BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 003028
         (856 letters)

Database: nr 
           23,463,169 sequences; 8,064,228,071 total letters

Searching..................................................done



>gi|255540881|ref|XP_002511505.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223550620|gb|EEF52107.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 876

 Score = 1338 bits (3463), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 648/879 (73%), Positives = 726/879 (82%), Gaps = 26/879 (2%)

Query: 1   MLRAKHITNLSSTARSFFLNGSRCSASDGSSCTCSEDETCVSRRQHNAQMVYTPARAGVV 60
           MLRAK ++NLSS ARSFFL+GSRCS SDGSSCTCSEDE+C+ RRQ          R   +
Sbjct: 1   MLRAKQLSNLSSNARSFFLSGSRCSTSDGSSCTCSEDESCLPRRQQTRNNAVLAQRGPAL 60

Query: 61  VS------------GEAAKAAGLQKSERVSVPS-------PSSLGRSDHVSYASSVDAVP 101
           V             G+A K     K E V  P+       P S+ +SD VSYAS +DAV 
Sbjct: 61  VPKASARVSQTSLLGDAGKLLVPHKVESVECPTLPQVVSAPISIRKSDCVSYASGIDAVE 120

Query: 102 KDV-LTSSPISDQFVKAGVAAVCFLSDLVNYKLPALDGSGTANSPTNFMVDPTRPLSNIK 160
            D+  +S PISDQF KAG+AAV FLSDLVNYKLP  DGSG  NSP N MVDPTRP S ++
Sbjct: 121 NDIPYSSPPISDQFFKAGIAAVSFLSDLVNYKLPITDGSGI-NSPKNCMVDPTRPQSTVR 179

Query: 161 PANVKTIRRENVSKVYPNSSAESTVGSNPSTGYHNAKDKGDNSNIARRFKRVSNASNGTS 220
            +NVK IRREN SKVYP +S E+ V S+ ++ Y + +DK + S+  +  KRVSN   G S
Sbjct: 180 SSNVKPIRRENCSKVYPKASPEAAVSSS-TSNYDSTRDKSEKSSFIKGSKRVSNTPAGNS 238

Query: 221 LETHNVSSDNSDRRRIVQPRSKAHSNRLNSNFKSNLQP---SDAKVVECVSERFSKPSRE 277
           ++T +++SD  DRR I Q +SK  SNR  +NF +N+Q    SD K  E V+E + KP RE
Sbjct: 239 VKTCSIASDTCDRRIIPQ-KSKGQSNRSTANFNANVQTVQTSDTKYGEYVAEDYRKPPRE 297

Query: 278 MKIPAGLAPFSRHFASTGNVVESVSRILRQWKWGPLAEEALGNTNYSMDAYQANQVLKQL 337
            K+P    P +R FAS G++VE+V+ ILRQ +WGP AEEAL N NYSMD YQANQVLKQL
Sbjct: 298 TKMPVVRVPSTRRFASNGHIVENVAHILRQIRWGPAAEEALANLNYSMDPYQANQVLKQL 357

Query: 338 QDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVT 397
           QDHTVAL FF WL+RQ GF HD HTYTTMVGILGRA+QFGAINKLLDQMV+DGCQPNVVT
Sbjct: 358 QDHTVALNFFYWLKRQPGFNHDGHTYTTMVGILGRAKQFGAINKLLDQMVKDGCQPNVVT 417

Query: 398 YNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQ 457
           YNRLIHSYGRANYLN+A+DVF +MQ VGCEPDRVTYCTLIDIHAKAGFLD A++MY++MQ
Sbjct: 418 YNRLIHSYGRANYLNDAVDVFNEMQRVGCEPDRVTYCTLIDIHAKAGFLDFALEMYQRMQ 477

Query: 458 AAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQ 517
           AAGLSPDTFTYSVIINCLGKAGHL AAH+LFCEMV QGC+PNLVTYNIMIALQAKARNYQ
Sbjct: 478 AAGLSPDTFTYSVIINCLGKAGHLAAAHKLFCEMVEQGCVPNLVTYNIMIALQAKARNYQ 537

Query: 518 SALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLV 577
           SALKLYRDMQ+AGF+PDKVTYSIVMEVLGHCGYLDEAEAVF+EM+RKNWVPDEPVYGLLV
Sbjct: 538 SALKLYRDMQSAGFQPDKVTYSIVMEVLGHCGYLDEAEAVFSEMKRKNWVPDEPVYGLLV 597

Query: 578 DLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLK 637
           DLWGKAGNV KAW+WY+ ML  GLRPNVPTCNSLLSAFLRV +L+DAY+LLQ ML LGL 
Sbjct: 598 DLWGKAGNVEKAWQWYQTMLNTGLRPNVPTCNSLLSAFLRVHKLADAYNLLQSMLELGLN 657

Query: 638 PSLQTYTLLLSCCTEARSPYDMGFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSF 697
           PSLQTYTLLLSCCTEARSPYDMG   ELMAV+GHPAHMFLLS+PS GPDGQNVRDH   F
Sbjct: 658 PSLQTYTLLLSCCTEARSPYDMGIYCELMAVTGHPAHMFLLSLPSAGPDGQNVRDHASKF 717

Query: 698 LEMMHSEDRESKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAVKEKGMSYWLIN 757
           L++MHSEDRESKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQ+NVYPDAVKEKG  YWLIN
Sbjct: 718 LDLMHSEDRESKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQRNVYPDAVKEKGSCYWLIN 777

Query: 758 LHVMSDGTAVIALSRTLAWFRKQMLISGVGPSRIDIVTGWGRRSRVTGTSLVRQAVQELL 817
           LHVMSDGTAV ALSRTLAWFR+QML+SG+ PSRIDIVTGWGRRSRVTG+S+VRQAVQELL
Sbjct: 778 LHVMSDGTAVTALSRTLAWFRQQMLVSGISPSRIDIVTGWGRRSRVTGSSMVRQAVQELL 837

Query: 818 HMFSFPFFTENGNSGCFVGCGEPLNKWLLQSYVDRMHLL 856
           H+FSFPFFTENGNSGCFVGCGEPLN+WLLQ YVDRMHLL
Sbjct: 838 HIFSFPFFTENGNSGCFVGCGEPLNRWLLQPYVDRMHLL 876


>gi|224133318|ref|XP_002321537.1| predicted protein [Populus trichocarpa]
 gi|222868533|gb|EEF05664.1| predicted protein [Populus trichocarpa]
          Length = 834

 Score = 1285 bits (3325), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 629/861 (73%), Positives = 709/861 (82%), Gaps = 32/861 (3%)

Query: 1   MLRAKHITNLSSTARSFFLNGSRCSASDGSS-CTCSEDETCVSRRQH---NAQMVYTPAR 56
           MLRAK + NLSS+ARSFFL+GSRCSA+DGSS CTCSEDETCVS RQ    +  +   P+ 
Sbjct: 1   MLRAKQLGNLSSSARSFFLSGSRCSATDGSSSCTCSEDETCVSTRQQPRNSILLAQKPSN 60

Query: 57  AGVVVSGEAAKAAGLQKSERVSVPSPSSLGRSDHVSYASSVDAVPKDVLTSSP-ISDQFV 115
            G   S     +     S  + +P  SS G S  VSYA  +D   KDV  SSP ISDQFV
Sbjct: 61  FGSKTSARVEASVSGDGSSFL-LPQKSSCGMSGCVSYAIGIDIAEKDVGHSSPPISDQFV 119

Query: 116 KAGVAAVCFLSDLVNYKLPALDGSGTANSPTNFMVDPTRPLSNIKPANVKTIRRENVSKV 175
           + G+AAV FLSDLVNYKLP  DG+   NS  N M+DPTR LSNIK +NVK IRREN +K 
Sbjct: 120 RVGIAAVSFLSDLVNYKLPTSDGT-VINSTINCMIDPTRQLSNIKSSNVKPIRRENFTKA 178

Query: 176 YPNSSAESTVGSNPSTGYHNAKDKGDNSNIARRFKRVSNASNGTSLETHNVSSDNSDRRR 235
           YPNSSAE  VGSN +  Y++ KD+G+ S+  R FK+VS+ +  +SL++H++ SD  D+RR
Sbjct: 179 YPNSSAEIPVGSNAAVNYNSMKDRGNKSSFVRGFKQVSSIAADSSLDSHSLPSDAFDKRR 238

Query: 236 IVQPRSKAHSNRLNSNFKSNLQPSDAKVVECVSERFSKPSREMKIPAGLAPFSRHFASTG 295
            +  R KA  NR                         +PSR+ K+PA +A  +R F STG
Sbjct: 239 TIPQRLKAQPNR-------------------------RPSRDTKMPAVVARSARQFVSTG 273

Query: 296 NVVESVSRILRQWKWGPLAEEALGNTNYSMDAYQANQVLKQLQDHTVALGFFNWLRRQAG 355
           +VVE+VS+ILRQ +WGP AEEAL N N  MDAYQANQVLKQLQDHTVALGFF+WL++  G
Sbjct: 274 HVVENVSQILRQLRWGPSAEEALVNLNCHMDAYQANQVLKQLQDHTVALGFFHWLKQLPG 333

Query: 356 FKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEAL 415
           FKHD +TYTTMVGILGRA+QF AINKLLDQMVRDGCQP VVTYNRLIHSYGRANYLN+A+
Sbjct: 334 FKHDGYTYTTMVGILGRAKQFVAINKLLDQMVRDGCQPTVVTYNRLIHSYGRANYLNDAV 393

Query: 416 DVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCL 475
           +VF QMQ  GCEPDRVTYCTLIDIHAKAGFL+ AM+MY++MQAAGLSPDTFTYSV+INCL
Sbjct: 394 EVFNQMQKAGCEPDRVTYCTLIDIHAKAGFLNFAMEMYQRMQAAGLSPDTFTYSVMINCL 453

Query: 476 GKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDK 535
           GKAGHL AA +LFCEM+ QGC+PNLVTYNIMIALQAKARNYQ+ALKLYRDMQNAGFEPDK
Sbjct: 454 GKAGHLAAADKLFCEMIEQGCVPNLVTYNIMIALQAKARNYQNALKLYRDMQNAGFEPDK 513

Query: 536 VTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEA 595
           VTYSIVMEVLGH GYLDEAEA+F+EM+RKNWVPDEPVYGLLVDLWGKAGNV KAWEWY+A
Sbjct: 514 VTYSIVMEVLGHSGYLDEAEAIFSEMKRKNWVPDEPVYGLLVDLWGKAGNVEKAWEWYQA 573

Query: 596 MLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARS 655
           ML AGL PNVPTCNSLLSAFLRV +L DAY+LLQ MLNLGL PSLQTYTLLLSCCTEARS
Sbjct: 574 MLHAGLCPNVPTCNSLLSAFLRVNRLPDAYNLLQSMLNLGLNPSLQTYTLLLSCCTEARS 633

Query: 656 PYDMGFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRESKRGLVDA 715
           PYDMG   ELM+V+GHPAHMFL S+PS GPDGQNVR HV  FL+MMHSEDRESKRGLVDA
Sbjct: 634 PYDMGCYCELMSVTGHPAHMFLSSLPSAGPDGQNVRHHVSKFLDMMHSEDRESKRGLVDA 693

Query: 716 VVDFLHKSGLKEEAGSVWEVAAQKNVYPDAVKEKGMSYWLINLHVMSDGTAVIALSRTLA 775
           VVDFLHKSGLKEEAGSVWE+AAQ+NVYPDAVKEK   YWLINLHVMS+GTAV ALSRTLA
Sbjct: 694 VVDFLHKSGLKEEAGSVWEIAAQRNVYPDAVKEKSSCYWLINLHVMSEGTAVTALSRTLA 753

Query: 776 WFRKQMLISGVGPSRIDIVTGWGRRSRVTGTSLVRQAVQELLHMFSFPFFTENGNSGCFV 835
           WFR+QML+SGV PSRIDIVTGWGRRSRVTG+SLVRQAVQELLH+FSFPFFTENGN+GCFV
Sbjct: 754 WFRRQMLVSGVIPSRIDIVTGWGRRSRVTGSSLVRQAVQELLHIFSFPFFTENGNTGCFV 813

Query: 836 GCGEPLNKWLLQSYVDRMHLL 856
           GCGEPL++WLLQSYV+RMHLL
Sbjct: 814 GCGEPLSRWLLQSYVERMHLL 834


>gi|225456631|ref|XP_002266698.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74750
           [Vitis vinifera]
          Length = 875

 Score = 1242 bits (3214), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 614/877 (70%), Positives = 696/877 (79%), Gaps = 23/877 (2%)

Query: 1   MLRAKHITNLSSTARSFFLNGSRCSASDGSSCTCSEDETCVSRRQHNAQMVY-------- 52
           MLR K I  LS++ARS  ++G+R S  DG+SC CSEDETCVS +QH    V         
Sbjct: 1   MLRTKQIGPLSNSARSILISGTRSSTPDGNSCPCSEDETCVSTKQHARNEVLIMQKQTTL 60

Query: 53  ---TPARAGVVVSGEAAKAAGLQKSERVS--------VPSPSSLGRSDHVSYASSVDAVP 101
              T AR G +  G+A K  G QK E V         V +P S+  SD VSY S    V 
Sbjct: 61  ASKTAARVGPLFLGDAVKVVGSQKVESVEHATSLAQVVAAPRSVVGSDCVSYVSDNVGVN 120

Query: 102 KDVLTSSPISDQFVKAGVAAVCFLSDLVNYKLPALDGSGTANSPTNFMVDPTRPLSNIKP 161
            D + + PISDQF++AG+ AV FLSDLVNYK+P  DGSG    P N MVDPT+PLS IK 
Sbjct: 121 NDAVHAPPISDQFIRAGIVAVNFLSDLVNYKIPMSDGSGMLKLPQNCMVDPTKPLSKIKS 180

Query: 162 ANVKTIRRENVSKVYPNSSAESTVGSNPSTGYHNAKDKGDNSNIARRFKRVSNASNGTSL 221
            N+K IR+   SKV   SSA     SN ++ YH+ + KGD S   +    V +     ++
Sbjct: 181 TNIKPIRKGKFSKVRAESSANIAAASNSTSSYHSTRGKGDKSGSVKGCSHVGDTWTRNTV 240

Query: 222 ETHNVSSDNSDRRRIVQPRSKAHSNRLNSNFKSNLQPS--DAKVVECVSERFSKPSREMK 279
           +T ++SSD  ++R + Q +SKA+SN   SN   N      + + V  ++  FSKP R+ K
Sbjct: 241 DTRSLSSDTHNKRSMPQ-KSKAYSNYSTSNSNFNSNVRNSEPRFVGGIAGGFSKPLRDTK 299

Query: 280 IPAGLAPFSRHFASTGNVVESVSRILRQWKWGPLAEEALGNTNYSMDAYQANQVLKQLQD 339
           +  G+AP SR F S+G+VVE+VSRILRQ  WGP AEEAL N N  MDAYQANQVLKQ+QD
Sbjct: 300 M-IGIAPVSRQFGSSGHVVENVSRILRQLSWGPAAEEALRNLNCLMDAYQANQVLKQIQD 358

Query: 340 HTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYN 399
           H VALGFF WL+RQ GFKHD HTYTTMVGILGRARQFGAINKLL +MVRDGCQPNVVTYN
Sbjct: 359 HPVALGFFYWLKRQTGFKHDGHTYTTMVGILGRARQFGAINKLLAEMVRDGCQPNVVTYN 418

Query: 400 RLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAA 459
           RLIHSYGRANYLNEA+ VF +MQ  GC+PDRVTYCTLIDIHAKAGFLDVA+ MY+KMQ A
Sbjct: 419 RLIHSYGRANYLNEAVSVFDRMQEAGCQPDRVTYCTLIDIHAKAGFLDVALHMYQKMQEA 478

Query: 460 GLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSA 519
            LSPDTFTYSVIINCLGKAGHL +AH+LFCEMV+QGC+PNLVTYNIMIALQAKARNY +A
Sbjct: 479 HLSPDTFTYSVIINCLGKAGHLTSAHKLFCEMVDQGCVPNLVTYNIMIALQAKARNYPTA 538

Query: 520 LKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDL 579
           L+LYRDMQNAGF+PDKVTYSIVMEVLGHCG+L+EAEA+F EM+RKNWVPDEPVYGLLVDL
Sbjct: 539 LELYRDMQNAGFQPDKVTYSIVMEVLGHCGHLEEAEAIFTEMKRKNWVPDEPVYGLLVDL 598

Query: 580 WGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPS 639
           WGK GNV K+WEWY+AML AGL PNVPTCNSLLSAFLRV +LSDAY+LLQ ML LGL+PS
Sbjct: 599 WGKVGNVEKSWEWYQAMLNAGLCPNVPTCNSLLSAFLRVHRLSDAYNLLQSMLRLGLQPS 658

Query: 640 LQTYTLLLSCCTEARSPYDMGFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLE 699
           LQTYTLLLSCCTEARS +DMGFC ELMAV+GHPAHMFLLSMP+ GPDGQNVRDHV  FL+
Sbjct: 659 LQTYTLLLSCCTEARSSFDMGFCGELMAVTGHPAHMFLLSMPAAGPDGQNVRDHVSKFLD 718

Query: 700 MMHSEDRESKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAVKEKGMSYWLINLH 759
           +MHSEDRESKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAV+EK   YWLINLH
Sbjct: 719 LMHSEDRESKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAVREKSSCYWLINLH 778

Query: 760 VMSDGTAVIALSRTLAWFRKQMLISGVGPSRIDIVTGWGRRSRVTGTSLVRQAVQELLHM 819
            MSDGTAV ALSRTLAWF ++ML+SG  PSRIDIVTGWGRRSRVTG SLVRQAVQELLH+
Sbjct: 779 FMSDGTAVTALSRTLAWFHREMLVSGTVPSRIDIVTGWGRRSRVTGASLVRQAVQELLHI 838

Query: 820 FSFPFFTENGNSGCFVGCGEPLNKWLLQSYVDRMHLL 856
           FSFPFFTENGNSGCFVG GEPL +WLLQSYV+RMHLL
Sbjct: 839 FSFPFFTENGNSGCFVGRGEPLGRWLLQSYVERMHLL 875


>gi|356508608|ref|XP_003523047.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g18900-like [Glycine max]
          Length = 879

 Score = 1241 bits (3210), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 603/880 (68%), Positives = 705/880 (80%), Gaps = 25/880 (2%)

Query: 1   MLRAKHITN-LSSTARSFFLNGSRCSASDGSSCTCSEDETCVSRRQ---HNAQMVY---- 52
           MLRAK I++ LSS ARS  L GSRC+A+DG+SCTC EDETCVS+RQ   +N  ++     
Sbjct: 1   MLRAKQISSTLSSNARSILLGGSRCNAADGNSCTCPEDETCVSKRQQRKNNEDLLALKPP 60

Query: 53  ------TPARAGVVVSGEAA------KAAGLQKSERVSVPSPSSLG--RSDHVSYASSVD 98
                 T    G +VSG  A      KA  + +S RV    P+S    +SD  + A  VD
Sbjct: 61  SLVSKATSQVVGTLVSGNLANGPASHKAGSVGQSGRVQQVQPTSYAPSKSDSATSACVVD 120

Query: 99  AVPKDVLTSSPI-SDQFVKAGVAAVCFLSDLVNYKLPALDGSGTANSPTNFMVDPTRPLS 157
            V   V  SS + +DQF +AG+AAV F+SD+VNYKLP  DG G  N   N+MVDP R L 
Sbjct: 121 GVQDHVAHSSSLNADQFYRAGIAAVNFISDVVNYKLPLSDGMGILNYSKNYMVDPARALP 180

Query: 158 NIKPANVKTIRRENVSKVYPNSSAESTVG-SNPSTGYHNAKDKGDNSNIARRFKRVSNAS 216
            I+ +NV+ I++EN + V+P     +  G S  +  +H AK K D SN+A+ FK V+++ 
Sbjct: 181 KIRSSNVQQIKKENFTAVHPKPPVPTHPGPSKHTNNHHGAKGKADKSNLAKGFKHVASSG 240

Query: 217 NGTSLETHNVSSDNSDRRRIVQPRSKAHSNRLNSNFKSNLQPSDAKVVECVSERFSKPSR 276
              S    N+  +N DRR + Q R++ HSN   +NF SN+Q S+ ++     E F+K +R
Sbjct: 241 TEKSGAAPNIPVNNHDRRALPQ-RTRTHSNHFVANFGSNMQSSNPQMAGPFKESFNKHTR 299

Query: 277 EMKIPAGLAPFSRHFASTGNVVESVSRILRQWKWGPLAEEALGNTNYSMDAYQANQVLKQ 336
           ++ +PAG+ P  RHF ++G+VVE V  IL+Q +WGP  E+ L N N+S+DAYQANQ+LKQ
Sbjct: 300 DLNMPAGIVPTKRHFTNSGHVVEVVKDILKQLRWGPATEKTLYNLNFSIDAYQANQILKQ 359

Query: 337 LQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVV 396
           LQDH+VA+GFF WL+RQ GF HD HTYTTMVGILGRAR+FGAINKLL+QMV+DGCQPNVV
Sbjct: 360 LQDHSVAVGFFCWLKRQPGFWHDGHTYTTMVGILGRAREFGAINKLLEQMVKDGCQPNVV 419

Query: 397 TYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKM 456
           TYNRLIHSYGRANYL EAL+VF QMQ +GCEPDRVTYCTLIDIHAKAGFLDVAM MY++M
Sbjct: 420 TYNRLIHSYGRANYLREALNVFNQMQEMGCEPDRVTYCTLIDIHAKAGFLDVAMSMYERM 479

Query: 457 QAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNY 516
           Q  GLSPDTFTYSV+INCLGK+G+L AAH+LFCEMV+QGC+PN+VTYNI+IALQAKARNY
Sbjct: 480 QEVGLSPDTFTYSVMINCLGKSGNLSAAHRLFCEMVDQGCVPNIVTYNILIALQAKARNY 539

Query: 517 QSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLL 576
           Q+AL+LYRDMQNAGF+PDKVTYSIVMEVLGHCGYL+EAEAVF EMR+ +WVPDEPVYGLL
Sbjct: 540 QTALELYRDMQNAGFKPDKVTYSIVMEVLGHCGYLEEAEAVFFEMRQNHWVPDEPVYGLL 599

Query: 577 VDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGL 636
           VDLWGKAGNV KAWEWY  ML+AGL PNVPTCNSLLSAFLRV +L DAY+LLQ M+ LGL
Sbjct: 600 VDLWGKAGNVEKAWEWYHTMLRAGLLPNVPTCNSLLSAFLRVHRLPDAYNLLQNMVTLGL 659

Query: 637 KPSLQTYTLLLSCCTEARSPYDMGFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGS 696
            PSLQTYTLLLSCCTEA+SPYDMGFC ELMAVSGHPAH FL SMP+ GPDGQNVRDHV  
Sbjct: 660 NPSLQTYTLLLSCCTEAQSPYDMGFCCELMAVSGHPAHAFLQSMPAAGPDGQNVRDHVSK 719

Query: 697 FLEMMHSEDRESKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAVKEKGMSYWLI 756
           FL++MHSEDRE KRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAVKEK   YWLI
Sbjct: 720 FLDLMHSEDREGKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAVKEKSTCYWLI 779

Query: 757 NLHVMSDGTAVIALSRTLAWFRKQMLISGVGPSRIDIVTGWGRRSRVTGTSLVRQAVQEL 816
           NLHVMSDGTAV ALSRTLAWFR+QML SGVGP+RIDIVTGWGRRSRVTG+SLVRQAVQEL
Sbjct: 780 NLHVMSDGTAVTALSRTLAWFRRQMLASGVGPNRIDIVTGWGRRSRVTGSSLVRQAVQEL 839

Query: 817 LHMFSFPFFTENGNSGCFVGCGEPLNKWLLQSYVDRMHLL 856
           LH+FSFPFFTEN NSGCFVGCGEPL++WL+ SYV+RMHLL
Sbjct: 840 LHVFSFPFFTENSNSGCFVGCGEPLSQWLVHSYVERMHLL 879


>gi|356516744|ref|XP_003527053.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g18900-like [Glycine max]
          Length = 882

 Score = 1226 bits (3173), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 598/880 (67%), Positives = 702/880 (79%), Gaps = 25/880 (2%)

Query: 1   MLRAKHITN-LSSTARSFFLNGSRCSASDGSSCTCSEDETCVSRRQH--NAQMVYTPAR- 56
           MLRAK I++ LSS ARS  L+GSRC+A+DG+SC C EDETCVS+RQ   N + +  P   
Sbjct: 4   MLRAKAISSTLSSNARSILLSGSRCNAADGNSCNCPEDETCVSKRQQRKNNEDLLAPKPP 63

Query: 57  ----------AGVVVSGEAAKA------AGLQKSERVSVPSPSSLG--RSDHVSYASSVD 98
                      G +VSG  A          + +S  V    P+S    +S+ V+ A  VD
Sbjct: 64  SLVSKATSQVVGTLVSGNLANGPASHNVGSVGQSGCVQKVRPTSYAPSKSESVTSACVVD 123

Query: 99  AVPKDVLTSSPI-SDQFVKAGVAAVCFLSDLVNYKLPALDGSGTANSPTNFMVDPTRPLS 157
            V + V  SS + +DQF +AG+AAV F+SD+VNYKLP  DG G  N   N MVDP R L 
Sbjct: 124 GVQEHVAHSSSLNADQFYRAGIAAVNFISDVVNYKLPLSDGMGILNYSKNCMVDPARALP 183

Query: 158 NIKPANVKTIRRENVSKVYPNSSAESTVG-SNPSTGYHNAKDKGDNSNIARRFKRVSNAS 216
            I+ +NV+ IR EN + V+P     +  G S  +   H AK K + SN+A+ FK V+ + 
Sbjct: 184 KIRSSNVQQIRTENFTSVHPKPPVPAHPGPSKHTNNNHGAKGKANKSNLAKGFKYVAASG 243

Query: 217 NGTSLETHNVSSDNSDRRRIVQPRSKAHSNRLNSNFKSNLQPSDAKVVECVSERFSKPSR 276
              S    N+  +N DRR + Q R++ +SN   +NF SN+Q S+ ++     E F+K +R
Sbjct: 244 TEKSGAAPNIPVNNHDRRALPQ-RTRTNSNHFVTNFGSNMQSSNPQMARPFKESFNKHTR 302

Query: 277 EMKIPAGLAPFSRHFASTGNVVESVSRILRQWKWGPLAEEALGNTNYSMDAYQANQVLKQ 336
           ++ +PAG+AP  RHF ++G+VVE V  IL+Q +WGP  E+AL N N+S+DAYQANQ+LKQ
Sbjct: 303 DLNMPAGIAPTRRHFTNSGHVVEGVKDILKQLRWGPATEKALYNLNFSIDAYQANQILKQ 362

Query: 337 LQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVV 396
           LQDH+VAL FF WL+RQ GF HD HTYTTMVGILGRAR+FGAINKLL+QMV+DGCQPNVV
Sbjct: 363 LQDHSVALSFFYWLKRQPGFWHDGHTYTTMVGILGRAREFGAINKLLEQMVKDGCQPNVV 422

Query: 397 TYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKM 456
           TYNRLIHSYGRANYL EAL+VF QMQ +GCEPDRVTYCTLIDIHAKAGFLDVAM MY++M
Sbjct: 423 TYNRLIHSYGRANYLGEALNVFNQMQEMGCEPDRVTYCTLIDIHAKAGFLDVAMSMYERM 482

Query: 457 QAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNY 516
           Q  GLSPDTFTYSV+INCLGK+G+L AAH+LFCEMV+QGC+PN+VTYNI+IALQAKARNY
Sbjct: 483 QEVGLSPDTFTYSVMINCLGKSGNLSAAHRLFCEMVDQGCVPNIVTYNILIALQAKARNY 542

Query: 517 QSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLL 576
           Q+ALKLYRDMQNAGF+PDKVTYSIVMEVLG+CGYL+EAEAVF EM++ NWVPDEPVYGLL
Sbjct: 543 QTALKLYRDMQNAGFKPDKVTYSIVMEVLGYCGYLEEAEAVFFEMKQNNWVPDEPVYGLL 602

Query: 577 VDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGL 636
           +DLWGKAGNV KAWEWY AML+AGL PNVPTCNSLLSAFLRV +L DAY+LLQ M+ LGL
Sbjct: 603 IDLWGKAGNVEKAWEWYHAMLRAGLLPNVPTCNSLLSAFLRVHRLPDAYNLLQNMVTLGL 662

Query: 637 KPSLQTYTLLLSCCTEARSPYDMGFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGS 696
            PSLQTYTLLLSCCTEA+SPYDMGFC ELMAVSGHPAH FL SMP+ GPDGQNVRDHV  
Sbjct: 663 NPSLQTYTLLLSCCTEAQSPYDMGFCCELMAVSGHPAHAFLQSMPAAGPDGQNVRDHVSK 722

Query: 697 FLEMMHSEDRESKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAVKEKGMSYWLI 756
           FL++MHSEDRE KRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDA++EK   YWLI
Sbjct: 723 FLDLMHSEDREGKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAIREKSTCYWLI 782

Query: 757 NLHVMSDGTAVIALSRTLAWFRKQMLISGVGPSRIDIVTGWGRRSRVTGTSLVRQAVQEL 816
           NLHVMSDGTAV ALSRTLAWFR+QML SGVGP+RIDI+TGWGRRSRVTG+SLVRQAVQEL
Sbjct: 783 NLHVMSDGTAVTALSRTLAWFRRQMLASGVGPNRIDIITGWGRRSRVTGSSLVRQAVQEL 842

Query: 817 LHMFSFPFFTENGNSGCFVGCGEPLNKWLLQSYVDRMHLL 856
           LH+FSFPFFTENGNSGCFVGCGEPL++WL+ SYV+RMHLL
Sbjct: 843 LHVFSFPFFTENGNSGCFVGCGEPLSQWLVHSYVERMHLL 882


>gi|15221377|ref|NP_177613.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75207514|sp|Q9SSF9.1|PP123_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g74750
 gi|5882748|gb|AAD55301.1|AC008263_32 Contains 2 PF|01535 DUF domains [Arabidopsis thaliana]
 gi|332197508|gb|AEE35629.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 855

 Score = 1196 bits (3093), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 589/877 (67%), Positives = 689/877 (78%), Gaps = 43/877 (4%)

Query: 1   MLRAKHITNLSSTARSFFLNGSRCSASDGSSCTCSEDETCVSRRQH-NAQMVYTPARAGV 59
           M+RAKHI+NLSS+ARSFFL+GSR SA+DG+SCTC+EDE+ VS+RQ    ++V T  RA  
Sbjct: 1   MIRAKHISNLSSSARSFFLSGSRPSAADGNSCTCAEDESGVSKRQQIRTEVVQTGKRASN 60

Query: 60  VVSGEAAKAAGLQKSERVSVP-----------------SPSSLGRSDHVSYASSVDAVPK 102
           + +G A     ++  + + VP                 SP+  G++D V++AS++  + +
Sbjct: 61  LAAGLAGSILPVEAGKPLVVPKTVEHFTRPSLLPQHVSSPALPGKADSVNHASAI--IKE 118

Query: 103 DVLTSSPISDQFVKAGVAAVCFLSDLVNYKLPALDGSGTANSPTNFMVDPTRPLSNIKPA 162
           DV    PI DQ  KAG+  V  LSD+ NYK+P  DG+     P + MVDPTRP+S +K +
Sbjct: 119 DV--GVPIGDQIFKAGIGNVNLLSDIANYKIPLSDGTEVVGLPKSCMVDPTRPISGVKSS 176

Query: 163 NVKTIRRENVSKVYPNSSAESTVGSNPSTGYHNAKDKGDNSNIARRFKRVSNASNGTSLE 222
           NVK IRRE+++KVYP S+    + S+P T                  K+ SN   G S E
Sbjct: 177 NVKVIRREHLAKVYPRSADRVPINSSPGT------------------KQASNDVAGKSFE 218

Query: 223 THNVSSDN-SDRRRIVQPRSKAHSNRLNSN-FKSNLQPSDAKVVECVSERFSKPSREM-K 279
            H++ S+N S +R+I+  R    S R  S     ++  SD + +    E F KPSREM K
Sbjct: 219 AHDLLSNNVSGKRKIMPQRPYTDSTRYASGGCDYSVHSSDDRTIISSVEGFGKPSREMMK 278

Query: 280 IPAGLAPFSRHFASTGNVVESVSRILRQWKWGPLAEEALGNTNYSMDAYQANQVLKQLQD 339
           +    AP  R   + G VVE+VS ILR++KWG  AEEAL N  + MDAYQANQVLKQ+ +
Sbjct: 279 VTPRTAPTPRQHCNPGYVVENVSSILRRFKWGHAAEEALHNFGFRMDAYQANQVLKQMDN 338

Query: 340 HTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYN 399
           +  ALGFF WL+RQ GFKHD HTYTTMVG LGRA+QFG INKLLD+MVRDGC+PN VTYN
Sbjct: 339 YANALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGEINKLLDEMVRDGCKPNTVTYN 398

Query: 400 RLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAA 459
           RLIHSYGRANYL EA++VF QMQ  GCEPDRVTYCTLIDIHAKAGFLD+AMDMY++MQ A
Sbjct: 399 RLIHSYGRANYLKEAMNVFNQMQEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQEA 458

Query: 460 GLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSA 519
           GLSPDTFTYSVIINCLGKAGHL AAH+LFCEMV QGC PNLVT+NIMIAL AKARNY++A
Sbjct: 459 GLSPDTFTYSVIINCLGKAGHLPAAHRLFCEMVGQGCTPNLVTFNIMIALHAKARNYETA 518

Query: 520 LKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDL 579
           LKLYRDMQNAGF+PDKVTYSIVMEVLGHCG+L+EAE VFAEM+RKNWVPDEPVYGLLVDL
Sbjct: 519 LKLYRDMQNAGFQPDKVTYSIVMEVLGHCGFLEEAEGVFAEMQRKNWVPDEPVYGLLVDL 578

Query: 580 WGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPS 639
           WGKAGNV KAW+WY+AMLQAGLRPNVPTCNSLLS FLRV ++S+AY+LLQ ML LGL PS
Sbjct: 579 WGKAGNVDKAWQWYQAMLQAGLRPNVPTCNSLLSTFLRVHRMSEAYNLLQSMLALGLHPS 638

Query: 640 LQTYTLLLSCCTEARSPYDMGFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLE 699
           LQTYTLLLSCCT+ARS +DMGFC +LMAVSGHPAHMFLL MP  GPDGQ VRDHV +FL+
Sbjct: 639 LQTYTLLLSCCTDARSNFDMGFCGQLMAVSGHPAHMFLLKMPPAGPDGQKVRDHVSNFLD 698

Query: 700 MMHSEDRESKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAVKEKGMSYWLINLH 759
            MHSEDRESKRGL+DAVVDFLHKSGLKEEAGSVWEVAA KNVYPDA++EK  SYWLINLH
Sbjct: 699 FMHSEDRESKRGLMDAVVDFLHKSGLKEEAGSVWEVAAGKNVYPDALREKSYSYWLINLH 758

Query: 760 VMSDGTAVIALSRTLAWFRKQMLISGVGPSRIDIVTGWGRRSRVTGTSLVRQAVQELLHM 819
           VMS+GTAVIALSRTLAWFRKQML+SG  PSRIDIVTGWGRRSRVTGTS+VRQAV+ELL++
Sbjct: 759 VMSEGTAVIALSRTLAWFRKQMLVSGDCPSRIDIVTGWGRRSRVTGTSMVRQAVEELLNI 818

Query: 820 FSFPFFTENGNSGCFVGCGEPLNKWLLQSYVDRMHLL 856
           F+FPFFTENGNSGCFVG GEPL  WLL+SYV+RMHLL
Sbjct: 819 FNFPFFTENGNSGCFVGSGEPLKNWLLESYVERMHLL 855


>gi|15221893|ref|NP_173324.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|42571539|ref|NP_973860.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75151479|sp|Q8GYP6.1|PPR49_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g18900
 gi|26450017|dbj|BAC42129.1| unknown protein [Arabidopsis thaliana]
 gi|28827402|gb|AAO50545.1| unknown protein [Arabidopsis thaliana]
 gi|332191657|gb|AEE29778.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|332191658|gb|AEE29779.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 860

 Score = 1183 bits (3061), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 587/884 (66%), Positives = 692/884 (78%), Gaps = 52/884 (5%)

Query: 1   MLRAKHITNLSSTARSFFLNGSRCSASDGSSCTCSEDETCVSRRQH-----------NAQ 49
           M+RAKHI+NLSSTARSFFLNGSR S +DG+SC  S+DE CVS+RQ             + 
Sbjct: 1   MIRAKHISNLSSTARSFFLNGSRTSVTDGNSCVYSDDENCVSKRQQLRKEAGQTEKRPSS 60

Query: 50  MVYTPARAGVVVSGEAAKAAGLQKSERVSVPS---------PSSLGRSDHVSYASSVDAV 100
           ++  P+  G ++ GE  K    +K +    PS         P+   +S  V+YAS+V  V
Sbjct: 61  ILPKPSVVGCILPGEVTKPVVPKKVDDFGRPSLLPQHVSSSPALPLKSHSVNYASTV--V 118

Query: 101 PKDV---LTSSPISDQFVKAGVAAVCFLSDLVNYKLPALDGSGTA-NSPTNFMVDPTRPL 156
            ++V    +S PI DQ  KAG+ AV FLSDL N K+P+ DG   A   P + MVDPTRP+
Sbjct: 119 REEVEGKASSEPIGDQIFKAGIVAVNFLSDLSNCKIPSYDGGSDAFGLPKSCMVDPTRPI 178

Query: 157 SNIKPANVKTIRRENVSKVYPNSSA-ESTVGS--NPSTGYHNAKDKGDNSNIARRFKRVS 213
           S++K +NVK IRRE+ +K+YP S+A ES+VG+  NPS+ +  AK+  + +   + F++VS
Sbjct: 179 SSVKSSNVKAIRREHFAKIYPRSAAKESSVGTTRNPSSNFRGAKE-AERTGFVKGFRQVS 237

Query: 214 NASNGTSLETHNVSSDNSDRRRIVQPRSKAHSNRLNSNFKSNLQPSDAKVVECVSERFSK 273
           N+  G SL T N   +   +R  V  R    SNR                   V   FS 
Sbjct: 238 NSVVGKSLPTTN---NTYGKRTSVLQRPHIDSNRF------------------VPSGFSN 276

Query: 274 PSREM-KIPAGLAPFSRHFASTGNVVESVSRILRQWKWGPLAEEALGNTNYSMDAYQANQ 332
            S EM K P+G A  SR + ++G++VE+VS +LR+++WGP AEEAL N    +DAYQANQ
Sbjct: 277 SSVEMMKGPSGTALTSRQYCNSGHIVENVSSVLRRFRWGPAAEEALQNLGLRIDAYQANQ 336

Query: 333 VLKQLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQ 392
           VLKQ+ D+  ALGFF WL+RQ GFKHD HTYTTMVG LGRA+QFGAINKLLD+MVRDGCQ
Sbjct: 337 VLKQMNDYGNALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQ 396

Query: 393 PNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDM 452
           PN VTYNRLIHSYGRANYLNEA++VF QMQ  GC+PDRVTYCTLIDIHAKAGFLD+AMDM
Sbjct: 397 PNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDM 456

Query: 453 YKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAK 512
           Y++MQA GLSPDTFTYSVIINCLGKAGHL AAH+LFCEMV+QGC PNLVTYNIM+ L AK
Sbjct: 457 YQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAK 516

Query: 513 ARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPV 572
           ARNYQ+ALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYL+EAEAVF EM++KNW+PDEPV
Sbjct: 517 ARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPV 576

Query: 573 YGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGML 632
           YGLLVDLWGKAGNV KAW+WY+AML AGLRPNVPTCNSLLS FLRV ++++AY LLQ ML
Sbjct: 577 YGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNML 636

Query: 633 NLGLKPSLQTYTLLLSCCTEARSPYDMGFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRD 692
            LGL+PSLQTYTLLLSCCT+ RS  DMGFC +LMA +GHPAHMFLL MP+ GPDG+NVR+
Sbjct: 637 ALGLRPSLQTYTLLLSCCTDGRSKLDMGFCGQLMASTGHPAHMFLLKMPAAGPDGENVRN 696

Query: 693 HVGSFLEMMHSEDRESKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAVKEKGMS 752
           H  +FL++MHSEDRESKRGLVDAVVDFLHKSG KEEAGSVWEVAAQKNV+PDA++EK  S
Sbjct: 697 HANNFLDLMHSEDRESKRGLVDAVVDFLHKSGQKEEAGSVWEVAAQKNVFPDALREKSCS 756

Query: 753 YWLINLHVMSDGTAVIALSRTLAWFRKQMLISGVGPSRIDIVTGWGRRSRVTGTSLVRQA 812
           YWLINLHVMS+GTAV ALSRTLAWFRKQML SG  PSRIDIVTGWGRRSRVTGTS+VRQA
Sbjct: 757 YWLINLHVMSEGTAVTALSRTLAWFRKQMLASGTCPSRIDIVTGWGRRSRVTGTSMVRQA 816

Query: 813 VQELLHMFSFPFFTENGNSGCFVGCGEPLNKWLLQSYVDRMHLL 856
           V+ELL++F  PFFTE+GNSGCFVG GEPLN+WLLQS+V+RMHLL
Sbjct: 817 VEELLNIFGSPFFTESGNSGCFVGSGEPLNRWLLQSHVERMHLL 860


>gi|449440748|ref|XP_004138146.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g18900-like [Cucumis sativus]
          Length = 874

 Score = 1183 bits (3061), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 579/879 (65%), Positives = 690/879 (78%), Gaps = 28/879 (3%)

Query: 1   MLRAKHITNLSSTARSFFLNGSRCSASDGSSCTCSEDETCVSRRQHNAQMVYTPA----- 55
           MLRAK I +LS++ARSFFL+GSRC+A DG+SCTC EDETCVS RQ NA+    P+     
Sbjct: 1   MLRAKQIGSLSNSARSFFLSGSRCNA-DGASCTCPEDETCVSERQ-NARNETLPSQKPST 58

Query: 56  -------RAGVVVSGEAAKAAGLQKSERVSV---------PSPSSLGRSDHVSYASSVDA 99
                  R G +++ EAAK     K++ V +           P+    ++ V YAS ++ 
Sbjct: 59  LVANSSPRVGPLIAEEAAKVIVSHKTDNVDLSVSIRQVANTGPNHQRGAECVRYASGLNT 118

Query: 100 VPKDVLTSSPISDQFVKAGVAAVCFLSDLVNYKLPALDGSGTANSPTNFMVDPTRPLSNI 159
           V     TS  I+DQ VKAG+ AV   SD VN+K+P+ D  GT +S  N MVDP R ++++
Sbjct: 119 VLDGECTSPRIADQVVKAGIMAVNLFSDFVNFKIPSSDYGGTFSSSKNCMVDPARSITSV 178

Query: 160 KPANVKTIRRENVSKVYPNSSAESTVGSNP-STGYHNAKDKGDNSNIARRFKR-VSNASN 217
           KP+ +K +RREN+S+V+   S E  V S P S+  H +  K   S+  +  ++ VS A  
Sbjct: 179 KPSKIKHLRRENISRVHSRPSVEIPVDSKPQSSSNHGSNCKPAQSSYVKGSRQEVSEART 238

Query: 218 GTSLETHNVSSDNSDRRRIVQPRSKAHSNRLNSNFKSNLQPSDAKVVECVSERFSKPSRE 277
              +   N+SSD  D+R + Q R++ HSN   S+F S  Q + +      S+ F K    
Sbjct: 239 QKLVVFQNISSDKCDKRNLPQ-RTRVHSNSFTSHFHSIAQTTGSDFTNS-SKNFKKFPDN 296

Query: 278 MKIPAGLAPFSRHFASTGNVVESVSRILRQWKWGPLAEEALGNTNYSMDAYQANQVLKQL 337
           +K P G+AP +  F +  NVVESVS IL+Q KWGP AEEA+G  N S+DAYQANQ+LK++
Sbjct: 297 LKSPTGMAPITSSFLNAPNVVESVSCILQQLKWGPAAEEAIGKLNCSIDAYQANQILKRV 356

Query: 338 QDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVT 397
            DH VALGFF WL+R   F+HD HTYTTM+G+LGRA+QF AINKLLDQM++DGCQPNVVT
Sbjct: 357 DDHAVALGFFYWLKRLPRFRHDGHTYTTMIGLLGRAKQFAAINKLLDQMIKDGCQPNVVT 416

Query: 398 YNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQ 457
           YNR+IHSYGRANYL +A++VFKQMQ  GCEPDRVTYCTLIDIHAK+GFLDVAM MY+KMQ
Sbjct: 417 YNRIIHSYGRANYLQDAVNVFKQMQEAGCEPDRVTYCTLIDIHAKSGFLDVAMGMYEKMQ 476

Query: 458 AAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQ 517
            AGL+PDTFTYSV+INCLGKAGHL AAH+LFC MV++GC+PNLVTYNIMIALQAKARNY+
Sbjct: 477 DAGLTPDTFTYSVMINCLGKAGHLNAAHRLFCRMVDEGCVPNLVTYNIMIALQAKARNYE 536

Query: 518 SALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLV 577
            ALKLYRDMQ +GFEPDKVTY IVMEVLGHCG+L+EAE +F EM++KNWVPDEPVYGLLV
Sbjct: 537 IALKLYRDMQQSGFEPDKVTYCIVMEVLGHCGFLEEAEGIFIEMQKKNWVPDEPVYGLLV 596

Query: 578 DLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLK 637
           DLWGK+GNV+KAWEWY AML+AGL+PNVPTCNSLLSAFLRV QLSDAY LLQ ML  GLK
Sbjct: 597 DLWGKSGNVQKAWEWYHAMLKAGLKPNVPTCNSLLSAFLRVHQLSDAYQLLQSMLTFGLK 656

Query: 638 PSLQTYTLLLSCCTEARSPYDMGFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSF 697
           PSLQTYTLLLSCCT+A++  DMGFC ELM V+GHPAH FL+S+PS GP+GQNVRDH+  F
Sbjct: 657 PSLQTYTLLLSCCTDAQT-NDMGFCCELMQVTGHPAHTFLVSLPSAGPNGQNVRDHMSKF 715

Query: 698 LEMMHSEDRESKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAVKEKGMSYWLIN 757
           L++MHSEDRESKRGLVDAVVDFLHKSGLKEEAG VWE A QKNVYPDAVKEK   YWLIN
Sbjct: 716 LDLMHSEDRESKRGLVDAVVDFLHKSGLKEEAGCVWEAAMQKNVYPDAVKEKSSCYWLIN 775

Query: 758 LHVMSDGTAVIALSRTLAWFRKQMLISGVGPSRIDIVTGWGRRSRVTGTSLVRQAVQELL 817
           LHVMSDGTAV ALSRTLAWFR+Q+L+SGVGPSRIDIVTGWGRRS+VTG+SLVRQAVQ+LL
Sbjct: 776 LHVMSDGTAVTALSRTLAWFRQQLLLSGVGPSRIDIVTGWGRRSKVTGSSLVRQAVQDLL 835

Query: 818 HMFSFPFFTENGNSGCFVGCGEPLNKWLLQSYVDRMHLL 856
            +FSFPFFTENGNSGCFVGCGEPL++WL QSYV+RMHLL
Sbjct: 836 SIFSFPFFTENGNSGCFVGCGEPLSRWLHQSYVERMHLL 874


>gi|8778269|gb|AAF79278.1|AC068602_1 F14D16.2 [Arabidopsis thaliana]
          Length = 977

 Score = 1182 bits (3059), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 587/884 (66%), Positives = 692/884 (78%), Gaps = 52/884 (5%)

Query: 1   MLRAKHITNLSSTARSFFLNGSRCSASDGSSCTCSEDETCVSRRQH-----------NAQ 49
           M+RAKHI+NLSSTARSFFLNGSR S +DG+SC  S+DE CVS+RQ             + 
Sbjct: 118 MIRAKHISNLSSTARSFFLNGSRTSVTDGNSCVYSDDENCVSKRQQLRKEAGQTEKRPSS 177

Query: 50  MVYTPARAGVVVSGEAAKAAGLQKSERVSVPS---------PSSLGRSDHVSYASSVDAV 100
           ++  P+  G ++ GE  K    +K +    PS         P+   +S  V+YAS+V  V
Sbjct: 178 ILPKPSVVGCILPGEVTKPVVPKKVDDFGRPSLLPQHVSSSPALPLKSHSVNYASTV--V 235

Query: 101 PKDV---LTSSPISDQFVKAGVAAVCFLSDLVNYKLPALDGSGTA-NSPTNFMVDPTRPL 156
            ++V    +S PI DQ  KAG+ AV FLSDL N K+P+ DG   A   P + MVDPTRP+
Sbjct: 236 REEVEGKASSEPIGDQIFKAGIVAVNFLSDLSNCKIPSYDGGSDAFGLPKSCMVDPTRPI 295

Query: 157 SNIKPANVKTIRRENVSKVYPNSSA-ESTVGS--NPSTGYHNAKDKGDNSNIARRFKRVS 213
           S++K +NVK IRRE+ +K+YP S+A ES+VG+  NPS+ +  AK+  + +   + F++VS
Sbjct: 296 SSVKSSNVKAIRREHFAKIYPRSAAKESSVGTTRNPSSNFRGAKE-AERTGFVKGFRQVS 354

Query: 214 NASNGTSLETHNVSSDNSDRRRIVQPRSKAHSNRLNSNFKSNLQPSDAKVVECVSERFSK 273
           N+  G SL T N   +   +R  V  R    SNR                   V   FS 
Sbjct: 355 NSVVGKSLPTTN---NTYGKRTSVLQRPHIDSNRF------------------VPSGFSN 393

Query: 274 PSREM-KIPAGLAPFSRHFASTGNVVESVSRILRQWKWGPLAEEALGNTNYSMDAYQANQ 332
            S EM K P+G A  SR + ++G++VE+VS +LR+++WGP AEEAL N    +DAYQANQ
Sbjct: 394 SSVEMMKGPSGTALTSRQYCNSGHIVENVSSVLRRFRWGPAAEEALQNLGLRIDAYQANQ 453

Query: 333 VLKQLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQ 392
           VLKQ+ D+  ALGFF WL+RQ GFKHD HTYTTMVG LGRA+QFGAINKLLD+MVRDGCQ
Sbjct: 454 VLKQMNDYGNALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQ 513

Query: 393 PNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDM 452
           PN VTYNRLIHSYGRANYLNEA++VF QMQ  GC+PDRVTYCTLIDIHAKAGFLD+AMDM
Sbjct: 514 PNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDM 573

Query: 453 YKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAK 512
           Y++MQA GLSPDTFTYSVIINCLGKAGHL AAH+LFCEMV+QGC PNLVTYNIM+ L AK
Sbjct: 574 YQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAK 633

Query: 513 ARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPV 572
           ARNYQ+ALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYL+EAEAVF EM++KNW+PDEPV
Sbjct: 634 ARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPV 693

Query: 573 YGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGML 632
           YGLLVDLWGKAGNV KAW+WY+AML AGLRPNVPTCNSLLS FLRV ++++AY LLQ ML
Sbjct: 694 YGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNML 753

Query: 633 NLGLKPSLQTYTLLLSCCTEARSPYDMGFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRD 692
            LGL+PSLQTYTLLLSCCT+ RS  DMGFC +LMA +GHPAHMFLL MP+ GPDG+NVR+
Sbjct: 754 ALGLRPSLQTYTLLLSCCTDGRSKLDMGFCGQLMASTGHPAHMFLLKMPAAGPDGENVRN 813

Query: 693 HVGSFLEMMHSEDRESKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAVKEKGMS 752
           H  +FL++MHSEDRESKRGLVDAVVDFLHKSG KEEAGSVWEVAAQKNV+PDA++EK  S
Sbjct: 814 HANNFLDLMHSEDRESKRGLVDAVVDFLHKSGQKEEAGSVWEVAAQKNVFPDALREKSCS 873

Query: 753 YWLINLHVMSDGTAVIALSRTLAWFRKQMLISGVGPSRIDIVTGWGRRSRVTGTSLVRQA 812
           YWLINLHVMS+GTAV ALSRTLAWFRKQML SG  PSRIDIVTGWGRRSRVTGTS+VRQA
Sbjct: 874 YWLINLHVMSEGTAVTALSRTLAWFRKQMLASGTCPSRIDIVTGWGRRSRVTGTSMVRQA 933

Query: 813 VQELLHMFSFPFFTENGNSGCFVGCGEPLNKWLLQSYVDRMHLL 856
           V+ELL++F  PFFTE+GNSGCFVG GEPLN+WLLQS+V+RMHLL
Sbjct: 934 VEELLNIFGSPFFTESGNSGCFVGSGEPLNRWLLQSHVERMHLL 977


>gi|297839351|ref|XP_002887557.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297333398|gb|EFH63816.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 845

 Score = 1181 bits (3056), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 586/879 (66%), Positives = 686/879 (78%), Gaps = 57/879 (6%)

Query: 1   MLRAKHITNLSSTARSFFLNGSRCSASDGSSCTCSEDETCVSRRQH-NAQMVYTPAR--- 56
           M+RAKHI+NLSS+ARSFFL+G+R SA DG+SCTC+EDE+CVS+RQ    ++V T  +   
Sbjct: 1   MIRAKHISNLSSSARSFFLSGTRPSAGDGNSCTCAEDESCVSKRQQIRTEVVQTGKKVSN 60

Query: 57  -----AGVVVSGEAAKAAGLQKS-ERVSVP--------SPSSLGRSDHVSYASSVDAVPK 102
                AG ++  EA K   + KS E  + P        SP+  G++D         A+ K
Sbjct: 61  LAAGLAGNILPVEACKPPVVPKSVEHFTRPLLLPQHVSSPALPGKTD--------SAIIK 112

Query: 103 DVLTSSPISDQFVKAG--VAAVCFLSDLVNYKLPALDGSGTANSPTNFMVDPTRPLSNIK 160
           D +  +PI DQ  KAG  +  V  LSD+ NYK+P  DG+     P + MVDPTRP+S++K
Sbjct: 113 DDV-GAPIGDQIFKAGNGIGTVNLLSDVANYKIPLSDGTEVVGLPKSCMVDPTRPISSVK 171

Query: 161 PANVKTIRRENVSKVYPNSSAESTVGSNPSTGYHNAKDKGDNSNIARRFKRVSNASNGTS 220
            +NVK IRRE+++KVYP S+    + S+PS                             S
Sbjct: 172 SSNVKVIRREHLAKVYPRSADRVAINSSPSI-------------------------KQAS 206

Query: 221 LETHNVSSDNSDRRRIVQP-RSKAHSNRLNSN-FKSNLQPSDAKVVECVSERFSKPSREM 278
            E H++ S+ +  +R   P R+   S R  S     N+  SD + +    E F KPSREM
Sbjct: 207 FEAHDLLSNTASGKRKSMPQRTYIDSTRYASGGCDYNVHSSDDRTIISSVEGFGKPSREM 266

Query: 279 -KIPAGLAPFSRHFASTGNVVESVSRILRQWKWGPLAEEALGNTNYSMDAYQANQVLKQL 337
            ++  G AP  R + + G VVE+VS ILR++KWG  AEEAL N  + MDAYQANQVLKQ+
Sbjct: 267 MRVTPGTAPTPRQYCNPGYVVENVSGILRRFKWGHAAEEALHNFGFRMDAYQANQVLKQM 326

Query: 338 QDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVT 397
            ++  ALGFF WL+RQ GFKHD HTYTTMVG LGRA+QFGAIN+LLD+MV+DGC+PN VT
Sbjct: 327 DNYANALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGAINRLLDEMVKDGCKPNTVT 386

Query: 398 YNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQ 457
           YNRLIHSYGRANYLNEA++VFKQMQ  GCEPDRVTYCTLIDIHAKAGFLD+AMDMY++MQ
Sbjct: 387 YNRLIHSYGRANYLNEAMNVFKQMQEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQ 446

Query: 458 AAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQ 517
           AAGLSPDTFTYSVIINCLGKAGHL AAH+LFCEMV QGC PNLVT+NIMIAL AKARNY+
Sbjct: 447 AAGLSPDTFTYSVIINCLGKAGHLPAAHRLFCEMVGQGCTPNLVTFNIMIALHAKARNYE 506

Query: 518 SALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLV 577
           +ALKLYRDMQNAGF+PDKVTYSIVMEVLGHCG+L+EAE VFAEM+RKNWVPDEPVYGLLV
Sbjct: 507 TALKLYRDMQNAGFQPDKVTYSIVMEVLGHCGFLEEAEGVFAEMQRKNWVPDEPVYGLLV 566

Query: 578 DLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLK 637
           DLWGKAGNV KAW+WY+ ML AGLRPNVPTCNSLLS FLRV ++S+AY+LLQ ML LGL 
Sbjct: 567 DLWGKAGNVEKAWQWYQEMLHAGLRPNVPTCNSLLSTFLRVHRMSEAYNLLQSMLALGLH 626

Query: 638 PSLQTYTLLLSCCTEARSPYDMGFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSF 697
           PSLQTYTLLLSCCT+ARS +DMGFC +LMAVSGHPAHMFLL MP  GPDGQ VRDHV +F
Sbjct: 627 PSLQTYTLLLSCCTDARSNFDMGFCGQLMAVSGHPAHMFLLKMPPAGPDGQKVRDHVSNF 686

Query: 698 LEMMHSEDRESKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAVKEKGMSYWLIN 757
           L+ MHSEDRESKRGL+DAVVDFLHKSGLKEEAGSVWEVAA KNVYPDA++EK  SYWLIN
Sbjct: 687 LDFMHSEDRESKRGLMDAVVDFLHKSGLKEEAGSVWEVAAVKNVYPDALREKSCSYWLIN 746

Query: 758 LHVMSDGTAVIALSRTLAWFRKQMLISGVGPSRIDIVTGWGRRSRVTGTSLVRQAVQELL 817
           LHVMS+GTAVIALSRTLAWFRKQML++G  PSRIDIVTGWGRRSRVTGTS+VRQAV+ELL
Sbjct: 747 LHVMSEGTAVIALSRTLAWFRKQMLVTGDCPSRIDIVTGWGRRSRVTGTSMVRQAVEELL 806

Query: 818 HMFSFPFFTENGNSGCFVGCGEPLNKWLLQSYVDRMHLL 856
           ++F+FPFFTENGNSGCFVGCGEPL KWLL+SYV+RMHLL
Sbjct: 807 NIFNFPFFTENGNSGCFVGCGEPLKKWLLESYVERMHLL 845


>gi|449477323|ref|XP_004154991.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g18900-like [Cucumis sativus]
          Length = 874

 Score = 1181 bits (3056), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 578/879 (65%), Positives = 689/879 (78%), Gaps = 28/879 (3%)

Query: 1   MLRAKHITNLSSTARSFFLNGSRCSASDGSSCTCSEDETCVSRRQHNAQMVYTPA----- 55
           MLRAK I +LS++ARSFF +GSRC+A DG+SCTC EDETCVS RQ NA+    P+     
Sbjct: 1   MLRAKQIGSLSNSARSFFXSGSRCNA-DGASCTCPEDETCVSERQ-NARNETLPSQKPST 58

Query: 56  -------RAGVVVSGEAAKAAGLQKSERVSV---------PSPSSLGRSDHVSYASSVDA 99
                  R G +++ EAAK     K++ V +           P+    ++ V YAS ++ 
Sbjct: 59  LVANSSPRVGPLIAEEAAKVIVSHKTDNVDLSVSIRQVANTGPNHQRGAECVRYASGLNT 118

Query: 100 VPKDVLTSSPISDQFVKAGVAAVCFLSDLVNYKLPALDGSGTANSPTNFMVDPTRPLSNI 159
           V     TS  I+DQ VKAG+ AV   SD VN+K+P+ D  GT +S  N MVDP R ++++
Sbjct: 119 VLDGECTSPRIADQVVKAGIMAVNLFSDFVNFKIPSSDYGGTFSSSKNCMVDPARSITSV 178

Query: 160 KPANVKTIRRENVSKVYPNSSAESTVGSNP-STGYHNAKDKGDNSNIARRFKR-VSNASN 217
           KP+ +K +RREN+S+V+   S E  V S P S+  H +  K   S+  +  ++ VS A  
Sbjct: 179 KPSKIKHLRRENISRVHSRPSVEIPVDSKPQSSSNHGSNCKPAQSSYVKGSRQEVSEART 238

Query: 218 GTSLETHNVSSDNSDRRRIVQPRSKAHSNRLNSNFKSNLQPSDAKVVECVSERFSKPSRE 277
              +   N+SSD  D+R + Q R++ HSN   S+F S  Q + +      S+ F K    
Sbjct: 239 QKLVVFQNISSDKCDKRNLPQ-RTRVHSNSFTSHFHSIAQTTGSDFTNS-SKNFKKFPDN 296

Query: 278 MKIPAGLAPFSRHFASTGNVVESVSRILRQWKWGPLAEEALGNTNYSMDAYQANQVLKQL 337
           +K P G+AP +  F +  NVVESVS IL+Q KWGP AEEA+G  N S+DAYQANQ+LK++
Sbjct: 297 LKSPTGMAPITSSFLNAPNVVESVSCILQQLKWGPAAEEAIGKLNCSIDAYQANQILKRV 356

Query: 338 QDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVT 397
            DH VALGFF WL+R   F+HD HTYTTM+G+LGRA+QF AINKLLDQM++DGCQPNVVT
Sbjct: 357 DDHAVALGFFYWLKRLPRFRHDGHTYTTMIGLLGRAKQFAAINKLLDQMIKDGCQPNVVT 416

Query: 398 YNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQ 457
           YNR+IHSYGRANYL +A++VFKQMQ  GCEPDRVTYCTLIDIHAK+GFLDVAM MY+KMQ
Sbjct: 417 YNRIIHSYGRANYLQDAVNVFKQMQEAGCEPDRVTYCTLIDIHAKSGFLDVAMGMYEKMQ 476

Query: 458 AAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQ 517
            AGL+PDTFTYSV+INCLGKAGHL AAH+LFC MV++GC+PNLVTYNIMIALQAKARNY+
Sbjct: 477 DAGLTPDTFTYSVMINCLGKAGHLNAAHRLFCRMVDEGCVPNLVTYNIMIALQAKARNYE 536

Query: 518 SALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLV 577
            ALKLYRDMQ +GFEPDKVTY IVMEVLGHCG+L+EAE +F EM++KNWVPDEPVYGLLV
Sbjct: 537 IALKLYRDMQQSGFEPDKVTYCIVMEVLGHCGFLEEAEGIFIEMQKKNWVPDEPVYGLLV 596

Query: 578 DLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLK 637
           DLWGK+GNV+KAWEWY AML+AGL+PNVPTCNSLLSAFLRV QLSDAY LLQ ML  GLK
Sbjct: 597 DLWGKSGNVQKAWEWYHAMLKAGLKPNVPTCNSLLSAFLRVHQLSDAYQLLQSMLTFGLK 656

Query: 638 PSLQTYTLLLSCCTEARSPYDMGFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSF 697
           PSLQTYTLLLSCCT+A++  DMGFC ELM V+GHPAH FL+S+PS GP+GQNVRDH+  F
Sbjct: 657 PSLQTYTLLLSCCTDAQT-NDMGFCCELMQVTGHPAHTFLVSLPSAGPNGQNVRDHMSKF 715

Query: 698 LEMMHSEDRESKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAVKEKGMSYWLIN 757
           L++MHSEDRESKRGLVDAVVDFLHKSGLKEEAG VWE A QKNVYPDAVKEK   YWLIN
Sbjct: 716 LDLMHSEDRESKRGLVDAVVDFLHKSGLKEEAGCVWEAAMQKNVYPDAVKEKSSCYWLIN 775

Query: 758 LHVMSDGTAVIALSRTLAWFRKQMLISGVGPSRIDIVTGWGRRSRVTGTSLVRQAVQELL 817
           LHVMSDGTAV ALSRTLAWFR+Q+L+SGVGPSRIDIVTGWGRRS+VTG+SLVRQAVQ+LL
Sbjct: 776 LHVMSDGTAVTALSRTLAWFRQQLLLSGVGPSRIDIVTGWGRRSKVTGSSLVRQAVQDLL 835

Query: 818 HMFSFPFFTENGNSGCFVGCGEPLNKWLLQSYVDRMHLL 856
            +FSFPFFTENGNSGCFVGCGEPL++WL QSYV+RMHLL
Sbjct: 836 SIFSFPFFTENGNSGCFVGCGEPLSRWLHQSYVERMHLL 874


>gi|334182677|ref|NP_001185030.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|332191659|gb|AEE29780.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 886

 Score = 1171 bits (3030), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 581/878 (66%), Positives = 686/878 (78%), Gaps = 52/878 (5%)

Query: 1   MLRAKHITNLSSTARSFFLNGSRCSASDGSSCTCSEDETCVSRRQH-----------NAQ 49
           M+RAKHI+NLSSTARSFFLNGSR S +DG+SC  S+DE CVS+RQ             + 
Sbjct: 1   MIRAKHISNLSSTARSFFLNGSRTSVTDGNSCVYSDDENCVSKRQQLRKEAGQTEKRPSS 60

Query: 50  MVYTPARAGVVVSGEAAKAAGLQKSERVSVPS---------PSSLGRSDHVSYASSVDAV 100
           ++  P+  G ++ GE  K    +K +    PS         P+   +S  V+YAS+V  V
Sbjct: 61  ILPKPSVVGCILPGEVTKPVVPKKVDDFGRPSLLPQHVSSSPALPLKSHSVNYASTV--V 118

Query: 101 PKDV---LTSSPISDQFVKAGVAAVCFLSDLVNYKLPALDGSGTA-NSPTNFMVDPTRPL 156
            ++V    +S PI DQ  KAG+ AV FLSDL N K+P+ DG   A   P + MVDPTRP+
Sbjct: 119 REEVEGKASSEPIGDQIFKAGIVAVNFLSDLSNCKIPSYDGGSDAFGLPKSCMVDPTRPI 178

Query: 157 SNIKPANVKTIRRENVSKVYPNSSA-ESTVGS--NPSTGYHNAKDKGDNSNIARRFKRVS 213
           S++K +NVK IRRE+ +K+YP S+A ES+VG+  NPS+ +  AK+  + +   + F++VS
Sbjct: 179 SSVKSSNVKAIRREHFAKIYPRSAAKESSVGTTRNPSSNFRGAKE-AERTGFVKGFRQVS 237

Query: 214 NASNGTSLETHNVSSDNSDRRRIVQPRSKAHSNRLNSNFKSNLQPSDAKVVECVSERFSK 273
           N+  G SL T N   +   +R  V  R    SNR                   V   FS 
Sbjct: 238 NSVVGKSLPTTN---NTYGKRTSVLQRPHIDSNRF------------------VPSGFSN 276

Query: 274 PSREM-KIPAGLAPFSRHFASTGNVVESVSRILRQWKWGPLAEEALGNTNYSMDAYQANQ 332
            S EM K P+G A  SR + ++G++VE+VS +LR+++WGP AEEAL N    +DAYQANQ
Sbjct: 277 SSVEMMKGPSGTALTSRQYCNSGHIVENVSSVLRRFRWGPAAEEALQNLGLRIDAYQANQ 336

Query: 333 VLKQLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQ 392
           VLKQ+ D+  ALGFF WL+RQ GFKHD HTYTTMVG LGRA+QFGAINKLLD+MVRDGCQ
Sbjct: 337 VLKQMNDYGNALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQ 396

Query: 393 PNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDM 452
           PN VTYNRLIHSYGRANYLNEA++VF QMQ  GC+PDRVTYCTLIDIHAKAGFLD+AMDM
Sbjct: 397 PNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDM 456

Query: 453 YKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAK 512
           Y++MQA GLSPDTFTYSVIINCLGKAGHL AAH+LFCEMV+QGC PNLVTYNIM+ L AK
Sbjct: 457 YQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAK 516

Query: 513 ARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPV 572
           ARNYQ+ALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYL+EAEAVF EM++KNW+PDEPV
Sbjct: 517 ARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPV 576

Query: 573 YGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGML 632
           YGLLVDLWGKAGNV KAW+WY+AML AGLRPNVPTCNSLLS FLRV ++++AY LLQ ML
Sbjct: 577 YGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNML 636

Query: 633 NLGLKPSLQTYTLLLSCCTEARSPYDMGFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRD 692
            LGL+PSLQTYTLLLSCCT+ RS  DMGFC +LMA +GHPAHMFLL MP+ GPDG+NVR+
Sbjct: 637 ALGLRPSLQTYTLLLSCCTDGRSKLDMGFCGQLMASTGHPAHMFLLKMPAAGPDGENVRN 696

Query: 693 HVGSFLEMMHSEDRESKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAVKEKGMS 752
           H  +FL++MHSEDRESKRGLVDAVVDFLHKSG KEEAGSVWEVAAQKNV+PDA++EK  S
Sbjct: 697 HANNFLDLMHSEDRESKRGLVDAVVDFLHKSGQKEEAGSVWEVAAQKNVFPDALREKSCS 756

Query: 753 YWLINLHVMSDGTAVIALSRTLAWFRKQMLISGVGPSRIDIVTGWGRRSRVTGTSLVRQA 812
           YWLINLHVMS+GTAV ALSRTLAWFRKQML SG  PSRIDIVTGWGRRSRVTGTS+VRQA
Sbjct: 757 YWLINLHVMSEGTAVTALSRTLAWFRKQMLASGTCPSRIDIVTGWGRRSRVTGTSMVRQA 816

Query: 813 VQELLHMFSFPFFTENGNSGCFVGCGEPLNKWLLQSYV 850
           V+ELL++F  PFFTE+GNSGCFVG GEPLN+WLLQS++
Sbjct: 817 VEELLNIFGSPFFTESGNSGCFVGSGEPLNRWLLQSHL 854


>gi|356512664|ref|XP_003525037.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g74750-like [Glycine max]
          Length = 873

 Score = 1171 bits (3029), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 576/883 (65%), Positives = 686/883 (77%), Gaps = 37/883 (4%)

Query: 1   MLRAKHITNLSSTARSFFLNGSRCSASDGSSCTCSEDETCVSRRQHNAQMVYTPARAGVV 60
           MLRAK IT LSS+AR+F + GSRC+A+DGSSC+C+EDE CVSRRQH    V  PA+    
Sbjct: 1   MLRAKQITALSSSARTFLIGGSRCNAADGSSCSCTEDEICVSRRQHIKNHVL-PAQKPSS 59

Query: 61  VSGEAA-------------------KAAGLQKSERV----SVPSPSSLGRSDHVSYASSV 97
           ++ +A                    KA G+ +S  +    S  SP+   +SD V+YA  +
Sbjct: 60  LASKATSEVDETLVSENSVNGPACCKAKGVDQSSCIQQIRSASSPAC--KSDSVTYACDI 117

Query: 98  DAVPKDVLTSSPI-SDQFVKAGVAAVCFLSDLVNYKLPALDGSGTANSPTNFMVDPTRPL 156
           D V + V   SP+ SDQF +A +AA+ FLSDL NYK P  +G G  +   N MVD  R  
Sbjct: 118 DGVQEHVEHLSPLNSDQFYRASIAAINFLSDLANYKFPLSNGKGILSYSKNCMVDTARTP 177

Query: 157 SNIKPANVKTIRRENVSKVYPNSSAESTVGSNPSTGYHNAKDKGDNSNIARRFKRVSNAS 216
            NI+ +NVK I+REN + V+P  S  +   S  +  +H+ K KGD SN+ + FK + ++ 
Sbjct: 178 PNIRSSNVKQIKRENFTSVHPRPSVSTNSRSKRAGHHHSGKCKGDKSNLGKGFKHIPSSG 237

Query: 217 NGTSLETHNVSSDNSDRRRIVQPRSKAHSNRLNSNFKSNLQPSDAKVVECV---SERFSK 273
              S+ + N+  +N + R   Q R+   SN + +NF S ++ S+ ++VE V    E F+K
Sbjct: 238 MEKSVVSPNIPLNNHEHRAFPQ-RTTTKSNHIVTNFGSYMRASNTQMVEVVPTIKESFNK 296

Query: 274 PSREMKIPAGLAPFSRHFASTGNVVESVSRILRQWKWGPLAEEALGNTNYSMDAYQANQV 333
             R++K+ A  AP +R       +VE VS ILRQ +WGP AE+AL N N+SMDAYQANQ+
Sbjct: 297 HPRDLKMSARTAPMNRR------IVEVVSDILRQLRWGPTAEKALYNLNFSMDAYQANQI 350

Query: 334 LKQLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQP 393
           LKQLQD +VALGFF+WLRRQ GF+HD HTYTTMVGILGRAR+F +I+KLL+QMV+DGCQP
Sbjct: 351 LKQLQDPSVALGFFDWLRRQPGFRHDGHTYTTMVGILGRARRFDSISKLLEQMVKDGCQP 410

Query: 394 NVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMY 453
           NVVTYNRLIH YG ANYL EAL+VF +MQ VGCEPDRVTYCTLIDIHAKAGF+DVAM MY
Sbjct: 411 NVVTYNRLIHCYGCANYLKEALNVFNEMQEVGCEPDRVTYCTLIDIHAKAGFIDVAMSMY 470

Query: 454 KKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKA 513
           K+MQ AGLSPDTFTYSVIINCLGKAG+L AAH LFCEMV  GC+PNLVTYNIMIALQAKA
Sbjct: 471 KRMQEAGLSPDTFTYSVIINCLGKAGNLAAAHWLFCEMVEHGCVPNLVTYNIMIALQAKA 530

Query: 514 RNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVY 573
           RNY+ ALKLY DMQNAGF+PDKVTYSIVME LGHCGYL+EAE+VF EM++KNWVPDEPVY
Sbjct: 531 RNYEMALKLYHDMQNAGFQPDKVTYSIVMEALGHCGYLEEAESVFVEMQQKNWVPDEPVY 590

Query: 574 GLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLN 633
           GLLVDLWGKAGNV KA EWY+AML AGL PNVPTCNSLLSAFLR+ +L DAY+L+Q M+ 
Sbjct: 591 GLLVDLWGKAGNVEKASEWYQAMLNAGLLPNVPTCNSLLSAFLRLHRLPDAYNLVQSMVA 650

Query: 634 LGLKPSLQTYTLLLSCCTEARSPYDMGFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDH 693
           LGL+PSLQTYTLLLSCCTEA+  +DMGF  ELMAV+GHPAH FLLSMP+ GPDGQNVRDH
Sbjct: 651 LGLRPSLQTYTLLLSCCTEAQPAHDMGFFCELMAVTGHPAHAFLLSMPAAGPDGQNVRDH 710

Query: 694 VGSFLEMMHSEDRESKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAVKEKGMSY 753
           V  FL+MMH+EDRE KRGLVD+VV+FL+KSGLKEEAGSVWE AAQ+NVYPDAVKEK   Y
Sbjct: 711 VSKFLDMMHTEDREGKRGLVDSVVNFLNKSGLKEEAGSVWEAAAQRNVYPDAVKEKSSRY 770

Query: 754 WLINLHVMSDGTAVIALSRTLAWFRKQMLISGVGPSRIDIVTGWGRRSRVTGTSLVRQAV 813
           WLINLHVMSDGTAV ALSRTLAWFR++ML+SG+ PSR+DI+TGWGRRS+VTG+SLVRQAV
Sbjct: 771 WLINLHVMSDGTAVTALSRTLAWFRQRMLVSGIRPSRVDIITGWGRRSKVTGSSLVRQAV 830

Query: 814 QELLHMFSFPFFTENGNSGCFVGCGEPLNKWLLQSYVDRMHLL 856
           Q+LLH FSFPF  E GNSGCFVGCGEPL +WL  SYV+RMHLL
Sbjct: 831 QDLLHTFSFPFLAEKGNSGCFVGCGEPLCQWLNHSYVERMHLL 873


>gi|297844848|ref|XP_002890305.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297336147|gb|EFH66564.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 860

 Score = 1165 bits (3015), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 584/884 (66%), Positives = 688/884 (77%), Gaps = 52/884 (5%)

Query: 1   MLRAKHITNLSSTARSFFLNGSRCSASDGSSCTCSEDETCVSRRQH-----------NAQ 49
           M+R KHI+NLSSTARSFFLNGSR S +DG+SC  ++DETCVSRRQ             + 
Sbjct: 1   MIRPKHISNLSSTARSFFLNGSRTSVADGNSCAYTDDETCVSRRQQLRKEAAQTKKRPSS 60

Query: 50  MVYTPARAGVVVSGEAAKAAGLQKSERVSVPS---------PSSLGRSDHVSYASSVDAV 100
           ++  P+  G ++ GE  K    +K +    PS         P+   +S  V+YAS++  V
Sbjct: 61  ILPKPSVVGCILPGEVTKPVVPKKVDDFGRPSLLPQHVSSSPALPLKSHSVNYASTI--V 118

Query: 101 PKDV---LTSSPISDQFVKAGVAAVCFLSDLVNYKLPALDGSGTA-NSPTNFMVDPTRPL 156
            ++V    +S PI DQ  KAG+ AV FLSDL N K+P+ DG   A   P + MVDPTRP+
Sbjct: 119 REEVEGKASSEPIGDQIFKAGIVAVNFLSDLANCKIPSYDGGSEAFGLPKSCMVDPTRPI 178

Query: 157 SNIKPANVKTIRRENVSKVYPNSSA-ESTVGS--NPSTGYHNAKDKGDNSNIARRFKRVS 213
           S++K ++VK IRRE  SKVYP S+A ES++G   NPS+ +  AK+  + +   + F++VS
Sbjct: 179 SSVKSSSVKAIRREQFSKVYPRSAAKESSIGKTRNPSSNFRGAKE-AERTGFVKGFRQVS 237

Query: 214 NASNGTSLETHNVSSDNSDRRRIVQPRSKAHSNRLNSNFKSNLQPSDAKVVECVSERFSK 273
           N+  G SL T N   +   +R  V  R    SNR                   V   FS 
Sbjct: 238 NSMVGKSLPTTN---NTYGKRTSVLQRPHIDSNRF------------------VPSGFSN 276

Query: 274 PSREM-KIPAGLAPFSRHFASTGNVVESVSRILRQWKWGPLAEEALGNTNYSMDAYQANQ 332
            S EM K P G A  SR + ++G +VE+VS +LR+++WGP AEEAL N    +DAYQANQ
Sbjct: 277 SSMEMVKGPPGTALTSRQYCNSGYIVENVSSVLRRFRWGPAAEEALQNLGLRIDAYQANQ 336

Query: 333 VLKQLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQ 392
           VLKQ+ D+  ALGFF WL+RQ GFKHD HTYTTMVG LGRA+QFGAINKLLD+MVRDGCQ
Sbjct: 337 VLKQMNDYGNALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQ 396

Query: 393 PNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDM 452
           PN VTYNRLIHSYGRANYLNEA++VF QMQ  GC+PDRVTYCTLIDIHAKAGFLD+AMDM
Sbjct: 397 PNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDM 456

Query: 453 YKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAK 512
           Y++MQA GLSPDTFTYSVIINCLGKAGHL AAH+LFCEMV+QGC PNLVTYNIM+ L AK
Sbjct: 457 YQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAK 516

Query: 513 ARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPV 572
           ARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYL+EAEAVF EM++KNW+PDEPV
Sbjct: 517 ARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPV 576

Query: 573 YGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGML 632
           YGLLVDLWGKAGNV KAW+WY+AML AGL PNVPTCNSLLS FLRV ++++AY LLQ ML
Sbjct: 577 YGLLVDLWGKAGNVEKAWQWYQAMLHAGLLPNVPTCNSLLSTFLRVNKIAEAYELLQNML 636

Query: 633 NLGLKPSLQTYTLLLSCCTEARSPYDMGFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRD 692
            LGL+PSLQTYTLLLSCCT+ RS  DMG+C +LMA +GHPAHMFLL MP+ GP+G+NVR+
Sbjct: 637 ALGLRPSLQTYTLLLSCCTDGRSKLDMGYCGQLMASTGHPAHMFLLKMPAAGPNGENVRN 696

Query: 693 HVGSFLEMMHSEDRESKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAVKEKGMS 752
           H  +FL++MHSEDRESKRGLVDAVVDFLHKSG KEEAGSVWEVAAQKNV+PDA++EK  S
Sbjct: 697 HANNFLDLMHSEDRESKRGLVDAVVDFLHKSGQKEEAGSVWEVAAQKNVFPDALREKSCS 756

Query: 753 YWLINLHVMSDGTAVIALSRTLAWFRKQMLISGVGPSRIDIVTGWGRRSRVTGTSLVRQA 812
           YWLINLHVMS+GTAV ALSRTLAWFR+QML+SG  PSRIDIVTGWGRRSRVTGTS+VRQA
Sbjct: 757 YWLINLHVMSEGTAVTALSRTLAWFRRQMLVSGTCPSRIDIVTGWGRRSRVTGTSMVRQA 816

Query: 813 VQELLHMFSFPFFTENGNSGCFVGCGEPLNKWLLQSYVDRMHLL 856
           V+ELL++F  PFFTE+GNSGCFVGCGE LNKWLLQS+V+RMHLL
Sbjct: 817 VEELLNIFGSPFFTESGNSGCFVGCGESLNKWLLQSHVERMHLL 860


>gi|297734042|emb|CBI15289.3| unnamed protein product [Vitis vinifera]
          Length = 793

 Score = 1025 bits (2649), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 512/760 (67%), Positives = 583/760 (76%), Gaps = 39/760 (5%)

Query: 1   MLRAKHITNLSSTARSFFLNGSRCSASDGSSCTCSEDETCVSRRQHNAQMVY-------- 52
           MLR K I  LS++ARS  ++G+R S  DG+SC CSEDETCVS +QH    V         
Sbjct: 28  MLRTKQIGPLSNSARSILISGTRSSTPDGNSCPCSEDETCVSTKQHARNEVLIMQKQTTL 87

Query: 53  ---TPARAGVVVSGEAAKAAGLQKSERVS--------VPSPSSLGRSDHVSYASSVDAVP 101
              T AR G +  G+A K  G QK E V         V +P S+  SD VSY S    V 
Sbjct: 88  ASKTAARVGPLFLGDAVKVVGSQKVESVEHATSLAQVVAAPRSVVGSDCVSYVSDNVGVN 147

Query: 102 KDVLTSSPISDQFVKAGVAAVCFLSDLVNYKLPALDGSGTANSPTNFMVDPTRPLSNIKP 161
            D + + PISDQF++AG+ AV FLSDLVNYK+P  DGSG    P N MVDPT+PLS IK 
Sbjct: 148 NDAVHAPPISDQFIRAGIVAVNFLSDLVNYKIPMSDGSGMLKLPQNCMVDPTKPLSKIKS 207

Query: 162 ANVKTIRRENVSKVYPNSSAESTVGSNPSTGYHNAKDKGDNSNIARRFKRVSNASNGTSL 221
            N+K IR+   SKV   SSA     SN ++ YH+ + KGD S   +    V +     ++
Sbjct: 208 TNIKPIRKGKFSKVRAESSANIAAASNSTSSYHSTRGKGDKSGSVKGCSHVGDTWTRNTV 267

Query: 222 ETHNVSSDNSDRRRIVQPRSKAHSNRLNSNFKSNLQP-SDAKVVECVSERFSKPSREMKI 280
           +T ++SSD  ++R + Q +SKA+SN   SN   N  P  D K++                
Sbjct: 268 DTRSLSSDTHNKRSMPQ-KSKAYSNYSTSNSNFNSNPLRDTKMI---------------- 310

Query: 281 PAGLAPFSRHFASTGNVVESVSRILRQWKWGPLAEEALGNTNYSMDAYQANQVLKQLQDH 340
             G+AP SR F S+G+VVE+VSRILRQ  WGP AEEAL N N  MDAYQANQVLKQ+QDH
Sbjct: 311 --GIAPVSRQFGSSGHVVENVSRILRQLSWGPAAEEALRNLNCLMDAYQANQVLKQIQDH 368

Query: 341 TVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNR 400
            VALGFF WL+RQ GFKHD HTYTTMVGILGRARQFGAINKLL +MVRDGCQPNVVTYNR
Sbjct: 369 PVALGFFYWLKRQTGFKHDGHTYTTMVGILGRARQFGAINKLLAEMVRDGCQPNVVTYNR 428

Query: 401 LIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAG 460
           LIHSYGRANYLNEA+ VF +MQ  GC+PDRVTYCTLIDIHAKAGFLDVA+ MY+KMQ A 
Sbjct: 429 LIHSYGRANYLNEAVSVFDRMQEAGCQPDRVTYCTLIDIHAKAGFLDVALHMYQKMQEAH 488

Query: 461 LSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSAL 520
           LSPDTFTYSVIINCLGKAGHL +AH+LFCEMV+QGC+PNLVTYNIMIALQAKARNY +AL
Sbjct: 489 LSPDTFTYSVIINCLGKAGHLTSAHKLFCEMVDQGCVPNLVTYNIMIALQAKARNYPTAL 548

Query: 521 KLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLW 580
           +LYRDMQNAGF+PDKVTYSIVMEVLGHCG+L+EAEA+F EM+RKNWVPDEPVYGLLVDLW
Sbjct: 549 ELYRDMQNAGFQPDKVTYSIVMEVLGHCGHLEEAEAIFTEMKRKNWVPDEPVYGLLVDLW 608

Query: 581 GKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSL 640
           GK GNV K+WEWY+AML AGL PNVPTCNSLLSAFLRV +LSDAY+LLQ ML LGL+PSL
Sbjct: 609 GKVGNVEKSWEWYQAMLNAGLCPNVPTCNSLLSAFLRVHRLSDAYNLLQSMLRLGLQPSL 668

Query: 641 QTYTLLLSCCTEARSPYDMGFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEM 700
           QTYTLLLSCCTEARS +DMGFC ELMAV+GHPAHMFLLSMP+ GPDGQNVRDHV  FL++
Sbjct: 669 QTYTLLLSCCTEARSSFDMGFCGELMAVTGHPAHMFLLSMPAAGPDGQNVRDHVSKFLDL 728

Query: 701 MHSEDRESKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKN 740
           MHSEDRESKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKN
Sbjct: 729 MHSEDRESKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKN 768


>gi|242086476|ref|XP_002443663.1| hypothetical protein SORBIDRAFT_08g023090 [Sorghum bicolor]
 gi|241944356|gb|EES17501.1| hypothetical protein SORBIDRAFT_08g023090 [Sorghum bicolor]
          Length = 853

 Score =  966 bits (2496), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 495/877 (56%), Positives = 601/877 (68%), Gaps = 45/877 (5%)

Query: 1   MLRAKHITNLSSTARSFFLNGSRCSASDGSSCTCSEDETCVSRRQHNA---QMVYTPARA 57
           MLRAK +  L+  ARSF+LNGSRC ++DG+SCTC EDET    RQ      Q  ++  R 
Sbjct: 1   MLRAKQLGTLTQCARSFYLNGSRCGSTDGASCTCPEDETYAPNRQTATAIEQKSHSTHRT 60

Query: 58  GV--------VVSGEAAKAAGLQKSERVSVPSPSSLGRSDHVSYASSV---DAVPKDVLT 106
            V        V+      A  +  +       P+S  RS+       +   D V     T
Sbjct: 61  SVKIQPPVQDVIGATGHPAPAVHATTSPPEKEPASSNRSNRPHNRQQIIGSDYVQPSKQT 120

Query: 107 SSPISDQFVKAGVAAVCFLSDLVNYKLPALDGSGTANSPTNFMVDPTRPLSNIKPANVKT 166
           +  IS    ++G+A     S+LVN+K  + +GS    +P        + LS+   +N + 
Sbjct: 121 ARSIS----QSGIAGAGVYSELVNFKSSSNNGS-IDQAPQMGTNYSYQILSDSHSSNNRA 175

Query: 167 IRRENV--SKVYPNSSAESTVGSN-PSTGYHNAKDKGDNSNIARRFKRVSNASNGTSLET 223
             + N    K+  N S  +  G   P  GY   K                 +S+G S+  
Sbjct: 176 RNQLNFPEGKMTYNPSVNNEFGKGYPRAGYAKPK----------------QSSSGPSVMV 219

Query: 224 HNVSSDNSDRRRIVQPRSKAHSNRLNSNFKSN----LQPSDAKVVECVSERFSKPSREMK 279
            +  S    +    QP +K HSN  NS+ + +      PS   V      +    +  +K
Sbjct: 220 SSSPSQIRSQGHPGQPYAKYHSNHFNSDARRDEIQTRNPSGPNVFSGSGNKIQGSTGTIK 279

Query: 280 IPAGLAPFSRHFASTGNVVESVSRILRQWKWGPLAEEALGNTNYSMDAYQANQVLKQLQD 339
             +G    S     +   VE     L+Q KWGP+ E  L N +  +DA+QANQVLK L D
Sbjct: 280 AHSGAPQSSLRSLKSLRSVEQYYHTLQQMKWGPMTEHVLDNLHCKIDAFQANQVLKLLHD 339

Query: 340 HTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYN 399
           HTVALGFF WL+RQ GFKHD HTYTTM+GILG+ARQFG + KLLD+M R  C+P VVTYN
Sbjct: 340 HTVALGFFQWLKRQPGFKHDGHTYTTMIGILGQARQFGVLKKLLDEMSRAHCKPTVVTYN 399

Query: 400 RLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAA 459
           R+IH+YGRANYL EA+ VF++MQ  G EPDRVTYCTLIDIHAKAG+LD+AMD+Y +MQ  
Sbjct: 400 RIIHAYGRANYLKEAVKVFEEMQEAGYEPDRVTYCTLIDIHAKAGYLDIAMDLYGRMQEV 459

Query: 460 GLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSA 519
           GLSPDTFTYS ++NCLGK G L AA++LFCEM+  GC PNLVTYNIMIALQAKARNY++ 
Sbjct: 460 GLSPDTFTYSAMVNCLGKGGQLAAAYKLFCEMIENGCTPNLVTYNIMIALQAKARNYENV 519

Query: 520 LKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDL 579
           +KLY+DMQ AGF PDK+TYSIVMEVLGHCG+LDEAEAVF EMRR +W PDEPVYGLLVDL
Sbjct: 520 VKLYKDMQVAGFRPDKITYSIVMEVLGHCGHLDEAEAVFIEMRR-DWAPDEPVYGLLVDL 578

Query: 580 WGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPS 639
           WGKAGNV KA  WY+AMLQ GL+PNVPTCNSLLSAFL++ +  DAY +LQ ML  GL PS
Sbjct: 579 WGKAGNVDKALGWYQAMLQDGLQPNVPTCNSLLSAFLKMNRFQDAYIVLQNMLAQGLVPS 638

Query: 640 LQTYTLLLSCCTEARSPYDMGFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLE 699
           +QTYTLLLSCCTEA++   MG C +LMA++GHPAHMFLL +P   P GQNVRDH G FL+
Sbjct: 639 VQTYTLLLSCCTEAQA--QMGLCGQLMAITGHPAHMFLLYLPDAEPGGQNVRDHTGYFLD 696

Query: 700 MMHSEDRESKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAVKEKGMSYWLINLH 759
           MMHSEDRESKRGL+DAV+DFLHKSGLKEEAG +WEVAAQKNVYPD+V+EK  SYWLINLH
Sbjct: 697 MMHSEDRESKRGLMDAVIDFLHKSGLKEEAGLIWEVAAQKNVYPDSVREKSSSYWLINLH 756

Query: 760 VMSDGTAVIALSRTLAWFRKQMLISGVGPSRIDIVTGWGRRSRVTGTSLVRQAVQELLHM 819
           +MS+GTAV ALSRTLAWF +Q+L  G GP RIDIVTGWGRRSRVTG+SLVRQ+VQ+LL++
Sbjct: 757 LMSEGTAVTALSRTLAWFHRQILTLGTGPERIDIVTGWGRRSRVTGSSLVRQSVQKLLNL 816

Query: 820 FSFPFFTENGNSGCFVGCGEPLNKWLLQSYVDRMHLL 856
           F FPFFT  GN+GCFVGCGEPLNKWL   YV+RMHLL
Sbjct: 817 FEFPFFTTRGNTGCFVGCGEPLNKWLHNPYVERMHLL 853


>gi|357159149|ref|XP_003578355.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g18900-like [Brachypodium distachyon]
          Length = 857

 Score =  949 bits (2453), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 494/887 (55%), Positives = 610/887 (68%), Gaps = 61/887 (6%)

Query: 1   MLRAKHITNLSSTARSFFLNGSRCSASDGSSCTCSEDETCVSRRQHNA--QMVYTPARAG 58
           MLRAK +  LS  ARSF+L+GSRC ++DG+SCTC ED+TC S+RQ +   Q   +  R+ 
Sbjct: 1   MLRAKQLGTLSQCARSFYLSGSRCGSTDGASCTCPEDDTCASKRQASGIQQKFQSTGRSS 60

Query: 59  VVV-------SGEAAKAAGLQKSERVSVPS-------PSSLGRSDHVSYASSVDAVPKDV 104
           V          G    A G        VPS       P+S+ R++     S+   +  D 
Sbjct: 61  VKALPSSAQHVGSIGTATGYPPQAVHVVPSTLTPGNEPASINRNNP---PSNYQVLGNDY 117

Query: 105 LTSSPISDQFV-KAGVAAVCFLSDLVNYKLPALDGSGTANSPTNFMVDPTRPLSNIKPAN 163
           +  S  + + V ++G+A     S+LVN +  + +G  T  +P        +PLS+ + +N
Sbjct: 118 VQPSKQTARSVSQSGIAGAGVYSELVNMRSSSTNGR-TEQAPQAIANYSNKPLSSAQSSN 176

Query: 164 VKTIRRENVSKVYPNSSAESTVGSNPSTGYHNAKDKGDNSNIARRFKRVSNASNGTSLET 223
            K   +        +S  E+ V   PS       D G   +     K   N S  +++  
Sbjct: 177 NKAHNQ--------HSFPEAKVPYTPSM----QNDFGKGVSRPGYTKSKQNFSGPSAV-- 222

Query: 224 HNVSSDNSDRRRIVQPRSKAHSNRLNSNFKSNLQPSDAKVVECVSERFSKP------SRE 277
             VSS  +      Q R++ H  + N N+ SN   SD +     +  FS P      S +
Sbjct: 223 --VSSSTA------QARNQRHPGQGNPNYHSNNLNSDGRWAGVRTRNFSAPTVYSGPSDK 274

Query: 278 MKIPAGL------APFS--RHFASTGNVVESVSRILRQWKWGPLAEEALGNTNYSMDAYQ 329
            K P+G        P S  R   S    VE     L+Q KWGP+ E  L + +  +DA+Q
Sbjct: 275 SKGPSGTIKAHGGGPQSNLRSLKSL-RAVEQYYHTLQQMKWGPMTEHVLDSLHCKIDAFQ 333

Query: 330 ANQVLKQLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRD 389
           ANQVLK L DHT+ALGFF+WL+RQ GFKHD HTYTTM+GILG+ARQFG +  LL +M RD
Sbjct: 334 ANQVLKLLHDHTMALGFFHWLKRQPGFKHDGHTYTTMIGILGQARQFGIMRNLLHEMNRD 393

Query: 390 GCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVA 449
            C+P VVTYNR+IH+YGRANYL EA+ VF++M+  G EPDRVTYCTLIDIHAKAG+L+VA
Sbjct: 394 RCKPTVVTYNRIIHAYGRANYLREAVKVFEEMEEAGYEPDRVTYCTLIDIHAKAGYLEVA 453

Query: 450 MDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIAL 509
           MD+Y +MQ  GLSPDTFTYS ++NCLGK G L AA++LFCEM+  GC PNLVTYNI+IAL
Sbjct: 454 MDLYGRMQEVGLSPDTFTYSAMVNCLGKGGQLAAAYKLFCEMIENGCTPNLVTYNIIIAL 513

Query: 510 QAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPD 569
           QAKARNY + +KLYRDMQ AGF PDK+TYSIVMEVLGHCG+LDEAEAVF EMRR +W PD
Sbjct: 514 QAKARNYDNVVKLYRDMQVAGFRPDKITYSIVMEVLGHCGHLDEAEAVFIEMRR-DWAPD 572

Query: 570 EPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQ 629
           EPVYGLLVDLWGKAGNV KA  WY AMLQ GL+PNVPTCNSLLSAFL++ +  DAY +LQ
Sbjct: 573 EPVYGLLVDLWGKAGNVDKALGWYHAMLQDGLQPNVPTCNSLLSAFLKINRFQDAYSVLQ 632

Query: 630 GMLNLGLKPSLQTYTLLLSCCTEARSPYDMGFCHELMAVSGHPAHMFLLSMPSPGPDGQN 689
            ML  GL PSLQTYTLLLSCCT+A +   MG C +LMA++GHPAHMFLL +P   P G+N
Sbjct: 633 NMLAQGLVPSLQTYTLLLSCCTDAHA--QMGLCCQLMAITGHPAHMFLLYLPDAEPGGEN 690

Query: 690 VRDHVGSFLEMMHSEDRESKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAVKEK 749
           VRDH   FL+MMHSEDRESKRGL+DAV+DFLHKSGLKEEAG +WEVAAQKNVYPD+V+EK
Sbjct: 691 VRDHTRYFLDMMHSEDRESKRGLMDAVIDFLHKSGLKEEAGFIWEVAAQKNVYPDSVREK 750

Query: 750 GMSYWLINLHVMSDGTAVIALSRTLAWFRKQMLISGVGPSRIDIVTGWGRRSRVTGTSLV 809
             +YWLINLH+MS+GTAV ALSRTLAWF +Q+L+ G  P RIDIVTGWGRRSRVTG+SLV
Sbjct: 751 SSAYWLINLHLMSEGTAVTALSRTLAWFHRQILVMGSCPERIDIVTGWGRRSRVTGSSLV 810

Query: 810 RQAVQELLHMFSFPFFTENGNSGCFVGCGEPLNKWLLQSYVDRMHLL 856
           RQ+V++LLH+F FP FT  GN+GCFVGCG+PLN+WL   YV+RMHLL
Sbjct: 811 RQSVEKLLHLFQFPLFTARGNTGCFVGCGQPLNQWLHNPYVERMHLL 857


>gi|115489794|ref|NP_001067384.1| Os12g0638900 [Oryza sativa Japonica Group]
 gi|77556813|gb|ABA99609.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
 gi|113649891|dbj|BAF30403.1| Os12g0638900 [Oryza sativa Japonica Group]
 gi|125580213|gb|EAZ21359.1| hypothetical protein OsJ_37016 [Oryza sativa Japonica Group]
          Length = 859

 Score =  949 bits (2452), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 489/889 (55%), Positives = 603/889 (67%), Gaps = 63/889 (7%)

Query: 1   MLRAKHITNLSSTARSFFLNGSRCSASDGSSCTCSEDETCVSRRQ---------HNAQMV 51
           MLRAK +  L+  ARSF++NGSRC ++DG+SCTC EDET   +RQ         H+ +  
Sbjct: 1   MLRAKQLGTLTQCARSFYVNGSRCGSTDGASCTCPEDETSAPKRQTANGIEQKFHSTRRP 60

Query: 52  YTPARAGVV--VSGEAAKAAGLQKSERVSVPS-------PSSLGRSDHVSYASSV--DAV 100
              A+   V  V G   +A G        VPS       P+S   S+H      +  D V
Sbjct: 61  SVKAQTPSVQHVVGSIGRATGYPAPAVHIVPSNSSQETEPASGNTSNHPRTPQVLGNDYV 120

Query: 101 PKDVLTSSPISDQFVKAGVAAVCFLSDLVNYKLPALDGSGTANSPTNFMVDPTRPLSNIK 160
                T+  IS     + +A     ++LVN K  + +G GT  +         +PLS+ +
Sbjct: 121 QPSKQTARSIS----HSAIAGAGVYTELVNLKSTSNNG-GTNQASQMATSYSYQPLSDAQ 175

Query: 161 PANVKTIRRENVSKVYPNSSAESTVGSNPSTGYHNAKDKGDNSNIARRFKRVSNASNGTS 220
           P+N+K+  +        +S  E+ +  NPS            +N+ +   R   A +  S
Sbjct: 176 PSNIKSHNQ--------HSLPEAKMPYNPSV----------QNNLGKGVSRSGYAKSNQS 217

Query: 221 LETHNVSSDNSDRRRIVQPRSKAHSNRLNSNFKSNLQPSDAKVVECVSERFSKPSR---- 276
                    NS      Q +++ H  + ++N+ SN   +DA+  E  ++  S P+     
Sbjct: 218 FSGPPAMVANSPS----QIKNQRHPGQRHTNYHSNNFSTDARWDEVQTQNLSAPAMYTGS 273

Query: 277 ---------EMKIPAGLAPFSRHFASTGNVVESVSRILRQWKWGPLAEEALGNTNYSMDA 327
                     +K   G    +     +   VE     L+Q KWGP+ E  L N +  +DA
Sbjct: 274 GHKSQALAGTIKSHGGGPQSNLRSLKSLRSVEQYYHTLQQMKWGPMTEHVLDNLHCKIDA 333

Query: 328 YQANQVLKQLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMV 387
           +QANQVLK L DHT+ALGFF WL+RQ GFKHD H+YTTM+GILG+ARQFG + KLLD+M 
Sbjct: 334 FQANQVLKLLHDHTIALGFFQWLKRQPGFKHDGHSYTTMIGILGQARQFGTMRKLLDEMN 393

Query: 388 RDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLD 447
              C+P VVTYNR+IH+YGRANYL EA+ VF++MQ  G EPDRVTYCTLIDIHAK G+L+
Sbjct: 394 SVHCKPTVVTYNRIIHAYGRANYLREAVKVFEEMQKAGYEPDRVTYCTLIDIHAKGGYLE 453

Query: 448 VAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMI 507
            AMD+Y +MQ  GLSPDTFTYS ++NCLGK GHL AA++LFCEMV  GC PNLVTYNIMI
Sbjct: 454 FAMDLYTRMQEVGLSPDTFTYSAMVNCLGKGGHLAAAYKLFCEMVENGCTPNLVTYNIMI 513

Query: 508 ALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWV 567
           ALQAKARNY++ +KLY+DMQ AGF PDK+TYSIVMEVLGHCG+LDEAEAVF EMR  +W 
Sbjct: 514 ALQAKARNYENVVKLYKDMQVAGFRPDKITYSIVMEVLGHCGHLDEAEAVFIEMRH-DWA 572

Query: 568 PDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHL 627
           PDEPVYGLLVDLWGKAGNV KA  WY AMLQ GL+PNVPTCNSLLSAFL++ +  DAY +
Sbjct: 573 PDEPVYGLLVDLWGKAGNVDKALGWYHAMLQDGLQPNVPTCNSLLSAFLKINRFQDAYSV 632

Query: 628 LQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGFCHELMAVSGHPAHMFLLSMPSPGPDG 687
           LQ ML  GL PSLQTYTLLLSCCTEA++   MG C +LMA++GHPAHMFLL +P   P G
Sbjct: 633 LQNMLAQGLVPSLQTYTLLLSCCTEAQA--QMGLCCQLMAITGHPAHMFLLYLPDAEPGG 690

Query: 688 QNVRDHVGSFLEMMHSEDRESKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAVK 747
           QNVRDH   FL+MMHSEDRESKRGL+DAV+DFLHKSGLKEEAG +WEVAAQ+NVYPD+V+
Sbjct: 691 QNVRDHTRYFLDMMHSEDRESKRGLMDAVIDFLHKSGLKEEAGFIWEVAAQRNVYPDSVR 750

Query: 748 EKGMSYWLINLHVMSDGTAVIALSRTLAWFRKQMLISGVGPSRIDIVTGWGRRSRVTGTS 807
           EK  SYWLINLH+MS+GTAV ALSRTLAWF +Q+L  G  P RIDIVTGWGRRSRVTG+S
Sbjct: 751 EKDPSYWLINLHLMSEGTAVTALSRTLAWFHRQILTMGKCPERIDIVTGWGRRSRVTGSS 810

Query: 808 LVRQAVQELLHMFSFPFFTENGNSGCFVGCGEPLNKWLLQSYVDRMHLL 856
           LVRQ+VQ+LLH+F FPF T  GN+GCFVGCGEPLN+WL   YV+RMHLL
Sbjct: 811 LVRQSVQKLLHLFEFPFVTTRGNTGCFVGCGEPLNRWLHNPYVERMHLL 859


>gi|414869157|tpg|DAA47714.1| TPA: hypothetical protein ZEAMMB73_516901 [Zea mays]
          Length = 853

 Score =  947 bits (2448), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 490/879 (55%), Positives = 604/879 (68%), Gaps = 49/879 (5%)

Query: 1   MLRAKHITNLSSTARSFFLNGSRCSASDGSSCTCSEDETCVSRRQHNA---QMVYTPARA 57
           MLRAK ++ L+  ARSF+LNGSRC ++DG+SCTC EDET   +RQ  +   Q  ++  R 
Sbjct: 1   MLRAKQLSTLTQCARSFYLNGSRCGSTDGASCTCPEDETYAPKRQTASAIEQNSHSTHRT 60

Query: 58  GVVVS---GEAAKAAG-----LQKSERVSVPSPSSLGRSDHVSYASSV---DAVPKDVLT 106
            V +     +A +A G     +  +   S    +S  RS+H      +   D V     T
Sbjct: 61  FVKIQPPLQDATRATGHPVPAVHATTSTSGKEAASSNRSNHPHSHHQIIRSDYVQPSKQT 120

Query: 107 SSPISDQFVKAGVAAVCFLSDLVNYKLPALDGSGTANSPTNFMVDPTRPLSNIKPANVKT 166
           +  IS    ++G+A     S+LVN +  + +GS T  +P        + LS+   +N + 
Sbjct: 121 ARSIS----QSGIAGAGVYSELVNIRSSSNNGS-TDQAPQMGTNYSYQILSDNHSSNNRA 175

Query: 167 IRRENVSKVYPNSSAESTVGSNPSTGYHNAKDKGDNSNIARRFKRVSNASNGTSLETHNV 226
             + N    +P    E  +  NPS           N+   + + R   A    S    +V
Sbjct: 176 QNQLN----FP----EGKMAYNPSV----------NNEFGKGYPRAGYAKPKQSFSGPSV 217

Query: 227 SSDNSDRRRIVQ-----PRSKAHSNRLNSNFKSN----LQPSDAKVVECVSERFSKPSRE 277
              +S  +   Q     P +K HSN  NS+ + +      PS   V      +    +  
Sbjct: 218 MVSSSPSQIRSQGHPGLPPAKYHSNHFNSDARQDDVQTRNPSGPNVFSGSGNKIQGSTGR 277

Query: 278 MKIPAGLAPFSRHFASTGNVVESVSRILRQWKWGPLAEEALGNTNYSMDAYQANQVLKQL 337
           +K  +G    +         VE     L+Q KWGP+ E  L N +  +DA+QANQVLK L
Sbjct: 278 VKAHSGGPQSNLRSLKLLRSVEQYYHTLQQMKWGPMTEHVLDNLHCKIDAFQANQVLKLL 337

Query: 338 QDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVT 397
            DHTVALGFF WL+RQ GFKHD HTYTTM+GILG+ARQFG + +LLD+M R  C+P VVT
Sbjct: 338 HDHTVALGFFQWLKRQPGFKHDGHTYTTMIGILGQARQFGVLKELLDEMSRAHCKPTVVT 397

Query: 398 YNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQ 457
           YNR+IH+YGRANYL EA+ VF++MQ  G EPDRVTYCTLIDIHAKAG+LD+AMD+Y +MQ
Sbjct: 398 YNRIIHAYGRANYLKEAVKVFEEMQEAGYEPDRVTYCTLIDIHAKAGYLDIAMDLYGRMQ 457

Query: 458 AAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQ 517
             GLSPDTFTYSV++NCLGK G L AA++LFCEM+  GC PNLVTYNIMIALQAKARNY+
Sbjct: 458 EVGLSPDTFTYSVMVNCLGKGGQLAAAYKLFCEMIENGCTPNLVTYNIMIALQAKARNYE 517

Query: 518 SALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLV 577
           + +KLY+DMQ AGF PDK+TYSIVMEVLGHCG+LDEAEAVF EMRR +W PDEPVYGLLV
Sbjct: 518 NVVKLYKDMQVAGFRPDKITYSIVMEVLGHCGHLDEAEAVFIEMRR-DWAPDEPVYGLLV 576

Query: 578 DLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLK 637
           DLWGKAGNV KA  WY+AMLQ GL+PNVPTCNSLLSAFL++ +  DAY +LQ ML  GL 
Sbjct: 577 DLWGKAGNVDKALGWYQAMLQDGLQPNVPTCNSLLSAFLKMNRFQDAYIVLQNMLARGLV 636

Query: 638 PSLQTYTLLLSCCTEARSPYDMGFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSF 697
           PS+QTYTLLLSCCT  ++   MG C +LMA++GHPAHMFLL +P     GQNVRDH G F
Sbjct: 637 PSVQTYTLLLSCCTVGQA--QMGLCCQLMAITGHPAHMFLLYLPDAEAGGQNVRDHTGYF 694

Query: 698 LEMMHSEDRESKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAVKEKGMSYWLIN 757
           L+MMHSEDRESKRGL+DAV+DFLHKSGLKEEAG +WEVAAQKNVYPD+V+EK  SYWLIN
Sbjct: 695 LDMMHSEDRESKRGLMDAVIDFLHKSGLKEEAGFIWEVAAQKNVYPDSVREKSSSYWLIN 754

Query: 758 LHVMSDGTAVIALSRTLAWFRKQMLISGVGPSRIDIVTGWGRRSRVTGTSLVRQAVQELL 817
           LH+MS+GTAV ALSRTLAWF +Q+L  G GP RIDIVTGWGRRSRVTG+SLVRQ++Q+LL
Sbjct: 755 LHLMSEGTAVTALSRTLAWFHRQVLTLGTGPERIDIVTGWGRRSRVTGSSLVRQSIQKLL 814

Query: 818 HMFSFPFFTENGNSGCFVGCGEPLNKWLLQSYVDRMHLL 856
           ++F  PFFT  GN+GCFVGCGEPLNKWL   YV+RMHLL
Sbjct: 815 NLFESPFFTTRGNTGCFVGCGEPLNKWLHNPYVERMHLL 853


>gi|326490553|dbj|BAJ84940.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 856

 Score =  920 bits (2378), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 482/883 (54%), Positives = 603/883 (68%), Gaps = 54/883 (6%)

Query: 1   MLRAKHITNLSSTARSFFLNGSRCSASDGSSCTCSEDETCVSRRQHNAQMVYTPARAGVV 60
           MLRAK ++ L+  ARSF+L+GSRC ++DG+SCTC +D+ C S+RQ  + +     R+ V 
Sbjct: 1   MLRAKQLSTLTQCARSFYLSGSRCGSADGASCTCPDDDACGSKRQTASAI---ERRSSVK 57

Query: 61  VSGEAAK-----AAGLQKSERVSV-PSPSSLGRSDHVSYASSVDAVPKD--------VLT 106
           V   +A+     AAG    + V+V PS SS    D    +S+  + P +        V  
Sbjct: 58  VQPPSAQHVAGGAAGYPTHQAVNVIPSTSS---PDKEPASSNRGSHPGNRQVQGNNYVQP 114

Query: 107 SSPISDQFVKAGVAAVCFLSDLVNYKLPALDGS-------GTANSPTNFMVDPTRPLSNI 159
           S   +    ++G+A     ++LVN +  + +GS       G AN     +    +P SN 
Sbjct: 115 SKQAARGISQSGIAGAGVYNELVNLRPSSNNGSSKQAPQAGGANYSNKPLSSGGQPSSNN 174

Query: 160 KPANVKTIRRENVSKVYPNSSAESTVGSNPSTGYHNAKDK----GDNSNIARRFKRVSNA 215
           K  N  +   +N        +     GS P  GY+ AK K    G  + ++    +V N 
Sbjct: 175 KANNQHSHAGQNTPCAPSMQNDFGKGGSRP--GYY-AKPKQNFSGPAAAVSGSPSQVRNQ 231

Query: 216 SNGTSLETHNVSSDNSDRRRIVQPRSKAHSNRLNSNFKSNLQPSDAKVVECVSERFSKPS 275
            +     ++N   ++  R   VQ R          NF + +           S++   PS
Sbjct: 232 RHPNQGHSNNNGPNSDGRWAGVQTR----------NFSAPMTAYSGGP----SDKPQGPS 277

Query: 276 REMKIPAGLAPFS--RHFASTGNVVESVSRILRQWKWGPLAEEALGNTNYSMDAYQANQV 333
                  G  P S  R   S    VE     L+Q KWGP+ E  L      +DA+QANQV
Sbjct: 278 VGTMKGHGGGPQSNLRSLKSL-RAVEQYYHTLQQMKWGPMTEHVLDGLRCKIDAFQANQV 336

Query: 334 LKQLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQP 393
           LK L DH +ALGFF+WL+RQ GFKHD HTYTTM+GILG+A+QFG + KLLD+M    C+P
Sbjct: 337 LKLLHDHNIALGFFHWLKRQPGFKHDGHTYTTMIGILGQAKQFGTMRKLLDEMSSVNCKP 396

Query: 394 NVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMY 453
            VVTYNR+IH+YGRANYL EA+ VF++M+  G +PDRVTYCTLIDIHAK+G+L+VAMD+Y
Sbjct: 397 TVVTYNRIIHAYGRANYLREAVKVFEEMEGAGYQPDRVTYCTLIDIHAKSGYLEVAMDLY 456

Query: 454 KKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKA 513
            +MQ  GLSPDTFTYS ++NCLGK G L AA++LFCEM++ GC PNLVTYNI+IALQAKA
Sbjct: 457 GRMQEVGLSPDTFTYSAMVNCLGKGGQLAAAYKLFCEMIDNGCTPNLVTYNIIIALQAKA 516

Query: 514 RNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVY 573
           RNY + +KLYRDMQ AGF PDK+TYSIVMEVLGHCG+LDEAEAVF EMRR +W PDEPVY
Sbjct: 517 RNYDNVVKLYRDMQIAGFRPDKITYSIVMEVLGHCGHLDEAEAVFLEMRR-DWAPDEPVY 575

Query: 574 GLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLN 633
           GLLVDLWGKAGNV KA  WY AMLQ GL+PNVPTCNSLLSAFL++ +  DAY +LQ ML 
Sbjct: 576 GLLVDLWGKAGNVDKALGWYHAMLQDGLQPNVPTCNSLLSAFLKLNRFQDAYGVLQNMLA 635

Query: 634 LGLKPSLQTYTLLLSCCTEARSPYDMGFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDH 693
            GL PSLQTYTLLLSCCT+A +   MG C +LMA++GHPAHMFLL +P   P G+NVRDH
Sbjct: 636 QGLVPSLQTYTLLLSCCTDAHA--QMGLCCQLMAITGHPAHMFLLYLPDAEPGGENVRDH 693

Query: 694 VGSFLEMMHSEDRESKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAVKEKGMSY 753
              FL+MMHSEDRESKRG++DAV+DFLHKSGLKEEAG +WEVAAQ+NVYPD+V+EK  SY
Sbjct: 694 ARYFLDMMHSEDRESKRGIMDAVIDFLHKSGLKEEAGFIWEVAAQRNVYPDSVREKSSSY 753

Query: 754 WLINLHVMSDGTAVIALSRTLAWFRKQMLISGVGPSRIDIVTGWGRRSRVTGTSLVRQAV 813
           WLINLH+MS+GTAV ALSRTLAWF +QML+ G  P RIDIVTGWGRRSRVTG+SLVRQ++
Sbjct: 754 WLINLHLMSEGTAVTALSRTLAWFHRQMLLMGSCPERIDIVTGWGRRSRVTGSSLVRQSI 813

Query: 814 QELLHMFSFPFFTENGNSGCFVGCGEPLNKWLLQSYVDRMHLL 856
           ++LLH+F FP F   GN+GCFVGCGEPL++WL   YV+RMHLL
Sbjct: 814 EKLLHLFQFPLFAARGNTGCFVGCGEPLSQWLHNPYVERMHLL 856


>gi|125537564|gb|EAY84052.1| hypothetical protein OsI_39281 [Oryza sativa Indica Group]
          Length = 762

 Score =  773 bits (1996), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 409/782 (52%), Positives = 512/782 (65%), Gaps = 63/782 (8%)

Query: 1   MLRAKHITNLSSTARSFFLNGSRCSASDGSSCTCSEDETCVSRRQ---------HNAQMV 51
           MLRAK +  L+  ARSF++NGSRC ++DG+SCTC EDET   +RQ         H+ +  
Sbjct: 1   MLRAKQLGTLTQCARSFYVNGSRCGSTDGASCTCPEDETSAPKRQTANGIEQKFHSTRRP 60

Query: 52  YTPARAGVV--VSGEAAKAAGLQKSERVSVPS-------PSSLGRSDHVSYASSV--DAV 100
              A+   V  V G   +A G        VPS       P+S   S+H      +  D V
Sbjct: 61  SVKAQTPSVQHVVGSIGRATGYPAPAVHIVPSNSSQETEPASGNTSNHPRTPQVLGNDYV 120

Query: 101 PKDVLTSSPISDQFVKAGVAAVCFLSDLVNYKLPALDGSGTANSPTNFMVDPTRPLSNIK 160
                T+  IS     + +A     ++LVN K  + +G GT  +P        +PLS+ +
Sbjct: 121 QPSKQTARSIS----HSAIAGAGVYTELVNLKSTSNNG-GTNQAPQMATSYSYQPLSDAQ 175

Query: 161 PANVKTIRRENVSKVYPNSSAESTVGSNPSTGYHNAKDKGDNSNIARRFKRVSNASNGTS 220
           P+N+K+  +        +S  E+ +  NPS            +N+ +   R   A +  S
Sbjct: 176 PSNIKSHNQ--------HSLPEAKMPYNPSV----------QNNLGKGVSRSGYAKSNQS 217

Query: 221 LETHNVSSDNSDRRRIVQPRSKAHSNRLNSNFKSNLQPSDAKVVECVSERFSKPSR---- 276
                    NS      Q +++ H  + ++N+ SN   +DA+  E  ++  S P+     
Sbjct: 218 FSGPPAMVANSPS----QIKNQRHPGQRHTNYHSNNFSTDARWDEVQTQNLSAPAMYTGS 273

Query: 277 ---------EMKIPAGLAPFSRHFASTGNVVESVSRILRQWKWGPLAEEALGNTNYSMDA 327
                     +K   G    +     +   VE     L+Q KW P+    L N +  +DA
Sbjct: 274 GHKSQALAGTIKSHGGGPQSNLRSLKSLRSVEQYYHTLQQMKWVPMTGHVLDNLHCKIDA 333

Query: 328 YQANQVLKQLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMV 387
           +QANQVLK L DHT+ALGFF WL+RQ GFKHD H+YTTM+GILG+ARQFG + KLLD+M 
Sbjct: 334 FQANQVLKLLHDHTIALGFFQWLKRQPGFKHDGHSYTTMIGILGQARQFGTMRKLLDEMN 393

Query: 388 RDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLD 447
              C+P VVTYNR+IH+YGRANYL EA+ VF++MQ  G EPDRVTYCTLIDIHAK G+L+
Sbjct: 394 SVHCKPTVVTYNRIIHAYGRANYLREAVKVFEEMQKAGYEPDRVTYCTLIDIHAKGGYLE 453

Query: 448 VAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMI 507
           VAMD+Y +MQ  GLSPDTFTYS ++NCLGK GHL AA++LFCEMV  GC PNLVTYNIMI
Sbjct: 454 VAMDLYTRMQEVGLSPDTFTYSAMVNCLGKGGHLAAAYKLFCEMVENGCTPNLVTYNIMI 513

Query: 508 ALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWV 567
           ALQAKARNY++ +KLY+DMQ AGF PDK+TYSIVMEVLGHCG+LDEAEAVF EMR  +W 
Sbjct: 514 ALQAKARNYENVVKLYKDMQVAGFRPDKITYSIVMEVLGHCGHLDEAEAVFIEMRH-DWA 572

Query: 568 PDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHL 627
           PDEPVYGLLVDLWGKAGNV KA  WY AMLQ GL+PNVPTCNSLLSAFL++ +  DAY +
Sbjct: 573 PDEPVYGLLVDLWGKAGNVDKALGWYHAMLQDGLQPNVPTCNSLLSAFLKINRFQDAYSV 632

Query: 628 LQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGFCHELMAVSGHPAHMFLLSMPSPGPDG 687
           LQ ML  GL PSLQTYTLLLSCCTEA++   MG C +LMA++GHPAHMFLL +P   P G
Sbjct: 633 LQNMLAQGLVPSLQTYTLLLSCCTEAQA--QMGLCCQLMAITGHPAHMFLLYLPDAEPGG 690

Query: 688 QNVRDHVGSFLEMMHSEDRESKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAVK 747
           QNVRDH   FL+MMHSEDRESKRGL+DAV+DFLHKSGLKEEAG +WEVAAQ+NVYPD+V+
Sbjct: 691 QNVRDHTRYFLDMMHSEDRESKRGLMDAVIDFLHKSGLKEEAGFIWEVAAQRNVYPDSVR 750

Query: 748 EK 749
           EK
Sbjct: 751 EK 752


>gi|302808451|ref|XP_002985920.1| hypothetical protein SELMODRAFT_123132 [Selaginella moellendorffii]
 gi|300146427|gb|EFJ13097.1| hypothetical protein SELMODRAFT_123132 [Selaginella moellendorffii]
          Length = 574

 Score =  655 bits (1690), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 310/550 (56%), Positives = 398/550 (72%), Gaps = 1/550 (0%)

Query: 297 VVESVSRILRQWKWGPLAEEALGNTNYSMDAYQANQVLKQLQDHTVALGFFNWLRRQAGF 356
           +V  V  IL Q  WG     AL   N S++AYQ N++LKQ ++  VA  FF W R+QAGF
Sbjct: 4   LVARVCGILNQHGWGDETVRALAGLNASLNAYQVNEILKQQKEAGVAYNFFIWARKQAGF 63

Query: 357 KHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALD 416
           KHD HTYTT++GILGRA+ F  +N LLD+M+R+GC+PNVVTYNRLIH YGRAN L+ +L 
Sbjct: 64  KHDVHTYTTILGILGRAKSFDVLNNLLDEMIREGCEPNVVTYNRLIHCYGRANDLDSSLK 123

Query: 417 VFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLG 476
           +F  MQ+VGCEPDRVTYCTLID+ AKAGF D AM++Y++MQ AG  PDTFTYS+II+CLG
Sbjct: 124 LFNVMQMVGCEPDRVTYCTLIDLQAKAGFHDAAMELYRQMQHAGFRPDTFTYSIIIHCLG 183

Query: 477 KAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKV 536
           KAG L AA++LFCEM ++G  P+LVTYNI+I L AKA  +  ALKLY D+Q  G+ PD+V
Sbjct: 184 KAGKLNAAYKLFCEMTDRGYAPSLVTYNIIIDLHAKAGKFDMALKLYSDLQEVGYAPDRV 243

Query: 537 TYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAM 596
           TY I+MEVLG+CG++++AE VF EM R  WV D P++GL+VD+WGK GN  KA +W+  M
Sbjct: 244 TYGIIMEVLGNCGHIEDAEQVFEEMERAGWVADNPIFGLMVDMWGKTGNAEKAAQWFNRM 303

Query: 597 LQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSP 656
           L +GL+PNVP CNSLLSA+LR      A  +L GM   GL P+LQTYT LLS C   R+ 
Sbjct: 304 LDSGLQPNVPACNSLLSAYLRSSFYDAAGGVLGGMAKWGLYPTLQTYTSLLSSCAACRAA 363

Query: 657 YDMGFCHELMAVSGHPAHMFLLS-MPSPGPDGQNVRDHVGSFLEMMHSEDRESKRGLVDA 715
           ++      LM  +GHPAH F+ S + S G  G  +   +  F + M  E+ ES+RG  D+
Sbjct: 364 WEYDALFGLMGGTGHPAHPFVCSLLASGGTAGGTMVVGIRCFFDAMQFEELESRRGFADS 423

Query: 716 VVDFLHKSGLKEEAGSVWEVAAQKNVYPDAVKEKGMSYWLINLHVMSDGTAVIALSRTLA 775
           ++DFLH++G    AGSVWEVAA+KN+YP+AV+EK   YW INLHVMS GTA++AL+RTLA
Sbjct: 424 LIDFLHRAGKAVAAGSVWEVAAEKNLYPNAVREKAPQYWSINLHVMSTGTALVALARTLA 483

Query: 776 WFRKQMLISGVGPSRIDIVTGWGRRSRVTGTSLVRQAVQELLHMFSFPFFTENGNSGCFV 835
            F + ++ +G  P RIDI+TGWGRRSRV G SLV+QAV+ +L   + PF  +  N GCFV
Sbjct: 484 MFAEAVVRTGAAPYRIDIITGWGRRSRVPGASLVKQAVEGMLRSLNSPFHLDGLNVGCFV 543

Query: 836 GCGEPLNKWL 845
           G G  L +WL
Sbjct: 544 GQGPALAEWL 553


>gi|302806226|ref|XP_002984863.1| hypothetical protein SELMODRAFT_121207 [Selaginella moellendorffii]
 gi|300147449|gb|EFJ14113.1| hypothetical protein SELMODRAFT_121207 [Selaginella moellendorffii]
          Length = 564

 Score =  653 bits (1685), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 309/549 (56%), Positives = 397/549 (72%), Gaps = 4/549 (0%)

Query: 297 VVESVSRILRQWKWGPLAEEALGNTNYSMDAYQANQVLKQLQDHTVALGFFNWLRRQAGF 356
           +V  V  IL Q  WG     AL   N +++AYQ N++LKQ ++  VA  FF W R+QAGF
Sbjct: 4   LVARVCGILNQHGWGDETVRALAGLNANLNAYQVNEILKQQKEAGVAYNFFIWARKQAGF 63

Query: 357 KHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALD 416
           KHD HTYTT++GILGRA+ F  +N LLD+M+R+GC+PNVVTYNRLIH YGRAN L+ +L 
Sbjct: 64  KHDVHTYTTILGILGRAKSFDVLNNLLDEMIREGCEPNVVTYNRLIHCYGRANDLDSSLK 123

Query: 417 VFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLG 476
           +F  MQ+VGCEPDRVTYCTLID+ AKAGF D AMD+Y++MQ AG  PDTFTYS+II+CLG
Sbjct: 124 LFNVMQMVGCEPDRVTYCTLIDLQAKAGFHDAAMDLYRQMQHAGFRPDTFTYSIIIHCLG 183

Query: 477 KAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKV 536
           KAG L AA++LFCEM ++G  P+LVTYNI+I L AKA  +  ALKLY D+Q  G+ PD+V
Sbjct: 184 KAGKLNAAYKLFCEMTDRGYAPSLVTYNIIIDLHAKAGKFDMALKLYSDLQEVGYAPDRV 243

Query: 537 TYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAM 596
           TY I+MEVLG+CG++++AE VF EM R  WV D P++GL+VD+WGK GN  KA +W+  M
Sbjct: 244 TYGIIMEVLGNCGHIEDAEQVFEEMERAGWVADNPIFGLMVDMWGKTGNAEKAAQWFNRM 303

Query: 597 LQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSP 656
           L +GL+PNVP CNSLLSA+LR      A  +L GM   GL P+LQTYT LLS C   R+ 
Sbjct: 304 LDSGLQPNVPACNSLLSAYLRSSFYDAAGGVLGGMAKWGLYPTLQTYTSLLSSCAACRAA 363

Query: 657 YDMGFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRESKRGLVDAV 716
           ++      LM  +GHPAH F+ S+ + G     +R     F + M  E+ ES+RG  D++
Sbjct: 364 WEYDALFGLMGGTGHPAHPFVCSLLASGEMVVGIR----CFFDAMQFEELESRRGFADSL 419

Query: 717 VDFLHKSGLKEEAGSVWEVAAQKNVYPDAVKEKGMSYWLINLHVMSDGTAVIALSRTLAW 776
           +DFLH++G    AGSVWEVAA+KN+YP+AV+EK   YW INLHVMS GTA++AL+RTLA 
Sbjct: 420 IDFLHRAGKAVAAGSVWEVAAEKNLYPNAVREKAPQYWSINLHVMSTGTALVALARTLAM 479

Query: 777 FRKQMLISGVGPSRIDIVTGWGRRSRVTGTSLVRQAVQELLHMFSFPFFTENGNSGCFVG 836
           F + ++ +G  P RIDI+TGWGRRSRV G SLV+QAV+ +L   + PF  +  N GCFVG
Sbjct: 480 FAEAVVRTGAAPYRIDIITGWGRRSRVPGASLVKQAVEGMLRSLNSPFHLDGLNVGCFVG 539

Query: 837 CGEPLNKWL 845
            G  L +WL
Sbjct: 540 QGPALAEWL 548


>gi|168028441|ref|XP_001766736.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162681945|gb|EDQ68367.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 560

 Score =  623 bits (1607), Expect = e-175,   Method: Compositional matrix adjust.
 Identities = 301/562 (53%), Positives = 394/562 (70%), Gaps = 3/562 (0%)

Query: 295 GNVVESVSRILRQWKWGPLAEEALGNTNYSMDAYQANQVLKQLQDHTVALGFFNWLRRQA 354
           G VV+ V  ILRQ  W P    AL   N ++ A+  N+VLK  ++  +AL FF+W + Q 
Sbjct: 2   GEVVDHVCNILRQLNWRPDTLVALSRVNRTLSAFHINEVLKHQKESGLALKFFDWAKEQE 61

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           G+KHD  TYTTM+GI+GRAR F A ++LL +M R+GC+P VVTYNRLIH+YGRAN+L EA
Sbjct: 62  GYKHDVCTYTTMIGIMGRARNFEACSRLLQEMRREGCEPCVVTYNRLIHAYGRANFLGEA 121

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
           + +F QMQ  GC PDRVTYCTL+D+H+KAGF D AMDMY+KMQ AG  PDTFTYSVII+C
Sbjct: 122 MRIFYQMQEEGCSPDRVTYCTLVDLHSKAGFHDNAMDMYQKMQQAGFQPDTFTYSVIIHC 181

Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPD 534
           LGKAG +  A +LF EMV +G  P+LVTYNI+I LQAK+ NY  A+KLY DMQ+AGF PD
Sbjct: 182 LGKAGKVSEALKLFEEMVERGFAPSLVTYNIIIDLQAKSGNYVMAMKLYNDMQDAGFHPD 241

Query: 535 KVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYE 594
           +VTYSI+MEVLG  G+L EAE +F EM +  WVPD P+YG++VD+WGKA N  +A EWY+
Sbjct: 242 RVTYSIMMEVLGQIGHLQEAELMFNEMEQAGWVPDAPIYGVMVDMWGKARNAERALEWYQ 301

Query: 595 AMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEAR 654
            ML +GL PNV   NSLL ++LR+ Q   A+ +++ M   GL P+LQT+T+LLS CT + 
Sbjct: 302 KMLDSGLTPNVQISNSLLGSYLRMQQFDLAFGVIETMKAWGLVPTLQTHTILLSSCTASA 361

Query: 655 SPYDMGFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRESKRGLVD 714
             + +     LM  S    + F+ ++       Q ++  V  F E +H E+ + KRG  D
Sbjct: 362 QHHQVV---NLMHRSSETVYSFVCTLLLRQLPPQELKHIVQHFFESLHGEEHDCKRGFTD 418

Query: 715 AVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAVKEKGMSYWLINLHVMSDGTAVIALSRTL 774
           ++++FLH    + EAG VWEV  + N+YP AV+ K  + + INLHVMS GTA++ALSRTL
Sbjct: 419 SLIEFLHNLERRPEAGLVWEVGREHNLYPQAVRMKANNQYSINLHVMSMGTALVALSRTL 478

Query: 775 AWFRKQMLISGVGPSRIDIVTGWGRRSRVTGTSLVRQAVQELLHMFSFPFFTENGNSGCF 834
           + FR++ML +GV P RI+I+TGWG+ SRV G SLVRQAVQ LL     PF+ E+ N GCF
Sbjct: 479 SEFREKMLYTGVAPERIEIITGWGKHSRVPGASLVRQAVQNLLTALGSPFYVESSNVGCF 538

Query: 835 VGCGEPLNKWLLQSYVDRMHLL 856
           V  G+PL  WL Q +V+ M L 
Sbjct: 539 VSHGKPLQNWLHQPHVEHMLLF 560


>gi|224473925|gb|ACN49188.1| ATP binding protein [Triticum aestivum]
          Length = 352

 Score =  568 bits (1464), Expect = e-159,   Method: Compositional matrix adjust.
 Identities = 265/355 (74%), Positives = 304/355 (85%), Gaps = 3/355 (0%)

Query: 502 TYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEM 561
           TYNI+IALQAKARNY + +KLYRDMQ AGF PDK+TYSIVMEVLGHCG+LDEAEAVF EM
Sbjct: 1   TYNIIIALQAKARNYDNVVKLYRDMQIAGFRPDKITYSIVMEVLGHCGHLDEAEAVFLEM 60

Query: 562 RRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQL 621
           RR +W PDEPVYGLLVDLWGKAGNV KA  WY AMLQ GL+PNVPTCNSLLSAFL++ + 
Sbjct: 61  RR-DWAPDEPVYGLLVDLWGKAGNVDKALGWYHAMLQDGLQPNVPTCNSLLSAFLKLNRF 119

Query: 622 SDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGFCHELMAVSGHPAHMFLLSMP 681
            DAY +LQ ML  GL PSLQTYTLLLSCCT+A +   MG C +LMA++GHPAHMFLL +P
Sbjct: 120 QDAYSVLQNMLAQGLVPSLQTYTLLLSCCTDAHA--SMGLCCQLMAITGHPAHMFLLYLP 177

Query: 682 SPGPDGQNVRDHVGSFLEMMHSEDRESKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNV 741
              P G+NVRDH   FL+MMHSEDRESKRG++DAV+DFLHKSGLKEEAG +WEVAAQKNV
Sbjct: 178 DAEPGGENVRDHARYFLDMMHSEDRESKRGIMDAVIDFLHKSGLKEEAGFIWEVAAQKNV 237

Query: 742 YPDAVKEKGMSYWLINLHVMSDGTAVIALSRTLAWFRKQMLISGVGPSRIDIVTGWGRRS 801
           YPD+V+EK  SYWLINLH+MS+GTAV ALSRTLAWF +QML+ G  P RIDIVTGWGRRS
Sbjct: 238 YPDSVREKSSSYWLINLHLMSEGTAVTALSRTLAWFHRQMLLMGSCPERIDIVTGWGRRS 297

Query: 802 RVTGTSLVRQAVQELLHMFSFPFFTENGNSGCFVGCGEPLNKWLLQSYVDRMHLL 856
           RVTG+SLVRQ++++LLH+F FP F   GN+GCFVGCGEPL++WL   YV+RMHLL
Sbjct: 298 RVTGSSLVRQSIEKLLHLFQFPLFAARGNTGCFVGCGEPLSQWLHNPYVERMHLL 352



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 47/146 (32%), Positives = 70/146 (47%), Gaps = 1/146 (0%)

Query: 432 TYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEM 491
           TY  +I + AKA   D  + +Y+ MQ AG  PD  TYS+++  LG  GHL  A  +F EM
Sbjct: 1   TYNIIIALQAKARNYDNVVKLYRDMQIAGFRPDKITYSIVMEVLGHCGHLDEAEAVFLEM 60

Query: 492 VNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYL 551
             +   P+   Y +++ L  KA N   AL  Y  M   G +P+  T + ++         
Sbjct: 61  -RRDWAPDEPVYGLLVDLWGKAGNVDKALGWYHAMLQDGLQPNVPTCNSLLSAFLKLNRF 119

Query: 552 DEAEAVFAEMRRKNWVPDEPVYGLLV 577
            +A +V   M  +  VP    Y LL+
Sbjct: 120 QDAYSVLQNMLAQGLVPSLQTYTLLL 145



 Score = 80.9 bits (198), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 44/147 (29%), Positives = 78/147 (53%), Gaps = 1/147 (0%)

Query: 362 TYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQM 421
           TY  ++ +  +AR +  + KL   M   G +P+ +TY+ ++   G   +L+EA  VF +M
Sbjct: 1   TYNIIIALQAKARNYDNVVKLYRDMQIAGFRPDKITYSIVMEVLGHCGHLDEAEAVFLEM 60

Query: 422 QVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHL 481
           +     PD   Y  L+D+  KAG +D A+  Y  M   GL P+  T + +++   K    
Sbjct: 61  RR-DWAPDEPVYGLLVDLWGKAGNVDKALGWYHAMLQDGLQPNVPTCNSLLSAFLKLNRF 119

Query: 482 QAAHQLFCEMVNQGCIPNLVTYNIMIA 508
           Q A+ +   M+ QG +P+L TY ++++
Sbjct: 120 QDAYSVLQNMLAQGLVPSLQTYTLLLS 146



 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 51/217 (23%), Positives = 97/217 (44%), Gaps = 5/217 (2%)

Query: 354 AGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNE 413
           AGF+ D+ TY+ ++ +LG          +  +M RD   P+   Y  L+  +G+A  +++
Sbjct: 28  AGFRPDKITYSIVMEVLGHCGHLDEAEAVFLEMRRDWA-PDEPVYGLLVDLWGKAGNVDK 86

Query: 414 ALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIIN 473
           AL  +  M   G +P+  T  +L+    K      A  + + M A GL P   TY+++++
Sbjct: 87  ALGWYHAMLQDGLQPNVPTCNSLLSAFLKLNRFQDAYSVLQNMLAQGLVPSLQTYTLLLS 146

Query: 474 CLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNA-GFE 532
           C   A    A+  L C+++     P  +    +   +    N +   + + DM ++   E
Sbjct: 147 CCTDA---HASMGLCCQLMAITGHPAHMFLLYLPDAEPGGENVRDHARYFLDMMHSEDRE 203

Query: 533 PDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPD 569
             +     V++ L   G  +EA  ++    +KN  PD
Sbjct: 204 SKRGIMDAVIDFLHKSGLKEEAGFIWEVAAQKNVYPD 240


>gi|326492688|dbj|BAJ90200.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 325

 Score =  522 bits (1344), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 243/328 (74%), Positives = 280/328 (85%), Gaps = 3/328 (0%)

Query: 529 AGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRK 588
           AGF PDK+TYSIVMEVLGHCG+LDEAEAVF EMRR +W PDEPVYGLLVDLWGKAGNV K
Sbjct: 1   AGFRPDKITYSIVMEVLGHCGHLDEAEAVFLEMRR-DWAPDEPVYGLLVDLWGKAGNVDK 59

Query: 589 AWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
           A  WY AMLQ GL+PNVPTCNSLLSAFL++ +  DAY +LQ ML  GL PSLQTYTLLLS
Sbjct: 60  ALGWYHAMLQDGLQPNVPTCNSLLSAFLKLNRFQDAYGVLQNMLAQGLVPSLQTYTLLLS 119

Query: 649 CCTEARSPYDMGFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRES 708
           CCT+A +   MG C +LMA++GHPAHMFLL +P   P G+NVRDH   FL+MMHSEDRES
Sbjct: 120 CCTDAHA--QMGLCCQLMAITGHPAHMFLLYLPDAEPGGENVRDHARYFLDMMHSEDRES 177

Query: 709 KRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAVKEKGMSYWLINLHVMSDGTAVI 768
           KRG++DAV+DFLHKSGLKEEAG +WEVAAQ+NVYPD+V+EK  SYWLINLH+MS+GTAV 
Sbjct: 178 KRGIMDAVIDFLHKSGLKEEAGFIWEVAAQRNVYPDSVREKSSSYWLINLHLMSEGTAVT 237

Query: 769 ALSRTLAWFRKQMLISGVGPSRIDIVTGWGRRSRVTGTSLVRQAVQELLHMFSFPFFTEN 828
           ALSRTLAWF +QML+ G  P RIDIVTGWGRRSRVTG+SLVRQ++++LLH+F FP F   
Sbjct: 238 ALSRTLAWFHRQMLLMGSCPERIDIVTGWGRRSRVTGSSLVRQSIEKLLHLFQFPLFAAR 297

Query: 829 GNSGCFVGCGEPLNKWLLQSYVDRMHLL 856
           GN+GCFVGCGEPL++WL   YV+RMHLL
Sbjct: 298 GNTGCFVGCGEPLSQWLHNPYVERMHLL 325



 Score = 68.6 bits (166), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 37/119 (31%), Positives = 65/119 (54%), Gaps = 1/119 (0%)

Query: 390 GCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVA 449
           G +P+ +TY+ ++   G   +L+EA  VF +M+     PD   Y  L+D+  KAG +D A
Sbjct: 2   GFRPDKITYSIVMEVLGHCGHLDEAEAVFLEMRR-DWAPDEPVYGLLVDLWGKAGNVDKA 60

Query: 450 MDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIA 508
           +  Y  M   GL P+  T + +++   K    Q A+ +   M+ QG +P+L TY ++++
Sbjct: 61  LGWYHAMLQDGLQPNVPTCNSLLSAFLKLNRFQDAYGVLQNMLAQGLVPSLQTYTLLLS 119



 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 32/118 (27%), Positives = 63/118 (53%), Gaps = 1/118 (0%)

Query: 425 GCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAA 484
           G  PD++TY  ++++    G LD A  ++ +M+    +PD   Y ++++  GKAG++  A
Sbjct: 2   GFRPDKITYSIVMEVLGHCGHLDEAEAVFLEMRR-DWAPDEPVYGLLVDLWGKAGNVDKA 60

Query: 485 HQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVM 542
              +  M+  G  PN+ T N +++   K   +Q A  + ++M   G  P   TY++++
Sbjct: 61  LGWYHAMLQDGLQPNVPTCNSLLSAFLKLNRFQDAYGVLQNMLAQGLVPSLQTYTLLL 118



 Score = 60.8 bits (146), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 50/217 (23%), Positives = 96/217 (44%), Gaps = 5/217 (2%)

Query: 354 AGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNE 413
           AGF+ D+ TY+ ++ +LG          +  +M RD   P+   Y  L+  +G+A  +++
Sbjct: 1   AGFRPDKITYSIVMEVLGHCGHLDEAEAVFLEMRRDWA-PDEPVYGLLVDLWGKAGNVDK 59

Query: 414 ALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIIN 473
           AL  +  M   G +P+  T  +L+    K      A  + + M A GL P   TY+++++
Sbjct: 60  ALGWYHAMLQDGLQPNVPTCNSLLSAFLKLNRFQDAYGVLQNMLAQGLVPSLQTYTLLLS 119

Query: 474 CLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNA-GFE 532
           C   A    A   L C+++     P  +    +   +    N +   + + DM ++   E
Sbjct: 120 CCTDA---HAQMGLCCQLMAITGHPAHMFLLYLPDAEPGGENVRDHARYFLDMMHSEDRE 176

Query: 533 PDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPD 569
             +     V++ L   G  +EA  ++    ++N  PD
Sbjct: 177 SKRGIMDAVIDFLHKSGLKEEAGFIWEVAAQRNVYPD 213


>gi|295828472|gb|ADG37905.1| AT1G18900-like protein [Capsella grandiflora]
 gi|295828474|gb|ADG37906.1| AT1G18900-like protein [Capsella grandiflora]
 gi|295828476|gb|ADG37907.1| AT1G18900-like protein [Capsella grandiflora]
 gi|295828478|gb|ADG37908.1| AT1G18900-like protein [Capsella grandiflora]
          Length = 207

 Score =  360 bits (925), Expect = 1e-96,   Method: Compositional matrix adjust.
 Identities = 166/207 (80%), Positives = 185/207 (89%)

Query: 574 GLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLN 633
           GLLVDLWGKAGNV KAW+WY+AML AGL PNVPTCNSLLS FLRV ++++AY LLQ ML 
Sbjct: 1   GLLVDLWGKAGNVEKAWQWYQAMLHAGLLPNVPTCNSLLSTFLRVNKIAEAYDLLQNMLA 60

Query: 634 LGLKPSLQTYTLLLSCCTEARSPYDMGFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDH 693
           LGL+PSLQTYTLLLSCCT+ RS  DMGFC +LMA +GHPAHMFLL MP+ GPDGQNVR+H
Sbjct: 61  LGLRPSLQTYTLLLSCCTDGRSKLDMGFCGQLMASTGHPAHMFLLKMPAAGPDGQNVRNH 120

Query: 694 VGSFLEMMHSEDRESKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAVKEKGMSY 753
             +FL +MHSEDRESKRGLVDAVVDFLHKSG KEEAGSVWEVAAQKNV+PDA++EK  SY
Sbjct: 121 ANNFLNLMHSEDRESKRGLVDAVVDFLHKSGQKEEAGSVWEVAAQKNVFPDALREKSSSY 180

Query: 754 WLINLHVMSDGTAVIALSRTLAWFRKQ 780
           WLINLHVMS+GTA+ ALSRTLAWFRKQ
Sbjct: 181 WLINLHVMSEGTAITALSRTLAWFRKQ 207



 Score = 44.7 bits (104), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 23/91 (25%), Positives = 46/91 (50%), Gaps = 9/91 (9%)

Query: 470 VIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNA 529
           ++++  GKAG+++ A Q +  M++ G +PN+ T N +++   +      A  L ++M   
Sbjct: 2   LLVDLWGKAGNVEKAWQWYQAMLHAGLLPNVPTCNSLLSTFLRVNKIAEAYDLLQNMLAL 61

Query: 530 GFEPDKVTYSIVMEV---------LGHCGYL 551
           G  P   TY++++           +G CG L
Sbjct: 62  GLRPSLQTYTLLLSCCTDGRSKLDMGFCGQL 92



 Score = 42.7 bits (99), Expect = 0.90,   Method: Compositional matrix adjust.
 Identities = 22/72 (30%), Positives = 35/72 (48%)

Query: 366 MVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVG 425
           +V + G+A       +    M+  G  PNV T N L+ ++ R N + EA D+ + M  +G
Sbjct: 3   LVDLWGKAGNVEKAWQWYQAMLHAGLLPNVPTCNSLLSTFLRVNKIAEAYDLLQNMLALG 62

Query: 426 CEPDRVTYCTLI 437
             P   TY  L+
Sbjct: 63  LRPSLQTYTLLL 74



 Score = 42.0 bits (97), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 22/80 (27%), Positives = 42/80 (52%)

Query: 436 LIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQG 495
           L+D+  KAG ++ A   Y+ M  AGL P+  T + +++   +   +  A+ L   M+  G
Sbjct: 3   LVDLWGKAGNVEKAWQWYQAMLHAGLLPNVPTCNSLLSTFLRVNKIAEAYDLLQNMLALG 62

Query: 496 CIPNLVTYNIMIALQAKARN 515
             P+L TY ++++     R+
Sbjct: 63  LRPSLQTYTLLLSCCTDGRS 82



 Score = 40.4 bits (93), Expect = 3.7,   Method: Compositional matrix adjust.
 Identities = 43/183 (23%), Positives = 74/183 (40%), Gaps = 28/183 (15%)

Query: 401 LIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAG 460
           L+  +G+A  + +A   ++ M   G  P+  T  +L+    +   +  A D+ + M A G
Sbjct: 3   LVDLWGKAGNVEKAWQWYQAMLHAGLLPNVPTCNSLLSTFLRVNKIAEAYDLLQNMLALG 62

Query: 461 LSPDTFTYSVIINC---------LGKAGHLQA-----AHQLFCEMVNQGCIPNLVTYNIM 506
           L P   TY+++++C         +G  G L A     AH    +M   G  P+       
Sbjct: 63  LRPSLQTYTLLLSCCTDGRSKLDMGFCGQLMASTGHPAHMFLLKMPAAG--PD------- 113

Query: 507 IALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNW 566
                  RN+  A      M +   E  +     V++ L   G  +EA +V+    +KN 
Sbjct: 114 ---GQNVRNH--ANNFLNLMHSEDRESKRGLVDAVVDFLHKSGQKEEAGSVWEVAAQKNV 168

Query: 567 VPD 569
            PD
Sbjct: 169 FPD 171


>gi|295828480|gb|ADG37909.1| AT1G18900-like protein [Neslia paniculata]
          Length = 207

 Score =  360 bits (924), Expect = 2e-96,   Method: Compositional matrix adjust.
 Identities = 166/207 (80%), Positives = 185/207 (89%)

Query: 574 GLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLN 633
           GLLVDLWGKAGNV KAW+WY+AML AGL PNVPTCNSLLS FLRV ++++AY LLQ ML 
Sbjct: 1   GLLVDLWGKAGNVEKAWQWYQAMLHAGLLPNVPTCNSLLSTFLRVNKIAEAYELLQNMLA 60

Query: 634 LGLKPSLQTYTLLLSCCTEARSPYDMGFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDH 693
           LGL+PSLQTYTLLLSCCT+ RS  +MGFC +LMA +GHPAHMFLL MP+ GPDGQNVR+H
Sbjct: 61  LGLRPSLQTYTLLLSCCTDGRSKLEMGFCGQLMASTGHPAHMFLLKMPAAGPDGQNVRNH 120

Query: 694 VGSFLEMMHSEDRESKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAVKEKGMSY 753
             SFL +MHSEDRESKRGLVDAVVDFLHKSG KEEAGSVWEVAAQKNV+PDA++EK  SY
Sbjct: 121 ANSFLNLMHSEDRESKRGLVDAVVDFLHKSGQKEEAGSVWEVAAQKNVFPDALREKSSSY 180

Query: 754 WLINLHVMSDGTAVIALSRTLAWFRKQ 780
           WLINLHVMS+GTAV ALS+TLAWFRKQ
Sbjct: 181 WLINLHVMSEGTAVTALSKTLAWFRKQ 207



 Score = 45.4 bits (106), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 23/91 (25%), Positives = 47/91 (51%), Gaps = 9/91 (9%)

Query: 470 VIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNA 529
           ++++  GKAG+++ A Q +  M++ G +PN+ T N +++   +      A +L ++M   
Sbjct: 2   LLVDLWGKAGNVEKAWQWYQAMLHAGLLPNVPTCNSLLSTFLRVNKIAEAYELLQNMLAL 61

Query: 530 GFEPDKVTYSIVMEV---------LGHCGYL 551
           G  P   TY++++           +G CG L
Sbjct: 62  GLRPSLQTYTLLLSCCTDGRSKLEMGFCGQL 92



 Score = 43.1 bits (100), Expect = 0.72,   Method: Compositional matrix adjust.
 Identities = 22/80 (27%), Positives = 43/80 (53%)

Query: 436 LIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQG 495
           L+D+  KAG ++ A   Y+ M  AGL P+  T + +++   +   +  A++L   M+  G
Sbjct: 3   LVDLWGKAGNVEKAWQWYQAMLHAGLLPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALG 62

Query: 496 CIPNLVTYNIMIALQAKARN 515
             P+L TY ++++     R+
Sbjct: 63  LRPSLQTYTLLLSCCTDGRS 82


>gi|345288823|gb|AEN80903.1| AT1G18900-like protein, partial [Capsella rubella]
 gi|345288825|gb|AEN80904.1| AT1G18900-like protein, partial [Capsella rubella]
 gi|345288827|gb|AEN80905.1| AT1G18900-like protein, partial [Capsella rubella]
 gi|345288829|gb|AEN80906.1| AT1G18900-like protein, partial [Capsella rubella]
 gi|345288831|gb|AEN80907.1| AT1G18900-like protein, partial [Capsella rubella]
 gi|345288833|gb|AEN80908.1| AT1G18900-like protein, partial [Capsella rubella]
 gi|345288835|gb|AEN80909.1| AT1G18900-like protein, partial [Capsella rubella]
 gi|345288837|gb|AEN80910.1| AT1G18900-like protein, partial [Capsella rubella]
          Length = 202

 Score =  348 bits (892), Expect = 1e-92,   Method: Compositional matrix adjust.
 Identities = 161/202 (79%), Positives = 180/202 (89%)

Query: 574 GLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLN 633
           GLLVDLWGKAGNV KAW+WY+AML AGL PNVPTCNSLLS FLRV ++++AY LLQ ML 
Sbjct: 1   GLLVDLWGKAGNVEKAWQWYQAMLHAGLLPNVPTCNSLLSTFLRVNKIAEAYDLLQNMLA 60

Query: 634 LGLKPSLQTYTLLLSCCTEARSPYDMGFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDH 693
           LGL+PSLQTYTLLLSCCT+ RS  DMGFC +LMA +GHPAHMFLL MP+ GPDGQNVR+H
Sbjct: 61  LGLRPSLQTYTLLLSCCTDGRSKLDMGFCGQLMASTGHPAHMFLLKMPAAGPDGQNVRNH 120

Query: 694 VGSFLEMMHSEDRESKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAVKEKGMSY 753
             +FL +MHSEDRESKRGLVDAVVDFLHKSG KEEAGSVWEVAAQKNV+PDA++EK  SY
Sbjct: 121 ANNFLNLMHSEDRESKRGLVDAVVDFLHKSGQKEEAGSVWEVAAQKNVFPDALREKSSSY 180

Query: 754 WLINLHVMSDGTAVIALSRTLA 775
           WLINLHVMS+GTA+ ALSRTLA
Sbjct: 181 WLINLHVMSEGTAITALSRTLA 202



 Score = 44.3 bits (103), Expect = 0.29,   Method: Compositional matrix adjust.
 Identities = 23/91 (25%), Positives = 46/91 (50%), Gaps = 9/91 (9%)

Query: 470 VIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNA 529
           ++++  GKAG+++ A Q +  M++ G +PN+ T N +++   +      A  L ++M   
Sbjct: 2   LLVDLWGKAGNVEKAWQWYQAMLHAGLLPNVPTCNSLLSTFLRVNKIAEAYDLLQNMLAL 61

Query: 530 GFEPDKVTYSIVMEV---------LGHCGYL 551
           G  P   TY++++           +G CG L
Sbjct: 62  GLRPSLQTYTLLLSCCTDGRSKLDMGFCGQL 92



 Score = 42.4 bits (98), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 22/72 (30%), Positives = 35/72 (48%)

Query: 366 MVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVG 425
           +V + G+A       +    M+  G  PNV T N L+ ++ R N + EA D+ + M  +G
Sbjct: 3   LVDLWGKAGNVEKAWQWYQAMLHAGLLPNVPTCNSLLSTFLRVNKIAEAYDLLQNMLALG 62

Query: 426 CEPDRVTYCTLI 437
             P   TY  L+
Sbjct: 63  LRPSLQTYTLLL 74



 Score = 41.6 bits (96), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 22/80 (27%), Positives = 42/80 (52%)

Query: 436 LIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQG 495
           L+D+  KAG ++ A   Y+ M  AGL P+  T + +++   +   +  A+ L   M+  G
Sbjct: 3   LVDLWGKAGNVEKAWQWYQAMLHAGLLPNVPTCNSLLSTFLRVNKIAEAYDLLQNMLALG 62

Query: 496 CIPNLVTYNIMIALQAKARN 515
             P+L TY ++++     R+
Sbjct: 63  LRPSLQTYTLLLSCCTDGRS 82



 Score = 40.4 bits (93), Expect = 3.8,   Method: Compositional matrix adjust.
 Identities = 43/183 (23%), Positives = 74/183 (40%), Gaps = 28/183 (15%)

Query: 401 LIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAG 460
           L+  +G+A  + +A   ++ M   G  P+  T  +L+    +   +  A D+ + M A G
Sbjct: 3   LVDLWGKAGNVEKAWQWYQAMLHAGLLPNVPTCNSLLSTFLRVNKIAEAYDLLQNMLALG 62

Query: 461 LSPDTFTYSVIINC---------LGKAGHLQA-----AHQLFCEMVNQGCIPNLVTYNIM 506
           L P   TY+++++C         +G  G L A     AH    +M   G  P+       
Sbjct: 63  LRPSLQTYTLLLSCCTDGRSKLDMGFCGQLMASTGHPAHMFLLKMPAAG--PD------- 113

Query: 507 IALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNW 566
                  RN+  A      M +   E  +     V++ L   G  +EA +V+    +KN 
Sbjct: 114 ---GQNVRNH--ANNFLNLMHSEDRESKRGLVDAVVDFLHKSGQKEEAGSVWEVAAQKNV 168

Query: 567 VPD 569
            PD
Sbjct: 169 FPD 171


>gi|302755642|ref|XP_002961245.1| hypothetical protein SELMODRAFT_70140 [Selaginella moellendorffii]
 gi|300172184|gb|EFJ38784.1| hypothetical protein SELMODRAFT_70140 [Selaginella moellendorffii]
          Length = 489

 Score =  235 bits (599), Expect = 8e-59,   Method: Compositional matrix adjust.
 Identities = 148/494 (29%), Positives = 242/494 (48%), Gaps = 10/494 (2%)

Query: 328 YQANQVLKQLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMV 387
           YQ  +VLK+++D  VAL FF W +    FKHD   Y+ M+ +LG    +    KL D+M 
Sbjct: 1   YQVCEVLKRVRDWRVALEFFTWAKSVPFFKHDAMNYSMMIRVLGTCGNYTQGRKLFDEMR 60

Query: 388 RDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLD 447
             G +P++VT N +I  YG AN +++A+D+F++    G EPD  TY  LID+  KAG + 
Sbjct: 61  EKGLKPDLVTVNNMIKCYGSANRMDDAMDLFREFPDFGFEPDVCTYALLIDLLGKAGRVS 120

Query: 448 VAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMI 507
               ++ ++Q+  L PD + ++ +I    K   L  A +    M   G  P+ VTY I++
Sbjct: 121 EVRKLFLELQSRKLKPDEYVFNSMIANFSKWKDLGLADEALDYMKVCGIRPSTVTYAIVL 180

Query: 508 ALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWV 567
            + AK+ N+  A K+Y +  N+   PD   Y+  +   G  G   EAE    ++ +   V
Sbjct: 181 NMYAKSLNFMLAEKIYCEYLNSNLPPDLYVYNNAILFFGLAGRCREAEWAVEDIEKAGLV 240

Query: 568 PDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHL 627
           PD+  Y  ++  W + G    A +W++     G+ P+   CN+L+ A+++   L     +
Sbjct: 241 PDKFSYCTIISAWARQGCAPDAKKWFDKARSRGITPSPEMCNALIDAYIKALDLEPVAGI 300

Query: 628 LQGMLNLGLKPSLQTYTLLLS----CCTEARSPYDMGFCHELMAVSGHPAHMFLLSMPSP 683
           L  M   G+K +LQTYT L +    CC E      +    + M  +GHPA  FL  +   
Sbjct: 301 LDAMPGWGVKATLQTYTYLFNYYCECCKEY-----VDLLRDYMRKTGHPADKFLEDVLGG 355

Query: 684 GPDGQNVRDHVGSFLEMMHSEDRESKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYP 743
               Q +R     F + +  E         DA+V +L   G + EA  ++  AA   ++ 
Sbjct: 356 KVPLQELRRVSQRFFDSLRLERSGWASKFADALVHYLQTYGYEAEAHEIFAAAAATRLFR 415

Query: 744 DAVKEKGMSYWLINLHVMSDGTAVIALSRTLAWFRKQMLIS-GVGPSRIDIVTGWGRRSR 802
             + E    +W I L  M +GTA++ L + L   R+++       P+   +VTG+G+   
Sbjct: 416 RNLWENANDHWFIWLVDMDEGTALVGLKQGLLISREKLRNEPARRPAMATVVTGFGKHRE 475

Query: 803 VTGTSLVRQAVQEL 816
                 VR A++EL
Sbjct: 476 TRSALAVRSALEEL 489


>gi|302772122|ref|XP_002969479.1| hypothetical protein SELMODRAFT_61155 [Selaginella moellendorffii]
 gi|300162955|gb|EFJ29567.1| hypothetical protein SELMODRAFT_61155 [Selaginella moellendorffii]
          Length = 489

 Score =  234 bits (596), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 148/494 (29%), Positives = 241/494 (48%), Gaps = 10/494 (2%)

Query: 328 YQANQVLKQLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMV 387
           YQ  +VLK+++D  VAL FF W +    FKHD   Y+ M+ +LG    +    KL D+M 
Sbjct: 1   YQVCEVLKRVRDWRVALEFFTWAKSVPFFKHDAMNYSMMIRVLGTCGNYTQGRKLFDEMR 60

Query: 388 RDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLD 447
             G +P++VT N +I  YG AN +++A+D+F++    G EPD  TY  LID+  KAG + 
Sbjct: 61  EKGLKPDLVTVNNMIKCYGCANRVDDAMDLFREFPDFGFEPDVCTYALLIDLLGKAGRVS 120

Query: 448 VAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMI 507
               ++ ++Q+  L PD + ++ +I    K   L  A +    M   G  P+ VTY I++
Sbjct: 121 EVRKLFLELQSRKLKPDEYVFNSMIANFSKWKDLGLADEALDYMKVCGIRPSTVTYAIVL 180

Query: 508 ALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWV 567
            + AK+ N+  A K+Y +  N+   PD   Y+  +   G  G   EAE    ++ +   V
Sbjct: 181 NMYAKSLNFMLAEKIYCEYLNSNLPPDLYVYNNAILFFGLAGRCREAEWAVEDIEKAGLV 240

Query: 568 PDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHL 627
           PD+  Y  ++  W + G    A +W++     G+ P+   CN+L+ A+++   L     +
Sbjct: 241 PDKFSYCTIISAWARQGCAPDAKKWFDKARSRGITPSPEMCNALIDAYIKALDLEPVAAI 300

Query: 628 LQGMLNLGLKPSLQTYTLLLS----CCTEARSPYDMGFCHELMAVSGHPAHMFLLSMPSP 683
           L  M   G+K +LQTYT L +    CC E      +    + M  +GHPA  FL  +   
Sbjct: 301 LDAMPGWGVKATLQTYTYLFNYYCECCKEY-----VDLLRDYMRKTGHPADKFLEDVLGG 355

Query: 684 GPDGQNVRDHVGSFLEMMHSEDRESKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYP 743
               Q +R     F + +  E         DA+V +L   G + EA  ++  AA   ++ 
Sbjct: 356 KVPLQQLRRVSQRFFDSLRLERSGWASKFADALVHYLQTYGYEAEAHEIFAAAAATRLFR 415

Query: 744 DAVKEKGMSYWLINLHVMSDGTAVIALSRTLAWFRKQMLIS-GVGPSRIDIVTGWGRRSR 802
             + E    +W I L  M +GTA++ L + L   R ++       P+   +VTG+G+   
Sbjct: 416 RNLWENANDHWFIWLVDMDEGTALVGLKQGLLISRDKLRKEPARRPAMATVVTGFGKHRE 475

Query: 803 VTGTSLVRQAVQEL 816
                 VR A++EL
Sbjct: 476 TRSALAVRSALEEL 489


>gi|302798857|ref|XP_002981188.1| hypothetical protein SELMODRAFT_420654 [Selaginella moellendorffii]
 gi|300151242|gb|EFJ17889.1| hypothetical protein SELMODRAFT_420654 [Selaginella moellendorffii]
          Length = 796

 Score =  222 bits (565), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 162/668 (24%), Positives = 286/668 (42%), Gaps = 116/668 (17%)

Query: 293 STGNVVESVSRILRQWKWGPLAEEALGNTNYSMDAYQANQVLKQLQDHTVALGFFNWLRR 352
           S  +++  +  ++R+  W P  E  L   +     +  N+VLK +Q+  VA GFF W+RR
Sbjct: 68  SNADLISKILYVVRRPYWSPEVERELQLLDIRPSEFHINEVLKNIQEPDVANGFFQWIRR 127

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQ-------------------- 392
           Q  +    ++++ ++   GR + F A+ ++L  +  D C                     
Sbjct: 128 QKWYVPSTYSFSILLNTYGRGKDFQAVQRVLSDLKADKCPMTTVAYNTLIKVYGKAHKLD 187

Query: 393 ---------------PNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGC----------- 426
                          P++ T+N L+  Y  A    + L+V+ +MQ +GC           
Sbjct: 188 EAWGYYKEMQDSRCVPDIFTFNTLMSLYSYAGQSEKVLEVYDEMQKIGCSLDRVGYEVVV 247

Query: 427 ------------------------EPDRVTY----------------------------- 433
                                   +P+ V Y                             
Sbjct: 248 PHAGKVGRLDLACMLFERMKAEGHQPNAVAYSALIAGQLKSGRLEIGTKYFEEMRSLEIR 307

Query: 434 ------CTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQL 487
                  +LI+ + K+G L+  +  +K M+A    P+   Y+ +++   KAG L AA + 
Sbjct: 308 PLLGTFASLIEAYCKSGRLETGLKFFKDMEAFNYKPNLCIYAALVDAHAKAGMLDAALEF 367

Query: 488 FCEMVNQGC-IPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLG 546
           +  M   G  +P L+ + ++I   A+A   ++A++LYR+M+  G  P   T  IV+  + 
Sbjct: 368 YERMRGVGLWLPPLI-FAVLIEQHAQAGKAETAVRLYREMRGVGLRPSHFTCRIVVGAVA 426

Query: 547 HCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVP 606
             G  D+ E +  EM+       + V   +V L      +  AWE +  +   G  P+V 
Sbjct: 427 KGGKYDDVERILFEMQEMGLNVADAVNDSIVKLVDDK-RISDAWELFLKVTGHGFTPHVS 485

Query: 607 TCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGFCHELM 666
            C  +L  FL  G +  A  +L  M   G    L+TY +LL                  M
Sbjct: 486 LCREILHGFLSCGDMEHARQMLSFMQRPGSAVDLRTYCMLLEFFLRGSRLEHEEVVMSFM 545

Query: 667 AVSGHPAHMFLLSM--PSPGPDGQNVRDHVGSFLEMMHSE-DRESKRGLVDAVVDFLHKS 723
             + HPAH FL  +   S   +GQ++ D++ SF   + +E D +++R L + ++++L   
Sbjct: 546 RETKHPAHSFLCGLMGSSKHRNGQSLADYIKSFYSELEAEVDFKTRRYLTNVLLNYLVVM 605

Query: 724 GLKEEAGSVWEVAAQKNVYPDAVKEKGMSYWLINLHVMSDGTAVIALSRTLAWFRKQMLI 783
           G + +A S W+V  Q ++YP+++  +G   W + +  MS G A+I +  TL  FR+++L 
Sbjct: 606 GQERKARSFWKVVYQIHMYPNSIVLQGDLTWCLKVRSMSIGAALIGVLCTLEKFRERILK 665

Query: 784 SGVGPSRIDIVTGWGRRSRVTGTSL-VRQAVQELLHMFSFPFFTENGNSGCFVGCGEPLN 842
               P RI I+TG    S+    ++ VRQA++ ++     PF  ++ + G F   G    
Sbjct: 666 RRFVPQRIKILTG----SKADSDAIAVRQAIEAMMKPLDSPFIFQDEDLGSFWCRGSFFV 721

Query: 843 KWLLQSYV 850
           KW  QS+V
Sbjct: 722 KWFRQSHV 729


>gi|302801820|ref|XP_002982666.1| hypothetical protein SELMODRAFT_421954 [Selaginella moellendorffii]
 gi|300149765|gb|EFJ16419.1| hypothetical protein SELMODRAFT_421954 [Selaginella moellendorffii]
          Length = 796

 Score =  220 bits (561), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 162/668 (24%), Positives = 285/668 (42%), Gaps = 116/668 (17%)

Query: 293 STGNVVESVSRILRQWKWGPLAEEALGNTNYSMDAYQANQVLKQLQDHTVALGFFNWLRR 352
           S  +++  +  ++R+  W P  E  L   +     +  N+VLK +Q+  VA GFF W+RR
Sbjct: 68  SNADLISKILYVVRRPYWSPEVERELQLLDIRPSEFHINEVLKNIQEPDVANGFFQWIRR 127

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQ-------------------- 392
           Q  +    ++++ ++   GR + F A+ ++L  +  D C                     
Sbjct: 128 QKWYVPSTYSFSILLNTYGRGKDFQAVQRVLADLKADKCPMTTVAYNTLIKVYGKAHKLD 187

Query: 393 ---------------PNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGC----------- 426
                          P++ T+N L+  Y  A    + L+V+ +MQ +GC           
Sbjct: 188 EAWGYYKEMQDSRCVPDIFTFNTLMSLYSYAGQSEKVLEVYDEMQKIGCSLDRVGYEVVV 247

Query: 427 ------------------------EPDRVTY----------------------------- 433
                                   +P+ V Y                             
Sbjct: 248 PHAGKVGRLDLACMLFERMKAEGHQPNAVAYSALIAGQLKSGRLEIGTKYFEEMRSLEIR 307

Query: 434 ------CTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQL 487
                  +LI+ + K+G L+  +  +K M+A    P+   Y+ +++   KAG L AA + 
Sbjct: 308 PLLGTFASLIEAYCKSGRLETGLKFFKDMEAFNYKPNLCIYAALVDAHAKAGMLDAALEF 367

Query: 488 FCEMVNQGC-IPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLG 546
           +  M   G  +P L+ + ++I   A+A   ++A++LYR+M+  G  P   T  IV+  + 
Sbjct: 368 YERMRGVGLWLPPLI-FAVLIEQHAQAGKAETAVRLYREMRGVGLRPSHFTCRIVVGAVA 426

Query: 547 HCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVP 606
             G  D+ E +  EM+       + V   +V L      +  AWE +  +   G  P+V 
Sbjct: 427 KGGKYDDVERILFEMQEMGLNVADAVNDSIVKLVDDK-RISDAWELFLKVTGHGFTPHVS 485

Query: 607 TCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGFCHELM 666
            C  +L  FL  G +  A  +L  M   G    L+TY +LL                  M
Sbjct: 486 LCREILHGFLSCGDMEHARQMLSFMQRPGSAVDLRTYCMLLEFFLRGSRLEHEEVIISFM 545

Query: 667 AVSGHPAHMFLLSM--PSPGPDGQNVRDHVGSFLEMMHSE-DRESKRGLVDAVVDFLHKS 723
             + HPAH FL  +   S    GQ++ D++ SF   + +E D +++R L + ++++L   
Sbjct: 546 RETKHPAHSFLCGLMGSSKHRKGQSLADYIKSFYSELEAEVDFKTRRYLTNVLLNYLVVM 605

Query: 724 GLKEEAGSVWEVAAQKNVYPDAVKEKGMSYWLINLHVMSDGTAVIALSRTLAWFRKQMLI 783
           G + +A S W+V  Q ++YP+++  +G   W + +  MS G A+I +  TL  FR+++L 
Sbjct: 606 GQERKARSFWKVVYQIHMYPNSIVLQGDLTWCLKVRSMSIGAALIGVLCTLEKFRERILK 665

Query: 784 SGVGPSRIDIVTGWGRRSRVTGTSL-VRQAVQELLHMFSFPFFTENGNSGCFVGCGEPLN 842
               P RI I+TG    S+    ++ VRQA++ ++     PF  ++ + G F   G    
Sbjct: 666 RRFVPQRIKILTG----SKADSDAIAVRQAIEAMMKPLDSPFIFQDEDLGSFWCRGSFFV 721

Query: 843 KWLLQSYV 850
           KW  QS+V
Sbjct: 722 KWFRQSHV 729


>gi|302759176|ref|XP_002963011.1| hypothetical protein SELMODRAFT_438275 [Selaginella moellendorffii]
 gi|300169872|gb|EFJ36474.1| hypothetical protein SELMODRAFT_438275 [Selaginella moellendorffii]
          Length = 2074

 Score =  219 bits (559), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 155/541 (28%), Positives = 250/541 (46%), Gaps = 23/541 (4%)

Query: 328  YQANQVLKQLQ-DHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQM 386
            +Q   VLK+++ D +++L  F W +   GFKHD   Y+TM+ ILG    +     L  ++
Sbjct: 1531 HQVCVVLKKIKHDASLSLKLFTWAKTIPGFKHDLVNYSTMIMILGDDGNYLMAEALFVEI 1590

Query: 387  VRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFL 446
               G + +    N +I  Y R N + EALD++++M   GC PD  T+  LID   K G  
Sbjct: 1591 QELGLRLDTFAVNNMIRCYTRVNRIQEALDLYRKMPYFGCHPDNCTFGLLIDWCGKFGSR 1650

Query: 447  DVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIM 506
                 ++  ++A+  + D  T++ +I+   K      A +   +M   G   +  TY I+
Sbjct: 1651 KELQRIFLDLRASPRNADAQTFNTMIHNFCKQRDFANAREAANQMKAWGIPFSSATYAIL 1710

Query: 507  IALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNW 566
            I + AKAR+ ++A +LY D   +G EP+ + Y+ V+   G  G+   A+ +  ++R+   
Sbjct: 1711 IHMYAKARDSKAAAELYADYLRSGLEPNLIVYNNVILSYGSSGFPGHAQNILGDIRKAGL 1770

Query: 567  VPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYH 626
             PD   Y  L+  W +AG + +A  W+    +    P++  CN+L+  +L+  ++  A  
Sbjct: 1771 APDRFTYCTLISSWARAGAMLQARRWFNKACKTKAGPSIEMCNALIDGYLKAREVEPAKF 1830

Query: 627  LL-QGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGFCHELMAVSGHPAHMFLLSMPS--- 682
            +L + M   G++P+LQTYT+LL   T +    D     E+M  S  PA            
Sbjct: 1831 ILTKVMPERGVEPTLQTYTILLGHYTSSVKVADSRAVREMMKSSSKPAAAAGGGGGGDDH 1890

Query: 683  PGPD--------GQNVRDHVGSFLEMMHSEDRESK-----RGLVDAVVDFLHKSGLKEEA 729
            PG D        G      + S+      + R  K     R L DA+V+ LH  G   EA
Sbjct: 1891 PGVDEFLNEILQGLRAIKELKSYSREFFRKLRTDKPPRWGRWLADALVNHLHCFGYAREA 1950

Query: 730  GSVWEVAAQKNVYPDAVKEKGMSYWLINLHVMSDGTAVIALSRTLAWFRKQMLISGVGPS 789
              VWE  +   +YP  + E     W I L  MS GTA++AL+  L   R+++      P 
Sbjct: 1951 FYVWEGVSSTELYPRGIWEDWQGAWFIWLQDMSSGTAMVALTSGLIVSRRKLARGFERPE 2010

Query: 790  RIDIVTGWGRRSRVTGTSLVRQAVQELLHMFSFPFFTENGNSGCFVGCGEPLNKWLLQSY 849
            R+ IV G+        T  V + +  L   F  PF +     G F+  G     WL +  
Sbjct: 2011 RVIIVCGYASDKSKEVTHAVNRTLVALDSPFE-PFIS----MGRFMCEGNLFRDWLWEKQ 2065

Query: 850  V 850
            V
Sbjct: 2066 V 2066


>gi|302797108|ref|XP_002980315.1| hypothetical protein SELMODRAFT_444519 [Selaginella moellendorffii]
 gi|300151931|gb|EFJ18575.1| hypothetical protein SELMODRAFT_444519 [Selaginella moellendorffii]
          Length = 2030

 Score =  218 bits (555), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 155/541 (28%), Positives = 250/541 (46%), Gaps = 23/541 (4%)

Query: 328  YQANQVLKQLQ-DHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQM 386
            +Q   VLK+++ D +++L  F W +   GFKHD   Y+TM+ ILG    +     L  ++
Sbjct: 1487 HQVCVVLKKIKHDASLSLKLFTWAKTIPGFKHDLVNYSTMIMILGDDGNYLMAEALFVEI 1546

Query: 387  VRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFL 446
               G + +    N +I  Y R N + EALD++++M   GC PD  T+  LID   K G  
Sbjct: 1547 QELGLRLDTFAVNNMIRCYTRVNRIQEALDLYRKMPYFGCHPDNCTFGLLIDWCGKFGSR 1606

Query: 447  DVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIM 506
                 ++  ++A+  + D  T++ +I+   K      A +   +M   G   +  TY I+
Sbjct: 1607 KELQRIFLDLRASPRNADAQTFNTMIHNFCKQRDFANAREAANQMKAWGIPFSSATYAIL 1666

Query: 507  IALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNW 566
            I + AKAR+ ++A +LY D   +G EP+ + Y+ V+   G  G+   A+ +  ++R+   
Sbjct: 1667 IHMYAKARDSKAAAELYADYLRSGLEPNLIVYNNVILSYGSSGFPGHAQNILGDIRKAGL 1726

Query: 567  VPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYH 626
             PD   Y  L+  W +AG + +A  W+    +    P++  CN+L+  +L+  ++  A  
Sbjct: 1727 APDRFTYCTLISSWARAGAMLQARRWFNKACKTKAGPSIEMCNALIDGYLKAREVEPAKF 1786

Query: 627  LL-QGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGFCHELMAVSGHPAHMFLLSMPS--- 682
            +L + M   G++P+LQTYT+LL   T +    D     E+M  S  PA            
Sbjct: 1787 ILTKVMPERGVEPTLQTYTILLGHYTSSVKVADSRAVREMMKSSSKPAAAAAGRGGGDDH 1846

Query: 683  PGPD--------GQNVRDHVGSFLEMMHSEDRESK-----RGLVDAVVDFLHKSGLKEEA 729
            PG D        G      + S+      + R  K     R L DA+V+ LH  G   EA
Sbjct: 1847 PGVDEFLNEILQGLRAIKELKSYSREFFRKLRMDKPPRWGRWLADALVNHLHCFGYAREA 1906

Query: 730  GSVWEVAAQKNVYPDAVKEKGMSYWLINLHVMSDGTAVIALSRTLAWFRKQMLISGVGPS 789
              VWE  +   +YP  + E     W I L  MS GTA++AL+  L   R+++      P 
Sbjct: 1907 FYVWEGVSSTELYPRGIWEDWQGAWFIWLQDMSSGTAMVALTSGLIVSRRKLARGFERPE 1966

Query: 790  RIDIVTGWGRRSRVTGTSLVRQAVQELLHMFSFPFFTENGNSGCFVGCGEPLNKWLLQSY 849
            R+ IV G+        T  V + +  L   F  PF +     G F+  G     WL +  
Sbjct: 1967 RVIIVCGYASDKSKEVTHAVNRTLVALDSPFE-PFIS----MGRFMCEGNLFRDWLWEKQ 2021

Query: 850  V 850
            V
Sbjct: 2022 V 2022


>gi|225446845|ref|XP_002279656.1| PREDICTED: pentatricopeptide repeat-containing protein At1g79490,
           mitochondrial-like [Vitis vinifera]
          Length = 844

 Score =  213 bits (541), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 156/610 (25%), Positives = 265/610 (43%), Gaps = 111/610 (18%)

Query: 298 VESVSRILRQWKWGPLAEEALGNTNYSMDAYQANQVLKQLQDHTVALGFFNWLRRQAGFK 357
           V  +  I+ +W+WGP  E  L   ++  +     Q LK + D   +L  F W +RQ  + 
Sbjct: 147 VAKIVEIVNRWRWGPELETQLDKLHFVPNMSHVIQALKIVTDTDASLSLFRWAKRQPWYS 206

Query: 358 H-DEHTYTTMVGILGRARQFGAINKLLDQMVRD--------------------------- 389
             ++  Y  +   L ++R F AI  L D+M+RD                           
Sbjct: 207 MLNDECYALLFDRLNQSRDFDAIQSLFDEMIRDSGDNNGVSSVIACNQVVRDLAKAEKLE 266

Query: 390 ------------GCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLI 437
                       GC+ +  TYN LI  +       +A +V++ M+  GC  D  TY  +I
Sbjct: 267 VAFCCFKKVQDSGCKIDTATYNSLITLFLNKGLPYKAFEVYESMEAAGCLLDGSTYELMI 326

Query: 438 DIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCI 497
              AK+G LD A  ++++M+   L P    ++ +++ +GKAG L  + +++ EM   G  
Sbjct: 327 PSLAKSGRLDAAFKLFQEMKEKNLRPSFLVFASLVDSMGKAGRLDTSMKVYMEMQGFGLR 386

Query: 498 PNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAV 557
           P+   Y  +I    KA   ++AL+++ +M+ AGF P+   Y++V+E     G L+ A +V
Sbjct: 387 PSATMYVSLIESFVKAGKLETALRIWDEMKKAGFRPNYGLYTMVVESHAKSGKLETAMSV 446

Query: 558 FAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLS---- 613
           F++M +  ++P    Y  L+++   +G V  A + Y +M  AGLRP + T  +LL+    
Sbjct: 447 FSDMEKAGFLPTPSTYSCLLEMHSASGQVDSAMKLYNSMTNAGLRPGLSTYTALLTLLAN 506

Query: 614 ------------------------------AFLRVGQLSDAYHLLQGMLNLGL------- 636
                                          +++ G +  A   L+ M + G+       
Sbjct: 507 KKLVDVAAKVLLEMKAMGFSVDVSASDVLMVYIKDGSVDLALRWLRFMGSSGIRTNNFII 566

Query: 637 ----------------KPSLQTYT-------LLLSCCTEA---RSPYDMGFCHELMAVSG 670
                           KP L+TY        L+L     A   R   +    H ++ +S 
Sbjct: 567 RQLFESCMKNGLYESAKPLLETYVNSAAKVDLILYTSILAHLVRCQEEQNERHLMLILSA 626

Query: 671 --HPAHMFLLSM-PSPGPDGQNVRDHVGSFLEMMHSEDRE-SKRGLVDAVVDFLHKSGLK 726
             H AH F+  +   P    Q V   V  F + +  E  E + R  V+ ++++L   G  
Sbjct: 627 TKHKAHTFMCGLFTGPEQRKQPVLSFVREFFQSVDYELEEGAARYFVNVLLNYLVLMGQI 686

Query: 727 EEAGSVWEVAAQKNVYPDAVKEKGMSYWLINLHVMSDGTAVIALSRTLAWFRKQMLISGV 786
             A  VW+VA +  ++P A+       W +++  +S G A++A+  TL  FRK+ML  GV
Sbjct: 687 NRARCVWKVAYENKLFPKAIVFDQHIAWSLDVRNLSVGAALVAVVHTLHRFRKRMLYYGV 746

Query: 787 GPSRIDIVTG 796
            P RI +VTG
Sbjct: 747 VPRRIKLVTG 756


>gi|302797110|ref|XP_002980316.1| hypothetical protein SELMODRAFT_420032 [Selaginella moellendorffii]
 gi|300151932|gb|EFJ18576.1| hypothetical protein SELMODRAFT_420032 [Selaginella moellendorffii]
          Length = 1527

 Score =  212 bits (540), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 154/551 (27%), Positives = 251/551 (45%), Gaps = 33/551 (5%)

Query: 325  MDAYQANQVLKQLQ-DHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLL 383
            M  +Q   VLK+++ D +++L  F W +   GFKHD   Y+TM+ ILG    +     L 
Sbjct: 977  MHPHQVCVVLKKIKHDASLSLKLFTWAKTIPGFKHDLVNYSTMIMILGDDGNYLMAEALF 1036

Query: 384  DQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKA 443
             ++   G + +    N +I  Y R N + EALD++ +M   GC PD  T+  LID   K 
Sbjct: 1037 VEIQELGLRLDTFAVNNMIRCYTRVNRIQEALDLYSKMPYFGCHPDNCTFGLLIDWCGKF 1096

Query: 444  GFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTY 503
            G       ++  ++A+  + D  T++ +I+   K      A +   +M   G   +  TY
Sbjct: 1097 GSRKELQRIFLDLRASPRNADAQTFNTMIHNFCKQRDFANAREAANQMKAWGIPFSSATY 1156

Query: 504  NIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRR 563
             I+I + AKAR+ ++A +LY D   +G EP+ + Y+ V+   G  G+   A+ +  ++R+
Sbjct: 1157 AILIHMYAKARDSKAAAELYADYLRSGLEPNLIVYNNVILSYGSSGFPGHAQNILGDIRK 1216

Query: 564  KNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSD 623
                PD   Y  L+  W +AG + +A  W+    +    P++  CN+L+  +L+  ++  
Sbjct: 1217 AGLAPDRFTYCTLISSWARAGAMLQARRWFNKACKTKAGPSIEMCNALIDGYLKAREVEP 1276

Query: 624  AYHLL-QGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGFCHELMAVSGHPAHMFLLSMPS 682
            A  +L + M   G++P+LQTYT+LL   T +    D     E+M  S  P  +   +  +
Sbjct: 1277 AKFILTKVMPERGVEPTLQTYTILLGHYTSSVKVADSRAVREMMKSSSKPPPLPAAAAAA 1336

Query: 683  ----------PGPD--------GQNVRDHVGSFLEMMHSEDRESK-----RGLVDAVVDF 719
                      PG D        G      + S+      + R  K     R L DA+V+ 
Sbjct: 1337 AGGGGGGDDHPGVDEFLNEILQGLRAIKELKSYSREFFRKLRMDKPPRWGRWLADALVNH 1396

Query: 720  LHKSGLKEEAGSVWEVAAQKNVYPDAVKEKGMSYWLINLHVMSDGTAVIALSRTLAWFRK 779
            LH  G   EA  VWE  +   +YP  + E     W I L  MS GTA++AL+      R+
Sbjct: 1397 LHCFGYAREAFYVWEGVSSTELYPRGIWEDWQGAWFIWLQDMSSGTAMVALTSV---SRR 1453

Query: 780  QMLISGVGPSRIDIVTGWGRRSRVTGTSLVRQAVQELLHMFSFPFFTENGNSGCFVGCGE 839
            ++      P R+ IV G+        T  V + +  L   F  PF +     G F+  G 
Sbjct: 1454 KLARGFERPERVIIVCGYASDKSKEVTHAVNRTLVALDSPFE-PFIS----MGRFMCEGN 1508

Query: 840  PLNKWLLQSYV 850
                WL +  V
Sbjct: 1509 LFRDWLWEKQV 1519


>gi|168049795|ref|XP_001777347.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162671323|gb|EDQ57877.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 621

 Score =  211 bits (537), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 113/293 (38%), Positives = 173/293 (59%), Gaps = 1/293 (0%)

Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLI 402
           A   F  ++R+ G K D  T+T ++  LG+A +     +LLD+M   G +P VVTYN LI
Sbjct: 203 AFKLFQEMKRR-GRKPDSITFTALMDALGKAGRVDDALELLDEMKERGVKPGVVTYNALI 261

Query: 403 HSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLS 462
             +G+   L EA ++  +M+  GC+PD VTY  LI    KA  LD A  + KKM+  G  
Sbjct: 262 AGFGKVGDLVEAYNLLDEMKRNGCKPDVVTYSCLITGLIKASQLDEACQVLKKMEKEGCP 321

Query: 463 PDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKL 522
           PDT TY+ +IN LGKAG L  A +LF  M ++GC P++VTY+ +I    KA   +SA  L
Sbjct: 322 PDTITYNTLINGLGKAGLLNDAGRLFDRMKSKGCNPDVVTYSTLITALGKAARVESACVL 381

Query: 523 YRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGK 582
           + +M++ G +PD  TY  ++ VLG  G +D+A+ +F+EMR K   PD   Y   ++  G+
Sbjct: 382 FEEMESVGIQPDLFTYCSIITVLGKAGQVDDADRLFSEMRGKGLSPDVITYNAFLNSLGR 441

Query: 583 AGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLG 635
            G  ++A + +E M ++GL P+V T ++LL    +  ++ DA  LL+ ++  G
Sbjct: 442 GGRFKEARKIFEDMKESGLLPDVATYDALLLGLSKTKEVDDACGLLKELIEQG 494



 Score =  204 bits (519), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 126/383 (32%), Positives = 194/383 (50%)

Query: 362 TYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQM 421
           TY +++  L +A Q      L +++      P+VV+Y+ LI+S GRA     AL+V  +M
Sbjct: 11  TYNSLLNALAKAGQCEEAQLLFEELKAAKWTPDVVSYSCLINSLGRAGKWEAALEVVAEM 70

Query: 422 QVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHL 481
           Q  GC+P+  TY TL+D   KAG  D A+ +  +M+  G  PD  TY+ +I+ LGKAG L
Sbjct: 71  QAKGCKPNLWTYNTLVDCLGKAGQFDEALRLLAEMRDNGCVPDVRTYNCLISTLGKAGRL 130

Query: 482 QAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIV 541
             A  LF EM  +GC+P+  TYN +I    K    Q A++L  +M+  G  PD +TYS +
Sbjct: 131 SEAFTLFAEMRERGCVPDTFTYNSLIYGLGKVGRSQKAMELLEEMERHGCPPDVMTYSSL 190

Query: 542 MEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGL 601
           +  LG  G   +A  +F EM+R+   PD   +  L+D  GKAG V  A E  + M + G+
Sbjct: 191 ITGLGKDGETVKAFKLFQEMKRRGRKPDSITFTALMDALGKAGRVDDALELLDEMKERGV 250

Query: 602 RPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGF 661
           +P V T N+L++ F +VG L +AY+LL  M   G KP + TY+ L++   +A    +   
Sbjct: 251 KPGVVTYNALIAGFGKVGDLVEAYNLLDEMKRNGCKPDVVTYSCLITGLIKASQLDEACQ 310

Query: 662 CHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRESKRGLVDAVVDFLH 721
             + M   G P      +    G     + +  G   + M S+           ++  L 
Sbjct: 311 VLKKMEKEGCPPDTITYNTLINGLGKAGLLNDAGRLFDRMKSKGCNPDVVTYSTLITALG 370

Query: 722 KSGLKEEAGSVWEVAAQKNVYPD 744
           K+   E A  ++E      + PD
Sbjct: 371 KAARVESACVLFEEMESVGIQPD 393



 Score =  191 bits (486), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 116/395 (29%), Positives = 198/395 (50%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           + A +  D  +Y+ ++  LGRA ++ A  +++ +M   GC+PN+ TYN L+   G+A   
Sbjct: 36  KAAKWTPDVVSYSCLINSLGRAGKWEAALEVVAEMQAKGCKPNLWTYNTLVDCLGKAGQF 95

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
           +EAL +  +M+  GC PD  TY  LI    KAG L  A  ++ +M+  G  PDTFTY+ +
Sbjct: 96  DEALRLLAEMRDNGCVPDVRTYNCLISTLGKAGRLSEAFTLFAEMRERGCVPDTFTYNSL 155

Query: 472 INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF 531
           I  LGK G  Q A +L  EM   GC P+++TY+ +I    K      A KL+++M+  G 
Sbjct: 156 IYGLGKVGRSQKAMELLEEMERHGCPPDVMTYSSLITGLGKDGETVKAFKLFQEMKRRGR 215

Query: 532 EPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWE 591
           +PD +T++ +M+ LG  G +D+A  +  EM+ +   P    Y  L+  +GK G++ +A+ 
Sbjct: 216 KPDSITFTALMDALGKAGRVDDALELLDEMKERGVKPGVVTYNALIAGFGKVGDLVEAYN 275

Query: 592 WYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCT 651
             + M + G +P+V T + L++  ++  QL +A  +L+ M   G  P   TY  L++   
Sbjct: 276 LLDEMKRNGCKPDVVTYSCLITGLIKASQLDEACQVLKKMEKEGCPPDTITYNTLINGLG 335

Query: 652 EARSPYDMGFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRESKRG 711
           +A    D G   + M   G    +   S            +      E M S   +    
Sbjct: 336 KAGLLNDAGRLFDRMKSKGCNPDVVTYSTLITALGKAARVESACVLFEEMESVGIQPDLF 395

Query: 712 LVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAV 746
              +++  L K+G  ++A  ++     K + PD +
Sbjct: 396 TYCSIITVLGKAGQVDDADRLFSEMRGKGLSPDVI 430



 Score =  187 bits (476), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 122/401 (30%), Positives = 197/401 (49%), Gaps = 14/401 (3%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           R+ G   D  TY +++  LG+  +     +LL++M R GC P+V+TY+ LI   G+    
Sbjct: 141 RERGCVPDTFTYNSLIYGLGKVGRSQKAMELLEEMERHGCPPDVMTYSSLITGLGKDGET 200

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
            +A  +F++M+  G +PD +T+  L+D   KAG +D A+++  +M+  G+ P   TY+ +
Sbjct: 201 VKAFKLFQEMKRRGRKPDSITFTALMDALGKAGRVDDALELLDEMKERGVKPGVVTYNAL 260

Query: 472 INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF 531
           I   GK G L  A+ L  EM   GC P++VTY+ +I    KA     A ++ + M+  G 
Sbjct: 261 IAGFGKVGDLVEAYNLLDEMKRNGCKPDVVTYSCLITGLIKASQLDEACQVLKKMEKEGC 320

Query: 532 EPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWE 591
            PD +TY+ ++  LG  G L++A  +F  M+ K   PD   Y  L+   GKA  V  A  
Sbjct: 321 PPDTITYNTLINGLGKAGLLNDAGRLFDRMKSKGCNPDVVTYSTLITALGKAARVESACV 380

Query: 592 WYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCC- 650
            +E M   G++P++ T  S+++   + GQ+ DA  L   M   GL P + TY   L+   
Sbjct: 381 LFEEMESVGIQPDLFTYCSIITVLGKAGQVDDADRLFSEMRGKGLSPDVITYNAFLNSLG 440

Query: 651 -----TEARSPY-DMGFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSE 704
                 EAR  + DM     L  V+ + A +  LS        + V D  G   E++   
Sbjct: 441 RGGRFKEARKIFEDMKESGLLPDVATYDALLLGLSKT------KEVDDACGLLKELIEQG 494

Query: 705 DRESKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDA 745
                    D  ++ L   G  +EA  + + A  K ++P A
Sbjct: 495 CAFDSLKF-DECLEILTSWGNVDEAHELLQFANSKGLWPGA 534



 Score =  187 bits (475), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 109/347 (31%), Positives = 178/347 (51%), Gaps = 36/347 (10%)

Query: 336 QLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNV 395
           ++ D   A    + ++R  G K D  TY+ ++  L +A Q     ++L +M ++GC P+ 
Sbjct: 266 KVGDLVEAYNLLDEMKRN-GCKPDVVTYSCLITGLIKASQLDEACQVLKKMEKEGCPPDT 324

Query: 396 VTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKK 455
           +TYN LI+  G+A  LN+A  +F +M+  GC PD VTY TLI    KA  ++ A  ++++
Sbjct: 325 ITYNTLINGLGKAGLLNDAGRLFDRMKSKGCNPDVVTYSTLITALGKAARVESACVLFEE 384

Query: 456 MQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARN 515
           M++ G+ PD FTY  II  LGKAG +  A +LF EM  +G  P+++TYN  +    +   
Sbjct: 385 MESVGIQPDLFTYCSIITVLGKAGQVDDADRLFSEMRGKGLSPDVITYNAFLNSLGRGGR 444

Query: 516 YQSALKLYRDMQNAGFEPDKVTYSIV---------------------------------- 541
           ++ A K++ DM+ +G  PD  TY  +                                  
Sbjct: 445 FKEARKIFEDMKESGLLPDVATYDALLLGLSKTKEVDDACGLLKELIEQGCAFDSLKFDE 504

Query: 542 -MEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAG 600
            +E+L   G +DEA  +      K   P    Y  L+D   KAG V +A+   E + + G
Sbjct: 505 CLEILTSWGNVDEAHELLQFANSKGLWPGASSYNALIDALAKAGRVSEAFNTLEDLKEQG 564

Query: 601 LRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
            +P++ + +SL+SA  + GQ+  A+ LL+ M   GLK S ++Y+ L+
Sbjct: 565 GKPDIVSYSSLISALGQTGQIDTAFELLEEMSKRGLKLSPRSYSNLV 611



 Score =  183 bits (465), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 108/332 (32%), Positives = 170/332 (51%), Gaps = 35/332 (10%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           ++ G K    TY  ++   G+         LLD+M R+GC+P+VVTY+ LI    +A+ L
Sbjct: 246 KERGVKPGVVTYNALIAGFGKVGDLVEAYNLLDEMKRNGCKPDVVTYSCLITGLIKASQL 305

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
           +EA  V K+M+  GC PD +TY TLI+   KAG L+ A  ++ +M++ G +PD  TYS +
Sbjct: 306 DEACQVLKKMEKEGCPPDTITYNTLINGLGKAGLLNDAGRLFDRMKSKGCNPDVVTYSTL 365

Query: 472 INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF 531
           I  LGKA  +++A  LF EM + G  P+L TY  +I +  KA     A +L+ +M+  G 
Sbjct: 366 ITALGKAARVESACVLFEEMESVGIQPDLFTYCSIITVLGKAGQVDDADRLFSEMRGKGL 425

Query: 532 EPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVY-----------------G 574
            PD +TY+  +  LG  G   EA  +F +M+    +PD   Y                 G
Sbjct: 426 SPDVITYNAFLNSLGRGGRFKEARKIFEDMKESGLLPDVATYDALLLGLSKTKEVDDACG 485

Query: 575 LLVDLWGKA------------------GNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFL 616
           LL +L  +                   GNV +A E  +     GL P   + N+L+ A  
Sbjct: 486 LLKELIEQGCAFDSLKFDECLEILTSWGNVDEAHELLQFANSKGLWPGASSYNALIDALA 545

Query: 617 RVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
           + G++S+A++ L+ +   G KP + +Y+ L+S
Sbjct: 546 KAGRVSEAFNTLEDLKEQGGKPDIVSYSSLIS 577



 Score =  118 bits (295), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 96/345 (27%), Positives = 160/345 (46%), Gaps = 21/345 (6%)

Query: 462 SPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALK 521
           SP+  TY+ ++N L KAG  + A  LF E+      P++V+Y+ +I    +A  +++AL+
Sbjct: 6   SPNVVTYNSLLNALAKAGQCEEAQLLFEELKAAKWTPDVVSYSCLINSLGRAGKWEAALE 65

Query: 522 LYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWG 581
           +  +MQ  G +P+  TY+ +++ LG  G  DEA  + AEMR    VPD   Y  L+   G
Sbjct: 66  VVAEMQAKGCKPNLWTYNTLVDCLGKAGQFDEALRLLAEMRDNGCVPDVRTYNCLISTLG 125

Query: 582 KAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQ 641
           KAG + +A+  +  M + G  P+  T NSL+    +VG+   A  LL+ M   G  P + 
Sbjct: 126 KAGRLSEAFTLFAEMRERGCVPDTFTYNSLIYGLGKVGRSQKAMELLEEMERHGCPPDVM 185

Query: 642 TY-TLLLSCCTEARSPYDMGFCHELMAVSGHPAHM-FLLSMPSPGPDGQNVRDHVGSFLE 699
           TY +L+     +  +        E+      P  + F   M + G  G+ V D +    E
Sbjct: 186 TYSSLITGLGKDGETVKAFKLFQEMKRRGRKPDSITFTALMDALGKAGR-VDDALELLDE 244

Query: 700 MMHSEDRESKRGLV--DAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAVKEKGMSYWLIN 757
           M   ++R  K G+V  +A++    K G   EA ++ +   +    PD V    +   LI 
Sbjct: 245 M---KERGVKPGVVTYNALIAGFGKVGDLVEAYNLLDEMKRNGCKPDVVTYSCLITGLIK 301

Query: 758 LHVMSDGTAVIALSRTLAWFRKQMLISGVGPSRI---DIVTGWGR 799
              + +   V+          K+M   G  P  I    ++ G G+
Sbjct: 302 ASQLDEACQVL----------KKMEKEGCPPDTITYNTLINGLGK 336


>gi|449442096|ref|XP_004138818.1| PREDICTED: pentatricopeptide repeat-containing protein At1g79490,
           mitochondrial-like [Cucumis sativus]
 gi|449490234|ref|XP_004158545.1| PREDICTED: pentatricopeptide repeat-containing protein At1g79490,
           mitochondrial-like [Cucumis sativus]
          Length = 823

 Score =  211 bits (537), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 160/611 (26%), Positives = 261/611 (42%), Gaps = 109/611 (17%)

Query: 295 GNVVESVSRILRQWKWGPLAEEALGNTNYSMDAYQANQVLKQLQDHTVALGFFNWLRRQA 354
            + V  +  ++R+WKWGP  E  L    +  +     QVLK + D   +L  F W +RQ+
Sbjct: 127 ASAVAKIVEVVRRWKWGPELESQLEKLQFVPNMTHITQVLKIIDDAEASLSLFRWAKRQS 186

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVT---YNRLIHSYGRANYL 411
            +  ++  Y  +   L + R F AI  L D++VRD      V+   YNR+I    +A  L
Sbjct: 187 WYSPNDECYGLLFDGLNQRRDFDAIQLLFDEVVRDLSSDETVSFSAYNRVIQYLAKAEKL 246

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
             +   FK++   G + D  TY +LI +    G    A ++Y+ M  A  S D  T+ ++
Sbjct: 247 EVSFCCFKKIHDSGFKVDTQTYNSLITLFLNKGLPYKAFEIYESMAGAECSLDASTFELM 306

Query: 472 INCLGKAGHLQAAHQLFCEMVNQG-----------------------------------C 496
           I CL K+G L AA +LF EM  +                                     
Sbjct: 307 IPCLAKSGRLDAAMKLFQEMKEKKYRPAQNVYSSLVDSMGKAGRLDTSMKIYMEMQLLEL 366

Query: 497 IPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEA 556
            P+ + +  +I    KA    +ALKL+ DM+ AGF+P+   YS+V+E     G LD A +
Sbjct: 367 RPSALMFVSLIESHVKAGKLDTALKLWDDMKRAGFKPNFGLYSMVVESHAKSGKLDVAMS 426

Query: 557 VFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLS--- 613
           VF EM +  ++P    Y  L+++   +G+V  A + Y +M  AGLR  + T  SLL+   
Sbjct: 427 VFTEMEKAGFLPIPSTYCCLLEMQAASGHVDAAMKLYNSMTNAGLRLGLNTYTSLLTLLA 486

Query: 614 -------------------------------AFLRVGQLSDAYHLLQGMLNLGLK----- 637
                                           +++ G +  A   LQ M + G++     
Sbjct: 487 NKKLIDIAAKVLLEMKAMGFSVSVSASDVLMVYIKEGSVDSALRWLQFMGSSGIRTNSFI 546

Query: 638 ------------------PSLQT------------YTLLLSCCTEARSPYDMGFCHELMA 667
                             P L+T            YT +L+     +      +   +++
Sbjct: 547 IRQLFESCMKKGMYESAMPLLETYVNSAAKVDLILYTSILAHLVRCQEEQKERYLMSILS 606

Query: 668 VSGHPAHMFLLSMPSPGPD-GQNVRDHVGSFLEMMHSEDRESK-RGLVDAVVDFLHKSGL 725
            + H AH FL  + +      Q V   V  F + +  E  ES  +  V+ ++++L   G 
Sbjct: 607 TTKHKAHSFLCGLFTGTEQRKQPVLSFVREFFQSIDYELEESSAKYFVNVLLNYLILMGQ 666

Query: 726 KEEAGSVWEVAAQKNVYPDAVKEKGMSYWLINLHVMSDGTAVIALSRTLAWFRKQMLISG 785
              A  +W+VA +  ++P A+       W +++  +S G A+IA+  TL  FRK+ML  G
Sbjct: 667 INRARCIWKVAYENKLFPKAIVFDQHIAWSLDVRNLSVGAALIAVVHTLHRFRKRMLYYG 726

Query: 786 VGPSRIDIVTG 796
           + P RI +VTG
Sbjct: 727 IVPRRIKLVTG 737


>gi|168049914|ref|XP_001777406.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162671255|gb|EDQ57810.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 570

 Score =  208 bits (529), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 150/556 (26%), Positives = 259/556 (46%), Gaps = 39/556 (7%)

Query: 324 SMDAYQANQVLKQLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLL 383
           S++ Y    +L  L+   VAL  F WL+ +  F  + +TY  M+ +L R +Q+    ++ 
Sbjct: 7   SLNPYDVVAILNTLKSWKVALSLFKWLQAEQNFNLNIYTYNVMLKVLRRGQQWELSQQIA 66

Query: 384 DQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKA 443
           + M+  G +P+ +TY+ LI    R NY + A+  F +M    C PD VTY T+ID++ K 
Sbjct: 67  EDMINAGIRPDNITYSTLISCANRCNYQDAAMAWFDRMHDAQCVPDAVTYSTMIDVYGKV 126

Query: 444 GFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTY 503
           G  D A+ +Y+ ++ +G  PD  TY  ++   G+AG++ AA  +F EM   G  P  V Y
Sbjct: 127 GKYDEAVALYESVKKSGWKPDKVTYGTMVRLFGRAGYISAAVSIFDEMKGSGIQPGSVVY 186

Query: 504 NIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRR 563
           NIMI+   +A     ALK++++M+ AG +P+ VT S VME+    G + E   +F  M R
Sbjct: 187 NIMISCLGRAGRMGHALKVFQEMKQAGVKPNAVTLSTVMEIYSRSGKVMEGLGIFHHM-R 245

Query: 564 KNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSD 623
           ++   D  VY  ++ +  +AG V +A ++   M++ G +PN  T  +++S + + G   +
Sbjct: 246 QDLACDIIVYNAVIKMCREAGLVPEAEQYLREMVEYGHQPNDWTYRNMISLYAKNGMAVE 305

Query: 624 AYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMG-FCHELMAVSGHPAHMF------ 676
           A  +   ++  G +P + +YT LL     A+    +    HE+++ +  P          
Sbjct: 306 AQRMFSQLVEAGYQPDVMSYTSLLQGYGNAKDYEKVQEILHEMVSANCAPDERLWCVILN 365

Query: 677 ----------------LLSMPSPGPDGQNVRDHV----------GSFLEMMHSE-DRESK 709
                            L M +P  D  N+  H+          G  L+ + S+   E+ 
Sbjct: 366 LLDACDTDVEFEILRSCLRMCNPTMD--NIVGHIFEENLVLKKLGDGLQSLLSDMAEEAH 423

Query: 710 RGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAVKEKGMSYWLINLHVMSDGTAVIA 769
           + + ++++  +   G +  A  +  +     VY   ++ K    W ++L  +S G A  A
Sbjct: 424 KPICNSLLQLIWHKGDRNYAFKLLSLFCSSGVYT-GLQTKSSIMWSLHLKSLSTGAAHCA 482

Query: 770 LSRTLAWFRKQMLISGVGPSRIDIVTGWGRRSRVTGTSLVRQAVQELLHMFSFPFFTENG 829
           L   L+  R  +      PSR  I TG G +       LV   +  LL  F+ PF     
Sbjct: 483 LLSWLSSVRYAIQEGQELPSRFMIETGVGNQLNADELRLVV-VISSLLKEFTSPFIECVD 541

Query: 830 NSGCFVGCGEPLNKWL 845
                   G  + +WL
Sbjct: 542 RKDWLEASGVDVRQWL 557


>gi|302757207|ref|XP_002962027.1| hypothetical protein SELMODRAFT_77588 [Selaginella moellendorffii]
 gi|300170686|gb|EFJ37287.1| hypothetical protein SELMODRAFT_77588 [Selaginella moellendorffii]
          Length = 814

 Score =  207 bits (527), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 136/520 (26%), Positives = 235/520 (45%), Gaps = 59/520 (11%)

Query: 273 KPSREMKIPAGLAPFSRHFASTGNVVESVSRI-LRQWKW---------GPLAEEALGNTN 322
           KP RE   P     F R      ++VE++  + L    W         GP+  + LG+  
Sbjct: 34  KPEREHLTP----DFVRRADLVTSIVETIKDVRLDGSSWSVHNIRNVLGPVHGQVLGS-- 87

Query: 323 YSMDAYQANQVLKQLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKL 382
                     VL+ L+    A+ FF W   QAGF+HD  TY  ++ +L   + +     +
Sbjct: 88  ------HVAAVLRSLKVTGTAISFFRWAGEQAGFQHDVFTYNCLMNLLVAEKNYSQCYAI 141

Query: 383 LDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAK 442
            ++M++ G  PN  ++N LI S+ R    ++A+  F+ M+   C+PD  T+  L+D   K
Sbjct: 142 HEEMLKAGIAPNTFSFNILIRSFARTRRADDAVTCFEIMKRKRCKPDLHTFLILVDCLCK 201

Query: 443 AGFLDVAMDMYKKMQA------------------------------------AGLSPDTF 466
           AG  + A +++ +M A                                     G  PD  
Sbjct: 202 AGMDEKAFEVFHEMMAMGFVPPDRALHTAMVRTLLKAKRVKEAREVFGQMEKCGFPPDAI 261

Query: 467 TYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDM 526
            Y+ +I+ L KAGH Q A ++   M+ + C+P  VTY I++    KA   + A +L+R M
Sbjct: 262 AYNTMIDGLAKAGHAQEALKVLDNMLAKACVPTEVTYGILVNSLCKAGTLERAEELFRVM 321

Query: 527 QNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNV 586
             +GF P+ V Y+ ++      G + EA ++F EM    + PD   + +++D   K+GN 
Sbjct: 322 AASGFRPNSVIYTSLIHGFAKSGRMKEACSLFDEMVEAGYRPDVITHTVMIDGLCKSGNF 381

Query: 587 RKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLL 646
            +A + +E M++ G +PNV T  +++    ++G++++A+ +++GM+  G  P   TY  L
Sbjct: 382 EQAAKSFEEMMRGGCKPNVVTYTTIIQGLSKIGRVANAFRIMKGMIAHGCFPDSVTYICL 441

Query: 647 L-SCCTEARSPYDMGFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSED 705
           L   C   R         EL   S  P      S+     DG +V + +    E   +  
Sbjct: 442 LDGFCKLGRLDEAAQLLDELDKCSSSPNLQLYSSLVKGLCDGGSVENTLDDLFEQSKAAA 501

Query: 706 RESKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDA 745
                GL  +++  L K+G  +EA  +++    +   PDA
Sbjct: 502 ENLDPGLCCSIIVGLCKTGRLDEACRIFQRMVSEGCKPDA 541



 Score =  154 bits (390), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 93/297 (31%), Positives = 151/297 (50%), Gaps = 1/297 (0%)

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
           + GF  D   Y TM+  L +A       K+LD M+   C P  VTY  L++S  +A  L 
Sbjct: 253 KCGFPPDAIAYNTMIDGLAKAGHAQEALKVLDNMLAKACVPTEVTYGILVNSLCKAGTLE 312

Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
            A ++F+ M   G  P+ V Y +LI   AK+G +  A  ++ +M  AG  PD  T++V+I
Sbjct: 313 RAEELFRVMAASGFRPNSVIYTSLIHGFAKSGRMKEACSLFDEMVEAGYRPDVITHTVMI 372

Query: 473 NCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFE 532
           + L K+G+ + A + F EM+  GC PN+VTY  +I   +K     +A ++ + M   G  
Sbjct: 373 DGLCKSGNFEQAAKSFEEMMRGGCKPNVVTYTTIIQGLSKIGRVANAFRIMKGMIAHGCF 432

Query: 533 PDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAW-E 591
           PD VTY  +++     G LDEA  +  E+ + +  P+  +Y  LV      G+V     +
Sbjct: 433 PDSVTYICLLDGFCKLGRLDEAAQLLDELDKCSSSPNLQLYSSLVKGLCDGGSVENTLDD 492

Query: 592 WYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
            +E    A    +   C S++    + G+L +A  + Q M++ G KP   TY +L++
Sbjct: 493 LFEQSKAAAENLDPGLCCSIIVGLCKTGRLDEACRIFQRMVSEGCKPDATTYNILIN 549



 Score =  145 bits (366), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 95/333 (28%), Positives = 148/333 (44%), Gaps = 38/333 (11%)

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
           +AG++ D  T+T M+  L ++  F    K  ++M+R GC+PNVVTY  +I    +   + 
Sbjct: 358 EAGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGGCKPNVVTYTTIIQGLSKIGRVA 417

Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSV-- 470
            A  + K M   GC PD VTY  L+D   K G LD A  +  ++     SP+   YS   
Sbjct: 418 NAFRIMKGMIAHGCFPDSVTYICLLDGFCKLGRLDEAAQLLDELDKCSSSPNLQLYSSLV 477

Query: 471 ----------------------------------IINCLGKAGHLQAAHQLFCEMVNQGC 496
                                             II  L K G L  A ++F  MV++GC
Sbjct: 478 KGLCDGGSVENTLDDLFEQSKAAAENLDPGLCCSIIVGLCKTGRLDEACRIFQRMVSEGC 537

Query: 497 IPNLVTYNIMIALQAKARN--YQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEA 554
            P+  TYNI+I    ++R    + A  L  D++  G+ PD VTY+ +   L   G +D A
Sbjct: 538 KPDATTYNILINGLCRSRENRVERAFALLHDLEMVGYLPDAVTYTPLCIGLCKIGEVDRA 597

Query: 555 EAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSA 614
             +  E   + W  D   Y  L       G V +A   ++ M++ G  P+      +++ 
Sbjct: 598 VKMLEEASSRGWNADVVAYTALCTGLCYQGQVDRAVSLFQEMVRQGGAPDAAAYCCIING 657

Query: 615 FLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
            ++  +L DA      M+  G KP++ TYT L+
Sbjct: 658 LIKGKKLEDACKFFDEMIGKGQKPTVATYTALV 690



 Score =  129 bits (323), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 85/270 (31%), Positives = 129/270 (47%), Gaps = 3/270 (1%)

Query: 381 KLLDQMVRDGCQPNVVTYNRLIHSYGRA--NYLNEALDVFKQMQVVGCEPDRVTYCTLID 438
           ++  +MV +GC+P+  TYN LI+   R+  N +  A  +   +++VG  PD VTY  L  
Sbjct: 527 RIFQRMVSEGCKPDATTYNILINGLCRSRENRVERAFALLHDLEMVGYLPDAVTYTPLCI 586

Query: 439 IHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIP 498
              K G +D A+ M ++  + G + D   Y+ +   L   G +  A  LF EMV QG  P
Sbjct: 587 GLCKIGEVDRAVKMLEEASSRGWNADVVAYTALCTGLCYQGQVDRAVSLFQEMVRQGGAP 646

Query: 499 NLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVF 558
           +   Y  +I    K +  + A K + +M   G +P   TY+ +++ L H G +DEA   F
Sbjct: 647 DAAAYCCIINGLIKGKKLEDACKFFDEMIGKGQKPTVATYTALVQALCHAGNVDEAFHRF 706

Query: 559 AEM-RRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLR 617
             M  R   V    +Y  L+  + KA  V  A + +E M+  G  P   T  SL    +R
Sbjct: 707 EGMLARGELVGSVMIYDALIHGFCKALKVDAALKLFEDMISRGNVPTAVTSASLFDGLVR 766

Query: 618 VGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
            G+   A  LLQ M   G  P   T+T +L
Sbjct: 767 SGKTEKAQELLQEMAAGGSPPHAATFTAIL 796



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 58/225 (25%), Positives = 103/225 (45%), Gaps = 1/225 (0%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           G+  D  TYT +   L +  +     K+L++    G   +VV Y  L         ++ A
Sbjct: 573 GYLPDAVTYTPLCIGLCKIGEVDRAVKMLEEASSRGWNADVVAYTALCTGLCYQGQVDRA 632

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
           + +F++M   G  PD   YC +I+   K   L+ A   + +M   G  P   TY+ ++  
Sbjct: 633 VSLFQEMVRQGGAPDAAAYCCIINGLIKGKKLEDACKFFDEMIGKGQKPTVATYTALVQA 692

Query: 475 LGKAGHLQAAHQLFCEMVNQG-CIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEP 533
           L  AG++  A   F  M+ +G  + +++ Y+ +I    KA    +ALKL+ DM + G  P
Sbjct: 693 LCHAGNVDEAFHRFEGMLARGELVGSVMIYDALIHGFCKALKVDAALKLFEDMISRGNVP 752

Query: 534 DKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVD 578
             VT + + + L   G  ++A+ +  EM      P    +  ++D
Sbjct: 753 TAVTSASLFDGLVRSGKTEKAQELLQEMAAGGSPPHAATFTAILD 797



 Score = 53.9 bits (128), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 58/243 (23%), Positives = 97/243 (39%), Gaps = 22/243 (9%)

Query: 569 DEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLL 628
           D   Y  L++L     N  + +  +E ML+AG+ PN  + N L+ +F R  +  DA    
Sbjct: 118 DVFTYNCLMNLLVAEKNYSQCYAIHEEMLKAGIAPNTFSFNILIRSFARTRRADDAVTCF 177

Query: 629 QGMLNLGLKPSLQTYTLLLSC-CTEARSPYDMGFCHELMAVSGHP----AHMFLLSMPSP 683
           + M     KP L T+ +L+ C C            HE+MA+   P     H  ++     
Sbjct: 178 EIMKRKRCKPDLHTFLILVDCLCKAGMDEKAFEVFHEMMAMGFVPPDRALHTAMVRTLLK 237

Query: 684 GPDGQNVRDHVGSFLEMMHSEDRESKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYP 743
               +  R+  G   +     D  +   ++D     L K+G  +EA  V +    K   P
Sbjct: 238 AKRVKEAREVFGQMEKCGFPPDAIAYNTMIDG----LAKAGHAQEALKVLDNMLAKACVP 293

Query: 744 DAVKEKGMSYWLINLHVMSDGTAVIALSRTLAWFRKQMLISGVGPSRI---DIVTGWGRR 800
             V     +Y ++   +   GT    L R    FR  M  SG  P+ +    ++ G+ + 
Sbjct: 294 TEV-----TYGILVNSLCKAGT----LERAEELFR-VMAASGFRPNSVIYTSLIHGFAKS 343

Query: 801 SRV 803
            R+
Sbjct: 344 GRM 346


>gi|326504498|dbj|BAJ91081.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 793

 Score =  207 bits (527), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 103/300 (34%), Positives = 168/300 (56%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           G   D +TY T++    R   +    K+ D+M   G +P+ VT+N L+  YG+A   +EA
Sbjct: 244 GIPLDRYTYNTLISCCRRGALYKEAAKVFDEMRAAGFEPDKVTFNSLLDVYGKARMHDEA 303

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
           + V K+M++ GC P  VTY +LI  + K G L  A ++ ++M+  G+ PD  TY+ +I+ 
Sbjct: 304 IGVLKEMELGGCPPSVVTYNSLISSYVKDGLLKEAAELKEEMEVKGIQPDVITYTTLISG 363

Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPD 534
           L +AG + AA   + EM+  GC PNL TYN +I L      +   + ++ D+++AGF PD
Sbjct: 364 LDRAGKIDAAIGTYDEMLRNGCKPNLCTYNALIKLHGVRGKFPEMMAVFDDLRSAGFVPD 423

Query: 535 KVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYE 594
            VT++ ++ V G  G   E   VF EM++  +VP+   Y  L+  + + G   ++ E Y+
Sbjct: 424 VVTWNTLLAVFGQNGLDSEVSGVFKEMKKSGYVPERDTYVSLISSYSRCGLFDQSMEIYK 483

Query: 595 AMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEAR 654
            M++AG+ P++ T N++LSA  R G+   A  L   M NL  +P   +Y+ LL     A+
Sbjct: 484 RMIEAGIYPDISTYNAVLSALARGGRWEQAEKLFAEMENLDCRPDELSYSSLLHAYANAK 543



 Score =  140 bits (352), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 91/328 (27%), Positives = 151/328 (46%), Gaps = 35/328 (10%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYG-------- 406
           G + D  TYTT++  L RA +  A     D+M+R+GC+PN+ TYN LI  +G        
Sbjct: 349 GIQPDVITYTTLISGLDRAGKIDAAIGTYDEMLRNGCKPNLCTYNALIKLHGVRGKFPEM 408

Query: 407 ----------------------RANYLNEALD-----VFKQMQVVGCEPDRVTYCTLIDI 439
                                  A +    LD     VFK+M+  G  P+R TY +LI  
Sbjct: 409 MAVFDDLRSAGFVPDVVTWNTLLAVFGQNGLDSEVSGVFKEMKKSGYVPERDTYVSLISS 468

Query: 440 HAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPN 499
           +++ G  D +M++YK+M  AG+ PD  TY+ +++ L + G  + A +LF EM N  C P+
Sbjct: 469 YSRCGLFDQSMEIYKRMIEAGIYPDISTYNAVLSALARGGRWEQAEKLFAEMENLDCRPD 528

Query: 500 LVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFA 559
            ++Y+ ++   A A+       L  D+     E        ++ V      L E E  F 
Sbjct: 529 ELSYSSLLHAYANAKKLDKMKALSEDIYAEKIESHHGLVKTLVLVNSKVNNLSETEKAFL 588

Query: 560 EMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVG 619
           E+ R+    D  V   +V ++GK   V+K  E    M  + +  +  T NSL+  + R+G
Sbjct: 589 ELGRRRCSLDINVLNAMVSVYGKNRMVKKVEEILSLMKGSSINLSTATYNSLMHMYSRLG 648

Query: 620 QLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
                 ++L  + + G +P   +Y  ++
Sbjct: 649 DCEKCENILTEIKSSGARPDRYSYNTMI 676



 Score =  130 bits (327), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 100/375 (26%), Positives = 168/375 (44%), Gaps = 50/375 (13%)

Query: 260 DAKVVECVSERFSKPSREMKIPAGLAPFSRHFAS-------TGNVVESV-SRILRQWKWG 311
           DA     +   FS+ SR       +A F R  A+       T NVV  V S+I   WK  
Sbjct: 177 DASAYTALVSAFSRASR---FRDAVAVFRRMVANGIQPAIVTYNVVLHVYSKIAVPWKDV 233

Query: 312 PLAEEALGNTNYSMDAYQANQVL---KQLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVG 368
               +++ N    +D Y  N ++   ++   +  A   F+ +R  AGF+ D+ T+ +++ 
Sbjct: 234 VALVDSMKNDGIPLDRYTYNTLISCCRRGALYKEAAKVFDEMR-AAGFEPDKVTFNSLLD 292

Query: 369 ILGRARQ----FGAI---------------NKLLDQMVRDG----------------CQP 393
           + G+AR      G +               N L+   V+DG                 QP
Sbjct: 293 VYGKARMHDEAIGVLKEMELGGCPPSVVTYNSLISSYVKDGLLKEAAELKEEMEVKGIQP 352

Query: 394 NVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMY 453
           +V+TY  LI    RA  ++ A+  + +M   GC+P+  TY  LI +H   G     M ++
Sbjct: 353 DVITYTTLISGLDRAGKIDAAIGTYDEMLRNGCKPNLCTYNALIKLHGVRGKFPEMMAVF 412

Query: 454 KKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKA 513
             +++AG  PD  T++ ++   G+ G       +F EM   G +P   TY  +I+  ++ 
Sbjct: 413 DDLRSAGFVPDVVTWNTLLAVFGQNGLDSEVSGVFKEMKKSGYVPERDTYVSLISSYSRC 472

Query: 514 RNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVY 573
             +  ++++Y+ M  AG  PD  TY+ V+  L   G  ++AE +FAEM   +  PDE  Y
Sbjct: 473 GLFDQSMEIYKRMIEAGIYPDISTYNAVLSALARGGRWEQAEKLFAEMENLDCRPDELSY 532

Query: 574 GLLVDLWGKAGNVRK 588
             L+  +  A  + K
Sbjct: 533 SSLLHAYANAKKLDK 547



 Score =  122 bits (305), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 80/293 (27%), Positives = 131/293 (44%), Gaps = 36/293 (12%)

Query: 392 QPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEP----------------------- 428
           +P+   Y  L+ ++ RA+   +A+ VF++M   G +P                       
Sbjct: 175 EPDASAYTALVSAFSRASRFRDAVAVFRRMVANGIQPAIVTYNVVLHVYSKIAVPWKDVV 234

Query: 429 -------------DRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCL 475
                        DR TY TLI    +      A  ++ +M+AAG  PD  T++ +++  
Sbjct: 235 ALVDSMKNDGIPLDRYTYNTLISCCRRGALYKEAAKVFDEMRAAGFEPDKVTFNSLLDVY 294

Query: 476 GKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDK 535
           GKA     A  +  EM   GC P++VTYN +I+   K    + A +L  +M+  G +PD 
Sbjct: 295 GKARMHDEAIGVLKEMELGGCPPSVVTYNSLISSYVKDGLLKEAAELKEEMEVKGIQPDV 354

Query: 536 VTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEA 595
           +TY+ ++  L   G +D A   + EM R    P+   Y  L+ L G  G   +    ++ 
Sbjct: 355 ITYTTLISGLDRAGKIDAAIGTYDEMLRNGCKPNLCTYNALIKLHGVRGKFPEMMAVFDD 414

Query: 596 MLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
           +  AG  P+V T N+LL+ F + G  S+   + + M   G  P   TY  L+S
Sbjct: 415 LRSAGFVPDVVTWNTLLAVFGQNGLDSEVSGVFKEMKKSGYVPERDTYVSLIS 467



 Score =  114 bits (286), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 64/303 (21%), Positives = 142/303 (46%), Gaps = 1/303 (0%)

Query: 345 GFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHS 404
           G F  +++ +G+  +  TY +++    R   F    ++  +M+  G  P++ TYN ++ +
Sbjct: 445 GVFKEMKK-SGYVPERDTYVSLISSYSRCGLFDQSMEIYKRMIEAGIYPDISTYNAVLSA 503

Query: 405 YGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPD 464
             R     +A  +F +M+ + C PD ++Y +L+  +A A  LD    + + + A  +   
Sbjct: 504 LARGGRWEQAEKLFAEMENLDCRPDELSYSSLLHAYANAKKLDKMKALSEDIYAEKIESH 563

Query: 465 TFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYR 524
                 ++    K  +L    + F E+  + C  ++   N M+++  K R  +   ++  
Sbjct: 564 HGLVKTLVLVNSKVNNLSETEKAFLELGRRRCSLDINVLNAMVSVYGKNRMVKKVEEILS 623

Query: 525 DMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAG 584
            M+ +       TY+ +M +    G  ++ E +  E++     PD   Y  ++  +G+ G
Sbjct: 624 LMKGSSINLSTATYNSLMHMYSRLGDCEKCENILTEIKSSGARPDRYSYNTMIYAYGRKG 683

Query: 585 NVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYT 644
            +++A   +  M  +GL P++ T N  + +++      +A  L++ M+  G KP+ +TY 
Sbjct: 684 QMKEASRLFSEMKSSGLIPDIVTYNIFVKSYVANSMFEEAIDLVRYMVTRGCKPNERTYN 743

Query: 645 LLL 647
            +L
Sbjct: 744 SIL 746



 Score =  101 bits (251), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 81/293 (27%), Positives = 136/293 (46%), Gaps = 21/293 (7%)

Query: 463 PDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAK-ARNYQSALK 521
           PD   Y+ +++   +A   + A  +F  MV  G  P +VTYN+++ + +K A  ++  + 
Sbjct: 176 PDASAYTALVSAFSRASRFRDAVAVFRRMVANGIQPAIVTYNVVLHVYSKIAVPWKDVVA 235

Query: 522 LYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWG 581
           L   M+N G   D+ TY+ ++          EA  VF EMR   + PD+  +  L+D++G
Sbjct: 236 LVDSMKNDGIPLDRYTYNTLISCCRRGALYKEAAKVFDEMRAAGFEPDKVTFNSLLDVYG 295

Query: 582 KAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQ 641
           KA    +A    + M   G  P+V T NSL+S++++ G L +A  L + M   G++P + 
Sbjct: 296 KARMHDEAIGVLKEMELGGCPPSVVTYNSLISSYVKDGLLKEAAELKEEMEVKGIQPDVI 355

Query: 642 TYTLLLSCCTEA-RSPYDMGFCHELMAVSGHP---AHMFLLSMPSPGPDGQNVRDHVGSF 697
           TYT L+S    A +    +G   E++     P    +  L+ +         VR   G F
Sbjct: 356 TYTTLISGLDRAGKIDAAIGTYDEMLRNGCKPNLCTYNALIKL-------HGVR---GKF 405

Query: 698 LEMMHSEDRESKRGLVDAVVDF------LHKSGLKEEAGSVWEVAAQKNVYPD 744
            EMM   D     G V  VV +        ++GL  E   V++   +    P+
Sbjct: 406 PEMMAVFDDLRSAGFVPDVVTWNTLLAVFGQNGLDSEVSGVFKEMKKSGYVPE 458



 Score = 99.4 bits (246), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 61/282 (21%), Positives = 130/282 (46%)

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
           +AG   D  TY  ++  L R  ++    KL  +M    C+P+ ++Y+ L+H+Y  A  L+
Sbjct: 487 EAGIYPDISTYNAVLSALARGGRWEQAEKLFAEMENLDCRPDELSYSSLLHAYANAKKLD 546

Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
           +   + + +     E       TL+ +++K   L      + ++     S D    + ++
Sbjct: 547 KMKALSEDIYAEKIESHHGLVKTLVLVNSKVNNLSETEKAFLELGRRRCSLDINVLNAMV 606

Query: 473 NCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFE 532
           +  GK   ++   ++   M       +  TYN ++ + ++  + +    +  +++++G  
Sbjct: 607 SVYGKNRMVKKVEEILSLMKGSSINLSTATYNSLMHMYSRLGDCEKCENILTEIKSSGAR 666

Query: 533 PDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEW 592
           PD+ +Y+ ++   G  G + EA  +F+EM+    +PD   Y + V  +       +A + 
Sbjct: 667 PDRYSYNTMIYAYGRKGQMKEASRLFSEMKSSGLIPDIVTYNIFVKSYVANSMFEEAIDL 726

Query: 593 YEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNL 634
              M+  G +PN  T NS+L  + R G+++DA   L  +  L
Sbjct: 727 VRYMVTRGCKPNERTYNSILQEYCRHGKIADAKSFLSNLPQL 768



 Score = 63.9 bits (154), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 28/93 (30%), Positives = 51/93 (54%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           + +G + D ++Y TM+   GR  Q    ++L  +M   G  P++VTYN  + SY   +  
Sbjct: 661 KSSGARPDRYSYNTMIYAYGRKGQMKEASRLFSEMKSSGLIPDIVTYNIFVKSYVANSMF 720

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAG 444
            EA+D+ + M   GC+P+  TY +++  + + G
Sbjct: 721 EEAIDLVRYMVTRGCKPNERTYNSILQEYCRHG 753



 Score = 45.1 bits (105), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 46/188 (24%), Positives = 76/188 (40%), Gaps = 17/188 (9%)

Query: 568 PDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVG-QLSDAYH 626
           PD   Y  LV  + +A   R A   +  M+  G++P + T N +L  + ++     D   
Sbjct: 176 PDASAYTALVSAFSRASRFRDAVAVFRRMVANGIQPAIVTYNVVLHVYSKIAVPWKDVVA 235

Query: 627 LLQGMLNLGLKPSLQTYTLLLSCC------TEARSPYDMGFCHELMAVSGHPAHMFLLSM 680
           L+  M N G+     TY  L+SCC       EA   +D     E+ A    P  +   S+
Sbjct: 236 LVDSMKNDGIPLDRYTYNTLISCCRRGALYKEAAKVFD-----EMRAAGFEPDKVTFNSL 290

Query: 681 PSPGPDGQNVRDHVGSFLEMMHSEDRESKRGLV--DAVVDFLHKSGLKEEAGSVWEVAAQ 738
                  +   + +G   EM   E       +V  ++++    K GL +EA  + E    
Sbjct: 291 LDVYGKARMHDEAIGVLKEM---ELGGCPPSVVTYNSLISSYVKDGLLKEAAELKEEMEV 347

Query: 739 KNVYPDAV 746
           K + PD +
Sbjct: 348 KGIQPDVI 355


>gi|302775294|ref|XP_002971064.1| hypothetical protein SELMODRAFT_95253 [Selaginella moellendorffii]
 gi|300161046|gb|EFJ27662.1| hypothetical protein SELMODRAFT_95253 [Selaginella moellendorffii]
          Length = 814

 Score =  207 bits (527), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 136/520 (26%), Positives = 235/520 (45%), Gaps = 59/520 (11%)

Query: 273 KPSREMKIPAGLAPFSRHFASTGNVVESVSRI-LRQWKW---------GPLAEEALGNTN 322
           KP RE   P     F R      ++VE++  + L    W         GP+  + LG+  
Sbjct: 34  KPEREHLTP----DFVRRADLVTSIVETIKDVRLDGSSWSVHNIRNVLGPVHGQVLGS-- 87

Query: 323 YSMDAYQANQVLKQLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKL 382
                     VL+ L+    A+ FF W   QAGF+HD  TY  ++ +L   + +     +
Sbjct: 88  ------HVAAVLRSLKVTGTAISFFRWAGEQAGFQHDVFTYNCLMNLLVAEKNYSQCYAI 141

Query: 383 LDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAK 442
            ++M++ G  PN  ++N LI S+ R    ++A+  F+ M+   C+PD  T+  L+D   K
Sbjct: 142 HEEMLKAGIAPNTFSFNILIRSFARTRRADDAVTCFEIMKRKRCKPDLHTFLILVDCLCK 201

Query: 443 AGFLDVAMDMYKKMQA------------------------------------AGLSPDTF 466
           AG  + A +++ +M A                                     G  PD  
Sbjct: 202 AGMDEKAFEVFHEMMAMGFVPPDRALHTAMVRTLLKAKRVKEAREVFGQMEKCGFPPDAI 261

Query: 467 TYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDM 526
            Y+ +I+ L KAGH Q A ++   M+ + C+P  VTY I++    KA   + A +L+R M
Sbjct: 262 AYNTMIDGLAKAGHAQEALKVLDNMLAKACVPTEVTYGILVNSLCKAGTLERAEELFRVM 321

Query: 527 QNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNV 586
             +GF P+ V Y+ ++      G + EA ++F EM    + PD   + +++D   K+GN 
Sbjct: 322 AASGFRPNSVIYTSLIHGFAKSGRMKEACSLFDEMVEAGYRPDVITHTVMIDGLCKSGNF 381

Query: 587 RKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLL 646
            +A + +E M++ G +PNV T  +++    ++G++++A+ +++GM+  G  P   TY  L
Sbjct: 382 EQAAKSFEEMMRGGCKPNVVTYTTIIQGLSKIGRVANAFRIMKGMIAHGCFPDSVTYICL 441

Query: 647 L-SCCTEARSPYDMGFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSED 705
           L   C   R         EL   S  P      S+ +   DG +V   +    E   +  
Sbjct: 442 LDGFCKLGRLDEAAQLLDELDKCSSSPNLQLYSSLVNGLCDGGSVEKTLDDLFEQSKAAA 501

Query: 706 RESKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDA 745
                GL  +++  L K+G  +EA  +++    +   PDA
Sbjct: 502 ETLDPGLCCSIIVGLCKTGRLDEACRIFQRMVSEGCKPDA 541



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 94/297 (31%), Positives = 153/297 (51%), Gaps = 1/297 (0%)

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
           + GF  D   Y TM+  L +A       K+LD M+   C P  VTY  L++S  +A  L 
Sbjct: 253 KCGFPPDAIAYNTMIDGLAKAGHAQEALKVLDNMLAKACVPTEVTYGILVNSLCKAGTLE 312

Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
            A ++F+ M   G  P+ V Y +LI   AK+G +  A  ++ +M  AG  PD  T++V+I
Sbjct: 313 RAEELFRVMAASGFRPNSVIYTSLIHGFAKSGRMKEACSLFDEMVEAGYRPDVITHTVMI 372

Query: 473 NCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFE 532
           + L K+G+ + A + F EM+  GC PN+VTY  +I   +K     +A ++ + M   G  
Sbjct: 373 DGLCKSGNFEQAAKSFEEMMRGGCKPNVVTYTTIIQGLSKIGRVANAFRIMKGMIAHGCF 432

Query: 533 PDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAW-E 591
           PD VTY  +++     G LDEA  +  E+ + +  P+  +Y  LV+     G+V K   +
Sbjct: 433 PDSVTYICLLDGFCKLGRLDEAAQLLDELDKCSSSPNLQLYSSLVNGLCDGGSVEKTLDD 492

Query: 592 WYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
            +E    A    +   C S++    + G+L +A  + Q M++ G KP   TY +L++
Sbjct: 493 LFEQSKAAAETLDPGLCCSIIVGLCKTGRLDEACRIFQRMVSEGCKPDATTYNILIN 549



 Score =  151 bits (382), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 96/333 (28%), Positives = 151/333 (45%), Gaps = 38/333 (11%)

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
           +AG++ D  T+T M+  L ++  F    K  ++M+R GC+PNVVTY  +I    +   + 
Sbjct: 358 EAGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGGCKPNVVTYTTIIQGLSKIGRVA 417

Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
            A  + K M   GC PD VTY  L+D   K G LD A  +  ++     SP+   YS ++
Sbjct: 418 NAFRIMKGMIAHGCFPDSVTYICLLDGFCKLGRLDEAAQLLDELDKCSSSPNLQLYSSLV 477

Query: 473 N-------------------------------C-----LGKAGHLQAAHQLFCEMVNQGC 496
           N                               C     L K G L  A ++F  MV++GC
Sbjct: 478 NGLCDGGSVEKTLDDLFEQSKAAAETLDPGLCCSIIVGLCKTGRLDEACRIFQRMVSEGC 537

Query: 497 IPNLVTYNIMIALQAKARN--YQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEA 554
            P+  TYNI+I    ++R    + A  L  D++  G+ PD VTY+ +   L   G +D A
Sbjct: 538 KPDATTYNILINGLCRSRENRVERAFALLHDLEKVGYLPDAVTYTPLCIGLCKIGEVDRA 597

Query: 555 EAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSA 614
             +  E   + W  D   Y  L       G V +A   ++ M++ G  P+      +++ 
Sbjct: 598 VKMLEEASSRGWNADVVAYTALCTGLCYQGQVDRAVSLFQEMVRQGGAPDAAAYCCIING 657

Query: 615 FLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
            ++V +L DA      M+  G KP++ TYT L+
Sbjct: 658 LIKVKKLEDACKFFDEMIGKGQKPTVATYTALV 690



 Score =  128 bits (322), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 85/270 (31%), Positives = 128/270 (47%), Gaps = 3/270 (1%)

Query: 381 KLLDQMVRDGCQPNVVTYNRLIHSYGRA--NYLNEALDVFKQMQVVGCEPDRVTYCTLID 438
           ++  +MV +GC+P+  TYN LI+   R+  N +  A  +   ++ VG  PD VTY  L  
Sbjct: 527 RIFQRMVSEGCKPDATTYNILINGLCRSRENRVERAFALLHDLEKVGYLPDAVTYTPLCI 586

Query: 439 IHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIP 498
              K G +D A+ M ++  + G + D   Y+ +   L   G +  A  LF EMV QG  P
Sbjct: 587 GLCKIGEVDRAVKMLEEASSRGWNADVVAYTALCTGLCYQGQVDRAVSLFQEMVRQGGAP 646

Query: 499 NLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVF 558
           +   Y  +I    K +  + A K + +M   G +P   TY+ +++ L H G +DEA   F
Sbjct: 647 DAAAYCCIINGLIKVKKLEDACKFFDEMIGKGQKPTVATYTALVQALCHAGNVDEAFHRF 706

Query: 559 AEM-RRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLR 617
             M  R   V    +Y  L+  + KA  V  A + +E M+  G  P   T  SL    +R
Sbjct: 707 ESMLARGELVGSVMIYDALIHGFCKALKVDAALKLFEDMISRGNVPTAVTSASLFDGLVR 766

Query: 618 VGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
            G+   A  LLQ M   G  P   T+T +L
Sbjct: 767 SGKTEKAQELLQEMAAGGSPPHAATFTAIL 796



 Score = 82.0 bits (201), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 58/227 (25%), Positives = 104/227 (45%), Gaps = 1/227 (0%)

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
           + G+  D  TYT +   L +  +     K+L++    G   +VV Y  L         ++
Sbjct: 571 KVGYLPDAVTYTPLCIGLCKIGEVDRAVKMLEEASSRGWNADVVAYTALCTGLCYQGQVD 630

Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
            A+ +F++M   G  PD   YC +I+   K   L+ A   + +M   G  P   TY+ ++
Sbjct: 631 RAVSLFQEMVRQGGAPDAAAYCCIINGLIKVKKLEDACKFFDEMIGKGQKPTVATYTALV 690

Query: 473 NCLGKAGHLQAAHQLFCEMVNQG-CIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF 531
             L  AG++  A   F  M+ +G  + +++ Y+ +I    KA    +ALKL+ DM + G 
Sbjct: 691 QALCHAGNVDEAFHRFESMLARGELVGSVMIYDALIHGFCKALKVDAALKLFEDMISRGN 750

Query: 532 EPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVD 578
            P  VT + + + L   G  ++A+ +  EM      P    +  ++D
Sbjct: 751 VPTAVTSASLFDGLVRSGKTEKAQELLQEMAAGGSPPHAATFTAILD 797



 Score = 54.3 bits (129), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 58/243 (23%), Positives = 97/243 (39%), Gaps = 22/243 (9%)

Query: 569 DEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLL 628
           D   Y  L++L     N  + +  +E ML+AG+ PN  + N L+ +F R  +  DA    
Sbjct: 118 DVFTYNCLMNLLVAEKNYSQCYAIHEEMLKAGIAPNTFSFNILIRSFARTRRADDAVTCF 177

Query: 629 QGMLNLGLKPSLQTYTLLLSC-CTEARSPYDMGFCHELMAVSGHP----AHMFLLSMPSP 683
           + M     KP L T+ +L+ C C            HE+MA+   P     H  ++     
Sbjct: 178 EIMKRKRCKPDLHTFLILVDCLCKAGMDEKAFEVFHEMMAMGFVPPDRALHTAMVRTLLK 237

Query: 684 GPDGQNVRDHVGSFLEMMHSEDRESKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYP 743
               +  R+  G   +     D  +   ++D     L K+G  +EA  V +    K   P
Sbjct: 238 AKRVKEAREVFGQMEKCGFPPDAIAYNTMIDG----LAKAGHAQEALKVLDNMLAKACVP 293

Query: 744 DAVKEKGMSYWLINLHVMSDGTAVIALSRTLAWFRKQMLISGVGPSRI---DIVTGWGRR 800
             V     +Y ++   +   GT    L R    FR  M  SG  P+ +    ++ G+ + 
Sbjct: 294 TEV-----TYGILVNSLCKAGT----LERAEELFR-VMAASGFRPNSVIYTSLIHGFAKS 343

Query: 801 SRV 803
            R+
Sbjct: 344 GRM 346


>gi|168034142|ref|XP_001769572.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162679114|gb|EDQ65565.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 871

 Score =  205 bits (522), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 152/519 (29%), Positives = 241/519 (46%), Gaps = 30/519 (5%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           G + D  TY T++  + +  Q      ++  M      PNVVTY+ +I  YG+     EA
Sbjct: 335 GIEQDIFTYNTLIDAVCKGGQMELAASIMSSMRLKNISPNVVTYSTMIDGYGKLGCFEEA 394

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
           + ++  M+  G  PDRV+Y TLIDI+AK G  D A+   K M+  GL  D  TY+ +I+ 
Sbjct: 395 IGLYHDMKESGVRPDRVSYNTLIDIYAKLGRFDDALTACKDMERVGLKADVVTYNALIDA 454

Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPD 534
            GK G  + A  LF +M  +G +PN++TY+ +I   +KA  +Q A  ++ + + AG +PD
Sbjct: 455 YGKQGKYKDAAGLFDKMKAEGLVPNVLTYSALIDAYSKAGMHQDATSIFVEFKRAGLKPD 514

Query: 535 KVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNV-----RKA 589
            V YS +++    CG +++A  +  EM +    P+   Y  L+D +G+ G V      K 
Sbjct: 515 VVLYSSLIDSCCKCGLVEDAVVLLQEMTQAGIQPNIVTYNSLIDAYGRNGQVDNVEAAKG 574

Query: 590 WEWYEAMLQAGLRPNVPTCNSLLS---AFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLL 646
                   + G R     C +L S   A    G L+ A  +   M   GLKP++ T++ +
Sbjct: 575 NMPINVFNKVGDRSTEIICKTLTSQQNANDHTGVLA-AVSVFHEMQQFGLKPNVVTFSAI 633

Query: 647 LSCCTEARSPYDMGFCHELMA-----VSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMM 701
           L+ C+   S  +     E M      V G  AH  L+ +          R+HV    + +
Sbjct: 634 LNACSRCSSLQEASVLLEQMRFFDSWVYG-IAHGLLMGL----------REHVWVEAQRL 682

Query: 702 HSE----DRESKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAVKEKGMSYWLIN 757
             E    D  +     +A+ D L   G ++ A  V   A ++ V+ +A       + L +
Sbjct: 683 FDEIARMDYATGAAFYNALTDVLWHFGQRQGAQEVVVAAKRRQVWENAWWRSEQQFCL-D 741

Query: 758 LHVMSDGTAVIALSRTLAWFRKQMLISGVGPSRIDIVTGWGRRSRVTGTSLVRQAVQELL 817
           LH+MS G A   L   L   R  +      P  + I+TGWG+ S+V G S V++AV+  L
Sbjct: 742 LHLMSVGAAQAMLHVWLLDLRALVWDGHALPRVLSILTGWGKHSKVAGFSTVKRAVESRL 801

Query: 818 HMFSFPFFTENGNSGCFVGCGEPLNKWLLQSYVDRMHLL 856
                PF     N G  V  G  +  WL      ++ +L
Sbjct: 802 LEIKAPFQVGRYNEGRLVCAGHIVRAWLGDPRTSKLLML 840



 Score =  195 bits (496), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 115/370 (31%), Positives = 195/370 (52%), Gaps = 6/370 (1%)

Query: 283 GLAPFSRHFASTGNVVESVSRILRQWKWGPLAEEALGNTNYSMDAYQANQVLKQLQDHTV 342
           GL  F       GN  E   R L+ ++W  + ++    + +S  A      L +L    +
Sbjct: 161 GLEDFPYLLRELGNRGEW-ERALQGYEW--MVQQGHLRSEWSKLASIMISTLGRLGKVEI 217

Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLI 402
           AL  FN   ++AGF ++ + Y+ MV   GR+ +     K+   M + GC+PN++TYN +I
Sbjct: 218 ALDVFN-RAQKAGFGNNVYAYSAMVSAYGRSGRCREALKVFQAMKKAGCKPNLITYNTII 276

Query: 403 HSYGRANY-LNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGL 461
            + G+    L +ALD+F++MQ  G EPDR+T+ +LI + ++    + +  ++ +MQ  G+
Sbjct: 277 DACGKGGVDLKKALDIFEEMQKEGVEPDRITFNSLIAVCSRGSLWEDSQRVFAEMQRRGI 336

Query: 462 SPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALK 521
             D FTY+ +I+ + K G ++ A  +   M  +   PN+VTY+ MI    K   ++ A+ 
Sbjct: 337 EQDIFTYNTLIDAVCKGGQMELAASIMSSMRLKNISPNVVTYSTMIDGYGKLGCFEEAIG 396

Query: 522 LYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWG 581
           LY DM+ +G  PD+V+Y+ ++++    G  D+A     +M R     D   Y  L+D +G
Sbjct: 397 LYHDMKESGVRPDRVSYNTLIDIYAKLGRFDDALTACKDMERVGLKADVVTYNALIDAYG 456

Query: 582 KAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQ 641
           K G  + A   ++ M   GL PNV T ++L+ A+ + G   DA  +       GLKP + 
Sbjct: 457 KQGKYKDAAGLFDKMKAEGLVPNVLTYSALIDAYSKAGMHQDATSIFVEFKRAGLKPDVV 516

Query: 642 TYTLLL-SCC 650
            Y+ L+ SCC
Sbjct: 517 LYSSLIDSCC 526


>gi|414887392|tpg|DAA63406.1| TPA: hypothetical protein ZEAMMB73_124662 [Zea mays]
          Length = 795

 Score =  204 bits (520), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 100/303 (33%), Positives = 169/303 (55%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           ++ G + D +TY T++    R        ++ D+M   G +P+ VT+N L+  YG+A   
Sbjct: 247 KEDGIERDRYTYNTLISCCRRRGLHREAAQVFDEMKAAGFEPDKVTFNSLLDVYGKARKH 306

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
            EA+ V K+M+  GC P  VTY +LI  + K G L+ A+++ ++M+  G+ PD  TY+ +
Sbjct: 307 EEAIGVLKRMENAGCTPSVVTYNSLISAYVKDGLLEEALELKQEMEFRGMKPDVVTYTTL 366

Query: 472 INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF 531
           I+ L + G + AA   + EMV  GC PNL TYN +I L      +   + ++ D+++AG+
Sbjct: 367 ISGLDRVGKIDAALATYSEMVRNGCSPNLCTYNALIKLHGVRGKFTEMMAVFDDLRSAGY 426

Query: 532 EPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWE 591
            PD VT++ ++ V G  G   E   VF EM++  ++P+   Y  L+  + + G   +A E
Sbjct: 427 VPDVVTWNTLLSVFGQNGLDSEVSGVFKEMKKAGYIPERDTYVSLISSYSRCGLFDQAME 486

Query: 592 WYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCT 651
            Y+ M++AG+ P++ T N++LSA  R G+   A  L   M++   KP   +Y+ LL    
Sbjct: 487 IYKRMIEAGIYPDISTYNAVLSALARGGRWEQAEKLFAEMVDRDCKPDELSYSSLLHAYA 546

Query: 652 EAR 654
            A+
Sbjct: 547 NAK 549



 Score =  160 bits (405), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 96/291 (32%), Positives = 149/291 (51%), Gaps = 1/291 (0%)

Query: 359 DEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANY-LNEALDV 417
           D   YT +V    RA +F     +  +MV  G QP +VTYN + H+Y + +    E + +
Sbjct: 183 DASAYTALVSAFSRAGRFRDAVAVFQRMVDGGVQPALVTYNVVFHAYSKMSVPWKEVVAL 242

Query: 418 FKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGK 477
              M+  G E DR TY TLI    + G    A  ++ +M+AAG  PD  T++ +++  GK
Sbjct: 243 VDSMKEDGIERDRYTYNTLISCCRRRGLHREAAQVFDEMKAAGFEPDKVTFNSLLDVYGK 302

Query: 478 AGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVT 537
           A   + A  +   M N GC P++VTYN +I+   K    + AL+L ++M+  G +PD VT
Sbjct: 303 ARKHEEAIGVLKRMENAGCTPSVVTYNSLISAYVKDGLLEEALELKQEMEFRGMKPDVVT 362

Query: 538 YSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAML 597
           Y+ ++  L   G +D A A ++EM R    P+   Y  L+ L G  G   +    ++ + 
Sbjct: 363 YTTLISGLDRVGKIDAALATYSEMVRNGCSPNLCTYNALIKLHGVRGKFTEMMAVFDDLR 422

Query: 598 QAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
            AG  P+V T N+LLS F + G  S+   + + M   G  P   TY  L+S
Sbjct: 423 SAGYVPDVVTWNTLLSVFGQNGLDSEVSGVFKEMKKAGYIPERDTYVSLIS 473



 Score =  149 bits (376), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 93/328 (28%), Positives = 153/328 (46%), Gaps = 35/328 (10%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYG-------- 406
           G K D  TYTT++  L R  +  A      +MVR+GC PN+ TYN LI  +G        
Sbjct: 355 GMKPDVVTYTTLISGLDRVGKIDAALATYSEMVRNGCSPNLCTYNALIKLHGVRGKFTEM 414

Query: 407 --------RANYL-------------------NEALDVFKQMQVVGCEPDRVTYCTLIDI 439
                    A Y+                   +E   VFK+M+  G  P+R TY +LI  
Sbjct: 415 MAVFDDLRSAGYVPDVVTWNTLLSVFGQNGLDSEVSGVFKEMKKAGYIPERDTYVSLISS 474

Query: 440 HAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPN 499
           +++ G  D AM++YK+M  AG+ PD  TY+ +++ L + G  + A +LF EMV++ C P+
Sbjct: 475 YSRCGLFDQAMEIYKRMIEAGIYPDISTYNAVLSALARGGRWEQAEKLFAEMVDRDCKPD 534

Query: 500 LVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFA 559
            ++Y+ ++   A A+       L  D+     E        ++ V      L E E  F 
Sbjct: 535 ELSYSSLLHAYANAKKLDKMKTLSEDIYAERIERHNWLVKTLVLVNNKVNNLPETEKAFQ 594

Query: 560 EMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVG 619
           E+RR+    D  V   +V ++GK   V+K  E    M++  +  +  T NSL+  + R+G
Sbjct: 595 ELRRRRCSLDINVLNAMVSIYGKNKMVKKVEEVLSLMMENSINHSAATYNSLMHMYSRLG 654

Query: 620 QLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
                  +L  + + G++P   +Y  ++
Sbjct: 655 DCEKCESILTEIKSSGMRPDRYSYNTVI 682



 Score =  124 bits (312), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 89/334 (26%), Positives = 153/334 (45%), Gaps = 40/334 (11%)

Query: 294 TGNVV-ESVSRILRQWKWGPLAEEALGNTNYSMDAYQANQVL---KQLQDHTVALGFFNW 349
           T NVV  + S++   WK      +++       D Y  N ++   ++   H  A   F+ 
Sbjct: 221 TYNVVFHAYSKMSVPWKEVVALVDSMKEDGIERDRYTYNTLISCCRRRGLHREAAQVFDE 280

Query: 350 LRRQAGFKHDEHTYTTMVGILGRARQ----FGAI---------------NKLLDQMVRDG 390
           ++  AGF+ D+ T+ +++ + G+AR+     G +               N L+   V+DG
Sbjct: 281 MK-AAGFEPDKVTFNSLLDVYGKARKHEEAIGVLKRMENAGCTPSVVTYNSLISAYVKDG 339

Query: 391 C----------------QPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYC 434
                            +P+VVTY  LI    R   ++ AL  + +M   GC P+  TY 
Sbjct: 340 LLEEALELKQEMEFRGMKPDVVTYTTLISGLDRVGKIDAALATYSEMVRNGCSPNLCTYN 399

Query: 435 TLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQ 494
            LI +H   G     M ++  +++AG  PD  T++ +++  G+ G       +F EM   
Sbjct: 400 ALIKLHGVRGKFTEMMAVFDDLRSAGYVPDVVTWNTLLSVFGQNGLDSEVSGVFKEMKKA 459

Query: 495 GCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEA 554
           G IP   TY  +I+  ++   +  A+++Y+ M  AG  PD  TY+ V+  L   G  ++A
Sbjct: 460 GYIPERDTYVSLISSYSRCGLFDQAMEIYKRMIEAGIYPDISTYNAVLSALARGGRWEQA 519

Query: 555 EAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRK 588
           E +FAEM  ++  PDE  Y  L+  +  A  + K
Sbjct: 520 EKLFAEMVDRDCKPDELSYSSLLHAYANAKKLDK 553



 Score =  115 bits (287), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 72/215 (33%), Positives = 115/215 (53%), Gaps = 5/215 (2%)

Query: 435 TLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQ 494
           T I + A+AG L  A  + +    A  +PD   Y+ +++   +AG  + A  +F  MV+ 
Sbjct: 158 TAIRVFARAGCLAEASAILE----AAPAPDASAYTALVSAFSRAGRFRDAVAVFQRMVDG 213

Query: 495 GCIPNLVTYNIMIALQAK-ARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDE 553
           G  P LVTYN++    +K +  ++  + L   M+  G E D+ TY+ ++      G   E
Sbjct: 214 GVQPALVTYNVVFHAYSKMSVPWKEVVALVDSMKEDGIERDRYTYNTLISCCRRRGLHRE 273

Query: 554 AEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLS 613
           A  VF EM+   + PD+  +  L+D++GKA    +A    + M  AG  P+V T NSL+S
Sbjct: 274 AAQVFDEMKAAGFEPDKVTFNSLLDVYGKARKHEEAIGVLKRMENAGCTPSVVTYNSLIS 333

Query: 614 AFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
           A+++ G L +A  L Q M   G+KP + TYT L+S
Sbjct: 334 AYVKDGLLEEALELKQEMEFRGMKPDVVTYTTLIS 368



 Score =  108 bits (270), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 60/303 (19%), Positives = 142/303 (46%), Gaps = 1/303 (0%)

Query: 345 GFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHS 404
           G F  +++ AG+  +  TY +++    R   F    ++  +M+  G  P++ TYN ++ +
Sbjct: 451 GVFKEMKK-AGYIPERDTYVSLISSYSRCGLFDQAMEIYKRMIEAGIYPDISTYNAVLSA 509

Query: 405 YGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPD 464
             R     +A  +F +M    C+PD ++Y +L+  +A A  LD    + + + A  +   
Sbjct: 510 LARGGRWEQAEKLFAEMVDRDCKPDELSYSSLLHAYANAKKLDKMKTLSEDIYAERIERH 569

Query: 465 TFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYR 524
            +    ++    K  +L    + F E+  + C  ++   N M+++  K +  +   ++  
Sbjct: 570 NWLVKTLVLVNNKVNNLPETEKAFQELRRRRCSLDINVLNAMVSIYGKNKMVKKVEEVLS 629

Query: 525 DMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAG 584
            M          TY+ +M +    G  ++ E++  E++     PD   Y  ++  +G+ G
Sbjct: 630 LMMENSINHSAATYNSLMHMYSRLGDCEKCESILTEIKSSGMRPDRYSYNTVIYAYGRKG 689

Query: 585 NVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYT 644
            +++A   +  M  +G++P++ T N  + +++      +A  L++ ++  G +P+ +T+ 
Sbjct: 690 QMKEASRLFSEMKCSGVKPDIVTYNIFIKSYVANIMFEEAIDLVRYLVTQGCRPNERTFN 749

Query: 645 LLL 647
            +L
Sbjct: 750 SIL 752



 Score = 98.6 bits (244), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 60/279 (21%), Positives = 130/279 (46%)

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
           +AG   D  TY  ++  L R  ++    KL  +MV   C+P+ ++Y+ L+H+Y  A  L+
Sbjct: 493 EAGIYPDISTYNAVLSALARGGRWEQAEKLFAEMVDRDCKPDELSYSSLLHAYANAKKLD 552

Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
           +   + + +     E       TL+ ++ K   L      +++++    S D    + ++
Sbjct: 553 KMKTLSEDIYAERIERHNWLVKTLVLVNNKVNNLPETEKAFQELRRRRCSLDINVLNAMV 612

Query: 473 NCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFE 532
           +  GK   ++   ++   M+      +  TYN ++ + ++  + +    +  +++++G  
Sbjct: 613 SIYGKNKMVKKVEEVLSLMMENSINHSAATYNSLMHMYSRLGDCEKCESILTEIKSSGMR 672

Query: 533 PDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEW 592
           PD+ +Y+ V+   G  G + EA  +F+EM+     PD   Y + +  +       +A + 
Sbjct: 673 PDRYSYNTVIYAYGRKGQMKEASRLFSEMKCSGVKPDIVTYNIFIKSYVANIMFEEAIDL 732

Query: 593 YEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGM 631
              ++  G RPN  T NS+L  + R G++ +A   L  +
Sbjct: 733 VRYLVTQGCRPNERTFNSILQGYSRHGRMVEAKSFLSNL 771



 Score = 65.9 bits (159), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 38/170 (22%), Positives = 79/170 (46%), Gaps = 7/170 (4%)

Query: 322 NYSMDAYQANQVLKQLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINK 381
           N  +  Y  N+++K++++  ++L   N         H   TY +++ +  R         
Sbjct: 609 NAMVSIYGKNKMVKKVEE-VLSLMMEN------SINHSAATYNSLMHMYSRLGDCEKCES 661

Query: 382 LLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHA 441
           +L ++   G +P+  +YN +I++YGR   + EA  +F +M+  G +PD VTY   I  + 
Sbjct: 662 ILTEIKSSGMRPDRYSYNTVIYAYGRKGQMKEASRLFSEMKCSGVKPDIVTYNIFIKSYV 721

Query: 442 KAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEM 491
                + A+D+ + +   G  P+  T++ I+    + G +  A      +
Sbjct: 722 ANIMFEEAIDLVRYLVTQGCRPNERTFNSILQGYSRHGRMVEAKSFLSNL 771



 Score = 44.3 bits (103), Expect = 0.26,   Method: Compositional matrix adjust.
 Identities = 23/81 (28%), Positives = 46/81 (56%), Gaps = 4/81 (4%)

Query: 577 VDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGL 636
           + ++ +AG + +A     A+L+A   P+     +L+SAF R G+  DA  + Q M++ G+
Sbjct: 160 IRVFARAGCLAEA----SAILEAAPAPDASAYTALVSAFSRAGRFRDAVAVFQRMVDGGV 215

Query: 637 KPSLQTYTLLLSCCTEARSPY 657
           +P+L TY ++    ++   P+
Sbjct: 216 QPALVTYNVVFHAYSKMSVPW 236


>gi|357122161|ref|XP_003562784.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g02860-like [Brachypodium distachyon]
          Length = 791

 Score =  204 bits (519), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 103/303 (33%), Positives = 168/303 (55%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           R+ G   D +TY T++    R   +    K+ D+M   G +P+ VT N L+  YG+A   
Sbjct: 239 RKDGIPLDRYTYNTLISCCRRRALYKEAAKVFDEMRAAGFEPDKVTLNSLLDVYGKARRY 298

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
           +EA+ V K+M+  GC P  VTY +LI  + K G L+ A  + ++M+  G+ PD  TY+ +
Sbjct: 299 DEAIGVLKEMEQGGCPPSVVTYNSLISSYVKDGLLEEATQLKEEMEVKGIEPDVITYTTL 358

Query: 472 INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF 531
           ++ L +AG + AA   + EM+  GC PNL TYN +I L      +   + ++ ++++AGF
Sbjct: 359 VSGLDRAGKIDAAIGTYNEMLRNGCKPNLCTYNALIKLHGVRGKFPEMMIVFDEIRSAGF 418

Query: 532 EPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWE 591
            PD VT++ ++ V G  G   E   VF EM++  +VP+   Y  L+  + + G   +A E
Sbjct: 419 VPDVVTWNTLLAVFGQNGLDTEVSGVFKEMKKSGYVPERDTYVSLISSYSRCGLFDQAME 478

Query: 592 WYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCT 651
            Y+ M++AG+ P++ T N++LSA  R G+   A  L   M NL  +P   +Y+ LL    
Sbjct: 479 IYKRMIEAGIHPDISTYNAVLSALARGGRWEQAEKLFAEMENLDSRPDELSYSSLLHAYA 538

Query: 652 EAR 654
            A+
Sbjct: 539 NAK 541



 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 84/305 (27%), Positives = 152/305 (49%), Gaps = 1/305 (0%)

Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLI 402
           A+G +N + R  G K +  TY  ++ + G   +F  +  + D++   G  P+VVT+N L+
Sbjct: 371 AIGTYNEMLRN-GCKPNLCTYNALIKLHGVRGKFPEMMIVFDEIRSAGFVPDVVTWNTLL 429

Query: 403 HSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLS 462
             +G+     E   VFK+M+  G  P+R TY +LI  +++ G  D AM++YK+M  AG+ 
Sbjct: 430 AVFGQNGLDTEVSGVFKEMKKSGYVPERDTYVSLISSYSRCGLFDQAMEIYKRMIEAGIH 489

Query: 463 PDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKL 522
           PD  TY+ +++ L + G  + A +LF EM N    P+ ++Y+ ++   A A+       L
Sbjct: 490 PDISTYNAVLSALARGGRWEQAEKLFAEMENLDSRPDELSYSSLLHAYANAKKLDKMKSL 549

Query: 523 YRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGK 582
             D+     E        ++ V      L + E  F E+RR+    D  V   ++ ++GK
Sbjct: 550 SEDIYAERIESHNGLVKTLVLVNSKVNNLSDTEKAFLELRRRRCSLDINVLNAMISIYGK 609

Query: 583 AGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQT 642
            G V+K  E    M ++ +  +  T NSL+  + R+G      ++L  + +   +P   +
Sbjct: 610 NGMVKKVEEILSLMKESSINLSTATYNSLMHMYSRLGDCEKCENILTEIKSSRARPDRYS 669

Query: 643 YTLLL 647
           Y  ++
Sbjct: 670 YNTMI 674



 Score =  118 bits (295), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 81/292 (27%), Positives = 127/292 (43%), Gaps = 36/292 (12%)

Query: 393 PNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEP------------------------ 428
           P+   Y  LI +  RA+   +A+ VF++M   G  P                        
Sbjct: 174 PDASAYTALISALSRASRFRDAVAVFRRMVANGVCPALVTYNVVLHVYSKIAVPWKEVLA 233

Query: 429 ------------DRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLG 476
                       DR TY TLI    +      A  ++ +M+AAG  PD  T + +++  G
Sbjct: 234 LVDSMRKDGIPLDRYTYNTLISCCRRRALYKEAAKVFDEMRAAGFEPDKVTLNSLLDVYG 293

Query: 477 KAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKV 536
           KA     A  +  EM   GC P++VTYN +I+   K    + A +L  +M+  G EPD +
Sbjct: 294 KARRYDEAIGVLKEMEQGGCPPSVVTYNSLISSYVKDGLLEEATQLKEEMEVKGIEPDVI 353

Query: 537 TYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAM 596
           TY+ ++  L   G +D A   + EM R    P+   Y  L+ L G  G   +    ++ +
Sbjct: 354 TYTTLVSGLDRAGKIDAAIGTYNEMLRNGCKPNLCTYNALIKLHGVRGKFPEMMIVFDEI 413

Query: 597 LQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
             AG  P+V T N+LL+ F + G  ++   + + M   G  P   TY  L+S
Sbjct: 414 RSAGFVPDVVTWNTLLAVFGQNGLDTEVSGVFKEMKKSGYVPERDTYVSLIS 465



 Score =  112 bits (281), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 66/311 (21%), Positives = 144/311 (46%), Gaps = 2/311 (0%)

Query: 345 GFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHS 404
           G F  +++ +G+  +  TY +++    R   F    ++  +M+  G  P++ TYN ++ +
Sbjct: 443 GVFKEMKK-SGYVPERDTYVSLISSYSRCGLFDQAMEIYKRMIEAGIHPDISTYNAVLSA 501

Query: 405 YGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPD 464
             R     +A  +F +M+ +   PD ++Y +L+  +A A  LD    + + + A  +   
Sbjct: 502 LARGGRWEQAEKLFAEMENLDSRPDELSYSSLLHAYANAKKLDKMKSLSEDIYAERIESH 561

Query: 465 TFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYR 524
                 ++    K  +L    + F E+  + C  ++   N MI++  K    +   ++  
Sbjct: 562 NGLVKTLVLVNSKVNNLSDTEKAFLELRRRRCSLDINVLNAMISIYGKNGMVKKVEEILS 621

Query: 525 DMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAG 584
            M+ +       TY+ +M +    G  ++ E +  E++     PD   Y  ++  +G+ G
Sbjct: 622 LMKESSINLSTATYNSLMHMYSRLGDCEKCENILTEIKSSRARPDRYSYNTMIYAYGRKG 681

Query: 585 NVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTY- 643
            +++A   +  M  +GL P++ T N  + +++      +A  L++ M+  G KP+ +TY 
Sbjct: 682 QMKEASRLFSEMKCSGLVPDIVTYNIFVKSYVANSMFEEAIDLVRYMVTHGCKPNERTYN 741

Query: 644 TLLLSCCTEAR 654
           T+L   C+  R
Sbjct: 742 TILQEYCSHGR 752



 Score =  106 bits (265), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 85/293 (29%), Positives = 137/293 (46%), Gaps = 21/293 (7%)

Query: 463 PDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAK-ARNYQSALK 521
           PD   Y+ +I+ L +A   + A  +F  MV  G  P LVTYN+++ + +K A  ++  L 
Sbjct: 174 PDASAYTALISALSRASRFRDAVAVFRRMVANGVCPALVTYNVVLHVYSKIAVPWKEVLA 233

