINSFQELFEADEPIDFYNILGFSFFKEKLEAGWKRYEHAEDLTLVSSAEHNFELSSRKASKGQALKRLAKQL---N 229 (288)
T ss_dssp CEEECSCGGGGTSSSSCCCEEEEEEECSCHHHHHHHHHHHTTCTTEEEECSSTTEEEEEETTCSHHHHHHHHHHHT---T
T ss_pred CceEcCCHHHhhccccCCCceEEEEEcCCHHHHHHHHHHHhhCCCEEEEeeCCCcEEEecCCCChHHHHHHHHHHh---C
Confidence 0111 0000 0 000 00011222333333322 12344567889999999999999999999999 9
Q ss_pred CCcceEEEEeCCchhHHHHHHccccccCCCCCCCccEEEEEeCCC----ccccceEcCC--hhHHHHHHHHH
Q 003025 774 RHADFVLCIGDDRSDEDMFEIIGNATSSGVLSSNASVFACTVGQK----PSKAKYYLDD--AAEVVTMLEAL 839 (856)
Q Consensus 774 i~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~----~s~A~y~l~~--~~eV~~~L~~L 839 (856)
++++++++|||+.||++|++.+|. +|+||+. +..|+|++.+ .++|+++|+++
T Consensus 230 ~~~~~~~~~GD~~nD~~m~~~ag~--------------~va~~~~~~~~~~~a~~v~~~~~~dGVa~~i~~~ 287 (288)
T 1nrw_A 230 IPLEETAAVGDSLNDKSMLEAAGK--------------GVAMGNAREDIKSIADAVTLTNDEHGVAHMMKHL 287 (288)
T ss_dssp CCGGGEEEEESSGGGHHHHHHSSE--------------EEECTTCCHHHHHHCSEECCCGGGTHHHHHHHHT
T ss_pred CCHHHEEEEcCCHHHHHHHHHcCc--------------EEEEcCCCHHHHhhCceeecCCCcChHHHHHHHh
Confidence 999999999999999999999984 5778875 3568898864 58899999875
|
| >2amy_A PMM 2, phosphomannomutase 2; HS.459855, HS.313504, BC008310, phosphatase, PFAM PF03332, H superfamily, jaecken disease; 2.09A {Homo sapiens} SCOP: c.108.1.10 PDB: 2q4r_A | Back alignment and structure |
|---|
Probab=99.89 E-value=4.6e-23 Score=217.32 Aligned_cols=203 Identities=17% Similarity=0.217 Sum_probs=132.5
Q ss_pred CCcEEEEEecCCCCCCCCCCCCCCCHHHHHHHHHHHhhCCCeEEEecCCChhhHHHhhcC-C--CCccEEeeCCEEEEeC
Q 003025 589 SKSRAILFDYDGTVMPQTSINKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSP-C--KKLGIAAEHGYFMRWS 665 (856)
Q Consensus 589 s~~rlI~~DlDGTLl~~~~~~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~-~--~~lgliaenG~~I~~~ 665 (856)
.++|+|++|+||||++ +++.++++++++|++| +++ +.|+|||||+...+.+.++. + ...+++++||+.|...
T Consensus 4 ~~~kli~~DlDGTLl~---~~~~i~~~~~~al~~l-~~~-i~v~iaTGR~~~~~~~~l~~~~~~~~~~~I~~NGa~i~~~ 78 (246)
T 2amy_A 4 PGPALCLFDVDGTLTA---PRQKITKEMDDFLQKL-RQK-IKIGVVGGSDFEKVQEQLGNDVVEKYDYVFPENGLVAYKD 78 (246)
T ss_dssp CCSEEEEEESBTTTBC---TTSCCCHHHHHHHHHH-TTT-SEEEEECSSCHHHHHHHHCTTHHHHCSEEESGGGTEEEET
T ss_pred CCceEEEEECCCCcCC---CCcccCHHHHHHHHHH-HhC-CeEEEEcCCCHHHHHHHhccccccccCEEEECCCcEEEeC
Confidence 4589999999999999 7888999999999997 777 99999999999988887742 1 1135899999999885
Q ss_pred CCcceEecCCC-CcccHHHHHHHHHHHHh--------hcCCcceEEecccceEEe-e-ecCCC----CCCc-----hhHH
Q 003025 666 ADEEWQNCGQS-VDFGWIQIAEPVMKLYT--------ESTDGSYIEIKESALVWH-H-RDADP----GFGS-----SQAK 725 (856)
Q Consensus 666 ~~~~w~~~~~~-~~~~w~~~v~~i~~~~~--------~~~~Gs~ie~k~~~l~~~-~-~~~dp----~~~~-----~~a~ 725 (856)
+...|...++. .+ .+.+.++++.+. ...++.+.+.+.....+. + +.... .+.. ....
T Consensus 79 ~~~i~~~~l~~~l~---~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (246)
T 2amy_A 79 GKLLCRQNIQSHLG---EALIQDLINYCLSYIAKIKLPKKRGTFIEFRNGMLNVSPIGRSCSQEERIEFYELDKKENIRQ 155 (246)
T ss_dssp TEEEEECCHHHHHC---HHHHHHHHHHHHHHHHHCCCSCCCSCSEEEETTEEEECSSCTTCCHHHHHHHHHHHHHHCHHH
T ss_pred CcEEEeeecccccC---HHHHHHHHHHHHhcCceEEEecCCceeEecccceeehhhhcCcCchhhhhhheeecCCHHHHH
Confidence 54445432100 01 122333332221 112344544332211111 0 00000 0000 0112
Q ss_pred HHHHHHHHHhcCCCeEE-EEcCeEEEEEeCCCCHHHHHHHHHHHhhhcCCCcceEEEEeC----CchhHHHHHHcccccc
Q 003025 726 ELLDHLESVLANEPAAV-KSGQFIVEVKPQGVSKGVVAEKIFTTMAESGRHADFVLCIGD----DRSDEDMFEIIGNATS 800 (856)
Q Consensus 726 el~~~L~~~l~~~~~~v-~~g~~~vEI~p~gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD----~~ND~~Mf~~ag~~~~ 800 (856)
++.+.+.+.+....+.+ .++..++||.|+++|||.|+++| + |+++++++|||| +.||++||+.+|.
T Consensus 156 ~~~~~l~~~~~~~~~~~~~s~~~~leI~~~~~~Kg~al~~l---~---~i~~~~viafGD~~~~~~ND~~Ml~~a~~--- 226 (246)
T 2amy_A 156 KFVADLRKEFAGKGLTFSIGGQISFDVFPDGWDKRYCLRHV---E---NDGYKTIYFFGDKTMPGGNDHEIFTDPRT--- 226 (246)
T ss_dssp HHHHHHHHHTTTSCEEEEEETTTEEEEEETTCSGGGGGGGT---T---TSCCSEEEEEECSCC---CCCHHHHCTTE---
T ss_pred HHHHHHHHhcCCCcEEEEEcCCcEEEEecCCCchHHHHHHH---h---CCCHHHEEEECCCCCCCCCcHHHHHhCCc---
Confidence 33444544444323444 45788999999999999999999 6 999999999999 9999999999875
Q ss_pred CCCCCCCccEEEEEeCCC
Q 003025 801 SGVLSSNASVFACTVGQK 818 (856)
Q Consensus 801 ~~~~~~~~~~~av~vG~~ 818 (856)
.+++|||+
T Consensus 227 ----------ag~av~Na 234 (246)
T 2amy_A 227 ----------MGYSVTAP 234 (246)
T ss_dssp ----------EEEECSSH
T ss_pred ----------ceEEeeCC
Confidence 37888886
|
| >3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A* | Back alignment and structure |
|---|
Probab=99.89 E-value=5.5e-22 Score=221.65 Aligned_cols=288 Identities=13% Similarity=0.158 Sum_probs=210.0
Q ss_pred HHHHcCCCCCEEEEeCcccchHHHHHHhhcCCCeEEEEEccCCCChHHHhcCCchHHHH-HHhHhCCEEcccCHHHHHHH
Q 003025 193 VIEVINPEDDYVWIHDYHLMVLPTFLRRRFTRLRMGFFLHSPFPSSEIYRTLPVREEIL-KALLNADLIGFHTFDYARHF 271 (856)
Q Consensus 193 i~~~~~~~~D~VwihDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~~~~lp~r~eil-~~ll~~dligf~t~~~~~~F 271 (856)
+++..+| |+||+|+...+.+...+.++....++.+.+|...+ .+...+....++ ..+-.+|.|-+.+....+.+
T Consensus 81 ~~~~~~~--Dvv~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~---~~~~~~~~~~~~~~~~~~~d~ii~~s~~~~~~~ 155 (394)
T 3okp_A 81 IIREREI--DNVWFGAAAPLALMAGTAKQAGASKVIASTHGHEV---GWSMLPGSRQSLRKIGTEVDVLTYISQYTLRRF 155 (394)
T ss_dssp HHHHTTC--SEEEESSCTTGGGGHHHHHHTTCSEEEEECCSTHH---HHTTSHHHHHHHHHHHHHCSEEEESCHHHHHHH
T ss_pred HHHhcCC--CEEEECCcchHHHHHHHHHhcCCCcEEEEeccchh---hhhhcchhhHHHHHHHHhCCEEEEcCHHHHHHH
Confidence 3455566 99999987766544444444433368889995422 222223333333 33456899999887666665
Q ss_pred HHHHHhhhCceecccCceeeEEECCEEEEEEEeecccCchHHHHHhcCchHHHHHHHHHHHc---CCCeEEEeccCcccc
Q 003025 272 LSCCSRMLGLEYQSKRGYIGLEYYGRTVGIKIMPVGIHMGQIESVLRLADKDWRVQELKQQF---EGKTVLLGVDDMDIF 348 (856)
Q Consensus 272 l~~~~r~lg~~~~~~~~~~~~~~~gr~~~i~i~p~GId~~~~~~~~~~~~~~~~~~~l~~~~---~~k~iil~VdRld~~ 348 (856)
.+. .+. ..++.++|+|||...|.+. .......+++++ +++++|+++||+++.
T Consensus 156 ~~~----~~~----------------~~~~~vi~ngv~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~i~~~G~~~~~ 210 (394)
T 3okp_A 156 KSA----FGS----------------HPTFEHLPSGVDVKRFTPA-----TPEDKSATRKKLGFTDTTPVIACNSRLVPR 210 (394)
T ss_dssp HHH----HCS----------------SSEEEECCCCBCTTTSCCC-----CHHHHHHHHHHTTCCTTCCEEEEESCSCGG
T ss_pred HHh----cCC----------------CCCeEEecCCcCHHHcCCC-----CchhhHHHHHhcCCCcCceEEEEEeccccc
Confidence 542 111 1256789999998876421 122335566666 355899999999999
Q ss_pred CCHHHHHHHHHHHHHhCCCCcCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCcccEEEEcCCCCHHHHHH
Q 003025 349 KGVDLKLLAMEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDKPVTLSERAA 428 (856)
Q Consensus 349 KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~~~~lv~~IN~~~~~~~~~pvv~~~~~v~~~el~a 428 (856)
||+..+++|++++.+++|+++ |+.+|. ++..+.++ +++. +..+.+.+.|.++.+++..
T Consensus 211 Kg~~~li~a~~~l~~~~~~~~----l~i~G~-----g~~~~~l~----~~~~---------~~~~~v~~~g~~~~~~~~~ 268 (394)
T 3okp_A 211 KGQDSLIKAMPQVIAARPDAQ----LLIVGS-----GRYESTLR----RLAT---------DVSQNVKFLGRLEYQDMIN 268 (394)
T ss_dssp GCHHHHHHHHHHHHHHSTTCE----EEEECC-----CTTHHHHH----HHTG---------GGGGGEEEEESCCHHHHHH
T ss_pred cCHHHHHHHHHHHHhhCCCeE----EEEEcC-----chHHHHHH----HHHh---------cccCeEEEcCCCCHHHHHH
Confidence 999999999999999998765 777763 34433333 3331 1223455677899999999
Q ss_pred HHHhcceeeecccc-------ccCCCcccceeeeecCCCCCCCCCCCCCCCCceEEecCCcccccccC--CceeeCCCCH
Q 003025 429 YYTIAECVVVTAVR-------DGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIGCSPSLS--GAIRVNPWNI 499 (856)
Q Consensus 429 ly~~ADv~vvtS~~-------EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~--~al~VnP~d~ 499 (856)
+|+.||++|+||.. ||||++++|||+|+. |+|+|+.+|..+.+. .|++++|.|+
T Consensus 269 ~~~~ad~~v~ps~~~~~~~~~e~~~~~~~Ea~a~G~-----------------PvI~~~~~~~~e~i~~~~g~~~~~~d~ 331 (394)
T 3okp_A 269 TLAAADIFAMPARTRGGGLDVEGLGIVYLEAQACGV-----------------PVIAGTSGGAPETVTPATGLVVEGSDV 331 (394)
T ss_dssp HHHHCSEEEECCCCBGGGTBCCSSCHHHHHHHHTTC-----------------CEEECSSTTGGGGCCTTTEEECCTTCH
T ss_pred HHHhCCEEEecCccccccccccccCcHHHHHHHcCC-----------------CEEEeCCCChHHHHhcCCceEeCCCCH
Confidence 99999999999999 999999999999954 999999999998884 4899999999
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHhhhhhc-CCHHHHHHHHHHHHHHHHHh
Q 003025 500 EATAEAMHEAIQMNEAEKQLRHEKHYRYVST-HDVAYWARSFFQDMERTCKD 550 (856)
Q Consensus 500 ~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~-~~~~~W~~~~l~~l~~~~~~ 550 (856)
+++|++|.++++ +++.++...++.++++.+ +++..+++++++-+++....
T Consensus 332 ~~l~~~i~~l~~-~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~r~ 382 (394)
T 3okp_A 332 DKLSELLIELLD-DPIRRAAMGAAGRAHVEAEWSWEIMGERLTNILQSEPRK 382 (394)
T ss_dssp HHHHHHHHHHHT-CHHHHHHHHHHHHHHHHHHTBHHHHHHHHHHHHHSCCC-
T ss_pred HHHHHHHHHHHh-CHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHhccC
Confidence 999999999998 556666666777887775 89999999999888765544
|
| >2r60_A Glycosyl transferase, group 1; rossmann-fold; 1.80A {Halothermothrix orenii} PDB: 2r66_A* 2r68_A* | Back alignment and structure |
|---|
Probab=99.89 E-value=1.1e-22 Score=236.08 Aligned_cols=306 Identities=15% Similarity=0.063 Sum_probs=212.7
Q ss_pred cCCCCCEEEEeCcccchHHHHHHhhcCCCeEEEEEccCCCChHH------------HhcCC--chHHH-HHHhHhCCEEc
Q 003025 197 INPEDDYVWIHDYHLMVLPTFLRRRFTRLRMGFFLHSPFPSSEI------------YRTLP--VREEI-LKALLNADLIG 261 (856)
Q Consensus 197 ~~~~~D~VwihDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~------------~~~lp--~r~ei-l~~ll~~dlig 261 (856)
.+| |+|++|.++..+++.++.+. .++|+.+.+|..++.... .+..- .+..+ ...+-.+|.|-
T Consensus 119 ~~~--Divh~~~~~~~~~~~~~~~~-~~~p~v~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi 195 (499)
T 2r60_A 119 KFP--QVVTTHYGDGGLAGVLLKNI-KGLPFTFTGHSLGAQKMEKLNVNTSNFKEMDERFKFHRRIIAERLTMSYADKII 195 (499)
T ss_dssp CCC--SEEEEEHHHHHHHHHHHHHH-HCCCEEEECSSCHHHHHHTTCCCSTTSHHHHHHHCHHHHHHHHHHHHHHCSEEE
T ss_pred CCC--CEEEEcCCcchHHHHHHHHh-cCCcEEEEccCcccccchhhccCCCCcchhhhhHHHHHHHHHHHHHHhcCCEEE
Confidence 355 99999998766666666554 368899999986542211 00000 01011 12344688888
Q ss_pred ccCHHHHHHHHHHHHhhhC-ceecccCceeeEEECCEEEEEEEeecccCchHHHHHhcCchHHHHHHHHHHHc-------
Q 003025 262 FHTFDYARHFLSCCSRMLG-LEYQSKRGYIGLEYYGRTVGIKIMPVGIHMGQIESVLRLADKDWRVQELKQQF------- 333 (856)
Q Consensus 262 f~t~~~~~~Fl~~~~r~lg-~~~~~~~~~~~~~~~gr~~~i~i~p~GId~~~~~~~~~~~~~~~~~~~l~~~~------- 333 (856)
+.+....+.+.+. ..+| +... ....++.++|+|||...|.+.. .......+++++
T Consensus 196 ~~S~~~~~~~~~~--~~~g~~~~~-----------~~~~ki~vi~ngvd~~~~~~~~----~~~~~~~~r~~~~~~~~~~ 258 (499)
T 2r60_A 196 VSTSQERFGQYSH--DLYRGAVNV-----------EDDDKFSVIPPGVNTRVFDGEY----GDKIKAKITKYLERDLGSE 258 (499)
T ss_dssp ESSHHHHHHTTTS--GGGTTTCCT-----------TCGGGEEECCCCBCTTTSSSCC----CHHHHHHHHHHHHHHSCGG
T ss_pred ECCHHHHHHHHhh--hcccccccc-----------cCCCCeEEECCCcChhhcCccc----hhhhHHHHHHHhccccccc
Confidence 8776555444320 0012 1000 0112467799999998775321 111223344443
Q ss_pred -CCCeEEEeccCccccCCHHHHHHHHHHHHHhCCCCcCceEEEEEecCCCCCc-------hhHHHHHHHHHHHHHHHhcc
Q 003025 334 -EGKTVLLGVDDMDIFKGVDLKLLAMEHLLKQHPKWQGRAVLVQIANPARGRG-------KDLEEIQAEIHATCKRINET 405 (856)
Q Consensus 334 -~~k~iil~VdRld~~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~-------~~~~~l~~~~~~lv~~IN~~ 405 (856)
.++++|+++||+++.||+..+++|+.++.+++|+. +.|+++|... +.. ....++.+++++++++.+
T Consensus 259 ~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~~~~---~~l~i~G~~~-~~~~~y~~l~~~~~~y~~~l~~~~~~~~-- 332 (499)
T 2r60_A 259 RMELPAIIASSRLDQKKNHYGLVEAYVQNKELQDKA---NLVLTLRGIE-NPFEDYSRAGQEEKEILGKIIELIDNND-- 332 (499)
T ss_dssp GTTSCEEEECSCCCGGGCHHHHHHHHHTCHHHHHHC---EEEEEESSCS-BTTTBCTTSCHHHHHHHHHHHHHHHHTT--
T ss_pred CCCCcEEEEeecCccccCHHHHHHHHHHHHHhCCCc---eEEEEECCCC-CcccccccccccchHHHHHHHHHHHhcC--
Confidence 36789999999999999999999999998876642 3466666421 110 112344667777777644
Q ss_pred cCCCCcccEEEEcCCCCHHHHHHHHHhc----ceeeeccccccCCCcccceeeeecCCCCCCCCCCCCCCCCceEEecCC
Q 003025 406 FGRPGYEPVVFIDKPVTLSERAAYYTIA----ECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEF 481 (856)
Q Consensus 406 ~~~~~~~pvv~~~~~v~~~el~aly~~A----Dv~vvtS~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~g~lV~Se~ 481 (856)
..+.+.+.|.++.+++.++|+.| |++|+||..||||++++|||+|+. |+|+|+.
T Consensus 333 -----l~~~V~~~G~v~~~~~~~~~~~a~~~~dv~v~pS~~Eg~~~~~lEAma~G~-----------------PvI~s~~ 390 (499)
T 2r60_A 333 -----CRGKVSMFPLNSQQELAGCYAYLASKGSVFALTSFYEPFGLAPVEAMASGL-----------------PAVVTRN 390 (499)
T ss_dssp -----CBTTEEEEECCSHHHHHHHHHHHHHTTCEEEECCSCBCCCSHHHHHHHTTC-----------------CEEEESS
T ss_pred -----CCceEEECCCCCHHHHHHHHHhcCcCCCEEEECcccCCCCcHHHHHHHcCC-----------------CEEEecC
Confidence 33345567889999999999999 999999999999999999999954 9999999
Q ss_pred cccccccC---CceeeCCCCHHHHHHHHHHHHcCCHHHHHHHHHHHhhhhhc-CCHHHHHHHHHHHHHHHHHhh
Q 003025 482 IGCSPSLS---GAIRVNPWNIEATAEAMHEAIQMNEAEKQLRHEKHYRYVST-HDVAYWARSFFQDMERTCKDH 551 (856)
Q Consensus 482 ~G~~~~l~---~al~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~-~~~~~W~~~~l~~l~~~~~~~ 551 (856)
+|..+.+. .|++|+|.|++++|++|.++++ +++.+....++.++++.+ +++..+++++++-++++....
T Consensus 391 ~g~~e~v~~~~~g~l~~~~d~~~la~~i~~ll~-~~~~~~~~~~~a~~~~~~~fs~~~~~~~~~~~y~~~~~~~ 463 (499)
T 2r60_A 391 GGPAEILDGGKYGVLVDPEDPEDIARGLLKAFE-SEETWSAYQEKGKQRVEERYTWQETARGYLEVIQEIADRK 463 (499)
T ss_dssp BHHHHHTGGGTSSEEECTTCHHHHHHHHHHHHS-CHHHHHHHHHHHHHHHHHHSBHHHHHHHHHHHHHHHHHC-
T ss_pred CCHHHHhcCCceEEEeCCCCHHHHHHHHHHHHh-CHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhhh
Confidence 99988883 3899999999999999999998 556666667777888877 999999999999998877654
|
| >1l6r_A Hypothetical protein TA0175; structural genomics, putative hydrolas midwest center for structural genomics, MCSG, PSI; 1.40A {Thermoplasma acidophilum} SCOP: c.108.1.10 PDB: 1kyt_A | Back alignment and structure |
|---|
Probab=99.89 E-value=1.9e-22 Score=210.38 Aligned_cols=211 Identities=14% Similarity=0.114 Sum_probs=148.3
Q ss_pred CcEEEEEecCCCCCCCCCCCCCCCHHHHHHHHHHHhhCCCeEEEecCCChhhHHHhhcCCC-CccEEeeCCEEEEeC-CC
Q 003025 590 KSRAILFDYDGTVMPQTSINKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSPCK-KLGIAAEHGYFMRWS-AD 667 (856)
Q Consensus 590 ~~rlI~~DlDGTLl~~~~~~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~~~-~lgliaenG~~I~~~-~~ 667 (856)
++|+|++|+||||++ .++.++++++++|++| +++|+.|+++|||+...+..++..+. ..+++++||+.+... +.
T Consensus 4 m~kli~~DlDGTLl~---~~~~i~~~~~~~l~~l-~~~g~~~~i~TGr~~~~~~~~~~~l~~~~~~I~~NGa~i~~~~~~ 79 (227)
T 1l6r_A 4 MIRLAAIDVDGNLTD---RDRLISTKAIESIRSA-EKKGLTVSLLSGNVIPVVYALKIFLGINGPVFGENGGIMFDNDGS 79 (227)
T ss_dssp CCCEEEEEHHHHSBC---TTSCBCHHHHHHHHHH-HHTTCEEEEECSSCHHHHHHHHHHHTCCSCEEEGGGTEEECTTSC
T ss_pred ceEEEEEECCCCCcC---CCCcCCHHHHHHHHHH-HHCCCEEEEECCCCcHHHHHHHHHhCCCCeEEEeCCcEEEeCCCC
Confidence 579999999999999 7888999999999997 78899999999999999998886653 235899999999863 22
Q ss_pred cc-eEecCCCCcccHHHHHHHHHHHHhhcCCcceEEecccceEEeeecCC--CCCCchhHHHHHHHHHHHhcCCCeEEEE
Q 003025 668 EE-WQNCGQSVDFGWIQIAEPVMKLYTESTDGSYIEIKESALVWHHRDAD--PGFGSSQAKELLDHLESVLANEPAAVKS 744 (856)
Q Consensus 668 ~~-w~~~~~~~~~~w~~~v~~i~~~~~~~~~Gs~ie~k~~~l~~~~~~~d--p~~~~~~a~el~~~L~~~l~~~~~~v~~ 744 (856)
.. |... . +.+.++ +.+.+. + ..+.. ...+++..+ ...... ..+..+.+.+.+ .+.+.+
T Consensus 80 ~i~~~~~-------l-~~~~~i-~~~~~~----~-~~~~~-~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~---~~~~~~ 140 (227)
T 1l6r_A 80 IKKFFSN-------E-GTNKFL-EEMSKR----T-SMRSI-LTNRWREASTGFDIDPE-DVDYVRKEAESR---GFVIFY 140 (227)
T ss_dssp EEESSCS-------H-HHHHHH-HHHTTT----S-SCBCC-GGGGGCSSSEEEBCCGG-GHHHHHHHHHTT---TEEEEE
T ss_pred EEEEecc-------H-HHHHHH-HHHHHH----h-cCCcc-ccccceecccceEEecC-CHHHHHHHHHhc---CEEEEe
Confidence 22 2211 1 334444 333221 1 00000 000000000 000001 122233333333 344448
Q ss_pred cCeEEEEEeCCCCHHHHHHHHHHHhhhcCCCcceEEEEeCCchhHHHHHHccccccCCCCCCCccEEEEEeCCC----cc
Q 003025 745 GQFIVEVKPQGVSKGVVAEKIFTTMAESGRHADFVLCIGDDRSDEDMFEIIGNATSSGVLSSNASVFACTVGQK----PS 820 (856)
Q Consensus 745 g~~~vEI~p~gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~----~s 820 (856)
+..++||.|++++||.+++++++++ |++++++++|||+.||++||+.+|. +|+||+. +.
T Consensus 141 ~~~~~ei~~~~~~K~~~l~~l~~~~---~~~~~~~~~iGD~~nD~~m~~~ag~--------------~va~~n~~~~~k~ 203 (227)
T 1l6r_A 141 SGYSWHLMNRGEDKAFAVNKLKEMY---SLEYDEILVIGDSNNDMPMFQLPVR--------------KACPANATDNIKA 203 (227)
T ss_dssp ETTEEEEEETTCSHHHHHHHHHHHT---TCCGGGEEEECCSGGGHHHHTSSSE--------------EEECTTSCHHHHH
T ss_pred cCcEEEEecCCCCHHHHHHHHHHHh---CcCHHHEEEECCcHHhHHHHHHcCc--------------eEEecCchHHHHH
Confidence 8999999999999999999999999 9999999999999999999999984 5778875 35
Q ss_pred ccceEcCC--hhHHHHHHHHHH
Q 003025 821 KAKYYLDD--AAEVVTMLEALA 840 (856)
Q Consensus 821 ~A~y~l~~--~~eV~~~L~~L~ 840 (856)
.|+|++.+ .++|+++|+++.
T Consensus 204 ~a~~v~~~~~~~Gv~~~l~~~~ 225 (227)
T 1l6r_A 204 VSDFVSDYSYGEEIGQIFKHFE 225 (227)
T ss_dssp HCSEECSCCTTHHHHHHHHHTT
T ss_pred hCCEEecCCCCcHHHHHHHHHh
Confidence 78898854 588999998864
|
| >1wr8_A Phosphoglycolate phosphatase; alpha / beta core domain, HAD superfamily, structural genomi structural genomics/proteomics initiative, RSGI; 1.60A {Pyrococcus horikoshii} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=99.88 E-value=6.2e-22 Score=206.73 Aligned_cols=214 Identities=19% Similarity=0.186 Sum_probs=152.1
Q ss_pred CcEEEEEecCCCCCCCCCCCCCCCHHHHHHHHHHHhhCCCeEEEecCCChhhHHHhhcCCC-CccEEeeCCEEEEeCCCc
Q 003025 590 KSRAILFDYDGTVMPQTSINKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSPCK-KLGIAAEHGYFMRWSADE 668 (856)
Q Consensus 590 ~~rlI~~DlDGTLl~~~~~~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~~~-~lgliaenG~~I~~~~~~ 668 (856)
|+|+|+||+||||++ +++.+++++.++|++| +++|+.|+++|||+...+.+++..+. ...++++||+.+...+..
T Consensus 2 m~kli~~DlDGTLl~---~~~~i~~~~~~al~~l-~~~G~~v~i~TGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~~~~ 77 (231)
T 1wr8_A 2 KIKAISIDIDGTITY---PNRMIHEKALEAIRRA-ESLGIPIMLVTGNTVQFAEAASILIGTSGPVVAEDGGAISYKKKR 77 (231)
T ss_dssp CCCEEEEESTTTTBC---TTSCBCHHHHHHHHHH-HHTTCCEEEECSSCHHHHHHHHHHHTCCSCEEEGGGTEEEETTEE
T ss_pred ceeEEEEECCCCCCC---CCCcCCHHHHHHHHHH-HHCCCEEEEEcCCChhHHHHHHHHcCCCCeEEEeCCcEEEeCCEE
Confidence 479999999999999 7889999999999997 78899999999999999888876543 335889999988774433
Q ss_pred ceEecCCCCcccHHHHHHHHHHHHhhcCCcceEEec-cc---ceEEeeecCCCCCCchhHHHHHHHHHHHhcCCCeEEEE
Q 003025 669 EWQNCGQSVDFGWIQIAEPVMKLYTESTDGSYIEIK-ES---ALVWHHRDADPGFGSSQAKELLDHLESVLANEPAAVKS 744 (856)
Q Consensus 669 ~w~~~~~~~~~~w~~~v~~i~~~~~~~~~Gs~ie~k-~~---~l~~~~~~~dp~~~~~~a~el~~~L~~~l~~~~~~v~~ 744 (856)
.|.... +.+.++++.+.+..||..++.. .. .+.+. .+... .+..+.+.+.+......+ +
T Consensus 78 ~~~~~l--------~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~----~~~~~~~~~~~~~~~~~~-~ 140 (231)
T 1wr8_A 78 IFLASM--------DEEWILWNEIRKRFPNARTSYTMPDRRAGLVIM----RETIN----VETVREIINELNLNLVAV-D 140 (231)
T ss_dssp EESCCC--------SHHHHHHHHHHHHCTTCCBCTTGGGCSSCEEEC----TTTSC----HHHHHHHHHHTTCSCEEE-E
T ss_pred EEeccH--------HHHHHHHHHHHHhCCCceEEecCCCceeeEEEE----CCCCC----HHHHHHHHHhcCCcEEEE-e
Confidence 333221 2344444444323444332100 00 01111 11111 122222222343333344 8
Q ss_pred cCeEEEEEeCCCCHHHHHHHHHHHhhhcCCCcceEEEEeCCchhHHHHHHccccccCCCCCCCccEEEEEeCCC----cc
Q 003025 745 GQFIVEVKPQGVSKGVVAEKIFTTMAESGRHADFVLCIGDDRSDEDMFEIIGNATSSGVLSSNASVFACTVGQK----PS 820 (856)
Q Consensus 745 g~~~vEI~p~gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~----~s 820 (856)
+..++|+.|.+++|+.+++++++++ |++++++++|||+.||++|++.+|. +|+||+. +.
T Consensus 141 ~~~~~ei~~~~~~K~~~~~~~~~~~---~~~~~~~~~iGD~~nD~~~~~~ag~--------------~v~~~~~~~~~~~ 203 (231)
T 1wr8_A 141 SGFAIHVKKPWINKGSGIEKASEFL---GIKPKEVAHVGDGENDLDAFKVVGY--------------KVAVAQAPKILKE 203 (231)
T ss_dssp CSSCEEEECTTCCHHHHHHHHHHHH---TSCGGGEEEEECSGGGHHHHHHSSE--------------EEECTTSCHHHHT
T ss_pred cCcEEEEecCCCChHHHHHHHHHHc---CCCHHHEEEECCCHHHHHHHHHcCC--------------eEEecCCCHHHHh
Confidence 8899999999999999999999999 9999999999999999999999985 4677765 35
Q ss_pred ccceEcCC--hhHHHHHHHHHHH
Q 003025 821 KAKYYLDD--AAEVVTMLEALAE 841 (856)
Q Consensus 821 ~A~y~l~~--~~eV~~~L~~L~~ 841 (856)
.|+|++++ .++|+++|+++..
T Consensus 204 ~a~~v~~~~~e~Gv~~~l~~~~~ 226 (231)
T 1wr8_A 204 NADYVTKKEYGEGGAEAIYHILE 226 (231)
T ss_dssp TCSEECSSCHHHHHHHHHHHHHH
T ss_pred hCCEEecCCCcchHHHHHHHHHH
Confidence 78999875 4679999999764
|
| >2qzs_A Glycogen synthase; glycosyl-transferase, GT-B fold, rossmann fold, closed-form, ADP and glucose binding, glycogen biosynthesis; HET: GLC ADP 250; 2.20A {Escherichia coli} PDB: 2r4t_A* 2r4u_A* 3guh_A* 3cx4_A* 3cop_A* 3d1j_A | Back alignment and structure |
|---|
Probab=99.88 E-value=1.7e-21 Score=225.19 Aligned_cols=299 Identities=18% Similarity=0.119 Sum_probs=205.6
Q ss_pred CEEEEeCcccchHHHHHHhhcCCCeEEEEEccCCCCh----HHHhc--CC-------------chHHHHHHhHhCCEEcc
Q 003025 202 DYVWIHDYHLMVLPTFLRRRFTRLRMGFFLHSPFPSS----EIYRT--LP-------------VREEILKALLNADLIGF 262 (856)
Q Consensus 202 D~VwihDyhl~llp~~lr~~~~~~~i~~flH~PfP~~----e~~~~--lp-------------~r~eil~~ll~~dligf 262 (856)
|+|++|+++..+++.+++.+..++|+.+.+|..++.. ..+.. ++ ...-....+-.+|.|..
T Consensus 131 Divh~~~~~~~~~~~~~~~~~~~~p~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~ 210 (485)
T 2qzs_A 131 DVVHAHDWHAGLAPAYLAARGRPAKSVFTVHNLAYQGMFYAHHMNDIQLPWSFFNIHGLEFNGQISFLKAGLYYADHITA 210 (485)
T ss_dssp SEEEEETGGGTTHHHHHHHTTCSSEEEEEESCTTCCCEEEGGGGGTTTCCGGGCSTTTTEETTEEEHHHHHHHHCSEEEE
T ss_pred CEEEeeccchhHHHHHHhhccCCCCEEEEecCccccCCCCHHHHHhcCCCchhcccccccccccccHHHHHHHhcCeEEe
Confidence 9999999998888888864456899999999876431 11111 01 01122234556898888
Q ss_pred cCHHHHHHHHHHHHhhhCceecccCceeeEEECCEE--EEEEEeecccCchHHHHHhcC-----------chHHHHHHHH
Q 003025 263 HTFDYARHFLSCCSRMLGLEYQSKRGYIGLEYYGRT--VGIKIMPVGIHMGQIESVLRL-----------ADKDWRVQEL 329 (856)
Q Consensus 263 ~t~~~~~~Fl~~~~r~lg~~~~~~~~~~~~~~~gr~--~~i~i~p~GId~~~~~~~~~~-----------~~~~~~~~~l 329 (856)
.+....+.+.+. ..|..... . + .... .++.++|+|||.+.|.+.... +........+
T Consensus 211 ~S~~~~~~~~~~---~~~~~~~~---~--~--~~~~~~~~~~vi~ngvd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (485)
T 2qzs_A 211 VSPTYAREITEP---QFAYGMEG---L--L--QQRHREGRLSGVLNGVDEKIWSPETDLLLASRYTRDTLEDKAENKRQL 280 (485)
T ss_dssp SSHHHHHHTTSH---HHHTTCHH---H--H--HHHHHTTCEEECCCCCCTTTSCTTTCTTSSSCCCTTCGGGGHHHHHHH
T ss_pred cCHHHHHHHhcc---ccCcchHH---H--H--HhhccCCceEEEecCCCccccCccccccccccccccchhHHHHhHHHH
Confidence 887666554321 01100000 0 0 0000 145678999999877542110 0011123456
Q ss_pred HHHcC-----CCeEEEeccCccccCCHHHHHHHHHHHHHhCCCCcCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhc
Q 003025 330 KQQFE-----GKTVLLGVDDMDIFKGVDLKLLAMEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINE 404 (856)
Q Consensus 330 ~~~~~-----~k~iil~VdRld~~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~~~~lv~~IN~ 404 (856)
++++. ++++|+++||+++.||+..+++|++++.+ ++ +.|+++|.. + .++++++++++.+.+
T Consensus 281 r~~~~~~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~--~~----~~l~ivG~g-----~--~~~~~~l~~~~~~~~- 346 (485)
T 2qzs_A 281 QIAMGLKVDDKVPLFAVVSRLTSQKGLDLVLEALPGLLE--QG----GQLALLGAG-----D--PVLQEGFLAAAAEYP- 346 (485)
T ss_dssp HHHHTCCCCTTSCEEEEEEEESGGGCHHHHHHHHHHHHH--TT----CEEEEEEEE-----C--HHHHHHHHHHHHHST-
T ss_pred HHHcCCCCCCCCeEEEEeccCccccCHHHHHHHHHHHhh--CC----cEEEEEeCC-----c--hHHHHHHHHHHHhCC-
Confidence 66652 67899999999999999999999999876 33 558888742 2 234566666666542
Q ss_pred ccCCCCcccEEEEcCCCCHHHHHHHHHhcceeeeccccccCCCcccceeeeecCCCCCCCCCCCCCCCCceEEecCCccc
Q 003025 405 TFGRPGYEPVVFIDKPVTLSERAAYYTIAECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIGC 484 (856)
Q Consensus 405 ~~~~~~~~pvv~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~ 484 (856)
..|+++.+. +.+++..+|+.||++|+||..||||++++|||+|+. |+|+|+.+|.
T Consensus 347 -------~~v~~~~g~-~~~~~~~~~~~adv~v~pS~~E~~g~~~lEAma~G~-----------------PvI~s~~gg~ 401 (485)
T 2qzs_A 347 -------GQVGVQIGY-HEAFSHRIMGGADVILVPSRFEPCGLTQLYGLKYGT-----------------LPLVRRTGGL 401 (485)
T ss_dssp -------TTEEEEESC-CHHHHHHHHHHCSEEEECCSCCSSCSHHHHHHHHTC-----------------EEEEESSHHH
T ss_pred -------CcEEEeCCC-CHHHHHHHHHhCCEEEECCccCCCcHHHHHHHHCCC-----------------CEEECCCCCc
Confidence 236667776 788889999999999999999999999999999954 9999999999
Q ss_pred ccccC------------CceeeCCCCHHHHHHHHHHHHc--CCHHHHHHHHHHHhhhhhcCCHHHHHHHHHHHHHHHHHh
Q 003025 485 SPSLS------------GAIRVNPWNIEATAEAMHEAIQ--MNEAEKQLRHEKHYRYVSTHDVAYWARSFFQDMERTCKD 550 (856)
Q Consensus 485 ~~~l~------------~al~VnP~d~~~~A~ai~~aL~--m~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~l~~~~~~ 550 (856)
.+.+. .|++|+|.|++++|++|.+++. .+++.++...++.++ ..+++...++++++-.++...+
T Consensus 402 ~e~v~~~~~~~~~~~~~~G~l~~~~d~~~la~~i~~ll~~~~~~~~~~~~~~~~~~--~~fs~~~~~~~~~~ly~~~~~~ 479 (485)
T 2qzs_A 402 ADTVSDCSLENLADGVASGFVFEDSNAWSLLRAIRRAFVLWSRPSLWRFVQRQAMA--MDFSWQVAAKSYRELYYRLKLE 479 (485)
T ss_dssp HHHCCBCCHHHHHTTCCCBEEECSSSHHHHHHHHHHHHHHHTSHHHHHHHHHHHHH--CCCCHHHHHHHHHHHHHHHC--
T ss_pred cceeccCccccccccccceEEECCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHh--hcCCHHHHHHHHHHHHHHhhhh
Confidence 98883 4899999999999999999994 245555444444443 7799999999998888776554
Q ss_pred h
Q 003025 551 H 551 (856)
Q Consensus 551 ~ 551 (856)
+
T Consensus 480 ~ 480 (485)
T 2qzs_A 480 H 480 (485)
T ss_dssp -
T ss_pred h
Confidence 3
|
| >1s2o_A SPP, sucrose-phosphatase; phosphohydrolase, HAD superfamily, cyanobacteria; 1.40A {Synechocystis SP} SCOP: c.108.1.10 PDB: 1tj3_A 1tj4_A* 1tj5_A* 1u2s_A* 1u2t_A* 2b1q_A* 2b1r_A* 2d2v_A* | Back alignment and structure |
|---|
Probab=99.88 E-value=1.8e-22 Score=212.87 Aligned_cols=215 Identities=14% Similarity=0.176 Sum_probs=142.1
Q ss_pred cEEEEEecCCCCCCCCCCCCCCCHHHHHHHHHHHhhCCCeEEEecCCChhhHHHhhcCC--C-CccEEeeCCEEEEeCCC
Q 003025 591 SRAILFDYDGTVMPQTSINKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSPC--K-KLGIAAEHGYFMRWSAD 667 (856)
Q Consensus 591 ~rlI~~DlDGTLl~~~~~~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~~--~-~lgliaenG~~I~~~~~ 667 (856)
.++|++|+||||++ .+..+ +++.++|+++ + .|+.|+|+|||++..+.+++..+ . ..+++++||+.|+....
T Consensus 3 ~~li~~DlDGTLl~---~~~~~-~~~~~~l~~~-~-~gi~v~iaTGR~~~~~~~~~~~l~l~~~~~~I~~NGa~i~~~~~ 76 (244)
T 1s2o_A 3 QLLLISDLDNTWVG---DQQAL-EHLQEYLGDR-R-GNFYLAYATGRSYHSARELQKQVGLMEPDYWLTAVGSEIYHPEG 76 (244)
T ss_dssp SEEEEECTBTTTBS---CHHHH-HHHHHHHHTT-G-GGEEEEEECSSCHHHHHHHHHHHTCCCCSEEEETTTTEEEETTE
T ss_pred CeEEEEeCCCCCcC---CHHHH-HHHHHHHHHh-c-CCCEEEEEcCCCHHHHHHHHHHcCCCCCCEEEECCCcEEEeCCC
Confidence 35999999999998 44433 6788888884 4 58999999999999999988653 2 24689999999987421
Q ss_pred --cceEecCCCCcccH-HHHHHHHHHHHhhcCCcceE----EecccceEEeeecCCCCCCchhHHHHHHHHHHHhcCCCe
Q 003025 668 --EEWQNCGQSVDFGW-IQIAEPVMKLYTESTDGSYI----EIKESALVWHHRDADPGFGSSQAKELLDHLESVLANEPA 740 (856)
Q Consensus 668 --~~w~~~~~~~~~~w-~~~v~~i~~~~~~~~~Gs~i----e~k~~~l~~~~~~~dp~~~~~~a~el~~~L~~~l~~~~~ 740 (856)
..|.... ...| .+.+.... ...++... +.+...+.+++. ++......+++.+.+.+. ...+
T Consensus 77 ~~~~~~~~~---~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~ki~~~~~---~~~~~~~~~~l~~~~~~~--~~~~ 144 (244)
T 1s2o_A 77 LDQHWADYL---SEHWQRDILQAIA----DGFEALKPQSPLEQNPWKISYHLD---PQACPTVIDQLTEMLKET--GIPV 144 (244)
T ss_dssp ECHHHHHHH---HTTCCHHHHHHHH----HTCTTEEECCGGGCBTTBEEEEEC---TTSCTHHHHHHHHHHHTS--SCCE
T ss_pred cChHHHHHH---hccccHHHHHHHH----HhccCccccCcccCCCeEEEEEeC---hhhHHHHHHHHHHHHHhc--CCCe
Confidence 1121111 0112 11122222 22222211 122334444432 221111223333333321 1123
Q ss_pred -EEEEcCeEEEEEeCCCCHHHHHHHHHHHhhhcCCCcceEEEEeCCchhHHHHHHccccccCCCCCCCccEEEEEeCCCc
Q 003025 741 -AVKSGQFIVEVKPQGVSKGVVAEKIFTTMAESGRHADFVLCIGDDRSDEDMFEIIGNATSSGVLSSNASVFACTVGQKP 819 (856)
Q Consensus 741 -~v~~g~~~vEI~p~gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~~ 819 (856)
.+.++..++||.|++++||.+++++++++ |++++++++|||+.||++||+.+|. +|+||+..
T Consensus 145 ~~~~s~~~~lei~~~~~~K~~~l~~l~~~~---~~~~~~~~~~GD~~nD~~m~~~~g~--------------~va~~na~ 207 (244)
T 1s2o_A 145 QVIFSSGKDVDLLPQRSNKGNATQYLQQHL---AMEPSQTLVCGDSGNDIGLFETSAR--------------GVIVRNAQ 207 (244)
T ss_dssp EEEEETTTEEEEEETTCSHHHHHHHHHHHT---TCCGGGEEEEECSGGGHHHHTSSSE--------------EEECTTCC
T ss_pred EEEEecCceEEeccCCCChHHHHHHHHHHh---CCCHHHEEEECCchhhHHHHhccCc--------------EEEEcCCc
Confidence 34577899999999999999999999999 9999999999999999999998874 68888752
Q ss_pred ----cc-------cceEcCC--hhHHHHHHHHHH
Q 003025 820 ----SK-------AKYYLDD--AAEVVTMLEALA 840 (856)
Q Consensus 820 ----s~-------A~y~l~~--~~eV~~~L~~L~ 840 (856)
.. |.|++.+ .++|++.|+++.
T Consensus 208 ~~~k~~a~~~~~~a~~v~~~~~~dGva~~i~~~~ 241 (244)
T 1s2o_A 208 PELLHWYDQWGDSRHYRAQSSHAGAILEAIAHFD 241 (244)
T ss_dssp HHHHHHHHHHCCTTEEECSSCHHHHHHHHHHHTT
T ss_pred HHHHHHHhcccccceeecCCcchhHHHHHHHHhc
Confidence 32 6788854 578999998764
|
| >2x6q_A Trehalose-synthase TRET; biosynthetic protein; 2.20A {Pyrococcus horikoshii} PDB: 2x6r_A 2xa1_A 2xa2_A* 2xa9_A* 2xmp_A* | Back alignment and structure |
|---|
Probab=99.88 E-value=2.4e-22 Score=227.47 Aligned_cols=298 Identities=17% Similarity=0.187 Sum_probs=204.8
Q ss_pred hHhHHHHHHHHHHHHHHHHHHcCCCCCEEEEeCcccchHHHHHHhhcCCCeEEEEEccCCCCh--HHHhcCCchHHHHHH
Q 003025 176 RSLWEAYVSANKIFSQRVIEVINPEDDYVWIHDYHLMVLPTFLRRRFTRLRMGFFLHSPFPSS--EIYRTLPVREEILKA 253 (856)
Q Consensus 176 ~~~w~~Y~~vN~~fa~~i~~~~~~~~D~VwihDyhl~llp~~lr~~~~~~~i~~flH~PfP~~--e~~~~lp~r~eil~~ 253 (856)
...|..|....+.+++.+ +..+| |+|++|+++...+..+++++ .|+.+.+|..++.. ..++ .+.+.
T Consensus 105 ~~~~~~~~~~~~~~~~~l-~~~~~--Dvv~~~~~~~~~~~~~~~~~---~p~v~~~h~~~~~~~~~~~~------~~~~~ 172 (416)
T 2x6q_A 105 EEMKELYLNVNRENSKFI-DLSSF--DYVLVHDPQPAALIEFYEKK---SPWLWRCHIDLSSPNREFWE------FLRRF 172 (416)
T ss_dssp HHHHHHHHHHHHHHHHSS-CGGGS--SEEEEESSTTGGGGGGSCCC---SCEEEECCSCCSSCCHHHHH------HHHHH
T ss_pred HHHHHHHHHHHHHHHHHH-hhcCC--CEEEEeccchhhHHHHHHhc---CCEEEEEccccCCccHHHHH------HHHHH
Confidence 344555655544444333 34455 99999999877766655432 78999999887642 1111 11222
Q ss_pred hHhCCEEcccCHHHHHHHHHHHHhhhCceecccCceeeEEECCEEEEEEEeecccCchHHHHHhcCchHHHHHHHHHHHc
Q 003025 254 LLNADLIGFHTFDYARHFLSCCSRMLGLEYQSKRGYIGLEYYGRTVGIKIMPVGIHMGQIESVLRLADKDWRVQELKQQF 333 (856)
Q Consensus 254 ll~~dligf~t~~~~~~Fl~~~~r~lg~~~~~~~~~~~~~~~gr~~~i~i~p~GId~~~~~~~~~~~~~~~~~~~l~~~~ 333 (856)
+..+|.+-+.+.++.+..+ .. .++.++|+|||...+...... ......+++++
T Consensus 173 ~~~~~~~i~~~s~~~~~~~----------------------~~--~~~~vi~ngvd~~~~~~~~~~---~~~~~~~r~~~ 225 (416)
T 2x6q_A 173 VEKYDRYIFHLPEYVQPEL----------------------DR--NKAVIMPPSIDPLSEKNVELK---QTEILRILERF 225 (416)
T ss_dssp HTTSSEEEESSGGGSCTTS----------------------CT--TTEEECCCCBCTTSTTTSCCC---HHHHHHHHHHT
T ss_pred HHhCCEEEEechHHHHhhC----------------------Cc--cceEEeCCCCChhhhcccccC---hhhHHHHHHHh
Confidence 3345554433332221100 00 235678999998765422111 22344566666
Q ss_pred ---CCCeEEEeccCccccCCHHHHHHHHHHHHHhCCCCcCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCC
Q 003025 334 ---EGKTVLLGVDDMDIFKGVDLKLLAMEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPG 410 (856)
Q Consensus 334 ---~~k~iil~VdRld~~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~~~~lv~~IN~~~~~~~ 410 (856)
+++++|+++||+.+.||+..+++|+..+.+++|+++ |+++|.... +.+ +..+.+++++++.+..
T Consensus 226 ~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~~~~~----l~i~G~g~~-~~~---~~~~~l~~~~~~~~~~----- 292 (416)
T 2x6q_A 226 DVDPEKPIITQVSRFDPWKGIFDVIEIYRKVKEKIPGVQ----LLLVGVMAH-DDP---EGWIYFEKTLRKIGED----- 292 (416)
T ss_dssp TCCTTSCEEEEECCCCTTSCHHHHHHHHHHHHHHCTTCE----EEEEECCCT-TCH---HHHHHHHHHHHHHTTC-----
T ss_pred CCCCCCcEEEEEeccccccCHHHHHHHHHHHHHhCCCeE----EEEEecCcc-cch---hHHHHHHHHHHHhCCC-----
Confidence 467899999999999999999999999999999765 888885431 112 2344555566555431
Q ss_pred cccEEEEc--CCCCHHHHHHHHHhcceeeeccccccCCCcccceeeeecCCCCCCCCCCCCCCCCceEEecCCccccccc
Q 003025 411 YEPVVFID--KPVTLSERAAYYTIAECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIGCSPSL 488 (856)
Q Consensus 411 ~~pvv~~~--~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l 488 (856)
..|.++. ..++.+++..+|+.||++|+||..||||++++|||+|+. |+|+|+.+|..+.+
T Consensus 293 -~~V~~~G~~~~~~~~~~~~~~~~ad~~v~ps~~E~~~~~~lEAma~G~-----------------PvI~~~~~g~~e~i 354 (416)
T 2x6q_A 293 -YDVKVLTNLIGVHAREVNAFQRASDVILQMSIREGFGLTVTEAMWKGK-----------------PVIGRAVGGIKFQI 354 (416)
T ss_dssp -TTEEEEEGGGTCCHHHHHHHHHHCSEEEECCSSCSSCHHHHHHHHTTC-----------------CEEEESCHHHHHHC
T ss_pred -CcEEEecccCCCCHHHHHHHHHhCCEEEECCCcCCCccHHHHHHHcCC-----------------CEEEccCCCChhhe
Confidence 1244432 255689999999999999999999999999999999954 99999999999888
Q ss_pred C---CceeeCCCCHHHHHHHHHHHHcCCHHHHHHHHHHHhhhhh-cCCHHHHHHHHHHHHHH
Q 003025 489 S---GAIRVNPWNIEATAEAMHEAIQMNEAEKQLRHEKHYRYVS-THDVAYWARSFFQDMER 546 (856)
Q Consensus 489 ~---~al~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~-~~~~~~W~~~~l~~l~~ 546 (856)
. .|++++ |++++|++|.++++ +++.++...++.++++. .+++...++.+++-+++
T Consensus 355 ~~~~~g~l~~--d~~~la~~i~~ll~-~~~~~~~~~~~a~~~~~~~fs~~~~~~~~~~~~~~ 413 (416)
T 2x6q_A 355 VDGETGFLVR--DANEAVEVVLYLLK-HPEVSKEMGAKAKERVRKNFIITKHMERYLDILNS 413 (416)
T ss_dssp CBTTTEEEES--SHHHHHHHHHHHHH-CHHHHHHHHHHHHHHHHHHTBHHHHHHHHHHHHHT
T ss_pred ecCCCeEEEC--CHHHHHHHHHHHHh-CHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHH
Confidence 3 488887 99999999999998 45556666667777775 68999999988876654
|
| >3oy2_A Glycosyltransferase B736L; rossmann fold, GDP-mannose, sugar, VIRU proteins, viral protein,transferase; 2.31A {Paramecium bursaria chlorella virus NY} PDB: 3oy7_A* | Back alignment and structure |
|---|
Probab=99.88 E-value=2e-21 Score=219.56 Aligned_cols=287 Identities=13% Similarity=0.138 Sum_probs=203.9
Q ss_pred HHcCCCCCEEEEeCcccchHHHHHHhh-cC-CCeEEEEEccCCCChHHHhcCCchHHHHHHhHhCC--EEcccCHHHHHH
Q 003025 195 EVINPEDDYVWIHDYHLMVLPTFLRRR-FT-RLRMGFFLHSPFPSSEIYRTLPVREEILKALLNAD--LIGFHTFDYARH 270 (856)
Q Consensus 195 ~~~~~~~D~VwihDyhl~llp~~lr~~-~~-~~~i~~flH~PfP~~e~~~~lp~r~eil~~ll~~d--ligf~t~~~~~~ 270 (856)
+..+| |+|++|.+...+.+.+.+.. .| ..++...+|...+..... +-..+-.+| .|-+.+....+.
T Consensus 78 ~~~~~--Div~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~ii~~S~~~~~~ 147 (413)
T 3oy2_A 78 DVHKP--DIVMIYNDPIVIGNYLLAMGKCSHRTKIVLYVDLVSKNIREN--------LWWIFSHPKVVGVMAMSKCWISD 147 (413)
T ss_dssp HHHCC--SEEEEEECHHHHHHHHHHGGGCCSCCEEEEEECCCSBSCCGG--------GGGGGGCTTEEEEEESSTHHHHH
T ss_pred HhcCC--CEEEEcchHHHHHHHHHHhccCCCCCceeeeccccchhhHHH--------HHHHHhccCCceEEEcCHHHHHH
Confidence 44566 99999944433333333322 22 356666777654432111 212233467 888777765555
Q ss_pred HHHHHHhhhCceecccCceeeEEECCEEEEEEEeecccCchHHHHHhcCchHHHHHHHHHHHc---C--CCeEEEeccCc
Q 003025 271 FLSCCSRMLGLEYQSKRGYIGLEYYGRTVGIKIMPVGIHMGQIESVLRLADKDWRVQELKQQF---E--GKTVLLGVDDM 345 (856)
Q Consensus 271 Fl~~~~r~lg~~~~~~~~~~~~~~~gr~~~i~i~p~GId~~~~~~~~~~~~~~~~~~~l~~~~---~--~k~iil~VdRl 345 (856)
+.+ +|. ..++.++|+|||...|. ..++++ + ++++|+++||+
T Consensus 148 ~~~-----~~~----------------~~~~~vi~ngvd~~~~~-------------~~~~~~~~~~~~~~~~il~vGr~ 193 (413)
T 3oy2_A 148 ICN-----YGC----------------KVPINIVSHFVDTKTIY-------------DARKLVGLSEYNDDVLFLNMNRN 193 (413)
T ss_dssp HHH-----TTC----------------CSCEEECCCCCCCCCCT-------------THHHHTTCGGGTTSEEEECCSCS
T ss_pred HHH-----cCC----------------CCceEEeCCCCCHHHHH-------------HHHHhcCCCcccCceEEEEcCCC
Confidence 543 232 12467899999997661 122222 2 68899999999
Q ss_pred cccCCHHHHHHHHHHHHHhCCCCcCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCcccEEEEcCCCCHHH
Q 003025 346 DIFKGVDLKLLAMEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDKPVTLSE 425 (856)
Q Consensus 346 d~~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~~~~lv~~IN~~~~~~~~~pvv~~~~~v~~~e 425 (856)
.+.||+..+++|+.++.+++|+++ |+.+|.+..... .++++.+++++++.+..-.-.-+..++++.|.++.++
T Consensus 194 ~~~Kg~~~li~a~~~l~~~~~~~~----l~ivG~g~~~~~---~~l~~~~~~~~~~~~l~~~v~~l~~vv~~~g~~~~~~ 266 (413)
T 3oy2_A 194 TARKRLDIYVLAAARFISKYPDAK----VRFLCNSHHESK---FDLHSIALRELVASGVDNVFTHLNKIMINRTVLTDER 266 (413)
T ss_dssp SGGGTHHHHHHHHHHHHHHCTTCC----EEEEEECCTTCS---CCHHHHHHHHHHHHTCSCHHHHHTTEEEECSCCCHHH
T ss_pred chhcCcHHHHHHHHHHHHhCCCcE----EEEEeCCcccch---hhHHHHHHHHHHHcCcccccccccceeeccCcCCHHH
Confidence 999999999999999999999876 888886442211 2245566666665432210000012688899999999
Q ss_pred HHHHHHhcceeeeccccccCCCcccceeeeecCCCCCCCCCCCCCCCCceEEecCCcccccccCC---------------
Q 003025 426 RAAYYTIAECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIGCSPSLSG--------------- 490 (856)
Q Consensus 426 l~aly~~ADv~vvtS~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~~--------------- 490 (856)
+.++|+.||++|+||..||||++++|||+|+. |+|+|+.+|..+.+.+
T Consensus 267 ~~~~~~~adv~v~pS~~E~~~~~~lEAma~G~-----------------PvI~s~~~g~~e~v~~~~~~~i~~~~~~~~~ 329 (413)
T 3oy2_A 267 VDMMYNACDVIVNCSSGEGFGLCSAEGAVLGK-----------------PLIISAVGGADDYFSGDCVYKIKPSAWISVD 329 (413)
T ss_dssp HHHHHHHCSEEEECCSCCSSCHHHHHHHTTTC-----------------CEEEECCHHHHHHSCTTTSEEECCCEEEECT
T ss_pred HHHHHHhCCEEEeCCCcCCCCcHHHHHHHcCC-----------------CEEEcCCCChHHHHccCcccccccccccccc
Confidence 99999999999999999999999999999954 9999999999888843
Q ss_pred ---ce--eeCCCCHHHHHHHHHHHHcCCHHHHHHHHHHHhhhh-hcCCHHHHHHHHHHHHHHHHHhh
Q 003025 491 ---AI--RVNPWNIEATAEAMHEAIQMNEAEKQLRHEKHYRYV-STHDVAYWARSFFQDMERTCKDH 551 (856)
Q Consensus 491 ---al--~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v-~~~~~~~W~~~~l~~l~~~~~~~ 551 (856)
|+ +++|.|++++|++| ++++ ++++++...++.++++ ..+++..+++++++-++++.+..
T Consensus 330 ~~~G~~gl~~~~d~~~la~~i-~l~~-~~~~~~~~~~~a~~~~~~~fs~~~~~~~~~~~~~~~~~~~ 394 (413)
T 3oy2_A 330 DRDGIGGIEGIIDVDDLVEAF-TFFK-DEKNRKEYGKRVQDFVKTKPTWDDISSDIIDFFNSLLRVE 394 (413)
T ss_dssp TTCSSCCEEEECCHHHHHHHH-HHTT-SHHHHHHHHHHHHHHHTTSCCHHHHHHHHHHHHHHHTC--
T ss_pred cccCcceeeCCCCHHHHHHHH-HHhc-CHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhhc
Confidence 77 99999999999999 9997 5666667777788887 56899999999999998877543
|
| >2rbk_A Putative uncharacterized protein; HAD-like phosphatase, unknown function; 1.00A {Bacteroides thetaiotaomicron} SCOP: c.108.1.10 PDB: 1ymq_A 2rb5_A 2rav_A 2rar_A | Back alignment and structure |
|---|
Probab=99.88 E-value=3.7e-22 Score=212.12 Aligned_cols=219 Identities=13% Similarity=0.163 Sum_probs=147.6
Q ss_pred EEEEEecCCCCCCCCCCCCC-CCHHHHHHHHHHHhhCCCeEEEecCCChhhHHHhhcCCC----CccEEeeCCEEEEeCC
Q 003025 592 RAILFDYDGTVMPQTSINKA-PSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSPCK----KLGIAAEHGYFMRWSA 666 (856)
Q Consensus 592 rlI~~DlDGTLl~~~~~~~~-~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~~~----~lgliaenG~~I~~~~ 666 (856)
|+|+||+||||++ +++. ++++++++|++| ++.|+.|+++|||+ ..+.+++..++ ..+++++||+.+...+
T Consensus 3 kli~~DlDGTLl~---~~~~~i~~~~~~al~~l-~~~G~~~~iaTGR~-~~~~~~~~~l~~~~~~~~~i~~nGa~i~~~~ 77 (261)
T 2rbk_A 3 KALFFDIDGTLVS---FETHRIPSSTIEALEAA-HAKGLKIFIATGRP-KAIINNLSELQDRNLIDGYITMNGAYCFVGE 77 (261)
T ss_dssp CEEEECSBTTTBC---TTTSSCCHHHHHHHHHH-HHTTCEEEEECSSC-GGGCCSCHHHHHTTCCCEEEEGGGTEEEETT
T ss_pred cEEEEeCCCCCcC---CCCCcCCHHHHHHHHHH-HHCCCEEEEECCCh-HHHHHHHHHhCcccccCeEEEeCCEEEEECC
Confidence 8999999999999 7777 999999999997 77899999999999 88877765433 2358999999998754
Q ss_pred CcceEecCCCCcccHHHHHHHHHHHHhhc--------CCcceEEecccceE-EeeecC---------------CCCCC--
Q 003025 667 DEEWQNCGQSVDFGWIQIAEPVMKLYTES--------TDGSYIEIKESALV-WHHRDA---------------DPGFG-- 720 (856)
Q Consensus 667 ~~~w~~~~~~~~~~w~~~v~~i~~~~~~~--------~~Gs~ie~k~~~l~-~~~~~~---------------dp~~~-- 720 (856)
...+.... +. +.+.++++...+. ..+.+.+.....+. .++... ++-+.
T Consensus 78 ~~i~~~~l---~~---~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~ 151 (261)
T 2rbk_A 78 EVIYKSAI---PQ---EEVKAMAAFCEKKGVPCIFVEEHNISVCQPNEMVKKIFYDFLHVNVIPTVSFEEASNKEVIQMT 151 (261)
T ss_dssp EEEEECCC---CH---HHHHHHHHHHHHHTCCEEEECSSCEEEESCCHHHHHHTTTTTCCCCCCBCCHHHHHTSCCSEEE
T ss_pred EEEEecCC---CH---HHHHHHHHHHHHcCCeEEEEeCCcEEEeCccHHHHHHHHHhhcccCCCccccchhccCceeEEE
Confidence 43444322 21 2333333333221 11222221100000 011100 00000
Q ss_pred chhHHHHHHHHHHHhcCCCeEEEEcCeEEEEEeCCCCHHHHHHHHHHHhhhcCCCcceEEEEeCCchhHHHHHHcccccc
Q 003025 721 SSQAKELLDHLESVLANEPAAVKSGQFIVEVKPQGVSKGVVAEKIFTTMAESGRHADFVLCIGDDRSDEDMFEIIGNATS 800 (856)
Q Consensus 721 ~~~a~el~~~L~~~l~~~~~~v~~g~~~vEI~p~gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~ 800 (856)
.....+....+.+.+.+ ...+.+++.++||.|.+++||.+++++++++ |++++++++|||+.||++|++.+|.
T Consensus 152 ~~~~~~~~~~~~~~~~~-~~~~~s~~~~~ei~~~~~~K~~~~~~~~~~~---~~~~~~~~~iGD~~nD~~~~~~ag~--- 224 (261)
T 2rbk_A 152 PFITEEEEKEVLPSIPT-CEIGRWYPAFADVTAKGDTKQKGIDEIIRHF---GIKLEETMSFGDGGNDISMLRHAAI--- 224 (261)
T ss_dssp ECCCHHHHHHHGGGSTT-CEEECSSTTCCEEESTTCSHHHHHHHHHHHH---TCCGGGEEEEECSGGGHHHHHHSSE---
T ss_pred EEeCHHHHHHHHHhcCC-eEEEEecCCeEEecCCCCChHHHHHHHHHHc---CCCHHHEEEECCCHHHHHHHHHcCc---
Confidence 00001112223333333 3445567889999999999999999999999 9999999999999999999999984
Q ss_pred CCCCCCCccEEEEEeCCC----ccccceEcCChhH--HHHHHHHH
Q 003025 801 SGVLSSNASVFACTVGQK----PSKAKYYLDDAAE--VVTMLEAL 839 (856)
Q Consensus 801 ~~~~~~~~~~~av~vG~~----~s~A~y~l~~~~e--V~~~L~~L 839 (856)
+|++|+. +..|+|++++.++ |.++|+++
T Consensus 225 -----------~v~~~n~~~~~~~~a~~v~~~~~~dGv~~~l~~~ 258 (261)
T 2rbk_A 225 -----------GVAMGQAKEDVKAAADYVTAPIDEDGISKAMKHF 258 (261)
T ss_dssp -----------EEECTTSCHHHHHHSSEECCCGGGTHHHHHHHHH
T ss_pred -----------eEEecCccHHHHhhCCEEeccCchhhHHHHHHHh
Confidence 6788875 3678999987655 99999876
|
| >1rzu_A Glycogen synthase 1; glycosyl-transferase, GT-B fold, rossmann fold, ADP-binding, transferase; HET: ADP; 2.30A {Agrobacterium tumefaciens} SCOP: c.87.1.8 PDB: 1rzv_A | Back alignment and structure |
|---|
Probab=99.88 E-value=9.3e-22 Score=227.31 Aligned_cols=292 Identities=13% Similarity=0.161 Sum_probs=205.2
Q ss_pred CEEEEeCcccchHHHHHHhh-cCCCeEEEEEccCCCCh----HHHhc--CCc-------------hHHHHHHhHhCCEEc
Q 003025 202 DYVWIHDYHLMVLPTFLRRR-FTRLRMGFFLHSPFPSS----EIYRT--LPV-------------REEILKALLNADLIG 261 (856)
Q Consensus 202 D~VwihDyhl~llp~~lr~~-~~~~~i~~flH~PfP~~----e~~~~--lp~-------------r~eil~~ll~~dlig 261 (856)
|+|++|+++..+++.++++. ..++|+.+.+|..++.. ..+.. +|. ..-.-..+-.+|.|-
T Consensus 132 DiIh~~~~~~~~~~~~~~~~~~~~~p~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi 211 (485)
T 1rzu_A 132 DMVHAHDWQAAMTPVYMRYAETPEIPSLLTIHNIAFQGQFGANIFSKLALPAHAFGMEGIEYYNDVSFLKGGLQTATALS 211 (485)
T ss_dssp SEEEEEHHHHTTHHHHHHHSSSCCCCEEEEESCTTCCCEECGGGGGGSCCCGGGSSTTTTEETTEEEHHHHHHHHCSEEE
T ss_pred CEEEecccchhHHHHHHhhcccCCCCEEEEecCccccCCCCHHHHhhcCCChhhcccccccccccccHHHHHHhhcCEEE
Confidence 99999999988888888764 46789999999876531 11111 110 112223455689888
Q ss_pred ccCHHHHHHHHHH-HH----hhhCceecccCceeeEEECCEEEEEEEeecccCchHHHHHhcC-----------chHHHH
Q 003025 262 FHTFDYARHFLSC-CS----RMLGLEYQSKRGYIGLEYYGRTVGIKIMPVGIHMGQIESVLRL-----------ADKDWR 325 (856)
Q Consensus 262 f~t~~~~~~Fl~~-~~----r~lg~~~~~~~~~~~~~~~gr~~~i~i~p~GId~~~~~~~~~~-----------~~~~~~ 325 (856)
..+....+.+.+. .. .+++.. ..++.++|+|||.+.|.+.... +.....
T Consensus 212 ~~S~~~~~~~~~~~~g~~~~~~~~~~---------------~~~~~vi~ngvd~~~~~~~~~~~~~~~~~~~~~~~~~~~ 276 (485)
T 1rzu_A 212 TVSPSYAEEILTAEFGMGLEGVIGSR---------------AHVLHGIVNGIDADVWNPATDHLIHDNYSAANLKNRALN 276 (485)
T ss_dssp ESCHHHHHHTTSHHHHTTCHHHHHTT---------------GGGEEECCCCBCTTTSCTTTCTTSSSCCBTTBCTTHHHH
T ss_pred ecCHhHHHHHhccccCcchHHHHHhh---------------cCCceEEcCCCcccccCCcccccccccccccchhhHHHh
Confidence 8887666555431 00 001110 1235678999999877543210 011122
Q ss_pred HHHHHHHc---CC-CeEEEeccCccccCCHHHHHHHHHHHHHhCCCCcCceEEEEEecCCCCCchhHHHHHHHHHHHHHH
Q 003025 326 VQELKQQF---EG-KTVLLGVDDMDIFKGVDLKLLAMEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKR 401 (856)
Q Consensus 326 ~~~l~~~~---~~-k~iil~VdRld~~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~~~~lv~~ 401 (856)
...+++++ .+ +++|++|||+++.||+..+++|+.++.+ ++ +.|+++|.. + .++++++++++.+
T Consensus 277 ~~~~r~~~~~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~--~~----~~l~ivG~g-----~--~~~~~~l~~~~~~ 343 (485)
T 1rzu_A 277 KKAVAEHFRIDDDGSPLFCVISRLTWQKGIDLMAEAVDEIVS--LG----GRLVVLGAG-----D--VALEGALLAAASR 343 (485)
T ss_dssp HHHHHHHHTCCCSSSCEEEEESCBSTTTTHHHHHTTHHHHHH--TT----CEEEEEECB-----C--HHHHHHHHHHHHH
T ss_pred HHHHHHhcCCCCCCCeEEEEEccCccccCHHHHHHHHHHHHh--cC----ceEEEEeCC-----c--hHHHHHHHHHHHh
Confidence 34556665 22 6799999999999999999999999876 33 558888742 2 2345666666666
Q ss_pred HhcccCCCCcccEEEEcCCCCHHHHHHHHHhcceeeeccccccCCCcccceeeeecCCCCCCCCCCCCCCCCceEEecCC
Q 003025 402 INETFGRPGYEPVVFIDKPVTLSERAAYYTIAECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEF 481 (856)
Q Consensus 402 IN~~~~~~~~~pvv~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~g~lV~Se~ 481 (856)
.+ ..|+++.+. +.+++..+|+.||+||+||..||||++++|||+|+. |+|+|+.
T Consensus 344 ~~--------~~v~~~~g~-~~~~~~~~~~~adv~v~pS~~E~~~~~~lEAma~G~-----------------PvI~s~~ 397 (485)
T 1rzu_A 344 HH--------GRVGVAIGY-NEPLSHLMQAGCDAIIIPSRFEPCGLTQLYALRYGC-----------------IPVVART 397 (485)
T ss_dssp TT--------TTEEEEESC-CHHHHHHHHHHCSEEEECCSCCSSCSHHHHHHHHTC-----------------EEEEESS
T ss_pred CC--------CcEEEecCC-CHHHHHHHHhcCCEEEECcccCCCCHHHHHHHHCCC-----------------CEEEeCC
Confidence 42 136666766 888889999999999999999999999999999954 9999999
Q ss_pred cccccccC------------CceeeCCCCHHHHHHHHHHHHc--CCHHHHHHHHHHHhhhhhcCCHHHHHHHHHHHHHHH
Q 003025 482 IGCSPSLS------------GAIRVNPWNIEATAEAMHEAIQ--MNEAEKQLRHEKHYRYVSTHDVAYWARSFFQDMERT 547 (856)
Q Consensus 482 ~G~~~~l~------------~al~VnP~d~~~~A~ai~~aL~--m~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~l~~~ 547 (856)
+|..+.+. .|++|+|.|++++|++|.+++. .+++.++...++.++ ..+++...++++++-.+++
T Consensus 398 gg~~e~v~~~~~~~~~~~~~~G~l~~~~d~~~la~~i~~ll~~~~~~~~~~~~~~~~~~--~~fs~~~~~~~~~~~y~~~ 475 (485)
T 1rzu_A 398 GGLADTVIDANHAALASKAATGVQFSPVTLDGLKQAIRRTVRYYHDPKLWTQMQKLGMK--SDVSWEKSAGLYAALYSQL 475 (485)
T ss_dssp HHHHHHCCBCCHHHHHTTCCCBEEESSCSHHHHHHHHHHHHHHHTCHHHHHHHHHHHHT--CCCBHHHHHHHHHHHHHHH
T ss_pred CChhheecccccccccccCCcceEeCCCCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH--HhCChHHHHHHHHHHHHHh
Confidence 99998883 4799999999999999999994 245555554444443 7789999999988877765
Q ss_pred HH
Q 003025 548 CK 549 (856)
Q Consensus 548 ~~ 549 (856)
..
T Consensus 476 ~~ 477 (485)
T 1rzu_A 476 IS 477 (485)
T ss_dssp TC
T ss_pred hC
Confidence 44
|
| >2jjm_A Glycosyl transferase, group 1 family protein; anthrax, nucleotide, carbohydrate; 3.10A {Bacillus anthracis} PDB: 3mbo_A* | Back alignment and structure |
|---|
Probab=99.87 E-value=1.3e-21 Score=219.77 Aligned_cols=285 Identities=13% Similarity=0.161 Sum_probs=198.8
Q ss_pred HHHHcCCCCCEEEEeCcccchHHHHHHhhc-C-CCeEEEEEccCCCChHHHhcCCchHHHH-HHhHhCCEEcccCHHHHH
Q 003025 193 VIEVINPEDDYVWIHDYHLMVLPTFLRRRF-T-RLRMGFFLHSPFPSSEIYRTLPVREEIL-KALLNADLIGFHTFDYAR 269 (856)
Q Consensus 193 i~~~~~~~~D~VwihDyhl~llp~~lr~~~-~-~~~i~~flH~PfP~~e~~~~lp~r~eil-~~ll~~dligf~t~~~~~ 269 (856)
+++..+| |+|++|..+...++.++.++. . ++|+.+.+|...+ ..+..-+....+. ..+-.+|.|-..+....+
T Consensus 94 ~l~~~~~--Dvv~~~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~--~~~~~~~~~~~~~~~~~~~ad~ii~~s~~~~~ 169 (394)
T 2jjm_A 94 VAQRENL--DILHVHYAIPHAICAYLAKQMIGERIKIVTTLHGTDI--TVLGSDPSLNNLIRFGIEQSDVVTAVSHSLIN 169 (394)
T ss_dssp HHHHHTC--SEEEECSSTTHHHHHHHHHHHTTTCSEEEEECCHHHH--HTTTTCTTTHHHHHHHHHHSSEEEESCHHHHH
T ss_pred HHHHcCC--CEEEEcchhHHHHHHHHHHHhhcCCCCEEEEEecCcc--cccCCCHHHHHHHHHHHhhCCEEEECCHHHHH
Confidence 3344577 899999876555555554433 2 6899999996422 1111112222232 334568999888876665
Q ss_pred HHHHHHHhhhCceecccCceeeEEECCEEEEEEEeecccCchHHHHHhcCchHHHHHHHHHHHc---CCCeEEEeccCcc
Q 003025 270 HFLSCCSRMLGLEYQSKRGYIGLEYYGRTVGIKIMPVGIHMGQIESVLRLADKDWRVQELKQQF---EGKTVLLGVDDMD 346 (856)
Q Consensus 270 ~Fl~~~~r~lg~~~~~~~~~~~~~~~gr~~~i~i~p~GId~~~~~~~~~~~~~~~~~~~l~~~~---~~k~iil~VdRld 346 (856)
.+.+ ..+. ..++.++|+|||...|.+. + ...+++++ .++++|+++||+.
T Consensus 170 ~~~~----~~~~----------------~~~~~vi~ngv~~~~~~~~---~-----~~~~~~~~~~~~~~~~i~~~G~~~ 221 (394)
T 2jjm_A 170 ETHE----LVKP----------------NKDIQTVYNFIDERVYFKR---D-----MTQLKKEYGISESEKILIHISNFR 221 (394)
T ss_dssp HHHH----HTCC----------------SSCEEECCCCCCTTTCCCC---C-----CHHHHHHTTCC---CEEEEECCCC
T ss_pred HHHH----hhCC----------------cccEEEecCCccHHhcCCc---c-----hHHHHHHcCCCCCCeEEEEeeccc
Confidence 5543 1111 1245678999998876421 1 12344444 4578999999999
Q ss_pred ccCCHHHHHHHHHHHHHhCCCCcCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCcccEEEEcCCCCHHHH
Q 003025 347 IFKGVDLKLLAMEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDKPVTLSER 426 (856)
Q Consensus 347 ~~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~~~~lv~~IN~~~~~~~~~pvv~~~~~v~~~el 426 (856)
+.||+..+++|++.+.++ ++ +.|+++|. +++.++++ +++++.+ ..+.+.+.+. .+++
T Consensus 222 ~~Kg~~~li~a~~~l~~~-~~----~~l~i~G~-----g~~~~~l~----~~~~~~~-------l~~~v~~~g~--~~~~ 278 (394)
T 2jjm_A 222 KVKRVQDVVQAFAKIVTE-VD----AKLLLVGD-----GPEFCTIL----QLVKNLH-------IEDRVLFLGK--QDNV 278 (394)
T ss_dssp GGGTHHHHHHHHHHHHHS-SC----CEEEEECC-----CTTHHHHH----HHHHTTT-------CGGGBCCCBS--CSCT
T ss_pred cccCHHHHHHHHHHHHhh-CC----CEEEEECC-----chHHHHHH----HHHHHcC-------CCCeEEEeCc--hhhH
Confidence 999999999999999876 43 34777763 34433443 4444322 2222334443 5789
Q ss_pred HHHHHhcceeeeccccccCCCcccceeeeecCCCCCCCCCCCCCCCCceEEecCCcccccccC---CceeeCCCCHHHHH
Q 003025 427 AAYYTIAECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIGCSPSLS---GAIRVNPWNIEATA 503 (856)
Q Consensus 427 ~aly~~ADv~vvtS~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~al~VnP~d~~~~A 503 (856)
..+|+.||++|+||..||||++++|||+|+. |+|+|+.+|..+.+. .|++++|.|++++|
T Consensus 279 ~~~~~~adv~v~ps~~e~~~~~~~EAma~G~-----------------PvI~~~~~~~~e~v~~~~~g~~~~~~d~~~la 341 (394)
T 2jjm_A 279 AELLAMSDLMLLLSEKESFGLVLLEAMACGV-----------------PCIGTRVGGIPEVIQHGDTGYLCEVGDTTGVA 341 (394)
T ss_dssp HHHHHTCSEEEECCSCCSCCHHHHHHHHTTC-----------------CEEEECCTTSTTTCCBTTTEEEECTTCHHHHH
T ss_pred HHHHHhCCEEEeccccCCCchHHHHHHhcCC-----------------CEEEecCCChHHHhhcCCceEEeCCCCHHHHH
Confidence 9999999999999999999999999999954 999999999998883 48999999999999
Q ss_pred HHHHHHHcCCHHHHHHHHHHHhhhh-hcCCHHHHHHHHHHHHHHHHHh
Q 003025 504 EAMHEAIQMNEAEKQLRHEKHYRYV-STHDVAYWARSFFQDMERTCKD 550 (856)
Q Consensus 504 ~ai~~aL~m~~~er~~r~~~~~~~v-~~~~~~~W~~~~l~~l~~~~~~ 550 (856)
++|.++++ +++.++...++.++++ ..+++..+++.+++-++++...
T Consensus 342 ~~i~~l~~-~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~ 388 (394)
T 2jjm_A 342 DQAIQLLK-DEELHRNMGERARESVYEQFRSEKIVSQYETIYYDVLRD 388 (394)
T ss_dssp HHHHHHHH-CHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHTC--
T ss_pred HHHHHHHc-CHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhh
Confidence 99999998 4555666667778888 7899999999999888876543
|
| >2gek_A Phosphatidylinositol mannosyltransferase (PIMA); GT4 glycosyltransferase, rossmann fold, complex; HET: GDP; 2.40A {Mycobacterium smegmatis} PDB: 2gej_A* | Back alignment and structure |
|---|
Probab=99.87 E-value=3.9e-21 Score=215.86 Aligned_cols=279 Identities=13% Similarity=0.094 Sum_probs=210.0
Q ss_pred HHHHcCCCCCEEEEeCcccchHHHHHHhhcCCCeEEEEEccCCCChHHHhcCCchHHHHHHhHhCCEEcccCHHHHHHHH
Q 003025 193 VIEVINPEDDYVWIHDYHLMVLPTFLRRRFTRLRMGFFLHSPFPSSEIYRTLPVREEILKALLNADLIGFHTFDYARHFL 272 (856)
Q Consensus 193 i~~~~~~~~D~VwihDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~~~~lp~r~eil~~ll~~dligf~t~~~~~~Fl 272 (856)
+++..+| |+|++|.+....+..++.+. .+.++.+.+|..+|....++.+-..-+ ..+-.+|.+-+.+....+.+.
T Consensus 102 ~l~~~~~--Dii~~~~~~~~~~~~~~~~~-~~~~~i~~~h~~~~~~~~~~~~~~~~~--~~~~~~d~ii~~s~~~~~~~~ 176 (406)
T 2gek_A 102 WIAEGDF--DVLHIHEPNAPSLSMLALQA-AEGPIVATFHTSTTKSLTLSVFQGILR--PYHEKIIGRIAVSDLARRWQM 176 (406)
T ss_dssp HHHHHCC--SEEEEECCCSSSHHHHHHHH-EESSEEEEECCCCCSHHHHHHHHSTTH--HHHTTCSEEEESSHHHHHHHH
T ss_pred HHHhcCC--CEEEECCccchHHHHHHHHh-cCCCEEEEEcCcchhhhhHHHHHHHHH--HHHhhCCEEEECCHHHHHHHH
Confidence 3444566 99999999987775555444 368999999999887644332111111 445578999988876665555
Q ss_pred HHHHhhhCceecccCceeeEEECCEEEEEEEeecccCchHHHHHhcCchHHHHHHHHHHHc-CCCeEEEeccCc-cccCC
Q 003025 273 SCCSRMLGLEYQSKRGYIGLEYYGRTVGIKIMPVGIHMGQIESVLRLADKDWRVQELKQQF-EGKTVLLGVDDM-DIFKG 350 (856)
Q Consensus 273 ~~~~r~lg~~~~~~~~~~~~~~~gr~~~i~i~p~GId~~~~~~~~~~~~~~~~~~~l~~~~-~~k~iil~VdRl-d~~KG 350 (856)
+. ++. .++ ++|+|+|...|...... ... +++++|+++||+ .+.||
T Consensus 177 ~~----~~~-----------------~~~-vi~~~v~~~~~~~~~~~-----------~~~~~~~~~i~~~G~~~~~~Kg 223 (406)
T 2gek_A 177 EA----LGS-----------------DAV-EIPNGVDVASFADAPLL-----------DGYPREGRTVLFLGRYDEPRKG 223 (406)
T ss_dssp HH----HSS-----------------CEE-ECCCCBCHHHHHTCCCC-----------TTCSCSSCEEEEESCTTSGGGC
T ss_pred Hh----cCC-----------------CcE-EecCCCChhhcCCCchh-----------hhccCCCeEEEEEeeeCccccC
Confidence 41 111 146 78999999887643211 011 256899999999 99999
Q ss_pred HHHHHHHHHHHHHhCCCCcCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCcccEEEEcCCCCHHHHHHHH
Q 003025 351 VDLKLLAMEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDKPVTLSERAAYY 430 (856)
Q Consensus 351 i~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~~~~lv~~IN~~~~~~~~~pvv~~~~~v~~~el~aly 430 (856)
+..+++|+.++.+++|+++ |+.+|. ++. +++++.+ ++. .+.+.+.|.++.+|+..+|
T Consensus 224 ~~~li~a~~~l~~~~~~~~----l~i~G~-----~~~-~~l~~~~----~~~---------~~~v~~~g~~~~~~~~~~~ 280 (406)
T 2gek_A 224 MAVLLAALPKLVARFPDVE----ILIVGR-----GDE-DELREQA----GDL---------AGHLRFLGQVDDATKASAM 280 (406)
T ss_dssp HHHHHHHHHHHHTTSTTCE----EEEESC-----SCH-HHHHHHT----GGG---------GGGEEECCSCCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHCCCeE----EEEEcC-----CcH-HHHHHHH----Hhc---------cCcEEEEecCCHHHHHHHH
Confidence 9999999999999888765 777764 333 3444333 222 1244568899999999999
Q ss_pred Hhcceeeeccc-cccCCCcccceeeeecCCCCCCCCCCCCCCCCceEEecCCcccccccC---CceeeCCCCHHHHHHHH
Q 003025 431 TIAECVVVTAV-RDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIGCSPSLS---GAIRVNPWNIEATAEAM 506 (856)
Q Consensus 431 ~~ADv~vvtS~-~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~al~VnP~d~~~~A~ai 506 (856)
+.||++|+||. .||||++++|||+|+. |+|+|..+|..+.+. .|++++|.|+++++++|
T Consensus 281 ~~adv~v~ps~~~e~~~~~~~Ea~a~G~-----------------PvI~~~~~~~~e~i~~~~~g~~~~~~d~~~l~~~i 343 (406)
T 2gek_A 281 RSADVYCAPHLGGESFGIVLVEAMAAGT-----------------AVVASDLDAFRRVLADGDAGRLVPVDDADGMAAAL 343 (406)
T ss_dssp HHSSEEEECCCSCCSSCHHHHHHHHHTC-----------------EEEECCCHHHHHHHTTTTSSEECCTTCHHHHHHHH
T ss_pred HHCCEEEecCCCCCCCchHHHHHHHcCC-----------------CEEEecCCcHHHHhcCCCceEEeCCCCHHHHHHHH
Confidence 99999999997 9999999999999954 999999999888884 48999999999999999
Q ss_pred HHHHcCCHHHHHHHHHHHhhhhhcCCHHHHHHHHHHHHHHHHHh
Q 003025 507 HEAIQMNEAEKQLRHEKHYRYVSTHDVAYWARSFFQDMERTCKD 550 (856)
Q Consensus 507 ~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~l~~~~~~ 550 (856)
.++++ +++.+....++.++++..+++...++.+++-+++....
T Consensus 344 ~~l~~-~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~ 386 (406)
T 2gek_A 344 IGILE-DDQLRAGYVARASERVHRYDWSVVSAQIMRVYETVSGA 386 (406)
T ss_dssp HHHHH-CHHHHHHHHHHHHHHGGGGBHHHHHHHHHHHHHHHCCT
T ss_pred HHHHc-CHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhh
Confidence 99998 45556666677788888999999999999888876654
|
| >3s28_A Sucrose synthase 1; glycosyltransferase, sucrose metabolism, sugar donar complex rossmann fold, GT-B fold, glycosyltansferase, UDP-glucose; HET: UDP LCN NHF; 2.80A {Arabidopsis thaliana} PDB: 3s27_A* 3s29_A* | Back alignment and structure |
|---|
Probab=99.86 E-value=6.3e-22 Score=239.95 Aligned_cols=310 Identities=11% Similarity=0.091 Sum_probs=208.2
Q ss_pred CEEEEeCcccchHHHHHHhhcCCCeEEEEEccCCCChHHHhcCCchH---------H---HHHHhHhCCEEcccCHHHHH
Q 003025 202 DYVWIHDYHLMVLPTFLRRRFTRLRMGFFLHSPFPSSEIYRTLPVRE---------E---ILKALLNADLIGFHTFDYAR 269 (856)
Q Consensus 202 D~VwihDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~~~~lp~r~---------e---il~~ll~~dligf~t~~~~~ 269 (856)
|+|+.|++...+++.+++++. ++|+.+..|...+..-......|+. . -...+-.||.|-..|...++
T Consensus 409 DVIHsH~~~sglva~llar~~-gvP~V~T~Hsl~~~k~~~~~~~~~~~~~~y~~~~r~~aE~~~l~~AD~VIa~S~~~~~ 487 (816)
T 3s28_A 409 DLIIGNYSDGNLVASLLAHKL-GVTQCTIAHALEKTKYPDSDIYWKKLDDKYHFSCQFTADIFAMNHTDFIITSTFQEIA 487 (816)
T ss_dssp SEEEEEHHHHHHHHHHHHHHH-TCCEEEECSCCHHHHSTTTTTTHHHHHHHHCHHHHHHHHHHHHHHSSEEEESCHHHHH
T ss_pred eEEEeCCchHHHHHHHHHHHc-CCCEEEEEecccccccccccchhhhHHHHHHHHHHHHHHHHHHHhCCEEEECCHHHHH
Confidence 999999877666666666554 7999999997543211111111110 0 01145578888877765554
Q ss_pred HHHHHHHhhhCceecccCc---------eeeEEECCEEEEEEEeecccCchHHHHHhcCch----HHHHHHHH-------
Q 003025 270 HFLSCCSRMLGLEYQSKRG---------YIGLEYYGRTVGIKIMPVGIHMGQIESVLRLAD----KDWRVQEL------- 329 (856)
Q Consensus 270 ~Fl~~~~r~lg~~~~~~~~---------~~~~~~~gr~~~i~i~p~GId~~~~~~~~~~~~----~~~~~~~l------- 329 (856)
.....+.. +....+ .-++..... ++.++|+|||.+.|.+...... .......+
T Consensus 488 ~l~~~~~~-----y~~~~~~~~p~Lyr~~~gI~~~~~--ki~VIpnGVD~~~F~P~~~~~~Rl~~~~~~i~~~l~~p~~~ 560 (816)
T 3s28_A 488 GSKETVGQ-----YESHTAFTLPGLYRVVHGIDVFDP--KFNIVSPGADMSIYFPYTEEKRRLTKFHSEIEELLYSDVEN 560 (816)
T ss_dssp CCSSSCCT-----TGGGSSEEETTTEEEEESCCTTCT--TEEECCCCCCTTTSCCTTCTTTCCGGGHHHHHHHHHCSCCB
T ss_pred HHHHHHHH-----hhhhhccccchhhhcccccccCCC--CEEEECCCcCHHHcCccchhhhhhhhccccccccccchhhH
Confidence 32110000 000000 000111111 6788999999998865432111 11111111
Q ss_pred HHH-----cCCCeEEEeccCccccCCHHHHHHHHHHHHHhCCCCcCceEEEEEecCC--CCCchhHHHHHHHHHHHHHHH
Q 003025 330 KQQ-----FEGKTVLLGVDDMDIFKGVDLKLLAMEHLLKQHPKWQGRAVLVQIANPA--RGRGKDLEEIQAEIHATCKRI 402 (856)
Q Consensus 330 ~~~-----~~~k~iil~VdRld~~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~--r~~~~~~~~l~~~~~~lv~~I 402 (856)
++. ..++++|+++||+++.||+..+++|+.++.+++|+++ |+++|.+. ....++..+..+++.+++++.
T Consensus 561 r~~lg~l~~~~~~vIl~vGRl~~~KGid~LIeA~~~L~~~~~~v~----LvIvG~g~~~~~~~~e~~~~~~~L~~li~~l 636 (816)
T 3s28_A 561 KEHLCVLKDKKKPILFTMARLDRVKNLSGLVEWYGKNTRLRELAN----LVVVGGDRRKESKDNEEKAEMKKMYDLIEEY 636 (816)
T ss_dssp TTEESCBSCTTSCEEEEECCCCTTTTHHHHHHHHHHCHHHHHHCE----EEEECCCTTSCCCCHHHHHHHHHHHHHHHHT
T ss_pred HHHhcccCCCCCeEEEEEccCcccCCHHHHHHHHHHHHhhCCCeE----EEEEeCCCcccccchhhHHHHHHHHHHHHHc
Confidence 111 2467899999999999999999999999988777654 88888654 222334445667777777775
Q ss_pred hcccCCCCcccEEEEcC----CCCHHHHHHHHH-hcceeeeccccccCCCcccceeeeecCCCCCCCCCCCCCCCCceEE
Q 003025 403 NETFGRPGYEPVVFIDK----PVTLSERAAYYT-IAECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLV 477 (856)
Q Consensus 403 N~~~~~~~~~pvv~~~~----~v~~~el~aly~-~ADv~vvtS~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~g~lV 477 (856)
+. .+.+.+.| .++.+|+..+|+ +||+||+||..||||++++|||||+. |+|
T Consensus 637 gL-------~~~V~flG~~~~~v~~~eL~~~~~~aaDvfV~PS~~EgfglvllEAMA~G~-----------------PVI 692 (816)
T 3s28_A 637 KL-------NGQFRWISSQMDRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGL-----------------PTF 692 (816)
T ss_dssp TC-------BBBEEEECCCCCHHHHHHHHHHHHHTTCEEEECCSCBSSCHHHHHHHHTTC-----------------CEE
T ss_pred CC-------CCcEEEccCccccCCHHHHHHHHHhcCeEEEECCCccCccHHHHHHHHcCC-----------------CEE
Confidence 42 23444555 455689999998 68999999999999999999999954 999
Q ss_pred ecCCcccccccC---CceeeCCCCHHHHHHHHHHHHc---CCHHHHHHHHHHHhhhh-hcCCHHHHHHHHHHHHHHH
Q 003025 478 VSEFIGCSPSLS---GAIRVNPWNIEATAEAMHEAIQ---MNEAEKQLRHEKHYRYV-STHDVAYWARSFFQDMERT 547 (856)
Q Consensus 478 ~Se~~G~~~~l~---~al~VnP~d~~~~A~ai~~aL~---m~~~er~~r~~~~~~~v-~~~~~~~W~~~~l~~l~~~ 547 (856)
+|+.+|..+.+. .|++|+|.|++++|++|.++++ .+++.+....++.++++ +.+++..+++++++-.++.
T Consensus 693 asd~GG~~EiV~dg~~Gllv~p~D~e~LA~aI~~lL~~Ll~d~~~~~~m~~~ar~~a~~~fSwe~~a~~ll~lY~~~ 769 (816)
T 3s28_A 693 ATCKGGPAEIIVHGKSGFHIDPYHGDQAADTLADFFTKCKEDPSHWDEISKGGLQRIEEKYTWQIYSQRLLTLTGVY 769 (816)
T ss_dssp EESSBTHHHHCCBTTTBEEECTTSHHHHHHHHHHHHHHHHHCTHHHHHHHHHHHHHHHHSCCHHHHHHHHHHHHHHH
T ss_pred EeCCCChHHHHccCCcEEEeCCCCHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHH
Confidence 999999999983 4899999999999999988772 34556666677788888 7799999999998866653
|
| >2zos_A MPGP, mannosyl-3-phosphoglycerate phosphatase; haloacid dehalogenase like hydrolase, mannosylglycerate, cytoplasm, hydrolase, magnesium; 1.70A {Pyrococcus horikoshii} PDB: 1wzc_A | Back alignment and structure |
|---|
Probab=99.86 E-value=1.4e-21 Score=206.45 Aligned_cols=198 Identities=17% Similarity=0.144 Sum_probs=129.5
Q ss_pred CcEEEEEecCCCCCCCCCCCCCCCHHHHHHHHHHHhhCCCeEEEecCCChhhHHHhhcCCC-CccEEeeCCEEEEeCCC-
Q 003025 590 KSRAILFDYDGTVMPQTSINKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSPCK-KLGIAAEHGYFMRWSAD- 667 (856)
Q Consensus 590 ~~rlI~~DlDGTLl~~~~~~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~~~-~lgliaenG~~I~~~~~- 667 (856)
|+|+|++|+||||+ . +..+++ ++++|++| +++|+.|+|+|||+...+..++..+. ..+++++||+.|...+.
T Consensus 1 Mikli~~DlDGTLl-~---~~~~~~-~~~~l~~l-~~~g~~~~i~Tgr~~~~~~~~~~~~~~~~~~I~~NGa~i~~~~~~ 74 (249)
T 2zos_A 1 MIRLIFLDIDKTLI-P---GYEPDP-AKPIIEEL-KDMGFEIIFNSSKTRAEQEYYRKELEVETPFISENGSAIFIPKGY 74 (249)
T ss_dssp CEEEEEECCSTTTC-T---TSCSGG-GHHHHHHH-HHTTEEEEEBCSSCHHHHHHHHHHHTCCSCEEETTTTEEECCTTC
T ss_pred CccEEEEeCCCCcc-C---CCCcHH-HHHHHHHH-HHCCCEEEEEeCCCHHHHHHHHHHcCCCccEEEeCCeEEEccCCc
Confidence 47999999999999 2 344544 99999997 78899999999999999998886653 34799999999987632
Q ss_pred -------------cceEecCCCCcccHHHHHHHHHHHHhhcCC----cce----------EEe--------cccceEEee
Q 003025 668 -------------EEWQNCGQSVDFGWIQIAEPVMKLYTESTD----GSY----------IEI--------KESALVWHH 712 (856)
Q Consensus 668 -------------~~w~~~~~~~~~~w~~~v~~i~~~~~~~~~----Gs~----------ie~--------k~~~l~~~~ 712 (856)
..+.... + .+.+.++++.+.+... ... +.. ........+
T Consensus 75 ~~~~~~~~~~~~~~i~~~~l---~---~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (249)
T 2zos_A 75 FPFDVKGKEVGNYIVIELGI---R---VEKIREELKKLENIYGLKYYGNSTKEEIEKFTGMPPELVPLAMEREYSETIFE 148 (249)
T ss_dssp CC------CCCCCCEEECSC---C---HHHHHHHHHHHHHHHTCEEGGGSCHHHHHHHHCCCTTTHHHHHCCSSCEEEEE
T ss_pred ccccccccccCceEEEecCC---C---HHHHHHHHHHHHhhcCEEEecCCCHHHHHHHhCCChhHhhhhhhhhhcCceEe
Confidence 2222221 1 1222333322221100 000 000 000000001
Q ss_pred ecCCCCCCchhHHHHHHHHHHHhcCCCeEEEEcCeEEEEEeCCCCHHHHHHHHHHHhhhcCC-CcceEEEEeCCchhHHH
Q 003025 713 RDADPGFGSSQAKELLDHLESVLANEPAAVKSGQFIVEVKPQGVSKGVVAEKIFTTMAESGR-HADFVLCIGDDRSDEDM 791 (856)
Q Consensus 713 ~~~dp~~~~~~a~el~~~L~~~l~~~~~~v~~g~~~vEI~p~gvsKG~al~~Ll~~l~~~gi-~~d~vlaiGD~~ND~~M 791 (856)
. .+++ ..+.+.+ ..+.+..+..++||.| ++|||.|++++++++ |+ +++++++|||+.||++|
T Consensus 149 ~-~~~~--------~~~~l~~----~~~~~~~s~~~~ei~~-g~sKg~al~~l~~~~---~~~~~~~viafGD~~NDi~M 211 (249)
T 2zos_A 149 W-SRDG--------WEEVLVE----GGFKVTMGSRFYTVHG-NSDKGKAAKILLDFY---KRLGQIESYAVGDSYNDFPM 211 (249)
T ss_dssp C-SSSC--------HHHHHHH----TTCEEEECSSSEEEEC-SCCHHHHHHHHHHHH---HTTSCEEEEEEECSGGGHHH
T ss_pred c-CCHH--------HHHHHHh----CCEEEEecCCeEEEeC-CCChHHHHHHHHHHh---ccCCCceEEEECCCcccHHH
Confidence 0 0111 1233332 2344555667899999 999999999999998 88 89999999999999999
Q ss_pred HHHccccccCCCCCCCccEEEEEeCCCc-----cccceEcCChh
Q 003025 792 FEIIGNATSSGVLSSNASVFACTVGQKP-----SKAKYYLDDAA 830 (856)
Q Consensus 792 f~~ag~~~~~~~~~~~~~~~av~vG~~~-----s~A~y~l~~~~ 830 (856)
|+.+|. +|+||+.. ..|+|++++++
T Consensus 212 l~~ag~--------------~va~gna~~~~~~~~a~~v~~~~~ 241 (249)
T 2zos_A 212 FEVVDK--------------VFIVGSLKHKKAQNVSSIIDVLEV 241 (249)
T ss_dssp HTTSSE--------------EEEESSCCCTTEEEESSHHHHHHH
T ss_pred HHhCCc--------------EEEeCCCCccccchhceEEecccc
Confidence 999984 67888753 34666665544
|
| >3nb0_A Glycogen [starch] synthase isoform 2; glycogen synthase, glucose-6-phosphate, yeast, allosteric AC transferase; HET: G6P; 2.41A {Saccharomyces cerevisiae} PDB: 3rt1_A* 3nch_A 3naz_A 3o3c_A* 3rsz_A* | Back alignment and structure |
|---|
Probab=99.85 E-value=2.8e-20 Score=216.23 Aligned_cols=310 Identities=14% Similarity=0.134 Sum_probs=198.9
Q ss_pred CEEEEeCcccchHHHHHHhhcCCCeEEEEEccC----C----CChHHHhcCC--------------chHHHH-HHhHhCC
Q 003025 202 DYVWIHDYHLMVLPTFLRRRFTRLRMGFFLHSP----F----PSSEIYRTLP--------------VREEIL-KALLNAD 258 (856)
Q Consensus 202 D~VwihDyhl~llp~~lr~~~~~~~i~~flH~P----f----P~~e~~~~lp--------------~r~eil-~~ll~~d 258 (856)
|++++||+|..++|.+||++.++++..|+.|.- + -..++|..+. ..-.++ .++..||
T Consensus 183 dIiH~HDW~tg~~~~~Lk~~~~~i~tVfTiH~telGR~lagqg~~~~y~~L~~~~~d~ea~~~~i~~~~~~EKaga~~AD 262 (725)
T 3nb0_A 183 IVAHFHEWLAGVALPLCRKRRIDVVTIFTTHATLLGRYLCASGSFDFYNCLESVDVDHEAGRFGIYHRYCIERAAAHSAD 262 (725)
T ss_dssp EEEEEESGGGCTHHHHHHHTTCSCEEEEEESSCHHHHHHTSSSCSCHHHHGGGCCHHHHHHHTTCHHHHHHHHHHHHHSS
T ss_pred cEEEeCchhhhHHHHHHHHhCCCCCEEEEEecchhhhhhhhcCCCchhhhhhhcCCChhhhhhchhHHHHHHHHHHHhCC
Confidence 899999999999999999999999999999964 0 1111122111 011122 2456778
Q ss_pred EEcccCHHHHHHHHHHHHhhhCceecccCceeeEEECCEEEEEEEeecccCchHHHHHhcC----chHHHHHH-HHHHHc
Q 003025 259 LIGFHTFDYARHFLSCCSRMLGLEYQSKRGYIGLEYYGRTVGIKIMPVGIHMGQIESVLRL----ADKDWRVQ-ELKQQF 333 (856)
Q Consensus 259 ligf~t~~~~~~Fl~~~~r~lg~~~~~~~~~~~~~~~gr~~~i~i~p~GId~~~~~~~~~~----~~~~~~~~-~l~~~~ 333 (856)
.|---+..|++.-.. +++.. ...| +|+|||...|.+.... ...+.+++ .+++.+
T Consensus 263 ~ITTVS~~yA~Ei~~----Ll~r~---------------~d~i--IpNGID~~~f~p~~~~~~~k~~aK~klq~~l~~~~ 321 (725)
T 3nb0_A 263 VFTTVSQITAFEAEH----LLKRK---------------PDGI--LPNGLNVIKFQAFHEFQNLHALKKEKINDFVRGHF 321 (725)
T ss_dssp EEEESSHHHHHHHHH----HTSSC---------------CSEE--CCCCBCCCCCSSTTHHHHHHHHHHHHHHHHHHHHT
T ss_pred EEEECCHHHHHHHHH----HhcCC---------------CCEE--EcCCccccccCcchhhHHHHHHHHHHHHHHHHhhc
Confidence 777777666654332 33321 1122 8999999887542100 01111221 223322
Q ss_pred -------CCCeEEEe-ccCcc-ccCCHHHHHHHHHHHHHhC--CCCcCceEEEEEecCCCCCchhH-----HHHHHHHHH
Q 003025 334 -------EGKTVLLG-VDDMD-IFKGVDLKLLAMEHLLKQH--PKWQGRAVLVQIANPARGRGKDL-----EEIQAEIHA 397 (856)
Q Consensus 334 -------~~k~iil~-VdRld-~~KGi~~~l~A~~~ll~~~--p~~~~~vvLvqi~~p~r~~~~~~-----~~l~~~~~~ 397 (856)
.+++++++ ++|++ ..||++.++.|+.++...- .... +-|+..|..|+...+... +.+.+++.+
T Consensus 322 ~~~l~l~~dk~liifivgRle~~nKGiDl~ieAl~~L~~~l~~~~~~-~~vvafii~p~~~~~~~~~~l~~~~~~~~l~~ 400 (725)
T 3nb0_A 322 HGCFDFDLDNTLYFFIAGRYEYKNKGADMFIEALARLNYRLKVSGSK-KTVVAFIVMPAKNNSFTVEALKGQAEVRALEN 400 (725)
T ss_dssp TTCCCSCGGGEEEEEEESSCCTTTTTHHHHHHHHHHHHHHHHHTTCC-CEEEEEEECCCCEEEECHHHHHHHHHHHHHHH
T ss_pred ccCCCCCCCceeEEEEEEEeccccCCHHHHHHHHHHHHHHHhhccCC-CcEEEEEEeCCCCCCCchhhhcchhHHHHHHH
Confidence 14666666 79999 5799999999999987541 1112 233333444554433221 111111222
Q ss_pred HHHH----------------------------------------------------------------------------
Q 003025 398 TCKR---------------------------------------------------------------------------- 401 (856)
Q Consensus 398 lv~~---------------------------------------------------------------------------- 401 (856)
.+..
T Consensus 401 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~l~~~~~~~lkr~~~~~~~~~~~lpp~~TH~~~~~~~D~Il~~~r 480 (725)
T 3nb0_A 401 TVHEVTTSIGKRIFDHAIRYPHNGLTTELPTDLGELLKSSDKVMLKRRILALRRPEGQLPPIVTHNMVDDANDLILNKIR 480 (725)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTSTTCCSSSCCCHHHHCCHHHHHHHHHHHHHHCCCTTCCCCSBSEEETTGGGCHHHHHHH
T ss_pred HHHHHHHHHhHHHHHHHhcccccccCCCCCCCHHHhcChHHHHHHHHHHHhhccCCCCCCCeeeeecccCCccHHHHHHH
Confidence 2211
Q ss_pred -HhcccCCCCcccEEEEcCCCCHH------HHHHHHHhcceeeeccccccCCCcccceeeeecCCCCCCCCCCCCCCCCc
Q 003025 402 -INETFGRPGYEPVVFIDKPVTLS------ERAAYYTIAECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKS 474 (856)
Q Consensus 402 -IN~~~~~~~~~pvv~~~~~v~~~------el~aly~~ADv~vvtS~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~g 474 (856)
++-.=...+-..|+++.+.++.. ++..+|+.||+||+||.+||||++++|||||+ .
T Consensus 481 ~l~L~N~~~drVKVIf~P~~L~~~d~lf~~d~~~~~~~advfV~PS~~EgfGl~~LEAmA~G-----------------~ 543 (725)
T 3nb0_A 481 QVQLFNSPSDRVKMIFHPEFLNANNPILGLDYDEFVRGCHLGVFPSYYEPWGYTPAECTVMG-----------------V 543 (725)
T ss_dssp HHTCCCCTTCSEEEEECCSCCCTTCSSSCCCHHHHHHHCSEEECCCSSBSSCHHHHHHHHTT-----------------C
T ss_pred hcCCCCCcCCceeEEEeccccCCCCccchhHHHHHHhhceEEEeccccCCCCHHHHHHHHcC-----------------C
Confidence 11111112234577778888876 58999999999999999999999999999994 4
Q ss_pred eEEecCCcccccccC----------Cceee---CCCCHHHHHHHHHHHH----cCCHHHHHHHHHHHhhhhhcCCHHHHH
Q 003025 475 MLVVSEFIGCSPSLS----------GAIRV---NPWNIEATAEAMHEAI----QMNEAEKQLRHEKHYRYVSTHDVAYWA 537 (856)
Q Consensus 475 ~lV~Se~~G~~~~l~----------~al~V---nP~d~~~~A~ai~~aL----~m~~~er~~r~~~~~~~v~~~~~~~W~ 537 (856)
|+|+|+.+|+.+.+. .|++| +|.|+++++++|.++| .+++.++..+.++.++....++|..-+
T Consensus 544 PvI~s~~gG~~d~V~dg~~~~~~~~tG~lV~~rd~~d~ee~aeaLa~aL~~f~~~d~~~r~~mr~~ar~~A~~FSWe~iA 623 (725)
T 3nb0_A 544 PSITTNVSGFGSYMEDLIETNQAKDYGIYIVDRRFKAPDESVEQLVDYMEEFVKKTRRQRINQRNATEALSDLLDWKRMG 623 (725)
T ss_dssp CEEEETTBHHHHHHHTTSCHHHHHHTTEEEECCSSSCHHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHGGGGGBHHHHH
T ss_pred CEEEeCCCChhhhhhccccccCCCCceEEEeCCCCCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhCCHHHHH
Confidence 999999999987762 37888 4567777777776666 467777766666677777889999999
Q ss_pred HHHHHHHHHHHHh
Q 003025 538 RSFFQDMERTCKD 550 (856)
Q Consensus 538 ~~~l~~l~~~~~~ 550 (856)
+.+++..+++...
T Consensus 624 ~~Yl~~Ye~aL~~ 636 (725)
T 3nb0_A 624 LEYVKARQLALRR 636 (725)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhh
Confidence 9998877776644
|
| >3zx4_A MPGP, mannosyl-3-phosphoglycerate phosphatase; hydrolase, haloalkanoid acid dehalogenase-like phosphatase, crystallographic snapshot; HET: 2M8; 1.74A {Thermus thermophilus} PDB: 3zty_A 3zu6_A* 3ztw_A* 3zw7_A* 3zwd_A* 3zwk_A 3zup_A* 3zx5_A* | Back alignment and structure |
|---|
Probab=99.85 E-value=1.5e-21 Score=207.25 Aligned_cols=219 Identities=13% Similarity=0.110 Sum_probs=141.3
Q ss_pred EEEEecCCCCCCCCCCCCCCCHHHHHHHHHHHhhCCCeEEEecCCChhhHHHhhcCCCCccEEeeCCEEEEeCCCc----
Q 003025 593 AILFDYDGTVMPQTSINKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSPCKKLGIAAEHGYFMRWSADE---- 668 (856)
Q Consensus 593 lI~~DlDGTLl~~~~~~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~~~~lgliaenG~~I~~~~~~---- 668 (856)
+|+||+||||++ +. .+++++.++|++| +++|+.|+++|||+...+. .++ + ..+++++||+.+..++..
T Consensus 2 li~~DlDGTLl~---~~-~i~~~~~~al~~l-~~~Gi~v~iaTGR~~~~~~-~l~-~-~~~~i~~nGa~i~~~~~~~~~~ 73 (259)
T 3zx4_A 2 IVFTDLDGTLLD---ER-GELGPAREALERL-RALGVPVVPVTAKTRKEVE-ALG-L-EPPFIVENGGGLYLPRDWPVRA 73 (259)
T ss_dssp EEEECCCCCCSC---SS-SSCSTTHHHHHHH-HHTTCCEEEBCSSCHHHHH-HTT-C-CSSEEEGGGTEEEEETTCSSCC
T ss_pred EEEEeCCCCCcC---CC-cCCHHHHHHHHHH-HHCCCeEEEEeCCCHHHHH-HcC-C-CCcEEEECCcEEEeCCCCcccc
Confidence 799999999999 77 8999999999997 7889999999999999998 432 1 356899999999877553
Q ss_pred ------ceEecCCCCcccHHHHHHHHHHHHhhcCC---cceEEe------cccceEEeee--cCCCCC------CchhHH
Q 003025 669 ------EWQNCGQSVDFGWIQIAEPVMKLYTESTD---GSYIEI------KESALVWHHR--DADPGF------GSSQAK 725 (856)
Q Consensus 669 ------~w~~~~~~~~~~w~~~v~~i~~~~~~~~~---Gs~ie~------k~~~l~~~~~--~~dp~~------~~~~a~ 725 (856)
.+.... ... .+.+.++++.+.+... ..+... ....+..... .....+ ......
T Consensus 74 ~~~~~~~~~~~~-~~~---~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (259)
T 3zx4_A 74 GRPKGGYRVVSL-AWP---YRKVRARLREAEALAGRPILGYGDLTAEAVARLTGLSREAARRAKAREYDETLVLCPEEVE 149 (259)
T ss_dssp SEEETTEEEEEC-SCC---HHHHHHHHHHHHHHHTSCCCBGGGBCHHHHHHHHCCCHHHHHHHTCCSSCEEBCCCTTTHH
T ss_pred cccCCceEEEEc-CCC---HHHHHHHHHHHHHhcCceEEEcCCCCHHHHHHHcCCCHHHhhhhhccccceeEEeCcHHHH
Confidence 111111 111 1222233322221000 000000 0000000000 000000 000234
Q ss_pred HHHHHHHHHhcCCCeEEEEcCeEEEEEeCCCCHHHHHHHHHHHhhhcCCCc--ceEEEEeCCchhHHHHHHccccccCCC
Q 003025 726 ELLDHLESVLANEPAAVKSGQFIVEVKPQGVSKGVVAEKIFTTMAESGRHA--DFVLCIGDDRSDEDMFEIIGNATSSGV 803 (856)
Q Consensus 726 el~~~L~~~l~~~~~~v~~g~~~vEI~p~gvsKG~al~~Ll~~l~~~gi~~--d~vlaiGD~~ND~~Mf~~ag~~~~~~~ 803 (856)
++.+.+.+ ..+.+..+..++|+.|. ++||.+++++++++ |+++ +++++|||+.||++||+.+|.
T Consensus 150 ~~~~~l~~----~~~~~~~s~~~~ei~~~-~~K~~~l~~l~~~~---~i~~~~~~~~~~GD~~nD~~m~~~ag~------ 215 (259)
T 3zx4_A 150 AVLEALEA----VGLEWTHGGRFYHAAKG-ADKGRAVARLRALW---PDPEEARFAVGLGDSLNDLPLFRAVDL------ 215 (259)
T ss_dssp HHHHHHHH----TTCEEEECSSSEEEESS-CCHHHHHHHHHHTC---SSHHHHTSEEEEESSGGGHHHHHTSSE------
T ss_pred HHHHHHHH----CCcEEEecCceEEEcCC-CCHHHHHHHHHHHh---CCCCCCceEEEEeCCHHHHHHHHhCCC------
Confidence 44444443 23555556667899999 99999999999999 9998 999999999999999999985
Q ss_pred CCCCccEEEEEeCCCc-cccceEcC--ChhHHHHHHHHHHHhcCC
Q 003025 804 LSSNASVFACTVGQKP-SKAKYYLD--DAAEVVTMLEALAEASAP 845 (856)
Q Consensus 804 ~~~~~~~~av~vG~~~-s~A~y~l~--~~~eV~~~L~~L~~~~~~ 845 (856)
+|+|||+. -.|.|++. +.++|.++|+.+......
T Consensus 216 --------~va~~na~~~~~~~~~~~~~~~gv~~~~~~~~~~~~~ 252 (259)
T 3zx4_A 216 --------AVYVGRGDPPEGVLATPAPGPEGFRYAVERYLLPRLS 252 (259)
T ss_dssp --------EEECSSSCCCTTCEECSSCHHHHHHHHHHHHTTTC--
T ss_pred --------eEEeCChhhcCCcEEeCCCCchHHHHHHHHHHHhCcC
Confidence 67777642 45556664 468899999999865443
|
| >2bfw_A GLGA glycogen synthase; glycosyltransferase family 5 UDP/ADP-glucose-glycogen syntha rossman folds, transferase; 1.8A {Pyrococcus abyssi} SCOP: c.87.1.8 | Back alignment and structure |
|---|
Probab=99.81 E-value=1.8e-19 Score=182.49 Aligned_cols=188 Identities=18% Similarity=0.213 Sum_probs=146.3
Q ss_pred eecccCchHHH--HHhcCchHHHHHHHHHHHc--CCCeEEEeccCcc-ccCCHHHHHHHHHHHH--HhCCCCcCceEEEE
Q 003025 304 MPVGIHMGQIE--SVLRLADKDWRVQELKQQF--EGKTVLLGVDDMD-IFKGVDLKLLAMEHLL--KQHPKWQGRAVLVQ 376 (856)
Q Consensus 304 ~p~GId~~~~~--~~~~~~~~~~~~~~l~~~~--~~k~iil~VdRld-~~KGi~~~l~A~~~ll--~~~p~~~~~vvLvq 376 (856)
+|+|||.+.|. +. .....+....+++++ .++++|+++||+. +.||+..+++|+..+. +++|+++ |+.
T Consensus 2 ipngvd~~~f~~~~~--~~~~~~~~~~~r~~~~~~~~~~i~~~G~~~~~~K~~~~li~a~~~l~~~~~~~~~~----l~i 75 (200)
T 2bfw_A 2 SHNGIDCSFWNESYL--TGSRDERKKSLLSKFGMDEGVTFMFIGRFDRGQKGVDVLLKAIEILSSKKEFQEMR----FII 75 (200)
T ss_dssp ---CCCTTTSSGGGS--CSCHHHHHHHHHHHTTCCSCEEEEEESCBCSSSSCHHHHHHHHHHHTTSGGGGGEE----EEE
T ss_pred CCCccChhhcccccc--ccchhhHHHHHHHHcCCCCCCEEEEeeccccccCCHHHHHHHHHHHHhhccCCCeE----EEE
Confidence 58999999886 32 111222345567776 3677999999999 9999999999999997 7777654 777
Q ss_pred EecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCcccEEEEcCCCCHHHHHHHHHhcceeeeccccccCCCcccceeeee
Q 003025 377 IANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDKPVTLSERAAYYTIAECVVVTAVRDGMNLTPYEYIVCR 456 (856)
Q Consensus 377 i~~p~r~~~~~~~~l~~~~~~lv~~IN~~~~~~~~~pvv~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~a~~ 456 (856)
+|. ++ .+..+++++++.+.+ .|+++.+.++.+++..+|+.||++|+||..||||++++|||+|+
T Consensus 76 ~G~-----~~--~~~~~~l~~~~~~~~---------~v~~~~g~~~~~~~~~~~~~ad~~l~ps~~e~~~~~~~Ea~a~G 139 (200)
T 2bfw_A 76 IGK-----GD--PELEGWARSLEEKHG---------NVKVITEMLSREFVRELYGSVDFVIIPSYFEPFGLVALEAMCLG 139 (200)
T ss_dssp ECC-----BC--HHHHHHHHHHHHHCT---------TEEEECSCCCHHHHHHHHTTCSEEEECCSCCSSCHHHHHHHHTT
T ss_pred ECC-----CC--hHHHHHHHHHHHhcC---------CEEEEeccCCHHHHHHHHHHCCEEEECCCCCCccHHHHHHHHCC
Confidence 774 22 123455555555543 25544889999999999999999999999999999999999995
Q ss_pred cCCCCCCCCCCCCCCCCceEEecCCccccccc--CCceeeCCCCHHHHHHHHHHHHcCCHHHHHHHHHHHhhhhhc
Q 003025 457 QGVSGSESSSESSAPKKSMLVVSEFIGCSPSL--SGAIRVNPWNIEATAEAMHEAIQMNEAEKQLRHEKHYRYVST 530 (856)
Q Consensus 457 ~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l--~~al~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~ 530 (856)
. |+|+|..+|..+.+ ..|++++|.|+++++++|.++++|++++++...++.++++.+
T Consensus 140 ~-----------------PvI~~~~~~~~e~~~~~~g~~~~~~~~~~l~~~i~~l~~~~~~~~~~~~~~a~~~~~~ 198 (200)
T 2bfw_A 140 A-----------------IPIASAVGGLRDIITNETGILVKAGDPGELANAILKALELSRSDLSKFRENCKKRAMS 198 (200)
T ss_dssp C-----------------EEEEESCHHHHHHCCTTTCEEECTTCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
T ss_pred C-----------------CEEEeCCCChHHHcCCCceEEecCCCHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHh
Confidence 4 99999999988888 248999999999999999999997777777777777776654
|
| >2iuy_A Avigt4, glycosyltransferase; antibiotics, family GT-4, avilamycin A; HET: MES; 2.1A {Streptomyces viridochromogenes} PDB: 2iv3_A* | Back alignment and structure |
|---|
Probab=99.80 E-value=5.2e-20 Score=202.56 Aligned_cols=244 Identities=12% Similarity=-0.014 Sum_probs=181.3
Q ss_pred HHHHHcCCCCCEEEEeCcccchHHHHHHhhcCCCeEEEEEccCCCChHHHhcCCchHHHHHHhHhCCEEcccCHHHHHHH
Q 003025 192 RVIEVINPEDDYVWIHDYHLMVLPTFLRRRFTRLRMGFFLHSPFPSSEIYRTLPVREEILKALLNADLIGFHTFDYARHF 271 (856)
Q Consensus 192 ~i~~~~~~~~D~VwihDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~~~~lp~r~eil~~ll~~dligf~t~~~~~~F 271 (856)
++++..++ |+|++|.++...+. .+..+.| .+.+|..++.+. .+|.|-+.+....+.+
T Consensus 78 ~~l~~~~~--Dvi~~~~~~~~~~~----~~~~~~p-v~~~h~~~~~~~----------------~~d~ii~~S~~~~~~~ 134 (342)
T 2iuy_A 78 RWLRTADV--DVVHDHSGGVIGPA----GLPPGTA-FISSHHFTTRPV----------------NPVGCTYSSRAQRAHC 134 (342)
T ss_dssp HHHHHCCC--SEEEECSSSSSCST----TCCTTCE-EEEEECSSSBCS----------------CCTTEEESCHHHHHHT
T ss_pred HHHHhcCC--CEEEECCchhhHHH----HhhcCCC-EEEecCCCCCcc----------------cceEEEEcCHHHHHHH
Confidence 34455566 99999998865443 3455788 999999887431 1888887776544433
Q ss_pred HHHHHhhhCceecccCceeeEEECCEEEEEEEeecccCchHHHHHhcCchHHHHHHHHHHHcCCCeEEEeccCccccCCH
Q 003025 272 LSCCSRMLGLEYQSKRGYIGLEYYGRTVGIKIMPVGIHMGQIESVLRLADKDWRVQELKQQFEGKTVLLGVDDMDIFKGV 351 (856)
Q Consensus 272 l~~~~r~lg~~~~~~~~~~~~~~~gr~~~i~i~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~k~iil~VdRld~~KGi 351 (856)
.+ ..++.++|+|||...|.+... ...++++|+++||+.+.||+
T Consensus 135 ~~------------------------~~~~~vi~ngvd~~~~~~~~~-------------~~~~~~~i~~vG~~~~~Kg~ 177 (342)
T 2iuy_A 135 GG------------------------GDDAPVIPIPVDPARYRSAAD-------------QVAKEDFLLFMGRVSPHKGA 177 (342)
T ss_dssp TC------------------------CTTSCBCCCCBCGGGSCCSTT-------------CCCCCSCEEEESCCCGGGTH
T ss_pred hc------------------------CCceEEEcCCCChhhcCcccc-------------cCCCCCEEEEEeccccccCH
Confidence 21 012456899999887643211 12356789999999999999
Q ss_pred HHHHHHHHHHHHhCCCCcCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCcccEEEEcCCCCHHHHHHHHH
Q 003025 352 DLKLLAMEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDKPVTLSERAAYYT 431 (856)
Q Consensus 352 ~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~~~~lv~~IN~~~~~~~~~pvv~~~~~v~~~el~aly~ 431 (856)
..+++|++++ + +.|+.+|. ++..+ ++++++++.+ +.+.+.|.++.+|+..+|+
T Consensus 178 ~~li~a~~~~-----~----~~l~i~G~-----g~~~~----~l~~~~~~~~---------~~v~~~g~~~~~~l~~~~~ 230 (342)
T 2iuy_A 178 LEAAAFAHAC-----G----RRLVLAGP-----AWEPE----YFDEITRRYG---------STVEPIGEVGGERRLDLLA 230 (342)
T ss_dssp HHHHHHHHHH-----T----CCEEEESC-----CCCHH----HHHHHHHHHT---------TTEEECCCCCHHHHHHHHH
T ss_pred HHHHHHHHhc-----C----cEEEEEeC-----cccHH----HHHHHHHHhC---------CCEEEeccCCHHHHHHHHH
Confidence 9999999886 3 44777764 33333 3334444433 1345688999999999999
Q ss_pred hcceeeeccc----------cccCCCcccceeeeecCCCCCCCCCCCCCCCCceEEecCCccccccc-C----CceeeCC
Q 003025 432 IAECVVVTAV----------RDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIGCSPSL-S----GAIRVNP 496 (856)
Q Consensus 432 ~ADv~vvtS~----------~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l-~----~al~VnP 496 (856)
.||++|+||. .||||++++|||+|+. |+|+|+.+|..+.+ . .|++++|
T Consensus 231 ~adv~v~ps~~~~~~~~~~~~E~~~~~~~EAma~G~-----------------PvI~s~~~~~~e~~~~~~~~~g~~~~~ 293 (342)
T 2iuy_A 231 SAHAVLAMSQAVTGPWGGIWCEPGATVVSEAAVSGT-----------------PVVGTGNGCLAEIVPSVGEVVGYGTDF 293 (342)
T ss_dssp HCSEEEECCCCCCCTTCSCCCCCCCHHHHHHHHTTC-----------------CEEECCTTTHHHHGGGGEEECCSSSCC
T ss_pred hCCEEEECCcccccccccccccCccHHHHHHHhcCC-----------------CEEEcCCCChHHHhcccCCCceEEcCC
Confidence 9999999999 8999999999999954 99999999998888 3 4899999
Q ss_pred CCHHHHHHHHHHHHcCCHHHHHHHHHHHhhhh-hcCCHHHHHHHHHHHHHHHHH
Q 003025 497 WNIEATAEAMHEAIQMNEAEKQLRHEKHYRYV-STHDVAYWARSFFQDMERTCK 549 (856)
Q Consensus 497 ~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v-~~~~~~~W~~~~l~~l~~~~~ 549 (856)
|++++|++|.++++ .++.++++ ..+++...++++++-++++.+
T Consensus 294 -d~~~l~~~i~~l~~---------~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~ 337 (342)
T 2iuy_A 294 -APDEARRTLAGLPA---------SDEVRRAAVRLWGHVTIAERYVEQYRRLLA 337 (342)
T ss_dssp -CHHHHHHHHHTSCC---------HHHHHHHHHHHHBHHHHHHHHHHHHHHHHT
T ss_pred -CHHHHHHHHHHHHH---------HHHHHHHHHHhcCHHHHHHHHHHHHHHHHc
Confidence 99999999999987 22334445 668889999999888887654
|
| >2iw1_A Lipopolysaccharide core biosynthesis protein RFAG; transferase, lipopolysaccharide biosynthesis, family GT-4, glycosyltransferase, LPS; HET: U2F; 1.5A {Escherichia coli} SCOP: c.87.1.8 PDB: 2iv7_A* | Back alignment and structure |
|---|
Probab=99.78 E-value=2.2e-20 Score=207.26 Aligned_cols=227 Identities=15% Similarity=0.159 Sum_probs=170.4
Q ss_pred hCCEEcccCHHHHHHHHHHHHhhhCceecccCceeeEEECCEEEEEEEeecccCchHHHHHhcCchHHHHHHHHHHHc--
Q 003025 256 NADLIGFHTFDYARHFLSCCSRMLGLEYQSKRGYIGLEYYGRTVGIKIMPVGIHMGQIESVLRLADKDWRVQELKQQF-- 333 (856)
Q Consensus 256 ~~dligf~t~~~~~~Fl~~~~r~lg~~~~~~~~~~~~~~~gr~~~i~i~p~GId~~~~~~~~~~~~~~~~~~~l~~~~-- 333 (856)
.+|.|-+.+....+.|.+. +|.. ..++.++|+|||...|.+....+ ....+++++
T Consensus 136 ~~d~ii~~s~~~~~~~~~~----~~~~---------------~~~~~vi~ngv~~~~~~~~~~~~----~~~~~~~~~~~ 192 (374)
T 2iw1_A 136 KSTKLMMLTDKQIADFQKH----YQTE---------------PERFQILPPGIYPDRKYSEQIPN----SREIYRQKNGI 192 (374)
T ss_dssp CCCEEEESCHHHHHHHHHH----HCCC---------------GGGEEECCCCCCGGGSGGGSCTT----HHHHHHHHTTC
T ss_pred CCcEEEEcCHHHHHHHHHH----hCCC---------------hhheEEecCCcCHHhcCcccchh----HHHHHHHHhCC
Confidence 4899988887776666542 2321 12356789999998876432211 223456665
Q ss_pred -CCCeEEEeccCccccCCHHHHHHHHHHHHHh-CCCCcCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCc
Q 003025 334 -EGKTVLLGVDDMDIFKGVDLKLLAMEHLLKQ-HPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGY 411 (856)
Q Consensus 334 -~~k~iil~VdRld~~KGi~~~l~A~~~ll~~-~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~~~~lv~~IN~~~~~~~~ 411 (856)
.++++|+++||+.+.||+..+++|++.+.++ +|+ +.|+.+|.+. . +++ ++++++.+ .
T Consensus 193 ~~~~~~i~~~G~~~~~K~~~~li~a~~~l~~~~~~~----~~l~i~G~g~-----~-~~~----~~~~~~~~-------~ 251 (374)
T 2iw1_A 193 KEQQNLLLQVGSDFGRKGVDRSIEALASLPESLRHN----TLLFVVGQDK-----P-RKF----EALAEKLG-------V 251 (374)
T ss_dssp CTTCEEEEEECSCTTTTTHHHHHHHHHTSCHHHHHT----EEEEEESSSC-----C-HHH----HHHHHHHT-------C
T ss_pred CCCCeEEEEeccchhhcCHHHHHHHHHHhHhccCCc----eEEEEEcCCC-----H-HHH----HHHHHHcC-------C
Confidence 4678999999999999999999999988776 455 4588887532 1 233 33444332 2
Q ss_pred ccEEEEcCCCCHHHHHHHHHhcceeeeccccccCCCcccceeeeecCCCCCCCCCCCCCCCCceEEecCCccccccc---
Q 003025 412 EPVVFIDKPVTLSERAAYYTIAECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIGCSPSL--- 488 (856)
Q Consensus 412 ~pvv~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l--- 488 (856)
.+.+.+.+. .+++..+|+.||++|+||..||||++++|||+|+. |+|+|..+|..+.+
T Consensus 252 ~~~v~~~g~--~~~~~~~~~~ad~~v~ps~~e~~~~~~~Ea~a~G~-----------------Pvi~~~~~~~~e~i~~~ 312 (374)
T 2iw1_A 252 RSNVHFFSG--RNDVSELMAAADLLLHPAYQEAAGIVLLEAITAGL-----------------PVLTTAVCGYAHYIADA 312 (374)
T ss_dssp GGGEEEESC--CSCHHHHHHHCSEEEECCSCCSSCHHHHHHHHHTC-----------------CEEEETTSTTTHHHHHH
T ss_pred CCcEEECCC--cccHHHHHHhcCEEEeccccCCcccHHHHHHHCCC-----------------CEEEecCCCchhhhccC
Confidence 223334454 47899999999999999999999999999999954 99999999999888
Q ss_pred CCceeeC-CCCHHHHHHHHHHHHcCCHHHHHHHHHHHhhhhhcCCHHHHHHHHHHHHHH
Q 003025 489 SGAIRVN-PWNIEATAEAMHEAIQMNEAEKQLRHEKHYRYVSTHDVAYWARSFFQDMER 546 (856)
Q Consensus 489 ~~al~Vn-P~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~l~~ 546 (856)
..|++++ |.|++++|++|.++++ +++.++...++.++++.++++..|++.+.+-++.
T Consensus 313 ~~g~~~~~~~~~~~l~~~i~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 370 (374)
T 2iw1_A 313 NCGTVIAEPFSQEQLNEVLRKALT-QSPLRMAWAENARHYADTQDLYSLPEKAADIITG 370 (374)
T ss_dssp TCEEEECSSCCHHHHHHHHHHHHH-CHHHHHHHHHHHHHHHHHSCCSCHHHHHHHHHHC
T ss_pred CceEEeCCCCCHHHHHHHHHHHHc-ChHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 3589997 9999999999999998 5566667777788899999888999888776653
|
| >3gyg_A NTD biosynthesis operon putative hydrolase NTDB; PF05116, PF08282, MCSG, PSI-2, haloacid dehalogenase-like HY structural genomics; 2.45A {Bacillus subtilis subsp} | Back alignment and structure |
|---|
Probab=99.78 E-value=2.8e-18 Score=184.83 Aligned_cols=226 Identities=15% Similarity=0.160 Sum_probs=152.6
Q ss_pred CCcEEEEEecCCCCCCCCCCCCCCCHHHHHHHHH-------HHhhCCCeEEEecCCChhhHHHhhcCCC----CccEEee
Q 003025 589 SKSRAILFDYDGTVMPQTSINKAPSQAVISIINT-------LCNDARNTVFVVSGRGRDCLGKWFSPCK----KLGIAAE 657 (856)
Q Consensus 589 s~~rlI~~DlDGTLl~~~~~~~~~s~~~~~aL~~-------L~~d~g~~V~I~TGR~~~~l~~~~~~~~----~lgliae 657 (856)
.++|+|+||+||||++ +. +++.+..++.+ ++.++|+.++++|||+...+..++..+. ...+++.
T Consensus 20 ~~~kliifDlDGTLld---s~--i~~~~~~~l~~~~~~l~~~~~~~g~~~~~~tGr~~~~~~~~~~~~g~~~~~~~~i~~ 94 (289)
T 3gyg_A 20 HPQYIVFCDFDETYFP---HT--IDEQKQQDIYELEDYLEQKSKDGELIIGWVTGSSIESILDKMGRGKFRYFPHFIASD 94 (289)
T ss_dssp SCSEEEEEETBTTTBC---SS--CCHHHHHHHHHHHHHHHHHHHTTCEEEEEECSSCHHHHHHHHHHTTCCBCCSEEEET
T ss_pred CCCeEEEEECCCCCcC---CC--CCcchHHHHHHHHHHHHHHHhcCCcEEEEEcCCCHHHHHHHHHhhccCCCCCeEeec
Confidence 4689999999999999 54 77777777773 4578999999999999999988875431 1236777
Q ss_pred CCEEEEe---CCCcc----eEecCCCCcccHHHHHHHHHHHHhhcC-----CcceEEecccceEEeeecCCCCCCchhHH
Q 003025 658 HGYFMRW---SADEE----WQNCGQSVDFGWIQIAEPVMKLYTEST-----DGSYIEIKESALVWHHRDADPGFGSSQAK 725 (856)
Q Consensus 658 nG~~I~~---~~~~~----w~~~~~~~~~~w~~~v~~i~~~~~~~~-----~Gs~ie~k~~~l~~~~~~~dp~~~~~~a~ 725 (856)
+|..+.. +|... |....... ...+.+.++++.+.+.. ..+..+.+...+.++|+..++.. ..
T Consensus 95 ~g~~i~~~~~ng~~~~~~~~~~~~~~~--~~~~~v~e~l~~l~~~~g~~l~~~t~~~~~~~~~~~~~~~~~~~~----~~ 168 (289)
T 3gyg_A 95 LGTEITYFSEHNFGQQDNKWNSRINEG--FSKEKVEKLVKQLHENHNILLNPQTQLGKSRYKHNFYYQEQDEIN----DK 168 (289)
T ss_dssp TTTEEEECCSSSTTEECHHHHHHHHTT--CCHHHHHHHHHHHHHHSSCCCEEGGGTCGGGTTCCEEEECCCHHH----HH
T ss_pred CCceEEEEcCCCcEeecCchhhhhccc--CCHHHHHHHHHHHHhhhCceeeecccccccceEEEEEEecccccc----ch
Confidence 7777666 33322 11111111 12345556666554431 11222334455667776653311 11
Q ss_pred HHHHHHHHHhcCCC--eEEEE---------cCeEEEEEeCCCCHHHHHHHHHHHhhhcCCCcceEEEEeCCchhHHHHHH
Q 003025 726 ELLDHLESVLANEP--AAVKS---------GQFIVEVKPQGVSKGVVAEKIFTTMAESGRHADFVLCIGDDRSDEDMFEI 794 (856)
Q Consensus 726 el~~~L~~~l~~~~--~~v~~---------g~~~vEI~p~gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ 794 (856)
+....+...+...+ ..+.. +..++|+.|.+.+|+.+++++++++ |++++++++|||+.||++|++.
T Consensus 169 ~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~---~~~~~~~~~~GDs~~D~~~~~~ 245 (289)
T 3gyg_A 169 KNLLAIEKICEEYGVSVNINRCNPLAGDPEDSYDVDFIPIGTGKNEIVTFMLEKY---NLNTERAIAFGDSGNDVRMLQT 245 (289)
T ss_dssp HHHHHHHHHHHHHTEEEEEEECCGGGTCCTTEEEEEEEESCCSHHHHHHHHHHHH---TCCGGGEEEEECSGGGHHHHTT
T ss_pred HHHHHHHHHHHHcCCCEEEEEccccccCCCCceEEEEEeCCCCHHHHHHHHHHHc---CCChhhEEEEcCCHHHHHHHHh
Confidence 22233333333222 22322 2378999999999999999999999 9999999999999999999999
Q ss_pred ccccccCCCCCCCccEEEEEeCCC----ccccceEcCCh--hHHHHHHHHHHHh
Q 003025 795 IGNATSSGVLSSNASVFACTVGQK----PSKAKYYLDDA--AEVVTMLEALAEA 842 (856)
Q Consensus 795 ag~~~~~~~~~~~~~~~av~vG~~----~s~A~y~l~~~--~eV~~~L~~L~~~ 842 (856)
+|. +|++|+. +..|+|++.++ ++|++.|+++...
T Consensus 246 ag~--------------~~~~~~~~~~~~~~a~~v~~~~~~~gv~~~~~~~~~~ 285 (289)
T 3gyg_A 246 VGN--------------GYLLKNATQEAKNLHNLITDSEYSKGITNTLKKLIGF 285 (289)
T ss_dssp SSE--------------EEECTTCCHHHHHHCCCBCSSCHHHHHHHHHHHHTCC
T ss_pred CCc--------------EEEECCccHHHHHhCCEEcCCCCcCHHHHHHHHHHHH
Confidence 984 6888875 36688888654 5699999988753
|
| >3qhp_A Type 1 capsular polysaccharide biosynthesis prote (CAPJ); rossmann fold, glycosyltransferase, transferase; 1.50A {Helicobacter pylori} | Back alignment and structure |
|---|
Probab=99.74 E-value=8.9e-18 Score=164.89 Aligned_cols=161 Identities=12% Similarity=0.031 Sum_probs=121.5
Q ss_pred CeEEEeccCccccCCHHHHHHHHHHHHHhCCCCcCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCcccEE
Q 003025 336 KTVLLGVDDMDIFKGVDLKLLAMEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVV 415 (856)
Q Consensus 336 k~iil~VdRld~~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~~~~lv~~IN~~~~~~~~~pvv 415 (856)
+.+|+++||+.+.||+..+++|+.++ +++|+ +.|+.+|. ++..+++++. +.+.+. .+
T Consensus 2 ~~~i~~~G~~~~~Kg~~~li~a~~~l-~~~~~----~~l~i~G~-----g~~~~~~~~~----~~~~~~---------~v 58 (166)
T 3qhp_A 2 PFKIAMVGRYSNEKNQSVLIKAVALS-KYKQD----IVLLLKGK-----GPDEKKIKLL----AQKLGV---------KA 58 (166)
T ss_dssp CEEEEEESCCSTTTTHHHHHHHHHTC-TTGGG----EEEEEECC-----STTHHHHHHH----HHHHTC---------EE
T ss_pred ceEEEEEeccchhcCHHHHHHHHHHh-ccCCC----eEEEEEeC-----CccHHHHHHH----HHHcCC---------eE
Confidence 56899999999999999999999987 44454 55887774 3444444444 433321 34
Q ss_pred EEcCCCCHHHHHHHHHhcceeeeccccccCCCcccceeeeecCCCCCCCCCCCCCCCCc-eEEecC-Cccccccc-CCce
Q 003025 416 FIDKPVTLSERAAYYTIAECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKS-MLVVSE-FIGCSPSL-SGAI 492 (856)
Q Consensus 416 ~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~g-~lV~Se-~~G~~~~l-~~al 492 (856)
.+ +.++.+++..+|+.||++|+||..||||++++|||+| +. |+|++. .+|..+.+ .++.
T Consensus 59 ~~-g~~~~~~~~~~~~~adv~v~ps~~e~~~~~~~Eama~-----------------G~vPvi~~~~~~~~~~~~~~~~~ 120 (166)
T 3qhp_A 59 EF-GFVNSNELLEILKTCTLYVHAANVESEAIACLEAISV-----------------GIVPVIANSPLSATRQFALDERS 120 (166)
T ss_dssp EC-CCCCHHHHHHHHTTCSEEEECCCSCCCCHHHHHHHHT-----------------TCCEEEECCTTCGGGGGCSSGGG
T ss_pred EE-eecCHHHHHHHHHhCCEEEECCcccCccHHHHHHHhc-----------------CCCcEEeeCCCCchhhhccCCce
Confidence 55 8999999999999999999999999999999999999 44 888844 55556665 4577
Q ss_pred eeCCCCHHHHHHHHHHHHcCCHHHHHHHHHHHhhhhhcCCHHHHHH
Q 003025 493 RVNPWNIEATAEAMHEAIQMNEAEKQLRHEKHYRYVSTHDVAYWAR 538 (856)
Q Consensus 493 ~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~ 538 (856)
+++|.|+++++++|.++++ +++.++...++.++++..+++..+++
T Consensus 121 ~~~~~~~~~l~~~i~~l~~-~~~~~~~~~~~~~~~~~~~s~~~~~~ 165 (166)
T 3qhp_A 121 LFEPNNAKDLSAKIDWWLE-NKLERERMQNEYAKSALNYTLENSVI 165 (166)
T ss_dssp EECTTCHHHHHHHHHHHHH-CHHHHHHHHHHHHHHHHHHC------
T ss_pred EEcCCCHHHHHHHHHHHHh-CHHHHHHHHHHHHHHHHHCChhhhhc
Confidence 9999999999999999998 55666666667777777777766554
|
| >1vgv_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, isomerase; HET: UD1; 2.31A {Escherichia coli} SCOP: c.87.1.3 PDB: 1f6d_A* | Back alignment and structure |
|---|
Probab=99.68 E-value=5.2e-16 Score=173.08 Aligned_cols=280 Identities=15% Similarity=0.102 Sum_probs=175.2
Q ss_pred HHHHHcCCCCCEEEEeCcccchHHHHHHhhcCCCeEEEEEccCCCChHHHhcCCchHHHHHHh-H-hCCEEcccCHHHHH
Q 003025 192 RVIEVINPEDDYVWIHDYHLMVLPTFLRRRFTRLRMGFFLHSPFPSSEIYRTLPVREEILKAL-L-NADLIGFHTFDYAR 269 (856)
Q Consensus 192 ~i~~~~~~~~D~VwihDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~~~~lp~r~eil~~l-l-~~dligf~t~~~~~ 269 (856)
++++..+| |+|++|+.....++..+-.+..++|+.+..|-.. +...+. ++...+.+-+ . .+|.+-..+....+
T Consensus 80 ~~l~~~~p--Dvv~~~~~~~~~~~~~~~a~~~~ip~v~~~~~~~-~~~~~~--~~~~~~~~~~~~~~~d~ii~~s~~~~~ 154 (384)
T 1vgv_A 80 PILAEFKP--DVVLVHGDTTTTLATSLAAFYQRIPVGHVEAGLR-TGDLYS--PWPEEANRTLTGHLAMYHFSPTETSRQ 154 (384)
T ss_dssp HHHHHHCC--SEEEEETTCHHHHHHHHHHHTTTCCEEEESCCCC-CSCTTS--STTHHHHHHHHHTTCSEEEESSHHHHH
T ss_pred HHHHHhCC--CEEEEeCCchHHHHHHHHHHHHCCCEEEEecccc-cccccC--CCchHhhHHHHHhhccEEEcCcHHHHH
Confidence 44556678 8999998534444544444455788887766432 222221 2223333333 2 38998888876666
Q ss_pred HHHHHHHhhhCceecccCceeeEEECCEEEEEEEeeccc-CchHHHHHhcCchHHHHHHHHHHHcC----CC-eEEEecc
Q 003025 270 HFLSCCSRMLGLEYQSKRGYIGLEYYGRTVGIKIMPVGI-HMGQIESVLRLADKDWRVQELKQQFE----GK-TVLLGVD 343 (856)
Q Consensus 270 ~Fl~~~~r~lg~~~~~~~~~~~~~~~gr~~~i~i~p~GI-d~~~~~~~~~~~~~~~~~~~l~~~~~----~k-~iil~Vd 343 (856)
.|.+ .|+.. .++.++|+|+ |...+..... +.......++++++. ++ .+++++|
T Consensus 155 ~l~~-----~g~~~---------------~~i~vi~n~~~d~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~vl~~~g 213 (384)
T 1vgv_A 155 NLLR-----ENVAD---------------SRIFITGNTVIDALLWVRDQV-MSSDKLRSELAANYPFIDPDKKMILVTGH 213 (384)
T ss_dssp HHHH-----TTCCG---------------GGEEECCCHHHHHHHHHHHHT-TTCHHHHHHHHTTCTTCCTTSEEEEEECC
T ss_pred HHHH-----cCCCh---------------hhEEEeCChHHHHHHhhhhcc-ccchhhhHHHHHhccccCCCCCEEEEEeC
Confidence 5543 24321 1245678884 4333221100 000011234555532 34 5788999
Q ss_pred Ccccc-CCHHHHHHHHHHHHHhCCCCcCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCcccEEEEcCCCC
Q 003025 344 DMDIF-KGVDLKLLAMEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDKPVT 422 (856)
Q Consensus 344 Rld~~-KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~~~~lv~~IN~~~~~~~~~pvv~~~~~v~ 422 (856)
|+... ||+..+++|+.++.+++|+++ |+.++. .++ +++++++++++. ...| .+.+.++
T Consensus 214 r~~~~~kg~~~li~a~~~l~~~~~~~~----l~i~~g----~~~---~~~~~l~~~~~~---------~~~v-~~~g~~~ 272 (384)
T 1vgv_A 214 RRESFGRGFEEICHALADIATTHQDIQ----IVYPVH----LNP---NVREPVNRILGH---------VKNV-ILIDPQE 272 (384)
T ss_dssp CBSSCCHHHHHHHHHHHHHHHHCTTEE----EEEECC----BCH---HHHHHHHHHHTT---------CTTE-EEECCCC
T ss_pred CccccchHHHHHHHHHHHHHhhCCCeE----EEEEcC----CCH---HHHHHHHHHhhc---------CCCE-EEeCCCC
Confidence 99987 999999999999999988754 554432 222 234455444321 1124 4556788
Q ss_pred HHHHHHHHHhcceeeeccccccCCCcccceeeeecCCCCCCCCCCCCCCCCceEEecCC-ccccccc--CCceeeCCCCH
Q 003025 423 LSERAAYYTIAECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEF-IGCSPSL--SGAIRVNPWNI 499 (856)
Q Consensus 423 ~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~g~lV~Se~-~G~~~~l--~~al~VnP~d~ 499 (856)
.+++..+|+.||+||.|| |.+.+|||+|+. |+|+|.. +|+.+.+ +.|++|+| |+
T Consensus 273 ~~~~~~~~~~ad~~v~~S-----g~~~lEA~a~G~-----------------PvI~~~~~~~~~e~v~~g~g~lv~~-d~ 329 (384)
T 1vgv_A 273 YLPFVWLMNHAWLILTDS-----GGIQEEAPSLGK-----------------PVLVMRDTTERPEAVTAGTVRLVGT-DK 329 (384)
T ss_dssp HHHHHHHHHHCSEEEESS-----STGGGTGGGGTC-----------------CEEEESSCCSCHHHHHHTSEEEECS-SH
T ss_pred HHHHHHHHHhCcEEEECC-----cchHHHHHHcCC-----------------CEEEccCCCCcchhhhCCceEEeCC-CH
Confidence 899999999999999999 445899999954 9999987 6666655 35899988 99
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHhhhhhcCCHHHHHHHHHH
Q 003025 500 EATAEAMHEAIQMNEAEKQLRHEKHYRYVSTHDVAYWARSFFQ 542 (856)
Q Consensus 500 ~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~~l~ 542 (856)
+++|++|.++|+. ++.++.+.++.+++...+++.+.++.+.+
T Consensus 330 ~~la~~i~~ll~d-~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 371 (384)
T 1vgv_A 330 QRIVEEVTRLLKD-ENEYQAMSRAHNPYGDGQACSRILEALKN 371 (384)
T ss_dssp HHHHHHHHHHHHC-HHHHHHHHSSCCTTCCSCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhC-hHHHhhhhhccCCCcCCCHHHHHHHHHHH
Confidence 9999999999984 44555555555666666666666555443
|
| >2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A* | Back alignment and structure |
|---|
Probab=99.67 E-value=3.2e-16 Score=177.84 Aligned_cols=159 Identities=9% Similarity=0.024 Sum_probs=122.3
Q ss_pred EEEEeecccCchHHHHHhcCchHHHHHHHHHHHcCCCeEEEeccCc-cccCCHHHHHHHHHHHHHhCCCCcCceEEEEEe
Q 003025 300 GIKIMPVGIHMGQIESVLRLADKDWRVQELKQQFEGKTVLLGVDDM-DIFKGVDLKLLAMEHLLKQHPKWQGRAVLVQIA 378 (856)
Q Consensus 300 ~i~i~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~k~iil~VdRl-d~~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~ 378 (856)
.+.++|+|+|.+.|... .....+++.|++++|+ .+.||+..+++||.++.+++|+.. ++.|+.+|
T Consensus 218 ~~~~i~~g~d~~~~~~~-------------~~~~~~~~~il~~gr~~~~~Kg~~~li~A~~~l~~~~~~~~-~~~l~ivG 283 (413)
T 2x0d_A 218 DEYFFQPKINTTLKNYI-------------NDKRQKEKIILVYGRPSVKRNAFTLIVEALKIFVQKYDRSN-EWKIISVG 283 (413)
T ss_dssp EEEEECCCCCHHHHTTT-------------TSCCCCCSEEEEEECTTCGGGCHHHHHHHHHHHHHHCTTGG-GCEEEEEE
T ss_pred ceEEeCCCcCchhhccc-------------ccccCCCCEEEEEecCchhccCHHHHHHHHHHHHHhCCCCC-ceEEEEEc
Confidence 35678999998765311 0112356788999996 689999999999999999988621 24588888
Q ss_pred cCCCCCchhHHHHHHHHHHHHHHHhcccCCCCcccEEEEcCCCCHHHHHHHHHhcceeeeccccccCCCcccceeeeecC
Q 003025 379 NPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDKPVTLSERAAYYTIAECVVVTAVRDGMNLTPYEYIVCRQG 458 (856)
Q Consensus 379 ~p~r~~~~~~~~l~~~~~~lv~~IN~~~~~~~~~pvv~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~a~~~~ 458 (856)
... .. .+.+ ....+.|.|.++.+|+.++|+.||+||+||..||||++++|||||+.
T Consensus 284 ~~~-----~~---------------~~l~---~~~~v~f~G~~~~~~l~~~~~~adv~v~pS~~E~~g~~~lEAmA~G~- 339 (413)
T 2x0d_A 284 EKH-----KD---------------IALG---KGIHLNSLGKLTLEDYADLLKRSSIGISLMISPHPSYPPLEMAHFGL- 339 (413)
T ss_dssp SCC-----CC---------------EEEE---TTEEEEEEESCCHHHHHHHHHHCCEEECCCSSSSCCSHHHHHHHTTC-
T ss_pred CCc-----hh---------------hhcC---CcCcEEEcCCCCHHHHHHHHHhCCEEEEecCCCCCCcHHHHHHhCCC-
Confidence 532 10 1111 22345677899999999999999999999999999999999999954
Q ss_pred CCCCCCCCCCCCCCCceEEecCCcccccccC---CceeeCCCCHHHHHHHHHHHHcCC
Q 003025 459 VSGSESSSESSAPKKSMLVVSEFIGCSPSLS---GAIRVNPWNIEATAEAMHEAIQMN 513 (856)
Q Consensus 459 ~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~al~VnP~d~~~~A~ai~~aL~m~ 513 (856)
|||++ .+|+.+.+. +|++|+|.|++++|++|.++++.+
T Consensus 340 ----------------PVV~~-~~g~~e~v~~~~~G~lv~~~d~~~la~ai~~ll~~~ 380 (413)
T 2x0d_A 340 ----------------RVITN-KYENKDLSNWHSNIVSLEQLNPENIAETLVELCMSF 380 (413)
T ss_dssp ----------------EEEEE-CBTTBCGGGTBTTEEEESSCSHHHHHHHHHHHHHHT
T ss_pred ----------------cEEEe-CCCcchhhhcCCCEEEeCCCCHHHHHHHHHHHHcCH
Confidence 88885 457776663 489999999999999999999854
|
| >3beo_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, allosteric, regulation, isomerase; HET: UD1 UDP; 1.70A {Bacillus anthracis} PDB: 1o6c_A | Back alignment and structure |
|---|
Probab=99.67 E-value=3.9e-16 Score=173.39 Aligned_cols=275 Identities=12% Similarity=0.097 Sum_probs=175.2
Q ss_pred HHHHHcCCCCCEEEEeCcccchHHHHHHhhcCCCeEEEEEccCCCChHHHhcCCchHHHHHHhH--hCCEEcccCHHHHH
Q 003025 192 RVIEVINPEDDYVWIHDYHLMVLPTFLRRRFTRLRMGFFLHSPFPSSEIYRTLPVREEILKALL--NADLIGFHTFDYAR 269 (856)
Q Consensus 192 ~i~~~~~~~~D~VwihDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~~~~lp~r~eil~~ll--~~dligf~t~~~~~ 269 (856)
++++..+| |+|++|......++..+..+..++|+.++.|. +.+...|. ++...+.+.++ .+|.+-..+....+
T Consensus 89 ~~l~~~~p--Dvv~~~~~~~~~~~~~~~~~~~~ip~v~~~~~-~~~~~~~~--~~~~~~~~~~~~~~~d~ii~~s~~~~~ 163 (375)
T 3beo_A 89 KVMKEAKP--DIVLVHGDTTTTFIASLAAFYNQIPVGHVEAG-LRTWDKYS--PYPEEMNRQLTGVMADLHFSPTAKSAT 163 (375)
T ss_dssp HHHHHHCC--SEEEEETTSHHHHHHHHHHHHTTCCEEEESCC-CCCSCTTS--STTHHHHHHHHHHHCSEEEESSHHHHH
T ss_pred HHHHHhCC--CEEEEeCCchHHHHHHHHHHHHCCCEEEEecc-cccccccC--CChhHhhhhHHhhhhheeeCCCHHHHH
Confidence 34455677 89999975433334333333457888765553 22222222 33344555433 38998888876665
Q ss_pred HHHHHHHhhhCceecccCceeeEEECCEEEEEEEeecc-cCchHHHHHhcCchHHHHHHHHHHHcC-CCeEEEeccCccc
Q 003025 270 HFLSCCSRMLGLEYQSKRGYIGLEYYGRTVGIKIMPVG-IHMGQIESVLRLADKDWRVQELKQQFE-GKTVLLGVDDMDI 347 (856)
Q Consensus 270 ~Fl~~~~r~lg~~~~~~~~~~~~~~~gr~~~i~i~p~G-Id~~~~~~~~~~~~~~~~~~~l~~~~~-~k~iil~VdRld~ 347 (856)
.+.+ .|+.. .++.++|+| +|...+....... .++++++. ++.++++++|+.+
T Consensus 164 ~~~~-----~g~~~---------------~~i~vi~n~~~d~~~~~~~~~~~------~~~~~~~~~~~~vl~~~gr~~~ 217 (375)
T 3beo_A 164 NLQK-----ENKDE---------------SRIFITGNTAIDALKTTVKETYS------HPVLEKLGNNRLVLMTAHRREN 217 (375)
T ss_dssp HHHH-----TTCCG---------------GGEEECCCHHHHHHHHHCCSSCC------CHHHHTTTTSEEEEEECCCGGG
T ss_pred HHHH-----cCCCc---------------ccEEEECChhHhhhhhhhhhhhh------HHHHHhccCCCeEEEEeccccc
Confidence 5543 23321 134568998 8876664221011 12334443 3456789999998
Q ss_pred c-CCHHHHHHHHHHHHHhCCCCcCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCcccEEEEcCCCCHHHH
Q 003025 348 F-KGVDLKLLAMEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDKPVTLSER 426 (856)
Q Consensus 348 ~-KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~~~~lv~~IN~~~~~~~~~pvv~~~~~v~~~el 426 (856)
. ||+..+++|++++.+++|+++ ++. +. +++ .+++++++++++. . +.+.+.+.++..++
T Consensus 218 ~~K~~~~li~a~~~l~~~~~~~~----~i~-~~-----g~~-~~~~~~~~~~~~~---------~-~~v~~~g~~~~~~~ 276 (375)
T 3beo_A 218 LGEPMRNMFRAIKRLVDKHEDVQ----VVY-PV-----HMN-PVVRETANDILGD---------Y-GRIHLIEPLDVIDF 276 (375)
T ss_dssp TTHHHHHHHHHHHHHHHHCTTEE----EEE-EC-----CSC-HHHHHHHHHHHTT---------C-TTEEEECCCCHHHH
T ss_pred chhHHHHHHHHHHHHHhhCCCeE----EEE-eC-----CCC-HHHHHHHHHHhhc---------c-CCEEEeCCCCHHHH
Confidence 6 999999999999999898764 433 31 122 2345555554221 1 12345678888999
Q ss_pred HHHHHhcceeeeccccccCCCcccceeeeecCCCCCCCCCCCCCCCCceEEecCC-cccccccC--CceeeCCCCHHHHH
Q 003025 427 AAYYTIAECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEF-IGCSPSLS--GAIRVNPWNIEATA 503 (856)
Q Consensus 427 ~aly~~ADv~vvtS~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~g~lV~Se~-~G~~~~l~--~al~VnP~d~~~~A 503 (856)
..+|+.||++|.|| |.+++|||+|+. |+|+|.. +|..+.+. .|++|+| |++++|
T Consensus 277 ~~~~~~ad~~v~~s-----g~~~lEA~a~G~-----------------Pvi~~~~~~~~~e~v~~g~g~~v~~-d~~~la 333 (375)
T 3beo_A 277 HNVAARSYLMLTDS-----GGVQEEAPSLGV-----------------PVLVLRDTTERPEGIEAGTLKLAGT-DEETIF 333 (375)
T ss_dssp HHHHHTCSEEEECC-----HHHHHHHHHHTC-----------------CEEECSSCCSCHHHHHTTSEEECCS-CHHHHH
T ss_pred HHHHHhCcEEEECC-----CChHHHHHhcCC-----------------CEEEecCCCCCceeecCCceEEcCC-CHHHHH
Confidence 99999999999999 566999999955 9999964 77666663 4788887 999999
Q ss_pred HHHHHHHcCCHHHHHHHHHHHhhhhhcCCHHHHHHHHHH
Q 003025 504 EAMHEAIQMNEAEKQLRHEKHYRYVSTHDVAYWARSFFQ 542 (856)
Q Consensus 504 ~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~~l~ 542 (856)
++|.++++. ++.++.+.++.+++...+++.+.++.+.+
T Consensus 334 ~~i~~ll~~-~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 371 (375)
T 3beo_A 334 SLADELLSD-KEAHDKMSKASNPYGDGRASERIVEAILK 371 (375)
T ss_dssp HHHHHHHHC-HHHHHHHCCCCCTTCCSCHHHHHHHHHHH
T ss_pred HHHHHHHhC-hHhHhhhhhcCCCCCCCcHHHHHHHHHHH
Confidence 999999984 44454444455666666666666655443
|
| >2hy7_A Glucuronosyltransferase GUMK; glycosyltransferases, xanthan, membrane-associated proteins; 1.90A {Xanthomonas campestris} PDB: 2q6v_A* 3cv3_A* 3cuy_A* | Back alignment and structure |
|---|
Probab=99.66 E-value=4.5e-16 Score=176.23 Aligned_cols=168 Identities=12% Similarity=0.069 Sum_probs=129.2
Q ss_pred EEEEeecccCchHHHHHhcCchHHHHHHHHHHHcCCCeEEEeccCccccCCHHHHHHHHHHHHHhCCCCcCceEEEEEec
Q 003025 300 GIKIMPVGIHMGQIESVLRLADKDWRVQELKQQFEGKTVLLGVDDMDIFKGVDLKLLAMEHLLKQHPKWQGRAVLVQIAN 379 (856)
Q Consensus 300 ~i~i~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~k~iil~VdRld~~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~ 379 (856)
++.++|+|||.+.|.+.... ...++++|++|||+.+.||+ ++.+.+++|+++ |+++|.
T Consensus 198 ~i~vipngvd~~~f~~~~~~------------~~~~~~~i~~vGrl~~~Kg~------~~~l~~~~~~~~----l~ivG~ 255 (406)
T 2hy7_A 198 NVFHVGHGVDHNLDQLGDPS------------PYAEGIHAVAVGSMLFDPEF------FVVASKAFPQVT----FHVIGS 255 (406)
T ss_dssp TEEECCCCBCTTHHHHHCSC------------SCCSSEEEEEECCTTBCHHH------HHHHHHHCTTEE----EEEESC
T ss_pred CEEEEcCCcChHhcCccccc------------ccCCCcEEEEEeccccccCH------HHHHHHhCCCeE----EEEEeC
Confidence 67889999999988643221 12345899999999999999 555667788754 887773
Q ss_pred CCCCCchhHHHHHHHHHHHHHHHhcccCCCCcccEEEEcCCCCHHHHHHHHHhcceeeeccccccCCCccccee------
Q 003025 380 PARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDKPVTLSERAAYYTIAECVVVTAVRDGMNLTPYEYI------ 453 (856)
Q Consensus 380 p~r~~~~~~~~l~~~~~~lv~~IN~~~~~~~~~pvv~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~------ 453 (856)
|+ + ...+..+.+.+.|.++.+++.++|+.||+||+||..||||++.+|||
T Consensus 256 -----g~------------~-------~~~~l~~~V~f~G~~~~~~l~~~~~~adv~v~ps~~E~~~~~~lEAm~Kl~eY 311 (406)
T 2hy7_A 256 -----GM------------G-------RHPGYGDNVIVYGEMKHAQTIGYIKHARFGIAPYASEQVPVYLADSSMKLLQY 311 (406)
T ss_dssp -----SS------------C-------CCTTCCTTEEEECCCCHHHHHHHHHTCSEEECCBSCSCCCTTHHHHCHHHHHH
T ss_pred -----ch------------H-------HhcCCCCCEEEcCCCCHHHHHHHHHhcCEEEECCCcccCchHHHHHHHHHHHH
Confidence 22 1 11133344567789999999999999999999999999999999999
Q ss_pred -eeecCCCCCCCCCCCCCCCCceEEecCCcccccccCCcee-eCCCCHHHHHHHHHHHHcCCHHHHHHHHHHHhhhhhcC
Q 003025 454 -VCRQGVSGSESSSESSAPKKSMLVVSEFIGCSPSLSGAIR-VNPWNIEATAEAMHEAIQMNEAEKQLRHEKHYRYVSTH 531 (856)
Q Consensus 454 -a~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~~al~-VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~ 531 (856)
||+. |+|+|+. ..+ -.+|++ |+|.|++++|++|.++|+.++ ++....+
T Consensus 312 la~G~-----------------PVIas~~--v~~-~~~G~l~v~~~d~~~la~ai~~ll~~~~----------~~~~~~~ 361 (406)
T 2hy7_A 312 DFFGL-----------------PAVCPNA--VVG-PYKSRFGYTPGNADSVIAAITQALEAPR----------VRYRQCL 361 (406)
T ss_dssp HHHTC-----------------CEEEEGG--GTC-SCSSEEEECTTCHHHHHHHHHHHHHCCC----------CCCSCCC
T ss_pred hhCCC-----------------cEEEehh--ccc-CcceEEEeCCCCHHHHHHHHHHHHhCcc----------hhhhhcC
Confidence 9954 9999987 111 124888 999999999999999998765 1456778
Q ss_pred CHHHHHHHHHHH
Q 003025 532 DVAYWARSFFQD 543 (856)
Q Consensus 532 ~~~~W~~~~l~~ 543 (856)
++...++++++-
T Consensus 362 sw~~~a~~~~~~ 373 (406)
T 2hy7_A 362 NWSDTTDRVLDP 373 (406)
T ss_dssp BHHHHHHHHHCG
T ss_pred CHHHHHHHHHHh
Confidence 888888877654
|
| >2f9f_A First mannosyl transferase (WBAZ-1); alpha-beta protein, structural genomics, PSI, protein struct initiative; 1.80A {Archaeoglobus fulgidus} SCOP: c.87.1.8 | Back alignment and structure |
|---|
Probab=99.63 E-value=3.5e-16 Score=155.90 Aligned_cols=142 Identities=15% Similarity=0.129 Sum_probs=112.5
Q ss_pred CCCeEEEeccCccccCCHHHHHHHHHHHHHhCCCCcCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCccc
Q 003025 334 EGKTVLLGVDDMDIFKGVDLKLLAMEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEP 413 (856)
Q Consensus 334 ~~k~iil~VdRld~~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~~~~lv~~IN~~~~~~~~~p 413 (856)
.++++|+++||+.+.||+..+++|++++ |+++ |+.+|... +.+++++. +.++.. +..+
T Consensus 21 ~~~~~i~~~G~~~~~Kg~~~li~a~~~l----~~~~----l~i~G~~~-----~~~~l~~~----~~~~~~-----~l~~ 78 (177)
T 2f9f_A 21 CYGDFWLSVNRIYPEKRIELQLEVFKKL----QDEK----LYIVGWFS-----KGDHAERY----ARKIMK-----IAPD 78 (177)
T ss_dssp CCCSCEEEECCSSGGGTHHHHHHHHHHC----TTSC----EEEEBCCC-----TTSTHHHH----HHHHHH-----HSCT
T ss_pred CCCCEEEEEeccccccCHHHHHHHHHhC----CCcE----EEEEecCc-----cHHHHHHH----HHhhhc-----ccCC
Confidence 4678999999999999999999999886 5554 77777532 22233333 331111 1122
Q ss_pred EEEEcCCCCHHHHHHHHHhcceeeeccccccCCCcccceeeeecCCCCCCCCCCCCCCCCceEEecCCcccccccC---C
Q 003025 414 VVFIDKPVTLSERAAYYTIAECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIGCSPSLS---G 490 (856)
Q Consensus 414 vv~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~ 490 (856)
.+.+.+.++.+++..+|+.||++|+||..||||++++|||+|+. |+|+|..+|..+.+. .
T Consensus 79 ~v~~~g~~~~~e~~~~~~~adi~v~ps~~e~~~~~~~Eama~G~-----------------PvI~~~~~~~~e~i~~~~~ 141 (177)
T 2f9f_A 79 NVKFLGSVSEEELIDLYSRCKGLLCTAKDEDFGLTPIEAMASGK-----------------PVIAVNEGGFKETVINEKT 141 (177)
T ss_dssp TEEEEESCCHHHHHHHHHHCSEEEECCSSCCSCHHHHHHHHTTC-----------------CEEEESSHHHHHHCCBTTT
T ss_pred cEEEeCCCCHHHHHHHHHhCCEEEeCCCcCCCChHHHHHHHcCC-----------------cEEEeCCCCHHHHhcCCCc
Confidence 34456799999999999999999999999999999999999954 999999988888883 4
Q ss_pred ceeeCCCCHHHHHHHHHHHHcCCHH
Q 003025 491 AIRVNPWNIEATAEAMHEAIQMNEA 515 (856)
Q Consensus 491 al~VnP~d~~~~A~ai~~aL~m~~~ 515 (856)
|+++ +.|+++++++|.++++.++.
T Consensus 142 g~~~-~~d~~~l~~~i~~l~~~~~~ 165 (177)
T 2f9f_A 142 GYLV-NADVNEIIDAMKKVSKNPDK 165 (177)
T ss_dssp EEEE-CSCHHHHHHHHHHHHHCTTT
T ss_pred cEEe-CCCHHHHHHHHHHHHhCHHH
Confidence 8899 99999999999999987753
|
| >1v4v_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, two domains, homodimer, riken structural genomics/proteomics initiative, RSGI; HET: MSE; 1.80A {Thermus thermophilus} SCOP: c.87.1.3 | Back alignment and structure |
|---|
Probab=99.56 E-value=3.7e-14 Score=157.78 Aligned_cols=251 Identities=15% Similarity=0.132 Sum_probs=155.6
Q ss_pred HHHHHcCCCCCEEEEeCcccchHHHHHHhhcCCCeEEEEEccCCCChHHHhcCCchHHHHHHhH--hCCEEcccCHHHHH
Q 003025 192 RVIEVINPEDDYVWIHDYHLMVLPTFLRRRFTRLRMGFFLHSPFPSSEIYRTLPVREEILKALL--NADLIGFHTFDYAR 269 (856)
Q Consensus 192 ~i~~~~~~~~D~VwihDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~~~~lp~r~eil~~ll--~~dligf~t~~~~~ 269 (856)
++++..+| |+|++|++....++..+..+..++|+. ..|.++.+...+. ++...+.+.++ .+|.+-..+....+
T Consensus 85 ~~l~~~~p--Dvv~~~~~~~~~~~~~~~a~~~~ip~v-~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~s~~~~~ 159 (376)
T 1v4v_A 85 RALKEMGA--DYVLVHGDTLTTFAVAWAAFLEGIPVG-HVEAGLRSGNLKE--PFPEEANRRLTDVLTDLDFAPTPLAKA 159 (376)
T ss_dssp HHHHHTTC--SEEEEESSCHHHHHHHHHHHHTTCCEE-EETCCCCCSCTTS--STTHHHHHHHHHHHCSEEEESSHHHHH
T ss_pred HHHHHcCC--CEEEEeCChHHHHHHHHHHHHhCCCEE-EEeCCCccccccC--CCchHHHHHHHHHHhceeeCCCHHHHH
Confidence 45566677 899999876555665444444578875 5565543322222 22233333222 37888777766555
Q ss_pred HHHHHHHhhhCceecccCceeeEEECCEEEEEEEeecc-cCchHHHHHhcCchHHHHHHHHHHHcC-CCeEEEeccCccc
Q 003025 270 HFLSCCSRMLGLEYQSKRGYIGLEYYGRTVGIKIMPVG-IHMGQIESVLRLADKDWRVQELKQQFE-GKTVLLGVDDMDI 347 (856)
Q Consensus 270 ~Fl~~~~r~lg~~~~~~~~~~~~~~~gr~~~i~i~p~G-Id~~~~~~~~~~~~~~~~~~~l~~~~~-~k~iil~VdRld~ 347 (856)
.|.+ .|+.. .++.++|++ +|...+... ..+++++++ ++.++++++|+..
T Consensus 160 ~l~~-----~g~~~---------------~ki~vi~n~~~d~~~~~~~---------~~~~~~~~~~~~~vl~~~gr~~~ 210 (376)
T 1v4v_A 160 NLLK-----EGKRE---------------EGILVTGQTGVDAVLLAAK---------LGRLPEGLPEGPYVTVTMHRREN 210 (376)
T ss_dssp HHHT-----TTCCG---------------GGEEECCCHHHHHHHHHHH---------HCCCCTTCCSSCEEEECCCCGGG
T ss_pred HHHH-----cCCCc---------------ceEEEECCchHHHHhhhhh---------hhHHHHhcCCCCEEEEEeCcccc
Confidence 5543 13310 123455654 453322111 011223343 4567788999999
Q ss_pred cCCHHHHHHHHHHHHHhCCCCcCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCcccEEEEcCCCCHHHHH
Q 003025 348 FKGVDLKLLAMEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDKPVTLSERA 427 (856)
Q Consensus 348 ~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~~~~lv~~IN~~~~~~~~~pvv~~~~~v~~~el~ 427 (856)
.||+..+++|++++.+++|+++ ++.++. +++ +++++++++++. ...| .+.+.++..++.
T Consensus 211 ~k~~~~ll~a~~~l~~~~~~~~----lv~~~g----~~~---~~~~~l~~~~~~---------~~~v-~~~g~~g~~~~~ 269 (376)
T 1v4v_A 211 WPLLSDLAQALKRVAEAFPHLT----FVYPVH----LNP---VVREAVFPVLKG---------VRNF-VLLDPLEYGSMA 269 (376)
T ss_dssp GGGHHHHHHHHHHHHHHCTTSE----EEEECC----SCH---HHHHHHHHHHTT---------CTTE-EEECCCCHHHHH
T ss_pred hHHHHHHHHHHHHHHhhCCCeE----EEEECC----CCH---HHHHHHHHHhcc---------CCCE-EEECCCCHHHHH
Confidence 9999999999999999898764 554422 222 234445444321 1124 455677888999
Q ss_pred HHHHhcceeeeccccccCCCcccceeeeecCCCCCCCCCCCCCCCCceEEecC-Cccccccc--CCceeeCCCCHHHHHH
Q 003025 428 AYYTIAECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSE-FIGCSPSL--SGAIRVNPWNIEATAE 504 (856)
Q Consensus 428 aly~~ADv~vvtS~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~g~lV~Se-~~G~~~~l--~~al~VnP~d~~~~A~ 504 (856)
.+|+.||+||.+| +|+ .+|||+|+. |+|++. .+|+.+.+ ..|++|+ .|++++|+
T Consensus 270 ~~~~~ad~~v~~S--~g~---~lEA~a~G~-----------------PvI~~~~~~~~~~~~~~g~g~lv~-~d~~~la~ 326 (376)
T 1v4v_A 270 ALMRASLLLVTDS--GGL---QEEGAALGV-----------------PVVVLRNVTERPEGLKAGILKLAG-TDPEGVYR 326 (376)
T ss_dssp HHHHTEEEEEESC--HHH---HHHHHHTTC-----------------CEEECSSSCSCHHHHHHTSEEECC-SCHHHHHH
T ss_pred HHHHhCcEEEECC--cCH---HHHHHHcCC-----------------CEEeccCCCcchhhhcCCceEECC-CCHHHHHH
Confidence 9999999999999 665 779999955 888875 45555544 2478885 49999999
Q ss_pred HHHHHHcCCHHHHHHHH
Q 003025 505 AMHEAIQMNEAEKQLRH 521 (856)
Q Consensus 505 ai~~aL~m~~~er~~r~ 521 (856)
+|.++|+. ++.++.+.
T Consensus 327 ~i~~ll~d-~~~~~~~~ 342 (376)
T 1v4v_A 327 VVKGLLEN-PEELSRMR 342 (376)
T ss_dssp HHHHHHTC-HHHHHHHH
T ss_pred HHHHHHhC-hHhhhhhc
Confidence 99999984 44444333
|
| >2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A* | Back alignment and structure |
|---|
Probab=99.55 E-value=3e-14 Score=167.69 Aligned_cols=170 Identities=12% Similarity=0.048 Sum_probs=136.0
Q ss_pred CCeEEEeccCccccCCHHHHHHHHHHHHHhCCCCcCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCcc-c
Q 003025 335 GKTVLLGVDDMDIFKGVDLKLLAMEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYE-P 413 (856)
Q Consensus 335 ~k~iil~VdRld~~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~~~~lv~~IN~~~~~~~~~-p 413 (856)
+.+++++++|+.+ ||+..+++||.++++++|+++ |+++|. +++..+++ ++++.+. +.. +
T Consensus 375 ~~~~v~~~g~~~~-K~~~~li~a~~~l~~~~~~~~----l~i~G~----~g~~~~~l----~~~~~~~-------~l~~~ 434 (568)
T 2vsy_A 375 EQGVVLCCFNNSY-KLNPQSMARMLAVLREVPDSV----LWLLSG----PGEADARL----RAFAHAQ-------GVDAQ 434 (568)
T ss_dssp TTSCEEEECCCGG-GCCHHHHHHHHHHHHHCTTCE----EEEECC----STTHHHHH----HHHHHHT-------TCCGG
T ss_pred CCCEEEEeCCccc-cCCHHHHHHHHHHHHhCCCcE----EEEecC----CHHHHHHH----HHHHHHc-------CCChh
Confidence 4457779999999 999999999999999999765 887772 34444444 4444442 333 3
Q ss_pred EEEEcCCCCHHHHHHHHHhcceeeeccccccCCCcccceeeeecCCCCCCCCCCCCCCCCceEEe-------cCCc----
Q 003025 414 VVFIDKPVTLSERAAYYTIAECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVV-------SEFI---- 482 (856)
Q Consensus 414 vv~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~g~lV~-------Se~~---- 482 (856)
.+.|.|.++.+++.++|+.|||||+||.+ |||++++|||+|+. |+|+ |+.+
T Consensus 435 ~v~~~g~~~~~~~~~~~~~adv~v~ps~~-~~g~~~lEAma~G~-----------------Pvv~~~g~~~~s~~~~~~l 496 (568)
T 2vsy_A 435 RLVFMPKLPHPQYLARYRHADLFLDTHPY-NAHTTASDALWTGC-----------------PVLTTPGETFAARVAGSLN 496 (568)
T ss_dssp GEEEECCCCHHHHHHHGGGCSEEECCSSS-CCSHHHHHHHHTTC-----------------CEEBCCCSSGGGSHHHHHH
T ss_pred HEEeeCCCCHHHHHHHHhcCCEEeeCCCC-CCcHHHHHHHhCCC-----------------CEEeccCCCchHHHHHHHH
Confidence 45677899999999999999999999999 99999999999954 9999 9998
Q ss_pred ---ccccccCCceeeCCCCHHHHHHHHHHHHcCCHHHHHHHHHHHhhhh---hcCCHHHHHHHHHHHHHHHHHh
Q 003025 483 ---GCSPSLSGAIRVNPWNIEATAEAMHEAIQMNEAEKQLRHEKHYRYV---STHDVAYWARSFFQDMERTCKD 550 (856)
Q Consensus 483 ---G~~~~l~~al~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v---~~~~~~~W~~~~l~~l~~~~~~ 550 (856)
|+.+.+.+ |+++++++|.++++. ++.+....++.++.+ ..+++..+++.+.+-+++..+.
T Consensus 497 ~~~g~~e~v~~-------~~~~la~~i~~l~~~-~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~y~~~~~~ 562 (568)
T 2vsy_A 497 HHLGLDEMNVA-------DDAAFVAKAVALASD-PAALTALHARVDVLRRASGVFHMDGFADDFGALLQALARR 562 (568)
T ss_dssp HHHTCGGGBCS-------SHHHHHHHHHHHHHC-HHHHHHHHHHHHHHHHHSSTTCHHHHHHHHHHHHHHHHHT
T ss_pred HHCCChhhhcC-------CHHHHHHHHHHHhcC-HHHHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHH
Confidence 88776543 899999999999984 455555666677777 6699999999998888877654
|
| >1f0k_A MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol...; rossmann fold, transferase; 1.90A {Escherichia coli} SCOP: c.87.1.2 PDB: 1nlm_A* | Back alignment and structure |
|---|
Probab=99.51 E-value=7.1e-14 Score=154.53 Aligned_cols=259 Identities=13% Similarity=0.035 Sum_probs=163.4
Q ss_pred HHHHHcCCCCCEEEEeCcccchHHHHHHhhcCCCeEEEEEccCCCChHHHhcCCchHHHHHHhHhCCEEcccCHHHHHHH
Q 003025 192 RVIEVINPEDDYVWIHDYHLMVLPTFLRRRFTRLRMGFFLHSPFPSSEIYRTLPVREEILKALLNADLIGFHTFDYARHF 271 (856)
Q Consensus 192 ~i~~~~~~~~D~VwihDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~~~~lp~r~eil~~ll~~dligf~t~~~~~~F 271 (856)
++++..+| |+|++|..... ++..+..+..++|+.+..|..+|..- ..++. -.+|.+...+.
T Consensus 90 ~~l~~~~p--Dvv~~~~~~~~-~~~~~~~~~~~~p~v~~~~~~~~~~~--------~~~~~--~~~d~v~~~~~------ 150 (364)
T 1f0k_A 90 AIMKAYKP--DVVLGMGGYVS-GPGGLAAWSLGIPVVLHEQNGIAGLT--------NKWLA--KIATKVMQAFP------ 150 (364)
T ss_dssp HHHHHHCC--SEEEECSSTTH-HHHHHHHHHTTCCEEEEECSSSCCHH--------HHHHT--TTCSEEEESST------
T ss_pred HHHHhcCC--CEEEEeCCcCc-hHHHHHHHHcCCCEEEEecCCCCcHH--------HHHHH--HhCCEEEecCh------
Confidence 34455677 89999965432 33444344457888888887665310 11110 02444332111
Q ss_pred HHHHHhhhCceecccCceeeEEECCEEEEEEEeecccCchHHHHHhcCchHHHHHHHHHHHcCCCe-EEEeccCccccCC
Q 003025 272 LSCCSRMLGLEYQSKRGYIGLEYYGRTVGIKIMPVGIHMGQIESVLRLADKDWRVQELKQQFEGKT-VLLGVDDMDIFKG 350 (856)
Q Consensus 272 l~~~~r~lg~~~~~~~~~~~~~~~gr~~~i~i~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~k~-iil~VdRld~~KG 350 (856)
. . + . ++.++|+||+...+.. +.. ..++ ..-.+++ +++.+||+.+.||
T Consensus 151 ---------------~-~----~-~---~~~~i~n~v~~~~~~~----~~~---~~~~-~~~~~~~~il~~~g~~~~~k~ 198 (364)
T 1f0k_A 151 ---------------G-A----F-P---NAEVVGNPVRTDVLAL----PLP---QQRL-AGREGPVRVLVVGGSQGARIL 198 (364)
T ss_dssp ---------------T-S----S-S---SCEECCCCCCHHHHTS----CCH---HHHH-TTCCSSEEEEEECTTTCCHHH
T ss_pred ---------------h-h----c-C---CceEeCCccchhhccc----chh---hhhc-ccCCCCcEEEEEcCchHhHHH
Confidence 1 0 1 1 3457899999876632 111 1111 0113445 5666789999999
Q ss_pred HHHHHHHHHHHHHhCCCCcCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCcccEEEEcCCCCHHHHHHHH
Q 003025 351 VDLKLLAMEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDKPVTLSERAAYY 430 (856)
Q Consensus 351 i~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~~~~lv~~IN~~~~~~~~~pvv~~~~~v~~~el~aly 430 (856)
+..+++|++++.+ ++.++.++. +++ .+++ ++++++.+ ...|. +.+.+ +++..+|
T Consensus 199 ~~~li~a~~~l~~-------~~~~l~i~G----~~~-~~~l----~~~~~~~~-------~~~v~-~~g~~--~~~~~~~ 252 (364)
T 1f0k_A 199 NQTMPQVAAKLGD-------SVTIWHQSG----KGS-QQSV----EQAYAEAG-------QPQHK-VTEFI--DDMAAAY 252 (364)
T ss_dssp HHHHHHHHHHHGG-------GEEEEEECC----TTC-HHHH----HHHHHHTT-------CTTSE-EESCC--SCHHHHH
T ss_pred HHHHHHHHHHhcC-------CcEEEEEcC----Cch-HHHH----HHHHhhcC-------CCceE-Eecch--hhHHHHH
Confidence 9999999998843 244333332 222 2333 34444322 11233 45565 7899999
Q ss_pred HhcceeeeccccccCCCcccceeeeecCCCCCCCCCCCCCCCCceEEecCCccccc-------cc---CCceeeCCCC--
Q 003025 431 TIAECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIGCSP-------SL---SGAIRVNPWN-- 498 (856)
Q Consensus 431 ~~ADv~vvtS~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~-------~l---~~al~VnP~d-- 498 (856)
+.||++|+|| | +++++|||+|+. |+|+|..+|... .+ ..|++++|.|
T Consensus 253 ~~ad~~v~~s---g-~~~~~EAma~G~-----------------Pvi~~~~~g~~~~q~~~~~~~~~~g~g~~~~~~d~~ 311 (364)
T 1f0k_A 253 AWADVVVCRS---G-ALTVSEIAAAGL-----------------PALFVPFQHKDRQQYWNALPLEKAGAAKIIEQPQLS 311 (364)
T ss_dssp HHCSEEEECC---C-HHHHHHHHHHTC-----------------CEEECCCCCTTCHHHHHHHHHHHTTSEEECCGGGCC
T ss_pred HhCCEEEECC---c-hHHHHHHHHhCC-----------------CEEEeeCCCCchhHHHHHHHHHhCCcEEEeccccCC
Confidence 9999999999 4 899999999954 999999988632 34 2389999988
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHhhhhhcCCHHHHHHHHHHHHHHHHHhh
Q 003025 499 IEATAEAMHEAIQMNEAEKQLRHEKHYRYVSTHDVAYWARSFFQDMERTCKDH 551 (856)
Q Consensus 499 ~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~l~~~~~~~ 551 (856)
++++|++|.++ +++.++...++.++++..+++..-++.+.+.+++..+.|
T Consensus 312 ~~~la~~i~~l---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~ 361 (364)
T 1f0k_A 312 VDAVANTLAGW---SRETLLTMAERARAASIPDATERVANEVSRVARALEHHH 361 (364)
T ss_dssp HHHHHHHHHTC---CHHHHHHHHHHHHHTCCTTHHHHHHHHHHHHHTTC----
T ss_pred HHHHHHHHHhc---CHHHHHHHHHHHHHhhccCHHHHHHHHHHHHHHHHHhhc
Confidence 99999999987 566677777777888888888888887777666655444
|
| >2xci_A KDO-transferase, 3-deoxy-D-manno-2-octulosonic acid transferase; KDTA, GSEA, glycosyltransferase superfamily B,; HET: PG4; 2.00A {Aquifex aeolicus} PDB: 2xcu_A* | Back alignment and structure |
|---|
Probab=99.47 E-value=1.9e-13 Score=152.93 Aligned_cols=250 Identities=10% Similarity=-0.001 Sum_probs=156.1
Q ss_pred HHHHHHcCCCCCEEEEeCcccchHHHHHHhhcCCCeEEEEEccCCCChHHHhcCCchHHHHHH-hHhCCEEcccCHHHHH
Q 003025 191 QRVIEVINPEDDYVWIHDYHLMVLPTFLRRRFTRLRMGFFLHSPFPSSEIYRTLPVREEILKA-LLNADLIGFHTFDYAR 269 (856)
Q Consensus 191 ~~i~~~~~~~~D~VwihDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~~~~lp~r~eil~~-ll~~dligf~t~~~~~ 269 (856)
.++++..+| |+|+++.++++. .++.... . |+.+..+.-.+.+ +.+. +-.+|.|-+++....+
T Consensus 104 ~~~l~~~~p--Div~~~~~~~~~--~~~~~~~-~-p~~~~~~~~~~~~-----------~~~~~~~~~d~ii~~S~~~~~ 166 (374)
T 2xci_A 104 KRFEELSKP--KALIVVEREFWP--SLIIFTK-V-PKILVNAYAKGSL-----------IEKILSKKFDLIIMRTQEDVE 166 (374)
T ss_dssp HHHHHHHCC--SEEEEESCCCCH--HHHHHCC-S-CEEEEEECCCCCH-----------HHHHHHTTCSEEEESCHHHHH
T ss_pred HHHHHHhCC--CEEEEECccCcH--HHHHHHh-C-CEEEEEeecCchH-----------HHHHHHHhCCEEEECCHHHHH
Confidence 345566788 899988887653 4443221 1 5544433211111 2222 3458999999988777
Q ss_pred HHHHHHHhhhCceecccCceeeEEECCEEEEEEEeecccCchHHHHHhcCchHHHHHHHHHHHcCCCeEEEeccCccccC
Q 003025 270 HFLSCCSRMLGLEYQSKRGYIGLEYYGRTVGIKIMPVGIHMGQIESVLRLADKDWRVQELKQQFEGKTVLLGVDDMDIFK 349 (856)
Q Consensus 270 ~Fl~~~~r~lg~~~~~~~~~~~~~~~gr~~~i~i~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~k~iil~VdRld~~K 349 (856)
.|.+ +|+. +|.++|+|. |... .+. ++.+. +++++++++ ..|
T Consensus 167 ~l~~-----~g~~-----------------ki~vi~n~~----f~~~--~~~--------~~~l~-~~vi~~~~~--~~k 207 (374)
T 2xci_A 167 KFKT-----FGAK-----------------RVFSCGNLK----FICQ--KGK--------GIKLK-GEFIVAGSI--HTG 207 (374)
T ss_dssp HHHT-----TTCC-----------------SEEECCCGG----GCCC--CCS--------CCCCS-SCEEEEEEE--CGG
T ss_pred HHHH-----cCCC-----------------eEEEcCCCc----cCCC--cCh--------hhhhc-CCEEEEEeC--CCc
Confidence 6653 1321 345566652 1110 000 01111 257777776 358
Q ss_pred CHHHHHHHHHHHHHhCCCCcCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccC--CCCcccEEEEcCCCCHHHHH
Q 003025 350 GVDLKLLAMEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFG--RPGYEPVVFIDKPVTLSERA 427 (856)
Q Consensus 350 Gi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~~~~lv~~IN~~~~--~~~~~pvv~~~~~v~~~el~ 427 (856)
|+..+++|+.++.+++|+++ |+++| ++++.. +++++++++.+-.+. ..+. ..+++.+. .+|+.
T Consensus 208 ~~~~ll~A~~~l~~~~p~~~----lvivG-----~g~~~~---~~l~~~~~~~gl~~~~~~~~~-~~v~~~~~--~~dl~ 272 (374)
T 2xci_A 208 EVEIILKAFKEIKKTYSSLK----LILVP-----RHIENA---KIFEKKARDFGFKTSFFENLE-GDVILVDR--FGILK 272 (374)
T ss_dssp GHHHHHHHHHHHHTTCTTCE----EEEEE-----SSGGGH---HHHHHHHHHTTCCEEETTCCC-SSEEECCS--SSCHH
T ss_pred hHHHHHHHHHHHHhhCCCcE----EEEEC-----CCHHHH---HHHHHHHHHCCCceEEecCCC-CcEEEECC--HHHHH
Confidence 99999999999999999876 77776 344431 234444444432210 0000 23445553 46899
Q ss_pred HHHHhcceeeecc-ccccCCCcccceeeeecCCCCCCCCCCCCCCCCceEEec-CCccccccc----CCceeeCCCCHHH
Q 003025 428 AYYTIAECVVVTA-VRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVS-EFIGCSPSL----SGAIRVNPWNIEA 501 (856)
Q Consensus 428 aly~~ADv~vvtS-~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~g~lV~S-e~~G~~~~l----~~al~VnP~d~~~ 501 (856)
.+|+.||+++++| ..|++|++++|||||+. |+|++ +..|+.+.+ .+|.++.|.|+++
T Consensus 273 ~~y~~aDv~vl~ss~~e~gg~~~lEAmA~G~-----------------PVI~~~~~~~~~e~~~~~~~~G~l~~~~d~~~ 335 (374)
T 2xci_A 273 ELYPVGKIAIVGGTFVNIGGHNLLEPTCWGI-----------------PVIYGPYTHKVNDLKEFLEKEGAGFEVKNETE 335 (374)
T ss_dssp HHGGGEEEEEECSSSSSSCCCCCHHHHTTTC-----------------CEEECSCCTTSHHHHHHHHHTTCEEECCSHHH
T ss_pred HHHHhCCEEEECCcccCCCCcCHHHHHHhCC-----------------CEEECCCccChHHHHHHHHHCCCEEEeCCHHH
Confidence 9999999988876 55778999999999954 88876 566666644 3588899999999
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHhhhhhc
Q 003025 502 TAEAMHEAIQMNEAEKQLRHEKHYRYVST 530 (856)
Q Consensus 502 ~A~ai~~aL~m~~~er~~r~~~~~~~v~~ 530 (856)
+|++|.++|+ + +.++.+.++.++++.+
T Consensus 336 La~ai~~ll~-d-~~r~~mg~~ar~~~~~ 362 (374)
T 2xci_A 336 LVTKLTELLS-V-KKEIKVEEKSREIKGC 362 (374)
T ss_dssp HHHHHHHHHH-S-CCCCCHHHHHHHHHHH
T ss_pred HHHHHHHHHh-H-HHHHHHHHHHHHHHHh
Confidence 9999999998 3 5555556666666544
|
| >3pdw_A Uncharacterized hydrolase YUTF; structural genomics, PSI2, NYSGXRC, protein structure initia YORK SGX research center for structural genomics; 1.60A {Bacillus subtilis} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.43 E-value=1e-13 Score=147.01 Aligned_cols=76 Identities=18% Similarity=0.246 Sum_probs=61.8
Q ss_pred EEEEeCCCCHHHHHHHHHHHhhhcCCCcceEEEEeCC-chhHHHHHHccccccCCCCCCCccEEEEEeCCC-----cc--
Q 003025 749 VEVKPQGVSKGVVAEKIFTTMAESGRHADFVLCIGDD-RSDEDMFEIIGNATSSGVLSSNASVFACTVGQK-----PS-- 820 (856)
Q Consensus 749 vEI~p~gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD~-~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~-----~s-- 820 (856)
.|+.+.+..|+.+++.+++++ |++++++++|||+ .||++|++.+|.. ++.|..|.. +.
T Consensus 176 ~~~~~~~kp~~~~~~~~~~~l---gi~~~~~~~iGD~~~~Di~~~~~aG~~-----------~~~v~~g~~~~~~~~~~~ 241 (266)
T 3pdw_A 176 VQPVFIGKPESIIMEQAMRVL---GTDVSETLMVGDNYATDIMAGINAGMD-----------TLLVHTGVTKREHMTDDM 241 (266)
T ss_dssp CCCEECSTTSSHHHHHHHHHH---TCCGGGEEEEESCTTTHHHHHHHHTCE-----------EEEECCC------CCTTS
T ss_pred CCccccCCCCHHHHHHHHHHc---CCChhhEEEECCCcHHHHHHHHHCCCe-----------EEEECCCCCChHHHHhcC
Confidence 355677889999999999999 9999999999999 8999999999974 345565542 22
Q ss_pred -ccceEcCChhHHHHHHHH
Q 003025 821 -KAKYYLDDAAEVVTMLEA 838 (856)
Q Consensus 821 -~A~y~l~~~~eV~~~L~~ 838 (856)
.|+|++++..++.+-++.
T Consensus 242 ~~~d~v~~~~~el~~~~~~ 260 (266)
T 3pdw_A 242 EKPTHAIDSLTEWIPYIEG 260 (266)
T ss_dssp CCCSEEESSGGGGHHHHHH
T ss_pred CCCCEEeCCHHHHHHHhhc
Confidence 599999999988877664
|
| >3dzc_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, in diseases, isomerase, center for structural genomics of INFE diseases, csgid; 2.35A {Vibrio cholerae} | Back alignment and structure |
|---|
Probab=99.41 E-value=8.6e-12 Score=140.57 Aligned_cols=251 Identities=16% Similarity=0.140 Sum_probs=157.7
Q ss_pred HHHHHcCCCCCEEEEeCcccchHHHHHHhhcCCCeEEEEEccCCCChHHHhcCCchHHHHHHh--HhCCEEcccCHHHHH
Q 003025 192 RVIEVINPEDDYVWIHDYHLMVLPTFLRRRFTRLRMGFFLHSPFPSSEIYRTLPVREEILKAL--LNADLIGFHTFDYAR 269 (856)
Q Consensus 192 ~i~~~~~~~~D~VwihDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~~~~lp~r~eil~~l--l~~dligf~t~~~~~ 269 (856)
++++..+| |+|++|+.-...+|..+..+..++|++. .|.+..+...+. |+++++.+-+ -.+|++-..+....+
T Consensus 105 ~~l~~~kP--DvVi~~g~~~~~~~~~~aa~~~~IPv~h-~~ag~rs~~~~~--~~~~~~~r~~~~~~a~~~~~~se~~~~ 179 (396)
T 3dzc_A 105 QVLSSEQP--DVVLVHGDTATTFAASLAAYYQQIPVGH-VEAGLRTGNIYS--PWPEEGNRKLTAALTQYHFAPTDTSRA 179 (396)
T ss_dssp HHHHHHCC--SEEEEETTSHHHHHHHHHHHTTTCCEEE-ETCCCCCSCTTS--STTHHHHHHHHHHTCSEEEESSHHHHH
T ss_pred HHHHhcCC--CEEEEECCchhHHHHHHHHHHhCCCEEE-EECCcccccccc--CCcHHHHHHHHHHhcCEEECCCHHHHH
Confidence 34456688 8999998777767766666667888753 444443332222 4556666655 357998888888877
Q ss_pred HHHHHHHhhhCceecccCceeeEEECCEEEEEEEeec-ccCchHHHHHhcCchHHHHHHHHHHHcC----CCe-EEEecc
Q 003025 270 HFLSCCSRMLGLEYQSKRGYIGLEYYGRTVGIKIMPV-GIHMGQIESVLRLADKDWRVQELKQQFE----GKT-VLLGVD 343 (856)
Q Consensus 270 ~Fl~~~~r~lg~~~~~~~~~~~~~~~gr~~~i~i~p~-GId~~~~~~~~~~~~~~~~~~~l~~~~~----~k~-iil~Vd 343 (856)
+|.+ .|+.. + +|.++++ ++|...+..... ........++++++. +++ +++..+
T Consensus 180 ~l~~-----~G~~~--~-------------ki~vvGn~~~d~~~~~~~~~-~~~~~~~~~~r~~lg~l~~~~~~vlv~~h 238 (396)
T 3dzc_A 180 NLLQ-----ENYNA--E-------------NIFVTGNTVIDALLAVREKI-HTDMDLQATLESQFPMLDASKKLILVTGH 238 (396)
T ss_dssp HHHH-----TTCCG--G-------------GEEECCCHHHHHHHHHHHHH-HHCHHHHHHHHHTCTTCCTTSEEEEEECS
T ss_pred HHHH-----cCCCc--C-------------cEEEECCcHHHHHHHhhhhc-ccchhhHHHHHHHhCccCCCCCEEEEEEC
Confidence 7764 24421 1 1223333 555433321100 000011255666653 344 455677
Q ss_pred Cccc-cCCHHHHHHHHHHHHHhCCCCcCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCcccEEEEcCCCC
Q 003025 344 DMDI-FKGVDLKLLAMEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDKPVT 422 (856)
Q Consensus 344 Rld~-~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~~~~lv~~IN~~~~~~~~~pvv~~~~~v~ 422 (856)
|... .||+..+++|++++.+++|+++ +|.++.+ ++ .+++.+++.. + ....+ .+.+++.
T Consensus 239 R~~~~~~~~~~ll~A~~~l~~~~~~~~----~v~~~g~----~~---~~~~~l~~~~---~------~~~~v-~~~~~lg 297 (396)
T 3dzc_A 239 RRESFGGGFERICQALITTAEQHPECQ----ILYPVHL----NP---NVREPVNKLL---K------GVSNI-VLIEPQQ 297 (396)
T ss_dssp CBCCCTTHHHHHHHHHHHHHHHCTTEE----EEEECCB----CH---HHHHHHHHHT---T------TCTTE-EEECCCC
T ss_pred CcccchhHHHHHHHHHHHHHHhCCCce----EEEEeCC----Ch---HHHHHHHHHH---c------CCCCE-EEeCCCC
Confidence 7653 4889999999999999999754 5544322 12 2344444331 1 11234 4556888
Q ss_pred HHHHHHHHHhcceeeeccccccCCCcccceeeeecCCCCCCCCCCCCCCCCceEEec-CCccccccc-CC-ceeeCCCCH
Q 003025 423 LSERAAYYTIAECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVS-EFIGCSPSL-SG-AIRVNPWNI 499 (856)
Q Consensus 423 ~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~g~lV~S-e~~G~~~~l-~~-al~VnP~d~ 499 (856)
..++..+|+.||++|.+| | |++ .||++|+. |+|++ +.++..+.+ .| +++|.+ |.
T Consensus 298 ~~~~~~l~~~ad~vv~~S---G-g~~-~EA~a~G~-----------------PvV~~~~~~~~~e~v~~G~~~lv~~-d~ 354 (396)
T 3dzc_A 298 YLPFVYLMDRAHIILTDS---G-GIQ-EEAPSLGK-----------------PVLVMRETTERPEAVAAGTVKLVGT-NQ 354 (396)
T ss_dssp HHHHHHHHHHCSEEEESC---S-GGG-TTGGGGTC-----------------CEEECCSSCSCHHHHHHTSEEECTT-CH
T ss_pred HHHHHHHHHhcCEEEECC---c-cHH-HHHHHcCC-----------------CEEEccCCCcchHHHHcCceEEcCC-CH
Confidence 889999999999999998 6 555 99999955 88888 566655444 23 566655 89
Q ss_pred HHHHHHHHHHHcC
Q 003025 500 EATAEAMHEAIQM 512 (856)
Q Consensus 500 ~~~A~ai~~aL~m 512 (856)
++++++|.++|+.
T Consensus 355 ~~l~~ai~~ll~d 367 (396)
T 3dzc_A 355 QQICDALSLLLTD 367 (396)
T ss_dssp HHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHcC
Confidence 9999999999974
|
| >3qgm_A P-nitrophenyl phosphatase (PHO2); structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 2.00A {Archaeoglobus fulgidus} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.40 E-value=3.4e-13 Score=143.04 Aligned_cols=72 Identities=22% Similarity=0.320 Sum_probs=59.9
Q ss_pred EeCCCCHHHHHHHHHHHhhhcCCCcceEEEEeCC-chhHHHHHHccccccCCCCCCCccEEEEEeCCCc----c------
Q 003025 752 KPQGVSKGVVAEKIFTTMAESGRHADFVLCIGDD-RSDEDMFEIIGNATSSGVLSSNASVFACTVGQKP----S------ 820 (856)
Q Consensus 752 ~p~gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD~-~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~~----s------ 820 (856)
...+..|+.+++.+++++ |++++++++|||+ .||+.|.+.+|.. .+.|..|+.. .
T Consensus 183 ~~~~kp~~~~~~~~~~~~---~~~~~~~~~vGD~~~~Di~~~~~~g~~-----------~~~v~~g~~~~~~~~~~~~~~ 248 (268)
T 3qgm_A 183 VVVGKPSEVIMREALDIL---GLDAKDVAVVGDQIDVDVAAGKAIGAE-----------TVLVLTGVTTRENLDQMIERH 248 (268)
T ss_dssp EECSTTSHHHHHHHHHHH---TCCGGGEEEEESCTTTHHHHHHHHTCE-----------EEEESSSSCCTTTHHHHHHHH
T ss_pred eecCCCCHHHHHHHHHHh---CCCchhEEEECCCchHHHHHHHHCCCc-----------EEEECCCCCCHHHHHhhcccc
Confidence 556778999999999999 9999999999999 6999999999973 3566667532 1
Q ss_pred --ccceEcCChhHHHHHHH
Q 003025 821 --KAKYYLDDAAEVVTMLE 837 (856)
Q Consensus 821 --~A~y~l~~~~eV~~~L~ 837 (856)
.|+|++++..++.++|+
T Consensus 249 ~~~~d~v~~~~~el~~~l~ 267 (268)
T 3qgm_A 249 GLKPDYVFNSLKDMVEALE 267 (268)
T ss_dssp TCCCSEEESSHHHHHHTC-
T ss_pred CCCCCEEECCHHHHHHHHh
Confidence 68999999999887764
|
| >1k1e_A Deoxy-D-mannose-octulosonate 8-phosphate phosphat; structural genomics, KDO 8-P phosphatase, structure function project, S2F; HET: MES; 1.67A {Haemophilus influenzae RD} SCOP: c.108.1.5 PDB: 1j8d_A* | Back alignment and structure |
|---|
Probab=99.39 E-value=1.9e-12 Score=129.40 Aligned_cols=140 Identities=23% Similarity=0.264 Sum_probs=106.4
Q ss_pred CCcEEEEEecCCCCCCCCCC---C----CCCCHHHHHHHHHHHhhCCCeEEEecCCChhhHHHhhcCCCCccEEeeCCEE
Q 003025 589 SKSRAILFDYDGTVMPQTSI---N----KAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSPCKKLGIAAEHGYF 661 (856)
Q Consensus 589 s~~rlI~~DlDGTLl~~~~~---~----~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~~~~lgliaenG~~ 661 (856)
.++|+|+||+||||++.... . ..+++++.++|++| ++.|+.++|+|||+...+...+..+ ++.. ++
T Consensus 6 ~~ik~i~~DlDGTL~~~~~~~~~~~~~~~~~~~~~~~~l~~L-~~~G~~~~i~Tg~~~~~~~~~~~~l---gl~~---~~ 78 (180)
T 1k1e_A 6 ENIKFVITDVDGVLTDGQLHYDANGEAIKSFHVRDGLGIKML-MDADIQVAVLSGRDSPILRRRIADL---GIKL---FF 78 (180)
T ss_dssp GGCCEEEEECTTTTSCSEEEEETTEEEEEEEEHHHHHHHHHH-HHTTCEEEEEESCCCHHHHHHHHHH---TCCE---EE
T ss_pred hCCeEEEEeCCCCcCCCCeeeccCcceeeeeccchHHHHHHH-HHCCCeEEEEeCCCcHHHHHHHHHc---CCce---ee
Confidence 35899999999999982110 1 13567889999997 7789999999999999888887432 2210 00
Q ss_pred EEeCCCcceEecCCCCcccHHHHHHHHHHHHhhcCCcceEEecccceEEeeecCCCCCCchhHHHHHHHHHHHhcCCCeE
Q 003025 662 MRWSADEEWQNCGQSVDFGWIQIAEPVMKLYTESTDGSYIEIKESALVWHHRDADPGFGSSQAKELLDHLESVLANEPAA 741 (856)
Q Consensus 662 I~~~~~~~w~~~~~~~~~~w~~~v~~i~~~~~~~~~Gs~ie~k~~~l~~~~~~~dp~~~~~~a~el~~~L~~~l~~~~~~ 741 (856)
.+
T Consensus 79 ---~~--------------------------------------------------------------------------- 80 (180)
T 1k1e_A 79 ---LG--------------------------------------------------------------------------- 80 (180)
T ss_dssp ---ES---------------------------------------------------------------------------
T ss_pred ---cC---------------------------------------------------------------------------
Confidence 00
Q ss_pred EEEcCeEEEEEeCCCCHHHHHHHHHHHhhhcCCCcceEEEEeCCchhHHHHHHccccccCCCCCCCccEEEEEeCCC---
Q 003025 742 VKSGQFIVEVKPQGVSKGVVAEKIFTTMAESGRHADFVLCIGDDRSDEDMFEIIGNATSSGVLSSNASVFACTVGQK--- 818 (856)
Q Consensus 742 v~~g~~~vEI~p~gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~--- 818 (856)
..+|+.+++.+++++ +++++++++|||+.||++|++.+|. ++.+++.
T Consensus 81 -------------~k~k~~~~~~~~~~~---~~~~~~~~~vGD~~~Di~~~~~ag~--------------~~~~~~~~~~ 130 (180)
T 1k1e_A 81 -------------KLEKETACFDLMKQA---GVTAEQTAYIGDDSVDLPAFAACGT--------------SFAVADAPIY 130 (180)
T ss_dssp -------------CSCHHHHHHHHHHHH---TCCGGGEEEEECSGGGHHHHHHSSE--------------EEECTTSCHH
T ss_pred -------------CCCcHHHHHHHHHHc---CCCHHHEEEECCCHHHHHHHHHcCC--------------eEEeCCccHH
Confidence 046999999999999 9999999999999999999999985 4566654
Q ss_pred -ccccceEcCC--hhHHH-HHHHHHHHhc
Q 003025 819 -PSKAKYYLDD--AAEVV-TMLEALAEAS 843 (856)
Q Consensus 819 -~s~A~y~l~~--~~eV~-~~L~~L~~~~ 843 (856)
+..|+|++.+ ..+|+ ++++.+...+
T Consensus 131 ~~~~ad~v~~~~~~~g~~~~~~~~~l~~~ 159 (180)
T 1k1e_A 131 VKNAVDHVLSTHGGKGAFREMSDMILQAQ 159 (180)
T ss_dssp HHTTSSEECSSCTTTTHHHHHHHHHHHHT
T ss_pred HHhhCCEEecCCCCCcHHHHHHHHHHHhc
Confidence 3678999865 45677 7777776543
|
| >1vjr_A 4-nitrophenylphosphatase; TM1742, structural genomics, JCSG, protein structure initiative, joint center for structural G hydrolase; 2.40A {Thermotoga maritima} SCOP: c.108.1.14 PDB: 1pw5_A* | Back alignment and structure |
|---|
Probab=99.36 E-value=2.6e-12 Score=136.28 Aligned_cols=210 Identities=13% Similarity=0.127 Sum_probs=121.7
Q ss_pred CCcEEEEEecCCCCCCCCCCCCCCCHHHHHHHHHHHhhCCCeEEEec---CCChhhHHHhhcCCC----CccEEeeCCEE
Q 003025 589 SKSRAILFDYDGTVMPQTSINKAPSQAVISIINTLCNDARNTVFVVS---GRGRDCLGKWFSPCK----KLGIAAEHGYF 661 (856)
Q Consensus 589 s~~rlI~~DlDGTLl~~~~~~~~~s~~~~~aL~~L~~d~g~~V~I~T---GR~~~~l~~~~~~~~----~lgliaenG~~ 661 (856)
.+.+.|+||+||||++ + ..+++.+.++|++| ++.|+.|+++| ||+...+.+.+..+. .-.+++.||+.
T Consensus 15 ~~~~~v~~DlDGTLl~---~-~~~~~~~~~~l~~l-~~~G~~~~~aTn~~gr~~~~~~~~~~~lg~~~~~~~ii~~~~~~ 89 (271)
T 1vjr_A 15 DKIELFILDMDGTFYL---D-DSLLPGSLEFLETL-KEKNKRFVFFTNNSSLGAQDYVRKLRNMGVDVPDDAVVTSGEIT 89 (271)
T ss_dssp GGCCEEEECCBTTTEE---T-TEECTTHHHHHHHH-HHTTCEEEEEESCTTSCHHHHHHHHHHTTCCCCGGGEEEHHHHH
T ss_pred cCCCEEEEcCcCcEEe---C-CEECcCHHHHHHHH-HHcCCeEEEEECCCCCCHHHHHHHHHHcCCCCChhhEEcHHHHH
Confidence 3578999999999998 4 55778899999997 88899999999 999999888885431 01133333322
Q ss_pred EEeC-----CCcceEecCCCCcccHHHHHHHHHHHHhhcCCcceEEecccceEEeeecCCCCCCchhHHHHHHHHHHHhc
Q 003025 662 MRWS-----ADEEWQNCGQSVDFGWIQIAEPVMKLYTESTDGSYIEIKESALVWHHRDADPGFGSSQAKELLDHLESVLA 736 (856)
Q Consensus 662 I~~~-----~~~~w~~~~~~~~~~w~~~v~~i~~~~~~~~~Gs~ie~k~~~l~~~~~~~dp~~~~~~a~el~~~L~~~l~ 736 (856)
+... +...+. ... ..+.+.+..+ |..+............ +.......+.+.++.+. .