Query: 522 LYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWG 581
           L   M+  G   D+ TY+ ++          EA  VF EMR   + PD+     L+D++G
Sbjct: 234 LVDSMRKDGIPLDRYTYNTLISCCRRRALYKEAAKVFDEMRAAGFEPDKVTLNSLLDVYG 293

Query: 582 KAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQ 641
           KA    +A    + M Q G  P+V T NSL+S++++ G L +A  L + M   G++P + 
Sbjct: 294 KARRYDEAIGVLKEMEQGGCPPSVVTYNSLISSYVKDGLLEEATQLKEEMEVKGIEPDVI 353

Query: 642 TYTLLLSCCTEA-RSPYDMGFCHELMAVSGHP---AHMFLLSMPSPGPDGQNVRDHVGSF 697
           TYT L+S    A +    +G  +E++     P    +  L+ +         VR   G F
Sbjct: 354 TYTTLVSGLDRAGKIDAAIGTYNEMLRNGCKPNLCTYNALIKL-------HGVR---GKF 403

Query: 698 LEMMHSEDRESKRGLVDAVVDF------LHKSGLKEEAGSVWEVAAQKNVYPD 744
            EMM   D     G V  VV +        ++GL  E   V++   +    P+
Sbjct: 404 PEMMIVFDEIRSAGFVPDVVTWNTLLAVFGQNGLDTEVSGVFKEMKKSGYVPE 456



 Score = 90.5 bits (223), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 58/282 (20%), Positives = 128/282 (45%)

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
           +AG   D  TY  ++  L R  ++    KL  +M     +P+ ++Y+ L+H+Y  A  L+
Sbjct: 485 EAGIHPDISTYNAVLSALARGGRWEQAEKLFAEMENLDSRPDELSYSSLLHAYANAKKLD 544

Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
           +   + + +     E       TL+ +++K   L      + +++    S D    + +I
Sbjct: 545 KMKSLSEDIYAERIESHNGLVKTLVLVNSKVNNLSDTEKAFLELRRRRCSLDINVLNAMI 604

Query: 473 NCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFE 532
           +  GK G ++   ++   M       +  TYN ++ + ++  + +    +  +++++   
Sbjct: 605 SIYGKNGMVKKVEEILSLMKESSINLSTATYNSLMHMYSRLGDCEKCENILTEIKSSRAR 664

Query: 533 PDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEW 592
           PD+ +Y+ ++   G  G + EA  +F+EM+    VPD   Y + V  +       +A + 
Sbjct: 665 PDRYSYNTMIYAYGRKGQMKEASRLFSEMKCSGLVPDIVTYNIFVKSYVANSMFEEAIDL 724

Query: 593 YEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNL 634
              M+  G +PN  T N++L  +   G+++D    +  +  L
Sbjct: 725 VRYMVTHGCKPNERTYNTILQEYCSHGRIADGKSFISNLPEL 766



 Score = 42.4 bits (98), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 46/192 (23%), Positives = 73/192 (38%), Gaps = 25/192 (13%)

Query: 568 PDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVG-QLSDAYH 626
           PD   Y  L+    +A   R A   +  M+  G+ P + T N +L  + ++     +   
Sbjct: 174 PDASAYTALISALSRASRFRDAVAVFRRMVANGVCPALVTYNVVLHVYSKIAVPWKEVLA 233

Query: 627 LLQGMLNLGLKPSLQTYTLLLSCC------TEARSPYDMGFCHELMAVSGHPAHMFLLSM 680
           L+  M   G+     TY  L+SCC       EA   +D     E+ A    P  + L S+
Sbjct: 234 LVDSMRKDGIPLDRYTYNTLISCCRRRALYKEAAKVFD-----EMRAAGFEPDKVTLNSL 288

Query: 681 PSPGPDGQNVRDHVGSFLEMMHSEDRESKRGLVDAVVDF------LHKSGLKEEAGSVWE 734
                  +   + +G   EM        + G   +VV +        K GL EEA  + E
Sbjct: 289 LDVYGKARRYDEAIGVLKEM-------EQGGCPPSVVTYNSLISSYVKDGLLEEATQLKE 341

Query: 735 VAAQKNVYPDAV 746
               K + PD +
Sbjct: 342 EMEVKGIEPDVI 353


>gi|297743996|emb|CBI36966.3| unnamed protein product [Vitis vinifera]
          Length = 730

 Score =  203 bits (517), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 139/516 (26%), Positives = 246/516 (47%), Gaps = 45/516 (8%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           G + D  TY T++  + +  Q     +++ +M R    PNVVTY+ +I  Y +A  L+EA
Sbjct: 207 GIEQDIFTYNTLLDAVCKGGQMDLAFQIMSEMPRKHIMPNVVTYSTVIDGYAKAGRLDEA 266

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
           L++F +M+      DRV+Y TL+ I+AK G  + A+++ K+M+++G+  D  TY+ ++  
Sbjct: 267 LNLFNEMKFASIGLDRVSYNTLLSIYAKLGRFEEALNVCKEMESSGIKKDAVTYNALLGG 326

Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPD 534
            GK G  +   ++F EM  +   PNL+TY+ +I + +K   YQ A++++R+ + AG + D
Sbjct: 327 YGKQGKYEEVKRVFEEMKAERIFPNLLTYSTLIDVYSKGGLYQEAMEVFREFKKAGLKAD 386

Query: 535 KVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYE 594
            V YS +++ L   G ++ A +   EM ++   P+   Y  ++D +G++G V  A E   
Sbjct: 387 VVLYSALIDALCKNGLVESAVSFLDEMTKEGIRPNVVTYNSIIDAFGRSGIVEDATES-- 444

Query: 595 AMLQAGLRPNVPTCNSLLSAFLRVGQLSDA------------------YHLLQGMLNLGL 636
              + G + +    N ++  F   GQL+                      +   M  L +
Sbjct: 445 ---EVGDKED----NQIIKIF---GQLAAEKTCHAKKENRGRQEILCILAVFHKMHELDI 494

Query: 637 KPSLQTYTLLLSCCTEARSPYDMGFCHELMAVSGHP----AHMFLLSMPSPGPDGQNVRD 692
           KP++ T++ +L+ C+   S  D     E + +  +     AH  L+        G NV  
Sbjct: 495 KPNVVTFSAILNACSRCNSFEDASMLLEELRLFDNQVYGVAHGLLMGY------GDNVWV 548

Query: 693 HVGSFLEMMHSEDRESKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAVKEKGMS 752
              S  + +   D  +     +A+ D L   G +  A  V     +++V+     E   S
Sbjct: 549 QAQSLFDEVKQMDSSTASAFYNALTDMLWHFGQRRGAQLVVLEGKRRHVW-----ENMWS 603

Query: 753 YWLINLHVMSDGTAVIALSRTLAWFRKQMLISGVGPSRIDIVTGWGRRSRVTGTSLVRQA 812
              ++LH+MS G A   +   L   R  +      P  + I+TGWG+ S+V G   +R+A
Sbjct: 604 NSCLDLHLMSSGAARAMVHAWLLNIRSIVFEGHELPQLLSILTGWGKHSKVVGDGALRRA 663

Query: 813 VQELLHMFSFPFFTENGNSGCFVGCGEPLNKWLLQS 848
           ++ LL     PF     N G F+  G  +  WL +S
Sbjct: 664 IEALLTGMGAPFRVAKCNLGRFISTGAVVAAWLRES 699



 Score =  105 bits (262), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 81/341 (23%), Positives = 145/341 (42%), Gaps = 65/341 (19%)

Query: 390 GCQPNVVTYNRLIHSYGRANY-LNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDV 448
           G +PN+VTYN +I + G+     N A ++F +                            
Sbjct: 165 GLKPNLVTYNAVIDACGKGGVDFNRAAEIFDE---------------------------- 196

Query: 449 AMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIA 508
            M+++ +M   G+  D FTY+ +++ + K G +  A Q+  EM  +  +PN+VTY+ +I 
Sbjct: 197 -MNLFSEMLYRGIEQDIFTYNTLLDAVCKGGQMDLAFQIMSEMPRKHIMPNVVTYSTVID 255

Query: 509 LQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVP 568
             AKA     AL L+ +M+ A    D+V+Y+ ++ +    G  +EA  V  EM       
Sbjct: 256 GYAKAGRLDEALNLFNEMKFASIGLDRVSYNTLLSIYAKLGRFEEALNVCKEMESSGIKK 315

Query: 569 DEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLL 628
           D   Y  L+  +GK G   +    +E M    + PN+ T ++L+  + + G   +A  + 
Sbjct: 316 DAVTYNALLGGYGKQGKYEEVKRVFEEMKAERIFPNLLTYSTLIDVYSKGGLYQEAMEVF 375

Query: 629 QGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGFCHELMAVSGHPAHMFLLSMPSPGPDGQ 688
           +     GLK  +  Y+ L+              C   +  S   A  FL  M   G    
Sbjct: 376 REFKKAGLKADVVLYSALID-----------ALCKNGLVES---AVSFLDEMTKEG---- 417

Query: 689 NVRDHVGSFLEMMHSEDRESKRGLVDAVVDFLHKSGLKEEA 729
            +R +V ++                ++++D   +SG+ E+A
Sbjct: 418 -IRPNVVTY----------------NSIIDAFGRSGIVEDA 441



 Score = 58.5 bits (140), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 66/297 (22%), Positives = 117/297 (39%), Gaps = 24/297 (8%)

Query: 515 NYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCG--------YLDEAEAVFAEMRRKNW 566
           +Y   L+   +  ++G +P+ VTY+ V++  G  G          DE   +F+EM  +  
Sbjct: 150 DYTFLLRELGNRGDSGLKPNLVTYNAVIDACGKGGVDFNRAAEIFDEMN-LFSEMLYRGI 208

Query: 567 VPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYH 626
             D   Y  L+D   K G +  A++    M +  + PNV T ++++  + + G+L +A +
Sbjct: 209 EQDIFTYNTLLDAVCKGGQMDLAFQIMSEMPRKHIMPNVVTYSTVIDGYAKAGRLDEALN 268

Query: 627 LLQGMLNLGLKPSLQTYTLLLSCCTE-ARSPYDMGFCHELMAVSGHPAHMFLLSMPSPGP 685
           L   M    +     +Y  LLS   +  R    +  C E M  SG        +    G 
Sbjct: 269 LFNEMKFASIGLDRVSYNTLLSIYAKLGRFEEALNVCKE-MESSGIKKDAVTYNALLGGY 327

Query: 686 DGQNVRDHVGSFLEMMHSEDRESKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDA 745
             Q   + V    E M +E           ++D   K GL +EA  V+            
Sbjct: 328 GKQGKYEEVKRVFEEMKAERIFPNLLTYSTLIDVYSKGGLYQEAMEVFR----------E 377

Query: 746 VKEKGMSYWLINLHVMSDGTAVIALSRTLAWFRKQMLISGVGPSRI---DIVTGWGR 799
            K+ G+   ++    + D      L  +   F  +M   G+ P+ +    I+  +GR
Sbjct: 378 FKKAGLKADVVLYSALIDALCKNGLVESAVSFLDEMTKEGIRPNVVTYNSIIDAFGR 434



 Score = 57.0 bits (136), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 53/234 (22%), Positives = 102/234 (43%), Gaps = 36/234 (15%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           ++AG K D   Y+ ++  L +     +    LD+M ++G +PNVVTYN +I ++GR+  +
Sbjct: 379 KKAGLKADVVLYSALIDALCKNGLVESAVSFLDEMTKEGIRPNVVTYNSIIDAFGRSGIV 438

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDI------HAKA---GFLDV--AMDMYKKMQAAG 460
            +A +       VG + D         +      HAK    G  ++   + ++ KM    
Sbjct: 439 EDATE-----SEVGDKEDNQIIKIFGQLAAEKTCHAKKENRGRQEILCILAVFHKMHELD 493

Query: 461 LSPDTFTYSVIINCLGKAGHLQAAHQLFCEM---------VNQGCIPNLVTYNIMIALQA 511
           + P+  T+S I+N   +    + A  L  E+         V  G    L+ Y   + +QA
Sbjct: 494 IKPNVVTFSAILNACSRCNSFEDASMLLEELRLFDNQVYGVAHGL---LMGYGDNVWVQA 550

Query: 512 KARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKN 565
           ++        L+ +++          Y+ + ++L H G    A+ V  E +R++
Sbjct: 551 QS--------LFDEVKQMDSSTASAFYNALTDMLWHFGQRRGAQLVVLEGKRRH 596


>gi|168007580|ref|XP_001756486.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162692525|gb|EDQ78882.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 528

 Score =  203 bits (516), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 105/293 (35%), Positives = 164/293 (55%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           G + DE+TY  +V  LG+A +        D M+  G  PN+ TYN L+ ++ +   L+ A
Sbjct: 130 GSEPDEYTYGFLVNALGKAGRVQEARSFFDAMLERGLTPNIPTYNLLMDAFRKVGQLDMA 189

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
           L +F +M+  G +P  VTY  L+D    AG +  A  ++ KM   G SPD++TYS ++N 
Sbjct: 190 LGLFAEMKRRGFQPSVVTYNILLDALCSAGRVGAARKLFHKMTGDGCSPDSYTYSTLVNG 249

Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPD 534
           LGK+G ++ AH++F EMV++G   +LV YN ++A  AKA N     KL ++M   GF PD
Sbjct: 250 LGKSGRVEEAHKVFREMVDRGVAVDLVNYNSLLATLAKAGNMDRVWKLMKEMSRKGFHPD 309

Query: 535 KVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYE 594
             +++ +M+ LG     D A  VFA M      PD   Y +L+D + + G+  +A +  E
Sbjct: 310 AFSFNTIMDALGKANKPDAAREVFARMVESGCKPDLISYNILIDSYARFGDAAQARQMLE 369

Query: 595 AMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
            M++AG  P   T NSL+      GQ+ +A+ +L+ M   G +P + TY  L+
Sbjct: 370 EMVEAGFIPETKTYNSLIHWLATDGQVDEAFAVLEEMETAGCRPDVVTYNRLM 422



 Score =  176 bits (445), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 116/404 (28%), Positives = 194/404 (48%), Gaps = 18/404 (4%)

Query: 361 HTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQ 420
           H +T ++ IL  + +F     +  ++V+ GCQ +   YN LI  +GR+  L+ A+++F++
Sbjct: 66  HAFTKLIDILVNSGEFERAELVYKKLVQKGCQLDRFAYNVLIRYFGRSGQLDSAMEMFRE 125

Query: 421 MQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGH 480
           M++ G EPD  TY  L++   KAG +  A   +  M   GL+P+  TY+++++   K G 
Sbjct: 126 MKIKGSEPDEYTYGFLVNALGKAGRVQEARSFFDAMLERGLTPNIPTYNLLMDAFRKVGQ 185

Query: 481 LQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSI 540
           L  A  LF EM  +G  P++VTYNI++     A    +A KL+  M   G  PD  TYS 
Sbjct: 186 LDMALGLFAEMKRRGFQPSVVTYNILLDALCSAGRVGAARKLFHKMTGDGCSPDSYTYST 245

Query: 541 VMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAG 600
           ++  LG  G ++EA  VF EM  +    D   Y  L+    KAGN+ + W+  + M + G
Sbjct: 246 LVNGLGKSGRVEEAHKVFREMVDRGVAVDLVNYNSLLATLAKAGNMDRVWKLMKEMSRKG 305

Query: 601 LRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSC------CTEAR 654
             P+  + N+++ A  +  +   A  +   M+  G KP L +Y +L+          +AR
Sbjct: 306 FHPDAFSFNTIMDALGKANKPDAAREVFARMVESGCKPDLISYNILIDSYARFGDAAQAR 365

Query: 655 SPYDMGFCHELMAVSGHPAHMFLLSMPS-PGPDGQNVRDHVGSFLEMMHSEDRESKRGLV 713
                    E++     P      S+      DGQ   D   + LE M +          
Sbjct: 366 Q-----MLEEMVEAGFIPETKTYNSLIHWLATDGQV--DEAFAVLEEMETAGCRPDVVTY 418

Query: 714 DAVVDFLHKSGLKEEAGSVWEVAAQKNVYPD----AVKEKGMSY 753
           + ++D L K G  + A  +++    K V PD    AV+  G+++
Sbjct: 419 NRLMDMLGKRGENQRAARLFQQMKDKGVEPDTLSYAVRIDGLAF 462



 Score =  174 bits (441), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 105/332 (31%), Positives = 169/332 (50%), Gaps = 7/332 (2%)

Query: 322 NYSMDAYQANQVLKQLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINK 381
           N  MDA+      +++    +ALG F  ++R+ GF+    TY  ++  L  A + GA  K
Sbjct: 174 NLLMDAF------RKVGQLDMALGLFAEMKRR-GFQPSVVTYNILLDALCSAGRVGAARK 226

Query: 382 LLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHA 441
           L  +M  DGC P+  TY+ L++  G++  + EA  VF++M   G   D V Y +L+   A
Sbjct: 227 LFHKMTGDGCSPDSYTYSTLVNGLGKSGRVEEAHKVFREMVDRGVAVDLVNYNSLLATLA 286

Query: 442 KAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLV 501
           KAG +D    + K+M   G  PD F+++ I++ LGKA    AA ++F  MV  GC P+L+
Sbjct: 287 KAGNMDRVWKLMKEMSRKGFHPDAFSFNTIMDALGKANKPDAAREVFARMVESGCKPDLI 346

Query: 502 TYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEM 561
           +YNI+I   A+  +   A ++  +M  AGF P+  TY+ ++  L   G +DEA AV  EM
Sbjct: 347 SYNILIDSYARFGDAAQARQMLEEMVEAGFIPETKTYNSLIHWLATDGQVDEAFAVLEEM 406

Query: 562 RRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQL 621
                 PD   Y  L+D+ GK G  ++A   ++ M   G+ P+  +    +       +L
Sbjct: 407 ETAGCRPDVVTYNRLMDMLGKRGENQRAARLFQQMKDKGVEPDTLSYAVRIDGLAFDDRL 466

Query: 622 SDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEA 653
            +A  L + M  +G       Y +L+     A
Sbjct: 467 DEALVLFKDMKAVGCPVDKAMYRILIRAAHRA 498



 Score =  167 bits (422), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 89/296 (30%), Positives = 149/296 (50%)

Query: 361 HTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQ 420
           +T   ++   GR  + G    L +Q     C P V  + +LI     +     A  V+K+
Sbjct: 31  NTLVKLITAYGRGNKSGDAFDLFNQAESFACSPTVHAFTKLIDILVNSGEFERAELVYKK 90

Query: 421 MQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGH 480
           +   GC+ DR  Y  LI    ++G LD AM+M+++M+  G  PD +TY  ++N LGKAG 
Sbjct: 91  LVQKGCQLDRFAYNVLIRYFGRSGQLDSAMEMFREMKIKGSEPDEYTYGFLVNALGKAGR 150

Query: 481 LQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSI 540
           +Q A   F  M+ +G  PN+ TYN+++    K      AL L+ +M+  GF+P  VTY+I
Sbjct: 151 VQEARSFFDAMLERGLTPNIPTYNLLMDAFRKVGQLDMALGLFAEMKRRGFQPSVVTYNI 210

Query: 541 VMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAG 600
           +++ L   G +  A  +F +M      PD   Y  LV+  GK+G V +A + +  M+  G
Sbjct: 211 LLDALCSAGRVGAARKLFHKMTGDGCSPDSYTYSTLVNGLGKSGRVEEAHKVFREMVDRG 270

Query: 601 LRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSP 656
           +  ++   NSLL+   + G +   + L++ M   G  P   ++  ++    +A  P
Sbjct: 271 VAVDLVNYNSLLATLAKAGNMDRVWKLMKEMSRKGFHPDAFSFNTIMDALGKANKP 326



 Score =  149 bits (377), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 86/277 (31%), Positives = 143/277 (51%), Gaps = 4/277 (1%)

Query: 379 INKLLDQMVRDG--CQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTL 436
           +  LL +MV +G   +PN +   +LI +YGR N   +A D+F Q +   C P    +  L
Sbjct: 14  LETLLKEMVAEGRPLRPNTLV--KLITAYGRGNKSGDAFDLFNQAESFACSPTVHAFTKL 71

Query: 437 IDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGC 496
           IDI   +G  + A  +YKK+   G   D F Y+V+I   G++G L +A ++F EM  +G 
Sbjct: 72  IDILVNSGEFERAELVYKKLVQKGCQLDRFAYNVLIRYFGRSGQLDSAMEMFREMKIKGS 131

Query: 497 IPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEA 556
            P+  TY  ++    KA   Q A   +  M   G  P+  TY+++M+     G LD A  
Sbjct: 132 EPDEYTYGFLVNALGKAGRVQEARSFFDAMLERGLTPNIPTYNLLMDAFRKVGQLDMALG 191

Query: 557 VFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFL 616
           +FAEM+R+ + P    Y +L+D    AG V  A + +  M   G  P+  T ++L++   
Sbjct: 192 LFAEMKRRGFQPSVVTYNILLDALCSAGRVGAARKLFHKMTGDGCSPDSYTYSTLVNGLG 251

Query: 617 RVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEA 653
           + G++ +A+ + + M++ G+   L  Y  LL+   +A
Sbjct: 252 KSGRVEEAHKVFREMVDRGVAVDLVNYNSLLATLAKA 288



 Score =  140 bits (353), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 77/257 (29%), Positives = 139/257 (54%), Gaps = 14/257 (5%)

Query: 329 QANQVLKQLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVR 388
           +A++V +++ D  VA+   N              Y +++  L +A     + KL+ +M R
Sbjct: 258 EAHKVFREMVDRGVAVDLVN--------------YNSLLATLAKAGNMDRVWKLMKEMSR 303

Query: 389 DGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDV 448
            G  P+  ++N ++ + G+AN  + A +VF +M   GC+PD ++Y  LID +A+ G    
Sbjct: 304 KGFHPDAFSFNTIMDALGKANKPDAAREVFARMVESGCKPDLISYNILIDSYARFGDAAQ 363

Query: 449 AMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIA 508
           A  M ++M  AG  P+T TY+ +I+ L   G +  A  +  EM   GC P++VTYN ++ 
Sbjct: 364 ARQMLEEMVEAGFIPETKTYNSLIHWLATDGQVDEAFAVLEEMETAGCRPDVVTYNRLMD 423

Query: 509 LQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVP 568
           +  K    Q A +L++ M++ G EPD ++Y++ ++ L     LDEA  +F +M+      
Sbjct: 424 MLGKRGENQRAARLFQQMKDKGVEPDTLSYAVRIDGLAFDDRLDEALVLFKDMKAVGCPV 483

Query: 569 DEPVYGLLVDLWGKAGN 585
           D+ +Y +L+    +AG+
Sbjct: 484 DKAMYRILIRAAHRAGD 500



 Score =  130 bits (328), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 94/316 (29%), Positives = 156/316 (49%), Gaps = 12/316 (3%)

Query: 436 LIDIHAKAGFLDVAMDMYKKMQAAG--LSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVN 493
           ++ + A  G LD    + K+M A G  L P+T     +I   G+      A  LF +  +
Sbjct: 1   MLVVLASWGILDPLETLLKEMVAEGRPLRPNTLVK--LITAYGRGNKSGDAFDLFNQAES 58

Query: 494 QGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDE 553
             C P +  +  +I +   +  ++ A  +Y+ +   G + D+  Y++++   G  G LD 
Sbjct: 59  FACSPTVHAFTKLIDILVNSGEFERAELVYKKLVQKGCQLDRFAYNVLIRYFGRSGQLDS 118

Query: 554 AEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLS 613
           A  +F EM+ K   PDE  YG LV+  GKAG V++A  +++AML+ GL PN+PT N L+ 
Sbjct: 119 AMEMFREMKIKGSEPDEYTYGFLVNALGKAGRVQEARSFFDAMLERGLTPNIPTYNLLMD 178

Query: 614 AFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL-SCCTEARSPYDMGFCHELMAVSGHP 672
           AF +VGQL  A  L   M   G +PS+ TY +LL + C+  R        H++      P
Sbjct: 179 AFRKVGQLDMALGLFAEMKRRGFQPSVVTYNILLDALCSAGRVGAARKLFHKMTGDGCSP 238

Query: 673 -AHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRESKRGLV--DAVVDFLHKSGLKEEA 729
            ++ +   +   G  G+    H   F EM+   DR     LV  ++++  L K+G  +  
Sbjct: 239 DSYTYSTLVNGLGKSGRVEEAH-KVFREMV---DRGVAVDLVNYNSLLATLAKAGNMDRV 294

Query: 730 GSVWEVAAQKNVYPDA 745
             + +  ++K  +PDA
Sbjct: 295 WKLMKEMSRKGFHPDA 310


>gi|224112321|ref|XP_002316152.1| predicted protein [Populus trichocarpa]
 gi|222865192|gb|EEF02323.1| predicted protein [Populus trichocarpa]
          Length = 785

 Score =  202 bits (513), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 126/440 (28%), Positives = 220/440 (50%), Gaps = 3/440 (0%)

Query: 359 DEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVF 418
           D  TY  M+  L ++ +  A  KL  +M     +P++  ++ L+ S G+A  L  ++ V+
Sbjct: 261 DVSTYELMIPSLAKSGRLDAAFKLFQEMKERNFRPSLGIFSSLVDSMGKAGRLETSMKVY 320

Query: 419 KQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKA 478
            +MQ +G  P  + Y +LI+ + KAG LD A+ ++ +M+ AG  P+   Y++II    K+
Sbjct: 321 MEMQGLGLRPSAIMYVSLIESYTKAGKLDAALRLWDEMKIAGFRPNFGLYTLIIESHAKS 380

Query: 479 GHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTY 538
           G L  A  +F +M   G +P   TY+ ++ + A +    +A+KLY  M NAG  P   TY
Sbjct: 381 GKLDIAMSIFRDMEKAGFLPTPSTYSSLLEMHAASGQVDAAMKLYNSMTNAGLRPGLSTY 440

Query: 539 SIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQ 598
           + ++ +L H   +D A  +  EM+   +  D     +L+ ++ K G+V  +  W   M  
Sbjct: 441 TALLTLLAHKKLVDVAAKILLEMKAMGFSVDVSASDVLM-VYIKDGSVDLSLRWLRFMSS 499

Query: 599 AGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYD 658
           +G+R N      L  + ++ G    A  LL+  +N   K  L  YT +L+     +   +
Sbjct: 500 SGIRTNNFIIRQLFESCMKNGLYESAKPLLETYVNSAAKVDLILYTSILAYLVRCQEEQN 559

Query: 659 MGFCHELMAVSGHPAHMFLLSM-PSPGPDGQNVRDHVGSFLEMMHSEDRE-SKRGLVDAV 716
                 +++ + H AH F+  +   P    Q V   V  F + +  E  E + +  V+ +
Sbjct: 560 ERHLMAILSATRHKAHAFMCGLFTGPEQRKQPVLSFVREFFQGIDYELEEGAAKYFVNVL 619

Query: 717 VDFLHKSGLKEEAGSVWEVAAQKNVYPDAVKEKGMSYWLINLHVMSDGTAVIALSRTLAW 776
           +++L   G    A  VW+VA +  ++P A+       W +++  +S G A++A+  TL  
Sbjct: 620 LNYLVLMGQINRARCVWKVAYENKLFPKAIVFDQHIAWSLDVRNLSVGAALVAVVHTLHR 679

Query: 777 FRKQMLISGVGPSRIDIVTG 796
           FRK+ML  GV P RI +VTG
Sbjct: 680 FRKRMLYYGVIPRRIKLVTG 699



 Score =  188 bits (478), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 108/362 (29%), Positives = 177/362 (48%), Gaps = 2/362 (0%)

Query: 295 GNVVESVSRILRQWKWGPLAEEALGNTNYSMDAYQANQVLKQLQDHTVALGFFNWLRRQA 354
            + V  +  ++++WKWGP  E  L    +  +     Q LK + +    L  F W +RQ 
Sbjct: 90  ASAVAKIVEVVKRWKWGPELETQLDKLQFVPNMTHVVQALKIINESDALLSLFKWAKRQT 149

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQ--PNVVTYNRLIHSYGRANYLN 412
            +  ++  Y  +   L ++R F  I  L D+MV D  +       YNR++    +A  L 
Sbjct: 150 WYVPNDECYVMLFDGLNQSRDFDGIQSLFDEMVCDSIKSATQFSAYNRVLKYLAKAEKLE 209

Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
            +   FK++Q  GC+ D  TY  L+ +    G    A ++Y+ M+AA  S D  TY ++I
Sbjct: 210 VSFCCFKKVQDSGCKIDTETYNILMKLFLNKGLPYKAFEIYETMEAAHCSLDVSTYELMI 269

Query: 473 NCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFE 532
             L K+G L AA +LF EM  +   P+L  ++ ++    KA   ++++K+Y +MQ  G  
Sbjct: 270 PSLAKSGRLDAAFKLFQEMKERNFRPSLGIFSSLVDSMGKAGRLETSMKVYMEMQGLGLR 329

Query: 533 PDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEW 592
           P  + Y  ++E     G LD A  ++ EM+   + P+  +Y L+++   K+G +  A   
Sbjct: 330 PSAIMYVSLIESYTKAGKLDAALRLWDEMKIAGFRPNFGLYTLIIESHAKSGKLDIAMSI 389

Query: 593 YEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTE 652
           +  M +AG  P   T +SLL      GQ+  A  L   M N GL+P L TYT LL+    
Sbjct: 390 FRDMEKAGFLPTPSTYSSLLEMHAASGQVDAAMKLYNSMTNAGLRPGLSTYTALLTLLAH 449

Query: 653 AR 654
            +
Sbjct: 450 KK 451


>gi|302143554|emb|CBI22115.3| unnamed protein product [Vitis vinifera]
          Length = 765

 Score =  202 bits (513), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 128/446 (28%), Positives = 223/446 (50%), Gaps = 5/446 (1%)

Query: 354 AGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNE 413
           AG   D  TY  M+  L ++ +  A  KL  +M     +P+ + +  L+ S G+A  L+ 
Sbjct: 226 AGCLLDGSTYELMIPSLAKSGRLDAAFKLFQEMKEKNLRPSFLVFASLVDSMGKAGRLDT 285

Query: 414 ALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIIN 473
           ++ V+ +MQ  G  P    Y +LI+   KAG L+ A+ ++ +M+ AG  P+   Y++++ 
Sbjct: 286 SMKVYMEMQGFGLRPSATMYVSLIESFVKAGKLETALRIWDEMKKAGFRPNYGLYTMVVE 345

Query: 474 CLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEP 533
              K+G L+ A  +F +M   G +P   TY+ ++ + + +    SA+KLY  M NAG  P
Sbjct: 346 SHAKSGKLETAMSVFSDMEKAGFLPTPSTYSCLLEMHSASGQVDSAMKLYNSMTNAGLRP 405

Query: 534 DKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWY 593
              TY+ ++ +L +   +D A  V  EM+   +  D     +L+ ++ K G+V  A  W 
Sbjct: 406 GLSTYTALLTLLANKKLVDVAAKVLLEMKAMGFSVDVSASDVLM-VYIKDGSVDLALRWL 464

Query: 594 EAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEA 653
             M  +G+R N      L  + ++ G    A  LL+  +N   K  L  YT +L+     
Sbjct: 465 RFMGSSGIRTNNFIIRQLFESCMKNGLYESAKPLLETYVNSAAKVDLILYTSILAHLVRC 524

Query: 654 RSPYDMGFCHELMAVSGHPAHMFLLSMPSPGPD--GQNVRDHVGSFLEMMHSEDRE-SKR 710
           +   +      +++ + H AH F+  + + GP+   Q V   V  F + +  E  E + R
Sbjct: 525 QEEQNERHLMLILSATKHKAHTFMCGLFT-GPEQRKQPVLSFVREFFQSVDYELEEGAAR 583

Query: 711 GLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAVKEKGMSYWLINLHVMSDGTAVIAL 770
             V+ ++++L   G    A  VW+VA +  ++P A+       W +++  +S G A++A+
Sbjct: 584 YFVNVLLNYLVLMGQINRARCVWKVAYENKLFPKAIVFDQHIAWSLDVRNLSVGAALVAV 643

Query: 771 SRTLAWFRKQMLISGVGPSRIDIVTG 796
             TL  FRK+ML  GV P RI +VTG
Sbjct: 644 VHTLHRFRKRMLYYGVVPRRIKLVTG 669



 Score =  143 bits (361), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 96/357 (26%), Positives = 159/357 (44%), Gaps = 40/357 (11%)

Query: 298 VESVSRILRQWKWGPLAEEALGNTNYSMDAYQANQVLKQLQDHTVALGFFNWLRRQAGFK 357
           V  +  I+ +W+WGP  E  L   ++  +     Q LK + D   +L             
Sbjct: 105 VAKIVEIVNRWRWGPELETQLDKLHFVPNMSHVIQALKIVTDTDASLN-----------S 153

Query: 358 HDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDV 417
            D +  ++++                +Q+VRD                 +A  L  A   
Sbjct: 154 GDNNGVSSVIAC--------------NQVVRD---------------LAKAEKLEVAFCC 184

Query: 418 FKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGK 477
           FK++Q  GC+ D  TY +LI +    G    A ++Y+ M+AAG   D  TY ++I  L K
Sbjct: 185 FKKVQDSGCKIDTATYNSLITLFLNKGLPYKAFEVYESMEAAGCLLDGSTYELMIPSLAK 244

Query: 478 AGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVT 537
           +G L AA +LF EM  +   P+ + +  ++    KA    +++K+Y +MQ  G  P    
Sbjct: 245 SGRLDAAFKLFQEMKEKNLRPSFLVFASLVDSMGKAGRLDTSMKVYMEMQGFGLRPSATM 304

Query: 538 YSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAML 597
           Y  ++E     G L+ A  ++ EM++  + P+  +Y ++V+   K+G +  A   +  M 
Sbjct: 305 YVSLIESFVKAGKLETALRIWDEMKKAGFRPNYGLYTMVVESHAKSGKLETAMSVFSDME 364

Query: 598 QAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEAR 654
           +AG  P   T + LL      GQ+  A  L   M N GL+P L TYT LL+     +
Sbjct: 365 KAGFLPTPSTYSCLLEMHSASGQVDSAMKLYNSMTNAGLRPGLSTYTALLTLLANKK 421


>gi|356573733|ref|XP_003555011.1| PREDICTED: pentatricopeptide repeat-containing protein At1g79490,
           mitochondrial-like [Glycine max]
          Length = 752

 Score =  201 bits (512), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 129/447 (28%), Positives = 225/447 (50%), Gaps = 5/447 (1%)

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
           +AG   D  TY  M+  L ++ +  A  KL  +M   G +P +  +  L+ S G+A  L+
Sbjct: 222 KAGCSLDGSTYELMIPNLAKSGRLDAAFKLFQEMKVRGFRPGLNVFASLVDSMGKAGRLD 281

Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
            A+ V+ +M+  G +P    Y +LI+ + K+G L+ A+ ++ +M+ AG  P+   Y++II
Sbjct: 282 SAMKVYMEMRGYGYKPPPTIYVSLIESYVKSGKLETALRLWDEMRMAGFRPNFGLYTLII 341

Query: 473 NCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFE 532
               K+G L+ A   F +M   G +P   TY  ++ + A +     A+KLY  M NAG  
Sbjct: 342 ESHAKSGKLEIAMSTFLDMEKAGFLPTPSTYACLLEMHAASGQIDPAMKLYNSMTNAGLR 401

Query: 533 PDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEW 592
           P   TY++++ +L +   +D A  +  EM+   +  D     +L+ ++ K G+V  A  W
Sbjct: 402 PGLSTYTVLLTLLANKKLVDVAAKILLEMKAMGYSVDVTASDILM-VYIKEGSVDLALRW 460

Query: 593 YEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTE 652
              M  +G+R N      L  + ++ G    A  LL+  +N   K  L  YT +L+    
Sbjct: 461 LRFMGSSGIRTNNFIIRQLFESCMKSGLFESAKPLLETYVNSAAKVDLILYTSILAHLVR 520

Query: 653 ARSPYDMGFCHELMAVSGHPAHMFLLSMPSPGPD--GQNVRDHVGSFLEMMHSEDRE-SK 709
            +   +      +++ + H AH F+  + + GP+  GQ V   V  F + +  E  E + 
Sbjct: 521 CQEEKNERHLMSILSATKHKAHSFMCGLFT-GPEHRGQPVLTFVREFFQGIDYELEEGAA 579

Query: 710 RGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAVKEKGMSYWLINLHVMSDGTAVIA 769
           +  V+ ++++L   G    A  VW+VA +  ++P A+       W +++  +S G A+IA
Sbjct: 580 KYFVNVLLNYLVLMGQINRARCVWKVAYENKLFPKAIVFDQHIAWSLDVRNLSVGAALIA 639

Query: 770 LSRTLAWFRKQMLISGVGPSRIDIVTG 796
           +  TL  FRK+ML  G+ P RI +VTG
Sbjct: 640 VVHTLHRFRKRMLYYGIVPRRIKLVTG 666



 Score =  180 bits (456), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 111/353 (31%), Positives = 170/353 (48%), Gaps = 2/353 (0%)

Query: 298 VESVSRILRQWKWGPLAEEALGNTNYSMDAYQANQVLKQLQDHTVALGFFNWLRRQAGFK 357
           V  +  ++++WKWGP  +  L    +  +     Q LK + D    L  F W +RQA + 
Sbjct: 60  VAKIVEVVKRWKWGPELDTQLDKLQFVPNMTHIAQALKVVGDVDACLSLFRWAKRQAWYV 119

Query: 358 HDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQ--PNVVTYNRLIHSYGRANYLNEAL 415
             +  Y  +   L + R F  I  L D+MV D           NR+I    +A  L  + 
Sbjct: 120 PSDDCYVMLFDGLNQKRDFEGIQLLFDEMVGDSADGVSLFAACNRVIRYLAKAEKLEVSF 179

Query: 416 DVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCL 475
             FK++   GC+ D  TY +LI +    G    A +MY+ M+ AG S D  TY ++I  L
Sbjct: 180 CCFKKILNAGCKVDTETYNSLITLFLNKGLPYKAFEMYESMEKAGCSLDGSTYELMIPNL 239

Query: 476 GKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDK 535
            K+G L AA +LF EM  +G  P L  +  ++    KA    SA+K+Y +M+  G++P  
Sbjct: 240 AKSGRLDAAFKLFQEMKVRGFRPGLNVFASLVDSMGKAGRLDSAMKVYMEMRGYGYKPPP 299

Query: 536 VTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEA 595
             Y  ++E     G L+ A  ++ EMR   + P+  +Y L+++   K+G +  A   +  
Sbjct: 300 TIYVSLIESYVKSGKLETALRLWDEMRMAGFRPNFGLYTLIIESHAKSGKLEIAMSTFLD 359

Query: 596 MLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
           M +AG  P   T   LL      GQ+  A  L   M N GL+P L TYT+LL+
Sbjct: 360 MEKAGFLPTPSTYACLLEMHAASGQIDPAMKLYNSMTNAGLRPGLSTYTVLLT 412



 Score = 40.8 bits (94), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 45/214 (21%), Positives = 80/214 (37%), Gaps = 38/214 (17%)

Query: 443 AGFLDVAMDMYK-KMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGC--IPN 499
            G +D  + +++   + A   P    Y ++ + L +    +    LF EMV      +  
Sbjct: 99  VGDVDACLSLFRWAKRQAWYVPSDDCYVMLFDGLNQKRDFEGIQLLFDEMVGDSADGVSL 158

Query: 500 LVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFA 559
               N +I   AKA   + +   ++ + NAG + D  TY+                    
Sbjct: 159 FAACNRVIRYLAKAEKLEVSFCCFKKILNAGCKVDTETYNS------------------- 199

Query: 560 EMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVG 619
                           L+ L+   G   KA+E YE+M +AG   +  T   ++    + G
Sbjct: 200 ----------------LITLFLNKGLPYKAFEMYESMEKAGCSLDGSTYELMIPNLAKSG 243

Query: 620 QLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEA 653
           +L  A+ L Q M   G +P L  +  L+    +A
Sbjct: 244 RLDAAFKLFQEMKVRGFRPGLNVFASLVDSMGKA 277


>gi|242046162|ref|XP_002460952.1| hypothetical protein SORBIDRAFT_02g038080 [Sorghum bicolor]
 gi|241924329|gb|EER97473.1| hypothetical protein SORBIDRAFT_02g038080 [Sorghum bicolor]
          Length = 796

 Score =  201 bits (511), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 99/303 (32%), Positives = 169/303 (55%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           ++ G + D +TY T++    R   +    ++ D+M   G +P+ VT+N L+  YG+A   
Sbjct: 248 KEDGIELDRYTYNTLISCCRRRGLYREAAQMFDEMKAAGFEPDKVTFNSLLDVYGKARRH 307

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
            EA+ V K+M+  GC P  VTY +LI  + K G L+ A+++ ++M+  G+ PD  TY+ +
Sbjct: 308 EEAIGVLKKMENAGCTPSVVTYNSLISAYVKDGLLEEALELKQEMEFRGMKPDVVTYTTL 367

Query: 472 INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF 531
           I+ L + G + AA   + EMV  GC PNL TYN +I +      +   + ++ D+++AG+
Sbjct: 368 ISGLDRIGKIDAALATYSEMVRNGCSPNLCTYNALIKMHGVRGKFTEMMIVFDDLRSAGY 427

Query: 532 EPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWE 591
            PD VT++ ++ V G  G   E   VF EM++  ++P+   Y  L+  + + G   +A E
Sbjct: 428 VPDVVTWNTLLAVFGQNGLDSEVSGVFKEMKKAGYIPERDTYVSLISSYSRCGLFDQAME 487

Query: 592 WYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCT 651
            Y+ M++AG+ P++ T N++LSA  R G+   A  L   M +   KP   +Y+ LL    
Sbjct: 488 IYKRMIEAGIYPDISTYNAVLSALARGGRWVQAEKLFAEMEDRDCKPDELSYSSLLHAYA 547

Query: 652 EAR 654
            A+
Sbjct: 548 NAK 550



 Score =  157 bits (398), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 95/291 (32%), Positives = 150/291 (51%), Gaps = 1/291 (0%)

Query: 359 DEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANY-LNEALDV 417
           D   YT +V    RA +F     +  +MV  G QP +VTYN ++H Y + +    E + +
Sbjct: 184 DASAYTALVSEFSRAGRFRDAVAVFRRMVDGGVQPALVTYNVVLHVYSKMSVPWKEVVVL 243

Query: 418 FKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGK 477
              M+  G E DR TY TLI    + G    A  M+ +M+AAG  PD  T++ +++  GK
Sbjct: 244 VDSMKEDGIELDRYTYNTLISCCRRRGLYREAAQMFDEMKAAGFEPDKVTFNSLLDVYGK 303

Query: 478 AGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVT 537
           A   + A  +  +M N GC P++VTYN +I+   K    + AL+L ++M+  G +PD VT
Sbjct: 304 ARRHEEAIGVLKKMENAGCTPSVVTYNSLISAYVKDGLLEEALELKQEMEFRGMKPDVVT 363

Query: 538 YSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAML 597
           Y+ ++  L   G +D A A ++EM R    P+   Y  L+ + G  G   +    ++ + 
Sbjct: 364 YTTLISGLDRIGKIDAALATYSEMVRNGCSPNLCTYNALIKMHGVRGKFTEMMIVFDDLR 423

Query: 598 QAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
            AG  P+V T N+LL+ F + G  S+   + + M   G  P   TY  L+S
Sbjct: 424 SAGYVPDVVTWNTLLAVFGQNGLDSEVSGVFKEMKKAGYIPERDTYVSLIS 474



 Score =  146 bits (368), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 93/328 (28%), Positives = 151/328 (46%), Gaps = 35/328 (10%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYG-------- 406
           G K D  TYTT++  L R  +  A      +MVR+GC PN+ TYN LI  +G        
Sbjct: 356 GMKPDVVTYTTLISGLDRIGKIDAALATYSEMVRNGCSPNLCTYNALIKMHGVRGKFTEM 415

Query: 407 --------RANYL-------------------NEALDVFKQMQVVGCEPDRVTYCTLIDI 439
                    A Y+                   +E   VFK+M+  G  P+R TY +LI  
Sbjct: 416 MIVFDDLRSAGYVPDVVTWNTLLAVFGQNGLDSEVSGVFKEMKKAGYIPERDTYVSLISS 475

Query: 440 HAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPN 499
           +++ G  D AM++YK+M  AG+ PD  TY+ +++ L + G    A +LF EM ++ C P+
Sbjct: 476 YSRCGLFDQAMEIYKRMIEAGIYPDISTYNAVLSALARGGRWVQAEKLFAEMEDRDCKPD 535

Query: 500 LVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFA 559
            ++Y+ ++   A A+       L  D+     EP       ++ V      L E E  F 
Sbjct: 536 ELSYSSLLHAYANAKKLDKMKALSEDIYAQRIEPHNWLVKTLVLVNNKVNSLSETEKAFQ 595

Query: 560 EMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVG 619
           E+RR+    D  V   +V ++GK   V+K  E    M +  +  +  T NSL+  + R+G
Sbjct: 596 ELRRRRCSLDINVLNAMVSIYGKNKMVKKVEEVLTLMKENSINHSAATYNSLMHMYSRLG 655

Query: 620 QLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
                  +L  + + G++P   +Y  ++
Sbjct: 656 DCEKCEAILTEIKSSGMRPDRYSYNTVI 683



 Score =  124 bits (311), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 96/377 (25%), Positives = 168/377 (44%), Gaps = 40/377 (10%)

Query: 294 TGNVVESV-SRILRQWKWGPLAEEALGNTNYSMDAYQANQVL---KQLQDHTVALGFFNW 349
           T NVV  V S++   WK   +  +++      +D Y  N ++   ++   +  A   F+ 
Sbjct: 222 TYNVVLHVYSKMSVPWKEVVVLVDSMKEDGIELDRYTYNTLISCCRRRGLYREAAQMFDE 281

Query: 350 LRRQAGFKHDEHTYTTMVGILGRARQ----FGAI---------------NKLLDQMVRDG 390
           ++  AGF+ D+ T+ +++ + G+AR+     G +               N L+   V+DG
Sbjct: 282 MK-AAGFEPDKVTFNSLLDVYGKARRHEEAIGVLKKMENAGCTPSVVTYNSLISAYVKDG 340

Query: 391 C----------------QPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYC 434
                            +P+VVTY  LI    R   ++ AL  + +M   GC P+  TY 
Sbjct: 341 LLEEALELKQEMEFRGMKPDVVTYTTLISGLDRIGKIDAALATYSEMVRNGCSPNLCTYN 400

Query: 435 TLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQ 494
            LI +H   G     M ++  +++AG  PD  T++ ++   G+ G       +F EM   
Sbjct: 401 ALIKMHGVRGKFTEMMIVFDDLRSAGYVPDVVTWNTLLAVFGQNGLDSEVSGVFKEMKKA 460

Query: 495 GCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEA 554
           G IP   TY  +I+  ++   +  A+++Y+ M  AG  PD  TY+ V+  L   G   +A
Sbjct: 461 GYIPERDTYVSLISSYSRCGLFDQAMEIYKRMIEAGIYPDISTYNAVLSALARGGRWVQA 520

Query: 555 EAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSA 614
           E +FAEM  ++  PDE  Y  L+  +  A  + K     E +    + P+     +L+  
Sbjct: 521 EKLFAEMEDRDCKPDELSYSSLLHAYANAKKLDKMKALSEDIYAQRIEPHNWLVKTLVLV 580

Query: 615 FLRVGQLSDAYHLLQGM 631
             +V  LS+     Q +
Sbjct: 581 NNKVNSLSETEKAFQEL 597



 Score =  116 bits (290), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 75/357 (21%), Positives = 160/357 (44%), Gaps = 17/357 (4%)

Query: 345 GFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHS 404
           G F  +++ AG+  +  TY +++    R   F    ++  +M+  G  P++ TYN ++ +
Sbjct: 452 GVFKEMKK-AGYIPERDTYVSLISSYSRCGLFDQAMEIYKRMIEAGIYPDISTYNAVLSA 510

Query: 405 YGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPD 464
             R     +A  +F +M+   C+PD ++Y +L+  +A A  LD    + + + A  + P 
Sbjct: 511 LARGGRWVQAEKLFAEMEDRDCKPDELSYSSLLHAYANAKKLDKMKALSEDIYAQRIEPH 570

Query: 465 TFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYR 524
            +    ++    K   L    + F E+  + C  ++   N M+++  K +  +   ++  
Sbjct: 571 NWLVKTLVLVNNKVNSLSETEKAFQELRRRRCSLDINVLNAMVSIYGKNKMVKKVEEVLT 630

Query: 525 DMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAG 584
            M+         TY+ +M +    G  ++ EA+  E++     PD   Y  ++  +G+ G
Sbjct: 631 LMKENSINHSAATYNSLMHMYSRLGDCEKCEAILTEIKSSGMRPDRYSYNTVIYAYGRKG 690

Query: 585 NVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYT 644
            +++A   +  M  +G++P++ T N  + +++      +A  L++ ++  G KP+ +TY 
Sbjct: 691 QMKEASRLFSEMKCSGVKPDIVTYNIFIKSYVANLMFEEAIDLVRYLVAQGCKPNERTYN 750

Query: 645 LLLSCCTEARSPYDMGFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMM 701
            +L            G+C     V    A  FL ++P   P       H    LE++
Sbjct: 751 SILE-----------GYCRHGRMVE---AKSFLSNLPKIYPGISKEEKH--RLLELL 791



 Score =  109 bits (273), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 63/188 (33%), Positives = 105/188 (55%), Gaps = 1/188 (0%)

Query: 462 SPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAK-ARNYQSAL 520
           +PD   Y+ +++   +AG  + A  +F  MV+ G  P LVTYN+++ + +K +  ++  +
Sbjct: 182 APDASAYTALVSEFSRAGRFRDAVAVFRRMVDGGVQPALVTYNVVLHVYSKMSVPWKEVV 241

Query: 521 KLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLW 580
            L   M+  G E D+ TY+ ++      G   EA  +F EM+   + PD+  +  L+D++
Sbjct: 242 VLVDSMKEDGIELDRYTYNTLISCCRRRGLYREAAQMFDEMKAAGFEPDKVTFNSLLDVY 301

Query: 581 GKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSL 640
           GKA    +A    + M  AG  P+V T NSL+SA+++ G L +A  L Q M   G+KP +
Sbjct: 302 GKARRHEEAIGVLKKMENAGCTPSVVTYNSLISAYVKDGLLEEALELKQEMEFRGMKPDV 361

Query: 641 QTYTLLLS 648
            TYT L+S
Sbjct: 362 VTYTTLIS 369



 Score = 69.7 bits (169), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 39/170 (22%), Positives = 79/170 (46%), Gaps = 7/170 (4%)

Query: 322 NYSMDAYQANQVLKQLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINK 381
           N  +  Y  N+++K++++          L ++    H   TY +++ +  R         
Sbjct: 610 NAMVSIYGKNKMVKKVEEVLT-------LMKENSINHSAATYNSLMHMYSRLGDCEKCEA 662

Query: 382 LLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHA 441
           +L ++   G +P+  +YN +I++YGR   + EA  +F +M+  G +PD VTY   I  + 
Sbjct: 663 ILTEIKSSGMRPDRYSYNTVIYAYGRKGQMKEASRLFSEMKCSGVKPDIVTYNIFIKSYV 722

Query: 442 KAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEM 491
                + A+D+ + + A G  P+  TY+ I+    + G +  A      +
Sbjct: 723 ANLMFEEAIDLVRYLVAQGCKPNERTYNSILEGYCRHGRMVEAKSFLSNL 772



 Score = 42.0 bits (97), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 24/84 (28%), Positives = 40/84 (47%), Gaps = 1/84 (1%)

Query: 568 PDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVG-QLSDAYH 626
           PD   Y  LV  + +AG  R A   +  M+  G++P + T N +L  + ++     +   
Sbjct: 183 PDASAYTALVSEFSRAGRFRDAVAVFRRMVDGGVQPALVTYNVVLHVYSKMSVPWKEVVV 242

Query: 627 LLQGMLNLGLKPSLQTYTLLLSCC 650
           L+  M   G++    TY  L+SCC
Sbjct: 243 LVDSMKEDGIELDRYTYNTLISCC 266


>gi|168059281|ref|XP_001781632.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162666946|gb|EDQ53588.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 871

 Score =  201 bits (510), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 177/691 (25%), Positives = 285/691 (41%), Gaps = 129/691 (18%)

Query: 283 GLAPFSRHFASTGNVVESVSRILRQWKWGPLAEEALGNTNYSMDAYQANQVLKQLQDHTV 342
           GL  F       GN  E   R L+ ++W  + ++    + +S  A      L +L    +
Sbjct: 162 GLEDFPYLLRELGNRGEW-ERALQGYEW--MVQQVHLRSEWSKLASIMISTLGRLGKVEI 218

Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLI 402
           AL  FN   ++AGF ++ + Y+ MV   GR+ +     K+   M + GC+PN++TYN +I
Sbjct: 219 ALDVFN-RAQKAGFGNNVYAYSAMVSAYGRSGRCREALKVFQAMKKAGCKPNLITYNTII 277

Query: 403 HSYGRANY-LNEALDVFKQMQVVGCEPDRVTY------C--------------------- 434
            + G+    L +ALD+F +MQ  G EPDR+T+      C                     
Sbjct: 278 DACGKGGVDLKQALDIFDEMQKEGVEPDRITFNSLIAVCSRGGLWEDSQRVFAEMQRRGI 337

Query: 435 --------TLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQ 486
                   TLID   K G +++A  +   M+   +SP+  TYS +I+  GK G  + A  
Sbjct: 338 EQDIFTFNTLIDAVCKGGQMELAASIMTTMRGKNISPNVVTYSTMIDGYGKLGCFEEAIS 397

Query: 487 LFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLG 546
           L+ +M   G  P+ V+YN +I + AK   +  AL   +DM+  G + D VTY+ +++  G
Sbjct: 398 LYHDMKESGVRPDRVSYNTLIDIYAKLGRFDDALIACKDMERVGLKADVVTYNALIDAYG 457

Query: 547 HCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGN--------------------- 585
             G   +A  +F +M+ +  VP+   Y  L+D + KAG                      
Sbjct: 458 KQGKYKDAACLFDKMKGEGLVPNVLTYSALIDSYSKAGMHQDVSNVFTEFKRAGLKPDVV 517

Query: 586 --------------VRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSD-------- 623
                         V  A    + M QAG++PN+ T NSL+ A+ R GQ           
Sbjct: 518 LYSSLIDSCCKCGLVEDAVVLLQEMTQAGIQPNIVTYNSLIDAYGRYGQADKLEAVKANM 577

Query: 624 ---------------------------------AYHLLQGMLNLGLKPSLQTYTLLLSCC 650
                                            A  +   M   GLKP++ T++ +L+ C
Sbjct: 578 PNSVQKIGERSMEVVRKPPPSQQNASDHTGVLAAVSVFHEMQQFGLKPNVVTFSAILNAC 637

Query: 651 TEARSPYDMGFCHELMA-----VSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSED 705
           +   S  +     E M      V G  AH  L+ +       + V        + +   D
Sbjct: 638 SRCASLQEASVLLEQMRFFDGWVYG-IAHGLLMGLR------EQVWVEAQRLFDEISRMD 690

Query: 706 RESKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAVKEKGMSYWLINLHVMSDGT 765
             +     +A+ D L   G ++ A  V   A ++ V+ +A       + L +LH+MS G 
Sbjct: 691 YATGAAFYNALTDVLWHFGQRQGAQEVVVAAKRRQVWENAWWRSEQQFCL-DLHLMSVGA 749

Query: 766 AVIALSRTLAWFRKQMLISGVGPSRIDIVTGWGRRSRVTGTSLVRQAVQELLHMFSFPFF 825
           A   L   L   R  +      P  + I+TGWG+ S+V G S V++AV+  L     PF 
Sbjct: 750 AQAMLHVWLLDLRALVWDGHALPRVLSILTGWGKHSKVAGVSTVKRAVELRLQEIKAPFQ 809

Query: 826 TENGNSGCFVGCGEPLNKWLLQSYVDRMHLL 856
               N G  V  G  + +WL      ++ +L
Sbjct: 810 VGRYNEGRLVCAGHIVREWLGDPRTSKLLML 840


>gi|125559009|gb|EAZ04545.1| hypothetical protein OsI_26694 [Oryza sativa Indica Group]
          Length = 784

 Score =  199 bits (507), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 100/303 (33%), Positives = 169/303 (55%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           ++ G   D +TY T++    R   +    ++ D+M   G +P+ VT+N L+  YG+A   
Sbjct: 235 KEHGVAPDRYTYNTLISCCRRRALYKEAAQVFDEMKASGFEPDKVTFNSLLDVYGKARRH 294

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
           +EA++V ++M+ VGC P  VTY +LI  + K G L+ A+ + ++M+  G+ PD  TY+ +
Sbjct: 295 DEAIEVIQEMERVGCPPSVVTYNSLISSYVKDGLLEQAVALKQEMEVKGIKPDVVTYTTL 354

Query: 472 INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF 531
           I+ L +AG + AA   + EMV  GC PNL TYN +I +      +   + ++ ++++AGF
Sbjct: 355 ISGLDRAGKIDAAIVEYDEMVRNGCKPNLCTYNALIKMHGVRGKFPEMMAVFDELRSAGF 414

Query: 532 EPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWE 591
            PD VT++ ++ V G  G   E   VF EM++  ++P+   Y  L+  + + G    A +
Sbjct: 415 VPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKKAGYIPERDTYVSLISSYSRCGLFDLAMQ 474

Query: 592 WYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCT 651
            Y+ M++AG+ P+V T N++LSA  R G+   A  L   M     KP   +Y+ LL    
Sbjct: 475 IYKRMMEAGIYPDVSTYNAVLSALARGGRWEQAEKLFAEMEERDCKPDEYSYSSLLHAYA 534

Query: 652 EAR 654
            A+
Sbjct: 535 NAK 537



 Score =  152 bits (383), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 96/328 (29%), Positives = 156/328 (47%), Gaps = 35/328 (10%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYG-------- 406
           G K D  TYTT++  L RA +  A     D+MVR+GC+PN+ TYN LI  +G        
Sbjct: 343 GIKPDVVTYTTLISGLDRAGKIDAAIVEYDEMVRNGCKPNLCTYNALIKMHGVRGKFPEM 402

Query: 407 ----------------------RANYLNEALD-----VFKQMQVVGCEPDRVTYCTLIDI 439
                                  A +    LD     VFK+M+  G  P+R TY +LI  
Sbjct: 403 MAVFDELRSAGFVPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKKAGYIPERDTYVSLISS 462

Query: 440 HAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPN 499
           +++ G  D+AM +YK+M  AG+ PD  TY+ +++ L + G  + A +LF EM  + C P+
Sbjct: 463 YSRCGLFDLAMQIYKRMMEAGIYPDVSTYNAVLSALARGGRWEQAEKLFAEMEERDCKPD 522

Query: 500 LVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFA 559
             +Y+ ++   A A+       L  D+ +   EP       ++ V      L EAE  F 
Sbjct: 523 EYSYSSLLHAYANAKRLDKMKALSDDIYSERIEPHNWLVKTLVLVNSKVNNLAEAEKAFL 582

Query: 560 EMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVG 619
           E+R+K    D  V   +V ++GK   VRK  +    M ++ +  +  T NSL+  + R+G
Sbjct: 583 ELRQKRCSLDINVLNAMVSIYGKNRMVRKVEKILSLMKESAINLSAATYNSLMHMYSRLG 642

Query: 620 QLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
                 ++L  + + G++P   +Y  ++
Sbjct: 643 DCEKCENILTEIKSSGVRPDRYSYNTVI 670



 Score =  125 bits (314), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 78/308 (25%), Positives = 143/308 (46%), Gaps = 35/308 (11%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGC-------------------- 391
           + +GF+ D+ T+ +++ + G+AR+     +++ +M R GC                    
Sbjct: 270 KASGFEPDKVTFNSLLDVYGKARRHDEAIEVIQEMERVGCPPSVVTYNSLISSYVKDGLL 329

Query: 392 ---------------QPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTL 436
                          +P+VVTY  LI    RA  ++ A+  + +M   GC+P+  TY  L
Sbjct: 330 EQAVALKQEMEVKGIKPDVVTYTTLISGLDRAGKIDAAIVEYDEMVRNGCKPNLCTYNAL 389

Query: 437 IDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGC 496
           I +H   G     M ++ ++++AG  PD  T++ ++   G+ G       +F EM   G 
Sbjct: 390 IKMHGVRGKFPEMMAVFDELRSAGFVPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKKAGY 449

Query: 497 IPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEA 556
           IP   TY  +I+  ++   +  A+++Y+ M  AG  PD  TY+ V+  L   G  ++AE 
Sbjct: 450 IPERDTYVSLISSYSRCGLFDLAMQIYKRMMEAGIYPDVSTYNAVLSALARGGRWEQAEK 509

Query: 557 VFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFL 616
           +FAEM  ++  PDE  Y  L+  +  A  + K     + +    + P+     +L+    
Sbjct: 510 LFAEMEERDCKPDEYSYSSLLHAYANAKRLDKMKALSDDIYSERIEPHNWLVKTLVLVNS 569

Query: 617 RVGQLSDA 624
           +V  L++A
Sbjct: 570 KVNNLAEA 577



 Score =  121 bits (304), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 68/299 (22%), Positives = 142/299 (47%), Gaps = 1/299 (0%)

Query: 345 GFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHS 404
           G F  +++ AG+  +  TY +++    R   F    ++  +M+  G  P+V TYN ++ +
Sbjct: 439 GVFKEMKK-AGYIPERDTYVSLISSYSRCGLFDLAMQIYKRMMEAGIYPDVSTYNAVLSA 497

Query: 405 YGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPD 464
             R     +A  +F +M+   C+PD  +Y +L+  +A A  LD    +   + +  + P 
Sbjct: 498 LARGGRWEQAEKLFAEMEERDCKPDEYSYSSLLHAYANAKRLDKMKALSDDIYSERIEPH 557

Query: 465 TFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYR 524
            +    ++    K  +L  A + F E+  + C  ++   N M+++  K R  +   K+  
Sbjct: 558 NWLVKTLVLVNSKVNNLAEAEKAFLELRQKRCSLDINVLNAMVSIYGKNRMVRKVEKILS 617

Query: 525 DMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAG 584
            M+ +       TY+ +M +    G  ++ E +  E++     PD   Y  ++  +G+ G
Sbjct: 618 LMKESAINLSAATYNSLMHMYSRLGDCEKCENILTEIKSSGVRPDRYSYNTVIYAYGRKG 677

Query: 585 NVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTY 643
            +++A   +  M  +GL+P+V T N  + +++      +A  L++ M+  G KP+ +TY
Sbjct: 678 QMKEASRLFSEMKCSGLKPDVVTYNIFVKSYVSNSMFEEAIELVRYMVTQGCKPNERTY 736



 Score =  114 bits (285), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 70/215 (32%), Positives = 115/215 (53%), Gaps = 5/215 (2%)

Query: 435 TLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQ 494
           T I + A+AG L  A      +  A   PD   Y+ +++   +AG  + A  +F  MV+ 
Sbjct: 146 TAIRVMARAGRLAEA----SALLDAAPGPDAGAYTALVSAFSRAGRFRDAVAVFRRMVDS 201

Query: 495 GCIPNLVTYNIMIALQAK-ARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDE 553
           G  P +VTYN+++ + +K A  ++  ++L   M+  G  PD+ TY+ ++          E
Sbjct: 202 GVQPAIVTYNVVLHVYSKMAVPWKEVVELVASMKEHGVAPDRYTYNTLISCCRRRALYKE 261

Query: 554 AEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLS 613
           A  VF EM+   + PD+  +  L+D++GKA    +A E  + M + G  P+V T NSL+S
Sbjct: 262 AAQVFDEMKASGFEPDKVTFNSLLDVYGKARRHDEAIEVIQEMERVGCPPSVVTYNSLIS 321

Query: 614 AFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
           ++++ G L  A  L Q M   G+KP + TYT L+S
Sbjct: 322 SYVKDGLLEQAVALKQEMEVKGIKPDVVTYTTLIS 356



 Score =  102 bits (255), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 63/272 (23%), Positives = 127/272 (46%)

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
           +AG   D  TY  ++  L R  ++    KL  +M    C+P+  +Y+ L+H+Y  A  L+
Sbjct: 481 EAGIYPDVSTYNAVLSALARGGRWEQAEKLFAEMEERDCKPDEYSYSSLLHAYANAKRLD 540

Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
           +   +   +     EP      TL+ +++K   L  A   + +++    S D    + ++
Sbjct: 541 KMKALSDDIYSERIEPHNWLVKTLVLVNSKVNNLAEAEKAFLELRQKRCSLDINVLNAMV 600

Query: 473 NCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFE 532
           +  GK   ++   ++   M       +  TYN ++ + ++  + +    +  +++++G  
Sbjct: 601 SIYGKNRMVRKVEKILSLMKESAINLSAATYNSLMHMYSRLGDCEKCENILTEIKSSGVR 660

Query: 533 PDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEW 592
           PD+ +Y+ V+   G  G + EA  +F+EM+     PD   Y + V  +       +A E 
Sbjct: 661 PDRYSYNTVIYAYGRKGQMKEASRLFSEMKCSGLKPDVVTYNIFVKSYVSNSMFEEAIEL 720

Query: 593 YEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDA 624
              M+  G +PN  T NS++  + R G+L+DA
Sbjct: 721 VRYMVTQGCKPNERTYNSIVEGYCRNGKLTDA 752



 Score = 84.0 bits (206), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 45/193 (23%), Positives = 99/193 (51%), Gaps = 4/193 (2%)

Query: 365 TMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVV 424
           T+V +  +        K   ++ +  C  ++   N ++  YG+   + +   +   M+  
Sbjct: 563 TLVLVNSKVNNLAEAEKAFLELRQKRCSLDINVLNAMVSIYGKNRMVRKVEKILSLMKES 622

Query: 425 GCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAA 484
                  TY +L+ ++++ G  +   ++  +++++G+ PD ++Y+ +I   G+ G ++ A
Sbjct: 623 AINLSAATYNSLMHMYSRLGDCEKCENILTEIKSSGVRPDRYSYNTVIYAYGRKGQMKEA 682

Query: 485 HQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEV 544
            +LF EM   G  P++VTYNI +        ++ A++L R M   G +P++ TY+ ++E 
Sbjct: 683 SRLFSEMKCSGLKPDVVTYNIFVKSYVSNSMFEEAIELVRYMVTQGCKPNERTYNSIVE- 741

Query: 545 LGHC--GYLDEAE 555
            G+C  G L +A+
Sbjct: 742 -GYCRNGKLTDAK 753



 Score = 65.1 bits (157), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 33/135 (24%), Positives = 65/135 (48%)

Query: 350 LRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRAN 409
           L +++       TY +++ +  R         +L ++   G +P+  +YN +I++YGR  
Sbjct: 618 LMKESAINLSAATYNSLMHMYSRLGDCEKCENILTEIKSSGVRPDRYSYNTVIYAYGRKG 677

Query: 410 YLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYS 469
            + EA  +F +M+  G +PD VTY   +  +      + A+++ + M   G  P+  TY+
Sbjct: 678 QMKEASRLFSEMKCSGLKPDVVTYNIFVKSYVSNSMFEEAIELVRYMVTQGCKPNERTYN 737

Query: 470 VIINCLGKAGHLQAA 484
            I+    + G L  A
Sbjct: 738 SIVEGYCRNGKLTDA 752



 Score = 49.7 bits (117), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 33/128 (25%), Positives = 55/128 (42%), Gaps = 5/128 (3%)

Query: 524 RDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKA 583
           R++   G        +  + V+   G L EA A+          PD   Y  LV  + +A
Sbjct: 130 RELHGEGVLHHPRVLATAIRVMARAGRLAEASALLDAAPG----PDAGAYTALVSAFSRA 185

Query: 584 GNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVG-QLSDAYHLLQGMLNLGLKPSLQT 642
           G  R A   +  M+ +G++P + T N +L  + ++     +   L+  M   G+ P   T
Sbjct: 186 GRFRDAVAVFRRMVDSGVQPAIVTYNVVLHVYSKMAVPWKEVVELVASMKEHGVAPDRYT 245

Query: 643 YTLLLSCC 650
           Y  L+SCC
Sbjct: 246 YNTLISCC 253



 Score = 41.6 bits (96), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 23/86 (26%), Positives = 46/86 (53%), Gaps = 4/86 (4%)

Query: 572 VYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGM 631
           V    + +  +AG + +A     A+L A   P+     +L+SAF R G+  DA  + + M
Sbjct: 143 VLATAIRVMARAGRLAEA----SALLDAAPGPDAGAYTALVSAFSRAGRFRDAVAVFRRM 198

Query: 632 LNLGLKPSLQTYTLLLSCCTEARSPY 657
           ++ G++P++ TY ++L   ++   P+
Sbjct: 199 VDSGVQPAIVTYNVVLHVYSKMAVPW 224


>gi|115473111|ref|NP_001060154.1| Os07g0590600 [Oryza sativa Japonica Group]
 gi|34393454|dbj|BAC82993.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|113611690|dbj|BAF22068.1| Os07g0590600 [Oryza sativa Japonica Group]
          Length = 784

 Score =  198 bits (504), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 100/303 (33%), Positives = 168/303 (55%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           ++ G   D +TY T++    R   +    ++ D+M   G +P+ VT+N L+  YG+A   
Sbjct: 235 KEHGVAPDRYTYNTLISCCRRRALYKEAAQVFDEMKASGFEPDKVTFNSLLDVYGKARRH 294

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
           +EA++V ++M+ VGC P  VTY +LI  + K G L+ A+ + ++M+  G+ PD  TY+ +
Sbjct: 295 DEAIEVIQEMERVGCPPSVVTYNSLISSYVKDGLLEQAVALKQEMEVKGMKPDVVTYTTL 354

Query: 472 INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF 531
           I+ L +AG + AA   + EMV  GC PNL TYN +I +      +   + ++ + ++AGF
Sbjct: 355 ISGLDRAGKIDAAIVEYDEMVRNGCKPNLCTYNALIKMHGVRGKFPEMMAVFDEFRSAGF 414

Query: 532 EPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWE 591
            PD VT++ ++ V G  G   E   VF EM++  ++P+   Y  L+  + + G    A +
Sbjct: 415 VPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKKAGYIPERDTYVSLISSYSRCGLFDLAMQ 474

Query: 592 WYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCT 651
            Y+ M++AG+ P+V T N++LSA  R G+   A  L   M     KP   +Y+ LL    
Sbjct: 475 IYKRMMEAGIYPDVSTYNAVLSALARGGRWEQAEKLFAEMEERDCKPDEYSYSSLLHAYA 534

Query: 652 EAR 654
            A+
Sbjct: 535 NAK 537



 Score =  151 bits (382), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 96/328 (29%), Positives = 156/328 (47%), Gaps = 35/328 (10%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYG-------- 406
           G K D  TYTT++  L RA +  A     D+MVR+GC+PN+ TYN LI  +G        
Sbjct: 343 GMKPDVVTYTTLISGLDRAGKIDAAIVEYDEMVRNGCKPNLCTYNALIKMHGVRGKFPEM 402

Query: 407 ----------------------RANYLNEALD-----VFKQMQVVGCEPDRVTYCTLIDI 439
                                  A +    LD     VFK+M+  G  P+R TY +LI  
Sbjct: 403 MAVFDEFRSAGFVPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKKAGYIPERDTYVSLISS 462

Query: 440 HAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPN 499
           +++ G  D+AM +YK+M  AG+ PD  TY+ +++ L + G  + A +LF EM  + C P+
Sbjct: 463 YSRCGLFDLAMQIYKRMMEAGIYPDVSTYNAVLSALARGGRWEQAEKLFAEMEERDCKPD 522

Query: 500 LVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFA 559
             +Y+ ++   A A+       L  D+ +   EP       ++ V      L EAE  F 
Sbjct: 523 EYSYSSLLHAYANAKRLDKMKALSDDIYSERIEPHNWLVKTLVLVNSKVNNLAEAEKAFL 582

Query: 560 EMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVG 619
           E+R+K    D  V   +V ++GK   VRK  +    M ++ +  +  T NSL+  + R+G
Sbjct: 583 ELRQKRCSLDINVLNAMVSIYGKNRMVRKVEKILSLMKESAINLSAATYNSLMHMYSRLG 642

Query: 620 QLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
                 ++L  + + G++P   +Y  ++
Sbjct: 643 DCEKCENILTEIKSSGVRPDRYSYNTVI 670



 Score =  124 bits (311), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 78/308 (25%), Positives = 142/308 (46%), Gaps = 35/308 (11%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGC-------------------- 391
           + +GF+ D+ T+ +++ + G+AR+     +++ +M R GC                    
Sbjct: 270 KASGFEPDKVTFNSLLDVYGKARRHDEAIEVIQEMERVGCPPSVVTYNSLISSYVKDGLL 329

Query: 392 ---------------QPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTL 436
                          +P+VVTY  LI    RA  ++ A+  + +M   GC+P+  TY  L
Sbjct: 330 EQAVALKQEMEVKGMKPDVVTYTTLISGLDRAGKIDAAIVEYDEMVRNGCKPNLCTYNAL 389

Query: 437 IDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGC 496
           I +H   G     M ++ + ++AG  PD  T++ ++   G+ G       +F EM   G 
Sbjct: 390 IKMHGVRGKFPEMMAVFDEFRSAGFVPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKKAGY 449

Query: 497 IPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEA 556
           IP   TY  +I+  ++   +  A+++Y+ M  AG  PD  TY+ V+  L   G  ++AE 
Sbjct: 450 IPERDTYVSLISSYSRCGLFDLAMQIYKRMMEAGIYPDVSTYNAVLSALARGGRWEQAEK 509

Query: 557 VFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFL 616
           +FAEM  ++  PDE  Y  L+  +  A  + K     + +    + P+     +L+    
Sbjct: 510 LFAEMEERDCKPDEYSYSSLLHAYANAKRLDKMKALSDDIYSERIEPHNWLVKTLVLVNS 569

Query: 617 RVGQLSDA 624
           +V  L++A
Sbjct: 570 KVNNLAEA 577



 Score =  121 bits (304), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 68/299 (22%), Positives = 142/299 (47%), Gaps = 1/299 (0%)

Query: 345 GFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHS 404
           G F  +++ AG+  +  TY +++    R   F    ++  +M+  G  P+V TYN ++ +
Sbjct: 439 GVFKEMKK-AGYIPERDTYVSLISSYSRCGLFDLAMQIYKRMMEAGIYPDVSTYNAVLSA 497

Query: 405 YGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPD 464
             R     +A  +F +M+   C+PD  +Y +L+  +A A  LD    +   + +  + P 
Sbjct: 498 LARGGRWEQAEKLFAEMEERDCKPDEYSYSSLLHAYANAKRLDKMKALSDDIYSERIEPH 557

Query: 465 TFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYR 524
            +    ++    K  +L  A + F E+  + C  ++   N M+++  K R  +   K+  
Sbjct: 558 NWLVKTLVLVNSKVNNLAEAEKAFLELRQKRCSLDINVLNAMVSIYGKNRMVRKVEKILS 617

Query: 525 DMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAG 584
            M+ +       TY+ +M +    G  ++ E +  E++     PD   Y  ++  +G+ G
Sbjct: 618 LMKESAINLSAATYNSLMHMYSRLGDCEKCENILTEIKSSGVRPDRYSYNTVIYAYGRKG 677

Query: 585 NVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTY 643
            +++A   +  M  +GL+P+V T N  + +++      +A  L++ M+  G KP+ +TY
Sbjct: 678 QMKEASRLFSEMKCSGLKPDVVTYNIFVKSYVSNSMFEEAIELVRYMVTQGCKPNERTY 736



 Score =  114 bits (284), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 70/215 (32%), Positives = 115/215 (53%), Gaps = 5/215 (2%)

Query: 435 TLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQ 494
           T I + A+AG L  A      +  A   PD   Y+ +++   +AG  + A  +F  MV+ 
Sbjct: 146 TAIRVMARAGRLAEA----SALLDAAPGPDAGAYTALVSAFSRAGRFRDAVAVFRRMVDS 201

Query: 495 GCIPNLVTYNIMIALQAK-ARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDE 553
           G  P +VTYN+++ + +K A  ++  ++L   M+  G  PD+ TY+ ++          E
Sbjct: 202 GVQPAIVTYNVVLHVYSKMAVPWKEVVELVASMKEHGVAPDRYTYNTLISCCRRRALYKE 261

Query: 554 AEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLS 613
           A  VF EM+   + PD+  +  L+D++GKA    +A E  + M + G  P+V T NSL+S
Sbjct: 262 AAQVFDEMKASGFEPDKVTFNSLLDVYGKARRHDEAIEVIQEMERVGCPPSVVTYNSLIS 321

Query: 614 AFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
           ++++ G L  A  L Q M   G+KP + TYT L+S
Sbjct: 322 SYVKDGLLEQAVALKQEMEVKGMKPDVVTYTTLIS 356



 Score =  102 bits (254), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 63/272 (23%), Positives = 127/272 (46%)

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
           +AG   D  TY  ++  L R  ++    KL  +M    C+P+  +Y+ L+H+Y  A  L+
Sbjct: 481 EAGIYPDVSTYNAVLSALARGGRWEQAEKLFAEMEERDCKPDEYSYSSLLHAYANAKRLD 540

Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
           +   +   +     EP      TL+ +++K   L  A   + +++    S D    + ++
Sbjct: 541 KMKALSDDIYSERIEPHNWLVKTLVLVNSKVNNLAEAEKAFLELRQKRCSLDINVLNAMV 600

Query: 473 NCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFE 532
           +  GK   ++   ++   M       +  TYN ++ + ++  + +    +  +++++G  
Sbjct: 601 SIYGKNRMVRKVEKILSLMKESAINLSAATYNSLMHMYSRLGDCEKCENILTEIKSSGVR 660

Query: 533 PDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEW 592
           PD+ +Y+ V+   G  G + EA  +F+EM+     PD   Y + V  +       +A E 
Sbjct: 661 PDRYSYNTVIYAYGRKGQMKEASRLFSEMKCSGLKPDVVTYNIFVKSYVSNSMFEEAIEL 720

Query: 593 YEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDA 624
              M+  G +PN  T NS++  + R G+L+DA
Sbjct: 721 VRYMVTQGCKPNERTYNSIVEGYCRNGKLTDA 752



 Score = 83.6 bits (205), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 45/193 (23%), Positives = 99/193 (51%), Gaps = 4/193 (2%)

Query: 365 TMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVV 424
           T+V +  +        K   ++ +  C  ++   N ++  YG+   + +   +   M+  
Sbjct: 563 TLVLVNSKVNNLAEAEKAFLELRQKRCSLDINVLNAMVSIYGKNRMVRKVEKILSLMKES 622

Query: 425 GCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAA 484
                  TY +L+ ++++ G  +   ++  +++++G+ PD ++Y+ +I   G+ G ++ A
Sbjct: 623 AINLSAATYNSLMHMYSRLGDCEKCENILTEIKSSGVRPDRYSYNTVIYAYGRKGQMKEA 682

Query: 485 HQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEV 544
            +LF EM   G  P++VTYNI +        ++ A++L R M   G +P++ TY+ ++E 
Sbjct: 683 SRLFSEMKCSGLKPDVVTYNIFVKSYVSNSMFEEAIELVRYMVTQGCKPNERTYNSIVE- 741

Query: 545 LGHC--GYLDEAE 555
            G+C  G L +A+
Sbjct: 742 -GYCRNGKLTDAK 753



 Score = 65.1 bits (157), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 33/135 (24%), Positives = 65/135 (48%)

Query: 350 LRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRAN 409
           L +++       TY +++ +  R         +L ++   G +P+  +YN +I++YGR  
Sbjct: 618 LMKESAINLSAATYNSLMHMYSRLGDCEKCENILTEIKSSGVRPDRYSYNTVIYAYGRKG 677

Query: 410 YLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYS 469
            + EA  +F +M+  G +PD VTY   +  +      + A+++ + M   G  P+  TY+
Sbjct: 678 QMKEASRLFSEMKCSGLKPDVVTYNIFVKSYVSNSMFEEAIELVRYMVTQGCKPNERTYN 737

Query: 470 VIINCLGKAGHLQAA 484
            I+    + G L  A
Sbjct: 738 SIVEGYCRNGKLTDA 752



 Score = 49.3 bits (116), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 33/128 (25%), Positives = 55/128 (42%), Gaps = 5/128 (3%)

Query: 524 RDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKA 583
           R++   G        +  + V+   G L EA A+          PD   Y  LV  + +A
Sbjct: 130 RELHGEGVLHHPRVLATAIRVMARAGRLAEASALLDAAPG----PDAGAYTALVSAFSRA 185

Query: 584 GNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVG-QLSDAYHLLQGMLNLGLKPSLQT 642
           G  R A   +  M+ +G++P + T N +L  + ++     +   L+  M   G+ P   T
Sbjct: 186 GRFRDAVAVFRRMVDSGVQPAIVTYNVVLHVYSKMAVPWKEVVELVASMKEHGVAPDRYT 245

Query: 643 YTLLLSCC 650
           Y  L+SCC
Sbjct: 246 YNTLISCC 253



 Score = 41.6 bits (96), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 23/86 (26%), Positives = 46/86 (53%), Gaps = 4/86 (4%)

Query: 572 VYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGM 631
           V    + +  +AG + +A     A+L A   P+     +L+SAF R G+  DA  + + M
Sbjct: 143 VLATAIRVMARAGRLAEA----SALLDAAPGPDAGAYTALVSAFSRAGRFRDAVAVFRRM 198

Query: 632 LNLGLKPSLQTYTLLLSCCTEARSPY 657
           ++ G++P++ TY ++L   ++   P+
Sbjct: 199 VDSGVQPAIVTYNVVLHVYSKMAVPW 224


>gi|168055632|ref|XP_001779828.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162668740|gb|EDQ55341.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 730

 Score =  198 bits (504), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 99/304 (32%), Positives = 164/304 (53%), Gaps = 1/304 (0%)

Query: 344 LGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIH 403
           L  F  ++ Q G + DE+TY T +             +L  QM    C P+ VTYN L+ 
Sbjct: 173 LELFEEMKAQ-GIQPDEYTYNTAITACASGSLCEEATELFTQMKSSNCTPDRVTYNALLD 231

Query: 404 SYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSP 463
            YG+A + NEA +V K+M+  GC P+ VTY  L+    +AG  + A +M   M + G+ P
Sbjct: 232 VYGKAGWYNEAANVLKEMESAGCLPNIVTYNELLSAFGRAGLCNAAAEMKDSMVSKGIEP 291

Query: 464 DTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLY 523
           D FTY+ +++   +AG ++ A +++ +M    C PN  T+N +I +  K +N+   + ++
Sbjct: 292 DVFTYTSLLSAYSRAGKVEQAMEIYNQMRTSNCTPNSFTFNALIGMHGKNKNFSEMMVIF 351

Query: 524 RDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKA 583
            DMQ  G EPD VT++ ++   G  G   E   VF  M++  + PD+  + +L++ +G+ 
Sbjct: 352 EDMQACGVEPDIVTWNSLLGAFGKNGMYSEVLKVFRGMKKAGFEPDKATFNILIEAYGRC 411

Query: 584 GNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTY 643
           G+  +A   Y+ MLQAG  P++ T N+LL+A  R G+   A  +L  +     KP+   Y
Sbjct: 412 GSSDQALSIYDGMLQAGCTPDLATFNTLLAALAREGRWEHAELILDELNRSSYKPNDIAY 471

Query: 644 TLLL 647
             +L
Sbjct: 472 ASML 475



 Score =  166 bits (419), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 91/300 (30%), Positives = 161/300 (53%), Gaps = 11/300 (3%)

Query: 359 DEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVF 418
           D  TY  ++ + G+A  +     +L +M   GC PN+VTYN L+ ++GRA   N A ++ 
Sbjct: 222 DRVTYNALLDVYGKAGWYNEAANVLKEMESAGCLPNIVTYNELLSAFGRAGLCNAAAEMK 281

Query: 419 KQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKA 478
             M   G EPD  TY +L+  +++AG ++ AM++Y +M+ +  +P++FT++ +I   GK 
Sbjct: 282 DSMVSKGIEPDVFTYTSLLSAYSRAGKVEQAMEIYNQMRTSNCTPNSFTFNALIGMHGKN 341

Query: 479 GHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTY 538
            +      +F +M   G  P++VT+N ++    K   Y   LK++R M+ AGFEPDK T+
Sbjct: 342 KNFSEMMVIFEDMQACGVEPDIVTWNSLLGAFGKNGMYSEVLKVFRGMKKAGFEPDKATF 401

Query: 539 SIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAML- 597
           +I++E  G CG  D+A +++  M +    PD   +  L+    + G     WE  E +L 
Sbjct: 402 NILIEAYGRCGSSDQALSIYDGMLQAGCTPDLATFNTLLAALAREGR----WEHAELILD 457

Query: 598 ---QAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGL---KPSLQTYTLLLSCCT 651
              ++  +PN     S+L A+   G+L     ++  +  + +   K  L+T+ L+ S C+
Sbjct: 458 ELNRSSYKPNDIAYASMLHAYANGGELEKLKEMVDTLHTIYVPFTKILLKTFVLVYSKCS 517



 Score =  139 bits (349), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 76/305 (24%), Positives = 145/305 (47%), Gaps = 1/305 (0%)

Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLI 402
           A+  +N +R  +    +  T+  ++G+ G+ + F  +  + + M   G +P++VT+N L+
Sbjct: 312 AMEIYNQMR-TSNCTPNSFTFNALIGMHGKNKNFSEMMVIFEDMQACGVEPDIVTWNSLL 370

Query: 403 HSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLS 462
            ++G+    +E L VF+ M+  G EPD+ T+  LI+ + + G  D A+ +Y  M  AG +
Sbjct: 371 GAFGKNGMYSEVLKVFRGMKKAGFEPDKATFNILIEAYGRCGSSDQALSIYDGMLQAGCT 430

Query: 463 PDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKL 522
           PD  T++ ++  L + G  + A  +  E+      PN + Y  M+   A     +   ++
Sbjct: 431 PDLATFNTLLAALAREGRWEHAELILDELNRSSYKPNDIAYASMLHAYANGGELEKLKEM 490

Query: 523 YRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGK 582
              +        K+     + V   C  +DEAE  F  MR   ++ D   +  ++ ++GK
Sbjct: 491 VDTLHTIYVPFTKILLKTFVLVYSKCSLVDEAEDAFLAMRHHGYLSDTSTFNAMISMYGK 550

Query: 583 AGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQT 642
            G + KA + +  +   GL P+V T N L+  + R G        L+  +  G  P L +
Sbjct: 551 KGMMDKATDTFALLRSTGLEPDVVTYNCLMGMYGREGMYRKCEATLRECMAAGQTPDLVS 610

Query: 643 YTLLL 647
           Y  ++
Sbjct: 611 YNTVI 615



 Score =  117 bits (293), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 68/277 (24%), Positives = 129/277 (46%)

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
           QAG   D  T+ T++  L R  ++     +LD++ R   +PN + Y  ++H+Y     L 
Sbjct: 426 QAGCTPDLATFNTLLAALAREGRWEHAELILDELNRSSYKPNDIAYASMLHAYANGGELE 485

Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
           +  ++   +  +     ++   T + +++K   +D A D +  M+  G   DT T++ +I
Sbjct: 486 KLKEMVDTLHTIYVPFTKILLKTFVLVYSKCSLVDEAEDAFLAMRHHGYLSDTSTFNAMI 545

Query: 473 NCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFE 532
           +  GK G +  A   F  + + G  P++VTYN ++ +  +   Y+      R+   AG  
Sbjct: 546 SMYGKKGMMDKATDTFALLRSTGLEPDVVTYNCLMGMYGREGMYRKCEATLRECMAAGQT 605

Query: 533 PDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEW 592
           PD V+Y+ V+      G L  A  +F EM      PD   Y   V  +   G   +A   
Sbjct: 606 PDLVSYNTVIFSYSKHGQLSSATRIFHEMVSNGIQPDSFTYNTFVGCYVNGGMFPEALSV 665

Query: 593 YEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQ 629
            + M + G +P+  T  +L+ A+ ++G+  +   +L+
Sbjct: 666 VKHMHKTGCKPDEVTYRTLVDAYCKIGKFEEVERILK 702



 Score =  116 bits (291), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 75/328 (22%), Positives = 141/328 (42%), Gaps = 35/328 (10%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           G + D  T+ +++G  G+   +  + K+   M + G +P+  T+N LI +YGR    ++A
Sbjct: 358 GVEPDIVTWNSLLGAFGKNGMYSEVLKVFRGMKKAGFEPDKATFNILIEAYGRCGSSDQA 417

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
           L ++  M   GC PD  T+ TL+   A+ G  + A  +  ++  +   P+   Y+ +++ 
Sbjct: 418 LSIYDGMLQAGCTPDLATFNTLLAALAREGRWEHAELILDELNRSSYKPNDIAYASMLHA 477

Query: 475 LGKAGHLQAAHQL-----------------------------------FCEMVNQGCIPN 499
               G L+   ++                                   F  M + G + +
Sbjct: 478 YANGGELEKLKEMVDTLHTIYVPFTKILLKTFVLVYSKCSLVDEAEDAFLAMRHHGYLSD 537

Query: 500 LVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFA 559
             T+N MI++  K      A   +  +++ G EPD VTY+ +M + G  G   + EA   
Sbjct: 538 TSTFNAMISMYGKKGMMDKATDTFALLRSTGLEPDVVTYNCLMGMYGREGMYRKCEATLR 597

Query: 560 EMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVG 619
           E       PD   Y  ++  + K G +  A   +  M+  G++P+  T N+ +  ++  G
Sbjct: 598 ECMAAGQTPDLVSYNTVIFSYSKHGQLSSATRIFHEMVSNGIQPDSFTYNTFVGCYVNGG 657

Query: 620 QLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
              +A  +++ M   G KP   TY  L+
Sbjct: 658 MFPEALSVVKHMHKTGCKPDEVTYRTLV 685



 Score = 88.6 bits (218), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 48/187 (25%), Positives = 85/187 (45%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           R  G+  D  T+  M+ + G+             +   G +P+VVTYN L+  YGR    
Sbjct: 530 RHHGYLSDTSTFNAMISMYGKKGMMDKATDTFALLRSTGLEPDVVTYNCLMGMYGREGMY 589

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
            +     ++    G  PD V+Y T+I  ++K G L  A  ++ +M + G+ PD+FTY+  
Sbjct: 590 RKCEATLRECMAAGQTPDLVSYNTVIFSYSKHGQLSSATRIFHEMVSNGIQPDSFTYNTF 649

Query: 472 INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF 531
           + C    G    A  +   M   GC P+ VTY  ++    K   ++   ++ + ++++  
Sbjct: 650 VGCYVNGGMFPEALSVVKHMHKTGCKPDEVTYRTLVDAYCKIGKFEEVERILKFIKSSDP 709

Query: 532 EPDKVTY 538
              K  Y
Sbjct: 710 NFSKAAY 716



 Score = 79.0 bits (193), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 39/139 (28%), Positives = 65/139 (46%)

Query: 350 LRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRAN 409
           L R  G + D  TY  ++G+ GR   +      L + +  G  P++V+YN +I SY +  
Sbjct: 563 LLRSTGLEPDVVTYNCLMGMYGREGMYRKCEATLRECMAAGQTPDLVSYNTVIFSYSKHG 622

Query: 410 YLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYS 469
            L+ A  +F +M   G +PD  TY T +  +   G    A+ + K M   G  PD  TY 
Sbjct: 623 QLSSATRIFHEMVSNGIQPDSFTYNTFVGCYVNGGMFPEALSVVKHMHKTGCKPDEVTYR 682

Query: 470 VIINCLGKAGHLQAAHQLF 488
            +++   K G  +   ++ 
Sbjct: 683 TLVDAYCKIGKFEEVERIL 701


>gi|125600921|gb|EAZ40497.1| hypothetical protein OsJ_24952 [Oryza sativa Japonica Group]
          Length = 766

 Score =  198 bits (504), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 100/303 (33%), Positives = 168/303 (55%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           ++ G   D +TY T++    R   +    ++ D+M   G +P+ VT+N L+  YG+A   
Sbjct: 217 KEHGVAPDRYTYNTLISCCRRRALYKEAAQVFDEMKASGFEPDKVTFNSLLDVYGKARRH 276

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
           +EA++V ++M+ VGC P  VTY +LI  + K G L+ A+ + ++M+  G+ PD  TY+ +
Sbjct: 277 DEAIEVIQEMERVGCPPSVVTYNSLISSYVKDGLLEQAVALKQEMEVKGMKPDVVTYTTL 336

Query: 472 INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF 531
           I+ L +AG + AA   + EMV  GC PNL TYN +I +      +   + ++ + ++AGF
Sbjct: 337 ISGLDRAGKIDAAIVEYDEMVRNGCKPNLCTYNALIKMHGVRGKFPEMMAVFDEFRSAGF 396

Query: 532 EPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWE 591
            PD VT++ ++ V G  G   E   VF EM++  ++P+   Y  L+  + + G    A +
Sbjct: 397 VPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKKAGYIPERDTYVSLISSYSRCGLFDLAMQ 456

Query: 592 WYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCT 651
            Y+ M++AG+ P+V T N++LSA  R G+   A  L   M     KP   +Y+ LL    
Sbjct: 457 IYKRMMEAGIYPDVSTYNAVLSALARGGRWEQAEKLFAEMEERDCKPDEYSYSSLLHAYA 516

Query: 652 EAR 654
            A+
Sbjct: 517 NAK 519



 Score =  151 bits (382), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 96/328 (29%), Positives = 156/328 (47%), Gaps = 35/328 (10%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYG-------- 406
           G K D  TYTT++  L RA +  A     D+MVR+GC+PN+ TYN LI  +G        
Sbjct: 325 GMKPDVVTYTTLISGLDRAGKIDAAIVEYDEMVRNGCKPNLCTYNALIKMHGVRGKFPEM 384

Query: 407 ----------------------RANYLNEALD-----VFKQMQVVGCEPDRVTYCTLIDI 439
                                  A +    LD     VFK+M+  G  P+R TY +LI  
Sbjct: 385 MAVFDEFRSAGFVPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKKAGYIPERDTYVSLISS 444

Query: 440 HAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPN 499
           +++ G  D+AM +YK+M  AG+ PD  TY+ +++ L + G  + A +LF EM  + C P+
Sbjct: 445 YSRCGLFDLAMQIYKRMMEAGIYPDVSTYNAVLSALARGGRWEQAEKLFAEMEERDCKPD 504

Query: 500 LVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFA 559
             +Y+ ++   A A+       L  D+ +   EP       ++ V      L EAE  F 
Sbjct: 505 EYSYSSLLHAYANAKRLDKMKALSDDIYSERIEPHNWLVKTLVLVNSKVNNLAEAEKAFL 564

Query: 560 EMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVG 619
           E+R+K    D  V   +V ++GK   VRK  +    M ++ +  +  T NSL+  + R+G
Sbjct: 565 ELRQKRCSLDINVLNAMVSIYGKNRMVRKVEKILSLMKESAINLSAATYNSLMHMYSRLG 624

Query: 620 QLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
                 ++L  + + G++P   +Y  ++
Sbjct: 625 DCEKCENILTEIKSSGVRPDRYSYNTVI 652



 Score =  132 bits (331), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 79/295 (26%), Positives = 146/295 (49%), Gaps = 5/295 (1%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           G  H      T + ++ RA +    + LLD        P+   Y  L+ ++ RA    +A
Sbjct: 118 GVLHHPRVLATAIRVMARAGRLAEASALLDA----APGPDAGAYTALVSAFSRAGRFRDA 173

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGF-LDVAMDMYKKMQAAGLSPDTFTYSVIIN 473
           + VF++M   G +P  VTY  ++ +++K        +++   M+  G++PD +TY+ +I+
Sbjct: 174 VAVFRRMVDSGVQPAIVTYNVVLHVYSKMAVPWKEVVELVASMKEHGVAPDRYTYNTLIS 233

Query: 474 CLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEP 533
           C  +    + A Q+F EM   G  P+ VT+N ++ +  KAR +  A+++ ++M+  G  P
Sbjct: 234 CCRRRALYKEAAQVFDEMKASGFEPDKVTFNSLLDVYGKARRHDEAIEVIQEMERVGCPP 293

Query: 534 DKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWY 593
             VTY+ ++      G L++A A+  EM  K   PD   Y  L+    +AG +  A   Y
Sbjct: 294 SVVTYNSLISSYVKDGLLEQAVALKQEMEVKGMKPDVVTYTTLISGLDRAGKIDAAIVEY 353

Query: 594 EAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
           + M++ G +PN+ T N+L+      G+  +   +     + G  P + T+  LL+
Sbjct: 354 DEMVRNGCKPNLCTYNALIKMHGVRGKFPEMMAVFDEFRSAGFVPDIVTWNTLLA 408



 Score =  124 bits (310), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 78/308 (25%), Positives = 142/308 (46%), Gaps = 35/308 (11%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGC-------------------- 391
           + +GF+ D+ T+ +++ + G+AR+     +++ +M R GC                    
Sbjct: 252 KASGFEPDKVTFNSLLDVYGKARRHDEAIEVIQEMERVGCPPSVVTYNSLISSYVKDGLL 311

Query: 392 ---------------QPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTL 436
                          +P+VVTY  LI    RA  ++ A+  + +M   GC+P+  TY  L
Sbjct: 312 EQAVALKQEMEVKGMKPDVVTYTTLISGLDRAGKIDAAIVEYDEMVRNGCKPNLCTYNAL 371

Query: 437 IDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGC 496
           I +H   G     M ++ + ++AG  PD  T++ ++   G+ G       +F EM   G 
Sbjct: 372 IKMHGVRGKFPEMMAVFDEFRSAGFVPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKKAGY 431

Query: 497 IPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEA 556
           IP   TY  +I+  ++   +  A+++Y+ M  AG  PD  TY+ V+  L   G  ++AE 
Sbjct: 432 IPERDTYVSLISSYSRCGLFDLAMQIYKRMMEAGIYPDVSTYNAVLSALARGGRWEQAEK 491

Query: 557 VFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFL 616
           +FAEM  ++  PDE  Y  L+  +  A  + K     + +    + P+     +L+    
Sbjct: 492 LFAEMEERDCKPDEYSYSSLLHAYANAKRLDKMKALSDDIYSERIEPHNWLVKTLVLVNS 551

Query: 617 RVGQLSDA 624
           +V  L++A
Sbjct: 552 KVNNLAEA 559



 Score =  121 bits (303), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 68/299 (22%), Positives = 142/299 (47%), Gaps = 1/299 (0%)

Query: 345 GFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHS 404
           G F  +++ AG+  +  TY +++    R   F    ++  +M+  G  P+V TYN ++ +
Sbjct: 421 GVFKEMKK-AGYIPERDTYVSLISSYSRCGLFDLAMQIYKRMMEAGIYPDVSTYNAVLSA 479

Query: 405 YGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPD 464
             R     +A  +F +M+   C+PD  +Y +L+  +A A  LD    +   + +  + P 
Sbjct: 480 LARGGRWEQAEKLFAEMEERDCKPDEYSYSSLLHAYANAKRLDKMKALSDDIYSERIEPH 539

Query: 465 TFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYR 524
            +    ++    K  +L  A + F E+  + C  ++   N M+++  K R  +   K+  
Sbjct: 540 NWLVKTLVLVNSKVNNLAEAEKAFLELRQKRCSLDINVLNAMVSIYGKNRMVRKVEKILS 599

Query: 525 DMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAG 584
            M+ +       TY+ +M +    G  ++ E +  E++     PD   Y  ++  +G+ G
Sbjct: 600 LMKESAINLSAATYNSLMHMYSRLGDCEKCENILTEIKSSGVRPDRYSYNTVIYAYGRKG 659

Query: 585 NVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTY 643
            +++A   +  M  +GL+P+V T N  + +++      +A  L++ M+  G KP+ +TY
Sbjct: 660 QMKEASRLFSEMKCSGLKPDVVTYNIFVKSYVSNSMFEEAIELVRYMVTQGCKPNERTY 718



 Score =  102 bits (253), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 63/272 (23%), Positives = 127/272 (46%)

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
           +AG   D  TY  ++  L R  ++    KL  +M    C+P+  +Y+ L+H+Y  A  L+
Sbjct: 463 EAGIYPDVSTYNAVLSALARGGRWEQAEKLFAEMEERDCKPDEYSYSSLLHAYANAKRLD 522

Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
           +   +   +     EP      TL+ +++K   L  A   + +++    S D    + ++
Sbjct: 523 KMKALSDDIYSERIEPHNWLVKTLVLVNSKVNNLAEAEKAFLELRQKRCSLDINVLNAMV 582

Query: 473 NCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFE 532
           +  GK   ++   ++   M       +  TYN ++ + ++  + +    +  +++++G  
Sbjct: 583 SIYGKNRMVRKVEKILSLMKESAINLSAATYNSLMHMYSRLGDCEKCENILTEIKSSGVR 642

Query: 533 PDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEW 592
           PD+ +Y+ V+   G  G + EA  +F+EM+     PD   Y + V  +       +A E 
Sbjct: 643 PDRYSYNTVIYAYGRKGQMKEASRLFSEMKCSGLKPDVVTYNIFVKSYVSNSMFEEAIEL 702

Query: 593 YEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDA 624
              M+  G +PN  T NS++  + R G+L+DA
Sbjct: 703 VRYMVTQGCKPNERTYNSIVEGYCRNGKLTDA 734



 Score = 83.6 bits (205), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 45/193 (23%), Positives = 99/193 (51%), Gaps = 4/193 (2%)

Query: 365 TMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVV 424
           T+V +  +        K   ++ +  C  ++   N ++  YG+   + +   +   M+  
Sbjct: 545 TLVLVNSKVNNLAEAEKAFLELRQKRCSLDINVLNAMVSIYGKNRMVRKVEKILSLMKES 604

Query: 425 GCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAA 484
                  TY +L+ ++++ G  +   ++  +++++G+ PD ++Y+ +I   G+ G ++ A
Sbjct: 605 AINLSAATYNSLMHMYSRLGDCEKCENILTEIKSSGVRPDRYSYNTVIYAYGRKGQMKEA 664

Query: 485 HQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEV 544
            +LF EM   G  P++VTYNI +        ++ A++L R M   G +P++ TY+ ++E 
Sbjct: 665 SRLFSEMKCSGLKPDVVTYNIFVKSYVSNSMFEEAIELVRYMVTQGCKPNERTYNSIVE- 723

Query: 545 LGHC--GYLDEAE 555
            G+C  G L +A+
Sbjct: 724 -GYCRNGKLTDAK 735



 Score = 65.1 bits (157), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 33/135 (24%), Positives = 65/135 (48%)

Query: 350 LRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRAN 409
           L +++       TY +++ +  R         +L ++   G +P+  +YN +I++YGR  
Sbjct: 600 LMKESAINLSAATYNSLMHMYSRLGDCEKCENILTEIKSSGVRPDRYSYNTVIYAYGRKG 659

Query: 410 YLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYS 469
            + EA  +F +M+  G +PD VTY   +  +      + A+++ + M   G  P+  TY+
Sbjct: 660 QMKEASRLFSEMKCSGLKPDVVTYNIFVKSYVSNSMFEEAIELVRYMVTQGCKPNERTYN 719

Query: 470 VIINCLGKAGHLQAA 484
            I+    + G L  A
Sbjct: 720 SIVEGYCRNGKLTDA 734



 Score = 49.3 bits (116), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 33/128 (25%), Positives = 55/128 (42%), Gaps = 5/128 (3%)

Query: 524 RDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKA 583
           R++   G        +  + V+   G L EA A+          PD   Y  LV  + +A
Sbjct: 112 RELHGEGVLHHPRVLATAIRVMARAGRLAEASALLDAAPG----PDAGAYTALVSAFSRA 167

Query: 584 GNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVG-QLSDAYHLLQGMLNLGLKPSLQT 642
           G  R A   +  M+ +G++P + T N +L  + ++     +   L+  M   G+ P   T
Sbjct: 168 GRFRDAVAVFRRMVDSGVQPAIVTYNVVLHVYSKMAVPWKEVVELVASMKEHGVAPDRYT 227

Query: 643 YTLLLSCC 650
           Y  L+SCC
Sbjct: 228 YNTLISCC 235



 Score = 41.6 bits (96), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 23/86 (26%), Positives = 46/86 (53%), Gaps = 4/86 (4%)

Query: 572 VYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGM 631
           V    + +  +AG + +A     A+L A   P+     +L+SAF R G+  DA  + + M
Sbjct: 125 VLATAIRVMARAGRLAEA----SALLDAAPGPDAGAYTALVSAFSRAGRFRDAVAVFRRM 180

Query: 632 LNLGLKPSLQTYTLLLSCCTEARSPY 657
           ++ G++P++ TY ++L   ++   P+
Sbjct: 181 VDSGVQPAIVTYNVVLHVYSKMAVPW 206


>gi|225437600|ref|XP_002271180.1| PREDICTED: pentatricopeptide repeat-containing protein At2g31400,
           chloroplastic [Vitis vinifera]
          Length = 867

 Score =  197 bits (500), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 139/530 (26%), Positives = 246/530 (46%), Gaps = 50/530 (9%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           G + D  TY T++  + +  Q     +++ +M R    PNVVTY+ +I  Y +A  L+EA
Sbjct: 321 GIEQDIFTYNTLLDAVCKGGQMDLAFQIMSEMPRKHIMPNVVTYSTVIDGYAKAGRLDEA 380

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
           L++F +M+      DRV+Y TL+ I+AK G  + A+++ K+M+++G+  D  TY+ ++  
Sbjct: 381 LNLFNEMKFASIGLDRVSYNTLLSIYAKLGRFEEALNVCKEMESSGIKKDAVTYNALLGG 440

Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPD 534
            GK G  +   ++F EM  +   PNL+TY+ +I + +K   YQ A++++R+ + AG + D
Sbjct: 441 YGKQGKYEEVKRVFEEMKAERIFPNLLTYSTLIDVYSKGGLYQEAMEVFREFKKAGLKAD 500

Query: 535 KVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAG---------- 584
            V YS +++ L   G ++ A +   EM ++   P+   Y  ++D +G++G          
Sbjct: 501 VVLYSALIDALCKNGLVESAVSFLDEMTKEGIRPNVVTYNSIIDAFGRSGSAECVIDPPY 560

Query: 585 --NVRKAWEWYEAMLQAGLRPNV--PTCNSLLSAFLRVGQLSDA---------------- 624
             NV K       +++      V     N ++  F   GQL+                  
Sbjct: 561 ETNVSKMSSSSLKVVEDATESEVGDKEDNQIIKIF---GQLAAEKTCHAKKENRGRQEIL 617

Query: 625 --YHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGFCHELMAVSGHP----AHMFLL 678
               +   M  L +KP++ T++ +L+ C+   S  D     E + +  +     AH  L+
Sbjct: 618 CILAVFHKMHELDIKPNVVTFSAILNACSRCNSFEDASMLLEELRLFDNQVYGVAHGLLM 677

Query: 679 SMPSPGPDGQNVRDHVGSFLEMMHSEDRESKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQ 738
                   G NV     S  + +   D  +     +A+ D L   G +  A  V     +
Sbjct: 678 GY------GDNVWVQAQSLFDEVKQMDSSTASAFYNALTDMLWHFGQRRGAQLVVLEGKR 731

Query: 739 KNVYPDAVKEKGMSYWLINLHVMSDGTAVIALSRTLAWFRKQMLISGVGPSRIDIVTGWG 798
           ++V+     E   S   ++LH+MS G A   +   L   R  +      P  + I+TGWG
Sbjct: 732 RHVW-----ENMWSNSCLDLHLMSSGAARAMVHAWLLNIRSIVFEGHELPQLLSILTGWG 786

Query: 799 RRSRVTGTSLVRQAVQELLHMFSFPFFTENGNSGCFVGCGEPLNKWLLQS 848
           + S+V G   +R+A++ LL     PF     N G F+  G  +  WL +S
Sbjct: 787 KHSKVVGDGALRRAIEALLTGMGAPFRVAKCNLGRFISTGAVVAAWLRES 836



 Score =  165 bits (418), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 98/333 (29%), Positives = 172/333 (51%), Gaps = 4/333 (1%)

Query: 316 EALGNTNYSMDAYQANQVLKQLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRAR- 374
           E  GNT Y+  A  +        D   A+  F  ++  +G K +  TY  ++   G+   
Sbjct: 214 EGYGNTVYAFSALISAYGRSGYCDE--AIKVFETMK-SSGLKPNLVTYNAVIDACGKGGV 270

Query: 375 QFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYC 434
            F    ++ D+M+R+G QP+ +T+N L+   GR      A ++F +M   G E D  TY 
Sbjct: 271 DFNRAAEIFDEMLRNGVQPDRITFNSLLAVCGRGGLWEAARNLFSEMLYRGIEQDIFTYN 330

Query: 435 TLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQ 494
           TL+D   K G +D+A  +  +M    + P+  TYS +I+   KAG L  A  LF EM   
Sbjct: 331 TLLDAVCKGGQMDLAFQIMSEMPRKHIMPNVVTYSTVIDGYAKAGRLDEALNLFNEMKFA 390

Query: 495 GCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEA 554
               + V+YN ++++ AK   ++ AL + ++M+++G + D VTY+ ++   G  G  +E 
Sbjct: 391 SIGLDRVSYNTLLSIYAKLGRFEEALNVCKEMESSGIKKDAVTYNALLGGYGKQGKYEEV 450

Query: 555 EAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSA 614
           + VF EM+ +   P+   Y  L+D++ K G  ++A E +    +AGL+ +V   ++L+ A
Sbjct: 451 KRVFEEMKAERIFPNLLTYSTLIDVYSKGGLYQEAMEVFREFKKAGLKADVVLYSALIDA 510

Query: 615 FLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
             + G +  A   L  M   G++P++ TY  ++
Sbjct: 511 LCKNGLVESAVSFLDEMTKEGIRPNVVTYNSII 543



 Score =  148 bits (374), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 101/385 (26%), Positives = 179/385 (46%), Gaps = 13/385 (3%)

Query: 350 LRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRAN 409
           +RR+          + M+ ILGR  Q      + +  + +G    V  ++ LI +YGR+ 
Sbjct: 175 VRREQRRNEQGKLASAMISILGRLGQVELAKNVFETALNEGYGNTVYAFSALISAYGRSG 234

Query: 410 YLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGF-LDVAMDMYKKMQAAGLSPDTFTY 468
           Y +EA+ VF+ M+  G +P+ VTY  +ID   K G   + A +++ +M   G+ PD  T+
Sbjct: 235 YCDEAIKVFETMKSSGLKPNLVTYNAVIDACGKGGVDFNRAAEIFDEMLRNGVQPDRITF 294

Query: 469 SVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQN 528
           + ++   G+ G  +AA  LF EM+ +G   ++ TYN ++    K      A ++  +M  
Sbjct: 295 NSLLAVCGRGGLWEAARNLFSEMLYRGIEQDIFTYNTLLDAVCKGGQMDLAFQIMSEMPR 354

Query: 529 AGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRK 588
               P+ VTYS V++     G LDEA  +F EM+  +   D   Y  L+ ++ K G   +
Sbjct: 355 KHIMPNVVTYSTVIDGYAKAGRLDEALNLFNEMKFASIGLDRVSYNTLLSIYAKLGRFEE 414

Query: 589 AWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
           A    + M  +G++ +  T N+LL  + + G+  +   + + M    + P+L TY+ L+ 
Sbjct: 415 ALNVCKEMESSGIKKDAVTYNALLGGYGKQGKYEEVKRVFEEMKAERIFPNLLTYSTLID 474

Query: 649 CCTEARSPYDMGFCHELMAV------SGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMH 702
             ++       G   E M V      +G  A + L S          + +   SFL+ M 
Sbjct: 475 VYSKG------GLYQEAMEVFREFKKAGLKADVVLYSALIDALCKNGLVESAVSFLDEMT 528

Query: 703 SEDRESKRGLVDAVVDFLHKSGLKE 727
            E         ++++D   +SG  E
Sbjct: 529 KEGIRPNVVTYNSIIDAFGRSGSAE 553



 Score =  105 bits (262), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 86/369 (23%), Positives = 161/369 (43%), Gaps = 16/369 (4%)

Query: 436 LIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQG 495
           +I I  + G +++A ++++     G     + +S +I+  G++G+   A ++F  M + G
Sbjct: 191 MISILGRLGQVELAKNVFETALNEGYGNTVYAFSALISAYGRSGYCDEAIKVFETMKSSG 250

Query: 496 CIPNLVTYNIMIALQAKAR-NYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEA 554
             PNLVTYN +I    K   ++  A +++ +M   G +PD++T++ ++ V G  G  + A
Sbjct: 251 LKPNLVTYNAVIDACGKGGVDFNRAAEIFDEMLRNGVQPDRITFNSLLAVCGRGGLWEAA 310

Query: 555 EAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSA 614
             +F+EM  +    D   Y  L+D   K G +  A++    M +  + PNV T ++++  
Sbjct: 311 RNLFSEMLYRGIEQDIFTYNTLLDAVCKGGQMDLAFQIMSEMPRKHIMPNVVTYSTVIDG 370

Query: 615 FLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTE-ARSPYDMGFCHELMAVSGHPA 673
           + + G+L +A +L   M    +     +Y  LLS   +  R    +  C E M  SG   
Sbjct: 371 YAKAGRLDEALNLFNEMKFASIGLDRVSYNTLLSIYAKLGRFEEALNVCKE-MESSGIKK 429

Query: 674 HMFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRESKRGLVDAVVDFLHKSGLKEEAGSVW 733
                +    G   Q   + V    E M +E           ++D   K GL +EA  V+
Sbjct: 430 DAVTYNALLGGYGKQGKYEEVKRVFEEMKAERIFPNLLTYSTLIDVYSKGGLYQEAMEVF 489

Query: 734 EVAAQKNVYPDAVKEKGMSYWLINLHVMSDGTAVIALSRTLAWFRKQMLISGVGPSRI-- 791
                        K+ G+   ++    + D      L  +   F  +M   G+ P+ +  
Sbjct: 490 R----------EFKKAGLKADVVLYSALIDALCKNGLVESAVSFLDEMTKEGIRPNVVTY 539

Query: 792 -DIVTGWGR 799
             I+  +GR
Sbjct: 540 NSIIDAFGR 548



 Score = 49.7 bits (117), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 54/252 (21%), Positives = 102/252 (40%), Gaps = 49/252 (19%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           ++AG K D   Y+ ++  L +     +    LD+M ++G +PNVVTYN +I ++GR+   
Sbjct: 493 KKAGLKADVVLYSALIDALCKNGLVESAVSFLDEMTKEGIRPNVVTYNSIIDAFGRSGSA 552

Query: 412 NEALDVFKQMQV------------------VGCEPDRVTYCTLIDI------HAKA---G 444
              +D   +  V                  VG + D         +      HAK    G
Sbjct: 553 ECVIDPPYETNVSKMSSSSLKVVEDATESEVGDKEDNQIIKIFGQLAAEKTCHAKKENRG 612

Query: 445 FLDV--AMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEM---------VN 493
             ++   + ++ KM    + P+  T+S I+N   +    + A  L  E+         V 
Sbjct: 613 RQEILCILAVFHKMHELDIKPNVVTFSAILNACSRCNSFEDASMLLEELRLFDNQVYGVA 672

Query: 494 QGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDE 553
            G    L+ Y   + +QA++        L+ +++          Y+ + ++L H G    
Sbjct: 673 HGL---LMGYGDNVWVQAQS--------LFDEVKQMDSSTASAFYNALTDMLWHFGQRRG 721

Query: 554 AEAVFAEMRRKN 565
           A+ V  E +R++
Sbjct: 722 AQLVVLEGKRRH 733



 Score = 47.0 bits (110), Expect = 0.046,   Method: Compositional matrix adjust.
 Identities = 49/216 (22%), Positives = 92/216 (42%), Gaps = 11/216 (5%)

Query: 538 YSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDE--PVYGLLVDLWGKAGNVRKAWEWYEA 595
           Y+ ++  LG+ G   +A   F    R+    +E   +   ++ + G+ G V  A   +E 
Sbjct: 151 YTFLLRELGNRGEWAKAIRCFEFAVRREQRRNEQGKLASAMISILGRLGQVELAKNVFET 210

Query: 596 MLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARS 655
            L  G    V   ++L+SA+ R G   +A  + + M + GLKP+L TY  ++  C +   
Sbjct: 211 ALNEGYGNTVYAFSALISAYGRSGYCDEAIKVFETMKSSGLKPNLVTYNAVIDACGKGGV 270

Query: 656 PYDMG--FCHELMAVSGHPAHMF---LLSMPSPGPDGQNVRDHVGSFLEMMHSEDRESKR 710
            ++       E++     P  +    LL++   G   +  R+     L     +D  +  
Sbjct: 271 DFNRAAEIFDEMLRNGVQPDRITFNSLLAVCGRGGLWEAARNLFSEMLYRGIEQDIFTYN 330

Query: 711 GLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAV 746
            L+DAV     K G  + A  +     +K++ P+ V
Sbjct: 331 TLLDAVC----KGGQMDLAFQIMSEMPRKHIMPNVV 362


>gi|302782654|ref|XP_002973100.1| hypothetical protein SELMODRAFT_442013 [Selaginella moellendorffii]
 gi|300158853|gb|EFJ25474.1| hypothetical protein SELMODRAFT_442013 [Selaginella moellendorffii]
          Length = 674

 Score =  196 bits (499), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 156/609 (25%), Positives = 260/609 (42%), Gaps = 65/609 (10%)

Query: 294 TGNVVESVSRILRQWKWGPL----------------AEEALGNTNYSMDAYQANQVLKQL 337
           TG    S   I R  KW P                  E AL + + S+ A     VL  +
Sbjct: 60  TGESSASAKTIPRYTKWTPQFARVDEVLKILQKTGNVEAALESWDKSLSAKNIVTVLNNI 119

Query: 338 QDHTVALGFFNWLR-RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVV 396
                AL FF WL+ R   ++ + +TY  M+ IL   RQ     KL+++M   G QP+  
Sbjct: 120 NRWEKALAFFEWLKARPELYEINRYTYNVMLKILRNGRQLELSEKLVEEMTGRGIQPDNY 179

Query: 397 TYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKM 456
           T++ LI+   R     EAL  F++M+  G  PD VTY ++ID++ + G ++ A+++Y+K+
Sbjct: 180 TFSTLINCAKRCRQPEEALKWFERMKSEGIVPDEVTYNSVIDMYGRVGRVNEAVELYEKL 239

Query: 457 QAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNY 516
           ++     DT TY  I N   +AG  Q+  QL  EM + G  PN V  N ++   +KA   
Sbjct: 240 KSVNWKLDTVTYGAIANVYARAGDYQSIIQLVQEMRDSGSSPNAVIMNTLMGTLSKAGKV 299

Query: 517 QSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLL 576
             A K++ +M+ +G  P  VT SI++E+    G  D+A  V+  ++ + W  D  VY  L
Sbjct: 300 NQAKKVFNEMRTSGVSPTPVTLSILVEMYTRVGAYDQAFEVYETLKTEGWKCDVAVYNSL 359

Query: 577 VDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGL 636
           +    + G V +A +  + M +AG  P+  T  + ++ +   G +  A  +   ++ L  
Sbjct: 360 MKACVEGGRVEQAEDILKEMKRAGCNPDHLTYRTAMNTYATKGMVDPARRMFDKVVALNG 419

Query: 637 KPSLQTYTLLLSCCT------EARSPYD----MGFCHELMAVSGHPAHMFLLSMPSPGPD 686
           KP    +T+++  C       +A   +D     G C     VSG    M L  M     D
Sbjct: 420 KPDTPLFTVMIRACKLAGEIEQASKIFDEMMESGCCSPDERVSG----MLLSCMAMAKND 475

Query: 687 GQNV----------------------------RDHVGSFLEMMHSE--DRESKRGLVDAV 716
            + +                            RD V   +E   S+  + +S++ L + +
Sbjct: 476 DERLAILDCLDKFNAPLHELMSAIVRKEEPRSRDEVAEMVEKFISDYPETDSRKPLCNCL 535

Query: 717 VDFLHKSGLKEEAGSVWEVAAQKNVYPDAVKEKGMSYWLINLHVMSDGTAVIALSRTLAW 776
           +D     G+K  A  ++ +      Y D ++    S W +NL  +S   A  A+   ++ 
Sbjct: 536 IDICSSVGMKHAAHKIFAMGVAVGAY-DGLQTNLPSLWRLNLRTLSMPAAECAIEAWVSS 594

Query: 777 FRKQMLISGVGPSRIDIVTGWGRRSRVTGTSLVRQAVQELLHMFSFPFFTENGNSGCFVG 836
            +  +      P  + I TG G   RV     +   V  LL     PF      +G +  
Sbjct: 595 LKAAVREGDELPEDLIIETGVG---RVRSGQRLNPIVGTLLKKLGAPFTENTEPAGYYCS 651

Query: 837 CGEPLNKWL 845
            G  +  W+
Sbjct: 652 TGAAVEAWI 660


>gi|168054024|ref|XP_001779433.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162669118|gb|EDQ55711.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 570

 Score =  196 bits (498), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 149/560 (26%), Positives = 250/560 (44%), Gaps = 35/560 (6%)

Query: 324 SMDAYQANQVLKQLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLL 383
           S D Y    +L  L+    AL  F WLR +     + +TY  M+ +L R RQ+    ++ 
Sbjct: 7   SFDPYDVVAILNSLKSWRQALLLFRWLRAEHSSSLNIYTYNVMLKVLRRGRQWEFSQQIA 66

Query: 384 DQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKA 443
           + M     +P+ +TY+ LI    R NY + A+  F +M   GC PD VTY T+ID++ K 
Sbjct: 67  EDMANADVRPDNITYSTLISCANRCNYQDAAMAWFDRMHEAGCVPDVVTYSTMIDVYGKM 126

Query: 444 GFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTY 503
           G  D A+ +Y++++ AG  PD  TY  ++   G+AG+++AA  +F EM   G  P+ + Y
Sbjct: 127 GKYDEAIALYERVKQAGWKPDKVTYGTMVRLFGRAGYIRAAVSIFEEMKGSGVQPDAIVY 186

Query: 504 NIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRR 563
           NIMIA   +A     ALK++ +M+  G +P+ VT S VME    CG + E   VF  + R
Sbjct: 187 NIMIACLGRAGRMGHALKVFEEMEREGVKPNAVTLSTVMETYSRCGNVMEGLEVFQRL-R 245

Query: 564 KNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSD 623
           +    D  VY  ++ +  +AG   +A ++   M ++G +PN  T  +++S + + G   +
Sbjct: 246 QGVACDVIVYNAVLKMCREAGLASEAEQYLREMTESGHQPNDWTYRNMISVYAKKGMAVE 305

Query: 624 AYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMG-FCHELMAVSGHPAHMF------ 676
           A+     M+  G +  +  YT LL     A+    +     E+ +V+  P          
Sbjct: 306 AHRTFSQMVEAGYQIDVMAYTSLLQAYGNAKEYNKVQEILDEMTSVNCAPDERLCCVILN 365

Query: 677 ----------------LLSMPSPGPD---GQ------NVRDHVGSFLEMMHSEDRESKRG 711
                            L M S   D   GQ       +R+  G    ++     E+ + 
Sbjct: 366 LLDSCDTDEELGILRSCLRMCSSTMDTIVGQIFEENLVLRELRGELQSLLSDITEEAHKP 425

Query: 712 LVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAVKEKGMSYWLINLHVMSDGTAVIALS 771
           + ++++      G +  +  +  +     VY   ++ K  + W ++L  +S G A  AL 
Sbjct: 426 ICNSLMQLSWHKGDRNHSFQLLSLFRVLGVYT-GLQTKSPTMWSLHLRSLSTGAAHCALL 484

Query: 772 RTLAWFRKQMLISGVGPSRIDIVTGWGRRSRVTGTSLVRQAVQELLHMFSFPFFTENGNS 831
             L+  R  +      P RI I TG G +       L+   +  LL   S PF       
Sbjct: 485 SWLSSVRYAIKEGQELPGRIIIETGVGNQLNADEFRLI-VVISSLLKECSSPFKECADRK 543

Query: 832 GCFVGCGEPLNKWLLQSYVD 851
                 G  + +WL  + +D
Sbjct: 544 DWLEASGVDVTQWLESTSLD 563


>gi|225429339|ref|XP_002269471.1| PREDICTED: pentatricopeptide repeat-containing protein At5g02860
           [Vitis vinifera]
          Length = 811

 Score =  192 bits (489), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 97/296 (32%), Positives = 165/296 (55%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           + AG   D +TY T++    R   +     +L +M   G  P+ VTYN L+  YG++   
Sbjct: 263 KSAGIAPDSYTYNTLISCCRRGNLYEEAAGVLKEMKLAGFSPDKVTYNALLDVYGKSRRS 322

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
            EA++V ++M+  GC P  VTY +LI  +A+ G L+ A+++  +M   G+ PD FTY+ +
Sbjct: 323 KEAMEVLQEMEGNGCPPSIVTYNSLISAYARDGLLEDALELKNQMVEKGIKPDVFTYTTL 382

Query: 472 INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF 531
           ++   KAG  +AA Q+F EM N+GC PN+ T+N +I +      +   +K++ D++    
Sbjct: 383 LSGFEKAGKDKAAVQIFEEMRNEGCKPNICTFNALIKMHGNRGKFTEMMKVFEDIKTFQC 442

Query: 532 EPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWE 591
            PD VT++ ++ V G  G   E   VF EM+R  +VP+   +  L+  + + G+  +A  
Sbjct: 443 SPDIVTWNTLLSVFGQNGMDSEVSGVFKEMKRAGFVPERDTFNTLISSYSRCGSFDQAMA 502

Query: 592 WYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
            Y+ ML+AG+ P++ + N++L+A  R G    +  +L  M +   KP+  TY  LL
Sbjct: 503 VYKRMLEAGVNPDLSSYNAVLAALARGGLWKQSEKVLAEMKDGRCKPNELTYCSLL 558



 Score =  152 bits (385), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 86/313 (27%), Positives = 162/313 (51%), Gaps = 2/313 (0%)

Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLI 402
           A+  F  +R + G K +  T+  ++ + G   +F  + K+ + +    C P++VT+N L+
Sbjct: 395 AVQIFEEMRNE-GCKPNICTFNALIKMHGNRGKFTEMMKVFEDIKTFQCSPDIVTWNTLL 453

Query: 403 HSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLS 462
             +G+    +E   VFK+M+  G  P+R T+ TLI  +++ G  D AM +YK+M  AG++
Sbjct: 454 SVFGQNGMDSEVSGVFKEMKRAGFVPERDTFNTLISSYSRCGSFDQAMAVYKRMLEAGVN 513

Query: 463 PDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKL 522
           PD  +Y+ ++  L + G  + + ++  EM +  C PN +TY  ++   A  +  +    L
Sbjct: 514 PDLSSYNAVLAALARGGLWKQSEKVLAEMKDGRCKPNELTYCSLLHAYANGKEIERMCAL 573

Query: 523 YRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGK 582
             ++ +   EP  V    ++ V   C  L E E  F E+R++ + PD      +V ++G+
Sbjct: 574 AEEIYSGIIEPRAVLLKTLVLVNSKCDLLMETERAFLELRQRGFSPDITTLNAMVSIYGR 633

Query: 583 AGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQT 642
              V KA E  + M + G  P++ T NSL+  + R      +  +L+ +L  G++P + +
Sbjct: 634 RQMVAKANEILDCMKRGGFTPSLTTYNSLMYMYSRSANFERSEEILREILAKGIRPDIIS 693

Query: 643 Y-TLLLSCCTEAR 654
           Y T++ + C   R
Sbjct: 694 YNTVIYAYCRNGR 706



 Score =  152 bits (384), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 90/344 (26%), Positives = 178/344 (51%), Gaps = 8/344 (2%)

Query: 313 LAEEALGNTNYSMDAYQAN--QVLKQL---QDHTVALGFFNWLR--RQAGFKHDEHTYTT 365
           L E+  G +++S+++   +   ++K L   +    AL  F W+R  +++    +      
Sbjct: 111 LFEQQPGESDFSVESLSLDVLGIVKGLGFYKKCDTALRVFEWVRNRKESELLLNGSIIAV 170

Query: 366 MVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVG 425
           ++ ILG+  +  A   LL  + +DG   +V  Y  +I ++       EA+ VFK+M+ VG
Sbjct: 171 IISILGKGGRVSAAASLLHNLCKDGFDVDVYAYTSMITAFTSNGRYREAVMVFKKMEEVG 230

Query: 426 CEPDRVTYCTLIDIHAKAGF-LDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAA 484
           C+P  +TY  +++++ K G   +  + +  +M++AG++PD++TY+ +I+C  +    + A
Sbjct: 231 CKPTLITYNVILNVYGKMGMPWNKMVGLVDRMKSAGIAPDSYTYNTLISCCRRGNLYEEA 290

Query: 485 HQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEV 544
             +  EM   G  P+ VTYN ++ +  K+R  + A+++ ++M+  G  P  VTY+ ++  
Sbjct: 291 AGVLKEMKLAGFSPDKVTYNALLDVYGKSRRSKEAMEVLQEMEGNGCPPSIVTYNSLISA 350

Query: 545 LGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPN 604
               G L++A  +  +M  K   PD   Y  L+  + KAG  + A + +E M   G +PN
Sbjct: 351 YARDGLLEDALELKNQMVEKGIKPDVFTYTTLLSGFEKAGKDKAAVQIFEEMRNEGCKPN 410

Query: 605 VPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
           + T N+L+      G+ ++   + + +      P + T+  LLS
Sbjct: 411 ICTFNALIKMHGNRGKFTEMMKVFEDIKTFQCSPDIVTWNTLLS 454



 Score =  139 bits (351), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 82/302 (27%), Positives = 155/302 (51%), Gaps = 3/302 (0%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           + AGF  D+ TY  ++ + G++R+     ++L +M  +GC P++VTYN LI +Y R   L
Sbjct: 298 KLAGFSPDKVTYNALLDVYGKSRRSKEAMEVLQEMEGNGCPPSIVTYNSLISAYARDGLL 357

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
            +AL++  QM   G +PD  TY TL+    KAG    A+ ++++M+  G  P+  T++ +
Sbjct: 358 EDALELKNQMVEKGIKPDVFTYTTLLSGFEKAGKDKAAVQIFEEMRNEGCKPNICTFNAL 417

Query: 472 INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF 531
           I   G  G      ++F ++    C P++VT+N ++++  +         ++++M+ AGF
Sbjct: 418 IKMHGNRGKFTEMMKVFEDIKTFQCSPDIVTWNTLLSVFGQNGMDSEVSGVFKEMKRAGF 477

Query: 532 EPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWE 591
            P++ T++ ++     CG  D+A AV+  M      PD   Y  ++    + G  +++ +
Sbjct: 478 VPERDTFNTLISSYSRCGSFDQAMAVYKRMLEAGVNPDLSSYNAVLAALARGGLWKQSEK 537

Query: 592 WYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPS---LQTYTLLLS 648
               M     +PN  T  SLL A+    ++     L + + +  ++P    L+T  L+ S
Sbjct: 538 VLAEMKDGRCKPNELTYCSLLHAYANGKEIERMCALAEEIYSGIIEPRAVLLKTLVLVNS 597

Query: 649 CC 650
            C
Sbjct: 598 KC 599



 Score =  113 bits (282), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 64/290 (22%), Positives = 135/290 (46%)

Query: 359 DEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVF 418
           D  T+ T++ + G+      ++ +  +M R G  P   T+N LI SY R    ++A+ V+
Sbjct: 445 DIVTWNTLLSVFGQNGMDSEVSGVFKEMKRAGFVPERDTFNTLISSYSRCGSFDQAMAVY 504

Query: 419 KQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKA 478
           K+M   G  PD  +Y  ++   A+ G    +  +  +M+     P+  TY  +++     
Sbjct: 505 KRMLEAGVNPDLSSYNAVLAALARGGLWKQSEKVLAEMKDGRCKPNELTYCSLLHAYANG 564

Query: 479 GHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTY 538
             ++    L  E+ +    P  V    ++ + +K        + + +++  GF PD  T 
Sbjct: 565 KEIERMCALAEEIYSGIIEPRAVLLKTLVLVNSKCDLLMETERAFLELRQRGFSPDITTL 624

Query: 539 SIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQ 598
           + ++ + G    + +A  +   M+R  + P    Y  L+ ++ ++ N  ++ E    +L 
Sbjct: 625 NAMVSIYGRRQMVAKANEILDCMKRGGFTPSLTTYNSLMYMYSRSANFERSEEILREILA 684

Query: 599 AGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
            G+RP++ + N+++ A+ R G++ DA  +L  M   G  P + TY   ++
Sbjct: 685 KGIRPDIISYNTVIYAYCRNGRMRDASRVLSEMRESGPAPDIITYNTFIA 734



 Score =  110 bits (276), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 64/299 (21%), Positives = 138/299 (46%), Gaps = 1/299 (0%)

Query: 345 GFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHS 404
           G F  ++R AGF  +  T+ T++    R   F     +  +M+  G  P++ +YN ++ +
Sbjct: 467 GVFKEMKR-AGFVPERDTFNTLISSYSRCGSFDQAMAVYKRMLEAGVNPDLSSYNAVLAA 525

Query: 405 YGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPD 464
             R     ++  V  +M+   C+P+ +TYC+L+  +A    ++    + +++ +  + P 
Sbjct: 526 LARGGLWKQSEKVLAEMKDGRCKPNELTYCSLLHAYANGKEIERMCALAEEIYSGIIEPR 585

Query: 465 TFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYR 524
                 ++    K   L    + F E+  +G  P++ T N M+++  + +    A ++  
Sbjct: 586 AVLLKTLVLVNSKCDLLMETERAFLELRQRGFSPDITTLNAMVSIYGRRQMVAKANEILD 645

Query: 525 DMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAG 584
            M+  GF P   TY+ +M +       + +E +  E+  K   PD   Y  ++  + + G
Sbjct: 646 CMKRGGFTPSLTTYNSLMYMYSRSANFERSEEILREILAKGIRPDIISYNTVIYAYCRNG 705

Query: 585 NVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTY 643
            +R A      M ++G  P++ T N+ ++++       +A  ++  M+  G KP+  TY
Sbjct: 706 RMRDASRVLSEMRESGPAPDIITYNTFIASYAADSMFVEAIDVVCYMIKHGCKPNQSTY 764



 Score = 45.1 bits (105), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 68/313 (21%), Positives = 118/313 (37%), Gaps = 34/313 (10%)

Query: 532 EPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEP---------VYGLLVDLWGK 582
           E D    S+ ++VLG    L   +     +R   WV +           +  +++ + GK
Sbjct: 118 ESDFSVESLSLDVLGIVKGLGFYKKCDTALRVFEWVRNRKESELLLNGSIIAVIISILGK 177

Query: 583 AGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQT 642
            G V  A      + + G   +V    S+++AF   G+  +A  + + M  +G KP+L T
Sbjct: 178 GGRVSAAASLLHNLCKDGFDVDVYAYTSMITAFTSNGRYREAVMVFKKMEEVGCKPTLIT 237

Query: 643 YTLLLSCCTEARSPYD--MGFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEM 700
           Y ++L+   +   P++  +G    + +    P      ++ S    G N+ +     L+ 
Sbjct: 238 YNVILNVYGKMGMPWNKMVGLVDRMKSAGIAPDSYTYNTLISCCRRG-NLYEEAAGVLKE 296

Query: 701 MHSEDRESKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAVKEKGMSYWLINLHV 760
           M        +   +A++D   KS   +EA  V +        P  V        LI+ + 
Sbjct: 297 MKLAGFSPDKVTYNALLDVYGKSRRSKEAMEVLQEMEGNGCPPSIVTYNS----LISAYA 352

Query: 761 MSDGTAVIALSRTLAWFRKQMLISGVGPSRIDIVTGWGRRSRVTGTSLVRQAVQELLHMF 820
             DG    AL       + QM+  G+ P   D+ T     S        + AVQ      
Sbjct: 353 -RDGLLEDALE-----LKNQMVEKGIKP---DVFTYTTLLSGFEKAGKDKAAVQ------ 397

Query: 821 SFPFFTENGNSGC 833
               F E  N GC
Sbjct: 398 ---IFEEMRNEGC 407


>gi|302784330|ref|XP_002973937.1| hypothetical protein SELMODRAFT_100758 [Selaginella moellendorffii]
 gi|300158269|gb|EFJ24892.1| hypothetical protein SELMODRAFT_100758 [Selaginella moellendorffii]
          Length = 823

 Score =  191 bits (486), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 119/413 (28%), Positives = 202/413 (48%), Gaps = 19/413 (4%)

Query: 348 NWLRRQAGFKH--------DEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYN 399
           +W R Q+ F+         D++TY TM+    +        +L  +M   GC PN VTYN
Sbjct: 264 SWDRIQSLFQEMKDLEISPDDYTYNTMITACIQNSHCQEALRLFQEMKEAGCCPNRVTYN 323

Query: 400 RLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAA 459
            L+  YG+     EA ++  +M+  G  P+ VTY  LI  +A+AG  D A  + K + + 
Sbjct: 324 ALLDVYGKGGMHKEASELLVEMEAAGISPNIVTYNELIAAYARAGLCDEAAALKKSLLSK 383

Query: 460 GLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSA 519
           GL PD FTY  +I+   +A   + A + F EM    C PN+VTYNI+I +  +       
Sbjct: 384 GLCPDEFTYCTLISAFNRAERYEKALETFTEMRKTNCTPNIVTYNILIDIYGRMEKLDDM 443

Query: 520 LKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDL 579
           +K+++ MQ     PD VT++ +++  G+CG L E   VF EM+R  ++P    + +L++ 
Sbjct: 444 MKVFKFMQEKNCTPDLVTWNSLLKSFGNCGMLTEVSNVFREMKRAGYMPGVDTFNILIEC 503

Query: 580 WGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPS 639
           +G+ G V  + + Y+ +L+ GL+P VPT  +L+++  R G+      + Q M   GL+ S
Sbjct: 504 YGRCGYVDYSVDIYKGLLRTGLQPTVPTFAALMASLAREGRWQQCEKVSQEMAEAGLQLS 563

Query: 640 LQTYTLLLSCCTEARSPYDM-GFCHEL-----MAVSGHPAHMFLLSMPSPGPDGQNVRDH 693
              +  L+     +   + +  +  EL       +SG     F+L+    G D +  +  
Sbjct: 564 DACHAGLIHSYANSGQFFQLRKYIDELEKSAKQPLSGILCKTFVLAYCKCGMDNE-AQLA 622

Query: 694 VGSFLEMMHSEDRESKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAV 746
           +    +  HS D +    + +A++    K G  E A  + E   +  + PD V
Sbjct: 623 LNQLYDNGHSPDIK----VFNAMISMCAKRGWIERAVKLLEEIRKAQLKPDGV 671



 Score =  172 bits (437), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 102/361 (28%), Positives = 180/361 (49%), Gaps = 7/361 (1%)

Query: 296 NVVESVSRILRQWKWGP---LAEEALGNTNYSMDAYQANQVLKQLQDHT---VALGFFNW 349
            +V  V  + RQ KW     + E    +  + +       +L  L +H     AL  F  
Sbjct: 143 ELVYFVKALGRQGKWKKALEVFEWIRKHDCFKLRGVATASILSVLGNHEQLPAALELFES 202

Query: 350 LRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYG-RA 408
           L++   +  D + YT+++ IL RAR+F     L + M R+G + N VTYN ++  YG R 
Sbjct: 203 LKQDESYSLDVYAYTSLISILSRARRFDEGITLFETMQREGQRGNAVTYNVMLDLYGKRG 262

Query: 409 NYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTY 468
           +  +    +F++M+ +   PD  TY T+I    +      A+ ++++M+ AG  P+  TY
Sbjct: 263 DSWDRIQSLFQEMKDLEISPDDYTYNTMITACIQNSHCQEALRLFQEMKEAGCCPNRVTY 322

Query: 469 SVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQN 528
           + +++  GK G  + A +L  EM   G  PN+VTYN +IA  A+A     A  L + + +
Sbjct: 323 NALLDVYGKGGMHKEASELLVEMEAAGISPNIVTYNELIAAYARAGLCDEAAALKKSLLS 382

Query: 529 AGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRK 588
            G  PD+ TY  ++         ++A   F EMR+ N  P+   Y +L+D++G+   +  
Sbjct: 383 KGLCPDEFTYCTLISAFNRAERYEKALETFTEMRKTNCTPNIVTYNILIDIYGRMEKLDD 442

Query: 589 AWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
             + ++ M +    P++ T NSLL +F   G L++  ++ + M   G  P + T+ +L+ 
Sbjct: 443 MMKVFKFMQEKNCTPDLVTWNSLLKSFGNCGMLTEVSNVFREMKRAGYMPGVDTFNILIE 502

Query: 649 C 649
           C
Sbjct: 503 C 503



 Score =  112 bits (281), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 82/334 (24%), Positives = 152/334 (45%), Gaps = 36/334 (10%)

Query: 359 DEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVF 418
           D  T+ +++   G       ++ +  +M R G  P V T+N LI  YGR  Y++ ++D++
Sbjct: 458 DLVTWNSLLKSFGNCGMLTEVSNVFREMKRAGYMPGVDTFNILIECYGRCGYVDYSVDIY 517

Query: 419 KQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKA 478
           K +   G +P   T+  L+   A+ G       + ++M  AGL      ++ +I+    +
Sbjct: 518 KGLLRTGLQPTVPTFAALMASLAREGRWQQCEKVSQEMAEAGLQLSDACHAGLIHSYANS 577

Query: 479 GHL-----------QAAHQ----LFC---------------------EMVNQGCIPNLVT 502
           G             ++A Q    + C                     ++ + G  P++  
Sbjct: 578 GQFFQLRKYIDELEKSAKQPLSGILCKTFVLAYCKCGMDNEAQLALNQLYDNGHSPDIKV 637

Query: 503 YNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMR 562
           +N MI++ AK    + A+KL  +++ A  +PD VTY+ +M + G  G   +AE V +EMR
Sbjct: 638 FNAMISMCAKRGWIERAVKLLEEIRKAQLKPDGVTYNCLMSMYGREGMYYKAEEVMSEMR 697

Query: 563 RKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLS 622
           R    P+   Y  L+  + K G +  A   +  M+ A +RP+  T N+L+ ++  +G   
Sbjct: 698 RAGKAPNLITYNTLLYSYTKHGRMDDAARVFGDMVAARVRPDNFTFNTLVGSYSSLGLYK 757

Query: 623 DAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSP 656
           +A  +++ M   G +P+  T+  LL       SP
Sbjct: 758 EALSVIEYMTEHGCQPTQITFKALLDGYNRNASP 791


>gi|297839813|ref|XP_002887788.1| EMB2217 [Arabidopsis lyrata subsp. lyrata]
 gi|297333629|gb|EFH64047.1| EMB2217 [Arabidopsis lyrata subsp. lyrata]
          Length = 832

 Score =  191 bits (484), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 124/440 (28%), Positives = 219/440 (49%), Gaps = 3/440 (0%)

Query: 359 DEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVF 418
           D  TY  ++  L ++ +  A  KL  QM     +P+   ++ L+ S G+A  L+ ++ V+
Sbjct: 308 DGSTYELIIPSLAKSGRLDAAFKLFQQMKERKLRPSFSVFSSLVDSMGKAGRLDTSMKVY 367

Query: 419 KQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKA 478
            +MQ  G  P    + +LID +AKAG LD A+ ++ +M+ +G  P+   Y++II    K+
Sbjct: 368 MEMQGFGHRPSATMFVSLIDSYAKAGKLDTALRLWDEMKKSGFRPNFGLYTMIIESHAKS 427

Query: 479 GHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTY 538
           G L+ A  +F +M   G +P   TY+ ++ + A +    SA+K+Y  M NAG  P   +Y
Sbjct: 428 GKLEVAMSVFKDMEKAGFLPTPSTYSCLLEMHAGSGQVDSAMKIYNSMTNAGLRPGLSSY 487

Query: 539 SIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQ 598
             ++ +L +   +D A  +  EM+   +  D     +L+ ++ K  +V  A +W   M  
Sbjct: 488 ISLLTLLANKRLVDVAGKILLEMKAMGYSVDVCASDVLM-IYIKDASVDLALKWLRFMGS 546

Query: 599 AGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYD 658
           +G++ N      L  + ++ G    A  LL+ +++   K  L  YT +L+     +    
Sbjct: 547 SGIKTNNFIIRQLFESCMKNGLYDSARPLLETLVHSAGKVDLVLYTSILAHLVRCQDEDK 606

Query: 659 MGFCHELMAVSGHPAHMFLLSM-PSPGPDGQNVRDHVGSFLEMMHSEDRE-SKRGLVDAV 716
                 +++ + H AH F+  +   P    Q V   V  F + +  E  E + R  V+ +
Sbjct: 607 ERQLMSILSATKHKAHAFMCGLFTGPEQRKQPVLTFVREFYQGIDYELEEGAARYFVNVL 666

Query: 717 VDFLHKSGLKEEAGSVWEVAAQKNVYPDAVKEKGMSYWLINLHVMSDGTAVIALSRTLAW 776
           +++L   G    A  VW+VA +  ++P A+       W +++  +S G A+IA+  TL  
Sbjct: 667 LNYLVLMGQINRARCVWKVAYENKLFPKAIVFDQHIAWSLDVRNLSVGAALIAVVHTLHR 726

Query: 777 FRKQMLISGVGPSRIDIVTG 796
           FRK+ML  GV P RI +VTG
Sbjct: 727 FRKRMLYYGVVPRRIKLVTG 746



 Score =  169 bits (429), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 98/363 (26%), Positives = 172/363 (47%), Gaps = 3/363 (0%)

Query: 295 GNVVESVSRILRQWKWGPLAEEALGNTNYSMDAYQANQVLKQLQDHTVALGFFNWLRRQA 354
            + V  +  ++++WKWGP  E  L    +  +     Q LK +++   AL  F W ++Q 
Sbjct: 136 ASAVAKIVEVVQRWKWGPELETQLDKLQFVPNMVHITQSLKIVKEVDAALSLFRWAKKQP 195

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVT---YNRLIHSYGRANYL 411
            +   +  Y  +   L + R F  I  L ++MV+D      ++   YN++I    +A  L
Sbjct: 196 WYLPSDECYVVLFDGLNQGRDFVGIQSLFEEMVQDSSSHGDLSFGAYNQVIQYLAKAEKL 255

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
             A   FK+ Q  GC+ D  TY  L+ +    G    A ++Y+ M+      D  TY +I
Sbjct: 256 EVAFCCFKKAQESGCKIDTQTYNNLMMLFLNKGLPYKAFEIYESMEKTDSLLDGSTYELI 315

Query: 472 INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF 531
           I  L K+G L AA +LF +M  +   P+   ++ ++    KA    +++K+Y +MQ  G 
Sbjct: 316 IPSLAKSGRLDAAFKLFQQMKERKLRPSFSVFSSLVDSMGKAGRLDTSMKVYMEMQGFGH 375

Query: 532 EPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWE 591
            P    +  +++     G LD A  ++ EM++  + P+  +Y ++++   K+G +  A  
Sbjct: 376 RPSATMFVSLIDSYAKAGKLDTALRLWDEMKKSGFRPNFGLYTMIIESHAKSGKLEVAMS 435

Query: 592 WYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCT 651
            ++ M +AG  P   T + LL      GQ+  A  +   M N GL+P L +Y  LL+   
Sbjct: 436 VFKDMEKAGFLPTPSTYSCLLEMHAGSGQVDSAMKIYNSMTNAGLRPGLSSYISLLTLLA 495

Query: 652 EAR 654
             R
Sbjct: 496 NKR 498



 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 52/231 (22%), Positives = 90/231 (38%), Gaps = 38/231 (16%)

Query: 355 GFKH--DEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
           GF H      + +++    +A +     +L D+M + G +PN   Y  +I S+ ++  L 
Sbjct: 372 GFGHRPSATMFVSLIDSYAKAGKLDTALRLWDEMKKSGFRPNFGLYTMIIESHAKSGKLE 431

Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYK------------------ 454
            A+ VFK M+  G  P   TY  L+++HA +G +D AM +Y                   
Sbjct: 432 VAMSVFKDMEKAGFLPTPSTYSCLLEMHAGSGQVDSAMKIYNSMTNAGLRPGLSSYISLL 491

Query: 455 -----------------KMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCI 497
                            +M+A G S D     V++  + K   +  A +    M + G  
Sbjct: 492 TLLANKRLVDVAGKILLEMKAMGYSVDVCASDVLMIYI-KDASVDLALKWLRFMGSSGIK 550

Query: 498 PNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHC 548
            N      +     K   Y SA  L   + ++  + D V Y+ ++  L  C
Sbjct: 551 TNNFIIRQLFESCMKNGLYDSARPLLETLVHSAGKVDLVLYTSILAHLVRC 601


>gi|15219388|ref|NP_178067.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75200795|sp|Q9SAK0.1|PP132_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g79490, mitochondrial; AltName: Full=Protein EMBRYO
           DEFECTIVE 2217; Flags: Precursor
 gi|4835759|gb|AAD30226.1|AC007202_8 T8K14.9 [Arabidopsis thaliana]
 gi|332198129|gb|AEE36250.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 836

 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 124/440 (28%), Positives = 219/440 (49%), Gaps = 3/440 (0%)

Query: 359 DEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVF 418
           D  TY  ++  L ++ +  A  KL  QM     +P+   ++ L+ S G+A  L+ ++ V+
Sbjct: 312 DGSTYELIIPSLAKSGRLDAAFKLFQQMKERKLRPSFSVFSSLVDSMGKAGRLDTSMKVY 371

Query: 419 KQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKA 478
            +MQ  G  P    + +LID +AKAG LD A+ ++ +M+ +G  P+   Y++II    K+
Sbjct: 372 MEMQGFGHRPSATMFVSLIDSYAKAGKLDTALRLWDEMKKSGFRPNFGLYTMIIESHAKS 431

Query: 479 GHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTY 538
           G L+ A  +F +M   G +P   TY+ ++ + A +    SA+K+Y  M NAG  P   +Y
Sbjct: 432 GKLEVAMTVFKDMEKAGFLPTPSTYSCLLEMHAGSGQVDSAMKIYNSMTNAGLRPGLSSY 491

Query: 539 SIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQ 598
             ++ +L +   +D A  +  EM+   +  D     +L+ ++ K  +V  A +W   M  
Sbjct: 492 ISLLTLLANKRLVDVAGKILLEMKAMGYSVDVCASDVLM-IYIKDASVDLALKWLRFMGS 550

Query: 599 AGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYD 658
           +G++ N      L  + ++ G    A  LL+ +++   K  L  YT +L+     +    
Sbjct: 551 SGIKTNNFIIRQLFESCMKNGLYDSARPLLETLVHSAGKVDLVLYTSILAHLVRCQDEDK 610

Query: 659 MGFCHELMAVSGHPAHMFLLSM-PSPGPDGQNVRDHVGSFLEMMHSEDRE-SKRGLVDAV 716
                 +++ + H AH F+  +   P    Q V   V  F + +  E  E + R  V+ +
Sbjct: 611 ERQLMSILSATKHKAHAFMCGLFTGPEQRKQPVLTFVREFYQGIDYELEEGAARYFVNVL 670

Query: 717 VDFLHKSGLKEEAGSVWEVAAQKNVYPDAVKEKGMSYWLINLHVMSDGTAVIALSRTLAW 776
           +++L   G    A  VW+VA +  ++P A+       W +++  +S G A+IA+  TL  
Sbjct: 671 LNYLVLMGQINRARCVWKVAYENKLFPKAIVFDQHIAWSLDVRNLSVGAALIAVVHTLHR 730

Query: 777 FRKQMLISGVGPSRIDIVTG 796
           FRK+ML  GV P RI +VTG
Sbjct: 731 FRKRMLYYGVVPRRIKLVTG 750



 Score =  170 bits (430), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 102/366 (27%), Positives = 172/366 (46%), Gaps = 7/366 (1%)

Query: 292 ASTGNVVESVSRILRQWKWGPLAEEALGNTNYSMDAYQANQVLKQLQDHTVALGFFNWLR 351
           +S   +VE V R    WKWGP  E  L    +  +     Q LK +++   AL  F W +
Sbjct: 141 SSVAKIVEVVQR----WKWGPELETQLDKLQFVPNMVHITQSLKIVKEVDAALSLFRWAK 196

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVT---YNRLIHSYGRA 408
           +Q  +   +  Y  +   L + R F  I  L ++MV+D      ++   YN++I    +A
Sbjct: 197 KQPWYLPSDECYVVLFDGLNQGRDFVGIQSLFEEMVQDSSSHGDLSFNAYNQVIQYLAKA 256

Query: 409 NYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTY 468
             L  A   FK+ Q  GC+ D  TY  L+ +    G    A ++Y+ M+      D  TY
Sbjct: 257 EKLEVAFCCFKKAQESGCKIDTQTYNNLMMLFLNKGLPYKAFEIYESMEKTDSLLDGSTY 316

Query: 469 SVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQN 528
            +II  L K+G L AA +LF +M  +   P+   ++ ++    KA    +++K+Y +MQ 
Sbjct: 317 ELIIPSLAKSGRLDAAFKLFQQMKERKLRPSFSVFSSLVDSMGKAGRLDTSMKVYMEMQG 376

Query: 529 AGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRK 588
            G  P    +  +++     G LD A  ++ EM++  + P+  +Y ++++   K+G +  
Sbjct: 377 FGHRPSATMFVSLIDSYAKAGKLDTALRLWDEMKKSGFRPNFGLYTMIIESHAKSGKLEV 436

Query: 589 AWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
           A   ++ M +AG  P   T + LL      GQ+  A  +   M N GL+P L +Y  LL+
Sbjct: 437 AMTVFKDMEKAGFLPTPSTYSCLLEMHAGSGQVDSAMKIYNSMTNAGLRPGLSSYISLLT 496

Query: 649 CCTEAR 654
                R
Sbjct: 497 LLANKR 502



 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 52/231 (22%), Positives = 90/231 (38%), Gaps = 38/231 (16%)

Query: 355 GFKH--DEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
           GF H      + +++    +A +     +L D+M + G +PN   Y  +I S+ ++  L 
Sbjct: 376 GFGHRPSATMFVSLIDSYAKAGKLDTALRLWDEMKKSGFRPNFGLYTMIIESHAKSGKLE 435

Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYK------------------ 454
            A+ VFK M+  G  P   TY  L+++HA +G +D AM +Y                   
Sbjct: 436 VAMTVFKDMEKAGFLPTPSTYSCLLEMHAGSGQVDSAMKIYNSMTNAGLRPGLSSYISLL 495

Query: 455 -----------------KMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCI 497
                            +M+A G S D     V++  + K   +  A +    M + G  
Sbjct: 496 TLLANKRLVDVAGKILLEMKAMGYSVDVCASDVLMIYI-KDASVDLALKWLRFMGSSGIK 554

Query: 498 PNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHC 548
            N      +     K   Y SA  L   + ++  + D V Y+ ++  L  C
Sbjct: 555 TNNFIIRQLFESCMKNGLYDSARPLLETLVHSAGKVDLVLYTSILAHLVRC 605


>gi|255582603|ref|XP_002532083.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223528243|gb|EEF30297.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 841

 Score =  189 bits (481), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 123/440 (27%), Positives = 214/440 (48%), Gaps = 3/440 (0%)

Query: 359 DEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVF 418
           D  TY  M+  L ++ +     KL  +M     +P+   ++ L+ S G++  L+ ++ ++
Sbjct: 322 DASTYELMIPSLAKSGRLDVAFKLFQEMKERKIRPSFGIFSSLVDSMGKSGRLDTSMKIY 381

Query: 419 KQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKA 478
            +MQ  G       Y +LI+ + KAG LD A+ ++ +M+ AG  P+   Y++II    K+
Sbjct: 382 MEMQGFGLRSSASMYVSLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIIESHAKS 441

Query: 479 GHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTY 538
           G L  A  +F +M   G +P   TY+ ++ + A +    SA+KLY  M NAG +P   TY
Sbjct: 442 GKLDIATSIFKDMDKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLKPGLSTY 501

Query: 539 SIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQ 598
           + ++ +L     +D A  +  EM+   +  D     +L+ ++ K G+V  A  W   M  
Sbjct: 502 TALLTLLASKKLVDVAAKILLEMKAMGFSVDVSASDVLM-VYIKDGSVDLALRWLSFMGS 560

Query: 599 AGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYD 658
           +G+R N      L  + ++ G    A  LL+  +N   K  L  YT +L+     +    
Sbjct: 561 SGIRTNNFIIRQLFESCMKKGLYESAKPLLETYVNSAAKVDLILYTSILANLVRCQEEQH 620

Query: 659 MGFCHELMAVSGHPAHMFLLSM-PSPGPDGQNVRDHVGSFLEMMHSEDRE-SKRGLVDAV 716
                 ++  + H AH F+  +   P    Q V   V  F + +  +  E + +  V+ +
Sbjct: 621 ERHLMSILGATRHKAHAFMCGLFTGPEQRQQPVLFFVREFFQGIDYDLEEGAAKYFVNVL 680

Query: 717 VDFLHKSGLKEEAGSVWEVAAQKNVYPDAVKEKGMSYWLINLHVMSDGTAVIALSRTLAW 776
           +++L   G    A  VW+VA +  ++P A+       W +++  +S G A+IA+  TL  
Sbjct: 681 LNYLVLMGQINRARCVWKVAYENKLFPKAIVFDQHIAWSLDVRNLSVGAALIAVVHTLHR 740

Query: 777 FRKQMLISGVGPSRIDIVTG 796
           FRK+ML  GV P RI +VTG
Sbjct: 741 FRKRMLYYGVVPRRIKLVTG 760



 Score =  187 bits (475), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 112/360 (31%), Positives = 172/360 (47%), Gaps = 3/360 (0%)

Query: 298 VESVSRILRQWKWGPLAEEALGNTNYSMDAYQANQVLKQLQDHTVALGFFNWLRRQAGFK 357
           V  +  I+++WKWGP  E  L    +        Q LK + D    L  F W +RQ  + 
Sbjct: 153 VAKIVEIVKRWKWGPELETQLDKLQFVPSMTHVVQALKIINDADGMLSLFKWAKRQTWYV 212

Query: 358 HDEHTYTTMVGILGRARQFGAINKLLDQMVRD---GCQPNVVTYNRLIHSYGRANYLNEA 414
            D+  Y  +   L + R F  I  L D+MV+D   G   +V  YNR+I    +A  L  +
Sbjct: 213 VDDECYALLFDGLNKIRDFDGIQSLFDEMVQDSSKGGISSVYAYNRVIQHLAKAEKLELS 272

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
              FK++Q  GC+ D  TY  LI      G    A ++Y+ MQAA  S D  TY ++I  
Sbjct: 273 FCCFKKVQDSGCKIDTQTYNALITSFLNKGLPYKAFEIYESMQAAQCSLDASTYELMIPS 332

Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPD 534
           L K+G L  A +LF EM  +   P+   ++ ++    K+    +++K+Y +MQ  G    
Sbjct: 333 LAKSGRLDVAFKLFQEMKERKIRPSFGIFSSLVDSMGKSGRLDTSMKIYMEMQGFGLRSS 392

Query: 535 KVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYE 594
              Y  ++E     G LD A  ++ EM++  + P+  +Y L+++   K+G +  A   ++
Sbjct: 393 ASMYVSLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIIESHAKSGKLDIATSIFK 452

Query: 595 AMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEAR 654
            M +AG  P   T + LL      GQ+  A  L   M N GLKP L TYT LL+     +
Sbjct: 453 DMDKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLKPGLSTYTALLTLLASKK 512


>gi|15224671|ref|NP_180698.1| genomes uncoupled 1 protein [Arabidopsis thaliana]
 gi|75206083|sp|Q9SIC9.1|PP178_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At2g31400, chloroplastic; Flags: Precursor
 gi|4589961|gb|AAD26479.1| unknown protein [Arabidopsis thaliana]
 gi|330253448|gb|AEC08542.1| genomes uncoupled 1 protein [Arabidopsis thaliana]
          Length = 918

 Score =  189 bits (480), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 135/542 (24%), Positives = 246/542 (45%), Gaps = 68/542 (12%)

Query: 356 FKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEAL 415
            + D  +Y T++  + +  Q     ++L QM      PNVV+Y+ +I  + +A   +EAL
Sbjct: 370 IEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEAL 429

Query: 416 DVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCL 475
           ++F +M+ +G   DRV+Y TL+ I+ K G  + A+D+ ++M + G+  D  TY+ ++   
Sbjct: 430 NLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGY 489

Query: 476 GKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDK 535
           GK G      ++F EM  +  +PNL+TY+ +I   +K   Y+ A++++R+ ++AG   D 
Sbjct: 490 GKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADV 549

Query: 536 VTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEA 595
           V YS +++ L   G +  A ++  EM ++   P+   Y  ++D +G++  + ++ ++   
Sbjct: 550 VLYSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSIIDAFGRSATMDRSADYSNG 609

Query: 596 MLQAGLRPNVPTCNSLLSAFLRV---------GQLSDA-------------------YHL 627
                   ++P  +S LSA             GQL+                       +
Sbjct: 610 -------GSLPFSSSALSALTETEGNRVIQLFGQLTTESNNRTTKDCEEGMQELSCILEV 662

Query: 628 LQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGFCHELMAVSGHP----AHMFLLSMPSP 683
            + M  L +KP++ T++ +L+ C+   S  D     E + +  +      H  L+     
Sbjct: 663 FRKMHQLEIKPNVVTFSAILNACSRCNSFEDASMLLEELRLFDNKVYGVVHGLLMGQR-- 720

Query: 684 GPDGQNVRDHVGSFLEMMHSEDRESKRGLVDAVVDFLHKSGLKEEAG---------SVWE 734
               +NV     S  + ++  D  +     +A+ D L   G K  A           VWE
Sbjct: 721 ----ENVWLQAQSLFDKVNEMDGSTASAFYNALTDMLWHFGQKRGAELVALEGRSRQVWE 776

Query: 735 VAAQKNVYPDAVKEKGMSYWLINLHVMSDGTAVIALSRTLAWFRKQMLISGVGPSRIDIV 794
                NV+ D+          ++LH+MS G A   +   L   R  +      P  + I+
Sbjct: 777 -----NVWSDSC---------LDLHLMSSGAARAMVHAWLLNIRSIVYEGHELPKVLSIL 822

Query: 795 TGWGRRSRVTGTSLVRQAVQELLHMFSFPFFTENGNSGCFVGCGEPLNKWLLQSYVDRMH 854
           TGWG+ S+V G   +R+AV+ LL     PF     N G F   G  +  WL +S   ++ 
Sbjct: 823 TGWGKHSKVVGDGALRRAVEVLLRGMDAPFHLSKCNMGRFTSSGSVVATWLRESATLKLL 882

Query: 855 LL 856
           +L
Sbjct: 883 IL 884



 Score =  167 bits (424), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 98/330 (29%), Positives = 169/330 (51%), Gaps = 4/330 (1%)

Query: 319 GNTNYSMDAYQANQVLKQLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRA-RQFG 377
           GNT Y+  A  +      L  H  A+  FN ++ + G + +  TY  ++   G+   +F 
Sbjct: 265 GNTVYAFSALISAYGRSGL--HEEAISVFNSMK-EYGLRPNLVTYNAVIDACGKGGMEFK 321

Query: 378 AINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLI 437
            + K  D+M R+G QP+ +T+N L+    R      A ++F +M     E D  +Y TL+
Sbjct: 322 QVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLL 381

Query: 438 DIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCI 497
           D   K G +D+A ++  +M    + P+  +YS +I+   KAG    A  LF EM   G  
Sbjct: 382 DAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIA 441

Query: 498 PNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAV 557
            + V+YN ++++  K    + AL + R+M + G + D VTY+ ++   G  G  DE + V
Sbjct: 442 LDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKV 501

Query: 558 FAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLR 617
           F EM+R++ +P+   Y  L+D + K G  ++A E +     AGLR +V   ++L+ A  +
Sbjct: 502 FTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCK 561

Query: 618 VGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
            G +  A  L+  M   G+ P++ TY  ++
Sbjct: 562 NGLVGSAVSLIDEMTKEGISPNVVTYNSII 591



 Score =  102 bits (253), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 78/313 (24%), Positives = 135/313 (43%), Gaps = 3/313 (0%)

Query: 436 LIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQG 495
           +I    + G + +A  +++   A G     + +S +I+  G++G  + A  +F  M   G
Sbjct: 239 MISTLGRYGKVTIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKEYG 298

Query: 496 CIPNLVTYNIMI-ALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEA 554
             PNLVTYN +I A       ++   K + +MQ  G +PD++T++ ++ V    G  + A
Sbjct: 299 LRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWEAA 358

Query: 555 EAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSA 614
             +F EM  +    D   Y  L+D   K G +  A+E    M    + PNV + ++++  
Sbjct: 359 RNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDG 418

Query: 615 FLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTE-ARSPYDMGFCHELMAVSGHPA 673
           F + G+  +A +L   M  LG+     +Y  LLS  T+  RS   +    E+ +V G   
Sbjct: 419 FAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASV-GIKK 477

Query: 674 HMFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRESKRGLVDAVVDFLHKSGLKEEAGSVW 733
            +   +    G   Q   D V      M  E           ++D   K GL +EA  ++
Sbjct: 478 DVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIF 537

Query: 734 EVAAQKNVYPDAV 746
                  +  D V
Sbjct: 538 REFKSAGLRADVV 550



 Score =  100 bits (248), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 69/274 (25%), Positives = 122/274 (44%), Gaps = 41/274 (14%)

Query: 350 LRRQA--GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGR 407
           LR  A  G K D  TY  ++G  G+  ++  + K+  +M R+   PN++TY+ LI  Y +
Sbjct: 467 LREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSK 526

Query: 408 ANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFT 467
                EA+++F++ +  G   D V Y  LID   K G +  A+ +  +M   G+SP+  T
Sbjct: 527 GGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVT 586

Query: 468 YSVIINCLGKAGHLQAAHQLFCEMVNQGCIP---------NLVTYNIMIAL--------- 509
           Y+ II+  G++  +  +     +  N G +P              N +I L         
Sbjct: 587 YNSIIDAFGRSATMDRS----ADYSNGGSLPFSSSALSALTETEGNRVIQLFGQLTTESN 642

Query: 510 -------QAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMR 562
                  +   +     L+++R M     +P+ VT+S ++     C   ++A  +  E+R
Sbjct: 643 NRTTKDCEEGMQELSCILEVFRKMHQLEIKPNVVTFSAILNACSRCNSFEDASMLLEELR 702

Query: 563 RKNWVPDEPVYGLLVD-LWGKAGNVRKAWEWYEA 595
               + D  VYG++   L G+  NV     W +A
Sbjct: 703 ----LFDNKVYGVVHGLLMGQRENV-----WLQA 727



 Score = 42.4 bits (98), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 52/222 (23%), Positives = 86/222 (38%), Gaps = 17/222 (7%)

Query: 534 DKVTYSIVMEVLGHCGYLDEA----EAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKA 589
           D  TY  ++  LG+    D+A    E      RRKN      +   ++   G+ G V  A
Sbjct: 197 DDCTY--IIRELGNRNECDKAVGFYEFAVKRERRKN--EQGKLASAMISTLGRYGKVTIA 252

Query: 590 WEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSC 649
              +E     G    V   ++L+SA+ R G   +A  +   M   GL+P+L TY  ++  
Sbjct: 253 KRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDA 312

Query: 650 CTEARSPYDM--GFCHELMAVSGHPAHMF---LLSMPSPGPDGQNVRDHVGSFLEMMHSE 704
           C +    +     F  E+      P  +    LL++ S G   +  R+           +
Sbjct: 313 CGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQ 372

Query: 705 DRESKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAV 746
           D  S   L+DA+     K G  + A  +      K + P+ V
Sbjct: 373 DVFSYNTLLDAIC----KGGQMDLAFEILAQMPVKRIMPNVV 410


>gi|357449339|ref|XP_003594946.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|124359380|gb|ABN05846.1| Tetratricopeptide-like helical [Medicago truncatula]
 gi|355483994|gb|AES65197.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 849

 Score =  189 bits (480), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 97/302 (32%), Positives = 159/302 (52%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           R  G + DE T TT++   GR        +  D +  +G +P   TYN ++  +G+A   
Sbjct: 300 RSKGLEFDEFTCTTVISACGREGILDEARRFFDDLKLNGYKPGTATYNSMLQVFGKAGVY 359

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
            EAL++ K+M+   CEPD +TY  L+  + +AGF D    +   M + G+ P+  TY+ +
Sbjct: 360 TEALNILKEMEDNNCEPDAITYNELVAAYVRAGFHDEGAAVIDTMASKGVMPNAITYTTV 419

Query: 472 INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF 531
           IN  GKAG    A ++F +M   GC+PN+ TYN ++ L  K    +  +K+  DM+  G 
Sbjct: 420 INAYGKAGDADKALEVFGQMKELGCVPNVCTYNNVLVLLGKRSRSEDMIKILCDMKLNGC 479

Query: 532 EPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWE 591
            PD++T++ ++ V G  G       V  EM+   + PD+  +  L+  +G+ G+     +
Sbjct: 480 PPDRITWNTMLAVCGEKGKQKFVSQVLREMKNCGFEPDKETFNTLISAYGRCGSEVDVAK 539

Query: 592 WYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCT 651
            Y  M+ AG  P + T N+LL+A  R G    A  ++  M   G KP+  +Y+LLL C +
Sbjct: 540 MYGEMVAAGFTPCITTYNALLNALARRGNWKAAESVVLDMRKKGFKPNETSYSLLLHCYS 599

Query: 652 EA 653
           +A
Sbjct: 600 KA 601



 Score =  155 bits (393), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 92/314 (29%), Positives = 158/314 (50%), Gaps = 4/314 (1%)

Query: 343 ALGFFNWLRRQAG---FKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYN 399
           A   F W+    G    K D+ +   MV +LGR  Q+   +KL D +  +    +V    
Sbjct: 182 AFLLFEWVWLNFGSENMKVDDQSVEFMVKMLGRESQYSIASKLFDIIPVEEYSLDVKACT 241

Query: 400 RLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAG-FLDVAMDMYKKMQA 458
            ++H+Y R      A+++F++M+  G +P  VTY  ++D++ K G    + +++  +M++
Sbjct: 242 TVLHAYARTGKYKRAIEIFEKMKETGLDPTLVTYNVMLDVYGKMGRAWSMILELLDEMRS 301

Query: 459 AGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQS 518
            GL  D FT + +I+  G+ G L  A + F ++   G  P   TYN M+ +  KA  Y  
Sbjct: 302 KGLEFDEFTCTTVISACGREGILDEARRFFDDLKLNGYKPGTATYNSMLQVFGKAGVYTE 361

Query: 519 ALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVD 578
           AL + ++M++   EPD +TY+ ++      G+ DE  AV   M  K  +P+   Y  +++
Sbjct: 362 ALNILKEMEDNNCEPDAITYNELVAAYVRAGFHDEGAAVIDTMASKGVMPNAITYTTVIN 421

Query: 579 LWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKP 638
            +GKAG+  KA E +  M + G  PNV T N++L    +  +  D   +L  M   G  P
Sbjct: 422 AYGKAGDADKALEVFGQMKELGCVPNVCTYNNVLVLLGKRSRSEDMIKILCDMKLNGCPP 481

Query: 639 SLQTYTLLLSCCTE 652
              T+  +L+ C E
Sbjct: 482 DRITWNTMLAVCGE 495



 Score =  123 bits (308), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 80/304 (26%), Positives = 152/304 (50%), Gaps = 13/304 (4%)

Query: 362 TYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQM 421
           TY  ++ +LG+  +   + K+L  M  +GC P+ +T+N ++   G          V ++M
Sbjct: 450 TYNNVLVLLGKRSRSEDMIKILCDMKLNGCPPDRITWNTMLAVCGEKGKQKFVSQVLREM 509

Query: 422 QVVGCEPDRVTYCTLIDIHAKAGF-LDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGH 480
           +  G EPD+ T+ TLI  + + G  +DVA  MY +M AAG +P   TY+ ++N L + G+
Sbjct: 510 KNCGFEPDKETFNTLISAYGRCGSEVDVA-KMYGEMVAAGFTPCITTYNALLNALARRGN 568

Query: 481 LQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSI 540
            +AA  +  +M  +G  PN  +Y++++   +KA N +   K+  ++ +    P  +    
Sbjct: 569 WKAAESVVLDMRKKGFKPNETSYSLLLHCYSKAGNVRGLEKVEMEIYDGHVFPSWMLLRT 628

Query: 541 VMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAG 600
           ++     C  L   E  F +++   +  D  V   ++ ++ +   + KA E  + +  +G
Sbjct: 629 LVLTNYKCRQLKGMERAFHQLQNNGYKLDMVVINSMLSMFVRNQKLEKAHEMLDVIHVSG 688

Query: 601 LRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMG 660
           L+PN+ T NSL+  + RVG    A  +L+ + N G+ P + +Y  ++            G
Sbjct: 689 LQPNLVTYNSLIDLYARVGDCWKAEEMLKDIQNSGISPDVVSYNTVIK-----------G 737

Query: 661 FCHE 664
           FC +
Sbjct: 738 FCKK 741



 Score =  119 bits (299), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 68/291 (23%), Positives = 143/291 (49%)

Query: 359 DEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVF 418
           D  T+ TM+ + G   +   ++++L +M   G +P+  T+N LI +YGR     +   ++
Sbjct: 482 DRITWNTMLAVCGEKGKQKFVSQVLREMKNCGFEPDKETFNTLISAYGRCGSEVDVAKMY 541

Query: 419 KQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKA 478
            +M   G  P   TY  L++  A+ G    A  +   M+  G  P+  +YS++++C  KA
Sbjct: 542 GEMVAAGFTPCITTYNALLNALARRGNWKAAESVVLDMRKKGFKPNETSYSLLLHCYSKA 601

Query: 479 GHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTY 538
           G+++   ++  E+ +    P+ +    ++    K R  +   + +  +QN G++ D V  
Sbjct: 602 GNVRGLEKVEMEIYDGHVFPSWMLLRTLVLTNYKCRQLKGMERAFHQLQNNGYKLDMVVI 661

Query: 539 SIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQ 598
           + ++ +      L++A  +   +      P+   Y  L+DL+ + G+  KA E  + +  
Sbjct: 662 NSMLSMFVRNQKLEKAHEMLDVIHVSGLQPNLVTYNSLIDLYARVGDCWKAEEMLKDIQN 721

Query: 599 AGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSC 649
           +G+ P+V + N+++  F + G + +A  +L  M   G++P   T+   +SC
Sbjct: 722 SGISPDVVSYNTVIKGFCKKGLVQEAIRILSEMTANGVQPCPITFNTFMSC 772



 Score =  105 bits (261), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 77/337 (22%), Positives = 144/337 (42%), Gaps = 35/337 (10%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           +  GF+ D+ T+ T++   GR      + K+  +MV  G  P + TYN L+++  R    
Sbjct: 510 KNCGFEPDKETFNTLISAYGRCGSEVDVAKMYGEMVAAGFTPCITTYNALLNALARRGNW 569

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAG----FLDVAMDMYK------------- 454
             A  V   M+  G +P+  +Y  L+  ++KAG       V M++Y              
Sbjct: 570 KAAESVVLDMRKKGFKPNETSYSLLLHCYSKAGNVRGLEKVEMEIYDGHVFPSWMLLRTL 629

Query: 455 ------------------KMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGC 496
                             ++Q  G   D    + +++   +   L+ AH++   +   G 
Sbjct: 630 VLTNYKCRQLKGMERAFHQLQNNGYKLDMVVINSMLSMFVRNQKLEKAHEMLDVIHVSGL 689

Query: 497 IPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEA 556
            PNLVTYN +I L A+  +   A ++ +D+QN+G  PD V+Y+ V++     G + EA  
Sbjct: 690 QPNLVTYNSLIDLYARVGDCWKAEEMLKDIQNSGISPDVVSYNTVIKGFCKKGLVQEAIR 749

Query: 557 VFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFL 616
           + +EM      P    +   +  +   G   +A E    M++ G  PN  T   ++  ++
Sbjct: 750 ILSEMTANGVQPCPITFNTFMSCYAGNGLFAEADEVIRYMIEHGCMPNELTYKIVIDGYI 809

Query: 617 RVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEA 653
           +  +  +A   +  +  + +    Q+   L SC  E+
Sbjct: 810 KAKKHKEAMDFVSKIKEIDISFDDQSLKKLASCIRES 846



 Score = 97.8 bits (242), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 58/196 (29%), Positives = 97/196 (49%), Gaps = 4/196 (2%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           G+K D     +M+ +  R ++    +++LD +   G QPN+VTYN LI  Y R     +A
Sbjct: 653 GYKLDMVVINSMLSMFVRNQKLEKAHEMLDVIHVSGLQPNLVTYNSLIDLYARVGDCWKA 712

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
            ++ K +Q  G  PD V+Y T+I    K G +  A+ +  +M A G+ P   T++  ++C
Sbjct: 713 EEMLKDIQNSGISPDVVSYNTVIKGFCKKGLVQEAIRILSEMTANGVQPCPITFNTFMSC 772

Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPD 534
               G    A ++   M+  GC+PN +TY I+I    KA+ ++ A+     ++      D
Sbjct: 773 YAGNGLFAEADEVIRYMIEHGCMPNELTYKIVIDGYIKAKKHKEAMDFVSKIKEIDISFD 832

Query: 535 ----KVTYSIVMEVLG 546
               K   S + E LG
Sbjct: 833 DQSLKKLASCIRESLG 848



 Score = 44.7 bits (104), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 40/215 (18%), Positives = 82/215 (38%), Gaps = 1/215 (0%)

Query: 555 EAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSA 614
           E V+     +N   D+     +V + G+      A + ++ +       +V  C ++L A
Sbjct: 187 EWVWLNFGSENMKVDDQSVEFMVKMLGRESQYSIASKLFDIIPVEEYSLDVKACTTVLHA 246

Query: 615 FLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGF-CHELMAVSGHPA 673
           + R G+   A  + + M   GL P+L TY ++L    +    + M     + M   G   
Sbjct: 247 YARTGKYKRAIEIFEKMKETGLDPTLVTYNVMLDVYGKMGRAWSMILELLDEMRSKGLEF 306

Query: 674 HMFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRESKRGLVDAVVDFLHKSGLKEEAGSVW 733
             F  +        + + D    F + +     +      ++++    K+G+  EA ++ 
Sbjct: 307 DEFTCTTVISACGREGILDEARRFFDDLKLNGYKPGTATYNSMLQVFGKAGVYTEALNIL 366

Query: 734 EVAAQKNVYPDAVKEKGMSYWLINLHVMSDGTAVI 768
           +     N  PDA+    +    +      +G AVI
Sbjct: 367 KEMEDNNCEPDAITYNELVAAYVRAGFHDEGAAVI 401


>gi|357139229|ref|XP_003571186.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g16010-like [Brachypodium distachyon]
          Length = 628

 Score =  187 bits (476), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 121/398 (30%), Positives = 199/398 (50%), Gaps = 12/398 (3%)

Query: 283 GLAPFSRHFASTGNVV-ESVSRILRQWKWGPLAEEALGNTNYSMDAYQANQVLKQLQDHT 341
            +AP  R +  +  V+ E   RIL+ +KWGP AE+AL      +D +   +V+K      
Sbjct: 41  AVAPIERRYTRSVRVMDERFIRILKIFKWGPDAEKALEVLMLKVDHWLVREVMKTDVGVN 100

Query: 342 VALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDG-CQPNVVTYNR 400
           V + FF W  ++  ++HD  TY  ++  L    Q+G + K++ +MVR+  C    +  + 
Sbjct: 101 VKMQFFRWAAKKRNYEHDTSTYMALIRCLEVVEQYGEMWKMIQEMVRNPVCVVTPMELSD 160

Query: 401 LIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAG 460
           +I   G A  +++A+ +F Q++V  C+P    Y ++I +    G  +   ++Y +M   G
Sbjct: 161 IIRMLGNAKMISKAVAIFYQIKVRKCQPTAQAYNSMIIMLMHEGQYEKVHELYNEMSNEG 220

Query: 461 -LSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSA 519
              PDT TYS +I+   K G   +A +L  EM + G  P    Y ++IAL  K  N   A
Sbjct: 221 HCFPDTVTYSALISAFCKLGRQDSAIRLLNEMKDNGMQPTAKIYTMLIALFFKLNNVHGA 280

Query: 520 LKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDL 579
           L L+ +M++    PD  TY+ ++  LG  G  DEA   F EMRR+   PD  V   +++ 
Sbjct: 281 LGLFEEMRHQYCRPDVFTYTELIRGLGKAGRFDEAYNFFHEMRREGCRPDTVVINNMINF 340

Query: 580 WGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFL----RVGQLSDAYHLLQGMLNLG 635
            GKAG +  A + +E M      P+V T N+++ A      R+ ++S  +  ++G    G
Sbjct: 341 LGKAGRLDDAVKLFEEMGTLQCIPSVVTYNTIIKALFESKSRISEISSWFERMKGS---G 397

Query: 636 LKPSLQTYTLLLS-CCTEARSPYDMGFCHELMAVSGHP 672
           + PS  TY++L+   C   R+   M    E M   G P
Sbjct: 398 ISPSPFTYSILIDGFCKTNRTEKAMMLLEE-MDEKGFP 434



 Score =  147 bits (371), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 96/343 (27%), Positives = 161/343 (46%), Gaps = 39/343 (11%)

Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLI 402
           ALG F  +R Q   + D  TYT ++  LG+A +F        +M R+GC+P+ V  N +I
Sbjct: 280 ALGLFEEMRHQYC-RPDVFTYTELIRGLGKAGRFDEAYNFFHEMRREGCRPDTVVINNMI 338

Query: 403 HSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLID--IHAKAGFLDVAMDMYKKMQAAG 460
           +  G+A  L++A+ +F++M  + C P  VTY T+I     +K+   +++   +++M+ +G
Sbjct: 339 NFLGKAGRLDDAVKLFEEMGTLQCIPSVVTYNTIIKALFESKSRISEIS-SWFERMKGSG 397

Query: 461 LSPDTFTYSV-----------------------------------IINCLGKAGHLQAAH 485
           +SP  FTYS+                                   +I+ LGKA     AH
Sbjct: 398 ISPSPFTYSILIDGFCKTNRTEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDIAH 457

Query: 486 QLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVL 545
           +LF E+       +   Y +MI    KA     A+ L+ +M   G  P+   Y+ +M  L
Sbjct: 458 ELFQELKENCGSSSARVYAVMIKHLGKAGRLDDAVNLFDEMNKLGCTPNVYAYNALMSGL 517

Query: 546 GHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNV 605
              G LDEA      M+    +PD   Y ++++   K G   +A E    M Q+ ++P+ 
Sbjct: 518 ARAGMLDEALTTMRRMQEHGCIPDINSYNIILNGLAKTGGPHRAMEMLSNMKQSAIKPDA 577

Query: 606 PTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
            + N++L A    G   +A  L++ M  LG +  L TY+ +L 
Sbjct: 578 VSYNTVLGAMSHAGLFEEAAKLMKEMNVLGFEYDLITYSSILE 620



 Score =  146 bits (369), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 99/336 (29%), Positives = 156/336 (46%), Gaps = 38/336 (11%)

Query: 359 DEHTYTTMVGILGR-ARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDV 417
           D  TY+ ++    +  RQ  AI +LL++M  +G QP    Y  LI  + + N ++ AL +
Sbjct: 225 DTVTYSALISAFCKLGRQDSAI-RLLNEMKDNGMQPTAKIYTMLIALFFKLNNVHGALGL 283

Query: 418 FKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGK 477
           F++M+   C PD  TY  LI    KAG  D A + + +M+  G  PDT   + +IN LGK
Sbjct: 284 FEEMRHQYCRPDVFTYTELIRGLGKAGRFDEAYNFFHEMRREGCRPDTVVINNMINFLGK 343

Query: 478 AGHLQAAHQLFCEMVNQGCIPNLVTYNIMIA--LQAKAR--------------------- 514
           AG L  A +LF EM    CIP++VTYN +I    ++K+R                     
Sbjct: 344 AGRLDDAVKLFEEMGTLQCIPSVVTYNTIIKALFESKSRISEISSWFERMKGSGISPSPF 403

Query: 515 -------------NYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEM 561
                          + A+ L  +M   GF P    Y  +++ LG     D A  +F E+
Sbjct: 404 TYSILIDGFCKTNRTEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDIAHELFQEL 463

Query: 562 RRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQL 621
           +         VY +++   GKAG +  A   ++ M + G  PNV   N+L+S   R G L
Sbjct: 464 KENCGSSSARVYAVMIKHLGKAGRLDDAVNLFDEMNKLGCTPNVYAYNALMSGLARAGML 523

Query: 622 SDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPY 657
            +A   ++ M   G  P + +Y ++L+   +   P+
Sbjct: 524 DEALTTMRRMQEHGCIPDINSYNIILNGLAKTGGPH 559



 Score =  116 bits (290), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 87/312 (27%), Positives = 138/312 (44%), Gaps = 37/312 (11%)

Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNR-- 400
           A  FF+ +RR+ G + D      M+  LG+A +     KL ++M    C P+VVTYN   
Sbjct: 315 AYNFFHEMRRE-GCRPDTVVINNMINFLGKAGRLDDAVKLFEEMGTLQCIPSVVTYNTII 373

Query: 401 ----------------------------------LIHSYGRANYLNEALDVFKQMQVVGC 426
                                             LI  + + N   +A+ + ++M   G 
Sbjct: 374 KALFESKSRISEISSWFERMKGSGISPSPFTYSILIDGFCKTNRTEKAMMLLEEMDEKGF 433

Query: 427 EPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQ 486
            P    YC+LID   KA   D+A +++++++    S     Y+V+I  LGKAG L  A  
Sbjct: 434 PPCPAAYCSLIDALGKAKRYDIAHELFQELKENCGSSSARVYAVMIKHLGKAGRLDDAVN 493

Query: 487 LFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLG 546
           LF EM   GC PN+  YN +++  A+A     AL   R MQ  G  PD  +Y+I++  L 
Sbjct: 494 LFDEMNKLGCTPNVYAYNALMSGLARAGMLDEALTTMRRMQEHGCIPDINSYNIILNGLA 553

Query: 547 HCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVP 606
             G    A  + + M++    PD   Y  ++     AG   +A +  + M   G   ++ 
Sbjct: 554 KTGGPHRAMEMLSNMKQSAIKPDAVSYNTVLGAMSHAGLFEEAAKLMKEMNVLGFEYDLI 613

Query: 607 TCNSLLSAFLRV 618
           T +S+L A  +V
Sbjct: 614 TYSSILEAIGKV 625



 Score = 62.8 bits (151), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 31/120 (25%), Positives = 58/120 (48%)

Query: 361 HTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQ 420
           + Y  ++  L RA         + +M   GC P++ +YN +++   +    + A+++   
Sbjct: 508 YAYNALMSGLARAGMLDEALTTMRRMQEHGCIPDINSYNIILNGLAKTGGPHRAMEMLSN 567

Query: 421 MQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGH 480
           M+    +PD V+Y T++   + AG  + A  + K+M   G   D  TYS I+  +GK  H
Sbjct: 568 MKQSAIKPDAVSYNTVLGAMSHAGLFEEAAKLMKEMNVLGFEYDLITYSSILEAIGKVDH 627


>gi|302771417|ref|XP_002969127.1| hypothetical protein SELMODRAFT_61162 [Selaginella moellendorffii]
 gi|300163632|gb|EFJ30243.1| hypothetical protein SELMODRAFT_61162 [Selaginella moellendorffii]
          Length = 646

 Score =  187 bits (476), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 98/300 (32%), Positives = 160/300 (53%), Gaps = 8/300 (2%)

Query: 348 NWLRRQAGFKH--------DEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYN 399
           +W R Q+ F+         D++TY TM+    +        +L  +M   GC PN VTYN
Sbjct: 125 SWDRIQSLFQEMKDLEISPDDYTYNTMITACIQNSHCQEALRLFQEMKEAGCCPNRVTYN 184

Query: 400 RLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAA 459
            L+  YG+     EA ++  +M+  G  P+ VTY  LI  +A+AG  D A  + K + + 
Sbjct: 185 ALLDVYGKGGMHKEASELLVEMEAAGISPNIVTYNELIAAYARAGLCDEAAALKKSLLSK 244

Query: 460 GLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSA 519
           GL PD FTY  +I+   +A   + A + F EM    C PN+VTYNI+I +  +       
Sbjct: 245 GLCPDEFTYCTLISAFNRAERYEKALETFTEMRKTNCTPNIVTYNILIDIYGRMEKLDDM 304

Query: 520 LKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDL 579
           +K+++ MQ     PD VT++ +++  G+CG L E   VF EM+R  ++P    + +L++ 
Sbjct: 305 MKVFKFMQEKNCTPDLVTWNSLLKSFGNCGMLTEVSNVFREMKRAGYMPGVDTFNILIEC 364

Query: 580 WGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPS 639
           +G+ G V  + + Y+ +L+ GL+P VPT  +L+++  R G+      + Q M   GL+ S
Sbjct: 365 YGRCGYVDYSVDIYKGLLRTGLQPTVPTFAALMASLAREGRWQQCEKVSQEMAEAGLQLS 424



 Score =  170 bits (430), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 102/360 (28%), Positives = 180/360 (50%), Gaps = 7/360 (1%)

Query: 297 VVESVSRILRQWKWGP---LAEEALGNTNYSMDAYQANQVLKQLQDHT---VALGFFNWL 350
           +V  V  + RQ KW     + E    +  + +       +L  L +H     AL  F  L
Sbjct: 5   LVYFVKALGRQGKWKKALEVFEWIRKHDCFKLRGVATASILSVLGNHEQLPAALELFESL 64

Query: 351 RRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYG-RAN 409
           ++   +  D + YT+++ IL RAR+F     L + M R+G + N VTYN ++  YG R +
Sbjct: 65  KQDESYSLDVYAYTSLISILSRARRFDEGITLFETMQREGQRGNAVTYNVMLDLYGKRGD 124

Query: 410 YLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYS 469
             +    +F++M+ +   PD  TY T+I    +      A+ ++++M+ AG  P+  TY+
Sbjct: 125 SWDRIQSLFQEMKDLEISPDDYTYNTMITACIQNSHCQEALRLFQEMKEAGCCPNRVTYN 184

Query: 470 VIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNA 529
            +++  GK G  + A +L  EM   G  PN+VTYN +IA  A+A     A  L + + + 
Sbjct: 185 ALLDVYGKGGMHKEASELLVEMEAAGISPNIVTYNELIAAYARAGLCDEAAALKKSLLSK 244

Query: 530 GFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKA 589
           G  PD+ TY  ++         ++A   F EMR+ N  P+   Y +L+D++G+   +   
Sbjct: 245 GLCPDEFTYCTLISAFNRAERYEKALETFTEMRKTNCTPNIVTYNILIDIYGRMEKLDDM 304

Query: 590 WEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSC 649
            + ++ M +    P++ T NSLL +F   G L++  ++ + M   G  P + T+ +L+ C
Sbjct: 305 MKVFKFMQEKNCTPDLVTWNSLLKSFGNCGMLTEVSNVFREMKRAGYMPGVDTFNILIEC 364



 Score =  135 bits (339), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 105/406 (25%), Positives = 182/406 (44%), Gaps = 39/406 (9%)

Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLI 402
           AL  F  ++ +AG   +  TY  ++ + G+       ++LL +M   G  PN+VTYN LI
Sbjct: 164 ALRLFQEMK-EAGCCPNRVTYNALLDVYGKGGMHKEASELLVEMEAAGISPNIVTYNELI 222

Query: 403 HSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLS 462
            +Y RA   +EA  + K +   G  PD  TYCTLI    +A   + A++ + +M+    +
Sbjct: 223 AAYARAGLCDEAAALKKSLLSKGLCPDEFTYCTLISAFNRAERYEKALETFTEMRKTNCT 282

Query: 463 PDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKL 522
           P+  TY+++I+  G+   L    ++F  M  + C P+LVT+N ++              +
Sbjct: 283 PNIVTYNILIDIYGRMEKLDDMMKVFKFMQEKNCTPDLVTWNSLLKSFGNCGMLTEVSNV 342

Query: 523 YRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGK 582
           +R+M+ AG+ P   T++I++E  G CGY+D +  ++  + R    P  P +  L+    +
Sbjct: 343 FREMKRAGYMPGVDTFNILIECYGRCGYVDYSVDIYKGLLRTGLQPTVPTFAALMASLAR 402

Query: 583 AGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYH--LLQGMLNLGLKPSL 640
            G  ++  +  + M +AGL                  QLSDA H  L+    N G    L
Sbjct: 403 EGRWQQCEKVSQEMAEAGL------------------QLSDACHAGLIHSYANSGQFFQL 444

Query: 641 QTYTLLLSCCTEARSPYDMGFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEM 700
           + Y   L     A+ P           +SG     F+L+      D +  +  +    + 
Sbjct: 445 RKYIDELE--KSAKQP-----------LSGILCKTFVLAYCKCCMDNE-AQLALNQLYDN 490

Query: 701 MHSEDRESKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAV 746
            HS D +    + +A++    K G  E A  + E   +  + PD V
Sbjct: 491 GHSPDIK----VFNAMISMCAKRGWIERAVKLLEEIRKAQLKPDGV 532



 Score =  133 bits (335), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 84/329 (25%), Positives = 151/329 (45%), Gaps = 36/329 (10%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           G   DE TY T++    RA ++    +   +M +  C PN+VTYN LI  YGR   L++ 
Sbjct: 245 GLCPDEFTYCTLISAFNRAERYEKALETFTEMRKTNCTPNIVTYNILIDIYGRMEKLDDM 304

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
           + VFK MQ   C PD VT+ +L+      G L    +++++M+ AG  P   T++++I C
Sbjct: 305 MKVFKFMQEKNCTPDLVTWNSLLKSFGNCGMLTEVSNVFREMKRAGYMPGVDTFNILIEC 364

Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPD 534
            G+ G++  +  ++  ++  G  P + T+  ++A  A+   +Q   K+ ++M  AG +  
Sbjct: 365 YGRCGYVDYSVDIYKGLLRTGLQPTVPTFAALMASLAREGRWQQCEKVSQEMAEAGLQLS 424

Query: 535 KVTYSIVMEVLGHCG-------YLD-----------------------------EAEAVF 558
              ++ ++    + G       Y+D                             EA+   
Sbjct: 425 DACHAGLIHSYANSGQFFQLRKYIDELEKSAKQPLSGILCKTFVLAYCKCCMDNEAQLAL 484

Query: 559 AEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRV 618
            ++      PD  V+  ++ +  K G + +A +  E + +A L+P+  T N L+S + R 
Sbjct: 485 NQLYDNGHSPDIKVFNAMISMCAKRGWIERAVKLLEEIRKAQLKPDGVTYNCLMSMYGRE 544

Query: 619 GQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
           G    A  ++  M   G  P+L TY  LL
Sbjct: 545 GMYHKAEEVMSEMRRAGKAPNLITYNTLL 573



 Score =  110 bits (276), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 80/325 (24%), Positives = 150/325 (46%), Gaps = 36/325 (11%)

Query: 359 DEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVF 418
           D  T+ +++   G       ++ +  +M R G  P V T+N LI  YGR  Y++ ++D++
Sbjct: 319 DLVTWNSLLKSFGNCGMLTEVSNVFREMKRAGYMPGVDTFNILIECYGRCGYVDYSVDIY 378

Query: 419 KQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKA 478
           K +   G +P   T+  L+   A+ G       + ++M  AGL      ++ +I+    +
Sbjct: 379 KGLLRTGLQPTVPTFAALMASLAREGRWQQCEKVSQEMAEAGLQLSDACHAGLIHSYANS 438

Query: 479 GHL-----------QAAHQ----LFC---------------------EMVNQGCIPNLVT 502
           G             ++A Q    + C                     ++ + G  P++  
Sbjct: 439 GQFFQLRKYIDELEKSAKQPLSGILCKTFVLAYCKCCMDNEAQLALNQLYDNGHSPDIKV 498

Query: 503 YNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMR 562
           +N MI++ AK    + A+KL  +++ A  +PD VTY+ +M + G  G   +AE V +EMR
Sbjct: 499 FNAMISMCAKRGWIERAVKLLEEIRKAQLKPDGVTYNCLMSMYGREGMYHKAEEVMSEMR 558

Query: 563 RKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLS 622
           R    P+   Y  L+  + K G +  A   +  M+ A +RP+  T N+L+ ++  +G   
Sbjct: 559 RAGKAPNLITYNTLLYSYTKHGRMDDAARVFGDMVAARVRPDNFTFNTLVGSYSSLGLYK 618

Query: 623 DAYHLLQGMLNLGLKPSLQTYTLLL 647
           +A  +++ M   G +P+  T+  LL
Sbjct: 619 EALSVIEYMTEHGCQPTQITFKALL 643



 Score = 87.0 bits (214), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 55/227 (24%), Positives = 106/227 (46%), Gaps = 1/227 (0%)

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQP-NVVTYNRLIHSYGRANYL 411
           +AG +  +  +  ++     + QF  + K +D++ +   QP + +     + +Y +    
Sbjct: 418 EAGLQLSDACHAGLIHSYANSGQFFQLRKYIDELEKSAKQPLSGILCKTFVLAYCKCCMD 477

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
           NEA     Q+   G  PD   +  +I + AK G+++ A+ + ++++ A L PD  TY+ +
Sbjct: 478 NEAQLALNQLYDNGHSPDIKVFNAMISMCAKRGWIERAVKLLEEIRKAQLKPDGVTYNCL 537

Query: 472 INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF 531
           ++  G+ G    A ++  EM   G  PNL+TYN ++    K      A +++ DM  A  
Sbjct: 538 MSMYGREGMYHKAEEVMSEMRRAGKAPNLITYNTLLYSYTKHGRMDDAARVFGDMVAARV 597

Query: 532 EPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVD 578
            PD  T++ ++      G   EA +V   M      P +  +  L+D
Sbjct: 598 RPDNFTFNTLVGSYSSLGLYKEALSVIEYMTEHGCQPTQITFKALLD 644



 Score = 80.5 bits (197), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 59/255 (23%), Positives = 113/255 (44%), Gaps = 1/255 (0%)

Query: 362 TYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQM 421
           T+  ++  L R  ++    K+  +M   G Q +   +  LIHSY  +    +      ++
Sbjct: 392 TFAALMASLAREGRWQQCEKVSQEMAEAGLQLSDACHAGLIHSYANSGQFFQLRKYIDEL 451

Query: 422 QVVGCEPDRVTYC-TLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGH 480
           +    +P     C T +  + K    + A     ++   G SPD   ++ +I+   K G 
Sbjct: 452 EKSAKQPLSGILCKTFVLAYCKCCMDNEAQLALNQLYDNGHSPDIKVFNAMISMCAKRGW 511

Query: 481 LQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSI 540
           ++ A +L  E+      P+ VTYN ++++  +   Y  A ++  +M+ AG  P+ +TY+ 
Sbjct: 512 IERAVKLLEEIRKAQLKPDGVTYNCLMSMYGREGMYHKAEEVMSEMRRAGKAPNLITYNT 571

Query: 541 VMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAG 600
           ++      G +D+A  VF +M      PD   +  LV  +   G  ++A    E M + G
Sbjct: 572 LLYSYTKHGRMDDAARVFGDMVAARVRPDNFTFNTLVGSYSSLGLYKEALSVIEYMTEHG 631

Query: 601 LRPNVPTCNSLLSAF 615
            +P   T  +LL  +
Sbjct: 632 CQPTQITFKALLDGY 646



 Score = 68.9 bits (167), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 34/122 (27%), Positives = 62/122 (50%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           R+A  K D  TY  ++ + GR   +    +++ +M R G  PN++TYN L++SY +   +
Sbjct: 523 RKAQLKPDGVTYNCLMSMYGREGMYHKAEEVMSEMRRAGKAPNLITYNTLLYSYTKHGRM 582

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
           ++A  VF  M      PD  T+ TL+  ++  G    A+ + + M   G  P   T+  +
Sbjct: 583 DDAARVFGDMVAARVRPDNFTFNTLVGSYSSLGLYKEALSVIEYMTEHGCQPTQITFKAL 642

Query: 472 IN 473
           ++
Sbjct: 643 LD 644


>gi|224056220|ref|XP_002298762.1| predicted protein [Populus trichocarpa]
 gi|222846020|gb|EEE83567.1| predicted protein [Populus trichocarpa]
          Length = 643

 Score =  187 bits (475), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 97/303 (32%), Positives = 166/303 (54%), Gaps = 1/303 (0%)

Query: 345 GFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHS 404
           G F  ++  AG   DE+TY T++    R         +   M   G  P+ VTYN L+  
Sbjct: 90  GLFEGMK-NAGVLPDEYTYNTLITCCRRGSLHEEAAAVFKDMKSMGFVPDKVTYNALLDV 148

Query: 405 YGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPD 464
           YG++    EA++V ++M+V GC P  VTY +LI  +A+ G L  AM++  +M   G++ D
Sbjct: 149 YGKSRRTKEAMEVLREMEVNGCSPSIVTYNSLISAYARDGLLKEAMELKNQMVEGGINLD 208

Query: 465 TFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYR 524
            FTY+ +++   +AG  ++A ++F EM   GC PN+ T+N +I +      +   +K++ 
Sbjct: 209 VFTYTTLLSGFVRAGKDESAMRVFAEMRAAGCKPNICTFNALIKMHGNRGKFAEMMKVFE 268

Query: 525 DMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAG 584
           +++N+   PD VT++ ++ V G  G   E   VF EM+R  +VP+   Y  L+  + + G
Sbjct: 269 EIKNSCCVPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERDTYNTLISAYSRCG 328

Query: 585 NVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYT 644
           +  +A + Y+ ML+AG+ P++ T N++L+A  R G    +  +   M +   KP+  TY 
Sbjct: 329 SFDQAMDIYKRMLEAGITPDLSTYNAVLAALARGGLWEQSEKIFAEMKDGRCKPNELTYC 388

Query: 645 LLL 647
            LL
Sbjct: 389 SLL 391



 Score =  161 bits (407), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 90/304 (29%), Positives = 158/304 (51%), Gaps = 1/304 (0%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           R AG K +  T+  ++ + G   +F  + K+ +++    C P++VT+N L+  +G+    
Sbjct: 236 RAAGCKPNICTFNALIKMHGNRGKFAEMMKVFEEIKNSCCVPDIVTWNTLLAVFGQNGMD 295

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
           +E   VFK+M+  G  P+R TY TLI  +++ G  D AMD+YK+M  AG++PD  TY+ +
Sbjct: 296 SEVSGVFKEMKRAGFVPERDTYNTLISAYSRCGSFDQAMDIYKRMLEAGITPDLSTYNAV 355

Query: 472 INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF 531
           +  L + G  + + ++F EM +  C PN +TY  ++   A  +     L L  ++ +   
Sbjct: 356 LAALARGGLWEQSEKIFAEMKDGRCKPNELTYCSLLHAYANGKEIGRMLALAEEICSGVI 415

Query: 532 EPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWE 591
           EP  V    ++ V   C  L EAE  F E++RK + PD      ++ ++G+     K  E
Sbjct: 416 EPHAVLLKTLVLVNSKCDLLVEAEVAFLELKRKGFSPDLSTLNAMLSIYGRRQMFTKTNE 475

Query: 592 WYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTY-TLLLSCC 650
               M ++G  P++ T NSL+    R      +  +L+ +L  G+KP   +Y T++ + C
Sbjct: 476 ILNFMNESGFTPSLATYNSLMYMHSRSENFERSEEVLKEILAKGIKPDTISYNTVIFAYC 535

Query: 651 TEAR 654
              R
Sbjct: 536 RNGR 539



 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 92/341 (26%), Positives = 169/341 (49%), Gaps = 7/341 (2%)

Query: 316 EALGNTNYSMDAYQANQVL---KQLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGR 372
           E + N     D Y  N ++   ++   H  A   F  ++   GF  D+ TY  ++ + G+
Sbjct: 93  EGMKNAGVLPDEYTYNTLITCCRRGSLHEEAAAVFKDMK-SMGFVPDKVTYNALLDVYGK 151

Query: 373 ARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVT 432
           +R+     ++L +M  +GC P++VTYN LI +Y R   L EA+++  QM   G   D  T
Sbjct: 152 SRRTKEAMEVLREMEVNGCSPSIVTYNSLISAYARDGLLKEAMELKNQMVEGGINLDVFT 211

Query: 433 YCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMV 492
           Y TL+    +AG  + AM ++ +M+AAG  P+  T++ +I   G  G      ++F E+ 
Sbjct: 212 YTTLLSGFVRAGKDESAMRVFAEMRAAGCKPNICTFNALIKMHGNRGKFAEMMKVFEEIK 271

Query: 493 NQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLD 552
           N  C+P++VT+N ++A+  +         ++++M+ AGF P++ TY+ ++     CG  D
Sbjct: 272 NSCCVPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERDTYNTLISAYSRCGSFD 331

Query: 553 EAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLL 612
           +A  ++  M      PD   Y  ++    + G   ++ + +  M     +PN  T  SLL
Sbjct: 332 QAMDIYKRMLEAGITPDLSTYNAVLAALARGGLWEQSEKIFAEMKDGRCKPNELTYCSLL 391

Query: 613 SAFLRVGQLSDAYHLLQGMLNLGLKPS---LQTYTLLLSCC 650
            A+    ++     L + + +  ++P    L+T  L+ S C
Sbjct: 392 HAYANGKEIGRMLALAEEICSGVIEPHAVLLKTLVLVNSKC 432



 Score =  144 bits (364), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 95/347 (27%), Positives = 170/347 (48%), Gaps = 43/347 (12%)

Query: 341 TVALGFFNWLRRQAGFKHDEHTYTTMVGIL---GRARQFGAINKLLDQMVRDGCQPNVVT 397
           +VA    N L +  GF  D + YT+++      GR R+   + K   +M  +GC+P ++T
Sbjct: 15  SVAASLLNDLHKD-GFGLDVYAYTSLITACVSNGRYREAVMVFK---KMEEEGCKPTLIT 70

Query: 398 YNRLIHSYGRANY-LNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKM 456
           YN +++ YG+     N+   +F+ M+  G  PD  TY TLI    +    + A  ++K M
Sbjct: 71  YNVILNVYGKMGMPWNKIKGLFEGMKNAGVLPDEYTYNTLITCCRRGSLHEEAAAVFKDM 130

Query: 457 QAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQA----- 511
           ++ G  PD  TY+ +++  GK+   + A ++  EM   GC P++VTYN +I+  A     
Sbjct: 131 KSMGFVPDKVTYNALLDVYGKSRRTKEAMEVLREMEVNGCSPSIVTYNSLISAYARDGLL 190

Query: 512 ------------------------------KARNYQSALKLYRDMQNAGFEPDKVTYSIV 541
                                         +A   +SA++++ +M+ AG +P+  T++ +
Sbjct: 191 KEAMELKNQMVEGGINLDVFTYTTLLSGFVRAGKDESAMRVFAEMRAAGCKPNICTFNAL 250

Query: 542 MEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGL 601
           +++ G+ G   E   VF E++    VPD   +  L+ ++G+ G   +    ++ M +AG 
Sbjct: 251 IKMHGNRGKFAEMMKVFEEIKNSCCVPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGF 310

Query: 602 RPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
            P   T N+L+SA+ R G    A  + + ML  G+ P L TY  +L+
Sbjct: 311 VPERDTYNTLISAYSRCGSFDQAMDIYKRMLEAGITPDLSTYNAVLA 357



 Score =  128 bits (321), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 76/285 (26%), Positives = 144/285 (50%), Gaps = 1/285 (0%)

Query: 365 TMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVV 424
            ++ +LG+  +      LL+ + +DG   +V  Y  LI +        EA+ VFK+M+  
Sbjct: 3   VIISMLGKEGKVSVAASLLNDLHKDGFGLDVYAYTSLITACVSNGRYREAVMVFKKMEEE 62

Query: 425 GCEPDRVTYCTLIDIHAKAGF-LDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQA 483
           GC+P  +TY  +++++ K G   +    +++ M+ AG+ PD +TY+ +I C  +    + 
Sbjct: 63  GCKPTLITYNVILNVYGKMGMPWNKIKGLFEGMKNAGVLPDEYTYNTLITCCRRGSLHEE 122

Query: 484 AHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVME 543
           A  +F +M + G +P+ VTYN ++ +  K+R  + A+++ R+M+  G  P  VTY+ ++ 
Sbjct: 123 AAAVFKDMKSMGFVPDKVTYNALLDVYGKSRRTKEAMEVLREMEVNGCSPSIVTYNSLIS 182

Query: 544 VLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRP 603
                G L EA  +  +M       D   Y  L+  + +AG    A   +  M  AG +P
Sbjct: 183 AYARDGLLKEAMELKNQMVEGGINLDVFTYTTLLSGFVRAGKDESAMRVFAEMRAAGCKP 242

Query: 604 NVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
           N+ T N+L+      G+ ++   + + + N    P + T+  LL+
Sbjct: 243 NICTFNALIKMHGNRGKFAEMMKVFEEIKNSCCVPDIVTWNTLLA 287



 Score =  122 bits (306), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 70/299 (23%), Positives = 143/299 (47%), Gaps = 1/299 (0%)

Query: 345 GFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHS 404
           G F  ++R AGF  +  TY T++    R   F     +  +M+  G  P++ TYN ++ +
Sbjct: 300 GVFKEMKR-AGFVPERDTYNTLISAYSRCGSFDQAMDIYKRMLEAGITPDLSTYNAVLAA 358

Query: 405 YGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPD 464
             R     ++  +F +M+   C+P+ +TYC+L+  +A    +   + + +++ +  + P 
Sbjct: 359 LARGGLWEQSEKIFAEMKDGRCKPNELTYCSLLHAYANGKEIGRMLALAEEICSGVIEPH 418

Query: 465 TFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYR 524
                 ++    K   L  A   F E+  +G  P+L T N M+++  + + +    ++  
Sbjct: 419 AVLLKTLVLVNSKCDLLVEAEVAFLELKRKGFSPDLSTLNAMLSIYGRRQMFTKTNEILN 478

Query: 525 DMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAG 584
            M  +GF P   TY+ +M +       + +E V  E+  K   PD   Y  ++  + + G
Sbjct: 479 FMNESGFTPSLATYNSLMYMHSRSENFERSEEVLKEILAKGIKPDTISYNTVIFAYCRNG 538

Query: 585 NVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTY 643
            +++A   +  M ++GL P+V T N+ ++++       DA  +++ M+  G KP+  TY
Sbjct: 539 RMKEASRIFSEMRESGLVPDVITYNTFVASYAADSMFEDAIDVVRYMIKHGCKPNQNTY 597



 Score =  118 bits (296), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 68/282 (24%), Positives = 133/282 (47%)

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
           +AG   D  TY  ++  L R   +    K+  +M    C+PN +TY  L+H+Y     + 
Sbjct: 342 EAGITPDLSTYNAVLAALARGGLWEQSEKIFAEMKDGRCKPNELTYCSLLHAYANGKEIG 401

Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
             L + +++     EP  V   TL+ +++K   L  A   + +++  G SPD  T + ++
Sbjct: 402 RMLALAEEICSGVIEPHAVLLKTLVLVNSKCDLLVEAEVAFLELKRKGFSPDLSTLNAML 461

Query: 473 NCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFE 532
           +  G+       +++   M   G  P+L TYN ++ + +++ N++ + ++ +++   G +
Sbjct: 462 SIYGRRQMFTKTNEILNFMNESGFTPSLATYNSLMYMHSRSENFERSEEVLKEILAKGIK 521

Query: 533 PDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEW 592
           PD ++Y+ V+      G + EA  +F+EMR    VPD   Y   V  +        A + 
Sbjct: 522 PDTISYNTVIFAYCRNGRMKEASRIFSEMRESGLVPDVITYNTFVASYAADSMFEDAIDV 581

Query: 593 YEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNL 634
              M++ G +PN  T NS++  + +     DA   +  +  L
Sbjct: 582 VRYMIKHGCKPNQNTYNSVVDGYCKHNHRDDAIMFISSLHEL 623



 Score =  102 bits (253), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 67/216 (31%), Positives = 104/216 (48%), Gaps = 36/216 (16%)

Query: 469 SVIINCLGKAGHLQAAHQL-----------------------------------FCEMVN 493
           +VII+ LGK G +  A  L                                   F +M  
Sbjct: 2   AVIISMLGKEGKVSVAASLLNDLHKDGFGLDVYAYTSLITACVSNGRYREAVMVFKKMEE 61

Query: 494 QGCIPNLVTYNIMIALQAKARNYQSALK-LYRDMQNAGFEPDKVTYSIVMEVLGHCGYLD 552
           +GC P L+TYN+++ +  K     + +K L+  M+NAG  PD+ TY+ ++         +
Sbjct: 62  EGCKPTLITYNVILNVYGKMGMPWNKIKGLFEGMKNAGVLPDEYTYNTLITCCRRGSLHE 121

Query: 553 EAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLL 612
           EA AVF +M+   +VPD+  Y  L+D++GK+   ++A E    M   G  P++ T NSL+
Sbjct: 122 EAAAVFKDMKSMGFVPDKVTYNALLDVYGKSRRTKEAMEVLREMEVNGCSPSIVTYNSLI 181

Query: 613 SAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
           SA+ R G L +A  L   M+  G+   + TYT LLS
Sbjct: 182 SAYARDGLLKEAMELKNQMVEGGINLDVFTYTTLLS 217



 Score = 90.5 bits (223), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 48/161 (29%), Positives = 84/161 (52%), Gaps = 1/161 (0%)

Query: 347 FNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYG 406
           F  L+R+ GF  D  T   M+ I GR + F   N++L+ M   G  P++ TYN L++ + 
Sbjct: 442 FLELKRK-GFSPDLSTLNAMLSIYGRRQMFTKTNEILNFMNESGFTPSLATYNSLMYMHS 500

Query: 407 RANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTF 466
           R+     + +V K++   G +PD ++Y T+I  + + G +  A  ++ +M+ +GL PD  
Sbjct: 501 RSENFERSEEVLKEILAKGIKPDTISYNTVIFAYCRNGRMKEASRIFSEMRESGLVPDVI 560

Query: 467 TYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMI 507
           TY+  +         + A  +   M+  GC PN  TYN ++
Sbjct: 561 TYNTFVASYAADSMFEDAIDVVRYMIKHGCKPNQNTYNSVV 601



 Score = 40.0 bits (92), Expect = 4.9,   Method: Compositional matrix adjust.
 Identities = 22/85 (25%), Positives = 38/85 (44%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           R++G   D  TY T V        F     ++  M++ GC+PN  TYN ++  Y + N+ 
Sbjct: 551 RESGLVPDVITYNTFVASYAADSMFEDAIDVVRYMIKHGCKPNQNTYNSVVDGYCKHNHR 610

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTL 436
           ++A+     +  +     R   C L
Sbjct: 611 DDAIMFISSLHELDPHISREEKCRL 635


>gi|326489575|dbj|BAK01768.1| predicted protein [Hordeum vulgare subsp. vulgare]
 gi|326520708|dbj|BAJ92717.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 776

 Score =  186 bits (472), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 128/448 (28%), Positives = 221/448 (49%), Gaps = 7/448 (1%)

Query: 354 AGFKHDEHTYTTMVGILGRARQFGAINKLLDQM-VRDGCQP-NVVTYNRLIHSYGRANYL 411
           AG + D+ TY   V  L RA +  A  KL D+M  RDG  P +   Y+ ++    ++  L
Sbjct: 247 AGCELDKGTYELAVPALARAGRIDASRKLFDEMRQRDGVGPASPGVYSTMVDVLAKSGRL 306

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
           + A+ ++++M  V          ++++   KAG LD  M+++++M+  GL P    Y+++
Sbjct: 307 DAAMGMYREMVAVEHRVSTSVSTSMVEGLVKAGKLDAGMELWEEMRRGGLRPSFGLYTMV 366

Query: 472 INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF 531
           +    ++G L  A +LF +M   G  P   TY  ++ + A A N   A+K+Y  M NAG 
Sbjct: 367 LEANARSGRLDVAAKLFGDMERSGFFPTPATYACLVEMHASAGNVDVAMKMYHSMANAGT 426

Query: 532 EPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWE 591
            P   T++ ++ +L +   LD A  V  EM+   + P E     L+ ++ K G+   A  
Sbjct: 427 RPGLSTFTSLLTMLANKKLLDLAAKVLLEMKASGF-PIEVTASDLLMIYIKDGSTELALR 485

Query: 592 WYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCT 651
           W   M  AG+R N      L  + +++G    A  LL+  ++   K  +  YT +L+   
Sbjct: 486 WLRFMGSAGIRTNNFIIRQLFESCMKMGLYDSARPLLETYVSAAAKVDMILYTSILAHLV 545

Query: 652 EARSPYDMGFCHELMAVSGHPAHMFLLSMPSPGPDGQN--VRDHVGSFLEMMHSEDRES- 708
             +          +++VS H AH F+  + + GP+ +   V   V  F + +  E+ ES 
Sbjct: 546 RCQDEDSERAIMNILSVSRHKAHDFMCGLFT-GPEQRKKPVLSFVREFFQGIDYENEESA 604

Query: 709 KRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAVKEKGMSYWLINLHVMSDGTAVI 768
            R  V+ ++++L   G    A  VW+VA +  ++P A+       W +++  +S G A++
Sbjct: 605 ARYFVNVLLNYLVLMGQMNRARCVWKVAYENKLFPKAIVFDQHIAWSLDIRNLSVGAALV 664

Query: 769 ALSRTLAWFRKQMLISGVGPSRIDIVTG 796
           +   TL  FRK+ML  GV P RI +VTG
Sbjct: 665 STVHTLHRFRKRMLYYGVVPRRIKLVTG 692



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 52/186 (27%), Positives = 88/186 (47%), Gaps = 3/186 (1%)

Query: 467 TYSVIINCLGKAGHLQAAHQLFCEMVNQGCIP-NLVTYNIMIALQAKARNYQSALKLYRD 525
           T + +++ L   G L+ A   F  + + G       TYN +++L         A ++  +
Sbjct: 184 TLNAVVSALSAHGLLEPAFYCFKRLRDAGFHGLQTTTYNALLSLLLARGLAFKAFEVLDE 243

Query: 526 MQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWV-PDEP-VYGLLVDLWGKA 583
           M  AG E DK TY + +  L   G +D +  +F EMR+++ V P  P VY  +VD+  K+
Sbjct: 244 MSVAGCELDKGTYELAVPALARAGRIDASRKLFDEMRQRDGVGPASPGVYSTMVDVLAKS 303

Query: 584 GNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTY 643
           G +  A   Y  M+    R +     S++   ++ G+L     L + M   GL+PS   Y
Sbjct: 304 GRLDAAMGMYREMVAVEHRVSTSVSTSMVEGLVKAGKLDAGMELWEEMRRGGLRPSFGLY 363

Query: 644 TLLLSC 649
           T++L  
Sbjct: 364 TMVLEA 369



 Score = 65.9 bits (159), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 62/213 (29%), Positives = 96/213 (45%), Gaps = 3/213 (1%)

Query: 444 GFLDVAMDMYKKMQAAGL-SPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVT 502
           G L+ A   +K+++ AG     T TY+ +++ L   G    A ++  EM   GC  +  T
Sbjct: 196 GLLEPAFYCFKRLRDAGFHGLQTTTYNALLSLLLARGLAFKAFEVLDEMSVAGCELDKGT 255

Query: 503 YNIMIALQAKARNYQSALKLYRDM-QNAGFEPDKV-TYSIVMEVLGHCGYLDEAEAVFAE 560
           Y + +   A+A    ++ KL+ +M Q  G  P     YS +++VL   G LD A  ++ E
Sbjct: 256 YELAVPALARAGRIDASRKLFDEMRQRDGVGPASPGVYSTMVDVLAKSGRLDAAMGMYRE 315

Query: 561 MRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQ 620
           M          V   +V+   KAG +    E +E M + GLRP+      +L A  R G+
Sbjct: 316 MVAVEHRVSTSVSTSMVEGLVKAGKLDAGMELWEEMRRGGLRPSFGLYTMVLEANARSGR 375

Query: 621 LSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEA 653
           L  A  L   M   G  P+  TY  L+     A
Sbjct: 376 LDVAAKLFGDMERSGFFPTPATYACLVEMHASA 408



 Score = 58.5 bits (140), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 49/207 (23%), Positives = 84/207 (40%), Gaps = 1/207 (0%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           R+ G +     YT ++    R+ +     KL   M R G  P   TY  L+  +  A  +
Sbjct: 352 RRGGLRPSFGLYTMVLEANARSGRLDVAAKLFGDMERSGFFPTPATYACLVEMHASAGNV 411

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
           + A+ ++  M   G  P   T+ +L+ + A    LD+A  +  +M+A+G  P   T S +
Sbjct: 412 DVAMKMYHSMANAGTRPGLSTFTSLLTMLANKKLLDLAAKVLLEMKASGF-PIEVTASDL 470

Query: 472 INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF 531
           +    K G  + A +    M + G   N      +     K   Y SA  L     +A  
Sbjct: 471 LMIYIKDGSTELALRWLRFMGSAGIRTNNFIIRQLFESCMKMGLYDSARPLLETYVSAAA 530

Query: 532 EPDKVTYSIVMEVLGHCGYLDEAEAVF 558
           + D + Y+ ++  L  C   D   A+ 
Sbjct: 531 KVDMILYTSILAHLVRCQDEDSERAIM 557


>gi|302806665|ref|XP_002985064.1| hypothetical protein SELMODRAFT_424099 [Selaginella moellendorffii]
 gi|300147274|gb|EFJ13939.1| hypothetical protein SELMODRAFT_424099 [Selaginella moellendorffii]
          Length = 1636

 Score =  186 bits (471), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 115/391 (29%), Positives = 190/391 (48%), Gaps = 36/391 (9%)

Query: 292  ASTGNVVESVSRILR-QWKWGPLAEEALGNTNYSMDAYQANQVLKQLQDHTVALGFFNWL 350
            A+ G     + RIL  ++ W   AE AL      +      +VL+ +++   ALGFF+W 
Sbjct: 776  ATQGGFHHKIVRILNSRFAW-EYAETALERFTGKLTTTVVGKVLQGVRNGDAALGFFDWA 834

Query: 351  RRQAGFKHDEH---------------------------------TYTTMVGILGRARQFG 377
              Q G+ HD +                                 T+T ++  L RA   G
Sbjct: 835  TSQEGYNHDTYTCNCLLQALLRLKRPKDALQVYRNKLCCSPNMFTFTILIHGLCRAGDIG 894

Query: 378  AINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVG-CEPDRVTYCTL 436
               +LL +M R G   NV+ +N +I     A  L+ AL++FK+M+  G C PD  TY T+
Sbjct: 895  TAYELLKEMPRHGVPQNVILHNVVIKGLCSARKLDSALELFKEMEESGSCPPDVFTYSTI 954

Query: 437  IDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGC 496
            +D   K+G +D A  + + M + G SP+  TYS +++ L KAG L  A  L   M   GC
Sbjct: 955  VDSLVKSGKVDDACRLVEDMVSKGCSPNVVTYSSLLHGLCKAGKLDEATALLQRMTRSGC 1014

Query: 497  IPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEA 556
             PN+VTYN +I    K      A  L  +M + G +P+ VTY+++++    CG  ++A  
Sbjct: 1015 SPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAEDAIG 1074

Query: 557  VFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFL 616
            +   M  K +VP+   Y  L+D++ K   V +A +   +M+Q G  PNV + N++++   
Sbjct: 1075 LVEVMVEKGYVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLC 1134

Query: 617  RVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
            +  ++ +   LL+ ML+    P + T+  ++
Sbjct: 1135 KATKVHEGVLLLEQMLSNNCVPDIVTFNTII 1165



 Score =  170 bits (431), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 120/428 (28%), Positives = 191/428 (44%), Gaps = 29/428 (6%)

Query: 343  ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLI 402
            AL  F  +        D  TY+T+V  L ++ +     +L++ MV  GC PNVVTY+ L+
Sbjct: 931  ALELFKEMEESGSCPPDVFTYSTIVDSLVKSGKVDDACRLVEDMVSKGCSPNVVTYSSLL 990

Query: 403  HSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLS 462
            H   +A  L+EA  + ++M   GC P+ VTY T+ID H K G +D A  + ++M   G  
Sbjct: 991  HGLCKAGKLDEATALLQRMTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQ 1050

Query: 463  PDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKL 522
            P+  TY+V+++   K G  + A  L   MV +G +PNL TYN ++ +  K    + A +L
Sbjct: 1051 PNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKDEVERACQL 1110

Query: 523  YRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGK 582
               M   G  P+ V+Y+ V+  L     + E   +  +M   N VPD   +  ++D   K
Sbjct: 1111 LSSMIQKGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQMLSNNCVPDIVTFNTIIDAMCK 1170

Query: 583  AGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGML-NLGLKPSLQ 641
               V  A+E +  + ++G  PN+ T NSL+    +  +   A +LL+ M    G  P + 
Sbjct: 1171 TYRVDIAYELFNLIQESGCTPNLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQGCSPDII 1230

Query: 642  TYTLLLSCCTEARSPYDMGFCHELMAVSGHPAHMFLLSMPSPG--PDGQN---------- 689
            TY  ++            G C          A+   L M S G  PD             
Sbjct: 1231 TYNTVID-----------GLCKSKRV---DRAYKLFLQMLSDGLAPDDVTYSIVISSLCK 1276

Query: 690  --VRDHVGSFLEMMHSEDRESKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAVK 747
                D   + LE+M     +        ++D   K+G  ++A  + ++   K  YPD V 
Sbjct: 1277 WRFMDEANNVLELMLKNGFDPGAITYGTLIDGFCKTGNLDKALEILQLLLSKGSYPDVVT 1336

Query: 748  EKGMSYWL 755
                  WL
Sbjct: 1337 FSIFIDWL 1344



 Score =  169 bits (427), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 94/296 (31%), Positives = 149/296 (50%)

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
           + G++ +  TY  ++ +  R       +++L  M++ GC P+ + Y+ +I  + +A  L 
Sbjct: 363 ERGYRPNAITYNNIMHVFCRRNDMERAHQVLQMMIQTGCPPDAINYSTIISGFCKAGKLR 422

Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
           EA D+ +QM   GC PD     TLID   KA  +D A ++ +       +PD   YS++I
Sbjct: 423 EAHDLLEQMIRRGCRPDVACLSTLIDALCKAAAIDSAQELLRMSIGMDCAPDVVAYSILI 482

Query: 473 NCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFE 532
           + L KA  L  A      MV   C P++VTYN ++    K+R    A  L+  M+ AG  
Sbjct: 483 HALCKAKRLPEAESWLDVMVKNRCYPDVVTYNSVVDGLCKSRRINDAFLLFDRMRAAGVM 542

Query: 533 PDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEW 592
           PD VTYSIV+        LD A  +   M+    VPD   Y  L++   KAG V KA++ 
Sbjct: 543 PDVVTYSIVIHSFCKDNNLDSAFKMLERMKEAKCVPDVVTYSALINGLCKAGTVDKAFDV 602

Query: 593 YEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
           ++ ML  G  PN+ T N+L+    ++ ++  A  +L+ M      P   TYT L++
Sbjct: 603 FQEMLGCGCAPNLVTYNTLIDGLCKINKVEQAAEMLEIMRKQSCTPDSITYTCLIN 658



 Score =  165 bits (417), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 118/390 (30%), Positives = 192/390 (49%), Gaps = 19/390 (4%)

Query: 353  QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
            Q G   +  +Y T++  L +A +      LL+QM+ + C P++VT+N +I +  +   ++
Sbjct: 1116 QKGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQMLSNNCVPDIVTFNTIIDAMCKTYRVD 1175

Query: 413  EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKM-QAAGLSPDTFTYSVI 471
             A ++F  +Q  GC P+ VTY +L+    K+   D A  + ++M +  G SPD  TY+ +
Sbjct: 1176 IAYELFNLIQESGCTPNLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQGCSPDIITYNTV 1235

Query: 472  INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF 531
            I+ L K+  +  A++LF +M++ G  P+ VTY+I+I+   K R    A  +   M   GF
Sbjct: 1236 IDGLCKSKRVDRAYKLFLQMLSDGLAPDDVTYSIVISSLCKWRFMDEANNVLELMLKNGF 1295

Query: 532  EPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWE 591
            +P  +TY  +++     G LD+A  +   +  K   PD   + + +D   K G +R+A E
Sbjct: 1296 DPGAITYGTLIDGFCKTGNLDKALEILQLLLSKGSYPDVVTFSIFIDWLSKRGRLRQAGE 1355

Query: 592  WYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCT 651
              E ML+AGL P+  T N+LL  F       DA  L + M   G +P   TYT L+    
Sbjct: 1356 LLETMLRAGLVPDTVTYNTLLKGFCDASLTEDAVDLFEVMRQCGCEPDNATYTTLVGHLV 1415

Query: 652  EARSPYDMGFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRESKRG 711
            + +S  D+     L  VS            S    G  +   + S LE   S + E+   
Sbjct: 1416 DKKSYKDL-----LAEVS-----------KSMVDTGFKLNHELSSKLEA--SIEVEADVR 1457

Query: 712  LVDAVVDFLHKSGLKEEAGSVWEVAAQKNV 741
            L  A+VD   K G  ++A  V+E   Q+NV
Sbjct: 1458 LGCAIVDMFGKCGSPQDARKVFEGMDQRNV 1487



 Score =  153 bits (386), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 108/400 (27%), Positives = 183/400 (45%), Gaps = 5/400 (1%)

Query: 349 WLRRQA---GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSY 405
           WL  Q    G   D  +YTT++  L +  Q     +++D+M++ GCQPNV+TY  L+  +
Sbjct: 286 WLLEQMVTRGCPPDVVSYTTVINGLCKLDQVDEACRVMDKMIQRGCQPNVITYGTLVDGF 345

Query: 406 GRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDT 465
            R   L+ A+++ ++M   G  P+ +TY  ++ +  +   ++ A  + + M   G  PD 
Sbjct: 346 CRVGDLDGAVELVRKMTERGYRPNAITYNNIMHVFCRRNDMERAHQVLQMMIQTGCPPDA 405

Query: 466 FTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRD 525
             YS II+   KAG L+ AH L  +M+ +GC P++   + +I    KA    SA +L R 
Sbjct: 406 INYSTIISGFCKAGKLREAHDLLEQMIRRGCRPDVACLSTLIDALCKAAAIDSAQELLRM 465

Query: 526 MQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGN 585
                  PD V YSI++  L     L EAE+    M +    PD   Y  +VD   K+  
Sbjct: 466 SIGMDCAPDVVAYSILIHALCKAKRLPEAESWLDVMVKNRCYPDVVTYNSVVDGLCKSRR 525

Query: 586 VRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTL 645
           +  A+  ++ M  AG+ P+V T + ++ +F +   L  A+ +L+ M      P + TY+ 
Sbjct: 526 INDAFLLFDRMRAAGVMPDVVTYSIVIHSFCKDNNLDSAFKMLERMKEAKCVPDVVTYSA 585

Query: 646 LLSCCTEARSPYDMGF-CHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSE 704
           L++   +A    D  F   + M   G   ++   +    G    N  +     LE+M  +
Sbjct: 586 LINGLCKA-GTVDKAFDVFQEMLGCGCAPNLVTYNTLIDGLCKINKVEQAAEMLEIMRKQ 644

Query: 705 DRESKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPD 744
                      +++ L  +   EEA  V      K   PD
Sbjct: 645 SCTPDSITYTCLINGLCNASRLEEAWRVLREMKDKGCLPD 684



 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 112/465 (24%), Positives = 209/465 (44%), Gaps = 16/465 (3%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           GF  +  +Y T++    +A +      LL+QMV  GC P+VV+Y  +I+   + + ++EA
Sbjct: 260 GFAPNVFSYNTVLHGFCKANRVENALWLLEQMVTRGCPPDVVSYTTVINGLCKLDQVDEA 319

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
             V  +M   GC+P+ +TY TL+D   + G LD A+++ +KM   G  P+  TY+ I++ 
Sbjct: 320 CRVMDKMIQRGCQPNVITYGTLVDGFCRVGDLDGAVELVRKMTERGYRPNAITYNNIMHV 379

Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPD 534
             +   ++ AHQ+   M+  GC P+ + Y+ +I+   KA   + A  L   M   G  PD
Sbjct: 380 FCRRNDMERAHQVLQMMIQTGCPPDAINYSTIISGFCKAGKLREAHDLLEQMIRRGCRPD 439

Query: 535 KVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYE 594
               S +++ L     +D A+ +       +  PD   Y +L+    KA  + +A  W +
Sbjct: 440 VACLSTLIDALCKAAAIDSAQELLRMSIGMDCAPDVVAYSILIHALCKAKRLPEAESWLD 499

Query: 595 AMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL-SCCTEA 653
            M++    P+V T NS++    +  +++DA+ L   M   G+ P + TY++++ S C + 
Sbjct: 500 VMVKNRCYPDVVTYNSVVDGLCKSRRINDAFLLFDRMRAAGVMPDVVTYSIVIHSFCKDN 559

Query: 654 RSPYDMGFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRESKRGLV 713
                      +      P  +   ++ +       V      F EM+          LV
Sbjct: 560 NLDSAFKMLERMKEAKCVPDVVTYSALINGLCKAGTVDKAFDVFQEMLGC---GCAPNLV 616

Query: 714 --DAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAVKEKGMSYWLINLHVMSDGTAVIALS 771
             + ++D L K    E+A  + E+  +++  PD++    +   L N   + +   V+   
Sbjct: 617 TYNTLIDGLCKINKVEQAAEMLEIMRKQSCTPDSITYTCLINGLCNASRLEEAWRVL--- 673

Query: 772 RTLAWFRKQMLISGVGPSRIDIVTGWGRRSRVTGTSLVRQAVQEL 816
                  ++M   G  P R+   T      +     LV Q ++E+
Sbjct: 674 -------REMKDKGCLPDRMTYGTLLRALQKTNNLELVEQLLKEM 711



 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 122/453 (26%), Positives = 202/453 (44%), Gaps = 17/453 (3%)

Query: 304 ILRQWKWGPLAEEALGNTNYSMDAYQAN-------QVLKQLQDHTVALGFFNWLRRQAGF 356
           +L +   G   E+AL     ++D Y+         +VL++L D   AL FF W   + G+
Sbjct: 66  VLERIVQGASDEQAL---RVALDEYRGQLSPEIVGKVLQRLIDPGAALVFFEWAETRDGY 122

Query: 357 KHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALD 416
           +H+      ++ +L +A Q+   + L    +      + VTY+ LI  + RA  +  A +
Sbjct: 123 QHEIFCCNCLLNVLVKAHQYSQAHDLFRSRIEGQWGGDTVTYSTLISGFIRAGKILPAYE 182

Query: 417 VFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLG 476
           +F +M   G +     + +++     AG    A+  +++M      PD+ TY+ +IN L 
Sbjct: 183 LFDEMNRKGLKAHAGVHKSILRGLCDAGQCSDAVLHFREMSKT-CPPDSVTYNTMINGLS 241

Query: 477 KAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKV 536
           K+  L  A +L  EMV+ G  PN+ +YN ++    KA   ++AL L   M   G  PD V
Sbjct: 242 KSDRLDDAIRLLEEMVDNGFAPNVFSYNTVLHGFCKANRVENALWLLEQMVTRGCPPDVV 301

Query: 537 TYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAM 596
           +Y+ V+  L     +DEA  V  +M ++   P+   YG LVD + + G++  A E    M
Sbjct: 302 SYTTVINGLCKLDQVDEACRVMDKMIQRGCQPNVITYGTLVDGFCRVGDLDGAVELVRKM 361

Query: 597 LQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEA--- 653
            + G RPN  T N+++  F R   +  A+ +LQ M+  G  P    Y+ ++S   +A   
Sbjct: 362 TERGYRPNAITYNNIMHVFCRRNDMERAHQVLQMMIQTGCPPDAINYSTIISGFCKAGKL 421

Query: 654 RSPYDMGFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRESKRGLV 713
           R  +D+    E M   G    +  LS            D     L M    D        
Sbjct: 422 REAHDL---LEQMIRRGCRPDVACLSTLIDALCKAAAIDSAQELLRMSIGMDCAPDVVAY 478

Query: 714 DAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAV 746
             ++  L K+    EA S  +V  +   YPD V
Sbjct: 479 SILIHALCKAKRLPEAESWLDVMVKNRCYPDVV 511



 Score =  139 bits (351), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 92/295 (31%), Positives = 141/295 (47%)

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
           Q G   D   Y+T++    +A +    + LL+QM+R GC+P+V   + LI +  +A  ++
Sbjct: 398 QTGCPPDAINYSTIISGFCKAGKLREAHDLLEQMIRRGCRPDVACLSTLIDALCKAAAID 457

Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
            A ++ +    + C PD V Y  LI    KA  L  A      M      PD  TY+ ++
Sbjct: 458 SAQELLRMSIGMDCAPDVVAYSILIHALCKAKRLPEAESWLDVMVKNRCYPDVVTYNSVV 517

Query: 473 NCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFE 532
           + L K+  +  A  LF  M   G +P++VTY+I+I    K  N  SA K+   M+ A   
Sbjct: 518 DGLCKSRRINDAFLLFDRMRAAGVMPDVVTYSIVIHSFCKDNNLDSAFKMLERMKEAKCV 577

Query: 533 PDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEW 592
           PD VTYS ++  L   G +D+A  VF EM      P+   Y  L+D   K   V +A E 
Sbjct: 578 PDVVTYSALINGLCKAGTVDKAFDVFQEMLGCGCAPNLVTYNTLIDGLCKINKVEQAAEM 637

Query: 593 YEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
            E M +    P+  T   L++      +L +A+ +L+ M + G  P   TY  LL
Sbjct: 638 LEIMRKQSCTPDSITYTCLINGLCNASRLEEAWRVLREMKDKGCLPDRMTYGTLL 692



 Score =  129 bits (323), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 94/321 (29%), Positives = 158/321 (49%), Gaps = 21/321 (6%)

Query: 350  LRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRAN 409
            + R+ G   D  TY T++  L ++++     KL  QM+ DG  P+ VTY+ +I S  +  
Sbjct: 1219 MTRKQGCSPDIITYNTVIDGLCKSKRVDRAYKLFLQMLSDGLAPDDVTYSIVISSLCKWR 1278

Query: 410  YLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYS 469
            +++EA +V + M   G +P  +TY TLID   K G LD A+++ + + + G  PD  T+S
Sbjct: 1279 FMDEANNVLELMLKNGFDPGAITYGTLIDGFCKTGNLDKALEILQLLLSKGSYPDVVTFS 1338

Query: 470  VIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNA 529
            + I+ L K G L+ A +L   M+  G +P+ VTYN ++     A   + A+ L+  M+  
Sbjct: 1339 IFIDWLSKRGRLRQAGELLETMLRAGLVPDTVTYNTLLKGFCDASLTEDAVDLFEVMRQC 1398

Query: 530  GFEPDKVTY-SIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLL------------ 576
            G EPD  TY ++V  ++    Y D    V   M    +  +  +   L            
Sbjct: 1399 GCEPDNATYTTLVGHLVDKKSYKDLLAEVSKSMVDTGFKLNHELSSKLEASIEVEADVRL 1458

Query: 577  ----VDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGML 632
                VD++GK G+ + A + +E M Q     NV   +++L  ++   Q   A+ L + M 
Sbjct: 1459 GCAIVDMFGKCGSPQDARKVFEGMDQR----NVVLWSAMLGVYVFHKQEEQAFGLWRVMG 1514

Query: 633  NLGLKPSLQTYTLLLSCCTEA 653
              G++P   T+  LL+ C  A
Sbjct: 1515 LEGVEPDAVTFLSLLTMCCHA 1535



 Score =  122 bits (305), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 85/296 (28%), Positives = 150/296 (50%), Gaps = 21/296 (7%)

Query: 462  SPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALK 521
            SP+ FT++++I+ L +AG +  A++L  EM   G   N++ +N++I     AR   SAL+
Sbjct: 874  SPNMFTFTILIHGLCRAGDIGTAYELLKEMPRHGVPQNVILHNVVIKGLCSARKLDSALE 933

Query: 522  LYRDMQNAG-FEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLW 580
            L+++M+ +G   PD  TYS +++ L   G +D+A  +  +M  K   P+   Y  L+   
Sbjct: 934  LFKEMEESGSCPPDVFTYSTIVDSLVKSGKVDDACRLVEDMVSKGCSPNVVTYSSLLHGL 993

Query: 581  GKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSL 640
             KAG + +A    + M ++G  PN+ T N+++    ++G++ +AYHLL+ M++ G +P++
Sbjct: 994  CKAGKLDEATALLQRMTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNV 1053

Query: 641  QTYTLLLSCCTEARSPYDMGFCHELMAVSGHPAHMF----LLSMPSPGPDGQNVRDHVGS 696
             TYT+LL    +     D     E+M   G+  ++F    LL M          +D V  
Sbjct: 1054 VTYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNSLLDMFCK-------KDEVER 1106

Query: 697  FLEMMHSEDRESKRGLVDAVVDF------LHKSGLKEEAGSVWEVAAQKNVYPDAV 746
              +++ S     ++G V  VV +      L K+    E   + E     N  PD V
Sbjct: 1107 ACQLLSS---MIQKGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQMLSNNCVPDIV 1159



 Score =  113 bits (283), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 88/294 (29%), Positives = 140/294 (47%), Gaps = 34/294 (11%)

Query: 371  GRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDR 430
            GR RQ G   +LL+ M+R G  P+ VTYN L+  +  A+   +A+D+F+ M+  GCEPD 
Sbjct: 1348 GRLRQAG---ELLETMLRAGLVPDTVTYNTLLKGFCDASLTEDAVDLFEVMRQCGCEPDN 1404

Query: 431  VTYCTLID-IHAKAGFLDVAMDMYKKMQAAG----------------LSPDTFTYSVIIN 473
             TY TL+  +  K  + D+  ++ K M   G                +  D      I++
Sbjct: 1405 ATYTTLVGHLVDKKSYKDLLAEVSKSMVDTGFKLNHELSSKLEASIEVEADVRLGCAIVD 1464

Query: 474  CLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEP 533
              GK G  Q A ++F E ++Q    N+V ++ M+ +    +  + A  L+R M   G EP
Sbjct: 1465 MFGKCGSPQDARKVF-EGMDQ---RNVVLWSAMLGVYVFHKQEEQAFGLWRVMGLEGVEP 1520

Query: 534  DKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWV-PDEPVYGLLVDLWGKAGNVRKAWEW 592
            D VT+  ++ +  H G LD A   F  + R   + P    +  ++DL G+ G V +A + 
Sbjct: 1521 DAVTFLSLLTMCCHAGLLDAAVDEFVSISRDYGLEPGVDHFSCVIDLLGRLGLVNEAEDL 1580

Query: 593  YEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLL 646
               ML    +P+  T N LLSA+   G    A  + +      L P+  +Y LL
Sbjct: 1581 ---MLGMPCKPSAATWNCLLSAYKICGDFERALRVAE------LNPTQASYLLL 1625



 Score =  110 bits (275), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 58/176 (32%), Positives = 100/176 (56%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           R AG   D  TY+ ++    +     +  K+L++M    C P+VVTY+ LI+   +A  +
Sbjct: 537 RAAGVMPDVVTYSIVIHSFCKDNNLDSAFKMLERMKEAKCVPDVVTYSALINGLCKAGTV 596

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
           ++A DVF++M   GC P+ VTY TLID   K   ++ A +M + M+    +PD+ TY+ +
Sbjct: 597 DKAFDVFQEMLGCGCAPNLVTYNTLIDGLCKINKVEQAAEMLEIMRKQSCTPDSITYTCL 656

Query: 472 INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQ 527
           IN L  A  L+ A ++  EM ++GC+P+ +TY  ++    K  N +   +L ++M+
Sbjct: 657 INGLCNASRLEEAWRVLREMKDKGCLPDRMTYGTLLRALQKTNNLELVEQLLKEME 712



 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 32/97 (32%), Positives = 54/97 (55%)

Query: 362 TYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQM 421
           TY T++  L +  +     ++L+ M +  C P+ +TY  LI+    A+ L EA  V ++M
Sbjct: 617 TYNTLIDGLCKINKVEQAAEMLEIMRKQSCTPDSITYTCLINGLCNASRLEEAWRVLREM 676

Query: 422 QVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQA 458
           +  GC PDR+TY TL+    K   L++   + K+M+A
Sbjct: 677 KDKGCLPDRMTYGTLLRALQKTNNLELVEQLLKEMEA 713



 Score = 44.7 bits (104), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 54/221 (24%), Positives = 93/221 (42%), Gaps = 24/221 (10%)

Query: 590  WEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSC 649
            ++W  A  Q G   +  TCN LL A LR+ +  DA  + +    L   P++ T+T+L+  
Sbjct: 831  FDW--ATSQEGYNHDTYTCNCLLQALLRLKRPKDALQVYRN--KLCCSPNMFTFTILIHG 886

Query: 650  CTEARSPYDMGFCHEL---MAVSGHPAHMFLLSMPSPG-PDGQNVRDHVGSFLEMMHSED 705
               A    D+G  +EL   M   G P ++ L ++   G    + +   +  F EM  S  
Sbjct: 887  LCRAG---DIGTAYELLKEMPRHGVPQNVILHNVVIKGLCSARKLDSALELFKEMEESGS 943

Query: 706  RESKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAVKEKGMSYWLINLHVMSDGT 765
                      +VD L KSG  ++A  + E    K   P+ V    + + L     + + T
Sbjct: 944  CPPDVFTYSTIVDSLVKSGKVDDACRLVEDMVSKGCSPNVVTYSSLLHGLCKAGKLDEAT 1003

Query: 766  AVIALSRTLAWFRKQMLISGVGPSRI---DIVTGWGRRSRV 803
            A++          ++M  SG  P+ +    I+ G  +  R+
Sbjct: 1004 ALL----------QRMTRSGCSPNIVTYNTIIDGHCKLGRI 1034


>gi|297826581|ref|XP_002881173.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297327012|gb|EFH57432.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 917

 Score =  185 bits (470), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 132/542 (24%), Positives = 244/542 (45%), Gaps = 68/542 (12%)

Query: 356 FKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEAL 415
            + D  +Y T++  + +  Q     ++L QM      PNVV+Y+ +I  + +A   +EAL
Sbjct: 370 IEQDVFSYNTLLDAICKGGQMDLAFEILAQMPAKRIMPNVVSYSTVIDGFAKAGRFDEAL 429

Query: 416 DVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCL 475
           ++F +M+ +    DRV+Y TL+ I+ K G  + A+D+ ++M + G+  D  TY+ ++   
Sbjct: 430 NLFGEMRYLNIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGY 489

Query: 476 GKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDK 535
           GK G      ++F EM  +  +PNL+TY+ +I   +K   Y+ A++++R+ ++AG   D 
Sbjct: 490 GKQGKYDEVKKVFAEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEVFREFKSAGLRADV 549

Query: 536 VTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEA 595
           V YS +++ L   G +  A ++  EM ++   P+   Y  ++D +G++  + ++ ++   
Sbjct: 550 VLYSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSIIDAFGRSATMERSADYSNG 609

Query: 596 MLQAGLRPNVPTCNSLLSAFLRV---------GQLSDA-------------------YHL 627
                   ++P  +S LS              GQL+                       +
Sbjct: 610 -------GSLPFSSSALSELTETEGNRVIQLFGQLTSEGNNRMTKDCKEGMQELSCILEV 662

Query: 628 LQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGFCHELMAVSGHP----AHMFLLSMPSP 683
            + M  L +KP++ T++ +L+ C+   S  D     E + +  +      H  L+     
Sbjct: 663 FRKMHQLEIKPNVVTFSAILNACSRCNSFEDASMLLEELRLFDNKVYGVVHGLLMGQR-- 720

Query: 684 GPDGQNVRDHVGSFLEMMHSEDRESKRGLVDAVVDFLHKSGLKEEAG---------SVWE 734
               +NV     S  + ++  D  +     +A+ D L   G K  A           VWE
Sbjct: 721 ----ENVWLQAQSLFDKVNEMDGSTASAFYNALTDMLWHFGQKRGAELVALEGRSRQVWE 776

Query: 735 VAAQKNVYPDAVKEKGMSYWLINLHVMSDGTAVIALSRTLAWFRKQMLISGVGPSRIDIV 794
                NV+ D+          ++LH+MS G A   +   L   R  +      P  + I+
Sbjct: 777 -----NVWSDSC---------LDLHLMSSGAARAMVHAWLLNIRSIVYEGHELPKVLSIL 822

Query: 795 TGWGRRSRVTGTSLVRQAVQELLHMFSFPFFTENGNSGCFVGCGEPLNKWLLQSYVDRMH 854
           TGWG+ S+V G   +++AV+ LL     PF     N G F   G  +  WL +S   ++ 
Sbjct: 823 TGWGKHSKVVGDGALKRAVEVLLRGMDAPFHLSKCNMGRFTSSGSVVATWLRESATLKLL 882

Query: 855 LL 856
           +L
Sbjct: 883 IL 884



 Score =  166 bits (419), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 98/330 (29%), Positives = 169/330 (51%), Gaps = 4/330 (1%)

Query: 319 GNTNYSMDAYQANQVLKQLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRA-RQFG 377
           GNT Y+  A  +      L  H  A+  FN ++ + G + +  TY  ++   G+   +F 
Sbjct: 265 GNTVYAFSALISAYGRSGL--HEEAISVFNSMK-EYGLRPNLVTYNAVIDACGKGGMEFK 321

Query: 378 AINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLI 437
            + K  D+M R+  QP+ +T+N L+    R      A ++F +M     E D  +Y TL+
Sbjct: 322 QVAKFFDEMQRNCVQPDRITFNSLLAVCSRGGLWEAARNLFDEMSNRRIEQDVFSYNTLL 381

Query: 438 DIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCI 497
           D   K G +D+A ++  +M A  + P+  +YS +I+   KAG    A  LF EM      
Sbjct: 382 DAICKGGQMDLAFEILAQMPAKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLNIA 441

Query: 498 PNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAV 557
            + V+YN ++++  K    + AL + R+M + G + D VTY+ ++   G  G  DE + V
Sbjct: 442 LDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKV 501

Query: 558 FAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLR 617
           FAEM+R++ +P+   Y  L+D + K G  ++A E +     AGLR +V   ++L+ A  +
Sbjct: 502 FAEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEVFREFKSAGLRADVVLYSALIDALCK 561

Query: 618 VGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
            G +  A  L+  M   G+ P++ TY  ++
Sbjct: 562 NGLVGSAVSLIDEMTKEGISPNVVTYNSII 591



 Score =  105 bits (261), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 71/276 (25%), Positives = 126/276 (45%), Gaps = 45/276 (16%)

Query: 350 LRRQA--GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGR 407
           LR  A  G K D  TY  ++G  G+  ++  + K+  +M R+   PN++TY+ LI  Y +
Sbjct: 467 LREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFAEMKREHVLPNLLTYSTLIDGYSK 526

Query: 408 ANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFT 467
                EA++VF++ +  G   D V Y  LID   K G +  A+ +  +M   G+SP+  T
Sbjct: 527 GGLYKEAMEVFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVT 586

Query: 468 YSVIINCLGKAGHLQAAH---------------------------QLFCEMVNQGCIPNL 500
           Y+ II+  G++  ++ +                            QLF ++ ++G   N 
Sbjct: 587 YNSIIDAFGRSATMERSADYSNGGSLPFSSSALSELTETEGNRVIQLFGQLTSEG--NNR 644

Query: 501 VTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAE 560
           +T +    +Q         L+++R M     +P+ VT+S ++     C   ++A  +  E
Sbjct: 645 MTKDCKEGMQ----ELSCILEVFRKMHQLEIKPNVVTFSAILNACSRCNSFEDASMLLEE 700

Query: 561 MRRKNWVPDEPVYGLLVD-LWGKAGNVRKAWEWYEA 595
           +R    + D  VYG++   L G+  NV     W +A
Sbjct: 701 LR----LFDNKVYGVVHGLLMGQRENV-----WLQA 727



 Score = 96.3 bits (238), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 76/313 (24%), Positives = 133/313 (42%), Gaps = 3/313 (0%)

Query: 436 LIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQG 495
           +I    + G + +A  +++   + G     + +S +I+  G++G  + A  +F  M   G
Sbjct: 239 MISTLGRYGKVTIAKRIFETAFSGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKEYG 298

Query: 496 CIPNLVTYNIMI-ALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEA 554
             PNLVTYN +I A       ++   K + +MQ    +PD++T++ ++ V    G  + A
Sbjct: 299 LRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRNCVQPDRITFNSLLAVCSRGGLWEAA 358

Query: 555 EAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSA 614
             +F EM  +    D   Y  L+D   K G +  A+E    M    + PNV + ++++  
Sbjct: 359 RNLFDEMSNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPAKRIMPNVVSYSTVIDG 418

Query: 615 FLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTE-ARSPYDMGFCHELMAVSGHPA 673
           F + G+  +A +L   M  L +     +Y  LLS  T+  RS   +    E+ +V G   
Sbjct: 419 FAKAGRFDEALNLFGEMRYLNIALDRVSYNTLLSIYTKVGRSEEALDILREMASV-GIKK 477

Query: 674 HMFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRESKRGLVDAVVDFLHKSGLKEEAGSVW 733
            +   +    G   Q   D V      M  E           ++D   K GL +EA  V+
Sbjct: 478 DVVTYNALLGGYGKQGKYDEVKKVFAEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEVF 537

Query: 734 EVAAQKNVYPDAV 746
                  +  D V
Sbjct: 538 REFKSAGLRADVV 550



 Score = 45.1 bits (105), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 34/121 (28%), Positives = 53/121 (43%), Gaps = 8/121 (6%)

Query: 534 DKVTYSIVMEVLGHCGYLDEA----EAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKA 589
           D  TY  ++  LG+ G  D+A    E      RRKN      +   ++   G+ G V  A
Sbjct: 197 DDCTY--IIRELGNRGECDKAVGFYEFAVKRERRKN--EQGKLASAMISTLGRYGKVTIA 252

Query: 590 WEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSC 649
              +E     G    V   ++L+SA+ R G   +A  +   M   GL+P+L TY  ++  
Sbjct: 253 KRIFETAFSGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDA 312

Query: 650 C 650
           C
Sbjct: 313 C 313


>gi|125549696|gb|EAY95518.1| hypothetical protein OsI_17364 [Oryza sativa Indica Group]
          Length = 847

 Score =  185 bits (469), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 135/479 (28%), Positives = 230/479 (48%), Gaps = 29/479 (6%)

Query: 327 AYQANQVLKQLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQM 386
           A++A +VL ++     AL              DE TY  +V  L RA +  A  K+ D+M
Sbjct: 290 AFKAFEVLDEMSSSGCAL--------------DEGTYELVVPALARAGRIDAARKMFDEM 335

Query: 387 -VRDGC-QPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAG 444
             R+G  + +   Y  L+    +A  L+ A+ ++++M  VG          +++   +AG
Sbjct: 336 RKREGIGRASAGMYGVLVDVLAKAGRLDAAMGMYREMVAVGHRASPAVSTAMVEGLVRAG 395

Query: 445 FLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYN 504
            LD  M+++++M+  GL P    Y++++    ++G L  A QLF +M   G  P   TY 
Sbjct: 396 KLDAGMELWEEMRRGGLRPSFGLYTMVVEANARSGRLDVATQLFGDMEKSGFFPTPATYA 455

Query: 505 IMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRK 564
            ++ + A A    +A++LY  M NAG  P   T++ ++ +L +   LD A  V  EM+  
Sbjct: 456 CLVEMHASAGQVDAAMRLYHSMANAGQRPGLSTFTALLMMLANKRMLDLAAKVLLEMKAS 515

Query: 565 NWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDA 624
            + P E     L+ ++ K G+   A  W   M  AG+R N      L  + ++ G    A
Sbjct: 516 GF-PIEVTASDLLMIYIKEGSTELALRWLRFMGSAGIRTNNFIIRQLFESCMKTGLYDSA 574

Query: 625 YHLLQGMLNLGLKPSLQTYTLLLS----CCTEARSPYDMGFCHELMAVSGHPAHMFLLSM 680
             LL+  +    K  L  YT +L+    C  E R    M    ++++VS H AH F+  +
Sbjct: 575 RPLLETYVAGAAKVDLILYTSILAHLVRCQDEGRERAIM----DILSVSKHKAHDFMCGL 630

Query: 681 PSPGPDGQN--VRDHVGSFLEMMHSEDRES-KRGLVDAVVDFLHKSGLKEEAGSVWEVAA 737
            + GP+ +   V   V  F + +  ++ ES  R  V+ ++++L   G    A  +W+VA 
Sbjct: 631 FT-GPEQRKKPVLSFVREFFQGIDYDNEESAARYFVNVLLNYLVLMGQMNRARCIWKVAY 689

Query: 738 QKNVYPDAVKEKGMSYWLINLHVMSDGTAVIALSRTLAWFRKQMLISGVGPSRIDIVTG 796
           +  ++  A+       W +++  +S G A++A   TL  FRK+ML  GV P RI +VTG
Sbjct: 690 ENKLFAKAIVFDQHIAWSLDVRNLSVGAALVATVHTLHRFRKRMLYYGVVPRRIKLVTG 748


>gi|449461223|ref|XP_004148341.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g18940-like [Cucumis sativus]
 gi|449507064|ref|XP_004162923.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g18940-like [Cucumis sativus]
          Length = 844

 Score =  185 bits (469), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 110/398 (27%), Positives = 198/398 (49%), Gaps = 6/398 (1%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           R  G + DE T +T++   GR        +   ++   G +P  VTYN L+  +G+A   
Sbjct: 295 RNEGLQFDEFTCSTVISACGREGLINEAKEFFVELKSSGYEPGTVTYNALLQVFGKAGIY 354

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
           +EAL++ K+M+   C  D VTY  L+  + +AGF +    +   M   G+ P+  TY+ +
Sbjct: 355 SEALNILKEMEDNNCTLDSVTYNELVAAYVRAGFYEEGATVIDTMTRKGVMPNAVTYTTV 414

Query: 472 INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF 531
           IN  G+AG    A QLF +M   GC+PN+ TYN ++AL  K    +  +K+  DM+  G 
Sbjct: 415 INAYGRAGKEVKALQLFNQMKKSGCVPNVCTYNSILALLGKKSRSEEMIKILSDMRINGC 474

Query: 532 EPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWE 591
            P+++T++ ++ + G  G       VF EM+   + P +  +  L+  +G+ G+   A +
Sbjct: 475 PPNRITWNTLLAMCGDKGKHKFVNHVFREMKNCGFEPGKDTFNTLISAYGRCGSELDAAK 534

Query: 592 WYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCT 651
            Y+ M++AG  P   T N+LL+A  R G    A  +L  M N G KP+  +++L+L C  
Sbjct: 535 MYDEMMKAGFTPCATTYNALLNALARRGDWKAAESVLLDMRNKGFKPNETSFSLMLHCYA 594

Query: 652 EA---RSPYDMGFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRES 708
           +    R    +G   ++      P+ + L ++       + VR    +F E+M +   + 
Sbjct: 595 KGGNVRGLERIG--KDIYDGQIFPSWVLLRTLILANFKCRAVRGMERAFEELMKN-GYKP 651

Query: 709 KRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAV 746
              + ++++    K+ + E A  + ++  +  + PD V
Sbjct: 652 DMVIFNSMLSIFAKNNMYERAQKMLDLIRESGLQPDLV 689



 Score =  153 bits (387), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 91/312 (29%), Positives = 157/312 (50%), Gaps = 4/312 (1%)

Query: 343 ALGFFNWLRRQA---GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYN 399
           A+  F W+   +     K D      M+ ILGR  ++    KLLD++  D    +V    
Sbjct: 177 AILLFEWVVSNSVSGDVKLDSKAVELMIRILGRESKYSIALKLLDKIPIDKYSLDVRACT 236

Query: 400 RLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAG-FLDVAMDMYKKMQA 458
            ++H+Y R     +A+ +F++M+  G  P  VTY  ++D++ K G   D  +D+  +M+ 
Sbjct: 237 TILHAYSRNGKYKQAIAMFERMKDCGLSPSLVTYNVMLDVYGKMGRSWDKILDLLDEMRN 296

Query: 459 AGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQS 518
            GL  D FT S +I+  G+ G +  A + F E+ + G  P  VTYN ++ +  KA  Y  
Sbjct: 297 EGLQFDEFTCSTVISACGREGLINEAKEFFVELKSSGYEPGTVTYNALLQVFGKAGIYSE 356

Query: 519 ALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVD 578
           AL + ++M++     D VTY+ ++      G+ +E   V   M RK  +P+   Y  +++
Sbjct: 357 ALNILKEMEDNNCTLDSVTYNELVAAYVRAGFYEEGATVIDTMTRKGVMPNAVTYTTVIN 416

Query: 579 LWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKP 638
            +G+AG   KA + +  M ++G  PNV T NS+L+   +  +  +   +L  M   G  P
Sbjct: 417 AYGRAGKEVKALQLFNQMKKSGCVPNVCTYNSILALLGKKSRSEEMIKILSDMRINGCPP 476

Query: 639 SLQTYTLLLSCC 650
           +  T+  LL+ C
Sbjct: 477 NRITWNTLLAMC 488



 Score =  142 bits (357), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 85/325 (26%), Positives = 166/325 (51%), Gaps = 18/325 (5%)

Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLI 402
           AL  FN +++ +G   +  TY +++ +LG+  +   + K+L  M  +GC PN +T+N L+
Sbjct: 427 ALQLFNQMKK-SGCVPNVCTYNSILALLGKKSRSEEMIKILSDMRINGCPPNRITWNTLL 485

Query: 403 H---SYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAA 459
                 G+  ++N    VF++M+  G EP + T+ TLI  + + G    A  MY +M  A
Sbjct: 486 AMCGDKGKHKFVNH---VFREMKNCGFEPGKDTFNTLISAYGRCGSELDAAKMYDEMMKA 542

Query: 460 GLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSA 519
           G +P   TY+ ++N L + G  +AA  +  +M N+G  PN  ++++M+   AK  N +  
Sbjct: 543 GFTPCATTYNALLNALARRGDWKAAESVLLDMRNKGFKPNETSFSLMLHCYAKGGNVRGL 602

Query: 520 LKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDL 579
            ++ +D+ +    P  V    ++     C  +   E  F E+ +  + PD  ++  ++ +
Sbjct: 603 ERIGKDIYDGQIFPSWVLLRTLILANFKCRAVRGMERAFEELMKNGYKPDMVIFNSMLSI 662

Query: 580 WGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPS 639
           + K     +A +  + + ++GL+P++ T NSL++ + R G+   A  +L+G++  G  P 
Sbjct: 663 FAKNNMYERAQKMLDLIRESGLQPDLVTYNSLMNMYARRGECWKAEEILKGLIKSGESPD 722

Query: 640 LQTYTLLLSCCTEARSPYDMGFCHE 664
           L +Y  ++            GFC +
Sbjct: 723 LVSYNTIIK-----------GFCRQ 736



 Score =  117 bits (293), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 63/287 (21%), Positives = 139/287 (48%)

Query: 362 TYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQM 421
           T+ T++ + G   +   +N +  +M   G +P   T+N LI +YGR     +A  ++ +M
Sbjct: 480 TWNTLLAMCGDKGKHKFVNHVFREMKNCGFEPGKDTFNTLISAYGRCGSELDAAKMYDEM 539

Query: 422 QVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHL 481
              G  P   TY  L++  A+ G    A  +   M+  G  P+  ++S++++C  K G++
Sbjct: 540 MKAGFTPCATTYNALLNALARRGDWKAAESVLLDMRNKGFKPNETSFSLMLHCYAKGGNV 599

Query: 482 QAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIV 541
           +   ++  ++ +    P+ V    +I    K R  +   + + ++   G++PD V ++ +
Sbjct: 600 RGLERIGKDIYDGQIFPSWVLLRTLILANFKCRAVRGMERAFEELMKNGYKPDMVIFNSM 659

Query: 542 MEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGL 601
           + +       + A+ +   +R     PD   Y  L++++ + G   KA E  + ++++G 
Sbjct: 660 LSIFAKNNMYERAQKMLDLIRESGLQPDLVTYNSLMNMYARRGECWKAEEILKGLIKSGE 719

Query: 602 RPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
            P++ + N+++  F R G + +A  ++  M   G+ P + TY   +S
Sbjct: 720 SPDLVSYNTIIKGFCRQGLMQEAIRVMSEMTTRGICPCIFTYNTFVS 766



 Score = 97.4 bits (241), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 50/174 (28%), Positives = 87/174 (50%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           G+K D   + +M+ I  +   +    K+LD +   G QP++VTYN L++ Y R     +A
Sbjct: 648 GYKPDMVIFNSMLSIFAKNNMYERAQKMLDLIRESGLQPDLVTYNSLMNMYARRGECWKA 707

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
            ++ K +   G  PD V+Y T+I    + G +  A+ +  +M   G+ P  FTY+  ++ 
Sbjct: 708 EEILKGLIKSGESPDLVSYNTIIKGFCRQGLMQEAIRVMSEMTTRGICPCIFTYNTFVSG 767

Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQN 528
               G      ++   M+ + C PN +TY I++    KAR YQ A+     ++N
Sbjct: 768 YAGRGMFAEVDEVISYMIQKNCKPNELTYKIIVDGYCKARKYQDAMDFIFGIKN 821



 Score = 91.7 bits (226), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 65/275 (23%), Positives = 119/275 (43%), Gaps = 35/275 (12%)

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGR----- 407
           +AGF     TY  ++  L R   + A   +L  M   G +PN  +++ ++H Y +     
Sbjct: 541 KAGFTPCATTYNALLNALARRGDWKAAESVLLDMRNKGFKPNETSFSLMLHCYAKGGNVR 600

Query: 408 --------------------------ANYLNEALD----VFKQMQVVGCEPDRVTYCTLI 437
                                     AN+   A+      F+++   G +PD V + +++
Sbjct: 601 GLERIGKDIYDGQIFPSWVLLRTLILANFKCRAVRGMERAFEELMKNGYKPDMVIFNSML 660

Query: 438 DIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCI 497
            I AK    + A  M   ++ +GL PD  TY+ ++N   + G    A ++   ++  G  
Sbjct: 661 SIFAKNNMYERAQKMLDLIRESGLQPDLVTYNSLMNMYARRGECWKAEEILKGLIKSGES 720

Query: 498 PNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAV 557
           P+LV+YN +I    +    Q A+++  +M   G  P   TY+  +      G   E + V
Sbjct: 721 PDLVSYNTIIKGFCRQGLMQEAIRVMSEMTTRGICPCIFTYNTFVSGYAGRGMFAEVDEV 780