T Consensus 90 ~~~~~~~~~~~~~~~----~~~----~~~~~~l~~~-----g~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~l~---~ 151 (271)
T 1vjr_A 90 AEHMLKRFGRCRIFL----LGT----PQLKKVFEAY-----GHVIDEENPDFVVLGF--DKTLTYERLKKACILLR---K 151 (271)
T ss_dssp HHHHHHHHCSCEEEE----ESC----HHHHHHHHHT-----TCEECSSSCSEEEECC--CTTCCHHHHHHHHHHHT---T
T ss_pred HHHHHHhCCCCeEEE----EcC----HHHHHHHHHc-----CCccCCCCCCEEEEeC--CCCcCHHHHHHHHHHHH---C
Confidence 1110 000000 000 0111111111 1111110011111111 11111111222332221 1
Q ss_pred CCCeEEEEcC------------------------eEEEE-EeCCCCHHHHHHHHHHHhhhcCCCcceEEEEeCC-chhHH
Q 003025 737 NEPAAVKSGQ------------------------FIVEV-KPQGVSKGVVAEKIFTTMAESGRHADFVLCIGDD-RSDED 790 (856)
Q Consensus 737 ~~~~~v~~g~------------------------~~vEI-~p~gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD~-~ND~~ 790 (856)
.... +.++. ...|. .+.+.+|+.+++.+++++ |++++++++|||+ .||++
T Consensus 152 ~~~~-i~tn~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~kpk~~~~~~~~~~l---gi~~~e~i~iGD~~~nDi~ 227 (271)
T 1vjr_A 152 GKFY-IATHPDINCPSKEGPVPDAGSIMAAIEASTGRKPDLIAGKPNPLVVDVISEKF---GVPKERMAMVGDRLYTDVK 227 (271)
T ss_dssp TCEE-EESCCCSEECCTTSCEECHHHHHHHHHHHHSCCCSEECSTTSTHHHHHHHHHH---TCCGGGEEEEESCHHHHHH
T ss_pred CCeE-EEECCCccccCCCCccccccHHHHHHHHHhCCCCcccCCCCCHHHHHHHHHHh---CCCCceEEEECCCcHHHHH
Confidence 1111 21111 12344 778899999999999999 9999999999999 59999
Q ss_pred HHHHccccccCCCCCCCccEEEEEeCCCc--------cccceEcCChhHHHHHH
Q 003025 791 MFEIIGNATSSGVLSSNASVFACTVGQKP--------SKAKYYLDDAAEVVTML 836 (856)
Q Consensus 791 Mf~~ag~~~~~~~~~~~~~~~av~vG~~~--------s~A~y~l~~~~eV~~~L 836 (856)
|++.+|.. ++.|..|... ..+.|++++..++.++|
T Consensus 228 ~a~~aG~~-----------~i~v~~g~~~~~~~~~~~~~~~~~i~~l~el~~~l 270 (271)
T 1vjr_A 228 LGKNAGIV-----------SILVLTGETTPEDLERAETKPDFVFKNLGELAKAV 270 (271)
T ss_dssp HHHHHTCE-----------EEEESSSSCCHHHHHHCSSCCSEEESSHHHHHHHH
T ss_pred HHHHcCCe-----------EEEECCCCCCHHHHhhcCCCCCEEECCHHHHHHHh
Confidence 99999974 2344455421 26889999999888765
|
| >2x4d_A HLHPP, phospholysine phosphohistidine inorganic pyrophos phosphatase; hydrolase; 1.92A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.36 E-value=1.2e-12 Score=137.67 Aligned_cols=77 Identities=25% Similarity=0.279 Sum_probs=63.6
Q ss_pred EEEeCCCCHHHHHHHHHHHhhhcCCCcceEEEEeCCc-hhHHHHHHccccccCCCCCCCccEEEEEeCCC--------cc
Q 003025 750 EVKPQGVSKGVVAEKIFTTMAESGRHADFVLCIGDDR-SDEDMFEIIGNATSSGVLSSNASVFACTVGQK--------PS 820 (856)
Q Consensus 750 EI~p~gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~-ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~--------~s 820 (856)
|+.+.+.+|+.+++.+++++ |++++++++|||+. ||++|++.+|.. +..|..|.. ..
T Consensus 184 ~~~~~~kpk~~~~~~~~~~l---gi~~~~~i~iGD~~~nDi~~a~~aG~~-----------~~~v~~g~~~~~~~~~~~~ 249 (271)
T 2x4d_A 184 KAEVVGKPSPEFFKSALQAI---GVEAHQAVMIGDDIVGDVGGAQRCGMR-----------ALQVRTGKFRPSDEHHPEV 249 (271)
T ss_dssp CCEEESTTCHHHHHHHHHHH---TCCGGGEEEEESCTTTTHHHHHHTTCE-----------EEEESSTTCCGGGGGCSSC
T ss_pred ceeeccCCCHHHHHHHHHHh---CCCcceEEEECCCcHHHHHHHHHCCCc-----------EEEEcCCCCCchhhcccCC
Confidence 55778889999999999999 99999999999998 999999999974 345666621 13
Q ss_pred ccceEcCChhHHHHHHHHHH
Q 003025 821 KAKYYLDDAAEVVTMLEALA 840 (856)
Q Consensus 821 ~A~y~l~~~~eV~~~L~~L~ 840 (856)
.|++++++..++.++|..+.
T Consensus 250 ~~~~~~~~~~el~~~l~~~~ 269 (271)
T 2x4d_A 250 KADGYVDNLAEAVDLLLQHA 269 (271)
T ss_dssp CCSEEESSHHHHHHHHHHHC
T ss_pred CCCEEeCCHHHHHHHHHhhc
Confidence 48899999999988876653
|
| >2c4n_A Protein NAGD; nucleotide phosphatase, HAD superfamily, UMP phosphatase, carbohydrate metabolism, hydrolase; 1.8A {Escherichia coli} SCOP: c.108.1.14 | Back alignment and structure |
|---|
Probab=99.35 E-value=5.1e-13 Score=138.38 Aligned_cols=70 Identities=16% Similarity=0.153 Sum_probs=58.5
Q ss_pred EEEEeCCCCHHHHHHHHHHHhhhcCCCcceEEEEeCC-chhHHHHHHccccccCCCCCCCccEEEEEeCCCc--------
Q 003025 749 VEVKPQGVSKGVVAEKIFTTMAESGRHADFVLCIGDD-RSDEDMFEIIGNATSSGVLSSNASVFACTVGQKP-------- 819 (856)
Q Consensus 749 vEI~p~gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD~-~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~~-------- 819 (856)
.|+.+.+.+|+.+++.+++++ |++++++++|||+ .||++|++.+|.. +..|+.|+..
T Consensus 169 ~~~~~~~kpk~~~~~~~~~~l---gi~~~~~i~iGD~~~nDi~~~~~aG~~-----------~~~v~~g~~~~~~~~~~~ 234 (250)
T 2c4n_A 169 RKPFYVGKPSPWIIRAALNKM---QAHSEETVIVGDNLRTDILAGFQAGLE-----------TILVLSGVSSLDDIDSMP 234 (250)
T ss_dssp CCCEECSTTSTHHHHHHHHHH---TCCGGGEEEEESCTTTHHHHHHHTTCE-----------EEEESSSSCCGGGGSSCS
T ss_pred CCceEeCCCCHHHHHHHHHHc---CCCcceEEEECCCchhHHHHHHHcCCe-----------EEEECCCCCChhhhhhcC
Confidence 456789999999999999999 9999999999999 7999999999974 3556667532
Q ss_pred cccceEcCChhHH
Q 003025 820 SKAKYYLDDAAEV 832 (856)
Q Consensus 820 s~A~y~l~~~~eV 832 (856)
..|+|++++..++
T Consensus 235 ~~~~~v~~~~~el 247 (250)
T 2c4n_A 235 FRPSWIYPSVAEI 247 (250)
T ss_dssp SCCSEEESSGGGC
T ss_pred CCCCEEECCHHHh
Confidence 3688888887664
|
| >3epr_A Hydrolase, haloacid dehalogenase-like family; structural genomics, unknown function, HAD superfamily hydro PSI-2; 1.55A {Streptococcus agalactiae serogroup V} SCOP: c.108.1.14 PDB: 1ys9_A 1wvi_A 1ydf_A | Back alignment and structure |
|---|
Probab=99.29 E-value=1e-11 Score=131.62 Aligned_cols=206 Identities=12% Similarity=0.065 Sum_probs=114.1
Q ss_pred CcEEEEEecCCCCCCCCCCCCCCCHHHHHHHHHHHhhCCCeEEEec---CCChhhHHHhhcCCCCccEEeeCCEEEEeCC
Q 003025 590 KSRAILFDYDGTVMPQTSINKAPSQAVISIINTLCNDARNTVFVVS---GRGRDCLGKWFSPCKKLGIAAEHGYFMRWSA 666 (856)
Q Consensus 590 ~~rlI~~DlDGTLl~~~~~~~~~s~~~~~aL~~L~~d~g~~V~I~T---GR~~~~l~~~~~~~~~lgliaenG~~I~~~~ 666 (856)
++|+|+||+||||++ .++.+ +++.++|+++ ++.|+.|+++| ||+...+.+.+.. +++....+.++..++
T Consensus 4 ~~kli~~DlDGTLl~---~~~~i-~~~~eal~~l-~~~G~~vvl~Tn~~gr~~~~~~~~l~~---lg~~~~~~~ii~~~~ 75 (264)
T 3epr_A 4 AYKGYLIDLDGTIYK---GKSRI-PAGERFIERL-QEKGIPYMLVTNNTTRTPESVQEMLRG---FNVETPLETIYTATM 75 (264)
T ss_dssp CCCEEEECCBTTTEE---TTEEC-HHHHHHHHHH-HHHTCCEEEEECCCSSCHHHHHHHHHT---TTCCCCGGGEEEHHH
T ss_pred CCCEEEEeCCCceEe---CCEEC-cCHHHHHHHH-HHCCCeEEEEeCCCCCCHHHHHHHHHH---CCCCCChhheecHHH
Confidence 489999999999999 77778 8999999996 88899999999 8888888887754 333211122222111
Q ss_pred Ccc--------eEecCCCCcccHHHHHHHHHHHHhhcCCcceEEecccceEEeeecCCCCCCchhHHHHHHHHHHHhcCC
Q 003025 667 DEE--------WQNCGQSVDFGWIQIAEPVMKLYTESTDGSYIEIKESALVWHHRDADPGFGSSQAKELLDHLESVLANE 738 (856)
Q Consensus 667 ~~~--------w~~~~~~~~~~w~~~v~~i~~~~~~~~~Gs~ie~k~~~l~~~~~~~dp~~~~~~a~el~~~L~~~l~~~ 738 (856)
... ......... +.+...+..+ |..+........+. ..+..+......+....+.. .
T Consensus 76 ~~~~~l~~~~~~~~~~~~~~----~~l~~~l~~~-----g~~~~~~~~~~v~~--~~~~~~~~~~~~~~~~~l~~----~ 140 (264)
T 3epr_A 76 ATVDYMNDMNRGKTAYVIGE----EGLKKAIADA-----GYVEDTKNPAYVVV--GLDWNVTYDKLATATLAIQN----G 140 (264)
T ss_dssp HHHHHHHHHTCCSEEEEESC----HHHHHHHHHT-----TCEECSSSCSEEEE--CCCTTCCHHHHHHHHHHHHT----T
T ss_pred HHHHHHHHhCCCCeEEEECC----HHHHHHHHHc-----CCcccCCcCCEEEE--eCCCCCCHHHHHHHHHHHHC----C
Confidence 100 000000000 1111111111 11111111111111 11111111112222222211 1
Q ss_pred CeEEEEcC--------e----------------EEEEEeCCCCHHHHHHHHHHHhhhcCCCcceEEEEeCC-chhHHHHH
Q 003025 739 PAAVKSGQ--------F----------------IVEVKPQGVSKGVVAEKIFTTMAESGRHADFVLCIGDD-RSDEDMFE 793 (856)
Q Consensus 739 ~~~v~~g~--------~----------------~vEI~p~gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD~-~ND~~Mf~ 793 (856)
...+.++. . ..|....+-.|+.+++.+++++ |++++++++|||+ .||+.|.+
T Consensus 141 ~~~i~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~~~~~~---~~~~~~~~~vGD~~~~Di~~a~ 217 (264)
T 3epr_A 141 ALFIGTNPDLNIPTERGLLPGAGSLNALLEAATRIKPVFIGKPNAIIMNKALEIL---NIPRNQAVMVGDNYLTDIMAGI 217 (264)
T ss_dssp CEEEESCCCSEEEETTEEEECHHHHHHHHHHHHSCCCEECSTTSHHHHHHHHHHH---TSCGGGEEEEESCTTTHHHHHH
T ss_pred CeEEEEcCCccccCCCceecCccHHHHHHHHHhCCCcccCCCCCHHHHHHHHHHh---CcCcccEEEECCCcHHHHHHHH
Confidence 11111110 0 1133445666778899999999 9999999999999 79999999
Q ss_pred HccccccCCCCCCCccEEEEEeCCCc------c--ccceEcCChhHH
Q 003025 794 IIGNATSSGVLSSNASVFACTVGQKP------S--KAKYYLDDAAEV 832 (856)
Q Consensus 794 ~ag~~~~~~~~~~~~~~~av~vG~~~------s--~A~y~l~~~~eV 832 (856)
.+|.. .+.|..|... . .++|++++..++
T Consensus 218 ~aG~~-----------~~~v~~g~~~~~~~~~~~~~pd~~~~~l~~l 253 (264)
T 3epr_A 218 NNDID-----------TLLVTTGFTTVEEVPDLPIQPSYVLASLDEW 253 (264)
T ss_dssp HHTCE-----------EEEETTSSSCGGGGGGCSSCCSEEESCGGGC
T ss_pred HCCCe-----------EEEECCCCCChHHHHhcCCCCCEEECCHHHH
Confidence 99973 2455556421 1 678888876653
|
| >3ot5_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, center for structural genomics of infec diseases, csgid, alpha beta; HET: PGE; 2.20A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=99.28 E-value=4.9e-11 Score=134.63 Aligned_cols=269 Identities=13% Similarity=0.127 Sum_probs=162.1
Q ss_pred HHHHHcCCCCCEEEEeCcccchHHHHHHhhcCCCeEEEEEccCCCChHHHhcCCchHHHHHHhHh--CCEEcccCHHHHH
Q 003025 192 RVIEVINPEDDYVWIHDYHLMVLPTFLRRRFTRLRMGFFLHSPFPSSEIYRTLPVREEILKALLN--ADLIGFHTFDYAR 269 (856)
Q Consensus 192 ~i~~~~~~~~D~VwihDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~~~~lp~r~eil~~ll~--~dligf~t~~~~~ 269 (856)
++++..+| |+|.+|+.-...++..+..+..++|++ ..+.+.-+...|+ |+++++.+-++. +|++-..+..+.+
T Consensus 108 ~~l~~~kP--D~Vi~~gd~~~~l~~~laA~~~~IPv~-h~~aglrs~~~~~--~~p~~~~r~~~~~~a~~~~~~se~~~~ 182 (403)
T 3ot5_A 108 EVIAAENP--DIVLVHGDTTTSFAAGLATFYQQKMLG-HVEAGLRTWNKYS--PFPEEMNRQLTGVMADIHFSPTKQAKE 182 (403)
T ss_dssp HHHHHHCC--SEEEEETTCHHHHHHHHHHHHTTCEEE-EESCCCCCSCTTS--STTHHHHHHHHHHHCSEEEESSHHHHH
T ss_pred HHHHHcCC--CEEEEECCchhHHHHHHHHHHhCCCEE-EEECCcccccccc--CCcHHHHHHHHHHhcCEEECCCHHHHH
Confidence 34466688 899999976666665555555688874 3444432322322 445666655433 7888888988888
Q ss_pred HHHHHHHhhhCceecccCceeeEEECCEEEEEEEee-cccCchHHHHHhcCchHHHHHHHHHHHcC-CCeEEEeccCccc
Q 003025 270 HFLSCCSRMLGLEYQSKRGYIGLEYYGRTVGIKIMP-VGIHMGQIESVLRLADKDWRVQELKQQFE-GKTVLLGVDDMDI 347 (856)
Q Consensus 270 ~Fl~~~~r~lg~~~~~~~~~~~~~~~gr~~~i~i~p-~GId~~~~~~~~~~~~~~~~~~~l~~~~~-~k~iil~VdRld~ 347 (856)
+|.+ .|+.. + +|.+.+ +++|...+.. ..... .+.++++. ++.+++.++|...
T Consensus 183 ~l~~-----~Gi~~--~-------------~i~vvGn~~~D~~~~~~--~~~~~----~~~~~~l~~~~~vlv~~~r~~~ 236 (403)
T 3ot5_A 183 NLLA-----EGKDP--A-------------TIFVTGNTAIDALKTTV--QKDYH----HPILENLGDNRLILMTAHRREN 236 (403)
T ss_dssp HHHH-----TTCCG--G-------------GEEECCCHHHHHHHHHS--CTTCC----CHHHHSCTTCEEEEECCCCHHH
T ss_pred HHHH-----cCCCc--c-------------cEEEeCCchHHHHHhhh--hhhcc----hHHHHhccCCCEEEEEeCcccc
Confidence 8875 35421 1 122333 3566544321 10000 01222233 3456778888754
Q ss_pred -cCCHHHHHHHHHHHHHhCCCCcCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCcccEEEEcCCCCHHHH
Q 003025 348 -FKGVDLKLLAMEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDKPVTLSER 426 (856)
Q Consensus 348 -~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~~~~lv~~IN~~~~~~~~~pvv~~~~~v~~~el 426 (856)
-|++...++|+.++.+++|+++ +|.++.| ++ .+++.+++.. + ....+ .+.++++..++
T Consensus 237 ~~~~l~~ll~a~~~l~~~~~~~~----~v~~~~~----~~---~~~~~l~~~~---~------~~~~v-~l~~~l~~~~~ 295 (403)
T 3ot5_A 237 LGEPMQGMFEAVREIVESREDTE----LVYPMHL----NP---AVREKAMAIL---G------GHERI-HLIEPLDAIDF 295 (403)
T ss_dssp HTTHHHHHHHHHHHHHHHCTTEE----EEEECCS----CH---HHHHHHHHHH---T------TCTTE-EEECCCCHHHH
T ss_pred cCcHHHHHHHHHHHHHHhCCCce----EEEecCC----CH---HHHHHHHHHh---C------CCCCE-EEeCCCCHHHH
Confidence 3789999999999999999754 5544322 22 2334444321 1 11234 45668888999
Q ss_pred HHHHHhcceeeeccccccCCCcccceeeeecCCCCCCCCCCCCCCCCceEEec-CCccccccc--CCceeeCCCCHHHHH
Q 003025 427 AAYYTIAECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVS-EFIGCSPSL--SGAIRVNPWNIEATA 503 (856)
Q Consensus 427 ~aly~~ADv~vvtS~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~g~lV~S-e~~G~~~~l--~~al~VnP~d~~~~A 503 (856)
..+|+.||++|.+| | | +..||++|+. |+|++ ..++..+.+ ..+++|.+ |.++++
T Consensus 296 ~~l~~~ad~vv~~S---G-g-~~~EA~a~g~-----------------PvV~~~~~~~~~e~v~~g~~~lv~~-d~~~l~ 352 (403)
T 3ot5_A 296 HNFLRKSYLVFTDS---G-G-VQEEAPGMGV-----------------PVLVLRDTTERPEGIEAGTLKLIGT-NKENLI 352 (403)
T ss_dssp HHHHHHEEEEEECC---H-H-HHHHGGGTTC-----------------CEEECCSSCSCHHHHHHTSEEECCS-CHHHHH
T ss_pred HHHHHhcCEEEECC---c-c-HHHHHHHhCC-----------------CEEEecCCCcchhheeCCcEEEcCC-CHHHHH
Confidence 99999999999888 2 3 3399999955 88888 555555545 33677766 999999
Q ss_pred HHHHHHHcCCHHHHHHHHHHHhhhhhcCCHHHH
Q 003025 504 EAMHEAIQMNEAEKQLRHEKHYRYVSTHDVAYW 536 (856)
Q Consensus 504 ~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W 536 (856)
++|.++|+. ++.++.+.+....|-..+...+.
T Consensus 353 ~ai~~ll~~-~~~~~~m~~~~~~~g~~~aa~rI 384 (403)
T 3ot5_A 353 KEALDLLDN-KESHDKMAQAANPYGDGFAANRI 384 (403)
T ss_dssp HHHHHHHHC-HHHHHHHHHSCCTTCCSCHHHHH
T ss_pred HHHHHHHcC-HHHHHHHHhhcCcccCCcHHHHH
Confidence 999999974 33333333333344333333333
|
| >1y8a_A Hypothetical protein AF1437; structural genomics, protein structu initiative, PSI, midwest center for structural genomics; 1.40A {Archaeoglobus fulgidus} SCOP: c.108.1.24 | Back alignment and structure |
|---|
Probab=99.26 E-value=3.5e-14 Score=156.25 Aligned_cols=70 Identities=24% Similarity=0.229 Sum_probs=56.3
Q ss_pred EEE--EEeCCCCHHHHHHHHHHHhhhcCCCcce----EEEEeCCchhHHHHHHc----cccccCCCCCCCccEEEEEeCC
Q 003025 748 IVE--VKPQGVSKGVVAEKIFTTMAESGRHADF----VLCIGDDRSDEDMFEII----GNATSSGVLSSNASVFACTVGQ 817 (856)
Q Consensus 748 ~vE--I~p~gvsKG~al~~Ll~~l~~~gi~~d~----vlaiGD~~ND~~Mf~~a----g~~~~~~~~~~~~~~~av~vG~ 817 (856)
+.| +.|.+++||.+++. +++++ |++|||+.||++||+.+ |. +|+| +
T Consensus 196 ~~e~ii~~~g~~K~~al~g---------i~~~~~~~~via~GDs~NDi~ml~~A~~~~g~--------------~vam-n 251 (332)
T 1y8a_A 196 IVESVKAVGAGEKAKIMRG---------YCESKGIDFPVVVGDSISDYKMFEAARGLGGV--------------AIAF-N 251 (332)
T ss_dssp HHHTCBCCCHHHHHHHHHH---------HHHHHTCSSCEEEECSGGGHHHHHHHHHTTCE--------------EEEE-S
T ss_pred eeeEEecCCCCCHHHHHhc---------cChhhcCceEEEEeCcHhHHHHHHHHhhcCCe--------------EEEe-c
Confidence 445 88999999999983 23566 99999999999999999 85 3455 4
Q ss_pred C----ccccceEcC--ChhHHHHHHHHHHH
Q 003025 818 K----PSKAKYYLD--DAAEVVTMLEALAE 841 (856)
Q Consensus 818 ~----~s~A~y~l~--~~~eV~~~L~~L~~ 841 (856)
. +..|+|++. +.++|+++|+.+..
T Consensus 252 a~~~lk~~Ad~v~~~~~~dGV~~~l~~~~~ 281 (332)
T 1y8a_A 252 GNEYALKHADVVIISPTAMSEAKVIELFME 281 (332)
T ss_dssp CCHHHHTTCSEEEECSSTHHHHHHHHHHHH
T ss_pred CCHHHHhhCcEEecCCCCCHHHHHHHHHHH
Confidence 3 478999985 47899999999874
|
| >3ewi_A N-acylneuraminate cytidylyltransferase; beta barrel, HAD-like, rossmannoid fold, nucleotidyltransferase, nucleus; 1.90A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.22 E-value=6.6e-11 Score=116.93 Aligned_cols=69 Identities=16% Similarity=0.169 Sum_probs=56.2
Q ss_pred CHHHHHHHHHHHhhhcCCCcceEEEEeCCchhHHHHHHccccccCCCCCCCccEEEEEeCCC----ccccceEcCC--hh
Q 003025 757 SKGVVAEKIFTTMAESGRHADFVLCIGDDRSDEDMFEIIGNATSSGVLSSNASVFACTVGQK----PSKAKYYLDD--AA 830 (856)
Q Consensus 757 sKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~----~s~A~y~l~~--~~ 830 (856)
+|+.+++.+++++ |++++++++|||+.||++|++.+|. +++|++. +..|+|++.+ .+
T Consensus 83 ~K~~~l~~~~~~~---gi~~~~~~~vGD~~nDi~~~~~ag~--------------~~a~~na~~~~k~~Ad~v~~~~~~~ 145 (168)
T 3ewi_A 83 DKLATVDEWRKEM---GLCWKEVAYLGNEVSDEECLKRVGL--------------SAVPADACSGAQKAVGYICKCSGGR 145 (168)
T ss_dssp CHHHHHHHHHHHT---TCCGGGEEEECCSGGGHHHHHHSSE--------------EEECTTCCHHHHTTCSEECSSCTTT
T ss_pred ChHHHHHHHHHHc---CcChHHEEEEeCCHhHHHHHHHCCC--------------EEEeCChhHHHHHhCCEEeCCCCCc
Confidence 4999999999999 9999999999999999999999985 5777775 5889999864 34
Q ss_pred H-HHHHHHHHHHh
Q 003025 831 E-VVTMLEALAEA 842 (856)
Q Consensus 831 e-V~~~L~~L~~~ 842 (856)
+ +.++++.+...
T Consensus 146 G~~~~~~~~il~~ 158 (168)
T 3ewi_A 146 GAIREFAEHIFLL 158 (168)
T ss_dssp THHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHh
Confidence 4 45566665543
|
| >2p9j_A Hypothetical protein AQ2171; secsg, riken, PSI, structural GENO protein structure initiative, southeast collaboratory for S genomics; 2.40A {Aquifex aeolicus} | Back alignment and structure |
|---|
Probab=99.20 E-value=5.9e-11 Score=115.92 Aligned_cols=138 Identities=20% Similarity=0.179 Sum_probs=101.9
Q ss_pred CcEEEEEecCCCCCCCCC---C----CCCCCHHHHHHHHHHHhhCCCeEEEecCCChhhHHHhhcCCCCccEEeeCCEEE
Q 003025 590 KSRAILFDYDGTVMPQTS---I----NKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSPCKKLGIAAEHGYFM 662 (856)
Q Consensus 590 ~~rlI~~DlDGTLl~~~~---~----~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~~~~lgliaenG~~I 662 (856)
++|+|+||+||||++... . ...+++.+.++|++| ++.|+.++|+||++...+..++..+ ++. .++
T Consensus 8 ~~k~v~~DlDGTL~~~~~~~~~~~~~~~~~~~~~~~~l~~l-~~~g~~~~i~T~~~~~~~~~~l~~~---gl~---~~~- 79 (162)
T 2p9j_A 8 KLKLLIMDIDGVLTDGKLYYTEHGETIKVFNVLDGIGIKLL-QKMGITLAVISGRDSAPLITRLKEL---GVE---EIY- 79 (162)
T ss_dssp HCCEEEECCTTTTSCSEEEEETTEEEEEEEEHHHHHHHHHH-HTTTCEEEEEESCCCHHHHHHHHHT---TCC---EEE-
T ss_pred ceeEEEEecCcceECCceeecCCCceeeeecccHHHHHHHH-HHCCCEEEEEeCCCcHHHHHHHHHc---CCH---hhc-
Confidence 589999999999997211 0 123467889999997 7789999999999999888888542 221 011
Q ss_pred EeCCCcceEecCCCCcccHHHHHHHHHHHHhhcCCcceEEecccceEEeeecCCCCCCchhHHHHHHHHHHHhcCCCeEE
Q 003025 663 RWSADEEWQNCGQSVDFGWIQIAEPVMKLYTESTDGSYIEIKESALVWHHRDADPGFGSSQAKELLDHLESVLANEPAAV 742 (856)
Q Consensus 663 ~~~~~~~w~~~~~~~~~~w~~~v~~i~~~~~~~~~Gs~ie~k~~~l~~~~~~~dp~~~~~~a~el~~~L~~~l~~~~~~v 742 (856)
.
T Consensus 80 ~------------------------------------------------------------------------------- 80 (162)
T 2p9j_A 80 T------------------------------------------------------------------------------- 80 (162)
T ss_dssp E-------------------------------------------------------------------------------
T ss_pred c-------------------------------------------------------------------------------
Confidence 0
Q ss_pred EEcCeEEEEEeCCCCHHHHHHHHHHHhhhcCCCcceEEEEeCCchhHHHHHHccccccCCCCCCCccEEEEEeCCC----
Q 003025 743 KSGQFIVEVKPQGVSKGVVAEKIFTTMAESGRHADFVLCIGDDRSDEDMFEIIGNATSSGVLSSNASVFACTVGQK---- 818 (856)
Q Consensus 743 ~~g~~~vEI~p~gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~---- 818 (856)
.+..|..+++.+++.+ +++++++++|||+.||++|++.+|. .+.+++.
T Consensus 81 -----------~~kp~~~~~~~~~~~~---~~~~~~~~~vGD~~~Di~~a~~ag~--------------~~~~~~~~~~~ 132 (162)
T 2p9j_A 81 -----------GSYKKLEIYEKIKEKY---SLKDEEIGFIGDDVVDIEVMKKVGF--------------PVAVRNAVEEV 132 (162)
T ss_dssp -----------CC--CHHHHHHHHHHT---TCCGGGEEEEECSGGGHHHHHHSSE--------------EEECTTSCHHH
T ss_pred -----------CCCCCHHHHHHHHHHc---CCCHHHEEEECCCHHHHHHHHHCCC--------------eEEecCccHHH
Confidence 0234899999999999 9999999999999999999999986 3445443
Q ss_pred ccccceEcCChh--HHH-HHHHHHHHh
Q 003025 819 PSKAKYYLDDAA--EVV-TMLEALAEA 842 (856)
Q Consensus 819 ~s~A~y~l~~~~--eV~-~~L~~L~~~ 842 (856)
...|+|++++.. +++ ++++.+.+.
T Consensus 133 ~~~a~~v~~~~~~~g~~~~~~~~~~~~ 159 (162)
T 2p9j_A 133 RKVAVYITQRNGGEGALREVAELIHFL 159 (162)
T ss_dssp HHHCSEECSSCSSSSHHHHHHHHHHHH
T ss_pred HhhCCEEecCCCCCcHHHHHHHHHHHh
Confidence 356889987653 444 777777654
|
| >3mmz_A Putative HAD family hydrolase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.84A {Streptomyces avermitilis} | Back alignment and structure |
|---|
Probab=99.19 E-value=3.2e-11 Score=120.05 Aligned_cols=69 Identities=16% Similarity=0.209 Sum_probs=55.4
Q ss_pred CCHHHHHHHHHHHhhhcCCCcceEEEEeCCchhHHHHHHccccccCCCCCCCccEEEEEeCCC----ccccceEcCC--h
Q 003025 756 VSKGVVAEKIFTTMAESGRHADFVLCIGDDRSDEDMFEIIGNATSSGVLSSNASVFACTVGQK----PSKAKYYLDD--A 829 (856)
Q Consensus 756 vsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~----~s~A~y~l~~--~ 829 (856)
.+|+.+++.+++++ |++++++++|||+.||++|++.+|. ++++|+. +..|+|++.+ .
T Consensus 85 ~~k~~~l~~~~~~~---~~~~~~~~~vGD~~nD~~~~~~ag~--------------~v~~~~~~~~~~~~ad~v~~~~~~ 147 (176)
T 3mmz_A 85 DRKDLALKQWCEEQ---GIAPERVLYVGNDVNDLPCFALVGW--------------PVAVASAHDVVRGAARAVTTVPGG 147 (176)
T ss_dssp SCHHHHHHHHHHHH---TCCGGGEEEEECSGGGHHHHHHSSE--------------EEECTTCCHHHHHHSSEECSSCTT
T ss_pred CChHHHHHHHHHHc---CCCHHHEEEEcCCHHHHHHHHHCCC--------------eEECCChhHHHHHhCCEEecCCCC
Confidence 56999999999999 9999999999999999999999984 5777764 3678888864 4
Q ss_pred hHHHHHHHHHHH
Q 003025 830 AEVVTMLEALAE 841 (856)
Q Consensus 830 ~eV~~~L~~L~~ 841 (856)
+++++.+..+..
T Consensus 148 ~g~~~~l~~~l~ 159 (176)
T 3mmz_A 148 DGAIREIASWIL 159 (176)
T ss_dssp TTHHHHHHHHHH
T ss_pred CcHHHHHHHHHH
Confidence 555555554443
|
| >2r8e_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; YRBI, divalent metal, HAD superfamily, KDO 8-P, hydrolase; 1.40A {Escherichia coli O6} PDB: 2r8x_A 2r8y_A 2r8z_A 3hyc_A 3i6b_A* | Back alignment and structure |
|---|
Probab=99.16 E-value=1.6e-10 Score=116.26 Aligned_cols=145 Identities=19% Similarity=0.194 Sum_probs=105.2
Q ss_pred HHcCCcEEEEEecCCCCCCCCC---CCC----CCCHHHHHHHHHHHhhCCCeEEEecCCChhhHHHhhcCCCCccEEeeC
Q 003025 586 YLRSKSRAILFDYDGTVMPQTS---INK----APSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSPCKKLGIAAEH 658 (856)
Q Consensus 586 y~~s~~rlI~~DlDGTLl~~~~---~~~----~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~~~~lgliaen 658 (856)
++..++|+|+||+||||++... ... ........+|++| ++.|+.++|+||++...+..++.. +++.
T Consensus 21 ~~~~~ik~vifD~DGTL~~~~~~~~~~~~~~~~~~~~d~~~l~~L-~~~g~~v~ivT~~~~~~~~~~l~~---lgl~--- 93 (188)
T 2r8e_A 21 AKAENIRLLILDVDGVLSDGLIYMGNNGEELKAFNVRDGYGIRCA-LTSDIEVAIITGRKAKLVEDRCAT---LGIT--- 93 (188)
T ss_dssp HHHHTCSEEEECCCCCCBCSEEEEETTSCEEEEEEHHHHHHHHHH-HTTTCEEEEECSSCCHHHHHHHHH---HTCC---
T ss_pred HHHhcCCEEEEeCCCCcCCCCEEecCCCcEEEEeecccHHHHHHH-HHCCCeEEEEeCCChHHHHHHHHH---cCCc---
Confidence 3556899999999999997210 011 1233344578887 778999999999999888887743 2221
Q ss_pred CEEEEeCCCcceEecCCCCcccHHHHHHHHHHHHhhcCCcceEEecccceEEeeecCCCCCCchhHHHHHHHHHHHhcCC
Q 003025 659 GYFMRWSADEEWQNCGQSVDFGWIQIAEPVMKLYTESTDGSYIEIKESALVWHHRDADPGFGSSQAKELLDHLESVLANE 738 (856)
Q Consensus 659 G~~I~~~~~~~w~~~~~~~~~~w~~~v~~i~~~~~~~~~Gs~ie~k~~~l~~~~~~~dp~~~~~~a~el~~~L~~~l~~~ 738 (856)
.++
T Consensus 94 ~~~----------------------------------------------------------------------------- 96 (188)
T 2r8e_A 94 HLY----------------------------------------------------------------------------- 96 (188)
T ss_dssp EEE-----------------------------------------------------------------------------
T ss_pred eee-----------------------------------------------------------------------------
Confidence 000
Q ss_pred CeEEEEcCeEEEEEeCCCCHHHHHHHHHHHhhhcCCCcceEEEEeCCchhHHHHHHccccccCCCCCCCccEEEEEeCCC
Q 003025 739 PAAVKSGQFIVEVKPQGVSKGVVAEKIFTTMAESGRHADFVLCIGDDRSDEDMFEIIGNATSSGVLSSNASVFACTVGQK 818 (856)
Q Consensus 739 ~~~v~~g~~~vEI~p~gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~ 818 (856)
+.+..|+.+++.+++++ |++++++++|||+.||++|++.+|. ++.+++.
T Consensus 97 --------------~~~kpk~~~~~~~~~~~---g~~~~~~~~iGD~~~Di~~a~~ag~--------------~~~~~~~ 145 (188)
T 2r8e_A 97 --------------QGQSNKLIAFSDLLEKL---AIAPENVAYVGDDLIDWPVMEKVGL--------------SVAVADA 145 (188)
T ss_dssp --------------CSCSCSHHHHHHHHHHH---TCCGGGEEEEESSGGGHHHHTTSSE--------------EEECTTS
T ss_pred --------------cCCCCCHHHHHHHHHHc---CCCHHHEEEECCCHHHHHHHHHCCC--------------EEEecCc
Confidence 01345999999999999 9999999999999999999999985 3556543
Q ss_pred ----ccccceEcCCh--hHHH-HHHHHHHHhcCC
Q 003025 819 ----PSKAKYYLDDA--AEVV-TMLEALAEASAP 845 (856)
Q Consensus 819 ----~s~A~y~l~~~--~eV~-~~L~~L~~~~~~ 845 (856)
+..|+|++++. .+++ ++++.+......
T Consensus 146 ~~~~~~~ad~v~~~~~~~g~~~~~l~~ll~~~~~ 179 (188)
T 2r8e_A 146 HPLLIPRADYVTRIAGGRGAVREVCDLLLLAQGK 179 (188)
T ss_dssp CTTTGGGSSEECSSCTTTTHHHHHHHHHHHHTTC
T ss_pred CHHHHhcCCEEEeCCCCCcHHHHHHHHHHHhcCc
Confidence 35688998764 4555 888888776543
|
| >2ho4_A Haloacid dehalogenase-like hydrolase domain containing 2; HDHD2, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; 2.20A {Mus musculus} PDB: 3hlt_A | Back alignment and structure |
|---|
Probab=99.12 E-value=5.5e-10 Score=116.99 Aligned_cols=72 Identities=15% Similarity=0.103 Sum_probs=57.9
Q ss_pred eCCCCHHHHHHHHHHHhhhcCCCcceEEEEeCCc-hhHHHHHHccccccCCCCCCCccEEEEEeCCC--------ccccc
Q 003025 753 PQGVSKGVVAEKIFTTMAESGRHADFVLCIGDDR-SDEDMFEIIGNATSSGVLSSNASVFACTVGQK--------PSKAK 823 (856)
Q Consensus 753 p~gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~-ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~--------~s~A~ 823 (856)
..+-.|+.+++.+++++ |++++++++|||+. ||+.|++.+|.. ++.|..|.. ...++
T Consensus 176 ~~~Kp~~~~~~~~~~~l---gi~~~~~~~iGD~~~~Di~~a~~aG~~-----------~i~v~~g~~~~~~~~~~~~~~~ 241 (259)
T 2ho4_A 176 VVGKPEKTFFLEALRDA---DCAPEEAVMIGDDCRDDVDGAQNIGML-----------GILVKTGKYKAADEEKINPPPY 241 (259)
T ss_dssp ECSTTSHHHHHHHGGGG---TCCGGGEEEEESCTTTTHHHHHHTTCE-----------EEEESSTTCCTTGGGGSSSCCS
T ss_pred EecCCCHHHHHHHHHHc---CCChHHEEEECCCcHHHHHHHHHCCCc-----------EEEECCCCCCcccccccCCCCC
Confidence 34567899999999999 99999999999998 999999999973 244555521 24578
Q ss_pred eEcCChhHHHHHHHH
Q 003025 824 YYLDDAAEVVTMLEA 838 (856)
Q Consensus 824 y~l~~~~eV~~~L~~ 838 (856)
+++++..++.++|..
T Consensus 242 ~~~~~l~~l~~~l~~ 256 (259)
T 2ho4_A 242 LTCESFPHAVDHILQ 256 (259)
T ss_dssp EEESCHHHHHHHHHH
T ss_pred EEECCHHHHHHHHHH
Confidence 899999998887754
|
| >3e8m_A Acylneuraminate cytidylyltransferase; 2-keto-3-deoxynononic acid 9-phosphate phosphohydrolase, nucleotidyltransferase; HET: PEG PG4 EDO PGE; 1.10A {Bacteroides thetaiotaomicron} PDB: 3e84_A 3e81_A* | Back alignment and structure |
|---|
Probab=99.11 E-value=9.2e-11 Score=114.76 Aligned_cols=137 Identities=18% Similarity=0.203 Sum_probs=98.0
Q ss_pred CCcEEEEEecCCCCCCCCC---CCC----CCCHHHHHHHHHHHhhCCCeEEEecCCChhhHHHhhcCCCCccEEeeCCEE
Q 003025 589 SKSRAILFDYDGTVMPQTS---INK----APSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSPCKKLGIAAEHGYF 661 (856)
Q Consensus 589 s~~rlI~~DlDGTLl~~~~---~~~----~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~~~~lgliaenG~~ 661 (856)
+++|+|+||+||||++... ... ........+|+.| ++.|+.++|+||++...+...+..+ ++. .++
T Consensus 2 ~~ik~vifD~DGTL~~~~~~~~~~~~~~~~~~~~~~~~l~~l-~~~g~~~~i~T~~~~~~~~~~~~~~---gl~---~~~ 74 (164)
T 3e8m_A 2 KEIKLILTDIDGVWTDGGMFYDQTGNEWKKFNTSDSAGIFWA-HNKGIPVGILTGEKTEIVRRRAEKL---KVD---YLF 74 (164)
T ss_dssp CCCCEEEECSTTTTSSSEEEECSSSCEEEEEEGGGHHHHHHH-HHTTCCEEEECSSCCHHHHHHHHHT---TCS---EEE
T ss_pred CcceEEEEcCCCceEcCcEEEcCCCcEEEEecCChHHHHHHH-HHCCCEEEEEeCCChHHHHHHHHHc---CCC---Eee
Confidence 3689999999999998220 011 1111122357776 6779999999999999888888543 221 000
Q ss_pred EEeCCCcceEecCCCCcccHHHHHHHHHHHHhhcCCcceEEecccceEEeeecCCCCCCchhHHHHHHHHHHHhcCCCeE
Q 003025 662 MRWSADEEWQNCGQSVDFGWIQIAEPVMKLYTESTDGSYIEIKESALVWHHRDADPGFGSSQAKELLDHLESVLANEPAA 741 (856)
Q Consensus 662 I~~~~~~~w~~~~~~~~~~w~~~v~~i~~~~~~~~~Gs~ie~k~~~l~~~~~~~dp~~~~~~a~el~~~L~~~l~~~~~~ 741 (856)
..
T Consensus 75 ---~~--------------------------------------------------------------------------- 76 (164)
T 3e8m_A 75 ---QG--------------------------------------------------------------------------- 76 (164)
T ss_dssp ---CS---------------------------------------------------------------------------
T ss_pred ---cc---------------------------------------------------------------------------
Confidence 00
Q ss_pred EEEcCeEEEEEeCCCCHHHHHHHHHHHhhhcCCCcceEEEEeCCchhHHHHHHccccccCCCCCCCccEEEEEeCCC---
Q 003025 742 VKSGQFIVEVKPQGVSKGVVAEKIFTTMAESGRHADFVLCIGDDRSDEDMFEIIGNATSSGVLSSNASVFACTVGQK--- 818 (856)
Q Consensus 742 v~~g~~~vEI~p~gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~--- 818 (856)
+ -.|+.+++.+++++ +++++++++|||+.||++|++.+|. ++.+++.
T Consensus 77 ---------~----kpk~~~~~~~~~~~---~~~~~~~~~vGD~~~Di~~~~~ag~--------------~~~~~~~~~~ 126 (164)
T 3e8m_A 77 ---------V----VDKLSAAEELCNEL---GINLEQVAYIGDDLNDAKLLKRVGI--------------AGVPASAPFY 126 (164)
T ss_dssp ---------C----SCHHHHHHHHHHHH---TCCGGGEEEECCSGGGHHHHTTSSE--------------EECCTTSCHH
T ss_pred ---------c----CChHHHHHHHHHHc---CCCHHHEEEECCCHHHHHHHHHCCC--------------eEEcCChHHH
Confidence 1 34999999999999 9999999999999999999999985 4556654
Q ss_pred -ccccceEcCCh--hH-HHHHHHHHH
Q 003025 819 -PSKAKYYLDDA--AE-VVTMLEALA 840 (856)
Q Consensus 819 -~s~A~y~l~~~--~e-V~~~L~~L~ 840 (856)
+..|+|++.+. .+ +.++++.+.
T Consensus 127 ~~~~ad~v~~~~~~~g~~~e~~~~ll 152 (164)
T 3e8m_A 127 IRRLSTIFLEKRGGEGVFREFVEKVL 152 (164)
T ss_dssp HHTTCSSCCCCCTTTTHHHHHHHHHT
T ss_pred HHHhCcEEeccCCCCcHHHHHHHHHH
Confidence 46788988653 33 777777765
|
| >3n07_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; structural genomics, phosphatase, PSI-2, protein structure initiative; HET: MSE; 1.76A {Vibrio cholerae} | Back alignment and structure |
|---|
Probab=99.11 E-value=8.8e-11 Score=119.02 Aligned_cols=142 Identities=16% Similarity=0.139 Sum_probs=100.1
Q ss_pred cCCcEEEEEecCCCCCCCCC---C----CCCCCHHHHHHHHHHHhhCCCeEEEecCCChhhHHHhhcCCCCccEEeeCCE
Q 003025 588 RSKSRAILFDYDGTVMPQTS---I----NKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSPCKKLGIAAEHGY 660 (856)
Q Consensus 588 ~s~~rlI~~DlDGTLl~~~~---~----~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~~~~lgliaenG~ 660 (856)
..++|+|+||+||||++... . -.........+|+.| ++.|+.++|+||++...+...+..+ ++..
T Consensus 22 ~~~ik~vifD~DGtL~d~~~~~~~~~~~~~~~~~~d~~~l~~L-~~~G~~~~ivT~~~~~~~~~~l~~l---gi~~---- 93 (195)
T 3n07_A 22 AKQIKLLICDVDGVFSDGLIYMGNQGEELKTFHTRDGYGVKAL-MNAGIEIAIITGRRSQIVENRMKAL---GISL---- 93 (195)
T ss_dssp HHTCCEEEECSTTTTSCSCCEECTTSCEECCCCTTHHHHHHHH-HHTTCEEEEECSSCCHHHHHHHHHT---TCCE----
T ss_pred HhCCCEEEEcCCCCcCCCcEEEccCchhhheeecccHHHHHHH-HHCCCEEEEEECcCHHHHHHHHHHc---CCcE----
Confidence 34689999999999998211 0 112222333458886 7789999999999888887777432 2100
Q ss_pred EEEeCCCcceEecCCCCcccHHHHHHHHHHHHhhcCCcceEEecccceEEeeecCCCCCCchhHHHHHHHHHHHhcCCCe
Q 003025 661 FMRWSADEEWQNCGQSVDFGWIQIAEPVMKLYTESTDGSYIEIKESALVWHHRDADPGFGSSQAKELLDHLESVLANEPA 740 (856)
Q Consensus 661 ~I~~~~~~~w~~~~~~~~~~w~~~v~~i~~~~~~~~~Gs~ie~k~~~l~~~~~~~dp~~~~~~a~el~~~L~~~l~~~~~ 740 (856)
+ +. .
T Consensus 94 ---------------------------------------~-----------~~-~------------------------- 97 (195)
T 3n07_A 94 ---------------------------------------I-----------YQ-G------------------------- 97 (195)
T ss_dssp ---------------------------------------E-----------EC-S-------------------------
T ss_pred ---------------------------------------E-----------ee-C-------------------------
Confidence 0 00 0
Q ss_pred EEEEcCeEEEEEeCCCCHHHHHHHHHHHhhhcCCCcceEEEEeCCchhHHHHHHccccccCCCCCCCccEEEEEeCCC--
Q 003025 741 AVKSGQFIVEVKPQGVSKGVVAEKIFTTMAESGRHADFVLCIGDDRSDEDMFEIIGNATSSGVLSSNASVFACTVGQK-- 818 (856)
Q Consensus 741 ~v~~g~~~vEI~p~gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~-- 818 (856)
.-+|+.+++.+++++ |++++++++|||+.||++|++.+|. ++++|+.
T Consensus 98 --------------~k~k~~~~~~~~~~~---~~~~~~~~~vGD~~nDi~~~~~ag~--------------~va~~na~~ 146 (195)
T 3n07_A 98 --------------QDDKVQAYYDICQKL---AIAPEQTGYIGDDLIDWPVMEKVAL--------------RVCVADGHP 146 (195)
T ss_dssp --------------CSSHHHHHHHHHHHH---CCCGGGEEEEESSGGGHHHHTTSSE--------------EEECTTSCH
T ss_pred --------------CCCcHHHHHHHHHHh---CCCHHHEEEEcCCHHHHHHHHHCCC--------------EEEECChHH
Confidence 035999999999999 9999999999999999999999984 5778775
Q ss_pred --ccccceEcCC--hhH-HHHHHHHHHHhcC
Q 003025 819 --PSKAKYYLDD--AAE-VVTMLEALAEASA 844 (856)
Q Consensus 819 --~s~A~y~l~~--~~e-V~~~L~~L~~~~~ 844 (856)
+..|+|++.+ .++ +.++++.+.+...
T Consensus 147 ~~~~~ad~v~~~~~~~G~~~~~~~~il~~~~ 177 (195)
T 3n07_A 147 LLAQRANYVTHIKGGHGAVREVCDLILQARN 177 (195)
T ss_dssp HHHHHCSEECSSCTTTTHHHHHHHHHHHHTT
T ss_pred HHHHhCCEEEcCCCCCCHHHHHHHHHHHhcc
Confidence 4678998864 345 4455555555443
|
| >3mn1_A Probable YRBI family phosphatase; structural genomics, PSI, protein structure initiative, NYSG phosphatase; 1.80A {Pseudomonas syringae PV} PDB: 3nrj_A | Back alignment and structure |
|---|
Probab=99.10 E-value=2.5e-10 Score=114.93 Aligned_cols=56 Identities=21% Similarity=0.229 Sum_probs=49.0
Q ss_pred CCHHHHHHHHHHHhhhcCCCcceEEEEeCCchhHHHHHHccccccCCCCCCCccEEEEEeCCC----ccccceEcCC
Q 003025 756 VSKGVVAEKIFTTMAESGRHADFVLCIGDDRSDEDMFEIIGNATSSGVLSSNASVFACTVGQK----PSKAKYYLDD 828 (856)
Q Consensus 756 vsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~----~s~A~y~l~~ 828 (856)
.+|+.+++.+++++ |++++++++|||+.||++|++.+|. ++++|+. +..|+|++.+
T Consensus 93 ~~K~~~~~~~~~~~---g~~~~~~~~vGD~~nDi~~~~~ag~--------------~~~~~~~~~~~~~~ad~v~~~ 152 (189)
T 3mn1_A 93 EDKLVVLDKLLAEL---QLGYEQVAYLGDDLPDLPVIRRVGL--------------GMAVANAASFVREHAHGITRA 152 (189)
T ss_dssp SCHHHHHHHHHHHH---TCCGGGEEEEECSGGGHHHHHHSSE--------------EEECTTSCHHHHHTSSEECSS
T ss_pred CChHHHHHHHHHHc---CCChhHEEEECCCHHHHHHHHHCCC--------------eEEeCCccHHHHHhCCEEecC
Confidence 56999999999999 9999999999999999999999985 5777764 3568898865
|
| >2oyc_A PLP phosphatase, pyridoxal phosphate phosphatase; structural genomics, NYSGXRC, NEW YORK SGX research center for structural genomics, PSI-2; 1.72A {Homo sapiens} PDB: 2p27_A 2p69_A* 2cft_A* 2cfs_A 2cfr_A* | Back alignment and structure |
|---|
Probab=99.10 E-value=1.1e-10 Score=126.42 Aligned_cols=72 Identities=19% Similarity=0.180 Sum_probs=55.8
Q ss_pred EeCCCCHHHHHHHHHHHhhhcCCCcceEEEEeCCc-hhHHHHHHccccccCCCCCCCccEEEEEeCCCc-----------
Q 003025 752 KPQGVSKGVVAEKIFTTMAESGRHADFVLCIGDDR-SDEDMFEIIGNATSSGVLSSNASVFACTVGQKP----------- 819 (856)
Q Consensus 752 ~p~gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~-ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~~----------- 819 (856)
...+..|+.+++.+++++ |++++++++|||+. ||+.|.+.+|.. ++.|..|...
T Consensus 211 ~~~~KP~~~~~~~~~~~l---gi~~~e~l~vGD~~~~Di~~a~~aG~~-----------~i~v~~g~~~~~~~~~~~~~~ 276 (306)
T 2oyc_A 211 LVVGKPSPYMFECITENF---SIDPARTLMVGDRLETDILFGHRCGMT-----------TVLTLTGVSRLEEAQAYLAAG 276 (306)
T ss_dssp EECSTTSTHHHHHHHHHS---CCCGGGEEEEESCTTTHHHHHHHHTCE-----------EEEESSSSCCHHHHHHHHHTT
T ss_pred eeeCCCCHHHHHHHHHHc---CCChHHEEEECCCchHHHHHHHHCCCe-----------EEEECCCCCCHHHHHhhhccc
Confidence 356777889999999999 99999999999995 999999999974 2344445321
Q ss_pred ---cccceEcCChhHHHHHHH
Q 003025 820 ---SKAKYYLDDAAEVVTMLE 837 (856)
Q Consensus 820 ---s~A~y~l~~~~eV~~~L~ 837 (856)
..++|++++..++.++|+
T Consensus 277 ~~~~~pd~vi~~l~el~~~l~ 297 (306)
T 2oyc_A 277 QHDLVPHYYVESIADLTEGLE 297 (306)
T ss_dssp CGGGSCSEEESSGGGGGGGC-
T ss_pred ccCCCCCEEECCHHHHHHHHH
Confidence 357888888887766554
|
| >3kzx_A HAD-superfamily hydrolase, subfamily IA, variant; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ehrlich chaffeensis; 1.90A {Ehrlichia chaffeensis} | Back alignment and structure |
|---|
Probab=99.09 E-value=4.3e-10 Score=115.53 Aligned_cols=73 Identities=15% Similarity=0.082 Sum_probs=60.7
Q ss_pred eCCCCHHHHHHHHHHHhhhcCCCcc-eEEEEeCCchhHHHHHHccccccCCCCCCCccEEEEEeCCCc-cccceEcCChh
Q 003025 753 PQGVSKGVVAEKIFTTMAESGRHAD-FVLCIGDDRSDEDMFEIIGNATSSGVLSSNASVFACTVGQKP-SKAKYYLDDAA 830 (856)
Q Consensus 753 p~gvsKG~al~~Ll~~l~~~gi~~d-~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~~-s~A~y~l~~~~ 830 (856)
..+..|+.+++.+++++ |++++ ++++|||+.||+.|++.+|. -+|.+|+.. ..+.+.+++..
T Consensus 156 ~~~Kp~~~~~~~~~~~l---gi~~~~~~v~vGD~~~Di~~a~~aG~-------------~~v~~~~~~~~~~~~~~~~~~ 219 (231)
T 3kzx_A 156 GTIKPSPEPVLAALTNI---NIEPSKEVFFIGDSISDIQSAIEAGC-------------LPIKYGSTNIIKDILSFKNFY 219 (231)
T ss_dssp SCCTTSSHHHHHHHHHH---TCCCSTTEEEEESSHHHHHHHHHTTC-------------EEEEECC-----CCEEESSHH
T ss_pred CCCCCChHHHHHHHHHc---CCCcccCEEEEcCCHHHHHHHHHCCC-------------eEEEECCCCCCCCceeeCCHH
Confidence 34556789999999999 99998 99999999999999999996 367788764 47888999999
Q ss_pred HHHHHHHHHHH
Q 003025 831 EVVTMLEALAE 841 (856)
Q Consensus 831 eV~~~L~~L~~ 841 (856)
++.++|.++.+
T Consensus 220 el~~~l~~~l~ 230 (231)
T 3kzx_A 220 DIRNFICQLIN 230 (231)
T ss_dssp HHHHHHHHHHC
T ss_pred HHHHHHHHHhc
Confidence 99999998864
|
| >3n1u_A Hydrolase, HAD superfamily, subfamily III A; structural genomics, PSI-2; 1.80A {Legionella pneumophila} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.09 E-value=1.6e-10 Score=116.60 Aligned_cols=135 Identities=19% Similarity=0.183 Sum_probs=95.6
Q ss_pred CCcEEEEEecCCCCCCCCC---C----CCCCCHHHHHHHHHHHhhCCCeEEEecCCChhhHHHhhcCCCCccEEeeCCEE
Q 003025 589 SKSRAILFDYDGTVMPQTS---I----NKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSPCKKLGIAAEHGYF 661 (856)
Q Consensus 589 s~~rlI~~DlDGTLl~~~~---~----~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~~~~lgliaenG~~ 661 (856)
..+|+++||+||||++... . -......--.+|+.| ++.|+.++|+||++...+...+.. +++..
T Consensus 17 ~~ik~vifD~DGtL~~~~~~~~~~~~~~~~~~~~d~~~l~~L-~~~g~~~~ivTn~~~~~~~~~l~~---lgl~~----- 87 (191)
T 3n1u_A 17 KKIKCLICDVDGVLSDGLLHIDNHGNELKSFHVQDGMGLKLL-MAAGIQVAIITTAQNAVVDHRMEQ---LGITH----- 87 (191)
T ss_dssp HTCSEEEECSTTTTBCSCCEECTTCCEECCBCHHHHHHHHHH-HHTTCEEEEECSCCSHHHHHHHHH---HTCCE-----
T ss_pred hcCCEEEEeCCCCCCCCceeecCCchhhhhccccChHHHHHH-HHCCCeEEEEeCcChHHHHHHHHH---cCCcc-----
Confidence 4689999999999997221 0 111222223358887 778999999999998888777743 22210
Q ss_pred EEeCCCcceEecCCCCcccHHHHHHHHHHHHhhcCCcceEEecccceEEeeecCCCCCCchhHHHHHHHHHHHhcCCCeE
Q 003025 662 MRWSADEEWQNCGQSVDFGWIQIAEPVMKLYTESTDGSYIEIKESALVWHHRDADPGFGSSQAKELLDHLESVLANEPAA 741 (856)
Q Consensus 662 I~~~~~~~w~~~~~~~~~~w~~~v~~i~~~~~~~~~Gs~ie~k~~~l~~~~~~~dp~~~~~~a~el~~~L~~~l~~~~~~ 741 (856)
+. . ..
T Consensus 88 ~~-~----------~~---------------------------------------------------------------- 92 (191)
T 3n1u_A 88 YY-K----------GQ---------------------------------------------------------------- 92 (191)
T ss_dssp EE-C----------SC----------------------------------------------------------------
T ss_pred ce-e----------CC----------------------------------------------------------------
Confidence 00 0 00
Q ss_pred EEEcCeEEEEEeCCCCHHHHHHHHHHHhhhcCCCcceEEEEeCCchhHHHHHHccccccCCCCCCCccEEEEEeCCC---
Q 003025 742 VKSGQFIVEVKPQGVSKGVVAEKIFTTMAESGRHADFVLCIGDDRSDEDMFEIIGNATSSGVLSSNASVFACTVGQK--- 818 (856)
Q Consensus 742 v~~g~~~vEI~p~gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~--- 818 (856)
.+|+.+++.+++++ +++++++++|||+.||++|++.+|. ++++++.
T Consensus 93 --------------kpk~~~~~~~~~~~---~~~~~~~~~vGD~~~Di~~~~~ag~--------------~~~~~~~~~~ 141 (191)
T 3n1u_A 93 --------------VDKRSAYQHLKKTL---GLNDDEFAYIGDDLPDLPLIQQVGL--------------GVAVSNAVPQ 141 (191)
T ss_dssp --------------SSCHHHHHHHHHHH---TCCGGGEEEEECSGGGHHHHHHSSE--------------EEECTTCCHH
T ss_pred --------------CChHHHHHHHHHHh---CCCHHHEEEECCCHHHHHHHHHCCC--------------EEEeCCccHH
Confidence 35999999999999 9999999999999999999999985 4677765
Q ss_pred -ccccceEcCC--hhHHHHHHHH
Q 003025 819 -PSKAKYYLDD--AAEVVTMLEA 838 (856)
Q Consensus 819 -~s~A~y~l~~--~~eV~~~L~~ 838 (856)
+..|+|++.+ .++++..|..
T Consensus 142 ~~~~ad~v~~~~~~~g~~~~l~~ 164 (191)
T 3n1u_A 142 VLEFADWRTERTGGRGAVRELCD 164 (191)
T ss_dssp HHHHSSEECSSCTTTTHHHHHHH
T ss_pred HHHhCCEEecCCCCCcHHHHHHH
Confidence 3678899865 3444443333
|
| >1l7m_A Phosphoserine phosphatase; rossmann fold, four-helix bundle, B-hairpin, structural genomics, BSGC structure funded by NIH; 1.48A {Methanocaldococcus jannaschii} SCOP: c.108.1.4 PDB: 1f5s_A 1l7n_A 1l7p_A* 1l7o_A* 1j97_A* | Back alignment and structure |
|---|
Probab=99.08 E-value=2e-10 Score=115.76 Aligned_cols=65 Identities=25% Similarity=0.350 Sum_probs=54.0
Q ss_pred CCCCHHHHHHHHHHHhhhcCCCcceEEEEeCCchhHHHHHHccccccCCCCCCCccEEEEEeCCC---ccccceEcCC--
Q 003025 754 QGVSKGVVAEKIFTTMAESGRHADFVLCIGDDRSDEDMFEIIGNATSSGVLSSNASVFACTVGQK---PSKAKYYLDD-- 828 (856)
Q Consensus 754 ~gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~---~s~A~y~l~~-- 828 (856)
.+.+|+.++..+++++ |++++++++|||+.||++|++.+|. +|.++.. +..|+|++++
T Consensus 140 ~~~~K~~~l~~~~~~l---gi~~~~~~~iGD~~~Di~~~~~ag~--------------~~~~~~~~~~~~~a~~v~~~~~ 202 (211)
T 1l7m_A 140 KENAKGEILEKIAKIE---GINLEDTVAVGDGANDISMFKKAGL--------------KIAFCAKPILKEKADICIEKRD 202 (211)
T ss_dssp STTHHHHHHHHHHHHH---TCCGGGEEEEECSGGGHHHHHHCSE--------------EEEESCCHHHHTTCSEEECSSC
T ss_pred CCccHHHHHHHHHHHc---CCCHHHEEEEecChhHHHHHHHCCC--------------EEEECCCHHHHhhcceeecchh
Confidence 4788999999999999 9999999999999999999999995 3556532 3568898876
Q ss_pred hhHHHHH
Q 003025 829 AAEVVTM 835 (856)
Q Consensus 829 ~~eV~~~ 835 (856)
..++..+
T Consensus 203 ~~~l~~~ 209 (211)
T 1l7m_A 203 LREILKY 209 (211)
T ss_dssp GGGGGGG
T ss_pred HHHHHHh
Confidence 7776543
|
| >3mc1_A Predicted phosphatase, HAD family; PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.93A {Clostridium acetobutylicum} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.05 E-value=1.7e-10 Score=117.87 Aligned_cols=76 Identities=18% Similarity=0.125 Sum_probs=64.3
Q ss_pred EeCCCCHHHHHHHHHHHhhhcCCCcceEEEEeCCchhHHHHHHccccccCCCCCCCccEEEEEeCCC------ccccceE
Q 003025 752 KPQGVSKGVVAEKIFTTMAESGRHADFVLCIGDDRSDEDMFEIIGNATSSGVLSSNASVFACTVGQK------PSKAKYY 825 (856)
Q Consensus 752 ~p~gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~------~s~A~y~ 825 (856)
.+.+..|+.+++.+++++ |++++++++|||+.||++|++.+|.. ++.|++|+. +..|+|+
T Consensus 138 ~~~~kp~~~~~~~~~~~l---gi~~~~~i~iGD~~~Di~~a~~aG~~-----------~i~v~~g~~~~~~~~~~~ad~v 203 (226)
T 3mc1_A 138 DGKLSTKEDVIRYAMESL---NIKSDDAIMIGDREYDVIGALKNNLP-----------SIGVTYGFGSYEELKNAGANYI 203 (226)
T ss_dssp TSSSCSHHHHHHHHHHHH---TCCGGGEEEEESSHHHHHHHHTTTCC-----------EEEESSSSSCHHHHHHHTCSEE
T ss_pred CCCCCCCHHHHHHHHHHh---CcCcccEEEECCCHHHHHHHHHCCCC-----------EEEEccCCCCHHHHHHcCCCEE
Confidence 466788999999999999 99999999999999999999999973 366777764 3678999
Q ss_pred cCChhHHHHHHHHHHH
Q 003025 826 LDDAAEVVTMLEALAE 841 (856)
Q Consensus 826 l~~~~eV~~~L~~L~~ 841 (856)
+++.+++.++|.....
T Consensus 204 ~~s~~el~~~~~~~~~ 219 (226)
T 3mc1_A 204 VNSVDELHKKILELRE 219 (226)
T ss_dssp ESSHHHHHHHHHTC--
T ss_pred ECCHHHHHHHHHHHhc
Confidence 9999999988876553
|
| >4ex6_A ALNB; modified rossman fold, phosphatase, magnesium binding, hydro; 1.25A {Streptomyces SP} PDB: 4ex7_A | Back alignment and structure |
|---|
Probab=99.04 E-value=2.4e-10 Score=117.79 Aligned_cols=73 Identities=21% Similarity=0.240 Sum_probs=62.6
Q ss_pred EeCCCCHHHHHHHHHHHhhhcCCCcceEEEEeCCchhHHHHHHccccccCCCCCCCccEEEEEeCCC------ccccceE
Q 003025 752 KPQGVSKGVVAEKIFTTMAESGRHADFVLCIGDDRSDEDMFEIIGNATSSGVLSSNASVFACTVGQK------PSKAKYY 825 (856)
Q Consensus 752 ~p~gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~------~s~A~y~ 825 (856)
.+.+..|+.+++.+++++ |++++++++|||+.||++|++.+|.. ++.|++|+. ...|+|+
T Consensus 156 ~~~~kp~~~~~~~~~~~l---g~~~~~~i~vGD~~~Di~~a~~aG~~-----------~i~v~~g~~~~~~~~~~~ad~v 221 (237)
T 4ex6_A 156 VERGKPHPDMALHVARGL---GIPPERCVVIGDGVPDAEMGRAAGMT-----------VIGVSYGVSGPDELMRAGADTV 221 (237)
T ss_dssp SSSCTTSSHHHHHHHHHH---TCCGGGEEEEESSHHHHHHHHHTTCE-----------EEEESSSSSCHHHHHHTTCSEE
T ss_pred CCCCCCCHHHHHHHHHHc---CCCHHHeEEEcCCHHHHHHHHHCCCe-----------EEEEecCCCCHHHHHhcCCCEE
Confidence 456778999999999999 99999999999999999999999973 456777753 2479999
Q ss_pred cCChhHHHHHHHH
Q 003025 826 LDDAAEVVTMLEA 838 (856)
Q Consensus 826 l~~~~eV~~~L~~ 838 (856)
+++..++.++|+.
T Consensus 222 ~~~~~el~~~l~~ 234 (237)
T 4ex6_A 222 VDSFPAAVTAVLD 234 (237)
T ss_dssp ESSHHHHHHHHHH
T ss_pred ECCHHHHHHHHHc
Confidence 9999999988864
|
| >3ij5_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; IDP022 hydrolase, lipopolysaccharide biosynthesis, magnesium, STRU genomics; 1.95A {Yersinia pestis} | Back alignment and structure |
|---|
Probab=99.04 E-value=1.4e-09 Score=111.59 Aligned_cols=72 Identities=22% Similarity=0.235 Sum_probs=57.7
Q ss_pred CCHHHHHHHHHHHhhhcCCCcceEEEEeCCchhHHHHHHccccccCCCCCCCccEEEEEeCCC----ccccceEcCCh--
Q 003025 756 VSKGVVAEKIFTTMAESGRHADFVLCIGDDRSDEDMFEIIGNATSSGVLSSNASVFACTVGQK----PSKAKYYLDDA-- 829 (856)
Q Consensus 756 vsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~----~s~A~y~l~~~-- 829 (856)
.+|+.+++.+++++ |++++++++|||+.||++|++.+|. ++++++. +..|+|++.+.
T Consensus 123 k~K~~~l~~~~~~l---g~~~~~~~~vGDs~nDi~~~~~ag~--------------~~a~~~~~~~~~~~Ad~v~~~~~~ 185 (211)
T 3ij5_A 123 SDKLVAYHELLATL---QCQPEQVAYIGDDLIDWPVMAQVGL--------------SVAVADAHPLLLPKAHYVTRIKGG 185 (211)
T ss_dssp SSHHHHHHHHHHHH---TCCGGGEEEEECSGGGHHHHTTSSE--------------EEECTTSCTTTGGGSSEECSSCTT
T ss_pred CChHHHHHHHHHHc---CcCcceEEEEcCCHHHHHHHHHCCC--------------EEEeCCccHHHHhhCCEEEeCCCC
Confidence 45999999999999 9999999999999999999999985 5677654 46788998654
Q ss_pred h-HHHHHHHHHHHhcC
Q 003025 830 A-EVVTMLEALAEASA 844 (856)
Q Consensus 830 ~-eV~~~L~~L~~~~~ 844 (856)
+ .|.++++.+.....
T Consensus 186 ~G~v~e~~~~ll~~~~ 201 (211)
T 3ij5_A 186 RGAVREVCDLILLAQD 201 (211)
T ss_dssp TTHHHHHHHHHHHHTT
T ss_pred CcHHHHHHHHHHHHcC
Confidence 2 36677777766544
|
| >3l8h_A Putative haloacid dehalogenase-like hydrolase; HAD superfamily, GMHB, D-glycero-D-manno-heptose-1, 7-bispho phosphatase; HET: FX1; 1.68A {Bordetella bronchiseptica} | Back alignment and structure |
|---|
Probab=99.03 E-value=1.3e-09 Score=107.96 Aligned_cols=67 Identities=18% Similarity=0.096 Sum_probs=55.0
Q ss_pred HHHHHHHHHHHhhhcCCCcceEEEEeCCchhHHHHHHccccccCCCCCCCccEEEEEeCCC--------ccccceEcCCh
Q 003025 758 KGVVAEKIFTTMAESGRHADFVLCIGDDRSDEDMFEIIGNATSSGVLSSNASVFACTVGQK--------PSKAKYYLDDA 829 (856)
Q Consensus 758 KG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~--------~s~A~y~l~~~ 829 (856)
+...++.+++++ |++++++++|||+.||+.|.+.+|.. ++.|..|.. ...|+|++++.
T Consensus 103 ~~~~~~~~~~~~---~~~~~~~~~vGD~~~Di~~a~~aG~~-----------~i~v~~g~~~~~~~~~~~~~~d~v~~~l 168 (179)
T 3l8h_A 103 LPGMYRDIARRY---DVDLAGVPAVGDSLRDLQAAAQAGCA-----------PWLVQTGNGRKTLAQGGLPEGTRVCEDL 168 (179)
T ss_dssp SSHHHHHHHHHH---TCCCTTCEEEESSHHHHHHHHHHTCE-----------EEEESTTTHHHHHHHCCCCTTEEEESSH
T ss_pred CHHHHHHHHHHc---CCCHHHEEEECCCHHHHHHHHHCCCc-----------EEEECCCCcchhhhhcccCCCcEEecCH
Confidence 445678899999 99999999999999999999999973 356666753 15679999999
Q ss_pred hHHHHHHHH
Q 003025 830 AEVVTMLEA 838 (856)
Q Consensus 830 ~eV~~~L~~ 838 (856)
.++.++|..
T Consensus 169 ~el~~~l~~ 177 (179)
T 3l8h_A 169 AAVAEQLLQ 177 (179)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHh
Confidence 999888753
|
| >3u26_A PF00702 domain protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, unknown function; 1.59A {Pyrococcus horikoshii} SCOP: c.108.1.1 PDB: 1x42_A | Back alignment and structure |
|---|
Probab=99.02 E-value=9.4e-11 Score=120.34 Aligned_cols=73 Identities=15% Similarity=0.208 Sum_probs=61.4
Q ss_pred CCCHHHHHHHHHHHhhhcCCCcceEEEEeCCc-hhHHHHHHccccccCCCCCCCccEEEEEeCCCc----cccceEcCCh
Q 003025 755 GVSKGVVAEKIFTTMAESGRHADFVLCIGDDR-SDEDMFEIIGNATSSGVLSSNASVFACTVGQKP----SKAKYYLDDA 829 (856)
Q Consensus 755 gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~-ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~~----s~A~y~l~~~ 829 (856)
+-.|+.+++.+++++ |++++++++|||+. ||+.|++.+|.. ++.|+.|+.. ..|+|++++.
T Consensus 154 ~kp~~~~~~~~~~~~---~~~~~~~~~vGD~~~~Di~~a~~aG~~-----------~~~v~~~~~~~~~~~~a~~~~~~~ 219 (234)
T 3u26_A 154 FKPHPRIFELALKKA---GVKGEEAVYVGDNPVKDCGGSKNLGMT-----------SILLDRKGEKREFWDKCDFIVSDL 219 (234)
T ss_dssp CTTSHHHHHHHHHHH---TCCGGGEEEEESCTTTTHHHHHTTTCE-----------EEEECSSSTTGGGGGGCSEEESST
T ss_pred CCcCHHHHHHHHHHc---CCCchhEEEEcCCcHHHHHHHHHcCCE-----------EEEECCCCCccccccCCCEeeCCH
Confidence 445788899999999 99999999999997 999999999973 3566777642 4799999999
Q ss_pred hHHHHHHHHHHH
Q 003025 830 AEVVTMLEALAE 841 (856)
Q Consensus 830 ~eV~~~L~~L~~ 841 (856)
.++.++|+.+..
T Consensus 220 ~el~~~l~~~~~ 231 (234)
T 3u26_A 220 REVIKIVDELNG 231 (234)
T ss_dssp HHHHHHHHHHC-
T ss_pred HHHHHHHHHHhh
Confidence 999999988753
|
| >3kd3_A Phosphoserine phosphohydrolase-like protein; csgid, niaid, S genomics, national institute of allergy and infectious DISE (niaid); 1.70A {Francisella tularensis subsp} | Back alignment and structure |
|---|
Probab=98.98 E-value=1.1e-09 Score=110.53 Aligned_cols=77 Identities=18% Similarity=0.173 Sum_probs=61.1
Q ss_pred cCeEEEEEeCCCCHHHHHHHHHHHhhhcCCCcceEEEEeCCchhHHHHHHccccccCCCCCCCccEEEEEeC--CC----
Q 003025 745 GQFIVEVKPQGVSKGVVAEKIFTTMAESGRHADFVLCIGDDRSDEDMFEIIGNATSSGVLSSNASVFACTVG--QK---- 818 (856)
Q Consensus 745 g~~~vEI~p~gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG--~~---- 818 (856)
...+.++.+.+.+|+..++.+.+.+ |++++++++|||+.||++|++ +|.. .+.|.+| +.
T Consensus 136 ~~~~~~~~~~~~~~~~~~~~l~~~~---~~~~~~~~~vGD~~~Di~~~~-~G~~-----------~~~v~~~~~~~~~~~ 200 (219)
T 3kd3_A 136 DGSFKELDNSNGACDSKLSAFDKAK---GLIDGEVIAIGDGYTDYQLYE-KGYA-----------TKFIAYMEHIEREKV 200 (219)
T ss_dssp TSBEEEEECTTSTTTCHHHHHHHHG---GGCCSEEEEEESSHHHHHHHH-HTSC-----------SEEEEECSSCCCHHH
T ss_pred CCceeccCCCCCCcccHHHHHHHHh---CCCCCCEEEEECCHhHHHHHh-CCCC-----------cEEEeccCccccHHH
Confidence 3456678888999999999999998 999999999999999999995 5642 1344444 32
Q ss_pred ccccceEcCChhHHHHHH
Q 003025 819 PSKAKYYLDDAAEVVTML 836 (856)
Q Consensus 819 ~s~A~y~l~~~~eV~~~L 836 (856)
+..|+|++++.+++.++|
T Consensus 201 ~~~ad~v~~~~~el~~~l 218 (219)
T 3kd3_A 201 INLSKYVARNVAELASLI 218 (219)
T ss_dssp HHHCSEEESSHHHHHHHH
T ss_pred HhhcceeeCCHHHHHHhh
Confidence 356999999999988765
|
| >1swv_A Phosphonoacetaldehyde hydrolase; HAD enzyme superfamily, phosphonotase, metal binding; 2.30A {Bacillus cereus} SCOP: c.108.1.3 PDB: 1sww_A 2iof_A* 2ioh_A 1rql_A 1rqn_A 2iof_K* 1rdf_A 1fez_A | Back alignment and structure |
|---|
Probab=98.96 E-value=1.6e-10 Score=121.69 Aligned_cols=75 Identities=17% Similarity=0.235 Sum_probs=63.8
Q ss_pred EeCCCCHHHHHHHHHHHhhhcCCCc-ceEEEEeCCchhHHHHHHccccccCCCCCCCccEEEEEeCCC------------
Q 003025 752 KPQGVSKGVVAEKIFTTMAESGRHA-DFVLCIGDDRSDEDMFEIIGNATSSGVLSSNASVFACTVGQK------------ 818 (856)
Q Consensus 752 ~p~gvsKG~al~~Ll~~l~~~gi~~-d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~------------ 818 (856)
.+.+.+|+.+++.+++++ |+++ +++++|||+.||++|++.+|.. ++.|++|+.
T Consensus 156 ~~~~kp~~~~~~~~~~~l---gi~~~~~~i~iGD~~nDi~~a~~aG~~-----------~i~v~~~~~~~~~~~~~~~~~ 221 (267)
T 1swv_A 156 VPAGRPYPWMCYKNAMEL---GVYPMNHMIKVGDTVSDMKEGRNAGMW-----------TVGVILGSSELGLTEEEVENM 221 (267)
T ss_dssp SSCCTTSSHHHHHHHHHH---TCCSGGGEEEEESSHHHHHHHHHTTSE-----------EEEECTTCTTTCCCHHHHHHS
T ss_pred cCCCCCCHHHHHHHHHHh---CCCCCcCEEEEeCCHHHHHHHHHCCCE-----------EEEEcCCCCccCccHHHHhhc
Confidence 466788999999999999 9999 9999999999999999999963 356777754
Q ss_pred -----------------ccccceEcCChhHHHHHHHHHH
Q 003025 819 -----------------PSKAKYYLDDAAEVVTMLEALA 840 (856)
Q Consensus 819 -----------------~s~A~y~l~~~~eV~~~L~~L~ 840 (856)
...|+|++++..++.++|..+.
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~ad~v~~~~~el~~~l~~~~ 260 (267)
T 1swv_A 222 DSVELREKIEVVRNRFVENGAHFTIETMQELESVMEHIE 260 (267)
T ss_dssp CHHHHHHHHHHHHHHHHHTTCSEEESSGGGHHHHHHHHT
T ss_pred hhhhhhhhhhhHHHHHHhcCCceeccCHHHHHHHHHHHh
Confidence 1358999999999999987764
|
| >3dv9_A Beta-phosphoglucomutase; structural genomics, APC60149, PSI- protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.72A {Bacteroides vulgatus} | Back alignment and structure |
|---|
Probab=98.94 E-value=1.5e-09 Score=112.34 Aligned_cols=78 Identities=14% Similarity=0.037 Sum_probs=65.9
Q ss_pred eCCCCHHHHHHHHHHHhhhcCCCcceEEEEeCCchhHHHHHHccccccCCCCCCCccEEEEEeCCC------ccccceEc
Q 003025 753 PQGVSKGVVAEKIFTTMAESGRHADFVLCIGDDRSDEDMFEIIGNATSSGVLSSNASVFACTVGQK------PSKAKYYL 826 (856)
Q Consensus 753 p~gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~------~s~A~y~l 826 (856)
+.+..|+.+++.+++++ |++++++++|||+.||++|++.+|.. ++.|..|.. +..|+|++
T Consensus 162 ~~~kp~~~~~~~~~~~l---g~~~~~~i~vGD~~~Di~~a~~aG~~-----------~i~v~~~~~~~~~l~~~~ad~v~ 227 (247)
T 3dv9_A 162 KYGKPNPEPYLMALKKG---GFKPNEALVIENAPLGVQAGVAAGIF-----------TIAVNTGPLHDNVLLNEGANLLF 227 (247)
T ss_dssp SSCTTSSHHHHHHHHHH---TCCGGGEEEEECSHHHHHHHHHTTSE-----------EEEECCSSSCHHHHHTTTCSEEE
T ss_pred CCCCCCCHHHHHHHHHc---CCChhheEEEeCCHHHHHHHHHCCCe-----------EEEEcCCCCCHHHHHhcCCCEEE
Confidence 56777899999999999 99999999999999999999999973 345555543 24799999
Q ss_pred CChhHHHHHHHHHHHhcC
Q 003025 827 DDAAEVVTMLEALAEASA 844 (856)
Q Consensus 827 ~~~~eV~~~L~~L~~~~~ 844 (856)
++..++.++|+.+.....
T Consensus 228 ~~~~el~~~l~~~~~~~~ 245 (247)
T 3dv9_A 228 HSMPDFNKNWETLQSALK 245 (247)
T ss_dssp SSHHHHHHHHHHHHHHHC
T ss_pred CCHHHHHHHHHHHHHHhc
Confidence 999999999999987544
|
| >3m9l_A Hydrolase, haloacid dehalogenase-like family; HAD family hydrolase, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Pseudomonas fluorescens} PDB: 2ybd_A* 3r09_A* | Back alignment and structure |
|---|
Probab=98.94 E-value=1.4e-09 Score=109.87 Aligned_cols=69 Identities=19% Similarity=0.159 Sum_probs=58.5
Q ss_pred CCCCHHHHHHHHHHHhhhcCCCcceEEEEeCCchhHHHHHHccccccCCCCCCCccEEEEEeCCC----ccccceEcCCh
Q 003025 754 QGVSKGVVAEKIFTTMAESGRHADFVLCIGDDRSDEDMFEIIGNATSSGVLSSNASVFACTVGQK----PSKAKYYLDDA 829 (856)
Q Consensus 754 ~gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~----~s~A~y~l~~~ 829 (856)
.+-.|+.+++.+++++ |++++++++|||+.||++|++.+|.. +|.+++. +..|+|++++.
T Consensus 125 ~~kp~~~~~~~~~~~~---g~~~~~~i~iGD~~~Di~~a~~aG~~-------------~i~v~~~~~~~~~~ad~v~~~~ 188 (205)
T 3m9l_A 125 PPKPHPGGLLKLAEAW---DVSPSRMVMVGDYRFDLDCGRAAGTR-------------TVLVNLPDNPWPELTDWHARDC 188 (205)
T ss_dssp CCTTSSHHHHHHHHHT---TCCGGGEEEEESSHHHHHHHHHHTCE-------------EEECSSSSCSCGGGCSEECSSH
T ss_pred CCCCCHHHHHHHHHHc---CCCHHHEEEECCCHHHHHHHHHcCCE-------------EEEEeCCCCcccccCCEEeCCH
Confidence 3445788999999999 99999999999999999999999962 5666653 46699999999
Q ss_pred hHHHHHHHH
Q 003025 830 AEVVTMLEA 838 (856)
Q Consensus 830 ~eV~~~L~~ 838 (856)
+++.+.|+.
T Consensus 189 ~el~~~~~~ 197 (205)
T 3m9l_A 189 AQLRDLLSA 197 (205)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHh
Confidence 998888775
|
| >2hcf_A Hydrolase, haloacid dehalogenase-like family; NP_662590.1, ST genomics, PSI-2, protein structure initiative; 1.80A {Chlorobaculum tepidum} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=98.93 E-value=2.2e-09 Score=110.02 Aligned_cols=70 Identities=17% Similarity=0.203 Sum_probs=58.2
Q ss_pred HHHHHHHHHHHhhhcC--CCcceEEEEeCCchhHHHHHHccccccCCCCCCCccEEEEEeCCCc------cccceEcCCh
Q 003025 758 KGVVAEKIFTTMAESG--RHADFVLCIGDDRSDEDMFEIIGNATSSGVLSSNASVFACTVGQKP------SKAKYYLDDA 829 (856)
Q Consensus 758 KG~al~~Ll~~l~~~g--i~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~~------s~A~y~l~~~ 829 (856)
+..+++.+++++ | ++++++++|||+.||++|++.+|.. ++.|+.|... ..|+|++++.
T Consensus 153 ~~~~~~~~~~~l---g~~~~~~~~i~iGD~~~Di~~a~~aG~~-----------~i~v~~~~~~~~~~~~~~a~~v~~~~ 218 (234)
T 2hcf_A 153 PHIALERARRMT---GANYSPSQIVIIGDTEHDIRCARELDAR-----------SIAVATGNFTMEELARHKPGTLFKNF 218 (234)
T ss_dssp HHHHHHHHHHHH---CCCCCGGGEEEEESSHHHHHHHHTTTCE-----------EEEECCSSSCHHHHHTTCCSEEESCS
T ss_pred HHHHHHHHHHHh---CCCCCcccEEEECCCHHHHHHHHHCCCc-----------EEEEcCCCCCHHHHHhCCCCEEeCCH
Confidence 567788999999 9 8999999999999999999999973 3566666532 2388999999
Q ss_pred hHHHHHHHHHHH
Q 003025 830 AEVVTMLEALAE 841 (856)
Q Consensus 830 ~eV~~~L~~L~~ 841 (856)
.++.++|+.+..
T Consensus 219 ~el~~~l~~~~~ 230 (234)
T 2hcf_A 219 AETDEVLASILT 230 (234)
T ss_dssp CCHHHHHHHHHC
T ss_pred HhHHHHHHHHhc
Confidence 999999988863
|
| >3iru_A Phoshonoacetaldehyde hydrolase like protein; phosphonoacetaldehyde hydrolase like P structural genomics, PSI-2, protein structure initiative; 2.30A {Oleispira antarctica} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.92 E-value=7.3e-10 Score=116.71 Aligned_cols=76 Identities=13% Similarity=0.091 Sum_probs=65.2
Q ss_pred EeCCCCHHHHHHHHHHHhhhcCCCc-ceEEEEeCCchhHHHHHHccccccCCCCCCCccEEEEEeCCC------------
Q 003025 752 KPQGVSKGVVAEKIFTTMAESGRHA-DFVLCIGDDRSDEDMFEIIGNATSSGVLSSNASVFACTVGQK------------ 818 (856)
Q Consensus 752 ~p~gvsKG~al~~Ll~~l~~~gi~~-d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~------------ 818 (856)
.+.+..|+.+++.+++++ |+++ +++++|||+.||+.|++.+|.. ++.|+.|..
T Consensus 164 ~~~~kp~~~~~~~~~~~l---gi~~~~~~i~vGD~~~Di~~a~~aG~~-----------~v~v~~g~~~~~~~~~~~~~~ 229 (277)
T 3iru_A 164 VVRGRPFPDMALKVALEL---EVGHVNGCIKVDDTLPGIEEGLRAGMW-----------TVGVSCSGNEVGLDREDWQAL 229 (277)
T ss_dssp SSSCTTSSHHHHHHHHHH---TCSCGGGEEEEESSHHHHHHHHHTTCE-----------EEEECSSSTTTCCCHHHHHHS
T ss_pred cCCCCCCHHHHHHHHHHc---CCCCCccEEEEcCCHHHHHHHHHCCCe-----------EEEEecCCcccccchhhhhhc
Confidence 466788999999999999 9999 9999999999999999999973 467777731
Q ss_pred -----------------ccccceEcCChhHHHHHHHHHHH
Q 003025 819 -----------------PSKAKYYLDDAAEVVTMLEALAE 841 (856)
Q Consensus 819 -----------------~s~A~y~l~~~~eV~~~L~~L~~ 841 (856)
...|+|++++..++.++|+.+..
T Consensus 230 ~~~~~~~~~~~~~~~l~~~~ad~v~~~~~el~~~l~~~~~ 269 (277)
T 3iru_A 230 SSDEQQSYRQHAEQRLFNAGAHYVIDSVADLETVITDVNR 269 (277)
T ss_dssp CHHHHHHHHHHHHHHHHHHTCSEEESSGGGTHHHHHHHHH
T ss_pred chhhhhhhhhhhHHHHhhCCCCEEecCHHHHHHHHHHHHH
Confidence 24589999999999999988765
|
| >3qxg_A Inorganic pyrophosphatase; hydrolase, magnesium binding site, NEW YORK research center for structural genomics; HET: TLA; 1.24A {Bacteroides thetaiotaomicron} PDB: 3qu2_A* 3qx7_A 3quq_A* 3r9k_A 3qut_A 3qu9_A* 3qu7_A 3qu5_A 3qyp_A 3quc_A 3qub_A 3qu4_A | Back alignment and structure |
|---|
Probab=98.91 E-value=7.3e-10 Score=114.95 Aligned_cols=73 Identities=12% Similarity=0.063 Sum_probs=61.6
Q ss_pred eCCCCHHHHHHHHHHHhhhcCCCcceEEEEeCCchhHHHHHHccccccCCCCCCCccEEEEEeCCCc------cccceEc
Q 003025 753 PQGVSKGVVAEKIFTTMAESGRHADFVLCIGDDRSDEDMFEIIGNATSSGVLSSNASVFACTVGQKP------SKAKYYL 826 (856)
Q Consensus 753 p~gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~~------s~A~y~l 826 (856)
+.+..|+.+++.+++++ |++++++++|||+.||+.|++.+|.. ++.|..|... ..|+|++
T Consensus 163 ~~~kp~~~~~~~~~~~l---g~~~~~~i~vGD~~~Di~~a~~aG~~-----------~i~v~~~~~~~~~l~~~~ad~v~ 228 (243)
T 3qxg_A 163 KYGKPNPEPYLMALKKG---GLKADEAVVIENAPLGVEAGHKAGIF-----------TIAVNTGPLDGQVLLDAGADLLF 228 (243)
T ss_dssp SSCTTSSHHHHHHHHHT---TCCGGGEEEEECSHHHHHHHHHTTCE-----------EEEECCSSSCHHHHHHTTCSEEE
T ss_pred CCCCCChHHHHHHHHHc---CCCHHHeEEEeCCHHHHHHHHHCCCE-----------EEEEeCCCCCHHHHHhcCCCEEE
Confidence 45667899999999999 99999999999999999999999973 2445555431 3699999
Q ss_pred CChhHHHHHHHHH
Q 003025 827 DDAAEVVTMLEAL 839 (856)
Q Consensus 827 ~~~~eV~~~L~~L 839 (856)
++..++.++|+.|
T Consensus 229 ~s~~el~~~l~~l 241 (243)
T 3qxg_A 229 PSMQTLCDSWDTI 241 (243)
T ss_dssp SCHHHHHHHHHHH
T ss_pred CCHHHHHHHHHhh
Confidence 9999999999887
|
| >3d6j_A Putative haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides fragilis nctc 9343} | Back alignment and structure |
|---|
Probab=98.90 E-value=8.6e-10 Score=111.91 Aligned_cols=76 Identities=13% Similarity=0.104 Sum_probs=53.3
Q ss_pred eCCCCHHHHHHHHHHHhhhcCCCcceEEEEeCCchhHHHHHHccccccCCCCCCCccEEEEEeCC-C----c-cccceEc
Q 003025 753 PQGVSKGVVAEKIFTTMAESGRHADFVLCIGDDRSDEDMFEIIGNATSSGVLSSNASVFACTVGQ-K----P-SKAKYYL 826 (856)
Q Consensus 753 p~gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~-~----~-s~A~y~l 826 (856)
+.+..|+.+++.+++++ |++++++++|||+.||++|++.+|.. ++.|..|. . + ..|+|++
T Consensus 142 ~~~k~~~~~~~~~~~~~---~~~~~~~i~iGD~~nDi~~~~~aG~~-----------~~~~~~~~~~~~~l~~~~ad~v~ 207 (225)
T 3d6j_A 142 THHKPDPEGLLLAIDRL---KACPEEVLYIGDSTVDAGTAAAAGVS-----------FTGVTSGMTTAQEFQAYPYDRII 207 (225)
T ss_dssp SSCTTSTHHHHHHHHHT---TCCGGGEEEEESSHHHHHHHHHHTCE-----------EEEETTSSCCTTGGGGSCCSEEE
T ss_pred CCCCCChHHHHHHHHHh---CCChHHeEEEcCCHHHHHHHHHCCCe-----------EEEECCCCCChHHHhhcCCCEEE
Confidence 44566789999999999 99999999999999999999999973 22333332 1 1 2389999
Q ss_pred CChhHHHHHHHHHHHh
Q 003025 827 DDAAEVVTMLEALAEA 842 (856)
Q Consensus 827 ~~~~eV~~~L~~L~~~ 842 (856)
++.+++.++|+.+...
T Consensus 208 ~~~~el~~~l~~~~~~ 223 (225)
T 3d6j_A 208 STLGQLISVPEDKSGC 223 (225)
T ss_dssp SSGGGGC---------
T ss_pred CCHHHHHHhhhhhcCC
Confidence 9999999999877653
|
| >2wf7_A Beta-PGM, beta-phosphoglucomutase; transition state analogue, haloacid dehalogenase superfamily, isomerase, phosphotransferase; HET: G7P; 1.05A {Lactococcus lactis} PDB: 1o03_A* 1z4n_A* 1z4o_A* 1zol_A 2wf5_A* 2wf6_A* 1o08_A* 2wf8_A* 2wf9_A* 2wfa_A 2whe_A 1lvh_A* 3fm9_A | Back alignment and structure |
|---|
Probab=98.89 E-value=4.8e-10 Score=113.79 Aligned_cols=66 Identities=8% Similarity=-0.019 Sum_probs=52.4
Q ss_pred CHHHHHHHHHHHhhhcCCCcceEEEEeCCchhHHHHHHccccccCCCCCCCccEEEEEeCCC----ccccceEcCChhH-
Q 003025 757 SKGVVAEKIFTTMAESGRHADFVLCIGDDRSDEDMFEIIGNATSSGVLSSNASVFACTVGQK----PSKAKYYLDDAAE- 831 (856)
Q Consensus 757 sKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~----~s~A~y~l~~~~e- 831 (856)
.|+.+++.+++++ |++++++++|||+.||++|++.+|.. +.+++. + .|+|++++.++
T Consensus 146 p~~~~~~~~~~~l---gi~~~~~i~iGD~~nDi~~a~~aG~~--------------~~~~~~~~~~~-~a~~v~~~~~el 207 (221)
T 2wf7_A 146 PAPDIFIAAAHAV---GVAPSESIGLEDSQAGIQAIKDSGAL--------------PIGVGRPEDLG-DDIVIVPDTSHY 207 (221)
T ss_dssp TSSHHHHHHHHHT---TCCGGGEEEEESSHHHHHHHHHHTCE--------------EEEESCHHHHC-SSSEEESSGGGC
T ss_pred CChHHHHHHHHHc---CCChhHeEEEeCCHHHHHHHHHCCCE--------------EEEECCHHHhc-cccchhcCHHhC
Confidence 3556999999999 99999999999999999999999963 333332 3 78999987655
Q ss_pred -HHHHHHHHH
Q 003025 832 -VVTMLEALA 840 (856)
Q Consensus 832 -V~~~L~~L~ 840 (856)
|..+++.+.
T Consensus 208 ~~~~~~~~~~ 217 (221)
T 2wf7_A 208 TLEFLKEVWL 217 (221)
T ss_dssp CHHHHHHHHH
T ss_pred CHHHHHHHHh
Confidence 566666665
|
| >2gmw_A D,D-heptose 1,7-bisphosphate phosphatase; Zn-binding protein, hydrolase; 1.50A {Escherichia coli} SCOP: c.108.1.19 PDB: 3esq_A 3esr_A 3l1u_A 3l1v_A 3l8e_A 3l8f_A 3l8g_A* | Back alignment and structure |
|---|
Probab=98.88 E-value=3.4e-09 Score=108.38 Aligned_cols=67 Identities=10% Similarity=0.071 Sum_probs=54.5
Q ss_pred HHHHHHHHHHHhhhcCCCcceEEEEeCCchhHHHHHHccccccCCCCCCCccE-EEEEeCCCc-----cccceEcCChhH
Q 003025 758 KGVVAEKIFTTMAESGRHADFVLCIGDDRSDEDMFEIIGNATSSGVLSSNASV-FACTVGQKP-----SKAKYYLDDAAE 831 (856)
Q Consensus 758 KG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~-~av~vG~~~-----s~A~y~l~~~~e 831 (856)
|...++.+++++ |++++++++|||+.||+.|.+.+|.. . +.|..|... ..|+|++++..+
T Consensus 133 ~p~~~~~~~~~l---gi~~~~~~~VGD~~~Di~~a~~aG~~-----------~~i~v~~g~~~~~~~~~~~d~vi~~l~e 198 (211)
T 2gmw_A 133 HPGMLLSARDYL---HIDMAASYMVGDKLEDMQAAVAANVG-----------TKVLVRTGKPITPEAENAADWVLNSLAD 198 (211)
T ss_dssp SCHHHHHHHHHH---TBCGGGCEEEESSHHHHHHHHHTTCS-----------EEEEESSSSCCCHHHHHHCSEEESCGGG
T ss_pred CHHHHHHHHHHc---CCCHHHEEEEcCCHHHHHHHHHCCCc-----------eEEEEecCCCccccccCCCCEEeCCHHH
Confidence 567889999999 99999999999999999999999973 3 455556432 358899999999
Q ss_pred HHHHHHH
Q 003025 832 VVTMLEA 838 (856)
Q Consensus 832 V~~~L~~ 838 (856)
+.++|..
T Consensus 199 l~~~l~~ 205 (211)
T 2gmw_A 199 LPQAIKK 205 (211)
T ss_dssp HHHHHHC
T ss_pred HHHHHHh
Confidence 8887754
|
| >3vay_A HAD-superfamily hydrolase; rossmann fold, haloacid dehalogenase; 1.98A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=98.88 E-value=1e-10 Score=119.88 Aligned_cols=72 Identities=11% Similarity=0.046 Sum_probs=59.0
Q ss_pred CCCCHHHHHHHHHHHhhhcCCCcceEEEEeCCc-hhHHHHHHccccccCCCCCCCccEEEEEeCCC----ccccceEcCC
Q 003025 754 QGVSKGVVAEKIFTTMAESGRHADFVLCIGDDR-SDEDMFEIIGNATSSGVLSSNASVFACTVGQK----PSKAKYYLDD 828 (856)
Q Consensus 754 ~gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~-ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~----~s~A~y~l~~ 828 (856)
.+-.|+.+++.+++++ |++++++++|||+. ||+.|.+.+|.. ++.|..|.. ...|.|++++
T Consensus 153 ~~kp~~~~~~~~~~~~---~~~~~~~~~vGD~~~~Di~~a~~aG~~-----------~~~v~~~~~~~~~~~~~~~~~~~ 218 (230)
T 3vay_A 153 IGKPDPAPFLEALRRA---KVDASAAVHVGDHPSDDIAGAQQAGMR-----------AIWYNPQGKAWDADRLPDAEIHN 218 (230)
T ss_dssp CCTTSHHHHHHHHHHH---TCCGGGEEEEESCTTTTHHHHHHTTCE-----------EEEECTTCCCCCSSSCCSEEESS
T ss_pred CCCcCHHHHHHHHHHh---CCCchheEEEeCChHHHHHHHHHCCCE-----------EEEEcCCCCCCcccCCCCeeECC
Confidence 4456799999999999 99999999999997 999999999974 234444432 4578899999
Q ss_pred hhHHHHHHHHH
Q 003025 829 AAEVVTMLEAL 839 (856)
Q Consensus 829 ~~eV~~~L~~L 839 (856)
..++.++|++.
T Consensus 219 l~el~~~l~~~ 229 (230)
T 3vay_A 219 LSQLPEVLARW 229 (230)
T ss_dssp GGGHHHHHHTT
T ss_pred HHHHHHHHHhh
Confidence 99999988764
|
| >3m1y_A Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, phophoserine phosphatase, protein structure initiative, structural genomics; 2.40A {Helicobacter pylori} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.87 E-value=2e-09 Score=109.16 Aligned_cols=68 Identities=18% Similarity=0.179 Sum_probs=53.2
Q ss_pred EeCCCCHHHHHHHHHHHhhhcCCCcceEEEEeCCchhHHHHHHccccccCCCCCCCccEEEEEeCCC---ccccceEcCC
Q 003025 752 KPQGVSKGVVAEKIFTTMAESGRHADFVLCIGDDRSDEDMFEIIGNATSSGVLSSNASVFACTVGQK---PSKAKYYLDD 828 (856)
Q Consensus 752 ~p~gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~---~s~A~y~l~~ 828 (856)
.+.+..|+.+++.+++++ |++++++++|||+.||++|++.+|.. +.+... +..|+|++++
T Consensus 137 ~~~~k~k~~~~~~~~~~~---g~~~~~~i~vGDs~~Di~~a~~aG~~--------------~~~~~~~~l~~~ad~v~~~ 199 (217)
T 3m1y_A 137 MMFSHSKGEMLLVLQRLL---NISKTNTLVVGDGANDLSMFKHAHIK--------------IAFNAKEVLKQHATHCINE 199 (217)
T ss_dssp CCSTTHHHHHHHHHHHHH---TCCSTTEEEEECSGGGHHHHTTCSEE--------------EEESCCHHHHTTCSEEECS
T ss_pred CCCCCChHHHHHHHHHHc---CCCHhHEEEEeCCHHHHHHHHHCCCe--------------EEECccHHHHHhcceeecc
Confidence 446788999999999999 99999999999999999999999963 344322 4789998864
Q ss_pred --hhHHHHHH
Q 003025 829 --AAEVVTML 836 (856)
Q Consensus 829 --~~eV~~~L 836 (856)
..++..++
T Consensus 200 ~dl~~~~~~~ 209 (217)
T 3m1y_A 200 PDLALIKPLI 209 (217)
T ss_dssp SBGGGGTTC-
T ss_pred cCHHHHHHHh
Confidence 44444433
|
| >2fdr_A Conserved hypothetical protein; SAD, structural genomics, agrobacter tumefaciens, HAD-superfamily hydrolase; 2.00A {Agrobacterium tumefaciens str} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=98.87 E-value=1.8e-09 Score=110.37 Aligned_cols=73 Identities=12% Similarity=0.055 Sum_probs=61.4
Q ss_pred EeCC--CCHHHHHHHHHHHhhhcCCCcceEEEEeCCchhHHHHHHccccccCCCCCCCccEEEEEeCCCcc---------
Q 003025 752 KPQG--VSKGVVAEKIFTTMAESGRHADFVLCIGDDRSDEDMFEIIGNATSSGVLSSNASVFACTVGQKPS--------- 820 (856)
Q Consensus 752 ~p~g--vsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~~s--------- 820 (856)
.+.+ .+|+.+++.+++++ |++++++++|||+.||++|++.+|.. ++.+++...
T Consensus 137 ~~~~~~kpk~~~~~~~~~~l---~~~~~~~i~iGD~~~Di~~a~~aG~~-------------~i~~~~~~~~~~~~~~~l 200 (229)
T 2fdr_A 137 LGADRVKPKPDIFLHGAAQF---GVSPDRVVVVEDSVHGIHGARAAGMR-------------VIGFTGASHTYPSHADRL 200 (229)
T ss_dssp HCTTCCTTSSHHHHHHHHHH---TCCGGGEEEEESSHHHHHHHHHTTCE-------------EEEECCSTTCCTTHHHHH
T ss_pred cccCCCCcCHHHHHHHHHHc---CCChhHeEEEcCCHHHHHHHHHCCCE-------------EEEEecCCccchhhhHHH
Confidence 3667 88999999999999 99999999999999999999999973 344444322
Q ss_pred ---ccceEcCChhHHHHHHHHHH
Q 003025 821 ---KAKYYLDDAAEVVTMLEALA 840 (856)
Q Consensus 821 ---~A~y~l~~~~eV~~~L~~L~ 840 (856)
.|+|++++..++.++|+.+.
T Consensus 201 ~~~~ad~v~~~~~el~~~l~~~~ 223 (229)
T 2fdr_A 201 TDAGAETVISRMQDLPAVIAAMA 223 (229)
T ss_dssp HHHTCSEEESCGGGHHHHHHHHT
T ss_pred hhcCCceeecCHHHHHHHHHHhh
Confidence 28999999999999998874
|
| >2om6_A Probable phosphoserine phosphatase; rossmann fold, B-hairpin, four-helix bundle, structural GENO NPPSFA; 2.20A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=98.85 E-value=1.1e-10 Score=119.48 Aligned_cols=71 Identities=14% Similarity=0.160 Sum_probs=57.2
Q ss_pred CCHHHHHHHHHHHhhhcCCCcceEEEEeCCc-hhHHHHHHccccccCCCCCCCccEEEEEeCCC----ccccceEcCChh
Q 003025 756 VSKGVVAEKIFTTMAESGRHADFVLCIGDDR-SDEDMFEIIGNATSSGVLSSNASVFACTVGQK----PSKAKYYLDDAA 830 (856)
Q Consensus 756 vsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~-ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~----~s~A~y~l~~~~ 830 (856)
-.|+.+++.+++++ |++++++++|||+. ||++|++.+|.. ++.+..|+. +..|.|++++..
T Consensus 158 kp~~~~~~~~~~~l---gi~~~~~~~iGD~~~nDi~~a~~aG~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (235)
T 2om6_A 158 KPRKEMFEKVLNSF---EVKPEESLHIGDTYAEDYQGARKVGMW-----------AVWINQEGDKVRKLEERGFEIPSIA 223 (235)
T ss_dssp TTCHHHHHHHHHHT---TCCGGGEEEEESCTTTTHHHHHHTTSE-----------EEEECTTCCSCEEEETTEEEESSGG
T ss_pred CCCHHHHHHHHHHc---CCCccceEEECCChHHHHHHHHHCCCE-----------EEEECCCCCCcccCCCCcchHhhHH
Confidence 34789999999999 99999999999999 999999999974 233333533 234788999999
Q ss_pred HHHHHHHHHH
Q 003025 831 EVVTMLEALA 840 (856)
Q Consensus 831 eV~~~L~~L~ 840 (856)
++.++|+.+.
T Consensus 224 el~~~l~~~~ 233 (235)
T 2om6_A 224 NLKDVIELIS 233 (235)
T ss_dssp GHHHHHHHTC
T ss_pred HHHHHHHHHh
Confidence 9999888764
|
| >1yv9_A Hydrolase, haloacid dehalogenase family; hypothetical protein, struc genomics, PSI, protein structure initiative; 2.80A {Enterococcus faecalis} SCOP: c.108.1.14 | Back alignment and structure |
|---|
Probab=98.84 E-value=8.4e-09 Score=108.71 Aligned_cols=205 Identities=12% Similarity=0.113 Sum_probs=111.9
Q ss_pred CCcEEEEEecCCCCCCCCCCCCCCCHHHHHHHHHHHhhCCCeEEEecCCChhhHHHhhcCCCC-cc-------EEeeCCE
Q 003025 589 SKSRAILFDYDGTVMPQTSINKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSPCKK-LG-------IAAEHGY 660 (856)
Q Consensus 589 s~~rlI~~DlDGTLl~~~~~~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~~~~-lg-------liaenG~ 660 (856)
.++|+|+||+||||++ ....+ +.+.++|+.| ++.|+.++++|||+......+...+.. ++ +++.+|.
T Consensus 3 ~~~k~v~fDlDGTL~~---~~~~~-~~~~~~l~~l-~~~g~~~~~~t~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~ 77 (264)
T 1yv9_A 3 LDYQGYLIDLDGTIYL---GKEPI-PAGKRFVERL-QEKDLPFLFVTNNTTKSPETVAQRLANEFDIHVPASLVYTATLA 77 (264)
T ss_dssp CSCCEEEECCBTTTEE---TTEEC-HHHHHHHHHH-HHTTCCEEEEECCCSSCHHHHHHHHHHHSCCCCCGGGEEEHHHH
T ss_pred ccCCEEEEeCCCeEEe---CCEEC-cCHHHHHHHH-HHCCCeEEEEeCCCCCCHHHHHHHHHHhcCCCCChhhEEcHHHH
Confidence 3579999999999998 55555 7888999997 778999999999998776665533211 22 2222222
Q ss_pred EEEe-----CCCcceEecCCCCcccHHHHHHHHHHHHhhcCCcceEEecccc-eEEeeecCCCCCCchhHHHHHHHHHHH
Q 003025 661 FMRW-----SADEEWQNCGQSVDFGWIQIAEPVMKLYTESTDGSYIEIKESA-LVWHHRDADPGFGSSQAKELLDHLESV 734 (856)
Q Consensus 661 ~I~~-----~~~~~w~~~~~~~~~~w~~~v~~i~~~~~~~~~Gs~ie~k~~~-l~~~~~~~dp~~~~~~a~el~~~L~~~ 734 (856)
.+.. .+...+. . .. ..+...++.+ |..+...... +...+. .......+.++++.|.
T Consensus 78 ~~~~~~~~~~~~~~~~-~---g~----~~l~~~l~~~-----g~~~~~~~~~~v~~~~~---~~~~~~~~~~~l~~l~-- 139 (264)
T 1yv9_A 78 TIDYMKEANRGKKVFV-I---GE----AGLIDLILEA-----GFEWDETNPDYVVVGLD---TELSYEKVVLATLAIQ-- 139 (264)
T ss_dssp HHHHHHHHCCCSEEEE-E---SC----HHHHHHHHHT-----TCEECSSSCSEEEECCC---TTCCHHHHHHHHHHHH--
T ss_pred HHHHHHhhCCCCEEEE-E---eC----HHHHHHHHHc-----CCcccCCCCCEEEEECC---CCcCHHHHHHHHHHHh--
Confidence 1100 0000000 0 00 0111111111 2111111111 111111 1111223445555553
Q ss_pred hcCCCeEEEEcC-eEE----EEEe-----------------CCCCHH--HHHHHHHHHhhhcCCCcceEEEEeCC-chhH
Q 003025 735 LANEPAAVKSGQ-FIV----EVKP-----------------QGVSKG--VVAEKIFTTMAESGRHADFVLCIGDD-RSDE 789 (856)
Q Consensus 735 l~~~~~~v~~g~-~~v----EI~p-----------------~gvsKG--~al~~Ll~~l~~~gi~~d~vlaiGD~-~ND~ 789 (856)
.+... +.++. ... .+.+ .+..|. .+++.+++++ |++++++++|||+ .||+
T Consensus 140 -~g~~~-i~tn~~~~~~~~~~~~~~~~~l~~~f~~~~~~~~~~~~KP~p~~~~~~~~~~---~~~~~~~~~vGD~~~~Di 214 (264)
T 1yv9_A 140 -KGALF-IGTNPDKNIPTERGLLPGAGSVVTFVETATQTKPVYIGKPKAIIMERAIAHL---GVEKEQVIMVGDNYETDI 214 (264)
T ss_dssp -TTCEE-EESCCCSEEEETTEEEECHHHHHHHHHHHHTCCCEECSTTSHHHHHHHHHHH---CSCGGGEEEEESCTTTHH
T ss_pred -CCCEE-EEECCCCcccCCCCcccCCcHHHHHHHHHhCCCccccCCCCHHHHHHHHHHc---CCCHHHEEEECCCcHHHH
Confidence 22223 32222 211 1111 134565 4899999999 9999999999999 6999
Q ss_pred HHHHHccccccCCCCCCCccEEEEEeCCCc--------cccceEcCChhHH
Q 003025 790 DMFEIIGNATSSGVLSSNASVFACTVGQKP--------SKAKYYLDDAAEV 832 (856)
Q Consensus 790 ~Mf~~ag~~~~~~~~~~~~~~~av~vG~~~--------s~A~y~l~~~~eV 832 (856)
.|.+.+|.. ++.|..|... ..|+|++++..++
T Consensus 215 ~~a~~aG~~-----------~i~v~~g~~~~~~l~~~~~~~d~v~~~l~el 254 (264)
T 1yv9_A 215 QSGIQNGID-----------SLLVTSGFTPKSAVPTLPTPPTYVVDSLDEW 254 (264)
T ss_dssp HHHHHHTCE-----------EEEETTSSSCSSSTTTCSSCCSEEESSGGGC
T ss_pred HHHHHcCCc-----------EEEECCCCCCHHHHHhcCCCCCEEEecHHHH
Confidence 999999973 2445555431 1588888876653
|
| >2go7_A Hydrolase, haloacid dehalogenase-like family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.10A {Streptococcus pneumoniae} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=98.84 E-value=9.7e-11 Score=117.04 Aligned_cols=67 Identities=16% Similarity=0.167 Sum_probs=54.4
Q ss_pred CCCH--HHHHHHHHHHhhhcCCCcceEEEEeCCchhHHHHHHccccccCCCCCCCccEEEEEeCCCccccceEcCChhHH
Q 003025 755 GVSK--GVVAEKIFTTMAESGRHADFVLCIGDDRSDEDMFEIIGNATSSGVLSSNASVFACTVGQKPSKAKYYLDDAAEV 832 (856)
Q Consensus 755 gvsK--G~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~~s~A~y~l~~~~eV 832 (856)
+..| +.+++.+++++ |++++++++|||+.||++|++.+|.. ++.+++..+.|+|++++..++
T Consensus 137 ~~~Kp~~~~~~~~~~~~---~i~~~~~~~iGD~~nDi~~~~~aG~~-------------~i~~~~~~~~a~~v~~~~~el 200 (207)
T 2go7_A 137 FVRKPSPEAATYLLDKY---QLNSDNTYYIGDRTLDVEFAQNSGIQ-------------SINFLESTYEGNHRIQALADI 200 (207)
T ss_dssp CCCTTSSHHHHHHHHHH---TCCGGGEEEEESSHHHHHHHHHHTCE-------------EEESSCCSCTTEEECSSTTHH
T ss_pred CCCCCCcHHHHHHHHHh---CCCcccEEEECCCHHHHHHHHHCCCe-------------EEEEecCCCCCCEEeCCHHHH
Confidence 3445 89999999999 99999999999999999999999973 344443213789999999998
Q ss_pred HHHHH
Q 003025 833 VTMLE 837 (856)
Q Consensus 833 ~~~L~ 837 (856)
.++|+
T Consensus 201 ~~~l~ 205 (207)
T 2go7_A 201 SRIFE 205 (207)
T ss_dssp HHHTS
T ss_pred HHHHh
Confidence 77663
|
| >2no4_A (S)-2-haloacid dehalogenase IVA; HAD superfamily, rossman fold, hydrol; 1.93A {Burkholderia cepacia} PDB: 2no5_A* | Back alignment and structure |
|---|
Probab=98.83 E-value=4.7e-09 Score=108.61 Aligned_cols=70 Identities=10% Similarity=0.028 Sum_probs=56.4
Q ss_pred CHHHHHHHHHHHhhhcCCCcceEEEEeCCchhHHHHHHccccccCCCCCCCccEEEEEeCCC----cccc-ceEcCChhH
Q 003025 757 SKGVVAEKIFTTMAESGRHADFVLCIGDDRSDEDMFEIIGNATSSGVLSSNASVFACTVGQK----PSKA-KYYLDDAAE 831 (856)
Q Consensus 757 sKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~----~s~A-~y~l~~~~e 831 (856)
.|+.+++.+++++ |++++++++|||+.||+.|++.+|.. ++.|..|+. ...| .|++++..+
T Consensus 162 p~~~~~~~~~~~~---~~~~~~~~~iGD~~~Di~~a~~aG~~-----------~~~v~~~~~~~~~~~~~~~~~~~~~~e 227 (240)
T 2no4_A 162 PDPRIYQFACDRL---GVNPNEVCFVSSNAWDLGGAGKFGFN-----------TVRINRQGNPPEYEFAPLKHQVNSLSE 227 (240)
T ss_dssp TSHHHHHHHHHHH---TCCGGGEEEEESCHHHHHHHHHHTCE-----------EEEECTTCCCCCCTTSCCSEEESSGGG
T ss_pred CCHHHHHHHHHHc---CCCcccEEEEeCCHHHHHHHHHCCCE-----------EEEECCCCCCCcccCCCCceeeCCHHH
Confidence 4788899999999 99999999999999999999999973 344555543 2456 899999999
Q ss_pred HHHHHHHHH
Q 003025 832 VVTMLEALA 840 (856)
Q Consensus 832 V~~~L~~L~ 840 (856)
+.++|..+.
T Consensus 228 l~~~l~~~~ 236 (240)
T 2no4_A 228 LWPLLAKNV 236 (240)
T ss_dssp HHHHHCC--
T ss_pred HHHHHHHhh
Confidence 998887655
|
| >3s6j_A Hydrolase, haloacid dehalogenase-like family; structural genomics, PSI-2; 2.20A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=98.82 E-value=2.1e-09 Score=109.97 Aligned_cols=75 Identities=17% Similarity=0.107 Sum_probs=62.2
Q ss_pred eCCCCHHHHHHHHHHHhhhcCCCcceEEEEeCCchhHHHHHHccccccCCCCCCCccEEEEEeCCC------ccccceEc
Q 003025 753 PQGVSKGVVAEKIFTTMAESGRHADFVLCIGDDRSDEDMFEIIGNATSSGVLSSNASVFACTVGQK------PSKAKYYL 826 (856)
Q Consensus 753 p~gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~------~s~A~y~l 826 (856)
+.+..|+.+++.+++++ |++++++++|||+.||++|++.+|.. ++.|+.|.. ...|+|++
T Consensus 144 ~~~kp~~~~~~~~~~~l---~~~~~~~i~iGD~~~Di~~a~~aG~~-----------~i~v~~g~~~~~~l~~~~ad~v~ 209 (233)
T 3s6j_A 144 SYGKPDPDLFLAAAKKI---GAPIDECLVIGDAIWDMLAARRCKAT-----------GVGLLSGGYDIGELERAGALRVY 209 (233)
T ss_dssp SCCTTSTHHHHHHHHHT---TCCGGGEEEEESSHHHHHHHHHTTCE-----------EEEEGGGSCCHHHHHHTTCSEEE
T ss_pred CCCCCChHHHHHHHHHh---CCCHHHEEEEeCCHHhHHHHHHCCCE-----------EEEEeCCCCchHhHHhcCCCEEE
Confidence 45677899999999999 99999999999999999999999973 355666632 23589999
Q ss_pred CChhHHHHHHHHHHH
Q 003025 827 DDAAEVVTMLEALAE 841 (856)
Q Consensus 827 ~~~~eV~~~L~~L~~ 841 (856)
++..++.++|++...
T Consensus 210 ~~~~el~~~l~~~~~ 224 (233)
T 3s6j_A 210 EDPLDLLNHLDEIAS 224 (233)
T ss_dssp SSHHHHHHTGGGTCC
T ss_pred CCHHHHHHHHHHHhh
Confidence 999999988876654
|
| >1te2_A Putative phosphatase; structural genomics, phosphates, PSI, protein S initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Escherichia coli} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=98.81 E-value=3.8e-09 Score=107.15 Aligned_cols=64 Identities=9% Similarity=-0.026 Sum_probs=51.1
Q ss_pred CHHHHHHHHHHHhhhcCCCcceEEEEeCCchhHHHHHHccccccCCCCCCCccEEEEEeC-CC----ccccceEcCChhH
Q 003025 757 SKGVVAEKIFTTMAESGRHADFVLCIGDDRSDEDMFEIIGNATSSGVLSSNASVFACTVG-QK----PSKAKYYLDDAAE 831 (856)
Q Consensus 757 sKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG-~~----~s~A~y~l~~~~e 831 (856)
.|+.+++.+++++ |++++++++|||+.||++|++.+|.. ++.|..| +. +..|+|++++.++
T Consensus 151 p~~~~~~~~~~~~---~i~~~~~i~iGD~~nDi~~a~~aG~~-----------~~~~~~~~~~~~~~~~~a~~v~~~~~e 216 (226)
T 1te2_A 151 PHPQVYLDCAAKL---GVDPLTCVALEDSVNGMIASKAARMR-----------SIVVPAPEAQNDPRFVLANVKLSSLTE 216 (226)
T ss_dssp TSTHHHHHHHHHH---TSCGGGEEEEESSHHHHHHHHHTTCE-----------EEECCCTTTTTCGGGGGSSEECSCGGG
T ss_pred CChHHHHHHHHHc---CCCHHHeEEEeCCHHHHHHHHHcCCE-----------EEEEcCCCCcccccccccCeEECCHHH
Confidence 4499999999999 99999999999999999999999973 1223333 22 4678999998887
Q ss_pred HHH
Q 003025 832 VVT 834 (856)
Q Consensus 832 V~~ 834 (856)
+..
T Consensus 217 l~~ 219 (226)
T 1te2_A 217 LTA 219 (226)
T ss_dssp CCH
T ss_pred HhH
Confidence 654
|
| >3sd7_A Putative phosphatase; structural genomics, haloacid dehalogenase-like hydrolase, H center for structural genomics of infectious diseases; HET: PGE; 1.70A {Clostridium difficile} | Back alignment and structure |
|---|
Probab=98.79 E-value=4.5e-09 Score=108.62 Aligned_cols=71 Identities=20% Similarity=0.262 Sum_probs=60.1
Q ss_pred EeCCCCHHHHHHHHHHHhhhcCCC-cceEEEEeCCchhHHHHHHccccccCCCCCCCccEEEEEeCCC------ccccce
Q 003025 752 KPQGVSKGVVAEKIFTTMAESGRH-ADFVLCIGDDRSDEDMFEIIGNATSSGVLSSNASVFACTVGQK------PSKAKY 824 (856)
Q Consensus 752 ~p~gvsKG~al~~Ll~~l~~~gi~-~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~------~s~A~y 824 (856)
.+.+..|+.+++.+++++ |++ ++++++|||+.||++|++.+|.. ++.|+.|+. +..|+|
T Consensus 162 ~~~~kp~~~~~~~~~~~~---g~~~~~~~i~vGD~~~Di~~a~~aG~~-----------~i~v~~g~~~~~~~~~~~ad~ 227 (240)
T 3sd7_A 162 DGTRVNKNEVIQYVLDLC---NVKDKDKVIMVGDRKYDIIGAKKIGID-----------SIGVLYGYGSFEEISESEPTY 227 (240)
T ss_dssp TSCCCCHHHHHHHHHHHH---TCCCGGGEEEEESSHHHHHHHHHHTCE-----------EEEESSSSCCHHHHHHHCCSE
T ss_pred cCCCCCCHHHHHHHHHHc---CCCCCCcEEEECCCHHHHHHHHHCCCC-----------EEEEeCCCCCHHHHhhcCCCE
Confidence 456778999999999999 999 99999999999999999999973 356666653 267899
Q ss_pred EcCChhHHHHHH
Q 003025 825 YLDDAAEVVTML 836 (856)
Q Consensus 825 ~l~~~~eV~~~L 836 (856)
++++..++.++|
T Consensus 228 v~~~~~el~~~l 239 (240)
T 3sd7_A 228 IVENVESIKDIL 239 (240)
T ss_dssp EESSSTTHHHHH
T ss_pred EECCHHHHHHHh
Confidence 999999888775
|
| >3nas_A Beta-PGM, beta-phosphoglucomutase; PSI, structural genomics, protein structure initiative, NEW research center for structural genomics; 3.00A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=98.77 E-value=7.7e-10 Score=113.64 Aligned_cols=76 Identities=13% Similarity=0.078 Sum_probs=51.1
Q ss_pred CCCCHHHHHHHHHHHhhhcCCCcceEEEEeCCchhHHHHHHccccccCCCCCCCccEEEEEeCCC--ccccceEcCChhH
Q 003025 754 QGVSKGVVAEKIFTTMAESGRHADFVLCIGDDRSDEDMFEIIGNATSSGVLSSNASVFACTVGQK--PSKAKYYLDDAAE 831 (856)
Q Consensus 754 ~gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~--~s~A~y~l~~~~e 831 (856)
.+..|+.+++.+++++ |++++++++|||+.||+.|++.+|.. ++.++.. ...|+|++++.++
T Consensus 144 ~~Kp~~~~~~~~~~~l---gi~~~~~i~vGDs~~Di~~a~~aG~~-------------~~~~~~~~~~~~ad~v~~s~~e 207 (233)
T 3nas_A 144 KGKPDPDIFLTAAAML---DVSPADCAAIEDAEAGISAIKSAGMF-------------AVGVGQGQPMLGADLVVRQTSD 207 (233)
T ss_dssp -----CCHHHHHHHHH---TSCGGGEEEEECSHHHHHHHHHTTCE-------------EEECC-------CSEECSSGGG
T ss_pred CCCCChHHHHHHHHHc---CCCHHHEEEEeCCHHHHHHHHHcCCE-------------EEEECCccccccCCEEeCChHh
Confidence 3444778999999999 99999999999999999999999973 2333221 2389999987655
Q ss_pred --HHHHHHHHHHhcCC
Q 003025 832 --VVTMLEALAEASAP 845 (856)
Q Consensus 832 --V~~~L~~L~~~~~~ 845 (856)
+..+++.+.....+
T Consensus 208 l~~~~~~~~~~~~~~~ 223 (233)
T 3nas_A 208 LTLELLHEEWEQYRIR 223 (233)
T ss_dssp CCHHHHHHHHHHHHHT
T ss_pred CCHHHHHHHHHHHHhh
Confidence 34555555444333
|
| >2wm8_A MDP-1, magnesium-dependent phosphatase 1; haloacid dehalogenase, protein phosphatase, hydrolase, magne metal-binding; 1.75A {Homo sapiens} PDB: 1u7o_A 1u7p_A | Back alignment and structure |
|---|
Probab=98.77 E-value=2.1e-08 Score=100.28 Aligned_cols=69 Identities=12% Similarity=0.089 Sum_probs=51.1
Q ss_pred CHHHHHHHHHcCCcEEEEEecCCCCCCCC---------------------CCCCCCCHHHHHHHHHHHhhCCCeEEEecC
Q 003025 578 SIDAIVSAYLRSKSRAILFDYDGTVMPQT---------------------SINKAPSQAVISIINTLCNDARNTVFVVSG 636 (856)
Q Consensus 578 ~~~~i~~~y~~s~~rlI~~DlDGTLl~~~---------------------~~~~~~s~~~~~aL~~L~~d~g~~V~I~TG 636 (856)
..+.+...-...++|+|+||+||||++.. .....+.+.+.++|++| ++.|+.++|+||
T Consensus 14 ~~~~~~~~~m~~~~k~vifDlDGTL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~e~L~~L-~~~G~~v~ivT~ 92 (187)
T 2wm8_A 14 GTENLYFQSMARLPKLAVFDLDYTLWPFWVDTHVDPPFHKSSDGTVRDRRGQDVRLYPEVPEVLKRL-QSLGVPGAAASR 92 (187)
T ss_dssp CHHHHHHHHHHTSCSEEEECSBTTTBSSCTTTSSCSCCEECTTSCEECTTCCEECCCTTHHHHHHHH-HHHTCCEEEEEC
T ss_pred CCchhHHHHHHhccCEEEEcCCCCcchHHHhhccCcchhhhcccchhhccCcccCcchhHHHHHHHH-HHCCceEEEEeC
Confidence 33444444344578999999999999421 02235678899999997 777999999999
Q ss_pred CC-hhhHHHhhc
Q 003025 637 RG-RDCLGKWFS 647 (856)
Q Consensus 637 R~-~~~l~~~~~ 647 (856)
++ ...+..++.
T Consensus 93 ~~~~~~~~~~l~ 104 (187)
T 2wm8_A 93 TSEIEGANQLLE 104 (187)
T ss_dssp CSCHHHHHHHHH
T ss_pred CCChHHHHHHHH
Confidence 99 677777774
|
| >2pke_A Haloacid delahogenase-like family hydrolase; NP_639141.1, ST genomics, joint center for structural genomics, JCSG; 1.81A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=98.76 E-value=1.4e-08 Score=105.83 Aligned_cols=70 Identities=14% Similarity=0.153 Sum_probs=56.5
Q ss_pred HHHHHHHHHHHhhhcCCCcceEEEEeCCc-hhHHHHHHccccccCCCCCCCccEEEEEeCCC----------ccccce-E
Q 003025 758 KGVVAEKIFTTMAESGRHADFVLCIGDDR-SDEDMFEIIGNATSSGVLSSNASVFACTVGQK----------PSKAKY-Y 825 (856)
Q Consensus 758 KG~al~~Ll~~l~~~gi~~d~vlaiGD~~-ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~----------~s~A~y-~ 825 (856)
++.+++.+++++ |++++++++|||+. ||+.|++.+|.. ++.|..|.. ...+++ +
T Consensus 164 ~~~~~~~~~~~l---~~~~~~~i~iGD~~~~Di~~a~~aG~~-----------~~~v~~~~~~~~~~~~~~~~~~~~~~~ 229 (251)
T 2pke_A 164 DPQTYARVLSEF---DLPAERFVMIGNSLRSDVEPVLAIGGW-----------GIYTPYAVTWAHEQDHGVAADEPRLRE 229 (251)
T ss_dssp SHHHHHHHHHHH---TCCGGGEEEEESCCCCCCHHHHHTTCE-----------EEECCCC-------------CCTTEEE
T ss_pred CHHHHHHHHHHh---CcCchhEEEECCCchhhHHHHHHCCCE-----------EEEECCCCccccccccccccCCCCeee
Confidence 799999999999 99999999999999 999999999974 233433321 235787 8
Q ss_pred cCChhHHHHHHHHHHH
Q 003025 826 LDDAAEVVTMLEALAE 841 (856)
Q Consensus 826 l~~~~eV~~~L~~L~~ 841 (856)
+++..++..+|+.+..
T Consensus 230 i~~~~el~~~l~~~~~ 245 (251)
T 2pke_A 230 VPDPSGWPAAVRALDA 245 (251)
T ss_dssp CSSGGGHHHHHHHHHH
T ss_pred eCCHHHHHHHHHHhCh
Confidence 9999999999988763
|
| >4ap9_A Phosphoserine phosphatase; hydrolase, haloacid dehalogenase superfamily, NDSB; HET: 1PS; 1.78A {Thermococcus onnurineus} PDB: 4b6j_A | Back alignment and structure |
|---|
Probab=98.74 E-value=8.4e-08 Score=95.49 Aligned_cols=66 Identities=26% Similarity=0.450 Sum_probs=56.4
Q ss_pred EEeCCCCHHHHHHHHHHHhhhcCCCcceEEEEeCCchhHHHHHHccccccCCCCCCCccEEEEEeCCCccccceEcCChh
Q 003025 751 VKPQGVSKGVVAEKIFTTMAESGRHADFVLCIGDDRSDEDMFEIIGNATSSGVLSSNASVFACTVGQKPSKAKYYLDDAA 830 (856)
Q Consensus 751 I~p~gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~~s~A~y~l~~~~ 830 (856)
..|...+|+.+++.+ +++++++|||+.||++|++.+|. +|++++....|+|++++.+
T Consensus 134 ~~~~~~~k~~~l~~l---------~~~~~i~iGD~~~Di~~~~~ag~--------------~v~~~~~~~~ad~v~~~~~ 190 (201)
T 4ap9_A 134 IRLRFRDKGEFLKRF---------RDGFILAMGDGYADAKMFERADM--------------GIAVGREIPGADLLVKDLK 190 (201)
T ss_dssp EECCSSCHHHHHGGG---------TTSCEEEEECTTCCHHHHHHCSE--------------EEEESSCCTTCSEEESSHH
T ss_pred CcCCccCHHHHHHhc---------CcCcEEEEeCCHHHHHHHHhCCc--------------eEEECCCCccccEEEccHH
Confidence 566667899998876 47899999999999999999985 5778876559999999999
Q ss_pred HHHHHHHHH
Q 003025 831 EVVTMLEAL 839 (856)
Q Consensus 831 eV~~~L~~L 839 (856)
++.++|+.+
T Consensus 191 el~~~l~~l 199 (201)
T 4ap9_A 191 ELVDFIKNL 199 (201)
T ss_dssp HHHHHHHTC
T ss_pred HHHHHHHHh
Confidence 999998865
|
| >3ed5_A YFNB; APC60080, bacillus subtilis subsp. subtilis STR. 168, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.72A {Bacillus subtilis} PDB: 3i76_A | Back alignment and structure |
|---|
Probab=98.74 E-value=1.9e-10 Score=118.17 Aligned_cols=71 Identities=17% Similarity=0.124 Sum_probs=58.7
Q ss_pred CCCCHHHHHHHHHHHhhhcC-CCcceEEEEeCCc-hhHHHHHHccccccCCCCCCCccEEEEEeCCC----ccccceEcC
Q 003025 754 QGVSKGVVAEKIFTTMAESG-RHADFVLCIGDDR-SDEDMFEIIGNATSSGVLSSNASVFACTVGQK----PSKAKYYLD 827 (856)
Q Consensus 754 ~gvsKG~al~~Ll~~l~~~g-i~~d~vlaiGD~~-ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~----~s~A~y~l~ 827 (856)
.+..|+.+++.+++++ | ++++++++|||+. ||+.|++.+|.. ++.+..|+. +..|+|+++
T Consensus 156 ~~kp~~~~~~~~~~~~---g~~~~~~~i~vGD~~~~Di~~a~~aG~~-----------~i~~~~~~~~~~~~~~ad~v~~ 221 (238)
T 3ed5_A 156 FQKPMKEYFNYVFERI---PQFSAEHTLIIGDSLTADIKGGQLAGLD-----------TCWMNPDMKPNVPEIIPTYEIR 221 (238)
T ss_dssp SCTTCHHHHHHHHHTS---TTCCGGGEEEEESCTTTTHHHHHHTTCE-----------EEEECTTCCCCTTCCCCSEEES
T ss_pred CCCCChHHHHHHHHHc---CCCChhHeEEECCCcHHHHHHHHHCCCE-----------EEEECCCCCCCcccCCCCeEEC
Confidence 4556799999999999 9 9999999999998 999999999973 234444432 467899999
Q ss_pred ChhHHHHHHHH
Q 003025 828 DAAEVVTMLEA 838 (856)
Q Consensus 828 ~~~eV~~~L~~ 838 (856)
+..++.++|+.
T Consensus 222 ~~~el~~~l~~ 232 (238)
T 3ed5_A 222 KLEELYHILNI 232 (238)
T ss_dssp SGGGHHHHHTC
T ss_pred CHHHHHHHHHh
Confidence 99999888865
|
| >1zjj_A Hypothetical protein PH1952; alpha/beta hydrolase fold, HAD superfamily, structural genom riken structural genomics/proteomics initiative; 1.85A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=98.74 E-value=4e-09 Score=111.50 Aligned_cols=52 Identities=21% Similarity=0.258 Sum_probs=42.5
Q ss_pred cEEEEEecCCCCCCCCCCCCCCCHHHHHHHHHHHhhCCCeEEEecCCChhhHHHhhc
Q 003025 591 SRAILFDYDGTVMPQTSINKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFS 647 (856)
Q Consensus 591 ~rlI~~DlDGTLl~~~~~~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~ 647 (856)
+|+|+||+||||++ ....+ +.+.++|++| ++.|+.|+++|||+......+..
T Consensus 1 ik~i~~D~DGtL~~---~~~~~-~~~~~~l~~l-~~~g~~~~~~T~r~~~~~~~~~~ 52 (263)
T 1zjj_A 1 MVAIIFDMDGVLYR---GNRAI-PGVRELIEFL-KERGIPFAFLTNNSTKTPEMYRE 52 (263)
T ss_dssp CEEEEEECBTTTEE---TTEEC-TTHHHHHHHH-HHHTCCEEEEESCCSSCHHHHHH
T ss_pred CeEEEEeCcCceEe---CCEeC-ccHHHHHHHH-HHCCCeEEEEeCCCCCCHHHHHH
Confidence 48999999999998 44444 6889999997 77899999999999866555554
|
| >4eek_A Beta-phosphoglucomutase-related protein; hydrolase, magnesium binding site, enzyme function initiativ; 1.60A {Deinococcus radiodurans} PDB: 4eel_A* 4een_A | Back alignment and structure |
|---|
Probab=98.72 E-value=1.5e-09 Score=113.63 Aligned_cols=73 Identities=15% Similarity=0.086 Sum_probs=60.5
Q ss_pred CCCCHHHHHHHHHHHhhhcCCCcceEEEEeCCchhHHHHHHccccccCCCCCCCccEEEEEeCCC----------ccccc
Q 003025 754 QGVSKGVVAEKIFTTMAESGRHADFVLCIGDDRSDEDMFEIIGNATSSGVLSSNASVFACTVGQK----------PSKAK 823 (856)
Q Consensus 754 ~gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~----------~s~A~ 823 (856)
.+..|+.+++.+++++ |++++++++|||+.||+.|++.+|.. ++.|..|.. ...|+
T Consensus 166 ~~Kp~~~~~~~~~~~l---gi~~~~~i~iGD~~~Di~~a~~aG~~-----------~i~v~~g~~~~~~~~~~~~~~~ad 231 (259)
T 4eek_A 166 RGKPHPDLYTFAAQQL---GILPERCVVIEDSVTGGAAGLAAGAT-----------LWGLLVPGHPHPDGAAALSRLGAA 231 (259)
T ss_dssp CCTTSSHHHHHHHHHT---TCCGGGEEEEESSHHHHHHHHHHTCE-----------EEEECCTTSCCSSCHHHHHHHTCS
T ss_pred CCCCChHHHHHHHHHc---CCCHHHEEEEcCCHHHHHHHHHCCCE-----------EEEEccCCCcccccHHHHHhcCcc
Confidence 4556799999999999 99999999999999999999999973 344555532 24589
Q ss_pred eEcCChhHHHHHHHHHH
Q 003025 824 YYLDDAAEVVTMLEALA 840 (856)
Q Consensus 824 y~l~~~~eV~~~L~~L~ 840 (856)
|++++..++.++|+...
T Consensus 232 ~vi~~l~el~~~l~~~~ 248 (259)
T 4eek_A 232 RVLTSHAELRAALAEAG 248 (259)
T ss_dssp EEECSHHHHHHHHHHTT
T ss_pred hhhCCHHHHHHHHHhcc
Confidence 99999999999998753
|
| >3um9_A Haloacid dehalogenase, type II; haloacid dehalogenase-like hydrolase protein superfamily, defluorinase, hydrolase; 2.19A {Polaromonas SP} | Back alignment and structure |
|---|
Probab=98.72 E-value=2.4e-08 Score=101.91 Aligned_cols=71 Identities=11% Similarity=0.027 Sum_probs=56.9
Q ss_pred CCCHHHHHHHHHHHhhhcCCCcceEEEEeCCchhHHHHHHccccccCCCCCCCccEEEEEeCC-C----ccccceEcCCh
Q 003025 755 GVSKGVVAEKIFTTMAESGRHADFVLCIGDDRSDEDMFEIIGNATSSGVLSSNASVFACTVGQ-K----PSKAKYYLDDA 829 (856)
Q Consensus 755 gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~-~----~s~A~y~l~~~ 829 (856)
+..|+.+++.+++++ |++++++++|||+.||+.|++.+|.. ++.|..|. . +..|+|++++.
T Consensus 151 ~kp~~~~~~~~~~~~---~~~~~~~~~iGD~~~Di~~a~~aG~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (230)
T 3um9_A 151 FKPHQKVYELAMDTL---HLGESEILFVSCNSWDATGAKYFGYP-----------VCWINRSNGVFDQLGVVPDIVVSDV 216 (230)
T ss_dssp CTTCHHHHHHHHHHH---TCCGGGEEEEESCHHHHHHHHHHTCC-----------EEEECTTSCCCCCSSCCCSEEESSH
T ss_pred CCCChHHHHHHHHHh---CCCcccEEEEeCCHHHHHHHHHCCCE-----------EEEEeCCCCccccccCCCcEEeCCH
Confidence 445789999999999 99999999999999999999999974 23333332 1 35789999999
Q ss_pred hHHHHHHHHH
Q 003025 830 AEVVTMLEAL 839 (856)
Q Consensus 830 ~eV~~~L~~L 839 (856)
.++.++|+.+
T Consensus 217 ~el~~~l~~~ 226 (230)
T 3um9_A 217 GVLASRFSPV 226 (230)
T ss_dssp HHHHHTCCC-
T ss_pred HHHHHHHHHh
Confidence 9998887765
|
| >2qlt_A (DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, saccharom cerevisiae, structural genomics, PSI-2, protein structure initiative; 1.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=98.71 E-value=1.1e-09 Score=116.65 Aligned_cols=66 Identities=11% Similarity=0.031 Sum_probs=53.8
Q ss_pred eCCCCHHHHHHHHHHHhhhcCC-------CcceEEEEeCCchhHHHHHHccccccCCCCCCCccEEEEEeCCC-----cc
Q 003025 753 PQGVSKGVVAEKIFTTMAESGR-------HADFVLCIGDDRSDEDMFEIIGNATSSGVLSSNASVFACTVGQK-----PS 820 (856)
Q Consensus 753 p~gvsKG~al~~Ll~~l~~~gi-------~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~-----~s 820 (856)
+.+..|+.+++.+++++ |+ +++++++|||+.||++|++.+|.. ++.|+.|+. +.
T Consensus 167 ~~~kp~~~~~~~~~~~l---gi~~~~~~~~~~~~i~~GDs~nDi~~a~~AG~~-----------~i~v~~~~~~~~~~~~ 232 (275)
T 2qlt_A 167 KQGKPHPEPYLKGRNGL---GFPINEQDPSKSKVVVFEDAPAGIAAGKAAGCK-----------IVGIATTFDLDFLKEK 232 (275)
T ss_dssp SSCTTSSHHHHHHHHHT---TCCCCSSCGGGSCEEEEESSHHHHHHHHHTTCE-----------EEEESSSSCHHHHTTS
T ss_pred CCCCCChHHHHHHHHHc---CCCccccCCCcceEEEEeCCHHHHHHHHHcCCE-----------EEEECCCCCHHHHhhC
Confidence 56677999999999999 99 999999999999999999999974 345555543 24
Q ss_pred ccceEcCChhHH
Q 003025 821 KAKYYLDDAAEV 832 (856)
Q Consensus 821 ~A~y~l~~~~eV 832 (856)
.|+|++++.+++
T Consensus 233 ~ad~v~~~~~el 244 (275)
T 2qlt_A 233 GCDIIVKNHESI 244 (275)
T ss_dssp SCSEEESSGGGE
T ss_pred CCCEEECChHHc
Confidence 688998877653
|
| >3e58_A Putative beta-phosphoglucomutase; structu genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.86A {Streptococcus thermophilus lmg 18311} | Back alignment and structure |
|---|
Probab=98.70 E-value=4.8e-09 Score=105.33 Aligned_cols=68 Identities=18% Similarity=0.137 Sum_probs=53.9
Q ss_pred CCCCHHHHHHHHHHHhhhcCCCcceEEEEeCCchhHHHHHHccccccCCCCCCCccEEEEEeCC---CccccceEcCChh
Q 003025 754 QGVSKGVVAEKIFTTMAESGRHADFVLCIGDDRSDEDMFEIIGNATSSGVLSSNASVFACTVGQ---KPSKAKYYLDDAA 830 (856)
Q Consensus 754 ~gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~---~~s~A~y~l~~~~ 830 (856)
.+-.|+.+++.+++++ |++++++++|||+.||+.|++.+|.. ++.+..|. ....|.+++++..
T Consensus 143 ~~kp~~~~~~~~~~~~---~~~~~~~~~iGD~~~Di~~a~~aG~~-----------~~~~~~~~~~~~~~~a~~~~~~~~ 208 (214)
T 3e58_A 143 ESKPNPEIYLTALKQL---NVQASRALIIEDSEKGIAAGVAADVE-----------VWAIRDNEFGMDQSAAKGLLDSLT 208 (214)
T ss_dssp SCTTSSHHHHHHHHHH---TCCGGGEEEEECSHHHHHHHHHTTCE-----------EEEECCSSSCCCCTTSSEEESSGG
T ss_pred CCCCChHHHHHHHHHc---CCChHHeEEEeccHhhHHHHHHCCCE-----------EEEECCCCccchhccHHHHHHHHH
Confidence 3445789999999999 99999999999999999999999973 23333322 2377899999888
Q ss_pred HHHHH
Q 003025 831 EVVTM 835 (856)
Q Consensus 831 eV~~~ 835 (856)
++.++
T Consensus 209 el~~~ 213 (214)
T 3e58_A 209 DVLDL 213 (214)
T ss_dssp GGGGG
T ss_pred HHHhh
Confidence 77654
|
| >3umc_A Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=98.70 E-value=1.5e-08 Score=105.25 Aligned_cols=74 Identities=9% Similarity=-0.021 Sum_probs=60.7
Q ss_pred EEEeCCCCHHHHHHHHHHHhhhcCCCcceEEEEeCCchhHHHHHHccccccCCCCCCCccEEEEE----eCC-------C
Q 003025 750 EVKPQGVSKGVVAEKIFTTMAESGRHADFVLCIGDDRSDEDMFEIIGNATSSGVLSSNASVFACT----VGQ-------K 818 (856)
Q Consensus 750 EI~p~gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~----vG~-------~ 818 (856)
|..+.+..|+.+++.+++++ |++++++++|||+.||++|++.+|.. ++.+. .|. .
T Consensus 167 ~~~~~~kp~~~~~~~~~~~l---gi~~~~~~~iGD~~~Di~~a~~aG~~-----------~~~~~~~~~~g~~~~~~l~~ 232 (254)
T 3umc_A 167 DLFGHYKPDPQVYLGACRLL---DLPPQEVMLCAAHNYDLKAARALGLK-----------TAFIARPLEYGPGQSQDLAA 232 (254)
T ss_dssp HHHTCCTTSHHHHHHHHHHH---TCCGGGEEEEESCHHHHHHHHHTTCE-----------EEEECCTTTTCTTCCSSSSC
T ss_pred cccccCCCCHHHHHHHHHHc---CCChHHEEEEcCchHhHHHHHHCCCe-----------EEEEecCCccCCCCCccccc
Confidence 45567888999999999999 99999999999999999999999974 12232 232 1
Q ss_pred ccccceEcCChhHHHHHHH
Q 003025 819 PSKAKYYLDDAAEVVTMLE 837 (856)
Q Consensus 819 ~s~A~y~l~~~~eV~~~L~ 837 (856)
+..|+|++++..++.++|.
T Consensus 233 ~~~ad~v~~~l~el~~~l~ 251 (254)
T 3umc_A 233 EQDWDLIASDLLDLHRQLA 251 (254)
T ss_dssp SSCCSEEESSHHHHHHHHH
T ss_pred CCCCcEEECCHHHHHHHhc
Confidence 4578999999999988875
|
| >2o2x_A Hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; 1.50A {Mesorhizobium loti} SCOP: c.108.1.19 | Back alignment and structure |
|---|
Probab=98.70 E-value=4.9e-09 Score=107.62 Aligned_cols=71 Identities=11% Similarity=0.062 Sum_probs=55.1
Q ss_pred CCHHHHHHHHHHHhhhcCCCcceEEEEeCCchhHHHHHHccccccCCCCCCCccE-EEEEeCCC-----ccccceEcCCh
Q 003025 756 VSKGVVAEKIFTTMAESGRHADFVLCIGDDRSDEDMFEIIGNATSSGVLSSNASV-FACTVGQK-----PSKAKYYLDDA 829 (856)
Q Consensus 756 vsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~-~av~vG~~-----~s~A~y~l~~~ 829 (856)
-.|..+++.+++++ |++++++++|||+.||+.|.+.+|.. + +.|..|.. ...+.|++++.
T Consensus 137 KP~~~~~~~~~~~~---~i~~~~~~~VGD~~~Di~~a~~aG~~-----------~~i~v~~g~~~~~~~~~~~~~~i~~l 202 (218)
T 2o2x_A 137 KPNPGMLVEAGKRL---ALDLQRSLIVGDKLADMQAGKRAGLA-----------QGWLVDGEAAVQPGFAIRPLRDSSEL 202 (218)
T ss_dssp TTSCHHHHHHHHHH---TCCGGGCEEEESSHHHHHHHHHTTCS-----------EEEEETCCCEEETTEEEEEESSHHHH
T ss_pred CCCHHHHHHHHHHc---CCCHHHEEEEeCCHHHHHHHHHCCCC-----------EeEEEecCCCCcccccCCCCEecccH
Confidence 34677899999999 99999999999999999999999974 2 33444432 23577778888
Q ss_pred hHHHHHHHHHH
Q 003025 830 AEVVTMLEALA 840 (856)
Q Consensus 830 ~eV~~~L~~L~ 840 (856)
.++.++|..+.
T Consensus 203 ~el~~~l~~~~ 213 (218)
T 2o2x_A 203 GDLLAAIETLG 213 (218)
T ss_dssp HHHHHHHHHTC
T ss_pred HHHHHHHHHHh
Confidence 88888877653
|
| >3nuq_A Protein SSM1, putative nucleotide phosphatase; suppresses the 6-AU sensitivity of transcription elongation II; 1.70A {Saccharomyces cerevisiae} PDB: 3onn_A 3opx_A* | Back alignment and structure |
|---|
Probab=98.68 E-value=8.3e-10 Score=117.57 Aligned_cols=72 Identities=13% Similarity=0.075 Sum_probs=57.8
Q ss_pred eCCCCHHHHHHHHHHHhhhcCCCc-ceEEEEeCCchhHHHHHHccccccCCCCCCCccEEEEEeCCC--------ccccc
Q 003025 753 PQGVSKGVVAEKIFTTMAESGRHA-DFVLCIGDDRSDEDMFEIIGNATSSGVLSSNASVFACTVGQK--------PSKAK 823 (856)
Q Consensus 753 p~gvsKG~al~~Ll~~l~~~gi~~-d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~--------~s~A~ 823 (856)
..+-.|+.+++.+++++ |+++ +++++|||+.||+.|.+.+|.. .++.++.. ...|+
T Consensus 201 ~~~Kp~~~~~~~~~~~l---gi~~~~~~i~vGD~~~Di~~a~~aG~~------------~~~~~~~~~~~~~~~~~~~ad 265 (282)
T 3nuq_A 201 LVCKPHVKAFEKAMKES---GLARYENAYFIDDSGKNIETGIKLGMK------------TCIHLVENEVNEILGQTPEGA 265 (282)
T ss_dssp CCCTTSHHHHHHHHHHH---TCCCGGGEEEEESCHHHHHHHHHHTCS------------EEEEECSCCC----CCCCTTC
T ss_pred cCCCcCHHHHHHHHHHc---CCCCcccEEEEcCCHHHHHHHHHCCCe------------EEEEEcCCccccccccCCCCC
Confidence 34566999999999999 9998 9999999999999999999974 23444322 34788
Q ss_pred eEcCChhHHHHHHHHH
Q 003025 824 YYLDDAAEVVTMLEAL 839 (856)
Q Consensus 824 y~l~~~~eV~~~L~~L 839 (856)
|++++..++.++|..+
T Consensus 266 ~vi~sl~el~~~l~~l 281 (282)
T 3nuq_A 266 IVISDILELPHVVSDL 281 (282)
T ss_dssp EEESSGGGGGGTSGGG
T ss_pred EEeCCHHHHHHHhhhh
Confidence 9999999888776554
|
| >2ah5_A COG0546: predicted phosphatases; MCSG, structural genomics, hydrola haloacid dehalogenase-like, PSI; 1.74A {Streptococcus pneumoniae} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=98.68 E-value=5e-08 Score=99.04 Aligned_cols=70 Identities=21% Similarity=0.209 Sum_probs=58.1
Q ss_pred eCCCCHHHHHHHHHHHhhhcCCCcceEEEEeCCchhHHHHHHccccccCCCCCCCccEEEEEeCCC------ccccceEc
Q 003025 753 PQGVSKGVVAEKIFTTMAESGRHADFVLCIGDDRSDEDMFEIIGNATSSGVLSSNASVFACTVGQK------PSKAKYYL 826 (856)
Q Consensus 753 p~gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~------~s~A~y~l 826 (856)
+.+-.|..+.+.+++++ |++++++++|||+.||+.|.+.+|.. +++|+.|.. ...|+|++
T Consensus 134 ~~~Kp~p~~~~~~~~~l---g~~p~~~~~vgDs~~Di~~a~~aG~~-----------~i~v~~~~~~~~~l~~~~a~~v~ 199 (210)
T 2ah5_A 134 PEAPHKADVIHQALQTH---QLAPEQAIIIGDTKFDMLGARETGIQ-----------KLAITWGFGEQADLLNYQPDYIA 199 (210)
T ss_dssp SSCCSHHHHHHHHHHHT---TCCGGGEEEEESSHHHHHHHHHHTCE-----------EEEESSSSSCHHHHHTTCCSEEE
T ss_pred CCCCCChHHHHHHHHHc---CCCcccEEEECCCHHHHHHHHHCCCc-----------EEEEcCCCCCHHHHHhCCCCEEE
Confidence 45667999999999999 99999999999999999999999973 356666653 13588999
Q ss_pred CChhHHHHHH
Q 003025 827 DDAAEVVTML 836 (856)
Q Consensus 827 ~~~~eV~~~L 836 (856)
++..++.++|
T Consensus 200 ~~~~el~~~l 209 (210)
T 2ah5_A 200 HKPLEVLAYF 209 (210)
T ss_dssp SSTTHHHHHT
T ss_pred CCHHHHHHHh
Confidence 9998887654
|
| >3umb_A Dehalogenase-like hydrolase; 2.20A {Ralstonia solanacearum} | Back alignment and structure |
|---|
Probab=98.67 E-value=4.4e-08 Score=100.25 Aligned_cols=70 Identities=11% Similarity=0.007 Sum_probs=55.3
Q ss_pred CHHHHHHHHHHHhhhcCCCcceEEEEeCCchhHHHHHHccccccCCCCCCCccEEEEEeC-CC----ccccceEcCChhH
Q 003025 757 SKGVVAEKIFTTMAESGRHADFVLCIGDDRSDEDMFEIIGNATSSGVLSSNASVFACTVG-QK----PSKAKYYLDDAAE 831 (856)
Q Consensus 757 sKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG-~~----~s~A~y~l~~~~e 831 (856)
.|+.+++.+++++ |++++++++|||+.||+.|++.+|.. ++.|..| +. +..|+|++++..+
T Consensus 156 p~~~~~~~~~~~~---~~~~~~~~~vGD~~~Di~~a~~~G~~-----------~~~v~~~~~~~~~~~~~~~~v~~~~~e 221 (233)
T 3umb_A 156 TAPAAYALAPRAF---GVPAAQILFVSSNGWDACGATWHGFT-----------TFWINRLGHPPEALDVAPAAAGHDMRD 221 (233)
T ss_dssp TSHHHHTHHHHHH---TSCGGGEEEEESCHHHHHHHHHHTCE-----------EEEECTTCCCCCSSSCCCSEEESSHHH
T ss_pred cCHHHHHHHHHHh---CCCcccEEEEeCCHHHHHHHHHcCCE-----------EEEEcCCCCCchhccCCCCEEECCHHH
Confidence 3677899999999 99999999999999999999999974 1223332 22 3568999999999
Q ss_pred HHHHHHHHH
Q 003025 832 VVTMLEALA 840 (856)
Q Consensus 832 V~~~L~~L~ 840 (856)
+.++|+...
T Consensus 222 l~~~l~~~~ 230 (233)
T 3umb_A 222 LLQFVQARQ 230 (233)
T ss_dssp HHHHHHC--
T ss_pred HHHHHHHhh
Confidence 999887643
|
| >1qq5_A Protein (L-2-haloacid dehalogenase); hydrolase; 1.52A {Xanthobacter autotrophicus} SCOP: c.108.1.1 PDB: 1qq6_A* 1qq7_A* 1aq6_A | Back alignment and structure |
|---|
Probab=98.65 E-value=1.3e-07 Score=98.87 Aligned_cols=74 Identities=11% Similarity=0.050 Sum_probs=58.2
Q ss_pred CCCHHHHHHHHHHHhhhcCCCcceEEEEeCCchhHHHHHHccccccCCCCCCCccEEEEEe-------------------
Q 003025 755 GVSKGVVAEKIFTTMAESGRHADFVLCIGDDRSDEDMFEIIGNATSSGVLSSNASVFACTV------------------- 815 (856)
Q Consensus 755 gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~v------------------- 815 (856)
+-.|+.+++.+++++ |++++++++|||+.||+.|.+.+|.. ++.+..
T Consensus 146 ~Kp~~~~~~~~~~~~---~~~~~~~~~vGD~~~Di~~a~~aG~~-----------~~~~~~~~~~~~~~~l~~g~~~~~~ 211 (253)
T 1qq5_A 146 FKPHPDSYALVEEVL---GVTPAEVLFVSSNGFDVGGAKNFGFS-----------VARVARLSQEALARELVSGTIAPLT 211 (253)
T ss_dssp CTTSHHHHHHHHHHH---CCCGGGEEEEESCHHHHHHHHHHTCE-----------EEEECCSCHHHHHHHTTSSSCCHHH
T ss_pred CCCCHHHHHHHHHHc---CCCHHHEEEEeCChhhHHHHHHCCCE-----------EEEECCcccchhhhhcccccccccc
Confidence 445788999999999 99999999999999999999999974 223332
Q ss_pred ----CC-----CccccceEcCChhHHHHHHHHHHHh
Q 003025 816 ----GQ-----KPSKAKYYLDDAAEVVTMLEALAEA 842 (856)
Q Consensus 816 ----G~-----~~s~A~y~l~~~~eV~~~L~~L~~~ 842 (856)
|. .+..|+|++++..++.++|..+...
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~el~~~l~~~~~~ 247 (253)
T 1qq5_A 212 MFKALRMREETYAEAPDFVVPALGDLPRLVRGMAGA 247 (253)
T ss_dssp HHHHHHSSCCTTSCCCSEEESSGGGHHHHHHHHC--
T ss_pred cccccccccCCCCCCCCeeeCCHHHHHHHHHHhccc
Confidence 11 1356889999999999999887643
|
| >3skx_A Copper-exporting P-type ATPase B; P1B-ATPase, ATP binding domain, copper(II) transporter, MEMB protein, hydrolase; 1.59A {Archaeoglobus fulgidus} PDB: 3sky_A* | Back alignment and structure |
|---|
Probab=98.64 E-value=3.9e-08 Score=103.93 Aligned_cols=60 Identities=17% Similarity=0.264 Sum_probs=49.9
Q ss_pred CHHHHHHHHHHHhhhcCCCcceEEEEeCCchhHHHHHHccccccCCCCCCCccEEEEEeCCC----ccccceEc--CChh
Q 003025 757 SKGVVAEKIFTTMAESGRHADFVLCIGDDRSDEDMFEIIGNATSSGVLSSNASVFACTVGQK----PSKAKYYL--DDAA 830 (856)
Q Consensus 757 sKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~----~s~A~y~l--~~~~ 830 (856)
+|+.+++.+.+.+ ++++|||+.||++|++.+|. +|++|+. +..|++++ ++.+
T Consensus 194 ~k~~~~k~~~~~~--------~~~~vGD~~nDi~~~~~Ag~--------------~va~~~~~~~~~~~a~~~~~~~~~~ 251 (280)
T 3skx_A 194 EKAEKVKEVQQKY--------VTAMVGDGVNDAPALAQADV--------------GIAIGAGTDVAVETADIVLVRNDPR 251 (280)
T ss_dssp GHHHHHHHHHTTS--------CEEEEECTTTTHHHHHHSSE--------------EEECSCCSSSCCCSSSEECSSCCTH
T ss_pred HHHHHHHHHHhcC--------CEEEEeCCchhHHHHHhCCc--------------eEEecCCcHHHHhhCCEEEeCCCHH
Confidence 6999998887643 68999999999999999984 6888874 45688887 8899
Q ss_pred HHHHHHHH
Q 003025 831 EVVTMLEA 838 (856)
Q Consensus 831 eV~~~L~~ 838 (856)
+|.++|+.
T Consensus 252 ~l~~~l~~ 259 (280)
T 3skx_A 252 DVAAIVEL 259 (280)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 99999874
|
| >3umg_A Haloacid dehalogenase; defluorinase, hydrolase; 2.25A {Rhodococcus jostii} | Back alignment and structure |
|---|
Probab=98.64 E-value=5.4e-09 Score=108.22 Aligned_cols=72 Identities=14% Similarity=0.072 Sum_probs=58.9
Q ss_pred eCCCCHHHHHHHHHHHhhhcCCCcceEEEEeCCchhHHHHHHccccccCCCCCCCccEEEEE----eCC-------Cccc
Q 003025 753 PQGVSKGVVAEKIFTTMAESGRHADFVLCIGDDRSDEDMFEIIGNATSSGVLSSNASVFACT----VGQ-------KPSK 821 (856)
Q Consensus 753 p~gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~----vG~-------~~s~ 821 (856)
+.+-.|+.+++.+++++ |++++++++|||+.||+.|++.+|.. ++.+. .|. ....
T Consensus 166 ~~~kp~~~~~~~~~~~l---gi~~~~~~~iGD~~~Di~~a~~aG~~-----------~~~~~~~~~~g~~~~~~~~~~~~ 231 (254)
T 3umg_A 166 RKYKPDPQAYLRTAQVL---GLHPGEVMLAAAHNGDLEAAHATGLA-----------TAFILRPVEHGPHQTDDLAPTGS 231 (254)
T ss_dssp TCCTTSHHHHHHHHHHT---TCCGGGEEEEESCHHHHHHHHHTTCE-----------EEEECCTTTTCTTCCSCSSCSSC
T ss_pred CCCCCCHHHHHHHHHHc---CCChHHEEEEeCChHhHHHHHHCCCE-----------EEEEecCCcCCCCccccccccCC
Confidence 44566899999999999 99999999999999999999999974 23333 332 2467
Q ss_pred cceEcCChhHHHHHHHH
Q 003025 822 AKYYLDDAAEVVTMLEA 838 (856)
Q Consensus 822 A~y~l~~~~eV~~~L~~ 838 (856)
|+|++++..++.++|..
T Consensus 232 ~d~~~~~~~el~~~l~~ 248 (254)
T 3umg_A 232 WDISATDITDLAAQLRA 248 (254)
T ss_dssp CSEEESSHHHHHHHHHH
T ss_pred CceEECCHHHHHHHhcC
Confidence 88999999999988865
|
| >2hi0_A Putative phosphoglycolate phosphatase; YP_619066.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.51A {Lactobacillus delbrueckii} | Back alignment and structure |
|---|
Probab=98.63 E-value=7.7e-08 Score=99.71 Aligned_cols=71 Identities=15% Similarity=0.119 Sum_probs=58.9
Q ss_pred eCCCCHHHHHHHHHHHhhhcCCCcceEEEEeCCchhHHHHHHccccccCCCCCCCccEEEEEeCCCc------cccceEc
Q 003025 753 PQGVSKGVVAEKIFTTMAESGRHADFVLCIGDDRSDEDMFEIIGNATSSGVLSSNASVFACTVGQKP------SKAKYYL 826 (856)
Q Consensus 753 p~gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~~------s~A~y~l 826 (856)
+.+..|+.++..+++++ |++++++++|||+.||+.|.+.+|.. ++.|+.|... ..|+|++
T Consensus 162 ~~~Kp~p~~~~~~~~~l---~~~~~~~~~vGDs~~Di~~a~~aG~~-----------~v~v~~~~~~~~~~~~~~a~~~~ 227 (240)
T 2hi0_A 162 IRRKPAPDMTSECVKVL---GVPRDKCVYIGDSEIDIQTARNSEMD-----------EIAVNWGFRSVPFLQKHGATVIV 227 (240)
T ss_dssp SCCTTSSHHHHHHHHHH---TCCGGGEEEEESSHHHHHHHHHTTCE-----------EEEESSSSSCHHHHHHTTCCCEE
T ss_pred CCCCCCHHHHHHHHHHc---CCCHHHeEEEcCCHHHHHHHHHCCCe-----------EEEECCCCCchhHHHhcCCCEEE
Confidence 45677999999999999 99999999999999999999999973 3556666421 3688999
Q ss_pred CChhHHHHHHH
Q 003025 827 DDAAEVVTMLE 837 (856)
Q Consensus 827 ~~~~eV~~~L~ 837 (856)
++..++..+|.
T Consensus 228 ~~~~el~~~l~ 238 (240)
T 2hi0_A 228 DTAEKLEEAIL 238 (240)
T ss_dssp CSHHHHHHHHH
T ss_pred CCHHHHHHHhc
Confidence 99998877664
|
| >2oda_A Hypothetical protein pspto_2114; haloacid dehalogenase, phosphonoacetaldehyde hydrolase, protein binding; HET: EPE; 1.90A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=98.62 E-value=1.8e-07 Score=94.64 Aligned_cols=56 Identities=11% Similarity=0.088 Sum_probs=42.0
Q ss_pred CCcEEEEEecCCCCCCCCCC----------CCCCCHHHHHHHHHHHhhCCCeEEEecCCChhhHHHh
Q 003025 589 SKSRAILFDYDGTVMPQTSI----------NKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKW 645 (856)
Q Consensus 589 s~~rlI~~DlDGTLl~~~~~----------~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~ 645 (856)
+.+|+|+||+||||++.... ...+-+.+.++|+.| ++.|+.++|+||++...+.+.
T Consensus 4 ~~~kav~fDlDGTL~d~~~~~~~~~~~~~~~~~~~pg~~e~L~~L-~~~g~~~~i~T~~~~~~~~~~ 69 (196)
T 2oda_A 4 PTFPALLFGLSGCLVDFGAQAATSDTPDDEHAQLTPGAQNALKAL-RDQGMPCAWIDELPEALSTPL 69 (196)
T ss_dssp -CCSCEEEETBTTTBCTTSTTTSCSSCCGGGGSBCTTHHHHHHHH-HHHTCCEEEECCSCHHHHHHH
T ss_pred CcCCEEEEcCCCceEeccccccchhhcccccCCcCcCHHHHHHHH-HHCCCEEEEEcCChHHHHHHh
Confidence 35789999999999983210 014557889999998 777999999999987766443
|
| >3l5k_A Protein GS1, haloacid dehalogenase-like hydrolase domain- containing protein 1A; HDHD1A, haloacid dehalogenase-like hydrolase domain containing 1A; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.62 E-value=4.3e-09 Score=109.59 Aligned_cols=72 Identities=14% Similarity=0.091 Sum_probs=58.5
Q ss_pred eCCCCHHHHHHHHHHHhhhcCCCc--ceEEEEeCCchhHHHHHHccccccCCCCCCCccEEEEEeCCC----ccccceEc
Q 003025 753 PQGVSKGVVAEKIFTTMAESGRHA--DFVLCIGDDRSDEDMFEIIGNATSSGVLSSNASVFACTVGQK----PSKAKYYL 826 (856)
Q Consensus 753 p~gvsKG~al~~Ll~~l~~~gi~~--d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~----~s~A~y~l 826 (856)
..+-.|+.+++.+++++ |+++ +++++|||+.||++|++.+|.. ++.|+.|+. +..|+|++
T Consensus 168 ~~~Kp~~~~~~~~~~~l---gi~~~~~~~i~iGD~~~Di~~a~~aG~~-----------~i~v~~~~~~~~~~~~ad~v~ 233 (250)
T 3l5k_A 168 QHGKPDPDIFLACAKRF---SPPPAMEKCLVFEDAPNGVEAALAAGMQ-----------VVMVPDGNLSRDLTTKATLVL 233 (250)
T ss_dssp CSCTTSTHHHHHHHHTS---SSCCCGGGEEEEESSHHHHHHHHHTTCE-----------EEECCCTTSCGGGSTTSSEEC
T ss_pred cCCCCChHHHHHHHHHc---CCCCCcceEEEEeCCHHHHHHHHHcCCE-----------EEEEcCCCCchhhcccccEee
Confidence 34555788999999999 9988 9999999999999999999973 355666653 47899999
Q ss_pred CChhHHHHHHHH
Q 003025 827 DDAAEVVTMLEA 838 (856)
Q Consensus 827 ~~~~eV~~~L~~ 838 (856)
++.+++...|..
T Consensus 234 ~sl~el~~~l~~ 245 (250)
T 3l5k_A 234 NSLQDFQPELFG 245 (250)
T ss_dssp SCGGGCCGGGGT
T ss_pred cCHHHhhHHHhc
Confidence 999887666544
|
| >1zrn_A L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseudomonas SP} SCOP: c.108.1.1 PDB: 1zrm_A 1jud_A 1qh9_A | Back alignment and structure |
|---|
Probab=98.62 E-value=1.6e-08 Score=103.72 Aligned_cols=73 Identities=14% Similarity=0.073 Sum_probs=55.3
Q ss_pred CCCCHHHHHHHHHHHhhhcCCCcceEEEEeCCchhHHHHHHccccccCCCCCCCccEEEEEeCC-C----ccccceEcCC
Q 003025 754 QGVSKGVVAEKIFTTMAESGRHADFVLCIGDDRSDEDMFEIIGNATSSGVLSSNASVFACTVGQ-K----PSKAKYYLDD 828 (856)
Q Consensus 754 ~gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~-~----~s~A~y~l~~ 828 (856)
.+-.|..+++.+++++ |++++++++|||+.||+.|.+.+|.. ++.+..|. . +..|+|++++
T Consensus 149 ~~Kp~~~~~~~~~~~~---~~~~~~~~~iGD~~~Di~~a~~aG~~-----------~~~~~~~~~~~~~~~~~~~~~~~~ 214 (232)
T 1zrn_A 149 VYKPDNRVYELAEQAL---GLDRSAILFVASNAWDATGARYFGFP-----------TCWINRTGNVFEEMGQTPDWEVTS 214 (232)
T ss_dssp CCTTSHHHHHHHHHHH---TSCGGGEEEEESCHHHHHHHHHHTCC-----------EEEECTTCCCCCSSSCCCSEEESS
T ss_pred CCCCCHHHHHHHHHHc---CCCcccEEEEeCCHHHHHHHHHcCCE-----------EEEEcCCCCCccccCCCCCEEECC
Confidence 3455788999999999 99999999999999999999999974 23333332 1 3568899999
Q ss_pred hhHHHHHHHHHH
Q 003025 829 AAEVVTMLEALA 840 (856)
Q Consensus 829 ~~eV~~~L~~L~ 840 (856)
..++..+|+.+.
T Consensus 215 ~~el~~~l~~~~ 226 (232)
T 1zrn_A 215 LRAVVELFETAA 226 (232)
T ss_dssp HHHHHTTC----
T ss_pred HHHHHHHHHhhc
Confidence 999888776653
|
| >3ddh_A Putative haloacid dehalogenase-like family hydrol; hydrolase, HAD superfamily, ST genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=98.59 E-value=4.3e-08 Score=99.73 Aligned_cols=66 Identities=9% Similarity=0.091 Sum_probs=52.6
Q ss_pred CHHHHHHHHHHHhhhcCCCcceEEEEeCCc-hhHHHHHHccccccCCCCCCCccEEEE----EeCCC-----ccccceEc
Q 003025 757 SKGVVAEKIFTTMAESGRHADFVLCIGDDR-SDEDMFEIIGNATSSGVLSSNASVFAC----TVGQK-----PSKAKYYL 826 (856)
Q Consensus 757 sKG~al~~Ll~~l~~~gi~~d~vlaiGD~~-ND~~Mf~~ag~~~~~~~~~~~~~~~av----~vG~~-----~s~A~y~l 826 (856)
.|+.+++.+++++ |++++++++|||+. ||+.|++.+|.. ++.| +.|+. ...++|++
T Consensus 158 pk~~~~~~~~~~l---gi~~~~~i~iGD~~~~Di~~a~~aG~~-----------~v~v~~~~~~g~~~~~~~~~~~d~v~ 223 (234)
T 3ddh_A 158 KTEKEYLRLLSIL---QIAPSELLMVGNSFKSDIQPVLSLGGY-----------GVHIPFEVMWKHEVTETFAHERLKQV 223 (234)
T ss_dssp CSHHHHHHHHHHH---TCCGGGEEEEESCCCCCCHHHHHHTCE-----------EEECCCCTTCCCC---CCCCTTEEEC
T ss_pred CCHHHHHHHHHHh---CCCcceEEEECCCcHHHhHHHHHCCCe-----------EEEecCCcccccCCcccccCCCceec
Confidence 5999999999999 99999999999996 999999999974 1223 22332 23348889
Q ss_pred CChhHHHHHH
Q 003025 827 DDAAEVVTML 836 (856)
Q Consensus 827 ~~~~eV~~~L 836 (856)
++..++.++|
T Consensus 224 ~~l~el~~~l 233 (234)
T 3ddh_A 224 KRLDDLLSLL 233 (234)
T ss_dssp SSGGGHHHHC
T ss_pred ccHHHHHHhc
Confidence 9999888765
|
| >4hwg_A UDP-N-acetylglucosamine 2-epimerase; ssgcid, structural genomics, seattle structural genomics center for infectious disease, isomerase; 2.00A {Rickettsia bellii} | Back alignment and structure |
|---|
Probab=98.57 E-value=1e-06 Score=98.64 Aligned_cols=243 Identities=10% Similarity=0.021 Sum_probs=144.1
Q ss_pred HHHHHcCCCCCEEEEeCcccchHHHHHHhhcCCCeEEEEEccCCCChHHHhcCCchHHHHHHhH--hCCEEcccCHHHHH
Q 003025 192 RVIEVINPEDDYVWIHDYHLMVLPTFLRRRFTRLRMGFFLHSPFPSSEIYRTLPVREEILKALL--NADLIGFHTFDYAR 269 (856)
Q Consensus 192 ~i~~~~~~~~D~VwihDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~~~~lp~r~eil~~ll--~~dligf~t~~~~~ 269 (856)
++++..+| |+|.+|+.-...++ .+..+..++|++ ..+.+..+.+ .++.+++.+-+. .+|++-..|....+
T Consensus 88 ~~l~~~kP--D~Vlv~gd~~~~~a-alaA~~~~IPv~-h~eaglrs~~----~~~pee~nR~~~~~~a~~~~~~te~~~~ 159 (385)
T 4hwg_A 88 EVLEKEKP--DAVLFYGDTNSCLS-AIAAKRRKIPIF-HMEAGNRCFD----QRVPEEINRKIIDHISDVNITLTEHARR 159 (385)
T ss_dssp HHHHHHCC--SEEEEESCSGGGGG-HHHHHHTTCCEE-EESCCCCCSC----TTSTHHHHHHHHHHHCSEEEESSHHHHH
T ss_pred HHHHhcCC--cEEEEECCchHHHH-HHHHHHhCCCEE-EEeCCCcccc----ccCcHHHHHHHHHhhhceeecCCHHHHH
Confidence 44566788 89999986655556 444445578874 4454443311 134445555543 47888778888888
Q ss_pred HHHHHHHhhhCceecccCceeeEEECCEEEEEEEee-cccCchHHHHHhcCchHHHHHHHHHHHcC---CCeEEEeccCc
Q 003025 270 HFLSCCSRMLGLEYQSKRGYIGLEYYGRTVGIKIMP-VGIHMGQIESVLRLADKDWRVQELKQQFE---GKTVLLGVDDM 345 (856)
Q Consensus 270 ~Fl~~~~r~lg~~~~~~~~~~~~~~~gr~~~i~i~p-~GId~~~~~~~~~~~~~~~~~~~l~~~~~---~k~iil~VdRl 345 (856)
+|.+ .|+.. ++ |.+.+ +++|.-.+... .....++++++. ++.+++..+|.
T Consensus 160 ~l~~-----~G~~~--~~-------------I~vtGnp~~D~~~~~~~------~~~~~~~~~~lgl~~~~~iLvt~hr~ 213 (385)
T 4hwg_A 160 YLIA-----EGLPA--EL-------------TFKSGSHMPEVLDRFMP------KILKSDILDKLSLTPKQYFLISSHRE 213 (385)
T ss_dssp HHHH-----TTCCG--GG-------------EEECCCSHHHHHHHHHH------HHHHCCHHHHTTCCTTSEEEEEECCC
T ss_pred HHHH-----cCCCc--Cc-------------EEEECCchHHHHHHhhh------hcchhHHHHHcCCCcCCEEEEEeCCc
Confidence 8775 35421 11 12222 35553322100 011234455552 45667778875
Q ss_pred c---ccCCHHHHHHHHHHHHHhCCCCcCceEEEEEecCCCCCchhHHHHHHHHHHHHHHH-hcccCCCCcccEEEEcCCC
Q 003025 346 D---IFKGVDLKLLAMEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRI-NETFGRPGYEPVVFIDKPV 421 (856)
Q Consensus 346 d---~~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~~~~lv~~I-N~~~~~~~~~pvv~~~~~v 421 (856)
. ..|++..+++|++++.+++ +++ +|... ++. +++. +++. +. .+ .. +-+.+.+++
T Consensus 214 e~~~~~~~l~~ll~al~~l~~~~-~~~----vv~p~------~p~---~~~~----l~~~~~~-~~--~~-~~v~l~~~l 271 (385)
T 4hwg_A 214 ENVDVKNNLKELLNSLQMLIKEY-NFL----IIFST------HPR---TKKR----LEDLEGF-KE--LG-DKIRFLPAF 271 (385)
T ss_dssp -----CHHHHHHHHHHHHHHHHH-CCE----EEEEE------CHH---HHHH----HHTSGGG-GG--TG-GGEEECCCC
T ss_pred hhcCcHHHHHHHHHHHHHHHhcC-CeE----EEEEC------ChH---HHHH----HHHHHHH-hc--CC-CCEEEEcCC
Confidence 4 4478999999999998765 442 33322 122 2222 2222 10 11 12 234466788
Q ss_pred CHHHHHHHHHhcceeeeccccccCCCcccceeeeecCCCCCCCCCCCCCCCCceEEecCC-ccccccc--CCceeeCCCC
Q 003025 422 TLSERAAYYTIAECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEF-IGCSPSL--SGAIRVNPWN 498 (856)
Q Consensus 422 ~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~g~lV~Se~-~G~~~~l--~~al~VnP~d 498 (856)
+..++..+|+.||+++..| |.+..||++++. |+|+... ++..+.+ +.+++|.+ |
T Consensus 272 g~~~~~~l~~~adlvvt~S-----Ggv~~EA~alG~-----------------Pvv~~~~~ter~e~v~~G~~~lv~~-d 328 (385)
T 4hwg_A 272 SFTDYVKLQMNAFCILSDS-----GTITEEASILNL-----------------PALNIREAHERPEGMDAGTLIMSGF-K 328 (385)
T ss_dssp CHHHHHHHHHHCSEEEECC-----TTHHHHHHHTTC-----------------CEEECSSSCSCTHHHHHTCCEECCS-S
T ss_pred CHHHHHHHHHhCcEEEECC-----ccHHHHHHHcCC-----------------CEEEcCCCccchhhhhcCceEEcCC-C
Confidence 8899999999999999777 446799999965 6666543 3334444 23566654 9
Q ss_pred HHHHHHHHHHHHcCC
Q 003025 499 IEATAEAMHEAIQMN 513 (856)
Q Consensus 499 ~~~~A~ai~~aL~m~ 513 (856)
.+++++++.++|+.+
T Consensus 329 ~~~i~~ai~~ll~d~ 343 (385)
T 4hwg_A 329 AERVLQAVKTITEEH 343 (385)
T ss_dssp HHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHhCh
Confidence 999999999999754
|
| >2hoq_A Putative HAD-hydrolase PH1655; haloacid dehalogenase, structural genomics, NPPSFA, national on protein structural and functional analyses; 1.70A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=98.56 E-value=2.9e-08 Score=102.76 Aligned_cols=75 Identities=16% Similarity=0.194 Sum_probs=60.3
Q ss_pred CCCCHHHHHHHHHHHhhhcCCCcceEEEEeCCc-hhHHHHHHccccccCCCCCCCccEEEEEeCCCc----c---ccceE
Q 003025 754 QGVSKGVVAEKIFTTMAESGRHADFVLCIGDDR-SDEDMFEIIGNATSSGVLSSNASVFACTVGQKP----S---KAKYY 825 (856)
Q Consensus 754 ~gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~-ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~~----s---~A~y~ 825 (856)
.+-.|+.+++.+++++ |++++++++|||+. ||++|.+.+|.. ++.|..|... . .|.++
T Consensus 148 ~~Kp~~~~~~~~~~~~---g~~~~~~i~iGD~~~~Di~~a~~aG~~-----------~~~v~~g~~~~~~~~~~~~~~~~ 213 (241)
T 2hoq_A 148 VKKPHPKIFKKALKAF---NVKPEEALMVGDRLYSDIYGAKRVGMK-----------TVWFRYGKHSERELEYRKYADYE 213 (241)
T ss_dssp CCTTCHHHHHHHHHHH---TCCGGGEEEEESCTTTTHHHHHHTTCE-----------EEEECCSCCCHHHHTTGGGCSEE
T ss_pred CCCCCHHHHHHHHHHc---CCCcccEEEECCCchHhHHHHHHCCCE-----------EEEECCCCCCcccccccCCCCEE
Confidence 4455779999999999 99999999999998 999999999974 3455556421 2 68899
Q ss_pred cCChhHHHHHHHHHHHh
Q 003025 826 LDDAAEVVTMLEALAEA 842 (856)
Q Consensus 826 l~~~~eV~~~L~~L~~~ 842 (856)
+++..++..+|+.+...
T Consensus 214 i~~~~el~~~l~~~~~~ 230 (241)
T 2hoq_A 214 IDNLESLLEVLARESSS 230 (241)
T ss_dssp ESSTTHHHHHHHHCCSC
T ss_pred ECCHHHHHHHHHHHhhc
Confidence 99999999988775433
|
| >2hdo_A Phosphoglycolate phosphatase; NP_784602.1, structur genomics, PSI-2, protein structure initiative, joint center structural genomics; HET: MSE; 1.50A {Lactobacillus plantarum} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=98.54 E-value=5e-08 Score=98.41 Aligned_cols=68 Identities=15% Similarity=0.140 Sum_probs=53.8
Q ss_pred CCCH--HHHHHHHHHHhhhcCCCcceEEEEeCCchhHHHHHHccccccCCCCCCCccEEEEEeCCC--c--cccceEcCC
Q 003025 755 GVSK--GVVAEKIFTTMAESGRHADFVLCIGDDRSDEDMFEIIGNATSSGVLSSNASVFACTVGQK--P--SKAKYYLDD 828 (856)
Q Consensus 755 gvsK--G~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~--~--s~A~y~l~~ 828 (856)
+.+| +.+++.+++++ |++++++++|||+.||++|++.+|.. ++.+..|.. . ..|+|++++
T Consensus 135 ~~~KP~~~~~~~~~~~~---~~~~~~~i~vGD~~~Di~~a~~aG~~-----------~~~~~~~~~~~~~~~~a~~~~~~ 200 (209)
T 2hdo_A 135 PKRKPDPLPLLTALEKV---NVAPQNALFIGDSVSDEQTAQAANVD-----------FGLAVWGMDPNADHQKVAHRFQK 200 (209)
T ss_dssp SCCTTSSHHHHHHHHHT---TCCGGGEEEEESSHHHHHHHHHHTCE-----------EEEEGGGCCTTGGGSCCSEEESS
T ss_pred CCCCCCcHHHHHHHHHc---CCCcccEEEECCChhhHHHHHHcCCe-----------EEEEcCCCCChhhhccCCEEeCC
Confidence 6788 99999999999 99999999999999999999999974 233333432 1 128899988
Q ss_pred hhHHHHHH
Q 003025 829 AAEVVTML 836 (856)
Q Consensus 829 ~~eV~~~L 836 (856)
..++.++|
T Consensus 201 ~~el~~~l 208 (209)
T 2hdo_A 201 PLDILELF 208 (209)
T ss_dssp GGGGGGGC
T ss_pred HHHHHHhh
Confidence 88876554
|
| >3n28_A Phosphoserine phosphatase; HAD family hydrolase, structural genomics, PSI, protein STRU initiative, nysgrc; 2.30A {Vibrio cholerae} | Back alignment and structure |
|---|
Probab=98.51 E-value=3.2e-07 Score=100.55 Aligned_cols=72 Identities=19% Similarity=0.178 Sum_probs=59.0
Q ss_pred CCHHHHHHHHHHHhhhcCCCcceEEEEeCCchhHHHHHHccccccCCCCCCCccEEEEEeCCC---ccccceEc--CChh
Q 003025 756 VSKGVVAEKIFTTMAESGRHADFVLCIGDDRSDEDMFEIIGNATSSGVLSSNASVFACTVGQK---PSKAKYYL--DDAA 830 (856)
Q Consensus 756 vsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~---~s~A~y~l--~~~~ 830 (856)
-.|+.+++.+++++ |++++++++|||+.||++|++.+|. +|++... +..|++++ ++.+
T Consensus 244 kpk~~~~~~~~~~l---gi~~~~~v~vGDs~nDi~~a~~aG~--------------~va~~~~~~~~~~a~~v~~~~~l~ 306 (335)
T 3n28_A 244 QTKADILLTLAQQY---DVEIHNTVAVGDGANDLVMMAAAGL--------------GVAYHAKPKVEAKAQTAVRFAGLG 306 (335)
T ss_dssp HHHHHHHHHHHHHH---TCCGGGEEEEECSGGGHHHHHHSSE--------------EEEESCCHHHHTTSSEEESSSCTH
T ss_pred hhhHHHHHHHHHHc---CCChhhEEEEeCCHHHHHHHHHCCC--------------eEEeCCCHHHHhhCCEEEecCCHH
Confidence 36999999999999 9999999999999999999999996 3444222 46777776 4679
Q ss_pred HHHHHHHHHHHhcC
Q 003025 831 EVVTMLEALAEASA 844 (856)
Q Consensus 831 eV~~~L~~L~~~~~ 844 (856)
+|+.+|+.......
T Consensus 307 ~v~~~L~~~l~~~~ 320 (335)
T 3n28_A 307 GVVCILSAALVAQQ 320 (335)
T ss_dssp HHHHHHHHHHHHTT
T ss_pred HHHHHHHhHHHHhh
Confidence 99999998876543
|
| >3smv_A S-(-)-azetidine-2-carboxylate hydrolase; haloacid dehalogenase superfamily, L-azetidine-2- carboxylate; HET: GOL; 1.38A {Pseudomonas} | Back alignment and structure |
|---|
Probab=98.49 E-value=1.3e-07 Score=96.79 Aligned_cols=66 Identities=9% Similarity=0.067 Sum_probs=50.9
Q ss_pred HHHHHHHHHhhhcCCCcceEEEEeCCc-hhHHHHHHccccccCCCCCCCccEEEEEe-------CC-----CccccceEc
Q 003025 760 VVAEKIFTTMAESGRHADFVLCIGDDR-SDEDMFEIIGNATSSGVLSSNASVFACTV-------GQ-----KPSKAKYYL 826 (856)
Q Consensus 760 ~al~~Ll~~l~~~gi~~d~vlaiGD~~-ND~~Mf~~ag~~~~~~~~~~~~~~~av~v-------G~-----~~s~A~y~l 826 (856)
.+++. ++++ |++++++++|||+. ||+.|.+.+|.. ++.+.- |+ ....|+|++
T Consensus 160 ~~l~~-~~~l---gi~~~~~~~vGD~~~~Di~~a~~aG~~-----------~~~~~~~~~~~g~g~~~~~~~~~~ad~v~ 224 (240)
T 3smv_A 160 YMIDA-LAKA---GIEKKDILHTAESLYHDHIPANDAGLV-----------SAWIYRRHGKEGYGATHVPSRMPNVDFRF 224 (240)
T ss_dssp HHHHH-HHHT---TCCGGGEEEEESCTTTTHHHHHHHTCE-----------EEEECTTCC-------CCCSSCCCCSEEE
T ss_pred HHHHH-HHhc---CCCchhEEEECCCchhhhHHHHHcCCe-----------EEEEcCCCcccCCCCCCCCcCCCCCCEEe
Confidence 45555 7888 99999999999995 999999999974 122211 22 247899999
Q ss_pred CChhHHHHHHHHHH
Q 003025 827 DDAAEVVTMLEALA 840 (856)
Q Consensus 827 ~~~~eV~~~L~~L~ 840 (856)
++..++.++|+.+.
T Consensus 225 ~~~~el~~~l~~~l 238 (240)
T 3smv_A 225 NSMGEMAEAHKQAL 238 (240)
T ss_dssp SSHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHh
Confidence 99999999998865
|
| >3ib6_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.20A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=98.49 E-value=5.3e-07 Score=90.22 Aligned_cols=73 Identities=14% Similarity=0.072 Sum_probs=54.3
Q ss_pred HHHHHHHHHHHhhhcCCCcceEEEEeCC-chhHHHHHHccccccCCCCCCCccEEEEEeCCCc--------cccceEcC-
Q 003025 758 KGVVAEKIFTTMAESGRHADFVLCIGDD-RSDEDMFEIIGNATSSGVLSSNASVFACTVGQKP--------SKAKYYLD- 827 (856)
Q Consensus 758 KG~al~~Ll~~l~~~gi~~d~vlaiGD~-~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~~--------s~A~y~l~- 827 (856)
+....+.+++++ |++++++++|||+ .+|+.+.+.+|.. ++.|..|... ..+.++++
T Consensus 99 ~p~~~~~~~~~~---~~~~~~~l~VGD~~~~Di~~A~~aG~~-----------~i~v~~~~~~~~~~~~~~~~~~~v~~~ 164 (189)
T 3ib6_A 99 DKTIFDFTLNAL---QIDKTEAVMVGNTFESDIIGANRAGIH-----------AIWLQNPEVCLQDERLPLVAPPFVIPV 164 (189)
T ss_dssp SHHHHHHHHHHH---TCCGGGEEEEESBTTTTHHHHHHTTCE-----------EEEECCTTTCBCSSCCCBCSSSCEEEE
T ss_pred CHHHHHHHHHHc---CCCcccEEEECCCcHHHHHHHHHCCCe-----------EEEECCccccccccccccCCCcceecc
Confidence 446678888888 9999999999999 7999999999973 2333333321 27788888
Q ss_pred -ChhHHHHHHHHHHHhcC
Q 003025 828 -DAAEVVTMLEALAEASA 844 (856)
Q Consensus 828 -~~~eV~~~L~~L~~~~~ 844 (856)
+..++.++|+-+-+...
T Consensus 165 ~~l~~l~~~l~l~~~~~~ 182 (189)
T 3ib6_A 165 WDLADVPEALLLLKKISE 182 (189)
T ss_dssp SSGGGHHHHHHHHHHHC-
T ss_pred ccHHhHHHHHHHHHHhhc
Confidence 88888888876654443
|
| >2obb_A Hypothetical protein; structural genomics, PSI-2, PR structure initiative, midwest center for structural genomic unknown function; 2.20A {Bacteroides thetaiotaomicron} SCOP: c.108.1.25 | Back alignment and structure |
|---|
Probab=98.49 E-value=1.4e-07 Score=90.00 Aligned_cols=58 Identities=17% Similarity=0.273 Sum_probs=45.2
Q ss_pred CcEEEEEecCCCCCCCCC-CCCCCCHHHHHHHHHHHhhCCCeEEEecCCC---hhhHHHhhcC
Q 003025 590 KSRAILFDYDGTVMPQTS-INKAPSQAVISIINTLCNDARNTVFVVSGRG---RDCLGKWFSP 648 (856)
Q Consensus 590 ~~rlI~~DlDGTLl~~~~-~~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~---~~~l~~~~~~ 648 (856)
.+|+|++|+||||++... ....+.+.++++|++| ++.|+.|+|+|||+ ...+..|+..
T Consensus 2 ~~k~i~~DlDGTL~~~~~~~i~~~~~~~~~al~~l-~~~G~~iii~TgR~~~~~~~~~~~l~~ 63 (142)
T 2obb_A 2 NAMTIAVDFDGTIVEHRYPRIGEEIPFAVETLKLL-QQEKHRLILWSVREGELLDEAIEWCRA 63 (142)
T ss_dssp CCCEEEECCBTTTBCSCTTSCCCBCTTHHHHHHHH-HHTTCEEEECCSCCHHHHHHHHHHHHT
T ss_pred CCeEEEEECcCCCCCCCCccccccCHHHHHHHHHH-HHCCCEEEEEeCCCcccHHHHHHHHHH
Confidence 368999999999998321 1113457899999997 88999999999998 5667777754
|
| >2hsz_A Novel predicted phosphatase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: UNL; 1.90A {Haemophilus somnus 129PT} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=98.48 E-value=1.1e-08 Score=106.59 Aligned_cols=79 Identities=25% Similarity=0.346 Sum_probs=58.8
Q ss_pred eEEEEcCeEEEEEeCCCCHHHHHHHHHHHhhhcCCCcceEEEEeCCchhHHHHHHccccccCCCCCCCccEEEEEeCCC-
Q 003025 740 AAVKSGQFIVEVKPQGVSKGVVAEKIFTTMAESGRHADFVLCIGDDRSDEDMFEIIGNATSSGVLSSNASVFACTVGQK- 818 (856)
Q Consensus 740 ~~v~~g~~~vEI~p~gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~- 818 (856)
..+..+..+.+.+| |+.+++.+++++ |++++++++|||+.||++|++.+|.. ++.|..|..
T Consensus 158 ~~~~~~~~~~~~Kp----~~~~~~~~~~~~---~~~~~~~~~vGD~~~Di~~a~~aG~~-----------~i~v~~g~~~ 219 (243)
T 2hsz_A 158 SEMLGGQSLPEIKP----HPAPFYYLCGKF---GLYPKQILFVGDSQNDIFAAHSAGCA-----------VVGLTYGYNY 219 (243)
T ss_dssp SEEECTTTSSSCTT----SSHHHHHHHHHH---TCCGGGEEEEESSHHHHHHHHHHTCE-----------EEEESSSCST
T ss_pred EEEEecccCCCCCc----CHHHHHHHHHHh---CcChhhEEEEcCCHHHHHHHHHCCCe-----------EEEEcCCCCc
Confidence 34444544434444 688999999999 99999999999999999999999973 345555521
Q ss_pred -----ccccceEcCChhHHHHHH
Q 003025 819 -----PSKAKYYLDDAAEVVTML 836 (856)
Q Consensus 819 -----~s~A~y~l~~~~eV~~~L 836 (856)
...|++++++..++.++|
T Consensus 220 ~~~~~~~~ad~vi~~~~el~~~l 242 (243)
T 2hsz_A 220 NIPIAQSKPDWIFDDFADILKIT 242 (243)
T ss_dssp TCCGGGGCCSEEESSGGGGGGGT
T ss_pred hhhhhhCCCCEEECCHHHHHHHh
Confidence 356888898888776544
|
| >2nyv_A Pgpase, PGP, phosphoglycolate phosphatase; structural genomics, PSI-2, protein structure initiative; 2.10A {Aquifex aeolicus} PDB: 2yy6_A | Back alignment and structure |
|---|
Probab=98.47 E-value=3.6e-08 Score=101.02 Aligned_cols=71 Identities=14% Similarity=0.213 Sum_probs=58.1
Q ss_pred CCHHHHHHHHHHHhhhcCCCcceEEEEeCCchhHHHHHHccccccCCCCCCCccEEEEEeCCCc---cccceEcCChhHH
Q 003025 756 VSKGVVAEKIFTTMAESGRHADFVLCIGDDRSDEDMFEIIGNATSSGVLSSNASVFACTVGQKP---SKAKYYLDDAAEV 832 (856)
Q Consensus 756 vsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~~---s~A~y~l~~~~eV 832 (856)
-.|+.+++.+++++ |++++++++|||+.||+.|++.+|.. +++|..|..+ ..|++++++..++
T Consensus 139 Kp~~~~~~~~~~~~---~~~~~~~~~vGD~~~Di~~a~~aG~~-----------~i~v~~g~~~~~~~~~~~~~~~~~el 204 (222)
T 2nyv_A 139 KPSPTPVLKTLEIL---GEEPEKALIVGDTDADIEAGKRAGTK-----------TALALWGYVKLNSQIPDFTLSRPSDL 204 (222)
T ss_dssp CCTTHHHHHHHHHH---TCCGGGEEEEESSHHHHHHHHHHTCE-----------EEEETTSSCSCCCCCCSEEESSTTHH
T ss_pred CCChHHHHHHHHHh---CCCchhEEEECCCHHHHHHHHHCCCe-----------EEEEcCCCCCccccCCCEEECCHHHH
Confidence 36899999999999 99999999999999999999999973 2445555422 5688999999999
Q ss_pred HHHHHHHH
Q 003025 833 VTMLEALA 840 (856)
Q Consensus 833 ~~~L~~L~ 840 (856)
.++|..+.
T Consensus 205 ~~~l~~~~ 212 (222)
T 2nyv_A 205 VKLMDNHI 212 (222)
T ss_dssp HHHHHTTS
T ss_pred HHHHHHhh
Confidence 88876543
|
| >3rhz_A GTF3, nucleotide sugar synthetase-like protein; glycosyltransferase, transferase; HET: UDP; 1.90A {Streptococcus parasanguinis} PDB: 3qkw_A* | Back alignment and structure |
|---|
Probab=98.46 E-value=4.2e-07 Score=99.83 Aligned_cols=245 Identities=11% Similarity=0.036 Sum_probs=145.4
Q ss_pred HHHHHcCCCCCEEEEeCcccc--hHHH-HHHhh-cCCCeEEEEEccCCCChHHHhcCCch-HHHHHHhHhCCEEcccCHH
Q 003025 192 RVIEVINPEDDYVWIHDYHLM--VLPT-FLRRR-FTRLRMGFFLHSPFPSSEIYRTLPVR-EEILKALLNADLIGFHTFD 266 (856)
Q Consensus 192 ~i~~~~~~~~D~VwihDyhl~--llp~-~lr~~-~~~~~i~~flH~PfP~~e~~~~lp~r-~eil~~ll~~dligf~t~~ 266 (856)
.++..+++ +|+|.+|-..+. ..+. ++++. ..++|+.++.|--||-.-. .-+.. ..-...+-.||.|..++..
T Consensus 67 ~~~~~~~~-~DvIi~q~P~~~~~~~~~~~~~~lk~~~~k~i~~ihDl~pl~~~--~~~~~~~~E~~~y~~aD~Ii~~S~~ 143 (339)
T 3rhz_A 67 GIVAGLRH-GDVVIFQTPTWNTTEFDEKLMNKLKLYDIKIVLFIHDVVPLMFS--GNFYLMDRTIAYYNKADVVVAPSQK 143 (339)
T ss_dssp HHTTTCCT-TCEEEEEECCSSCHHHHHHHHHHHTTSSCEEEEEESCCHHHHCG--GGGGGHHHHHHHHTTCSEEEESCHH
T ss_pred HHHhcCCC-CCEEEEeCCCcchhhHHHHHHHHHHhcCCEEEEEecccHHhhCc--cchhhHHHHHHHHHHCCEEEECCHH
Confidence 35555665 499999855542 2222 33331 2389999999987763210 00111 1112234578999999987
Q ss_pred HHHHHHHHHHhhhCceecccCceeeEEECCEEEEEEEeeccc-CchHHHHHhcCchHHHHHHHHHHHcCCCeEEEeccCc
Q 003025 267 YARHFLSCCSRMLGLEYQSKRGYIGLEYYGRTVGIKIMPVGI-HMGQIESVLRLADKDWRVQELKQQFEGKTVLLGVDDM 345 (856)
Q Consensus 267 ~~~~Fl~~~~r~lg~~~~~~~~~~~~~~~gr~~~i~i~p~GI-d~~~~~~~~~~~~~~~~~~~l~~~~~~k~iil~VdRl 345 (856)
..+.+.+ .|+.. .++ .+.++ |... ..+. ....++++|+++||+
T Consensus 144 ~~~~l~~-----~G~~~---------------~ki--~~~~~~~~~~-----~~~~---------~~~~~~~~i~yaG~l 187 (339)
T 3rhz_A 144 MIDKLRD-----FGMNV---------------SKT--VVQGMWDHPT-----QAPM---------FPAGLKREIHFPGNP 187 (339)
T ss_dssp HHHHHHH-----TTCCC---------------SEE--EECCSCCCCC-----CCCC---------CCCEEEEEEEECSCT
T ss_pred HHHHHHH-----cCCCc---------------Cce--eecCCCCccC-----cccc---------cccCCCcEEEEeCCc
Confidence 6665544 13321 111 22332 2110 0000 011346789999999
Q ss_pred cccCCHHHHHHHHHHHHHhCCCCcCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCcccEEEEcCCCCHHH
Q 003025 346 DIFKGVDLKLLAMEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDKPVTLSE 425 (856)
Q Consensus 346 d~~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~~~~lv~~IN~~~~~~~~~pvv~~~~~v~~~e 425 (856)
....++. + + .|+++ |+.+|... +. + .. .|. +.|.+|.+|
T Consensus 188 ~k~~~L~----~---l---~~~~~----f~ivG~G~-----~~----------------~---l~--nV~-f~G~~~~~e 226 (339)
T 3rhz_A 188 ERFSFVK----E---W---KYDIP----LKVYTWQN-----VE----------------L---PQ--NVH-KINYRPDEQ 226 (339)
T ss_dssp TTCGGGG----G---C---CCSSC----EEEEESCC-----CC----------------C---CT--TEE-EEECCCHHH
T ss_pred chhhHHH----h---C---CCCCe----EEEEeCCc-----cc----------------C---cC--CEE-EeCCCCHHH
Confidence 9533221 1 1 35554 88888543 21 0 11 344 567999999
Q ss_pred HHHHHHhcceeeecccccc---------CCCcccceeeeecCCCCCCCCCCCCCCCCceEEecCCcccccccC---Ccee
Q 003025 426 RAAYYTIAECVVVTAVRDG---------MNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIGCSPSLS---GAIR 493 (856)
Q Consensus 426 l~aly~~ADv~vvtS~~EG---------~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~al~ 493 (856)
+.++|+.||+.++. .++ ++....|||||+. |+|++..++..+.+. .|+.
T Consensus 227 l~~~l~~~~~~lv~--~~~~~~~y~~~~~P~Kl~eymA~G~-----------------PVI~~~~~~~~~~v~~~~~G~~ 287 (339)
T 3rhz_A 227 LLMEMSQGGFGLVW--MDDKDKEYQSLYCSYKLGSFLAAGI-----------------PVIVQEGIANQELIENNGLGWI 287 (339)
T ss_dssp HHHHHHTEEEEECC--CCGGGHHHHTTCCCHHHHHHHHHTC-----------------CEEEETTCTTTHHHHHHTCEEE
T ss_pred HHHHHHhCCEEEEE--CCCchhHHHHhcChHHHHHHHHcCC-----------------CEEEccChhHHHHHHhCCeEEE
Confidence 99999999998887 233 4667899999954 999999988888773 3788
Q ss_pred eCCCCHHHHHHHHHHHHcCCHHHHHHHHHHHhhhhhcCCHHHHHHHH
Q 003025 494 VNPWNIEATAEAMHEAIQMNEAEKQLRHEKHYRYVSTHDVAYWARSF 540 (856)
Q Consensus 494 VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~~ 540 (856)
++ +.++++++|.. +.+++++.+.++.+++.......+..++-
T Consensus 288 ~~--~~~e~~~~i~~---l~~~~~~~m~~na~~~a~~~~~~~f~k~~ 329 (339)
T 3rhz_A 288 VK--DVEEAIMKVKN---VNEDEYIELVKNVRSFNPILRKGFFTRRL 329 (339)
T ss_dssp ES--SHHHHHHHHHH---CCHHHHHHHHHHHHHHTHHHHTTHHHHHH
T ss_pred eC--CHHHHHHHHHH---hCHHHHHHHHHHHHHHHHHhhccHHHHHH
Confidence 76 58888888875 45667766666666665443333344433
|
| >2w43_A Hypothetical 2-haloalkanoic acid dehalogenase; hydrolase, metabolic process; HET: MES; 1.66A {Sulfolobus tokodaii} PDB: 2w11_A | Back alignment and structure |
|---|
Probab=98.45 E-value=9.8e-08 Score=95.81 Aligned_cols=66 Identities=12% Similarity=0.058 Sum_probs=53.0
Q ss_pred HHHHHHHHHHHhhhcCCCcceEEEEeCCchhHHHHHHccccccCCCCCCCccEEEEEeCC-C----ccccceEcCChhHH
Q 003025 758 KGVVAEKIFTTMAESGRHADFVLCIGDDRSDEDMFEIIGNATSSGVLSSNASVFACTVGQ-K----PSKAKYYLDDAAEV 832 (856)
Q Consensus 758 KG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~-~----~s~A~y~l~~~~eV 832 (856)
|+.+++.+++++ | ++++++|||+.||+.|.+.+|.. ++.|..|. . ...|.+++++..++
T Consensus 130 ~~~~~~~~~~~~---~--~~~~~~vGD~~~Di~~a~~aG~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~el 193 (201)
T 2w43_A 130 SPKVYKYFLDSI---G--AKEAFLVSSNAFDVIGAKNAGMR-----------SIFVNRKNTIVDPIGGKPDVIVNDFKEL 193 (201)
T ss_dssp CHHHHHHHHHHH---T--CSCCEEEESCHHHHHHHHHTTCE-----------EEEECSSSCCCCTTSCCCSEEESSHHHH
T ss_pred CHHHHHHHHHhc---C--CCcEEEEeCCHHHhHHHHHCCCE-----------EEEECCCCCCccccCCCCCEEECCHHHH
Confidence 599999999999 7 89999999999999999999973 23344432 1 24688999999999
Q ss_pred HHHHHHH
Q 003025 833 VTMLEAL 839 (856)
Q Consensus 833 ~~~L~~L 839 (856)
.++|..+
T Consensus 194 ~~~l~~~ 200 (201)
T 2w43_A 194 YEWILRY 200 (201)
T ss_dssp HHHHHHH
T ss_pred HHHHHhc
Confidence 8888764
|
| >3qnm_A Haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 1.70A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.42 E-value=2.7e-07 Score=94.42 Aligned_cols=72 Identities=17% Similarity=0.134 Sum_probs=57.4
Q ss_pred eCCCCHHHHHHHHHHHhhhcCCCcceEEEEeCCc-hhHHHHHHccccccCCCCCCCccEEEEEeCC---CccccceEcCC
Q 003025 753 PQGVSKGVVAEKIFTTMAESGRHADFVLCIGDDR-SDEDMFEIIGNATSSGVLSSNASVFACTVGQ---KPSKAKYYLDD 828 (856)
Q Consensus 753 p~gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~-ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~---~~s~A~y~l~~ 828 (856)
+.+..|+.+++.+++++ |++++++++|||+. ||++|++.+|.. ++.+.-|. .+..|+|++++
T Consensus 159 ~~~kp~~~~~~~~~~~l---gi~~~~~~~iGD~~~~Di~~a~~aG~~-----------~~~~~~~~~~~~~~~~d~vi~s 224 (240)
T 3qnm_A 159 GVLKPRPEIFHFALSAT---QSELRESLMIGDSWEADITGAHGVGMH-----------QAFYNVTERTVFPFQPTYHIHS 224 (240)
T ss_dssp TCCTTSHHHHHHHHHHT---TCCGGGEEEEESCTTTTHHHHHHTTCE-----------EEEECCSCCCCCSSCCSEEESS
T ss_pred CCCCCCHHHHHHHHHHc---CCCcccEEEECCCchHhHHHHHHcCCe-----------EEEEcCCCCCCcCCCCceEECC
Confidence 45667899999999999 99999999999995 999999999974 22333332 24679999999
Q ss_pred hhHHHHHHHH
Q 003025 829 AAEVVTMLEA 838 (856)
Q Consensus 829 ~~eV~~~L~~ 838 (856)
..|+.++++.
T Consensus 225 l~e~~~~~~~ 234 (240)
T 3qnm_A 225 LKELMNLLEG 234 (240)
T ss_dssp THHHHHHTC-
T ss_pred HHHHHHHHhc
Confidence 9998887654
|
| >4gib_A Beta-phosphoglucomutase; rossmann fold, HAD-like, structural genomics, center for structural genomics of infectious DISE csgid, isomerase; 2.27A {Clostridium difficile} | Back alignment and structure |
|---|
Probab=98.42 E-value=3.6e-07 Score=95.54 Aligned_cols=86 Identities=13% Similarity=0.133 Sum_probs=62.9
Q ss_pred hcCCCeEEEEcCeEEEEEeCCCCHHHHHHHHHHHhhhcCCCcceEEEEeCCchhHHHHHHccccccCCCCCCCccEEEEE
Q 003025 735 LANEPAAVKSGQFIVEVKPQGVSKGVVAEKIFTTMAESGRHADFVLCIGDDRSDEDMFEIIGNATSSGVLSSNASVFACT 814 (856)
Q Consensus 735 l~~~~~~v~~g~~~vEI~p~gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~ 814 (856)
+.++...+..+...-.-+| +......+++++ |++|+++++|||+.+|+.+-+.+|. .+|.
T Consensus 153 l~~~Fd~i~~~~~~~~~KP----~p~~~~~a~~~l---g~~p~e~l~VGDs~~Di~aA~~aG~-------------~~i~ 212 (250)
T 4gib_A 153 ISDKFDFIADAGKCKNNKP----HPEIFLMSAKGL---NVNPQNCIGIEDASAGIDAINSANM-------------FSVG 212 (250)
T ss_dssp CGGGCSEECCGGGCCSCTT----SSHHHHHHHHHH---TCCGGGEEEEESSHHHHHHHHHTTC-------------EEEE
T ss_pred cccccceeecccccCCCCC----cHHHHHHHHHHh---CCChHHeEEECCCHHHHHHHHHcCC-------------EEEE
Confidence 3344444444443322233 457888899999 9999999999999999999999996 3667
Q ss_pred eCCC--ccccceEcCChhHH-HHHHHHHH
Q 003025 815 VGQK--PSKAKYYLDDAAEV-VTMLEALA 840 (856)
Q Consensus 815 vG~~--~s~A~y~l~~~~eV-~~~L~~L~ 840 (856)
|++. ...|+|++++..++ .+.|+++.
T Consensus 213 v~~~~~~~~ad~vi~~l~eL~~~~i~~~~ 241 (250)
T 4gib_A 213 VGNYENLKKANLVVDSTNQLKFEYIQEKY 241 (250)
T ss_dssp ESCTTTTTTSSEEESSGGGCCHHHHHHHH
T ss_pred ECChhHhccCCEEECChHhCCHHHHHHHH
Confidence 7764 46799999998887 56666554
|
| >3fvv_A Uncharacterized protein; unknown function, structural genomics, PSI,MCSG, protein STR initiative, midwest center for structural genomics; 2.10A {Bordetella pertussis} | Back alignment and structure |
|---|
Probab=98.42 E-value=2.1e-06 Score=87.96 Aligned_cols=40 Identities=18% Similarity=0.159 Sum_probs=35.7
Q ss_pred CCCHHHHHHHHHHHhhhcC---CCcceEEEEeCCchhHHHHHHccc
Q 003025 755 GVSKGVVAEKIFTTMAESG---RHADFVLCIGDDRSDEDMFEIIGN 797 (856)
Q Consensus 755 gvsKG~al~~Ll~~l~~~g---i~~d~vlaiGD~~ND~~Mf~~ag~ 797 (856)
+..|...++.+++.+ | ++++++++|||+.||++|++.+|.
T Consensus 157 ~~~K~~~~~~~~~~~---~~~~~~~~~~~~vGDs~~D~~~~~~ag~ 199 (232)
T 3fvv_A 157 REGKVVRVNQWLAGM---GLALGDFAESYFYSDSVNDVPLLEAVTR 199 (232)
T ss_dssp THHHHHHHHHHHHHT---TCCGGGSSEEEEEECCGGGHHHHHHSSE
T ss_pred chHHHHHHHHHHHHc---CCCcCchhheEEEeCCHhhHHHHHhCCC
Confidence 345888888899888 8 899999999999999999999985
|
| >3k1z_A Haloacid dehalogenase-like hydrolase domain-conta protein 3; HDHD3, haloacid dehalogenase-like hydrolase domain containin structural genomics; 1.55A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.40 E-value=1.5e-07 Score=99.11 Aligned_cols=77 Identities=13% Similarity=0.098 Sum_probs=60.7
Q ss_pred CCCHHHHHHHHHHHhhhcCCCcceEEEEeCCc-hhHHHHHHccccccCCCCCCCccEEEEEeCCCc-------cccceEc
Q 003025 755 GVSKGVVAEKIFTTMAESGRHADFVLCIGDDR-SDEDMFEIIGNATSSGVLSSNASVFACTVGQKP-------SKAKYYL 826 (856)
Q Consensus 755 gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~-ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~~-------s~A~y~l 826 (856)
+-.|..+++.+++++ |++++++++|||+. ||+.|.+.+|.. ++.+..|... ..|.|++
T Consensus 160 ~Kp~~~~~~~~~~~~---g~~~~~~~~vGD~~~~Di~~a~~aG~~-----------~i~~~~~~~~~~~~~~~~~ad~v~ 225 (263)
T 3k1z_A 160 PKPDPRIFQEALRLA---HMEPVVAAHVGDNYLCDYQGPRAVGMH-----------SFLVVGPQALDPVVRDSVPKEHIL 225 (263)
T ss_dssp CTTSHHHHHHHHHHH---TCCGGGEEEEESCHHHHTHHHHTTTCE-----------EEEECCSSCCCHHHHHHSCGGGEE
T ss_pred CCCCHHHHHHHHHHc---CCCHHHEEEECCCcHHHHHHHHHCCCE-----------EEEEcCCCCCchhhcccCCCceEe
Confidence 444788899999999 99999999999996 999999999974 2334444322 2689999
Q ss_pred CChhHHHHHHHHHHHhcCC
Q 003025 827 DDAAEVVTMLEALAEASAP 845 (856)
Q Consensus 827 ~~~~eV~~~L~~L~~~~~~ 845 (856)
++..++.++|+.+...+..
T Consensus 226 ~~l~el~~~l~~~~~~~~~ 244 (263)
T 3k1z_A 226 PSLAHLLPALDCLEGSAEN 244 (263)
T ss_dssp SSGGGHHHHHHHHHHC---
T ss_pred CCHHHHHHHHHHHHhcCCC
Confidence 9999999999999865544
|
| >2pr7_A Haloacid dehalogenase/epoxide hydrolase family; NP_599989.1, uncharacterized protein, structural genomics; 1.44A {Corynebacterium glutamicum atcc 13032} | Back alignment and structure |
|---|
Probab=98.38 E-value=3.2e-07 Score=85.70 Aligned_cols=51 Identities=10% Similarity=0.128 Sum_probs=42.7
Q ss_pred cEEEEEecCCCCCCCCCCCCCCCHHHHHHHHHHHhhCCCeEEEecCCChhhHHHhh
Q 003025 591 SRAILFDYDGTVMPQTSINKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWF 646 (856)
Q Consensus 591 ~rlI~~DlDGTLl~~~~~~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~ 646 (856)
+|+|++|+||||.+ ...+.+.+.++|++| ++.|++++|+|+++...+...+
T Consensus 2 ~k~i~~D~DgtL~~----~~~~~~~~~~~l~~L-~~~G~~~~i~S~~~~~~~~~~l 52 (137)
T 2pr7_A 2 MRGLIVDYAGVLDG----TDEDQRRWRNLLAAA-KKNGVGTVILSNDPGGLGAAPI 52 (137)
T ss_dssp CCEEEECSTTTTSS----CHHHHHHHHHHHHHH-HHTTCEEEEEECSCCGGGGHHH
T ss_pred CcEEEEeccceecC----CCccCccHHHHHHHH-HHCCCEEEEEeCCCHHHHHHHH
Confidence 58999999999954 445678899999997 7789999999999887766655
|
| >3a1c_A Probable copper-exporting P-type ATPase A; ATP-binding, cell membrane, copper transport, hydrolase, ION transport, magnesium, membrane; HET: ACP; 1.85A {Archaeoglobus fulgidus} PDB: 3a1d_A* 3a1e_A* 2b8e_A 2voy_J 2voy_I | Back alignment and structure |
|---|
Probab=98.36 E-value=7.5e-07 Score=95.36 Aligned_cols=142 Identities=16% Similarity=0.220 Sum_probs=101.7
Q ss_pred HHHHHHHHHcCCcEEEEEecCCCCCCCCCCCCCCCHHHHHHHHHHHhhCCCeEEEecCCChhhHHHhhcCCCCccEEeeC
Q 003025 579 IDAIVSAYLRSKSRAILFDYDGTVMPQTSINKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSPCKKLGIAAEH 658 (856)
Q Consensus 579 ~~~i~~~y~~s~~rlI~~DlDGTLl~~~~~~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~~~~lgliaen 658 (856)
.+.+...|.....+++++|+|+++...-.....+.+.+.++|+.| ++.|++++|+||++...+...+.. +++.