Query: 558 FAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEW 592
            + M +KN  P+E  Y ++VD + KA   + A ++
Sbjct: 781 ISYMIQKNCKPNELTYKIIVDGYCKARKYQDAMDF 815



 Score = 88.6 bits (218), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 65/318 (20%), Positives = 130/318 (40%), Gaps = 35/318 (11%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           +  GF+  + T+ T++   GR        K+ D+M++ G  P   TYN L+++  R    
Sbjct: 505 KNCGFEPGKDTFNTLISAYGRCGSELDAAKMYDEMMKAGFTPCATTYNALLNALARRGDW 564

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAG----FLDVAMDMY-------------- 453
             A  V   M+  G +P+  ++  ++  +AK G       +  D+Y              
Sbjct: 565 KAAESVLLDMRNKGFKPNETSFSLMLHCYAKGGNVRGLERIGKDIYDGQIFPSWVLLRTL 624

Query: 454 -----------------KKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGC 496
                            +++   G  PD   ++ +++   K    + A ++   +   G 
Sbjct: 625 ILANFKCRAVRGMERAFEELMKNGYKPDMVIFNSMLSIFAKNNMYERAQKMLDLIRESGL 684

Query: 497 IPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEA 556
            P+LVTYN ++ + A+      A ++ + +  +G  PD V+Y+ +++     G + EA  
Sbjct: 685 QPDLVTYNSLMNMYARRGECWKAEEILKGLIKSGESPDLVSYNTIIKGFCRQGLMQEAIR 744

Query: 557 VFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFL 616
           V +EM  +   P    Y   V  +   G   +  E    M+Q   +PN  T   ++  + 
Sbjct: 745 VMSEMTTRGICPCIFTYNTFVSGYAGRGMFAEVDEVISYMIQKNCKPNELTYKIIVDGYC 804

Query: 617 RVGQLSDAYHLLQGMLNL 634
           +  +  DA   + G+ N+
Sbjct: 805 KARKYQDAMDFIFGIKNI 822



 Score = 62.8 bits (151), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 35/135 (25%), Positives = 64/135 (47%)

Query: 350 LRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRAN 409
           L R++G + D  TY +++ +  R  +     ++L  +++ G  P++V+YN +I  + R  
Sbjct: 678 LIRESGLQPDLVTYNSLMNMYARRGECWKAEEILKGLIKSGESPDLVSYNTIIKGFCRQG 737

Query: 410 YLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYS 469
            + EA+ V  +M   G  P   TY T +  +A  G      ++   M      P+  TY 
Sbjct: 738 LMQEAIRVMSEMTTRGICPCIFTYNTFVSGYAGRGMFAEVDEVISYMIQKNCKPNELTYK 797

Query: 470 VIINCLGKAGHLQAA 484
           +I++   KA   Q A
Sbjct: 798 IIVDGYCKARKYQDA 812


>gi|168026089|ref|XP_001765565.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162683203|gb|EDQ69615.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 505

 Score =  185 bits (469), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 107/327 (32%), Positives = 168/327 (51%), Gaps = 32/327 (9%)

Query: 359 DEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVF 418
           D +TYT ++  LG   +  A+ KL + M   GCQPN+ TY+ ++H++G A  ++EA D+F
Sbjct: 134 DVYTYTILIRSLGTIGRIDAVMKLFESMTAQGCQPNLFTYHSVMHAFGSAGRVDEACDIF 193

Query: 419 KQMQVVGCEPDRVTYCTLIDIHAKAGFLDVA----------------------------- 449
           +QM   G +PD VTY  LID   K G L+ A                             
Sbjct: 194 QQMVQKGLQPDAVTYNILIDAFGKTGQLERAFDFVGKSRSFTNEVTYNSLLSSLGRKGDI 253

Query: 450 ---MDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIM 506
              M+++ +M+A GL  +  TY+++I  LG AG ++   QL+ EMV+     ++VT N +
Sbjct: 254 QGLMELFGQMKAKGLVSNELTYAILIERLGWAGRVEDVWQLYLEMVDNDIKYDIVTINNV 313

Query: 507 IALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNW 566
           +   +KA   ++A +L++DM+  G   D VTY+I++  LG  G LD A A+  EM     
Sbjct: 314 LDCLSKAGRVEAAFELFQDMKFKGLNADTVTYNILINGLGRAGKLDAAGALLLEMEENGC 373

Query: 567 VPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYH 626
            P+   Y  L+  +GK  N+  A   +  M + G+ PNV + +SL+  F + G+   A  
Sbjct: 374 APNIITYNTLISSYGKWSNLSAATRLFLEMKERGVAPNVVSYSSLIEGFGKAGRTDAAIS 433

Query: 627 LLQGMLNLGLKPSLQTYTLLLSCCTEA 653
           L + M   G  P+  TY LL+ C   A
Sbjct: 434 LFREMKAEGCPPNHVTYNLLIDCLIRA 460



 Score =  153 bits (386), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 89/324 (27%), Positives = 150/324 (46%), Gaps = 32/324 (9%)

Query: 357 KHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALD 416
           K D   + T++ I G A       + L    ++G +P   TY+ +I  + +   +   L 
Sbjct: 27  KLDTQLFNTLIHIYGEANMMEKALQTLAAFTKEGGRPTAYTYSSMIQVFMKGGDVQNGLL 86

Query: 417 VFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLG 476
           ++KQM      PD  T+  LID  AKA  ++ A +++  M    +SPD +TY+++I  LG
Sbjct: 87  MYKQMLKAKFVPDHTTFNILIDSLAKADQVEEACNVFGDMFKLNVSPDVYTYTILIRSLG 146

Query: 477 KAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKV 536
             G + A  +LF  M  QGC PNL TY+ ++     A     A  +++ M   G +PD V
Sbjct: 147 TIGRIDAVMKLFESMTAQGCQPNLFTYHSVMHAFGSAGRVDEACDIFQQMVQKGLQPDAV 206

Query: 537 TYSIVMEVLGHCGYLDEA--------------------------------EAVFAEMRRK 564
           TY+I+++  G  G L+ A                                  +F +M+ K
Sbjct: 207 TYNILIDAFGKTGQLERAFDFVGKSRSFTNEVTYNSLLSSLGRKGDIQGLMELFGQMKAK 266

Query: 565 NWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDA 624
             V +E  Y +L++  G AG V   W+ Y  M+   ++ ++ T N++L    + G++  A
Sbjct: 267 GLVSNELTYAILIERLGWAGRVEDVWQLYLEMVDNDIKYDIVTINNVLDCLSKAGRVEAA 326

Query: 625 YHLLQGMLNLGLKPSLQTYTLLLS 648
           + L Q M   GL     TY +L++
Sbjct: 327 FELFQDMKFKGLNADTVTYNILIN 350



 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 98/310 (31%), Positives = 159/310 (51%), Gaps = 12/310 (3%)

Query: 291 FASTGNVVESVSRILRQWKWGPLAEEALGNTNYSMDAYQANQVLKQLQDHTVALGFFNWL 350
           F S G V E+   I +Q     L  +A+   N  +DA+     L++          F+++
Sbjct: 180 FGSAGRVDEACD-IFQQMVQKGLQPDAV-TYNILIDAFGKTGQLERA---------FDFV 228

Query: 351 RRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANY 410
            +   F + E TY +++  LGR      + +L  QM   G   N +TY  LI   G A  
Sbjct: 229 GKSRSFTN-EVTYNSLLSSLGRKGDIQGLMELFGQMKAKGLVSNELTYAILIERLGWAGR 287

Query: 411 LNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSV 470
           + +   ++ +M     + D VT   ++D  +KAG ++ A ++++ M+  GL+ DT TY++
Sbjct: 288 VEDVWQLYLEMVDNDIKYDIVTINNVLDCLSKAGRVEAAFELFQDMKFKGLNADTVTYNI 347

Query: 471 IINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAG 530
           +IN LG+AG L AA  L  EM   GC PN++TYN +I+   K  N  +A +L+ +M+  G
Sbjct: 348 LINGLGRAGKLDAAGALLLEMEENGCAPNIITYNTLISSYGKWSNLSAATRLFLEMKERG 407

Query: 531 FEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAW 590
             P+ V+YS ++E  G  G  D A ++F EM+ +   P+   Y LL+D   +AG    A 
Sbjct: 408 VAPNVVSYSSLIEGFGKAGRTDAAISLFREMKAEGCPPNHVTYNLLIDCLIRAGRFGAAM 467

Query: 591 EWYEAMLQAG 600
           E+   M  AG
Sbjct: 468 EYLREMRDAG 477



 Score =  123 bits (309), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 72/204 (35%), Positives = 116/204 (56%), Gaps = 2/204 (0%)

Query: 357 KHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALD 416
           K+D  T   ++  L +A +  A  +L   M   G   + VTYN LI+  GRA  L+ A  
Sbjct: 304 KYDIVTINNVLDCLSKAGRVEAAFELFQDMKFKGLNADTVTYNILINGLGRAGKLDAAGA 363

Query: 417 VFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLG 476
           +  +M+  GC P+ +TY TLI  + K   L  A  ++ +M+  G++P+  +YS +I   G
Sbjct: 364 LLLEMEENGCAPNIITYNTLISSYGKWSNLSAATRLFLEMKERGVAPNVVSYSSLIEGFG 423

Query: 477 KAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKV 536
           KAG   AA  LF EM  +GC PN VTYN++I    +A  + +A++  R+M++AG +  KV
Sbjct: 424 KAGRTDAAISLFREMKAEGCPPNHVTYNLLIDCLIRAGRFGAAMEYLREMRDAGCQMGKV 483

Query: 537 TYSIVMEVLGHCGYLDEAEAVFAE 560
           T S+++ +     Y++EA++ F E
Sbjct: 484 TKSLLVRIPPQ--YMEEAQSFFQE 505



 Score =  115 bits (288), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 58/155 (37%), Positives = 94/155 (60%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           G   D  TY  ++  LGRA +  A   LL +M  +GC PN++TYN LI SYG+ + L+ A
Sbjct: 337 GLNADTVTYNILINGLGRAGKLDAAGALLLEMEENGCAPNIITYNTLISSYGKWSNLSAA 396

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
             +F +M+  G  P+ V+Y +LI+   KAG  D A+ ++++M+A G  P+  TY+++I+C
Sbjct: 397 TRLFLEMKERGVAPNVVSYSSLIEGFGKAGRTDAAISLFREMKAEGCPPNHVTYNLLIDC 456

Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIAL 509
           L +AG   AA +   EM + GC    VT ++++ +
Sbjct: 457 LIRAGRFGAAMEYLREMRDAGCQMGKVTKSLLVRI 491



 Score = 54.3 bits (129), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 43/210 (20%), Positives = 95/210 (45%), Gaps = 8/210 (3%)

Query: 541 VMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAG 600
           ++ +LG     D+ + +   M++     D  ++  L+ ++G+A  + KA +   A  + G
Sbjct: 1   MLTLLGAARRYDDVQRLVESMQKDRTKLDTQLFNTLIHIYGEANMMEKALQTLAAFTKEG 60

Query: 601 LRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMG 660
            RP   T +S++  F++ G + +   + + ML     P   T+ +L+    +A    +  
Sbjct: 61  GRPTAYTYSSMIQVFMKGGDVQNGLLMYKQMLKAKFVPDHTTFNILIDSLAKADQVEEA- 119

Query: 661 FCH---ELMAVSGHP-AHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRESKRGLVDAV 716
            C+   ++  ++  P  + + + + S G  G+   D V    E M ++  +       +V
Sbjct: 120 -CNVFGDMFKLNVSPDVYTYTILIRSLGTIGR--IDAVMKLFESMTAQGCQPNLFTYHSV 176

Query: 717 VDFLHKSGLKEEAGSVWEVAAQKNVYPDAV 746
           +     +G  +EA  +++   QK + PDAV
Sbjct: 177 MHAFGSAGRVDEACDIFQQMVQKGLQPDAV 206


>gi|357447159|ref|XP_003593855.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355482903|gb|AES64106.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 790

 Score =  185 bits (469), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 115/369 (31%), Positives = 180/369 (48%), Gaps = 13/369 (3%)

Query: 297 VVESVSRILR-QWKWGPLAEEALGNTNYSMDAYQANQVLKQLQDHTVALGFFNWLRRQAG 355
           +V  V R++  +  W P  EE L +   S++      VL+   D  +AL FF W  RQ  
Sbjct: 133 IVREVCRLISLRSNWNPKFEENLRHLLRSLNPRLVCAVLRSQDDERIALDFFYWADRQWR 192

Query: 356 FKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEAL 415
           ++HD   Y TM+ IL + R      ++L  M R G + +   ++ ++ SY RA  L  AL
Sbjct: 193 YRHDAIVYYTMLDILSKTRLCQGARRILRLMTRRGIERSPEAFSYVMVSYSRAGMLRNAL 252

Query: 416 DVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCL 475
            +   MQ  G EPD     T I +  K   L+ A+   ++M+ AG+ PD  +Y+ +I   
Sbjct: 253 RILTLMQKAGVEPDLSICNTAIYVLVKGNKLEKALRFLERMKVAGIEPDIVSYNCLIKGY 312

Query: 476 GKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDM-QNAGFEPD 534
                +  A +L  EM  +GC P+ V+Y  ++A   K R  +   +L  +M QN+   PD
Sbjct: 313 CDVHRIDDALELIAEMPFKGCPPDKVSYYTVMAFLCKDRKVEEVKRLMENMVQNSNLIPD 372

Query: 535 KVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYE 594
           +VTY+ ++  L   G+ D+A     E   K +  D+  Y  +VD + K  N+ KA     
Sbjct: 373 QVTYNTLIYALSKHGHADDALVFLREAEEKGFHIDKVGYSAVVDSFCKNKNIDKAKSLVI 432

Query: 595 AMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEAR 654
            M   G  P+V T  +++  F RVG++ +A  +LQ M   G KP+  TYT+LL+      
Sbjct: 433 DMYSKGCNPDVVTYTAIIDGFCRVGKIDEAKKMLQQMYKHGCKPNTVTYTVLLN------ 486

Query: 655 SPYDMGFCH 663
                G CH
Sbjct: 487 -----GLCH 490



 Score =  129 bits (323), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 94/344 (27%), Positives = 154/344 (44%), Gaps = 11/344 (3%)

Query: 291 FASTGNVVESVSRILRQWKWGPLAEEALGNTNYSMDAYQANQVLKQLQDHTVALGFFNWL 350
           F      VE V R++         E  + N+N   D    N ++  L  H  A     +L
Sbjct: 346 FLCKDRKVEEVKRLM---------ENMVQNSNLIPDQVTYNTLIYALSKHGHADDALVFL 396

Query: 351 RR--QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRA 408
           R   + GF  D+  Y+ +V    + +       L+  M   GC P+VVTY  +I  + R 
Sbjct: 397 REAEEKGFHIDKVGYSAVVDSFCKNKNIDKAKSLVIDMYSKGCNPDVVTYTAIIDGFCRV 456

Query: 409 NYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTY 468
             ++EA  + +QM   GC+P+ VTY  L++     G    A +M    +    +P+  TY
Sbjct: 457 GKIDEAKKMLQQMYKHGCKPNTVTYTVLLNGLCHNGKSLEAREMINVSEEHWWTPNAITY 516

Query: 469 SVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQN 528
           S +++ L + G L  A  L  EM+ +G +PN V  N++I    + +N   A K   +  +
Sbjct: 517 SAVMHGLRREGKLSEACDLTREMIEKGFLPNPVDINLLIQSLCRNQNVVGAKKYLEECLH 576

Query: 529 AGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRK 588
            G   + V ++ V+      G LD A ++  +M   N  PD   Y  L D  GK   + +
Sbjct: 577 KGCAVNVVNFTSVIYGFCQIGDLDAALSMLEDMYLSNKHPDAITYTTLFDALGKKSRLDE 636

Query: 589 AWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGML 632
           A E    ML  G+ P   T  +++  F + G++ D   LL+ M+
Sbjct: 637 ASELIVKMLGKGIDPTPVTYRAVIHRFCQWGRVDDMMKLLEKMI 680



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 85/295 (28%), Positives = 145/295 (49%), Gaps = 11/295 (3%)

Query: 359 DEHTYTTMVGILGRARQFGAINKLLDQMVRDG-CQPNVVTYNRLIHSYGRANYLNEALDV 417
           D+ +Y T++  L + R+   + +L++ MV++    P+ VTYN LI++  +  + ++AL  
Sbjct: 336 DKVSYYTVMAFLCKDRKVEEVKRLMENMVQNSNLIPDQVTYNTLIYALSKHGHADDALVF 395

Query: 418 FKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGK 477
            ++ +  G   D+V Y  ++D   K   +D A  +   M + G +PD  TY+ II+   +
Sbjct: 396 LREAEEKGFHIDKVGYSAVVDSFCKNKNIDKAKSLVIDMYSKGCNPDVVTYTAIIDGFCR 455

Query: 478 AGHLQAAHQLFCEMVNQGCIPNLVTYNIMI-ALQAKARNYQSALKLYRDMQNAGFE---- 532
            G +  A ++  +M   GC PN VTY +++  L    ++ ++     R+M N   E    
Sbjct: 456 VGKIDEAKKMLQQMYKHGCKPNTVTYTVLLNGLCHNGKSLEA-----REMINVSEEHWWT 510

Query: 533 PDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEW 592
           P+ +TYS VM  L   G L EA  +  EM  K ++P+     LL+    +  NV  A ++
Sbjct: 511 PNAITYSAVMHGLRREGKLSEACDLTREMIEKGFLPNPVDINLLIQSLCRNQNVVGAKKY 570

Query: 593 YEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
            E  L  G   NV    S++  F ++G L  A  +L+ M      P   TYT L 
Sbjct: 571 LEECLHKGCAVNVVNFTSVIYGFCQIGDLDAALSMLEDMYLSNKHPDAITYTTLF 625



 Score =  112 bits (279), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 79/331 (23%), Positives = 145/331 (43%), Gaps = 36/331 (10%)

Query: 350 LRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRAN 409
           L ++AG + D     T + +L +  +     + L++M   G +P++V+YN LI  Y   +
Sbjct: 257 LMQKAGVEPDLSICNTAIYVLVKGNKLEKALRFLERMKVAGIEPDIVSYNCLIKGYCDVH 316

Query: 410 YLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKM-QAAGLSPDTFTY 468
            +++AL++  +M   GC PD+V+Y T++    K   ++    + + M Q + L PD  TY
Sbjct: 317 RIDDALELIAEMPFKGCPPDKVSYYTVMAFLCKDRKVEEVKRLMENMVQNSNLIPDQVTY 376

Query: 469 SVIINCLGKAGH-----------------------------------LQAAHQLFCEMVN 493
           + +I  L K GH                                   +  A  L  +M +
Sbjct: 377 NTLIYALSKHGHADDALVFLREAEEKGFHIDKVGYSAVVDSFCKNKNIDKAKSLVIDMYS 436

Query: 494 QGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDE 553
           +GC P++VTY  +I    +      A K+ + M   G +P+ VTY++++  L H G   E
Sbjct: 437 KGCNPDVVTYTAIIDGFCRVGKIDEAKKMLQQMYKHGCKPNTVTYTVLLNGLCHNGKSLE 496

Query: 554 AEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLS 613
           A  +        W P+   Y  ++    + G + +A +    M++ G  PN    N L+ 
Sbjct: 497 AREMINVSEEHWWTPNAITYSAVMHGLRREGKLSEACDLTREMIEKGFLPNPVDINLLIQ 556

Query: 614 AFLRVGQLSDAYHLLQGMLNLGLKPSLQTYT 644
           +  R   +  A   L+  L+ G   ++  +T
Sbjct: 557 SLCRNQNVVGAKKYLEECLHKGCAVNVVNFT 587



 Score = 92.8 bits (229), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 70/276 (25%), Positives = 122/276 (44%), Gaps = 2/276 (0%)

Query: 362 TYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQM 421
           TY+ ++  L R  +      L  +M+  G  PN V  N LI S  R   +  A    ++ 
Sbjct: 515 TYSAVMHGLRREGKLSEACDLTREMIEKGFLPNPVDINLLIQSLCRNQNVVGAKKYLEEC 574

Query: 422 QVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHL 481
              GC  + V + ++I    + G LD A+ M + M  +   PD  TY+ + + LGK   L
Sbjct: 575 LHKGCAVNVVNFTSVIYGFCQIGDLDAALSMLEDMYLSNKHPDAITYTTLFDALGKKSRL 634

Query: 482 QAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIV 541
             A +L  +M+ +G  P  VTY  +I    +       +KL   M     +P K  Y+ V
Sbjct: 635 DEASELIVKMLGKGIDPTPVTYRAVIHRFCQWGRVDDMMKLLEKM--IARQPFKTVYNQV 692

Query: 542 MEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGL 601
           +E L + G  +EAE +  ++ R     D     +L++ +   GN   A++    M +  L
Sbjct: 693 IEKLCYFGNREEAEKLLGKVLRTASKLDAKTCHILIESYLIDGNALSAYKVACQMFRRNL 752

Query: 602 RPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLK 637
            P++  C  +    +  G  ++A  L+   +  G++
Sbjct: 753 IPDLKLCEKVTKKLVLDGMPAEADDLMLRFVERGIQ 788


>gi|302816960|ref|XP_002990157.1| hypothetical protein SELMODRAFT_131102 [Selaginella moellendorffii]
 gi|300142012|gb|EFJ08717.1| hypothetical protein SELMODRAFT_131102 [Selaginella moellendorffii]
          Length = 760

 Score =  185 bits (469), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 149/518 (28%), Positives = 245/518 (47%), Gaps = 33/518 (6%)

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRD-GCQPNVVTYNRLIHSYGRANYL 411
           + G   D+ TY T++    R  Q      L++ M +  G +P+V+TY+ +I  Y +    
Sbjct: 253 ERGIARDDVTYNTLIATYCRGGQMHLGAALMETMAKSSGIEPSVITYSTMIDGYAKLGLA 312

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
           +EA+ +F++M+    EPD + Y T++DIHA+ G  D A  + + M+ AG + D  TY+ +
Sbjct: 313 HEAIALFQEMRNQNVEPDGICYNTMVDIHARLGNFDEAHSIRRAMEEAGFAKDIVTYNAL 372

Query: 472 INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF 531
           ++  GK G  + A  L  EM  +G  PN++TY+ +I    K   ++ A+ L++D++ AG 
Sbjct: 373 LDSYGKQGKFREAMSLLEEMKQRGASPNILTYSALIDAYCKHGFHRDAMALFQDVKKAGL 432

Query: 532 EPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAG-NVRKAW 590
           +PD V YS +++     G  DEA A+  EM      P+   Y  L+D +G+    VRK +
Sbjct: 433 QPDVVLYSTLVDGCCKNGSPDEALALLEEMADNGIRPNVITYNSLLDAYGRQCLMVRKNF 492

Query: 591 EWYEAML----QAGLRPNVP-TCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTL 645
                 L       L+P+V     SL+    +   +  A  + + M   G+KP++ T++ 
Sbjct: 493 PKLRFFLLPRVTMLLKPSVDYDQQSLVDPKQKQALVLAAARVFREMAKNGVKPNVVTFSS 552

Query: 646 LLSCCTEARSPYDMGFCHELMAVSGHPA----HMFLLSMPSPGPDGQNVRDHVGSFLEMM 701
           +L+ C+   S  D     E M V         H  L+     G   +  RD    F E+ 
Sbjct: 553 ILNACSHCASVEDASSLLEAMRVFDGRVYGVTHGLLM-----GFRIRVWRDAETLFNELT 607

Query: 702 ---HSEDRESKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAVKEKGMSYWLINL 758
              H+        L D +  F       E+A    + A  ++V+  A       ++L +L
Sbjct: 608 TLGHNTAVAFYNALTDVLWHF-------EQA----KAAKDRHVWDKAWWHSEQQFFL-DL 655

Query: 759 HVMSDGTAVIALSRTLAWFRKQMLI-SGVGPSRIDIVTGWGRRSRVTGTSLVRQAVQELL 817
           H MS G+A   L   L + RK +     V P  + I+TGWG+ S+V G S V++AV+  L
Sbjct: 656 HFMSVGSAQAMLHLWLLYIRKFLCQRRSVLPKYMSILTGWGKHSKVPGESAVKRAVEAHL 715

Query: 818 HMFSFPFFTENGNSGCFVGCGEPLNKWLLQSYVDRMHL 855
              + PF     N G  V  G  +  WL+ +   R HL
Sbjct: 716 LEMNSPFHVWGNNEGRLVCAGYQVQGWLMDTRTQR-HL 752



 Score =  164 bits (416), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 95/303 (31%), Positives = 163/303 (53%), Gaps = 3/303 (0%)

Query: 347 FNWLRRQAGFKHD-EHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSY 405
           F+W+  Q   +   +   +T++  LGR  +      + D+ V  G   NV  Y+ LI +Y
Sbjct: 107 FDWMVLQQNLRSQWDKVTSTIISSLGRLGRSDWAQLIFDRAVGAGFGNNVFVYSSLICAY 166

Query: 406 GRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDT 465
           GR+  L +A+++F+ M+VV C+P+ V Y  +ID  +K G    A+ ++++M   G+SPD 
Sbjct: 167 GRSGKLAKAVEIFEAMKVV-CKPNLVVYNAVIDACSKGGDYPTALRIFREMLEQGMSPDR 225

Query: 466 FTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRD 525
            T++ +I+  G+A   +   ++F EM  +G   + VTYN +IA   +         L   
Sbjct: 226 ITFNTLISAAGRANRWEECDRIFAEMEERGIARDDVTYNTLIATYCRGGQMHLGAALMET 285

Query: 526 M-QNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAG 584
           M +++G EP  +TYS +++     G   EA A+F EMR +N  PD   Y  +VD+  + G
Sbjct: 286 MAKSSGIEPSVITYSTMIDGYAKLGLAHEAIALFQEMRNQNVEPDGICYNTMVDIHARLG 345

Query: 585 NVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYT 644
           N  +A     AM +AG   ++ T N+LL ++ + G+  +A  LL+ M   G  P++ TY+
Sbjct: 346 NFDEAHSIRRAMEEAGFAKDIVTYNALLDSYGKQGKFREAMSLLEEMKQRGASPNILTYS 405

Query: 645 LLL 647
            L+
Sbjct: 406 ALI 408



 Score =  114 bits (285), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 75/274 (27%), Positives = 124/274 (45%), Gaps = 46/274 (16%)

Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLI 402
           A+  F  +R Q   + D   Y TMV I  R   F   + +   M   G   ++VTYN L+
Sbjct: 315 AIALFQEMRNQ-NVEPDGICYNTMVDIHARLGNFDEAHSIRRAMEEAGFAKDIVTYNALL 373

Query: 403 HSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLS 462
            SYG+     EA+ + ++M+  G  P+ +TY  LID + K GF   AM +++ ++ AGL 
Sbjct: 374 DSYGKQGKFREAMSLLEEMKQRGASPNILTYSALIDAYCKHGFHRDAMALFQDVKKAGLQ 433

Query: 463 PDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKA-----RNYQ 517
           PD   YS +++   K G    A  L  EM + G  PN++TYN ++    +      +N+ 
Sbjct: 434 PDVVLYSTLVDGCCKNGSPDEALALLEEMADNGIRPNVITYNSLLDAYGRQCLMVRKNFP 493

Query: 518 ------------------------------------SALKLYRDMQNAGFEPDKVTYSIV 541
                                               +A +++R+M   G +P+ VT+S +
Sbjct: 494 KLRFFLLPRVTMLLKPSVDYDQQSLVDPKQKQALVLAAARVFREMAKNGVKPNVVTFSSI 553

Query: 542 MEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGL 575
           +    HC  +++A ++   MR    V D  VYG+
Sbjct: 554 LNACSHCASVEDASSLLEAMR----VFDGRVYGV 583


>gi|125591609|gb|EAZ31959.1| hypothetical protein OsJ_16132 [Oryza sativa Japonica Group]
          Length = 756

 Score =  185 bits (469), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 135/479 (28%), Positives = 230/479 (48%), Gaps = 29/479 (6%)

Query: 327 AYQANQVLKQLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQM 386
           A++A +VL ++     AL              DE TY  +V  L RA +  A  K+ D+M
Sbjct: 199 AFKAFEVLDEMSSSGCAL--------------DEGTYELVVPALARAGRIDAARKMFDEM 244

Query: 387 -VRDGC-QPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAG 444
             R+G  + +   Y  L+    +A  L+ A+ ++++M  VG          +++   +AG
Sbjct: 245 RKREGIGRASAGMYGVLVDVLAKAGRLDAAMGMYREMVAVGHRASPAVSTAVVEGLVRAG 304

Query: 445 FLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYN 504
            LD  M+++++M+  GL P    Y++++    ++G L  A QLF +M   G  P   TY 
Sbjct: 305 KLDAGMELWEEMRRGGLRPSFGLYTMVVEANARSGRLDVATQLFGDMEKSGFFPTPATYA 364

Query: 505 IMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRK 564
            ++ + A A    +A++LY  M NAG  P   T++ ++ +L +   LD A  V  EM+  
Sbjct: 365 CLVEMHASAGQVDAAMRLYHSMANAGQRPGLSTFTALLMMLANKRMLDLAAKVLLEMKAS 424

Query: 565 NWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDA 624
            + P E     L+ ++ K G+   A  W   M  AG+R N      L  + ++ G    A
Sbjct: 425 GF-PIEVTASDLLMIYIKEGSTELALRWLRFMGSAGIRTNNFIIRQLFESCMKTGLYDSA 483

Query: 625 YHLLQGMLNLGLKPSLQTYTLLLS----CCTEARSPYDMGFCHELMAVSGHPAHMFLLSM 680
             LL+  +    K  L  YT +L+    C  E R    M    ++++VS H AH F+  +
Sbjct: 484 RPLLETYVAGAAKVDLILYTSILAHLVRCQDEGRERAIM----DILSVSKHKAHDFMCGL 539

Query: 681 PSPGPDGQN--VRDHVGSFLEMMHSEDRES-KRGLVDAVVDFLHKSGLKEEAGSVWEVAA 737
            + GP+ +   V   V  F + +  ++ ES  R  V+ ++++L   G    A  +W+VA 
Sbjct: 540 FT-GPEQRKKPVLSFVREFFQGIDYDNEESAARYFVNVLLNYLVLMGQMNRARCIWKVAY 598

Query: 738 QKNVYPDAVKEKGMSYWLINLHVMSDGTAVIALSRTLAWFRKQMLISGVGPSRIDIVTG 796
           +  ++  A+       W +++  +S G A++A   TL  FRK+ML  GV P RI +VTG
Sbjct: 599 ENKLFAKAIVFDQHIAWSLDVRNLSVGAALVATVHTLHRFRKRMLYYGVVPRRIKLVTG 657


>gi|356556194|ref|XP_003546411.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g18940-like [Glycine max]
          Length = 829

 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 97/302 (32%), Positives = 161/302 (53%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           R  G + DE T +T++   GR        K L ++  +G +P  VTYN ++  +G+A   
Sbjct: 278 RSKGLELDEFTCSTVISACGREGMLDEARKFLAELKFNGYKPGTVTYNSMLQVFGKAGIY 337

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
            EAL + K+M+   C PD VTY  L   + +AGFLD  M +   M + G+ P+  TY+ +
Sbjct: 338 TEALSILKEMEDNNCPPDSVTYNELAATYVRAGFLDEGMAVIDTMTSKGVMPNAITYTTV 397

Query: 472 INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF 531
           I+  GKAG    A +LF  M + GC PN+ TYN ++A+  K    +  +K+  +M+  G 
Sbjct: 398 IDAYGKAGREDDALRLFSLMKDLGCAPNVYTYNSVLAMLGKKSRTEDVIKVLCEMKLNGC 457

Query: 532 EPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWE 591
            P++ T++ ++ V    G  +    V  EM+   + PD+  +  L+  + + G+   + +
Sbjct: 458 APNRATWNTMLAVCSEEGKHNYVNKVLREMKNCGFEPDKDTFNTLISAYARCGSEVDSAK 517

Query: 592 WYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCT 651
            Y  M+++G  P V T N+LL+A  R G    A  ++Q M   G KP+  +Y+LLL C +
Sbjct: 518 MYGEMVKSGFTPCVTTYNALLNALARRGDWKAAESVIQDMRTKGFKPNENSYSLLLHCYS 577

Query: 652 EA 653
           +A
Sbjct: 578 KA 579



 Score =  166 bits (420), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 100/315 (31%), Positives = 154/315 (48%), Gaps = 5/315 (1%)

Query: 343 ALGFFNWLRRQAG----FKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTY 398
           AL  F W     G     + D      MV ILGR  Q    +KL D +  +    +V  Y
Sbjct: 159 ALLLFEWGWLHFGSDQNLRLDNQVVELMVRILGRESQHSIASKLFDLIPVEKYSLDVRAY 218

Query: 399 NRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAG-FLDVAMDMYKKMQ 457
             ++HSY R      A+D+F +M+ +G +P  VTY  ++D++ K G   D  +++  +M+
Sbjct: 219 TTILHSYARTGKYKRAIDLFGKMKEIGLDPTLVTYNVMLDVYGKMGRSWDRILELLDEMR 278

Query: 458 AAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQ 517
           + GL  D FT S +I+  G+ G L  A +   E+   G  P  VTYN M+ +  KA  Y 
Sbjct: 279 SKGLELDEFTCSTVISACGREGMLDEARKFLAELKFNGYKPGTVTYNSMLQVFGKAGIYT 338

Query: 518 SALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLV 577
            AL + ++M++    PD VTY+ +       G+LDE  AV   M  K  +P+   Y  ++
Sbjct: 339 EALSILKEMEDNNCPPDSVTYNELAATYVRAGFLDEGMAVIDTMTSKGVMPNAITYTTVI 398

Query: 578 DLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLK 637
           D +GKAG    A   +  M   G  PNV T NS+L+   +  +  D   +L  M   G  
Sbjct: 399 DAYGKAGREDDALRLFSLMKDLGCAPNVYTYNSVLAMLGKKSRTEDVIKVLCEMKLNGCA 458

Query: 638 PSLQTYTLLLSCCTE 652
           P+  T+  +L+ C+E
Sbjct: 459 PNRATWNTMLAVCSE 473



 Score =  166 bits (420), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 102/363 (28%), Positives = 167/363 (46%), Gaps = 70/363 (19%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           G+K    TY +M+ + G+A  +     +L +M  + C P+ VTYN L  +Y RA +L+E 
Sbjct: 316 GYKPGTVTYNSMLQVFGKAGIYTEALSILKEMEDNNCPPDSVTYNELAATYVRAGFLDEG 375

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
           + V   M   G  P+ +TY T+ID + KAG  D A+ ++  M+  G +P+ +TY+ ++  
Sbjct: 376 MAVIDTMTSKGVMPNAITYTTVIDAYGKAGREDDALRLFSLMKDLGCAPNVYTYNSVLAM 435

Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPD 534
           LGK    +   ++ CEM   GC PN  T+N M+A+ ++   +    K+ R+M+N GFEPD
Sbjct: 436 LGKKSRTEDVIKVLCEMKLNGCAPNRATWNTMLAVCSEEGKHNYVNKVLREMKNCGFEPD 495

Query: 535 KVTYSIVMEVLGHCGY-----------------------------------LDEAEAVFA 559
           K T++ ++     CG                                       AE+V  
Sbjct: 496 KDTFNTLISAYARCGSEVDSAKMYGEMVKSGFTPCVTTYNALLNALARRGDWKAAESVIQ 555

Query: 560 EMRRKNWVPDEPVYGLLVDLWGKAGNVR---------------KAW-------------- 590
           +MR K + P+E  Y LL+  + KAGNV+                +W              
Sbjct: 556 DMRTKGFKPNENSYSLLLHCYSKAGNVKGIEKVEKEIYDGHVFPSWILLRTLVLTNHKCR 615

Query: 591 ------EWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYT 644
                   ++ + + G +P++   NS+LS F R    S A  +L  +   GL+P+L TY 
Sbjct: 616 HLRGMERAFDQLQKYGYKPDLVVINSMLSMFARNKMFSKAREMLHFIHECGLQPNLFTYN 675

Query: 645 LLL 647
            L+
Sbjct: 676 CLM 678



 Score =  138 bits (347), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 99/391 (25%), Positives = 190/391 (48%), Gaps = 9/391 (2%)

Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLI 402
           AL  F+ L +  G   + +TY +++ +LG+  +   + K+L +M  +GC PN  T+N ++
Sbjct: 410 ALRLFS-LMKDLGCAPNVYTYNSVLAMLGKKSRTEDVIKVLCEMKLNGCAPNRATWNTML 468

Query: 403 ---HSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAA 459
                 G+ NY+N+   V ++M+  G EPD+ T+ TLI  +A+ G    +  MY +M  +
Sbjct: 469 AVCSEEGKHNYVNK---VLREMKNCGFEPDKDTFNTLISAYARCGSEVDSAKMYGEMVKS 525

Query: 460 GLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSA 519
           G +P   TY+ ++N L + G  +AA  +  +M  +G  PN  +Y++++   +KA N +  
Sbjct: 526 GFTPCVTTYNALLNALARRGDWKAAESVIQDMRTKGFKPNENSYSLLLHCYSKAGNVKGI 585

Query: 520 LKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDL 579
            K+ +++ +    P  +    ++     C +L   E  F ++++  + PD  V   ++ +
Sbjct: 586 EKVEKEIYDGHVFPSWILLRTLVLTNHKCRHLRGMERAFDQLQKYGYKPDLVVINSMLSM 645

Query: 580 WGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPS 639
           + +     KA E    + + GL+PN+ T N L+  ++R G+   A  +L+G+ N G +P 
Sbjct: 646 FARNKMFSKAREMLHFIHECGLQPNLFTYNCLMDLYVREGECWKAEEVLKGIQNSGPEPD 705

Query: 640 LQTY-TLLLSCCTEARSPYDMGFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFL 698
           + +Y T++   C +      +G   E+      P  +   +  S G  G  + D     +
Sbjct: 706 VVSYNTVIKGFCRKGLMQEAIGVLSEMTTKGIQPTIVTYNTFLS-GYAGMELFDEANEVI 764

Query: 699 EMMHSEDRESKRGLVDAVVDFLHKSGLKEEA 729
             M   +          +VD   K+G  EEA
Sbjct: 765 RFMIEHNCRPSELTYKILVDGYCKAGKYEEA 795



 Score = 99.4 bits (246), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 61/241 (25%), Positives = 111/241 (46%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           R  GFK +E++Y+ ++    +A     I K+  ++      P+ +    L+ +  +  +L
Sbjct: 558 RTKGFKPNENSYSLLLHCYSKAGNVKGIEKVEKEIYDGHVFPSWILLRTLVLTNHKCRHL 617

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
                 F Q+Q  G +PD V   +++ + A+      A +M   +   GL P+ FTY+ +
Sbjct: 618 RGMERAFDQLQKYGYKPDLVVINSMLSMFARNKMFSKAREMLHFIHECGLQPNLFTYNCL 677

Query: 472 INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF 531
           ++   + G    A ++   + N G  P++V+YN +I    +    Q A+ +  +M   G 
Sbjct: 678 MDLYVREGECWKAEEVLKGIQNSGPEPDVVSYNTVIKGFCRKGLMQEAIGVLSEMTTKGI 737

Query: 532 EPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWE 591
           +P  VTY+  +         DEA  V   M   N  P E  Y +LVD + KAG   +A +
Sbjct: 738 QPTIVTYNTFLSGYAGMELFDEANEVIRFMIEHNCRPSELTYKILVDGYCKAGKYEEAMD 797

Query: 592 W 592
           +
Sbjct: 798 F 798



 Score = 97.4 bits (241), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 76/336 (22%), Positives = 138/336 (41%), Gaps = 35/336 (10%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           +  GF+ D+ T+ T++    R        K+  +MV+ G  P V TYN L+++  R    
Sbjct: 488 KNCGFEPDKDTFNTLISAYARCGSEVDSAKMYGEMVKSGFTPCVTTYNALLNALARRGDW 547

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLD----VAMDMYK------------- 454
             A  V + M+  G +P+  +Y  L+  ++KAG +     V  ++Y              
Sbjct: 548 KAAESVIQDMRTKGFKPNENSYSLLLHCYSKAGNVKGIEKVEKEIYDGHVFPSWILLRTL 607

Query: 455 ------------------KMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGC 496
                             ++Q  G  PD    + +++   +      A ++   +   G 
Sbjct: 608 VLTNHKCRHLRGMERAFDQLQKYGYKPDLVVINSMLSMFARNKMFSKAREMLHFIHECGL 667

Query: 497 IPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEA 556
            PNL TYN ++ L  +      A ++ + +QN+G EPD V+Y+ V++     G + EA  
Sbjct: 668 QPNLFTYNCLMDLYVREGECWKAEEVLKGIQNSGPEPDVVSYNTVIKGFCRKGLMQEAIG 727

Query: 557 VFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFL 616
           V +EM  K   P    Y   +  +       +A E    M++   RP+  T   L+  + 
Sbjct: 728 VLSEMTTKGIQPTIVTYNTFLSGYAGMELFDEANEVIRFMIEHNCRPSELTYKILVDGYC 787

Query: 617 RVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTE 652
           + G+  +A   +  +  L +    Q+   L SC  E
Sbjct: 788 KAGKYEEAMDFVSKIKELDISFDDQSVKRLGSCIRE 823



 Score = 43.5 bits (101), Expect = 0.54,   Method: Compositional matrix adjust.
 Identities = 50/244 (20%), Positives = 94/244 (38%), Gaps = 16/244 (6%)

Query: 564 KNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSD 623
           +N   D  V  L+V + G+      A + ++ +       +V    ++L ++ R G+   
Sbjct: 174 QNLRLDNQVVELMVRILGRESQHSIASKLFDLIPVEKYSLDVRAYTTILHSYARTGKYKR 233

Query: 624 AYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYD--MGFCHELMAVSGHPAHMFLLSMP 681
           A  L   M  +GL P+L TY ++L    +    +D  +    E M   G     F  S  
Sbjct: 234 AIDLFGKMKEIGLDPTLVTYNVMLDVYGKMGRSWDRILELLDE-MRSKGLELDEFTCSTV 292

Query: 682 SPGPDGQNVRDHVGSFLEMMHSEDRESKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNV 741
                 + + D    FL  +     +      ++++    K+G+  EA S+ +     N 
Sbjct: 293 ISACGREGMLDEARKFLAELKFNGYKPGTVTYNSMLQVFGKAGIYTEALSILKEMEDNNC 352

Query: 742 YPDAVKEKGMSYWLINLHVMSDGTAVIALSRTLAWFRKQMLISGVGPSRI---DIVTGWG 798
            PD+V    ++   +    + +G AVI            M   GV P+ I    ++  +G
Sbjct: 353 PPDSVTYNELAATYVRAGFLDEGMAVI----------DTMTSKGVMPNAITYTTVIDAYG 402

Query: 799 RRSR 802
           +  R
Sbjct: 403 KAGR 406


>gi|302821741|ref|XP_002992532.1| hypothetical protein SELMODRAFT_135367 [Selaginella moellendorffii]
 gi|300139734|gb|EFJ06470.1| hypothetical protein SELMODRAFT_135367 [Selaginella moellendorffii]
          Length = 759

 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 148/518 (28%), Positives = 245/518 (47%), Gaps = 33/518 (6%)

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRD-GCQPNVVTYNRLIHSYGRANYL 411
           + G   D+ TY T++    R  Q      L++ M +  G +P+V+TY+ +I  Y +    
Sbjct: 252 ERGIARDDVTYNTLIATYCRGGQMHLGAALMETMAKSSGIEPSVITYSTMIDGYAKLGLA 311

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
           +EA+ +F++M+    EPD + Y T++DIHA+ G  D A  + + M+ AG + D  TY+ +
Sbjct: 312 HEAIALFQEMRNQNVEPDGICYNTMVDIHARLGNFDEAHSIRRAMEEAGFAKDIVTYNAL 371

Query: 472 INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF 531
           ++  GK G  + A  L  EM  +G  PN++TY+ +I    K   ++ A+ L++D++ AG 
Sbjct: 372 LDSYGKQGKFREAMSLLEEMKQRGASPNILTYSALIDAYCKHGFHRDAMALFQDVKKAGL 431

Query: 532 EPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAG-NVRKAW 590
           +PD V YS +++     G  DEA A+  EM      P+   Y  L+D +G+    VRK +
Sbjct: 432 QPDVVLYSTLVDGCCKNGSPDEALALLEEMADNGIRPNVITYNSLLDAYGRQCLMVRKTF 491

Query: 591 EWYEAML----QAGLRPNVP-TCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTL 645
                 L       L+P++     SL+    +   +  A  + + M   G+KP++ T++ 
Sbjct: 492 PKLRFFLLPRVTMLLKPSMQDDQQSLVDPKQKQALVLAAARVFREMAKNGVKPNVVTFSS 551

Query: 646 LLSCCTEARSPYDMGFCHELMAVSGHPA----HMFLLSMPSPGPDGQNVRDHVGSFLEMM 701
           +L+ C+   S  D     E M V         H  L+     G   +  RD    F E+ 
Sbjct: 552 ILNACSHCASVEDASNLLEAMRVFDGRVYGVTHGLLM-----GFRIRVWRDAETLFNELT 606

Query: 702 ---HSEDRESKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAVKEKGMSYWLINL 758
              H+        L D +  F       E+A    + A  ++V+  A       ++L +L
Sbjct: 607 TLGHNTAVAFYNALTDVLWHF-------EQA----QAAKDRHVWDKAWWHSEQQFFL-DL 654

Query: 759 HVMSDGTAVIALSRTLAWFRKQMLI-SGVGPSRIDIVTGWGRRSRVTGTSLVRQAVQELL 817
           H MS G+A   L   L + RK +     V P  + I+TGWG+ S+V G S V++AV+  L
Sbjct: 655 HFMSVGSAQAMLHLWLLYIRKFLCQRRSVLPKYMSILTGWGKHSKVPGESAVKRAVEAHL 714

Query: 818 HMFSFPFFTENGNSGCFVGCGEPLNKWLLQSYVDRMHL 855
              + PF     N G  V  G  +  WL+ +   R HL
Sbjct: 715 LEMNSPFHVWGNNEGRLVCAGYQVQGWLMDTRTQR-HL 751



 Score =  164 bits (416), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 95/303 (31%), Positives = 163/303 (53%), Gaps = 3/303 (0%)

Query: 347 FNWLRRQAGFKHD-EHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSY 405
           F+W+  Q   +   +   +T++  LGR  +      + D+ V  G   NV  Y+ LI +Y
Sbjct: 106 FDWMVLQQNLRSQWDKVTSTIISSLGRLGRSDWAQLIFDRAVGAGFGNNVFVYSSLICAY 165

Query: 406 GRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDT 465
           GR+  L +A+++F+ M+VV C+P+ V Y  +ID  +K G    A+ ++++M   G+SPD 
Sbjct: 166 GRSGKLAKAVEIFEAMKVV-CKPNLVVYNAVIDACSKGGDYPTALRIFREMLEQGMSPDR 224

Query: 466 FTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRD 525
            T++ +I+  G+A   +   ++F EM  +G   + VTYN +IA   +         L   
Sbjct: 225 ITFNTLISAAGRANRWEECDRIFAEMEERGIARDDVTYNTLIATYCRGGQMHLGAALMET 284

Query: 526 M-QNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAG 584
           M +++G EP  +TYS +++     G   EA A+F EMR +N  PD   Y  +VD+  + G
Sbjct: 285 MAKSSGIEPSVITYSTMIDGYAKLGLAHEAIALFQEMRNQNVEPDGICYNTMVDIHARLG 344

Query: 585 NVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYT 644
           N  +A     AM +AG   ++ T N+LL ++ + G+  +A  LL+ M   G  P++ TY+
Sbjct: 345 NFDEAHSIRRAMEEAGFAKDIVTYNALLDSYGKQGKFREAMSLLEEMKQRGASPNILTYS 404

Query: 645 LLL 647
            L+
Sbjct: 405 ALI 407



 Score =  114 bits (286), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 76/274 (27%), Positives = 124/274 (45%), Gaps = 46/274 (16%)

Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLI 402
           A+  F  +R Q   + D   Y TMV I  R   F   + +   M   G   ++VTYN L+
Sbjct: 314 AIALFQEMRNQ-NVEPDGICYNTMVDIHARLGNFDEAHSIRRAMEEAGFAKDIVTYNALL 372

Query: 403 HSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLS 462
            SYG+     EA+ + ++M+  G  P+ +TY  LID + K GF   AM +++ ++ AGL 
Sbjct: 373 DSYGKQGKFREAMSLLEEMKQRGASPNILTYSALIDAYCKHGFHRDAMALFQDVKKAGLQ 432

Query: 463 PDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYN------------------ 504
           PD   YS +++   K G    A  L  EM + G  PN++TYN                  
Sbjct: 433 PDVVLYSTLVDGCCKNGSPDEALALLEEMADNGIRPNVITYNSLLDAYGRQCLMVRKTFP 492

Query: 505 ---------IMIALQAKARNYQSAL--------------KLYRDMQNAGFEPDKVTYSIV 541
                    + + L+   ++ Q +L              +++R+M   G +P+ VT+S +
Sbjct: 493 KLRFFLLPRVTMLLKPSMQDDQQSLVDPKQKQALVLAAARVFREMAKNGVKPNVVTFSSI 552

Query: 542 MEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGL 575
           +    HC  +++A  +   MR    V D  VYG+
Sbjct: 553 LNACSHCASVEDASNLLEAMR----VFDGRVYGV 582


>gi|115460498|ref|NP_001053849.1| Os04g0612800 [Oryza sativa Japonica Group]
 gi|38568022|emb|CAE05207.3| OSJNBa0070C17.14 [Oryza sativa Japonica Group]
 gi|113565420|dbj|BAF15763.1| Os04g0612800 [Oryza sativa Japonica Group]
          Length = 784

 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 135/479 (28%), Positives = 230/479 (48%), Gaps = 29/479 (6%)

Query: 327 AYQANQVLKQLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQM 386
           A++A +VL ++     AL              DE TY  +V  L RA +  A  K+ D+M
Sbjct: 242 AFKAFEVLDEMSSSGCAL--------------DEGTYELVVPALARAGRIDAARKMFDEM 287

Query: 387 -VRDGC-QPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAG 444
             R+G  + +   Y  L+    +A  L+ A+ ++++M  VG          +++   +AG
Sbjct: 288 RKREGIGRASAGMYGVLVDVLAKAGRLDAAMGMYREMVAVGHRASPAVSTAVVEGLVRAG 347

Query: 445 FLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYN 504
            LD  M+++++M+  GL P    Y++++    ++G L  A QLF +M   G  P   TY 
Sbjct: 348 KLDAGMELWEEMRRGGLRPSFGLYTMVVEANARSGRLDVATQLFGDMEKSGFFPTPATYA 407

Query: 505 IMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRK 564
            ++ + A A    +A++LY  M NAG  P   T++ ++ +L +   LD A  V  EM+  
Sbjct: 408 CLVEMHASAGQVDAAMRLYHSMANAGQRPGLSTFTALLMMLANKRMLDLAAKVLLEMKAS 467

Query: 565 NWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDA 624
            + P E     L+ ++ K G+   A  W   M  AG+R N      L  + ++ G    A
Sbjct: 468 GF-PIEVTASDLLMIYIKEGSTELALRWLRFMGSAGIRTNNFIIRQLFESCMKTGLYDSA 526

Query: 625 YHLLQGMLNLGLKPSLQTYTLLLS----CCTEARSPYDMGFCHELMAVSGHPAHMFLLSM 680
             LL+  +    K  L  YT +L+    C  E R    M    ++++VS H AH F+  +
Sbjct: 527 RPLLETYVAGAAKVDLILYTSILAHLVRCQDEGRERAIM----DILSVSKHKAHDFMCGL 582

Query: 681 PSPGPDGQN--VRDHVGSFLEMMHSEDRES-KRGLVDAVVDFLHKSGLKEEAGSVWEVAA 737
            + GP+ +   V   V  F + +  ++ ES  R  V+ ++++L   G    A  +W+VA 
Sbjct: 583 FT-GPEQRKKPVLSFVREFFQGIDYDNEESAARYFVNVLLNYLVLMGQMNRARCIWKVAY 641

Query: 738 QKNVYPDAVKEKGMSYWLINLHVMSDGTAVIALSRTLAWFRKQMLISGVGPSRIDIVTG 796
           +  ++  A+       W +++  +S G A++A   TL  FRK+ML  GV P RI +VTG
Sbjct: 642 ENKLFAKAIVFDQHIAWSLDVRNLSVGAALVATVHTLHRFRKRMLYYGVVPRRIKLVTG 700


>gi|297806221|ref|XP_002870994.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297316831|gb|EFH47253.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 819

 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 96/314 (30%), Positives = 163/314 (51%), Gaps = 3/314 (0%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           +  G   D +TY T++    R        ++ ++M   G   + VTYN L+  YG+++  
Sbjct: 271 KSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSHDKVTYNALLDVYGKSHRP 330

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
            EA+ V  +M++ G  P  VTY +LI  +A+ G LD AM++  +M   G  PD FTY+ +
Sbjct: 331 KEAMKVLNEMELNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTL 390

Query: 472 INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF 531
           ++   +AG +++A  +F EM N GC PN+ T+N  I +      +   +K++ ++   G 
Sbjct: 391 LSGFERAGKVESAMNIFEEMRNAGCKPNICTFNAFIKMYGNRGKFVDMMKIFDEINVCGL 450

Query: 532 EPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWE 591
            PD VT++ ++ V G  G   E   VF EM+R  +VP+   +  L+  + + G+  +A  
Sbjct: 451 SPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMT 510

Query: 592 WYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCT 651
            Y  ML AG+ P++ T N++L+A  R G    +  +L  M +   KP+  TY  LL    
Sbjct: 511 VYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYA 570

Query: 652 EARSPYDMGFCHEL 665
             +   ++G  H L
Sbjct: 571 NGK---EIGLMHSL 581



 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 89/310 (28%), Positives = 159/310 (51%), Gaps = 3/310 (0%)

Query: 342 VALGFFNWLRRQAGFKH--DEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYN 399
           +AL  F+W  +Q  ++   D      ++ +LG+  +  +   L + +  DG   +V +Y 
Sbjct: 153 LALCAFDWFMKQKDYQSMLDNSVIAIVISMLGKEGRVSSAANLFNGLQEDGFSLDVYSYT 212

Query: 400 RLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGF-LDVAMDMYKKMQA 458
            LI ++  +    EA++VFK+M+  GC+P  +TY  ++++  K G   +    + +KM++
Sbjct: 213 SLISAFANSGRYREAVNVFKKMEEEGCKPTLITYNVILNVFGKMGTPWNKITSLVEKMKS 272

Query: 459 AGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQS 518
            G++PD +TY+ +I C  +    Q A Q+F EM   G   + VTYN ++ +  K+   + 
Sbjct: 273 DGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSHDKVTYNALLDVYGKSHRPKE 332

Query: 519 ALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVD 578
           A+K+  +M+  GF P  VTY+ ++      G LDEA  +  +M  K   PD   Y  L+ 
Sbjct: 333 AMKVLNEMELNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLS 392

Query: 579 LWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKP 638
            + +AG V  A   +E M  AG +PN+ T N+ +  +   G+  D   +   +   GL P
Sbjct: 393 GFERAGKVESAMNIFEEMRNAGCKPNICTFNAFIKMYGNRGKFVDMMKIFDEINVCGLSP 452

Query: 639 SLQTYTLLLS 648
            + T+  LL+
Sbjct: 453 DIVTWNTLLA 462



 Score =  153 bits (386), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 88/313 (28%), Positives = 161/313 (51%), Gaps = 2/313 (0%)

Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLI 402
           A+  F  +R  AG K +  T+   + + G   +F  + K+ D++   G  P++VT+N L+
Sbjct: 403 AMNIFEEMR-NAGCKPNICTFNAFIKMYGNRGKFVDMMKIFDEINVCGLSPDIVTWNTLL 461

Query: 403 HSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLS 462
             +G+    +E   VFK+M+  G  P+R T+ TLI  +++ G  + AM +Y++M  AG++
Sbjct: 462 AVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVT 521

Query: 463 PDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKL 522
           PD  TY+ ++  L + G  + + ++  EM +  C PN +TY  ++   A  +       L
Sbjct: 522 PDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSL 581

Query: 523 YRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGK 582
             ++ +   EP  V    ++ V   C  L EAE  F+E++ + + PD      +V ++G+
Sbjct: 582 AEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGR 641

Query: 583 AGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQT 642
              V KA E  + M + G  P++ T NSL+    R      +  +L+ +L  G+KP + +
Sbjct: 642 RQMVGKANEVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIIS 701

Query: 643 Y-TLLLSCCTEAR 654
           Y T++ + C   R
Sbjct: 702 YNTVIYAYCRNTR 714



 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 107/405 (26%), Positives = 183/405 (45%), Gaps = 74/405 (18%)

Query: 316 EALGNTNYSMDAYQANQVL---KQLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGR 372
           E + +   + DAY  N ++   K+   H  A   F  ++  AGF HD+ TY  ++ + G+
Sbjct: 268 EKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMK-AAGFSHDKVTYNALLDVYGK 326

Query: 373 ARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVT 432
           + +     K+L++M  +G  P++VTYN LI +Y R   L+EA+++  QM   G +PD  T
Sbjct: 327 SHRPKEAMKVLNEMELNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFT 386

Query: 433 YCTLIDIHAKAGFLDVAMDMYKKMQAA--------------------------------- 459
           Y TL+    +AG ++ AM+++++M+ A                                 
Sbjct: 387 YTTLLSGFERAGKVESAMNIFEEMRNAGCKPNICTFNAFIKMYGNRGKFVDMMKIFDEIN 446

Query: 460 --GLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQ 517
             GLSPD  T++ ++   G+ G       +F EM   G +P   T+N +I+  ++  +++
Sbjct: 447 VCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFE 506

Query: 518 SALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVY---- 573
            A+ +YR M +AG  PD  TY+ V+  L   G  +++E V AEM      P+E  Y    
Sbjct: 507 QAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLL 566

Query: 574 ---------GL----------------------LVDLWGKAGNVRKAWEWYEAMLQAGLR 602
                    GL                      LV +  K   + +A   +  + + G  
Sbjct: 567 HAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFS 626

Query: 603 PNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
           P++ T NS++S + R   +  A  +L  M   G  PS+ TY  L+
Sbjct: 627 PDITTLNSMVSIYGRRQMVGKANEVLDYMKERGFTPSMATYNSLM 671



 Score =  147 bits (370), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 82/307 (26%), Positives = 156/307 (50%), Gaps = 2/307 (0%)

Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLI 402
           A   FN L+ + GF  D ++YT+++     + ++     +  +M  +GC+P ++TYN ++
Sbjct: 192 AANLFNGLQ-EDGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEEEGCKPTLITYNVIL 250

Query: 403 HSYGR-ANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGL 461
           + +G+     N+   + ++M+  G  PD  TY TLI    +      A  ++++M+AAG 
Sbjct: 251 NVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGF 310

Query: 462 SPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALK 521
           S D  TY+ +++  GK+   + A ++  EM   G  P++VTYN +I+  A+      A++
Sbjct: 311 SHDKVTYNALLDVYGKSHRPKEAMKVLNEMELNGFSPSIVTYNSLISAYARDGMLDEAME 370

Query: 522 LYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWG 581
           L   M   G +PD  TY+ ++      G ++ A  +F EMR     P+   +   + ++G
Sbjct: 371 LKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMNIFEEMRNAGCKPNICTFNAFIKMYG 430

Query: 582 KAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQ 641
             G      + ++ +   GL P++ T N+LL+ F + G  S+   + + M   G  P  +
Sbjct: 431 NRGKFVDMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERE 490

Query: 642 TYTLLLS 648
           T+  L+S
Sbjct: 491 TFNTLIS 497



 Score =  117 bits (292), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 67/281 (23%), Positives = 137/281 (48%)

Query: 354 AGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNE 413
           AG   D  TY T++  L R   +    K+L +M    C+PN +TY  L+H+Y     +  
Sbjct: 518 AGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGL 577

Query: 414 ALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIIN 473
              + +++     EP  V   TL+ + +K   L  A   + +++  G SPD  T + +++
Sbjct: 578 MHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVS 637

Query: 474 CLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEP 533
             G+   +  A+++   M  +G  P++ TYN ++ + +++ ++  + ++ R++   G +P
Sbjct: 638 IYGRRQMVGKANEVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILREILAKGIKP 697

Query: 534 DKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWY 593
           D ++Y+ V+        + +A  +F+EMR    VPD   Y   +  +       +A    
Sbjct: 698 DIISYNTVIYAYCRNTRMRDASRIFSEMRDSGIVPDVITYNTFIGSYAADSMFEEAIGVV 757

Query: 594 EAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNL 634
             M++ G RPN  T NS++  + ++ +  +A   ++ + NL
Sbjct: 758 RYMIKHGCRPNQNTYNSIVDGYCKLNRKDEAKLFVEDLRNL 798



 Score =  114 bits (284), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 67/294 (22%), Positives = 137/294 (46%), Gaps = 2/294 (0%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           G   D  T+ T++ + G+      ++ +  +M R G  P   T+N LI +Y R     +A
Sbjct: 449 GLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQA 508

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
           + V+++M   G  PD  TY T++   A+ G  + +  +  +M+     P+  TY  +++ 
Sbjct: 509 MTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHA 568

Query: 475 LGKAGHLQAAHQLFCEMVNQGCI-PNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEP 533
                 +   H L  E V  G I P  V    ++ + +K      A + + +++  GF P
Sbjct: 569 YANGKEIGLMHSL-AEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSP 627

Query: 534 DKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWY 593
           D  T + ++ + G    + +A  V   M+ + + P    Y  L+ +  ++ +  K+ E  
Sbjct: 628 DITTLNSMVSIYGRRQMVGKANEVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEIL 687

Query: 594 EAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
             +L  G++P++ + N+++ A+ R  ++ DA  +   M + G+ P + TY   +
Sbjct: 688 REILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRDSGIVPDVITYNTFI 741



 Score = 97.1 bits (240), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 76/315 (24%), Positives = 133/315 (42%), Gaps = 44/315 (13%)

Query: 370 LGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPD 429
           LG+   +  ++    Q++R   +PN         S      L+E  + FK  +      +
Sbjct: 86  LGKPWSYHGLSPQGQQVLRSLIEPN-------FDSGQLDALLSELFEPFKD-KPESTSSE 137

Query: 430 RVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFC 489
            + +   +  H K      A D + K +      D    +++I+ LGK G + +A  LF 
Sbjct: 138 LLAFLKGLGFHKKFDLALCAFDWFMKQKDYQSMLDNSVIAIVISMLGKEGRVSSAANLFN 197

Query: 490 EMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCG 549
            +   G   ++ +Y  +I+  A +  Y+ A+ +++ M+  G +P  +TY++++ V G  G
Sbjct: 198 GLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEEEGCKPTLITYNVILNVFGKMG 257

Query: 550 ------------------------------------YLDEAEAVFAEMRRKNWVPDEPVY 573
                                                  EA  VF EM+   +  D+  Y
Sbjct: 258 TPWNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSHDKVTY 317

Query: 574 GLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLN 633
             L+D++GK+   ++A +    M   G  P++ T NSL+SA+ R G L +A  L   M  
Sbjct: 318 NALLDVYGKSHRPKEAMKVLNEMELNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAE 377

Query: 634 LGLKPSLQTYTLLLS 648
            G KP + TYT LLS
Sbjct: 378 KGTKPDVFTYTTLLS 392



 Score = 91.3 bits (225), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 48/177 (27%), Positives = 88/177 (49%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           ++ GF  D  T  +MV I GR +  G  N++LD M   G  P++ TYN L++ + R+   
Sbjct: 621 KERGFSPDITTLNSMVSIYGRRQMVGKANEVLDYMKERGFTPSMATYNSLMYMHSRSADF 680

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
            ++ ++ +++   G +PD ++Y T+I  + +   +  A  ++ +M+ +G+ PD  TY+  
Sbjct: 681 GKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRDSGIVPDVITYNTF 740

Query: 472 INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQN 528
           I         + A  +   M+  GC PN  TYN ++    K      A     D++N
Sbjct: 741 IGSYAADSMFEEAIGVVRYMIKHGCRPNQNTYNSIVDGYCKLNRKDEAKLFVEDLRN 797



 Score = 56.6 bits (135), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 39/153 (25%), Positives = 67/153 (43%), Gaps = 1/153 (0%)

Query: 505 IMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRK 564
           I+I++  K     SA  L+  +Q  GF  D  +Y+ ++    + G   EA  VF +M  +
Sbjct: 178 IVISMLGKEGRVSSAANLFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEEE 237

Query: 565 NWVPDEPVYGLLVDLWGKAGNV-RKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSD 623
              P    Y ++++++GK G    K     E M   G+ P+  T N+L++   R     +
Sbjct: 238 GCKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQE 297

Query: 624 AYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSP 656
           A  + + M   G      TY  LL    ++  P
Sbjct: 298 AAQVFEEMKAAGFSHDKVTYNALLDVYGKSHRP 330



 Score = 55.1 bits (131), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 39/160 (24%), Positives = 71/160 (44%), Gaps = 14/160 (8%)

Query: 512 KARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEP 571
           K ++YQS L             D    +IV+ +LG  G +  A  +F  ++   +  D  
Sbjct: 163 KQKDYQSML-------------DNSVIAIVISMLGKEGRVSSAANLFNGLQEDGFSLDVY 209

Query: 572 VYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQ-LSDAYHLLQG 630
            Y  L+  +  +G  R+A   ++ M + G +P + T N +L+ F ++G   +    L++ 
Sbjct: 210 SYTSLISAFANSGRYREAVNVFKKMEEEGCKPTLITYNVILNVFGKMGTPWNKITSLVEK 269

Query: 631 MLNLGLKPSLQTYTLLLSCCTEARSPYDMGFCHELMAVSG 670
           M + G+ P   TY  L++CC       +     E M  +G
Sbjct: 270 MKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAG 309



 Score = 50.4 bits (119), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 27/100 (27%), Positives = 55/100 (55%), Gaps = 2/100 (2%)

Query: 561 MRRKNW--VPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRV 618
           M++K++  + D  V  +++ + GK G V  A   +  + + G   +V +  SL+SAF   
Sbjct: 162 MKQKDYQSMLDNSVIAIVISMLGKEGRVSSAANLFNGLQEDGFSLDVYSYTSLISAFANS 221

Query: 619 GQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYD 658
           G+  +A ++ + M   G KP+L TY ++L+   +  +P++
Sbjct: 222 GRYREAVNVFKKMEEEGCKPTLITYNVILNVFGKMGTPWN 261


>gi|414585491|tpg|DAA36062.1| TPA: hypothetical protein ZEAMMB73_917988 [Zea mays]
 gi|414585492|tpg|DAA36063.1| TPA: hypothetical protein ZEAMMB73_917988 [Zea mays]
          Length = 787

 Score =  183 bits (464), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 130/475 (27%), Positives = 226/475 (47%), Gaps = 21/475 (4%)

Query: 327 AYQANQVLKQLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQM 386
           A++A +VL ++     AL              DE TY   V  L RA +  A  K+ D+M
Sbjct: 245 AFKAFEVLDEMATSGCAL--------------DEGTYQLAVPALARAGRIDAARKMFDEM 290

Query: 387 V-RDGC-QPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAG 444
             R+G  +  V  Y+ ++    +A  L+ A+ ++++M VVG          +++   ++G
Sbjct: 291 KQREGIGRAPVGVYSVMVDVLAKAGRLDAAMGMYREMVVVGHRVSTAVSTAMVEALVRSG 350

Query: 445 FLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYN 504
            LD  M+++++M+  GL P    Y++++    ++G L  A +LF +M   G  P   TY 
Sbjct: 351 KLDAGMELWEEMRRGGLRPSFGLYTMVVEANARSGRLDMAAKLFGDMEKSGFFPTPATYA 410

Query: 505 IMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRK 564
            ++ + A A    +A++LY  M N+G  P   T++ ++ +L +   LD A  V  EM+  
Sbjct: 411 CLVEMHASAGQVDAAMRLYHSMANSGTRPGLSTFTALLTMLANKSLLDLAAKVLLEMKAS 470

Query: 565 NWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDA 624
            + P E     L+ ++ K G+   A  W   M  AG+R N      L  + ++ G    A
Sbjct: 471 GF-PIEVTASDLLMIYIKDGSTDLALRWLRFMGSAGIRTNNFIIRQLFESCMKTGLYDSA 529

Query: 625 YHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGFCHELMAVSGHPAHMFLLSMPSPG 684
             LL+  +    K  L  YT +L+     +         +++  S H AH F+  + + G
Sbjct: 530 RSLLEAYVAGAAKVDLILYTSILAHLVRCQDESSERTIMDILGTSKHKAHDFMCGLFT-G 588

Query: 685 PD--GQNVRDHVGSFLEMMHSEDRES-KRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNV 741
           P+   Q V   V  F + +  ++ ES  R  V+ ++++L   G    A  VW+VA +  +
Sbjct: 589 PEQRKQPVLSFVREFFQGIDYDNEESAARYFVNVLLNYLVLMGQMNRARCVWKVAYENKL 648

Query: 742 YPDAVKEKGMSYWLINLHVMSDGTAVIALSRTLAWFRKQMLISGVGPSRIDIVTG 796
           +  A+       W +++  +S G A++A   TL  FRK+ML  GV P RI +VTG
Sbjct: 649 FAKAIVFDQHIAWSLDVRSLSVGAALVATVHTLHRFRKRMLYYGVVPRRIKLVTG 703



 Score = 94.0 bits (232), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 88/348 (25%), Positives = 153/348 (43%), Gaps = 18/348 (5%)

Query: 397 TYNRLIHSYGRANYLNEALDVFKQMQVV---GCEPDRVTYCTLIDIHAKAGFLDVAMDMY 453
           T+N ++ +      L  A   FK+++ V   G E     Y  L+ +    G    A ++ 
Sbjct: 195 TFNAVVSALATHGLLEPAFYCFKRLRDVSFRGLETP--AYNALLSLLLTRGLAFKAFEVL 252

Query: 454 KKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPN--LVTYNIMIALQA 511
            +M  +G + D  TY + +  L +AG + AA ++F EM  +  I    +  Y++M+ + A
Sbjct: 253 DEMATSGCALDEGTYQLAVPALARAGRIDAARKMFDEMKQREGIGRAPVGVYSVMVDVLA 312

Query: 512 KARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEP 571
           KA    +A+ +YR+M   G        + ++E L   G LD    ++ EMRR    P   
Sbjct: 313 KAGRLDAAMGMYREMVVVGHRVSTAVSTAMVEALVRSGKLDAGMELWEEMRRGGLRPSFG 372

Query: 572 VYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGM 631
           +Y ++V+   ++G +  A + +  M ++G  P   T   L+      GQ+  A  L   M
Sbjct: 373 LYTMVVEANARSGRLDMAAKLFGDMEKSGFFPTPATYACLVEMHASAGQVDAAMRLYHSM 432

Query: 632 LNLGLKPSLQTYTLLLSCCTEARSPYDMGFCHEL-MAVSGHPAHM----FLLSMPSPGPD 686
            N G +P L T+T LL+     +S  D+     L M  SG P  +     L+     G  
Sbjct: 433 ANSGTRPGLSTFTALLTMLAN-KSLLDLAAKVLLEMKASGFPIEVTASDLLMIYIKDGST 491

Query: 687 GQNVRDHVGSFLEMMHSEDRESKRGLVDAVVDFLHKSGLKEEAGSVWE 734
              +R     +L  M S    +   ++  + +   K+GL + A S+ E
Sbjct: 492 DLALR-----WLRFMGSAGIRTNNFIIRQLFESCMKTGLYDSARSLLE 534


>gi|15242557|ref|NP_195906.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75181167|sp|Q9LYZ9.1|PP362_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g02860
 gi|7413561|emb|CAB86040.1| putative protein [Arabidopsis thaliana]
 gi|332003145|gb|AED90528.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 819

 Score =  183 bits (464), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 96/314 (30%), Positives = 162/314 (51%), Gaps = 3/314 (0%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           +  G   D +TY T++    R        ++ ++M   G   + VTYN L+  YG+++  
Sbjct: 271 KSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRP 330

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
            EA+ V  +M + G  P  VTY +LI  +A+ G LD AM++  +M   G  PD FTY+ +
Sbjct: 331 KEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTL 390

Query: 472 INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF 531
           ++   +AG +++A  +F EM N GC PN+ T+N  I +      +   +K++ ++   G 
Sbjct: 391 LSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGL 450

Query: 532 EPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWE 591
            PD VT++ ++ V G  G   E   VF EM+R  +VP+   +  L+  + + G+  +A  
Sbjct: 451 SPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMT 510

Query: 592 WYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCT 651
            Y  ML AG+ P++ T N++L+A  R G    +  +L  M +   KP+  TY  LL    
Sbjct: 511 VYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYA 570

Query: 652 EARSPYDMGFCHEL 665
             +   ++G  H L
Sbjct: 571 NGK---EIGLMHSL 581



 Score =  157 bits (398), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 87/310 (28%), Positives = 159/310 (51%), Gaps = 3/310 (0%)

Query: 342 VALGFFNWLRRQAGFKH--DEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYN 399
           +AL  F+W  +Q  ++   D      ++ +LG+  +  +   + + +  DG   +V +Y 
Sbjct: 153 LALRAFDWFMKQKDYQSMLDNSVVAIIISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYT 212

Query: 400 RLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGF-LDVAMDMYKKMQA 458
            LI ++  +    EA++VFK+M+  GC+P  +TY  ++++  K G   +    + +KM++
Sbjct: 213 SLISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPWNKITSLVEKMKS 272

Query: 459 AGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQS 518
            G++PD +TY+ +I C  +    Q A Q+F EM   G   + VTYN ++ +  K+   + 
Sbjct: 273 DGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKE 332

Query: 519 ALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVD 578
           A+K+  +M   GF P  VTY+ ++      G LDEA  +  +M  K   PD   Y  L+ 
Sbjct: 333 AMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLS 392

Query: 579 LWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKP 638
            + +AG V  A   +E M  AG +PN+ T N+ +  +   G+ ++   +   +   GL P
Sbjct: 393 GFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSP 452

Query: 639 SLQTYTLLLS 648
            + T+  LL+
Sbjct: 453 DIVTWNTLLA 462



 Score =  153 bits (386), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 84/307 (27%), Positives = 159/307 (51%), Gaps = 2/307 (0%)

Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLI 402
           A   FN L+ + GF  D ++YT+++     + ++     +  +M  DGC+P ++TYN ++
Sbjct: 192 AANMFNGLQ-EDGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVIL 250

Query: 403 HSYGRANY-LNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGL 461
           + +G+     N+   + ++M+  G  PD  TY TLI    +      A  ++++M+AAG 
Sbjct: 251 NVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGF 310

Query: 462 SPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALK 521
           S D  TY+ +++  GK+   + A ++  EMV  G  P++VTYN +I+  A+      A++
Sbjct: 311 SYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAME 370

Query: 522 LYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWG 581
           L   M   G +PD  TY+ ++      G ++ A ++F EMR     P+   +   + ++G
Sbjct: 371 LKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYG 430

Query: 582 KAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQ 641
             G   +  + ++ +   GL P++ T N+LL+ F + G  S+   + + M   G  P  +
Sbjct: 431 NRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERE 490

Query: 642 TYTLLLS 648
           T+  L+S
Sbjct: 491 TFNTLIS 497



 Score =  151 bits (382), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 87/313 (27%), Positives = 160/313 (51%), Gaps = 2/313 (0%)

Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLI 402
           A+  F  +R  AG K +  T+   + + G   +F  + K+ D++   G  P++VT+N L+
Sbjct: 403 AMSIFEEMR-NAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLL 461

Query: 403 HSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLS 462
             +G+    +E   VFK+M+  G  P+R T+ TLI  +++ G  + AM +Y++M  AG++
Sbjct: 462 AVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVT 521

Query: 463 PDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKL 522
           PD  TY+ ++  L + G  + + ++  EM +  C PN +TY  ++   A  +       L
Sbjct: 522 PDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSL 581

Query: 523 YRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGK 582
             ++ +   EP  V    ++ V   C  L EAE  F+E++ + + PD      +V ++G+
Sbjct: 582 AEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGR 641

Query: 583 AGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQT 642
              V KA    + M + G  P++ T NSL+    R      +  +L+ +L  G+KP + +
Sbjct: 642 RQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIIS 701

Query: 643 Y-TLLLSCCTEAR 654
           Y T++ + C   R
Sbjct: 702 YNTVIYAYCRNTR 714



 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 107/405 (26%), Positives = 184/405 (45%), Gaps = 74/405 (18%)

Query: 316 EALGNTNYSMDAYQANQVL---KQLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGR 372
           E + +   + DAY  N ++   K+   H  A   F  ++  AGF +D+ TY  ++ + G+
Sbjct: 268 EKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMK-AAGFSYDKVTYNALLDVYGK 326

Query: 373 ARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVT 432
           + +     K+L++MV +G  P++VTYN LI +Y R   L+EA+++  QM   G +PD  T
Sbjct: 327 SHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFT 386

Query: 433 YCTLIDIHAKAGFLDVAMDMYKKMQAA--------------------------------- 459
           Y TL+    +AG ++ AM ++++M+ A                                 
Sbjct: 387 YTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEIN 446

Query: 460 --GLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQ 517
             GLSPD  T++ ++   G+ G       +F EM   G +P   T+N +I+  ++  +++
Sbjct: 447 VCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFE 506

Query: 518 SALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVY---- 573
            A+ +YR M +AG  PD  TY+ V+  L   G  +++E V AEM      P+E  Y    
Sbjct: 507 QAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLL 566

Query: 574 ---------GL----------------------LVDLWGKAGNVRKAWEWYEAMLQAGLR 602
                    GL                      LV +  K   + +A   +  + + G  
Sbjct: 567 HAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFS 626

Query: 603 PNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
           P++ T NS++S + R   ++ A  +L  M   G  PS+ TY  L+
Sbjct: 627 PDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLM 671



 Score =  116 bits (290), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 67/281 (23%), Positives = 136/281 (48%)

Query: 354 AGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNE 413
           AG   D  TY T++  L R   +    K+L +M    C+PN +TY  L+H+Y     +  
Sbjct: 518 AGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGL 577

Query: 414 ALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIIN 473
              + +++     EP  V   TL+ + +K   L  A   + +++  G SPD  T + +++
Sbjct: 578 MHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVS 637

Query: 474 CLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEP 533
             G+   +  A+ +   M  +G  P++ TYN ++ + +++ ++  + ++ R++   G +P
Sbjct: 638 IYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILREILAKGIKP 697

Query: 534 DKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWY 593
           D ++Y+ V+        + +A  +F+EMR    VPD   Y   +  +       +A    
Sbjct: 698 DIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPDVITYNTFIGSYAADSMFEEAIGVV 757

Query: 594 EAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNL 634
             M++ G RPN  T NS++  + ++ +  +A   ++ + NL
Sbjct: 758 RYMIKHGCRPNQNTYNSIVDGYCKLNRKDEAKLFVEDLRNL 798



 Score =  115 bits (289), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 68/294 (23%), Positives = 137/294 (46%), Gaps = 2/294 (0%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           G   D  T+ T++ + G+      ++ +  +M R G  P   T+N LI +Y R     +A
Sbjct: 449 GLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQA 508

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
           + V+++M   G  PD  TY T++   A+ G  + +  +  +M+     P+  TY  +++ 
Sbjct: 509 MTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHA 568

Query: 475 LGKAGHLQAAHQLFCEMVNQGCI-PNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEP 533
                 +   H L  E V  G I P  V    ++ + +K      A + + +++  GF P
Sbjct: 569 YANGKEIGLMHSL-AEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSP 627

Query: 534 DKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWY 593
           D  T + ++ + G    + +A  V   M+ + + P    Y  L+ +  ++ +  K+ E  
Sbjct: 628 DITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEIL 687

Query: 594 EAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
             +L  G++P++ + N+++ A+ R  ++ DA  +   M N G+ P + TY   +
Sbjct: 688 REILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPDVITYNTFI 741



 Score = 97.8 bits (242), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 76/315 (24%), Positives = 135/315 (42%), Gaps = 44/315 (13%)

Query: 370 LGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPD 429
           LG+   +  ++    Q++R   +PN         S    + L+E  + FK  +      +
Sbjct: 86  LGKPWSYHGLSPQGQQVLRSLIEPN-------FDSGQLDSVLSELFEPFKD-KPESTSSE 137

Query: 430 RVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFC 489
            + +   +  H K      A D + K +      D    ++II+ LGK G + +A  +F 
Sbjct: 138 LLAFLKGLGFHKKFDLALRAFDWFMKQKDYQSMLDNSVVAIIISMLGKEGRVSSAANMFN 197

Query: 490 EMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCG 549
            +   G   ++ +Y  +I+  A +  Y+ A+ +++ M+  G +P  +TY++++ V G  G
Sbjct: 198 GLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMG 257

Query: 550 ------------------------------------YLDEAEAVFAEMRRKNWVPDEPVY 573
                                                  EA  VF EM+   +  D+  Y
Sbjct: 258 TPWNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTY 317

Query: 574 GLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLN 633
             L+D++GK+   ++A +    M+  G  P++ T NSL+SA+ R G L +A  L   M  
Sbjct: 318 NALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAE 377

Query: 634 LGLKPSLQTYTLLLS 648
            G KP + TYT LLS
Sbjct: 378 KGTKPDVFTYTTLLS 392



 Score = 88.2 bits (217), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 47/177 (26%), Positives = 86/177 (48%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           ++ GF  D  T  +MV I GR +     N +LD M   G  P++ TYN L++ + R+   
Sbjct: 621 KERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSADF 680

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
            ++ ++ +++   G +PD ++Y T+I  + +   +  A  ++ +M+ +G+ PD  TY+  
Sbjct: 681 GKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPDVITYNTF 740

Query: 472 INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQN 528
           I         + A  +   M+  GC PN  TYN ++    K      A     D++N
Sbjct: 741 IGSYAADSMFEEAIGVVRYMIKHGCRPNQNTYNSIVDGYCKLNRKDEAKLFVEDLRN 797



 Score = 55.8 bits (133), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 55/238 (23%), Positives = 101/238 (42%), Gaps = 15/238 (6%)

Query: 505 IMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRK 564
           I+I++  K     SA  ++  +Q  GF  D  +Y+ ++    + G   EA  VF +M   
Sbjct: 178 IIISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEED 237

Query: 565 NWVPDEPVYGLLVDLWGKAGNV-RKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSD 623
              P    Y ++++++GK G    K     E M   G+ P+  T N+L++   R     +
Sbjct: 238 GCKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQE 297

Query: 624 AYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYD-MGFCHELMAVSGHPAHMFLLSMPS 682
           A  + + M   G      TY  LL    ++  P + M   +E++     P+ +   S+ S
Sbjct: 298 AAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLIS 357

Query: 683 PGPDGQNVRDHVGSFLEMMHSEDRESKRGLVDAVVDF------LHKSGLKEEAGSVWE 734
                   RD  G   E M  +++ +++G    V  +        ++G  E A S++E
Sbjct: 358 -----AYARD--GMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFE 408



 Score = 54.3 bits (129), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 38/160 (23%), Positives = 71/160 (44%), Gaps = 14/160 (8%)

Query: 512 KARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEP 571
           K ++YQS L             D    +I++ +LG  G +  A  +F  ++   +  D  
Sbjct: 163 KQKDYQSML-------------DNSVVAIIISMLGKEGRVSSAANMFNGLQEDGFSLDVY 209

Query: 572 VYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQ-LSDAYHLLQG 630
            Y  L+  +  +G  R+A   ++ M + G +P + T N +L+ F ++G   +    L++ 
Sbjct: 210 SYTSLISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPWNKITSLVEK 269

Query: 631 MLNLGLKPSLQTYTLLLSCCTEARSPYDMGFCHELMAVSG 670
           M + G+ P   TY  L++CC       +     E M  +G
Sbjct: 270 MKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAG 309



 Score = 50.8 bits (120), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 27/100 (27%), Positives = 55/100 (55%), Gaps = 2/100 (2%)

Query: 561 MRRKNW--VPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRV 618
           M++K++  + D  V  +++ + GK G V  A   +  + + G   +V +  SL+SAF   
Sbjct: 162 MKQKDYQSMLDNSVVAIIISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSLISAFANS 221

Query: 619 GQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYD 658
           G+  +A ++ + M   G KP+L TY ++L+   +  +P++
Sbjct: 222 GRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPWN 261


>gi|224126121|ref|XP_002329666.1| predicted protein [Populus trichocarpa]
 gi|222870547|gb|EEF07678.1| predicted protein [Populus trichocarpa]
          Length = 821

 Score =  182 bits (463), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 96/305 (31%), Positives = 161/305 (52%), Gaps = 1/305 (0%)

Query: 344 LGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIH 403
           LG  + +R + G   DE T +T++   GR        +    +   G  P  VTYN L+ 
Sbjct: 265 LGLLDEMRSK-GLGFDEFTCSTVISACGREGLLDEAKEFFVGLKSQGYAPGTVTYNALLQ 323

Query: 404 SYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSP 463
            +G+A   +EAL + K+M+   C PD VTY  L+  + +AGF +    +   M   G+ P
Sbjct: 324 VFGKAGIYSEALSIMKEMEDNNCPPDAVTYNELVAAYVRAGFYEEGAALIDTMTENGIKP 383

Query: 464 DTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLY 523
           +  TY+ +IN  G+A  +  A  L+ +M   GC PN+ TYN ++ +  K    +  +K+ 
Sbjct: 384 NAVTYTTMINAYGRAAQVDKALSLYDQMKESGCAPNVCTYNAILGMLGKKSQSEEMMKIL 443

Query: 524 RDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKA 583
            DM+  G  P+++T++ ++ + G+ G     + VF EM+   + PD   +  L+   G+ 
Sbjct: 444 CDMKVDGCAPNRITWNTMLSMCGNKGMHKYVKRVFQEMKSCGFEPDRDTFNTLITASGRC 503

Query: 584 GNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTY 643
           G+   A + Y+ ML+AG  P+V T N+LL+A  R G    A  +++ M N G KPS  +Y
Sbjct: 504 GSDIDAEKIYDEMLEAGFTPSVATYNALLNALARRGDWRTAESVIKDMKNKGFKPSETSY 563

Query: 644 TLLLS 648
           +L+L+
Sbjct: 564 SLILN 568



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 81/304 (26%), Positives = 163/304 (53%), Gaps = 2/304 (0%)

Query: 346 FFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSY 405
           FF  L+ Q G+     TY  ++ + G+A  +     ++ +M  + C P+ VTYN L+ +Y
Sbjct: 302 FFVGLKSQ-GYAPGTVTYNALLQVFGKAGIYSEALSIMKEMEDNNCPPDAVTYNELVAAY 360

Query: 406 GRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDT 465
            RA +  E   +   M   G +P+ VTY T+I+ + +A  +D A+ +Y +M+ +G +P+ 
Sbjct: 361 VRAGFYEEGAALIDTMTENGIKPNAVTYTTMINAYGRAAQVDKALSLYDQMKESGCAPNV 420

Query: 466 FTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRD 525
            TY+ I+  LGK    +   ++ C+M   GC PN +T+N M+++      ++   +++++
Sbjct: 421 CTYNAILGMLGKKSQSEEMMKILCDMKVDGCAPNRITWNTMLSMCGNKGMHKYVKRVFQE 480

Query: 526 MQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGN 585
           M++ GFEPD+ T++ ++   G CG   +AE ++ EM    + P    Y  L++   + G+
Sbjct: 481 MKSCGFEPDRDTFNTLITASGRCGSDIDAEKIYDEMLEAGFTPSVATYNALLNALARRGD 540

Query: 586 VRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPS-LQTYT 644
            R A    + M   G +P+  + + +L+++ + G +     + + + +  + PS +   T
Sbjct: 541 WRTAESVIKDMKNKGFKPSETSYSLILNSYAKGGYVKGINRIEKDIYDGHIFPSWMLLRT 600

Query: 645 LLLS 648
           L+L+
Sbjct: 601 LILA 604



 Score =  133 bits (334), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 89/354 (25%), Positives = 160/354 (45%), Gaps = 3/354 (0%)

Query: 319 GNTNYSMDAYQ-ANQVLKQLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFG 377
           GN N    A +   ++L +   H++A   F+ +     +  D   YTT++    R  ++ 
Sbjct: 168 GNVNLDNQAVELMARILGRESQHSIASKLFDVIPLD-DYSLDVRAYTTILHSYSRCGKYE 226

Query: 378 AINKLLDQMVRDGCQPNVVTYNRLIHSYGR-ANYLNEALDVFKQMQVVGCEPDRVTYCTL 436
               + ++M   G  P +VTYN ++  YG+     N+ L +  +M+  G   D  T  T+
Sbjct: 227 RAVAIFEKMNESGLSPTLVTYNVMLDVYGKMGRSWNKILGLLDEMRSKGLGFDEFTCSTV 286

Query: 437 IDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGC 496
           I    + G LD A + +  +++ G +P T TY+ ++   GKAG    A  +  EM +  C
Sbjct: 287 ISACGREGLLDEAKEFFVGLKSQGYAPGTVTYNALLQVFGKAGIYSEALSIMKEMEDNNC 346

Query: 497 IPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEA 556
            P+ VTYN ++A   +A  Y+    L   M   G +P+ VTY+ ++   G    +D+A +
Sbjct: 347 PPDAVTYNELVAAYVRAGFYEEGAALIDTMTENGIKPNAVTYTTMINAYGRAAQVDKALS 406

Query: 557 VFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFL 616
           ++ +M+     P+   Y  ++ + GK     +  +    M   G  PN  T N++LS   
Sbjct: 407 LYDQMKESGCAPNVCTYNAILGMLGKKSQSEEMMKILCDMKVDGCAPNRITWNTMLSMCG 466

Query: 617 RVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGFCHELMAVSG 670
             G       + Q M + G +P   T+  L++      S  D    ++ M  +G
Sbjct: 467 NKGMHKYVKRVFQEMKSCGFEPDRDTFNTLITASGRCGSDIDAEKIYDEMLEAG 520



 Score =  129 bits (323), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 88/342 (25%), Positives = 163/342 (47%), Gaps = 15/342 (4%)

Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLI 402
           AL  ++ ++ ++G   +  TY  ++G+LG+  Q   + K+L  M  DGC PN +T+N ++
Sbjct: 404 ALSLYDQMK-ESGCAPNVCTYNAILGMLGKKSQSEEMMKILCDMKVDGCAPNRITWNTML 462

Query: 403 HSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLS 462
              G          VF++M+  G EPDR T+ TLI    + G    A  +Y +M  AG +
Sbjct: 463 SMCGNKGMHKYVKRVFQEMKSCGFEPDRDTFNTLITASGRCGSDIDAEKIYDEMLEAGFT 522

Query: 463 PDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKL 522
           P   TY+ ++N L + G  + A  +  +M N+G  P+  +Y++++   AK    +   ++
Sbjct: 523 PSVATYNALLNALARRGDWRTAESVIKDMKNKGFKPSETSYSLILNSYAKGGYVKGINRI 582

Query: 523 YRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGK 582
            +D+ +    P  +    ++     C  L   E  F  +++  + PD  V+  ++ ++ +
Sbjct: 583 EKDIYDGHIFPSWMLLRTLILANFKCRALAGMERAFQALQKHGYKPDLVVFNSMLSMFSR 642

Query: 583 AGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQT 642
                +A E    + + GL+P++ T NSL+  + R G+   A  +L+ + N G K  L +
Sbjct: 643 KNMHDRAHEIMHLIQECGLQPDLVTYNSLMDLYARGGECWKAEEILRELQNSGDKSDLIS 702

Query: 643 YTLLLSCCTEARSPYDMGFCHELMAVSGHPAHMFLLSMPSPG 684
           Y  ++            GFC + +    H A   L  M S G
Sbjct: 703 YNTVIK-----------GFCRQGLM---HEALRTLSEMISRG 730



 Score =  110 bits (274), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 70/303 (23%), Positives = 139/303 (45%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           +  GF+ D  T+ T++   GR        K+ D+M+  G  P+V TYN L+++  R    
Sbjct: 482 KSCGFEPDRDTFNTLITASGRCGSDIDAEKIYDEMLEAGFTPSVATYNALLNALARRGDW 541

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
             A  V K M+  G +P   +Y  +++ +AK G++     + K +    + P       +
Sbjct: 542 RTAESVIKDMKNKGFKPSETSYSLILNSYAKGGYVKGINRIEKDIYDGHIFPSWMLLRTL 601

Query: 472 INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF 531
           I    K   L    + F  +   G  P+LV +N M+++ ++   +  A ++   +Q  G 
Sbjct: 602 ILANFKCRALAGMERAFQALQKHGYKPDLVVFNSMLSMFSRKNMHDRAHEIMHLIQECGL 661

Query: 532 EPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWE 591
           +PD VTY+ +M++    G   +AE +  E++      D   Y  ++  + + G + +A  
Sbjct: 662 QPDLVTYNSLMDLYARGGECWKAEEILRELQNSGDKSDLISYNTVIKGFCRQGLMHEALR 721

Query: 592 WYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCT 651
               M+  G+RP + T N+ +  +   G  ++   +L  M     +P+  TY +++    
Sbjct: 722 TLSEMISRGIRPCIVTYNTFVGGYAAKGMFAEIDEVLSYMTKHDCRPNELTYKIVVDGYC 781

Query: 652 EAR 654
           +A+
Sbjct: 782 KAK 784



 Score = 86.3 bits (212), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 55/241 (22%), Positives = 111/241 (46%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           +  GFK  E +Y+ ++    +      IN++   +      P+ +    LI +  +   L
Sbjct: 552 KNKGFKPSETSYSLILNSYAKGGYVKGINRIEKDIYDGHIFPSWMLLRTLILANFKCRAL 611

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
                 F+ +Q  G +PD V + +++ + ++    D A ++   +Q  GL PD  TY+ +
Sbjct: 612 AGMERAFQALQKHGYKPDLVVFNSMLSMFSRKNMHDRAHEIMHLIQECGLQPDLVTYNSL 671

Query: 472 INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF 531
           ++   + G    A ++  E+ N G   +L++YN +I    +      AL+   +M + G 
Sbjct: 672 MDLYARGGECWKAEEILRELQNSGDKSDLISYNTVIKGFCRQGLMHEALRTLSEMISRGI 731

Query: 532 EPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWE 591
            P  VTY+  +      G   E + V + M + +  P+E  Y ++VD + KA   ++A +
Sbjct: 732 RPCIVTYNTFVGGYAAKGMFAEIDEVLSYMTKHDCRPNELTYKIVVDGYCKAKKFKEAMD 791

Query: 592 W 592
           +
Sbjct: 792 F 792



 Score = 57.8 bits (138), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 39/170 (22%), Positives = 76/170 (44%), Gaps = 4/170 (2%)

Query: 350 LRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRAN 409
           L ++ G + D  TY +++ +  R  +     ++L ++   G + ++++YN +I  + R  
Sbjct: 655 LIQECGLQPDLVTYNSLMDLYARGGECWKAEEILRELQNSGDKSDLISYNTVIKGFCRQG 714

Query: 410 YLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYS 469
            ++EAL    +M   G  P  VTY T +  +A  G      ++   M      P+  TY 
Sbjct: 715 LMHEALRTLSEMISRGIRPCIVTYNTFVGGYAAKGMFAEIDEVLSYMTKHDCRPNELTYK 774

Query: 470 VIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKAR-NYQS 518
           ++++   KA   + A      + +   I +   Y  M  L ++ R N QS
Sbjct: 775 IVVDGYCKAKKFKEAMDFVSTITD---IDDSFDYQSMRRLSSRVRENMQS 821


>gi|302789998|ref|XP_002976767.1| hypothetical protein SELMODRAFT_105248 [Selaginella moellendorffii]
 gi|300155805|gb|EFJ22436.1| hypothetical protein SELMODRAFT_105248 [Selaginella moellendorffii]
          Length = 669

 Score =  182 bits (462), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 142/607 (23%), Positives = 256/607 (42%), Gaps = 61/607 (10%)

Query: 294 TGNVVESVSRILRQWKWGPL----------------AEEALGNTNYSMDAYQANQVLKQL 337
           TG    S   I R  KW P                  E AL + + S+ A     VL  +
Sbjct: 60  TGESSASAKTIPRYTKWTPQFARVDEVLKIVQKTGNVEAALESWDKSLSAKNIVTVLNNI 119

Query: 338 QDHTVALGFFNWLR-RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPN-- 394
                AL FF WL+ R   ++ + +TY  M+ IL   RQ     KL+++M   G QP+  
Sbjct: 120 NRWEKALAFFEWLKARPELYEINRYTYNVMLKILRNGRQLELSEKLVEEMTGRGIQPDNY 179

Query: 395 ---------------------------------VVTYNRLIHSYGRANYLNEALDVFKQM 421
                                             VTYN +I  YGR   +NEA+++++++
Sbjct: 180 TFSTLINCAKRCRQPEEALKWFERMKSEGIVPDEVTYNSVIDMYGRVGRVNEAVELYEKL 239

Query: 422 QVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHL 481
           + V  + D VTY  + +++A+AG     M + ++M+ +G SP+    + ++  L KAG +
Sbjct: 240 KSVNWKLDTVTYGAIANVYARAGDYQSIMQLVQEMRDSGSSPNAVIMNTLMGTLSKAGKV 299

Query: 482 QAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIV 541
             A ++F EM   G  P  VT +I++ +  +   Y  A ++Y  ++  G++ D   Y+ +
Sbjct: 300 NQAKKVFNEMRTSGVSPTPVTLSILVEMYTRVGAYDQAFEVYETLKTEGWKCDVAVYNSL 359

Query: 542 MEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGL 601
           M+     G +++AE +  EM+R    PD   Y   ++ +   G V  A   ++ ++    
Sbjct: 360 MKACVEGGRVEQAEDILKEMKRAGCNPDHLTYRTAMNTYATKGMVDPARRMFDKVVALNG 419

Query: 602 RPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLG-LKPSLQTYTLLLSCCTEARSPYDMG 660
           +P+ P    ++ A    G++  A  +   M+  G   P  +   +LLSC   A+S  +  
Sbjct: 420 KPDTPLFTVMIRACKLAGEIEQASKIFDEMMESGCCSPDERVSGMLLSCMAMAKSDDERL 479

Query: 661 FCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSE--DRESKRGLVDAVVD 718
              + +     P H  + ++     +    RD V   +E   S+  + +S++ L + ++D
Sbjct: 480 AILDCLDKFNAPLHELMSAIVR--KEEPRSRDEVAEMVEKFISDYPETDSRKPLCNCLID 537

Query: 719 FLHKSGLKEEAGSVWEVAAQKNVYPDAVKEKGMSYWLINLHVMSDGTAVIALSRTLAWFR 778
                G+K  A  ++ +      Y D ++    S W +NL  +S   A  A+   ++  +
Sbjct: 538 ICSSVGMKHAAHKIFAMGVAVGAY-DGLQTNLPSLWRLNLRTLSMPAAECAIEAWVSSLK 596

Query: 779 KQMLISGVGPSRIDIVTGWGRRSRVTGTSLVRQAVQELLHMFSFPFFTENGNSGCFVGCG 838
             +      P  + I TG G   RV     +   V  LL     PF      +G +   G
Sbjct: 597 AAVREGDELPEDLIIETGVG---RVRSGQRLNPIVGTLLKKLGAPFTENTEPAGYYCSTG 653

Query: 839 EPLNKWL 845
             +  W+
Sbjct: 654 AAVEAWI 660


>gi|255555231|ref|XP_002518652.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223542033|gb|EEF43577.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 827

 Score =  182 bits (461), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 90/296 (30%), Positives = 162/296 (54%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           + +G   D++TY T++    R   +    ++ ++M   G  P+ VT+N L+  YG++   
Sbjct: 280 KSSGVAPDDYTYNTLISCCRRGSLYEEAAQVFEEMKLSGFSPDKVTFNTLLDVYGKSRRP 339

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
            EA++V K+M+  G  P  VTY +LI  +A+ G L  AM++  +M   G+ PD FTY+ +
Sbjct: 340 KEAMEVLKEMEFSGFSPSIVTYNSLISAYARDGLLREAMELKDQMVEKGIKPDVFTYTTL 399

Query: 472 INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF 531
           ++   KAG  + A ++F EM   GC PN+ T+N +I +      +   +K++ +++    
Sbjct: 400 LSGFEKAGMDEPAMRIFGEMRAAGCKPNICTFNALIKMHGNRGRFAEMMKVFEEIEICNC 459

Query: 532 EPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWE 591
            PD VT++ ++ V G  G   E   VF EM+R  +VP+   +  L+  + + G+ ++A  
Sbjct: 460 APDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERDTFNTLISAYSRCGSFQQAMA 519

Query: 592 WYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
            Y+ ML+AG+ P++ + N++L+A  R G    +  +   M +   KP+  TY  LL
Sbjct: 520 VYKRMLEAGVTPDLSSYNAVLAALARGGLWEQSEKVFAEMKDGRCKPNELTYCSLL 575



 Score =  147 bits (372), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 87/304 (28%), Positives = 158/304 (51%), Gaps = 2/304 (0%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           R AG K +  T+  ++ + G   +F  + K+ +++    C P++VT+N L+  +G+    
Sbjct: 420 RAAGCKPNICTFNALIKMHGNRGRFAEMMKVFEEIEICNCAPDIVTWNTLLAVFGQNGMD 479

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
           +E   VFK+M+  G  P+R T+ TLI  +++ G    AM +YK+M  AG++PD  +Y+ +
Sbjct: 480 SEVSGVFKEMKRAGFVPERDTFNTLISAYSRCGSFQQAMAVYKRMLEAGVTPDLSSYNAV 539

Query: 472 INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF 531
           +  L + G  + + ++F EM +  C PN +TY  ++   A ++  +    L  ++ +   
Sbjct: 540 LAALARGGLWEQSEKVFAEMKDGRCKPNELTYCSLLHAYANSKEIERMHTLAEEIYSGLT 599

Query: 532 EPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWE 591
           EP  V    ++ V   C  L E E  F E+++K   PD      ++ ++G+   V KA E
Sbjct: 600 EPVPVLLKTLVLVNSKCDLLMETEHAFEELKKKG-SPDLSTLNAMIAIYGRRQMVAKANE 658

Query: 592 WYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTY-TLLLSCC 650
               M ++G  P++ T NSL+    R      +  +L+ +L  GLKP L +Y T++ + C
Sbjct: 659 ILNFMNESGFSPSLATYNSLMYMHSRSENFERSEEVLKEILAKGLKPDLISYNTVIFAYC 718

Query: 651 TEAR 654
              R
Sbjct: 719 RNGR 722



 Score =  147 bits (372), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 87/328 (26%), Positives = 167/328 (50%), Gaps = 3/328 (0%)

Query: 324 SMDAYQANQVLKQLQDHTVALGFFNWLRRQAGFKH--DEHTYTTMVGILGRARQFGAINK 381
           SMD     + L   +   +A+  F+W+R +  F+   +      ++ +LG+  +  A + 
Sbjct: 144 SMDVLGIIKGLGFYKKCDMAMSVFSWVREREDFESVLNCSVVAVIITMLGKEGKVSAASS 203

Query: 382 LLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHA 441
           +L+ + +DG   +V  Y  LI +Y       +A+ VFK+M+  GC+P  +TY  +++++ 
Sbjct: 204 ILNNLRKDGFDLDVYAYTSLITAYASNGRYRDAVLVFKKMEEEGCKPTLITYNVILNVYG 263

Query: 442 KAGF-LDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNL 500
           K G        +   M+++G++PD +TY+ +I+C  +    + A Q+F EM   G  P+ 
Sbjct: 264 KMGMPWSKISGLVHGMKSSGVAPDDYTYNTLISCCRRGSLYEEAAQVFEEMKLSGFSPDK 323

Query: 501 VTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAE 560
           VT+N ++ +  K+R  + A+++ ++M+ +GF P  VTY+ ++      G L EA  +  +
Sbjct: 324 VTFNTLLDVYGKSRRPKEAMEVLKEMEFSGFSPSIVTYNSLISAYARDGLLREAMELKDQ 383

Query: 561 MRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQ 620
           M  K   PD   Y  L+  + KAG    A   +  M  AG +PN+ T N+L+      G+
Sbjct: 384 MVEKGIKPDVFTYTTLLSGFEKAGMDEPAMRIFGEMRAAGCKPNICTFNALIKMHGNRGR 443

Query: 621 LSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
            ++   + + +      P + T+  LL+
Sbjct: 444 FAEMMKVFEEIEICNCAPDIVTWNTLLA 471



 Score =  143 bits (361), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 84/302 (27%), Positives = 155/302 (51%), Gaps = 3/302 (0%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           + +GF  D+ T+ T++ + G++R+     ++L +M   G  P++VTYN LI +Y R   L
Sbjct: 315 KLSGFSPDKVTFNTLLDVYGKSRRPKEAMEVLKEMEFSGFSPSIVTYNSLISAYARDGLL 374

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
            EA+++  QM   G +PD  TY TL+    KAG  + AM ++ +M+AAG  P+  T++ +
Sbjct: 375 REAMELKDQMVEKGIKPDVFTYTTLLSGFEKAGMDEPAMRIFGEMRAAGCKPNICTFNAL 434

Query: 472 INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF 531
           I   G  G      ++F E+    C P++VT+N ++A+  +         ++++M+ AGF
Sbjct: 435 IKMHGNRGRFAEMMKVFEEIEICNCAPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGF 494

Query: 532 EPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWE 591
            P++ T++ ++     CG   +A AV+  M      PD   Y  ++    + G   ++ +
Sbjct: 495 VPERDTFNTLISAYSRCGSFQQAMAVYKRMLEAGVTPDLSSYNAVLAALARGGLWEQSEK 554

Query: 592 WYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPS---LQTYTLLLS 648
            +  M     +PN  T  SLL A+    ++   + L + + +   +P    L+T  L+ S
Sbjct: 555 VFAEMKDGRCKPNELTYCSLLHAYANSKEIERMHTLAEEIYSGLTEPVPVLLKTLVLVNS 614

Query: 649 CC 650
            C
Sbjct: 615 KC 616



 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 77/298 (25%), Positives = 147/298 (49%), Gaps = 1/298 (0%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANY- 410
           R+ GF  D + YT+++       ++     +  +M  +GC+P ++TYN +++ YG+    
Sbjct: 209 RKDGFDLDVYAYTSLITAYASNGRYRDAVLVFKKMEEEGCKPTLITYNVILNVYGKMGMP 268

Query: 411 LNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSV 470
            ++   +   M+  G  PD  TY TLI    +    + A  ++++M+ +G SPD  T++ 
Sbjct: 269 WSKISGLVHGMKSSGVAPDDYTYNTLISCCRRGSLYEEAAQVFEEMKLSGFSPDKVTFNT 328

Query: 471 IINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAG 530
           +++  GK+   + A ++  EM   G  P++VTYN +I+  A+    + A++L   M   G
Sbjct: 329 LLDVYGKSRRPKEAMEVLKEMEFSGFSPSIVTYNSLISAYARDGLLREAMELKDQMVEKG 388

Query: 531 FEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAW 590
            +PD  TY+ ++      G  + A  +F EMR     P+   +  L+ + G  G   +  
Sbjct: 389 IKPDVFTYTTLLSGFEKAGMDEPAMRIFGEMRAAGCKPNICTFNALIKMHGNRGRFAEMM 448

Query: 591 EWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
           + +E +      P++ T N+LL+ F + G  S+   + + M   G  P   T+  L+S
Sbjct: 449 KVFEEIEICNCAPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERDTFNTLIS 506



 Score =  110 bits (275), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 75/328 (22%), Positives = 149/328 (45%), Gaps = 3/328 (0%)

Query: 345 GFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHS 404
           G F  ++R AGF  +  T+ T++    R   F     +  +M+  G  P++ +YN ++ +
Sbjct: 484 GVFKEMKR-AGFVPERDTFNTLISAYSRCGSFQQAMAVYKRMLEAGVTPDLSSYNAVLAA 542

Query: 405 YGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPD 464
             R     ++  VF +M+   C+P+ +TYC+L+  +A +  ++    + +++ +    P 
Sbjct: 543 LARGGLWEQSEKVFAEMKDGRCKPNELTYCSLLHAYANSKEIERMHTLAEEIYSGLTEPV 602

Query: 465 TFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYR 524
                 ++    K   L      F E+  +G  P+L T N MIA+  + +    A ++  
Sbjct: 603 PVLLKTLVLVNSKCDLLMETEHAFEELKKKGS-PDLSTLNAMIAIYGRRQMVAKANEILN 661

Query: 525 DMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAG 584
            M  +GF P   TY+ +M +       + +E V  E+  K   PD   Y  ++  + + G
Sbjct: 662 FMNESGFSPSLATYNSLMYMHSRSENFERSEEVLKEILAKGLKPDLISYNTVIFAYCRNG 721

Query: 585 NVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTY- 643
            ++ A   +  M   GL P+V T N+ ++++       DA  +++ M+  G K +  TY 
Sbjct: 722 RMKDASRIFSYMKTYGLVPDVITYNTFVASYAADSLFEDAIGVVRYMIKHGCKRNQNTYN 781

Query: 644 TLLLSCCTEARSPYDMGFCHELMAVSGH 671
           +++   C  +R    + F   L  +  H
Sbjct: 782 SIVDGYCKHSRRADAIMFVSSLNQLDPH 809



 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 34/133 (25%), Positives = 63/133 (47%), Gaps = 1/133 (0%)

Query: 539 SIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQ 598
           ++++ +LG  G +  A ++   +R+  +  D   Y  L+  +   G  R A   ++ M +
Sbjct: 186 AVIITMLGKEGKVSAASSILNNLRKDGFDLDVYAYTSLITAYASNGRYRDAVLVFKKMEE 245

Query: 599 AGLRPNVPTCNSLLSAFLRVGQ-LSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPY 657
            G +P + T N +L+ + ++G   S    L+ GM + G+ P   TY  L+SCC       
Sbjct: 246 EGCKPTLITYNVILNVYGKMGMPWSKISGLVHGMKSSGVAPDDYTYNTLISCCRRGSLYE 305

Query: 658 DMGFCHELMAVSG 670
           +     E M +SG
Sbjct: 306 EAAQVFEEMKLSG 318



 Score = 42.7 bits (99), Expect = 0.94,   Method: Compositional matrix adjust.
 Identities = 56/253 (22%), Positives = 102/253 (40%), Gaps = 16/253 (6%)

Query: 541 VMEVLGHCGYLDEAEAVFAEMRRKN---WVPDEPVYGLLVDLWGKAGNVRKAWEWYEAML 597
           +++ LG     D A +VF+ +R +     V +  V  +++ + GK G V  A      + 
Sbjct: 150 IIKGLGFYKKCDMAMSVFSWVREREDFESVLNCSVVAVIITMLGKEGKVSAASSILNNLR 209

Query: 598 QAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPY 657
           + G   +V    SL++A+   G+  DA  + + M   G KP+L TY ++L+   +   P+
Sbjct: 210 KDGFDLDVYAYTSLITAYASNGRYRDAVLVFKKMEEEGCKPTLITYNVILNVYGKMGMPW 269

Query: 658 DM--GFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRESKRGLVDA 715
               G  H + +    P      ++ S    G    +    F EM  S     K    + 
Sbjct: 270 SKISGLVHGMKSSGVAPDDYTYNTLISCCRRGSLYEEAAQVFEEMKLSGFSPDKVTF-NT 328

Query: 716 VVDFLHKSGLKEEAGSVWEVAAQKNVYPDAVKEKGMSYWLINLHVMSDGTAVIALSRTLA 775
           ++D   KS   +EA  V +           ++  G S  ++  + +    A   L R   
Sbjct: 329 LLDVYGKSRRPKEAMEVLK----------EMEFSGFSPSIVTYNSLISAYARDGLLREAM 378

Query: 776 WFRKQMLISGVGP 788
             + QM+  G+ P
Sbjct: 379 ELKDQMVEKGIKP 391


>gi|302806555|ref|XP_002985027.1| hypothetical protein SELMODRAFT_11856 [Selaginella moellendorffii]
 gi|300147237|gb|EFJ13902.1| hypothetical protein SELMODRAFT_11856 [Selaginella moellendorffii]
          Length = 443

 Score =  182 bits (461), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 102/325 (31%), Positives = 174/325 (53%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           G   D HTYTT+V  L + ++      L++++  +GC P + TYN L++   +   L EA
Sbjct: 29  GCTIDIHTYTTIVDWLAKNKKIQEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEA 88

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
           +D+ +++   GC PD VTY +LID   K      A  ++K+M + GL+ DT  Y+ +I  
Sbjct: 89  IDLLRKIVDNGCTPDVVTYTSLIDGLGKKKRSFEAYKLFKEMASRGLALDTVCYTALIRG 148

Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPD 534
           L +AG +  A  ++  M +QGC+P++VT + MI    KA    +A+++++ M+  G  P+
Sbjct: 149 LLQAGKIPQASSVYKTMTSQGCVPDVVTLSTMIDGLCKAGRIGAAVRIFKSMEARGLAPN 208

Query: 535 KVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYE 594
           +V YS ++  L     +D A  + A+M++    PD   Y +L+D   K+G+V  A  +++
Sbjct: 209 EVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVAAARAFFD 268

Query: 595 AMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEAR 654
            ML+AG +P+V T N L+S F + G    A  +   M +    P++ TY  L+S   + R
Sbjct: 269 EMLEAGCKPDVYTYNILISGFCKAGNTDAACGVFDDMSSSRCSPNVVTYGTLISGLCKRR 328

Query: 655 SPYDMGFCHELMAVSGHPAHMFLLS 679
                   ++ M   G P   F+ S
Sbjct: 329 QLTKASLYYQHMKERGCPPDSFVYS 353



 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 97/286 (33%), Positives = 141/286 (49%)

Query: 362 TYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQM 421
           TY  ++  L +  +      LL ++V +GC P+VVTY  LI   G+     EA  +FK+M
Sbjct: 71  TYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKKKRSFEAYKLFKEM 130

Query: 422 QVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHL 481
              G   D V Y  LI    +AG +  A  +YK M + G  PD  T S +I+ L KAG +
Sbjct: 131 ASRGLALDTVCYTALIRGLLQAGKIPQASSVYKTMTSQGCVPDVVTLSTMIDGLCKAGRI 190

Query: 482 QAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIV 541
            AA ++F  M  +G  PN V Y+ +I    KAR    AL++   M+ A   PD +TY+I+
Sbjct: 191 GAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNIL 250

Query: 542 MEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGL 601
           ++ L   G +  A A F EM      PD   Y +L+  + KAGN   A   ++ M  +  
Sbjct: 251 IDGLCKSGDVAAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAACGVFDDMSSSRC 310

Query: 602 RPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
            PNV T  +L+S   +  QL+ A    Q M   G  P    Y+ L+
Sbjct: 311 SPNVVTYGTLISGLCKRRQLTKASLYYQHMKERGCPPDSFVYSSLV 356



 Score =  145 bits (365), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 93/293 (31%), Positives = 145/293 (49%), Gaps = 1/293 (0%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           G   D  TYT+++  LG+ ++     KL  +M   G   + V Y  LI    +A  + +A
Sbjct: 99  GCTPDVVTYTSLIDGLGKKKRSFEAYKLFKEMASRGLALDTVCYTALIRGLLQAGKIPQA 158

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
             V+K M   GC PD VT  T+ID   KAG +  A+ ++K M+A GL+P+   YS +I+ 
Sbjct: 159 SSVYKTMTSQGCVPDVVTLSTMIDGLCKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHG 218

Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPD 534
           L KA  +  A ++  +M    C P+ +TYNI+I    K+ +  +A   + +M  AG +PD
Sbjct: 219 LCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVAAARAFFDEMLEAGCKPD 278

Query: 535 KVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYE 594
             TY+I++      G  D A  VF +M      P+   YG L+    K   + KA  +Y+
Sbjct: 279 VYTYNILISGFCKAGNTDAACGVFDDMSSSRCSPNVVTYGTLISGLCKRRQLTKASLYYQ 338

Query: 595 AMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
            M + G  P+    +SL+    + G+L     L   M   G+  S QT T L+
Sbjct: 339 HMKERGCPPDSFVYSSLVDGLCKSGKLEGGCMLFDEMERSGVANS-QTRTRLI 390



 Score =  131 bits (329), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 81/287 (28%), Positives = 139/287 (48%)

Query: 362 TYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQM 421
           T++ ++  L +A      + L  +   +GC  ++ TY  ++    +   + EA+ + +++
Sbjct: 1   TFSILINGLVKAGMLIQAHSLAQETTTNGCTIDIHTYTTIVDWLAKNKKIQEAVALMEKI 60

Query: 422 QVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHL 481
              GC P   TY  L++   K G L+ A+D+ +K+   G +PD  TY+ +I+ LGK    
Sbjct: 61  TANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKKKRS 120

Query: 482 QAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIV 541
             A++LF EM ++G   + V Y  +I    +A     A  +Y+ M + G  PD VT S +
Sbjct: 121 FEAYKLFKEMASRGLALDTVCYTALIRGLLQAGKIPQASSVYKTMTSQGCVPDVVTLSTM 180

Query: 542 MEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGL 601
           ++ L   G +  A  +F  M  +   P+E VY  L+    KA  +  A E    M +A  
Sbjct: 181 IDGLCKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFC 240

Query: 602 RPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
            P+  T N L+    + G ++ A      ML  G KP + TY +L+S
Sbjct: 241 TPDTITYNILIDGLCKSGDVAAARAFFDEMLEAGCKPDVYTYNILIS 287



 Score = 99.8 bits (247), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 63/223 (28%), Positives = 107/223 (47%)

Query: 432 TYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEM 491
           T+  LI+   KAG L  A  + ++    G + D  TY+ I++ L K   +Q A  L  ++
Sbjct: 1   TFSILINGLVKAGMLIQAHSLAQETTTNGCTIDIHTYTTIVDWLAKNKKIQEAVALMEKI 60

Query: 492 VNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYL 551
              GC P + TYN ++    K    + A+ L R + + G  PD VTY+ +++ LG     
Sbjct: 61  TANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKKKRS 120

Query: 552 DEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSL 611
            EA  +F EM  +    D   Y  L+    +AG + +A   Y+ M   G  P+V T +++
Sbjct: 121 FEAYKLFKEMASRGLALDTVCYTALIRGLLQAGKIPQASSVYKTMTSQGCVPDVVTLSTM 180

Query: 612 LSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEAR 654
           +    + G++  A  + + M   GL P+   Y+ L+    +AR
Sbjct: 181 IDGLCKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKAR 223



 Score = 75.9 bits (185), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 54/188 (28%), Positives = 93/188 (49%), Gaps = 3/188 (1%)

Query: 339 DHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTY 398
           D   A  FF+ +  +AG K D +TY  ++    +A    A   + D M    C PNVVTY
Sbjct: 259 DVAAARAFFDEML-EAGCKPDVYTYNILISGFCKAGNTDAACGVFDDMSSSRCSPNVVTY 317

Query: 399 NRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQA 458
             LI    +   L +A   ++ M+  GC PD   Y +L+D   K+G L+    ++ +M+ 
Sbjct: 318 GTLISGLCKRRQLTKASLYYQHMKERGCPPDSFVYSSLVDGLCKSGKLEGGCMLFDEMER 377

Query: 459 AGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQS 518
           +G++ ++ T + +I  L KA  +  A  LF  +  +G +P+   YN +I+   K+     
Sbjct: 378 SGVA-NSQTRTRLIFHLCKANRVDEAVSLFNAIRKEG-MPHPYAYNSIISALIKSGKVNE 435

Query: 519 ALKLYRDM 526
              +Y++M
Sbjct: 436 GQAVYQEM 443


>gi|356518209|ref|XP_003527773.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
           chloroplastic-like [Glycine max]
          Length = 1113

 Score =  181 bits (460), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 122/429 (28%), Positives = 197/429 (45%), Gaps = 40/429 (9%)

Query: 309 KWGPLAEEALGNTNYSMDAYQANQVLKQLQDHTVALGFFNWLRRQA--GFKHDEHTYTTM 366
           +  P A   +    + ++AY  N ++  L             +R    G K    TY+ +
Sbjct: 174 RQAPFALGKMRQAGFVLNAYSYNGLIYFLLQPGFCKEALKVYKRMISEGLKPSMKTYSAL 233

Query: 367 VGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGC 426
           +  LGR R  G I  LL++M   G +PN+ TY   I   GRA  +++A  + K M+  GC
Sbjct: 234 MVALGRRRDTGTIMDLLEEMETLGLRPNIYTYTICIRVLGRAGRIDDAYGILKTMEDEGC 293

Query: 427 EPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQ 486
            PD VTY  LID    AG LD A ++Y KM+A+   PD  TY  +++  G  G L+   +
Sbjct: 294 GPDVVTYTVLIDALCAAGKLDKAKELYTKMRASSHKPDLVTYITLMSKFGNYGDLETVKR 353

Query: 487 LFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLG 546
            + EM   G  P++VTY I++    K+     A  +   M+  G  P+  TY+ ++  L 
Sbjct: 354 FWSEMEADGYAPDVVTYTILVEALCKSGKVDQAFDMLDVMRVRGIVPNLHTYNTLISGLL 413

Query: 547 HCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVP 606
           +   LDEA  +F  M      P    Y L +D +GK G+  KA + +E M + G+ P++ 
Sbjct: 414 NLRRLDEALELFNNMESLGVAPTAYSYVLFIDYYGKLGDPEKALDTFEKMKKRGIMPSIA 473

Query: 607 TCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGFCHELM 666
            CN+ L +   +G++ +A  +   + N GL P   TY +++ C ++A             
Sbjct: 474 ACNASLYSLAEMGRIREAKDIFNDIHNCGLSPDSVTYNMMMKCYSKA------------- 520

Query: 667 AVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRESKRGLVDAVVDFLHKSGLK 726
                               GQ   D     L  M SE  E    +V++++D L+K+G  
Sbjct: 521 --------------------GQ--IDKATKLLTEMLSEGCEPDIIVVNSLIDTLYKAGRV 558

Query: 727 EEAGSVWEV 735
           +EA   W++
Sbjct: 559 DEA---WQM 564



 Score =  159 bits (401), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 120/438 (27%), Positives = 205/438 (46%), Gaps = 28/438 (6%)

Query: 349 WLRRQA-GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGR 407
           W   +A G+  D  TYT +V  L ++ +      +LD M   G  PN+ TYN LI     
Sbjct: 355 WSEMEADGYAPDVVTYTILVEALCKSGKVDQAFDMLDVMRVRGIVPNLHTYNTLISGLLN 414

Query: 408 ANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFT 467
              L+EAL++F  M+ +G  P   +Y   ID + K G  + A+D ++KM+  G+ P    
Sbjct: 415 LRRLDEALELFNNMESLGVAPTAYSYVLFIDYYGKLGDPEKALDTFEKMKKRGIMPSIAA 474

Query: 468 YSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQ 527
            +  +  L + G ++ A  +F ++ N G  P+ VTYN+M+   +KA     A KL  +M 
Sbjct: 475 CNASLYSLAEMGRIREAKDIFNDIHNCGLSPDSVTYNMMMKCYSKAGQIDKATKLLTEML 534

Query: 528 NAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVR 587
           + G EPD +  + +++ L   G +DEA  +F  ++     P    Y +L+   GK G + 
Sbjct: 535 SEGCEPDIIVVNSLIDTLYKAGRVDEAWQMFGRLKDLKLAPTVVTYNILITGLGKEGKLL 594

Query: 588 KAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTY-TLL 646
           KA + + +M ++G  PN  T N+LL    +   +  A  +   M  +   P + TY T++
Sbjct: 595 KALDLFGSMKESGCPPNTVTFNALLDCLCKNDAVDLALKMFCRMTIMNCSPDVLTYNTII 654

Query: 647 LSCCTEARSPYDMGFCHELMAVSGHPAHMFLLS-MPSPGPDGQNVRDHVGSFLEMMHSED 705
                E R+ Y   F H+ M     P H+ L + +P    DG+ V D             
Sbjct: 655 YGLIKEGRAGYAFWFYHQ-MKKFLSPDHVTLYTLLPGVVKDGR-VEDA------------ 700

Query: 706 RESKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAVKEKGMSY--WLINLHVMSD 763
                  +  V++F+H+SGL + +  VW     + +  +A  E+ +S+   L+   +  D
Sbjct: 701 -------IKIVMEFVHQSGL-QTSNQVWG-ELMECILIEAEIEEAISFAEGLVCNSICQD 751

Query: 764 GTAVIALSRTLAWFRKQM 781
              ++ L R L   +K +
Sbjct: 752 DNLILPLIRVLCKQKKAL 769



 Score =  156 bits (395), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 90/303 (29%), Positives = 159/303 (52%), Gaps = 2/303 (0%)

Query: 346  FFNWLRRQAGFKHDEHTYTTMV-GILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHS 404
             F+   +  G      +Y  ++ G+LG      A+ KL  +M   GC PN+ TYN L+ +
Sbjct: 774  LFDKFTKSLGTHPTPESYNCLMDGLLGCNITEAAL-KLFVEMKNAGCCPNIFTYNLLLDA 832

Query: 405  YGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPD 464
            +G++  ++E  +++ +M   GC+P+ +T+  +I    K+  ++ A+D+Y ++ +   SP 
Sbjct: 833  HGKSKRIDELFELYNEMLCRGCKPNIITHNIIISALVKSNSINKALDLYYEIISGDFSPT 892

Query: 465  TFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYR 524
              TY  +I  L KAG  + A ++F EM +  C PN   YNI+I    KA N   A  L++
Sbjct: 893  PCTYGPLIGGLLKAGRSEEAMKIFEEMPDYQCKPNCAIYNILINGFGKAGNVNIACDLFK 952

Query: 525  DMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAG 584
             M   G  PD  +Y+I++E L   G +D+A   F E++     PD   Y L+++  GK+ 
Sbjct: 953  RMIKEGIRPDLKSYTILVECLFMTGRVDDAVHYFEELKLTGLDPDTVSYNLMINGLGKSR 1012

Query: 585  NVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYT 644
             + +A   +  M   G+ P + T N+L+  F   G +  A  + + +  +GL+P++ TY 
Sbjct: 1013 RLEEALSLFSEMKNRGISPELYTYNALILHFGNAGMVDQAGKMFEELQFMGLEPNVFTYN 1072

Query: 645  LLL 647
             L+
Sbjct: 1073 ALI 1075



 Score =  155 bits (393), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 86/299 (28%), Positives = 165/299 (55%)

Query: 352  RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
            + AG   +  TY  ++   G++++   + +L ++M+  GC+PN++T+N +I +  ++N +
Sbjct: 815  KNAGCCPNIFTYNLLLDAHGKSKRIDELFELYNEMLCRGCKPNIITHNIIISALVKSNSI 874

Query: 412  NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
            N+ALD++ ++      P   TY  LI    KAG  + AM ++++M      P+   Y+++
Sbjct: 875  NKALDLYYEIISGDFSPTPCTYGPLIGGLLKAGRSEEAMKIFEEMPDYQCKPNCAIYNIL 934

Query: 472  INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF 531
            IN  GKAG++  A  LF  M+ +G  P+L +Y I++           A+  + +++  G 
Sbjct: 935  INGFGKAGNVNIACDLFKRMIKEGIRPDLKSYTILVECLFMTGRVDDAVHYFEELKLTGL 994

Query: 532  EPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWE 591
            +PD V+Y++++  LG    L+EA ++F+EM+ +   P+   Y  L+  +G AG V +A +
Sbjct: 995  DPDTVSYNLMINGLGKSRRLEEALSLFSEMKNRGISPELYTYNALILHFGNAGMVDQAGK 1054

Query: 592  WYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCC 650
             +E +   GL PNV T N+L+    + G    A+ + + M+ +G  P+  T+  L + C
Sbjct: 1055 MFEELQFMGLEPNVFTYNALIRGHSKSGNKDRAFSVFKKMMIVGCSPNAGTFAQLPNKC 1113



 Score =  155 bits (391), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 94/306 (30%), Positives = 161/306 (52%), Gaps = 11/306 (3%)

Query: 347 FNWLRRQAGFKHDEHTYTTM---VGILGRARQ--FGAINKLLDQMVRDGCQPNVVTYNRL 401
           F+ +++Q     + +TY T+   + I G  RQ  F      L +M + G   N  +YN L
Sbjct: 145 FDLMQKQV-INRNPNTYLTIFKALSIKGGIRQAPFA-----LGKMRQAGFVLNAYSYNGL 198

Query: 402 IHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGL 461
           I+   +  +  EAL V+K+M   G +P   TY  L+    +       MD+ ++M+  GL
Sbjct: 199 IYFLLQPGFCKEALKVYKRMISEGLKPSMKTYSALMVALGRRRDTGTIMDLLEEMETLGL 258

Query: 462 SPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALK 521
            P+ +TY++ I  LG+AG +  A+ +   M ++GC P++VTY ++I     A     A +
Sbjct: 259 RPNIYTYTICIRVLGRAGRIDDAYGILKTMEDEGCGPDVVTYTVLIDALCAAGKLDKAKE 318

Query: 522 LYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWG 581
           LY  M+ +  +PD VTY  +M   G+ G L+  +  ++EM    + PD   Y +LV+   
Sbjct: 319 LYTKMRASSHKPDLVTYITLMSKFGNYGDLETVKRFWSEMEADGYAPDVVTYTILVEALC 378

Query: 582 KAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQ 641
           K+G V +A++  + M   G+ PN+ T N+L+S  L + +L +A  L   M +LG+ P+  
Sbjct: 379 KSGKVDQAFDMLDVMRVRGIVPNLHTYNTLISGLLNLRRLDEALELFNNMESLGVAPTAY 438

Query: 642 TYTLLL 647
           +Y L +
Sbjct: 439 SYVLFI 444



 Score =  137 bits (345), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 93/361 (25%), Positives = 161/361 (44%), Gaps = 37/361 (10%)

Query: 324 SMDAYQANQV-LKQLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKL 382
           SM  Y A  V L + +D    +     +    G + + +TYT  + +LGRA +      +
Sbjct: 226 SMKTYSALMVALGRRRDTGTIMDLLEEME-TLGLRPNIYTYTICIRVLGRAGRIDDAYGI 284

Query: 383 LDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVF------------------------ 418
           L  M  +GC P+VVTY  LI +   A  L++A +++                        
Sbjct: 285 LKTMEDEGCGPDVVTYTVLIDALCAAGKLDKAKELYTKMRASSHKPDLVTYITLMSKFGN 344

Query: 419 -----------KQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFT 467
                       +M+  G  PD VTY  L++   K+G +D A DM   M+  G+ P+  T
Sbjct: 345 YGDLETVKRFWSEMEADGYAPDVVTYTILVEALCKSGKVDQAFDMLDVMRVRGIVPNLHT 404

Query: 468 YSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQ 527
           Y+ +I+ L     L  A +LF  M + G  P   +Y + I    K  + + AL  +  M+
Sbjct: 405 YNTLISGLLNLRRLDEALELFNNMESLGVAPTAYSYVLFIDYYGKLGDPEKALDTFEKMK 464

Query: 528 NAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVR 587
             G  P     +  +  L   G + EA+ +F ++      PD   Y +++  + KAG + 
Sbjct: 465 KRGIMPSIAACNASLYSLAEMGRIREAKDIFNDIHNCGLSPDSVTYNMMMKCYSKAGQID 524

Query: 588 KAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
           KA +    ML  G  P++   NSL+    + G++ +A+ +   + +L L P++ TY +L+
Sbjct: 525 KATKLLTEMLSEGCEPDIIVVNSLIDTLYKAGRVDEAWQMFGRLKDLKLAPTVVTYNILI 584

Query: 648 S 648
           +
Sbjct: 585 T 585



 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 84/327 (25%), Positives = 159/327 (48%)

Query: 419  KQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKA 478
            K  + +G  P   +Y  L+D        + A+ ++ +M+ AG  P+ FTY+++++  GK+
Sbjct: 777  KFTKSLGTHPTPESYNCLMDGLLGCNITEAALKLFVEMKNAGCCPNIFTYNLLLDAHGKS 836

Query: 479  GHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTY 538
              +    +L+ EM+ +GC PN++T+NI+I+   K+ +   AL LY ++ +  F P   TY
Sbjct: 837  KRIDELFELYNEMLCRGCKPNIITHNIIISALVKSNSINKALDLYYEIISGDFSPTPCTY 896

Query: 539  SIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQ 598
              ++  L   G  +EA  +F EM      P+  +Y +L++ +GKAGNV  A + ++ M++
Sbjct: 897  GPLIGGLLKAGRSEEAMKIFEEMPDYQCKPNCAIYNILINGFGKAGNVNIACDLFKRMIK 956

Query: 599  AGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYD 658
             G+RP++ +   L+      G++ DA H  + +   GL P   +Y L+++   ++R   +
Sbjct: 957  EGIRPDLKSYTILVECLFMTGRVDDAVHYFEELKLTGLDPDTVSYNLMINGLGKSRRLEE 1016

Query: 659  MGFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRESKRGLVDAVVD 718
                   M   G    ++  +          + D  G   E +     E      +A++ 
Sbjct: 1017 ALSLFSEMKNRGISPELYTYNALILHFGNAGMVDQAGKMFEELQFMGLEPNVFTYNALIR 1076

Query: 719  FLHKSGLKEEAGSVWEVAAQKNVYPDA 745
               KSG K+ A SV++        P+A
Sbjct: 1077 GHSKSGNKDRAFSVFKKMMIVGCSPNA 1103



 Score =  125 bits (314), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 88/318 (27%), Positives = 147/318 (46%), Gaps = 6/318 (1%)

Query: 334 LKQLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGIL---GRARQFGAINKLLDQMVRDG 390
           LK + D   AL +F  + +     H   T   M+  L   GR      +  L+ + V + 
Sbjct: 96  LKSISDPNSALSYFKMVSQLPNIVHTPETCNYMLEFLRVHGRVEDMAFVFDLMQKQVINR 155

Query: 391 CQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAM 450
             PN  TY  +  +      + +A     +M+  G   +  +Y  LI    + GF   A+
Sbjct: 156 -NPN--TYLTIFKALSIKGGIRQAPFALGKMRQAGFVLNAYSYNGLIYFLLQPGFCKEAL 212

Query: 451 DMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQ 510
            +YK+M + GL P   TYS ++  LG+         L  EM   G  PN+ TY I I + 
Sbjct: 213 KVYKRMISEGLKPSMKTYSALMVALGRRRDTGTIMDLLEEMETLGLRPNIYTYTICIRVL 272

Query: 511 AKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDE 570
            +A     A  + + M++ G  PD VTY+++++ L   G LD+A+ ++ +MR  +  PD 
Sbjct: 273 GRAGRIDDAYGILKTMEDEGCGPDVVTYTVLIDALCAAGKLDKAKELYTKMRASSHKPDL 332

Query: 571 PVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQG 630
             Y  L+  +G  G++     ++  M   G  P+V T   L+ A  + G++  A+ +L  
Sbjct: 333 VTYITLMSKFGNYGDLETVKRFWSEMEADGYAPDVVTYTILVEALCKSGKVDQAFDMLDV 392

Query: 631 MLNLGLKPSLQTYTLLLS 648
           M   G+ P+L TY  L+S
Sbjct: 393 MRVRGIVPNLHTYNTLIS 410



 Score =  113 bits (283), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 107/473 (22%), Positives = 203/473 (42%), Gaps = 17/473 (3%)

Query: 322  NYSMDAYQANQVLKQLQDHTVALGFFNWLRRQ-AGFKHDEHT--YTTMVGILGRARQFGA 378
            N S D    N ++  L     A G+  W   Q   F   +H   YT + G++   R   A
Sbjct: 642  NCSPDVLTYNTIIYGLIKEGRA-GYAFWFYHQMKKFLSPDHVTLYTLLPGVVKDGRVEDA 700

Query: 379  INKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVG--CEPDRVTYCTL 436
            I  +++ + + G Q +   +  L+        + EA+  F +  V    C+ D +    +
Sbjct: 701  IKIVMEFVHQSGLQTSNQVWGELMECILIEAEIEEAIS-FAEGLVCNSICQDDNLILPLI 759

Query: 437  IDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGC 496
              +  +   LD      K  ++ G  P   +Y+ +++ L      +AA +LF EM N GC
Sbjct: 760  RVLCKQKKALDAKKLFDKFTKSLGTHPTPESYNCLMDGLLGCNITEAALKLFVEMKNAGC 819

Query: 497  IPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEA 556
             PN+ TYN+++    K++      +LY +M   G +P+ +T++I++  L     +++A  
Sbjct: 820  CPNIFTYNLLLDAHGKSKRIDELFELYNEMLCRGCKPNIITHNIIISALVKSNSINKALD 879

Query: 557  VFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFL 616
            ++ E+   ++ P    YG L+    KAG   +A + +E M     +PN    N L++ F 
Sbjct: 880  LYYEIISGDFSPTPCTYGPLIGGLLKAGRSEEAMKIFEEMPDYQCKPNCAIYNILINGFG 939

Query: 617  RVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGFCHELMAVSGHPAHMF 676
            + G ++ A  L + M+  G++P L++YT+L+ C        D     E + ++G      
Sbjct: 940  KAGNVNIACDLFKRMIKEGIRPDLKSYTILVECLFMTGRVDDAVHYFEELKLTGLDPDTV 999

Query: 677  LLSMPSPGPDGQNVRDHVGSFLEMMHSEDRESKRGLVDAVVDFLHKSGLKEEAGSVWEVA 736
              ++   G       +   S    M +     +    +A++     +G+ ++AG ++E  
Sbjct: 1000 SYNLMINGLGKSRRLEEALSLFSEMKNRGISPELYTYNALILHFGNAGMVDQAGKMFEEL 1059

Query: 737  AQKNVYPDAVKEKGMSYWLINLHVMSDGTAVIALSRTLAWFRKQMLISGVGPS 789
                + P+          LI  H  S         R  + F+K M+I G  P+
Sbjct: 1060 QFMGLEPNVFTYNA----LIRGHSKSGNK-----DRAFSVFKK-MMIVGCSPN 1102


>gi|357499959|ref|XP_003620268.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495283|gb|AES76486.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 652

 Score =  181 bits (460), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 101/317 (31%), Positives = 163/317 (51%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           GF  D+ +Y T++  L +  +  A   LL ++  +  QPNVV YN +I S  +   +NEA
Sbjct: 185 GFHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMYNTIIDSMCKVKLVNEA 244

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
            D+F +M   G  PD VTY  LI      G L+ A+D++ KM    + PD +T+++++N 
Sbjct: 245 FDLFSEMISKGISPDVVTYSALISGFCILGKLNDAIDLFNKMILENIKPDVYTFNILVNA 304

Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPD 534
             K G ++    +F  M+ QG  PN VTYN ++      +    A  ++  M   G  PD
Sbjct: 305 FCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNPD 364

Query: 535 KVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYE 594
             +YSI++         DEA  +F EM RKN +PD   Y  L+D   K+G +  A +  +
Sbjct: 365 IQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQLVD 424

Query: 595 AMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEAR 654
            M   G+ P + T NS+L A  ++ Q+  A  LL  + + G++P++ TY++L+    ++ 
Sbjct: 425 QMHDRGVPPTIRTYNSILDALCKIHQVDKAIALLTKLKDKGIQPNMYTYSILIKGLCQSG 484

Query: 655 SPYDMGFCHELMAVSGH 671
              D     E + V GH
Sbjct: 485 KLEDARKVFEGLLVKGH 501



 Score =  137 bits (344), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 87/320 (27%), Positives = 157/320 (49%), Gaps = 12/320 (3%)

Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLI 402
           A+  FN L R+         +  ++G L +++ +  +  L  +M   G +PN+V  N LI
Sbjct: 69  AVSLFNRLLRRNT-TPPAFEFNKILGSLVKSKHYHTVLYLSQKMEFRGIKPNLVNCNILI 127

Query: 403 HSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLS 462
           + + +   +  A  VF ++  +G  PD +T+ TLI      G +  A   + K+ A G  
Sbjct: 128 NCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLIKGLCLKGQIQQAFLFHDKVVALGFH 187

Query: 463 PDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKL 522
            D  +Y  +I+ L K G  +AA  L   +      PN+V YN +I    K +    A  L
Sbjct: 188 FDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMYNTIIDSMCKVKLVNEAFDL 247

Query: 523 YRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGK 582
           + +M + G  PD VTYS ++      G L++A  +F +M  +N  PD   + +LV+ + K
Sbjct: 248 FSEMISKGISPDVVTYSALISGFCILGKLNDAIDLFNKMILENIKPDVYTFNILVNAFCK 307

Query: 583 AGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQT 642
            G +++    ++ M++ G++PN  T NSL+  +  V +++ A  +   M   G+ P +Q+
Sbjct: 308 DGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNPDIQS 367

Query: 643 YTLLLSCCTEARSPYDMGFC 662
           Y+++++           GFC
Sbjct: 368 YSIMIN-----------GFC 376



 Score =  130 bits (328), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 83/296 (28%), Positives = 152/296 (51%), Gaps = 6/296 (2%)

Query: 355 GFKHDEHTYTTMVG---ILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           G   D  TY+ ++    ILG+     AI+ L ++M+ +  +P+V T+N L++++ +   +
Sbjct: 255 GISPDVVTYSALISGFCILGKLND--AID-LFNKMILENIKPDVYTFNILVNAFCKDGKM 311

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
            E   VF  M   G +P+ VTY +L+D +     ++ A  ++  M   G++PD  +YS++
Sbjct: 312 KEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNPDIQSYSIM 371

Query: 472 INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF 531
           IN   K      A  LF EM  +  IP++VTY+ +I   +K+     AL+L   M + G 
Sbjct: 372 INGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQLVDQMHDRGV 431

Query: 532 EPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWE 591
            P   TY+ +++ L     +D+A A+  +++ K   P+   Y +L+    ++G +  A +
Sbjct: 432 PPTIRTYNSILDALCKIHQVDKAIALLTKLKDKGIQPNMYTYSILIKGLCQSGKLEDARK 491

Query: 592 WYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
            +E +L  G   NV T   ++  F   G  ++A  LL  M + G  P  +TY +++
Sbjct: 492 VFEGLLVKGHNLNVDTYTIMIQGFCVEGLFNEALALLSKMEDNGCIPDAKTYEIII 547



 Score =  130 bits (326), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 78/302 (25%), Positives = 143/302 (47%), Gaps = 11/302 (3%)

Query: 363 YTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQ 422
           Y T++  + + +       L  +M+  G  P+VVTY+ LI  +     LN+A+D+F +M 
Sbjct: 228 YNTIIDSMCKVKLVNEAFDLFSEMISKGISPDVVTYSALISGFCILGKLNDAIDLFNKMI 287

Query: 423 VVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQ 482
           +   +PD  T+  L++   K G +     ++  M   G+ P+  TY+ +++       + 
Sbjct: 288 LENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVN 347

Query: 483 AAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVM 542
            A  +F  M   G  P++ +Y+IMI    K + +  A+ L+++M      PD VTYS ++
Sbjct: 348 KAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLI 407

Query: 543 EVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLR 602
           + L   G +  A  +  +M  +   P    Y  ++D   K   V KA      +   G++
Sbjct: 408 DGLSKSGRISYALQLVDQMHDRGVPPTIRTYNSILDALCKIHQVDKAIALLTKLKDKGIQ 467

Query: 603 PNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGFC 662
           PN+ T + L+    + G+L DA  + +G+L  G   ++ TYT+++            GFC
Sbjct: 468 PNMYTYSILIKGLCQSGKLEDARKVFEGLLVKGHNLNVDTYTIMIQ-----------GFC 516

Query: 663 HE 664
            E
Sbjct: 517 VE 518



 Score =  129 bits (325), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 83/306 (27%), Positives = 147/306 (48%), Gaps = 4/306 (1%)

Query: 333 VLKQLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQ 392
           +L +L D   A+  FN +  +   K D +T+  +V    +  +      + D M++ G +
Sbjct: 272 ILGKLND---AIDLFNKMILE-NIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIK 327

Query: 393 PNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDM 452
           PN VTYN L+  Y     +N+A  +F  M   G  PD  +Y  +I+   K    D AM++
Sbjct: 328 PNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNL 387

Query: 453 YKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAK 512
           +K+M    + PD  TYS +I+ L K+G +  A QL  +M ++G  P + TYN ++    K
Sbjct: 388 FKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQLVDQMHDRGVPPTIRTYNSILDALCK 447

Query: 513 ARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPV 572
                 A+ L   +++ G +P+  TYSI+++ L   G L++A  VF  +  K    +   
Sbjct: 448 IHQVDKAIALLTKLKDKGIQPNMYTYSILIKGLCQSGKLEDARKVFEGLLVKGHNLNVDT 507

Query: 573 YGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGML 632
           Y +++  +   G   +A      M   G  P+  T   ++ +  +  +   A  LL+ M+
Sbjct: 508 YTIMIQGFCVEGLFNEALALLSKMEDNGCIPDAKTYEIIILSLFKKDENDMAEKLLREMI 567

Query: 633 NLGLKP 638
             G++P
Sbjct: 568 ARGVRP 573



 Score = 97.4 bits (241), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 61/275 (22%), Positives = 133/275 (48%), Gaps = 12/275 (4%)

Query: 394 NVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMY 453
           N ++Y+    ++   N +++A+ +F ++      P    +  ++    K+      + + 
Sbjct: 49  NFISYSSTSTTFHSNNDVDDAVSLFNRLLRRNTTPPAFEFNKILGSLVKSKHYHTVLYLS 108

Query: 454 KKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKA 513
           +KM+  G+ P+    +++INC  + G +  A  +F +++  G +P+ +T+  +I      
Sbjct: 109 QKMEFRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLIKGLCLK 168

Query: 514 RNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRR--KNWV-PDE 570
              Q A   +  +   GF  D+++Y  ++  L   G   E  A    ++R   N V P+ 
Sbjct: 169 GQIQQAFLFHDKVVALGFHFDQISYGTLIHGLCKVG---ETRAALDLLQRVDGNLVQPNV 225

Query: 571 PVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQG 630
            +Y  ++D   K   V +A++ +  M+  G+ P+V T ++L+S F  +G+L+DA  L   
Sbjct: 226 VMYNTIIDSMCKVKLVNEAFDLFSEMISKGISPDVVTYSALISGFCILGKLNDAIDLFNK 285

Query: 631 MLNLGLKPSLQTYTLLLSC------CTEARSPYDM 659
           M+   +KP + T+ +L++         E ++ +DM
Sbjct: 286 MILENIKPDVYTFNILVNAFCKDGKMKEGKTVFDM 320



 Score = 84.7 bits (208), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 57/219 (26%), Positives = 96/219 (43%), Gaps = 35/219 (15%)

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
           Q G   D  +Y+ M+    + ++F     L  +M R    P+VVTY+ LI    ++  ++
Sbjct: 358 QGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRIS 417

Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
            AL +  QM   G  P   TY +++D   K   +D A+ +  K++  G+ P+ +TYS++I
Sbjct: 418 YALQLVDQMHDRGVPPTIRTYNSILDALCKIHQVDKAIALLTKLKDKGIQPNMYTYSILI 477

Query: 473 NCLGKAGHLQAAHQLF-----------------------------------CEMVNQGCI 497
             L ++G L+ A ++F                                    +M + GCI
Sbjct: 478 KGLCQSGKLEDARKVFEGLLVKGHNLNVDTYTIMIQGFCVEGLFNEALALLSKMEDNGCI 537

Query: 498 PNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKV 536
           P+  TY I+I    K      A KL R+M   G  P ++
Sbjct: 538 PDAKTYEIIILSLFKKDENDMAEKLLREMIARGVRPRQI 576


>gi|255548407|ref|XP_002515260.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223545740|gb|EEF47244.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 878

 Score =  181 bits (460), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 131/525 (24%), Positives = 241/525 (45%), Gaps = 42/525 (8%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           G   D  TY T++  + +  Q     +++ +M      PNVVTY+ +I  Y +   L++A
Sbjct: 326 GIDQDIFTYNTLLDAVCKGGQMDLAFEIMSEMPTKNILPNVVTYSTMIDGYAKVGRLDDA 385

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
           L++F +M+ +G   DRV+Y TL+ ++AK G  + A+D+ K+M+ AG+  D  TY+ ++  
Sbjct: 386 LNMFNEMKFLGVGLDRVSYNTLLSVYAKLGRFEQALDVCKEMENAGIRKDVVTYNALLAG 445

Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPD 534
            GK        ++F EM      PNL+TY+ +I + +K   Y+ A++++R+ + AG + D
Sbjct: 446 YGKQYRYDEVRRVFEEMKRGRVSPNLLTYSTLIDVYSKGGLYKEAMEVFREFKQAGLKAD 505

Query: 535 KVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVR------- 587
            V YS +++ L   G ++ +  +  EM ++   P+   Y  ++D +G++ + +       
Sbjct: 506 VVLYSALIDALCKNGLVESSVTLLDEMTKEGIRPNVVTYNSIIDAFGRSASAQCVVDDSG 565

Query: 588 -----KAWEWYEAMLQAGLRPNVPTC--NSLLSAFLRVG-------------QLSDAYHL 627
                +       ++Q  +         N ++  F ++              ++     +
Sbjct: 566 ETTALQVESLSSIVVQEAIESQAADKEDNRIIEIFGKLAAEKACEAKNSGKQEILCILGV 625

Query: 628 LQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGFCHELMAVSGHP----AHMFLLSMPSP 683
            Q M  L +KP++ T++ +L+ C+   S  D     E + +  +     AH  L+     
Sbjct: 626 FQKMHELKIKPNVVTFSAILNACSRCDSFEDASMLLEELRLFDNQVYGVAHGLLMGYR-- 683

Query: 684 GPDGQNVRDHVGSFLEMMHSEDRESKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYP 743
               +NV     S  + +   D  +     +A+ D L   G K  A  V     ++ V+ 
Sbjct: 684 ----ENVWLQAQSLFDEVKLMDSSTASAFYNALTDMLWHFGQKRGAQLVVLEGKRRQVW- 738

Query: 744 DAVKEKGMSYWLINLHVMSDGTAVIALSRTLAWFRKQMLISGVGPSRIDIVTGWGRRSRV 803
               E   S   ++LH+MS G A   +   L   R  +      P  + I+TGWG+ S+V
Sbjct: 739 ----ENIWSDSCLDLHLMSSGAARAMVHAWLLNIRSIVFEGHELPKLLSILTGWGKHSKV 794

Query: 804 TGTSLVRQAVQELLHMFSFPFFTENGNSGCFVGCGEPLNKWLLQS 848
            G S +R+AV+ LL     PF     N G F+  G  +  WL +S
Sbjct: 795 VGDSALRRAVEALLIGMGAPFRLAKCNLGRFISTGSVVAAWLKES 839



 Score =  155 bits (391), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 87/287 (30%), Positives = 150/287 (52%), Gaps = 1/287 (0%)

Query: 362 TYTTMVGILGRAR-QFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQ 420
           TY  ++   G+   +F  + ++ D M+ +G QP+ +T+N L+    R      A  +F  
Sbjct: 262 TYNAVIDACGKGGVEFKKVVEIFDGMLSNGVQPDRITFNSLLAVCSRGGLWEAARRLFSA 321

Query: 421 MQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGH 480
           M   G + D  TY TL+D   K G +D+A ++  +M    + P+  TYS +I+   K G 
Sbjct: 322 MVDKGIDQDIFTYNTLLDAVCKGGQMDLAFEIMSEMPTKNILPNVVTYSTMIDGYAKVGR 381

Query: 481 LQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSI 540
           L  A  +F EM   G   + V+YN ++++ AK   ++ AL + ++M+NAG   D VTY+ 
Sbjct: 382 LDDALNMFNEMKFLGVGLDRVSYNTLLSVYAKLGRFEQALDVCKEMENAGIRKDVVTYNA 441

Query: 541 VMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAG 600
           ++   G     DE   VF EM+R    P+   Y  L+D++ K G  ++A E +    QAG
Sbjct: 442 LLAGYGKQYRYDEVRRVFEEMKRGRVSPNLLTYSTLIDVYSKGGLYKEAMEVFREFKQAG 501

Query: 601 LRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
           L+ +V   ++L+ A  + G +  +  LL  M   G++P++ TY  ++
Sbjct: 502 LKADVVLYSALIDALCKNGLVESSVTLLDEMTKEGIRPNVVTYNSII 548



 Score =  145 bits (366), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 78/263 (29%), Positives = 136/263 (51%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           G + D  T+ +++ +  R   + A  +L   MV  G   ++ TYN L+ +  +   ++ A
Sbjct: 291 GVQPDRITFNSLLAVCSRGGLWEAARRLFSAMVDKGIDQDIFTYNTLLDAVCKGGQMDLA 350

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
            ++  +M      P+ VTY T+ID +AK G LD A++M+ +M+  G+  D  +Y+ +++ 
Sbjct: 351 FEIMSEMPTKNILPNVVTYSTMIDGYAKVGRLDDALNMFNEMKFLGVGLDRVSYNTLLSV 410

Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPD 534
             K G  + A  +  EM N G   ++VTYN ++A   K   Y    +++ +M+     P+
Sbjct: 411 YAKLGRFEQALDVCKEMENAGIRKDVVTYNALLAGYGKQYRYDEVRRVFEEMKRGRVSPN 470

Query: 535 KVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYE 594
            +TYS +++V    G   EA  VF E ++     D  +Y  L+D   K G V  +    +
Sbjct: 471 LLTYSTLIDVYSKGGLYKEAMEVFREFKQAGLKADVVLYSALIDALCKNGLVESSVTLLD 530

Query: 595 AMLQAGLRPNVPTCNSLLSAFLR 617
            M + G+RPNV T NS++ AF R
Sbjct: 531 EMTKEGIRPNVVTYNSIIDAFGR 553



 Score =  115 bits (288), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 69/300 (23%), Positives = 143/300 (47%), Gaps = 36/300 (12%)

Query: 350 LRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRAN 409
           +RR++G        + M+  LGR  +      + D  +++G    V  ++ LI +YGR+ 
Sbjct: 180 VRRESGKNEQGKLASAMISTLGRLGKVELAKAVFDTALKEGYGKTVYAFSALISAYGRS- 238

Query: 410 YLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYS 469
                                             G+ + A+ ++  M++ GL P+  TY+
Sbjct: 239 ----------------------------------GYCNEAIKVFDSMKSNGLMPNLVTYN 264

Query: 470 VIINCLGKAG-HLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQN 528
            +I+  GK G   +   ++F  M++ G  P+ +T+N ++A+ ++   +++A +L+  M +
Sbjct: 265 AVIDACGKGGVEFKKVVEIFDGMLSNGVQPDRITFNSLLAVCSRGGLWEAARRLFSAMVD 324

Query: 529 AGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRK 588
            G + D  TY+ +++ +   G +D A  + +EM  KN +P+   Y  ++D + K G +  
Sbjct: 325 KGIDQDIFTYNTLLDAVCKGGQMDLAFEIMSEMPTKNILPNVVTYSTMIDGYAKVGRLDD 384

Query: 589 AWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
           A   +  M   G+  +  + N+LLS + ++G+   A  + + M N G++  + TY  LL+
Sbjct: 385 ALNMFNEMKFLGVGLDRVSYNTLLSVYAKLGRFEQALDVCKEMENAGIRKDVVTYNALLA 444



 Score = 90.1 bits (222), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 56/255 (21%), Positives = 115/255 (45%), Gaps = 43/255 (16%)

Query: 354 AGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNE 413
           AG + D  TY  ++   G+  ++  + ++ ++M R    PN++TY+ LI  Y +     E
Sbjct: 430 AGIRKDVVTYNALLAGYGKQYRYDEVRRVFEEMKRGRVSPNLLTYSTLIDVYSKGGLYKE 489

Query: 414 ALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIIN 473
           A++VF++ +  G + D V Y  LID   K G ++ ++ +  +M   G+ P+  TY+ II+
Sbjct: 490 AMEVFREFKQAGLKADVVLYSALIDALCKNGLVESSVTLLDEMTKEGIRPNVVTYNSIID 549

Query: 474 CLGKAGHLQAAHQLFCEMVNQG-----CIPNLVTYNIMIALQAKARNYQS---------- 518
             G++   Q      C + + G      + +L +  +  A++++A + +           
Sbjct: 550 AFGRSASAQ------CVVDDSGETTALQVESLSSIVVQEAIESQAADKEDNRIIEIFGKL 603

Query: 519 ------------------ALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAE 560
                              L +++ M     +P+ VT+S ++     C   ++A  +  E
Sbjct: 604 AAEKACEAKNSGKQEILCILGVFQKMHELKIKPNVVTFSAILNACSRCDSFEDASMLLEE 663

Query: 561 MRRKNWVPDEPVYGL 575
           +R    + D  VYG+
Sbjct: 664 LR----LFDNQVYGV 674



 Score = 47.0 bits (110), Expect = 0.049,   Method: Compositional matrix adjust.
 Identities = 64/269 (23%), Positives = 110/269 (40%), Gaps = 29/269 (10%)

Query: 533 PDKVTYSIVMEVLGHCGYLDEAEAV----FAEMRRKNWVPDEPVYGLLVDLWGKAGNVRK 588
           PD   Y+ ++  LG+ G  D A+AV    FA  R         +   ++   G+ G V  
Sbjct: 153 PDD--YTFLLRELGNRG--DSAKAVRCFEFAVRRESGKNEQGKLASAMISTLGRLGKVEL 208

Query: 589 AWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
           A   ++  L+ G    V   ++L+SA+ R G  ++A  +   M + GL P+L TY  ++ 
Sbjct: 209 AKAVFDTALKEGYGKTVYAFSALISAYGRSGYCNEAIKVFDSMKSNGLMPNLVTYNAVID 268

Query: 649 CCTEARSPYD--MGFCHELMAVSGHPAHMF---LLSMPSPGPDGQNVRDHVGSFLEMMHS 703
            C +    +   +     +++    P  +    LL++ S G   +  R    + ++    
Sbjct: 269 ACGKGGVEFKKVVEIFDGMLSNGVQPDRITFNSLLAVCSRGGLWEAARRLFSAMVDKGID 328

Query: 704 EDRESKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAVKEKGMSYWLINLHVMSD 763
           +D  +   L+DAV     K G  + A  +      KN+ P+ V              M D
Sbjct: 329 QDIFTYNTLLDAVC----KGGQMDLAFEIMSEMPTKNILPNVV----------TYSTMID 374

Query: 764 GTAVIA-LSRTLAWFRKQMLISGVGPSRI 791
           G A +  L   L  F  +M   GVG  R+
Sbjct: 375 GYAKVGRLDDALNMF-NEMKFLGVGLDRV 402


>gi|356530296|ref|XP_003533718.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g18940-like [Glycine max]
          Length = 830

 Score =  181 bits (459), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 94/302 (31%), Positives = 160/302 (52%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           R  G + DE T +T++   GR        K L ++  +G +P  V YN ++  +G+A   
Sbjct: 279 RSKGLEFDEFTCSTVISACGREGMLDEARKFLAELKLNGYKPGTVMYNSMLQVFGKAGIY 338

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
            EAL + K+M+   C PD +TY  L   + +AGFLD  M +   M + G+ P+  TY+ +
Sbjct: 339 TEALSILKEMEDNNCPPDSITYNELAATYVRAGFLDEGMAVIDTMTSKGVMPNAITYTTV 398

Query: 472 INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF 531
           I+  GKAG    A +LF +M + GC PN+ TYN ++A+  K    +  +K+  +M+  G 
Sbjct: 399 IDAYGKAGREDDALRLFSKMKDLGCAPNVYTYNSVLAMLGKKSRTEDVIKVLCEMKLNGC 458

Query: 532 EPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWE 591
            P++ T++ ++ V    G  +    V  EM+   + PD+  +  L+  + + G+   + +
Sbjct: 459 APNRATWNTMLAVCSEEGKHNYVNKVLREMKNCGFEPDKDTFNTLISSYARCGSEVDSAK 518

Query: 592 WYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCT 651
            Y  M+++G  P V T N+LL+A    G    A  ++Q M   G KP+  +Y+LLL C +
Sbjct: 519 MYGEMVKSGFTPCVTTYNALLNALAHRGDWKAAESVIQDMQTKGFKPNETSYSLLLHCYS 578

Query: 652 EA 653
           +A
Sbjct: 579 KA 580



 Score =  168 bits (425), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 103/363 (28%), Positives = 168/363 (46%), Gaps = 70/363 (19%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           G+K     Y +M+ + G+A  +     +L +M  + C P+ +TYN L  +Y RA +L+E 
Sbjct: 317 GYKPGTVMYNSMLQVFGKAGIYTEALSILKEMEDNNCPPDSITYNELAATYVRAGFLDEG 376

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
           + V   M   G  P+ +TY T+ID + KAG  D A+ ++ KM+  G +P+ +TY+ ++  
Sbjct: 377 MAVIDTMTSKGVMPNAITYTTVIDAYGKAGREDDALRLFSKMKDLGCAPNVYTYNSVLAM 436

Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPD 534
           LGK    +   ++ CEM   GC PN  T+N M+A+ ++   +    K+ R+M+N GFEPD
Sbjct: 437 LGKKSRTEDVIKVLCEMKLNGCAPNRATWNTMLAVCSEEGKHNYVNKVLREMKNCGFEPD 496

Query: 535 K-----------------------------------VTYSIVMEVLGHCGYLDEAEAVFA 559
           K                                    TY+ ++  L H G    AE+V  
Sbjct: 497 KDTFNTLISSYARCGSEVDSAKMYGEMVKSGFTPCVTTYNALLNALAHRGDWKAAESVIQ 556

Query: 560 EMRRKNWVPDEPVYGLLVDLWGKAGNVR---------------KAW-------------- 590
           +M+ K + P+E  Y LL+  + KAGNVR                +W              
Sbjct: 557 DMQTKGFKPNETSYSLLLHCYSKAGNVRGIEKVEKEIYDGQVFPSWILLRTLVLSNHKCR 616

Query: 591 ------EWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYT 644
                   ++ + + G +P++   NS+LS F R    S A  +L  +   GL+P+L TY 
Sbjct: 617 HLRGMERAFDQLQKYGYKPDLVVINSMLSMFSRNKMFSKAREMLHFIHECGLQPNLFTYN 676

Query: 645 LLL 647
            L+
Sbjct: 677 CLM 679



 Score =  160 bits (404), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 96/315 (30%), Positives = 153/315 (48%), Gaps = 5/315 (1%)

Query: 343 ALGFFNWLRRQAG----FKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTY 398
           AL  F W     G     + D      MV ILGR  Q    +KL D +  +    +V  Y
Sbjct: 160 ALLLFEWGWLHFGSDQNLRLDNQVVELMVRILGRESQHSIASKLFDLIPVEKYSLDVRAY 219

Query: 399 NRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAG-FLDVAMDMYKKMQ 457
             ++H+Y R+     A+D+F +M+ +G +P  VTY  ++D++ K G      +++  +M+
Sbjct: 220 TTILHAYARSGKYKRAIDLFDKMEGIGLDPTLVTYNVMLDVYGKMGRSWGRILELLDEMR 279

Query: 458 AAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQ 517
           + GL  D FT S +I+  G+ G L  A +   E+   G  P  V YN M+ +  KA  Y 
Sbjct: 280 SKGLEFDEFTCSTVISACGREGMLDEARKFLAELKLNGYKPGTVMYNSMLQVFGKAGIYT 339

Query: 518 SALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLV 577
            AL + ++M++    PD +TY+ +       G+LDE  AV   M  K  +P+   Y  ++
Sbjct: 340 EALSILKEMEDNNCPPDSITYNELAATYVRAGFLDEGMAVIDTMTSKGVMPNAITYTTVI 399

Query: 578 DLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLK 637
           D +GKAG    A   +  M   G  PNV T NS+L+   +  +  D   +L  M   G  
Sbjct: 400 DAYGKAGREDDALRLFSKMKDLGCAPNVYTYNSVLAMLGKKSRTEDVIKVLCEMKLNGCA 459

Query: 638 PSLQTYTLLLSCCTE 652
           P+  T+  +L+ C+E
Sbjct: 460 PNRATWNTMLAVCSE 474



 Score =  129 bits (324), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 87/340 (25%), Positives = 153/340 (45%), Gaps = 2/340 (0%)

Query: 332 QVLKQLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGC 391
           ++L +   H++A   F+ +  +  +  D   YTT++    R+ ++     L D+M   G 
Sbjct: 189 RILGRESQHSIASKLFDLIPVEK-YSLDVRAYTTILHAYARSGKYKRAIDLFDKMEGIGL 247

Query: 392 QPNVVTYNRLIHSYGR-ANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAM 450
            P +VTYN ++  YG+        L++  +M+  G E D  T  T+I    + G LD A 
Sbjct: 248 DPTLVTYNVMLDVYGKMGRSWGRILELLDEMRSKGLEFDEFTCSTVISACGREGMLDEAR 307

Query: 451 DMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQ 510
               +++  G  P T  Y+ ++   GKAG    A  +  EM +  C P+ +TYN + A  
Sbjct: 308 KFLAELKLNGYKPGTVMYNSMLQVFGKAGIYTEALSILKEMEDNNCPPDSITYNELAATY 367

Query: 511 AKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDE 570
            +A      + +   M + G  P+ +TY+ V++  G  G  D+A  +F++M+     P+ 
Sbjct: 368 VRAGFLDEGMAVIDTMTSKGVMPNAITYTTVIDAYGKAGREDDALRLFSKMKDLGCAPNV 427

Query: 571 PVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQG 630
             Y  ++ + GK        +    M   G  PN  T N++L+     G+ +    +L+ 
Sbjct: 428 YTYNSVLAMLGKKSRTEDVIKVLCEMKLNGCAPNRATWNTMLAVCSEEGKHNYVNKVLRE 487

Query: 631 MLNLGLKPSLQTYTLLLSCCTEARSPYDMGFCHELMAVSG 670
           M N G +P   T+  L+S      S  D    +  M  SG
Sbjct: 488 MKNCGFEPDKDTFNTLISSYARCGSEVDSAKMYGEMVKSG 527



 Score =  126 bits (316), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 95/391 (24%), Positives = 186/391 (47%), Gaps = 9/391 (2%)

Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLI 402
           AL  F+ ++   G   + +TY +++ +LG+  +   + K+L +M  +GC PN  T+N ++
Sbjct: 411 ALRLFSKMK-DLGCAPNVYTYNSVLAMLGKKSRTEDVIKVLCEMKLNGCAPNRATWNTML 469

Query: 403 ---HSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAA 459
                 G+ NY+N+   V ++M+  G EPD+ T+ TLI  +A+ G    +  MY +M  +
Sbjct: 470 AVCSEEGKHNYVNK---VLREMKNCGFEPDKDTFNTLISSYARCGSEVDSAKMYGEMVKS 526

Query: 460 GLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSA 519
           G +P   TY+ ++N L   G  +AA  +  +M  +G  PN  +Y++++   +KA N +  
Sbjct: 527 GFTPCVTTYNALLNALAHRGDWKAAESVIQDMQTKGFKPNETSYSLLLHCYSKAGNVRGI 586

Query: 520 LKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDL 579
            K+ +++ +    P  +    ++     C +L   E  F ++++  + PD  V   ++ +
Sbjct: 587 EKVEKEIYDGQVFPSWILLRTLVLSNHKCRHLRGMERAFDQLQKYGYKPDLVVINSMLSM 646

Query: 580 WGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPS 639
           + +     KA E    + + GL+PN+ T N L+  ++R  +   A  +L+G+ N   +P 
Sbjct: 647 FSRNKMFSKAREMLHFIHECGLQPNLFTYNCLMDLYVREDECWKAEEVLKGIQNSVPEPD 706

Query: 640 LQTY-TLLLSCCTEARSPYDMGFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFL 698
           + +Y T++   C +      +    E+      P  +   +  S G  G  + D     +
Sbjct: 707 VVSYNTVIKGFCRKGLMQEAIRVLSEMTTKGIQPTIVTYNTFLS-GYAGMELFDEANEVI 765

Query: 699 EMMHSEDRESKRGLVDAVVDFLHKSGLKEEA 729
             M   +          +VD   K+G  EEA
Sbjct: 766 RFMIEHNCRPSELTYKILVDGYCKAGKHEEA 796



 Score = 90.5 bits (223), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 58/238 (24%), Positives = 108/238 (45%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           GFK +E +Y+ ++    +A     I K+  ++      P+ +    L+ S  +  +L   
Sbjct: 562 GFKPNETSYSLLLHCYSKAGNVRGIEKVEKEIYDGQVFPSWILLRTLVLSNHKCRHLRGM 621

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
              F Q+Q  G +PD V   +++ + ++      A +M   +   GL P+ FTY+ +++ 
Sbjct: 622 ERAFDQLQKYGYKPDLVVINSMLSMFSRNKMFSKAREMLHFIHECGLQPNLFTYNCLMDL 681

Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPD 534
             +      A ++   + N    P++V+YN +I    +    Q A+++  +M   G +P 
Sbjct: 682 YVREDECWKAEEVLKGIQNSVPEPDVVSYNTVIKGFCRKGLMQEAIRVLSEMTTKGIQPT 741

Query: 535 KVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEW 592
            VTY+  +         DEA  V   M   N  P E  Y +LVD + KAG   +A ++
Sbjct: 742 IVTYNTFLSGYAGMELFDEANEVIRFMIEHNCRPSELTYKILVDGYCKAGKHEEAMDF 799



 Score = 90.1 bits (222), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 73/336 (21%), Positives = 136/336 (40%), Gaps = 35/336 (10%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           +  GF+ D+ T+ T++    R        K+  +MV+ G  P V TYN L+++       
Sbjct: 489 KNCGFEPDKDTFNTLISSYARCGSEVDSAKMYGEMVKSGFTPCVTTYNALLNALAHRGDW 548

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFL----DVAMDMYK------------- 454
             A  V + MQ  G +P+  +Y  L+  ++KAG +     V  ++Y              
Sbjct: 549 KAAESVIQDMQTKGFKPNETSYSLLLHCYSKAGNVRGIEKVEKEIYDGQVFPSWILLRTL 608

Query: 455 ------------------KMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGC 496
                             ++Q  G  PD    + +++   +      A ++   +   G 
Sbjct: 609 VLSNHKCRHLRGMERAFDQLQKYGYKPDLVVINSMLSMFSRNKMFSKAREMLHFIHECGL 668

Query: 497 IPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEA 556
            PNL TYN ++ L  +      A ++ + +QN+  EPD V+Y+ V++     G + EA  
Sbjct: 669 QPNLFTYNCLMDLYVREDECWKAEEVLKGIQNSVPEPDVVSYNTVIKGFCRKGLMQEAIR 728

Query: 557 VFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFL 616
           V +EM  K   P    Y   +  +       +A E    M++   RP+  T   L+  + 
Sbjct: 729 VLSEMTTKGIQPTIVTYNTFLSGYAGMELFDEANEVIRFMIEHNCRPSELTYKILVDGYC 788

Query: 617 RVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTE 652
           + G+  +A   +  +  + +    ++   L SC  E
Sbjct: 789 KAGKHEEAMDFVTKIKEIDISFDDKSVKRLGSCIRE 824



 Score = 43.9 bits (102), Expect = 0.43,   Method: Compositional matrix adjust.
 Identities = 51/245 (20%), Positives = 95/245 (38%), Gaps = 18/245 (7%)

Query: 564 KNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSD 623
           +N   D  V  L+V + G+      A + ++ +       +V    ++L A+ R G+   
Sbjct: 175 QNLRLDNQVVELMVRILGRESQHSIASKLFDLIPVEKYSLDVRAYTTILHAYARSGKYKR 234

Query: 624 AYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGFCHEL---MAVSGHPAHMFLLSM 680
           A  L   M  +GL P+L TY ++L    +    +  G   EL   M   G     F  S 
Sbjct: 235 AIDLFDKMEGIGLDPTLVTYNVMLDVYGKMGRSW--GRILELLDEMRSKGLEFDEFTCST 292

Query: 681 PSPGPDGQNVRDHVGSFLEMMHSEDRESKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKN 740
                  + + D    FL  +     +    + ++++    K+G+  EA S+ +     N
Sbjct: 293 VISACGREGMLDEARKFLAELKLNGYKPGTVMYNSMLQVFGKAGIYTEALSILKEMEDNN 352

Query: 741 VYPDAVKEKGMSYWLINLHVMSDGTAVIALSRTLAWFRKQMLISGVGPSRI---DIVTGW 797
             PD++    ++   +    + +G AVI            M   GV P+ I    ++  +
Sbjct: 353 CPPDSITYNELAATYVRAGFLDEGMAVI----------DTMTSKGVMPNAITYTTVIDAY 402

Query: 798 GRRSR 802
           G+  R
Sbjct: 403 GKAGR 407


>gi|357165906|ref|XP_003580534.1| PREDICTED: pentatricopeptide repeat-containing protein At1g79490,
           mitochondrial-like [Brachypodium distachyon]
          Length = 775

 Score =  181 bits (459), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 131/475 (27%), Positives = 227/475 (47%), Gaps = 13/475 (2%)

Query: 331 NQVLKQLQDHTVALGFFNWLRRQA--GFKHDEHTYTTMVGILGRARQFGAINKLLDQM-V 387
           N +L  L    +A   F  L   +  G   D+ TY   V  L RA +  A  KL D+M  
Sbjct: 221 NALLSVLLTRGLAFKAFEVLDEMSVSGCALDKGTYELAVPALARAGRIDASRKLFDEMRQ 280

Query: 388 RDG---CQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAG 444
           RDG     P V  Y+ ++    ++  L+ A+ ++++M  VG          +++   +AG
Sbjct: 281 RDGVGRASPGV--YSVMVDVLAKSGRLDAAMGMYREMVAVGHRVSTSVSTAMVEGLVRAG 338

Query: 445 FLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYN 504
            LD  M+++++M+  GL P    Y++++    ++G L  A +LF +M   G  P   TY 
Sbjct: 339 KLDAGMELWEEMRRGGLRPSFGLYTMVVEANARSGRLDVAAKLFGDMEKSGFFPTPATYA 398

Query: 505 IMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRK 564
            ++ + A A     A+++Y  M NAG  P   T++ ++ +L +   LD A  V  EM+  
Sbjct: 399 CLVEMHASAGQVDIAMRMYHSMANAGTRPGLSTFTALLTMLANKRLLDLAAKVLLEMKAS 458

Query: 565 NWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDA 624
            + P E     L+ ++ K G+   A  W   M  AG+R N      L  + +++G    A
Sbjct: 459 GF-PIEVTASDLLMIYIKDGSTELALRWLRFMGSAGIRTNNFIIRQLFESCMKMGLYDSA 517

Query: 625 YHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGFCHELMAVSGHPAHMFLLSMPSPG 684
             LL+  +    K  +  YT +L+     +         ++++VS H AH F+  + + G
Sbjct: 518 RPLLETYVGAAAKVDMILYTSILAHLVRCQDEGSEWAIMDILSVSRHKAHDFMCGLFT-G 576

Query: 685 PDGQN--VRDHVGSFLEMMHSEDRES-KRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNV 741
           P+ +   V   V  F + +  ++ ES  R  V+ ++++L   G    A  VW+VA +  +
Sbjct: 577 PEQRKKPVLSFVREFFQGIDYDNEESAARYFVNVLLNYLVLMGQMNRARCVWKVAYENKL 636

Query: 742 YPDAVKEKGMSYWLINLHVMSDGTAVIALSRTLAWFRKQMLISGVGPSRIDIVTG 796
           +P A+       W +++  +S G A+++   TL  FRK+ML  GV P RI +VTG
Sbjct: 637 FPKAIVFDQHIAWSLDIRNLSVGAALVSTVHTLHRFRKRMLYYGVVPRRIKLVTG 691



 Score =  100 bits (248), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 79/325 (24%), Positives = 140/325 (43%), Gaps = 14/325 (4%)

Query: 339 DHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTY 398
           D T  L    W R Q  F   +   + +   L  A     +  L D  +     P+  T+
Sbjct: 124 DPTPLLSLVAWSRHQPWFVPSDDLSSLVAARLQPATHSSDLLSLFDDAL---AHPDPATF 180

Query: 399 ----NRLIHSYGRANYLNEALDVFKQMQVVGCEP-DRVTYCTLIDIHAKAGFLDVAMDMY 453
               N ++ +      L  A   FK+++  G    +  TY  L+ +    G    A ++ 
Sbjct: 181 PKTLNAVVSALATHGLLEPAFYCFKRLRDAGFRGLETPTYNALLSVLLTRGLAFKAFEVL 240

Query: 454 KKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCI----PNLVTYNIMIAL 509
            +M  +G + D  TY + +  L +AG + A+ +LF EM  +  +    P +  Y++M+ +
Sbjct: 241 DEMSVSGCALDKGTYELAVPALARAGRIDASRKLFDEMRQRDGVGRASPGV--YSVMVDV 298

Query: 510 QAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPD 569
            AK+    +A+ +YR+M   G        + ++E L   G LD    ++ EMRR    P 
Sbjct: 299 LAKSGRLDAAMGMYREMVAVGHRVSTSVSTAMVEGLVRAGKLDAGMELWEEMRRGGLRPS 358

Query: 570 EPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQ 629
             +Y ++V+   ++G +  A + +  M ++G  P   T   L+      GQ+  A  +  
Sbjct: 359 FGLYTMVVEANARSGRLDVAAKLFGDMEKSGFFPTPATYACLVEMHASAGQVDIAMRMYH 418

Query: 630 GMLNLGLKPSLQTYTLLLSCCTEAR 654
            M N G +P L T+T LL+     R
Sbjct: 419 SMANAGTRPGLSTFTALLTMLANKR 443


>gi|224103707|ref|XP_002313163.1| predicted protein [Populus trichocarpa]
 gi|222849571|gb|EEE87118.1| predicted protein [Populus trichocarpa]
          Length = 643

 Score =  181 bits (458), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 94/303 (31%), Positives = 164/303 (54%), Gaps = 1/303 (0%)

Query: 345 GFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHS 404
           G F  ++  AG   DE+TY T++    R   +     + + M   G  P+ VTYN L+  
Sbjct: 90  GLFEGMK-NAGILPDEYTYNTLITCCRRGSLYEEAAAVFEDMKSMGFVPDKVTYNTLLDV 148

Query: 405 YGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPD 464
           YG++  + EA++V ++M+V GC P  VTY +LI  +A+ G L+ AM++  +M   G+  D
Sbjct: 149 YGKSRRIKEAIEVLREMEVNGCSPSIVTYNSLISAYARDGLLEEAMELKNQMVERGIKLD 208

Query: 465 TFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYR 524
            FTY+ +++   + G  ++A ++F EM   GC PN+ T+N +I +      +   +K++ 
Sbjct: 209 VFTYTAMLSGFVRTGKDESAMRVFEEMRTAGCKPNICTFNALIKMHGNRGKFAEMMKVFE 268

Query: 525 DMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAG 584
           +++     PD VT++ ++ V G  G   E   VF EM+R  +VP+   Y  L+  + + G
Sbjct: 269 EIKICCCVPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRVGFVPERDTYNTLISAYSRCG 328

Query: 585 NVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYT 644
           +  +A   Y+ ML  G+ P++ T N++L+A  R G    +  +L  M +   KP+  T+ 
Sbjct: 329 SFDQAMAMYKRMLDTGITPDLSTYNAVLAALARGGLWEQSEKILAEMQDGMCKPNELTHC 388

Query: 645 LLL 647
            LL
Sbjct: 389 SLL 391



 Score =  153 bits (387), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 88/304 (28%), Positives = 158/304 (51%), Gaps = 1/304 (0%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           R AG K +  T+  ++ + G   +F  + K+ +++    C P++VT+N L+  +G+    
Sbjct: 236 RTAGCKPNICTFNALIKMHGNRGKFAEMMKVFEEIKICCCVPDIVTWNTLLAVFGQNGMD 295

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
           +E   VFK+M+ VG  P+R TY TLI  +++ G  D AM MYK+M   G++PD  TY+ +
Sbjct: 296 SEVSGVFKEMKRVGFVPERDTYNTLISAYSRCGSFDQAMAMYKRMLDTGITPDLSTYNAV 355

Query: 472 INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF 531
           +  L + G  + + ++  EM +  C PN +T+  ++   A  +     L L  ++ +   
Sbjct: 356 LAALARGGLWEQSEKILAEMQDGMCKPNELTHCSLLHAYANGKEIGRMLALAEEICSGVI 415

Query: 532 EPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWE 591
           EP  V    ++ V   C  L EAE  F E++RK + PD      ++ ++G+   V K  E
Sbjct: 416 EPHAVLLKTLVLVNSKCDLLLEAERAFLELKRKGFSPDLSTLNAMIAIYGRRQMVTKTNE 475

Query: 592 WYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTY-TLLLSCC 650
               M ++G  P++ T NSL+    +      +  +L+ +L  G+KP + +Y T++ + C
Sbjct: 476 ILNFMKESGFTPSLATYNSLMYMHSQSENFERSEEVLKEILAKGIKPDIISYNTVIFAYC 535

Query: 651 TEAR 654
              R
Sbjct: 536 RNGR 539



 Score =  149 bits (377), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 94/347 (27%), Positives = 176/347 (50%), Gaps = 43/347 (12%)

Query: 341 TVALGFFNWLRRQAGFKHDEHTYTTMVGIL---GRARQFGAINKLLDQMVRDGCQPNVVT 397
           +VA    N L +  GF+ D + YT+++      GR R+   + K   +M  +GC+P ++T
Sbjct: 15  SVAASLLNNLHKD-GFEPDVYAYTSLITACVSNGRYREAVMVFK---KMEEEGCKPTLIT 70

Query: 398 YNRLIHSYG------------------------------------RANYLNEALDVFKQM 421
           YN +++ YG                                    R +   EA  VF+ M
Sbjct: 71  YNVILNVYGKMGMPWNKITGLFEGMKNAGILPDEYTYNTLITCCRRGSLYEEAAAVFEDM 130

Query: 422 QVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHL 481
           + +G  PD+VTY TL+D++ K+  +  A+++ ++M+  G SP   TY+ +I+   + G L
Sbjct: 131 KSMGFVPDKVTYNTLLDVYGKSRRIKEAIEVLREMEVNGCSPSIVTYNSLISAYARDGLL 190

Query: 482 QAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIV 541
           + A +L  +MV +G   ++ TY  M++   +    +SA++++ +M+ AG +P+  T++ +
Sbjct: 191 EEAMELKNQMVERGIKLDVFTYTAMLSGFVRTGKDESAMRVFEEMRTAGCKPNICTFNAL 250

Query: 542 MEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGL 601
           +++ G+ G   E   VF E++    VPD   +  L+ ++G+ G   +    ++ M + G 
Sbjct: 251 IKMHGNRGKFAEMMKVFEEIKICCCVPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRVGF 310

Query: 602 RPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
            P   T N+L+SA+ R G    A  + + ML+ G+ P L TY  +L+
Sbjct: 311 VPERDTYNTLISAYSRCGSFDQAMAMYKRMLDTGITPDLSTYNAVLA 357



 Score =  139 bits (350), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 85/306 (27%), Positives = 157/306 (51%), Gaps = 11/306 (3%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           +  GF  D+ TY T++ + G++R+     ++L +M  +GC P++VTYN LI +Y R   L
Sbjct: 131 KSMGFVPDKVTYNTLLDVYGKSRRIKEAIEVLREMEVNGCSPSIVTYNSLISAYARDGLL 190

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
            EA+++  QM   G + D  TY  ++    + G  + AM ++++M+ AG  P+  T++ +
Sbjct: 191 EEAMELKNQMVERGIKLDVFTYTAMLSGFVRTGKDESAMRVFEEMRTAGCKPNICTFNAL 250

Query: 472 INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF 531
           I   G  G      ++F E+    C+P++VT+N ++A+  +         ++++M+  GF
Sbjct: 251 IKMHGNRGKFAEMMKVFEEIKICCCVPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRVGF 310

Query: 532 EPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWE 591
            P++ TY+ ++     CG  D+A A++  M      PD   Y  ++    + G     WE
Sbjct: 311 VPERDTYNTLISAYSRCGSFDQAMAMYKRMLDTGITPDLSTYNAVLAALARGG----LWE 366

Query: 592 WYEAML---QAGL-RPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPS---LQTYT 644
             E +L   Q G+ +PN  T  SLL A+    ++     L + + +  ++P    L+T  
Sbjct: 367 QSEKILAEMQDGMCKPNELTHCSLLHAYANGKEIGRMLALAEEICSGVIEPHAVLLKTLV 426

Query: 645 LLLSCC 650
           L+ S C
Sbjct: 427 LVNSKC 432



 Score =  135 bits (339), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 75/285 (26%), Positives = 147/285 (51%), Gaps = 1/285 (0%)

Query: 365 TMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVV 424
            ++ +LG+  +      LL+ + +DG +P+V  Y  LI +        EA+ VFK+M+  
Sbjct: 3   VIINMLGKEGKVSVAASLLNNLHKDGFEPDVYAYTSLITACVSNGRYREAVMVFKKMEEE 62

Query: 425 GCEPDRVTYCTLIDIHAKAGF-LDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQA 483
           GC+P  +TY  +++++ K G   +    +++ M+ AG+ PD +TY+ +I C  +    + 
Sbjct: 63  GCKPTLITYNVILNVYGKMGMPWNKITGLFEGMKNAGILPDEYTYNTLITCCRRGSLYEE 122

Query: 484 AHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVME 543
           A  +F +M + G +P+ VTYN ++ +  K+R  + A+++ R+M+  G  P  VTY+ ++ 
Sbjct: 123 AAAVFEDMKSMGFVPDKVTYNTLLDVYGKSRRIKEAIEVLREMEVNGCSPSIVTYNSLIS 182

Query: 544 VLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRP 603
                G L+EA  +  +M  +    D   Y  ++  + + G    A   +E M  AG +P
Sbjct: 183 AYARDGLLEEAMELKNQMVERGIKLDVFTYTAMLSGFVRTGKDESAMRVFEEMRTAGCKP 242

Query: 604 NVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
           N+ T N+L+      G+ ++   + + +      P + T+  LL+
Sbjct: 243 NICTFNALIKMHGNRGKFAEMMKVFEEIKICCCVPDIVTWNTLLA 287



 Score =  116 bits (290), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 67/280 (23%), Positives = 135/280 (48%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           G   D  TY  ++  L R   +    K+L +M    C+PN +T+  L+H+Y     +   
Sbjct: 344 GITPDLSTYNAVLAALARGGLWEQSEKILAEMQDGMCKPNELTHCSLLHAYANGKEIGRM 403

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
           L + +++     EP  V   TL+ +++K   L  A   + +++  G SPD  T + +I  
Sbjct: 404 LALAEEICSGVIEPHAVLLKTLVLVNSKCDLLLEAERAFLELKRKGFSPDLSTLNAMIAI 463

Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPD 534
            G+   +   +++   M   G  P+L TYN ++ + +++ N++ + ++ +++   G +PD
Sbjct: 464 YGRRQMVTKTNEILNFMKESGFTPSLATYNSLMYMHSQSENFERSEEVLKEILAKGIKPD 523

Query: 535 KVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYE 594
            ++Y+ V+      G + EA  +F+EMR    +PD   Y   V  +       +A +   
Sbjct: 524 IISYNTVIFAYCRNGRMKEASHIFSEMRESGLIPDVITYNTFVASYAADSMFEEAIDVVC 583

Query: 595 AMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNL 634
            M++ G +PN  T NS++  + ++ +  DA   +  +  L
Sbjct: 584 YMIKHGCKPNQNTYNSVIDGYCKLNRRDDAIKFISSLHEL 623



 Score =  115 bits (288), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 69/299 (23%), Positives = 141/299 (47%), Gaps = 1/299 (0%)

Query: 345 GFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHS 404
           G F  ++R  GF  +  TY T++    R   F     +  +M+  G  P++ TYN ++ +
Sbjct: 300 GVFKEMKR-VGFVPERDTYNTLISAYSRCGSFDQAMAMYKRMLDTGITPDLSTYNAVLAA 358

Query: 405 YGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPD 464
             R     ++  +  +MQ   C+P+ +T+C+L+  +A    +   + + +++ +  + P 
Sbjct: 359 LARGGLWEQSEKILAEMQDGMCKPNELTHCSLLHAYANGKEIGRMLALAEEICSGVIEPH 418

Query: 465 TFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYR 524
                 ++    K   L  A + F E+  +G  P+L T N MIA+  + +      ++  
Sbjct: 419 AVLLKTLVLVNSKCDLLLEAERAFLELKRKGFSPDLSTLNAMIAIYGRRQMVTKTNEILN 478

Query: 525 DMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAG 584
            M+ +GF P   TY+ +M +       + +E V  E+  K   PD   Y  ++  + + G
Sbjct: 479 FMKESGFTPSLATYNSLMYMHSQSENFERSEEVLKEILAKGIKPDIISYNTVIFAYCRNG 538

Query: 585 NVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTY 643
            +++A   +  M ++GL P+V T N+ ++++       +A  ++  M+  G KP+  TY
Sbjct: 539 RMKEASHIFSEMRESGLIPDVITYNTFVASYAADSMFEEAIDVVCYMIKHGCKPNQNTY 597



 Score =  107 bits (267), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 67/216 (31%), Positives = 104/216 (48%), Gaps = 36/216 (16%)

Query: 469 SVIINCLGKAGHLQAAHQL-----------------------------------FCEMVN 493
           +VIIN LGK G +  A  L                                   F +M  
Sbjct: 2   AVIINMLGKEGKVSVAASLLNNLHKDGFEPDVYAYTSLITACVSNGRYREAVMVFKKMEE 61

Query: 494 QGCIPNLVTYNIMIALQAK-ARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLD 552
           +GC P L+TYN+++ +  K    +     L+  M+NAG  PD+ TY+ ++         +
Sbjct: 62  EGCKPTLITYNVILNVYGKMGMPWNKITGLFEGMKNAGILPDEYTYNTLITCCRRGSLYE 121

Query: 553 EAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLL 612
           EA AVF +M+   +VPD+  Y  L+D++GK+  +++A E    M   G  P++ T NSL+
Sbjct: 122 EAAAVFEDMKSMGFVPDKVTYNTLLDVYGKSRRIKEAIEVLREMEVNGCSPSIVTYNSLI 181

Query: 613 SAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
           SA+ R G L +A  L   M+  G+K  + TYT +LS
Sbjct: 182 SAYARDGLLEEAMELKNQMVERGIKLDVFTYTAMLS 217



 Score =  106 bits (264), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 64/293 (21%), Positives = 139/293 (47%), Gaps = 6/293 (2%)

Query: 359 DEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVF 418
           D  T+ T++ + G+      ++ +  +M R G  P   TYN LI +Y R    ++A+ ++
Sbjct: 278 DIVTWNTLLAVFGQNGMDSEVSGVFKEMKRVGFVPERDTYNTLISAYSRCGSFDQAMAMY 337

Query: 419 KQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLG-- 476
           K+M   G  PD  TY  ++   A+ G  + +  +  +MQ     P+  T+  +++     
Sbjct: 338 KRMLDTGITPDLSTYNAVLAALARGGLWEQSEKILAEMQDGMCKPNELTHCSLLHAYANG 397

Query: 477 -KAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDK 535
            + G + A  +  C  V +   P+ V    ++ + +K      A + + +++  GF PD 
Sbjct: 398 KEIGRMLALAEEICSGVIE---PHAVLLKTLVLVNSKCDLLLEAERAFLELKRKGFSPDL 454

Query: 536 VTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEA 595
            T + ++ + G    + +   +   M+   + P    Y  L+ +  ++ N  ++ E  + 
Sbjct: 455 STLNAMIAIYGRRQMVTKTNEILNFMKESGFTPSLATYNSLMYMHSQSENFERSEEVLKE 514

Query: 596 MLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
           +L  G++P++ + N+++ A+ R G++ +A H+   M   GL P + TY   ++
Sbjct: 515 ILAKGIKPDIISYNTVIFAYCRNGRMKEASHIFSEMRESGLIPDVITYNTFVA 567



 Score = 94.0 bits (232), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 51/176 (28%), Positives = 88/176 (50%), Gaps = 1/176 (0%)

Query: 347 FNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYG 406
           F  L+R+ GF  D  T   M+ I GR +     N++L+ M   G  P++ TYN L++ + 
Sbjct: 442 FLELKRK-GFSPDLSTLNAMIAIYGRRQMVTKTNEILNFMKESGFTPSLATYNSLMYMHS 500

Query: 407 RANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTF 466
           ++     + +V K++   G +PD ++Y T+I  + + G +  A  ++ +M+ +GL PD  
Sbjct: 501 QSENFERSEEVLKEILAKGIKPDIISYNTVIFAYCRNGRMKEASHIFSEMRESGLIPDVI 560

Query: 467 TYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKL 522
           TY+  +         + A  + C M+  GC PN  TYN +I    K      A+K 
Sbjct: 561 TYNTFVASYAADSMFEEAIDVVCYMIKHGCKPNQNTYNSVIDGYCKLNRRDDAIKF 616



 Score = 41.6 bits (96), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 23/87 (26%), Positives = 39/87 (44%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           R++G   D  TY T V        F     ++  M++ GC+PN  TYN +I  Y + N  
Sbjct: 551 RESGLIPDVITYNTFVASYAADSMFEEAIDVVCYMIKHGCKPNQNTYNSVIDGYCKLNRR 610

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLID 438
           ++A+     +  +     R   C L++
Sbjct: 611 DDAIKFISSLHELDPHISREDECRLLE 637


>gi|242077154|ref|XP_002448513.1| hypothetical protein SORBIDRAFT_06g028250 [Sorghum bicolor]
 gi|241939696|gb|EES12841.1| hypothetical protein SORBIDRAFT_06g028250 [Sorghum bicolor]
          Length = 718

 Score =  181 bits (458), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 125/448 (27%), Positives = 216/448 (48%), Gaps = 7/448 (1%)

Query: 354 AGFKHDEHTYTTMVGILGRARQFGAINKLLDQMV-RDGC-QPNVVTYNRLIHSYGRANYL 411
           +G   DE TY   V  L RA +  A  K+ D+M  R+G  +  V  Y+ ++    +A  L
Sbjct: 189 SGCALDESTYELAVPALARAGRIDAARKMFDEMKQREGIGRAPVGVYSVMVDVLAKAGRL 248

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
           + A+ ++++M  VG          +++   ++G LD  M+++++M+  GL P    Y+++
Sbjct: 249 DAAMGMYREMVAVGHRVSTAVSTAMVEALVRSGKLDAGMELWEEMRRGGLRPSFGLYTMV 308

Query: 472 INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF 531
           +    ++G L  A +LF +M   G  P   TY  ++ + A A    +A++LY  M NAG 
Sbjct: 309 VEANARSGRLDMAAKLFGDMEKSGFFPTPATYACLVEMHASAGQVDAAMRLYHSMANAGT 368

Query: 532 EPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWE 591
            P   T++ ++ +L +   LD A  V  EM+   + P E     L+ ++ K G+   A  
Sbjct: 369 RPGLSTFTALLTMLANKRLLDLAAKVLLEMKASGF-PIEVTASDLLMIYIKDGSTDLALR 427

Query: 592 WYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCT 651
           W   M  AG+R N      L  + ++ G    A  LL+  +    K  L  YT +L+   
Sbjct: 428 WLRFMGSAGIRTNNFIIRQLFESCMKTGLYDSARPLLEAYVAGAAKVDLILYTSILAHLV 487

Query: 652 EARSPYDMGFCHELMAVSGHPAHMFLLSMPSPGPD--GQNVRDHVGSFLEMMHSEDRES- 708
             +         +++  S H AH F+  + + GP+   Q V   V  F + +  ++ ES 
Sbjct: 488 RCQDESSERAIMDILCASKHKAHDFMCGLFT-GPEQRKQPVLSFVREFFQGIDYDNEESA 546

Query: 709 KRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAVKEKGMSYWLINLHVMSDGTAVI 768
            R  V+ ++++L   G    A  VW+VA +  ++  A+       W +++  +S G A++
Sbjct: 547 ARYFVNVLLNYLVLMGQMNRARCVWKVAYENKLFAKAIVFDQHIAWSLDVRSLSVGAALV 606

Query: 769 ALSRTLAWFRKQMLISGVGPSRIDIVTG 796
           A   TL  FRK+ML  GV P RI +VTG
Sbjct: 607 ATVHTLHRFRKRMLYYGVVPRRIKLVTG 634



 Score = 92.0 bits (227), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 58/208 (27%), Positives = 100/208 (48%), Gaps = 2/208 (0%)

Query: 449 AMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPN--LVTYNIM 506
           A ++  +M  +G + D  TY + +  L +AG + AA ++F EM  +  I    +  Y++M
Sbjct: 179 AFEVLDEMATSGCALDESTYELAVPALARAGRIDAARKMFDEMKQREGIGRAPVGVYSVM 238

Query: 507 IALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNW 566
           + + AKA    +A+ +YR+M   G        + ++E L   G LD    ++ EMRR   
Sbjct: 239 VDVLAKAGRLDAAMGMYREMVAVGHRVSTAVSTAMVEALVRSGKLDAGMELWEEMRRGGL 298

Query: 567 VPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYH 626
            P   +Y ++V+   ++G +  A + +  M ++G  P   T   L+      GQ+  A  
Sbjct: 299 RPSFGLYTMVVEANARSGRLDMAAKLFGDMEKSGFFPTPATYACLVEMHASAGQVDAAMR 358

Query: 627 LLQGMLNLGLKPSLQTYTLLLSCCTEAR 654
           L   M N G +P L T+T LL+     R
Sbjct: 359 LYHSMANAGTRPGLSTFTALLTMLANKR 386


>gi|168002263|ref|XP_001753833.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162694809|gb|EDQ81155.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 779

 Score =  181 bits (458), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 148/532 (27%), Positives = 230/532 (43%), Gaps = 41/532 (7%)

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
           +AG   D  TY  +V I G+A +   + +LL +M + G  P+VV YN LI +YGRA    
Sbjct: 208 EAGVVPDSITYNALVDIYGQADRHEGVGELLREMEQAGNAPDVVAYNILIEAYGRAGKYR 267

Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
            A  +FKQMQ  GC PD VT+ TL++ + K G  D    ++  M+  G  PD  TY+ +I
Sbjct: 268 AAAKMFKQMQEAGCTPDVVTFSTLLEAYGKHGCYDEVRLLFTDMKERGTEPDVNTYNTLI 327

Query: 473 NCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFE 532
              G+ G  Q +  LF ++++ G  P++ TY  ++    K   +++A K++R M  +   
Sbjct: 328 QVFGQGGFFQESINLFWDLLDGGVEPDMSTYAGLLYSCGKGGLHKAAKKIHRHMLQSYVT 387

Query: 533 PDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEW 592
           P    ++ ++   G+     EA   F  M+     PD   Y  L+      G   +A   
Sbjct: 388 PTTDGFTGLITAYGNAALYSEATYAFNSMKESGCKPDLETYNALIGAHAGGGLYCEAGSA 447

Query: 593 YEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDA------------------YHLLQGM--- 631
           Y  M+  G+  +V T NSL+ AF R G   DA                  Y  L G+   
Sbjct: 448 YLTMIDEGISADVSTYNSLIEAFGRGGLFDDAIEFSRDMEEARCSPNRHTYEALMGVYCT 507

Query: 632 -----------LNL---GLKPSLQTYTLLLSCCTEARSPYDMGFCHELMAVSGHPAHMFL 677
                      L+L   G  PS+ +Y LLLS C       D     E M     P+   +
Sbjct: 508 AGLFDEAKAQFLDLQVGGELPSVDSYCLLLSVCARRNRWDDASKVLEEMLEPNMPSIYGV 567

Query: 678 LSMPSPGP--DGQNVRDHVGSFLEMMHSEDRESKRGLVDAVVDFLHKSGLKEEAGSVWEV 735
           +     G   DG N +  V    + +  +   S     +A+++ L   G +E A  V+  
Sbjct: 568 VGGILKGEMDDGTNWQ-RVEYAFDGLKVDGVGSNLRFYNALLEALWCLGQRERACRVFAE 626

Query: 736 AAQKNVYPDAVKEKGMSYWLINLHVMSDGTAVIALSRTLAWFRKQMLISGVGPSRIDIVT 795
           A ++ V  +A     +  W I++H MS G A+  L   LA  + ++      P  + IVT
Sbjct: 627 ARKRGVLAEAFSRSDL-MWAIDVHRMSVGAAMTTLIVWLADMKAEIDNKSTFPPLLSIVT 685

Query: 796 GWGRR--SRVTGTSLVRQAVQELLHMFSFPFFTENGNSGCFVGCGEPLNKWL 845
            WG +  +R   +    +A+   L     PF     N G  +     L KWL
Sbjct: 686 KWGDKDPNRDLKSLPAARAILGGLAAIGAPFDFAEWNEGRIITWAPVLQKWL 737



 Score =  169 bits (428), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 91/318 (28%), Positives = 165/318 (51%), Gaps = 1/318 (0%)

Query: 334 LKQLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQP 393
             Q  D   AL  F +++R    K +EH YT M+GI+GR       ++L + M  +  + 
Sbjct: 48  FAQRSDWQKALRLFKYMQRHQWCKPNEHVYTIMIGIMGREGMLDKASELFEDMPLNDVEW 107

Query: 394 NVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGF-LDVAMDM 452
           NV ++  LI++YGR      +L +  +M+     P+ +TY T+I+  AK G   +  + +
Sbjct: 108 NVYSFTALINAYGRNGQHEASLHLLARMKREKVTPNLITYNTVINACAKGGLEWEGLLGL 167

Query: 453 YKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAK 512
           + +M+  G+ PD  TY+ +++     G ++ A  +F  M   G +P+ +TYN ++ +  +
Sbjct: 168 FAQMRHEGIQPDIITYNTLLSACSSRGLVEEAGMVFRTMNEAGVVPDSITYNALVDIYGQ 227

Query: 513 ARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPV 572
           A  ++   +L R+M+ AG  PD V Y+I++E  G  G    A  +F +M+     PD   
Sbjct: 228 ADRHEGVGELLREMEQAGNAPDVVAYNILIEAYGRAGKYRAAAKMFKQMQEAGCTPDVVT 287

Query: 573 YGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGML 632
           +  L++ +GK G   +    +  M + G  P+V T N+L+  F + G   ++ +L   +L
Sbjct: 288 FSTLLEAYGKHGCYDEVRLLFTDMKERGTEPDVNTYNTLIQVFGQGGFFQESINLFWDLL 347

Query: 633 NLGLKPSLQTYTLLLSCC 650
           + G++P + TY  LL  C
Sbjct: 348 DGGVEPDMSTYAGLLYSC 365



 Score =  157 bits (397), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 86/287 (29%), Positives = 149/287 (51%), Gaps = 1/287 (0%)

Query: 362 TYTTMVGILGRA-RQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQ 420
           TY T++    +   ++  +  L  QM  +G QP+++TYN L+ +      + EA  VF+ 
Sbjct: 146 TYNTVINACAKGGLEWEGLLGLFAQMRHEGIQPDIITYNTLLSACSSRGLVEEAGMVFRT 205

Query: 421 MQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGH 480
           M   G  PD +TY  L+DI+ +A   +   ++ ++M+ AG +PD   Y+++I   G+AG 
Sbjct: 206 MNEAGVVPDSITYNALVDIYGQADRHEGVGELLREMEQAGNAPDVVAYNILIEAYGRAGK 265

Query: 481 LQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSI 540
            +AA ++F +M   GC P++VT++ ++    K   Y     L+ DM+  G EPD  TY+ 
Sbjct: 266 YRAAAKMFKQMQEAGCTPDVVTFSTLLEAYGKHGCYDEVRLLFTDMKERGTEPDVNTYNT 325

Query: 541 VMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAG 600
           +++V G  G+  E+  +F ++      PD   Y  L+   GK G  + A + +  MLQ+ 
Sbjct: 326 LIQVFGQGGFFQESINLFWDLLDGGVEPDMSTYAGLLYSCGKGGLHKAAKKIHRHMLQSY 385

Query: 601 LRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
           + P       L++A+      S+A +    M   G KP L+TY  L+
Sbjct: 386 VTPTTDGFTGLITAYGNAALYSEATYAFNSMKESGCKPDLETYNALI 432



 Score =  108 bits (269), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 73/302 (24%), Positives = 136/302 (45%), Gaps = 11/302 (3%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           ++ G + D +TY T++ + G+   F     L   ++  G +P++ TY  L++S G+    
Sbjct: 312 KERGTEPDVNTYNTLIQVFGQGGFFQESINLFWDLLDGGVEPDMSTYAGLLYSCGKGGLH 371

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
             A  + + M      P    +  LI  +  A     A   +  M+ +G  PD  TY+ +
Sbjct: 372 KAAKKIHRHMLQSYVTPTTDGFTGLITAYGNAALYSEATYAFNSMKESGCKPDLETYNAL 431

Query: 472 INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF 531
           I      G    A   +  M+++G   ++ TYN +I    +   +  A++  RDM+ A  
Sbjct: 432 IGAHAGGGLYCEAGSAYLTMIDEGISADVSTYNSLIEAFGRGGLFDDAIEFSRDMEEARC 491

Query: 532 EPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWE 591
            P++ TY  +M V    G  DEA+A F +++    +P    Y LL+ +  +    R  W+
Sbjct: 492 SPNRHTYEALMGVYCTAGLFDEAKAQFLDLQVGGELPSVDSYCLLLSVCAR----RNRWD 547

Query: 592 WYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAY------HLLQGMLNLGLKPSLQTYTL 645
               +L+  L PN+P+   ++   L+ G++ D        +   G+   G+  +L+ Y  
Sbjct: 548 DASKVLEEMLEPNMPSIYGVVGGILK-GEMDDGTNWQRVEYAFDGLKVDGVGSNLRFYNA 606

Query: 646 LL 647
           LL
Sbjct: 607 LL 608



 Score = 99.4 bits (246), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 78/286 (27%), Positives = 118/286 (41%), Gaps = 13/286 (4%)

Query: 345 GFFN------WLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTY 398
           GFF       W     G + D  TY  ++   G+     A  K+   M++    P    +
Sbjct: 334 GFFQESINLFWDLLDGGVEPDMSTYAGLLYSCGKGGLHKAAKKIHRHMLQSYVTPTTDGF 393

Query: 399 NRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQA 458
             LI +YG A   +EA   F  M+  GC+PD  TY  LI  HA  G    A   Y  M  
Sbjct: 394 TGLITAYGNAALYSEATYAFNSMKESGCKPDLETYNALIGAHAGGGLYCEAGSAYLTMID 453

Query: 459 AGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQS 518
            G+S D  TY+ +I   G+ G    A +   +M    C PN  TY  ++ +   A  +  
Sbjct: 454 EGISADVSTYNSLIEAFGRGGLFDDAIEFSRDMEEARCSPNRHTYEALMGVYCTAGLFDE 513

Query: 519 ALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVD 578
           A   + D+Q  G  P   +Y +++ V       D+A  V  EM   N +P   +YG++  
Sbjct: 514 AKAQFLDLQVGGELPSVDSYCLLLSVCARRNRWDDASKVLEEMLEPN-MPS--IYGVVGG 570

Query: 579 LWGKAGNVRKAWEWYEAMLQA----GLRPNVPTCNSLLSAFLRVGQ 620
           +     +    W+  E         G+  N+   N+LL A   +GQ
Sbjct: 571 ILKGEMDDGTNWQRVEYAFDGLKVDGVGSNLRFYNALLEALWCLGQ 616



 Score = 56.6 bits (135), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 49/210 (23%), Positives = 86/210 (40%), Gaps = 35/210 (16%)

Query: 538 YSIVMEVLGHCGYLDEAEAVFAEMRRKNWV-PDEPVYGLLVDLWGKAGNVRKAWEWYEAM 596
           +S++           +A  +F  M+R  W  P+E VY +++ + G+ G + KA E +E M
Sbjct: 41  FSLIFREFAQRSDWQKALRLFKYMQRHQWCKPNEHVYTIMIGIMGREGMLDKASELFEDM 100

Query: 597 LQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSP 656
               +  NV +  +L++A+ R GQ   + HLL  M    + P+L TY  +++ C +    
Sbjct: 101 PLNDVEWNVYSFTALINAYGRNGQHEASLHLLARMKREKVTPNLITYNTVINACAKG--- 157

Query: 657 YDMGFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRESKRGLVDAV 716
                                         G      +G F +M H E  +      + +
Sbjct: 158 ------------------------------GLEWEGLLGLFAQMRH-EGIQPDIITYNTL 186

Query: 717 VDFLHKSGLKEEAGSVWEVAAQKNVYPDAV 746
           +      GL EEAG V+    +  V PD++
Sbjct: 187 LSACSSRGLVEEAGMVFRTMNEAGVVPDSI 216


>gi|225445998|ref|XP_002267263.1| PREDICTED: pentatricopeptide repeat-containing protein At2g18940
           [Vitis vinifera]
 gi|297735424|emb|CBI17864.3| unnamed protein product [Vitis vinifera]
          Length = 821

 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 95/306 (31%), Positives = 158/306 (51%), Gaps = 1/306 (0%)

Query: 344 LGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIH 403
           LG  + +R   G + DE T +T++   GR        K   ++  +G      TYN L+ 
Sbjct: 265 LGLLDEMRSN-GLEFDEFTCSTVISACGREGLLDEARKFFARLKSEGYVAGTFTYNSLLQ 323

Query: 404 SYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSP 463
            +G+A   +EAL + K+M+   C PD VTY  L+  + +AGF +   D    M   G+ P
Sbjct: 324 VFGKAGIYSEALSILKEMEKNNCPPDLVTYNELVAAYVRAGFHEEGADFIDTMIRKGIMP 383

Query: 464 DTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLY 523
           +  TY+ +IN  GKAG    A   F +M   GC+PN+ TYN ++ +  K    +  + + 
Sbjct: 384 NAITYTTVINAYGKAGKEDKALSFFRQMKESGCVPNVCTYNAILGMLGKKSRLEEMIDML 443

Query: 524 RDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKA 583
            DM++ G  P+ VT++ ++ + G+ G       VF EM+   + P+   +  L+  +G+ 
Sbjct: 444 CDMRSNGCAPNSVTWNTMLAMCGNKGMHKYVNRVFREMKSCGFEPNRDTFNALIGAYGRC 503

Query: 584 GNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTY 643
           G+     + YE M++AG  P V T N+LL+A  R G    A  ++  M + G KP+  +Y
Sbjct: 504 GSQIDVVKMYEEMIKAGFTPCVTTYNALLNALARRGDWEAAESVILDMKSKGFKPNETSY 563

Query: 644 TLLLSC 649
           +L+L+C
Sbjct: 564 SLMLNC 569



 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 96/375 (25%), Positives = 174/375 (46%), Gaps = 71/375 (18%)

Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLI 402
           A  FF  L+ + G+     TY +++ + G+A  +     +L +M ++ C P++VTYN L+
Sbjct: 299 ARKFFARLKSE-GYVAGTFTYNSLLQVFGKAGIYSEALSILKEMEKNNCPPDLVTYNELV 357

Query: 403 HSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLS 462
            +Y RA +  E  D    M   G  P+ +TY T+I+ + KAG  D A+  +++M+ +G  
Sbjct: 358 AAYVRAGFHEEGADFIDTMIRKGIMPNAITYTTVINAYGKAGKEDKALSFFRQMKESGCV 417

Query: 463 PDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKL 522
           P+  TY+ I+  LGK   L+    + C+M + GC PN VT+N M+A+      ++   ++
Sbjct: 418 PNVCTYNAILGMLGKKSRLEEMIDMLCDMRSNGCAPNSVTWNTMLAMCGNKGMHKYVNRV 477

Query: 523 YRDMQNAGFEPDKVTYSIVMEVLGHCGY-------------------------------- 550
           +R+M++ GFEP++ T++ ++   G CG                                 
Sbjct: 478 FREMKSCGFEPNRDTFNALIGAYGRCGSQIDVVKMYEEMIKAGFTPCVTTYNALLNALAR 537

Query: 551 ---LDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVR---------------KAW-- 590
               + AE+V  +M+ K + P+E  Y L+++ + K GN R                +W  
Sbjct: 538 RGDWEAAESVILDMKSKGFKPNETSYSLMLNCYAKGGNGRGIEKIEEEIYNGHIFPSWIL 597

Query: 591 ------------------EWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGML 632
                               ++   + G +P++   NS+LS F +      A+ +L+ + 
Sbjct: 598 LRTLVLANFKRRALMGMERAFQEFCKHGYKPDLVLFNSMLSIFAKNKMYDRAHEMLRLIR 657

Query: 633 NLGLKPSLQTYTLLL 647
             GL+P L TY  L+
Sbjct: 658 ESGLQPDLVTYNSLM 672



 Score =  137 bits (344), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 88/353 (24%), Positives = 154/353 (43%), Gaps = 37/353 (10%)

Query: 332 QVLKQLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGC 391
           ++L +   H+VAL   + +  +  +  D   +TT++    R  ++     + ++M + G 
Sbjct: 182 RILGRESQHSVALRLLDEISVEE-YSLDVRAWTTILHAYSRIGKYERAITMFEKMRKTGL 240

Query: 392 QPNVVTYNRLIHSYGR-ANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAM 450
            P +VTYN ++  YG+     N+ L +  +M+  G E D  T  T+I    + G LD A 
Sbjct: 241 SPTLVTYNVMLDVYGKMGRSWNKILGLLDEMRSNGLEFDEFTCSTVISACGREGLLDEAR 300

Query: 451 DMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQ 510
             + ++++ G    TFTY+ ++   GKAG    A  +  EM    C P+LVTYN ++A  
Sbjct: 301 KFFARLKSEGYVAGTFTYNSLLQVFGKAGIYSEALSILKEMEKNNCPPDLVTYNELVAAY 360

Query: 511 AKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDE 570
            +A  ++        M   G  P+ +TY+ V+   G  G  D+A + F +M+    VP+ 
Sbjct: 361 VRAGFHEEGADFIDTMIRKGIMPNAITYTTVINAYGKAGKEDKALSFFRQMKESGCVPNV 420

Query: 571 PVYGLLVDLWGKAGNVRKAWE----------------W-------------------YEA 595
             Y  ++ + GK   + +  +                W                   +  
Sbjct: 421 CTYNAILGMLGKKSRLEEMIDMLCDMRSNGCAPNSVTWNTMLAMCGNKGMHKYVNRVFRE 480

Query: 596 MLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
           M   G  PN  T N+L+ A+ R G   D   + + M+  G  P + TY  LL+
Sbjct: 481 MKSCGFEPNRDTFNALIGAYGRCGSQIDVVKMYEEMIKAGFTPCVTTYNALLN 533



 Score =  135 bits (340), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 83/341 (24%), Positives = 158/341 (46%), Gaps = 36/341 (10%)

Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLI 402
           AL FF  ++ ++G   +  TY  ++G+LG+  +   +  +L  M  +GC PN VT+N ++
Sbjct: 404 ALSFFRQMK-ESGCVPNVCTYNAILGMLGKKSRLEEMIDMLCDMRSNGCAPNSVTWNTML 462

Query: 403 HSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLS 462
              G          VF++M+  G EP+R T+  LI  + + G     + MY++M  AG +
Sbjct: 463 AMCGNKGMHKYVNRVFREMKSCGFEPNRDTFNALIGAYGRCGSQIDVVKMYEEMIKAGFT 522

Query: 463 PDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKL 522
           P   TY+ ++N L + G  +AA  +  +M ++G  PN  +Y++M+   AK  N +   K+
Sbjct: 523 PCVTTYNALLNALARRGDWEAAESVILDMKSKGFKPNETSYSLMLNCYAKGGNGRGIEKI 582

Query: 523 YRDMQNA-----------------------------------GFEPDKVTYSIVMEVLGH 547
             ++ N                                    G++PD V ++ ++ +   
Sbjct: 583 EEEIYNGHIFPSWILLRTLVLANFKRRALMGMERAFQEFCKHGYKPDLVLFNSMLSIFAK 642

Query: 548 CGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPT 607
               D A  +   +R     PD   Y  L+D++ + G   K  E  + + ++G +P++ +
Sbjct: 643 NKMYDRAHEMLRLIRESGLQPDLVTYNSLMDMYARGGECWKGEEILKGIQKSGGKPDLVS 702

Query: 608 CNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
            N+++  F R G + +A   L  M   G++P + TY   ++
Sbjct: 703 YNTVIKGFCRQGLMQEAIRTLSEMTISGIRPCIVTYNTFVA 743



 Score = 89.4 bits (220), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 56/241 (23%), Positives = 112/241 (46%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           +  GFK +E +Y+ M+    +      I K+ +++      P+ +    L+ +  +   L
Sbjct: 552 KSKGFKPNETSYSLMLNCYAKGGNGRGIEKIEEEIYNGHIFPSWILLRTLVLANFKRRAL 611

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
                 F++    G +PD V + +++ I AK    D A +M + ++ +GL PD  TY+ +
Sbjct: 612 MGMERAFQEFCKHGYKPDLVLFNSMLSIFAKNKMYDRAHEMLRLIRESGLQPDLVTYNSL 671

Query: 472 INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF 531
           ++   + G      ++   +   G  P+LV+YN +I    +    Q A++   +M  +G 
Sbjct: 672 MDMYARGGECWKGEEILKGIQKSGGKPDLVSYNTVIKGFCRQGLMQEAIRTLSEMTISGI 731

Query: 532 EPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWE 591
            P  VTY+  +      G   E E V + M + +  P+E  Y ++VD + K    ++A +
Sbjct: 732 RPCIVTYNTFVAGYSGKGMFSEVEEVISYMIQHDCRPNELTYKIVVDGYCKGKKYKEAMD 791

Query: 592 W 592
           +
Sbjct: 792 F 792



 Score = 88.2 bits (217), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 66/318 (20%), Positives = 131/318 (41%), Gaps = 35/318 (11%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           +  GF+ +  T+  ++G  GR      + K+ ++M++ G  P V TYN L+++  R    
Sbjct: 482 KSCGFEPNRDTFNALIGAYGRCGSQIDVVKMYEEMIKAGFTPCVTTYNALLNALARRGDW 541

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAG-----------------------FLDV 448
             A  V   M+  G +P+  +Y  +++ +AK G                          +
Sbjct: 542 EAAESVILDMKSKGFKPNETSYSLMLNCYAKGGNGRGIEKIEEEIYNGHIFPSWILLRTL 601

Query: 449 AMDMYKK-----MQAA-------GLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGC 496
            +  +K+     M+ A       G  PD   ++ +++   K      AH++   +   G 
Sbjct: 602 VLANFKRRALMGMERAFQEFCKHGYKPDLVLFNSMLSIFAKNKMYDRAHEMLRLIRESGL 661

Query: 497 IPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEA 556
            P+LVTYN ++ + A+        ++ + +Q +G +PD V+Y+ V++     G + EA  
Sbjct: 662 QPDLVTYNSLMDMYARGGECWKGEEILKGIQKSGGKPDLVSYNTVIKGFCRQGLMQEAIR 721

Query: 557 VFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFL 616
             +EM      P    Y   V  +   G   +  E    M+Q   RPN  T   ++  + 
Sbjct: 722 TLSEMTISGIRPCIVTYNTFVAGYSGKGMFSEVEEVISYMIQHDCRPNELTYKIVVDGYC 781

Query: 617 RVGQLSDAYHLLQGMLNL 634
           +  +  +A   +  +  +
Sbjct: 782 KGKKYKEAMDFVSNITEM 799



 Score = 41.6 bits (96), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 39/185 (21%), Positives = 75/185 (40%), Gaps = 3/185 (1%)

Query: 564 KNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSD 623
           +N   D  +  L+V + G+      A    + +       +V    ++L A+ R+G+   
Sbjct: 168 RNEKIDNQLVELMVRILGRESQHSVALRLLDEISVEEYSLDVRAWTTILHAYSRIGKYER 227

Query: 624 AYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYD--MGFCHELMAVSGHPAHMFLLSMP 681
           A  + + M   GL P+L TY ++L    +    ++  +G   E M  +G     F  S  
Sbjct: 228 AITMFEKMRKTGLSPTLVTYNVMLDVYGKMGRSWNKILGLLDE-MRSNGLEFDEFTCSTV 286

Query: 682 SPGPDGQNVRDHVGSFLEMMHSEDRESKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNV 741
                 + + D    F   + SE   +     ++++    K+G+  EA S+ +   + N 
Sbjct: 287 ISACGREGLLDEARKFFARLKSEGYVAGTFTYNSLLQVFGKAGIYSEALSILKEMEKNNC 346

Query: 742 YPDAV 746
            PD V
Sbjct: 347 PPDLV 351


>gi|326491875|dbj|BAJ98162.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 628

 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 117/381 (30%), Positives = 191/381 (50%), Gaps = 11/381 (2%)

Query: 299 ESVSRILRQWKWGPLAEEALGNTNYSMDAYQANQVLKQLQDHTVALGFFNWLRRQAGFKH 358
           E   RIL+ +KWGP AE+AL      +D +   +V+K     +V + FF W  R+  ++H
Sbjct: 58  ERFIRILKIFKWGPDAEKALEVLMMKVDHWLVREVMKTDVGVSVKMQFFRWAARKRNYEH 117

Query: 359 DEHTYTTMVGILGRARQFGAINKLLDQMVRDG-CQPNVVTYNRLIHSYGRANYLNEALDV 417
           D  TY  ++  L    Q+G + K++ +MVR+  C    +  + +I   G A  +++A+ +
Sbjct: 118 DTSTYMALIRCLEVVEQYGEMWKMIQEMVRNPVCVVTPMELSDIIRMLGNAKMISKAVAI 177

Query: 418 FKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLS-PDTFTYSVIINCLG 476
           F Q++   C+P    Y ++I +    G  +   ++Y +M   G   PDT TYS +I+   
Sbjct: 178 FYQIKARKCQPTAHAYNSMIIMLMHEGEYEKVHELYNEMSNEGQCFPDTVTYSALISAFC 237

Query: 477 KAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKV 536
           K G   +A  L  EM + G  P    Y +++AL  K  N   AL L+ +M++    PD  
Sbjct: 238 KLGRQDSAIWLLNEMKDNGMQPTAKIYTMLMALLFKLDNVHGALGLFEEMRHQYCRPDVF 297

Query: 537 TYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAM 596
           TY+ ++  LG  G LDEA   F EMRR+   PD  +   +++  GKAG +  A + +E M
Sbjct: 298 TYTELIRGLGKAGRLDEAYNFFHEMRREGCRPDTVLMNNMINFLGKAGRLDDAIKLFEEM 357

Query: 597 LQAGLRPNVPTCNSLLSAFL----RVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS-CCT 651
                 P+V T N+++ A      RV ++S  +  ++G    G+ PS  TY++L+   C 
Sbjct: 358 ETLRCIPSVVTYNTIIKALFESKSRVSEISSWFERMKGS---GISPSPFTYSILIDGFCK 414

Query: 652 EARSPYDMGFCHELMAVSGHP 672
             R+   M    E M   G P
Sbjct: 415 TNRTEKAMMLLEE-MDEKGFP 434



 Score =  145 bits (366), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 88/312 (28%), Positives = 147/312 (47%), Gaps = 4/312 (1%)

Query: 349 WL---RRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSY 405
           WL    +  G +     YT ++ +L +         L ++M    C+P+V TY  LI   
Sbjct: 247 WLLNEMKDNGMQPTAKIYTMLMALLFKLDNVHGALGLFEEMRHQYCRPDVFTYTELIRGL 306

Query: 406 GRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDT 465
           G+A  L+EA + F +M+  GC PD V    +I+   KAG LD A+ ++++M+     P  
Sbjct: 307 GKAGRLDEAYNFFHEMRREGCRPDTVLMNNMINFLGKAGRLDDAIKLFEEMETLRCIPSV 366

Query: 466 FTYSVIINCLGKA-GHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYR 524
            TY+ II  L ++   +      F  M   G  P+  TY+I+I    K    + A+ L  
Sbjct: 367 VTYNTIIKALFESKSRVSEISSWFERMKGSGISPSPFTYSILIDGFCKTNRTEKAMMLLE 426

Query: 525 DMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAG 584
           +M   GF P    Y  +++ LG     D A  +F E++         VY +++   GKAG
Sbjct: 427 EMDEKGFPPCPAAYCSLIDALGKAKRYDLANELFQELKENCGSSSARVYAVMIKHLGKAG 486

Query: 585 NVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYT 644
            +  A + ++ M + G  PNV   N+L+S   R G L +A   ++ M + G  P + +Y 
Sbjct: 487 RLDDAVDLFDEMNRLGCTPNVYAYNALMSGLARAGMLDEALTTMRRMQDHGCIPDINSYN 546

Query: 645 LLLSCCTEARSP 656
           ++L+   +   P
Sbjct: 547 IILNALAKTGGP 558



 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 95/324 (29%), Positives = 168/324 (51%), Gaps = 6/324 (1%)

Query: 333 VLKQLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQ 392
           +L +L +   ALG F  +R Q   + D  TYT ++  LG+A +         +M R+GC+
Sbjct: 270 LLFKLDNVHGALGLFEEMRHQYC-RPDVFTYTELIRGLGKAGRLDEAYNFFHEMRREGCR 328

Query: 393 PNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLID--IHAKAGFLDVAM 450
           P+ V  N +I+  G+A  L++A+ +F++M+ + C P  VTY T+I     +K+   +++ 
Sbjct: 329 PDTVLMNNMINFLGKAGRLDDAIKLFEEMETLRCIPSVVTYNTIIKALFESKSRVSEIS- 387

Query: 451 DMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQ 510
             +++M+ +G+SP  FTYS++I+   K    + A  L  EM  +G  P    Y  +I   
Sbjct: 388 SWFERMKGSGISPSPFTYSILIDGFCKTNRTEKAMMLLEEMDEKGFPPCPAAYCSLIDAL 447

Query: 511 AKARNYQSALKLYRDM-QNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPD 569
            KA+ Y  A +L++++ +N G    +V Y+++++ LG  G LD+A  +F EM R    P+
Sbjct: 448 GKAKRYDLANELFQELKENCGSSSARV-YAVMIKHLGKAGRLDDAVDLFDEMNRLGCTPN 506

Query: 570 EPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQ 629
              Y  L+    +AG + +A      M   G  P++ + N +L+A  + G    A  +L 
Sbjct: 507 VYAYNALMSGLARAGMLDEALTTMRRMQDHGCIPDINSYNIILNALAKTGGPDRAMGMLC 566

Query: 630 GMLNLGLKPSLQTYTLLLSCCTEA 653
            M    +KP   +Y  +L   + A
Sbjct: 567 NMKQSAIKPDAVSYNTVLGALSHA 590



 Score =  121 bits (303), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 89/314 (28%), Positives = 140/314 (44%), Gaps = 37/314 (11%)

Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNR-- 400
           A  FF+ +RR+ G + D      M+  LG+A +     KL ++M    C P+VVTYN   
Sbjct: 315 AYNFFHEMRRE-GCRPDTVLMNNMINFLGKAGRLDDAIKLFEEMETLRCIPSVVTYNTII 373

Query: 401 ----------------------------------LIHSYGRANYLNEALDVFKQMQVVGC 426
                                             LI  + + N   +A+ + ++M   G 
Sbjct: 374 KALFESKSRVSEISSWFERMKGSGISPSPFTYSILIDGFCKTNRTEKAMMLLEEMDEKGF 433

Query: 427 EPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQ 486
            P    YC+LID   KA   D+A +++++++    S     Y+V+I  LGKAG L  A  
Sbjct: 434 PPCPAAYCSLIDALGKAKRYDLANELFQELKENCGSSSARVYAVMIKHLGKAGRLDDAVD 493

Query: 487 LFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLG 546
           LF EM   GC PN+  YN +++  A+A     AL   R MQ+ G  PD  +Y+I++  L 
Sbjct: 494 LFDEMNRLGCTPNVYAYNALMSGLARAGMLDEALTTMRRMQDHGCIPDINSYNIILNALA 553

Query: 547 HCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVP 606
             G  D A  +   M++    PD   Y  ++     AG   +A +  + M   G   ++ 
Sbjct: 554 KTGGPDRAMGMLCNMKQSAIKPDAVSYNTVLGALSHAGMFEEAAKLMKEMNAIGFDYDLI 613

Query: 607 TCNSLLSAFLRVGQ 620
           T +S+L A  +V Q
Sbjct: 614 TYSSILEAIGKVDQ 627


>gi|147825385|emb|CAN75494.1| hypothetical protein VITISV_030525 [Vitis vinifera]
          Length = 821

 Score =  180 bits (457), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 95/306 (31%), Positives = 158/306 (51%), Gaps = 1/306 (0%)

Query: 344 LGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIH 403
           LG  + +R   G + DE T +T++   GR        K   ++  +G      TYN L+ 
Sbjct: 265 LGLLDEMRSN-GLEFDEFTCSTVISACGREGLLDEARKFFARLKSEGYVAGTFTYNSLLQ 323

Query: 404 SYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSP 463
            +G+A   +EAL + K+M+   C PD VTY  L+  + +AGF +   D    M   G+ P
Sbjct: 324 VFGKAGIYSEALSILKEMEKNNCPPDLVTYNELVAAYVRAGFHEEGADFIDTMIRKGIMP 383

Query: 464 DTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLY 523
           +  TY+ +IN  GKAG    A   F +M   GC+PN+ TYN ++ +  K    +  + + 
Sbjct: 384 NAITYTTVINAYGKAGKEDKALSFFRQMKESGCVPNVCTYNAILGMLGKKSRLEEMIDML 443

Query: 524 RDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKA 583
            DM++ G  P+ VT++ ++ + G+ G       VF EM+   + P+   +  L+  +G+ 
Sbjct: 444 CDMRSNGCAPNSVTWNTMLAMCGNKGMHKYVNRVFREMKSCGFEPNRDTFNALIGAYGRC 503

Query: 584 GNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTY 643
           G+     + YE M++AG  P V T N+LL+A  R G    A  ++  M + G KP+  +Y
Sbjct: 504 GSQIDVVKMYEEMIKAGFTPCVTTYNALLNALARRGDWEAAESVILDMKSKGFKPNETSY 563

Query: 644 TLLLSC 649
           +L+L+C
Sbjct: 564 SLMLNC 569



 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 96/375 (25%), Positives = 174/375 (46%), Gaps = 71/375 (18%)

Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLI 402
           A  FF  L+ + G+     TY +++ + G+A  +     +L +M ++ C P++VTYN L+
Sbjct: 299 ARKFFARLKSE-GYVAGTFTYNSLLQVFGKAGIYSEALSILKEMEKNNCPPDLVTYNELV 357

Query: 403 HSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLS 462
            +Y RA +  E  D    M   G  P+ +TY T+I+ + KAG  D A+  +++M+ +G  
Sbjct: 358 AAYVRAGFHEEGADFIDTMIRKGIMPNAITYTTVINAYGKAGKEDKALSFFRQMKESGCV 417

Query: 463 PDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKL 522
           P+  TY+ I+  LGK   L+    + C+M + GC PN VT+N M+A+      ++   ++
Sbjct: 418 PNVCTYNAILGMLGKKSRLEEMIDMLCDMRSNGCAPNSVTWNTMLAMCGNKGMHKYVNRV 477

Query: 523 YRDMQNAGFEPDKVTYSIVMEVLGHCGY-------------------------------- 550
           +R+M++ GFEP++ T++ ++   G CG                                 
Sbjct: 478 FREMKSCGFEPNRDTFNALIGAYGRCGSQIDVVKMYEEMIKAGFTPCVTTYNALLNALAR 537

Query: 551 ---LDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVR---------------KAW-- 590
               + AE+V  +M+ K + P+E  Y L+++ + K GN R                +W  
Sbjct: 538 RGDWEAAESVILDMKSKGFKPNETSYSLMLNCYAKGGNGRGIEKIEEEIYNGHIFPSWIL 597

Query: 591 ------------------EWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGML 632
                               ++   + G +P++   NS+LS F +      A+ +L+ + 
Sbjct: 598 LRTLVLANFKRRALMGMERAFQEFCKHGYKPDLVLFNSMLSIFAKNKMYDRAHEMLRLIR 657

Query: 633 NLGLKPSLQTYTLLL 647
             GL+P L TY  L+
Sbjct: 658 ESGLQPDLVTYNSLM 672



 Score =  136 bits (343), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 88/353 (24%), Positives = 154/353 (43%), Gaps = 37/353 (10%)

Query: 332 QVLKQLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGC 391
           ++L +   H+VAL   + +  +  +  D   +TT++    R  ++     + ++M + G 
Sbjct: 182 RILGRESQHSVALRLLDEISVEE-YSLDVRAWTTILHAYSRIGKYERAITMFEKMRKTGL 240

Query: 392 QPNVVTYNRLIHSYGR-ANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAM 450
            P +VTYN ++  YG+     N+ L +  +M+  G E D  T  T+I    + G LD A 
Sbjct: 241 SPTLVTYNVMLDVYGKMGRSWNKILGLLDEMRSNGLEFDEFTCSTVISACGREGLLDEAR 300

Query: 451 DMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQ 510
             + ++++ G    TFTY+ ++   GKAG    A  +  EM    C P+LVTYN ++A  
Sbjct: 301 KFFARLKSEGYVAGTFTYNSLLQVFGKAGIYSEALSILKEMEKNNCPPDLVTYNELVAAY 360

Query: 511 AKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDE 570
            +A  ++        M   G  P+ +TY+ V+   G  G  D+A + F +M+    VP+ 
Sbjct: 361 VRAGFHEEGADFIDTMIRKGIMPNAITYTTVINAYGKAGKEDKALSFFRQMKESGCVPNV 420

Query: 571 PVYGLLVDLWGKAGNVRKAWE----------------W-------------------YEA 595
             Y  ++ + GK   + +  +                W                   +  
Sbjct: 421 CTYNAILGMLGKKSRLEEMIDMLCDMRSNGCAPNSVTWNTMLAMCGNKGMHKYVNRVFRE 480

Query: 596 MLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
           M   G  PN  T N+L+ A+ R G   D   + + M+  G  P + TY  LL+
Sbjct: 481 MKSCGFEPNRDTFNALIGAYGRCGSQIDVVKMYEEMIKAGFTPCVTTYNALLN 533



 Score =  135 bits (339), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 83/341 (24%), Positives = 158/341 (46%), Gaps = 36/341 (10%)

Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLI 402
           AL FF  ++ ++G   +  TY  ++G+LG+  +   +  +L  M  +GC PN VT+N ++
Sbjct: 404 ALSFFRQMK-ESGCVPNVCTYNAILGMLGKKSRLEEMIDMLCDMRSNGCAPNSVTWNTML 462

Query: 403 HSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLS 462
              G          VF++M+  G EP+R T+  LI  + + G     + MY++M  AG +
Sbjct: 463 AMCGNKGMHKYVNRVFREMKSCGFEPNRDTFNALIGAYGRCGSQIDVVKMYEEMIKAGFT 522

Query: 463 PDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKL 522
           P   TY+ ++N L + G  +AA  +  +M ++G  PN  +Y++M+   AK  N +   K+
Sbjct: 523 PCVTTYNALLNALARRGDWEAAESVILDMKSKGFKPNETSYSLMLNCYAKGGNGRGIEKI 582

Query: 523 YRDMQNA-----------------------------------GFEPDKVTYSIVMEVLGH 547
             ++ N                                    G++PD V ++ ++ +   
Sbjct: 583 EEEIYNGHIFPSWILLRTLVLANFKRRALMGMERAFQEFCKHGYKPDLVLFNSMLSIFAK 642

Query: 548 CGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPT 607
               D A  +   +R     PD   Y  L+D++ + G   K  E  + + ++G +P++ +
Sbjct: 643 NKMYDRAHEMLRLIRESGLQPDLVTYNSLMDMYARGGECWKGEEILKGIQKSGGKPDLVS 702

Query: 608 CNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
            N+++  F R G + +A   L  M   G++P + TY   ++
Sbjct: 703 YNTVIKGFCRQGLMQEAIRTLSEMTISGIRPCIVTYNTFVA 743



 Score = 89.4 bits (220), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 56/241 (23%), Positives = 112/241 (46%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           +  GFK +E +Y+ M+    +      I K+ +++      P+ +    L+ +  +   L
Sbjct: 552 KSKGFKPNETSYSLMLNCYAKGGNGRGIEKIEEEIYNGHIFPSWILLRTLVLANFKRRAL 611

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
                 F++    G +PD V + +++ I AK    D A +M + ++ +GL PD  TY+ +
Sbjct: 612 MGMERAFQEFCKHGYKPDLVLFNSMLSIFAKNKMYDRAHEMLRLIRESGLQPDLVTYNSL 671

Query: 472 INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF 531
           ++   + G      ++   +   G  P+LV+YN +I    +    Q A++   +M  +G 
Sbjct: 672 MDMYARGGECWKGEEILKGIQKSGGKPDLVSYNTVIKGFCRQGLMQEAIRTLSEMTISGI 731

Query: 532 EPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWE 591
            P  VTY+  +      G   E E V + M + +  P+E  Y ++VD + K    ++A +
Sbjct: 732 RPCIVTYNTFVAGYSGKGMFSEVEEVISYMIQHDCRPNELTYKIVVDGYCKGKKYKEAMD 791

Query: 592 W 592
           +
Sbjct: 792 F 792



 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 66/318 (20%), Positives = 131/318 (41%), Gaps = 35/318 (11%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           +  GF+ +  T+  ++G  GR      + K+ ++M++ G  P V TYN L+++  R    
Sbjct: 482 KSCGFEPNRDTFNALIGAYGRCGSQIDVVKMYEEMIKAGFTPCVTTYNALLNALARRGDW 541

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAG-----------------------FLDV 448
             A  V   M+  G +P+  +Y  +++ +AK G                          +
Sbjct: 542 EAAESVILDMKSKGFKPNETSYSLMLNCYAKGGNGRGIEKIEEEIYNGHIFPSWILLRTL 601

Query: 449 AMDMYKK-----MQAA-------GLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGC 496
            +  +K+     M+ A       G  PD   ++ +++   K      AH++   +   G 
Sbjct: 602 VLANFKRRALMGMERAFQEFCKHGYKPDLVLFNSMLSIFAKNKMYDRAHEMLRLIRESGL 661

Query: 497 IPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEA 556
            P+LVTYN ++ + A+        ++ + +Q +G +PD V+Y+ V++     G + EA  
Sbjct: 662 QPDLVTYNSLMDMYARGGECWKGEEILKGIQKSGGKPDLVSYNTVIKGFCRQGLMQEAIR 721

Query: 557 VFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFL 616
             +EM      P    Y   V  +   G   +  E    M+Q   RPN  T   ++  + 
Sbjct: 722 TLSEMTISGIRPCIVTYNTFVAGYSGKGMFSEVEEVISYMIQHDCRPNELTYKIVVDGYC 781

Query: 617 RVGQLSDAYHLLQGMLNL 634
           +  +  +A   +  +  +
Sbjct: 782 KGKKYKEAMDFVSNITEM 799



 Score = 41.6 bits (96), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 39/185 (21%), Positives = 75/185 (40%), Gaps = 3/185 (1%)

Query: 564 KNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSD 623
           +N   D  +  L+V + G+      A    + +       +V    ++L A+ R+G+   
Sbjct: 168 RNEKIDNQLVELMVRILGRESQHSVALRLLDEISVEEYSLDVRAWTTILHAYSRIGKYER 227

Query: 624 AYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYD--MGFCHELMAVSGHPAHMFLLSMP 681
           A  + + M   GL P+L TY ++L    +    ++  +G   E M  +G     F  S  
Sbjct: 228 AITMFEKMRKTGLSPTLVTYNVMLDVYGKMGRSWNKILGLLDE-MRSNGLEFDEFTCSTV 286

Query: 682 SPGPDGQNVRDHVGSFLEMMHSEDRESKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNV 741
                 + + D    F   + SE   +     ++++    K+G+  EA S+ +   + N 
Sbjct: 287 ISACGREGLLDEARKFFARLKSEGYVAGTFTYNSLLQVFGKAGIYSEALSILKEMEKNNC 346

Query: 742 YPDAV 746
            PD V
Sbjct: 347 PPDLV 351


>gi|449530359|ref|XP_004172163.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g02860-like [Cucumis sativus]
          Length = 831

 Score =  180 bits (457), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 94/296 (31%), Positives = 158/296 (53%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           + +G   D +TY T++    R   +    ++ ++M   G  P+ VTYN L+  YG++   
Sbjct: 283 KSSGVAPDLYTYNTLISSCRRGSLYEEAAEVFEEMKAAGFSPDKVTYNALLDVYGKSRRP 342

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
            EA++V K+M+  G  P  VTY +LI  +A+ G LD AM++  +M   G+ PD FTY+ +
Sbjct: 343 REAMEVLKEMEASGFAPSIVTYNSLISAYARDGLLDEAMELKSQMVKKGIKPDVFTYTTL 402

Query: 472 INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF 531
           ++   K G    A ++F EM   GC PN+ T+N +I +     N+   +K++ +++    
Sbjct: 403 LSGFEKTGKDDYAMKVFEEMRVAGCQPNICTFNALIKMHGNRGNFVEMMKVFEEIKICEC 462

Query: 532 EPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWE 591
            PD VT++ ++ V G  G   E   VF EM+R  +VP+   +  L+  + + G   +A  
Sbjct: 463 VPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERDTFNTLISAYSRCGFFDQAMA 522

Query: 592 WYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
            Y  ML AG+ P++ T N++L+A  R G    +  +L  M +   KP+  TY  LL
Sbjct: 523 IYRRMLDAGVTPDLSTYNAVLAALARGGLWEQSEKVLAEMKDGRCKPNELTYCSLL 578



 Score =  149 bits (375), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 81/304 (26%), Positives = 155/304 (50%), Gaps = 1/304 (0%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           R AG + +  T+  ++ + G    F  + K+ +++    C P++VT+N L+  +G+    
Sbjct: 423 RVAGCQPNICTFNALIKMHGNRGNFVEMMKVFEEIKICECVPDIVTWNTLLAVFGQNGMD 482

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
           +E   VFK+M+  G  P+R T+ TLI  +++ GF D AM +Y++M  AG++PD  TY+ +
Sbjct: 483 SEVSGVFKEMKRAGFVPERDTFNTLISAYSRCGFFDQAMAIYRRMLDAGVTPDLSTYNAV 542

Query: 472 INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF 531
           +  L + G  + + ++  EM +  C PN +TY  ++   A  +  +    L  ++ +   
Sbjct: 543 LAALARGGLWEQSEKVLAEMKDGRCKPNELTYCSLLHAYANGKEVERMSALAEEIYSGII 602

Query: 532 EPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWE 591
           EP  V    ++ V      L E E  F E+R + + PD      +V ++G+   V K  E
Sbjct: 603 EPQAVLLKTLVLVYSKSDLLTETERAFLELREQGFSPDITTLNAMVSIYGRRRMVSKTNE 662

Query: 592 WYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTY-TLLLSCC 650
               +  +G  P++ T NSL+  + R      +  +L+ ++  G+KP + ++ T++ + C
Sbjct: 663 ILNFIKDSGFTPSLTTYNSLMYMYSRTEHFEKSEDILREIIAKGMKPDIISFNTVIFAYC 722

Query: 651 TEAR 654
              R
Sbjct: 723 RNGR 726



 Score =  147 bits (370), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 80/268 (29%), Positives = 142/268 (52%), Gaps = 8/268 (2%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           + AGF  D+ TY  ++ + G++R+     ++L +M   G  P++VTYN LI +Y R   L
Sbjct: 318 KAAGFSPDKVTYNALLDVYGKSRRPREAMEVLKEMEASGFAPSIVTYNSLISAYARDGLL 377

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
           +EA+++  QM   G +PD  TY TL+    K G  D AM ++++M+ AG  P+  T++ +
Sbjct: 378 DEAMELKSQMVKKGIKPDVFTYTTLLSGFEKTGKDDYAMKVFEEMRVAGCQPNICTFNAL 437

Query: 472 INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF 531
           I   G  G+     ++F E+    C+P++VT+N ++A+  +         ++++M+ AGF
Sbjct: 438 IKMHGNRGNFVEMMKVFEEIKICECVPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGF 497

Query: 532 EPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWE 591
            P++ T++ ++     CG+ D+A A++  M      PD   Y  ++    + G     WE
Sbjct: 498 VPERDTFNTLISAYSRCGFFDQAMAIYRRMLDAGVTPDLSTYNAVLAALARGG----LWE 553

Query: 592 WYEAML----QAGLRPNVPTCNSLLSAF 615
             E +L        +PN  T  SLL A+
Sbjct: 554 QSEKVLAEMKDGRCKPNELTYCSLLHAY 581



 Score =  139 bits (350), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 92/357 (25%), Positives = 174/357 (48%), Gaps = 13/357 (3%)

Query: 300 SVSRILRQWKWGPLAEEALGNTNYSMDA--YQANQVLKQL---QDHTVALGFFNWLRRQA 354
           S+  IL Q     L E +    N++ D+  +    ++K L   + + +AL  F ++R + 
Sbjct: 123 SLDEILLQ-----LFETSSDGLNFTSDSVSFDILGIIKGLVFYKKNELALCVFYFVRNRE 177

Query: 355 GFKH--DEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
            F           ++ +LG+  +      LL  +  DG   ++  Y  LI +Y       
Sbjct: 178 DFASILSNSVVAVIISVLGKEGRASFAASLLHDLRNDGVHIDIYAYTSLITAYASNGRYR 237

Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGF-LDVAMDMYKKMQAAGLSPDTFTYSVI 471
           EA+ VFK+++  GC P  +TY  +++++ K G        +   M+++G++PD +TY+ +
Sbjct: 238 EAVMVFKKLEEEGCRPTLITYNVILNVYGKMGMPWSKIAGLVDSMKSSGVAPDLYTYNTL 297

Query: 472 INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF 531
           I+   +    + A ++F EM   G  P+ VTYN ++ +  K+R  + A+++ ++M+ +GF
Sbjct: 298 ISSCRRGSLYEEAAEVFEEMKAAGFSPDKVTYNALLDVYGKSRRPREAMEVLKEMEASGF 357

Query: 532 EPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWE 591
            P  VTY+ ++      G LDEA  + ++M +K   PD   Y  L+  + K G    A +
Sbjct: 358 APSIVTYNSLISAYARDGLLDEAMELKSQMVKKGIKPDVFTYTTLLSGFEKTGKDDYAMK 417

Query: 592 WYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
            +E M  AG +PN+ T N+L+      G   +   + + +      P + T+  LL+
Sbjct: 418 VFEEMRVAGCQPNICTFNALIKMHGNRGNFVEMMKVFEEIKICECVPDIVTWNTLLA 474



 Score =  117 bits (293), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 65/303 (21%), Positives = 145/303 (47%), Gaps = 1/303 (0%)

Query: 345 GFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHS 404
           G F  ++R AGF  +  T+ T++    R   F     +  +M+  G  P++ TYN ++ +
Sbjct: 487 GVFKEMKR-AGFVPERDTFNTLISAYSRCGFFDQAMAIYRRMLDAGVTPDLSTYNAVLAA 545

Query: 405 YGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPD 464
             R     ++  V  +M+   C+P+ +TYC+L+  +A    ++    + +++ +  + P 
Sbjct: 546 LARGGLWEQSEKVLAEMKDGRCKPNELTYCSLLHAYANGKEVERMSALAEEIYSGIIEPQ 605

Query: 465 TFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYR 524
                 ++    K+  L    + F E+  QG  P++ T N M+++  + R      ++  
Sbjct: 606 AVLLKTLVLVYSKSDLLTETERAFLELREQGFSPDITTLNAMVSIYGRRRMVSKTNEILN 665

Query: 525 DMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAG 584
            ++++GF P   TY+ +M +     + +++E +  E+  K   PD   +  ++  + + G
Sbjct: 666 FIKDSGFTPSLTTYNSLMYMYSRTEHFEKSEDILREIIAKGMKPDIISFNTVIFAYCRNG 725

Query: 585 NVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYT 644
            +++A   +  M   GL P+V T N+ ++++       +A  +++ M+    KP+  TY 
Sbjct: 726 RMKEASRIFAEMKDFGLAPDVITYNTFIASYASDSMFIEAIDVVKYMIKNECKPNQNTYN 785

Query: 645 LLL 647
            L+
Sbjct: 786 SLI 788



 Score =  114 bits (286), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 69/296 (23%), Positives = 141/296 (47%), Gaps = 6/296 (2%)

Query: 345 GFFNW----LRR--QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTY 398
           GFF+      RR   AG   D  TY  ++  L R   +    K+L +M    C+PN +TY
Sbjct: 515 GFFDQAMAIYRRMLDAGVTPDLSTYNAVLAALARGGLWEQSEKVLAEMKDGRCKPNELTY 574

Query: 399 NRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQA 458
             L+H+Y     +     + +++     EP  V   TL+ +++K+  L      + +++ 
Sbjct: 575 CSLLHAYANGKEVERMSALAEEIYSGIIEPQAVLLKTLVLVYSKSDLLTETERAFLELRE 634

Query: 459 AGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQS 518
            G SPD  T + +++  G+   +   +++   + + G  P+L TYN ++ + ++  +++ 
Sbjct: 635 QGFSPDITTLNAMVSIYGRRRMVSKTNEILNFIKDSGFTPSLTTYNSLMYMYSRTEHFEK 694

Query: 519 ALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVD 578
           +  + R++   G +PD ++++ V+      G + EA  +FAEM+     PD   Y   + 
Sbjct: 695 SEDILREIIAKGMKPDIISFNTVIFAYCRNGRMKEASRIFAEMKDFGLAPDVITYNTFIA 754

Query: 579 LWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNL 634
            +       +A +  + M++   +PN  T NSL+  F ++ +  +A   +  + NL
Sbjct: 755 SYASDSMFIEAIDVVKYMIKNECKPNQNTYNSLIDWFCKLNRRDEANSFISNLRNL 810



 Score =  107 bits (268), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 55/290 (18%), Positives = 136/290 (46%)

Query: 359 DEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVF 418
           D  T+ T++ + G+      ++ +  +M R G  P   T+N LI +Y R  + ++A+ ++
Sbjct: 465 DIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERDTFNTLISAYSRCGFFDQAMAIY 524

Query: 419 KQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKA 478
           ++M   G  PD  TY  ++   A+ G  + +  +  +M+     P+  TY  +++     
Sbjct: 525 RRMLDAGVTPDLSTYNAVLAALARGGLWEQSEKVLAEMKDGRCKPNELTYCSLLHAYANG 584

Query: 479 GHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTY 538
             ++    L  E+ +    P  V    ++ + +K+       + + +++  GF PD  T 
Sbjct: 585 KEVERMSALAEEIYSGIIEPQAVLLKTLVLVYSKSDLLTETERAFLELREQGFSPDITTL 644

Query: 539 SIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQ 598
           + ++ + G    + +   +   ++   + P    Y  L+ ++ +  +  K+ +    ++ 
Sbjct: 645 NAMVSIYGRRRMVSKTNEILNFIKDSGFTPSLTTYNSLMYMYSRTEHFEKSEDILREIIA 704

Query: 599 AGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
            G++P++ + N+++ A+ R G++ +A  +   M + GL P + TY   ++
Sbjct: 705 KGMKPDIISFNTVIFAYCRNGRMKEASRIFAEMKDFGLAPDVITYNTFIA 754



 Score = 59.7 bits (143), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 62/273 (22%), Positives = 110/273 (40%), Gaps = 48/273 (17%)

Query: 469 SVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQN 528
           +VII+ LGK G    A  L  ++ N G   ++  Y  +I   A    Y+ A+ +++ ++ 
Sbjct: 189 AVIISVLGKEGRASFAASLLHDLRNDGVHIDIYAYTSLITAYASNGRYREAVMVFKKLEE 248

Query: 529 AGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRK 588
            G  P  +TY++++                             VYG +   W K   +  
Sbjct: 249 EGCRPTLITYNVILN----------------------------VYGKMGMPWSKIAGL-- 278

Query: 589 AWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
                ++M  +G+ P++ T N+L+S+  R     +A  + + M   G  P   TY  LL 
Sbjct: 279 ----VDSMKSSGVAPDLYTYNTLISSCRRGSLYEEAAEVFEEMKAAGFSPDKVTYNALLD 334

Query: 649 CCTEARSPYD-MGFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRE 707
              ++R P + M    E+ A    P+ +   S+ S        RD  G   E M  + + 
Sbjct: 335 VYGKSRRPREAMEVLKEMEASGFAPSIVTYNSLIS-----AYARD--GLLDEAMELKSQM 387

Query: 708 SKRGLVDAVVDF------LHKSGLKEEAGSVWE 734
            K+G+   V  +        K+G  + A  V+E
Sbjct: 388 VKKGIKPDVFTYTTLLSGFEKTGKDDYAMKVFE 420


>gi|449438627|ref|XP_004137089.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g02860-like [Cucumis sativus]
          Length = 831

 Score =  180 bits (456), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 94/296 (31%), Positives = 158/296 (53%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           + +G   D +TY T++    R   +    ++ ++M   G  P+ VTYN L+  YG++   
Sbjct: 283 KSSGVAPDLYTYNTLISSCRRGSLYEEAAEVFEEMKAAGFSPDKVTYNALLDVYGKSRRP 342

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
            EA++V K+M+  G  P  VTY +LI  +A+ G LD AM++  +M   G+ PD FTY+ +
Sbjct: 343 REAMEVLKEMEASGFAPSIVTYNSLISAYARDGLLDEAMELKSQMVKKGIKPDVFTYTTL 402

Query: 472 INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF 531
           ++   K G    A ++F EM   GC PN+ T+N +I +     N+   +K++ +++    
Sbjct: 403 LSGFEKTGKDDYAMKVFEEMRVAGCQPNICTFNALIKMHGNRGNFVEMMKVFEEIKICEC 462

Query: 532 EPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWE 591
            PD VT++ ++ V G  G   E   VF EM+R  +VP+   +  L+  + + G   +A  
Sbjct: 463 VPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERDTFNTLISAYSRCGFFDQAMA 522

Query: 592 WYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
            Y  ML AG+ P++ T N++L+A  R G    +  +L  M +   KP+  TY  LL
Sbjct: 523 IYRRMLDAGVTPDLSTYNAVLAALARGGLWEQSEKVLAEMKDGRCKPNELTYCSLL 578



 Score =  148 bits (374), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 81/304 (26%), Positives = 155/304 (50%), Gaps = 1/304 (0%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           R AG + +  T+  ++ + G    F  + K+ +++    C P++VT+N L+  +G+    
Sbjct: 423 RVAGCQPNICTFNALIKMHGNRGNFVEMMKVFEEIKICECVPDIVTWNTLLAVFGQNGMD 482

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
           +E   VFK+M+  G  P+R T+ TLI  +++ GF D AM +Y++M  AG++PD  TY+ +
Sbjct: 483 SEVSGVFKEMKRAGFVPERDTFNTLISAYSRCGFFDQAMAIYRRMLDAGVTPDLSTYNAV 542

Query: 472 INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF 531
           +  L + G  + + ++  EM +  C PN +TY  ++   A  +  +    L  ++ +   
Sbjct: 543 LAALARGGLWEQSEKVLAEMKDGRCKPNELTYCSLLHAYANGKEVERMSALAEEIYSGII 602

Query: 532 EPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWE 591
           EP  V    ++ V      L E E  F E+R + + PD      +V ++G+   V K  E
Sbjct: 603 EPQAVLLKTLVLVYSKSDLLTETERAFLELREQGFSPDITTLNAMVSIYGRRRMVSKTNE 662

Query: 592 WYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTY-TLLLSCC 650
               +  +G  P++ T NSL+  + R      +  +L+ ++  G+KP + ++ T++ + C
Sbjct: 663 ILNFIKDSGFTPSLTTYNSLMYMYSRTEHFEKSEDILREIIAKGMKPDIISFNTVIFAYC 722

Query: 651 TEAR 654
              R
Sbjct: 723 RNGR 726



 Score =  147 bits (370), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 80/268 (29%), Positives = 142/268 (52%), Gaps = 8/268 (2%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           + AGF  D+ TY  ++ + G++R+     ++L +M   G  P++VTYN LI +Y R   L
Sbjct: 318 KAAGFSPDKVTYNALLDVYGKSRRPREAMEVLKEMEASGFAPSIVTYNSLISAYARDGLL 377

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
           +EA+++  QM   G +PD  TY TL+    K G  D AM ++++M+ AG  P+  T++ +
Sbjct: 378 DEAMELKSQMVKKGIKPDVFTYTTLLSGFEKTGKDDYAMKVFEEMRVAGCQPNICTFNAL 437

Query: 472 INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF 531
           I   G  G+     ++F E+    C+P++VT+N ++A+  +         ++++M+ AGF
Sbjct: 438 IKMHGNRGNFVEMMKVFEEIKICECVPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGF 497

Query: 532 EPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWE 591
            P++ T++ ++     CG+ D+A A++  M      PD   Y  ++    + G     WE
Sbjct: 498 VPERDTFNTLISAYSRCGFFDQAMAIYRRMLDAGVTPDLSTYNAVLAALARGG----LWE 553

Query: 592 WYEAML----QAGLRPNVPTCNSLLSAF 615
             E +L        +PN  T  SLL A+
Sbjct: 554 QSEKVLAEMKDGRCKPNELTYCSLLHAY 581



 Score =  139 bits (350), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 92/357 (25%), Positives = 174/357 (48%), Gaps = 13/357 (3%)

Query: 300 SVSRILRQWKWGPLAEEALGNTNYSMDA--YQANQVLKQL---QDHTVALGFFNWLRRQA 354
           S+  IL Q     L E +    N++ D+  +    ++K L   + + +AL  F ++R + 
Sbjct: 123 SLDEILLQ-----LFETSSDGLNFTSDSVSFDILGIIKGLVFYKKNELALCVFYFVRNRE 177

Query: 355 GFKH--DEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
            F           ++ +LG+  +      LL  +  DG   ++  Y  LI +Y       
Sbjct: 178 DFASILSNSVVAVIISVLGKEGRASFAASLLHDLRNDGVHIDIYAYTSLITAYASNGRYR 237

Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGF-LDVAMDMYKKMQAAGLSPDTFTYSVI 471
           EA+ VFK+++  GC P  +TY  +++++ K G        +   M+++G++PD +TY+ +
Sbjct: 238 EAVMVFKKLEEEGCRPTLITYNVILNVYGKMGMPWSKIAGLVDSMKSSGVAPDLYTYNTL 297

Query: 472 INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF 531
           I+   +    + A ++F EM   G  P+ VTYN ++ +  K+R  + A+++ ++M+ +GF
Sbjct: 298 ISSCRRGSLYEEAAEVFEEMKAAGFSPDKVTYNALLDVYGKSRRPREAMEVLKEMEASGF 357

Query: 532 EPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWE 591
            P  VTY+ ++      G LDEA  + ++M +K   PD   Y  L+  + K G    A +
Sbjct: 358 APSIVTYNSLISAYARDGLLDEAMELKSQMVKKGIKPDVFTYTTLLSGFEKTGKDDYAMK 417

Query: 592 WYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
            +E M  AG +PN+ T N+L+      G   +   + + +      P + T+  LL+
Sbjct: 418 VFEEMRVAGCQPNICTFNALIKMHGNRGNFVEMMKVFEEIKICECVPDIVTWNTLLA 474



 Score =  120 bits (300), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 66/303 (21%), Positives = 146/303 (48%), Gaps = 1/303 (0%)

Query: 345 GFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHS 404
           G F  ++R AGF  +  T+ T++    R   F     +  +M+  G  P++ TYN ++ +
Sbjct: 487 GVFKEMKR-AGFVPERDTFNTLISAYSRCGFFDQAMAIYRRMLDAGVTPDLSTYNAVLAA 545

Query: 405 YGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPD 464
             R     ++  V  +M+   C+P+ +TYC+L+  +A    ++    + +++ +  + P 
Sbjct: 546 LARGGLWEQSEKVLAEMKDGRCKPNELTYCSLLHAYANGKEVERMSALAEEIYSGIIEPQ 605

Query: 465 TFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYR 524
                 ++    K+  L    + F E+  QG  P++ T N M+++  + R      ++  
Sbjct: 606 AVLLKTLVLVYSKSDLLTETERAFLELREQGFSPDITTLNAMVSIYGRRRMVSKTNEILN 665

Query: 525 DMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAG 584
            ++++GF P   TY+ +M +     + +++E +  E+  K   PD   +  ++  + + G
Sbjct: 666 FIKDSGFTPSLTTYNSLMYMYSRTEHFEKSEDILREIIAKGMKPDIISFNTVIFAYCRNG 725

Query: 585 NVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYT 644
            +++A   +  M   GL P+V T N+ ++++       +A  +++ M+  G KP+  TY 
Sbjct: 726 RMKEASRIFAEMKDFGLAPDVITYNTFIASYASDSMFIEAIDVVKYMIKNGCKPNQNTYN 785

Query: 645 LLL 647
            L+
Sbjct: 786 SLI 788



 Score =  117 bits (293), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 70/296 (23%), Positives = 142/296 (47%), Gaps = 6/296 (2%)

Query: 345 GFFNW----LRR--QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTY 398
           GFF+      RR   AG   D  TY  ++  L R   +    K+L +M    C+PN +TY
Sbjct: 515 GFFDQAMAIYRRMLDAGVTPDLSTYNAVLAALARGGLWEQSEKVLAEMKDGRCKPNELTY 574

Query: 399 NRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQA 458
             L+H+Y     +     + +++     EP  V   TL+ +++K+  L      + +++ 
Sbjct: 575 CSLLHAYANGKEVERMSALAEEIYSGIIEPQAVLLKTLVLVYSKSDLLTETERAFLELRE 634

Query: 459 AGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQS 518
            G SPD  T + +++  G+   +   +++   + + G  P+L TYN ++ + ++  +++ 
Sbjct: 635 QGFSPDITTLNAMVSIYGRRRMVSKTNEILNFIKDSGFTPSLTTYNSLMYMYSRTEHFEK 694

Query: 519 ALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVD 578
           +  + R++   G +PD ++++ V+      G + EA  +FAEM+     PD   Y   + 
Sbjct: 695 SEDILREIIAKGMKPDIISFNTVIFAYCRNGRMKEASRIFAEMKDFGLAPDVITYNTFIA 754

Query: 579 LWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNL 634
            +       +A +  + M++ G +PN  T NSL+  F ++ +  +A   +  + NL
Sbjct: 755 SYASDSMFIEAIDVVKYMIKNGCKPNQNTYNSLIDWFCKLNRRDEASSFISNLRNL 810



 Score = 59.7 bits (143), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 62/273 (22%), Positives = 110/273 (40%), Gaps = 48/273 (17%)

Query: 469 SVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQN 528
           +VII+ LGK G    A  L  ++ N G   ++  Y  +I   A    Y+ A+ +++ ++ 
Sbjct: 189 AVIISVLGKEGRASFAASLLHDLRNDGVHIDIYAYTSLITAYASNGRYREAVMVFKKLEE 248

Query: 529 AGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRK 588
            G  P  +TY++++                             VYG +   W K   +  
Sbjct: 249 EGCRPTLITYNVILN----------------------------VYGKMGMPWSKIAGL-- 278

Query: 589 AWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
                ++M  +G+ P++ T N+L+S+  R     +A  + + M   G  P   TY  LL 
Sbjct: 279 ----VDSMKSSGVAPDLYTYNTLISSCRRGSLYEEAAEVFEEMKAAGFSPDKVTYNALLD 334

Query: 649 CCTEARSPYD-MGFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRE 707
              ++R P + M    E+ A    P+ +   S+ S        RD  G   E M  + + 
Sbjct: 335 VYGKSRRPREAMEVLKEMEASGFAPSIVTYNSLIS-----AYARD--GLLDEAMELKSQM 387

Query: 708 SKRGLVDAVVDF------LHKSGLKEEAGSVWE 734
            K+G+   V  +        K+G  + A  V+E
Sbjct: 388 VKKGIKPDVFTYTTLLSGFEKTGKDDYAMKVFE 420


>gi|356540307|ref|XP_003538631.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g02860-like [Glycine max]
          Length = 804

 Score =  179 bits (455), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 93/296 (31%), Positives = 159/296 (53%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           R  G   D +TY T++    R   +     L  QM  +G  P+ VTYN L+  +G++   
Sbjct: 256 RSRGVAPDLYTYNTLISCCRRGSLYEEAVHLFQQMKLEGFTPDKVTYNALLDVFGKSRRP 315

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
            EA+ V ++M+  G  P  VTY +LI  +AK G L+ A+D+  +M   G+ PD FTY+ +
Sbjct: 316 QEAMKVLQEMEANGFSPTSVTYNSLISAYAKGGLLEEALDLKTQMVHKGIKPDVFTYTTL 375

Query: 472 INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF 531
           ++   KAG    A Q+F EM   GC PN+ T+N +I +      +   +K++ D++    
Sbjct: 376 LSGFEKAGKDDFAIQVFLEMRAVGCKPNICTFNALIKMHGNRGKFAEMMKVFDDIKLCNC 435

Query: 532 EPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWE 591
            PD VT++ ++ V G  G   +   +F EM+R  +V +   +  L+  + + G+  +A  
Sbjct: 436 SPDIVTWNTLLAVFGQNGMDSQVSGIFKEMKRAGFVAERDTFNTLISAYSRCGSFDQAMA 495

Query: 592 WYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
            Y++ML+AG+ P++ T N++L+A  R G    +  +L  M +   KP+  +Y+ LL
Sbjct: 496 VYKSMLEAGVVPDLSTYNAVLAALARGGLWEQSEKVLAEMEDGRCKPNELSYSSLL 551



 Score =  139 bits (349), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 85/310 (27%), Positives = 156/310 (50%), Gaps = 3/310 (0%)

Query: 342 VALGFFNWLRRQAGFKH--DEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYN 399
           +AL  F+W+R      +         ++ ILG+A +  +   LL  +  DG   +V  Y 
Sbjct: 138 LALAVFHWVRTNNSNTNLFSSSAIPVIIKILGKAGRVSSAASLLLALQNDGVHIDVYAYT 197

Query: 400 RLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGF-LDVAMDMYKKMQA 458
            LI++Y  +    +A+++F +MQ  GC P  +TY  +++++ K G        + + M++
Sbjct: 198 CLINAYSSSGRYRDAVNLFNKMQQDGCNPTLITYNVVLNVYGKMGMPWSNVTALVEAMRS 257

Query: 459 AGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQS 518
            G++PD +TY+ +I+C  +    + A  LF +M  +G  P+ VTYN ++ +  K+R  Q 
Sbjct: 258 RGVAPDLYTYNTLISCCRRGSLYEEAVHLFQQMKLEGFTPDKVTYNALLDVFGKSRRPQE 317

Query: 519 ALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVD 578
           A+K+ ++M+  GF P  VTY+ ++      G L+EA  +  +M  K   PD   Y  L+ 
Sbjct: 318 AMKVLQEMEANGFSPTSVTYNSLISAYAKGGLLEEALDLKTQMVHKGIKPDVFTYTTLLS 377

Query: 579 LWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKP 638
            + KAG    A + +  M   G +PN+ T N+L+      G+ ++   +   +      P
Sbjct: 378 GFEKAGKDDFAIQVFLEMRAVGCKPNICTFNALIKMHGNRGKFAEMMKVFDDIKLCNCSP 437