T Consensus 131 ~~~~~~~~~~~g~~~i~~~~d~~~~~~~~~~~~~~~g~~~~l~~L-~~~g~~~~i~T~~~~~~~~~~l~~---~gl~--- 203 (287)
T 3a1c_A 131 VELALEKLEREAKTAVIVARNGRVEGIIAVSDTLKESAKPAVQEL-KRMGIKVGMITGDNWRSAEAISRE---LNLD--- 203 (287)
T ss_dssp HHHHHHHHHHTTCEEEEEEETTEEEEEEEEECCBCTTHHHHHHHH-HHTTCEEEEECSSCHHHHHHHHHH---HTCS---
T ss_pred HHHHHHHHHhCCCeEEEEEECCEEEEEEEeccccchhHHHHHHHH-HHCCCeEEEEeCCCHHHHHHHHHH---hCCc---
Confidence 345566777777899999999998742112345778899999997 778999999999999988887743 2220
Q ss_pred CEEEEeCCCcceEecCCCCcccHHHHHHHHHHHHhhcCCcceEEecccceEEeeecCCCCCCchhHHHHHHHHHHHhcCC
Q 003025 659 GYFMRWSADEEWQNCGQSVDFGWIQIAEPVMKLYTESTDGSYIEIKESALVWHHRDADPGFGSSQAKELLDHLESVLANE 738 (856)
Q Consensus 659 G~~I~~~~~~~w~~~~~~~~~~w~~~v~~i~~~~~~~~~Gs~ie~k~~~l~~~~~~~dp~~~~~~a~el~~~L~~~l~~~ 738 (856)
. .+..
T Consensus 204 ----------------------------------------~-----------~f~~------------------------ 208 (287)
T 3a1c_A 204 ----------------------------------------L-----------VIAE------------------------ 208 (287)
T ss_dssp ----------------------------------------E-----------EECS------------------------
T ss_pred ----------------------------------------e-----------eeee------------------------
Confidence 0 0000
Q ss_pred CeEEEEcCeEEEEEeCCCCHHHHHHHHHHHhhhcCCCcceEEEEeCCchhHHHHHHccccccCCCCCCCccEEEEEeCCC
Q 003025 739 PAAVKSGQFIVEVKPQGVSKGVVAEKIFTTMAESGRHADFVLCIGDDRSDEDMFEIIGNATSSGVLSSNASVFACTVGQK 818 (856)
Q Consensus 739 ~~~v~~g~~~vEI~p~gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~ 818 (856)
+.| .+|..+++. + +.. +++++|||+.||++|++.+|. +|++|+.
T Consensus 209 ------------i~~--~~K~~~~~~----l---~~~-~~~~~vGDs~~Di~~a~~ag~--------------~v~~~~~ 252 (287)
T 3a1c_A 209 ------------VLP--HQKSEEVKK----L---QAK-EVVAFVGDGINDAPALAQADL--------------GIAVGSG 252 (287)
T ss_dssp ------------CCT--TCHHHHHHH----H---TTT-CCEEEEECTTTCHHHHHHSSE--------------EEEECCC
T ss_pred ------------cCh--HHHHHHHHH----H---hcC-CeEEEEECCHHHHHHHHHCCe--------------eEEeCCC
Confidence 002 257555554 4 667 999999999999999999985 4666653
Q ss_pred ----ccccceEc--CChhHHHHHHHH
Q 003025 819 ----PSKAKYYL--DDAAEVVTMLEA 838 (856)
Q Consensus 819 ----~s~A~y~l--~~~~eV~~~L~~ 838 (856)
...|++++ ++..++.++|+.
T Consensus 253 ~~~~~~~ad~v~~~~~~~~l~~~l~~ 278 (287)
T 3a1c_A 253 SDVAVESGDIVLIRDDLRDVVAAIQL 278 (287)
T ss_dssp SCCSSCCSSEEESSSCTHHHHHHHHT
T ss_pred CHHHHhhCCEEEeCCCHHHHHHHHHH
Confidence 35688999 888988887653
|
| >4eze_A Haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 2.27A {Salmonella enterica subsp} | Back alignment and structure |
|---|
Probab=98.31 E-value=5.8e-07 Score=97.88 Aligned_cols=64 Identities=16% Similarity=0.213 Sum_probs=50.0
Q ss_pred CHHHHHHHHHHHhhhcCCCcceEEEEeCCchhHHHHHHccccccCCCCCCCccEEEEEeCCC---ccccceEcC--ChhH
Q 003025 757 SKGVVAEKIFTTMAESGRHADFVLCIGDDRSDEDMFEIIGNATSSGVLSSNASVFACTVGQK---PSKAKYYLD--DAAE 831 (856)
Q Consensus 757 sKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~---~s~A~y~l~--~~~e 831 (856)
.|..+++.+++++ |++++++++|||+.||++|++.+|. +|.++.. ...|++.+. +..+
T Consensus 246 pkp~~~~~~~~~l---gv~~~~~i~VGDs~~Di~aa~~AG~--------------~va~~~~~~~~~~a~~~i~~~~L~~ 308 (317)
T 4eze_A 246 NKKQTLVDLAARL---NIATENIIACGDGANDLPMLEHAGT--------------GIAWKAKPVVREKIHHQINYHGFEL 308 (317)
T ss_dssp HHHHHHHHHHHHH---TCCGGGEEEEECSGGGHHHHHHSSE--------------EEEESCCHHHHHHCCEEESSSCGGG
T ss_pred CCHHHHHHHHHHc---CCCcceEEEEeCCHHHHHHHHHCCC--------------eEEeCCCHHHHHhcCeeeCCCCHHH
Confidence 3888999999999 9999999999999999999999995 4555543 345666653 5666
Q ss_pred HHHHHH
Q 003025 832 VVTMLE 837 (856)
Q Consensus 832 V~~~L~ 837 (856)
++.+|+
T Consensus 309 ll~~L~ 314 (317)
T 4eze_A 309 LLFLIE 314 (317)
T ss_dssp GGGGTC
T ss_pred HHHHHH
Confidence 665543
|
| >3j08_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} | Back alignment and structure |
|---|
Probab=98.29 E-value=6e-07 Score=106.98 Aligned_cols=139 Identities=18% Similarity=0.233 Sum_probs=103.4
Q ss_pred HHHHHHcCCcEEEEEecCCCCCCCCCCCCCCCHHHHHHHHHHHhhCCCeEEEecCCChhhHHHhhcCCCCccEEeeCCEE
Q 003025 582 IVSAYLRSKSRAILFDYDGTVMPQTSINKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSPCKKLGIAAEHGYF 661 (856)
Q Consensus 582 i~~~y~~s~~rlI~~DlDGTLl~~~~~~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~~~~lgliaenG~~ 661 (856)
..+.+.....+.+++.+||+++..-....++.+++.++|++| ++.|++++++||++...+...... +++.
T Consensus 428 ~~~~~~~~g~~~l~va~~~~~~G~i~~~D~l~~~~~~~i~~L-~~~Gi~v~~~TGd~~~~a~~ia~~---lgi~------ 497 (645)
T 3j08_A 428 ALEKLEREAKTAVIVARNGRVEGIIAVSDTLKESAKPAVQEL-KRMGIKVGMITGDNWRSAEAISRE---LNLD------ 497 (645)
T ss_dssp HHHHHHTTTCCCEEEEETTEEEEEEEEECCCTTTHHHHHHHH-HHTTCEEEEECSSCHHHHHHHHHH---HTCS------
T ss_pred HHHHHHhcCCeEEEEEECCEEEEEEEecCCchhHHHHHHHHH-HHCCCEEEEEeCCCHHHHHHHHHH---cCCC------
Confidence 344555667788999999998742223456788999999997 888999999999999998888743 2220
Q ss_pred EEeCCCcceEecCCCCcccHHHHHHHHHHHHhhcCCcceEEecccceEEeeecCCCCCCchhHHHHHHHHHHHhcCCCeE
Q 003025 662 MRWSADEEWQNCGQSVDFGWIQIAEPVMKLYTESTDGSYIEIKESALVWHHRDADPGFGSSQAKELLDHLESVLANEPAA 741 (856)
Q Consensus 662 I~~~~~~~w~~~~~~~~~~w~~~v~~i~~~~~~~~~Gs~ie~k~~~l~~~~~~~dp~~~~~~a~el~~~L~~~l~~~~~~ 741 (856)
T Consensus 498 -------------------------------------------------------------------------------- 497 (645)
T 3j08_A 498 -------------------------------------------------------------------------------- 497 (645)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred EEEcCeEEEEEeCCCCHHHHHHHHHHHhhhcCCCcceEEEEeCCchhHHHHHHccccccCCCCCCCccEEEEEeCCC---
Q 003025 742 VKSGQFIVEVKPQGVSKGVVAEKIFTTMAESGRHADFVLCIGDDRSDEDMFEIIGNATSSGVLSSNASVFACTVGQK--- 818 (856)
Q Consensus 742 v~~g~~~vEI~p~gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~--- 818 (856)
..+.++.| .+|+.+++.+.+ . +.|+++||+.||.+|++.++. +|++|+.
T Consensus 498 ----~~~~~~~P--~~K~~~v~~l~~-----~---~~v~~vGDg~ND~~al~~A~v--------------giamg~g~~~ 549 (645)
T 3j08_A 498 ----LVIAEVLP--HQKSEEVKKLQA-----K---EVVAFVGDGINDAPALAQADL--------------GIAVGSGSDV 549 (645)
T ss_dssp ----EEECSCCT--TCHHHHHHHHTT-----T---CCEEEEECSSSCHHHHHHSSE--------------EEEECCCSCC
T ss_pred ----EEEEeCCH--HhHHHHHHHHhh-----C---CeEEEEeCCHhHHHHHHhCCE--------------EEEeCCCcHH
Confidence 01111223 279999888743 2 789999999999999999984 6788764
Q ss_pred -ccccceEc--CChhHHHHHHHH
Q 003025 819 -PSKAKYYL--DDAAEVVTMLEA 838 (856)
Q Consensus 819 -~s~A~y~l--~~~~eV~~~L~~ 838 (856)
+..|++++ ++.+++.++++.
T Consensus 550 a~~~AD~vl~~~~~~~i~~~i~~ 572 (645)
T 3j08_A 550 AVESGDIVLIRDDLRDVVAAIQL 572 (645)
T ss_dssp SSCCSSSEESSCCTTHHHHHHHH
T ss_pred HHHhCCEEEecCCHHHHHHHHHH
Confidence 57788988 678888877753
|
| >3kbb_A Phosphorylated carbohydrates phosphatase TM_1254; hydrolase, arbohydrate metabolism, COBA magnesium, manganese, metal-binding, nickel; HET: MSE GOL; 1.74A {Thermotoga maritima MSB8} | Back alignment and structure |
|---|
Probab=98.26 E-value=6e-07 Score=90.95 Aligned_cols=69 Identities=10% Similarity=0.166 Sum_probs=54.2
Q ss_pred HHHHHHHHHHHhhhcCCCcceEEEEeCCchhHHHHHHccccccCCCCCCCccEEEEEeCCCc-----cccceEcCChhHH
Q 003025 758 KGVVAEKIFTTMAESGRHADFVLCIGDDRSDEDMFEIIGNATSSGVLSSNASVFACTVGQKP-----SKAKYYLDDAAEV 832 (856)
Q Consensus 758 KG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~~-----s~A~y~l~~~~eV 832 (856)
+....+.+++++ |++|+++++|||+.+|+.+-+.+|.. .+++|+.|..+ .....++.+++++
T Consensus 142 ~p~~~~~a~~~l---g~~p~e~l~VgDs~~Di~aA~~aG~~----------~i~~v~~g~~~~~~l~~~~~~~i~~~~el 208 (216)
T 3kbb_A 142 DPEIYLLVLERL---NVVPEKVVVFEDSKSGVEAAKSAGIE----------RIYGVVHSLNDGKALLEAGAVALVKPEEI 208 (216)
T ss_dssp STHHHHHHHHHH---TCCGGGEEEEECSHHHHHHHHHTTCC----------CEEEECCSSSCCHHHHHTTCSEEECGGGH
T ss_pred cHHHHHHHHHhh---CCCccceEEEecCHHHHHHHHHcCCc----------EEEEecCCCCCHHHHHhCCCcEECCHHHH
Confidence 567889999999 99999999999999999999999974 34567777532 2223445578999
Q ss_pred HHHHHHH
Q 003025 833 VTMLEAL 839 (856)
Q Consensus 833 ~~~L~~L 839 (856)
++.|+.|
T Consensus 209 i~~l~eL 215 (216)
T 3kbb_A 209 LNVLKEV 215 (216)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9999876
|
| >3p96_A Phosphoserine phosphatase SERB; ssgcid, structural genomics, structural genomics center for infectious disease, hydrolas; 2.05A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=98.24 E-value=7.6e-07 Score=100.60 Aligned_cols=64 Identities=20% Similarity=0.228 Sum_probs=52.2
Q ss_pred CHHHHHHHHHHHhhhcCCCcceEEEEeCCchhHHHHHHccccccCCCCCCCccEEEEEeCCC---ccccceEcC--ChhH
Q 003025 757 SKGVVAEKIFTTMAESGRHADFVLCIGDDRSDEDMFEIIGNATSSGVLSSNASVFACTVGQK---PSKAKYYLD--DAAE 831 (856)
Q Consensus 757 sKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~---~s~A~y~l~--~~~e 831 (856)
.|..+++.+++++ |++++++++|||+.||++|++.+|. +++++.+ +..|++.++ +.++
T Consensus 323 pk~~~~~~~~~~~---gi~~~~~i~vGD~~~Di~~a~~aG~--------------~va~~~~~~~~~~ad~~i~~~~l~~ 385 (415)
T 3p96_A 323 GKATALREFAQRA---GVPMAQTVAVGDGANDIDMLAAAGL--------------GIAFNAKPALREVADASLSHPYLDT 385 (415)
T ss_dssp HHHHHHHHHHHHH---TCCGGGEEEEECSGGGHHHHHHSSE--------------EEEESCCHHHHHHCSEEECSSCTTH
T ss_pred chHHHHHHHHHHc---CcChhhEEEEECCHHHHHHHHHCCC--------------eEEECCCHHHHHhCCEEEccCCHHH
Confidence 4899999999999 9999999999999999999999995 4555433 367888875 5677
Q ss_pred HHHHHH
Q 003025 832 VVTMLE 837 (856)
Q Consensus 832 V~~~L~ 837 (856)
++.+|.
T Consensus 386 ll~~l~ 391 (415)
T 3p96_A 386 VLFLLG 391 (415)
T ss_dssp HHHHTT
T ss_pred HHHHhC
Confidence 777663
|
| >3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} | Back alignment and structure |
|---|
Probab=98.23 E-value=1.4e-06 Score=105.23 Aligned_cols=139 Identities=18% Similarity=0.245 Sum_probs=104.1
Q ss_pred HHHHHHHcCCcEEEEEecCCCCCCCCCCCCCCCHHHHHHHHHHHhhCCCeEEEecCCChhhHHHhhcCCCCccEEeeCCE
Q 003025 581 AIVSAYLRSKSRAILFDYDGTVMPQTSINKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSPCKKLGIAAEHGY 660 (856)
Q Consensus 581 ~i~~~y~~s~~rlI~~DlDGTLl~~~~~~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~~~~lgliaenG~ 660 (856)
...+.+.....+.+++..||+++..-....++.+++.++|++| ++.|+.++++||+....+..+... +++.
T Consensus 505 ~~~~~~~~~g~~~~~va~~~~~~G~i~i~D~~~~~~~~~i~~l-~~~Gi~v~~~TGd~~~~a~~ia~~---lgi~----- 575 (723)
T 3j09_A 505 LALEKLEREAKTAVIVARNGRVEGIIAVSDTLKESAKPAVQEL-KRMGIKVGMITGDNWRSAEAISRE---LNLD----- 575 (723)
T ss_dssp HHHHHHHTTTCEEEEEEETTEEEEEEEEECCSCTTHHHHHHHH-HHTTCEEEEECSSCHHHHHHHHHH---HTCS-----
T ss_pred HHHHHHHhcCCeEEEEEECCEEEEEEeecCCcchhHHHHHHHH-HHCCCEEEEECCCCHHHHHHHHHH---cCCc-----
Confidence 3445556677899999999998752223456788999999997 888999999999999988887743 2220
Q ss_pred EEEeCCCcceEecCCCCcccHHHHHHHHHHHHhhcCCcceEEecccceEEeeecCCCCCCchhHHHHHHHHHHHhcCCCe
Q 003025 661 FMRWSADEEWQNCGQSVDFGWIQIAEPVMKLYTESTDGSYIEIKESALVWHHRDADPGFGSSQAKELLDHLESVLANEPA 740 (856)
Q Consensus 661 ~I~~~~~~~w~~~~~~~~~~w~~~v~~i~~~~~~~~~Gs~ie~k~~~l~~~~~~~dp~~~~~~a~el~~~L~~~l~~~~~ 740 (856)
T Consensus 576 -------------------------------------------------------------------------------- 575 (723)
T 3j09_A 576 -------------------------------------------------------------------------------- 575 (723)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred EEEEcCeEEEEEeCCCCHHHHHHHHHHHhhhcCCCcceEEEEeCCchhHHHHHHccccccCCCCCCCccEEEEEeCCC--
Q 003025 741 AVKSGQFIVEVKPQGVSKGVVAEKIFTTMAESGRHADFVLCIGDDRSDEDMFEIIGNATSSGVLSSNASVFACTVGQK-- 818 (856)
Q Consensus 741 ~v~~g~~~vEI~p~gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~-- 818 (856)
..+.++.| .+|+.+++.+.+ . +.|+++||+.||.+|++.++ +++++|+.
T Consensus 576 -----~~~~~~~P--~~K~~~v~~l~~-----~---~~v~~vGDg~ND~~al~~A~--------------vgiamg~g~~ 626 (723)
T 3j09_A 576 -----LVIAEVLP--HQKSEEVKKLQA-----K---EVVAFVGDGINDAPALAQAD--------------LGIAVGSGSD 626 (723)
T ss_dssp -----EEECSCCT--TCHHHHHHHHTT-----T---CCEEEEECSSTTHHHHHHSS--------------EEEECCCCSC
T ss_pred -----EEEccCCH--HHHHHHHHHHhc-----C---CeEEEEECChhhHHHHhhCC--------------EEEEeCCCcH
Confidence 00111122 269999888743 2 78999999999999999998 46888764
Q ss_pred --ccccceEc--CChhHHHHHHH
Q 003025 819 --PSKAKYYL--DDAAEVVTMLE 837 (856)
Q Consensus 819 --~s~A~y~l--~~~~eV~~~L~ 837 (856)
+..|++++ ++.+++.++++
T Consensus 627 ~a~~~AD~vl~~~~~~~i~~~i~ 649 (723)
T 3j09_A 627 VAVESGDIVLIRDDLRDVVAAIQ 649 (723)
T ss_dssp CSSCCSSEECSSCCTTHHHHHHH
T ss_pred HHHHhCCEEEeCCCHHHHHHHHH
Confidence 57888998 67888888776
|
| >2hx1_A Predicted sugar phosphatases of the HAD superfamily; ZP_00311070.1, possible sugar phosphatase, structural genomics; HET: MSE EPE; 2.10A {Cytophaga hutchinsonii} | Back alignment and structure |
|---|
Probab=98.23 E-value=8e-06 Score=86.86 Aligned_cols=54 Identities=19% Similarity=0.316 Sum_probs=44.5
Q ss_pred CcEEEEEecCCCCCCCCCCCCCCCHHHHHHHHHHHhhCCCeEEEecC---CChhhHHHhhcC
Q 003025 590 KSRAILFDYDGTVMPQTSINKAPSQAVISIINTLCNDARNTVFVVSG---RGRDCLGKWFSP 648 (856)
Q Consensus 590 ~~rlI~~DlDGTLl~~~~~~~~~s~~~~~aL~~L~~d~g~~V~I~TG---R~~~~l~~~~~~ 648 (856)
++|+|+||+||||++ .. .+.+.+.++|++| ++.|+.|+++|| |+...+.+.+..
T Consensus 13 ~~k~i~~D~DGtL~~---~~-~~~~~~~~~l~~l-~~~g~~~~~~Tn~~~r~~~~~~~~l~~ 69 (284)
T 2hx1_A 13 KYKCIFFDAFGVLKT---YN-GLLPGIENTFDYL-KAQGQDYYIVTNDASRSPEQLADSYHK 69 (284)
T ss_dssp GCSEEEECSBTTTEE---TT-EECTTHHHHHHHH-HHTTCEEEEEECCCSSCHHHHHHHHHH
T ss_pred cCCEEEEcCcCCcCc---CC-eeChhHHHHHHHH-HHCCCEEEEEeCCCCcCHHHHHHHHHH
Confidence 589999999999998 33 3557889999997 788999999995 888777776644
|
| >2fi1_A Hydrolase, haloacid dehalogenase-like family; structural genomics, haloacid dehalogenase-like F PSI, protein structure initiative; 1.40A {Streptococcus pneumoniae} SCOP: c.108.1.3 | Back alignment and structure |
|---|
Probab=98.22 E-value=2.9e-07 Score=91.03 Aligned_cols=41 Identities=15% Similarity=-0.044 Sum_probs=36.5
Q ss_pred eCCCCHHHHHHHHHHHhhhcCCCcceEEEEeCCchhHHHHHHcccc
Q 003025 753 PQGVSKGVVAEKIFTTMAESGRHADFVLCIGDDRSDEDMFEIIGNA 798 (856)
Q Consensus 753 p~gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~ 798 (856)
+.+..|+.+++.+++++ |++ ++++|||+.||++|++.+|..
T Consensus 134 ~~~kp~~~~~~~~~~~~---~~~--~~~~iGD~~~Di~~a~~aG~~ 174 (190)
T 2fi1_A 134 FKRKPNPESMLYLREKY---QIS--SGLVIGDRPIDIEAGQAAGLD 174 (190)
T ss_dssp CCCTTSCHHHHHHHHHT---TCS--SEEEEESSHHHHHHHHHTTCE
T ss_pred CCCCCCHHHHHHHHHHc---CCC--eEEEEcCCHHHHHHHHHcCCe
Confidence 34566899999999999 887 999999999999999999963
|
| >1xpj_A Hypothetical protein; structural genomics, MCSG, protein STR initiative, PSI, midwest center for structural genomics, UN function; HET: TLA; 2.30A {Vibrio cholerae} SCOP: c.108.1.18 | Back alignment and structure |
|---|
Probab=98.19 E-value=1.3e-06 Score=81.69 Aligned_cols=47 Identities=19% Similarity=0.348 Sum_probs=40.6
Q ss_pred cEEEEEecCCCCCCCCCCCC------CCCHHHHHHHHHHHhhCCCeEEEecCCChhh
Q 003025 591 SRAILFDYDGTVMPQTSINK------APSQAVISIINTLCNDARNTVFVVSGRGRDC 641 (856)
Q Consensus 591 ~rlI~~DlDGTLl~~~~~~~------~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~ 641 (856)
+|+|++|+||||++ ... .+++.+.++|++| +++|+.++++|||+...
T Consensus 1 ik~i~~DlDGTL~~---~~~~~~~~~~~~~~~~~~l~~l-~~~Gi~~~iaTGR~~~~ 53 (126)
T 1xpj_A 1 MKKLIVDLDGTLTQ---ANTSDYRNVLPRLDVIEQLREY-HQLGFEIVISTARNMRT 53 (126)
T ss_dssp CCEEEECSTTTTBC---CCCSCGGGCCBCHHHHHHHHHH-HHTTCEEEEEECTTTTT
T ss_pred CCEEEEecCCCCCC---CCCCccccCCCCHHHHHHHHHH-HhCCCeEEEEeCCChhh
Confidence 47999999999998 443 5789999999997 77899999999998754
|
| >3rfu_A Copper efflux ATPase; alpha helical, CPC, CXXC, ATP-binding, hydrolase, ION transp magnesium, Cu+, membrane, metal-binding; 3.20A {Legionella pneumophila subsp} | Back alignment and structure |
|---|
Probab=98.12 E-value=1.6e-06 Score=104.33 Aligned_cols=139 Identities=14% Similarity=0.185 Sum_probs=101.4
Q ss_pred HHHHHHcCCcEEEEEecCCCCCCCCCCCCCCCHHHHHHHHHHHhhCCCeEEEecCCChhhHHHhhcCCCCccEEeeCCEE
Q 003025 582 IVSAYLRSKSRAILFDYDGTVMPQTSINKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSPCKKLGIAAEHGYF 661 (856)
Q Consensus 582 i~~~y~~s~~rlI~~DlDGTLl~~~~~~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~~~~lgliaenG~~ 661 (856)
..+.+.....+.+++.+||+++..-....++.+++.++|++| ++.|+.++++|||+...+...... +++..
T Consensus 525 ~~~~~~~~G~~vl~va~d~~~~G~i~i~D~i~~~~~~aI~~L-~~~Gi~v~mlTGd~~~~a~~ia~~---lgi~~----- 595 (736)
T 3rfu_A 525 KADELRGKGASVMFMAVDGKTVALLVVEDPIKSSTPETILEL-QQSGIEIVMLTGDSKRTAEAVAGT---LGIKK----- 595 (736)
T ss_dssp HHHHHHHTTCEEEEEEETTEEEEEEEEECCBCSSHHHHHHHH-HHHTCEEEEECSSCHHHHHHHHHH---HTCCC-----
T ss_pred HHHHHHhcCCeEEEEEECCEEEEEEEeeccchhhHHHHHHHH-HHCCCeEEEECCCCHHHHHHHHHH---cCCCE-----
Confidence 345566677899999999998742113456788899999997 888999999999999998888743 33310
Q ss_pred EEeCCCcceEecCCCCcccHHHHHHHHHHHHhhcCCcceEEecccceEEeeecCCCCCCchhHHHHHHHHHHHhcCCCeE
Q 003025 662 MRWSADEEWQNCGQSVDFGWIQIAEPVMKLYTESTDGSYIEIKESALVWHHRDADPGFGSSQAKELLDHLESVLANEPAA 741 (856)
Q Consensus 662 I~~~~~~~w~~~~~~~~~~w~~~v~~i~~~~~~~~~Gs~ie~k~~~l~~~~~~~dp~~~~~~a~el~~~L~~~l~~~~~~ 741 (856)
.+
T Consensus 596 -------------------------------------------------v~----------------------------- 597 (736)
T 3rfu_A 596 -------------------------------------------------VV----------------------------- 597 (736)
T ss_dssp -------------------------------------------------EE-----------------------------
T ss_pred -------------------------------------------------EE-----------------------------
Confidence 00
Q ss_pred EEEcCeEEEEEeCCCCHHHHHHHHHHHhhhcCCCcceEEEEeCCchhHHHHHHccccccCCCCCCCccEEEEEeCCC---
Q 003025 742 VKSGQFIVEVKPQGVSKGVVAEKIFTTMAESGRHADFVLCIGDDRSDEDMFEIIGNATSSGVLSSNASVFACTVGQK--- 818 (856)
Q Consensus 742 v~~g~~~vEI~p~gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~--- 818 (856)
.++.|. +|...++.+.++ .+.|+++||+.||.+||+.++ ++|++|+.
T Consensus 598 -------a~~~P~--~K~~~v~~l~~~-------g~~V~~vGDG~ND~paL~~Ad--------------vGIAmg~g~d~ 647 (736)
T 3rfu_A 598 -------AEIMPE--DKSRIVSELKDK-------GLIVAMAGDGVNDAPALAKAD--------------IGIAMGTGTDV 647 (736)
T ss_dssp -------CSCCHH--HHHHHHHHHHHH-------SCCEEEEECSSTTHHHHHHSS--------------EEEEESSSCSH
T ss_pred -------EecCHH--HHHHHHHHHHhc-------CCEEEEEECChHhHHHHHhCC--------------EEEEeCCccHH
Confidence 011121 377777777664 256999999999999999998 47888875
Q ss_pred -ccccceEc--CChhHHHHHHH
Q 003025 819 -PSKAKYYL--DDAAEVVTMLE 837 (856)
Q Consensus 819 -~s~A~y~l--~~~~eV~~~L~ 837 (856)
+..|++++ ++.+++.+.++
T Consensus 648 a~~~AD~vl~~~~~~~i~~ai~ 669 (736)
T 3rfu_A 648 AIESAGVTLLHGDLRGIAKARR 669 (736)
T ss_dssp HHHHCSEEECSCCSTTHHHHHH
T ss_pred HHHhCCEEEccCCHHHHHHHHH
Confidence 46788987 56777776665
|
| >1nnl_A L-3-phosphoserine phosphatase; PSP, HPSP, phospho-aspartyl, hydrolase; 1.53A {Homo sapiens} SCOP: c.108.1.4 PDB: 1l8l_A* 1l8o_A | Back alignment and structure |
|---|
Probab=98.11 E-value=4.4e-06 Score=85.14 Aligned_cols=62 Identities=24% Similarity=0.336 Sum_probs=47.9
Q ss_pred CHHHHHHHHHHHhhhcCCCcceEEEEeCCchhHHHHHHccccccCCCCCCCccEEEEEeCCC------ccccceEcCChh
Q 003025 757 SKGVVAEKIFTTMAESGRHADFVLCIGDDRSDEDMFEIIGNATSSGVLSSNASVFACTVGQK------PSKAKYYLDDAA 830 (856)
Q Consensus 757 sKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~------~s~A~y~l~~~~ 830 (856)
.|..+++.+++++ |+ +++++|||+.||+.+.+.+|. +|.+|.. ...|.+++++..
T Consensus 157 ~Kp~~~~~~~~~~---~~--~~~~~vGDs~~Di~~a~~ag~--------------~i~~~~~~~~~~~~~~~~~~~~~~~ 217 (225)
T 1nnl_A 157 GKGKVIKLLKEKF---HF--KKIIMIGDGATDMEACPPADA--------------FIGFGGNVIRQQVKDNAKWYITDFV 217 (225)
T ss_dssp HHHHHHHHHHHHH---CC--SCEEEEESSHHHHTTTTTSSE--------------EEEECSSCCCHHHHHHCSEEESCGG
T ss_pred chHHHHHHHHHHc---CC--CcEEEEeCcHHhHHHHHhCCe--------------EEEecCccccHHHHhcCCeeecCHH
Confidence 5888999999988 76 789999999999999998873 5666643 135788889888
Q ss_pred HHHHHHH
Q 003025 831 EVVTMLE 837 (856)
Q Consensus 831 eV~~~L~ 837 (856)
++.++|+
T Consensus 218 el~~~l~ 224 (225)
T 1nnl_A 218 ELLGELE 224 (225)
T ss_dssp GGCC---
T ss_pred HHHHHHh
Confidence 8766653
|
| >3otg_A CALG1; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD; 2.08A {Micromonospora echinospora} PDB: 3oth_A* | Back alignment and structure |
|---|
Probab=98.03 E-value=1.1e-05 Score=90.11 Aligned_cols=157 Identities=12% Similarity=0.026 Sum_probs=99.2
Q ss_pred CCeEEEeccCccccCCHHHHHHHHHHHHHhCCCCcCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCcccE
Q 003025 335 GKTVLLGVDDMDIFKGVDLKLLAMEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPV 414 (856)
Q Consensus 335 ~k~iil~VdRld~~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~~~~lv~~IN~~~~~~~~~pv 414 (856)
.+.+++++|++. .|+...+..+++.+ ++. ++ .++.++.+. .+.++++ + ..+.
T Consensus 242 ~~~vlv~~G~~~-~~~~~~~~~~~~~l-~~~-~~----~~~~~~g~~----~~~~~l~----~-------------~~~~ 293 (412)
T 3otg_A 242 RPLVYLTLGTSS-GGTVEVLRAAIDGL-AGL-DA----DVLVASGPS----LDVSGLG----E-------------VPAN 293 (412)
T ss_dssp SCEEEEECTTTT-CSCHHHHHHHHHHH-HTS-SS----EEEEECCSS----CCCTTCC----C-------------CCTT
T ss_pred CCEEEEEcCCCC-cCcHHHHHHHHHHH-HcC-CC----EEEEEECCC----CChhhhc----c-------------CCCc
Confidence 456889999996 66666666666555 333 22 244444321 1111111 0 1122
Q ss_pred EEEcCCCCHHHHHHHHHhcceeeeccccccCCCcccceeeeecCCCCCCCCCCCCCCCCceEEecCCc----cccccc--
Q 003025 415 VFIDKPVTLSERAAYYTIAECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFI----GCSPSL-- 488 (856)
Q Consensus 415 v~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~g~lV~Se~~----G~~~~l-- 488 (856)
+.+.+.++ +..+|+.||+||.+| |. .+.+|||+|+. |+|+.... +.++.+
T Consensus 294 v~~~~~~~---~~~~l~~ad~~v~~~---g~-~t~~Ea~a~G~-----------------P~v~~p~~~~q~~~~~~v~~ 349 (412)
T 3otg_A 294 VRLESWVP---QAALLPHVDLVVHHG---GS-GTTLGALGAGV-----------------PQLSFPWAGDSFANAQAVAQ 349 (412)
T ss_dssp EEEESCCC---HHHHGGGCSEEEESC---CH-HHHHHHHHHTC-----------------CEEECCCSTTHHHHHHHHHH
T ss_pred EEEeCCCC---HHHHHhcCcEEEECC---ch-HHHHHHHHhCC-----------------CEEecCCchhHHHHHHHHHH
Confidence 34556664 778899999999776 22 58899999955 88885444 355555
Q ss_pred -CCceeeCCC--CHHHHHHHHHHHHcCCHHHHHHHHHHHhhhhhcCCHHHHHHHHHHHH
Q 003025 489 -SGAIRVNPW--NIEATAEAMHEAIQMNEAEKQLRHEKHYRYVSTHDVAYWARSFFQDM 544 (856)
Q Consensus 489 -~~al~VnP~--d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~l 544 (856)
..|++++|. |.++++++|.++|+. ++.++...+..+++...++....++.+.+-+
T Consensus 350 ~g~g~~~~~~~~~~~~l~~ai~~ll~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 407 (412)
T 3otg_A 350 AGAGDHLLPDNISPDSVSGAAKRLLAE-ESYRAGARAVAAEIAAMPGPDEVVRLLPGFA 407 (412)
T ss_dssp HTSEEECCGGGCCHHHHHHHHHHHHHC-HHHHHHHHHHHHHHHHSCCHHHHHTTHHHHH
T ss_pred cCCEEecCcccCCHHHHHHHHHHHHhC-HHHHHHHHHHHHHHhcCCCHHHHHHHHHHHh
Confidence 347888887 899999999999985 4445555555666677777777666554433
|
| >3ixz_A Potassium-transporting ATPase alpha; ION pump, H+, K+-ATPase, P-type ATPase, membrane protein, hydrolase, aluminium fluoride, ATP-binding; 6.50A {Sus scrofa} PDB: 2yn9_A 2xzb_A 1iwc_A 1iwf_A | Back alignment and structure |
|---|
Probab=98.01 E-value=2e-05 Score=98.93 Aligned_cols=165 Identities=21% Similarity=0.240 Sum_probs=93.8
Q ss_pred CCCCCCHHHHHHHHHHHhhCCCeEEEecCCChhhHHHhhcCCCCccEEeeCCEEEEeCCCcceEecCCCCcccHHHHHHH
Q 003025 608 INKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSPCKKLGIAAEHGYFMRWSADEEWQNCGQSVDFGWIQIAEP 687 (856)
Q Consensus 608 ~~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~~~~lgliaenG~~I~~~~~~~w~~~~~~~~~~w~~~v~~ 687 (856)
...++.+++.++|++| ++.|+.|+++|||....+..+... +++..+++..+ .+....
T Consensus 601 i~Dp~r~~~~~aI~~l-~~aGI~vvmiTGd~~~tA~~ia~~---lgi~~~~~~~i-------------------~~~~~~ 657 (1034)
T 3ixz_A 601 MIDPPRATVPDAVLKC-RTAGIRVIMVTGDHPITAKAIAAS---VGIISEGSETV-------------------EDIAAR 657 (1034)
T ss_pred ccCCCchhHHHHHHHH-HHcCCeEEEEeCCCHHHHHHHHHH---cCCCCCCchHH-------------------HHHHHh
Confidence 3456889999999995 999999999999999999988843 44543222110 000000
Q ss_pred HHHHHhhcCCcceEEec-ccceEEeeecCCCCCCchhHHHHHHHHHHHhcCCCeEEEEcCeEEEEEeCCCCHHHHHHHHH
Q 003025 688 VMKLYTESTDGSYIEIK-ESALVWHHRDADPGFGSSQAKELLDHLESVLANEPAAVKSGQFIVEVKPQGVSKGVVAEKIF 766 (856)
Q Consensus 688 i~~~~~~~~~Gs~ie~k-~~~l~~~~~~~dp~~~~~~a~el~~~L~~~l~~~~~~v~~g~~~vEI~p~gvsKG~al~~Ll 766 (856)
..... .....+ .......-. ++.....+++.+. +...... -+..+.|. .|...++.+.
T Consensus 658 -~~~~~-----~~~~~~~~~~~~~~g~----~l~~~~~~~l~~~----~~~~~~~-----v~ar~~P~--~K~~iv~~lq 716 (1034)
T 3ixz_A 658 -LRVPV-----DQVNRKDARACVINGM----QLKDMDPSELVEA----LRTHPEM-----VFARTSPQ--QKLVIVESCQ 716 (1034)
T ss_pred -hCccc-----hhccccccceeEEecH----hhhhCCHHHHHHH----HHhCCce-----EEEecCHH--HHHHHHHHHH
Confidence 00000 000000 000011000 0000011222222 2222111 13333443 5888877765
Q ss_pred HHhhhcCCCcceEEEEeCCchhHHHHHHccccccCCCCCCCccEEEEEeC-CC----ccccceEcC--ChhHHHHHHH
Q 003025 767 TTMAESGRHADFVLCIGDDRSDEDMFEIIGNATSSGVLSSNASVFACTVG-QK----PSKAKYYLD--DAAEVVTMLE 837 (856)
Q Consensus 767 ~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG-~~----~s~A~y~l~--~~~eV~~~L~ 837 (856)
+. | ..|+++||+.||.+||+.|+. +|++| +. +..|++++. +.++++..++
T Consensus 717 ~~----g---~~V~a~GDG~ND~~mLk~A~v--------------GIAMg~ng~d~aK~aAD~Vl~~~~~~gI~~ai~ 773 (1034)
T 3ixz_A 717 RL----G---AIVAVTGDGVNDSPALKKADI--------------GVAMGIAGSDAAKNAADMILLDDNFASIVTGVE 773 (1034)
T ss_pred Hc----C---CEEEEECCcHHhHHHHHHCCe--------------eEEeCCccCHHHHHhcCEEeccCCchHHHHHHH
Confidence 43 2 469999999999999999984 68888 53 578999984 5677887775
|
| >2b0c_A Putative phosphatase; alpha-D-glucose-1-phosphate, structural genomic protein structure initiative, midwest center for structural genomics, MCSG; HET: G1P; 2.00A {Escherichia coli} SCOP: c.108.1.2 | Back alignment and structure |
|---|
Probab=97.94 E-value=2.1e-06 Score=85.97 Aligned_cols=36 Identities=8% Similarity=0.148 Sum_probs=33.2
Q ss_pred HHHHHHHHHHhhhcCCCcceEEEEeCCchhHHHHHHccc
Q 003025 759 GVVAEKIFTTMAESGRHADFVLCIGDDRSDEDMFEIIGN 797 (856)
Q Consensus 759 G~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~ 797 (856)
..+++.+++++ |++++++++|||+.||+.|.+.+|.
T Consensus 151 ~~~~~~~~~~~---~~~~~~~~~vgD~~~Di~~a~~aG~ 186 (206)
T 2b0c_A 151 ARIYQHVLQAE---GFSPSDTVFFDDNADNIEGANQLGI 186 (206)
T ss_dssp HHHHHHHHHHH---TCCGGGEEEEESCHHHHHHHHTTTC
T ss_pred HHHHHHHHHHc---CCCHHHeEEeCCCHHHHHHHHHcCC
Confidence 45788999999 9999999999999999999999996
|
| >1l5w_A Maltodextrin phosphorylase; enzymatic catalysis, substrate complex, trans; HET: GLC PLP; 1.80A {Escherichia coli} SCOP: c.87.1.4 PDB: 1l5v_A* 1l6i_A* 2asv_A* 2av6_A* 2aw3_A* 2azd_A* 1qm5_A* 1e4o_A* 2ecp_A* 1ahp_A* | Back alignment and structure |
|---|
Probab=97.90 E-value=5.2e-05 Score=90.10 Aligned_cols=149 Identities=14% Similarity=0.112 Sum_probs=103.5
Q ss_pred CCCeEEEeccCccccCCHHH-HHHHHHHHHH--hCCCCc-CceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCC
Q 003025 334 EGKTVLLGVDDMDIFKGVDL-KLLAMEHLLK--QHPKWQ-GRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRP 409 (856)
Q Consensus 334 ~~k~iil~VdRld~~KGi~~-~l~A~~~ll~--~~p~~~-~~vvLvqi~~p~r~~~~~~~~l~~~~~~lv~~IN~~~~~~ 409 (856)
++..+++.|.|+...||..+ .+..++++++ .+|+.. ..+++|..|....+. ..-..+.+.+.++++.||..-.-.
T Consensus 524 pd~l~~~~vkRl~eYKRq~Lnil~ii~~~~~i~~~~~~~~~p~q~If~GKA~P~y-~~aK~iIk~i~~va~~in~Dp~~~ 602 (796)
T 1l5w_A 524 PQAIFDIQIKRLHEYKRQHLNLLHILALYKEIRENPQADRVPRVFLFGAKAAPGY-YLAKNIIFAINKVADVINNDPLVG 602 (796)
T ss_dssp TTSEEEEEESCCCGGGTHHHHHHHHHHHHHHHHTCTTCCCCCEEEEEECCCCTTC-HHHHHHHHHHHHHHHHHHTCTTTG
T ss_pred CCcceEeeeecchhhcccCEeHHHHHHHHHHHhcCCCCCCCCeEEEEEecCChhH-HHHHHHHHHHHHHHHHhccccccC
Confidence 35789999999999999999 8999988865 455421 247777776544232 222455667888888888642212
Q ss_pred CcccEEEEcCCCCHHHHHHHHHhcceeeeccc--cccCCCcccceeeeecCCCCCCCCCCCCCCCCceEEecCCcccccc
Q 003025 410 GYEPVVFIDKPVTLSERAAYYTIAECVVVTAV--RDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIGCSPS 487 (856)
Q Consensus 410 ~~~pvv~~~~~v~~~el~aly~~ADv~vvtS~--~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~ 487 (856)
+.-.|+++. ..+-.--..+|.+||+++.||. .|.=|+.-+-||.- |.|-+|..-|+-.+
T Consensus 603 ~~lKVvfl~-nY~vslA~~I~~gaDv~l~~S~a~~EAsGTs~MKam~N------------------GaL~iGtLDGanvE 663 (796)
T 1l5w_A 603 DKLKVVFLP-DYCVSAAEKLIPAADISEQISTAGKEASGTGNMKLALN------------------GALTVGTLDGANVE 663 (796)
T ss_dssp GGEEEEECS-SCCHHHHHHHGGGCSEEEECCCTTTCCCCSHHHHHHHT------------------TCEEEECSCTTHHH
T ss_pred CceEEEEEC-CCCHHHHHHHhhhcceeecCCCCCCCCCchHHHHHHHc------------------CCeeecCcCCeeee
Confidence 222355554 4566666688999999999999 89888888888874 45666777676554
Q ss_pred c------CCceeeCCCCHHHHH
Q 003025 488 L------SGAIRVNPWNIEATA 503 (856)
Q Consensus 488 l------~~al~VnP~d~~~~A 503 (856)
+ .+++++-. +.+++.
T Consensus 664 i~e~vG~~NgF~FG~-~~~ev~ 684 (796)
T 1l5w_A 664 IAEKVGEENIFIFGH-TVEQVK 684 (796)
T ss_dssp HHHHHCGGGSEECSC-CHHHHH
T ss_pred hhhccCCCcEEEecC-CHHHHH
Confidence 4 24788876 677766
|
| >3cnh_A Hydrolase family protein; NP_295428.1, predicted hydrolase of haloacid dehalogenase-LI superfamily; HET: MSE PG4; 1.66A {Deinococcus radiodurans R1} | Back alignment and structure |
|---|
Probab=97.89 E-value=1.2e-05 Score=80.04 Aligned_cols=37 Identities=8% Similarity=0.035 Sum_probs=34.4
Q ss_pred HHHHHHHHHHHhhhcCCCcceEEEEeCCchhHHHHHHccc
Q 003025 758 KGVVAEKIFTTMAESGRHADFVLCIGDDRSDEDMFEIIGN 797 (856)
Q Consensus 758 KG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~ 797 (856)
+...++.+++++ |++++++++|||+.||+.|.+.+|.
T Consensus 143 ~~~~~~~~~~~~---~~~~~~~~~vgD~~~Di~~a~~aG~ 179 (200)
T 3cnh_A 143 NPAMYRLGLTLA---QVRPEEAVMVDDRLQNVQAARAVGM 179 (200)
T ss_dssp CHHHHHHHHHHH---TCCGGGEEEEESCHHHHHHHHHTTC
T ss_pred CHHHHHHHHHHc---CCCHHHeEEeCCCHHHHHHHHHCCC
Confidence 567889999999 9999999999999999999999996
|
| >1rku_A Homoserine kinase; phosphoserine phosphatase, phosphoserine:homoserine phosphotransferase, THRH, phosphoserine phosphoryl donor; 1.47A {Pseudomonas aeruginosa} SCOP: c.108.1.11 PDB: 1rkv_A | Back alignment and structure |
|---|
Probab=97.89 E-value=6.5e-05 Score=75.23 Aligned_cols=69 Identities=10% Similarity=0.004 Sum_probs=49.9
Q ss_pred EeCCCCHHHHHHHHHHHhhhcCCCcceEEEEeCCchhHHHHHHccccccCCCCCCCccEEEEEeCCC---cccc-ceE-c
Q 003025 752 KPQGVSKGVVAEKIFTTMAESGRHADFVLCIGDDRSDEDMFEIIGNATSSGVLSSNASVFACTVGQK---PSKA-KYY-L 826 (856)
Q Consensus 752 ~p~gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~---~s~A-~y~-l 826 (856)
+|....|..+++.+ +..++++++|||+.||++|++.+|.. +.++.. ...+ .+. +
T Consensus 128 ~p~p~~~~~~l~~l-------~~~~~~~~~iGD~~~Di~~a~~aG~~--------------~~~~~~~~~~~~~~~~~~~ 186 (206)
T 1rku_A 128 LRQKDPKRQSVIAF-------KSLYYRVIAAGDSYNDTTMLSEAHAG--------------ILFHAPENVIREFPQFPAV 186 (206)
T ss_dssp CCSSSHHHHHHHHH-------HHTTCEEEEEECSSTTHHHHHHSSEE--------------EEESCCHHHHHHCTTSCEE
T ss_pred cCCCchHHHHHHHH-------HhcCCEEEEEeCChhhHHHHHhcCcc--------------EEECCcHHHHHHHhhhccc
Confidence 47766677776665 44578999999999999999999963 334432 1223 343 7
Q ss_pred CChhHHHHHHHHHHH
Q 003025 827 DDAAEVVTMLEALAE 841 (856)
Q Consensus 827 ~~~~eV~~~L~~L~~ 841 (856)
++..++.++|+.+..
T Consensus 187 ~~~~~l~~~l~~~~~ 201 (206)
T 1rku_A 187 HTYEDLKREFLKASS 201 (206)
T ss_dssp CSHHHHHHHHHHHCS
T ss_pred cchHHHHHHHHHHhc
Confidence 899999999988753
|
| >3q3e_A HMW1C-like glycosyltransferase; N-glycosylation; 2.10A {Actinobacillus pleuropneumoniae serovaorganism_taxid} PDB: 3q3h_A* 3q3i_A | Back alignment and structure |
|---|
Probab=97.85 E-value=5.5e-05 Score=88.16 Aligned_cols=173 Identities=6% Similarity=-0.109 Sum_probs=107.3
Q ss_pred CeEEEeccCccccCCHHHHHHHHHHHHHhCCCCcCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCcccEE
Q 003025 336 KTVLLGVDDMDIFKGVDLKLLAMEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVV 415 (856)
Q Consensus 336 k~iil~VdRld~~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~~~~lv~~IN~~~~~~~~~pvv 415 (856)
..++.+..|+ .|..+..+++|.+++++.|+.+ +.+..++. +.+... .+.+++.+. .| .+.+
T Consensus 441 ~v~Fg~fn~~--~Ki~p~~l~~WarIL~~vP~s~--L~l~~~g~---~~g~~~-~~~~~~~~~--GI---------~~Rv 501 (631)
T 3q3e_A 441 VVNIGIASTT--MKLNPYFLEALKAIRDRAKVKV--HFHFALGQ---SNGITH-PYVERFIKS--YL---------GDSA 501 (631)
T ss_dssp EEEEEEEECS--TTCCHHHHHHHHHHHHHCSSEE--EEEEEESS---CCGGGH-HHHHHHHHH--HH---------GGGE
T ss_pred eEEEEECCcc--ccCCHHHHHHHHHHHHhCCCcE--EEEEecCC---CchhhH-HHHHHHHHc--CC---------CccE
Confidence 4567777875 6999999999999999999632 11122332 123332 222232221 22 2234
Q ss_pred EEcCCCCHHHHHHHHHhcceeeeccccccCCCcccceeeeecCCCCCCCCCCCCCCCCceEEecCCcccccccC------
Q 003025 416 FIDKPVTLSERAAYYTIAECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIGCSPSLS------ 489 (856)
Q Consensus 416 ~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~------ 489 (856)
.|.+.++.++..++|+.||+|+.|+.+.| |+++.|||+|+. |||+..-.+.+.-++
T Consensus 502 ~F~g~~p~~e~la~y~~aDIfLDpfpy~G-gtTtlEALwmGV-----------------PVVTl~G~~~asRvgaSlL~~ 563 (631)
T 3q3e_A 502 TAHPHSPYHQYLRILHNCDMMVNPFPFGN-TNGIIDMVTLGL-----------------VGVCKTGAEVHEHIDEGLFKR 563 (631)
T ss_dssp EEECCCCHHHHHHHHHTCSEEECCSSSCC-SHHHHHHHHTTC-----------------CEEEECCSSHHHHHHHHHHHH
T ss_pred EEcCCCCHHHHHHHHhcCcEEEeCCcccC-ChHHHHHHHcCC-----------------CEEeccCCcHHHHhHHHHHHh
Confidence 56788999999999999999999998876 999999999944 777754332221111
Q ss_pred C---ceeeCCCCHHHHHHHHHHHHcCCHHHHHHHHHHHhhhhhc---CCHHHHHHHHHHHHHHHHH
Q 003025 490 G---AIRVNPWNIEATAEAMHEAIQMNEAEKQLRHEKHYRYVST---HDVAYWARSFFQDMERTCK 549 (856)
Q Consensus 490 ~---al~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~---~~~~~W~~~~l~~l~~~~~ 549 (856)
. .++| ..|.++.+++..++.+.+ +.++...+++++.+.+ ++ .|.+.|-+.++++..
T Consensus 564 ~GLpE~LI-A~d~eeYv~~Av~La~D~-~~l~~LR~~Lr~~~~~spLFd--~~~~~~e~~ye~~~~ 625 (631)
T 3q3e_A 564 LGLPEWLI-ANTVDEYVERAVRLAENH-QERLELRRYIIENNGLNTLFT--GDPRPMGQVFLEKLN 625 (631)
T ss_dssp TTCCGGGE-ESSHHHHHHHHHHHHHCH-HHHHHHHHHHHHSCCHHHHTC--SCCTHHHHHHHHHHH
T ss_pred cCCCccee-cCCHHHHHHHHHHHhCCH-HHHHHHHHHHHHHhhhCCCcc--hhHHHHHHHHHHHHH
Confidence 1 2223 247899988888888754 4444444455544432 22 455555555555443
|
| >4g9b_A Beta-PGM, beta-phosphoglucomutase; HAD, putative phosphoglucomutase, enzyme function initiative structural genomics, isomerase; 1.70A {Escherichia coli} | Back alignment and structure |
|---|
Probab=97.81 E-value=3.3e-05 Score=80.11 Aligned_cols=56 Identities=14% Similarity=0.153 Sum_probs=47.0
Q ss_pred HHHHHHHHHHHhhhcCCCcceEEEEeCCchhHHHHHHccccccCCCCCCCccEEEEEeCCCccccceEcCCh
Q 003025 758 KGVVAEKIFTTMAESGRHADFVLCIGDDRSDEDMFEIIGNATSSGVLSSNASVFACTVGQKPSKAKYYLDDA 829 (856)
Q Consensus 758 KG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~~s~A~y~l~~~ 829 (856)
.......+++++ |++|+++++|||+.+|+.+-+.+|. .+|.|+...+.|+..+++.
T Consensus 151 ~p~~~~~a~~~l---g~~p~e~l~VgDs~~di~aA~~aG~-------------~~I~V~~g~~~ad~~~~~~ 206 (243)
T 4g9b_A 151 DPEIFLAACAGL---GVPPQACIGIEDAQAGIDAINASGM-------------RSVGIGAGLTGAQLLLPST 206 (243)
T ss_dssp STHHHHHHHHHH---TSCGGGEEEEESSHHHHHHHHHHTC-------------EEEEESTTCCSCSEEESSG
T ss_pred cHHHHHHHHHHc---CCChHHEEEEcCCHHHHHHHHHcCC-------------EEEEECCCCCcHHHhcCCh
Confidence 356788899999 9999999999999999999999997 3677777667777777654
|
| >2c4m_A Glycogen phosphorylase; allosteric control, phosphate dependence, starch degrading, transferase, glycosyltransferase; HET: PLP; 1.9A {Corynebacterium callunae} | Back alignment and structure |
|---|
Probab=97.77 E-value=3.5e-05 Score=91.57 Aligned_cols=151 Identities=11% Similarity=0.139 Sum_probs=103.8
Q ss_pred CCCeEEEeccCccccCCHHH-HHHHHHHHHH--hCCCCc-CceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCC
Q 003025 334 EGKTVLLGVDDMDIFKGVDL-KLLAMEHLLK--QHPKWQ-GRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRP 409 (856)
Q Consensus 334 ~~k~iil~VdRld~~KGi~~-~l~A~~~ll~--~~p~~~-~~vvLvqi~~p~r~~~~~~~~l~~~~~~lv~~IN~~~~~~ 409 (856)
++..+++.|.|+...||..+ .+..++++++ ++|+.. ..+++|..|....+. ..-..+.+.+..+++-||..-.-.
T Consensus 514 pd~l~~~~vkRlheYKRq~Lnil~ii~~~~~i~~~~~~~~~p~q~If~GKA~P~y-~~aK~iIk~i~~va~~in~dp~~~ 592 (796)
T 2c4m_A 514 PESIFDVQIKRLHEYKRQLMNALYVLDLYFRIKEDGLTDIPARTVIFGAKAAPGY-VRAKAIIKLINSIADLVNNDPEVS 592 (796)
T ss_dssp TTSEEEEEECCCCGGGTHHHHHHHHHHHHHHHHTSCCCSSCCEEEEEECCCCTTC-HHHHHHHHHHHHHHHHHHTCTTTT
T ss_pred CCCcEEEEeecchhhcccCEeHHHHHHHHHHHhhCCCCCCCCeEEEEEecCCHhH-HHHHHHHHHHHHHHHHhccccccC
Confidence 36789999999999999999 8999998875 566521 247777776544222 222456667888888888743223
Q ss_pred CcccEEEEcCCCCHHHHHHHHHhcceeeeccc--cccCCCcccceeeeecCCCCCCCCCCCCCCCCceEEecCCcccccc
Q 003025 410 GYEPVVFIDKPVTLSERAAYYTIAECVVVTAV--RDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIGCSPS 487 (856)
Q Consensus 410 ~~~pvv~~~~~v~~~el~aly~~ADv~vvtS~--~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~ 487 (856)
+.-.|+++. ..+-.--..+|.+||+++.||. .|.=|+.-+-||.- |.|-+|..-|+-.+
T Consensus 593 ~~lKVvFl~-nY~vslA~~I~~gaDv~l~~S~a~~EAsGTs~MKam~N------------------GaL~iGtLDGanvE 653 (796)
T 2c4m_A 593 PLLKVVFVE-NYNVSPAEHILPASDVSEQISTAGKEASGTSNMKFMMN------------------GALTLGTMDGANVE 653 (796)
T ss_dssp TTEEEEEET-TCCHHHHHHHGGGCSEEEECCCTTSCSCCHHHHHHHHT------------------TCEEEEESSTHHHH
T ss_pred CceEEEEEC-CCCHHHHHHHhhhcceeecCCCCCCCCCchHHHHHHHc------------------CCeEEeccCCeEee
Confidence 333466665 4555556688999999999999 78888888888774 45556766666544
Q ss_pred c------CCceeeCC--CCHHHHHH
Q 003025 488 L------SGAIRVNP--WNIEATAE 504 (856)
Q Consensus 488 l------~~al~VnP--~d~~~~A~ 504 (856)
+ .+++++-. .+++++-.
T Consensus 654 i~e~vG~~NgF~FG~~~~ev~~l~~ 678 (796)
T 2c4m_A 654 IVDSVGEENAYIFGARVEELPALRE 678 (796)
T ss_dssp HHHHHCGGGSEEESCCTTTHHHHHH
T ss_pred hhhhcCCCcEEEecCchhhHHHHHH
Confidence 4 24777765 55555443
|
| >4dcc_A Putative haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 1.65A {Bacteroides thetaiotaomicron} PDB: 4dfd_A 4f71_A 4f72_A | Back alignment and structure |
|---|
Probab=97.74 E-value=5.7e-05 Score=77.11 Aligned_cols=38 Identities=11% Similarity=0.140 Sum_probs=34.6
Q ss_pred HHHHHHHHHHHhhhcCCCcceEEEEeCCchhHHHHHHcccc
Q 003025 758 KGVVAEKIFTTMAESGRHADFVLCIGDDRSDEDMFEIIGNA 798 (856)
Q Consensus 758 KG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~ 798 (856)
+..+.+.+++++ |++++++++|||+.||+.|.+.+|..
T Consensus 175 ~~~~~~~~~~~~---g~~~~~~~~vGD~~~Di~~a~~aG~~ 212 (229)
T 4dcc_A 175 EPEIFKAVTEDA---GIDPKETFFIDDSEINCKVAQELGIS 212 (229)
T ss_dssp CHHHHHHHHHHH---TCCGGGEEEECSCHHHHHHHHHTTCE
T ss_pred CHHHHHHHHHHc---CCCHHHeEEECCCHHHHHHHHHcCCE
Confidence 447789999999 99999999999999999999999963
|
| >3kc2_A Uncharacterized protein YKR070W; HAD-like, mitochondral protein, PSI, MCSG, structural genomi protein structure initiative; HET: MSE; 1.55A {Saccharomyces cerevisiae} PDB: 3rf6_A* | Back alignment and structure |
|---|
Probab=97.72 E-value=0.00056 Score=75.18 Aligned_cols=45 Identities=24% Similarity=0.376 Sum_probs=36.9
Q ss_pred CCcEEEEEecCCCCCCCCCCCCCCCHHHHHHHHHHHhhCCCeEEEecCCC
Q 003025 589 SKSRAILFDYDGTVMPQTSINKAPSQAVISIINTLCNDARNTVFVVSGRG 638 (856)
Q Consensus 589 s~~rlI~~DlDGTLl~~~~~~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~ 638 (856)
++.+.++||+||||+. .. .+-+.+.++|+.| ++.|..++++|+.+
T Consensus 11 ~~~~~~l~D~DGvl~~---g~-~~~p~a~~~l~~l-~~~g~~~~~vTNn~ 55 (352)
T 3kc2_A 11 SKKIAFAFDIDGVLFR---GK-KPIAGASDALKLL-NRNKIPYILLTNGG 55 (352)
T ss_dssp -CCEEEEECCBTTTEE---TT-EECTTHHHHHHHH-HHTTCCEEEECSCC
T ss_pred ccCCEEEEECCCeeEc---CC-eeCcCHHHHHHHH-HHCCCEEEEEeCCC
Confidence 3789999999999997 33 4556788899997 77899999999654
|
| >2fpr_A Histidine biosynthesis bifunctional protein HISB; histidinola phosphate phosphatase, bifunctional enzyme structural genomics; 1.70A {Escherichia coli} SCOP: c.108.1.19 PDB: 2fps_A 2fpu_A* 2fpx_A 2fpw_A* | Back alignment and structure |
|---|
Probab=97.71 E-value=1e-05 Score=79.93 Aligned_cols=51 Identities=20% Similarity=0.294 Sum_probs=38.8
Q ss_pred HcCCcEEEEEecCCCCCCCCC--------CCCCCCHHHHHHHHHHHhhCCCeEEEecCCC
Q 003025 587 LRSKSRAILFDYDGTVMPQTS--------INKAPSQAVISIINTLCNDARNTVFVVSGRG 638 (856)
Q Consensus 587 ~~s~~rlI~~DlDGTLl~~~~--------~~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~ 638 (856)
..+.+|++++|+||||+...+ ....+.+.+.++|++| ++.|++++|+|+.+
T Consensus 10 ~~~~~k~~~~D~Dgtl~~~~~~~~~~~~~~~~~~~pg~~e~L~~L-~~~G~~l~i~Tn~~ 68 (176)
T 2fpr_A 10 HGSSQKYLFIDRDGTLISEPPSDFQVDRFDKLAFEPGVIPQLLKL-QKAGYKLVMITNQD 68 (176)
T ss_dssp ---CCEEEEECSBTTTBCCC--CCCCCSGGGCCBCTTHHHHHHHH-HHTTEEEEEEEECT
T ss_pred cCCcCcEEEEeCCCCeEcCCCCCcCcCCHHHCcCCccHHHHHHHH-HHCCCEEEEEECCc
Confidence 356799999999999987321 1234678999999998 77799999999974
|
| >4fzr_A SSFS6; structural genomics, PSI-biology, protein structure initiati enzyme discovery for natural product biosynthesis, natPro; 2.40A {Streptomyces SP} PDB: 4g2t_A* | Back alignment and structure |
|---|
Probab=97.70 E-value=0.00013 Score=81.20 Aligned_cols=99 Identities=15% Similarity=0.024 Sum_probs=62.6
Q ss_pred EEEcCCCCHHHHHHHHHhcceeeeccccccCCCcccceeeeecCCCCCCCCCCCCCCCCceEEec----CCccccccc--
Q 003025 415 VFIDKPVTLSERAAYYTIAECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVS----EFIGCSPSL-- 488 (856)
Q Consensus 415 v~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~g~lV~S----e~~G~~~~l-- 488 (856)
+.+.+.++. ..++..||+||. .|-+.+..||++|+. |+|+. +-.+.++.+
T Consensus 286 v~~~~~~~~---~~ll~~ad~~v~----~gG~~t~~Ea~~~G~-----------------P~v~~p~~~~q~~~a~~~~~ 341 (398)
T 4fzr_A 286 VLAAGQFPL---SAIMPACDVVVH----HGGHGTTLTCLSEGV-----------------PQVSVPVIAEVWDSARLLHA 341 (398)
T ss_dssp EEEESCCCH---HHHGGGCSEEEE----CCCHHHHHHHHHTTC-----------------CEEECCCSGGGHHHHHHHHH
T ss_pred EEEeCcCCH---HHHHhhCCEEEe----cCCHHHHHHHHHhCC-----------------CEEecCCchhHHHHHHHHHH
Confidence 345566764 556777999994 444568899999955 88884 444555555
Q ss_pred -CCceeeCCC--CHHHHHHHHHHHHcCCHHHHHHHHHHHhhhhhcCCHHHHHH
Q 003025 489 -SGAIRVNPW--NIEATAEAMHEAIQMNEAEKQLRHEKHYRYVSTHDVAYWAR 538 (856)
Q Consensus 489 -~~al~VnP~--d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~ 538 (856)
..|+++++. |.++++++|.++|+.+. .++...+..+++.........++
T Consensus 342 ~g~g~~~~~~~~~~~~l~~ai~~ll~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 393 (398)
T 4fzr_A 342 AGAGVEVPWEQAGVESVLAACARIRDDSS-YVGNARRLAAEMATLPTPADIVR 393 (398)
T ss_dssp TTSEEECC-------CHHHHHHHHHHCTH-HHHHHHHHHHHHTTSCCHHHHHH
T ss_pred cCCEEecCcccCCHHHHHHHHHHHHhCHH-HHHHHHHHHHHHHcCCCHHHHHH
Confidence 237888877 78999999999998653 34444444555556666555544
|
| >2gj4_A Glycogen phosphorylase, muscle form; transferase; HET: PLR 2TH; 1.60A {Oryctolagus cuniculus} SCOP: c.87.1.4 PDB: 2gm9_A* 1abb_A* 3nc4_A* 3l79_A* 2pyd_A* 2pyi_A* 3l7a_A* 3l7b_A* 3l7c_A* 3l7d_A* 2qnb_A* 1c8l_A* 1axr_A* 1gpy_A* 1e1y_A* 1lwo_A* 1pyg_A* 1uzu_A* 1lwn_A* 1xkx_A* ... | Back alignment and structure |
|---|
Probab=97.66 E-value=5.9e-05 Score=89.98 Aligned_cols=151 Identities=13% Similarity=0.093 Sum_probs=102.5
Q ss_pred CCCeEEEeccCccccCCHHHH-HHHHHHHH--HhCCCCcC-ceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCC
Q 003025 334 EGKTVLLGVDDMDIFKGVDLK-LLAMEHLL--KQHPKWQG-RAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRP 409 (856)
Q Consensus 334 ~~k~iil~VdRld~~KGi~~~-l~A~~~ll--~~~p~~~~-~vvLvqi~~p~r~~~~~~~~l~~~~~~lv~~IN~~~~~~ 409 (856)
++..+++.|.|+...||..+. +..+++++ .++|+..- .+++|..|....+. ..-..+.+.+.++++.+|..-.-.
T Consensus 548 pd~l~~g~vkRl~eYKRq~L~~l~~i~~~~~i~~~~~~~~~p~q~If~GKA~P~y-~~aK~iIkli~~va~~in~Dp~v~ 626 (824)
T 2gj4_A 548 PNSLFDVQVKRIHEYKRQLLNCLHVITLYNRIKKEPNKFVVPRTVMIGGKAAPGY-HMAKMIIKLITAIGDVVNHDPVVG 626 (824)
T ss_dssp TTSEEEEEESCCCGGGTHHHHHHHHHHHHHHHHHCTTSCCCCEEEEEECCCCTTC-HHHHHHHHHHHHHHHHHTTCTTTG
T ss_pred CCcceEeeeecchhhcchhhHHHHHHHHHHHHHhCCCCCCCCEEEEEEEeCCHhH-HHHHHHHHHHHHHHHHhccCcccC
Confidence 357899999999999999998 88888886 35665321 35677666544222 222455667888888887643322
Q ss_pred CcccEEEEcCCCCHHHHHHHHHhcceeeeccc--cccCCCcccceeeeecCCCCCCCCCCCCCCCCceEEecCCcccccc
Q 003025 410 GYEPVVFIDKPVTLSERAAYYTIAECVVVTAV--RDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIGCSPS 487 (856)
Q Consensus 410 ~~~pvv~~~~~v~~~el~aly~~ADv~vvtS~--~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~ 487 (856)
+.-.|+++. ..+-.--..+|.+||+++.||. .|.=|+.-+-||.- |.|-+|..-|+..+
T Consensus 627 ~~lKVvFl~-nYdvslA~~I~~gaDv~l~~S~ag~EAsGTs~MKamlN------------------GaLtigtlDGanvE 687 (824)
T 2gj4_A 627 DRLRVIFLE-NYRVSLAEKVIPAADLSEQISTAGTEASGTGNMKFMLN------------------GALTIGTMDGANVE 687 (824)
T ss_dssp GGEEEEEET-TCCHHHHHHHGGGCSEEEECCCTTSCSCCSHHHHHHHT------------------TCEEEECSCTTHHH
T ss_pred CceEEEEEC-CCCHHHHHHHhhhcceeecCCCCCCCCCchHHHHHHHc------------------CceEEEEecCccch
Confidence 333466665 4555556678999999999999 89888888888874 45666666565533
Q ss_pred c------CCceeeCCCCHHHHHHHH
Q 003025 488 L------SGAIRVNPWNIEATAEAM 506 (856)
Q Consensus 488 l------~~al~VnP~d~~~~A~ai 506 (856)
+ .+++++... .+++ +++
T Consensus 688 i~e~vG~~Ngf~FG~~-~~ev-~~l 710 (824)
T 2gj4_A 688 MAEEAGEENFFIFGMR-VEDV-DRL 710 (824)
T ss_dssp HHHHHCGGGSEECSCC-HHHH-HHH
T ss_pred hhhccCCCCEEEeCCc-HHHH-HHH
Confidence 3 237888765 6666 444
|
| >3tsa_A SPNG, NDP-rhamnosyltransferase; glycosyltransferase; HET: GLC; 1.70A {Saccharopolyspora spinosa} PDB: 3uyk_A* 3uyl_A* | Back alignment and structure |
|---|
Probab=97.45 E-value=6.1e-05 Score=83.52 Aligned_cols=154 Identities=13% Similarity=0.059 Sum_probs=99.2
Q ss_pred CCeEEEeccCccccCCH-HHHHHHHHHHHHhCCCCcCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCccc
Q 003025 335 GKTVLLGVDDMDIFKGV-DLKLLAMEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEP 413 (856)
Q Consensus 335 ~k~iil~VdRld~~KGi-~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~~~~lv~~IN~~~~~~~~~p 413 (856)
.+.++++.|++...|+. ...+.++.+. +++|+++ ++.++.+ .+.+.++ +..+
T Consensus 218 ~~~vlv~~G~~~~~~~~~~~~~~~~~~~-~~~p~~~----~v~~~~~-----~~~~~l~-----------------~~~~ 270 (391)
T 3tsa_A 218 ARRVCICMGRMVLNATGPAPLLRAVAAA-TELPGVE----AVIAVPP-----EHRALLT-----------------DLPD 270 (391)
T ss_dssp SEEEEEECCHHHHHHHCSHHHHHHHHHH-HTSTTEE----EEEECCG-----GGGGGCT-----------------TCCT
T ss_pred CCEEEEEcCCCCCcccchHHHHHHHHHh-ccCCCeE----EEEEECC-----cchhhcc-----------------cCCC
Confidence 35678889999887666 8888888888 8887654 5555422 2211111 0112
Q ss_pred EEEEcCCCCHHHHHHHHHhcceeeeccccccCCCcccceeeeecCCCCCCCCCCCCCCCCceEEec----CCccccccc-
Q 003025 414 VVFIDKPVTLSERAAYYTIAECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVS----EFIGCSPSL- 488 (856)
Q Consensus 414 vv~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~g~lV~S----e~~G~~~~l- 488 (856)
-+.+.+.++..++ +..||++|.. |-..+..|+++|+. |+|+. +-.+.++.+
T Consensus 271 ~v~~~~~~~~~~l---l~~ad~~v~~----~G~~t~~Ea~~~G~-----------------P~v~~p~~~~q~~~a~~~~ 326 (391)
T 3tsa_A 271 NARIAESVPLNLF---LRTCELVICA----GGSGTAFTATRLGI-----------------PQLVLPQYFDQFDYARNLA 326 (391)
T ss_dssp TEEECCSCCGGGT---GGGCSEEEEC----CCHHHHHHHHHTTC-----------------CEEECCCSTTHHHHHHHHH
T ss_pred CEEEeccCCHHHH---HhhCCEEEeC----CCHHHHHHHHHhCC-----------------CEEecCCcccHHHHHHHHH
Confidence 2345667776554 4999999953 44467899999955 77774 333444444
Q ss_pred --CCceeeCC----CCHHHHHHHHHHHHcCCHHHHHHHHHHHhhhhhcCCHHHHHHHH
Q 003025 489 --SGAIRVNP----WNIEATAEAMHEAIQMNEAEKQLRHEKHYRYVSTHDVAYWARSF 540 (856)
Q Consensus 489 --~~al~VnP----~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~~ 540 (856)
..|+.+++ .|.++++++|.++|+.+. .++...+...+..........++.+
T Consensus 327 ~~g~g~~~~~~~~~~~~~~l~~ai~~ll~~~~-~~~~~~~~~~~~~~~~~~~~~~~~i 383 (391)
T 3tsa_A 327 AAGAGICLPDEQAQSDHEQFTDSIATVLGDTG-FAAAAIKLSDEITAMPHPAALVRTL 383 (391)
T ss_dssp HTTSEEECCSHHHHTCHHHHHHHHHHHHTCTH-HHHHHHHHHHHHHTSCCHHHHHHHH
T ss_pred HcCCEEecCcccccCCHHHHHHHHHHHHcCHH-HHHHHHHHHHHHHcCCCHHHHHHHH
Confidence 24788888 789999999999998653 3333334445555566666655543
|
| >2i33_A Acid phosphatase; HAD superfamily, hydrolase; 1.57A {Bacillus anthracis} PDB: 2i34_A | Back alignment and structure |
|---|
Probab=97.41 E-value=2.4e-05 Score=82.47 Aligned_cols=55 Identities=20% Similarity=0.261 Sum_probs=44.7
Q ss_pred cCCcEEEEEecCCCCCCCCCCC-------------------------CCCCHHHHHHHHHHHhhCCCeEEEecCCChh--
Q 003025 588 RSKSRAILFDYDGTVMPQTSIN-------------------------KAPSQAVISIINTLCNDARNTVFVVSGRGRD-- 640 (856)
Q Consensus 588 ~s~~rlI~~DlDGTLl~~~~~~-------------------------~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~-- 640 (856)
..++++|+||+||||++ .. ..+.+.+.++|+.| ++.|+.++|+|||+..
T Consensus 56 ~~~~kavifDlDGTLld---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pg~~e~L~~L-~~~Gi~i~iaTnr~~~~~ 131 (258)
T 2i33_A 56 TEKKPAIVLDLDETVLD---NSPHQAMSVKTGKGYPYKWDDWINKAEAEALPGSIDFLKYT-ESKGVDIYYISNRKTNQL 131 (258)
T ss_dssp CSSEEEEEECSBTTTEE---CHHHHHHHHHHSCCTTTTHHHHHHHCCCEECTTHHHHHHHH-HHTTCEEEEEEEEEGGGH
T ss_pred CCCCCEEEEeCcccCcC---CHHHHHHHHhcccchHHHHHHHHHcCCCCcCccHHHHHHHH-HHCCCEEEEEcCCchhHH
Confidence 44689999999999998 42 56778999999997 7889999999999943
Q ss_pred -hHHHhh
Q 003025 641 -CLGKWF 646 (856)
Q Consensus 641 -~l~~~~ 646 (856)
.+...+
T Consensus 132 ~~~~~~L 138 (258)
T 2i33_A 132 DATIKNL 138 (258)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 444444
|
| >2iyf_A OLED, oleandomycin glycosyltransferase; antibiotic resistance, glycosylation, enzyme, macrolide, carbohydrate; HET: ERY UDP; 1.7A {Streptomyces antibioticus} | Back alignment and structure |
|---|
Probab=97.40 E-value=0.00024 Score=79.85 Aligned_cols=102 Identities=12% Similarity=-0.048 Sum_probs=68.3
Q ss_pred EEEcCCCCHHHHHHHHHhcceeeeccccccCCCcccceeeeecCCCCCCCCCCCCCCCCceEEecCCcc----ccccc--
Q 003025 415 VFIDKPVTLSERAAYYTIAECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIG----CSPSL-- 488 (856)
Q Consensus 415 v~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~g~lV~Se~~G----~~~~l-- 488 (856)
+.+.+.+++. .+|+.||+||..+ |. .+.+|||+|+. |+|++...| .++.+
T Consensus 285 v~~~~~~~~~---~~l~~ad~~v~~~---G~-~t~~Ea~~~G~-----------------P~i~~p~~~~q~~~a~~~~~ 340 (430)
T 2iyf_A 285 VEVHDWVPQL---AILRQADLFVTHA---GA-GGSQEGLATAT-----------------PMIAVPQAVDQFGNADMLQG 340 (430)
T ss_dssp EEEESSCCHH---HHHTTCSEEEECC---CH-HHHHHHHHTTC-----------------CEEECCCSHHHHHHHHHHHH
T ss_pred eEEEecCCHH---HHhhccCEEEECC---Cc-cHHHHHHHhCC-----------------CEEECCCccchHHHHHHHHH
Confidence 3455677765 6899999988754 43 68999999955 888887655 23334
Q ss_pred -CCceeeCCC--CHHHHHHHHHHHHcCCHHHHHHHHHHHhhhhhcCCHHHHHHHHH
Q 003025 489 -SGAIRVNPW--NIEATAEAMHEAIQMNEAEKQLRHEKHYRYVSTHDVAYWARSFF 541 (856)
Q Consensus 489 -~~al~VnP~--d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~~l 541 (856)
..|+.+++. |.++++++|.++|+. ++.++...+..++....+.....++.+.
T Consensus 341 ~g~g~~~~~~~~~~~~l~~~i~~ll~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 395 (430)
T 2iyf_A 341 LGVARKLATEEATADLLRETALALVDD-PEVARRLRRIQAEMAQEGGTRRAADLIE 395 (430)
T ss_dssp TTSEEECCCC-CCHHHHHHHHHHHHHC-HHHHHHHHHHHHHHHHHCHHHHHHHHHH
T ss_pred cCCEEEcCCCCCCHHHHHHHHHHHHcC-HHHHHHHHHHHHHHHhcCcHHHHHHHHH
Confidence 347888877 889999999999984 3444333333444444455555554443
|
| >2zxe_A Na, K-ATPase alpha subunit; membrane protein, ION pump, ATPase, K+ binding, haloacid dehydrogenease superfamily, phosphate analogue; HET: CLR NAG NDG; 2.40A {Squalus acanthias} PDB: 3a3y_A* 3b8e_A* 3kdp_A* 3n2f_A* 3n23_A* 1mo7_A 1mo8_A* 1q3i_A | Back alignment and structure |
|---|
Probab=97.29 E-value=0.00026 Score=88.77 Aligned_cols=163 Identities=22% Similarity=0.233 Sum_probs=91.9
Q ss_pred CCCCHHHHHHHHHHHhhCCCeEEEecCCChhhHHHhhcCCCCccEEeeCCEEEEeCCCcceEecCCCCcccHHHHHHHHH
Q 003025 610 KAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSPCKKLGIAAEHGYFMRWSADEEWQNCGQSVDFGWIQIAEPVM 689 (856)
Q Consensus 610 ~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~~~~lgliaenG~~I~~~~~~~w~~~~~~~~~~w~~~v~~i~ 689 (856)
.++.+++.++|++| ++.|++|+++||+....+..+... +|+..++|..+. +...
T Consensus 598 Dplr~~~~~aI~~l-~~aGI~v~miTGD~~~tA~~ia~~---lgi~~~~~~~i~-------------------~~~~--- 651 (1028)
T 2zxe_A 598 DPPRAAVPDAVGKC-RSAGIKVIMVTGDHPITAKAIAKG---VGIISEGNETIE-------------------DIAA--- 651 (1028)
T ss_dssp CCBCTTHHHHHHHH-HHTTCEEEEECSSCHHHHHHHHHH---HTSSCTTCCCHH-------------------HHHH---
T ss_pred CCCChhHHHHHHHH-HHcCCEEEEECCCCHHHHHHHHHH---cCCCCCCchhHH-------------------HHHh---
Confidence 35678999999996 889999999999999999888854 455443332110 0000
Q ss_pred HHHhhcCCcceEEe-cccceEEeeecCCCCCCchhHHHHHHHHHHHhcCCCeEEEEcCeEEEEEeCCCCHHHHHHHHHHH
Q 003025 690 KLYTESTDGSYIEI-KESALVWHHRDADPGFGSSQAKELLDHLESVLANEPAAVKSGQFIVEVKPQGVSKGVVAEKIFTT 768 (856)
Q Consensus 690 ~~~~~~~~Gs~ie~-k~~~l~~~~~~~dp~~~~~~a~el~~~L~~~l~~~~~~v~~g~~~vEI~p~gvsKG~al~~Ll~~ 768 (856)
.. ..+-..... ........-...+ .. ..+++.+ .+......+ +..+.|. .|...++.+.+.
T Consensus 652 -~~--~~~~~~~~~~~~~~~vi~G~~l~-~~---~~~~l~~----~~~~~~~~v-----~ar~~P~--~K~~iV~~lq~~ 713 (1028)
T 2zxe_A 652 -RL--NIPIGQVNPRDAKACVVHGSDLK-DL---STEVLDD----ILHYHTEIV-----FARTSPQ--QKLIIVEGCQRQ 713 (1028)
T ss_dssp -HT--TCCGGGSCGGGCCEEEEEHHHHT-TC---CHHHHHH----HHHHCSEEE-----EESCCHH--HHHHHHHHHHHT
T ss_pred -hc--CcchhhccccccceEEEEcHHhh-hC---CHHHHHH----HHhhCCcEE-----EEEcCHH--HHHHHHHHHHhC
Confidence 00 000000000 0001111100000 00 1122222 222211111 2223343 699999988663
Q ss_pred hhhcCCCcceEEEEeCCchhHHHHHHccccccCCCCCCCccEEEEEeC-CC----ccccceEcC--ChhHHHHHHH
Q 003025 769 MAESGRHADFVLCIGDDRSDEDMFEIIGNATSSGVLSSNASVFACTVG-QK----PSKAKYYLD--DAAEVVTMLE 837 (856)
Q Consensus 769 l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG-~~----~s~A~y~l~--~~~eV~~~L~ 837 (856)
| ..|+++||+.||.+||+.|+. +|++| +. +..|++++. +.+.+.++++
T Consensus 714 ----g---~~V~~iGDG~ND~paLk~Adv--------------GIAmg~~gtd~ak~aAD~Vl~~~~~~~I~~~i~ 768 (1028)
T 2zxe_A 714 ----G---AIVAVTGDGVNDSPALKKADI--------------GVAMGISGSDVSKQAADMILLDDNFASIVTGVE 768 (1028)
T ss_dssp ----T---CCEEEEECSGGGHHHHHHSSE--------------EEEESSSCCHHHHHHCSEEETTCCTHHHHHHHH
T ss_pred ----C---CEEEEEcCCcchHHHHHhCCc--------------eEEeCCccCHHHHHhcCEEecCCCHHHHHHHHH
Confidence 3 569999999999999999984 68888 34 457889874 4677777664
|
| >3ar4_A Sarcoplasmic/endoplasmic reticulum calcium ATPase; P-type ATPase, hydrolase, calcium transport, calcium binding binding; HET: ATP TG1 PTY; 2.15A {Oryctolagus cuniculus} PDB: 2ear_A* 2eas_A* 2eat_A* 2eau_A* 2dqs_A* 2zbe_A 2zbf_A* 2zbg_A* 3ar2_A* 2zbd_A* 3ar3_A* 3ar5_A* 3ar6_A* 3ar7_A* 3ar8_A* 3ar9_A* 3n5k_A* 1kju_A 1iwo_A 1t5s_A* ... | Back alignment and structure |
|---|
Probab=97.12 E-value=0.00072 Score=84.54 Aligned_cols=142 Identities=18% Similarity=0.244 Sum_probs=89.8
Q ss_pred CCCCHHHHHHHHHHHhhCCCeEEEecCCChhhHHHhhcCCCCccEEeeCCEEEEeCCCcceEecCCCCcccHHHHHHHHH
Q 003025 610 KAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSPCKKLGIAAEHGYFMRWSADEEWQNCGQSVDFGWIQIAEPVM 689 (856)
Q Consensus 610 ~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~~~~lgliaenG~~I~~~~~~~w~~~~~~~~~~w~~~v~~i~ 689 (856)
.++.+++.+++++| ++.|++++++||+........... +|+...+.. + .
T Consensus 602 D~lr~~~~~~I~~l-~~~Gi~v~miTGD~~~ta~~ia~~---lgi~~~~~~-i------------~-------------- 650 (995)
T 3ar4_A 602 DPPRKEVMGSIQLC-RDAGIRVIMITGDNKGTAIAICRR---IGIFGENEE-V------------A-------------- 650 (995)
T ss_dssp CCBCTTHHHHHHHH-HHTTCEEEEEESSCHHHHHHHHHH---HTSSCTTCC-C------------T--------------
T ss_pred CCCchhHHHHHHHH-HHcCCEEEEECCCCHHHHHHHHHH---cCcCCCCCc-c------------c--------------
Confidence 35667899999996 889999999999999999888743 344322110 0 0
Q ss_pred HHHhhcCCcceEEecccceEEeeecCCCCCCchhHHHHHHHHHHHhcCCCeEEEEcCeEEEEEeCCCCHHHHHHHHHHHh
Q 003025 690 KLYTESTDGSYIEIKESALVWHHRDADPGFGSSQAKELLDHLESVLANEPAAVKSGQFIVEVKPQGVSKGVVAEKIFTTM 769 (856)
Q Consensus 690 ~~~~~~~~Gs~ie~k~~~l~~~~~~~dp~~~~~~a~el~~~L~~~l~~~~~~v~~g~~~vEI~p~gvsKG~al~~Ll~~l 769 (856)
+..+..++ +...+ .+++.+.+. + ...+.++.|. +|..+++.+.++
T Consensus 651 --------~~~~~g~~------~~~l~-------~~~~~~~~~----~-------~~v~~r~~P~--~K~~~v~~l~~~- 695 (995)
T 3ar4_A 651 --------DRAYTGRE------FDDLP-------LAEQREACR----R-------ACCFARVEPS--HKSKIVEYLQSY- 695 (995)
T ss_dssp --------TTEEEHHH------HHTSC-------HHHHHHHHH----H-------CCEEESCCSS--HHHHHHHHHHTT-
T ss_pred --------ceEEEchh------hhhCC-------HHHHHHHHh----h-------CcEEEEeCHH--HHHHHHHHHHHC-
Confidence 00000000 00000 112222221 1 1234455565 799999998653
Q ss_pred hhcCCCcceEEEEeCCchhHHHHHHccccccCCCCCCCccEEEEEeCCC----ccccceEc--CChhHHHHHHH
Q 003025 770 AESGRHADFVLCIGDDRSDEDMFEIIGNATSSGVLSSNASVFACTVGQK----PSKAKYYL--DDAAEVVTMLE 837 (856)
Q Consensus 770 ~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~----~s~A~y~l--~~~~eV~~~L~ 837 (856)
| +.|+++||+.||.+||+.|+. ++++|+. +..|++++ ++...+.++++
T Consensus 696 ---g---~~v~~~GDG~ND~~alk~Adv--------------giamg~g~~~ak~aAd~vl~~~~~~~i~~~i~ 749 (995)
T 3ar4_A 696 ---D---EITAMTGDGVNDAPALKKAEI--------------GIAMGSGTAVAKTASEMVLADDNFSTIVAAVE 749 (995)
T ss_dssp ---T---CCEEEEECSGGGHHHHHHSTE--------------EEEETTSCHHHHHTCSEEETTCCHHHHHHHHH
T ss_pred ---C---CEEEEEcCCchhHHHHHHCCe--------------EEEeCCCCHHHHHhCCEEECCCCHHHHHHHHH
Confidence 2 689999999999999999984 6888854 45688988 45677776653
|
| >2yj3_A Copper-transporting ATPase; hydrolase, P-type ATPase, COPB, heavy metal translocation; 2.20A {Sulfolobus solfataricus} PDB: 2iye_A 2yj6_A* 2yj5_A* 2yj4_A* | Back alignment and structure |
|---|
Probab=96.18 E-value=7.3e-05 Score=78.83 Aligned_cols=52 Identities=15% Similarity=0.283 Sum_probs=37.5
Q ss_pred EEEecCCCCCCCCCCCCCCCHHHHHHHHHHHhhCCCeEEEecCCChhhHHHhh
Q 003025 594 ILFDYDGTVMPQTSINKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWF 646 (856)
Q Consensus 594 I~~DlDGTLl~~~~~~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~ 646 (856)
++..+|+.+...-.....+-+.+.++|++| ++.|+.++++||.+...+...+
T Consensus 119 ~~~~~~~~~~~~~~~~~~~~~g~~~~l~~L-~~~g~~~~i~T~~~~~~~~~~~ 170 (263)
T 2yj3_A 119 IAVYINGEPIASFNISDVPRPNLKDYLEKL-KNEGLKIIILSGDKEDKVKELS 170 (263)
Confidence 555566655531112345678888999997 7789999999999888877766
|
| >2o6l_A UDP-glucuronosyltransferase 2B7; drug metabolism, rossman, MAD, enzyme, nucleotide binding, sugar,UDP-glucuronosyltransferase, UGT; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.02 E-value=0.00066 Score=65.99 Aligned_cols=122 Identities=14% Similarity=0.113 Sum_probs=81.5
Q ss_pred CCeEEEeccCcc---ccCCHHHHHHHHHHHHHhCCCCcCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCc
Q 003025 335 GKTVLLGVDDMD---IFKGVDLKLLAMEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGY 411 (856)
Q Consensus 335 ~k~iil~VdRld---~~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~~~~lv~~IN~~~~~~~~ 411 (856)
...+++++|++. +.|++...++|++++ + + .++.++.+.. .+ ..
T Consensus 21 ~~~vlv~~Gs~~~~~~~~~~~~~~~al~~~----~-~----~~~~~~g~~~---~~-----------------~~----- 66 (170)
T 2o6l_A 21 NGVVVFSLGSMVSNMTEERANVIASALAQI----P-Q----KVLWRFDGNK---PD-----------------TL----- 66 (170)
T ss_dssp TCEEEEECCSCCTTCCHHHHHHHHHHHTTS----S-S----EEEEECCSSC---CT-----------------TC-----
T ss_pred CCEEEEECCCCcccCCHHHHHHHHHHHHhC----C-C----eEEEEECCcC---cc-----------------cC-----
Confidence 467899999995 677888888887532 2 2 2444432211 00 01
Q ss_pred ccEEEEcCCCCHHHHHHHHHhcceeeeccccccCCCcccceeeeecCCCCCCCCCCCCCCCCceEEecCCcc----cccc
Q 003025 412 EPVVFIDKPVTLSERAAYYTIAECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIG----CSPS 487 (856)
Q Consensus 412 ~pvv~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~g~lV~Se~~G----~~~~ 487 (856)
.+-+.+.+.+++.++.++ ..||++|.. -| +.+..|+++|+. |+|+..+.+ .++.
T Consensus 67 ~~~v~~~~~~~~~~~l~~-~~ad~~I~~---~G-~~t~~Ea~~~G~-----------------P~i~~p~~~~Q~~na~~ 124 (170)
T 2o6l_A 67 GLNTRLYKWIPQNDLLGH-PKTRAFITH---GG-ANGIYEAIYHGI-----------------PMVGIPLFADQPDNIAH 124 (170)
T ss_dssp CTTEEEESSCCHHHHHTS-TTEEEEEEC---CC-HHHHHHHHHHTC-----------------CEEECCCSTTHHHHHHH
T ss_pred CCcEEEecCCCHHHHhcC-CCcCEEEEc---CC-ccHHHHHHHcCC-----------------CEEeccchhhHHHHHHH
Confidence 112345678888777654 999999963 34 489999999955 888887642 2333
Q ss_pred c---CCceeeCCC--CHHHHHHHHHHHHcC
Q 003025 488 L---SGAIRVNPW--NIEATAEAMHEAIQM 512 (856)
Q Consensus 488 l---~~al~VnP~--d~~~~A~ai~~aL~m 512 (856)
+ ..|+.+++. +.++++++|.++|+.
T Consensus 125 l~~~g~g~~~~~~~~~~~~l~~~i~~ll~~ 154 (170)
T 2o6l_A 125 MKARGAAVRVDFNTMSSTDLLNALKRVIND 154 (170)
T ss_dssp HHTTTSEEECCTTTCCHHHHHHHHHHHHHC
T ss_pred HHHcCCeEEeccccCCHHHHHHHHHHHHcC
Confidence 4 237888876 789999999999974
|
| >2p6p_A Glycosyl transferase; X-RAY-diffraction,urdamycina-biosynthesis; 1.88A {Streptomyces fradiae} | Back alignment and structure |
|---|
Probab=96.98 E-value=0.0047 Score=68.03 Aligned_cols=137 Identities=15% Similarity=0.030 Sum_probs=84.8
Q ss_pred CeEEEeccCcccc-------CCHHHHHHHHHHHHHhCCCCcCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCC
Q 003025 336 KTVLLGVDDMDIF-------KGVDLKLLAMEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGR 408 (856)
Q Consensus 336 k~iil~VdRld~~-------KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~~~~lv~~IN~~~~~ 408 (856)
..+++++|++... +.+...++|++++ ++ .++.++. +++.+ ++.. +..
T Consensus 211 ~~v~v~~Gs~~~~~~~~~~~~~~~~~~~al~~~-----~~----~~~~~~g-----~~~~~----~l~~----~~~---- 264 (384)
T 2p6p_A 211 QRVLVTSGSRVAKESYDRNFDFLRGLAKDLVRW-----DV----ELIVAAP-----DTVAE----ALRA----EVP---- 264 (384)
T ss_dssp CEEEEECSSSSSCCSSCCCCTTHHHHHHHHHTT-----TC----EEEEECC-----HHHHH----HHHH----HCT----
T ss_pred CEEEEECCCCCccccccccHHHHHHHHHHHhcC-----Cc----EEEEEeC-----CCCHH----hhCC----CCC----
Confidence 5688999999875 5677777777542 22 2443331 12222 2221 110
Q ss_pred CCcccEEEEcCCCCHHHHHHHHHhcceeeeccccccCCCcccceeeeecCCCCCCCCCCCCCCCCceEEecCCcc----c
Q 003025 409 PGYEPVVFIDKPVTLSERAAYYTIAECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIG----C 484 (856)
Q Consensus 409 ~~~~pvv~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~g~lV~Se~~G----~ 484 (856)
.+ .+ +.+++.+ +|..||+||..+ | ..+..|+++|+. |+|+....+ .
T Consensus 265 ----~v-~~-~~~~~~~---~l~~~d~~v~~~---G-~~t~~Ea~~~G~-----------------P~v~~p~~~dq~~~ 314 (384)
T 2p6p_A 265 ----QA-RV-GWTPLDV---VAPTCDLLVHHA---G-GVSTLTGLSAGV-----------------PQLLIPKGSVLEAP 314 (384)
T ss_dssp ----TS-EE-ECCCHHH---HGGGCSEEEECS---C-TTHHHHHHHTTC-----------------CEEECCCSHHHHHH
T ss_pred ----ce-EE-cCCCHHH---HHhhCCEEEeCC---c-HHHHHHHHHhCC-----------------CEEEccCcccchHH
Confidence 13 34 6777654 678999999753 4 457899999955 888887643 3
Q ss_pred cccc---CCceeeCCC--CHHHHHHHHHHHHcCCHHHHHHHHHHHhhhhhc
Q 003025 485 SPSL---SGAIRVNPW--NIEATAEAMHEAIQMNEAEKQLRHEKHYRYVST 530 (856)
Q Consensus 485 ~~~l---~~al~VnP~--d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~ 530 (856)
++.+ ..|+.+++. +.++++++|.++|+.+ + .+.++.+..+.+..
T Consensus 315 a~~~~~~g~g~~~~~~~~~~~~l~~~i~~ll~~~-~-~~~~~~~~~~~~~~ 363 (384)
T 2p6p_A 315 ARRVADYGAAIALLPGEDSTEAIADSCQELQAKD-T-YARRAQDLSREISG 363 (384)
T ss_dssp HHHHHHHTSEEECCTTCCCHHHHHHHHHHHHHCH-H-HHHHHHHHHHHHHT
T ss_pred HHHHHHCCCeEecCcCCCCHHHHHHHHHHHHcCH-H-HHHHHHHHHHHHHh
Confidence 3334 237888775 7899999999999843 3 33344444444433
|
| >3zvl_A Bifunctional polynucleotide phosphatase/kinase; hydrolase-transferase complex, base excision repair, BER, non-homologous END-joining, NHEJ; 1.65A {Mus musculus} PDB: 3zvm_A* 3zvn_A* 1yj5_A 3u7e_B* 3u7f_B* 3u7h_B* 3u7g_A* | Back alignment and structure |
|---|
Probab=96.93 E-value=0.00078 Score=75.90 Aligned_cols=49 Identities=14% Similarity=0.262 Sum_probs=38.7
Q ss_pred CCcEEEEEecCCCCCCCCCC--------C-CCCCHHHHHHHHHHHhhCCCeEEEecCCC
Q 003025 589 SKSRAILFDYDGTVMPQTSI--------N-KAPSQAVISIINTLCNDARNTVFVVSGRG 638 (856)
Q Consensus 589 s~~rlI~~DlDGTLl~~~~~--------~-~~~s~~~~~aL~~L~~d~g~~V~I~TGR~ 638 (856)
.++|+++||+||||+...+. + ..+.+.+.++|+.| ++.|+.++|+|+++
T Consensus 56 ~~~k~v~fD~DGTL~~~~~~~~~~~~~~~~~~~~pgv~e~L~~L-~~~G~~l~IvTN~~ 113 (416)
T 3zvl_A 56 PQGKVAAFDLDGTLITTRSGKVFPTSPSDWRILYPEIPKKLQEL-AAEGYKLVIFTNQM 113 (416)
T ss_dssp CCSSEEEECSBTTTEECSSCSSSCSSTTCCEESCTTHHHHHHHH-HHTTCEEEEEEECH
T ss_pred CCCeEEEEeCCCCccccCCCccCCCCHHHhhhhcccHHHHHHHH-HHCCCeEEEEeCCc
Confidence 46899999999999863210 0 12568899999998 78899999999976
|
| >1mhs_A Proton pump, plasma membrane ATPase; ION transport, membrane protein, P-type ATPase, active transport, cryo-electron microscopy; 8.00A {Neurospora crassa} SCOP: i.18.1.1 | Back alignment and structure |
|---|
Probab=96.86 E-value=0.0018 Score=79.60 Aligned_cols=166 Identities=14% Similarity=0.159 Sum_probs=102.5
Q ss_pred HHHHHcCCcEEEEEecCC-----CCCCCCCCCCCCCHHHHHHHHHHHhhCCCeEEEecCCChhhHHHhhcCCCCccEEee
Q 003025 583 VSAYLRSKSRAILFDYDG-----TVMPQTSINKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSPCKKLGIAAE 657 (856)
Q Consensus 583 ~~~y~~s~~rlI~~DlDG-----TLl~~~~~~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~~~~lgliae 657 (856)
...|.....|.+++=++. +++..-....++-+++.+++++| ++.|+.|+++||........+... +|+...
T Consensus 502 ~~~~a~~G~RvL~vA~~~~e~~l~~lGli~i~Dp~R~ea~~aI~~l-~~aGI~v~MiTGD~~~TA~aIA~~---lGI~~~ 577 (920)
T 1mhs_A 502 VAEFATRGFRSLGVARKRGEGSWEILGIMPCMDPPRHDTYKTVCEA-KTLGLSIKMLTGDAVGIARETSRQ---LGLGTN 577 (920)
T ss_dssp HHHHHTSSCCCCEECCCSSSCSCCCCBBCCCCCCCCHHHHHHHHHH-HHHTCEEEEEESSCHHHHHHHHHH---HTSSCS
T ss_pred HHHHHhCCCEEEEEEEeccccccEEEEEEEEeccccccHHHHHHHH-hhcCceEEEEcCCCHHHHHHHHHH---cCCCcc
Confidence 344555556777665543 55542224567889999999995 889999999999999999888854 333210
Q ss_pred CCEEEEeCCCcceEecCCCCcccHHHHHHHHHHHHhhcCCcceEEecccceEEeeecCCCCCCchhHHHHHHHHHHHhcC
Q 003025 658 HGYFMRWSADEEWQNCGQSVDFGWIQIAEPVMKLYTESTDGSYIEIKESALVWHHRDADPGFGSSQAKELLDHLESVLAN 737 (856)
Q Consensus 658 nG~~I~~~~~~~w~~~~~~~~~~w~~~v~~i~~~~~~~~~Gs~ie~k~~~l~~~~~~~dp~~~~~~a~el~~~L~~~l~~ 737 (856)
+. ..+. . ...|. . . -.+.+ + .+.+.+
T Consensus 578 ----~~-~~~~----~---------------------~~~g~---~-~--------~~~~e--------l----~~~~~~ 603 (920)
T 1mhs_A 578 ----IY-NAER----L---------------------GLGGG---G-D--------MPGSE--------V----YDFVEA 603 (920)
T ss_dssp ----CC-CSSS----S---------------------SSCBC---C-C--------GGGGG--------G----GTTTTT
T ss_pred ----cc-Cccc----e---------------------eecCc---c-c--------CCHHH--------H----HHHHhh
Confidence 00 0000 0 00010 0 0 00011 1 111111
Q ss_pred CCeEEEEcCeEEEEEeCCCCHHHHHHHHHHHhhhcCCCcceEEEEeCCchhHHHHHHccccccCCCCCCCccEEEEEeCC
Q 003025 738 EPAAVKSGQFIVEVKPQGVSKGVVAEKIFTTMAESGRHADFVLCIGDDRSDEDMFEIIGNATSSGVLSSNASVFACTVGQ 817 (856)
Q Consensus 738 ~~~~v~~g~~~vEI~p~gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~ 817 (856)
...+-++.|. +|...++.+.++ | +.|+++||+.||.+||+.++. +|++|+
T Consensus 604 -------~~V~arv~P~--~K~~iV~~Lq~~----g---~~Vam~GDGvNDapaLk~Adv--------------GIAmg~ 653 (920)
T 1mhs_A 604 -------ADGFAEVFPQ--HKYNVVEILQQR----G---YLVAMTGDGVNDAPSLKKADT--------------GIAVEG 653 (920)
T ss_dssp -------TSCEESCCST--HHHHHHHHHHTT----T---CCCEECCCCGGGHHHHHHSSE--------------EEEETT
T ss_pred -------CeEEEEeCHH--HHHHHHHHHHhC----C---CeEEEEcCCcccHHHHHhCCc--------------Cccccc
Confidence 1224456665 799999998653 3 679999999999999999984 688886
Q ss_pred C----ccccceEcC--ChhHHHHHH
Q 003025 818 K----PSKAKYYLD--DAAEVVTML 836 (856)
Q Consensus 818 ~----~s~A~y~l~--~~~eV~~~L 836 (856)
. +..|++++. +...+.+.+
T Consensus 654 gtd~ak~aADiVl~~~~~~~I~~ai 678 (920)
T 1mhs_A 654 SSDAARSAADIVFLAPGLGAIIDAL 678 (920)
T ss_dssp SCHHHHHSSSEEESSCCSHHHHHHH
T ss_pred ccHHHHHhcCeEEcCCCHHHHHHHH
Confidence 4 457888873 455555544
|
| >3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=96.79 E-value=0.0038 Score=68.82 Aligned_cols=149 Identities=15% Similarity=0.079 Sum_probs=82.5
Q ss_pred CeEEEeccCccccCCHHHHHHHHHHHHHhCCCCcCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCcccEE
Q 003025 336 KTVLLGVDDMDIFKGVDLKLLAMEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVV 415 (856)
Q Consensus 336 k~iil~VdRld~~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~~~~lv~~IN~~~~~~~~~pvv 415 (856)
..+++..|++...+.-....+|++++ +.-. ++.++.++.. .+++.+++.. ...+.. +.
T Consensus 181 ~~ilv~gGs~g~~~~~~~~~~al~~l----~~~~-~~~vi~~~G~-----~~~~~~~~~~----~~~~~~--------~~ 238 (365)
T 3s2u_A 181 VNLLVLGGSLGAEPLNKLLPEALAQV----PLEI-RPAIRHQAGR-----QHAEITAERY----RTVAVE--------AD 238 (365)
T ss_dssp CEEEECCTTTTCSHHHHHHHHHHHTS----CTTT-CCEEEEECCT-----TTHHHHHHHH----HHTTCC--------CE
T ss_pred cEEEEECCcCCccccchhhHHHHHhc----cccc-ceEEEEecCc-----ccccccccee----cccccc--------cc
Confidence 45666667776665555555565544 3222 2334444321 1233333332 222211 22
Q ss_pred EEcCCCCHHHHHHHHHhcceeeeccccccCCCcccceeeeecCCCCCCCCCCCCCCCCceEEecCCcccc--------cc
Q 003025 416 FIDKPVTLSERAAYYTIAECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIGCS--------PS 487 (856)
Q Consensus 416 ~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~--------~~ 487 (856)
+.+++ +++..+|+.||++|..| | +.+..|+++|+. |.|+.-+.+.. +.
T Consensus 239 -v~~f~--~dm~~~l~~aDlvI~ra---G-~~Tv~E~~a~G~-----------------P~Ilip~p~~~~~~Q~~NA~~ 294 (365)
T 3s2u_A 239 -VAPFI--SDMAAAYAWADLVICRA---G-ALTVSELTAAGL-----------------PAFLVPLPHAIDDHQTRNAEF 294 (365)
T ss_dssp -EESCC--SCHHHHHHHCSEEEECC---C-HHHHHHHHHHTC-----------------CEEECC-----CCHHHHHHHH
T ss_pred -cccch--hhhhhhhccceEEEecC---C-cchHHHHHHhCC-----------------CeEEeccCCCCCcHHHHHHHH
Confidence 22333 46889999999988543 5 577889999965 77776655432 22
Q ss_pred c---CCceeeCCC--CHHHHHHHHHHHHcCCHHHHHHHHHHHhhhhhcC
Q 003025 488 L---SGAIRVNPW--NIEATAEAMHEAIQMNEAEKQLRHEKHYRYVSTH 531 (856)
Q Consensus 488 l---~~al~VnP~--d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~ 531 (856)
+ ..|++++.. +.++++++|.++|+.++ .++.+.++.++....+
T Consensus 295 l~~~G~a~~l~~~~~~~~~L~~~i~~ll~d~~-~~~~m~~~a~~~~~~~ 342 (365)
T 3s2u_A 295 LVRSGAGRLLPQKSTGAAELAAQLSEVLMHPE-TLRSMADQARSLAKPE 342 (365)
T ss_dssp HHTTTSEEECCTTTCCHHHHHHHHHHHHHCTH-HHHHHHHHHHHTCCTT
T ss_pred HHHCCCEEEeecCCCCHHHHHHHHHHHHCCHH-HHHHHHHHHHhcCCcc
Confidence 3 236777655 47999999999998653 3344444445444333
|
| >2b82_A APHA, class B acid phosphatase; DDDD acid phosphatase, metallo-ENZ hydrolase; HET: ADN; 1.25A {Escherichia coli} SCOP: c.108.1.12 PDB: 2b8j_A* 2hf7_A 1rmt_A* 1n9k_A 1rmq_A 1n8n_A* 1rmy_A* 2g1a_A* 3cz4_A 2heg_A* 1z5g_A 1z5u_A* 1z88_A 2aut_A | Back alignment and structure |
|---|
Probab=96.73 E-value=0.00062 Score=69.21 Aligned_cols=63 Identities=22% Similarity=0.322 Sum_probs=40.8
Q ss_pred CCHHHHHHHHHcCCcEEEEEecCCCCCCCCCC-------------------------------CCCCCHHHHHHHHHHHh
Q 003025 577 LSIDAIVSAYLRSKSRAILFDYDGTVMPQTSI-------------------------------NKAPSQAVISIINTLCN 625 (856)
Q Consensus 577 l~~~~i~~~y~~s~~rlI~~DlDGTLl~~~~~-------------------------------~~~~s~~~~~aL~~L~~ 625 (856)
.+++++.......++|+|+||+||||++.... ...+.+.+.++|+.| +
T Consensus 23 ~~~~~i~~~~~~~~~kaviFDlDGTL~Ds~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~L-~ 101 (211)
T 2b82_A 23 VSVAQIENSLAGRPPMAVGFDIDDTVLFSSPGFWRGKKTFSPESEDYLKNPVFWEKMNNGWDEFSIPKEVARQLIDMH-V 101 (211)
T ss_dssp ECHHHHHHHTTTCCCCEEEECCBTTTEECHHHHHHHHHHHCTTSSGGGGCHHHHHHHHTTGGGGCEECHHHHHHHHHH-H
T ss_pred eeHhhHhhhcccCCCCEEEEcCCCCCCcCcHHHHHHHHHhhHHHHHHhhhHHHHHHHHHhHHhcCCCcHHHHHHHHHH-H
Confidence 34555554333446899999999999982110 001234667777776 6
Q ss_pred hCCCeEEEecCCChh
Q 003025 626 DARNTVFVVSGRGRD 640 (856)
Q Consensus 626 d~g~~V~I~TGR~~~ 640 (856)
+.|++++|+|+++..
T Consensus 102 ~~G~~l~ivTn~~~~ 116 (211)
T 2b82_A 102 RRGDAIFFVTGRSPT 116 (211)
T ss_dssp HHTCEEEEEECSCCC
T ss_pred HCCCEEEEEcCCcHH
Confidence 668888888888643
|
| >3i28_A Epoxide hydrolase 2; aromatic hydrocarbons catabolism, detoxification, magnesium, metal-binding, peroxisome; HET: 34N; 1.95A {Homo sapiens} PDB: 1s8o_A* 1zd2_P* 1vj5_A* 1zd4_A* 1zd5_A* 3i1y_A* 1zd3_A* 3koo_A* 3otq_A* 4hai_A* 1cqz_A 1cr6_A* 1ek1_A* 1ek2_A* 3ans_A* 3ant_A* 3pdc_A* | Back alignment and structure |
|---|
Probab=96.73 E-value=0.00093 Score=76.56 Aligned_cols=38 Identities=11% Similarity=0.085 Sum_probs=34.1
Q ss_pred HHHHHHHHHHHhhhcCCCcceEEEEeCCchhHHHHHHcccc
Q 003025 758 KGVVAEKIFTTMAESGRHADFVLCIGDDRSDEDMFEIIGNA 798 (856)
Q Consensus 758 KG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~ 798 (856)
+....+.+++++ |++++++++|||+.+|+.+.+.+|..
T Consensus 162 ~p~~~~~~~~~l---g~~p~~~~~v~D~~~di~~a~~aG~~ 199 (555)
T 3i28_A 162 EPQIYKFLLDTL---KASPSEVVFLDDIGANLKPARDLGMV 199 (555)
T ss_dssp CHHHHHHHHHHH---TCCGGGEEEEESCHHHHHHHHHHTCE
T ss_pred CHHHHHHHHHHc---CCChhHEEEECCcHHHHHHHHHcCCE
Confidence 355778889999 99999999999999999999999974
|
| >3b8c_A ATPase 2, plasma membrane-type; P-type ATPase, proton pump, ATP-binding, hydrogen ION transport, hydrolase, ION transport; HET: ACP; 3.60A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=96.39 E-value=0.002 Score=79.08 Aligned_cols=171 Identities=13% Similarity=0.140 Sum_probs=104.3
Q ss_pred HHHHHHHHHcCCcEEEEEecC-------------CCCCCCCCCCCCCCHHHHHHHHHHHhhCCCeEEEecCCChhhHHHh
Q 003025 579 IDAIVSAYLRSKSRAILFDYD-------------GTVMPQTSINKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKW 645 (856)
Q Consensus 579 ~~~i~~~y~~s~~rlI~~DlD-------------GTLl~~~~~~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~ 645 (856)
+....+.|.....|.+++=++ .+++..-....++-+++.+++++| ++.|+.|+++||.........
T Consensus 443 ~~~~~~~~a~~G~rvl~vA~~~~~~~~~~~~e~~l~~lGli~i~Dp~R~~a~~aI~~l-~~aGI~v~MiTGD~~~tA~~i 521 (885)
T 3b8c_A 443 VLSIIDKYAERGLRSLAVARQVVPEKTKESPGAPWEFVGLLPLFDPPRHDSAETIRRA-LNLGVNVKMITGDQLAIGKET 521 (885)
T ss_dssp HHHHHHHHTTTTCEEEEECCBCCCSSSSSCCCCCCCCCEEEEECCCCCHHHHHHHHHH-HHTTCCCEEEESSCHHHHTHH
T ss_pred HHHHHHHHHhCCCeEEEEEEeccccccccccccCcEEEEEEEeecccchhHHHHHHHH-HHcCCcEEEEcCCChHHHHHH
Confidence 445556666667788877664 244421112446789999999995 889999999999999998888
Q ss_pred hcCCCCccEEeeCCEEEEeCCCcceEecCCCCcccHHHHHHHHHHHHhhcCCcceEEecccceEEeeecCCCCCCchhHH
Q 003025 646 FSPCKKLGIAAEHGYFMRWSADEEWQNCGQSVDFGWIQIAEPVMKLYTESTDGSYIEIKESALVWHHRDADPGFGSSQAK 725 (856)
Q Consensus 646 ~~~~~~lgliaenG~~I~~~~~~~w~~~~~~~~~~w~~~v~~i~~~~~~~~~Gs~ie~k~~~l~~~~~~~dp~~~~~~a~ 725 (856)
... +|+... . .+ ...+ .|...+.. . .+.+ .+
T Consensus 522 A~~---lGi~~~-~----~~-~~~l--------------------------~g~~~~~~-------~--~~~~-----l~ 552 (885)
T 3b8c_A 522 GRR---LGMGTN-M----YP-SSAL--------------------------LGTHKDAN-------L--ASIP-----VE 552 (885)
T ss_dssp HHT---TTCTTC-C----ST-TSSC--------------------------CBGGGGTT-------S--CCSC-----HH
T ss_pred HHH---hCCccc-c----CC-ccee--------------------------eccccccc-------c--chhH-----HH
Confidence 854 444210 0 00 0000 01000000 0 0000 11
Q ss_pred HHHHHHHHHhcCCCeEEEEcCeEEEEEeCCCCHHHHHHHHHHHhhhcCCCcceEEEEeCCchhHHHHHHccccccCCCCC
Q 003025 726 ELLDHLESVLANEPAAVKSGQFIVEVKPQGVSKGVVAEKIFTTMAESGRHADFVLCIGDDRSDEDMFEIIGNATSSGVLS 805 (856)
Q Consensus 726 el~~~L~~~l~~~~~~v~~g~~~vEI~p~gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~ 805 (856)
++ +.+. ..+-++.|. +|...++.+.++ | +.|+++||+.||.+||+.++.
T Consensus 553 ~~-------~~~~-------~v~arv~P~--~K~~iV~~lq~~----g---~~Vam~GDGvNDapaLk~Adv-------- 601 (885)
T 3b8c_A 553 EL-------IEKA-------DGFAGVFPE--HKYEIVKKLQER----K---HIVGMTGDGVNDAPALKKADI-------- 601 (885)
T ss_dssp HH-------HHTS-------CCEECCCHH--HHHHHHHHHHHT----T---CCCCBCCCSSTTHHHHHHSSS--------
T ss_pred HH-------HhhC-------cEEEEECHH--HHHHHHHHHHHC----C---CeEEEEcCCchhHHHHHhCCE--------
Confidence 11 1121 124456665 799999998764 3 579999999999999999986
Q ss_pred CCccEEEEEeCCC----ccccceEcC--ChhHHHHHH
Q 003025 806 SNASVFACTVGQK----PSKAKYYLD--DAAEVVTML 836 (856)
Q Consensus 806 ~~~~~~av~vG~~----~s~A~y~l~--~~~eV~~~L 836 (856)
++++|+. +..|++++. +...+.+.+
T Consensus 602 ------GIAmg~gtd~ak~aADivl~~~~~~~I~~ai 632 (885)
T 3b8c_A 602 ------GIAVADATDAARGASDIVLTEPGLSVIISAV 632 (885)
T ss_dssp ------CCCCSSSHHHHGGGCSSCCSSCSHHHHTHHH
T ss_pred ------eEEeCCccHHHHHhcceeeccCchhHHHHHH
Confidence 4667753 467888874 345554443
|
| >1ltq_A Polynucleotide kinase; phosphatase, alpha/beta, P-loop, transferase; HET: ADP; 2.33A {Enterobacteria phage T4} SCOP: c.108.1.9 c.37.1.1 PDB: 1rc8_A* 1rpz_A* 1rrc_A* 2ia5_A | Back alignment and structure |
|---|
Probab=95.90 E-value=0.02 Score=60.92 Aligned_cols=49 Identities=24% Similarity=0.378 Sum_probs=37.9
Q ss_pred cEEEEEecCCCCCCCCCC---------CCCCCHHHHHHHHHHHhhCCCeEEEecCCChh
Q 003025 591 SRAILFDYDGTVMPQTSI---------NKAPSQAVISIINTLCNDARNTVFVVSGRGRD 640 (856)
Q Consensus 591 ~rlI~~DlDGTLl~~~~~---------~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~ 640 (856)
.+.+++|+|||+...... ...+-+.+.++|+.| ++.|++++|+|||+..
T Consensus 159 ~~~i~iD~dgtl~~~~~~~~~~~~~~~~~~~~~g~~e~L~~L-~~~g~~~~v~T~k~~~ 216 (301)
T 1ltq_A 159 PKAVIFDVDGTLAKMNGRGPYDLEKCDTDVINPMVVELSKMY-ALMGYQIVVVSGRESG 216 (301)
T ss_dssp CEEEEEETBTTTBCCSSCCTTCGGGGGGCCBCHHHHHHHHHH-HHTTCEEEEEECSCCC
T ss_pred cceEEEeCCCCcccccCCCchhhhhccccCCChHHHHHHHHH-HHCCCeEEEEeCCCcc
Confidence 578899999999772211 012468999999998 7789999999999754
|
| >3ia7_A CALG4; glycosysltransferase, calicheamicin, enediyne, transf; 1.91A {Micromonospora echinospora} | Back alignment and structure |
|---|
Probab=95.87 E-value=0.014 Score=64.35 Aligned_cols=101 Identities=13% Similarity=0.008 Sum_probs=64.0
Q ss_pred EEcCCCCHHHHHHHHHhcceeeeccccccCCCcccceeeeecCCCCCCCCCCCCCCCCceEEecCC-----ccccccc--
Q 003025 416 FIDKPVTLSERAAYYTIAECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEF-----IGCSPSL-- 488 (856)
Q Consensus 416 ~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~g~lV~Se~-----~G~~~~l-- 488 (856)
.+.+.++.. .++..||++|..+ |. .+..|+++++. |+|+.-. .+.++.+
T Consensus 284 ~~~~~~~~~---~ll~~ad~~v~~~---G~-~t~~Ea~~~G~-----------------P~v~~p~~~~~q~~~a~~~~~ 339 (402)
T 3ia7_A 284 EAHQWIPFH---SVLAHARACLTHG---TT-GAVLEAFAAGV-----------------PLVLVPHFATEAAPSAERVIE 339 (402)
T ss_dssp EEESCCCHH---HHHTTEEEEEECC---CH-HHHHHHHHTTC-----------------CEEECGGGCGGGHHHHHHHHH
T ss_pred EEecCCCHH---HHHhhCCEEEECC---CH-HHHHHHHHhCC-----------------CEEEeCCCcccHHHHHHHHHH
Confidence 455677765 7889999988765 33 46799999955 7775433 2344444
Q ss_pred -CCceeeCCC--CHHHHHHHHHHHHcCCHHHHHHHHHHHhhhh-hcCCHHHHHHHHHH
Q 003025 489 -SGAIRVNPW--NIEATAEAMHEAIQMNEAEKQLRHEKHYRYV-STHDVAYWARSFFQ 542 (856)
Q Consensus 489 -~~al~VnP~--d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v-~~~~~~~W~~~~l~ 542 (856)
..|+.+++. +.+++++++.++|+.+ +. +.+.++..+.+ ........++.+.+
T Consensus 340 ~g~g~~~~~~~~~~~~l~~~~~~ll~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~i~~ 395 (402)
T 3ia7_A 340 LGLGSVLRPDQLEPASIREAVERLAADS-AV-RERVRRMQRDILSSGGPARAADEVEA 395 (402)
T ss_dssp TTSEEECCGGGCSHHHHHHHHHHHHHCH-HH-HHHHHHHHHHHHTSCHHHHHHHHHHH
T ss_pred cCCEEEccCCCCCHHHHHHHHHHHHcCH-HH-HHHHHHHHHHHhhCChHHHHHHHHHH
Confidence 236778776 8999999999999853 33 33334433333 44444554444433
|
| >3rsc_A CALG2; TDP, enediyne, structural genomics, PSI-2, protein structure initiative, center for eukaryotic structural genomics; HET: TYD C0T; 2.19A {Micromonospora echinospora} PDB: 3iaa_A* | Back alignment and structure |
|---|
Probab=95.82 E-value=0.019 Score=63.71 Aligned_cols=100 Identities=17% Similarity=-0.039 Sum_probs=62.6
Q ss_pred EEcCCCCHHHHHHHHHhcceeeeccccccCCCcccceeeeecCCCCCCCCCCCCCCCCceEEecCC----ccccccc---
Q 003025 416 FIDKPVTLSERAAYYTIAECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEF----IGCSPSL--- 488 (856)
Q Consensus 416 ~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~g~lV~Se~----~G~~~~l--- 488 (856)
.+.+.+++. .++..||++|..+ |. .+..|+++++. |+|+--+ ...+..+
T Consensus 300 ~~~~~~~~~---~ll~~ad~~v~~~---G~-~t~~Ea~~~G~-----------------P~v~~p~~~~q~~~a~~l~~~ 355 (415)
T 3rsc_A 300 EAHRWVPHV---KVLEQATVCVTHG---GM-GTLMEALYWGR-----------------PLVVVPQSFDVQPMARRVDQL 355 (415)
T ss_dssp EEESCCCHH---HHHHHEEEEEESC---CH-HHHHHHHHTTC-----------------CEEECCCSGGGHHHHHHHHHH
T ss_pred EEEecCCHH---HHHhhCCEEEECC---cH-HHHHHHHHhCC-----------------CEEEeCCcchHHHHHHHHHHc
Confidence 345677765 7788899988765 33 46799999955 7777433 2233344
Q ss_pred CCceeeCCC--CHHHHHHHHHHHHcCCHHHHHHHHHHHhhhh-hcCCHHHHHHHHH
Q 003025 489 SGAIRVNPW--NIEATAEAMHEAIQMNEAEKQLRHEKHYRYV-STHDVAYWARSFF 541 (856)
Q Consensus 489 ~~al~VnP~--d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v-~~~~~~~W~~~~l 541 (856)
..|+.+++. +.++++++|.++|+.+ +. +.++++..+.+ ......+.++.+.
T Consensus 356 g~g~~~~~~~~~~~~l~~~i~~ll~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~i~ 409 (415)
T 3rsc_A 356 GLGAVLPGEKADGDTLLAAVGAVAADP-AL-LARVEAMRGHVRRAGGAARAADAVE 409 (415)
T ss_dssp TCEEECCGGGCCHHHHHHHHHHHHTCH-HH-HHHHHHHHHHHHHSCHHHHHHHHHH
T ss_pred CCEEEcccCCCCHHHHHHHHHHHHcCH-HH-HHHHHHHHHHHHhcCHHHHHHHHHH
Confidence 236777765 8899999999999853 33 33334433333 4444444444433
|
| >2yjn_A ERYCIII, glycosyltransferase; transferase, cytochrome P450; 3.09A {Saccharopolyspora erythraea} | Back alignment and structure |
|---|
Probab=95.73 E-value=0.024 Score=63.77 Aligned_cols=146 Identities=10% Similarity=-0.020 Sum_probs=85.1
Q ss_pred CeEEEeccCcccc-----CCHHHHHHHHHHHHHhCCCCcCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCC
Q 003025 336 KTVLLGVDDMDIF-----KGVDLKLLAMEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPG 410 (856)
Q Consensus 336 k~iil~VdRld~~-----KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~~~~lv~~IN~~~~~~~ 410 (856)
..|+++.|++... |.+...++|+..+ ++ .+|.++.. .+.++++ .
T Consensus 268 ~~v~v~~Gs~~~~~~~~~~~~~~~~~al~~~-----~~----~~v~~~g~-----~~~~~l~-----------------~ 316 (441)
T 2yjn_A 268 RRVCLTLGISSRENSIGQVSIEELLGAVGDV-----DA----EIIATFDA-----QQLEGVA-----------------N 316 (441)
T ss_dssp CEEEEEC----------CCSTTTTHHHHHTS-----SS----EEEECCCT-----TTTSSCS-----------------S
T ss_pred CEEEEECCCCcccccChHHHHHHHHHHHHcC-----CC----EEEEEECC-----cchhhhc-----------------c
Confidence 4688999999864 8888888888543 22 24333321 1111110 1
Q ss_pred cccEEEEcCCCCHHHHHHHHHhcceeeeccccccCCCcccceeeeecCCCCCCCCCCCCCCCCceEEecCCcc----ccc
Q 003025 411 YEPVVFIDKPVTLSERAAYYTIAECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIG----CSP 486 (856)
Q Consensus 411 ~~pvv~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~g~lV~Se~~G----~~~ 486 (856)
..+-+.+.+.+++.+ +|..||+||. +-| ..+..|+++|+. |+|+..+.+ .++
T Consensus 317 ~~~~v~~~~~~~~~~---ll~~ad~~V~---~~G-~~t~~Ea~~~G~-----------------P~i~~p~~~dQ~~na~ 372 (441)
T 2yjn_A 317 IPDNVRTVGFVPMHA---LLPTCAATVH---HGG-PGSWHTAAIHGV-----------------PQVILPDGWDTGVRAQ 372 (441)
T ss_dssp CCSSEEECCSCCHHH---HGGGCSEEEE---CCC-HHHHHHHHHTTC-----------------CEEECCCSHHHHHHHH
T ss_pred CCCCEEEecCCCHHH---HHhhCCEEEE---CCC-HHHHHHHHHhCC-----------------CEEEeCCcccHHHHHH
Confidence 112345667888754 5799999996 344 457899999955 888887743 333
Q ss_pred cc---CCceeeCCC--CHHHHHHHHHHHHcCCHHHHHHHHHHH-hhhhhcCCHHHHHH
Q 003025 487 SL---SGAIRVNPW--NIEATAEAMHEAIQMNEAEKQLRHEKH-YRYVSTHDVAYWAR 538 (856)
Q Consensus 487 ~l---~~al~VnP~--d~~~~A~ai~~aL~m~~~er~~r~~~~-~~~v~~~~~~~W~~ 538 (856)
.+ ..|+.+++. +.++++++|.++|+. +..+ .++.+. .+.........-++
T Consensus 373 ~l~~~g~g~~~~~~~~~~~~l~~~i~~ll~~-~~~~-~~~~~~~~~~~~~~~~~~~~~ 428 (441)
T 2yjn_A 373 RTQEFGAGIALPVPELTPDQLRESVKRVLDD-PAHR-AGAARMRDDMLAEPSPAEVVG 428 (441)
T ss_dssp HHHHHTSEEECCTTTCCHHHHHHHHHHHHHC-HHHH-HHHHHHHHHHHTSCCHHHHHH
T ss_pred HHHHcCCEEEcccccCCHHHHHHHHHHHhcC-HHHH-HHHHHHHHHHHcCCCHHHHHH
Confidence 34 347888775 889999999999984 3333 334443 33334444444444
|
| >2i7d_A 5'(3')-deoxyribonucleotidase, cytosolic type; hydrolase; HET: DUR; 1.20A {Homo sapiens} PDB: 2jar_A* 2jao_A* | Back alignment and structure |
|---|
Probab=95.42 E-value=0.0077 Score=59.66 Aligned_cols=21 Identities=19% Similarity=0.156 Sum_probs=18.2
Q ss_pred HHHHhhhcCCCcceEEEEeCCchh
Q 003025 765 IFTTMAESGRHADFVLCIGDDRSD 788 (856)
Q Consensus 765 Ll~~l~~~gi~~d~vlaiGD~~ND 788 (856)
.++++ |++++++++|||+.+|
T Consensus 122 ~~~~~---~~~~~~~~~vgDs~~d 142 (193)
T 2i7d_A 122 FVERI---ILTRDKTVVLGDLLID 142 (193)
T ss_dssp HHTTE---EECSCGGGBCCSEEEE
T ss_pred HHHHc---CCCcccEEEECCchhh
Confidence 45666 8899999999999999
|
| >3oti_A CALG3; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD C0T; 1.60A {Micromonospora echinospora} PDB: 3d0q_A* 3d0r_A* | Back alignment and structure |
|---|
Probab=95.37 E-value=0.038 Score=61.09 Aligned_cols=149 Identities=11% Similarity=-0.008 Sum_probs=84.2
Q ss_pred CCeEEEeccCcccc-CCHHHHHHHHHHHHHhCCCCcCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCccc
Q 003025 335 GKTVLLGVDDMDIF-KGVDLKLLAMEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEP 413 (856)
Q Consensus 335 ~k~iil~VdRld~~-KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~~~~lv~~IN~~~~~~~~~p 413 (856)
.+.+++++|++... |+......+++.+.+ . ++ .++.++.+. +.+.++ ...+
T Consensus 232 ~~~v~v~~G~~~~~~~~~~~~~~~~~~l~~-~-~~----~~v~~~g~~-----~~~~l~-----------------~~~~ 283 (398)
T 3oti_A 232 RPEVAITMGTIELQAFGIGAVEPIIAAAGE-V-DA----DFVLALGDL-----DISPLG-----------------TLPR 283 (398)
T ss_dssp SCEEEECCTTTHHHHHCGGGHHHHHHHHHT-S-SS----EEEEECTTS-----CCGGGC-----------------SCCT
T ss_pred CCEEEEEcCCCccccCcHHHHHHHHHHHHc-C-CC----EEEEEECCc-----Chhhhc-----------------cCCC
Confidence 45788999999655 354444444444422 2 23 355554322 111111 0112
Q ss_pred EEEEcCCCCHHHHHHHHHhcceeeeccccccCCCcccceeeeecCCCCCCCCCCCCCCCCceEEe----cCCcccc--cc
Q 003025 414 VVFIDKPVTLSERAAYYTIAECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVV----SEFIGCS--PS 487 (856)
Q Consensus 414 vv~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~g~lV~----Se~~G~~--~~ 487 (856)
-+.+.+.++..+ ++..||+||.. |-..+..||++|+. |+|+ .+-.+.+ +.
T Consensus 284 ~v~~~~~~~~~~---ll~~ad~~v~~----~G~~t~~Eal~~G~-----------------P~v~~p~~~dq~~~a~~~~ 339 (398)
T 3oti_A 284 NVRAVGWTPLHT---LLRTCTAVVHH----GGGGTVMTAIDAGI-----------------PQLLAPDPRDQFQHTAREA 339 (398)
T ss_dssp TEEEESSCCHHH---HHTTCSEEEEC----CCHHHHHHHHHHTC-----------------CEEECCCTTCCSSCTTHHH
T ss_pred cEEEEccCCHHH---HHhhCCEEEEC----CCHHHHHHHHHhCC-----------------CEEEcCCCchhHHHHHHHH
Confidence 234556776554 56779999843 33357899999955 7777 5556666 66
Q ss_pred c---CCceeeCCC--CHHHHHHHHHHHHcCCHHHHHHHHHHHhhhhhcCCHHHHHHHH
Q 003025 488 L---SGAIRVNPW--NIEATAEAMHEAIQMNEAEKQLRHEKHYRYVSTHDVAYWARSF 540 (856)
Q Consensus 488 l---~~al~VnP~--d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~~ 540 (856)
+ ..|+.+++. +.++++ ++|+. +..++...+...+..........++.+
T Consensus 340 ~~~~g~g~~~~~~~~~~~~l~----~ll~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l 392 (398)
T 3oti_A 340 VSRRGIGLVSTSDKVDADLLR----RLIGD-ESLRTAAREVREEMVALPTPAETVRRI 392 (398)
T ss_dssp HHHHTSEEECCGGGCCHHHHH----HHHHC-HHHHHHHHHHHHHHHTSCCHHHHHHHH
T ss_pred HHHCCCEEeeCCCCCCHHHHH----HHHcC-HHHHHHHHHHHHHHHhCCCHHHHHHHH
Confidence 6 347888776 455555 67763 444444444455555666666655543
|
| >2gfh_A Haloacid dehalogenase-like hydrolase domain conta; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.90A {Mus musculus} SCOP: c.108.1.6 PDB: 2w4m_A | Back alignment and structure |
|---|
Probab=95.17 E-value=0.036 Score=57.62 Aligned_cols=69 Identities=13% Similarity=0.148 Sum_probs=54.8
Q ss_pred HHHHHHHHHHHhhhcCCCcceEEEEeCC-chhHHHHHHccc-cccCCCCCCCccEEEEEeCCC-----ccccceEcCChh
Q 003025 758 KGVVAEKIFTTMAESGRHADFVLCIGDD-RSDEDMFEIIGN-ATSSGVLSSNASVFACTVGQK-----PSKAKYYLDDAA 830 (856)
Q Consensus 758 KG~al~~Ll~~l~~~gi~~d~vlaiGD~-~ND~~Mf~~ag~-~~~~~~~~~~~~~~av~vG~~-----~s~A~y~l~~~~ 830 (856)
+....+.+++++ |++++++++|||+ .||+.+.+.+|. . ++.|..+.. ...|.|++++..
T Consensus 178 ~p~~~~~~~~~~---~~~~~~~~~vGDs~~~Di~~A~~aG~~~-----------~i~v~~~~~~~~~~~~~~~~~i~~~~ 243 (260)
T 2gfh_A 178 APSIFYHCCDLL---GVQPGDCVMVGDTLETDIQGGLNAGLKA-----------TVWINKSGRVPLTSSPMPHYMVSSVL 243 (260)
T ss_dssp CHHHHHHHHHHH---TCCGGGEEEEESCTTTHHHHHHHTTCSE-----------EEEECTTCCCCSSCCCCCSEEESSGG
T ss_pred CHHHHHHHHHHc---CCChhhEEEECCCchhhHHHHHHCCCce-----------EEEEcCCCCCcCcccCCCCEEECCHH
Confidence 467899999999 9999999999996 999999999996 2 133333221 246889999999
Q ss_pred HHHHHHHHHH
Q 003025 831 EVVTMLEALA 840 (856)
Q Consensus 831 eV~~~L~~L~ 840 (856)
++..+|+.+.
T Consensus 244 el~~~l~~~~ 253 (260)
T 2gfh_A 244 ELPALLQSID 253 (260)
T ss_dssp GHHHHHHHHT
T ss_pred HHHHHHHHHh
Confidence 9999888765
|
| >3ocu_A Lipoprotein E; hydrolase, outer membrane; HET: NMN; 1.35A {Haemophilus influenzae} PDB: 3ocv_A* 3ocw_A* 3ocx_A* 3ocz_A* 3ocy_A* 3sf0_A* 2hlk_A 2hll_A 3et4_A 3et5_A | Back alignment and structure |
|---|
Probab=94.97 E-value=0.0083 Score=62.75 Aligned_cols=58 Identities=17% Similarity=0.235 Sum_probs=41.7
Q ss_pred CCcEEEEEecCCCCCCCCC-------C----------------CCCCCHHHHHHHHHHHhhCCCeEEEecCCChh----h
Q 003025 589 SKSRAILFDYDGTVMPQTS-------I----------------NKAPSQAVISIINTLCNDARNTVFVVSGRGRD----C 641 (856)
Q Consensus 589 s~~rlI~~DlDGTLl~~~~-------~----------------~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~----~ 641 (856)
.+..+|+||+||||++-.. . ...+-+.+.+.|+.| ++.|+.|+|+|||+.. .
T Consensus 56 ~~~~avVfDIDgTlldn~~y~~~~~~~~~~f~~~~w~~wv~~~~~~~~pG~~ell~~L-~~~G~ki~ivTgR~~~~~r~~ 134 (262)
T 3ocu_A 56 GKKKAVVADLNETMLDNSPYAGWQVQNNKPFDGKDWTRWVDARQSRAVPGAVEFNNYV-NSHNGKVFYVTNRKDSTEKSG 134 (262)
T ss_dssp TCEEEEEECCBTTTEECHHHHHHHHHHTCCCCHHHHHHHHHHTCCEECTTHHHHHHHH-HHTTEEEEEEEEEETTTTHHH
T ss_pred CCCeEEEEECCCcCCCCchhhhhhccccccCCHHHHHHHHHcCCCCCCccHHHHHHHH-HHCCCeEEEEeCCCccchHHH
Confidence 4567999999999997321 0 112335677788887 7789999999999764 5
Q ss_pred HHHhhc
Q 003025 642 LGKWFS 647 (856)
Q Consensus 642 l~~~~~ 647 (856)
...++.
T Consensus 135 T~~~L~ 140 (262)
T 3ocu_A 135 TIDDMK 140 (262)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 666663
|
| >3pct_A Class C acid phosphatase; hydrolase, outer membrane; 1.85A {Pasteurella multocida} | Back alignment and structure |
|---|
Probab=94.87 E-value=0.0081 Score=62.78 Aligned_cols=57 Identities=25% Similarity=0.326 Sum_probs=41.3
Q ss_pred CcEEEEEecCCCCCCCCC-----------------------CCCCCCHHHHHHHHHHHhhCCCeEEEecCCChh----hH
Q 003025 590 KSRAILFDYDGTVMPQTS-----------------------INKAPSQAVISIINTLCNDARNTVFVVSGRGRD----CL 642 (856)
Q Consensus 590 ~~rlI~~DlDGTLl~~~~-----------------------~~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~----~l 642 (856)
+..+++||+||||++... ....+-+.+.+.|+.| ++.|+.++|+|||+.. ..
T Consensus 57 ~~~avVfDIDgTlldn~~y~~~~~~~~~~f~~~~w~~wv~~g~~~~~pg~~ell~~L-~~~G~~i~ivTgR~~~~~r~~T 135 (260)
T 3pct_A 57 KKKAVVVDLDETMIDNSAYAGWQVQSGQGFSPKTWTKWVDARQSAAIPGAVEFSNYV-NANGGTMFFVSNRRDDVEKAGT 135 (260)
T ss_dssp -CEEEEECCBTTTEECHHHHHHHHHHTCCCCHHHHHHHHHTTCCEECTTHHHHHHHH-HHTTCEEEEEEEEETTTSHHHH
T ss_pred CCCEEEEECCccCcCChhHHHhhcccCCCCCHHHHHHHHHcCCCCCCccHHHHHHHH-HHCCCeEEEEeCCCccccHHHH
Confidence 346999999999997210 0122346778889997 7789999999999764 66
Q ss_pred HHhhc
Q 003025 643 GKWFS 647 (856)
Q Consensus 643 ~~~~~ 647 (856)
..++.
T Consensus 136 ~~~L~ 140 (260)
T 3pct_A 136 VDDMK 140 (260)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 66663
|
| >2i6x_A Hydrolase, haloacid dehalogenase-like family; HAD superfamily, struct genomics, PSI-2, protein structure initiative; HET: MSE; 2.40A {Porphyromonas gingivalis} | Back alignment and structure |
|---|
Probab=94.79 E-value=0.02 Score=56.75 Aligned_cols=37 Identities=16% Similarity=0.187 Sum_probs=34.6
Q ss_pred HHHHHHHHHHHhhhcCCCcceEEEEeCCchhHHHHHHccc
Q 003025 758 KGVVAEKIFTTMAESGRHADFVLCIGDDRSDEDMFEIIGN 797 (856)
Q Consensus 758 KG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~ 797 (856)
+..+++.+++++ |++++++++|||+.||++|++.+|.
T Consensus 152 ~~~~~~~~~~~~---~~~~~~~~~igD~~~Di~~a~~aG~ 188 (211)
T 2i6x_A 152 NEDIFLEMIADS---GMKPEETLFIDDGPANVATAERLGF 188 (211)
T ss_dssp SHHHHHHHHHHH---CCCGGGEEEECSCHHHHHHHHHTTC
T ss_pred CHHHHHHHHHHh---CCChHHeEEeCCCHHHHHHHHHcCC
Confidence 566899999999 9999999999999999999999996
|
| >2fea_A 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; 2633731, structural genomics, joint center for structural GE JCSG; HET: MSE; 2.00A {Bacillus subtilis} SCOP: c.108.1.20 | Back alignment and structure |
|---|
Probab=94.53 E-value=0.027 Score=57.48 Aligned_cols=66 Identities=15% Similarity=0.162 Sum_probs=49.1
Q ss_pred CCHHHHHHHHHHHhhhcCCCcceEEEEeCCchhHHHHHHccccccCCCCCCCccEEEEEeCCC----cc-ccceEcCChh
Q 003025 756 VSKGVVAEKIFTTMAESGRHADFVLCIGDDRSDEDMFEIIGNATSSGVLSSNASVFACTVGQK----PS-KAKYYLDDAA 830 (856)
Q Consensus 756 vsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~----~s-~A~y~l~~~~ 830 (856)
..|..+++ ++ +++++++++|||+.+|+.+.+.+|.. ++..|.. .. .|.+++++..
T Consensus 150 ~~K~~~~~----~~---~~~~~~~~~vGDs~~Di~~a~~aG~~-------------~~~~~~~~~~~~~~~~~~~~~~~~ 209 (236)
T 2fea_A 150 CCKPSVIH----EL---SEPNQYIIMIGDSVTDVEAAKLSDLC-------------FARDYLLNECREQNLNHLPYQDFY 209 (236)
T ss_dssp SCHHHHHH----HH---CCTTCEEEEEECCGGGHHHHHTCSEE-------------EECHHHHHHHHHTTCCEECCSSHH
T ss_pred CcHHHHHH----HH---hccCCeEEEEeCChHHHHHHHhCCee-------------eechHHHHHHHHCCCCeeecCCHH
Confidence 45776665 44 88999999999999999999999863 2322321 12 2778889999
Q ss_pred HHHHHHHHHHH
Q 003025 831 EVVTMLEALAE 841 (856)
Q Consensus 831 eV~~~L~~L~~ 841 (856)
++.++|..+.+
T Consensus 210 el~~~l~~~~~ 220 (236)
T 2fea_A 210 EIRKEIENVKE 220 (236)
T ss_dssp HHHHHHHTSHH
T ss_pred HHHHHHHHhHH
Confidence 99998887643
|
| >1iir_A Glycosyltransferase GTFB; rossmann fold; 1.80A {Amycolatopsis orientalis} SCOP: c.87.1.5 | Back alignment and structure |
|---|
Probab=92.19 E-value=0.34 Score=53.75 Aligned_cols=137 Identities=11% Similarity=0.034 Sum_probs=81.9
Q ss_pred CCeEEEeccCc-cccCCHHHHHHHHHHHHHhCCCCcCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCccc
Q 003025 335 GKTVLLGVDDM-DIFKGVDLKLLAMEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEP 413 (856)
Q Consensus 335 ~k~iil~VdRl-d~~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~~~~lv~~IN~~~~~~~~~p 413 (856)
...++++.|++ +..|.+...++|++++ + .+ ++++++... .+ . . ...+
T Consensus 238 ~~~v~v~~Gs~~~~~~~~~~~~~al~~~----~-~~---~v~~~g~~~----~~---~------------~-----~~~~ 285 (415)
T 1iir_A 238 PPPVYLGFGSLGAPADAVRVAIDAIRAH----G-RR---VILSRGWAD----LV---L------------P-----DDGA 285 (415)
T ss_dssp SCCEEEECC---CCHHHHHHHHHHHHHT----T-CC---EEECTTCTT----CC---C------------S-----SCGG
T ss_pred CCeEEEeCCCCCCcHHHHHHHHHHHHHC----C-Ce---EEEEeCCCc----cc---c------------c-----CCCC
Confidence 35788999999 6788888888888654 2 22 223223111 00 0 0 1112
Q ss_pred EEEEcCCCCHHHHHHHHHhcceeeeccccccCCCcccceeeeecCCCCCCCCCCCCCCCCceEEecCCcc----ccccc-
Q 003025 414 VVFIDKPVTLSERAAYYTIAECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIG----CSPSL- 488 (856)
Q Consensus 414 vv~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~g~lV~Se~~G----~~~~l- 488 (856)
-+.+.+.+++.++ +..||+||.. -|. .+..|+++++. |+|+--+.+ .+..+
T Consensus 286 ~v~~~~~~~~~~~---l~~~d~~v~~---~G~-~t~~Ea~~~G~-----------------P~i~~p~~~dQ~~na~~l~ 341 (415)
T 1iir_A 286 DCFAIGEVNHQVL---FGRVAAVIHH---GGA-GTTHVAARAGA-----------------PQILLPQMADQPYYAGRVA 341 (415)
T ss_dssp GEEECSSCCHHHH---GGGSSEEEEC---CCH-HHHHHHHHHTC-----------------CEEECCCSTTHHHHHHHHH
T ss_pred CEEEeCcCChHHH---HhhCCEEEeC---CCh-hHHHHHHHcCC-----------------CEEECCCCCccHHHHHHHH
Confidence 2346678887654 6999999964 354 67999999955 788776544 23333
Q ss_pred --CCceeeCCC--CHHHHHHHHHHHHcCCHHHHHHHHHHHhhhhhc
Q 003025 489 --SGAIRVNPW--NIEATAEAMHEAIQMNEAEKQLRHEKHYRYVST 530 (856)
Q Consensus 489 --~~al~VnP~--d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~ 530 (856)
..|+.+++. +.++++++|.++ +. ++ .+.+.++..+.+..
T Consensus 342 ~~g~g~~~~~~~~~~~~l~~~i~~l-~~-~~-~~~~~~~~~~~~~~ 384 (415)
T 1iir_A 342 ELGVGVAHDGPIPTFDSLSAALATA-LT-PE-THARATAVAGTIRT 384 (415)
T ss_dssp HHTSEEECSSSSCCHHHHHHHHHHH-TS-HH-HHHHHHHHHHHSCS
T ss_pred HCCCcccCCcCCCCHHHHHHHHHHH-cC-HH-HHHHHHHHHHHHhh
Confidence 336777654 789999999998 63 33 33344444443433
|
| >2iya_A OLEI, oleandomycin glycosyltransferase; carbohydrate, glycosylation, enzyme, macrolide; HET: UDP ZIO; 1.7A {Streptomyces antibioticus} | Back alignment and structure |
|---|
Probab=92.11 E-value=0.42 Score=52.99 Aligned_cols=96 Identities=15% Similarity=-0.007 Sum_probs=61.4
Q ss_pred EEcCCCCHHHHHHHHHhcceeeeccccccCCCcccceeeeecCCCCCCCCCCCCCCCCceEEecCCcc----ccccc---
Q 003025 416 FIDKPVTLSERAAYYTIAECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIG----CSPSL--- 488 (856)
Q Consensus 416 ~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~g~lV~Se~~G----~~~~l--- 488 (856)
.+.+.+++. .+|..||+||.. -|. .+..|+++++. |+|+.-+.+ .+..+
T Consensus 308 ~~~~~~~~~---~~l~~~d~~v~~---~G~-~t~~Ea~~~G~-----------------P~i~~p~~~dQ~~na~~l~~~ 363 (424)
T 2iya_A 308 EVHQWVPQL---DILTKASAFITH---AGM-GSTMEALSNAV-----------------PMVAVPQIAEQTMNAERIVEL 363 (424)
T ss_dssp EEESSCCHH---HHHTTCSEEEEC---CCH-HHHHHHHHTTC-----------------CEEECCCSHHHHHHHHHHHHT
T ss_pred EEecCCCHH---HHHhhCCEEEEC---Cch-hHHHHHHHcCC-----------------CEEEecCccchHHHHHHHHHC
Confidence 455677765 578899998753 343 57899999955 788776543 12223
Q ss_pred CCceeeCCC--CHHHHHHHHHHHHcCCHHHHHHHHHHHhhhhhcCCHHHHH
Q 003025 489 SGAIRVNPW--NIEATAEAMHEAIQMNEAEKQLRHEKHYRYVSTHDVAYWA 537 (856)
Q Consensus 489 ~~al~VnP~--d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~ 537 (856)
..|+.+++. +.++++++|.++|+.+ +.+.+.++..+.+...+...-+
T Consensus 364 g~g~~~~~~~~~~~~l~~~i~~ll~~~--~~~~~~~~~~~~~~~~~~~~~~ 412 (424)
T 2iya_A 364 GLGRHIPRDQVTAEKLREAVLAVASDP--GVAERLAAVRQEIREAGGARAA 412 (424)
T ss_dssp TSEEECCGGGCCHHHHHHHHHHHHHCH--HHHHHHHHHHHHHHTSCHHHHH
T ss_pred CCEEEcCcCCCCHHHHHHHHHHHHcCH--HHHHHHHHHHHHHHhcCcHHHH
Confidence 236777654 8899999999999743 3334444444445444433333
|
| >2fea_A 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; 2633731, structural genomics, joint center for structural GE JCSG; HET: MSE; 2.00A {Bacillus subtilis} SCOP: c.108.1.20 | Back alignment and structure |
|---|
Probab=90.89 E-value=0.12 Score=52.64 Aligned_cols=33 Identities=12% Similarity=0.174 Sum_probs=26.3
Q ss_pred HHHHHHHHHHHhhCCCeEEEecCCChhhHHHhhc
Q 003025 614 QAVISIINTLCNDARNTVFVVSGRGRDCLGKWFS 647 (856)
Q Consensus 614 ~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~ 647 (856)
+.+.++|+.| ++.|+.++|+|+.+...+..++.
T Consensus 80 pg~~~~l~~L-~~~g~~~~ivS~~~~~~~~~~l~ 112 (236)
T 2fea_A 80 EGFREFVAFI-NEHEIPFYVISGGMDFFVYPLLE 112 (236)
T ss_dssp TTHHHHHHHH-HHHTCCEEEEEEEEHHHHHHHHT
T ss_pred ccHHHHHHHH-HhCCCeEEEEeCCcHHHHHHHHh
Confidence 4556778886 66799999999999888888775
|
| >4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A* | Back alignment and structure |
|---|
Probab=90.41 E-value=1 Score=54.07 Aligned_cols=176 Identities=12% Similarity=0.078 Sum_probs=104.5
Q ss_pred CCeEEEeccCccccCCHHHHHHHHHHHHHhCCCCcCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCcccE
Q 003025 335 GKTVLLGVDDMDIFKGVDLKLLAMEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPV 414 (856)
Q Consensus 335 ~k~iil~VdRld~~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~~~~lv~~IN~~~~~~~~~pv 414 (856)
+..++.+..++. |=-+..+..+.++|++-|+-+ |+.+..+. ... +.+.+.+++ +|- .-.-+
T Consensus 522 ~~v~f~~fN~~~--Ki~p~~~~~W~~IL~~vP~S~----L~Ll~~~~----~~~----~~l~~~~~~----~gi-~~~r~ 582 (723)
T 4gyw_A 522 DAIVYCNFNQLY--KIDPSTLQMWANILKRVPNSV----LWLLRFPA----VGE----PNIQQYAQN----MGL-PQNRI 582 (723)
T ss_dssp TSEEEECCSCGG--GCCHHHHHHHHHHHHHCSSEE----EEEEETTG----GGH----HHHHHHHHH----TTC-CGGGE
T ss_pred CCEEEEeCCccc--cCCHHHHHHHHHHHHhCCCCe----EEEEeCcH----HHH----HHHHHHHHh----cCC-CcCeE
Confidence 445556666554 456789999999999999754 76665432 111 223333333 221 11224
Q ss_pred EEEcCCCCHHHHHHHHHhcceeeeccccccCCCcccceeeeecCCCCCCCCCCCCCCCCceEEecC---Ccc-ccccc-C
Q 003025 415 VFIDKPVTLSERAAYYTIAECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSE---FIG-CSPSL-S 489 (856)
Q Consensus 415 v~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~g~lV~Se---~~G-~~~~l-~ 489 (856)
+ |.+..+.++..+.|+.+|||+-|--+-| +.+..||+.++. |||.=. |+| ++.++ .
T Consensus 583 ~-f~~~~~~~~~l~~~~~~Di~LDt~p~~g-~tT~~eal~~Gv-----------------Pvvt~~g~~~~sR~~~s~l~ 643 (723)
T 4gyw_A 583 I-FSPVAPKEEHVRRGQLADVCLDTPLCNG-HTTGMDVLWAGT-----------------PMVTMPGETLASRVAASQLT 643 (723)
T ss_dssp E-EEECCCHHHHHHHGGGCSEEECCSSSCC-SHHHHHHHHTTC-----------------CEEBCCCSSGGGTHHHHHHH
T ss_pred E-ECCCCCHHHHHHHhCCCeEEeCCCCcCC-HHHHHHHHHcCC-----------------CEEEccCCCccHhHHHHHHH
Confidence 4 5557899999999999999999998877 688999999843 454432 111 00111 1
Q ss_pred --C--ceeeCCCCHHHHHHHHHHHHcCCHHHHHHHHHHHhhhhhc---CCHHHHHHHHHHHHHHHHHhh
Q 003025 490 --G--AIRVNPWNIEATAEAMHEAIQMNEAEKQLRHEKHYRYVST---HDVAYWARSFFQDMERTCKDH 551 (856)
Q Consensus 490 --~--al~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~---~~~~~W~~~~l~~l~~~~~~~ 551 (856)
| -++. +|.++..+.-.++-+. .+.+....+++++.... +|...|+++|-..+...++..
T Consensus 644 ~~gl~e~ia--~~~~~Y~~~a~~la~d-~~~l~~lr~~l~~~~~~s~l~d~~~~~~~le~a~~~~w~r~ 709 (723)
T 4gyw_A 644 CLGCLELIA--KNRQEYEDIAVKLGTD-LEYLKKVRGKVWKQRISSPLFNTKQYTMELERLYLQMWEHY 709 (723)
T ss_dssp HHTCGGGBC--SSHHHHHHHHHHHHHC-HHHHHHHHHHHHHHHHHSSTTCHHHHHHHHHHHHHHHHHHH
T ss_pred HcCCccccc--CCHHHHHHHHHHHhcC-HHHHHHHHHHHHHHHHhCcCcCHHHHHHHHHHHHHHHHHHH
Confidence 1 1222 3455444433333333 33333334445544433 688999998888888777654
|
| >1rrv_A Glycosyltransferase GTFD; GT-B, glycosyltransferase, rossmann fold, glycopeptide, VACO antibiotic, transferase-antibiotic complex; HET: OMZ GHP OMY 3FG TYD BGC; 2.00A {Amycolatopsis orientalis} SCOP: c.87.1.5 | Back alignment and structure |
|---|
Probab=89.43 E-value=0.66 Score=51.34 Aligned_cols=137 Identities=12% Similarity=0.047 Sum_probs=81.2
Q ss_pred CCeEEEeccCcc---ccCCHHHHHHHHHHHHHhCCCCcCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCc
Q 003025 335 GKTVLLGVDDMD---IFKGVDLKLLAMEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGY 411 (856)
Q Consensus 335 ~k~iil~VdRld---~~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~~~~lv~~IN~~~~~~~~ 411 (856)
...++++.|++. ..|.+...++|++.+ + ++ ++++++... .+ . ...
T Consensus 237 ~~~v~v~~Gs~~~~~~~~~~~~~~~al~~~----~-~~---~v~~~g~~~----~~---~------------~~~----- 284 (416)
T 1rrv_A 237 SPPVHIGFGSSSGRGIADAAKVAVEAIRAQ----G-RR---VILSRGWTE----LV---L------------PDD----- 284 (416)
T ss_dssp SCCEEECCTTCCSHHHHHHHHHHHHHHHHT----T-CC---EEEECTTTT----CC---C------------SCC-----
T ss_pred CCeEEEecCCCCccChHHHHHHHHHHHHHC----C-Ce---EEEEeCCcc----cc---c------------cCC-----
Confidence 356889999984 566667777777653 2 22 223333211 00 0 001
Q ss_pred ccEEEEcCCCCHHHHHHHHHhcceeeeccccccCCCcccceeeeecCCCCCCCCCCCCCCCCceEEecCCcc----cccc
Q 003025 412 EPVVFIDKPVTLSERAAYYTIAECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIG----CSPS 487 (856)
Q Consensus 412 ~pvv~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~g~lV~Se~~G----~~~~ 487 (856)
.+-+.+.+.+++.+ +|..||+||. +-|.| +..|+++|+. |+|+--+.+ .+..
T Consensus 285 ~~~v~~~~~~~~~~---ll~~~d~~v~---~~G~~-t~~Ea~~~G~-----------------P~i~~p~~~dQ~~na~~ 340 (416)
T 1rrv_A 285 RDDCFAIDEVNFQA---LFRRVAAVIH---HGSAG-TEHVATRAGV-----------------PQLVIPRNTDQPYFAGR 340 (416)
T ss_dssp CTTEEEESSCCHHH---HGGGSSEEEE---CCCHH-HHHHHHHHTC-----------------CEEECCCSBTHHHHHHH
T ss_pred CCCEEEeccCChHH---HhccCCEEEe---cCChh-HHHHHHHcCC-----------------CEEEccCCCCcHHHHHH
Confidence 11134556788655 5699999996 45654 9999999955 777765433 3333
Q ss_pred c---CCceeeCC--CCHHHHHHHHHHHHcCCHHHHHHHHHHHhhhhhc
Q 003025 488 L---SGAIRVNP--WNIEATAEAMHEAIQMNEAEKQLRHEKHYRYVST 530 (856)
Q Consensus 488 l---~~al~VnP--~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~ 530 (856)
+ ..|+.+++ .+.++++++|.++ + ++ +.+.++++..+.+..
T Consensus 341 l~~~g~g~~~~~~~~~~~~l~~~i~~l-~-~~-~~~~~~~~~~~~~~~ 385 (416)
T 1rrv_A 341 VAALGIGVAHDGPTPTFESLSAALTTV-L-AP-ETRARAEAVAGMVLT 385 (416)
T ss_dssp HHHHTSEEECSSSCCCHHHHHHHHHHH-T-SH-HHHHHHHHHTTTCCC
T ss_pred HHHCCCccCCCCCCCCHHHHHHHHHHh-h-CH-HHHHHHHHHHHHHhh
Confidence 3 23676754 5789999999998 6 33 334444454444443
|
| >2hhl_A CTD small phosphatase-like protein; CTD phosphatase, keggins anion, structural genomics, PSI, protein structure initiative; HET: KEG; 2.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=88.20 E-value=0.32 Score=48.46 Aligned_cols=59 Identities=7% Similarity=0.027 Sum_probs=43.0
Q ss_pred cCCcEEEEEecCCCCCCCCCCCC--------------------CCCHHHHHHHHHHHhhCCCeEEEecCCChhhHHHhhc
Q 003025 588 RSKSRAILFDYDGTVMPQTSINK--------------------APSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFS 647 (856)
Q Consensus 588 ~s~~rlI~~DlDGTLl~~~~~~~--------------------~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~ 647 (856)
..+++.+++|+||||+....... ..-+.+.+.|++| .+. ..++|+|..+...+...+.
T Consensus 25 ~~~k~~LVLDLD~TLvhs~~~~~~~~d~~~~~~~~g~~~~~~v~~RPgv~efL~~l-~~~-~~i~I~Tss~~~~a~~vl~ 102 (195)
T 2hhl_A 25 DYGKKCVVIDLDETLVHSSFKPISNADFIVPVEIDGTIHQVYVLKRPHVDEFLQRM-GQL-FECVLFTASLAKYADPVAD 102 (195)
T ss_dssp GTTCCEEEECCBTTTEEEESSCCTTCSEEEEEEETTEEEEEEEEECTTHHHHHHHH-HHH-SEEEEECSSCHHHHHHHHH
T ss_pred cCCCeEEEEccccceEcccccCCCCccceeeeecCCceeeEEEEeCcCHHHHHHHH-HcC-CeEEEEcCCCHHHHHHHHH
Confidence 35689999999999997321100 1236778888887 444 8999999999988888774
Q ss_pred C
Q 003025 648 P 648 (856)
Q Consensus 648 ~ 648 (856)
.
T Consensus 103 ~ 103 (195)
T 2hhl_A 103 L 103 (195)
T ss_dssp H
T ss_pred H
Confidence 3
|
| >3h4t_A Glycosyltransferase GTFA, glycosyltransferase; vancomycin, teicoplanin, ORF1, natural products, antibiotic; HET: UDP; 1.15A {Amycolatopsis orientalis} SCOP: c.87.1.5 PDB: 3h4i_A* 1pn3_A* 1pnv_A* | Back alignment and structure |
|---|
Probab=88.04 E-value=2.5 Score=46.47 Aligned_cols=137 Identities=13% Similarity=0.024 Sum_probs=81.0
Q ss_pred CCeEEEeccCcc-ccCCHHHHHHHHHHHHHhCCCCcCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCccc
Q 003025 335 GKTVLLGVDDMD-IFKGVDLKLLAMEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEP 413 (856)
Q Consensus 335 ~k~iil~VdRld-~~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~~~~lv~~IN~~~~~~~~~p 413 (856)
.+.|+++.|++. ..+.+...++|++++ +++ +|..+.+.... .. +..+
T Consensus 221 ~~~Vlv~~Gs~~~~~~~~~~~~~al~~~-----~~~----vv~~~g~~~~~-----~~------------------~~~~ 268 (404)
T 3h4t_A 221 SPPVYVGFGSGPAPAEAARVAIEAVRAQ-----GRR----VVLSSGWAGLG-----RI------------------DEGD 268 (404)
T ss_dssp SCCEEECCTTSCCCTTHHHHHHHHHHHT-----TCC----EEEECTTTTCC-----CS------------------SCCT
T ss_pred CCeEEEECCCCCCcHHHHHHHHHHHHhC-----CCE----EEEEeCCcccc-----cc------------------cCCC
Confidence 467889999998 666666777777653 232 33332211000 00 0012
Q ss_pred EEEEcCCCCHHHHHHHHHhcceeeeccccccCCCcccceeeeecCCCCCCCCCCCCCCCCceEEecCCcccc----ccc-
Q 003025 414 VVFIDKPVTLSERAAYYTIAECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIGCS----PSL- 488 (856)
Q Consensus 414 vv~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~----~~l- 488 (856)
-+.+.+.+++.+ ++..||++|-.+ |. .+..|+++++. |+|+--+.|-. ..+
T Consensus 269 ~v~~~~~~~~~~---ll~~~d~~v~~g---G~-~t~~Eal~~Gv-----------------P~v~~p~~~dQ~~na~~~~ 324 (404)
T 3h4t_A 269 DCLVVGEVNHQV---LFGRVAAVVHHG---GA-GTTTAVTRAGA-----------------PQVVVPQKADQPYYAGRVA 324 (404)
T ss_dssp TEEEESSCCHHH---HGGGSSEEEECC---CH-HHHHHHHHHTC-----------------CEEECCCSTTHHHHHHHHH
T ss_pred CEEEecCCCHHH---HHhhCcEEEECC---cH-HHHHHHHHcCC-----------------CEEEcCCcccHHHHHHHHH
Confidence 233456788755 456899998544 33 46689999955 77776554421 112
Q ss_pred --CCceeeCCC--CHHHHHHHHHHHHcCCHHHHHHHHHHHhhhhhc
Q 003025 489 --SGAIRVNPW--NIEATAEAMHEAIQMNEAEKQLRHEKHYRYVST 530 (856)
Q Consensus 489 --~~al~VnP~--d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~ 530 (856)
..|+.+++. +.+++++++.++|+ + +.+.++++..+.+..
T Consensus 325 ~~G~g~~l~~~~~~~~~l~~ai~~ll~--~-~~~~~~~~~~~~~~~ 367 (404)
T 3h4t_A 325 DLGVGVAHDGPTPTVESLSAALATALT--P-GIRARAAAVAGTIRT 367 (404)
T ss_dssp HHTSEEECSSSSCCHHHHHHHHHHHTS--H-HHHHHHHHHHTTCCC
T ss_pred HCCCEeccCcCCCCHHHHHHHHHHHhC--H-HHHHHHHHHHHHHhh
Confidence 236666553 78999999999997 3 344455555555555
|
| >1qyi_A ZR25, hypothetical protein; structural genomics, PSI, protein structure initiative, NORT structural genomics consortium, NESG; 2.50A {Staphylococcus aureus subsp} SCOP: c.108.1.13 | Back alignment and structure |
|---|
Probab=87.83 E-value=0.54 Score=51.92 Aligned_cols=55 Identities=25% Similarity=0.360 Sum_probs=43.4
Q ss_pred CCcceEEEEeCCchhHHHHHHccccccCCCCCCCccEEEEEeCCC---------ccccceEcCChhHHHHHHHHH
Q 003025 774 RHADFVLCIGDDRSDEDMFEIIGNATSSGVLSSNASVFACTVGQK---------PSKAKYYLDDAAEVVTMLEAL 839 (856)
Q Consensus 774 i~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~---------~s~A~y~l~~~~eV~~~L~~L 839 (856)
++++++++|||+.+|+.+.+.+|.. ++.|..|.. ...|++++++..++..+|+..
T Consensus 313 v~p~e~l~VGDs~~Di~aAk~AG~~-----------~I~V~~g~~~~~~~~~l~~~~ad~vi~sl~eL~~~l~~~ 376 (384)
T 1qyi_A 313 VNKDDVFIVGDSLADLLSAQKIGAT-----------FIGTLTGLKGKDAAGELEAHHADYVINHLGELRGVLDNL 376 (384)
T ss_dssp SCTTTEEEEESSHHHHHHHHHHTCE-----------EEEESCBTTBGGGHHHHHHTTCSEEESSGGGHHHHHSCT
T ss_pred CCCcCeEEEcCCHHHHHHHHHcCCE-----------EEEECCCccccccHHHHhhcCCCEEECCHHHHHHHHHHH
Confidence 7899999999999999999999973 355555542 136889999999988877543
|
| >2ght_A Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1; protein-peptide complex, HAD superfamily, hydrolase; HET: SEP; 1.80A {Homo sapiens} PDB: 2ghq_A* 3pgl_A* 1t9z_A* 1ta0_A* 3l0c_A 3l0y_A 3l0b_A* 2q5e_A | Back alignment and structure |
|---|
Probab=86.78 E-value=0.43 Score=46.77 Aligned_cols=58 Identities=7% Similarity=0.031 Sum_probs=42.1
Q ss_pred CCcEEEEEecCCCCCCCCCCC--------------------CCCCHHHHHHHHHHHhhCCCeEEEecCCChhhHHHhhcC
Q 003025 589 SKSRAILFDYDGTVMPQTSIN--------------------KAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSP 648 (856)
Q Consensus 589 s~~rlI~~DlDGTLl~~~~~~--------------------~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~ 648 (856)
.+++.+++|+|+||+...... -..-+.+.+.|+++ .+. ..++|+|..+...+...+..
T Consensus 13 ~~k~~LVLDLD~TLvhs~~~~~~~~d~~~~~~~~~~~~~~~v~~rPg~~efL~~l-~~~-~~i~I~T~~~~~~a~~vl~~ 90 (181)
T 2ght_A 13 SDKICVVINLDETLVHSSFKPVNNADFIIPVEIDGVVHQVYVLKRPHVDEFLQRM-GEL-FECVLFTASLAKYADPVADL 90 (181)
T ss_dssp TTSCEEEECCBTTTEEEESSCCSSCSEEEEEEETTEEEEEEEEECTTHHHHHHHH-HHH-SEEEEECSSCHHHHHHHHHH
T ss_pred CCCeEEEECCCCCeECCcccCCCCccceeeeeeCCeeEEEEEEeCCCHHHHHHHH-HhC-CCEEEEcCCCHHHHHHHHHH
Confidence 467899999999999732110 01246777888887 443 89999999998888887743
|
| >2p11_A Hypothetical protein; putative haloacid dehalogenase-like hydrolase, structural GE joint center for structural genomics, JCSG; 2.20A {Burkholderia xenovorans} | Back alignment and structure |
|---|
Probab=85.94 E-value=0.17 Score=51.12 Aligned_cols=69 Identities=10% Similarity=0.069 Sum_probs=46.1
Q ss_pred CCHHHHHHHHHHHhhhcCCCcceEEEEeCCchhHHHHH---HccccccCCCCCCCccEEEEEeCCC--c------c-ccc
Q 003025 756 VSKGVVAEKIFTTMAESGRHADFVLCIGDDRSDEDMFE---IIGNATSSGVLSSNASVFACTVGQK--P------S-KAK 823 (856)
Q Consensus 756 vsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~---~ag~~~~~~~~~~~~~~~av~vG~~--~------s-~A~ 823 (856)
..|...++.+++ +++++++++|||+.+|+.+++ .+|. .++.|..|.. + . .|+
T Consensus 146 ~~K~~~~~~~~~-----~~~~~~~~~vgDs~~d~~di~~A~~aG~-----------~~i~v~~g~~~~~~~~l~~~~~~~ 209 (231)
T 2p11_A 146 IHKELMLDQVME-----CYPARHYVMVDDKLRILAAMKKAWGARL-----------TTVFPRQGHYAFDPKEISSHPPAD 209 (231)
T ss_dssp SSGGGCHHHHHH-----HSCCSEEEEECSCHHHHHHHHHHHGGGE-----------EEEEECCSSSSSCHHHHHHSCCCS
T ss_pred CChHHHHHHHHh-----cCCCceEEEEcCccchhhhhHHHHHcCC-----------eEEEeCCCCCCCcchhccccCCCc
Confidence 356656665554 578999999999999555554 4553 2345555521 1 1 488
Q ss_pred eEcCChhHHHHHHHHHH
Q 003025 824 YYLDDAAEVVTMLEALA 840 (856)
Q Consensus 824 y~l~~~~eV~~~L~~L~ 840 (856)
+++++..++.++|..+.
T Consensus 210 ~~i~~~~el~~~l~~~~ 226 (231)
T 2p11_A 210 VTVERIGDLVEMDAEWL 226 (231)
T ss_dssp EEESSGGGGGGCGGGGC
T ss_pred eeecCHHHHHHHHHHHH
Confidence 99999998887776554
|
| >2gfh_A Haloacid dehalogenase-like hydrolase domain conta; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.90A {Mus musculus} SCOP: c.108.1.6 PDB: 2w4m_A | Back alignment and structure |
|---|
Probab=85.87 E-value=0.19 Score=52.10 Aligned_cols=32 Identities=31% Similarity=0.592 Sum_probs=21.4
Q ss_pred CCcEEEEEecCCCCCCCCCCCCCCCHHHHHHHHHH
Q 003025 589 SKSRAILFDYDGTVMPQTSINKAPSQAVISIINTL 623 (856)
Q Consensus 589 s~~rlI~~DlDGTLl~~~~~~~~~s~~~~~aL~~L 623 (856)
.++|+|+||+||||++ +.........++++.+
T Consensus 16 ~~~k~viFDlDGTLvd---s~~~~~~a~~~~~~~~ 47 (260)
T 2gfh_A 16 SRVRAVFFDLDNTLID---TAGASRRGMLEVIKLL 47 (260)
T ss_dssp CCCCEEEECCBTTTBC---HHHHHHHHHHHHHHHH
T ss_pred ccceEEEEcCCCCCCC---CHHHHHHHHHHHHHHH
Confidence 4689999999999998 4333333444455544
|
| >2zg6_A Putative uncharacterized protein ST2620, probable 2-haloalkanoic; probable 2-haloalkanoic acid dehalogenase, hydrolase, structural genomics; 2.40A {Sulfolobus tokodaii} | Back alignment and structure |
|---|
Probab=85.59 E-value=0.3 Score=48.70 Aligned_cols=64 Identities=11% Similarity=0.033 Sum_probs=46.7
Q ss_pred HHHHHHHHHHHhhhcCCCcceEEEEeCCch-hHHHHHHccccccCCCCCCCccEEEEEeCC--CccccceEcCChhHHHH
Q 003025 758 KGVVAEKIFTTMAESGRHADFVLCIGDDRS-DEDMFEIIGNATSSGVLSSNASVFACTVGQ--KPSKAKYYLDDAAEVVT 834 (856)
Q Consensus 758 KG~al~~Ll~~l~~~gi~~d~vlaiGD~~N-D~~Mf~~ag~~~~~~~~~~~~~~~av~vG~--~~s~A~y~l~~~~eV~~ 834 (856)
+....+.+++++ |+++ ++|||+.+ |+.+.+.+|.. +|.+.. ......+++++..++.+
T Consensus 152 ~~~~~~~~~~~~---~~~~---~~vgD~~~~Di~~a~~aG~~-------------~i~v~~~~~~~~~~~~i~~l~el~~ 212 (220)
T 2zg6_A 152 NPKIFGFALAKV---GYPA---VHVGDIYELDYIGAKRSYVD-------------PILLDRYDFYPDVRDRVKNLREALQ 212 (220)
T ss_dssp -CCHHHHHHHHH---CSSE---EEEESSCCCCCCCSSSCSEE-------------EEEBCTTSCCTTCCSCBSSHHHHHH
T ss_pred CHHHHHHHHHHc---CCCe---EEEcCCchHhHHHHHHCCCe-------------EEEECCCCCCCCcceEECCHHHHHH
Confidence 345788888988 8887 99999998 99999999863 444432 11122567888999988
Q ss_pred HHHHHH
Q 003025 835 MLEALA 840 (856)
Q Consensus 835 ~L~~L~ 840 (856)
+|..+.
T Consensus 213 ~l~~~~ 218 (220)
T 2zg6_A 213 KIEEMN 218 (220)
T ss_dssp HHHHHC
T ss_pred HHHHhc
Confidence 887753
|
| >1yns_A E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo sapiens} SCOP: c.108.1.22 PDB: 1zs9_A | Back alignment and structure |
|---|
Probab=84.99 E-value=0.77 Score=47.54 Aligned_cols=37 Identities=16% Similarity=0.140 Sum_probs=33.7
Q ss_pred HHHHHHHHHHhhhcCCCcceEEEEeCCchhHHHHHHcccc
Q 003025 759 GVVAEKIFTTMAESGRHADFVLCIGDDRSDEDMFEIIGNA 798 (856)
Q Consensus 759 G~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~ 798 (856)
....+.+++++ |++++++++|||+.+|+..-+.+|..
T Consensus 190 p~~~~~~~~~l---g~~p~~~l~VgDs~~di~aA~~aG~~ 226 (261)
T 1yns_A 190 SESYRKIADSI---GCSTNNILFLTDVTREASAAEEADVH 226 (261)
T ss_dssp HHHHHHHHHHH---TSCGGGEEEEESCHHHHHHHHHTTCE
T ss_pred HHHHHHHHHHh---CcCcccEEEEcCCHHHHHHHHHCCCE
Confidence 47788899999 99999999999999999999999973
|
| >4amg_A Snogd; transferase, polyketide biosynthesis, GT1 family, nogalamyci; HET: MLY; 2.59A {Streptomyces nogalater} PDB: 4an4_A* 4amb_A* | Back alignment and structure |
|---|
Probab=84.98 E-value=0.48 Score=51.78 Aligned_cols=89 Identities=10% Similarity=-0.004 Sum_probs=54.3
Q ss_pred EEEcCCCCHHHHHHHHHhcceeeeccccccCCCcccceeeeecCCCCCCCCCCCCCCCCceEEecCCcc----ccccc--
Q 003025 415 VFIDKPVTLSERAAYYTIAECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIG----CSPSL-- 488 (856)
Q Consensus 415 v~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~g~lV~Se~~G----~~~~l-- 488 (856)
+.+.+.+|+.+ ++..||+||. +-|+| +..|+++++. |+|+--+.+ .+..+
T Consensus 290 v~~~~~~p~~~---lL~~~~~~v~---h~G~~-s~~Eal~~Gv-----------------P~v~~P~~~dQ~~na~~v~~ 345 (400)
T 4amg_A 290 VRVVEWIPLGA---LLETCDAIIH---HGGSG-TLLTALAAGV-----------------PQCVIPHGSYQDTNRDVLTG 345 (400)
T ss_dssp EEEECCCCHHH---HHTTCSEEEE---CCCHH-HHHHHHHHTC-----------------CEEECCC---CHHHHHHHHH
T ss_pred EEEEeecCHHH---Hhhhhhheec---cCCcc-HHHHHHHhCC-----------------CEEEecCcccHHHHHHHHHH
Confidence 34566788765 4678999874 45666 5689999955 777754443 23333
Q ss_pred -CCceeeCCCCHHHHHHHHHHHHcCCHHHHHHHHHHHhhhhhcC
Q 003025 489 -SGAIRVNPWNIEATAEAMHEAIQMNEAEKQLRHEKHYRYVSTH 531 (856)
Q Consensus 489 -~~al~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~ 531 (856)
.-|+.+++ .+.++++|.++|+.+ +-+++.++..+.+...
T Consensus 346 ~G~g~~l~~--~~~~~~al~~lL~d~--~~r~~a~~l~~~~~~~ 385 (400)
T 4amg_A 346 LGIGFDAEA--GSLGAEQCRRLLDDA--GLREAALRVRQEMSEM 385 (400)
T ss_dssp HTSEEECCT--TTCSHHHHHHHHHCH--HHHHHHHHHHHHHHTS
T ss_pred CCCEEEcCC--CCchHHHHHHHHcCH--HHHHHHHHHHHHHHcC
Confidence 22566654 445789999999854 2334444555555443
|
| >2p11_A Hypothetical protein; putative haloacid dehalogenase-like hydrolase, structural GE joint center for structural genomics, JCSG; 2.20A {Burkholderia xenovorans} | Back alignment and structure |
|---|
Probab=84.94 E-value=0.31 Score=49.15 Aligned_cols=16 Identities=31% Similarity=0.561 Sum_probs=14.5
Q ss_pred CCcEEEEEecCCCCCC
Q 003025 589 SKSRAILFDYDGTVMP 604 (856)
Q Consensus 589 s~~rlI~~DlDGTLl~ 604 (856)
+++|+|+||+||||++
T Consensus 9 ~~~k~viFDlDGTL~d 24 (231)
T 2p11_A 9 PHDIVFLFDCDNTLLD 24 (231)
T ss_dssp CCSEEEEECCBTTTBC
T ss_pred CCCeEEEEcCCCCCEe
Confidence 4588999999999998
|
| >4gxt_A A conserved functionally unknown protein; structural genomics, PSI-biology; 1.82A {Anaerococcus prevotii} | Back alignment and structure |
|---|
Probab=83.47 E-value=0.4 Score=53.01 Aligned_cols=38 Identities=11% Similarity=0.204 Sum_probs=33.6
Q ss_pred CCCHHHHHHHHHHHhhCCCeEEEecCCChhhHHHhhcCC
Q 003025 611 APSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSPC 649 (856)
Q Consensus 611 ~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~~ 649 (856)
++.+.+.+.++.| ++.|+.|+||||-....++.+...+
T Consensus 221 r~~p~~~eLi~~L-~~~G~~v~IVSgg~~~~v~~ia~~l 258 (385)
T 4gxt_A 221 RTLDEMVDLYRSL-EENGIDCYIVSASFIDIVRAFATDT 258 (385)
T ss_dssp EECHHHHHHHHHH-HHTTCEEEEEEEEEHHHHHHHHHCT
T ss_pred eeCHHHHHHHHHH-HHCCCeEEEEcCCcHHHHHHHHHHh
Confidence 3679999999997 8899999999999999999998543
|
| >2i6x_A Hydrolase, haloacid dehalogenase-like family; HAD superfamily, struct genomics, PSI-2, protein structure initiative; HET: MSE; 2.40A {Porphyromonas gingivalis} | Back alignment and structure |
|---|
Probab=82.74 E-value=0.32 Score=47.81 Aligned_cols=16 Identities=31% Similarity=0.619 Sum_probs=14.6
Q ss_pred CCcEEEEEecCCCCCC
Q 003025 589 SKSRAILFDYDGTVMP 604 (856)
Q Consensus 589 s~~rlI~~DlDGTLl~ 604 (856)
.++|+|+||+||||++
T Consensus 3 ~m~k~iiFDlDGTL~d 18 (211)
T 2i6x_A 3 AMIRNIVFDLGGVLIH 18 (211)
T ss_dssp CCCSEEEECSBTTTEE
T ss_pred ccceEEEEeCCCeeEe
Confidence 4689999999999998
|
| >2zg6_A Putative uncharacterized protein ST2620, probable 2-haloalkanoic; probable 2-haloalkanoic acid dehalogenase, hydrolase, structural genomics; 2.40A {Sulfolobus tokodaii} | Back alignment and structure |
|---|
Probab=82.24 E-value=0.37 Score=48.08 Aligned_cols=30 Identities=20% Similarity=0.387 Sum_probs=20.4
Q ss_pred CcEEEEEecCCCCCCCCCCCCCCCHHHHHHHHH
Q 003025 590 KSRAILFDYDGTVMPQTSINKAPSQAVISIINT 622 (856)
Q Consensus 590 ~~rlI~~DlDGTLl~~~~~~~~~s~~~~~aL~~ 622 (856)
++|+|+||+||||++ ..........+++++
T Consensus 2 ~~k~viFDlDGTL~d---~~~~~~~~~~~~~~~ 31 (220)
T 2zg6_A 2 KYKAVLVDFGNTLVG---FKPVFYEKVYQVLKD 31 (220)
T ss_dssp CCCEEEECSBTTTEE---EEETTHHHHHHHHHH
T ss_pred CceEEEEcCCCceec---ccccHHHHHHHHHHH
Confidence 368999999999998 444443444444444
|
| >1q92_A 5(3)-deoxyribonucleotidase; alpha-beta rossman fold, hydrolase; HET: DRM; 1.40A {Homo sapiens} SCOP: c.108.1.8 PDB: 1mh9_A* 1q91_A* 1z4m_A* 1z4i_A* 1z4j_A* 1z4l_A* 1z4k_A* 1z4p_X* 1z4q_A* 2jau_A* 2jaw_A* 3u19_A* 3u13_A 4e88_A | Back alignment and structure |
|---|
Probab=80.67 E-value=0.62 Score=45.81 Aligned_cols=16 Identities=19% Similarity=-0.062 Sum_probs=15.0
Q ss_pred CCCcceEEEEeCCchh
Q 003025 773 GRHADFVLCIGDDRSD 788 (856)
Q Consensus 773 gi~~d~vlaiGD~~ND 788 (856)
|++++++++|||+.+|
T Consensus 129 ~~~~~~~~~vgDs~~d 144 (197)
T 1q92_A 129 VLTRDKTVVSADLLID 144 (197)
T ss_dssp EECSCSTTSCCSEEEE
T ss_pred ccCCccEEEECccccc
Confidence 7889999999999998
|
| >2g80_A Protein UTR4; YEL038W, UTR4 protein (unknown transcript 4 protein), struct genomics, PSI, protein structure initiative; 2.28A {Saccharomyces cerevisiae} SCOP: c.108.1.22 | Back alignment and structure |
|---|
Probab=80.39 E-value=1.6 Score=45.04 Aligned_cols=37 Identities=22% Similarity=0.252 Sum_probs=33.4
Q ss_pred HHHHHHHHHHHhhhcCCCcceEEEEeCCchhHHHHHHccc
Q 003025 758 KGVVAEKIFTTMAESGRHADFVLCIGDDRSDEDMFEIIGN 797 (856)
Q Consensus 758 KG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~ 797 (856)
.......+++++ |++|+++++|||+.+|+..-+.+|.
T Consensus 189 ~p~~~~~a~~~l---g~~p~~~l~vgDs~~di~aA~~aG~ 225 (253)
T 2g80_A 189 ETQSYANILRDI---GAKASEVLFLSDNPLELDAAAGVGI 225 (253)
T ss_dssp CHHHHHHHHHHH---TCCGGGEEEEESCHHHHHHHHTTTC
T ss_pred CHHHHHHHHHHc---CCCcccEEEEcCCHHHHHHHHHcCC
Confidence 356778888999 9999999999999999999999986
|
| >3bwv_A Putative 5'(3')-deoxyribonucleotidase; NP_764060.1, deoxyribonucleotidase-like protein; HET: MSE; 1.55A {Staphylococcus epidermidis} | Back alignment and structure |
|---|
Probab=80.10 E-value=0.61 Score=45.00 Aligned_cols=50 Identities=10% Similarity=0.016 Sum_probs=34.9
Q ss_pred ceEEEEeCCchhHHHHHHccccccCCCCCCCccEEEEEeCC-CccccceEcCChhHHHHHHHHHH
Q 003025 777 DFVLCIGDDRSDEDMFEIIGNATSSGVLSSNASVFACTVGQ-KPSKAKYYLDDAAEVVTMLEALA 840 (856)
Q Consensus 777 d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~-~~s~A~y~l~~~~eV~~~L~~L~ 840 (856)
+.+++|||+.+|+. .++| . ++.+..+. ....+.+.+++..++..+|+.+.
T Consensus 129 ~~~l~ieDs~~~i~--~aaG-~-----------~i~~~~~~~~~~~~~~~i~~~~el~~~l~~~~ 179 (180)
T 3bwv_A 129 LADYLIDDNPKQLE--IFEG-K-----------SIMFTASHNVYEHRFERVSGWRDVKNYFNSIE 179 (180)
T ss_dssp CCSEEEESCHHHHH--HCSS-E-----------EEEECCGGGTTCCSSEEECSHHHHHHHHHHHC
T ss_pred cccEEecCCcchHH--HhCC-C-----------eEEeCCCcccCCCCceecCCHHHHHHHHHHhh
Confidence 56899999999974 3343 2 34554332 23457788999999999988764
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 856 | ||||
| d1uqta_ | 456 | c.87.1.6 (A:) Trehalose-6-phosphate synthase, OtsA | 1e-124 | |
| d1u02a_ | 229 | c.108.1.15 (A:) Trehalose-6-phosphate phosphatase | 3e-34 | |
| d1l6ra_ | 225 | c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPa | 2e-09 | |
| d1rkqa_ | 271 | c.108.1.10 (A:) Hypothetical protein YidA {Escheri | 9e-09 | |
| d1wr8a_ | 230 | c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPa | 3e-08 | |
| d1s2oa1 | 244 | c.108.1.10 (A:1-244) Sucrose-phosphatase Slr0953 { | 7e-08 | |
| d1rlma_ | 269 | c.108.1.10 (A:) Sugar phosphatase SupH (YbiV) {Esc | 3e-07 | |
| d2b30a1 | 283 | c.108.1.10 (A:18-300) PFL1270w orthologue {Plasmod | 3e-07 | |
| d2amya1 | 243 | c.108.1.10 (A:4-246) Phosphomannomutase 2 {Human ( | 2e-06 | |
| d2rbka1 | 260 | c.108.1.10 (A:2-261) Sugar-phosphate phosphatase B | 4e-06 | |
| d1nf2a_ | 267 | c.108.1.10 (A:) Hypothetical protein TM0651 {Therm | 2e-05 | |
| d1xvia_ | 232 | c.108.1.10 (A:) Putative mannosyl-3-phosphoglycera | 2e-04 | |
| d1nrwa_ | 285 | c.108.1.10 (A:) Hypothetical protein YwpJ {Bacillu | 7e-04 | |
| d2fuea1 | 244 | c.108.1.10 (A:13-256) Phosphomannomutase 1 {Human | 0.002 |
| >d1uqta_ c.87.1.6 (A:) Trehalose-6-phosphate synthase, OtsA {Escherichia coli [TaxId: 562]} Length = 456 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Trehalose-6-phosphate synthase, OtsA domain: Trehalose-6-phosphate synthase, OtsA species: Escherichia coli [TaxId: 562]
Score = 379 bits (973), Expect = e-124
Identities = 123/486 (25%), Positives = 233/486 (47%), Gaps = 34/486 (6%)
Query: 62 RVIIVANQLPVKAKRRPDNKGWSFSWDEDSLLLQLKDGLPEDMEVIYVGSLKVDVDLSEQ 121
R+++V+N++ + G L + + G + ++ G + E
Sbjct: 2 RLVVVSNRIAPPDEHAASAGG---------LAVGIL-GALKAAGGLWFGWSGETGN--ED 49
Query: 122 DDVSQLLLDRFKCVPAFLPPDILTKFYHGFCKQHLWPLFHYMLPFSATHGGRFDRSLWEA 181
+ ++ L L ++Y+ F LWP FHY L +F R W+
Sbjct: 50 QPLKKVKKGNITWASFNLSEQDLDEYYNQFSNAVLWPAFHYRLDLV-----QFQRPAWDG 104
Query: 182 YVSANKIFSQRVIEVINPEDDYVWIHDYHLMVLPTFLRRRFTRLRMGFFLHSPFPSSEIY 241
Y+ N + + +++ ++ DD +WIHDYHL+ LR+R R+GFFLH PFP+ EI+
Sbjct: 105 YLRVNALLADKLLPLLQD-DDIIWIHDYHLLPFAHELRKRGVNNRIGFFLHIPFPTPEIF 163
Query: 242 RTLPVREEILKALLNADLIGFHTFDYARHFLSCCSRMLGLEYQSKRGYIGLEYYGRTVGI 301
LP + +L+ L + DL+GF T + FL C S + + +S + + +G+
Sbjct: 164 NALPTYDTLLEQLCDYDLLGFQTENDRLAFLDCLSNLTRVTTRSAKSHT---AWGKAFRT 220
Query: 302 KIMPVGIHMGQIESVLRLADKDWRVQELKQQFEGKTVLLGVDDMDIFKGVDLKLLAMEHL 361
++ P+GI +I ++ +LK + + + V+ +D KG+ + LA E L
Sbjct: 221 EVYPIGIEPKEIAKQAA-GPLPPKLAQLKAELKNVQNIFSVERLDYSKGLPERFLAYEAL 279
Query: 362 LKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDKPV 421
L+++P+ G+ QIA +RG + ++I+ ++ RIN +G+ G+ P+ ++++
Sbjct: 280 LEKYPQHHGKIRYTQIAPTSRGDVQAYQDIRHQLENEAGRINGKYGQLGWTPLYYLNQHF 339
Query: 422 TLSERAAYYTIAECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEF 481
+ ++ +VT +RDGMNL EY+ + +LV+S+F
Sbjct: 340 DRKLLMKIFRYSDVGLVTPLRDGMNLVAKEYVAAQDPA------------NPGVLVLSQF 387
Query: 482 IGCSPSLSGAIRVNPWNIEATAEAMHEAIQMNEAEKQLRHEKHYRYVSTHDVAYWARSFF 541
G + L+ A+ VNP++ + A A+ A+ M+ AE+ RH + + +D+ +W F
Sbjct: 388 AGAANELTSALIVNPYDRDEVAAALDRALTMSLAERISRHAEMLDVIVKNDINHWQECFI 447
Query: 542 QDMERT 547
D+++
Sbjct: 448 SDLKQI 453
|
| >d1u02a_ c.108.1.15 (A:) Trehalose-6-phosphate phosphatase related protein {Archaeon Thermoplasma acidophilum [TaxId: 2303]} Length = 229 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Trehalose-phosphatase domain: Trehalose-6-phosphate phosphatase related protein species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Score = 128 bits (323), Expect = 3e-34
Identities = 48/250 (19%), Positives = 89/250 (35%), Gaps = 31/250 (12%)
Query: 594 ILFDYDGTVMP--QTSINKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSPCKK 651
I DYDGT++P ++S+I+ L R ++V+GR + + ++
Sbjct: 3 IFLDYDGTLVPIIMNPEESYADAGLLSLISDLK--ERFDTYIVTGRSPEEISRFLPLDI- 59
Query: 652 LGIAAEHGYFMRWSADEEWQNCGQSVDFGWIQIAEPVMKLYTESTDGSYIEIKESALVWH 711
+ HG + N G G + + G I K A+++H
Sbjct: 60 -NMICYHGACS-KINGQIVYNNGSDRFLGVFDRIYEDTRSWVSDFPGLRIYRKNLAVLYH 117
Query: 712 HRDADPGFGSSQAKELLDHLESVLANEPAAVKSGQFIVEVKPQGVSKGVVAEKIFTTMAE 771
+L +E + G+ I+E++ GV+KG +
Sbjct: 118 LGLMGAD----MKPKLRSRIEEIARIFGVETYYGKMIIELRVPGVNKGSAIRSVR----- 168
Query: 772 SGRHADFVLCIGDDRSDEDMFEIIGNATSSGVLSSNASVFACTVGQKPSKAKYYLDDAAE 831
+ GDD +DE FE +A VG+ + AK+++ D E
Sbjct: 169 ---GERPAIIAGDDATDEAAFEANDDA------------LTIKVGEGETHAKFHVADYIE 213
Query: 832 VVTMLEALAE 841
+ +L+ +
Sbjct: 214 MRKILKFIEM 223
|
| >d1l6ra_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Archaeon Thermoplasma acidophilum [TaxId: 2303]} Length = 225 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Score = 56.5 bits (135), Expect = 2e-09
Identities = 38/218 (17%), Positives = 72/218 (33%), Gaps = 25/218 (11%)
Query: 592 RAILFDYDGTVMPQTSINKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSPCKK 651
R D DG + T ++ S I I + TV ++SG + ++
Sbjct: 4 RLAAIDVDGNL---TDRDRLISTKAIESIRSA-EKKGLTVSLLSGN---VIPVVYALKIF 56
Query: 652 LGIAAEHGYFMRWSADEEWQNCGQSVDFGWIQIAEPVMKLYTESTDGSYIEIKESALVWH 711
LGI +G + + N G F + ++ ++ T I
Sbjct: 57 LGI---NGPVFGENGGIMFDNDGSIKKFFSNEGTNKFLEEMSKRTSMRSI--------LT 105
Query: 712 HRDADPGFGSSQAKELLDHLESVLANEPAAVKSGQFIVEVKPQGVSKGVVAEKIFTTMAE 771
+R + G E +D++ + + + + +G K K+
Sbjct: 106 NRWREASTGFDIDPEDVDYVRKEAESRGFVIFYSGYSWHLMNRGEDKAFAVNKLKEMY-- 163
Query: 772 SGRHADFVLCIGDDRSDEDMFEIIGNATSSGVLSSNAS 809
D +L IGD +D MF++ +NA+
Sbjct: 164 -SLEYDEILVIGDSNNDMPMFQLPVR----KACPANAT 196
|
| >d1rkqa_ c.108.1.10 (A:) Hypothetical protein YidA {Escherichia coli [TaxId: 562]} Length = 271 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YidA species: Escherichia coli [TaxId: 562]
Score = 55.0 bits (131), Expect = 9e-09
Identities = 47/249 (18%), Positives = 83/249 (33%), Gaps = 42/249 (16%)
Query: 592 RAILFDYDGTVMPQTSINKAPSQAVISIINTLCNDARNTVFVVSGRG----RDCLGKWFS 647
+ I D DGT++ + S AV + I V + +GR + L +
Sbjct: 5 KLIAIDMDGTLLLP---DHTISPAVKNAIAAAR-ARGVNVVLTTGRPYAGVHNYLKELHM 60
Query: 648 PCKKLGIAAEHGYFMRWSA------------DEEWQNCGQSVDFGWIQIAEPVMKLYTES 695
+G ++ +A D+ S + G A LYT +
Sbjct: 61 EQPGDYCITYNGALVQKAADGSTVAQTALSYDDYRFLEKLSREVGSHFHALDRTTLYTAN 120
Query: 696 TDGSYIEIKESAL------VWHHRDADPGF---------GSSQAKELLDHLESVLANEPA 740
D SY + ES + DP + + + + + +
Sbjct: 121 RDISYYTVHESFVATIPLVFCEAEKMDPNTQFLKVMMIDEPAILDQAIARIPQEVKEKYT 180
Query: 741 AVKSGQFIVEVKPQGVSKGVVAEKIFTTMAESGRHADFVLCIGDDRSDEDMFEIIGNATS 800
+KS + +E+ + V+KG + + G + ++ IGD +D M E G
Sbjct: 181 VLKSAPYFLEILDKRVNKG---TGVKSLADVLGIKPEEIMAIGDQENDIAMIEYAGV--- 234
Query: 801 SGVLSSNAS 809
GV NA
Sbjct: 235 -GVAVDNAI 242
|
| >d1wr8a_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Pyrococcus horikoshii [TaxId: 53953]} Length = 230 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Pyrococcus horikoshii [TaxId: 53953]
Score = 53.1 bits (126), Expect = 3e-08
Identities = 35/220 (15%), Positives = 69/220 (31%), Gaps = 23/220 (10%)
Query: 590 KSRAILFDYDGTVMPQTSINKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSPC 649
K +AI D DGT+ T N+ + + I + +V+G
Sbjct: 1 KIKAISIDIDGTI---TYPNRMIHEKALEAIRRA-ESLGIPIMLVTGNTVQFAEAASILI 56
Query: 650 KKLGIAAEHGYFMRWSADEEWQNCGQSVDFGWIQIAEPVMKLYTESTDGSYIEIKESALV 709
G + + + + + + + K + + + + + LV
Sbjct: 57 ---GTSGPVVAEDGGAISYKKKRIFLASMDEEWILWNEIRKRFPNARTSYTMPDRRAGLV 113
Query: 710 WHHRDADPGFGSSQAKELLDHLESVLANEPAAVKSGQFIVEVKPQGVSKGVVAEKIFTTM 769
+ +E+++ L N F + VK ++KG I
Sbjct: 114 IMRETINV----ETVREIINEL-----NLNLVAVDSGFAIHVKKPWINKG---SGIEKAS 161
Query: 770 AESGRHADFVLCIGDDRSDEDMFEIIGNATSSGVLSSNAS 809
G V +GD +D D F+++G V + A
Sbjct: 162 EFLGIKPKEVAHVGDGENDLDAFKVVGY----KVAVAQAP 197
|
| >d1s2oa1 c.108.1.10 (A:1-244) Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc 6803 [TaxId: 1148]} Length = 244 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sucrose-phosphatase Slr0953 species: Synechocystis sp. pcc 6803 [TaxId: 1148]
Score = 51.9 bits (123), Expect = 7e-08
Identities = 40/256 (15%), Positives = 78/256 (30%), Gaps = 24/256 (9%)
Query: 590 KSRAILFDYDGTVMPQTSINKAPSQAVISIINTLCNDARN--TVFVVSGRGRDC---LGK 644
+ ++ D D T + Q + + D R + +GR L K
Sbjct: 2 RQLLLISDLDNTWVG--------DQQALEHLQEYLGDRRGNFYLAYATGRSYHSARELQK 53
Query: 645 WFSPCKKLGIAAEHGYFMRWSADEEWQNCGQSVDFGWIQIAEPVMKLYTESTDGSYIEIK 704
+ G + + + I + + + S +E
Sbjct: 54 QVGLMEPDYWLTAVGSEIYHPEGLDQHWADYLSEHWQRDILQAIADGFEALKPQSPLEQN 113
Query: 705 ESALVWHHRDADPGFGSSQAKELLDHLESVLANEPAAVKSGQFIVEVKPQGVSKGVVAEK 764
+ +H Q E+L + + S V++ PQ +KG +
Sbjct: 114 PWKISYHLDPQACPTVIDQLTEMLKETGIPVQV----IFSSGKDVDLLPQRSNKGNATQY 169
Query: 765 IFTTMAESGRHADFVLCIGDDRSDEDMFEIIGNATSSGVLSSNASVFACTVGQKPSKAKY 824
+ +A L GD +D +FE GV+ NA + +++
Sbjct: 170 LQQHLAMEPSQ---TLVCGDSGNDIGLFETSAR----GVIVRNAQPELLHWYDQWGDSRH 222
Query: 825 YLDDAAEVVTMLEALA 840
Y ++ +LEA+A
Sbjct: 223 YRAQSSHAGAILEAIA 238
|
| >d1rlma_ c.108.1.10 (A:) Sugar phosphatase SupH (YbiV) {Escherichia coli [TaxId: 562]} Length = 269 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sugar phosphatase SupH (YbiV) species: Escherichia coli [TaxId: 562]
Score = 50.3 bits (119), Expect = 3e-07
Identities = 38/243 (15%), Positives = 69/243 (28%), Gaps = 35/243 (14%)
Query: 592 RAILFDYDGTVMPQTSINKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSPCKK 651
+ I+ D DGT + ++ L V SG L +F K
Sbjct: 3 KVIVTDMDGTFL--NDAKTYNQPRFMAQYQEL-KKRGIKFVVASGNQYYQLISFFPELKD 59
Query: 652 LGIAAEHGYFMRWSADEEWQNCGQSVDFGWIQIAE----PVMKLYTESTDGSYI-----E 702
+ + ++ + + I I E + +Y+ E
Sbjct: 60 EISFVAENGALVYEHGKQLFHGELTRHESRIVIGELLKDKQLNFVACGLQSAYVSENAPE 119
Query: 703 IKESALVWHHRDADP----------------GFGSSQAKELLDHLESVLANEPAAVKSGQ 746
+ + H+ P Q ++D L L V SG
Sbjct: 120 AFVALMAKHYHRLKPVKDYQEIDDVLFKFSLNLPDEQIPLVIDKLHVALDGIMKPVTSGF 179
Query: 747 FIVEVKPQGVSKGVVAEKIFTTMAESGRHADFVLCIGDDRSDEDMFEIIGNATSSGVLSS 806
+++ G+ K A I + V+ IGD +D +M ++
Sbjct: 180 GFIDLIIPGLHK---ANGISRLLKRWDLSPQNVVAIGDSGNDAEMLKMARY----SFAMG 232
Query: 807 NAS 809
NA+
Sbjct: 233 NAA 235
|
| >d2b30a1 c.108.1.10 (A:18-300) PFL1270w orthologue {Plasmodium vivax [TaxId: 5855]} Length = 283 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: PFL1270w orthologue species: Plasmodium vivax [TaxId: 5855]
Score = 50.4 bits (119), Expect = 3e-07
Identities = 33/252 (13%), Positives = 66/252 (26%), Gaps = 44/252 (17%)
Query: 592 RAILFDYDGTVMPQTSINKAPSQAVISIINTLCNDARNTVFVVSGRGR-------DCLGK 644
+ +L D+DGT+ + I I + V + +GR +
Sbjct: 11 KLLLIDFDGTLF--VDKDIKVPSENIDAIKEA-IEKGYMVSICTGRSKVGILSAFGEENL 67
Query: 645 WFSPCKKLGIAAEHGYFMRWSADEEWQNCGQSVDFGWIQIA-----EPVMKLYTESTDGS 699
+ +G + + D I+ V + + +
Sbjct: 68 KKMNFYGMPGVYINGTIVYDQIGYTLLDETIETDVYAELISYLVEKNLVNQTIFHRGESN 127
Query: 700 YIEIKESALVWHHRDADPGFG----------------------SSQAKELLDHLESVLAN 737
Y+ + + S++K ++ +L+ N
Sbjct: 128 YVTEDNKYADFLQKMYSENRSIIIRHNEMLKYRTMNKLMIVLDPSESKTVIGNLKQKFKN 187
Query: 738 EPAAVKSGQFIVEVKPQGVSKGVVAEKIFTTMAESGRHADFVLCIGDDRSDEDMFEIIGN 797
+ + EV G K I + D VL +GD +D M
Sbjct: 188 KLTIFTTYNGHAEVTKLGHDKY---TGINYLLKHYNISNDQVLVVGDAENDIAMLSNFKY 244
Query: 798 ATSSGVLSSNAS 809
+NA+
Sbjct: 245 ----SFAVANAT 252
|
| >d2amya1 c.108.1.10 (A:4-246) Phosphomannomutase 2 {Human (Homo sapiens) [TaxId: 9606]} Length = 243 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphomannomutase 2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 48.1 bits (113), Expect = 2e-06
Identities = 33/231 (14%), Positives = 55/231 (23%), Gaps = 36/231 (15%)
Query: 592 RAILFDYDGTVMPQTSINKAPSQAVISIINTLCNDARNTVFVVSGRGRDC----LGKWFS 647
LFD DGT+ + ++ + + L + + VV G + LG
Sbjct: 4 ALCLFDVDGTLTAP---RQKITKEMDDFLQKLR--QKIKIGVVGGSDFEKVQEQLGNDVV 58
Query: 648 PCKKLGIAAEHGYFMRWSADEEWQNCGQSVDFGWIQIA-----EPVMKLYTESTDGSYIE 702
+ QN + IQ + K+ G++IE
Sbjct: 59 EKYDYVFPENGLVAYKDGKLLCRQNIQSHLGEALIQDLINYCLSYIAKIKLPKKRGTFIE 118
Query: 703 IKESALVWHHRDADPGFGSSQAKELLDH------------LESVLANEPAAVKSGQFIVE 750
+ L LD + GQ +
Sbjct: 119 FRNGMLNVSPIGRSCSQEERIEFYELDKKENIRQKFVADLRKEFAGKGLTFSIGGQISFD 178
Query: 751 VKPQGVSKGVVAEKIFTTMAESGRHADFVLCIGDDRS----DEDMFEIIGN 797
V P G K + + GD D ++F
Sbjct: 179 VFPDGWDKRYCLRHV------ENDGYKTIYFFGDKTMPGGNDHEIFTDPRT 223
|
| >d2rbka1 c.108.1.10 (A:2-261) Sugar-phosphate phosphatase BT4131 {Bacteroides thetaiotaomicron [TaxId: 818]} Length = 260 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sugar-phosphate phosphatase BT4131 species: Bacteroides thetaiotaomicron [TaxId: 818]
Score = 46.8 bits (110), Expect = 4e-06
Identities = 34/246 (13%), Positives = 67/246 (27%), Gaps = 42/246 (17%)
Query: 591 SRAILFDYDGTVMPQTSINKAPSQAVISIINTLCNDARNTVFVVSGRGRDC------LGK 644
++A+ FD DGT++ + + I + + +F+ +GR + L
Sbjct: 1 TKALFFDIDGTLV--SFETHRIPSSTIEALEAA-HAKGLKIFIATGRPKAIINNLSELQD 57
Query: 645 WFSPCKKLG-------IAAEHGYFMRWSADEEWQNCGQSVDFGWIQIAEPVMKLYTESTD 697
+ + E Y +E G I + +
Sbjct: 58 RNLIDGYITMNGAYCFVGEEVIYKSAIPQEEVKAMAAFCEKKGVPCIFVEEHNISVCQPN 117
Query: 698 GSYIEIKESALVWHHRDAD--------------PGFGSSQAKELLDHLESVLANEPAAVK 743
+I L + P + KE+L + + +
Sbjct: 118 EMVKKIFYDFLHVNVIPTVSFEEASNKEVIQMTPFITEEEEKEVLPSIPTC-----EIGR 172
Query: 744 SGQFIVEVKPQGVSKGVVAEKIFTTMAESGRHADFVLCIGDDRSDEDMFEIIGNATSSGV 803
+V +G +K ++I G + + GD +D M GV
Sbjct: 173 WYPAFADVTAKGDTKQKGIDEIIRHF---GIKLEETMSFGDGGNDISMLRHAAI----GV 225
Query: 804 LSSNAS 809
A
Sbjct: 226 AMGQAK 231
|
| >d1nf2a_ c.108.1.10 (A:) Hypothetical protein TM0651 {Thermotoga maritima [TaxId: 2336]} Length = 267 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein TM0651 species: Thermotoga maritima [TaxId: 2336]
Score = 44.6 bits (104), Expect = 2e-05
Identities = 43/245 (17%), Positives = 68/245 (27%), Gaps = 39/245 (15%)
Query: 592 RAILFDYDGTVMPQTSINKAPSQAVISIINTLCNDARNTVFVVSGRG-------RDCLGK 644
R +FD DGT++ N S+ I L + V SGR K
Sbjct: 3 RVFVFDLDGTLLND---NLEISEKDRRNIEKL--SRKCYVVFASGRMLVSTLNVEKKYFK 57
Query: 645 WFSPCKKLGIAA------EHGYFMRWSADEEWQNCGQSVDFGWIQIAEPVMKLYTESTDG 698
P A + + A LY+E +
Sbjct: 58 RTFPTIAYNGAIVYLPEEGVILNEKIPPEVAKDIIEYIKPLNVHWQAYIDDVLYSEKDNE 117
Query: 699 SYIEIKESALVWHHRDADPGFGSSQ--------------AKELLDHLESVLANEPAAVKS 744
+ V + + + S+ EL + L + KS
Sbjct: 118 EIKSYARHSNVDYRVEPNLSELVSKMGTTKLLLIDTPERLDELKEILSERFKDVVKVFKS 177
Query: 745 GQFIVEVKPQGVSKGVVAEKIFTTMAESGRHADFVLCIGDDRSDEDMFEIIGNATSSGVL 804
+E+ P+ V KG + + ++ GD+ +D MFE G V
Sbjct: 178 FPTYLEIVPKNVDKGKALRFL---RERMNWKKEEIVVFGDNENDLFMFEEAGL----RVA 230
Query: 805 SSNAS 809
NA
Sbjct: 231 MENAI 235
|
| >d1xvia_ c.108.1.10 (A:) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Escherichia coli [TaxId: 562]} Length = 232 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) species: Escherichia coli [TaxId: 562]
Score = 41.6 bits (96), Expect = 2e-04
Identities = 26/221 (11%), Positives = 54/221 (24%), Gaps = 22/221 (9%)
Query: 594 ILFDYDGTVMPQTSINKAPSQAVISIINTLCNDARNTVFVVSGRGR-------------- 639
+ D DGT++ + Q + L +A V + S +
Sbjct: 7 VFSDLDGTLLDS---HSYDWQPAAPWLTRL-REANVPVILCSSKTSAEMLYLQKTLGLQG 62
Query: 640 ----DCLGKWFSPCKKLGIAAEHGYFMRWSADEEWQNCGQSVDFGWIQIAEPVMKLYTES 695
G ++ + + E ++ + +
Sbjct: 63 LPLIAENGAVIQLAEQWQEIDGFPRIISGISHGEISLVLNTLREKEHFKFTTFDDVDDAT 122
Query: 696 TDGSYIEIKESALVWHHRDADPGFGSSQAKELLDHLESVLANEPAAVKSGQFIVEVKPQG 755
+ A + +A + E + + L G V
Sbjct: 123 IAEWTGLSRSQAALTQLHEASVTLIWRDSDERMAQFTARLNELGLQFMQGARFWHVLDAS 182
Query: 756 VSKGVVAEKIFTTMAESGRHADFVLCIGDDRSDEDMFEIIG 796
K A I T + L +GD +D + E++
Sbjct: 183 AGKDQAANWIIATYQQLSGKRPTTLGLGDGPNDAPLLEVMD 223
|
| >d1nrwa_ c.108.1.10 (A:) Hypothetical protein YwpJ {Bacillus subtilis [TaxId: 1423]} Length = 285 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YwpJ species: Bacillus subtilis [TaxId: 1423]
Score = 40.3 bits (93), Expect = 7e-04
Identities = 39/268 (14%), Positives = 70/268 (26%), Gaps = 61/268 (22%)
Query: 592 RAILFDYDGTVMPQTSINKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSPCKK 651
+ I D DGT++ S + + V V +GR + F P
Sbjct: 2 KLIAIDLDGTLLNS---KHQVSLENENALRQA-QRDGIEVVVSTGRAHFDVMSIFEPLGI 57
Query: 652 LGIAAEHGYFMRWSADEEWQNCGQSVDFGWIQIAEPVMK------------LYTESTDGS 699
+ + + I + +YT
Sbjct: 58 KTWVISANGAVIHDPEGRLYHHETIDKKRAYDILSWLESENYYYEVFTGSAIYTPQNGRE 117
Query: 700 YIEI---------KESALVWHHRDADPGFGSSQAKELLDHLESVLANEPA---------- 740
+++ E+ L + A+ + S + E A+EP
Sbjct: 118 LLDVELDRFRSANPEADLSVLKQAAEVQYSQSGFAYINSFQELFEADEPIDFYNILGFSF 177
Query: 741 -------------------AVKSGQFIVEVKPQGVSKGVVAEKIFTTMAESGRHADFVLC 781
V S + E+ + SKG + + + +
Sbjct: 178 FKEKLEAGWKRYEHAEDLTLVSSAEHNFELSSRKASKG---QALKRLAKQLNIPLEETAA 234
Query: 782 IGDDRSDEDMFEIIGNATSSGVLSSNAS 809
+GD +D+ M E G GV NA
Sbjct: 235 VGDSLNDKSMLEAAGK----GVAMGNAR 258
|
| >d2fuea1 c.108.1.10 (A:13-256) Phosphomannomutase 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 244 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphomannomutase 1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 38.5 bits (88), Expect = 0.002
Identities = 36/231 (15%), Positives = 63/231 (27%), Gaps = 38/231 (16%)
Query: 594 ILFDYDGTVMPQTSINKAPSQAVISIINTLCNDARNTVFVVSGRGRDCL----GKWFSPC 649
LFD DGT+ P + V + + L +R + VV G + G
Sbjct: 4 CLFDVDGTLTPA---RQKIDPEVAAFLQKLR--SRVQIGVVGGSDYCKIAEQLGDGDEVI 58
Query: 650 KKLGIAAEHGYFMRWSADEEWQNCGQSVDFGWIQIA-------EPVMKLYTESTDGSYIE 702
+K +++ G + + L G++IE
Sbjct: 59 EKFDYVFAENGTVQYKHGRLLSKQTIQNHLGEELLQDLINFCLSYMALLRLPKKRGTFIE 118
Query: 703 IKESALVWHHRDADPGFGSSQAKELLDHLESVLANEPAAVK------------SGQFIVE 750
+ L LD E + A+K G +
Sbjct: 119 FRNGMLNISPIGRSCTLEERIEFSELDKKEKIREKFVEALKTEFAGKGLRFSRGGMISFD 178
Query: 751 VKPQGVSKGVVAEKIFTTMAESGRHADFVLCIGDDRS----DEDMFEIIGN 797
V P+G K + + D + G++ S D ++F
Sbjct: 179 VFPEGWDKRYCLDSL------DQDSFDTIHFFGNETSPGGNDFEIFADPRT 223
|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 856 | |||
| d1uqta_ | 456 | Trehalose-6-phosphate synthase, OtsA {Escherichia | 100.0 | |
| d1u02a_ | 229 | Trehalose-6-phosphate phosphatase related protein | 99.97 | |
| d1rlma_ | 269 | Sugar phosphatase SupH (YbiV) {Escherichia coli [T | 99.94 | |
| d1nf2a_ | 267 | Hypothetical protein TM0651 {Thermotoga maritima [ | 99.93 | |
| d1nrwa_ | 285 | Hypothetical protein YwpJ {Bacillus subtilis [TaxI | 99.93 | |
| d1rkqa_ | 271 | Hypothetical protein YidA {Escherichia coli [TaxId | 99.93 | |
| d2rbka1 | 260 | Sugar-phosphate phosphatase BT4131 {Bacteroides th | 99.92 | |
| d2b30a1 | 283 | PFL1270w orthologue {Plasmodium vivax [TaxId: 5855 | 99.91 | |
| d1wr8a_ | 230 | Phosphoglycolate phosphatase, PGPase {Pyrococcus h | 99.91 | |
| d1l6ra_ | 225 | Phosphoglycolate phosphatase, PGPase {Archaeon The | 99.9 | |
| d1rzua_ | 477 | Glycogen synthase 1, GlgA {Agrobacterium tumefacie | 99.89 | |
| d2bisa1 | 437 | Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxI | 99.89 | |
| d1wzca1 | 243 | Putative mannosyl-3-phosphoglycerate phosphatase M | 99.87 | |
| d1s2oa1 | 244 | Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc | 99.87 | |
| d1xvia_ | 232 | Putative mannosyl-3-phosphoglycerate phosphatase M | 99.86 | |
| d2bfwa1 | 196 | Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxI | 99.83 | |
| d2amya1 | 243 | Phosphomannomutase 2 {Human (Homo sapiens) [TaxId: | 99.82 | |
| d2fuea1 | 244 | Phosphomannomutase 1 {Human (Homo sapiens) [TaxId: | 99.78 | |
| d2iw1a1 | 370 | Lipopolysaccharide core biosynthesis protein RfaG | 99.76 | |
| d2f9fa1 | 166 | First mannosyl transferase WbaZ {Archaeoglobus ful | 99.61 | |
| d1rkua_ | 206 | Homoserine kinase ThrH {Pseudomonas aeruginosa [Ta | 99.38 | |
| d1k1ea_ | 177 | Probable phosphatase YrbI {Haemophilus influenzae, | 99.03 | |
| d1j97a_ | 210 | Phosphoserine phosphatase {Archaeon Methanococcus | 99.02 | |
| d2c4na1 | 250 | NagD {Escherichia coli [TaxId: 562]} | 98.75 | |
| d1vjra_ | 261 | Hypothetical protein TM1742 {Thermotoga maritima [ | 98.72 | |
| d1yv9a1 | 253 | Putative hydrolase EF1188 {Enterococcus faecalis [ | 98.72 | |
| d2feaa1 | 226 | 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate | 98.66 | |
| d2ah5a1 | 210 | predicted phosphatase SP0104 {Streptococcus pneumo | 98.34 | |
| d1nnla_ | 217 | Phosphoserine phosphatase {Human (Homo sapiens) [T | 98.33 | |
| d2hcfa1 | 228 | Hypothetical protein CT1708 {Chlorobium tepidum [T | 98.28 | |
| d2gmwa1 | 182 | D,D-heptose 1,7-bisphosphate phosphatase GmhB {Esc | 98.26 | |
| d1wvia_ | 253 | Putative phosphatase SMU.1415c {Streptococcus muta | 98.26 | |
| d2hsza1 | 224 | Phosphoglycolate phosphatase Gph {Haemophilus somn | 98.25 | |
| d1u7pa_ | 164 | Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mu | 98.07 | |
| d2o2xa1 | 209 | Hypothetical protein Mll2559 {Mesorhizobium loti [ | 98.06 | |
| d2go7a1 | 204 | Hypothetical protein SP2064 {Streptococcus pneumon | 97.99 | |
| d2hdoa1 | 207 | Phosphoglycolate phosphatase {Lactobacillus planta | 97.92 | |
| d1te2a_ | 218 | Phosphatase YniC {Escherichia coli [TaxId: 562]} | 97.86 | |
| d1swva_ | 257 | Phosphonoacetaldehyde hydrolase {Bacillus cereus [ | 97.81 | |
| d1x42a1 | 230 | Hypothetical protein PH0459 {Archaeon Pyrococcus h | 97.72 | |
| d2fpwa1 | 161 | Histidine biosynthesis bifunctional protein HisB, | 97.71 | |
| d2gfha1 | 247 | N-acylneuraminate-9-phosphatase NANP {Mouse (Mus m | 97.68 | |
| d2b8ea1 | 135 | Cation-transporting ATPase {Archaeon Archaeoglobus | 97.66 | |
| d1ltqa1 | 149 | Polynucleotide kinase, phosphatase domain {Bacteri | 97.57 | |
| d1o08a_ | 221 | beta-Phosphoglucomutase {Lactococcus lactis [TaxId | 97.55 | |
| d1wpga2 | 168 | Calcium ATPase, catalytic domain P {Rabbit (Orycto | 97.28 | |
| d1xpja_ | 124 | Hypothetical protein VC0232 {Vibrio cholerae [TaxI | 97.27 | |
| d2obba1 | 122 | Hypothetical protein BT0820 {Bacteroides thetaiota | 97.2 | |
| d1cr6a1 | 222 | Epoxide hydrolase, N-terminal domain {Mouse (Mus m | 96.87 | |
| d2fi1a1 | 187 | Putative hydrolase SP0805 {Streptococcus pneumonia | 96.46 | |
| d1qyia_ | 380 | Hypothetical protein MW1667 (SA1546) {Staphylococc | 95.57 | |
| d2fdra1 | 222 | Hypothetical protein Atu0790 {Agrobacterium tumefa | 95.26 | |
| d1qq5a_ | 245 | L-2-Haloacid dehalogenase, HAD {Xanthobacter autot | 94.09 | |
| d1yj5a1 | 195 | 5' polynucleotide kinase-3' phosphatase, middle do | 93.73 | |
| d2b82a1 | 209 | Class B acid phosphatase, AphA {Escherichia coli [ | 93.13 | |
| d1zrna_ | 220 | L-2-Haloacid dehalogenase, HAD {Pseudomonas sp., s | 92.74 | |
| d1v4va_ | 373 | UDP-N-acetylglucosamine 2-epimerase {Thermus therm | 92.47 | |
| d1zs9a1 | 253 | E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]} | 90.52 | |
| d1zs9a1 | 253 | E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]} | 89.26 | |
| d2b0ca1 | 197 | Putative phosphatase YihX {Escherichia coli [TaxId | 88.11 | |
| d1pn3a_ | 391 | TDP-epi-vancosaminyltransferase GtfA {Amycolatopsi | 87.53 | |
| d1zd3a1 | 225 | Epoxide hydrolase, N-terminal domain {Human (Homo | 85.92 | |
| d1iira_ | 401 | UDP-glucosyltransferase GtfB {Amycolatopsis orient | 82.86 | |
| d1rrva_ | 401 | TDP-vancosaminyltransferase GftD {Amycolatopsis or | 81.79 | |
| d1qq5a_ | 245 | L-2-Haloacid dehalogenase, HAD {Xanthobacter autot | 80.87 |
| >d1uqta_ c.87.1.6 (A:) Trehalose-6-phosphate synthase, OtsA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Trehalose-6-phosphate synthase, OtsA domain: Trehalose-6-phosphate synthase, OtsA species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=9.9e-100 Score=871.94 Aligned_cols=453 Identities=27% Similarity=0.537 Sum_probs=418.1
Q ss_pred CeEEEEEcCCccceeecCCCCCeEEEecCCchHHhhhccCCCCCceEEEEccCCCCCcchhhhHHHhhccCeeEEEeeCC
Q 003025 61 DRVIIVANQLPVKAKRRPDNKGWSFSWDEDSLLLQLKDGLPEDMEVIYVGSLKVDVDLSEQDDVSQLLLDRFKCVPAFLP 140 (856)
Q Consensus 61 ~~~iivsnrlP~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~wvg~~~~~~~~~~~~~~~~~~~~~~~~~pv~l~ 140 (856)
+||||||||+|+...+. .++|||+++|.+.+. +.+++||||+|.+.++.+ .+......+|+|+||+|+
T Consensus 1 srlivvsnr~~~~~~~~---------~~~gGl~~al~~~~~-~~~g~Wvgw~g~~~~~~~--~~~~~~~~~~~~~~v~l~ 68 (456)
T d1uqta_ 1 SRLVVVSNRIAPPDEHA---------ASAGGLAVGILGALK-AAGGLWFGWSGETGNEDQ--PLKKVKKGNITWASFNLS 68 (456)
T ss_dssp CCEEEEEEECCCCC-------------CCCHHHHHHHHHHH-HHCEEEEEEEEEESCCSS--CCEEEEETTEEEEEEEEC
T ss_pred CCEEEEECCCCCCCCCC---------CCCccHHHHhHHHHh-hCCCEEEecCCCCCcccc--hhhhhhccCceeEEecCC
Confidence 58999999999977543 346899999987554 579999999997654322 223334678999999999
Q ss_pred hhhhhhHhhccccccccccccccCCCCCCCCCCcChHhHHHHHHHHHHHHHHHHHHcCCCCCEEEEeCcccchHHHHHHh
Q 003025 141 PDILTKFYHGFCKQHLWPLFHYMLPFSATHGGRFDRSLWEAYVSANKIFSQRVIEVINPEDDYVWIHDYHLMVLPTFLRR 220 (856)
Q Consensus 141 ~~~~~~~y~gf~~~~lWpl~H~~~~~~~~~~~~~~~~~w~~Y~~vN~~fa~~i~~~~~~~~D~VwihDyhl~llp~~lr~ 220 (856)
++++++||+||||++|||+|||+++. .+|++++|++|++||+.||++|.+.+++ +|+||||||||+++|.+||+
T Consensus 69 ~~~~~~~Y~gf~n~~LWpl~H~~~~~-----~~~~~~~~~~Y~~vN~~fA~~l~~~~~~-~d~iwvhDyhl~llp~~lR~ 142 (456)
T d1uqta_ 69 EQDLDEYYNQFSNAVLWPAFHYRLDL-----VQFQRPAWDGYLRVNALLADKLLPLLQD-DDIIWIHDYHLLPFAHELRK 142 (456)
T ss_dssp HHHHHHHTTTHHHHTHHHHHTTCGGG-----CCCCHHHHHHHHHHHHHHHHHHGGGCCT-TCEEEEESGGGTTHHHHHHH
T ss_pred HHHHHHHHHHhhhccccccccCcccc-----ccccHHHHHHHHHHHHHHHHHHHHhccC-CCeEEEeccchhhhHHHHHH
Confidence 99999999999999999999999876 5899999999999999999999999998 49999999999999999999
Q ss_pred hcCCCeEEEEEccCCCChHHHhcCCchHHHHHHhHhCCEEcccCHHHHHHHHHHHHhhhCceecccCceeeEEECCEEEE
Q 003025 221 RFTRLRMGFFLHSPFPSSEIYRTLPVREEILKALLNADLIGFHTFDYARHFLSCCSRMLGLEYQSKRGYIGLEYYGRTVG 300 (856)
Q Consensus 221 ~~~~~~i~~flH~PfP~~e~~~~lp~r~eil~~ll~~dligf~t~~~~~~Fl~~~~r~lg~~~~~~~~~~~~~~~gr~~~ 300 (856)
+.|+++||||||+|||++++|+++|++++|+++||++|+|||||++|++||++||.++++.+..... .+.+.|+.++
T Consensus 143 ~~~~~~i~~flH~pfP~~~~fr~lp~~~~il~~ll~~d~igf~~~~~~~~fl~~~~~ll~~~~~~~~---~i~~~gr~v~ 219 (456)
T d1uqta_ 143 RGVNNRIGFFLHIPFPTPEIFNALPTYDTLLEQLCDYDLLGFQTENDRLAFLDCLSNLTRVTTRSAK---SHTAWGKAFR 219 (456)
T ss_dssp TTCCSCEEEECCSCCCCHHHHTTSTTHHHHHHHHTTSSEEEESSHHHHHHHHHHHHHHSCEEEETTT---EEEETTEEEE
T ss_pred hCCCCcEEEEeCCCCCChHHhccCcchHHHHHHhhccccccccCHHHHHHHHHHHHHHhCcccccCC---eEEecCceee
Confidence 9999999999999999999999999999999999999999999999999999999999998876554 4788999999
Q ss_pred EEEeecccCchHHHHHhcCchHHHHHHHHHHHcCCCeEEEeccCccccCCHHHHHHHHHHHHHhCCCCcCceEEEEEecC
Q 003025 301 IKIMPVGIHMGQIESVLRLADKDWRVQELKQQFEGKTVLLGVDDMDIFKGVDLKLLAMEHLLKQHPKWQGRAVLVQIANP 380 (856)
Q Consensus 301 i~i~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~k~iil~VdRld~~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p 380 (856)
+.++|+|||+..|......+ ..+.+.+++++++|+++|++|||+|+.||+..+|+||++||++||+++++++|+|++.|
T Consensus 220 v~~~p~GID~~~~~~~~~~~-~~~~~~~l~~~~~~~~~il~V~Rld~~KGi~~~l~A~~~~l~~~p~~~~~v~lv~~~~~ 298 (456)
T d1uqta_ 220 TEVYPIGIEPKEIAKQAAGP-LPPKLAQLKAELKNVQNIFSVERLDYSKGLPERFLAYEALLEKYPQHHGKIRYTQIAPT 298 (456)
T ss_dssp EEECCCCCCHHHHHHHHHSC-CCHHHHHHHHHTTTCEEEEEECCBCGGGCHHHHHHHHHHHHHHCGGGTTTEEEEEECCB
T ss_pred eeeecCcccchhhhhhcccH-HHHHHHHHHHhcCCCeEEEEeCCCchhhchHHHHHHHHHHHHhCccccccEEEEEEcCC
Confidence 99999999999998766554 34567788999999999999999999999999999999999999999999999999999
Q ss_pred CCCCchhHHHHHHHHHHHHHHHhcccCCCCcccEEEEcCCCCHHHHHHHHHhcceeeeccccccCCCcccceeeeecCCC
Q 003025 381 ARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDKPVTLSERAAYYTIAECVVVTAVRDGMNLTPYEYIVCRQGVS 460 (856)
Q Consensus 381 ~r~~~~~~~~l~~~~~~lv~~IN~~~~~~~~~pvv~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~a~~~~~~ 460 (856)
++++.++|.+++.++.+++++||++|++.+|+|++++.+.++++++.++|+.||||++||++||||||++|||||+..