Query: 639 SLQTYTLLLS 648
            + T+  LL+
Sbjct: 438 DIVTWNTLLA 447



 Score =  136 bits (343), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 79/304 (25%), Positives = 148/304 (48%), Gaps = 1/304 (0%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           R  G K +  T+  ++ + G   +F  + K+ D +    C P++VT+N L+  +G+    
Sbjct: 396 RAVGCKPNICTFNALIKMHGNRGKFAEMMKVFDDIKLCNCSPDIVTWNTLLAVFGQNGMD 455

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
           ++   +FK+M+  G   +R T+ TLI  +++ G  D AM +YK M  AG+ PD  TY+ +
Sbjct: 456 SQVSGIFKEMKRAGFVAERDTFNTLISAYSRCGSFDQAMAVYKSMLEAGVVPDLSTYNAV 515

Query: 472 INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF 531
           +  L + G  + + ++  EM +  C PN ++Y+ ++   A  +  +       ++ +   
Sbjct: 516 LAALARGGLWEQSEKVLAEMEDGRCKPNELSYSSLLHAYANGKEIERMNAFAEEIYSGSV 575

Query: 532 EPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWE 591
           E   V    ++ V      L E E  F E+RR+   PD      ++ ++G+   V KA E
Sbjct: 576 ETHAVLLKTLVLVNSKSDLLIETERAFLELRRRGISPDITTLNAMLSIYGRKQMVAKAHE 635

Query: 592 WYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTY-TLLLSCC 650
               M +    P++ T NSL+  + R      +  +L+ +L  G+KP   +Y T++ + C
Sbjct: 636 ILNFMHETRFTPSLTTYNSLMYMYSRSENFQKSEEILREVLEKGMKPDRISYNTVIYAYC 695

Query: 651 TEAR 654
              R
Sbjct: 696 RNGR 699



 Score =  135 bits (339), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 97/405 (23%), Positives = 171/405 (42%), Gaps = 74/405 (18%)

Query: 316 EALGNTNYSMDAYQANQVLKQLQDHTV---ALGFFNWLRRQAGFKHDEHTYTTMVGILGR 372
           EA+ +   + D Y  N ++   +  ++   A+  F  ++ + GF  D+ TY  ++ + G+
Sbjct: 253 EAMRSRGVAPDLYTYNTLISCCRRGSLYEEAVHLFQQMKLE-GFTPDKVTYNALLDVFGK 311

Query: 373 ARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALD---------------- 416
           +R+     K+L +M  +G  P  VTYN LI +Y +   L EALD                
Sbjct: 312 SRRPQEAMKVLQEMEANGFSPTSVTYNSLISAYAKGGLLEEALDLKTQMVHKGIKPDVFT 371

Query: 417 -------------------VFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQ 457
                              VF +M+ VGC+P+  T+  LI +H   G     M ++  ++
Sbjct: 372 YTTLLSGFEKAGKDDFAIQVFLEMRAVGCKPNICTFNALIKMHGNRGKFAEMMKVFDDIK 431

Query: 458 AAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQ 517
               SPD  T++ ++   G+ G       +F EM   G +    T+N +I+  ++  ++ 
Sbjct: 432 LCNCSPDIVTWNTLLAVFGQNGMDSQVSGIFKEMKRAGFVAERDTFNTLISAYSRCGSFD 491

Query: 518 SALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLV 577
            A+ +Y+ M  AG  PD  TY+ V+  L   G  +++E V AEM      P+E  Y  L+
Sbjct: 492 QAMAVYKSMLEAGVVPDLSTYNAVLAALARGGLWEQSEKVLAEMEDGRCKPNELSYSSLL 551

Query: 578 DLWGKAGNVRK----AWEWYEAMLQA-------------------------------GLR 602
             +     + +    A E Y   ++                                G+ 
Sbjct: 552 HAYANGKEIERMNAFAEEIYSGSVETHAVLLKTLVLVNSKSDLLIETERAFLELRRRGIS 611

Query: 603 PNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
           P++ T N++LS + R   ++ A+ +L  M      PSL TY  L+
Sbjct: 612 PDITTLNAMLSIYGRKQMVAKAHEILNFMHETRFTPSLTTYNSLM 656



 Score =  121 bits (303), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 69/283 (24%), Positives = 143/283 (50%), Gaps = 2/283 (0%)

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
           +AG   D  TY  ++  L R   +    K+L +M    C+PN ++Y+ L+H+Y     + 
Sbjct: 502 EAGVVPDLSTYNAVLAALARGGLWEQSEKVLAEMEDGRCKPNELSYSSLLHAYANGKEI- 560

Query: 413 EALDVFKQMQVVG-CEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
           E ++ F +    G  E   V   TL+ +++K+  L      + +++  G+SPD  T + +
Sbjct: 561 ERMNAFAEEIYSGSVETHAVLLKTLVLVNSKSDLLIETERAFLELRRRGISPDITTLNAM 620

Query: 472 INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF 531
           ++  G+   +  AH++   M      P+L TYN ++ + +++ N+Q + ++ R++   G 
Sbjct: 621 LSIYGRKQMVAKAHEILNFMHETRFTPSLTTYNSLMYMYSRSENFQKSEEILREVLEKGM 680

Query: 532 EPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWE 591
           +PD+++Y+ V+      G + EA  +F+EM+    VPD   Y   +  +       +A +
Sbjct: 681 KPDRISYNTVIYAYCRNGRMKEASRIFSEMKDSALVPDVVTYNTFIATYAADSMFAEAID 740

Query: 592 WYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNL 634
               M++ G +P+  T NS++  + ++ Q  +A   ++ + NL
Sbjct: 741 VVRYMIKQGCKPDQNTYNSIVDWYCKLDQRHEANSFVKNLSNL 783



 Score =  100 bits (250), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 57/290 (19%), Positives = 134/290 (46%)

Query: 359 DEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVF 418
           D  T+ T++ + G+      ++ +  +M R G      T+N LI +Y R    ++A+ V+
Sbjct: 438 DIVTWNTLLAVFGQNGMDSQVSGIFKEMKRAGFVAERDTFNTLISAYSRCGSFDQAMAVY 497

Query: 419 KQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKA 478
           K M   G  PD  TY  ++   A+ G  + +  +  +M+     P+  +YS +++     
Sbjct: 498 KSMLEAGVVPDLSTYNAVLAALARGGLWEQSEKVLAEMEDGRCKPNELSYSSLLHAYANG 557

Query: 479 GHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTY 538
             ++  +    E+ +     + V    ++ + +K+       + + +++  G  PD  T 
Sbjct: 558 KEIERMNAFAEEIYSGSVETHAVLLKTLVLVNSKSDLLIETERAFLELRRRGISPDITTL 617

Query: 539 SIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQ 598
           + ++ + G    + +A  +   M    + P    Y  L+ ++ ++ N +K+ E    +L+
Sbjct: 618 NAMLSIYGRKQMVAKAHEILNFMHETRFTPSLTTYNSLMYMYSRSENFQKSEEILREVLE 677

Query: 599 AGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
            G++P+  + N+++ A+ R G++ +A  +   M +  L P + TY   ++
Sbjct: 678 KGMKPDRISYNTVIYAYCRNGRMKEASRIFSEMKDSALVPDVVTYNTFIA 727



 Score = 94.0 bits (232), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 71/266 (26%), Positives = 123/266 (46%), Gaps = 40/266 (15%)

Query: 447 DVAMDMYKKMQAAGLSPDTFTYS---VIINCLGKAGHL---------------------- 481
           D+A+ ++  ++    + + F+ S   VII  LGKAG +                      
Sbjct: 137 DLALAVFHWVRTNNSNTNLFSSSAIPVIIKILGKAGRVSSAASLLLALQNDGVHIDVYAY 196

Query: 482 -------------QAAHQLFCEMVNQGCIPNLVTYNIMIALQAK-ARNYQSALKLYRDMQ 527
                        + A  LF +M   GC P L+TYN+++ +  K    + +   L   M+
Sbjct: 197 TCLINAYSSSGRYRDAVNLFNKMQQDGCNPTLITYNVVLNVYGKMGMPWSNVTALVEAMR 256

Query: 528 NAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVR 587
           + G  PD  TY+ ++         +EA  +F +M+ + + PD+  Y  L+D++GK+   +
Sbjct: 257 SRGVAPDLYTYNTLISCCRRGSLYEEAVHLFQQMKLEGFTPDKVTYNALLDVFGKSRRPQ 316

Query: 588 KAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
           +A +  + M   G  P   T NSL+SA+ + G L +A  L   M++ G+KP + TYT LL
Sbjct: 317 EAMKVLQEMEANGFSPTSVTYNSLISAYAKGGLLEEALDLKTQMVHKGIKPDVFTYTTLL 376

Query: 648 SCCTEA-RSPYDMGFCHELMAVSGHP 672
           S   +A +  + +    E+ AV   P
Sbjct: 377 SGFEKAGKDDFAIQVFLEMRAVGCKP 402



 Score = 84.7 bits (208), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 48/182 (26%), Positives = 88/182 (48%), Gaps = 1/182 (0%)

Query: 347 FNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYG 406
           F  LRR+ G   D  T   M+ I GR +     +++L+ M      P++ TYN L++ Y 
Sbjct: 602 FLELRRR-GISPDITTLNAMLSIYGRKQMVAKAHEILNFMHETRFTPSLTTYNSLMYMYS 660

Query: 407 RANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTF 466
           R+    ++ ++ +++   G +PDR++Y T+I  + + G +  A  ++ +M+ + L PD  
Sbjct: 661 RSENFQKSEEILREVLEKGMKPDRISYNTVIYAYCRNGRMKEASRIFSEMKDSALVPDVV 720

Query: 467 TYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDM 526
           TY+  I           A  +   M+ QGC P+  TYN ++    K      A    +++
Sbjct: 721 TYNTFIATYAADSMFAEAIDVVRYMIKQGCKPDQNTYNSIVDWYCKLDQRHEANSFVKNL 780

Query: 527 QN 528
            N
Sbjct: 781 SN 782



 Score = 39.7 bits (91), Expect = 6.3,   Method: Compositional matrix adjust.
 Identities = 36/149 (24%), Positives = 58/149 (38%), Gaps = 39/149 (26%)

Query: 541 VMEVLGHCGYLDEAEAVFAEMRRKNW---VPDEPVYGLLVDLWGKAGNV----------- 586
           +++ LG     D A AVF  +R  N    +       +++ + GKAG V           
Sbjct: 126 IIKALGFSNKCDLALAVFHWVRTNNSNTNLFSSSAIPVIIKILGKAGRVSSAASLLLALQ 185

Query: 587 ------------------------RKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQ-L 621
                                   R A   +  M Q G  P + T N +L+ + ++G   
Sbjct: 186 NDGVHIDVYAYTCLINAYSSSGRYRDAVNLFNKMQQDGCNPTLITYNVVLNVYGKMGMPW 245

Query: 622 SDAYHLLQGMLNLGLKPSLQTYTLLLSCC 650
           S+   L++ M + G+ P L TY  L+SCC
Sbjct: 246 SNVTALVEAMRSRGVAPDLYTYNTLISCC 274


>gi|449518511|ref|XP_004166285.1| PREDICTED: pentatricopeptide repeat-containing protein At2g31400,
           chloroplastic-like [Cucumis sativus]
          Length = 868

 Score =  179 bits (455), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 131/534 (24%), Positives = 243/534 (45%), Gaps = 43/534 (8%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           G   D  TY T++  + +  Q     +++ +M      PNVVTY+ +   Y +A  L +A
Sbjct: 323 GIDQDVFTYNTLLDAVCKGGQMDLAYEIMLEMPGKKILPNVVTYSTMADGYAKAGRLEDA 382

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
           L+++ +M+ +G   DRV+Y TL+ I+AK G  + A+ + K+M ++G+  D  TY+ +++ 
Sbjct: 383 LNLYNEMKFLGIGLDRVSYNTLLSIYAKLGRFEDALKVCKEMGSSGVKKDVVTYNALLDG 442

Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPD 534
            GK G      ++F EM      PNL+TY+ +I + +K   Y+ A++++R+ + AG + D
Sbjct: 443 YGKQGKFNEVTRVFKEMKKDRVFPNLLTYSTLIDVYSKGSLYEEAMEVFREFKQAGLKAD 502

Query: 535 KVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGK------------ 582
            V YS ++  L   G +D A  +  EM ++   P+   Y  ++D +G+            
Sbjct: 503 VVLYSELINALCKNGLVDSAVLLLDEMTKEGIRPNVVTYNSIIDAFGRSTTAEFLVDGVG 562

Query: 583 AGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFL--------------RVG--QLSDAYH 626
           A N R++      +++      +   +  +  F               R+G  ++     
Sbjct: 563 ASNERQSESPTFMLIEGVDESEINWDDGHVFKFYQQLVSEKEGPAKKERLGKEEIRSILS 622

Query: 627 LLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGFCHELMAVSGHP----AHMFLLSMPS 682
           + + M  L +KP++ T++ +L+ C+  +S  D     E + +  +     AH  L+    
Sbjct: 623 VFKKMHELEIKPNVVTFSAILNACSRCKSIEDASMLLEELRLFDNQVYGVAHGLLMGF-- 680

Query: 683 PGPDGQNVRDHVGSFLEMMHSEDRESKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVY 742
                +NV        + +   D  +     +A+ D L   G K  A  V     ++ V+
Sbjct: 681 ----SENVWIQAQYLFDEVKQMDSSTASAFYNALTDMLWHFGQKRGAQLVVLEGKRRKVW 736

Query: 743 PDAVKEKGMSYWLINLHVMSDGTAVIALSRTLAWFRKQMLISGVGPSRIDIVTGWGRRSR 802
                E   S   ++LH+MS G A   +   L      +      P  + I+TGWG+ S+
Sbjct: 737 -----ETLWSDSCLDLHLMSSGAARAMVHAWLLGIHSVVFEGHQLPKLLSILTGWGKHSK 791

Query: 803 VTGTSLVRQAVQELLHMFSFPFFTENGNSGCFVGCGEPLNKWLLQSYVDRMHLL 856
           V G   +R+A++ LL     PF     N G +V  G  +  WL +S   ++ +L
Sbjct: 792 VVGDGALRRAIEALLTSMGAPFRVAKCNIGRYVSTGSVVAAWLKESGTLKLLVL 845



 Score =  159 bits (401), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 88/297 (29%), Positives = 161/297 (54%), Gaps = 1/297 (0%)

Query: 352 RQAGFKHDEHTYTTMVGILGRAR-QFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANY 410
           + +G K +  TY  ++   G+   +F  + ++ ++M+R+G QP+ +TYN L+    R   
Sbjct: 249 KVSGLKPNLVTYNAVIDACGKGGVEFKRVVEIFEEMLRNGVQPDRITYNSLLAVCSRGGL 308

Query: 411 LNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSV 470
              A ++F +M   G + D  TY TL+D   K G +D+A ++  +M    + P+  TYS 
Sbjct: 309 WEAARNLFNEMIDRGIDQDVFTYNTLLDAVCKGGQMDLAYEIMLEMPGKKILPNVVTYST 368

Query: 471 IINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAG 530
           + +   KAG L+ A  L+ EM   G   + V+YN ++++ AK   ++ ALK+ ++M ++G
Sbjct: 369 MADGYAKAGRLEDALNLYNEMKFLGIGLDRVSYNTLLSIYAKLGRFEDALKVCKEMGSSG 428

Query: 531 FEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAW 590
            + D VTY+ +++  G  G  +E   VF EM++    P+   Y  L+D++ K     +A 
Sbjct: 429 VKKDVVTYNALLDGYGKQGKFNEVTRVFKEMKKDRVFPNLLTYSTLIDVYSKGSLYEEAM 488

Query: 591 EWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
           E +    QAGL+ +V   + L++A  + G +  A  LL  M   G++P++ TY  ++
Sbjct: 489 EVFREFKQAGLKADVVLYSELINALCKNGLVDSAVLLLDEMTKEGIRPNVVTYNSII 545



 Score = 90.5 bits (223), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 58/250 (23%), Positives = 120/250 (48%), Gaps = 32/250 (12%)

Query: 354 AGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNE 413
           +G K D  TY  ++   G+  +F  + ++  +M +D   PN++TY+ LI  Y + +   E
Sbjct: 427 SGVKKDVVTYNALLDGYGKQGKFNEVTRVFKEMKKDRVFPNLLTYSTLIDVYSKGSLYEE 486

Query: 414 ALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIIN 473
           A++VF++ +  G + D V Y  LI+   K G +D A+ +  +M   G+ P+  TY+ II+
Sbjct: 487 AMEVFREFKQAGLKADVVLYSELINALCKNGLVDSAVLLLDEMTKEGIRPNVVTYNSIID 546

Query: 474 CLGKAGHLQ-------AAHQLFCE----MVNQGCIPNLVTYN----------IMIALQAK 512
             G++   +       A+++   E    M+ +G   + + ++          ++   +  
Sbjct: 547 AFGRSTTAEFLVDGVGASNERQSESPTFMLIEGVDESEINWDDGHVFKFYQQLVSEKEGP 606

Query: 513 ARN-------YQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKN 565
           A+         +S L +++ M     +P+ VT+S ++     C  +++A  +  E+R   
Sbjct: 607 AKKERLGKEEIRSILSVFKKMHELEIKPNVVTFSAILNACSRCKSIEDASMLLEELR--- 663

Query: 566 WVPDEPVYGL 575
            + D  VYG+
Sbjct: 664 -LFDNQVYGV 672



 Score = 56.2 bits (134), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 54/244 (22%), Positives = 103/244 (42%), Gaps = 31/244 (12%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGR---A 408
           +QAG K D   Y+ ++  L +     +   LLD+M ++G +PNVVTYN +I ++GR   A
Sbjct: 495 KQAGLKADVVLYSELINALCKNGLVDSAVLLLDEMTKEGIRPNVVTYNSIIDAFGRSTTA 554

Query: 409 NYLNEALDVFKQMQ--------VVGCEPDRVT---------YCTLID------IHAKAGF 445
            +L + +    + Q        + G +   +          Y  L+          + G 
Sbjct: 555 EFLVDGVGASNERQSESPTFMLIEGVDESEINWDDGHVFKFYQQLVSEKEGPAKKERLGK 614

Query: 446 LDV--AMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTY 503
            ++   + ++KKM    + P+  T+S I+N   +   ++ A  L  E+         V +
Sbjct: 615 EEIRSILSVFKKMHELEIKPNVVTFSAILNACSRCKSIEDASMLLEELRLFDNQVYGVAH 674

Query: 504 NIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAE-MR 562
            +++        +  A  L+ +++          Y+ + ++L H G    A+ V  E  R
Sbjct: 675 GLLMGFSENV--WIQAQYLFDEVKQMDSSTASAFYNALTDMLWHFGQKRGAQLVVLEGKR 732

Query: 563 RKNW 566
           RK W
Sbjct: 733 RKVW 736



 Score = 42.4 bits (98), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 48/221 (21%), Positives = 86/221 (38%), Gaps = 19/221 (8%)

Query: 576 LVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLG 635
           ++   G+ G V  A   +E  L  G    V   ++L+SA+ + G   +A  + + M   G
Sbjct: 193 MISTLGRLGKVELAKGVFETALSEGYGNTVFAFSALISAYGKSGYFDEAIKVFESMKVSG 252

Query: 636 LKPSLQTYTLLLSCCTEARSPYD--MGFCHELMAVSGHPAHMF---LLSMPSPGPDGQNV 690
           LKP+L TY  ++  C +    +   +    E++     P  +    LL++ S G   +  
Sbjct: 253 LKPNLVTYNAVIDACGKGGVEFKRVVEIFEEMLRNGVQPDRITYNSLLAVCSRGGLWEAA 312

Query: 691 RDHVGSFLEMMHSEDRESKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAVKEKG 750
           R+     ++    +D  +   L+DAV     K G  + A  +      K + P+ V    
Sbjct: 313 RNLFNEMIDRGIDQDVFTYNTLLDAVC----KGGQMDLAYEIMLEMPGKKILPNVV---- 364

Query: 751 MSYWLINLHVMSDGTAVIALSRTLAWFRKQMLISGVGPSRI 791
                     M+DG A             +M   G+G  R+
Sbjct: 365 ------TYSTMADGYAKAGRLEDALNLYNEMKFLGIGLDRV 399


>gi|115462947|ref|NP_001055073.1| Os05g0275000 [Oryza sativa Japonica Group]
 gi|50878350|gb|AAT85125.1| unknown protein, contains pentatricopeptide (PPR) repeat, PF01535
           [Oryza sativa Japonica Group]
 gi|113578624|dbj|BAF16987.1| Os05g0275000 [Oryza sativa Japonica Group]
 gi|215695094|dbj|BAG90285.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 793

 Score =  179 bits (454), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 97/298 (32%), Positives = 154/298 (51%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           R AG + D+ T +T++   GR           + +   G  P VVTYN L+  +G+A   
Sbjct: 243 RAAGVEPDDFTASTVIAACGRDGLLDQAVAFFEDLKARGHVPCVVTYNALLQVFGKAGNY 302

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
            EAL V K+M+  GC+PD VTY  L   +A+AGF + A      M + GL P+TFTY+ +
Sbjct: 303 TEALRVLKEMEDSGCQPDAVTYNELAGTYARAGFFEEAAKCLDTMTSKGLLPNTFTYNTV 362

Query: 472 INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF 531
           +      G +  A  LF  M   G +PN+ TYN++  +  K   + + L++  +M  +G 
Sbjct: 363 MTAYANVGRVDEALALFDRMKKNGYVPNVNTYNLIFGMLGKKSRFTAMLEMLEEMSRSGC 422

Query: 532 EPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWE 591
            P++VT++ ++ V G  G  D    V   M+          Y  L+  +G+ G+   A++
Sbjct: 423 TPNRVTWNTMLAVCGKRGMEDYVTRVLNGMKSCGVELSRDTYNTLISAYGRCGSRTYAFK 482

Query: 592 WYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSC 649
            Y+ M+ +G  P + T N+LL+   R G  S A  ++  ML  G KP+ Q+Y+LLL C
Sbjct: 483 MYDEMISSGFTPCLTTYNALLNVLSRQGDWSTAQSIVSKMLKNGFKPNDQSYSLLLQC 540



 Score =  163 bits (413), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 103/346 (29%), Positives = 168/346 (48%), Gaps = 5/346 (1%)

Query: 307 QWKWGPLAEEALGNTNYSMDAYQANQVLKQLQ---DHTVALGFFNWLRRQAGFKHDEHTY 363
            W+W  LA     +   + DA     V++ L     H V     + +    G + D   Y
Sbjct: 125 HWEWA-LALLRWASDEGAADAAALEMVVRALGREGQHDVVCDLLDEMPLPPGSRLDVRAY 183

Query: 364 TTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGR-ANYLNEALDVFKQMQ 422
           TT++  L RA ++    +L  ++ R G  P +VTYN ++  YGR        + + ++M+
Sbjct: 184 TTVLHALSRAGRYERALQLFAELRRQGVVPTIVTYNVVLDVYGRMGRSWPRIVALLEEMR 243

Query: 423 VVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQ 482
             G EPD  T  T+I    + G LD A+  ++ ++A G  P   TY+ ++   GKAG+  
Sbjct: 244 AAGVEPDDFTASTVIAACGRDGLLDQAVAFFEDLKARGHVPCVVTYNALLQVFGKAGNYT 303

Query: 483 AAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVM 542
            A ++  EM + GC P+ VTYN +    A+A  ++ A K    M + G  P+  TY+ VM
Sbjct: 304 EALRVLKEMEDSGCQPDAVTYNELAGTYARAGFFEEAAKCLDTMTSKGLLPNTFTYNTVM 363

Query: 543 EVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLR 602
               + G +DEA A+F  M++  +VP+   Y L+  + GK        E  E M ++G  
Sbjct: 364 TAYANVGRVDEALALFDRMKKNGYVPNVNTYNLIFGMLGKKSRFTAMLEMLEEMSRSGCT 423

Query: 603 PNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
           PN  T N++L+   + G       +L GM + G++ S  TY  L+S
Sbjct: 424 PNRVTWNTMLAVCGKRGMEDYVTRVLNGMKSCGVELSRDTYNTLIS 469



 Score =  146 bits (369), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 87/310 (28%), Positives = 153/310 (49%), Gaps = 4/310 (1%)

Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQM-VRDGCQPNVVTYNRL 401
           AL    W   +     D      +V  LGR  Q   +  LLD+M +  G + +V  Y  +
Sbjct: 129 ALALLRWASDEGA--ADAAALEMVVRALGREGQHDVVCDLLDEMPLPPGSRLDVRAYTTV 186

Query: 402 IHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAG-FLDVAMDMYKKMQAAG 460
           +H+  RA     AL +F +++  G  P  VTY  ++D++ + G      + + ++M+AAG
Sbjct: 187 LHALSRAGRYERALQLFAELRRQGVVPTIVTYNVVLDVYGRMGRSWPRIVALLEEMRAAG 246

Query: 461 LSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSAL 520
           + PD FT S +I   G+ G L  A   F ++  +G +P +VTYN ++ +  KA NY  AL
Sbjct: 247 VEPDDFTASTVIAACGRDGLLDQAVAFFEDLKARGHVPCVVTYNALLQVFGKAGNYTEAL 306

Query: 521 KLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLW 580
           ++ ++M+++G +PD VTY+ +       G+ +EA      M  K  +P+   Y  ++  +
Sbjct: 307 RVLKEMEDSGCQPDAVTYNELAGTYARAGFFEEAAKCLDTMTSKGLLPNTFTYNTVMTAY 366

Query: 581 GKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSL 640
              G V +A   ++ M + G  PNV T N +     +  + +    +L+ M   G  P+ 
Sbjct: 367 ANVGRVDEALALFDRMKKNGYVPNVNTYNLIFGMLGKKSRFTAMLEMLEEMSRSGCTPNR 426

Query: 641 QTYTLLLSCC 650
            T+  +L+ C
Sbjct: 427 VTWNTMLAVC 436



 Score =  143 bits (361), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 83/322 (25%), Positives = 163/322 (50%), Gaps = 12/322 (3%)

Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLI 402
           AL  F+ +++  G+  + +TY  + G+LG+  +F A+ ++L++M R GC PN VT+N ++
Sbjct: 375 ALALFDRMKKN-GYVPNVNTYNLIFGMLGKKSRFTAMLEMLEEMSRSGCTPNRVTWNTML 433

Query: 403 HSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLS 462
              G+    +    V   M+  G E  R TY TLI  + + G    A  MY +M ++G +
Sbjct: 434 AVCGKRGMEDYVTRVLNGMKSCGVELSRDTYNTLISAYGRCGSRTYAFKMYDEMISSGFT 493

Query: 463 PDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKL 522
           P   TY+ ++N L + G    A  +  +M+  G  PN  +Y++++   AK  N      +
Sbjct: 494 PCLTTYNALLNVLSRQGDWSTAQSIVSKMLKNGFKPNDQSYSLLLQCYAKGGNAAGIESI 553

Query: 523 YRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGK 582
            +++      P  V    ++     C  L+  E  F E++ + + PD  ++  ++ ++ K
Sbjct: 554 EKEVYVGTIFPSWVILRTLVIANFKCRRLEGVEKAFQEVKAQGYKPDLVIFNSMLAMYAK 613

Query: 583 AGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQT 642
            G   KA E ++++ Q+GL P++ T NSL+  + +  +  +A  +L+ + +  +KP + +
Sbjct: 614 NGLYSKATEMFDSIKQSGLSPDLITYNSLMDMYAKSNESWEAEKILKQLKSSQVKPDVVS 673

Query: 643 YTLLLSCCTEARSPYDMGFCHE 664
           Y  +++           GFC +
Sbjct: 674 YNTVIN-----------GFCKQ 684



 Score =  142 bits (357), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 96/332 (28%), Positives = 154/332 (46%), Gaps = 9/332 (2%)

Query: 294 TGNVVESV-SRILRQWKWGPLAEEALGNTNYSMDAYQANQVLKQ-----LQDHTVALGFF 347
           T NVV  V  R+ R W       E +       D + A+ V+       L D  VA  FF
Sbjct: 217 TYNVVLDVYGRMGRSWPRIVALLEEMRAAGVEPDDFTASTVIAACGRDGLLDQAVA--FF 274

Query: 348 NWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGR 407
             L+ + G      TY  ++ + G+A  +    ++L +M   GCQP+ VTYN L  +Y R
Sbjct: 275 EDLKAR-GHVPCVVTYNALLQVFGKAGNYTEALRVLKEMEDSGCQPDAVTYNELAGTYAR 333

Query: 408 ANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFT 467
           A +  EA      M   G  P+  TY T++  +A  G +D A+ ++ +M+  G  P+  T
Sbjct: 334 AGFFEEAAKCLDTMTSKGLLPNTFTYNTVMTAYANVGRVDEALALFDRMKKNGYVPNVNT 393

Query: 468 YSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQ 527
           Y++I   LGK     A  ++  EM   GC PN VT+N M+A+  K        ++   M+
Sbjct: 394 YNLIFGMLGKKSRFTAMLEMLEEMSRSGCTPNRVTWNTMLAVCGKRGMEDYVTRVLNGMK 453

Query: 528 NAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVR 587
           + G E  + TY+ ++   G CG    A  ++ EM    + P    Y  L+++  + G+  
Sbjct: 454 SCGVELSRDTYNTLISAYGRCGSRTYAFKMYDEMISSGFTPCLTTYNALLNVLSRQGDWS 513

Query: 588 KAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVG 619
            A      ML+ G +PN  + + LL  + + G
Sbjct: 514 TAQSIVSKMLKNGFKPNDQSYSLLLQCYAKGG 545



 Score = 94.0 bits (232), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 61/275 (22%), Positives = 126/275 (45%)

Query: 354 AGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNE 413
           +GF     TY  ++ +L R   +     ++ +M+++G +PN  +Y+ L+  Y +      
Sbjct: 490 SGFTPCLTTYNALLNVLSRQGDWSTAQSIVSKMLKNGFKPNDQSYSLLLQCYAKGGNAAG 549

Query: 414 ALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIIN 473
              + K++ V    P  V   TL+  + K   L+     +++++A G  PD   ++ ++ 
Sbjct: 550 IESIEKEVYVGTIFPSWVILRTLVIANFKCRRLEGVEKAFQEVKAQGYKPDLVIFNSMLA 609

Query: 474 CLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEP 533
              K G    A ++F  +   G  P+L+TYN ++ + AK+     A K+ + ++++  +P
Sbjct: 610 MYAKNGLYSKATEMFDSIKQSGLSPDLITYNSLMDMYAKSNESWEAEKILKQLKSSQVKP 669

Query: 534 DKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWY 593
           D V+Y+ V+      G + EA+ + +EM      P    Y  LV  +       +A E  
Sbjct: 670 DVVSYNTVINGFCKQGLIKEAQRILSEMIADGMAPCVVTYHTLVGGYASLEMFNEAREVV 729

Query: 594 EAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLL 628
             M+   L+P   T   ++ ++ +  +  +A   L
Sbjct: 730 NYMIHHNLKPMELTYRRVVDSYCKAKRYDEAREFL 764



 Score = 92.4 bits (228), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 46/190 (24%), Positives = 100/190 (52%)

Query: 372 RARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRV 431
           + R+   + K   ++   G +P++V +N ++  Y +    ++A ++F  ++  G  PD +
Sbjct: 578 KCRRLEGVEKAFQEVKAQGYKPDLVIFNSMLAMYAKNGLYSKATEMFDSIKQSGLSPDLI 637

Query: 432 TYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEM 491
           TY +L+D++AK+     A  + K+++++ + PD  +Y+ +IN   K G ++ A ++  EM
Sbjct: 638 TYNSLMDMYAKSNESWEAEKILKQLKSSQVKPDVVSYNTVINGFCKQGLIKEAQRILSEM 697

Query: 492 VNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYL 551
           +  G  P +VTY+ ++   A    +  A ++   M +   +P ++TY  V++        
Sbjct: 698 IADGMAPCVVTYHTLVGGYASLEMFNEAREVVNYMIHHNLKPMELTYRRVVDSYCKAKRY 757

Query: 552 DEAEAVFAEM 561
           DEA    +E+
Sbjct: 758 DEAREFLSEI 767



 Score = 78.6 bits (192), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 41/177 (23%), Positives = 85/177 (48%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           +  G+K D   + +M+ +  +   +    ++ D + + G  P+++TYN L+  Y ++N  
Sbjct: 593 KAQGYKPDLVIFNSMLAMYAKNGLYSKATEMFDSIKQSGLSPDLITYNSLMDMYAKSNES 652

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
            EA  + KQ++    +PD V+Y T+I+   K G +  A  +  +M A G++P   TY  +
Sbjct: 653 WEAEKILKQLKSSQVKPDVVSYNTVINGFCKQGLIKEAQRILSEMIADGMAPCVVTYHTL 712

Query: 472 INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQN 528
           +           A ++   M++    P  +TY  ++    KA+ Y  A +   ++ +
Sbjct: 713 VGGYASLEMFNEAREVVNYMIHHNLKPMELTYRRVVDSYCKAKRYDEAREFLSEISD 769



 Score = 78.2 bits (191), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 63/259 (24%), Positives = 114/259 (44%), Gaps = 16/259 (6%)

Query: 464 DTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIP-----NLVTYNIMIALQAKARNYQS 518
           D     +++  LG+ G     H + C+++++  +P     ++  Y  ++   ++A  Y+ 
Sbjct: 143 DAAALEMVVRALGREGQ----HDVVCDLLDEMPLPPGSRLDVRAYTTVLHALSRAGRYER 198

Query: 519 ALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGY-LDEAEAVFAEMRRKNWVPDEPVYGLLV 577
           AL+L+ +++  G  P  VTY++V++V G  G       A+  EMR     PD+     ++
Sbjct: 199 ALQLFAELRRQGVVPTIVTYNVVLDVYGRMGRSWPRIVALLEEMRAAGVEPDDFTASTVI 258

Query: 578 DLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLK 637
              G+ G + +A  ++E +   G  P V T N+LL  F + G  ++A  +L+ M + G +
Sbjct: 259 AACGRDGLLDQAVAFFEDLKARGHVPCVVTYNALLQVFGKAGNYTEALRVLKEMEDSGCQ 318

Query: 638 PSLQTYTLLLSCCTEARSPYDMGFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSF 697
           P   TY  L      A    +   C + M   G   + F  +             +VG  
Sbjct: 319 PDAVTYNELAGTYARAGFFEEAAKCLDTMTSKGLLPNTFTYNTV------MTAYANVGRV 372

Query: 698 LEMMHSEDRESKRGLVDAV 716
            E +   DR  K G V  V
Sbjct: 373 DEALALFDRMKKNGYVPNV 391


>gi|449436409|ref|XP_004135985.1| PREDICTED: pentatricopeptide repeat-containing protein At2g31400,
           chloroplastic-like [Cucumis sativus]
          Length = 868

 Score =  179 bits (454), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 135/535 (25%), Positives = 245/535 (45%), Gaps = 45/535 (8%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           G   D  TY T++  + +  Q     +++ +M      PNVVTY+ +   Y +A  L +A
Sbjct: 323 GIDQDVFTYNTLLDAVCKGGQMDLAYEIMLEMPGKKILPNVVTYSTMADGYAKAGRLEDA 382

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
           L+++ +M+ +G   DRV+Y TL+ I+AK G  + A+ + K+M ++G+  D  TY+ +++ 
Sbjct: 383 LNLYNEMKFLGIGLDRVSYNTLLSIYAKLGRFEDALKVCKEMGSSGVKKDVVTYNALLDG 442

Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPD 534
            GK G      ++F EM      PNL+TY+ +I + +K   Y+ A++++R+ + AG + D
Sbjct: 443 YGKQGKFNEVTRVFKEMKKDRVFPNLLTYSTLIDVYSKGSLYEEAMEVFREFKQAGLKAD 502

Query: 535 KVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGK------------ 582
            V YS ++  L   G +D A  +  EM ++   P+   Y  ++D +G+            
Sbjct: 503 VVLYSELINALCKNGLVDSAVLLLDEMTKEGIRPNVVTYNSIIDAFGRSTTAEFLVDGVG 562

Query: 583 AGNVRKAWEWYEAMLQAGL-RPNVPTCNSLLSAFL--------------RVG--QLSDAY 625
           A N R++ E    ML  G+    +   +  +  F               R+G  ++    
Sbjct: 563 ASNERQS-ESPSFMLIEGVDESEINWDDGHVFKFYQQLVSEKEGPAKKERLGKEEIRSIL 621

Query: 626 HLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGFCHELMAVSGHP----AHMFLLSMP 681
            + + M  L +KP++ T++ +L+ C+  +S  D     E + +  +     AH  L+   
Sbjct: 622 SVFKKMHELEIKPNVVTFSAILNACSRCKSIEDASMLLEELRLFDNQVYGVAHGLLMGF- 680

Query: 682 SPGPDGQNVRDHVGSFLEMMHSEDRESKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNV 741
                 +NV        + +   D  +     +A+ D L   G K  A  V     ++ V
Sbjct: 681 -----SENVWIQAQYLFDEVKQMDSSTASAFYNALTDMLWHFGQKRGAQLVVLEGKRRKV 735

Query: 742 YPDAVKEKGMSYWLINLHVMSDGTAVIALSRTLAWFRKQMLISGVGPSRIDIVTGWGRRS 801
           +     E   S   ++LH+MS G A   +   L      +      P  + I+TGWG+ S
Sbjct: 736 W-----ETLWSDSCLDLHLMSSGAARAMVHAWLLGIHSVVFEGHQLPKLLSILTGWGKHS 790

Query: 802 RVTGTSLVRQAVQELLHMFSFPFFTENGNSGCFVGCGEPLNKWLLQSYVDRMHLL 856
           +V G   +R+A++ LL     PF     N G +V  G  +  WL +S   ++ +L
Sbjct: 791 KVVGDGALRRAIEALLTSMGAPFRVAKCNIGRYVSTGSVVAAWLKESGTLKLLVL 845



 Score =  159 bits (401), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 88/297 (29%), Positives = 161/297 (54%), Gaps = 1/297 (0%)

Query: 352 RQAGFKHDEHTYTTMVGILGRAR-QFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANY 410
           + +G K +  TY  ++   G+   +F  + ++ ++M+R+G QP+ +TYN L+    R   
Sbjct: 249 KVSGLKPNLVTYNAVIDACGKGGVEFKRVVEIFEEMLRNGVQPDRITYNSLLAVCSRGGL 308

Query: 411 LNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSV 470
              A ++F +M   G + D  TY TL+D   K G +D+A ++  +M    + P+  TYS 
Sbjct: 309 WEAARNLFNEMIDRGIDQDVFTYNTLLDAVCKGGQMDLAYEIMLEMPGKKILPNVVTYST 368

Query: 471 IINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAG 530
           + +   KAG L+ A  L+ EM   G   + V+YN ++++ AK   ++ ALK+ ++M ++G
Sbjct: 369 MADGYAKAGRLEDALNLYNEMKFLGIGLDRVSYNTLLSIYAKLGRFEDALKVCKEMGSSG 428

Query: 531 FEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAW 590
            + D VTY+ +++  G  G  +E   VF EM++    P+   Y  L+D++ K     +A 
Sbjct: 429 VKKDVVTYNALLDGYGKQGKFNEVTRVFKEMKKDRVFPNLLTYSTLIDVYSKGSLYEEAM 488

Query: 591 EWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
           E +    QAGL+ +V   + L++A  + G +  A  LL  M   G++P++ TY  ++
Sbjct: 489 EVFREFKQAGLKADVVLYSELINALCKNGLVDSAVLLLDEMTKEGIRPNVVTYNSII 545



 Score = 90.5 bits (223), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 58/250 (23%), Positives = 120/250 (48%), Gaps = 32/250 (12%)

Query: 354 AGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNE 413
           +G K D  TY  ++   G+  +F  + ++  +M +D   PN++TY+ LI  Y + +   E
Sbjct: 427 SGVKKDVVTYNALLDGYGKQGKFNEVTRVFKEMKKDRVFPNLLTYSTLIDVYSKGSLYEE 486

Query: 414 ALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIIN 473
           A++VF++ +  G + D V Y  LI+   K G +D A+ +  +M   G+ P+  TY+ II+
Sbjct: 487 AMEVFREFKQAGLKADVVLYSELINALCKNGLVDSAVLLLDEMTKEGIRPNVVTYNSIID 546

Query: 474 CLGKAGHLQ-------AAHQLFCE----MVNQGCIPNLVTYN----------IMIALQAK 512
             G++   +       A+++   E    M+ +G   + + ++          ++   +  
Sbjct: 547 AFGRSTTAEFLVDGVGASNERQSESPSFMLIEGVDESEINWDDGHVFKFYQQLVSEKEGP 606

Query: 513 ARN-------YQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKN 565
           A+         +S L +++ M     +P+ VT+S ++     C  +++A  +  E+R   
Sbjct: 607 AKKERLGKEEIRSILSVFKKMHELEIKPNVVTFSAILNACSRCKSIEDASMLLEELR--- 663

Query: 566 WVPDEPVYGL 575
            + D  VYG+
Sbjct: 664 -LFDNQVYGV 672



 Score = 56.2 bits (134), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 54/244 (22%), Positives = 103/244 (42%), Gaps = 31/244 (12%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGR---A 408
           +QAG K D   Y+ ++  L +     +   LLD+M ++G +PNVVTYN +I ++GR   A
Sbjct: 495 KQAGLKADVVLYSELINALCKNGLVDSAVLLLDEMTKEGIRPNVVTYNSIIDAFGRSTTA 554

Query: 409 NYLNEALDVFKQMQ--------VVGCEPDRVT---------YCTLID------IHAKAGF 445
            +L + +    + Q        + G +   +          Y  L+          + G 
Sbjct: 555 EFLVDGVGASNERQSESPSFMLIEGVDESEINWDDGHVFKFYQQLVSEKEGPAKKERLGK 614

Query: 446 LDV--AMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTY 503
            ++   + ++KKM    + P+  T+S I+N   +   ++ A  L  E+         V +
Sbjct: 615 EEIRSILSVFKKMHELEIKPNVVTFSAILNACSRCKSIEDASMLLEELRLFDNQVYGVAH 674

Query: 504 NIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAE-MR 562
            +++        +  A  L+ +++          Y+ + ++L H G    A+ V  E  R
Sbjct: 675 GLLMGFSENV--WIQAQYLFDEVKQMDSSTASAFYNALTDMLWHFGQKRGAQLVVLEGKR 732

Query: 563 RKNW 566
           RK W
Sbjct: 733 RKVW 736



 Score = 42.4 bits (98), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 48/221 (21%), Positives = 86/221 (38%), Gaps = 19/221 (8%)

Query: 576 LVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLG 635
           ++   G+ G V  A   +E  L  G    V   ++L+SA+ + G   +A  + + M   G
Sbjct: 193 MISTLGRLGKVELAKGVFETALSEGYGNTVFAFSALISAYGKSGYFDEAIKVFESMKVSG 252

Query: 636 LKPSLQTYTLLLSCCTEARSPYD--MGFCHELMAVSGHPAHMF---LLSMPSPGPDGQNV 690
           LKP+L TY  ++  C +    +   +    E++     P  +    LL++ S G   +  
Sbjct: 253 LKPNLVTYNAVIDACGKGGVEFKRVVEIFEEMLRNGVQPDRITYNSLLAVCSRGGLWEAA 312

Query: 691 RDHVGSFLEMMHSEDRESKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAVKEKG 750
           R+     ++    +D  +   L+DAV     K G  + A  +      K + P+ V    
Sbjct: 313 RNLFNEMIDRGIDQDVFTYNTLLDAVC----KGGQMDLAYEIMLEMPGKKILPNVV---- 364

Query: 751 MSYWLINLHVMSDGTAVIALSRTLAWFRKQMLISGVGPSRI 791
                     M+DG A             +M   G+G  R+
Sbjct: 365 ------TYSTMADGYAKAGRLEDALNLYNEMKFLGIGLDRV 399


>gi|357466003|ref|XP_003603286.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355492334|gb|AES73537.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 1246

 Score =  179 bits (454), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 109/349 (31%), Positives = 172/349 (49%), Gaps = 11/349 (3%)

Query: 311 GPLAEEALGNTNYSMDAYQANQVLKQLQDHTVALGFFNWLRR------QAGFKHDEHTYT 364
            P A   +    + ++AY  N ++     H +  GF N   +        G K    TY+
Sbjct: 185 APFALRKMTEVGFILNAYSYNGLI-----HLLLPGFCNEALKVYKRMISEGMKPSMKTYS 239

Query: 365 TMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVV 424
            ++  LGR      I  LL++M   G +PN+ TY   I + GRA  +++A  +FK+M   
Sbjct: 240 ALMVALGRRGDTRKIMNLLEEMKSIGLRPNIYTYTICIRALGRARRIDDAWGIFKEMDDE 299

Query: 425 GCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAA 484
           GC PD +TY  LID    AG LD A ++Y KM+A+  SPD  TY  +++  GK G L+  
Sbjct: 300 GCGPDVITYTVLIDALCAAGKLDKAKELYVKMRASSHSPDRVTYITLMDKFGKVGDLETV 359

Query: 485 HQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEV 544
            + + EM   G  P++VTY I+I    K+ +   A  +   M   G  P+  TY+ ++  
Sbjct: 360 KRFWNEMEVDGYAPDVVTYTILIEALCKSGDVDRAFDMLDVMTTKGIFPNLHTYNTMICG 419

Query: 545 LGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPN 604
           L     LDEA  +   M      P    Y L +D +GK+G+  KA + +E M + G+ P+
Sbjct: 420 LLKARRLDEALELLENMESLGVKPTAFSYVLFIDYYGKSGDPAKAIDTFETMKKRGIMPS 479

Query: 605 VPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEA 653
           +  CN+ L      G++S+A  +   +   GL P   TY +L+ C ++A
Sbjct: 480 IAACNASLYTLAETGRISEAEDIFNDLHKCGLSPDSVTYNMLMKCYSKA 528



 Score =  172 bits (437), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 97/332 (29%), Positives = 162/332 (48%), Gaps = 35/332 (10%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           +  G + + +TYT  +  LGRAR+      +  +M  +GC P+V+TY  LI +   A  L
Sbjct: 262 KSIGLRPNIYTYTICIRALGRARRIDDAWGIFKEMDDEGCGPDVITYTVLIDALCAAGKL 321

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
           ++A +++ +M+     PDRVTY TL+D   K G L+     + +M+  G +PD  TY+++
Sbjct: 322 DKAKELYVKMRASSHSPDRVTYITLMDKFGKVGDLETVKRFWNEMEVDGYAPDVVTYTIL 381

Query: 472 INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF 531
           I  L K+G +  A  +   M  +G  PNL TYN MI    KAR    AL+L  +M++ G 
Sbjct: 382 IEALCKSGDVDRAFDMLDVMTTKGIFPNLHTYNTMICGLLKARRLDEALELLENMESLGV 441

Query: 532 EPDKVTYSIVME-----------------------------------VLGHCGYLDEAEA 556
           +P   +Y + ++                                    L   G + EAE 
Sbjct: 442 KPTAFSYVLFIDYYGKSGDPAKAIDTFETMKKRGIMPSIAACNASLYTLAETGRISEAED 501

Query: 557 VFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFL 616
           +F ++ +    PD   Y +L+  + KAG + KA +    M+  G  P+V   NSL++   
Sbjct: 502 IFNDLHKCGLSPDSVTYNMLMKCYSKAGQIDKATQLLSEMISKGCEPDVMIINSLINTLY 561

Query: 617 RVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
           + G++  A+ +   + NL L P++ TY +LL+
Sbjct: 562 KAGRVDAAWKMFGRLKNLKLAPTVVTYNILLT 593



 Score =  166 bits (421), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 90/295 (30%), Positives = 161/295 (54%)

Query: 352  RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
            + AG   +  TY  ++   G++++   +  L  +M   GC+PN +T+N +I +  ++N L
Sbjct: 823  KSAGTHPNNFTYNLLLDAHGKSKRINKLYDLYSEMRSRGCEPNAITHNIIISALVKSNNL 882

Query: 412  NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
            N+ALD++ ++      P   TY  LID   KAG  + AM ++++M   G  P++  Y+++
Sbjct: 883  NKALDLYYELMSGDFSPTPCTYGPLIDGLLKAGRSEQAMKIFEEMLDYGCGPNSVIYNIL 942

Query: 472  INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF 531
            IN  GK+G +  A +LF +MV +G  P+L +Y I++           A++ + +++  G 
Sbjct: 943  INGFGKSGEIDFACELFKKMVKEGIRPDLKSYTILVECLCITGRIDEAVQYFEELKLTGL 1002

Query: 532  EPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWE 591
            +PD V+Y+ ++  LG    LDEA ++F+EM+ +   PD   Y  L+   G AG V  A +
Sbjct: 1003 DPDTVSYNFIINGLGKSRRLDEALSLFSEMKNRGISPDLYTYNALILHLGIAGKVDVAVK 1062

Query: 592  WYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLL 646
             YE +   GL P+V T N+L+      G    A+ + + M+ +G  P+ +T+  L
Sbjct: 1063 MYEELQLVGLEPSVFTYNALIRGHSLSGNKDQAFSVFKKMMVVGCSPNTETFAQL 1117



 Score =  159 bits (402), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 91/301 (30%), Positives = 161/301 (53%), Gaps = 2/301 (0%)

Query: 347 FNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYG 406
           F+ ++++  ++ +  TY T+   L      G     L +M   G   N  +YN LIH   
Sbjct: 154 FDLMQKKVIYR-NLTTYMTIFKALSIKGGIGRAPFALRKMTEVGFILNAYSYNGLIHLL- 211

Query: 407 RANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTF 466
              + NEAL V+K+M   G +P   TY  L+    + G     M++ ++M++ GL P+ +
Sbjct: 212 LPGFCNEALKVYKRMISEGMKPSMKTYSALMVALGRRGDTRKIMNLLEEMKSIGLRPNIY 271

Query: 467 TYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDM 526
           TY++ I  LG+A  +  A  +F EM ++GC P+++TY ++I     A     A +LY  M
Sbjct: 272 TYTICIRALGRARRIDDAWGIFKEMDDEGCGPDVITYTVLIDALCAAGKLDKAKELYVKM 331

Query: 527 QNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNV 586
           + +   PD+VTY  +M+  G  G L+  +  + EM    + PD   Y +L++   K+G+V
Sbjct: 332 RASSHSPDRVTYITLMDKFGKVGDLETVKRFWNEMEVDGYAPDVVTYTILIEALCKSGDV 391

Query: 587 RKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLL 646
            +A++  + M   G+ PN+ T N+++   L+  +L +A  LL+ M +LG+KP+  +Y L 
Sbjct: 392 DRAFDMLDVMTTKGIFPNLHTYNTMICGLLKARRLDEALELLENMESLGVKPTAFSYVLF 451

Query: 647 L 647
           +
Sbjct: 452 I 452



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 91/302 (30%), Positives = 162/302 (53%), Gaps = 2/302 (0%)

Query: 347  FNWLRRQAGFKHDEHTYTTMV-GILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSY 405
            F+   +  G      +Y  ++ G+LG      A+ +L + M   G  PN  TYN L+ ++
Sbjct: 783  FDKFTKNLGIHPTLESYNCLMDGLLGSNFTEKAL-ELFEDMKSAGTHPNNFTYNLLLDAH 841

Query: 406  GRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDT 465
            G++  +N+  D++ +M+  GCEP+ +T+  +I    K+  L+ A+D+Y ++ +   SP  
Sbjct: 842  GKSKRINKLYDLYSEMRSRGCEPNAITHNIIISALVKSNNLNKALDLYYELMSGDFSPTP 901

Query: 466  FTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRD 525
             TY  +I+ L KAG  + A ++F EM++ GC PN V YNI+I    K+     A +L++ 
Sbjct: 902  CTYGPLIDGLLKAGRSEQAMKIFEEMLDYGCGPNSVIYNILINGFGKSGEIDFACELFKK 961

Query: 526  MQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGN 585
            M   G  PD  +Y+I++E L   G +DEA   F E++     PD   Y  +++  GK+  
Sbjct: 962  MVKEGIRPDLKSYTILVECLCITGRIDEAVQYFEELKLTGLDPDTVSYNFIINGLGKSRR 1021

Query: 586  VRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTL 645
            + +A   +  M   G+ P++ T N+L+      G++  A  + + +  +GL+PS+ TY  
Sbjct: 1022 LDEALSLFSEMKNRGISPDLYTYNALILHLGIAGKVDVAVKMYEELQLVGLEPSVFTYNA 1081

Query: 646  LL 647
            L+
Sbjct: 1082 LI 1083



 Score =  146 bits (368), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 87/301 (28%), Positives = 146/301 (48%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           R +    D  TY T++   G+      + +  ++M  DG  P+VVTY  LI +  ++  +
Sbjct: 332 RASSHSPDRVTYITLMDKFGKVGDLETVKRFWNEMEVDGYAPDVVTYTILIEALCKSGDV 391

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
           + A D+   M   G  P+  TY T+I    KA  LD A+++ + M++ G+ P  F+Y + 
Sbjct: 392 DRAFDMLDVMTTKGIFPNLHTYNTMICGLLKARRLDEALELLENMESLGVKPTAFSYVLF 451

Query: 472 INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF 531
           I+  GK+G    A   F  M  +G +P++   N  +   A+      A  ++ D+   G 
Sbjct: 452 IDYYGKSGDPAKAIDTFETMKKRGIMPSIAACNASLYTLAETGRISEAEDIFNDLHKCGL 511

Query: 532 EPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWE 591
            PD VTY+++M+     G +D+A  + +EM  K   PD  +   L++   KAG V  AW+
Sbjct: 512 SPDSVTYNMLMKCYSKAGQIDKATQLLSEMISKGCEPDVMIINSLINTLYKAGRVDAAWK 571

Query: 592 WYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCT 651
            +  +    L P V T N LL+   + G++  A  L   M   G  P+  T+  LL C +
Sbjct: 572 MFGRLKNLKLAPTVVTYNILLTGLGKEGKILKALELFGSMTESGCPPNTITFNSLLDCLS 631

Query: 652 E 652
           +
Sbjct: 632 K 632



 Score =  145 bits (365), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 101/391 (25%), Positives = 178/391 (45%), Gaps = 2/391 (0%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           G+  D  TYT ++  L ++        +LD M   G  PN+ TYN +I    +A  L+EA
Sbjct: 370 GYAPDVVTYTILIEALCKSGDVDRAFDMLDVMTTKGIFPNLHTYNTMICGLLKARRLDEA 429

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
           L++ + M+ +G +P   +Y   ID + K+G    A+D ++ M+  G+ P     +  +  
Sbjct: 430 LELLENMESLGVKPTAFSYVLFIDYYGKSGDPAKAIDTFETMKKRGIMPSIAACNASLYT 489

Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPD 534
           L + G +  A  +F ++   G  P+ VTYN+++   +KA     A +L  +M + G EPD
Sbjct: 490 LAETGRISEAEDIFNDLHKCGLSPDSVTYNMLMKCYSKAGQIDKATQLLSEMISKGCEPD 549

Query: 535 KVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYE 594
            +  + ++  L   G +D A  +F  ++     P    Y +L+   GK G + KA E + 
Sbjct: 550 VMIINSLINTLYKAGRVDAAWKMFGRLKNLKLAPTVVTYNILLTGLGKEGKILKALELFG 609

Query: 595 AMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTY-TLLLSCCTEA 653
           +M ++G  PN  T NSLL    +   +  A  +   M  +   P + TY T++     E 
Sbjct: 610 SMTESGCPPNTITFNSLLDCLSKNDAVDLALKMFCRMTMMNCNPDVLTYNTIIYGLIREG 669

Query: 654 RSPYDMGFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRESKRGLV 713
           R  Y   F H+ M     P ++ L ++         V D +   +E +H    ++     
Sbjct: 670 RIDYAFWFFHQ-MKKFLSPDYVTLCTLIPGVVRHGRVEDAIKVVMEFVHQACLQTNSQFW 728

Query: 714 DAVVDFLHKSGLKEEAGSVWEVAAQKNVYPD 744
             +++ +      EEA S  E+    +V  D
Sbjct: 729 GELMECILTEAEIEEAISFAEILVCNSVCQD 759



 Score =  143 bits (360), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 79/291 (27%), Positives = 154/291 (52%), Gaps = 1/291 (0%)

Query: 358  HDEHTYTTMVGILGRARQFGAINKLLDQMVRD-GCQPNVVTYNRLIHSYGRANYLNEALD 416
             D+H    ++ +L + ++      + D+  ++ G  P + +YN L+     +N+  +AL+
Sbjct: 758  QDDHVMLPLIKVLCKRKKALDAQNVFDKFTKNLGIHPTLESYNCLMDGLLGSNFTEKALE 817

Query: 417  VFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLG 476
            +F+ M+  G  P+  TY  L+D H K+  ++   D+Y +M++ G  P+  T+++II+ L 
Sbjct: 818  LFEDMKSAGTHPNNFTYNLLLDAHGKSKRINKLYDLYSEMRSRGCEPNAITHNIIISALV 877

Query: 477  KAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKV 536
            K+ +L  A  L+ E+++    P   TY  +I    KA   + A+K++ +M + G  P+ V
Sbjct: 878  KSNNLNKALDLYYELMSGDFSPTPCTYGPLIDGLLKAGRSEQAMKIFEEMLDYGCGPNSV 937

Query: 537  TYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAM 596
             Y+I++   G  G +D A  +F +M ++   PD   Y +LV+     G + +A +++E +
Sbjct: 938  IYNILINGFGKSGEIDFACELFKKMVKEGIRPDLKSYTILVECLCITGRIDEAVQYFEEL 997

Query: 597  LQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
               GL P+  + N +++   +  +L +A  L   M N G+ P L TY  L+
Sbjct: 998  KLTGLDPDTVSYNFIINGLGKSRRLDEALSLFSEMKNRGISPDLYTYNALI 1048



 Score =  132 bits (331), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 77/230 (33%), Positives = 126/230 (54%), Gaps = 2/230 (0%)

Query: 362  TYTTMV-GILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQ 420
            TY  ++ G+L   R   A+ K+ ++M+  GC PN V YN LI+ +G++  ++ A ++FK+
Sbjct: 903  TYGPLIDGLLKAGRSEQAM-KIFEEMLDYGCGPNSVIYNILINGFGKSGEIDFACELFKK 961

Query: 421  MQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGH 480
            M   G  PD  +Y  L++     G +D A+  +++++  GL PDT +Y+ IIN LGK+  
Sbjct: 962  MVKEGIRPDLKSYTILVECLCITGRIDEAVQYFEELKLTGLDPDTVSYNFIINGLGKSRR 1021

Query: 481  LQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSI 540
            L  A  LF EM N+G  P+L TYN +I     A     A+K+Y ++Q  G EP   TY+ 
Sbjct: 1022 LDEALSLFSEMKNRGISPDLYTYNALILHLGIAGKVDVAVKMYEELQLVGLEPSVFTYNA 1081

Query: 541  VMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAW 590
            ++      G  D+A +VF +M      P+   +  L + + +AG V   +
Sbjct: 1082 LIRGHSLSGNKDQAFSVFKKMMVVGCSPNTETFAQLPNKYPRAGLVHNPF 1131



 Score =  130 bits (328), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 67/243 (27%), Positives = 136/243 (55%), Gaps = 1/243 (0%)

Query: 413  EALDVF-KQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
            +A +VF K  + +G  P   +Y  L+D    + F + A+++++ M++AG  P+ FTY+++
Sbjct: 778  DAQNVFDKFTKNLGIHPTLESYNCLMDGLLGSNFTEKALELFEDMKSAGTHPNNFTYNLL 837

Query: 472  INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF 531
            ++  GK+  +   + L+ EM ++GC PN +T+NI+I+   K+ N   AL LY ++ +  F
Sbjct: 838  LDAHGKSKRINKLYDLYSEMRSRGCEPNAITHNIIISALVKSNNLNKALDLYYELMSGDF 897

Query: 532  EPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWE 591
             P   TY  +++ L   G  ++A  +F EM      P+  +Y +L++ +GK+G +  A E
Sbjct: 898  SPTPCTYGPLIDGLLKAGRSEQAMKIFEEMLDYGCGPNSVIYNILINGFGKSGEIDFACE 957

Query: 592  WYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCT 651
             ++ M++ G+RP++ +   L+      G++ +A    + +   GL P   +Y  +++   
Sbjct: 958  LFKKMVKEGIRPDLKSYTILVECLCITGRIDEAVQYFEELKLTGLDPDTVSYNFIINGLG 1017

Query: 652  EAR 654
            ++R
Sbjct: 1018 KSR 1020



 Score =  112 bits (280), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 87/335 (25%), Positives = 160/335 (47%), Gaps = 9/335 (2%)

Query: 343  ALGFFNWLRRQAGFKHDEHTYTTMV-GILGRARQFGAINKLLDQMVRDGC-QPNVVTYNR 400
            A  FF+ +++      D  T  T++ G++   R   AI K++ + V   C Q N   +  
Sbjct: 674  AFWFFHQMKK--FLSPDYVTLCTLIPGVVRHGRVEDAI-KVVMEFVHQACLQTNSQFWGE 730

Query: 401  LIHSYGRANYLNEALDVFKQMQVVG--CEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQA 458
            L+        + EA+  F ++ V    C+ D V    +  +  +   LD      K  + 
Sbjct: 731  LMECILTEAEIEEAIS-FAEILVCNSVCQDDHVMLPLIKVLCKRKKALDAQNVFDKFTKN 789

Query: 459  AGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQS 518
             G+ P   +Y+ +++ L  +   + A +LF +M + G  PN  TYN+++    K++    
Sbjct: 790  LGIHPTLESYNCLMDGLLGSNFTEKALELFEDMKSAGTHPNNFTYNLLLDAHGKSKRINK 849

Query: 519  ALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVD 578
               LY +M++ G EP+ +T++I++  L     L++A  ++ E+   ++ P    YG L+D
Sbjct: 850  LYDLYSEMRSRGCEPNAITHNIIISALVKSNNLNKALDLYYELMSGDFSPTPCTYGPLID 909

Query: 579  LWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKP 638
               KAG   +A + +E ML  G  PN    N L++ F + G++  A  L + M+  G++P
Sbjct: 910  GLLKAGRSEQAMKIFEEMLDYGCGPNSVIYNILINGFGKSGEIDFACELFKKMVKEGIRP 969

Query: 639  SLQTYTLLLSC-CTEARSPYDMGFCHELMAVSGHP 672
             L++YT+L+ C C   R    + +  EL      P
Sbjct: 970  DLKSYTILVECLCITGRIDEAVQYFEELKLTGLDP 1004



 Score =  104 bits (260), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 72/303 (23%), Positives = 144/303 (47%), Gaps = 4/303 (1%)

Query: 347 FNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYG 406
           FN L +  G   D  TY  ++    +A Q     +LL +M+  GC+P+V+  N LI++  
Sbjct: 503 FNDLHK-CGLSPDSVTYNMLMKCYSKAGQIDKATQLLSEMISKGCEPDVMIINSLINTLY 561

Query: 407 RANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTF 466
           +A  ++ A  +F +++ +   P  VTY  L+    K G +  A++++  M  +G  P+T 
Sbjct: 562 KAGRVDAAWKMFGRLKNLKLAPTVVTYNILLTGLGKEGKILKALELFGSMTESGCPPNTI 621

Query: 467 TYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDM 526
           T++ +++CL K   +  A ++FC M    C P+++TYN +I    +      A   +  M
Sbjct: 622 TFNSLLDCLSKNDAVDLALKMFCRMTMMNCNPDVLTYNTIIYGLIREGRIDYAFWFFHQM 681

Query: 527 QNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWV-PDEPVYGLLVDLWGKAGN 585
           +     PD VT   ++  +   G +++A  V  E   +  +  +   +G L++       
Sbjct: 682 KKF-LSPDYVTLCTLIPGVVRHGRVEDAIKVVMEFVHQACLQTNSQFWGELMECILTEAE 740

Query: 586 VRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGML-NLGLKPSLQTYT 644
           + +A  + E ++   +  +      L+    +  +  DA ++      NLG+ P+L++Y 
Sbjct: 741 IEEAISFAEILVCNSVCQDDHVMLPLIKVLCKRKKALDAQNVFDKFTKNLGIHPTLESYN 800

Query: 645 LLL 647
            L+
Sbjct: 801 CLM 803


>gi|302758218|ref|XP_002962532.1| hypothetical protein SELMODRAFT_404389 [Selaginella moellendorffii]
 gi|300169393|gb|EFJ35995.1| hypothetical protein SELMODRAFT_404389 [Selaginella moellendorffii]
          Length = 1031

 Score =  179 bits (454), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 112/340 (32%), Positives = 170/340 (50%), Gaps = 10/340 (2%)

Query: 312 PLAEEALGNTNYSMDAYQANQVLKQLQDHTVALGFFNWLRRQA--GFKHDEHTYTTMVGI 369
           P   E + +  Y+ D+Y  + V+K L         F  L +    GFK +   YT +   
Sbjct: 145 PAMFERMLDAGYAPDSYTYHLVIKSLCQMNQIDKAFTMLDKAKVRGFKPEVSVYTIL--- 201

Query: 370 LGRARQFGAINKLLD--QMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCE 427
               R F    +L D  ++ R+   P+ + YN +IH + R N  + AL+  K+M      
Sbjct: 202 ---TRAFCKTGRLKDALEIFRNIPSPDAIAYNAIIHGHCRKNDCDGALEFLKEMNERKVA 258

Query: 428 PDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQL 487
           PD  TY  LID   KA   D A +M  +M   G++PDT T++ I++ L KAG  + AH L
Sbjct: 259 PDVFTYNILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGKFERAHSL 318

Query: 488 FCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGH 547
              M  + C P+  TYN +I+   K +N   A  L  +  ++GF PD VTYSI+ + L  
Sbjct: 319 LAVMAERNCRPSCCTYNTLISGLCKQQNVDRAKDLVDEFVSSGFVPDVVTYSILADGLCK 378

Query: 548 CGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPT 607
            G +DEA  +  EM  K   P+   Y  L+D   KA    KA+E  E+++ +G  P+V T
Sbjct: 379 RGRIDEAFELVKEMSGKGCTPNLVTYNTLIDGLCKASKTEKAYELLESLVSSGFVPDVVT 438

Query: 608 CNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
              ++    + G+L  A  +++GML  G  PS+ TYT L+
Sbjct: 439 YTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALM 478



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 116/449 (25%), Positives = 199/449 (44%), Gaps = 18/449 (4%)

Query: 359 DEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVF 418
           D  TY  ++  L +A +    +++L +MV  G  P+ VT+N ++    +A     A  + 
Sbjct: 260 DVFTYNILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGKFERAHSLL 319

Query: 419 KQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKA 478
             M    C P   TY TLI    K   +D A D+  +  ++G  PD  TYS++ + L K 
Sbjct: 320 AVMAERNCRPSCCTYNTLISGLCKQQNVDRAKDLVDEFVSSGFVPDVVTYSILADGLCKR 379

Query: 479 GHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTY 538
           G +  A +L  EM  +GC PNLVTYN +I    KA   + A +L   + ++GF PD VTY
Sbjct: 380 GRIDEAFELVKEMSGKGCTPNLVTYNTLIDGLCKASKTEKAYELLESLVSSGFVPDVVTY 439

Query: 539 SIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQ 598
           +I+++ L   G LD+A  +   M ++   P    Y  L++   + G V +A   ++ M+ 
Sbjct: 440 TIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAHHIFKEMVS 499

Query: 599 AGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS-CCTEARSPY 657
                +     SL++ + +  +  +A  ++ G+      P +  Y  L+   C E R   
Sbjct: 500 KDCTADALAYVSLVNGYCKSSRTKEAQKVVDGIRG---TPYIDVYNALMDGYCKEGRLD- 555

Query: 658 DMGFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRESKRGLVDAVV 717
           ++    E MA  G   ++   ++   G       D    FLE MHS          + ++
Sbjct: 556 EIPNVFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHSAGCVPDVVSYNIII 615

Query: 718 DFLHKSGLKEEAGSVWEVAAQKNVYPDAVKEKGMSYWLINLHVMSDGTAVIALSRTLAWF 777
           D L K+   +EA  V +   Q  + PDAV    +           D   ++         
Sbjct: 616 DGLFKASKPKEARQVLDQMIQAGIPPDAVTYNTLMAQFCKEERFDDAVGIL--------- 666

Query: 778 RKQMLISGVGPSRI---DIVTGWGRRSRV 803
            K M+ +GV P  +    +++G  + +R+
Sbjct: 667 -KNMIKAGVDPDNVTYNTLISGLSQTNRL 694



 Score =  149 bits (377), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 105/383 (27%), Positives = 184/383 (48%), Gaps = 16/383 (4%)

Query: 354 AGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNE 413
           +GF  D  TY+ +   L +  +     +L+ +M   GC PN+VTYN LI    +A+   +
Sbjct: 360 SGFVPDVVTYSILADGLCKRGRIDEAFELVKEMSGKGCTPNLVTYNTLIDGLCKASKTEK 419

Query: 414 ALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIIN 473
           A ++ + +   G  PD VTY  ++D   K G LD A+ M + M   G +P   TY+ ++ 
Sbjct: 420 AYELLESLVSSGFVPDVVTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALME 479

Query: 474 CLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEP 533
            L + G +  AH +F EMV++ C  + + Y  ++    K+   + A K+   ++     P
Sbjct: 480 GLCRTGRVDEAHHIFKEMVSKDCTADALAYVSLVNGYCKSSRTKEAQKVVDGIRGT---P 536

Query: 534 DKVTYSIVMEVLGHC--GYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWE 591
               Y+ +M+  G+C  G LDE   VF +M  +  VP+   Y +++D   K G V +A+ 
Sbjct: 537 YIDVYNALMD--GYCKEGRLDEIPNVFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFP 594

Query: 592 WYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTY-TLLLSCC 650
           + E+M  AG  P+V + N ++    +  +  +A  +L  M+  G+ P   TY TL+   C
Sbjct: 595 FLESMHSAGCVPDVVSYNIIIDGLFKASKPKEARQVLDQMIQAGIPPDAVTYNTLMAQFC 654

Query: 651 TEARSPYDMGFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRE--- 707
            E R    +G    ++     P ++   ++ S    G +  + +G   E+MH   R    
Sbjct: 655 KEERFDDAVGILKNMIKAGVDPDNVTYNTLIS----GLSQTNRLGDAYELMHEMLRNGCV 710

Query: 708 -SKRGLVDAVVDFLHKSGLKEEA 729
            S     + ++D L K G  ++A
Sbjct: 711 VSACTTYNTIIDRLCKEGCLKQA 733



 Score =  129 bits (324), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 85/289 (29%), Positives = 139/289 (48%), Gaps = 5/289 (1%)

Query: 385 QMVRDGCQ--PNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAK 442
           Q V DG +  P +  YN L+  Y +   L+E  +VF+ M   GC P+  TY  ++D   K
Sbjct: 526 QKVVDGIRGTPYIDVYNALMDGYCKEGRLDEIPNVFEDMACRGCVPNIKTYNIVMDGLCK 585

Query: 443 AGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVT 502
            G +D A    + M +AG  PD  +Y++II+ L KA   + A Q+  +M+  G  P+ VT
Sbjct: 586 HGKVDEAFPFLESMHSAGCVPDVVSYNIIIDGLFKASKPKEARQVLDQMIQAGIPPDAVT 645

Query: 503 YNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMR 562
           YN ++A   K   +  A+ + ++M  AG +PD VTY+ ++  L     L +A  +  EM 
Sbjct: 646 YNTLMAQFCKEERFDDAVGILKNMIKAGVDPDNVTYNTLISGLSQTNRLGDAYELMHEML 705

Query: 563 RKNWVPDE-PVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQL 621
           R   V      Y  ++D   K G +++A    + M   G+  N  T N  +    + G+L
Sbjct: 706 RNGCVVSACTTYNTIIDRLCKEGCLKQALLLMDHMTGHGVEANTVTYNIFIDRLCKEGRL 765

Query: 622 SDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGFCHELMAVSG 670
            +A  LL  M    L+  +   T+++  C   +         E++AV G
Sbjct: 766 DEASSLLSEMDT--LRDEVSYTTVIIGLCKAEQLDRASKLAREMVAVKG 812



 Score =  124 bits (312), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 93/320 (29%), Positives = 146/320 (45%), Gaps = 34/320 (10%)

Query: 362 TYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQM 421
           TY  ++  L +  +       L+ M   GC P+VV+YN +I    +A+   EA  V  QM
Sbjct: 575 TYNIVMDGLCKHGKVDEAFPFLESMHSAGCVPDVVSYNIIIDGLFKASKPKEARQVLDQM 634

Query: 422 QVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHL 481
              G  PD VTY TL+    K    D A+ + K M  AG+ PD  TY+ +I+ L +   L
Sbjct: 635 IQAGIPPDAVTYNTLMAQFCKEERFDDAVGILKNMIKAGVDPDNVTYNTLISGLSQTNRL 694

Query: 482 QAAHQLFCEMVNQGCIPN-LVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSI 540
             A++L  EM+  GC+ +   TYN +I    K    + AL L   M   G E + VTY+I
Sbjct: 695 GDAYELMHEMLRNGCVVSACTTYNTIIDRLCKEGCLKQALLLMDHMTGHGVEANTVTYNI 754

Query: 541 VMEVLGHCGYLDEAEAVFAEMR----------------------RKNWVPDEPV------ 572
            ++ L   G LDEA ++ +EM                       R + +  E V      
Sbjct: 755 FIDRLCKEGRLDEASSLLSEMDTLRDEVSYTTVIIGLCKAEQLDRASKLAREMVAVKGLC 814

Query: 573 -----YGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHL 627
                + LL+D + K   + +A      M+Q G  P+V T N +++   ++ ++  A+ L
Sbjct: 815 ITSHTFNLLIDAFTKTKRLDEALTLLGLMVQRGCSPSVITYNMVITCLCKLDKVDKAWEL 874

Query: 628 LQGMLNLGLKPSLQTYTLLL 647
              M   G+  S  +YT+L+
Sbjct: 875 FDEMAVRGIVASSVSYTVLI 894



 Score =  109 bits (273), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 79/281 (28%), Positives = 127/281 (45%), Gaps = 5/281 (1%)

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
           QAG   D  TY T++    +  +F     +L  M++ G  P+ VTYN LI    + N L 
Sbjct: 636 QAGIPPDAVTYNTLMAQFCKEERFDDAVGILKNMIKAGVDPDNVTYNTLISGLSQTNRLG 695

Query: 413 EALDVFKQMQVVGCEPDR-VTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
           +A ++  +M   GC      TY T+ID   K G L  A+ +   M   G+  +T TY++ 
Sbjct: 696 DAYELMHEMLRNGCVVSACTTYNTIIDRLCKEGCLKQALLLMDHMTGHGVEANTVTYNIF 755

Query: 472 INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNA-G 530
           I+ L K G L  A  L  EM     + + V+Y  +I    KA     A KL R+M    G
Sbjct: 756 IDRLCKEGRLDEASSLLSEMDT---LRDEVSYTTVIIGLCKAEQLDRASKLAREMVAVKG 812

Query: 531 FEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAW 590
                 T++++++       LDEA  +   M ++   P    Y +++    K   V KAW
Sbjct: 813 LCITSHTFNLLIDAFTKTKRLDEALTLLGLMVQRGCSPSVITYNMVITCLCKLDKVDKAW 872

Query: 591 EWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGM 631
           E ++ M   G+  +  +   L+      G+  +A  +L+ M
Sbjct: 873 ELFDEMAVRGIVASSVSYTVLIYGLCGQGRGKEALQVLEEM 913



 Score = 99.8 bits (247), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 88/358 (24%), Positives = 150/358 (41%), Gaps = 23/358 (6%)

Query: 452 MYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQA 511
           M+++M  AG +PD++TY ++I  L +   +  A  +  +   +G  P +  Y I+     
Sbjct: 147 MFERMLDAGYAPDSYTYHLVIKSLCQMNQIDKAFTMLDKAKVRGFKPEVSVYTILTRAFC 206

Query: 512 KARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHC--GYLDEAEAVFAEMRRKNWVPD 569
           K    + AL+++R++ +    PD + Y+ ++   GHC     D A     EM  +   PD
Sbjct: 207 KTGRLKDALEIFRNIPS----PDAIAYNAIIH--GHCRKNDCDGALEFLKEMNERKVAPD 260

Query: 570 EPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQ 629
              Y +L+D   KA    KA E    M+  G+ P+  T NS++    + G+   A+ LL 
Sbjct: 261 VFTYNILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGKFERAHSLLA 320

Query: 630 GMLNLGLKPSLQTYTLLLS-CCTEARSPYDMGFCHELMAVSGHPAHMFLLSMPSPGPDGQ 688
            M     +PS  TY  L+S  C +           E ++ SG    +   S+ + G   +
Sbjct: 321 VMAERNCRPSCCTYNTLISGLCKQQNVDRAKDLVDEFVS-SGFVPDVVTYSILADGLCKR 379

Query: 689 NVRDHVGSFLEMMHSEDRESKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAVKE 748
              D     ++ M  +         + ++D L K+   E+A  + E        PD V  
Sbjct: 380 GRIDEAFELVKEMSGKGCTPNLVTYNTLIDGLCKASKTEKAYELLESLVSSGFVPDVV-- 437

Query: 749 KGMSYWLINLHVMSDGTAVIALSRTLAWFRKQMLISGVGPSRID---IVTGWGRRSRV 803
              +Y +I   +  +G    AL        + ML  G  PS I    ++ G  R  RV
Sbjct: 438 ---TYTIIVDGLCKEGRLDKALKMV-----EGMLKRGCTPSVITYTALMEGLCRTGRV 487



 Score = 67.8 bits (164), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 55/214 (25%), Positives = 93/214 (43%), Gaps = 35/214 (16%)

Query: 362 TYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQM 421
           TY T++  L +         L+D M   G + N VTYN  I    +   L+EA  +  +M
Sbjct: 716 TYNTIIDRLCKEGCLKQALLLMDHMTGHGVEANTVTYNIFIDRLCKEGRLDEASSLLSEM 775

Query: 422 Q-----------VVG-CEPDRV---------------------TYCTLIDIHAKAGFLDV 448
                       ++G C+ +++                     T+  LID   K   LD 
Sbjct: 776 DTLRDEVSYTTVIIGLCKAEQLDRASKLAREMVAVKGLCITSHTFNLLIDAFTKTKRLDE 835

Query: 449 AMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMI- 507
           A+ +   M   G SP   TY+++I CL K   +  A +LF EM  +G + + V+Y ++I 
Sbjct: 836 ALTLLGLMVQRGCSPSVITYNMVITCLCKLDKVDKAWELFDEMAVRGIVASSVSYTVLIY 895

Query: 508 ALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIV 541
            L  + R  + AL++  +M ++  E D + +  V
Sbjct: 896 GLCGQGRG-KEALQVLEEMASSDCEIDDLKWEDV 928



 Score = 65.9 bits (159), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 43/139 (30%), Positives = 70/139 (50%), Gaps = 1/139 (0%)

Query: 359 DEHTYTTMVGILGRARQFGAINKLLDQMVR-DGCQPNVVTYNRLIHSYGRANYLNEALDV 417
           DE +YTT++  L +A Q    +KL  +MV   G      T+N LI ++ +   L+EAL +
Sbjct: 780 DEVSYTTVIIGLCKAEQLDRASKLAREMVAVKGLCITSHTFNLLIDAFTKTKRLDEALTL 839

Query: 418 FKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGK 477
              M   GC P  +TY  +I    K   +D A +++ +M   G+   + +Y+V+I  L  
Sbjct: 840 LGLMVQRGCSPSVITYNMVITCLCKLDKVDKAWELFDEMAVRGIVASSVSYTVLIYGLCG 899

Query: 478 AGHLQAAHQLFCEMVNQGC 496
            G  + A Q+  EM +  C
Sbjct: 900 QGRGKEALQVLEEMASSDC 918



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 48/232 (20%), Positives = 92/232 (39%), Gaps = 4/232 (1%)

Query: 512 KARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEP 571
           + ++ Q+A+  +    + GF+    T +  ++ L   G  D   A+F  M    + PD  
Sbjct: 102 RLKDPQTAIVFFVWAGDRGFKHSTFTRNCFLQTLLENGSSDRIPAMFERMLDAGYAPDSY 161

Query: 572 VYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGM 631
            Y L++    +   + KA+   +     G +P V     L  AF + G+L DA  + +  
Sbjct: 162 TYHLVIKSLCQMNQIDKAFTMLDKAKVRGFKPEVSVYTILTRAFCKTGRLKDALEIFR-- 219

Query: 632 LNLGLKPSLQTYTLLLSCCTEARSPYDMGFCHELMAVSGHPAHMFLLSMPSPGPDGQNVR 691
            N+    ++    ++   C +      + F  E+      P  +F  ++   G    +  
Sbjct: 220 -NIPSPDAIAYNAIIHGHCRKNDCDGALEFLKEMNERKVAP-DVFTYNILIDGLCKASKT 277

Query: 692 DHVGSFLEMMHSEDRESKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYP 743
           D     L  M            ++++D L K+G  E A S+  V A++N  P
Sbjct: 278 DKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGKFERAHSLLAVMAERNCRP 329


>gi|125551633|gb|EAY97342.1| hypothetical protein OsI_19265 [Oryza sativa Indica Group]
          Length = 793

 Score =  179 bits (454), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 97/298 (32%), Positives = 154/298 (51%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           R AG + D+ T +T++   GR           + +   G  P VVTYN L+  +G+A   
Sbjct: 243 RAAGVEPDDFTASTVIAACGRDGLLDQAVAFFEDLKARGHVPCVVTYNALLQVFGKAGNY 302

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
            EAL V K+M+  GC+PD VTY  L   +A+AGF + A      M + GL P+TFTY+ +
Sbjct: 303 TEALRVLKEMEDSGCQPDAVTYNELAGTYARAGFFEEAAKCLDTMTSKGLLPNTFTYNTV 362

Query: 472 INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF 531
           +      G +  A  LF  M   G +PN+ TYN++  +  K   + + L++  +M  +G 
Sbjct: 363 MTAYANVGRVDEALALFDRMKKNGYVPNVNTYNLIFGMLGKKSRFTAMLEMLEEMSRSGC 422

Query: 532 EPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWE 591
            P++VT++ ++ V G  G  D    V   M+          Y  L+  +G+ G+   A++
Sbjct: 423 TPNRVTWNTMLAVCGKRGMEDYVTRVLNGMKSCGVELSRDTYNTLISAYGRCGSRTYAFK 482

Query: 592 WYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSC 649
            Y+ M+ +G  P + T N+LL+   R G  S A  ++  ML  G KP+ Q+Y+LLL C
Sbjct: 483 MYDEMISSGFTPCLTTYNALLNVLSRQGDWSTAQSIVSKMLKNGFKPNDQSYSLLLQC 540



 Score =  163 bits (413), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 103/346 (29%), Positives = 168/346 (48%), Gaps = 5/346 (1%)

Query: 307 QWKWGPLAEEALGNTNYSMDAYQANQVLKQLQ---DHTVALGFFNWLRRQAGFKHDEHTY 363
            W+W  LA     +   + DA     V++ L     H V     + +    G + D   Y
Sbjct: 125 HWEWA-LALLRWASDEGAADAAALEMVVRALGREGQHDVVCDLLDEMPLPPGSRLDVRAY 183

Query: 364 TTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGR-ANYLNEALDVFKQMQ 422
           TT++  L RA ++    +L  ++ R G  P +VTYN ++  YGR        + + ++M+
Sbjct: 184 TTVLHALSRAGRYERALQLFAELRRQGVVPTIVTYNVVLDVYGRMGRSWPRIVALLEEMR 243

Query: 423 VVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQ 482
             G EPD  T  T+I    + G LD A+  ++ ++A G  P   TY+ ++   GKAG+  
Sbjct: 244 AAGVEPDDFTASTVIAACGRDGLLDQAVAFFEDLKARGHVPCVVTYNALLQVFGKAGNYT 303

Query: 483 AAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVM 542
            A ++  EM + GC P+ VTYN +    A+A  ++ A K    M + G  P+  TY+ VM
Sbjct: 304 EALRVLKEMEDSGCQPDAVTYNELAGTYARAGFFEEAAKCLDTMTSKGLLPNTFTYNTVM 363

Query: 543 EVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLR 602
               + G +DEA A+F  M++  +VP+   Y L+  + GK        E  E M ++G  
Sbjct: 364 TAYANVGRVDEALALFDRMKKNGYVPNVNTYNLIFGMLGKKSRFTAMLEMLEEMSRSGCT 423

Query: 603 PNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
           PN  T N++L+   + G       +L GM + G++ S  TY  L+S
Sbjct: 424 PNRVTWNTMLAVCGKRGMEDYVTRVLNGMKSCGVELSRDTYNTLIS 469



 Score =  146 bits (368), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 87/310 (28%), Positives = 153/310 (49%), Gaps = 4/310 (1%)

Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQM-VRDGCQPNVVTYNRL 401
           AL    W   +     D      +V  LGR  Q   +  LLD+M +  G + +V  Y  +
Sbjct: 129 ALALLRWASDEGA--ADAAALEMVVRALGREGQHDVVCDLLDEMPLPPGSRLDVRAYTTV 186

Query: 402 IHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAG-FLDVAMDMYKKMQAAG 460
           +H+  RA     AL +F +++  G  P  VTY  ++D++ + G      + + ++M+AAG
Sbjct: 187 LHALSRAGRYERALQLFAELRRQGVVPTIVTYNVVLDVYGRMGRSWPRIVALLEEMRAAG 246

Query: 461 LSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSAL 520
           + PD FT S +I   G+ G L  A   F ++  +G +P +VTYN ++ +  KA NY  AL
Sbjct: 247 VEPDDFTASTVIAACGRDGLLDQAVAFFEDLKARGHVPCVVTYNALLQVFGKAGNYTEAL 306

Query: 521 KLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLW 580
           ++ ++M+++G +PD VTY+ +       G+ +EA      M  K  +P+   Y  ++  +
Sbjct: 307 RVLKEMEDSGCQPDAVTYNELAGTYARAGFFEEAAKCLDTMTSKGLLPNTFTYNTVMTAY 366

Query: 581 GKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSL 640
              G V +A   ++ M + G  PNV T N +     +  + +    +L+ M   G  P+ 
Sbjct: 367 ANVGRVDEALALFDRMKKNGYVPNVNTYNLIFGMLGKKSRFTAMLEMLEEMSRSGCTPNR 426

Query: 641 QTYTLLLSCC 650
            T+  +L+ C
Sbjct: 427 VTWNTMLAVC 436



 Score =  143 bits (360), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 83/322 (25%), Positives = 163/322 (50%), Gaps = 12/322 (3%)

Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLI 402
           AL  F+ +++  G+  + +TY  + G+LG+  +F A+ ++L++M R GC PN VT+N ++
Sbjct: 375 ALALFDRMKKN-GYVPNVNTYNLIFGMLGKKSRFTAMLEMLEEMSRSGCTPNRVTWNTML 433

Query: 403 HSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLS 462
              G+    +    V   M+  G E  R TY TLI  + + G    A  MY +M ++G +
Sbjct: 434 AVCGKRGMEDYVTRVLNGMKSCGVELSRDTYNTLISAYGRCGSRTYAFKMYDEMISSGFT 493

Query: 463 PDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKL 522
           P   TY+ ++N L + G    A  +  +M+  G  PN  +Y++++   AK  N      +
Sbjct: 494 PCLTTYNALLNVLSRQGDWSTAQSIVSKMLKNGFKPNDQSYSLLLQCYAKGGNAAGIESI 553

Query: 523 YRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGK 582
            +++      P  V    ++     C  L+  E  F E++ + + PD  ++  ++ ++ K
Sbjct: 554 EKEVYVGTIFPSWVILRTLVIANFKCRRLEGVEKAFQEVKAQGYKPDLVIFNSMLAMYAK 613

Query: 583 AGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQT 642
            G   KA E ++++ Q+GL P++ T NSL+  + +  +  +A  +L+ + +  +KP + +
Sbjct: 614 NGLYSKATEMFDSIKQSGLSPDLITYNSLMDMYAKSNESWEAEKILKQLKSSQVKPDVVS 673

Query: 643 YTLLLSCCTEARSPYDMGFCHE 664
           Y  +++           GFC +
Sbjct: 674 YNTVIN-----------GFCKQ 684



 Score =  142 bits (357), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 96/332 (28%), Positives = 154/332 (46%), Gaps = 9/332 (2%)

Query: 294 TGNVVESV-SRILRQWKWGPLAEEALGNTNYSMDAYQANQVLKQ-----LQDHTVALGFF 347
           T NVV  V  R+ R W       E +       D + A+ V+       L D  VA  FF
Sbjct: 217 TYNVVLDVYGRMGRSWPRIVALLEEMRAAGVEPDDFTASTVIAACGRDGLLDQAVA--FF 274

Query: 348 NWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGR 407
             L+ + G      TY  ++ + G+A  +    ++L +M   GCQP+ VTYN L  +Y R
Sbjct: 275 EDLKAR-GHVPCVVTYNALLQVFGKAGNYTEALRVLKEMEDSGCQPDAVTYNELAGTYAR 333

Query: 408 ANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFT 467
           A +  EA      M   G  P+  TY T++  +A  G +D A+ ++ +M+  G  P+  T
Sbjct: 334 AGFFEEAAKCLDTMTSKGLLPNTFTYNTVMTAYANVGRVDEALALFDRMKKNGYVPNVNT 393

Query: 468 YSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQ 527
           Y++I   LGK     A  ++  EM   GC PN VT+N M+A+  K        ++   M+
Sbjct: 394 YNLIFGMLGKKSRFTAMLEMLEEMSRSGCTPNRVTWNTMLAVCGKRGMEDYVTRVLNGMK 453

Query: 528 NAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVR 587
           + G E  + TY+ ++   G CG    A  ++ EM    + P    Y  L+++  + G+  
Sbjct: 454 SCGVELSRDTYNTLISAYGRCGSRTYAFKMYDEMISSGFTPCLTTYNALLNVLSRQGDWS 513

Query: 588 KAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVG 619
            A      ML+ G +PN  + + LL  + + G
Sbjct: 514 TAQSIVSKMLKNGFKPNDQSYSLLLQCYAKGG 545



 Score = 94.0 bits (232), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 61/275 (22%), Positives = 126/275 (45%)

Query: 354 AGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNE 413
           +GF     TY  ++ +L R   +     ++ +M+++G +PN  +Y+ L+  Y +      
Sbjct: 490 SGFTPCLTTYNALLNVLSRQGDWSTAQSIVSKMLKNGFKPNDQSYSLLLQCYAKGGNAAG 549

Query: 414 ALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIIN 473
              + K++ V    P  V   TL+  + K   L+     +++++A G  PD   ++ ++ 
Sbjct: 550 IESIEKEVYVGTIFPSWVILRTLVIANFKCRRLEGVEKAFQEVKAQGYKPDLVIFNSMLA 609

Query: 474 CLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEP 533
              K G    A ++F  +   G  P+L+TYN ++ + AK+     A K+ + ++++  +P
Sbjct: 610 MYAKNGLYSKATEMFDSIKQSGLSPDLITYNSLMDMYAKSNESWEAEKILKQLKSSQVKP 669

Query: 534 DKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWY 593
           D V+Y+ V+      G + EA+ + +EM      P    Y  LV  +       +A E  
Sbjct: 670 DVVSYNTVINGFCKQGLIKEAQRILSEMIADGMAPCVVTYHTLVGGYASLEMFNEAREVV 729

Query: 594 EAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLL 628
             M+   L+P   T   ++ ++ +  +  +A   L
Sbjct: 730 NYMIHHNLKPMELTYRRVVDSYCKAKRYDEAREFL 764



 Score = 92.4 bits (228), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 46/190 (24%), Positives = 100/190 (52%)

Query: 372 RARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRV 431
           + R+   + K   ++   G +P++V +N ++  Y +    ++A ++F  ++  G  PD +
Sbjct: 578 KCRRLEGVEKAFQEVKAQGYKPDLVIFNSMLAMYAKNGLYSKATEMFDSIKQSGLSPDLI 637

Query: 432 TYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEM 491
           TY +L+D++AK+     A  + K+++++ + PD  +Y+ +IN   K G ++ A ++  EM
Sbjct: 638 TYNSLMDMYAKSNESWEAEKILKQLKSSQVKPDVVSYNTVINGFCKQGLIKEAQRILSEM 697

Query: 492 VNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYL 551
           +  G  P +VTY+ ++   A    +  A ++   M +   +P ++TY  V++        
Sbjct: 698 IADGMAPCVVTYHTLVGGYASLEMFNEAREVVNYMIHHNLKPMELTYRRVVDSYCKAKRY 757

Query: 552 DEAEAVFAEM 561
           DEA    +E+
Sbjct: 758 DEAREFLSEI 767



 Score = 78.6 bits (192), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 41/177 (23%), Positives = 85/177 (48%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           +  G+K D   + +M+ +  +   +    ++ D + + G  P+++TYN L+  Y ++N  
Sbjct: 593 KAQGYKPDLVIFNSMLAMYAKNGLYSKATEMFDSIKQSGLSPDLITYNSLMDMYAKSNES 652

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
            EA  + KQ++    +PD V+Y T+I+   K G +  A  +  +M A G++P   TY  +
Sbjct: 653 WEAEKILKQLKSSQVKPDVVSYNTVINGFCKQGLIKEAQRILSEMIADGMAPCVVTYHTL 712

Query: 472 INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQN 528
           +           A ++   M++    P  +TY  ++    KA+ Y  A +   ++ +
Sbjct: 713 VGGYASLEMFNEAREVVNYMIHHNLKPMELTYRRVVDSYCKAKRYDEAREFLSEISD 769



 Score = 78.2 bits (191), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 63/259 (24%), Positives = 114/259 (44%), Gaps = 16/259 (6%)

Query: 464 DTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIP-----NLVTYNIMIALQAKARNYQS 518
           D     +++  LG+ G     H + C+++++  +P     ++  Y  ++   ++A  Y+ 
Sbjct: 143 DAAALEMVVRALGREGQ----HDVVCDLLDEMPLPPGSRLDVRAYTTVLHALSRAGRYER 198

Query: 519 ALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGY-LDEAEAVFAEMRRKNWVPDEPVYGLLV 577
           AL+L+ +++  G  P  VTY++V++V G  G       A+  EMR     PD+     ++
Sbjct: 199 ALQLFAELRRQGVVPTIVTYNVVLDVYGRMGRSWPRIVALLEEMRAAGVEPDDFTASTVI 258

Query: 578 DLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLK 637
              G+ G + +A  ++E +   G  P V T N+LL  F + G  ++A  +L+ M + G +
Sbjct: 259 AACGRDGLLDQAVAFFEDLKARGHVPCVVTYNALLQVFGKAGNYTEALRVLKEMEDSGCQ 318

Query: 638 PSLQTYTLLLSCCTEARSPYDMGFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSF 697
           P   TY  L      A    +   C + M   G   + F  +             +VG  
Sbjct: 319 PDAVTYNELAGTYARAGFFEEAAKCLDTMTSKGLLPNTFTYNTV------MTAYANVGRV 372

Query: 698 LEMMHSEDRESKRGLVDAV 716
            E +   DR  K G V  V
Sbjct: 373 DEALALFDRMKKNGYVPNV 391


>gi|168014206|ref|XP_001759643.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162689182|gb|EDQ75555.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 1043

 Score =  179 bits (454), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 123/432 (28%), Positives = 210/432 (48%), Gaps = 10/432 (2%)

Query: 362  TYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQM 421
            TY++++    +  Q      L D+MVR GC  +V TY+ +I+   +++ +++ALDVF +M
Sbjct: 600  TYSSLMASFYKRDQEEESLSLFDEMVRKGCVADVSTYSLVINCLCKSDDVDQALDVFGRM 659

Query: 422  QVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHL 481
            +  G EP    Y TL+    K   +D A+ ++ ++Q + L PDTF Y++++N L K+  +
Sbjct: 660  KEEGMEPLLGNYKTLLSSLVKDEKIDFALQIFNELQESSLVPDTFVYNIMVNGLVKSNRV 719

Query: 482  QAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIV 541
              A +L   M NQ  +P+L TY  ++    K+   + A  ++  M   G EPD V Y+ +
Sbjct: 720  DEACKLVDSMKNQNILPDLFTYTSLLDGLGKSGRLEEAFNMFTKMTEEGHEPDVVAYTSL 779

Query: 542  MEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGL 601
            M+VLG  G L  A  +F  M +K  VPD   Y  L+D  GK G V +A+ ++E  +  G 
Sbjct: 780  MDVLGKGGKLSHALIIFRAMAKKRCVPDVVTYSSLIDSLGKEGRVEEAYYFFENSISKGC 839

Query: 602  RPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGF 661
             PNV   +SL+ +F + G +  A  L + M      P++ TY  LLS   +A        
Sbjct: 840  TPNVGVYSSLIDSFGKKGMVDRALELFEEMQRRQCPPNIVTYNNLLSGLAKAGRLNVAEK 899

Query: 662  CHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRESKRGLVDAVVDFLH 721
              E M   G    +   ++   G     + D   S+ + M       ++G+V  V+ F  
Sbjct: 900  LLEEMEKVGCVPDLVTYNILIDGVGKMGMVDEAESYFKRM------KEKGIVPDVITF-- 951

Query: 722  KSGLKEEAGSVWEVAAQKNVYPDAVKEKGMSYWLINLHVMSDGTAVIALSRTLAWFRKQM 781
             + L E  G V ++     ++ D+++E+G +  ++  +V+ D           A    +M
Sbjct: 952  -TSLIESLGKVDKLLEACELF-DSMEEEGYNPSVVTYNVLIDILGRAGKVHEAAMIFHEM 1009

Query: 782  LISGVGPSRIDI 793
             + G  P  I I
Sbjct: 1010 KVKGCMPDGITI 1021



 Score =  178 bits (452), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 105/328 (32%), Positives = 167/328 (50%), Gaps = 1/328 (0%)

Query: 343  ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLI 402
            AL  FN L+ ++    D   Y  MV  L ++ +     KL+D M      P++ TY  L+
Sbjct: 687  ALQIFNELQ-ESSLVPDTFVYNIMVNGLVKSNRVDEACKLVDSMKNQNILPDLFTYTSLL 745

Query: 403  HSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLS 462
               G++  L EA ++F +M   G EPD V Y +L+D+  K G L  A+ +++ M      
Sbjct: 746  DGLGKSGRLEEAFNMFTKMTEEGHEPDVVAYTSLMDVLGKGGKLSHALIIFRAMAKKRCV 805

Query: 463  PDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKL 522
            PD  TYS +I+ LGK G ++ A+  F   +++GC PN+  Y+ +I    K      AL+L
Sbjct: 806  PDVVTYSSLIDSLGKEGRVEEAYYFFENSISKGCTPNVGVYSSLIDSFGKKGMVDRALEL 865

Query: 523  YRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGK 582
            + +MQ     P+ VTY+ ++  L   G L+ AE +  EM +   VPD   Y +L+D  GK
Sbjct: 866  FEEMQRRQCPPNIVTYNNLLSGLAKAGRLNVAEKLLEEMEKVGCVPDLVTYNILIDGVGK 925

Query: 583  AGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQT 642
             G V +A  +++ M + G+ P+V T  SL+ +  +V +L +A  L   M   G  PS+ T
Sbjct: 926  MGMVDEAESYFKRMKEKGIVPDVITFTSLIESLGKVDKLLEACELFDSMEEEGYNPSVVT 985

Query: 643  YTLLLSCCTEARSPYDMGFCHELMAVSG 670
            Y +L+     A   ++       M V G
Sbjct: 986  YNVLIDILGRAGKVHEAAMIFHEMKVKG 1013



 Score =  177 bits (448), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 98/350 (28%), Positives = 176/350 (50%)

Query: 298 VESVSRILRQWKWGPLAEEALGNTNYSMDAYQANQVLKQLQDHTVALGFFNWLRRQAGFK 357
           ++ ++ ++R+ KW     + L    + ++      V+   +D  +A  FF W  +Q G+ 
Sbjct: 120 LKKINGVIRRRKWDAEMGKQLERLKFKLNPGLVCDVVVNQKDLHLAKCFFTWAGQQDGYS 179

Query: 358 HDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDV 417
           H   TYT M+  L  A++  A+ ++L  M ++G + ++     L+ ++G  N ++ AL++
Sbjct: 180 HTVGTYTLMIKRLAGAQETDAVVQILTAMWKEGHRISMHLLTSLLRTFGSTNNVSGALEI 239

Query: 418 FKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGK 477
           F QM+  GC P    Y  ++++  K GF   A+ ++ K+    + PD  T+ + ++   +
Sbjct: 240 FNQMKSFGCNPSTNMYNFVLELLVKGGFYHSAVIVFGKLGQFRIQPDAQTFRIFVHSFNR 299

Query: 478 AGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVT 537
           +G L  A +   EM+  G  P + T+ ++I    K+ N   A K +  M+N    P+ VT
Sbjct: 300 SGRLDPAAEPIQEMIKSGIDPGVHTFTVLIDALVKSGNIDEACKFFNGMKNLRCSPNVVT 359

Query: 538 YSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAML 597
           Y+ ++  L   G L+EA  VF EM+  N  PD   Y  L+D  GKAG    A   ++ M 
Sbjct: 360 YTTLVNGLAKAGRLEEACEVFVEMKENNCSPDAIAYNTLIDGLGKAGEADMACGLFKEMK 419

Query: 598 QAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
             GL PN+ T N ++S   + G+  +A+ L   +   G  P + TY  L+
Sbjct: 420 DRGLVPNLRTYNIMISVLGKAGRQPEAWQLFHDLKEQGAVPDVFTYNTLI 469



 Score =  172 bits (435), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 95/280 (33%), Positives = 153/280 (54%)

Query: 359  DEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVF 418
            D  TYT+++  LG++ +      +  +M  +G +P+VV Y  L+   G+   L+ AL +F
Sbjct: 737  DLFTYTSLLDGLGKSGRLEEAFNMFTKMTEEGHEPDVVAYTSLMDVLGKGGKLSHALIIF 796

Query: 419  KQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKA 478
            + M    C PD VTY +LID   K G ++ A   ++   + G +P+   YS +I+  GK 
Sbjct: 797  RAMAKKRCVPDVVTYSSLIDSLGKEGRVEEAYYFFENSISKGCTPNVGVYSSLIDSFGKK 856

Query: 479  GHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTY 538
            G +  A +LF EM  + C PN+VTYN +++  AKA     A KL  +M+  G  PD VTY
Sbjct: 857  GMVDRALELFEEMQRRQCPPNIVTYNNLLSGLAKAGRLNVAEKLLEEMEKVGCVPDLVTY 916

Query: 539  SIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQ 598
            +I+++ +G  G +DEAE+ F  M+ K  VPD   +  L++  GK   + +A E +++M +
Sbjct: 917  NILIDGVGKMGMVDEAESYFKRMKEKGIVPDVITFTSLIESLGKVDKLLEACELFDSMEE 976

Query: 599  AGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKP 638
             G  P+V T N L+    R G++ +A  +   M   G  P
Sbjct: 977  EGYNPSVVTYNVLIDILGRAGKVHEAAMIFHEMKVKGCMP 1016



 Score =  171 bits (432), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 101/328 (30%), Positives = 163/328 (49%), Gaps = 31/328 (9%)

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
           ++G     HT+T ++  L ++       K  + M    C PNVVTY  L++   +A  L 
Sbjct: 315 KSGIDPGVHTFTVLIDALVKSGNIDEACKFFNGMKNLRCSPNVVTYTTLVNGLAKAGRLE 374

Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
           EA +VF +M+   C PD + Y TLID   KAG  D+A  ++K+M+  GL P+  TY+++I
Sbjct: 375 EACEVFVEMKENNCSPDAIAYNTLIDGLGKAGEADMACGLFKEMKDRGLVPNLRTYNIMI 434

Query: 473 NCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDM------ 526
           + LGKAG    A QLF ++  QG +P++ TYN +I +  K       L + ++M      
Sbjct: 435 SVLGKAGRQPEAWQLFHDLKEQGAVPDVFTYNTLIDVLGKGGQMDKVLAIIKEMVEKGGE 494

Query: 527 ------QNAGFEPD-------------------KVTYSIVMEVLGHCGYLDEAEAVFAEM 561
                  NAG E                     ++TY+ +M    H G++DEA  +   M
Sbjct: 495 CIISRDSNAGHEGTIEGADRTVEYPSLGFKSLGEITYNTLMSAFIHNGHVDEAVKLLEVM 554

Query: 562 RRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQL 621
           ++   +P    Y  LVD  GKAG + +A      M + G  P+V T +SL+++F +  Q 
Sbjct: 555 KKHECIPTVVTYTTLVDGLGKAGRLDEAVSLLREMEKQGCEPSVVTYSSLMASFYKRDQE 614

Query: 622 SDAYHLLQGMLNLGLKPSLQTYTLLLSC 649
            ++  L   M+  G    + TY+L+++C
Sbjct: 615 EESLSLFDEMVRKGCVADVSTYSLVINC 642



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 89/291 (30%), Positives = 146/291 (50%), Gaps = 2/291 (0%)

Query: 316  EALGNTNYSMDAYQANQVLKQLQDHTVALGFFNWLRR--QAGFKHDEHTYTTMVGILGRA 373
            +++ N N   D +    +L  L         FN   +  + G + D   YT+++ +LG+ 
Sbjct: 727  DSMKNQNILPDLFTYTSLLDGLGKSGRLEEAFNMFTKMTEEGHEPDVVAYTSLMDVLGKG 786

Query: 374  RQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTY 433
             +      +   M +  C P+VVTY+ LI S G+   + EA   F+     GC P+   Y
Sbjct: 787  GKLSHALIIFRAMAKKRCVPDVVTYSSLIDSLGKEGRVEEAYYFFENSISKGCTPNVGVY 846

Query: 434  CTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVN 493
             +LID   K G +D A++++++MQ     P+  TY+ +++ L KAG L  A +L  EM  
Sbjct: 847  SSLIDSFGKKGMVDRALELFEEMQRRQCPPNIVTYNNLLSGLAKAGRLNVAEKLLEEMEK 906

Query: 494  QGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDE 553
             GC+P+LVTYNI+I    K      A   ++ M+  G  PD +T++ ++E LG    L E
Sbjct: 907  VGCVPDLVTYNILIDGVGKMGMVDEAESYFKRMKEKGIVPDVITFTSLIESLGKVDKLLE 966

Query: 554  AEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPN 604
            A  +F  M  + + P    Y +L+D+ G+AG V +A   +  M   G  P+
Sbjct: 967  ACELFDSMEEEGYNPSVVTYNVLIDILGRAGKVHEAAMIFHEMKVKGCMPD 1017



 Score =  149 bits (376), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 89/294 (30%), Positives = 148/294 (50%), Gaps = 1/294 (0%)

Query: 355 GFKH-DEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNE 413
           GFK   E TY T++             KLL+ M +  C P VVTY  L+   G+A  L+E
Sbjct: 522 GFKSLGEITYNTLMSAFIHNGHVDEAVKLLEVMKKHECIPTVVTYTTLVDGLGKAGRLDE 581

Query: 414 ALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIIN 473
           A+ + ++M+  GCEP  VTY +L+    K    + ++ ++ +M   G   D  TYS++IN
Sbjct: 582 AVSLLREMEKQGCEPSVVTYSSLMASFYKRDQEEESLSLFDEMVRKGCVADVSTYSLVIN 641

Query: 474 CLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEP 533
           CL K+  +  A  +F  M  +G  P L  Y  +++   K      AL+++ ++Q +   P
Sbjct: 642 CLCKSDDVDQALDVFGRMKEEGMEPLLGNYKTLLSSLVKDEKIDFALQIFNELQESSLVP 701

Query: 534 DKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWY 593
           D   Y+I++  L     +DEA  +   M+ +N +PD   Y  L+D  GK+G + +A+  +
Sbjct: 702 DTFVYNIMVNGLVKSNRVDEACKLVDSMKNQNILPDLFTYTSLLDGLGKSGRLEEAFNMF 761

Query: 594 EAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
             M + G  P+V    SL+    + G+LS A  + + M      P + TY+ L+
Sbjct: 762 TKMTEEGHEPDVVAYTSLMDVLGKGGKLSHALIIFRAMAKKRCVPDVVTYSSLI 815



 Score =  148 bits (373), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 78/244 (31%), Positives = 138/244 (56%), Gaps = 7/244 (2%)

Query: 359  DEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVF 418
            D  TY++++  LG+  +        +  +  GC PNV  Y+ LI S+G+   ++ AL++F
Sbjct: 807  DVVTYSSLIDSLGKEGRVEEAYYFFENSISKGCTPNVGVYSSLIDSFGKKGMVDRALELF 866

Query: 419  KQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKA 478
            ++MQ   C P+ VTY  L+   AKAG L+VA  + ++M+  G  PD  TY+++I+ +GK 
Sbjct: 867  EEMQRRQCPPNIVTYNNLLSGLAKAGRLNVAEKLLEEMEKVGCVPDLVTYNILIDGVGKM 926

Query: 479  GHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTY 538
            G +  A   F  M  +G +P+++T+  +I    K      A +L+  M+  G+ P  VTY
Sbjct: 927  GMVDEAESYFKRMKEKGIVPDVITFTSLIESLGKVDKLLEACELFDSMEEEGYNPSVVTY 986

Query: 539  SIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQ 598
            ++++++LG  G + EA  +F EM+ K  +PD    G+ + +  +  +VR+  + + A L+
Sbjct: 987  NVLIDILGRAGKVHEAAMIFHEMKVKGCMPD----GITIGIMKRILSVRE--QQFHA-LE 1039

Query: 599  AGLR 602
             GLR
Sbjct: 1040 EGLR 1043



 Score =  126 bits (317), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 104/391 (26%), Positives = 172/391 (43%), Gaps = 40/391 (10%)

Query: 296 NVVESVSRILRQWKWGPLAEEA-----LGNTNYSMDAYQANQVLKQLQ---DHTVALGFF 347
           NVV   + +    K G L E       +   N S DA   N ++  L    +  +A G F
Sbjct: 356 NVVTYTTLVNGLAKAGRLEEACEVFVEMKENNCSPDAIAYNTLIDGLGKAGEADMACGLF 415

Query: 348 NWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGR 407
             ++ + G   +  TY  M+ +LG+A +     +L   +   G  P+V TYN LI   G+
Sbjct: 416 KEMKDR-GLVPNLRTYNIMISVLGKAGRQPEAWQLFHDLKEQGAVPDVFTYNTLIDVLGK 474

Query: 408 ANYLNEALDVFKQMQVVGCE-----------------PDR--------------VTYCTL 436
              +++ L + K+M   G E                  DR              +TY TL
Sbjct: 475 GGQMDKVLAIIKEMVEKGGECIISRDSNAGHEGTIEGADRTVEYPSLGFKSLGEITYNTL 534

Query: 437 IDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGC 496
           +      G +D A+ + + M+     P   TY+ +++ LGKAG L  A  L  EM  QGC
Sbjct: 535 MSAFIHNGHVDEAVKLLEVMKKHECIPTVVTYTTLVDGLGKAGRLDEAVSLLREMEKQGC 594

Query: 497 IPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEA 556
            P++VTY+ ++A   K    + +L L+ +M   G   D  TYS+V+  L     +D+A  
Sbjct: 595 EPSVVTYSSLMASFYKRDQEEESLSLFDEMVRKGCVADVSTYSLVINCLCKSDDVDQALD 654

Query: 557 VFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFL 616
           VF  M+ +   P    Y  L+    K   +  A + +  + ++ L P+    N +++  +
Sbjct: 655 VFGRMKEEGMEPLLGNYKTLLSSLVKDEKIDFALQIFNELQESSLVPDTFVYNIMVNGLV 714

Query: 617 RVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
           +  ++ +A  L+  M N  + P L TYT LL
Sbjct: 715 KSNRVDEACKLVDSMKNQNILPDLFTYTSLL 745



 Score = 82.0 bits (201), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 51/197 (25%), Positives = 93/197 (47%)

Query: 457 QAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNY 516
           Q  G S    TY+++I  L  A    A  Q+   M  +G   ++     ++       N 
Sbjct: 174 QQDGYSHTVGTYTLMIKRLAGAQETDAVVQILTAMWKEGHRISMHLLTSLLRTFGSTNNV 233

Query: 517 QSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLL 576
             AL+++  M++ G  P    Y+ V+E+L   G+   A  VF ++ +    PD   + + 
Sbjct: 234 SGALEIFNQMKSFGCNPSTNMYNFVLELLVKGGFYHSAVIVFGKLGQFRIQPDAQTFRIF 293

Query: 577 VDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGL 636
           V  + ++G +  A E  + M+++G+ P V T   L+ A ++ G + +A     GM NL  
Sbjct: 294 VHSFNRSGRLDPAAEPIQEMIKSGIDPGVHTFTVLIDALVKSGNIDEACKFFNGMKNLRC 353

Query: 637 KPSLQTYTLLLSCCTEA 653
            P++ TYT L++   +A
Sbjct: 354 SPNVVTYTTLVNGLAKA 370



 Score = 65.9 bits (159), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 36/120 (30%), Positives = 58/120 (48%)

Query: 352  RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
             + G   D  TY  ++  +G+            +M   G  P+V+T+  LI S G+ + L
Sbjct: 905  EKVGCVPDLVTYNILIDGVGKMGMVDEAESYFKRMKEKGIVPDVITFTSLIESLGKVDKL 964

Query: 412  NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
             EA ++F  M+  G  P  VTY  LIDI  +AG +  A  ++ +M+  G  PD  T  ++
Sbjct: 965  LEACELFDSMEEEGYNPSVVTYNVLIDILGRAGKVHEAAMIFHEMKVKGCMPDGITIGIM 1024


>gi|222630937|gb|EEE63069.1| hypothetical protein OsJ_17877 [Oryza sativa Japonica Group]
          Length = 702

 Score =  179 bits (454), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 97/298 (32%), Positives = 154/298 (51%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           R AG + D+ T +T++   GR           + +   G  P VVTYN L+  +G+A   
Sbjct: 152 RAAGVEPDDFTASTVIAACGRDGLLDQAVAFFEDLKARGHVPCVVTYNALLQVFGKAGNY 211

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
            EAL V K+M+  GC+PD VTY  L   +A+AGF + A      M + GL P+TFTY+ +
Sbjct: 212 TEALRVLKEMEDSGCQPDAVTYNELAGTYARAGFFEEAAKCLDTMTSKGLLPNTFTYNTV 271

Query: 472 INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF 531
           +      G +  A  LF  M   G +PN+ TYN++  +  K   + + L++  +M  +G 
Sbjct: 272 MTAYANVGRVDEALALFDRMKKNGYVPNVNTYNLIFGMLGKKSRFTAMLEMLEEMSRSGC 331

Query: 532 EPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWE 591
            P++VT++ ++ V G  G  D    V   M+          Y  L+  +G+ G+   A++
Sbjct: 332 TPNRVTWNTMLAVCGKRGMEDYVTRVLNGMKSCGVELSRDTYNTLISAYGRCGSRTYAFK 391

Query: 592 WYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSC 649
            Y+ M+ +G  P + T N+LL+   R G  S A  ++  ML  G KP+ Q+Y+LLL C
Sbjct: 392 MYDEMISSGFTPCLTTYNALLNVLSRQGDWSTAQSIVSKMLKNGFKPNDQSYSLLLQC 449



 Score =  162 bits (411), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 103/346 (29%), Positives = 168/346 (48%), Gaps = 5/346 (1%)

Query: 307 QWKWGPLAEEALGNTNYSMDAYQANQVLKQLQ---DHTVALGFFNWLRRQAGFKHDEHTY 363
            W+W  LA     +   + DA     V++ L     H V     + +    G + D   Y
Sbjct: 34  HWEWA-LALLRWASDEGAADAAALEMVVRALGREGQHDVVCDLLDEMPLPPGSRLDVRAY 92

Query: 364 TTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGR-ANYLNEALDVFKQMQ 422
           TT++  L RA ++    +L  ++ R G  P +VTYN ++  YGR        + + ++M+
Sbjct: 93  TTVLHALSRAGRYERALQLFAELRRQGVVPTIVTYNVVLDVYGRMGRSWPRIVALLEEMR 152

Query: 423 VVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQ 482
             G EPD  T  T+I    + G LD A+  ++ ++A G  P   TY+ ++   GKAG+  
Sbjct: 153 AAGVEPDDFTASTVIAACGRDGLLDQAVAFFEDLKARGHVPCVVTYNALLQVFGKAGNYT 212

Query: 483 AAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVM 542
            A ++  EM + GC P+ VTYN +    A+A  ++ A K    M + G  P+  TY+ VM
Sbjct: 213 EALRVLKEMEDSGCQPDAVTYNELAGTYARAGFFEEAAKCLDTMTSKGLLPNTFTYNTVM 272

Query: 543 EVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLR 602
               + G +DEA A+F  M++  +VP+   Y L+  + GK        E  E M ++G  
Sbjct: 273 TAYANVGRVDEALALFDRMKKNGYVPNVNTYNLIFGMLGKKSRFTAMLEMLEEMSRSGCT 332

Query: 603 PNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
           PN  T N++L+   + G       +L GM + G++ S  TY  L+S
Sbjct: 333 PNRVTWNTMLAVCGKRGMEDYVTRVLNGMKSCGVELSRDTYNTLIS 378



 Score =  145 bits (367), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 87/310 (28%), Positives = 153/310 (49%), Gaps = 4/310 (1%)

Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQM-VRDGCQPNVVTYNRL 401
           AL    W   +     D      +V  LGR  Q   +  LLD+M +  G + +V  Y  +
Sbjct: 38  ALALLRWASDEGA--ADAAALEMVVRALGREGQHDVVCDLLDEMPLPPGSRLDVRAYTTV 95

Query: 402 IHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAG-FLDVAMDMYKKMQAAG 460
           +H+  RA     AL +F +++  G  P  VTY  ++D++ + G      + + ++M+AAG
Sbjct: 96  LHALSRAGRYERALQLFAELRRQGVVPTIVTYNVVLDVYGRMGRSWPRIVALLEEMRAAG 155

Query: 461 LSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSAL 520
           + PD FT S +I   G+ G L  A   F ++  +G +P +VTYN ++ +  KA NY  AL
Sbjct: 156 VEPDDFTASTVIAACGRDGLLDQAVAFFEDLKARGHVPCVVTYNALLQVFGKAGNYTEAL 215

Query: 521 KLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLW 580
           ++ ++M+++G +PD VTY+ +       G+ +EA      M  K  +P+   Y  ++  +
Sbjct: 216 RVLKEMEDSGCQPDAVTYNELAGTYARAGFFEEAAKCLDTMTSKGLLPNTFTYNTVMTAY 275

Query: 581 GKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSL 640
              G V +A   ++ M + G  PNV T N +     +  + +    +L+ M   G  P+ 
Sbjct: 276 ANVGRVDEALALFDRMKKNGYVPNVNTYNLIFGMLGKKSRFTAMLEMLEEMSRSGCTPNR 335

Query: 641 QTYTLLLSCC 650
            T+  +L+ C
Sbjct: 336 VTWNTMLAVC 345



 Score =  142 bits (359), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 83/322 (25%), Positives = 163/322 (50%), Gaps = 12/322 (3%)

Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLI 402
           AL  F+ +++  G+  + +TY  + G+LG+  +F A+ ++L++M R GC PN VT+N ++
Sbjct: 284 ALALFDRMKKN-GYVPNVNTYNLIFGMLGKKSRFTAMLEMLEEMSRSGCTPNRVTWNTML 342

Query: 403 HSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLS 462
              G+    +    V   M+  G E  R TY TLI  + + G    A  MY +M ++G +
Sbjct: 343 AVCGKRGMEDYVTRVLNGMKSCGVELSRDTYNTLISAYGRCGSRTYAFKMYDEMISSGFT 402

Query: 463 PDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKL 522
           P   TY+ ++N L + G    A  +  +M+  G  PN  +Y++++   AK  N      +
Sbjct: 403 PCLTTYNALLNVLSRQGDWSTAQSIVSKMLKNGFKPNDQSYSLLLQCYAKGGNAAGIESI 462

Query: 523 YRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGK 582
            +++      P  V    ++     C  L+  E  F E++ + + PD  ++  ++ ++ K
Sbjct: 463 EKEVYVGTIFPSWVILRTLVIANFKCRRLEGVEKAFQEVKAQGYKPDLVIFNSMLAMYAK 522

Query: 583 AGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQT 642
            G   KA E ++++ Q+GL P++ T NSL+  + +  +  +A  +L+ + +  +KP + +
Sbjct: 523 NGLYSKATEMFDSIKQSGLSPDLITYNSLMDMYAKSNESWEAEKILKQLKSSQVKPDVVS 582

Query: 643 YTLLLSCCTEARSPYDMGFCHE 664
           Y  +++           GFC +
Sbjct: 583 YNTVIN-----------GFCKQ 593



 Score =  141 bits (355), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 96/332 (28%), Positives = 154/332 (46%), Gaps = 9/332 (2%)

Query: 294 TGNVVESV-SRILRQWKWGPLAEEALGNTNYSMDAYQANQVLKQ-----LQDHTVALGFF 347
           T NVV  V  R+ R W       E +       D + A+ V+       L D  VA  FF
Sbjct: 126 TYNVVLDVYGRMGRSWPRIVALLEEMRAAGVEPDDFTASTVIAACGRDGLLDQAVA--FF 183

Query: 348 NWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGR 407
             L+ + G      TY  ++ + G+A  +    ++L +M   GCQP+ VTYN L  +Y R
Sbjct: 184 EDLKAR-GHVPCVVTYNALLQVFGKAGNYTEALRVLKEMEDSGCQPDAVTYNELAGTYAR 242

Query: 408 ANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFT 467
           A +  EA      M   G  P+  TY T++  +A  G +D A+ ++ +M+  G  P+  T
Sbjct: 243 AGFFEEAAKCLDTMTSKGLLPNTFTYNTVMTAYANVGRVDEALALFDRMKKNGYVPNVNT 302

Query: 468 YSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQ 527
           Y++I   LGK     A  ++  EM   GC PN VT+N M+A+  K        ++   M+
Sbjct: 303 YNLIFGMLGKKSRFTAMLEMLEEMSRSGCTPNRVTWNTMLAVCGKRGMEDYVTRVLNGMK 362

Query: 528 NAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVR 587
           + G E  + TY+ ++   G CG    A  ++ EM    + P    Y  L+++  + G+  
Sbjct: 363 SCGVELSRDTYNTLISAYGRCGSRTYAFKMYDEMISSGFTPCLTTYNALLNVLSRQGDWS 422

Query: 588 KAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVG 619
            A      ML+ G +PN  + + LL  + + G
Sbjct: 423 TAQSIVSKMLKNGFKPNDQSYSLLLQCYAKGG 454



 Score = 93.2 bits (230), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 61/275 (22%), Positives = 126/275 (45%)

Query: 354 AGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNE 413
           +GF     TY  ++ +L R   +     ++ +M+++G +PN  +Y+ L+  Y +      
Sbjct: 399 SGFTPCLTTYNALLNVLSRQGDWSTAQSIVSKMLKNGFKPNDQSYSLLLQCYAKGGNAAG 458

Query: 414 ALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIIN 473
              + K++ V    P  V   TL+  + K   L+     +++++A G  PD   ++ ++ 
Sbjct: 459 IESIEKEVYVGTIFPSWVILRTLVIANFKCRRLEGVEKAFQEVKAQGYKPDLVIFNSMLA 518

Query: 474 CLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEP 533
              K G    A ++F  +   G  P+L+TYN ++ + AK+     A K+ + ++++  +P
Sbjct: 519 MYAKNGLYSKATEMFDSIKQSGLSPDLITYNSLMDMYAKSNESWEAEKILKQLKSSQVKP 578

Query: 534 DKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWY 593
           D V+Y+ V+      G + EA+ + +EM      P    Y  LV  +       +A E  
Sbjct: 579 DVVSYNTVINGFCKQGLIKEAQRILSEMIADGMAPCVVTYHTLVGGYASLEMFNEAREVV 638

Query: 594 EAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLL 628
             M+   L+P   T   ++ ++ +  +  +A   L
Sbjct: 639 NYMIHHNLKPMELTYRRVVDSYCKAKRYDEAREFL 673



 Score = 92.0 bits (227), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 46/190 (24%), Positives = 100/190 (52%)

Query: 372 RARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRV 431
           + R+   + K   ++   G +P++V +N ++  Y +    ++A ++F  ++  G  PD +
Sbjct: 487 KCRRLEGVEKAFQEVKAQGYKPDLVIFNSMLAMYAKNGLYSKATEMFDSIKQSGLSPDLI 546

Query: 432 TYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEM 491
           TY +L+D++AK+     A  + K+++++ + PD  +Y+ +IN   K G ++ A ++  EM
Sbjct: 547 TYNSLMDMYAKSNESWEAEKILKQLKSSQVKPDVVSYNTVINGFCKQGLIKEAQRILSEM 606

Query: 492 VNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYL 551
           +  G  P +VTY+ ++   A    +  A ++   M +   +P ++TY  V++        
Sbjct: 607 IADGMAPCVVTYHTLVGGYASLEMFNEAREVVNYMIHHNLKPMELTYRRVVDSYCKAKRY 666

Query: 552 DEAEAVFAEM 561
           DEA    +E+
Sbjct: 667 DEAREFLSEI 676



 Score = 78.2 bits (191), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 41/177 (23%), Positives = 85/177 (48%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           +  G+K D   + +M+ +  +   +    ++ D + + G  P+++TYN L+  Y ++N  
Sbjct: 502 KAQGYKPDLVIFNSMLAMYAKNGLYSKATEMFDSIKQSGLSPDLITYNSLMDMYAKSNES 561

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
            EA  + KQ++    +PD V+Y T+I+   K G +  A  +  +M A G++P   TY  +
Sbjct: 562 WEAEKILKQLKSSQVKPDVVSYNTVINGFCKQGLIKEAQRILSEMIADGMAPCVVTYHTL 621

Query: 472 INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQN 528
           +           A ++   M++    P  +TY  ++    KA+ Y  A +   ++ +
Sbjct: 622 VGGYASLEMFNEAREVVNYMIHHNLKPMELTYRRVVDSYCKAKRYDEAREFLSEISD 678



 Score = 78.2 bits (191), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 63/261 (24%), Positives = 115/261 (44%), Gaps = 16/261 (6%)

Query: 462 SPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIP-----NLVTYNIMIALQAKARNY 516
           + D     +++  LG+ G     H + C+++++  +P     ++  Y  ++   ++A  Y
Sbjct: 50  AADAAALEMVVRALGREGQ----HDVVCDLLDEMPLPPGSRLDVRAYTTVLHALSRAGRY 105

Query: 517 QSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGY-LDEAEAVFAEMRRKNWVPDEPVYGL 575
           + AL+L+ +++  G  P  VTY++V++V G  G       A+  EMR     PD+     
Sbjct: 106 ERALQLFAELRRQGVVPTIVTYNVVLDVYGRMGRSWPRIVALLEEMRAAGVEPDDFTAST 165

Query: 576 LVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLG 635
           ++   G+ G + +A  ++E +   G  P V T N+LL  F + G  ++A  +L+ M + G
Sbjct: 166 VIAACGRDGLLDQAVAFFEDLKARGHVPCVVTYNALLQVFGKAGNYTEALRVLKEMEDSG 225

Query: 636 LKPSLQTYTLLLSCCTEARSPYDMGFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVG 695
            +P   TY  L      A    +   C + M   G   + F  +             +VG
Sbjct: 226 CQPDAVTYNELAGTYARAGFFEEAAKCLDTMTSKGLLPNTFTYNTV------MTAYANVG 279

Query: 696 SFLEMMHSEDRESKRGLVDAV 716
              E +   DR  K G V  V
Sbjct: 280 RVDEALALFDRMKKNGYVPNV 300


>gi|255574572|ref|XP_002528197.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223532409|gb|EEF34204.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 642

 Score =  179 bits (453), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 127/436 (29%), Positives = 209/436 (47%), Gaps = 28/436 (6%)

Query: 234 RRIVQPRSKAHSNRLNSNFKSNLQPSDAKVVECVSERFSKPSREMKIPAGLAPFSRHFA- 292
           + IV  RS + S  L    K     +D ++V      F  PS   K+     P +R F+ 
Sbjct: 7   KSIVLKRSISTSPHLYERIKQ----TDNEIVN----MFRVPSMNNKMQN--LPMNRKFSG 56

Query: 293 ---STGNVVESVSRILRQWKWGPLAEEALGNTNYSMDAYQANQVLKQLQDHTVALGFFNW 349
              ST  + E   RIL+ +KWGP AE+AL      +D    ++VLK   +  V + FF W
Sbjct: 57  KDTSTRKLDERFIRILKIFKWGPDAEKALEVLKLKVDHRLVHEVLKIDVEINVKIQFFKW 116

Query: 350 LRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDG-CQPNVVTYNRLIHSYGRA 408
             ++  F+HD  ++  ++  L  A  +G + K +  MVR   C  + V  + ++   G+A
Sbjct: 117 AGKRRNFEHDSSSFMALIHSLDEAGFYGEMWKTIQDMVRSSTCVISSVYLSEIVKLLGKA 176

Query: 409 NYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAG-LSPDTFT 467
             +N+AL VF Q++   C+P   TY ++I +  + G L+   ++Y +M   G   PDT T
Sbjct: 177 KMVNKALSVFYQIKGRKCKPAATTYNSMILMLKQEGHLEKVHEIYNEMCNDGNCFPDTVT 236

Query: 468 YSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQ 527
           YS +I+  GK GH  +A +LF EM   G  P    Y  ++ +  K    + AL + ++M+
Sbjct: 237 YSALISAFGKLGHYDSAIRLFDEMKENGLYPTAKIYTTLLGIYFKLDKVEKALDVIKEMK 296

Query: 528 NAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVR 587
           + G      TY+  ++ LG  G +D+A  VF +M +    PD  +   L+++ GK G + 
Sbjct: 297 DKGCTLTVFTYTEWIKGLGKAGRVDDAYRVFLDMIKDGCKPDVVLINSLINILGKVGRLE 356

Query: 588 KAWEWYEAMLQAGLRPNVPTCNSLLSAFLRV-GQLSDAYHLLQGMLNLGLKPSLQTYTLL 646
              + +  M     +PNV T N+++ A        S+A    + M   G+ PS  TY++L
Sbjct: 357 VTLKLFRKMESWQCKPNVVTYNTVIKALFECKAPASEAASWFEKMKGCGIAPSSFTYSIL 416

Query: 647 LSCCTEARSPYDMGFC 662
           +            GFC
Sbjct: 417 ID-----------GFC 421



 Score =  145 bits (366), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 92/324 (28%), Positives = 158/324 (48%), Gaps = 37/324 (11%)

Query: 362 TYTTMVGILGRARQFGAINKLLDQMVRDG-CQPNVVTYNRLIHSYGRANYLNEALDVFKQ 420
           TY +M+ +L +      ++++ ++M  DG C P+ VTY+ LI ++G+  + + A+ +F +
Sbjct: 200 TYNSMILMLKQEGHLEKVHEIYNEMCNDGNCFPDTVTYSALISAFGKLGHYDSAIRLFDE 259

Query: 421 MQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGH 480
           M+  G  P    Y TL+ I+ K   ++ A+D+ K+M+  G +   FTY+  I  LGKAG 
Sbjct: 260 MKENGLYPTAKIYTTLLGIYFKLDKVEKALDVIKEMKDKGCTLTVFTYTEWIKGLGKAGR 319

Query: 481 LQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSI 540
           +  A+++F +M+  GC P++V  N +I +  K    +  LKL+R M++   +P+ VTY+ 
Sbjct: 320 VDDAYRVFLDMIKDGCKPDVVLINSLINILGKVGRLEVTLKLFRKMESWQCKPNVVTYNT 379

Query: 541 VMEVLGHC-GYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQA 599
           V++ L  C     EA + F +M+     P    Y +L+D + K   + KA    E M + 
Sbjct: 380 VIKALFECKAPASEAASWFEKMKGCGIAPSSFTYSILIDGFCKTNRIEKALLLLEEMDEK 439

Query: 600 GLRPNVPTCNSLLSA-----------------------------------FLRVGQLSDA 624
           G  P      SL+++                                   F + G+LS+A
Sbjct: 440 GFPPCPAAYCSLINSLGKVKRYEAANELFLELKENCGHSSARVYAVMIKHFGKCGRLSEA 499

Query: 625 YHLLQGMLNLGLKPSLQTYTLLLS 648
             L   M  LG KP +  Y  L+S
Sbjct: 500 VDLFNEMEKLGSKPDVYAYNALMS 523



 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 94/328 (28%), Positives = 163/328 (49%), Gaps = 19/328 (5%)

Query: 329 QANQVLKQLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVR 388
           +A  V+K+++D    L  F              TYT  +  LG+A +     ++   M++
Sbjct: 287 KALDVIKEMKDKGCTLTVF--------------TYTEWIKGLGKAGRVDDAYRVFLDMIK 332

Query: 389 DGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLID--IHAKAGFL 446
           DGC+P+VV  N LI+  G+   L   L +F++M+   C+P+ VTY T+I      KA   
Sbjct: 333 DGCKPDVVLINSLINILGKVGRLEVTLKLFRKMESWQCKPNVVTYNTVIKALFECKAPAS 392

Query: 447 DVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIM 506
           + A   ++KM+  G++P +FTYS++I+   K   ++ A  L  EM  +G  P    Y  +
Sbjct: 393 EAA-SWFEKMKGCGIAPSSFTYSILIDGFCKTNRIEKALLLLEEMDEKGFPPCPAAYCSL 451

Query: 507 IALQAKARNYQSALKLYRDM-QNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKN 565
           I    K + Y++A +L+ ++ +N G    +V Y+++++  G CG L EA  +F EM +  
Sbjct: 452 INSLGKVKRYEAANELFLELKENCGHSSARV-YAVMIKHFGKCGRLSEAVDLFNEMEKLG 510

Query: 566 WVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAY 625
             PD   Y  L+    +AG + +A      M + G  P++ + N +L+   R G    A 
Sbjct: 511 SKPDVYAYNALMSGMVRAGMIDEAQSLLRTMDENGCSPDLNSHNIILNGLARTGVPDRAI 570

Query: 626 HLLQGMLNLGLKPSLQTYTLLLSCCTEA 653
            +   M +  +KP   +Y  +L C + A
Sbjct: 571 EMFAKMKSSIIKPDAVSYNTVLGCLSHA 598



 Score =  137 bits (345), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 88/326 (26%), Positives = 145/326 (44%), Gaps = 36/326 (11%)

Query: 359 DEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVF 418
           D  TY+ ++   G+   + +  +L D+M  +G  P    Y  L+  Y + + + +ALDV 
Sbjct: 233 DTVTYSALISAFGKLGHYDSAIRLFDEMKENGLYPTAKIYTTLLGIYFKLDKVEKALDVI 292

Query: 419 KQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKA 478
           K+M+  GC     TY   I    KAG +D A  ++  M   G  PD    + +IN LGK 
Sbjct: 293 KEMKDKGCTLTVFTYTEWIKGLGKAGRVDDAYRVFLDMIKDGCKPDVVLINSLINILGKV 352

Query: 479 GHLQAAHQLFCEMVNQGCIPNLVTYN---------------------------------- 504
           G L+   +LF +M +  C PN+VTYN                                  
Sbjct: 353 GRLEVTLKLFRKMESWQCKPNVVTYNTVIKALFECKAPASEAASWFEKMKGCGIAPSSFT 412

Query: 505 --IMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMR 562
             I+I    K    + AL L  +M   GF P    Y  ++  LG     + A  +F E++
Sbjct: 413 YSILIDGFCKTNRIEKALLLLEEMDEKGFPPCPAAYCSLINSLGKVKRYEAANELFLELK 472

Query: 563 RKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLS 622
                    VY +++  +GK G + +A + +  M + G +P+V   N+L+S  +R G + 
Sbjct: 473 ENCGHSSARVYAVMIKHFGKCGRLSEAVDLFNEMEKLGSKPDVYAYNALMSGMVRAGMID 532

Query: 623 DAYHLLQGMLNLGLKPSLQTYTLLLS 648
           +A  LL+ M   G  P L ++ ++L+
Sbjct: 533 EAQSLLRTMDENGCSPDLNSHNIILN 558



 Score =  108 bits (271), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 55/194 (28%), Positives = 107/194 (55%)

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
           + GF      Y +++  LG+ +++ A N+L  ++  +    +   Y  +I  +G+   L+
Sbjct: 438 EKGFPPCPAAYCSLINSLGKVKRYEAANELFLELKENCGHSSARVYAVMIKHFGKCGRLS 497

Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
           EA+D+F +M+ +G +PD   Y  L+    +AG +D A  + + M   G SPD  ++++I+
Sbjct: 498 EAVDLFNEMEKLGSKPDVYAYNALMSGMVRAGMIDEAQSLLRTMDENGCSPDLNSHNIIL 557

Query: 473 NCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFE 532
           N L + G    A ++F +M +    P+ V+YN ++   + A  ++ A KL R+M   GFE
Sbjct: 558 NGLARTGVPDRAIEMFAKMKSSIIKPDAVSYNTVLGCLSHAGLFEEAAKLMREMNLKGFE 617

Query: 533 PDKVTYSIVMEVLG 546
            + +TY+ ++E +G
Sbjct: 618 YNNITYTSILEAVG 631



 Score = 96.7 bits (239), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 59/242 (24%), Positives = 113/242 (46%), Gaps = 2/242 (0%)

Query: 348 NWLRRQ--AGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSY 405
           +W  +    G      TY+ ++    +  +      LL++M   G  P    Y  LI+S 
Sbjct: 396 SWFEKMKGCGIAPSSFTYSILIDGFCKTNRIEKALLLLEEMDEKGFPPCPAAYCSLINSL 455

Query: 406 GRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDT 465
           G+      A ++F +++          Y  +I    K G L  A+D++ +M+  G  PD 
Sbjct: 456 GKVKRYEAANELFLELKENCGHSSARVYAVMIKHFGKCGRLSEAVDLFNEMEKLGSKPDV 515

Query: 466 FTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRD 525
           + Y+ +++ + +AG +  A  L   M   GC P+L ++NI++   A+      A++++  
Sbjct: 516 YAYNALMSGMVRAGMIDEAQSLLRTMDENGCSPDLNSHNIILNGLARTGVPDRAIEMFAK 575

Query: 526 MQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGN 585
           M+++  +PD V+Y+ V+  L H G  +EA  +  EM  K +  +   Y  +++  GK   
Sbjct: 576 MKSSIIKPDAVSYNTVLGCLSHAGLFEEAAKLMREMNLKGFEYNNITYTSILEAVGKVDE 635

Query: 586 VR 587
            R
Sbjct: 636 DR 637


>gi|224130790|ref|XP_002328377.1| predicted protein [Populus trichocarpa]
 gi|222838092|gb|EEE76457.1| predicted protein [Populus trichocarpa]
          Length = 688

 Score =  179 bits (453), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 104/315 (33%), Positives = 165/315 (52%), Gaps = 11/315 (3%)

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
           + G + D  T+TT++  +    +     +L ++MVR G +P+V++YN LI+    +   N
Sbjct: 156 KLGIQPDVITFTTLINGVCNEGKIKVAVELYNEMVRSGHEPDVISYNTLINGLCNSGNTN 215

Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
            A+ VFK+M+  GC+P+ VTY T+ID   K   ++ AMD   +M   G+ PD  TY+ I+
Sbjct: 216 MAVHVFKKMEQNGCKPNVVTYNTIIDSLCKDRLVNDAMDFLSEMVGRGIPPDAITYNSIV 275

Query: 473 NCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFE 532
           + L   G L  A +LF  M   GC P++VTYNI+I    K R    A     +M + G  
Sbjct: 276 HGLCCLGQLNEATRLFKRMEQNGCKPDVVTYNIIIDSLYKDRLVNDAADFLSEMVDQGIP 335

Query: 533 PDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEW 592
           PD VTY+ ++  L + G L+EA  +F +M +K   PD   Y  ++D   K   V  A E+
Sbjct: 336 PDVVTYTTILHGLCYLGQLNEAIRLFKKMEQKGCKPDVVAYNTIIDSLCKDRLVNDAMEF 395

Query: 593 YEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTE 652
              M+  G+ PN  T +++L  F  +GQL +A  L + M+   + P+  T+++L+     
Sbjct: 396 LSEMVDRGIPPNAVTYSTILHGFCNLGQLDEATQLFKEMVGRNVMPNTLTFSILVD---- 451

Query: 653 ARSPYDMGFCHELMA 667
                  G C E M 
Sbjct: 452 -------GLCQEGMV 459



 Score =  176 bits (447), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 115/407 (28%), Positives = 199/407 (48%), Gaps = 24/407 (5%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
            Q G K +  TY T++  L + R        L +MV  G  P+ +TYN ++H       L
Sbjct: 225 EQNGCKPNVVTYNTIIDSLCKDRLVNDAMDFLSEMVGRGIPPDAITYNSIVHGLCCLGQL 284

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
           NEA  +FK+M+  GC+PD VTY  +ID   K   ++ A D   +M   G+ PD  TY+ I
Sbjct: 285 NEATRLFKRMEQNGCKPDVVTYNIIIDSLYKDRLVNDAADFLSEMVDQGIPPDVVTYTTI 344

Query: 472 INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF 531
           ++ L   G L  A +LF +M  +GC P++V YN +I    K R    A++   +M + G 
Sbjct: 345 LHGLCYLGQLNEAIRLFKKMEQKGCKPDVVAYNTIIDSLCKDRLVNDAMEFLSEMVDRGI 404

Query: 532 EPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWE 591
            P+ VTYS ++    + G LDEA  +F EM  +N +P+   + +LVD   + G V +A  
Sbjct: 405 PPNAVTYSTILHGFCNLGQLDEATQLFKEMVGRNVMPNTLTFSILVDGLCQEGMVSEARW 464

Query: 592 WYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCT 651
            +E M + G+ PN+ T N+L++ +    ++++A  + + M+  G  P L +Y +L++   
Sbjct: 465 VFETMTEKGVEPNIYTYNALMNGYCLRCKMNEARKVFEIMVGKGCAPDLHSYNILIN--- 521

Query: 652 EARSPYDMGFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRD------HVGSFLEMMHSED 705
                   G+C+    +    A +  +S+    P+            +VG  L+      
Sbjct: 522 --------GYCNS-RRMDKAKALLTQMSVKKLTPNTVTYNTIMKGLCYVGRLLDAQELFK 572

Query: 706 RESKRGLVDAVVDF------LHKSGLKEEAGSVWEVAAQKNVYPDAV 746
           +    G++  ++ +      L K G  +EA  +++   +K + PD +
Sbjct: 573 KMCSSGMLPTLMTYSILLNGLCKHGHLDEALKLFKSMKEKKLEPDII 619



 Score =  163 bits (412), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 110/383 (28%), Positives = 182/383 (47%), Gaps = 2/383 (0%)

Query: 363 YTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQ 422
           +   +G + + +Q+  +  L +QM   G    V + N LI+   R N+++ A+ V+ +M 
Sbjct: 96  FGKFLGSIAKMKQYSTVVYLCNQMDLFGVTHTVYSLNILINCLCRLNHVDFAVSVWGKMF 155

Query: 423 VVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQ 482
            +G +PD +T+ TLI+     G + VA+++Y +M  +G  PD  +Y+ +IN L  +G+  
Sbjct: 156 KLGIQPDVITFTTLINGVCNEGKIKVAVELYNEMVRSGHEPDVISYNTLINGLCNSGNTN 215

Query: 483 AAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVM 542
            A  +F +M   GC PN+VTYN +I    K R    A+    +M   G  PD +TY+ ++
Sbjct: 216 MAVHVFKKMEQNGCKPNVVTYNTIIDSLCKDRLVNDAMDFLSEMVGRGIPPDAITYNSIV 275

Query: 543 EVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLR 602
             L   G L+EA  +F  M +    PD   Y +++D   K   V  A ++   M+  G+ 
Sbjct: 276 HGLCCLGQLNEATRLFKRMEQNGCKPDVVTYNIIIDSLYKDRLVNDAADFLSEMVDQGIP 335

Query: 603 PNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTY-TLLLSCCTEARSPYDMGF 661
           P+V T  ++L     +GQL++A  L + M   G KP +  Y T++ S C +      M F
Sbjct: 336 PDVVTYTTILHGLCYLGQLNEAIRLFKKMEQKGCKPDVVAYNTIIDSLCKDRLVNDAMEF 395

Query: 662 CHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRESKRGLVDAVVDFLH 721
             E M   G P +    S    G       D      + M   +          +VD L 
Sbjct: 396 LSE-MVDRGIPPNAVTYSTILHGFCNLGQLDEATQLFKEMVGRNVMPNTLTFSILVDGLC 454

Query: 722 KSGLKEEAGSVWEVAAQKNVYPD 744
           + G+  EA  V+E   +K V P+
Sbjct: 455 QEGMVSEARWVFETMTEKGVEPN 477



 Score =  142 bits (358), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 85/295 (28%), Positives = 149/295 (50%), Gaps = 4/295 (1%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           G   D  TYTT++  L    Q     +L  +M + GC+P+VV YN +I S  +   +N+A
Sbjct: 333 GIPPDVVTYTTILHGLCYLGQLNEAIRLFKKMEQKGCKPDVVAYNTIIDSLCKDRLVNDA 392

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
           ++   +M   G  P+ VTY T++      G LD A  ++K+M    + P+T T+S++++ 
Sbjct: 393 MEFLSEMVDRGIPPNAVTYSTILHGFCNLGQLDEATQLFKEMVGRNVMPNTLTFSILVDG 452

Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPD 534
           L + G +  A  +F  M  +G  PN+ TYN ++           A K++  M   G  PD
Sbjct: 453 LCQEGMVSEARWVFETMTEKGVEPNIYTYNALMNGYCLRCKMNEARKVFEIMVGKGCAPD 512

Query: 535 KVTYSIVMEVLGHCG--YLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEW 592
             +Y+I++   G+C    +D+A+A+  +M  K   P+   Y  ++      G +  A E 
Sbjct: 513 LHSYNILIN--GYCNSRRMDKAKALLTQMSVKKLTPNTVTYNTIMKGLCYVGRLLDAQEL 570

Query: 593 YEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
           ++ M  +G+ P + T + LL+   + G L +A  L + M    L+P +  YT+L+
Sbjct: 571 FKKMCSSGMLPTLMTYSILLNGLCKHGHLDEALKLFKSMKEKKLEPDIILYTILI 625



 Score =  136 bits (343), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 81/296 (27%), Positives = 148/296 (50%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
            Q G K D   Y T++  L + R      + L +MV  G  PN VTY+ ++H +     L
Sbjct: 365 EQKGCKPDVVAYNTIIDSLCKDRLVNDAMEFLSEMVDRGIPPNAVTYSTILHGFCNLGQL 424

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
           +EA  +FK+M      P+ +T+  L+D   + G +  A  +++ M   G+ P+ +TY+ +
Sbjct: 425 DEATQLFKEMVGRNVMPNTLTFSILVDGLCQEGMVSEARWVFETMTEKGVEPNIYTYNAL 484

Query: 472 INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF 531
           +N       +  A ++F  MV +GC P+L +YNI+I     +R    A  L   M     
Sbjct: 485 MNGYCLRCKMNEARKVFEIMVGKGCAPDLHSYNILINGYCNSRRMDKAKALLTQMSVKKL 544

Query: 532 EPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWE 591
            P+ VTY+ +M+ L + G L +A+ +F +M     +P    Y +L++   K G++ +A +
Sbjct: 545 TPNTVTYNTIMKGLCYVGRLLDAQELFKKMCSSGMLPTLMTYSILLNGLCKHGHLDEALK 604

Query: 592 WYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
            +++M +  L P++     L+      G+L  A  L   +   G++P  +TY +++
Sbjct: 605 LFKSMKEKKLEPDIILYTILIEGMFIGGKLEVAKGLFSKLSADGIQPPGRTYNVMI 660



 Score =  119 bits (298), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 69/232 (29%), Positives = 121/232 (52%)

Query: 362 TYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQM 421
           T++ +V  L +         + + M   G +PN+ TYN L++ Y     +NEA  VF+ M
Sbjct: 445 TFSILVDGLCQEGMVSEARWVFETMTEKGVEPNIYTYNALMNGYCLRCKMNEARKVFEIM 504

Query: 422 QVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHL 481
              GC PD  +Y  LI+ +  +  +D A  +  +M    L+P+T TY+ I+  L   G L
Sbjct: 505 VGKGCAPDLHSYNILINGYCNSRRMDKAKALLTQMSVKKLTPNTVTYNTIMKGLCYVGRL 564

Query: 482 QAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIV 541
             A +LF +M + G +P L+TY+I++    K  +   ALKL++ M+    EPD + Y+I+
Sbjct: 565 LDAQELFKKMCSSGMLPTLMTYSILLNGLCKHGHLDEALKLFKSMKEKKLEPDIILYTIL 624

Query: 542 MEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWY 593
           +E +   G L+ A+ +F+++      P    Y +++    K G   +A+E +
Sbjct: 625 IEGMFIGGKLEVAKGLFSKLSADGIQPPGRTYNVMIKGLLKEGLSDEAYELF 676



 Score =  100 bits (249), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 83/361 (22%), Positives = 163/361 (45%), Gaps = 8/361 (2%)

Query: 411 LNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSV 470
           +++AL  F +M  +   P  V +   +   AK       + +  +M   G++   ++ ++
Sbjct: 74  VDDALASFYRMARMNPRPSIVEFGKFLGSIAKMKQYSTVVYLCNQMDLFGVTHTVYSLNI 133

Query: 471 IINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAG 530
           +INCL +  H+  A  ++ +M   G  P+++T+  +I         + A++LY +M  +G
Sbjct: 134 LINCLCRLNHVDFAVSVWGKMFKLGIQPDVITFTTLINGVCNEGKIKVAVELYNEMVRSG 193

Query: 531 FEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAW 590
            EPD ++Y+ ++  L + G  + A  VF +M +    P+   Y  ++D   K   V  A 
Sbjct: 194 HEPDVISYNTLINGLCNSGNTNMAVHVFKKMEQNGCKPNVVTYNTIIDSLCKDRLVNDAM 253

Query: 591 EWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCC 650
           ++   M+  G+ P+  T NS++     +GQL++A  L + M   G KP + TY +++   
Sbjct: 254 DFLSEMVGRGIPPDAITYNSIVHGLCCLGQLNEATRLFKRMEQNGCKPDVVTYNIIIDSL 313

Query: 651 TEARSPYDMGFCHELMAVSGHPAHMFLLSMPSPGPD--GQNVRDHVGSFLEMMHSEDRES 708
            + R   D       M   G P  +   +    G    GQ + + +  F +M   E +  
Sbjct: 314 YKDRLVNDAADFLSEMVDQGIPPDVVTYTTILHGLCYLGQ-LNEAIRLFKKM---EQKGC 369

Query: 709 KRGLV--DAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAVKEKGMSYWLINLHVMSDGTA 766
           K  +V  + ++D L K  L  +A         + + P+AV    + +   NL  + + T 
Sbjct: 370 KPDVVAYNTIIDSLCKDRLVNDAMEFLSEMVDRGIPPNAVTYSTILHGFCNLGQLDEATQ 429

Query: 767 V 767
           +
Sbjct: 430 L 430



 Score = 99.0 bits (245), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 60/206 (29%), Positives = 106/206 (51%)

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
           + G + + +TY  ++       +     K+ + MV  GC P++ +YN LI+ Y  +  ++
Sbjct: 471 EKGVEPNIYTYNALMNGYCLRCKMNEARKVFEIMVGKGCAPDLHSYNILINGYCNSRRMD 530

Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
           +A  +  QM V    P+ VTY T++      G L  A +++KKM ++G+ P   TYS+++
Sbjct: 531 KAKALLTQMSVKKLTPNTVTYNTIMKGLCYVGRLLDAQELFKKMCSSGMLPTLMTYSILL 590

Query: 473 NCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFE 532
           N L K GHL  A +LF  M  +   P+++ Y I+I         + A  L+  +   G +
Sbjct: 591 NGLCKHGHLDEALKLFKSMKEKKLEPDIILYTILIEGMFIGGKLEVAKGLFSKLSADGIQ 650

Query: 533 PDKVTYSIVMEVLGHCGYLDEAEAVF 558
           P   TY+++++ L   G  DEA  +F
Sbjct: 651 PPGRTYNVMIKGLLKEGLSDEAYELF 676


>gi|297743291|emb|CBI36158.3| unnamed protein product [Vitis vinifera]
          Length = 638

 Score =  178 bits (452), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 118/409 (28%), Positives = 201/409 (49%), Gaps = 15/409 (3%)

Query: 256 LQPSDAKVVECVSERFSKPSREMKIPAGLAPFSRHFASTGNVVESVSRILRQWKWGPLAE 315
           ++ +++++V+    + S P  E++       F R+  S   + E   RIL+ +KWGP AE
Sbjct: 22  IKQTESEIVQMF--KLSSPKDEIQRLPMNQKFPRNNPSVRTLDERFIRILKIFKWGPDAE 79

Query: 316 EALGNTNYSMDAYQANQVLKQLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQ 375
           +AL      +D     +VLK   +  V + FF W  ++  F+HD  TY  ++  L  A  
Sbjct: 80  KALEVLKLKVDHRLVREVLKIDVEIHVKIQFFKWAGKRRNFEHDSTTYMALIHCLDEAGM 139

Query: 376 FGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCT 435
            G + K + +MVR  C       + ++   G+A  +N+AL +F Q++   C+P   TY +
Sbjct: 140 LGEMWKTIQEMVRSTCVIGPADLSEIVKVLGKAKMVNKALSIFYQIKGRKCKPTSNTYNS 199

Query: 436 LIDIHAKAGFLDVAMDMYKKMQAAG-LSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQ 494
           +I +  + G  +   ++Y +M   G   PDT TYS +I   GK G   +A  LF EM   
Sbjct: 200 MILMLMQEGHHEKVHELYNEMCNEGDCLPDTVTYSALIAAFGKLGRDDSAISLFDEMKEN 259

Query: 495 GCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEA 554
           G  P    Y  ++ +  K    + AL L ++M+  G      TY+ +++ +G  G ++EA
Sbjct: 260 GLHPTAKIYTTILGIYFKLGRVEKALGLVQEMKEKGCALTVYTYTELIKGVGKAGKVEEA 319

Query: 555 EAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSA 614
            ++F  M ++   PD  +   L++L GKAG +  A + +E M      PNV T N+++ A
Sbjct: 320 YSIFMNMLKEGCKPDVVLINNLINLLGKAGRLADAIKLFEEMESLQCTPNVVTYNTVIKA 379

Query: 615 -FLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGFC 662
            F    + S+A+   + M   G+ PS  TY++L+            GFC
Sbjct: 380 LFESKARASEAFLWYEKMKENGVVPSSFTYSILID-----------GFC 417



 Score =  152 bits (384), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 93/313 (29%), Positives = 165/313 (52%), Gaps = 4/313 (1%)

Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLI 402
           ALG    ++ + G     +TYT ++  +G+A +      +   M+++GC+P+VV  N LI
Sbjct: 284 ALGLVQEMKEK-GCALTVYTYTELIKGVGKAGKVEEAYSIFMNMLKEGCKPDVVLINNLI 342

Query: 403 HSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLID-IHAKAGFLDVAMDMYKKMQAAGL 461
           +  G+A  L +A+ +F++M+ + C P+ VTY T+I  +         A   Y+KM+  G+
Sbjct: 343 NLLGKAGRLADAIKLFEEMESLQCTPNVVTYNTVIKALFESKARASEAFLWYEKMKENGV 402

Query: 462 SPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALK 521
            P +FTYS++I+   K   ++ A  L  EM  +G  P    Y  +I    KA+ Y++A +
Sbjct: 403 VPSSFTYSILIDGFCKTNRVEKALLLLEEMDEKGFAPCPAAYCSLINALGKAKRYEAANE 462

Query: 522 LYRDM-QNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLW 580
           L++++ +N G+   +V Y+++++ LG CG L EA  +F EM++    PD   Y  L+   
Sbjct: 463 LFQELRENCGYSSARV-YAVMIKHLGKCGRLSEAVDLFNEMKKLGCNPDVYAYNALMSGM 521

Query: 581 GKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSL 640
            + G   +A      M + G  P++ + N +L+ F R G    A  +   M N  +KP +
Sbjct: 522 VRVGMTDEAHSLLRTMEENGCTPDLNSHNIILNGFARTGGPKGAIEMFTRMKNSKIKPDV 581

Query: 641 QTYTLLLSCCTEA 653
            +Y  +L C + A
Sbjct: 582 VSYNTVLGCLSRA 594



 Score =  137 bits (344), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 97/360 (26%), Positives = 171/360 (47%), Gaps = 38/360 (10%)

Query: 326 DAYQANQVLKQLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQ 385
           D  +  +VL + +    AL  F  ++ +   K   +TY +M+ +L +      +++L ++
Sbjct: 161 DLSEIVKVLGKAKMVNKALSIFYQIKGRKC-KPTSNTYNSMILMLMQEGHHEKVHELYNE 219

Query: 386 MVRDG-CQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAG 444
           M  +G C P+ VTY+ LI ++G+    + A+ +F +M+  G  P    Y T++ I+ K G
Sbjct: 220 MCNEGDCLPDTVTYSALIAAFGKLGRDDSAISLFDEMKENGLHPTAKIYTTILGIYFKLG 279

Query: 445 FLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYN 504
            ++ A+ + ++M+  G +   +TY+ +I  +GKAG ++ A+ +F  M+ +GC P++V  N
Sbjct: 280 RVEKALGLVQEMKEKGCALTVYTYTELIKGVGKAGKVEEAYSIFMNMLKEGCKPDVVLIN 339

Query: 505 IMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHC-GYLDEAEAVFAEMRR 563
            +I L  KA     A+KL+ +M++    P+ VTY+ V++ L        EA   + +M+ 
Sbjct: 340 NLINLLGKAGRLADAIKLFEEMESLQCTPNVVTYNTVIKALFESKARASEAFLWYEKMKE 399

Query: 564 KNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAF-------- 615
              VP    Y +L+D + K   V KA    E M + G  P      SL++A         
Sbjct: 400 NGVVPSSFTYSILIDGFCKTNRVEKALLLLEEMDEKGFAPCPAAYCSLINALGKAKRYEA 459

Query: 616 -------LR--------------------VGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
                  LR                     G+LS+A  L   M  LG  P +  Y  L+S
Sbjct: 460 ANELFQELRENCGYSSARVYAVMIKHLGKCGRLSEAVDLFNEMKKLGCNPDVYAYNALMS 519



 Score =  117 bits (293), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 56/194 (28%), Positives = 108/194 (55%)

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
           + GF      Y +++  LG+A+++ A N+L  ++  +    +   Y  +I   G+   L+
Sbjct: 434 EKGFAPCPAAYCSLINALGKAKRYEAANELFQELRENCGYSSARVYAVMIKHLGKCGRLS 493

Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
           EA+D+F +M+ +GC PD   Y  L+    + G  D A  + + M+  G +PD  ++++I+
Sbjct: 494 EAVDLFNEMKKLGCNPDVYAYNALMSGMVRVGMTDEAHSLLRTMEENGCTPDLNSHNIIL 553

Query: 473 NCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFE 532
           N   + G  + A ++F  M N    P++V+YN ++   ++A  ++ A KL ++M + GFE
Sbjct: 554 NGFARTGGPKGAIEMFTRMKNSKIKPDVVSYNTVLGCLSRAGMFEEAAKLMKEMNSKGFE 613

Query: 533 PDKVTYSIVMEVLG 546
            D +TYS ++E +G
Sbjct: 614 YDLITYSSILEAVG 627



 Score =  102 bits (254), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 77/311 (24%), Positives = 131/311 (42%), Gaps = 38/311 (12%)

Query: 346 FFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNR----- 400
           F N L+   G K D      ++ +LG+A +     KL ++M    C PNVVTYN      
Sbjct: 323 FMNMLKE--GCKPDVVLINNLINLLGKAGRLADAIKLFEEMESLQCTPNVVTYNTVIKAL 380

Query: 401 -------------------------------LIHSYGRANYLNEALDVFKQMQVVGCEPD 429
                                          LI  + + N + +AL + ++M   G  P 
Sbjct: 381 FESKARASEAFLWYEKMKENGVVPSSFTYSILIDGFCKTNRVEKALLLLEEMDEKGFAPC 440

Query: 430 RVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFC 489
              YC+LI+   KA   + A +++++++          Y+V+I  LGK G L  A  LF 
Sbjct: 441 PAAYCSLINALGKAKRYEAANELFQELRENCGYSSARVYAVMIKHLGKCGRLSEAVDLFN 500

Query: 490 EMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCG 549
           EM   GC P++  YN +++   +      A  L R M+  G  PD  +++I++      G
Sbjct: 501 EMKKLGCNPDVYAYNALMSGMVRVGMTDEAHSLLRTMEENGCTPDLNSHNIILNGFARTG 560

Query: 550 YLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCN 609
               A  +F  M+     PD   Y  ++    +AG   +A +  + M   G   ++ T +
Sbjct: 561 GPKGAIEMFTRMKNSKIKPDVVSYNTVLGCLSRAGMFEEAAKLMKEMNSKGFEYDLITYS 620

Query: 610 SLLSAFLRVGQ 620
           S+L A  ++ +
Sbjct: 621 SILEAVGKIDE 631



 Score =  102 bits (253), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 68/256 (26%), Positives = 125/256 (48%), Gaps = 5/256 (1%)

Query: 331 NQVLKQL-QDHTVALGFFNWLRR--QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMV 387
           N V+K L +    A   F W  +  + G      TY+ ++    +  +      LL++M 
Sbjct: 374 NTVIKALFESKARASEAFLWYEKMKENGVVPSSFTYSILIDGFCKTNRVEKALLLLEEMD 433

Query: 388 RDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQM-QVVGCEPDRVTYCTLIDIHAKAGFL 446
             G  P    Y  LI++ G+A     A ++F+++ +  G    RV Y  +I    K G L
Sbjct: 434 EKGFAPCPAAYCSLINALGKAKRYEAANELFQELRENCGYSSARV-YAVMIKHLGKCGRL 492

Query: 447 DVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIM 506
             A+D++ +M+  G +PD + Y+ +++ + + G    AH L   M   GC P+L ++NI+
Sbjct: 493 SEAVDLFNEMKKLGCNPDVYAYNALMSGMVRVGMTDEAHSLLRTMEENGCTPDLNSHNII 552

Query: 507 IALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNW 566
           +   A+    + A++++  M+N+  +PD V+Y+ V+  L   G  +EA  +  EM  K +
Sbjct: 553 LNGFARTGGPKGAIEMFTRMKNSKIKPDVVSYNTVLGCLSRAGMFEEAAKLMKEMNSKGF 612

Query: 567 VPDEPVYGLLVDLWGK 582
             D   Y  +++  GK
Sbjct: 613 EYDLITYSSILEAVGK 628


>gi|356498649|ref|XP_003518162.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g06400, mitochondrial-like [Glycine max]
          Length = 1034

 Score =  178 bits (451), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 101/353 (28%), Positives = 188/353 (53%), Gaps = 2/353 (0%)

Query: 297 VVESVSRILRQWKWGPLAEEALGNTNYSMDAYQANQVLKQ-LQDHTVALGFFNWLRRQAG 355
           VV  ++ I+R        EE L N +Y +++   + VLK+  +   +AL  FNWL+ + G
Sbjct: 126 VVSEITEIVRVENDSSSVEERLENLSYGLNSEVFHMVLKRCFKVPQLALRVFNWLKLKDG 185

Query: 356 FKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEAL 415
           F H   TY TM+ I   A++FG + KL+++M   G Q +V T+  +I+ YG+A  ++EAL
Sbjct: 186 FSHTTRTYNTMLHIAREAKEFGLVKKLVEEMDECGIQKDVNTWTIIINHYGKARKISEAL 245

Query: 416 DVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCL 475
             F+ M+  GCEPD V+Y  +I     AG  D+AM+ Y +M    +  D   Y +++NC+
Sbjct: 246 LAFENMKRCGCEPDAVSYGAIICSLCSAGKRDIAMEFYNEMVRKDMVLDVRLYKMVMNCM 305

Query: 476 GKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDK 535
            ++G + A   L  +M+    +P    +  M+     + + + AL+L R++++   + + 
Sbjct: 306 ARSGDIAAVSLLGNDMIRLSVMPEKCVHGCMLKSFCISGSIEEALELIRELKSKDLDLEP 365

Query: 536 VTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEA 595
             Y  ++  L   G + +A  +   M+R++ V D  V+G++++ +    +V +A E ++ 
Sbjct: 366 ENYETLVRGLCKAGRITDALEIVDIMKRRDMV-DGRVHGIIINGYLGRNDVDRALEVFQC 424

Query: 596 MLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
           M ++G  P + T   L+    R+ +  +A  L   ML  G+KP +   T +++
Sbjct: 425 MKESGCVPTISTYTELMLHLFRLDRYEEACMLYDEMLGKGIKPDVVAITAMVA 477



 Score =  141 bits (355), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 100/374 (26%), Positives = 173/374 (46%), Gaps = 7/374 (1%)

Query: 298 VESVSRILRQWKWGPLAEEALGNTNYSMDAYQANQVLKQLQDH-TVALGFFNWLRRQAGF 356
           V  + RIL       L +E L  +          ++L+    H +  L FF+W+ +Q G+
Sbjct: 618 VHEIRRILSSSTDWSLIQEKLEKSTIQFSPELVMEILQSCNMHGSSVLKFFSWIGKQTGY 677

Query: 357 KHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALD 416
           +H   +Y   + I G  + F  +  L  +M R+       T+  +I  YGR      A++
Sbjct: 678 RHTAESYNIAIKIAGCGKDFKHMRSLFFEMRRNSYPITSETWTIMIMVYGRTGLTEMAMN 737

Query: 417 VFKQMQVVGCEPDRVTYCTLIDIHA--KAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
            FK+M+     P R TY  LI      K   +D A+ +Y +M +AG  PD       + C
Sbjct: 738 CFKEMKADDYVPSRSTYKYLIIALCGRKGRKVDDALKIYGEMISAGYVPDKELIETYLGC 797

Query: 475 LGKAGHLQAAHQLFCEMVNQG-CIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEP 533
           L + G +  A +    + N G  +P  ++Y++ I    +A   + AL L+ ++    F  
Sbjct: 798 LCEVGRVLDARRCTDSLQNFGYTVP--LSYSLFIRALCRAGKVEEALALHEEVGEEKFII 855

Query: 534 DKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWY 593
           D++T+  ++  L   G L+EA A    M++    P   V+  L+  + K   V KA E +
Sbjct: 856 DQLTFGSIVHGLLRKGRLEEALAKVDVMKQNGITPTIHVFTSLIVHFFKEKQVEKAIETF 915

Query: 594 EAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSC-CTE 652
           E ML +G  P + T ++L+  ++ VG+  DA+ +   M   G  P  +TY++ L+C C  
Sbjct: 916 EEMLHSGYEPTIVTYSALIRGYMNVGRPIDAWDIFYRMKLKGPFPDFKTYSMFLTCLCKV 975

Query: 653 ARSPYDMGFCHELM 666
            +S   M    E++
Sbjct: 976 GKSEEGMRLISEML 989



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 45/156 (28%), Positives = 83/156 (53%), Gaps = 2/156 (1%)

Query: 353  QAGFKHDEHTYTTMV-GILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
            +  F  D+ T+ ++V G+L + R   A+ K+ D M ++G  P +  +  LI  + +   +
Sbjct: 850  EEKFIIDQLTFGSIVHGLLRKGRLEEALAKV-DVMKQNGITPTIHVFTSLIVHFFKEKQV 908

Query: 412  NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
             +A++ F++M   G EP  VTY  LI  +   G    A D++ +M+  G  PD  TYS+ 
Sbjct: 909  EKAIETFEEMLHSGYEPTIVTYSALIRGYMNVGRPIDAWDIFYRMKLKGPFPDFKTYSMF 968

Query: 472  INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMI 507
            + CL K G  +   +L  EM++ G +P+ + +  ++
Sbjct: 969  LTCLCKVGKSEEGMRLISEMLDSGIVPSTINFRTVV 1004



 Score = 65.1 bits (157), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 56/275 (20%), Positives = 122/275 (44%), Gaps = 36/275 (13%)

Query: 342 VALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRL 401
           +A+ F+N + R+     D   Y  ++  + R+    A++ L + M+R    P    +  +
Sbjct: 278 IAMEFYNEMVRK-DMVLDVRLYKMVMNCMARSGDIAAVSLLGNDMIRLSVMPEKCVHGCM 336

Query: 402 IHSYGRANYLNEALDVFKQMQ--------------VVG-CEPDRVT-YCTLIDIHAKA-- 443
           + S+  +  + EAL++ ++++              V G C+  R+T    ++DI  +   
Sbjct: 337 LKSFCISGSIEEALELIRELKSKDLDLEPENYETLVRGLCKAGRITDALEIVDIMKRRDM 396

Query: 444 -----------GFL-----DVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQL 487
                      G+L     D A+++++ M+ +G  P   TY+ ++  L +    + A  L
Sbjct: 397 VDGRVHGIIINGYLGRNDVDRALEVFQCMKESGCVPTISTYTELMLHLFRLDRYEEACML 456

Query: 488 FCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGH 547
           + EM+ +G  P++V    M+A      +   A K+++ M+  G +P   ++++ ++ L  
Sbjct: 457 YDEMLGKGIKPDVVAITAMVAGHVSQNHISDAWKMFKSMECQGIKPTWKSFAVFIKELCK 516

Query: 548 CGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGK 582
               D+   V  EM+       + V  L++  W K
Sbjct: 517 ASQTDDIVKVLHEMQASKSRIQDKVLDLVIT-WMK 550



 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 94/486 (19%), Positives = 183/486 (37%), Gaps = 98/486 (20%)

Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLI 402
           AL  F  ++ ++G      TYT ++  L R  ++     L D+M+  G +P+VV    ++
Sbjct: 418 ALEVFQCMK-ESGCVPTISTYTELMLHLFRLDRYEEACMLYDEMLGKGIKPDVVAITAMV 476

Query: 403 HSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLS 462
             +   N++++A  +FK M+  G +P   ++   I    KA   D  + +  +MQA+   
Sbjct: 477 AGHVSQNHISDAWKMFKSMECQGIKPTWKSFAVFIKELCKASQTDDIVKVLHEMQASKSR 536

Query: 463 PDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPN---------LVTYNIMIALQAKA 513
                  ++I  +   G L    ++  + V++  I +          V   I +   AK 
Sbjct: 537 IQDKVLDLVITWMKNKGELTVIEKI--QQVHKASILDPEKFKESDKQVPLRIKVEEDAKV 594

Query: 514 ----------------RNY--QSALKLYRDMQNA--------GFEPDKVTYS--IVMEVL 545
                           +NY  Q   ++ R + ++          E   + +S  +VME+L
Sbjct: 595 DQSKTEIDCSLIHPKLKNYSKQDVHEIRRILSSSTDWSLIQEKLEKSTIQFSPELVMEIL 654

Query: 546 GHC------------------GYLDEAE-------------------AVFAEMRRKNWVP 568
             C                  GY   AE                   ++F EMRR ++  
Sbjct: 655 QSCNMHGSSVLKFFSWIGKQTGYRHTAESYNIAIKIAGCGKDFKHMRSLFFEMRRNSYPI 714

Query: 569 DEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFL-RVG-QLSDAYH 626
               + +++ ++G+ G    A   ++ M      P+  T   L+ A   R G ++ DA  
Sbjct: 715 TSETWTIMIMVYGRTGLTEMAMNCFKEMKADDYVPSRSTYKYLIIALCGRKGRKVDDALK 774

Query: 627 LLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGFCHELMAVSGHPA----HMFLLSMPS 682
           +   M++ G  P  +     L C  E     D   C + +   G+       +F+ ++  
Sbjct: 775 IYGEMISAGYVPDKELIETYLGCLCEVGRVLDARRCTDSLQNFGYTVPLSYSLFIRALCR 834

Query: 683 PGPDGQNVRDHVGSFLEMMHSEDRESKRGLVD-----AVVDFLHKSGLKEEAGSVWEVAA 737
            G   + +  H          E+   ++ ++D     ++V  L + G  EEA +  +V  
Sbjct: 835 AGKVEEALALH----------EEVGEEKFIIDQLTFGSIVHGLLRKGRLEEALAKVDVMK 884

Query: 738 QKNVYP 743
           Q  + P
Sbjct: 885 QNGITP 890


>gi|357476703|ref|XP_003608637.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355509692|gb|AES90834.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 715

 Score =  178 bits (451), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 125/536 (23%), Positives = 234/536 (43%), Gaps = 43/536 (8%)

Query: 346 FFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSY 405
           FFNW++ Q     +   Y   +  L   RQFG I +L  QM+  G + + +TY+ +I   
Sbjct: 176 FFNWIKTQNLLPMETIFYNVTMKSLRFGRQFGIIEELAHQMIDGGVELDNITYSTIISCA 235

Query: 406 GRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDT 465
            + N  ++A+  F++M   G  PD VT+  ++D++A+ G ++  ++++++ +A G  PD 
Sbjct: 236 KKCNLFDKAVYWFERMYKTGLMPDEVTFSAILDVYARLGKVEEVVNLFERGRATGWKPDP 295

Query: 466 FTYSVI-----------------------------------INCLGKAGHLQAAHQLFCE 490
            T+SV+                                   +  +GKAG    A  LF E
Sbjct: 296 ITFSVLGKMFGEAGDYDGIRYVLQEMKSLGVQPNLVVYNTLLEAMGKAGKPGFARSLFEE 355

Query: 491 MVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGY 550
           M++ G  PN  T   +I +  KAR  + AL+L++ M+  G+  D + Y+ ++ +    G 
Sbjct: 356 MIDSGIAPNEKTLTAVIKIYGKARWSKDALELWKRMKENGWPMDFILYNTLLNMCADVGL 415

Query: 551 LDEAEAVFAEMRR-KNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCN 609
           ++EAE +F +M++ ++  PD   Y  +++++G  G V KA + +E M + G+  NV  C 
Sbjct: 416 IEEAETLFRDMKQSEHCKPDSWSYTAMLNIYGSEGAVDKAMKLFEEMSKFGIELNVMGCT 475

Query: 610 SLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGFCHELMAVS 669
            L+    +  ++ D   +    +  G+KP  +    LLS  + ++   D       +  +
Sbjct: 476 CLIQCLGKAMEIDDLVKVFDISVERGVKPDDRLCGCLLSVVSLSQGSKDQEKVLACLQRA 535

Query: 670 GHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRESKRGLVDAVVDFLHKSGLKEEA 729
                 F+  +       + V++    F  +M +   E +R   + ++D      L E A
Sbjct: 536 NPKLVAFIQLIVDEETSFETVKEE---FKAIMSNAVVEVRRPFCNCLIDICRNKDLVERA 592

Query: 730 GSVWEVAAQKNVYPDAVKEKGMSYWLINLHVMSDGTAVIALSRTLAWFRKQMLISGVGPS 789
             +  +      YP ++  K    W +++  +S G A+ AL   +    K +      P 
Sbjct: 593 HELLYLGTLYGFYP-SLHNKTQYEWCLDVRTLSVGAALTALEEWMTTLTKIVKREEALPD 651

Query: 790 RIDIVTGWGRRSRVTGTSLVRQAVQELLHMFSFPFFTENGNSGCFVGCGEPLNKWL 845
                TG G      G ++   +    L   + PF       GCF+   E L  W+
Sbjct: 652 LFLAQTGTGAHKFAQGLNI---SFASHLRKLAAPFRQSEDKVGCFIATKEDLISWV 704



 Score = 45.4 bits (106), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 45/184 (24%), Positives = 77/184 (41%), Gaps = 14/184 (7%)

Query: 271 FSKPSREMKIPAGLAPFSRHFASTGNVVESVSRILRQWKWGPLAEEA---LGNTNYSMDA 327
           F++   E  I +G+AP  +        + +V +I  + +W   A E    +    + MD 
Sbjct: 348 FARSLFEEMIDSGIAPNEK-------TLTAVIKIYGKARWSKDALELWKRMKENGWPMDF 400

Query: 328 YQANQVLKQLQDHTV---ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLD 384
              N +L    D  +   A   F  +++    K D  +YT M+ I G         KL +
Sbjct: 401 ILYNTLLNMCADVGLIEEAETLFRDMKQSEHCKPDSWSYTAMLNIYGSEGAVDKAMKLFE 460

Query: 385 QMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEP-DRVTYCTLIDIHAKA 443
           +M + G + NV+    LI   G+A  +++ + VF      G +P DR+  C L  +    
Sbjct: 461 EMSKFGIELNVMGCTCLIQCLGKAMEIDDLVKVFDISVERGVKPDDRLCGCLLSVVSLSQ 520

Query: 444 GFLD 447
           G  D
Sbjct: 521 GSKD 524


>gi|224089372|ref|XP_002308709.1| predicted protein [Populus trichocarpa]
 gi|222854685|gb|EEE92232.1| predicted protein [Populus trichocarpa]
          Length = 1115

 Score =  178 bits (451), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 96/304 (31%), Positives = 170/304 (55%), Gaps = 7/304 (2%)

Query: 347 FNWLRRQAGFKHDEHTYTTM---VGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIH 403
           F+ ++RQ   + +  TY  +   + I G  RQ  +    L++M   G   N  +YN LIH
Sbjct: 147 FDLMQRQI-IRRNVDTYLIIFKSLFIRGGLRQAPSA---LEKMREAGFVLNAYSYNGLIH 202

Query: 404 SYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSP 463
              ++ +  EAL+V+++M   G +P   T+  L+    K   +   M + ++M++ GL P
Sbjct: 203 FLLQSGFCKEALEVYRRMVSEGLKPSLKTFSALMVASGKRRNIKTVMGLLEEMESMGLRP 262

Query: 464 DTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLY 523
           + +TY++ I  LG+ G +  A+++   M + GC P++VTY ++I     AR    A+ L+
Sbjct: 263 NIYTYTICIRVLGRDGKIDEAYRIMKRMDDDGCGPDVVTYTVLIDALCTARKLDDAMCLF 322

Query: 524 RDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKA 583
             M+++  +PDKVTY  +++    CG+LD+ E ++ EM    + PD   + +LV+   KA
Sbjct: 323 TKMKSSSHKPDKVTYVTLLDKFSDCGHLDKVEKIWTEMEADGYAPDVVTFTILVNALCKA 382

Query: 584 GNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTY 643
           G + +A++  + M + G+ PN+ T N+L+S  LR  +L DA  L   M +LG++P+  TY
Sbjct: 383 GRINEAFDLLDTMRKQGVLPNLHTYNTLISGLLRANRLDDALDLFSNMESLGVEPTAYTY 442

Query: 644 TLLL 647
            LL+
Sbjct: 443 ILLI 446



 Score =  176 bits (446), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 97/329 (29%), Positives = 167/329 (50%), Gaps = 35/329 (10%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           G + + +TYT  + +LGR  +     +++ +M  DGC P+VVTY  LI +   A  L++A
Sbjct: 259 GLRPNIYTYTICIRVLGRDGKIDEAYRIMKRMDDDGCGPDVVTYTVLIDALCTARKLDDA 318

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
           + +F +M+    +PD+VTY TL+D  +  G LD    ++ +M+A G +PD  T+++++N 
Sbjct: 319 MCLFTKMKSSSHKPDKVTYVTLLDKFSDCGHLDKVEKIWTEMEADGYAPDVVTFTILVNA 378

Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPD 534
           L KAG +  A  L   M  QG +PNL TYN +I+   +A     AL L+ +M++ G EP 
Sbjct: 379 LCKAGRINEAFDLLDTMRKQGVLPNLHTYNTLISGLLRANRLDDALDLFSNMESLGVEPT 438

Query: 535 KVTYSIVMEVLGHCGY-----------------------------------LDEAEAVFA 559
             TY ++++  G  G+                                   L EA+A+F 
Sbjct: 439 AYTYILLIDYHGKSGHPGKALETFEKMKARGIAPNIVACNASLYSLAEMGRLGEAKAMFN 498

Query: 560 EMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVG 619
           E++     PD   Y +++  + K G V +A +    M +    P+V   NSL+    + G
Sbjct: 499 ELKSSGLAPDSVTYNMMMKCYSKVGQVDEAIKLLSEMSKVQCEPDVIVINSLIDTLYKAG 558

Query: 620 QLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
           ++ +A+ +   M  + L P++ TY +LL+
Sbjct: 559 RVEEAWQMFCRMEEMNLAPTVVTYNILLA 587



 Score =  171 bits (433), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 122/444 (27%), Positives = 197/444 (44%), Gaps = 40/444 (9%)

Query: 305 LRQWKWGPLAEEALGNTNYSMDAYQANQVLKQLQDHTVALGFFNWLRRQA--GFKHDEHT 362
           LRQ    P A E +    + ++AY  N ++  L             RR    G K    T
Sbjct: 175 LRQ---APSALEKMREAGFVLNAYSYNGLIHFLLQSGFCKEALEVYRRMVSEGLKPSLKT 231

Query: 363 YTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQ 422
           ++ ++   G+ R    +  LL++M   G +PN+ TY   I   GR   ++EA  + K+M 
Sbjct: 232 FSALMVASGKRRNIKTVMGLLEEMESMGLRPNIYTYTICIRVLGRDGKIDEAYRIMKRMD 291

Query: 423 VVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQ 482
             GC PD VTY  LID    A  LD AM ++ KM+++   PD  TY  +++     GHL 
Sbjct: 292 DDGCGPDVVTYTVLIDALCTARKLDDAMCLFTKMKSSSHKPDKVTYVTLLDKFSDCGHLD 351

Query: 483 AAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVM 542
              +++ EM   G  P++VT+ I++    KA     A  L   M+  G  P+  TY+ ++
Sbjct: 352 KVEKIWTEMEADGYAPDVVTFTILVNALCKAGRINEAFDLLDTMRKQGVLPNLHTYNTLI 411

Query: 543 EVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLR 602
             L     LD+A  +F+ M      P    Y LL+D  GK+G+  KA E +E M   G+ 
Sbjct: 412 SGLLRANRLDDALDLFSNMESLGVEPTAYTYILLIDYHGKSGHPGKALETFEKMKARGIA 471

Query: 603 PNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGFC 662
           PN+  CN+ L +   +G+L +A  +   + + GL P   TY +++ C ++          
Sbjct: 472 PNIVACNASLYSLAEMGRLGEAKAMFNELKSSGLAPDSVTYNMMMKCYSKV--------- 522

Query: 663 HELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRESKRGLVDAVVDFLHK 722
                                   GQ   D     L  M     E    ++++++D L+K
Sbjct: 523 ------------------------GQ--VDEAIKLLSEMSKVQCEPDVIVINSLIDTLYK 556

Query: 723 SGLKEEAGSVWEVAAQKNVYPDAV 746
           +G  EEA  ++    + N+ P  V
Sbjct: 557 AGRVEEAWQMFCRMEEMNLAPTVV 580



 Score =  171 bits (432), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 96/300 (32%), Positives = 156/300 (52%), Gaps = 1/300 (0%)

Query: 349 WLRRQA-GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGR 407
           W   +A G+  D  T+T +V  L +A +      LLD M + G  PN+ TYN LI    R
Sbjct: 357 WTEMEADGYAPDVVTFTILVNALCKAGRINEAFDLLDTMRKQGVLPNLHTYNTLISGLLR 416

Query: 408 ANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFT 467
           AN L++ALD+F  M+ +G EP   TY  LID H K+G    A++ ++KM+A G++P+   
Sbjct: 417 ANRLDDALDLFSNMESLGVEPTAYTYILLIDYHGKSGHPGKALETFEKMKARGIAPNIVA 476

Query: 468 YSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQ 527
            +  +  L + G L  A  +F E+ + G  P+ VTYN+M+   +K      A+KL  +M 
Sbjct: 477 CNASLYSLAEMGRLGEAKAMFNELKSSGLAPDSVTYNMMMKCYSKVGQVDEAIKLLSEMS 536

Query: 528 NAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVR 587
               EPD +  + +++ L   G ++EA  +F  M   N  P    Y +L+   GK G ++
Sbjct: 537 KVQCEPDVIVINSLIDTLYKAGRVEEAWQMFCRMEEMNLAPTVVTYNILLAGLGKEGQIQ 596

Query: 588 KAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
           KA + +E+M   G  PN  T N+LL    +  ++  A  +   M  +  +P + T+  ++
Sbjct: 597 KAVQLFESMNGHGCSPNTITFNTLLDCLCKNDEVDLALKMFYKMTTMNCRPDVLTFNTII 656



 Score =  168 bits (426), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 92/316 (29%), Positives = 165/316 (52%)

Query: 332  QVLKQLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGC 391
            +VL + +  +VA   F    ++ G K     Y  ++              L ++M   GC
Sbjct: 762  KVLCKHKKTSVARNVFVKFTKELGVKPTLKVYNLLIDGFLEVHNVEVAWNLFEEMKSAGC 821

Query: 392  QPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMD 451
             P+  TYN LI ++G++  +NE  D++ +M   GC+P+ +TY  +I    K+  LD AMD
Sbjct: 822  APDTFTYNSLIDAHGKSGKINELFDLYDEMLTRGCKPNTITYNMVISNLVKSNRLDKAMD 881

Query: 452  MYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQA 511
            +Y  + +   SP   T+  +I+ L K+G L  AH++F  MV+ GC PN   YNI++    
Sbjct: 882  LYYNLVSGDFSPTPCTFGPLIDGLLKSGRLDDAHEMFDGMVHYGCRPNSAIYNILVNGYG 941

Query: 512  KARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEP 571
            K  +  +A + ++ M   G  PD  +Y+I++++L   G +D+A   F ++++    PD  
Sbjct: 942  KLGHVDTACEFFKRMVKEGIRPDLKSYTILVDILCIAGRVDDALHYFEKLKQAGLDPDLV 1001

Query: 572  VYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGM 631
             Y L+++  G++    +A   +  M   G+ P++ T NSL+     VG + +A  + + +
Sbjct: 1002 AYNLMINGLGRSQRTEEALSLFHEMQNRGIVPDLYTYNSLILNLGIVGMIEEAGKIYEEL 1061

Query: 632  LNLGLKPSLQTYTLLL 647
              +GLKP++ TY  L+
Sbjct: 1062 QFIGLKPNVFTYNALI 1077



 Score =  168 bits (426), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 95/311 (30%), Positives = 166/311 (53%), Gaps = 1/311 (0%)

Query: 336  QLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNV 395
            ++ +  VA   F  ++  AG   D  TY +++   G++ +   +  L D+M+  GC+PN 
Sbjct: 802  EVHNVEVAWNLFEEMK-SAGCAPDTFTYNSLIDAHGKSGKINELFDLYDEMLTRGCKPNT 860

Query: 396  VTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKK 455
            +TYN +I +  ++N L++A+D++  +      P   T+  LID   K+G LD A +M+  
Sbjct: 861  ITYNMVISNLVKSNRLDKAMDLYYNLVSGDFSPTPCTFGPLIDGLLKSGRLDDAHEMFDG 920

Query: 456  MQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARN 515
            M   G  P++  Y++++N  GK GH+  A + F  MV +G  P+L +Y I++ +   A  
Sbjct: 921  MVHYGCRPNSAIYNILVNGYGKLGHVDTACEFFKRMVKEGIRPDLKSYTILVDILCIAGR 980

Query: 516  YQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGL 575
               AL  +  ++ AG +PD V Y++++  LG     +EA ++F EM+ +  VPD   Y  
Sbjct: 981  VDDALHYFEKLKQAGLDPDLVAYNLMINGLGRSQRTEEALSLFHEMQNRGIVPDLYTYNS 1040

Query: 576  LVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLG 635
            L+   G  G + +A + YE +   GL+PNV T N+L+  +   G    AY + + M+  G
Sbjct: 1041 LILNLGIVGMIEEAGKIYEELQFIGLKPNVFTYNALIRGYTLSGNSELAYGIYKKMMVGG 1100

Query: 636  LKPSLQTYTLL 646
              P+  T+  L
Sbjct: 1101 CDPNTGTFAQL 1111



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 95/298 (31%), Positives = 157/298 (52%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           + +  K D+ TY T++           + K+  +M  DG  P+VVT+  L+++  +A  +
Sbjct: 326 KSSSHKPDKVTYVTLLDKFSDCGHLDKVEKIWTEMEADGYAPDVVTFTILVNALCKAGRI 385

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
           NEA D+   M+  G  P+  TY TLI    +A  LD A+D++  M++ G+ P  +TY ++
Sbjct: 386 NEAFDLLDTMRKQGVLPNLHTYNTLISGLLRANRLDDALDLFSNMESLGVEPTAYTYILL 445

Query: 472 INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF 531
           I+  GK+GH   A + F +M  +G  PN+V  N  +   A+      A  ++ +++++G 
Sbjct: 446 IDYHGKSGHPGKALETFEKMKARGIAPNIVACNASLYSLAEMGRLGEAKAMFNELKSSGL 505

Query: 532 EPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWE 591
            PD VTY+++M+     G +DEA  + +EM +    PD  V   L+D   KAG V +AW+
Sbjct: 506 APDSVTYNMMMKCYSKVGQVDEAIKLLSEMSKVQCEPDVIVINSLIDTLYKAGRVEEAWQ 565

Query: 592 WYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSC 649
            +  M +  L P V T N LL+   + GQ+  A  L + M   G  P+  T+  LL C
Sbjct: 566 MFCRMEEMNLAPTVVTYNILLAGLGKEGQIQKAVQLFESMNGHGCSPNTITFNTLLDC 623



 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 78/254 (30%), Positives = 143/254 (56%), Gaps = 2/254 (0%)

Query: 414  ALDVF-KQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
            A +VF K  + +G +P    Y  LID   +   ++VA +++++M++AG +PDTFTY+ +I
Sbjct: 773  ARNVFVKFTKELGVKPTLKVYNLLIDGFLEVHNVEVAWNLFEEMKSAGCAPDTFTYNSLI 832

Query: 473  NCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFE 532
            +  GK+G +     L+ EM+ +GC PN +TYN++I+   K+     A+ LY ++ +  F 
Sbjct: 833  DAHGKSGKINELFDLYDEMLTRGCKPNTITYNMVISNLVKSNRLDKAMDLYYNLVSGDFS 892

Query: 533  PDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEW 592
            P   T+  +++ L   G LD+A  +F  M      P+  +Y +LV+ +GK G+V  A E+
Sbjct: 893  PTPCTFGPLIDGLLKSGRLDDAHEMFDGMVHYGCRPNSAIYNILVNGYGKLGHVDTACEF 952

Query: 593  YEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTE 652
            ++ M++ G+RP++ +   L+      G++ DA H  + +   GL P L  Y L+++    
Sbjct: 953  FKRMVKEGIRPDLKSYTILVDILCIAGRVDDALHYFEKLKQAGLDPDLVAYNLMINGLGR 1012

Query: 653  A-RSPYDMGFCHEL 665
            + R+   +   HE+
Sbjct: 1013 SQRTEEALSLFHEM 1026



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 43/131 (32%), Positives = 71/131 (54%), Gaps = 1/131 (0%)

Query: 343  ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLI 402
            AL +F  L+ QAG   D   Y  M+  LGR+++      L  +M   G  P++ TYN LI
Sbjct: 984  ALHYFEKLK-QAGLDPDLVAYNLMINGLGRSQRTEEALSLFHEMQNRGIVPDLYTYNSLI 1042

Query: 403  HSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLS 462
             + G    + EA  +++++Q +G +P+  TY  LI  +  +G  ++A  +YKKM   G  
Sbjct: 1043 LNLGIVGMIEEAGKIYEELQFIGLKPNVFTYNALIRGYTLSGNSELAYGIYKKMMVGGCD 1102

Query: 463  PDTFTYSVIIN 473
            P+T T++ + N
Sbjct: 1103 PNTGTFAQLPN 1113


>gi|225442663|ref|XP_002279821.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g16010-like [Vitis vinifera]
          Length = 725

 Score =  178 bits (451), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 118/409 (28%), Positives = 201/409 (49%), Gaps = 15/409 (3%)

Query: 256 LQPSDAKVVECVSERFSKPSREMKIPAGLAPFSRHFASTGNVVESVSRILRQWKWGPLAE 315
           ++ +++++V+    + S P  E++       F R+  S   + E   RIL+ +KWGP AE
Sbjct: 22  IKQTESEIVQMF--KLSSPKDEIQRLPMNQKFPRNNPSVRTLDERFIRILKIFKWGPDAE 79

Query: 316 EALGNTNYSMDAYQANQVLKQLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQ 375
           +AL      +D     +VLK   +  V + FF W  ++  F+HD  TY  ++  L  A  
Sbjct: 80  KALEVLKLKVDHRLVREVLKIDVEIHVKIQFFKWAGKRRNFEHDSTTYMALIHCLDEAGM 139

Query: 376 FGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCT 435
            G + K + +MVR  C       + ++   G+A  +N+AL +F Q++   C+P   TY +
Sbjct: 140 LGEMWKTIQEMVRSTCVIGPADLSEIVKVLGKAKMVNKALSIFYQIKGRKCKPTSNTYNS 199

Query: 436 LIDIHAKAGFLDVAMDMYKKMQAAG-LSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQ 494
           +I +  + G  +   ++Y +M   G   PDT TYS +I   GK G   +A  LF EM   
Sbjct: 200 MILMLMQEGHHEKVHELYNEMCNEGDCLPDTVTYSALIAAFGKLGRDDSAISLFDEMKEN 259

Query: 495 GCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEA 554
           G  P    Y  ++ +  K    + AL L ++M+  G      TY+ +++ +G  G ++EA
Sbjct: 260 GLHPTAKIYTTILGIYFKLGRVEKALGLVQEMKEKGCALTVYTYTELIKGVGKAGKVEEA 319

Query: 555 EAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSA 614
            ++F  M ++   PD  +   L++L GKAG +  A + +E M      PNV T N+++ A
Sbjct: 320 YSIFMNMLKEGCKPDVVLINNLINLLGKAGRLADAIKLFEEMESLQCTPNVVTYNTVIKA 379

Query: 615 -FLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGFC 662
            F    + S+A+   + M   G+ PS  TY++L+            GFC
Sbjct: 380 LFESKARASEAFLWYEKMKENGVVPSSFTYSILID-----------GFC 417



 Score =  137 bits (345), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 98/387 (25%), Positives = 173/387 (44%), Gaps = 47/387 (12%)

Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLI 402
           ALG    ++ + G     +TYT ++  +G+A +      +   M+++GC+P+VV  N LI
Sbjct: 284 ALGLVQEMK-EKGCALTVYTYTELIKGVGKAGKVEEAYSIFMNMLKEGCKPDVVLINNLI 342

Query: 403 HSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLID-IHAKAGFLDVAMDMYKKMQAAGL 461
           +  G+A  L +A+ +F++M+ + C P+ VTY T+I  +         A   Y+KM+  G+
Sbjct: 343 NLLGKAGRLADAIKLFEEMESLQCTPNVVTYNTVIKALFESKARASEAFLWYEKMKENGV 402

Query: 462 SPDTFTYSVII-----------------------------------NCLGKAGHLQAAHQ 486
            P +FTYS++I                                   N LGKA   +AA++
Sbjct: 403 VPSSFTYSILIDGFCKTNRVEKALLLLEEMDEKGFAPCPAAYCSLINALGKAKRYEAANE 462

Query: 487 LFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLG 546
           LF E+       +   Y +MI    K      A+ L+ +M+  G  PD   Y+ +M  + 
Sbjct: 463 LFQELRENCGYSSARVYAVMIKHLGKCGRLSEAVDLFNEMKKLGCNPDVYAYNALMSGMV 522

Query: 547 HCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVP 606
             G  DEA ++   M      PD   + ++++ + + G  + A E +  M  + ++P+V 
Sbjct: 523 RVGMTDEAHSLLRTMEENGCTPDLNSHNIILNGFARTGGPKGAIEMFTRMKNSKIKPDVV 582

Query: 607 TCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCC---TEARSPYDMGFCH 663
           + N++L    R G   +A  L++ M + G +  L TY+ +L       E  +P      H
Sbjct: 583 SYNTVLGCLSRAGMFEEAAKLMKEMNSKGFEYDLITYSSILEAVGKIDEDHTPAGQTVMH 642

Query: 664 -------ELMAVSGHPAHMFLLSMPSP 683
                   L+   GH +  +LL    P
Sbjct: 643 IVNIKIINLVRREGHVSSEYLLRSTDP 669



 Score =  136 bits (343), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 97/360 (26%), Positives = 171/360 (47%), Gaps = 38/360 (10%)

Query: 326 DAYQANQVLKQLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQ 385
           D  +  +VL + +    AL  F  ++ +   K   +TY +M+ +L +      +++L ++
Sbjct: 161 DLSEIVKVLGKAKMVNKALSIFYQIKGRKC-KPTSNTYNSMILMLMQEGHHEKVHELYNE 219

Query: 386 MVRDG-CQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAG 444
           M  +G C P+ VTY+ LI ++G+    + A+ +F +M+  G  P    Y T++ I+ K G
Sbjct: 220 MCNEGDCLPDTVTYSALIAAFGKLGRDDSAISLFDEMKENGLHPTAKIYTTILGIYFKLG 279

Query: 445 FLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYN 504
            ++ A+ + ++M+  G +   +TY+ +I  +GKAG ++ A+ +F  M+ +GC P++V  N
Sbjct: 280 RVEKALGLVQEMKEKGCALTVYTYTELIKGVGKAGKVEEAYSIFMNMLKEGCKPDVVLIN 339

Query: 505 IMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHC-GYLDEAEAVFAEMRR 563
            +I L  KA     A+KL+ +M++    P+ VTY+ V++ L        EA   + +M+ 
Sbjct: 340 NLINLLGKAGRLADAIKLFEEMESLQCTPNVVTYNTVIKALFESKARASEAFLWYEKMKE 399

Query: 564 KNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAF-------- 615
              VP    Y +L+D + K   V KA    E M + G  P      SL++A         
Sbjct: 400 NGVVPSSFTYSILIDGFCKTNRVEKALLLLEEMDEKGFAPCPAAYCSLINALGKAKRYEA 459

Query: 616 -------LR--------------------VGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
                  LR                     G+LS+A  L   M  LG  P +  Y  L+S
Sbjct: 460 ANELFQELRENCGYSSARVYAVMIKHLGKCGRLSEAVDLFNEMKKLGCNPDVYAYNALMS 519


>gi|297736717|emb|CBI25753.3| unnamed protein product [Vitis vinifera]
          Length = 728

 Score =  178 bits (451), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 135/569 (23%), Positives = 254/569 (44%), Gaps = 27/569 (4%)

Query: 282 AGLAPFSRHFASTGNVVESVSRILRQWKWGPLAEEALGNTNYSMDAYQANQVLKQLQDHT 341
           A L   +    S     E VS++LR           LG+     DA     VL  + +  
Sbjct: 111 ASLVKIAESLDSCEATEEDVSQVLR----------CLGDKILEQDAVI---VLNNMTNPE 157

Query: 342 VALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRL 401
            AL  F + R++     +   Y   + +  + R      KL D+M+  G +P+ +T++ +
Sbjct: 158 TALLAFGFFRKRLKPSREVILYNVTLKVFRKCRNLDRAEKLFDEMLERGVKPDNITFSTI 217

Query: 402 IHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGL 461
           I     ++  N+A++ F++M   GC PD VTY  +ID + +AG +D+A+ +Y + +    
Sbjct: 218 ISCARVSSLPNKAVEWFEKMPEFGCHPDDVTYSAMIDAYGRAGNVDMALKLYDRARTEKW 277

Query: 462 SPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALK 521
             D  T+S +I   G +G+      ++ EM   G  PNLV YN ++    +A+    A  
Sbjct: 278 RIDPVTFSTLIRIYGMSGNFDGCLNVYEEMKALGVKPNLVIYNTLLDAMGRAKRPWQAKN 337

Query: 522 LYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRK---NWVPDEPVYGLLVD 578
           +Y++M N G +P   TY+ ++   G   Y ++A  V+ EM+ K   N +PD   +  L+ 
Sbjct: 338 IYKEMTNNGLQPSWGTYAALLRAYGRARYAEDALIVYKEMKEKGSGNCMPDSWTFSSLIT 397

Query: 579 LWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKP 638
           ++  +G V +A     AML+AG  PN+    SL+  + +  +  +       +L L + P
Sbjct: 398 IYSCSGKVSEAEAMLNAMLEAGFEPNIFVLTSLIQCYGKANRTDEVVRTFDRLLELDITP 457

Query: 639 SLQTYTLLLSCCTEARSPYDMGFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFL 698
             +    +L+  T++    ++G   + +    +P    ++ +     +G+       S  
Sbjct: 458 DDRFCGCMLNVMTQSPKE-ELGKLIDCID-KANPKLGNVVKLLLEEQNGEGTFRKEAS-- 513

Query: 699 EMMHSEDRESKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAVKEKGMSYWLINL 758
           E+  S   + K+   + ++D      L E+A  ++++     +Y D ++ K  + W ++L
Sbjct: 514 ELFDSISADVKKAYCNCLIDLCVNLNLLEKACELFDLGLTLEIYID-IQSKSPTQWSLHL 572

Query: 759 HVMSDGTAVIALSRTLAWFRKQMLISGVGPSRIDIVTGWGRR--SRVTGTSLVRQAVQEL 816
             +S G A+ AL   +    K + +    P+ + I TG G+   S     S+    ++EL
Sbjct: 573 KSLSLGAALTALHIWMNDLSKAVEVGEELPAVLGINTGHGKHKYSDKGLASVFESHLKEL 632

Query: 817 LHMFSFPFFTENGNSGCFVGCGEPLNKWL 845
               + PF       G F+        WL
Sbjct: 633 ----NAPFHEAPDKVGWFLTTKVAATSWL 657


>gi|302759535|ref|XP_002963190.1| hypothetical protein SELMODRAFT_79513 [Selaginella moellendorffii]
 gi|300168458|gb|EFJ35061.1| hypothetical protein SELMODRAFT_79513 [Selaginella moellendorffii]
          Length = 573

 Score =  178 bits (451), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 126/403 (31%), Positives = 191/403 (47%), Gaps = 18/403 (4%)

Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLI 402
           AL  +  +   + +K D  TYT ++    ++       K+L  M    C PNVVTY+ L+
Sbjct: 167 ALKLYKEILTSSSWKPDVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLL 226

Query: 403 HSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLS 462
           H   +A  L++ALD+F++M   GC P+ VTY TLI     A  +D A  +  +M A    
Sbjct: 227 HGLCKAGDLDQALDLFRRMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCP 286

Query: 463 PDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKL 522
           PDT +Y+ +++   + G ++ A QLF EM  + C+P+ +TY  ++     A   + A  L
Sbjct: 287 PDTVSYNALLDGYCRLGRIEEAKQLFKEMATKSCLPDRITYTCLVRGFCNASRLEEARFL 346

Query: 523 YRDMQN-AGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWG 581
             +M+  AG +PD VTYSIV+          EA     EM  +N  P+   Y  L+D   
Sbjct: 347 LENMKTAAGIDPDVVTYSIVVAGYSRAKRFVEAAEFIQEMIARNVAPNAVTYSSLIDGLC 406

Query: 582 KAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQ 641
           KAG V  A E  + M+   + P+V T NS++ A  R+G + +A+ LL  M   GL+P + 
Sbjct: 407 KAGRVDHAMEVLKNMVNKRVEPSVGTFNSVIGALCRLGDMDEAWKLLVAMAAHGLEPGMV 466

Query: 642 TYTLLLSCCTEARSPYDMGFCHELMAVSGH------------PAHMFLLSMPSPGPDGQN 689
           TYT LL   +       M   +EL  V               P   F  S    G     
Sbjct: 467 TYTTLLEGFSRTGR---MEIAYELFEVMRKKAKKSSSAANLVPEQAF--SALIRGLCKAR 521

Query: 690 VRDHVGSFLEMMHSEDRESKRGLVDAVVDFLHKSGLKEEAGSV 732
             D   + +E + S + E       A+VD L ++G  EEAG +
Sbjct: 522 EIDKAMAVVEELRSRECEPAEEDCLAIVDGLLRAGRTEEAGKL 564



 Score =  148 bits (374), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 112/423 (26%), Positives = 207/423 (48%), Gaps = 20/423 (4%)

Query: 329 QANQVLKQLQD-HTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMV 387
           +A +VLK+++D  +VA               D  TY+T++    +  +     ++L +MV
Sbjct: 59  KAYEVLKEMRDGKSVA--------------PDLVTYSTVINGFCKQGEMDRACEILREMV 104

Query: 388 -RDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFL 446
            RDG  P+VVTY  ++    R   ++ A ++ ++M++ G EPD+ T+  LI     A  +
Sbjct: 105 TRDGIAPDVVTYTSVVDGLCRDGKMDRACEMVREMKLKGVEPDKFTFSALITGWCNARKV 164

Query: 447 DVAMDMYKK-MQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNI 505
           D A+ +YK+ + ++   PD  TY+ +I+   K+G+L+ A ++   M  + C+PN+VTY+ 
Sbjct: 165 DEALKLYKEILTSSSWKPDVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSS 224

Query: 506 MIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKN 565
           ++    KA +   AL L+R M + G  P+ VTY+ ++  L     +D A  +  EM    
Sbjct: 225 LLHGLCKAGDLDQALDLFRRMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATC 284

Query: 566 WVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAY 625
             PD   Y  L+D + + G + +A + ++ M      P+  T   L+  F    +L +A 
Sbjct: 285 CPPDTVSYNALLDGYCRLGRIEEAKQLFKEMATKSCLPDRITYTCLVRGFCNASRLEEAR 344

Query: 626 HLLQGMLN-LGLKPSLQTYTLLLSCCTEARSPYDMG-FCHELMAVSGHPAHMFLLSMPSP 683
            LL+ M    G+ P + TY+++++  + A+   +   F  E++A +  P  +   S+   
Sbjct: 345 FLLENMKTAAGIDPDVVTYSIVVAGYSRAKRFVEAAEFIQEMIARNVAPNAVTYSSLIDG 404

Query: 684 GPDGQNVRDHVGSFLEMMHSEDRESKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYP 743
                 V DH    L+ M ++  E   G  ++V+  L + G  +EA  +    A   + P
Sbjct: 405 LCKAGRV-DHAMEVLKNMVNKRVEPSVGTFNSVIGALCRLGDMDEAWKLLVAMAAHGLEP 463

Query: 744 DAV 746
             V
Sbjct: 464 GMV 466



 Score =  133 bits (334), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 84/260 (32%), Positives = 137/260 (52%), Gaps = 4/260 (1%)

Query: 391 CQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAM 450
           CQP VVT+  +I  + +AN L +AL  F++M+     P+  TY  +++   KA     A 
Sbjct: 3   CQPTVVTWTIIIDGFCKANQLKQALACFEKMREF-VAPNERTYNVVVNGLCKARLTSKAY 61

Query: 451 DMYKKMQ-AAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQ-GCIPNLVTYNIMIA 508
           ++ K+M+    ++PD  TYS +IN   K G +  A ++  EMV + G  P++VTY  ++ 
Sbjct: 62  EVLKEMRDGKSVAPDLVTYSTVINGFCKQGEMDRACEILREMVTRDGIAPDVVTYTSVVD 121

Query: 509 LQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAE-MRRKNWV 567
              +      A ++ R+M+  G EPDK T+S ++    +   +DEA  ++ E +   +W 
Sbjct: 122 GLCRDGKMDRACEMVREMKLKGVEPDKFTFSALITGWCNARKVDEALKLYKEILTSSSWK 181

Query: 568 PDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHL 627
           PD   Y  L+D + K+GN+ KA +    M      PNV T +SLL    + G L  A  L
Sbjct: 182 PDVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQALDL 241

Query: 628 LQGMLNLGLKPSLQTYTLLL 647
            + M + G  P++ TYT L+
Sbjct: 242 FRRMTSKGCVPNVVTYTTLI 261



 Score =  125 bits (313), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 87/318 (27%), Positives = 139/318 (43%), Gaps = 43/318 (13%)

Query: 362 TYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQM 421
           TYTT++  L  A +  A   L+D+M    C P+ V+YN L+  Y R   + EA  +FK+M
Sbjct: 256 TYTTLIHGLCAAHKVDAARLLMDEMTATCCPPDTVSYNALLDGYCRLGRIEEAKQLFKEM 315

Query: 422 QVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQ-AAGLSPDTFTYSVIINCLGKAGH 480
               C PDR+TY  L+     A  L+ A  + + M+ AAG+ PD  TYS+++    +A  
Sbjct: 316 ATKSCLPDRITYTCLVRGFCNASRLEEARFLLENMKTAAGIDPDVVTYSIVVAGYSRAKR 375

Query: 481 LQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSI 540
              A +   EM+ +   PN VTY+ +I    KA     A+++ ++M N   EP   T++ 
Sbjct: 376 FVEAAEFIQEMIARNVAPNAVTYSSLIDGLCKAGRVDHAMEVLKNMVNKRVEPSVGTFNS 435

Query: 541 VMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAM---- 596
           V+  L   G +DEA  +   M      P    Y  L++ + + G +  A+E +E M    
Sbjct: 436 VIGALCRLGDMDEAWKLLVAMAAHGLEPGMVTYTTLLEGFSRTGRMEIAYELFEVMRKKA 495

Query: 597 -----------------LQAGL---------------------RPNVPTCNSLLSAFLRV 618
                            L  GL                      P    C +++   LR 
Sbjct: 496 KKSSSAANLVPEQAFSALIRGLCKAREIDKAMAVVEELRSRECEPAEEDCLAIVDGLLRA 555

Query: 619 GQLSDAYHLLQGMLNLGL 636
           G+  +A  L+  +  +GL
Sbjct: 556 GRTEEAGKLINSISKVGL 573



 Score =  119 bits (299), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 102/421 (24%), Positives = 185/421 (43%), Gaps = 40/421 (9%)

Query: 362 TYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQM 421
           T+T ++    +A Q        ++M R+   PN  TYN +++   +A   ++A +V K+M
Sbjct: 9   TWTIIIDGFCKANQLKQALACFEKM-REFVAPNERTYNVVVNGLCKARLTSKAYEVLKEM 67

Query: 422 QV-VGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAA-GLSPDTFTYSVIINCLGKAG 479
           +      PD VTY T+I+   K G +D A ++ ++M    G++PD  TY+ +++ L + G
Sbjct: 68  RDGKSVAPDLVTYSTVINGFCKQGEMDRACEILREMVTRDGIAPDVVTYTSVVDGLCRDG 127

Query: 480 HLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRD-MQNAGFEPDKVTY 538
            +  A ++  EM  +G  P+  T++ +I     AR    ALKLY++ + ++ ++PD VTY
Sbjct: 128 KMDRACEMVREMKLKGVEPDKFTFSALITGWCNARKVDEALKLYKEILTSSSWKPDVVTY 187

Query: 539 SIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQ 598
           + +++     G L++A  +   M  +  VP+   Y  L+    KAG++ +A + +  M  
Sbjct: 188 TALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQALDLFRRMTS 247

Query: 599 AGLRPNV---------------------------PTC--------NSLLSAFLRVGQLSD 623
            G  PNV                            TC        N+LL  + R+G++ +
Sbjct: 248 KGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPPDTVSYNALLDGYCRLGRIEE 307

Query: 624 AYHLLQGMLNLGLKPSLQTYTLLL-SCCTEARSPYDMGFCHELMAVSGHPAHMFLLSMPS 682
           A  L + M      P   TYT L+   C  +R          +   +G    +   S+  
Sbjct: 308 AKQLFKEMATKSCLPDRITYTCLVRGFCNASRLEEARFLLENMKTAAGIDPDVVTYSIVV 367

Query: 683 PGPDGQNVRDHVGSFLEMMHSEDRESKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVY 742
            G            F++ M + +         +++D L K+G  + A  V +    K V 
Sbjct: 368 AGYSRAKRFVEAAEFIQEMIARNVAPNAVTYSSLIDGLCKAGRVDHAMEVLKNMVNKRVE 427

Query: 743 P 743
           P
Sbjct: 428 P 428



 Score = 92.4 bits (228), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 71/252 (28%), Positives = 118/252 (46%), Gaps = 10/252 (3%)

Query: 359 DEHTYTTMVGILGRARQFGAINKLLDQM-VRDGCQPNVVTYNRLIHSYGRANYLNEALDV 417
           D  TYT +V     A +      LL+ M    G  P+VVTY+ ++  Y RA    EA + 
Sbjct: 323 DRITYTCLVRGFCNASRLEEARFLLENMKTAAGIDPDVVTYSIVVAGYSRAKRFVEAAEF 382

Query: 418 FKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGK 477
            ++M      P+ VTY +LID   KAG +D AM++ K M    + P   T++ +I  L +
Sbjct: 383 IQEMIARNVAPNAVTYSSLIDGLCKAGRVDHAMEVLKNMVNKRVEPSVGTFNSVIGALCR 442

Query: 478 AGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQ--------NA 529
            G +  A +L   M   G  P +VTY  ++   ++    + A +L+  M+         A
Sbjct: 443 LGDMDEAWKLLVAMAAHGLEPGMVTYTTLLEGFSRTGRMEIAYELFEVMRKKAKKSSSAA 502

Query: 530 GFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKA 589
              P++  +S ++  L     +D+A AV  E+R +   P E     +VD   +AG   +A
Sbjct: 503 NLVPEQ-AFSALIRGLCKAREIDKAMAVVEELRSRECEPAEEDCLAIVDGLLRAGRTEEA 561

Query: 590 WEWYEAMLQAGL 601
            +   ++ + GL
Sbjct: 562 GKLINSISKVGL 573


>gi|255586139|ref|XP_002533731.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223526356|gb|EEF28650.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 835

 Score =  177 bits (450), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 90/296 (30%), Positives = 156/296 (52%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           R  G   DE T +T++   GR        +    +  +G +P  VTYN L+H +G+A   
Sbjct: 285 RSRGLDFDEFTCSTVLSACGREGLIDEAREFFSGLKSEGYKPGTVTYNALLHVFGKAGIF 344

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
           +EAL V  +M+   C PD VTY  ++  + +AGF +    +   M + G+ P+  TY+ I
Sbjct: 345 SEALSVLSEMEENNCPPDAVTYNEVVAAYVRAGFHEEGAVVIDAMASKGIMPNAVTYTTI 404

Query: 472 INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF 531
           IN  G+ G +  A ++F +M+  GC+PN+ TYN ++ +  K    +  +K+   M+  G 
Sbjct: 405 INAYGRVGDIDKALEMFDQMMELGCVPNVATYNAVLGMLGKKSLSEEMMKILGHMKLNGC 464

Query: 532 EPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWE 591
            P+ +T++ ++ + G  G       VF EM+   + PD   +  L+  +G+ G+   A +
Sbjct: 465 SPNHITWNTMLAMCGKKGMHKYVNQVFREMKNCGFEPDRDTFNTLISAYGRCGSNNDAAK 524

Query: 592 WYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
            +E M++AG  P + T N+LL+A  R G    A  ++  M N G +PS  +Y+L++
Sbjct: 525 MHEEMIKAGFSPCINTYNALLNALARRGDWKAAESVILDMRNKGFRPSETSYSLMV 580



 Score =  160 bits (405), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 98/372 (26%), Positives = 173/372 (46%), Gaps = 71/372 (19%)

Query: 346 FFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSY 405
           FF+ L+ + G+K    TY  ++ + G+A  F     +L +M  + C P+ VTYN ++ +Y
Sbjct: 315 FFSGLKSE-GYKPGTVTYNALLHVFGKAGIFSEALSVLSEMEENNCPPDAVTYNEVVAAY 373

Query: 406 GRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDT 465
            RA +  E   V   M   G  P+ VTY T+I+ + + G +D A++M+ +M   G  P+ 
Sbjct: 374 VRAGFHEEGAVVIDAMASKGIMPNAVTYTTIINAYGRVGDIDKALEMFDQMMELGCVPNV 433

Query: 466 FTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRD 525
            TY+ ++  LGK    +   ++   M   GC PN +T+N M+A+  K   ++   +++R+
Sbjct: 434 ATYNAVLGMLGKKSLSEEMMKILGHMKLNGCSPNHITWNTMLAMCGKKGMHKYVNQVFRE 493

Query: 526 MQNAGFEPDKVTYSIVMEVLGHCGYLDE-------------------------------- 553
           M+N GFEPD+ T++ ++   G CG  ++                                
Sbjct: 494 MKNCGFEPDRDTFNTLISAYGRCGSNNDAAKMHEEMIKAGFSPCINTYNALLNALARRGD 553

Query: 554 ---AEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVR---------------KAW----- 590
              AE+V  +MR K + P E  Y L+V  + K GNV+                +W     
Sbjct: 554 WKAAESVILDMRNKGFRPSETSYSLMVHSYAKGGNVKGIEMIEKSIYDGDIFPSWMLLRT 613

Query: 591 ---------------EWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLG 635
                            ++A+ + G +P++  CNS+LS F +      A+ +L+ + + G
Sbjct: 614 LVLANFKCRSLTGMERAFQALQKHGYKPDLVLCNSMLSIFAKNNMYDRAHEMLRLIHDAG 673

Query: 636 LKPSLQTYTLLL 647
           L+P L T+  L+
Sbjct: 674 LQPDLVTHNSLM 685



 Score =  139 bits (350), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 95/367 (25%), Positives = 154/367 (41%), Gaps = 39/367 (10%)

Query: 343 ALGFFNWLRRQAGF---KHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYN 399
           AL  F W     G    K D H    MV ILGR  Q    +KL D +  D    +V  Y 
Sbjct: 167 ALLLFEWSVLNLGIANEKIDRHAIELMVRILGRESQHTVASKLFDVIPLDDYVLDVRAYT 226

Query: 400 RLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAK----------------- 442
            ++H+Y R    + A+++F++M   G  P  VTY  ++D++ K                 
Sbjct: 227 TILHAYSRTGKYHRAIEIFERMNESGLSPSLVTYNVMLDVYGKMGRSWDKILELLDEMRS 286

Query: 443 -------------------AGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQA 483
                               G +D A + +  +++ G  P T TY+ +++  GKAG    
Sbjct: 287 RGLDFDEFTCSTVLSACGREGLIDEAREFFSGLKSEGYKPGTVTYNALLHVFGKAGIFSE 346

Query: 484 AHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVME 543
           A  +  EM    C P+ VTYN ++A   +A  ++    +   M + G  P+ VTY+ ++ 
Sbjct: 347 ALSVLSEMEENNCPPDAVTYNEVVAAYVRAGFHEEGAVVIDAMASKGIMPNAVTYTTIIN 406

Query: 544 VLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRP 603
             G  G +D+A  +F +M     VP+   Y  ++ + GK     +  +    M   G  P
Sbjct: 407 AYGRVGDIDKALEMFDQMMELGCVPNVATYNAVLGMLGKKSLSEEMMKILGHMKLNGCSP 466

Query: 604 NVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGFCH 663
           N  T N++L+   + G       + + M N G +P   T+  L+S      S  D    H
Sbjct: 467 NHITWNTMLAMCGKKGMHKYVNQVFREMKNCGFEPDRDTFNTLISAYGRCGSNNDAAKMH 526

Query: 664 ELMAVSG 670
           E M  +G
Sbjct: 527 EEMIKAG 533



 Score =  133 bits (334), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 78/297 (26%), Positives = 143/297 (48%), Gaps = 1/297 (0%)

Query: 353 QAGFKHDEHTYTTMVGILGR-ARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           ++G      TY  M+ + G+  R +  I +LLD+M   G   +  T + ++ + GR   +
Sbjct: 250 ESGLSPSLVTYNVMLDVYGKMGRSWDKILELLDEMRSRGLDFDEFTCSTVLSACGREGLI 309

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
           +EA + F  ++  G +P  VTY  L+ +  KAG    A+ +  +M+     PD  TY+ +
Sbjct: 310 DEAREFFSGLKSEGYKPGTVTYNALLHVFGKAGIFSEALSVLSEMEENNCPPDAVTYNEV 369

Query: 472 INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF 531
           +    +AG  +    +   M ++G +PN VTY  +I    +  +   AL+++  M   G 
Sbjct: 370 VAAYVRAGFHEEGAVVIDAMASKGIMPNAVTYTTIINAYGRVGDIDKALEMFDQMMELGC 429

Query: 532 EPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWE 591
            P+  TY+ V+ +LG     +E   +   M+     P+   +  ++ + GK G  +   +
Sbjct: 430 VPNVATYNAVLGMLGKKSLSEEMMKILGHMKLNGCSPNHITWNTMLAMCGKKGMHKYVNQ 489

Query: 592 WYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
            +  M   G  P+  T N+L+SA+ R G  +DA  + + M+  G  P + TY  LL+
Sbjct: 490 VFREMKNCGFEPDRDTFNTLISAYGRCGSNNDAAKMHEEMIKAGFSPCINTYNALLN 546



 Score =  112 bits (279), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 64/287 (22%), Positives = 136/287 (47%)

Query: 362 TYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQM 421
           T+ TM+ + G+      +N++  +M   G +P+  T+N LI +YGR    N+A  + ++M
Sbjct: 470 TWNTMLAMCGKKGMHKYVNQVFREMKNCGFEPDRDTFNTLISAYGRCGSNNDAAKMHEEM 529

Query: 422 QVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHL 481
              G  P   TY  L++  A+ G    A  +   M+  G  P   +YS++++   K G++
Sbjct: 530 IKAGFSPCINTYNALLNALARRGDWKAAESVILDMRNKGFRPSETSYSLMVHSYAKGGNV 589

Query: 482 QAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIV 541
           +    +   + +    P+ +    ++    K R+     + ++ +Q  G++PD V  + +
Sbjct: 590 KGIEMIEKSIYDGDIFPSWMLLRTLVLANFKCRSLTGMERAFQALQKHGYKPDLVLCNSM 649

Query: 542 MEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGL 601
           + +       D A  +   +      PD   +  L+D++ + G+  KA E    +  +G 
Sbjct: 650 LSIFAKNNMYDRAHEMLRLIHDAGLQPDLVTHNSLMDMYARGGDCWKAEEVLRMLQTSGG 709

Query: 602 RPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
           +P++ + N+++  F R G + +   +L  M ++G+ P + TY   +S
Sbjct: 710 KPDLVSYNTVIKGFCRKGLMQEGIRILSEMTSIGVGPCIFTYNTFIS 756



 Score =  100 bits (250), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 81/367 (22%), Positives = 152/367 (41%), Gaps = 71/367 (19%)

Query: 362 TYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQM 421
           TY  ++G+LG+      + K+L  M  +GC PN +T+N ++   G+         VF++M
Sbjct: 435 TYNAVLGMLGKKSLSEEMMKILGHMKLNGCSPNHITWNTMLAMCGKKGMHKYVNQVFREM 494

Query: 422 QVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLS------------------- 462
           +  G EPDR T+ TLI  + + G  + A  M+++M  AG S                   
Sbjct: 495 KNCGFEPDRDTFNTLISAYGRCGSNNDAAKMHEEMIKAGFSPCINTYNALLNALARRGDW 554

Query: 463 ----------------PDTFTYSVIINCLGKAGHLQAAHQL------------------- 487
                           P   +YS++++   K G+++    +                   
Sbjct: 555 KAAESVILDMRNKGFRPSETSYSLMVHSYAKGGNVKGIEMIEKSIYDGDIFPSWMLLRTL 614

Query: 488 ----------------FCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF 531
                           F  +   G  P+LV  N M+++ AK   Y  A ++ R + +AG 
Sbjct: 615 VLANFKCRSLTGMERAFQALQKHGYKPDLVLCNSMLSIFAKNNMYDRAHEMLRLIHDAGL 674

Query: 532 EPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWE 591
           +PD VT++ +M++    G   +AE V   ++     PD   Y  ++  + + G +++   
Sbjct: 675 QPDLVTHNSLMDMYARGGDCWKAEEVLRMLQTSGGKPDLVSYNTVIKGFCRKGLMQEGIR 734

Query: 592 WYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCT 651
               M   G+ P + T N+ +S +   G  ++   ++  M+    +P+  TY ++     
Sbjct: 735 ILSEMTSIGVGPCIFTYNTFISGYAAQGMFTEINDVISYMIVHNCRPNELTYKIVADGYC 794

Query: 652 EARSPYD 658
           +AR  YD
Sbjct: 795 KARR-YD 800



 Score = 85.1 bits (209), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 46/178 (25%), Positives = 86/178 (48%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           ++ G+K D     +M+ I  +   +   +++L  +   G QP++VT+N L+  Y R    
Sbjct: 635 QKHGYKPDLVLCNSMLSIFAKNNMYDRAHEMLRLIHDAGLQPDLVTHNSLMDMYARGGDC 694

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
            +A +V + +Q  G +PD V+Y T+I    + G +   + +  +M + G+ P  FTY+  
Sbjct: 695 WKAEEVLRMLQTSGGKPDLVSYNTVIKGFCRKGLMQEGIRILSEMTSIGVGPCIFTYNTF 754

Query: 472 INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNA 529
           I+     G     + +   M+   C PN +TY I+     KAR Y  A+     +++ 
Sbjct: 755 ISGYAAQGMFTEINDVISYMIVHNCRPNELTYKIVADGYCKARRYDEAIDFVSKIKDV 812



 Score = 79.0 bits (193), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 63/309 (20%), Positives = 124/309 (40%), Gaps = 37/309 (11%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           +  GF+ D  T+ T++   GR        K+ ++M++ G  P + TYN L+++  R    
Sbjct: 495 KNCGFEPDRDTFNTLISAYGRCGSNNDAAKMHEEMIKAGFSPCINTYNALLNALARRGDW 554

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKK---------------- 455
             A  V   M+  G  P   +Y  ++  +AK G +   ++M +K                
Sbjct: 555 KAAESVILDMRNKGFRPSETSYSLMVHSYAKGGNVK-GIEMIEKSIYDGDIFPSWMLLRT 613

Query: 456 --------------------MQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQG 495
                               +Q  G  PD    + +++   K      AH++   + + G
Sbjct: 614 LVLANFKCRSLTGMERAFQALQKHGYKPDLVLCNSMLSIFAKNNMYDRAHEMLRLIHDAG 673

Query: 496 CIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAE 555
             P+LVT+N ++ + A+  +   A ++ R +Q +G +PD V+Y+ V++     G + E  
Sbjct: 674 LQPDLVTHNSLMDMYARGGDCWKAEEVLRMLQTSGGKPDLVSYNTVIKGFCRKGLMQEGI 733

Query: 556 AVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAF 615
            + +EM      P    Y   +  +   G   +  +    M+    RPN  T   +   +
Sbjct: 734 RILSEMTSIGVGPCIFTYNTFISGYAAQGMFTEINDVISYMIVHNCRPNELTYKIVADGY 793

Query: 616 LRVGQLSDA 624
            +  +  +A
Sbjct: 794 CKARRYDEA 802



 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 39/167 (23%), Positives = 69/167 (41%), Gaps = 2/167 (1%)

Query: 314 AEEALGNTNYSMDAYQANQVLKQLQDHTVALGFFNWLR--RQAGFKHDEHTYTTMVGILG 371
           A +AL    Y  D    N +L     + +       LR    AG + D  T+ +++ +  
Sbjct: 630 AFQALQKHGYKPDLVLCNSMLSIFAKNNMYDRAHEMLRLIHDAGLQPDLVTHNSLMDMYA 689

Query: 372 RARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRV 431
           R        ++L  +   G +P++V+YN +I  + R   + E + +  +M  +G  P   
Sbjct: 690 RGGDCWKAEEVLRMLQTSGGKPDLVSYNTVIKGFCRKGLMQEGIRILSEMTSIGVGPCIF 749

Query: 432 TYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKA 478
           TY T I  +A  G      D+   M      P+  TY ++ +   KA
Sbjct: 750 TYNTFISGYAAQGMFTEINDVISYMIVHNCRPNELTYKIVADGYCKA 796



 Score = 55.1 bits (131), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 40/141 (28%), Positives = 59/141 (41%), Gaps = 17/141 (12%)

Query: 326 DAYQANQVLKQLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQ 385
           D ++A +VL+ LQ               +G K D  +Y T++    R        ++L +
Sbjct: 693 DCWKAEEVLRMLQ--------------TSGGKPDLVSYNTVIKGFCRKGLMQEGIRILSE 738

Query: 386 MVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGF 445
           M   G  P + TYN  I  Y       E  DV   M V  C P+ +TY  + D + KA  
Sbjct: 739 MTSIGVGPCIFTYNTFISGYAAQGMFTEINDVISYMIVHNCRPNELTYKIVADGYCKARR 798

Query: 446 LDVAMDMYKKMQAAGLSPDTF 466
            D A+D   K++      DTF
Sbjct: 799 YDEAIDFVSKIKDVD---DTF 816



 Score = 48.5 bits (114), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 63/293 (21%), Positives = 113/293 (38%), Gaps = 53/293 (18%)

Query: 515 NYQSALKLYR-DMQNAGFEPDKV---TYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDE 570
           N++ AL L+   + N G   +K+      +++ +LG       A  +F  +   ++V D 
Sbjct: 163 NWEKALLLFEWSVLNLGIANEKIDRHAIELMVRILGRESQHTVASKLFDVIPLDDYVLDV 222

Query: 571 PVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDA-YHLLQ 629
             Y  ++  + + G   +A E +E M ++GL P++ T N +L  + ++G+  D    LL 
Sbjct: 223 RAYTTILHAYSRTGKYHRAIEIFERMNESGLSPSLVTYNVMLDVYGKMGRSWDKILELLD 282

Query: 630 GMLNLGLKPSLQTYTLLLSCCTEARSPYDMGFCHELMAVSGHPAHMFLLSMPSPGPDGQN 689
            M + GL     T + +LS C                                 G +G  
Sbjct: 283 EMRSRGLDFDEFTCSTVLSAC---------------------------------GREG-- 307

Query: 690 VRDHVGSFLEMMHSEDRESKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAVKEK 749
           + D    F   + SE  +      +A++    K+G+  EA SV     + N  PDAV   
Sbjct: 308 LIDEAREFFSGLKSEGYKPGTVTYNALLHVFGKAGIFSEALSVLSEMEENNCPPDAVTYN 367

Query: 750 GMSYWLINLHVMSDGTAVIALSRTLAWFRKQMLISGVGPSRI---DIVTGWGR 799
            +    +      +G  VI            M   G+ P+ +    I+  +GR
Sbjct: 368 EVVAAYVRAGFHEEGAVVI----------DAMASKGIMPNAVTYTTIINAYGR 410


>gi|15237467|ref|NP_199470.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75180372|sp|Q9LS25.1|PP420_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g46580, chloroplastic; Flags: Precursor
 gi|8885599|dbj|BAA97529.1| unnamed protein product [Arabidopsis thaliana]
 gi|332008017|gb|AED95400.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 711

 Score =  177 bits (450), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 135/558 (24%), Positives = 245/558 (43%), Gaps = 62/558 (11%)

Query: 333 VLKQLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQ 392
           VL  L++      FFNW++ ++ F  +   Y   +  L   RQF  I ++  +MV+DG +
Sbjct: 159 VLNSLREWQKTHTFFNWVKSKSLFPMETIFYNVTMKSLRFGRQFQLIEEMALEMVKDGVE 218

Query: 393 PNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDM 452
            + +TY+ +I    R N  N+A++ F++M   G  PD VTY  ++D+++K+G ++  + +
Sbjct: 219 LDNITYSTIITCAKRCNLYNKAIEWFERMYKTGLMPDEVTYSAILDVYSKSGKVEEVLSL 278

Query: 453 YKKMQAAGLSPDTFTYSVI-----------------------------------INCLGK 477
           Y++  A G  PD   +SV+                                   +  +G+
Sbjct: 279 YERAVATGWKPDAIAFSVLGKMFGEAGDYDGIRYVLQEMKSMDVKPNVVVYNTLLEAMGR 338

Query: 478 AGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVT 537
           AG    A  LF EM+  G  PN  T   ++ +  KAR  + AL+L+ +M+   +  D + 
Sbjct: 339 AGKPGLARSLFNEMLEAGLTPNEKTLTALVKIYGKARWARDALQLWEEMKAKKWPMDFIL 398

Query: 538 YSIVMEVLGHCGYLDEAEAVFAEMRRK-NWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAM 596
           Y+ ++ +    G  +EAE +F +M+      PD   Y  +++++G  G   KA E +E M
Sbjct: 399 YNTLLNMCADIGLEEEAERLFNDMKESVQCRPDNFSYTAMLNIYGSGGKAEKAMELFEEM 458

Query: 597 LQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSP 656
           L+AG++ NV  C  L+    +  ++ D  ++    +  G+KP  +    LLS      S 
Sbjct: 459 LKAGVQVNVMGCTCLVQCLGKAKRIDDVVYVFDLSIKRGVKPDDRLCGCLLSVMALCESS 518

Query: 657 YDMGFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRESKRGLVDAV 716
            D       +  +      F+  +     + + V++    F  ++++   E++R   + +
Sbjct: 519 EDAEKVMACLERANKKLVTFVNLIVDEKTEYETVKEE---FKLVINATQVEARRPFCNCL 575

Query: 717 VDFLHKSGLKEEAGSVWEVAAQKNVYPDAVKEKGMSYWLINLHVMSDGTAVIALS---RT 773
           +D    +   E A  +  +     +YP  +  K +  W +++  +S G A  AL    RT
Sbjct: 576 IDICRGNNRHERAHELLYLGTLFGLYP-GLHNKTIKEWSLDVRSLSVGAAETALEEWMRT 634

Query: 774 LAWFRK------QMLISGVGPSRIDIVTGWGRRSRVTGTSLVRQAVQELLHMFSFPFFTE 827
           LA   K      ++ ++  G       TG  R S+    S         L   S P F +
Sbjct: 635 LANIIKRQEELPELFLAQTG-------TGTHRFSQGLANSFALH-----LQQLSAP-FRQ 681

Query: 828 NGNSGCFVGCGEPLNKWL 845
           +   G FV   E L  WL
Sbjct: 682 SDRPGIFVATKEDLVSWL 699



 Score = 45.1 bits (105), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 32/125 (25%), Positives = 55/125 (44%), Gaps = 4/125 (3%)

Query: 316 EALGNTNYSMDAYQANQVLKQLQD---HTVALGFFNWLRRQAGFKHDEHTYTTMVGILGR 372
           E +    + MD    N +L    D      A   FN ++     + D  +YT M+ I G 
Sbjct: 385 EEMKAKKWPMDFILYNTLLNMCADIGLEEEAERLFNDMKESVQCRPDNFSYTAMLNIYGS 444

Query: 373 ARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEP-DRV 431
             +     +L ++M++ G Q NV+    L+   G+A  +++ + VF      G +P DR+
Sbjct: 445 GGKAEKAMELFEEMLKAGVQVNVMGCTCLVQCLGKAKRIDDVVYVFDLSIKRGVKPDDRL 504

Query: 432 TYCTL 436
             C L
Sbjct: 505 CGCLL 509


>gi|15236546|ref|NP_194913.1| proton gradient regulation 3 [Arabidopsis thaliana]
 gi|75213543|sp|Q9SZ52.1|PP344_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At4g31850, chloroplastic; AltName: Full=Protein PROTON
           GRADIENT REGULATION 3; Flags: Precursor
 gi|4584524|emb|CAB40755.1| putative protein [Arabidopsis thaliana]
 gi|7270088|emb|CAB79903.1| putative protein [Arabidopsis thaliana]
 gi|332660567|gb|AEE85967.1| proton gradient regulation 3 [Arabidopsis thaliana]
          Length = 1112

 Score =  177 bits (450), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 120/443 (27%), Positives = 210/443 (47%), Gaps = 8/443 (1%)

Query: 309 KWGPLAEEALGNTNYSMDAYQANQVLKQLQDHTVALGFFNWLRRQA--GFKHDEHTYTTM 366
           K  P A   +    + ++AY  N ++  L             RR    GF+    TY+++
Sbjct: 170 KQAPYALRKMREFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSL 229

Query: 367 VGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGC 426
           +  LG+ R   ++  LL +M   G +PNV T+   I   GRA  +NEA ++ K+M   GC
Sbjct: 230 MVGLGKRRDIDSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGC 289

Query: 427 EPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQ 486
            PD VTY  LID    A  LD A ++++KM+     PD  TY  +++       L +  Q
Sbjct: 290 GPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQ 349

Query: 487 LFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLG 546
            + EM   G +P++VT+ I++    KA N+  A      M++ G  P+  TY+ ++  L 
Sbjct: 350 FWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLL 409

Query: 547 HCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVP 606
               LD+A  +F  M      P    Y + +D +GK+G+   A E +E M   G+ PN+ 
Sbjct: 410 RVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIV 469

Query: 607 TCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYD-MGFCHEL 665
            CN+ L +  + G+  +A  +  G+ ++GL P   TY +++ C ++     + +    E+
Sbjct: 470 ACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEM 529

Query: 666 MAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRESKRGLV--DAVVDFLHKS 723
           M     P  + + S+ +       V +    F+ M   ++ + K  +V  + ++  L K+
Sbjct: 530 MENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRM---KEMKLKPTVVTYNTLLAGLGKN 586

Query: 724 GLKEEAGSVWEVAAQKNVYPDAV 746
           G  +EA  ++E   QK   P+ +
Sbjct: 587 GKIQEAIELFEGMVQKGCPPNTI 609



 Score =  164 bits (414), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 95/308 (30%), Positives = 158/308 (51%), Gaps = 1/308 (0%)

Query: 359 DEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVF 418
           D  T+T +V  L +A  FG     LD M   G  PN+ TYN LI    R + L++AL++F
Sbjct: 362 DVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELF 421

Query: 419 KQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKA 478
             M+ +G +P   TY   ID + K+G    A++ ++KM+  G++P+    +  +  L KA
Sbjct: 422 GNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKA 481

Query: 479 GHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTY 538
           G  + A Q+F  + + G +P+ VTYN+M+   +K      A+KL  +M   G EPD +  
Sbjct: 482 GRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVV 541

Query: 539 SIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQ 598
           + ++  L     +DEA  +F  M+     P    Y  L+   GK G +++A E +E M+Q
Sbjct: 542 NSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQ 601

Query: 599 AGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTY-TLLLSCCTEARSPY 657
            G  PN  T N+L     +  +++ A  +L  M+++G  P + TY T++       +   
Sbjct: 602 KGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKE 661

Query: 658 DMGFCHEL 665
            M F H++
Sbjct: 662 AMCFFHQM 669



 Score =  159 bits (402), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 91/293 (31%), Positives = 153/293 (52%)

Query: 357 KHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALD 416
           K D  TY T++      R   ++ +   +M +DG  P+VVT+  L+ +  +A    EA D
Sbjct: 325 KPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFD 384

Query: 417 VFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLG 476
               M+  G  P+  TY TLI    +   LD A++++  M++ G+ P  +TY V I+  G
Sbjct: 385 TLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYG 444

Query: 477 KAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKV 536
           K+G   +A + F +M  +G  PN+V  N  +   AKA   + A +++  +++ G  PD V
Sbjct: 445 KSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSV 504

Query: 537 TYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAM 596
           TY+++M+     G +DEA  + +EM      PD  V   L++   KA  V +AW+ +  M
Sbjct: 505 TYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRM 564

Query: 597 LQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSC 649
            +  L+P V T N+LL+   + G++ +A  L +GM+  G  P+  T+  L  C
Sbjct: 565 KEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDC 617



 Score =  157 bits (398), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 102/338 (30%), Positives = 156/338 (46%), Gaps = 37/338 (10%)

Query: 346  FFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSY 405
             F    +  G +    TY  ++G L  A        +  Q+   GC P+V TYN L+ +Y
Sbjct: 771  LFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAY 830

Query: 406  GRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKK-MQAAGLSPD 464
            G++  ++E  +++K+M    CE + +T+  +I    KAG +D A+D+Y   M     SP 
Sbjct: 831  GKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPT 890

Query: 465  TFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYR 524
              TY  +I+ L K+G L  A QLF  M++ GC PN   YNI+I    KA    +A  L++
Sbjct: 891  ACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFK 950

Query: 525  DMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGK-- 582
             M   G  PD  TYS++++ L   G +DE    F E++     PD   Y L+++  GK  
Sbjct: 951  RMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSH 1010

Query: 583  ----------------------------------AGNVRKAWEWYEAMLQAGLRPNVPTC 608
                                              AG V +A + Y  + +AGL PNV T 
Sbjct: 1011 RLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTF 1070

Query: 609  NSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLL 646
            N+L+  +   G+   AY + Q M+  G  P+  TY  L
Sbjct: 1071 NALIRGYSLSGKPEHAYAVYQTMVTGGFSPNTGTYEQL 1108



 Score =  125 bits (315), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 92/354 (25%), Positives = 153/354 (43%), Gaps = 35/354 (9%)

Query: 329 QANQVLKQLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVR 388
           +  + LK   D   +  +F  +       H   T   M+  L    +   +  + D M +
Sbjct: 87  EVTRGLKSFPDTDSSFSYFKSVAGNLNLVHTTETCNYMLEALRVDGKLEEMAYVFDLMQK 146

Query: 389 DGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDV 448
              + +  TY  +  S      L +A    ++M+  G   +  +Y  LI +  K+ F   
Sbjct: 147 RIIKRDTNTYLTIFKSLSVKGGLKQAPYALRKMREFGFVLNAYSYNGLIHLLLKSRFCTE 206

Query: 449 AMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIA 508
           AM++Y++M   G  P   TYS ++  LGK   + +   L  EM   G  PN+ T+ I I 
Sbjct: 207 AMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVYTFTICIR 266

Query: 509 LQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVF---------- 558
           +  +A     A ++ + M + G  PD VTY+++++ L     LD A+ VF          
Sbjct: 267 VLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKP 326

Query: 559 -------------------------AEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWY 593
                                    +EM +   VPD   + +LVD   KAGN  +A++  
Sbjct: 327 DRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTL 386

Query: 594 EAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
           + M   G+ PN+ T N+L+   LRV +L DA  L   M +LG+KP+  TY + +
Sbjct: 387 DVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFI 440



 Score =  124 bits (311), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 74/232 (31%), Positives = 120/232 (51%), Gaps = 1/232 (0%)

Query: 343  ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLI 402
            AL  +  L     F     TY  ++  L ++ +     +L + M+  GC+PN   YN LI
Sbjct: 874  ALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILI 933

Query: 403  HSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLS 462
            + +G+A   + A  +FK+M   G  PD  TY  L+D     G +D  +  +K+++ +GL+
Sbjct: 934  NGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLN 993

Query: 463  PDTFTYSVIINCLGKAGHLQAAHQLFCEM-VNQGCIPNLVTYNIMIALQAKARNYQSALK 521
            PD   Y++IIN LGK+  L+ A  LF EM  ++G  P+L TYN +I     A   + A K
Sbjct: 994  PDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGK 1053

Query: 522  LYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVY 573
            +Y ++Q AG EP+  T++ ++      G  + A AV+  M    + P+   Y
Sbjct: 1054 IYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPNTGTY 1105



 Score =  114 bits (284), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 109/469 (23%), Positives = 193/469 (41%), Gaps = 78/469 (16%)

Query: 353  QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
            Q G   +  T+ T+   L +  +     K+L +M+  GC P+V TYN +I    +   + 
Sbjct: 601  QKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVK 660

Query: 413  EALDVFKQMQVVGCEPDRVTYCTLI----------------------------------- 437
            EA+  F QM+ +   PD VT CTL+                                   
Sbjct: 661  EAMCFFHQMKKL-VYPDFVTLCTLLPGVVKASLIEDAYKIITNFLYNCADQPANLFWEDL 719

Query: 438  --DIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSV-IINCLGKAGHLQAAHQLFCEMVNQ 494
               I A+AG +D A+   +++ A G+  D  +  V II    K  ++  A  LF +    
Sbjct: 720  IGSILAEAG-IDNAVSFSERLVANGICRDGDSILVPIIRYSCKHNNVSGARTLFEKFTKD 778

Query: 495  -GCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDE 553
             G  P L TYN++I    +A   + A  ++  +++ G  PD  TY+ +++  G  G +DE
Sbjct: 779  LGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDE 838

Query: 554  AEAVFAEMRR------------------------------------KNWVPDEPVYGLLV 577
               ++ EM                                      +++ P    YG L+
Sbjct: 839  LFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLI 898

Query: 578  DLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLK 637
            D   K+G + +A + +E ML  G RPN    N L++ F + G+   A  L + M+  G++
Sbjct: 899  DGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVR 958

Query: 638  PSLQTYTLLLSC-CTEARSPYDMGFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGS 696
            P L+TY++L+ C C   R    + +  EL     +P  +    + +       + + +  
Sbjct: 959  PDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVL 1018

Query: 697  FLEMMHSEDRESKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDA 745
            F EM  S          ++++  L  +G+ EEAG ++    +  + P+ 
Sbjct: 1019 FNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNV 1067



 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 71/263 (26%), Positives = 121/263 (46%), Gaps = 10/263 (3%)

Query: 401 LIHSYGRANYLNEALDV----------FKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAM 450
           L+H+    NY+ EAL V          F  MQ    + D  TY T+    +  G L  A 
Sbjct: 114 LVHTTETCNYMLEALRVDGKLEEMAYVFDLMQKRIIKRDTNTYLTIFKSLSVKGGLKQAP 173

Query: 451 DMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQ 510
              +KM+  G   + ++Y+ +I+ L K+     A +++  M+ +G  P+L TY+ ++   
Sbjct: 174 YALRKMREFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGL 233

Query: 511 AKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDE 570
            K R+  S + L ++M+  G +P+  T++I + VLG  G ++EA  +   M  +   PD 
Sbjct: 234 GKRRDIDSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDV 293

Query: 571 PVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQG 630
             Y +L+D    A  +  A E +E M     +P+  T  +LL  F     L         
Sbjct: 294 VTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSE 353

Query: 631 MLNLGLKPSLQTYTLLLSCCTEA 653
           M   G  P + T+T+L+    +A
Sbjct: 354 MEKDGHVPDVVTFTILVDALCKA 376



 Score = 60.5 bits (145), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 39/132 (29%), Positives = 68/132 (51%), Gaps = 2/132 (1%)

Query: 343  ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQM-VRDGCQPNVVTYNRL 401
             L +F  L+ ++G   D   Y  ++  LG++ +      L ++M    G  P++ TYN L
Sbjct: 980  GLHYFKELK-ESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSL 1038

Query: 402  IHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGL 461
            I + G A  + EA  ++ ++Q  G EP+  T+  LI  ++ +G  + A  +Y+ M   G 
Sbjct: 1039 ILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGF 1098

Query: 462  SPDTFTYSVIIN 473
            SP+T TY  + N
Sbjct: 1099 SPNTGTYEQLPN 1110


>gi|255548724|ref|XP_002515418.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223545362|gb|EEF46867.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 1113

 Score =  177 bits (450), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 108/351 (30%), Positives = 172/351 (49%), Gaps = 5/351 (1%)

Query: 305 LRQWKWGPLAEEALGNTNYSMDAYQANQVLKQLQDHTVALGFFNWLRRQA--GFKHDEHT 362
           LRQ    P A   +    + ++AY  N ++  L    +        RR    G K    T
Sbjct: 175 LRQT---PFAFGKMREAGFHLNAYSYNGLIHLLLQSGLCREALEMYRRMVLEGLKPSLKT 231

Query: 363 YTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQ 422
           ++ ++   G+ R    +  LL++M   G +PN+ TY   I   GRA  ++EA  + K+M+
Sbjct: 232 FSALMVATGKRRDTETVKSLLEEMESLGLKPNIYTYTICIRVLGRAGRIDEACRIMKRME 291

Query: 423 VVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQ 482
             GC PD VTY  LID    AG LD AM+++ KM+A+   PD  TY  +++     G L 
Sbjct: 292 DDGCGPDVVTYTVLIDALCTAGKLDDAMELFVKMKASSHKPDRVTYITMLDKFSDCGDLG 351

Query: 483 AAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVM 542
              + + EM   G  P+++T+ I++    KA N   A  L   M+  G  P+  TY+ ++
Sbjct: 352 RVKEFWSEMEADGYAPDVITFTILVNALCKAGNIDEAFHLLDVMRKQGVLPNLHTYNTLI 411

Query: 543 EVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLR 602
             L     LD+A  +F  M     VP    Y L +D +GK+G   KA E +E M   G+ 
Sbjct: 412 SGLLRVNRLDDALDLFNNMETLGVVPTAYTYILFIDFYGKSGRSDKALETFEKMKIRGIA 471

Query: 603 PNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEA 653
           PN+  CN+ L +   +G+L +A  +   + + GL P   TY +++ C ++A
Sbjct: 472 PNIVACNASLYSLAEMGRLREAKVIFNRLKSNGLAPDSVTYNMMMKCYSKA 522



 Score =  161 bits (407), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 95/317 (29%), Positives = 168/317 (52%), Gaps = 2/317 (0%)

Query: 332  QVLKQLQDHTVALGFFNWLRRQAGFKHDEHTYTTMV-GILGRARQFGAINKLLDQMVRDG 390
            +VL + +   VA   F    ++ G K    +Y  ++ G LG      A N L  +M   G
Sbjct: 762  KVLCKHKQALVAQSVFIRFTKELGVKPTLESYNFLIEGFLGVHNDEMAWN-LFTEMKNAG 820

Query: 391  CQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAM 450
            C P+V TYN L+ ++G++  +NE  ++++QM    C+P+ +T+  +I    K+  LD A+
Sbjct: 821  CAPDVFTYNLLLDAHGKSGKINELFELYEQMICSSCKPNTITHNIIIANLVKSNSLDKAL 880

Query: 451  DMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQ 510
            D++  + +   SP   TY  +++ L K+G L+ A +LF EMV+ GC PN   YNI+I   
Sbjct: 881  DLFYDLVSGDFSPTPCTYGPLLDGLLKSGRLEEAKELFEEMVDYGCRPNNAIYNILINGF 940

Query: 511  AKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDE 570
             K  +  +A +L++ M   G  PD  +Y+ ++  L   G +D+A   F ++++     D 
Sbjct: 941  GKTGDVNTACELFKRMVREGIRPDLKSYTSLVGCLCEAGRVDDALHYFEKLKQTGLYLDS 1000

Query: 571  PVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQG 630
              Y L++D  G++  + +A   Y+ M   G+ P++ T NSL+      G +  A  L + 
Sbjct: 1001 IAYNLMIDGLGRSHRIEEALTLYDEMQSRGINPDLFTYNSLILNLGVAGMVEQAGKLYEE 1060

Query: 631  MLNLGLKPSLQTYTLLL 647
            +  +GL+P++ TY  L+
Sbjct: 1061 LQFIGLEPNVFTYNALI 1077



 Score =  157 bits (398), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 91/300 (30%), Positives = 150/300 (50%), Gaps = 1/300 (0%)

Query: 349 WLRRQA-GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGR 407
           W   +A G+  D  T+T +V  L +A        LLD M + G  PN+ TYN LI    R
Sbjct: 357 WSEMEADGYAPDVITFTILVNALCKAGNIDEAFHLLDVMRKQGVLPNLHTYNTLISGLLR 416

Query: 408 ANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFT 467
            N L++ALD+F  M+ +G  P   TY   ID + K+G  D A++ ++KM+  G++P+   
Sbjct: 417 VNRLDDALDLFNNMETLGVVPTAYTYILFIDFYGKSGRSDKALETFEKMKIRGIAPNIVA 476

Query: 468 YSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQ 527
            +  +  L + G L+ A  +F  + + G  P+ VTYN+M+   +KA     A++L  DM 
Sbjct: 477 CNASLYSLAEMGRLREAKVIFNRLKSNGLAPDSVTYNMMMKCYSKAGQVDEAIELLSDMS 536

Query: 528 NAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVR 587
               EPD +  + ++  L   G +DEA  +F  ++     P    Y  L+   GK G V+
Sbjct: 537 ENQCEPDIIVINSLINTLYKAGRVDEAWKMFCRLKDMKLAPTVVTYNTLIAGLGKEGQVQ 596

Query: 588 KAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
           +A E + +M   G  PN  T N++L    +  ++  A  +L  M  +   P + T+  ++
Sbjct: 597 RAMELFASMTGNGCPPNTITFNTILDCLCKNDEVDLALKMLYKMTTMNCMPDVLTFNTII 656



 Score =  151 bits (381), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 87/295 (29%), Positives = 155/295 (52%)

Query: 352  RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
            + AG   D  TY  ++   G++ +   + +L +QM+   C+PN +T+N +I +  ++N L
Sbjct: 817  KNAGCAPDVFTYNLLLDAHGKSGKINELFELYEQMICSSCKPNTITHNIIIANLVKSNSL 876

Query: 412  NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
            ++ALD+F  +      P   TY  L+D   K+G L+ A +++++M   G  P+   Y+++
Sbjct: 877  DKALDLFYDLVSGDFSPTPCTYGPLLDGLLKSGRLEEAKELFEEMVDYGCRPNNAIYNIL 936

Query: 472  INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF 531
            IN  GK G +  A +LF  MV +G  P+L +Y  ++    +A     AL  +  ++  G 
Sbjct: 937  INGFGKTGDVNTACELFKRMVREGIRPDLKSYTSLVGCLCEAGRVDDALHYFEKLKQTGL 996

Query: 532  EPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWE 591
              D + Y+++++ LG    ++EA  ++ EM+ +   PD   Y  L+   G AG V +A +
Sbjct: 997  YLDSIAYNLMIDGLGRSHRIEEALTLYDEMQSRGINPDLFTYNSLILNLGVAGMVEQAGK 1056

Query: 592  WYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLL 646
             YE +   GL PNV T N+L+  +   G    AY + + M+  G  P+  T+  L
Sbjct: 1057 LYEELQFIGLEPNVFTYNALIRGYSMSGNSDSAYAVYKRMMVGGCSPNTGTFAQL 1111



 Score =  149 bits (377), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 125/505 (24%), Positives = 225/505 (44%), Gaps = 42/505 (8%)

Query: 357 KHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALD 416
           K D  TY TM+         G + +   +M  DG  P+V+T+  L+++  +A  ++EA  
Sbjct: 331 KPDRVTYITMLDKFSDCGDLGRVKEFWSEMEADGYAPDVITFTILVNALCKAGNIDEAFH 390

Query: 417 VFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLG 476
           +   M+  G  P+  TY TLI    +   LD A+D++  M+  G+ P  +TY + I+  G
Sbjct: 391 LLDVMRKQGVLPNLHTYNTLISGLLRVNRLDDALDLFNNMETLGVVPTAYTYILFIDFYG 450

Query: 477 KAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKV 536
           K+G    A + F +M  +G  PN+V  N  +   A+    + A  ++  +++ G  PD V
Sbjct: 451 KSGRSDKALETFEKMKIRGIAPNIVACNASLYSLAEMGRLREAKVIFNRLKSNGLAPDSV 510

Query: 537 TYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAM 596
           TY+++M+     G +DEA  + ++M      PD  V   L++   KAG V +AW+ +  +
Sbjct: 511 TYNMMMKCYSKAGQVDEAIELLSDMSENQCEPDIIVINSLINTLYKAGRVDEAWKMFCRL 570

Query: 597 LQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSC-CTEARS 655
               L P V T N+L++   + GQ+  A  L   M   G  P+  T+  +L C C     
Sbjct: 571 KDMKLAPTVVTYNTLIAGLGKEGQVQRAMELFASMTGNGCPPNTITFNTILDCLCKNDEV 630

Query: 656 PYDMGFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEM--MHSEDRESKRGLV 713
              +   +++  ++  P  +   ++       + V D +  F +M  M + D  +   L+
Sbjct: 631 DLALKMLYKMTTMNCMPDVLTFNTIIHGLVIEKRVSDAIWLFHQMKKMLTPDCVTLCTLL 690

Query: 714 DAVVDFLHKSGLKEEAGSVWEVAAQK-NVYPD--------------AVKEKGMSYW--LI 756
             VV    K+GL E+A  + E    +  VY D              A  EK + +   L+
Sbjct: 691 PGVV----KNGLMEDAFKIAEDFVHRLGVYVDRRFWEDLMGGILTQAGTEKTILFGDRLV 746

Query: 757 NLHVMSDGTAVIALSRTLAWFRKQMLISGVGPSRIDIVTGWGRRSRVTGTSLVRQAVQEL 816
              V  DG+ ++ + + L   ++ ++   V          + R ++  G     ++   L
Sbjct: 747 CGRVCKDGSVLMPIIKVLCKHKQALVAQSV----------FIRFTKELGVKPTLESYNFL 796

Query: 817 LHMF--------SFPFFTENGNSGC 833
           +  F        ++  FTE  N+GC
Sbjct: 797 IEGFLGVHNDEMAWNLFTEMKNAGC 821



 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 88/329 (26%), Positives = 154/329 (46%), Gaps = 35/329 (10%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           G K + +TYT  + +LGRA +     +++ +M  DGC P+VVTY  LI +   A  L++A
Sbjct: 259 GLKPNIYTYTICIRVLGRAGRIDEACRIMKRMEDDGCGPDVVTYTVLIDALCTAGKLDDA 318

Query: 415 LDVFKQMQVVGCEPDRVTY-----------------------------------CTLIDI 439
           +++F +M+    +PDRVTY                                     L++ 
Sbjct: 319 MELFVKMKASSHKPDRVTYITMLDKFSDCGDLGRVKEFWSEMEADGYAPDVITFTILVNA 378

Query: 440 HAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPN 499
             KAG +D A  +   M+  G+ P+  TY+ +I+ L +   L  A  LF  M   G +P 
Sbjct: 379 LCKAGNIDEAFHLLDVMRKQGVLPNLHTYNTLISGLLRVNRLDDALDLFNNMETLGVVPT 438

Query: 500 LVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFA 559
             TY + I    K+     AL+ +  M+  G  P+ V  +  +  L   G L EA+ +F 
Sbjct: 439 AYTYILFIDFYGKSGRSDKALETFEKMKIRGIAPNIVACNASLYSLAEMGRLREAKVIFN 498

Query: 560 EMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVG 619
            ++     PD   Y +++  + KAG V +A E    M +    P++   NSL++   + G
Sbjct: 499 RLKSNGLAPDSVTYNMMMKCYSKAGQVDEAIELLSDMSENQCEPDIIVINSLINTLYKAG 558

Query: 620 QLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
           ++ +A+ +   + ++ L P++ TY  L++
Sbjct: 559 RVDEAWKMFCRLKDMKLAPTVVTYNTLIA 587



 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 102/429 (23%), Positives = 186/429 (43%), Gaps = 47/429 (10%)

Query: 324 SMDAYQANQVLKQLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFG----AI 379
           ++ + +   VL  + D T A  +FN +       H   T   M+ IL   R+ G      
Sbjct: 88  ALSSKEVMAVLNSILDPTDAFSYFNSVAEMPFVVHTTETCNHMLEILRIHRRVGDMVVVF 147

Query: 380 NKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDI 439
           N + +Q+++      ++ +  L    G    L +    F +M+  G   +  +Y  LI +
Sbjct: 148 NLMQNQIIKRDLNTYLIIFKGLFIRGG----LRQTPFAFGKMREAGFHLNAYSYNGLIHL 203

Query: 440 HAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPN 499
             ++G    A++MY++M   GL P   T+S ++   GK    +    L  EM + G  PN
Sbjct: 204 LLQSGLCREALEMYRRMVLEGLKPSLKTFSALMVATGKRRDTETVKSLLEEMESLGLKPN 263

Query: 500 LVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFA 559
           + TY I I +  +A     A ++ + M++ G  PD VTY+++++ L   G LD+A  +F 
Sbjct: 264 IYTYTICIRVLGRAGRIDEACRIMKRMEDDGCGPDVVTYTVLIDALCTAGKLDDAMELFV 323

Query: 560 EMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVG 619
           +M+  +  PD   Y  ++D +   G++ +  E++  M   G  P+V T   L++A  + G
Sbjct: 324 KMKASSHKPDRVTYITMLDKFSDCGDLGRVKEFWSEMEADGYAPDVITFTILVNALCKAG 383

Query: 620 QLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYD-MGFCHELMAVSGHP-AHMFL 677
            + +A+HLL  M   G+ P+L TY  L+S         D +   + +  +   P A+ ++
Sbjct: 384 NIDEAFHLLDVMRKQGVLPNLHTYNTLISGLLRVNRLDDALDLFNNMETLGVVPTAYTYI 443

Query: 678 LSMPSPGPDGQNVRDHVGSFLEMMHSEDRESKRGLVDAVVDFLHKSGLKEEAGSVWEVAA 737
           L                                      +DF  KSG  ++A   +E   
Sbjct: 444 L-------------------------------------FIDFYGKSGRSDKALETFEKMK 466

Query: 738 QKNVYPDAV 746
            + + P+ V
Sbjct: 467 IRGIAPNIV 475



 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 73/287 (25%), Positives = 138/287 (48%), Gaps = 4/287 (1%)

Query: 460  GLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSA 519
            G+ P   +Y+ +I       + + A  LF EM N GC P++ TYN+++    K+      
Sbjct: 785  GVKPTLESYNFLIEGFLGVHNDEMAWNLFTEMKNAGCAPDVFTYNLLLDAHGKSGKINEL 844

Query: 520  LKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDL 579
             +LY  M  +  +P+ +T++I++  L     LD+A  +F ++   ++ P    YG L+D 
Sbjct: 845  FELYEQMICSSCKPNTITHNIIIANLVKSNSLDKALDLFYDLVSGDFSPTPCTYGPLLDG 904

Query: 580  WGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPS 639
              K+G + +A E +E M+  G RPN    N L++ F + G ++ A  L + M+  G++P 
Sbjct: 905  LLKSGRLEEAKELFEEMVDYGCRPNNAIYNILINGFGKTGDVNTACELFKRMVREGIRPD 964

Query: 640  LQTYTLLLSCCTEARSPYDMGFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLE 699
            L++YT L+ C  EA    D     E +  +G        ++   G    +  +   +  +
Sbjct: 965  LKSYTSLVGCLCEAGRVDDALHYFEKLKQTGLYLDSIAYNLMIDGLGRSHRIEEALTLYD 1024

Query: 700  MMHSEDRESKRGLVDAVVDFLHKSGLKEEAGSVWE----VAAQKNVY 742
             M S          ++++  L  +G+ E+AG ++E    +  + NV+
Sbjct: 1025 EMQSRGINPDLFTYNSLILNLGVAGMVEQAGKLYEELQFIGLEPNVF 1071



 Score = 78.2 bits (191), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 45/131 (34%), Positives = 72/131 (54%), Gaps = 1/131 (0%)

Query: 343  ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLI 402
            AL +F  L+ Q G   D   Y  M+  LGR+ +      L D+M   G  P++ TYN LI
Sbjct: 984  ALHYFEKLK-QTGLYLDSIAYNLMIDGLGRSHRIEEALTLYDEMQSRGINPDLFTYNSLI 1042

Query: 403  HSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLS 462
             + G A  + +A  +++++Q +G EP+  TY  LI  ++ +G  D A  +YK+M   G S
Sbjct: 1043 LNLGVAGMVEQAGKLYEELQFIGLEPNVFTYNALIRGYSMSGNSDSAYAVYKRMMVGGCS 1102

Query: 463  PDTFTYSVIIN 473
            P+T T++ + N
Sbjct: 1103 PNTGTFAQLPN 1113


>gi|302809105|ref|XP_002986246.1| hypothetical protein SELMODRAFT_123660 [Selaginella moellendorffii]
 gi|300146105|gb|EFJ12777.1| hypothetical protein SELMODRAFT_123660 [Selaginella moellendorffii]
          Length = 725

 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 119/399 (29%), Positives = 201/399 (50%), Gaps = 21/399 (5%)

Query: 359 DEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVF 418
           D  TY TM+  L ++ +     +LL++MV +G  PNV +YN ++H + +AN +  AL + 
Sbjct: 43  DSVTYNTMINGLSKSDRLDDAIRLLEEMVDNGFAPNVFSYNTVLHGFCKANRVENALWLL 102

Query: 419 KQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKA 478
           +QM + GC PD V+Y T+I+   K   +D A  +  KM   G  P+  TY  +++   + 
Sbjct: 103 EQMVMRGCPPDVVSYTTVINGLCKLDQVDEACRVMDKMIQRGCQPNVITYGTLVDGFCRV 162

Query: 479 GHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAG-FEPDKVT 537
           G L  A +L  +M  +G  PN +TYN ++      R   SAL+L+++M+ +G   PD  T
Sbjct: 163 GDLDGAVELVRKMTERGYRPNAITYNNIMHGLCSGRKLDSALQLFKEMEESGSCPPDVFT 222

Query: 538 YSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAML 597
           YS +++ L   G +D+A  +   M  K   P+   Y  L+    KAG + +A    + M 
Sbjct: 223 YSTIVDSLVKSGKVDDACRLVEAMVSKGCSPNVVTYSSLLHGLCKAGKLDEATALLQRMT 282

Query: 598 QAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPY 657
           ++G  PN+ T N+++    ++G++ +AYHLL+ M++ G +P++ TYT+LL    +     
Sbjct: 283 RSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAE 342

Query: 658 DMGFCHELMAVSGHPAHMF----LLSMPSPGPDGQNVRDHVGSFLEMMHSEDRESKRGLV 713
           D     E+M   G+  ++F    LL M          +D V    +++ S     ++G V
Sbjct: 343 DAIGLVEVMVEKGYVPNLFTYNSLLDMFCK-------KDEVERACQLLSS---MIQKGCV 392

Query: 714 DAVVDF------LHKSGLKEEAGSVWEVAAQKNVYPDAV 746
             VV +      L K+    E   + E     N  PD V
Sbjct: 393 PNVVSYNTVIAGLCKATKVHEGVLLLEQMLSNNCVPDIV 431



 Score =  177 bits (448), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 116/380 (30%), Positives = 184/380 (48%), Gaps = 15/380 (3%)

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
           + G+  +  TY +++ +  +  +     +LL  M++ GC PNVV+YN +I    +A  ++
Sbjct: 353 EKGYVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLCKATKVH 412

Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
           E + + +QM    C PD VT+ T+ID   K   +D+A +++  +Q +G +P+  TY+ ++
Sbjct: 413 EGVLLLEQMLSNNCVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQESGCTPNLVTYNSLV 472

Query: 473 NCLGKAGHLQAAHQLFCEMV-NQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF 531
           + L K+     A  L  EM   QGC P+++TYN +I    K++    A KL+  M + G 
Sbjct: 473 HGLCKSRRFDQAEYLLREMTRKQGCSPDIITYNTVIDGLCKSKRVDRAYKLFLQMLSDGL 532

Query: 532 EPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWE 591
            PD VTYSIV+  L    ++DEA  V   M +  + P    YG L+D + K GN+ KA E
Sbjct: 533 APDDVTYSIVISSLCKWRFMDEANNVLELMLKNGFDPGAITYGTLIDGFCKTGNLDKALE 592

Query: 592 WYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCT 651
             + +L  G  P+V T +  +    + G+L  A  LL+ ML  GL P   TY  LL    
Sbjct: 593 ILQLLLSKGSYPDVVTFSIFIDWLSKRGRLRQAGELLETMLRAGLVPDTVTYNTLLKGFC 652