T Consensus 299 ~~~~~~~~~~~~~ev~~lv~~in~~~~~~~~~~~v~~~~~~~~~~l~a~~~~Adv~v~~s~~EG~~lv~~Ea~a~~~p-- 376 (456)
T d1uqta_ 299 SRGDVQAYQDIRHQLENEAGRINGKYGQLGWTPLYYLNQHFDRKLLMKIFRYSDVGLVTPLRDGMNLVAKEYVAAQDP-- 376 (456)
T ss_dssp CSTTSHHHHHHHHHHHHHHHHHHHHHCBTTBCSEEEECSCCCHHHHHHHHHHCSEEEECCSSBSCCHHHHHHHHHSCT--
T ss_pred cccchHHHHHHHHHHHHHHHHHHhhhccCCCCceeeccCCcCHHHHhHHHhhhceeecCCccCCCCcHHHHHHHhCCC--
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999999872
Q ss_pred CCCCCCCCCCCCCceEEecCCcccccccCCceeeCCCCHHHHHHHHHHHHcCCHHHHHHHHHHHhhhhhcCCHHHHHHHH
Q 003025 461 GSESSSESSAPKKSMLVVSEFIGCSPSLSGAIRVNPWNIEATAEAMHEAIQMNEAEKQLRHEKHYRYVSTHDVAYWARSF 540 (856)
Q Consensus 461 ~~~~~~~~~~~~~g~lV~Se~~G~~~~l~~al~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~~ 540 (856)
.++|+||+|+++|++++|.+|++|||||++++|+||.+||+||++||++|+++++++|.+||+.+|+++|
T Consensus 377 ----------~~~g~lIlS~~~G~~~~l~~g~lVnP~d~~~~A~ai~~aL~~~~~er~~~~~~~~~~v~~~~~~~W~~~f 446 (456)
T d1uqta_ 377 ----------ANPGVLVLSQFAGAANELTSALIVNPYDRDEVAAALDRALTMSLAERISRHAEMLDVIVKNDINHWQECF 446 (456)
T ss_dssp ----------TSCCEEEEETTBGGGGTCTTSEEECTTCHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHTCHHHHHHHH
T ss_pred ----------CCCCcEEEeCCCCCHHHhCCeEEECcCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHCCHHHHHHHH
Confidence 3468999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHH
Q 003025 541 FQDMERT 547 (856)
Q Consensus 541 l~~l~~~ 547 (856)
|.+|+++
T Consensus 447 l~~l~~~ 453 (456)
T d1uqta_ 447 ISDLKQI 453 (456)
T ss_dssp HHHHHHS
T ss_pred HHHHHhh
Confidence 9999874
|
| >d1u02a_ c.108.1.15 (A:) Trehalose-6-phosphate phosphatase related protein {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Trehalose-phosphatase domain: Trehalose-6-phosphate phosphatase related protein species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=99.97 E-value=1.3e-29 Score=259.42 Aligned_cols=221 Identities=22% Similarity=0.352 Sum_probs=180.6
Q ss_pred EEEEecCCCCCCCCC--CCCCCCHHHHHHHHHHHhhCCCeEEEecCCChhhHHHhhcCCCCccEEeeCCEEEEeCCCcce
Q 003025 593 AILFDYDGTVMPQTS--INKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSPCKKLGIAAEHGYFMRWSADEEW 670 (856)
Q Consensus 593 lI~~DlDGTLl~~~~--~~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~~~~lgliaenG~~I~~~~~~~w 670 (856)
||+||+||||+++.. ..+.++++++++|++| ++ ++.|+|+|||+...+...+. +..+++++||+.+..++...+
T Consensus 2 Li~~DlDGTL~~~~~~~~~~~i~~~~~~~l~~l-~~-~~~v~i~TGR~~~~l~~~~~--~~~~~~~~ng~~~~~~~~~~~ 77 (229)
T d1u02a_ 2 LIFLDYDGTLVPIIMNPEESYADAGLLSLISDL-KE-RFDTYIVTGRSPEEISRFLP--LDINMICYHGACSKINGQIVY 77 (229)
T ss_dssp EEEEECBTTTBCCCSCGGGCCCCHHHHHHHHHH-HH-HSEEEEECSSCHHHHHHHSC--SSCEEEEGGGTEEEETTEEEE
T ss_pred EEEEEecCCCCCCCCChhhCCCCHHHHHHHHHH-hh-CCCEEEEcCCCHHHhhhhcC--ccccEEecCeEEEecCCceee
Confidence 899999999997432 3567999999999998 44 67899999999999988774 345788999999888766544
Q ss_pred EecCCCCcccHHHHHHHHHHHHhhcCCcceEEecccceEEeeecCCCCCCchhHHHHHHHHHHHhcCCCeEEEEcCeEEE
Q 003025 671 QNCGQSVDFGWIQIAEPVMKLYTESTDGSYIEIKESALVWHHRDADPGFGSSQAKELLDHLESVLANEPAAVKSGQFIVE 750 (856)
Q Consensus 671 ~~~~~~~~~~w~~~v~~i~~~~~~~~~Gs~ie~k~~~l~~~~~~~dp~~~~~~a~el~~~L~~~l~~~~~~v~~g~~~vE 750 (856)
.. .......|.+.+.+.+..+....+|...+.+.....+++....+. ...+..+.++..+....+.+.++..++|
T Consensus 78 ~~-~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~l~~~~~~~~~~~~~~~~~id 152 (229)
T d1u02a_ 78 NN-GSDRFLGVFDRIYEDTRSWVSDFPGLRIYRKNLAVLYHLGLMGAD----MKPKLRSRIEEIARIFGVETYYGKMIIE 152 (229)
T ss_dssp CT-TGGGGHHHHHHHHHHHTTHHHHSTTCEEEEETTEEEEECTTSCST----THHHHHHHHHHHHHHHTCEEEECSSEEE
T ss_pred ec-chhhhHHHHHHHHHHhHHhhcccCCceecccccceeeeehhhhhh----hHHHHHHHHHHHhhcCCeEEEeeceEEE
Confidence 32 223344566667777777777889999999999999988766544 3455666666666666788999999999
Q ss_pred EEeCCCCHHHHHHHHHHHhhhcCCCcceEEEEeCCchhHHHHHHccccccCCCCCCCccEEEEEeCCCccccceEcCChh
Q 003025 751 VKPQGVSKGVVAEKIFTTMAESGRHADFVLCIGDDRSDEDMFEIIGNATSSGVLSSNASVFACTVGQKPSKAKYYLDDAA 830 (856)
Q Consensus 751 I~p~gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~~s~A~y~l~~~~ 830 (856)
|.|+|+|||.|+++|+++ ++++|||||.||++||++++.+ |+|+||++++.|+|++++++
T Consensus 153 i~p~g~~Kg~al~~l~~~--------~~~i~~GDs~ND~~Mf~~~~~~------------~av~~g~~~~~A~~~~~~~~ 212 (229)
T d1u02a_ 153 LRVPGVNKGSAIRSVRGE--------RPAIIAGDDATDEAAFEANDDA------------LTIKVGEGETHAKFHVADYI 212 (229)
T ss_dssp EECTTCCHHHHHHHHHTT--------SCEEEEESSHHHHHHHHTTTTS------------EEEEESSSCCCCSEEESSHH
T ss_pred EecCCCCHHHHHHHHhcc--------ccceeecCCCChHHHHhccCCe------------EEEEeCCCCccCeEEcCCHH
Confidence 999999999999999753 6799999999999999999875 89999999999999999999
Q ss_pred HHHHHHHHHHHh
Q 003025 831 EVVTMLEALAEA 842 (856)
Q Consensus 831 eV~~~L~~L~~~ 842 (856)
||.++|+.|...
T Consensus 213 ev~~~l~~l~~~ 224 (229)
T d1u02a_ 213 EMRKILKFIEML 224 (229)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 998888887543
|
| >d1rlma_ c.108.1.10 (A:) Sugar phosphatase SupH (YbiV) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sugar phosphatase SupH (YbiV) species: Escherichia coli [TaxId: 562]
Probab=99.94 E-value=2.9e-26 Score=241.73 Aligned_cols=226 Identities=19% Similarity=0.256 Sum_probs=164.8
Q ss_pred cEEEEEecCCCCCCCCCCCCCCC-HHHHHHHHHHHhhCCCeEEEecCCChhhHHHhhcCCC-CccEEeeCCEEEEeCCCc
Q 003025 591 SRAILFDYDGTVMPQTSINKAPS-QAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSPCK-KLGIAAEHGYFMRWSADE 668 (856)
Q Consensus 591 ~rlI~~DlDGTLl~~~~~~~~~s-~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~~~-~lgliaenG~~I~~~~~~ 668 (856)
+|+|+||+||||++ +.+.++ ++++++|++| ++.|+.|+++|||+...+.+++..+. ..+++++||+.|..++..
T Consensus 2 IKli~~DlDGTLl~---~~~~~~~~~~~~~l~~l-~~~gi~~~i~TGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~~~~ 77 (269)
T d1rlma_ 2 VKVIVTDMDGTFLN---DAKTYNQPRFMAQYQEL-KKRGIKFVVASGNQYYQLISFFPELKDEISFVAENGALVYEHGKQ 77 (269)
T ss_dssp CCEEEECCCCCCSC---TTSCCCHHHHHHHHHHH-HHHTCEEEEECSSCHHHHGGGCTTTTTTSEEEEGGGTEEEETTEE
T ss_pred EEEEEEeCCccCcC---CCCcCChHHHHHHHHHH-HHCCCEEEEEcCCCHHHHHHHHHHhCcccceEeeceeEEEECCcE
Confidence 79999999999998 666655 7899999997 67799999999999999999998764 468999999999987655
Q ss_pred ceEecCCCCcccHHHHHHHHHHHHhhcC---------CcceEEecccc------------e--EEeeecCCCC-------
Q 003025 669 EWQNCGQSVDFGWIQIAEPVMKLYTEST---------DGSYIEIKESA------------L--VWHHRDADPG------- 718 (856)
Q Consensus 669 ~w~~~~~~~~~~w~~~v~~i~~~~~~~~---------~Gs~ie~k~~~------------l--~~~~~~~dp~------- 718 (856)
.+..... .......+..+.... ++.++...... + ...+...+..
T Consensus 78 ~~~~~~~------~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (269)
T d1rlma_ 78 LFHGELT------RHESRIVIGELLKDKQLNFVACGLQSAYVSENAPEAFVALMAKHYHRLKPVKDYQEIDDVLFKFSLN 151 (269)
T ss_dssp EEECCCC------HHHHHHHHHHHHTCTTCEEEEEESSCEEEETTSCHHHHHHHHTTCSSEEEESCGGGCCSCEEEEEEE
T ss_pred EEEeccc------hHHHHHHHHHHHhhcCceEEEEecCceEEecCCcHHHHHHHHhhcccccccccHhhhcchheEEEec
Confidence 4433211 111222222222211 12222111000 0 0001111110
Q ss_pred CCchhHHHHHHHHHHHhcCCCeEEEEcCeEEEEEeCCCCHHHHHHHHHHHhhhcCCCcceEEEEeCCchhHHHHHHcccc
Q 003025 719 FGSSQAKELLDHLESVLANEPAAVKSGQFIVEVKPQGVSKGVVAEKIFTTMAESGRHADFVLCIGDDRSDEDMFEIIGNA 798 (856)
Q Consensus 719 ~~~~~a~el~~~L~~~l~~~~~~v~~g~~~vEI~p~gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~ 798 (856)
....+..++.+++...+......+.++..++||.|+++|||.|+++|++++ |++++++++||||.||++||+.+|.
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~p~~~sK~~al~~l~~~l---gi~~~~vi~~GD~~ND~~Ml~~ag~- 227 (269)
T d1rlma_ 152 LPDEQIPLVIDKLHVALDGIMKPVTSGFGFIDLIIPGLHKANGISRLLKRW---DLSPQNVVAIGDSGNDAEMLKMARY- 227 (269)
T ss_dssp CCGGGHHHHHHHHHHHTTTSSEEEECSTTEEEEECTTCSHHHHHHHHHHHH---TCCGGGEEEEECSGGGHHHHHHCSE-
T ss_pred CCHHHHHHHHHHHHHHhhcceEEEEEcCceEEEecCchHHHHHHHHHhhhh---ccccccEEEEcCCcchHHHHHhCCe-
Confidence 112456777888877776666788889999999999999999999999999 9999999999999999999999985
Q ss_pred ccCCCCCCCccEEEEEeCCC----ccccceEcCC--hhHHHHHHHHHHHhc
Q 003025 799 TSSGVLSSNASVFACTVGQK----PSKAKYYLDD--AAEVVTMLEALAEAS 843 (856)
Q Consensus 799 ~~~~~~~~~~~~~av~vG~~----~s~A~y~l~~--~~eV~~~L~~L~~~~ 843 (856)
+|+|||+ +..|+|++.+ .++|++.|++|.+..
T Consensus 228 -------------~vam~Na~~~lk~~A~~v~~~~~~~Gva~~i~~~l~~~ 265 (269)
T d1rlma_ 228 -------------SFAMGNAAENIKQIARYATDDNNHEGALNVIQAVLDNT 265 (269)
T ss_dssp -------------EEECTTCCHHHHHHCSEECCCGGGTHHHHHHHHHHHTC
T ss_pred -------------EEEeCCCCHHHHHhCCEEcCCCCccHHHHHHHHHHhcC
Confidence 6888875 5789999864 677999999998743
|
| >d1nf2a_ c.108.1.10 (A:) Hypothetical protein TM0651 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein TM0651 species: Thermotoga maritima [TaxId: 2336]
Probab=99.93 E-value=1.3e-25 Score=236.96 Aligned_cols=224 Identities=19% Similarity=0.198 Sum_probs=160.9
Q ss_pred CcEEEEEecCCCCCCCCCCCCCCCHHHHHHHHHHHhhCCCeEEEecCCChhhHHHhhcCC--CCccEEeeCCEEEEeCCC
Q 003025 590 KSRAILFDYDGTVMPQTSINKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSPC--KKLGIAAEHGYFMRWSAD 667 (856)
Q Consensus 590 ~~rlI~~DlDGTLl~~~~~~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~~--~~lgliaenG~~I~~~~~ 667 (856)
|+|+|+||+||||++ +++.++++++++|++| ++ +..++++|||++..+.+.+... ...+++++||+.|..+++
T Consensus 1 m~Kli~~DlDGTL~~---~~~~i~~~~~~al~~l-~~-~~~~~i~TGR~~~~~~~~~~~~~~~~~~~I~~nGa~i~~~~~ 75 (267)
T d1nf2a_ 1 MYRVFVFDLDGTLLN---DNLEISEKDRRNIEKL-SR-KCYVVFASGRMLVSTLNVEKKYFKRTFPTIAYNGAIVYLPEE 75 (267)
T ss_dssp CBCEEEEECCCCCSC---TTSCCCHHHHHHHHHH-TT-TSEEEEECSSCHHHHHHHHHHHSSSCCCEEEGGGTEEEETTT
T ss_pred CeEEEEEeCCccccC---CcCccCHHHHHHHHHH-Hc-CCEEEEECCCChHHHHHHHHHhcccCCceeccCCeEEEeccc
Confidence 689999999999999 7889999999999998 54 5689999999999888877653 345689999999988765
Q ss_pred cceEecCCCCcccHHHHHHHHHHHHhhcCC--------cceEEecccceE-------EeeecCCCC---------C----
Q 003025 668 EEWQNCGQSVDFGWIQIAEPVMKLYTESTD--------GSYIEIKESALV-------WHHRDADPG---------F---- 719 (856)
Q Consensus 668 ~~w~~~~~~~~~~w~~~v~~i~~~~~~~~~--------Gs~ie~k~~~l~-------~~~~~~dp~---------~---- 719 (856)
...... ..+. +.+.++++...+... +.+.+.....+. ..+.. .+. .
T Consensus 76 ~~i~~~--~i~~---~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~i~ 149 (267)
T d1nf2a_ 76 GVILNE--KIPP---EVAKDIIEYIKPLNVHWQAYIDDVLYSEKDNEEIKSYARHSNVDYRV-EPNLSELVSKMGTTKLL 149 (267)
T ss_dssp EEEEEC--CBCH---HHHHHHHHHHGGGCCCEEEECSSCEEESSCCHHHHHHHHHTTCCEEE-CTTHHHHHHHHCBSEEE
T ss_pred cccccc--CCCH---HHHHHHHHHHHhcCceEEEeeCceEEecCCcHHHHHHHHhcCCCcee-cCcHHHHhhhccceEEE
Confidence 443221 1222 223333333332211 111111000000 00000 000 0
Q ss_pred ---CchhHHHHHHHHHHHhcCCCeEEEEcCeEEEEEeCCCCHHHHHHHHHHHhhhcCCCcceEEEEeCCchhHHHHHHcc
Q 003025 720 ---GSSQAKELLDHLESVLANEPAAVKSGQFIVEVKPQGVSKGVVAEKIFTTMAESGRHADFVLCIGDDRSDEDMFEIIG 796 (856)
Q Consensus 720 ---~~~~a~el~~~L~~~l~~~~~~v~~g~~~vEI~p~gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag 796 (856)
...+.+++.+.+.+.+.+....+.++..++||.|+++|||.|+++|++++ |++++++++|||+.||++||+.++
T Consensus 150 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~di~~~~~~K~~ai~~l~~~~---~i~~~~vva~GD~~ND~~ml~~~~ 226 (267)
T d1nf2a_ 150 LIDTPERLDELKEILSERFKDVVKVFKSFPTYLEIVPKNVDKGKALRFLRERM---NWKKEEIVVFGDNENDLFMFEEAG 226 (267)
T ss_dssp EECCHHHHHHHHHHHHHHHTTTSEEEEEETTEEEEECTTCCHHHHHHHHHHHH---TCCGGGEEEEECSHHHHHHHTTCS
T ss_pred EeccHHHHHHHHHHHHHhhCCcEEEEEeecceeeecCCCCchhHHHHHHHHhh---ccCcccEEEEcCCcchHHHHHhCC
Confidence 12345667777777777666777889999999999999999999999999 999999999999999999999998
Q ss_pred ccccCCCCCCCccEEEEEeCCC----ccccceEcC--ChhHHHHHHHHHHH
Q 003025 797 NATSSGVLSSNASVFACTVGQK----PSKAKYYLD--DAAEVVTMLEALAE 841 (856)
Q Consensus 797 ~~~~~~~~~~~~~~~av~vG~~----~s~A~y~l~--~~~eV~~~L~~L~~ 841 (856)
++|+||++ +..|+|++. +.++|+++|++|..
T Consensus 227 --------------~sva~~na~~~~k~~A~~i~~~~~~~Gva~~i~~ll~ 263 (267)
T d1nf2a_ 227 --------------LRVAMENAIEKVKEASDIVTLTNNDSGVSYVLERIST 263 (267)
T ss_dssp --------------EEEECTTSCHHHHHHCSEECCCTTTTHHHHHHTTBCB
T ss_pred --------------cEEEeCCCCHHHHHhCCEEcCCCCccHHHHHHHHHHh
Confidence 47888886 578889986 56789999998753
|
| >d1nrwa_ c.108.1.10 (A:) Hypothetical protein YwpJ {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YwpJ species: Bacillus subtilis [TaxId: 1423]
Probab=99.93 E-value=4.5e-25 Score=234.22 Aligned_cols=223 Identities=18% Similarity=0.198 Sum_probs=151.5
Q ss_pred cEEEEEecCCCCCCCCCCCCCCCHHHHHHHHHHHhhCCCeEEEecCCChhhHHHhhcCCC-CccEEeeCCEEEEeCCCcc
Q 003025 591 SRAILFDYDGTVMPQTSINKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSPCK-KLGIAAEHGYFMRWSADEE 669 (856)
Q Consensus 591 ~rlI~~DlDGTLl~~~~~~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~~~-~lgliaenG~~I~~~~~~~ 669 (856)
+|+|+||+||||++ .++.++++++++|++| +++|+.|+++|||++..+.+.+..+. ..+++++||+.+...++..
T Consensus 1 iKli~~DlDGTLl~---~~~~i~~~~~~~l~~l-~~~Gi~~~i~TGR~~~~~~~~~~~l~~~~~~i~~nG~~i~~~~~~~ 76 (285)
T d1nrwa_ 1 MKLIAIDLDGTLLN---SKHQVSLENENALRQA-QRDGIEVVVSTGRAHFDVMSIFEPLGIKTWVISANGAVIHDPEGRL 76 (285)
T ss_dssp CCEEEEECCCCCSC---TTSCCCHHHHHHHHHH-HHTTCEEEEECSSCHHHHHHHHGGGTCCCEEEEGGGTEEECTTCCE
T ss_pred CeEEEEECCccccC---CCCccCHHHHHHHHHH-HHCCCEEEEECCCCHHHHHHHHHHhCCCcEEEecCceeEEecCCce
Confidence 58999999999999 7888999999999997 77899999999999999999997764 4578999999999865544
Q ss_pred eEecCCCCcccHHHHHHHHHHHHhhcCCcceEEecc-----------------------------------------cce
Q 003025 670 WQNCGQSVDFGWIQIAEPVMKLYTESTDGSYIEIKE-----------------------------------------SAL 708 (856)
Q Consensus 670 w~~~~~~~~~~w~~~v~~i~~~~~~~~~Gs~ie~k~-----------------------------------------~~l 708 (856)
+... ..+. +.+.++++.+........+.... ...
T Consensus 77 i~~~--~i~~---~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (285)
T d1nrwa_ 77 YHHE--TIDK---KRAYDILSWLESENYYYEVFTGSAIYTPQNGRELLDVELDRFRSANPEADLSVLKQAAEVQYSQSGF 151 (285)
T ss_dssp EEEC--CCCH---HHHHHHHHHHHHTTCEEEEEESSCEEECCCHHHHHHHHHHHHHHHCTTSCHHHHHHHHHHHHHTCCE
T ss_pred eeec--cCCH---HHHHHHHHHHHHcCCceEEecCceEEeccccHHHHHHHHHhhhhcCcccchhhhhhhhhhhhccccc
Confidence 3321 1111 12222222222111000000000 000
Q ss_pred EE--eeec---C-CCC-CC-----chhHHHHHHHHHHHhcCCC-eEEEEcCeEEEEEeCCCCHHHHHHHHHHHhhhcCCC
Q 003025 709 VW--HHRD---A-DPG-FG-----SSQAKELLDHLESVLANEP-AAVKSGQFIVEVKPQGVSKGVVAEKIFTTMAESGRH 775 (856)
Q Consensus 709 ~~--~~~~---~-dp~-~~-----~~~a~el~~~L~~~l~~~~-~~v~~g~~~vEI~p~gvsKG~al~~Ll~~l~~~gi~ 775 (856)
.. .+.. . ++. +. ......+...+........ ..+.++..++||.|+++|||.|++++++++ |++
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~ldi~~~~~~K~~ai~~l~~~~---gi~ 228 (285)
T d1nrwa_ 152 AYINSFQELFEADEPIDFYNILGFSFFKEKLEAGWKRYEHAEDLTLVSSAEHNFELSSRKASKGQALKRLAKQL---NIP 228 (285)
T ss_dssp EECSCGGGGTSSSSCCCEEEEEEECSCHHHHHHHHHHHTTCTTEEEECSSTTEEEEEETTCSHHHHHHHHHHHT---TCC
T ss_pred eeechHHHHhhcccchhheeeecccchHHHHHHHHHHhhcCCCeEEEEeCCcEEEEecccchhhhHHHHHHhhc---ccC
Confidence 00 0000 0 000 00 0011222222222222222 455678899999999999999999999999 999
Q ss_pred cceEEEEeCCchhHHHHHHccccccCCCCCCCccEEEEEeCCC----ccccceEcCC--hhHHHHHHHHH
Q 003025 776 ADFVLCIGDDRSDEDMFEIIGNATSSGVLSSNASVFACTVGQK----PSKAKYYLDD--AAEVVTMLEAL 839 (856)
Q Consensus 776 ~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~----~s~A~y~l~~--~~eV~~~L~~L 839 (856)
++++++|||+.||++||+.++ ++|+|+++ +..|+|++.+ .++|+++|++|
T Consensus 229 ~~~vi~~GD~~ND~~Ml~~a~--------------~svam~na~~~~k~~A~~v~~~~~~~Gv~~~l~~l 284 (285)
T d1nrwa_ 229 LEETAAVGDSLNDKSMLEAAG--------------KGVAMGNAREDIKSIADAVTLTNDEHGVAHMMKHL 284 (285)
T ss_dssp GGGEEEEESSGGGHHHHHHSS--------------EEEECTTCCHHHHHHCSEECCCGGGTHHHHHHHHT
T ss_pred cccEEEEeCCHHHHHHHHhCC--------------eEEEeCCCCHHHHHhCCEEcCCCCccHHHHHHHHh
Confidence 999999999999999999998 46888876 5788999864 67899999886
|
| >d1rkqa_ c.108.1.10 (A:) Hypothetical protein YidA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YidA species: Escherichia coli [TaxId: 562]
Probab=99.93 E-value=1.7e-25 Score=235.84 Aligned_cols=229 Identities=17% Similarity=0.237 Sum_probs=155.6
Q ss_pred CcEEEEEecCCCCCCCCCCCCCCCHHHHHHHHHHHhhCCCeEEEecCCChhhHHHhhcCC----CCccEEeeCCEEEEeC
Q 003025 590 KSRAILFDYDGTVMPQTSINKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSPC----KKLGIAAEHGYFMRWS 665 (856)
Q Consensus 590 ~~rlI~~DlDGTLl~~~~~~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~~----~~lgliaenG~~I~~~ 665 (856)
.+|||+||+||||++ .++.+++++.++|++| +++|+.|+|||||++..+.+++..+ +..+++++||+.+...
T Consensus 3 ~iKli~~DlDGTL~~---~~~~i~~~~~~al~~L-~~~gi~v~i~TGR~~~~~~~~~~~l~l~~~~~~~i~~nGa~i~~~ 78 (271)
T d1rkqa_ 3 AIKLIAIDMDGTLLL---PDHTISPAVKNAIAAA-RARGVNVVLTTGRPYAGVHNYLKELHMEQPGDYCITYNGALVQKA 78 (271)
T ss_dssp CCCEEEECCCCCCSC---TTSCCCHHHHHHHHHH-HHTTCEEEEECSSCGGGTHHHHHHTTCCSTTCEEEEGGGTEEEET
T ss_pred CeeEEEEeCCccccC---CCCccCHHHHHHHHHH-HHCCCEEEEECCCCHHHHHHHHHHhcCcCCCcEEEEcCceeEecc
Confidence 489999999999999 7889999999999998 7779999999999999999888664 3345889999998765
Q ss_pred CCcceEecCCCCcccHHHHHHHHHHHHhhc-----CCcceEEecccc-----------eEEeeec---CCCC--C-----
Q 003025 666 ADEEWQNCGQSVDFGWIQIAEPVMKLYTES-----TDGSYIEIKESA-----------LVWHHRD---ADPG--F----- 719 (856)
Q Consensus 666 ~~~~w~~~~~~~~~~w~~~v~~i~~~~~~~-----~~Gs~ie~k~~~-----------l~~~~~~---~dp~--~----- 719 (856)
......... .........+....+..... ..+.+...+... ....+.. .++. +
T Consensus 79 ~~~~~i~~~-~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (271)
T d1rkqa_ 79 ADGSTVAQT-ALSYDDYRFLEKLSREVGSHFHALDRTTLYTANRDISYYTVHESFVATIPLVFCEAEKMDPNTQFLKVMM 157 (271)
T ss_dssp TTCCEEEEC-CBCHHHHHHHHHHHHHHTCEEEEECSSCEEECCSSCCHHHHHHHHHTTCCEEECCGGGSCTTCCBCEEEE
T ss_pred CCCeEEEee-cccHHHHHHHHHHHHhhcceEEEEecceEEeccccchhHHHHHHhhccCccccchhhhcCcccceEEEEE
Confidence 432221111 11222222222222222110 011111111000 0000000 0000 0
Q ss_pred --CchhHHHHHHHHHHHhcCCCeEEEEcCeEEEEEeCCCCHHHHHHHHHHHhhhcCCCcceEEEEeCCchhHHHHHHccc
Q 003025 720 --GSSQAKELLDHLESVLANEPAAVKSGQFIVEVKPQGVSKGVVAEKIFTTMAESGRHADFVLCIGDDRSDEDMFEIIGN 797 (856)
Q Consensus 720 --~~~~a~el~~~L~~~l~~~~~~v~~g~~~vEI~p~gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~ 797 (856)
.....++..+.+.+.+.+....+..++.++||.|+++|||.|+++|++++ +++.+++++|||+.||++||+.++.
T Consensus 158 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~p~~~~K~~al~~l~~~~---~i~~~~ii~~GD~~ND~~ml~~~~~ 234 (271)
T d1rkqa_ 158 IDEPAILDQAIARIPQEVKEKYTVLKSAPYFLEILDKRVNKGTGVKSLADVL---GIKPEEIMAIGDQENDIAMIEYAGV 234 (271)
T ss_dssp ECCHHHHHHHHHHSCHHHHHHEEEEEEETTEEEEEETTCSHHHHHHHHHHHH---TCCGGGEEEEECSGGGHHHHHHSSE
T ss_pred ecCHHHHHHHHHHHHHHhhcceEEEEecCceEEecCCCCCcccccceehhhc---ccchhcEEEEeCcHhHHHHHHhCCc
Confidence 01233444555544444444667889999999999999999999999999 9999999999999999999999985
Q ss_pred cccCCCCCCCccEEEEEeCCC----ccccceEcCC--hhHHHHHHHHHH
Q 003025 798 ATSSGVLSSNASVFACTVGQK----PSKAKYYLDD--AAEVVTMLEALA 840 (856)
Q Consensus 798 ~~~~~~~~~~~~~~av~vG~~----~s~A~y~l~~--~~eV~~~L~~L~ 840 (856)
+++|||+ +..|+|++.+ .++|++.|+++.
T Consensus 235 --------------~~am~na~~~lk~~a~~i~~~~~~~Gv~~~l~~~~ 269 (271)
T d1rkqa_ 235 --------------GVAVDNAIPSVKEVANFVTKSNLEDGVAFAIEKYV 269 (271)
T ss_dssp --------------EEECTTSCHHHHHHCSEECCCTTTTHHHHHHHHHT
T ss_pred --------------EEEeCCCCHHHHHhCCEEcCCCCcChHHHHHHHHh
Confidence 6888886 4788998853 578999998874
|
| >d2rbka1 c.108.1.10 (A:2-261) Sugar-phosphate phosphatase BT4131 {Bacteroides thetaiotaomicron [TaxId: 818]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sugar-phosphate phosphatase BT4131 species: Bacteroides thetaiotaomicron [TaxId: 818]
Probab=99.92 E-value=1.3e-24 Score=228.33 Aligned_cols=223 Identities=13% Similarity=0.158 Sum_probs=148.4
Q ss_pred cEEEEEecCCCCCCCCCCCCCCCHHHHHHHHHHHhhCCCeEEEecCCChhhHHHhhc---CCCCccEEeeCCEEEEeCCC
Q 003025 591 SRAILFDYDGTVMPQTSINKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFS---PCKKLGIAAEHGYFMRWSAD 667 (856)
Q Consensus 591 ~rlI~~DlDGTLl~~~~~~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~---~~~~lgliaenG~~I~~~~~ 667 (856)
.|+||||+||||++. ..+.++++++++|++| ++.|+.|++||||+...+..++. .....+++++||+.++.++.
T Consensus 1 ~k~if~DlDGTL~~~--~~~~i~~~~~~al~~l-~~~gi~v~~~TGR~~~~~~~l~~~~~~~~~~~~I~~nGa~i~~~~~ 77 (260)
T d2rbka1 1 TKALFFDIDGTLVSF--ETHRIPSSTIEALEAA-HAKGLKIFIATGRPKAIINNLSELQDRNLIDGYITMNGAYCFVGEE 77 (260)
T ss_dssp CCEEEECSBTTTBCT--TTSSCCHHHHHHHHHH-HHTTCEEEEECSSCGGGCCSCHHHHHTTCCCEEEEGGGTEEEETTE
T ss_pred CeEEEEECCCCCcCC--CCCCCCHHHHHHHHHH-HHCCCEEEEECCCCHHHHHHHHHHHhcCCCCceEecCCcccccCcc
Confidence 489999999999972 2467899999999997 88899999999999987765432 22345789999999998876
Q ss_pred cceEecCCCCcccHHHHHHHHHHHHhhcCCcceE-EecccceEE----------eeec--CCCC----------CC---c
Q 003025 668 EEWQNCGQSVDFGWIQIAEPVMKLYTESTDGSYI-EIKESALVW----------HHRD--ADPG----------FG---S 721 (856)
Q Consensus 668 ~~w~~~~~~~~~~w~~~v~~i~~~~~~~~~Gs~i-e~k~~~l~~----------~~~~--~dp~----------~~---~ 721 (856)
..+...++ .+ .+.++++...+......+ ......... .+.. ..+. +. .
T Consensus 78 ~i~~~~l~---~~---~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (260)
T d2rbka1 78 VIYKSAIP---QE---EVKAMAAFCEKKGVPCIFVEEHNISVCQPNEMVKKIFYDFLHVNVIPTVSFEEASNKEVIQMTP 151 (260)
T ss_dssp EEEECCCC---HH---HHHHHHHHHHHHTCCEEEECSSCEEEESCCHHHHHHTTTTTCCCCCCBCCHHHHHTSCCSEEEE
T ss_pred cccccCCC---HH---HHHHHHHHHHHcCCcEEEEecCceeeccchHHHHHHHHHhhccCcCcccCHhHhcCcceEEEee
Confidence 55554332 22 222333322221111111 111000000 0000 0000 00 0
Q ss_pred hhHHHHHHHHHHHhcCCCeEEEEcCeEEEEEeCCCCHHHHHHHHHHHhhhcCCCcceEEEEeCCchhHHHHHHccccccC
Q 003025 722 SQAKELLDHLESVLANEPAAVKSGQFIVEVKPQGVSKGVVAEKIFTTMAESGRHADFVLCIGDDRSDEDMFEIIGNATSS 801 (856)
Q Consensus 722 ~~a~el~~~L~~~l~~~~~~v~~g~~~vEI~p~gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~ 801 (856)
...++....+.+.+.. .....++..++||.|+++|||.|+++|++++ |++++++++||||.||++||+.++.
T Consensus 152 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~ei~p~~~sK~~al~~l~~~~---~i~~~~~~a~GD~~ND~~Ml~~a~~---- 223 (260)
T d2rbka1 152 FITEEEEKEVLPSIPT-CEIGRWYPAFADVTAKGDTKQKGIDEIIRHF---GIKLEETMSFGDGGNDISMLRHAAI---- 223 (260)
T ss_dssp CCCHHHHHHHGGGSTT-CEEECSSTTCCEEESTTCSHHHHHHHHHHHH---TCCGGGEEEEECSGGGHHHHHHSSE----
T ss_pred cCCHHHHHHHHHHhcc-ccceeecCcEEEEEeCCCCHHHHHHHHHHhc---cccHhheeEecCCcccHHHHHhCCe----
Confidence 0011222222222222 2445567889999999999999999999999 9999999999999999999999984
Q ss_pred CCCCCCccEEEEEeCCC----ccccceEcCC--hhHHHHHHHHHH
Q 003025 802 GVLSSNASVFACTVGQK----PSKAKYYLDD--AAEVVTMLEALA 840 (856)
Q Consensus 802 ~~~~~~~~~~av~vG~~----~s~A~y~l~~--~~eV~~~L~~L~ 840 (856)
+|+|||+ +..|+|++.+ .++|+++|+++.
T Consensus 224 ----------svav~na~~~lk~~A~~vt~~~~~~Gv~~~l~~~~ 258 (260)
T d2rbka1 224 ----------GVAMGQAKEDVKAAADYVTAPIDEDGISKAMKHFG 258 (260)
T ss_dssp ----------EEECTTSCHHHHHHSSEECCCGGGTHHHHHHHHHT
T ss_pred ----------EEEeCCCCHHHHHhCCEEeCCCCccHHHHHHHHhC
Confidence 6888886 5788998854 688999998863
|
| >d2b30a1 c.108.1.10 (A:18-300) PFL1270w orthologue {Plasmodium vivax [TaxId: 5855]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: PFL1270w orthologue species: Plasmodium vivax [TaxId: 5855]
Probab=99.91 E-value=1.3e-23 Score=221.95 Aligned_cols=235 Identities=17% Similarity=0.176 Sum_probs=164.1
Q ss_pred HHHHHcCCcEEEEEecCCCCCCCCCCCCCCCHHHHHHHHHHHhhCCCeEEEecCCChhhHHHhhcCC-------CCccEE
Q 003025 583 VSAYLRSKSRAILFDYDGTVMPQTSINKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSPC-------KKLGIA 655 (856)
Q Consensus 583 ~~~y~~s~~rlI~~DlDGTLl~~~~~~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~~-------~~lgli 655 (856)
-++++.+++|+|+||+||||+.. .++.++++++++|++| +++|+.|+|+|||++..+...+..+ .....+
T Consensus 2 ~~~~~~~~ikli~~DlDGTLl~~--~~~~i~~~~~~al~~l-~~~Gi~v~i~TGR~~~~~~~~~~~l~~~~~~~~~~~~i 78 (283)
T d2b30a1 2 EEALKGADIKLLLIDFDGTLFVD--KDIKVPSENIDAIKEA-IEKGYMVSICTGRSKVGILSAFGEENLKKMNFYGMPGV 78 (283)
T ss_dssp HHHTTTCCCCEEEEETBTTTBCC--TTTCSCHHHHHHHHHH-HHHTCEEEEECSSCHHHHHHHHCHHHHHHHTCCSCSEE
T ss_pred cccCcccCccEEEEECCCCCcCC--CCCcCCHHHHHHHHHH-HHCCCEEEEEcCCCHHHHHHHHHHhCcccccccCCceE
Confidence 35778899999999999999841 4678999999999998 7789999999999999998887542 123467
Q ss_pred eeCCEEEEeCCCcceEecCCCCcccHHHHHHHHHHHHhhcCC--cceEEecccce---------------------EEee
Q 003025 656 AEHGYFMRWSADEEWQNCGQSVDFGWIQIAEPVMKLYTESTD--GSYIEIKESAL---------------------VWHH 712 (856)
Q Consensus 656 aenG~~I~~~~~~~w~~~~~~~~~~w~~~v~~i~~~~~~~~~--Gs~ie~k~~~l---------------------~~~~ 712 (856)
+.||+.+....+...... ..+. ....++++.+..... ..++....... ....
T Consensus 79 ~~~g~~~~~~~~~~~~~~--~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (283)
T d2b30a1 79 YINGTIVYDQIGYTLLDE--TIET---DVYAELISYLVEKNLVNQTIFHRGESNYVTEDNKYADFLQKMYSENRSIIIRH 153 (283)
T ss_dssp EGGGTEEECTTCCEEEEC--CCCH---HHHHHHHHHHHHTTCGGGEEEEETTEEEEETTCTTTTHHHHHHSCCCCEEECH
T ss_pred EEeeeEEEcCCCcEeeec--ccCH---HHHHHHHHHHHhhcccceEEEEecceeEEeccchHHHHHHHHhhccccccccH
Confidence 788888876654433221 1121 122222222221110 11111111000 0000
Q ss_pred ec-CC-CC-------CCchhHHHHHHHHHHHhcCCCeEEEEcCeEEEEEeCCCCHHHHHHHHHHHhhhcCCCcceEEEEe
Q 003025 713 RD-AD-PG-------FGSSQAKELLDHLESVLANEPAAVKSGQFIVEVKPQGVSKGVVAEKIFTTMAESGRHADFVLCIG 783 (856)
Q Consensus 713 ~~-~d-p~-------~~~~~a~el~~~L~~~l~~~~~~v~~g~~~vEI~p~gvsKG~al~~Ll~~l~~~gi~~d~vlaiG 783 (856)
.+ .+ .. ......+++.+.+.+.+......+.++..++||.|.++|||.+++.+++++ +++.+++++||
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~K~~~l~~l~~~~---~i~~~~vi~~G 230 (283)
T d2b30a1 154 NEMLKYRTMNKLMIVLDPSESKTVIGNLKQKFKNKLTIFTTYNGHAEVTKLGHDKYTGINYLLKHY---NISNDQVLVVG 230 (283)
T ss_dssp HHHTTCCCCSEEEECCCTTTHHHHHHHHHHHSTTTEEEEECTTSCEEEEETTCCHHHHHHHHHHHT---TCCGGGEEEEE
T ss_pred HHHhhcccceEEEEecCHHHHHHHHHHHHHHhcccceEEEecceeEeecCCcchhHHHHHHHhhhc---ccccceEEEec
Confidence 00 00 00 001345777888887777666777888999999999999999999999999 99999999999
Q ss_pred CCchhHHHHHHccccccCCCCCCCccEEEEEeCCC----ccccceEcCC---hhHHHHHHHHHHHh
Q 003025 784 DDRSDEDMFEIIGNATSSGVLSSNASVFACTVGQK----PSKAKYYLDD---AAEVVTMLEALAEA 842 (856)
Q Consensus 784 D~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~----~s~A~y~l~~---~~eV~~~L~~L~~~ 842 (856)
||.||++||+.++. +|+||++ +..|+|++.. .++|.++|+++.+.
T Consensus 231 D~~ND~~Ml~~a~~--------------~va~~na~~~~k~~a~~v~~~~~~~g~v~~~l~~~~~~ 282 (283)
T d2b30a1 231 DAENDIAMLSNFKY--------------SFAVANATDSAKSHAKCVLPVSHREGAVAYLLKKVFDL 282 (283)
T ss_dssp CSGGGHHHHHSCSE--------------EEECTTCCHHHHHHSSEECSSCTTTTHHHHHHHHHHTT
T ss_pred CChhhHHHHHhCCc--------------EEEeCCCCHHHHHhCCEEECCcCCCcHHHHHHHHHHcC
Confidence 99999999999985 6888876 5778898853 34599999998764
|
| >d1wr8a_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Pyrococcus horikoshii [TaxId: 53953]
Probab=99.91 E-value=5.5e-24 Score=217.54 Aligned_cols=219 Identities=20% Similarity=0.264 Sum_probs=154.9
Q ss_pred CcEEEEEecCCCCCCCCCCCCCCCHHHHHHHHHHHhhCCCeEEEecCCChhhHHHhhcCCC-CccEEeeCCEEEEeCCCc
Q 003025 590 KSRAILFDYDGTVMPQTSINKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSPCK-KLGIAAEHGYFMRWSADE 668 (856)
Q Consensus 590 ~~rlI~~DlDGTLl~~~~~~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~~~-~lgliaenG~~I~~~~~~ 668 (856)
|+|+|+||+||||++ .++.++++++++|++| ++.|+.|+++|||+...+...+..+. ...++++||+.+...+..
T Consensus 1 kiK~i~~D~DGTL~~---~~~~i~~~~~~~l~~l-~~~gi~v~~~TGR~~~~~~~~~~~~~~~~~~i~~~g~~~~~~~~~ 76 (230)
T d1wr8a_ 1 KIKAISIDIDGTITY---PNRMIHEKALEAIRRA-ESLGIPIMLVTGNTVQFAEAASILIGTSGPVVAEDGGAISYKKKR 76 (230)
T ss_dssp CCCEEEEESTTTTBC---TTSCBCHHHHHHHHHH-HHTTCCEEEECSSCHHHHHHHHHHHTCCSCEEEGGGTEEEETTEE
T ss_pred CceEEEEecCCCCcC---CCCccCHHHHHHHHHH-HhCCCeEEEEeCCcHHHHHHHHHhcCCCcccccccceeeeccccc
Confidence 579999999999999 7888999999999997 77899999999999999888875543 456889999988877654
Q ss_pred ceEecCCCCcccHHHHHHHHHHHHhhcCCcceEEecccceEEeeecCCCCCCchhHHHHHHHHHHHhcCCCeEEEEcCeE
Q 003025 669 EWQNCGQSVDFGWIQIAEPVMKLYTESTDGSYIEIKESALVWHHRDADPGFGSSQAKELLDHLESVLANEPAAVKSGQFI 748 (856)
Q Consensus 669 ~w~~~~~~~~~~w~~~v~~i~~~~~~~~~Gs~ie~k~~~l~~~~~~~dp~~~~~~a~el~~~L~~~l~~~~~~v~~g~~~ 748 (856)
.+... ....+. ....+...+...........+...+.+. . ........+++.++ +. .......+..+
T Consensus 77 ~~~~~---~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~---~~~~~~~~~~~~~~----~~-~~~~~~~~~~~ 143 (230)
T d1wr8a_ 77 IFLAS---MDEEWI-LWNEIRKRFPNARTSYTMPDRRAGLVIM-R---ETINVETVREIINE----LN-LNLVAVDSGFA 143 (230)
T ss_dssp EESCC---CSHHHH-HHHHHHHHCTTCCBCTTGGGCSSCEEEC-T---TTSCHHHHHHHHHH----TT-CSCEEEECSSC
T ss_pred ccccc---ccHHHH-HHHHHHHhcccccceeecccceeeEEEe-c---ccccHHHHHHHHHH----hc-cceEEeeCCcE
Confidence 43321 111221 1222222332221111122222222221 1 11111122333322 22 23566778899
Q ss_pred EEEEeCCCCHHHHHHHHHHHhhhcCCCcceEEEEeCCchhHHHHHHccccccCCCCCCCccEEEEEeCCC----ccccce
Q 003025 749 VEVKPQGVSKGVVAEKIFTTMAESGRHADFVLCIGDDRSDEDMFEIIGNATSSGVLSSNASVFACTVGQK----PSKAKY 824 (856)
Q Consensus 749 vEI~p~gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~----~s~A~y 824 (856)
+||+|.+++|+.+++++++++ |++++++++|||+.||++||+.++. +|+||++ +..|+|
T Consensus 144 iei~~~~~~K~~al~~l~~~~---~i~~~~~~~iGD~~NDi~ml~~ag~--------------~vav~na~~~~k~~A~~ 206 (230)
T d1wr8a_ 144 IHVKKPWINKGSGIEKASEFL---GIKPKEVAHVGDGENDLDAFKVVGY--------------KVAVAQAPKILKENADY 206 (230)
T ss_dssp EEEECTTCCHHHHHHHHHHHH---TSCGGGEEEEECSGGGHHHHHHSSE--------------EEECTTSCHHHHTTCSE
T ss_pred EEEeeCCcCcchhhccccccc---ccchhheeeeecCccHHHHHHHCCe--------------EEEECCCCHHHHHhCCE
Confidence 999999999999999999999 9999999999999999999999984 6888876 578999
Q ss_pred EcCC--hhHHHHHHHHHHHh
Q 003025 825 YLDD--AAEVVTMLEALAEA 842 (856)
Q Consensus 825 ~l~~--~~eV~~~L~~L~~~ 842 (856)
++.+ .++|++.|+.+...
T Consensus 207 v~~~~~~~gv~~~i~~~l~~ 226 (230)
T d1wr8a_ 207 VTKKEYGEGGAEAIYHILEK 226 (230)
T ss_dssp ECSSCHHHHHHHHHHHHHHH
T ss_pred EECCCCcCHHHHHHHHHHHH
Confidence 9864 57799999887754
|
| >d1l6ra_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=99.90 E-value=1.6e-23 Score=214.99 Aligned_cols=213 Identities=15% Similarity=0.103 Sum_probs=152.2
Q ss_pred CcEEEEEecCCCCCCCCCCCCCCCHHHHHHHHHHHhhCCCeEEEecCCChhhHHHhhcCCC-CccEEeeCCEEEEeCCCc
Q 003025 590 KSRAILFDYDGTVMPQTSINKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSPCK-KLGIAAEHGYFMRWSADE 668 (856)
Q Consensus 590 ~~rlI~~DlDGTLl~~~~~~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~~~-~lgliaenG~~I~~~~~~ 668 (856)
|+|+|+||+||||++ ....+++++.++|++| .+.|+.|+++|||+...+..+...++ ...++++||+.+..+...
T Consensus 2 miKli~~D~DGTL~~---~~~~i~~~~~~al~~l-~~~g~~v~~~TGr~~~~~~~~~~~~~~~~~~i~~~G~~~~~~~~~ 77 (225)
T d1l6ra_ 2 MIRLAAIDVDGNLTD---RDRLISTKAIESIRSA-EKKGLTVSLLSGNVIPVVYALKIFLGINGPVFGENGGIMFDNDGS 77 (225)
T ss_dssp CCCEEEEEHHHHSBC---TTSCBCHHHHHHHHHH-HHTTCEEEEECSSCHHHHHHHHHHHTCCSCEEEGGGTEEECTTSC
T ss_pred CeEEEEEecCCCCcC---CCCcCCHHHHHHHHHH-HHCCCEEEEEcCCchhhhHHHHHHcCCCceEEeecceEEEeCCcc
Confidence 789999999999998 8899999999999997 77899999999999987777664432 456888999988877665
Q ss_pred ceEecCCCCcccHHHHHHHHHHHHhhcCCcceEEe-cccceEEeeecCCCCCCchhHHHHHHHHHHHhcCCCeEEEEcCe
Q 003025 669 EWQNCGQSVDFGWIQIAEPVMKLYTESTDGSYIEI-KESALVWHHRDADPGFGSSQAKELLDHLESVLANEPAAVKSGQF 747 (856)
Q Consensus 669 ~w~~~~~~~~~~w~~~v~~i~~~~~~~~~Gs~ie~-k~~~l~~~~~~~dp~~~~~~a~el~~~L~~~l~~~~~~v~~g~~ 747 (856)
.+..... +.....++.......-..+.. ......+.+. .++ .+.+.+ ...+......+..+..
T Consensus 78 ~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~----~~~~~~----~~~~~~~~~~i~~~~~ 141 (225)
T d1l6ra_ 78 IKKFFSN-------EGTNKFLEEMSKRTSMRSILTNRWREASTGFD-IDP----EDVDYV----RKEAESRGFVIFYSGY 141 (225)
T ss_dssp EEESSCS-------HHHHHHHHHHTTTSSCBCCGGGGGCSSSEEEB-CCG----GGHHHH----HHHHHTTTEEEEEETT
T ss_pred EEEecCh-------HHHHHHHHHHHHhcCcceeecccceeeeeccc-cCH----HHHHHH----HHHHhhcCcEEEECCc
Confidence 5443211 122222332222211111000 0000111111 111 122333 3333445677888889
Q ss_pred EEEEEeCCCCHHHHHHHHHHHhhhcCCCcceEEEEeCCchhHHHHHHccccccCCCCCCCccEEEEEeCCC----ccccc
Q 003025 748 IVEVKPQGVSKGVVAEKIFTTMAESGRHADFVLCIGDDRSDEDMFEIIGNATSSGVLSSNASVFACTVGQK----PSKAK 823 (856)
Q Consensus 748 ~vEI~p~gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~----~s~A~ 823 (856)
.+|+.|.++|||.+++++++++ |+++++|++||||.||++||+.++. +|+||++ +..|+
T Consensus 142 ~~~i~~~~~~K~~ai~~l~~~~---~i~~~~v~~~GDs~nD~~m~~~a~~--------------~vav~na~~~~k~~ad 204 (225)
T d1l6ra_ 142 SWHLMNRGEDKAFAVNKLKEMY---SLEYDEILVIGDSNNDMPMFQLPVR--------------KACPANATDNIKAVSD 204 (225)
T ss_dssp EEEEEETTCSHHHHHHHHHHHT---TCCGGGEEEECCSGGGHHHHTSSSE--------------EEECTTSCHHHHHHCS
T ss_pred EEEecCCccchHHHHHHHhhhh---ccchhheeeecCCcchHHHHHHCCe--------------EEEECCCcHHHHHhCC
Confidence 9999999999999999999999 9999999999999999999999984 6888875 47899
Q ss_pred eEcC--ChhHHHHHHHHH
Q 003025 824 YYLD--DAAEVVTMLEAL 839 (856)
Q Consensus 824 y~l~--~~~eV~~~L~~L 839 (856)
|++. +.++|+++|+.+
T Consensus 205 ~v~~~~~~~gi~~~l~~~ 222 (225)
T d1l6ra_ 205 FVSDYSYGEEIGQIFKHF 222 (225)
T ss_dssp EECSCCTTHHHHHHHHHT
T ss_pred EEECCCCcCHHHHHHHHh
Confidence 9885 558999999875
|
| >d1rzua_ c.87.1.8 (A:) Glycogen synthase 1, GlgA {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Glycogen synthase 1, GlgA species: Agrobacterium tumefaciens [TaxId: 358]
Probab=99.89 E-value=1.5e-22 Score=231.22 Aligned_cols=315 Identities=14% Similarity=0.174 Sum_probs=210.4
Q ss_pred HhHHHHHHHHHHHHHHHHHHc---CCCCCEEEEeCcccchHHHHHH-hhcCCCeEEEEEccCCC----ChHHHhcCC---
Q 003025 177 SLWEAYVSANKIFSQRVIEVI---NPEDDYVWIHDYHLMVLPTFLR-RRFTRLRMGFFLHSPFP----SSEIYRTLP--- 245 (856)
Q Consensus 177 ~~w~~Y~~vN~~fa~~i~~~~---~~~~D~VwihDyhl~llp~~lr-~~~~~~~i~~flH~PfP----~~e~~~~lp--- 245 (856)
..|..|...++.+++.+.+.. +| |+|++||+|-.+.+.+++ .+.+++++.+++|.... ....+..+.
T Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~p--DIvH~h~~~~~l~~~~~~~~~~~~ip~V~t~H~~~~~~~~~~~~~~~~~~~~ 183 (477)
T d1rzua_ 106 DNWKRFAALSLAAARIGAGVLPGWRP--DMVHAHDWQAAMTPVYMRYAETPEIPSLLTIHNIAFQGQFGANIFSKLALPA 183 (477)
T ss_dssp THHHHHHHHHHHHHHHHTTCSSSCCC--SEEEEEHHHHTTHHHHHHHSSSCCCCEEEEESCTTCCCEECGGGGGGSCCCG
T ss_pred ccHHHHHHHHHHHHhhhhhcccCCCC--CEEEecchhHHHHHHHHHHhhCCCCCEEEEEecccccccCCHHHHHHhhcch
Confidence 468888888888887665543 45 999999999999998886 45678999999996421 111221111
Q ss_pred ------------chHHHHHHhHhCCEEcccCHHHHHHHHHHHHhhhCceecccCceeeEEECCEEEEEEEeecccCchHH
Q 003025 246 ------------VREEILKALLNADLIGFHTFDYARHFLSCCSRMLGLEYQSKRGYIGLEYYGRTVGIKIMPVGIHMGQI 313 (856)
Q Consensus 246 ------------~r~eil~~ll~~dligf~t~~~~~~Fl~~~~r~lg~~~~~~~~~~~~~~~gr~~~i~i~p~GId~~~~ 313 (856)
...-+..++..+|.+-.-+..|++..+..-. ..+.+.- ...+..++.++|+|||.+.|
T Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~ad~~~~vs~~~~~~~~~~~~-~~~~~~~---------~~~~~~~~~vi~ngv~~~~~ 253 (477)
T d1rzua_ 184 HAFGMEGIEYYNDVSFLKGGLQTATALSTVSPSYAEEILTAEF-GMGLEGV---------IGSRAHVLHGIVNGIDADVW 253 (477)
T ss_dssp GGSSTTTTEETTEEEHHHHHHHHCSEEEESCHHHHHHTTSHHH-HTTCHHH---------HHTTGGGEEECCCCBCTTTS
T ss_pred hhcccccccccchhHHHHHHHHhhhhhhhccHHHHHHHHHHhc-Ccchhhh---------hhhccccEEEEECCcchhhc
Confidence 0112344677889988888888776643210 0111100 00112246678999998876
Q ss_pred HHHhcC-----------chHHHHHHHHHHHc----CCCeEEEeccCccccCCHHHHHHHHHHHHHhCCCCcCceEEEEEe
Q 003025 314 ESVLRL-----------ADKDWRVQELKQQF----EGKTVLLGVDDMDIFKGVDLKLLAMEHLLKQHPKWQGRAVLVQIA 378 (856)
Q Consensus 314 ~~~~~~-----------~~~~~~~~~l~~~~----~~k~iil~VdRld~~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~ 378 (856)
.+.... .......+.++.++ +++++|+++||+++.||++.+++|+++++++++. |+.+|
T Consensus 254 ~p~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~vgrl~~~KG~~~Ll~a~~~~~~~~~~------l~~~G 327 (477)
T d1rzua_ 254 NPATDHLIHDNYSAANLKNRALNKKAVAEHFRIDDDGSPLFCVISRLTWQKGIDLMAEAVDEIVSLGGR------LVVLG 327 (477)
T ss_dssp CTTTCTTSSSCCBTTBCTTHHHHHHHHHHHHTCCCSSSCEEEEESCBSTTTTHHHHHTTHHHHHHTTCE------EEEEE
T ss_pred cccccccccccchhhhHHHhhhhHHHHHHhcccccCCccEEEEEeeeeecCCcHHHHHHHHHHHhhCCe------EEEEe
Confidence 532110 01122233344443 3567999999999999999999999999887543 55555
Q ss_pred cCCCCCchhHHHHHHHHHHHHHHHhcccCCCCcccEEEEcCCCCHHHHHHHHHhcceeeeccccccCCCcccceeeeecC
Q 003025 379 NPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDKPVTLSERAAYYTIAECVVVTAVRDGMNLTPYEYIVCRQG 458 (856)
Q Consensus 379 ~p~r~~~~~~~~l~~~~~~lv~~IN~~~~~~~~~pvv~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~a~~~~ 458 (856)
.+ +. ....++.++..+.+.+ + .+.+..+.+++..+|+.||+||+||.+||||+|++|||+|+
T Consensus 328 ~G-----~~--~~~~~~~~~~~~~~~~--------v-~~~~~~~~~~~~~~~~~aD~~v~PS~~E~fglv~lEAma~G-- 389 (477)
T d1rzua_ 328 AG-----DV--ALEGALLAAASRHHGR--------V-GVAIGYNEPLSHLMQAGCDAIIIPSRFEPCGLTQLYALRYG-- 389 (477)
T ss_dssp CB-----CH--HHHHHHHHHHHHTTTT--------E-EEEESCCHHHHHHHHHHCSEEEECCSCCSSCSHHHHHHHHT--
T ss_pred cC-----Cc--hHHHHHHHHHhhcCCe--------E-EEEcccChhHHHHHHHhCccccCCccccCCCHHHHHHHHcC--
Confidence 32 22 2223344444443322 3 34456788899999999999999999999999999999994
Q ss_pred CCCCCCCCCCCCCCCceEEecCCcccccccC------------CceeeCCCCHHHHHHHHHHHHcC--CHHHHHHHHHHH
Q 003025 459 VSGSESSSESSAPKKSMLVVSEFIGCSPSLS------------GAIRVNPWNIEATAEAMHEAIQM--NEAEKQLRHEKH 524 (856)
Q Consensus 459 ~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~------------~al~VnP~d~~~~A~ai~~aL~m--~~~er~~r~~~~ 524 (856)
.|+|+|+.+|..+.+. .|++|+|.|++++|+||.++|+. +++.++++.++.
T Consensus 390 ---------------~PvVas~~GG~~E~v~d~~~~~~~~~~~~G~l~~~~d~~~la~ai~~~l~~~~~~~~~~~~~~~a 454 (477)
T d1rzua_ 390 ---------------CIPVVARTGGLADTVIDANHAALASKAATGVQFSPVTLDGLKQAIRRTVRYYHDPKLWTQMQKLG 454 (477)
T ss_dssp ---------------CEEEEESSHHHHHHCCBCCHHHHHTTCCCBEEESSCSHHHHHHHHHHHHHHHTCHHHHHHHHHHH
T ss_pred ---------------CCEEEcCCCCCcceeecCCccccccCCCceEEeCCCCHHHHHHHHHHHHhhhCCHHHHHHHHHHH
Confidence 4999999999999872 47999999999999999998863 334333333322
Q ss_pred hhhhhcCCHHHHHHHHHHHH
Q 003025 525 YRYVSTHDVAYWARSFFQDM 544 (856)
Q Consensus 525 ~~~v~~~~~~~W~~~~l~~l 544 (856)
. -..+++..-++++++--
T Consensus 455 ~--~~~fsw~~~a~~~~~lY 472 (477)
T d1rzua_ 455 M--KSDVSWEKSAGLYAALY 472 (477)
T ss_dssp H--TCCCBHHHHHHHHHHHH
T ss_pred H--HhhCCHHHHHHHHHHHH
Confidence 2 23477777777765533
|
| >d2bisa1 c.87.1.8 (A:1-437) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Glycogen synthase 1, GlgA species: Pyrococcus abyssi [TaxId: 29292]
Probab=99.89 E-value=2.7e-22 Score=224.41 Aligned_cols=290 Identities=16% Similarity=0.163 Sum_probs=212.4
Q ss_pred CCEEEEeCcccchHHHHHHhhcCCCeEEEEEccCCCCh---HHHh------cCC--chHHHHHHhHhCCEEcccCHHHHH
Q 003025 201 DDYVWIHDYHLMVLPTFLRRRFTRLRMGFFLHSPFPSS---EIYR------TLP--VREEILKALLNADLIGFHTFDYAR 269 (856)
Q Consensus 201 ~D~VwihDyhl~llp~~lr~~~~~~~i~~flH~PfP~~---e~~~------~lp--~r~eil~~ll~~dligf~t~~~~~ 269 (856)
.|+|++|+++..+++.++++. .++++.+.+|..++.. ..+. ... .......+...+|.+...+..++.
T Consensus 121 pDiIh~~~~~~~~~~~~~~~~-~~~~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~v~~~~~~~~~ 199 (437)
T d2bisa1 121 PDVVHFHDWHTVFAGALIKKY-FKIPAVFTIHRLNKSKLPAFYFHEAGLSELAPYPDIDPEHTGGYIADIVTTVSRGYLI 199 (437)
T ss_dssp CSEEEEETGGGHHHHHHHHHH-HCCCEEEEESSCCCCCEEHHHHHHTTCGGGCCSSEECHHHHHHHHSSEEEESCHHHHH
T ss_pred CCEEEECChhhhhHhhhhhcc-ccCceeEEEeeccccccchhhhhhccchhhhhHHHHHHHHHHHHhhhhhcccchhhhh
Confidence 399999999988777777655 5799999999987642 1111 111 112234456678988877765554
Q ss_pred HHHHHHHhhhCceecccCceeeEEECCEEEEEEEeecccCchHHHHHhcCchHHHHHHHHHHHc--CCCeEEEeccCccc
Q 003025 270 HFLSCCSRMLGLEYQSKRGYIGLEYYGRTVGIKIMPVGIHMGQIESVLRLADKDWRVQELKQQF--EGKTVLLGVDDMDI 347 (856)
Q Consensus 270 ~Fl~~~~r~lg~~~~~~~~~~~~~~~gr~~~i~i~p~GId~~~~~~~~~~~~~~~~~~~l~~~~--~~k~iil~VdRld~ 347 (856)
.... .++.. ..++.++|+|+|++.|.+....+........++.++ .++++|+++||++.
T Consensus 200 ~~~~----~~~~~---------------~~ki~vi~~g~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~G~~~~ 260 (437)
T d2bisa1 200 DEWG----FFRNF---------------EGKITYVFNGIDCSFWNESYLTGSRDERKKSLLSKFGMDEGVTFMFIGRFDR 260 (437)
T ss_dssp HTHH----HHGGG---------------TTTEEECCCCCCTTTSCGGGCCSCHHHHHHHHHHHTTCCSCEEEEEESCBCS
T ss_pred hhhh----hhccc---------------cCceEEEecccccccccccccchhhHHHHHhhhhhhhccCCceEEEeecccc
Confidence 3322 11110 013567899999998876655444445555666666 46789999999975
Q ss_pred -cCCHHHHHHHHHHHHHh--CCCCcCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCcccEEEEcCCCCHH
Q 003025 348 -FKGVDLKLLAMEHLLKQ--HPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDKPVTLS 424 (856)
Q Consensus 348 -~KGi~~~l~A~~~ll~~--~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~~~~lv~~IN~~~~~~~~~pvv~~~~~v~~~ 424 (856)
.||+..+++|++.+..+ +|+ +.|+.+|... +.++.. ++.+.. . ...++++.+.++.+
T Consensus 261 ~~Kg~~~ll~a~~~~~~~~~~~~----~~lvi~G~~~----~~~~~~---~~~~~~----~-----~~~~~~~~~~~~~~ 320 (437)
T d2bisa1 261 GQKGVDVLLKAIEILSSKKEFQE----MRFIIIGKGD----PELEGW---ARSLEE----K-----HGNVKVITEMLSRE 320 (437)
T ss_dssp SSSCHHHHHHHHHHHTTSGGGGG----EEEEEECCBC----HHHHHH---HHHHHH----T-----CTTEEEECSCCCHH
T ss_pred cchhHHHHHhhhccccccccccc----ceeeeecccc----cccccc---hhhhcc----c-----cccceeccccCcHH
Confidence 79999999999998654 344 5588777421 222222 222211 1 22366788899999
Q ss_pred HHHHHHHhcceeeeccccccCCCcccceeeeecCCCCCCCCCCCCCCCCceEEecCCcccccccC--CceeeCCCCHHHH
Q 003025 425 ERAAYYTIAECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIGCSPSLS--GAIRVNPWNIEAT 502 (856)
Q Consensus 425 el~aly~~ADv~vvtS~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~--~al~VnP~d~~~~ 502 (856)
++..+|+.||++++||..||+|++++|||+|+. |+|+|+.+|+.+.+. .|++|+|.|++++
T Consensus 321 ~~~~~~~~adi~v~~s~~e~~~~~~~Eama~G~-----------------Pvi~~~~g~~~e~i~~~~G~~~~~~d~~~l 383 (437)
T d2bisa1 321 FVRELYGSVDFVIIPSYFEPFGLVALEAMCLGA-----------------IPIASAVGGLRDIITNETGILVKAGDPGEL 383 (437)
T ss_dssp HHHHHHTTCSEEEECCSCCSSCHHHHHHHTTTC-----------------EEEEESCTTHHHHCCTTTCEEECTTCHHHH
T ss_pred HHHHHHhhhccccccccccccchHHHHHHHCCC-----------------CEEEeCCCCcHHhEECCcEEEECCCCHHHH
Confidence 999999999999999999999999999999954 999999999888774 4899999999999
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHhhhhhcCCHHHHHHHHHHHHHHH
Q 003025 503 AEAMHEAIQMNEAEKQLRHEKHYRYVSTHDVAYWARSFFQDMERT 547 (856)
Q Consensus 503 A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~l~~~ 547 (856)
|++|.++|+++++.++...++.++.++.+++..+++++++-.+++
T Consensus 384 a~~i~~ll~~~~~~~~~~~~~~~~~~~~~s~~~~a~~~~~iY~~~ 428 (437)
T d2bisa1 384 ANAILKALELSRSDLSKFRENCKKRAMSFSWEKSAERYVKAYTGS 428 (437)
T ss_dssp HHHHHHHHTTTTSCTHHHHHHHHHHHHHSCHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHhCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHH
Confidence 999999998777777777777888888899999999888765544
|
| >d1wzca1 c.108.1.10 (A:1-243) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=99.87 E-value=5.3e-23 Score=212.20 Aligned_cols=211 Identities=16% Similarity=0.106 Sum_probs=137.3
Q ss_pred CcEEEEEecCCCCCCCCCCCCCCCHHHHHHHHHHHhhCCCeEEEecCCChhhHHHhhcCCC-CccEEeeCCEEEEeCCCc
Q 003025 590 KSRAILFDYDGTVMPQTSINKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSPCK-KLGIAAEHGYFMRWSADE 668 (856)
Q Consensus 590 ~~rlI~~DlDGTLl~~~~~~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~~~-~lgliaenG~~I~~~~~~ 668 (856)
|+|+|++|+||||++ ... +++++++|++| ++.|+.|++||||++..+..++..++ ...++++||+.+...++.
T Consensus 1 miKli~~DlDGTLl~---~~~--~~~~~~ai~~l-~~~G~~~~~aTGR~~~~~~~~~~~~~~~~~~i~~nGa~i~~~~~~ 74 (243)
T d1wzca1 1 MIRLIFLDIDKTLIP---GYE--PDPAKPIIEEL-KDMGFEIIFNSSKTRAEQEYYRKELEVETPFISENGSAIFIPKGY 74 (243)
T ss_dssp CEEEEEECCBTTTBS---SSC--SGGGHHHHHHH-HHTTEEEEEECSSCHHHHHHHHHHHTCCSCEEETTTTEEEECTTC
T ss_pred CcEEEEEeCCCCCCC---CCC--CHHHHHHHHHH-HHCCCEEEEEeCCCHHHHHHHHHHhcccccccccCCcEEEcCCCc
Confidence 689999999999997 433 57789999997 88899999999999999999997764 456899999999887653
Q ss_pred ceEecCCC---------CcccHHHHHHHHHH---HHhhcCCcceE-----------Ee--------cccceEEeeecCCC
Q 003025 669 EWQNCGQS---------VDFGWIQIAEPVMK---LYTESTDGSYI-----------EI--------KESALVWHHRDADP 717 (856)
Q Consensus 669 ~w~~~~~~---------~~~~w~~~v~~i~~---~~~~~~~Gs~i-----------e~--------k~~~l~~~~~~~dp 717 (856)
........ ....+ ..+...+. ........... .. ....... ....
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-- 150 (243)
T d1wzca1 75 FPFDVKGKEVGNYIVIELGIRV-EKIREELKKLENIYGLKYYGNSTKEEIEKFTGMPPELVPLAMEREYSETI-FEWS-- 150 (243)
T ss_dssp CC----------CEEEECSCCH-HHHHHHHHHHHHHHTCBCGGGSCHHHHHHHHCCCGGGHHHHTCCSSEEEE-CBCS--
T ss_pred eecccchhHHHHHHHHHHhhhH-HHHHHHHHhhhhhcccchhhhhhHHHHHHhhcCchhHHHHHHhhhcchhh-hhhh--
Confidence 22111100 00111 11111111 11100000000 00 0000000 0000
Q ss_pred CCCchhHHHHHHHHHHHhcCCCeEEEEcCeEEEEEeCCCCHHHHHHHHHHHhhhcCCCcceEEEEeCCchhHHHHHHccc
Q 003025 718 GFGSSQAKELLDHLESVLANEPAAVKSGQFIVEVKPQGVSKGVVAEKIFTTMAESGRHADFVLCIGDDRSDEDMFEIIGN 797 (856)
Q Consensus 718 ~~~~~~a~el~~~L~~~l~~~~~~v~~g~~~vEI~p~gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~ 797 (856)
. ....+ ........+..+ ..+++.|.+++||.|++++++++. ++++++++||||+.||++||++++.
T Consensus 151 ~---~~~~~-------~~~~~~~~~~~~-~~~~~~~~~~~K~~al~~l~~~~~--~~~~~~~~a~GD~~ND~~Ml~~a~~ 217 (243)
T d1wzca1 151 R---DGWEE-------VLVEGGFKVTMG-SRFYTVHGNSDKGKAAKILLDFYK--RLGQIESYAVGDSYNDFPMFEVVDK 217 (243)
T ss_dssp S---SCHHH-------HHHHTTCEEEEC-SSSEEEECSCCHHHHHHHHHHHHH--TTSCEEEEEEECSGGGHHHHTTSSE
T ss_pred h---HHHHH-------hhhhcCeEEeec-ccccchhhhhccHHHHHHHHHHhc--CCCcccEEEEcCCHhHHHHHHcCCc
Confidence 0 00111 111223444444 457899999999999999999872 3788999999999999999999985
Q ss_pred cccCCCCCCCccEEEEEeCCCccccceEcCChhHHHHHHH
Q 003025 798 ATSSGVLSSNASVFACTVGQKPSKAKYYLDDAAEVVTMLE 837 (856)
Q Consensus 798 ~~~~~~~~~~~~~~av~vG~~~s~A~y~l~~~~eV~~~L~ 837 (856)
+|+|||+..+++-.+++..|+.++++
T Consensus 218 --------------~va~~Na~~~~~~~~~~i~~~~~~i~ 243 (243)
T d1wzca1 218 --------------VFIVGSLKHKKAQNVSSIIDVLEVIK 243 (243)
T ss_dssp --------------EEEESSCCCTTCEEESCHHHHHHHHT
T ss_pred --------------EEEeCCCChHHHhhhhHHHHHHHhhC
Confidence 78999998888888999988888763
|
| >d1s2oa1 c.108.1.10 (A:1-244) Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc 6803 [TaxId: 1148]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sucrose-phosphatase Slr0953 species: Synechocystis sp. pcc 6803 [TaxId: 1148]
Probab=99.87 E-value=2e-22 Score=209.07 Aligned_cols=217 Identities=12% Similarity=0.112 Sum_probs=141.2
Q ss_pred CcEEEEEecCCCCCCCCCCCCCCCHHHHHHHHHHHhhCCCeEEEecCCChhhHHHhhcCCC---CccEEeeCCEEEEeCC
Q 003025 590 KSRAILFDYDGTVMPQTSINKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSPCK---KLGIAAEHGYFMRWSA 666 (856)
Q Consensus 590 ~~rlI~~DlDGTLl~~~~~~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~~~---~lgliaenG~~I~~~~ 666 (856)
++.||++|+||||++ .++.+ +.++++.++ .++|+.|+++|||++..+.+++..+. .-.++++||+.|....
T Consensus 2 ~~~li~~DlDGTL~~---~~~~~--~~~~~~~~~-~~~g~~v~i~TGR~~~~~~~~~~~~~~~~~~~~i~~~G~~i~~~~ 75 (244)
T d1s2oa1 2 RQLLLISDLDNTWVG---DQQAL--EHLQEYLGD-RRGNFYLAYATGRSYHSARELQKQVGLMEPDYWLTAVGSEIYHPE 75 (244)
T ss_dssp CSEEEEECTBTTTBS---CHHHH--HHHHHHHHT-TGGGEEEEEECSSCHHHHHHHHHHHTCCCCSEEEETTTTEEEETT
T ss_pred CceEEEEECcccCCC---CCCCH--HHHHHHHHH-HcCCCEEEEECCCCHHHHHHHHHHcCCCCCceEEeccceEEEEcc
Confidence 456889999999998 44433 456666664 77899999999999999999886532 2347899999988765
Q ss_pred Ccc--eEecCCCCcccHHHHHHHHHHHHhhcCCcceEE----ecccceEEeeecCCCCCCchhHHHHHHHHHHHhcCCCe
Q 003025 667 DEE--WQNCGQSVDFGWIQIAEPVMKLYTESTDGSYIE----IKESALVWHHRDADPGFGSSQAKELLDHLESVLANEPA 740 (856)
Q Consensus 667 ~~~--w~~~~~~~~~~w~~~v~~i~~~~~~~~~Gs~ie----~k~~~l~~~~~~~dp~~~~~~a~el~~~L~~~l~~~~~ 740 (856)
... |..... ..|. ...+..+....++.... .....+.+.+...... ...+++...+.+.. ....
T Consensus 76 ~~~~~~~~~~~---~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~-~~~~ 145 (244)
T d1s2oa1 76 GLDQHWADYLS---EHWQ---RDILQAIADGFEALKPQSPLEQNPWKISYHLDPQACP---TVIDQLTEMLKETG-IPVQ 145 (244)
T ss_dssp EECHHHHHHHH---TTCC---HHHHHHHHHTCTTEEECCGGGCBTTBEEEEECTTSCT---HHHHHHHHHHHTSS-CCEE
T ss_pred CcchHHHHHHH---HHHh---HHHHHHHHhhcccccccChhhhcceEEEEeccccccH---HHHHHHHHHHHhhc-ccce
Confidence 421 211110 0111 11222333333333322 2233344444322211 12333333332221 1235
Q ss_pred EEEEcCeEEEEEeCCCCHHHHHHHHHHHhhhcCCCcceEEEEeCCchhHHHHHHccccccCCCCCCCccEEEEEeCCCc-
Q 003025 741 AVKSGQFIVEVKPQGVSKGVVAEKIFTTMAESGRHADFVLCIGDDRSDEDMFEIIGNATSSGVLSSNASVFACTVGQKP- 819 (856)
Q Consensus 741 ~v~~g~~~vEI~p~gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~~- 819 (856)
....+..++||.|.+++||.|++++++++ |++.+++++||||.||++||+.++. +|+|||+.
T Consensus 146 ~~~~~~~~~~i~~~~~~K~~a~~~l~~~~---gi~~~~~v~~GD~~ND~~Ml~~~~~--------------~vav~na~~ 208 (244)
T d1s2oa1 146 VIFSSGKDVDLLPQRSNKGNATQYLQQHL---AMEPSQTLVCGDSGNDIGLFETSAR--------------GVIVRNAQP 208 (244)
T ss_dssp EEEETTTEEEEEETTCSHHHHHHHHHHHT---TCCGGGEEEEECSGGGHHHHTSSSE--------------EEECTTCCH
T ss_pred eeecCCcEEEEEeCccchhHHHHHHHHhc---cCChhhEEEEcCCCCCHHHHhhCCc--------------EEEeCCCCH
Confidence 56677889999999999999999999999 9999999999999999999999984 78998852
Q ss_pred ---cccc-------eEcC--ChhHHHHHHHHH
Q 003025 820 ---SKAK-------YYLD--DAAEVVTMLEAL 839 (856)
Q Consensus 820 ---s~A~-------y~l~--~~~eV~~~L~~L 839 (856)
..|+ |+.. +.++|++.|+.+
T Consensus 209 ~lk~~a~~~~~~~~~~~~~~~~~Gi~e~l~~f 240 (244)
T d1s2oa1 209 ELLHWYDQWGDSRHYRAQSSHAGAILEAIAHF 240 (244)
T ss_dssp HHHHHHHHHCCTTEEECSSCHHHHHHHHHHHT
T ss_pred HHHHHhhcccccceEEcCCCCccHHHHHHHHh
Confidence 3333 4432 357788888764
|
| >d1xvia_ c.108.1.10 (A:) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) species: Escherichia coli [TaxId: 562]
Probab=99.86 E-value=5.4e-22 Score=202.64 Aligned_cols=203 Identities=15% Similarity=0.106 Sum_probs=126.8
Q ss_pred cEEEEEecCCCCCCCCCCCCCCCHHHHHHHHHHHhhCCCeEEEecCCChhhHHHhhcCCC--CccEEeeCCEEEEeCCCc
Q 003025 591 SRAILFDYDGTVMPQTSINKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSPCK--KLGIAAEHGYFMRWSADE 668 (856)
Q Consensus 591 ~rlI~~DlDGTLl~~~~~~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~~~--~lgliaenG~~I~~~~~~ 668 (856)
..|||+|+||||++ .++.++++++++|++| +++|+.|+++|||+..++.+.+..+. ...++++||+.|......
T Consensus 4 ~~li~~DlDGTLl~---~~~~i~~~~~~al~~l-~~~Gi~~~i~TGR~~~~~~~~~~~~~~~~~~~i~~nGa~i~~~~~~ 79 (232)
T d1xvia_ 4 PLLVFSDLDGTLLD---SHSYDWQPAAPWLTRL-REANVPVILCSSKTSAEMLYLQKTLGLQGLPLIAENGAVIQLAEQW 79 (232)
T ss_dssp CEEEEEECTTTTSC---SSCCSCCTTHHHHHHH-HHTTCCEEEECSSCHHHHHHHHHHTTCTTSCEEEGGGTEEECCTTC
T ss_pred CEEEEEECCCCccC---CcCcCCHHHHHHHHHH-HHCCCEEEEEeCCChhhchhHHHHhccCCceEEccCCeEEEecCCc
Confidence 35899999999998 7788999999999997 88899999999999999999997653 467999999999876542
Q ss_pred ceEecC----CCCcccHHHHHHHHHH-HHhhcCCcce-EEecccceEEee----------ecCCCCCCchhHHHHHHHHH
Q 003025 669 EWQNCG----QSVDFGWIQIAEPVMK-LYTESTDGSY-IEIKESALVWHH----------RDADPGFGSSQAKELLDHLE 732 (856)
Q Consensus 669 ~w~~~~----~~~~~~w~~~v~~i~~-~~~~~~~Gs~-ie~k~~~l~~~~----------~~~dp~~~~~~a~el~~~L~ 732 (856)
...... ......+......... .+........ ..........++ .............+....+.
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (232)
T d1xvia_ 80 QEIDGFPRIISGISHGEISLVLNTLREKEHFKFTTFDDVDDATIAEWTGLSRSQAALTQLHEASVTLIWRDSDERMAQFT 159 (232)
T ss_dssp TTSTTTTEEECSSCHHHHHHHHHHHHHHHCCCEEEGGGSCHHHHHHHHCCCHHHHHHHHCCSSCEEEEECSCHHHHHHHH
T ss_pred cccchhhhhhhHHHHHHHHHhhhhhhhhhccccccccchhhhhhhhhhcccchhhhhhhhcceeeeecccccHHHHHHHH
Confidence 211100 0111111111111111 1100000000 000000000000 00000000000112222333
Q ss_pred HHhcCCCeEEEEcCeEEEEEeCCCCHHHHHHHHHHHhhhcCCCcceEEEEeCCchhHHHHHHccc
Q 003025 733 SVLANEPAAVKSGQFIVEVKPQGVSKGVVAEKIFTTMAESGRHADFVLCIGDDRSDEDMFEIIGN 797 (856)
Q Consensus 733 ~~l~~~~~~v~~g~~~vEI~p~gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~ 797 (856)
.........+..+..++++.|.+++||.|+++|++.+...|++++++++|||+.||++||++++.
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~K~~~~~~l~~~~~~l~i~~~~~iafGD~~NDl~Ml~~a~~ 224 (232)
T d1xvia_ 160 ARLNELGLQFMQGARFWHVLDASAGKDQAANWIIATYQQLSGKRPTTLGLGDGPNDAPLLEVMDY 224 (232)
T ss_dssp HHHHHTTEEEEECSSCEEEEETTCCHHHHHHHHHHHHHHHHSSCCEEEEEESSGGGHHHHHTSSE
T ss_pred HHhhhccceeeeccceeeccCCCchHHHHHHHHHHHHHHcCCChhcEEEEcCCHhHHHHHHhCCe
Confidence 33334456777888899999999999999999998754448999999999999999999999995
|
| >d2bfwa1 c.87.1.8 (A:218-413) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Glycogen synthase 1, GlgA species: Pyrococcus abyssi [TaxId: 29292]
Probab=99.83 E-value=2.2e-20 Score=187.43 Aligned_cols=189 Identities=17% Similarity=0.182 Sum_probs=148.3
Q ss_pred ccCchHHHHHhcCchHHHHHHHHHHHc--CCCeEEEeccCcc-ccCCHHHHHHHHHHHHHhCCCCcCceEEEEEecCCCC
Q 003025 307 GIHMGQIESVLRLADKDWRVQELKQQF--EGKTVLLGVDDMD-IFKGVDLKLLAMEHLLKQHPKWQGRAVLVQIANPARG 383 (856)
Q Consensus 307 GId~~~~~~~~~~~~~~~~~~~l~~~~--~~k~iil~VdRld-~~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~ 383 (856)
|||.+.|.+........+....++++| +++++|++|||++ +.||+..+++|++.|.++.+.. ++.|+.+|..
T Consensus 1 gid~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~il~~Grl~~~~Kg~~~li~a~~~l~~~~~~~--~~~l~i~G~g--- 75 (196)
T d2bfwa1 1 GIDCSFWNESYLTGSRDERKKSLLSKFGMDEGVTFMFIGRFDRGQKGVDVLLKAIEILSSKKEFQ--EMRFIIIGKG--- 75 (196)
T ss_dssp CCCTTTSSGGGSCSCHHHHHHHHHHHTTCCSCEEEEEESCBCSSSSCHHHHHHHHHHHTTSGGGG--GEEEEEECCB---
T ss_pred CcChhhcCCCCCCchhHHHHHHHHHHhCCCCCCEEEEEcCCCccccCHHHHHHHHHhhhcccCCC--CeEEEEEeec---
Confidence 899999987665556667778888887 5788999999997 5899999999999997653221 3558888742
Q ss_pred CchhHHHHHHHHHHHHHHHhcccCCCCcccEEEEcCCCCHHHHHHHHHhcceeeeccccccCCCcccceeeeecCCCCCC
Q 003025 384 RGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDKPVTLSERAAYYTIAECVVVTAVRDGMNLTPYEYIVCRQGVSGSE 463 (856)
Q Consensus 384 ~~~~~~~l~~~~~~lv~~IN~~~~~~~~~pvv~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~a~~~~~~~~~ 463 (856)
.+.++. .++.+... + ..++++.+.++.+++..+|+.||++|+||..||+|++.+|||+|+.
T Consensus 76 -~~~~~~---~~~~~~~~----~-----~~~~~~~~~~~~~~l~~~~~~~di~v~ps~~e~~~~~~~Eam~~G~------ 136 (196)
T d2bfwa1 76 -DPELEG---WARSLEEK----H-----GNVKVITEMLSREFVRELYGSVDFVIIPSYFEPFGLVALEAMCLGA------ 136 (196)
T ss_dssp -CHHHHH---HHHHHHHH----C-----TTEEEECSCCCHHHHHHHHTTCSEEEECCSCCSSCHHHHHHHHTTC------
T ss_pred -ccchhh---hhhhhhhc----c-----ceeEEeeeccccccchhccccccccccccccccccccchhhhhcCc------
Confidence 133333 33333222 2 2366788899999999999999999999999999999999999954
Q ss_pred CCCCCCCCCCceEEecCCcccccccC--CceeeCCCCHHHHHHHHHHHHcCCHHHHHHHHHHHhhhhhc
Q 003025 464 SSSESSAPKKSMLVVSEFIGCSPSLS--GAIRVNPWNIEATAEAMHEAIQMNEAEKQLRHEKHYRYVST 530 (856)
Q Consensus 464 ~~~~~~~~~~g~lV~Se~~G~~~~l~--~al~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~ 530 (856)
|+|+|..+|..+.+. .|++++|.|+++++++|.++|.+..+.+....+..+++..+
T Consensus 137 -----------pvI~~~~~~~~e~i~~~~g~~~~~~~~~~l~~~i~~~l~~~~~~~~~~~~~a~~~a~~ 194 (196)
T d2bfwa1 137 -----------IPIASAVGGLRDIITNETGILVKAGDPGELANAILKALELSRSDLSKFRENCKKRAMS 194 (196)
T ss_dssp -----------EEEEESCHHHHHHCCTTTCEEECTTCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
T ss_pred -----------eeeecCCCccceeecCCceeeECCCCHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHh
Confidence 999999988888774 48999999999999999999998877666655555655543
|
| >d2amya1 c.108.1.10 (A:4-246) Phosphomannomutase 2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphomannomutase 2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.82 E-value=3.1e-20 Score=190.33 Aligned_cols=216 Identities=16% Similarity=0.169 Sum_probs=132.8
Q ss_pred CcEEEEEecCCCCCCCCCCCCCCCHHHHHHHHHHHhhCCCeEEEecCCChhhHHHhhcCC---CCccEEeeCCEEEEeCC
Q 003025 590 KSRAILFDYDGTVMPQTSINKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSPC---KKLGIAAEHGYFMRWSA 666 (856)
Q Consensus 590 ~~rlI~~DlDGTLl~~~~~~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~~---~~lgliaenG~~I~~~~ 666 (856)
..||++||+||||++ +++.++++++++|++| ++.| .++++|||+...+...+... ....++..+|+++...+
T Consensus 2 ~~kl~~fDlDGTLl~---~~~~i~~~~~~al~~l-~~~g-~~~i~Tgr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 76 (243)
T d2amya1 2 GPALCLFDVDGTLTA---PRQKITKEMDDFLQKL-RQKI-KIGVVGGSDFEKVQEQLGNDVVEKYDYVFPENGLVAYKDG 76 (243)
T ss_dssp CSEEEEEESBTTTBC---TTSCCCHHHHHHHHHH-TTTS-EEEEECSSCHHHHHHHHCTTHHHHCSEEESGGGTEEEETT
T ss_pred CCEEEEEcCcCCeeC---CCCcCCHHHHHHHHHH-HcCC-CEEEEcCCChHHhHHHHhhhccccceEEecCcEEEEecCC
Confidence 479999999999999 8899999999999997 6655 68899999998887777543 12334455676666665
Q ss_pred CcceEecCCCC-cccHHH-HHHHHHHHHhhcCC----cceEEecccceEEeeecCCCCCC-----------chhHHHHHH
Q 003025 667 DEEWQNCGQSV-DFGWIQ-IAEPVMKLYTESTD----GSYIEIKESALVWHHRDADPGFG-----------SSQAKELLD 729 (856)
Q Consensus 667 ~~~w~~~~~~~-~~~w~~-~v~~i~~~~~~~~~----Gs~ie~k~~~l~~~~~~~dp~~~-----------~~~a~el~~ 729 (856)
...+....... ...... ........+..... ....+.......+.......... .....+...
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (243)
T d2amya1 77 KLLCRQNIQSHLGEALIQDLINYCLSYIAKIKLPKKRGTFIEFRNGMLNVSPIGRSCSQEERIEFYELDKKENIRQKFVA 156 (243)
T ss_dssp EEEEECCHHHHHCHHHHHHHHHHHHHHHHHCCCSCCCSCSEEEETTEEEECSSCTTCCHHHHHHHHHHHHHHCHHHHHHH
T ss_pred ccceecchhHHHHHHHHHHHHhhhhhhheeccccccccchhhhhhhhhcccccccccchhhhhhhhhhhcchhhhHHHHH
Confidence 54444322110 001111 11111111111111 11111111122222111111100 112344455
Q ss_pred HHHHHhcCCC-eEEEEcCeEEEEEeCCCCHHHHHHHHHHHhhhcCCCcceEEEEeC----CchhHHHHHHccccccCCCC
Q 003025 730 HLESVLANEP-AAVKSGQFIVEVKPQGVSKGVVAEKIFTTMAESGRHADFVLCIGD----DRSDEDMFEIIGNATSSGVL 804 (856)
Q Consensus 730 ~L~~~l~~~~-~~v~~g~~~vEI~p~gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD----~~ND~~Mf~~ag~~~~~~~~ 804 (856)
.+.+.+.... ....++..++||.|+++|||+|+++|+ +++.+++++||| |.||++||+++|.
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~lei~~~~vsKg~al~~l~------~~~~~ev~afGD~~~~g~NDi~Ml~~~g~------- 223 (243)
T d2amya1 157 DLRKEFAGKGLTFSIGGQISFDVFPDGWDKRYCLRHVE------NDGYKTIYFFGDKTMPGGNDHEIFTDPRT------- 223 (243)
T ss_dssp HHHHHTTTSCEEEEEETTTEEEEEETTCSGGGGGGGTT------TSCCSEEEEEECSCC---CCCHHHHCTTE-------
T ss_pred HHHHHhcccceEEEecCCccceeeccccCHHHHHHHHh------CCCcceEEEEcCCCCCCCCcHHHHHccCC-------
Confidence 5555554444 455677899999999999999999884 578899999999 7799999999984
Q ss_pred CCCccEEEEEeCCCccccceEcCChhHHHHHHHHHH
Q 003025 805 SSNASVFACTVGQKPSKAKYYLDDAAEVVTMLEALA 840 (856)
Q Consensus 805 ~~~~~~~av~vG~~~s~A~y~l~~~~eV~~~L~~L~ 840 (856)
.+++ +++++++.++++.|+
T Consensus 224 ------~~~~-----------v~~~~~~~~~~~~l~ 242 (243)
T d2amya1 224 ------MGYS-----------VTAPEDTRRICELLF 242 (243)
T ss_dssp ------EEEE-----------CSSHHHHHHHHHHHC
T ss_pred ------cEEE-----------eCCHHHHHHHHHHHh
Confidence 2333 467888999888875
|
| >d2fuea1 c.108.1.10 (A:13-256) Phosphomannomutase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphomannomutase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.78 E-value=2.3e-19 Score=183.36 Aligned_cols=195 Identities=16% Similarity=0.163 Sum_probs=112.7
Q ss_pred EEEE-EecCCCCCCCCCCCCCCCHHHHHHHHHHHhhCCCeEEEecCCChhhHHHhhcC-CC----CccEEeeCCEEEEeC
Q 003025 592 RAIL-FDYDGTVMPQTSINKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSP-CK----KLGIAAEHGYFMRWS 665 (856)
Q Consensus 592 rlI~-~DlDGTLl~~~~~~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~-~~----~lgliaenG~~I~~~ 665 (856)
|+|+ ||+||||++ ++++++++++++|++| ++.|+ ++++|||........+.. ++ ..++++.+|.++...