Query: 652 EARSPYDMGFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSED--RESK 709
           +A    D     E+M   G              PD       VG  ++    +D   E  
Sbjct: 653 DASRTEDAVDLFEVMRQCGCE------------PDNATYTTLVGHLVDKKSYKDLLAEVS 700

Query: 710 RGLVDAVVDFLHKSGLKEEA 729
           + +VD      H+   K EA
Sbjct: 701 KSMVDTGFKLNHELSSKLEA 720



 Score =  171 bits (434), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 120/428 (28%), Positives = 191/428 (44%), Gaps = 29/428 (6%)

Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLI 402
           AL  F  +        D  TY+T+V  L ++ +     +L++ MV  GC PNVVTY+ L+
Sbjct: 203 ALQLFKEMEESGSCPPDVFTYSTIVDSLVKSGKVDDACRLVEAMVSKGCSPNVVTYSSLL 262

Query: 403 HSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLS 462
           H   +A  L+EA  + ++M   GC P+ VTY T+ID H K G +D A  + ++M   G  
Sbjct: 263 HGLCKAGKLDEATALLQRMTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQ 322

Query: 463 PDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKL 522
           P+  TY+V+++   K G  + A  L   MV +G +PNL TYN ++ +  K    + A +L
Sbjct: 323 PNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKDEVERACQL 382

Query: 523 YRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGK 582
              M   G  P+ V+Y+ V+  L     + E   +  +M   N VPD   +  ++D   K
Sbjct: 383 LSSMIQKGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQMLSNNCVPDIVTFNTIIDAMCK 442

Query: 583 AGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGML-NLGLKPSLQ 641
              V  A+E +  + ++G  PN+ T NSL+    +  +   A +LL+ M    G  P + 
Sbjct: 443 TYRVDIAYELFNLIQESGCTPNLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQGCSPDII 502

Query: 642 TYTLLLSCCTEARSPYDMGFCHELMAVSGHPAHMFLLSMPSPG--PDGQN---------- 689
           TY  ++            G C          A+   L M S G  PD             
Sbjct: 503 TYNTVID-----------GLCKSKRV---DRAYKLFLQMLSDGLAPDDVTYSIVISSLCK 548

Query: 690 --VRDHVGSFLEMMHSEDRESKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAVK 747
               D   + LE+M     +        ++D   K+G  ++A  + ++   K  YPD V 
Sbjct: 549 WRFMDEANNVLELMLKNGFDPGAITYGTLIDGFCKTGNLDKALEILQLLLSKGSYPDVVT 608

Query: 748 EKGMSYWL 755
                 WL
Sbjct: 609 FSIFIDWL 616



 Score =  170 bits (431), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 93/296 (31%), Positives = 156/296 (52%), Gaps = 1/296 (0%)

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
           Q G + +  TY T+V    R        +L+ +M   G +PN +TYN ++H       L+
Sbjct: 142 QRGCQPNVITYGTLVDGFCRVGDLDGAVELVRKMTERGYRPNAITYNNIMHGLCSGRKLD 201

Query: 413 EALDVFKQMQVVG-CEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
            AL +FK+M+  G C PD  TY T++D   K+G +D A  + + M + G SP+  TYS +
Sbjct: 202 SALQLFKEMEESGSCPPDVFTYSTIVDSLVKSGKVDDACRLVEAMVSKGCSPNVVTYSSL 261

Query: 472 INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF 531
           ++ L KAG L  A  L   M   GC PN+VTYN +I    K      A  L  +M + G 
Sbjct: 262 LHGLCKAGKLDEATALLQRMTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGC 321

Query: 532 EPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWE 591
           +P+ VTY+++++    CG  ++A  +   M  K +VP+   Y  L+D++ K   V +A +
Sbjct: 322 QPNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKDEVERACQ 381

Query: 592 WYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
              +M+Q G  PNV + N++++   +  ++ +   LL+ ML+    P + T+  ++
Sbjct: 382 LLSSMIQKGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQMLSNNCVPDIVTFNTII 437



 Score =  170 bits (430), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 101/294 (34%), Positives = 157/294 (53%), Gaps = 1/294 (0%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           GF  +  +Y T++    +A +      LL+QMV  GC P+VV+Y  +I+   + + ++EA
Sbjct: 74  GFAPNVFSYNTVLHGFCKANRVENALWLLEQMVMRGCPPDVVSYTTVINGLCKLDQVDEA 133

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
             V  +M   GC+P+ +TY TL+D   + G LD A+++ +KM   G  P+  TY+ I++ 
Sbjct: 134 CRVMDKMIQRGCQPNVITYGTLVDGFCRVGDLDGAVELVRKMTERGYRPNAITYNNIMHG 193

Query: 475 LGKAGHLQAAHQLFCEMVNQG-CIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEP 533
           L     L +A QLF EM   G C P++ TY+ ++    K+     A +L   M + G  P
Sbjct: 194 LCSGRKLDSALQLFKEMEESGSCPPDVFTYSTIVDSLVKSGKVDDACRLVEAMVSKGCSP 253

Query: 534 DKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWY 593
           + VTYS ++  L   G LDEA A+   M R    P+   Y  ++D   K G + +A+   
Sbjct: 254 NVVTYSSLLHGLCKAGKLDEATALLQRMTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLL 313

Query: 594 EAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
           E M+  G +PNV T   LL AF + G+  DA  L++ M+  G  P+L TY  LL
Sbjct: 314 EEMVDGGCQPNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNSLL 367



 Score =  142 bits (359), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 98/358 (27%), Positives = 168/358 (46%), Gaps = 3/358 (0%)

Query: 391 CQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAM 450
           C P+ VTYN +I+   +++ L++A+ + ++M   G  P+  +Y T++    KA  ++ A+
Sbjct: 40  CPPDSVTYNTMINGLSKSDRLDDAIRLLEEMVDNGFAPNVFSYNTVLHGFCKANRVENAL 99

Query: 451 DMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQ 510
            + ++M   G  PD  +Y+ +IN L K   +  A ++  +M+ +GC PN++TY  ++   
Sbjct: 100 WLLEQMVMRGCPPDVVSYTTVINGLCKLDQVDEACRVMDKMIQRGCQPNVITYGTLVDGF 159

Query: 511 AKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWV-PD 569
            +  +   A++L R M   G+ P+ +TY+ +M  L     LD A  +F EM       PD
Sbjct: 160 CRVGDLDGAVELVRKMTERGYRPNAITYNNIMHGLCSGRKLDSALQLFKEMEESGSCPPD 219

Query: 570 EPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQ 629
              Y  +VD   K+G V  A    EAM+  G  PNV T +SLL    + G+L +A  LLQ
Sbjct: 220 VFTYSTIVDSLVKSGKVDDACRLVEAMVSKGCSPNVVTYSSLLHGLCKAGKLDEATALLQ 279

Query: 630 GMLNLGLKPSLQTY-TLLLSCCTEARSPYDMGFCHELMAVSGHPAHMFLLSMPSPGPDGQ 688
            M   G  P++ TY T++   C   R         E++     P  +    +        
Sbjct: 280 RMTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCG 339

Query: 689 NVRDHVGSFLEMMHSEDRESKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAV 746
              D +G  +E+M  +         ++++D   K    E A  +     QK   P+ V
Sbjct: 340 KAEDAIG-LVEVMVEKGYVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQKGCVPNVV 396



 Score =  117 bits (293), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 67/198 (33%), Positives = 110/198 (55%), Gaps = 3/198 (1%)

Query: 350 LRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRAN 409
           + R+ G   D  TY T++  L ++++     KL  QM+ DG  P+ VTY+ +I S  +  
Sbjct: 491 MTRKQGCSPDIITYNTVIDGLCKSKRVDRAYKLFLQMLSDGLAPDDVTYSIVISSLCKWR 550

Query: 410 YLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYS 469
           +++EA +V + M   G +P  +TY TLID   K G LD A+++ + + + G  PD  T+S
Sbjct: 551 FMDEANNVLELMLKNGFDPGAITYGTLIDGFCKTGNLDKALEILQLLLSKGSYPDVVTFS 610

Query: 470 VIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNA 529
           + I+ L K G L+ A +L   M+  G +P+ VTYN ++     A   + A+ L+  M+  
Sbjct: 611 IFIDWLSKRGRLRQAGELLETMLRAGLVPDTVTYNTLLKGFCDASRTEDAVDLFEVMRQC 670

Query: 530 GFEPDKVTYSIVMEVLGH 547
           G EPD  TY+    ++GH
Sbjct: 671 GCEPDNATYTT---LVGH 685



 Score = 88.6 bits (218), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 84/351 (23%), Positives = 140/351 (39%), Gaps = 48/351 (13%)

Query: 456 MQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARN 515
           M   GL      +  I+  L  AG    A   F EM ++ C P+ VTYN MI   +K+  
Sbjct: 1   MNRKGLKAHAGVHKSILRGLCDAGQCSDAVLHFREM-SKTCPPDSVTYNTMINGLSKSDR 59

Query: 516 YQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGL 575
              A++L  +M + GF P+  +Y+ V+        ++ A  +  +M  +   PD   Y  
Sbjct: 60  LDDAIRLLEEMVDNGFAPNVFSYNTVLHGFCKANRVENALWLLEQMVMRGCPPDVVSYTT 119

Query: 576 LVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLG 635
           +++   K   V +A    + M+Q G +PNV T  +L+  F RVG L  A  L++ M   G
Sbjct: 120 VINGLCKLDQVDEACRVMDKMIQRGCQPNVITYGTLVDGFCRVGDLDGAVELVRKMTERG 179

Query: 636 LKPSLQTYTLLLSCCTEARSPYDMGFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVG 695
            +P+  TY  ++            G C                        G+ +   + 
Sbjct: 180 YRPNAITYNNIMH-----------GLCS-----------------------GRKLDSALQ 205

Query: 696 SFLEMMHSEDRESKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAVKEKGMSYWL 755
            F EM  S            +VD L KSG  ++A  + E    K   P+ V    + + L
Sbjct: 206 LFKEMEESGSCPPDVFTYSTIVDSLVKSGKVDDACRLVEAMVSKGCSPNVVTYSSLLHGL 265

Query: 756 INLHVMSDGTAVIALSRTLAWFRKQMLISGVGPSRI---DIVTGWGRRSRV 803
                + + TA++          ++M  SG  P+ +    I+ G  +  R+
Sbjct: 266 CKAGKLDEATALL----------QRMTRSGCSPNIVTYNTIIDGHCKLGRI 306


>gi|357499975|ref|XP_003620276.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495291|gb|AES76494.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 590

 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 101/317 (31%), Positives = 159/317 (50%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           GF  D+ +Y T++  L +  +  A   LL ++  +  QPNVV YN +I S  +   +NEA
Sbjct: 185 GFHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMYNTIIDSMCKVKLVNEA 244

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
            D+F +M   G  PD VTY  LI      G L  A+D++ KM    + PD +T+++++N 
Sbjct: 245 FDLFSEMVSKGISPDVVTYSALISGFCILGKLKDAIDLFNKMILENIKPDVYTFNILVNA 304

Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPD 534
             K G ++    +F  M+ QG  PN VTYN ++      +    A  ++  M   G  PD
Sbjct: 305 FCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNPD 364

Query: 535 KVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYE 594
             +YSI++         DEA  +F EM RKN +PD   Y  L+D   K+G +  A +  +
Sbjct: 365 IQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQLVD 424

Query: 595 AMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEAR 654
            M   G+ PN+ T NS+L A  +  Q+  A  LL    + G +P + TY++L+    ++ 
Sbjct: 425 QMHDRGVPPNICTYNSILDALCKTHQVDKAIALLTKFKDKGFQPDISTYSILIKGLCQSG 484

Query: 655 SPYDMGFCHELMAVSGH 671
              D     E + V G+
Sbjct: 485 KLEDARKVFEDLLVKGY 501



 Score =  139 bits (350), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 91/316 (28%), Positives = 154/316 (48%), Gaps = 6/316 (1%)

Query: 333 VLKQLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQ 392
           +L +L+D   A+  FN +  +   K D +T+  +V    +  +      + D M++ G +
Sbjct: 272 ILGKLKD---AIDLFNKMILE-NIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIK 327

Query: 393 PNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDM 452
           PN VTYN L+  Y     +N+A  +F  M   G  PD  +Y  +I+   K    D AM++
Sbjct: 328 PNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNL 387

Query: 453 YKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAK 512
           +K+M    + PD  TYS +I+ L K+G +  A QL  +M ++G  PN+ TYN ++    K
Sbjct: 388 FKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQLVDQMHDRGVPPNICTYNSILDALCK 447

Query: 513 ARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPV 572
                 A+ L    ++ GF+PD  TYSI+++ L   G L++A  VF ++  K +  D   
Sbjct: 448 THQVDKAIALLTKFKDKGFQPDISTYSILIKGLCQSGKLEDARKVFEDLLVKGYNLDVYA 507

Query: 573 YGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGML 632
           Y +++  +   G   +A      M   G  P+  T   ++ +  +  +   A  LL+ M+
Sbjct: 508 YTIMIQGFCVEGLFNEALALLSKMEDNGCIPDAKTYEIIILSLFKKDENDMAEKLLREMI 567

Query: 633 NLGLKPSLQTYTLLLS 648
             GL   L  Y L L+
Sbjct: 568 ARGL--PLNFYDLYLT 581



 Score =  132 bits (332), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 83/306 (27%), Positives = 152/306 (49%), Gaps = 1/306 (0%)

Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLI 402
           A+  FN L R+         +  ++G L +++ +  +  L  +M   G +PN+V  N LI
Sbjct: 69  AVSLFNRLLRRNT-TPPAFEFNKILGSLVKSKHYHTVLYLSQKMEFRGIKPNLVNCNILI 127

Query: 403 HSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLS 462
           + + +   +  A  VF ++  +G  PD +T+ TL       G +  A   + K+ A G  
Sbjct: 128 NCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLSKGLCLKGQIQQAFLFHDKVVALGFH 187

Query: 463 PDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKL 522
            D  +Y  +I+ L K G  +AA  L   +      PN+V YN +I    K +    A  L
Sbjct: 188 FDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMYNTIIDSMCKVKLVNEAFDL 247

Query: 523 YRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGK 582
           + +M + G  PD VTYS ++      G L +A  +F +M  +N  PD   + +LV+ + K
Sbjct: 248 FSEMVSKGISPDVVTYSALISGFCILGKLKDAIDLFNKMILENIKPDVYTFNILVNAFCK 307

Query: 583 AGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQT 642
            G +++    ++ M++ G++PN  T NSL+  +  V +++ A  +   M   G+ P +Q+
Sbjct: 308 DGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNPDIQS 367

Query: 643 YTLLLS 648
           Y+++++
Sbjct: 368 YSIMIN 373



 Score = 92.8 bits (229), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 60/275 (21%), Positives = 131/275 (47%), Gaps = 12/275 (4%)

Query: 394 NVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMY 453
           N ++Y+    ++   N +++A+ +F ++      P    +  ++    K+      + + 
Sbjct: 49  NFISYSSTSTTFHSNNDVDDAVSLFNRLLRRNTTPPAFEFNKILGSLVKSKHYHTVLYLS 108

Query: 454 KKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKA 513
           +KM+  G+ P+    +++INC  + G +  A  +F +++  G +P+ +T+  +       
Sbjct: 109 QKMEFRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLSKGLCLK 168

Query: 514 RNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRR--KNWV-PDE 570
              Q A   +  +   GF  D+++Y  ++  L   G   E  A    ++R   N V P+ 
Sbjct: 169 GQIQQAFLFHDKVVALGFHFDQISYGTLIHGLCKVG---ETRAALDLLQRVDGNLVQPNV 225

Query: 571 PVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQG 630
            +Y  ++D   K   V +A++ +  M+  G+ P+V T ++L+S F  +G+L DA  L   
Sbjct: 226 VMYNTIIDSMCKVKLVNEAFDLFSEMVSKGISPDVVTYSALISGFCILGKLKDAIDLFNK 285

Query: 631 MLNLGLKPSLQTYTLLLSC------CTEARSPYDM 659
           M+   +KP + T+ +L++         E ++ +DM
Sbjct: 286 MILENIKPDVYTFNILVNAFCKDGKMKEGKTVFDM 320


>gi|357167759|ref|XP_003581319.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g09680-like [Brachypodium distachyon]
          Length = 554

 Score =  177 bits (448), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 97/312 (31%), Positives = 163/312 (52%), Gaps = 2/312 (0%)

Query: 336 QLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNV 395
           +L +   A   F+ +RR    +    T+ T++  + RAR   A++ L  +M   G +P+V
Sbjct: 198 RLGELVSARKVFDEMRRSV--QPTVVTFNTLISGMCRARDLDAVDGLYKEMSDVGVKPDV 255

Query: 396 VTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKK 455
            TY  LI  + R   +  A+ +F +M+  G  P+ V + TLID H K G ++  MD+Y+ 
Sbjct: 256 YTYGALIKGFCRTGRMENAVKMFNEMRDTGVNPNAVVFTTLIDAHCKEGNVNAGMDLYQD 315

Query: 456 MQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARN 515
           M+  G+ PD   Y+ ++N L +A +L+AA  +  EM N G  P+ VTY  +I    K   
Sbjct: 316 MRVRGVMPDLVAYNALVNGLCRARNLKAAESIVEEMKNAGLKPDKVTYTTLIDGCCKDGK 375

Query: 516 YQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGL 575
              A+ + + M       D+VTY+ ++  L   G   +AE V  EM      PD   Y +
Sbjct: 376 LDMAMDIKQKMAEKEVSLDEVTYTALISGLSKAGRPVDAERVLREMMEAALEPDNTTYTM 435

Query: 576 LVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLG 635
           ++D + + G+V+  ++  + M   G +P V T N +++   ++GQ+ +A  LL  MLN+G
Sbjct: 436 VIDAFCRKGDVKTGFKLLKEMQNKGKKPGVVTYNVIMNGLCKLGQMKNADMLLHAMLNIG 495

Query: 636 LKPSLQTYTLLL 647
           + P   TY +LL
Sbjct: 496 VSPDDITYNILL 507



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 120/428 (28%), Positives = 204/428 (47%), Gaps = 32/428 (7%)

Query: 291 FASTGNVVESVSRILRQWKWGPLAEEALGNTNYSMDAYQANQVLKQLQDHTVALGFFNWL 350
           +A  G + ++ S +L   + G            S+ A   + ++ +L     A  F+  L
Sbjct: 129 YADEGLLPDACSLVLLALRRG-----------ISLPAPVCSGLMSRLPSTPEAYTFYLQL 177

Query: 351 RRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANY 410
              AG   +   +  ++    R  +  +  K+ D+M R   QP VVT+N LI    RA  
Sbjct: 178 L-DAGMAPETRLFNVLMRDFVRLGELVSARKVFDEM-RRSVQPTVVTFNTLISGMCRARD 235

Query: 411 LNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSV 470
           L+    ++K+M  VG +PD  TY  LI    + G ++ A+ M+ +M+  G++P+   ++ 
Sbjct: 236 LDAVDGLYKEMSDVGVKPDVYTYGALIKGFCRTGRMENAVKMFNEMRDTGVNPNAVVFTT 295

Query: 471 IINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAG 530
           +I+   K G++ A   L+ +M  +G +P+LV YN ++    +ARN ++A  +  +M+NAG
Sbjct: 296 LIDAHCKEGNVNAGMDLYQDMRVRGVMPDLVAYNALVNGLCRARNLKAAESIVEEMKNAG 355

Query: 531 FEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAW 590
            +PDKVTY+ +++     G LD A  +  +M  K    DE  Y  L+    KAG    A 
Sbjct: 356 LKPDKVTYTTLIDGCCKDGKLDMAMDIKQKMAEKEVSLDEVTYTALISGLSKAGRPVDAE 415

Query: 591 EWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS-- 648
                M++A L P+  T   ++ AF R G +   + LL+ M N G KP + TY ++++  
Sbjct: 416 RVLREMMEAALEPDNTTYTMVIDAFCRKGDVKTGFKLLKEMQNKGKKPGVVTYNVIMNGL 475

Query: 649 CCTEARSPYDMGFCHELMAVSGHP---AHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSED 705
           C        DM   H ++ +   P    +  LL       DGQ     V       +SE+
Sbjct: 476 CKLGQMKNADM-LLHAMLNIGVSPDDITYNILL-------DGQCKHGKVA------NSEE 521

Query: 706 RESKRGLV 713
            ES +G+V
Sbjct: 522 LESSKGMV 529



 Score =  135 bits (339), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 85/275 (30%), Positives = 137/275 (49%), Gaps = 4/275 (1%)

Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLI 402
           A+  FN +R   G   +   +TT++    +     A   L   M   G  P++V YN L+
Sbjct: 274 AVKMFNEMR-DTGVNPNAVVFTTLIDAHCKEGNVNAGMDLYQDMRVRGVMPDLVAYNALV 332

Query: 403 HSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLS 462
           +   RA  L  A  + ++M+  G +PD+VTY TLID   K G LD+AMD+ +KM    +S
Sbjct: 333 NGLCRARNLKAAESIVEEMKNAGLKPDKVTYTTLIDGCCKDGKLDMAMDIKQKMAEKEVS 392

Query: 463 PDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKL 522
            D  TY+ +I+ L KAG    A ++  EM+     P+  TY ++I    +  + ++  KL
Sbjct: 393 LDEVTYTALISGLSKAGRPVDAERVLREMMEAALEPDNTTYTMVIDAFCRKGDVKTGFKL 452

Query: 523 YRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGK 582
            ++MQN G +P  VTY+++M  L   G +  A+ +   M      PD+  Y +L+D   K
Sbjct: 453 LKEMQNKGKKPGVVTYNVIMNGLCKLGQMKNADMLLHAMLNIGVSPDDITYNILLDGQCK 512

Query: 583 AGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLR 617
            G V  + E   +    G+ P+     SL+S   +
Sbjct: 513 HGKVANSEELESS---KGMVPDFAVYTSLISELAK 544



 Score =  114 bits (285), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 81/264 (30%), Positives = 122/264 (46%), Gaps = 23/264 (8%)

Query: 319 GNTNYSMDAYQANQVLKQLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGA 378
           GN N  MD YQ  +V                     G   D   Y  +V  L RAR   A
Sbjct: 304 GNVNAGMDLYQDMRV--------------------RGVMPDLVAYNALVNGLCRARNLKA 343

Query: 379 INKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLID 438
              ++++M   G +P+ VTY  LI    +   L+ A+D+ ++M       D VTY  LI 
Sbjct: 344 AESIVEEMKNAGLKPDKVTYTTLIDGCCKDGKLDMAMDIKQKMAEKEVSLDEVTYTALIS 403

Query: 439 IHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIP 498
             +KAG    A  + ++M  A L PD  TY+++I+   + G ++   +L  EM N+G  P
Sbjct: 404 GLSKAGRPVDAERVLREMMEAALEPDNTTYTMVIDAFCRKGDVKTGFKLLKEMQNKGKKP 463

Query: 499 NLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVF 558
            +VTYN+++    K    ++A  L   M N G  PD +TY+I+++  G C +   A +  
Sbjct: 464 GVVTYNVIMNGLCKLGQMKNADMLLHAMLNIGVSPDDITYNILLD--GQCKHGKVANSEE 521

Query: 559 AEMRRKNWVPDEPVYGLLVDLWGK 582
            E   K  VPD  VY  L+    K
Sbjct: 522 LE-SSKGMVPDFAVYTSLISELAK 544


>gi|357162065|ref|XP_003579293.1| PREDICTED: pentatricopeptide repeat-containing protein At2g31400,
           chloroplastic-like [Brachypodium distachyon]
          Length = 858

 Score =  177 bits (448), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 129/515 (25%), Positives = 236/515 (45%), Gaps = 25/515 (4%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           G   D +TY T +  + +        ++L  M     +PNVVTY+ LI  Y +    +EA
Sbjct: 334 GIGRDIYTYNTFIDAICKCGNIELAMQVLLDMEAKNVKPNVVTYSTLIDGYSKLEKYDEA 393

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
           L ++++M+ +G + DRV Y T++ I+ KAG       +  +M+ +G+  DT TY+ +IN 
Sbjct: 394 LKLYEKMKSLGIQLDRVCYNTVLAIYVKAGKYGEIAIVCDEMEDSGIEKDTVTYNSLING 453

Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPD 534
            GK G L     L  +M  +G  P+++TY+ +I + +KA  +  A  +Y D + +G +PD
Sbjct: 454 YGKQGRLDIVSFLVQDMRRRGVAPSVLTYSTLIDIYSKAGMHGDAFNVYLDFKESGLKPD 513

Query: 535 KVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYE 594
            V +S  ++ L   G ++ A ++  +M      P+   Y  ++D +GK+  + +      
Sbjct: 514 VVLFSSFIDTLAKNGLVEWALSLLNDMTEMGIKPNVVTYNTIIDAFGKSKVLSEEDPEAG 573

Query: 595 AMLQAG------LRPNVPTCNSLLSAFLRVGQLSDAYHLL---QGMLNLGLKPSLQTYTL 645
            M   G      +R   P      +  +R+ +  + Y +L   Q M+  G++P++ T++ 
Sbjct: 574 EMGIVGVYNGQIIRAANPVTRGRSAIDVRMRRSQELYFILELFQKMVQQGVRPNVVTFSA 633

Query: 646 LLSCCTEARSPYDMGFCHELMAVSGH----PAHMFLLSMPSPGPDGQNVRDHVGSFLEMM 701
           +L+ C+   +  D     E + +  +     A+  L+         Q +     S    +
Sbjct: 634 ILNACSRCNNFEDAALLLEQLRLFDNFVYGVAYGLLMGY-------QEIWSQAQSLFNQL 686

Query: 702 HSEDRESKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAVKEKGMSYWLINLHVM 761
              D  +     +A+ D L   G ++ A  V      + V+ +   E     + ++LH+M
Sbjct: 687 GRMDSPTSSAFYNALTDVLWHFGQRQGAQLVVLEGVNRRVWDNTWSE-----FCLDLHLM 741

Query: 762 SDGTAVIALSRTLAWFRKQMLISGVGPSRIDIVTGWGRRSRVTGTSLVRQAVQELLHMFS 821
           S G A   +   L   R  +      P  + I+TGWG+ S++ G S +R  ++ LL+   
Sbjct: 742 SCGAAQAMVHAWLLNVRSIVFEGRAMPEFLSILTGWGKHSKIAGASTLRHVIEALLNSIG 801

Query: 822 FPFFTENGNSGCFVGCGEPLNKWLLQSYVDRMHLL 856
            PF  E  N G FV     +  WL +S    + LL
Sbjct: 802 APFQVERFNIGRFVSPSAVVAAWLRESGTMNILLL 836



 Score =  141 bits (355), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 88/301 (29%), Positives = 151/301 (50%), Gaps = 9/301 (2%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAIN-----KLLDQMVRDGCQPNVVTYNRLIHSYG 406
           + AG +    TY  ++   G+    G ++         QM+RD   P+  T+N L+ +  
Sbjct: 260 KGAGLRPTTVTYNAVIDACGK----GGVDLRFTLGYFRQMLRDRLCPDRKTFNSLLSACS 315

Query: 407 RANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTF 466
           RA +L +A  +F +M  +G   D  TY T ID   K G +++AM +   M+A  + P+  
Sbjct: 316 RAGHLEDARALFDEMIHLGIGRDIYTYNTFIDAICKCGNIELAMQVLLDMEAKNVKPNVV 375

Query: 467 TYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDM 526
           TYS +I+   K      A +L+ +M + G   + V YN ++A+  KA  Y     +  +M
Sbjct: 376 TYSTLIDGYSKLEKYDEALKLYEKMKSLGIQLDRVCYNTVLAIYVKAGKYGEIAIVCDEM 435

Query: 527 QNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNV 586
           +++G E D VTY+ ++   G  G LD    +  +MRR+   P    Y  L+D++ KAG  
Sbjct: 436 EDSGIEKDTVTYNSLINGYGKQGRLDIVSFLVQDMRRRGVAPSVLTYSTLIDIYSKAGMH 495

Query: 587 RKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLL 646
             A+  Y    ++GL+P+V   +S +    + G +  A  LL  M  +G+KP++ TY  +
Sbjct: 496 GDAFNVYLDFKESGLKPDVVLFSSFIDTLAKNGLVEWALSLLNDMTEMGIKPNVVTYNTI 555

Query: 647 L 647
           +
Sbjct: 556 I 556



 Score =  130 bits (328), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 82/291 (28%), Positives = 145/291 (49%), Gaps = 1/291 (0%)

Query: 364 TTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQV 423
           T  +G LG+  +     +  D  +  G    V   + LI +Y R+  +NEA+ V + M+ 
Sbjct: 202 TAAIGALGKMSRPDLARRAFDAGIAGGYGNTVFANSALISAYARSGLVNEAMGVLESMKG 261

Query: 424 VGCEPDRVTYCTLIDIHAKAGF-LDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQ 482
            G  P  VTY  +ID   K G  L   +  +++M    L PD  T++ +++   +AGHL+
Sbjct: 262 AGLRPTTVTYNAVIDACGKGGVDLRFTLGYFRQMLRDRLCPDRKTFNSLLSACSRAGHLE 321

Query: 483 AAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVM 542
            A  LF EM++ G   ++ TYN  I    K  N + A+++  DM+    +P+ VTYS ++
Sbjct: 322 DARALFDEMIHLGIGRDIYTYNTFIDAICKCGNIELAMQVLLDMEAKNVKPNVVTYSTLI 381

Query: 543 EVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLR 602
           +        DEA  ++ +M+      D   Y  ++ ++ KAG   +     + M  +G+ 
Sbjct: 382 DGYSKLEKYDEALKLYEKMKSLGIQLDRVCYNTVLAIYVKAGKYGEIAIVCDEMEDSGIE 441

Query: 603 PNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEA 653
            +  T NSL++ + + G+L     L+Q M   G+ PS+ TY+ L+   ++A
Sbjct: 442 KDTVTYNSLINGYGKQGRLDIVSFLVQDMRRRGVAPSVLTYSTLIDIYSKA 492



 Score = 80.5 bits (197), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 71/322 (22%), Positives = 131/322 (40%), Gaps = 10/322 (3%)

Query: 447 DVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIM 506
           D+A   +    A G     F  S +I+   ++G +  A  +   M   G  P  VTYN +
Sbjct: 215 DLARRAFDAGIAGGYGNTVFANSALISAYARSGLVNEAMGVLESMKGAGLRPTTVTYNAV 274

Query: 507 I-ALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKN 565
           I A      + +  L  +R M      PD+ T++ ++      G+L++A A+F EM    
Sbjct: 275 IDACGKGGVDLRFTLGYFRQMLRDRLCPDRKTFNSLLSACSRAGHLEDARALFDEMIHLG 334

Query: 566 WVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAY 625
              D   Y   +D   K GN+  A +    M    ++PNV T ++L+  + ++ +  +A 
Sbjct: 335 IGRDIYTYNTFIDAICKCGNIELAMQVLLDMEAKNVKPNVVTYSTLIDGYSKLEKYDEAL 394

Query: 626 HLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGFCHELMAVSGHPAHMFLLSMPSPGP 685
            L + M +LG++     Y  +L+   +A    ++    + M  SG        +    G 
Sbjct: 395 KLYEKMKSLGIQLDRVCYNTVLAIYVKAGKYGEIAIVCDEMEDSGIEKDTVTYNSLINGY 454

Query: 686 DGQNVRDHVGSFLEMMHSEDRESKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDA 745
             Q   D V   ++ M              ++D   K+G+  +A +V+    +  + PD 
Sbjct: 455 GKQGRLDIVSFLVQDMRRRGVAPSVLTYSTLIDIYSKAGMHGDAFNVYLDFKESGLKPDV 514

Query: 746 V---------KEKGMSYWLINL 758
           V          + G+  W ++L
Sbjct: 515 VLFSSFIDTLAKNGLVEWALSL 536


>gi|15224262|ref|NP_179484.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75099137|sp|O64624.1|PP163_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g18940
 gi|3004555|gb|AAC09028.1| putative salt-inducible protein [Arabidopsis thaliana]
 gi|15983785|gb|AAL10489.1| At2g18940/F19F24.14 [Arabidopsis thaliana]
 gi|38564280|gb|AAR23719.1| At2g18940/F19F24.14 [Arabidopsis thaliana]
 gi|330251736|gb|AEC06830.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 822

 Score =  177 bits (448), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 105/359 (29%), Positives = 175/359 (48%), Gaps = 8/359 (2%)

Query: 291 FASTGNVVESVSRILRQWKWGPLAEEALGNTNYSMDAYQANQVLKQLQDHTVALGFFNWL 350
           ++ TG   +++    R  + GP     L   N  +D +      K  +     LG  + +
Sbjct: 220 YSRTGKYEKAIDLFERMKEMGP--SPTLVTYNVILDVFG-----KMGRSWRKILGVLDEM 272

Query: 351 RRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANY 410
           R + G K DE T +T++    R        +   ++   G +P  VTYN L+  +G+A  
Sbjct: 273 RSK-GLKFDEFTCSTVLSACAREGLLREAKEFFAELKSCGYEPGTVTYNALLQVFGKAGV 331

Query: 411 LNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSV 470
             EAL V K+M+   C  D VTY  L+  + +AGF   A  + + M   G+ P+  TY+ 
Sbjct: 332 YTEALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAITYTT 391

Query: 471 IINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAG 530
           +I+  GKAG    A +LF  M   GC+PN  TYN +++L  K       +K+  DM++ G
Sbjct: 392 VIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSRSNEMIKMLCDMKSNG 451

Query: 531 FEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAW 590
             P++ T++ ++ + G+ G       VF EM+   + PD   +  L+  +G+ G+   A 
Sbjct: 452 CSPNRATWNTMLALCGNKGMDKFVNRVFREMKSCGFEPDRDTFNTLISAYGRCGSEVDAS 511

Query: 591 EWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSC 649
           + Y  M +AG    V T N+LL+A  R G      +++  M + G KP+  +Y+L+L C
Sbjct: 512 KMYGEMTRAGFNACVTTYNALLNALARKGDWRSGENVISDMKSKGFKPTETSYSLMLQC 570



 Score =  153 bits (387), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 91/312 (29%), Positives = 156/312 (50%), Gaps = 4/312 (1%)

Query: 343 ALGFFNWL---RRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYN 399
           A+  F WL         K D       V ILGR  Q+    KLLD++       +V  Y 
Sbjct: 155 AVFLFEWLVLSSNSGALKLDHQVIEIFVRILGRESQYSVAAKLLDKIPLQEYLLDVRAYT 214

Query: 400 RLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAG-FLDVAMDMYKKMQA 458
            ++H+Y R     +A+D+F++M+ +G  P  VTY  ++D+  K G      + +  +M++
Sbjct: 215 TILHAYSRTGKYEKAIDLFERMKEMGPSPTLVTYNVILDVFGKMGRSWRKILGVLDEMRS 274

Query: 459 AGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQS 518
            GL  D FT S +++   + G L+ A + F E+ + G  P  VTYN ++ +  KA  Y  
Sbjct: 275 KGLKFDEFTCSTVLSACAREGLLREAKEFFAELKSCGYEPGTVTYNALLQVFGKAGVYTE 334

Query: 519 ALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVD 578
           AL + ++M+      D VTY+ ++      G+  EA  V   M +K  +P+   Y  ++D
Sbjct: 335 ALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAITYTTVID 394

Query: 579 LWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKP 638
            +GKAG   +A + + +M +AG  PN  T N++LS   +  + ++   +L  M + G  P
Sbjct: 395 AYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSRSNEMIKMLCDMKSNGCSP 454

Query: 639 SLQTYTLLLSCC 650
           +  T+  +L+ C
Sbjct: 455 NRATWNTMLALC 466



 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 85/344 (24%), Positives = 157/344 (45%), Gaps = 42/344 (12%)

Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLI 402
           AL  F +  ++AG   +  TY  ++ +LG+  +   + K+L  M  +GC PN  T+N ++
Sbjct: 405 ALKLF-YSMKEAGCVPNTCTYNAVLSLLGKKSRSNEMIKMLCDMKSNGCSPNRATWNTML 463

Query: 403 HSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLS 462
              G          VF++M+  G EPDR T+ TLI  + + G    A  MY +M  AG +
Sbjct: 464 ALCGNKGMDKFVNRVFREMKSCGFEPDRDTFNTLISAYGRCGSEVDASKMYGEMTRAGFN 523

Query: 463 PDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNY------ 516
               TY+ ++N L + G  ++   +  +M ++G  P   +Y++M+   AK  NY      
Sbjct: 524 ACVTTYNALLNALARKGDWRSGENVISDMKSKGFKPTETSYSLMLQCYAKGGNYLGIERI 583

Query: 517 --------------------------------QSALKLYRDMQNAGFEPDKVTYSIVMEV 544
                                           + A  L++     G++PD V ++ ++ +
Sbjct: 584 ENRIKEGQIFPSWMLLRTLLLANFKCRALAGSERAFTLFK---KHGYKPDMVIFNSMLSI 640

Query: 545 LGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPN 604
                  D+AE +   +R     PD   Y  L+D++ + G   KA E  + + ++ L+P+
Sbjct: 641 FTRNNMYDQAEGILESIREDGLSPDLVTYNSLMDMYVRRGECWKAEEILKTLEKSQLKPD 700

Query: 605 VPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
           + + N+++  F R G + +A  +L  M   G++P + TY   +S
Sbjct: 701 LVSYNTVIKGFCRRGLMQEAVRMLSEMTERGIRPCIFTYNTFVS 744



 Score = 85.5 bits (210), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 65/311 (20%), Positives = 124/311 (39%), Gaps = 41/311 (13%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           +  GF+ D  T+ T++   GR       +K+  +M R G    V TYN L+++  R    
Sbjct: 483 KSCGFEPDRDTFNTLISAYGRCGSEVDASKMYGEMTRAGFNACVTTYNALLNALARKGDW 542

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAG-FLDV---------------------- 448
               +V   M+  G +P   +Y  ++  +AK G +L +                      
Sbjct: 543 RSGENVISDMKSKGFKPTETSYSLMLQCYAKGGNYLGIERIENRIKEGQIFPSWMLLRTL 602

Query: 449 ---------------AMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVN 493
                          A  ++KK    G  PD   ++ +++   +      A  +   +  
Sbjct: 603 LLANFKCRALAGSERAFTLFKK---HGYKPDMVIFNSMLSIFTRNNMYDQAEGILESIRE 659

Query: 494 QGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDE 553
            G  P+LVTYN ++ +  +      A ++ + ++ +  +PD V+Y+ V++     G + E
Sbjct: 660 DGLSPDLVTYNSLMDMYVRRGECWKAEEILKTLEKSQLKPDLVSYNTVIKGFCRRGLMQE 719

Query: 554 AEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLS 613
           A  + +EM  +   P    Y   V  +   G   +  +  E M +   RPN  T   ++ 
Sbjct: 720 AVRMLSEMTERGIRPCIFTYNTFVSGYTAMGMFAEIEDVIECMAKNDCRPNELTFKMVVD 779

Query: 614 AFLRVGQLSDA 624
            + R G+ S+A
Sbjct: 780 GYCRAGKYSEA 790



 Score = 83.6 bits (205), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 46/184 (25%), Positives = 86/184 (46%), Gaps = 2/184 (1%)

Query: 350 LRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRAN 409
           L ++ G+K D   + +M+ I  R   +     +L+ +  DG  P++VTYN L+  Y R  
Sbjct: 621 LFKKHGYKPDMVIFNSMLSIFTRNNMYDQAEGILESIREDGLSPDLVTYNSLMDMYVRRG 680

Query: 410 YLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYS 469
              +A ++ K ++    +PD V+Y T+I    + G +  A+ M  +M   G+ P  FTY+
Sbjct: 681 ECWKAEEILKTLEKSQLKPDLVSYNTVIKGFCRRGLMQEAVRMLSEMTERGIRPCIFTYN 740

Query: 470 VIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNA 529
             ++     G       +   M    C PN +T+ +++    +A  Y  A+     ++  
Sbjct: 741 TFVSGYTAMGMFAEIEDVIECMAKNDCRPNELTFKMVVDGYCRAGKYSEAMDFVSKIKT- 799

Query: 530 GFEP 533
            F+P
Sbjct: 800 -FDP 802



 Score = 81.6 bits (200), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 52/241 (21%), Positives = 109/241 (45%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           +  GFK  E +Y+ M+    +   +  I ++ +++      P+ +    L+ +  +   L
Sbjct: 553 KSKGFKPTETSYSLMLQCYAKGGNYLGIERIENRIKEGQIFPSWMLLRTLLLANFKCRAL 612

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
             +   F   +  G +PD V + +++ I  +    D A  + + ++  GLSPD  TY+ +
Sbjct: 613 AGSERAFTLFKKHGYKPDMVIFNSMLSIFTRNNMYDQAEGILESIREDGLSPDLVTYNSL 672

Query: 472 INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF 531
           ++   + G    A ++   +      P+LV+YN +I    +    Q A+++  +M   G 
Sbjct: 673 MDMYVRRGECWKAEEILKTLEKSQLKPDLVSYNTVIKGFCRRGLMQEAVRMLSEMTERGI 732

Query: 532 EPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWE 591
            P   TY+  +      G   E E V   M + +  P+E  + ++VD + +AG   +A +
Sbjct: 733 RPCIFTYNTFVSGYTAMGMFAEIEDVIECMAKNDCRPNELTFKMVVDGYCRAGKYSEAMD 792

Query: 592 W 592
           +
Sbjct: 793 F 793



 Score = 52.8 bits (125), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 31/132 (23%), Positives = 58/132 (43%), Gaps = 14/132 (10%)

Query: 326 DAYQANQVLKQLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQ 385
           + ++A ++LK L+              ++  K D  +Y T++    R        ++L +
Sbjct: 681 ECWKAEEILKTLE--------------KSQLKPDLVSYNTVIKGFCRRGLMQEAVRMLSE 726

Query: 386 MVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGF 445
           M   G +P + TYN  +  Y       E  DV + M    C P+ +T+  ++D + +AG 
Sbjct: 727 MTERGIRPCIFTYNTFVSGYTAMGMFAEIEDVIECMAKNDCRPNELTFKMVVDGYCRAGK 786

Query: 446 LDVAMDMYKKMQ 457
              AMD   K++
Sbjct: 787 YSEAMDFVSKIK 798


>gi|357502615|ref|XP_003621596.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355496611|gb|AES77814.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 849

 Score =  176 bits (447), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 135/530 (25%), Positives = 234/530 (44%), Gaps = 51/530 (9%)

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
           Q G   D  TY T +  L +  Q     ++L++M      P VVTY+ +I    +AN L 
Sbjct: 312 QKGIVRDAFTYNTYLDTLCKGGQIDLARRVLEEMSSRRVWPTVVTYSTMIDGCAKANLLE 371

Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
           +AL+++++M++     DRV+Y T++ I+AK G  D A+   K+M++ G+  D  TY+ ++
Sbjct: 372 DALNLYEEMKLRSISVDRVSYNTMVGIYAKLGRFDEAIGQCKEMESCGMKRDVVTYNALL 431

Query: 473 NCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFE 532
           +  G+ G      +LF EM      PN +TY+ MI +  K   +Q A+ +Y+D + A  E
Sbjct: 432 SGYGRYGMYDEVRRLFEEMKAWNIYPNTLTYSTMIDVYTKGGMFQEAMDVYKDFKKAQLE 491

Query: 533 PDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVD-----------LWG 581
            D V Y+ +++ L   G ++ +  +   M  K   P+   +  ++D           + G
Sbjct: 492 VDVVFYTSIIDSLCKNGLVESSIMLLIAMIEKGIKPNVVTFNSIIDASRQSPTLEYGVHG 551

Query: 582 KAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYH--------------- 626
            +  V    E   +ML  G   N    + +L  F ++      +                
Sbjct: 552 SSQAVEYPTEQLSSMLIDGAFQNKTGDDRILKMFEQLAAEKAGHREKDRKGRQDQHCILW 611

Query: 627 LLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMG--------FCHELMAVSGHPAHMFLL 678
           L Q M  L +KP++ T++ +L+ C+   S  D          F +++  V+    H  L+
Sbjct: 612 LFQKMHELNIKPNVVTFSAILNACSRCNSFEDASMLLGALRLFDNQVYGVT----HGLLM 667

Query: 679 SMPSPGPDGQNVRDHVGSFLEMMHSEDRESKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQ 738
                    + V     +  + M   D  +     +A+ D L + G +  A  V     +
Sbjct: 668 GYR------EQVWFQAQTLFDEMRRMDSSTASAFYNALTDMLWQFGQRRGAEMVVTEGRR 721

Query: 739 KNVYPDAVKEKG-MSYWLINLHVMSDGTAVIALSRTLAWFRKQMLISGVGPSRIDIVTGW 797
           +NV+      KG  S   ++LH+MS G A   +   L      +      P  + I+TGW
Sbjct: 722 RNVW------KGEWSISCLDLHLMSCGAACAMVHSWLLNMHSTLFEGSELPKIVTILTGW 775

Query: 798 GRRSRVTGTSLVRQAVQELLHMFSFPFFTENGNSGCFVGCGEPLNKWLLQ 847
           G+ S+V G   +++AV+ LL+    PF    GN G +   G  L  WL Q
Sbjct: 776 GKHSKVMGDGTLKRAVEALLNGMGSPFRIAEGNLGRYYSPGNLLATWLRQ 825



 Score =  134 bits (338), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 82/314 (26%), Positives = 151/314 (48%), Gaps = 3/314 (0%)

Query: 341 TVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNR 400
           T    F  W  +Q G        +TM+G LGR  +     +L +    +G    V +++ 
Sbjct: 161 TKCFDFIIW--KQNGRIAKGKLVSTMIGTLGRLGEINHALRLFESARLEGHGNTVYSFSA 218

Query: 401 LIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGF-LDVAMDMYKKMQAA 459
           +I +YGR  + ++A+D+F+ M+  G  P+ ++Y +LID  AK     DV +  + +M A 
Sbjct: 219 MISAYGRNGHFSDAVDLFRSMRSWGVYPNLISYNSLIDAGAKGEVDFDVVVKFFDEMLAE 278

Query: 460 GLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSA 519
           G+ PD  TY+ +++     G  + A +L  EM  +G + +  TYN  +    K      A
Sbjct: 279 GIVPDRLTYNSLLSVCASKGMWETAQKLLSEMDQKGIVRDAFTYNTYLDTLCKGGQIDLA 338

Query: 520 LKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDL 579
            ++  +M +    P  VTYS +++       L++A  ++ EM+ ++   D   Y  +V +
Sbjct: 339 RRVLEEMSSRRVWPTVVTYSTMIDGCAKANLLEDALNLYEEMKLRSISVDRVSYNTMVGI 398

Query: 580 WGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPS 639
           + K G   +A    + M   G++ +V T N+LLS + R G   +   L + M    + P+
Sbjct: 399 YAKLGRFDEAIGQCKEMESCGMKRDVVTYNALLSGYGRYGMYDEVRRLFEEMKAWNIYPN 458

Query: 640 LQTYTLLLSCCTEA 653
             TY+ ++   T+ 
Sbjct: 459 TLTYSTMIDVYTKG 472



 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 81/338 (23%), Positives = 152/338 (44%), Gaps = 36/338 (10%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANY- 410
           R  G  +  ++++ M+   GR   F     L   M   G  PN+++YN LI +  +    
Sbjct: 205 RLEGHGNTVYSFSAMISAYGRNGHFSDAVDLFRSMRSWGVYPNLISYNSLIDAGAKGEVD 264

Query: 411 LNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSV 470
            +  +  F +M   G  PDR+TY +L+ + A  G  + A  +  +M   G+  D FTY+ 
Sbjct: 265 FDVVVKFFDEMLAEGIVPDRLTYNSLLSVCASKGMWETAQKLLSEMDQKGIVRDAFTYNT 324

Query: 471 IINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTY--------------------------- 503
            ++ L K G +  A ++  EM ++   P +VTY                           
Sbjct: 325 YLDTLCKGGQIDLARRVLEEMSSRRVWPTVVTYSTMIDGCAKANLLEDALNLYEEMKLRS 384

Query: 504 --------NIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAE 555
                   N M+ + AK   +  A+   ++M++ G + D VTY+ ++   G  G  DE  
Sbjct: 385 ISVDRVSYNTMVGIYAKLGRFDEAIGQCKEMESCGMKRDVVTYNALLSGYGRYGMYDEVR 444

Query: 556 AVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAF 615
            +F EM+  N  P+   Y  ++D++ K G  ++A + Y+   +A L  +V    S++ + 
Sbjct: 445 RLFEEMKAWNIYPNTLTYSTMIDVYTKGGMFQEAMDVYKDFKKAQLEVDVVFYTSIIDSL 504

Query: 616 LRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEA 653
            + G +  +  LL  M+  G+KP++ T+  ++    ++
Sbjct: 505 CKNGLVESSIMLLIAMIEKGIKPNVVTFNSIIDASRQS 542



 Score = 42.7 bits (99), Expect = 0.92,   Method: Compositional matrix adjust.
 Identities = 45/218 (20%), Positives = 90/218 (41%), Gaps = 5/218 (2%)

Query: 538 YSIVMEVLGHCGYLDEAEAVFAEM--RRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEA 595
           Y  +++  G+ G+   A   F  +  ++   +    +   ++   G+ G +  A   +E+
Sbjct: 144 YIYMLKEFGNTGHFLLATKCFDFIIWKQNGRIAKGKLVSTMIGTLGRLGEINHALRLFES 203

Query: 596 MLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARS 655
               G    V + ++++SA+ R G  SDA  L + M + G+ P+L +Y  L+    +   
Sbjct: 204 ARLEGHGNTVYSFSAMISAYGRNGHFSDAVDLFRSMRSWGVYPNLISYNSLIDAGAKGEV 263

Query: 656 PYD--MGFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRESKRGLV 713
            +D  + F  E++A    P  +   S+ S     + + +     L  M  +         
Sbjct: 264 DFDVVVKFFDEMLAEGIVPDRLTYNSLLSVCAS-KGMWETAQKLLSEMDQKGIVRDAFTY 322

Query: 714 DAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAVKEKGM 751
           +  +D L K G  + A  V E  + + V+P  V    M
Sbjct: 323 NTYLDTLCKGGQIDLARRVLEEMSSRRVWPTVVTYSTM 360


>gi|302806549|ref|XP_002985024.1| hypothetical protein SELMODRAFT_121499 [Selaginella moellendorffii]
 gi|300147234|gb|EFJ13899.1| hypothetical protein SELMODRAFT_121499 [Selaginella moellendorffii]
          Length = 570

 Score =  176 bits (447), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 101/325 (31%), Positives = 170/325 (52%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           G   D HTYT +V  L + ++      L++++  +GC P + TYN L++   +   L EA
Sbjct: 160 GCTIDIHTYTAIVDWLAKNKKIQDAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEA 219

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
           +D+ +++   GC PD VTY +LID   K      A  ++K+M   GL  DT  Y+ +I  
Sbjct: 220 IDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMALRGLVLDTVCYTALIRG 279

Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPD 534
           L +AG +  A  ++  M +QGC+P++VT + MI    KA    +A+++++ M+  G  P+
Sbjct: 280 LLQAGKIPQASSVYKTMTSQGCVPDVVTLSTMIDGLCKAGRIGAAVRIFKSMEARGLAPN 339

Query: 535 KVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYE 594
           +V YS ++  L     +D A  + A+M++    PD   Y +L+D   K+G+V  A  +++
Sbjct: 340 EVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFD 399

Query: 595 AMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEAR 654
            ML+AG +P+V T N L+S F + G    A  +   M +    P++ TY  L+S   + R
Sbjct: 400 EMLEAGCKPDVYTYNILVSGFCKAGNTDAACGVFDDMSSSHCSPNVVTYGTLISGLCKRR 459

Query: 655 SPYDMGFCHELMAVSGHPAHMFLLS 679
                    + M   G P   F+ S
Sbjct: 460 QLTKASLYFQHMKERGCPPDSFVYS 484



 Score =  152 bits (383), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 98/286 (34%), Positives = 143/286 (50%)

Query: 362 TYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQM 421
           TY  ++  L +  +      LL ++V +GC P+VVTY  LI   G+     EA  +FK+M
Sbjct: 202 TYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEM 261

Query: 422 QVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHL 481
            + G   D V Y  LI    +AG +  A  +YK M + G  PD  T S +I+ L KAG +
Sbjct: 262 ALRGLVLDTVCYTALIRGLLQAGKIPQASSVYKTMTSQGCVPDVVTLSTMIDGLCKAGRI 321

Query: 482 QAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIV 541
            AA ++F  M  +G  PN V Y+ +I    KAR    AL++   M+ A   PD +TY+I+
Sbjct: 322 GAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNIL 381

Query: 542 MEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGL 601
           ++ L   G ++ A A F EM      PD   Y +LV  + KAGN   A   ++ M  +  
Sbjct: 382 IDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILVSGFCKAGNTDAACGVFDDMSSSHC 441

Query: 602 RPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
            PNV T  +L+S   +  QL+ A    Q M   G  P    Y+ L+
Sbjct: 442 SPNVVTYGTLISGLCKRRQLTKASLYFQHMKERGCPPDSFVYSSLV 487



 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 91/300 (30%), Positives = 146/300 (48%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           G   D  TYT+++  LG+ ++     KL  +M   G   + V Y  LI    +A  + +A
Sbjct: 230 GCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMALRGLVLDTVCYTALIRGLLQAGKIPQA 289

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
             V+K M   GC PD VT  T+ID   KAG +  A+ ++K M+A GL+P+   YS +I+ 
Sbjct: 290 SSVYKTMTSQGCVPDVVTLSTMIDGLCKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHG 349

Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPD 534
           L KA  +  A ++  +M    C P+ +TYNI+I    K+ + ++A   + +M  AG +PD
Sbjct: 350 LCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLEAGCKPD 409

Query: 535 KVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYE 594
             TY+I++      G  D A  VF +M   +  P+   YG L+    K   + KA  +++
Sbjct: 410 VYTYNILVSGFCKAGNTDAACGVFDDMSSSHCSPNVVTYGTLISGLCKRRQLTKASLYFQ 469

Query: 595 AMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEAR 654
            M + G  P+    +SL+    + G+L     L   M   G+  S     L+   C   R
Sbjct: 470 HMKERGCPPDSFVYSSLVDGLCKSGKLEGGCMLFDEMERSGVANSQTRTRLIFHLCKANR 529



 Score =  132 bits (333), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 92/342 (26%), Positives = 158/342 (46%), Gaps = 2/342 (0%)

Query: 315 EEALGNTNYSMDAYQANQVLKQLQDHTVALGFFNWLRR-QAGFKHDEHTYTTMVGILGRA 373
           E A+G     +      ++ + L+D  +A   F  L   + GF+H  HT   ++ +  R 
Sbjct: 13  EAAVGRLRREISTDAVVKIFQCLKDADLAWELFQCLSSPRFGFQHSVHTGNALLDVFART 72

Query: 374 RQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQV-VGCEPDRVT 432
           ++      LL   +     P+V T+N LI  Y  A    EA  V ++M+   G  P   T
Sbjct: 73  KRHREAGNLLKNELATTFLPDVETWNVLITGYCLAREPEEAFAVIREMEEDYGVAPSLKT 132

Query: 433 YCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMV 492
           +  ++    K+G +  AMD ++     G + D  TY+ I++ L K   +Q A  L  ++ 
Sbjct: 133 HNLVLHGLCKSGKVLAAMDHFETTTTNGCTIDIHTYTAIVDWLAKNKKIQDAVALMEKIT 192

Query: 493 NQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLD 552
             GC P + TYN ++    K    + A+ L R + + G  PD VTY+ +++ LG      
Sbjct: 193 ANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSF 252

Query: 553 EAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLL 612
           EA  +F EM  +  V D   Y  L+    +AG + +A   Y+ M   G  P+V T ++++
Sbjct: 253 EAYKLFKEMALRGLVLDTVCYTALIRGLLQAGKIPQASSVYKTMTSQGCVPDVVTLSTMI 312

Query: 613 SAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEAR 654
               + G++  A  + + M   GL P+   Y+ L+    +AR
Sbjct: 313 DGLCKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKAR 354



 Score =  126 bits (316), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 94/364 (25%), Positives = 163/364 (44%), Gaps = 5/364 (1%)

Query: 289 RHFASTGNVVESV-SRILRQWKWGPLAEEALGNTNYSMDAYQANQVLKQL---QDHTVAL 344
           +H   TGN +  V +R  R  + G L +  L  T +  D    N ++      ++   A 
Sbjct: 56  QHSVHTGNALLDVFARTKRHREAGNLLKNELATT-FLPDVETWNVLITGYCLAREPEEAF 114

Query: 345 GFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHS 404
                +    G      T+  ++  L ++ +  A     +    +GC  ++ TY  ++  
Sbjct: 115 AVIREMEEDYGVAPSLKTHNLVLHGLCKSGKVLAAMDHFETTTTNGCTIDIHTYTAIVDW 174

Query: 405 YGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPD 464
             +   + +A+ + +++   GC P   TY  L++   K G L+ A+D+ +K+   G +PD
Sbjct: 175 LAKNKKIQDAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPD 234

Query: 465 TFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYR 524
             TY+ +I+ LGK      A++LF EM  +G + + V Y  +I    +A     A  +Y+
Sbjct: 235 VVTYTSLIDGLGKEKRSFEAYKLFKEMALRGLVLDTVCYTALIRGLLQAGKIPQASSVYK 294

Query: 525 DMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAG 584
            M + G  PD VT S +++ L   G +  A  +F  M  +   P+E VY  L+    KA 
Sbjct: 295 TMTSQGCVPDVVTLSTMIDGLCKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKAR 354

Query: 585 NVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYT 644
            +  A E    M +A   P+  T N L+    + G +  A      ML  G KP + TY 
Sbjct: 355 KMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYN 414

Query: 645 LLLS 648
           +L+S
Sbjct: 415 ILVS 418



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 54/175 (30%), Positives = 88/175 (50%), Gaps = 3/175 (1%)

Query: 339 DHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTY 398
           D   A  FF+ +  +AG K D +TY  +V    +A    A   + D M    C PNVVTY
Sbjct: 390 DVEAARAFFDEML-EAGCKPDVYTYNILVSGFCKAGNTDAACGVFDDMSSSHCSPNVVTY 448

Query: 399 NRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQA 458
             LI    +   L +A   F+ M+  GC PD   Y +L+D   K+G L+    ++ +M+ 
Sbjct: 449 GTLISGLCKRRQLTKASLYFQHMKERGCPPDSFVYSSLVDGLCKSGKLEGGCMLFDEMER 508

Query: 459 AGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKA 513
           +G++ ++ T + +I  L KA  +  A  LF  +  +G +P+   YN +I+   K+
Sbjct: 509 SGVA-NSQTRTRLIFHLCKANRVDEAVSLFNAIRKEG-MPHPYAYNSIISTLIKS 561


>gi|302780401|ref|XP_002971975.1| hypothetical protein SELMODRAFT_96626 [Selaginella moellendorffii]
 gi|300160274|gb|EFJ26892.1| hypothetical protein SELMODRAFT_96626 [Selaginella moellendorffii]
          Length = 755

 Score =  176 bits (447), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 104/315 (33%), Positives = 162/315 (51%), Gaps = 2/315 (0%)

Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLI 402
           A  +F  ++++ G   +E TY  ++    +  +      LL +M   G  PNVVTY+ +I
Sbjct: 145 ATTYFAKMKKK-GTVPNEWTYNVLINGFCKVHKVHRAYLLLKEMKESGLAPNVVTYSTVI 203

Query: 403 HSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLS 462
           H + R   ++ A  +F+QM   GC P+ VTY TL+    + G +D A ++  +M+  GL 
Sbjct: 204 HGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCRNGLMDEAYELLDEMRERGLQ 263

Query: 463 PDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKL 522
           PD F+Y  ++  L K G +  A ++F +  N  C P++V Y+ +IA   KA     A KL
Sbjct: 264 PDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYSTLIAGLCKAGRLDEACKL 323

Query: 523 YRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGK 582
           +  M+    EPD VT++ +M+ L     L EA+ V   M  +N  P+   Y  L+D   K
Sbjct: 324 FEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRNCTPNVITYSSLIDGLCK 383

Query: 583 AGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQT 642
            G VR A E ++ M+  G+ PNV T NSL+  F     +  A  L++ M   G  P + T
Sbjct: 384 TGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSALLLMEEMTATGCLPDIIT 443

Query: 643 Y-TLLLSCCTEARSP 656
           Y TL+   C   R+P
Sbjct: 444 YNTLIDGLCKTGRAP 458



 Score =  166 bits (420), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 98/296 (33%), Positives = 160/296 (54%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           R+   + D  T+T ++  L +  +     ++L+ M    C PNV+TY+ LI    +   +
Sbjct: 328 RENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRNCTPNVITYSSLIDGLCKTGQV 387

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
            +A +VFK+M V G EP+ VTY +LI        +D A+ + ++M A G  PD  TY+ +
Sbjct: 388 RDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSALLLMEEMTATGCLPDIITYNTL 447

Query: 472 INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF 531
           I+ L K G    A++LF +M  + C P+++TY+ +I    K      A  L+ DM     
Sbjct: 448 IDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCLIGGFCKLERIDMARTLFDDMLKQAV 507

Query: 532 EPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWE 591
            PD VT+S ++E   + G +D+AE +  EM   +  PD   Y  LVD + K G + +A  
Sbjct: 508 LPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDCSPDVYTYTSLVDGFCKVGRMVEARR 567

Query: 592 WYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
             + M + G +PNV T  +L+ AF R G+ + AY LL+ M+  G++P++ TY  L+
Sbjct: 568 VLKRMAKRGCQPNVVTYTALIDAFCRAGKPTVAYRLLEEMVGNGVQPNVITYRSLI 623



 Score =  157 bits (398), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 90/298 (30%), Positives = 155/298 (52%)

Query: 359 DEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVF 418
           D   Y+T++  L +A +     KL ++M  + C+P+VVT+  L+    + + L EA  V 
Sbjct: 300 DVVAYSTLIAGLCKAGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVL 359

Query: 419 KQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKA 478
           + M+   C P+ +TY +LID   K G +  A +++K+M   G+ P+  TY+ +I+     
Sbjct: 360 ETMEDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMT 419

Query: 479 GHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTY 538
             + +A  L  EM   GC+P+++TYN +I    K      A +L+ DM+     PD +TY
Sbjct: 420 NGVDSALLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITY 479

Query: 539 SIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQ 598
           S ++        +D A  +F +M ++  +PD   +  LV+ +  AG V  A    E M+ 
Sbjct: 480 SCLIGGFCKLERIDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVA 539

Query: 599 AGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSP 656
           +   P+V T  SL+  F +VG++ +A  +L+ M   G +P++ TYT L+     A  P
Sbjct: 540 SDCSPDVYTYTSLVDGFCKVGRMVEARRVLKRMAKRGCQPNVVTYTALIDAFCRAGKP 597



 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 91/297 (30%), Positives = 152/297 (51%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           R+ G + D+ +Y T++  L +  +     K+ +      C P+VV Y+ LI    +A  L
Sbjct: 258 RERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYSTLIAGLCKAGRL 317

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
           +EA  +F++M+   CEPD VT+  L+D   K   L  A  + + M+    +P+  TYS +
Sbjct: 318 DEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRNCTPNVITYSSL 377

Query: 472 INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF 531
           I+ L K G ++ A ++F  M+ +G  PN+VTYN +I          SAL L  +M   G 
Sbjct: 378 IDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSALLLMEEMTATGC 437

Query: 532 EPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWE 591
            PD +TY+ +++ L   G   EA  +F +M+ K   PD   Y  L+  + K   +  A  
Sbjct: 438 LPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCLIGGFCKLERIDMART 497

Query: 592 WYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
            ++ ML+  + P+V T ++L+  +   G + DA  LL+ M+     P + TYT L+ 
Sbjct: 498 LFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDCSPDVYTYTSLVD 554



 Score =  153 bits (386), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 106/406 (26%), Positives = 183/406 (45%), Gaps = 16/406 (3%)

Query: 329 QANQVLKQLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVR 388
           +A QVL+ ++D                      TY++++  L +  Q     ++  +M+ 
Sbjct: 354 EAQQVLETMEDRNCTPNVI--------------TYSSLIDGLCKTGQVRDAQEVFKRMIV 399

Query: 389 DGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDV 448
            G +PNVVTYN LIH +   N ++ AL + ++M   GC PD +TY TLID   K G    
Sbjct: 400 RGIEPNVVTYNSLIHGFCMTNGVDSALLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPE 459

Query: 449 AMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIA 508
           A  ++  M+A   +PD  TYS +I    K   +  A  LF +M+ Q  +P++VT++ ++ 
Sbjct: 460 ANRLFGDMKAKFCNPDVITYSCLIGGFCKLERIDMARTLFDDMLKQAVLPDVVTFSTLVE 519

Query: 509 LQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVP 568
               A     A +L  +M  +   PD  TY+ +++     G + EA  V   M ++   P
Sbjct: 520 GYCNAGLVDDAERLLEEMVASDCSPDVYTYTSLVDGFCKVGRMVEARRVLKRMAKRGCQP 579

Query: 569 DEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLL 628
           +   Y  L+D + +AG    A+   E M+  G++PNV T  SL+  F   G L +A  +L
Sbjct: 580 NVVTYTALIDAFCRAGKPTVAYRLLEEMVGNGVQPNVITYRSLIGGFCGTGDLEEARKIL 639

Query: 629 QGM-LNLGLKPSLQTYTLLLS-CCTEARSPYDMGFCHELMAVSGHPAHMFLLSMPSPGPD 686
           + +  +   K  +  Y +++   C   R    +     +      P H   +++      
Sbjct: 640 ERLERDENCKADMFAYRVMMDGLCRTGRMSAALELLEAIKQSGTPPRHDIYVALIRGLCQ 699

Query: 687 GQNVRDHVGSFLEMMHSEDRESKRGLVDAVVDFLHKSGLKEEAGSV 732
           G+ +   +    EM  S          +AV+  L + G  EEA ++
Sbjct: 700 GKELGKAMEVLEEMTLSRKSRPNAEAYEAVIQELAREGRHEEANAL 745



 Score =  152 bits (383), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 101/347 (29%), Positives = 162/347 (46%), Gaps = 38/347 (10%)

Query: 337 LQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQF-------------------- 376
           + D   AL FF+W  +Q GF H+ +TY  +   L RAR+                     
Sbjct: 1   MSDPDAALRFFHWASKQQGFDHNVYTYNRLFEALLRARRIDETCHILKNGWPPGITPNVF 60

Query: 377 ------------GAINK---LLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQM 421
                       G ++K   LL++M   G  P+   YN +IH+  +A    +ALD F+ M
Sbjct: 61  TYAVVIQGLCKSGDLDKACELLEEMRESGPVPDAAIYNFVIHALCKARNTAKALDYFRSM 120

Query: 422 QVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHL 481
           +   CE + +T+  +ID   KA  L  A   + KM+  G  P+ +TY+V+IN   K   +
Sbjct: 121 E---CEKNVITWTIMIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKV 177

Query: 482 QAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIV 541
             A+ L  EM   G  PN+VTY+ +I    +     +A KL+R M   G  P+ VTY+ +
Sbjct: 178 HRAYLLLKEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTL 237

Query: 542 MEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGL 601
           +  L   G +DEA  +  EMR +   PD+  Y  L+    K G +  A + +E       
Sbjct: 238 LSGLCRNGLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDC 297

Query: 602 RPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
            P+V   ++L++   + G+L +A  L + M     +P + T+T L+ 
Sbjct: 298 PPDVVAYSTLIAGLCKAGRLDEACKLFEKMRENSCEPDVVTFTALMD 344



 Score =  149 bits (375), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 108/401 (26%), Positives = 184/401 (45%), Gaps = 12/401 (2%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           +++G   +  TY+T++    R  +     KL  QMV +GC PN+VTYN L+    R   +
Sbjct: 188 KESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCRNGLM 247

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
           +EA ++  +M+  G +PD+ +Y TL+    K G +D+A+ +++        PD   YS +
Sbjct: 248 DEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYSTL 307

Query: 472 INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF 531
           I  L KAG L  A +LF +M    C P++VT+  ++    K    Q A ++   M++   
Sbjct: 308 IAGLCKAGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRNC 367

Query: 532 EPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWE 591
            P+ +TYS +++ L   G + +A+ VF  M  +   P+   Y  L+  +     V  A  
Sbjct: 368 TPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSALL 427

Query: 592 WYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS--C 649
             E M   G  P++ T N+L+    + G+  +A  L   M      P + TY+ L+   C
Sbjct: 428 LMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCLIGGFC 487

Query: 650 CTE----ARSPYDMGFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSED 705
             E    AR+ +D     +++  +  P  +   S    G     + D     LE M + D
Sbjct: 488 KLERIDMARTLFD-----DMLKQAVLP-DVVTFSTLVEGYCNAGLVDDAERLLEEMVASD 541

Query: 706 RESKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAV 746
                    ++VD   K G   EA  V +  A++   P+ V
Sbjct: 542 CSPDVYTYTSLVDGFCKVGRMVEARRVLKRMAKRGCQPNVV 582



 Score =  147 bits (372), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 108/395 (27%), Positives = 183/395 (46%), Gaps = 3/395 (0%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           R++G   D   Y  ++  L +AR      K LD      C+ NV+T+  +I    +AN L
Sbjct: 86  RESGPVPDAAIYNFVIHALCKARNTA---KALDYFRSMECEKNVITWTIMIDGLCKANRL 142

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
            EA   F +M+  G  P+  TY  LI+   K   +  A  + K+M+ +GL+P+  TYS +
Sbjct: 143 PEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAYLLLKEMKESGLAPNVVTYSTV 202

Query: 472 INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF 531
           I+   +   +  A++LF +MV  GC+PNLVTYN +++   +      A +L  +M+  G 
Sbjct: 203 IHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCRNGLMDEAYELLDEMRERGL 262

Query: 532 EPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWE 591
           +PDK +Y  +M  L   G +D A  VF +    +  PD   Y  L+    KAG + +A +
Sbjct: 263 QPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYSTLIAGLCKAGRLDEACK 322

Query: 592 WYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCT 651
            +E M +    P+V T  +L+    +  +L +A  +L+ M +    P++ TY+ L+    
Sbjct: 323 LFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRNCTPNVITYSSLIDGLC 382

Query: 652 EARSPYDMGFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRESKRG 711
           +     D     + M V G   ++   +    G    N  D     +E M +        
Sbjct: 383 KTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSALLLMEEMTATGCLPDII 442

Query: 712 LVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAV 746
             + ++D L K+G   EA  ++     K   PD +
Sbjct: 443 TYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVI 477



 Score =  111 bits (278), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 71/276 (25%), Positives = 128/276 (46%), Gaps = 2/276 (0%)

Query: 359 DEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVF 418
           D  TY+ ++G   +  +      L D M++    P+VVT++ L+  Y  A  +++A  + 
Sbjct: 475 DVITYSCLIGGFCKLERIDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLL 534

Query: 419 KQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKA 478
           ++M    C PD  TY +L+D   K G +  A  + K+M   G  P+  TY+ +I+   +A
Sbjct: 535 EEMVASDCSPDVYTYTSLVDGFCKVGRMVEARRVLKRMAKRGCQPNVVTYTALIDAFCRA 594

Query: 479 GHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQ-NAGFEPDKVT 537
           G    A++L  EMV  G  PN++TY  +I       + + A K+   ++ +   + D   
Sbjct: 595 GKPTVAYRLLEEMVGNGVQPNVITYRSLIGGFCGTGDLEEARKILERLERDENCKADMFA 654

Query: 538 YSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAM- 596
           Y ++M+ L   G +  A  +   +++    P   +Y  L+    +   + KA E  E M 
Sbjct: 655 YRVMMDGLCRTGRMSAALELLEAIKQSGTPPRHDIYVALIRGLCQGKELGKAMEVLEEMT 714

Query: 597 LQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGML 632
           L    RPN     +++    R G+  +A  L   +L
Sbjct: 715 LSRKSRPNAEAYEAVIQELAREGRHEEANALADELL 750


>gi|242093812|ref|XP_002437396.1| hypothetical protein SORBIDRAFT_10g026180 [Sorghum bicolor]
 gi|241915619|gb|EER88763.1| hypothetical protein SORBIDRAFT_10g026180 [Sorghum bicolor]
          Length = 786

 Score =  176 bits (447), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 97/298 (32%), Positives = 151/298 (50%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           R AG + D+ T +T++    R           + +   G  P VVTYN L+  +G+A   
Sbjct: 236 RAAGVEPDDFTASTVIAACCRDGLVDEAVAFFEDLKARGHTPCVVTYNALLQVFGKAGNY 295

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
            EAL V K+M+  GC+PD VTY  L   +A+AGF + A      M + GL P+ FTY+ +
Sbjct: 296 TEALRVLKEMEQDGCQPDAVTYNELAGTYARAGFYEEAAKCLDTMTSKGLLPNAFTYNTV 355

Query: 472 INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF 531
           +   G  G +  A  LF +M   GC+PN+ TYN ++ +  K   +   L++  +M  +G 
Sbjct: 356 MTAYGNIGKVDEALALFDQMKKSGCVPNVNTYNFILGMLGKKSRFTVMLEMLGEMSRSGC 415

Query: 532 EPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWE 591
            P++VT++ ++ V G  G  D    V   M+          Y  L+  +G+ G+   A++
Sbjct: 416 TPNRVTWNTMLAVCGKRGMEDYVTRVLEGMKSCGVELSRDTYNTLIAAYGRCGSRTNAFK 475

Query: 592 WYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSC 649
            Y  M  AG  P + T N+LL+   R G  S A  ++  M   G KP+ Q+Y+LLL C
Sbjct: 476 MYNEMTSAGFAPCLTTYNALLNVLSRQGDWSTAQSIVSKMRTKGFKPNDQSYSLLLQC 533



 Score =  160 bits (404), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 100/346 (28%), Positives = 166/346 (47%), Gaps = 5/346 (1%)

Query: 307 QWKWGPLAEEALGNTNYSMDAYQANQVLKQLQ---DHTVALGFFNWLRRQAGFKHDEHTY 363
            W+W  LA         + DA     V++ L     H       + +    G + D   Y
Sbjct: 118 HWEWA-LALLRWAGAEGAADASALEMVVRALGREGQHDAVCALLDEMPLPPGSRLDVRAY 176

Query: 364 TTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGR-ANYLNEALDVFKQMQ 422
           TT++  L RA ++    +L  ++ R G  P +VTYN ++  YGR        + +  +M+
Sbjct: 177 TTVLHALSRAGRYERAVELFAELRRQGVAPTLVTYNVVLDVYGRMGRSWPRIVALLDEMR 236

Query: 423 VVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQ 482
             G EPD  T  T+I    + G +D A+  ++ ++A G +P   TY+ ++   GKAG+  
Sbjct: 237 AAGVEPDDFTASTVIAACCRDGLVDEAVAFFEDLKARGHTPCVVTYNALLQVFGKAGNYT 296

Query: 483 AAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVM 542
            A ++  EM   GC P+ VTYN +    A+A  Y+ A K    M + G  P+  TY+ VM
Sbjct: 297 EALRVLKEMEQDGCQPDAVTYNELAGTYARAGFYEEAAKCLDTMTSKGLLPNAFTYNTVM 356

Query: 543 EVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLR 602
              G+ G +DEA A+F +M++   VP+   Y  ++ + GK        E    M ++G  
Sbjct: 357 TAYGNIGKVDEALALFDQMKKSGCVPNVNTYNFILGMLGKKSRFTVMLEMLGEMSRSGCT 416

Query: 603 PNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
           PN  T N++L+   + G       +L+GM + G++ S  TY  L++
Sbjct: 417 PNRVTWNTMLAVCGKRGMEDYVTRVLEGMKSCGVELSRDTYNTLIA 462



 Score =  146 bits (368), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 115/439 (26%), Positives = 185/439 (42%), Gaps = 82/439 (18%)

Query: 294 TGNVVESV-SRILRQWKWGPLAEEALGNTNYSMDAYQANQVLKQ-----LQDHTVALGFF 347
           T NVV  V  R+ R W       + +       D + A+ V+       L D  VA  FF
Sbjct: 210 TYNVVLDVYGRMGRSWPRIVALLDEMRAAGVEPDDFTASTVIAACCRDGLVDEAVA--FF 267

Query: 348 NWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGR 407
             L+ + G      TY  ++ + G+A  +    ++L +M +DGCQP+ VTYN L  +Y R
Sbjct: 268 EDLKAR-GHTPCVVTYNALLQVFGKAGNYTEALRVLKEMEQDGCQPDAVTYNELAGTYAR 326

Query: 408 ANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFT 467
           A +  EA      M   G  P+  TY T++  +   G +D A+ ++ +M+ +G  P+  T
Sbjct: 327 AGFYEEAAKCLDTMTSKGLLPNAFTYNTVMTAYGNIGKVDEALALFDQMKKSGCVPNVNT 386

Query: 468 YSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAK--ARNY--------- 516
           Y+ I+  LGK        ++  EM   GC PN VT+N M+A+  K    +Y         
Sbjct: 387 YNFILGMLGKKSRFTVMLEMLGEMSRSGCTPNRVTWNTMLAVCGKRGMEDYVTRVLEGMK 446

Query: 517 ------------------------QSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLD 552
                                    +A K+Y +M +AGF P   TY+ ++ VL   G   
Sbjct: 447 SCGVELSRDTYNTLIAAYGRCGSRTNAFKMYNEMTSAGFAPCLTTYNALLNVLSRQGDWS 506

Query: 553 EAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGN---------------VRKAWEWYEAML 597
            A+++ ++MR K + P++  Y LL+  + K GN               V  +W     ++
Sbjct: 507 TAQSIVSKMRTKGFKPNDQSYSLLLQCYAKGGNIAGIDAIEKEVYGGTVFPSWVILRTLV 566

Query: 598 QA--------------------GLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLK 637
            A                    G  P++   NS+LS + + G  S    +   +   GL 
Sbjct: 567 IANFKCRRLGGIEKAFQEVKARGYNPDLVIFNSMLSMYAKNGMYSKVTEIFDSIKQSGLS 626

Query: 638 PSLQTYTLLLSC---CTEA 653
           P L TY  L+     C+E+
Sbjct: 627 PDLITYNSLMDMYAKCSES 645



 Score =  142 bits (358), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 87/310 (28%), Positives = 152/310 (49%), Gaps = 4/310 (1%)

Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQM-VRDGCQPNVVTYNRL 401
           AL    W   +     D      +V  LGR  Q  A+  LLD+M +  G + +V  Y  +
Sbjct: 122 ALALLRWAGAEGA--ADASALEMVVRALGREGQHDAVCALLDEMPLPPGSRLDVRAYTTV 179

Query: 402 IHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAG-FLDVAMDMYKKMQAAG 460
           +H+  RA     A+++F +++  G  P  VTY  ++D++ + G      + +  +M+AAG
Sbjct: 180 LHALSRAGRYERAVELFAELRRQGVAPTLVTYNVVLDVYGRMGRSWPRIVALLDEMRAAG 239

Query: 461 LSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSAL 520
           + PD FT S +I    + G +  A   F ++  +G  P +VTYN ++ +  KA NY  AL
Sbjct: 240 VEPDDFTASTVIAACCRDGLVDEAVAFFEDLKARGHTPCVVTYNALLQVFGKAGNYTEAL 299

Query: 521 KLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLW 580
           ++ ++M+  G +PD VTY+ +       G+ +EA      M  K  +P+   Y  ++  +
Sbjct: 300 RVLKEMEQDGCQPDAVTYNELAGTYARAGFYEEAAKCLDTMTSKGLLPNAFTYNTVMTAY 359

Query: 581 GKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSL 640
           G  G V +A   ++ M ++G  PNV T N +L    +  + +    +L  M   G  P+ 
Sbjct: 360 GNIGKVDEALALFDQMKKSGCVPNVNTYNFILGMLGKKSRFTVMLEMLGEMSRSGCTPNR 419

Query: 641 QTYTLLLSCC 650
            T+  +L+ C
Sbjct: 420 VTWNTMLAVC 429



 Score =  139 bits (349), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 98/387 (25%), Positives = 185/387 (47%), Gaps = 26/387 (6%)

Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLI 402
           AL  F+ +++ +G   + +TY  ++G+LG+  +F  + ++L +M R GC PN VT+N ++
Sbjct: 368 ALALFDQMKK-SGCVPNVNTYNFILGMLGKKSRFTVMLEMLGEMSRSGCTPNRVTWNTML 426

Query: 403 HSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLS 462
              G+    +    V + M+  G E  R TY TLI  + + G    A  MY +M +AG +
Sbjct: 427 AVCGKRGMEDYVTRVLEGMKSCGVELSRDTYNTLIAAYGRCGSRTNAFKMYNEMTSAGFA 486

Query: 463 PDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKL 522
           P   TY+ ++N L + G    A  +  +M  +G  PN  +Y++++   AK  N      +
Sbjct: 487 PCLTTYNALLNVLSRQGDWSTAQSIVSKMRTKGFKPNDQSYSLLLQCYAKGGNIAGIDAI 546

Query: 523 YRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGK 582
            +++      P  V    ++     C  L   E  F E++ + + PD  ++  ++ ++ K
Sbjct: 547 EKEVYGGTVFPSWVILRTLVIANFKCRRLGGIEKAFQEVKARGYNPDLVIFNSMLSMYAK 606

Query: 583 AGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQT 642
            G   K  E ++++ Q+GL P++ T NSL+  + +  +  +A  +L  + +  +KP + +
Sbjct: 607 NGMYSKVTEIFDSIKQSGLSPDLITYNSLMDMYAKCSESWEAEKILNQLKSSQVKPDVVS 666

Query: 643 YTLLLSCCTEARSPYDMGFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDH--VGSFLEM 700
           Y  +++           GFC + +      A   L  M + G     V  H  VG +  +
Sbjct: 667 YNTVIN-----------GFCKQGLI---KEAQRILSEMIADGMAPCVVTYHTLVGGYASL 712

Query: 701 -MHSEDRESKRGLVDAVVDFLHKSGLK 726
            M SE RE        V++++ +  LK
Sbjct: 713 EMFSEARE--------VINYMIQHNLK 731



 Score = 91.3 bits (225), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 45/190 (23%), Positives = 97/190 (51%)

Query: 372 RARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRV 431
           + R+ G I K   ++   G  P++V +N ++  Y +    ++  ++F  ++  G  PD +
Sbjct: 571 KCRRLGGIEKAFQEVKARGYNPDLVIFNSMLSMYAKNGMYSKVTEIFDSIKQSGLSPDLI 630

Query: 432 TYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEM 491
           TY +L+D++AK      A  +  +++++ + PD  +Y+ +IN   K G ++ A ++  EM
Sbjct: 631 TYNSLMDMYAKCSESWEAEKILNQLKSSQVKPDVVSYNTVINGFCKQGLIKEAQRILSEM 690

Query: 492 VNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYL 551
           +  G  P +VTY+ ++   A    +  A ++   M     +P ++TY  V++        
Sbjct: 691 IADGMAPCVVTYHTLVGGYASLEMFSEAREVINYMIQHNLKPMELTYRRVVDSYCKAKRF 750

Query: 552 DEAEAVFAEM 561
           +EA +  +E+
Sbjct: 751 EEARSFLSEV 760



 Score = 88.6 bits (218), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 66/312 (21%), Positives = 130/312 (41%), Gaps = 35/312 (11%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           +  G +    TY T++   GR        K+ ++M   G  P + TYN L++   R    
Sbjct: 446 KSCGVELSRDTYNTLIAAYGRCGSRTNAFKMYNEMTSAGFAPCLTTYNALLNVLSRQGDW 505

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAK----AGFLDVAMDMY-------------- 453
           + A  +  +M+  G +P+  +Y  L+  +AK    AG   +  ++Y              
Sbjct: 506 STAQSIVSKMRTKGFKPNDQSYSLLLQCYAKGGNIAGIDAIEKEVYGGTVFPSWVILRTL 565

Query: 454 -----------------KKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGC 496
                            ++++A G +PD   ++ +++   K G      ++F  +   G 
Sbjct: 566 VIANFKCRRLGGIEKAFQEVKARGYNPDLVIFNSMLSMYAKNGMYSKVTEIFDSIKQSGL 625

Query: 497 IPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEA 556
            P+L+TYN ++ + AK      A K+   ++++  +PD V+Y+ V+      G + EA+ 
Sbjct: 626 SPDLITYNSLMDMYAKCSESWEAEKILNQLKSSQVKPDVVSYNTVINGFCKQGLIKEAQR 685

Query: 557 VFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFL 616
           + +EM      P    Y  LV  +       +A E    M+Q  L+P   T   ++ ++ 
Sbjct: 686 ILSEMIADGMAPCVVTYHTLVGGYASLEMFSEAREVINYMIQHNLKPMELTYRRVVDSYC 745

Query: 617 RVGQLSDAYHLL 628
           +  +  +A   L
Sbjct: 746 KAKRFEEARSFL 757



 Score = 82.4 bits (202), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 57/257 (22%), Positives = 116/257 (45%), Gaps = 1/257 (0%)

Query: 333 VLKQLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQ 392
           VL +  D + A    + +R + GFK ++ +Y+ ++    +      I+ +  ++      
Sbjct: 498 VLSRQGDWSTAQSIVSKMRTK-GFKPNDQSYSLLLQCYAKGGNIAGIDAIEKEVYGGTVF 556

Query: 393 PNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDM 452
           P+ V    L+ +  +   L      F++++  G  PD V + +++ ++AK G      ++
Sbjct: 557 PSWVILRTLVIANFKCRRLGGIEKAFQEVKARGYNPDLVIFNSMLSMYAKNGMYSKVTEI 616

Query: 453 YKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAK 512
           +  ++ +GLSPD  TY+ +++   K      A ++  ++ +    P++V+YN +I    K
Sbjct: 617 FDSIKQSGLSPDLITYNSLMDMYAKCSESWEAEKILNQLKSSQVKPDVVSYNTVINGFCK 676

Query: 513 ARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPV 572
               + A ++  +M   G  P  VTY  ++          EA  V   M + N  P E  
Sbjct: 677 QGLIKEAQRILSEMIADGMAPCVVTYHTLVGGYASLEMFSEAREVINYMIQHNLKPMELT 736

Query: 573 YGLLVDLWGKAGNVRKA 589
           Y  +VD + KA    +A
Sbjct: 737 YRRVVDSYCKAKRFEEA 753



 Score = 71.6 bits (174), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 53/219 (24%), Positives = 98/219 (44%), Gaps = 10/219 (4%)

Query: 464 DTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIP-----NLVTYNIMIALQAKARNYQS 518
           D     +++  LG+ G     H   C ++++  +P     ++  Y  ++   ++A  Y+ 
Sbjct: 136 DASALEMVVRALGREGQ----HDAVCALLDEMPLPPGSRLDVRAYTTVLHALSRAGRYER 191

Query: 519 ALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGY-LDEAEAVFAEMRRKNWVPDEPVYGLLV 577
           A++L+ +++  G  P  VTY++V++V G  G       A+  EMR     PD+     ++
Sbjct: 192 AVELFAELRRQGVAPTLVTYNVVLDVYGRMGRSWPRIVALLDEMRAAGVEPDDFTASTVI 251

Query: 578 DLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLK 637
               + G V +A  ++E +   G  P V T N+LL  F + G  ++A  +L+ M   G +
Sbjct: 252 AACCRDGLVDEAVAFFEDLKARGHTPCVVTYNALLQVFGKAGNYTEALRVLKEMEQDGCQ 311

Query: 638 PSLQTYTLLLSCCTEARSPYDMGFCHELMAVSGHPAHMF 676
           P   TY  L      A    +   C + M   G   + F
Sbjct: 312 PDAVTYNELAGTYARAGFYEEAAKCLDTMTSKGLLPNAF 350



 Score = 62.8 bits (151), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 35/140 (25%), Positives = 65/140 (46%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           +Q+G   D  TY +++ +  +  +     K+L+Q+     +P+VV+YN +I+ + +   +
Sbjct: 621 KQSGLSPDLITYNSLMDMYAKCSESWEAEKILNQLKSSQVKPDVVSYNTVINGFCKQGLI 680

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
            EA  +  +M   G  P  VTY TL+  +A       A ++   M    L P   TY  +
Sbjct: 681 KEAQRILSEMIADGMAPCVVTYHTLVGGYASLEMFSEAREVINYMIQHNLKPMELTYRRV 740

Query: 472 INCLGKAGHLQAAHQLFCEM 491
           ++   KA   + A     E+
Sbjct: 741 VDSYCKAKRFEEARSFLSEV 760


>gi|302781562|ref|XP_002972555.1| hypothetical protein SELMODRAFT_97527 [Selaginella moellendorffii]
 gi|300160022|gb|EFJ26641.1| hypothetical protein SELMODRAFT_97527 [Selaginella moellendorffii]
          Length = 564

 Score =  176 bits (446), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 120/405 (29%), Positives = 196/405 (48%), Gaps = 17/405 (4%)

Query: 385 QMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAG 444
           +M RDG  P +VTYN +I+   ++N L   +++F+++   G  PD VTY TLID   KAG
Sbjct: 27  EMARDGVAPTIVTYNTIINGLCKSNDLGAGMELFEELVERGHHPDVVTYNTLIDSLCKAG 86

Query: 445 FLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGC--IPNLVT 502
            L+ A  ++  M + G  P+  TYSV+IN L K G +  A +L  EM  + C  +PN++T
Sbjct: 87  DLEEARRLHGDMSSRGCVPNVVTYSVLINGLCKVGRIDEARELIQEMTRKSCDVLPNIIT 146

Query: 503 YNIMIALQAKARNYQSALKLYRDMQNAGFE--PDKVTYSIVMEVLGHCGYLDEAEAVFAE 560
           YN  +    K      A +L R +++      PD VT+S +++ L  CG +DEA +VF +
Sbjct: 147 YNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQIDEACSVFDD 206

Query: 561 MRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQ 620
           M    +VP+   Y  LV+   KA  + +A    E+M+  G+ P+V T + L+ AF +  +
Sbjct: 207 MIAGGYVPNVITYNALVNGLCKADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASR 266

Query: 621 LSDAYHLLQGMLNLGLKPSLQ-----TYTLLLS-CCTEARSPYDMGFCHELMAVSGHPAH 674
           + +A  LL GM + G  P++      T+ +L++  C             E++A +  P  
Sbjct: 267 VDEALELLHGMASRGCTPNVLVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNLQPDV 326

Query: 675 MF---LLSMPSPGPDGQNVRDHVGSFLEMMHSEDRESKRGLVDAVVDFLHKSGLKEEAGS 731
           M    L+         +  RD     L++M +          +A+V  L KSG  EEA  
Sbjct: 327 MTFGALIDGLCKAGQVEAARD----ILDLMGNLGVPPNVVTYNALVHGLCKSGRIEEACQ 382

Query: 732 VWEVAAQKNVYPDAVKEKGMSYWLINLHVMSDGTAVIALSRTLAW 776
             E        PD++    + Y L       D   +++  ++  W
Sbjct: 383 FLEEMVSSGCVPDSITYGSLVYALCRASRTDDALQLVSELKSFGW 427



 Score =  170 bits (431), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 116/421 (27%), Positives = 200/421 (47%), Gaps = 19/421 (4%)

Query: 362 TYTTMVGILGRARQFGAINKLLDQMVRDGCQ--PNVVTYNRLIHSYGRANYLNEALDVFK 419
           TY+ ++  L +  +     +L+ +M R  C   PN++TYN  +    + +   EA ++ +
Sbjct: 109 TYSVLINGLCKVGRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMR 168

Query: 420 QMQ--VVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGK 477
            ++   +   PD VT+ TLID   K G +D A  ++  M A G  P+  TY+ ++N L K
Sbjct: 169 SLRDGSLRVSPDTVTFSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCK 228

Query: 478 AGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAG-----FE 532
           A  ++ AH +   MV++G  P+++TY++++    KA     AL+L   M + G       
Sbjct: 229 ADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVLV 288

Query: 533 PDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEW 592
           PDKVT++I++      G  ++A A+F EM  KN  PD   +G L+D   KAG V  A + 
Sbjct: 289 PDKVTFNILIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDI 348

Query: 593 YEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTY-TLLLSCCT 651
            + M   G+ PNV T N+L+    + G++ +A   L+ M++ G  P   TY +L+ + C 
Sbjct: 349 LDLMGNLGVPPNVVTYNALVHGLCKSGRIEEACQFLEEMVSSGCVPDSITYGSLVYALCR 408

Query: 652 EARSPYDMGFCHELMAVSGHPA----HMFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRE 707
            +R+   +    EL +    P     ++ +  +   G   Q +     + LE M  +  +
Sbjct: 409 ASRTDDALQLVSELKSFGWDPDTVTYNILVDGLWKSGKTEQAI-----TVLEEMVGKGHQ 463

Query: 708 SKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAVKEKGMSYWLINLHVMSDGTAV 767
                  A    LH+SG       +  V   K + PDA     +  W+     + D  A+
Sbjct: 464 PDSFTFAACFSGLHRSGNLAGTMELLRVVLAKGMLPDATTCSSILDWVCRSGKLDDVKAM 523

Query: 768 I 768
           I
Sbjct: 524 I 524



 Score =  161 bits (408), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 129/465 (27%), Positives = 205/465 (44%), Gaps = 58/465 (12%)

Query: 332 QVLKQLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGC 391
           Q L +  D   AL  F     + G      TY T++  L ++   GA  +L +++V  G 
Sbjct: 9   QSLCRAGDTARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNDLGAGMELFEELVERGH 68

Query: 392 QPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMD 451
            P+VVTYN LI S  +A  L EA  +   M   GC P+ VTY  LI+   K G +D A +
Sbjct: 69  HPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRGCVPNVVTYSVLINGLCKVGRIDEARE 128

Query: 452 MYKKM----------------------------QAAGL-----------SPDTFTYSVII 472
           + ++M                            +A  L           SPDT T+S +I
Sbjct: 129 LIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDTVTFSTLI 188

Query: 473 NCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFE 532
           + L K G +  A  +F +M+  G +PN++TYN ++    KA   + A  +   M + G  
Sbjct: 189 DGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADKMERAHAMIESMVDKGVT 248

Query: 533 PDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKN-----WVPDEPVYGLLVDLWGKAGNVR 587
           PD +TYS++++       +DEA  +   M  +       VPD+  + +L+    KAGN  
Sbjct: 249 PDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVLVPDKVTFNILIAGACKAGNFE 308

Query: 588 KAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
           +A   +E M+   L+P+V T  +L+    + GQ+  A  +L  M NLG+ P++ TY  L+
Sbjct: 309 QASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNALV 368

Query: 648 -SCCTEARSPYDMGFCHELMAVSGHP------AHMFLLSMPSPGPDGQNVRDHVGSFLEM 700
              C   R      F  E+++    P      + ++ L   S   D   +   + SF   
Sbjct: 369 HGLCKSGRIEEACQFLEEMVSSGCVPDSITYGSLVYALCRASRTDDALQLVSELKSF--- 425

Query: 701 MHSEDRESKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDA 745
                 +      + +VD L KSG  E+A +V E    K   PD+
Sbjct: 426 ----GWDPDTVTYNILVDGLWKSGKTEQAITVLEEMVGKGHQPDS 466



 Score =  153 bits (387), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 93/300 (31%), Positives = 157/300 (52%), Gaps = 7/300 (2%)

Query: 354 AGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNE 413
            G+  +  TY  +V  L +A +    + +++ MV  G  P+V+TY+ L+ ++ +A+ ++E
Sbjct: 210 GGYVPNVITYNALVNGLCKADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDE 269

Query: 414 ALDVFKQMQVVGCEP-----DRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTY 468
           AL++   M   GC P     D+VT+  LI    KAG  + A  ++++M A  L PD  T+
Sbjct: 270 ALELLHGMASRGCTPNVLVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNLQPDVMTF 329

Query: 469 SVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQN 528
             +I+ L KAG ++AA  +   M N G  PN+VTYN ++    K+   + A +   +M +
Sbjct: 330 GALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNALVHGLCKSGRIEEACQFLEEMVS 389

Query: 529 AGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVD-LWGKAGNVR 587
           +G  PD +TY  ++  L      D+A  + +E++   W PD   Y +LVD LW K+G   
Sbjct: 390 SGCVPDSITYGSLVYALCRASRTDDALQLVSELKSFGWDPDTVTYNILVDGLW-KSGKTE 448

Query: 588 KAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
           +A    E M+  G +P+  T  +  S   R G L+    LL+ +L  G+ P   T + +L
Sbjct: 449 QAITVLEEMVGKGHQPDSFTFAACFSGLHRSGNLAGTMELLRVVLAKGMLPDATTCSSIL 508



 Score =  149 bits (377), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 86/280 (30%), Positives = 145/280 (51%), Gaps = 5/280 (1%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNV-----VTYNRLIHSYGRAN 409
           G   D  TY+ +V    +A +     +LL  M   GC PNV     VT+N LI    +A 
Sbjct: 246 GVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVLVPDKVTFNILIAGACKAG 305

Query: 410 YLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYS 469
              +A  +F++M     +PD +T+  LID   KAG ++ A D+   M   G+ P+  TY+
Sbjct: 306 NFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYN 365

Query: 470 VIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNA 529
            +++ L K+G ++ A Q   EMV+ GC+P+ +TY  ++    +A     AL+L  ++++ 
Sbjct: 366 ALVHGLCKSGRIEEACQFLEEMVSSGCVPDSITYGSLVYALCRASRTDDALQLVSELKSF 425

Query: 530 GFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKA 589
           G++PD VTY+I+++ L   G  ++A  V  EM  K   PD   +        ++GN+   
Sbjct: 426 GWDPDTVTYNILVDGLWKSGKTEQAITVLEEMVGKGHQPDSFTFAACFSGLHRSGNLAGT 485

Query: 590 WEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQ 629
            E    +L  G+ P+  TC+S+L    R G+L D   +++
Sbjct: 486 MELLRVVLAKGMLPDATTCSSILDWVCRSGKLDDVKAMIK 525



 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 86/295 (29%), Positives = 141/295 (47%), Gaps = 5/295 (1%)

Query: 359 DEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVF 418
           D  T++T++  L +  Q      + D M+  G  PNV+TYN L++   +A+ +  A  + 
Sbjct: 180 DTVTFSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADKMERAHAMI 239

Query: 419 KQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAG-----LSPDTFTYSVIIN 473
           + M   G  PD +TY  L+D   KA  +D A+++   M + G     L PD  T++++I 
Sbjct: 240 ESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVLVPDKVTFNILIA 299

Query: 474 CLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEP 533
              KAG+ + A  LF EMV +   P+++T+  +I    KA   ++A  +   M N G  P
Sbjct: 300 GACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPP 359

Query: 534 DKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWY 593
           + VTY+ ++  L   G ++EA     EM     VPD   YG LV    +A     A +  
Sbjct: 360 NVVTYNALVHGLCKSGRIEEACQFLEEMVSSGCVPDSITYGSLVYALCRASRTDDALQLV 419

Query: 594 EAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
             +   G  P+  T N L+    + G+   A  +L+ M+  G +P   T+    S
Sbjct: 420 SELKSFGWDPDTVTYNILVDGLWKSGKTEQAITVLEEMVGKGHQPDSFTFAACFS 474



 Score =  107 bits (267), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 61/207 (29%), Positives = 107/207 (51%)

Query: 356 FKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEAL 415
            + D  T+  ++  L +A Q  A   +LD M   G  PNVVTYN L+H   ++  + EA 
Sbjct: 322 LQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNALVHGLCKSGRIEEAC 381

Query: 416 DVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCL 475
              ++M   GC PD +TY +L+    +A   D A+ +  ++++ G  PDT TY+++++ L
Sbjct: 382 QFLEEMVSSGCVPDSITYGSLVYALCRASRTDDALQLVSELKSFGWDPDTVTYNILVDGL 441

Query: 476 GKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDK 535
            K+G  + A  +  EMV +G  P+  T+    +   ++ N    ++L R +   G  PD 
Sbjct: 442 WKSGKTEQAITVLEEMVGKGHQPDSFTFAACFSGLHRSGNLAGTMELLRVVLAKGMLPDA 501

Query: 536 VTYSIVMEVLGHCGYLDEAEAVFAEMR 562
            T S +++ +   G LD+ +A+  E  
Sbjct: 502 TTCSSILDWVCRSGKLDDVKAMIKEFE 528



 Score = 54.3 bits (129), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 36/137 (26%), Positives = 67/137 (48%)

Query: 354 AGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNE 413
           +G   D  TY ++V  L RA +     +L+ ++   G  P+ VTYN L+    ++    +
Sbjct: 390 SGCVPDSITYGSLVYALCRASRTDDALQLVSELKSFGWDPDTVTYNILVDGLWKSGKTEQ 449

Query: 414 ALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIIN 473
           A+ V ++M   G +PD  T+        ++G L   M++ + + A G+ PD  T S I++
Sbjct: 450 AITVLEEMVGKGHQPDSFTFAACFSGLHRSGNLAGTMELLRVVLAKGMLPDATTCSSILD 509

Query: 474 CLGKAGHLQAAHQLFCE 490
            + ++G L     +  E
Sbjct: 510 WVCRSGKLDDVKAMIKE 526


>gi|224058846|ref|XP_002299640.1| predicted protein [Populus trichocarpa]
 gi|222846898|gb|EEE84445.1| predicted protein [Populus trichocarpa]
          Length = 609

 Score =  176 bits (446), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 134/477 (28%), Positives = 224/477 (46%), Gaps = 6/477 (1%)

Query: 272 SKPSREMKIPAGLAPFSRHFASTGNVVESVSRILRQWKWGPLAEEALGNTNYSMDAYQAN 331
           SK      +P   + FSR   S   + E   RIL+ +KWGP AE+AL      +D     
Sbjct: 7   SKDDEMQNLPTQNSKFSRRDPSVRTLDERFIRILKIFKWGPDAEKALEVLKLKVDHRLVR 66

Query: 332 QVLKQLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRD-G 390
           +VLK   +  V + FF W  ++  F+HD  TY  ++  L     FG + K++ +MVR   
Sbjct: 67  EVLKIDVEINVKIQFFKWAGKRRNFEHDLTTYMPLIRCLDDCGLFGEMWKMIQEMVRSPT 126

Query: 391 CQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAM 450
           C       + ++   G+A  +N+AL VF Q++   C+P   TY ++I +  + G  +   
Sbjct: 127 CVIGPADLSEVVKILGKAKMVNKALSVFYQIKSRKCKPTASTYNSMILMLMQEGHHEKIH 186

Query: 451 DMYKKMQAAG-LSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIAL 509
           ++Y +M   G   PDT TYSV+++   K G    A +LF EM   G  P    Y  ++A+
Sbjct: 187 ELYHEMCNEGDCFPDTMTYSVLVSAFVKLGRDDYAIRLFDEMKANGLHPTAKIYTTLLAI 246

Query: 510 QAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPD 569
             K+ + + AL L ++M++ G  P   TY+ +++ LG  G +++A +VF  M +    PD
Sbjct: 247 YFKSGD-EKALGLVQEMKDKGCAPTVFTYTELIKGLGKSGRVEDAYSVFLNMLKDGCKPD 305

Query: 570 EPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSA-FLRVGQLSDAYHLL 628
             +   L++++GKAG +  A + ++ M      PNV T N+++ A F      S+A    
Sbjct: 306 VVLINNLINIFGKAGRLEDALKLFDQMRSLKCAPNVVTYNTVIKALFESKAPASEAASWF 365

Query: 629 QGMLNLGLKPSLQTYTLLLS-CCTEARSPYDMGFCHELMAVSGHPAHMFLLSMPSPGPDG 687
           + M   G+ PS  TY++L+   C   R    +    E+      P      S+ +     
Sbjct: 366 EKMKANGVTPSSFTYSILIDGFCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKA 425

Query: 688 QNVRDHVGSFLEMMHSEDRESKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPD 744
           +        FLE+  +  R S R +   ++  L K G   EA  ++    +    PD
Sbjct: 426 KRYEAANELFLELKENCGRSSAR-IYAVMIKNLGKCGRPSEAVDLFNEMKKIGCNPD 481



 Score =  147 bits (371), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 93/308 (30%), Positives = 165/308 (53%), Gaps = 6/308 (1%)

Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLI 402
           ALG    ++ + G      TYT ++  LG++ +      +   M++DGC+P+VV  N LI
Sbjct: 255 ALGLVQEMKDK-GCAPTVFTYTELIKGLGKSGRVEDAYSVFLNMLKDGCKPDVVLINNLI 313

Query: 403 HSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLID--IHAKAGFLDVAMDMYKKMQAAG 460
           + +G+A  L +AL +F QM+ + C P+ VTY T+I     +KA   + A   ++KM+A G
Sbjct: 314 NIFGKAGRLEDALKLFDQMRSLKCAPNVVTYNTVIKALFESKAPASEAA-SWFEKMKANG 372

Query: 461 LSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSAL 520
           ++P +FTYS++I+   K   ++ A  L  EM  +G  P    Y  +I    KA+ Y++A 
Sbjct: 373 VTPSSFTYSILIDGFCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAAN 432

Query: 521 KLYRDM-QNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDL 579
           +L+ ++ +N G    ++ Y+++++ LG CG   EA  +F EM++    PD   Y  L+  
Sbjct: 433 ELFLELKENCGRSSARI-YAVMIKNLGKCGRPSEAVDLFNEMKKIGCNPDVYAYNALMSG 491

Query: 580 WGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPS 639
             +AG + +A+     M + G  P++ + N +L+   R G+   A  +   M +  +KP 
Sbjct: 492 LVRAGMIEEAFSALRTMEENGCTPDLNSHNIILNGLARTGRPEQATEMFMKMKDSLIKPD 551

Query: 640 LQTYTLLL 647
             +Y  +L
Sbjct: 552 AVSYNTIL 559



 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 89/308 (28%), Positives = 151/308 (49%), Gaps = 5/308 (1%)

Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLI 402
           A+  F+ ++   G       YTT++ I  ++    A+  L+ +M   GC P V TY  LI
Sbjct: 221 AIRLFDEMKAN-GLHPTAKIYTTLLAIYFKSGDEKALG-LVQEMKDKGCAPTVFTYTELI 278

Query: 403 HSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLS 462
              G++  + +A  VF  M   GC+PD V    LI+I  KAG L+ A+ ++ +M++   +
Sbjct: 279 KGLGKSGRVEDAYSVFLNMLKDGCKPDVVLINNLINIFGKAGRLEDALKLFDQMRSLKCA 338

Query: 463 PDTFTYSVIINCL--GKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSAL 520
           P+  TY+ +I  L   KA   +AA   F +M   G  P+  TY+I+I    K    + AL
Sbjct: 339 PNVVTYNTVIKALFESKAPASEAA-SWFEKMKANGVTPSSFTYSILIDGFCKTNRVEKAL 397

Query: 521 KLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLW 580
            L  +M   GF P    Y  ++  LG     + A  +F E++         +Y +++   
Sbjct: 398 LLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAANELFLELKENCGRSSARIYAVMIKNL 457

Query: 581 GKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSL 640
           GK G   +A + +  M + G  P+V   N+L+S  +R G + +A+  L+ M   G  P L
Sbjct: 458 GKCGRPSEAVDLFNEMKKIGCNPDVYAYNALMSGLVRAGMIEEAFSALRTMEENGCTPDL 517

Query: 641 QTYTLLLS 648
            ++ ++L+
Sbjct: 518 NSHNIILN 525



 Score =  115 bits (289), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 57/201 (28%), Positives = 113/201 (56%)

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
           + GF      Y +++  LG+A+++ A N+L  ++  +  + +   Y  +I + G+    +
Sbjct: 405 EKGFPPCPAAYCSLINALGKAKRYEAANELFLELKENCGRSSARIYAVMIKNLGKCGRPS 464

Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
           EA+D+F +M+ +GC PD   Y  L+    +AG ++ A    + M+  G +PD  ++++I+
Sbjct: 465 EAVDLFNEMKKIGCNPDVYAYNALMSGLVRAGMIEEAFSALRTMEENGCTPDLNSHNIIL 524

Query: 473 NCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFE 532
           N L + G  + A ++F +M +    P+ V+YN ++   +++  ++ A KL R+M + GFE
Sbjct: 525 NGLARTGRPEQATEMFMKMKDSLIKPDAVSYNTILGSLSRSGMFEEAAKLMREMGSRGFE 584

Query: 533 PDKVTYSIVMEVLGHCGYLDE 553
            D +TYS ++E +G     DE
Sbjct: 585 YDHITYSSILEAVGKVDEDDE 605



 Score =  107 bits (266), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 82/311 (26%), Positives = 133/311 (42%), Gaps = 38/311 (12%)

Query: 346 FFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSY 405
           F N L+   G K D      ++ I G+A +     KL DQM    C PNVVTYN +I + 
Sbjct: 294 FLNMLKD--GCKPDVVLINNLINIFGKAGRLEDALKLFDQMRSLKCAPNVVTYNTVIKAL 351

Query: 406 GRANY-LNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPD 464
             +    +EA   F++M+  G  P   TY  LID   K   ++ A+ + ++M   G  P 
Sbjct: 352 FESKAPASEAASWFEKMKANGVTPSSFTYSILIDGFCKTNRVEKALLLLEEMDEKGFPPC 411

Query: 465 TFTYSVIINCLGKAGHLQAAHQLFCE---------------------------------- 490
              Y  +IN LGKA   +AA++LF E                                  
Sbjct: 412 PAAYCSLINALGKAKRYEAANELFLELKENCGRSSARIYAVMIKNLGKCGRPSEAVDLFN 471

Query: 491 -MVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCG 549
            M   GC P++  YN +++   +A   + A    R M+  G  PD  +++I++  L   G
Sbjct: 472 EMKKIGCNPDVYAYNALMSGLVRAGMIEEAFSALRTMEENGCTPDLNSHNIILNGLARTG 531

Query: 550 YLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCN 609
             ++A  +F +M+     PD   Y  ++    ++G   +A +    M   G   +  T +
Sbjct: 532 RPEQATEMFMKMKDSLIKPDAVSYNTILGSLSRSGMFEEAAKLMREMGSRGFEYDHITYS 591

Query: 610 SLLSAFLRVGQ 620
           S+L A  +V +
Sbjct: 592 SILEAVGKVDE 602


>gi|357502623|ref|XP_003621600.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355496615|gb|AES77818.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 890

 Score =  175 bits (444), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 138/521 (26%), Positives = 239/521 (45%), Gaps = 45/521 (8%)

Query: 359 DEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVF 418
           D  TY T +  L +A Q     ++ ++M      PNVVTY+ ++  Y +AN L +AL+++
Sbjct: 353 DVFTYNTYLDTLCKAGQIDLARRVFEEMSSKRVWPNVVTYSAMMDGYAKANLLEDALNLY 412

Query: 419 KQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKA 478
           ++M++     DRV+Y TL+ I+ K G LD A++  K+M+ +G++ D  TY+ +++  GK 
Sbjct: 413 EEMKLRSVCLDRVSYNTLVGIYEKLGNLDEAIEKCKEMERSGINRDVVTYNALLSGYGKH 472

Query: 479 GHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTY 538
           G      +LF EM  +   PN +TY+ MI +  K   +Q A+ +YR+ + A  E D V Y
Sbjct: 473 GMYDEVRRLFEEMKARNIYPNTLTYSTMIDMYTKGEMFQEAMDVYREFKMARLEIDVVFY 532

Query: 539 SIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVD-----------LWGKAGNVR 587
           S +++ L   G ++ +  +   M  K   P+   +  ++D           + G +  + 
Sbjct: 533 SAIIDTLCKNGLMESSIMLLMAMMEKGIKPNVVTFNSIIDASQQSPTLEYGVNGSSDAID 592

Query: 588 KAWEWYEAMLQAGLRPNVPTCNSLLSAFLRV-----GQLSD----------AYHLLQGML 632
              E    ++  G   N P  + +L  F ++     G L               L Q M 
Sbjct: 593 YPIEQSSPIVIDGAFQNKPGEDRILKMFEQLAAEKAGHLKKNRSGRQDKHCILWLFQKMH 652

Query: 633 NLGLKPSLQTYTLLLSCCTEARSPYDMGFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRD 692
            L +KP++ T++ +L+ C+   S  D     + + +  +  +     +          R+
Sbjct: 653 ELNIKPNVVTFSAILNACSLCNSYEDASLLLDTLRLFDNQVYGVTNGLL------MGYRE 706

Query: 693 HVGSFLEMMHSE----DRESKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAVKE 748
            V    E +  E    D  +     +A+ D L   G K  A  V     ++NV+      
Sbjct: 707 QVWLSAETLFDELMCMDPSTSSAFYNALTDMLWHFGQKRGAEMVVIEGRRRNVW------ 760

Query: 749 KG-MSYWLINLHVMSDGTAVIALSRTLAWFRKQMLISGVG-PSRIDIVTGWGRRSRVTGT 806
           KG  S   ++LH+MS G A  A+  +        L  G+  P  ++I+TGWG+ S+V G 
Sbjct: 761 KGEWSISCLDLHLMSCGAAC-AMVHSWLLSLHSSLFQGIQLPKFVNILTGWGKHSKVLGD 819

Query: 807 SLVRQAVQELLHMFSFPFFTENGNSGCFVGCGEPLNKWLLQ 847
             +++AV+ LL+    PF     N G  V  GE L  WL +
Sbjct: 820 GTLKKAVEALLNGMGSPFRIYENNLGRLVSPGEVLTAWLTK 860



 Score =  146 bits (369), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 92/357 (25%), Positives = 166/357 (46%), Gaps = 37/357 (10%)

Query: 333 VLKQLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQ 392
            L +L +  +ALG F   R + G+    H+++ M+   GR  +F     L   M   G  
Sbjct: 222 TLGRLGEINLALGLFERARLE-GYGSTVHSFSAMISAFGRNGRFPDAVDLFRSMSSWGVV 280

Query: 393 PNVVTYNRLIHSYGRANY-LNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMD 451
           PNV+TYN +I +  +     +  +  + +M   G  PDR+TY +L+ + A  G  ++A  
Sbjct: 281 PNVITYNSIIDAGAKGEVSFDVVVKFYDEMIANGLMPDRLTYNSLLSVCASKGMWEMAQK 340

Query: 452 MYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQA 511
           +  +M    + PD FTY+  ++ L KAG +  A ++F EM ++   PN+VTY+ M+   A
Sbjct: 341 LLSEMDHRCIVPDVFTYNTYLDTLCKAGQIDLARRVFEEMSSKRVWPNVVTYSAMMDGYA 400

Query: 512 KARNYQSALKLY-----------------------------------RDMQNAGFEPDKV 536
           KA   + AL LY                                   ++M+ +G   D V
Sbjct: 401 KANLLEDALNLYEEMKLRSVCLDRVSYNTLVGIYEKLGNLDEAIEKCKEMERSGINRDVV 460

Query: 537 TYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAM 596
           TY+ ++   G  G  DE   +F EM+ +N  P+   Y  ++D++ K    ++A + Y   
Sbjct: 461 TYNALLSGYGKHGMYDEVRRLFEEMKARNIYPNTLTYSTMIDMYTKGEMFQEAMDVYREF 520

Query: 597 LQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEA 653
             A L  +V   ++++    + G +  +  LL  M+  G+KP++ T+  ++    ++
Sbjct: 521 KMARLEIDVVFYSAIIDTLCKNGLMESSIMLLMAMMEKGIKPNVVTFNSIIDASQQS 577



 Score =  138 bits (348), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 83/306 (27%), Positives = 154/306 (50%), Gaps = 1/306 (0%)

Query: 350 LRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRAN 409
           + +Q G        + M+G LGR  +      L ++   +G    V +++ +I ++GR  
Sbjct: 203 MSKQNGRVDKGKLVSAMIGTLGRLGEINLALGLFERARLEGYGSTVHSFSAMISAFGRNG 262

Query: 410 YLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGF-LDVAMDMYKKMQAAGLSPDTFTY 468
              +A+D+F+ M   G  P+ +TY ++ID  AK     DV +  Y +M A GL PD  TY
Sbjct: 263 RFPDAVDLFRSMSSWGVVPNVITYNSIIDAGAKGEVSFDVVVKFYDEMIANGLMPDRLTY 322

Query: 469 SVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQN 528
           + +++     G  + A +L  EM ++  +P++ TYN  +    KA     A +++ +M +
Sbjct: 323 NSLLSVCASKGMWEMAQKLLSEMDHRCIVPDVFTYNTYLDTLCKAGQIDLARRVFEEMSS 382

Query: 529 AGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRK 588
               P+ VTYS +M+       L++A  ++ EM+ ++   D   Y  LV ++ K GN+ +
Sbjct: 383 KRVWPNVVTYSAMMDGYAKANLLEDALNLYEEMKLRSVCLDRVSYNTLVGIYEKLGNLDE 442

Query: 589 AWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
           A E  + M ++G+  +V T N+LLS + + G   +   L + M    + P+  TY+ ++ 
Sbjct: 443 AIEKCKEMERSGINRDVVTYNALLSGYGKHGMYDEVRRLFEEMKARNIYPNTLTYSTMID 502

Query: 649 CCTEAR 654
             T+  
Sbjct: 503 MYTKGE 508



 Score = 41.6 bits (96), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 40/178 (22%), Positives = 76/178 (42%), Gaps = 3/178 (1%)

Query: 576 LVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLG 635
           ++   G+ G +  A   +E     G    V + ++++SAF R G+  DA  L + M + G
Sbjct: 219 MIGTLGRLGEINLALGLFERARLEGYGSTVHSFSAMISAFGRNGRFPDAVDLFRSMSSWG 278

Query: 636 LKPSLQTYTLLLSCCTEARSPYD--MGFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDH 693
           + P++ TY  ++    +    +D  + F  E++A    P  +   S+ S     + + + 
Sbjct: 279 VVPNVITYNSIIDAGAKGEVSFDVVVKFYDEMIANGLMPDRLTYNSLLSVCA-SKGMWEM 337

Query: 694 VGSFLEMMHSEDRESKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAVKEKGM 751
               L  M            +  +D L K+G  + A  V+E  + K V+P+ V    M
Sbjct: 338 AQKLLSEMDHRCIVPDVFTYNTYLDTLCKAGQIDLARRVFEEMSSKRVWPNVVTYSAM 395


>gi|168066970|ref|XP_001785401.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162662982|gb|EDQ49775.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 318

 Score =  175 bits (443), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 97/318 (30%), Positives = 164/318 (51%), Gaps = 3/318 (0%)

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
           + G++H+ +TYT ++ + GRA+ + A+ ++L +M   GC  ++VT++ ++  Y  A  L 
Sbjct: 2   KIGYQHNMYTYTALIDLYGRAKNYEAVEEVLAEMCEVGCDVSIVTFSLVMRWYREAKNLA 61

Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
               V + MQ  GC P+   Y T ID   K    + A+ ++K+M+ +   P+ FTY+V+I
Sbjct: 62  GIRRVLEHMQREGCLPNEYIYTTFIDALDKDTCHEEALAVFKEMRDSNWEPNIFTYNVLI 121

Query: 473 NCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFE 532
           + L  AG L  A ++F  +      PN VTY I++    KA   + A+   + M  AGF 
Sbjct: 122 HSLATAGKLDGAREMFGRLPEPHHRPNFVTYTILVTAHVKAGELEKAVHFLKTMMEAGFM 181

Query: 533 PDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEW 592
           P     SI+   L   G  DE   V   M+ +   P+   Y +L+DL  +  N   A + 
Sbjct: 182 PSHGLRSILFTALMAKGRADE---VLDNMKERGHRPNVYTYSMLIDLLSRTRNHAHALKM 238

Query: 593 YEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTE 652
           Y+ M +A  +PNV T  +L+ +  R G+++ A  +  G+ +LG+ PS  TYT+++     
Sbjct: 239 YKEMFKANSKPNVNTYTTLIHSLARTGKVNAANTMFMGLPSLGINPSAVTYTIMIQAFLR 298

Query: 653 ARSPYDMGFCHELMAVSG 670
           A++       HE M   G
Sbjct: 299 AKAAGRALALHEAMRSDG 316



 Score =  113 bits (282), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 70/243 (28%), Positives = 119/243 (48%), Gaps = 3/243 (1%)

Query: 359 DEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVF 418
           +E+ YTT +  L +         +  +M     +PN+ TYN LIHS   A  L+ A ++F
Sbjct: 78  NEYIYTTFIDALDKDTCHEEALAVFKEMRDSNWEPNIFTYNVLIHSLATAGKLDGAREMF 137

Query: 419 KQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKA 478
            ++      P+ VTY  L+  H KAG L+ A+   K M  AG  P     S++   L   
Sbjct: 138 GRLPEPHHRPNFVTYTILVTAHVKAGELEKAVHFLKTMMEAGFMPSHGLRSILFTALMAK 197

Query: 479 GHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTY 538
           G    A ++   M  +G  PN+ TY+++I L ++ RN+  ALK+Y++M  A  +P+  TY
Sbjct: 198 GR---ADEVLDNMKERGHRPNVYTYSMLIDLLSRTRNHAHALKMYKEMFKANSKPNVNTY 254

Query: 539 SIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQ 598
           + ++  L   G ++ A  +F  +      P    Y +++  + +A    +A   +EAM  
Sbjct: 255 TTLIHSLARTGKVNAANTMFMGLPSLGINPSAVTYTIMIQAFLRAKAAGRALALHEAMRS 314

Query: 599 AGL 601
            G+
Sbjct: 315 DGI 317


>gi|297832604|ref|XP_002884184.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297330024|gb|EFH60443.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 829

 Score =  175 bits (443), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 105/359 (29%), Positives = 175/359 (48%), Gaps = 8/359 (2%)

Query: 291 FASTGNVVESVSRILRQWKWGPLAEEALGNTNYSMDAYQANQVLKQLQDHTVALGFFNWL 350
           ++ TG   ++++   R  + GP     L   N  +D +      K  +     LG    +
Sbjct: 227 YSRTGKYEKAINLFERMKEMGP--SPTLVTYNVILDVFG-----KMGRSWRKILGVLEEM 279

Query: 351 RRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANY 410
           R + G K DE T +T++    R            ++   G +P  VTYN L+  +G+A  
Sbjct: 280 RSK-GLKFDEFTCSTVLSACAREGLLREAKDFFAELKSCGYEPGTVTYNALLQVFGKAGV 338

Query: 411 LNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSV 470
             EAL V K+M+   C  D VTY  L+  +A+AGF   A  + + M   G+ P+  TY+ 
Sbjct: 339 YTEALSVLKEMEENNCPADSVTYNELVAAYARAGFSKEAAVVIEMMTQKGVMPNAITYTT 398

Query: 471 IINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAG 530
           +I+  GKAG    A +LF  M   GC+PN  TYN ++++  K       +K+  DM++ G
Sbjct: 399 VIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSMLGKKSRSNEMIKMLCDMKSNG 458

Query: 531 FEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAW 590
             P++ T++ ++ + G+ G       VF EM+   + PD   +  L+  +G+ G+   A 
Sbjct: 459 CFPNRATWNTILALCGNKGMDKFVNRVFREMKSCGFEPDRDTFNTLISAYGRCGSEVDAS 518

Query: 591 EWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSC 649
           + Y  M +AG    V T N+LL+A  R G      +++  M + G KP+  +Y+L+L C
Sbjct: 519 KMYGEMTRAGFNACVTTYNALLNALARKGDWRSGENVISDMKSKGFKPTETSYSLMLQC 577



 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 109/457 (23%), Positives = 203/457 (44%), Gaps = 5/457 (1%)

Query: 294 TGNVVESV-SRILRQWKWGPLAEEALGNTNYSMDAYQANQVLKQLQDHTV---ALGFFNW 349
           T NV+  V  ++ R W+      E + +     D +  + VL       +   A  FF  
Sbjct: 254 TYNVILDVFGKMGRSWRKILGVLEEMRSKGLKFDEFTCSTVLSACAREGLLREAKDFFAE 313

Query: 350 LRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRAN 409
           L+   G++    TY  ++ + G+A  +     +L +M  + C  + VTYN L+ +Y RA 
Sbjct: 314 LK-SCGYEPGTVTYNALLQVFGKAGVYTEALSVLKEMEENNCPADSVTYNELVAAYARAG 372

Query: 410 YLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYS 469
           +  EA  V + M   G  P+ +TY T+ID + KAG  D A+ ++  M+ AG  P+T TY+
Sbjct: 373 FSKEAAVVIEMMTQKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYN 432

Query: 470 VIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNA 529
            +++ LGK        ++ C+M + GC PN  T+N ++AL       +   +++R+M++ 
Sbjct: 433 AVLSMLGKKSRSNEMIKMLCDMKSNGCFPNRATWNTILALCGNKGMDKFVNRVFREMKSC 492

Query: 530 GFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKA 589
           GFEPD+ T++ ++   G CG   +A  ++ EM R  +      Y  L++   + G+ R  
Sbjct: 493 GFEPDRDTFNTLISAYGRCGSEVDASKMYGEMTRAGFNACVTTYNALLNALARKGDWRSG 552

Query: 590 WEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSC 649
                 M   G +P   + + +L  + + G       + +G+    + PS      LL  
Sbjct: 553 ENVISDMKSKGFKPTETSYSLMLQCYAKGGNYLGIERIEEGINEGQIFPSWMLLRTLLLA 612

Query: 650 CTEARSPYDMGFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRESK 709
             + R+         L    G+   M + +         N+ D     L+ +H +     
Sbjct: 613 NFKCRALAGSERAFTLFKKHGYKPDMVIFNSMLSIFTRNNMYDQAEGILQSIHEDGLNPD 672

Query: 710 RGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAV 746
               ++++D   + G   +A  + +   +  + PD V
Sbjct: 673 LVTYNSLMDMYVRRGECWKAEEILKTLEKSQLKPDLV 709



 Score =  155 bits (391), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 91/312 (29%), Positives = 158/312 (50%), Gaps = 4/312 (1%)

Query: 343 ALGFFNWL---RRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYN 399
           A+  F WL         K D H    +V ILGR  Q+    KLLD++       +V  Y 
Sbjct: 162 AVFLFEWLVLSSNSGALKLDHHVIEILVRILGRESQYSVAAKLLDKIPLQDYMLDVRAYT 221

Query: 400 RLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAG-FLDVAMDMYKKMQA 458
            ++H+Y R     +A+++F++M+ +G  P  VTY  ++D+  K G      + + ++M++
Sbjct: 222 TILHAYSRTGKYEKAINLFERMKEMGPSPTLVTYNVILDVFGKMGRSWRKILGVLEEMRS 281

Query: 459 AGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQS 518
            GL  D FT S +++   + G L+ A   F E+ + G  P  VTYN ++ +  KA  Y  
Sbjct: 282 KGLKFDEFTCSTVLSACAREGLLREAKDFFAELKSCGYEPGTVTYNALLQVFGKAGVYTE 341

Query: 519 ALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVD 578
           AL + ++M+      D VTY+ ++      G+  EA  V   M +K  +P+   Y  ++D
Sbjct: 342 ALSVLKEMEENNCPADSVTYNELVAAYARAGFSKEAAVVIEMMTQKGVMPNAITYTTVID 401

Query: 579 LWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKP 638
            +GKAG   +A + + +M +AG  PN  T N++LS   +  + ++   +L  M + G  P
Sbjct: 402 AYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSMLGKKSRSNEMIKMLCDMKSNGCFP 461

Query: 639 SLQTYTLLLSCC 650
           +  T+  +L+ C
Sbjct: 462 NRATWNTILALC 473



 Score =  130 bits (326), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 84/344 (24%), Positives = 156/344 (45%), Gaps = 42/344 (12%)

Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLI 402
           AL  F +  ++AG   +  TY  ++ +LG+  +   + K+L  M  +GC PN  T+N ++
Sbjct: 412 ALKLF-YSMKEAGCVPNTCTYNAVLSMLGKKSRSNEMIKMLCDMKSNGCFPNRATWNTIL 470

Query: 403 HSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLS 462
              G          VF++M+  G EPDR T+ TLI  + + G    A  MY +M  AG +
Sbjct: 471 ALCGNKGMDKFVNRVFREMKSCGFEPDRDTFNTLISAYGRCGSEVDASKMYGEMTRAGFN 530

Query: 463 PDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNY------ 516
               TY+ ++N L + G  ++   +  +M ++G  P   +Y++M+   AK  NY      
Sbjct: 531 ACVTTYNALLNALARKGDWRSGENVISDMKSKGFKPTETSYSLMLQCYAKGGNYLGIERI 590

Query: 517 --------------------------------QSALKLYRDMQNAGFEPDKVTYSIVMEV 544
                                           + A  L++     G++PD V ++ ++ +
Sbjct: 591 EEGINEGQIFPSWMLLRTLLLANFKCRALAGSERAFTLFK---KHGYKPDMVIFNSMLSI 647

Query: 545 LGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPN 604
                  D+AE +   +      PD   Y  L+D++ + G   KA E  + + ++ L+P+
Sbjct: 648 FTRNNMYDQAEGILQSIHEDGLNPDLVTYNSLMDMYVRRGECWKAEEILKTLEKSQLKPD 707

Query: 605 VPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
           + + N+++  F R G + +A  +L  M   G++P + TY   +S
Sbjct: 708 LVSYNTVIKGFCRKGLMQEAVRMLSEMTERGIRPCIFTYNTFVS 751



 Score = 81.6 bits (200), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 46/184 (25%), Positives = 85/184 (46%), Gaps = 2/184 (1%)

Query: 350 LRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRAN 409
           L ++ G+K D   + +M+ I  R   +     +L  +  DG  P++VTYN L+  Y R  
Sbjct: 628 LFKKHGYKPDMVIFNSMLSIFTRNNMYDQAEGILQSIHEDGLNPDLVTYNSLMDMYVRRG 687

Query: 410 YLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYS 469
              +A ++ K ++    +PD V+Y T+I    + G +  A+ M  +M   G+ P  FTY+
Sbjct: 688 ECWKAEEILKTLEKSQLKPDLVSYNTVIKGFCRKGLMQEAVRMLSEMTERGIRPCIFTYN 747

Query: 470 VIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNA 529
             ++     G       +   M    C PN +T+ +++    +A  Y  A+     ++  
Sbjct: 748 TFVSGYTAMGMYGEIEDVIECMAKNDCRPNELTFKMVVDGYCRAGKYSEAMDFVSKIKT- 806

Query: 530 GFEP 533
            F+P
Sbjct: 807 -FDP 809



 Score = 78.2 bits (191), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 51/241 (21%), Positives = 107/241 (44%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           +  GFK  E +Y+ M+    +   +  I ++ + +      P+ +    L+ +  +   L
Sbjct: 560 KSKGFKPTETSYSLMLQCYAKGGNYLGIERIEEGINEGQIFPSWMLLRTLLLANFKCRAL 619

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
             +   F   +  G +PD V + +++ I  +    D A  + + +   GL+PD  TY+ +
Sbjct: 620 AGSERAFTLFKKHGYKPDMVIFNSMLSIFTRNNMYDQAEGILQSIHEDGLNPDLVTYNSL 679

Query: 472 INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF 531
           ++   + G    A ++   +      P+LV+YN +I    +    Q A+++  +M   G 
Sbjct: 680 MDMYVRRGECWKAEEILKTLEKSQLKPDLVSYNTVIKGFCRKGLMQEAVRMLSEMTERGI 739

Query: 532 EPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWE 591
            P   TY+  +      G   E E V   M + +  P+E  + ++VD + +AG   +A +
Sbjct: 740 RPCIFTYNTFVSGYTAMGMYGEIEDVIECMAKNDCRPNELTFKMVVDGYCRAGKYSEAMD 799

Query: 592 W 592
           +
Sbjct: 800 F 800



 Score = 52.8 bits (125), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 31/132 (23%), Positives = 58/132 (43%), Gaps = 14/132 (10%)

Query: 326 DAYQANQVLKQLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQ 385
           + ++A ++LK L+              ++  K D  +Y T++    R        ++L +
Sbjct: 688 ECWKAEEILKTLE--------------KSQLKPDLVSYNTVIKGFCRKGLMQEAVRMLSE 733

Query: 386 MVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGF 445
           M   G +P + TYN  +  Y       E  DV + M    C P+ +T+  ++D + +AG 
Sbjct: 734 MTERGIRPCIFTYNTFVSGYTAMGMYGEIEDVIECMAKNDCRPNELTFKMVVDGYCRAGK 793

Query: 446 LDVAMDMYKKMQ 457
              AMD   K++
Sbjct: 794 YSEAMDFVSKIK 805


>gi|414872431|tpg|DAA50988.1| TPA: hypothetical protein ZEAMMB73_390723 [Zea mays]
          Length = 1627

 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 113/384 (29%), Positives = 186/384 (48%), Gaps = 16/384 (4%)

Query: 282  AGLAPFSRHFASTGNVVESVSRILRQWKWGPLAEEALGNTNYSMDAYQANQVLKQLQDHT 341
            A +AP  R+  S   + E   RIL+ +KWGP AE+AL      +D +   +V+K      
Sbjct: 1037 ATIAP--RYTHSVRVLDERFIRILKIFKWGPDAEKALEVLMLRVDHWLVREVMKTDVGVN 1094

Query: 342  VALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDG-CQPNVVTYNR 400
            V + FF W  ++  ++HD  TY  ++  L    Q+G + K++ +MVR+  C       + 
Sbjct: 1095 VKMQFFRWAAKRRNYEHDTSTYMALIHCLEVVEQYGEMWKMIQEMVRNPICVVTPTELSD 1154

Query: 401  LIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAG 460
            ++   G A  + +A+ +F Q++   C+P    Y ++I +    G  +    +Y +M   G
Sbjct: 1155 VVRMLGNAKMVRQAITIFYQIKTRKCQPIAQAYNSMIIMLMHEGQYEKVHQLYNEMSTEG 1214

Query: 461  -LSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSA 519
               PDT TYS +I+   K G   +A QL  EM   G  P    Y ++IAL  K  +   A
Sbjct: 1215 HCFPDTVTYSALISAFCKLGRRDSAIQLLNEMKEIGMQPTTKIYTMLIALFFKFNDAHGA 1274

Query: 520  LKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDL 579
            L L+ +M++    PD  TY+ ++  LG  G +DEA   F EM+R+   PD      +++ 
Sbjct: 1275 LSLFEEMRHQYCRPDVFTYTELIRGLGKAGRIDEAYHFFCEMQREGCRPDTVFMNNMINF 1334

Query: 580  WGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSA-FLRVGQLSDAYHLLQGMLNLGLKP 638
             GKAG +  A + ++ M      P+V T N+++ A F    + S+     + M   G+ P
Sbjct: 1335 LGKAGRLDDAMKLFQEMETLRCIPSVVTYNTIIKALFESKSRASEVPSWFERMKESGISP 1394

Query: 639  SLQTYTLLLSCCTEARSPYDMGFC 662
            S  TY++L+            GFC
Sbjct: 1395 SSFTYSILID-----------GFC 1407



 Score =  148 bits (374), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 97/349 (27%), Positives = 163/349 (46%), Gaps = 39/349 (11%)

Query: 336  QLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNV 395
            +  D   AL  F  +R Q   + D  TYT ++  LG+A +         +M R+GC+P+ 
Sbjct: 1267 KFNDAHGALSLFEEMRHQY-CRPDVFTYTELIRGLGKAGRIDEAYHFFCEMQREGCRPDT 1325

Query: 396  VTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLID--IHAKAGFLDVAMDMY 453
            V  N +I+  G+A  L++A+ +F++M+ + C P  VTY T+I     +K+   +V    +
Sbjct: 1326 VFMNNMINFLGKAGRLDDAMKLFQEMETLRCIPSVVTYNTIIKALFESKSRASEVP-SWF 1384

Query: 454  KKMQAAGLSPDTFTYSVIIN-----------------------------------CLGKA 478
            ++M+ +G+SP +FTYS++I+                                    LGKA
Sbjct: 1385 ERMKESGISPSSFTYSILIDGFCKTNRMEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKA 1444

Query: 479  GHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTY 538
                 A +LF E+       +   Y +MI    KA     A+ ++ +M   G  PD   Y
Sbjct: 1445 KRYDLACELFQELKENCGSSSARVYAVMIKHLGKAGRLDDAINMFDEMNKLGCAPDVYAY 1504

Query: 539  SIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQ 598
            + +M  L   G LDEA +    M+    +PD   Y ++++   K G   +A E    M Q
Sbjct: 1505 NALMSGLARTGMLDEALSTMRRMQEHGCIPDINSYNIILNGLAKTGGPHRAMEMLSNMKQ 1564

Query: 599  AGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
            + +RP+V + N++L A    G   +A  L++ M  LG +  L TY+ +L
Sbjct: 1565 STVRPDVVSYNTVLGALSHAGMFEEASKLMKEMNTLGFEYDLITYSSIL 1613



 Score =  147 bits (370), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 87/316 (27%), Positives = 146/316 (46%), Gaps = 2/316 (0%)

Query: 343  ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLI 402
            A+   N ++ + G +     YT ++ +  +         L ++M    C+P+V TY  LI
Sbjct: 1239 AIQLLNEMK-EIGMQPTTKIYTMLIALFFKFNDAHGALSLFEEMRHQYCRPDVFTYTELI 1297

Query: 403  HSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLS 462
               G+A  ++EA   F +MQ  GC PD V    +I+   KAG LD AM ++++M+     
Sbjct: 1298 RGLGKAGRIDEAYHFFCEMQREGCRPDTVFMNNMINFLGKAGRLDDAMKLFQEMETLRCI 1357

Query: 463  PDTFTYSVIINCLGKA-GHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALK 521
            P   TY+ II  L ++          F  M   G  P+  TY+I+I    K    + A+ 
Sbjct: 1358 PSVVTYNTIIKALFESKSRASEVPSWFERMKESGISPSSFTYSILIDGFCKTNRMEKAMM 1417

Query: 522  LYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWG 581
            L  +M   GF P    Y  +++ LG     D A  +F E++         VY +++   G
Sbjct: 1418 LLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLACELFQELKENCGSSSARVYAVMIKHLG 1477

Query: 582  KAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQ 641
            KAG +  A   ++ M + G  P+V   N+L+S   R G L +A   ++ M   G  P + 
Sbjct: 1478 KAGRLDDAINMFDEMNKLGCAPDVYAYNALMSGLARTGMLDEALSTMRRMQEHGCIPDIN 1537

Query: 642  TYTLLLSCCTEARSPY 657
            +Y ++L+   +   P+
Sbjct: 1538 SYNIILNGLAKTGGPH 1553


>gi|302791141|ref|XP_002977337.1| hypothetical protein SELMODRAFT_107186 [Selaginella moellendorffii]
 gi|300154707|gb|EFJ21341.1| hypothetical protein SELMODRAFT_107186 [Selaginella moellendorffii]
          Length = 636

 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 103/315 (32%), Positives = 161/315 (51%), Gaps = 2/315 (0%)

Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLI 402
           A  +F  ++++ G   +E TY  ++    +  +      LL +M   G  PNVVTY+ +I
Sbjct: 26  ATTYFAKMKKK-GTVPNEWTYNVLINGFCKVHKVHRAYLLLKEMKESGLAPNVVTYSTVI 84

Query: 403 HSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLS 462
           H + R   ++ A  +F+QM   GC P+ VTY TL+    + G +D A ++  +M+  GL 
Sbjct: 85  HGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCRNGLMDEAYELLDEMRERGLQ 144

Query: 463 PDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKL 522
           PD F+Y  ++  L K G +  A ++F +  N  C P++V Y+ +IA   K      A KL
Sbjct: 145 PDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYSTLIAGLCKTGRLDEACKL 204

Query: 523 YRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGK 582
           +  M+    EPD VT++ +M+ L     L EA+ V   M  +N  P+   Y  L+D   K
Sbjct: 205 FEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRNCTPNVITYSSLIDGLCK 264

Query: 583 AGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQT 642
            G VR A E ++ M+  G+ PNV T NSL+  F     +  A  L++ M   G  P + T
Sbjct: 265 TGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSALLLMEEMTATGCLPDIIT 324

Query: 643 Y-TLLLSCCTEARSP 656
           Y TL+   C   R+P
Sbjct: 325 YNTLIDGLCKTGRAP 339



 Score =  166 bits (419), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 98/296 (33%), Positives = 160/296 (54%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           R+   + D  T+T ++  L +  +     ++L+ M    C PNV+TY+ LI    +   +
Sbjct: 209 RENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRNCTPNVITYSSLIDGLCKTGQV 268

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
            +A +VFK+M V G EP+ VTY +LI        +D A+ + ++M A G  PD  TY+ +
Sbjct: 269 RDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSALLLMEEMTATGCLPDIITYNTL 328

Query: 472 INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF 531
           I+ L K G    A++LF +M  + C P+++TY+ +I    K      A  L+ DM     
Sbjct: 329 IDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCLIGGFCKLERIDMARTLFDDMLKQAV 388

Query: 532 EPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWE 591
            PD VT+S ++E   + G +D+AE +  EM   +  PD   Y  LVD + K G + +A  
Sbjct: 389 LPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDCSPDVYTYTSLVDGFCKVGRMVEARR 448

Query: 592 WYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
             + M + G +PNV T  +L+ AF R G+ + AY LL+ M+  G++P++ TY  L+
Sbjct: 449 VLKRMAKRGCQPNVVTYTALIDAFCRAGKPTVAYKLLEEMVGNGVQPNVITYRSLI 504



 Score =  155 bits (393), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 89/298 (29%), Positives = 154/298 (51%)

Query: 359 DEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVF 418
           D   Y+T++  L +  +     KL ++M  + C+P+VVT+  L+    + + L EA  V 
Sbjct: 181 DVVAYSTLIAGLCKTGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVL 240

Query: 419 KQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKA 478
           + M+   C P+ +TY +LID   K G +  A +++K+M   G+ P+  TY+ +I+     
Sbjct: 241 ETMEDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMT 300

Query: 479 GHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTY 538
             + +A  L  EM   GC+P+++TYN +I    K      A +L+ DM+     PD +TY
Sbjct: 301 NGVDSALLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITY 360

Query: 539 SIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQ 598
           S ++        +D A  +F +M ++  +PD   +  LV+ +  AG V  A    E M+ 
Sbjct: 361 SCLIGGFCKLERIDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVA 420

Query: 599 AGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSP 656
           +   P+V T  SL+  F +VG++ +A  +L+ M   G +P++ TYT L+     A  P
Sbjct: 421 SDCSPDVYTYTSLVDGFCKVGRMVEARRVLKRMAKRGCQPNVVTYTALIDAFCRAGKP 478



 Score =  152 bits (385), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 106/408 (25%), Positives = 185/408 (45%), Gaps = 16/408 (3%)

Query: 329 QANQVLKQLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVR 388
           +A QVL+ ++D                      TY++++  L +  Q     ++  +M+ 
Sbjct: 235 EAQQVLETMEDRNCTPNVI--------------TYSSLIDGLCKTGQVRDAQEVFKRMIV 280

Query: 389 DGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDV 448
            G +PNVVTYN LIH +   N ++ AL + ++M   GC PD +TY TLID   K G    
Sbjct: 281 RGIEPNVVTYNSLIHGFCMTNGVDSALLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPE 340

Query: 449 AMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIA 508
           A  ++  M+A   +PD  TYS +I    K   +  A  LF +M+ Q  +P++VT++ ++ 
Sbjct: 341 ANRLFGDMKAKFCNPDVITYSCLIGGFCKLERIDMARTLFDDMLKQAVLPDVVTFSTLVE 400

Query: 509 LQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVP 568
               A     A +L  +M  +   PD  TY+ +++     G + EA  V   M ++   P
Sbjct: 401 GYCNAGLVDDAERLLEEMVASDCSPDVYTYTSLVDGFCKVGRMVEARRVLKRMAKRGCQP 460

Query: 569 DEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLL 628
           +   Y  L+D + +AG    A++  E M+  G++PNV T  SL+  F   G L +A  +L
Sbjct: 461 NVVTYTALIDAFCRAGKPTVAYKLLEEMVGNGVQPNVITYRSLIGGFCGTGDLEEARKML 520

Query: 629 QGM-LNLGLKPSLQTYTLLLS-CCTEARSPYDMGFCHELMAVSGHPAHMFLLSMPSPGPD 686
           + +  +   K  +  Y +++   C   R    +     +      P H   +++      
Sbjct: 521 ERLERDENCKADMFAYRVMMDGLCRTGRMSAALELLEAIKQSGTPPRHDIYVALIRGLCQ 580

Query: 687 GQNVRDHVGSFLEMMHSEDRESKRGLVDAVVDFLHKSGLKEEAGSVWE 734
           G+ +   +    EM  S          +AV+  L + G  EEA ++ +
Sbjct: 581 GKELGKAMEVLEEMTLSRKSRPNAEAYEAVIQELAREGRHEEANALAD 628



 Score =  152 bits (384), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 90/297 (30%), Positives = 151/297 (50%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           R+ G + D+ +Y T++  L +  +     K+ +      C P+VV Y+ LI    +   L
Sbjct: 139 RERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYSTLIAGLCKTGRL 198

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
           +EA  +F++M+   CEPD VT+  L+D   K   L  A  + + M+    +P+  TYS +
Sbjct: 199 DEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRNCTPNVITYSSL 258

Query: 472 INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF 531
           I+ L K G ++ A ++F  M+ +G  PN+VTYN +I          SAL L  +M   G 
Sbjct: 259 IDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSALLLMEEMTATGC 318

Query: 532 EPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWE 591
            PD +TY+ +++ L   G   EA  +F +M+ K   PD   Y  L+  + K   +  A  
Sbjct: 319 LPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCLIGGFCKLERIDMART 378

Query: 592 WYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
            ++ ML+  + P+V T ++L+  +   G + DA  LL+ M+     P + TYT L+ 
Sbjct: 379 LFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDCSPDVYTYTSLVD 435



 Score =  146 bits (369), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 107/401 (26%), Positives = 183/401 (45%), Gaps = 12/401 (2%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           +++G   +  TY+T++    R  +     KL  QMV +GC PN+VTYN L+    R   +
Sbjct: 69  KESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCRNGLM 128

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
           +EA ++  +M+  G +PD+ +Y TL+    K G +D+A+ +++        PD   YS +
Sbjct: 129 DEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYSTL 188

Query: 472 INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF 531
           I  L K G L  A +LF +M    C P++VT+  ++    K    Q A ++   M++   
Sbjct: 189 IAGLCKTGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRNC 248

Query: 532 EPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWE 591
            P+ +TYS +++ L   G + +A+ VF  M  +   P+   Y  L+  +     V  A  
Sbjct: 249 TPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSALL 308

Query: 592 WYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS--C 649
             E M   G  P++ T N+L+    + G+  +A  L   M      P + TY+ L+   C
Sbjct: 309 LMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCLIGGFC 368

Query: 650 CTE----ARSPYDMGFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSED 705
             E    AR+ +D     +++  +  P  +   S    G     + D     LE M + D
Sbjct: 369 KLERIDMARTLFD-----DMLKQAVLP-DVVTFSTLVEGYCNAGLVDDAERLLEEMVASD 422

Query: 706 RESKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAV 746
                    ++VD   K G   EA  V +  A++   P+ V
Sbjct: 423 CSPDVYTYTSLVDGFCKVGRMVEARRVLKRMAKRGCQPNVV 463



 Score =  140 bits (352), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 89/292 (30%), Positives = 143/292 (48%), Gaps = 35/292 (11%)

Query: 391 CQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAM 450
           C+ NV+T+  +I    +AN L EA   F +M+  G  P+  TY  LI+   K   +  A 
Sbjct: 3   CEKNVITWTIMIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAY 62

Query: 451 DMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIA-- 508
            + K+M+ +GL+P+  TYS +I+   +   +  A++LF +MV  GC+PNLVTYN +++  
Sbjct: 63  LLLKEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGL 122

Query: 509 --------------------LQAKARNYQS-------------ALKLYRDMQNAGFEPDK 535
                               LQ    +Y +             ALK++ D  N    PD 
Sbjct: 123 CRNGLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDV 182

Query: 536 VTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEA 595
           V YS ++  L   G LDEA  +F +MR  +  PD   +  L+D   K   +++A +  E 
Sbjct: 183 VAYSTLIAGLCKTGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLET 242

Query: 596 MLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
           M      PNV T +SL+    + GQ+ DA  + + M+  G++P++ TY  L+
Sbjct: 243 MEDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLI 294



 Score =  111 bits (277), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 71/276 (25%), Positives = 128/276 (46%), Gaps = 2/276 (0%)

Query: 359 DEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVF 418
           D  TY+ ++G   +  +      L D M++    P+VVT++ L+  Y  A  +++A  + 
Sbjct: 356 DVITYSCLIGGFCKLERIDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLL 415

Query: 419 KQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKA 478
           ++M    C PD  TY +L+D   K G +  A  + K+M   G  P+  TY+ +I+   +A
Sbjct: 416 EEMVASDCSPDVYTYTSLVDGFCKVGRMVEARRVLKRMAKRGCQPNVVTYTALIDAFCRA 475

Query: 479 GHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQ-NAGFEPDKVT 537
           G    A++L  EMV  G  PN++TY  +I       + + A K+   ++ +   + D   
Sbjct: 476 GKPTVAYKLLEEMVGNGVQPNVITYRSLIGGFCGTGDLEEARKMLERLERDENCKADMFA 535

Query: 538 YSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAM- 596
           Y ++M+ L   G +  A  +   +++    P   +Y  L+    +   + KA E  E M 
Sbjct: 536 YRVMMDGLCRTGRMSAALELLEAIKQSGTPPRHDIYVALIRGLCQGKELGKAMEVLEEMT 595

Query: 597 LQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGML 632
           L    RPN     +++    R G+  +A  L   +L
Sbjct: 596 LSRKSRPNAEAYEAVIQELAREGRHEEANALADELL 631


>gi|297802850|ref|XP_002869309.1| hypothetical protein ARALYDRAFT_491552 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297315145|gb|EFH45568.1| hypothetical protein ARALYDRAFT_491552 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 1114

 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 123/452 (27%), Positives = 214/452 (47%), Gaps = 11/452 (2%)

Query: 300 SVSRILRQWKWGPLAEEALGNTNYSMDAYQANQVLKQLQDHTVALGFFNWLRRQA--GFK 357
           SV   LRQ    P A   +    + ++AY  N ++  L             RR    GF+
Sbjct: 166 SVKGGLRQ---APFALRKMREFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILDGFR 222

Query: 358 HDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDV 417
               TY++++  LG+ R   ++  LL +M   G +PNV T+   I   GRA  +NEA ++
Sbjct: 223 PSLQTYSSLMVGLGKRRDIESVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEI 282

Query: 418 FKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGK 477
            K+M   GC PD VTY  LID    A  LD A +++ KM+     PD  TY  +++    
Sbjct: 283 LKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFAKMKTGRHKPDRVTYITLLDRFSD 342

Query: 478 AGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVT 537
              L + +Q + EM   G +P++VT+ I++    KA N+  A      M++ G  P+  T
Sbjct: 343 NRDLDSVNQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFAKLDVMRDQGILPNLHT 402

Query: 538 YSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAML 597
           Y+ ++  L     LD+A  +F  M      P    Y + +D +GK+G+   A E +E M 
Sbjct: 403 YNTLICGLLRVHRLDDALEIFDNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMK 462

Query: 598 QAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPY 657
             G+ PN+  CN+ L +  + G+  +A  +  G+ ++GL P   TY +++ C ++     
Sbjct: 463 TKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEID 522

Query: 658 D-MGFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRESKRGLV--D 714
           + +    E++     P  + + S+ +       V +    F+ M   ++ + K  +V  +
Sbjct: 523 EAIKLLSEMVENCCEPDVIVVNSLINTLYKADRVDEAWKMFMRM---KEMKLKPTVVTYN 579

Query: 715 AVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAV 746
            ++  L K+G  +EA  ++E   QK   P+ +
Sbjct: 580 TLLAGLGKNGKIQEAIELFEGMVQKGCPPNTI 611



 Score =  160 bits (404), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 94/308 (30%), Positives = 157/308 (50%), Gaps = 1/308 (0%)

Query: 359 DEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVF 418
           D  T+T +V  L +A  FG     LD M   G  PN+ TYN LI    R + L++AL++F
Sbjct: 364 DVVTFTILVDALCKAGNFGEAFAKLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALEIF 423

Query: 419 KQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKA 478
             M+ +G +P   TY   ID + K+G    A++ ++KM+  G++P+    +  +  L KA
Sbjct: 424 DNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKA 483

Query: 479 GHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTY 538
           G  + A Q+F  + + G +P+ VTYN+M+   +K      A+KL  +M     EPD +  
Sbjct: 484 GRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMVENCCEPDVIVV 543

Query: 539 SIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQ 598
           + ++  L     +DEA  +F  M+     P    Y  L+   GK G +++A E +E M+Q
Sbjct: 544 NSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQ 603

Query: 599 AGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTY-TLLLSCCTEARSPY 657
            G  PN  T N+L     +  +++ A  +L  M+++G  P + TY T++       +   
Sbjct: 604 KGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKE 663

Query: 658 DMGFCHEL 665
            M F H++
Sbjct: 664 AMCFFHQM 671



 Score =  159 bits (403), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 103/338 (30%), Positives = 156/338 (46%), Gaps = 37/338 (10%)

Query: 346  FFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSY 405
             F    +  G +    TY  ++G L  A        +  Q+   GC P+V TYN L+ +Y
Sbjct: 773  LFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKNTGCIPDVATYNFLLDAY 832

Query: 406  GRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKK-MQAAGLSPD 464
            G++  ++E  +++K+M    CEP+ +T+  +I    KAG +D A+D+Y   M     SP 
Sbjct: 833  GKSGKIDELFEIYKEMSAHECEPNTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPT 892

Query: 465  TFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYR 524
              TY  +I+ L K+G L  A QLF  M + GC PN   YNI+I    KA    +A  L++
Sbjct: 893  ACTYGPLIDGLSKSGRLYEAKQLFEGMSDYGCRPNCAIYNILINGFGKAGEADAACALFK 952

Query: 525  DMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGK-- 582
             M   G  PD  TYS++++ L   G +DE    F E++     PD   Y L+++  GK  
Sbjct: 953  RMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFRELKESGLNPDVVCYNLIINGLGKFH 1012

Query: 583  ----------------------------------AGNVRKAWEWYEAMLQAGLRPNVPTC 608
                                              AG V +A + Y  + +AGL PNV T 
Sbjct: 1013 RLEEALVLFNEMKKSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTF 1072

Query: 609  NSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLL 646
            N+L+  +   G+   AY + Q M+  G  P+  TY  L
Sbjct: 1073 NALIRGYSLSGKPEHAYAVYQTMVTGGFSPNTGTYEQL 1110



 Score =  156 bits (394), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 91/293 (31%), Positives = 153/293 (52%)

Query: 357 KHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALD 416
           K D  TY T++      R   ++N+   +M +DG  P+VVT+  L+ +  +A    EA  
Sbjct: 327 KPDRVTYITLLDRFSDNRDLDSVNQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFA 386

Query: 417 VFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLG 476
               M+  G  P+  TY TLI    +   LD A++++  M++ G+ P  +TY V I+  G
Sbjct: 387 KLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALEIFDNMESLGVKPTAYTYIVFIDYYG 446

Query: 477 KAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKV 536
           K+G   +A + F +M  +G  PN+V  N  +   AKA   + A +++  +++ G  PD V
Sbjct: 447 KSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSV 506

Query: 537 TYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAM 596
           TY+++M+     G +DEA  + +EM      PD  V   L++   KA  V +AW+ +  M
Sbjct: 507 TYNMMMKCYSKVGEIDEAIKLLSEMVENCCEPDVIVVNSLINTLYKADRVDEAWKMFMRM 566

Query: 597 LQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSC 649
            +  L+P V T N+LL+   + G++ +A  L +GM+  G  P+  T+  L  C
Sbjct: 567 KEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDC 619



 Score =  125 bits (315), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 93/339 (27%), Positives = 152/339 (44%), Gaps = 38/339 (11%)

Query: 347 FNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKL---LDQMVRDGCQPNVVTYNRLIH 403
           F++ +  AG  +  HT  T   +L   R  G I ++    D M +   + +  TY  +  
Sbjct: 104 FSYFKSVAGNSNLVHTTETCNYMLEALRVDGKIEEMAYVFDLMQKRIIKRDTNTYLTIFK 163

Query: 404 SYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSP 463
                  L +A    ++M+  G   +  +Y  LI +  K+ F   AM++Y++M   G  P
Sbjct: 164 CLSVKGGLRQAPFALRKMREFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILDGFRP 223

Query: 464 DTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLY 523
              TYS ++  LGK   +++   L  EM   G  PN+ T+ I I +  +A     A ++ 
Sbjct: 224 SLQTYSSLMVGLGKRRDIESVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEIL 283

Query: 524 RDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFA------------------------ 559
           + M + G  PD VTY+++++ L     LD A+ VFA                        
Sbjct: 284 KRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFAKMKTGRHKPDRVTYITLLDRFSDN 343

Query: 560 -----------EMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTC 608
                      EM +   VPD   + +LVD   KAGN  +A+   + M   G+ PN+ T 
Sbjct: 344 RDLDSVNQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFAKLDVMRDQGILPNLHTY 403

Query: 609 NSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
           N+L+   LRV +L DA  +   M +LG+KP+  TY + +
Sbjct: 404 NTLICGLLRVHRLDDALEIFDNMESLGVKPTAYTYIVFI 442



 Score =  119 bits (299), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 73/232 (31%), Positives = 118/232 (50%), Gaps = 1/232 (0%)

Query: 343  ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLI 402
            AL  +  L     F     TY  ++  L ++ +     +L + M   GC+PN   YN LI
Sbjct: 876  ALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMSDYGCRPNCAIYNILI 935

Query: 403  HSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLS 462
            + +G+A   + A  +FK+M   G  PD  TY  L+D     G +D  +  +++++ +GL+
Sbjct: 936  NGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFRELKESGLN 995

Query: 463  PDTFTYSVIINCLGKAGHLQAAHQLFCEM-VNQGCIPNLVTYNIMIALQAKARNYQSALK 521
            PD   Y++IIN LGK   L+ A  LF EM  ++G  P+L TYN +I     A   + A K
Sbjct: 996  PDVVCYNLIINGLGKFHRLEEALVLFNEMKKSRGITPDLYTYNSLILNLGIAGMVEEAGK 1055

Query: 522  LYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVY 573
            +Y ++Q AG EP+  T++ ++      G  + A AV+  M    + P+   Y
Sbjct: 1056 IYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPNTGTY 1107



 Score = 80.5 bits (197), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 81/318 (25%), Positives = 130/318 (40%), Gaps = 37/318 (11%)

Query: 452 MYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQA 511
           ++  MQ   +  DT TY  I  CL   G L+ A     +M   G + N  +YN +I L  
Sbjct: 142 VFDLMQKRIIKRDTNTYLTIFKCLSVKGGLRQAPFALRKMREFGFVLNAYSYNGLIHLLL 201

Query: 512 KARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEP 571
           K+R    A+++YR M   GF P   TYS +M  LG               +R++    E 
Sbjct: 202 KSRFCTEAMEVYRRMILDGFRPSLQTYSSLMVGLG---------------KRRDI---ES 243

Query: 572 VYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGM 631
           V GLL                 + M   GL+PNV T    +    R G++++AY +L+ M
Sbjct: 244 VMGLL-----------------KEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRM 286

Query: 632 LNLGLKPSLQTYTLLLSCCTEARSPYDMGFCHELMAVSGH-PAHMFLLSMPSPGPDGQNV 690
            + G  P + TYT+L+     AR           M    H P  +  +++     D +++
Sbjct: 287 DDEGCGPDVVTYTVLIDALCTARKLDCAKEVFAKMKTGRHKPDRVTYITLLDRFSDNRDL 346

Query: 691 RDHVGSFLEMMHSEDRESKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAVKEKG 750
            D V  F   M  +           +VD L K+G   EA +  +V   + + P+      
Sbjct: 347 -DSVNQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFAKLDVMRDQGILPNLHTYNT 405

Query: 751 MSYWLINLHVMSDGTAVI 768
           +   L+ +H + D   + 
Sbjct: 406 LICGLLRVHRLDDALEIF 423



 Score = 59.7 bits (143), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 39/132 (29%), Positives = 68/132 (51%), Gaps = 2/132 (1%)

Query: 343  ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRD-GCQPNVVTYNRL 401
             L +F  L+ ++G   D   Y  ++  LG+  +      L ++M +  G  P++ TYN L
Sbjct: 982  GLHYFRELK-ESGLNPDVVCYNLIINGLGKFHRLEEALVLFNEMKKSRGITPDLYTYNSL 1040

Query: 402  IHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGL 461
            I + G A  + EA  ++ ++Q  G EP+  T+  LI  ++ +G  + A  +Y+ M   G 
Sbjct: 1041 ILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGF 1100

Query: 462  SPDTFTYSVIIN 473
            SP+T TY  + N
Sbjct: 1101 SPNTGTYEQLPN 1112


>gi|224092696|ref|XP_002309701.1| predicted protein [Populus trichocarpa]
 gi|222855677|gb|EEE93224.1| predicted protein [Populus trichocarpa]
          Length = 597

 Score =  174 bits (442), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 101/305 (33%), Positives = 163/305 (53%), Gaps = 15/305 (4%)

Query: 362 TYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQM 421
           T+TT++  L +  +F    +L D MV  GCQP+V TYN +I+   +      A  + K+M
Sbjct: 165 TFTTLINGLCKVGEFAQAVELFDDMVAKGCQPDVYTYNTIINGLCKIGETAAAAGLLKKM 224

Query: 422 QVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHL 481
           +  GC+P+ VTY TLID   +   ++ A+D++  M+A G+SPD FTY+ +I  L K    
Sbjct: 225 EEAGCQPNMVTYSTLIDSLCRDRLVNEALDIFSYMKAKGISPDIFTYTSLIQGLCKFSRW 284

Query: 482 QAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIV 541
           + A  L  EM +   +P++VT+N+++    K      AL + + M   G EP+ VTYS +
Sbjct: 285 KEASALLNEMTSLNIMPDIVTFNVLVDTFCKEGKVSEALGVLKTMTEMGVEPNVVTYSSL 344

Query: 542 MEVLGHCGYLD--EAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQA 599
           M   G+  + D  EA  +F  M  K   P+   Y +L++ + KA  + +A + +  M+  
Sbjct: 345 M--YGYSLWTDVVEARKLFHVMITKGCKPNIFSYNILINGYCKAKRIDEAMQLFNEMIHQ 402

Query: 600 GLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDM 659
           GL PN  + N+L+  F ++G+L +A  L + M   G  P L TY++LL            
Sbjct: 403 GLTPNNVSYNTLIHGFCQLGKLREAQDLFRNMCTNGNLPDLFTYSILLD----------- 451

Query: 660 GFCHE 664
           GFC +
Sbjct: 452 GFCKQ 456



 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 100/329 (30%), Positives = 157/329 (47%), Gaps = 35/329 (10%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           G + D +TY T++  L +  +  A   LL +M   GCQPN+VTY+ LI S  R   +NEA
Sbjct: 193 GCQPDVYTYNTIINGLCKIGETAAAAGLLKKMEEAGCQPNMVTYSTLIDSLCRDRLVNEA 252

Query: 415 LDVFKQMQVVGCEPDRVTYCTLI-----------------------------------DI 439
           LD+F  M+  G  PD  TY +LI                                   D 
Sbjct: 253 LDIFSYMKAKGISPDIFTYTSLIQGLCKFSRWKEASALLNEMTSLNIMPDIVTFNVLVDT 312

Query: 440 HAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPN 499
             K G +  A+ + K M   G+ P+  TYS ++        +  A +LF  M+ +GC PN
Sbjct: 313 FCKEGKVSEALGVLKTMTEMGVEPNVVTYSSLMYGYSLWTDVVEARKLFHVMITKGCKPN 372

Query: 500 LVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFA 559
           + +YNI+I    KA+    A++L+ +M + G  P+ V+Y+ ++      G L EA+ +F 
Sbjct: 373 IFSYNILINGYCKAKRIDEAMQLFNEMIHQGLTPNNVSYNTLIHGFCQLGKLREAQDLFR 432

Query: 560 EMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVG 619
            M     +PD   Y +L+D + K G + KA+  + AM    L+PN+     L+ A  + G
Sbjct: 433 NMCTNGNLPDLFTYSILLDGFCKQGYLGKAFRLFRAMQSTYLKPNLVMYTILVHAMCKSG 492

Query: 620 QLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
              DA  L   +   GL+P +Q YT +++
Sbjct: 493 NHKDARKLFSELFVQGLQPHVQLYTTIIN 521



 Score =  150 bits (378), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 92/307 (29%), Positives = 165/307 (53%), Gaps = 5/307 (1%)

Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLI 402
           AL  F++++ + G   D  TYT+++  L +  ++   + LL++M      P++VT+N L+
Sbjct: 252 ALDIFSYMKAK-GISPDIFTYTSLIQGLCKFSRWKEASALLNEMTSLNIMPDIVTFNVLV 310

Query: 403 HSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDV--AMDMYKKMQAAG 460
            ++ +   ++EAL V K M  +G EP+ VTY +L+  +  + + DV  A  ++  M   G
Sbjct: 311 DTFCKEGKVSEALGVLKTMTEMGVEPNVVTYSSLM--YGYSLWTDVVEARKLFHVMITKG 368

Query: 461 LSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSAL 520
             P+ F+Y+++IN   KA  +  A QLF EM++QG  PN V+YN +I    +    + A 
Sbjct: 369 CKPNIFSYNILINGYCKAKRIDEAMQLFNEMIHQGLTPNNVSYNTLIHGFCQLGKLREAQ 428

Query: 521 KLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLW 580
            L+R+M   G  PD  TYSI+++     GYL +A  +F  M+     P+  +Y +LV   
Sbjct: 429 DLFRNMCTNGNLPDLFTYSILLDGFCKQGYLGKAFRLFRAMQSTYLKPNLVMYTILVHAM 488

Query: 581 GKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSL 640
            K+GN + A + +  +   GL+P+V    ++++   + G L +A    + M   G  P  
Sbjct: 489 CKSGNHKDARKLFSELFVQGLQPHVQLYTTIINGLCKEGLLDEALEAFRNMEADGCPPDE 548

Query: 641 QTYTLLL 647
            +Y +++
Sbjct: 549 ISYNVII 555



 Score =  142 bits (358), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 85/281 (30%), Positives = 142/281 (50%)

Query: 368 GILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCE 427
            I+   + +  +  L  QM   G  PN+ T +  ++ + +   ++    V  ++  +G +
Sbjct: 101 AIVKMGQYYDVVISLSKQMELVGLSPNIYTLSIFMNCFCQLQRVDLGFSVLAKVIKLGLQ 160

Query: 428 PDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQL 487
           P  VT+ TLI+   K G    A++++  M A G  PD +TY+ IIN L K G   AA  L
Sbjct: 161 PTIVTFTTLINGLCKVGEFAQAVELFDDMVAKGCQPDVYTYNTIINGLCKIGETAAAAGL 220

Query: 488 FCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGH 547
             +M   GC PN+VTY+ +I    + R    AL ++  M+  G  PD  TY+ +++ L  
Sbjct: 221 LKKMEEAGCQPNMVTYSTLIDSLCRDRLVNEALDIFSYMKAKGISPDIFTYTSLIQGLCK 280

Query: 548 CGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPT 607
                EA A+  EM   N +PD   + +LVD + K G V +A    + M + G+ PNV T
Sbjct: 281 FSRWKEASALLNEMTSLNIMPDIVTFNVLVDTFCKEGKVSEALGVLKTMTEMGVEPNVVT 340

Query: 608 CNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
            +SL+  +     + +A  L   M+  G KP++ +Y +L++
Sbjct: 341 YSSLMYGYSLWTDVVEARKLFHVMITKGCKPNIFSYNILIN 381



 Score =  122 bits (305), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 77/278 (27%), Positives = 138/278 (49%)

Query: 359 DEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVF 418
           D  T+  +V    +  +      +L  M   G +PNVVTY+ L++ Y     + EA  +F
Sbjct: 302 DIVTFNVLVDTFCKEGKVSEALGVLKTMTEMGVEPNVVTYSSLMYGYSLWTDVVEARKLF 361

Query: 419 KQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKA 478
             M   GC+P+  +Y  LI+ + KA  +D AM ++ +M   GL+P+  +Y+ +I+   + 
Sbjct: 362 HVMITKGCKPNIFSYNILINGYCKAKRIDEAMQLFNEMIHQGLTPNNVSYNTLIHGFCQL 421

Query: 479 GHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTY 538
           G L+ A  LF  M   G +P+L TY+I++    K      A +L+R MQ+   +P+ V Y
Sbjct: 422 GKLREAQDLFRNMCTNGNLPDLFTYSILLDGFCKQGYLGKAFRLFRAMQSTYLKPNLVMY 481

Query: 539 SIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQ 598
           +I++  +   G   +A  +F+E+  +   P   +Y  +++   K G + +A E +  M  
Sbjct: 482 TILVHAMCKSGNHKDARKLFSELFVQGLQPHVQLYTTIINGLCKEGLLDEALEAFRNMEA 541

Query: 599 AGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGL 636
            G  P+  + N ++   L+    S A  L+  M + G 
Sbjct: 542 DGCPPDEISYNVIIRGLLQHKDESRALLLVGEMRDRGF 579



 Score =  120 bits (301), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 65/217 (29%), Positives = 119/217 (54%), Gaps = 4/217 (1%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           G K +  +Y  ++    +A++     +L ++M+  G  PN V+YN LIH + +   L EA
Sbjct: 368 GCKPNIFSYNILINGYCKAKRIDEAMQLFNEMIHQGLTPNNVSYNTLIHGFCQLGKLREA 427

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
            D+F+ M   G  PD  TY  L+D   K G+L  A  +++ MQ+  L P+   Y+++++ 
Sbjct: 428 QDLFRNMCTNGNLPDLFTYSILLDGFCKQGYLGKAFRLFRAMQSTYLKPNLVMYTILVHA 487

Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPD 534
           + K+G+ + A +LF E+  QG  P++  Y  +I    K      AL+ +R+M+  G  PD
Sbjct: 488 MCKSGNHKDARKLFSELFVQGLQPHVQLYTTIINGLCKEGLLDEALEAFRNMEADGCPPD 547

Query: 535 KVTYSIVMEVLGHCGYLDEAEAVF--AEMRRKNWVPD 569
           +++Y++++   G   + DE+ A+    EMR + ++ D
Sbjct: 548 EISYNVIIR--GLLQHKDESRALLLVGEMRDRGFIAD 582



 Score = 70.9 bits (172), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 57/267 (21%), Positives = 112/267 (41%), Gaps = 1/267 (0%)

Query: 488 FCEMVNQGCIPNLVTY-NIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLG 546
           F  M+++  +P ++ +  ++ A+    + Y   + L + M+  G  P+  T SI M    
Sbjct: 80  FNHMLHRKPLPCIIQFAKLLSAIVKMGQYYDVVISLSKQMELVGLSPNIYTLSIFMNCFC 139

Query: 547 HCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVP 606
               +D   +V A++ +    P    +  L++   K G   +A E ++ M+  G +P+V 
Sbjct: 140 QLQRVDLGFSVLAKVIKLGLQPTIVTFTTLINGLCKVGEFAQAVELFDDMVAKGCQPDVY 199

Query: 607 TCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGFCHELM 666
           T N++++   ++G+ + A  LL+ M   G +P++ TY+ L+      R   +       M
Sbjct: 200 TYNTIINGLCKIGETAAAAGLLKKMEEAGCQPNMVTYSTLIDSLCRDRLVNEALDIFSYM 259

Query: 667 AVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRESKRGLVDAVVDFLHKSGLK 726
              G    +F  +    G    +      + L  M S +        + +VD   K G  
Sbjct: 260 KAKGISPDIFTYTSLIQGLCKFSRWKEASALLNEMTSLNIMPDIVTFNVLVDTFCKEGKV 319

Query: 727 EEAGSVWEVAAQKNVYPDAVKEKGMSY 753
            EA  V +   +  V P+ V    + Y
Sbjct: 320 SEALGVLKTMTEMGVEPNVVTYSSLMY 346



 Score = 65.9 bits (159), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 41/142 (28%), Positives = 71/142 (50%)

Query: 359 DEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVF 418
           D  TY+ ++    +    G   +L   M     +PN+V Y  L+H+  ++    +A  +F
Sbjct: 442 DLFTYSILLDGFCKQGYLGKAFRLFRAMQSTYLKPNLVMYTILVHAMCKSGNHKDARKLF 501

Query: 419 KQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKA 478
            ++ V G +P    Y T+I+   K G LD A++ ++ M+A G  PD  +Y+VII  L + 
Sbjct: 502 SELFVQGLQPHVQLYTTIINGLCKEGLLDEALEAFRNMEADGCPPDEISYNVIIRGLLQH 561

Query: 479 GHLQAAHQLFCEMVNQGCIPNL 500
                A  L  EM ++G I ++
Sbjct: 562 KDESRALLLVGEMRDRGFIADV 583


>gi|356574297|ref|XP_003555285.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g02860-like [Glycine max]
          Length = 794

 Score =  173 bits (439), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 94/324 (29%), Positives = 165/324 (50%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           G   D  TY T++        +     L +++   G +P+ VTYN L+  YG++    EA
Sbjct: 245 GLAPDLCTYNTLISCCRAGSLYEEALDLFEEIKVAGFRPDAVTYNALLDVYGKSRRPKEA 304

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
           ++V KQM+     P  VTY +L+  + + G L+ A+ + +KM   G+ PD +TY+ +++ 
Sbjct: 305 MEVLKQMESNSFRPSVVTYNSLVSAYVRGGLLEDALVLKRKMVDKGIKPDVYTYTTLLSG 364

Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPD 534
              AG  + A ++F EM   GC PN+ T+N +I +      ++  +K++++++     PD
Sbjct: 365 FVNAGKEELAMEVFEEMRKVGCKPNICTFNALIKMYGDRGKFEEMVKVFKEIKVCKCSPD 424

Query: 535 KVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYE 594
            VT++ ++ V G  G   E   VF EM+R  + P+   +  L+  +G+ G+  +A   Y+
Sbjct: 425 IVTWNTLLAVFGQNGMDSEVSGVFEEMKRSRFAPERDTFNTLISAYGRCGSFDQAMAAYK 484

Query: 595 AMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEAR 654
            ML+AG+ P++ T N++L+   R G    +  +L  M + G KP+  TY+ LL      R
Sbjct: 485 RMLEAGVSPDLSTYNAVLATLARGGLWEQSEKVLAEMKDGGCKPNEVTYSSLLHAYANGR 544

Query: 655 SPYDMGFCHELMAVSGHPAHMFLL 678
               M    E +       H  LL
Sbjct: 545 EVERMNALAEEIYSGTIKTHAVLL 568



 Score =  139 bits (349), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 80/277 (28%), Positives = 145/277 (52%), Gaps = 9/277 (3%)

Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLI 402
           AL  F  ++  AGF+ D  TY  ++ + G++R+     ++L QM  +  +P+VVTYN L+
Sbjct: 269 ALDLFEEIK-VAGFRPDAVTYNALLDVYGKSRRPKEAMEVLKQMESNSFRPSVVTYNSLV 327

Query: 403 HSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLS 462
            +Y R   L +AL + ++M   G +PD  TY TL+     AG  ++AM+++++M+  G  
Sbjct: 328 SAYVRGGLLEDALVLKRKMVDKGIKPDVYTYTTLLSGFVNAGKEELAMEVFEEMRKVGCK 387

Query: 463 PDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKL 522
           P+  T++ +I   G  G  +   ++F E+    C P++VT+N ++A+  +         +
Sbjct: 388 PNICTFNALIKMYGDRGKFEEMVKVFKEIKVCKCSPDIVTWNTLLAVFGQNGMDSEVSGV 447

Query: 523 YRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGK 582
           + +M+ + F P++ T++ ++   G CG  D+A A +  M      PD   Y  ++    +
Sbjct: 448 FEEMKRSRFAPERDTFNTLISAYGRCGSFDQAMAAYKRMLEAGVSPDLSTYNAVLATLAR 507

Query: 583 AGNVRKAWEWYEAML----QAGLRPNVPTCNSLLSAF 615
            G     WE  E +L      G +PN  T +SLL A+
Sbjct: 508 GG----LWEQSEKVLAEMKDGGCKPNEVTYSSLLHAY 540



 Score =  138 bits (348), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 94/392 (23%), Positives = 184/392 (46%), Gaps = 24/392 (6%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           R+ G K +  T+  ++ + G   +F  + K+  ++    C P++VT+N L+  +G+    
Sbjct: 382 RKVGCKPNICTFNALIKMYGDRGKFEEMVKVFKEIKVCKCSPDIVTWNTLLAVFGQNGMD 441

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
           +E   VF++M+     P+R T+ TLI  + + G  D AM  YK+M  AG+SPD  TY+ +
Sbjct: 442 SEVSGVFEEMKRSRFAPERDTFNTLISAYGRCGSFDQAMAAYKRMLEAGVSPDLSTYNAV 501

Query: 472 INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF 531
           +  L + G  + + ++  EM + GC PN VTY+ ++   A  R  +    L  ++ +   
Sbjct: 502 LATLARGGLWEQSEKVLAEMKDGGCKPNEVTYSSLLHAYANGREVERMNALAEEIYSGTI 561

Query: 532 EPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWE 591
           +   V    ++ V      L E E  F E R++   PD      ++ ++G+   V KA E
Sbjct: 562 KTHAVLLKTLVLVNSKVDLLVETERAFLEFRKRGISPDVTTSNAMLSIYGRKKMVPKANE 621

Query: 592 WYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCT 651
               M ++GL  ++ + NSL+  + R      +  + + +L+ G++P + +Y +++    
Sbjct: 622 ILNFMYESGLTLSLTSYNSLMYMYSRTENFHKSEQIFREILDKGIEPDVISYNIVI---- 677

Query: 652 EARSPYDMGFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSF-LEMMHSEDRESKR 710
                    +C   M        +  + +P+P PD       + ++  + M  E  +  R
Sbjct: 678 -------YAYCRNDMMDEAKRI-IEEMKVPAPVPDVVTYNTFIAAYAADSMFVEAIDVIR 729

Query: 711 GLV-----------DAVVDFLHKSGLKEEAGS 731
            ++           +++VD+  K  L++EA S
Sbjct: 730 YMIKQGCKPNHNTYNSIVDWYCKLKLRDEACS 761



 Score =  136 bits (343), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 85/310 (27%), Positives = 153/310 (49%), Gaps = 3/310 (0%)

Query: 342 VALGFFNWLRRQAGFKH--DEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYN 399
           +AL  F+++R +       +      +V ILG+  +      LL  +  DG + +V  Y 
Sbjct: 124 LALSLFDFIRTRNDRVSLLNGSVIAVIVSILGKTGRVSRAASLLHNLEADGFEVDVYGYT 183

Query: 400 RLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGF-LDVAMDMYKKMQA 458
            LI +Y       +AL VF +M+ VGCEP  +TY  +++++ K G      + + + M+ 
Sbjct: 184 SLITAYANNKKYRDALKVFGKMKEVGCEPTLITYNAILNVYGKMGMPWAKIIALVQDMKC 243

Query: 459 AGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQS 518
            GL+PD  TY+ +I+C       + A  LF E+   G  P+ VTYN ++ +  K+R  + 
Sbjct: 244 HGLAPDLCTYNTLISCCRAGSLYEEALDLFEEIKVAGFRPDAVTYNALLDVYGKSRRPKE 303

Query: 519 ALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVD 578
           A+++ + M++  F P  VTY+ ++      G L++A  +  +M  K   PD   Y  L+ 
Sbjct: 304 AMEVLKQMESNSFRPSVVTYNSLVSAYVRGGLLEDALVLKRKMVDKGIKPDVYTYTTLLS 363

Query: 579 LWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKP 638
            +  AG    A E +E M + G +PN+ T N+L+  +   G+  +   + + +      P
Sbjct: 364 GFVNAGKEELAMEVFEEMRKVGCKPNICTFNALIKMYGDRGKFEEMVKVFKEIKVCKCSP 423

Query: 639 SLQTYTLLLS 648
            + T+  LL+
Sbjct: 424 DIVTWNTLLA 433



 Score =  115 bits (288), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 66/282 (23%), Positives = 138/282 (48%)

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
           +AG   D  TY  ++  L R   +    K+L +M   GC+PN VTY+ L+H+Y     + 
Sbjct: 488 EAGVSPDLSTYNAVLATLARGGLWEQSEKVLAEMKDGGCKPNEVTYSSLLHAYANGREVE 547

Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
               + +++     +   V   TL+ +++K   L      + + +  G+SPD  T + ++
Sbjct: 548 RMNALAEEIYSGTIKTHAVLLKTLVLVNSKVDLLVETERAFLEFRKRGISPDVTTSNAML 607

Query: 473 NCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFE 532
           +  G+   +  A+++   M   G   +L +YN ++ + ++  N+  + +++R++ + G E
Sbjct: 608 SIYGRKKMVPKANEILNFMYESGLTLSLTSYNSLMYMYSRTENFHKSEQIFREILDKGIE 667

Query: 533 PDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEW 592
           PD ++Y+IV+        +DEA+ +  EM+    VPD   Y   +  +       +A + 
Sbjct: 668 PDVISYNIVIYAYCRNDMMDEAKRIIEEMKVPAPVPDVVTYNTFIAAYAADSMFVEAIDV 727

Query: 593 YEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNL 634
              M++ G +PN  T NS++  + ++    +A   +Q + +L
Sbjct: 728 IRYMIKQGCKPNHNTYNSIVDWYCKLKLRDEACSFVQNLGDL 769



 Score = 50.1 bits (118), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 29/113 (25%), Positives = 54/113 (47%), Gaps = 1/113 (0%)

Query: 539 SIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQ 598
           ++++ +LG  G +  A ++   +    +  D   Y  L+  +      R A + +  M +
Sbjct: 148 AVIVSILGKTGRVSRAASLLHNLEADGFEVDVYGYTSLITAYANNKKYRDALKVFGKMKE 207

Query: 599 AGLRPNVPTCNSLLSAFLRVGQ-LSDAYHLLQGMLNLGLKPSLQTYTLLLSCC 650
            G  P + T N++L+ + ++G   +    L+Q M   GL P L TY  L+SCC
Sbjct: 208 VGCEPTLITYNAILNVYGKMGMPWAKIIALVQDMKCHGLAPDLCTYNTLISCC 260


>gi|242067341|ref|XP_002448947.1| hypothetical protein SORBIDRAFT_05g002250 [Sorghum bicolor]
 gi|241934790|gb|EES07935.1| hypothetical protein SORBIDRAFT_05g002250 [Sorghum bicolor]
          Length = 797

 Score =  173 bits (439), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 113/413 (27%), Positives = 195/413 (47%), Gaps = 11/413 (2%)

Query: 355 GFKHDEHTYTTMVGIL---GRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           G K D +TY +++  L   GR R+        D M+R G +PNV  Y  LIH Y     L
Sbjct: 303 GLKPDCYTYGSLLNYLCNNGRCRE---ARFFFDSMIRKGIKPNVAIYGILIHGYATKGAL 359

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
           +E  D+   M   G  PD   +  +   +AK   +D AM ++ KM+  GLSPD   +  +
Sbjct: 360 SEMHDLLNLMVENGLSPDHHIFNIIFTAYAKKAMIDEAMHIFNKMKQQGLSPDVVNFGAL 419

Query: 472 INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF 531
           I+ L K G +  A   F +M+N+G  PN+  +N ++        ++ A + Y +M N G 
Sbjct: 420 IDALCKLGRVDDAVLKFNQMMNEGVAPNIFVFNSLVYGLCTVDKWEKAKEFYFEMLNQGI 479

Query: 532 EPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWE 591
            PD V ++ ++  L   G + +A+ +   M R    PD   Y  L+      G + +A +
Sbjct: 480 RPDVVFFNTILCNLCTKGQVMKAQRLIDLMERVGTRPDVISYTTLIGGHCLVGRIDEAAK 539

Query: 592 WYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCT 651
             + ML  GL+P+  T N+LL  + R G++ DAY + + ML  G+ P + TY+ +L    
Sbjct: 540 SLDVMLSVGLKPDEWTYNTLLHGYCRAGRIDDAYGVFREMLRNGITPGVVTYSTILHGLF 599

Query: 652 EARSPYDMGFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRESKRG 711
             R   +    +  M  SG   ++++ ++   G    N  D      + + S+D + +  
Sbjct: 600 TTRRFSEAKELYLNMITSGKQWNIWIYNIILNGLSKNNCVDEAFKLFQSLCSKDFQLEIT 659

Query: 712 LVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAVKEKGMSYWLINLHVMSDG 764
             + ++  L KSG  E+A  ++   +   + PD       +Y LI  +++ +G
Sbjct: 660 TFNIMIGALFKSGRNEDAMHLFATISSYGLVPDV-----FTYCLIAENLIEEG 707



 Score =  132 bits (332), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 77/283 (27%), Positives = 141/283 (49%), Gaps = 3/283 (1%)

Query: 368 GILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQM---QVV 424
           G+    R   A++ L+ +M   GC P+VV+YN L+  +       EAL++   M   Q  
Sbjct: 138 GLCDAKRLREAMDILIKRMPELGCTPDVVSYNTLLKGFCNEKRAEEALELLHMMADSQGR 197

Query: 425 GCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAA 484
            C P+ V+Y T+I+     G +D A +++ +M   G+ P+  TY+ +I+ L KA  +  A
Sbjct: 198 SCPPNVVSYATVINGFFTEGQVDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQVVDRA 257

Query: 485 HQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEV 544
             +F +M+++G  P+  TYN +I        ++  +++  +M   G +PD  TY  ++  
Sbjct: 258 EGVFQQMIDKGVKPDNDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLNY 317

Query: 545 LGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPN 604
           L + G   EA   F  M RK   P+  +YG+L+  +   G + +  +    M++ GL P+
Sbjct: 318 LCNNGRCREARFFFDSMIRKGIKPNVAIYGILIHGYATKGALSEMHDLLNLMVENGLSPD 377

Query: 605 VPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
               N + +A+ +   + +A H+   M   GL P +  +  L+
Sbjct: 378 HHIFNIIFTAYAKKAMIDEAMHIFNKMKQQGLSPDVVNFGALI 420



 Score =  130 bits (326), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 84/313 (26%), Positives = 150/313 (47%), Gaps = 6/313 (1%)

Query: 342 VALGFFNWLRRQAGFK--HDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYN 399
           + +  FN + R+   K   D  TY+ ++G   R  +          +++ G + N +  N
Sbjct: 74  LVVSLFNRMIRECTIKVTPDLCTYSILIGCFCRMGRLEHGFATFGLILKSGWRVNNIVIN 133

Query: 400 RLIHSYGRANYLNEALDVF-KQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKM-- 456
           +L+     A  L EA+D+  K+M  +GC PD V+Y TL+         + A+++   M  
Sbjct: 134 QLLKGLCDAKRLREAMDILIKRMPELGCTPDVVSYNTLLKGFCNEKRAEEALELLHMMAD 193

Query: 457 -QAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARN 515
            Q     P+  +Y+ +IN     G +  A+ LF EM+++G  PN+VTY  +I    KA+ 
Sbjct: 194 SQGRSCPPNVVSYATVINGFFTEGQVDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQV 253

Query: 516 YQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGL 575
              A  +++ M + G +PD  TY+ ++      G   E   +  EM      PD   YG 
Sbjct: 254 VDRAEGVFQQMIDKGVKPDNDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGS 313

Query: 576 LVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLG 635
           L++     G  R+A  ++++M++ G++PNV     L+  +   G LS+ + LL  M+  G
Sbjct: 314 LLNYLCNNGRCREARFFFDSMIRKGIKPNVAIYGILIHGYATKGALSEMHDLLNLMVENG 373

Query: 636 LKPSLQTYTLLLS 648
           L P    + ++ +
Sbjct: 374 LSPDHHIFNIIFT 386



 Score =  122 bits (306), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 99/368 (26%), Positives = 158/368 (42%), Gaps = 46/368 (12%)

Query: 331 NQVLKQLQDHTVALGFFNWLRR---QAGFKHDEHTYTTMV-GILGRARQFGAINKLLDQM 386
           NQ+LK L D        + L +   + G   D  +Y T++ G     R   A+  L   M
Sbjct: 133 NQLLKGLCDAKRLREAMDILIKRMPELGCTPDVVSYNTLLKGFCNEKRAEEALELL--HM 190

Query: 387 VRDG----CQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAK 442
           + D     C PNVV+Y  +I+ +     +++A ++F +M   G +P+ VTY T+ID   K
Sbjct: 191 MADSQGRSCPPNVVSYATVINGFFTEGQVDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCK 250

Query: 443 AGFLDVA-----------------------------------MDMYKKMQAAGLSPDTFT 467
           A  +D A                                   + M ++M A GL PD +T
Sbjct: 251 AQVVDRAEGVFQQMIDKGVKPDNDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYT 310

Query: 468 YSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQ 527
           Y  ++N L   G  + A   F  M+ +G  PN+  Y I+I   A          L   M 
Sbjct: 311 YGSLLNYLCNNGRCREARFFFDSMIRKGIKPNVAIYGILIHGYATKGALSEMHDLLNLMV 370

Query: 528 NAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVR 587
             G  PD   ++I+         +DEA  +F +M+++   PD   +G L+D   K G V 
Sbjct: 371 ENGLSPDHHIFNIIFTAYAKKAMIDEAMHIFNKMKQQGLSPDVVNFGALIDALCKLGRVD 430

Query: 588 KAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTY-TLL 646
            A   +  M+  G+ PN+   NSL+     V +   A      MLN G++P +  + T+L
Sbjct: 431 DAVLKFNQMMNEGVAPNIFVFNSLVYGLCTVDKWEKAKEFYFEMLNQGIRPDVVFFNTIL 490

Query: 647 LSCCTEAR 654
            + CT+ +
Sbjct: 491 CNLCTKGQ 498



 Score =  115 bits (289), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 74/270 (27%), Positives = 134/270 (49%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           G + D   + T++  L    Q     +L+D M R G +P+V++Y  LI  +     ++EA
Sbjct: 478 GIRPDVVFFNTILCNLCTKGQVMKAQRLIDLMERVGTRPDVISYTTLIGGHCLVGRIDEA 537

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
                 M  VG +PD  TY TL+  + +AG +D A  ++++M   G++P   TYS I++ 
Sbjct: 538 AKSLDVMLSVGLKPDEWTYNTLLHGYCRAGRIDDAYGVFREMLRNGITPGVVTYSTILHG 597

Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPD 534
           L        A +L+  M+  G   N+  YNI++   +K      A KL++ + +  F+ +
Sbjct: 598 LFTTRRFSEAKELYLNMITSGKQWNIWIYNIILNGLSKNNCVDEAFKLFQSLCSKDFQLE 657

Query: 535 KVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYE 594
             T++I++  L   G  ++A  +FA +     VPD   Y L+ +   + G + +  + + 
Sbjct: 658 ITTFNIMIGALFKSGRNEDAMHLFATISSYGLVPDVFTYCLIAENLIEEGYLEEFDDLFS 717

Query: 595 AMLQAGLRPNVPTCNSLLSAFLRVGQLSDA 624
           AM ++G  PN    N+L+   L  G ++ A
Sbjct: 718 AMEKSGTTPNSRMLNALVRRLLHRGDITRA 747



 Score =  114 bits (284), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 78/280 (27%), Positives = 134/280 (47%), Gaps = 11/280 (3%)

Query: 350 LRRQAGFKHDEHTYTTMVG---ILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYG 406
           L  + G + D  +YTT++G   ++GR  +     K LD M+  G +P+  TYN L+H Y 
Sbjct: 508 LMERVGTRPDVISYTTLIGGHCLVGRIDEAA---KSLDVMLSVGLKPDEWTYNTLLHGYC 564

Query: 407 RANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTF 466
           RA  +++A  VF++M   G  P  VTY T++           A ++Y  M  +G   + +
Sbjct: 565 RAGRIDDAYGVFREMLRNGITPGVVTYSTILHGLFTTRRFSEAKELYLNMITSGKQWNIW 624

Query: 467 TYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDM 526
            Y++I+N L K   +  A +LF  + ++     + T+NIMI    K+   + A+ L+  +
Sbjct: 625 IYNIILNGLSKNNCVDEAFKLFQSLCSKDFQLEITTFNIMIGALFKSGRNEDAMHLFATI 684

Query: 527 QNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNV 586
            + G  PD  TY ++ E L   GYL+E + +F+ M +    P+  +   LV      G++
Sbjct: 685 SSYGLVPDVFTYCLIAENLIEEGYLEEFDDLFSAMEKSGTTPNSRMLNALVRRLLHRGDI 744

Query: 587 RKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYH 626
            +A  +   + +        T   L+S   R     D YH
Sbjct: 745 TRAGAYLSKLDEKNFSLEASTTAMLISLLSR-----DEYH 779



 Score =  106 bits (264), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 66/255 (25%), Positives = 123/255 (48%)

Query: 385 QMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAG 444
           +M+  G +P+VV +N ++ +      + +A  +   M+ VG  PD ++Y TLI  H   G
Sbjct: 473 EMLNQGIRPDVVFFNTILCNLCTKGQVMKAQRLIDLMERVGTRPDVISYTTLIGGHCLVG 532

Query: 445 FLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYN 504
            +D A      M + GL PD +TY+ +++   +AG +  A+ +F EM+  G  P +VTY+
Sbjct: 533 RIDEAAKSLDVMLSVGLKPDEWTYNTLLHGYCRAGRIDDAYGVFREMLRNGITPGVVTYS 592

Query: 505 IMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRK 564
            ++      R +  A +LY +M  +G + +   Y+I++  L     +DEA  +F  +  K
Sbjct: 593 TILHGLFTTRRFSEAKELYLNMITSGKQWNIWIYNIILNGLSKNNCVDEAFKLFQSLCSK 652

Query: 565 NWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDA 624
           ++  +   + +++    K+G    A   +  +   GL P+V T   +    +  G L + 
Sbjct: 653 DFQLEITTFNIMIGALFKSGRNEDAMHLFATISSYGLVPDVFTYCLIAENLIEEGYLEEF 712

Query: 625 YHLLQGMLNLGLKPS 639
             L   M   G  P+
Sbjct: 713 DDLFSAMEKSGTTPN 727



 Score =  100 bits (250), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 71/306 (23%), Positives = 140/306 (45%), Gaps = 5/306 (1%)

Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLI 402
           A+  FN +++Q G   D   +  ++  L +  +        +QM+ +G  PN+  +N L+
Sbjct: 397 AMHIFNKMKQQ-GLSPDVVNFGALIDALCKLGRVDDAVLKFNQMMNEGVAPNIFVFNSLV 455

Query: 403 HSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLS 462
           +     +   +A + + +M   G  PD V + T++      G +  A  +   M+  G  
Sbjct: 456 YGLCTVDKWEKAKEFYFEMLNQGIRPDVVFFNTILCNLCTKGQVMKAQRLIDLMERVGTR 515

Query: 463 PDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKL 522
           PD  +Y+ +I      G +  A +    M++ G  P+  TYN ++    +A     A  +
Sbjct: 516 PDVISYTTLIGGHCLVGRIDEAAKSLDVMLSVGLKPDEWTYNTLLHGYCRAGRIDDAYGV 575

Query: 523 YRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEM--RRKNWVPDEPVYGLLVDLW 580
           +R+M   G  P  VTYS ++  L       EA+ ++  M    K W  +  +Y ++++  
Sbjct: 576 FREMLRNGITPGVVTYSTILHGLFTTRRFSEAKELYLNMITSGKQW--NIWIYNIILNGL 633

Query: 581 GKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSL 640
            K   V +A++ ++++     +  + T N ++ A  + G+  DA HL   + + GL P +
Sbjct: 634 SKNNCVDEAFKLFQSLCSKDFQLEITTFNIMIGALFKSGRNEDAMHLFATISSYGLVPDV 693

Query: 641 QTYTLL 646
            TY L+
Sbjct: 694 FTYCLI 699



 Score = 57.0 bits (136), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 45/198 (22%), Positives = 86/198 (43%), Gaps = 39/198 (19%)

Query: 461 LSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSAL 520
           ++PD  TYS++I C  + G L+     F  ++  G   N +  N ++     A+  + A+
Sbjct: 90  VTPDLCTYSILIGCFCRMGRLEHGFATFGLILKSGWRVNNIVINQLLKGLCDAKRLREAM 149

Query: 521 K-LYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDL 579
             L + M   G  PD V+Y+ +++     G+ +E  A                       
Sbjct: 150 DILIKRMPELGCTPDVVSYNTLLK-----GFCNEKRA----------------------- 181

Query: 580 WGKAGNVRKAWEWYEAMLQAGLR---PNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGL 636
                   +A E    M  +  R   PNV +  ++++ F   GQ+  AY+L   M++ G+
Sbjct: 182 -------EEALELLHMMADSQGRSCPPNVVSYATVINGFFTEGQVDKAYNLFLEMMDRGI 234

Query: 637 KPSLQTYTLLLSCCTEAR 654
           +P++ TYT ++    +A+
Sbjct: 235 QPNVVTYTTVIDGLCKAQ 252



 Score = 46.2 bits (108), Expect = 0.077,   Method: Compositional matrix adjust.
 Identities = 46/225 (20%), Positives = 91/225 (40%), Gaps = 39/225 (17%)

Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLI 402
           A G F  + R  G      TY+T++  L   R+F    +L   M+  G Q N+  YN ++
Sbjct: 572 AYGVFREMLRN-GITPGVVTYSTILHGLFTTRRFSEAKELYLNMITSGKQWNIWIYNIIL 630

Query: 403 HSYGRANYLNEALDVFK-------QMQVV----------------------------GCE 427
           +   + N ++EA  +F+       Q+++                             G  
Sbjct: 631 NGLSKNNCVDEAFKLFQSLCSKDFQLEITTFNIMIGALFKSGRNEDAMHLFATISSYGLV 690

Query: 428 PDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQL 487
           PD  TYC + +   + G+L+   D++  M+ +G +P++   + ++  L   G +  A   
Sbjct: 691 PDVFTYCLIAENLIEEGYLEEFDDLFSAMEKSGTTPNSRMLNALVRRLLHRGDITRAGAY 750

Query: 488 FCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKL---YRDMQNA 529
             ++  +       T  ++I+L ++   +  A  L   YR +  A
Sbjct: 751 LSKLDEKNFSLEASTTAMLISLLSRDEYHHHATSLPEKYRVLNEA 795


>gi|225427240|ref|XP_002278451.1| PREDICTED: pentatricopeptide repeat-containing protein At5g46580,
           chloroplastic [Vitis vinifera]
          Length = 723

 Score =  173 bits (439), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 127/539 (23%), Positives = 236/539 (43%), Gaps = 50/539 (9%)

Query: 346 FFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSY 405
           FFNW++ Q  F  +   Y   +  L   RQF  I +L ++M+  G + + +TY+ +I   
Sbjct: 185 FFNWIKTQNLFPMETIFYNVTMKSLRFGRQFQLIEELANEMISTGVELDNITYSTIITCA 244

Query: 406 GRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDT 465
            R N  ++A+  F++M   G  PD VTY  ++D++AK G ++  + +Y++ +A+G  PD 
Sbjct: 245 KRCNLFDKAVKWFERMYKTGLMPDEVTYSAILDVYAKLGKVEEVLSLYERGRASGWKPDP 304

Query: 466 FTYSVI-----------------------------------INCLGKAGHLQAAHQLFCE 490
             ++V+                                   +  +GKAG    A  LF E
Sbjct: 305 IAFAVLGKMFGEAGDYDGIRYVLQEMKSLGVQPNLVVYNTLLEAMGKAGKPGLARSLFEE 364

Query: 491 MVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGY 550
           MV  G IP+  T   ++ +  KAR  + AL+L+  M++ G+  D + Y+ ++ +    G 
Sbjct: 365 MVGSGVIPDAKTLTALVKIYGKARWARDALELWERMRSNGWPMDFILYNTLLSMCADLGL 424

Query: 551 LDEAEAVFAEMRR-KNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCN 609
            +EAE +F +M++ ++  PD   Y  +++++G  GNV +A + ++ M + G++ NV  C 
Sbjct: 425 EEEAEKLFEDMKKSEHCRPDSWSYTAMLNIYGSGGNVDRAMQLFDEMSELGVQINVMGCT 484

Query: 610 SLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSC---CTEARSPYDMGFCHELM 666
            L     R  ++ D   + +  L  G+KP  +    LLS    C  A     +  C +  
Sbjct: 485 CLSQCLGRARRIDDLVKVFEVSLERGVKPDDRLCGCLLSVVSFCEGAEDANKVLACLQ-- 542

Query: 667 AVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRESKRGLVDAVVDFLHKSGLK 726
               +P  +  +++       + +++    F  ++     E++R   + ++D      L 
Sbjct: 543 --QANPKLVAFVNLLEEKISFEALKEE---FRGILTDTAVEARRPFCNCLIDICRNRSLH 597

Query: 727 EEAGSVWEVAAQKNVYPDAVKEKGMSYWLINLHVMSDGTAVIALSRTLAWFRKQMLISGV 786
           E A  +  +     +YP  +  +    W +++  +S G A  AL   +    K +     
Sbjct: 598 ERAHELLYLGTLYGLYP-GLHNRTADEWCLDVRSLSVGAAHTALEEWMGTLSKIVQREEA 656

Query: 787 GPSRIDIVTGWGRRSRVTGTSLVRQAVQELLHMFSFPFFTENGNSGCFVGCGEPLNKWL 845
            P      TG G      G +    A    +   + PF      +GCFV   E L  W+
Sbjct: 657 LPEAFSANTGTGTHKFSQGLA---SAFASHVKKLAAPFTQSEEKAGCFVATREDLVSWV 712



 Score = 96.3 bits (238), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 78/329 (23%), Positives = 145/329 (44%), Gaps = 26/329 (7%)

Query: 291 FASTGNVVESVSRILRQ----WKWGPLAEEALGNTNYSMDAYQA-NQVLKQLQDHTVALG 345
           +A  G V E +S   R     WK  P+A   LG        Y     VL+++        
Sbjct: 279 YAKLGKVEEVLSLYERGRASGWKPDPIAFAVLGKMFGEAGDYDGIRYVLQEM-------- 330

Query: 346 FFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSY 405
                 +  G + +   Y T++  +G+A + G    L ++MV  G  P+  T   L+  Y
Sbjct: 331 ------KSLGVQPNLVVYNTLLEAMGKAGKPGLARSLFEEMVGSGVIPDAKTLTALVKIY 384

Query: 406 GRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAG-LSPD 464
           G+A +  +AL+++++M+  G   D + Y TL+ + A  G  + A  +++ M+ +    PD
Sbjct: 385 GKARWARDALELWERMRSNGWPMDFILYNTLLSMCADLGLEEEAEKLFEDMKKSEHCRPD 444

Query: 465 TFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYR 524
           +++Y+ ++N  G  G++  A QLF EM   G   N++    +     +AR     +K++ 
Sbjct: 445 SWSYTAMLNIYGSGGNVDRAMQLFDEMSELGVQINVMGCTCLSQCLGRARRIDDLVKVFE 504

Query: 525 DMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAG 584
                G +PD      ++ V+  C   ++A  V A +++ N     P     V+L  +  
Sbjct: 505 VSLERGVKPDDRLCGCLLSVVSFCEGAEDANKVLACLQQAN-----PKLVAFVNLLEEKI 559

Query: 585 NVRKAWEWYEAML-QAGLRPNVPTCNSLL 612
           +     E +  +L    +    P CN L+
Sbjct: 560 SFEALKEEFRGILTDTAVEARRPFCNCLI 588


>gi|222617300|gb|EEE53432.1| hypothetical protein OsJ_36514 [Oryza sativa Japonica Group]
          Length = 607

 Score =  173 bits (439), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 132/508 (25%), Positives = 231/508 (45%), Gaps = 26/508 (5%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           G   D +TY T +  + +        ++L  M   G +PNVVTY+ LI  Y +     EA
Sbjct: 82  GIGRDIYTYNTFIDAICKCGNMELAMQVLLDMEAKGVKPNVVTYSTLIDGYSKLEKYEEA 141

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
           L + ++M+ +  + DRV Y TL+ I+ KAG      ++  +M+  G+  DT TY+ +IN 
Sbjct: 142 LKLCEKMKSMRIQLDRVCYNTLLAIYVKAGKYAEIANVCDEMEELGIEKDTVTYNSLING 201

Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPD 534
            GK G L     L  +M  +G  P+++TY+ +I + +KA  +  A  +Y D + +G +PD
Sbjct: 202 YGKQGRLDIVSILVQDMRKRGVAPSVLTYSTLIDIYSKAGMHGDAFNVYLDFKESGLKPD 261

Query: 535 KVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYE 594
            V +S  ++ L   G ++ A ++  +M      P+   Y  ++D +GK+  + +      
Sbjct: 262 VVLFSSFIDTLAKNGLIEWALSLLNDMTEMGIKPNVVTYNAIIDAFGKSKVMMEDDSEVG 321

Query: 595 AMLQAG------LRPNVPTCNSLLSA----FLRVGQLSDAYHLLQGMLNLGLKPSLQTYT 644
            M   G      +R   P      SA      R  +L     L Q M+  G++P++ T++
Sbjct: 322 DMGIVGVYGGQIVRVANPVSRGGRSATDVRMRRSQELFFILELFQKMVQQGVRPNVVTFS 381

Query: 645 LLLSCCTEARSPYDMGFCHELMAVSGH----PAHMFLLSMPSPGPDGQNVRDHVGSFLEM 700
            +L+ C+   S  D     E + +  +     A+  L+         Q++ + +G     
Sbjct: 382 AILNACSRCNSFEDAALLLEQLRLFDNFVYGVAYGLLVGSREVWSQAQSLFNQLGRM--- 438

Query: 701 MHSEDRESKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAVKEKGMSYWLINLHV 760
               D  +     +A+ D L   G + +A  V      + V+ +   E     + ++LH+
Sbjct: 439 ----DSPTSSAFYNALTDVLWHFGQRRKAQQVVFEGINRRVWENTWGE-----FCLDLHL 489

Query: 761 MSDGTAVIALSRTLAWFRKQMLISGVGPSRIDIVTGWGRRSRVTGTSLVRQAVQELLHMF 820
           MS G A   +   L   R  +      P  + I+TGWG+ SR+ G S +R+ ++ LL+  
Sbjct: 490 MSCGAAQAMVHAWLLNVRSIVFEGRAMPEFLSILTGWGKHSRIAGASTLRRVIEALLNSI 549

Query: 821 SFPFFTENGNSGCFVGCGEPLNKWLLQS 848
             PF  E  N G FV     +  WL +S
Sbjct: 550 GAPFQVERFNIGRFVSPSAVVAAWLRES 577



 Score =  138 bits (348), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 81/263 (30%), Positives = 136/263 (51%)

Query: 385 QMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAG 444
           QM++DG  P+  T+N L+ +  R  +L +A  VF +M  +G   D  TY T ID   K G
Sbjct: 42  QMLKDGLCPDRKTFNSLLAACSRVGHLEDARAVFDEMIHLGIGRDIYTYNTFIDAICKCG 101

Query: 445 FLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYN 504
            +++AM +   M+A G+ P+  TYS +I+   K    + A +L  +M +     + V YN
Sbjct: 102 NMELAMQVLLDMEAKGVKPNVVTYSTLIDGYSKLEKYEEALKLCEKMKSMRIQLDRVCYN 161

Query: 505 IMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRK 564
            ++A+  KA  Y     +  +M+  G E D VTY+ ++   G  G LD    +  +MR++
Sbjct: 162 TLLAIYVKAGKYAEIANVCDEMEELGIEKDTVTYNSLINGYGKQGRLDIVSILVQDMRKR 221

Query: 565 NWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDA 624
              P    Y  L+D++ KAG    A+  Y    ++GL+P+V   +S +    + G +  A
Sbjct: 222 GVAPSVLTYSTLIDIYSKAGMHGDAFNVYLDFKESGLKPDVVLFSSFIDTLAKNGLIEWA 281

Query: 625 YHLLQGMLNLGLKPSLQTYTLLL 647
             LL  M  +G+KP++ TY  ++
Sbjct: 282 LSLLNDMTEMGIKPNVVTYNAII 304



 Score =  107 bits (268), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 67/240 (27%), Positives = 121/240 (50%), Gaps = 1/240 (0%)

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGF-LDVAMDMYKKMQAAGLSPDTFTYSVIIN 473
           + V + M+  G  P  V+Y  +ID   K G  L   +  +++M   GL PD  T++ ++ 
Sbjct: 1   MGVLESMKGAGLRPTTVSYNAVIDACGKGGVDLRFTLGYFRQMLKDGLCPDRKTFNSLLA 60

Query: 474 CLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEP 533
              + GHL+ A  +F EM++ G   ++ TYN  I    K  N + A+++  DM+  G +P
Sbjct: 61  ACSRVGHLEDARAVFDEMIHLGIGRDIYTYNTFIDAICKCGNMELAMQVLLDMEAKGVKP 120

Query: 534 DKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWY 593
           + VTYS +++        +EA  +  +M+      D   Y  L+ ++ KAG   +     
Sbjct: 121 NVVTYSTLIDGYSKLEKYEEALKLCEKMKSMRIQLDRVCYNTLLAIYVKAGKYAEIANVC 180

Query: 594 EAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEA 653
           + M + G+  +  T NSL++ + + G+L     L+Q M   G+ PS+ TY+ L+   ++A
Sbjct: 181 DEMEELGIEKDTVTYNSLINGYGKQGRLDIVSILVQDMRKRGVAPSVLTYSTLIDIYSKA 240



 Score = 98.6 bits (244), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 67/276 (24%), Positives = 124/276 (44%), Gaps = 17/276 (6%)

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
           + G + D  TY +++   G+  +   ++ L+  M + G  P+V+TY+ LI  Y +A    
Sbjct: 185 ELGIEKDTVTYNSLINGYGKQGRLDIVSILVQDMRKRGVAPSVLTYSTLIDIYSKAGMHG 244

Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
           +A +V+   +  G +PD V + + ID  AK G ++ A+ +   M   G+ P+  TY+ II
Sbjct: 245 DAFNVYLDFKESGLKPDVVLFSSFIDTLAKNGLIEWALSLLNDMTEMGIKPNVVTYNAII 304

Query: 473 NCLGKAGHLQAAHQLFCEMVNQGC-------IPNLVTYNIMIALQAKARNYQS---ALKL 522
           +  GK+  +        +M   G        + N V+     A   + R  Q     L+L
Sbjct: 305 DAFGKSKVMMEDDSEVGDMGIVGVYGGQIVRVANPVSRGGRSATDVRMRRSQELFFILEL 364

Query: 523 YRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGK 582
           ++ M   G  P+ VT+S ++     C   ++A  +  ++R  +       YGLLV     
Sbjct: 365 FQKMVQQGVRPNVVTFSAILNACSRCNSFEDAALLLEQLRLFDNFVYGVAYGLLV----- 419

Query: 583 AGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRV 618
               R+ W   +++     R + PT ++  +A   V
Sbjct: 420 --GSREVWSQAQSLFNQLGRMDSPTSSAFYNALTDV 453



 Score = 60.1 bits (144), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 59/252 (23%), Positives = 106/252 (42%), Gaps = 21/252 (8%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFG-AINKLLDQMVRDGCQPNVVTYNRLIHSYGRANY 410
           R+ G      TY+T++ I  +A   G A N  LD     G +P+VV ++  I +  +   
Sbjct: 219 RKRGVAPSVLTYSTLIDIYSKAGMHGDAFNVYLD-FKESGLKPDVVLFSSFIDTLAKNGL 277

Query: 411 LNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSV 470
           +  AL +   M  +G +P+ VTY  +ID   K+  +         M   G+         
Sbjct: 278 IEWALSLLNDMTEMGIKPNVVTYNAIIDAFGKSKVMMEDDSEVGDMGIVGVYGGQIVR-- 335

Query: 471 IINCLGKAG------------HLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQS 518
           + N + + G             L    +LF +MV QG  PN+VT++ ++   ++  +++ 
Sbjct: 336 VANPVSRGGRSATDVRMRRSQELFFILELFQKMVQQGVRPNVVTFSAILNACSRCNSFED 395

Query: 519 ALKLYRDMQNAGFEPDKVTYSIVMEVL-GHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLV 577
           A  L   ++      D   Y +   +L G      +A+++F ++ R +       Y  L 
Sbjct: 396 AALLLEQLRLF----DNFVYGVAYGLLVGSREVWSQAQSLFNQLGRMDSPTSSAFYNALT 451

Query: 578 DLWGKAGNVRKA 589
           D+    G  RKA
Sbjct: 452 DVLWHFGQRRKA 463


>gi|225457182|ref|XP_002280557.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74850,
           chloroplastic [Vitis vinifera]
          Length = 869

 Score =  173 bits (438), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 102/354 (28%), Positives = 176/354 (49%), Gaps = 36/354 (10%)

Query: 336 QLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRAR--------------------- 374
           Q  D   +L  F +++RQ   K +EH YT M+G+LGR                       
Sbjct: 122 QRGDWQRSLRLFKYMQRQIWCKPNEHIYTIMIGVLGREGLLEKCQEIFDEMPSHGVAPSV 181

Query: 375 --------------QFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANY-LNEALDVFK 419
                         Q+ +  +LLD+M ++   P+++TYN +I+S  R      E L +F 
Sbjct: 182 FSFTALINAYGRNGQYKSSLELLDRMKKERVSPSILTYNTVINSCARGGLDWEELLGLFA 241

Query: 420 QMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAG 479
           QM+  G + D VTY TL+   A+ G  D A  +++ M   G+ PD  TYS ++   GK  
Sbjct: 242 QMRHEGIQADIVTYNTLLSACARRGLGDEAEMVFRTMNEGGILPDITTYSYLVETFGKLN 301

Query: 480 HLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYS 539
            L+   +L  EM + G  P++ +YN+++   A++ + + A+ ++R MQ AG  P+  TYS
Sbjct: 302 RLEKVSELLKEMESGGSFPDITSYNVLLEAHAQSGSIKEAMGVFRQMQGAGCVPNAATYS 361

Query: 540 IVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQA 599
           I++ + G  G  D+   +F EM+  N  P+   Y +L++++G+ G  ++    +  M++ 
Sbjct: 362 ILLNLYGRHGRYDDVRDLFLEMKVSNTEPNAATYNILINVFGEGGYFKEVVTLFHDMVEE 421

Query: 600 GLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEA 653
            + PN+ T   L+ A  + G   DA  +L  M   G+ PS + YT ++    +A
Sbjct: 422 NVEPNMETYEGLIFACGKGGLHEDAKKILLHMNEKGVVPSSKAYTGVIEAYGQA 475



 Score =  162 bits (411), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 126/525 (24%), Positives = 227/525 (43%), Gaps = 53/525 (10%)

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
           + G   D  TY+ +V   G+  +   +++LL +M   G  P++ +YN L+ ++ ++  + 
Sbjct: 280 EGGILPDITTYSYLVETFGKLNRLEKVSELLKEMESGGSFPDITSYNVLLEAHAQSGSIK 339

Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
           EA+ VF+QMQ  GC P+  TY  L++++ + G  D   D++ +M+ +   P+  TY+++I
Sbjct: 340 EAMGVFRQMQGAGCVPNAATYSILLNLYGRHGRYDDVRDLFLEMKVSNTEPNAATYNILI 399

Query: 473 NCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFE 532
           N  G+ G+ +    LF +MV +   PN+ TY  +I    K   ++ A K+   M   G  
Sbjct: 400 NVFGEGGYFKEVVTLFHDMVEENVEPNMETYEGLIFACGKGGLHEDAKKILLHMNEKGVV 459

Query: 533 PDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEW 592
           P    Y+ V+E  G     +EA   F  M      P    Y  L+ ++ K G  +++   
Sbjct: 460 PSSKAYTGVIEAYGQAALYEEALVAFNTMNEVGSKPTVETYNSLIQMFAKGGLYKESEAI 519

Query: 593 YEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAY---------------HLLQGMLN---- 633
              M Q+G+  N  T N ++ AF + GQ  +A                  L+ +L+    
Sbjct: 520 LLKMGQSGVARNRDTFNGVIEAFRQGGQFEEAIKAYVEMEKARCDPDEQTLEAVLSVYCF 579

Query: 634 ----------------LGLKPSLQTYTLLLSCCTEARSPYDM-GFCHELMAVSGHPAHMF 676
                           LG+ PS+  Y ++L+   +A    D      E+        H  
Sbjct: 580 AGLVEESEEQFGEIKALGILPSVMCYCMMLAVYAKADRWDDAHQLLDEMFTNRVSNIHQV 639

Query: 677 LLSMPSPGPDGQNVRDHVGSFLEMMHSEDRESKRGLVDAVVDFLHKSGLKEEAGSVWEVA 736
           +  M     D  +    V    E + SE         + +++ L   G KE A  V   A
Sbjct: 640 IGQMIRGDYDDDSNWQMVEYVFEKLKSEGCSLGVRFYNTLLEALWWLGQKERATRVLNEA 699

Query: 737 AQKNVYPDAVKEKGMSYWLINLHVMSDGTAVIALSRTLAWFRK--QMLISGVGPSRID-- 792
            ++ ++P+  ++  +  W +++H M +G A  A+S    W     +M ISG    ++   
Sbjct: 700 TKRGLFPELFRKNKL-VWSVDVHRMWEGAACTAIS---VWLNNMHEMFISGDDLPQLASA 755

Query: 793 -IVTGWGRRSRVTGTSLVRQAVQELLHMFSFPFFTENGNSGCFVG 836
            +V G   +S +T    V ++        ++ F  E  +S CF G
Sbjct: 756 VVVRGHMEKSSITRDFPVAKS--------AYAFLNEVSSSFCFPG 792



 Score =  152 bits (384), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 85/300 (28%), Positives = 149/300 (49%), Gaps = 1/300 (0%)

Query: 344 LGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIH 403
           LG F  +R + G + D  TY T++    R         +   M   G  P++ TY+ L+ 
Sbjct: 237 LGLFAQMRHE-GIQADIVTYNTLLSACARRGLGDEAEMVFRTMNEGGILPDITTYSYLVE 295

Query: 404 SYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSP 463
           ++G+ N L +  ++ K+M+  G  PD  +Y  L++ HA++G +  AM ++++MQ AG  P
Sbjct: 296 TFGKLNRLEKVSELLKEMESGGSFPDITSYNVLLEAHAQSGSIKEAMGVFRQMQGAGCVP 355

Query: 464 DTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLY 523
           +  TYS+++N  G+ G       LF EM      PN  TYNI+I +  +   ++  + L+
Sbjct: 356 NAATYSILLNLYGRHGRYDDVRDLFLEMKVSNTEPNAATYNILINVFGEGGYFKEVVTLF 415

Query: 524 RDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKA 583
            DM     EP+  TY  ++   G  G  ++A+ +   M  K  VP    Y  +++ +G+A
Sbjct: 416 HDMVEENVEPNMETYEGLIFACGKGGLHEDAKKILLHMNEKGVVPSSKAYTGVIEAYGQA 475

Query: 584 GNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTY 643
               +A   +  M + G +P V T NSL+  F + G   ++  +L  M   G+  +  T+
Sbjct: 476 ALYEEALVAFNTMNEVGSKPTVETYNSLIQMFAKGGLYKESEAILLKMGQSGVARNRDTF 535



 Score = 92.8 bits (229), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 79/345 (22%), Positives = 156/345 (45%), Gaps = 16/345 (4%)

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQ-AAGLSPDTFTYSVIIN 473
           LDVFK    +        +  +    A+ G    ++ ++K MQ      P+   Y+++I 
Sbjct: 101 LDVFKNKLSLN------DFALVFKEFAQRGDWQRSLRLFKYMQRQIWCKPNEHIYTIMIG 154

Query: 474 CLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEP 533
            LG+ G L+   ++F EM + G  P++ ++  +I    +   Y+S+L+L   M+     P
Sbjct: 155 VLGREGLLEKCQEIFDEMPSHGVAPSVFSFTALINAYGRNGQYKSSLELLDRMKKERVSP 214

Query: 534 DKVTYSIVMEVLGHCGY-LDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEW 592
             +TY+ V+      G   +E   +FA+MR +    D   Y  L+    + G   +A   
Sbjct: 215 SILTYNTVINSCARGGLDWEELLGLFAQMRHEGIQADIVTYNTLLSACARRGLGDEAEMV 274

Query: 593 YEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTE 652
           +  M + G+ P++ T + L+  F ++ +L     LL+ M + G  P + +Y +LL    +
Sbjct: 275 FRTMNEGGILPDITTYSYLVETFGKLNRLEKVSELLKEMESGGSFPDITSYNVLLEAHAQ 334

Query: 653 ARSPYD-MGFCHELMAVSGHP---AHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRES 708
           + S  + MG   ++      P    +  LL++        +VRD    FLEM  S + E 
Sbjct: 335 SGSIKEAMGVFRQMQGAGCVPNAATYSILLNLYGRHGRYDDVRD---LFLEMKVS-NTEP 390

Query: 709 KRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAVKEKGMSY 753
                + +++   + G  +E  +++    ++NV P+    +G+ +
Sbjct: 391 NAATYNILINVFGEGGYFKEVVTLFHDMVEENVEPNMETYEGLIF 435


>gi|449463537|ref|XP_004149490.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At2g02150-like [Cucumis sativus]
          Length = 786

 Score =  172 bits (437), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 126/508 (24%), Positives = 219/508 (43%), Gaps = 66/508 (12%)

Query: 338 QDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMV---------- 387
           +D  +AL FF W   Q GF+H   +Y  +V ++ RAR +   +  + +++          
Sbjct: 141 EDPKLALKFFKWAGSQVGFRHTTESYCIIVHLVFRARMYTDAHDTVKEVIMNSRMDMGFP 200

Query: 388 -----------RDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQM--------------- 421
                      R+ C      ++ L   +     L EA + F +M               
Sbjct: 201 VCNIFDMLWSTRNICVSGSGVFDVLFSVFVELGLLEEANECFSRMRNFRTLPKARSCNFL 260

Query: 422 ----------QVV----------GCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGL 461
                     Q+V          G  P   TY  +ID   K G L+ +  ++ +M+  GL
Sbjct: 261 LHRLSKSGNGQLVRKFFNDMIGAGIAPSVFTYNVMIDYLCKEGDLENSRRLFVQMREMGL 320

Query: 462 SPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALK 521
           SPD  TY+ +I+  GK G L+    LF EM + GC+P+++TYN +I    K      A +
Sbjct: 321 SPDVVTYNSLIDGYGKVGSLEEVASLFNEMKDVGCVPDIITYNGLINCYCKFEKMPRAFE 380

Query: 522 LYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWG 581
            + +M+N G +P+ VTYS +++     G +  A  +F +MRR   +P+E  Y  L+D   
Sbjct: 381 YFSEMKNNGLKPNVVTYSTLIDAFCKEGMMQGAIKLFVDMRRTGLLPNEFTYTSLIDANC 440

Query: 582 KAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQ 641
           KAGN+ +AW+    MLQAG++ N+ T  +LL    + G++ +A  + + ML  G+ P+ Q
Sbjct: 441 KAGNLTEAWKLLNDMLQAGVKLNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQ 500

Query: 642 TYTLLLSCCTEARSPYDMGFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMM 701
            YT L+    +A    D     + M        + L      G   Q   +     LE M
Sbjct: 501 VYTALVHGYIKAERMEDAMKILKQMTECNIKPDLILYGSIIWGHCSQRKLEETKLILEEM 560

Query: 702 HSEDRESKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAVKEKGMSYWLINLHVM 761
            S    +   +   ++D   K+G   +A + ++           +++ G+   ++   V+
Sbjct: 561 KSRGISANPVISTTIIDAYFKAGKSSDALNFFQ----------EMQDVGVEATIVTYCVL 610

Query: 762 SDGTAVIALSRTLAWFRKQMLISGVGPS 789
            DG     +      +  +ML  G+ P+
Sbjct: 611 IDGLCKAGIVELAVDYFCRMLSLGLQPN 638



 Score =  134 bits (338), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 89/319 (27%), Positives = 146/319 (45%), Gaps = 35/319 (10%)

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
           QAG K +  TYT ++  L +A +     ++   M++DG  PN   Y  L+H Y +A  + 
Sbjct: 457 QAGVKLNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTALVHGYIKAERME 516

Query: 413 EALDVFKQMQVVGCEPDRVTY-----------------------------------CTLI 437
           +A+ + KQM     +PD + Y                                    T+I
Sbjct: 517 DAMKILKQMTECNIKPDLILYGSIIWGHCSQRKLEETKLILEEMKSRGISANPVISTTII 576

Query: 438 DIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCI 497
           D + KAG    A++ +++MQ  G+     TY V+I+ L KAG ++ A   FC M++ G  
Sbjct: 577 DAYFKAGKSSDALNFFQEMQDVGVEATIVTYCVLIDGLCKAGIVELAVDYFCRMLSLGLQ 636

Query: 498 PNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAV 557
           PN+  Y  +I    K    +SA KL+ +MQ  G  PD   ++ +++     G L EA  +
Sbjct: 637 PNVAVYTSLIDGLCKNNCIESAKKLFDEMQCRGMTPDITAFTALIDGNLKHGNLQEALVL 696

Query: 558 FAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLR 617
            + M       D  VY  LV  + + G + +A +++  M++ G+ P    C  LL  + +
Sbjct: 697 ISRMTELAIEFDLHVYTSLVSGFSQCGELHQARKFFNEMIEKGILPEEVLCICLLREYYK 756

Query: 618 VGQLSDAYHLLQGMLNLGL 636
            GQL +A  L   M  +GL
Sbjct: 757 RGQLDEAIELKNEMERMGL 775



 Score = 79.3 bits (194), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 61/252 (24%), Positives = 106/252 (42%), Gaps = 35/252 (13%)

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
           +   K D   Y +++      R+      +L++M   G   N V    +I +Y +A   +
Sbjct: 527 ECNIKPDLILYGSIIWGHCSQRKLEETKLILEEMKSRGISANPVISTTIIDAYFKAGKSS 586

Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMD--------------------- 451
           +AL+ F++MQ VG E   VTYC LID   KAG +++A+D                     
Sbjct: 587 DALNFFQEMQDVGVEATIVTYCVLIDGLCKAGIVELAVDYFCRMLSLGLQPNVAVYTSLI 646

Query: 452 --------------MYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCI 497
                         ++ +MQ  G++PD   ++ +I+   K G+LQ A  L   M      
Sbjct: 647 DGLCKNNCIESAKKLFDEMQCRGMTPDITAFTALIDGNLKHGNLQEALVLISRMTELAIE 706

Query: 498 PNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAV 557
            +L  Y  +++  ++      A K + +M   G  P++V    ++      G LDEA  +
Sbjct: 707 FDLHVYTSLVSGFSQCGELHQARKFFNEMIEKGILPEEVLCICLLREYYKRGQLDEAIEL 766

Query: 558 FAEMRRKNWVPD 569
             EM R   + +
Sbjct: 767 KNEMERMGLITE 778



 Score = 77.0 bits (188), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 53/198 (26%), Positives = 89/198 (44%), Gaps = 7/198 (3%)

Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLD---QMVRDGCQPNVVTYN 399
           AL FF  ++   G +    TY  ++  L +A   G +   +D   +M+  G QPNV  Y 
Sbjct: 588 ALNFFQEMQ-DVGVEATIVTYCVLIDGLCKA---GIVELAVDYFCRMLSLGLQPNVAVYT 643

Query: 400 RLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAA 459
            LI    + N +  A  +F +MQ  G  PD   +  LID + K G L  A+ +  +M   
Sbjct: 644 SLIDGLCKNNCIESAKKLFDEMQCRGMTPDITAFTALIDGNLKHGNLQEALVLISRMTEL 703

Query: 460 GLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSA 519
            +  D   Y+ +++   + G L  A + F EM+ +G +P  V    ++    K      A
Sbjct: 704 AIEFDLHVYTSLVSGFSQCGELHQARKFFNEMIEKGILPEEVLCICLLREYYKRGQLDEA 763

Query: 520 LKLYRDMQNAGFEPDKVT 537
           ++L  +M+  G   +  T
Sbjct: 764 IELKNEMERMGLITESAT 781


>gi|242069905|ref|XP_002450229.1| hypothetical protein SORBIDRAFT_05g002220 [Sorghum bicolor]
 gi|241936072|gb|EES09217.1| hypothetical protein SORBIDRAFT_05g002220 [Sorghum bicolor]
          Length = 797

 Score =  172 bits (437), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 114/413 (27%), Positives = 195/413 (47%), Gaps = 11/413 (2%)

Query: 355 GFKHDEHTYTTMVGIL---GRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           G K D +TY +++  L   GR R+      L D M+R G +PNV  Y  LIH Y     L
Sbjct: 303 GLKPDCYTYGSLLNYLCNNGRCRE---ARFLFDSMIRKGIKPNVAIYGILIHGYATKGAL 359

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
           +E  D+   M   G  PD   +  +   +AK   +D AM ++ KM+  GLSPD   Y  +
Sbjct: 360 SEMHDLLNLMVENGLSPDHHIFNIIFTAYAKKAMIDEAMHIFNKMKQQGLSPDVVNYGAL 419

Query: 472 INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF 531
           I+ L K G +  A   F +M+N+G  PN+  +N ++        ++ A + Y +M N G 
Sbjct: 420 IDALCKLGRVDDAVLKFNQMMNEGVAPNIFVFNSLVYGLCTVDKWEKAKEFYFEMLNQGI 479

Query: 532 EPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWE 591
            PD V ++ ++  L   G + +A+ +   M R    P    Y  L+      G + +A +
Sbjct: 480 RPDVVFFNTILCNLCTKGQVMKAQRLIDLMERVGTRPGVISYTTLIGGHCLVGRIDEAAK 539

Query: 592 WYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCT 651
             + ML  GL+P+  T N+LL  + R G++ DAY + + ML  G+ P + TY+ +L    
Sbjct: 540 SLDVMLSVGLKPDEWTYNTLLHGYCRAGRIDDAYGVFREMLRNGITPGVVTYSTILHGLF 599

Query: 652 EARSPYDMGFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRESKRG 711
             R   +    +  M  SG   ++++ ++   G    N  D      + + S+D + +  
Sbjct: 600 TTRRFSEAKELYLNMITSGKQWNIWIYNIILNGLSKNNCVDEAFKLFQSLCSKDFQLEIT 659

Query: 712 LVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAVKEKGMSYWLINLHVMSDG 764
             + ++  L KSG  E+A  ++   +   + PD       +Y LI  +++ +G
Sbjct: 660 TFNIMIGALFKSGRNEDAMHLFATISSYGLVPDV-----FTYCLIAENLIEEG 707



 Score =  132 bits (332), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 77/283 (27%), Positives = 141/283 (49%), Gaps = 3/283 (1%)

Query: 368 GILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQM---QVV 424
           G+    R   A++ L+ +M   GC P+VV+YN L+  +       EAL++   M   Q  
Sbjct: 138 GLCDAKRLCEAMDILVKRMPELGCTPDVVSYNTLLKGFCNEKRAEEALELLHMMADSQGR 197

Query: 425 GCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAA 484
            C P+ V+Y  +I+     G +D A +++ +M   G+ P+  TY+ +I+ L KA  +  A
Sbjct: 198 SCPPNVVSYAIVINGFFTEGQVDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQVVDRA 257

Query: 485 HQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEV 544
             +F +M+++G  P+  TYN +I        ++  +++  +M   G +PD  TY  ++  
Sbjct: 258 EGVFQQMIDKGVKPDNDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLNY 317

Query: 545 LGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPN 604
           L + G   EA  +F  M RK   P+  +YG+L+  +   G + +  +    M++ GL P+
Sbjct: 318 LCNNGRCREARFLFDSMIRKGIKPNVAIYGILIHGYATKGALSEMHDLLNLMVENGLSPD 377

Query: 605 VPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
               N + +A+ +   + +A H+   M   GL P +  Y  L+
Sbjct: 378 HHIFNIIFTAYAKKAMIDEAMHIFNKMKQQGLSPDVVNYGALI 420



 Score =  129 bits (325), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 84/313 (26%), Positives = 150/313 (47%), Gaps = 6/313 (1%)

Query: 342 VALGFFNWLRRQAGFK--HDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYN 399
           + +  FN + R+   K   D  TY+ ++G   R  +          +++ G + N +  N
Sbjct: 74  LVVSLFNRMIRECTIKVTPDPCTYSILIGCFCRMGRLEHGFATFGLILKSGWRVNNIVIN 133

Query: 400 RLIHSYGRANYLNEALDVF-KQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKM-- 456
           +L+     A  L EA+D+  K+M  +GC PD V+Y TL+         + A+++   M  
Sbjct: 134 QLLKGLCDAKRLCEAMDILVKRMPELGCTPDVVSYNTLLKGFCNEKRAEEALELLHMMAD 193

Query: 457 -QAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARN 515
            Q     P+  +Y+++IN     G +  A+ LF EM+++G  PN+VTY  +I    KA+ 
Sbjct: 194 SQGRSCPPNVVSYAIVINGFFTEGQVDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQV 253

Query: 516 YQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGL 575
              A  +++ M + G +PD  TY+ ++      G   E   +  EM      PD   YG 
Sbjct: 254 VDRAEGVFQQMIDKGVKPDNDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGS 313

Query: 576 LVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLG 635
           L++     G  R+A   +++M++ G++PNV     L+  +   G LS+ + LL  M+  G
Sbjct: 314 LLNYLCNNGRCREARFLFDSMIRKGIKPNVAIYGILIHGYATKGALSEMHDLLNLMVENG 373

Query: 636 LKPSLQTYTLLLS 648
           L P    + ++ +
Sbjct: 374 LSPDHHIFNIIFT 386



 Score =  125 bits (313), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 101/368 (27%), Positives = 159/368 (43%), Gaps = 46/368 (12%)

Query: 331 NQVLKQLQDHTVALGFFNWLRR---QAGFKHDEHTYTTMV-GILGRARQFGAINKLLDQM 386
           NQ+LK L D        + L +   + G   D  +Y T++ G     R   A+  L   M
Sbjct: 133 NQLLKGLCDAKRLCEAMDILVKRMPELGCTPDVVSYNTLLKGFCNEKRAEEALELL--HM 190

Query: 387 VRDG----CQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAK 442
           + D     C PNVV+Y  +I+ +     +++A ++F +M   G +P+ VTY T+ID   K
Sbjct: 191 MADSQGRSCPPNVVSYAIVINGFFTEGQVDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCK 250

Query: 443 AGFLDVA-----------------------------------MDMYKKMQAAGLSPDTFT 467
           A  +D A                                   + M ++M A GL PD +T
Sbjct: 251 AQVVDRAEGVFQQMIDKGVKPDNDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYT 310

Query: 468 YSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQ 527
           Y  ++N L   G  + A  LF  M+ +G  PN+  Y I+I   A          L   M 
Sbjct: 311 YGSLLNYLCNNGRCREARFLFDSMIRKGIKPNVAIYGILIHGYATKGALSEMHDLLNLMV 370

Query: 528 NAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVR 587
             G  PD   ++I+         +DEA  +F +M+++   PD   YG L+D   K G V 
Sbjct: 371 ENGLSPDHHIFNIIFTAYAKKAMIDEAMHIFNKMKQQGLSPDVVNYGALIDALCKLGRVD 430

Query: 588 KAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTY-TLL 646
            A   +  M+  G+ PN+   NSL+     V +   A      MLN G++P +  + T+L
Sbjct: 431 DAVLKFNQMMNEGVAPNIFVFNSLVYGLCTVDKWEKAKEFYFEMLNQGIRPDVVFFNTIL 490

Query: 647 LSCCTEAR 654
            + CT+ +
Sbjct: 491 CNLCTKGQ 498



 Score =  114 bits (286), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 76/279 (27%), Positives = 137/279 (49%), Gaps = 2/279 (0%)

Query: 346 FFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSY 405
           +F  L +  G + D   + T++  L    Q     +L+D M R G +P V++Y  LI  +
Sbjct: 471 YFEMLNQ--GIRPDVVFFNTILCNLCTKGQVMKAQRLIDLMERVGTRPGVISYTTLIGGH 528

Query: 406 GRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDT 465
                ++EA      M  VG +PD  TY TL+  + +AG +D A  ++++M   G++P  
Sbjct: 529 CLVGRIDEAAKSLDVMLSVGLKPDEWTYNTLLHGYCRAGRIDDAYGVFREMLRNGITPGV 588

Query: 466 FTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRD 525
            TYS I++ L        A +L+  M+  G   N+  YNI++   +K      A KL++ 
Sbjct: 589 VTYSTILHGLFTTRRFSEAKELYLNMITSGKQWNIWIYNIILNGLSKNNCVDEAFKLFQS 648

Query: 526 MQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGN 585
           + +  F+ +  T++I++  L   G  ++A  +FA +     VPD   Y L+ +   + G 
Sbjct: 649 LCSKDFQLEITTFNIMIGALFKSGRNEDAMHLFATISSYGLVPDVFTYCLIAENLIEEGY 708

Query: 586 VRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDA 624
           + +  + + AM ++G  PN    N+L+   L  G ++ A
Sbjct: 709 LEEFDDLFSAMEKSGTTPNSRMLNALVRRLLHRGDITRA 747



 Score =  102 bits (255), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 65/255 (25%), Positives = 122/255 (47%)

Query: 385 QMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAG 444
           +M+  G +P+VV +N ++ +      + +A  +   M+ VG  P  ++Y TLI  H   G
Sbjct: 473 EMLNQGIRPDVVFFNTILCNLCTKGQVMKAQRLIDLMERVGTRPGVISYTTLIGGHCLVG 532

Query: 445 FLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYN 504
            +D A      M + GL PD +TY+ +++   +AG +  A+ +F EM+  G  P +VTY+
Sbjct: 533 RIDEAAKSLDVMLSVGLKPDEWTYNTLLHGYCRAGRIDDAYGVFREMLRNGITPGVVTYS 592

Query: 505 IMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRK 564
            ++      R +  A +LY +M  +G + +   Y+I++  L     +DEA  +F  +  K
Sbjct: 593 TILHGLFTTRRFSEAKELYLNMITSGKQWNIWIYNIILNGLSKNNCVDEAFKLFQSLCSK 652

Query: 565 NWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDA 624
           ++  +   + +++    K+G    A   +  +   GL P+V T   +    +  G L + 
Sbjct: 653 DFQLEITTFNIMIGALFKSGRNEDAMHLFATISSYGLVPDVFTYCLIAENLIEEGYLEEF 712

Query: 625 YHLLQGMLNLGLKPS 639
             L   M   G  P+
Sbjct: 713 DDLFSAMEKSGTTPN 727



 Score = 99.4 bits (246), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 71/306 (23%), Positives = 139/306 (45%), Gaps = 5/306 (1%)

Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLI 402
           A+  FN +++Q G   D   Y  ++  L +  +        +QM+ +G  PN+  +N L+
Sbjct: 397 AMHIFNKMKQQ-GLSPDVVNYGALIDALCKLGRVDDAVLKFNQMMNEGVAPNIFVFNSLV 455

Query: 403 HSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLS 462
           +     +   +A + + +M   G  PD V + T++      G +  A  +   M+  G  
Sbjct: 456 YGLCTVDKWEKAKEFYFEMLNQGIRPDVVFFNTILCNLCTKGQVMKAQRLIDLMERVGTR 515

Query: 463 PDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKL 522
           P   +Y+ +I      G +  A +    M++ G  P+  TYN ++    +A     A  +
Sbjct: 516 PGVISYTTLIGGHCLVGRIDEAAKSLDVMLSVGLKPDEWTYNTLLHGYCRAGRIDDAYGV 575

Query: 523 YRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEM--RRKNWVPDEPVYGLLVDLW 580
           +R+M   G  P  VTYS ++  L       EA+ ++  M    K W  +  +Y ++++  
Sbjct: 576 FREMLRNGITPGVVTYSTILHGLFTTRRFSEAKELYLNMITSGKQW--NIWIYNIILNGL 633

Query: 581 GKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSL 640
            K   V +A++ ++++     +  + T N ++ A  + G+  DA HL   + + GL P +
Sbjct: 634 SKNNCVDEAFKLFQSLCSKDFQLEITTFNIMIGALFKSGRNEDAMHLFATISSYGLVPDV 693

Query: 641 QTYTLL 646
            TY L+
Sbjct: 694 FTYCLI 699



 Score = 78.6 bits (192), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 54/230 (23%), Positives = 108/230 (46%), Gaps = 2/230 (0%)

Query: 354 AGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNE 413
            G K DE TY T++    RA +      +  +M+R+G  P VVTY+ ++H        +E
Sbjct: 547 VGLKPDEWTYNTLLHGYCRAGRIDDAYGVFREMLRNGITPGVVTYSTILHGLFTTRRFSE 606

Query: 414 ALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIIN 473
           A +++  M   G + +   Y  +++  +K   +D A  +++ + +     +  T++++I 
Sbjct: 607 AKELYLNMITSGKQWNIWIYNIILNGLSKNNCVDEAFKLFQSLCSKDFQLEITTFNIMIG 666

Query: 474 CLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALK-LYRDMQNAGFE 532
            L K+G  + A  LF  + + G +P++ TY  +IA       Y      L+  M+ +G  
Sbjct: 667 ALFKSGRNEDAMHLFATISSYGLVPDVFTY-CLIAENLIEEGYLEEFDDLFSAMEKSGTT 725

Query: 533 PDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGK 582
           P+    + ++  L H G +  A A   ++  KN+  +     +L+ L  +
Sbjct: 726 PNSRMLNALVRRLLHRGDITRAGAYLCKLDEKNFSLEASTTAMLISLLSR 775



 Score = 53.9 bits (128), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 62/299 (20%), Positives = 119/299 (39%), Gaps = 59/299 (19%)

Query: 461 LSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSAL 520
           ++PD  TYS++I C  + G L+     F  ++  G   N +  N ++     A+    A+
Sbjct: 90  VTPDPCTYSILIGCFCRMGRLEHGFATFGLILKSGWRVNNIVINQLLKGLCDAKRLCEAM 149

Query: 521 K-LYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDL 579
             L + M   G  PD V+Y+ +++     G+ +E  A                       
Sbjct: 150 DILVKRMPELGCTPDVVSYNTLLK-----GFCNEKRA----------------------- 181

Query: 580 WGKAGNVRKAWEWYEAMLQAGLR---PNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGL 636
                   +A E    M  +  R   PNV +   +++ F   GQ+  AY+L   M++ G+
Sbjct: 182 -------EEALELLHMMADSQGRSCPPNVVSYAIVINGFFTEGQVDKAYNLFLEMMDRGI 234

Query: 637 KPSLQTYTLLLSCCTEARSPYDMGFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDH--- 693
           +P++ TYT ++    +A+         + M   G            P  D  N   H   
Sbjct: 235 QPNVVTYTTVIDGLCKAQVVDRAEGVFQQMIDKG----------VKPDNDTYNCLIHGYL 284

Query: 694 -VGSFLEMMHSEDRESKRGL------VDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDA 745
            +G + E++   +  S  GL        +++++L  +G   EA  +++   +K + P+ 
Sbjct: 285 SIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNNGRCREARFLFDSMIRKGIKPNV 343



 Score = 50.1 bits (118), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 47/225 (20%), Positives = 92/225 (40%), Gaps = 39/225 (17%)

Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLI 402
           A G F  + R  G      TY+T++  L   R+F    +L   M+  G Q N+  YN ++
Sbjct: 572 AYGVFREMLRN-GITPGVVTYSTILHGLFTTRRFSEAKELYLNMITSGKQWNIWIYNIIL 630

Query: 403 HSYGRANYLNEALDVFK-------QMQVV----------------------------GCE 427
           +   + N ++EA  +F+       Q+++                             G  
Sbjct: 631 NGLSKNNCVDEAFKLFQSLCSKDFQLEITTFNIMIGALFKSGRNEDAMHLFATISSYGLV 690

Query: 428 PDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQL 487
           PD  TYC + +   + G+L+   D++  M+ +G +P++   + ++  L   G +  A   
Sbjct: 691 PDVFTYCLIAENLIEEGYLEEFDDLFSAMEKSGTTPNSRMLNALVRRLLHRGDITRAGAY 750

Query: 488 FCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKL---YRDMQNA 529
            C++  +       T  ++I+L ++   +  A  L   YR +  A
Sbjct: 751 LCKLDEKNFSLEASTTAMLISLLSRDEYHHHATSLPEKYRVLNEA 795


>gi|449455685|ref|XP_004145582.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
           chloroplastic-like [Cucumis sativus]
          Length = 1113

 Score =  172 bits (436), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 98/329 (29%), Positives = 164/329 (49%), Gaps = 2/329 (0%)

Query: 323 YSMDAYQANQVLKQLQDHTVALGFFNWLRRQA--GFKHDEHTYTTMVGILGRARQFGAIN 380
           + ++AY  N ++  L             RR    G K    TY+ ++  LG+ R    + 
Sbjct: 188 FVLNAYSYNGLIHLLIQSGFCGEALEVYRRMVSEGLKPSLKTYSALMVALGKKRDSEMVM 247

Query: 381 KLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIH 440
            LL +M   G +PNV T+   I   GRA  ++EA ++F++M   GC PD VTY  LID  
Sbjct: 248 VLLKEMEDLGLRPNVYTFTICIRVLGRAGKIDEAYEIFRRMDDEGCGPDLVTYTVLIDAL 307

Query: 441 AKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNL 500
             AG L+ A +++ KM+A G  PD   Y  +++     G L    + + +M   G +P++
Sbjct: 308 CNAGQLENAKELFVKMKANGHKPDQVIYITLLDKFNDFGDLDTFKEFWSQMEADGYMPDV 367

Query: 501 VTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAE 560
           VT+ I++ +  KAR++  A   +  M+  G  P+  TY+ ++  L   G +++A  +   
Sbjct: 368 VTFTILVDVLCKARDFDEAFATFDVMRKQGILPNLHTYNTLICGLLRAGRIEDALKLLGT 427

Query: 561 MRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQ 620
           M      P    Y + +D +GK+G   KA E +E M   G+ PN+  CN+ L +   +G+
Sbjct: 428 MESVGVQPTAYTYNIFIDYFGKSGETGKAVETFEKMKAKGIVPNIVACNASLYSLAEMGR 487

Query: 621 LSDAYHLLQGMLNLGLKPSLQTYTLLLSC 649
           L +A  +  G+   GL P   TY +++ C
Sbjct: 488 LREAKTMFNGLRENGLAPDSVTYNMMMKC 516



 Score =  169 bits (427), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 92/304 (30%), Positives = 172/304 (56%), Gaps = 7/304 (2%)

Query: 347 FNWLRRQAGFKHDEHTYTTM---VGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIH 403
           F +++++   + D  TY T+   + I G  RQ   +   L++M + G   N  +YN LIH
Sbjct: 145 FEFMQKKI-IRRDLDTYLTIFKALSIRGGLRQMTTV---LNKMRKAGFVLNAYSYNGLIH 200

Query: 404 SYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSP 463
              ++ +  EAL+V+++M   G +P   TY  L+    K    ++ M + K+M+  GL P
Sbjct: 201 LLIQSGFCGEALEVYRRMVSEGLKPSLKTYSALMVALGKKRDSEMVMVLLKEMEDLGLRP 260

Query: 464 DTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLY 523
           + +T+++ I  LG+AG +  A+++F  M ++GC P+LVTY ++I     A   ++A +L+
Sbjct: 261 NVYTFTICIRVLGRAGKIDEAYEIFRRMDDEGCGPDLVTYTVLIDALCNAGQLENAKELF 320

Query: 524 RDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKA 583
             M+  G +PD+V Y  +++     G LD  +  +++M    ++PD   + +LVD+  KA
Sbjct: 321 VKMKANGHKPDQVIYITLLDKFNDFGDLDTFKEFWSQMEADGYMPDVVTFTILVDVLCKA 380

Query: 584 GNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTY 643
            +  +A+  ++ M + G+ PN+ T N+L+   LR G++ DA  LL  M ++G++P+  TY
Sbjct: 381 RDFDEAFATFDVMRKQGILPNLHTYNTLICGLLRAGRIEDALKLLGTMESVGVQPTAYTY 440

Query: 644 TLLL 647
            + +
Sbjct: 441 NIFI 444



 Score =  166 bits (419), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 94/295 (31%), Positives = 158/295 (53%)

Query: 352  RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
            +  G   D  T+  ++ + G++ +   + +L  +M+   C+P+ +TYN +I S  ++N L
Sbjct: 815  KNVGCAPDAFTFNMLLAVHGKSGKITELFELYKEMISRRCKPDAITYNIVISSLAKSNNL 874

Query: 412  NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
            ++ALD F  +      P   TY  LID  AK G L+ AM ++++M   G  P+   ++++
Sbjct: 875  DKALDFFYDLVSSDFRPTPRTYGPLIDGLAKVGRLEEAMRLFEEMSDYGCKPNCAIFNIL 934

Query: 472  INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF 531
            IN  GK G  + A QLF  MVN+G  P+L +Y I++     A     AL  + ++++ G 
Sbjct: 935  INGYGKIGDTETACQLFKRMVNEGIRPDLKSYTILVDCLCLAGRVDEALYYFNELKSTGL 994

Query: 532  EPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWE 591
            +PD + Y+ ++  LG    ++EA A++ EMR +  VPD   Y  L+   G AG V +A  
Sbjct: 995  DPDFIAYNRIINGLGKSQRMEEALALYNEMRNRGIVPDLYTYNSLMLNLGLAGMVEQAKR 1054

Query: 592  WYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLL 646
             YE +  AGL P+V T N+L+  +        AY + + M+  G  P++ TY  L
Sbjct: 1055 MYEELQLAGLEPDVFTYNALIRGYSLSENPEHAYTVYKNMMVDGCNPNIGTYAQL 1109



 Score =  161 bits (408), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 103/338 (30%), Positives = 168/338 (49%), Gaps = 4/338 (1%)

Query: 349 WLRRQA-GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGR 407
           W + +A G+  D  T+T +V +L +AR F       D M + G  PN+ TYN LI    R
Sbjct: 355 WSQMEADGYMPDVVTFTILVDVLCKARDFDEAFATFDVMRKQGILPNLHTYNTLICGLLR 414

Query: 408 ANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFT 467
           A  + +AL +   M+ VG +P   TY   ID   K+G    A++ ++KM+A G+ P+   
Sbjct: 415 AGRIEDALKLLGTMESVGVQPTAYTYNIFIDYFGKSGETGKAVETFEKMKAKGIVPNIVA 474

Query: 468 YSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQ 527
            +  +  L + G L+ A  +F  +   G  P+ VTYN+M+   +K      A+ L  +M 
Sbjct: 475 CNASLYSLAEMGRLREAKTMFNGLRENGLAPDSVTYNMMMKCYSKVGQVDEAVNLLSEMI 534

Query: 528 NAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVR 587
             G EPD +  + +++ L   G +DEA  +F  M+     P    Y  L+   GK G V+
Sbjct: 535 RNGCEPDVIVVNSLIDSLYKAGRVDEAWQMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQ 594

Query: 588 KAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTY-TLL 646
           KA E +E+M++    PN  + N+LL  F +  ++  A  +   M  +  KP + TY T++
Sbjct: 595 KAIELFESMIEKKCSPNTISFNTLLDCFCKNDEVELALKMFSKMTVMDCKPDVLTYNTVI 654

Query: 647 LSCCTEARSPYDMGFCHELMAVSGHPAHMFLLSMPSPG 684
                E +  +   F H+L   S HP H+ + ++  PG
Sbjct: 655 YGLIKENKVNHAFWFFHQLKK-SMHPDHVTICTL-LPG 690



 Score =  156 bits (394), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 95/339 (28%), Positives = 167/339 (49%)

Query: 332  QVLKQLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGC 391
            +VL + +    A   F+   ++ G      +Y  ++G L           L   M   GC
Sbjct: 760  RVLCKHKRELYAYQIFDKFTKKLGISPTLASYNCLIGELLEVHYTEKAWDLFKDMKNVGC 819

Query: 392  QPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMD 451
             P+  T+N L+  +G++  + E  +++K+M    C+PD +TY  +I   AK+  LD A+D
Sbjct: 820  APDAFTFNMLLAVHGKSGKITELFELYKEMISRRCKPDAITYNIVISSLAKSNNLDKALD 879

Query: 452  MYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQA 511
             +  + ++   P   TY  +I+ L K G L+ A +LF EM + GC PN   +NI+I    
Sbjct: 880  FFYDLVSSDFRPTPRTYGPLIDGLAKVGRLEEAMRLFEEMSDYGCKPNCAIFNILINGYG 939

Query: 512  KARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEP 571
            K  + ++A +L++ M N G  PD  +Y+I+++ L   G +DEA   F E++     PD  
Sbjct: 940  KIGDTETACQLFKRMVNEGIRPDLKSYTILVDCLCLAGRVDEALYYFNELKSTGLDPDFI 999

Query: 572  VYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGM 631
             Y  +++  GK+  + +A   Y  M   G+ P++ T NSL+      G +  A  + + +
Sbjct: 1000 AYNRIINGLGKSQRMEEALALYNEMRNRGIVPDLYTYNSLMLNLGLAGMVEQAKRMYEEL 1059

Query: 632  LNLGLKPSLQTYTLLLSCCTEARSPYDMGFCHELMAVSG 670
               GL+P + TY  L+   + + +P      ++ M V G
Sbjct: 1060 QLAGLEPDVFTYNALIRGYSLSENPEHAYTVYKNMMVDG 1098



 Score =  153 bits (386), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 90/295 (30%), Positives = 147/295 (49%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           G K D+  Y T++             +   QM  DG  P+VVT+  L+    +A   +EA
Sbjct: 327 GHKPDQVIYITLLDKFNDFGDLDTFKEFWSQMEADGYMPDVVTFTILVDVLCKARDFDEA 386

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
              F  M+  G  P+  TY TLI    +AG ++ A+ +   M++ G+ P  +TY++ I+ 
Sbjct: 387 FATFDVMRKQGILPNLHTYNTLICGLLRAGRIEDALKLLGTMESVGVQPTAYTYNIFIDY 446

Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPD 534
            GK+G    A + F +M  +G +PN+V  N  +   A+    + A  ++  ++  G  PD
Sbjct: 447 FGKSGETGKAVETFEKMKAKGIVPNIVACNASLYSLAEMGRLREAKTMFNGLRENGLAPD 506

Query: 535 KVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYE 594
            VTY+++M+     G +DEA  + +EM R    PD  V   L+D   KAG V +AW+ ++
Sbjct: 507 SVTYNMMMKCYSKVGQVDEAVNLLSEMIRNGCEPDVIVVNSLIDSLYKAGRVDEAWQMFD 566

Query: 595 AMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSC 649
            M    L P V T N+LLS   + G++  A  L + M+     P+  ++  LL C
Sbjct: 567 RMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIELFESMIEKKCSPNTISFNTLLDC 621



 Score =  143 bits (361), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 92/329 (27%), Positives = 152/329 (46%), Gaps = 35/329 (10%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           G + + +T+T  + +LGRA +     ++  +M  +GC P++VTY  LI +   A  L  A
Sbjct: 257 GLRPNVYTFTICIRVLGRAGKIDEAYEIFRRMDDEGCGPDLVTYTVLIDALCNAGQLENA 316

Query: 415 -------------------------------LDVFK----QMQVVGCEPDRVTYCTLIDI 439
                                          LD FK    QM+  G  PD VT+  L+D+
Sbjct: 317 KELFVKMKANGHKPDQVIYITLLDKFNDFGDLDTFKEFWSQMEADGYMPDVVTFTILVDV 376

Query: 440 HAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPN 499
             KA   D A   +  M+  G+ P+  TY+ +I  L +AG ++ A +L   M + G  P 
Sbjct: 377 LCKARDFDEAFATFDVMRKQGILPNLHTYNTLICGLLRAGRIEDALKLLGTMESVGVQPT 436

Query: 500 LVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFA 559
             TYNI I    K+     A++ +  M+  G  P+ V  +  +  L   G L EA+ +F 
Sbjct: 437 AYTYNIFIDYFGKSGETGKAVETFEKMKAKGIVPNIVACNASLYSLAEMGRLREAKTMFN 496

Query: 560 EMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVG 619
            +R     PD   Y +++  + K G V +A      M++ G  P+V   NSL+ +  + G
Sbjct: 497 GLRENGLAPDSVTYNMMMKCYSKVGQVDEAVNLLSEMIRNGCEPDVIVVNSLIDSLYKAG 556

Query: 620 QLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
           ++ +A+ +   M ++ L P++ TY  LLS
Sbjct: 557 RVDEAWQMFDRMKDMKLSPTVVTYNTLLS 585



 Score =  119 bits (297), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 84/327 (25%), Positives = 150/327 (45%), Gaps = 37/327 (11%)

Query: 333 VLKQLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQ 392
           VL + +D   A   F+ +R+Q G   + HTY T++  L RA +     KLL  M   G Q
Sbjct: 376 VLCKARDFDEAFATFDVMRKQ-GILPNLHTYNTLICGLLRAGRIEDALKLLGTMESVGVQ 434

Query: 393 PNVVTYNRLIHSYGRANYLNEALDVFKQMQ-------VVGCE------------------ 427
           P   TYN  I  +G++    +A++ F++M+       +V C                   
Sbjct: 435 PTAYTYNIFIDYFGKSGETGKAVETFEKMKAKGIVPNIVACNASLYSLAEMGRLREAKTM 494

Query: 428 ----------PDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGK 477
                     PD VTY  ++  ++K G +D A+++  +M   G  PD    + +I+ L K
Sbjct: 495 FNGLRENGLAPDSVTYNMMMKCYSKVGQVDEAVNLLSEMIRNGCEPDVIVVNSLIDSLYK 554

Query: 478 AGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVT 537
           AG +  A Q+F  M +    P +VTYN +++   K    Q A++L+  M      P+ ++
Sbjct: 555 AGRVDEAWQMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIELFESMIEKKCSPNTIS 614

Query: 538 YSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAML 597
           ++ +++       ++ A  +F++M   +  PD   Y  ++    K   V  A+ W+   L
Sbjct: 615 FNTLLDCFCKNDEVELALKMFSKMTVMDCKPDVLTYNTVIYGLIKENKVNHAF-WFFHQL 673

Query: 598 QAGLRPNVPTCNSLLSAFLRVGQLSDA 624
           +  + P+  T  +LL   ++ GQ+ DA
Sbjct: 674 KKSMHPDHVTICTLLPGLVKCGQIGDA 700



 Score =  111 bits (278), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 87/336 (25%), Positives = 151/336 (44%), Gaps = 12/336 (3%)

Query: 417 VFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLG 476
           VF+ MQ      D  TY T+    +  G L     +  KM+ AG   + ++Y+ +I+ L 
Sbjct: 144 VFEFMQKKIIRRDLDTYLTIFKALSIRGGLRQMTTVLNKMRKAGFVLNAYSYNGLIHLLI 203

Query: 477 KAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKV 536
           ++G    A +++  MV++G  P+L TY+ ++    K R+ +  + L ++M++ G  P+  
Sbjct: 204 QSGFCGEALEVYRRMVSEGLKPSLKTYSALMVALGKKRDSEMVMVLLKEMEDLGLRPNVY 263

Query: 537 TYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAM 596
           T++I + VLG  G +DEA  +F  M  +   PD   Y +L+D    AG +  A E +  M
Sbjct: 264 TFTICIRVLGRAGKIDEAYEIFRRMDDEGCGPDLVTYTVLIDALCNAGQLENAKELFVKM 323

Query: 597 LQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSP 656
              G +P+     +LL  F   G L         M   G  P + T+T+L+    +AR  
Sbjct: 324 KANGHKPDQVIYITLLDKFNDFGDLDTFKEFWSQMEADGYMPDVVTFTILVDVLCKARD- 382

Query: 657 YDMGFC-HELMAVSG-----HPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRESKR 710
           +D  F   ++M   G     H  +  +  +   G     + D +   L  M S   +   
Sbjct: 383 FDEAFATFDVMRKQGILPNLHTYNTLICGLLRAG----RIEDAL-KLLGTMESVGVQPTA 437

Query: 711 GLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAV 746
              +  +D+  KSG   +A   +E    K + P+ V
Sbjct: 438 YTYNIFIDYFGKSGETGKAVETFEKMKAKGIVPNIV 473



 Score = 62.8 bits (151), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 39/131 (29%), Positives = 70/131 (53%), Gaps = 1/131 (0%)

Query: 343  ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLI 402
            AL +FN L+   G   D   Y  ++  LG++++      L ++M   G  P++ TYN L+
Sbjct: 982  ALYYFNELK-STGLDPDFIAYNRIINGLGKSQRMEEALALYNEMRNRGIVPDLYTYNSLM 1040

Query: 403  HSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLS 462
             + G A  + +A  +++++Q+ G EPD  TY  LI  ++ +   + A  +YK M   G +
Sbjct: 1041 LNLGLAGMVEQAKRMYEELQLAGLEPDVFTYNALIRGYSLSENPEHAYTVYKNMMVDGCN 1100

Query: 463  PDTFTYSVIIN 473
            P+  TY+ + N
Sbjct: 1101 PNIGTYAQLPN 1111



 Score = 55.8 bits (133), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 38/146 (26%), Positives = 69/146 (47%)

Query: 502 TYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEM 561
           T N M+         +    ++  MQ      D  TY  + + L   G L +   V  +M
Sbjct: 124 TCNFMLEFLRVHDKVEDMAAVFEFMQKKIIRRDLDTYLTIFKALSIRGGLRQMTTVLNKM 183

Query: 562 RRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQL 621
           R+  +V +   Y  L+ L  ++G   +A E Y  M+  GL+P++ T ++L+ A  +    
Sbjct: 184 RKAGFVLNAYSYNGLIHLLIQSGFCGEALEVYRRMVSEGLKPSLKTYSALMVALGKKRDS 243

Query: 622 SDAYHLLQGMLNLGLKPSLQTYTLLL 647
                LL+ M +LGL+P++ T+T+ +
Sbjct: 244 EMVMVLLKEMEDLGLRPNVYTFTICI 269


>gi|225432738|ref|XP_002279088.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22670,
           mitochondrial [Vitis vinifera]
          Length = 535

 Score =  172 bits (436), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 104/342 (30%), Positives = 182/342 (53%), Gaps = 5/342 (1%)

Query: 316 EALGNTNYSMDAYQANQVLKQL-QDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRAR 374
           +ALG    S+      QVLK+   D   A GFF W + Q G++H  ++Y +MV ILG+ +
Sbjct: 108 QALGGCGVSVSESLVEQVLKRFSNDWIPAFGFFKWAKAQTGYRHSMNSYNSMVDILGKLK 167

Query: 375 QFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYC 434
           +F  + +L+++M R G   ++ T  +++    RA+   +A++ F+ M+  G + D +   
Sbjct: 168 KFDLMWELVEEMDRLGGYVSLATMTKVMRRLARASRWKDAIEAFRGMERFGVKKDTLAMN 227

Query: 435 TLIDIHAKAGFLDVAMDMYKKMQ-AAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVN 493
           TL+D   K   ++ A D++ + + +  L+P TF  +V+I+   KA  +  A +   EM  
Sbjct: 228 TLMDALVKENSVEHANDVFVEFKDSILLNPHTF--NVLIHGWCKARKMDNALKSMAEMKE 285

Query: 494 QGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDE 553
            G  P++++Y  ++    + ++++    +  +M+  G  P+ VTY+IVM  LG    + +
Sbjct: 286 HGFCPDVISYTSIVEAYCREKDFRKVNSVLNEMEEKGCPPNVVTYTIVMHALGKGKEISK 345

Query: 554 AEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLS 613
           A  V+ +M+  + VPD   Y  L+ +  KAG ++ A + +E M + G  P+V T N+++S
Sbjct: 346 ALEVYEKMKGSSCVPDTSFYSSLIYILSKAGRLKDARDVFEDMTKQGAIPDVLTYNTMIS 405

Query: 614 AFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS-CCTEAR 654
           A     Q  DA  LL  M     KP L TY+ LL  CC   R
Sbjct: 406 AACMHSQEEDALKLLLKMEESSCKPDLNTYSPLLKMCCRNNR 447



 Score =  129 bits (325), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 82/316 (25%), Positives = 152/316 (48%), Gaps = 3/316 (0%)

Query: 291 FASTGNVVESVSRILRQWKWGPLAEEALGNTNYSM--DAYQANQVLKQL-QDHTVALGFF 347
           + S   + + + R+ R  +W    E   G   + +  D    N ++  L ++++V     
Sbjct: 185 YVSLATMTKVMRRLARASRWKDAIEAFRGMERFGVKKDTLAMNTLMDALVKENSVEHAND 244

Query: 348 NWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGR 407
            ++  +     + HT+  ++    +AR+     K + +M   G  P+V++Y  ++ +Y R
Sbjct: 245 VFVEFKDSILLNPHTFNVLIHGWCKARKMDNALKSMAEMKEHGFCPDVISYTSIVEAYCR 304

Query: 408 ANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFT 467
                +   V  +M+  GC P+ VTY  ++    K   +  A+++Y+KM+ +   PDT  
Sbjct: 305 EKDFRKVNSVLNEMEEKGCPPNVVTYTIVMHALGKGKEISKALEVYEKMKGSSCVPDTSF 364

Query: 468 YSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQ 527
           YS +I  L KAG L+ A  +F +M  QG IP+++TYN MI+        + ALKL   M+
Sbjct: 365 YSSLIYILSKAGRLKDARDVFEDMTKQGAIPDVLTYNTMISAACMHSQEEDALKLLLKME 424

Query: 528 NAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVR 587
            +  +PD  TYS ++++      +    A+   M + +   +   Y LLV    K+G + 
Sbjct: 425 ESSCKPDLNTYSPLLKMCCRNNRMKVLSALLNHMFKNDISLEVGTYSLLVHGLCKSGKLE 484

Query: 588 KAWEWYEAMLQAGLRP 603
            A  ++E M+  GL P
Sbjct: 485 HACLFFEEMVSKGLVP 500


>gi|297733951|emb|CBI15198.3| unnamed protein product [Vitis vinifera]
          Length = 948

 Score =  172 bits (436), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 117/410 (28%), Positives = 201/410 (49%), Gaps = 10/410 (2%)

Query: 313 LAEEALGNTNYSMDAYQANQVLKQLQDHTVALGFFNWLRR------QAGFKHDEHTYTTM 366
           L EEAL    Y MD   A Q    + D  V  G F+ + +        G   +  TY T+
Sbjct: 141 LVEEALW-VYYKMDVLPAMQACNMVLDGLVKKGRFDTMWKVYGDMVARGASPNVVTYGTL 199

Query: 367 VGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGC 426
           +    R   F    +L D+M+     P VV Y  LI      + ++EA  +F+ M+  G 
Sbjct: 200 IDGCCRQGDFLKAFRLFDEMIEKKIFPTVVIYTILIRGLCGESRISEAESMFRTMRNSGM 259

Query: 427 EPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQ 486
            P+  TY T++D + K   +  A+++Y++M   GL P+  T+ ++I+ L K   + +A +
Sbjct: 260 LPNLYTYNTMMDGYCKIAHVKKALELYQEMLGDGLLPNVVTFGILIDGLCKTDEMVSARK 319

Query: 487 LFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLG 546
              +M + G +PN+  YN +I    KA N   AL L+ +++     PD  TYSI+++ L 
Sbjct: 320 FLIDMASFGVVPNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLC 379

Query: 547 HCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVP 606
               ++EA+ +  EM++K ++P+   Y  L+D + K GN+ KA E    M + G+ PN+ 
Sbjct: 380 GVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNII 439

Query: 607 TCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGFCHELM 666
           T ++L+  + + G++  A  L   M+  GL P +  YT L+    +  +  +    H+ M
Sbjct: 440 TFSTLIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEM 499

Query: 667 AVSGHPAHMFLLSMPSPG--PDGQNVRDHVGSFLEMMHSEDRESKRGLVD 714
             +G   ++F LS    G   DG+ + D +  FL    ++   SK   +D
Sbjct: 500 QEAGLHPNVFTLSCLIDGLCKDGR-ISDAIKLFLAKTGTDTTGSKTNELD 548



 Score =  114 bits (285), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 85/335 (25%), Positives = 147/335 (43%), Gaps = 4/335 (1%)

Query: 332 QVLKQLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGC 391
           Q L+  +   +    FN L R    K   + +  ++       + G + + L    +   
Sbjct: 98  QCLQNSRRSRICCSVFNVLSRLESSKFTPNVFGVLIIAFS---EMGLVEEALWVYYKMDV 154

Query: 392 QPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMD 451
            P +   N ++    +    +    V+  M   G  P+ VTY TLID   + G    A  
Sbjct: 155 LPAMQACNMVLDGLVKKGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFR 214

Query: 452 MYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQA 511
           ++ +M    + P    Y+++I  L     +  A  +F  M N G +PNL TYN M+    
Sbjct: 215 LFDEMIEKKIFPTVVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYC 274

Query: 512 KARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEP 571
           K  + + AL+LY++M   G  P+ VT+ I+++ L     +  A     +M     VP+  
Sbjct: 275 KIAHVKKALELYQEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIF 334

Query: 572 VYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGM 631
           VY  L+D + KAGN+ +A   +  + +  + P+V T + L+     V ++ +A  LLQ M
Sbjct: 335 VYNCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEM 394

Query: 632 LNLGLKPSLQTY-TLLLSCCTEARSPYDMGFCHEL 665
              G  P+  TY TL+   C E      +  C ++
Sbjct: 395 KKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQM 429



 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 47/222 (21%), Positives = 94/222 (42%), Gaps = 37/222 (16%)

Query: 460 GLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSA 519
           G  P  F  + +I+     G++  AH +F E+ ++    NL+++  +I+     +    A
Sbjct: 661 GFEPIIFLQTSLISMYSATGNVADAHNMFDEIPSK----NLISWTSVISAYVDNQRPNKA 716

Query: 520 LKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDL 579
           L+L+R MQ    +PD VT ++ +      G LD  E + A +R +    D  +   L+++
Sbjct: 717 LQLFRQMQMDDVQPDIVTVTVALSACADLGALDMGEWIHAYIRHRGLDTDLCLNNSLINM 776

Query: 580 WGKAGNVRKAWEW------------------YEAMLQAG------------LRPNVPTCN 609
           + K G +  A  +                  +  +++ G            LRP +    
Sbjct: 777 YSKCGEIGTARRFSLVLPNDVTFMGVLMACSHAGLVEEGKQHFRSMKEDYSLRPRISHFG 836

Query: 610 SLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCT 651
            ++    R G L++AY  +   L + ++P+   +  LL  C+
Sbjct: 837 CMVDLLCRAGLLTEAYEFI---LKMPVRPNAVVWRTLLGACS 875



 Score = 59.7 bits (143), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 53/222 (23%), Positives = 93/222 (41%), Gaps = 45/222 (20%)

Query: 394 NVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMY 453
           N++++  +I +Y      N+AL +F+QMQ+   +PD VT    +   A  G LD+   ++
Sbjct: 696 NLISWTSVISAYVDNQRPNKALQLFRQMQMDDVQPDIVTVTVALSACADLGALDMGEWIH 755

Query: 454 KKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKA 513
             ++  GL  D    + +IN   K G +                               A
Sbjct: 756 AYIRHRGLDTDLCLNNSLINMYSKCGEI-----------------------------GTA 786

Query: 514 RNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRK-NWVPDEPV 572
           R +   L            P+ VT+  V+    H G ++E +  F  M+   +  P    
Sbjct: 787 RRFSLVL------------PNDVTFMGVLMACSHAGLVEEGKQHFRSMKEDYSLRPRISH 834

Query: 573 YGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSA 614
           +G +VDL  +AG + +A+E+   +L+  +RPN     +LL A
Sbjct: 835 FGCMVDLLCRAGLLTEAYEF---ILKMPVRPNAVVWRTLLGA 873


>gi|242066030|ref|XP_002454304.1| hypothetical protein SORBIDRAFT_04g028250 [Sorghum bicolor]
 gi|241934135|gb|EES07280.1| hypothetical protein SORBIDRAFT_04g028250 [Sorghum bicolor]
          Length = 638

 Score =  172 bits (435), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 114/396 (28%), Positives = 191/396 (48%), Gaps = 17/396 (4%)

Query: 271 FSKPSREMKIPAGLAPFSRHFASTGNVV-ESVSRILRQWKWGPLAEEALGNTNYSMDAYQ 329
           F  P R+ +    +A     +A +  V+ E   RIL+ +KWGP AE+AL      +D + 
Sbjct: 35  FHPPVRQSE--EAIATIVPRYAHSVRVLDERFIRILKIFKWGPDAEKALEVLMLRVDHWL 92

Query: 330 ANQVLKQLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRD 389
             +V+K      V + FF W  ++  ++HD  TY  ++  L    Q+G + K++ +MVR+
Sbjct: 93  VREVMKTDIGVNVKMQFFRWAAKRRNYEHDTSTYMALIRCLEVVEQYGEMWKMIQEMVRN 152

Query: 390 G-CQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDV 448
             C       + ++   G A  +++A+ +F Q++   C+P    Y ++I +    G    
Sbjct: 153 PICVVTPTELSEVVRMLGNAKMVSKAIAIFYQIKTRKCQPTAQAYNSMIIMLMHEGQYGK 212

Query: 449 AMDMYKKMQAAG-LSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMI 507
             ++Y +M   G   PDT TYS +I+   K G   +A QL  EM   G  P    Y ++I
Sbjct: 213 VHELYNEMSTEGHCFPDTMTYSALISAFCKLGRRDSATQLLNEMKENGMQPTTKIYTMLI 272

Query: 508 ALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWV 567
            L  K  +   AL L+ +M++    PD  TY+ ++  LG  G +DEA   F EM+R+   
Sbjct: 273 TLFFKLDDVHGALSLFEEMRHQYCRPDVFTYTELIRGLGKAGRIDEAYHFFYEMQREGCR 332

Query: 568 PDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSA-FLRVGQLSDAYH 626
           PD  V   +++  GKAG +  A + ++ M      P+V T N+++ A F    + S+   
Sbjct: 333 PDTVVMNNMINFLGKAGRLDDAMKLFQEMGTLRCIPSVVTYNTIIKALFESKSRASEVPS 392

Query: 627 LLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGFC 662
             + M   G+ PS  TY++L+            GFC
Sbjct: 393 WFERMKESGISPSSFTYSILID-----------GFC 417



 Score =  145 bits (365), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 94/335 (28%), Positives = 154/335 (45%), Gaps = 36/335 (10%)

Query: 359 DEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVF 418
           D  TY+ ++    +  +  +  +LL++M  +G QP    Y  LI  + + + ++ AL +F
Sbjct: 229 DTMTYSALISAFCKLGRRDSATQLLNEMKENGMQPTTKIYTMLITLFFKLDDVHGALSLF 288

Query: 419 KQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKA 478
           ++M+   C PD  TY  LI    KAG +D A   + +MQ  G  PDT   + +IN LGKA
Sbjct: 289 EEMRHQYCRPDVFTYTELIRGLGKAGRIDEAYHFFYEMQREGCRPDTVVMNNMINFLGKA 348

Query: 479 GHLQAAHQLFCEMVNQGCIPNLVTYNIMIA--LQAKAR---------------------- 514
           G L  A +LF EM    CIP++VTYN +I    ++K+R                      
Sbjct: 349 GRLDDAMKLFQEMGTLRCIPSVVTYNTIIKALFESKSRASEVPSWFERMKESGISPSSFT 408

Query: 515 ------------NYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMR 562
                         + A+ L  +M   GF P    Y  +++ LG     D A  +F E++
Sbjct: 409 YSILIDGFCKTNRMEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLACELFQELK 468

Query: 563 RKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLS 622
                    VY +++   GKAG +  A   ++ M + G  P+V   N+L+S   R G L 
Sbjct: 469 ENCGSSSARVYAVMIKHLGKAGRLDDAINMFDEMNKLGCAPDVYAYNALMSGLARTGMLD 528

Query: 623 DAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPY 657
           +A   ++ M   G  P + +Y ++L+   +   P+
Sbjct: 529 EALSTMRRMQEHGCIPDINSYNIILNGLAKTGGPH 563



 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 99/359 (27%), Positives = 165/359 (45%), Gaps = 39/359 (10%)

Query: 336 QLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNV 395
           +L D   AL  F  +R Q   + D  TYT ++  LG+A +         +M R+GC+P+ 
Sbjct: 277 KLDDVHGALSLFEEMRHQYC-RPDVFTYTELIRGLGKAGRIDEAYHFFYEMQREGCRPDT 335

Query: 396 VTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLID--IHAKAGFLDVAMDMY 453
           V  N +I+  G+A  L++A+ +F++M  + C P  VTY T+I     +K+   +V    +
Sbjct: 336 VVMNNMINFLGKAGRLDDAMKLFQEMGTLRCIPSVVTYNTIIKALFESKSRASEVP-SWF 394

Query: 454 KKMQAAGLSPDTFTYSVIIN-----------------------------------CLGKA 478
           ++M+ +G+SP +FTYS++I+                                    LGKA
Sbjct: 395 ERMKESGISPSSFTYSILIDGFCKTNRMEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKA 454

Query: 479 GHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTY 538
                A +LF E+       +   Y +MI    KA     A+ ++ +M   G  PD   Y
Sbjct: 455 KRYDLACELFQELKENCGSSSARVYAVMIKHLGKAGRLDDAINMFDEMNKLGCAPDVYAY 514

Query: 539 SIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQ 598
           + +M  L   G LDEA +    M+    +PD   Y ++++   K G   +A E    M Q
Sbjct: 515 NALMSGLARTGMLDEALSTMRRMQEHGCIPDINSYNIILNGLAKTGGPHRAMEMLSNMKQ 574

Query: 599 AGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPY 657
           + +RP+V + N++L A    G   +A  L++ M  LG +  L TY+ +L    +    Y
Sbjct: 575 STVRPDVVSYNTVLGALSHAGMFEEAAKLMEEMNTLGFEYDLITYSSILEAIGKVDHEY 633


>gi|359495626|ref|XP_002269600.2| PREDICTED: pentatricopeptide repeat-containing protein At4g16390,
           chloroplastic [Vitis vinifera]
          Length = 701

 Score =  172 bits (435), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 143/598 (23%), Positives = 259/598 (43%), Gaps = 52/598 (8%)

Query: 282 AGLAPFSRHFASTGNVVESVSRILRQWKWGPLAEEALGNTNYSMDAYQANQVLKQLQDHT 341
           A L   +    S     E VS++LR           LG+     DA     VL  + +  
Sbjct: 111 ASLVKIAESLDSCEATEEDVSQVLR----------CLGDKILEQDAVI---VLNNMTNPE 157

Query: 342 VALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRL 401
            AL  F + R++     +   Y   + +  + R      KL D+M+  G +P+ +T++ +
Sbjct: 158 TALLAFGFFRKRLKPSREVILYNVTLKVFRKCRNLDRAEKLFDEMLERGVKPDNITFSTI 217

Query: 402 IHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGL 461
           I     ++  N+A++ F++M   GC PD VTY  +ID + +AG +D+A+ +Y + +    
Sbjct: 218 ISCARVSSLPNKAVEWFEKMPEFGCHPDDVTYSAMIDAYGRAGNVDMALKLYDRARTEKW 277

Query: 462 SPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALK 521
             D  T+S +I   G +G+      ++ EM   G  PNLV YN ++    +A+    A  
Sbjct: 278 RIDPVTFSTLIRIYGMSGNFDGCLNVYEEMKALGVKPNLVIYNTLLDAMGRAKRPWQAKN 337

Query: 522 LYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWG 581
           +Y++M N G +P   TY+ ++   G   Y ++A  V+ EM+ K       +Y  L+ +  
Sbjct: 338 IYKEMTNNGLQPSWGTYAALLRAYGRARYAEDALIVYKEMKEKGLELSVVLYNTLLAMCA 397

Query: 582 KAGNVRKAWEWYEAMLQAG-LRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSL 640
             G   +A   +E M  +G   P+  T +SL++ +   G++S+A  +L  ML  G +P++
Sbjct: 398 DVGYTEEAAAIFEDMKSSGNCMPDSWTFSSLITIYSCSGKVSEAEAMLNAMLEAGFEPNI 457

Query: 641 QTYTLLLSCCTEA-RSPYDMGFCHELMAVSGHPAHMFLLSM-----PSPGPDGQNVRDHV 694
              T L+ C  +A R+   +     L+ +   P   F   M      SP  +   + D +
Sbjct: 458 FVLTSLIQCYGKANRTDEVVRTFDRLLELDITPDDRFCGCMLNVMTQSPKEELGKLIDCI 517

Query: 695 ---------------------GSFL----EMMHSEDRESKRGLVDAVVDFLHKSGLKEEA 729
                                G+F     E+  S   + K+   + ++D      L E+A
Sbjct: 518 DKANPKLGNVVKLLLEEQNGEGTFRKEASELFDSISADVKKAYCNCLIDLCVNLNLLEKA 577

Query: 730 GSVWEVAAQKNVYPDAVKEKGMSYWLINLHVMSDGTAVIALSRTLAWFRKQMLISGVGPS 789
             ++++     +Y D ++ K  + W ++L  +S G A+ AL   +    K + +    P+
Sbjct: 578 CELFDLGLTLEIYID-IQSKSPTQWSLHLKSLSLGAALTALHIWMNDLSKAVEVGEELPA 636

Query: 790 RIDIVTGWGRR--SRVTGTSLVRQAVQELLHMFSFPFFTENGNSGCFVGCGEPLNKWL 845
            + I TG G+   S     S+    ++EL    + PF       G F+        WL
Sbjct: 637 VLGINTGHGKHKYSDKGLASVFESHLKEL----NAPFHEAPDKVGWFLTTKVAATSWL 690


>gi|299471526|emb|CBN80012.1| conserved unknown protein [Ectocarpus siliculosus]
          Length = 732

 Score =  172 bits (435), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 116/419 (27%), Positives = 197/419 (47%), Gaps = 15/419 (3%)

Query: 335 KQLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPN 394
           KQ  D   AL   + ++ Q G K D   Y++ +   G ARQ+    +LL  M   G  P+
Sbjct: 162 KQYGDWRKALDVLDRMQEQ-GVKPDSQNYSSAIAACGNARQWERAVELLASMAARGTPPD 220

Query: 395 VVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYK 454
           V+TY+  I +  + +   EA+ + + M+  G +P+ + Y   I    K G  + A+D+ K
Sbjct: 221 VLTYSSAIAACAKVSRWKEAVGLLRSMKGQGVKPNVIVYSAAISACRKGGQWETAVDLLK 280

Query: 455 KMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKAR 514
           +M A GL+PD  TYS +I+   K G  + A +L  EM  +G + N++TY+I+I   AK  
Sbjct: 281 EMPAVGLAPDVITYSTVIDACAKRGQWEPAFRLLMEMPTKGVVANIITYSIVIGACAKWG 340

Query: 515 NYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYG 574
            ++ A+ L R+MQ  G  PD +TYS  +      G  +EA  +  EM  +   P+   YG
Sbjct: 341 QWEEAVALLREMQENGVAPDVITYSSTISACAKKGQWEEAVGLLREMPMEGVTPNAISYG 400

Query: 575 LLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNL 634
           +++    K G  R+A +  + M   G+ P+V   ++ + A  +  +   A  LL+ M   
Sbjct: 401 IVISACAKRGRWREAIDLLQEMQAHGVPPDVINYSAAIDACAQASRWEQALWLLREMPAT 460

Query: 635 GLKPSLQTYTLLLSCCTE-ARSPYDMGFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDH 693
           GL P++ +Y   +  C +  RS   +    E+ A    P  +   ++ +    G+   + 
Sbjct: 461 GLTPNVISYNSAIDACAKTGRSKIAVELLREMPAHGLAPDVITYSAVIASCAMGRQWEEA 520

Query: 694 VGSFLEMMHSEDRESKRGLVDAVV------DFLHKSGLKEEAGSVWEVAAQKNVYPDAV 746
           +  F EM        ++G+   VV      +   + G  EEA  V        + PDA+
Sbjct: 521 LDLFREM-------QRQGITPDVVSCNTAINACAQGGWWEEALDVLGEMPTMGLVPDAI 572



 Score =  153 bits (386), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 88/301 (29%), Positives = 148/301 (49%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           ++ G   D  TY++ +    +  Q+     LL +M  +G  PN ++Y  +I +  +    
Sbjct: 353 QENGVAPDVITYSSTISACAKKGQWEEAVGLLREMPMEGVTPNAISYGIVISACAKRGRW 412

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
            EA+D+ ++MQ  G  PD + Y   ID  A+A   + A+ + ++M A GL+P+  +Y+  
Sbjct: 413 REAIDLLQEMQAHGVPPDVINYSAAIDACAQASRWEQALWLLREMPATGLTPNVISYNSA 472

Query: 472 INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF 531
           I+   K G  + A +L  EM   G  P+++TY+ +IA  A  R ++ AL L+R+MQ  G 
Sbjct: 473 IDACAKTGRSKIAVELLREMPAHGLAPDVITYSAVIASCAMGRQWEEALDLFREMQRQGI 532

Query: 532 EPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWE 591
            PD V+ +  +      G+ +EA  V  EM     VPD   Y   +D   K    ++  +
Sbjct: 533 TPDVVSCNTAINACAQGGWWEEALDVLGEMPTMGLVPDAISYRTAIDACAKGDRWKEIID 592

Query: 592 WYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCT 651
               M   GL P+  +    +SA    G   +A  LL+ ML +GL P + TY   ++ C 
Sbjct: 593 LLREMSTVGLTPDAISYRFAMSACSVDGLWKEALVLLRDMLAVGLSPDVVTYNSAINACA 652

Query: 652 E 652
           +
Sbjct: 653 K 653



 Score =  137 bits (344), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 82/290 (28%), Positives = 141/290 (48%)

Query: 362 TYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQM 421
           TY+ ++G   +  Q+     LL +M  +G  P+V+TY+  I +  +     EA+ + ++M
Sbjct: 328 TYSIVIGACAKWGQWEEAVALLREMQENGVAPDVITYSSTISACAKKGQWEEAVGLLREM 387

Query: 422 QVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHL 481
            + G  P+ ++Y  +I   AK G    A+D+ ++MQA G+ PD   YS  I+   +A   
Sbjct: 388 PMEGVTPNAISYGIVISACAKRGRWREAIDLLQEMQAHGVPPDVINYSAAIDACAQASRW 447

Query: 482 QAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIV 541
           + A  L  EM   G  PN+++YN  I   AK    + A++L R+M   G  PD +TYS V
Sbjct: 448 EQALWLLREMPATGLTPNVISYNSAIDACAKTGRSKIAVELLREMPAHGLAPDVITYSAV 507

Query: 542 MEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGL 601
           +         +EA  +F EM+R+   PD       ++   + G   +A +    M   GL
Sbjct: 508 IASCAMGRQWEEALDLFREMQRQGITPDVVSCNTAINACAQGGWWEEALDVLGEMPTMGL 567

Query: 602 RPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCT 651
            P+  +  + + A  +  +  +   LL+ M  +GL P   +Y   +S C+
Sbjct: 568 VPDAISYRTAIDACAKGDRWKEIIDLLREMSTVGLTPDAISYRFAMSACS 617



 Score =  135 bits (339), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 77/298 (25%), Positives = 143/298 (47%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           G   D  TY+T++    +  Q+    +LL +M   G   N++TY+ +I +  +     EA
Sbjct: 286 GLAPDVITYSTVIDACAKRGQWEPAFRLLMEMPTKGVVANIITYSIVIGACAKWGQWEEA 345

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
           + + ++MQ  G  PD +TY + I   AK G  + A+ + ++M   G++P+  +Y ++I+ 
Sbjct: 346 VALLREMQENGVAPDVITYSSTISACAKKGQWEEAVGLLREMPMEGVTPNAISYGIVISA 405

Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPD 534
             K G  + A  L  EM   G  P+++ Y+  I   A+A  ++ AL L R+M   G  P+
Sbjct: 406 CAKRGRWREAIDLLQEMQAHGVPPDVINYSAAIDACAQASRWEQALWLLREMPATGLTPN 465

Query: 535 KVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYE 594
            ++Y+  ++     G    A  +  EM      PD   Y  ++          +A + + 
Sbjct: 466 VISYNSAIDACAKTGRSKIAVELLREMPAHGLAPDVITYSAVIASCAMGRQWEEALDLFR 525

Query: 595 AMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTE 652
            M + G+ P+V +CN+ ++A  + G   +A  +L  M  +GL P   +Y   +  C +
Sbjct: 526 EMQRQGITPDVVSCNTAINACAQGGWWEEALDVLGEMPTMGLVPDAISYRTAIDACAK 583



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 87/305 (28%), Positives = 137/305 (44%), Gaps = 8/305 (2%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINK---LLDQMVRDGCQPNVVTYNRLIHSYGRA 408
           RQAG        T     L  A+Q+G   K   +LD+M   G +P+   Y+  I + G A
Sbjct: 145 RQAGMPMSHLKAT-----LREAKQYGDWRKALDVLDRMQEQGVKPDSQNYSSAIAACGNA 199

Query: 409 NYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTY 468
                A+++   M   G  PD +TY + I   AK      A+ + + M+  G+ P+   Y
Sbjct: 200 RQWERAVELLASMAARGTPPDVLTYSSAIAACAKVSRWKEAVGLLRSMKGQGVKPNVIVY 259

Query: 469 SVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQN 528
           S  I+   K G  + A  L  EM   G  P+++TY+ +I   AK   ++ A +L  +M  
Sbjct: 260 SAAISACRKGGQWETAVDLLKEMPAVGLAPDVITYSTVIDACAKRGQWEPAFRLLMEMPT 319

Query: 529 AGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRK 588
            G   + +TYSIV+      G  +EA A+  EM+     PD   Y   +    K G   +
Sbjct: 320 KGVVANIITYSIVIGACAKWGQWEEAVALLREMQENGVAPDVITYSSTISACAKKGQWEE 379

Query: 589 AWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
           A      M   G+ PN  +   ++SA  + G+  +A  LLQ M   G+ P +  Y+  + 
Sbjct: 380 AVGLLREMPMEGVTPNAISYGIVISACAKRGRWREAIDLLQEMQAHGVPPDVINYSAAID 439

Query: 649 CCTEA 653
            C +A
Sbjct: 440 ACAQA 444



 Score =  129 bits (324), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 81/279 (29%), Positives = 133/279 (47%), Gaps = 1/279 (0%)

Query: 372 RARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRV 431
           R R   AI+ LL +M   G  P+V+ Y+  I +  +A+   +AL + ++M   G  P+ +
Sbjct: 409 RGRWREAID-LLQEMQAHGVPPDVINYSAAIDACAQASRWEQALWLLREMPATGLTPNVI 467

Query: 432 TYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEM 491
           +Y + ID  AK G   +A+++ ++M A GL+PD  TYS +I         + A  LF EM
Sbjct: 468 SYNSAIDACAKTGRSKIAVELLREMPAHGLAPDVITYSAVIASCAMGRQWEEALDLFREM 527

Query: 492 VNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYL 551
             QG  P++V+ N  I   A+   ++ AL +  +M   G  PD ++Y   ++        
Sbjct: 528 QRQGITPDVVSCNTAINACAQGGWWEEALDVLGEMPTMGLVPDAISYRTAIDACAKGDRW 587

Query: 552 DEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSL 611
            E   +  EM      PD   Y   +      G  ++A      ML  GL P+V T NS 
Sbjct: 588 KEIIDLLREMSTVGLTPDAISYRFAMSACSVDGLWKEALVLLRDMLAVGLSPDVVTYNSA 647

Query: 612 LSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCC 650
           ++A  + G+  +A  LL+ M   GL P + ++   +  C
Sbjct: 648 INACAKGGRWKEATVLLRQMPTFGLAPDVNSFNAAIDAC 686



 Score =  125 bits (315), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 81/322 (25%), Positives = 140/322 (43%), Gaps = 14/322 (4%)

Query: 329 QANQVLKQLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVR 388
           +A  +L+++Q H V     N              Y+  +    +A ++     LL +M  
Sbjct: 414 EAIDLLQEMQAHGVPPDVIN--------------YSAAIDACAQASRWEQALWLLREMPA 459

Query: 389 DGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDV 448
            G  PNV++YN  I +  +      A+++ ++M   G  PD +TY  +I   A     + 
Sbjct: 460 TGLTPNVISYNSAIDACAKTGRSKIAVELLREMPAHGLAPDVITYSAVIASCAMGRQWEE 519

Query: 449 AMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIA 508
           A+D++++MQ  G++PD  + +  IN   + G  + A  +  EM   G +P+ ++Y   I 
Sbjct: 520 ALDLFREMQRQGITPDVVSCNTAINACAQGGWWEEALDVLGEMPTMGLVPDAISYRTAID 579

Query: 509 LQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVP 568
             AK   ++  + L R+M   G  PD ++Y   M      G   EA  +  +M      P
Sbjct: 580 ACAKGDRWKEIIDLLREMSTVGLTPDAISYRFAMSACSVDGLWKEALVLLRDMLAVGLSP 639

Query: 569 DEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLL 628
           D   Y   ++   K G  ++A      M   GL P+V + N+ + A     Q   A  +L
Sbjct: 640 DVVTYNSAINACAKGGRWKEATVLLRQMPTFGLAPDVNSFNAAIDACGNGDQWGTAVEVL 699

Query: 629 QGMLNLGLKPSLQTYTLLLSCC 650
             M  LG+ P+  TY   +  C
Sbjct: 700 FEMRALGVSPNEATYLTAMYAC 721


>gi|359491317|ref|XP_003634263.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g61400-like [Vitis vinifera]
          Length = 665

 Score =  172 bits (435), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 119/412 (28%), Positives = 203/412 (49%), Gaps = 14/412 (3%)

Query: 313 LAEEALGNTNYSMDAYQANQVLKQLQDHTVALGFFNWLRR------QAGFKHDEHTYTTM 366
           L EEAL    Y MD   A Q    + D  V  G F+ + +        G   +  TY T+
Sbjct: 141 LVEEALW-VYYKMDVLPAMQACNMVLDGLVKKGRFDTMWKVYGDMVARGASPNVVTYGTL 199

Query: 367 VGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGC 426
           +    R   F    +L D+M+     P VV Y  LI      + ++EA  +F+ M+  G 
Sbjct: 200 IDGCCRQGDFLKAFRLFDEMIEKKIFPTVVIYTILIRGLCGESRISEAESMFRTMRNSGM 259

Query: 427 EPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQ 486
            P+  TY T++D + K   +  A+++Y++M   GL P+  T+ ++I+ L K   + +A +
Sbjct: 260 LPNLYTYNTMMDGYCKIAHVKKALELYQEMLGDGLLPNVVTFGILIDGLCKTDEMVSARK 319

Query: 487 LFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLG 546
              +M + G +PN+  YN +I    KA N   AL L+ +++     PD  TYSI+++  G
Sbjct: 320 FLIDMASFGVVPNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIK--G 377

Query: 547 HCGY--LDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPN 604
            CG   ++EA+ +  EM++K ++P+   Y  L+D + K GN+ KA E    M + G+ PN
Sbjct: 378 LCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPN 437

Query: 605 VPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGFCHE 664
           + T ++L+  + + G++  A  L   M+  GL P +  YT L+    +  +  +    H+
Sbjct: 438 IITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHK 497

Query: 665 LMAVSGHPAHMFLLSMPSPG--PDGQNVRDHVGSFLEMMHSEDRESKRGLVD 714
            M  +G   ++F LS    G   DG+ + D +  FL    ++   SK   +D
Sbjct: 498 EMQEAGLHPNVFTLSCLIDGLCKDGR-ISDAIKLFLAKTGTDTTGSKTNELD 548



 Score =  140 bits (352), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 110/397 (27%), Positives = 178/397 (44%), Gaps = 61/397 (15%)

Query: 299 ESVSRILRQWKWGPLAEEALGNTNYSMDAY-QANQVLKQLQDHTVALGFFNWLRRQAGFK 357
           ES+ R +R     P     L   N  MD Y +   V K L+ +   LG         G  
Sbjct: 248 ESMFRTMRNSGMLP----NLYTYNTMMDGYCKIAHVKKALELYQEMLG--------DGLL 295

Query: 358 HDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEAL-- 415
            +  T+  ++  L +  +  +  K L  M   G  PN+  YN LI  Y +A  L+EAL  
Sbjct: 296 PNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSEALSL 355

Query: 416 -----------DVF----------------------KQMQVVGCEPDRVTYCTLIDIHAK 442
                      DVF                      ++M+  G  P+ VTY TLID + K
Sbjct: 356 HSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCK 415

Query: 443 AGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVT 502
            G ++ A+++  +M   G+ P+  T+S +I+   KAG ++AA  L+ EMV +G +P++V 
Sbjct: 416 EGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVA 475

Query: 503 YNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFA--- 559
           Y  +I    K  N + A +L+++MQ AG  P+  T S +++ L   G + +A  +F    
Sbjct: 476 YTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCKDGRISDAIKLFLAKT 535

Query: 560 ----------EMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCN 609
                     E+ R    P+  +Y  L+      G + KA +++  M  +GLRP+V TC 
Sbjct: 536 GTDTTGSKTNELDRSLCSPNHVMYTALIQGLCTDGRIFKASKFFSDMRCSGLRPDVFTCI 595

Query: 610 SLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLL 646
            ++    R   L D   L   +L +G+ P+   Y +L
Sbjct: 596 VIIQGHFRAMHLRDVMMLQADILKMGIIPNSSVYRVL 632



 Score =  115 bits (289), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 86/297 (28%), Positives = 143/297 (48%), Gaps = 19/297 (6%)

Query: 359 DEHTYTTMV-GILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDV 417
           D  TY+ ++ G+ G  R   A + LL +M + G  PN VTYN LI  Y +   + +A++V
Sbjct: 367 DVFTYSILIKGLCGVDRMEEA-DGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEV 425

Query: 418 FKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGK 477
             QM   G EP+ +T+ TLID + KAG ++ AM +Y +M   GL PD   Y+ +I+   K
Sbjct: 426 CSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFK 485

Query: 478 AGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLY-------------R 524
            G+ + A +L  EM   G  PN+ T + +I    K      A+KL+              
Sbjct: 486 DGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCKDGRISDAIKLFLAKTGTDTTGSKTN 545

Query: 525 DMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWG--K 582
           ++  +   P+ V Y+ +++ L   G + +A   F++MR     PD  V+  +V + G  +
Sbjct: 546 ELDRSLCSPNHVMYTALIQGLCTDGRIFKASKFFSDMRCSGLRPD--VFTCIVIIQGHFR 603

Query: 583 AGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPS 639
           A ++R        +L+ G+ PN      L   +   G L  A    + +  +G+  S
Sbjct: 604 AMHLRDVMMLQADILKMGIIPNSSVYRVLAKGYEESGYLKSALRCSEDLSGIGIGCS 660



 Score =  113 bits (283), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 98/421 (23%), Positives = 178/421 (42%), Gaps = 17/421 (4%)

Query: 332 QVLKQLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGC 391
           Q L+  +   +    FN L R    K   + +  ++       + G + + L    +   
Sbjct: 98  QCLQNSRRSRICCSVFNVLSRLESSKFTPNVFGVLIIAFS---EMGLVEEALWVYYKMDV 154

Query: 392 QPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMD 451
            P +   N ++    +    +    V+  M   G  P+ VTY TLID   + G    A  
Sbjct: 155 LPAMQACNMVLDGLVKKGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFR 214

Query: 452 MYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQA 511
           ++ +M    + P    Y+++I  L     +  A  +F  M N G +PNL TYN M+    
Sbjct: 215 LFDEMIEKKIFPTVVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYC 274

Query: 512 KARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEP 571
           K  + + AL+LY++M   G  P+ VT+ I+++ L     +  A     +M     VP+  
Sbjct: 275 KIAHVKKALELYQEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIF 334

Query: 572 VYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGM 631
           VY  L+D + KAGN+ +A   +  + +  + P+V T + L+     V ++ +A  LLQ M
Sbjct: 335 VYNCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEM 394

Query: 632 LNLGLKPSLQTY-TLLLSCCTEARSPYDMGFCHELMAVSGHPAHMFLLSMPSPGPDGQNV 690
              G  P+  TY TL+   C E      +  C ++      P  +   ++         +
Sbjct: 395 KKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKM 454

Query: 691 RDHVGSFLEMMHSEDRESKRGLV------DAVVDFLHKSGLKEEAGSVWEVAAQKNVYPD 744
              +G + EM+        +GL+       A++D   K G  +EA  + +   +  ++P+
Sbjct: 455 EAAMGLYTEMV-------IKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPN 507

Query: 745 A 745
            
Sbjct: 508 V 508



 Score =  112 bits (281), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 72/264 (27%), Positives = 129/264 (48%), Gaps = 15/264 (5%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           ++ GF  +  TY T++    +        ++  QM   G +PN++T++ LI  Y +A  +
Sbjct: 395 KKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKM 454

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
             A+ ++ +M + G  PD V Y  LID H K G    A  ++K+MQ AGL P+ FT S +
Sbjct: 455 EAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCL 514

Query: 472 INCLGKAGHLQAAHQLFC-------------EMVNQGCIPNLVTYNIMI-ALQAKARNYQ 517
           I+ L K G +  A +LF              E+    C PN V Y  +I  L    R ++
Sbjct: 515 IDGLCKDGRISDAIKLFLAKTGTDTTGSKTNELDRSLCSPNHVMYTALIQGLCTDGRIFK 574

Query: 518 SALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLV 577
           ++ K + DM+ +G  PD  T  ++++      +L +   + A++ +   +P+  VY +L 
Sbjct: 575 AS-KFFSDMRCSGLRPDVFTCIVIIQGHFRAMHLRDVMMLQADILKMGIIPNSSVYRVLA 633

Query: 578 DLWGKAGNVRKAWEWYEAMLQAGL 601
             + ++G ++ A    E +   G+
Sbjct: 634 KGYEESGYLKSALRCSEDLSGIGI 657


>gi|147817754|emb|CAN66662.1| hypothetical protein VITISV_031722 [Vitis vinifera]
          Length = 1060

 Score =  171 bits (434), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 117/410 (28%), Positives = 200/410 (48%), Gaps = 10/410 (2%)

Query: 313 LAEEALGNTNYSMDAYQANQVLKQLQDHTVALGFFNWLRR------QAGFKHDEHTYTTM 366
           L EEAL    Y MD   A Q    + D  V  G F+ + +        G   +  TY T+
Sbjct: 141 LVEEALW-VYYKMDVLPAMQACNMVLDGLVKKGRFDTMWKVYGDMVARGASPNVVTYGTL 199

Query: 367 VGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGC 426
           +    R   F    +L D+M+     P VV Y  LI      + ++EA  +F+ M+  G 
Sbjct: 200 IDGCCRQGDFLKAFRLFDEMIEKKIFPTVVIYTILIRGLCGESRISEAESMFRTMRNSGM 259

Query: 427 EPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQ 486
            P+  TY T++D + K   +  A+++Y +M   GL P+  T+ ++I+ L K   + +A +
Sbjct: 260 LPNLYTYNTMMDGYCKIAHVKKALELYXEMLGDGLLPNVVTFGILIDGLCKTDEMVSARK 319

Query: 487 LFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLG 546
              +M + G +PN+  YN +I    KA N   AL L+ +++     PD  TYSI+++ L 
Sbjct: 320 FLIDMASFGVVPNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLC 379

Query: 547 HCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVP 606
               ++EA+ +  EM++K ++P+   Y  L+D + K GN+ KA E    M + G+ PN+ 
Sbjct: 380 GVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNII 439

Query: 607 TCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGFCHELM 666
           T ++L+  + + G++  A  L   M+  GL P +  YT L+    +  +  +    H+ M
Sbjct: 440 TFSTLIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEM 499

Query: 667 AVSGHPAHMFLLSMPSPG--PDGQNVRDHVGSFLEMMHSEDRESKRGLVD 714
             +G   ++F LS    G   DG+ + D +  FL    ++   SK   +D
Sbjct: 500 QEAGLHPNVFTLSCLIDGLCKDGR-ISDAIKLFLAKTGTDTTGSKTNELD 548



 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 116/422 (27%), Positives = 184/422 (43%), Gaps = 74/422 (17%)

Query: 299 ESVSRILRQWKWGPLAEEALGNTNYSMDAY-QANQVLKQLQDHTVALGFFNWLRRQAGFK 357
           ES+ R +R     P     L   N  MD Y +   V K L+ +   LG         G  
Sbjct: 248 ESMFRTMRNSGMLP----NLYTYNTMMDGYCKIAHVKKALELYXEMLG--------DGLL 295

Query: 358 HDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEAL-- 415
            +  T+  ++  L +  +  +  K L  M   G  PN+  YN LI  Y +A  L+EAL  
Sbjct: 296 PNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSEALSL 355

Query: 416 -----------DVF----------------------KQMQVVGCEPDRVTYCTLIDIHAK 442
                      DVF                      ++M+  G  P+ VTY TLID + K
Sbjct: 356 HSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCK 415

Query: 443 AGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVT 502
            G ++ A+++  +M   G+ P+  T+S +I+   KAG ++AA  L+ EMV +G +P++V 
Sbjct: 416 EGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVA 475

Query: 503 YNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFA--- 559
           Y  +I    K  N + A +L+++MQ AG  P+  T S +++ L   G + +A  +F    
Sbjct: 476 YTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCKDGRISDAIKLFLAKT 535

Query: 560 ----------EMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCN 609
                     E+ R    P+  +Y  L+      G + KA +++  M  +GLRP+V TC 
Sbjct: 536 GTDTTGSKTNELDRSLCSPNHVMYTALIQGLCTDGRIFKASKFFSDMRCSGLRPDVFTCI 595

Query: 610 SLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLL-------------LSCCTEARSP 656
            ++    R   L D   L   +L +G+ P+   Y +L             LS C E   P
Sbjct: 596 VIIQGHFRAMHLRDVMMLQADILKMGIIPNSSVYRVLAKGYEESGYLKSALSFCGEGVQP 655

Query: 657 YD 658
            D
Sbjct: 656 LD 657



 Score =  114 bits (286), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 85/335 (25%), Positives = 147/335 (43%), Gaps = 4/335 (1%)

Query: 332 QVLKQLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGC 391
           Q L++ +   +    FN L R    K   + +  ++       + G + + L    +   
Sbjct: 98  QCLQKSRRSRICCSVFNVLSRLESSKFTPNVFGVLIIAFS---EMGLVEEALWVYYKMDV 154

Query: 392 QPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMD 451
            P +   N ++    +    +    V+  M   G  P+ VTY TLID   + G    A  
Sbjct: 155 LPAMQACNMVLDGLVKKGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFR 214

Query: 452 MYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQA 511
           ++ +M    + P    Y+++I  L     +  A  +F  M N G +PNL TYN M+    
Sbjct: 215 LFDEMIEKKIFPTVVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYC 274

Query: 512 KARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEP 571
           K  + + AL+LY +M   G  P+ VT+ I+++ L     +  A     +M     VP+  
Sbjct: 275 KIAHVKKALELYXEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIF 334

Query: 572 VYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGM 631
           VY  L+D + KAGN+ +A   +  + +  + P+V T + L+     V ++ +A  LLQ M
Sbjct: 335 VYNCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEM 394

Query: 632 LNLGLKPSLQTY-TLLLSCCTEARSPYDMGFCHEL 665
              G  P+  TY TL+   C E      +  C ++
Sbjct: 395 KKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQM 429



 Score = 71.2 bits (173), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 60/220 (27%), Positives = 103/220 (46%), Gaps = 24/220 (10%)

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
           N+AL +F+QMQ+   +PD VT    +   A  G LD+   ++  ++  GL  D    + +
Sbjct: 731 NKALQLFRQMQMDDXQPDIVTVTVALSACADLGALDMGEWIHAYIRHRGLDTDLCLNNSL 790

Query: 472 INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQ---- 527
           IN   K G +  A +LF     +    ++ T+  MI   A     + AL+L+ +M+    
Sbjct: 791 INMYSKCGEIGTARRLFDGTQKK----DVTTWTSMIVGHALHGQAEEALQLFTEMKETNK 846

Query: 528 -------NAGFE-----PDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRK-NWVPDEPVYG 574
                  N   E     P+ VT+  V+    H G ++E +  F  M+   +  P    +G
Sbjct: 847 RARKNKRNGEXESSLVLPNDVTFMGVLMACSHAGLVEEGKQHFRSMKEDYSLRPRISHFG 906

Query: 575 LLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSA 614
            +VDL  +AG + +A+E+   +L+  +RPN     +LL A
Sbjct: 907 CMVDLLCRAGLLTEAYEF---ILKMPVRPNAVVWRTLLGA 943


>gi|254939549|ref|NP_001157212.1| pentatricopeptide repeat10 [Zea mays]
 gi|218684531|gb|ACL01094.1| chloroplast pentatricopeptide repeat protein 10 [Zea mays]
 gi|223948163|gb|ACN28165.1| unknown [Zea mays]
 gi|413943497|gb|AFW76146.1| pentatricopeptide repeat10 [Zea mays]
          Length = 786

 Score =  171 bits (434), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 96/298 (32%), Positives = 149/298 (50%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           R AG + D  T +T++    R           + +   G  P VVTYN L+  +G+A   
Sbjct: 237 RAAGVEPDGFTASTVIAACCRDGLVDEAVAFFEDLKARGHAPCVVTYNALLQVFGKAGNY 296

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
            EAL V  +M+  GC+PD VTY  L   +A+AGF + A      M + GL P+ FTY+ +
Sbjct: 297 TEALRVLGEMEQNGCQPDAVTYNELAGTYARAGFFEEAARCLDTMASKGLLPNAFTYNTV 356

Query: 472 INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF 531
           +   G  G +  A  LF +M   G +PN+ TYN+++ +  K   +   L++  +M  +G 
Sbjct: 357 MTAYGNVGKVDEALALFDQMKKTGFVPNVNTYNLVLGMLGKKSRFTVMLEMLGEMSRSGC 416

Query: 532 EPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWE 591
            P++VT++ ++ V G  G  D    V   MR          Y  L+  +G+ G+   A++
Sbjct: 417 TPNRVTWNTMLAVCGKRGMEDYVTRVLEGMRSCGVELSRDTYNTLIAAYGRCGSRTNAFK 476

Query: 592 WYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSC 649
            Y  M  AG  P + T N+LL+   R G  S A  ++  M   G KP+ Q+Y+LLL C
Sbjct: 477 MYNEMTSAGFTPCITTYNALLNVLSRQGDWSTAQSIVSKMRTKGFKPNEQSYSLLLQC 534



 Score =  157 bits (398), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 99/346 (28%), Positives = 167/346 (48%), Gaps = 5/346 (1%)

Query: 307 QWKWGPLAEEALGNTNYSMDAYQANQVLKQLQ---DHTVALGFFNWLRRQAGFKHDEHTY 363
            W+W  LA         + DA     V++ L     H       +      G + D   Y
Sbjct: 119 HWEWA-LALLRWAGKEGAADASALEMVVRALGREGQHDAVCALLDETPLPPGSRLDVRAY 177

Query: 364 TTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGR-ANYLNEALDVFKQMQ 422
           TT++  L RA ++    +L  ++ R G  P +VTYN ++  YGR        + +  +M+
Sbjct: 178 TTVLHALSRAGRYERALELFAELRRQGVAPTLVTYNVVLDVYGRMGRSWPRIVALLDEMR 237

Query: 423 VVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQ 482
             G EPD  T  T+I    + G +D A+  ++ ++A G +P   TY+ ++   GKAG+  
Sbjct: 238 AAGVEPDGFTASTVIAACCRDGLVDEAVAFFEDLKARGHAPCVVTYNALLQVFGKAGNYT 297

Query: 483 AAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVM 542
            A ++  EM   GC P+ VTYN +    A+A  ++ A +    M + G  P+  TY+ VM
Sbjct: 298 EALRVLGEMEQNGCQPDAVTYNELAGTYARAGFFEEAARCLDTMASKGLLPNAFTYNTVM 357

Query: 543 EVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLR 602
              G+ G +DEA A+F +M++  +VP+   Y L++ + GK        E    M ++G  
Sbjct: 358 TAYGNVGKVDEALALFDQMKKTGFVPNVNTYNLVLGMLGKKSRFTVMLEMLGEMSRSGCT 417

Query: 603 PNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
           PN  T N++L+   + G       +L+GM + G++ S  TY  L++
Sbjct: 418 PNRVTWNTMLAVCGKRGMEDYVTRVLEGMRSCGVELSRDTYNTLIA 463



 Score =  147 bits (372), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 115/440 (26%), Positives = 186/440 (42%), Gaps = 83/440 (18%)

Query: 294 TGNVVESV-SRILRQWKWGPLAEEALGNTNYSMDAYQANQVLKQ-----LQDHTVALGFF 347
           T NVV  V  R+ R W       + +       D + A+ V+       L D  VA  FF
Sbjct: 211 TYNVVLDVYGRMGRSWPRIVALLDEMRAAGVEPDGFTASTVIAACCRDGLVDEAVA--FF 268

Query: 348 NWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGR 407
             L+ + G      TY  ++ + G+A  +    ++L +M ++GCQP+ VTYN L  +Y R
Sbjct: 269 EDLKAR-GHAPCVVTYNALLQVFGKAGNYTEALRVLGEMEQNGCQPDAVTYNELAGTYAR 327

Query: 408 ANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFT 467
           A +  EA      M   G  P+  TY T++  +   G +D A+ ++ +M+  G  P+  T
Sbjct: 328 AGFFEEAARCLDTMASKGLLPNAFTYNTVMTAYGNVGKVDEALALFDQMKKTGFVPNVNT 387

Query: 468 YSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAK--ARNY--------- 516
           Y++++  LGK        ++  EM   GC PN VT+N M+A+  K    +Y         
Sbjct: 388 YNLVLGMLGKKSRFTVMLEMLGEMSRSGCTPNRVTWNTMLAVCGKRGMEDYVTRVLEGMR 447

Query: 517 ------------------------QSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLD 552
                                    +A K+Y +M +AGF P   TY+ ++ VL   G   
Sbjct: 448 SCGVELSRDTYNTLIAAYGRCGSRTNAFKMYNEMTSAGFTPCITTYNALLNVLSRQGDWS 507

Query: 553 EAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVR----------------KAWEWYEAM 596
            A+++ ++MR K + P+E  Y LL+  + K GNV                  +W     +
Sbjct: 508 TAQSIVSKMRTKGFKPNEQSYSLLLQCYAKGGNVAGIAAIENEVYGSGAVFPSWVILRTL 567

Query: 597 LQA--------------------GLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGL 636
           + A                    G  P++   NS+LS + + G  S A  +   +   GL
Sbjct: 568 VIANFKCRRLDGMETAFQEVKARGYNPDLVIFNSMLSIYAKNGMYSKATEVFDSIKRSGL 627

Query: 637 KPSLQTYTLLLSC---CTEA 653
            P L TY  L+     C+E+
Sbjct: 628 SPDLITYNSLMDMYAKCSES 647



 Score =  142 bits (359), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 102/389 (26%), Positives = 187/389 (48%), Gaps = 28/389 (7%)

Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLI 402
           AL  F+ +++  GF  + +TY  ++G+LG+  +F  + ++L +M R GC PN VT+N ++
Sbjct: 369 ALALFDQMKK-TGFVPNVNTYNLVLGMLGKKSRFTVMLEMLGEMSRSGCTPNRVTWNTML 427

Query: 403 HSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLS 462
              G+    +    V + M+  G E  R TY TLI  + + G    A  MY +M +AG +
Sbjct: 428 AVCGKRGMEDYVTRVLEGMRSCGVELSRDTYNTLIAAYGRCGSRTNAFKMYNEMTSAGFT 487

Query: 463 PDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKL 522
           P   TY+ ++N L + G    A  +  +M  +G  PN  +Y++++   AK  N      +
Sbjct: 488 PCITTYNALLNVLSRQGDWSTAQSIVSKMRTKGFKPNEQSYSLLLQCYAKGGNVAGIAAI 547

Query: 523 YRDMQNAG-FEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWG 581
             ++  +G   P  V    ++     C  LD  E  F E++ + + PD  ++  ++ ++ 
Sbjct: 548 ENEVYGSGAVFPSWVILRTLVIANFKCRRLDGMETAFQEVKARGYNPDLVIFNSMLSIYA 607

Query: 582 KAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLL-QGMLNLGLKPSL 640
           K G   KA E ++++ ++GL P++ T NSL+  + +  +  +A  +L Q   +  +KP +
Sbjct: 608 KNGMYSKATEVFDSIKRSGLSPDLITYNSLMDMYAKCSESWEAEKILNQLKCSQTMKPDV 667

Query: 641 QTYTLLLSCCTEARSPYDMGFCHELMAVSGHPAHMFLLSMPSPG--PDGQNVRDHVGSFL 698
            +Y  +++           GFC + +      A   L  M + G  P        VG + 
Sbjct: 668 VSYNTVIN-----------GFCKQGLV---KEAQRVLSEMVADGMAPCAVTYHTLVGGYS 713

Query: 699 EM-MHSEDRESKRGLVDAVVDFLHKSGLK 726
            + M SE RE        V+ ++ + GLK
Sbjct: 714 SLEMFSEARE--------VIGYMVQHGLK 734



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 87/310 (28%), Positives = 150/310 (48%), Gaps = 4/310 (1%)

Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQM-VRDGCQPNVVTYNRL 401
           AL    W  ++     D      +V  LGR  Q  A+  LLD+  +  G + +V  Y  +
Sbjct: 123 ALALLRWAGKEGA--ADASALEMVVRALGREGQHDAVCALLDETPLPPGSRLDVRAYTTV 180

Query: 402 IHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAG-FLDVAMDMYKKMQAAG 460
           +H+  RA     AL++F +++  G  P  VTY  ++D++ + G      + +  +M+AAG
Sbjct: 181 LHALSRAGRYERALELFAELRRQGVAPTLVTYNVVLDVYGRMGRSWPRIVALLDEMRAAG 240

Query: 461 LSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSAL 520
           + PD FT S +I    + G +  A   F ++  +G  P +VTYN ++ +  KA NY  AL
Sbjct: 241 VEPDGFTASTVIAACCRDGLVDEAVAFFEDLKARGHAPCVVTYNALLQVFGKAGNYTEAL 300

Query: 521 KLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLW 580
           ++  +M+  G +PD VTY+ +       G+ +EA      M  K  +P+   Y  ++  +
Sbjct: 301 RVLGEMEQNGCQPDAVTYNELAGTYARAGFFEEAARCLDTMASKGLLPNAFTYNTVMTAY 360

Query: 581 GKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSL 640
           G  G V +A   ++ M + G  PNV T N +L    +  + +    +L  M   G  P+ 
Sbjct: 361 GNVGKVDEALALFDQMKKTGFVPNVNTYNLVLGMLGKKSRFTVMLEMLGEMSRSGCTPNR 420

Query: 641 QTYTLLLSCC 650
            T+  +L+ C
Sbjct: 421 VTWNTMLAVC 430



 Score = 92.4 bits (228), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 75/332 (22%), Positives = 136/332 (40%), Gaps = 40/332 (12%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           R  G +    TY T++   GR        K+ ++M   G  P + TYN L++   R    
Sbjct: 447 RSCGVELSRDTYNTLIAAYGRCGSRTNAFKMYNEMTSAGFTPCITTYNALLNVLSRQGDW 506

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAG--------------------------- 444
           + A  +  +M+  G +P+  +Y  L+  +AK G                           
Sbjct: 507 STAQSIVSKMRTKGFKPNEQSYSLLLQCYAKGGNVAGIAAIENEVYGSGAVFPSWVILRT 566

Query: 445 ---------FLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQG 495
                     LD     +++++A G +PD   ++ +++   K G    A ++F  +   G
Sbjct: 567 LVIANFKCRRLDGMETAFQEVKARGYNPDLVIFNSMLSIYAKNGMYSKATEVFDSIKRSG 626

Query: 496 CIPNLVTYNIMIALQAKARNYQSALKLYRDMQ-NAGFEPDKVTYSIVMEVLGHCGYLDEA 554
             P+L+TYN ++ + AK      A K+   ++ +   +PD V+Y+ V+      G + EA
Sbjct: 627 LSPDLITYNSLMDMYAKCSESWEAEKILNQLKCSQTMKPDVVSYNTVINGFCKQGLVKEA 686

Query: 555 EAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSA 614
           + V +EM      P    Y  LV  +       +A E    M+Q GL+P   T   ++ +
Sbjct: 687 QRVLSEMVADGMAPCAVTYHTLVGGYSSLEMFSEAREVIGYMVQHGLKPMELTYRRVVES 746

Query: 615 FLRVGQLSDAYHLLQGMLNLGL---KPSLQTY 643
           + R  +  +A   L  +    L   K +L+ Y
Sbjct: 747 YCRAKRFEEARGFLSEVSETDLDFDKKALEAY 778



 Score = 76.6 bits (187), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 57/214 (26%), Positives = 90/214 (42%), Gaps = 36/214 (16%)

Query: 464 DTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAK-ARNYQSALKL 522
           D   Y+ +++ L +AG  + A +LF E+  QG  P LVTYN+++ +  +  R++   + L
Sbjct: 173 DVRAYTTVLHALSRAGRYERALELFAELRRQGVAPTLVTYNVVLDVYGRMGRSWPRIVAL 232

Query: 523 YRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGK 582
             +M+ AG EPD  T S V+      G +DEA A F +++ +                  
Sbjct: 233 LDEMRAAGVEPDGFTASTVIAACCRDGLVDEAVAFFEDLKAR------------------ 274

Query: 583 AGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQT 642
                            G  P V T N+LL  F + G  ++A  +L  M   G +P   T
Sbjct: 275 -----------------GHAPCVVTYNALLQVFGKAGNYTEALRVLGEMEQNGCQPDAVT 317

Query: 643 YTLLLSCCTEARSPYDMGFCHELMAVSGHPAHMF 676
           Y  L      A    +   C + MA  G   + F
Sbjct: 318 YNELAGTYARAGFFEEAARCLDTMASKGLLPNAF 351



 Score = 73.6 bits (179), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 43/190 (22%), Positives = 85/190 (44%), Gaps = 1/190 (0%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           G+  D   + +M+ I  +   +    ++ D + R G  P+++TYN L+  Y + +   EA
Sbjct: 591 GYNPDLVIFNSMLSIYAKNGMYSKATEVFDSIKRSGLSPDLITYNSLMDMYAKCSESWEA 650

Query: 415 LDVFKQMQVVGC-EPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIIN 473
             +  Q++     +PD V+Y T+I+   K G +  A  +  +M A G++P   TY  ++ 
Sbjct: 651 EKILNQLKCSQTMKPDVVSYNTVINGFCKQGLVKEAQRVLSEMVADGMAPCAVTYHTLVG 710

Query: 474 CLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEP 533
                     A ++   MV  G  P  +TY  ++    +A+ ++ A     ++     + 
Sbjct: 711 GYSSLEMFSEAREVIGYMVQHGLKPMELTYRRVVESYCRAKRFEEARGFLSEVSETDLDF 770

Query: 534 DKVTYSIVME 543
           DK      +E
Sbjct: 771 DKKALEAYIE 780



 Score = 45.1 bits (105), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 29/119 (24%), Positives = 51/119 (42%)

Query: 346 FFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSY 405
             N L+     K D  +Y T++    +        ++L +MV DG  P  VTY+ L+  Y
Sbjct: 653 ILNQLKCSQTMKPDVVSYNTVINGFCKQGLVKEAQRVLSEMVADGMAPCAVTYHTLVGGY 712

Query: 406 GRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPD 464
                 +EA +V   M   G +P  +TY  +++ + +A   + A     ++    L  D
Sbjct: 713 SSLEMFSEAREVIGYMVQHGLKPMELTYRRVVESYCRAKRFEEARGFLSEVSETDLDFD 771


>gi|414872432|tpg|DAA50989.1| TPA: hypothetical protein ZEAMMB73_390723 [Zea mays]
          Length = 604

 Score =  171 bits (433), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 113/384 (29%), Positives = 186/384 (48%), Gaps = 16/384 (4%)

Query: 282 AGLAPFSRHFASTGNVVESVSRILRQWKWGPLAEEALGNTNYSMDAYQANQVLKQLQDHT 341
           A +AP  R+  S   + E   RIL+ +KWGP AE+AL      +D +   +V+K      
Sbjct: 14  ATIAP--RYTHSVRVLDERFIRILKIFKWGPDAEKALEVLMLRVDHWLVREVMKTDVGVN 71

Query: 342 VALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDG-CQPNVVTYNR 400
           V + FF W  ++  ++HD  TY  ++  L    Q+G + K++ +MVR+  C       + 
Sbjct: 72  VKMQFFRWAAKRRNYEHDTSTYMALIHCLEVVEQYGEMWKMIQEMVRNPICVVTPTELSD 131

Query: 401 LIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAG 460
           ++   G A  + +A+ +F Q++   C+P    Y ++I +    G  +    +Y +M   G
Sbjct: 132 VVRMLGNAKMVRQAITIFYQIKTRKCQPIAQAYNSMIIMLMHEGQYEKVHQLYNEMSTEG 191

Query: 461 -LSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSA 519
              PDT TYS +I+   K G   +A QL  EM   G  P    Y ++IAL  K  +   A
Sbjct: 192 HCFPDTVTYSALISAFCKLGRRDSAIQLLNEMKEIGMQPTTKIYTMLIALFFKFNDAHGA 251

Query: 520 LKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDL 579
           L L+ +M++    PD  TY+ ++  LG  G +DEA   F EM+R+   PD      +++ 
Sbjct: 252 LSLFEEMRHQYCRPDVFTYTELIRGLGKAGRIDEAYHFFCEMQREGCRPDTVFMNNMINF 311

Query: 580 WGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSA-FLRVGQLSDAYHLLQGMLNLGLKP 638
            GKAG +  A + ++ M      P+V T N+++ A F    + S+     + M   G+ P
Sbjct: 312 LGKAGRLDDAMKLFQEMETLRCIPSVVTYNTIIKALFESKSRASEVPSWFERMKESGISP 371

Query: 639 SLQTYTLLLSCCTEARSPYDMGFC 662
           S  TY++L+            GFC
Sbjct: 372 SSFTYSILID-----------GFC 384



 Score =  143 bits (360), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 98/359 (27%), Positives = 165/359 (45%), Gaps = 39/359 (10%)

Query: 336 QLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNV 395
           +  D   AL  F  +R Q   + D  TYT ++  LG+A +         +M R+GC+P+ 
Sbjct: 244 KFNDAHGALSLFEEMRHQYC-RPDVFTYTELIRGLGKAGRIDEAYHFFCEMQREGCRPDT 302

Query: 396 VTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLID--IHAKAGFLDVAMDMY 453
           V  N +I+  G+A  L++A+ +F++M+ + C P  VTY T+I     +K+   +V    +
Sbjct: 303 VFMNNMINFLGKAGRLDDAMKLFQEMETLRCIPSVVTYNTIIKALFESKSRASEVP-SWF 361

Query: 454 KKMQAAGLSPDTFTYSVIIN-----------------------------------CLGKA 478
           ++M+ +G+SP +FTYS++I+                                    LGKA
Sbjct: 362 ERMKESGISPSSFTYSILIDGFCKTNRMEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKA 421

Query: 479 GHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTY 538
                A +LF E+       +   Y +MI    KA     A+ ++ +M   G  PD   Y
Sbjct: 422 KRYDLACELFQELKENCGSSSARVYAVMIKHLGKAGRLDDAINMFDEMNKLGCAPDVYAY 481

Query: 539 SIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQ 598
           + +M  L   G LDEA +    M+    +PD   Y ++++   K G   +A E    M Q
Sbjct: 482 NALMSGLARTGMLDEALSTMRRMQEHGCIPDINSYNIILNGLAKTGGPHRAMEMLSNMKQ 541

Query: 599 AGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPY 657
           + +RP+V + N++L A    G   +A  L++ M  LG +  L TY+ +L    +    Y
Sbjct: 542 STVRPDVVSYNTVLGALSHAGMFEEASKLMKEMNTLGFEYDLITYSSILEAIGKVDHEY 600



 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 85/307 (27%), Positives = 142/307 (46%), Gaps = 1/307 (0%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           ++ G +     YT ++ +  +         L ++M    C+P+V TY  LI   G+A  +
Sbjct: 224 KEIGMQPTTKIYTMLIALFFKFNDAHGALSLFEEMRHQYCRPDVFTYTELIRGLGKAGRI 283

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
           +EA   F +MQ  GC PD V    +I+   KAG LD AM ++++M+     P   TY+ I
Sbjct: 284 DEAYHFFCEMQREGCRPDTVFMNNMINFLGKAGRLDDAMKLFQEMETLRCIPSVVTYNTI 343

Query: 472 INCLGKA-GHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAG 530
           I  L ++          F  M   G  P+  TY+I+I    K    + A+ L  +M   G
Sbjct: 344 IKALFESKSRASEVPSWFERMKESGISPSSFTYSILIDGFCKTNRMEKAMMLLEEMDEKG 403

Query: 531 FEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAW 590
           F P    Y  +++ LG     D A  +F E++         VY +++   GKAG +  A 
Sbjct: 404 FPPCPAAYCSLIDALGKAKRYDLACELFQELKENCGSSSARVYAVMIKHLGKAGRLDDAI 463

Query: 591 EWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCC 650
             ++ M + G  P+V   N+L+S   R G L +A   ++ M   G  P + +Y ++L+  
Sbjct: 464 NMFDEMNKLGCAPDVYAYNALMSGLARTGMLDEALSTMRRMQEHGCIPDINSYNIILNGL 523

Query: 651 TEARSPY 657
            +   P+
Sbjct: 524 AKTGGPH 530


>gi|302780485|ref|XP_002972017.1| hypothetical protein SELMODRAFT_96794 [Selaginella moellendorffii]
 gi|300160316|gb|EFJ26934.1| hypothetical protein SELMODRAFT_96794 [Selaginella moellendorffii]
          Length = 1116

 Score =  171 bits (433), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 132/440 (30%), Positives = 210/440 (47%), Gaps = 40/440 (9%)

Query: 344 LGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFG-AINKLLDQMVRDGCQPNVVTYNRLI 402
           LGFF  +R  +    D   Y  ++  L RA +   A+     +M RDG  P +VTYN +I
Sbjct: 167 LGFFRRIRSSSRSVAD---YNIVLQSLCRAGETARALEIFRGEMARDGVAPTIVTYNTII 223

Query: 403 HSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLS 462
           +   ++N L   +++F+++   G  PD VTY TLID   KAG L+ A  ++  M +    
Sbjct: 224 NGLCKSNELGAGMELFEELVERGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRSCV 283

Query: 463 PDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGC--IPNLVTYNIMIALQAKARNYQSAL 520
           P+  TYSV+IN L K G +  A +L  EM  + C  +PN++TYN  +    K      A 
Sbjct: 284 PNVVTYSVLINGLCKVGRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEAC 343

Query: 521 KLYRDMQNAGFE--PDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVD 578
           +L R +++      PD VT+S +++ L  CG +DEA +VF +M    +VP+   Y  LV+
Sbjct: 344 ELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVN 403

Query: 579 LWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKP 638
              KA  + +A    E+M+  G+ P+V T + L+ AF +  ++ +A  LL GM + G  P
Sbjct: 404 GLCKADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTP 463

Query: 639 SLQTY-TLLLSCCTEARSPY------DMGFCHELMA--------VSG-------HPAHMF 676
           ++ T+ +++   C   RS        DM   H L+         + G         A   
Sbjct: 464 NVVTFNSIIDGLCKSDRSGEAFQMFDDMALKHGLVPDKITYCTLIDGLFRTGRAGQAEAL 523

Query: 677 LLSMPSPGPDGQNV----RDHVGSFLEMMHSEDRESKRGLVDAVVDF------LHKSGLK 726
           L +MP P     N        +G     +   +R  +  LV   V F        K+G  
Sbjct: 524 LDAMPDPDTYAFNCCINGLSKLGDVSRALQVYNRMLELELVPDKVTFNILIAGACKAGNF 583

Query: 727 EEAGSVWEVAAQKNVYPDAV 746
           E+A +++E    KN+ PD +
Sbjct: 584 EQASALFEEMVAKNLQPDVM 603



 Score =  152 bits (384), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 119/430 (27%), Positives = 203/430 (47%), Gaps = 38/430 (8%)

Query: 354  AGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNE 413
            +G   D  TY ++V  L RA +     +L+ ++   G  P+ VTYN L+    ++    +
Sbjct: 666  SGCVPDSITYGSLVYALCRASRTDDALQLVSELKSFGWDPDTVTYNILVDGLWKSGQTEQ 725

Query: 414  ALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAA---GLSPDTFTYSV 470
            A+ V ++M   G  PD VTY TLID   KAG L+ A  ++  M +       P+  TYSV
Sbjct: 726  AITVLEEMVGKGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRVSRCCVPNVVTYSV 785

Query: 471  IINCLGKAGHLQAAHQLFCEMVNQGC--IPNLVTYNIMIALQAKARNYQSALKLYRDMQN 528
            +IN L K G +  A +L  EM+ + C  +PN++TYN  +    K      A +L R +++
Sbjct: 786  LINGLCKVGRIDEARELIQEMMRKSCDVLPNIITYNSFLDGLCKQSMMAEACELMRSLRD 845

Query: 529  AGFE--PDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNV 586
                  PD VT+S +++ L  CG  DEA  VF +M    +VP+   Y +L++   K   +
Sbjct: 846  GSLRVSPDTVTFSTLIDGLCKCGQTDEACNVFDDMIAGGYVPNVVTYNVLMNGLCKTDKM 905

Query: 587  RKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTY-TL 645
             +A    E+M+  G+ P+V T + L+ AF +   + +A  LL GM + G  P++ T+ ++
Sbjct: 906  ERAHAMIESMVDKGVTPDVITYSVLVDAFCKASHVDEALELLHGMASRGCTPNVVTFNSI 965

Query: 646  LLSCCTEARS-----------------PYDMGFCHELMAV-----SGHPAHMFLLSMPSP 683
            +   C   +S                 P  + +C  +  +     +G  A + L +MP P
Sbjct: 966  IDGLCKSDQSGEAFQMFDDMTLKHGLAPDKITYCTLIDGLFRTGWAGQ-AEVLLDAMPDP 1024

Query: 684  GP-------DGQNVRDHVGSFLEMMHSEDRESKRGLVDAVVDFLHKSGLKEEAGSVWEVA 736
                     +G +    V   L  M   +    +   + ++    K+G  E+A +++E  
Sbjct: 1025 DTYAFNCCINGLSKLGDVSRALHRMLELELVPDKVTFNILIAGACKAGNFEQASALFEEM 1084

Query: 737  AQKNVYPDAV 746
              KN+ PD +
Sbjct: 1085 VAKNLQPDVM 1094



 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 132/485 (27%), Positives = 216/485 (44%), Gaps = 29/485 (5%)

Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLI 402
           A   F+ +  + G   D+ TY T++  L R  + G    LLD M      P+   +N  I
Sbjct: 484 AFQMFDDMALKHGLVPDKITYCTLIDGLFRTGRAGQAEALLDAMP----DPDTYAFNCCI 539

Query: 403 HSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLS 462
           +   +   ++ AL V+ +M  +   PD+VT+  LI    KAG  + A  ++++M A  L 
Sbjct: 540 NGLSKLGDVSRALQVYNRMLELELVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNLQ 599

Query: 463 PDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKL 522
           PD  T+  +I+ L KAG ++AA  +   M N G  PN+VTYN ++    K+   + A + 
Sbjct: 600 PDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNALVHGLCKSGRIEEACQF 659

Query: 523 YRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGK 582
             +M ++G  PD +TY  ++  L      D+A  + +E++   W PD   Y +LVD   K
Sbjct: 660 LEEMVSSGCVPDSITYGSLVYALCRASRTDDALQLVSELKSFGWDPDTVTYNILVDGLWK 719

Query: 583 AGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGM---LNLGLKPS 639
           +G   +A    E M+  G  P+V T N+L+ +  + G L +A  L   M   ++    P+
Sbjct: 720 SGQTEQAITVLEEMVGKGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRVSRCCVPN 779

Query: 640 LQTYTLLLS-CCTEARSPYDMGFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFL 698
           + TY++L++  C   R         E+M  S       +    +   DG   +  +    
Sbjct: 780 VVTYSVLINGLCKVGRIDEARELIQEMMRKSCDVLPNIITY--NSFLDGLCKQSMMAEAC 837

Query: 699 EMMHSEDRESKRGLVDAV-----VDFLHKSGLKEEAGSVWEVAAQKNVYPDAVKEKGMSY 753
           E+M S    S R   D V     +D L K G  +EA +V++        P+ V    +  
Sbjct: 838 ELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQTDEACNVFDDMIAGGYVPNVVTYNVLMN 897

Query: 754 WLINLHVMSDGTAVIALSRTLAWFRKQMLISGVGPSRIDIVTGWGRRSRVTGTSLVRQAV 813
            L     M    A+I          + M+  GV P   D++T           S V +A+
Sbjct: 898 GLCKTDKMERAHAMI----------ESMVDKGVTP---DVITYSVLVDAFCKASHVDEAL 944

Query: 814 QELLH 818
            ELLH
Sbjct: 945 -ELLH 948



 Score =  149 bits (377), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 117/421 (27%), Positives = 189/421 (44%), Gaps = 69/421 (16%)

Query: 359 DEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVF 418
           D  T++T++  L +  Q      + D M+  G  PNV+TYN L++   +A+ +  A  + 
Sbjct: 359 DTVTFSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADKMERAHAMI 418

Query: 419 KQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKA 478
           + M   G  PD +TY  L+D   KA  +D A+++   M + G +P+  T++ II+ L K+
Sbjct: 419 ESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVVTFNSIIDGLCKS 478

Query: 479 GHLQAAHQLFCEM-VNQGCIPNLVTYNIMI--------ALQAKAR--------------- 514
                A Q+F +M +  G +P+ +TY  +I        A QA+A                
Sbjct: 479 DRSGEAFQMFDDMALKHGLVPDKITYCTLIDGLFRTGRAGQAEALLDAMPDPDTYAFNCC 538

Query: 515 --------NYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNW 566
                   +   AL++Y  M      PDKVT++I++      G  ++A A+F EM  KN 
Sbjct: 539 INGLSKLGDVSRALQVYNRMLELELVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNL 598

Query: 567 VPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYH 626
            PD   +G L+D   KAG V  A +  + M   G+ PNV T N+L+    + G++ +A  
Sbjct: 599 QPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNALVHGLCKSGRIEEACQ 658

Query: 627 LLQGMLNLGLKPSLQTY-TLLLSCCTEARSPYDMGFCHELMAVSGHPAHMFLLSMPSPGP 685
            L+ M++ G  P   TY +L+ + C  +R+   +    EL                S G 
Sbjct: 659 FLEEMVSSGCVPDSITYGSLVYALCRASRTDDALQLVSEL---------------KSFGW 703

Query: 686 DGQNVRDHVGSFLEMMHSEDRESKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDA 745
           D   V  ++                     +VD L KSG  E+A +V E    K  +PD 
Sbjct: 704 DPDTVTYNI---------------------LVDGLWKSGQTEQAITVLEEMVGKGHHPDV 742

Query: 746 V 746
           V
Sbjct: 743 V 743



 Score =  147 bits (372), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 110/424 (25%), Positives = 194/424 (45%), Gaps = 17/424 (4%)

Query: 362 TYTTMVGILGRARQFGAINKLLDQMVRDGCQ--PNVVTYNRLIHSYGRANYLNEALDVFK 419
           TY+ ++  L +  +     +L+ +M R  C   PN++TYN  +    + +   EA ++ +
Sbjct: 288 TYSVLINGLCKVGRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMR 347

Query: 420 QMQ--VVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGK 477
            ++   +   PD VT+ TLID   K G +D A  ++  M A G  P+  TY+ ++N L K
Sbjct: 348 SLRDGSLRVSPDTVTFSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCK 407

Query: 478 AGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVT 537
           A  ++ AH +   MV++G  P+++TY++++    KA     AL+L   M + G  P+ VT
Sbjct: 408 ADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVVT 467

Query: 538 YSIVMEVLGHCGYLDEAEAVFAEMRRKN-WVPDEPVYGLLVDLWGKAGNVRKAWEWYEAM 596
           ++ +++ L       EA  +F +M  K+  VPD+  Y  L+D   + G   +A    EA+
Sbjct: 468 FNSIIDGLCKSDRSGEAFQMFDDMALKHGLVPDKITYCTLIDGLFRTGRAGQA----EAL 523

Query: 597 LQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS-CCTEARS 655
           L A   P+    N  ++   ++G +S A  +   ML L L P   T+ +L++  C     
Sbjct: 524 LDAMPDPDTYAFNCCINGLSKLGDVSRALQVYNRMLELELVPDKVTFNILIAGACKAGNF 583

Query: 656 PYDMGFCHELMAVSGHPAHMF---LLSMPSPGPDGQNVRDHVGSFLEMMHSEDRESKRGL 712
                   E++A +  P  M    L+         +  RD     L++M +         
Sbjct: 584 EQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAARD----ILDLMGNLGVPPNVVT 639

Query: 713 VDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAVKEKGMSYWLINLHVMSDGTAVIALSR 772
            +A+V  L KSG  EEA    E        PD++    + Y L       D   +++  +
Sbjct: 640 YNALVHGLCKSGRIEEACQFLEEMVSSGCVPDSITYGSLVYALCRASRTDDALQLVSELK 699

Query: 773 TLAW 776
           +  W
Sbjct: 700 SFGW 703



 Score =  112 bits (279), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 70/239 (29%), Positives = 121/239 (50%), Gaps = 8/239 (3%)

Query: 354  AGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNE 413
             G+  +  TY  ++  L +  +    + +++ MV  G  P+V+TY+ L+ ++ +A++++E
Sbjct: 883  GGYVPNVVTYNVLMNGLCKTDKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASHVDE 942

Query: 414  ALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAA-GLSPDTFTYSVII 472
            AL++   M   GC P+ VT+ ++ID   K+     A  M+  M    GL+PD  TY  +I
Sbjct: 943  ALELLHGMASRGCTPNVVTFNSIIDGLCKSDQSGEAFQMFDDMTLKHGLAPDKITYCTLI 1002

Query: 473  NCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFE 532
            + L + G    A  L   M +    P+   +N  I   +K  +   AL    +++     
Sbjct: 1003 DGLFRTGWAGQAEVLLDAMPD----PDTYAFNCCINGLSKLGDVSRALHRMLELE---LV 1055

Query: 533  PDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWE 591
            PDKVT++I++      G  ++A A+F EM  KN  PD   +G L+D   KAG V   W+
Sbjct: 1056 PDKVTFNILIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEATWD 1114



 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 42/141 (29%), Positives = 70/141 (49%), Gaps = 7/141 (4%)

Query: 343  ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLI 402
            A   F+ +  + G   D+ TY T++  L R    G    LLD M      P+   +N  I
Sbjct: 978  AFQMFDDMTLKHGLAPDKITYCTLIDGLFRTGWAGQAEVLLDAMP----DPDTYAFNCCI 1033

Query: 403  HSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLS 462
            +   +   ++ AL    ++++V   PD+VT+  LI    KAG  + A  ++++M A  L 
Sbjct: 1034 NGLSKLGDVSRALHRMLELELV---PDKVTFNILIAGACKAGNFEQASALFEEMVAKNLQ 1090

Query: 463  PDTFTYSVIINCLGKAGHLQA 483
            PD  T+  +I+ L KAG ++A
Sbjct: 1091 PDVMTFGALIDGLCKAGQVEA 1111


>gi|224137224|ref|XP_002322504.1| predicted protein [Populus trichocarpa]
 gi|222867134|gb|EEF04265.1| predicted protein [Populus trichocarpa]
          Length = 647

 Score =  171 bits (433), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 121/517 (23%), Positives = 230/517 (44%), Gaps = 43/517 (8%)

Query: 318 LGNTNYSMDAYQANQVLKQLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFG 377
            GN  +  DA     +L  + +   AL    + R +  F  +   Y   + +L + R   
Sbjct: 84  FGNKLFEHDAVV---ILNNMSNPDTALLALKFFRERLEFNREVVVYNVTMKVLRKCRDLN 140

Query: 378 AINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLI 437
            + KL D+M+    +P+ VT++ +I      N  ++A++ F++M   G +PD VT+ T+I
Sbjct: 141 KVEKLFDEMIERAVKPDNVTFSTIISCARLCNLADKAVEWFEKMPSFGLDPDDVTFSTMI 200

Query: 438 DIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCI 497
           D + + G ++ A+ +Y + +      DT T+S +I     +G+      ++ EM   G  
Sbjct: 201 DSYGRVGNVEKALSLYDRARTEKWRLDTTTFSTLIRIYKDSGNFDCCLNVYEEMKALGVK 260

Query: 498 PNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAV 557
           PNLV YN ++    +AR    A K Y+D+ ++G  P   TY+ ++   G   Y ++   +
Sbjct: 261 PNLVIYNTLLDAMGRARRPWQAKKFYQDIIDSGLSPSYATYAALLRAYGRARYGEDTIKI 320

Query: 558 FAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLR 617
           + EM+ K    +  +Y  ++ +    G V +A E +E M  +G+ P+  T +S+++    
Sbjct: 321 YKEMKEKELSLNVLLYNTILAMCADLGFVDEAIEIFEDMKNSGISPDSWTFSSMITMSSC 380

Query: 618 VGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDM----------------GF 661
            G++S+A ++L  M   G +P++   T L+ C  +A+   D+                 F
Sbjct: 381 CGKVSEAENMLNEMFEAGFQPNIFVLTSLIQCYGKAQRIDDVVKTFNRLYELLITPDDRF 440

Query: 662 CHELMAV-----------------SGHP--AHMFLLSMPSPGPDGQNVRDHVGSFLEMMH 702
           C  L+ V                   +P   H+  L +   G +G N +       + + 
Sbjct: 441 CGCLLNVMTQTPNEELGKLVDCVERANPKLGHVVKLLVEEQGNEG-NFKKEAADLFDNIS 499

Query: 703 SEDRESKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAVKEKGMSYWLINLHVMS 762
           +   E K+   + ++D   K  + E A  + +      +Y D ++ K  + W +NL  +S
Sbjct: 500 T---EVKKAYCNCLIDLCVKLNMLERACELLDHGLTLGIYTD-IQSKTSTQWSLNLKSLS 555

Query: 763 DGTAVIALSRTLAWFRKQMLISGVGPSRIDIVTGWGR 799
            G A+ AL   +    K +      P  + I TG G+
Sbjct: 556 SGAALTALHVWINDLSKALEAGEQLPPLLGINTGHGK 592


>gi|225435038|ref|XP_002281336.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g59900 [Vitis vinifera]
          Length = 900

 Score =  171 bits (433), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 115/410 (28%), Positives = 192/410 (46%), Gaps = 2/410 (0%)

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
           + GF   E   + +V  L +    G+   L++++ + G  P++  YN LI+S  +   L+
Sbjct: 313 EFGFVPSEAAVSNLVDGLRKKGNIGSAFDLVNKVKKFGVAPSLFVYNALINSMCKDGKLD 372

Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
           EA  +F  M   G  P+ VTY  LID   K G LDVA+    KM   G+    + YS +I
Sbjct: 373 EAESLFNNMGHKGLFPNDVTYSILIDSFCKRGKLDVALHFLGKMTEVGIKATVYPYSSLI 432

Query: 473 NCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFE 532
           +   K G L+AA  LF EM+  G  PN+V Y  +I+   K     +A +LY +M   G  
Sbjct: 433 SGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSLISGYCKEGELHNAFRLYHEMTGKGIS 492

Query: 533 PDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEW 592
           P+  T++ ++  L H   + EA  +F EM   N +P+E  Y +L++   K GN  +A+E 
Sbjct: 493 PNTYTFTALISGLCHANRMAEANKLFGEMVEWNVIPNEVTYNVLIEGHCKEGNTVRAFEL 552

Query: 593 YEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL-SCCT 651
            + M++ GL P+  T   L+S     G++S+A   +  +     K +   ++ LL   C 
Sbjct: 553 LDEMVEKGLVPDTYTYRPLISGLCSTGRVSEAREFMNDLQGEQQKLNEMCFSALLHGYCK 612

Query: 652 EARSPYDMGFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRESKRG 711
           E R    +  C E++   G    +   S+   G   Q  R  +   L+ MH +       
Sbjct: 613 EGRLDDALDACREMLG-RGVAMDLVCYSVLIYGILRQQDRRSIIDLLKQMHDQGLRPDNV 671

Query: 712 LVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAVKEKGMSYWLINLHVM 761
           L   ++D   K+G  + A  +W++   +   P+ V    +   L  + +M
Sbjct: 672 LYTTMIDANAKAGNLKMAFGLWDIMVSEGCLPNVVTYTALINGLCKIGLM 721



 Score =  132 bits (331), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 84/274 (30%), Positives = 138/274 (50%), Gaps = 4/274 (1%)

Query: 377 GAINKLLD---QMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTY 433
           G ++  LD   +M+  G   ++V Y+ LI+   R       +D+ KQM   G  PD V Y
Sbjct: 614 GRLDDALDACREMLGRGVAMDLVCYSVLIYGILRQQDRRSIIDLLKQMHDQGLRPDNVLY 673

Query: 434 CTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVN 493
            T+ID +AKAG L +A  ++  M + G  P+  TY+ +IN L K G +  A  L  EM+ 
Sbjct: 674 TTMIDANAKAGNLKMAFGLWDIMVSEGCLPNVVTYTALINGLCKIGLMDKAELLCREMLA 733

Query: 494 QGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDE 553
              +PN  TY   +       N + A++L+ D+   GF  + VTY+I++      G + E
Sbjct: 734 SNSLPNQNTYACFLDYLTSEGNIEKAIQLH-DVLLEGFLANTVTYNILIRGFCKLGRIQE 792

Query: 554 AEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLS 613
           A  V   M      PD   Y  ++  + + G++++A + +E+ML  G+ P+    N L+ 
Sbjct: 793 AAEVLVNMIDSGISPDCISYSTIIYEYCRRGDLKEAIKLWESMLNRGVNPDTVAYNFLIY 852

Query: 614 AFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
                G+L+ A+ L   M+  G+KP+  TY  L+
Sbjct: 853 GCCVTGELTKAFELRDDMMRRGVKPNRATYNSLI 886



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 83/291 (28%), Positives = 148/291 (50%), Gaps = 5/291 (1%)

Query: 359 DEHTYTTMVGILGRARQFGAIN--KLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALD 416
           +E TY  +  I G  ++   +   +LLD+MV  G  P+  TY  LI        ++EA +
Sbjct: 529 NEVTYNVL--IEGHCKEGNTVRAFELLDEMVEKGLVPDTYTYRPLISGLCSTGRVSEARE 586

Query: 417 VFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLG 476
               +Q    + + + +  L+  + K G LD A+D  ++M   G++ D   YSV+I  + 
Sbjct: 587 FMNDLQGEQQKLNEMCFSALLHGYCKEGRLDDALDACREMLGRGVAMDLVCYSVLIYGIL 646

Query: 477 KAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKV 536
           +    ++   L  +M +QG  P+ V Y  MI   AKA N + A  L+  M + G  P+ V
Sbjct: 647 RQQDRRSIIDLLKQMHDQGLRPDNVLYTTMIDANAKAGNLKMAFGLWDIMVSEGCLPNVV 706

Query: 537 TYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAM 596
           TY+ ++  L   G +D+AE +  EM   N +P++  Y   +D     GN+ KA + ++ +
Sbjct: 707 TYTALINGLCKIGLMDKAELLCREMLASNSLPNQNTYACFLDYLTSEGNIEKAIQLHDVL 766

Query: 597 LQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
           L+ G   N  T N L+  F ++G++ +A  +L  M++ G+ P   +Y+ ++
Sbjct: 767 LE-GFLANTVTYNILIRGFCKLGRIQEAAEVLVNMIDSGISPDCISYSTII 816



 Score =  127 bits (318), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 90/330 (27%), Positives = 150/330 (45%), Gaps = 12/330 (3%)

Query: 334 LKQLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQP 393
           L +++   +AL  F+ +   +G + D + YT +V  L   + F    +++ +M   GC  
Sbjct: 190 LIRIRQFRMALHLFDEIV-SSGLRPDVYVYTAVVRSLCELKDFIRAREVIGRMESSGCDL 248

Query: 394 NVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMY 453
           +V TYN  I    +   + EA+++   +   G   D  TYCTL+    K    +   +M 
Sbjct: 249 SVATYNVFIRGLCKNQRVWEAVEIKNLLSYKGLRADVGTYCTLVLGLCKVEEFEAGEEMM 308

Query: 454 KKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKA 513
            +M   G  P     S +++ L K G++ +A  L  ++   G  P+L  YN +I    K 
Sbjct: 309 NEMIEFGFVPSEAAVSNLVDGLRKKGNIGSAFDLVNKVKKFGVAPSLFVYNALINSMCKD 368

Query: 514 RNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVY 573
                A  L+ +M + G  P+ VTYSI+++     G LD A     +M           Y
Sbjct: 369 GKLDEAESLFNNMGHKGLFPNDVTYSILIDSFCKRGKLDVALHFLGKMTEVGIKATVYPY 428

Query: 574 GLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLN 633
             L+    K G +R A   ++ M+  GL+PNV    SL+S + + G+L +A+ L   M  
Sbjct: 429 SSLISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSLISGYCKEGELHNAFRLYHEMTG 488

Query: 634 LGLKPSLQTYTLLLSCCTEARSPYDMGFCH 663
            G+ P+  T+T L+S           G CH
Sbjct: 489 KGISPNTYTFTALIS-----------GLCH 507



 Score =  119 bits (298), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 83/303 (27%), Positives = 139/303 (45%), Gaps = 14/303 (4%)

Query: 365 TMVGILG---RARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQM 421
           T+ G+L    R RQF     L D++V  G +P+V  Y  ++ S         A +V  +M
Sbjct: 182 TLSGVLNGLIRIRQFRMALHLFDEIVSSGLRPDVYVYTAVVRSLCELKDFIRAREVIGRM 241

Query: 422 QVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHL 481
           +  GC+    TY   I    K   +  A+++   +   GL  D  TY  ++  L K    
Sbjct: 242 ESSGCDLSVATYNVFIRGLCKNQRVWEAVEIKNLLSYKGLRADVGTYCTLVLGLCKVEEF 301

Query: 482 QAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIV 541
           +A  ++  EM+  G +P+    + ++    K  N  SA  L   ++  G  P    Y+ +
Sbjct: 302 EAGEEMMNEMIEFGFVPSEAAVSNLVDGLRKKGNIGSAFDLVNKVKKFGVAPSLFVYNAL 361

Query: 542 MEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGL 601
           +  +   G LDEAE++F  M  K   P++  Y +L+D + K G +  A  +   M + G+
Sbjct: 362 INSMCKDGKLDEAESLFNNMGHKGLFPNDVTYSILIDSFCKRGKLDVALHFLGKMTEVGI 421

Query: 602 RPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGF 661
           +  V   +SL+S   ++G+L  A  L   M+  GLKP++  YT L+S           G+
Sbjct: 422 KATVYPYSSLISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSLIS-----------GY 470

Query: 662 CHE 664
           C E
Sbjct: 471 CKE 473



 Score =  117 bits (293), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 78/258 (30%), Positives = 132/258 (51%), Gaps = 1/258 (0%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           G   D   Y+ ++  + R +   +I  LL QM   G +P+ V Y  +I +  +A  L  A
Sbjct: 630 GVAMDLVCYSVLIYGILRQQDRRSIIDLLKQMHDQGLRPDNVLYTTMIDANAKAGNLKMA 689

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
             ++  M   GC P+ VTY  LI+   K G +D A  + ++M A+   P+  TY+  ++ 
Sbjct: 690 FGLWDIMVSEGCLPNVVTYTALINGLCKIGLMDKAELLCREMLASNSLPNQNTYACFLDY 749

Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPD 534
           L   G+++ A QL  +++ +G + N VTYNI+I    K    Q A ++  +M ++G  PD
Sbjct: 750 LTSEGNIEKAIQLH-DVLLEGFLANTVTYNILIRGFCKLGRIQEAAEVLVNMIDSGISPD 808

Query: 535 KVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYE 594
            ++YS ++      G L EA  ++  M  +   PD   Y  L+      G + KA+E  +
Sbjct: 809 CISYSTIIYEYCRRGDLKEAIKLWESMLNRGVNPDTVAYNFLIYGCCVTGELTKAFELRD 868

Query: 595 AMLQAGLRPNVPTCNSLL 612
            M++ G++PN  T NSL+
Sbjct: 869 DMMRRGVKPNRATYNSLI 886



 Score =  114 bits (286), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 105/442 (23%), Positives = 183/442 (41%), Gaps = 23/442 (5%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           G K +   YT+++    +  +     +L  +M   G  PN  T+  LI     AN + EA
Sbjct: 455 GLKPNVVIYTSLISGYCKEGELHNAFRLYHEMTGKGISPNTYTFTALISGLCHANRMAEA 514

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
             +F +M      P+ VTY  LI+ H K G    A ++  +M   GL PDT+TY  +I+ 
Sbjct: 515 NKLFGEMVEWNVIPNEVTYNVLIEGHCKEGNTVRAFELLDEMVEKGLVPDTYTYRPLISG 574

Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPD 534
           L   G +  A +   ++  +    N + ++ ++    K      AL   R+M   G   D
Sbjct: 575 LCSTGRVSEAREFMNDLQGEQQKLNEMCFSALLHGYCKEGRLDDALDACREMLGRGVAMD 634

Query: 535 KVTYSIVMEVLGHCGYLDEAEA-----VFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKA 589
            V YS+++      G L + +      +  +M  +   PD  +Y  ++D   KAGN++ A
Sbjct: 635 LVCYSVLIY-----GILRQQDRRSIIDLLKQMHDQGLRPDNVLYTTMIDANAKAGNLKMA 689

Query: 590 WEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSC 649
           +  ++ M+  G  PNV T  +L++   ++G +  A  L + ML     P+  TY   L  
Sbjct: 690 FGLWDIMVSEGCLPNVVTYTALINGLCKIGLMDKAELLCREMLASNSLPNQNTYACFLDY 749

Query: 650 CTEARSPYDMGFCHELMAVSGHPAHMFLLSMPSPG-PDGQNVRDHVGSFLEMMHSEDRES 708
            T   +       H+++ + G  A+    ++   G      +++     + M+ S     
Sbjct: 750 LTSEGNIEKAIQLHDVL-LEGFLANTVTYNILIRGFCKLGRIQEAAEVLVNMIDSGISPD 808

Query: 709 KRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAVKEKGMSYWLINLHVMSDGTAVI 768
                  + ++  +  LK EA  +WE    + V PD V    + Y          G  V 
Sbjct: 809 CISYSTIIYEYCRRGDLK-EAIKLWESMLNRGVNPDTVAYNFLIY----------GCCVT 857

Query: 769 ALSRTLAWFRKQMLISGVGPSR 790
                    R  M+  GV P+R
Sbjct: 858 GELTKAFELRDDMMRRGVKPNR 879



 Score = 97.4 bits (241), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 84/367 (22%), Positives = 160/367 (43%), Gaps = 25/367 (6%)

Query: 324 SMDAYQANQVLKQ-LQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQF------ 376
           ++  +   +VL Q L D  +AL FFN+L     F H   ++  ++  L ++  +      
Sbjct: 56  TLKPHHVEKVLIQTLDDSRLALRFFNFLGLHKNFDHSTTSFCILIHALVQSNLYWPASSL 115

Query: 377 ------------GAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVV 424
                       G     LD   R       + ++ LI +Y +     + L V + M   
Sbjct: 116 LQTLLLRGLNPEGLFESFLDSY-RKCNFSTTLGFDLLIQTYVQNRRELDGLVVVRLMMDC 174

Query: 425 GCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAA 484
           G  P   T   +++   +     +A+ ++ ++ ++GL PD + Y+ ++  L +      A
Sbjct: 175 GILPQIRTLSGVLNGLIRIRQFRMALHLFDEIVSSGLRPDVYVYTAVVRSLCELKDFIRA 234

Query: 485 HQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEV 544
            ++   M + GC  ++ TYN+ I    K +    A+++   +   G   D  TY  +  V
Sbjct: 235 REVIGRMESSGCDLSVATYNVFIRGLCKNQRVWEAVEIKNLLSYKGLRADVGTYCTL--V 292

Query: 545 LGHCGY--LDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLR 602
           LG C     +  E +  EM    +VP E     LVD   K GN+  A++    + + G+ 
Sbjct: 293 LGLCKVEEFEAGEEMMNEMIEFGFVPSEAAVSNLVDGLRKKGNIGSAFDLVNKVKKFGVA 352

Query: 603 PNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL-SCCTEARSPYDMGF 661
           P++   N+L+++  + G+L +A  L   M + GL P+  TY++L+ S C   +    + F
Sbjct: 353 PSLFVYNALINSMCKDGKLDEAESLFNNMGHKGLFPNDVTYSILIDSFCKRGKLDVALHF 412

Query: 662 CHELMAV 668
             ++  V
Sbjct: 413 LGKMTEV 419



 Score = 53.5 bits (127), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 37/139 (26%), Positives = 63/139 (45%), Gaps = 9/139 (6%)

Query: 335 KQLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPN 394
           K +Q H V L          GF  +  TY  ++    +  +     ++L  M+  G  P+
Sbjct: 758 KAIQLHDVLL---------EGFLANTVTYNILIRGFCKLGRIQEAAEVLVNMIDSGISPD 808

Query: 395 VVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYK 454
            ++Y+ +I+ Y R   L EA+ +++ M   G  PD V Y  LI      G L  A ++  
Sbjct: 809 CISYSTIIYEYCRRGDLKEAIKLWESMLNRGVNPDTVAYNFLIYGCCVTGELTKAFELRD 868

Query: 455 KMQAAGLSPDTFTYSVIIN 473
            M   G+ P+  TY+ +I+
Sbjct: 869 DMMRRGVKPNRATYNSLIH 887


>gi|297791025|ref|XP_002863397.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297309232|gb|EFH39656.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 711

 Score =  171 bits (433), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 132/558 (23%), Positives = 243/558 (43%), Gaps = 62/558 (11%)

Query: 333 VLKQLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQ 392
           VL  L++      FFNW++ +  F  +   Y   +  L   RQF  I ++  +MV+DG +
Sbjct: 159 VLNSLREWQKTHTFFNWVKSKNLFPMETIFYNVTMKSLRFGRQFYLIEEMALEMVKDGVE 218

Query: 393 PNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDM 452
            + +TY+ +I    R N+ ++A++ F++M   G  PD VTY  ++D+++K   ++  + +
Sbjct: 219 LDNITYSTIITCAKRCNFYDKAIEWFERMYKTGLMPDEVTYSAILDVYSKLRKVEEVLSL 278

Query: 453 YKKMQAAGLSPDTFTYSVI-----------------------------------INCLGK 477
           Y++  A G  PD   +SV+                                   +  +G+
Sbjct: 279 YERAVATGWKPDAIAFSVLGKMFGEAGDYDGIRYVLQEMKSMDVKPNVVVYNTLLEAMGR 338

Query: 478 AGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVT 537
           AG    A  LF EM+  G  PN  T   ++ +  KAR  + AL+L+ +M+   +  D + 
Sbjct: 339 AGKPGLARSLFNEMLEAGLTPNEKTLTALVKIYGKARWAKDALQLWEEMKAKKWPMDFIL 398

Query: 538 YSIVMEVLGHCGYLDEAEAVFAEMRRK-NWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAM 596
           Y+ ++ +    G  +EAE +F +M+      PD   Y  +++++G  G   KA + +E M
Sbjct: 399 YNTLLNMCADIGLEEEAERLFNDMKESVQCKPDNFSYTAMLNIYGSGGKAEKAMKLFEEM 458

Query: 597 LQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSP 656
           L+AG++ NV  C  L+    +  ++ D  ++    +  G+KP  +    LLS      S 
Sbjct: 459 LEAGVQVNVMGCTCLVQCLGKAKRIDDLVYVFDLSIQRGVKPDDRLCGCLLSVMALCESS 518

Query: 657 YDMGFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRESKRGLVDAV 716
            D       +  +      F+  +     + + V++    F  ++++   E++R   + +
Sbjct: 519 EDAEKVMACLERANRKLVTFVNLIVDEKTEFETVKEE---FKLVINATQVEARRPFCNCL 575

Query: 717 VDFLHKSGLKEEAGSVWEVAAQKNVYPDAVKEKGMSYWLINLHVMSDGTAVIALS---RT 773
           +D        E A  +  +     +YP  +  K +  W +++  +S G A  AL    RT
Sbjct: 576 IDICRGKKRHERAHELLYLGTLFGLYP-GLHNKTIKEWSLDVRSLSVGAAETALEEWMRT 634

Query: 774 LAWFRK------QMLISGVGPSRIDIVTGWGRRSRVTGTSLVRQAVQELLHMFSFPFFTE 827
           LA   K      ++ ++  G       TG  R S+    S         L   S P F +
Sbjct: 635 LANIIKRQEDLPELFLAQTG-------TGTHRFSQGLANSFALH-----LQQLSAP-FRQ 681

Query: 828 NGNSGCFVGCGEPLNKWL 845
           +  +G FV   E L  WL
Sbjct: 682 SDRAGIFVATKEDLVSWL 699



 Score = 46.2 bits (108), Expect = 0.075,   Method: Compositional matrix adjust.
 Identities = 41/164 (25%), Positives = 69/164 (42%), Gaps = 14/164 (8%)

Query: 280 IPAGLAPFSRHFASTGNVVESVSRILRQWKWGPLAE---EALGNTNYSMDAYQANQVLKQ 336
           + AGL P  +        + ++ +I  + +W   A    E +    + MD    N +L  
Sbjct: 353 LEAGLTPNEK-------TLTALVKIYGKARWAKDALQLWEEMKAKKWPMDFILYNTLLNM 405

Query: 337 LQD---HTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQP 393
             D      A   FN ++     K D  +YT M+ I G   +     KL ++M+  G Q 
Sbjct: 406 CADIGLEEEAERLFNDMKESVQCKPDNFSYTAMLNIYGSGGKAEKAMKLFEEMLEAGVQV 465

Query: 394 NVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEP-DRVTYCTL 436
           NV+    L+   G+A  +++ + VF      G +P DR+  C L
Sbjct: 466 NVMGCTCLVQCLGKAKRIDDLVYVFDLSIQRGVKPDDRLCGCLL 509


>gi|357521289|ref|XP_003630933.1| Tau class glutathione S-transferase [Medicago truncatula]
 gi|355524955|gb|AET05409.1| Tau class glutathione S-transferase [Medicago truncatula]
          Length = 1320

 Score =  171 bits (432), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 98/320 (30%), Positives = 162/320 (50%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           R+ G   D   YTT++    +     A  KL D+M R    P++VTY  +IH   ++  +
Sbjct: 339 RKWGVFPDNVVYTTVISGFCKLGNVSAACKLFDEMRRKKIVPDIVTYTSVIHGICKSGKM 398

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
            EA ++F +M V G EPD VTY  LID + KAG +  A  ++ +M   GL+P+  TY+ +
Sbjct: 399 VEAREMFNEMLVKGLEPDEVTYTALIDGYCKAGEMKEAFSVHNQMVQKGLTPNVVTYTAL 458

Query: 472 INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF 531
            + L K G +  A++L  EM  +G  PN+ TYN ++    K  N +  +KL  +M  AGF
Sbjct: 459 ADGLCKNGEIDVANELLHEMSRKGLQPNVYTYNTIVNGLCKIGNIEQTVKLMEEMDLAGF 518

Query: 532 EPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWE 591
            PD +TY+ +M+     G + +A  +   M  K   P    + +L++ +  +G +     
Sbjct: 519 YPDTITYTTLMDAYCKMGEMAKAHELLRIMLNKRLQPTLVTFNVLMNGFCMSGMLEDGER 578

Query: 592 WYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCT 651
             E ML+ G+ PN  T NSL+  +     +     + + M + G+ P   TY +L+    
Sbjct: 579 LIEWMLEKGIMPNATTFNSLMKQYCIKNNMRATTEIYKAMHDRGVMPDSNTYNILIKGHC 638

Query: 652 EARSPYDMGFCHELMAVSGH 671
           +AR+  +  F H+ M   G+
Sbjct: 639 KARNMKEAWFLHKEMVEKGY 658



 Score =  145 bits (366), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 88/300 (29%), Positives = 152/300 (50%), Gaps = 11/300 (3%)

Query: 372 RARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRV 431
           R  +   + KL+D++   G +P+   YN +I    +   + EA  + + M+  G  PD V
Sbjct: 289 RIGELDKVLKLVDELKGKGLKPDEYIYNNIILLLCKNGEVVEAEQLLRGMRKWGVFPDNV 348

Query: 432 TYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEM 491
            Y T+I    K G +  A  ++ +M+   + PD  TY+ +I+ + K+G +  A ++F EM
Sbjct: 349 VYTTVISGFCKLGNVSAACKLFDEMRRKKIVPDIVTYTSVIHGICKSGKMVEAREMFNEM 408

Query: 492 VNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYL 551
           + +G  P+ VTY  +I    KA   + A  ++  M   G  P+ VTY+ + + L   G +
Sbjct: 409 LVKGLEPDEVTYTALIDGYCKAGEMKEAFSVHNQMVQKGLTPNVVTYTALADGLCKNGEI 468

Query: 552 DEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSL 611
           D A  +  EM RK   P+   Y  +V+   K GN+ +  +  E M  AG  P+  T  +L
Sbjct: 469 DVANELLHEMSRKGLQPNVYTYNTIVNGLCKIGNIEQTVKLMEEMDLAGFYPDTITYTTL 528

Query: 612 LSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGFCHELMAVSGH 671
           + A+ ++G+++ A+ LL+ MLN  L+P+L T+ +L++           GFC   M   G 
Sbjct: 529 MDAYCKMGEMAKAHELLRIMLNKRLQPTLVTFNVLMN-----------GFCMSGMLEDGE 577



 Score =  142 bits (359), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 98/353 (27%), Positives = 168/353 (47%), Gaps = 9/353 (2%)

Query: 295 GNVVESVSRILRQWKWGPLAEEALGNTNYSMDAYQANQVLKQLQDHTVALGFFNWLRRQA 354
           G VVE+   +    KWG   +  +  T  S           +L + + A   F+ +RR+ 
Sbjct: 326 GEVVEAEQLLRGMRKWGVFPDNVVYTTVISG--------FCKLGNVSAACKLFDEMRRKK 377

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
               D  TYT+++  + ++ +     ++ ++M+  G +P+ VTY  LI  Y +A  + EA
Sbjct: 378 -IVPDIVTYTSVIHGICKSGKMVEAREMFNEMLVKGLEPDEVTYTALIDGYCKAGEMKEA 436

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
             V  QM   G  P+ VTY  L D   K G +DVA ++  +M   GL P+ +TY+ I+N 
Sbjct: 437 FSVHNQMVQKGLTPNVVTYTALADGLCKNGEIDVANELLHEMSRKGLQPNVYTYNTIVNG 496

Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPD 534
           L K G+++   +L  EM   G  P+ +TY  ++    K      A +L R M N   +P 
Sbjct: 497 LCKIGNIEQTVKLMEEMDLAGFYPDTITYTTLMDAYCKMGEMAKAHELLRIMLNKRLQPT 556

Query: 535 KVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYE 594
            VT++++M      G L++ E +   M  K  +P+   +  L+  +    N+R   E Y+
Sbjct: 557 LVTFNVLMNGFCMSGMLEDGERLIEWMLEKGIMPNATTFNSLMKQYCIKNNMRATTEIYK 616

Query: 595 AMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
           AM   G+ P+  T N L+    +   + +A+ L + M+  G   +  TY  L+
Sbjct: 617 AMHDRGVMPDSNTYNILIKGHCKARNMKEAWFLHKEMVEKGYSVTAATYDALI 669



 Score =  133 bits (334), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 101/367 (27%), Positives = 175/367 (47%), Gaps = 4/367 (1%)

Query: 381 KLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIH 440
           K+ ++    G   N V+ N ++H   +   + EA ++  QM   G  PD V+Y  ++  +
Sbjct: 228 KVFEEFPELGVCWNTVSCNIVLHCLCQLGKVREAHNLLVQMTDRGNFPDVVSYGVVVSGY 287

Query: 441 AKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNL 500
            + G LD  + +  +++  GL PD + Y+ II  L K G +  A QL   M   G  P+ 
Sbjct: 288 CRIGELDKVLKLVDELKGKGLKPDEYIYNNIILLLCKNGEVVEAEQLLRGMRKWGVFPDN 347

Query: 501 VTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAE 560
           V Y  +I+   K  N  +A KL+ +M+     PD VTY+ V+  +   G + EA  +F E
Sbjct: 348 VVYTTVISGFCKLGNVSAACKLFDEMRRKKIVPDIVTYTSVIHGICKSGKMVEAREMFNE 407

Query: 561 MRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQ 620
           M  K   PDE  Y  L+D + KAG +++A+  +  M+Q GL PNV T  +L     + G+
Sbjct: 408 MLVKGLEPDEVTYTALIDGYCKAGEMKEAFSVHNQMVQKGLTPNVVTYTALADGLCKNGE 467

Query: 621 LSDAYHLLQGMLNLGLKPSLQTY-TLLLSCCTEARSPYDMGFCHELMAVSGHPAHM-FLL 678
           +  A  LL  M   GL+P++ TY T++   C        +    E+     +P  + +  
Sbjct: 468 IDVANELLHEMSRKGLQPNVYTYNTIVNGLCKIGNIEQTVKLMEEMDLAGFYPDTITYTT 527

Query: 679 SMPSPGPDGQNVRDHVGSFLEMMHSEDRESKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQ 738
            M +    G+  + H    L +M ++  +      + +++    SG+ E+   + E   +
Sbjct: 528 LMDAYCKMGEMAKAH--ELLRIMLNKRLQPTLVTFNVLMNGFCMSGMLEDGERLIEWMLE 585

Query: 739 KNVYPDA 745
           K + P+A
Sbjct: 586 KGIMPNA 592



 Score =  125 bits (314), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 90/301 (29%), Positives = 155/301 (51%), Gaps = 10/301 (3%)

Query: 370 LGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPD 429
           LG+ R+    + LL QM   G  P+VV+Y  ++  Y R   L++ L +  +++  G +PD
Sbjct: 255 LGKVRE---AHNLLVQMTDRGNFPDVVSYGVVVSGYCRIGELDKVLKLVDELKGKGLKPD 311

Query: 430 RVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFC 489
              Y  +I +  K G +  A  + + M+  G+ PD   Y+ +I+   K G++ AA +LF 
Sbjct: 312 EYIYNNIILLLCKNGEVVEAEQLLRGMRKWGVFPDNVVYTTVISGFCKLGNVSAACKLFD 371

Query: 490 EMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHC- 548
           EM  +  +P++VTY  +I    K+     A +++ +M   G EPD+VTY+ +++  G+C 
Sbjct: 372 EMRRKKIVPDIVTYTSVIHGICKSGKMVEAREMFNEMLVKGLEPDEVTYTALID--GYCK 429

Query: 549 -GYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPT 607
            G + EA +V  +M +K   P+   Y  L D   K G +  A E    M + GL+PNV T
Sbjct: 430 AGEMKEAFSVHNQMVQKGLTPNVVTYTALADGLCKNGEIDVANELLHEMSRKGLQPNVYT 489

Query: 608 CNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGFCHELMA 667
            N++++   ++G +     L++ M   G  P   TYT L+    +     +M   HEL+ 
Sbjct: 490 YNTIVNGLCKIGNIEQTVKLMEEMDLAGFYPDTITYTTLMDAYCKMG---EMAKAHELLR 546

Query: 668 V 668
           +
Sbjct: 547 I 547



 Score =  124 bits (312), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 78/316 (24%), Positives = 142/316 (44%), Gaps = 36/316 (11%)

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
           Q G   +  TYT +   L +  +    N+LL +M R G QPNV TYN +++   +   + 
Sbjct: 445 QKGLTPNVVTYTALADGLCKNGEIDVANELLHEMSRKGLQPNVYTYNTIVNGLCKIGNIE 504

Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
           + + + ++M + G  PD +TY TL+D + K G +  A ++ + M    L P   T++V++
Sbjct: 505 QTVKLMEEMDLAGFYPDTITYTTLMDAYCKMGEMAKAHELLRIMLNKRLQPTLVTFNVLM 564

Query: 473 NCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFE 532
           N    +G L+   +L   M+ +G +PN  T+N ++       N ++  ++Y+ M + G  
Sbjct: 565 NGFCMSGMLEDGERLIEWMLEKGIMPNATTFNSLMKQYCIKNNMRATTEIYKAMHDRGVM 624

Query: 533 PDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEW 592
           PD  TY+I+++  GHC                                 KA N+++AW  
Sbjct: 625 PDSNTYNILIK--GHC---------------------------------KARNMKEAWFL 649

Query: 593 YEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSC-CT 651
           ++ M++ G      T ++L+  F +  +  +A  L + M   GL      Y + +     
Sbjct: 650 HKEMVEKGYSVTAATYDALIRGFYKRKKFVEARKLFEEMRKHGLVAEKDIYDIFVDVNYE 709

Query: 652 EARSPYDMGFCHELMA 667
           E      +  C E M 
Sbjct: 710 EGNWEITLELCDEFMT 725



 Score = 99.8 bits (247), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 69/301 (22%), Positives = 143/301 (47%)

Query: 446 LDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNI 505
           + +A+ ++++    G+  +T + +++++CL + G ++ AH L  +M ++G  P++V+Y +
Sbjct: 223 IKIAVKVFEEFPELGVCWNTVSCNIVLHCLCQLGKVREAHNLLVQMTDRGNFPDVVSYGV 282

Query: 506 MIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKN 565
           +++   +       LKL  +++  G +PD+  Y+ ++ +L   G + EAE +   MR+  
Sbjct: 283 VVSGYCRIGELDKVLKLVDELKGKGLKPDEYIYNNIILLLCKNGEVVEAEQLLRGMRKWG 342

Query: 566 WVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAY 625
             PD  VY  ++  + K GNV  A + ++ M +  + P++ T  S++    + G++ +A 
Sbjct: 343 VFPDNVVYTTVISGFCKLGNVSAACKLFDEMRRKKIVPDIVTYTSVIHGICKSGKMVEAR 402

Query: 626 HLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGFCHELMAVSGHPAHMFLLSMPSPGP 685
            +   ML  GL+P   TYT L+    +A    +    H  M   G   ++   +  + G 
Sbjct: 403 EMFNEMLVKGLEPDEVTYTALIDGYCKAGEMKEAFSVHNQMVQKGLTPNVVTYTALADGL 462

Query: 686 DGQNVRDHVGSFLEMMHSEDRESKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDA 745
                 D     L  M  +  +      + +V+ L K G  E+   + E       YPD 
Sbjct: 463 CKNGEIDVANELLHEMSRKGLQPNVYTYNTIVNGLCKIGNIEQTVKLMEEMDLAGFYPDT 522

Query: 746 V 746
           +
Sbjct: 523 I 523



 Score = 95.5 bits (236), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 76/268 (28%), Positives = 131/268 (48%), Gaps = 3/268 (1%)

Query: 381 KLLDQMVRDGCQPNVVTYNRLIHSYGRANY--LNEALDVFKQMQVVGCEPDRVTYCTLID 438
           KL  +++R G   +V + N L  S    N+  +  A+ VF++   +G   + V+   ++ 
Sbjct: 192 KLFHKLLRYGVVVSVDSCN-LFLSRLSCNFEGIKIAVKVFEEFPELGVCWNTVSCNIVLH 250

Query: 439 IHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIP 498
              + G +  A ++  +M   G  PD  +Y V+++   + G L    +L  E+  +G  P
Sbjct: 251 CLCQLGKVREAHNLLVQMTDRGNFPDVVSYGVVVSGYCRIGELDKVLKLVDELKGKGLKP 310

Query: 499 NLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVF 558
           +   YN +I L  K      A +L R M+  G  PD V Y+ V+      G +  A  +F
Sbjct: 311 DEYIYNNIILLLCKNGEVVEAEQLLRGMRKWGVFPDNVVYTTVISGFCKLGNVSAACKLF 370

Query: 559 AEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRV 618
            EMRRK  VPD   Y  ++    K+G + +A E +  ML  GL P+  T  +L+  + + 
Sbjct: 371 DEMRRKKIVPDIVTYTSVIHGICKSGKMVEAREMFNEMLVKGLEPDEVTYTALIDGYCKA 430

Query: 619 GQLSDAYHLLQGMLNLGLKPSLQTYTLL 646
           G++ +A+ +   M+  GL P++ TYT L
Sbjct: 431 GEMKEAFSVHNQMVQKGLTPNVVTYTAL 458


>gi|356528166|ref|XP_003532676.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At2g02150-like [Glycine max]
          Length = 852

 Score =  171 bits (432), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 110/356 (30%), Positives = 176/356 (49%), Gaps = 39/356 (10%)

Query: 330 ANQVLKQLQDHT---VALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQM 386
            N++L +L   +   +AL FF  +   AG      TY  ++G L R     A   L ++M
Sbjct: 219 CNELLHRLSKSSKGGLALSFFKDMV-VAGLSPSVFTYNMVIGCLAREGDLEAARSLFEEM 277

Query: 387 VRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFL 446
              G +P++VTYN LI  YG+   L  A+ VF++M+  GCEPD +TY +LI+   K   +
Sbjct: 278 KAKGLRPDIVTYNSLIDGYGKVGMLTGAVSVFEEMKDAGCEPDVITYNSLINCFCKFERI 337

Query: 447 DVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIM 506
             A +    M+  GL P+  TYS +I+   KAG L  A++ F +M+  G  PN  TY  +
Sbjct: 338 PQAFEYLHGMKQRGLQPNVVTYSTLIDAFCKAGMLLEANKFFVDMIRVGLQPNEFTYTSL 397

Query: 507 IALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNW 566
           I    K  +   A KL  +MQ AG   + VTY+ +++ L   G + EAE +F  + +  W
Sbjct: 398 IDANCKIGDLNEAFKLESEMQQAGVNLNIVTYTALLDGLCEDGRMREAEELFGALLKAGW 457

Query: 567 VPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNV--------------------- 605
             ++ +Y  L   + KA  + KA +  E M +  L+P++                     
Sbjct: 458 TLNQQIYTSLFHGYIKAKMMEKAMDILEEMNKKNLKPDLLLYGTKIWGLCRQNEIEDSMA 517

Query: 606 ---------PTCNS-----LLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
                     T NS     L+ A+ +VG+ ++A +LLQ M +LG+K ++ TY +L+
Sbjct: 518 VIREMMDCGLTANSYIYTTLIDAYFKVGKTTEAVNLLQEMQDLGIKITVVTYGVLI 573



 Score =  150 bits (378), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 125/453 (27%), Positives = 200/453 (44%), Gaps = 27/453 (5%)

Query: 346 FFN--WLRRQA---GFKHDEHTYTTMV--GILGRARQ-FGAINKLLDQMVRDGCQPNVVT 397
           FF+  W  R     GF   +  +  +V  G+L  ARQ F  +NK           P V +
Sbjct: 166 FFDMLWSTRNVCRPGFGVFDTLFNVLVDLGMLEEARQCFWKMNKF-------RVLPKVRS 218

Query: 398 YNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQ 457
            N L+H   +++    AL  FK M V G  P   TY  +I   A+ G L+ A  ++++M+
Sbjct: 219 CNELLHRLSKSSKGGLALSFFKDMVVAGLSPSVFTYNMVIGCLAREGDLEAARSLFEEMK 278

Query: 458 AAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQ 517
           A GL PD  TY+ +I+  GK G L  A  +F EM + GC P+++TYN +I    K     
Sbjct: 279 AKGLRPDIVTYNSLIDGYGKVGMLTGAVSVFEEMKDAGCEPDVITYNSLINCFCKFERIP 338

Query: 518 SALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLV 577
            A +    M+  G +P+ VTYS +++     G L EA   F +M R    P+E  Y  L+
Sbjct: 339 QAFEYLHGMKQRGLQPNVVTYSTLIDAFCKAGMLLEANKFFVDMIRVGLQPNEFTYTSLI 398

Query: 578 DLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLK 637
           D   K G++ +A++    M QAG+  N+ T  +LL      G++ +A  L   +L  G  
Sbjct: 399 DANCKIGDLNEAFKLESEMQQAGVNLNIVTYTALLDGLCEDGRMREAEELFGALLKAGWT 458

Query: 638 PSLQTYTLLLSCCTEARSPYDMGFCHELMAVSGHPAHMFLLSMPSPGPDGQN-VRDHVGS 696
            + Q YT L     +A+         E M        + L      G   QN + D +  
Sbjct: 459 LNQQIYTSLFHGYIKAKMMEKAMDILEEMNKKNLKPDLLLYGTKIWGLCRQNEIEDSMAV 518

Query: 697 FLEMMHSEDRESKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAVKEKGMSYWLI 756
             EMM      +   +   ++D   K G   EA ++ +           +++ G+   ++
Sbjct: 519 IREMMDC-GLTANSYIYTTLIDAYFKVGKTTEAVNLLQ----------EMQDLGIKITVV 567

Query: 757 NLHVMSDGTAVIALSRTLAWFRKQMLISGVGPS 789
              V+ DG   I L +    +   M  +G+ P+
Sbjct: 568 TYGVLIDGLCKIGLVQQAVRYFDHMTRNGLQPN 600



 Score =  134 bits (336), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 84/313 (26%), Positives = 150/313 (47%), Gaps = 6/313 (1%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           + AG + D  TY +++    +  +     + L  M + G QPNVVTY+ LI ++ +A  L
Sbjct: 313 KDAGCEPDVITYNSLINCFCKFERIPQAFEYLHGMKQRGLQPNVVTYSTLIDAFCKAGML 372

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
            EA   F  M  VG +P+  TY +LID + K G L+ A  +  +MQ AG++ +  TY+ +
Sbjct: 373 LEANKFFVDMIRVGLQPNEFTYTSLIDANCKIGDLNEAFKLESEMQQAGVNLNIVTYTAL 432

Query: 472 INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF 531
           ++ L + G ++ A +LF  ++  G   N   Y  +     KA+  + A+ +  +M     
Sbjct: 433 LDGLCEDGRMREAEELFGALLKAGWTLNQQIYTSLFHGYIKAKMMEKAMDILEEMNKKNL 492

Query: 532 EPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWE 591
           +PD + Y   +  L     ++++ AV  EM       +  +Y  L+D + K G   +A  
Sbjct: 493 KPDLLLYGTKIWGLCRQNEIEDSMAVIREMMDCGLTANSYIYTTLIDAYFKVGKTTEAVN 552

Query: 592 WYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL---- 647
             + M   G++  V T   L+    ++G +  A      M   GL+P++  YT L+    
Sbjct: 553 LLQEMQDLGIKITVVTYGVLIDGLCKIGLVQQAVRYFDHMTRNGLQPNIMIYTALIDGLC 612

Query: 648 --SCCTEARSPYD 658
              C  EA++ ++
Sbjct: 613 KNDCLEEAKNLFN 625



 Score =  122 bits (307), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 89/328 (27%), Positives = 156/328 (47%), Gaps = 6/328 (1%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           +QAG   +  TYT ++  L    +     +L   +++ G   N   Y  L H Y +A  +
Sbjct: 418 QQAGVNLNIVTYTALLDGLCEDGRMREAEELFGALLKAGWTLNQQIYTSLFHGYIKAKMM 477

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
            +A+D+ ++M     +PD + Y T I    +   ++ +M + ++M   GL+ +++ Y+ +
Sbjct: 478 EKAMDILEEMNKKNLKPDLLLYGTKIWGLCRQNEIEDSMAVIREMMDCGLTANSYIYTTL 537

Query: 472 INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF 531
           I+   K G    A  L  EM + G    +VTY ++I    K    Q A++ +  M   G 
Sbjct: 538 IDAYFKVGKTTEAVNLLQEMQDLGIKITVVTYGVLIDGLCKIGLVQQAVRYFDHMTRNGL 597

Query: 532 EPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWE 591
           +P+ + Y+ +++ L     L+EA+ +F EM  K   PD+ VY  L+D   K GN  +A  
Sbjct: 598 QPNIMIYTALIDGLCKNDCLEEAKNLFNEMLDKGISPDKLVYTSLIDGNMKHGNPGEALS 657

Query: 592 WYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCT 651
               M++ G+  ++    SL+  F R GQ+  A  LL  ML  G+ P        + C  
Sbjct: 658 LRNRMVEIGMELDLCAYTSLIWGFSRYGQVQLAKSLLDEMLRKGIIPD------QVLCIC 711

Query: 652 EARSPYDMGFCHELMAVSGHPAHMFLLS 679
             R  Y++G  +E +A+    A   L+S
Sbjct: 712 LLRKYYELGDINEALALHDDMARRGLIS 739


>gi|302794977|ref|XP_002979252.1| hypothetical protein SELMODRAFT_110457 [Selaginella moellendorffii]
 gi|300153020|gb|EFJ19660.1| hypothetical protein SELMODRAFT_110457 [Selaginella moellendorffii]
          Length = 702

 Score =  171 bits (432), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 136/525 (25%), Positives = 226/525 (43%), Gaps = 79/525 (15%)

Query: 294 TGNVVESVSRILRQWKWGPLAEEALGNTNYSMDAYQANQVLKQLQDHTVALGFFNWLRRQ 353
           T +V E +  IL   K GP     L     ++    A +VL+Q++D  VA  FF W   +
Sbjct: 13  TQDVAEILLGIL---KPGPYLCRDLAGYASTVTPEVAGRVLQQVEDPDVAWTFFQWAGNK 69

Query: 354 AGFKHDEHT-----------------------------------YTTMVGILGRARQFGA 378
            GF+H+ +T                                   YTT++    +A Q   
Sbjct: 70  PGFQHNAYTCAVLLNAFVKAKRHEEAHRLLKEELEPLCFPNEIMYTTVINGFCKAGQVDQ 129

Query: 379 INKLLDQMVRDG----------------------------------CQPNVVTYNRLIHS 404
             +LLD+M   G                                  C PNV+TYN +++ 
Sbjct: 130 AFELLDEMKERGVKMDVLLHSTLIQGLCRKGRIDEALEQFKSMGEECSPNVITYNTVVNG 189

Query: 405 YGRANYLNEALDVFKQMQVV-----GCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAA 459
             +AN ++EAL++F  M+       GCEPD ++Y T+ID   KA  +D A + +K+M+A 
Sbjct: 190 LCKANRIDEALELFDDMEKRYEASHGCEPDVISYSTVIDALCKAQRVDKAYEYFKRMRAV 249

Query: 460 GLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSA 519
           G +P+  TYS +I+ L K        +L   M  +G   N++ +N M+    K    + A
Sbjct: 250 GCAPNVVTYSSLIDGLCKVDRPSECLELLLHMKEKGFGINIIDFNAMLHALWKNDEQEKA 309

Query: 520 LKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDL 579
            + +  +  +G +P+ VTY++ +  L   G +DEA  +  EM      PD   Y  ++D 
Sbjct: 310 CQFFERLLKSGKKPNVVTYNVAVHGLCKAGRVDEAYRILLEMVESKVTPDVITYSSIIDG 369

Query: 580 WGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPS 639
           + KAG + KA + +  M+     P+  T  +LL  F    +  +A+ + + M+N G  P 
Sbjct: 370 FCKAGRMDKADDVFTRMMVHECIPHPVTFMTLLHGFSEHKKSREAFRVHEDMVNAGFIPG 429

Query: 640 LQTYTLLLSCCTEARSPYD-MGFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFL 698
           LQTY +L+ C   A S    +   H++      P       +       + V D    FL
Sbjct: 430 LQTYNVLMDCVCGADSVESALEIYHKMKRKKRQPDCNTYAPLIQCLCRARRV-DEAKEFL 488

Query: 699 EMMHSEDRESKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYP 743
           ++M +++      +  A+V+ L K G  +EA SV +   +    P
Sbjct: 489 DVMEADNVVPNGAICHALVEVLCKQGEVDEACSVLDNVVEVGCQP 533



 Score =  135 bits (341), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 78/297 (26%), Positives = 155/297 (52%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           R  G   +  TY++++  L +  +     +LL  M   G   N++ +N ++H+  + +  
Sbjct: 247 RAVGCAPNVVTYSSLIDGLCKVDRPSECLELLLHMKEKGFGINIIDFNAMLHALWKNDEQ 306

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
            +A   F+++   G +P+ VTY   +    KAG +D A  +  +M  + ++PD  TYS I
Sbjct: 307 EKACQFFERLLKSGKKPNVVTYNVAVHGLCKAGRVDEAYRILLEMVESKVTPDVITYSSI 366

Query: 472 INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF 531
           I+   KAG +  A  +F  M+   CIP+ VT+  ++   ++ +  + A +++ DM NAGF
Sbjct: 367 IDGFCKAGRMDKADDVFTRMMVHECIPHPVTFMTLLHGFSEHKKSREAFRVHEDMVNAGF 426

Query: 532 EPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWE 591
            P   TY+++M+ +     ++ A  ++ +M+RK   PD   Y  L+    +A  V +A E
Sbjct: 427 IPGLQTYNVLMDCVCGADSVESALEIYHKMKRKKRQPDCNTYAPLIQCLCRARRVDEAKE 486

Query: 592 WYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
           + + M    + PN   C++L+    + G++ +A  +L  ++ +G +P  +T+ +L+ 
Sbjct: 487 FLDVMEADNVVPNGAICHALVEVLCKQGEVDEACSVLDNVVEVGCQPLGETFKILVE 543



 Score =  107 bits (267), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 78/290 (26%), Positives = 133/290 (45%), Gaps = 5/290 (1%)

Query: 359 DEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVF 418
           D  TY++++    +A +    + +  +M+   C P+ VT+  L+H +       EA  V 
Sbjct: 359 DVITYSSIIDGFCKAGRMDKADDVFTRMMVHECIPHPVTFMTLLHGFSEHKKSREAFRVH 418

Query: 419 KQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKA 478
           + M   G  P   TY  L+D    A  ++ A+++Y KM+     PD  TY+ +I CL +A
Sbjct: 419 EDMVNAGFIPGLQTYNVLMDCVCGADSVESALEIYHKMKRKKRQPDCNTYAPLIQCLCRA 478

Query: 479 GHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTY 538
             +  A +    M     +PN    + ++ +  K      A  +  ++   G +P   T+
Sbjct: 479 RRVDEAKEFLDVMEADNVVPNGAICHALVEVLCKQGEVDEACSVLDNVVEVGCQPLGETF 538

Query: 539 SIVMEVLGHCGYLDEA-EAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAML 597
            I++E L    YL +  EA    +R   +V D   Y L V    KAG   +A E  E M+
Sbjct: 539 KILVEEL----YLRKKWEAASKLLRSPGFVADAATYSLCVAEICKAGKPDEAVEVIEQMV 594

Query: 598 QAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
             G+RP+  T  ++L +   + ++  A    + M + G  P L TYTLL+
Sbjct: 595 LKGVRPDEGTYVAVLRSLCGLDRVESAIAEFEKMASRGCAPGLVTYTLLI 644



 Score =  103 bits (256), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 95/381 (24%), Positives = 151/381 (39%), Gaps = 74/381 (19%)

Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLI 402
           A  FF  L + +G K +  TY   V  L +A +     ++L +MV     P+V+TY+ +I
Sbjct: 309 ACQFFERLLK-SGKKPNVVTYNVAVHGLCKAGRVDEAYRILLEMVESKVTPDVITYSSII 367

Query: 403 HSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLID-------------IH---AKAGFL 446
             + +A  +++A DVF +M V  C P  VT+ TL+              +H     AGF+
Sbjct: 368 DGFCKAGRMDKADDVFTRMMVHECIPHPVTFMTLLHGFSEHKKSREAFRVHEDMVNAGFI 427

Query: 447 -------------------DVAMDMYKKMQAAGLSPDTFTYSVIINCLGKA--------- 478
                              + A+++Y KM+     PD  TY+ +I CL +A         
Sbjct: 428 PGLQTYNVLMDCVCGADSVESALEIYHKMKRKKRQPDCNTYAPLIQCLCRARRVDEAKEF 487

Query: 479 --------------------------GHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAK 512
                                     G +  A  +   +V  GC P   T+ I++     
Sbjct: 488 LDVMEADNVVPNGAICHALVEVLCKQGEVDEACSVLDNVVEVGCQPLGETFKILVEELYL 547

Query: 513 ARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPV 572
            + +++A KL R   + GF  D  TYS+ +  +   G  DEA  V  +M  K   PDE  
Sbjct: 548 RKKWEAASKLLR---SPGFVADAATYSLCVAEICKAGKPDEAVEVIEQMVLKGVRPDEGT 604

Query: 573 YGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGML 632
           Y  ++        V  A   +E M   G  P + T   L+          +A+ + + M+
Sbjct: 605 YVAVLRSLCGLDRVESAIAEFEKMASRGCAPGLVTYTLLIGEACSADMADEAFRIFEAMV 664

Query: 633 NLGLKPSLQTYTLLLSCCTEA 653
             G  P  QT   L SC  +A
Sbjct: 665 AAGFTPQAQTMRTLSSCLRDA 685



 Score = 85.1 bits (209), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 62/242 (25%), Positives = 101/242 (41%), Gaps = 33/242 (13%)

Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLI 402
           AL  ++ ++R+   + D +TY  ++  L RAR+     + LD M  D   PN    + L+
Sbjct: 449 ALEIYHKMKRKKR-QPDCNTYAPLIQCLCRARRVDEAKEFLDVMEADNVVPNGAICHALV 507

Query: 403 HSYGRANYLNEALDVFKQMQVVGCEP--------------------------------DR 430
               +   ++EA  V   +  VGC+P                                D 
Sbjct: 508 EVLCKQGEVDEACSVLDNVVEVGCQPLGETFKILVEELYLRKKWEAASKLLRSPGFVADA 567

Query: 431 VTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCE 490
            TY   +    KAG  D A+++ ++M   G+ PD  TY  ++  L     +++A   F +
Sbjct: 568 ATYSLCVAEICKAGKPDEAVEVIEQMVLKGVRPDEGTYVAVLRSLCGLDRVESAIAEFEK 627

Query: 491 MVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGY 550
           M ++GC P LVTY ++I     A     A +++  M  AGF P   T   +   L   GY
Sbjct: 628 MASRGCAPGLVTYTLLIGEACSADMADEAFRIFEAMVAAGFTPQAQTMRTLSSCLRDAGY 687

Query: 551 LD 552
            D
Sbjct: 688 QD 689



 Score = 83.2 bits (204), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 67/266 (25%), Positives = 114/266 (42%), Gaps = 3/266 (1%)

Query: 354 AGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNE 413
           AGF     TY  ++  +  A    +  ++  +M R   QP+  TY  LI    RA  ++E
Sbjct: 424 AGFIPGLQTYNVLMDCVCGADSVESALEIYHKMKRKKRQPDCNTYAPLIQCLCRARRVDE 483

Query: 414 ALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIIN 473
           A +    M+     P+      L+++  K G +D A  +   +   G  P   T+ +++ 
Sbjct: 484 AKEFLDVMEADNVVPNGAICHALVEVLCKQGEVDEACSVLDNVVEVGCQPLGETFKILVE 543

Query: 474 CLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEP 533
            L      +AA +L   + + G + +  TY++ +A   KA     A+++   M   G  P
Sbjct: 544 ELYLRKKWEAASKL---LRSPGFVADAATYSLCVAEICKAGKPDEAVEVIEQMVLKGVRP 600

Query: 534 DKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWY 593
           D+ TY  V+  L     ++ A A F +M  +   P    Y LL+     A    +A+  +
Sbjct: 601 DEGTYVAVLRSLCGLDRVESAIAEFEKMASRGCAPGLVTYTLLIGEACSADMADEAFRIF 660

Query: 594 EAMLQAGLRPNVPTCNSLLSAFLRVG 619
           EAM+ AG  P   T  +L S     G
Sbjct: 661 EAMVAAGFTPQAQTMRTLSSCLRDAG 686



 Score = 45.4 bits (106), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 31/95 (32%), Positives = 45/95 (47%), Gaps = 2/95 (2%)

Query: 355 GFKHDEHTYTTMV-GILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNE 413
           G + DE TY  ++  + G  R   AI +  ++M   GC P +VTY  LI     A+  +E
Sbjct: 597 GVRPDEGTYVAVLRSLCGLDRVESAIAEF-EKMASRGCAPGLVTYTLLIGEACSADMADE 655

Query: 414 ALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDV 448
           A  +F+ M   G  P   T  TL      AG+ D+
Sbjct: 656 AFRIFEAMVAAGFTPQAQTMRTLSSCLRDAGYQDL 690


>gi|356524104|ref|XP_003530672.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
           mitochondrial-like [Glycine max]
          Length = 742

 Score =  170 bits (431), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 107/381 (28%), Positives = 180/381 (47%)

Query: 359 DEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVF 418
           D   YTT++   G++       KL D+M R    P+ VTY  +IH   +A  + EA  +F
Sbjct: 356 DNVVYTTLISGFGKSGNVSVEYKLFDEMKRKKIVPDFVTYTSMIHGLCQAGKVVEARKLF 415

Query: 419 KQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKA 478
            +M   G +PD VTY  LID + KAG +  A  ++ +M   GL+P+  TY+ +++ L K 
Sbjct: 416 SEMLSKGLKPDEVTYTALIDGYCKAGEMKEAFSLHNQMVEKGLTPNVVTYTALVDGLCKC 475

Query: 479 GHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTY 538
           G +  A++L  EM  +G  PN+ TYN +I    K  N + A+KL  +M  AGF PD +TY
Sbjct: 476 GEVDIANELLHEMSEKGLQPNVCTYNALINGLCKVGNIEQAVKLMEEMDLAGFFPDTITY 535

Query: 539 SIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQ 598
           + +M+     G + +A  +   M  K   P    + +L++ +  +G +       + ML 
Sbjct: 536 TTIMDAYCKMGEMAKAHELLRIMLDKGLQPTIVTFNVLMNGFCMSGMLEDGERLIKWMLD 595

Query: 599 AGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYD 658
            G+ PN  T NSL+  +     +     + +GM   G+ P   TY +L+    +AR+  +
Sbjct: 596 KGIMPNATTFNSLMKQYCIRNNMRATIEIYKGMHAQGVVPDTNTYNILIKGHCKARNMKE 655

Query: 659 MGFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRESKRGLVDAVVD 718
             F H+ M   G        +    G   +   +      E M +    +++ + D  VD
Sbjct: 656 AWFLHKEMVEKGFSLTAASYNSLIKGFYKRKKFEEARKLFEEMRTHGFIAEKEIYDIFVD 715

Query: 719 FLHKSGLKEEAGSVWEVAAQK 739
             ++ G  E    + + A +K
Sbjct: 716 VNYEEGNWENTLELCDEAIEK 736



 Score =  167 bits (423), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 97/313 (30%), Positives = 165/313 (52%), Gaps = 11/313 (3%)

Query: 359 DEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVF 418
           D  +Y+ +V    +  Q G + KL++++ R G +PN  TYN +I    +   + EA  V 
Sbjct: 286 DVVSYSVIVDGYCQVEQLGKVLKLMEELQRKGLKPNQYTYNSIISFLCKTGRVVEAEQVL 345

Query: 419 KQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKA 478
           + M+     PD V Y TLI    K+G + V   ++ +M+   + PD  TY+ +I+ L +A
Sbjct: 346 RVMKNQRIFPDNVVYTTLISGFGKSGNVSVEYKLFDEMKRKKIVPDFVTYTSMIHGLCQA 405

Query: 479 GHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTY 538
           G +  A +LF EM+++G  P+ VTY  +I    KA   + A  L+  M   G  P+ VTY
Sbjct: 406 GKVVEARKLFSEMLSKGLKPDEVTYTALIDGYCKAGEMKEAFSLHNQMVEKGLTPNVVTY 465

Query: 539 SIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQ 598
           + +++ L  CG +D A  +  EM  K   P+   Y  L++   K GN+ +A +  E M  
Sbjct: 466 TALVDGLCKCGEVDIANELLHEMSEKGLQPNVCTYNALINGLCKVGNIEQAVKLMEEMDL 525

Query: 599 AGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYD 658
           AG  P+  T  +++ A+ ++G+++ A+ LL+ ML+ GL+P++ T+ +L++          
Sbjct: 526 AGFFPDTITYTTIMDAYCKMGEMAKAHELLRIMLDKGLQPTIVTFNVLMN---------- 575

Query: 659 MGFCHELMAVSGH 671
            GFC   M   G 
Sbjct: 576 -GFCMSGMLEDGE 587



 Score =  152 bits (383), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 92/319 (28%), Positives = 162/319 (50%), Gaps = 11/319 (3%)

Query: 329 QANQVLKQLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVR 388
           Q  +VLK +++          L+R+ G K +++TY +++  L +  +     ++L  M  
Sbjct: 302 QLGKVLKLMEE----------LQRK-GLKPNQYTYNSIISFLCKTGRVVEAEQVLRVMKN 350

Query: 389 DGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDV 448
               P+ V Y  LI  +G++  ++    +F +M+     PD VTY ++I    +AG +  
Sbjct: 351 QRIFPDNVVYTTLISGFGKSGNVSVEYKLFDEMKRKKIVPDFVTYTSMIHGLCQAGKVVE 410

Query: 449 AMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIA 508
           A  ++ +M + GL PD  TY+ +I+   KAG ++ A  L  +MV +G  PN+VTY  ++ 
Sbjct: 411 ARKLFSEMLSKGLKPDEVTYTALIDGYCKAGEMKEAFSLHNQMVEKGLTPNVVTYTALVD 470

Query: 509 LQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVP 568
              K      A +L  +M   G +P+  TY+ ++  L   G +++A  +  EM    + P
Sbjct: 471 GLCKCGEVDIANELLHEMSEKGLQPNVCTYNALINGLCKVGNIEQAVKLMEEMDLAGFFP 530

Query: 569 DEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLL 628
           D   Y  ++D + K G + KA E    ML  GL+P + T N L++ F   G L D   L+
Sbjct: 531 DTITYTTIMDAYCKMGEMAKAHELLRIMLDKGLQPTIVTFNVLMNGFCMSGMLEDGERLI 590

Query: 629 QGMLNLGLKPSLQTYTLLL 647
           + ML+ G+ P+  T+  L+
Sbjct: 591 KWMLDKGIMPNATTFNSLM 609



 Score =  148 bits (373), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 92/309 (29%), Positives = 162/309 (52%), Gaps = 7/309 (2%)

Query: 362 TYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQM 421
           +Y  ++ +L +  +    + LL QM   G  P+VV+Y+ ++  Y +   L + L + +++
Sbjct: 254 SYNIILHLLCQLGKVKEAHSLLIQMEFRGNVPDVVSYSVIVDGYCQVEQLGKVLKLMEEL 313

Query: 422 QVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHL 481
           Q  G +P++ TY ++I    K G +  A  + + M+   + PD   Y+ +I+  GK+G++
Sbjct: 314 QRKGLKPNQYTYNSIISFLCKTGRVVEAEQVLRVMKNQRIFPDNVVYTTLISGFGKSGNV 373

Query: 482 QAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIV 541
              ++LF EM  +  +P+ VTY  MI    +A     A KL+ +M + G +PD+VTY+ +
Sbjct: 374 SVEYKLFDEMKRKKIVPDFVTYTSMIHGLCQAGKVVEARKLFSEMLSKGLKPDEVTYTAL 433

Query: 542 MEVLGHC--GYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQA 599
           ++  G+C  G + EA ++  +M  K   P+   Y  LVD   K G V  A E    M + 
Sbjct: 434 ID--GYCKAGEMKEAFSLHNQMVEKGLTPNVVTYTALVDGLCKCGEVDIANELLHEMSEK 491

Query: 600 GLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDM 659
           GL+PNV T N+L++   +VG +  A  L++ M   G  P   TYT ++    +     +M
Sbjct: 492 GLQPNVCTYNALINGLCKVGNIEQAVKLMEEMDLAGFFPDTITYTTIMDAYCKMG---EM 548

Query: 660 GFCHELMAV 668
              HEL+ +
Sbjct: 549 AKAHELLRI 557



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 83/255 (32%), Positives = 138/255 (54%)

Query: 394 NVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMY 453
           N V+YN ++H   +   + EA  +  QM+  G  PD V+Y  ++D + +   L   + + 
Sbjct: 251 NTVSYNIILHLLCQLGKVKEAHSLLIQMEFRGNVPDVVSYSVIVDGYCQVEQLGKVLKLM 310

Query: 454 KKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKA 513
           +++Q  GL P+ +TY+ II+ L K G +  A Q+   M NQ   P+ V Y  +I+   K+
Sbjct: 311 EELQRKGLKPNQYTYNSIISFLCKTGRVVEAEQVLRVMKNQRIFPDNVVYTTLISGFGKS 370

Query: 514 RNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVY 573
            N     KL+ +M+     PD VTY+ ++  L   G + EA  +F+EM  K   PDE  Y
Sbjct: 371 GNVSVEYKLFDEMKRKKIVPDFVTYTSMIHGLCQAGKVVEARKLFSEMLSKGLKPDEVTY 430

Query: 574 GLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLN 633
             L+D + KAG +++A+  +  M++ GL PNV T  +L+    + G++  A  LL  M  
Sbjct: 431 TALIDGYCKAGEMKEAFSLHNQMVEKGLTPNVVTYTALVDGLCKCGEVDIANELLHEMSE 490

Query: 634 LGLKPSLQTYTLLLS 648
            GL+P++ TY  L++
Sbjct: 491 KGLQPNVCTYNALIN 505



 Score =  135 bits (341), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 79/293 (26%), Positives = 145/293 (49%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           G K DE TYT ++    +A +      L +QMV  G  PNVVTY  L+    +   ++ A
Sbjct: 422 GLKPDEVTYTALIDGYCKAGEMKEAFSLHNQMVEKGLTPNVVTYTALVDGLCKCGEVDIA 481

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
            ++  +M   G +P+  TY  LI+   K G ++ A+ + ++M  AG  PDT TY+ I++ 
Sbjct: 482 NELLHEMSEKGLQPNVCTYNALINGLCKVGNIEQAVKLMEEMDLAGFFPDTITYTTIMDA 541

Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPD 534
             K G +  AH+L   M+++G  P +VT+N+++     +   +   +L + M + G  P+
Sbjct: 542 YCKMGEMAKAHELLRIMLDKGLQPTIVTFNVLMNGFCMSGMLEDGERLIKWMLDKGIMPN 601

Query: 535 KVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYE 594
             T++ +M+       +     ++  M  +  VPD   Y +L+    KA N+++AW  ++
Sbjct: 602 ATTFNSLMKQYCIRNNMRATIEIYKGMHAQGVVPDTNTYNILIKGHCKARNMKEAWFLHK 661

Query: 595 AMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
            M++ G      + NSL+  F +  +  +A  L + M   G     + Y + +
Sbjct: 662 EMVEKGFSLTAASYNSLIKGFYKRKKFEEARKLFEEMRTHGFIAEKEIYDIFV 714



 Score =  121 bits (303), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 102/435 (23%), Positives = 194/435 (44%), Gaps = 34/435 (7%)

Query: 339 DHTVALGFFNW--LRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVV 396
           D+ + L FF+W  LRR    +    +   +V I   ++     ++L+ +      +P++ 
Sbjct: 106 DYKLVLDFFDWARLRRDPSLE----SLCIVVQIAVASKDLRMAHRLVFEFWE---KPHLD 158

Query: 397 TYN-------RLIHSYGRANYLNEALDVFKQMQV-------VGCEPDRV-TYCTLIDIHA 441
             N       RLI++Y          DVF Q+ V        G   D++  Y  L+ + +
Sbjct: 159 VGNSFDRFTERLIYTYKDWGAHPLVFDVFFQVLVEAGLLLEAGKLFDKLLNYGVLVSVDS 218

Query: 442 KAGFL----------DVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEM 491
              FL            A  ++++    G+  +T +Y++I++ L + G ++ AH L  +M
Sbjct: 219 CNLFLARLSNSFDGIRTAFRVFREYSEVGVCWNTVSYNIILHLLCQLGKVKEAHSLLIQM 278

Query: 492 VNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYL 551
             +G +P++V+Y++++    +       LKL  ++Q  G +P++ TY+ ++  L   G +
Sbjct: 279 EFRGNVPDVVSYSVIVDGYCQVEQLGKVLKLMEELQRKGLKPNQYTYNSIISFLCKTGRV 338

Query: 552 DEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSL 611
            EAE V   M+ +   PD  VY  L+  +GK+GNV   ++ ++ M +  + P+  T  S+
Sbjct: 339 VEAEQVLRVMKNQRIFPDNVVYTTLISGFGKSGNVSVEYKLFDEMKRKKIVPDFVTYTSM 398

Query: 612 LSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGFCHELMAVSGH 671
           +    + G++ +A  L   ML+ GLKP   TYT L+    +A    +    H  M   G 
Sbjct: 399 IHGLCQAGKVVEARKLFSEMLSKGLKPDEVTYTALIDGYCKAGEMKEAFSLHNQMVEKGL 458

Query: 672 PAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRESKRGLVDAVVDFLHKSGLKEEAGS 731
             ++   +    G       D     L  M  +  +      +A+++ L K G  E+A  
Sbjct: 459 TPNVVTYTALVDGLCKCGEVDIANELLHEMSEKGLQPNVCTYNALINGLCKVGNIEQAVK 518

Query: 732 VWEVAAQKNVYPDAV 746
           + E       +PD +
Sbjct: 519 LMEEMDLAGFFPDTI 533



 Score =  119 bits (299), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 74/274 (27%), Positives = 129/274 (47%), Gaps = 39/274 (14%)

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
           + G   +  TYT +V  L +  +    N+LL +M   G QPNV TYN LI+   +   + 
Sbjct: 455 EKGLTPNVVTYTALVDGLCKCGEVDIANELLHEMSEKGLQPNVCTYNALINGLCKVGNIE 514

Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
           +A+ + ++M + G  PD +TY T++D + K G +  A ++ + M   GL P   T++V++
Sbjct: 515 QAVKLMEEMDLAGFFPDTITYTTIMDAYCKMGEMAKAHELLRIMLDKGLQPTIVTFNVLM 574

Query: 473 NCLGKAGHLQAAHQLFCEMVN-----------------------------------QGCI 497
           N    +G L+   +L   M++                                   QG +
Sbjct: 575 NGFCMSGMLEDGERLIKWMLDKGIMPNATTFNSLMKQYCIRNNMRATIEIYKGMHAQGVV 634

Query: 498 PNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAV 557
           P+  TYNI+I    KARN + A  L+++M   GF     +Y+ +++        +EA  +
Sbjct: 635 PDTNTYNILIKGHCKARNMKEAWFLHKEMVEKGFSLTAASYNSLIKGFYKRKKFEEARKL 694

Query: 558 FAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWE 591
           F EMR   ++ ++ +Y + VD+  + GN    WE
Sbjct: 695 FEEMRTHGFIAEKEIYDIFVDVNYEEGN----WE 724


>gi|356522073|ref|XP_003529674.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16390,
           chloroplastic-like [Glycine max]
          Length = 685

 Score =  170 bits (431), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 135/549 (24%), Positives = 253/549 (46%), Gaps = 42/549 (7%)

Query: 333 VLKQLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQ 392
           V+  + +  V     N+ +R+     +   Y   + +  +++   A+ KL D+M++ G +
Sbjct: 135 VINNMSNSRVVPFVLNYFQRRIRPTREVILYNVTLKVFRKSKDLDAMEKLFDEMLQRGVR 194

Query: 393 PNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDM 452
           P+ VT++ +I      +  N+A++ F++M   GCEPD VTY  +ID + +AG +D+A+ +
Sbjct: 195 PDNVTFSTIISCARICSLPNKAVEWFEKMSSFGCEPDDVTYSAMIDAYGRAGNIDMALRL 254

Query: 453 YKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAK 512
           Y + +      DT T+S +I   G AG+      ++ EM   G  PN+V YN ++    +
Sbjct: 255 YDRARTEKWRLDTVTFSTLIKMYGLAGNYDGCLNVYQEMKVLGVKPNMVIYNTLLDAMGR 314

Query: 513 ARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPV 572
           A+    A  +Y +M N GF P+ VTY+ ++   G   Y ++A  V+ EM+ K    +  +
Sbjct: 315 AKRPWQAKSIYTEMTNNGFSPNWVTYASLLRAYGRGRYSEDALFVYKEMKEKGMEMNTHL 374

Query: 573 YGLLVDLWGKAGNVRKAWEWYEAM-LQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGM 631
           Y  L+ +    G   +A+E +E M   A    +  T +SL++ +   G +S+A  +L  M
Sbjct: 375 YNTLLAMCADLGLANEAFEIFEDMKTSATCLCDSWTFSSLITIYSCTGNVSEAERMLNEM 434

Query: 632 LNLGLKPSLQTYTLLLSCCTEA-RSPYDMGFCHELMAVSGHPAHMF---LLSMPSPGPDG 687
           +  G +P++   T L+ C  +  R+   +   ++L+ +   P   F   LL++ +  P  
Sbjct: 435 IESGSQPTIFVLTSLVQCYGKVGRTDDVVKTFNQLLDLGISPDDRFCGCLLNVMTQTPKE 494

Query: 688 Q---------NVRDHVGSFL-------------------EMMHSEDRESKRGLVDAVVDF 719
           +              +GS +                   E+ +S   E K+   ++++D 
Sbjct: 495 ELGKLNDCVKKANPKLGSVVRYLVEGLEEGGGEFKKEASELFNSIADEVKKPFCNSLIDL 554

Query: 720 LHKSGLKEEAGSVWEVAAQKNVYPDAVKEKGMSYWLINLHVMSDGTAVIALSRTLAWFR- 778
                L ++A  + ++     +Y D V+ K  + W ++L  +S G ++ AL    AW   
Sbjct: 555 CVNLNLLDKACELLDLGLTLEIYTD-VQSKSQTQWSLHLKSLSLGASLTALH---AWIND 610

Query: 779 -KQMLISGVG-PSRIDIVTGWGRRSRVTGTSLVRQAVQELLHMFSFPFFTENGNSGCFVG 836
             + L SG   P  + I TG G+  R +   L    V+  L+  + PF      +G F+ 
Sbjct: 611 LSKTLESGEDLPPLLGINTGHGKH-RYSDKGLA-SVVESHLNELNAPFHEAPDKAGWFLT 668

Query: 837 CGEPLNKWL 845
                  WL
Sbjct: 669 TQVAAKSWL 677



 Score = 47.8 bits (112), Expect = 0.024,   Method: Compositional matrix adjust.
 Identities = 32/143 (22%), Positives = 60/143 (41%), Gaps = 10/143 (6%)

Query: 304 ILRQWKWGPLAEEAL------GNTNYSMDAYQANQVLKQLQDHTVA---LGFFNWLRRQA 354
           +LR +  G  +E+AL            M+ +  N +L    D  +A      F  ++  A
Sbjct: 343 LLRAYGRGRYSEDALFVYKEMKEKGMEMNTHLYNTLLAMCADLGLANEAFEIFEDMKTSA 402

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
               D  T+++++ I           ++L++M+  G QP +     L+  YG+    ++ 
Sbjct: 403 TCLCDSWTFSSLITIYSCTGNVSEAERMLNEMIESGSQPTIFVLTSLVQCYGKVGRTDDV 462

Query: 415 LDVFKQMQVVGCEP-DRVTYCTL 436
           +  F Q+  +G  P DR   C L
Sbjct: 463 VKTFNQLLDLGISPDDRFCGCLL 485


>gi|224125496|ref|XP_002319601.1| predicted protein [Populus trichocarpa]
 gi|222857977|gb|EEE95524.1| predicted protein [Populus trichocarpa]
          Length = 460

 Score =  170 bits (430), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 98/289 (33%), Positives = 162/289 (56%), Gaps = 6/289 (2%)

Query: 362 TYTTMV-GILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQ 420
           T+ T++ G+  +A+   A+ KL D+MV+ G +P+V+TY+ +I+   +      AL + K+
Sbjct: 12  TFNTLLSGLCSKAKIMDAV-KLFDEMVKMGHEPDVITYSTIINGLCKMGNTTMALQLLKK 70

Query: 421 MQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGH 480
           M+  GC+P+ V Y T+ID   K   +  AMD + +M   G+ PD FTYS I++     G 
Sbjct: 71  MEEKGCKPNVVAYNTIIDSLCKDRLVTEAMDFFSEMVKEGIPPDVFTYSSILHGFCNLGR 130

Query: 481 LQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSI 540
           +  A  LF +MV +  IPN VT+ I+I    K R    A  ++  M   G EPD  TY+ 
Sbjct: 131 VNEATSLFKQMVERNVIPNKVTFTILIDGLCKKRMISEAWLVFETMTEKGLEPDVYTYNA 190

Query: 541 VMEVLGHC--GYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQ 598
           +++  G+C    +DEA+ +F  M RK   P+   Y +L++   K+G + +A      M  
Sbjct: 191 LVD--GYCSRSQMDEAQKLFNIMDRKGCAPNVRSYNILINGHCKSGRIDEAKGLLAEMSH 248

Query: 599 AGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
             L P++ T ++L+  F +VG+  +A  LL+ M + GL P+L TY+++L
Sbjct: 249 KSLTPDIFTYSTLMRGFCQVGRPQEAQELLKEMCSYGLLPNLITYSIVL 297



 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 89/315 (28%), Positives = 157/315 (49%), Gaps = 1/315 (0%)

Query: 334 LKQLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQP 393
           L ++ + T+AL     +  + G K +   Y T++  L + R          +MV++G  P
Sbjct: 55  LCKMGNTTMALQLLKKMEEK-GCKPNVVAYNTIIDSLCKDRLVTEAMDFFSEMVKEGIPP 113

Query: 394 NVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMY 453
           +V TY+ ++H +     +NEA  +FKQM      P++VT+  LID   K   +  A  ++
Sbjct: 114 DVFTYSSILHGFCNLGRVNEATSLFKQMVERNVIPNKVTFTILIDGLCKKRMISEAWLVF 173

Query: 454 KKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKA 513
           + M   GL PD +TY+ +++       +  A +LF  M  +GC PN+ +YNI+I    K+
Sbjct: 174 ETMTEKGLEPDVYTYNALVDGYCSRSQMDEAQKLFNIMDRKGCAPNVRSYNILINGHCKS 233

Query: 514 RNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVY 573
                A  L  +M +    PD  TYS +M      G   EA+ +  EM     +P+   Y
Sbjct: 234 GRIDEAKGLLAEMSHKSLTPDIFTYSTLMRGFCQVGRPQEAQELLKEMCSYGLLPNLITY 293

Query: 574 GLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLN 633
            +++D   K G++ +A+E  +AM ++ + PN+     L+      G+L  A  L   +  
Sbjct: 294 SIVLDGLCKHGHLDEAFELLKAMQESKIEPNIFIYTILIEGMCTFGKLEAARELFSNLFV 353

Query: 634 LGLKPSLQTYTLLLS 648
            G++P++ TYT+++S
Sbjct: 354 KGIQPTVVTYTVMIS 368



 Score =  151 bits (381), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 89/297 (29%), Positives = 154/297 (51%), Gaps = 4/297 (1%)

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
           + G + D  TY+T++  L +        +LL +M   GC+PNVV YN +I S  +   + 
Sbjct: 38  KMGHEPDVITYSTIINGLCKMGNTTMALQLLKKMEEKGCKPNVVAYNTIIDSLCKDRLVT 97

Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
           EA+D F +M   G  PD  TY +++      G ++ A  ++K+M    + P+  T++++I
Sbjct: 98  EAMDFFSEMVKEGIPPDVFTYSSILHGFCNLGRVNEATSLFKQMVERNVIPNKVTFTILI 157

Query: 473 NCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFE 532
           + L K   +  A  +F  M  +G  P++ TYN ++           A KL+  M   G  
Sbjct: 158 DGLCKKRMISEAWLVFETMTEKGLEPDVYTYNALVDGYCSRSQMDEAQKLFNIMDRKGCA 217

Query: 533 PDKVTYSIVMEVLGHC--GYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAW 590
           P+  +Y+I++   GHC  G +DEA+ + AEM  K+  PD   Y  L+  + + G  ++A 
Sbjct: 218 PNVRSYNILIN--GHCKSGRIDEAKGLLAEMSHKSLTPDIFTYSTLMRGFCQVGRPQEAQ 275

Query: 591 EWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
           E  + M   GL PN+ T + +L    + G L +A+ LL+ M    ++P++  YT+L+
Sbjct: 276 ELLKEMCSYGLLPNLITYSIVLDGLCKHGHLDEAFELLKAMQESKIEPNIFIYTILI 332



 Score =  150 bits (379), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 86/285 (30%), Positives = 143/285 (50%)

Query: 362 TYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQM 421
           T+T ++  L + R       + + M   G +P+V TYN L+  Y   + ++EA  +F  M
Sbjct: 152 TFTILIDGLCKKRMISEAWLVFETMTEKGLEPDVYTYNALVDGYCSRSQMDEAQKLFNIM 211

Query: 422 QVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHL 481
              GC P+  +Y  LI+ H K+G +D A  +  +M    L+PD FTYS ++    + G  
Sbjct: 212 DRKGCAPNVRSYNILINGHCKSGRIDEAKGLLAEMSHKSLTPDIFTYSTLMRGFCQVGRP 271

Query: 482 QAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIV 541
           Q A +L  EM + G +PNL+TY+I++    K  +   A +L + MQ +  EP+   Y+I+
Sbjct: 272 QEAQELLKEMCSYGLLPNLITYSIVLDGLCKHGHLDEAFELLKAMQESKIEPNIFIYTIL 331

Query: 542 MEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGL 601
           +E +   G L+ A  +F+ +  K   P    Y +++    K G   +A E +  M   G 
Sbjct: 332 IEGMCTFGKLEAARELFSNLFVKGIQPTVVTYTVMISGLLKGGLSNEACELFREMAVNGC 391

Query: 602 RPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLL 646
            PN  T N ++  FLR G   +A  L++ M+  G      T+ +L
Sbjct: 392 LPNSCTYNVIIQGFLRNGDTPNAVRLIEEMVGKGFSADSSTFRML 436



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 75/274 (27%), Positives = 133/274 (48%), Gaps = 9/274 (3%)

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
           + G + D +TY  +V       Q     KL + M R GC PNV +YN LI+ + ++  ++
Sbjct: 178 EKGLEPDVYTYNALVDGYCSRSQMDEAQKLFNIMDRKGCAPNVRSYNILINGHCKSGRID 237

Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
           EA  +  +M      PD  TY TL+    + G    A ++ K+M + GL P+  TYS+++
Sbjct: 238 EAKGLLAEMSHKSLTPDIFTYSTLMRGFCQVGRPQEAQELLKEMCSYGLLPNLITYSIVL 297

Query: 473 NCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFE 532
           + L K GHL  A +L   M      PN+  Y I+I         ++A +L+ ++   G +
Sbjct: 298 DGLCKHGHLDEAFELLKAMQESKIEPNIFIYTILIEGMCTFGKLEAARELFSNLFVKGIQ 357

Query: 533 PDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEW 592
           P  VTY++++  L   G  +EA  +F EM     +P+   Y +++  + + G+   A   
Sbjct: 358 PTVVTYTVMISGLLKGGLSNEACELFREMAVNGCLPNSCTYNVIIQGFLRNGDTPNAVRL 417

Query: 593 YEAMLQAG---------LRPNVPTCNSLLSAFLR 617
            E M+  G         +  ++ + + ++S F+R
Sbjct: 418 IEEMVGKGFSADSSTFRMLSDLESSDEIISQFMR 451


>gi|302806733|ref|XP_002985098.1| hypothetical protein SELMODRAFT_121399 [Selaginella moellendorffii]
 gi|300147308|gb|EFJ13973.1| hypothetical protein SELMODRAFT_121399 [Selaginella moellendorffii]
          Length = 659

 Score =  170 bits (430), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 134/509 (26%), Positives = 221/509 (43%), Gaps = 60/509 (11%)

Query: 269 ERFSKPSREMKIPAGLAPFSRHFASTGNVVESVSRILRQWKWGPLAEEALGNTNYSMDAY 328
           ERFS PS+    P+         ++ G ++   SR         +A E L    +S D  
Sbjct: 14  ERFSDPSK----PSN--------STYGALITGFSRAGNSKMVLEIANEMLAR-RFSPDVI 60

Query: 329 QANQVLK---QLQDHTVALGFFN---WLRRQAGFKHDEHTYTTMVGILGRARQFGAINKL 382
             N +LK   Q+ D   AL  F    W    A       TY  ++  L + ++     +L
Sbjct: 61  THNTILKAYCQIGDLDRALSHFRGKMWCSPTA------FTYCILIHGLCQCQRIDEAYQL 114

Query: 383 LDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAK 442
           LD+M++  C P+   YN LI    +   ++ A +V K M    C PD +TY +LI    +
Sbjct: 115 LDEMIQKDCHPDAAVYNCLIAGLCKMGKIDAARNVLKMMLERSCVPDVITYTSLIVGCCQ 174

Query: 443 AGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVT 502
              LD A  + +KM+ +GL+PDT  Y+ ++N L K   L+   +L  EMV  G  P+  +
Sbjct: 175 TNALDEARKLMEKMKESGLTPDTVAYNALLNGLCKQNQLEEVSKLLEEMVEAGREPDTFS 234

Query: 503 YNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMR 562
           YN ++A   ++  Y+ A K+   M      PD VTY+ +M+       +DEAE +  +M 
Sbjct: 235 YNTVVACLCESGKYEEAGKILEKMIEKKCGPDVVTYNSLMDGFCKVSKMDEAERLLEDMV 294

Query: 563 RKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLS 622
            +   P    Y  L+  + +A  +  A+   E M +AG+ P++ T N LL    + G+L 
Sbjct: 295 GRRCAPTVITYTTLIGGFSRADRLADAYRVMEDMFKAGISPDLVTYNCLLDGLCKAGKLE 354

Query: 623 DAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGFCHELMAVSGHPAHMFLLSMPS 682
           +A+ LL+ M+     P + TY++L++           G C +L  V              
Sbjct: 355 EAHELLEVMVEKDCAPDVVTYSILVN-----------GLC-KLGKV-------------- 388

Query: 683 PGPDGQNVRDHVGSFLEMMHSEDRESKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVY 742
                    D     LEMM     +      + ++D   K+G  +E   V E+  + +  
Sbjct: 389 ---------DDARLLLEMMLERGCQPNLVTFNTMIDGFCKAGKVDEGHKVLELMKEVSCT 439

Query: 743 PDAVKEKGMSYWLINLHVMSDGTAVIALS 771
           PD V    +       + M D  A++ +S
Sbjct: 440 PDVVTYSTLIDGYCKANRMQDAFAILGIS 468



 Score =  150 bits (378), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 92/289 (31%), Positives = 143/289 (49%), Gaps = 6/289 (2%)

Query: 359 DEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVF 418
           D  TY+ +V  L +  +      LL+ M+  GCQPN+VT+N +I  + +A  ++E   V 
Sbjct: 371 DVVTYSILVNGLCKLGKVDDARLLLEMMLERGCQPNLVTFNTMIDGFCKAGKVDEGHKVL 430

Query: 419 KQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKA 478
           + M+ V C PD VTY TLID + KA  +  A  +       G+SPD  +YS ++  L   
Sbjct: 431 ELMKEVSCTPDVVTYSTLIDGYCKANRMQDAFAIL------GISPDKASYSSMLEGLCST 484

Query: 479 GHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTY 538
           G ++ A ++   M  QGC P    Y ++I           ALK+ + M   G EP+  TY
Sbjct: 485 GKVEEAQEVMDLMTKQGCPPTSSHYALIIGGLCDVERGDEALKMLQVMSERGCEPNLYTY 544

Query: 539 SIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQ 598
           SI++  L     +++A  V   M  K  VPD   Y  L+D + K   +  A++ ++ M  
Sbjct: 545 SILINGLCKTKRVEDAINVLDVMLEKGCVPDVATYTSLIDGFCKINKMDAAYQCFKTMRD 604

Query: 599 AGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
           +G  P+    N L+S F + G +  A  ++Q ML  G  P   TY  L+
Sbjct: 605 SGCEPDKLAYNILISGFCQSGNVEKAIEVMQLMLEKGCNPDAATYFSLM 653



 Score = 94.4 bits (233), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 56/191 (29%), Positives = 95/191 (49%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           G   D+ +Y++M+  L    +     +++D M + GC P    Y  +I         +EA
Sbjct: 466 GISPDKASYSSMLEGLCSTGKVEEAQEVMDLMTKQGCPPTSSHYALIIGGLCDVERGDEA 525

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
           L + + M   GCEP+  TY  LI+   K   ++ A+++   M   G  PD  TY+ +I+ 
Sbjct: 526 LKMLQVMSERGCEPNLYTYSILINGLCKTKRVEDAINVLDVMLEKGCVPDVATYTSLIDG 585

Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPD 534
             K   + AA+Q F  M + GC P+ + YNI+I+   ++ N + A+++ + M   G  PD
Sbjct: 586 FCKINKMDAAYQCFKTMRDSGCEPDKLAYNILISGFCQSGNVEKAIEVMQLMLEKGCNPD 645

Query: 535 KVTYSIVMEVL 545
             TY  +M  L
Sbjct: 646 AATYFSLMRSL 656



 Score = 89.7 bits (221), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 95/442 (21%), Positives = 169/442 (38%), Gaps = 78/442 (17%)

Query: 427 EPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFT------------------- 467
           +P   TY  LI   ++AG   + +++  +M A   SPD  T                   
Sbjct: 21  KPSNSTYGALITGFSRAGNSKMVLEIANEMLARRFSPDVITHNTILKAYCQIGDLDRALS 80

Query: 468 --------------YSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKA 513
                         Y ++I+ L +   +  A+QL  EM+ + C P+   YN +IA   K 
Sbjct: 81  HFRGKMWCSPTAFTYCILIHGLCQCQRIDEAYQLLDEMIQKDCHPDAAVYNCLIAGLCKM 140

Query: 514 RNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHC--GYLDEAEAVFAEMRRKNWVPDEP 571
               +A  + + M      PD +TY+ +  ++G C    LDEA  +  +M+     PD  
Sbjct: 141 GKIDAARNVLKMMLERSCVPDVITYTSL--IVGCCQTNALDEARKLMEKMKESGLTPDTV 198

Query: 572 VYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGM 631
            Y  L++   K   + +  +  E M++AG  P+  + N++++     G+  +A  +L+ M
Sbjct: 199 AYNALLNGLCKQNQLEEVSKLLEEMVEAGREPDTFSYNTVVACLCESGKYEEAGKILEKM 258

Query: 632 LNLGLKPSLQTYTLLLSCCTEARSPYDMGFCHELMAVSGHPAHMFLLSMPS--PGPDGQN 689
           +     P + TY  L+            GFC          A   L  M      P    
Sbjct: 259 IEKKCGPDVVTYNSLMD-----------GFCK---VSKMDEAERLLEDMVGRRCAPTVIT 304

Query: 690 VRDHVGSF------------LEMMHSEDRESKRGLVDAVVDFLHKSGLKEEAGSVWEVAA 737
               +G F            +E M            + ++D L K+G  EEA  + EV  
Sbjct: 305 YTTLIGGFSRADRLADAYRVMEDMFKAGISPDLVTYNCLLDGLCKAGKLEEAHELLEVMV 364

Query: 738 QKNVYPDAVKEKGMSYWLINLHVMSDGTAVIALSRTLAWFRKQMLISGVGPSRI---DIV 794
           +K+  PD V    +   L  L  + D   ++ +          ML  G  P+ +    ++
Sbjct: 365 EKDCAPDVVTYSILVNGLCKLGKVDDARLLLEM----------MLERGCQPNLVTFNTMI 414

Query: 795 TGWGRRSRVTGTSLVRQAVQEL 816
            G+ +  +V     V + ++E+
Sbjct: 415 DGFCKAGKVDEGHKVLELMKEV 436



 Score = 76.6 bits (187), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 45/144 (31%), Positives = 76/144 (52%), Gaps = 13/144 (9%)

Query: 326 DAYQANQVLKQLQDHTVALGFFNWLRRQAGFKHDEHTYTTMV-GILGRARQFGAINKLLD 384
           D  + ++ LK LQ           +  + G + + +TY+ ++ G+    R   AIN +LD
Sbjct: 518 DVERGDEALKMLQ-----------VMSERGCEPNLYTYSILINGLCKTKRVEDAIN-VLD 565

Query: 385 QMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAG 444
            M+  GC P+V TY  LI  + + N ++ A   FK M+  GCEPD++ Y  LI    ++G
Sbjct: 566 VMLEKGCVPDVATYTSLIDGFCKINKMDAAYQCFKTMRDSGCEPDKLAYNILISGFCQSG 625

Query: 445 FLDVAMDMYKKMQAAGLSPDTFTY 468
            ++ A+++ + M   G +PD  TY
Sbjct: 626 NVEKAIEVMQLMLEKGCNPDAATY 649


>gi|197307756|gb|ACH60229.1| pentatricopeptide-containing protein [Pseudotsuga menziesii]
 gi|197307758|gb|ACH60230.1| pentatricopeptide-containing protein [Pseudotsuga menziesii]
 gi|197307760|gb|ACH60231.1| pentatricopeptide-containing protein [Pseudotsuga menziesii]
 gi|197307772|gb|ACH60237.1| pentatricopeptide-containing protein [Pseudotsuga menziesii]
          Length = 107

 Score =  169 bits (429), Expect = 4e-39,   Method: Composition-based stats.
 Identities = 73/104 (70%), Positives = 88/104 (84%)

Query: 753 YWLINLHVMSDGTAVIALSRTLAWFRKQMLISGVGPSRIDIVTGWGRRSRVTGTSLVRQA 812
           YWLINLHVMS GTA+IALSRTLAWFR+ ++ISG+GP RIDI+TGWGRRSRV G+SLV+Q+
Sbjct: 4   YWLINLHVMSIGTALIALSRTLAWFREHLIISGLGPGRIDIITGWGRRSRVMGSSLVKQS 63

Query: 813 VQELLHMFSFPFFTENGNSGCFVGCGEPLNKWLLQSYVDRMHLL 856
           ++ LLH+F  PF  ++GNSGC VG G PL  WL Q YV+RMHLL
Sbjct: 64  IEHLLHLFESPFQVDDGNSGCLVGSGNPLTVWLHQPYVERMHLL 107


>gi|224130936|ref|XP_002320961.1| predicted protein [Populus trichocarpa]
 gi|222861734|gb|EEE99276.1| predicted protein [Populus trichocarpa]
          Length = 474

 Score =  169 bits (429), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 94/295 (31%), Positives = 163/295 (55%)

Query: 362 TYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQM 421
           T+TT++  L    +   +  L D M+  G QPNV TYN +I+S  ++   NEAL   KQM
Sbjct: 134 TFTTLLNGLCMEGKMDQVMMLYDDMLVRGLQPNVYTYNVIINSLSKSGKANEALGFLKQM 193

Query: 422 QVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHL 481
           + VGC P+ V Y TLID +   G +D A  ++  M + G +P+ +TY+ ++N   K   +
Sbjct: 194 EKVGCVPNVVNYSTLIDGYCLRGQMDEARSVFDLMVSKGCTPNVYTYTSLMNGYCKIERI 253

Query: 482 QAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIV 541
           + A QL  E + +G +P++VT+  +I+   +A    +A +L+R +   G  P+ +TY ++
Sbjct: 254 EEAVQLLDETLRKGLVPDIVTFTTIISGLCRAGRPLAAQQLFRYICAHGHTPNIMTYGVL 313

Query: 542 MEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGL 601
           ++ L   G L+EA A+F EM+R    P+  +Y +L+D   K G ++   E +  ++  GL
Sbjct: 314 LDGLCKHGNLEEAFALFQEMQRSTVKPNLVIYTILIDSLCKCGKIKDGKELFSRLIDEGL 373

Query: 602 RPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSP 656
           +PNV T  +L+ A  + G + +A+ L + M   G  P    Y +++    + + P
Sbjct: 374 KPNVYTYTALVGALCKEGLIIEAHKLFRKMEEDGCTPDKCAYNVIIQGFLQHKDP 428



 Score =  142 bits (359), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 86/292 (29%), Positives = 149/292 (51%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           G + + +TY  ++  L ++ +       L QM + GC PNVV Y+ LI  Y     ++EA
Sbjct: 162 GLQPNVYTYNVIINSLSKSGKANEALGFLKQMEKVGCVPNVVNYSTLIDGYCLRGQMDEA 221

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
             VF  M   GC P+  TY +L++ + K   ++ A+ +  +    GL PD  T++ II+ 
Sbjct: 222 RSVFDLMVSKGCTPNVYTYTSLMNGYCKIERIEEAVQLLDETLRKGLVPDIVTFTTIISG 281

Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPD 534
           L +AG   AA QLF  +   G  PN++TY +++    K  N + A  L+++MQ +  +P+
Sbjct: 282 LCRAGRPLAAQQLFRYICAHGHTPNIMTYGVLLDGLCKHGNLEEAFALFQEMQRSTVKPN 341

Query: 535 KVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYE 594
            V Y+I+++ L  CG + + + +F+ +  +   P+   Y  LV    K G + +A + + 
Sbjct: 342 LVIYTILIDSLCKCGKIKDGKELFSRLIDEGLKPNVYTYTALVGALCKEGLIIEAHKLFR 401

Query: 595 AMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLL 646
            M + G  P+    N ++  FL+    S A  L++ M+N G      T  LL
Sbjct: 402 KMEEDGCTPDKCAYNVIIQGFLQHKDPSMARQLVEEMVNRGFSADAATRALL 453



 Score =  135 bits (340), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 88/366 (24%), Positives = 174/366 (47%), Gaps = 19/366 (5%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           G + D H+ + ++       +      +L ++++ G +P++VT+  L++       +++ 
Sbjct: 92  GIEQDIHSLSILINCFCHLHRVDFGLSVLSKILKLGLEPSIVTFTTLLNGLCMEGKMDQV 151

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
           + ++  M V G +P+  TY  +I+  +K+G  + A+   K+M+  G  P+   YS +I+ 
Sbjct: 152 MMLYDDMLVRGLQPNVYTYNVIINSLSKSGKANEALGFLKQMEKVGCVPNVVNYSTLIDG 211

Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPD 534
               G +  A  +F  MV++GC PN+ TY  ++    K    + A++L  +    G  PD
Sbjct: 212 YCLRGQMDEARSVFDLMVSKGCTPNVYTYTSLMNGYCKIERIEEAVQLLDETLRKGLVPD 271

Query: 535 KVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYE 594
            VT++ ++  L   G    A+ +F  +      P+   YG+L+D   K GN+ +A+  ++
Sbjct: 272 IVTFTTIISGLCRAGRPLAAQQLFRYICAHGHTPNIMTYGVLLDGLCKHGNLEEAFALFQ 331

Query: 595 AMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEAR 654
            M ++ ++PN+     L+ +  + G++ D   L   +++ GLKP++ TYT L+       
Sbjct: 332 EMQRSTVKPNLVIYTILIDSLCKCGKIKDGKELFSRLIDEGLKPNVYTYTALVG------ 385

Query: 655 SPYDMGFCHELMAVSGHPAHMFLLSMPSPG--PDGQNVRDHVGSFLEMMHSEDRESKRGL 712
                  C E + +    AH     M   G  PD       +  FL+    +D    R L
Sbjct: 386 -----ALCKEGLIIE---AHKLFRKMEEDGCTPDKCAYNVIIQGFLQ---HKDPSMARQL 434

Query: 713 VDAVVD 718
           V+ +V+
Sbjct: 435 VEEMVN 440



 Score =  112 bits (279), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 69/257 (26%), Positives = 129/257 (50%), Gaps = 4/257 (1%)

Query: 393 PNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDM 452
           P +V +++L  S  R  +    + + K+++ +G E D  +   LI+       +D  + +
Sbjct: 60  PCIVEFSKLFSSIVRMGHYETVVYLSKEIEFLGIEQDIHSLSILINCFCHLHRVDFGLSV 119

Query: 453 YKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAK 512
             K+   GL P   T++ ++N L   G +     L+ +M+ +G  PN+ TYN++I   +K
Sbjct: 120 LSKILKLGLEPSIVTFTTLLNGLCMEGKMDQVMMLYDDMLVRGLQPNVYTYNVIINSLSK 179

Query: 513 ARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHC--GYLDEAEAVFAEMRRKNWVPDE 570
           +     AL   + M+  G  P+ V YS +++  G+C  G +DEA +VF  M  K   P+ 
Sbjct: 180 SGKANEALGFLKQMEKVGCVPNVVNYSTLID--GYCLRGQMDEARSVFDLMVSKGCTPNV 237

Query: 571 PVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQG 630
             Y  L++ + K   + +A +  +  L+ GL P++ T  +++S   R G+   A  L + 
Sbjct: 238 YTYTSLMNGYCKIERIEEAVQLLDETLRKGLVPDIVTFTTIISGLCRAGRPLAAQQLFRY 297

Query: 631 MLNLGLKPSLQTYTLLL 647
           +   G  P++ TY +LL
Sbjct: 298 ICAHGHTPNIMTYGVLL 314



 Score = 97.4 bits (241), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 72/335 (21%), Positives = 146/335 (43%), Gaps = 2/335 (0%)

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
           ++AL  F+ M +    P  V +  L     + G  +  + + K+++  G+  D  + S++
Sbjct: 44  DDALASFRLMLLRKPLPCIVEFSKLFSSIVRMGHYETVVYLSKEIEFLGIEQDIHSLSIL 103

Query: 472 INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF 531
           INC      +     +  +++  G  P++VT+  ++            + LY DM   G 
Sbjct: 104 INCFCHLHRVDFGLSVLSKILKLGLEPSIVTFTTLLNGLCMEGKMDQVMMLYDDMLVRGL 163

Query: 532 EPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWE 591
           +P+  TY++++  L   G  +EA     +M +   VP+   Y  L+D +   G + +A  
Sbjct: 164 QPNVYTYNVIINSLSKSGKANEALGFLKQMEKVGCVPNVVNYSTLIDGYCLRGQMDEARS 223

Query: 592 WYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCT 651
            ++ M+  G  PNV T  SL++ + ++ ++ +A  LL   L  GL P + T+T ++S   
Sbjct: 224 VFDLMVSKGCTPNVYTYTSLMNGYCKIERIEEAVQLLDETLRKGLVPDIVTFTTIISGLC 283

Query: 652 EARSPYDMGFCHELMAVSGHPAHMFLLSMPSPGPDGQ-NVRDHVGSFLEMMHSEDRESKR 710
            A  P         +   GH  ++    +   G     N+ +    F EM  S  + +  
Sbjct: 284 RAGRPLAAQQLFRYICAHGHTPNIMTYGVLLDGLCKHGNLEEAFALFQEMQRSTVKPNLV 343

Query: 711 GLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDA 745
            +   ++D L K G  ++   ++     + + P+ 
Sbjct: 344 -IYTILIDSLCKCGKIKDGKELFSRLIDEGLKPNV 377


>gi|414868449|tpg|DAA47006.1| TPA: hypothetical protein ZEAMMB73_127498 [Zea mays]
          Length = 870

 Score =  169 bits (428), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 132/516 (25%), Positives = 235/516 (45%), Gaps = 26/516 (5%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           G   D +TY T V  + +    G   +++  M  +  +PNVVTY+ L+  + +    +EA
Sbjct: 345 GSGRDIYTYNTFVDAICKCGNMGLALQVVLDMEANNAKPNVVTYSTLMDGFSKLEKYDEA 404

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
           L + ++M+ +  + DRV Y TL+ I+ K G  D    + ++M+  G+  DT TY+ +IN 
Sbjct: 405 LKLREKMKSLRIQLDRVCYNTLLAIYVKTGKYDEIATVCEEMEKLGIEKDTVTYNSLING 464

Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPD 534
            GK G L     L  +M  QG  P+++TY+ +I + +KA  +  A  +Y D + +G + D
Sbjct: 465 YGKQGRLDMVAFLVQDMRAQGVAPSVLTYSTLIDIYSKAGMHGDAFNVYLDFKESGLKAD 524

Query: 535 KVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYE 594
            V +S  ++ L   G ++ A ++  EM +    P+   Y  ++D +GK+    +      
Sbjct: 525 VVLFSSFIDTLAKNGLVECALSLLDEMMKMGIKPNVVTYNTIIDAFGKSKIFTEEDSDIG 584

Query: 595 AMLQAG------LRPNVPTCNSLLSA----FLRVGQLSDAYHLLQGMLNLGLKPSLQTYT 644
            M   G      +R   P      SA      R  +L     L Q M+  G++P++ T++
Sbjct: 585 DMGIVGVYGGQVVRVTNPVIRGGRSATDVRMRRSQELFFILELFQKMVQQGVRPNVVTFS 644

Query: 645 LLLSCCTEARSPYDMGFCHELMAVSGHP----AHMFLLSMPSPGPDGQNVRDHVGSFLEM 700
            +L+ C+   S  D     E + +  +     A+  L+         +++ + +G     
Sbjct: 645 AILNACSRCNSFEDAALLLEQLRLFDNSVYGVAYGLLMGHREAWSQARSLFNQLGRM--- 701

Query: 701 MHSEDRESKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAVKEKGMSYWLINLHV 760
               D  +     +A+ D L   G ++ A  V      + V+     E     + ++LH+
Sbjct: 702 ----DSPTSSAFYNALTDVLWHFGQRQGAQQVVLEGVNRRVW-----ENTWGDFCLDLHL 752

Query: 761 MSDGTAVIALSRTLAWFRKQMLISGVGPSRIDIVTGWGRRSRVTGTSLVRQAVQELLHMF 820
           MS G A   +   L   R  +      P  + I+TGWG+ S+V G+S +R+ ++ LL   
Sbjct: 753 MSCGAAQAMVHAWLLNVRSIVFEGRAMPEFLSILTGWGKHSKVAGSSTLRRVIEALLLSI 812

Query: 821 SFPFFTENGNSGCFVGCGEPLNKWLLQSYVDRMHLL 856
             PF  E  N G FV     ++ WL +S    + LL
Sbjct: 813 GAPFQAERFNIGRFVSPSALVSAWLRESGTINILLL 848



 Score =  126 bits (317), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 76/263 (28%), Positives = 131/263 (49%)

Query: 385 QMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAG 444
           QM++DG  P+  T+N L+ +  RA +L +A  VF +M  +G   D  TY T +D   K G
Sbjct: 305 QMLQDGLCPDRKTFNSLLAACSRAGHLEDARTVFDEMIHLGSGRDIYTYNTFVDAICKCG 364

Query: 445 FLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYN 504
            + +A+ +   M+A    P+  TYS +++   K      A +L  +M +     + V YN
Sbjct: 365 NMGLALQVVLDMEANNAKPNVVTYSTLMDGFSKLEKYDEALKLREKMKSLRIQLDRVCYN 424

Query: 505 IMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRK 564
            ++A+  K   Y     +  +M+  G E D VTY+ ++   G  G LD    +  +MR +
Sbjct: 425 TLLAIYVKTGKYDEIATVCEEMEKLGIEKDTVTYNSLINGYGKQGRLDMVAFLVQDMRAQ 484

Query: 565 NWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDA 624
              P    Y  L+D++ KAG    A+  Y    ++GL+ +V   +S +    + G +  A
Sbjct: 485 GVAPSVLTYSTLIDIYSKAGMHGDAFNVYLDFKESGLKADVVLFSSFIDTLAKNGLVECA 544

Query: 625 YHLLQGMLNLGLKPSLQTYTLLL 647
             LL  M+ +G+KP++ TY  ++
Sbjct: 545 LSLLDEMMKMGIKPNVVTYNTII 567



 Score =  124 bits (311), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 97/367 (26%), Positives = 168/367 (45%), Gaps = 26/367 (7%)

Query: 364 TTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQV 423
           T  +G LG+  +     +  D  +       V  ++ LI +Y R+    EA+ V + M+ 
Sbjct: 213 TAAIGALGKMGRPDLARRAFDTGIAGSYGNTVFAHSALISAYARSGLATEAMGVLESMKG 272

Query: 424 VGCEPDRVTYCTLIDIHAKAGF-LDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQ 482
            G  P  V+Y  +ID   K G  L   +  +++M   GL PD  T++ ++    +AGHL+
Sbjct: 273 AGLRPTTVSYNAVIDACGKGGVDLRFTLGYFRQMLQDGLCPDRKTFNSLLAACSRAGHLE 332

Query: 483 AAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVM 542
            A  +F EM++ G   ++ TYN  +    K  N   AL++  DM+    +P+ VTYS +M
Sbjct: 333 DARTVFDEMIHLGSGRDIYTYNTFVDAICKCGNMGLALQVVLDMEANNAKPNVVTYSTLM 392

Query: 543 EVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLR 602
           +        DEA  +  +M+      D   Y  L+ ++ K G   +     E M + G+ 
Sbjct: 393 DGFSKLEKYDEALKLREKMKSLRIQLDRVCYNTLLAIYVKTGKYDEIATVCEEMEKLGIE 452

Query: 603 PNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGFC 662
            +  T NSL++ + + G+L     L+Q M   G+ PS+ TY+ L+   ++A    D    
Sbjct: 453 KDTVTYNSLINGYGKQGRLDMVAFLVQDMRAQGVAPSVLTYSTLIDIYSKAGMHGDAFNV 512

Query: 663 HELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRESKRGLVD---AVVDF 719
           +     SG  A + L S                SF++ +      +K GLV+   +++D 
Sbjct: 513 YLDFKESGLKADVVLFS----------------SFIDTL------AKNGLVECALSLLDE 550

Query: 720 LHKSGLK 726
           + K G+K
Sbjct: 551 MMKMGIK 557



 Score = 65.9 bits (159), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 54/227 (23%), Positives = 96/227 (42%), Gaps = 16/227 (7%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           +++G K D   +++ +  L +         LLD+M++ G +PNVVTYN +I ++G++   
Sbjct: 517 KESGLKADVVLFSSFIDTLAKNGLVECALSLLDEMMKMGIKPNVVTYNTIIDAFGKSKIF 576

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAM----------DMYKKMQAAGL 461
            E       M +VG    +V   T   I       DV M          ++++KM   G+
Sbjct: 577 TEEDSDIGDMGIVGVYGGQVVRVTNPVIRGGRSATDVRMRRSQELFFILELFQKMVQQGV 636

Query: 462 SPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARN-YQSAL 520
            P+  T+S I+N   +    + A  L    + Q  + +   Y +   L    R  +  A 
Sbjct: 637 RPNVVTFSAILNACSRCNSFEDAALL----LEQLRLFDNSVYGVAYGLLMGHREAWSQAR 692

Query: 521 KLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAE-MRRKNW 566
            L+  +           Y+ + +VL H G    A+ V  E + R+ W
Sbjct: 693 SLFNQLGRMDSPTSSAFYNALTDVLWHFGQRQGAQQVVLEGVNRRVW 739


>gi|357123295|ref|XP_003563347.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g18940-like [Brachypodium distachyon]
          Length = 800

 Score =  169 bits (428), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 114/403 (28%), Positives = 193/403 (47%), Gaps = 6/403 (1%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           R AG + D  T +T++   GR           + +   G  P VVTYN L+  +G+A   
Sbjct: 250 RAAGVEPDGFTASTVIAACGRDGLVDEAVAFFEDLKSRGHVPCVVTYNALLQVFGKAGNY 309

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
            EAL V K+M+  GC+PD VTY  L   +A+AGF + A      M + G+ P+ FTY+ I
Sbjct: 310 MEALRVLKEMEESGCKPDAVTYNELAGSYARAGFYEEAAKCLDTMVSKGILPNAFTYNTI 369

Query: 472 INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF 531
           +   G AG +  A  LF  M   G IP + TYN+++ +  K   +   L++  +M  +G 
Sbjct: 370 MTAYGNAGKVDEALALFDWMKKNGFIPYVNTYNLILGMLGKKSRFNVMLEMLGEMSRSGC 429

Query: 532 EPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWE 591
            P++VT++ ++ V G  G       V   M+          +  L+  +G+ G+   A++
Sbjct: 430 TPNRVTWNTMLAVCGKRGMEGYVTRVLERMKSCGVELCRDTFNTLISAYGRCGSRANAFK 489

Query: 592 WYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCT 651
            Y+ M  AG  P + T N+LLS   R G  + A  ++  M N G KP+  +Y+LLL C  
Sbjct: 490 MYDEMTAAGFTPCLTTYNALLSVLSRQGDWTAAQSIINKMKNEGFKPNDMSYSLLLQCHA 549

Query: 652 EARSPYDM-GFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRESKR 710
           +  +   +     E+   +  P+ + L ++       + +     +F E+M    R  K 
Sbjct: 550 KGGNAAGIEAIEKEVYEGTVFPSWVILRTLVISNFKCRRLEGIERAFQEVMA---RGHKP 606

Query: 711 GLV--DAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAVKEKGM 751
            LV  ++++    K+G+  +AG +++   Q  + PD +    M
Sbjct: 607 DLVIFNSMLSMYAKNGMYRKAGEMFDSIKQGGLSPDLITYNSM 649



 Score =  149 bits (376), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 87/322 (27%), Positives = 163/322 (50%), Gaps = 12/322 (3%)

Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLI 402
           AL  F+W+++  GF    +TY  ++G+LG+  +F  + ++L +M R GC PN VT+N ++
Sbjct: 382 ALALFDWMKKN-GFIPYVNTYNLILGMLGKKSRFNVMLEMLGEMSRSGCTPNRVTWNTML 440

Query: 403 HSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLS 462
              G+         V ++M+  G E  R T+ TLI  + + G    A  MY +M AAG +
Sbjct: 441 AVCGKRGMEGYVTRVLERMKSCGVELCRDTFNTLISAYGRCGSRANAFKMYDEMTAAGFT 500

Query: 463 PDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKL 522
           P   TY+ +++ L + G   AA  +  +M N+G  PN ++Y++++   AK  N      +
Sbjct: 501 PCLTTYNALLSVLSRQGDWTAAQSIINKMKNEGFKPNDMSYSLLLQCHAKGGNAAGIEAI 560

Query: 523 YRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGK 582
            +++      P  V    ++     C  L+  E  F E+  +   PD  ++  ++ ++ K
Sbjct: 561 EKEVYEGTVFPSWVILRTLVISNFKCRRLEGIERAFQEVMARGHKPDLVIFNSMLSMYAK 620

Query: 583 AGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQT 642
            G  RKA E ++++ Q GL P++ T NS++  + +  +  +A  +L+ +    LKP + +
Sbjct: 621 NGMYRKAGEMFDSIKQGGLSPDLITYNSMMDMYAKSNESWEAEKILKRLKTSQLKPDVVS 680

Query: 643 YTLLLSCCTEARSPYDMGFCHE 664
           Y  +++           GFC +
Sbjct: 681 YNTVMN-----------GFCKQ 691



 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 87/312 (27%), Positives = 153/312 (49%), Gaps = 5/312 (1%)

Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVR---DGCQPNVVTYN 399
           AL    W+R + G   D      +V  L R  Q  A+  LLD+M+         +V  Y 
Sbjct: 133 ALALVRWVRAEGG-AADAAALEMVVRTLAREGQHDAVCDLLDEMLPLPPGSPGLDVRAYT 191

Query: 400 RLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAG-FLDVAMDMYKKMQA 458
            ++H+         AL++F +++  G  P  V Y  ++D++ + G      + M ++M+A
Sbjct: 192 TVLHALSHEGRYERALELFAELKREGVAPTHVMYNVMLDVYGRMGRSWPQIVAMLEEMRA 251

Query: 459 AGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQS 518
           AG+ PD FT S +I   G+ G +  A   F ++ ++G +P +VTYN ++ +  KA NY  
Sbjct: 252 AGVEPDGFTASTVIAACGRDGLVDEAVAFFEDLKSRGHVPCVVTYNALLQVFGKAGNYME 311

Query: 519 ALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVD 578
           AL++ ++M+ +G +PD VTY+ +       G+ +EA      M  K  +P+   Y  ++ 
Sbjct: 312 ALRVLKEMEESGCKPDAVTYNELAGSYARAGFYEEAAKCLDTMVSKGILPNAFTYNTIMT 371

Query: 579 LWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKP 638
            +G AG V +A   ++ M + G  P V T N +L    +  + +    +L  M   G  P
Sbjct: 372 AYGNAGKVDEALALFDWMKKNGFIPYVNTYNLILGMLGKKSRFNVMLEMLGEMSRSGCTP 431

Query: 639 SLQTYTLLLSCC 650
           +  T+  +L+ C
Sbjct: 432 NRVTWNTMLAVC 443



 Score =  134 bits (336), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 114/455 (25%), Positives = 188/455 (41%), Gaps = 88/455 (19%)

Query: 269 ERFSKPSREMKIPAGLAPFSRHFASTGNVVESV-SRILRQWKWGPLAEEALGNTNYSMDA 327
           E F++  RE     G+AP    +    NV+  V  R+ R W       E +       D 
Sbjct: 208 ELFAELKRE-----GVAPTHVMY----NVMLDVYGRMGRSWPQIVAMLEEMRAAGVEPDG 258

Query: 328 YQANQVLKQ-----LQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKL 382
           + A+ V+       L D  VA  FF  L+ + G      TY  ++ + G+A  +    ++
Sbjct: 259 FTASTVIAACGRDGLVDEAVA--FFEDLKSR-GHVPCVVTYNALLQVFGKAGNYMEALRV 315

Query: 383 LDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAK 442
           L +M   GC+P+ VTYN L  SY RA +  EA      M   G  P+  TY T++  +  
Sbjct: 316 LKEMEESGCKPDAVTYNELAGSYARAGFYEEAAKCLDTMVSKGILPNAFTYNTIMTAYGN 375

Query: 443 AGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVT 502
           AG +D A+ ++  M+  G  P   TY++I+  LGK        ++  EM   GC PN VT
Sbjct: 376 AGKVDEALALFDWMKKNGFIPYVNTYNLILGMLGKKSRFNVMLEMLGEMSRSGCTPNRVT 435

Query: 503 YNIMIALQAK-----------------------------------ARNYQSALKLYRDMQ 527
           +N M+A+  K                                     +  +A K+Y +M 
Sbjct: 436 WNTMLAVCGKRGMEGYVTRVLERMKSCGVELCRDTFNTLISAYGRCGSRANAFKMYDEMT 495

Query: 528 NAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNV- 586
            AGF P   TY+ ++ VL   G    A+++  +M+ + + P++  Y LL+    K GN  
Sbjct: 496 AAGFTPCLTTYNALLSVLSRQGDWTAAQSIINKMKNEGFKPNDMSYSLLLQCHAKGGNAA 555

Query: 587 ------RKAWE------W----------------------YEAMLQAGLRPNVPTCNSLL 612
                 ++ +E      W                      ++ ++  G +P++   NS+L
Sbjct: 556 GIEAIEKEVYEGTVFPSWVILRTLVISNFKCRRLEGIERAFQEVMARGHKPDLVIFNSML 615

Query: 613 SAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
           S + + G    A  +   +   GL P L TY  ++
Sbjct: 616 SMYAKNGMYRKAGEMFDSIKQGGLSPDLITYNSMM 650



 Score = 89.4 bits (220), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 47/205 (22%), Positives = 101/205 (49%)

Query: 372 RARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRV 431
           + R+   I +   +++  G +P++V +N ++  Y +     +A ++F  ++  G  PD +
Sbjct: 585 KCRRLEGIERAFQEVMARGHKPDLVIFNSMLSMYAKNGMYRKAGEMFDSIKQGGLSPDLI 644

Query: 432 TYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEM 491
           TY +++D++AK+     A  + K+++ + L PD  +Y+ ++N   K G ++ A ++  EM
Sbjct: 645 TYNSMMDMYAKSNESWEAEKILKRLKTSQLKPDVVSYNTVMNGFCKQGLIKEAQRILSEM 704

Query: 492 VNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYL 551
           +  G  P +VTY+ ++   A    +  A ++   M      P ++TY  V++        
Sbjct: 705 IADGVRPCVVTYHTLVGGYASREMFSEAREVVSYMIQRNLSPMELTYRRVVDSYCKAKRF 764

Query: 552 DEAEAVFAEMRRKNWVPDEPVYGLL 576
           DEA     E+   +   D+ +   L
Sbjct: 765 DEARGFLYEIAETDRNSDQKLLSTL 789



 Score = 63.9 bits (154), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 52/208 (25%), Positives = 90/208 (43%), Gaps = 10/208 (4%)

Query: 470 VIINCLGKAGHLQAAHQLFCEMVNQGCIP------NLVTYNIMIALQAKARNYQSALKLY 523
           +++  L + G   A   L  EM+    +P      ++  Y  ++   +    Y+ AL+L+
Sbjct: 154 MVVRTLAREGQHDAVCDLLDEMLP---LPPGSPGLDVRAYTTVLHALSHEGRYERALELF 210

Query: 524 RDMQNAGFEPDKVTYSIVMEVLGHCGY-LDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGK 582
            +++  G  P  V Y+++++V G  G    +  A+  EMR     PD      ++   G+
Sbjct: 211 AELKREGVAPTHVMYNVMLDVYGRMGRSWPQIVAMLEEMRAAGVEPDGFTASTVIAACGR 270

Query: 583 AGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQT 642
            G V +A  ++E +   G  P V T N+LL  F + G   +A  +L+ M   G KP   T
Sbjct: 271 DGLVDEAVAFFEDLKSRGHVPCVVTYNALLQVFGKAGNYMEALRVLKEMEESGCKPDAVT 330

Query: 643 YTLLLSCCTEARSPYDMGFCHELMAVSG 670
           Y  L      A    +   C + M   G
Sbjct: 331 YNELAGSYARAGFYEEAAKCLDTMVSKG 358


>gi|449485308|ref|XP_004157129.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At4g31850, chloroplastic-like [Cucumis sativus]
          Length = 1113

 Score =  169 bits (428), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 98/329 (29%), Positives = 163/329 (49%), Gaps = 2/329 (0%)

Query: 323 YSMDAYQANQVLKQLQDHTVALGFFNWLRRQA--GFKHDEHTYTTMVGILGRARQFGAIN 380
           + ++AY  N ++  L             RR    G K    TY+ ++  LG+ R    + 
Sbjct: 188 FVLNAYSYNGLIHLLIQSGFCGEALEVYRRMVSEGLKPSLKTYSALMVALGKKRDSEMVM 247

Query: 381 KLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIH 440
            LL +M   G +PNV T+   I   GRA  ++EA ++F++M   GC PD VTY  LID  
Sbjct: 248 VLLKEMEDLGLRPNVYTFTICIRVLGRAGKIDEAYEIFRRMDDEGCGPDLVTYTVLIDAL 307

Query: 441 AKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNL 500
             AG L+ A +++ KM+A G  PD   Y  +++     G L    + + +M   G +P++
Sbjct: 308 CNAGQLENAKELFVKMKANGHKPDQVIYITLLDKFNDFGDLDTFKEFWSQMEADGYMPDV 367

Query: 501 VTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAE 560
           VT+ I++ +  KAR++  A   +  M+  G  P+  TY+ ++  L   G +++A  +   
Sbjct: 368 VTFTILVDVLCKARDFDEAFATFDVMRKQGILPNLHTYNTLICGLLRAGRIEDALKLLDT 427

Query: 561 MRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQ 620
           M      P    Y   +D +GK+G   KA E +E M   G+ PN+  CN+ L +   +G+
Sbjct: 428 MESVGVQPTAYTYITFIDYFGKSGETGKAVETFEKMKAKGIVPNIVACNASLYSLAEMGR 487

Query: 621 LSDAYHLLQGMLNLGLKPSLQTYTLLLSC 649
           L +A  +  G+   GL P   TY +++ C
Sbjct: 488 LREAKTMFNGLRENGLAPDSVTYNMMMKC 516



 Score =  168 bits (426), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 92/304 (30%), Positives = 171/304 (56%), Gaps = 7/304 (2%)

Query: 347 FNWLRRQAGFKHDEHTYTTM---VGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIH 403
           F +++++   + D  TY T+   + I G  RQ   +   L++M + G   N  +YN LIH
Sbjct: 145 FEFMQKKI-IRRDLDTYLTIFKALSIRGGLRQMTTV---LNKMRKAGFVLNAYSYNGLIH 200

Query: 404 SYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSP 463
              ++ +  EAL+V+++M   G +P   TY  L+    K    ++ M + K+M+  GL P
Sbjct: 201 LLIQSGFCGEALEVYRRMVSEGLKPSLKTYSALMVALGKKRDSEMVMVLLKEMEDLGLRP 260

Query: 464 DTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLY 523
           + +T+++ I  LG+AG +  A+++F  M ++GC P+LVTY ++I     A   ++A +L+
Sbjct: 261 NVYTFTICIRVLGRAGKIDEAYEIFRRMDDEGCGPDLVTYTVLIDALCNAGQLENAKELF 320

Query: 524 RDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKA 583
             M+  G +PD+V Y  +++     G LD  +  +++M    ++PD   + +LVD+  KA
Sbjct: 321 VKMKANGHKPDQVIYITLLDKFNDFGDLDTFKEFWSQMEADGYMPDVVTFTILVDVLCKA 380

Query: 584 GNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTY 643
            +  +A+  ++ M + G+ PN+ T N+L+   LR G++ DA  LL  M ++G++P+  TY
Sbjct: 381 RDFDEAFATFDVMRKQGILPNLHTYNTLICGLLRAGRIEDALKLLDTMESVGVQPTAYTY 440

Query: 644 TLLL 647
              +
Sbjct: 441 ITFI 444



 Score =  166 bits (419), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 94/295 (31%), Positives = 158/295 (53%)

Query: 352  RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
            +  G   D  T+  ++ + G++ +   + +L  +M+   C+P+ +TYN +I S  ++N L
Sbjct: 815  KNVGCAPDAFTFNMLLAVHGKSGKITELFELYKEMISRRCKPDAITYNIVISSLAKSNNL 874

Query: 412  NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
            ++ALD F  +      P   TY  LID  AK G L+ AM ++++M   G  P+   ++++
Sbjct: 875  DKALDFFYDLVSSDFRPTPRTYGPLIDGLAKVGRLEEAMRLFEEMSDYGCKPNCAIFNIL 934

Query: 472  INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF 531
            IN  GK G  + A QLF  MVN+G  P+L +Y I++     A     AL  + ++++ G 
Sbjct: 935  INGYGKIGDTETACQLFKRMVNEGIRPDLKSYTILVDCLCLAGRVDEALYYFNELKSTGL 994

Query: 532  EPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWE 591
            +PD + Y+ ++  LG    ++EA A++ EMR +  VPD   Y  L+   G AG V +A  
Sbjct: 995  DPDFIAYNRIINGLGKSQRMEEALALYNEMRNRGIVPDLYTYNSLMLNLGLAGMVEQAKR 1054

Query: 592  WYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLL 646
             YE +  AGL P+V T N+L+  +        AY + + M+  G  P++ TY  L
Sbjct: 1055 MYEELQLAGLEPDVFTYNALIRGYSLSENPEHAYTVYKNMMVDGCNPNIGTYAQL 1109



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 104/338 (30%), Positives = 168/338 (49%), Gaps = 4/338 (1%)

Query: 349 WLRRQA-GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGR 407
           W + +A G+  D  T+T +V +L +AR F       D M + G  PN+ TYN LI    R
Sbjct: 355 WSQMEADGYMPDVVTFTILVDVLCKARDFDEAFATFDVMRKQGILPNLHTYNTLICGLLR 414

Query: 408 ANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFT 467
           A  + +AL +   M+ VG +P   TY T ID   K+G    A++ ++KM+A G+ P+   
Sbjct: 415 AGRIEDALKLLDTMESVGVQPTAYTYITFIDYFGKSGETGKAVETFEKMKAKGIVPNIVA 474

Query: 468 YSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQ 527
            +  +  L + G L+ A  +F  +   G  P+ VTYN+M+   +K      A+ L  +M 
Sbjct: 475 CNASLYSLAEMGRLREAKTMFNGLRENGLAPDSVTYNMMMKCYSKVGQVDEAVNLLSEMI 534

Query: 528 NAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVR 587
             G EPD +  + +++ L   G +DEA  +F  M+     P    Y  L+   GK G V+
Sbjct: 535 RNGCEPDVIVVNSLIDSLYKAGRVDEAWQMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQ 594

Query: 588 KAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTY-TLL 646
           KA E +E+M+     PN  + N+LL  F +  ++  A  +   M  +  KP + TY T++
Sbjct: 595 KAIELFESMIXKKCSPNTISFNTLLDCFCKNDEVELALKMFSKMTVMDCKPDVLTYNTVI 654

Query: 647 LSCCTEARSPYDMGFCHELMAVSGHPAHMFLLSMPSPG 684
                E +  +   F H+L   S HP H+ + ++  PG
Sbjct: 655 YGLIKENKVNHAFWFFHQLKK-SMHPDHVTICTL-LPG 690



 Score =  156 bits (395), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 95/339 (28%), Positives = 167/339 (49%)

Query: 332  QVLKQLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGC 391
            +VL + +    A   F+   ++ G      +Y  ++G L           L   M   GC
Sbjct: 760  RVLCKHKRELYAYQIFDKFTKKLGISPTLASYNCLIGELLEVHYTEKAWDLFKDMKNVGC 819

Query: 392  QPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMD 451
             P+  T+N L+  +G++  + E  +++K+M    C+PD +TY  +I   AK+  LD A+D
Sbjct: 820  APDAFTFNMLLAVHGKSGKITELFELYKEMISRRCKPDAITYNIVISSLAKSNNLDKALD 879

Query: 452  MYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQA 511
             +  + ++   P   TY  +I+ L K G L+ A +LF EM + GC PN   +NI+I    
Sbjct: 880  FFYDLVSSDFRPTPRTYGPLIDGLAKVGRLEEAMRLFEEMSDYGCKPNCAIFNILINGYG 939

Query: 512  KARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEP 571
            K  + ++A +L++ M N G  PD  +Y+I+++ L   G +DEA   F E++     PD  
Sbjct: 940  KIGDTETACQLFKRMVNEGIRPDLKSYTILVDCLCLAGRVDEALYYFNELKSTGLDPDFI 999

Query: 572  VYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGM 631
             Y  +++  GK+  + +A   Y  M   G+ P++ T NSL+      G +  A  + + +
Sbjct: 1000 AYNRIINGLGKSQRMEEALALYNEMRNRGIVPDLYTYNSLMLNLGLAGMVEQAKRMYEEL 1059

Query: 632  LNLGLKPSLQTYTLLLSCCTEARSPYDMGFCHELMAVSG 670
               GL+P + TY  L+   + + +P      ++ M V G
Sbjct: 1060 QLAGLEPDVFTYNALIRGYSLSENPEHAYTVYKNMMVDG 1098



 Score =  151 bits (381), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 90/295 (30%), Positives = 145/295 (49%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           G K D+  Y T++             +   QM  DG  P+VVT+  L+    +A   +EA
Sbjct: 327 GHKPDQVIYITLLDKFNDFGDLDTFKEFWSQMEADGYMPDVVTFTILVDVLCKARDFDEA 386

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
              F  M+  G  P+  TY TLI    +AG ++ A+ +   M++ G+ P  +TY   I+ 
Sbjct: 387 FATFDVMRKQGILPNLHTYNTLICGLLRAGRIEDALKLLDTMESVGVQPTAYTYITFIDY 446

Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPD 534
            GK+G    A + F +M  +G +PN+V  N  +   A+    + A  ++  ++  G  PD
Sbjct: 447 FGKSGETGKAVETFEKMKAKGIVPNIVACNASLYSLAEMGRLREAKTMFNGLRENGLAPD 506

Query: 535 KVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYE 594
            VTY+++M+     G +DEA  + +EM R    PD  V   L+D   KAG V +AW+ ++
Sbjct: 507 SVTYNMMMKCYSKVGQVDEAVNLLSEMIRNGCEPDVIVVNSLIDSLYKAGRVDEAWQMFD 566

Query: 595 AMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSC 649
            M    L P V T N+LLS   + G++  A  L + M+     P+  ++  LL C
Sbjct: 567 RMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIELFESMIXKKCSPNTISFNTLLDC 621



 Score =  119 bits (297), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 84/327 (25%), Positives = 150/327 (45%), Gaps = 37/327 (11%)

Query: 333 VLKQLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQ 392
           VL + +D   A   F+ +R+Q G   + HTY T++  L RA +     KLLD M   G Q
Sbjct: 376 VLCKARDFDEAFATFDVMRKQ-GILPNLHTYNTLICGLLRAGRIEDALKLLDTMESVGVQ 434

Query: 393 PNVVTYNRLIHSYGRANYLNEALDVFKQMQ-------VVGCE------------------ 427
           P   TY   I  +G++    +A++ F++M+       +V C                   
Sbjct: 435 PTAYTYITFIDYFGKSGETGKAVETFEKMKAKGIVPNIVACNASLYSLAEMGRLREAKTM 494

Query: 428 ----------PDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGK 477
                     PD VTY  ++  ++K G +D A+++  +M   G  PD    + +I+ L K
Sbjct: 495 FNGLRENGLAPDSVTYNMMMKCYSKVGQVDEAVNLLSEMIRNGCEPDVIVVNSLIDSLYK 554

Query: 478 AGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVT 537
           AG +  A Q+F  M +    P +VTYN +++   K    Q A++L+  M      P+ ++
Sbjct: 555 AGRVDEAWQMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIELFESMIXKKCSPNTIS 614

Query: 538 YSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAML 597
           ++ +++       ++ A  +F++M   +  PD   Y  ++    K   V  A+ W+   L
Sbjct: 615 FNTLLDCFCKNDEVELALKMFSKMTVMDCKPDVLTYNTVIYGLIKENKVNHAF-WFFHQL 673

Query: 598 QAGLRPNVPTCNSLLSAFLRVGQLSDA 624
           +  + P+  T  +LL   ++ GQ+ DA
Sbjct: 674 KKSMHPDHVTICTLLPGLVKCGQIGDA 700



 Score =  112 bits (279), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 87/336 (25%), Positives = 151/336 (44%), Gaps = 12/336 (3%)

Query: 417 VFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLG 476
           VF+ MQ      D  TY T+    +  G L     +  KM+ AG   + ++Y+ +I+ L 
Sbjct: 144 VFEFMQKKIIRRDLDTYLTIFKALSIRGGLRQMTTVLNKMRKAGFVLNAYSYNGLIHLLI 203

Query: 477 KAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKV 536
           ++G    A +++  MV++G  P+L TY+ ++    K R+ +  + L ++M++ G  P+  
Sbjct: 204 QSGFCGEALEVYRRMVSEGLKPSLKTYSALMVALGKKRDSEMVMVLLKEMEDLGLRPNVY 263

Query: 537 TYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAM 596
           T++I + VLG  G +DEA  +F  M  +   PD   Y +L+D    AG +  A E +  M
Sbjct: 264 TFTICIRVLGRAGKIDEAYEIFRRMDDEGCGPDLVTYTVLIDALCNAGQLENAKELFVKM 323

Query: 597 LQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSP 656
              G +P+     +LL  F   G L         M   G  P + T+T+L+    +AR  
Sbjct: 324 KANGHKPDQVIYITLLDKFNDFGDLDTFKEFWSQMEADGYMPDVVTFTILVDVLCKARD- 382

Query: 657 YDMGFC-HELMAVSG-----HPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRESKR 710
           +D  F   ++M   G     H  +  +  +   G     + D +   L+ M S   +   
Sbjct: 383 FDEAFATFDVMRKQGILPNLHTYNTLICGLLRAG----RIEDAL-KLLDTMESVGVQPTA 437

Query: 711 GLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAV 746
                 +D+  KSG   +A   +E    K + P+ V
Sbjct: 438 YTYITFIDYFGKSGETGKAVETFEKMKAKGIVPNIV 473



 Score = 62.8 bits (151), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 39/131 (29%), Positives = 70/131 (53%), Gaps = 1/131 (0%)

Query: 343  ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLI 402
            AL +FN L+   G   D   Y  ++  LG++++      L ++M   G  P++ TYN L+
Sbjct: 982  ALYYFNELK-STGLDPDFIAYNRIINGLGKSQRMEEALALYNEMRNRGIVPDLYTYNSLM 1040

Query: 403  HSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLS 462
             + G A  + +A  +++++Q+ G EPD  TY  LI  ++ +   + A  +YK M   G +
Sbjct: 1041 LNLGLAGMVEQAKRMYEELQLAGLEPDVFTYNALIRGYSLSENPEHAYTVYKNMMVDGCN 1100

Query: 463  PDTFTYSVIIN 473
            P+  TY+ + N
Sbjct: 1101 PNIGTYAQLPN 1111


>gi|302761054|ref|XP_002963949.1| hypothetical protein SELMODRAFT_166434 [Selaginella moellendorffii]
 gi|300167678|gb|EFJ34282.1| hypothetical protein SELMODRAFT_166434 [Selaginella moellendorffii]
          Length = 1365

 Score =  169 bits (428), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 87/294 (29%), Positives = 159/294 (54%), Gaps = 1/294 (0%)

Query: 355 GFKHDEHTYTTMVGILGRA-RQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNE 413
           G + D  T+  ++    R   Q G  + LL  +   G +P+ +TYN LI +    N L++
Sbjct: 155 GCRPDLVTFNIVIKARTRGGMQEGLASSLLQDVYAAGLRPDTITYNTLISACSLNNRLSD 214

Query: 414 ALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIIN 473
           A+ +F++MQ  GC+PD  TY  +I ++ +AG ++ A  +++ MQ  G +PD  TY+ +++
Sbjct: 215 AILIFEEMQRQGCDPDIWTYNAMISVYGRAGRVEAASSIFRIMQEQGFTPDAVTYNSVLH 274

Query: 474 CLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEP 533
              + G ++   ++   M +  C  + +TYN MI +  KA  ++ A +LY  M+  G  P
Sbjct: 275 AFARDGRIEEVERIRGMMRDARCSSDEITYNTMIHMYGKAGMHRKAEELYVQMKEEGRCP 334

Query: 534 DKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWY 593
           D VT++++++ LG  G+++EA A+F +M +    P    +  ++  + KA     A   Y
Sbjct: 335 DSVTFTVLIDTLGKAGFVNEAAAMFEDMLKSQVRPTLQAFSAMICAYAKADMFTDAEHTY 394

Query: 594 EAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
             ML+AG+RP++   + +L  F + G       L + M+  GLKP L  Y +++
Sbjct: 395 SCMLRAGVRPDLLAYSVMLDVFFKAGMPEKCIILYKAMVGSGLKPELSVYAIMV 448



 Score =  161 bits (408), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 89/312 (28%), Positives = 168/312 (53%), Gaps = 3/312 (0%)

Query: 361 HTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEAL--DVF 418
             Y +++ +  R   + ++ +LL +M   GC+P++VT+N +I +  R   + E L   + 
Sbjct: 126 QVYNSLMSVYARHGDWNSVQQLLCRMQDRGCRPDLVTFNIVIKARTRGG-MQEGLASSLL 184

Query: 419 KQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKA 478
           + +   G  PD +TY TLI   +    L  A+ ++++MQ  G  PD +TY+ +I+  G+A
Sbjct: 185 QDVYAAGLRPDTITYNTLISACSLNNRLSDAILIFEEMQRQGCDPDIWTYNAMISVYGRA 244

Query: 479 GHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTY 538
           G ++AA  +F  M  QG  P+ VTYN ++   A+    +   ++   M++A    D++TY
Sbjct: 245 GRVEAASSIFRIMQEQGFTPDAVTYNSVLHAFARDGRIEEVERIRGMMRDARCSSDEITY 304

Query: 539 SIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQ 598
           + ++ + G  G   +AE ++ +M+ +   PD   + +L+D  GKAG V +A   +E ML+
Sbjct: 305 NTMIHMYGKAGMHRKAEELYVQMKEEGRCPDSVTFTVLIDTLGKAGFVNEAAAMFEDMLK 364

Query: 599 AGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYD 658
           + +RP +   ++++ A+ +    +DA H    ML  G++P L  Y+++L    +A  P  
Sbjct: 365 SQVRPTLQAFSAMICAYAKADMFTDAEHTYSCMLRAGVRPDLLAYSVMLDVFFKAGMPEK 424

Query: 659 MGFCHELMAVSG 670
               ++ M  SG
Sbjct: 425 CIILYKAMVGSG 436



 Score =  149 bits (377), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 128/564 (22%), Positives = 221/564 (39%), Gaps = 71/564 (12%)

Query: 352  RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
            +Q GF  +   Y+ ++        F    + LD MV  G QPN    N ++ ++GRA   
Sbjct: 673  QQHGFAGNTSAYSALLSAYAETGNFERATRALDNMVAAGLQPNATCANYVLEAFGRAGKA 732

Query: 412  NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSP-------- 463
             E  + F+++  +G  P+  T+  +    ++ G L+ A  MY++M+ AG SP        
Sbjct: 733  KEISEFFQRLPEMGISPNSRTFVVIFHAFSRNGNLEEARSMYRQMKEAGFSPSIQVFKAL 792

Query: 464  ---------------------------DTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGC 496
                                       D   Y+ +I+   K G  + A  +F  M   GC
Sbjct: 793  LALYSRETVEIDAEELVKDIKKAGLELDIDIYNHMISLYSKLGSYRNAALVFKGMQEIGC 852

Query: 497  IPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEA 556
             P+  T+N +I L ++ +  Q A  L R+M   G  P+  TY+ ++   G     ++AE 
Sbjct: 853  SPDATTFNTLIMLYSRNQMVQEAQALLREMIKTGNAPNISTYTTLISAYGRLQAYEDAEL 912

Query: 557  VFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFL 616
            VF  +      PD   Y ++++++ KAG  RK  E  E M   G  P++ T + L+ ++ 
Sbjct: 913  VFKSIAETGCKPDATAYNVMINVYRKAGEHRKIEEIIEQMKVDGFEPSLTTIHMLMDSYG 972

Query: 617  RVGQLSDAYHLLQGMLNLGLKPSLQTYT-------------------------------L 645
            + G    A  +L+ +  +G+ P    YT                               +
Sbjct: 973  KGGATGKAEEVLETLPEIGMSPDAIHYTSIINSHLNNKDYLSAVIWLRKMTDACVRPTHV 1032

Query: 646  LLSCCTEARSPYDMGFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSED 705
             ++C   A S  +    H LM +       F L +         V   +    + +    
Sbjct: 1033 TITCFVGAASVCERS-SHALMLLKALSEAGFSLPLRLMTECTPKVVQDMQDIFDQLQESG 1091

Query: 706  RESKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAVKEKGMSYWLINLHVMSDGT 765
             E+ +G+V+ ++D L        A  V+ VA + N+Y   +       W  +   +S G 
Sbjct: 1092 PEACQGVVNVLMDLLWAFRQCATAALVFAVAIESNIYTQVLARVKDRNWGADFRRLSPGA 1151

Query: 766  AVIALSRTLAWFRKQMLI-SGVGPSRIDIVTGWGRRSRVTGTSLVRQAVQELLHMFSFPF 824
            +++AL   L   +   L  S V P  I I  G    S++   + VR  ++  L     PF
Sbjct: 1152 SLVALILWLDQMQDASLQGSPVPPKSIQIDIG---SSKLNNQASVRNTIKAHLWQMGSPF 1208

Query: 825  FTENGNSGCFVGCGEPLNKWLLQS 848
                  +G  V     L  WL +S
Sbjct: 1209 LPSKTRAGVLVAKSHALCMWLKES 1232



 Score =  139 bits (350), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 91/331 (27%), Positives = 157/331 (47%), Gaps = 33/331 (9%)

Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLI 402
           A+  F  ++RQ G   D  TY  M+ + GRA +  A + +   M   G  P+ VTYN ++
Sbjct: 215 AILIFEEMQRQ-GCDPDIWTYNAMISVYGRAGRVEAASSIFRIMQEQGFTPDAVTYNSVL 273

Query: 403 HSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLS 462
           H++ R   + E   +   M+   C  D +TY T+I ++ KAG    A ++Y +M+  G  
Sbjct: 274 HAFARDGRIEEVERIRGMMRDARCSSDEITYNTMIHMYGKAGMHRKAEELYVQMKEEGRC 333

Query: 463 PDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKL 522
           PD+ T++V+I+ LGKAG +  A  +F +M+     P L  ++ MI   AKA  +  A   
Sbjct: 334 PDSVTFTVLIDTLGKAGFVNEAAAMFEDMLKSQVRPTLQAFSAMICAYAKADMFTDAEHT 393

Query: 523 YRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGK 582
           Y  M  AG  PD + YS++++V    G  ++   ++  M      P+  VY ++V ++ +
Sbjct: 394 YSCMLRAGVRPDLLAYSVMLDVFFKAGMPEKCIILYKAMVGSGLKPELSVYAIMVRVFYQ 453

Query: 583 AGNVRKAWEWYEAMLQA------------------------------GLRPNVPTCNSLL 612
             +V +     + M+Q+                              G+   V T N +L
Sbjct: 454 KSSVAEIENLSKEMVQSSASLAALSSTLAKGGFYAEAAVVLKISFAQGVAVKVETLNDVL 513

Query: 613 SAFLRVGQLSDAYHLLQGMLNLGLKPSLQTY 643
            AF   G+LSDA  L+  + +  ++PS+  +
Sbjct: 514 GAFEASGKLSDARDLVHAVSS--IEPSVAAH 542



 Score =  135 bits (341), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 78/280 (27%), Positives = 139/280 (49%)

Query: 354 AGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNE 413
           AG + D  TY T++       +      + ++M R GC P++ TYN +I  YGRA  +  
Sbjct: 190 AGLRPDTITYNTLISACSLNNRLSDAILIFEEMQRQGCDPDIWTYNAMISVYGRAGRVEA 249

Query: 414 ALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIIN 473
           A  +F+ MQ  G  PD VTY +++   A+ G ++    +   M+ A  S D  TY+ +I+
Sbjct: 250 ASSIFRIMQEQGFTPDAVTYNSVLHAFARDGRIEEVERIRGMMRDARCSSDEITYNTMIH 309

Query: 474 CLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEP 533
             GKAG  + A +L+ +M  +G  P+ VT+ ++I    KA     A  ++ DM  +   P
Sbjct: 310 MYGKAGMHRKAEELYVQMKEEGRCPDSVTFTVLIDTLGKAGFVNEAAAMFEDMLKSQVRP 369

Query: 534 DKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWY 593
               +S ++          +AE  ++ M R    PD   Y +++D++ KAG   K    Y
Sbjct: 370 TLQAFSAMICAYAKADMFTDAEHTYSCMLRAGVRPDLLAYSVMLDVFFKAGMPEKCIILY 429

Query: 594 EAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLN 633
           +AM+ +GL+P +     ++  F +   +++  +L + M+ 
Sbjct: 430 KAMVGSGLKPELSVYAIMVRVFYQKSSVAEIENLSKEMVQ 469



 Score =  116 bits (291), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 101/433 (23%), Positives = 190/433 (43%), Gaps = 27/433 (6%)

Query: 401  LIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAG 460
            +I SYG+      A  VF+ +Q  G   +   Y  L+  +A+ G  + A      M AAG
Sbjct: 652  IIASYGKLKLWQNAEIVFRDLQQHGFAGNTSAYSALLSAYAETGNFERATRALDNMVAAG 711

Query: 461  LSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSAL 520
            L P+    + ++   G+AG  +   + F  +   G  PN  T+ ++    ++  N + A 
Sbjct: 712  LQPNATCANYVLEAFGRAGKAKEISEFFQRLPEMGISPNSRTFVVIFHAFSRNGNLEEAR 771

Query: 521  KLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLW 580
             +YR M+ AGF P    +  ++ +        +AE +  ++++     D  +Y  ++ L+
Sbjct: 772  SMYRQMKEAGFSPSIQVFKALLALYSRETVEIDAEELVKDIKKAGLELDIDIYNHMISLY 831

Query: 581  GKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSL 640
             K G+ R A   ++ M + G  P+  T N+L+  + R   + +A  LL+ M+  G  P++
Sbjct: 832  SKLGSYRNAALVFKGMQEIGCSPDATTFNTLIMLYSRNQMVQEAQALLREMIKTGNAPNI 891

Query: 641  QTYTLLLSCCTEARSPYDMGFCHELMAVSG----HPAHMFLLSMPSPGPDGQNVRDHVGS 696
             TYT L+S     ++  D     + +A +G      A+  ++++     + + + +    
Sbjct: 892  STYTTLISAYGRLQAYEDAELVFKSIAETGCKPDATAYNVMINVYRKAGEHRKIEE---- 947

Query: 697  FLEMMHSEDRESKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAVKEKGMSYWLI 756
             +E M  +  E     +  ++D   K G   +A  V E   +  + PDA+        +I
Sbjct: 948  IIEQMKVDGFEPSLTTIHMLMDSYGKGGATGKAEEVLETLPEIGMSPDAIHYTS----II 1003

Query: 757  NLHVMSDG--TAVIALSRTLAWFRKQMLISGVGPSRIDIVTGWGRRS---RVTGTSLVRQ 811
            N H+ +    +AVI       W RK M  + V P+ + I    G  S   R +   ++ +
Sbjct: 1004 NSHLNNKDYLSAVI-------WLRK-MTDACVRPTHVTITCFVGAASVCERSSHALMLLK 1055

Query: 812  AVQELLHMFSFPF 824
            A+ E    FS P 
Sbjct: 1056 ALSE--AGFSLPL 1066



 Score = 90.1 bits (222), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 61/259 (23%), Positives = 113/259 (43%), Gaps = 2/259 (0%)

Query: 392 QPNVVT--YNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVA 449
           +P+V    Y RL     +A   +EA +  +  Q  G          L+  + +AG  D A
Sbjct: 536 EPSVAAHLYKRLAVMLAKAGRFSEAEEEMRTSQTYGQVQVSDFLKVLVASYDRAGMQDEA 595

Query: 450 MDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIAL 509
           +  +  M   GL  D       + C  + G    AH+L  + ++   + +   +  +IA 
Sbjct: 596 LARFLDMTTEGLEMDAEVLQTAVMCYCRKGFAFVAHELLIDCLHAFDVKDSAMHVAIIAS 655

Query: 510 QAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPD 569
             K + +Q+A  ++RD+Q  GF  +   YS ++      G  + A      M      P+
Sbjct: 656 YGKLKLWQNAEIVFRDLQQHGFAGNTSAYSALLSAYAETGNFERATRALDNMVAAGLQPN 715

Query: 570 EPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQ 629
                 +++ +G+AG  ++  E+++ + + G+ PN  T   +  AF R G L +A  + +
Sbjct: 716 ATCANYVLEAFGRAGKAKEISEFFQRLPEMGISPNSRTFVVIFHAFSRNGNLEEARSMYR 775

Query: 630 GMLNLGLKPSLQTYTLLLS 648
            M   G  PS+Q +  LL+
Sbjct: 776 QMKEAGFSPSIQVFKALLA 794


>gi|449453081|ref|XP_004144287.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
           mitochondrial-like [Cucumis sativus]
 gi|449489420|ref|XP_004158306.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
           mitochondrial-like [Cucumis sativus]
          Length = 720

 Score =  169 bits (427), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 96/319 (30%), Positives = 158/319 (49%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
            ++G   DEHTY  +V       ++ +   LL QM     QPN   ++R++ SY      
Sbjct: 378 EKSGLSPDEHTYGLLVDAYANVGRWESARHLLKQMEARNVQPNTFIFSRILASYRDRGEW 437

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
            +  +V ++M+    +PDR  Y  +ID   K   LD AM+ Y +M + G+ PD  T++ +
Sbjct: 438 QKTFEVLREMKNSNVKPDRHFYNVMIDTFGKFNCLDHAMETYDRMLSEGIEPDVVTWNTL 497

Query: 472 INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF 531
           I+C  K G+   A +LF EM  +G +P   TYNIMI    +   +     L   MQ+ G 
Sbjct: 498 IDCHRKHGYHDRAAELFEEMQERGYLPCPTTYNIMINSLGEQEKWDEVKILLGKMQSQGL 557

Query: 532 EPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWE 591
            P+ VTY+ ++++ GH G  ++A      M+     P   +Y  L++ + + G   +A  
Sbjct: 558 LPNVVTYTTLVDIYGHSGRFNDAIDCLEAMKSAGLKPSATMYNALINAFAQRGLSEQAVN 617

Query: 592 WYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCT 651
            Y  M+  GLRP++   NSL++AF    +  +A+ +LQ M    +KP + TYT L+    
Sbjct: 618 AYRVMISDGLRPSLLALNSLINAFGEDRRDIEAFSILQYMKENDVKPDVVTYTTLMKALI 677

Query: 652 EARSPYDMGFCHELMAVSG 670
                  +   +E M +SG
Sbjct: 678 RVDKFDKVPAVYEEMILSG 696



 Score =  149 bits (376), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 91/344 (26%), Positives = 161/344 (46%), Gaps = 35/344 (10%)

Query: 346 FFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSY 405
           +F  + + +G      T+  ++  LG   +      + ++M   G +P +  +N L+  Y
Sbjct: 302 YFLSMVQASGLNPKTSTFVAVISALGNHGRTEEAEAIFEEMKEGGLKPRIKAFNALLKGY 361

Query: 406 GRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDT 465
            R   L EA  +  +M+  G  PD  TY  L+D +A  G  + A  + K+M+A  + P+T
Sbjct: 362 ARKGSLKEAESIISEMEKSGLSPDEHTYGLLVDAYANVGRWESARHLLKQMEARNVQPNT 421

Query: 466 FT-----------------------------------YSVIINCLGKAGHLQAAHQLFCE 490
           F                                    Y+V+I+  GK   L  A + +  
Sbjct: 422 FIFSRILASYRDRGEWQKTFEVLREMKNSNVKPDRHFYNVMIDTFGKFNCLDHAMETYDR 481

Query: 491 MVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGY 550
           M+++G  P++VT+N +I    K   +  A +L+ +MQ  G+ P   TY+I++  LG    
Sbjct: 482 MLSEGIEPDVVTWNTLIDCHRKHGYHDRAAELFEEMQERGYLPCPTTYNIMINSLGEQEK 541

Query: 551 LDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNS 610
            DE + +  +M+ +  +P+   Y  LVD++G +G    A +  EAM  AGL+P+    N+
Sbjct: 542 WDEVKILLGKMQSQGLLPNVVTYTTLVDIYGHSGRFNDAIDCLEAMKSAGLKPSATMYNA 601

Query: 611 LLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEAR 654
           L++AF + G    A +  + M++ GL+PSL     L++   E R
Sbjct: 602 LINAFAQRGLSEQAVNAYRVMISDGLRPSLLALNSLINAFGEDR 645



 Score =  127 bits (318), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 102/425 (24%), Positives = 182/425 (42%), Gaps = 49/425 (11%)

Query: 362 TYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEAL--DVFK 419
           TY  ++G   R         L+ +M +DG Q + + Y+ +I S  R N ++  L   +++
Sbjct: 211 TYNALIGACARNNDLEKALNLMSRMRQDGFQSDFINYSLIIQSLTRTNKIDIPLLQKLYE 270

Query: 420 QMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAG 479
           +++    E D +    +I   AKAG  + A+     +QA+GL+P T T+  +I+ LG  G
Sbjct: 271 EIESDKIELDGLLLNDIILGFAKAGDPNRALYFLSMVQASGLNPKTSTFVAVISALGNHG 330

Query: 480 HLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYS 539
             + A  +F EM   G  P +  +N ++   A+  + + A  +  +M+ +G  PD+ TY 
Sbjct: 331 RTEEAEAIFEEMKEGGLKPRIKAFNALLKGYARKGSLKEAESIISEMEKSGLSPDEHTYG 390

Query: 540 IVMEVLGHCG------------------------------YLDEAE-----AVFAEMRRK 564
           ++++   + G                              Y D  E      V  EM+  
Sbjct: 391 LLVDAYANVGRWESARHLLKQMEARNVQPNTFIFSRILASYRDRGEWQKTFEVLREMKNS 450

Query: 565 NWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDA 624
           N  PD   Y +++D +GK   +  A E Y+ ML  G+ P+V T N+L+    + G    A
Sbjct: 451 NVKPDRHFYNVMIDTFGKFNCLDHAMETYDRMLSEGIEPDVVTWNTLIDCHRKHGYHDRA 510

Query: 625 YHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGFCHELMAVSGHPAHMFLLSMPSPG 684
             L + M   G  P   TY ++++   E +  +D     E+  + G      LL      
Sbjct: 511 AELFEEMQERGYLPCPTTYNIMINSLGE-QEKWD-----EVKILLGKMQSQGLLPNVVTY 564

Query: 685 PDGQNVRDHVGSF------LEMMHSEDRESKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQ 738
               ++  H G F      LE M S   +    + +A+++   + GL E+A + + V   
Sbjct: 565 TTLVDIYGHSGRFNDAIDCLEAMKSAGLKPSATMYNALINAFAQRGLSEQAVNAYRVMIS 624

Query: 739 KNVYP 743
             + P
Sbjct: 625 DGLRP 629



 Score =  117 bits (292), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 100/424 (23%), Positives = 186/424 (43%), Gaps = 16/424 (3%)

Query: 369 ILGRARQFGAINK---LLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVG 425
           ILG A+  G  N+    L  +   G  P   T+  +I + G      EA  +F++M+  G
Sbjct: 288 ILGFAKA-GDPNRALYFLSMVQASGLNPKTSTFVAVISALGNHGRTEEAEAIFEEMKEGG 346

Query: 426 CEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAH 485
            +P    +  L+  +A+ G L  A  +  +M+ +GLSPD  TY ++++     G  ++A 
Sbjct: 347 LKPRIKAFNALLKGYARKGSLKEAESIISEMEKSGLSPDEHTYGLLVDAYANVGRWESAR 406

Query: 486 QLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVL 545
            L  +M  +   PN   ++ ++A       +Q   ++ R+M+N+  +PD+  Y+++++  
Sbjct: 407 HLLKQMEARNVQPNTFIFSRILASYRDRGEWQKTFEVLREMKNSNVKPDRHFYNVMIDTF 466

Query: 546 GHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNV 605
           G    LD A   +  M  +   PD   +  L+D   K G   +A E +E M + G  P  
Sbjct: 467 GKFNCLDHAMETYDRMLSEGIEPDVVTWNTLIDCHRKHGYHDRAAELFEEMQERGYLPCP 526

Query: 606 PTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGFCHEL 665
            T N ++++     +  +   LL  M + GL P++ TYT L+     +    D   C E 
Sbjct: 527 TTYNIMINSLGEQEKWDEVKILLGKMQSQGLLPNVVTYTTLVDIYGHSGRFNDAIDCLEA 586

Query: 666 MAVSG-HPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRESKRGLVDAVVDFLHKSG 724
           M  +G  P+     ++ +           V ++  M+    R S   L +++++   +  
Sbjct: 587 MKSAGLKPSATMYNALINAFAQRGLSEQAVNAYRVMISDGLRPSLLAL-NSLINAFGEDR 645

Query: 725 LKEEAGSVWEVAAQKNVYPDAVKEKGMSYWLINLHVMSDGTAVIALSRTLAWFRKQMLIS 784
              EA S+ +   + +V PD V    +   LI +       AV           ++M++S
Sbjct: 646 RDIEAFSILQYMKENDVKPDVVTYTTLMKALIRVDKFDKVPAVY----------EEMILS 695

Query: 785 GVGP 788
           G  P
Sbjct: 696 GCTP 699



 Score =  102 bits (253), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 90/358 (25%), Positives = 162/358 (45%), Gaps = 13/358 (3%)

Query: 391 CQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAM 450
           C    + Y+ LIH+ GR+  L EA  +  Q Q +      +TY  LI   A+   L+ A+
Sbjct: 175 CFSYELLYSILIHALGRSEKLYEAF-ILSQKQTLTP----LTYNALIGACARNNDLEKAL 229

Query: 451 DMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAA--HQLFCEMVNQGCIPNLVTYNIMIA 508
           ++  +M+  G   D   YS+II  L +   +      +L+ E+ +     + +  N +I 
Sbjct: 230 NLMSRMRQDGFQSDFINYSLIIQSLTRTNKIDIPLLQKLYEEIESDKIELDGLLLNDIIL 289

Query: 509 LQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVP 568
             AKA +   AL     +Q +G  P   T+  V+  LG+ G  +EAEA+F EM+     P
Sbjct: 290 GFAKAGDPNRALYFLSMVQASGLNPKTSTFVAVISALGNHGRTEEAEAIFEEMKEGGLKP 349

Query: 569 DEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLL 628
               +  L+  + + G++++A      M ++GL P+  T   L+ A+  VG+   A HLL
Sbjct: 350 RIKAFNALLKGYARKGSLKEAESIISEMEKSGLSPDEHTYGLLVDAYANVGRWESARHLL 409

Query: 629 QGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGF--CHELMAVSGHP-AHMFLLSMPSPGP 685
           + M    ++P+   ++ +L+   + R  +   F    E+   +  P  H + + + + G 
Sbjct: 410 KQMEARNVQPNTFIFSRILASYRD-RGEWQKTFEVLREMKNSNVKPDRHFYNVMIDTFG- 467

Query: 686 DGQNVRDHVGSFLEMMHSEDRESKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYP 743
              N  DH     + M SE  E      + ++D   K G  + A  ++E   ++   P
Sbjct: 468 -KFNCLDHAMETYDRMLSEGIEPDVVTWNTLIDCHRKHGYHDRAAELFEEMQERGYLP 524


>gi|302775073|ref|XP_002970953.1| hypothetical protein SELMODRAFT_94034 [Selaginella moellendorffii]
 gi|300161664|gb|EFJ28279.1| hypothetical protein SELMODRAFT_94034 [Selaginella moellendorffii]
          Length = 577

 Score =  169 bits (427), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 92/294 (31%), Positives = 160/294 (54%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           G   D HTYT +V  L + ++      L++++  +GC P + TYN L++   +   L EA
Sbjct: 262 GCTIDIHTYTAIVDWLAKNKKIEEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEA 321

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
           +D+ +++   GC PD VTY +LID   K      A  ++K+M   GL+ DT  Y+ +I  
Sbjct: 322 IDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMALRGLALDTVCYTALIRE 381

Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPD 534
           L + G +  A  ++  M + GC+P++VT + MI   +KA    +A+++++ M+  G  P+
Sbjct: 382 LLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPN 441

Query: 535 KVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYE 594
           +V YS ++  L     +D A  + A+M++    PD   Y +L+D   K+G+V  A  +++
Sbjct: 442 EVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFD 501

Query: 595 AMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
            ML+AG +P+V T N L+S F + G    A  +   M +     ++ TY  L+S
Sbjct: 502 EMLEAGCKPDVYTYNILISGFCKAGNTDAACGVFDDMSSSRCSANVVTYGALIS 555



 Score =  158 bits (400), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 85/267 (31%), Positives = 148/267 (55%), Gaps = 1/267 (0%)

Query: 382 LLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHA 441
           L++++  +GC P + TYN L++   +   L EA+D+ +++   GC PD VTY +LID   
Sbjct: 8   LMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLG 67

Query: 442 KAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLV 501
           K      A  ++K+M   GL+ DT  Y+ +I  L + G +  A  ++  M + GC+P++V
Sbjct: 68  KEKRSFEAYKLFKEMALRGLALDTVCYTALIRELLQTGKIPQASSVYKTMTSHGCVPDVV 127

Query: 502 TYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEM 561
           T + MI   +KA    +A+++++ M+  G  P++V YS ++  L     +D A  + A+M
Sbjct: 128 TLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQM 187

Query: 562 RRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQL 621
           ++    PD   Y +L+D   K+G+V  A  +++ ML+AG +P+V T N L+S F + G  
Sbjct: 188 KKAFCTPDTITYNVLIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNT 247

Query: 622 SDAYHLLQGMLNL-GLKPSLQTYTLLL 647
             A H L     + G    + TYT ++
Sbjct: 248 DAASHSLAQETTINGCTIDIHTYTAIV 274



 Score =  150 bits (378), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 93/304 (30%), Positives = 154/304 (50%), Gaps = 3/304 (0%)

Query: 347 FNWLRRQA--GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHS 404
            + LR+    G   D  TYT+++  LG+ ++     KL  +M   G   + V Y  LI  
Sbjct: 41  IDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMALRGLALDTVCYTALIRE 100

Query: 405 YGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPD 464
             +   + +A  V+K M   GC PD VT  T+ID  +KAG +  A+ ++K M+A GL+P+
Sbjct: 101 LLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPN 160

Query: 465 TFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYR 524
              YS +I+ L KA  +  A ++  +M    C P+ +TYN++I    K+ + ++A   + 
Sbjct: 161 EVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNVLIDGLCKSGDVEAARAFFD 220

Query: 525 DMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVP-DEPVYGLLVDLWGKA 583
           +M  AG +PD  TY+I++      G  D A    A+    N    D   Y  +VD   K 
Sbjct: 221 EMLEAGCKPDVYTYNILISGFCKAGNTDAASHSLAQETTINGCTIDIHTYTAIVDWLAKN 280

Query: 584 GNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTY 643
             + +A    E +   G  P + T N+LL+   ++G+L +A  LL+ +++ G  P + TY
Sbjct: 281 KKIEEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTY 340

Query: 644 TLLL 647
           T L+
Sbjct: 341 TSLI 344



 Score =  142 bits (358), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 92/274 (33%), Positives = 136/274 (49%)

Query: 362 TYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQM 421
           TY  ++  L +  +      LL ++V +GC P+VVTY  LI   G+     EA  +FK+M
Sbjct: 304 TYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEM 363

Query: 422 QVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHL 481
            + G   D V Y  LI    + G +  A  +YK M + G  PD  T S +I+ L KAG +
Sbjct: 364 ALRGLALDTVCYTALIRELLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKAGRI 423

Query: 482 QAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIV 541
            AA ++F  M  +G  PN V Y+ +I    KAR    AL++   M+ A   PD +TY+I+
Sbjct: 424 GAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNIL 483

Query: 542 MEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGL 601
           ++ L   G ++ A A F EM      PD   Y +L+  + KAGN   A   ++ M  +  
Sbjct: 484 IDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAACGVFDDMSSSRC 543

Query: 602 RPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLG 635
             NV T  +L+S   +  QL+ A    Q M   G
Sbjct: 544 SANVVTYGALISGLCKRRQLTKASLYFQHMKERG 577



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 99/362 (27%), Positives = 159/362 (43%), Gaps = 50/362 (13%)

Query: 329 QANQVLKQLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVR 388
           QA+ V K +  H              G   D  T +TM+  L +A + GA  ++   M  
Sbjct: 109 QASSVYKTMTSH--------------GCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEA 154

Query: 389 DGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDV 448
            G  PN V Y+ LIH   +A  ++ AL++  QM+   C PD +TY  LID   K+G ++ 
Sbjct: 155 RGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNVLIDGLCKSGDVEA 214

Query: 449 AMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAA-HQLFCE----------------- 490
           A   + +M  AG  PD +TY+++I+   KAG+  AA H L  E                 
Sbjct: 215 ARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAASHSLAQETTINGCTIDIHTYTAIV 274

Query: 491 ------------------MVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFE 532
                             +   GC P + TYN ++    K    + A+ L R + + G  
Sbjct: 275 DWLAKNKKIEEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCT 334

Query: 533 PDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEW 592
           PD VTY+ +++ LG      EA  +F EM  +    D   Y  L+    + G + +A   
Sbjct: 335 PDVVTYTSLIDGLGKEKRSFEAYKLFKEMALRGLALDTVCYTALIRELLQTGKIPQASSV 394

Query: 593 YEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTE 652
           Y+ M   G  P+V T ++++    + G++  A  + + M   GL P+   Y+ L+    +
Sbjct: 395 YKTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCK 454

Query: 653 AR 654
           AR
Sbjct: 455 AR 456



 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 91/333 (27%), Positives = 147/333 (44%), Gaps = 36/333 (10%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           ++A    D  TY  ++  L ++    A     D+M+  GC+P+V TYN LI  + +A   
Sbjct: 188 KKAFCTPDTITYNVLIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNT 247

Query: 412 NEALDVFKQMQVV-GCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSV 470
           + A     Q   + GC  D  TY  ++D  AK   ++ A+ + +K+ A G +P   TY+ 
Sbjct: 248 DAASHSLAQETTINGCTIDIHTYTAIVDWLAKNKKIEEAVALMEKITANGCTPTIATYNA 307

Query: 471 IINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAG 530
           ++N L K G L+ A  L  ++V+ GC P++VTY  +I    K +    A KL+++M   G
Sbjct: 308 LLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMALRG 367

Query: 531 FEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAW 590
              D V Y+ ++  L   G + +A +V+  M     VPD      ++D   KAG +  A 
Sbjct: 368 LALDTVCYTALIRELLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAV 427

Query: 591 EWYEAMLQAGLRPN-----------------------------------VPTCNSLLSAF 615
             +++M   GL PN                                     T N L+   
Sbjct: 428 RIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGL 487

Query: 616 LRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
            + G +  A      ML  G KP + TY +L+S
Sbjct: 488 CKSGDVEAARAFFDEMLEAGCKPDVYTYNILIS 520



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 79/256 (30%), Positives = 129/256 (50%), Gaps = 2/256 (0%)

Query: 347 FNWLRRQA--GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHS 404
            + LR+    G   D  TYT+++  LG+ ++     KL  +M   G   + V Y  LI  
Sbjct: 322 IDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMALRGLALDTVCYTALIRE 381

Query: 405 YGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPD 464
             +   + +A  V+K M   GC PD VT  T+ID  +KAG +  A+ ++K M+A GL+P+
Sbjct: 382 LLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPN 441

Query: 465 TFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYR 524
              YS +I+ L KA  +  A ++  +M    C P+ +TYNI+I    K+ + ++A   + 
Sbjct: 442 EVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFD 501

Query: 525 DMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAG 584
           +M  AG +PD  TY+I++      G  D A  VF +M       +   YG L+    K  
Sbjct: 502 EMLEAGCKPDVYTYNILISGFCKAGNTDAACGVFDDMSSSRCSANVVTYGALISGLCKRR 561

Query: 585 NVRKAWEWYEAMLQAG 600
            + KA  +++ M + G
Sbjct: 562 QLTKASLYFQHMKERG 577



 Score =  115 bits (287), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 72/238 (30%), Positives = 115/238 (48%)

Query: 411 LNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSV 470
           + EA+ + +++   GC P   TY  L++   K G L+ A+D+ +K+   G +PD  TY+ 
Sbjct: 2   IEEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTS 61

Query: 471 IINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAG 530
           +I+ LGK      A++LF EM  +G   + V Y  +I    +      A  +Y+ M + G
Sbjct: 62  LIDGLGKEKRSFEAYKLFKEMALRGLALDTVCYTALIRELLQTGKIPQASSVYKTMTSHG 121

Query: 531 FEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAW 590
             PD VT S +++ L   G +  A  +F  M  +   P+E VY  L+    KA  +  A 
Sbjct: 122 CVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCAL 181

Query: 591 EWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
           E    M +A   P+  T N L+    + G +  A      ML  G KP + TY +L+S
Sbjct: 182 EMLAQMKKAFCTPDTITYNVLIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILIS 239



 Score = 74.3 bits (181), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 46/174 (26%), Positives = 82/174 (47%)

Query: 481 LQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSI 540
           ++ A  L  ++   GC P + TYN ++    K    + A+ L R + + G  PD VTY+ 
Sbjct: 2   IEEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTS 61

Query: 541 VMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAG 600
           +++ LG      EA  +F EM  +    D   Y  L+    + G + +A   Y+ M   G
Sbjct: 62  LIDGLGKEKRSFEAYKLFKEMALRGLALDTVCYTALIRELLQTGKIPQASSVYKTMTSHG 121

Query: 601 LRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEAR 654
             P+V T ++++    + G++  A  + + M   GL P+   Y+ L+    +AR
Sbjct: 122 CVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKAR 175



 Score = 41.2 bits (95), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 19/63 (30%), Positives = 35/63 (55%)

Query: 585 NVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYT 644
            + +A    E +   G  P + T N+LL+   ++G+L +A  LL+ +++ G  P + TYT
Sbjct: 1   KIEEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYT 60

Query: 645 LLL 647
            L+
Sbjct: 61  SLI 63


>gi|297829236|ref|XP_002882500.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297328340|gb|EFH58759.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 871

 Score =  168 bits (426), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 122/490 (24%), Positives = 209/490 (42%), Gaps = 38/490 (7%)

Query: 291 FASTGNVVESVSRILRQWKWGPLAEEALGNTNYSMDAYQANQVLKQLQDHTVALGFFNWL 350
           F     +V  +  +L    WGP AE AL   N+         VL++L+D   A+ +F W 
Sbjct: 29  FEGNRQIVNDICNVLETGAWGPSAENALSALNFKPQPEFVIGVLRRLKDVNRAIEYFRWY 88

Query: 351 RRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANY 410
            R+    H   +Y +++ ++ R R F A++++L +M   G  P+V T   ++ S  +AN 
Sbjct: 89  ERRTELPHCPESYNSLLLVMARCRNFDALDQILGEMSVAGFGPSVNTCIEMVLSCVKANK 148

Query: 411 LNEALDV-----------------------------------FKQMQVVGCEPDRVTYCT 435
           L E  DV                                   F+QMQ +G EP    + T
Sbjct: 149 LREGFDVVQNMRKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTT 208

Query: 436 LIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQG 495
           LI   AK G +D A+ +  +M+++ L  D   Y+V I+  GK G +  A + F E+   G
Sbjct: 209 LIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANG 268

Query: 496 CIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAE 555
             P+ VTY  MI +  KA     A++++  ++     P    Y+ ++   G  G  DEA 
Sbjct: 269 LKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAY 328

Query: 556 AVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAF 615
           ++    R K  +P    Y  ++    K G V +A   +E M +    PN+ T N L+   
Sbjct: 329 SLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALRVFEEM-KKDAAPNLSTYNILIDML 387

Query: 616 LRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS-CCTEARSPYDMGFCHELMAVSGHPAH 674
            R G+L  A+ L   M   GL P+++T  +++   C   +         ++      P  
Sbjct: 388 CRAGKLDCAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAIFEQMDYKVCTPDE 447

Query: 675 MFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRESKRGLVDAVVDFLHKSGLKEEAGSVWE 734
           +   S+         V D    + +M+ S+ R +       + +F +  G KE+   +++
Sbjct: 448 ITFCSLIDGLGKVGRVDDAYKIYEKMLDSDCRTNSIVYTSLIKNFFN-HGRKEDGHKIYK 506

Query: 735 VAAQKNVYPD 744
               +N  PD
Sbjct: 507 DMVNQNCSPD 516



 Score =  158 bits (400), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 91/296 (30%), Positives = 152/296 (51%)

Query: 359 DEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVF 418
           DE T+ +++  LG+  +     K+ ++M+   C+ N + Y  LI ++       +   ++
Sbjct: 446 DEITFCSLIDGLGKVGRVDDAYKIYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIY 505

Query: 419 KQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKA 478
           K M    C PD     T +D   KAG  +    M++++++    PD  +YS++I+ L KA
Sbjct: 506 KDMVNQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKSRRFVPDARSYSILIHGLIKA 565

Query: 479 GHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTY 538
           G     ++LF  M  QGC+ +   YNI+I    K      A +L  +M+  GFEP  VTY
Sbjct: 566 GFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTY 625

Query: 539 SIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQ 598
             V++ L     LDEA  +F E + K    +  +Y  L+D +GK G + +A+   E ++Q
Sbjct: 626 GSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQ 685

Query: 599 AGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEAR 654
            GL PNV T NSLL A ++  ++++A    Q M  L   P+  TY +L++   + R
Sbjct: 686 KGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVR 741



 Score =  157 bits (396), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 111/436 (25%), Positives = 194/436 (44%), Gaps = 49/436 (11%)

Query: 269 ERFSKPSREMKIPAGLA--PFSRHFASTGNVVESVSRILRQWKWGPLAEEALGNTNYSMD 326
           E F    +  ++P   A       + S G   E+ S + RQ   G +          S+ 
Sbjct: 294 EMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIP---------SVI 344

Query: 327 AYQAN-QVLKQLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQ 385
           AY      L+++     AL  F  +++ A    +  TY  ++ +L RA +     +L D 
Sbjct: 345 AYNCILTCLRKMGKVDEALRVFEEMKKDAA--PNLSTYNILIDMLCRAGKLDCAFELRDS 402

Query: 386 MVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGF 445
           M + G  PNV T N ++    ++  L+EA  +F+QM    C PD +T+C+LID   K G 
Sbjct: 403 MQKAGLFPNVRTVNIMVDRLCKSQKLDEACAIFEQMDYKVCTPDEITFCSLIDGLGKVGR 462

Query: 446 LDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNI 505
           +D A  +Y+KM  +    ++  Y+ +I      G  +  H+++ +MVNQ C P+L   N 
Sbjct: 463 VDDAYKIYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMVNQNCSPDLQLLNT 522

Query: 506 MIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKN 565
            +    KA   +    ++ ++++  F PD  +YSI++  L   G+ +E   +F  M+ + 
Sbjct: 523 YMDCMFKAGEPEKGRAMFEEIKSRRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQG 582

Query: 566 WVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRP---------------------- 603
            V D   Y +++D + K G V KA++  E M   G  P                      
Sbjct: 583 CVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAY 642

Query: 604 -------------NVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCC 650
                        NV   +SL+  F +VG++ +AY +L+ ++  GL P++ T+  LL   
Sbjct: 643 MLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNVYTWNSLLDAL 702

Query: 651 TEARSPYDMGFCHELM 666
            +A    +   C + M
Sbjct: 703 VKAEEINEALVCFQSM 718



 Score =  157 bits (396), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 98/340 (28%), Positives = 158/340 (46%), Gaps = 36/340 (10%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           ++ G++   H +TT++    +  +  +   LLD+M       ++V YN  I S+G+   +
Sbjct: 195 QELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKV 254

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQ-------------- 457
           + A   F +++  G +PD VTY ++I +  KA  LD A++M++ ++              
Sbjct: 255 DMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTM 314

Query: 458 ---------------------AAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGC 496
                                A G  P    Y+ I+ CL K G +  A ++F EM  +  
Sbjct: 315 IMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALRVFEEM-KKDA 373

Query: 497 IPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEA 556
            PNL TYNI+I +  +A     A +L   MQ AG  P+  T +I+++ L     LDEA A
Sbjct: 374 APNLSTYNILIDMLCRAGKLDCAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACA 433

Query: 557 VFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFL 616
           +F +M  K   PDE  +  L+D  GK G V  A++ YE ML +  R N     SL+  F 
Sbjct: 434 IFEQMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKIYEKMLDSDCRTNSIVYTSLIKNFF 493

Query: 617 RVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSP 656
             G+  D + + + M+N    P LQ     + C  +A  P
Sbjct: 494 NHGRKEDGHKIYKDMVNQNCSPDLQLLNTYMDCMFKAGEP 533



 Score =  124 bits (311), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 71/264 (26%), Positives = 126/264 (47%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           ++ G   D   Y  ++    +  +     +LL++M   G +P VVTY  +I    + + L
Sbjct: 579 KEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRL 638

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
           +EA  +F++ +    E + V Y +LID   K G +D A  + +++   GL+P+ +T++ +
Sbjct: 639 DEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNVYTWNSL 698

Query: 472 INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF 531
           ++ L KA  +  A   F  M    C PN VTY I+I    K R +  A   +++MQ  G 
Sbjct: 699 LDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGM 758

Query: 532 EPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWE 591
           +P  ++Y+ ++  L   G + EA A+F   +    VPD   Y  +++          A+ 
Sbjct: 759 KPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEGLSNGNRAMDAFS 818

Query: 592 WYEAMLQAGLRPNVPTCNSLLSAF 615
            +E   + GL  +  TC  LL   
Sbjct: 819 LFEETRRRGLHIHNKTCVVLLDTL 842



 Score =  115 bits (287), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 73/292 (25%), Positives = 139/292 (47%)

Query: 356 FKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEAL 415
           F  D  +Y+ ++  L +A       +L   M   GC  +   YN +I  + +   +N+A 
Sbjct: 548 FVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAY 607

Query: 416 DVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCL 475
            + ++M+  G EP  VTY ++ID  AK   LD A  ++++ ++  +  +   YS +I+  
Sbjct: 608 QLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGF 667

Query: 476 GKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDK 535
           GK G +  A+ +  E++ +G  PN+ T+N ++    KA     AL  ++ M+     P++
Sbjct: 668 GKVGRIDEAYLILEELMQKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQ 727

Query: 536 VTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEA 595
           VTY I++  L      ++A   + EM+++   P    Y  ++    KAGN+ +A   ++ 
Sbjct: 728 VTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDR 787

Query: 596 MLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
               G  P+    N+++       +  DA+ L +     GL    +T  +LL
Sbjct: 788 FKANGGVPDSACYNAMIEGLSNGNRAMDAFSLFEETRRRGLHIHNKTCVVLL 839



 Score = 99.0 bits (245), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 56/200 (28%), Positives = 103/200 (51%)

Query: 363 YTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQ 422
           Y++++   G+  +      +L+++++ G  PNV T+N L+ +  +A  +NEAL  F+ M+
Sbjct: 660 YSSLIDGFGKVGRIDEAYLILEELMQKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMK 719

Query: 423 VVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQ 482
            + C P++VTY  LI+   K    + A   +++MQ  G+ P T +Y+ +I+ L KAG++ 
Sbjct: 720 ELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIA 779

Query: 483 AAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVM 542
            A  LF      G +P+   YN MI   +       A  L+ + +  G      T  +++
Sbjct: 780 EAGALFDRFKANGGVPDSACYNAMIEGLSNGNRAMDAFSLFEETRRRGLHIHNKTCVVLL 839

Query: 543 EVLGHCGYLDEAEAVFAEMR 562
           + L     L++A  V A +R
Sbjct: 840 DTLHKNDCLEQAAIVGAVLR 859



 Score = 39.3 bits (90), Expect = 8.2,   Method: Compositional matrix adjust.
 Identities = 29/116 (25%), Positives = 50/116 (43%), Gaps = 1/116 (0%)

Query: 334 LKQLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQP 393
           L +++    A  F+  +++Q G K    +YTTM+  L +A        L D+   +G  P
Sbjct: 737 LCKVRKFNKAFVFWQEMQKQ-GMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVP 795

Query: 394 NVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVA 449
           +   YN +I      N   +A  +F++ +  G      T   L+D   K   L+ A
Sbjct: 796 DSACYNAMIEGLSNGNRAMDAFSLFEETRRRGLHIHNKTCVVLLDTLHKNDCLEQA 851


>gi|357481229|ref|XP_003610900.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355512235|gb|AES93858.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 1508

 Score =  168 bits (426), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 101/340 (29%), Positives = 177/340 (52%), Gaps = 13/340 (3%)

Query: 314 AEEALGNT----NYSMDAYQANQVLKQLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVG- 368
           AE  + +T    N  M  Y  N   +++ +       FN L R+ G + D  ++ T++  
Sbjct: 256 AESVIADTVQVYNAMMGVYARNGNFEKVNE------MFN-LMRERGCEPDIVSFNTLINA 308

Query: 369 -ILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCE 427
            +   A   G   +LLD++ + G +P+++TYN LI +  R + L EA+ VF  M+   C+
Sbjct: 309 KVKSCATVSGLAIELLDEVGKFGLRPDIITYNTLISACSRESNLKEAIGVFSHMESNRCQ 368

Query: 428 PDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQL 487
           PD  TY  +I ++ + GF   A  +++K+++ G SPD  TY+ ++    K G+ +    +
Sbjct: 369 PDLWTYNAMISVYGRCGFALKAEHLFEKLKSNGFSPDAVTYNSLLYAFSKEGNTEKVRDI 428

Query: 488 FCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGH 547
             EMV  G   + +TYN +I +  K   +  AL+LYRDM+++G  PD VTY++++++LG 
Sbjct: 429 SEEMVKMGFGKDEMTYNTIIHMYGKHGRHDEALRLYRDMKSSGRNPDAVTYTVLIDLLGK 488

Query: 548 CGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPT 607
              ++EA  V +EM      P    Y  L+  + K G   +A E +  M ++G++ +   
Sbjct: 489 ASKIEEASKVMSEMLDAGVKPTLHTYSALICAYAKVGRRVEAEETFNRMRESGIKADHLA 548

Query: 608 CNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
            + +L  FLR  ++  A  L Q M+  G  P    Y ++L
Sbjct: 549 YSVMLDFFLRFNEIKKAAALYQEMIEAGFTPDTGLYEVML 588



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 80/263 (30%), Positives = 131/263 (49%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           G + D  TY T++    R         +   M  + CQP++ TYN +I  YGR  +  +A
Sbjct: 331 GLRPDIITYNTLISACSRESNLKEAIGVFSHMESNRCQPDLWTYNAMISVYGRCGFALKA 390

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
             +F++++  G  PD VTY +L+   +K G  +   D+ ++M   G   D  TY+ II+ 
Sbjct: 391 EHLFEKLKSNGFSPDAVTYNSLLYAFSKEGNTEKVRDISEEMVKMGFGKDEMTYNTIIHM 450

Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPD 534
            GK G    A +L+ +M + G  P+ VTY ++I L  KA   + A K+  +M +AG +P 
Sbjct: 451 YGKHGRHDEALRLYRDMKSSGRNPDAVTYTVLIDLLGKASKIEEASKVMSEMLDAGVKPT 510

Query: 535 KVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYE 594
             TYS ++      G   EAE  F  MR      D   Y +++D + +   ++KA   Y+
Sbjct: 511 LHTYSALICAYAKVGRRVEAEETFNRMRESGIKADHLAYSVMLDFFLRFNEIKKAAALYQ 570

Query: 595 AMLQAGLRPNVPTCNSLLSAFLR 617
            M++AG  P+      +L A +R
Sbjct: 571 EMIEAGFTPDTGLYEVMLPALVR 593



 Score =  129 bits (323), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 108/501 (21%), Positives = 203/501 (40%), Gaps = 51/501 (10%)

Query: 352  RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
            + AG+    H Y  M+G+L R ++   +  +L +M   G +P++  +N ++  Y      
Sbjct: 921  KAAGYFPTMHLYRLMIGLLCRFKRVRDVRVMLSEMGEAGFKPDLQIFNSVLKLYSSIEEF 980

Query: 412  NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
                 +++ +Q  G  PD  TY TLI ++ +    +  + +  KM++ GL P   TY  +
Sbjct: 981  QNMGVIYQMIQDAGLAPDEETYNTLITMYCRDHRPEEGLSLMHKMKSLGLEPKRDTYRSM 1040

Query: 472  INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF 531
            I    K      A +LF E+ + G   +   Y++M+ +   + ++Q A  L   M+ AG 
Sbjct: 1041 IAAFSKQQLYDQAEELFEELRSNGYKLDRSFYHLMMKMYRTSGDHQKAENLLEIMKEAGI 1100

Query: 532  EPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWE 591
            EP+  T  ++M   G  G  +EA+ +   +R    V D   Y  ++D + K G+ +   E
Sbjct: 1101 EPNTATMHLLMVSYGKSGQPEEADRILKNLRTMGAVLDTLPYSSVIDAYLKKGDAKAGIE 1160

Query: 592  WYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCT 651
                M +A + P+       + A    G+++DA +LL  +  +G                
Sbjct: 1161 KLTEMKEAAIEPDHRIWTCFIRAASLSGEVNDANNLLNALQAVG---------------- 1204

Query: 652  EARSPYDMGFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRESKRG 711
                                    F L +   G   +++   V   L  +   +  +   
Sbjct: 1205 ------------------------FDLPIRLLGEKSESLVSEVDQCLGRLEHVEDNAAFN 1240

Query: 712  LVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAVKEKGMSYWLINLHVMSDGTAVIALS 771
             V+A+VD L    L+  A  V+++A ++++Y   +       W  +   +S G+A++ L+
Sbjct: 1241 FVNALVDLLWAFELRATASWVFQLAIKRSIYRHDIFRVAQKDWGADFRKLSAGSALVGLT 1300

Query: 772  RTLAWFRKQMLISGVG----PSRIDIVTGWGRRSRVTGTSLVRQAVQELLHMFSFPFFTE 827
                W       S  G    P  + ++TG    + V+  S ++  + E+      PF   
Sbjct: 1301 ---LWLDHMQDASLQGYPESPKSVVLITGTAEYNMVSLDSTLKAFLWEM----GSPFLPC 1353

Query: 828  NGNSGCFVGCGEPLNKWLLQS 848
                G  V     L  WL  S
Sbjct: 1354 KTRHGVLVAKAHSLRMWLKDS 1374



 Score =  108 bits (269), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 66/253 (26%), Positives = 132/253 (52%), Gaps = 9/253 (3%)

Query: 406 GRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDT 465
           G+AN    A+++F + + V  +  +V Y  ++ ++A+ G  +   +M+  M+  G  PD 
Sbjct: 241 GKANQEGIAVEIFAKAESVIADTVQV-YNAMMGVYARNGNFEKVNEMFNLMRERGCEPDI 299

Query: 466 FTYSVIIN-----CLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSAL 520
            +++ +IN     C   +G    A +L  E+   G  P+++TYN +I+  ++  N + A+
Sbjct: 300 VSFNTLINAKVKSCATVSG---LAIELLDEVGKFGLRPDIITYNTLISACSRESNLKEAI 356

Query: 521 KLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLW 580
            ++  M++   +PD  TY+ ++ V G CG+  +AE +F +++   + PD   Y  L+  +
Sbjct: 357 GVFSHMESNRCQPDLWTYNAMISVYGRCGFALKAEHLFEKLKSNGFSPDAVTYNSLLYAF 416

Query: 581 GKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSL 640
            K GN  K  +  E M++ G   +  T N+++  + + G+  +A  L + M + G  P  
Sbjct: 417 SKEGNTEKVRDISEEMVKMGFGKDEMTYNTIIHMYGKHGRHDEALRLYRDMKSSGRNPDA 476

Query: 641 QTYTLLLSCCTEA 653
            TYT+L+    +A
Sbjct: 477 VTYTVLIDLLGKA 489



 Score = 79.0 bits (193), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 73/312 (23%), Positives = 139/312 (44%), Gaps = 11/312 (3%)