T Consensus 1 k~i~lFDlDGTLl~---~~~~is~~~~~~i~~l-~~~g~-~~i~tgrr~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 75 (244)
T d2fuea1 1 RVLCLFDVDGTLTP---ARQKIDPEVAAFLQKL-RSRVQ-IGVVGGSDYCKIAEQLGDGDEVIEKFDYVFAENGTVQYKH 75 (244)
T ss_dssp CEEEEEESBTTTBS---TTSCCCHHHHHHHHHH-TTTSE-EEEECSSCHHHHHHHHSSTTTHHHHCSEEEEGGGTEEEET
T ss_pred CEEEEEccccCccC---CCCcCCHHHHHHHHHH-HhCCC-EEEEecCChhhhhhhhhhhhccccccceeecccceeeccC
Confidence 4555 599999999 8889999999999997 77776 556666666655544433 22 345678888888877
Q ss_pred CCcceEecCCCCcc-cHHHHH-HHHHHHHhhcCC----cceEEecccceEEeeecCCCCCC-----------chhHHHHH
Q 003025 666 ADEEWQNCGQSVDF-GWIQIA-EPVMKLYTESTD----GSYIEIKESALVWHHRDADPGFG-----------SSQAKELL 728 (856)
Q Consensus 666 ~~~~w~~~~~~~~~-~w~~~v-~~i~~~~~~~~~----Gs~ie~k~~~l~~~~~~~dp~~~-----------~~~a~el~ 728 (856)
+...|......... ...... ............ ..+.........++......... .....+..
T Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (244)
T d2fuea1 76 GRLLSKQTIQNHLGEELLQDLINFCLSYMALLRLPKKRGTFIEFRNGMLNISPIGRSCTLEERIEFSELDKKEKIREKFV 155 (244)
T ss_dssp TEECCCCCHHHHHCHHHHHHHHHHHHHHHHTCCCSCCCSCSEEECSSCEEECSSCTTCCHHHHHHHHHHHHHHCHHHHHH
T ss_pred CccceeechhHHHhhhHHHHHHhhhhhhhheecccccccchhhhhhhhhhccccccccchhhhhhhhhhccchhhHHHHH
Confidence 65544332111000 011111 111111111111 11111112222222111111100 01112223
Q ss_pred HHHHHHhcCCC-eEEEEcCeEEEEEeCCCCHHHHHHHHHHHhhhcCCCcceEEEEeCC----chhHHHHHHccc
Q 003025 729 DHLESVLANEP-AAVKSGQFIVEVKPQGVSKGVVAEKIFTTMAESGRHADFVLCIGDD----RSDEDMFEIIGN 797 (856)
Q Consensus 729 ~~L~~~l~~~~-~~v~~g~~~vEI~p~gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD~----~ND~~Mf~~ag~ 797 (856)
..+........ ....++..++||.|+++|||+|+++|++ +++++|++|||+ .||++||+++|.
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~lei~~~~vsKg~al~~L~~------~~~~ev~afGD~~~~G~ND~eml~~a~~ 223 (244)
T d2fuea1 156 EALKTEFAGKGLRFSRGGMISFDVFPEGWDKRYCLDSLDQ------DSFDTIHFFGNETSPGGNDFEIFADPRT 223 (244)
T ss_dssp HHHHHHTTTSCEEEECCSSSCEEEEETTCSTTHHHHHHTT------SCCSEEEEEESCCSTTSTTHHHHHSTTS
T ss_pred HHHHHHhhccceeEeeccCccceecchhccHHHHHHHHhc------CChhhEEEEcCCCCCCCCcHHHHHcCCC
Confidence 33333333333 4455688999999999999999999874 478999999996 599999999984
|
| >d2iw1a1 c.87.1.8 (A:2-371) Lipopolysaccharide core biosynthesis protein RfaG {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Lipopolysaccharide core biosynthesis protein RfaG species: Escherichia coli [TaxId: 562]
Probab=99.76 E-value=6e-19 Score=190.94 Aligned_cols=199 Identities=16% Similarity=0.174 Sum_probs=147.5
Q ss_pred EEEeecccCchHHHHHhcCchHHHHHHHHHHHc---CCCeEEEeccCccccCCHHHHHHHHHHHHHhCCCCcCceEEEEE
Q 003025 301 IKIMPVGIHMGQIESVLRLADKDWRVQELKQQF---EGKTVLLGVDDMDIFKGVDLKLLAMEHLLKQHPKWQGRAVLVQI 377 (856)
Q Consensus 301 i~i~p~GId~~~~~~~~~~~~~~~~~~~l~~~~---~~k~iil~VdRld~~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi 377 (856)
+.++|+|||+..+..... +. ....+++.+ .+++++++++|+.+.||+..+++|++++.+++|+.. ++.+
T Consensus 161 i~vi~~gv~~~~~~~~~~-~~---~~~~~r~~~~~~~~~~~i~~~gr~~~~Kg~~~li~a~~~l~~~~~~~~----~~ii 232 (370)
T d2iw1a1 161 FQILPPGIYPDRKYSEQI-PN---SREIYRQKNGIKEQQNLLLQVGSDFGRKGVDRSIEALASLPESLRHNT----LLFV 232 (370)
T ss_dssp EEECCCCCCGGGSGGGSC-TT---HHHHHHHHTTCCTTCEEEEEECSCTTTTTHHHHHHHHHTSCHHHHHTE----EEEE
T ss_pred EEEEEeecccccccccCc-hh---hhhhhhhccCCCccceEEEEEeccccccchhhhcccccccccccccce----eeec
Confidence 567899999887643322 22 223344544 478999999999999999999999999988877643 5555
Q ss_pred ecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCcccEEEEcCCCCHHHHHHHHHhcceeeeccccccCCCcccceeeeec
Q 003025 378 ANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDKPVTLSERAAYYTIAECVVVTAVRDGMNLTPYEYIVCRQ 457 (856)
Q Consensus 378 ~~p~r~~~~~~~~l~~~~~~lv~~IN~~~~~~~~~pvv~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~a~~~ 457 (856)
+... .+ + ++++++++.+.. ..+.+.++ .+++..+|+.||++|+||..|||+++++|||+|+.
T Consensus 233 ~g~~---~~--~----~~~~~~~~~~~~-------~~v~~~g~--~~~~~~~~~~adv~v~ps~~E~~~~~~~EAma~G~ 294 (370)
T d2iw1a1 233 VGQD---KP--R----KFEALAEKLGVR-------SNVHFFSG--RNDVSELMAAADLLLHPAYQEAAGIVLLEAITAGL 294 (370)
T ss_dssp ESSS---CC--H----HHHHHHHHHTCG-------GGEEEESC--CSCHHHHHHHCSEEEECCSCCSSCHHHHHHHHHTC
T ss_pred cccc---cc--c----cccccccccccc-------cccccccc--ccccccccccccccccccccccccceeeecccCCe
Confidence 5321 11 2 233444444332 22334444 35799999999999999999999999999999954
Q ss_pred CCCCCCCCCCCCCCCCceEEecCCcccccccC---Cc-eeeCCCCHHHHHHHHHHHHcCCHHHHHHHHHHHhhhhhcCCH
Q 003025 458 GVSGSESSSESSAPKKSMLVVSEFIGCSPSLS---GA-IRVNPWNIEATAEAMHEAIQMNEAEKQLRHEKHYRYVSTHDV 533 (856)
Q Consensus 458 ~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~a-l~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~ 533 (856)
|+|+|+.+|..+.+. .| ++++|.|++++|++|.++|+. ++.++...++.++++++++.
T Consensus 295 -----------------PvI~s~~~g~~e~i~~~~~G~l~~~~~d~~~la~~i~~ll~d-~~~~~~~~~~ar~~~~~~~~ 356 (370)
T d2iw1a1 295 -----------------PVLTTAVCGYAHYIADANCGTVIAEPFSQEQLNEVLRKALTQ-SPLRMAWAENARHYADTQDL 356 (370)
T ss_dssp -----------------CEEEETTSTTTHHHHHHTCEEEECSSCCHHHHHHHHHHHHHC-HHHHHHHHHHHHHHHHHSCC
T ss_pred -----------------eEEEeCCCChHHHhcCCCceEEEcCCCCHHHHHHHHHHHHcC-HHHHHHHHHHHHHHHHHhCh
Confidence 999999999998882 35 455899999999999999984 55566667778899998988
Q ss_pred HHHHHHHHHH
Q 003025 534 AYWARSFFQD 543 (856)
Q Consensus 534 ~~W~~~~l~~ 543 (856)
..|.+...+-
T Consensus 357 ~~~~~~~~~i 366 (370)
T d2iw1a1 357 YSLPEKAADI 366 (370)
T ss_dssp SCHHHHHHHH
T ss_pred hHHHHHHHHH
Confidence 8888755443
|
| >d2f9fa1 c.87.1.8 (A:2-167) First mannosyl transferase WbaZ {Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: First mannosyl transferase WbaZ species: Archaeoglobus fulgidus [TaxId: 2234]
Probab=99.61 E-value=1e-15 Score=148.75 Aligned_cols=142 Identities=19% Similarity=0.228 Sum_probs=111.4
Q ss_pred eEEEeccCccccCCHHHHHHHHHHHHHhCCCCcCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCcccEEE
Q 003025 337 TVLLGVDDMDIFKGVDLKLLAMEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVF 416 (856)
Q Consensus 337 ~iil~VdRld~~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~~~~lv~~IN~~~~~~~~~pvv~ 416 (856)
..+|+|||+++.||+...++|++++ |+.+ |+.+|..+ .++..+.+.+++.+. . ...|++
T Consensus 13 ~~~l~iGrl~~~K~~~~~i~a~~~l----~~~~----l~ivg~~~--~~~~~~~~~~~~~~~----~-------~~~v~~ 71 (166)
T d2f9fa1 13 DFWLSVNRIYPEKRIELQLEVFKKL----QDEK----LYIVGWFS--KGDHAERYARKIMKI----A-------PDNVKF 71 (166)
T ss_dssp SCEEEECCSSGGGTHHHHHHHHHHC----TTSC----EEEEBCCC--TTSTHHHHHHHHHHH----S-------CTTEEE
T ss_pred CEEEEEecCccccCHHHHHHHHHHh----cCCe----EEEEEecc--cccchhhhhhhhccc----c-------cCcEEE
Confidence 5688999999999999999999765 5544 66676543 334445555554432 1 122554
Q ss_pred EcCCCCHHHHHHHHHhcceeeeccccccCCCcccceeeeecCCCCCCCCCCCCCCCCceEEecCCcccccccC---Ccee
Q 003025 417 IDKPVTLSERAAYYTIAECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIGCSPSLS---GAIR 493 (856)
Q Consensus 417 ~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~al~ 493 (856)
.+.++.+++..+|+.||+++.||..||+|++.+|||+|+. |+|+|..+|+.+.+. .|+.
T Consensus 72 -~g~~~~~~~~~~~~~ad~~i~ps~~e~~~~~~~Ea~~~g~-----------------pvi~s~~~~~~e~i~~~~~g~~ 133 (166)
T d2f9fa1 72 -LGSVSEEELIDLYSRCKGLLCTAKDEDFGLTPIEAMASGK-----------------PVIAVNEGGFKETVINEKTGYL 133 (166)
T ss_dssp -EESCCHHHHHHHHHHCSEEEECCSSCCSCHHHHHHHHTTC-----------------CEEEESSHHHHHHCCBTTTEEE
T ss_pred -eecccccccccccccccccccccccccccccccccccccc-----------------cceeecCCcceeeecCCccccc
Confidence 5789999999999999999999999999999999999955 999999999998873 3676
Q ss_pred eCCCCHHHHHHHHHHHHcCCHHHHH
Q 003025 494 VNPWNIEATAEAMHEAIQMNEAEKQ 518 (856)
Q Consensus 494 VnP~d~~~~A~ai~~aL~m~~~er~ 518 (856)
+++ |+++++++|.++++.++..++
T Consensus 134 ~~~-d~~~~~~~i~~l~~~~~~~~~ 157 (166)
T d2f9fa1 134 VNA-DVNEIIDAMKKVSKNPDKFKK 157 (166)
T ss_dssp ECS-CHHHHHHHHHHHHHCTTTTHH
T ss_pred CCC-CHHHHHHHHHHHHhCHHHHHH
Confidence 655 999999999999998754433
|
| >d1rkua_ c.108.1.11 (A:) Homoserine kinase ThrH {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Homoserine kinase ThrH domain: Homoserine kinase ThrH species: Pseudomonas aeruginosa [TaxId: 287]
Probab=99.38 E-value=2.9e-14 Score=141.52 Aligned_cols=73 Identities=7% Similarity=-0.009 Sum_probs=59.1
Q ss_pred eCCCCHHHHHHHHHHHhhhcCCCcceEEEEeCCchhHHHHHHccccccCCCCCCCccEEEEEeCCC----ccccceEc-C
Q 003025 753 PQGVSKGVVAEKIFTTMAESGRHADFVLCIGDDRSDEDMFEIIGNATSSGVLSSNASVFACTVGQK----PSKAKYYL-D 827 (856)
Q Consensus 753 p~gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~----~s~A~y~l-~ 827 (856)
+....|+...+.+++++ ++++++|+||||+.||++||+.||. +|+++.. +..|+|.+ +
T Consensus 125 ~~~~~~~~~~~~~~~~~---~i~~~eviaiGDg~NDi~Ml~~Ag~--------------gIAmna~~~v~~~~~~~~~~~ 187 (206)
T d1rkua_ 125 GYQLRQKDPKRQSVIAF---KSLYYRVIAAGDSYNDTTMLSEAHA--------------GILFHAPENVIREFPQFPAVH 187 (206)
T ss_dssp EEECCSSSHHHHHHHHH---HHTTCEEEEEECSSTTHHHHHHSSE--------------EEEESCCHHHHHHCTTSCEEC
T ss_pred cccccchhhHHHHHHHh---cccccceEEecCCccCHHHHHhCCc--------------cEEECCCHHHHHhCCCceeec
Confidence 34456778888888888 8999999999999999999999995 6777653 46678864 6
Q ss_pred ChhHHHHHHHHHHHh
Q 003025 828 DAAEVVTMLEALAEA 842 (856)
Q Consensus 828 ~~~eV~~~L~~L~~~ 842 (856)
+.+++.+.|.+..+.
T Consensus 188 ~~~d~~~~~~~~~~~ 202 (206)
T d1rkua_ 188 TYEDLKREFLKASSR 202 (206)
T ss_dssp SHHHHHHHHHHHCSS
T ss_pred CHHHHHHHHHHHhhC
Confidence 899999888876544
|
| >d1k1ea_ c.108.1.5 (A:) Probable phosphatase YrbI {Haemophilus influenzae, HI1679 [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Probable phosphatase YrbI domain: Probable phosphatase YrbI species: Haemophilus influenzae, HI1679 [TaxId: 727]
Probab=99.03 E-value=9.1e-10 Score=107.14 Aligned_cols=73 Identities=19% Similarity=0.262 Sum_probs=61.2
Q ss_pred CCHHHHHHHHHHHhhhcCCCcceEEEEeCCchhHHHHHHccccccCCCCCCCccEEEEEeCCC----ccccceEcCC---
Q 003025 756 VSKGVVAEKIFTTMAESGRHADFVLCIGDDRSDEDMFEIIGNATSSGVLSSNASVFACTVGQK----PSKAKYYLDD--- 828 (856)
Q Consensus 756 vsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~----~s~A~y~l~~--- 828 (856)
.+|..+++.+++++ ++++++|++|||+.||++||+.+|. +++++++ +..|+|++..
T Consensus 79 ~~K~~~l~~~~~~~---~i~~~~v~~vGDd~nDl~~l~~~g~--------------siap~nA~~~vk~~A~~Vt~~~GG 141 (177)
T d1k1ea_ 79 LEKETACFDLMKQA---GVTAEQTAYIGDDSVDLPAFAACGT--------------SFAVADAPIYVKNAVDHVLSTHGG 141 (177)
T ss_dssp SCHHHHHHHHHHHH---TCCGGGEEEEECSGGGHHHHHHSSE--------------EEECTTSCHHHHTTSSEECSSCTT
T ss_pred ccHHHHHHHHHHHh---cCCcceeEEecCCccHHHHHhhCCe--------------EEEcCCccHHHHHhCCEEeCCCCC
Confidence 45999999999999 9999999999999999999999984 6888875 5889999964
Q ss_pred hhHHHHHHHHHHHhcCC
Q 003025 829 AAEVVTMLEALAEASAP 845 (856)
Q Consensus 829 ~~eV~~~L~~L~~~~~~ 845 (856)
...|.++.+.+......
T Consensus 142 ~GavrE~~e~il~~~~~ 158 (177)
T d1k1ea_ 142 KGAFREMSDMILQAQGK 158 (177)
T ss_dssp TTHHHHHHHHHHHHTTC
T ss_pred CchHHHHHHHHHHHCCC
Confidence 34488888887766544
|
| >d1j97a_ c.108.1.4 (A:) Phosphoserine phosphatase {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=99.02 E-value=1.7e-10 Score=113.94 Aligned_cols=70 Identities=24% Similarity=0.346 Sum_probs=56.4
Q ss_pred EEeCCCCHHHHHHHHHHHhhhcCCCcceEEEEeCCchhHHHHHHccccccCCCCCCCccEEEEEeCCC--ccccceEcC-
Q 003025 751 VKPQGVSKGVVAEKIFTTMAESGRHADFVLCIGDDRSDEDMFEIIGNATSSGVLSSNASVFACTVGQK--PSKAKYYLD- 827 (856)
Q Consensus 751 I~p~gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~--~s~A~y~l~- 827 (856)
....+..|+.++..+++++ +++++++++|||+.||++||+.||.+ +++ .+.. +..|+|+++
T Consensus 136 ~~~~~~~~~~~~~~~~~~~---~~~~~~~i~iGDs~nDi~m~~~ag~~------------va~-na~~~lk~~Ad~vi~~ 199 (210)
T d1j97a_ 136 EVLKENAKGEILEKIAKIE---GINLEDTVAVGDGANDISMFKKAGLK------------IAF-CAKPILKEKADICIEK 199 (210)
T ss_dssp SSCSTTHHHHHHHHHHHHH---TCCGGGEEEEESSGGGHHHHHHCSEE------------EEE-SCCHHHHTTCSEEECS
T ss_pred cccccccccchhhhHHHHh---cccccceEEecCCcChHHHHHHCCCC------------EEE-CCCHHHHHhCCEEEcC
Confidence 3456778999999999999 99999999999999999999999963 333 3332 578999997
Q ss_pred -ChhHHHHHH
Q 003025 828 -DAAEVVTML 836 (856)
Q Consensus 828 -~~~eV~~~L 836 (856)
|.++|+++|
T Consensus 200 ~d~~~vl~~l 209 (210)
T d1j97a_ 200 RDLREILKYI 209 (210)
T ss_dssp SCGGGGGGGC
T ss_pred CCHHHHHHHh
Confidence 557887765
|
| >d2c4na1 c.108.1.14 (A:1-250) NagD {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: NagD species: Escherichia coli [TaxId: 562]
Probab=98.75 E-value=2.9e-09 Score=109.35 Aligned_cols=53 Identities=17% Similarity=0.291 Sum_probs=43.2
Q ss_pred CcEEEEEecCCCCCCCCCCCCCCCHHHHHHHHHHHhhCCCeEEEec---CCChhhHHHhhc
Q 003025 590 KSRAILFDYDGTVMPQTSINKAPSQAVISIINTLCNDARNTVFVVS---GRGRDCLGKWFS 647 (856)
Q Consensus 590 ~~rlI~~DlDGTLl~~~~~~~~~s~~~~~aL~~L~~d~g~~V~I~T---GR~~~~l~~~~~ 647 (856)
++|+|+||+||||++ ....+ +.+.++|+.| ++.|.+|+++| +|++..+.+.+.
T Consensus 2 ~ik~VifDlDGTL~~---~~~~i-~~a~e~i~~l-~~~g~~~~~~TN~~~~~~~~~~~~l~ 57 (250)
T d2c4na1 2 TIKNVICDIDGVLMH---DNVAV-PGAAEFLHGI-MDKGLPLVLLTNYPSQTGQDLANRFA 57 (250)
T ss_dssp CCCEEEEECBTTTEE---TTEEC-TTHHHHHHHH-HHTTCCEEEEESCCSCCHHHHHHHHH
T ss_pred CCCEEEEECCCeeEE---CCCcC-ccHHHHHHHH-HHCCCcEEEEeCCCCCCHHHHHHHHh
Confidence 589999999999998 55555 4678899997 88899999987 677887777664
|
| >d1vjra_ c.108.1.14 (A:) Hypothetical protein TM1742 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Hypothetical protein TM1742 species: Thermotoga maritima [TaxId: 2336]
Probab=98.72 E-value=2.2e-09 Score=110.84 Aligned_cols=66 Identities=15% Similarity=0.274 Sum_probs=52.2
Q ss_pred HHHHHHHHHHHhhhcCCCcceEEEEeCC-chhHHHHHHccccccCCCCCCCccEEEEEeCCC--------ccccceEcCC
Q 003025 758 KGVVAEKIFTTMAESGRHADFVLCIGDD-RSDEDMFEIIGNATSSGVLSSNASVFACTVGQK--------PSKAKYYLDD 828 (856)
Q Consensus 758 KG~al~~Ll~~l~~~gi~~d~vlaiGD~-~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~--------~s~A~y~l~~ 828 (856)
+....+.+++++ |++++++++|||+ .||+.|.+.+|.. .+.|..|.. ...++|++++
T Consensus 187 ~p~~~~~a~~~l---~~~~~~~lmVGD~~~~DI~ga~~aG~~-----------si~V~~G~~~~~~~~~~~~~PD~ii~~ 252 (261)
T d1vjra_ 187 NPLVVDVISEKF---GVPKERMAMVGDRLYTDVKLGKNAGIV-----------SILVLTGETTPEDLERAETKPDFVFKN 252 (261)
T ss_dssp STHHHHHHHHHH---TCCGGGEEEEESCHHHHHHHHHHHTCE-----------EEEESSSSCCHHHHHHCSSCCSEEESS
T ss_pred cHHHHHHHHhhh---ccCchhcceecCChhHHHHHHHHCCCc-----------EEEECCCCCCHHHHhhcCCCCCEEECC
Confidence 567778899999 9999999999999 5799999999973 133444532 2346899999
Q ss_pred hhHHHHHHH
Q 003025 829 AAEVVTMLE 837 (856)
Q Consensus 829 ~~eV~~~L~ 837 (856)
..|+.++|+
T Consensus 253 l~eL~~~l~ 261 (261)
T d1vjra_ 253 LGELAKAVQ 261 (261)
T ss_dssp HHHHHHHHC
T ss_pred HHHHHHHhC
Confidence 999998874
|
| >d1yv9a1 c.108.1.14 (A:4-256) Putative hydrolase EF1188 {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Putative hydrolase EF1188 species: Enterococcus faecalis [TaxId: 1351]
Probab=98.72 E-value=6.3e-09 Score=106.83 Aligned_cols=51 Identities=16% Similarity=0.238 Sum_probs=39.8
Q ss_pred cEEEEEecCCCCCCCCCCCCCCCHHHHHHHHHHHhhCCCeEEEecCCC---hhhHHHhh
Q 003025 591 SRAILFDYDGTVMPQTSINKAPSQAVISIINTLCNDARNTVFVVSGRG---RDCLGKWF 646 (856)
Q Consensus 591 ~rlI~~DlDGTLl~~~~~~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~---~~~l~~~~ 646 (856)
.|+|+||+||||++ ....+ +.+.++|++| ++.|.+++++|+++ ...+.+.+
T Consensus 2 yk~v~fDlDGTL~~---~~~~i-~~a~~~i~~l-~~~g~~~~~~Tn~s~~~~~~~~~~L 55 (253)
T d1yv9a1 2 YQGYLIDLDGTIYL---GKEPI-PAGKRFVERL-QEKDLPFLFVTNNTTKSPETVAQRL 55 (253)
T ss_dssp CCEEEECCBTTTEE---TTEEC-HHHHHHHHHH-HHTTCCEEEEECCCSSCHHHHHHHH
T ss_pred CCEEEEcCCCccEe---CCCcC-ccHHHHHHHH-HHCCCCEEEEeCCCCCCHHHHHHHH
Confidence 58999999999998 55555 7889999996 88899999997544 55544433
|
| >d2feaa1 c.108.1.20 (A:2-227) 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: MtnX-like domain: 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX species: Bacillus subtilis [TaxId: 1423]
Probab=98.66 E-value=6.5e-09 Score=104.28 Aligned_cols=69 Identities=13% Similarity=0.203 Sum_probs=52.8
Q ss_pred CHHHHHHHHHHHhhhcCCCcceEEEEeCCchhHHHHHHccccccCCCCCCCccEEEEEeCCC-----ccccce-EcCChh
Q 003025 757 SKGVVAEKIFTTMAESGRHADFVLCIGDDRSDEDMFEIIGNATSSGVLSSNASVFACTVGQK-----PSKAKY-YLDDAA 830 (856)
Q Consensus 757 sKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~-----~s~A~y-~l~~~~ 830 (856)
.|+..+..+++.+ +.+++++++|||+.||++|++.|+. ++++|.. .....+ ..+|..
T Consensus 145 ~k~~~~~~~~~~~---~~~~~~~i~iGDs~~Dl~~a~~A~~--------------~~a~~~~~~~~~~~~~~~~~~~d~~ 207 (226)
T d2feaa1 145 QCGCCKPSVIHEL---SEPNQYIIMIGDSVTDVEAAKLSDL--------------CFARDYLLNECREQNLNHLPYQDFY 207 (226)
T ss_dssp CCSSCHHHHHHHH---CCTTCEEEEEECCGGGHHHHHTCSE--------------EEECHHHHHHHHHTTCCEECCSSHH
T ss_pred CCHHHHHHHHHHh---cCCCceEEEEeCchhhHHHHHHCCE--------------EEEecchHHHHHHcCCCeeecCCHH
Confidence 4667777888888 9999999999999999999999985 4455542 122223 357889
Q ss_pred HHHHHHHHHHHh
Q 003025 831 EVVTMLEALAEA 842 (856)
Q Consensus 831 eV~~~L~~L~~~ 842 (856)
++...|+.+.+.
T Consensus 208 ~i~~~l~~~~~~ 219 (226)
T d2feaa1 208 EIRKEIENVKEV 219 (226)
T ss_dssp HHHHHHHTSHHH
T ss_pred HHHHHHHHHHHH
Confidence 999999988764
|
| >d2ah5a1 c.108.1.6 (A:1-210) predicted phosphatase SP0104 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: predicted phosphatase SP0104 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=98.34 E-value=1.3e-06 Score=85.74 Aligned_cols=70 Identities=20% Similarity=0.181 Sum_probs=58.6
Q ss_pred CCCCHHHHHHHHHHHhhhcCCCcceEEEEeCCchhHHHHHHccccccCCCCCCCccEEEEEeCCC------ccccceEcC
Q 003025 754 QGVSKGVVAEKIFTTMAESGRHADFVLCIGDDRSDEDMFEIIGNATSSGVLSSNASVFACTVGQK------PSKAKYYLD 827 (856)
Q Consensus 754 ~gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~------~s~A~y~l~ 827 (856)
.+-.|...++.+++++ |++++++++|||+.+|+.+.+.+|.. ++.|+.|.. ...|+|+++
T Consensus 135 ~~~~~p~~~~~~~~~~---~~~~~~~v~VGDs~~Di~aa~~aGi~-----------~i~v~~g~~~~~~l~~~~pd~vi~ 200 (210)
T d2ah5a1 135 EAPHKADVIHQALQTH---QLAPEQAIIIGDTKFDMLGARETGIQ-----------KLAITWGFGEQADLLNYQPDYIAH 200 (210)
T ss_dssp SCCSHHHHHHHHHHHT---TCCGGGEEEEESSHHHHHHHHHHTCE-----------EEEESSSSSCHHHHHTTCCSEEES
T ss_pred cccccccccchhhhhh---hcccccceeecCCHHHHHHHHHcCCe-----------EEEEcCCCCCHHHHHhCCCCEEEC
Confidence 4566899999999999 99999999999999999999999973 356666642 356889999
Q ss_pred ChhHHHHHHH
Q 003025 828 DAAEVVTMLE 837 (856)
Q Consensus 828 ~~~eV~~~L~ 837 (856)
+..|++++||
T Consensus 201 ~l~el~~~le 210 (210)
T d2ah5a1 201 KPLEVLAYFQ 210 (210)
T ss_dssp STTHHHHHTC
T ss_pred CHHHHHHHhC
Confidence 9999888764
|
| >d1nnla_ c.108.1.4 (A:) Phosphoserine phosphatase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.33 E-value=7e-07 Score=89.14 Aligned_cols=59 Identities=24% Similarity=0.341 Sum_probs=46.1
Q ss_pred CCCHHHHHHHHHHHhhhcCCCcceEEEEeCCchhHHHHHHccccccCCCCCCCccEEEEEeCCCc------cccceEcCC
Q 003025 755 GVSKGVVAEKIFTTMAESGRHADFVLCIGDDRSDEDMFEIIGNATSSGVLSSNASVFACTVGQKP------SKAKYYLDD 828 (856)
Q Consensus 755 gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~~------s~A~y~l~~ 828 (856)
+..|+..++.+.+.. ++++++++|||.||++|++.+|. .|++|..+ ..|.|++.+
T Consensus 151 ~~~K~~~v~~~~~~~-----~~~~~~~vGDs~~Di~~~~~ag~--------------~va~~~~~~~~~~~~~ad~~i~~ 211 (217)
T d1nnla_ 151 SGGKGKVIKLLKEKF-----HFKKIIMIGDGATDMEACPPADA--------------FIGFGGNVIRQQVKDNAKWYITD 211 (217)
T ss_dssp TTHHHHHHHHHHHHH-----CCSCEEEEESSHHHHTTTTTSSE--------------EEEECSSCCCHHHHHHCSEEESC
T ss_pred cchHHHHHHHHHhcc-----CccccEEEEeCHhhHHHHHhCCc--------------eEEECCCHHHHHHHHhCCCEeCC
Confidence 344999999887754 57899999999999999999985 46666432 458898888
Q ss_pred hhHH
Q 003025 829 AAEV 832 (856)
Q Consensus 829 ~~eV 832 (856)
..++
T Consensus 212 f~el 215 (217)
T d1nnla_ 212 FVEL 215 (217)
T ss_dssp GGGG
T ss_pred HHHh
Confidence 7654
|
| >d2hcfa1 c.108.1.6 (A:2-229) Hypothetical protein CT1708 {Chlorobium tepidum [TaxId: 1097]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein CT1708 species: Chlorobium tepidum [TaxId: 1097]
Probab=98.28 E-value=7.9e-07 Score=88.77 Aligned_cols=57 Identities=18% Similarity=0.202 Sum_probs=48.2
Q ss_pred CCCcceEEEEeCCchhHHHHHHccccccCCCCCCCccEEEEEeCCC------ccccceEcCChhHHHHHHHHHH
Q 003025 773 GRHADFVLCIGDDRSDEDMFEIIGNATSSGVLSSNASVFACTVGQK------PSKAKYYLDDAAEVVTMLEALA 840 (856)
Q Consensus 773 gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~------~s~A~y~l~~~~eV~~~L~~L~ 840 (856)
+++++++++|||+.+|+.+-+.+|.. +++|+.|.. +..|+|++++..++.++|+.|.
T Consensus 165 ~~~p~~~l~VGD~~~Di~aA~~aG~~-----------~i~v~~g~~~~~~l~~~~ad~vi~~~~el~~~l~~l~ 227 (228)
T d2hcfa1 165 NYSPSQIVIIGDTEHDIRCARELDAR-----------SIAVATGNFTMEELARHKPGTLFKNFAETDEVLASIL 227 (228)
T ss_dssp CCCGGGEEEEESSHHHHHHHHTTTCE-----------EEEECCSSSCHHHHHTTCCSEEESCSCCHHHHHHHHH
T ss_pred CCChhHheeecCChHHHHHHHHcCCE-----------EEEEcCCCCCHHHHhhCCCCEEECCHHHHHHHHHHHh
Confidence 68899999999999999999999973 356666753 4578999999999999999875
|
| >d2gmwa1 c.108.1.19 (A:24-205) D,D-heptose 1,7-bisphosphate phosphatase GmhB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: D,D-heptose 1,7-bisphosphate phosphatase GmhB species: Escherichia coli [TaxId: 562]
Probab=98.26 E-value=3e-07 Score=89.34 Aligned_cols=68 Identities=10% Similarity=0.080 Sum_probs=54.3
Q ss_pred HHHHHHHHHHHhhhcCCCcceEEEEeCCchhHHHHHHccccccCCCCCCCccEEEEEeCCC-----ccccceEcCChhHH
Q 003025 758 KGVVAEKIFTTMAESGRHADFVLCIGDDRSDEDMFEIIGNATSSGVLSSNASVFACTVGQK-----PSKAKYYLDDAAEV 832 (856)
Q Consensus 758 KG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~-----~s~A~y~l~~~~eV 832 (856)
+...+..+++++ +++++++++|||+.+|+.+-+.+|.. .++.|..|.. ...|+|++++..|+
T Consensus 110 ~p~m~~~~~~~~---~i~~~~s~mVGDs~~Di~aA~~Ag~~----------~~~lv~~g~~~~~~~~~~ad~v~~~l~dl 176 (182)
T d2gmwa1 110 HPGMLLSARDYL---HIDMAASYMVGDKLEDMQAAVAANVG----------TKVLVRTGKPITPEAENAADWVLNSLADL 176 (182)
T ss_dssp SCHHHHHHHHHH---TBCGGGCEEEESSHHHHHHHHHTTCS----------EEEEESSSSCCCHHHHHHCSEEESCGGGH
T ss_pred ccccccchhhhc---ccccccccccCCCHHHHHHHHHhCCC----------cEEEECCCCCCCcccccCCCEEECCHHHH
Confidence 344567778888 99999999999999999999999863 2356666653 25699999999999
Q ss_pred HHHHHH
Q 003025 833 VTMLEA 838 (856)
Q Consensus 833 ~~~L~~ 838 (856)
.++|++
T Consensus 177 ~~~ikk 182 (182)
T d2gmwa1 177 PQAIKK 182 (182)
T ss_dssp HHHHHC
T ss_pred HHHhcC
Confidence 998863
|
| >d1wvia_ c.108.1.14 (A:) Putative phosphatase SMU.1415c {Streptococcus mutans [TaxId: 1309]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Putative phosphatase SMU.1415c species: Streptococcus mutans [TaxId: 1309]
Probab=98.26 E-value=2.6e-06 Score=86.82 Aligned_cols=51 Identities=18% Similarity=0.275 Sum_probs=40.3
Q ss_pred cEEEEEecCCCCCCCCCCCCCCCHHHHHHHHHHHhhCCCeEEEecC---CChhhHHHhh
Q 003025 591 SRAILFDYDGTVMPQTSINKAPSQAVISIINTLCNDARNTVFVVSG---RGRDCLGKWF 646 (856)
Q Consensus 591 ~rlI~~DlDGTLl~~~~~~~~~s~~~~~aL~~L~~d~g~~V~I~TG---R~~~~l~~~~ 646 (856)
.|.|+||+||||++ ... +-+.+.++|++| ++.|..++++|+ |+...+.+.+
T Consensus 2 yk~vlFDlDGTL~~---~~~-~i~~a~e~l~~l-~~~g~~~~~~TN~s~~~~~~~~~~l 55 (253)
T d1wvia_ 2 YKGYLIDLDGTIYK---GKD-RIPAGEDFVKRL-QERQLPYILVTNNTTRTPEMVQEML 55 (253)
T ss_dssp CCEEEEECBTTTEE---TTE-ECHHHHHHHHHH-HHHTCCEEEEECCCSSCHHHHHHHH
T ss_pred cCEEEEcCcCceEE---CCC-cCccHHHHHHHH-HHCCCCEEEEeCCCCCCHHHHHHHH
Confidence 68999999999997 444 448889999997 788999999985 5556666655
|
| >d2hsza1 c.108.1.6 (A:1-224) Phosphoglycolate phosphatase Gph {Haemophilus somnus [TaxId: 731]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphoglycolate phosphatase Gph species: Haemophilus somnus [TaxId: 731]
Probab=98.25 E-value=4.6e-07 Score=89.72 Aligned_cols=66 Identities=23% Similarity=0.291 Sum_probs=52.2
Q ss_pred HHHHHHHHHHHhhhcCCCcceEEEEeCCchhHHHHHHccccccCCCCCCCccEEEEEeCCC------ccccceEcCChhH
Q 003025 758 KGVVAEKIFTTMAESGRHADFVLCIGDDRSDEDMFEIIGNATSSGVLSSNASVFACTVGQK------PSKAKYYLDDAAE 831 (856)
Q Consensus 758 KG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~------~s~A~y~l~~~~e 831 (856)
|......+++++ +++++++++|||+.+|+.+.+.+|.. ++.|+.|.. ...|.|++++..+
T Consensus 153 ~p~~~~~~~~~~---~~~~~~~~~igD~~~Di~~A~~aG~~-----------~i~v~~g~~~~~~l~~~~~d~~v~~l~d 218 (224)
T d2hsza1 153 HPAPFYYLCGKF---GLYPKQILFVGDSQNDIFAAHSAGCA-----------VVGLTYGYNYNIPIAQSKPDWIFDDFAD 218 (224)
T ss_dssp SSHHHHHHHHHH---TCCGGGEEEEESSHHHHHHHHHHTCE-----------EEEESSSCSTTCCGGGGCCSEEESSGGG
T ss_pred cchhhHHHHHHh---hhhhhccchhcCcHHHHHHHHHcCCe-----------EEEEeCCCCCcchhhhcCCCEEECCHHH
Confidence 556777788888 99999999999999999999999963 345555532 3467899999998
Q ss_pred HHHHHH
Q 003025 832 VVTMLE 837 (856)
Q Consensus 832 V~~~L~ 837 (856)
++++||
T Consensus 219 L~~iie 224 (224)
T d2hsza1 219 ILKITQ 224 (224)
T ss_dssp GGGGTC
T ss_pred HHHhhC
Confidence 887653
|
| >d1u7pa_ c.108.1.17 (A:) Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Magnesium-dependent phosphatase-1, Mdp1 domain: Magnesium-dependent phosphatase-1, Mdp1 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=98.07 E-value=1.8e-05 Score=74.88 Aligned_cols=63 Identities=16% Similarity=0.168 Sum_probs=47.3
Q ss_pred HHHHHHHHHHHhhhcCCCcceEEEEeCCchhHHHHHHccccccCCCCCCCccEEEEEeCCCccccceEcCChhHHHHHHH
Q 003025 758 KGVVAEKIFTTMAESGRHADFVLCIGDDRSDEDMFEIIGNATSSGVLSSNASVFACTVGQKPSKAKYYLDDAAEVVTMLE 837 (856)
Q Consensus 758 KG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~~s~A~y~l~~~~eV~~~L~ 837 (856)
|...+..+++.+ |++++++++|||+..|+..-+.+|.. +|.|... . +.+++.+-|+
T Consensus 100 ~~~~~~~~~~~~---~~~~~~~l~igD~~~di~aA~~aG~~-------------~i~v~~G-------~-~~~~~~~~l~ 155 (164)
T d1u7pa_ 100 KVTHFERLHHKT---GVPFSQMVFFDDENRNIIDVGRLGVT-------------CIHIRDG-------M-SLQTLTQGLE 155 (164)
T ss_dssp HHHHHHHHHHHH---CCCGGGEEEEESCHHHHHHHHTTTCE-------------EEECSSC-------C-CHHHHHHHHH
T ss_pred ChHHHHHHHHHh---CCChHHEEEEcCCHHHHHHHHHcCCE-------------EEEECCC-------C-ChHHHHHHHH
Confidence 666788888998 99999999999999999999999863 4554221 1 3555666677
Q ss_pred HHHHhcC
Q 003025 838 ALAEASA 844 (856)
Q Consensus 838 ~L~~~~~ 844 (856)
..++..+
T Consensus 156 ~f~~~~a 162 (164)
T d1u7pa_ 156 TFAKAQA 162 (164)
T ss_dssp HHHHHTT
T ss_pred HHHHhhc
Confidence 7665543
|
| >d2o2xa1 c.108.1.19 (A:8-216) Hypothetical protein Mll2559 {Mesorhizobium loti [TaxId: 381]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: Hypothetical protein Mll2559 species: Mesorhizobium loti [TaxId: 381]
Probab=98.06 E-value=5.9e-06 Score=81.79 Aligned_cols=70 Identities=17% Similarity=0.120 Sum_probs=49.4
Q ss_pred HHHHHHHHHHHhhhcCCCcceEEEEeCCchhHHHHHHccccccCCCCCCCccEEEEEeCCCccccce---EcCChhHHHH
Q 003025 758 KGVVAEKIFTTMAESGRHADFVLCIGDDRSDEDMFEIIGNATSSGVLSSNASVFACTVGQKPSKAKY---YLDDAAEVVT 834 (856)
Q Consensus 758 KG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~~s~A~y---~l~~~~eV~~ 834 (856)
+...+..+++.+ +++++++++|||+.+|+.+-+.+|.. ...|..|.......+ .+.+..++.+
T Consensus 131 ~p~ml~~a~~~~---~i~~~~~~~VGD~~~Di~aA~~AGi~-----------~i~v~~g~~~~~~~~~~~~~~~~~e~~d 196 (209)
T d2o2xa1 131 NPGMLVEAGKRL---ALDLQRSLIVGDKLADMQAGKRAGLA-----------QGWLVDGEAAVQPGFAIRPLRDSSELGD 196 (209)
T ss_dssp SCHHHHHHHHHH---TCCGGGCEEEESSHHHHHHHHHTTCS-----------EEEEETCCCEEETTEEEEEESSHHHHHH
T ss_pred cchhhhHhHHHh---CCCccceEEeCCCHHHHHHHHHCCCc-----------EEEEeCCCCcccCCccccCccchhHHHH
Confidence 345677778888 99999999999999999999999973 234555664333333 3456666666
Q ss_pred HHHHHHH
Q 003025 835 MLEALAE 841 (856)
Q Consensus 835 ~L~~L~~ 841 (856)
+|+.+-.
T Consensus 197 ll~~v~~ 203 (209)
T d2o2xa1 197 LLAAIET 203 (209)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 6665543
|
| >d2go7a1 c.108.1.6 (A:3-206) Hypothetical protein SP2064 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein SP2064 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=97.99 E-value=2.6e-06 Score=83.32 Aligned_cols=64 Identities=14% Similarity=0.169 Sum_probs=54.9
Q ss_pred HHHHHHHHHHHhhhcCCCcceEEEEeCCchhHHHHHHccccccCCCCCCCccEEEEEeCCCccccceEcCChhHHHHHHH
Q 003025 758 KGVVAEKIFTTMAESGRHADFVLCIGDDRSDEDMFEIIGNATSSGVLSSNASVFACTVGQKPSKAKYYLDDAAEVVTMLE 837 (856)
Q Consensus 758 KG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~~s~A~y~l~~~~eV~~~L~ 837 (856)
|....+.+++++ |++|+++++|||+.+|+.+.+.+|.. +|.+......+.+.+++..++.++|+
T Consensus 139 ~~~~~~~~~~~~---~~~p~~~l~VgD~~~Di~~A~~~G~~-------------~i~v~~~~~~~~~~~~~~~dl~~l~~ 202 (204)
T d2go7a1 139 SPEAATYLLDKY---QLNSDNTYYIGDRTLDVEFAQNSGIQ-------------SINFLESTYEGNHRIQALADISRIFE 202 (204)
T ss_dssp SSHHHHHHHHHH---TCCGGGEEEEESSHHHHHHHHHHTCE-------------EEESSCCSCTTEEECSSTTHHHHHTS
T ss_pred hHHHHHHHHHHh---CCCCceEEEEeCCHHHHHHHHHcCCe-------------EEEEcCCCCCcCeecCCHHHHHHHhc
Confidence 788999999999 99999999999999999999999963 56676666778898888888776653
|
| >d2hdoa1 c.108.1.6 (A:1-207) Phosphoglycolate phosphatase {Lactobacillus plantarum [TaxId: 1590]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphoglycolate phosphatase species: Lactobacillus plantarum [TaxId: 1590]
Probab=97.92 E-value=6.3e-06 Score=80.73 Aligned_cols=63 Identities=14% Similarity=0.123 Sum_probs=50.9
Q ss_pred HHHHHHHHHHHhhhcCCCcceEEEEeCCchhHHHHHHccccccCCCCCCCccEEEEEeCCC----ccccceEcCChhHHH
Q 003025 758 KGVVAEKIFTTMAESGRHADFVLCIGDDRSDEDMFEIIGNATSSGVLSSNASVFACTVGQK----PSKAKYYLDDAAEVV 833 (856)
Q Consensus 758 KG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~----~s~A~y~l~~~~eV~ 833 (856)
+...++.+++++ |++++++++|||+.+|+.+-+.+|.. ++.|..|.. ...+.|.+++..+++
T Consensus 139 ~p~~~~~~~~~~---~~~~~~~l~VgDs~~Di~~a~~aG~~-----------~i~v~~g~~~~~~~~~~~~~i~~l~dll 204 (207)
T d2hdoa1 139 DPLPLLTALEKV---NVAPQNALFIGDSVSDEQTAQAANVD-----------FGLAVWGMDPNADHQKVAHRFQKPLDIL 204 (207)
T ss_dssp SSHHHHHHHHHT---TCCGGGEEEEESSHHHHHHHHHHTCE-----------EEEEGGGCCTTGGGSCCSEEESSGGGGG
T ss_pred hhhhhcccccce---eeeccceeEecCCHHHHHHHHHcCCe-----------EEEEecCCCChhHhhhcCcEeCCHHHHH
Confidence 678899999999 99999999999999999999999973 345555643 256788888887765
Q ss_pred H
Q 003025 834 T 834 (856)
Q Consensus 834 ~ 834 (856)
+
T Consensus 205 ~ 205 (207)
T d2hdoa1 205 E 205 (207)
T ss_dssp G
T ss_pred h
Confidence 4
|
| >d1te2a_ c.108.1.6 (A:) Phosphatase YniC {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphatase YniC species: Escherichia coli [TaxId: 562]
Probab=97.86 E-value=9.7e-07 Score=87.28 Aligned_cols=59 Identities=12% Similarity=-0.027 Sum_probs=47.5
Q ss_pred HHHHHHHHHHHhhhcCCCcceEEEEeCCchhHHHHHHccccccCCCCCCCccEEEEEeCC--C-----ccccceEcCChh
Q 003025 758 KGVVAEKIFTTMAESGRHADFVLCIGDDRSDEDMFEIIGNATSSGVLSSNASVFACTVGQ--K-----PSKAKYYLDDAA 830 (856)
Q Consensus 758 KG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~--~-----~s~A~y~l~~~~ 830 (856)
+....+.+++++ |++++++++|||+.+|+.+-+.+|.. +|.|.. . ...|++.+++..
T Consensus 146 ~~~~~~~~~~~l---~~~~~~~l~igD~~~di~aA~~~G~~-------------~i~v~~~~~~~~~~~~~a~~~i~~l~ 209 (218)
T d1te2a_ 146 HPQVYLDCAAKL---GVDPLTCVALEDSVNGMIASKAARMR-------------SIVVPAPEAQNDPRFVLANVKLSSLT 209 (218)
T ss_dssp STHHHHHHHHHH---TSCGGGEEEEESSHHHHHHHHHTTCE-------------EEECCCTTTTTCGGGGGSSEECSCGG
T ss_pred hHHHHHHHHHHc---CCCchhcEEEeeCHHHHHHHHHcCCE-------------EEEECCCCCccchhhcCCCEEECChh
Confidence 446789999999 99999999999999999999999963 454432 1 257888888877
Q ss_pred HH
Q 003025 831 EV 832 (856)
Q Consensus 831 eV 832 (856)
|+
T Consensus 210 el 211 (218)
T d1te2a_ 210 EL 211 (218)
T ss_dssp GC
T ss_pred hC
Confidence 64
|
| >d1swva_ c.108.1.3 (A:) Phosphonoacetaldehyde hydrolase {Bacillus cereus [TaxId: 1396]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphonoacetaldehyde hydrolase-like domain: Phosphonoacetaldehyde hydrolase species: Bacillus cereus [TaxId: 1396]
Probab=97.81 E-value=3e-06 Score=86.03 Aligned_cols=67 Identities=16% Similarity=0.220 Sum_probs=53.4
Q ss_pred HHHHHHHHHHhhhcCC-CcceEEEEeCCchhHHHHHHccccccCCCCCCCccEEEEEeCCC-------------------
Q 003025 759 GVVAEKIFTTMAESGR-HADFVLCIGDDRSDEDMFEIIGNATSSGVLSSNASVFACTVGQK------------------- 818 (856)
Q Consensus 759 G~al~~Ll~~l~~~gi-~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~------------------- 818 (856)
-.....+++++ |+ +++++++|||+.+|+.+-+.+|.. +++|+.|..
T Consensus 159 p~~~~~~~~~l---~~~p~~~~v~VgDs~~Di~aA~~aG~~-----------ti~v~~G~~~~~~~~~~~~~~~~~~~~~ 224 (257)
T d1swva_ 159 PWMCYKNAMEL---GVYPMNHMIKVGDTVSDMKEGRNAGMW-----------TVGVILGSSELGLTEEEVENMDSVELRE 224 (257)
T ss_dssp SHHHHHHHHHH---TCCSGGGEEEEESSHHHHHHHHHTTSE-----------EEEECTTCTTTCCCHHHHHHSCHHHHHH
T ss_pred hHHHHHHHHHh---CCCCcceEEEEeCChhhHHHHHHCCCE-----------EEEEccCCCCCCCCHHHHhhCCHHHHHH
Confidence 34677888888 88 569999999999999999999973 356666642
Q ss_pred ----------ccccceEcCChhHHHHHHHHH
Q 003025 819 ----------PSKAKYYLDDAAEVVTMLEAL 839 (856)
Q Consensus 819 ----------~s~A~y~l~~~~eV~~~L~~L 839 (856)
...|+|++++..|+..+|+.+
T Consensus 225 ~~~~~~~~l~~~gad~vi~~l~eL~~ii~~~ 255 (257)
T d1swva_ 225 KIEVVRNRFVENGAHFTIETMQELESVMEHI 255 (257)
T ss_dssp HHHHHHHHHHHTTCSEEESSGGGHHHHHHHH
T ss_pred HHHHHHHHHHhCCCCEEECCHHHHHHHHHHH
Confidence 124899999999988888765
|
| >d1x42a1 c.108.1.1 (A:1-230) Hypothetical protein PH0459 {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: Hypothetical protein PH0459 species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=97.72 E-value=7.4e-06 Score=81.61 Aligned_cols=68 Identities=16% Similarity=0.233 Sum_probs=54.5
Q ss_pred HHHHHHHHHHHhhhcCCCcceEEEEeCC-chhHHHHHHccccccCCCCCCCccEEEEEeCCC----ccccceEcCChhHH
Q 003025 758 KGVVAEKIFTTMAESGRHADFVLCIGDD-RSDEDMFEIIGNATSSGVLSSNASVFACTVGQK----PSKAKYYLDDAAEV 832 (856)
Q Consensus 758 KG~al~~Ll~~l~~~gi~~d~vlaiGD~-~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~----~s~A~y~l~~~~eV 832 (856)
+....+.+++++ |+++++++.|||+ .+|+.+-+.+|.. ++.+.-+.. ...++|++.+..++
T Consensus 157 ~~~~~~~~~~~l---~~~p~~~l~vgD~~~~Di~~A~~~G~~-----------~v~v~~~~~~~~~~~~~d~~i~~l~el 222 (230)
T d1x42a1 157 HPRIFELALKKA---GVKGEEAVYVGDNPVKDCGGSKNLGMT-----------SILLDRKGEKREFWDKCDFIVSDLREV 222 (230)
T ss_dssp SHHHHHHHHHHH---TCCGGGEEEEESCTTTTHHHHHTTTCE-----------EEEECTTSCCGGGGGGSSEEESSTTHH
T ss_pred hhHHHHHHHhhh---cccccccceeecCcHhHHHHHHHcCCE-----------EEEECCCCCCcccccCCCEEECCHHHH
Confidence 467899999999 9999999999998 5899999999863 122322222 35788999999999
Q ss_pred HHHHHHH
Q 003025 833 VTMLEAL 839 (856)
Q Consensus 833 ~~~L~~L 839 (856)
.++|++|
T Consensus 223 ~~~l~~l 229 (230)
T d1x42a1 223 IKIVDEL 229 (230)
T ss_dssp HHHHHHH
T ss_pred HHHHHHc
Confidence 9999876
|
| >d2fpwa1 c.108.1.19 (A:3-163) Histidine biosynthesis bifunctional protein HisB, phosphatase domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: Histidine biosynthesis bifunctional protein HisB, phosphatase domain species: Escherichia coli [TaxId: 562]
Probab=97.71 E-value=2.3e-05 Score=74.12 Aligned_cols=47 Identities=19% Similarity=0.337 Sum_probs=36.4
Q ss_pred cEEEEEecCCCCCCCCCC--------CCCCCHHHHHHHHHHHhhCCCeEEEecCCC
Q 003025 591 SRAILFDYDGTVMPQTSI--------NKAPSQAVISIINTLCNDARNTVFVVSGRG 638 (856)
Q Consensus 591 ~rlI~~DlDGTLl~~~~~--------~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~ 638 (856)
.|+||||.||||...... .-.+-+.+.++|+.| ++.|++++++|..+
T Consensus 2 ~K~i~~D~DGtL~~~~~~~~~~~~~~~~~~~pgv~e~L~~L-~~~g~~l~i~TNq~ 56 (161)
T d2fpwa1 2 QKYLFIDRDGTLISEPPSDFQVDRFDKLAFEPGVIPQLLKL-QKAGYKLVMITNQD 56 (161)
T ss_dssp CEEEEECCBTTTBCCC--CCCCCSGGGCCBCTTHHHHHHHH-HHTTEEEEEEEECT
T ss_pred CcEEEEeCCCCeEeeCCCCCccCCHHHceECccHHHHHHHH-HHcCCceeeecccc
Confidence 689999999999974321 113457889999998 78899999998763
|
| >d2gfha1 c.108.1.6 (A:1-247) N-acylneuraminate-9-phosphatase NANP {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: N-acylneuraminate-9-phosphatase NANP species: Mouse (Mus musculus) [TaxId: 10090]
Probab=97.68 E-value=1.4e-05 Score=80.22 Aligned_cols=72 Identities=13% Similarity=0.107 Sum_probs=56.7
Q ss_pred CCCH--HHHHHHHHHHhhhcCCCcceEEEEeCCc-hhHHHHHHccccccCCCCCCCccEEEEEeCC------CccccceE
Q 003025 755 GVSK--GVVAEKIFTTMAESGRHADFVLCIGDDR-SDEDMFEIIGNATSSGVLSSNASVFACTVGQ------KPSKAKYY 825 (856)
Q Consensus 755 gvsK--G~al~~Ll~~l~~~gi~~d~vlaiGD~~-ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~------~~s~A~y~ 825 (856)
+..| ....+.+++++ |++++++++|||+. +|+.+-+.+|.. ...+..+. ....++|+
T Consensus 161 ~~~KP~p~~~~~~~~~~---~~~~~~~l~iGD~~~~Di~~A~~~G~~-----------~~~~~~~~~~~~~~~~~~p~~~ 226 (247)
T d2gfha1 161 KEEKPAPSIFYHCCDLL---GVQPGDCVMVGDTLETDIQGGLNAGLK-----------ATVWINKSGRVPLTSSPMPHYM 226 (247)
T ss_dssp SSCTTCHHHHHHHHHHH---TCCGGGEEEEESCTTTHHHHHHHTTCS-----------EEEEECTTCCCCSSCCCCCSEE
T ss_pred ccchhhhhhHHHHHHHh---hcCHHhcceeccChHhHHHHHHHcCCe-----------EEEEECCCCCCcccccCCCCEE
Confidence 4556 67889999999 99999999999995 899999999973 11222222 13568899
Q ss_pred cCChhHHHHHHHHHH
Q 003025 826 LDDAAEVVTMLEALA 840 (856)
Q Consensus 826 l~~~~eV~~~L~~L~ 840 (856)
+++..++.++|+.+-
T Consensus 227 i~~l~eL~~ll~~i~ 241 (247)
T d2gfha1 227 VSSVLELPALLQSID 241 (247)
T ss_dssp ESSGGGHHHHHHHHT
T ss_pred ECCHHHHHHHHHHHh
Confidence 999999999999874
|
| >d2b8ea1 c.108.1.7 (A:416-434,A:548-663) Cation-transporting ATPase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Cation-transporting ATPase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=97.66 E-value=0.00015 Score=66.17 Aligned_cols=55 Identities=15% Similarity=0.166 Sum_probs=44.9
Q ss_pred cEEEEEecCCCCCCCCCCCCCCCHHHHHHHHHHHhhCCCeEEEecCCChhhHHHhhcC
Q 003025 591 SRAILFDYDGTVMPQTSINKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSP 648 (856)
Q Consensus 591 ~rlI~~DlDGTLl~~~~~~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~ 648 (856)
...+++|-+||++-. ....+-+.+.++++.| ++.|+.++++||........+...
T Consensus 3 ~~~~~~d~~~~~~~g--~~D~lr~~a~~~I~~L-~~~Gi~v~ilTGD~~~~a~~ia~~ 57 (135)
T d2b8ea1 3 VTAVIFDKTGTLTKG--KPDTLKESAKPAVQEL-KRMGIKVGMITGDNWRSAEAISRE 57 (135)
T ss_dssp CCEEEEECCCCCBCS--CCCCBCTTHHHHHHHH-HHTTCEEEEECSSCHHHHHHHHHH
T ss_pred EEEEEECCceEEEEe--cCCCCCccHHHHHHHH-HHcCCEEEEEcCcchhhhhHHHhh
Confidence 468999999999752 2345677888888886 788999999999999998888743
|
| >d1ltqa1 c.108.1.9 (A:153-301) Polynucleotide kinase, phosphatase domain {Bacteriophage T4 [TaxId: 10665]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: phosphatase domain of polynucleotide kinase domain: Polynucleotide kinase, phosphatase domain species: Bacteriophage T4 [TaxId: 10665]
Probab=97.57 E-value=3.6e-05 Score=71.03 Aligned_cols=51 Identities=25% Similarity=0.380 Sum_probs=41.7
Q ss_pred cCCcEEEEEecCCCCCCCCCC---------CCCCCHHHHHHHHHHHhhCCCeEEEecCCCh
Q 003025 588 RSKSRAILFDYDGTVMPQTSI---------NKAPSQAVISIINTLCNDARNTVFVVSGRGR 639 (856)
Q Consensus 588 ~s~~rlI~~DlDGTLl~~~~~---------~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~ 639 (856)
.++.|.|+||+||||++.... ...+-+.++++|+.| ++.|+.|+++|||+.
T Consensus 4 ~~kpk~vifDiDgTL~~~~~~~~~~~~~~~~~~~~p~v~~~l~~l-~~~G~~Iii~T~R~~ 63 (149)
T d1ltqa1 4 PGKPKAVIFDVDGTLAKMNGRGPYDLEKCDTDVINPMVVELSKMY-ALMGYQIVVVSGRES 63 (149)
T ss_dssp TTSCEEEEEETBTTTBCCSSCCTTCGGGGGGCCBCHHHHHHHHHH-HHTTCEEEEEECSCC
T ss_pred CCCCcEEEEEcCCCcEeCCCCCcCCccccccCccCHHHHHHHHHH-HhccCeEEEEecCcH
Confidence 467899999999999873221 235779999999998 788999999999963
|
| >d1o08a_ c.108.1.6 (A:) beta-Phosphoglucomutase {Lactococcus lactis [TaxId: 1358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: beta-Phosphoglucomutase species: Lactococcus lactis [TaxId: 1358]
Probab=97.55 E-value=3.1e-05 Score=76.20 Aligned_cols=66 Identities=11% Similarity=0.117 Sum_probs=47.7
Q ss_pred HHHHHHHHHHHhhhcCCCcceEEEEeCCchhHHHHHHccccccCCCCCCCccEEEEEeCCC--ccccceEcCChhH-HHH
Q 003025 758 KGVVAEKIFTTMAESGRHADFVLCIGDDRSDEDMFEIIGNATSSGVLSSNASVFACTVGQK--PSKAKYYLDDAAE-VVT 834 (856)
Q Consensus 758 KG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~--~s~A~y~l~~~~e-V~~ 834 (856)
+....+.+++++ |++++++++|||+.+|+.+.+.+|.. +|.|+.. ...+...+++..+ .++
T Consensus 147 ~~~~~~~~l~~~---~i~~~~~l~VgD~~~di~~A~~aG~~-------------~i~v~~~~~~~~~~~~~~~~~~~~~~ 210 (221)
T d1o08a_ 147 APDIFIAAAHAV---GVAPSESIGLEDSQAGIQAIKDSGAL-------------PIGVGRPEDLGDDIVIVPDTSHYTLE 210 (221)
T ss_dssp STHHHHHHHHHT---TCCGGGEEEEESSHHHHHHHHHHTCE-------------EEEESCHHHHCSSSEEESSGGGCCHH
T ss_pred ChHHHHHHHHHc---CCCCceEEEEecCHHHHHHHHHcCCE-------------EEEECChhhcccccEEcCCcccCCHH
Confidence 356789999999 99999999999999999999999963 5666543 3445555555422 344
Q ss_pred HHHHH
Q 003025 835 MLEAL 839 (856)
Q Consensus 835 ~L~~L 839 (856)
.|..|
T Consensus 211 ~l~el 215 (221)
T d1o08a_ 211 FLKEV 215 (221)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 44443
|
| >d1wpga2 c.108.1.7 (A:344-360,A:600-750) Calcium ATPase, catalytic domain P {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Calcium ATPase, catalytic domain P species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=97.28 E-value=0.00026 Score=67.06 Aligned_cols=158 Identities=18% Similarity=0.252 Sum_probs=98.1
Q ss_pred EEEEecCCCCCCCCCCCCCCCHHHHHHHHHHHhhCCCeEEEecCCChhhHHHhhcCCCCccEEeeCCEEEEeCCCcceEe
Q 003025 593 AILFDYDGTVMPQTSINKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSPCKKLGIAAEHGYFMRWSADEEWQN 672 (856)
Q Consensus 593 lI~~DlDGTLl~~~~~~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~~~~lgliaenG~~I~~~~~~~w~~ 672 (856)
++.+|-+|||+-.. . ..|-+.+.++++.| ++.|+.|+++||=........... +|+...+- ..+
T Consensus 4 ~~~~d~~~~~~~~~-~-Dp~R~~~~~~I~~l-~~~GI~v~miTGD~~~tA~~ia~~---~Gi~~~~~--------~v~-- 67 (168)
T d1wpga2 4 VICSDKTGTLTTNQ-L-DPPRKEVMGSIQLC-RDAGIRVIMITGDNKGTAIAICRR---IGIFGENE--------EVA-- 67 (168)
T ss_dssp EEEECCTTTTBCCC-E-CCBCTTHHHHHHHH-HHTTCEEEEECSSCHHHHHHHHHH---TTSSCTTC--------CCT--
T ss_pred EEEECCccEEEEEe-c-CCCchhHHHHHHHH-HHCcCEEEEECCCCHHHHHHHHHH---cCCCCCcc--------ccc--
Confidence 67889999998621 1 34567888899996 888999999999999999888854 44432221 000
Q ss_pred cCCCCcccHHHHHHHHHHHHhhcCCcceEEecccceEEeeecCCCCCCchhHHHHHHHHHHHhcCCCeEEEEcCeEEEEE
Q 003025 673 CGQSVDFGWIQIAEPVMKLYTESTDGSYIEIKESALVWHHRDADPGFGSSQAKELLDHLESVLANEPAAVKSGQFIVEVK 752 (856)
Q Consensus 673 ~~~~~~~~w~~~v~~i~~~~~~~~~Gs~ie~k~~~l~~~~~~~dp~~~~~~a~el~~~L~~~l~~~~~~v~~g~~~vEI~ 752 (856)
.....+.+.- .. ...+..+.+.+ ...+-++.
T Consensus 68 ---~~~~~~~~~~----------------------------~~-------~~~~~~~~~~~-----------~~v~ar~~ 98 (168)
T d1wpga2 68 ---DRAYTGREFD----------------------------DL-------PLAEQREACRR-----------ACCFARVE 98 (168)
T ss_dssp ---TTEEEHHHHH----------------------------HS-------CHHHHHHHHHH-----------CCEEESCC
T ss_pred ---cccccccccc----------------------------hh-------hHHHHhhhhhh-----------hhhhhccc
Confidence 0000110000 00 01122222211 11234455
Q ss_pred eCCCCHHHHHHHHHHHhhhcCCCcceEEEEeCCchhHHHHHHccccccCCCCCCCccEEEEEeCCC----ccccceEc--
Q 003025 753 PQGVSKGVVAEKIFTTMAESGRHADFVLCIGDDRSDEDMFEIIGNATSSGVLSSNASVFACTVGQK----PSKAKYYL-- 826 (856)
Q Consensus 753 p~gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~----~s~A~y~l-- 826 (856)
|. .|...++.+.+. | ..|.++||+.||.++|+.+.. ++++|+. +..|++++
T Consensus 99 p~--~K~~lv~~l~~~----g---~~Va~vGDG~nD~~AL~~Adv--------------GIa~~~gt~~a~~aAdivl~~ 155 (168)
T d1wpga2 99 PS--HKSKIVEYLQSY----D---EITAMTGDGVNDAPALKKAEI--------------GIAMGSGTAVAKTASEMVLAD 155 (168)
T ss_dssp HH--HHHHHHHHHHHT----T---CCEEEEECSGGGHHHHHHSSE--------------EEEETTSCHHHHHTCSEEETT
T ss_pred hh--HHHHHHHHHHhc----c---cceeEEecCCCCHHHHHhCCE--------------EEEeccccHHHHHhCCEEEcc
Confidence 54 377777776543 3 569999999999999999984 6777753 35688876
Q ss_pred CChhHHHHHHHH
Q 003025 827 DDAAEVVTMLEA 838 (856)
Q Consensus 827 ~~~~eV~~~L~~ 838 (856)
++...|.++++.
T Consensus 156 ~~l~~v~~~I~~ 167 (168)
T d1wpga2 156 DNFSTIVAAVEE 167 (168)
T ss_dssp CCTHHHHHHHHH
T ss_pred CCHHHHHHHHHc
Confidence 357888877753
|
| >d1xpja_ c.108.1.18 (A:) Hypothetical protein VC0232 {Vibrio cholerae [TaxId: 666]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Hypothetical protein VC0232 domain: Hypothetical protein VC0232 species: Vibrio cholerae [TaxId: 666]
Probab=97.27 E-value=0.00016 Score=64.61 Aligned_cols=46 Identities=20% Similarity=0.372 Sum_probs=38.7
Q ss_pred EEEEEecCCCCCCCCC---CCCCCCHHHHHHHHHHHhhCCCeEEEecCCC
Q 003025 592 RAILFDYDGTVMPQTS---INKAPSQAVISIINTLCNDARNTVFVVSGRG 638 (856)
Q Consensus 592 rlI~~DlDGTLl~~~~---~~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~ 638 (856)
|-|++|+||||+.... ....|-+.+++.|+.| .+.|++++|.|+|+
T Consensus 2 K~i~~DiDGTI~~~~~~~y~~~~P~~~~Ie~l~~l-~~~G~~Iii~TaR~ 50 (124)
T d1xpja_ 2 KKLIVDLDGTLTQANTSDYRNVLPRLDVIEQLREY-HQLGFEIVISTARN 50 (124)
T ss_dssp CEEEECSTTTTBCCCCSCGGGCCBCHHHHHHHHHH-HHTTCEEEEEECTT
T ss_pred CEEEEeCCCCeECCCCCCcCccCcCHHHHHHHHHH-HHCCCEEEEEecCC
Confidence 4689999999987332 2346889999999998 88899999999996
|
| >d2obba1 c.108.1.25 (A:1-122) Hypothetical protein BT0820 {Bacteroides thetaiotaomicron [TaxId: 818]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: BT0820-like domain: Hypothetical protein BT0820 species: Bacteroides thetaiotaomicron [TaxId: 818]
Probab=97.20 E-value=0.00016 Score=64.65 Aligned_cols=54 Identities=17% Similarity=0.294 Sum_probs=42.1
Q ss_pred EEEEecCCCCCCCCC-CCCCCCHHHHHHHHHHHhhCCCeEEEecCCChhh---HHHhhc
Q 003025 593 AILFDYDGTVMPQTS-INKAPSQAVISIINTLCNDARNTVFVVSGRGRDC---LGKWFS 647 (856)
Q Consensus 593 lI~~DlDGTLl~~~~-~~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~---l~~~~~ 647 (856)
-|++|+||||+.... ....|-+.+++.|++| .+.|+.++|.|||+... ...|+.
T Consensus 2 ti~vDiDGTl~~~~~~~~~kPi~~~Ie~l~~L-~~~G~~IIi~TaR~~~~~~~t~~wL~ 59 (122)
T d2obba1 2 TIAVDFDGTIVEHRYPRIGEEIPFAVETLKLL-QQEKHRLILWSVREGELLDEAIEWCR 59 (122)
T ss_dssp EEEECCBTTTBCSCTTSCCCBCTTHHHHHHHH-HHTTCEEEECCSCCHHHHHHHHHHHH
T ss_pred EEEEEcCCCcCCCCCCccccccHHHHHHHHHH-HHCCCeEEEEecCCCcchHHHHHHHH
Confidence 379999999986332 2345778999999998 78899999999998754 445553
|
| >d1cr6a1 c.108.1.2 (A:4-225) Epoxide hydrolase, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: YihX-like domain: Epoxide hydrolase, N-terminal domain species: Mouse (Mus musculus) [TaxId: 10090]
Probab=96.87 E-value=0.00017 Score=70.46 Aligned_cols=37 Identities=14% Similarity=0.107 Sum_probs=34.4
Q ss_pred HHHHHHHHHHHhhhcCCCcceEEEEeCCchhHHHHHHccc
Q 003025 758 KGVVAEKIFTTMAESGRHADFVLCIGDDRSDEDMFEIIGN 797 (856)
Q Consensus 758 KG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~ 797 (856)
+....+.+++++ +++|+++++|||+.+|+.+-+.+|.
T Consensus 159 ~p~~~~~~~~~~---~v~p~~~l~IgD~~~Di~~A~~aG~ 195 (222)
T d1cr6a1 159 EPQIYNFLLDTL---KAKPNEVVFLDDFGSNLKPARDMGM 195 (222)
T ss_dssp CHHHHHHHHHHH---TSCTTSEEEEESSSTTTHHHHHHTC
T ss_pred ChHHHHHHHHHh---CCCcceEEEEECCHHHHHHHHHcCC
Confidence 477788899999 9999999999999999999999996
|
| >d2fi1a1 c.108.1.3 (A:4-190) Putative hydrolase SP0805 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphonoacetaldehyde hydrolase-like domain: Putative hydrolase SP0805 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=96.46 E-value=0.00083 Score=64.04 Aligned_cols=34 Identities=18% Similarity=-0.006 Sum_probs=29.4
Q ss_pred HHHHHHHHHHhhhcCCCcceEEEEeCCchhHHHHHHccc
Q 003025 759 GVVAEKIFTTMAESGRHADFVLCIGDDRSDEDMFEIIGN 797 (856)
Q Consensus 759 G~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~ 797 (856)
....+.+++++ ++ +.+++|||+.+|+.+.+.+|.
T Consensus 137 p~~~~~~~~~~---~~--~~~l~vgDs~~Di~aA~~aG~ 170 (187)
T d2fi1a1 137 PESMLYLREKY---QI--SSGLVIGDRPIDIEAGQAAGL 170 (187)
T ss_dssp CHHHHHHHHHT---TC--SSEEEEESSHHHHHHHHHTTC
T ss_pred HHHHHHHHHHc---CC--CCeEEEeCCHHHHHHHHHcCC
Confidence 56788888887 65 569999999999999999996
|
| >d1qyia_ c.108.1.13 (A:) Hypothetical protein MW1667 (SA1546) {Staphylococcus aureus [TaxId: 1280]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Hypothetical protein MW1667 (SA1546) domain: Hypothetical protein MW1667 (SA1546) species: Staphylococcus aureus [TaxId: 1280]
Probab=95.57 E-value=0.0022 Score=68.60 Aligned_cols=58 Identities=26% Similarity=0.318 Sum_probs=48.7
Q ss_pred CCCcceEEEEeCCchhHHHHHHccccccCCCCCCCccEEEEEeCCCc---------cccceEcCChhHHHHHHHHHHH
Q 003025 773 GRHADFVLCIGDDRSDEDMFEIIGNATSSGVLSSNASVFACTVGQKP---------SKAKYYLDDAAEVVTMLEALAE 841 (856)
Q Consensus 773 gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~~---------s~A~y~l~~~~eV~~~L~~L~~ 841 (856)
+..++.|+++||+.||.+|.+.+|.. +++|++|... ..|+|++++..++.++|..|.+
T Consensus 312 ~~~~~~~~~vGD~~~D~~aak~Ag~~-----------~Igv~~G~~g~~~~~el~~~~AD~ii~~~~el~~il~~l~~ 378 (380)
T d1qyia_ 312 IVNKDDVFIVGDSLADLLSAQKIGAT-----------FIGTLTGLKGKDAAGELEAHHADYVINHLGELRGVLDNLLE 378 (380)
T ss_dssp CSCTTTEEEEESSHHHHHHHHHHTCE-----------EEEESCBTTBGGGHHHHHHTTCSEEESSGGGHHHHHSCTTT
T ss_pred CCCCCeEEEECCCHHHHHHHHHCCCC-----------EEEEecCCCCcccHHHHHhCCCCEEECCHHHHHHHHHHHHh
Confidence 78899999999999999999999863 4678888542 2699999999999999877653
|
| >d2fdra1 c.108.1.6 (A:3-224) Hypothetical protein Atu0790 {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein Atu0790 species: Agrobacterium tumefaciens [TaxId: 358]
Probab=95.26 E-value=0.015 Score=55.92 Aligned_cols=69 Identities=17% Similarity=0.167 Sum_probs=57.5
Q ss_pred HHHHHHHHHHHhhhcCCCcceEEEEeCCchhHHHHHHccccccCCCCCCCccEEEEEeCCC--c--------cccceEcC
Q 003025 758 KGVVAEKIFTTMAESGRHADFVLCIGDDRSDEDMFEIIGNATSSGVLSSNASVFACTVGQK--P--------SKAKYYLD 827 (856)
Q Consensus 758 KG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~--~--------s~A~y~l~ 827 (856)
+......+++++ |++++++++|||+.+|+.+-+.+|.. +++|+.|.. + ..|.++++
T Consensus 143 ~~~~~~~~~~~l---~~~p~~~l~vgDs~~dv~aA~~aG~~-----------~i~v~~~~~~~~~~~~~l~~~~ad~vi~ 208 (222)
T d2fdra1 143 KPDIFLHGAAQF---GVSPDRVVVVEDSVHGIHGARAAGMR-----------VIGFTGASHTYPSHADRLTDAGAETVIS 208 (222)
T ss_dssp SSHHHHHHHHHH---TCCGGGEEEEESSHHHHHHHHHTTCE-----------EEEECCSTTCCTTHHHHHHHHTCSEEES
T ss_pred CHHHHHHHHHhh---CCCCceEEEEcCCHHHHHHHHHcCCE-----------EEEEccCCCCCcchHHHHHhCCCCEEEC
Confidence 457888999999 99999999999999999999999963 356666642 1 24889999
Q ss_pred ChhHHHHHHHHHH
Q 003025 828 DAAEVVTMLEALA 840 (856)
Q Consensus 828 ~~~eV~~~L~~L~ 840 (856)
+..++..+|..|+
T Consensus 209 ~l~eL~~ll~~l~ 221 (222)
T d2fdra1 209 RMQDLPAVIAAMA 221 (222)
T ss_dssp CGGGHHHHHHHHT
T ss_pred CHHHHHHHHHHhc
Confidence 9999999999886
|
| >d1qq5a_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Xanthobacter autotrophicus [TaxId: 280]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: L-2-Haloacid dehalogenase, HAD species: Xanthobacter autotrophicus [TaxId: 280]
Probab=94.09 E-value=0.05 Score=52.75 Aligned_cols=70 Identities=13% Similarity=0.132 Sum_probs=55.9
Q ss_pred CCCH--HHHHHHHHHHhhhcCCCcceEEEEeCCchhHHHHHHccccccCCCCCCCccEEEEEeCC---------------
Q 003025 755 GVSK--GVVAEKIFTTMAESGRHADFVLCIGDDRSDEDMFEIIGNATSSGVLSSNASVFACTVGQ--------------- 817 (856)
Q Consensus 755 gvsK--G~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~--------------- 817 (856)
+..| ....+.+++++ |++|+++++|||+.+|+..-+.+|.. +|-|-.
T Consensus 144 ~~~KP~p~~f~~a~~~l---g~~p~e~l~VgD~~~di~~A~~aG~~-------------tv~v~r~~~~~~~~~~~~~~~ 207 (245)
T d1qq5a_ 144 RVFKPHPDSYALVEEVL---GVTPAEVLFVSSNGFDVGGAKNFGFS-------------VARVARLSQEALARELVSGTI 207 (245)
T ss_dssp TCCTTSHHHHHHHHHHH---CCCGGGEEEEESCHHHHHHHHHHTCE-------------EEEECCSCHHHHHHHTTSSSC
T ss_pred cccCccHHHHHHHHHHh---CCChhhEEEEeCCHHHHHHHHHcCCe-------------EEEEcCCCccccccccccccc
Confidence 3445 45778899999 99999999999999999999999973 454421
Q ss_pred ---------------CccccceEcCChhHHHHHHHHHH
Q 003025 818 ---------------KPSKAKYYLDDAAEVVTMLEALA 840 (856)
Q Consensus 818 ---------------~~s~A~y~l~~~~eV~~~L~~L~ 840 (856)
....++|++++..++.++|+.|+
T Consensus 208 ~~~~~~~~~~~~~~~~~~~pd~~i~~l~el~~lv~~~~ 245 (245)
T d1qq5a_ 208 APLTMFKALRMREETYAEAPDFVVPALGDLPRLVRGMA 245 (245)
T ss_dssp CHHHHHHHHHSSCCTTSCCCSEEESSGGGHHHHHHHHC
T ss_pred ccchhhhhhhhhhhhccCCCCEEECCHHHHHHHHHhhC
Confidence 12457899999999999999875
|
| >d1yj5a1 c.108.1.9 (A:144-338) 5' polynucleotide kinase-3' phosphatase, middle domain {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: phosphatase domain of polynucleotide kinase domain: 5' polynucleotide kinase-3' phosphatase, middle domain species: Mouse (Mus musculus) [TaxId: 10090]
Probab=93.73 E-value=0.017 Score=55.32 Aligned_cols=49 Identities=14% Similarity=0.263 Sum_probs=36.4
Q ss_pred cCCcEEEEEecCCCCCCCCCC--------CCC-CCHHHHHHHHHHHhhCCCeEEEecCC
Q 003025 588 RSKSRAILFDYDGTVMPQTSI--------NKA-PSQAVISIINTLCNDARNTVFVVSGR 637 (856)
Q Consensus 588 ~s~~rlI~~DlDGTLl~~~~~--------~~~-~s~~~~~aL~~L~~d~g~~V~I~TGR 637 (856)
+...|+++||.||||+...+. +-. +.+.+.++|+.| .+.|..++|+|--
T Consensus 18 ~~~~Kia~fDrDGtLik~~~~~~~~~~~~d~~~l~~~v~~~i~~L-~~~gy~iiIvTNQ 75 (195)
T d1yj5a1 18 KPQGKVAAFDLDGTLITTRSGKVFPTSPSDWRILYPEIPKKLQEL-AAEGYKLVIFTNQ 75 (195)
T ss_dssp CCCSCEEEECSBTTTEECSSSCSSCSSTTCCEESCTTHHHHHHHH-HHHTCEEEEEEEC
T ss_pred CCcCcEEEEECCCceEeeCCCCcCCCChhhceeccCCHHHHHHHH-HhCCcEEEEecCc
Confidence 345789999999999852211 101 368899999998 6779999999965
|
| >d2b82a1 c.108.1.12 (A:4-212) Class B acid phosphatase, AphA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Class B acid phosphatase, AphA domain: Class B acid phosphatase, AphA species: Escherichia coli [TaxId: 562]
Probab=93.13 E-value=0.018 Score=55.53 Aligned_cols=66 Identities=21% Similarity=0.307 Sum_probs=50.4
Q ss_pred cccCCHHHHHHHHHcCCcEEEEEecCCCCCCCCC-------------------------------CCCCCCHHHHHHHHH
Q 003025 574 FRKLSIDAIVSAYLRSKSRAILFDYDGTVMPQTS-------------------------------INKAPSQAVISIINT 622 (856)
Q Consensus 574 f~~l~~~~i~~~y~~s~~rlI~~DlDGTLl~~~~-------------------------------~~~~~s~~~~~aL~~ 622 (856)
..-.++.++.+.++..+...|+||+|-|+++..+ ....+-+.+++.|+.
T Consensus 18 ~~w~~~~~i~~~~~g~~P~AIifDIDETvLdnspy~~~~~~~~~~~~~~y~~~~~~W~~~~~~~~~~A~p~pga~~fl~~ 97 (209)
T d2b82a1 18 IHWVSVAQIENSLAGRPPMAVGFDIDDTVLFSSPGFWRGKKTFSPESEDYLKNPVFWEKMNNGWDEFSIPKEVARQLIDM 97 (209)
T ss_dssp CEEECHHHHHHHTTTCCCCEEEECCBTTTEECHHHHHHHHHHHCTTSSGGGGCHHHHHHHHTTGGGGCEECHHHHHHHHH
T ss_pred cceEEHHHHHHhcCCCCCceEEEcchhhhhcCcHHHHhhhhhcCcCcccccCCCcchHHHhcccccccCcchhHHHHHHH
Confidence 3446788899998887778999999999997211 001244678888888
Q ss_pred HHhhCCCeEEEecCCChh
Q 003025 623 LCNDARNTVFVVSGRGRD 640 (856)
Q Consensus 623 L~~d~g~~V~I~TGR~~~ 640 (856)
+ +++|+.|+++|||+..
T Consensus 98 ~-~~~Gv~IfyVTnR~~~ 114 (209)
T d2b82a1 98 H-VRRGDAIFFVTGRSPT 114 (209)
T ss_dssp H-HHHTCEEEEEECSCCC
T ss_pred H-HHcCCeEEEEeCCchh
Confidence 5 8889999999999744
|
| >d1zrna_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Pseudomonas sp., strain YL [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: L-2-Haloacid dehalogenase, HAD species: Pseudomonas sp., strain YL [TaxId: 306]
Probab=92.74 E-value=0.087 Score=50.06 Aligned_cols=65 Identities=17% Similarity=0.168 Sum_probs=51.1
Q ss_pred CCCCHH--HHHHHHHHHhhhcCCCcceEEEEeCCchhHHHHHHccccccCCCCCCCccEEEEEeC--C-----Cccccce
Q 003025 754 QGVSKG--VVAEKIFTTMAESGRHADFVLCIGDDRSDEDMFEIIGNATSSGVLSSNASVFACTVG--Q-----KPSKAKY 824 (856)
Q Consensus 754 ~gvsKG--~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG--~-----~~s~A~y 824 (856)
.+..|. ...+.+++++ |++++++++|||+.+|+..-+.+|.. +|-|. . ....|+|
T Consensus 145 ~~~~KP~p~~~~~~~~~~---g~~p~e~l~VgD~~~Di~~A~~aG~~-------------~v~v~r~~~~~~~~~~~~d~ 208 (220)
T d1zrna_ 145 VQVYKPDNRVYELAEQAL---GLDRSAILFVASNAWDATGARYFGFP-------------TCWINRTGNVFEEMGQTPDW 208 (220)
T ss_dssp GTCCTTSHHHHHHHHHHH---TSCGGGEEEEESCHHHHHHHHHHTCC-------------EEEECTTCCCCCSSSCCCSE
T ss_pred eeccccHHHHHHHHHHHh---CCCCceEEEEecChHhHHHHHHcCCE-------------EEEEcCCCCCcccccCCCCE
Confidence 455565 5888899999 99999999999999999999999974 44442 1 1356889
Q ss_pred EcCChhHHHH
Q 003025 825 YLDDAAEVVT 834 (856)
Q Consensus 825 ~l~~~~eV~~ 834 (856)
++++..++.+
T Consensus 209 ~i~~l~el~~ 218 (220)
T d1zrna_ 209 EVTSLRAVVE 218 (220)
T ss_dssp EESSHHHHHT
T ss_pred EECCHHHHHh
Confidence 8998887765
|
| >d1v4va_ c.87.1.3 (A:) UDP-N-acetylglucosamine 2-epimerase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDP-N-acetylglucosamine 2-epimerase domain: UDP-N-acetylglucosamine 2-epimerase species: Thermus thermophilus [TaxId: 274]
Probab=92.47 E-value=1.1 Score=46.47 Aligned_cols=249 Identities=15% Similarity=0.145 Sum_probs=144.4
Q ss_pred HHHHHHHHHHHHHcCCCCCEEEEeCcccchHHHHHHhhcCCCeEEEEEccCCCChHHHhcCCchHHHHHHhH--hCCEEc
Q 003025 184 SANKIFSQRVIEVINPEDDYVWIHDYHLMVLPTFLRRRFTRLRMGFFLHSPFPSSEIYRTLPVREEILKALL--NADLIG 261 (856)
Q Consensus 184 ~vN~~fa~~i~~~~~~~~D~VwihDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~~~~lp~r~eil~~ll--~~dlig 261 (856)
.+-..+++ +++..+| |+|.||.=-.-.|+.-+-....++||+.. |-=-.+.++.. |..+++.|-+. .||+--
T Consensus 75 ~~~~~~~~-~l~~~kP--D~vlv~GDr~e~la~a~aa~~~~ipi~Hi-egG~rsg~~~~--~~~de~~R~~iskls~~hf 148 (373)
T d1v4va_ 75 RILPQAAR-ALKEMGA--DYVLVHGDTLTTFAVAWAAFLEGIPVGHV-EAGLRSGNLKE--PFPEEANRRLTDVLTDLDF 148 (373)
T ss_dssp HHHHHHHH-HHHHTTC--SEEEEESSCHHHHHHHHHHHHTTCCEEEE-TCCCCCSCTTS--STTHHHHHHHHHHHCSEEE
T ss_pred HHHHHHhh-hhhhcCc--ccccccccCccchhHHHHHHHhhhhheee-ccccccccccc--Ccchhhhhhhhccccceee
Confidence 34444444 4566688 89999988888888777677778888743 21111222222 34455444321 356665
Q ss_pred ccCHHHHHHHHHHHHhhhCceecccCceeeEEECCEEEEEEEeecccCchHHHHHhcCchHHHHHHHHHHH----cCCCe
Q 003025 262 FHTFDYARHFLSCCSRMLGLEYQSKRGYIGLEYYGRTVGIKIMPVGIHMGQIESVLRLADKDWRVQELKQQ----FEGKT 337 (856)
Q Consensus 262 f~t~~~~~~Fl~~~~r~lg~~~~~~~~~~~~~~~gr~~~i~i~p~GId~~~~~~~~~~~~~~~~~~~l~~~----~~~k~ 337 (856)
--|..+.++.++ +|.+. .+ +..-| -+++|- +.. ...+... ..++.
T Consensus 149 ~~t~~~~~~L~~-----~Ge~~--~~----I~~vG--------~p~~D~--i~~----------~~~~~~~~~~~~~~~~ 197 (373)
T d1v4va_ 149 APTPLAKANLLK-----EGKRE--EG----ILVTG--------QTGVDA--VLL----------AAKLGRLPEGLPEGPY 197 (373)
T ss_dssp ESSHHHHHHHHT-----TTCCG--GG----EEECC--------CHHHHH--HHH----------HHHHCCCCTTCCSSCE
T ss_pred ecchhhhhhhhh-----hcccc--cc----eeecc--------cchhhH--HHh----------hhhhcccccccccccc
Confidence 567777777665 24321 11 11111 123331 111 1111111 13567
Q ss_pred EEEeccCccccCCHHHHHHHHHHHHHhCCCCcCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCcccEEEE
Q 003025 338 VLLGVDDMDIFKGVDLKLLAMEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFI 417 (856)
Q Consensus 338 iil~VdRld~~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~~~~lv~~IN~~~~~~~~~pvv~~ 417 (856)
+++..-|....+.....+.++..+.+.+++.. ++.... . . +. .+..+.+. .. ....+.+
T Consensus 198 ~lvt~hr~~n~~~~~~~~~~~~~~~~~~~~~~----~i~p~~-~--~-~~---~~~~~~~~----~~-----~~~n~~~- 256 (373)
T d1v4va_ 198 VTVTMHRRENWPLLSDLAQALKRVAEAFPHLT----FVYPVH-L--N-PV---VREAVFPV----LK-----GVRNFVL- 256 (373)
T ss_dssp EEECCCCGGGGGGHHHHHHHHHHHHHHCTTSE----EEEECC-S--C-HH---HHHHHHHH----HT-----TCTTEEE-
T ss_pred eeEEeccccccchHHHHHHHHHHHhhhcccce----eeeeec-c--c-cc---chhhhhhh----hc-----cccccee-
Confidence 88889999988899999999999988887653 433322 2 1 11 11111111 11 1223554
Q ss_pred cCCCCHHHHHHHHHhcceeeeccccccCCCcccceeeeecCCCCCCCCCCCCCCCCceEEecCCcccccc-c-CCceeeC
Q 003025 418 DKPVTLSERAAYYTIAECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIGCSPS-L-SGAIRVN 495 (856)
Q Consensus 418 ~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~-l-~~al~Vn 495 (856)
..+++..+...+++.|++++=.|- -...||.+.+. |+|.=...|-.+. + .|...+-
T Consensus 257 ~~~l~~~~~l~ll~~s~~vignSs-----sgi~Ea~~lg~-----------------P~Inir~~~eRqeg~~~g~nvlv 314 (373)
T d1v4va_ 257 LDPLEYGSMAALMRASLLLVTDSG-----GLQEEGAALGV-----------------PVVVLRNVTERPEGLKAGILKLA 314 (373)
T ss_dssp ECCCCHHHHHHHHHTEEEEEESCH-----HHHHHHHHTTC-----------------CEEECSSSCSCHHHHHHTSEEEC
T ss_pred eccchHHHHHHHhhhceeEecccc-----hhhhcchhhcC-----------------cEEEeCCCccCHHHHhcCeeEEc
Confidence 458999999999999999887663 34569988854 6776655444432 3 3433334
Q ss_pred CCCHHHHHHHHHHHHcC
Q 003025 496 PWNIEATAEAMHEAIQM 512 (856)
Q Consensus 496 P~d~~~~A~ai~~aL~m 512 (856)
+.|.+++..++..+|..
T Consensus 315 ~~d~~~I~~~i~~~l~~ 331 (373)
T d1v4va_ 315 GTDPEGVYRVVKGLLEN 331 (373)
T ss_dssp CSCHHHHHHHHHHHHTC
T ss_pred CCCHHHHHHHHHHHHcC
Confidence 55999999999999973
|
| >d1zs9a1 c.108.1.22 (A:4-256) E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Enolase-phosphatase E1 domain: E-1 enzyme species: Human(Homo sapiens) [TaxId: 9606]
Probab=90.52 E-value=0.16 Score=48.72 Aligned_cols=38 Identities=16% Similarity=0.147 Sum_probs=33.0
Q ss_pred HHHHHHHHHHHhhhcCCCcceEEEEeCCchhHHHHHHcccc
Q 003025 758 KGVVAEKIFTTMAESGRHADFVLCIGDDRSDEDMFEIIGNA 798 (856)
Q Consensus 758 KG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~ 798 (856)
+..+.+..++++ |++++++++|||+.+|+..-+.+|..
T Consensus 186 ~p~~~~~~~~~~---~~~p~~~l~vgD~~~dv~aA~~aG~~ 223 (253)
T d1zs9a1 186 ESESYRKIADSI---GCSTNNILFLTDVTREASAAEEADVH 223 (253)
T ss_dssp CHHHHHHHHHHH---TSCGGGEEEEESCHHHHHHHHHTTCE
T ss_pred CcHHHHHHHHHh---CCCcCcEEEEeCCHHHHHHHHHcCCE
Confidence 455666777888 99999999999999999999999973
|
| >d1zs9a1 c.108.1.22 (A:4-256) E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Enolase-phosphatase E1 domain: E-1 enzyme species: Human(Homo sapiens) [TaxId: 9606]
Probab=89.26 E-value=0.14 Score=49.09 Aligned_cols=16 Identities=38% Similarity=0.708 Sum_probs=14.4
Q ss_pred CCcEEEEEecCCCCCC
Q 003025 589 SKSRAILFDYDGTVMP 604 (856)
Q Consensus 589 s~~rlI~~DlDGTLl~ 604 (856)
+.+|.|+||+||||++
T Consensus 5 ~~i~~vlfD~dGTl~~ 20 (253)
T d1zs9a1 5 AEVTVILLDIEGTTTP 20 (253)
T ss_dssp TTCCEEEECCBTTTBC
T ss_pred CCCCEEEEeCcCCCcc
Confidence 5689999999999986
|
| >d2b0ca1 c.108.1.2 (A:8-204) Putative phosphatase YihX {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: YihX-like domain: Putative phosphatase YihX species: Escherichia coli [TaxId: 562]
Probab=88.11 E-value=0.16 Score=46.53 Aligned_cols=38 Identities=8% Similarity=0.156 Sum_probs=34.7
Q ss_pred HHHHHHHHHHHhhhcCCCcceEEEEeCCchhHHHHHHcccc
Q 003025 758 KGVVAEKIFTTMAESGRHADFVLCIGDDRSDEDMFEIIGNA 798 (856)
Q Consensus 758 KG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~ 798 (856)
+....+.+++.+ |++++++++|||+.+|+...+.+|..
T Consensus 143 ~~~~~~~~~~~~---~~~~~~~l~vgDs~~di~~A~~aG~~ 180 (197)
T d2b0ca1 143 EARIYQHVLQAE---GFSPSDTVFFDDNADNIEGANQLGIT 180 (197)
T ss_dssp CHHHHHHHHHHH---TCCGGGEEEEESCHHHHHHHHTTTCE
T ss_pred chHHHHHHHHhc---CCCCCeEEEEeCCHHHHHHHHHcCCE
Confidence 677788999999 99999999999999999999999963
|
| >d1pn3a_ c.87.1.5 (A:) TDP-epi-vancosaminyltransferase GtfA {Amycolatopsis orientalis [TaxId: 31958]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Gtf glycosyltransferase domain: TDP-epi-vancosaminyltransferase GtfA species: Amycolatopsis orientalis [TaxId: 31958]
Probab=87.53 E-value=0.28 Score=50.37 Aligned_cols=99 Identities=13% Similarity=0.106 Sum_probs=63.4
Q ss_pred EEcCCCCHHHHHHHHHhcceeeeccccccCCCcccceeeeecCCCCCCCCCCCCCCCCceEEecCCccc--------ccc
Q 003025 416 FIDKPVTLSERAAYYTIAECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIGC--------SPS 487 (856)
Q Consensus 416 ~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~--------~~~ 487 (856)
.+.+.+++.++ +..||+||..+ |.| +..|+++|+. |+|+.-+.+- ++.
T Consensus 273 ~i~~~~p~~~l---l~~a~~~v~hg---G~~-t~~Eal~~G~-----------------P~v~~P~~~d~~~eQ~~nA~~ 328 (391)
T d1pn3a_ 273 FVVGEVNLQEL---FGRVAAAIHHD---SAG-TTLLAMRAGI-----------------PQIVVRRVVDNVVEQAYHADR 328 (391)
T ss_dssp CEESSCCHHHH---HTTSSCEEEES---CHH-HHHHHHHHTC-----------------CEEEECSSCCBTTBCCHHHHH
T ss_pred EEecccCHHHH---HhhccEEEecC---chH-HHHHHHHhCC-----------------cEEEeccccCCcchHHHHHHH
Confidence 45667887654 67899999664 444 6789999965 7887766553 223
Q ss_pred c---CCceeeCCCC--HHHHHHHHHHHHcCCHHHHHHHHHHHhhhhhcCCHHHHHHHHH
Q 003025 488 L---SGAIRVNPWN--IEATAEAMHEAIQMNEAEKQLRHEKHYRYVSTHDVAYWARSFF 541 (856)
Q Consensus 488 l---~~al~VnP~d--~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~~l 541 (856)
+ ..|+.+++.+ .++++++|.++|+.+ -+++.+++.+.++......=++.+.
T Consensus 329 l~~~G~g~~l~~~~~~~~~l~~~i~~~l~~~---~r~~a~~~a~~~~~~g~~~aa~~i~ 384 (391)
T d1pn3a_ 329 VAELGVGVAVDGPVPTIDSLSAALDTALAPE---IRARATTVADTIRADGTTVAAQLLF 384 (391)
T ss_dssp HHHHTSEEEECCSSCCHHHHHHHHHHHTSTT---HHHHHHHHGGGSCSCHHHHHHHHHH
T ss_pred HHHCCCEEEcCcCCCCHHHHHHHHHHHhCHH---HHHHHHHHHHHHHhcCHHHHHHHHH
Confidence 3 2367776654 799999999999632 2334455666665544443334333
|
| >d1zd3a1 c.108.1.2 (A:2-224) Epoxide hydrolase, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: YihX-like domain: Epoxide hydrolase, N-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=85.92 E-value=0.7 Score=42.94 Aligned_cols=59 Identities=12% Similarity=0.134 Sum_probs=47.6
Q ss_pred HHHHHHHHHHHhhhcCCCcceEEEEeCCchhHHHHHHccccccCCCCCCCccEEEEEeCCCccccceEcCChhHHHHHHH
Q 003025 758 KGVVAEKIFTTMAESGRHADFVLCIGDDRSDEDMFEIIGNATSSGVLSSNASVFACTVGQKPSKAKYYLDDAAEVVTMLE 837 (856)
Q Consensus 758 KG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~~s~A~y~l~~~~eV~~~L~ 837 (856)
+....+.+++.+ |++++++++|||+..|+.+-+.+|.. +|- +++.....+-|+
T Consensus 161 ~~~~~~~~~~~~---~~~p~e~l~VgD~~~Di~~A~~~G~~-------------ti~-----------v~~~~~~~~~l~ 213 (225)
T d1zd3a1 161 EPQIYKFLLDTL---KASPSEVVFLDDIGANLKPARDLGMV-------------TIL-----------VQDTDTALKELE 213 (225)
T ss_dssp CHHHHHHHHHHH---TCCGGGEEEEESCHHHHHHHHHTTCE-------------EEE-----------CSSHHHHHHHHH
T ss_pred HHHHHHHHhhhc---ccCccceeEEecCHHHHHHHHHcCCE-------------EEE-----------ECCcchhHHHHH
Confidence 568889999999 99999999999999999999999963 443 355666777777
Q ss_pred HHHHhc
Q 003025 838 ALAEAS 843 (856)
Q Consensus 838 ~L~~~~ 843 (856)
++....
T Consensus 214 ~~~~~~ 219 (225)
T d1zd3a1 214 KVTGIQ 219 (225)
T ss_dssp HHHTSC
T ss_pred HccCcc
Confidence 776543
|
| >d1iira_ c.87.1.5 (A:) UDP-glucosyltransferase GtfB {Amycolatopsis orientalis [TaxId: 31958]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Gtf glycosyltransferase domain: UDP-glucosyltransferase GtfB species: Amycolatopsis orientalis [TaxId: 31958]
Probab=82.86 E-value=0.78 Score=46.66 Aligned_cols=97 Identities=12% Similarity=0.049 Sum_probs=61.2
Q ss_pred EEEcCCCCHHHHHHHHHhcceeeeccccccCCCcccceeeeecCCCCCCCCCCCCCCCCceEEecCCcc----ccccc--
Q 003025 415 VFIDKPVTLSERAAYYTIAECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIG----CSPSL-- 488 (856)
Q Consensus 415 v~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~g~lV~Se~~G----~~~~l-- 488 (856)
+.+.+.+++.+ +|..+|+||. -|-.-+..|+++++. |+|+.-+.+ .+..+
T Consensus 287 v~~~~~~p~~~---~l~~~~~~V~----hgG~~t~~Eal~~Gv-----------------P~v~~P~~~DQ~~na~~l~~ 342 (401)
T d1iira_ 287 CFAIGEVNHQV---LFGRVAAVIH----HGGAGTTHVAARAGA-----------------PQILLPQMADQPYYAGRVAE 342 (401)
T ss_dssp EEECSSCCHHH---HGGGSSEEEE----CCCHHHHHHHHHHTC-----------------CEEECCCSTTHHHHHHHHHH
T ss_pred EEEEeccCHHH---HHhhcCEEEe----cCCchHHHHHHHhCC-----------------CEEEccccccHHHHHHHHHH
Confidence 45667788654 4677999883 455566779999965 777754444 22333
Q ss_pred -CCceeeCCC--CHHHHHHHHHHHHcCCHHHHHHHHHHHhhhhhcCCHHHHHH
Q 003025 489 -SGAIRVNPW--NIEATAEAMHEAIQMNEAEKQLRHEKHYRYVSTHDVAYWAR 538 (856)
Q Consensus 489 -~~al~VnP~--d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~ 538 (856)
+.|+.+++. +.+++++||.++|+ ++. +++.+++.+.+++.....=++
T Consensus 343 ~G~g~~l~~~~~~~~~l~~ai~~~l~--~~~-~~~a~~~~~~~~~~~~~~aa~ 392 (401)
T d1iira_ 343 LGVGVAHDGPIPTFDSLSAALATALT--PET-HARATAVAGTIRTDGAAVAAR 392 (401)
T ss_dssp HTSEEECSSSSCCHHHHHHHHHHHTS--HHH-HHHHHHHHHHSCSCHHHHHHH
T ss_pred CCCEEEcCcCCCCHHHHHHHHHHHhC--HHH-HHHHHHHHHHHHhcChHHHHH
Confidence 337777765 68999999999995 332 344445555555543333333
|
| >d1rrva_ c.87.1.5 (A:) TDP-vancosaminyltransferase GftD {Amycolatopsis orientalis [TaxId: 31958]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Gtf glycosyltransferase domain: TDP-vancosaminyltransferase GftD species: Amycolatopsis orientalis [TaxId: 31958]
Probab=81.79 E-value=0.53 Score=48.25 Aligned_cols=97 Identities=14% Similarity=0.032 Sum_probs=63.6
Q ss_pred EEEcCCCCHHHHHHHHHhcceeeeccccccCCCcccceeeeecCCCCCCCCCCCCCCCCceEEecCCcc----ccccc--
Q 003025 415 VFIDKPVTLSERAAYYTIAECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIG----CSPSL-- 488 (856)
Q Consensus 415 v~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~g~lV~Se~~G----~~~~l-- 488 (856)
+.+.+.+|+.++ +..+|+||. -|-.-+..|+++++. |+|+.-+.+ .+..+
T Consensus 288 v~~~~~~p~~~l---l~~~~~~I~----hgG~~t~~Eal~~Gv-----------------P~l~~P~~~DQ~~na~~v~~ 343 (401)
T d1rrva_ 288 CFAIDEVNFQAL---FRRVAAVIH----HGSAGTEHVATRAGV-----------------PQLVIPRNTDQPYFAGRVAA 343 (401)
T ss_dssp EEEESSCCHHHH---GGGSSEEEE----CCCHHHHHHHHHHTC-----------------CEEECCCSBTHHHHHHHHHH
T ss_pred EEEEeccCcHHH---hhhccEEEe----cCCchHHHHHHHhCC-----------------CEEEecccccHHHHHHHHHH
Confidence 456668887665 567999884 444456689999955 777766655 23333
Q ss_pred -CCceeeCCC--CHHHHHHHHHHHHcCCHHHHHHHHHHHhhhhhcCCHHHHHH
Q 003025 489 -SGAIRVNPW--NIEATAEAMHEAIQMNEAEKQLRHEKHYRYVSTHDVAYWAR 538 (856)
Q Consensus 489 -~~al~VnP~--d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~ 538 (856)
+-|+.+++. +.+.++++|.++|+ ++ .+++.++..+.+.......=++
T Consensus 344 ~G~g~~l~~~~~~~~~L~~ai~~vl~--~~-~r~~a~~~~~~~~~~g~~~aa~ 393 (401)
T d1rrva_ 344 LGIGVAHDGPTPTFESLSAALTTVLA--PE-TRARAEAVAGMVLTDGAAAAAD 393 (401)
T ss_dssp HTSEEECSSSCCCHHHHHHHHHHHTS--HH-HHHHHHHHTTTCCCCHHHHHHH
T ss_pred CCCEEEcCcCCCCHHHHHHHHHHHhC--HH-HHHHHHHHHHHHhhcCHHHHHH
Confidence 337777775 48999999999984 43 3455556666666554444333
|
| >d1qq5a_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Xanthobacter autotrophicus [TaxId: 280]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: L-2-Haloacid dehalogenase, HAD species: Xanthobacter autotrophicus [TaxId: 280]
Probab=80.87 E-value=0.24 Score=47.56 Aligned_cols=15 Identities=33% Similarity=0.563 Sum_probs=14.3
Q ss_pred CcEEEEEecCCCCCC
Q 003025 590 KSRAILFDYDGTVMP 604 (856)
Q Consensus 590 ~~rlI~~DlDGTLl~ 604 (856)
|+|.|+||+||||++
T Consensus 1 MIKaviFD~dGTL~d 15 (245)
T d1qq5a_ 1 MIKAVVFDAYGTLFD 15 (245)
T ss_dssp CCCEEEECTBTTTBC
T ss_pred CCeEEEEeCCCCcEe
Confidence 689999999999998
|