Query: 340 HTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYN 399
           H  AL  +  ++  +G   D  TYT ++ +LG+A +    +K++ +M+  G +P + TY+
Sbjct: 457 HDEALRLYRDMK-SSGRNPDAVTYTVLIDLLGKASKIEEASKVMSEMLDAGVKPTLHTYS 515

Query: 400 RLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAA 459
            LI +Y +     EA + F +M+  G + D + Y  ++D   +   +  A  +Y++M  A
Sbjct: 516 ALICAYAKVGRRVEAEETFNRMRESGIKADHLAYSVMLDFFLRFNEIKKAAALYQEMIEA 575

Query: 460 GLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCI-PNLVTYNIMIALQAKARNYQS 518
           G +PDT  Y V++  L +        ++  +    G + P+ ++     ++  K   Y  
Sbjct: 576 GFTPDTGLYEVMLPALVRENMGDVIERVVQDTKELGSMNPHDIS-----SVLVKGGCYDH 630

Query: 519 ALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPD--EPVYGLL 576
             K+ +   + G+E D+  +  +M          EA     E  R++  PD  + +   L
Sbjct: 631 GAKMLKVAISNGYELDREIFLSIMSSYSSSARYSEA-CELVEFFREH-APDDIQMITEAL 688

Query: 577 VDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGL 636
           + +  KAG +  A E Y +    G   +     SL+    +  Q   A  L   M   G+
Sbjct: 689 IIILCKAGKLDAALEEYRSRGGLGTFRSCTMYESLIHECTKSEQFDIASQLFSDMRFNGV 748

Query: 637 KPSLQTYTLLLS 648
           +PS   Y  ++S
Sbjct: 749 EPSECLYQSMVS 760



 Score = 79.0 bits (193), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 51/239 (21%), Positives = 114/239 (47%), Gaps = 2/239 (0%)

Query: 318  LGNTNYSMDAYQANQVLKQLQ--DHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQ 375
            +G   +  D    N VLK     +    +G    + + AG   DE TY T++ +  R  +
Sbjct: 955  MGEAGFKPDLQIFNSVLKLYSSIEEFQNMGVIYQMIQDAGLAPDEETYNTLITMYCRDHR 1014

Query: 376  FGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCT 435
                  L+ +M   G +P   TY  +I ++ +    ++A ++F++++  G + DR  Y  
Sbjct: 1015 PEEGLSLMHKMKSLGLEPKRDTYRSMIAAFSKQQLYDQAEELFEELRSNGYKLDRSFYHL 1074

Query: 436  LIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQG 495
            ++ ++  +G    A ++ + M+ AG+ P+T T  +++   GK+G  + A ++   +   G
Sbjct: 1075 MMKMYRTSGDHQKAENLLEIMKEAGIEPNTATMHLLMVSYGKSGQPEEADRILKNLRTMG 1134

Query: 496  CIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEA 554
             + + + Y+ +I    K  + ++ ++   +M+ A  EPD   ++  +      G +++A
Sbjct: 1135 AVLDTLPYSSVIDAYLKKGDAKAGIEKLTEMKEAAIEPDHRIWTCFIRAASLSGEVNDA 1193



 Score = 76.6 bits (187), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 78/390 (20%), Positives = 162/390 (41%), Gaps = 16/390 (4%)

Query: 352  RQAGFKHDEHTYTTMVGILGRARQFGAINKLL-----DQMVRDGCQPNVVTYNRLIHSYG 406
            R  G +  E  Y +MV +  R         LL     + ++ D    +++    +I +YG
Sbjct: 744  RFNGVEPSECLYQSMVSVYCRIGFPETAQHLLYHAEKNDIILDNVTVHIID---IIETYG 800

Query: 407  RANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTF 466
            +      A  + + ++    + DR  +  LI  +A +G  + A  ++  M   G SP   
Sbjct: 801  KLKMWQSAESIVENLRQRCSKMDRKVWNALIHAYAFSGCYERARAIFNTMMREGPSPTVE 860

Query: 467  TYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDM 526
            + + ++  L   G L   + +  E+ +     +  +  +M+   A+A N     K+Y  M
Sbjct: 861  SVNGLLQALIVDGRLSELYVVIQELQDMDLKISKSSILLMLEAFAQAGNLFEVQKVYNGM 920

Query: 527  QNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNV 586
            + AG+ P    Y +++ +L     + +   + +EM    + PD  ++  ++ L+      
Sbjct: 921  KAAGYFPTMHLYRLMIGLLCRFKRVRDVRVMLSEMGEAGFKPDLQIFNSVLKLYSSIEEF 980

Query: 587  RKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLL 646
            +     Y+ +  AGL P+  T N+L++ + R  +  +   L+  M +LGL+P   TY  +
Sbjct: 981  QNMGVIYQMIQDAGLAPDEETYNTLITMYCRDHRPEEGLSLMHKMKSLGLEPKRDTYRSM 1040

Query: 647  LSCCTEARSPYDMGFCHELMAVSGHPA----HMFLLSMPSPGPDGQNVRDHVGSFLEMMH 702
            ++  ++ +         E +  +G+      +  ++ M     D Q   +     LE+M 
Sbjct: 1041 IAAFSKQQLYDQAEELFEELRSNGYKLDRSFYHLMMKMYRTSGDHQKAEN----LLEIMK 1096

Query: 703  SEDRESKRGLVDAVVDFLHKSGLKEEAGSV 732
                E     +  ++    KSG  EEA  +
Sbjct: 1097 EAGIEPNTATMHLLMVSYGKSGQPEEADRI 1126



 Score = 68.6 bits (166), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 82/404 (20%), Positives = 147/404 (36%), Gaps = 79/404 (19%)

Query: 347 FNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYG 406
           FN +R ++G K D   Y+ M+    R  +      L  +M+  G  P+   Y  ++ +  
Sbjct: 534 FNRMR-ESGIKADHLAYSVMLDFFLRFNEIKKAAALYQEMIEAGFTPDTGLYEVMLPALV 592

Query: 407 RANYLNEALDVFKQMQVVGC-EPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDT 465
           R N  +    V +  + +G   P  ++      +  K G  D    M K   + G   D 
Sbjct: 593 RENMGDVIERVVQDTKELGSMNPHDIS-----SVLVKGGCYDHGAKMLKVAISNGYELDR 647

Query: 466 FTY-----------------------------------SVIINCLGKAGHLQAAHQLFCE 490
             +                                     +I  L KAG L AA + +  
Sbjct: 648 EIFLSIMSSYSSSARYSEACELVEFFREHAPDDIQMITEALIIILCKAGKLDAALEEYRS 707

Query: 491 MVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEP----------------- 533
               G   +   Y  +I    K+  +  A +L+ DM+  G EP                 
Sbjct: 708 RGGLGTFRSCTMYESLIHECTKSEQFDIASQLFSDMRFNGVEPSECLYQSMVSVYCRIGF 767

Query: 534 ------------------DKVTYSI--VMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVY 573
                             D VT  I  ++E  G       AE++   +R++    D  V+
Sbjct: 768 PETAQHLLYHAEKNDIILDNVTVHIIDIIETYGKLKMWQSAESIVENLRQRCSKMDRKVW 827

Query: 574 GLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLN 633
             L+  +  +G   +A   +  M++ G  P V + N LL A +  G+LS+ Y ++Q + +
Sbjct: 828 NALIHAYAFSGCYERARAIFNTMMREGPSPTVESVNGLLQALIVDGRLSELYVVIQELQD 887

Query: 634 LGLKPSLQTYTLLLSCCTEARSPYDMGFCHELMAVSGHPAHMFL 677
           + LK S  +  L+L    +A + +++   +  M  +G+   M L
Sbjct: 888 MDLKISKSSILLMLEAFAQAGNLFEVQKVYNGMKAAGYFPTMHL 931


>gi|168019209|ref|XP_001762137.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162686541|gb|EDQ72929.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 513

 Score =  168 bits (426), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 90/305 (29%), Positives = 160/305 (52%)

Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLI 402
           A+  + W+ + + FK D   +  ++   GR +Q+         M +  C P   ++N L+
Sbjct: 84  AIVIYEWILQGSMFKPDVGCFNMLMDAYGRTKQWTEAENTFHLMKKFQCLPTETSFNVLM 143

Query: 403 HSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLS 462
            +Y R   L  A  V  +M+   C P  VTY T +++  K+G   +A D++++MQ  G+ 
Sbjct: 144 AAYSRGGQLERAERVLHEMKESNCSPGLVTYNTYLEVLNKSGSWQLAEDVFREMQNRGVP 203

Query: 463 PDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKL 522
           P   T++++IN  GKA H   A  LF  M    C P+L TY  +I   A+  N   A ++
Sbjct: 204 PAVNTFTLMINIYGKAHHSAKAEHLFQSMRKALCPPSLFTYTALINAHAREGNCVRAEEI 263

Query: 523 YRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGK 582
           + ++Q+ GF PD  TY+ ++E     G+   A+ VF  M       D   Y +L+D +G+
Sbjct: 264 FAELQSVGFVPDIYTYNALLEAYSRGGHPAGAKEVFETMLEAGVKADHVSYNILIDAFGR 323

Query: 583 AGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQT 642
           AG +  A   Y++M + G +P + +   LLSAF++ G+++DA + ++ + ++G++P    
Sbjct: 324 AGLISDAQAIYDSMKKVGFKPTMKSHILLLSAFVKAGRVTDAENFVRRLESMGVEPDTFM 383

Query: 643 YTLLL 647
           +  LL
Sbjct: 384 FNSLL 388



 Score =  154 bits (390), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 110/401 (27%), Positives = 189/401 (47%), Gaps = 14/401 (3%)

Query: 392 QPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMD 451
           +P+V  +N L+ +YGR     EA + F  M+   C P   ++  L+  +++ G L+ A  
Sbjct: 98  KPDVGCFNMLMDAYGRTKQWTEAENTFHLMKKFQCLPTETSFNVLMAAYSRGGQLERAER 157

Query: 452 MYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQA 511
           +  +M+ +  SP   TY+  +  L K+G  Q A  +F EM N+G  P + T+ +MI +  
Sbjct: 158 VLHEMKESNCSPGLVTYNTYLEVLNKSGSWQLAEDVFREMQNRGVPPAVNTFTLMINIYG 217

Query: 512 KARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEP 571
           KA +   A  L++ M+ A   P   TY+ ++      G    AE +FAE++   +VPD  
Sbjct: 218 KAHHSAKAEHLFQSMRKALCPPSLFTYTALINAHAREGNCVRAEEIFAELQSVGFVPDIY 277

Query: 572 VYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGM 631
            Y  L++ + + G+   A E +E ML+AG++ +  + N L+ AF R G +SDA  +   M
Sbjct: 278 TYNALLEAYSRGGHPAGAKEVFETMLEAGVKADHVSYNILIDAFGRAGLISDAQAIYDSM 337

Query: 632 LNLGLKPSLQTYTLLLSCCTEARSPYDM-GFCHELMAVSGHP-AHMFLLSMPSPGPDGQN 689
             +G KP+++++ LLLS   +A    D   F   L ++   P   MF   + + G  G+ 
Sbjct: 338 KKVGFKPTMKSHILLLSAFVKAGRVTDAENFVRRLESMGVEPDTFMFNSLLGAYGNSGR- 396

Query: 690 VRDHVGSFLEMMHSEDRESKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAVKEK 749
             D + S  E M     +     ++ +++   + G  E A  ++     K   PD +   
Sbjct: 397 -MDKMESLYESMQGSVCKPDIITLNTLINVYAQGGYIERAEEIFNSLESKGFTPDVMS-- 453

Query: 750 GMSYWLINLHVMSDGTAVIALSRTLAWFRKQMLISGVGPSR 790
               W   +   S       L R      ++MLI+G  P R
Sbjct: 454 ----WTSLMGAYSKRK----LYRKCVSVYQKMLIAGCIPDR 486



 Score =  147 bits (372), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 95/378 (25%), Positives = 176/378 (46%), Gaps = 19/378 (5%)

Query: 283 GLAPFSRHFASTGNVVESVSRILRQWKW------------GPLAEEALGNTNYSMDAYQA 330
            L    R   S  +++E+V+   RQ KW            G + +  +G  N  MDAY  
Sbjct: 54  ALDALPRCVGSWEDLMETVAEFRRQRKWRSAIVIYEWILQGSMFKPDVGCFNMLMDAYGR 113

Query: 331 NQVLKQLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDG 390
            +   + ++    +  F  L         E ++  ++    R  Q     ++L +M    
Sbjct: 114 TKQWTEAENTFHLMKKFQCL-------PTETSFNVLMAAYSRGGQLERAERVLHEMKESN 166

Query: 391 CQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAM 450
           C P +VTYN  +    ++     A DVF++MQ  G  P   T+  +I+I+ KA     A 
Sbjct: 167 CSPGLVTYNTYLEVLNKSGSWQLAEDVFREMQNRGVPPAVNTFTLMINIYGKAHHSAKAE 226

Query: 451 DMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQ 510
            +++ M+ A   P  FTY+ +IN   + G+   A ++F E+ + G +P++ TYN ++   
Sbjct: 227 HLFQSMRKALCPPSLFTYTALINAHAREGNCVRAEEIFAELQSVGFVPDIYTYNALLEAY 286

Query: 511 AKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDE 570
           ++  +   A +++  M  AG + D V+Y+I+++  G  G + +A+A++  M++  + P  
Sbjct: 287 SRGGHPAGAKEVFETMLEAGVKADHVSYNILIDAFGRAGLISDAQAIYDSMKKVGFKPTM 346

Query: 571 PVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQG 630
             + LL+  + KAG V  A  +   +   G+ P+    NSLL A+   G++     L + 
Sbjct: 347 KSHILLLSAFVKAGRVTDAENFVRRLESMGVEPDTFMFNSLLGAYGNSGRMDKMESLYES 406

Query: 631 MLNLGLKPSLQTYTLLLS 648
           M     KP + T   L++
Sbjct: 407 MQGSVCKPDIITLNTLIN 424



 Score =  139 bits (351), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 75/290 (25%), Positives = 146/290 (50%)

Query: 361 HTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQ 420
           +T+T M+ I G+A        L   M +  C P++ TY  LI+++ R      A ++F +
Sbjct: 207 NTFTLMINIYGKAHHSAKAEHLFQSMRKALCPPSLFTYTALINAHAREGNCVRAEEIFAE 266

Query: 421 MQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGH 480
           +Q VG  PD  TY  L++ +++ G    A ++++ M  AG+  D  +Y+++I+  G+AG 
Sbjct: 267 LQSVGFVPDIYTYNALLEAYSRGGHPAGAKEVFETMLEAGVKADHVSYNILIDAFGRAGL 326

Query: 481 LQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSI 540
           +  A  ++  M   G  P + ++ ++++   KA     A    R +++ G EPD   ++ 
Sbjct: 327 ISDAQAIYDSMKKVGFKPTMKSHILLLSAFVKAGRVTDAENFVRRLESMGVEPDTFMFNS 386

Query: 541 VMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAG 600
           ++   G+ G +D+ E+++  M+     PD      L++++ + G + +A E + ++   G
Sbjct: 387 LLGAYGNSGRMDKMESLYESMQGSVCKPDIITLNTLINVYAQGGYIERAEEIFNSLESKG 446

Query: 601 LRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCC 650
             P+V +  SL+ A+ +         + Q ML  G  P   T  +LLS C
Sbjct: 447 FTPDVMSWTSLMGAYSKRKLYRKCVSVYQKMLIAGCIPDRATAKVLLSSC 496



 Score = 91.3 bits (225), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 54/218 (24%), Positives = 104/218 (47%)

Query: 456 MQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARN 515
           +Q +   PD   ++++++  G+      A   F  M    C+P   ++N+++A  ++   
Sbjct: 92  LQGSMFKPDVGCFNMLMDAYGRTKQWTEAENTFHLMKKFQCLPTETSFNVLMAAYSRGGQ 151

Query: 516 YQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGL 575
            + A ++  +M+ +   P  VTY+  +EVL   G    AE VF EM+ +   P    + L
Sbjct: 152 LERAERVLHEMKESNCSPGLVTYNTYLEVLNKSGSWQLAEDVFREMQNRGVPPAVNTFTL 211

Query: 576 LVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLG 635
           +++++GKA +  KA   +++M +A   P++ T  +L++A  R G    A  +   + ++G
Sbjct: 212 MINIYGKAHHSAKAEHLFQSMRKALCPPSLFTYTALINAHAREGNCVRAEEIFAELQSVG 271

Query: 636 LKPSLQTYTLLLSCCTEARSPYDMGFCHELMAVSGHPA 673
             P + TY  LL   +    P       E M  +G  A
Sbjct: 272 FVPDIYTYNALLEAYSRGGHPAGAKEVFETMLEAGVKA 309


>gi|302775071|ref|XP_002970952.1| hypothetical protein SELMODRAFT_441328 [Selaginella moellendorffii]
 gi|300161663|gb|EFJ28278.1| hypothetical protein SELMODRAFT_441328 [Selaginella moellendorffii]
          Length = 698

 Score =  168 bits (426), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 88/277 (31%), Positives = 153/277 (55%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           G   D HTYT +V  L + ++      L++++  +GC P + TYN L++   +   L EA
Sbjct: 254 GCTIDIHTYTAIVNWLAKNKKIQEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEA 313

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
           +D+ +++   GC PD VTY +LID   K      A  ++K+M + GL+ DT  Y+ +I  
Sbjct: 314 IDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMASRGLALDTVCYTALIRG 373

Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPD 534
           L + G +  A  ++  M + GC+P++VT + MI   +KA    +A+++++ M+  G  P+
Sbjct: 374 LLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPN 433

Query: 535 KVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYE 594
           +V YS ++  L     +D A  + A+M++    PD   Y +L+D   K+G+V  A  +++
Sbjct: 434 EVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFD 493

Query: 595 AMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGM 631
            ML+AG +P+V T N L+S   + G    A  +L  M
Sbjct: 494 EMLEAGCKPDVYTYNILISGLCKAGNTDAACGVLDDM 530



 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 94/323 (29%), Positives = 153/323 (47%), Gaps = 31/323 (9%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           G   D  TYT+++  LG+ ++     KL  +M   G   + V Y  LI    +   + +A
Sbjct: 324 GCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMASRGLALDTVCYTALIRGLLQTGKIPQA 383

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
             V+K M   GC PD VT  T+ID  +KAG +  A+ ++K M+A GL+P+   YS +I+ 
Sbjct: 384 SSVYKTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHG 443

Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPD 534
           L KA  +  A ++  +M    C P+ +TYNI+I    K+ + ++A   + +M  AG +PD
Sbjct: 444 LCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLEAGCKPD 503

Query: 535 KVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGL------------------- 575
             TY+I++  L   G  D A  V  +M    +V    V GL                   
Sbjct: 504 VYTYNILISGLCKAGNTDAACGVLDDMSSSRFVYSSLVDGLCKSGKLEGGCMLFHEMERS 563

Query: 576 ----------LVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAY 625
                     L+    KA  V +A   + A+ + G+ P+    NS++SA ++ G++++  
Sbjct: 564 GVANSQTRTRLIFHLCKANRVDEAVSLFNAIRKEGM-PHPYAYNSIISALIKSGKVNEGQ 622

Query: 626 HLLQGMLNLGLKPSLQTYTLLLS 648
            + Q M     KP   TY  LL+
Sbjct: 623 AVYQEMTRW-WKPDRVTYNALLN 644



 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 84/306 (27%), Positives = 144/306 (47%), Gaps = 2/306 (0%)

Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLI 402
           A+  F  +RR         T++ ++  L +A      + L  +   +GC  ++ TY  ++
Sbjct: 209 AMDHFEAVRRS--MPVSAATFSILINGLVKAGMMIQAHSLAQETTTNGCTIDIHTYTAIV 266

Query: 403 HSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLS 462
           +   +   + EA+ + +++   GC P   TY  L++   K G L+ A+D+ +K+   G +
Sbjct: 267 NWLAKNKKIQEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCT 326

Query: 463 PDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKL 522
           PD  TY+ +I+ LGK      A++LF EM ++G   + V Y  +I    +      A  +
Sbjct: 327 PDVVTYTSLIDGLGKEKRSFEAYKLFKEMASRGLALDTVCYTALIRGLLQTGKIPQASSV 386

Query: 523 YRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGK 582
           Y+ M + G  PD VT S +++ L   G +  A  +F  M  +   P+E VY  L+    K
Sbjct: 387 YKTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCK 446

Query: 583 AGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQT 642
           A  +  A E    M +A   P+  T N L+    + G +  A      ML  G KP + T
Sbjct: 447 ARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLEAGCKPDVYT 506

Query: 643 YTLLLS 648
           Y +L+S
Sbjct: 507 YNILIS 512



 Score =  117 bits (294), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 90/349 (25%), Positives = 158/349 (45%), Gaps = 8/349 (2%)

Query: 385 QMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAG 444
           + VR     +  T++ LI+   +A  + +A  + ++    GC  D  TY  +++  AK  
Sbjct: 214 EAVRRSMPVSAATFSILINGLVKAGMMIQAHSLAQETTTNGCTIDIHTYTAIVNWLAKNK 273

Query: 445 FLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYN 504
            +  A+ + +K+ A G +P   TY+ ++N L K G L+ A  L  ++V+ GC P++VTY 
Sbjct: 274 KIQEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYT 333

Query: 505 IMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRK 564
            +I    K +    A KL+++M + G   D V Y+ ++  L   G + +A +V+  M   
Sbjct: 334 SLIDGLGKEKRSFEAYKLFKEMASRGLALDTVCYTALIRGLLQTGKIPQASSVYKTMTSH 393

Query: 565 NWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDA 624
             VPD      ++D   KAG +  A   +++M   GL PN    ++L+    +  ++  A
Sbjct: 394 GCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCA 453

Query: 625 YHLLQGMLNLGLKPSLQTYTLLLS-CCTEARSPYDMGFCHELMAVSGHPAHMFLLSMPSP 683
             +L  M      P   TY +L+   C          F  E++     P  ++  ++   
Sbjct: 454 LEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLEAGCKP-DVYTYNILIS 512

Query: 684 GPDGQNVRDHVGSFLEMMHSEDRESKRGLVDAVVDFLHKSGLKEEAGSV 732
           G       D     L     +D  S R +  ++VD L KSG K E G +
Sbjct: 513 GLCKAGNTDAACGVL-----DDMSSSRFVYSSLVDGLCKSG-KLEGGCM 555



 Score =  117 bits (294), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 93/376 (24%), Positives = 160/376 (42%), Gaps = 36/376 (9%)

Query: 315 EEALGNTNYSMDAYQANQVLKQLQDHTVALGFFNWLRR-QAGFKHDEHTYTTMVGILGRA 373
           E AL      +      ++ + L+D  +A   F  L   + GF+H  HT   ++ +  R 
Sbjct: 73  EAALDRLRREISTDAVVKIFQCLKDADLAWELFQCLSSPRFGFQHSVHTGNALLDVFART 132

Query: 374 RQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQ----------- 422
           ++      LL   +    +P+V T+N LI  Y  A    EA  V ++M+           
Sbjct: 133 KRHREAGNLLKNELATIFRPDVETWNVLITGYCLAREPEEAFAVIREMEEDFGVAPSLKT 192

Query: 423 ----VVG-CEPDRV-------------------TYCTLIDIHAKAGFLDVAMDMYKKMQA 458
               + G C+  +V                   T+  LI+   KAG +  A  + ++   
Sbjct: 193 HNLVLHGLCKSGKVLAAMDHFEAVRRSMPVSAATFSILINGLVKAGMMIQAHSLAQETTT 252

Query: 459 AGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQS 518
            G + D  TY+ I+N L K   +Q A  L  ++   GC P + TYN ++    K    + 
Sbjct: 253 NGCTIDIHTYTAIVNWLAKNKKIQEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEE 312

Query: 519 ALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVD 578
           A+ L R + + G  PD VTY+ +++ LG      EA  +F EM  +    D   Y  L+ 
Sbjct: 313 AIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMASRGLALDTVCYTALIR 372

Query: 579 LWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKP 638
              + G + +A   Y+ M   G  P+V T ++++    + G++  A  + + M   GL P
Sbjct: 373 GLLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAP 432

Query: 639 SLQTYTLLLSCCTEAR 654
           +   Y+ L+    +AR
Sbjct: 433 NEVVYSALIHGLCKAR 448



 Score = 93.6 bits (231), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 77/313 (24%), Positives = 125/313 (39%), Gaps = 78/313 (24%)

Query: 329 QANQVLKQLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVR 388
           QA+ V K +  H              G   D  T +TM+  L +A + GA  ++   M  
Sbjct: 382 QASSVYKTMTSH--------------GCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEA 427

Query: 389 DGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDV 448
            G  PN V Y+ LIH   +A  ++ AL++  QM+   C PD +TY  LID   K+G ++ 
Sbjct: 428 RGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEA 487

Query: 449 AMDMYKKMQAAGLSPDTFTYSVIINCLGKAGH---------------------------- 480
           A   + +M  AG  PD +TY+++I+ L KAG+                            
Sbjct: 488 ARAFFDEMLEAGCKPDVYTYNILISGLCKAGNTDAACGVLDDMSSSRFVYSSLVDGLCKS 547

Query: 481 --LQAAHQLFCEMVNQGC---------------------------------IPNLVTYNI 505
             L+    LF EM   G                                  +P+   YN 
Sbjct: 548 GKLEGGCMLFHEMERSGVANSQTRTRLIFHLCKANRVDEAVSLFNAIRKEGMPHPYAYNS 607

Query: 506 MIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKN 565
           +I+   K+        +Y++M    ++PD+VTY+ ++  +     +D A   + EM  + 
Sbjct: 608 IISALIKSGKVNEGQAVYQEMTR-WWKPDRVTYNALLNGMIGANRMDRAHYYYLEMTGRG 666

Query: 566 WVPDEPVYGLLVD 578
           +VP   +   L D
Sbjct: 667 YVPPVSILHKLAD 679


>gi|449476143|ref|XP_004154653.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At5g01110-like [Cucumis sativus]
          Length = 749

 Score =  167 bits (424), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 94/295 (31%), Positives = 154/295 (52%)

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
           Q G   +  TY T++  + R        ++ D+M R G  P++V+++ LI    R  +L 
Sbjct: 355 QLGLTPNAATYNTLLVEICRRDNILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLY 414

Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
           +AL  F++M+  G  PD V Y  LID   + G L  A+ M  +M A G   D  TY+  +
Sbjct: 415 QALMHFREMERSGIVPDNVIYTILIDGFCRNGALSDALKMRDEMLARGCFMDVVTYNTFL 474

Query: 473 NCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFE 532
           N L K      A  LF EMV +G +P+  T+  +I    K  N   AL L+  M     +
Sbjct: 475 NGLCKKKMFADADMLFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLK 534

Query: 533 PDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEW 592
           PDKVTY+ +++     G +  A+ ++ +M RK+ +PD   YG +++ +  +G + +A   
Sbjct: 535 PDKVTYNTLIDGFCKAGEMGRAKELWDDMIRKDIIPDHISYGTVLNGFCSSGLLPEALNL 594

Query: 593 YEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
            + ML+ G+RPN+ TCN+L+  + R G +  AY  L  M++ G+ P   +Y  L+
Sbjct: 595 CDQMLEKGIRPNLVTCNTLIKGYCRSGDMPKAYEYLSKMISNGIIPDSFSYNTLI 649



 Score =  154 bits (388), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 122/446 (27%), Positives = 213/446 (47%), Gaps = 48/446 (10%)

Query: 362 TYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQM 421
           TY  ++  L +  ++     +L +M++ G  PN  TYN L+    R + + EA ++F +M
Sbjct: 329 TYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYNTLLVEICRRDNILEAQEIFDEM 388

Query: 422 QVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHL 481
              G  PD V++ +LI + A+ G L  A+  +++M+ +G+ PD   Y+++I+   + G L
Sbjct: 389 SRRGVLPDLVSFSSLIGVLARNGHLYQALMHFREMERSGIVPDNVIYTILIDGFCRNGAL 448

Query: 482 QAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIV 541
             A ++  EM+ +GC  ++VTYN  +    K + +  A  L+ +M   G  PD  T++ +
Sbjct: 449 SDALKMRDEMLARGCFMDVVTYNTFLNGLCKKKMFADADMLFNEMVERGMVPDFYTFTTL 508

Query: 542 MEVLGHC--GYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQA 599
           +   G+C  G +D+A  +F  M R N  PD+  Y  L+D + KAG + +A E ++ M++ 
Sbjct: 509 IR--GYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLIDGFCKAGEMGRAKELWDDMIRK 566

Query: 600 GLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDM 659
            + P+  +  ++L+ F   G L +A +L   ML  G++P+L T   L+            
Sbjct: 567 DIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKGIRPNLVTCNTLIK----------- 615

Query: 660 GFCHELMAVSGH--PAHMFLLSMPSPG--PDGQNVRDHVGSFLEMMHSE------DRESK 709
           G+C      SG    A+ +L  M S G  PD  +    +  +L+  + E      +   K
Sbjct: 616 GYCR-----SGDMPKAYEYLSKMISNGIIPDSFSYNTLIDGYLKEANLEKAFILINEMEK 670

Query: 710 RGLVDAVVDF------LHKSGLKEEAGSVWEVAAQKNVYPDAVKEKGMSY-WLINLHVMS 762
           RGL   ++ +          G  +EA  V     +  + PD     G +Y  LIN HV  
Sbjct: 671 RGLQFNIITYNLILNGFCAEGKMQEAEQVLRKMIEIGINPD-----GATYSSLINGHVSQ 725

Query: 763 DGTAVIALSRTLAWFRKQMLISGVGP 788
           D        +    F  +ML  G+ P
Sbjct: 726 DNM------KEAFRFHDEMLQRGLVP 745



 Score =  137 bits (345), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 115/468 (24%), Positives = 200/468 (42%), Gaps = 52/468 (11%)

Query: 335 KQLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPN 394
           K+L++ + A   F  LRR+ G     +    ++G L R        ++  ++VR G + N
Sbjct: 201 KKLREGSEA---FQILRRK-GVSVSINACNKLLGGLVRTGWVDLAWEIYGEVVRGGIELN 256

Query: 395 VVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYK 454
           V T N ++++  +       +     M+  G   D VTY TLI+ + + G ++ A  +  
Sbjct: 257 VYTLNIMVNALCKDRKFENVMFFLSDMEGKGVFADIVTYNTLINAYCREGLVEEAFQLLN 316

Query: 455 KMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKAR 514
              + G+ P   TY+ I+  L K G    A  +  EM+  G  PN  TYN ++    +  
Sbjct: 317 SFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYNTLLVEICRRD 376

Query: 515 NYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYG 574
           N   A +++ +M   G  PD V++S ++ VL   G+L +A   F EM R   VPD  +Y 
Sbjct: 377 NILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQALMHFREMERSGIVPDNVIYT 436

Query: 575 LLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNL 634
           +L+D + + G +  A +  + ML  G   +V T N+ L+   +    +DA  L   M+  
Sbjct: 437 ILIDGFCRNGALSDALKMRDEMLARGCFMDVVTYNTFLNGLCKKKMFADADMLFNEMVER 496

Query: 635 GLKPSLQTYTLLLSCCTEARSPYDMGFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHV 694
           G+ P   T+T L+            G+C                       DG    D  
Sbjct: 497 GMVPDFYTFTTLIR-----------GYCK----------------------DGN--MDKA 521

Query: 695 GSFLEMMHSEDRESKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAVKEKGMSYW 754
            +  E M   + +  +   + ++D   K+G    A  +W+   +K++ PD +     SY 
Sbjct: 522 LNLFEAMVRTNLKPDKVTYNTLIDGFCKAGEMGRAKELWDDMIRKDIIPDHI-----SYG 576

Query: 755 LINLHVMSDGTAVIALSRTLAWFRKQMLISGVGPSRI---DIVTGWGR 799
            +     S G    AL+        QML  G+ P+ +    ++ G+ R
Sbjct: 577 TVLNGFCSSGLLPEALNLC-----DQMLEKGIRPNLVTCNTLIKGYCR 619



 Score =  135 bits (341), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 88/308 (28%), Positives = 156/308 (50%), Gaps = 5/308 (1%)

Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLI 402
           AL  F  + R +G   D   YT ++    R        K+ D+M+  GC  +VVTYN  +
Sbjct: 416 ALMHFREMER-SGIVPDNVIYTILIDGFCRNGALSDALKMRDEMLARGCFMDVVTYNTFL 474

Query: 403 HSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLS 462
           +   +     +A  +F +M   G  PD  T+ TLI  + K G +D A+++++ M    L 
Sbjct: 475 NGLCKKKMFADADMLFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLK 534

Query: 463 PDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKL 522
           PD  TY+ +I+   KAG +  A +L+ +M+ +  IP+ ++Y  ++     +     AL L
Sbjct: 535 PDKVTYNTLIDGFCKAGEMGRAKELWDDMIRKDIIPDHISYGTVLNGFCSSGLLPEALNL 594

Query: 523 YRDMQNAGFEPDKVTYSIVMEVLGHC--GYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLW 580
              M   G  P+ VT + +++  G+C  G + +A    ++M     +PD   Y  L+D +
Sbjct: 595 CDQMLEKGIRPNLVTCNTLIK--GYCRSGDMPKAYEYLSKMISNGIIPDSFSYNTLIDGY 652

Query: 581 GKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSL 640
            K  N+ KA+     M + GL+ N+ T N +L+ F   G++ +A  +L+ M+ +G+ P  
Sbjct: 653 LKEANLEKAFILINEMEKRGLQFNIITYNLILNGFCAEGKMQEAEQVLRKMIEIGINPDG 712

Query: 641 QTYTLLLS 648
            TY+ L++
Sbjct: 713 ATYSSLIN 720



 Score =  126 bits (316), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 99/381 (25%), Positives = 178/381 (46%), Gaps = 29/381 (7%)

Query: 269 ERFSKPSREMKIPAGLAPFSRH---FASTGNVVESVSRILRQWKWGPLAEEALGNTNYSM 325
           E F + SR   +P  L  FS      A  G++ +++       + G + +  +      +
Sbjct: 383 EIFDEMSRRGVLP-DLVSFSSLIGVLARNGHLYQALMHFREMERSGIVPDNVI--YTILI 439

Query: 326 DAYQANQVLK---QLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKL 382
           D +  N  L    +++D  +A G F           D  TY T +  L + + F   + L
Sbjct: 440 DGFCRNGALSDALKMRDEMLARGCF----------MDVVTYNTFLNGLCKKKMFADADML 489

Query: 383 LDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAK 442
            ++MV  G  P+  T+  LI  Y +   +++AL++F+ M     +PD+VTY TLID   K
Sbjct: 490 FNEMVERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLIDGFCK 549

Query: 443 AGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVT 502
           AG +  A +++  M    + PD  +Y  ++N    +G L  A  L  +M+ +G  PNLVT
Sbjct: 550 AGEMGRAKELWDDMIRKDIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKGIRPNLVT 609

Query: 503 YNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEA--EAVFA- 559
            N +I    ++ +   A +    M + G  PD  +Y+ +++     GYL EA  E  F  
Sbjct: 610 CNTLIKGYCRSGDMPKAYEYLSKMISNGIIPDSFSYNTLID-----GYLKEANLEKAFIL 664

Query: 560 --EMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLR 617
             EM ++    +   Y L+++ +   G +++A +    M++ G+ P+  T +SL++  + 
Sbjct: 665 INEMEKRGLQFNIITYNLILNGFCAEGKMQEAEQVLRKMIEIGINPDGATYSSLINGHVS 724

Query: 618 VGQLSDAYHLLQGMLNLGLKP 638
              + +A+     ML  GL P
Sbjct: 725 QDNMKEAFRFHDEMLQRGLVP 745



 Score =  117 bits (293), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 71/255 (27%), Positives = 133/255 (52%), Gaps = 6/255 (2%)

Query: 353 QAGFKHDEHTYTTMV-GILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           + G   D +T+TT++ G         A+N L + MVR   +P+ VTYN LI  + +A  +
Sbjct: 495 ERGMVPDFYTFTTLIRGYCKDGNMDKALN-LFEAMVRTNLKPDKVTYNTLIDGFCKAGEM 553

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
             A +++  M      PD ++Y T+++    +G L  A+++  +M   G+ P+  T + +
Sbjct: 554 GRAKELWDDMIRKDIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKGIRPNLVTCNTL 613

Query: 472 INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF 531
           I    ++G +  A++   +M++ G IP+  +YN +I    K  N + A  L  +M+  G 
Sbjct: 614 IKGYCRSGDMPKAYEYLSKMISNGIIPDSFSYNTLIDGYLKEANLEKAFILINEMEKRGL 673

Query: 532 EPDKVTYSIVMEVLGHC--GYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKA 589
           + + +TY++++   G C  G + EAE V  +M      PD   Y  L++      N+++A
Sbjct: 674 QFNIITYNLILN--GFCAEGKMQEAEQVLRKMIEIGINPDGATYSSLINGHVSQDNMKEA 731

Query: 590 WEWYEAMLQAGLRPN 604
           + +++ MLQ GL P+
Sbjct: 732 FRFHDEMLQRGLVPD 746


>gi|197307740|gb|ACH60221.1| pentatricopeptide-containing protein [Pseudotsuga menziesii]
 gi|197307742|gb|ACH60222.1| pentatricopeptide-containing protein [Pseudotsuga menziesii]
 gi|197307744|gb|ACH60223.1| pentatricopeptide-containing protein [Pseudotsuga menziesii]
 gi|197307746|gb|ACH60224.1| pentatricopeptide-containing protein [Pseudotsuga menziesii]
 gi|197307748|gb|ACH60225.1| pentatricopeptide-containing protein [Pseudotsuga menziesii]
 gi|197307750|gb|ACH60226.1| pentatricopeptide-containing protein [Pseudotsuga menziesii]
 gi|197307752|gb|ACH60227.1| pentatricopeptide-containing protein [Pseudotsuga menziesii]
 gi|197307754|gb|ACH60228.1| pentatricopeptide-containing protein [Pseudotsuga menziesii]
 gi|197307762|gb|ACH60232.1| pentatricopeptide-containing protein [Pseudotsuga menziesii]
 gi|197307764|gb|ACH60233.1| pentatricopeptide-containing protein [Pseudotsuga menziesii]
 gi|197307766|gb|ACH60234.1| pentatricopeptide-containing protein [Pseudotsuga menziesii]
 gi|197307768|gb|ACH60235.1| pentatricopeptide-containing protein [Pseudotsuga menziesii]
 gi|197307770|gb|ACH60236.1| pentatricopeptide-containing protein [Pseudotsuga menziesii]
 gi|197307774|gb|ACH60238.1| pentatricopeptide-containing protein [Pseudotsuga menziesii]
 gi|197307776|gb|ACH60239.1| pentatricopeptide-containing protein [Pseudotsuga menziesii]
 gi|197307778|gb|ACH60240.1| pentatricopeptide-containing protein [Pseudotsuga menziesii]
 gi|197307780|gb|ACH60241.1| pentatricopeptide-containing protein [Pseudotsuga macrocarpa]
          Length = 107

 Score =  167 bits (424), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 72/104 (69%), Positives = 88/104 (84%)

Query: 753 YWLINLHVMSDGTAVIALSRTLAWFRKQMLISGVGPSRIDIVTGWGRRSRVTGTSLVRQA 812
           YWLINLHVMS GTA+IALSRTLAWFR+ ++ISG+GP RIDI+TGWGRRSRV G+SLV+Q+
Sbjct: 4   YWLINLHVMSIGTALIALSRTLAWFREHLIISGLGPDRIDIITGWGRRSRVMGSSLVKQS 63

Query: 813 VQELLHMFSFPFFTENGNSGCFVGCGEPLNKWLLQSYVDRMHLL 856
           ++ LL++F  PF  ++GNSGC VG G PL  WL Q YV+RMHLL
Sbjct: 64  IEHLLYLFESPFQVDDGNSGCLVGSGNPLTVWLHQPYVERMHLL 107


>gi|356547408|ref|XP_003542104.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g16010-like [Glycine max]
          Length = 631

 Score =  167 bits (424), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 106/372 (28%), Positives = 173/372 (46%), Gaps = 42/372 (11%)

Query: 286 PFSRHFASTGNVVESVSRILRQWKWGPLAEEALGNTNYSMDAYQANQVLKQLQDHTVALG 345
           P+SR       + E   RIL+ +KWGP AE+AL      +D     ++LK   + +V + 
Sbjct: 50  PYSR------TLDERFIRILKIFKWGPDAEKALEVLKLKVDPRLVREILKIDVEVSVKIQ 103

Query: 346 FFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSY 405
           FF W  ++  F+HD  TY  ++  L   R FG + K +  MV+  C       + ++   
Sbjct: 104 FFKWAGKRRNFEHDSTTYMALIRCLDEHRMFGEVWKTIQDMVKGSCAMAPAELSEIVRIL 163

Query: 406 GRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDT 465
           G+A  +N AL VF Q++   C                                    P  
Sbjct: 164 GKAKMVNRALSVFYQVKGRKCR-----------------------------------PTA 188

Query: 466 FTYSVIINCLGKAGHLQAAHQLFCEMVNQ-GCIPNLVTYNIMIALQAKARNYQSALKLYR 524
            TY+ II  L + GH +  H+L+ EM ++  C P+ VTY+ +I+  AK     SA++L+ 
Sbjct: 189 STYNSIILMLMQEGHHEKVHELYNEMCSEVHCFPDTVTYSALISAFAKLNRDDSAIRLFD 248

Query: 525 DMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAG 584
           +M+  G +P    Y+ +M +    G ++EA  +  EMR +  +     Y  L+   GK+G
Sbjct: 249 EMKENGLQPTAKIYTTLMGIYFKVGKVEEALGLVKEMRARRCLLTVFTYTELIRGLGKSG 308

Query: 585 NVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYT 644
            V  A+  Y+ ML+ G +P+V   N+L++   R   L DA  L   M  L   P++ TY 
Sbjct: 309 RVEDAYMTYKNMLKDGCKPDVVLMNNLINILGRSNHLRDAIKLFDEMKLLNCAPNVVTYN 368

Query: 645 LLLSCCTEARSP 656
            ++    EA++P
Sbjct: 369 TIIKSLFEAKAP 380



 Score =  149 bits (377), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 89/295 (30%), Positives = 159/295 (53%), Gaps = 5/295 (1%)

Query: 362 TYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQM 421
           TYT ++  LG++ +          M++DGC+P+VV  N LI+  GR+N+L +A+ +F +M
Sbjct: 296 TYTELIRGLGKSGRVEDAYMTYKNMLKDGCKPDVVLMNNLINILGRSNHLRDAIKLFDEM 355

Query: 422 QVVGCEPDRVTYCTLID--IHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAG 479
           +++ C P+ VTY T+I     AKA  L  A   +++M+  G+ P +FTYS++I+   K  
Sbjct: 356 KLLNCAPNVVTYNTIIKSLFEAKAP-LSEASSWFERMKKDGIVPSSFTYSILIDGYCKTN 414

Query: 480 HLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDM-QNAGFEPDKVTY 538
            ++ A  L  EM  +G  P    Y  +I     A+ Y  A +L++++ +N G    +V Y
Sbjct: 415 RVEKALLLLEEMDEKGFPPCPAAYCSLINTLGVAKRYDVANELFQELKENCGCSSARV-Y 473

Query: 539 SIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQ 598
           +++++  G CG L+EA  +F EM++    PD   Y  L+    +A  + +A+  +  M +
Sbjct: 474 AVMIKHFGKCGRLNEAINLFNEMKKLGCTPDVYAYNALMTGMVRAERMDEAFSLFRTMEE 533

Query: 599 AGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEA 653
            G  P++ + N +L+   R G    A  +   M N  +KP + ++  +L C + A
Sbjct: 534 NGCTPDINSHNIILNGLARTGGPKGALEMFTKMKNSTIKPDVVSFNTILGCLSRA 588



 Score =  137 bits (344), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 91/296 (30%), Positives = 143/296 (48%), Gaps = 3/296 (1%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANY-LNE 413
           G K D      ++ ILGR+       KL D+M    C PNVVTYN +I S   A   L+E
Sbjct: 324 GCKPDVVLMNNLINILGRSNHLRDAIKLFDEMKLLNCAPNVVTYNTIIKSLFEAKAPLSE 383

Query: 414 ALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIIN 473
           A   F++M+  G  P   TY  LID + K   ++ A+ + ++M   G  P    Y  +IN
Sbjct: 384 ASSWFERMKKDGIVPSSFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLIN 443

Query: 474 CLGKAGHLQAAHQLFCEMV-NQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFE 532
            LG A     A++LF E+  N GC    V Y +MI    K      A+ L+ +M+  G  
Sbjct: 444 TLGVAKRYDVANELFQELKENCGCSSARV-YAVMIKHFGKCGRLNEAINLFNEMKKLGCT 502

Query: 533 PDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEW 592
           PD   Y+ +M  +     +DEA ++F  M      PD   + ++++   + G  + A E 
Sbjct: 503 PDVYAYNALMTGMVRAERMDEAFSLFRTMEENGCTPDINSHNIILNGLARTGGPKGALEM 562

Query: 593 YEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
           +  M  + ++P+V + N++L    R G   +A  L+Q M + G +  L TY+ +L 
Sbjct: 563 FTKMKNSTIKPDVVSFNTILGCLSRAGLFEEAAKLMQEMSSKGFQYDLITYSSILE 618



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 82/307 (26%), Positives = 147/307 (47%), Gaps = 2/307 (0%)

Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLI 402
           A+  F+ ++ + G +     YTT++GI  +  +      L+ +M    C   V TY  LI
Sbjct: 243 AIRLFDEMK-ENGLQPTAKIYTTLMGIYFKVGKVEEALGLVKEMRARRCLLTVFTYTELI 301

Query: 403 HSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLS 462
              G++  + +A   +K M   GC+PD V    LI+I  ++  L  A+ ++ +M+    +
Sbjct: 302 RGLGKSGRVEDAYMTYKNMLKDGCKPDVVLMNNLINILGRSNHLRDAIKLFDEMKLLNCA 361

Query: 463 PDTFTYSVIINCLGKA-GHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALK 521
           P+  TY+ II  L +A   L  A   F  M   G +P+  TY+I+I    K    + AL 
Sbjct: 362 PNVVTYNTIIKSLFEAKAPLSEASSWFERMKKDGIVPSSFTYSILIDGYCKTNRVEKALL 421

Query: 522 LYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWG 581
           L  +M   GF P    Y  ++  LG     D A  +F E++         VY +++  +G
Sbjct: 422 LLEEMDEKGFPPCPAAYCSLINTLGVAKRYDVANELFQELKENCGCSSARVYAVMIKHFG 481

Query: 582 KAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQ 641
           K G + +A   +  M + G  P+V   N+L++  +R  ++ +A+ L + M   G  P + 
Sbjct: 482 KCGRLNEAINLFNEMKKLGCTPDVYAYNALMTGMVRAERMDEAFSLFRTMEENGCTPDIN 541

Query: 642 TYTLLLS 648
           ++ ++L+
Sbjct: 542 SHNIILN 548



 Score =  128 bits (321), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 85/325 (26%), Positives = 158/325 (48%), Gaps = 39/325 (12%)

Query: 362 TYTTMVGILGRARQFGAINKLLDQMVRD-GCQPNVVTYNRLIHSYGRANYLNEALDVFKQ 420
           TY +++ +L +      +++L ++M  +  C P+ VTY+ LI ++ + N  + A+ +F +
Sbjct: 190 TYNSIILMLMQEGHHEKVHELYNEMCSEVHCFPDTVTYSALISAFAKLNRDDSAIRLFDE 249

Query: 421 MQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGH 480
           M+  G +P    Y TL+ I+ K G ++ A+ + K+M+A       FTY+ +I  LGK+G 
Sbjct: 250 MKENGLQPTAKIYTTLMGIYFKVGKVEEALGLVKEMRARRCLLTVFTYTELIRGLGKSGR 309

Query: 481 LQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSI 540
           ++ A+  +  M+  GC P++V  N +I +  ++ + + A+KL+ +M+     P+ VTY+ 
Sbjct: 310 VEDAYMTYKNMLKDGCKPDVVLMNNLINILGRSNHLRDAIKLFDEMKLLNCAPNVVTYNT 369

Query: 541 VMEVLGHC-GYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQA 599
           +++ L      L EA + F  M++   VP    Y +L+D + K   V KA    E M + 
Sbjct: 370 IIKSLFEAKAPLSEASSWFERMKKDGIVPSSFTYSILIDGYCKTNRVEKALLLLEEMDEK 429

Query: 600 GLRPNVPT------------------------------CNS------LLSAFLRVGQLSD 623
           G  P  P                               C+S      ++  F + G+L++
Sbjct: 430 GF-PPCPAAYCSLINTLGVAKRYDVANELFQELKENCGCSSARVYAVMIKHFGKCGRLNE 488

Query: 624 AYHLLQGMLNLGLKPSLQTYTLLLS 648
           A +L   M  LG  P +  Y  L++
Sbjct: 489 AINLFNEMKKLGCTPDVYAYNALMT 513



 Score =  116 bits (290), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 57/195 (29%), Positives = 113/195 (57%), Gaps = 2/195 (1%)

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRD-GCQPNVVTYNRLIHSYGRANYL 411
           + GF      Y +++  LG A+++   N+L  ++  + GC    V Y  +I  +G+   L
Sbjct: 428 EKGFPPCPAAYCSLINTLGVAKRYDVANELFQELKENCGCSSARV-YAVMIKHFGKCGRL 486

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
           NEA+++F +M+ +GC PD   Y  L+    +A  +D A  +++ M+  G +PD  ++++I
Sbjct: 487 NEAINLFNEMKKLGCTPDVYAYNALMTGMVRAERMDEAFSLFRTMEENGCTPDINSHNII 546

Query: 472 INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF 531
           +N L + G  + A ++F +M N    P++V++N ++   ++A  ++ A KL ++M + GF
Sbjct: 547 LNGLARTGGPKGALEMFTKMKNSTIKPDVVSFNTILGCLSRAGLFEEAAKLMQEMSSKGF 606

Query: 532 EPDKVTYSIVMEVLG 546
           + D +TYS ++E +G
Sbjct: 607 QYDLITYSSILEAVG 621



 Score =  103 bits (257), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 61/243 (25%), Positives = 122/243 (50%), Gaps = 4/243 (1%)

Query: 348 NWLRR--QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSY 405
           +W  R  + G      TY+ ++    +  +      LL++M   G  P    Y  LI++ 
Sbjct: 386 SWFERMKKDGIVPSSFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINTL 445

Query: 406 GRANYLNEALDVFKQMQV-VGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPD 464
           G A   + A ++F++++   GC   RV Y  +I    K G L+ A++++ +M+  G +PD
Sbjct: 446 GVAKRYDVANELFQELKENCGCSSARV-YAVMIKHFGKCGRLNEAINLFNEMKKLGCTPD 504

Query: 465 TFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYR 524
            + Y+ ++  + +A  +  A  LF  M   GC P++ ++NI++   A+    + AL+++ 
Sbjct: 505 VYAYNALMTGMVRAERMDEAFSLFRTMEENGCTPDINSHNIILNGLARTGGPKGALEMFT 564

Query: 525 DMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAG 584
            M+N+  +PD V+++ ++  L   G  +EA  +  EM  K +  D   Y  +++  GK  
Sbjct: 565 KMKNSTIKPDVVSFNTILGCLSRAGLFEEAAKLMQEMSSKGFQYDLITYSSILEAVGKVD 624

Query: 585 NVR 587
           + +
Sbjct: 625 DCK 627


>gi|449481246|ref|XP_004156125.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At2g02150-like [Cucumis
           sativus]
          Length = 822

 Score =  167 bits (424), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 126/509 (24%), Positives = 221/509 (43%), Gaps = 68/509 (13%)

Query: 338 QDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMV---------- 387
           +D  +AL FF W   Q GF+H   +Y  +V ++ RAR +   +  + +++          
Sbjct: 82  EDPKLALKFFKWAGSQVGFRHTTESYCIIVHLVFRARMYTDAHDTVKEVIMNSRMDMGFP 141

Query: 388 -----------RDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQM--------------- 421
                      R+ C      ++ L   +     L EA + F +M               
Sbjct: 142 VCNIFDMLWSTRNICVSGSGVFDVLFSVFVELGLLEEANECFSRMRNFRTLPKARSCNFL 201

Query: 422 ----------QVV----------GCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGL 461
                     Q+V          G  P   TY  +ID   K G L+ +  ++ +M+  GL
Sbjct: 202 LHRLSKSGNGQLVRKFFNDMIGAGIAPSVFTYNVMIDYLCKEGDLENSRRLFVQMREMGL 261

Query: 462 SPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALK 521
           SPD  TY+ +I+  GK G L+    LF EM + GC+P+++TYN +I    K      A +
Sbjct: 262 SPDVVTYNSLIDGYGKVGSLEEVASLFNEMKDVGCVPDIITYNGLINCYCKFEKMPRAFE 321

Query: 522 LYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWG 581
            + +M+N G +P+ VTYS +++     G +  A  +  +MRR   +P+E  Y  L+D   
Sbjct: 322 YFSEMKNNGLKPNVVTYSTLIDAFCKEGMMQGAIKLLXDMRRTGLLPNEFTYTSLIDANC 381

Query: 582 KAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQ 641
           KAGN+ +AW+    MLQAG++ N+ T  +LL    + G++ +A  + + ML  G+ P+ Q
Sbjct: 382 KAGNLTEAWKLLNDMLQAGVKLNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQ 441

Query: 642 TYTLLLSCCTEARSPYD-MGFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEM 700
            YT L+    +A    D M    ++   +  P  + L      G   Q   +     LE 
Sbjct: 442 VYTALVHGYIKAERMEDAMKILKQMTECNIKP-DLILYGSIIWGHCSQRKLEETKLILEE 500

Query: 701 MHSEDRESKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAVKEKGMSYWLINLHV 760
           M S    +   +   ++D   K+G   +A + ++           +++ G+   ++   V
Sbjct: 501 MKSRGISANPVISTTIIDAYFKAGKSSDALNFFQ----------EMQDVGVEATIVTYCV 550

Query: 761 MSDGTAVIALSRTLAWFRKQMLISGVGPS 789
           + DG     +      +  +ML  G+ P+
Sbjct: 551 LIDGLCEAGIVELAVDYFCRMLSLGLQPN 579



 Score =  126 bits (316), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 84/310 (27%), Positives = 141/310 (45%), Gaps = 35/310 (11%)

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
           QAG K +  TYT ++  L +A +     ++   M++DG  PN   Y  L+H Y +A  + 
Sbjct: 398 QAGVKLNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTALVHGYIKAERME 457

Query: 413 EALDVFKQMQVVGCEPDRVTY-----------------------------------CTLI 437
           +A+ + KQM     +PD + Y                                    T+I
Sbjct: 458 DAMKILKQMTECNIKPDLILYGSIIWGHCSQRKLEETKLILEEMKSRGISANPVISTTII 517

Query: 438 DIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCI 497
           D + KAG    A++ +++MQ  G+     TY V+I+ L +AG ++ A   FC M++ G  
Sbjct: 518 DAYFKAGKSSDALNFFQEMQDVGVEATIVTYCVLIDGLCEAGIVELAVDYFCRMLSLGLQ 577

Query: 498 PNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAV 557
           PN+  Y  +I         +SA KL+ +MQ  G  PD   ++ +++     G L EA  +
Sbjct: 578 PNVAVYTSLIDGLCXNNCIESAKKLFDEMQCRGMTPDITAFTALIDGNLKHGNLQEALVL 637

Query: 558 FAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLR 617
            + M       D  VY  LV  + + G + +A +++  M++ G+ P    C  LL  + +
Sbjct: 638 ISRMTELAIEFDLHVYTSLVSGFSQCGELHQARKFFNEMIEKGILPEEVLCICLLREYYK 697

Query: 618 VGQLSDAYHL 627
            GQL +A  L
Sbjct: 698 RGQLDEAIEL 707



 Score =  122 bits (305), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 93/335 (27%), Positives = 150/335 (44%), Gaps = 18/335 (5%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           R+ G   +E TYT+++    +A       KLL+ M++ G + N+VTY  L+    +A  +
Sbjct: 362 RRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQAGVKLNIVTYTALLDGLCKAGRM 421

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
            EA +VF+ M   G  P++  Y  L+  + KA  ++ AM + K+M    + PD   Y  I
Sbjct: 422 IEAEEVFRSMLKDGISPNQQVYTALVHGYIKAERMEDAMKILKQMTECNIKPDLILYGSI 481

Query: 472 INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF 531
           I        L+    +  EM ++G   N V    +I    KA     AL  +++MQ+ G 
Sbjct: 482 IWGHCSQRKLEETKLILEEMKSRGISANPVISTTIIDAYFKAGKSSDALNFFQEMQDVGV 541

Query: 532 EPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWE 591
           E   VTY ++++ L   G ++ A   F  M      P+  VY  L+D       +  A +
Sbjct: 542 EATIVTYCVLIDGLCEAGIVELAVDYFCRMLSLGLQPNVAVYTSLIDGLCXNNCIESAKK 601

Query: 592 WYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCT 651
            ++ M   G+ P++    +L+   L+ G L +A  L+  M  L ++  L  YT L+S   
Sbjct: 602 LFDEMQCRGMTPDITAFTALIDGNLKHGNLQEALVLISRMTELAIEFDLHVYTSLVS--- 658

Query: 652 EARSPYDMGF--CHELMAVSGHPAHMFLLSMPSPG 684
                   GF  C EL     H A  F   M   G
Sbjct: 659 --------GFSQCGEL-----HQARKFFNEMIEKG 680



 Score = 76.6 bits (187), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 60/246 (24%), Positives = 104/246 (42%), Gaps = 35/246 (14%)

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
           +   K D   Y +++      R+      +L++M   G   N V    +I +Y +A   +
Sbjct: 468 ECNIKPDLILYGSIIWGHCSQRKLEETKLILEEMKSRGISANPVISTTIIDAYFKAGKSS 527

Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMD--------------------- 451
           +AL+ F++MQ VG E   VTYC LID   +AG +++A+D                     
Sbjct: 528 DALNFFQEMQDVGVEATIVTYCVLIDGLCEAGIVELAVDYFCRMLSLGLQPNVAVYTSLI 587

Query: 452 --------------MYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCI 497
                         ++ +MQ  G++PD   ++ +I+   K G+LQ A  L   M      
Sbjct: 588 DGLCXNNCIESAKKLFDEMQCRGMTPDITAFTALIDGNLKHGNLQEALVLISRMTELAIE 647

Query: 498 PNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAV 557
            +L  Y  +++  ++      A K + +M   G  P++V    ++      G LDEA  +
Sbjct: 648 FDLHVYTSLVSGFSQCGELHQARKFFNEMIEKGILPEEVLCICLLREYYKRGQLDEAIEL 707

Query: 558 FAEMRR 563
             EM R
Sbjct: 708 KNEMER 713



 Score = 72.0 bits (175), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 51/192 (26%), Positives = 85/192 (44%), Gaps = 7/192 (3%)

Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLD---QMVRDGCQPNVVTYN 399
           AL FF  ++   G +    TY  ++  L  A   G +   +D   +M+  G QPNV  Y 
Sbjct: 529 ALNFFQEMQ-DVGVEATIVTYCVLIDGLCEA---GIVELAVDYFCRMLSLGLQPNVAVYT 584

Query: 400 RLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAA 459
            LI      N +  A  +F +MQ  G  PD   +  LID + K G L  A+ +  +M   
Sbjct: 585 SLIDGLCXNNCIESAKKLFDEMQCRGMTPDITAFTALIDGNLKHGNLQEALVLISRMTEL 644

Query: 460 GLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSA 519
            +  D   Y+ +++   + G L  A + F EM+ +G +P  V    ++    K      A
Sbjct: 645 AIEFDLHVYTSLVSGFSQCGELHQARKFFNEMIEKGILPEEVLCICLLREYYKRGQLDEA 704

Query: 520 LKLYRDMQNAGF 531
           ++L  +M+   +
Sbjct: 705 IELKNEMERMAY 716


>gi|242083798|ref|XP_002442324.1| hypothetical protein SORBIDRAFT_08g018230 [Sorghum bicolor]
 gi|241943017|gb|EES16162.1| hypothetical protein SORBIDRAFT_08g018230 [Sorghum bicolor]
          Length = 647

 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 129/515 (25%), Positives = 237/515 (46%), Gaps = 26/515 (5%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           G   D +TY T V  + +        +++  M  +  +PNVVTY+ L+  + +    +EA
Sbjct: 124 GSGRDIYTYNTFVDAICKCGNMELATQVVLDMEANNIKPNVVTYSTLMDGFSKLEKYDEA 183

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
           L + ++M+ +G + DRV Y TL+ I+ K G  D    + + M+  G+  DT TY+ +IN 
Sbjct: 184 LKLREKMKSLGIQLDRVCYNTLLAIYVKTGKYDEIATVCEDMENLGIEKDTVTYNSLING 243

Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPD 534
            GK G L     L  +M  QG  P+++TY+ +I + +KA  +  A  +Y D + +G + D
Sbjct: 244 YGKQGRLDMVAFLVQDMRAQGVAPSVLTYSTLIDIYSKAGMHGDAFNVYLDFKESGLKAD 303

Query: 535 KVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKA--------GNV 586
            V +S  ++ L   G ++ A ++  EM +    P+   Y  ++D +GK+        GN+
Sbjct: 304 VVLFSSFIDTLAKNGLVECALSLLDEMIKMGIKPNVVTYNTIIDAFGKSKILTEEDPGNM 363

Query: 587 RKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQ-LSDAYHLLQGMLNLGLKPSLQTYTL 645
                +   +++A   P      S     +R  Q L     L Q M+  G++P++ T++ 
Sbjct: 364 GIVGVYGGQIVRA-TNPVTRGGRSATDVRMRRSQELFFILELFQKMVQQGVRPNVVTFSA 422

Query: 646 LLSCCTEARSPYDMGFCHELMAVSGHP----AHMFLLSMPSPGPDGQNVRDHVGSFLEMM 701
           +L+ C+   +  D     E + +  +     A+  L+         +++ + +G      
Sbjct: 423 ILNACSRCNNFEDAALLLEQLRLFDNSVYGVAYGLLMGHLEAWSQARSLFNQLGRM---- 478

Query: 702 HSEDRESKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAVKEKGMSYWLINLHVM 761
              D  +     +A+ D L   G ++ A  V      + V+ +   +     + ++LH+M
Sbjct: 479 ---DSPTSSAFYNALTDVLWHFGQRQGAQQVVLEGVNRRVWENTWGD-----FCLDLHLM 530

Query: 762 SDGTAVIALSRTLAWFRKQMLISGVGPSRIDIVTGWGRRSRVTGTSLVRQAVQELLHMFS 821
           S G A   +   L   R  +      P  + I+TGWG+ S++ G+S +R+ ++ LL    
Sbjct: 531 SCGAAQAMVHAWLLNVRSIVFEGRAMPEFLSILTGWGKHSKIAGSSTLRRVIEALLLSIG 590

Query: 822 FPFFTENGNSGCFVGCGEPLNKWLLQSYVDRMHLL 856
            PF  E  N G FV     +  WL +S    + LL
Sbjct: 591 APFQVERFNIGRFVSPSALVAAWLRESGTVNILLL 625



 Score =  135 bits (339), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 82/282 (29%), Positives = 141/282 (50%), Gaps = 5/282 (1%)

Query: 385 QMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAG 444
           QM++DG  P+  T+N L+ +  RA +L +A  VF +M  +G   D  TY T +D   K G
Sbjct: 84  QMLQDGLCPDRKTFNSLLAACSRAGHLEDARTVFDEMIHLGSGRDIYTYNTFVDAICKCG 143

Query: 445 FLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYN 504
            +++A  +   M+A  + P+  TYS +++   K      A +L  +M + G   + V YN
Sbjct: 144 NMELATQVVLDMEANNIKPNVVTYSTLMDGFSKLEKYDEALKLREKMKSLGIQLDRVCYN 203

Query: 505 IMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRK 564
            ++A+  K   Y     +  DM+N G E D VTY+ ++   G  G LD    +  +MR +
Sbjct: 204 TLLAIYVKTGKYDEIATVCEDMENLGIEKDTVTYNSLINGYGKQGRLDMVAFLVQDMRAQ 263

Query: 565 NWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDA 624
              P    Y  L+D++ KAG    A+  Y    ++GL+ +V   +S +    + G +  A
Sbjct: 264 GVAPSVLTYSTLIDIYSKAGMHGDAFNVYLDFKESGLKADVVLFSSFIDTLAKNGLVECA 323

Query: 625 YHLLQGMLNLGLKPSLQTYTLLLSCCTEAR-----SPYDMGF 661
             LL  M+ +G+KP++ TY  ++    +++      P +MG 
Sbjct: 324 LSLLDEMIKMGIKPNVVTYNTIIDAFGKSKILTEEDPGNMGI 365



 Score =  120 bits (301), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 77/274 (28%), Positives = 133/274 (48%), Gaps = 1/274 (0%)

Query: 381 KLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIH 440
           +  D  + D     V  ++ LI +Y R+    EA+ V + M+  G  P  V+Y  +ID  
Sbjct: 9   RAFDSGIADRYGNTVFAHSALISAYARSGLATEAMGVLESMKGAGLRPTTVSYNAVIDAC 68

Query: 441 AKAGF-LDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPN 499
            K G  L   +  +++M   GL PD  T++ ++    +AGHL+ A  +F EM++ G   +
Sbjct: 69  GKGGVDLRFTLGYFRQMLQDGLCPDRKTFNSLLAACSRAGHLEDARTVFDEMIHLGSGRD 128

Query: 500 LVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFA 559
           + TYN  +    K  N + A ++  DM+    +P+ VTYS +M+        DEA  +  
Sbjct: 129 IYTYNTFVDAICKCGNMELATQVVLDMEANNIKPNVVTYSTLMDGFSKLEKYDEALKLRE 188

Query: 560 EMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVG 619
           +M+      D   Y  L+ ++ K G   +     E M   G+  +  T NSL++ + + G
Sbjct: 189 KMKSLGIQLDRVCYNTLLAIYVKTGKYDEIATVCEDMENLGIEKDTVTYNSLINGYGKQG 248

Query: 620 QLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEA 653
           +L     L+Q M   G+ PS+ TY+ L+   ++A
Sbjct: 249 RLDMVAFLVQDMRAQGVAPSVLTYSTLIDIYSKA 282



 Score =  109 bits (272), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 78/310 (25%), Positives = 132/310 (42%), Gaps = 50/310 (16%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           +  G + D   Y T++ I  +  ++  I  + + M   G + + VTYN LI+ YG+   L
Sbjct: 191 KSLGIQLDRVCYNTLLAIYVKTGKYDEIATVCEDMENLGIEKDTVTYNSLINGYGKQGRL 250

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
           +    + + M+  G  P  +TY TLIDI++KAG    A ++Y   + +GL  D   +S  
Sbjct: 251 DMVAFLVQDMRAQGVAPSVLTYSTLIDIYSKAGMHGDAFNVYLDFKESGLKADVVLFSSF 310

Query: 472 INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMI------------------------ 507
           I+ L K G ++ A  L  EM+  G  PN+VTYN +I                        
Sbjct: 311 IDTLAKNGLVECALSLLDEMIKMGIKPNVVTYNTIIDAFGKSKILTEEDPGNMGIVGVYG 370

Query: 508 ----------------ALQAKARNYQS---ALKLYRDMQNAGFEPDKVTYSIVMEVLGHC 548
                           A   + R  Q     L+L++ M   G  P+ VT+S ++     C
Sbjct: 371 GQIVRATNPVTRGGRSATDVRMRRSQELFFILELFQKMVQQGVRPNVVTFSAILNACSRC 430

Query: 549 GYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTC 608
              ++A  +  ++R    + D  VYG+    +G      +AW    ++     R + PT 
Sbjct: 431 NNFEDAALLLEQLR----LFDNSVYGV---AYGLLMGHLEAWSQARSLFNQLGRMDSPTS 483

Query: 609 NSLLSAFLRV 618
           ++  +A   V
Sbjct: 484 SAFYNALTDV 493



 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 53/227 (23%), Positives = 100/227 (44%), Gaps = 18/227 (7%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           +++G K D   +++ +  L +         LLD+M++ G +PNVVTYN +I ++G++  L
Sbjct: 296 KESGLKADVVLFSSFIDTLAKNGLVECALSLLDEMIKMGIKPNVVTYNTIIDAFGKSKIL 355

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAM----------DMYKKMQAAGL 461
            E  +    M +VG    ++   T           DV M          ++++KM   G+
Sbjct: 356 TE--EDPGNMGIVGVYGGQIVRATNPVTRGGRSATDVRMRRSQELFFILELFQKMVQQGV 413

Query: 462 SPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIA-LQAKARNYQSAL 520
            P+  T+S I+N   +  + + A  L  ++         V Y +++  L+A    +  A 
Sbjct: 414 RPNVVTFSAILNACSRCNNFEDAALLLEQLRLFDNSVYGVAYGLLMGHLEA----WSQAR 469

Query: 521 KLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAE-MRRKNW 566
            L+  +           Y+ + +VL H G    A+ V  E + R+ W
Sbjct: 470 SLFNQLGRMDSPTSSAFYNALTDVLWHFGQRQGAQQVVLEGVNRRVW 516


>gi|242033891|ref|XP_002464340.1| hypothetical protein SORBIDRAFT_01g016560 [Sorghum bicolor]
 gi|241918194|gb|EER91338.1| hypothetical protein SORBIDRAFT_01g016560 [Sorghum bicolor]
          Length = 758

 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 124/428 (28%), Positives = 200/428 (46%), Gaps = 5/428 (1%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           GF+ D+ TY T V  L +        K++D M+++G  P+V TYN +I+   +   L+EA
Sbjct: 297 GFEPDQVTYNTFVHGLCQNGHVSHALKVMDLMLQEGHDPDVFTYNTVINCLSKNGELDEA 356

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
             +  QM   GC PD  T+ TLI   +    L+ A+D+ +++   GLSPD +T++++IN 
Sbjct: 357 KGIVNQMVDRGCLPDTTTFNTLIVALSSQNRLEEALDLARELTVKGLSPDVYTFNILINA 416

Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPD 534
           L K G      +LF EM + GC P+ VTYNI+I          +AL L  +M++ G    
Sbjct: 417 LCKVGDPHLGIRLFEEMKSSGCTPDEVTYNILIDHLCSMGKLGNALDLLNEMESNGCPRS 476

Query: 535 KVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYE 594
            VTY+ +++ L     ++EAE VF +M  +        +  L+D   KA  +  A E  E
Sbjct: 477 TVTYNTIIDALCKKMRIEEAEEVFDQMDAQGISRSAVTFNTLIDGLCKAKRIDDATELIE 536

Query: 595 AMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTY-TLLLSCCTEA 653
            M++ GL+PN  T NS+L+ + + G +  A  +L+ M   G +  + TY TL+   C   
Sbjct: 537 QMVKEGLQPNNITYNSILTHYCKQGNIKKAADILETMTANGFEIDVVTYGTLINGLCKAG 596

Query: 654 RSPYDMGFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRESKRGLV 713
           R+   +     +      P       +        N+RD +  F EM  +E  E    L 
Sbjct: 597 RTQVALKLLRGMRIKGIRPTPKAYNPVIQSLFRRNNLRDALNLFREM--TEVGEPPDALT 654

Query: 714 DAVV--DFLHKSGLKEEAGSVWEVAAQKNVYPDAVKEKGMSYWLINLHVMSDGTAVIALS 771
             +V        G  +EA         K   P+    + ++  L+NL +     + I L 
Sbjct: 655 YKIVFRSLCRGGGPIKEAFDFLVEMVNKGFMPEFSSFRMLAEGLLNLGMDDYLISAIELI 714

Query: 772 RTLAWFRK 779
              A FR+
Sbjct: 715 IEKAKFRE 722



 Score =  154 bits (390), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 96/338 (28%), Positives = 169/338 (50%), Gaps = 10/338 (2%)

Query: 315 EEALGNTNYSM-DAYQANQVLKQLQDHTV--------ALGFFNWLRRQAGFKHDEHTYTT 365
           E+ALG     + D ++ +QV      H +        AL   + L  Q G   D  TY T
Sbjct: 284 EDALGYIQQEIADGFEPDQVTYNTFVHGLCQNGHVSHALKVMD-LMLQEGHDPDVFTYNT 342

Query: 366 MVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVG 425
           ++  L +  +      +++QMV  GC P+  T+N LI +    N L EALD+ +++ V G
Sbjct: 343 VINCLSKNGELDEAKGIVNQMVDRGCLPDTTTFNTLIVALSSQNRLEEALDLARELTVKG 402

Query: 426 CEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAH 485
             PD  T+  LI+   K G   + + ++++M+++G +PD  TY+++I+ L   G L  A 
Sbjct: 403 LSPDVYTFNILINALCKVGDPHLGIRLFEEMKSSGCTPDEVTYNILIDHLCSMGKLGNAL 462

Query: 486 QLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVL 545
            L  EM + GC  + VTYN +I    K    + A +++  M   G     VT++ +++ L
Sbjct: 463 DLLNEMESNGCPRSTVTYNTIIDALCKKMRIEEAEEVFDQMDAQGISRSAVTFNTLIDGL 522

Query: 546 GHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNV 605
                +D+A  +  +M ++   P+   Y  ++  + K GN++KA +  E M   G   +V
Sbjct: 523 CKAKRIDDATELIEQMVKEGLQPNNITYNSILTHYCKQGNIKKAADILETMTANGFEIDV 582

Query: 606 PTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTY 643
            T  +L++   + G+   A  LL+GM   G++P+ + Y
Sbjct: 583 VTYGTLINGLCKAGRTQVALKLLRGMRIKGIRPTPKAY 620



 Score =  150 bits (378), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 94/329 (28%), Positives = 152/329 (46%), Gaps = 35/329 (10%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           G   DE T+TT++          A  ++  +M+  GC P  VT N LI+ Y +   + +A
Sbjct: 227 GVAPDETTFTTLMQGFIEEGSIEAALRVKAKMMEAGCSPTGVTVNVLINGYCKMGRVEDA 286

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
           L   +Q    G EPD+VTY T +    + G +  A+ +   M   G  PD FTY+ +INC
Sbjct: 287 LGYIQQEIADGFEPDQVTYNTFVHGLCQNGHVSHALKVMDLMLQEGHDPDVFTYNTVINC 346

Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPD 534
           L K G L  A  +  +MV++GC+P+  T+N +I   +     + AL L R++   G  PD
Sbjct: 347 LSKNGELDEAKGIVNQMVDRGCLPDTTTFNTLIVALSSQNRLEEALDLARELTVKGLSPD 406

Query: 535 KVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVD---LWGKAGN------ 585
             T++I++  L   G       +F EM+     PDE  Y +L+D     GK GN      
Sbjct: 407 VYTFNILINALCKVGDPHLGIRLFEEMKSSGCTPDEVTYNILIDHLCSMGKLGNALDLLN 466

Query: 586 --------------------------VRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVG 619
                                     + +A E ++ M   G+  +  T N+L+    +  
Sbjct: 467 EMESNGCPRSTVTYNTIIDALCKKMRIEEAEEVFDQMDAQGISRSAVTFNTLIDGLCKAK 526

Query: 620 QLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
           ++ DA  L++ M+  GL+P+  TY  +L+
Sbjct: 527 RIDDATELIEQMVKEGLQPNNITYNSILT 555



 Score =  132 bits (333), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 82/293 (27%), Positives = 140/293 (47%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           G + D   +  ++ +L    +   +  + ++M   G QP+VVT N LI +  RA+ +  A
Sbjct: 157 GVQADTVVFNHLLNVLVEGSKLKLLESVYNEMTGRGIQPDVVTLNTLIKALCRAHQVRTA 216

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
           + + ++M   G  PD  T+ TL+    + G ++ A+ +  KM  AG SP   T +V+IN 
Sbjct: 217 VLMLEEMSSHGVAPDETTFTTLMQGFIEEGSIEAALRVKAKMMEAGCSPTGVTVNVLING 276

Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPD 534
             K G ++ A     + +  G  P+ VTYN  +    +  +   ALK+   M   G +PD
Sbjct: 277 YCKMGRVEDALGYIQQEIADGFEPDQVTYNTFVHGLCQNGHVSHALKVMDLMLQEGHDPD 336

Query: 535 KVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYE 594
             TY+ V+  L   G LDEA+ +  +M  +  +PD   +  L+        + +A +   
Sbjct: 337 VFTYNTVINCLSKNGELDEAKGIVNQMVDRGCLPDTTTFNTLIVALSSQNRLEEALDLAR 396

Query: 595 AMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
            +   GL P+V T N L++A  +VG       L + M + G  P   TY +L+
Sbjct: 397 ELTVKGLSPDVYTFNILINALCKVGDPHLGIRLFEEMKSSGCTPDEVTYNILI 449



 Score =  126 bits (316), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 120/506 (23%), Positives = 207/506 (40%), Gaps = 68/506 (13%)

Query: 334 LKQLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQP 393
           L++  D   AL   N    +  F      Y  +V  LG A  F  +  L+ +M R+G Q 
Sbjct: 63  LREQSDPEAALRMLNSALAREDFAPSSAVYEEIVQKLGTAGAFDLMEGLVREMRREGHQV 122

Query: 394 NVVTYNRLIHSYGRANYLNEALD------------------------------------- 416
             V     + SY R    ++A+D                                     
Sbjct: 123 RAVVVRSFVESYARLRRFDDAVDLVLNQLDNDTFGVQADTVVFNHLLNVLVEGSKLKLLE 182

Query: 417 -VFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCL 475
            V+ +M   G +PD VT  TLI    +A  +  A+ M ++M + G++PD  T++ ++   
Sbjct: 183 SVYNEMTGRGIQPDVVTLNTLIKALCRAHQVRTAVLMLEEMSSHGVAPDETTFTTLMQGF 242

Query: 476 GKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDK 535
            + G ++AA ++  +M+  GC P  VT N++I    K    + AL   +     GFEPD+
Sbjct: 243 IEEGSIEAALRVKAKMMEAGCSPTGVTVNVLINGYCKMGRVEDALGYIQQEIADGFEPDQ 302

Query: 536 VTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEA 595
           VTY+  +  L   G++  A  V   M ++   PD   Y  +++   K G + +A      
Sbjct: 303 VTYNTFVHGLCQNGHVSHALKVMDLMLQEGHDPDVFTYNTVINCLSKNGELDEAKGIVNQ 362

Query: 596 MLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARS 655
           M+  G  P+  T N+L+ A     +L +A  L + +   GL P + T+ +L++   +   
Sbjct: 363 MVDRGCLPDTTTFNTLIVALSSQNRLEEALDLARELTVKGLSPDVYTFNILINALCKVGD 422

Query: 656 PYDMGFCHELMAVSGHPAHMFLLSMPSPGPDGQNVR-DH------VGSFLEMMHS-EDRE 707
           P+      E M  SG           +P     N+  DH      +G+ L++++  E   
Sbjct: 423 PHLGIRLFEEMKSSG----------CTPDEVTYNILIDHLCSMGKLGNALDLLNEMESNG 472

Query: 708 SKRGLV--DAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAVKEKGMSYWLINLHVMSDGT 765
             R  V  + ++D L K    EEA  V+          D +  +G+S   +  + + DG 
Sbjct: 473 CPRSTVTYNTIIDALCKKMRIEEAEEVF----------DQMDAQGISRSAVTFNTLIDGL 522

Query: 766 AVIALSRTLAWFRKQMLISGVGPSRI 791
                        +QM+  G+ P+ I
Sbjct: 523 CKAKRIDDATELIEQMVKEGLQPNNI 548



 Score =  121 bits (304), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 93/321 (28%), Positives = 147/321 (45%), Gaps = 21/321 (6%)

Query: 324 SMDAYQANQVLKQL---QDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAIN 380
           S D Y  N ++  L    D  + +  F  ++  +G   DE TY  ++  L    + G   
Sbjct: 404 SPDVYTFNILINALCKVGDPHLGIRLFEEMK-SSGCTPDEVTYNILIDHLCSMGKLGNAL 462

Query: 381 KLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIH 440
            LL++M  +GC  + VTYN +I +  +   + EA +VF QM   G     VT+ TLID  
Sbjct: 463 DLLNEMESNGCPRSTVTYNTIIDALCKKMRIEEAEEVFDQMDAQGISRSAVTFNTLIDGL 522

Query: 441 AKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNL 500
            KA  +D A ++ ++M   GL P+  TY+ I+    K G+++ A  +   M   G   ++
Sbjct: 523 CKAKRIDDATELIEQMVKEGLQPNNITYNSILTHYCKQGNIKKAADILETMTANGFEIDV 582

Query: 501 VTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAE 560
           VTY  +I    KA   Q ALKL R M+  G  P    Y+ V++ L     L +A  +F E
Sbjct: 583 VTYGTLINGLCKAGRTQVALKLLRGMRIKGIRPTPKAYNPVIQSLFRRNNLRDALNLFRE 642

Query: 561 MRRKNWVPDEPVYGLLV-DLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVG 619
           M      PD   Y ++   L    G +++A+++   M+  G  P                
Sbjct: 643 MTEVGEPPDALTYKIVFRSLCRGGGPIKEAFDFLVEMVNKGFMP---------------- 686

Query: 620 QLSDAYHLLQGMLNLGLKPSL 640
           + S    L +G+LNLG+   L
Sbjct: 687 EFSSFRMLAEGLLNLGMDDYL 707


>gi|218197756|gb|EEC80183.1| hypothetical protein OsI_22045 [Oryza sativa Indica Group]
          Length = 577

 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 129/491 (26%), Positives = 232/491 (47%), Gaps = 34/491 (6%)

Query: 367 VGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNE--ALDVFKQMQVV 424
           +G+  R+ +F    +LLD M     +P++V++N LI++  ++  L    AL++  +++  
Sbjct: 1   MGVYARSGRFDDARQLLDAMRDQDIEPDLVSFNTLINARAKSGCLAAGVALELLHEVRQA 60

Query: 425 GCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAA 484
           G  PD +TY TLI   ++   LD A+ ++++M A+   PD +TY+ +++  G+ G  Q A
Sbjct: 61  GLRPDAITYNTLISACSQGSNLDDAVAVFEEMIASECRPDLWTYNAMVSVHGRCGKAQEA 120

Query: 485 HQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEV 544
             +F E+V +G  P+ VTYN ++   AK  + +   ++  ++  AGF  D +TY+ ++ +
Sbjct: 121 ELMFKELVEKGFQPDAVTYNSLLYAFAKEGDVERVERVCEELVKAGFRKDGITYNTMIHM 180

Query: 545 LGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPN 604
            G  G LD A  ++ EMR     PD   Y +LVD  GK   + +A +  E M  AGL+P 
Sbjct: 181 YGKMGRLDLALGLYDEMRAIGCTPDAVTYTVLVDSLGKMDRISEAGKVLEEMADAGLKPT 240

Query: 605 VPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGFCHE 664
           + T ++L+ A+ + G+  DA      M+  G+KP    Y ++L     +     +   + 
Sbjct: 241 LVTFSALICAYAKSGRQDDAERTFDRMVESGVKPDRLAYLVMLDVFARSDETRKLMVLYR 300

Query: 665 LMAVSGHPA----HMFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRESKRGLVDAVV-DF 719
            M   G+      +  LL+  + G    N  D +   +     +D E+   +   V+   
Sbjct: 301 AMIKDGYKPDDGLYQVLLAALAKG----NEHDEIEGVI-----QDMEAVFEMNPLVISSI 351

Query: 720 LHKSGLKEEAGSVWEVAAQKNVYPDAVKEKGMSYWLINLHVMSDGTAVIALSRTLAWFRK 779
           L K+    +  S+ + A  +   PD   ++ ++  + +L V+S   + I  S        
Sbjct: 352 LIKAECISQGASLLKRACLQGYEPDDGPDRQLASNM-SLGVISKSQSAIDAS-------- 402

Query: 780 QMLISGV--GPSRIDIVTGWGRRSRVTGTSLVRQAVQELLHMFSFPFFTENGNSGCFVGC 837
              + G    P  I +VTG G  + V+    +R+ ++  L     PF      SG FV  
Sbjct: 403 ---LQGAPESPKSIVLVTGEGEYNMVS----LRKTIRAYLLEMGSPFLPCRSRSGRFVVK 455

Query: 838 GEPLNKWLLQS 848
              L  WL  S
Sbjct: 456 AYSLKMWLKDS 466



 Score =  147 bits (370), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 85/290 (29%), Positives = 146/290 (50%), Gaps = 1/290 (0%)

Query: 342 VALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRL 401
           VAL   + +R QAG + D  TY T++    +         + ++M+   C+P++ TYN +
Sbjct: 49  VALELLHEVR-QAGLRPDAITYNTLISACSQGSNLDDAVAVFEEMIASECRPDLWTYNAM 107

Query: 402 IHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGL 461
           +  +GR     EA  +FK++   G +PD VTY +L+   AK G ++    + +++  AG 
Sbjct: 108 VSVHGRCGKAQEAELMFKELVEKGFQPDAVTYNSLLYAFAKEGDVERVERVCEELVKAGF 167

Query: 462 SPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALK 521
             D  TY+ +I+  GK G L  A  L+ EM   GC P+ VTY +++    K      A K
Sbjct: 168 RKDGITYNTMIHMYGKMGRLDLALGLYDEMRAIGCTPDAVTYTVLVDSLGKMDRISEAGK 227

Query: 522 LYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWG 581
           +  +M +AG +P  VT+S ++      G  D+AE  F  M      PD   Y +++D++ 
Sbjct: 228 VLEEMADAGLKPTLVTFSALICAYAKSGRQDDAERTFDRMVESGVKPDRLAYLVMLDVFA 287

Query: 582 KAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGM 631
           ++   RK    Y AM++ G +P+      LL+A  +  +  +   ++Q M
Sbjct: 288 RSDETRKLMVLYRAMIKDGYKPDDGLYQVLLAALAKGNEHDEIEGVIQDM 337



 Score =  100 bits (250), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 56/190 (29%), Positives = 99/190 (52%), Gaps = 1/190 (0%)

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
           +AGF+ D  TY TM+ + G+  +      L D+M   GC P+ VTY  L+ S G+ + ++
Sbjct: 164 KAGFRKDGITYNTMIHMYGKMGRLDLALGLYDEMRAIGCTPDAVTYTVLVDSLGKMDRIS 223

Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
           EA  V ++M   G +P  VT+  LI  +AK+G  D A   + +M  +G+ PD   Y V++
Sbjct: 224 EAGKVLEEMADAGLKPTLVTFSALICAYAKSGRQDDAERTFDRMVESGVKPDRLAYLVML 283

Query: 473 NCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFE 532
           +   ++   +    L+  M+  G  P+   Y +++A  AK   +     + +DM+ A FE
Sbjct: 284 DVFARSDETRKLMVLYRAMIKDGYKPDDGLYQVLLAALAKGNEHDEIEGVIQDME-AVFE 342

Query: 533 PDKVTYSIVM 542
            + +  S ++
Sbjct: 343 MNPLVISSIL 352


>gi|449442579|ref|XP_004139059.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g01110-like [Cucumis sativus]
          Length = 749

 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 94/295 (31%), Positives = 154/295 (52%)

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
           Q G   +  TY T++  + R        ++ D+M R G  P++V+++ LI    R  +L 
Sbjct: 355 QLGLTPNAATYNTLLVEICRRDNILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLY 414

Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
           +AL  F++M+  G  PD V Y  LID   + G L  A+ M  +M A G   D  TY+  +
Sbjct: 415 QALMHFREMERSGIVPDNVIYTILIDGFCRNGALSDALKMRDEMLARGCFMDVVTYNTFL 474

Query: 473 NCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFE 532
           N L K      A  LF EMV +G +P+  T+  +I    K  N   AL L+  M     +
Sbjct: 475 NGLCKKKMFADADMLFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLK 534

Query: 533 PDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEW 592
           PDKVTY+ +++     G +  A+ ++ +M RK+ +PD   YG +++ +  +G + +A   
Sbjct: 535 PDKVTYNTLIDGFCKAGEMGRAKELWDDMIRKDIIPDHISYGTVLNGFCSSGLLPEALNL 594

Query: 593 YEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
            + ML+ G+RPN+ TCN+L+  + R G +  AY  L  M++ G+ P   +Y  L+
Sbjct: 595 CDQMLEKGIRPNLVTCNTLIKGYCRSGDMPKAYEYLSKMISNGIIPDSFSYNTLI 649



 Score =  153 bits (387), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 122/446 (27%), Positives = 213/446 (47%), Gaps = 48/446 (10%)

Query: 362 TYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQM 421
           TY  ++  L +  ++     +L +M++ G  PN  TYN L+    R + + EA ++F +M
Sbjct: 329 TYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYNTLLVEICRRDNILEAQEIFDEM 388

Query: 422 QVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHL 481
              G  PD V++ +LI + A+ G L  A+  +++M+ +G+ PD   Y+++I+   + G L
Sbjct: 389 SRRGVLPDLVSFSSLIGVLARNGHLYQALMHFREMERSGIVPDNVIYTILIDGFCRNGAL 448

Query: 482 QAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIV 541
             A ++  EM+ +GC  ++VTYN  +    K + +  A  L+ +M   G  PD  T++ +
Sbjct: 449 SDALKMRDEMLARGCFMDVVTYNTFLNGLCKKKMFADADMLFNEMVERGMVPDFYTFTTL 508

Query: 542 MEVLGHC--GYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQA 599
           +   G+C  G +D+A  +F  M R N  PD+  Y  L+D + KAG + +A E ++ M++ 
Sbjct: 509 IR--GYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLIDGFCKAGEMGRAKELWDDMIRK 566

Query: 600 GLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDM 659
            + P+  +  ++L+ F   G L +A +L   ML  G++P+L T   L+            
Sbjct: 567 DIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKGIRPNLVTCNTLIK----------- 615

Query: 660 GFCHELMAVSGH--PAHMFLLSMPSPG--PDGQNVRDHVGSFLEMMHSE------DRESK 709
           G+C      SG    A+ +L  M S G  PD  +    +  +L+  + E      +   K
Sbjct: 616 GYCR-----SGDMPKAYEYLSKMISNGIIPDSFSYNTLIDGYLKEANLEKAFILINEMEK 670

Query: 710 RGLVDAVVDF------LHKSGLKEEAGSVWEVAAQKNVYPDAVKEKGMSY-WLINLHVMS 762
           RGL   ++ +          G  +EA  V     +  + PD     G +Y  LIN HV  
Sbjct: 671 RGLQFNIITYNLILNGFCAEGKMQEAEQVLRKMIEIGINPD-----GATYSSLINGHVSQ 725

Query: 763 DGTAVIALSRTLAWFRKQMLISGVGP 788
           D        +    F  +ML  G+ P
Sbjct: 726 DNM------KEAFRFHDEMLQRGLVP 745



 Score =  136 bits (343), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 115/468 (24%), Positives = 200/468 (42%), Gaps = 52/468 (11%)

Query: 335 KQLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPN 394
           K+L++ + A   F  LRR+ G     +    ++G L R        ++  ++VR G + N
Sbjct: 201 KKLREGSEA---FQILRRK-GVSVSINACNKLLGGLVRTGWVDLAWEIYGEVVRGGIELN 256

Query: 395 VVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYK 454
           V T N ++++  +       +     M+  G   D VTY TLI+ + + G ++ A  +  
Sbjct: 257 VYTLNIMVNALCKDRKFENVMFFLSDMEGKGVFADIVTYNTLINAYCREGLVEEAFQLLN 316

Query: 455 KMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKAR 514
              + G+ P   TY+ I+  L K G    A  +  EM+  G  PN  TYN ++    +  
Sbjct: 317 SFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYNTLLVEICRRD 376

Query: 515 NYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYG 574
           N   A +++ +M   G  PD V++S ++ VL   G+L +A   F EM R   VPD  +Y 
Sbjct: 377 NILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQALMHFREMERSGIVPDNVIYT 436

Query: 575 LLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNL 634
           +L+D + + G +  A +  + ML  G   +V T N+ L+   +    +DA  L   M+  
Sbjct: 437 ILIDGFCRNGALSDALKMRDEMLARGCFMDVVTYNTFLNGLCKKKMFADADMLFNEMVER 496

Query: 635 GLKPSLQTYTLLLSCCTEARSPYDMGFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHV 694
           G+ P   T+T L+            G+C                       DG    D  
Sbjct: 497 GMVPDFYTFTTLIR-----------GYCK----------------------DGN--MDKA 521

Query: 695 GSFLEMMHSEDRESKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAVKEKGMSYW 754
            +  E M   + +  +   + ++D   K+G    A  +W+   +K++ PD +     SY 
Sbjct: 522 LNLFEAMVRTNLKPDKVTYNTLIDGFCKAGEMGRAKELWDDMIRKDIIPDHI-----SYG 576

Query: 755 LINLHVMSDGTAVIALSRTLAWFRKQMLISGVGPSRI---DIVTGWGR 799
            +     S G    AL+        QML  G+ P+ +    ++ G+ R
Sbjct: 577 TVLNGFCSSGLLPEALNLC-----DQMLEKGIRPNLVTCNTLIKGYCR 619



 Score =  135 bits (340), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 88/308 (28%), Positives = 156/308 (50%), Gaps = 5/308 (1%)

Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLI 402
           AL  F  + R +G   D   YT ++    R        K+ D+M+  GC  +VVTYN  +
Sbjct: 416 ALMHFREMER-SGIVPDNVIYTILIDGFCRNGALSDALKMRDEMLARGCFMDVVTYNTFL 474

Query: 403 HSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLS 462
           +   +     +A  +F +M   G  PD  T+ TLI  + K G +D A+++++ M    L 
Sbjct: 475 NGLCKKKMFADADMLFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLK 534

Query: 463 PDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKL 522
           PD  TY+ +I+   KAG +  A +L+ +M+ +  IP+ ++Y  ++     +     AL L
Sbjct: 535 PDKVTYNTLIDGFCKAGEMGRAKELWDDMIRKDIIPDHISYGTVLNGFCSSGLLPEALNL 594

Query: 523 YRDMQNAGFEPDKVTYSIVMEVLGHC--GYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLW 580
              M   G  P+ VT + +++  G+C  G + +A    ++M     +PD   Y  L+D +
Sbjct: 595 CDQMLEKGIRPNLVTCNTLIK--GYCRSGDMPKAYEYLSKMISNGIIPDSFSYNTLIDGY 652

Query: 581 GKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSL 640
            K  N+ KA+     M + GL+ N+ T N +L+ F   G++ +A  +L+ M+ +G+ P  
Sbjct: 653 LKEANLEKAFILINEMEKRGLQFNIITYNLILNGFCAEGKMQEAEQVLRKMIEIGINPDG 712

Query: 641 QTYTLLLS 648
            TY+ L++
Sbjct: 713 ATYSSLIN 720



 Score =  125 bits (314), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 101/383 (26%), Positives = 180/383 (46%), Gaps = 33/383 (8%)

Query: 269 ERFSKPSREMKIPAGLAPFSRH---FASTGNVVESVSRILRQWKWGPLAEEALGNTNYSM 325
           E F + SR   +P  L  FS      A  G++ +++       + G + +    N  Y++
Sbjct: 383 EIFDEMSRRGVLP-DLVSFSSLIGVLARNGHLYQALMHFREMERSGIVPD----NVIYTI 437

Query: 326 --DAYQANQVLK---QLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAIN 380
             D +  N  L    +++D  +A G F           D  TY T +  L + + F   +
Sbjct: 438 LIDGFCRNGALSDALKMRDEMLARGCF----------MDVVTYNTFLNGLCKKKMFADAD 487

Query: 381 KLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIH 440
            L ++MV  G  P+  T+  LI  Y +   +++AL++F+ M     +PD+VTY TLID  
Sbjct: 488 MLFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLIDGF 547

Query: 441 AKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNL 500
            KAG +  A +++  M    + PD  +Y  ++N    +G L  A  L  +M+ +G  PNL
Sbjct: 548 CKAGEMGRAKELWDDMIRKDIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKGIRPNL 607

Query: 501 VTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEA--EAVF 558
           VT N +I    ++ +   A +    M + G  PD  +Y+ +++     GYL EA  E  F
Sbjct: 608 VTCNTLIKGYCRSGDMPKAYEYLSKMISNGIIPDSFSYNTLID-----GYLKEANLEKAF 662

Query: 559 A---EMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAF 615
               EM ++    +   Y L+++ +   G +++A +    M++ G+ P+  T +SL++  
Sbjct: 663 ILINEMEKRGLQFNIITYNLILNGFCAEGKMQEAEQVLRKMIEIGINPDGATYSSLINGH 722

Query: 616 LRVGQLSDAYHLLQGMLNLGLKP 638
           +    + +A+     ML  GL P
Sbjct: 723 VSQDNMKEAFRFHDEMLQRGLVP 745



 Score =  117 bits (292), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 71/255 (27%), Positives = 133/255 (52%), Gaps = 6/255 (2%)

Query: 353 QAGFKHDEHTYTTMV-GILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           + G   D +T+TT++ G         A+N L + MVR   +P+ VTYN LI  + +A  +
Sbjct: 495 ERGMVPDFYTFTTLIRGYCKDGNMDKALN-LFEAMVRTNLKPDKVTYNTLIDGFCKAGEM 553

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
             A +++  M      PD ++Y T+++    +G L  A+++  +M   G+ P+  T + +
Sbjct: 554 GRAKELWDDMIRKDIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKGIRPNLVTCNTL 613

Query: 472 INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF 531
           I    ++G +  A++   +M++ G IP+  +YN +I    K  N + A  L  +M+  G 
Sbjct: 614 IKGYCRSGDMPKAYEYLSKMISNGIIPDSFSYNTLIDGYLKEANLEKAFILINEMEKRGL 673

Query: 532 EPDKVTYSIVMEVLGHC--GYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKA 589
           + + +TY++++   G C  G + EAE V  +M      PD   Y  L++      N+++A
Sbjct: 674 QFNIITYNLILN--GFCAEGKMQEAEQVLRKMIEIGINPDGATYSSLINGHVSQDNMKEA 731

Query: 590 WEWYEAMLQAGLRPN 604
           + +++ MLQ GL P+
Sbjct: 732 FRFHDEMLQRGLVPD 746


>gi|225457536|ref|XP_002272226.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
           mitochondrial [Vitis vinifera]
 gi|297745544|emb|CBI40709.3| unnamed protein product [Vitis vinifera]
          Length = 695

 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 93/318 (29%), Positives = 158/318 (49%)

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
           ++GF  DEHTY+ ++     A ++ +   +L +M   G +PN   ++R++ SY       
Sbjct: 354 RSGFSPDEHTYSLLIDAYANAGRWESARIVLKEMEASGVRPNSYVFSRILASYRDRGKWQ 413

Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
           ++  V ++M+  G  PDR  Y  +ID   K   LD A+  + +M+  G+ PD  T++ +I
Sbjct: 414 KSFQVLREMRNSGVSPDRHFYNVMIDTFGKCNCLDHALATFDRMRMEGVQPDAVTWNTLI 473

Query: 473 NCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFE 532
           +C  K+GH   A +LF  M   GC P   TYNIMI    +   ++    L   MQ+ G  
Sbjct: 474 DCHCKSGHHNKAEELFEAMQESGCSPCTTTYNIMINSFGEQERWEDVKTLLGKMQSQGLL 533

Query: 533 PDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEW 592
            + VTY+ ++++ G  G   +A      M+     P   +Y  L++ + + G   +A   
Sbjct: 534 ANVVTYTTLVDIYGQSGRFKDAIECLEVMKSVGLKPSSTMYNALINAYAQRGLSEQAINA 593

Query: 593 YEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTE 652
           +  M   GL+P+V   NSL++AF    + ++A+ +LQ M    LKP + TYT L+     
Sbjct: 594 FRVMRADGLKPSVLVLNSLINAFGEDRRDAEAFSVLQYMKENDLKPDVVTYTTLMKALIR 653

Query: 653 ARSPYDMGFCHELMAVSG 670
                 +   +E M +SG
Sbjct: 654 VEKFDKVPAVYEEMTLSG 671



 Score =  145 bits (367), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 108/425 (25%), Positives = 198/425 (46%), Gaps = 14/425 (3%)

Query: 369 ILGRARQFGAINKLLD--QMVR-DGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVG 425
           I+G A+  G +N+ +    MV+ +G  P   T   +I + G A    EA  +F++++  G
Sbjct: 263 IVGFAKS-GDVNRAMSFLAMVQGNGLSPKTATLVAVITALGNAGRTEEAEAIFEELKEGG 321

Query: 426 CEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAH 485
             P    Y  L+  + K G L  A  +  +M+ +G SPD  TYS++I+    AG  ++A 
Sbjct: 322 LMPRTRAYNALLKGYVKTGSLKDAESIVSEMERSGFSPDEHTYSLLIDAYANAGRWESAR 381

Query: 486 QLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVL 545
            +  EM   G  PN   ++ ++A       +Q + ++ R+M+N+G  PD+  Y+++++  
Sbjct: 382 IVLKEMEASGVRPNSYVFSRILASYRDRGKWQKSFQVLREMRNSGVSPDRHFYNVMIDTF 441

Query: 546 GHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNV 605
           G C  LD A A F  MR +   PD   +  L+D   K+G+  KA E +EAM ++G  P  
Sbjct: 442 GKCNCLDHALATFDRMRMEGVQPDAVTWNTLIDCHCKSGHHNKAEELFEAMQESGCSPCT 501

Query: 606 PTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGFCHEL 665
            T N ++++F    +  D   LL  M + GL  ++ TYT L+    ++    D   C E+
Sbjct: 502 TTYNIMINSFGEQERWEDVKTLLGKMQSQGLLANVVTYTTLVDIYGQSGRFKDAIECLEV 561

Query: 666 MAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRESKRGLVDAVVDFLHKSGL 725
           M   G      + +        + + +   +   +M ++  +    +++++++   +   
Sbjct: 562 MKSVGLKPSSTMYNALINAYAQRGLSEQAINAFRVMRADGLKPSVLVLNSLINAFGEDRR 621

Query: 726 KEEAGSVWEVAAQKNVYPDAVKEKGMSYWLINLHVMSDGTAVIALSRTLAWFRKQMLISG 785
             EA SV +   + ++ PD V    +   LI +       AV           ++M +SG
Sbjct: 622 DAEAFSVLQYMKENDLKPDVVTYTTLMKALIRVEKFDKVPAVY----------EEMTLSG 671

Query: 786 VGPSR 790
             P R
Sbjct: 672 CTPDR 676



 Score =  124 bits (310), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 101/424 (23%), Positives = 180/424 (42%), Gaps = 41/424 (9%)

Query: 362 TYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEAL--DVFK 419
           TY  ++G   R         L+ +M RDG   + V Y+ +I S  R N  + ++   ++ 
Sbjct: 186 TYNALIGACARNDDLEKALNLMSRMRRDGFPSDFVNYSFIIQSLTRTNKSDSSMLQKIYA 245

Query: 420 QMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAG 479
           +++    E D      +I   AK+G ++ AM     +Q  GLSP T T   +I  LG AG
Sbjct: 246 EIESDKIELDGQLLNDIIVGFAKSGDVNRAMSFLAMVQGNGLSPKTATLVAVITALGNAG 305

Query: 480 HLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYS 539
             + A  +F E+   G +P    YN ++    K  + + A  +  +M+ +GF PD+ TYS
Sbjct: 306 RTEEAEAIFEELKEGGLMPRTRAYNALLKGYVKTGSLKDAESIVSEMERSGFSPDEHTYS 365

Query: 540 IVMEVLGHCG-------YLDEAEA----------------------------VFAEMRRK 564
           ++++   + G        L E EA                            V  EMR  
Sbjct: 366 LLIDAYANAGRWESARIVLKEMEASGVRPNSYVFSRILASYRDRGKWQKSFQVLREMRNS 425

Query: 565 NWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDA 624
              PD   Y +++D +GK   +  A   ++ M   G++P+  T N+L+    + G  + A
Sbjct: 426 GVSPDRHFYNVMIDTFGKCNCLDHALATFDRMRMEGVQPDAVTWNTLIDCHCKSGHHNKA 485

Query: 625 YHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGFCHELMAVSGHPAHM--FLLSMPS 682
             L + M   G  P   TY ++++   E     D+      M   G  A++  +   +  
Sbjct: 486 EELFEAMQESGCSPCTTTYNIMINSFGEQERWEDVKTLLGKMQSQGLLANVVTYTTLVDI 545

Query: 683 PGPDGQNVRDHVGSFLEMMHSEDRESKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVY 742
            G  G+  +D +   LE+M S   +    + +A+++   + GL E+A + + V     + 
Sbjct: 546 YGQSGR-FKDAI-ECLEVMKSVGLKPSSTMYNALINAYAQRGLSEQAINAFRVMRADGLK 603

Query: 743 PDAV 746
           P  +
Sbjct: 604 PSVL 607



 Score =  110 bits (274), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 74/307 (24%), Positives = 131/307 (42%), Gaps = 37/307 (12%)

Query: 307 QWKWGPLAEEALGNTNYSMDAYQANQVLKQLQDHTVALGFFNWLR--RQAGFKHDEHTYT 364
           +W+   +  + +  +    ++Y  +++L   +D       F  LR  R +G   D H Y 
Sbjct: 376 RWESARIVLKEMEASGVRPNSYVFSRILASYRDRGKWQKSFQVLREMRNSGVSPDRHFYN 435

Query: 365 TMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVV 424
            M+   G+           D+M  +G QP+ VT+N LI  + ++ + N+A ++F+ MQ  
Sbjct: 436 VMIDTFGKCNCLDHALATFDRMRMEGVQPDAVTWNTLIDCHCKSGHHNKAEELFEAMQES 495

Query: 425 GCEP-----------------------------------DRVTYCTLIDIHAKAGFLDVA 449
           GC P                                   + VTY TL+DI+ ++G    A
Sbjct: 496 GCSPCTTTYNIMINSFGEQERWEDVKTLLGKMQSQGLLANVVTYTTLVDIYGQSGRFKDA 555

Query: 450 MDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIAL 509
           ++  + M++ GL P +  Y+ +IN   + G  + A   F  M   G  P+++  N +I  
Sbjct: 556 IECLEVMKSVGLKPSSTMYNALINAYAQRGLSEQAINAFRVMRADGLKPSVLVLNSLINA 615

Query: 510 QAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPD 569
             + R    A  + + M+    +PD VTY+ +M+ L      D+  AV+ EM      PD
Sbjct: 616 FGEDRRDAEAFSVLQYMKENDLKPDVVTYTTLMKALIRVEKFDKVPAVYEEMTLSGCTPD 675

Query: 570 EPVYGLL 576
                +L
Sbjct: 676 RKARAML 682



 Score = 91.3 bits (225), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 47/186 (25%), Positives = 88/186 (47%)

Query: 362 TYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQM 421
           TY  M+   G   ++  +  LL +M   G   NVVTY  L+  YG++    +A++  + M
Sbjct: 503 TYNIMINSFGEQERWEDVKTLLGKMQSQGLLANVVTYTTLVDIYGQSGRFKDAIECLEVM 562

Query: 422 QVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHL 481
           + VG +P    Y  LI+ +A+ G  + A++ ++ M+A GL P     + +IN  G+    
Sbjct: 563 KSVGLKPSSTMYNALINAYAQRGLSEQAINAFRVMRADGLKPSVLVLNSLINAFGEDRRD 622

Query: 482 QAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIV 541
             A  +   M      P++VTY  ++    +   +     +Y +M  +G  PD+   +++
Sbjct: 623 AEAFSVLQYMKENDLKPDVVTYTTLMKALIRVEKFDKVPAVYEEMTLSGCTPDRKARAML 682

Query: 542 MEVLGH 547
              L +
Sbjct: 683 RSALRY 688



 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 67/316 (21%), Positives = 121/316 (38%), Gaps = 42/316 (13%)

Query: 468 YSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQ 527
           YS++I+ LG++  L   ++ F     Q   P  +TYN +I   A+  + + AL L   M+
Sbjct: 157 YSILIHALGRSEKL---YEAFLLSQRQTLTP--LTYNALIGACARNDDLEKALNLMSRMR 211

Query: 528 NAGFEPDKVTYSIVMEVLGHCGYLDEA--EAVFAEMRRKNWVPDEPVYGLLVDLWGKAGN 585
             GF  D V YS +++ L      D +  + ++AE+       D  +   ++  + K+G+
Sbjct: 212 RDGFPSDFVNYSFIIQSLTRTNKSDSSMLQKIYAEIESDKIELDGQLLNDIIVGFAKSGD 271

Query: 586 VRKAWEW-----------------------------------YEAMLQAGLRPNVPTCNS 610
           V +A  +                                   +E + + GL P     N+
Sbjct: 272 VNRAMSFLAMVQGNGLSPKTATLVAVITALGNAGRTEEAEAIFEELKEGGLMPRTRAYNA 331

Query: 611 LLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGFCHELMAVSG 670
           LL  +++ G L DA  ++  M   G  P   TY+LL+     A          + M  SG
Sbjct: 332 LLKGYVKTGSLKDAESIVSEMERSGFSPDEHTYSLLIDAYANAGRWESARIVLKEMEASG 391

Query: 671 HPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRESKRGLVDAVVDFLHKSGLKEEAG 730
              + ++ S        +         L  M +      R   + ++D   K    + A 
Sbjct: 392 VRPNSYVFSRILASYRDRGKWQKSFQVLREMRNSGVSPDRHFYNVMIDTFGKCNCLDHAL 451

Query: 731 SVWEVAAQKNVYPDAV 746
           + ++    + V PDAV
Sbjct: 452 ATFDRMRMEGVQPDAV 467


>gi|302787647|ref|XP_002975593.1| hypothetical protein SELMODRAFT_103638 [Selaginella moellendorffii]
 gi|300156594|gb|EFJ23222.1| hypothetical protein SELMODRAFT_103638 [Selaginella moellendorffii]
          Length = 471

 Score =  167 bits (422), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 116/439 (26%), Positives = 199/439 (45%), Gaps = 14/439 (3%)

Query: 381 KLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIH 440
           KL +QM+ +G  P+ + YN LI  Y +   ++EA  ++++M  VG EP   TY +L++  
Sbjct: 29  KLFEQMLDNGISPDGIEYNILIDGYAKKGRVDEANRLYEEMVSVGLEPSIYTYNSLLNAF 88

Query: 441 AKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHL-QAAHQLFCEMVNQGCIPN 499
            K   +  AM+++K M   G  PD  TYS II+ L K G + +A   LF +M+ +GC  N
Sbjct: 89  CKETKMKEAMELFKTMAEKGFEPDVVTYSTIISGLCKTGKVTEALEMLFHKMIERGCSAN 148

Query: 500 LVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFA 559
            V YN +I    K  N + A KL  +M + G+ PD +TY+ ++  L   G + EA+  F 
Sbjct: 149 TVAYNALINGLCKDENIERAYKLLEEMASKGYVPDNITYNTILSGLCRMGKVSEAKQFFD 208

Query: 560 EMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVG 619
            M  + + PD   Y  L+D   K G   +A + ++ ++  G  P+  T NS+L    R  
Sbjct: 209 SMPSRGYSPDVVAYNGLLDALYKEGKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKS 268

Query: 620 QLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGFCHELMAVSGHPAHMFLLS 679
            + +A  + + M+  G  P+  TY+++LS    A+   D     E M+  G    +   +
Sbjct: 269 NMDEAEEMFKKMVASGCAPNGATYSIVLSGHCRAKKVDDAHKVLEEMSKIGAVPDVVTYN 328

Query: 680 MPSPGPDGQNVRDHVGSFLEMMHSEDRESKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQK 739
           +   G    N+ D        M              V++ L K+    +A  +++   ++
Sbjct: 329 ILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVSYSVVLNGLCKTNKVHDARVLFDRMIER 388

Query: 740 NVYPDAVKEKGMSYWLINLHVMSDGTAVIALSRTLAWFRKQMLISGVGPSRI---DIVTG 796
            + PD V            +++ DG               QM  SG  P  +    ++ G
Sbjct: 389 KLVPDVV----------TFNILMDGLCKAGKLDEAKDLLDQMTCSGCAPDYVAYNTLMNG 438

Query: 797 WGRRSRVTGTSLVRQAVQE 815
             ++ R      + QA++E
Sbjct: 439 LRKQGRHIQADRLTQAMKE 457



 Score =  159 bits (401), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 88/294 (29%), Positives = 161/294 (54%), Gaps = 1/294 (0%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           G   D   Y  ++    +  +    N+L ++MV  G +P++ TYN L++++ +   + EA
Sbjct: 38  GISPDGIEYNILIDGYAKKGRVDEANRLYEEMVSVGLEPSIYTYNSLLNAFCKETKMKEA 97

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDM-YKKMQAAGLSPDTFTYSVIIN 473
           +++FK M   G EPD VTY T+I    K G +  A++M + KM   G S +T  Y+ +IN
Sbjct: 98  MELFKTMAEKGFEPDVVTYSTIISGLCKTGKVTEALEMLFHKMIERGCSANTVAYNALIN 157

Query: 474 CLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEP 533
            L K  +++ A++L  EM ++G +P+ +TYN +++   +      A + +  M + G+ P
Sbjct: 158 GLCKDENIERAYKLLEEMASKGYVPDNITYNTILSGLCRMGKVSEAKQFFDSMPSRGYSP 217

Query: 534 DKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWY 593
           D V Y+ +++ L   G  DEA  +F ++  K ++PD   Y  ++    +  N+ +A E +
Sbjct: 218 DVVAYNGLLDALYKEGKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDEAEEMF 277

Query: 594 EAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
           + M+ +G  PN  T + +LS   R  ++ DA+ +L+ M  +G  P + TY +LL
Sbjct: 278 KKMVASGCAPNGATYSIVLSGHCRAKKVDDAHKVLEEMSKIGAVPDVVTYNILL 331



 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 88/298 (29%), Positives = 153/298 (51%), Gaps = 5/298 (1%)

Query: 353 QAGFKHDEHTYTTMV-GILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           + GF+ D  TY+T++ G+    +   A+  L  +M+  GC  N V YN LI+   +   +
Sbjct: 106 EKGFEPDVVTYSTIISGLCKTGKVTEALEMLFHKMIERGCSANTVAYNALINGLCKDENI 165

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
             A  + ++M   G  PD +TY T++    + G +  A   +  M + G SPD   Y+ +
Sbjct: 166 ERAYKLLEEMASKGYVPDNITYNTILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGL 225

Query: 472 INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF 531
           ++ L K G    A +LF +++ +G +P+ VTYN ++   A+  N   A ++++ M  +G 
Sbjct: 226 LDALYKEGKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDEAEEMFKKMVASGC 285

Query: 532 EPDKVTYSIVMEVLGHC--GYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKA 589
            P+  TYSIV+   GHC    +D+A  V  EM +   VPD   Y +L+D   K   V KA
Sbjct: 286 APNGATYSIVLS--GHCRAKKVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKA 343

Query: 590 WEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
            E +  M+  G  P++ + + +L+   +  ++ DA  L   M+   L P + T+ +L+
Sbjct: 344 HELFSTMVDNGCAPDIVSYSVVLNGLCKTNKVHDARVLFDRMIERKLVPDVVTFNILM 401



 Score =  149 bits (377), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 88/286 (30%), Positives = 142/286 (49%)

Query: 363 YTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQ 422
           Y  ++  L +        KLL++M   G  P+ +TYN ++    R   ++EA   F  M 
Sbjct: 152 YNALINGLCKDENIERAYKLLEEMASKGYVPDNITYNTILSGLCRMGKVSEAKQFFDSMP 211

Query: 423 VVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQ 482
             G  PD V Y  L+D   K G  D AM ++K + A G  PDT TY+ I+  L +  ++ 
Sbjct: 212 SRGYSPDVVAYNGLLDALYKEGKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMD 271

Query: 483 AAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVM 542
            A ++F +MV  GC PN  TY+I+++   +A+    A K+  +M   G  PD VTY+I++
Sbjct: 272 EAEEMFKKMVASGCAPNGATYSIVLSGHCRAKKVDDAHKVLEEMSKIGAVPDVVTYNILL 331

Query: 543 EVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLR 602
           + L     +D+A  +F+ M      PD   Y ++++   K   V  A   ++ M++  L 
Sbjct: 332 DGLCKTNLVDKAHELFSTMVDNGCAPDIVSYSVVLNGLCKTNKVHDARVLFDRMIERKLV 391

Query: 603 PNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
           P+V T N L+    + G+L +A  LL  M   G  P    Y  L++
Sbjct: 392 PDVVTFNILMDGLCKAGKLDEAKDLLDQMTCSGCAPDYVAYNTLMN 437



 Score =  143 bits (361), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 86/282 (30%), Positives = 146/282 (51%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           G+  D  TY T++  L R  +     +  D M   G  P+VV YN L+ +  +    +EA
Sbjct: 179 GYVPDNITYNTILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKTDEA 238

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
           + +FK +   G  PD VTY +++   A+   +D A +M+KKM A+G +P+  TYS++++ 
Sbjct: 239 MKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDEAEEMFKKMVASGCAPNGATYSIVLSG 298

Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPD 534
             +A  +  AH++  EM   G +P++VTYNI++    K      A +L+  M + G  PD
Sbjct: 299 HCRAKKVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPD 358

Query: 535 KVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYE 594
            V+YS+V+  L     + +A  +F  M  +  VPD   + +L+D   KAG + +A +  +
Sbjct: 359 IVSYSVVLNGLCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEAKDLLD 418

Query: 595 AMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGL 636
            M  +G  P+    N+L++   + G+   A  L Q M   G 
Sbjct: 419 QMTCSGCAPDYVAYNTLMNGLRKQGRHIQADRLTQAMKEKGF 460



 Score =  124 bits (311), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 69/223 (30%), Positives = 118/223 (52%), Gaps = 1/223 (0%)

Query: 426 CEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAH 485
           C P+R T+  ++    K G L     ++++M   G+SPD   Y+++I+   K G +  A+
Sbjct: 4   CSPNRYTFRVVLKSFCKQGKLRDGYKLFEQMLDNGISPDGIEYNILIDGYAKKGRVDEAN 63

Query: 486 QLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVL 545
           +L+ EMV+ G  P++ TYN ++    K    + A++L++ M   GFEPD VTYS ++  L
Sbjct: 64  RLYEEMVSVGLEPSIYTYNSLLNAFCKETKMKEAMELFKTMAEKGFEPDVVTYSTIISGL 123

Query: 546 GHCGYLDEA-EAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPN 604
              G + EA E +F +M  +    +   Y  L++   K  N+ +A++  E M   G  P+
Sbjct: 124 CKTGKVTEALEMLFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYVPD 183

Query: 605 VPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
             T N++LS   R+G++S+A      M + G  P +  Y  LL
Sbjct: 184 NITYNTILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLL 226



 Score =  115 bits (288), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 66/215 (30%), Positives = 110/215 (51%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           G+  D  TY +++  L R        ++  +MV  GC PN  TY+ ++  + RA  +++A
Sbjct: 249 GYMPDTVTYNSILLGLARKSNMDEAEEMFKKMVASGCAPNGATYSIVLSGHCRAKKVDDA 308

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
             V ++M  +G  PD VTY  L+D   K   +D A +++  M   G +PD  +YSV++N 
Sbjct: 309 HKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVSYSVVLNG 368

Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPD 534
           L K   +  A  LF  M+ +  +P++VT+NI++    KA     A  L   M  +G  PD
Sbjct: 369 LCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEAKDLLDQMTCSGCAPD 428

Query: 535 KVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPD 569
            V Y+ +M  L   G   +A+ +   M+ K ++ D
Sbjct: 429 YVAYNTLMNGLRKQGRHIQADRLTQAMKEKGFLSD 463



 Score = 55.1 bits (131), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 35/112 (31%), Positives = 54/112 (48%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           G   D  +Y+ ++  L +  +      L D+M+     P+VVT+N L+    +A  L+EA
Sbjct: 354 GCAPDIVSYSVVLNGLCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEA 413

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTF 466
            D+  QM   GC PD V Y TL++   K G    A  + + M+  G   D F
Sbjct: 414 KDLLDQMTCSGCAPDYVAYNTLMNGLRKQGRHIQADRLTQAMKEKGFLSDCF 465


>gi|356510655|ref|XP_003524052.1| PREDICTED: pentatricopeptide repeat-containing protein At5g46580,
           chloroplastic-like [Glycine max]
          Length = 712

 Score =  167 bits (422), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 125/536 (23%), Positives = 230/536 (42%), Gaps = 43/536 (8%)

Query: 346 FFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSY 405
           F NW+R Q     +   Y   +  L   +QFG I  L  QM+ +G   + +TY+ +I   
Sbjct: 175 FLNWIRTQNLLPMETIFYNVTMKSLRFGKQFGLIEDLAHQMIDNGVPLDNITYSTIISCA 234

Query: 406 GRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDT 465
            + N  ++A+  F++M   G  PD VTY  ++D++A+ G ++  + +Y++ +A G  PD 
Sbjct: 235 KKCNLYDKAVHWFERMYKTGLMPDEVTYSAILDVYARLGKVEEVISLYERGRATGWKPDP 294

Query: 466 FTYSVI-----------------------------------INCLGKAGHLQAAHQLFCE 490
            T+SV+                                   +  +GKAG    A  LF E
Sbjct: 295 ITFSVLGKMFGEAGDYDGIRYVFQEMESVGVQPNLVVYNTLLEAMGKAGKPGFARGLFEE 354

Query: 491 MVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGY 550
           M+  G +PN  T   +I +  KAR  + AL+L++ M+  G+  D + Y+ ++ +    G 
Sbjct: 355 MIESGIVPNEKTLTAVIKIYGKARWSRDALELWQRMKENGWPMDFILYNTLLNMCADVGL 414

Query: 551 LDEAEAVFAEMRRK-NWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCN 609
           ++EAE +F +M++  +  PD   Y  +++++G  G+V KA + ++ M + G+  NV    
Sbjct: 415 VEEAETLFRDMKQSVHCKPDSWSYTAMLNIYGSQGDVDKAMKLFDEMCKLGVELNVMGFT 474

Query: 610 SLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGFCHELMAVS 669
            L+    R  +  D   +    +  G+KP  +    LLS  + ++   D       +  +
Sbjct: 475 CLIQCLGRAMEFDDLVRVFDISVERGIKPDDRLCGCLLSVVSLSQGSNDEEKVLACLQQA 534

Query: 670 GHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRESKRGLVDAVVDFLHKSGLKEEA 729
                 F+  +       + V++    F  +M +   E +R   + ++D      L E A
Sbjct: 535 NPKLVAFIHLIEDEKTSFETVKEE---FKGIMSNAAVEVRRPFCNCLIDICRNKDLLERA 591

Query: 730 GSVWEVAAQKNVYPDAVKEKGMSYWLINLHVMSDGTAVIALSRTLAWFRKQMLISGVGPS 789
             +  +     +YP  +  K +  W +++  +S G A+ AL   +    K +      P 
Sbjct: 592 HELLYLGTLYGLYP-GLHNKTVEEWCLDVRSLSVGAALTALEEWMWTLTKIVKREETLPE 650

Query: 790 RIDIVTGWGRRSRVTGTSLVRQAVQELLHMFSFPFFTENGNSGCFVGCGEPLNKWL 845
                TG G      G ++   +    L   + PF       GCF+   E L  W+
Sbjct: 651 LFLAQTGTGAHKFAQGLNI---SFASHLRKLAAPFKQSEEKVGCFIASREDLVSWV 703



 Score = 94.7 bits (234), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 87/370 (23%), Positives = 160/370 (43%), Gaps = 22/370 (5%)

Query: 291 FASTGNVVESVSRILRQ----WKWGPLAEEALGNTNYSMDAYQANQVLKQLQDHTVALGF 346
           +A  G V E +S   R     WK  P+    LG        Y   + + Q  +       
Sbjct: 269 YARLGKVEEVISLYERGRATGWKPDPITFSVLGKMFGEAGDYDGIRYVFQEME------- 321

Query: 347 FNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYG 406
                   G + +   Y T++  +G+A + G    L ++M+  G  PN  T   +I  YG
Sbjct: 322 ------SVGVQPNLVVYNTLLEAMGKAGKPGFARGLFEEMIESGIVPNEKTLTAVIKIYG 375

Query: 407 RANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKM-QAAGLSPDT 465
           +A +  +AL+++++M+  G   D + Y TL+++ A  G ++ A  +++ M Q+    PD+
Sbjct: 376 KARWSRDALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSVHCKPDS 435

Query: 466 FTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRD 525
           ++Y+ ++N  G  G +  A +LF EM   G   N++ +  +I    +A  +   ++++  
Sbjct: 436 WSYTAMLNIYGSQGDVDKAMKLFDEMCKLGVELNVMGFTCLIQCLGRAMEFDDLVRVFDI 495

Query: 526 MQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGN 585
               G +PD      ++ V+      ++ E V A +++ N  P    +  L++    +  
Sbjct: 496 SVERGIKPDDRLCGCLLSVVSLSQGSNDEEKVLACLQQAN--PKLVAFIHLIEDEKTSFE 553

Query: 586 VRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTL 645
             K  E+   M  A +    P CN L+        L  A+ LL      GL P L   T 
Sbjct: 554 TVKE-EFKGIMSNAAVEVRRPFCNCLIDICRNKDLLERAHELLYLGTLYGLYPGLHNKT- 611

Query: 646 LLSCCTEARS 655
           +   C + RS
Sbjct: 612 VEEWCLDVRS 621


>gi|294461967|gb|ADE76539.1| unknown [Picea sitchensis]
          Length = 486

 Score =  167 bits (422), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 96/327 (29%), Positives = 167/327 (51%), Gaps = 1/327 (0%)

Query: 329 QANQVLKQLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVR 388
           + ++++    D  +A+  F    RQ GFKH   TY T++  LGRARQF  +  L+ QM +
Sbjct: 102 RVHKLIASQTDALLAMEIFEVASRQPGFKHSYSTYHTLICKLGRARQFKTMEGLIQQMRK 161

Query: 389 DGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDV 448
           DGC      +  +I  YG     NEA+  F QM   G EP    +  L+ +  +   L+ 
Sbjct: 162 DGCPYTPGLFVDIIEIYGEVGMPNEAIKAFHQMLEFGYEPLAKHFNVLLIVLIEHKCLET 221

Query: 449 AMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIA 508
           A+ ++KK+   G+SP+T TY+++I     +  L  A+ LF +M  QGCIP++ TY+I++ 
Sbjct: 222 ALSLFKKLHEFGISPNTRTYNILIRAHCHSDKLSHAYFLFNKMHKQGCIPDVETYSILMQ 281

Query: 509 LQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVP 568
              +    ++AL +  +M N G+ PD +TY+ ++  L     L EA  + ++M+     P
Sbjct: 282 GLCRKSQVKTALGVLDEMLNKGYVPDALTYNTLLNSLCRKMNLREAYRLLSKMKVMGCNP 341

Query: 569 DEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLL 628
           D   Y  ++  + + G    A +    M + G  PN  +  +L++     G+  +A   +
Sbjct: 342 DVINYNTVITGFCREGRALDACQILRDMPENGCLPNALSYRTLVNGLCNEGKFDEAKDFV 401

Query: 629 QGMLNLGLKPSLQTYTLLLS-CCTEAR 654
           + M++ G  P +  Y LL++  C E +
Sbjct: 402 EEMISNGFIPHISIYHLLITGLCNEGK 428


>gi|224089803|ref|XP_002308816.1| predicted protein [Populus trichocarpa]
 gi|222854792|gb|EEE92339.1| predicted protein [Populus trichocarpa]
          Length = 700

 Score =  167 bits (422), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 154/674 (22%), Positives = 288/674 (42%), Gaps = 61/674 (9%)

Query: 208 RFKRVSNASNGTSLETHNVSSDNSDRRRIVQPRSKAHSNRLNSNFKSNLQPSDAKV--VE 265
           +   +S+ S  TSL+  NVS  + +  R  Q  SK      +SNFK     S      V 
Sbjct: 41  KINTLSSQSRATSLQITNVSLQDEELPR--QETSK------DSNFKEKTGSSSKSYIWVN 92

Query: 266 CVSERFS---KPSREMKIPAGLAPFSRHFASTGNVVESVSRILRQWKWGPLAEEALGNTN 322
             S R S   K S + K  + L   +++  S     + V  +L ++    L ++A+    
Sbjct: 93  PKSSRASILRKSSYDAKYTS-LVNAAKYLNSCSPNKDDVFNVLSKFDGKLLEQDAV---- 147

Query: 323 YSMDAYQANQVLKQLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKL 382
                     +L  + +   AL    + + +  F  +   Y   + +  + R      KL
Sbjct: 148 ---------VILNNMSNPDTALLALKFFQERLKFNREVVVYNVTLKVFRKGRDLDKAEKL 198

Query: 383 LDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAK 442
            D+M+  G +P+  T++ +I      N  ++A++ F++M   G EPD VT  T+ID + +
Sbjct: 199 FDEMLERGVKPDNFTFSTIISCARLCNLADKAVEWFEKMPSFGLEPDDVTLSTMIDSYGR 258

Query: 443 AGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVT 502
           AG ++ A+ +Y + +      D   +S +I     AG+      ++ EM   G  PNLV 
Sbjct: 259 AGNVEKALSLYDRARTGEWRLDATAFSTLIRIYKVAGNFDGCLNVYEEMKALGVKPNLVI 318

Query: 503 YNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMR 562
           YNI++    +A+      K Y+D+ + G  P  VTY+ ++   G   Y ++A  ++ EM+
Sbjct: 319 YNILLDAMGRAKRPWQVKKFYQDIIDNGLSPSFVTYAALLHAYGRARYGEDAFKIYREMK 378

Query: 563 RKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLS 622
            K    +  +Y  ++ +    G+V KA E +E M  +G++P+  T +S+++ F   G++S
Sbjct: 379 EKGLGLNVVLYNSILAMCADLGHVDKAVEIFEDMKSSGIKPDSWTFSSMITIFSCCGKVS 438

Query: 623 DAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYD-MGFCHELMAVSGHPAHMF---LL 678
           +A + L  M   G +P++   T L+ C  +A+   D +   + +  +   P   F   LL
Sbjct: 439 EAENTLNEMFEAGFQPNIFILTSLIQCYGKAQRIDDVVNTFNRIFELVITPDDRFCGCLL 498

Query: 679 SMPSPGPDGQ-----------------------NVRDHVGSF----LEMMHSEDRESKRG 711
           ++ +  P+ +                         +D  G+F     ++  S   E K+ 
Sbjct: 499 NVMTQTPNEELSKLVKCAERANPKLGYVVKLLVEEQDSEGNFKNEATDLFDSISTEVKKA 558

Query: 712 LVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAVKEKGMSYWLINLHVMSDGTAVIALS 771
             + ++D   K  + E A  + ++     +Y + +  +  + W +NL  +S G A+ AL 
Sbjct: 559 YCNCLIDLCIKLNMLERACELLDLGLTLEIYTN-IMSRTSTQWSLNLKSLSPGAAMTALH 617

Query: 772 RTLAWFRKQMLISGVGPSRIDIVTGWGRRSRVTGTSLVRQAVQELLHMFSFPFFTENGNS 831
             +    K +      P  + I TG G+  + +   L     +  L   + PF       
Sbjct: 618 IWMNDLSKVLEAGEQLPPLLGINTGHGKH-KYSEKGLA-NVFESYLKELNSPFHEAPDKV 675

Query: 832 GCFVGCGEPLNKWL 845
           G F+        WL
Sbjct: 676 GWFLTTKVAAESWL 689


>gi|115454009|ref|NP_001050605.1| Os03g0597200 [Oryza sativa Japonica Group]
 gi|28875991|gb|AAO60000.1| putative pentatricopeptide repeat protein [Oryza sativa Japonica
           Group]
 gi|108709658|gb|ABF97453.1| DEAD/DEAH box helicase family protein, putative, expressed [Oryza
           sativa Japonica Group]
 gi|113549076|dbj|BAF12519.1| Os03g0597200 [Oryza sativa Japonica Group]
          Length = 742

 Score =  167 bits (422), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 99/302 (32%), Positives = 158/302 (52%), Gaps = 1/302 (0%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           GF+ D+ TY T V  L +    G   K++D MV++G  P+V TYN +++   +   L EA
Sbjct: 281 GFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEA 340

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
             +  QM   GC PD  T+ TLI        L+ A+D+ +++   G+SPD +T++++IN 
Sbjct: 341 KGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINA 400

Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPD 534
           L K G    A +LF EM N GC P+ VTYN +I           AL L +DM++ G    
Sbjct: 401 LCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRS 460

Query: 535 KVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYE 594
            +TY+ +++ L     ++EAE VF +M  +    +   +  L+D   K   +  A+E   
Sbjct: 461 TITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELIN 520

Query: 595 AMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTY-TLLLSCCTEA 653
            M+  GL+PN  T NS+L+ + + G +  A  +L+ M   G +  + TY TL+   C   
Sbjct: 521 QMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAG 580

Query: 654 RS 655
           R+
Sbjct: 581 RT 582



 Score =  146 bits (368), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 97/344 (28%), Positives = 148/344 (43%), Gaps = 35/344 (10%)

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
           Q G   D  TY  +V  L +  Q      +L+QMV  GC P++ T+N LI +    N L 
Sbjct: 314 QEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLE 373

Query: 413 EALD-----------------------------------VFKQMQVVGCEPDRVTYCTLI 437
           EALD                                   +F++M+  GC PD VTY TLI
Sbjct: 374 EALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLI 433

Query: 438 DIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCI 497
           D     G L  A+D+ K M++ G    T TY+ II+ L K   ++ A ++F +M  QG  
Sbjct: 434 DNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGIS 493

Query: 498 PNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAV 557
            N +T+N +I    K +    A +L   M + G +P+ +TY+ ++      G + +A  +
Sbjct: 494 RNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADI 553

Query: 558 FAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLR 617
              M    +  D   YG L++   KAG  + A +    M   G+RP     N +L +  R
Sbjct: 554 LETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFR 613

Query: 618 VGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGF 661
              + DA  L + M  +G  P   TY ++         P    F
Sbjct: 614 RNNIRDALSLFREMAEVGEPPDALTYKIVFRGLCRGGGPIKEAF 657



 Score =  145 bits (365), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 92/329 (27%), Positives = 153/329 (46%), Gaps = 35/329 (10%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           G   DE T+TT++          A  ++  +M+  GC    VT N LI+ Y +   + +A
Sbjct: 211 GVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDA 270

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
           L   +Q    G EPD++TY T ++   +   +  A+ +   M   G  PD FTY++++NC
Sbjct: 271 LGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNC 330

Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPD 534
           L K G L+ A  +  +MV++GC+P++ T+N +IA        + AL L R +   G  PD
Sbjct: 331 LCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPD 390

Query: 535 KVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVD---LWGKAGN------ 585
             T++I++  L   G    A  +F EM+     PDE  Y  L+D     GK G       
Sbjct: 391 VYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLK 450

Query: 586 --------------------------VRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVG 619
                                     + +A E ++ M   G+  N  T N+L+    +  
Sbjct: 451 DMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDK 510

Query: 620 QLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
           ++ DA+ L+  M++ GL+P+  TY  +L+
Sbjct: 511 KIDDAFELINQMISEGLQPNNITYNSILT 539



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 91/335 (27%), Positives = 160/335 (47%), Gaps = 6/335 (1%)

Query: 318 LGNTNYSMDAYQANQVLKQLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFG 377
           LG  +  +D+Y+     +QL D  V L   N L+   G + D   Y  ++ +L    +  
Sbjct: 109 LGVVHSFLDSYEG----QQLFDDAVDL-ILNQLQPLFGIQADTVVYNHLLNVLVEGSKMK 163

Query: 378 AINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLI 437
            +  +  +M   G +P+VVT+N L+ +  RA+ +  A+ + ++M   G  PD  T+ TL+
Sbjct: 164 LLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTAVLMLEEMSSRGVAPDETTFTTLM 223

Query: 438 DIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCI 497
               + G ++ A+ +  +M   G S    T +V+IN   K G ++ A     + +  G  
Sbjct: 224 QGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFE 283

Query: 498 PNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAV 557
           P+ +TYN  +    +  +   ALK+   M   G +PD  TY+IV+  L   G L+EA+ +
Sbjct: 284 PDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGI 343

Query: 558 FAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLR 617
             +M  +  +PD   +  L+        + +A +    +   G+ P+V T N L++A  +
Sbjct: 344 LNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCK 403

Query: 618 VGQLSDAYHLLQGMLNLGLKPSLQTY-TLLLSCCT 651
           VG    A  L + M N G  P   TY TL+ + C+
Sbjct: 404 VGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCS 438



 Score =  128 bits (321), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 79/293 (26%), Positives = 137/293 (46%), Gaps = 1/293 (0%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           G   D +T+  ++  L +        +L ++M   GC P+ VTYN LI +      L +A
Sbjct: 386 GVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKA 445

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
           LD+ K M+  GC    +TY T+ID   K   ++ A +++ +M   G+S +  T++ +I+ 
Sbjct: 446 LDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDG 505

Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPD 534
           L K   +  A +L  +M+++G  PN +TYN ++    K  + + A  +   M   GFE D
Sbjct: 506 LCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVD 565

Query: 535 KVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYE 594
            VTY  ++  L   G    A  V   MR K   P    Y  ++    +  N+R A   + 
Sbjct: 566 VVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFR 625

Query: 595 AMLQAGLRPNVPTCNSLLSAFLR-VGQLSDAYHLLQGMLNLGLKPSLQTYTLL 646
            M + G  P+  T   +     R  G + +A+  +  M++ G  P   ++ +L
Sbjct: 626 EMAEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFMLEMVDKGFIPEFSSFRML 678



 Score =  117 bits (294), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 92/330 (27%), Positives = 147/330 (44%), Gaps = 15/330 (4%)

Query: 294 TGNVVESVSRILRQWKWGPLAEEALGNTNYSMDAYQANQVLKQL---QDHTVALGFFNWL 350
           TGN +E    + RQ                S D Y  N ++  L    D  +AL  F  +
Sbjct: 368 TGNRLEEALDLARQVTV----------KGVSPDVYTFNILINALCKVGDPHLALRLFEEM 417

Query: 351 RRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANY 410
           +  +G   DE TY T++  L    + G    LL  M   GC  + +TYN +I    +   
Sbjct: 418 K-NSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMR 476

Query: 411 LNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSV 470
           + EA +VF QM + G   + +T+ TLID   K   +D A ++  +M + GL P+  TY+ 
Sbjct: 477 IEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNS 536

Query: 471 IINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAG 530
           I+    K G ++ A  +   M   G   ++VTY  +I    KA   Q ALK+ R M+  G
Sbjct: 537 ILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKG 596

Query: 531 FEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLV-DLWGKAGNVRKA 589
             P    Y+ V++ L     + +A ++F EM      PD   Y ++   L    G +++A
Sbjct: 597 MRPTPKAYNPVLQSLFRRNNIRDALSLFREMAEVGEPPDALTYKIVFRGLCRGGGPIKEA 656

Query: 590 WEWYEAMLQAGLRPNVPTCNSLLSAFLRVG 619
           +++   M+  G  P   +   L    L +G
Sbjct: 657 FDFMLEMVDKGFIPEFSSFRMLAEGLLNLG 686



 Score =  112 bits (281), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 100/420 (23%), Positives = 187/420 (44%), Gaps = 21/420 (5%)

Query: 378 AINKLLDQMV-RDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTL 436
           A++ +L+Q+    G Q + V YN L++     + +     V+ +M   G +PD VT+ TL
Sbjct: 128 AVDLILNQLQPLFGIQADTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTL 187

Query: 437 IDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGC 496
           +    +A  +  A+ M ++M + G++PD  T++ ++    + G ++AA ++   M+  GC
Sbjct: 188 MKALCRAHQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGC 247

Query: 497 IPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEA 556
               VT N++I    K    + AL   +     GFEPD++TY+  +  L    ++  A  
Sbjct: 248 SATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALK 307

Query: 557 VFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFL 616
           V   M ++   PD   Y ++V+   K G + +A      M+  G  P++ T N+L++A  
Sbjct: 308 VMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALC 367

Query: 617 RVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGFCHELMAVSGHPA--- 673
              +L +A  L + +   G+ P + T+ +L++   +   P+      E M  SG      
Sbjct: 368 TGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEV 427

Query: 674 --HMFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRESKRGLVDAVVDFLHKSGLKEEAGS 731
             +  + ++ S G  G+ +       L+ M S          + ++D L K    EEA  
Sbjct: 428 TYNTLIDNLCSLGKLGKAL-----DLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEE 482

Query: 732 VWEVAAQKNVYPDAVKEKGMSYWLINLHVMSDGTAVIALSRTLAWFRKQMLISGVGPSRI 791
           V+          D +  +G+S   I  + + DG               QM+  G+ P+ I
Sbjct: 483 VF----------DQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNI 532



 Score =  107 bits (267), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 78/326 (23%), Positives = 156/326 (47%), Gaps = 7/326 (2%)

Query: 334 LKQLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQP 393
           L++  D   AL   N    +  F      Y  ++  LG       +  L+ +M R+G Q 
Sbjct: 48  LREQPDPDAALRMLNAALARDDFAPGPEVYEEIIRKLGAVGALDLMKVLVAEMRREGHQV 107

Query: 394 NVVTYNRLIHSYGRANYLNEALD-VFKQMQ-VVGCEPDRVTYCTLIDIHAKAGFLDVAMD 451
            +   +  + SY      ++A+D +  Q+Q + G + D V Y  L+++  +   + +   
Sbjct: 108 KLGVVHSFLDSYEGQQLFDDAVDLILNQLQPLFGIQADTVVYNHLLNVLVEGSKMKLLES 167

Query: 452 MYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQA 511
           +Y +M A G+ PD  T++ ++  L +A  ++ A  +  EM ++G  P+  T+  ++    
Sbjct: 168 VYSEMGARGIKPDVVTFNTLMKALCRAHQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFV 227

Query: 512 KARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHC--GYLDEAEAVFAEMRRKNWVPD 569
           +  + ++AL++   M   G    KVT ++++   G+C  G +++A     +     + PD
Sbjct: 228 EEGSIEAALRVKARMLEMGCSATKVTVNVLIN--GYCKLGRVEDALGYIQQEIADGFEPD 285

Query: 570 EPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQ 629
           +  Y   V+   +  +V  A +  + M+Q G  P+V T N +++   + GQL +A  +L 
Sbjct: 286 QITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILN 345

Query: 630 GMLNLGLKPSLQTY-TLLLSCCTEAR 654
            M++ G  P + T+ TL+ + CT  R
Sbjct: 346 QMVDRGCLPDITTFNTLIAALCTGNR 371



 Score = 69.7 bits (169), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 74/305 (24%), Positives = 122/305 (40%), Gaps = 15/305 (4%)

Query: 451 DMYKKMQAAGLSPDTF-----TYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNI 505
           D   +M  A L+ D F      Y  II  LG  G L     L  EM  +G    L   + 
Sbjct: 55  DAALRMLNAALARDDFAPGPEVYEEIIRKLGAVGALDLMKVLVAEMRREGHQVKLGVVHS 114

Query: 506 MIALQAKARNYQSALKLYRDMQNA--GFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRR 563
            +      + +  A+ L  +      G + D V Y+ ++ VL     +   E+V++EM  
Sbjct: 115 FLDSYEGQQLFDDAVDLILNQLQPLFGIQADTVVYNHLLNVLVEGSKMKLLESVYSEMGA 174

Query: 564 KNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSD 623
           +   PD   +  L+    +A  VR A    E M   G+ P+  T  +L+  F+  G +  
Sbjct: 175 RGIKPDVVTFNTLMKALCRAHQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEA 234

Query: 624 AYHLLQGMLNLGLKPSLQTYTLLLS-CCTEARSPYDMGFCHELMAVSGHPAHMFLLSMPS 682
           A  +   ML +G   +  T  +L++  C   R    +G+  + +A    P  +   +   
Sbjct: 235 ALRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFV- 293

Query: 683 PGPDGQNVRDHVGSFLEMMH---SEDRESKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQK 739
              +G    DHVG  L++M     E  +      + VV+ L K+G  EEA  +      +
Sbjct: 294 ---NGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDR 350

Query: 740 NVYPD 744
              PD
Sbjct: 351 GCLPD 355


>gi|125544747|gb|EAY90886.1| hypothetical protein OsI_12495 [Oryza sativa Indica Group]
          Length = 742

 Score =  167 bits (422), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 99/302 (32%), Positives = 158/302 (52%), Gaps = 1/302 (0%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           GF+ D+ TY T V  L +    G   K++D MV++G  P+V TYN +++   +   L EA
Sbjct: 281 GFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEA 340

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
             +  QM   GC PD  T+ TLI        L+ A+D+ +++   G+SPD +T++++IN 
Sbjct: 341 KGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINA 400

Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPD 534
           L K G    A +LF EM N GC P+ VTYN +I           AL L +DM++ G    
Sbjct: 401 LCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRS 460

Query: 535 KVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYE 594
            +TY+ +++ L     ++EAE VF +M  +    +   +  L+D   K   +  A+E   
Sbjct: 461 TITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELIN 520

Query: 595 AMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTY-TLLLSCCTEA 653
            M+  GL+PN  T NS+L+ + + G +  A  +L+ M   G +  + TY TL+   C   
Sbjct: 521 QMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAG 580

Query: 654 RS 655
           R+
Sbjct: 581 RT 582



 Score =  146 bits (368), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 97/344 (28%), Positives = 148/344 (43%), Gaps = 35/344 (10%)

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
           Q G   D  TY  +V  L +  Q      +L+QMV  GC P++ T+N LI +    N L 
Sbjct: 314 QEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLE 373

Query: 413 EALD-----------------------------------VFKQMQVVGCEPDRVTYCTLI 437
           EALD                                   +F++M+  GC PD VTY TLI
Sbjct: 374 EALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLI 433

Query: 438 DIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCI 497
           D     G L  A+D+ K M++ G    T TY+ II+ L K   ++ A ++F +M  QG  
Sbjct: 434 DNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGIS 493

Query: 498 PNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAV 557
            N +T+N +I    K +    A +L   M + G +P+ +TY+ ++      G + +A  +
Sbjct: 494 RNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADI 553

Query: 558 FAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLR 617
              M    +  D   YG L++   KAG  + A +    M   G+RP     N +L +  R
Sbjct: 554 LETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFR 613

Query: 618 VGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGF 661
              + DA  L + M  +G  P   TY ++         P    F
Sbjct: 614 RNNIRDALSLFREMAEVGEPPDALTYKIVFRGLCRGGGPIKEAF 657



 Score =  145 bits (365), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 92/329 (27%), Positives = 153/329 (46%), Gaps = 35/329 (10%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           G   DE T+TT++          A  ++  +M+  GC    VT N LI+ Y +   + +A
Sbjct: 211 GVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDA 270

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
           L   +Q    G EPD++TY T ++   +   +  A+ +   M   G  PD FTY++++NC
Sbjct: 271 LGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNC 330

Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPD 534
           L K G L+ A  +  +MV++GC+P++ T+N +IA        + AL L R +   G  PD
Sbjct: 331 LCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPD 390

Query: 535 KVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVD---LWGKAGN------ 585
             T++I++  L   G    A  +F EM+     PDE  Y  L+D     GK G       
Sbjct: 391 VYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLK 450

Query: 586 --------------------------VRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVG 619
                                     + +A E ++ M   G+  N  T N+L+    +  
Sbjct: 451 DMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDK 510

Query: 620 QLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
           ++ DA+ L+  M++ GL+P+  TY  +L+
Sbjct: 511 KIDDAFELINQMISEGLQPNNITYNSILT 539



 Score =  131 bits (329), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 91/335 (27%), Positives = 160/335 (47%), Gaps = 6/335 (1%)

Query: 318 LGNTNYSMDAYQANQVLKQLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFG 377
           LG  +  +D+Y+     +QL D  V L   N L+   G + D   Y  ++ +L    +  
Sbjct: 109 LGVVHSFLDSYEG----QQLFDDAVDL-ILNQLQPLFGIQADTVVYNHLLNVLVEGSKMK 163

Query: 378 AINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLI 437
            +  +  +M   G +P+VVT+N L+ +  RA+ +  A+ + ++M   G  PD  T+ TL+
Sbjct: 164 LLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTAVIMLEEMSSRGVAPDETTFTTLM 223

Query: 438 DIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCI 497
               + G ++ A+ +  +M   G S    T +V+IN   K G ++ A     + +  G  
Sbjct: 224 QGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFE 283

Query: 498 PNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAV 557
           P+ +TYN  +    +  +   ALK+   M   G +PD  TY+IV+  L   G L+EA+ +
Sbjct: 284 PDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGI 343

Query: 558 FAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLR 617
             +M  +  +PD   +  L+        + +A +    +   G+ P+V T N L++A  +
Sbjct: 344 LNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCK 403

Query: 618 VGQLSDAYHLLQGMLNLGLKPSLQTY-TLLLSCCT 651
           VG    A  L + M N G  P   TY TL+ + C+
Sbjct: 404 VGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCS 438



 Score =  128 bits (321), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 79/293 (26%), Positives = 137/293 (46%), Gaps = 1/293 (0%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           G   D +T+  ++  L +        +L ++M   GC P+ VTYN LI +      L +A
Sbjct: 386 GVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKA 445

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
           LD+ K M+  GC    +TY T+ID   K   ++ A +++ +M   G+S +  T++ +I+ 
Sbjct: 446 LDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDG 505

Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPD 534
           L K   +  A +L  +M+++G  PN +TYN ++    K  + + A  +   M   GFE D
Sbjct: 506 LCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVD 565

Query: 535 KVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYE 594
            VTY  ++  L   G    A  V   MR K   P    Y  ++    +  N+R A   + 
Sbjct: 566 VVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFR 625

Query: 595 AMLQAGLRPNVPTCNSLLSAFLR-VGQLSDAYHLLQGMLNLGLKPSLQTYTLL 646
            M + G  P+  T   +     R  G + +A+  +  M++ G  P   ++ +L
Sbjct: 626 EMAEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFMLEMVDKGFIPEFSSFRML 678



 Score =  117 bits (294), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 92/330 (27%), Positives = 147/330 (44%), Gaps = 15/330 (4%)

Query: 294 TGNVVESVSRILRQWKWGPLAEEALGNTNYSMDAYQANQVLKQL---QDHTVALGFFNWL 350
           TGN +E    + RQ                S D Y  N ++  L    D  +AL  F  +
Sbjct: 368 TGNRLEEALDLARQVTV----------KGVSPDVYTFNILINALCKVGDPHLALRLFEEM 417

Query: 351 RRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANY 410
           +  +G   DE TY T++  L    + G    LL  M   GC  + +TYN +I    +   
Sbjct: 418 K-NSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMR 476

Query: 411 LNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSV 470
           + EA +VF QM + G   + +T+ TLID   K   +D A ++  +M + GL P+  TY+ 
Sbjct: 477 IEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNS 536

Query: 471 IINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAG 530
           I+    K G ++ A  +   M   G   ++VTY  +I    KA   Q ALK+ R M+  G
Sbjct: 537 ILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKG 596

Query: 531 FEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLV-DLWGKAGNVRKA 589
             P    Y+ V++ L     + +A ++F EM      PD   Y ++   L    G +++A
Sbjct: 597 MRPTPKAYNPVLQSLFRRNNIRDALSLFREMAEVGEPPDALTYKIVFRGLCRGGGPIKEA 656

Query: 590 WEWYEAMLQAGLRPNVPTCNSLLSAFLRVG 619
           +++   M+  G  P   +   L    L +G
Sbjct: 657 FDFMLEMVDKGFIPEFSSFRMLAEGLLNLG 686



 Score =  113 bits (282), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 100/420 (23%), Positives = 187/420 (44%), Gaps = 21/420 (5%)

Query: 378 AINKLLDQMV-RDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTL 436
           A++ +L+Q+    G Q + V YN L++     + +     V+ +M   G +PD VT+ TL
Sbjct: 128 AVDLILNQLQPLFGIQADTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTL 187

Query: 437 IDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGC 496
           +    +A  +  A+ M ++M + G++PD  T++ ++    + G ++AA ++   M+  GC
Sbjct: 188 MKALCRAHQVRTAVIMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGC 247

Query: 497 IPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEA 556
               VT N++I    K    + AL   +     GFEPD++TY+  +  L    ++  A  
Sbjct: 248 SATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALK 307

Query: 557 VFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFL 616
           V   M ++   PD   Y ++V+   K G + +A      M+  G  P++ T N+L++A  
Sbjct: 308 VMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALC 367

Query: 617 RVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGFCHELMAVSGHPA--- 673
              +L +A  L + +   G+ P + T+ +L++   +   P+      E M  SG      
Sbjct: 368 TGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEV 427

Query: 674 --HMFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRESKRGLVDAVVDFLHKSGLKEEAGS 731
             +  + ++ S G  G+ +       L+ M S          + ++D L K    EEA  
Sbjct: 428 TYNTLIDNLCSLGKLGKAL-----DLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEE 482

Query: 732 VWEVAAQKNVYPDAVKEKGMSYWLINLHVMSDGTAVIALSRTLAWFRKQMLISGVGPSRI 791
           V+          D +  +G+S   I  + + DG               QM+  G+ P+ I
Sbjct: 483 VF----------DQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNI 532



 Score =  107 bits (266), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 78/326 (23%), Positives = 156/326 (47%), Gaps = 7/326 (2%)

Query: 334 LKQLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQP 393
           L++  D   AL   N    +  F      Y  ++  LG       +  L+ +M R+G Q 
Sbjct: 48  LREQPDPDAALRMLNAALARDDFAPGPEVYEEIIRKLGAVGALDLMKVLVAEMRREGHQV 107

Query: 394 NVVTYNRLIHSYGRANYLNEALD-VFKQMQ-VVGCEPDRVTYCTLIDIHAKAGFLDVAMD 451
            +   +  + SY      ++A+D +  Q+Q + G + D V Y  L+++  +   + +   
Sbjct: 108 KLGVVHSFLDSYEGQQLFDDAVDLILNQLQPLFGIQADTVVYNHLLNVLVEGSKMKLLES 167

Query: 452 MYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQA 511
           +Y +M A G+ PD  T++ ++  L +A  ++ A  +  EM ++G  P+  T+  ++    
Sbjct: 168 VYSEMGARGIKPDVVTFNTLMKALCRAHQVRTAVIMLEEMSSRGVAPDETTFTTLMQGFV 227

Query: 512 KARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHC--GYLDEAEAVFAEMRRKNWVPD 569
           +  + ++AL++   M   G    KVT ++++   G+C  G +++A     +     + PD
Sbjct: 228 EEGSIEAALRVKARMLEMGCSATKVTVNVLIN--GYCKLGRVEDALGYIQQEIADGFEPD 285

Query: 570 EPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQ 629
           +  Y   V+   +  +V  A +  + M+Q G  P+V T N +++   + GQL +A  +L 
Sbjct: 286 QITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILN 345

Query: 630 GMLNLGLKPSLQTY-TLLLSCCTEAR 654
            M++ G  P + T+ TL+ + CT  R
Sbjct: 346 QMVDRGCLPDITTFNTLIAALCTGNR 371



 Score = 69.7 bits (169), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 74/305 (24%), Positives = 122/305 (40%), Gaps = 15/305 (4%)

Query: 451 DMYKKMQAAGLSPDTF-----TYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNI 505
           D   +M  A L+ D F      Y  II  LG  G L     L  EM  +G    L   + 
Sbjct: 55  DAALRMLNAALARDDFAPGPEVYEEIIRKLGAVGALDLMKVLVAEMRREGHQVKLGVVHS 114

Query: 506 MIALQAKARNYQSALKLYRDMQNA--GFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRR 563
            +      + +  A+ L  +      G + D V Y+ ++ VL     +   E+V++EM  
Sbjct: 115 FLDSYEGQQLFDDAVDLILNQLQPLFGIQADTVVYNHLLNVLVEGSKMKLLESVYSEMGA 174

Query: 564 KNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSD 623
           +   PD   +  L+    +A  VR A    E M   G+ P+  T  +L+  F+  G +  
Sbjct: 175 RGIKPDVVTFNTLMKALCRAHQVRTAVIMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEA 234

Query: 624 AYHLLQGMLNLGLKPSLQTYTLLLS-CCTEARSPYDMGFCHELMAVSGHPAHMFLLSMPS 682
           A  +   ML +G   +  T  +L++  C   R    +G+  + +A    P  +   +   
Sbjct: 235 ALRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFV- 293

Query: 683 PGPDGQNVRDHVGSFLEMMH---SEDRESKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQK 739
              +G    DHVG  L++M     E  +      + VV+ L K+G  EEA  +      +
Sbjct: 294 ---NGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDR 350

Query: 740 NVYPD 744
              PD
Sbjct: 351 GCLPD 355


>gi|357115308|ref|XP_003559432.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22670,
           mitochondrial-like [Brachypodium distachyon]
          Length = 570

 Score =  167 bits (422), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 125/478 (26%), Positives = 215/478 (44%), Gaps = 11/478 (2%)

Query: 280 IPAGLAPFSRHFASTGNVVESVSRILRQWKWGPLAEE-ALGNTNYSMDAYQANQVLKQL- 337
           +P   AP S   A     ++ VSRIL      P A   A+      +     +++L++  
Sbjct: 78  LPGCPAPASHEEAEFEADIDEVSRILSSHFASPEAIVIAMDCCPVRVSGRMVDKILRRFG 137

Query: 338 QDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVT 397
            D   A GFF W   Q G+ H    Y  MV ILG+ +QF  +  L+ QM   GC  ++ T
Sbjct: 138 SDWVAAFGFFMWAGAQEGYCHHADLYNLMVDILGKFKQFDLLWGLIRQMDEIGCLVSLAT 197

Query: 398 YNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQ 457
             +++     AN   +A+D F +M   G   D      L+D   K   +  A  ++++++
Sbjct: 198 MTKVMRRLAGANRWTDAIDAFNKMDQFGVVRDTKAMNALLDTLCKEKSVKRARGVFQELR 257

Query: 458 AAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQ 517
              + PD  +++ +++   +A  L  A     EM   G  P+++TY  +I      +++Q
Sbjct: 258 GV-VPPDESSFNTLVHGWCQARMLNEARDTMKEMEEHGFSPSVITYTSLIEAYCMEKDFQ 316

Query: 518 SALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLV 577
           +   +  +M + G  P+ +TY+IVM  LG  G   EA  VF +++R   VPD   Y  ++
Sbjct: 317 TVYAILNEMCSKGCRPNVITYTIVMHALGKAGRTQEALDVFDKVKRDGCVPDASFYNSII 376

Query: 578 DLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLK 637
            + G+AG +  A   ++ M + G+ P V   N+++SA     Q  +A  +L  M     K
Sbjct: 377 YILGRAGRLEDANSVFDEMCRTGIPPTVAIFNTMISAACDHSQAENALKILVKMEEQSCK 436

Query: 638 PSLQTYTLLLSCCTEARSPYDMGF--CHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVG 695
           P ++TYT LL  C + +    + F  CH            ++L +     +G+  +  + 
Sbjct: 437 PDIKTYTPLLKLCCKRQWMKILPFLICHMFRKDISPDFSTYILLVTWLCRNGKPAQSCL- 495

Query: 696 SFLEMMHSEDRESKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAVKEKGMSY 753
            FLE M  +    K+   D V++ L K  L      +  +  +      A+K  G SY
Sbjct: 496 -FLEEMVLKGFMPKQETFDLVMEKLDKGNLHSAKKKIQHLKLRAA----ALKHTGSSY 548


>gi|125587025|gb|EAZ27689.1| hypothetical protein OsJ_11637 [Oryza sativa Japonica Group]
          Length = 650

 Score =  166 bits (421), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 99/302 (32%), Positives = 158/302 (52%), Gaps = 1/302 (0%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           GF+ D+ TY T V  L +    G   K++D MV++G  P+V TYN +++   +   L EA
Sbjct: 189 GFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEA 248

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
             +  QM   GC PD  T+ TLI        L+ A+D+ +++   G+SPD +T++++IN 
Sbjct: 249 KGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINA 308

Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPD 534
           L K G    A +LF EM N GC P+ VTYN +I           AL L +DM++ G    
Sbjct: 309 LCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRS 368

Query: 535 KVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYE 594
            +TY+ +++ L     ++EAE VF +M  +    +   +  L+D   K   +  A+E   
Sbjct: 369 TITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELIN 428

Query: 595 AMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTY-TLLLSCCTEA 653
            M+  GL+PN  T NS+L+ + + G +  A  +L+ M   G +  + TY TL+   C   
Sbjct: 429 QMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAG 488

Query: 654 RS 655
           R+
Sbjct: 489 RT 490



 Score =  145 bits (366), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 97/344 (28%), Positives = 148/344 (43%), Gaps = 35/344 (10%)

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
           Q G   D  TY  +V  L +  Q      +L+QMV  GC P++ T+N LI +    N L 
Sbjct: 222 QEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLE 281

Query: 413 EALD-----------------------------------VFKQMQVVGCEPDRVTYCTLI 437
           EALD                                   +F++M+  GC PD VTY TLI
Sbjct: 282 EALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLI 341

Query: 438 DIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCI 497
           D     G L  A+D+ K M++ G    T TY+ II+ L K   ++ A ++F +M  QG  
Sbjct: 342 DNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGIS 401

Query: 498 PNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAV 557
            N +T+N +I    K +    A +L   M + G +P+ +TY+ ++      G + +A  +
Sbjct: 402 RNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADI 461

Query: 558 FAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLR 617
              M    +  D   YG L++   KAG  + A +    M   G+RP     N +L +  R
Sbjct: 462 LETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFR 521

Query: 618 VGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGF 661
              + DA  L + M  +G  P   TY ++         P    F
Sbjct: 522 RNNIRDALSLFREMAEVGEPPDALTYKIVFRGLCRGGGPIKEAF 565



 Score =  145 bits (365), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 92/329 (27%), Positives = 153/329 (46%), Gaps = 35/329 (10%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           G   DE T+TT++          A  ++  +M+  GC    VT N LI+ Y +   + +A
Sbjct: 119 GVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDA 178

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
           L   +Q    G EPD++TY T ++   +   +  A+ +   M   G  PD FTY++++NC
Sbjct: 179 LGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNC 238

Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPD 534
           L K G L+ A  +  +MV++GC+P++ T+N +IA        + AL L R +   G  PD
Sbjct: 239 LCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPD 298

Query: 535 KVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVD---LWGKAGN------ 585
             T++I++  L   G    A  +F EM+     PDE  Y  L+D     GK G       
Sbjct: 299 VYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLK 358

Query: 586 --------------------------VRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVG 619
                                     + +A E ++ M   G+  N  T N+L+    +  
Sbjct: 359 DMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDK 418

Query: 620 QLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
           ++ DA+ L+  M++ GL+P+  TY  +L+
Sbjct: 419 KIDDAFELINQMISEGLQPNNITYNSILT 447



 Score =  130 bits (326), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 91/335 (27%), Positives = 160/335 (47%), Gaps = 6/335 (1%)

Query: 318 LGNTNYSMDAYQANQVLKQLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFG 377
           LG  +  +D+Y+     +QL D  V L   N L+   G + D   Y  ++ +L    +  
Sbjct: 17  LGVVHSFLDSYEG----QQLFDDAVDL-ILNQLQPLFGIQADTVVYNHLLNVLVEGSKMK 71

Query: 378 AINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLI 437
            +  +  +M   G +P+VVT+N L+ +  RA+ +  A+ + ++M   G  PD  T+ TL+
Sbjct: 72  LLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTAVLMLEEMSSRGVAPDETTFTTLM 131

Query: 438 DIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCI 497
               + G ++ A+ +  +M   G S    T +V+IN   K G ++ A     + +  G  
Sbjct: 132 QGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFE 191

Query: 498 PNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAV 557
           P+ +TYN  +    +  +   ALK+   M   G +PD  TY+IV+  L   G L+EA+ +
Sbjct: 192 PDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGI 251

Query: 558 FAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLR 617
             +M  +  +PD   +  L+        + +A +    +   G+ P+V T N L++A  +
Sbjct: 252 LNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCK 311

Query: 618 VGQLSDAYHLLQGMLNLGLKPSLQTY-TLLLSCCT 651
           VG    A  L + M N G  P   TY TL+ + C+
Sbjct: 312 VGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCS 346



 Score =  127 bits (318), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 82/301 (27%), Positives = 140/301 (46%), Gaps = 4/301 (1%)

Query: 350 LRRQA---GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYG 406
           L RQ    G   D +T+  ++  L +        +L ++M   GC P+ VTYN LI +  
Sbjct: 286 LARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLC 345

Query: 407 RANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTF 466
               L +ALD+ K M+  GC    +TY T+ID   K   ++ A +++ +M   G+S +  
Sbjct: 346 SLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAI 405

Query: 467 TYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDM 526
           T++ +I+ L K   +  A +L  +M+++G  PN +TYN ++    K  + + A  +   M
Sbjct: 406 TFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETM 465

Query: 527 QNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNV 586
              GFE D VTY  ++  L   G    A  V   MR K   P    Y  ++    +  N+
Sbjct: 466 TANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNI 525

Query: 587 RKAWEWYEAMLQAGLRPNVPTCNSLLSAFLR-VGQLSDAYHLLQGMLNLGLKPSLQTYTL 645
           R A   +  M + G  P+  T   +     R  G + +A+  +  M++ G  P   ++ +
Sbjct: 526 RDALSLFREMAEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFMLEMVDKGFIPEFSSFRM 585

Query: 646 L 646
           L
Sbjct: 586 L 586



 Score =  117 bits (292), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 92/330 (27%), Positives = 147/330 (44%), Gaps = 15/330 (4%)

Query: 294 TGNVVESVSRILRQWKWGPLAEEALGNTNYSMDAYQANQVLKQL---QDHTVALGFFNWL 350
           TGN +E    + RQ                S D Y  N ++  L    D  +AL  F  +
Sbjct: 276 TGNRLEEALDLARQVTV----------KGVSPDVYTFNILINALCKVGDPHLALRLFEEM 325

Query: 351 RRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANY 410
           +  +G   DE TY T++  L    + G    LL  M   GC  + +TYN +I    +   
Sbjct: 326 K-NSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMR 384

Query: 411 LNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSV 470
           + EA +VF QM + G   + +T+ TLID   K   +D A ++  +M + GL P+  TY+ 
Sbjct: 385 IEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNS 444

Query: 471 IINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAG 530
           I+    K G ++ A  +   M   G   ++VTY  +I    KA   Q ALK+ R M+  G
Sbjct: 445 ILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKG 504

Query: 531 FEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLV-DLWGKAGNVRKA 589
             P    Y+ V++ L     + +A ++F EM      PD   Y ++   L    G +++A
Sbjct: 505 MRPTPKAYNPVLQSLFRRNNIRDALSLFREMAEVGEPPDALTYKIVFRGLCRGGGPIKEA 564

Query: 590 WEWYEAMLQAGLRPNVPTCNSLLSAFLRVG 619
           +++   M+  G  P   +   L    L +G
Sbjct: 565 FDFMLEMVDKGFIPEFSSFRMLAEGLLNLG 594



 Score =  112 bits (280), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 100/420 (23%), Positives = 187/420 (44%), Gaps = 21/420 (5%)

Query: 378 AINKLLDQMV-RDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTL 436
           A++ +L+Q+    G Q + V YN L++     + +     V+ +M   G +PD VT+ TL
Sbjct: 36  AVDLILNQLQPLFGIQADTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTL 95

Query: 437 IDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGC 496
           +    +A  +  A+ M ++M + G++PD  T++ ++    + G ++AA ++   M+  GC
Sbjct: 96  MKALCRAHQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGC 155

Query: 497 IPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEA 556
               VT N++I    K    + AL   +     GFEPD++TY+  +  L    ++  A  
Sbjct: 156 SATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALK 215

Query: 557 VFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFL 616
           V   M ++   PD   Y ++V+   K G + +A      M+  G  P++ T N+L++A  
Sbjct: 216 VMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALC 275

Query: 617 RVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGFCHELMAVSGHPA--- 673
              +L +A  L + +   G+ P + T+ +L++   +   P+      E M  SG      
Sbjct: 276 TGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEV 335

Query: 674 --HMFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRESKRGLVDAVVDFLHKSGLKEEAGS 731
             +  + ++ S G  G+ +       L+ M S          + ++D L K    EEA  
Sbjct: 336 TYNTLIDNLCSLGKLGKAL-----DLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEE 390

Query: 732 VWEVAAQKNVYPDAVKEKGMSYWLINLHVMSDGTAVIALSRTLAWFRKQMLISGVGPSRI 791
           V+          D +  +G+S   I  + + DG               QM+  G+ P+ I
Sbjct: 391 VF----------DQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNI 440


>gi|449462001|ref|XP_004148730.1| PREDICTED: pentatricopeptide repeat-containing protein At5g46580,
           chloroplastic-like [Cucumis sativus]
 gi|449521148|ref|XP_004167592.1| PREDICTED: pentatricopeptide repeat-containing protein At5g46580,
           chloroplastic-like [Cucumis sativus]
          Length = 710

 Score =  166 bits (421), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 127/536 (23%), Positives = 240/536 (44%), Gaps = 43/536 (8%)

Query: 346 FFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSY 405
           FFNW++ Q  F  +   Y   +  L   RQF  I  L ++M+  G + + +TY+ +I   
Sbjct: 171 FFNWIKSQNLFPMETIFYNVAMKSLRYGRQFQLIEDLANEMISAGIELDNITYSTIITCA 230

Query: 406 GRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDT 465
            + +  ++A++ F++M   G  PD VTY  ++D++A  G ++  + +Y++ +A+G +PD 
Sbjct: 231 KKCSRFDKAMEWFERMYKTGLMPDEVTYSAILDVYANLGKVEEVLSLYERGRASGWTPDP 290

Query: 466 FTYSVI-----------------------------------INCLGKAGHLQAAHQLFCE 490
           +T+SV+                                   ++ +GKAG    A  LF E
Sbjct: 291 YTFSVLGKMFGEAGDYDGIMYVLQEMKSIEMQPNLVVYNTLLDAMGKAGKPGFARSLFDE 350

Query: 491 MVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGY 550
           MV  G  PN  T   ++ +  KAR  + AL L+  M++ G+  D + Y+ ++ +    G 
Sbjct: 351 MVESGITPNEKTLTALVKIYGKARWARDALDLWERMRSNGWPMDFILYNTLLNMCADLGL 410

Query: 551 LDEAEAVFAEMRR-KNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCN 609
            +EAE +F EM++ K+  PD   Y  +++++G  GNV+++ E +E ML+ G+  NV  C 
Sbjct: 411 EEEAETLFEEMKKSKHSRPDSWSYTAMLNIYGSGGNVKRSMELFEEMLELGVEINVMCCT 470

Query: 610 SLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGFCHELMAVS 669
            L+    + G++ D   +    +  G+KP  +    LLS  +   +  D+      +  +
Sbjct: 471 CLIQCLGKSGRIDDLVRVFNVSVQKGIKPDDRLCGCLLSVLSLCYNSEDINKVFTCLQQA 530

Query: 670 GHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRESKRGLVDAVVDFLHKSGLKEEA 729
                 F+  +       + V++    F  ++     E++R   + ++D      L+E A
Sbjct: 531 NPKLVSFINLLQQNDITFEVVKNE---FRNILGETAPEARRPFCNCLIDICRNQNLRERA 587

Query: 730 GSVWEVAAQKNVYPDAVKEKGMSYWLINLHVMSDGTAVIALSRTLAWFRKQMLISGVGPS 789
             +  + +   +YP  +  K  + W +++  +S G A  AL   +    K +      P 
Sbjct: 588 HELLYLGSLYGLYP-GLHNKTETEWCLDVRSLSVGAAQTALEEWMITLSKIVQREEALPE 646

Query: 790 RIDIVTGWGRRSRVTGTSLVRQAVQELLHMFSFPFFTENGNSGCFVGCGEPLNKWL 845
            +   TG G      G +    +    +   + PF      +G FV   E L  W+
Sbjct: 647 LLSAQTGAGTHRFSQGLA---NSFASHVDKLAAPFQLREDRAGWFVATREDLVTWV 699


>gi|356562783|ref|XP_003549648.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74850,
           chloroplastic-like [Glycine max]
          Length = 859

 Score =  166 bits (421), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 118/479 (24%), Positives = 213/479 (44%), Gaps = 40/479 (8%)

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
           ++G   D +TY+ +V   G+  +   +++LL +M   G  P++ +YN L+ +Y     + 
Sbjct: 270 ESGIVPDINTYSYLVQTFGKLNRLEKVSELLREMESGGNLPDITSYNVLLEAYAELGSIK 329

Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
           EA+DVF+QMQ  GC  +  TY  L++++ K G  D   D++ +M+ +   PD  TY+++I
Sbjct: 330 EAMDVFRQMQAAGCVANAATYSVLLNLYGKHGRYDDVRDIFLEMKVSNTDPDAGTYNILI 389

Query: 473 NCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFE 532
              G+ G+ +    LF +MV +   PN+ TY  +I    K   Y+ A K+   M   G  
Sbjct: 390 QVFGEGGYFKEVVTLFHDMVEENVEPNMETYEGLIFACGKGGLYEDAKKILLHMNEKGIV 449

Query: 533 PDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEW 592
           P    Y+ V+E  G     +EA  VF  M      P    Y   +  + + G  ++A   
Sbjct: 450 PSSKAYTGVIEAFGQAALYEEALVVFNTMNEVGSNPTVETYNSFIHAFARGGLYKEAEAI 509

Query: 593 YEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSC-CT 651
              M ++GL+ +V + N ++ AF + GQ  +A      M     +P+  T  ++LS  C+
Sbjct: 510 LSRMNESGLKRDVHSFNGVIKAFRQGGQYEEAVKSYVEMEKANCEPNELTLEVVLSVYCS 569

Query: 652 EARSPYDMGFCHELMAVSGHPAHM---FLLSMPSPGPDGQNVRDHVGSFLEMMHSE---- 704
                       E+ A    P+ M    +L++ +      +  + +   + M  S+    
Sbjct: 570 AGLVDESEEQFQEIKASGILPSVMCYCLMLALYAKNDRLNDAYNLIDEMITMRVSDIHQG 629

Query: 705 ---------DRESKRGLVDAVVDFLHKSGL-------------------KEEAGSVWEVA 736
                    D ES   +V+ V D L+  G                    +E A  V   A
Sbjct: 630 IGQMIKGDFDDESNWQIVEYVFDKLNSEGCGLGMRFYNALLEALWWMFQRERAARVLNEA 689

Query: 737 AQKNVYPDAVKEKGMSYWLINLHVMSDGTAVIALSRTLAWFRKQMLISGVGPSRIDIVT 795
           +++ ++P+  ++  +  W +++H MS+G A+ ALS    W      +S  G    ++ T
Sbjct: 690 SKRGLFPELFRKSKL-VWSVDVHRMSEGGALTALS---VWLNNMHEMSRTGNDLPELAT 744



 Score =  164 bits (415), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 101/354 (28%), Positives = 175/354 (49%), Gaps = 36/354 (10%)

Query: 336 QLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGR-------------------AR-- 374
           Q  D   +L  F +++RQ   K +EH YT M+ +LGR                   AR  
Sbjct: 112 QRGDWQRSLRLFKYMQRQIWCKPNEHIYTIMITLLGREGLLDKCREVFDEMPSNGVARTV 171

Query: 375 --------------QFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEAL-DVFK 419
                         QF A  +LL+ M ++   P+++TYN +I++  R     E L  +F 
Sbjct: 172 YVYTAVINAYGRNGQFHASLELLNGMKQERVSPSILTYNTVINACARGGLDWEGLLGLFA 231

Query: 420 QMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAG 479
           +M+  G +PD +TY TL+   A  G  D A  +++ M  +G+ PD  TYS ++   GK  
Sbjct: 232 EMRHEGIQPDVITYNTLLGACAHRGLGDEAEMVFRTMNESGIVPDINTYSYLVQTFGKLN 291

Query: 480 HLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYS 539
            L+   +L  EM + G +P++ +YN+++   A+  + + A+ ++R MQ AG   +  TYS
Sbjct: 292 RLEKVSELLREMESGGNLPDITSYNVLLEAYAELGSIKEAMDVFRQMQAAGCVANAATYS 351

Query: 540 IVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQA 599
           +++ + G  G  D+   +F EM+  N  PD   Y +L+ ++G+ G  ++    +  M++ 
Sbjct: 352 VLLNLYGKHGRYDDVRDIFLEMKVSNTDPDAGTYNILIQVFGEGGYFKEVVTLFHDMVEE 411

Query: 600 GLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEA 653
            + PN+ T   L+ A  + G   DA  +L  M   G+ PS + YT ++    +A
Sbjct: 412 NVEPNMETYEGLIFACGKGGLYEDAKKILLHMNEKGIVPSSKAYTGVIEAFGQA 465



 Score =  152 bits (384), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 87/300 (29%), Positives = 149/300 (49%), Gaps = 1/300 (0%)

Query: 344 LGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIH 403
           LG F  +R + G + D  TY T++G             +   M   G  P++ TY+ L+ 
Sbjct: 227 LGLFAEMRHE-GIQPDVITYNTLLGACAHRGLGDEAEMVFRTMNESGIVPDINTYSYLVQ 285

Query: 404 SYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSP 463
           ++G+ N L +  ++ ++M+  G  PD  +Y  L++ +A+ G +  AMD++++MQAAG   
Sbjct: 286 TFGKLNRLEKVSELLREMESGGNLPDITSYNVLLEAYAELGSIKEAMDVFRQMQAAGCVA 345

Query: 464 DTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLY 523
           +  TYSV++N  GK G       +F EM      P+  TYNI+I +  +   ++  + L+
Sbjct: 346 NAATYSVLLNLYGKHGRYDDVRDIFLEMKVSNTDPDAGTYNILIQVFGEGGYFKEVVTLF 405

Query: 524 RDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKA 583
            DM     EP+  TY  ++   G  G  ++A+ +   M  K  VP    Y  +++ +G+A
Sbjct: 406 HDMVEENVEPNMETYEGLIFACGKGGLYEDAKKILLHMNEKGIVPSSKAYTGVIEAFGQA 465

Query: 584 GNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTY 643
               +A   +  M + G  P V T NS + AF R G   +A  +L  M   GLK  + ++
Sbjct: 466 ALYEEALVVFNTMNEVGSNPTVETYNSFIHAFARGGLYKEAEAILSRMNESGLKRDVHSF 525



 Score = 85.5 bits (210), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 75/319 (23%), Positives = 143/319 (44%), Gaps = 10/319 (3%)

Query: 441 AKAGFLDVAMDMYKKMQ-AAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPN 499
           A+ G    ++ ++K MQ      P+   Y+++I  LG+ G L    ++F EM + G    
Sbjct: 111 AQRGDWQRSLRLFKYMQRQIWCKPNEHIYTIMITLLGREGLLDKCREVFDEMPSNGVART 170

Query: 500 LVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAE-AVF 558
           +  Y  +I    +   + ++L+L   M+     P  +TY+ V+      G   E    +F
Sbjct: 171 VYVYTAVINAYGRNGQFHASLELLNGMKQERVSPSILTYNTVINACARGGLDWEGLLGLF 230

Query: 559 AEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRV 618
           AEMR +   PD   Y  L+      G   +A   +  M ++G+ P++ T + L+  F ++
Sbjct: 231 AEMRHEGIQPDVITYNTLLGACAHRGLGDEAEMVFRTMNESGIVPDINTYSYLVQTFGKL 290

Query: 619 GQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYD-MGFCHELMA---VSGHPAH 674
            +L     LL+ M + G  P + +Y +LL    E  S  + M    ++ A   V+    +
Sbjct: 291 NRLEKVSELLREMESGGNLPDITSYNVLLEAYAELGSIKEAMDVFRQMQAAGCVANAATY 350

Query: 675 MFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRESKRGLVDAVVDFLHKSGLKEEAGSVWE 734
             LL++        +VRD    FLEM  S + +   G  + ++    + G  +E  +++ 
Sbjct: 351 SVLLNLYGKHGRYDDVRD---IFLEMKVS-NTDPDAGTYNILIQVFGEGGYFKEVVTLFH 406

Query: 735 VAAQKNVYPDAVKEKGMSY 753
              ++NV P+    +G+ +
Sbjct: 407 DMVEENVEPNMETYEGLIF 425


>gi|297842227|ref|XP_002888995.1| hypothetical protein ARALYDRAFT_476621 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297334836|gb|EFH65254.1| hypothetical protein ARALYDRAFT_476621 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 863

 Score =  166 bits (420), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 99/354 (27%), Positives = 172/354 (48%), Gaps = 42/354 (11%)

Query: 339 DHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINK----------------- 381
           D   +L  F +++RQ   K +EH YT M+ +LGR    G ++K                 
Sbjct: 120 DWQRSLRLFKYMQRQIWCKPNEHIYTIMISLLGRE---GLLDKCLEVFDEMPSQGVSRSV 176

Query: 382 ---------------------LLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEAL-DVFK 419
                                LLD+M  D   P+++TYN +I++  R     E L  +F 
Sbjct: 177 FSYTALINAYGRNGRYETSLELLDRMKNDKISPSILTYNTVINACARGGLDWEGLLGLFA 236

Query: 420 QMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAG 479
           +M+  G +PD VTY TL+   A  G  D A  +++ M   G+ PD  TYS ++   GK  
Sbjct: 237 EMRHEGIQPDIVTYNTLLSACAIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLR 296

Query: 480 HLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYS 539
            L+    L  EM + G +P++ +YN+++   AK+ + + A+ ++  MQ AG  P+  TYS
Sbjct: 297 RLEKVSDLLSEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYS 356

Query: 540 IVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQA 599
           +++ + G  G  D+   +F EM+  N  PD   Y +L++++G+ G  ++    +  M++ 
Sbjct: 357 VLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEE 416

Query: 600 GLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEA 653
            + P++ T   ++ A  + G   DA  +LQ M    + PS + YT ++    +A
Sbjct: 417 NIEPDMETYEGIIFACGKGGLHEDARKILQYMTANDIVPSSKAYTGVIEAFGQA 470



 Score =  153 bits (386), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 127/537 (23%), Positives = 227/537 (42%), Gaps = 47/537 (8%)

Query: 354 AGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNE 413
            G   D  TY+ +V   G+ R+   ++ LL +M   G  P++ +YN L+ +Y ++  + E
Sbjct: 276 GGIVPDLTTYSHLVETFGKLRRLEKVSDLLSEMASGGSLPDITSYNVLLEAYAKSGSIKE 335

Query: 414 ALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIIN 473
           A+ VF QMQ  GC P+  TY  L+++  ++G  D    ++ +M+++   PD  TY+++I 
Sbjct: 336 AMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIE 395

Query: 474 CLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEP 533
             G+ G+ +    LF +MV +   P++ TY  +I    K   ++ A K+ + M      P
Sbjct: 396 VFGEGGYFKEVVTLFHDMVEENIEPDMETYEGIIFACGKGGLHEDARKILQYMTANDIVP 455

Query: 534 DKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWY 593
               Y+ V+E  G     +EA   F  M      P    Y  L+  + + G V+++    
Sbjct: 456 SSKAYTGVIEAFGQAALYEEALVAFNTMHEVGSNPSIETYHSLLYSFARGGLVKESEAIL 515

Query: 594 EAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEA 653
             ++ +G+  N  T N+ + A+ + G+  +A      M      P  +T   +LS  + A
Sbjct: 516 SRLVDSGIPRNRDTFNAQIEAYKQGGKFEEAVKTYVDMEKSRCDPDERTLEAVLSVYSFA 575

Query: 654 R-----------------SPYDMGFCHELMAVSGHPA--------------------HMF 676
           R                  P  M +C  ++AV G                       H  
Sbjct: 576 RLVDECREQFEEMKASDILPSIMCYCM-MLAVYGKTERWDDVNELLEEMLSNRVSNIHQV 634

Query: 677 LLSMPSPGPDGQNVRDHVGSFLEMMHSEDRESKRGLVDAVVDFLHKSGLKEEAGSVWEVA 736
           +  M     D  +    V   L+ ++SE         +A++D L   G KE A  V   A
Sbjct: 635 IGQMIKGDYDDDSNWQIVEYVLDKLNSEGCGLGIRFYNALLDALWWLGQKERAARVLNEA 694

Query: 737 AQKNVYPDAVKEKGMSYWLINLHVMSDGTAVIALSRTLAWFR--KQMLISGVGPSRIDIV 794
            ++ ++P+  ++  +  W +++H MS+G    ALS    W      ML++G    ++ +V
Sbjct: 695 TKRGLFPELFRKNKL-VWSVDVHRMSEGGMYTALS---VWLNDMNDMLLNGEDLPQLAVV 750

Query: 795 T---GWGRRSRVTGTSLVRQAVQELLHMFSFPFFTENGNSGCFVGCGEPLNKWLLQS 848
               G   +S     S + +A    L       F+  G +G  + C     K LL +
Sbjct: 751 VSVRGQLEKSSAARESSIAKAAFSFLQDHVSSSFSFTGWNGGRIMCQRSQLKQLLST 807



 Score =  152 bits (384), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 86/301 (28%), Positives = 158/301 (52%), Gaps = 3/301 (0%)

Query: 344 LGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDG-CQPNVVTYNRLI 402
           LG F  +R + G + D  TY T++      R  G   +++ + + DG   P++ TY+ L+
Sbjct: 232 LGLFAEMRHE-GIQPDIVTYNTLLSACA-IRGLGDEAEMVFRTMNDGGIVPDLTTYSHLV 289

Query: 403 HSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLS 462
            ++G+   L +  D+  +M   G  PD  +Y  L++ +AK+G +  AM ++ +MQAAG +
Sbjct: 290 ETFGKLRRLEKVSDLLSEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCT 349

Query: 463 PDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKL 522
           P+  TYSV++N  G++G      QLF EM +    P+  TYNI+I +  +   ++  + L
Sbjct: 350 PNANTYSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTL 409

Query: 523 YRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGK 582
           + DM     EPD  TY  ++   G  G  ++A  +   M   + VP    Y  +++ +G+
Sbjct: 410 FHDMVEENIEPDMETYEGIIFACGKGGLHEDARKILQYMTANDIVPSSKAYTGVIEAFGQ 469

Query: 583 AGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQT 642
           A    +A   +  M + G  P++ T +SLL +F R G + ++  +L  +++ G+  +  T
Sbjct: 470 AALYEEALVAFNTMHEVGSNPSIETYHSLLYSFARGGLVKESEAILSRLVDSGIPRNRDT 529

Query: 643 Y 643
           +
Sbjct: 530 F 530



 Score =  143 bits (360), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 83/287 (28%), Positives = 142/287 (49%), Gaps = 1/287 (0%)

Query: 362 TYTTMVGILGRA-RQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQ 420
           TY T++    R    +  +  L  +M  +G QP++VTYN L+ +       +EA  VF+ 
Sbjct: 213 TYNTVINACARGGLDWEGLLGLFAEMRHEGIQPDIVTYNTLLSACAIRGLGDEAEMVFRT 272

Query: 421 MQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGH 480
           M   G  PD  TY  L++   K   L+   D+  +M + G  PD  +Y+V++    K+G 
Sbjct: 273 MNDGGIVPDLTTYSHLVETFGKLRRLEKVSDLLSEMASGGSLPDITSYNVLLEAYAKSGS 332

Query: 481 LQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSI 540
           ++ A  +F +M   GC PN  TY++++ L  ++  Y    +L+ +M+++  +PD  TY+I
Sbjct: 333 IKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNI 392

Query: 541 VMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAG 600
           ++EV G  GY  E   +F +M  +N  PD   Y  ++   GK G    A +  + M    
Sbjct: 393 LIEVFGEGGYFKEVVTLFHDMVEENIEPDMETYEGIIFACGKGGLHEDARKILQYMTAND 452

Query: 601 LRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
           + P+      ++ AF +     +A      M  +G  PS++TY  LL
Sbjct: 453 IVPSSKAYTGVIEAFGQAALYEEALVAFNTMHEVGSNPSIETYHSLL 499



 Score = 94.0 bits (232), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 73/309 (23%), Positives = 143/309 (46%), Gaps = 6/309 (1%)

Query: 449 AMDMYKKMQ-AAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMI 507
           ++ ++K MQ      P+   Y+++I+ LG+ G L    ++F EM +QG   ++ +Y  +I
Sbjct: 124 SLRLFKYMQRQIWCKPNEHIYTIMISLLGREGLLDKCLEVFDEMPSQGVSRSVFSYTALI 183

Query: 508 ALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAE-AVFAEMRRKNW 566
               +   Y+++L+L   M+N    P  +TY+ V+      G   E    +FAEMR +  
Sbjct: 184 NAYGRNGRYETSLELLDRMKNDKISPSILTYNTVINACARGGLDWEGLLGLFAEMRHEGI 243

Query: 567 VPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYH 626
            PD   Y  L+      G   +A   +  M   G+ P++ T + L+  F ++ +L     
Sbjct: 244 QPDIVTYNTLLSACAIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLEKVSD 303

Query: 627 LLQGMLNLGLKPSLQTYTLLLSCCTEARSPYD-MGFCHELMAVSGHP-AHMFLLSMPSPG 684
           LL  M + G  P + +Y +LL    ++ S  + MG  H++ A    P A+ + + +   G
Sbjct: 304 LLSEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFG 363

Query: 685 PDGQNVRDHVGSFLEMMHSEDRESKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPD 744
             G+   D V      M S + +      + +++   + G  +E  +++    ++N+ PD
Sbjct: 364 QSGR--YDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPD 421

Query: 745 AVKEKGMSY 753
               +G+ +
Sbjct: 422 METYEGIIF 430


>gi|147857775|emb|CAN80799.1| hypothetical protein VITISV_019809 [Vitis vinifera]
          Length = 1099

 Score =  166 bits (420), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 125/429 (29%), Positives = 198/429 (46%), Gaps = 47/429 (10%)

Query: 362 TYTTMVGIL-GRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQ 420
           TYT ++  L G  R+  A+N L ++M   GC+PNV TY  LI    + N ++EA  +  +
Sbjct: 301 TYTVLIYALSGSGRKVEALN-LFNEMKEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSE 359

Query: 421 MQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGH 480
           M   G  P  VTY  LID + K G +D A ++   M++    P+T TY+ +I  L K   
Sbjct: 360 MSEKGLIPSVVTYNALIDGYCKEGMIDDAFEILDLMESNSCGPNTRTYNELICGLCKKRK 419

Query: 481 LQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSI 540
           +  A  L  +M+ +   P+L+TYN +I  Q K  + +SA +L   M   G  PD+ TYS+
Sbjct: 420 VHKAMALLNKMLERKLSPSLITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSV 479

Query: 541 VMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAG 600
            ++ L   G ++EA  +F  ++ K    +E +Y  L+D + K G +  A+   E ML   
Sbjct: 480 FIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDA 539

Query: 601 LRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMG 660
             PN  T N L+    +  ++ +A  L+  ML +G+KP++ TYT+L+          D  
Sbjct: 540 CLPNSYTYNVLIEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTILI-----GEMLKDGA 594

Query: 661 FCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRESKRGLVDAVVDFL 720
           F H L   +    HM  L      PD       V ++   +H+                 
Sbjct: 595 FDHALKVFN----HMVSLGYQ---PD-------VCTYTAFLHA----------------Y 624

Query: 721 HKSGLKEEAGSVWEVAAQKNVYPDAVKEKGMSYWLINLHVMSDGTAVIALSRTLAWFRKQ 780
              G+ EE   V     ++ + PD          L+   V+ DG A + L+     F K 
Sbjct: 625 FSQGMLEEVDDVIAKMNEEGILPD----------LVTYTVLIDGYARLGLTHRAFDFLKC 674

Query: 781 MLISGVGPS 789
           M+ +G  PS
Sbjct: 675 MVDTGCKPS 683



 Score =  153 bits (387), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 117/435 (26%), Positives = 203/435 (46%), Gaps = 31/435 (7%)

Query: 339 DHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGC------- 391
           D   AL FFNW+  + GFKH+ H+Y++M+ IL RAR  G   K+   M++  C       
Sbjct: 80  DPQTALSFFNWIALRPGFKHNVHSYSSMLNILIRARLLGVAEKIRISMIKSCCSIEDVLF 139

Query: 392 ----------------QPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCT 435
                           +P +  YN ++ S  +   ++E   V+ ++      P+  T+  
Sbjct: 140 VLEVFRKMNADGEFKFKPTLRCYNTILMSLSKFLLIDEMKTVYLELLNNQISPNIYTFNA 199

Query: 436 LIDIHAKAGFLDVAMDMY-KKMQAAGLSPDTFTYSVII--NCLGKAGHLQAAHQLFCEMV 492
           +++ + K G + V  ++Y  K+  AGL PDTFTY+ +I  +C  K   +  A+++F  M 
Sbjct: 200 MVNGYCKIGNV-VEAELYASKIVQAGLHPDTFTYTSLILGHCRNKG--VDNAYEVFLIMP 256

Query: 493 NQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLD 552
            +GC  N V+Y  +I    +A     ALKL+ DM      P   TY++++  L   G   
Sbjct: 257 QKGCQRNEVSYTNLIHGLCEAGRINEALKLFADMTEDNCCPTVRTYTVLIYALSGSGRKV 316

Query: 553 EAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLL 612
           EA  +F EM+ K   P+   Y +L+D   K   + +A +    M + GL P+V T N+L+
Sbjct: 317 EALNLFNEMKEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALI 376

Query: 613 SAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYT-LLLSCCTEARSPYDMGFCHELMAVSGH 671
             + + G + DA+ +L  M +    P+ +TY  L+   C + +    M   ++++     
Sbjct: 377 DGYCKEGMIDDAFEILDLMESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLERKLS 436

Query: 672 PAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRESKRGLVDAVVDFLHKSGLKEEAGS 731
           P+ +   S+   G    N  +     L +M+       +      +D L K G  EEAG+
Sbjct: 437 PSLITYNSLIH-GQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGT 495

Query: 732 VWEVAAQKNVYPDAV 746
           +++    K V  + V
Sbjct: 496 LFDSVKAKGVKANEV 510



 Score =  138 bits (348), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 81/286 (28%), Positives = 138/286 (48%)

Query: 362 TYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQM 421
           TY  ++  L + R+      LL++M+     P+++TYN LIH   + N L  A  +   M
Sbjct: 406 TYNELICGLCKKRKVHKAMALLNKMLERKLSPSLITYNSLIHGQCKVNDLESAYRLLSLM 465

Query: 422 QVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHL 481
              G  PD+ TY   ID   K G ++ A  ++  ++A G+  +   Y+ +I+   K G +
Sbjct: 466 NENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTALIDGYCKVGKI 525

Query: 482 QAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIV 541
             A+ L   M+N  C+PN  TYN++I    K +  + A  L   M   G +P  VTY+I+
Sbjct: 526 DVAYSLLERMLNDACLPNSYTYNVLIEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTIL 585

Query: 542 MEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGL 601
           +  +   G  D A  VF  M    + PD   Y   +  +   G + +  +    M + G+
Sbjct: 586 IGEMLKDGAFDHALKVFNHMVSLGYQPDVCTYTAFLHAYFSQGMLEEVDDVIAKMNEEGI 645

Query: 602 RPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
            P++ T   L+  + R+G    A+  L+ M++ G KPSL   ++L+
Sbjct: 646 LPDLVTYTVLIDGYARLGLTHRAFDFLKCMVDTGCKPSLYIVSILI 691



 Score =  136 bits (343), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 87/307 (28%), Positives = 152/307 (49%), Gaps = 5/307 (1%)

Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLI 402
           AL  FN ++ + G + + HTYT ++  L +  +     K+L +M   G  P+VVTYN LI
Sbjct: 318 ALNLFNEMKEK-GCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALI 376

Query: 403 HSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLS 462
             Y +   +++A ++   M+   C P+  TY  LI    K   +  AM +  KM    LS
Sbjct: 377 DGYCKEGMIDDAFEILDLMESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLERKLS 436

Query: 463 PDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKL 522
           P   TY+ +I+   K   L++A++L   M   G +P+  TY++ I    K    + A  L
Sbjct: 437 PSLITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTL 496

Query: 523 YRDMQNAGFEPDKVTYSIVMEVLGHC--GYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLW 580
           +  ++  G + ++V Y+ +++  G+C  G +D A ++   M     +P+   Y +L++  
Sbjct: 497 FDSVKAKGVKANEVIYTALID--GYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEGL 554

Query: 581 GKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSL 640
            K   +++A      ML  G++P V T   L+   L+ G    A  +   M++LG +P +
Sbjct: 555 CKEKKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKVFNHMVSLGYQPDV 614

Query: 641 QTYTLLL 647
            TYT  L
Sbjct: 615 CTYTAFL 621



 Score =  122 bits (307), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 82/303 (27%), Positives = 138/303 (45%), Gaps = 10/303 (3%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           +  G K +E  YT ++    +  +      LL++M+ D C PN  TYN LI    +   +
Sbjct: 501 KAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEGLCKEKKM 560

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
            EA  +  +M  +G +P  VTY  LI    K G  D A+ ++  M + G  PD  TY+  
Sbjct: 561 KEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKVFNHMVSLGYQPDVCTYTAF 620

Query: 472 INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF 531
           ++     G L+    +  +M  +G +P+LVTY ++I   A+      A    + M + G 
Sbjct: 621 LHAYFSQGMLEEVDDVIAKMNEEGILPDLVTYTVLIDGYARLGLTHRAFDFLKCMVDTGC 680

Query: 532 EPDKVTYSIVMEVLGHCGYLDE--AEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKA 589
           +P     SI+++ L H   + E  +E     +   N V        + D+W K      A
Sbjct: 681 KPSLYIVSILIKNLSHENRMKETRSEIGIDSVSNVNSVD-------IADVW-KTLEYEIA 732

Query: 590 WEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSC 649
            + +E M++ G   +V    +L++ F +  +L +A  L+  M   G+ PS   Y  LL C
Sbjct: 733 LKLFEKMVEHGCTIDVSIYGALIAGFCQQERLEEAQGLVHHMKERGMSPSEDIYNSLLDC 792

Query: 650 CTE 652
           C +
Sbjct: 793 CCK 795



 Score =  111 bits (277), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 79/306 (25%), Positives = 129/306 (42%), Gaps = 29/306 (9%)

Query: 359 DEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVF 418
           + +TY  ++  L + ++    + L+ +M+  G +P VVTY  LI    +    + AL VF
Sbjct: 543 NSYTYNVLIEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKVF 602

Query: 419 KQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKA 478
             M  +G +PD  TY   +  +   G L+   D+  KM   G+ PD  TY+V+I+   + 
Sbjct: 603 NHMVSLGYQPDVCTYTAFLHAYFSQGMLEEVDDVIAKMNEEGILPDLVTYTVLIDGYARL 662

Query: 479 GHLQAAHQLFCEMVNQGCIPNLVTYNIMI-----------------------------AL 509
           G    A      MV+ GC P+L   +I+I                             A 
Sbjct: 663 GLTHRAFDFLKCMVDTGCKPSLYIVSILIKNLSHENRMKETRSEIGIDSVSNVNSVDIAD 722

Query: 510 QAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPD 569
             K   Y+ ALKL+  M   G   D   Y  ++        L+EA+ +   M+ +   P 
Sbjct: 723 VWKTLEYEIALKLFEKMVEHGCTIDVSIYGALIAGFCQQERLEEAQGLVHHMKERGMSPS 782

Query: 570 EPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQ 629
           E +Y  L+D   K G   +A    +AM++ GL P + +   L+      G    A  +  
Sbjct: 783 EDIYNSLLDCCCKLGVYAEAVRLVDAMVENGLLPLLESYKLLVCGLYIEGSNEKAKAVFH 842

Query: 630 GMLNLG 635
           G+L+ G
Sbjct: 843 GLLSCG 848



 Score = 70.5 bits (171), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 70/287 (24%), Positives = 116/287 (40%), Gaps = 32/287 (11%)

Query: 339 DHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTY 398
           DH  AL  FN +    G++ D  TYT  +           ++ ++ +M  +G  P++VTY
Sbjct: 596 DH--ALKVFNHMV-SLGYQPDVCTYTAFLHAYFSQGMLEEVDDVIAKMNEEGILPDLVTY 652

Query: 399 NRLIHSYGRANYLNEALDVFKQMQVVGCEP---------------------------DRV 431
             LI  Y R    + A D  K M   GC+P                           D V
Sbjct: 653 TVLIDGYARLGLTHRAFDFLKCMVDTGCKPSLYIVSILIKNLSHENRMKETRSEIGIDSV 712

Query: 432 TYCTLIDIHA--KAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFC 489
           +    +DI    K    ++A+ +++KM   G + D   Y  +I    +   L+ A  L  
Sbjct: 713 SNVNSVDIADVWKTLEYEIALKLFEKMVEHGCTIDVSIYGALIAGFCQQERLEEAQGLVH 772

Query: 490 EMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCG 549
            M  +G  P+   YN ++    K   Y  A++L   M   G  P   +Y +++  L   G
Sbjct: 773 HMKERGMSPSEDIYNSLLDCCCKLGVYAEAVRLVDAMVENGLLPLLESYKLLVCGLYIEG 832

Query: 550 YLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAM 596
             ++A+AVF  +    +  DE  + +L+D   K   V +  E  + M
Sbjct: 833 SNEKAKAVFHGLLSCGYNYDEVAWKVLIDGLLKRDLVDECSELIDIM 879



 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 60/276 (21%), Positives = 111/276 (40%), Gaps = 48/276 (17%)

Query: 325 MDAYQANQVLKQLQDHTVALGFFNWLRRQAGFKHDEHTYTTMV------GILGRARQFGA 378
           + AY +  +L+++ D    +        + G   D  TYT ++      G+  RA  F  
Sbjct: 621 LHAYFSQGMLEEVDDVIAKMN-------EEGILPDLVTYTVLIDGYARLGLTHRAFDF-- 671

Query: 379 INKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNE------------------------- 413
               L  MV  GC+P++   + LI +    N + E                         
Sbjct: 672 ----LKCMVDTGCKPSLYIVSILIKNLSHENRMKETRSEIGIDSVSNVNSVDIADVWKTL 727

Query: 414 ----ALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYS 469
               AL +F++M   GC  D   Y  LI    +   L+ A  +   M+  G+SP    Y+
Sbjct: 728 EYEIALKLFEKMVEHGCTIDVSIYGALIAGFCQQERLEEAQGLVHHMKERGMSPSEDIYN 787

Query: 470 VIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNA 529
            +++C  K G    A +L   MV  G +P L +Y +++       + + A  ++  + + 
Sbjct: 788 SLLDCCCKLGVYAEAVRLVDAMVENGLLPLLESYKLLVCGLYIEGSNEKAKAVFHGLLSC 847

Query: 530 GFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKN 565
           G+  D+V + ++++ L     +DE   +   M  K+
Sbjct: 848 GYNYDEVAWKVLIDGLLKRDLVDECSELIDIMEEKD 883


>gi|225430498|ref|XP_002283327.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
           chloroplastic [Vitis vinifera]
 gi|296082142|emb|CBI21147.3| unnamed protein product [Vitis vinifera]
          Length = 1113

 Score =  166 bits (420), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 103/344 (29%), Positives = 160/344 (46%), Gaps = 2/344 (0%)

Query: 312 PLAEEALGNTNYSMDAYQANQVLKQLQDHTVALGFFNWLRRQA--GFKHDEHTYTTMVGI 369
           P+A E +    + ++ Y    ++  L             RR    G K    TY+ ++  
Sbjct: 177 PVALEKMRKVGFVLNGYSYIGLIHLLLKSGFCREALKVYRRMVSEGIKPSLKTYSALMVA 236

Query: 370 LGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPD 429
           LG+ R    +  LL +M   G +PN+ T+   I   GRA  ++EA  + K+M   GC PD
Sbjct: 237 LGKRRDIETVMGLLQEMESLGLRPNIYTFTICIRILGRAGKIDEAYGILKRMDDAGCGPD 296

Query: 430 RVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFC 489
            VTY  LID    AG L+ A +++ KM+A+   PD  TY  +++     G L A  + + 
Sbjct: 297 VVTYTVLIDALCNAGKLNNAKELFLKMKASSHKPDRVTYITLLDKFSDHGDLDAIKEFWS 356

Query: 490 EMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCG 549
           EM   G +P++VT+ I+I    K      A      M+  G  P+  TY+ ++  L    
Sbjct: 357 EMEADGYLPDVVTFTILIDALCKVGKVDEAFGTLDVMKKQGVAPNLHTYNTLICGLLRLN 416

Query: 550 YLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCN 609
            LDEA  +F  M           Y L +D +GK+G   KA + +E M   G+ PN+  CN
Sbjct: 417 RLDEALELFNSMESLGLETTAYTYILFIDYYGKSGESGKAIKTFEKMKTNGIVPNIVACN 476

Query: 610 SLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEA 653
           + L +    G+L +A     G+   GL P   TY +L+ C  +A
Sbjct: 477 ASLYSLAEQGRLEEAKEFFNGLKKCGLAPDAITYNILMRCYGKA 520



 Score =  160 bits (404), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 87/287 (30%), Positives = 156/287 (54%)

Query: 361  HTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQ 420
              Y +++  L +AR       L  +M   GC P+V TYN  + + G++  + E  D++++
Sbjct: 789  EAYNSLIDGLLKARLTEMAWGLFYKMKNAGCTPDVFTYNLFLDALGKSGKIKELFDLYEE 848

Query: 421  MQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGH 480
            M   GC+P+ +T+  +I    K+  LD A+D+Y  + +   SP  +TY  +I+ L K G 
Sbjct: 849  MLFRGCKPNTITHNIVIFGLVKSNSLDKAIDLYYDLMSGDFSPTPWTYGPLIDGLLKLGR 908

Query: 481  LQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSI 540
            L+ A Q F EM++ GC+PN   YNI++    K  + ++A +L+R M   G  PD  +YSI
Sbjct: 909  LEEAKQFFEEMLDYGCMPNCPLYNILMNGFGKQGDVETACELFRRMVKEGIRPDLKSYSI 968

Query: 541  VMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAG 600
            +++ L   G +D+A   F E++     PD   Y L+++  G++  V +A   ++ M   G
Sbjct: 969  MVDCLCMVGKVDDALHYFEELKLSGLDPDLVCYNLMINGLGRSQRVEEALSLFDEMRNRG 1028

Query: 601  LRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
            + P++ T N+L+      G + +A  + + +   GL+P++ TY  L+
Sbjct: 1029 ITPDLYTYNALILNLGIAGMVEEAGKMYEELQLKGLEPNVFTYNALI 1075



 Score =  157 bits (398), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 105/365 (28%), Positives = 184/365 (50%), Gaps = 12/365 (3%)

Query: 284  LAPFSRHFASTGNVVESVSRILRQWKWGPLAEEALGNTNYSMDAYQA--NQVLKQLQDHT 341
            L P  +     G  V++ +  L+  K   +          S++AY +  + +LK  +   
Sbjct: 755  LIPLVKFLCKHGKAVDAYNVFLKLTKSFCITP--------SLEAYNSLIDGLLKA-RLTE 805

Query: 342  VALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRL 401
            +A G F +  + AG   D  TY   +  LG++ +   +  L ++M+  GC+PN +T+N +
Sbjct: 806  MAWGLF-YKMKNAGCTPDVFTYNLFLDALGKSGKIKELFDLYEEMLFRGCKPNTITHNIV 864

Query: 402  IHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGL 461
            I    ++N L++A+D++  +      P   TY  LID   K G L+ A   +++M   G 
Sbjct: 865  IFGLVKSNSLDKAIDLYYDLMSGDFSPTPWTYGPLIDGLLKLGRLEEAKQFFEEMLDYGC 924

Query: 462  SPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALK 521
             P+   Y++++N  GK G ++ A +LF  MV +G  P+L +Y+IM+           AL 
Sbjct: 925  MPNCPLYNILMNGFGKQGDVETACELFRRMVKEGIRPDLKSYSIMVDCLCMVGKVDDALH 984

Query: 522  LYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWG 581
             + +++ +G +PD V Y++++  LG    ++EA ++F EMR +   PD   Y  L+   G
Sbjct: 985  YFEELKLSGLDPDLVCYNLMINGLGRSQRVEEALSLFDEMRNRGITPDLYTYNALILNLG 1044

Query: 582  KAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQ 641
             AG V +A + YE +   GL PNV T N+L+      G    AY + + M+  G +P+  
Sbjct: 1045 IAGMVEEAGKMYEELQLKGLEPNVFTYNALIRGHSMSGNPDRAYAVYKKMMVGGCRPNTG 1104

Query: 642  TYTLL 646
            T+  L
Sbjct: 1105 TFAQL 1109



 Score =  148 bits (374), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 78/237 (32%), Positives = 137/237 (57%), Gaps = 1/237 (0%)

Query: 413  EALDVFKQMQVVGC-EPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
            +A +VF ++    C  P    Y +LID   KA   ++A  ++ KM+ AG +PD FTY++ 
Sbjct: 770  DAYNVFLKLTKSFCITPSLEAYNSLIDGLLKARLTEMAWGLFYKMKNAGCTPDVFTYNLF 829

Query: 472  INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF 531
            ++ LGK+G ++    L+ EM+ +GC PN +T+NI+I    K+ +   A+ LY D+ +  F
Sbjct: 830  LDALGKSGKIKELFDLYEEMLFRGCKPNTITHNIVIFGLVKSNSLDKAIDLYYDLMSGDF 889

Query: 532  EPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWE 591
             P   TY  +++ L   G L+EA+  F EM     +P+ P+Y +L++ +GK G+V  A E
Sbjct: 890  SPTPWTYGPLIDGLLKLGRLEEAKQFFEEMLDYGCMPNCPLYNILMNGFGKQGDVETACE 949

Query: 592  WYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
             +  M++ G+RP++ + + ++     VG++ DA H  + +   GL P L  Y L+++
Sbjct: 950  LFRRMVKEGIRPDLKSYSIMVDCLCMVGKVDDALHYFEELKLSGLDPDLVCYNLMIN 1006



 Score =  146 bits (369), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 86/293 (29%), Positives = 146/293 (49%)

Query: 357 KHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALD 416
           K D  TY T++          AI +   +M  DG  P+VVT+  LI +  +   ++EA  
Sbjct: 329 KPDRVTYITLLDKFSDHGDLDAIKEFWSEMEADGYLPDVVTFTILIDALCKVGKVDEAFG 388

Query: 417 VFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLG 476
               M+  G  P+  TY TLI    +   LD A++++  M++ GL    +TY + I+  G
Sbjct: 389 TLDVMKKQGVAPNLHTYNTLICGLLRLNRLDEALELFNSMESLGLETTAYTYILFIDYYG 448

Query: 477 KAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKV 536
           K+G    A + F +M   G +PN+V  N  +   A+    + A + +  ++  G  PD +
Sbjct: 449 KSGESGKAIKTFEKMKTNGIVPNIVACNASLYSLAEQGRLEEAKEFFNGLKKCGLAPDAI 508

Query: 537 TYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAM 596
           TY+I+M   G  G +D+A  + +EM      P+  +   L+D   KA  V +AW+ ++ M
Sbjct: 509 TYNILMRCYGKAGRVDDAIKLLSEMEENGCDPEVVIINSLIDTLYKADRVDEAWKMFQRM 568

Query: 597 LQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSC 649
            +  L P V T N+LL+   + G++ +A  L +GM+     P+  ++  LL C
Sbjct: 569 KEMKLAPTVVTYNTLLAGLGKEGRVQEATALFKGMIADDCPPNTISFNTLLDC 621



 Score =  145 bits (367), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 97/343 (28%), Positives = 165/343 (48%), Gaps = 4/343 (1%)

Query: 349 WLRRQA-GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGR 407
           W   +A G+  D  T+T ++  L +  +       LD M + G  PN+ TYN LI    R
Sbjct: 355 WSEMEADGYLPDVVTFTILIDALCKVGKVDEAFGTLDVMKKQGVAPNLHTYNTLICGLLR 414

Query: 408 ANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFT 467
            N L+EAL++F  M+ +G E    TY   ID + K+G    A+  ++KM+  G+ P+   
Sbjct: 415 LNRLDEALELFNSMESLGLETTAYTYILFIDYYGKSGESGKAIKTFEKMKTNGIVPNIVA 474

Query: 468 YSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQ 527
            +  +  L + G L+ A + F  +   G  P+ +TYNI++    KA     A+KL  +M+
Sbjct: 475 CNASLYSLAEQGRLEEAKEFFNGLKKCGLAPDAITYNILMRCYGKAGRVDDAIKLLSEME 534

Query: 528 NAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVR 587
             G +P+ V  + +++ L     +DEA  +F  M+     P    Y  L+   GK G V+
Sbjct: 535 ENGCDPEVVIINSLIDTLYKADRVDEAWKMFQRMKEMKLAPTVVTYNTLLAGLGKEGRVQ 594

Query: 588 KAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTY-TLL 646
           +A   ++ M+     PN  + N+LL    + G++  A  +L  M  +   P + TY T++
Sbjct: 595 EATALFKGMIADDCPPNTISFNTLLDCLCKNGEVDLALKMLFRMTEMNCFPDVLTYNTVI 654

Query: 647 LSCCTEARSPYDMGFCHELMAVSGHPAHMFLLS-MPSPGPDGQ 688
                E R  Y     H++  V  +P ++ L + +P    DG+
Sbjct: 655 YGLIKENRVNYAFWLFHQMKKVI-YPDYVTLCTLLPGVIKDGR 696



 Score =  138 bits (348), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 89/324 (27%), Positives = 160/324 (49%)

Query: 324 SMDAYQANQVLKQLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLL 383
           +M + +  +VLK + D   A  FFN +       H   T   ++ +L   R+   +  + 
Sbjct: 86  TMSSEEVYRVLKSISDPNQAFSFFNSVAEMPRVIHTTETCNYVLEMLRAHRRVEDMVVVF 145

Query: 384 DQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKA 443
           + M +   + ++ TY  +         L EA    ++M+ VG   +  +Y  LI +  K+
Sbjct: 146 NLMQKQIIKRSINTYLTIFKVLYIRGGLREAPVALEKMRKVGFVLNGYSYIGLIHLLLKS 205

Query: 444 GFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTY 503
           GF   A+ +Y++M + G+ P   TYS ++  LGK   ++    L  EM + G  PN+ T+
Sbjct: 206 GFCREALKVYRRMVSEGIKPSLKTYSALMVALGKRRDIETVMGLLQEMESLGLRPNIYTF 265

Query: 504 NIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRR 563
            I I +  +A     A  + + M +AG  PD VTY+++++ L + G L+ A+ +F +M+ 
Sbjct: 266 TICIRILGRAGKIDEAYGILKRMDDAGCGPDVVTYTVLIDALCNAGKLNNAKELFLKMKA 325

Query: 564 KNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSD 623
            +  PD   Y  L+D +   G++    E++  M   G  P+V T   L+ A  +VG++ +
Sbjct: 326 SSHKPDRVTYITLLDKFSDHGDLDAIKEFWSEMEADGYLPDVVTFTILIDALCKVGKVDE 385

Query: 624 AYHLLQGMLNLGLKPSLQTYTLLL 647
           A+  L  M   G+ P+L TY  L+
Sbjct: 386 AFGTLDVMKKQGVAPNLHTYNTLI 409



 Score =  123 bits (308), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 125/507 (24%), Positives = 213/507 (42%), Gaps = 97/507 (19%)

Query: 362  TYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQM 421
            ++ T++  L +  +     K+L +M    C P+V+TYN +I+   + N +N A  +F QM
Sbjct: 614  SFNTLLDCLCKNGEVDLALKMLFRMTEMNCFPDVLTYNTVIYGLIKENRVNYAFWLFHQM 673

Query: 422  QVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKK----------------------MQAA 459
            + V   PD VT CTL+    K G ++ A  + K+                      ++A 
Sbjct: 674  KKV-IYPDYVTLCTLLPGVIKDGRIEDAFRVAKEFVHHVGDHADGSFWEDLMGGILIEAE 732

Query: 460  GLSPDTFTYSVIINC--------------LGKAGHLQAAHQLFCEMVNQGCI-PNLVTYN 504
                  F  S++ N               L K G    A+ +F ++    CI P+L  YN
Sbjct: 733  IGQSILFAESLVCNTICEDDSVLIPLVKFLCKHGKAVDAYNVFLKLTKSFCITPSLEAYN 792

Query: 505  IMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGY-------------- 550
             +I    KAR  + A  L+  M+NAG  PD  TY++ ++ LG  G               
Sbjct: 793  SLIDGLLKARLTEMAWGLFYKMKNAGCTPDVFTYNLFLDALGKSGKIKELFDLYEEMLFR 852

Query: 551  ---------------------LDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKA 589
                                 LD+A  ++ ++   ++ P    YG L+D   K G + +A
Sbjct: 853  GCKPNTITHNIVIFGLVKSNSLDKAIDLYYDLMSGDFSPTPWTYGPLIDGLLKLGRLEEA 912

Query: 590  WEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSC 649
             +++E ML  G  PN P  N L++ F + G +  A  L + M+  G++P L++Y++++ C
Sbjct: 913  KQFFEEMLDYGCMPNCPLYNILMNGFGKQGDVETACELFRRMVKEGIRPDLKSYSIMVDC 972

Query: 650  CTEARSPYDMGFCHELMAVSGHPAHMFLLSMPSPGPD-GQNVRDHVGSFLEMMHSEDRES 708
                    D     E + +SG    +   ++   G    Q V + +  F EM +      
Sbjct: 973  LCMVGKVDDALHYFEELKLSGLDPDLVCYNLMINGLGRSQRVEEALSLFDEMRN------ 1026

Query: 709  KRGLV------DAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAVKEKGMSYWLINLHVMS 762
             RG+       +A++  L  +G+ EEAG ++E    K + P+          LI  H MS
Sbjct: 1027 -RGITPDLYTYNALILNLGIAGMVEEAGKMYEELQLKGLEPNVFTYNA----LIRGHSMS 1081

Query: 763  DGTAVIALSRTLAWFRKQMLISGVGPS 789
                     R  A ++K M++ G  P+
Sbjct: 1082 GNP-----DRAYAVYKK-MMVGGCRPN 1102



 Score = 76.3 bits (186), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 46/131 (35%), Positives = 72/131 (54%), Gaps = 1/131 (0%)

Query: 343  ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLI 402
            AL +F  L+  +G   D   Y  M+  LGR+++      L D+M   G  P++ TYN LI
Sbjct: 982  ALHYFEELK-LSGLDPDLVCYNLMINGLGRSQRVEEALSLFDEMRNRGITPDLYTYNALI 1040

Query: 403  HSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLS 462
             + G A  + EA  +++++Q+ G EP+  TY  LI  H+ +G  D A  +YKKM   G  
Sbjct: 1041 LNLGIAGMVEEAGKMYEELQLKGLEPNVFTYNALIRGHSMSGNPDRAYAVYKKMMVGGCR 1100

Query: 463  PDTFTYSVIIN 473
            P+T T++ + N
Sbjct: 1101 PNTGTFAQLPN 1111


>gi|302769103|ref|XP_002967971.1| hypothetical protein SELMODRAFT_145138 [Selaginella moellendorffii]
 gi|300164709|gb|EFJ31318.1| hypothetical protein SELMODRAFT_145138 [Selaginella moellendorffii]
          Length = 1354

 Score =  166 bits (420), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 86/294 (29%), Positives = 158/294 (53%), Gaps = 1/294 (0%)

Query: 355 GFKHDEHTYTTMVGILGRA-RQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNE 413
           G + D  T+  ++    R   Q G  + LL  +   G +P+ +TYN LI +    N L++
Sbjct: 144 GCRPDLVTFNIVIKARTRGGMQEGLASSLLQDVYAAGLRPDTITYNTLISACSLNNRLSD 203

Query: 414 ALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIIN 473
           A+ +F++MQ  GC+PD  TY  +I ++ +AG ++ A  +++ MQ  G +PD  TY+ +++
Sbjct: 204 AILIFEEMQRQGCDPDIWTYNAMISVYGRAGRVEAASSIFRIMQEQGFTPDAVTYNSVLH 263

Query: 474 CLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEP 533
              + G ++   ++   M +  C  + +TYN MI +  KA  ++ A +LY  M+  G  P
Sbjct: 264 AFARDGRIEEVERIRGMMRDARCSSDEITYNTMIHMYGKAGMHRKAEELYVQMKEEGRCP 323

Query: 534 DKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWY 593
           D VT++++++ LG  G+++EA A+F +M +    P    +  ++  + KA     A   Y
Sbjct: 324 DSVTFTVLIDTLGKAGFVNEAAAMFEDMLKSQVRPTLQAFSAMICAYAKADMFSDAEHTY 383

Query: 594 EAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
             ML+AG+RP++   + +L  F +         L + M+  GLKP L  Y +++
Sbjct: 384 SCMLRAGVRPDLLAYSVMLDVFFKAEMPEKCIILYKAMVGSGLKPELSVYAIMV 437



 Score =  164 bits (414), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 90/312 (28%), Positives = 168/312 (53%), Gaps = 3/312 (0%)

Query: 361 HTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEAL--DVF 418
             Y +++ +  R   + ++ +LL +M   GC+P++VT+N +I +  R   + E L   + 
Sbjct: 115 QVYNSLMSVYARHGDWNSVQQLLCRMQDRGCRPDLVTFNIVIKARTRGG-MQEGLASSLL 173

Query: 419 KQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKA 478
           + +   G  PD +TY TLI   +    L  A+ ++++MQ  G  PD +TY+ +I+  G+A
Sbjct: 174 QDVYAAGLRPDTITYNTLISACSLNNRLSDAILIFEEMQRQGCDPDIWTYNAMISVYGRA 233

Query: 479 GHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTY 538
           G ++AA  +F  M  QG  P+ VTYN ++   A+    +   ++   M++A    D++TY
Sbjct: 234 GRVEAASSIFRIMQEQGFTPDAVTYNSVLHAFARDGRIEEVERIRGMMRDARCSSDEITY 293

Query: 539 SIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQ 598
           + ++ + G  G   +AE ++ +M+ +   PD   + +L+D  GKAG V +A   +E ML+
Sbjct: 294 NTMIHMYGKAGMHRKAEELYVQMKEEGRCPDSVTFTVLIDTLGKAGFVNEAAAMFEDMLK 353

Query: 599 AGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYD 658
           + +RP +   ++++ A+ +    SDA H    ML  G++P L  Y+++L    +A  P  
Sbjct: 354 SQVRPTLQAFSAMICAYAKADMFSDAEHTYSCMLRAGVRPDLLAYSVMLDVFFKAEMPEK 413

Query: 659 MGFCHELMAVSG 670
               ++ M  SG
Sbjct: 414 CIILYKAMVGSG 425



 Score =  145 bits (367), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 129/569 (22%), Positives = 222/569 (39%), Gaps = 72/569 (12%)

Query: 347  FNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYG 406
            F  L+R  GF  +   Y+ ++        F    + LD MV  G QPN    N ++ ++G
Sbjct: 658  FRDLQRH-GFAGNTSAYSALLSAYAETGNFERATRALDNMVAAGLQPNAACANYVLEAFG 716

Query: 407  RANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSP--- 463
            RA    E  + ++++  +G  P+  T+  +    ++ G L+ A  MY++M+ AG SP   
Sbjct: 717  RAGKAKELSEFYQRLPEMGITPNSRTFVVIFHAFSRNGNLEEARSMYRQMREAGFSPSIQ 776

Query: 464  --------------------------------DTFTYSVIINCLGKAGHLQAAHQLFCEM 491
                                            D   Y+ +I+   K G  + A  +F  M
Sbjct: 777  VFKALLALYSRETVEIDAEELVKDIKKAGLELDMDIYNHMISLYSKLGSYRKAALVFKGM 836

Query: 492  VNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYL 551
               GC P+  T+N +I L ++ +  Q A  L R+M   G  P+  TY+ ++   G     
Sbjct: 837  QEIGCSPDATTFNTLIMLYSRNQMVQEAQALLREMIKTGNAPNISTYTTLISAYGRLQAY 896

Query: 552  DEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSL 611
            ++AE VF  +      PD   Y ++++++ KAG  RK  E  E M   G  P++ T + L
Sbjct: 897  EDAELVFKSIAETGCKPDATAYNVMINVYRKAGEHRKIEEVIEQMKADGFEPSLTTIHML 956

Query: 612  LSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYT--------------------------- 644
            + ++ + G    A  +L+ +  +G+ P    YT                           
Sbjct: 957  MDSYGKGGATGKAEEVLETLPEIGMSPDAIHYTSIINSHLNNKDYLSAVIWLRKMTDACV 1016

Query: 645  ----LLLSCCTEARSPYDMGFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEM 700
                + ++C   A S  +    H LM +       F L +         V   +    + 
Sbjct: 1017 RPTHVTITCFVGAASVCERS-SHALMLLKALSEAGFSLPLRLMTECTPKVVQDMQDIFDQ 1075

Query: 701  MHSEDRESKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAVKEKGMSYWLINLHV 760
            +     E+ +G+V+ ++D L        A  V+ VA + N+Y   +       W  +   
Sbjct: 1076 LQESGPEACQGVVNVLMDLLWAFRQCATAALVFAVAIESNIYTQVLARVKDRNWGADFRR 1135

Query: 761  MSDGTAVIALSRTLAWFRKQMLI-SGVGPSRIDIVTGWGRRSRVTGTSLVRQAVQELLHM 819
            +S G A++AL   L   +   L  S V P  I I  G    S++   + V   ++  L  
Sbjct: 1136 LSPGAALVALILWLDQMQDASLQGSPVPPKSIQIDIG---SSKLNNQASVSNTIKTHLWQ 1192

Query: 820  FSFPFFTENGNSGCFVGCGEPLNKWLLQS 848
               PF      +G  V     L  WL +S
Sbjct: 1193 MGSPFLPSKTRAGVLVAKSHALCMWLKES 1221



 Score =  135 bits (339), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 89/331 (26%), Positives = 156/331 (47%), Gaps = 33/331 (9%)

Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLI 402
           A+  F  ++RQ G   D  TY  M+ + GRA +  A + +   M   G  P+ VTYN ++
Sbjct: 204 AILIFEEMQRQ-GCDPDIWTYNAMISVYGRAGRVEAASSIFRIMQEQGFTPDAVTYNSVL 262

Query: 403 HSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLS 462
           H++ R   + E   +   M+   C  D +TY T+I ++ KAG    A ++Y +M+  G  
Sbjct: 263 HAFARDGRIEEVERIRGMMRDARCSSDEITYNTMIHMYGKAGMHRKAEELYVQMKEEGRC 322

Query: 463 PDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKL 522
           PD+ T++V+I+ LGKAG +  A  +F +M+     P L  ++ MI   AKA  +  A   
Sbjct: 323 PDSVTFTVLIDTLGKAGFVNEAAAMFEDMLKSQVRPTLQAFSAMICAYAKADMFSDAEHT 382

Query: 523 YRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGK 582
           Y  M  AG  PD + YS++++V       ++   ++  M      P+  VY ++V ++ +
Sbjct: 383 YSCMLRAGVRPDLLAYSVMLDVFFKAEMPEKCIILYKAMVGSGLKPELSVYAIMVRVFYQ 442

Query: 583 AGNVRKAWEWYEAMLQA------------------------------GLRPNVPTCNSLL 612
             ++ +     + M+Q+                              G+   V T N +L
Sbjct: 443 KSSLAEIENLSKEMVQSSASLAALSSTLAKGGFYAEAAVVLKISFAQGVAVKVETLNDVL 502

Query: 613 SAFLRVGQLSDAYHLLQGMLNLGLKPSLQTY 643
            AF   G+LSDA  L+  + +  ++PS+  +
Sbjct: 503 GAFEASGKLSDARDLVHAVSS--IEPSVAAH 531



 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 78/280 (27%), Positives = 138/280 (49%)

Query: 354 AGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNE 413
           AG + D  TY T++       +      + ++M R GC P++ TYN +I  YGRA  +  
Sbjct: 179 AGLRPDTITYNTLISACSLNNRLSDAILIFEEMQRQGCDPDIWTYNAMISVYGRAGRVEA 238

Query: 414 ALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIIN 473
           A  +F+ MQ  G  PD VTY +++   A+ G ++    +   M+ A  S D  TY+ +I+
Sbjct: 239 ASSIFRIMQEQGFTPDAVTYNSVLHAFARDGRIEEVERIRGMMRDARCSSDEITYNTMIH 298

Query: 474 CLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEP 533
             GKAG  + A +L+ +M  +G  P+ VT+ ++I    KA     A  ++ DM  +   P
Sbjct: 299 MYGKAGMHRKAEELYVQMKEEGRCPDSVTFTVLIDTLGKAGFVNEAAAMFEDMLKSQVRP 358

Query: 534 DKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWY 593
               +S ++          +AE  ++ M R    PD   Y +++D++ KA    K    Y
Sbjct: 359 TLQAFSAMICAYAKADMFSDAEHTYSCMLRAGVRPDLLAYSVMLDVFFKAEMPEKCIILY 418

Query: 594 EAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLN 633
           +AM+ +GL+P +     ++  F +   L++  +L + M+ 
Sbjct: 419 KAMVGSGLKPELSVYAIMVRVFYQKSSLAEIENLSKEMVQ 458



 Score =  119 bits (297), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 101/433 (23%), Positives = 192/433 (44%), Gaps = 27/433 (6%)

Query: 401  LIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAG 460
            +I SYG+      A  VF+ +Q  G   +   Y  L+  +A+ G  + A      M AAG
Sbjct: 641  IIASYGKLKLWQNAEIVFRDLQRHGFAGNTSAYSALLSAYAETGNFERATRALDNMVAAG 700

Query: 461  LSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSAL 520
            L P+    + ++   G+AG  +   + +  +   G  PN  T+ ++    ++  N + A 
Sbjct: 701  LQPNAACANYVLEAFGRAGKAKELSEFYQRLPEMGITPNSRTFVVIFHAFSRNGNLEEAR 760

Query: 521  KLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLW 580
             +YR M+ AGF P    +  ++ +        +AE +  ++++     D  +Y  ++ L+
Sbjct: 761  SMYRQMREAGFSPSIQVFKALLALYSRETVEIDAEELVKDIKKAGLELDMDIYNHMISLY 820

Query: 581  GKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSL 640
             K G+ RKA   ++ M + G  P+  T N+L+  + R   + +A  LL+ M+  G  P++
Sbjct: 821  SKLGSYRKAALVFKGMQEIGCSPDATTFNTLIMLYSRNQMVQEAQALLREMIKTGNAPNI 880

Query: 641  QTYTLLLSCCTEARSPYDMGFCHELMAVSG----HPAHMFLLSMPSPGPDGQNVRDHVGS 696
             TYT L+S     ++  D     + +A +G      A+  ++++     + + + +    
Sbjct: 881  STYTTLISAYGRLQAYEDAELVFKSIAETGCKPDATAYNVMINVYRKAGEHRKIEE---- 936

Query: 697  FLEMMHSEDRESKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAVKEKGMSYWLI 756
             +E M ++  E     +  ++D   K G   +A  V E   +  + PDA+        +I
Sbjct: 937  VIEQMKADGFEPSLTTIHMLMDSYGKGGATGKAEEVLETLPEIGMSPDAIHYTS----II 992

Query: 757  NLHVMSDG--TAVIALSRTLAWFRKQMLISGVGPSRIDIVTGWGRRS---RVTGTSLVRQ 811
            N H+ +    +AVI       W RK M  + V P+ + I    G  S   R +   ++ +
Sbjct: 993  NSHLNNKDYLSAVI-------WLRK-MTDACVRPTHVTITCFVGAASVCERSSHALMLLK 1044

Query: 812  AVQELLHMFSFPF 824
            A+ E    FS P 
Sbjct: 1045 ALSE--AGFSLPL 1055



 Score =  107 bits (268), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 72/335 (21%), Positives = 147/335 (43%), Gaps = 5/335 (1%)

Query: 359 DEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVF 418
           D   +  ++   G+ + +     +   + R G   N   Y+ L+ +Y        A    
Sbjct: 634 DSAMHVAIIASYGKLKLWQNAEIVFRDLQRHGFAGNTSAYSALLSAYAETGNFERATRAL 693

Query: 419 KQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKA 478
             M   G +P+      +++   +AG      + Y+++   G++P++ T+ VI +   + 
Sbjct: 694 DNMVAAGLQPNAACANYVLEAFGRAGKAKELSEFYQRLPEMGITPNSRTFVVIFHAFSRN 753

Query: 479 GHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTY 538
           G+L+ A  ++ +M   G  P++  +  ++AL ++      A +L +D++ AG E D   Y
Sbjct: 754 GNLEEARSMYRQMREAGFSPSIQVFKALLALYSRETVEIDAEELVKDIKKAGLELDMDIY 813

Query: 539 SIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQ 598
           + ++ +    G   +A  VF  M+     PD   +  L+ L+ +   V++A      M++
Sbjct: 814 NHMISLYSKLGSYRKAALVFKGMQEIGCSPDATTFNTLIMLYSRNQMVQEAQALLREMIK 873

Query: 599 AGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYD 658
            G  PN+ T  +L+SA+ R+    DA  + + +   G KP    Y ++++   +A     
Sbjct: 874 TGNAPNISTYTTLISAYGRLQAYEDAELVFKSIAETGCKPDATAYNVMINVYRKAGEHRK 933

Query: 659 MGFCHELMAVSG-HPA----HMFLLSMPSPGPDGQ 688
           +    E M   G  P+    HM + S    G  G+
Sbjct: 934 IEEVIEQMKADGFEPSLTTIHMLMDSYGKGGATGK 968



 Score = 90.1 bits (222), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 69/289 (23%), Positives = 125/289 (43%), Gaps = 2/289 (0%)

Query: 361 HTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNR-LIHSYGRANYLNEALDVFK 419
           H Y  +  +L +A +F    + +      G Q  V  + + L+ SY RA   +EAL  F 
Sbjct: 531 HLYKRLALMLAKAGRFSEAEEEMRTSQTYG-QAQVSDFLKVLVASYDRAGMQDEALARFL 589

Query: 420 QMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAG 479
            M   G E D     T +  + + GF  VA ++      A    D+  +  II   GK  
Sbjct: 590 DMTTEGLEMDAEVLQTAVMCYCRKGFAFVAHELLIDCLHAFEVKDSAMHVAIIASYGKLK 649

Query: 480 HLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYS 539
             Q A  +F ++   G   N   Y+ +++  A+  N++ A +   +M  AG +P+    +
Sbjct: 650 LWQNAEIVFRDLQRHGFAGNTSAYSALLSAYAETGNFERATRALDNMVAAGLQPNAACAN 709

Query: 540 IVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQA 599
            V+E  G  G   E    +  +      P+   + ++   + + GN+ +A   Y  M +A
Sbjct: 710 YVLEAFGRAGKAKELSEFYQRLPEMGITPNSRTFVVIFHAFSRNGNLEEARSMYRQMREA 769

Query: 600 GLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
           G  P++    +LL+ + R     DA  L++ +   GL+  +  Y  ++S
Sbjct: 770 GFSPSIQVFKALLALYSRETVEIDAEELVKDIKKAGLELDMDIYNHMIS 818



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 62/294 (21%), Positives = 115/294 (39%), Gaps = 35/294 (11%)

Query: 390 GCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFL--- 446
           G    V T N ++ ++  +  L++A D+   +  +        Y  L  + AKAG     
Sbjct: 490 GVAVKVETLNDVLGAFEASGKLSDARDLVHAVSSIEPSVAAHLYKRLALMLAKAGRFSEA 549

Query: 447 --------------------------------DVAMDMYKKMQAAGLSPDTFTYSVIINC 474
                                           D A+  +  M   GL  D       + C
Sbjct: 550 EEEMRTSQTYGQAQVSDFLKVLVASYDRAGMQDEALARFLDMTTEGLEMDAEVLQTAVMC 609

Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPD 534
             + G    AH+L  + ++   + +   +  +IA   K + +Q+A  ++RD+Q  GF  +
Sbjct: 610 YCRKGFAFVAHELLIDCLHAFEVKDSAMHVAIIASYGKLKLWQNAEIVFRDLQRHGFAGN 669

Query: 535 KVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYE 594
              YS ++      G  + A      M      P+      +++ +G+AG  ++  E+Y+
Sbjct: 670 TSAYSALLSAYAETGNFERATRALDNMVAAGLQPNAACANYVLEAFGRAGKAKELSEFYQ 729

Query: 595 AMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
            + + G+ PN  T   +  AF R G L +A  + + M   G  PS+Q +  LL+
Sbjct: 730 RLPEMGITPNSRTFVVIFHAFSRNGNLEEARSMYRQMREAGFSPSIQVFKALLA 783


>gi|302769173|ref|XP_002968006.1| hypothetical protein SELMODRAFT_88008 [Selaginella moellendorffii]
 gi|300164744|gb|EFJ31353.1| hypothetical protein SELMODRAFT_88008 [Selaginella moellendorffii]
          Length = 737

 Score =  166 bits (420), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 102/352 (28%), Positives = 167/352 (47%), Gaps = 36/352 (10%)

Query: 332 QVLKQLQDHTVALGFFNWLRRQAGFKH--------------------------------- 358
           +VL+QL D   A+ FF+W   Q G+KH                                 
Sbjct: 104 RVLQQLDDLDKAVKFFDWCTGQPGYKHSKFTCNCLLSAFVRKKKAQEAYDLFKNHRCGLC 163

Query: 359 --DEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALD 416
             D  TY+T++    +AR F    +LLD+M + G  P+   YN +I        ++ AL 
Sbjct: 164 SPDSITYSTLINGFCKARDFQQAYRLLDEMEKRGIVPHNAVYNTIIKGLCDNGRVDSALV 223

Query: 417 VFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLG 476
            ++ MQ   C P  +TY  L+D   K+  +  A  + + M  AG +P+  TY+ +IN   
Sbjct: 224 HYRDMQ-RNCAPSVITYTILVDALCKSARISDASLILEDMIEAGCAPNVVTYNTLINGFC 282

Query: 477 KAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKV 536
           K G++  A  LF +M+   C P++ TYNI+I    K    Q   KL ++M   G EP+ +
Sbjct: 283 KLGNMDEAVVLFNQMLENSCSPDVFTYNILIDGYCKQERPQDGAKLLQEMVKYGCEPNFI 342

Query: 537 TYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAM 596
           TY+ +M+ L   G   +A  +   M R++  P    + L++D++ K G +  A+E ++ M
Sbjct: 343 TYNTLMDSLVKSGKYIDAFNLAQMMLRRDCKPSHFTFNLMIDMFCKVGQLDLAYELFQLM 402

Query: 597 LQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
              G  P++ T N ++S   R  ++ DA  LL+ M   G  P + TY  ++S
Sbjct: 403 TDRGCLPDIYTYNIMISGACRANRIDDARQLLERMTEAGCPPDVVTYNSIVS 454



 Score =  162 bits (410), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 110/388 (28%), Positives = 192/388 (49%), Gaps = 6/388 (1%)

Query: 359 DEHTYTTMV-GILGRAR-QFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALD 416
           D  TY  ++ G   + R Q GA  KLL +MV+ GC+PN +TYN L+ S  ++    +A +
Sbjct: 305 DVFTYNILIDGYCKQERPQDGA--KLLQEMVKYGCEPNFITYNTLMDSLVKSGKYIDAFN 362

Query: 417 VFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLG 476
           + + M    C+P   T+  +ID+  K G LD+A ++++ M   G  PD +TY+++I+   
Sbjct: 363 LAQMMLRRDCKPSHFTFNLMIDMFCKVGQLDLAYELFQLMTDRGCLPDIYTYNIMISGAC 422

Query: 477 KAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKV 536
           +A  +  A QL   M   GC P++VTYN +++   KA     A ++Y  ++N G+  D V
Sbjct: 423 RANRIDDARQLLERMTEAGCPPDVVTYNSIVSGLCKASQVDEAYEVYEVLRNGGYFLDVV 482

Query: 537 TYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAM 596
           T S +++ L     LD+AE +  EM R    PD   Y +L+  + KA  + K+  ++  M
Sbjct: 483 TCSTLIDGLCKSRRLDDAEKLLREMERNGSAPDVVAYTILIHGFCKADQLDKSLAFFSEM 542

Query: 597 LQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSP 656
           L  G  P V T + ++    +  ++ D   LL+ ML  G+ P    YT ++    ++ S 
Sbjct: 543 LDKGCVPTVITYSIVIDKLCKSARVRDGCMLLKTMLERGVTPDAIVYTSVIDGLCKSDS- 601

Query: 657 YDMGF-CHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRESKRGLVDA 715
           YD  +  ++LM  +G    +   ++        +  D     LE+M S+         ++
Sbjct: 602 YDEAYELYKLMKQTGCAPTVVTYNVLVDKLCKVSRLDEAIHLLEVMESDGCLPDTVTYNS 661

Query: 716 VVDFLHKSGLKEEAGSVWEVAAQKNVYP 743
           V D   KS   ++A  +++    +   P
Sbjct: 662 VFDGFWKSAEHDKAFRLFQAMKSRGCSP 689



 Score =  159 bits (402), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 90/290 (31%), Positives = 150/290 (51%)

Query: 359 DEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVF 418
           D +TY  M+    RA +     +LL++M   GC P+VVTYN ++    +A+ ++EA +V+
Sbjct: 410 DIYTYNIMISGACRANRIDDARQLLERMTEAGCPPDVVTYNSIVSGLCKASQVDEAYEVY 469

Query: 419 KQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKA 478
           + ++  G   D VT  TLID   K+  LD A  + ++M+  G +PD   Y+++I+   KA
Sbjct: 470 EVLRNGGYFLDVVTCSTLIDGLCKSRRLDDAEKLLREMERNGSAPDVVAYTILIHGFCKA 529

Query: 479 GHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTY 538
             L  +   F EM+++GC+P ++TY+I+I    K+   +    L + M   G  PD + Y
Sbjct: 530 DQLDKSLAFFSEMLDKGCVPTVITYSIVIDKLCKSARVRDGCMLLKTMLERGVTPDAIVY 589

Query: 539 SIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQ 598
           + V++ L      DEA  ++  M++    P    Y +LVD   K   + +A    E M  
Sbjct: 590 TSVIDGLCKSDSYDEAYELYKLMKQTGCAPTVVTYNVLVDKLCKVSRLDEAIHLLEVMES 649

Query: 599 AGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
            G  P+  T NS+   F +  +   A+ L Q M + G  P+   Y+LLL+
Sbjct: 650 DGCLPDTVTYNSVFDGFWKSAEHDKAFRLFQAMKSRGCSPTPFMYSLLLT 699



 Score =  153 bits (386), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 92/294 (31%), Positives = 146/294 (49%), Gaps = 2/294 (0%)

Query: 350 LRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRAN 409
           LRR     H   T+  M+ +  +  Q     +L   M   GC P++ TYN +I    RAN
Sbjct: 368 LRRDCKPSH--FTFNLMIDMFCKVGQLDLAYELFQLMTDRGCLPDIYTYNIMISGACRAN 425

Query: 410 YLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYS 469
            +++A  + ++M   GC PD VTY +++    KA  +D A ++Y+ ++  G   D  T S
Sbjct: 426 RIDDARQLLERMTEAGCPPDVVTYNSIVSGLCKASQVDEAYEVYEVLRNGGYFLDVVTCS 485

Query: 470 VIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNA 529
            +I+ L K+  L  A +L  EM   G  P++V Y I+I    KA     +L  + +M + 
Sbjct: 486 TLIDGLCKSRRLDDAEKLLREMERNGSAPDVVAYTILIHGFCKADQLDKSLAFFSEMLDK 545

Query: 530 GFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKA 589
           G  P  +TYSIV++ L     + +   +   M  +   PD  VY  ++D   K+ +  +A
Sbjct: 546 GCVPTVITYSIVIDKLCKSARVRDGCMLLKTMLERGVTPDAIVYTSVIDGLCKSDSYDEA 605

Query: 590 WEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTY 643
           +E Y+ M Q G  P V T N L+    +V +L +A HLL+ M + G  P   TY
Sbjct: 606 YELYKLMKQTGCAPTVVTYNVLVDKLCKVSRLDEAIHLLEVMESDGCLPDTVTY 659



 Score =  132 bits (333), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 77/249 (30%), Positives = 127/249 (51%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           R  G+  D  T +T++  L ++R+     KLL +M R+G  P+VV Y  LIH + +A+ L
Sbjct: 473 RNGGYFLDVVTCSTLIDGLCKSRRLDDAEKLLREMERNGSAPDVVAYTILIHGFCKADQL 532

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
           +++L  F +M   GC P  +TY  +ID   K+  +     + K M   G++PD   Y+ +
Sbjct: 533 DKSLAFFSEMLDKGCVPTVITYSIVIDKLCKSARVRDGCMLLKTMLERGVTPDAIVYTSV 592

Query: 472 INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF 531
           I+ L K+     A++L+  M   GC P +VTYN+++    K      A+ L   M++ G 
Sbjct: 593 IDGLCKSDSYDEAYELYKLMKQTGCAPTVVTYNVLVDKLCKVSRLDEAIHLLEVMESDGC 652

Query: 532 EPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWE 591
            PD VTY+ V +        D+A  +F  M+ +   P   +Y LL+        + +A E
Sbjct: 653 LPDTVTYNSVFDGFWKSAEHDKAFRLFQAMKSRGCSPTPFMYSLLLTKLVAEEKMDQAME 712

Query: 592 WYEAMLQAG 600
            +E  L+AG
Sbjct: 713 IWEEALEAG 721



 Score = 85.9 bits (211), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 57/237 (24%), Positives = 113/237 (47%), Gaps = 8/237 (3%)

Query: 298 VESVSRILRQWKWGPLAEEALGNTNYSMDAYQANQVLKQLQDHTVALGFFNWLRRQAGFK 357
           ++   ++LR+ +    A + +  T       +A+Q+ K       +L FF+ +  + G  
Sbjct: 497 LDDAEKLLREMERNGSAPDVVAYTILIHGFCKADQLDK-------SLAFFSEMLDK-GCV 548

Query: 358 HDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDV 417
               TY+ ++  L ++ +      LL  M+  G  P+ + Y  +I    +++  +EA ++
Sbjct: 549 PTVITYSIVIDKLCKSARVRDGCMLLKTMLERGVTPDAIVYTSVIDGLCKSDSYDEAYEL 608

Query: 418 FKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGK 477
           +K M+  GC P  VTY  L+D   K   LD A+ + + M++ G  PDT TY+ + +   K
Sbjct: 609 YKLMKQTGCAPTVVTYNVLVDKLCKVSRLDEAIHLLEVMESDGCLPDTVTYNSVFDGFWK 668

Query: 478 AGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPD 534
           +     A +LF  M ++GC P    Y++++           A++++ +   AG + D
Sbjct: 669 SAEHDKAFRLFQAMKSRGCSPTPFMYSLLLTKLVAEEKMDQAMEIWEEALEAGADVD 725


>gi|168047804|ref|XP_001776359.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162672319|gb|EDQ58858.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 499

 Score =  166 bits (420), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 110/382 (28%), Positives = 195/382 (51%), Gaps = 12/382 (3%)

Query: 275 SREMKIPAGLAPFSRHFASTGNVVESVSRILRQWKWGPLAEEALGNTNYSMDAY-QANQV 333
           SR +  P      +R +AS G + +SV  + R    G          N  +DA+ +A   
Sbjct: 48  SRYILQPRIFIELARGYASAGLLEKSVEALKRME--GHRCALTASAYNSLIDAFVKAGYT 105

Query: 334 LKQLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQP 393
            K L  + V +G       Q+G + D +T+  ++    +A++  ++ KL ++M    C P
Sbjct: 106 QKALAVYRV-MG-------QSGLRPDTYTFNVLMNAFKKAKRVDSVWKLFEEMQNQNCSP 157

Query: 394 NVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMY 453
           NV+TY+ LI +  +   + +AL VF  M+  GC P+  TY ++ID   K+G +D A  ++
Sbjct: 158 NVITYSILIDAVCKCGGVEKALKVFLDMKSRGCRPNIFTYTSMIDGLGKSGHVDKAFFLF 217

Query: 454 KKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKA 513
           ++M + GL      Y+ +I+ LG++G   AA +LF EM+++G  P+ VT+  ++     A
Sbjct: 218 EEMTSEGLVATRVVYNSLIHGLGRSGRADAAAKLFREMLSKGLQPDHVTFTSLVYGLGVA 277

Query: 514 RNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVY 573
                A +++++ ++ G   D   Y+++++ L     LDEA  +F E+     VPD   +
Sbjct: 278 GRASEARRIFQEARDVGCALDVNLYNVLIDTLCKSKRLDEAWEIFGELEEDGLVPDVYTF 337

Query: 574 GLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLN 633
             L+D   K+G +  A+     M +AG  P+V   N+L+    + G++ +A  LL  M +
Sbjct: 338 NALMDGLCKSGRIHDAFILLGDMKRAGCTPDVTVYNTLIDGLRKSGRVEEAGQLLLEMQS 397

Query: 634 LGLKPSLQTY-TLLLSCCTEAR 654
           LG +P + TY TL+   C   R
Sbjct: 398 LGYEPDVVTYNTLIDESCKGGR 419



 Score =  164 bits (415), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 122/409 (29%), Positives = 197/409 (48%), Gaps = 8/409 (1%)

Query: 342 VALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMV--RDGCQPNVVTYN 399
           +A  FF W+R Q G        TT+V +LG AR+F    ++L ++   R   QP +  + 
Sbjct: 1   MAYKFFKWVRTQRGGVPSVRACTTLVEMLGIARRFNEAEEVLAEVEKSRYILQPRI--FI 58

Query: 400 RLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAA 459
            L   Y  A  L ++++  K+M+   C      Y +LID   KAG+   A+ +Y+ M  +
Sbjct: 59  ELARGYASAGLLEKSVEALKRMEGHRCALTASAYNSLIDAFVKAGYTQKALAVYRVMGQS 118

Query: 460 GLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSA 519
           GL PDT+T++V++N   KA  + +  +LF EM NQ C PN++TY+I+I    K    + A
Sbjct: 119 GLRPDTYTFNVLMNAFKKAKRVDSVWKLFEEMQNQNCSPNVITYSILIDAVCKCGGVEKA 178

Query: 520 LKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDL 579
           LK++ DM++ G  P+  TY+ +++ LG  G++D+A  +F EM  +  V    VY  L+  
Sbjct: 179 LKVFLDMKSRGCRPNIFTYTSMIDGLGKSGHVDKAFFLFEEMTSEGLVATRVVYNSLIHG 238

Query: 580 WGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPS 639
            G++G    A + +  ML  GL+P+  T  SL+      G+ S+A  + Q   ++G    
Sbjct: 239 LGRSGRADAAAKLFREMLSKGLQPDHVTFTSLVYGLGVAGRASEARRIFQEARDVGCALD 298

Query: 640 LQTYTLLL-SCCTEARSPYDMGFCHELMAVSGHP-AHMFLLSMPSPGPDGQNVRDHVGSF 697
           +  Y +L+ + C   R         EL      P  + F   M      G+ + D     
Sbjct: 299 VNLYNVLIDTLCKSKRLDEAWEIFGELEEDGLVPDVYTFNALMDGLCKSGR-IHDAF-IL 356

Query: 698 LEMMHSEDRESKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAV 746
           L  M          + + ++D L KSG  EEAG +          PD V
Sbjct: 357 LGDMKRAGCTPDVTVYNTLIDGLRKSGRVEEAGQLLLEMQSLGYEPDVV 405



 Score =  143 bits (360), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 88/306 (28%), Positives = 152/306 (49%), Gaps = 5/306 (1%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           +  G + +  TYT+M+  LG++        L ++M  +G     V YN LIH  GR+   
Sbjct: 186 KSRGCRPNIFTYTSMIDGLGKSGHVDKAFFLFEEMTSEGLVATRVVYNSLIHGLGRSGRA 245

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
           + A  +F++M   G +PD VT+ +L+     AG    A  ++++ +  G + D   Y+V+
Sbjct: 246 DAAAKLFREMLSKGLQPDHVTFTSLVYGLGVAGRASEARRIFQEARDVGCALDVNLYNVL 305

Query: 472 INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF 531
           I+ L K+  L  A ++F E+   G +P++ T+N ++    K+     A  L  DM+ AG 
Sbjct: 306 IDTLCKSKRLDEAWEIFGELEEDGLVPDVYTFNALMDGLCKSGRIHDAFILLGDMKRAGC 365

Query: 532 EPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWE 591
            PD   Y+ +++ L   G ++EA  +  EM+   + PD   Y  L+D   K G +  A  
Sbjct: 366 TPDVTVYNTLIDGLRKSGRVEEAGQLLLEMQSLGYEPDVVTYNTLIDESCKGGRIEDALR 425

Query: 592 WYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGM----LNLGLKPSLQTYTLLL 647
            +E +   G   N  T N++L+     G++ +AY L  GM    ++  + P   TYT LL
Sbjct: 426 LFEEISAKGF-ANTVTYNTILNGLCMAGRVDEAYKLFNGMKQETVDGVIDPDFVTYTTLL 484

Query: 648 SCCTEA 653
           +   +A
Sbjct: 485 NGARQA 490



 Score = 64.3 bits (155), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 50/207 (24%), Positives = 86/207 (41%)

Query: 549 GYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTC 608
           G L+++      M           Y  L+D + KAG  +KA   Y  M Q+GLRP+  T 
Sbjct: 68  GLLEKSVEALKRMEGHRCALTASAYNSLIDAFVKAGYTQKALAVYRVMGQSGLRPDTYTF 127

Query: 609 NSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGFCHELMAV 668
           N L++AF +  ++   + L + M N    P++ TY++L+    +             M  
Sbjct: 128 NVLMNAFKKAKRVDSVWKLFEEMQNQNCSPNVITYSILIDAVCKCGGVEKALKVFLDMKS 187

Query: 669 SGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRESKRGLVDAVVDFLHKSGLKEE 728
            G   ++F  +    G       D      E M SE   + R + ++++  L +SG  + 
Sbjct: 188 RGCRPNIFTYTSMIDGLGKSGHVDKAFFLFEEMTSEGLVATRVVYNSLIHGLGRSGRADA 247

Query: 729 AGSVWEVAAQKNVYPDAVKEKGMSYWL 755
           A  ++     K + PD V    + Y L
Sbjct: 248 AAKLFREMLSKGLQPDHVTFTSLVYGL 274



 Score = 64.3 bits (155), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 45/173 (26%), Positives = 75/173 (43%), Gaps = 38/173 (21%)

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
           + G   D +T+  ++  L ++ +      LL  M R GC P+V  YN LI    ++  + 
Sbjct: 327 EDGLVPDVYTFNALMDGLCKSGRIHDAFILLGDMKRAGCTPDVTVYNTLIDGLRKSGRVE 386

Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLS---------- 462
           EA  +  +MQ +G EPD VTY TLID   K G ++ A+ +++++ A G +          
Sbjct: 387 EAGQLLLEMQSLGYEPDVVTYNTLIDESCKGGRIEDALRLFEEISAKGFANTVTYNTILN 446

Query: 463 ----------------------------PDTFTYSVIINCLGKAGHLQAAHQL 487
                                       PD  TY+ ++N   +AG  + A+ L
Sbjct: 447 GLCMAGRVDEAYKLFNGMKQETVDGVIDPDFVTYTTLLNGARQAGLSELANSL 499


>gi|242069957|ref|XP_002450255.1| hypothetical protein SORBIDRAFT_05g002620 [Sorghum bicolor]
 gi|241936098|gb|EES09243.1| hypothetical protein SORBIDRAFT_05g002620 [Sorghum bicolor]
          Length = 924

 Score =  166 bits (419), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 113/414 (27%), Positives = 197/414 (47%), Gaps = 19/414 (4%)

Query: 359 DEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVF 418
           D  TY  ++  L +  +      L D M+R G +P+V  Y  ++H YG+   L+E  D+ 
Sbjct: 434 DVFTYGLLLDYLCKNGKCNEARSLFDSMIRKGIKPSVTIYGIMLHGYGKKGALSEMHDLL 493

Query: 419 KQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKA 478
             M   G  P+   + T+I  +AK   +D  M ++ KM+  GLSP+  TY  +I+ L K 
Sbjct: 494 NLMVANGISPNHRIFNTVICAYAKRAMIDEVMHIFIKMKQQGLSPNVVTYGTLIDALCKL 553

Query: 479 GHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTY 538
           G +  A   F +M+N+G  PN V +N ++        ++   +L+ +M N G  PD V +
Sbjct: 554 GRVDDAVLQFNQMINEGVTPNNVVFNSLVYGLCTVDKWEKVEELFLEMLNQGIRPDIVFF 613

Query: 539 SIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQ 598
           + V+  L   G + EA  +   M      PD   Y  L+D    A  + +A +  + M+ 
Sbjct: 614 NTVLCNLCKEGRVMEARRLIDSMVCMGLKPDVISYNTLIDGHCFASRMDEAVKLLDGMVS 673

Query: 599 AGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCC------TE 652
           AGL+PN+ + N+LL  + + G++ +AY L + ML  G+ P ++TY  +L+        +E
Sbjct: 674 AGLKPNIVSYNTLLHGYCKAGRIDNAYCLFREMLRKGVTPGVETYNTILNGLFRSGRFSE 733

Query: 653 ARSPY-DMGFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRESKRG 711
           AR  Y +M    +L ++  +       S+   G    N  D      + + S D +    
Sbjct: 734 ARELYVNMIKSRKLWSICTY-------SIILDGFCKNNCFDEAFKIFQSLCSMDLQLDII 786

Query: 712 LVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAVKEKGMSYWLINLHVMSDGT 765
             + ++D L K G KE+A  ++       + P  V     +Y LI  +++ +G+
Sbjct: 787 TFNIMIDGLFKGGRKEDAMDLFAAIPANGLVPSVV-----TYRLIAENLIEEGS 835



 Score =  164 bits (415), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 93/303 (30%), Positives = 162/303 (53%), Gaps = 1/303 (0%)

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
           + G K +  TY T++  L +A++      +  +MV  G +P+ VTYN +I    +A  ++
Sbjct: 253 EKGVKPNNVTYNTIIDGLCKAQEVDMAEGVFQKMVDKGVKPSNVTYNTIIDGLCKAQAVD 312

Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
            A  VF+QM   G +PD VTY T+ID   KA  +D A  ++++M   G+ PD  TY++II
Sbjct: 313 RAEGVFQQMIDRGVKPDHVTYNTIIDGLCKAQAIDKAEGVFQQMIDKGVKPDNLTYTIII 372

Query: 473 NCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFE 532
           + L KA  +  A  +F +M+++G  PN  TYN +I        ++  ++  ++M     E
Sbjct: 373 DGLCKAQSVDRAEGVFQQMIDKGVKPNNGTYNCLIHGYLSTGQWEEVVQRIKEMSAHDLE 432

Query: 533 PDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEW 592
           PD  TY ++++ L   G  +EA ++F  M RK   P   +YG+++  +GK G + +  + 
Sbjct: 433 PDVFTYGLLLDYLCKNGKCNEARSLFDSMIRKGIKPSVTIYGIMLHGYGKKGALSEMHDL 492

Query: 593 YEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTY-TLLLSCCT 651
              M+  G+ PN    N+++ A+ +   + +  H+   M   GL P++ TY TL+ + C 
Sbjct: 493 LNLMVANGISPNHRIFNTVICAYAKRAMIDEVMHIFIKMKQQGLSPNVVTYGTLIDALCK 552

Query: 652 EAR 654
             R
Sbjct: 553 LGR 555



 Score =  155 bits (391), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 98/322 (30%), Positives = 167/322 (51%), Gaps = 9/322 (2%)

Query: 345 GFFNW--------LRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVV 396
           GFFN         L  + G   D  TY T++  L +A++      +  QMV  G +PN V
Sbjct: 202 GFFNEGQVDKAYSLFLEMGVSPDVVTYNTIIDGLCKAQEVDRAEDVFQQMVEKGVKPNNV 261

Query: 397 TYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKM 456
           TYN +I    +A  ++ A  VF++M   G +P  VTY T+ID   KA  +D A  ++++M
Sbjct: 262 TYNTIIDGLCKAQEVDMAEGVFQKMVDKGVKPSNVTYNTIIDGLCKAQAVDRAEGVFQQM 321

Query: 457 QAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNY 516
              G+ PD  TY+ II+ L KA  +  A  +F +M+++G  P+ +TY I+I    KA++ 
Sbjct: 322 IDRGVKPDHVTYNTIIDGLCKAQAIDKAEGVFQQMIDKGVKPDNLTYTIIIDGLCKAQSV 381

Query: 517 QSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLL 576
             A  +++ M + G +P+  TY+ ++      G  +E      EM   +  PD   YGLL
Sbjct: 382 DRAEGVFQQMIDKGVKPNNGTYNCLIHGYLSTGQWEEVVQRIKEMSAHDLEPDVFTYGLL 441

Query: 577 VDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGL 636
           +D   K G   +A   +++M++ G++P+V     +L  + + G LS+ + LL  M+  G+
Sbjct: 442 LDYLCKNGKCNEARSLFDSMIRKGIKPSVTIYGIMLHGYGKKGALSEMHDLLNLMVANGI 501

Query: 637 KPSLQTYTLLLSCCTEARSPYD 658
            P+ + +  ++ C    R+  D
Sbjct: 502 SPNHRIFNTVI-CAYAKRAMID 522



 Score =  152 bits (384), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 136/493 (27%), Positives = 225/493 (45%), Gaps = 59/493 (11%)

Query: 342 VALGFFNW-LRRQAGFKHDEHTYTTMVGILGRARQFG-AINKLLDQMVRDGCQPNVVTYN 399
           + LGF  + L  + G++ D+     ++  L   ++ G A++ LL QM   GC+  VV+YN
Sbjct: 100 LELGFAAFGLILKTGWRVDDIVVNQLLKGLCDTKRVGEAMHVLLRQMPEVGCRLGVVSYN 159

Query: 400 RLIHSYG---RANYLNEAL-------------DV----------FKQMQV---------V 424
            L+       RA    E L             DV          F + QV         +
Sbjct: 160 TLLKGLCDRRRAEEARELLHMMVDGQDSSCSPDVVSYNIVINGFFNEGQVDKAYSLFLEM 219

Query: 425 GCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAA 484
           G  PD VTY T+ID   KA  +D A D++++M   G+ P+  TY+ II+ L KA  +  A
Sbjct: 220 GVSPDVVTYNTIIDGLCKAQEVDRAEDVFQQMVEKGVKPNNVTYNTIIDGLCKAQEVDMA 279

Query: 485 HQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEV 544
             +F +MV++G  P+ VTYN +I    KA+    A  +++ M + G +PD VTY+ +++ 
Sbjct: 280 EGVFQKMVDKGVKPSNVTYNTIIDGLCKAQAVDRAEGVFQQMIDRGVKPDHVTYNTIIDG 339

Query: 545 LGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPN 604
           L     +D+AE VF +M  K   PD   Y +++D   KA +V +A   ++ M+  G++PN
Sbjct: 340 LCKAQAIDKAEGVFQQMIDKGVKPDNLTYTIIIDGLCKAQSVDRAEGVFQQMIDKGVKPN 399

Query: 605 VPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS--C----CTEARSPYD 658
             T N L+  +L  GQ  +    ++ M    L+P + TY LLL   C    C EARS +D
Sbjct: 400 NGTYNCLIHGYLSTGQWEEVVQRIKEMSAHDLEPDVFTYGLLLDYLCKNGKCNEARSLFD 459

Query: 659 MGFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRESKRGLVDAVVD 718
                  M   G    + +  +   G   +     +   L +M +        + + V+ 
Sbjct: 460 S------MIRKGIKPSVTIYGIMLHGYGKKGALSEMHDLLNLMVANGISPNHRIFNTVIC 513

Query: 719 FLHKSGLKEEAGSVWEVAAQKNVYPDAVKEKGMSYWLINLHVMSDGTAVIALSRTLAWFR 778
              K  + +E   ++    Q+ + P+ V    +   L  L  + D  AV+  +       
Sbjct: 514 AYAKRAMIDEVMHIFIKMKQQGLSPNVVTYGTLIDALCKLGRVDD--AVLQFN------- 564

Query: 779 KQMLISGVGPSRI 791
            QM+  GV P+ +
Sbjct: 565 -QMINEGVTPNNV 576



 Score =  137 bits (344), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 87/301 (28%), Positives = 139/301 (46%), Gaps = 1/301 (0%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           G K D  TY T++  L +A+       +  QM+  G +P+ +TY  +I    +A  ++ A
Sbjct: 325 GVKPDHVTYNTIIDGLCKAQAIDKAEGVFQQMIDKGVKPDNLTYTIIIDGLCKAQSVDRA 384

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
             VF+QM   G +P+  TY  LI  +   G  +  +   K+M A  L PD FTY ++++ 
Sbjct: 385 EGVFQQMIDKGVKPNNGTYNCLIHGYLSTGQWEEVVQRIKEMSAHDLEPDVFTYGLLLDY 444

Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPD 534
           L K G    A  LF  M+ +G  P++  Y IM+    K         L   M   G  P+
Sbjct: 445 LCKNGKCNEARSLFDSMIRKGIKPSVTIYGIMLHGYGKKGALSEMHDLLNLMVANGISPN 504

Query: 535 KVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYE 594
              ++ V+        +DE   +F +M+++   P+   YG L+D   K G V  A   + 
Sbjct: 505 HRIFNTVICAYAKRAMIDEVMHIFIKMKQQGLSPNVVTYGTLIDALCKLGRVDDAVLQFN 564

Query: 595 AMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTY-TLLLSCCTEA 653
            M+  G+ PN    NSL+     V +      L   MLN G++P +  + T+L + C E 
Sbjct: 565 QMINEGVTPNNVVFNSLVYGLCTVDKWEKVEELFLEMLNQGIRPDIVFFNTVLCNLCKEG 624

Query: 654 R 654
           R
Sbjct: 625 R 625



 Score =  117 bits (292), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 74/294 (25%), Positives = 151/294 (51%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           G + D   + T++  L +  +     +L+D MV  G +P+V++YN LI  +  A+ ++EA
Sbjct: 605 GIRPDIVFFNTVLCNLCKEGRVMEARRLIDSMVCMGLKPDVISYNTLIDGHCFASRMDEA 664

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
           + +   M   G +P+ V+Y TL+  + KAG +D A  ++++M   G++P   TY+ I+N 
Sbjct: 665 VKLLDGMVSAGLKPNIVSYNTLLHGYCKAGRIDNAYCLFREMLRKGVTPGVETYNTILNG 724

Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPD 534
           L ++G    A +L+  M+    + ++ TY+I++    K   +  A K+++ + +   + D
Sbjct: 725 LFRSGRFSEARELYVNMIKSRKLWSICTYSIILDGFCKNNCFDEAFKIFQSLCSMDLQLD 784

Query: 535 KVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYE 594
            +T++I+++ L   G  ++A  +FA +     VP    Y L+ +   + G++ +    + 
Sbjct: 785 IITFNIMIDGLFKGGRKEDAMDLFAAIPANGLVPSVVTYRLIAENLIEEGSLEELDCLFS 844

Query: 595 AMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
            M ++G  PN    N+L+   L  G++  A   L  +          T ++L+S
Sbjct: 845 VMEKSGTAPNSHMLNALIRKLLDRGEIPRAGAYLSKLDEKNFSLEASTTSMLIS 898



 Score =  116 bits (290), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 82/327 (25%), Positives = 150/327 (45%), Gaps = 2/327 (0%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           +Q G   +  TY T++  L +  +        +QM+ +G  PN V +N L++     +  
Sbjct: 532 KQQGLSPNVVTYGTLIDALCKLGRVDDAVLQFNQMINEGVTPNNVVFNSLVYGLCTVDKW 591

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
            +  ++F +M   G  PD V + T++    K G +  A  +   M   GL PD  +Y+ +
Sbjct: 592 EKVEELFLEMLNQGIRPDIVFFNTVLCNLCKEGRVMEARRLIDSMVCMGLKPDVISYNTL 651

Query: 472 INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF 531
           I+    A  +  A +L   MV+ G  PN+V+YN ++    KA    +A  L+R+M   G 
Sbjct: 652 IDGHCFASRMDEAVKLLDGMVSAGLKPNIVSYNTLLHGYCKAGRIDNAYCLFREMLRKGV 711

Query: 532 EPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWE 591
            P   TY+ ++  L   G   EA  ++  M +   +     Y +++D + K     +A++
Sbjct: 712 TPGVETYNTILNGLFRSGRFSEARELYVNMIKSRKLWSICTYSIILDGFCKNNCFDEAFK 771

Query: 592 WYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCT 651
            ++++    L+ ++ T N ++    + G+  DA  L   +   GL PS+ TY L+     
Sbjct: 772 IFQSLCSMDLQLDIITFNIMIDGLFKGGRKEDAMDLFAAIPANGLVPSVVTYRLIAENLI 831

Query: 652 EARSPYDMGFCHELMAVSGHP--AHMF 676
           E  S  ++     +M  SG    +HM 
Sbjct: 832 EEGSLEELDCLFSVMEKSGTAPNSHML 858



 Score =  104 bits (260), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 70/263 (26%), Positives = 124/263 (47%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           G K D  +Y T++     A +     KLLD MV  G +PN+V+YN L+H Y +A  ++ A
Sbjct: 640 GLKPDVISYNTLIDGHCFASRMDEAVKLLDGMVSAGLKPNIVSYNTLLHGYCKAGRIDNA 699

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
             +F++M   G  P   TY T+++   ++G    A ++Y  M  +       TYS+I++ 
Sbjct: 700 YCLFREMLRKGVTPGVETYNTILNGLFRSGRFSEARELYVNMIKSRKLWSICTYSIILDG 759

Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPD 534
             K      A ++F  + +     +++T+NIMI    K    + A+ L+  +   G  P 
Sbjct: 760 FCKNNCFDEAFKIFQSLCSMDLQLDIITFNIMIDGLFKGGRKEDAMDLFAAIPANGLVPS 819

Query: 535 KVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYE 594
            VTY ++ E L   G L+E + +F+ M +    P+  +   L+      G + +A  +  
Sbjct: 820 VVTYRLIAENLIEEGSLEELDCLFSVMEKSGTAPNSHMLNALIRKLLDRGEIPRAGAYLS 879

Query: 595 AMLQAGLRPNVPTCNSLLSAFLR 617
            + +        T + L+S F R
Sbjct: 880 KLDEKNFSLEASTTSMLISLFSR 902



 Score = 91.3 bits (225), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 93/392 (23%), Positives = 172/392 (43%), Gaps = 23/392 (5%)

Query: 370 LGRARQFGAIN-----KLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNE---ALDVFKQM 421
           +GRAR  G +      KL D+++      +V   N+L+    RA   +    A+  F +M
Sbjct: 14  IGRARS-GNLGLHDALKLFDELLLHARPASVRALNQLLSVVSRAKCSSSSKLAVSRFNRM 72

Query: 422 QVVGCE----PDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGK 477
            +  C     PD  TY  +I    + G L++    +  +   G   D    + ++  L  
Sbjct: 73  -LRDCSNKVAPDCCTYSIVIGCFCRIGRLELGFAAFGLILKTGWRVDDIVVNQLLKGLCD 131

Query: 478 AGHL-QAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSA---LKLYRDMQNAGFEP 533
              + +A H L  +M   GC   +V+YN ++      R  + A   L +  D Q++   P
Sbjct: 132 TKRVGEAMHVLLRQMPEVGCRLGVVSYNTLLKGLCDRRRAEEARELLHMMVDGQDSSCSP 191

Query: 534 DKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWY 593
           D V+Y+IV+    + G +D+A ++F EM      PD   Y  ++D   KA  V +A + +
Sbjct: 192 DVVSYNIVINGFFNEGQVDKAYSLFLEM---GVSPDVVTYNTIIDGLCKAQEVDRAEDVF 248

Query: 594 EAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTY-TLLLSCCTE 652
           + M++ G++PN  T N+++    +  ++  A  + Q M++ G+KPS  TY T++   C  
Sbjct: 249 QQMVEKGVKPNNVTYNTIIDGLCKAQEVDMAEGVFQKMVDKGVKPSNVTYNTIIDGLCKA 308

Query: 653 ARSPYDMGFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRESKRGL 712
                  G   +++     P H+   ++       Q +    G F +M+    +      
Sbjct: 309 QAVDRAEGVFQQMIDRGVKPDHVTYNTIIDGLCKAQAIDKAEGVFQQMIDKGVKPDNLTY 368

Query: 713 VDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPD 744
              ++D L K+   + A  V++    K V P+
Sbjct: 369 T-IIIDGLCKAQSVDRAEGVFQQMIDKGVKPN 399


>gi|147841962|emb|CAN63129.1| hypothetical protein VITISV_001456 [Vitis vinifera]
          Length = 701

 Score =  166 bits (419), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 130/550 (23%), Positives = 246/550 (44%), Gaps = 46/550 (8%)

Query: 282 AGLAPFSRHFASTGNVVESVSRILRQWKWGPLAEEALGNTNYSMDAYQANQVLKQLQDHT 341
           A L   +    S     E VS++LR           LG+     DA     VL  + +  
Sbjct: 111 ASLVKIAESLDSCEATEEDVSQVLR----------CLGDKILEQDAVI---VLNNMTNPE 157

Query: 342 VALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRL 401
            AL  F + R++     +   Y   + +  + R      KL D+M+  G +P+ +T++ +
Sbjct: 158 TALLAFGFFRKRLKPSREVILYNVTLKVFRKCRNLDXAEKLFDEMLERGVKPDNITFSTI 217

Query: 402 IHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGL 461
           I     ++  N+A++ F++M   GC PD VTY  +ID + +AG +D+A+ +Y + +    
Sbjct: 218 ISCARVSSLPNKAVEWFEKMPEFGCHPDDVTYSAMIDAYGRAGNVDMALKLYDRARTEKW 277

Query: 462 SPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALK 521
             D  T+S +I   G +G+      ++ EM   G  PNLV YN ++    +A+    A  
Sbjct: 278 RIDPVTFSTLIRIYGMSGNFDGCLNVYEEMKALGVKPNLVIYNTLLDAMGRAKRPWQAKN 337

Query: 522 LYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWG 581
           +Y++M N G +    TY+ ++   G   Y ++A  V+ EM+ K       +Y  L+ +  
Sbjct: 338 IYKEMTNNGLQLSWGTYAALLRAYGRARYAEDALIVYKEMKEKGLELSVVLYNTLLAMCA 397

Query: 582 KAGNVRKAWEWYEAMLQAG-LRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSL 640
             G   +A   +E M  +G   P+  T +SL++ +   G++S+A  +L  ML  G +P++
Sbjct: 398 DVGYTEEAAAIFEDMKSSGNCMPDSWTFSSLITIYSCSGKVSEAEAMLNAMLEAGFEPNI 457

Query: 641 QTYTLLLSCCTEA-RSPYDMGFCHELMAVSGHPAHMF---LLSMPSPGPDGQ-------- 688
              T L+ C  +A R+   +     L+ +   P   F   +L++ +  P  +        
Sbjct: 458 FVLTSLIQCYGKANRTDEVVRTFDRLLELDITPDDRFCGCMLNVMTQSPKEELGKLIDCI 517

Query: 689 -NVRDHVGSFLEMMHSED------RESKRGLVDAV------------VDFLHKSGLKEEA 729
                 +G+ ++++  E       R+    L D++            +D      L E+A
Sbjct: 518 DKANPKLGNVVKLLLEEQNGEGTFRKEASELFDSISADVXKAYCNCLIDLCVNLNLLEKA 577

Query: 730 GSVWEVAAQKNVYPDAVKEKGMSYWLINLHVMSDGTAVIALSRTLAWFRKQMLISGVGPS 789
             ++++     +Y D ++ K  + W ++L  +S G A+ AL   +    K + +    P+
Sbjct: 578 CELFDLGLTLEIYID-IQSKSPTQWSLHLKSLSLGAALTALHIWMNDLSKAVEVGEELPA 636

Query: 790 RIDIVTGWGR 799
            + I TG G+
Sbjct: 637 VLGINTGHGK 646


>gi|225434273|ref|XP_002276453.1| PREDICTED: pentatricopeptide repeat-containing protein At5g65560
           [Vitis vinifera]
 gi|296084392|emb|CBI24780.3| unnamed protein product [Vitis vinifera]
          Length = 890

 Score =  166 bits (419), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 125/429 (29%), Positives = 198/429 (46%), Gaps = 47/429 (10%)

Query: 362 TYTTMVGIL-GRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQ 420
           TYT ++  L G  R+  A+N L ++M   GC+PNV TY  LI    + N ++EA  +  +
Sbjct: 301 TYTVLIYALSGSGRKVEALN-LFNEMKEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSE 359

Query: 421 MQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGH 480
           M   G  P  VTY  LID + K G +D A ++   M++    P+T TY+ +I  L K   
Sbjct: 360 MSEKGLIPSVVTYNALIDGYCKEGMIDDAFEILDLMESNSCGPNTRTYNELICGLCKKRK 419

Query: 481 LQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSI 540
           +  A  L  +M+ +   P+L+TYN +I  Q K  + +SA +L   M   G  PD+ TYS+
Sbjct: 420 VHKAMALLNKMLERKLSPSLITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSV 479

Query: 541 VMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAG 600
            ++ L   G ++EA  +F  ++ K    +E +Y  L+D + K G +  A+   E ML   
Sbjct: 480 FIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDA 539

Query: 601 LRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMG 660
             PN  T N L+    +  ++ +A  L+  ML +G+KP++ TYT+L+          D  
Sbjct: 540 CLPNSYTYNVLIEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTILI-----GEMLKDGA 594

Query: 661 FCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRESKRGLVDAVVDFL 720
           F H L   +    HM  L      PD       V ++   +H+                 
Sbjct: 595 FDHALKVFN----HMVSLGYQ---PD-------VCTYTAFLHA----------------Y 624

Query: 721 HKSGLKEEAGSVWEVAAQKNVYPDAVKEKGMSYWLINLHVMSDGTAVIALSRTLAWFRKQ 780
              G+ EE   V     ++ + PD          L+   V+ DG A + L+     F K 
Sbjct: 625 FSQGMLEEVDDVIAKMNEEGILPD----------LVTYTVLIDGYARLGLTHRAFDFLKC 674

Query: 781 MLISGVGPS 789
           M+ +G  PS
Sbjct: 675 MVDTGCKPS 683



 Score =  152 bits (385), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 117/435 (26%), Positives = 203/435 (46%), Gaps = 31/435 (7%)

Query: 339 DHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGC------- 391
           D   AL FFNW+  + GFKH+ H+Y++M+ IL RAR  G   K+   M++  C       
Sbjct: 80  DPQTALSFFNWIALRPGFKHNVHSYSSMLNILIRARLLGVAEKIRISMIKSCCSIEDVLF 139

Query: 392 ----------------QPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCT 435
                           +P +  YN ++ S  +   ++E   V+ ++      P+  T+  
Sbjct: 140 VLEVFRKMNADGEFKFKPTLRCYNTILMSLSKFLLIDEMKTVYLELLNNQISPNIYTFNA 199

Query: 436 LIDIHAKAGFLDVAMDMY-KKMQAAGLSPDTFTYSVII--NCLGKAGHLQAAHQLFCEMV 492
           +++ + K G + V  ++Y  K+  AGL PDTFTY+ +I  +C  K   +  A+++F  M 
Sbjct: 200 MVNGYCKIGNV-VEAELYASKIVQAGLHPDTFTYTSLILGHCRNKG--VDNAYEVFLIMP 256

Query: 493 NQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLD 552
            +GC  N V+Y  +I    +A     ALKL+ DM      P   TY++++  L   G   
Sbjct: 257 QKGCQRNEVSYTNLIHGLCEAGRINEALKLFADMTEDNCCPTVRTYTVLIYALSGSGRKV 316

Query: 553 EAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLL 612
           EA  +F EM+ K   P+   Y +L+D   K   + +A +    M + GL P+V T N+L+
Sbjct: 317 EALNLFNEMKEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALI 376

Query: 613 SAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYT-LLLSCCTEARSPYDMGFCHELMAVSGH 671
             + + G + DA+ +L  M +    P+ +TY  L+   C + +    M   ++++     
Sbjct: 377 DGYCKEGMIDDAFEILDLMESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLERKLS 436

Query: 672 PAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRESKRGLVDAVVDFLHKSGLKEEAGS 731
           P+ +   S+   G    N  +     L +M+       +      +D L K G  EEAG+
Sbjct: 437 PSLITYNSLIH-GQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGT 495

Query: 732 VWEVAAQKNVYPDAV 746
           +++    K V  + V
Sbjct: 496 LFDSVKAKGVKANEV 510



 Score =  137 bits (346), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 81/286 (28%), Positives = 138/286 (48%)

Query: 362 TYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQM 421
           TY  ++  L + R+      LL++M+     P+++TYN LIH   + N L  A  +   M
Sbjct: 406 TYNELICGLCKKRKVHKAMALLNKMLERKLSPSLITYNSLIHGQCKVNDLESAYRLLSLM 465

Query: 422 QVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHL 481
              G  PD+ TY   ID   K G ++ A  ++  ++A G+  +   Y+ +I+   K G +
Sbjct: 466 NENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTALIDGYCKVGKI 525

Query: 482 QAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIV 541
             A+ L   M+N  C+PN  TYN++I    K +  + A  L   M   G +P  VTY+I+
Sbjct: 526 DVAYSLLERMLNDACLPNSYTYNVLIEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTIL 585

Query: 542 MEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGL 601
           +  +   G  D A  VF  M    + PD   Y   +  +   G + +  +    M + G+
Sbjct: 586 IGEMLKDGAFDHALKVFNHMVSLGYQPDVCTYTAFLHAYFSQGMLEEVDDVIAKMNEEGI 645

Query: 602 RPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
            P++ T   L+  + R+G    A+  L+ M++ G KPSL   ++L+
Sbjct: 646 LPDLVTYTVLIDGYARLGLTHRAFDFLKCMVDTGCKPSLYIVSILI 691



 Score =  135 bits (341), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 87/307 (28%), Positives = 152/307 (49%), Gaps = 5/307 (1%)

Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLI 402
           AL  FN ++ + G + + HTYT ++  L +  +     K+L +M   G  P+VVTYN LI
Sbjct: 318 ALNLFNEMKEK-GCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALI 376

Query: 403 HSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLS 462
             Y +   +++A ++   M+   C P+  TY  LI    K   +  AM +  KM    LS
Sbjct: 377 DGYCKEGMIDDAFEILDLMESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLERKLS 436

Query: 463 PDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKL 522
           P   TY+ +I+   K   L++A++L   M   G +P+  TY++ I    K    + A  L
Sbjct: 437 PSLITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTL 496

Query: 523 YRDMQNAGFEPDKVTYSIVMEVLGHC--GYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLW 580
           +  ++  G + ++V Y+ +++  G+C  G +D A ++   M     +P+   Y +L++  
Sbjct: 497 FDSVKAKGVKANEVIYTALID--GYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEGL 554

Query: 581 GKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSL 640
            K   +++A      ML  G++P V T   L+   L+ G    A  +   M++LG +P +
Sbjct: 555 CKEKKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKVFNHMVSLGYQPDV 614

Query: 641 QTYTLLL 647
            TYT  L
Sbjct: 615 CTYTAFL 621



 Score =  125 bits (315), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 83/314 (26%), Positives = 141/314 (44%), Gaps = 18/314 (5%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           +  G K +E  YT ++    +  +      LL++M+ D C PN  TYN LI    +   +
Sbjct: 501 KAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEGLCKEKKM 560

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
            EA  +  +M  +G +P  VTY  LI    K G  D A+ ++  M + G  PD  TY+  
Sbjct: 561 KEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKVFNHMVSLGYQPDVCTYTAF 620

Query: 472 INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF 531
           ++     G L+    +  +M  +G +P+LVTY ++I   A+      A    + M + G 
Sbjct: 621 LHAYFSQGMLEEVDDVIAKMNEEGILPDLVTYTVLIDGYARLGLTHRAFDFLKCMVDTGC 680

Query: 532 EPDKVTYSIVMEVLGHCGYLDE------------------AEAVFAEMRRKNWVPDEPVY 573
           +P     SI+++ L H   + E                  A  +F +M       D  +Y
Sbjct: 681 KPSLYIVSILIKNLSHENRMKETRSEIGIDSVSNTLEYEIALKLFEKMVEHGCTIDVSIY 740

Query: 574 GLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLN 633
           G L+  + +   + +A      M + G+ P+    NSLL    ++G  ++A  L+  M+ 
Sbjct: 741 GALIAGFCQQERLEEAQGLVHHMKERGMSPSEDIYNSLLDCCCKLGVYAEAVRLVDAMVE 800

Query: 634 LGLKPSLQTYTLLL 647
            GL P L++Y LL+
Sbjct: 801 NGLLPLLESYKLLV 814



 Score =  113 bits (283), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 79/295 (26%), Positives = 130/295 (44%), Gaps = 18/295 (6%)

Query: 359 DEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVF 418
           + +TY  ++  L + ++    + L+ +M+  G +P VVTY  LI    +    + AL VF
Sbjct: 543 NSYTYNVLIEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKVF 602

Query: 419 KQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKA 478
             M  +G +PD  TY   +  +   G L+   D+  KM   G+ PD  TY+V+I+   + 
Sbjct: 603 NHMVSLGYQPDVCTYTAFLHAYFSQGMLEEVDDVIAKMNEEGILPDLVTYTVLIDGYARL 662

Query: 479 GHLQAAHQLFCEMVNQGCIPNLVTYNIMIA-LQAKAR-----------------NYQSAL 520
           G    A      MV+ GC P+L   +I+I  L  + R                  Y+ AL
Sbjct: 663 GLTHRAFDFLKCMVDTGCKPSLYIVSILIKNLSHENRMKETRSEIGIDSVSNTLEYEIAL 722

Query: 521 KLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLW 580
           KL+  M   G   D   Y  ++        L+EA+ +   M+ +   P E +Y  L+D  
Sbjct: 723 KLFEKMVEHGCTIDVSIYGALIAGFCQQERLEEAQGLVHHMKERGMSPSEDIYNSLLDCC 782

Query: 581 GKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLG 635
            K G   +A    +AM++ GL P + +   L+      G    A  +  G+L+ G
Sbjct: 783 CKLGVYAEAVRLVDAMVENGLLPLLESYKLLVCGLYIEGSNEKAKAVFHGLLSCG 837



 Score = 84.7 bits (208), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 79/316 (25%), Positives = 125/316 (39%), Gaps = 53/316 (16%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           G K    TYT ++G + +   F    K+ + MV  G QP+V TY   +H+Y     L E 
Sbjct: 574 GVKPTVVTYTILIGEMLKDGAFDHALKVFNHMVSLGYQPDVCTYTAFLHAYFSQGMLEEV 633

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAG-------FL--------------------- 446
            DV  +M   G  PD VTY  LID +A+ G       FL                     
Sbjct: 634 DDVIAKMNEEGILPDLVTYTVLIDGYARLGLTHRAFDFLKCMVDTGCKPSLYIVSILIKN 693

Query: 447 -------------------------DVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHL 481
                                    ++A+ +++KM   G + D   Y  +I    +   L
Sbjct: 694 LSHENRMKETRSEIGIDSVSNTLEYEIALKLFEKMVEHGCTIDVSIYGALIAGFCQQERL 753

Query: 482 QAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIV 541
           + A  L   M  +G  P+   YN ++    K   Y  A++L   M   G  P   +Y ++
Sbjct: 754 EEAQGLVHHMKERGMSPSEDIYNSLLDCCCKLGVYAEAVRLVDAMVENGLLPLLESYKLL 813

Query: 542 MEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGL 601
           +  L   G  ++A+AVF  +    +  DE  + +L+D   K   V +  E  + M + G 
Sbjct: 814 VCGLYIEGSNEKAKAVFHGLLSCGYNYDEVAWKVLIDGLLKRDLVDECSELIDIMEEKGC 873

Query: 602 RPNVPTCNSLLSAFLR 617
           +PN  T + L+    R
Sbjct: 874 QPNPLTYSLLIEGLER 889



 Score = 73.2 bits (178), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 66/279 (23%), Positives = 119/279 (42%), Gaps = 39/279 (13%)

Query: 325 MDAYQANQVLKQLQDHTVALGFFNWLRRQAGFKHDEHTYTTMV------GILGRARQFGA 378
           + AY +  +L+++ D    +        + G   D  TYT ++      G+  RA  F  
Sbjct: 621 LHAYFSQGMLEEVDDVIAKMN-------EEGILPDLVTYTVLIDGYARLGLTHRAFDF-- 671

Query: 379 INKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNE------------------ALDVFKQ 420
               L  MV  GC+P++   + LI +    N + E                  AL +F++
Sbjct: 672 ----LKCMVDTGCKPSLYIVSILIKNLSHENRMKETRSEIGIDSVSNTLEYEIALKLFEK 727

Query: 421 MQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGH 480
           M   GC  D   Y  LI    +   L+ A  +   M+  G+SP    Y+ +++C  K G 
Sbjct: 728 MVEHGCTIDVSIYGALIAGFCQQERLEEAQGLVHHMKERGMSPSEDIYNSLLDCCCKLGV 787

Query: 481 LQAAHQLFCEMVNQGCIPNLVTYNIMIA-LQAKARNYQSALKLYRDMQNAGFEPDKVTYS 539
              A +L   MV  G +P L +Y +++  L  +  N + A  ++  + + G+  D+V + 
Sbjct: 788 YAEAVRLVDAMVENGLLPLLESYKLLVCGLYIEGSN-EKAKAVFHGLLSCGYNYDEVAWK 846

Query: 540 IVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVD 578
           ++++ L     +DE   +   M  K   P+   Y LL++
Sbjct: 847 VLIDGLLKRDLVDECSELIDIMEEKGCQPNPLTYSLLIE 885


>gi|218197600|gb|EEC80027.1| hypothetical protein OsI_21710 [Oryza sativa Indica Group]
          Length = 694

 Score =  166 bits (419), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 136/475 (28%), Positives = 220/475 (46%), Gaps = 40/475 (8%)

Query: 348 NWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGR 407
           + +R +   K +  T+ +MV  L +A +     K+ D+MVR+G  P+VV+YN L+  Y +
Sbjct: 211 SLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCK 270

Query: 408 ANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFT 467
              L+E+L VF +M   G  PD VT+ +LI    KAG L+ A+ +  +M+  GL  +  T
Sbjct: 271 VGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVT 330

Query: 468 YSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQ 527
           ++ +I+   K G L  A     EM   G  P++V YN +I    K      A +L R+M+
Sbjct: 331 FTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREME 390

Query: 528 NAGFEPDKVTYSIVMEVLGHC--GYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGN 585
               +PD VTYS ++   G+C  G LD A  +  +M +K  +PD   Y  L+    +   
Sbjct: 391 AKRVKPDVVTYSTIIS--GYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKR 448

Query: 586 VRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTL 645
           +  A E +E MLQ G++P+  T  +L+    + G +  A  L   M+  G+ P + TY++
Sbjct: 449 LNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSV 508

Query: 646 LLSCCTEARSPYDMGFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSED 705
           L++  +++    +              AH  L  +    P   N++     +  +M    
Sbjct: 509 LINGLSKSARTKE--------------AHRLLFKLYHEDPVPDNIK-----YDALMLCCS 549

Query: 706 RESKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAVKEKGMSYWLINLHVMSDGT 765
           +   + +V  +  F  K GL +EA  V++    +N   D       S + I +H    G 
Sbjct: 550 KAEFKSVVALLKGFCMK-GLMKEADKVYQSMLDRNWKLDG------SVYSILIHGHCRGG 602

Query: 766 AVIALSRTLAWFRKQMLISGVGP---SRIDIVTGWGRRSRVTGTSLVRQAVQELL 817
            V    R    F KQML SG  P   S I +V G      V        A+Q+LL
Sbjct: 603 NV----RKALSFHKQMLRSGFSPNSTSTISLVRGLFEEGMVVEAD---NAIQDLL 650



 Score =  152 bits (383), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 85/269 (31%), Positives = 149/269 (55%), Gaps = 1/269 (0%)

Query: 381 KLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIH 440
           + L  M+R G  PNV TYN L+ +      L EA+ V   M+  GC P+ VTY TL+   
Sbjct: 138 RFLSSMLRHGVAPNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAF 197

Query: 441 AKAGFLDVAMDMYKKMQAAG-LSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPN 499
            +AG LD A  +   M+  G   P+  T++ ++N L KAG ++ A ++F EMV +G  P+
Sbjct: 198 CRAGELDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPD 257

Query: 500 LVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFA 559
           +V+YN +++   K      +L ++ +M   G  PD VT++ ++      G L++A A+ A
Sbjct: 258 VVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVA 317

Query: 560 EMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVG 619
           +MR +    +E  +  L+D + K G +  A    E M + G++P+V   N+L++ + ++G
Sbjct: 318 QMRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLG 377

Query: 620 QLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
           ++  A  L++ M    +KP + TY+ ++S
Sbjct: 378 RMDLARELIREMEAKRVKPDVVTYSTIIS 406



 Score =  108 bits (269), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 80/300 (26%), Positives = 138/300 (46%), Gaps = 54/300 (18%)

Query: 357 KHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALD 416
           K D  TY+T++    +     +  +L  +M++ G  P+ +TY+ LI        LN+A +
Sbjct: 395 KPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACE 454

Query: 417 VFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLG 476
           +F+ M  +G +PD  TY TLID H K G ++ A+ ++ +M   G+ PD  TYSV+IN L 
Sbjct: 455 LFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLS 514

Query: 477 KAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARN---------------YQSALK 521
           K+   + AH+L  ++ ++  +P+ + Y+ ++   +KA                  + A K
Sbjct: 515 KSARTKEAHRLLFKLYHEDPVPDNIKYDALMLCCSKAEFKSVVALLKGFCMKGLMKEADK 574

Query: 522 LYRDMQNAGFEPDKVTYSIVMEVLGHC--GYLDEAEAVFAEMRRKNWVPDEP-----VYG 574
           +Y+ M +  ++ D   YSI++   GHC  G + +A +   +M R  + P+       V G
Sbjct: 575 VYQSMLDRNWKLDGSVYSILIH--GHCRGGNVRKALSFHKQMLRSGFSPNSTSTISLVRG 632

Query: 575 L------------------------------LVDLWGKAGNVRKAWEWYEAMLQAGLRPN 604
           L                              L+DL  K GNV    +    M + GL P+
Sbjct: 633 LFEEGMVVEADNAIQDLLTCCPLADAEASKALIDLNRKEGNVDALIDVLCGMARDGLLPS 692


>gi|307103654|gb|EFN51912.1| hypothetical protein CHLNCDRAFT_59068 [Chlorella variabilis]
          Length = 1025

 Score =  166 bits (419), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 112/369 (30%), Positives = 181/369 (49%), Gaps = 49/369 (13%)

Query: 297 VVESVSRILRQWKWGPLAEEALGNTNYSMDAYQANQVLKQLQDH---TVALGFFNWLRRQ 353
            VE +  ++R+      A +A+G   Y  D+     +LK+L        A   F+WLR  
Sbjct: 124 TVEDLLEVVRRLPPEASAVKAIGQGLYYFDSGALAALLKELNKSGHVRRAQELFDWLR-- 181

Query: 354 AGF--KHDEH------TYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSY 405
            G    HD +      TYTTM+   G  +Q     +L+ +M   G Q NV TY+ L++  
Sbjct: 182 -GLDDSHDLYPLCNTMTYTTMISQCGTQQQLRRALELVAEMRSRGIQCNVHTYSALMNVC 240

Query: 406 GRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAG-------FLDV---------- 448
            + N L+ ALDV++QM   GC P+ VTY TLID++ K G        LD           
Sbjct: 241 IKGNELDLALDVYRQMLAEGCTPNLVTYNTLIDVYGKTGAWEEAIRVLDALERQGIDPEI 300

Query: 449 ------------------AMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCE 490
                             A+ +Y++M AAG  P   TY+ +I+  GK G L  A Q+F +
Sbjct: 301 RTYNTVIIACNMSGQAQEALRIYERMLAAGAQPTATTYTALISAYGKNGQLDRALQIFQD 360

Query: 491 MVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGY 550
           MV +GC  N++TY+ +I+   KA  ++ AL+L+R+M   G  P+ VTY+ ++        
Sbjct: 361 MVRRGCERNVITYSSLISACEKAGRWELALELFREMHTEGCRPNVVTYNSLIAACAQGAQ 420

Query: 551 LDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNS 610
            ++A+ +F +M+ +   PD   +G L+  + +AG+ R+A   +E M     RP+    N+
Sbjct: 421 WEKAQEMFEQMQHRGCKPDAVTFGGLIAAYDRAGHWRRALTAFEQMKAHNCRPDSVVYNT 480

Query: 611 LLSAFLRVG 619
           ++ A  + G
Sbjct: 481 IVGALWKTG 489



 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 74/225 (32%), Positives = 119/225 (52%)

Query: 362 TYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQM 421
           TY T++ + G+   +    ++LD + R G  P + TYN +I +   +    EAL ++++M
Sbjct: 267 TYNTLIDVYGKTGAWEEAIRVLDALERQGIDPEIRTYNTVIIACNMSGQAQEALRIYERM 326

Query: 422 QVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHL 481
              G +P   TY  LI  + K G LD A+ +++ M   G   +  TYS +I+   KAG  
Sbjct: 327 LAAGAQPTATTYTALISAYGKNGQLDRALQIFQDMVRRGCERNVITYSSLISACEKAGRW 386

Query: 482 QAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIV 541
           + A +LF EM  +GC PN+VTYN +IA  A+   ++ A +++  MQ+ G +PD VT+  +
Sbjct: 387 ELALELFREMHTEGCRPNVVTYNSLIAACAQGAQWEKAQEMFEQMQHRGCKPDAVTFGGL 446

Query: 542 MEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNV 586
           +      G+   A   F +M+  N  PD  VY  +V    K G V
Sbjct: 447 IAAYDRAGHWRRALTAFEQMKAHNCRPDSVVYNTIVGALWKTGLV 491



 Score =  138 bits (348), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 81/255 (31%), Positives = 130/255 (50%)

Query: 394 NVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMY 453
           N +TY  +I   G    L  AL++  +M+  G + +  TY  L+++  K   LD+A+D+Y
Sbjct: 194 NTMTYTTMISQCGTQQQLRRALELVAEMRSRGIQCNVHTYSALMNVCIKGNELDLALDVY 253

Query: 454 KKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKA 513
           ++M A G +P+  TY+ +I+  GK G  + A ++   +  QG  P + TYN +I     +
Sbjct: 254 RQMLAEGCTPNLVTYNTLIDVYGKTGAWEEAIRVLDALERQGIDPEIRTYNTVIIACNMS 313

Query: 514 RNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVY 573
              Q AL++Y  M  AG +P   TY+ ++   G  G LD A  +F +M R+    +   Y
Sbjct: 314 GQAQEALRIYERMLAAGAQPTATTYTALISAYGKNGQLDRALQIFQDMVRRGCERNVITY 373

Query: 574 GLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLN 633
             L+    KAG    A E +  M   G RPNV T NSL++A  +  Q   A  + + M +
Sbjct: 374 SSLISACEKAGRWELALELFREMHTEGCRPNVVTYNSLIAACAQGAQWEKAQEMFEQMQH 433

Query: 634 LGLKPSLQTYTLLLS 648
            G KP   T+  L++
Sbjct: 434 RGCKPDAVTFGGLIA 448



 Score = 57.8 bits (138), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 64/281 (22%), Positives = 120/281 (42%), Gaps = 52/281 (18%)

Query: 464 DTFTYSVIINCLGKAGHLQAAHQLFCEMV----NQGCIP--NLVTYNIMIALQAKARNYQ 517
           D+   + ++  L K+GH++ A +LF  +     +    P  N +TY  MI+     +  +
Sbjct: 153 DSGALAALLKELNKSGHVRRAQELFDWLRGLDDSHDLYPLCNTMTYTTMISQCGTQQQLR 212

Query: 518 SALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLV 577
            AL+L  +M++ G + +  TYS +M V                           + G  +
Sbjct: 213 RALELVAEMRSRGIQCNVHTYSALMNVC--------------------------IKGNEL 246

Query: 578 DLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLK 637
           DL         A + Y  ML  G  PN+ T N+L+  + + G   +A  +L  +   G+ 
Sbjct: 247 DL---------ALDVYRQMLAEGCTPNLVTYNTLIDVYGKTGAWEEAIRVLDALERQGID 297

Query: 638 PSLQTY-TLLLSCCTEARSPYDMGFCHELMAVSGHP-AHMFLLSMPSPGPDGQNVRDHVG 695
           P ++TY T++++C    ++   +     ++A    P A  +   + + G +GQ  R  + 
Sbjct: 298 PEIRTYNTVIIACNMSGQAQEALRIYERMLAAGAQPTATTYTALISAYGKNGQLDR-ALQ 356

Query: 696 SFLEMMHSEDRESKRGLVDAVVDFLHKSGLKEEAGSVWEVA 736
            F +M+       +RG    V+ +       E+AG  WE+A
Sbjct: 357 IFQDMV-------RRGCERNVITYSSLISACEKAGR-WELA 389


>gi|302762673|ref|XP_002964758.1| hypothetical protein SELMODRAFT_82857 [Selaginella moellendorffii]
 gi|300166991|gb|EFJ33596.1| hypothetical protein SELMODRAFT_82857 [Selaginella moellendorffii]
          Length = 552

 Score =  166 bits (419), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 114/407 (28%), Positives = 188/407 (46%), Gaps = 3/407 (0%)

Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLI 402
           AL  ++ +    GF+    TY+T++  L R  +     KLL++M   GC PN VTYN L+
Sbjct: 84  ALTLYDDMAIHFGFRPTVVTYSTLIDGLCRDHEVDKGCKLLEEMAGRGCAPNAVTYNTLV 143

Query: 403 HSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKK--MQAAG 460
           ++        EA  + +QM   GC P+ +T+  +I    K G ++ A  +  +  M  +G
Sbjct: 144 NALLGQGRSKEAFSLLEQMAANGCPPELITFGLIIKGLCKEGEIEAAFRVVDEMFMIESG 203

Query: 461 LSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSAL 520
           LSPD  T++ +++ L K   +  AH +F   + +GC PN+VTY+ +I   +K      AL
Sbjct: 204 LSPDVITFNSVLDGLCKEQRILDAHNVFKRALERGCRPNVVTYSTLIDGLSKMAKMDEAL 263

Query: 521 KLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLW 580
           +L   M   G   + VTYS V++ L   G +++A  V  +MR    +PD   Y  L+D +
Sbjct: 264 QLLAKMVELGCRANTVTYSTVVDGLLKVGRMEDAVVVLRQMRDAGCLPDAVTYNTLIDGF 323

Query: 581 GKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSL 640
            K   +R+A      ML+AG  P+V T  +L     R G+  +A  +L  M   G  P+ 
Sbjct: 324 FKRQRLREAVGLLREMLEAGFHPSVVTYTTLCHGLCRSGRFDEAVEILDYMAARGCAPNA 383

Query: 641 QTYTLLLS-CCTEARSPYDMGFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLE 699
            TY+ ++   C   R    +G+  ++        H+   S    G       D    FLE
Sbjct: 384 ITYSSIVDGLCKAGRVTEALGYFEKMARDEVVAPHVIAYSALIDGLCKAGKIDEAYEFLE 443

Query: 700 MMHSEDRESKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAV 746
            M    R         +++ L  +G  +    ++   A++   PD V
Sbjct: 444 RMIRAGRIPDVVTFSILINGLCDAGRIDTGLELFRGMAERGCVPDMV 490



 Score =  151 bits (381), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 102/357 (28%), Positives = 173/357 (48%), Gaps = 19/357 (5%)

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
           ++G   D  T+ +++  L + ++    + +  + +  GC+PNVVTY+ LI    +   ++
Sbjct: 201 ESGLSPDVITFNSVLDGLCKEQRILDAHNVFKRALERGCRPNVVTYSTLIDGLSKMAKMD 260

Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
           EAL +  +M  +GC  + VTY T++D   K G ++ A+ + ++M+ AG  PD  TY+ +I
Sbjct: 261 EALQLLAKMVELGCRANTVTYSTVVDGLLKVGRMEDAVVVLRQMRDAGCLPDAVTYNTLI 320

Query: 473 NCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFE 532
           +   K   L+ A  L  EM+  G  P++VTY  +     ++  +  A+++   M   G  
Sbjct: 321 DGFFKRQRLREAVGLLREMLEAGFHPSVVTYTTLCHGLCRSGRFDEAVEILDYMAARGCA 380

Query: 533 PDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWV-PDEPVYGLLVDLWGKAGNVRKAWE 591
           P+ +TYS +++ L   G + EA   F +M R   V P    Y  L+D   KAG + +A+E
Sbjct: 381 PNAITYSSIVDGLCKAGRVTEALGYFEKMARDEVVAPHVIAYSALIDGLCKAGKIDEAYE 440

Query: 592 WYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTY-TLLLSCC 650
           + E M++AG  P+V T + L++     G++     L +GM   G  P + TY TL+   C
Sbjct: 441 FLERMIRAGRIPDVVTFSILINGLCDAGRIDTGLELFRGMAERGCVPDMVTYATLVDRLC 500

Query: 651 TEARSPYDMGFCHELMAVSGHPAHMFLLSMPSPG--PDGQNVRDHVGSFLEMMHSED 705
             +R                  A      M S G  PD    R  +   LE+   ED
Sbjct: 501 RASRV---------------DEAFDLFQQMRSDGLSPDRSTRRTMIHGLLEVNRDED 542



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 93/326 (28%), Positives = 156/326 (47%), Gaps = 3/326 (0%)

Query: 320 NTNYSMDAYQANQVLKQLQDHTVALGFFNWLRR--QAGFKHDEHTYTTMVGILGRARQFG 377
            +  S D    N VL  L      L   N  +R  + G + +  TY+T++  L +  +  
Sbjct: 201 ESGLSPDVITFNSVLDGLCKEQRILDAHNVFKRALERGCRPNVVTYSTLIDGLSKMAKMD 260

Query: 378 AINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLI 437
              +LL +MV  GC+ N VTY+ ++    +   + +A+ V +QM+  GC PD VTY TLI
Sbjct: 261 EALQLLAKMVELGCRANTVTYSTVVDGLLKVGRMEDAVVVLRQMRDAGCLPDAVTYNTLI 320

Query: 438 DIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCI 497
           D   K   L  A+ + ++M  AG  P   TY+ + + L ++G    A ++   M  +GC 
Sbjct: 321 DGFFKRQRLREAVGLLREMLEAGFHPSVVTYTTLCHGLCRSGRFDEAVEILDYMAARGCA 380

Query: 498 PNLVTYNIMIALQAKARNYQSALKLYRDM-QNAGFEPDKVTYSIVMEVLGHCGYLDEAEA 556
           PN +TY+ ++    KA     AL  +  M ++    P  + YS +++ L   G +DEA  
Sbjct: 381 PNAITYSSIVDGLCKAGRVTEALGYFEKMARDEVVAPHVIAYSALIDGLCKAGKIDEAYE 440

Query: 557 VFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFL 616
               M R   +PD   + +L++    AG +    E +  M + G  P++ T  +L+    
Sbjct: 441 FLERMIRAGRIPDVVTFSILINGLCDAGRIDTGLELFRGMAERGCVPDMVTYATLVDRLC 500

Query: 617 RVGQLSDAYHLLQGMLNLGLKPSLQT 642
           R  ++ +A+ L Q M + GL P   T
Sbjct: 501 RASRVDEAFDLFQQMRSDGLSPDRST 526



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 108/392 (27%), Positives = 183/392 (46%), Gaps = 19/392 (4%)

Query: 366 MVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVG 425
           M+  L ++R+      L  QMV     P+VVTY  LI   G+   + EA D+F++ +  G
Sbjct: 1   MIDGLCKSRKVDKAITLFKQMVDKAIYPDVVTYGALIDGLGKQRRVKEAYDLFEEARAKG 60

Query: 426 CEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQA-AGLSPDTFTYSVIINCLGKAGHLQAA 484
           C P  VTY T+ID   K G ++ A+ +Y  M    G  P   TYS +I+ L +   +   
Sbjct: 61  CHPTVVTYNTMIDGLCKCGRIENALTLYDDMAIHFGFRPTVVTYSTLIDGLCRDHEVDKG 120

Query: 485 HQLFCEMVNQGCIPNLVTYNIMI-ALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVME 543
            +L  EM  +GC PN VTYN ++ AL  + R+ + A  L   M   G  P+ +T+ ++++
Sbjct: 121 CKLLEEMAGRGCAPNAVTYNTLVNALLGQGRS-KEAFSLLEQMAANGCPPELITFGLIIK 179

Query: 544 VLGHCGYLDEAEAVFAE--MRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGL 601
            L   G ++ A  V  E  M      PD   +  ++D   K   +  A   ++  L+ G 
Sbjct: 180 GLCKEGEIEAAFRVVDEMFMIESGLSPDVITFNSVLDGLCKEQRILDAHNVFKRALERGC 239

Query: 602 RPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGF 661
           RPNV T ++L+    ++ ++ +A  LL  M+ LG + +  TY+ ++    +     D   
Sbjct: 240 RPNVVTYSTLIDGLSKMAKMDEALQLLAKMVELGCRANTVTYSTVVDGLLKVGRMEDAVV 299

Query: 662 CHELMAVSGH-PAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRESKRGLVDAVVDF- 719
               M  +G  P  +   ++       Q +R+ VG   EM+ +       G   +VV + 
Sbjct: 300 VLRQMRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLREMLEA-------GFHPSVVTYT 352

Query: 720 -----LHKSGLKEEAGSVWEVAAQKNVYPDAV 746
                L +SG  +EA  + +  A +   P+A+
Sbjct: 353 TLCHGLCRSGRFDEAVEILDYMAARGCAPNAI 384



 Score =  139 bits (349), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 106/409 (25%), Positives = 184/409 (44%), Gaps = 18/409 (4%)

Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLI 402
           A+  F  +  +A +  D  TY  ++  LG+ R+      L ++    GC P VVTYN +I
Sbjct: 14  AITLFKQMVDKAIYP-DVVTYGALIDGLGKQRRVKEAYDLFEEARAKGCHPTVVTYNTMI 72

Query: 403 HSYGRANYLNEALDVFKQMQV-VGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGL 461
               +   +  AL ++  M +  G  P  VTY TLID   +   +D    + ++M   G 
Sbjct: 73  DGLCKCGRIENALTLYDDMAIHFGFRPTVVTYSTLIDGLCRDHEVDKGCKLLEEMAGRGC 132

Query: 462 SPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALK 521
           +P+  TY+ ++N L   G  + A  L  +M   GC P L+T+ ++I    K    ++A +
Sbjct: 133 APNAVTYNTLVNALLGQGRSKEAFSLLEQMAANGCPPELITFGLIIKGLCKEGEIEAAFR 192

Query: 522 LYRD--MQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDL 579
           +  +  M  +G  PD +T++ V++ L     + +A  VF     +   P+   Y  L+D 
Sbjct: 193 VVDEMFMIESGLSPDVITFNSVLDGLCKEQRILDAHNVFKRALERGCRPNVVTYSTLIDG 252

Query: 580 WGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPS 639
             K   + +A +    M++ G R N  T ++++   L+VG++ DA  +L+ M + G  P 
Sbjct: 253 LSKMAKMDEALQLLAKMVELGCRANTVTYSTVVDGLLKVGRMEDAVVVLRQMRDAGCLPD 312

Query: 640 LQTY-TLLLSCCTEARSPYDMGFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFL 698
             TY TL+       R    +G   E++    HP+ +   ++              G F 
Sbjct: 313 AVTYNTLIDGFFKRQRLREAVGLLREMLEAGFHPSVVTYTTLCHGLC-------RSGRFD 365

Query: 699 EMMHSEDRESKRGLV------DAVVDFLHKSGLKEEAGSVWEVAAQKNV 741
           E +   D  + RG         ++VD L K+G   EA   +E  A+  V
Sbjct: 366 EAVEILDYMAARGCAPNAITYSSIVDGLCKAGRVTEALGYFEKMARDEV 414



 Score =  129 bits (325), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 78/232 (33%), Positives = 124/232 (53%), Gaps = 8/232 (3%)

Query: 352 RQAGFKHDEHTYTTMV-GILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANY 410
           R AG   D  TY T++ G   R R   A+  LL +M+  G  P+VVTY  L H   R+  
Sbjct: 305 RDAGCLPDAVTYNTLIDGFFKRQRLREAVG-LLREMLEAGFHPSVVTYTTLCHGLCRSGR 363

Query: 411 LNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKM-QAAGLSPDTFTYS 469
            +EA+++   M   GC P+ +TY +++D   KAG +  A+  ++KM +   ++P    YS
Sbjct: 364 FDEAVEILDYMAARGCAPNAITYSSIVDGLCKAGRVTEALGYFEKMARDEVVAPHVIAYS 423

Query: 470 VIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNA 529
            +I+ L KAG +  A++    M+  G IP++VT++I+I     A    + L+L+R M   
Sbjct: 424 ALIDGLCKAGKIDEAYEFLERMIRAGRIPDVVTFSILINGLCDAGRIDTGLELFRGMAER 483

Query: 530 GFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEP-----VYGLL 576
           G  PD VTY+ +++ L     +DEA  +F +MR     PD       ++GLL
Sbjct: 484 GCVPDMVTYATLVDRLCRASRVDEAFDLFQQMRSDGLSPDRSTRRTMIHGLL 535



 Score =  107 bits (266), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 94/363 (25%), Positives = 150/363 (41%), Gaps = 13/363 (3%)

Query: 436 LIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQG 495
           +ID   K+  +D A+ ++K+M    + PD  TY  +I+ LGK   ++ A+ LF E   +G
Sbjct: 1   MIDGLCKSRKVDKAITLFKQMVDKAIYPDVVTYGALIDGLGKQRRVKEAYDLFEEARAKG 60

Query: 496 CIPNLVTYNIMIALQAKARNYQSALKLYRDMQ-NAGFEPDKVTYSIVMEVLGHCGYLDEA 554
           C P +VTYN MI    K    ++AL LY DM  + GF P  VTYS +++ L     +D+ 
Sbjct: 61  CHPTVVTYNTMIDGLCKCGRIENALTLYDDMAIHFGFRPTVVTYSTLIDGLCRDHEVDKG 120

Query: 555 EAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSA 614
             +  EM  +   P+   Y  LV+     G  ++A+   E M   G  P + T   ++  
Sbjct: 121 CKLLEEMAGRGCAPNAVTYNTLVNALLGQGRSKEAFSLLEQMAANGCPPELITFGLIIKG 180

Query: 615 FLRVGQLSDAYHLLQGMLNL--GLKPSLQTYTLLLSCCTEARSPYDMGFCHELMAVSGHP 672
             + G++  A+ ++  M  +  GL P + T+  +L    + +   D     +     G  
Sbjct: 181 LCKEGEIEAAFRVVDEMFMIESGLSPDVITFNSVLDGLCKEQRILDAHNVFKRALERGCR 240

Query: 673 AHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRESKRGLVDAVVDFLHKSGLKEEAGSV 732
            ++   S    G       D     L  M      +       VVD L K G  E+A  V
Sbjct: 241 PNVVTYSTLIDGLSKMAKMDEALQLLAKMVELGCRANTVTYSTVVDGLLKVGRMEDAVVV 300

Query: 733 WEVAAQKNVYPDAVKEKGMSYWLINLHVMSDGTAVIALSRTLAWFRKQMLISGVGPSRID 792
                     PDAV            + + DG       R      ++ML +G  PS + 
Sbjct: 301 LRQMRDAGCLPDAV----------TYNTLIDGFFKRQRLREAVGLLREMLEAGFHPSVVT 350

Query: 793 IVT 795
             T
Sbjct: 351 YTT 353



 Score = 84.0 bits (206), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 46/135 (34%), Positives = 77/135 (57%)

Query: 341 TVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNR 400
           T ALG+F  + R          Y+ ++  L +A +     + L++M+R G  P+VVT++ 
Sbjct: 400 TEALGYFEKMARDEVVAPHVIAYSALIDGLCKAGKIDEAYEFLERMIRAGRIPDVVTFSI 459

Query: 401 LIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAG 460
           LI+    A  ++  L++F+ M   GC PD VTY TL+D   +A  +D A D++++M++ G
Sbjct: 460 LINGLCDAGRIDTGLELFRGMAERGCVPDMVTYATLVDRLCRASRVDEAFDLFQQMRSDG 519

Query: 461 LSPDTFTYSVIINCL 475
           LSPD  T   +I+ L
Sbjct: 520 LSPDRSTRRTMIHGL 534


>gi|224093190|ref|XP_002309826.1| predicted protein [Populus trichocarpa]
 gi|222852729|gb|EEE90276.1| predicted protein [Populus trichocarpa]
          Length = 1480

 Score =  165 bits (418), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 97/316 (30%), Positives = 167/316 (52%), Gaps = 8/316 (2%)

Query: 350 LRRQAGFKHDEHTYTTMVGILGRARQFGAIN-----KLLDQMVRDGCQPNVVTYNRLIHS 404
           L R+ G K D  ++ T++    +A   GA+      +LL+++ R G +P+ +TYN LI +
Sbjct: 279 LMRERGCKPDLVSFNTLINARLKA---GAMMPNLAIELLNEVRRSGLRPDTITYNTLISA 335

Query: 405 YGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPD 464
             RA+ L EA  VF  M+   C+PD  TY  +I ++ + G    A  ++  +++ G  PD
Sbjct: 336 CSRASNLEEAAKVFDDMEAHHCQPDLWTYNAMISVYGRCGLSGKAEQLFNDLESRGFFPD 395

Query: 465 TFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYR 524
             +Y+ ++    + G+++   +++ EMV  G   + +TYN MI +  K    + AL+LYR
Sbjct: 396 AVSYNSLLYAFAREGNVEKVKEIWEEMVKIGFGKDEMTYNTMIHMYGKQGQNELALQLYR 455

Query: 525 DMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAG 584
           DMQ++G  PD VTY+++++ LG    + EA  V +EM      P    Y  L+  + KAG
Sbjct: 456 DMQSSGRNPDAVTYTVLIDSLGKTNKIAEAAGVMSEMLNTGVKPTLKTYSALICGYAKAG 515

Query: 585 NVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYT 644
              +A E ++ ML++G+RP+    + +L   LR  +   A  L + ML+ G+      Y 
Sbjct: 516 KPVEAEETFDCMLRSGIRPDHLAYSVMLDIHLRFNEPKRAMTLYKEMLHDGITLDHSLYE 575

Query: 645 LLLSCCTEARSPYDMG 660
           L+L    +     D+G
Sbjct: 576 LMLRTLRKVNKVEDIG 591



 Score =  163 bits (413), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 94/337 (27%), Positives = 181/337 (53%), Gaps = 6/337 (1%)

Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVV-TYNRL 401
           AL  + WL  +  +  +    +T++ +LG+A Q     ++   M  +    N V  YN +
Sbjct: 203 ALEVYEWLNLRHWYSPNARMLSTILSVLGKANQEALAVEVF--MRAEPSAGNTVQVYNAM 260

Query: 402 IHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFL--DVAMDMYKKMQAA 459
           +  Y R    N+  ++   M+  GC+PD V++ TLI+   KAG +  ++A+++  +++ +
Sbjct: 261 MGVYARRGRFNKVQELLDLMRERGCKPDLVSFNTLINARLKAGAMMPNLAIELLNEVRRS 320

Query: 460 GLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSA 519
           GL PDT TY+ +I+   +A +L+ A ++F +M    C P+L TYN MI++  +      A
Sbjct: 321 GLRPDTITYNTLISACSRASNLEEAAKVFDDMEAHHCQPDLWTYNAMISVYGRCGLSGKA 380

Query: 520 LKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDL 579
            +L+ D+++ GF PD V+Y+ ++      G +++ + ++ EM +  +  DE  Y  ++ +
Sbjct: 381 EQLFNDLESRGFFPDAVSYNSLLYAFAREGNVEKVKEIWEEMVKIGFGKDEMTYNTMIHM 440

Query: 580 WGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPS 639
           +GK G    A + Y  M  +G  P+  T   L+ +  +  ++++A  ++  MLN G+KP+
Sbjct: 441 YGKQGQNELALQLYRDMQSSGRNPDAVTYTVLIDSLGKTNKIAEAAGVMSEMLNTGVKPT 500

Query: 640 LQTYTLLLSCCTEARSPYDMGFCHELMAVSG-HPAHM 675
           L+TY+ L+    +A  P +     + M  SG  P H+
Sbjct: 501 LKTYSALICGYAKAGKPVEAEETFDCMLRSGIRPDHL 537



 Score =  134 bits (338), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 84/295 (28%), Positives = 142/295 (48%), Gaps = 11/295 (3%)

Query: 342 VALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRL 401
           +A+   N +RR +G + D  TY T++    RA       K+ D M    CQP++ TYN +
Sbjct: 309 LAIELLNEVRR-SGLRPDTITYNTLISACSRASNLEEAAKVFDDMEAHHCQPDLWTYNAM 367

Query: 402 IHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGL 461
           I  YGR     +A  +F  ++  G  PD V+Y +L+   A+ G ++   +++++M   G 
Sbjct: 368 ISVYGRCGLSGKAEQLFNDLESRGFFPDAVSYNSLLYAFAREGNVEKVKEIWEEMVKIGF 427

Query: 462 SPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALK 521
             D  TY+ +I+  GK G  + A QL+ +M + G  P+ VTY ++I    K      A  
Sbjct: 428 GKDEMTYNTMIHMYGKQGQNELALQLYRDMQSSGRNPDAVTYTVLIDSLGKTNKIAEAAG 487

Query: 522 LYRDMQNAGFEPDKVTYSIVMEVLGHCGYLD-----EAEAVFAEMRRKNWVPDEPVYGLL 576
           +  +M N G +P   TYS ++     CGY       EAE  F  M R    PD   Y ++
Sbjct: 488 VMSEMLNTGVKPTLKTYSALI-----CGYAKAGKPVEAEETFDCMLRSGIRPDHLAYSVM 542

Query: 577 VDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGM 631
           +D+  +    ++A   Y+ ML  G+  +      +L    +V ++ D   +++ M
Sbjct: 543 LDIHLRFNEPKRAMTLYKEMLHDGITLDHSLYELMLRTLRKVNKVEDIGRVIRDM 597



 Score =  114 bits (285), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 110/507 (21%), Positives = 213/507 (42%), Gaps = 60/507 (11%)

Query: 352  RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
            + AG+    H Y  M  +L R +Q   +  +L +M   G +P++  +N ++  Y      
Sbjct: 910  KAAGYFPTMHLYRVMARLLSRGKQVRDVEAMLSEMEEAGFKPDLSIWNSVLKMYVAIEDF 969

Query: 412  NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
             + + V+++++  G EPD  TY TLI ++ +    +    +  +M+ AGL P   TY  +
Sbjct: 970  RKTIQVYQRIKEDGLEPDEDTYNTLIVMYCRDHRPEEGFSLMHEMRVAGLEPKLDTYKSL 1029

Query: 472  INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF 531
            +   GK   ++ A +LF E+ ++GC  +   Y+ M+ +   + ++  A +L+  M++AG 
Sbjct: 1030 VASFGKQQLVEQAEELFEELQSKGCKLDRSFYHTMMKIYRNSGSHSKAERLFSMMKDAGV 1089

Query: 532  EPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWE 591
            EP   T  ++M   G  G   EAE V + ++          Y  ++D + + G+     +
Sbjct: 1090 EPTIATMHLLMVSYGSSGQPQEAEKVLSNLKETGSNLSTLPYSSVIDAYLRNGDYNIGIQ 1149

Query: 592  WYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCT 651
                M + GL P+    + + + F+R   LS        +LN     +LQ          
Sbjct: 1150 KLIQMKKEGLEPD----HRIWTCFIRAASLSRRTSEAIVLLN-----ALQ---------- 1190

Query: 652  EARSPYDMGFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRESKRG 711
                  D GF   +  ++  P               +++   +   LEM+ + +  +   
Sbjct: 1191 ------DAGFDLPIRLLTEKP---------------ESLVSALDRCLEMLETLEDNAAFN 1229

Query: 712  LVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYP-DAVKEKGMS-YWLINLHVMSDGTAVIA 769
             V+A+ D L    L+  A  V+++A +K +Y  D  +    S  W       S  + +  
Sbjct: 1230 FVNALEDLLWAFELRATASWVFQLAIKKRIYRHDVFRHADKSNKW------QSSMSPIQM 1283

Query: 770  LSRTLAWF---RKQMLISGV-----GPSRIDIVTGWGRRSRVTGTSLVRQAVQELLHMFS 821
            L+ T+      +K +L + +      P  + ++TG    + V+  S ++  + E+     
Sbjct: 1284 LNVTIQKENNDKKDLLDASLQGCPESPKSVVLITGTAEYNMVSLDSTLKACLWEM----G 1339

Query: 822  FPFFTENGNSGCFVGCGEPLNKWLLQS 848
             PF      SG  +     L  WL  S
Sbjct: 1340 SPFLPCKSRSGLLIAKAHSLRMWLKDS 1366



 Score =  105 bits (263), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 68/296 (22%), Positives = 136/296 (45%)

Query: 352  RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
            RQ     D   +  ++     +  +     + + M+RDG  P V T N L+ +      L
Sbjct: 805  RQRCITVDRKVWNALIEAYAASGCYERARAIFNTMMRDGPSPTVDTINGLLQALIVDGRL 864

Query: 412  NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
            +E   V +++Q +G +  + +   ++D  A+AG +     +Y  M+AAG  P    Y V+
Sbjct: 865  DELYVVVQELQDMGFKISKSSILLMLDAFARAGNIFEVKKIYHGMKAAGYFPTMHLYRVM 924

Query: 472  INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF 531
               L +   ++    +  EM   G  P+L  +N ++ +     +++  +++Y+ ++  G 
Sbjct: 925  ARLLSRGKQVRDVEAMLSEMEEAGFKPDLSIWNSVLKMYVAIEDFRKTIQVYQRIKEDGL 984

Query: 532  EPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWE 591
            EPD+ TY+ ++ +       +E  ++  EMR     P    Y  LV  +GK   V +A E
Sbjct: 985  EPDEDTYNTLIVMYCRDHRPEEGFSLMHEMRVAGLEPKLDTYKSLVASFGKQQLVEQAEE 1044

Query: 592  WYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
             +E +   G + +    ++++  +   G  S A  L   M + G++P++ T  LL+
Sbjct: 1045 LFEELQSKGCKLDRSFYHTMMKIYRNSGSHSKAERLFSMMKDAGVEPTIATMHLLM 1100



 Score =  100 bits (250), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 84/355 (23%), Positives = 146/355 (41%), Gaps = 39/355 (10%)

Query: 346 FFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSY 405
            FN L  + GF  D  +Y +++    R      + ++ ++MV+ G   + +TYN +IH Y
Sbjct: 383 LFNDLESR-GFFPDAVSYNSLLYAFAREGNVEKVKEIWEEMVKIGFGKDEMTYNTMIHMY 441

Query: 406 GRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDT 465
           G+      AL +++ MQ  G  PD VTY  LID   K   +  A  +  +M   G+ P  
Sbjct: 442 GKQGQNELALQLYRDMQSSGRNPDAVTYTVLIDSLGKTNKIAEAAGVMSEMLNTGVKPTL 501

Query: 466 FTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRD 525
            TYS +I    KAG    A + F  M+  G  P+ + Y++M+ +  +    + A+ LY++
Sbjct: 502 KTYSALICGYAKAGKPVEAEETFDCMLRSGIRPDHLAYSVMLDIHLRFNEPKRAMTLYKE 561

Query: 526 MQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLV--DLWGKA 583
           M + G   D   Y +++  L     +++   V  +M     +  + +  +LV  + + +A
Sbjct: 562 MLHDGITLDHSLYELMLRTLRKVNKVEDIGRVIRDMEEICGMNTQTISSILVKGECYDEA 621

Query: 584 -----------------------------GNVRKAWEWYEAMLQAGLRPNVPTCNSLLSA 614
                                        G   +A +  E + +   R +     +L+  
Sbjct: 622 AKMLRRAISDHFEIDRENLLSILSSYSSSGRHAEALDLLEFLKEHSPRSSQMITEALVVM 681

Query: 615 FLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCC------TEARSPY-DMGFC 662
             +  QL  A         LG   S   +  L+ CC      TEA   + DM FC
Sbjct: 682 LCKAQQLDAALKEYSNNRELGFTGSFTMFESLIQCCLENELITEASQVFSDMRFC 736



 Score = 98.6 bits (244), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 73/298 (24%), Positives = 137/298 (45%), Gaps = 1/298 (0%)

Query: 352  RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVT-YNRLIHSYGRANY 410
            R  G K  E  Y +MV +  +       + L+D    DG   N ++ Y  +I +YGR   
Sbjct: 734  RFCGIKASESLYESMVLLYCKMGFPETAHHLIDFAESDGILLNNISLYVNVIEAYGRLKL 793

Query: 411  LNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSV 470
              +A  V   ++      DR  +  LI+ +A +G  + A  ++  M   G SP   T + 
Sbjct: 794  WQKAESVAGNLRQRCITVDRKVWNALIEAYAASGCYERARAIFNTMMRDGPSPTVDTING 853

Query: 471  IINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAG 530
            ++  L   G L   + +  E+ + G   +  +  +M+   A+A N     K+Y  M+ AG
Sbjct: 854  LLQALIVDGRLDELYVVVQELQDMGFKISKSSILLMLDAFARAGNIFEVKKIYHGMKAAG 913

Query: 531  FEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAW 590
            + P    Y ++  +L     + + EA+ +EM    + PD  ++  ++ ++    + RK  
Sbjct: 914  YFPTMHLYRVMARLLSRGKQVRDVEAMLSEMEEAGFKPDLSIWNSVLKMYVAIEDFRKTI 973

Query: 591  EWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
            + Y+ + + GL P+  T N+L+  + R  +  + + L+  M   GL+P L TY  L++
Sbjct: 974  QVYQRIKEDGLEPDEDTYNTLIVMYCRDHRPEEGFSLMHEMRVAGLEPKLDTYKSLVA 1031



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 72/298 (24%), Positives = 133/298 (44%), Gaps = 7/298 (2%)

Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
           EALD+ + ++       ++    L+ +  KA  LD A+  Y   +  G +     +  +I
Sbjct: 655 EALDLLEFLKEHSPRSSQMITEALVVMLCKAQQLDAALKEYSNNRELGFTGSFTMFESLI 714

Query: 473 NCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFE 532
            C  +   +  A Q+F +M   G   +   Y  M+ L  K    ++A  L    ++ G  
Sbjct: 715 QCCLENELITEASQVFSDMRFCGIKASESLYESMVLLYCKMGFPETAHHLIDFAESDGIL 774

Query: 533 PDKVT-YSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWE 591
            + ++ Y  V+E  G      +AE+V   +R++    D  V+  L++ +  +G   +A  
Sbjct: 775 LNNISLYVNVIEAYGRLKLWQKAESVAGNLRQRCITVDRKVWNALIEAYAASGCYERARA 834

Query: 592 WYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCT 651
            +  M++ G  P V T N LL A +  G+L + Y ++Q + ++G K S  +  L+L    
Sbjct: 835 IFNTMMRDGPSPTVDTINGLLQALIVDGRLDELYVVVQELQDMGFKISKSSILLMLDAFA 894

Query: 652 EARSPYDMGFCHELMAVSGHPAHMFLLS-MPSPGPDGQNVRDHVGSFLEMMHSEDRES 708
            A + +++   +  M  +G+   M L   M      G+ VRD     +E M SE  E+
Sbjct: 895 RAGNIFEVKKIYHGMKAAGYFPTMHLYRVMARLLSRGKQVRD-----VEAMLSEMEEA 947


>gi|356563451|ref|XP_003549976.1| PREDICTED: pentatricopeptide repeat-containing protein At5g46580,
           chloroplastic-like [Glycine max]
          Length = 714

 Score =  165 bits (418), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 124/536 (23%), Positives = 231/536 (43%), Gaps = 43/536 (8%)

Query: 346 FFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSY 405
           F NW+R Q     +   Y   +  L   +QFG I +L  QM+ +G   + +TY+ +I   
Sbjct: 175 FLNWIRTQNLLPMETIFYNVTMKSLRFGKQFGLIEELAHQMIDNGVPLDNITYSTIISCA 234

Query: 406 GRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDT 465
            + N  ++A+  F++M      PD VTY  ++D++A+ G ++  + +Y++ +A G  PD 
Sbjct: 235 KKCNLYDKAVHWFERMYKTSLMPDEVTYSAILDVYARLGKVEEVISLYERGRATGWKPDP 294

Query: 466 FTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIM------------------- 506
            T+SV+    G+AG       +F EM + G  PNLV YN +                   
Sbjct: 295 ITFSVLGKMFGEAGDYDGIRYVFQEMESVGVQPNLVVYNTLLEAMGKAGKPVFARGLFEE 354

Query: 507 ----------------IALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGY 550
                           I +  KAR  + AL+L++ M+  G+  D + Y+ ++ +    G 
Sbjct: 355 MIELGIVPNEKTLTAVIKIYGKARWSRDALELWQRMKENGWPMDFILYNTLLNMCADVGL 414

Query: 551 LDEAEAVFAEMRRK-NWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCN 609
           ++EAE +F +M++  +  PD   Y  +++++G  G+V KA + +  M ++G+  NV    
Sbjct: 415 VEEAETLFRDMKQSAHCKPDSWSYTAMLNIYGSQGDVDKAMKLFNEMCKSGVELNVMGFT 474

Query: 610 SLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGFCHELMAVS 669
            L+    R  +  D   +    +  G+KP  +    LLS  + ++   D       +  +
Sbjct: 475 CLIQCLGRATEFDDLVRVFGISVERGIKPDDRLCGCLLSVVSLSQGSNDEEKVLACLQRA 534

Query: 670 GHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRESKRGLVDAVVDFLHKSGLKEEA 729
                 F+  +       ++V++    F  +M +   E +R   + ++D      L+E A
Sbjct: 535 NPKLVAFIHLIEDEKSSFESVKEE---FKGIMSNAAVEVRRPFCNCLIDICRNKDLRERA 591

Query: 730 GSVWEVAAQKNVYPDAVKEKGMSYWLINLHVMSDGTAVIALSRTLAWFRKQMLISGVGPS 789
             +  +     +YP  +  K  + W +++  +S G A+ AL   +    K +      P 
Sbjct: 592 HELLYLGTLYGLYP-GLHNKTDNEWCLDVRSLSVGAALTALEEWMWTLTKIVKREETLPE 650

Query: 790 RIDIVTGWGRRSRVTGTSLVRQAVQELLHMFSFPFFTENGNSGCFVGCGEPLNKWL 845
                TG G      G ++   +    L   + PF       GCF+   E L  W+
Sbjct: 651 LFLAQTGTGAHKFAQGLNI---SFASHLRKLAAPFKQSEEKIGCFIASREDLVSWV 703



 Score = 93.6 bits (231), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 77/328 (23%), Positives = 147/328 (44%), Gaps = 23/328 (7%)

Query: 291 FASTGNVVESVSRILRQ----WKWGPLAEEALGNTNYSMDAYQANQVLKQLQDHTVALGF 346
           +A  G V E +S   R     WK  P+    LG        Y   + + Q  +       
Sbjct: 269 YARLGKVEEVISLYERGRATGWKPDPITFSVLGKMFGEAGDYDGIRYVFQEME------- 321

Query: 347 FNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYG 406
                   G + +   Y T++  +G+A +      L ++M+  G  PN  T   +I  YG
Sbjct: 322 ------SVGVQPNLVVYNTLLEAMGKAGKPVFARGLFEEMIELGIVPNEKTLTAVIKIYG 375

Query: 407 RANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKM-QAAGLSPDT 465
           +A +  +AL+++++M+  G   D + Y TL+++ A  G ++ A  +++ M Q+A   PD+
Sbjct: 376 KARWSRDALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSAHCKPDS 435

Query: 466 FTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRD 525
           ++Y+ ++N  G  G +  A +LF EM   G   N++ +  +I    +A  +   ++++  
Sbjct: 436 WSYTAMLNIYGSQGDVDKAMKLFNEMCKSGVELNVMGFTCLIQCLGRATEFDDLVRVFGI 495

Query: 526 MQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVY-GLLVDLWGKAG 584
               G +PD      ++ V+      ++ E V A ++R N  P    +  L+ D      
Sbjct: 496 SVERGIKPDDRLCGCLLSVVSLSQGSNDEEKVLACLQRAN--PKLVAFIHLIEDEKSSFE 553

Query: 585 NVRKAWEWYEAMLQAGLRPNVPTCNSLL 612
           +V++  E+   M  A +    P CN L+
Sbjct: 554 SVKE--EFKGIMSNAAVEVRRPFCNCLI 579


>gi|224095732|ref|XP_002310456.1| predicted protein [Populus trichocarpa]
 gi|222853359|gb|EEE90906.1| predicted protein [Populus trichocarpa]
          Length = 721

 Score =  165 bits (418), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 102/327 (31%), Positives = 164/327 (50%), Gaps = 19/327 (5%)

Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLI 402
           A   F  ++R  G   D + YTT++    +A          D+M RDGC PNVVTY  LI
Sbjct: 241 AFQLFQEMKRN-GIAPDVYVYTTLIDSFCKAGFIEQARNWFDEMERDGCAPNVVTYTALI 299

Query: 403 HSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQ----- 457
           H+Y ++  +++A +V++ M   GC P+ VTY  LID   KAG ++ A  +YK M+     
Sbjct: 300 HAYLKSRKVSKANEVYEMMLSKGCTPNIVTYTALIDGLCKAGKIEKASQIYKIMKKENVE 359

Query: 458 ------------AAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNI 505
                        A   P+ FTY  +++ L KA  ++ A  L   M  +GC PN V Y+ 
Sbjct: 360 IPDVDMHFRVVDGASNEPNVFTYGALVDGLCKAYQVKEARDLLKSMSVEGCEPNHVVYDA 419

Query: 506 MIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKN 565
           +I    KA     A +++  M   G++P+  TYS +++ L     LD A  V ++M   +
Sbjct: 420 LIDGCCKAGKLDEAQEVFTTMLECGYDPNVYTYSSLIDRLFKDKRLDLALKVLSKMLENS 479

Query: 566 WVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAY 625
             P+  +Y  ++D   K G   +A++    M + G  PNV T  +++  F + G++    
Sbjct: 480 CAPNVVIYTEMIDGLCKVGKTDEAYKLMVMMEEKGCNPNVVTYTAMIDGFGKSGRVEKCL 539

Query: 626 HLLQGMLNLGLKPSLQTYTLLLS-CCT 651
            LLQ M + G  P+  TY +L++ CC+
Sbjct: 540 ELLQQMSSKGCAPNFVTYRVLINHCCS 566



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 92/320 (28%), Positives = 154/320 (48%), Gaps = 19/320 (5%)

Query: 347 FNWLRRQ--AGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHS 404
           +N +R     GF  D  TY+ ++G L  A +     +L  +M R+G  P+V  Y  LI S
Sbjct: 207 YNVIREMMSKGFIPDTSTYSKVIGYLCNASKVEKAFQLFQEMKRNGIAPDVYVYTTLIDS 266

Query: 405 YGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPD 464
           + +A ++ +A + F +M+  GC P+ VTY  LI  + K+  +  A ++Y+ M + G +P+
Sbjct: 267 FCKAGFIEQARNWFDEMERDGCAPNVVTYTALIHAYLKSRKVSKANEVYEMMLSKGCTPN 326

Query: 465 TFTYSVIINCLGKAGHLQAAHQLFCEMVNQGC-----------------IPNLVTYNIMI 507
             TY+ +I+ L KAG ++ A Q++  M  +                    PN+ TY  ++
Sbjct: 327 IVTYTALIDGLCKAGKIEKASQIYKIMKKENVEIPDVDMHFRVVDGASNEPNVFTYGALV 386

Query: 508 ALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWV 567
               KA   + A  L + M   G EP+ V Y  +++     G LDEA+ VF  M    + 
Sbjct: 387 DGLCKAYQVKEARDLLKSMSVEGCEPNHVVYDALIDGCCKAGKLDEAQEVFTTMLECGYD 446

Query: 568 PDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHL 627
           P+   Y  L+D   K   +  A +    ML+    PNV     ++    +VG+  +AY L
Sbjct: 447 PNVYTYSSLIDRLFKDKRLDLALKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKL 506

Query: 628 LQGMLNLGLKPSLQTYTLLL 647
           +  M   G  P++ TYT ++
Sbjct: 507 MVMMEEKGCNPNVVTYTAMI 526



 Score =  137 bits (344), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 94/342 (27%), Positives = 160/342 (46%), Gaps = 57/342 (16%)

Query: 363 YTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLI------------------HS 404
           + ++V    R+  +    KLL +MV+ GCQP  V YN LI                   +
Sbjct: 115 FNSLVHAYCRSGDYAYAYKLLKKMVQCGCQPGYVVYNILIGGICSSEEPGKDVLDLAEKA 174

Query: 405 YGR-------------ANY---------LNEALDVFKQMQVVGCEPDRVTYCTLIDIHAK 442
           YG              +N+           +A +V ++M   G  PD  TY  +I     
Sbjct: 175 YGEMLEAGVVLNKVNISNFSRCLCGIGKFEKAYNVIREMMSKGFIPDTSTYSKVIGYLCN 234

Query: 443 AGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVT 502
           A  ++ A  ++++M+  G++PD + Y+ +I+   KAG ++ A   F EM   GC PN+VT
Sbjct: 235 ASKVEKAFQLFQEMKRNGIAPDVYVYTTLIDSFCKAGFIEQARNWFDEMERDGCAPNVVT 294

Query: 503 YNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMR 562
           Y  +I    K+R    A ++Y  M + G  P+ VTY+ +++ L   G +++A  ++  M+
Sbjct: 295 YTALIHAYLKSRKVSKANEVYEMMLSKGCTPNIVTYTALIDGLCKAGKIEKASQIYKIMK 354

Query: 563 RKNW-VPD-------------EP---VYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNV 605
           ++N  +PD             EP    YG LVD   KA  V++A +  ++M   G  PN 
Sbjct: 355 KENVEIPDVDMHFRVVDGASNEPNVFTYGALVDGLCKAYQVKEARDLLKSMSVEGCEPNH 414

Query: 606 PTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
              ++L+    + G+L +A  +   ML  G  P++ TY+ L+
Sbjct: 415 VVYDALIDGCCKAGKLDEAQEVFTTMLECGYDPNVYTYSSLI 456



 Score =  134 bits (338), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 112/423 (26%), Positives = 181/423 (42%), Gaps = 34/423 (8%)

Query: 350 LRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRAN 409
           L  +  F  D   YT M+  L  A  F      L +M    C PNV+TY  L+       
Sbjct: 32  LLEKEEFVPDTVLYTKMISGLCEASLFEEAMDFLTRMRASSCLPNVLTYRILLCGCLNKE 91

Query: 410 YLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYS 469
            L     +   M   GC P    + +L+  + ++G    A  + KKM   G  P    Y+
Sbjct: 92  KLGRCKRILSMMITEGCYPSPRIFNSLVHAYCRSGDYAYAYKLLKKMVQCGCQPGYVVYN 151

Query: 470 VIINCLGKAGH-----LQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYR 524
           ++I  +  +       L  A + + EM+  G + N V  +           ++ A  + R
Sbjct: 152 ILIGGICSSEEPGKDVLDLAEKAYGEMLEAGVVLNKVNISNFSRCLCGIGKFEKAYNVIR 211

Query: 525 DMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAG 584
           +M + GF PD  TYS V+  L +   +++A  +F EM+R    PD  VY  L+D + KAG
Sbjct: 212 EMMSKGFIPDTSTYSKVIGYLCNASKVEKAFQLFQEMKRNGIAPDVYVYTTLIDSFCKAG 271

Query: 585 NVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYT 644
            + +A  W++ M + G  PNV T  +L+ A+L+  ++S A  + + ML+ G  P++ TYT
Sbjct: 272 FIEQARNWFDEMERDGCAPNVVTYTALIHAYLKSRKVSKANEVYEMMLSKGCTPNIVTYT 331

Query: 645 LLLSCCTEARSPYDMGFCHELMA-----VSGHPAHMFLLSMPSPGP---------DG--- 687
            L+    +A         +++M      +     H  ++   S  P         DG   
Sbjct: 332 ALIDGLCKAGKIEKASQIYKIMKKENVEIPDVDMHFRVVDGASNEPNVFTYGALVDGLCK 391

Query: 688 ----QNVRDHVGSFLEMMHSEDRESKRGLVDAVVDFLHKSGLKEEAGSVW----EVAAQK 739
               +  RD     L+ M  E  E    + DA++D   K+G  +EA  V+    E     
Sbjct: 392 AYQVKEARD----LLKSMSVEGCEPNHVVYDALIDGCCKAGKLDEAQEVFTTMLECGYDP 447

Query: 740 NVY 742
           NVY
Sbjct: 448 NVY 450



 Score =  132 bits (333), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 82/290 (28%), Positives = 147/290 (50%), Gaps = 17/290 (5%)

Query: 375 QFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYC 434
           +F     ++ +M+  G  P+  TY+++I     A+ + +A  +F++M+  G  PD   Y 
Sbjct: 202 KFEKAYNVIREMMSKGFIPDTSTYSKVIGYLCNASKVEKAFQLFQEMKRNGIAPDVYVYT 261

Query: 435 TLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQ 494
           TLID   KAGF++ A + + +M+  G +P+  TY+ +I+   K+  +  A++++  M+++
Sbjct: 262 TLIDSFCKAGFIEQARNWFDEMERDGCAPNVVTYTALIHAYLKSRKVSKANEVYEMMLSK 321

Query: 495 GCIPNLVTYNIMIALQAKARNYQSALKLYRDMQN-----------------AGFEPDKVT 537
           GC PN+VTY  +I    KA   + A ++Y+ M+                  A  EP+  T
Sbjct: 322 GCTPNIVTYTALIDGLCKAGKIEKASQIYKIMKKENVEIPDVDMHFRVVDGASNEPNVFT 381

Query: 538 YSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAML 597
           Y  +++ L     + EA  +   M  +   P+  VY  L+D   KAG + +A E +  ML
Sbjct: 382 YGALVDGLCKAYQVKEARDLLKSMSVEGCEPNHVVYDALIDGCCKAGKLDEAQEVFTTML 441

Query: 598 QAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
           + G  PNV T +SL+    +  +L  A  +L  ML     P++  YT ++
Sbjct: 442 ECGYDPNVYTYSSLIDRLFKDKRLDLALKVLSKMLENSCAPNVVIYTEMI 491



 Score =  131 bits (329), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 102/376 (27%), Positives = 156/376 (41%), Gaps = 73/376 (19%)

Query: 329 QANQVLKQLQDHTVALGFFNWLRRQAGFKHDE---HTYTTMVGILGRARQFGAINKLLDQ 385
           +A+Q+ K ++   V +   +   R      +E    TY  +V  L +A Q      LL  
Sbjct: 345 KASQIYKIMKKENVEIPDVDMHFRVVDGASNEPNVFTYGALVDGLCKAYQVKEARDLLKS 404

Query: 386 MVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGF 445
           M  +GC+PN V Y+ LI    +A  L+EA +VF  M   G +P+  TY +LID   K   
Sbjct: 405 MSVEGCEPNHVVYDALIDGCCKAGKLDEAQEVFTTMLECGYDPNVYTYSSLIDRLFKDKR 464

Query: 446 LDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNI 505
           LD+A+ +  KM     +P+   Y+ +I+ L K G    A++L   M  +GC PN+VTY  
Sbjct: 465 LDLALKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMVMMEEKGCNPNVVTYTA 524

Query: 506 MIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKN 565
           MI    K+   +  L+L + M + G  P+ VTY +++      G LDEA  +  EM++  
Sbjct: 525 MIDGFGKSGRVEKCLELLQQMSSKGCAPNFVTYRVLINHCCSTGLLDEAHKLLEEMKQTY 584

Query: 566 W---------------------------------VPDEPVYGLLVDLWGKAGNVR----- 587
           W                                 VP  PVY +L+D + KAG +      
Sbjct: 585 WPRHVAGYRKVIEGFNREFIASLYLSFEISENDSVPVAPVYRVLIDNFIKAGRLEIALEL 644

Query: 588 --------------------------------KAWEWYEAMLQAGLRPNVPTCNSLLSAF 615
                                           KA+E Y  M+  G  P +     L+   
Sbjct: 645 NEELSSFSPFSAANQNIHITLIENLSLAHKADKAFELYADMISRGSIPELSILVHLIKGL 704

Query: 616 LRVGQLSDAYHLLQGM 631
           LRV +  +A  LL  +
Sbjct: 705 LRVNRWEEALQLLDSI 720



 Score =  107 bits (267), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 91/397 (22%), Positives = 163/397 (41%), Gaps = 44/397 (11%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           G++ DE T       L ++   G   + L  + ++   P+ V Y ++I     A+   EA
Sbjct: 5   GYRMDEFTLGCFAHSLCKS---GKWREALSLLEKEEFVPDTVLYTKMISGLCEASLFEEA 61

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
           +D   +M+   C P+ +TY  L+        L     +   M   G  P    ++ +++ 
Sbjct: 62  MDFLTRMRASSCLPNVLTYRILLCGCLNKEKLGRCKRILSMMITEGCYPSPRIFNSLVHA 121

Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARN-----YQSALKLYRDMQNA 529
             ++G    A++L  +MV  GC P  V YNI+I     +          A K Y +M  A
Sbjct: 122 YCRSGDYAYAYKLLKKMVQCGCQPGYVVYNILIGGICSSEEPGKDVLDLAEKAYGEMLEA 181

Query: 530 GFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKA 589
           G   +KV  S     L   G  ++A  V  EM  K ++PD   Y  ++     A  V KA
Sbjct: 182 GVVLNKVNISNFSRCLCGIGKFEKAYNVIREMMSKGFIPDTSTYSKVIGYLCNASKVEKA 241

Query: 590 WEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSC 649
           ++ ++ M + G+ P+V    +L+ +F + G +  A +    M   G  P++ TYT L+  
Sbjct: 242 FQLFQEMKRNGIAPDVYVYTTLIDSFCKAGFIEQARNWFDEMERDGCAPNVVTYTALIHA 301

Query: 650 CTEARSPYDMGFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRESK 709
             ++R        +E+M   G   ++   +                              
Sbjct: 302 YLKSRKVSKANEVYEMMLSKGCTPNIVTYT------------------------------ 331

Query: 710 RGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNV-YPDA 745
                A++D L K+G  E+A  ++++  ++NV  PD 
Sbjct: 332 -----ALIDGLCKAGKIEKASQIYKIMKKENVEIPDV 363


>gi|359474464|ref|XP_003631475.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
           mitochondrial-like [Vitis vinifera]
 gi|297742067|emb|CBI33854.3| unnamed protein product [Vitis vinifera]
          Length = 767

 Score =  165 bits (418), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 96/314 (30%), Positives = 165/314 (52%), Gaps = 3/314 (0%)

Query: 335 KQLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPN 394
           K+L D  ++L  F  L   AG+K+D+  Y+ ++          + +KL+++MVR+   P+
Sbjct: 408 KRLSD--ISLDIFRDLG-AAGYKYDQTAYSILIKGFCMQGDLDSAHKLMEEMVRNNLAPD 464

Query: 395 VVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYK 454
              +  L+H + +      AL+ F  M   G  P   T   +ID H + G ++ A+++  
Sbjct: 465 PSNFESLVHGFCKMGLWVNALEFFNMMLEGGILPSIATCNVIIDAHCREGRVEEALNLMN 524

Query: 455 KMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKAR 514
           +MQ  G+ P+ FTY+ +IN L K    + A +LF  M+ +  +P++V Y+ +I   AK  
Sbjct: 525 EMQTQGIFPNLFTYNAVINRLCKERKSERALELFPLMLKRNVLPSVVVYSTLIDGFAKQS 584

Query: 515 NYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYG 574
           N Q AL LY  M   G  PD V Y+I++ +L H   + EA  +F +M      PD+  Y 
Sbjct: 585 NSQKALMLYARMLKIGVTPDMVAYTILINILCHRSRMCEAYNLFKKMTENGMTPDKISYT 644

Query: 575 LLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNL 634
            ++  + + G++RKAW  +  MLQ G  P V T  SL+  + ++ ++  A  L+  M   
Sbjct: 645 SVIAGFCRIGDMRKAWALFNEMLQRGHLPTVVTYTSLVDGYCKMNRIDIADMLIDEMKRK 704

Query: 635 GLKPSLQTYTLLLS 648
           G+ P + TY +L++
Sbjct: 705 GITPDVVTYNVLIA 718



 Score =  150 bits (378), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 94/302 (31%), Positives = 158/302 (52%), Gaps = 9/302 (2%)

Query: 362 TYTTMVGILGRARQFGAIN-------KLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           TYT M+    +   FG  +       ++L++M R+G  P VVTY+  I+   R  Y+  A
Sbjct: 251 TYTIMMNFYCKG-NFGEADIDTRQATEILEEMERNGESPTVVTYSTYIYGLCRVGYVESA 309

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
           LD  + +       +   Y  +I    K G LD A+ + ++M++ G+SPD +TYS++I+ 
Sbjct: 310 LDFVRSLISANGLVNVYCYNAIIHGLCKKGELDEALKVLEEMKSCGISPDVYTYSILIHG 369

Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPD 534
             K G ++    L  EM      P+LV+Y+ +     K R    +L ++RD+  AG++ D
Sbjct: 370 FCKQGDVEKGLYLIEEMKYSNMEPSLVSYSSLFHGLCKKRLSDISLDIFRDLGAAGYKYD 429

Query: 535 KVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYE 594
           +  YSI+++     G LD A  +  EM R N  PD   +  LV  + K G    A E++ 
Sbjct: 430 QTAYSILIKGFCMQGDLDSAHKLMEEMVRNNLAPDPSNFESLVHGFCKMGLWVNALEFFN 489

Query: 595 AMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS-CCTEA 653
            ML+ G+ P++ TCN ++ A  R G++ +A +L+  M   G+ P+L TY  +++  C E 
Sbjct: 490 MMLEGGILPSIATCNVIIDAHCREGRVEEALNLMNEMQTQGIFPNLFTYNAVINRLCKER 549

Query: 654 RS 655
           +S
Sbjct: 550 KS 551



 Score =  124 bits (310), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 84/337 (24%), Positives = 152/337 (45%), Gaps = 46/337 (13%)

Query: 361 HTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQ 420
           + Y  ++  L +  +     K+L++M   G  P+V TY+ LIH + +   + + L + ++
Sbjct: 326 YCYNAIIHGLCKKGELDEALKVLEEMKSCGISPDVYTYSILIHGFCKQGDVEKGLYLIEE 385

Query: 421 MQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGH 480
           M+    EP  V+Y +L     K    D+++D+++ + AAG   D   YS++I      G 
Sbjct: 386 MKYSNMEPSLVSYSSLFHGLCKKRLSDISLDIFRDLGAAGYKYDQTAYSILIKGFCMQGD 445

Query: 481 LQAAHQL----------------------FCE-------------MVNQGCIPNLVTYNI 505
           L +AH+L                      FC+             M+  G +P++ T N+
Sbjct: 446 LDSAHKLMEEMVRNNLAPDPSNFESLVHGFCKMGLWVNALEFFNMMLEGGILPSIATCNV 505

Query: 506 MIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKN 565
           +I    +    + AL L  +MQ  G  P+  TY+ V+  L      + A  +F  M ++N
Sbjct: 506 IIDAHCREGRVEEALNLMNEMQTQGIFPNLFTYNAVINRLCKERKSERALELFPLMLKRN 565

Query: 566 WVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAY 625
            +P   VY  L+D + K  N +KA   Y  ML+ G+ P++     L++      ++ +AY
Sbjct: 566 VLPSVVVYSTLIDGFAKQSNSQKALMLYARMLKIGVTPDMVAYTILINILCHRSRMCEAY 625

Query: 626 HLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGFC 662
           +L + M   G+ P   +YT +++           GFC
Sbjct: 626 NLFKKMTENGMTPDKISYTSVIA-----------GFC 651



 Score =  112 bits (281), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 68/234 (29%), Positives = 118/234 (50%), Gaps = 1/234 (0%)

Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLI 402
           AL   N ++ Q  F  +  TY  ++  L + R+     +L   M++    P+VV Y+ LI
Sbjct: 519 ALNLMNEMQTQGIFP-NLFTYNAVINRLCKERKSERALELFPLMLKRNVLPSVVVYSTLI 577

Query: 403 HSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLS 462
             + + +   +AL ++ +M  +G  PD V Y  LI+I      +  A +++KKM   G++
Sbjct: 578 DGFAKQSNSQKALMLYARMLKIGVTPDMVAYTILINILCHRSRMCEAYNLFKKMTENGMT 637

Query: 463 PDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKL 522
           PD  +Y+ +I    + G ++ A  LF EM+ +G +P +VTY  ++    K      A  L
Sbjct: 638 PDKISYTSVIAGFCRIGDMRKAWALFNEMLQRGHLPTVVTYTSLVDGYCKMNRIDIADML 697

Query: 523 YRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLL 576
             +M+  G  PD VTY++++      G LD+A  +  EM+    +PD   Y +L
Sbjct: 698 IDEMKRKGITPDVVTYNVLIAAHRRRGNLDKALEMLNEMKENGVLPDHMTYMML 751



 Score = 89.4 bits (220), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 84/362 (23%), Positives = 155/362 (42%), Gaps = 47/362 (12%)

Query: 297 VVESVSRILRQWKWGPLAEEALGNTNYSMDAYQANQVLKQLQDHTVALGFFNWLRRQAGF 356
           V++  SRI R+    P+  +   + N+        +V + ++        F+   ++ GF
Sbjct: 77  VMKRRSRIHRKHVLSPVVVKVFKSLNW--------EVARHIK--------FSTTMKKYGF 120

Query: 357 KHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALD 416
                 + T+V +L  A     +  LL    RD     +V Y      Y + N     LD
Sbjct: 121 SRSIDAFRTVVNVLALAGMHMEVYALL----RD-----IVCY------YNKVN-----LD 160

Query: 417 VFKQMQVVGCEPDR-----VTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
            F+   ++   P       + +  LI + A    L+ A+D++ + +  GL   T + + +
Sbjct: 161 AFELFPILLESPKDAARSVIVFDLLIKVFAANSMLENAVDVFLQAKKTGLELSTRSCNFL 220

Query: 472 INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKAR------NYQSALKLYRD 525
           + CL +A   +    LF EM + G  PN+ TY IM+    K        + + A ++  +
Sbjct: 221 LKCLAEANRREFLRSLFEEMKSTGPPPNVFTYTIMMNFYCKGNFGEADIDTRQATEILEE 280

Query: 526 MQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGN 585
           M+  G  P  VTYS  +  L   GY++ A      +   N + +   Y  ++    K G 
Sbjct: 281 MERNGESPTVVTYSTYIYGLCRVGYVESALDFVRSLISANGLVNVYCYNAIIHGLCKKGE 340

Query: 586 VRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTL 645
           + +A +  E M   G+ P+V T + L+  F + G +    +L++ M    ++PSL +Y+ 
Sbjct: 341 LDEALKVLEEMKSCGISPDVYTYSILIHGFCKQGDVEKGLYLIEEMKYSNMEPSLVSYSS 400

Query: 646 LL 647
           L 
Sbjct: 401 LF 402


>gi|296087509|emb|CBI34098.3| unnamed protein product [Vitis vinifera]
          Length = 718

 Score =  165 bits (418), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 130/480 (27%), Positives = 204/480 (42%), Gaps = 28/480 (5%)

Query: 362 TYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQM 421
           +Y  M+  L   +     NKLL++M   G +PNVV Y+ LI  Y     + EA  +   M
Sbjct: 152 SYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSTLIMGYASEGRIEEARRLLDGM 211

Query: 422 QVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHL 481
              G  PD   Y  +I   +KAG ++ A     ++Q  GL PD  T+   I    K G +
Sbjct: 212 SCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKM 271

Query: 482 QAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIV 541
             A + F EM++ G +PN   Y ++I    KA N   AL ++R +   G  PD  T S  
Sbjct: 272 TEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRHLHALGVLPDVQTCSAF 331

Query: 542 MEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGL 601
           +  L   G + EA  VF+E++ K  VPD   Y  L+  + K G V KA+E ++ M   G+
Sbjct: 332 IHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGI 391

Query: 602 RPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTY-TLLLSCCTEARSPYDMG 660
            PN+   N+L+    + G +  A  L  GM   GL+P   TY T++   C          
Sbjct: 392 APNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFS 451

Query: 661 FCHELMAVSGHPAHMFLLSMPSPGPDGQ-NVRDHVGSFLEMMHSEDRESKRGLVDAVVDF 719
             HE M   G   H F+ +    G   + ++   +  F EM+      +     + ++D 
Sbjct: 452 LFHE-MPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGFATTLS--FNTLIDG 508

Query: 720 LHKSGLKEEAGSVWEVAAQKNVYPDAVKEKGMSYWLINLHVMSDGTAV--------IALS 771
             KS   +EA  +++    K + PD V    +  W      M +   +        + + 
Sbjct: 509 YCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVD 568

Query: 772 RTLAWFRKQMLISGVGPSRI-------------DIVTGWGRRSRVTGTS-LVRQAVQELL 817
              A F K M+  GV P  +             ++V  +  R  V G   L +  + +LL
Sbjct: 569 TVFALFEK-MVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGMLTKGTIHDLL 627



 Score =  143 bits (360), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 101/407 (24%), Positives = 182/407 (44%), Gaps = 24/407 (5%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           ++ G K D +  + ++    R      + ++ D MV  G   N++TYN LIH   +   +
Sbjct: 37  QKTGLKPDYNACSALIDGFMREGDIDEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKM 96

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
            +A ++ K M  +GC+P+  T+C LI+ + +   +  A+++  +M+   L P   +Y  +
Sbjct: 97  EKAAEILKGMITLGCKPNSRTFCLLIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAM 156

Query: 472 INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF 531
           IN L     L  A++L  +M   G  PN+V Y+ +I   A     + A +L   M  +G 
Sbjct: 157 INGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSTLIMGYASEGRIEEARRLLDGMSCSGV 216

Query: 532 EPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWE 591
            PD   Y+ ++  L   G ++EA     E++ +   PD   +G  +  + K G + +A +
Sbjct: 217 APDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAK 276

Query: 592 WYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCT 651
           +++ ML  GL PN P    L++   + G L +A  + + +  LG+ P +QT      C  
Sbjct: 277 YFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRHLHALGVLPDVQT------CSA 330

Query: 652 EARSPYDMGFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSE------D 705
                   G   E + V        L+      PD       +  F +    E      D
Sbjct: 331 FIHGLLKNGRVQEALKVFSELKEKGLV------PDVFTYSSLISGFCKQGEVEKAFELHD 384

Query: 706 RESKRGLV------DAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAV 746
               +G+       +A+VD L KSG  + A  +++   +K + PD+V
Sbjct: 385 EMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSV 431



 Score =  143 bits (360), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 107/392 (27%), Positives = 185/392 (47%), Gaps = 34/392 (8%)

Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLI 402
           AL  F+ L+ + G   D  TY++++    +  +     +L D+M   G  PN+  YN L+
Sbjct: 344 ALKVFSELKEK-GLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALV 402

Query: 403 HSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLS 462
               ++  +  A  +F  M   G EPD VTY T+ID + K+  +  A  ++ +M + G+ 
Sbjct: 403 DGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQ 462

Query: 463 PDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKL 522
           P +F Y+ +++   K G ++ A  LF EM+ +G     +++N +I    K+   Q A +L
Sbjct: 463 PHSFVYNALVHGCCKEGDMEKAMNLFREMLQKG-FATTLSFNTLIDGYCKSCKIQEASQL 521

Query: 523 YRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWV--------------- 567
           +++M      PD VTY+ V++     G ++EA  +F EM+ +N +               
Sbjct: 522 FQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVFALFEKMVAKG 581

Query: 568 --PDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAY 625
             PDE  YGL++    K  N+ +A++  + ++  G+       + L++A  +   L++A 
Sbjct: 582 VKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGMLTKGTIHDLLITALCKREDLTEAS 641

Query: 626 HLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGFCHELMAVSGHPAHMFLLSMPSPGP 685
            LL  M  LGLKPSL       +C T  RS ++ G   E   V      + L+      P
Sbjct: 642 KLLDEMGELGLKPSLA------ACSTLVRSFHEAGKMDEATRVFEGVKSLGLV------P 689

Query: 686 DGQNVRDHVGSFLEMMHSEDRESKRGLVDAVV 717
           D   + D V   L   +  D E  R L+  +V
Sbjct: 690 DTTTLIDLVNGNL---NDTDSEDARNLIKQLV 718



 Score =  134 bits (338), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 86/322 (26%), Positives = 153/322 (47%)

Query: 354 AGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNE 413
           +G   D   Y  ++  L +A +    +  L ++   G +P+ VT+   I  Y +   + E
Sbjct: 214 SGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTE 273

Query: 414 ALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIIN 473
           A   F +M   G  P+   Y  LI+ H KAG L  A+ +++ + A G+ PD  T S  I+
Sbjct: 274 AAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRHLHALGVLPDVQTCSAFIH 333

Query: 474 CLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEP 533
            L K G +Q A ++F E+  +G +P++ TY+ +I+   K    + A +L+ +M   G  P
Sbjct: 334 GLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAP 393

Query: 534 DKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWY 593
           +   Y+ +++ L   G +  A  +F  M  K   PD   Y  ++D + K+ NV +A+  +
Sbjct: 394 NIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLF 453

Query: 594 EAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEA 653
             M   G++P+    N+L+    + G +  A +L + ML  G   +L   TL+   C   
Sbjct: 454 HEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGFATTLSFNTLIDGYCKSC 513

Query: 654 RSPYDMGFCHELMAVSGHPAHM 675
           +         E++A    P H+
Sbjct: 514 KIQEASQLFQEMIAKQIMPDHV 535



 Score =  120 bits (300), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 96/372 (25%), Positives = 162/372 (43%), Gaps = 24/372 (6%)

Query: 386 MVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGF 445
           M   G  PN  TY  +     RA  +NEA   F++MQ  G +PD      LID   + G 
Sbjct: 1   MGEKGLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGD 60

Query: 446 LDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNI 505
           +D  + +   M + G+  +  TY+V+I+ L K G ++ A ++   M+  GC PN  T+ +
Sbjct: 61  IDEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRTFCL 120

Query: 506 MIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKN 565
           +I    +  N   AL+L  +M+     P  V+Y  ++  L HC  L  A  +  +M    
Sbjct: 121 LIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSG 180

Query: 566 WVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAY 625
             P+  VY  L+  +   G + +A    + M  +G+ P++   N+++S   + G++ +A 
Sbjct: 181 LKPNVVVYSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEAS 240

Query: 626 HLLQGMLNLGLKPSLQTYTLLL------SCCTEARSPYDMGFCHELMAVSGHPAHMFLLS 679
             L  +   GLKP   T+   +         TEA   +D    H LM    +P +  L+ 
Sbjct: 241 TYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLM--PNNPLYTVLI- 297

Query: 680 MPSPGPDGQNVRDHVGSFLEMMHSEDRESKRGL---VDAVVDFLH---KSGLKEEAGSVW 733
                    N     G+ +E +         G+   V     F+H   K+G  +EA  V+
Sbjct: 298 ---------NGHFKAGNLMEALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVF 348

Query: 734 EVAAQKNVYPDA 745
               +K + PD 
Sbjct: 349 SELKEKGLVPDV 360



 Score =  110 bits (274), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 73/296 (24%), Positives = 139/296 (46%)

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
           + G   + +TYT +   L RA++        ++M + G +P+    + LI  + R   ++
Sbjct: 3   EKGLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGDID 62

Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
           E L +   M   G   + +TY  LI    K G ++ A ++ K M   G  P++ T+ ++I
Sbjct: 63  EVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRTFCLLI 122

Query: 473 NCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFE 532
               +  ++  A +L  EM  +  +P+ V+Y  MI      ++   A KL   M  +G +
Sbjct: 123 EGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLK 182

Query: 533 PDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEW 592
           P+ V YS ++      G ++EA  +   M      PD   Y  ++    KAG + +A  +
Sbjct: 183 PNVVVYSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTY 242

Query: 593 YEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
              +   GL+P+  T  + +  + + G++++A      ML+ GL P+   YT+L++
Sbjct: 243 LLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLIN 298


>gi|346703131|emb|CBX25230.1| hypothetical_protein [Oryza brachyantha]
          Length = 746

 Score =  165 bits (418), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 101/302 (33%), Positives = 159/302 (52%), Gaps = 1/302 (0%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           GF+ D+ TY T V  L +    G   K++D MV++G  P+V TYN +++   +   L EA
Sbjct: 285 GFEPDQITYNTFVNGLCQNGHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEA 344

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
             +  QM   GC PD  T+ TLI        L+ A+D+ +++   GLSPD +T++++IN 
Sbjct: 345 KGILNQMVERGCLPDITTFNTLIVALCSGNRLEEALDLARQVTLKGLSPDVYTFNILINA 404

Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPD 534
           L K G  Q A +LF EM + GC P+ VTYN +I           AL L ++M++AG    
Sbjct: 405 LCKVGDPQLALRLFEEMKSSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKEMESAGCPRS 464

Query: 535 KVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYE 594
            VTY+ +++ L     ++EAE VF +M  +    +   +  L+D   K   +  A +   
Sbjct: 465 TVTYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKRIDDANQLIS 524

Query: 595 AMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTY-TLLLSCCTEA 653
            M+  GL+PN  T NS+L+ + + G +  A  +LQ M   G +  + TY TL+   C   
Sbjct: 525 QMISEGLQPNNITYNSILTHYCKQGDIKKAADILQTMTANGFEVDVVTYGTLINGLCKAG 584

Query: 654 RS 655
           R+
Sbjct: 585 RT 586



 Score =  149 bits (375), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 97/352 (27%), Positives = 173/352 (49%), Gaps = 4/352 (1%)

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
           Q G   D  TY  +V  L +  Q      +L+QMV  GC P++ T+N LI +    N L 
Sbjct: 318 QEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVERGCLPDITTFNTLIVALCSGNRLE 377

Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
           EALD+ +Q+ + G  PD  T+  LI+   K G   +A+ ++++M+++G +PD  TY+ +I
Sbjct: 378 EALDLARQVTLKGLSPDVYTFNILINALCKVGDPQLALRLFEEMKSSGCTPDEVTYNTLI 437

Query: 473 NCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFE 532
           + L   G L  A  L  EM + GC  + VTYN +I    K    + A +++  M   G  
Sbjct: 438 DNLCSLGKLGKALDLLKEMESAGCPRSTVTYNTIIDGLCKKMRIEEAEEVFDQMDLQGIS 497

Query: 533 PDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEW 592
            + +T++ +++ L     +D+A  + ++M  +   P+   Y  ++  + K G+++KA + 
Sbjct: 498 RNAITFNTLIDGLCKDKRIDDANQLISQMISEGLQPNNITYNSILTHYCKQGDIKKAADI 557

Query: 593 YEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTE 652
            + M   G   +V T  +L++   + G+   A  LL+GM   G++ + + Y  ++     
Sbjct: 558 LQTMTANGFEVDVVTYGTLINGLCKAGRTQVALKLLRGMRIKGMRATPKAYNPVIQSLFR 617

Query: 653 ARSPYD-MGFCHELMAVSGHPAHMFLLSMPSPG--PDGQNVRDHVGSFLEMM 701
             +  D M    E+  V G P   F   +   G    G ++R+     LEM+
Sbjct: 618 RNNTRDAMNLFREMTEV-GEPPDAFTYKIVFRGLCRGGGSIREAFDFLLEMV 668



 Score =  149 bits (375), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 88/302 (29%), Positives = 148/302 (49%), Gaps = 1/302 (0%)

Query: 354 AGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNE 413
           +G   DE T+TT++          A  ++  +M+  GC P  VT N LI+ Y +   + +
Sbjct: 214 SGVAPDETTFTTLMQGFVEEGSIKAALRVKARMLEMGCSPTKVTVNVLINGYCKLGRVED 273

Query: 414 ALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIIN 473
           AL   +Q    G EPD++TY T ++   + G +  A+ +   M   G  PD FTY++++N
Sbjct: 274 ALGYIQQEIANGFEPDQITYNTFVNGLCQNGHVGHALKVMDVMVQEGHDPDVFTYNIVVN 333

Query: 474 CLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEP 533
           CL K G L+ A  +  +MV +GC+P++ T+N +I         + AL L R +   G  P
Sbjct: 334 CLCKNGQLEEAKGILNQMVERGCLPDITTFNTLIVALCSGNRLEEALDLARQVTLKGLSP 393

Query: 534 DKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWY 593
           D  T++I++  L   G    A  +F EM+     PDE  Y  L+D     G + KA +  
Sbjct: 394 DVYTFNILINALCKVGDPQLALRLFEEMKSSGCTPDEVTYNTLIDNLCSLGKLGKALDLL 453

Query: 594 EAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTY-TLLLSCCTE 652
           + M  AG   +  T N+++    +  ++ +A  +   M   G+  +  T+ TL+   C +
Sbjct: 454 KEMESAGCPRSTVTYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKD 513

Query: 653 AR 654
            R
Sbjct: 514 KR 515



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 86/303 (28%), Positives = 147/303 (48%), Gaps = 1/303 (0%)

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
           + G K D  T+ T++  L RA Q      +L++M   G  P+  T+  L+  +     + 
Sbjct: 178 ERGIKPDVVTFNTLMKALCRAHQVRTAVLMLEEMSSSGVAPDETTFTTLMQGFVEEGSIK 237

Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
            AL V  +M  +GC P +VT   LI+ + K G ++ A+   ++  A G  PD  TY+  +
Sbjct: 238 AALRVKARMLEMGCSPTKVTVNVLINGYCKLGRVEDALGYIQQEIANGFEPDQITYNTFV 297

Query: 473 NCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFE 532
           N L + GH+  A ++   MV +G  P++ TYNI++    K    + A  +   M   G  
Sbjct: 298 NGLCQNGHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVERGCL 357

Query: 533 PDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEW 592
           PD  T++ ++  L     L+EA  +  ++  K   PD   + +L++   K G+ + A   
Sbjct: 358 PDITTFNTLIVALCSGNRLEEALDLARQVTLKGLSPDVYTFNILINALCKVGDPQLALRL 417

Query: 593 YEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTY-TLLLSCCT 651
           +E M  +G  P+  T N+L+     +G+L  A  LL+ M + G   S  TY T++   C 
Sbjct: 418 FEEMKSSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKEMESAGCPRSTVTYNTIIDGLCK 477

Query: 652 EAR 654
           + R
Sbjct: 478 KMR 480



 Score =  127 bits (319), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 87/327 (26%), Positives = 152/327 (46%), Gaps = 2/327 (0%)

Query: 347 FNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYG 406
            N L    G + D   Y  ++ +L    +   +  +  +M   G +P+VVT+N L+ +  
Sbjct: 137 LNQLDPLFGIQADTVVYNHLLNVLVEGSKMKLLETVYSEMGERGIKPDVVTFNTLMKALC 196

Query: 407 RANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTF 466
           RA+ +  A+ + ++M   G  PD  T+ TL+    + G +  A+ +  +M   G SP   
Sbjct: 197 RAHQVRTAVLMLEEMSSSGVAPDETTFTTLMQGFVEEGSIKAALRVKARMLEMGCSPTKV 256

Query: 467 TYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDM 526
           T +V+IN   K G ++ A     + +  G  P+ +TYN  +    +  +   ALK+   M
Sbjct: 257 TVNVLINGYCKLGRVEDALGYIQQEIANGFEPDQITYNTFVNGLCQNGHVGHALKVMDVM 316

Query: 527 QNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNV 586
              G +PD  TY+IV+  L   G L+EA+ +  +M  +  +PD   +  L+        +
Sbjct: 317 VQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVERGCLPDITTFNTLIVALCSGNRL 376

Query: 587 RKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTY-TL 645
            +A +    +   GL P+V T N L++A  +VG    A  L + M + G  P   TY TL
Sbjct: 377 EEALDLARQVTLKGLSPDVYTFNILINALCKVGDPQLALRLFEEMKSSGCTPDEVTYNTL 436

Query: 646 LLSCCTEARSPYDMGFCHELMAVSGHP 672
           + + C+  +    +    E M  +G P
Sbjct: 437 IDNLCSLGKLGKALDLLKE-MESAGCP 462



 Score =  115 bits (288), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 94/330 (28%), Positives = 146/330 (44%), Gaps = 15/330 (4%)

Query: 294 TGNVVESVSRILRQWKWGPLAEEALGNTNYSMDAYQANQVLKQL---QDHTVALGFFNWL 350
           +GN +E    + RQ     L          S D Y  N ++  L    D  +AL  F  +
Sbjct: 372 SGNRLEEALDLARQVTLKGL----------SPDVYTFNILINALCKVGDPQLALRLFEEM 421

Query: 351 RRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANY 410
           +  +G   DE TY T++  L    + G    LL +M   GC  + VTYN +I    +   
Sbjct: 422 K-SSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKEMESAGCPRSTVTYNTIIDGLCKKMR 480

Query: 411 LNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSV 470
           + EA +VF QM + G   + +T+ TLID   K   +D A  +  +M + GL P+  TY+ 
Sbjct: 481 IEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKRIDDANQLISQMISEGLQPNNITYNS 540

Query: 471 IINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAG 530
           I+    K G ++ A  +   M   G   ++VTY  +I    KA   Q ALKL R M+  G
Sbjct: 541 ILTHYCKQGDIKKAADILQTMTANGFEVDVVTYGTLINGLCKAGRTQVALKLLRGMRIKG 600

Query: 531 FEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLV-DLWGKAGNVRKA 589
                  Y+ V++ L       +A  +F EM      PD   Y ++   L    G++R+A
Sbjct: 601 MRATPKAYNPVIQSLFRRNNTRDAMNLFREMTEVGEPPDAFTYKIVFRGLCRGGGSIREA 660

Query: 590 WEWYEAMLQAGLRPNVPTCNSLLSAFLRVG 619
           +++   M+  G  P   +   L    L +G
Sbjct: 661 FDFLLEMVDKGFIPEFSSFRMLAEGLLNLG 690



 Score =  113 bits (282), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 119/526 (22%), Positives = 216/526 (41%), Gaps = 61/526 (11%)

Query: 334 LKQLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLL-DQMVRDGCQ 392
           L++  D   AL   N    +  F      Y  ++  LG A     + K+L  +M R+G Q
Sbjct: 51  LREQPDPDAALRMLNAALAREDFAPGPEVYEEIIRKLGAAAGAADLMKVLVTEMRREGHQ 110

Query: 393 PNVVTYNRLIHSYGRANYLNEALD------------------------------------ 416
             V   +  + SY R     +A+D                                    
Sbjct: 111 VRVGVVHSFLESYARQQLFVDAVDLVLNQLDPLFGIQADTVVYNHLLNVLVEGSKMKLLE 170

Query: 417 -VFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCL 475
            V+ +M   G +PD VT+ TL+    +A  +  A+ M ++M ++G++PD  T++ ++   
Sbjct: 171 TVYSEMGERGIKPDVVTFNTLMKALCRAHQVRTAVLMLEEMSSSGVAPDETTFTTLMQGF 230

Query: 476 GKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDK 535
            + G ++AA ++   M+  GC P  VT N++I    K    + AL   +     GFEPD+
Sbjct: 231 VEEGSIKAALRVKARMLEMGCSPTKVTVNVLINGYCKLGRVEDALGYIQQEIANGFEPDQ 290

Query: 536 VTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEA 595
           +TY+  +  L   G++  A  V   M ++   PD   Y ++V+   K G + +A      
Sbjct: 291 ITYNTFVNGLCQNGHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQ 350

Query: 596 MLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARS 655
           M++ G  P++ T N+L+ A     +L +A  L + +   GL P + T+ +L++   +   
Sbjct: 351 MVERGCLPDITTFNTLIVALCSGNRLEEALDLARQVTLKGLSPDVYTFNILINALCKVGD 410

Query: 656 PYDMGFCHELMAVSGHPA-----HMFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRESKR 710
           P       E M  SG        +  + ++ S G  G+ +       L+ M S       
Sbjct: 411 PQLALRLFEEMKSSGCTPDEVTYNTLIDNLCSLGKLGKAL-----DLLKEMESAGCPRST 465

Query: 711 GLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAVKEKGMSYWLINLHVMSDGTAVIAL 770
              + ++D L K    EEA  V+          D +  +G+S   I  + + DG      
Sbjct: 466 VTYNTIIDGLCKKMRIEEAEEVF----------DQMDLQGISRNAITFNTLIDGLCKDKR 515

Query: 771 SRTLAWFRKQMLISGVGPSRI---DIVTGWGRRSRVTGTSLVRQAV 813
                    QM+  G+ P+ I    I+T + ++  +   + + Q +
Sbjct: 516 IDDANQLISQMISEGLQPNNITYNSILTHYCKQGDIKKAADILQTM 561


>gi|238478688|ref|NP_174320.2| PPR repeat domain-containing protein [Arabidopsis thaliana]
 gi|332193082|gb|AEE31203.1| PPR repeat domain-containing protein [Arabidopsis thaliana]
          Length = 806

 Score =  165 bits (418), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 118/396 (29%), Positives = 191/396 (48%), Gaps = 18/396 (4%)

Query: 286 PFSRHFASTGNVVESVSR--ILRQW--------KWGPLAEEALGNTNYSMDAYQANQVLK 335
           P SR  A   +V E  SR  ++R+          W P  E  + N   S+   Q   VL+
Sbjct: 123 PQSREEAGRFDVEEDESRHPLVREVGRLIGLRSSWNPKHEGQMRNLLRSLKPSQVCAVLR 182

Query: 336 QLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNV 395
              D  VAL FF W  RQ  ++HD   Y +M+ +L + +      ++L  M R G     
Sbjct: 183 SQDDERVALKFFYWADRQWRYRHDPMVYYSMLEVLSKTKLCQGSRRVLVLMKRRGIYRTP 242

Query: 396 VTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKK 455
             ++R++ SY RA  L +AL V   MQ  G EP+ +   T ID+  +A  L+ A+   ++
Sbjct: 243 EAFSRVMVSYSRAGQLRDALKVLTLMQRAGVEPNLLICNTTIDVFVRANRLEKALRFLER 302

Query: 456 MQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARN 515
           MQ  G+ P+  TY+ +I        ++ A +L  +M ++GC+P+ V+Y  ++    K + 
Sbjct: 303 MQVVGIVPNVVTYNCMIRGYCDLHRVEEAIELLEDMHSKGCLPDKVSYYTIMGYLCKEKR 362

Query: 516 YQSALKLYRDM-QNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYG 574
                 L + M +  G  PD+VTY+ ++ +L    + DEA     + + K +  D+  Y 
Sbjct: 363 IVEVRDLMKKMAKEHGLVPDQVTYNTLIHMLTKHDHADEALWFLKDAQEKGFRIDKLGYS 422

Query: 575 LLVDLWGKAGNVRKAWEWYEAMLQAG-LRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLN 633
            +V    K G + +A +    ML  G   P+V T  ++++ F R+G++  A  LLQ M  
Sbjct: 423 AIVHALCKEGRMSEAKDLINEMLSKGHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQVMHT 482

Query: 634 LGLKPSLQTYTLLLS--CCT----EARSPYDMGFCH 663
            G KP+  +YT LL+  C T    EAR   +M   H
Sbjct: 483 HGHKPNTVSYTALLNGMCRTGKSLEAREMMNMSEEH 518



 Score =  117 bits (292), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 81/311 (26%), Positives = 149/311 (47%), Gaps = 3/311 (0%)

Query: 326 DAYQANQVLKQLQDHTVALGFFNWLR--RQAGFKHDEHTYTTMVGILGRARQFGAINKLL 383
           D    N ++  L  H  A     +L+  ++ GF+ D+  Y+ +V  L +  +      L+
Sbjct: 382 DQVTYNTLIHMLTKHDHADEALWFLKDAQEKGFRIDKLGYSAIVHALCKEGRMSEAKDLI 441

Query: 384 DQMVRDG-CQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAK 442
           ++M+  G C P+VVTY  +++ + R   +++A  + + M   G +P+ V+Y  L++   +
Sbjct: 442 NEMLSKGHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQVMHTHGHKPNTVSYTALLNGMCR 501

Query: 443 AGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVT 502
            G    A +M    +    SP++ TYSVI++ L + G L  A  +  EMV +G  P  V 
Sbjct: 502 TGKSLEAREMMNMSEEHWWSPNSITYSVIMHGLRREGKLSEACDVVREMVLKGFFPGPVE 561

Query: 503 YNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMR 562
            N+++    +      A K   +  N G   + V ++ V+        LD A +V  +M 
Sbjct: 562 INLLLQSLCRDGRTHEARKFMEECLNKGCAINVVNFTTVIHGFCQNDELDAALSVLDDMY 621

Query: 563 RKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLS 622
             N   D   Y  LVD  GK G + +A E  + ML  G+ P   T  +++  + ++G++ 
Sbjct: 622 LINKHADVFTYTTLVDTLGKKGRIAEATELMKKMLHKGIDPTPVTYRTVIHRYCQMGKVD 681

Query: 623 DAYHLLQGMLN 633
           D   +L+ M++
Sbjct: 682 DLVAILEKMIS 692



 Score =  114 bits (286), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 78/291 (26%), Positives = 136/291 (46%), Gaps = 2/291 (0%)

Query: 359 DEHTYTTMVGILGRARQFGAINKLLDQMVRD-GCQPNVVTYNRLIHSYGRANYLNEALDV 417
           D+ +Y T++G L + ++   +  L+ +M ++ G  P+ VTYN LIH   + ++ +EAL  
Sbjct: 346 DKVSYYTIMGYLCKEKRIVEVRDLMKKMAKEHGLVPDQVTYNTLIHMLTKHDHADEALWF 405

Query: 418 FKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAG-LSPDTFTYSVIINCLG 476
            K  Q  G   D++ Y  ++    K G +  A D+  +M + G   PD  TY+ ++N   
Sbjct: 406 LKDAQEKGFRIDKLGYSAIVHALCKEGRMSEAKDLINEMLSKGHCPPDVVTYTAVVNGFC 465

Query: 477 KAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKV 536
           + G +  A +L   M   G  PN V+Y  ++    +      A ++    +   + P+ +
Sbjct: 466 RLGEVDKAKKLLQVMHTHGHKPNTVSYTALLNGMCRTGKSLEAREMMNMSEEHWWSPNSI 525

Query: 537 TYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAM 596
           TYS++M  L   G L EA  V  EM  K + P      LL+    + G   +A ++ E  
Sbjct: 526 TYSVIMHGLRREGKLSEACDVVREMVLKGFFPGPVEINLLLQSLCRDGRTHEARKFMEEC 585

Query: 597 LQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
           L  G   NV    +++  F +  +L  A  +L  M  +     + TYT L+
Sbjct: 586 LNKGCAINVVNFTTVIHGFCQNDELDAALSVLDDMYLINKHADVFTYTTLV 636



 Score = 75.5 bits (184), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 62/255 (24%), Positives = 108/255 (42%), Gaps = 37/255 (14%)

Query: 381 KLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIH 440
           K +++ +  GC  NVV +  +IH + + + L+ AL V   M ++    D  TY TL+D  
Sbjct: 580 KFMEECLNKGCAINVVNFTTVIHGFCQNDELDAALSVLDDMYLINKHADVFTYTTLVDTL 639

Query: 441 AKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNL 500
            K G +  A ++ KKM   G+ P   TY  +I+              +C+M   G + +L
Sbjct: 640 GKKGRIAEATELMKKMLHKGIDPTPVTYRTVIH-------------RYCQM---GKVDDL 683

Query: 501 VTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAE 560
           V      A+  K  + Q                 +  Y+ V+E L   G L+EA+ +  +
Sbjct: 684 V------AILEKMISRQKC---------------RTIYNQVIEKLCVLGKLEEADTLLGK 722

Query: 561 MRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQ 620
           + R     D      L++ + K G    A++    M    L P+V  C  L    +  G+
Sbjct: 723 VLRTASRSDAKTCYALMEGYLKKGVPLSAYKVACRMFNRNLIPDVKMCEKLSKRLVLKGK 782

Query: 621 LSDAYHLLQGMLNLG 635
           + +A  L+  ++  G
Sbjct: 783 VDEADKLMLRLVERG 797


>gi|293330959|ref|NP_001169662.1| uncharacterized protein LOC100383543 [Zea mays]
 gi|224030695|gb|ACN34423.1| unknown [Zea mays]
 gi|414870691|tpg|DAA49248.1| TPA: hypothetical protein ZEAMMB73_502001 [Zea mays]
          Length = 756

 Score =  165 bits (418), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 100/302 (33%), Positives = 159/302 (52%), Gaps = 1/302 (0%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           GF+ D+ TY T V  L +        K++D M+++G  P+V TYN +I+   +   L+EA
Sbjct: 295 GFEPDQVTYNTFVHCLCQNGHVSHALKVMDLMLQEGHDPDVFTYNTVINCLSKNGELDEA 354

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
             +  QM   GC PD  T+ TLI        L+ A+D+ +++   GLSPD +T++++IN 
Sbjct: 355 KGIVNQMVDRGCLPDTTTFNTLIVALCSQNRLEEALDLARELTVKGLSPDVYTFNILINA 414

Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPD 534
           L K G      +LF EM + GC P+ VTYNI+I          +AL L ++M++ G    
Sbjct: 415 LCKVGDPHLGIRLFEEMKSSGCAPDEVTYNILIDHLCSMGKLVNALDLLKEMESNGCPRS 474

Query: 535 KVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYE 594
            VTY+ +++ L     ++EAE VF +M           +  L+D   KA  +  A E  E
Sbjct: 475 TVTYNTIIDALCKQMRIEEAEEVFDQMDAHGISRSAVTFNTLIDGLCKAKRIDDATELIE 534

Query: 595 AMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTY-TLLLSCCTEA 653
            M++ GL+P+  T NS+L+ + + G L  A  +L+ M   G +  + TY TL+   C   
Sbjct: 535 QMVKEGLQPSNITYNSILTHYCKQGDLKKAADILETMTANGFEIDVVTYGTLINGLCKAG 594

Query: 654 RS 655
           R+
Sbjct: 595 RT 596



 Score =  149 bits (375), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 95/338 (28%), Positives = 168/338 (49%), Gaps = 10/338 (2%)

Query: 315 EEALGNTNYSM-DAYQANQVLKQLQDHTV--------ALGFFNWLRRQAGFKHDEHTYTT 365
           E+ALG     + D ++ +QV      H +        AL   + L  Q G   D  TY T
Sbjct: 282 EDALGYIQKEIADGFEPDQVTYNTFVHCLCQNGHVSHALKVMD-LMLQEGHDPDVFTYNT 340

Query: 366 MVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVG 425
           ++  L +  +      +++QMV  GC P+  T+N LI +    N L EALD+ +++ V G
Sbjct: 341 VINCLSKNGELDEAKGIVNQMVDRGCLPDTTTFNTLIVALCSQNRLEEALDLARELTVKG 400

Query: 426 CEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAH 485
             PD  T+  LI+   K G   + + ++++M+++G +PD  TY+++I+ L   G L  A 
Sbjct: 401 LSPDVYTFNILINALCKVGDPHLGIRLFEEMKSSGCAPDEVTYNILIDHLCSMGKLVNAL 460

Query: 486 QLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVL 545
            L  EM + GC  + VTYN +I    K    + A +++  M   G     VT++ +++ L
Sbjct: 461 DLLKEMESNGCPRSTVTYNTIIDALCKQMRIEEAEEVFDQMDAHGISRSAVTFNTLIDGL 520

Query: 546 GHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNV 605
                +D+A  +  +M ++   P    Y  ++  + K G+++KA +  E M   G   +V
Sbjct: 521 CKAKRIDDATELIEQMVKEGLQPSNITYNSILTHYCKQGDLKKAADILETMTANGFEIDV 580

Query: 606 PTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTY 643
            T  +L++   + G+   A  LL+GM   G++P+ + Y
Sbjct: 581 VTYGTLINGLCKAGRTQVALKLLRGMRIKGIRPTPKAY 618



 Score =  145 bits (366), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 90/325 (27%), Positives = 147/325 (45%), Gaps = 35/325 (10%)

Query: 359 DEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVF 418
           DE T+TT++          A  ++  +M+  GC P  VT N LI+ Y +   + +AL   
Sbjct: 229 DETTFTTLMQGFIEEGSIEAALRVKTKMMETGCSPTRVTVNVLINGYCKMGRVEDALGYI 288

Query: 419 KQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKA 478
           ++    G EPD+VTY T +    + G +  A+ +   M   G  PD FTY+ +INCL K 
Sbjct: 289 QKEIADGFEPDQVTYNTFVHCLCQNGHVSHALKVMDLMLQEGHDPDVFTYNTVINCLSKN 348

Query: 479 GHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTY 538
           G L  A  +  +MV++GC+P+  T+N +I         + AL L R++   G  PD  T+
Sbjct: 349 GELDEAKGIVNQMVDRGCLPDTTTFNTLIVALCSQNRLEEALDLARELTVKGLSPDVYTF 408

Query: 539 SIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGN------------- 585
           +I++  L   G       +F EM+     PDE  Y +L+D     G              
Sbjct: 409 NILINALCKVGDPHLGIRLFEEMKSSGCAPDEVTYNILIDHLCSMGKLVNALDLLKEMES 468

Query: 586 ----------------------VRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSD 623
                                 + +A E ++ M   G+  +  T N+L+    +  ++ D
Sbjct: 469 NGCPRSTVTYNTIIDALCKQMRIEEAEEVFDQMDAHGISRSAVTFNTLIDGLCKAKRIDD 528

Query: 624 AYHLLQGMLNLGLKPSLQTYTLLLS 648
           A  L++ M+  GL+PS  TY  +L+
Sbjct: 529 ATELIEQMVKEGLQPSNITYNSILT 553



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 81/293 (27%), Positives = 138/293 (47%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           G + D   Y  ++ +L    +   +  + ++M   G QP+VVT N LI +  RA+ +  A
Sbjct: 155 GVQADTAVYNHLLNVLAEGSRMKLLESVYNEMTDRGIQPDVVTLNTLIKALCRAHQVRTA 214

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
           + + ++M      PD  T+ TL+    + G ++ A+ +  KM   G SP   T +V+IN 
Sbjct: 215 VLMLEEMSSHAVAPDETTFTTLMQGFIEEGSIEAALRVKTKMMETGCSPTRVTVNVLING 274

Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPD 534
             K G ++ A     + +  G  P+ VTYN  +    +  +   ALK+   M   G +PD
Sbjct: 275 YCKMGRVEDALGYIQKEIADGFEPDQVTYNTFVHCLCQNGHVSHALKVMDLMLQEGHDPD 334

Query: 535 KVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYE 594
             TY+ V+  L   G LDEA+ +  +M  +  +PD   +  L+        + +A +   
Sbjct: 335 VFTYNTVINCLSKNGELDEAKGIVNQMVDRGCLPDTTTFNTLIVALCSQNRLEEALDLAR 394

Query: 595 AMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
            +   GL P+V T N L++A  +VG       L + M + G  P   TY +L+
Sbjct: 395 ELTVKGLSPDVYTFNILINALCKVGDPHLGIRLFEEMKSSGCAPDEVTYNILI 447



 Score =  123 bits (308), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 113/458 (24%), Positives = 201/458 (43%), Gaps = 32/458 (6%)

Query: 345 GFFNWLRRQAGFKHDEHTYTTMVGILGRARQFG-AINKLLDQMVRDGCQPNVVTYNRLIH 403
           G    +RR+ G +       + V    R R+F  A++ + +Q+   G Q +   YN L++
Sbjct: 110 GLVREMRRE-GHEAGAGVVRSFVESYARLRRFDDAVDLVRNQLNTFGVQADTAVYNHLLN 168

Query: 404 SYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSP 463
                + +     V+ +M   G +PD VT  TLI    +A  +  A+ M ++M +  ++P
Sbjct: 169 VLAEGSRMKLLESVYNEMTDRGIQPDVVTLNTLIKALCRAHQVRTAVLMLEEMSSHAVAP 228

Query: 464 DTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLY 523
           D  T++ ++    + G ++AA ++  +M+  GC P  VT N++I    K    + AL   
Sbjct: 229 DETTFTTLMQGFIEEGSIEAALRVKTKMMETGCSPTRVTVNVLINGYCKMGRVEDALGYI 288

Query: 524 RDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKA 583
           +     GFEPD+VTY+  +  L   G++  A  V   M ++   PD   Y  +++   K 
Sbjct: 289 QKEIADGFEPDQVTYNTFVHCLCQNGHVSHALKVMDLMLQEGHDPDVFTYNTVINCLSKN 348

Query: 584 GNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTY 643
           G + +A      M+  G  P+  T N+L+ A     +L +A  L + +   GL P + T+
Sbjct: 349 GELDEAKGIVNQMVDRGCLPDTTTFNTLIVALCSQNRLEEALDLARELTVKGLSPDVYTF 408

Query: 644 TLLLSCCTEARSPYDMGFCHELMAVSGHPAHMFLLSMPSPGPDGQNVR-DHVGSFLEMMH 702
            +L++   +   P+      E M  SG           +P     N+  DH+ S  ++++
Sbjct: 409 NILINALCKVGDPHLGIRLFEEMKSSG----------CAPDEVTYNILIDHLCSMGKLVN 458

Query: 703 SED----RESK---RGLV--DAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAVKEKGMSY 753
           + D     ES    R  V  + ++D L K    EEA  V+          D +   G+S 
Sbjct: 459 ALDLLKEMESNGCPRSTVTYNTIIDALCKQMRIEEAEEVF----------DQMDAHGISR 508

Query: 754 WLINLHVMSDGTAVIALSRTLAWFRKQMLISGVGPSRI 791
             +  + + DG              +QM+  G+ PS I
Sbjct: 509 SAVTFNTLIDGLCKAKRIDDATELIEQMVKEGLQPSNI 546



 Score =  100 bits (248), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 67/229 (29%), Positives = 111/229 (48%), Gaps = 15/229 (6%)

Query: 325 MDAYQANQVLKQLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLD 384
           M   +A +V  Q+  H              G      T+ T++  L +A++     +L++
Sbjct: 489 MRIEEAEEVFDQMDAH--------------GISRSAVTFNTLIDGLCKAKRIDDATELIE 534

Query: 385 QMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAG 444
           QMV++G QP+ +TYN ++  Y +   L +A D+ + M   G E D VTY TLI+   KAG
Sbjct: 535 QMVKEGLQPSNITYNSILTHYCKQGDLKKAADILETMTANGFEIDVVTYGTLINGLCKAG 594

Query: 445 FLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYN 504
              VA+ + + M+  G+ P    Y+ +I  L +  +L+ A  LF EM   G  P+ +TY 
Sbjct: 595 RTQVALKLLRGMRIKGIRPTPKAYNPVIQSLFRRNNLRDALSLFREMTEVGEPPDALTYK 654

Query: 505 IMI-ALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLD 552
           I+   L       + A     +M N GF P+  ++ ++ E L + G  D
Sbjct: 655 IVFRGLCRGGGPIKEAFDFLVEMVNKGFMPEFSSFRMLAEGLLNLGMDD 703


>gi|224145304|ref|XP_002336216.1| predicted protein [Populus trichocarpa]
 gi|222832672|gb|EEE71149.1| predicted protein [Populus trichocarpa]
          Length = 616

 Score =  165 bits (418), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 100/317 (31%), Positives = 166/317 (52%), Gaps = 16/317 (5%)

Query: 362 TYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQM 421
           T+ T++  L +  +FG   +L D MV  G QP+V TY  +I+   +      A  +F++M
Sbjct: 194 TFNTLINGLCKVGKFGQAVELFDDMVARGYQPDVHTYTTIINGLCKIGETVAAAGLFRKM 253

Query: 422 QVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHL 481
              GC+PD VTY T+ID   K   ++ A+D++  M+A G+SP+ FTY+ +I  L      
Sbjct: 254 GEAGCQPDVVTYSTIIDSLCKDRRVNEALDIFSYMKAKGISPNIFTYNSLIQGLCNFSRW 313

Query: 482 QAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIV 541
           + A  +  EM++   +PN+VT++++I +  K  N   A  + + M   G EP+ VTYS +
Sbjct: 314 REASAMLNEMMSLNIMPNIVTFSLLINIFCKEGNVFEARGVLKTMTEMGVEPNVVTYSSL 373

Query: 542 MEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGL 601
           M        + EA  +F  M  K   PD   Y +L++ + KA  + +A + +  M+  GL
Sbjct: 374 MNGYSLQAEVVEARKLFDVMITKGCKPDVFSYNILINGYCKAKRIGEAKQLFNEMIHQGL 433

Query: 602 RPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGF 661
            P++ + N+L+    ++G+L +A+ L + ML  G  P L TY++LL            GF
Sbjct: 434 TPDIVSYNTLIDGLCQLGRLREAHDLFKNMLTNGNLPDLCTYSILLD-----------GF 482

Query: 662 CHELMAVSGHPAHMFLL 678
           C +     G+ A  F L
Sbjct: 483 CKQ-----GYLAKAFRL 494



 Score =  155 bits (393), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 97/321 (30%), Positives = 161/321 (50%), Gaps = 2/321 (0%)

Query: 334 LKQLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQP 393
           L ++ +   A G F  +  +AG + D  TY+T++  L + R+      +   M   G  P
Sbjct: 237 LCKIGETVAAAGLFRKMG-EAGCQPDVVTYSTIIDSLCKDRRVNEALDIFSYMKAKGISP 295

Query: 394 NVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMY 453
           N+ TYN LI      +   EA  +  +M  +   P+ VT+  LI+I  K G +  A  + 
Sbjct: 296 NIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPNIVTFSLLINIFCKEGNVFEARGVL 355

Query: 454 KKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKA 513
           K M   G+ P+  TYS ++N       +  A +LF  M+ +GC P++ +YNI+I    KA
Sbjct: 356 KTMTEMGVEPNVVTYSSLMNGYSLQAEVVEARKLFDVMITKGCKPDVFSYNILINGYCKA 415

Query: 514 RNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVY 573
           +    A +L+ +M + G  PD V+Y+ +++ L   G L EA  +F  M     +PD   Y
Sbjct: 416 KRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRLREAHDLFKNMLTNGNLPDLCTY 475

Query: 574 GLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLN 633
            +L+D + K G + KA+  + AM    L+PN+   N L+ A  +   L +A  L   +  
Sbjct: 476 SILLDGFCKQGYLAKAFRLFRAMQSTYLKPNMVMYNILIDAMCKSRNLKEARKLFSELFV 535

Query: 634 LGLKPSLQTYTLLLS-CCTEA 653
            GL+P++Q YT +++  C E 
Sbjct: 536 QGLQPNVQIYTTIINGLCKEG 556



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 98/306 (32%), Positives = 163/306 (53%), Gaps = 10/306 (3%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           G++ D HTYTT++  L +  +  A   L  +M   GCQP+VVTY+ +I S  +   +NEA
Sbjct: 222 GYQPDVHTYTTIINGLCKIGETVAAAGLFRKMGEAGCQPDVVTYSTIIDSLCKDRRVNEA 281

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
           LD+F  M+  G  P+  TY +LI           A  M  +M +  + P+  T+S++IN 
Sbjct: 282 LDIFSYMKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPNIVTFSLLINI 341

Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMI---ALQAKARNYQSALKLYRDMQNAGF 531
             K G++  A  +   M   G  PN+VTY+ ++   +LQA+      A KL+  M   G 
Sbjct: 342 FCKEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEV---VEARKLFDVMITKGC 398

Query: 532 EPDKVTYSIVMEVLGHC--GYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKA 589
           +PD  +Y+I++   G+C    + EA+ +F EM  +   PD   Y  L+D   + G +R+A
Sbjct: 399 KPDVFSYNILIN--GYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRLREA 456

Query: 590 WEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSC 649
            + ++ ML  G  P++ T + LL  F + G L+ A+ L + M +  LKP++  Y +L+  
Sbjct: 457 HDLFKNMLTNGNLPDLCTYSILLDGFCKQGYLAKAFRLFRAMQSTYLKPNMVMYNILIDA 516

Query: 650 CTEARS 655
             ++R+
Sbjct: 517 MCKSRN 522



 Score =  149 bits (377), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 86/305 (28%), Positives = 165/305 (54%), Gaps = 1/305 (0%)

Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLI 402
           AL  F++++ + G   +  TY +++  L    ++   + +L++M+     PN+VT++ LI
Sbjct: 281 ALDIFSYMKAK-GISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPNIVTFSLLI 339

Query: 403 HSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLS 462
           + + +   + EA  V K M  +G EP+ VTY +L++ ++    +  A  ++  M   G  
Sbjct: 340 NIFCKEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVVEARKLFDVMITKGCK 399

Query: 463 PDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKL 522
           PD F+Y+++IN   KA  +  A QLF EM++QG  P++V+YN +I    +    + A  L
Sbjct: 400 PDVFSYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRLREAHDL 459

Query: 523 YRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGK 582
           +++M   G  PD  TYSI+++     GYL +A  +F  M+     P+  +Y +L+D   K
Sbjct: 460 FKNMLTNGNLPDLCTYSILLDGFCKQGYLAKAFRLFRAMQSTYLKPNMVMYNILIDAMCK 519

Query: 583 AGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQT 642
           + N+++A + +  +   GL+PNV    ++++   + G L +A    + M   G  P+  +
Sbjct: 520 SRNLKEARKLFSELFVQGLQPNVQIYTTIINGLCKEGLLDEALEAFRNMEEDGCPPNEFS 579

Query: 643 YTLLL 647
           Y +++
Sbjct: 580 YNVII 584



 Score =  138 bits (348), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 82/281 (29%), Positives = 144/281 (51%)

Query: 362 TYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQM 421
           T++ ++ I  +         +L  M   G +PNVVTY+ L++ Y     + EA  +F  M
Sbjct: 334 TFSLLINIFCKEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVVEARKLFDVM 393

Query: 422 QVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHL 481
              GC+PD  +Y  LI+ + KA  +  A  ++ +M   GL+PD  +Y+ +I+ L + G L
Sbjct: 394 ITKGCKPDVFSYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRL 453

Query: 482 QAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIV 541
           + AH LF  M+  G +P+L TY+I++    K      A +L+R MQ+   +P+ V Y+I+
Sbjct: 454 REAHDLFKNMLTNGNLPDLCTYSILLDGFCKQGYLAKAFRLFRAMQSTYLKPNMVMYNIL 513

Query: 542 MEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGL 601
           ++ +     L EA  +F+E+  +   P+  +Y  +++   K G + +A E +  M + G 
Sbjct: 514 IDAMCKSRNLKEARKLFSELFVQGLQPNVQIYTTIINGLCKEGLLDEALEAFRNMEEDGC 573

Query: 602 RPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQT 642
            PN  + N ++  FL+    S A  L+  M   G    + T
Sbjct: 574 PPNEFSYNVIIRGFLQHKDESRAVQLIGEMREKGFVADVAT 614



 Score =  137 bits (344), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 85/277 (30%), Positives = 145/277 (52%)

Query: 378 AINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLI 437
           A+  L  QM   G  P+  T + LI+ + +   ++    V  ++  +G +   VT+ TLI
Sbjct: 140 AVISLSKQMELAGLSPDTYTLHMLINCFFQLQRVDLGFSVLAKIIKLGLQLTIVTFNTLI 199

Query: 438 DIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCI 497
           +   K G    A++++  M A G  PD  TY+ IIN L K G   AA  LF +M   GC 
Sbjct: 200 NGLCKVGKFGQAVELFDDMVARGYQPDVHTYTTIINGLCKIGETVAAAGLFRKMGEAGCQ 259

Query: 498 PNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAV 557
           P++VTY+ +I    K R    AL ++  M+  G  P+  TY+ +++ L +     EA A+
Sbjct: 260 PDVVTYSTIIDSLCKDRRVNEALDIFSYMKAKGISPNIFTYNSLIQGLCNFSRWREASAM 319

Query: 558 FAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLR 617
             EM   N +P+   + LL++++ K GNV +A    + M + G+ PNV T +SL++ +  
Sbjct: 320 LNEMMSLNIMPNIVTFSLLINIFCKEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYSL 379

Query: 618 VGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEAR 654
             ++ +A  L   M+  G KP + +Y +L++   +A+
Sbjct: 380 QAEVVEARKLFDVMITKGCKPDVFSYNILINGYCKAK 416



 Score =  117 bits (292), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 77/284 (27%), Positives = 144/284 (50%), Gaps = 7/284 (2%)

Query: 383 LDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA-LDVFKQMQVVGCEPDRVTYCTLIDIHA 441
            + M+    +P ++ +N+L+ +  +  + ++A + + KQM++ G  PD  T   LI+   
Sbjct: 109 FNHMLHRKPRPCIIQFNKLLSAIVKMRHYHDAVISLSKQMELAGLSPDTYTLHMLINCFF 168

Query: 442 KAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLV 501
           +   +D+   +  K+   GL     T++ +IN L K G    A +LF +MV +G  P++ 
Sbjct: 169 QLQRVDLGFSVLAKIIKLGLQLTIVTFNTLINGLCKVGKFGQAVELFDDMVARGYQPDVH 228

Query: 502 TYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEM 561
           TY  +I    K     +A  L+R M  AG +PD VTYS +++ L     ++EA  +F+ M
Sbjct: 229 TYTTIINGLCKIGETVAAAGLFRKMGEAGCQPDVVTYSTIIDSLCKDRRVNEALDIFSYM 288

Query: 562 RRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQL 621
           + K   P+   Y  L+         R+A      M+   + PN+ T + L++ F + G +
Sbjct: 289 KAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPNIVTFSLLINIFCKEGNV 348

Query: 622 SDAYHLLQGMLNLGLKPSLQTYTLLLSC------CTEARSPYDM 659
            +A  +L+ M  +G++P++ TY+ L++         EAR  +D+
Sbjct: 349 FEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVVEARKLFDV 392



 Score = 98.6 bits (244), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 60/218 (27%), Positives = 102/218 (46%), Gaps = 35/218 (16%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           G K D  +Y  ++    +A++ G   +L ++M+  G  P++V+YN LI    +   L EA
Sbjct: 397 GCKPDVFSYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRLREA 456

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
            D+FK M   G  PD  TY  L+D   K G+L  A  +++ MQ+  L P+   Y+++I+ 
Sbjct: 457 HDLFKNMLTNGNLPDLCTYSILLDGFCKQGYLAKAFRLFRAMQSTYLKPNMVMYNILIDA 516

Query: 475 LGKAGHLQAAHQLFCEMVNQG-----------------------------------CIPN 499
           + K+ +L+ A +LF E+  QG                                   C PN
Sbjct: 517 MCKSRNLKEARKLFSELFVQGLQPNVQIYTTIINGLCKEGLLDEALEAFRNMEEDGCPPN 576

Query: 500 LVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVT 537
             +YN++I    + ++   A++L  +M+  GF  D  T
Sbjct: 577 EFSYNVIIRGFLQHKDESRAVQLIGEMREKGFVADVAT 614


>gi|356508736|ref|XP_003523110.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
           mitochondrial-like [Glycine max]
          Length = 680

 Score =  165 bits (418), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 89/318 (27%), Positives = 159/318 (50%)

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
           +AG K DE TY+ ++ +   A ++ +   +L +M     QPN   ++R++ +Y       
Sbjct: 339 KAGVKPDEQTYSLLIDVYAHAGRWESARIVLKEMEASNVQPNSYVFSRILANYRDKGEWQ 398

Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
           ++  V K M+  G +PDR  Y  +ID   K   LD AM  +++M + G+ PD  T++ +I
Sbjct: 399 KSFQVLKDMKSSGVQPDRHFYNVMIDTFGKYNCLDHAMATFERMLSEGIPPDIVTWNTLI 458

Query: 473 NCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFE 532
           +C  K+G    A +LF EM  +G  P + TYNIMI    + + ++        MQ+ G +
Sbjct: 459 DCHCKSGRHDMAEELFSEMQQRGYSPCITTYNIMINSMGEQQRWEQVTAFLSKMQSQGLQ 518

Query: 533 PDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEW 592
           P+ +TY+ +++V G  G   +A      ++   + P   +Y  L++ + + G    A   
Sbjct: 519 PNSITYTTLVDVYGKSGRFSDAIECLEVLKSTGFKPTSTMYNALINAYAQRGLSELAVNA 578

Query: 593 YEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTE 652
           +  M   GL P++   NSL++AF    + ++A+ +LQ M    ++P + TYT L+     
Sbjct: 579 FRLMTTEGLTPSLLALNSLINAFGEDRRDAEAFAVLQYMKENNIEPDVVTYTTLMKALIR 638

Query: 653 ARSPYDMGFCHELMAVSG 670
                 +   +E M  SG
Sbjct: 639 VEKFQKVPAVYEEMVASG 656



 Score =  139 bits (349), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 93/351 (26%), Positives = 159/351 (45%), Gaps = 36/351 (10%)

Query: 339 DHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTY 398
           D T A+ F   + +  G      T   ++  LG + +      L +++  +G +P    Y
Sbjct: 256 DPTRAMRFLA-MAQSNGLNPKPSTLVAVILALGNSGRTHEAEALFEEIRENGLEPRTRAY 314

Query: 399 NRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQA 458
           N L+  Y R   L +A  V  +M+  G +PD  TY  LID++A AG  + A  + K+M+A
Sbjct: 315 NALLKGYVRTGSLKDAEFVVSEMEKAGVKPDEQTYSLLIDVYAHAGRWESARIVLKEMEA 374

Query: 459 -----------------------------------AGLSPDTFTYSVIINCLGKAGHLQA 483
                                              +G+ PD   Y+V+I+  GK   L  
Sbjct: 375 SNVQPNSYVFSRILANYRDKGEWQKSFQVLKDMKSSGVQPDRHFYNVMIDTFGKYNCLDH 434

Query: 484 AHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVME 543
           A   F  M+++G  P++VT+N +I    K+  +  A +L+ +MQ  G+ P   TY+I++ 
Sbjct: 435 AMATFERMLSEGIPPDIVTWNTLIDCHCKSGRHDMAEELFSEMQQRGYSPCITTYNIMIN 494

Query: 544 VLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRP 603
            +G     ++  A  ++M+ +   P+   Y  LVD++GK+G    A E  E +   G +P
Sbjct: 495 SMGEQQRWEQVTAFLSKMQSQGLQPNSITYTTLVDVYGKSGRFSDAIECLEVLKSTGFKP 554

Query: 604 NVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEAR 654
                N+L++A+ + G    A +  + M   GL PSL     L++   E R
Sbjct: 555 TSTMYNALINAYAQRGLSELAVNAFRLMTTEGLTPSLLALNSLINAFGEDR 605



 Score =  129 bits (325), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 77/284 (27%), Positives = 138/284 (48%), Gaps = 3/284 (1%)

Query: 369 ILGRARQFGAINK---LLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVG 425
           IL   R  G   K   +L  M   G QP+   YN +I ++G+ N L+ A+  F++M   G
Sbjct: 387 ILANYRDKGEWQKSFQVLKDMKSSGVQPDRHFYNVMIDTFGKYNCLDHAMATFERMLSEG 446

Query: 426 CEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAH 485
             PD VT+ TLID H K+G  D+A +++ +MQ  G SP   TY+++IN +G+    +   
Sbjct: 447 IPPDIVTWNTLIDCHCKSGRHDMAEELFSEMQQRGYSPCITTYNIMINSMGEQQRWEQVT 506

Query: 486 QLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVL 545
               +M +QG  PN +TY  ++ +  K+  +  A++    +++ GF+P    Y+ ++   
Sbjct: 507 AFLSKMQSQGLQPNSITYTTLVDVYGKSGRFSDAIECLEVLKSTGFKPTSTMYNALINAY 566

Query: 546 GHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNV 605
              G  + A   F  M  +   P       L++ +G+     +A+   + M +  + P+V
Sbjct: 567 AQRGLSELAVNAFRLMTTEGLTPSLLALNSLINAFGEDRRDAEAFAVLQYMKENNIEPDV 626

Query: 606 PTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSC 649
            T  +L+ A +RV +      + + M+  G  P  +   +L S 
Sbjct: 627 VTYTTLMKALIRVEKFQKVPAVYEEMVASGCTPDRKARAMLRSA 670



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 116/463 (25%), Positives = 201/463 (43%), Gaps = 23/463 (4%)

Query: 362 TYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEAL--DVFK 419
           TY  ++G   R         L+ +M RDG QP+ V Y+ +I    R+N ++  +   ++ 
Sbjct: 171 TYNALIGACARNGDVEKALNLMSKMRRDGYQPDFVNYSSIIQYLTRSNKIDSPILQKLYA 230

Query: 420 QMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAG 479
           +++    E D      +I   +KAG    AM      Q+ GL+P   T   +I  LG +G
Sbjct: 231 EIETDKIEIDGHLMNDIIVGFSKAGDPTRAMRFLAMAQSNGLNPKPSTLVAVILALGNSG 290

Query: 480 HLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYS 539
               A  LF E+   G  P    YN ++    +  + + A  +  +M+ AG +PD+ TYS
Sbjct: 291 RTHEAEALFEEIRENGLEPRTRAYNALLKGYVRTGSLKDAEFVVSEMEKAGVKPDEQTYS 350

Query: 540 IVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQA 599
           ++++V  H G  + A  V  EM   N  P+  V+  ++  +   G  +K+++  + M  +
Sbjct: 351 LLIDVYAHAGRWESARIVLKEMEASNVQPNSYVFSRILANYRDKGEWQKSFQVLKDMKSS 410

Query: 600 GLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSC-CTEARSPYD 658
           G++P+    N ++  F +   L  A    + ML+ G+ P + T+  L+ C C   R  +D
Sbjct: 411 GVQPDRHFYNVMIDTFGKYNCLDHAMATFERMLSEGIPPDIVTWNTLIDCHCKSGR--HD 468

Query: 659 MGFCHEL---MAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRESKRGLVDA 715
           M    EL   M   G+   +   ++       Q   + V +FL  M S+  +        
Sbjct: 469 MA--EELFSEMQQRGYSPCITTYNIMINSMGEQQRWEQVTAFLSKMQSQGLQPNSITYTT 526

Query: 716 VVDFLHKSGLKEEAGSVWEVAAQKNVYPDAVKEKGMSYWLINLHVMSDGTAVIALSRTLA 775
           +VD   KSG   +A    EV       P +     M   LIN +    G + +A++    
Sbjct: 527 LVDVYGKSGRFSDAIECLEVLKSTGFKPTST----MYNALINAYAQR-GLSELAVNA--- 578

Query: 776 WFRKQMLISGVGPSRI---DIVTGWGRRSRVTGTSLVRQAVQE 815
            FR  M   G+ PS +    ++  +G   R      V Q ++E
Sbjct: 579 -FR-LMTTEGLTPSLLALNSLINAFGEDRRDAEAFAVLQYMKE 619



 Score =  120 bits (301), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 92/402 (22%), Positives = 178/402 (44%), Gaps = 10/402 (2%)

Query: 389 DGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDV 448
           +G  P   T   +I + G +   +EA  +F++++  G EP    Y  L+  + + G L  
Sbjct: 270 NGLNPKPSTLVAVILALGNSGRTHEAEALFEEIRENGLEPRTRAYNALLKGYVRTGSLKD 329

Query: 449 AMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIA 508
           A  +  +M+ AG+ PD  TYS++I+    AG  ++A  +  EM      PN   ++ ++A
Sbjct: 330 AEFVVSEMEKAGVKPDEQTYSLLIDVYAHAGRWESARIVLKEMEASNVQPNSYVFSRILA 389

Query: 509 LQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVP 568
                  +Q + ++ +DM+++G +PD+  Y+++++  G    LD A A F  M  +   P
Sbjct: 390 NYRDKGEWQKSFQVLKDMKSSGVQPDRHFYNVMIDTFGKYNCLDHAMATFERMLSEGIPP 449

Query: 569 DEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLL 628
           D   +  L+D   K+G    A E +  M Q G  P + T N ++++     +       L
Sbjct: 450 DIVTWNTLIDCHCKSGRHDMAEELFSEMQQRGYSPCITTYNIMINSMGEQQRWEQVTAFL 509

Query: 629 QGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGFCHELMAVSGHPAHMFLLSMPSPGPDGQ 688
             M + GL+P+  TYT L+    ++    D   C E++  +G      + +        +
Sbjct: 510 SKMQSQGLQPNSITYTTLVDVYGKSGRFSDAIECLEVLKSTGFKPTSTMYNALINAYAQR 569

Query: 689 NVRDHVGSFLEMMHSEDRESKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAVKE 748
            + +   +   +M +E        ++++++   +     EA +V +   + N+ PD V  
Sbjct: 570 GLSELAVNAFRLMTTEGLTPSLLALNSLINAFGEDRRDAEAFAVLQYMKENNIEPDVVTY 629

Query: 749 KGMSYWLINLHVMSDGTAVIALSRTLAWFRKQMLISGVGPSR 790
             +   LI +       AV           ++M+ SG  P R
Sbjct: 630 TTLMKALIRVEKFQKVPAVY----------EEMVASGCTPDR 661



 Score =  110 bits (274), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 89/390 (22%), Positives = 166/390 (42%), Gaps = 19/390 (4%)

Query: 218 GTSLETHNVSSDNSD-RRRIVQPRSKAHSNRLNSNFKSNLQPSDAKVVECVSERFSKPSR 276
           G S  TH   +   + R   ++PR++A+    N+  K  ++    K  E V     K   
Sbjct: 287 GNSGRTHEAEALFEEIRENGLEPRTRAY----NALLKGYVRTGSLKDAEFVVSEMEK--- 339

Query: 277 EMKIPAGLAPFSRHFASTGNVVESVSRILRQWKWGPLAEEALGNTNYSMDAYQANQVLKQ 336
                AG+ P  + ++   +V     R    W+   +  + +  +N   ++Y  +++L  
Sbjct: 340 -----AGVKPDEQTYSLLIDVYAHAGR----WESARIVLKEMEASNVQPNSYVFSRILAN 390

Query: 337 LQDHTVALGFFNWLR--RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPN 394
            +D       F  L+  + +G + D H Y  M+   G+           ++M+ +G  P+
Sbjct: 391 YRDKGEWQKSFQVLKDMKSSGVQPDRHFYNVMIDTFGKYNCLDHAMATFERMLSEGIPPD 450

Query: 395 VVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYK 454
           +VT+N LI  + ++   + A ++F +MQ  G  P   TY  +I+   +    +       
Sbjct: 451 IVTWNTLIDCHCKSGRHDMAEELFSEMQQRGYSPCITTYNIMINSMGEQQRWEQVTAFLS 510

Query: 455 KMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKAR 514
           KMQ+ GL P++ TY+ +++  GK+G    A +    + + G  P    YN +I   A+  
Sbjct: 511 KMQSQGLQPNSITYTTLVDVYGKSGRFSDAIECLEVLKSTGFKPTSTMYNALINAYAQRG 570

Query: 515 NYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYG 574
             + A+  +R M   G  P  +  + ++   G      EA AV   M+  N  PD   Y 
Sbjct: 571 LSELAVNAFRLMTTEGLTPSLLALNSLINAFGEDRRDAEAFAVLQYMKENNIEPDVVTYT 630

Query: 575 LLVDLWGKAGNVRKAWEWYEAMLQAGLRPN 604
            L+    +    +K    YE M+ +G  P+
Sbjct: 631 TLMKALIRVEKFQKVPAVYEEMVASGCTPD 660



 Score = 95.1 bits (235), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 49/208 (23%), Positives = 101/208 (48%), Gaps = 1/208 (0%)

Query: 340 HTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYN 399
           H +A   F+ ++ Q G+     TY  M+  +G  +++  +   L +M   G QPN +TY 
Sbjct: 467 HDMAEELFSEMQ-QRGYSPCITTYNIMINSMGEQQRWEQVTAFLSKMQSQGLQPNSITYT 525

Query: 400 RLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAA 459
            L+  YG++   ++A++  + ++  G +P    Y  LI+ +A+ G  ++A++ ++ M   
Sbjct: 526 TLVDVYGKSGRFSDAIECLEVLKSTGFKPTSTMYNALINAYAQRGLSELAVNAFRLMTTE 585

Query: 460 GLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSA 519
           GL+P     + +IN  G+      A  +   M      P++VTY  ++    +   +Q  
Sbjct: 586 GLTPSLLALNSLINAFGEDRRDAEAFAVLQYMKENNIEPDVVTYTTLMKALIRVEKFQKV 645

Query: 520 LKLYRDMQNAGFEPDKVTYSIVMEVLGH 547
             +Y +M  +G  PD+   +++   L +
Sbjct: 646 PAVYEEMVASGCTPDRKARAMLRSALRY 673



 Score = 75.5 bits (184), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 72/316 (22%), Positives = 126/316 (39%), Gaps = 42/316 (13%)

Query: 468 YSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQ 527
           YS++IN LG++  L  A      +++Q  +   +TYN +I   A+  + + AL L   M+
Sbjct: 142 YSILINALGRSEKLYEAF-----LLSQRQVLTPLTYNALIGACARNGDVEKALNLMSKMR 196

Query: 528 NAGFEPDKVTYSIVMEVLGHCGYLD-----------EAEAV------------------- 557
             G++PD V YS +++ L     +D           E + +                   
Sbjct: 197 RDGYQPDFVNYSSIIQYLTRSNKIDSPILQKLYAEIETDKIEIDGHLMNDIIVGFSKAGD 256

Query: 558 ------FAEMRRKNWVPDEPVYGLLVDL-WGKAGNVRKAWEWYEAMLQAGLRPNVPTCNS 610
                 F  M + N +  +P   + V L  G +G   +A   +E + + GL P     N+
Sbjct: 257 PTRAMRFLAMAQSNGLNPKPSTLVAVILALGNSGRTHEAEALFEEIRENGLEPRTRAYNA 316

Query: 611 LLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGFCHELMAVSG 670
           LL  ++R G L DA  ++  M   G+KP  QTY+LL+     A          + M  S 
Sbjct: 317 LLKGYVRTGSLKDAEFVVSEMEKAGVKPDEQTYSLLIDVYAHAGRWESARIVLKEMEASN 376

Query: 671 HPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRESKRGLVDAVVDFLHKSGLKEEAG 730
              + ++ S        +         L+ M S   +  R   + ++D   K    + A 
Sbjct: 377 VQPNSYVFSRILANYRDKGEWQKSFQVLKDMKSSGVQPDRHFYNVMIDTFGKYNCLDHAM 436

Query: 731 SVWEVAAQKNVYPDAV 746
           + +E    + + PD V
Sbjct: 437 ATFERMLSEGIPPDIV 452


>gi|334183590|ref|NP_176479.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75179661|sp|Q9LQ16.1|PPR94_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g62910
 gi|8493578|gb|AAF75801.1|AC011000_4 Contains a RepB PF|01051 protein domain and multiple PPR PF|01535
           repeats [Arabidopsis thaliana]
 gi|332195899|gb|AEE34020.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 632

 Score =  165 bits (418), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 96/297 (32%), Positives = 159/297 (53%), Gaps = 4/297 (1%)

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
           + G+K D  T+TT++  L    +      L+DQMV+ GCQP++VTY  +++   +   ++
Sbjct: 181 EMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDID 240

Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
            AL + K+M+    E D V Y T+ID   K   +D A++++ +M   G+ PD FTYS +I
Sbjct: 241 LALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLI 300

Query: 473 NCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFE 532
           +CL   G    A +L  +M+ +   PN+VT++ +I    K      A KLY +M     +
Sbjct: 301 SCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSID 360

Query: 533 PDKVTYSIVMEVLGHCGY--LDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAW 590
           PD  TYS ++   G C +  LDEA+ +F  M  K+  P+   Y  L+  + KA  V +  
Sbjct: 361 PDIFTYSSLIN--GFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGM 418

Query: 591 EWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
           E +  M Q GL  N  T  +L+  F +     +A  + + M+++G+ P++ TY +LL
Sbjct: 419 ELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILL 475



 Score =  151 bits (382), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 93/305 (30%), Positives = 157/305 (51%), Gaps = 1/305 (0%)

Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLI 402
           AL  F  +  + G + D  TY++++  L    ++   ++LL  M+     PNVVT++ LI
Sbjct: 277 ALNLFTEMDNK-GIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALI 335

Query: 403 HSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLS 462
            ++ +   L EA  ++ +M     +PD  TY +LI+       LD A  M++ M +    
Sbjct: 336 DAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCF 395

Query: 463 PDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKL 522
           P+  TYS +I    KA  ++   +LF EM  +G + N VTY  +I    +AR+  +A  +
Sbjct: 396 PNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMV 455

Query: 523 YRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGK 582
           ++ M + G  P+ +TY+I+++ L   G L +A  VF  ++R    PD   Y ++++   K
Sbjct: 456 FKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCK 515

Query: 583 AGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQT 642
           AG V   WE +  +   G+ PNV   N+++S F R G   +A  LL+ M   G  P+  T
Sbjct: 516 AGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGT 575

Query: 643 YTLLL 647
           Y  L+
Sbjct: 576 YNTLI 580



 Score =  150 bits (379), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 95/322 (29%), Positives = 166/322 (51%), Gaps = 3/322 (0%)

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
           + G++ D  T ++++     +++      L+DQMV  G +P+  T+  LIH     N  +
Sbjct: 146 KLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKAS 205

Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
           EA+ +  QM   GC+PD VTY T+++   K G +D+A+ + KKM+   +  D   Y+ II
Sbjct: 206 EAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTII 265

Query: 473 NCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFE 532
           + L K  H+  A  LF EM N+G  P++ TY+ +I+       +  A +L  DM      
Sbjct: 266 DGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKIN 325

Query: 533 PDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEW 592
           P+ VT+S +++     G L EAE ++ EM +++  PD   Y  L++ +     + +A   
Sbjct: 326 PNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHM 385

Query: 593 YEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTE 652
           +E M+     PNV T ++L+  F +  ++ +   L + M   GL  +  TYT L+    +
Sbjct: 386 FELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQ 445

Query: 653 ARSPYD--MGFCHELMAVSGHP 672
           AR   +  M F  ++++V  HP
Sbjct: 446 ARDCDNAQMVF-KQMVSVGVHP 466



 Score =  143 bits (360), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 88/315 (27%), Positives = 159/315 (50%), Gaps = 7/315 (2%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           G  HD +TY+  +    R  Q      +L +M++ G +P++VT + L++ Y  +  +++A
Sbjct: 113 GISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDA 172

Query: 415 LDVFKQMQVVGCEPDRVTYCTLID---IHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
           + +  QM  +G +PD  T+ TLI    +H KA     A+ +  +M   G  PD  TY  +
Sbjct: 173 VALVDQMVEMGYKPDTFTFTTLIHGLFLHNKAS---EAVALVDQMVQRGCQPDLVTYGTV 229

Query: 472 INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF 531
           +N L K G +  A  L  +M       ++V YN +I    K ++   AL L+ +M N G 
Sbjct: 230 VNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGI 289

Query: 532 EPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWE 591
            PD  TYS ++  L + G   +A  + ++M  +   P+   +  L+D + K G + +A +
Sbjct: 290 RPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEK 349

Query: 592 WYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTY-TLLLSCC 650
            Y+ M++  + P++ T +SL++ F    +L +A H+ + M++    P++ TY TL+   C
Sbjct: 350 LYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFC 409

Query: 651 TEARSPYDMGFCHEL 665
              R    M    E+
Sbjct: 410 KAKRVEEGMELFREM 424



 Score =  133 bits (335), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 100/365 (27%), Positives = 172/365 (47%), Gaps = 22/365 (6%)

Query: 363 YTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQ 422
           +  ++  + +  +F  +  L +QM   G   ++ TY+  I+ + R + L+ AL V  +M 
Sbjct: 86  FNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMM 145

Query: 423 VVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQ 482
            +G EPD VT  +L++ +  +  +  A+ +  +M   G  PDTFT++ +I+ L       
Sbjct: 146 KLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKAS 205

Query: 483 AAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVM 542
            A  L  +MV +GC P+LVTY  ++    K  +   AL L + M+    E D V Y+ ++
Sbjct: 206 EAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTII 265

Query: 543 EVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLR 602
           + L    ++D+A  +F EM  K   PD   Y  L+      G    A      M++  + 
Sbjct: 266 DGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKIN 325

Query: 603 PNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGFC 662
           PNV T ++L+ AF++ G+L +A  L   M+   + P + TY+ L++           GFC
Sbjct: 326 PNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLIN-----------GFC 374

Query: 663 -HELMAVSGHPAHMFLLSMPSPG-PDGQNVRDHVGSFLEMMHSED-----RE-SKRGLVD 714
            H+ +       HMF L +     P+       +  F +    E+     RE S+RGLV 
Sbjct: 375 MHDRL---DEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVG 431

Query: 715 AVVDF 719
             V +
Sbjct: 432 NTVTY 436



 Score =  131 bits (329), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 79/293 (26%), Positives = 149/293 (50%)

Query: 362 TYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQM 421
           T++ ++    +  +     KL D+M++    P++ TY+ LI+ +   + L+EA  +F+ M
Sbjct: 330 TFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELM 389

Query: 422 QVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHL 481
               C P+ VTY TLI    KA  ++  M+++++M   GL  +T TY+ +I+   +A   
Sbjct: 390 ISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDC 449

Query: 482 QAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIV 541
             A  +F +MV+ G  PN++TYNI++    K      A+ ++  +Q +  EPD  TY+I+
Sbjct: 450 DNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIM 509

Query: 542 MEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGL 601
           +E +   G +++   +F  +  K   P+   Y  ++  + + G+  +A    + M + G 
Sbjct: 510 IEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGP 569

Query: 602 RPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEAR 654
            PN  T N+L+ A LR G    +  L++ M + G      T  L+ +   + R
Sbjct: 570 LPNSGTYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTNMLHDGR 622



 Score =  111 bits (277), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 68/267 (25%), Positives = 131/267 (49%), Gaps = 1/267 (0%)

Query: 359 DEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVF 418
           D  TY++++       +      + + M+   C PNVVTY+ LI  + +A  + E +++F
Sbjct: 362 DIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELF 421

Query: 419 KQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKA 478
           ++M   G   + VTY TLI    +A   D A  ++K+M + G+ P+  TY+++++ L K 
Sbjct: 422 REMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKN 481

Query: 479 GHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTY 538
           G L  A  +F  +      P++ TYNIMI    KA   +   +L+ ++   G  P+ + Y
Sbjct: 482 GKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAY 541

Query: 539 SIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQ 598
           + ++      G  +EA+++  +M+    +P+   Y  L+    + G+   + E  + M  
Sbjct: 542 NTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDREASAELIKEMRS 601

Query: 599 AGLRPNVPTCNSLLSAFLRVGQLSDAY 625
            G   +  T   L++  L  G+L  ++
Sbjct: 602 CGFAGDASTI-GLVTNMLHDGRLDKSF 627



 Score =  106 bits (265), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 64/245 (26%), Positives = 121/245 (49%), Gaps = 1/245 (0%)

Query: 411 LNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSV 470
           +++A+D+F  M      P  V +  L+   AK    ++ + + ++MQ  G+S D +TYS+
Sbjct: 64  VDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSI 123

Query: 471 IINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAG 530
            INC  +   L  A  +  +M+  G  P++VT + ++     ++    A+ L   M   G
Sbjct: 124 FINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMG 183

Query: 531 FEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAW 590
           ++PD  T++ ++  L       EA A+  +M ++   PD   YG +V+   K G++  A 
Sbjct: 184 YKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLAL 243

Query: 591 EWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSC- 649
              + M +  +  +V   N+++    +   + DA +L   M N G++P + TY+ L+SC 
Sbjct: 244 SLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCL 303

Query: 650 CTEAR 654
           C   R
Sbjct: 304 CNYGR 308



 Score = 99.4 bits (246), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 60/202 (29%), Positives = 106/202 (52%), Gaps = 1/202 (0%)

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
           Q G   +  TYTT++    +AR       +  QMV  G  PN++TYN L+    +   L 
Sbjct: 426 QRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLA 485

Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
           +A+ VF+ +Q    EPD  TY  +I+   KAG ++   +++  +   G+SP+   Y+ +I
Sbjct: 486 KAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMI 545

Query: 473 NCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFE 532
           +   + G  + A  L  +M   G +PN  TYN +I  + +  + +++ +L ++M++ GF 
Sbjct: 546 SGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDREASAELIKEMRSCGFA 605

Query: 533 PDKVTYSIVMEVLGHCGYLDEA 554
            D  T  +V  +L H G LD++
Sbjct: 606 GDASTIGLVTNML-HDGRLDKS 626



 Score = 69.3 bits (168), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 45/174 (25%), Positives = 79/174 (45%)

Query: 470 VIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNA 529
           ++ N L     +  A  LF +MV     P++V +N +++  AK   ++  + L   MQ  
Sbjct: 53  ILRNRLSDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTL 112

Query: 530 GFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKA 589
           G   D  TYSI +        L  A AV A+M +  + PD      L++ +  +  +  A
Sbjct: 113 GISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDA 172

Query: 590 WEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTY 643
               + M++ G +P+  T  +L+       + S+A  L+  M+  G +P L TY
Sbjct: 173 VALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTY 226


>gi|224065693|ref|XP_002301924.1| predicted protein [Populus trichocarpa]
 gi|222843650|gb|EEE81197.1| predicted protein [Populus trichocarpa]
          Length = 709

 Score =  165 bits (418), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 93/318 (29%), Positives = 162/318 (50%)

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
           ++G   +E TY+ ++   G A ++ +   +L +M     QPN   ++R++ SY       
Sbjct: 369 RSGVLPNEQTYSLLIDAYGNAERWESARIVLKEMEASNVQPNAYVFSRILASYRDKGEWQ 428

Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
           +   V ++M+  G  PDR+ Y  LID   K   LD AM  + +M + G+ PDT T++ ++
Sbjct: 429 KTFQVLREMEDSGVRPDRIFYNVLIDTFGKFNCLDHAMATFDRMLSEGIEPDTITWNTLV 488

Query: 473 NCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFE 532
           +C  KAG    A +LF EM+ +G +P   T+NIMI        +     L  +M++ G  
Sbjct: 489 DCHCKAGKHDRAEELFEEMMEKGYLPCNTTFNIMINSFGDQERWDDVKNLLTNMRSQGLL 548

Query: 533 PDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEW 592
           P+ VTY+ ++++ G  G  D+A     +M+     P   +Y  L++ + + G   +A   
Sbjct: 549 PNAVTYTTLIDIYGKSGRFDDAIECLDDMKAAGLKPSSTMYNALLNAYAQRGLSDQAVSA 608

Query: 593 YEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTE 652
           + AM   GL+P++   NSL++AF +  +  +A+ +LQ M    LKP + TYT L+     
Sbjct: 609 FWAMRDDGLKPSLLALNSLINAFGKDRRDVEAFVVLQYMKENDLKPDVVTYTTLMKALIL 668

Query: 653 ARSPYDMGFCHELMAVSG 670
                 +   +E M +SG
Sbjct: 669 VEKFDKVPSVYEEMILSG 686



 Score =  137 bits (344), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 82/283 (28%), Positives = 138/283 (48%), Gaps = 3/283 (1%)

Query: 369 ILGRARQFGAINK---LLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVG 425
           IL   R  G   K   +L +M   G +P+ + YN LI ++G+ N L+ A+  F +M   G
Sbjct: 417 ILASYRDKGEWQKTFQVLREMEDSGVRPDRIFYNVLIDTFGKFNCLDHAMATFDRMLSEG 476

Query: 426 CEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAH 485
            EPD +T+ TL+D H KAG  D A +++++M   G  P   T++++IN  G         
Sbjct: 477 IEPDTITWNTLVDCHCKAGKHDRAEELFEEMMEKGYLPCNTTFNIMINSFGDQERWDDVK 536

Query: 486 QLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVL 545
            L   M +QG +PN VTY  +I +  K+  +  A++   DM+ AG +P    Y+ ++   
Sbjct: 537 NLLTNMRSQGLLPNAVTYTTLIDIYGKSGRFDDAIECLDDMKAAGLKPSSTMYNALLNAY 596

Query: 546 GHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNV 605
              G  D+A + F  MR     P       L++ +GK     +A+   + M +  L+P+V
Sbjct: 597 AQRGLSDQAVSAFWAMRDDGLKPSLLALNSLINAFGKDRRDVEAFVVLQYMKENDLKPDV 656

Query: 606 PTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
            T  +L+ A + V +      + + M+  G  P  +   +L S
Sbjct: 657 VTYTTLMKALILVEKFDKVPSVYEEMILSGCTPDRKARAMLRS 699



 Score =  136 bits (342), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 81/303 (26%), Positives = 145/303 (47%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           R  G +     Y  ++    +A        ++ +M R G  PN  TY+ LI +YG A   
Sbjct: 333 RDNGLQPRTRAYNALLRGYVKAGLLRDAEFVVSEMERSGVLPNEQTYSLLIDAYGNAERW 392

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
             A  V K+M+    +P+   +  ++  +   G       + ++M+ +G+ PD   Y+V+
Sbjct: 393 ESARIVLKEMEASNVQPNAYVFSRILASYRDKGEWQKTFQVLREMEDSGVRPDRIFYNVL 452

Query: 472 INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF 531
           I+  GK   L  A   F  M+++G  P+ +T+N ++    KA  +  A +L+ +M   G+
Sbjct: 453 IDTFGKFNCLDHAMATFDRMLSEGIEPDTITWNTLVDCHCKAGKHDRAEELFEEMMEKGY 512

Query: 532 EPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWE 591
            P   T++I++   G     D+ + +   MR +  +P+   Y  L+D++GK+G    A E
Sbjct: 513 LPCNTTFNIMINSFGDQERWDDVKNLLTNMRSQGLLPNAVTYTTLIDIYGKSGRFDDAIE 572

Query: 592 WYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCT 651
             + M  AGL+P+    N+LL+A+ + G    A      M + GLKPSL     L++   
Sbjct: 573 CLDDMKAAGLKPSSTMYNALLNAYAQRGLSDQAVSAFWAMRDDGLKPSLLALNSLINAFG 632

Query: 652 EAR 654
           + R
Sbjct: 633 KDR 635



 Score =  125 bits (313), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 105/476 (22%), Positives = 205/476 (43%), Gaps = 47/476 (9%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGA--INKLLDQMVRDGCQPNVVTYNRLIHSYGRAN 409
           R+ G+  D   Y+ ++  L +  +  +  + K+  ++ RD  + +V  +N +I  + +A 
Sbjct: 226 REDGYPSDLVNYSLIIRSLMKNNRANSSILQKIYREIDRDKLEVDVQLWNDIIVGFAKAG 285

Query: 410 YLNEALD-----------------------------------VFKQMQVVGCEPDRVTYC 434
            L++AL+                                   +F++M+  G +P    Y 
Sbjct: 286 DLDKALEFLGVVQGSGLSVKTATLVTVIWGLGNCGRTEEAEAIFEEMRDNGLQPRTRAYN 345

Query: 435 TLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQ 494
            L+  + KAG L  A  +  +M+ +G+ P+  TYS++I+  G A   ++A  +  EM   
Sbjct: 346 ALLRGYVKAGLLRDAEFVVSEMERSGVLPNEQTYSLLIDAYGNAERWESARIVLKEMEAS 405

Query: 495 GCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEA 554
              PN   ++ ++A       +Q   ++ R+M+++G  PD++ Y+++++  G    LD A
Sbjct: 406 NVQPNAYVFSRILASYRDKGEWQKTFQVLREMEDSGVRPDRIFYNVLIDTFGKFNCLDHA 465

Query: 555 EAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSA 614
            A F  M  +   PD   +  LVD   KAG   +A E +E M++ G  P   T N ++++
Sbjct: 466 MATFDRMLSEGIEPDTITWNTLVDCHCKAGKHDRAEELFEEMMEKGYLPCNTTFNIMINS 525

Query: 615 FLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGFCHELMAVSGHPAH 674
           F    +  D  +LL  M + GL P+  TYT L+    ++    D   C + M  +G    
Sbjct: 526 FGDQERWDDVKNLLTNMRSQGLLPNAVTYTTLIDIYGKSGRFDDAIECLDDMKAAGLKPS 585

Query: 675 MFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRESKRGLVDAVVDFLHKSGLKEEAGSVWE 734
             + +        + + D   S    M  +  +     ++++++   K     EA  V +
Sbjct: 586 STMYNALLNAYAQRGLSDQAVSAFWAMRDDGLKPSLLALNSLINAFGKDRRDVEAFVVLQ 645

Query: 735 VAAQKNVYPDAVKEKGMSYWLINLHVMSDGTAVIALSRTLAWFRKQMLISGVGPSR 790
              + ++ PD V    +   LI +       +V           ++M++SG  P R
Sbjct: 646 YMKENDLKPDVVTYTTLMKALILVEKFDKVPSVY----------EEMILSGCTPDR 691



 Score =  111 bits (277), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 93/377 (24%), Positives = 162/377 (42%), Gaps = 53/377 (14%)

Query: 237 VQPRSKAHSNRLNSNFKSNLQPSDAKVVECVSERFSKPSREMKIPAGLAPFSRHFASTGN 296
           +QPR++A++  L    K+ L   DA+ V    ER           +G+ P  + ++   +
Sbjct: 337 LQPRTRAYNALLRGYVKAGLL-RDAEFVVSEMER-----------SGVLPNEQTYSLLID 384

Query: 297 VVESVSRILRQWKWGPLAEEALGNTNYSMDAY----------------QANQVLKQLQDH 340
              +  R    W+   +  + +  +N   +AY                +  QVL++++D 
Sbjct: 385 AYGNAER----WESARIVLKEMEASNVQPNAYVFSRILASYRDKGEWQKTFQVLREMEDS 440

Query: 341 TV------------ALGFFNWLRR---------QAGFKHDEHTYTTMVGILGRARQFGAI 379
            V              G FN L             G + D  T+ T+V    +A +    
Sbjct: 441 GVRPDRIFYNVLIDTFGKFNCLDHAMATFDRMLSEGIEPDTITWNTLVDCHCKAGKHDRA 500

Query: 380 NKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDI 439
            +L ++M+  G  P   T+N +I+S+G     ++  ++   M+  G  P+ VTY TLIDI
Sbjct: 501 EELFEEMMEKGYLPCNTTFNIMINSFGDQERWDDVKNLLTNMRSQGLLPNAVTYTTLIDI 560

Query: 440 HAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPN 499
           + K+G  D A++    M+AAGL P +  Y+ ++N   + G    A   F  M + G  P+
Sbjct: 561 YGKSGRFDDAIECLDDMKAAGLKPSSTMYNALLNAYAQRGLSDQAVSAFWAMRDDGLKPS 620

Query: 500 LVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFA 559
           L+  N +I    K R    A  + + M+    +PD VTY+ +M+ L      D+  +V+ 
Sbjct: 621 LLALNSLINAFGKDRRDVEAFVVLQYMKENDLKPDVVTYTTLMKALILVEKFDKVPSVYE 680

Query: 560 EMRRKNWVPDEPVYGLL 576
           EM      PD     +L
Sbjct: 681 EMILSGCTPDRKARAML 697



 Score =  105 bits (262), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 106/427 (24%), Positives = 178/427 (41%), Gaps = 46/427 (10%)

Query: 342 VALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQ-FGAINKLLDQMVRDGCQPNVVTYNR 400
           +A    +WL++       E  Y+ ++  LG++ + + A   LL Q  +    P  +TYN 
Sbjct: 151 LAYAVVSWLQKHNLCFSYELLYSILIHALGQSEKLYEAF--LLSQ--KQNLTP--LTYNA 204

Query: 401 LIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLI----------------------- 437
           LI +  R N + +AL++  +M+  G   D V Y  +I                       
Sbjct: 205 LISACARNNDIEKALNLICRMREDGYPSDLVNYSLIIRSLMKNNRANSSILQKIYREIDR 264

Query: 438 -----------DI---HAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQA 483
                      DI    AKAG LD A++    +Q +GLS  T T   +I  LG  G  + 
Sbjct: 265 DKLEVDVQLWNDIIVGFAKAGDLDKALEFLGVVQGSGLSVKTATLVTVIWGLGNCGRTEE 324

Query: 484 AHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVME 543
           A  +F EM + G  P    YN ++    KA   + A  +  +M+ +G  P++ TYS++++
Sbjct: 325 AEAIFEEMRDNGLQPRTRAYNALLRGYVKAGLLRDAEFVVSEMERSGVLPNEQTYSLLID 384

Query: 544 VLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRP 603
             G+    + A  V  EM   N  P+  V+  ++  +   G  +K ++    M  +G+RP
Sbjct: 385 AYGNAERWESARIVLKEMEASNVQPNAYVFSRILASYRDKGEWQKTFQVLREMEDSGVRP 444

Query: 604 NVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSC-CTEARSPYDMGFC 662
           +    N L+  F +   L  A      ML+ G++P   T+  L+ C C   +        
Sbjct: 445 DRIFYNVLIDTFGKFNCLDHAMATFDRMLSEGIEPDTITWNTLVDCHCKAGKHDRAEELF 504

Query: 663 HELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRESKRGLVDAVVDFLHK 722
            E+M     P +     M +   D Q   D V + L  M S+           ++D   K
Sbjct: 505 EEMMEKGYLPCNTTFNIMINSFGD-QERWDDVKNLLTNMRSQGLLPNAVTYTTLIDIYGK 563

Query: 723 SGLKEEA 729
           SG  ++A
Sbjct: 564 SGRFDDA 570



 Score = 84.3 bits (207), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 47/195 (24%), Positives = 85/195 (43%)

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
           + G+     T+  M+   G   ++  +  LL  M   G  PN VTY  LI  YG++   +
Sbjct: 509 EKGYLPCNTTFNIMINSFGDQERWDDVKNLLTNMRSQGLLPNAVTYTTLIDIYGKSGRFD 568

Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
           +A++    M+  G +P    Y  L++ +A+ G  D A+  +  M+  GL P     + +I
Sbjct: 569 DAIECLDDMKAAGLKPSSTMYNALLNAYAQRGLSDQAVSAFWAMRDDGLKPSLLALNSLI 628

Query: 473 NCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFE 532
           N  GK      A  +   M      P++VTY  ++        +     +Y +M  +G  
Sbjct: 629 NAFGKDRRDVEAFVVLQYMKENDLKPDVVTYTTLMKALILVEKFDKVPSVYEEMILSGCT 688

Query: 533 PDKVTYSIVMEVLGH 547
           PD+   +++   L +
Sbjct: 689 PDRKARAMLRSALKY 703


>gi|302780004|ref|XP_002971777.1| hypothetical protein SELMODRAFT_96029 [Selaginella moellendorffii]
 gi|300160909|gb|EFJ27526.1| hypothetical protein SELMODRAFT_96029 [Selaginella moellendorffii]
          Length = 556

 Score =  165 bits (417), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 98/309 (31%), Positives = 168/309 (54%), Gaps = 6/309 (1%)

Query: 342 VALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRL 401
           +A+ FF+W   Q G+KHD H+Y  ++ IL ++       K+   ++  GC PN+VT+  L
Sbjct: 9   LAIQFFDWAGEQDGYKHDVHSYNHLLDILVKSGHQFRTGKVYKDLLHSGCSPNLVTFKIL 68

Query: 402 IHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGL 461
           I    +A     AL+  + +      PD   +  LI    K G  D A+ +++ M+++ +
Sbjct: 69  IRGNCKAGQATRALEFLRALDEFSVAPDVYIFNFLIHGLFKDGNPDQAVKLFENMESSRV 128

Query: 462 SPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQG--CIPNLVTYNIMI-ALQAKARNYQS 518
           +PD FTY+ +I+ L K+G+L+ A +L  EM+ +G    P++VTYN +I A   K  + + 
Sbjct: 129 NPDIFTYNTVISGLCKSGNLEKARELLEEMIRRGGKSAPDIVTYNTLINAGICKDGDVEE 188

Query: 519 ALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVD 578
           AL++   M+ AG  PD +TY+ ++  L   G + EA  +   M   +  PD   +  L+D
Sbjct: 189 ALEILDGMKLAGPAPDVITYNSIIHALCVAGRVVEAAEILKTM---SCSPDLVTFNTLLD 245

Query: 579 LWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKP 638
            + KAG + +A E  E M +  + P+V T   L++   RVGQ+  A++LL+ ++  G  P
Sbjct: 246 GFCKAGMLPRALEVLEEMCRENILPDVITYTILVNGLCRVGQVQVAFYLLEEIVRQGYIP 305

Query: 639 SLQTYTLLL 647
            +  YT L+
Sbjct: 306 DVIAYTSLV 314



 Score =  147 bits (372), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 97/309 (31%), Positives = 159/309 (51%), Gaps = 15/309 (4%)

Query: 350 LRRQAGFKHDEHTYTTMV--GILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGR 407
           +RR      D  TY T++  GI        A+ ++LD M   G  P+V+TYN +IH+   
Sbjct: 159 IRRGGKSAPDIVTYNTLINAGICKDGDVEEAL-EILDGMKLAGPAPDVITYNSIIHALCV 217

Query: 408 ANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFT 467
           A  + EA ++ K M    C PD VT+ TL+D   KAG L  A+++ ++M    + PD  T
Sbjct: 218 AGRVVEAAEILKTMS---CSPDLVTFNTLLDGFCKAGMLPRALEVLEEMCRENILPDVIT 274

Query: 468 YSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQ 527
           Y++++N L + G +Q A  L  E+V QG IP+++ Y  ++    K+   + A KL ++M 
Sbjct: 275 YTILVNGLCRVGQVQVAFYLLEEIVRQGYIPDVIAYTSLVDGLCKSGEIEEAHKLVKEMS 334

Query: 528 ---------NAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVD 578
                    +    P   TY+IV+  L   G + +A ++ +++  + +VPD   Y  L+D
Sbjct: 335 AREILAEMVSINMVPPLFTYNIVLGGLIKDGSISKAVSLISDLVARGYVPDVVTYNTLID 394

Query: 579 LWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKP 638
              KA  VR+A +  + M   G  PN  T  S++    RVG++ DA+ L+  M      P
Sbjct: 395 GLCKANRVREACDLADEMASLGCFPNDVTLGSVVFGLCRVGRVDDAWSLVVEMSRKRHAP 454

Query: 639 SLQTYTLLL 647
           ++  YT L+
Sbjct: 455 NVVVYTSLI 463



 Score =  112 bits (281), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 78/293 (26%), Positives = 142/293 (48%), Gaps = 9/293 (3%)

Query: 359 DEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVF 418
           D  T+ T++    +A       ++L++M R+   P+V+TY  L++   R   +  A  + 
Sbjct: 236 DLVTFNTLLDGFCKAGMLPRALEVLEEMCRENILPDVITYTILVNGLCRVGQVQVAFYLL 295

Query: 419 KQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQA---------AGLSPDTFTYS 469
           +++   G  PD + Y +L+D   K+G ++ A  + K+M A           + P  FTY+
Sbjct: 296 EEIVRQGYIPDVIAYTSLVDGLCKSGEIEEAHKLVKEMSAREILAEMVSINMVPPLFTYN 355

Query: 470 VIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNA 529
           +++  L K G +  A  L  ++V +G +P++VTYN +I    KA   + A  L  +M + 
Sbjct: 356 IVLGGLIKDGSISKAVSLISDLVARGYVPDVVTYNTLIDGLCKANRVREACDLADEMASL 415

Query: 530 GFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKA 589
           G  P+ VT   V+  L   G +D+A ++  EM RK   P+  VY  L+D   K+  +  A
Sbjct: 416 GCFPNDVTLGSVVFGLCRVGRVDDAWSLVVEMSRKRHAPNVVVYTSLIDGLCKSDRMDDA 475

Query: 590 WEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQT 642
               +AM   G+  +      L+ + +  G++++A  +   M+  G  P   T
Sbjct: 476 CVVLDAMRGQGVALDDFAYRKLIVSMIHGGRVAEAMAMYDEMVARGFLPDGST 528



 Score = 96.3 bits (238), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 72/265 (27%), Positives = 116/265 (43%), Gaps = 9/265 (3%)

Query: 359 DEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVF 418
           D  TYT +V  L R  Q      LL+++VR G  P+V+ Y  L+    ++  + EA  + 
Sbjct: 271 DVITYTILVNGLCRVGQVQVAFYLLEEIVRQGYIPDVIAYTSLVDGLCKSGEIEEAHKLV 330

Query: 419 KQMQV---------VGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYS 469
           K+M           +   P   TY  ++    K G +  A+ +   + A G  PD  TY+
Sbjct: 331 KEMSAREILAEMVSINMVPPLFTYNIVLGGLIKDGSISKAVSLISDLVARGYVPDVVTYN 390

Query: 470 VIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNA 529
            +I+ L KA  ++ A  L  EM + GC PN VT   ++    +      A  L  +M   
Sbjct: 391 TLIDGLCKANRVREACDLADEMASLGCFPNDVTLGSVVFGLCRVGRVDDAWSLVVEMSRK 450

Query: 530 GFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKA 589
              P+ V Y+ +++ L     +D+A  V   MR +    D+  Y  L+      G V +A
Sbjct: 451 RHAPNVVVYTSLIDGLCKSDRMDDACVVLDAMRGQGVALDDFAYRKLIVSMIHGGRVAEA 510

Query: 590 WEWYEAMLQAGLRPNVPTCNSLLSA 614
              Y+ M+  G  P+  T  +L  A
Sbjct: 511 MAMYDEMVARGFLPDGSTSKTLEEA 535



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 41/145 (28%), Positives = 70/145 (48%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           G+  D  TY T++  L +A +      L D+M   GC PN VT   ++    R   +++A
Sbjct: 381 GYVPDVVTYNTLIDGLCKANRVREACDLADEMASLGCFPNDVTLGSVVFGLCRVGRVDDA 440

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
             +  +M      P+ V Y +LID   K+  +D A  +   M+  G++ D F Y  +I  
Sbjct: 441 WSLVVEMSRKRHAPNVVVYTSLIDGLCKSDRMDDACVVLDAMRGQGVALDDFAYRKLIVS 500

Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPN 499
           +   G +  A  ++ EMV +G +P+
Sbjct: 501 MIHGGRVAEAMAMYDEMVARGFLPD 525



 Score = 42.4 bits (98), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 26/122 (21%), Positives = 57/122 (46%)

Query: 527 QNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNV 586
           +  G++ D  +Y+ ++++L   G+      V+ ++      P+   + +L+    KAG  
Sbjct: 19  EQDGYKHDVHSYNHLLDILVKSGHQFRTGKVYKDLLHSGCSPNLVTFKILIRGNCKAGQA 78

Query: 587 RKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLL 646
            +A E+  A+ +  + P+V   N L+    + G    A  L + M +  + P + TY  +
Sbjct: 79  TRALEFLRALDEFSVAPDVYIFNFLIHGLFKDGNPDQAVKLFENMESSRVNPDIFTYNTV 138

Query: 647 LS 648
           +S
Sbjct: 139 IS 140


>gi|302757525|ref|XP_002962186.1| hypothetical protein SELMODRAFT_76934 [Selaginella moellendorffii]
 gi|300170845|gb|EFJ37446.1| hypothetical protein SELMODRAFT_76934 [Selaginella moellendorffii]
          Length = 855

 Score =  165 bits (417), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 96/332 (28%), Positives = 164/332 (49%), Gaps = 36/332 (10%)

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
           Q G   D  TYTT++    +A +     KLLD M+  G +P  VTY  ++H + + + +N
Sbjct: 461 QKGCVPDTITYTTLIDGFSKASKMDEARKLLDVMLTKGPEPTAVTYGSIVHGFCKLDMIN 520

Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
           EA +V  QM+  GCEP    + +L+  +   G  + A  +  +M A G +PD   Y+ +I
Sbjct: 521 EAKEVIAQMRERGCEPGLFIFTSLLSYYLSKGRAEEAYQVLTEMTARGCAPDVILYTSLI 580

Query: 473 NCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSA------------- 519
           + L   G +  A  +F  M+ +GC P+ +TY  +I   +K  N ++A             
Sbjct: 581 DLLFSTGRVPEARHVFDSMIEKGCAPDALTYGTIIQNFSKIGNVEAAGEILELMAKSGVG 640

Query: 520 ----------------------LKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAV 557
                                   +Y  M  +G +P+ VT++++M  L   G  D A ++
Sbjct: 641 PDCFAYNSLMDGYVKLERVDQAFGVYDRMVASGIKPNAVTFNVLMHGLFKDGKTDRAFSL 700

Query: 558 FAEMRRKNWVPDEPV-YGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFL 616
           F EM  K+ VP   V Y +L+D  GKAG V +A+  ++ M+  G+ P   T  SL+ +  
Sbjct: 701 FKEMLEKDEVPPTLVSYTILIDGLGKAGRVSEAFSQFQEMIDRGIIPECHTYTSLIYSLA 760

Query: 617 RVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
           + G++ +A  L++ M+ LG+ P +Q Y+ L++
Sbjct: 761 KAGRIPEAKKLVEDMVKLGVNPDVQAYSALIT 792



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 128/514 (24%), Positives = 224/514 (43%), Gaps = 34/514 (6%)

Query: 315 EEALGNTNYSMDAYQANQVLKQLQDHT---VALGFFNWLRRQAGFKHDEHTYTTMVGILG 371
           EEA    + ++D      V+K L D      A   F  L+  AG   +   YT ++  L 
Sbjct: 351 EEAKAFFDEALDVISYTTVIKGLADSKRIDEACELFEKLK-TAGCSPNVVAYTAVIDGLL 409

Query: 372 RARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRV 431
           +A +     K  + M    C P   TY  +I    +A  L +A  VF+QM   GC PD +
Sbjct: 410 KAGRIEDGLKNFEDMSGSSCVPTRTTYTVVIDGLCKAQMLPDACKVFEQMVQKGCVPDTI 469

Query: 432 TYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEM 491
           TY TLID  +KA  +D A  +   M   G  P   TY  I++   K   +  A ++  +M
Sbjct: 470 TYTTLIDGFSKASKMDEARKLLDVMLTKGPEPTAVTYGSIVHGFCKLDMINEAKEVIAQM 529

Query: 492 VNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYL 551
             +GC P L  +  +++        + A ++  +M   G  PD + Y+ ++++L   G +
Sbjct: 530 RERGCEPGLFIFTSLLSYYLSKGRAEEAYQVLTEMTARGCAPDVILYTSLIDLLFSTGRV 589

Query: 552 DEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSL 611
            EA  VF  M  K   PD   YG ++  + K GNV  A E  E M ++G+ P+    NSL
Sbjct: 590 PEARHVFDSMIEKGCAPDALTYGTIIQNFSKIGNVEAAGEILELMAKSGVGPDCFAYNSL 649

Query: 612 LSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL-SCCTEARSPYDMGFCHELMAVSG 670
           +  ++++ ++  A+ +   M+  G+KP+  T+ +L+     + ++        E++    
Sbjct: 650 MDGYVKLERVDQAFGVYDRMVASGIKPNAVTFNVLMHGLFKDGKTDRAFSLFKEMLEKDE 709

Query: 671 HPAHM--FLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRESKRGLV------DAVVDFLHK 722
            P  +  + + +   G  G+ V +    F EM+        RG++       +++  L K
Sbjct: 710 VPPTLVSYTILIDGLGKAGR-VSEAFSQFQEMID-------RGIIPECHTYTSLIYSLAK 761

Query: 723 SGLKEEAGSVWEVAAQKNVYPDAVKEKGMSYWLINLHVMSDGTAVIALSRTLAW-FRKQM 781
           +G   EA  + E   +  V PD      +   LI+  ++             AW   ++M
Sbjct: 762 AGRIPEAKKLVEDMVKLGVNPDVQAYSALITGLIDSSMVDT-----------AWDVFQEM 810

Query: 782 LISGVGPSRIDIVTGWGRRSRVTGTSLVRQAVQE 815
           +  G  P+ +       R  R  G +L  +AV++
Sbjct: 811 MKRGCAPNEVTYKV-LRRGFRAAGRALDLEAVKQ 843



 Score =  142 bits (359), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 92/328 (28%), Positives = 158/328 (48%), Gaps = 7/328 (2%)

Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLI 402
           AL  F  L    G K +  TYTT++  L  A++        D+ +      +V++Y  +I
Sbjct: 318 ALELFKLLSSY-GCKPNAATYTTIIQGLYDAQRMEEAKAFFDEAL------DVISYTTVI 370

Query: 403 HSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLS 462
                +  ++EA ++F++++  GC P+ V Y  +ID   KAG ++  +  ++ M  +   
Sbjct: 371 KGLADSKRIDEACELFEKLKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEDMSGSSCV 430

Query: 463 PDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKL 522
           P   TY+V+I+ L KA  L  A ++F +MV +GC+P+ +TY  +I   +KA     A KL
Sbjct: 431 PTRTTYTVVIDGLCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSKASKMDEARKL 490

Query: 523 YRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGK 582
              M   G EP  VTY  ++        ++EA+ V A+MR +   P   ++  L+  +  
Sbjct: 491 LDVMLTKGPEPTAVTYGSIVHGFCKLDMINEAKEVIAQMRERGCEPGLFIFTSLLSYYLS 550

Query: 583 AGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQT 642
            G   +A++    M   G  P+V    SL+      G++ +A H+   M+  G  P   T
Sbjct: 551 KGRAEEAYQVLTEMTARGCAPDVILYTSLIDLLFSTGRVPEARHVFDSMIEKGCAPDALT 610

Query: 643 YTLLLSCCTEARSPYDMGFCHELMAVSG 670
           Y  ++   ++  +    G   ELMA SG
Sbjct: 611 YGTIIQNFSKIGNVEAAGEILELMAKSG 638



 Score =  140 bits (353), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 86/279 (30%), Positives = 138/279 (49%), Gaps = 1/279 (0%)

Query: 370 LGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPD 429
           L +AR+     +L  +M   GC+P +V+YN +I      + ++EA   F  M   GCEPD
Sbjct: 30  LCKARKIDKAIELFLEMPSMGCEPTIVSYNTVISGLASIDKMDEAYKFFNSMIDNGCEPD 89

Query: 430 RVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFC 489
            + + TLI    KAG   V   M          PD F Y+ +I+   KAG L    ++  
Sbjct: 90  VIAFTTLIHGFCKAGQPQVG-HMLLNQALKRFRPDVFLYTSVIHGYCKAGDLDTGFKILE 148

Query: 490 EMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCG 549
           EM+  GCIP+   Y ++I    K      A +L+  M+ +G   D VT+  ++E L + G
Sbjct: 149 EMLAAGCIPDAAAYFVLIDPLCKLGRVDEAYELFERMRKSGCLGDYVTFMTLIEALSNHG 208

Query: 550 YLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCN 609
            LDEA  ++ EM  + + P   V   L+    KAG V +A E Y+ ++   +  +    N
Sbjct: 209 KLDEACELYREMIERGYEPYLEVQDSLIFALCKAGKVDEANEIYQTVVAKKVATSRVAYN 268

Query: 610 SLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
           SL+  + ++G++ D   LL  M+     P +QTY +L++
Sbjct: 269 SLMDGYCKLGRVDDGLKLLLQMVECDNFPDIQTYNILVA 307



 Score =  139 bits (350), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 85/293 (29%), Positives = 141/293 (48%), Gaps = 15/293 (5%)

Query: 362 TYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRAN-------YLNEA 414
           +Y T++  L    +     K  + M+ +GC+P+V+ +  LIH + +A         LN+A
Sbjct: 57  SYNTVISGLASIDKMDEAYKFFNSMIDNGCEPDVIAFTTLIHGFCKAGQPQVGHMLLNQA 116

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
           L  F+        PD   Y ++I  + KAG LD    + ++M AAG  PD   Y V+I+ 
Sbjct: 117 LKRFR--------PDVFLYTSVIHGYCKAGDLDTGFKILEEMLAAGCIPDAAAYFVLIDP 168

Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPD 534
           L K G +  A++LF  M   GC+ + VT+  +I   +       A +LYR+M   G+EP 
Sbjct: 169 LCKLGRVDEAYELFERMRKSGCLGDYVTFMTLIEALSNHGKLDEACELYREMIERGYEPY 228

Query: 535 KVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYE 594
                 ++  L   G +DEA  ++  +  K        Y  L+D + K G V    +   
Sbjct: 229 LEVQDSLIFALCKAGKVDEANEIYQTVVAKKVATSRVAYNSLMDGYCKLGRVDDGLKLLL 288

Query: 595 AMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
            M++    P++ T N L++ F R  +L DA  L + + + G KP+  TYT ++
Sbjct: 289 QMVECDNFPDIQTYNILVAGFSRANRLDDALELFKLLSSYGCKPNAATYTTII 341



 Score =  120 bits (300), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 77/282 (27%), Positives = 135/282 (47%), Gaps = 5/282 (1%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           G   D   YT+++ +L    +      + D M+  GC P+ +TY  +I ++ +   +  A
Sbjct: 568 GCAPDVILYTSLIDLLFSTGRVPEARHVFDSMIEKGCAPDALTYGTIIQNFSKIGNVEAA 627

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
            ++ + M   G  PD   Y +L+D + K   +D A  +Y +M A+G+ P+  T++V+++ 
Sbjct: 628 GEILELMAKSGVGPDCFAYNSLMDGYVKLERVDQAFGVYDRMVASGIKPNAVTFNVLMHG 687

Query: 475 LGKAGHLQAAHQLFCEMVNQGCIP-NLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEP 533
           L K G    A  LF EM+ +  +P  LV+Y I+I    KA     A   +++M + G  P
Sbjct: 688 LFKDGKTDRAFSLFKEMLEKDEVPPTLVSYTILIDGLGKAGRVSEAFSQFQEMIDRGIIP 747

Query: 534 DKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWY 593
           +  TY+ ++  L   G + EA+ +  +M +    PD   Y  L+     +  V  AW+ +
Sbjct: 748 ECHTYTSLIYSLAKAGRIPEAKKLVEDMVKLGVNPDVQAYSALITGLIDSSMVDTAWDVF 807

Query: 594 EAMLQAGLRPNVPTCNSLLSAFLRVGQLSD----AYHLLQGM 631
           + M++ G  PN  T   L   F   G+  D      H  QG+
Sbjct: 808 QEMMKRGCAPNEVTYKVLRRGFRAAGRALDLEAVKQHFSQGV 849



 Score =  118 bits (296), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 97/407 (23%), Positives = 182/407 (44%), Gaps = 14/407 (3%)

Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLI 402
           A  FFN +    G + D   +TT++    +A Q    + LL+Q ++   +P+V  Y  +I
Sbjct: 74  AYKFFNSMIDN-GCEPDVIAFTTLIHGFCKAGQPQVGHMLLNQALKR-FRPDVFLYTSVI 131

Query: 403 HSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLS 462
           H Y +A  L+    + ++M   GC PD   Y  LID   K G +D A +++++M+ +G  
Sbjct: 132 HGYCKAGDLDTGFKILEEMLAAGCIPDAAAYFVLIDPLCKLGRVDEAYELFERMRKSGCL 191

Query: 463 PDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKL 522
            D  T+  +I  L   G L  A +L+ EM+ +G  P L   + +I    KA     A ++
Sbjct: 192 GDYVTFMTLIEALSNHGKLDEACELYREMIERGYEPYLEVQDSLIFALCKAGKVDEANEI 251

Query: 523 YRDMQNAGFEPDKVTYSIVMEVLGHC--GYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLW 580
           Y+ +        +V Y+ +M+  G+C  G +D+   +  +M   +  PD   Y +LV  +
Sbjct: 252 YQTVVAKKVATSRVAYNSLMD--GYCKLGRVDDGLKLLLQMVECDNFPDIQTYNILVAGF 309

Query: 581 GKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSL 640
            +A  +  A E ++ +   G +PN  T  +++       ++ +A       L+      +
Sbjct: 310 SRANRLDDALELFKLLSSYGCKPNAATYTTIIQGLYDAQRMEEAKAFFDEALD------V 363

Query: 641 QTYTLLLSCCTEARSPYDMGFCHELMAVSGHPAHMFLLSMPSPG-PDGQNVRDHVGSFLE 699
            +YT ++    +++   +     E +  +G   ++   +    G      + D + +F E
Sbjct: 364 ISYTTVIKGLADSKRIDEACELFEKLKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNF-E 422

Query: 700 MMHSEDRESKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAV 746
            M        R     V+D L K+ +  +A  V+E   QK   PD +
Sbjct: 423 DMSGSSCVPTRTTYTVVIDGLCKAQMLPDACKVFEQMVQKGCVPDTI 469



 Score =  108 bits (269), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 69/247 (27%), Positives = 120/247 (48%), Gaps = 6/247 (2%)

Query: 411 LNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSV 470
           + EALD  K+M   G  PD V    +++   KA  +D A++++ +M + G  P   +Y+ 
Sbjct: 1   MEEALDCLKEMHTTGLMPDVVNCNIVLNGLCKARKIDKAIELFLEMPSMGCEPTIVSYNT 60

Query: 471 IINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAG 530
           +I+ L     +  A++ F  M++ GC P+++ +  +I    KA   Q    L        
Sbjct: 61  VISGLASIDKMDEAYKFFNSMIDNGCEPDVIAFTTLIHGFCKAGQPQVGHMLLNQALKR- 119

Query: 531 FEPDKVTYSIVMEVLGHC--GYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRK 588
           F PD   Y+ V+   G+C  G LD    +  EM     +PD   Y +L+D   K G V +
Sbjct: 120 FRPDVFLYTSVIH--GYCKAGDLDTGFKILEEMLAAGCIPDAAAYFVLIDPLCKLGRVDE 177

Query: 589 AWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTY-TLLL 647
           A+E +E M ++G   +  T  +L+ A    G+L +A  L + M+  G +P L+   +L+ 
Sbjct: 178 AYELFERMRKSGCLGDYVTFMTLIEALSNHGKLDEACELYREMIERGYEPYLEVQDSLIF 237

Query: 648 SCCTEAR 654
           + C   +
Sbjct: 238 ALCKAGK 244



 Score = 90.9 bits (224), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 73/323 (22%), Positives = 130/323 (40%), Gaps = 36/323 (11%)

Query: 446 LDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNI 505
           ++ A+D  K+M   GL PD    ++++N L KA  +  A +LF EM + GC P +V+YN 
Sbjct: 1   MEEALDCLKEMHTTGLMPDVVNCNIVLNGLCKARKIDKAIELFLEMPSMGCEPTIVSYNT 60

Query: 506 MIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKN 565
           +I+  A       A K +  M + G EPD + ++ ++      G   +   +      K 
Sbjct: 61  VISGLASIDKMDEAYKFFNSMIDNGCEPDVIAFTTLIHGFCKAGQ-PQVGHMLLNQALKR 119

Query: 566 WVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAY 625
           + PD  +Y  ++  + KAG++   ++  E ML AG  P+      L+    ++G++ +AY
Sbjct: 120 FRPDVFLYTSVIHGYCKAGDLDTGFKILEEMLAAGCIPDAAAYFVLIDPLCKLGRVDEAY 179

Query: 626 HLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGFCHELMAVSGHPAHMFLLSMPSPGP 685
            L + M   G      T+  L+                   A+S H              
Sbjct: 180 ELFERMRKSGCLGDYVTFMTLIE------------------ALSNH-------------- 207

Query: 686 DGQNVRDHVGSFLEMMHSEDRESKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDA 745
                 D        M     E    + D+++  L K+G  +EA  +++    K V    
Sbjct: 208 ---GKLDEACELYREMIERGYEPYLEVQDSLIFALCKAGKVDEANEIYQTVVAKKVATSR 264

Query: 746 VKEKGMSYWLINLHVMSDGTAVI 768
           V    +      L  + DG  ++
Sbjct: 265 VAYNSLMDGYCKLGRVDDGLKLL 287



 Score = 81.6 bits (200), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 72/292 (24%), Positives = 130/292 (44%), Gaps = 17/292 (5%)

Query: 216 SNGTSLETHNVSSDNSDRRRIVQPRSKAHSNRLNSNFKSNLQPSDAKVVECVSERFSKPS 275
           S G + E + V ++ + R     P    +++ ++  F +   P    V + + E+   P 
Sbjct: 550 SKGRAEEAYQVLTEMTARG--CAPDVILYTSLIDLLFSTGRVPEARHVFDSMIEKGCAPD 607

Query: 276 REMKIPAGLAPFSRHFASTGNVVESVSRILRQWKWGPLAEEALGNTNYSMDAYQANQVLK 335
                        ++F+  GNV E+   IL       +  +     N  MD Y   + + 
Sbjct: 608 -----ALTYGTIIQNFSKIGNV-EAAGEILELMAKSGVGPDCFAY-NSLMDGYVKLERVD 660

Query: 336 QLQDHTVALGFFNWLRRQAGFKHDEHTYTTMV-GILGRARQFGAINKLLDQMVRDGCQPN 394
           Q      A G ++ +   +G K +  T+  ++ G+    +   A +   + + +D   P 
Sbjct: 661 Q------AFGVYDRMV-ASGIKPNAVTFNVLMHGLFKDGKTDRAFSLFKEMLEKDEVPPT 713

Query: 395 VVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYK 454
           +V+Y  LI   G+A  ++EA   F++M   G  P+  TY +LI   AKAG +  A  + +
Sbjct: 714 LVSYTILIDGLGKAGRVSEAFSQFQEMIDRGIIPECHTYTSLIYSLAKAGRIPEAKKLVE 773

Query: 455 KMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIM 506
            M   G++PD   YS +I  L  +  +  A  +F EM+ +GC PN VTY ++
Sbjct: 774 DMVKLGVNPDVQAYSALITGLIDSSMVDTAWDVFQEMMKRGCAPNEVTYKVL 825


>gi|302763353|ref|XP_002965098.1| hypothetical protein SELMODRAFT_83321 [Selaginella moellendorffii]
 gi|300167331|gb|EFJ33936.1| hypothetical protein SELMODRAFT_83321 [Selaginella moellendorffii]
          Length = 600

 Score =  165 bits (417), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 96/332 (28%), Positives = 163/332 (49%), Gaps = 36/332 (10%)

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
           Q G   D  TYTT++    +A +     KLLD M+  G +P  VTY  ++H + + + +N
Sbjct: 206 QKGCVPDTITYTTLIDGFSKASKMDEARKLLDVMLTKGPEPTAVTYGSIVHGFCKLDMIN 265

Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
           EA +V  QM+  GCEP    + +L+  +   G  + A  +  +M A G +PD   Y+ +I
Sbjct: 266 EAKEVIAQMRERGCEPGLFIFTSLLSYYLSKGRAEEAYQVLTEMTARGCAPDVILYTSLI 325

Query: 473 NCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSA------------- 519
           + L   G +  A  +F  M+ +GC P+ +TY  +I   +K  N ++A             
Sbjct: 326 DLLFSTGRVPEARHVFDSMIEKGCAPDALTYGTIIQNFSKIGNVEAAGEILELMAKSGVG 385

Query: 520 ----------------------LKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAV 557
                                   +Y  M  +G +P+ VT++++M  L   G  D A ++
Sbjct: 386 PDCFAYNSLMDGYVKLERVDQAFGVYDRMVASGIKPNAVTFNVLMHGLFKDGKTDRAFSL 445

Query: 558 FAEMRRKNWVPDEPV-YGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFL 616
           F EM  K  VP   V Y +L+D  GKAG V +A+  ++ M+  G+ P   T  SL+ +  
Sbjct: 446 FKEMLEKEEVPPTLVSYTILIDGLGKAGRVSEAFLQFQEMIDRGIIPECHTYTSLIYSLA 505

Query: 617 RVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
           + G++ +A  L++ M+ LG+ P +Q Y+ L++
Sbjct: 506 KAGRIPEAKKLVEDMVKLGVNPDVQAYSALIT 537



 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 94/327 (28%), Positives = 156/327 (47%), Gaps = 4/327 (1%)

Query: 324 SMDAYQANQVLKQLQDHT---VALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAIN 380
           S+D      V+K L D      A   F  L+  AG   +   YT ++  L +A +     
Sbjct: 105 SLDVISYTTVIKGLADSKRIDEACELFEELK-TAGCSPNVVAYTAVIDGLLKAGRIEDGL 163

Query: 381 KLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIH 440
           K  ++M    C P   TY  +I    +A  L +A  VF+QM   GC PD +TY TLID  
Sbjct: 164 KNFEEMSGSSCVPTRTTYTVVIDGLCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGF 223

Query: 441 AKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNL 500
           +KA  +D A  +   M   G  P   TY  I++   K   +  A ++  +M  +GC P L
Sbjct: 224 SKASKMDEARKLLDVMLTKGPEPTAVTYGSIVHGFCKLDMINEAKEVIAQMRERGCEPGL 283

Query: 501 VTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAE 560
             +  +++        + A ++  +M   G  PD + Y+ ++++L   G + EA  VF  
Sbjct: 284 FIFTSLLSYYLSKGRAEEAYQVLTEMTARGCAPDVILYTSLIDLLFSTGRVPEARHVFDS 343

Query: 561 MRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQ 620
           M  K   PD   YG ++  + K GNV  A E  E M ++G+ P+    NSL+  ++++ +
Sbjct: 344 MIEKGCAPDALTYGTIIQNFSKIGNVEAAGEILELMAKSGVGPDCFAYNSLMDGYVKLER 403

Query: 621 LSDAYHLLQGMLNLGLKPSLQTYTLLL 647
           +  A+ +   M+  G+KP+  T+ +L+
Sbjct: 404 VDQAFGVYDRMVASGIKPNAVTFNVLM 430



 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 107/397 (26%), Positives = 179/397 (45%), Gaps = 32/397 (8%)

Query: 362 TYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRA-------NYLNEA 414
           +Y T++  L    +     K  + M+ +GC+P+V+ +  LIH + +A         LN+A
Sbjct: 9   SYNTVISGLASIDKMDEAYKFFNSMIDNGCEPDVIAFTTLIHGFCKAGQPQVGHKLLNQA 68

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
           L  F+        PD   Y ++I  + KAG LD     Y +      S D  +Y+ +I  
Sbjct: 69  LKRFR--------PDVFLYTSVIHGYCKAGDLDTG---YFRAVTPKASLDVISYTTVIKG 117

Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPD 534
           L  +  +  A +LF E+   GC PN+V Y  +I    KA   +  LK + +M  +   P 
Sbjct: 118 LADSKRIDEACELFEELKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEEMSGSSCVPT 177

Query: 535 KVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYE 594
           + TY++V++ L     L +A  VF +M +K  VPD   Y  L+D + KA  + +A +  +
Sbjct: 178 RTTYTVVIDGLCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSKASKMDEARKLLD 237

Query: 595 AMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS-CCTEA 653
            ML  G  P   T  S++  F ++  +++A  ++  M   G +P L  +T LLS   ++ 
Sbjct: 238 VMLTKGPEPTAVTYGSIVHGFCKLDMINEAKEVIAQMRERGCEPGLFIFTSLLSYYLSKG 297

Query: 654 RSPYDMGFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRESKRGLV 713
           R+        E+ A    P  +   S+        ++    G   E  H  D   ++G  
Sbjct: 298 RAEEAYQVLTEMTARGCAPDVILYTSL-------IDLLFSTGRVPEARHVFDSMIEKGCA 350

Query: 714 -DA-----VVDFLHKSGLKEEAGSVWEVAAQKNVYPD 744
            DA     ++    K G  E AG + E+ A+  V PD
Sbjct: 351 PDALTYGTIIQNFSKIGNVEAAGEILELMAKSGVGPD 387



 Score =  140 bits (352), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 98/360 (27%), Positives = 166/360 (46%), Gaps = 34/360 (9%)

Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLI 402
           A  FFN +    G + D   +TT++    +A Q    +KLL+Q ++   +P+V  Y  +I
Sbjct: 26  AYKFFNSMIDN-GCEPDVIAFTTLIHGFCKAGQPQVGHKLLNQALKR-FRPDVFLYTSVI 83

Query: 403 HSYGRANYLN--------------------------------EALDVFKQMQVVGCEPDR 430
           H Y +A  L+                                EA ++F++++  GC P+ 
Sbjct: 84  HGYCKAGDLDTGYFRAVTPKASLDVISYTTVIKGLADSKRIDEACELFEELKTAGCSPNV 143

Query: 431 VTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCE 490
           V Y  +ID   KAG ++  +  +++M  +   P   TY+V+I+ L KA  L  A ++F +
Sbjct: 144 VAYTAVIDGLLKAGRIEDGLKNFEEMSGSSCVPTRTTYTVVIDGLCKAQMLPDACKVFEQ 203

Query: 491 MVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGY 550
           MV +GC+P+ +TY  +I   +KA     A KL   M   G EP  VTY  ++        
Sbjct: 204 MVQKGCVPDTITYTTLIDGFSKASKMDEARKLLDVMLTKGPEPTAVTYGSIVHGFCKLDM 263

Query: 551 LDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNS 610
           ++EA+ V A+MR +   P   ++  L+  +   G   +A++    M   G  P+V    S
Sbjct: 264 INEAKEVIAQMRERGCEPGLFIFTSLLSYYLSKGRAEEAYQVLTEMTARGCAPDVILYTS 323

Query: 611 LLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGFCHELMAVSG 670
           L+      G++ +A H+   M+  G  P   TY  ++   ++  +    G   ELMA SG
Sbjct: 324 LIDLLFSTGRVPEARHVFDSMIEKGCAPDALTYGTIIQNFSKIGNVEAAGEILELMAKSG 383



 Score =  133 bits (335), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 81/277 (29%), Positives = 141/277 (50%), Gaps = 4/277 (1%)

Query: 371 GRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDR 430
           GRA +     ++L +M   GC P+V+ Y  LI        + EA  VF  M   GC PD 
Sbjct: 297 GRAEE---AYQVLTEMTARGCAPDVILYTSLIDLLFSTGRVPEARHVFDSMIEKGCAPDA 353

Query: 431 VTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCE 490
           +TY T+I   +K G ++ A ++ + M  +G+ PD F Y+ +++   K   +  A  ++  
Sbjct: 354 LTYGTIIQNFSKIGNVEAAGEILELMAKSGVGPDCFAYNSLMDGYVKLERVDQAFGVYDR 413

Query: 491 MVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDM-QNAGFEPDKVTYSIVMEVLGHCG 549
           MV  G  PN VT+N+++    K      A  L+++M +     P  V+Y+I+++ LG  G
Sbjct: 414 MVASGIKPNAVTFNVLMHGLFKDGKTDRAFSLFKEMLEKEEVPPTLVSYTILIDGLGKAG 473

Query: 550 YLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCN 609
            + EA   F EM  +  +P+   Y  L+    KAG + +A +  E M++ G+ P+V   +
Sbjct: 474 RVSEAFLQFQEMIDRGIIPECHTYTSLIYSLAKAGRIPEAKKLVEDMVKLGVNPDVQAYS 533

Query: 610 SLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLL 646
           +L++  +    +  A+ + Q M+  G  P+  TY +L
Sbjct: 534 ALITGLIDSSMVDTAWDVFQEMMKRGCAPNEVTYKVL 570



 Score =  120 bits (302), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 77/282 (27%), Positives = 135/282 (47%), Gaps = 5/282 (1%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           G   D   YT+++ +L    +      + D M+  GC P+ +TY  +I ++ +   +  A
Sbjct: 313 GCAPDVILYTSLIDLLFSTGRVPEARHVFDSMIEKGCAPDALTYGTIIQNFSKIGNVEAA 372

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
            ++ + M   G  PD   Y +L+D + K   +D A  +Y +M A+G+ P+  T++V+++ 
Sbjct: 373 GEILELMAKSGVGPDCFAYNSLMDGYVKLERVDQAFGVYDRMVASGIKPNAVTFNVLMHG 432

Query: 475 LGKAGHLQAAHQLFCEMVNQGCIP-NLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEP 533
           L K G    A  LF EM+ +  +P  LV+Y I+I    KA     A   +++M + G  P
Sbjct: 433 LFKDGKTDRAFSLFKEMLEKEEVPPTLVSYTILIDGLGKAGRVSEAFLQFQEMIDRGIIP 492

Query: 534 DKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWY 593
           +  TY+ ++  L   G + EA+ +  +M +    PD   Y  L+     +  V  AW+ +
Sbjct: 493 ECHTYTSLIYSLAKAGRIPEAKKLVEDMVKLGVNPDVQAYSALITGLIDSSMVDTAWDVF 552

Query: 594 EAMLQAGLRPNVPTCNSLLSAFLRVGQLSD----AYHLLQGM 631
           + M++ G  PN  T   L   F   G+  D      H  QG+
Sbjct: 553 QEMMKRGCAPNEVTYKVLRRGFRAAGRALDLEAVKQHFSQGV 594



 Score =  114 bits (284), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 70/225 (31%), Positives = 112/225 (49%), Gaps = 1/225 (0%)

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
           + G   D  TY T++    +     A  ++L+ M + G  P+   YN L+  Y +   ++
Sbjct: 346 EKGCAPDALTYGTIIQNFSKIGNVEAAGEILELMAKSGVGPDCFAYNSLMDGYVKLERVD 405

Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKM-QAAGLSPDTFTYSVI 471
           +A  V+ +M   G +P+ VT+  L+    K G  D A  ++K+M +   + P   +Y+++
Sbjct: 406 QAFGVYDRMVASGIKPNAVTFNVLMHGLFKDGKTDRAFSLFKEMLEKEEVPPTLVSYTIL 465

Query: 472 INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF 531
           I+ LGKAG +  A   F EM+++G IP   TY  +I   AKA     A KL  DM   G 
Sbjct: 466 IDGLGKAGRVSEAFLQFQEMIDRGIIPECHTYTSLIYSLAKAGRIPEAKKLVEDMVKLGV 525

Query: 532 EPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLL 576
            PD   YS ++  L     +D A  VF EM ++   P+E  Y +L
Sbjct: 526 NPDVQAYSALITGLIDSSMVDTAWDVFQEMMKRGCAPNEVTYKVL 570



 Score = 96.7 bits (239), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 99/425 (23%), Positives = 171/425 (40%), Gaps = 66/425 (15%)

Query: 424 VGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQA 483
           +GCEP  V+Y T+I   A    +D A   +  M   G  PD   ++ +I+   KAG  Q 
Sbjct: 1   MGCEPTIVSYNTVISGLASIDKMDEAYKFFNSMIDNGCEPDVIAFTTLIHGFCKAGQPQV 60

Query: 484 AHQL---------------------FCE----------MVNQGCIPNLVTYNIMIALQAK 512
            H+L                     +C+           V      ++++Y  +I   A 
Sbjct: 61  GHKLLNQALKRFRPDVFLYTSVIHGYCKAGDLDTGYFRAVTPKASLDVISYTTVIKGLAD 120

Query: 513 ARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPV 572
           ++    A +L+ +++ AG  P+ V Y+ V++ L   G +++    F EM   + VP    
Sbjct: 121 SKRIDEACELFEELKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEEMSGSSCVPTRTT 180

Query: 573 YGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGML 632
           Y +++D   KA  +  A + +E M+Q G  P+  T  +L+  F +  ++ +A  LL  ML
Sbjct: 181 YTVVIDGLCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSKASKMDEARKLLDVML 240

Query: 633 NLGLKPSLQTYTLLLSCCTEARSPYDMGFC--------HELMA---VSGHPAHMFLLSMP 681
             G +P+  TY  ++            GFC         E++A     G    +F+ +  
Sbjct: 241 TKGPEPTAVTYGSIVH-----------GFCKLDMINEAKEVIAQMRERGCEPGLFIFTSL 289

Query: 682 SPGPDGQNVRDHVGSFLEMMHSEDRESKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNV 741
                 +   +     L  M +        L  +++D L  +G   EA  V++   +K  
Sbjct: 290 LSYYLSKGRAEEAYQVLTEMTARGCAPDVILYTSLIDLLFSTGRVPEARHVFDSMIEKGC 349

Query: 742 YPDAVKEKGMSYWLINLHVMSDGTAVIALSRTLAWFRKQMLISGVGPSRI---DIVTGWG 798
            PDA     ++Y  I  +    G  V A    L    K    SGVGP       ++ G+ 
Sbjct: 350 APDA-----LTYGTIIQNFSKIGN-VEAAGEILELMAK----SGVGPDCFAYNSLMDGYV 399

Query: 799 RRSRV 803
           +  RV
Sbjct: 400 KLERV 404



 Score = 87.4 bits (215), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 60/216 (27%), Positives = 104/216 (48%), Gaps = 1/216 (0%)

Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLI 402
           A G    L  ++G   D   Y +++    +  +      + D+MV  G +PN VT+N L+
Sbjct: 371 AAGEILELMAKSGVGPDCFAYNSLMDGYVKLERVDQAFGVYDRMVASGIKPNAVTFNVLM 430

Query: 403 HSYGRANYLNEALDVFKQM-QVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGL 461
           H   +    + A  +FK+M +     P  V+Y  LID   KAG +  A   +++M   G+
Sbjct: 431 HGLFKDGKTDRAFSLFKEMLEKEEVPPTLVSYTILIDGLGKAGRVSEAFLQFQEMIDRGI 490

Query: 462 SPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALK 521
            P+  TY+ +I  L KAG +  A +L  +MV  G  P++  Y+ +I     +    +A  
Sbjct: 491 IPECHTYTSLIYSLAKAGRIPEAKKLVEDMVKLGVNPDVQAYSALITGLIDSSMVDTAWD 550

Query: 522 LYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAV 557
           ++++M   G  P++VTY ++       G   + EAV
Sbjct: 551 VFQEMMKRGCAPNEVTYKVLRRGFRAAGRALDLEAV 586



 Score = 79.3 bits (194), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 60/231 (25%), Positives = 112/231 (48%), Gaps = 9/231 (3%)

Query: 280 IPAGLAPFSRHFASTGNVVESVSRILRQWKWGPLAEEALGNTNYSMDAYQANQVLK---Q 336
           I  G AP +  +   G ++++ S+I      G + E  +  +    D +  N ++    +
Sbjct: 345 IEKGCAPDALTY---GTIIQNFSKIGNVEAAGEILE-LMAKSGVGPDCFAYNSLMDGYVK 400

Query: 337 LQDHTVALGFFNWLRRQAGFKHDEHTYTTMV-GILGRARQFGAINKLLDQMVRDGCQPNV 395
           L+    A G ++ +   +G K +  T+  ++ G+    +   A +   + + ++   P +
Sbjct: 401 LERVDQAFGVYDRMV-ASGIKPNAVTFNVLMHGLFKDGKTDRAFSLFKEMLEKEEVPPTL 459

Query: 396 VTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKK 455
           V+Y  LI   G+A  ++EA   F++M   G  P+  TY +LI   AKAG +  A  + + 
Sbjct: 460 VSYTILIDGLGKAGRVSEAFLQFQEMIDRGIIPECHTYTSLIYSLAKAGRIPEAKKLVED 519

Query: 456 MQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIM 506
           M   G++PD   YS +I  L  +  +  A  +F EM+ +GC PN VTY ++
Sbjct: 520 MVKLGVNPDVQAYSALITGLIDSSMVDTAWDVFQEMMKRGCAPNEVTYKVL 570


>gi|449469490|ref|XP_004152453.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74850,
           chloroplastic-like [Cucumis sativus]
          Length = 864

 Score =  165 bits (417), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 91/293 (31%), Positives = 159/293 (54%), Gaps = 1/293 (0%)

Query: 362 TYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEAL-DVFKQ 420
           +YT ++   GR  Q+    +LL++M R+   PN++TYN +I++  R +   E L  +F +
Sbjct: 185 SYTALINAYGRNGQYETSLELLERMKRERVSPNILTYNTVINACARGDLDWEGLLGLFAE 244

Query: 421 MQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGH 480
           M+  G +PD VTY TL+   A  G  D A  ++K M   G+ P+  TYS I+   GK G 
Sbjct: 245 MRHEGVQPDLVTYNTLLSACAARGLGDEAEMVFKTMIEGGIVPEITTYSYIVETFGKLGK 304

Query: 481 LQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSI 540
           L+    L  EM ++G +P++ +YN++I   AK  + + A+ +++ MQ AG  P+  TYSI
Sbjct: 305 LEKVAMLLKEMESEGYLPDISSYNVLIEAHAKLGSIKEAMDVFKQMQAAGCVPNASTYSI 364

Query: 541 VMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAG 600
           ++ + G  G  D+   +F +M+  +  PD   Y +L+ ++G+ G  ++    +  ++   
Sbjct: 365 LLNLYGKHGRYDDVRELFLQMKESSAEPDATTYNILIRVFGEGGYFKEVVTLFHDLVDEN 424

Query: 601 LRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEA 653
           + PN+ T   L+ A  + G   DA  +L  M   G+ PS + Y+ L+    +A
Sbjct: 425 IDPNMETYEGLVFACGKGGLHEDAKKILFHMNGKGIVPSSKAYSGLIEAYGQA 477



 Score =  149 bits (377), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 86/302 (28%), Positives = 152/302 (50%), Gaps = 3/302 (0%)

Query: 344 LGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFG-AINKLLDQMVRDGCQPNVVTYNRLI 402
           LG F  +R + G + D  TY T++     AR  G     +   M+  G  P + TY+ ++
Sbjct: 239 LGLFAEMRHE-GVQPDLVTYNTLLSACA-ARGLGDEAEMVFKTMIEGGIVPEITTYSYIV 296

Query: 403 HSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLS 462
            ++G+   L +   + K+M+  G  PD  +Y  LI+ HAK G +  AMD++K+MQAAG  
Sbjct: 297 ETFGKLGKLEKVAMLLKEMESEGYLPDISSYNVLIEAHAKLGSIKEAMDVFKQMQAAGCV 356

Query: 463 PDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKL 522
           P+  TYS+++N  GK G      +LF +M      P+  TYNI+I +  +   ++  + L
Sbjct: 357 PNASTYSILLNLYGKHGRYDDVRELFLQMKESSAEPDATTYNILIRVFGEGGYFKEVVTL 416

Query: 523 YRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGK 582
           + D+ +   +P+  TY  ++   G  G  ++A+ +   M  K  VP    Y  L++ +G+
Sbjct: 417 FHDLVDENIDPNMETYEGLVFACGKGGLHEDAKKILFHMNGKGIVPSSKAYSGLIEAYGQ 476

Query: 583 AGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQT 642
           A    +A   +  M + G +  + T NSL+  F R G   +   +L  M   G+  + ++
Sbjct: 477 AALYDEALVAFNTMNEVGSKSTIDTYNSLIHTFARGGLYKEFEAILSRMREYGISRNAKS 536

Query: 643 YT 644
           ++
Sbjct: 537 FS 538



 Score =  142 bits (359), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 118/517 (22%), Positives = 219/517 (42%), Gaps = 50/517 (9%)

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
           + G   +  TY+ +V   G+  +   +  LL +M  +G  P++ +YN LI ++ +   + 
Sbjct: 282 EGGIVPEITTYSYIVETFGKLGKLEKVAMLLKEMESEGYLPDISSYNVLIEAHAKLGSIK 341

Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
           EA+DVFKQMQ  GC P+  TY  L++++ K G  D   +++ +M+ +   PD  TY+++I
Sbjct: 342 EAMDVFKQMQAAGCVPNASTYSILLNLYGKHGRYDDVRELFLQMKESSAEPDATTYNILI 401

Query: 473 NCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFE 532
              G+ G+ +    LF ++V++   PN+ TY  ++    K   ++ A K+   M   G  
Sbjct: 402 RVFGEGGYFKEVVTLFHDLVDENIDPNMETYEGLVFACGKGGLHEDAKKILFHMNGKGIV 461

Query: 533 PDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEW 592
           P    YS ++E  G     DEA   F  M           Y  L+  + + G  ++    
Sbjct: 462 PSSKAYSGLIEAYGQAALYDEALVAFNTMNEVGSKSTIDTYNSLIHTFARGGLYKEFEAI 521

Query: 593 YEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAY---------------HLLQGMLNL--- 634
              M + G+  N  + + ++  + + GQ  +A                  L+G+L +   
Sbjct: 522 LSRMREYGISRNAKSFSGIIEGYRQSGQYEEAIKAFVEMEKMRCELDEQTLEGVLGVYCF 581

Query: 635 -----------------GLKPSLQTYTLLLSCCTE-ARSPYDMGFCHELMAVSGHPAHMF 676
                            G+ PS+  Y ++L+   +  R         E++       H  
Sbjct: 582 AGLVDESKEQFIEIKASGILPSVLCYCMMLAVYAKNGRWDDASELLDEMIKTRVSSIHQV 641

Query: 677 LLSMPSPGPDGQNVRDHVGSFLEMMHSEDRESKRGLVDAVVDFLHKSGLKEEAGSVWEVA 736
           +  M     D  +    V    + +++E         + +++ L   G K  A  V   A
Sbjct: 642 IGQMIKGDYDDDSNWQMVEYVFDKLNAEGCGFGMRFYNTLLEALWWLGQKGRAARVLTEA 701

Query: 737 AQKNVYPDAVKEKGMSYWLINLHVMSDGTAVIALSRTLAWFRK--QMLISGVG-PSRIDI 793
            ++ ++P+  ++  +  W +++H M +G A  A+S    W  K  +ML+ G   P    +
Sbjct: 702 TKRGLFPELFRQSKL-VWSVDVHRMWEGGAYTAVS---LWVNKMNEMLMDGEDLPQLAAV 757

Query: 794 VTGWGRRSR-VTGTSL-VRQAVQELLH-----MFSFP 823
           V G G   +  T  +L + +AV   L       FSFP
Sbjct: 758 VVGRGSLEKDSTARNLPIARAVYSFLQDNVSSSFSFP 794



 Score = 87.4 bits (215), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 54/247 (21%), Positives = 108/247 (43%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           +++  + D  TY  ++ + G    F  +  L   +V +   PN+ TY  L+ + G+    
Sbjct: 386 KESSAEPDATTYNILIRVFGEGGYFKEVVTLFHDLVDENIDPNMETYEGLVFACGKGGLH 445

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
            +A  +   M   G  P    Y  LI+ + +A   D A+  +  M   G      TY+ +
Sbjct: 446 EDAKKILFHMNGKGIVPSSKAYSGLIEAYGQAALYDEALVAFNTMNEVGSKSTIDTYNSL 505

Query: 472 INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF 531
           I+   + G  +    +   M   G   N  +++ +I    ++  Y+ A+K + +M+    
Sbjct: 506 IHTFARGGLYKEFEAILSRMREYGISRNAKSFSGIIEGYRQSGQYEEAIKAFVEMEKMRC 565

Query: 532 EPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWE 591
           E D+ T   V+ V    G +DE++  F E++    +P    Y +++ ++ K G    A E
Sbjct: 566 ELDEQTLEGVLGVYCFAGLVDESKEQFIEIKASGILPSVLCYCMMLAVYAKNGRWDDASE 625

Query: 592 WYEAMLQ 598
             + M++
Sbjct: 626 LLDEMIK 632


>gi|449487793|ref|XP_004157803.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74850,
           chloroplastic-like [Cucumis sativus]
          Length = 864

 Score =  165 bits (417), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 91/293 (31%), Positives = 159/293 (54%), Gaps = 1/293 (0%)

Query: 362 TYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEAL-DVFKQ 420
           +YT ++   GR  Q+    +LL++M R+   PN++TYN +I++  R +   E L  +F +
Sbjct: 185 SYTALINAYGRNGQYETSLELLERMKRERVSPNILTYNTVINACARGDLDWEGLLGLFAE 244

Query: 421 MQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGH 480
           M+  G +PD VTY TL+   A  G  D A  ++K M   G+ P+  TYS I+   GK G 
Sbjct: 245 MRHEGVQPDLVTYNTLLSACAARGLGDEAEMVFKTMIEGGIVPEITTYSYIVETFGKLGK 304

Query: 481 LQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSI 540
           L+    L  EM ++G +P++ +YN++I   AK  + + A+ +++ MQ AG  P+  TYSI
Sbjct: 305 LEKVAMLLKEMESEGYLPDISSYNVLIEAHAKLGSIKEAMDVFKQMQAAGCVPNASTYSI 364

Query: 541 VMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAG 600
           ++ + G  G  D+   +F +M+  +  PD   Y +L+ ++G+ G  ++    +  ++   
Sbjct: 365 LLNLYGKHGRYDDVRELFLQMKESSAEPDATTYNILIRVFGEGGYFKEVVTLFHDLVDEN 424

Query: 601 LRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEA 653
           + PN+ T   L+ A  + G   DA  +L  M   G+ PS + Y+ L+    +A
Sbjct: 425 IDPNMETYEGLVFACGKGGLHEDAKKILFHMNGKGIVPSSKAYSGLIEAYGQA 477



 Score =  149 bits (377), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 86/302 (28%), Positives = 152/302 (50%), Gaps = 3/302 (0%)

Query: 344 LGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFG-AINKLLDQMVRDGCQPNVVTYNRLI 402
           LG F  +R + G + D  TY T++     AR  G     +   M+  G  P + TY+ ++
Sbjct: 239 LGLFAEMRHE-GVQPDLVTYNTLLSACA-ARGLGDEAEMVFKTMIEGGIVPEITTYSYIV 296

Query: 403 HSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLS 462
            ++G+   L +   + K+M+  G  PD  +Y  LI+ HAK G +  AMD++K+MQAAG  
Sbjct: 297 ETFGKLGKLEKVAMLLKEMESEGYLPDISSYNVLIEAHAKLGSIKEAMDVFKQMQAAGCV 356

Query: 463 PDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKL 522
           P+  TYS+++N  GK G      +LF +M      P+  TYNI+I +  +   ++  + L
Sbjct: 357 PNASTYSILLNLYGKHGRYDDVRELFLQMKESSAEPDATTYNILIRVFGEGGYFKEVVTL 416

Query: 523 YRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGK 582
           + D+ +   +P+  TY  ++   G  G  ++A+ +   M  K  VP    Y  L++ +G+
Sbjct: 417 FHDLVDENIDPNMETYEGLVFACGKGGLHEDAKKILFHMNGKGIVPSSKAYSGLIEAYGQ 476

Query: 583 AGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQT 642
           A    +A   +  M + G +  + T NSL+  F R G   +   +L  M   G+  + ++
Sbjct: 477 AALYDEALVAFNTMNEVGSKSTIDTYNSLIHTFARGGLYKEFEAILSRMREYGISRNAKS 536

Query: 643 YT 644
           ++
Sbjct: 537 FS 538



 Score =  142 bits (359), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 118/517 (22%), Positives = 219/517 (42%), Gaps = 50/517 (9%)

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
           + G   +  TY+ +V   G+  +   +  LL +M  +G  P++ +YN LI ++ +   + 
Sbjct: 282 EGGIVPEITTYSYIVETFGKLGKLEKVAMLLKEMESEGYLPDISSYNVLIEAHAKLGSIK 341

Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
           EA+DVFKQMQ  GC P+  TY  L++++ K G  D   +++ +M+ +   PD  TY+++I
Sbjct: 342 EAMDVFKQMQAAGCVPNASTYSILLNLYGKHGRYDDVRELFLQMKESSAEPDATTYNILI 401

Query: 473 NCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFE 532
              G+ G+ +    LF ++V++   PN+ TY  ++    K   ++ A K+   M   G  
Sbjct: 402 RVFGEGGYFKEVVTLFHDLVDENIDPNMETYEGLVFACGKGGLHEDAKKILFHMNGKGIV 461

Query: 533 PDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEW 592
           P    YS ++E  G     DEA   F  M           Y  L+  + + G  ++    
Sbjct: 462 PSSKAYSGLIEAYGQAALYDEALVAFNTMNEVGSKSTIDTYNSLIHTFARGGLYKEFEAI 521

Query: 593 YEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAY---------------HLLQGMLNL--- 634
              M + G+  N  + + ++  + + GQ  +A                  L+G+L +   
Sbjct: 522 LSRMREYGISRNAKSFSGIIEGYRQSGQYEEAIKAFVEMEKMRCELDEQTLEGVLGVYCF 581

Query: 635 -----------------GLKPSLQTYTLLLSCCTE-ARSPYDMGFCHELMAVSGHPAHMF 676
                            G+ PS+  Y ++L+   +  R         E++       H  
Sbjct: 582 AGLVDESKEQFIEIKASGILPSVLCYCMMLAVYAKNGRWDDASELLDEMIKTRVSSIHQV 641

Query: 677 LLSMPSPGPDGQNVRDHVGSFLEMMHSEDRESKRGLVDAVVDFLHKSGLKEEAGSVWEVA 736
           +  M     D  +    V    + +++E         + +++ L   G K  A  V   A
Sbjct: 642 IGQMIKGDYDDDSNWQMVEYVFDKLNAEGCGFGMRFYNTLLEALWWLGQKGRAARVLTEA 701

Query: 737 AQKNVYPDAVKEKGMSYWLINLHVMSDGTAVIALSRTLAWFRK--QMLISGVG-PSRIDI 793
            ++ ++P+  ++  +  W +++H M +G A  A+S    W  K  +ML+ G   P    +
Sbjct: 702 TKRGLFPELFRQSKL-VWSVDVHRMWEGGAYTAVS---LWVNKMNEMLMDGEDLPQLAAV 757

Query: 794 VTGWGRRSR-VTGTSL-VRQAVQELLH-----MFSFP 823
           V G G   +  T  +L + +AV   L       FSFP
Sbjct: 758 VVGRGSLEKDSTARNLPIARAVYSFLQDNVSSSFSFP 794



 Score = 87.4 bits (215), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 54/247 (21%), Positives = 108/247 (43%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           +++  + D  TY  ++ + G    F  +  L   +V +   PN+ TY  L+ + G+    
Sbjct: 386 KESSAEPDATTYNILIRVFGEGGYFKEVVTLFHDLVDENIDPNMETYEGLVFACGKGGLH 445

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
            +A  +   M   G  P    Y  LI+ + +A   D A+  +  M   G      TY+ +
Sbjct: 446 EDAKKILFHMNGKGIVPSSKAYSGLIEAYGQAALYDEALVAFNTMNEVGSKSTIDTYNSL 505

Query: 472 INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF 531
           I+   + G  +    +   M   G   N  +++ +I    ++  Y+ A+K + +M+    
Sbjct: 506 IHTFARGGLYKEFEAILSRMREYGISRNAKSFSGIIEGYRQSGQYEEAIKAFVEMEKMRC 565

Query: 532 EPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWE 591
           E D+ T   V+ V    G +DE++  F E++    +P    Y +++ ++ K G    A E
Sbjct: 566 ELDEQTLEGVLGVYCFAGLVDESKEQFIEIKASGILPSVLCYCMMLAVYAKNGRWDDASE 625

Query: 592 WYEAMLQ 598
             + M++
Sbjct: 626 LLDEMIK 632


>gi|297849642|ref|XP_002892702.1| hypothetical protein ARALYDRAFT_471420 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297338544|gb|EFH68961.1| hypothetical protein ARALYDRAFT_471420 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 667

 Score =  165 bits (417), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 92/297 (30%), Positives = 160/297 (53%), Gaps = 4/297 (1%)

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
           + G++ D  T+ T++  L    +      L+ +MV +GCQPNVVTYN +++   ++   +
Sbjct: 128 KLGYEPDTTTFNTLINGLCLESKVSEAVVLVARMVENGCQPNVVTYNSIVNGICKSGDTS 187

Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
            ALD+ ++M     + D  TY T+ID   + G +D A+ ++K+M+  G+     TY+ ++
Sbjct: 188 LALDLLRKMDERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSLVTYNSLV 247

Query: 473 NCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFE 532
             L KAG      QL  +M ++  IPN++T+N++I +  K    Q A +LY++M   G  
Sbjct: 248 GGLCKAGKWNDGVQLLKDMTSRKIIPNVITFNVLIDVFVKEGKLQEANELYKEMITKGIS 307

Query: 533 PDKVTYSIVMEVLGHC--GYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAW 590
           P+ +TY+ +M+  G+C    L EA  +   M R N  PD   +  L+  + K   V +  
Sbjct: 308 PNTITYNSLMD--GYCMQNRLSEANNMLDLMVRNNCSPDIVTFTSLIKGYCKVKRVDEGM 365

Query: 591 EWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
           + +  + + GL  N  T + L+  F + G+L  A  L Q M++LG+ P + TY +LL
Sbjct: 366 KLFRKISKRGLVANTVTYSILVQGFCQSGKLEIAEELFQEMVSLGVLPDVMTYGILL 422



 Score =  155 bits (391), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 89/310 (28%), Positives = 159/310 (51%), Gaps = 1/310 (0%)

Query: 339 DHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTY 398
           D ++AL     +  +   K D  TY+T++  L R     A   L  +M   G + ++VTY
Sbjct: 185 DTSLALDLLRKMDER-NVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSLVTY 243

Query: 399 NRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQA 458
           N L+    +A   N+ + + K M      P+ +T+  LID+  K G L  A ++YK+M  
Sbjct: 244 NSLVGGLCKAGKWNDGVQLLKDMTSRKIIPNVITFNVLIDVFVKEGKLQEANELYKEMIT 303

Query: 459 AGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQS 518
            G+SP+T TY+ +++       L  A+ +   MV   C P++VT+  +I    K +    
Sbjct: 304 KGISPNTITYNSLMDGYCMQNRLSEANNMLDLMVRNNCSPDIVTFTSLIKGYCKVKRVDE 363

Query: 519 ALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVD 578
            +KL+R +   G   + VTYSI+++     G L+ AE +F EM     +PD   YG+L+D
Sbjct: 364 GMKLFRKISKRGLVANTVTYSILVQGFCQSGKLEIAEELFQEMVSLGVLPDVMTYGILLD 423

Query: 579 LWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKP 638
                G + KA E +E + ++ +  ++     ++    + G++ DA++L   +   G+KP
Sbjct: 424 GLCDNGKLEKALEIFEDLQKSKMNLDIVMYTIIIEGMCKGGKVEDAWNLFCSLPCKGVKP 483

Query: 639 SLQTYTLLLS 648
           ++ TYT+++S
Sbjct: 484 NVMTYTVMIS 493



 Score =  147 bits (372), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 80/286 (27%), Positives = 151/286 (52%)

Query: 362 TYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQM 421
           T+  ++ +  +  +    N+L  +M+  G  PN +TYN L+  Y   N L+EA ++   M
Sbjct: 277 TFNVLIDVFVKEGKLQEANELYKEMITKGISPNTITYNSLMDGYCMQNRLSEANNMLDLM 336

Query: 422 QVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHL 481
               C PD VT+ +LI  + K   +D  M +++K+   GL  +T TYS+++    ++G L
Sbjct: 337 VRNNCSPDIVTFTSLIKGYCKVKRVDEGMKLFRKISKRGLVANTVTYSILVQGFCQSGKL 396

Query: 482 QAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIV 541
           + A +LF EMV+ G +P+++TY I++         + AL+++ D+Q +    D V Y+I+
Sbjct: 397 EIAEELFQEMVSLGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMNLDIVMYTII 456

Query: 542 MEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGL 601
           +E +   G +++A  +F  +  K   P+   Y +++    K G++ +A      M + G 
Sbjct: 457 IEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGN 516

Query: 602 RPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
            PN  T N+L+ A LR G L+ +  L++ M + G      +  +++
Sbjct: 517 EPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVI 562



 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 92/329 (27%), Positives = 170/329 (51%), Gaps = 4/329 (1%)

Query: 322 NYSMDAYQANQVLKQL-QDHTV--ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGA 378
           N   D +  + ++  L +D  +  A+  F  +  + G K    TY ++VG L +A ++  
Sbjct: 200 NVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETK-GIKSSLVTYNSLVGGLCKAGKWND 258

Query: 379 INKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLID 438
             +LL  M      PNV+T+N LI  + +   L EA +++K+M   G  P+ +TY +L+D
Sbjct: 259 GVQLLKDMTSRKIIPNVITFNVLIDVFVKEGKLQEANELYKEMITKGISPNTITYNSLMD 318

Query: 439 IHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIP 498
            +     L  A +M   M     SPD  T++ +I    K   +    +LF ++  +G + 
Sbjct: 319 GYCMQNRLSEANNMLDLMVRNNCSPDIVTFTSLIKGYCKVKRVDEGMKLFRKISKRGLVA 378

Query: 499 NLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVF 558
           N VTY+I++    ++   + A +L+++M + G  PD +TY I+++ L   G L++A  +F
Sbjct: 379 NTVTYSILVQGFCQSGKLEIAEELFQEMVSLGVLPDVMTYGILLDGLCDNGKLEKALEIF 438

Query: 559 AEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRV 618
            ++++     D  +Y ++++   K G V  AW  + ++   G++PNV T   ++S   + 
Sbjct: 439 EDLQKSKMNLDIVMYTIIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKK 498

Query: 619 GQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
           G LS+A  LL+ M   G +P+  TY  L+
Sbjct: 499 GSLSEANILLRKMEEDGNEPNDCTYNTLI 527



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 98/377 (25%), Positives = 161/377 (42%), Gaps = 24/377 (6%)

Query: 382 LLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHA 441
           L  +M+R    P++V ++R           N  LD  K+M++ G   +  T   +I+   
Sbjct: 52  LFQEMIRSRPLPSLVDFSRFFSGVASTKQFNLVLDFCKKMELNGIAHNIYTLNIMINCFC 111

Query: 442 KAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLV 501
           +      A  +  K+   G  PDT T++ +IN L     +  A  L   MV  GC PN+V
Sbjct: 112 RCCKTCFAYSVLGKVMKLGYEPDTTTFNTLINGLCLESKVSEAVVLVARMVENGCQPNVV 171

Query: 502 TYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEM 561
           TYN ++    K+ +   AL L R M     + D  TYS +++ L   G +D A ++F EM
Sbjct: 172 TYNSIVNGICKSGDTSLALDLLRKMDERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEM 231

Query: 562 RRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQL 621
             K        Y  LV    KAG      +  + M    + PNV T N L+  F++ G+L
Sbjct: 232 ETKGIKSSLVTYNSLVGGLCKAGKWNDGVQLLKDMTSRKIIPNVITFNVLIDVFVKEGKL 291

Query: 622 SDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGFCHELMAVSGHPAHMFLLSMP 681
            +A  L + M+  G+ P+  TY  L+            G+C +   +S     + L+   
Sbjct: 292 QEANELYKEMITKGISPNTITYNSLMD-----------GYCMQ-NRLSEANNMLDLMVRN 339

Query: 682 SPGPDGQNVRDHVGSFLEMMHSED------RESKRGLVDAVVDF------LHKSGLKEEA 729
           +  PD       +  + ++   ++      + SKRGLV   V +        +SG  E A
Sbjct: 340 NCSPDIVTFTSLIKGYCKVKRVDEGMKLFRKISKRGLVANTVTYSILVQGFCQSGKLEIA 399

Query: 730 GSVWEVAAQKNVYPDAV 746
             +++      V PD +
Sbjct: 400 EELFQEMVSLGVLPDVM 416



 Score =  114 bits (284), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 61/247 (24%), Positives = 124/247 (50%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           G   +  TY +++       +    N +LD MVR+ C P++VT+  LI  Y +   ++E 
Sbjct: 305 GISPNTITYNSLMDGYCMQNRLSEANNMLDLMVRNNCSPDIVTFTSLIKGYCKVKRVDEG 364

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
           + +F+++   G   + VTY  L+    ++G L++A +++++M + G+ PD  TY ++++ 
Sbjct: 365 MKLFRKISKRGLVANTVTYSILVQGFCQSGKLEIAEELFQEMVSLGVLPDVMTYGILLDG 424

Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPD 534
           L   G L+ A ++F ++       ++V Y I+I    K    + A  L+  +   G +P+
Sbjct: 425 LCDNGKLEKALEIFEDLQKSKMNLDIVMYTIIIEGMCKGGKVEDAWNLFCSLPCKGVKPN 484

Query: 535 KVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYE 594
            +TY++++  L   G L EA  +  +M      P++  Y  L+    + G++  + +  E
Sbjct: 485 VMTYTVMISGLCKKGSLSEANILLRKMEEDGNEPNDCTYNTLIRAHLRDGDLTASAKLIE 544

Query: 595 AMLQAGL 601
            M   G 
Sbjct: 545 EMKSCGF 551



 Score = 63.5 bits (153), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 53/236 (22%), Positives = 101/236 (42%), Gaps = 35/236 (14%)

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
           ++A+D+F++M      P  V +       A     ++ +D  KKM+  G++ + +T +++
Sbjct: 47  DDAIDLFQEMIRSRPLPSLVDFSRFFSGVASTKQFNLVLDFCKKMELNGIAHNIYTLNIM 106

Query: 472 INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF 531
           INC             FC      C      Y+++             +KL       G+
Sbjct: 107 INC-------------FCR-----CCKTCFAYSVL----------GKVMKL-------GY 131

Query: 532 EPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWE 591
           EPD  T++ ++  L     + EA  + A M      P+   Y  +V+   K+G+   A +
Sbjct: 132 EPDTTTFNTLINGLCLESKVSEAVVLVARMVENGCQPNVVTYNSIVNGICKSGDTSLALD 191

Query: 592 WYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
               M +  ++ +V T ++++ +  R G +  A  L + M   G+K SL TY  L+
Sbjct: 192 LLRKMDERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSLVTYNSLV 247



 Score = 46.6 bits (109), Expect = 0.064,   Method: Compositional matrix adjust.
 Identities = 28/89 (31%), Positives = 44/89 (49%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           G K +  TYT M+  L +       N LL +M  DG +PN  TYN LI ++ R   L  +
Sbjct: 480 GVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNEPNDCTYNTLIRAHLRDGDLTAS 539

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKA 443
             + ++M+  G   D  +   +ID+ + A
Sbjct: 540 AKLIEEMKSCGFSADASSIKMVIDMLSSA 568


>gi|449484944|ref|XP_004157025.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At3g16010-like [Cucumis sativus]
          Length = 637

 Score =  165 bits (417), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 113/401 (28%), Positives = 190/401 (47%), Gaps = 7/401 (1%)

Query: 254 SNLQPSDAKVVECVSE-----RFSKPSREMKIPAGLAPFSRHFASTGNVVESVSRILRQW 308
           S+L P   ++ +  +E     R S PS E    +      R   S   + E   RIL+ +
Sbjct: 13  SSLHPLSTRIKQTENEIVQMFRVSTPSPEASNFSFNRKVLRRDPSVRTLDERFIRILKIF 72

Query: 309 KWGPLAEEALGNTNYSMDAYQANQVLKQLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVG 368
           KWG  AE+A+      +D    +QVL    +    + FF W  ++  F+HD  TY  ++ 
Sbjct: 73  KWGSDAEKAIEVLKLKVDHRLVHQVLDIDVEIRAKIQFFKWAGKRQHFQHDSTTYMALIR 132

Query: 369 ILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEP 428
            L  +     + + +  M+R  C      ++ ++   G+A  +N+AL VF Q++   C P
Sbjct: 133 CLEESGLVDEMWRTIQDMIRSPCSVGPAEWSEILKILGKAKMVNKALSVFYQIKGRKCNP 192

Query: 429 DRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAG-LSPDTFTYSVIINCLGKAGHLQAAHQL 487
               Y TLI +    G  +   ++Y ++ + G  SPDT TYS +I+  GK      A +L
Sbjct: 193 TATVYNTLILMLMHEGHHEKIHELYNEICSEGNCSPDTITYSALISAFGKLERYDFAFRL 252

Query: 488 FCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGH 547
           F EM   G  P    Y  ++A+  K    ++AL+L  +M+  G  P   TY+ +++ LG 
Sbjct: 253 FDEMKENGLHPTEKIYTTILAMYFKLNKVEAALRLVEEMKGKGCAPTVFTYTELIKGLGK 312

Query: 548 CGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPT 607
            G +D+A ++F  M +    PD  +   L+++ G+AG +  A + +  M      PNV T
Sbjct: 313 VGRVDDAYSLFFNMLKDGCKPDVVLINNLINILGRAGRLEDALKLFGKMDSLQCAPNVVT 372

Query: 608 CNSLLSA-FLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
            N+++ A F      S+A    + M   G+ PS  TY +L+
Sbjct: 373 YNTVIKAIFESKAPASEAALWFEKMKANGIAPSSFTYAILI 413



 Score =  144 bits (362), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 88/295 (29%), Positives = 156/295 (52%), Gaps = 5/295 (1%)

Query: 362 TYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQM 421
           TYT ++  LG+  +      L   M++DGC+P+VV  N LI+  GRA  L +AL +F +M
Sbjct: 302 TYTELIKGLGKVGRVDDAYSLFFNMLKDGCKPDVVLINNLINILGRAGRLEDALKLFGKM 361

Query: 422 QVVGCEPDRVTYCTLID--IHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAG 479
             + C P+ VTY T+I     +KA   + A+  ++KM+A G++P +FTY+++I+   K  
Sbjct: 362 DSLQCAPNVVTYNTVIKAIFESKAPASEAAL-WFEKMKANGIAPSSFTYAILIDGFCKTN 420

Query: 480 HLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDM-QNAGFEPDKVTY 538
            ++ A  L  EM  +G  P    Y  +I    +A+ Y++A +L++++ +N G    +V Y
Sbjct: 421 RVEKALLLLEEMDEKGFPPCPAAYCSLIDSLGRAKRYEAANELFQELKENCGRSSARV-Y 479

Query: 539 SIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQ 598
           +++++  G+CG L +A  +F E  +    PD   Y  L+    +AG + +A      M +
Sbjct: 480 AVMIKHFGNCGRLSDAVDLFCEXEKLGCSPDVYTYNALMSGMIRAGMIDEAHSLMRNMRE 539

Query: 599 AGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEA 653
            G  P++ + N +L+   + G    A  +   M    + P   +Y  +LSC + A
Sbjct: 540 NGCTPDIKSHNIILNGLAKTGGPKRAIEMFTKMKESEIMPDAVSYNTILSCLSRA 594



 Score =  139 bits (351), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 87/305 (28%), Positives = 146/305 (47%), Gaps = 3/305 (0%)

Query: 346 FFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSY 405
            +N +  +     D  TY+ ++   G+  ++    +L D+M  +G  P    Y  ++  Y
Sbjct: 216 LYNEICSEGNCSPDTITYSALISAFGKLERYDFAFRLFDEMKENGLHPTEKIYTTILAMY 275

Query: 406 GRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDT 465
            + N +  AL + ++M+  GC P   TY  LI    K G +D A  ++  M   G  PD 
Sbjct: 276 FKLNKVEAALRLVEEMKGKGCAPTVFTYTELIKGLGKVGRVDDAYSLFFNMLKDGCKPDV 335

Query: 466 FTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIA--LQAKARNYQSALKLY 523
              + +IN LG+AG L+ A +LF +M +  C PN+VTYN +I    ++KA   ++AL  +
Sbjct: 336 VLINNLINILGRAGRLEDALKLFGKMDSLQCAPNVVTYNTVIKAIFESKAPASEAAL-WF 394

Query: 524 RDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKA 583
             M+  G  P   TY+I+++       +++A  +  EM  K + P    Y  L+D  G+A
Sbjct: 395 EKMKANGIAPSSFTYAILIDGFCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLIDSLGRA 454

Query: 584 GNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTY 643
                A E ++ + +   R +      ++  F   G+LSDA  L      LG  P + TY
Sbjct: 455 KRYEAANELFQELKENCGRSSARVYAVMIKHFGNCGRLSDAVDLFCEXEKLGCSPDVYTY 514

Query: 644 TLLLS 648
             L+S
Sbjct: 515 NALMS 519



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 78/288 (27%), Positives = 142/288 (49%), Gaps = 2/288 (0%)

Query: 362 TYTTMVGILGRARQFGAINKLLDQMVRDG-CQPNVVTYNRLIHSYGRANYLNEALDVFKQ 420
            Y T++ +L        I++L +++  +G C P+ +TY+ LI ++G+    + A  +F +
Sbjct: 196 VYNTLILMLMHEGHHEKIHELYNEICSEGNCSPDTITYSALISAFGKLERYDFAFRLFDE 255

Query: 421 MQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGH 480
           M+  G  P    Y T++ ++ K   ++ A+ + ++M+  G +P  FTY+ +I  LGK G 
Sbjct: 256 MKENGLHPTEKIYTTILAMYFKLNKVEAALRLVEEMKGKGCAPTVFTYTELIKGLGKVGR 315

Query: 481 LQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSI 540
           +  A+ LF  M+  GC P++V  N +I +  +A   + ALKL+  M +    P+ VTY+ 
Sbjct: 316 VDDAYSLFFNMLKDGCKPDVVLINNLINILGRAGRLEDALKLFGKMDSLQCAPNVVTYNT 375

Query: 541 VMEVLGHC-GYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQA 599
           V++ +        EA   F +M+     P    Y +L+D + K   V KA    E M + 
Sbjct: 376 VIKAIFESKAPASEAALWFEKMKANGIAPSSFTYAILIDGFCKTNRVEKALLLLEEMDEK 435

Query: 600 GLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
           G  P      SL+ +  R  +   A  L Q +     + S + Y +++
Sbjct: 436 GFPPCPAAYCSLIDSLGRAKRYEAANELFQELKENCGRSSARVYAVMI 483



 Score =  129 bits (324), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 87/303 (28%), Positives = 144/303 (47%), Gaps = 3/303 (0%)

Query: 346 FFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSY 405
           FFN L+   G K D      ++ ILGRA +     KL  +M    C PNVVTYN +I + 
Sbjct: 323 FFNMLKD--GCKPDVVLINNLINILGRAGRLEDALKLFGKMDSLQCAPNVVTYNTVIKAI 380

Query: 406 GRANY-LNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPD 464
             +    +EA   F++M+  G  P   TY  LID   K   ++ A+ + ++M   G  P 
Sbjct: 381 FESKAPASEAALWFEKMKANGIAPSSFTYAILIDGFCKTNRVEKALLLLEEMDEKGFPPC 440

Query: 465 TFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYR 524
              Y  +I+ LG+A   +AA++LF E+       +   Y +MI           A+ L+ 
Sbjct: 441 PAAYCSLIDSLGRAKRYEAANELFQELKENCGRSSARVYAVMIKHFGNCGRLSDAVDLFC 500

Query: 525 DMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAG 584
           + +  G  PD  TY+ +M  +   G +DEA ++   MR     PD   + ++++   K G
Sbjct: 501 EXEKLGCSPDVYTYNALMSGMIRAGMIDEAHSLMRNMRENGCTPDIKSHNIILNGLAKTG 560

Query: 585 NVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYT 644
             ++A E +  M ++ + P+  + N++LS   R G    A  L++ M   G +    TY+
Sbjct: 561 GPKRAIEMFTKMKESEIMPDAVSYNTILSCLSRAGMFEMAAKLMREMKLKGFEYDSITYS 620

Query: 645 LLL 647
            +L
Sbjct: 621 SIL 623



 Score =  121 bits (303), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 59/194 (30%), Positives = 113/194 (58%)

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
           + GF      Y +++  LGRA+++ A N+L  ++  +  + +   Y  +I  +G    L+
Sbjct: 434 EKGFPPCPAAYCSLIDSLGRAKRYEAANELFQELKENCGRSSARVYAVMIKHFGNCGRLS 493

Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
           +A+D+F + + +GC PD  TY  L+    +AG +D A  + + M+  G +PD  ++++I+
Sbjct: 494 DAVDLFCEXEKLGCSPDVYTYNALMSGMIRAGMIDEAHSLMRNMRENGCTPDIKSHNIIL 553

Query: 473 NCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFE 532
           N L K G  + A ++F +M     +P+ V+YN +++  ++A  ++ A KL R+M+  GFE
Sbjct: 554 NGLAKTGGPKRAIEMFTKMKESEIMPDAVSYNTILSCLSRAGMFEMAAKLMREMKLKGFE 613

Query: 533 PDKVTYSIVMEVLG 546
            D +TYS ++E +G
Sbjct: 614 YDSITYSSILEAVG 627



 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 32/125 (25%), Positives = 67/125 (53%)

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
           + G   D +TY  ++  + RA      + L+  M  +GC P++ ++N +++   +     
Sbjct: 504 KLGCSPDVYTYNALMSGMIRAGMIDEAHSLMRNMRENGCTPDIKSHNIILNGLAKTGGPK 563

Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
            A+++F +M+     PD V+Y T++   ++AG  ++A  + ++M+  G   D+ TYS I+
Sbjct: 564 RAIEMFTKMKESEIMPDAVSYNTILSCLSRAGMFEMAAKLMREMKLKGFEYDSITYSSIL 623

Query: 473 NCLGK 477
             +GK
Sbjct: 624 EAVGK 628


>gi|302808965|ref|XP_002986176.1| hypothetical protein SELMODRAFT_182249 [Selaginella moellendorffii]
 gi|300146035|gb|EFJ12707.1| hypothetical protein SELMODRAFT_182249 [Selaginella moellendorffii]
          Length = 609

 Score =  165 bits (417), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 107/396 (27%), Positives = 192/396 (48%), Gaps = 37/396 (9%)

Query: 316 EALGNTNYSMDAYQANQVLKQLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQ 375
           E + +  ++ DA+    ++  + +     G  + LR   G   +  TYT ++    RA++
Sbjct: 136 EEMKSAGFAPDAFTHTPIITAMANAGDLDGAMDHLRSM-GCDPNVVTYTALIAAFARAKK 194

Query: 376 FGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCT 435
                KLL++M   GC PN+VTYN L+ +  + + +  A DV K+M   G  P+ +T+ +
Sbjct: 195 LEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKKMIEGGFAPNVMTFNS 254

Query: 436 LIDIHAKAGFLD-----------------------------------VAMDMYKKMQAAG 460
           L+D   K G +D                                    A ++ ++M+  G
Sbjct: 255 LVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFLEAKEVLEEMKTRG 314

Query: 461 LSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSAL 520
           ++PD FTYS +I+ L KA  ++ A Q+   M   GC P++V Y+ +I    K+     A 
Sbjct: 315 VTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSSIIHAFCKSGKLLEAQ 374

Query: 521 KLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRK-NWVPDEPVYGLLVDL 579
           K  ++M+     PD VTY+ V++ L   G + EA+ +  +M+   + +PD   Y  +++ 
Sbjct: 375 KTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILEQMQESGDVLPDVVTYSTVING 434

Query: 580 WGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPS 639
             K+  + +A +  + M +AG  P+V T  +++    + G+L +A +LLQGM   G  P+
Sbjct: 435 LCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCKCGRLEEAEYLLQGMKRAGCAPN 494

Query: 640 LQTYTLLLSCCTEARSPYDMGFCHELMAVSGHPAHM 675
           + TYT L+S   +AR   +     E M  +G P ++
Sbjct: 495 VVTYTTLISGLCKARKVDEAERVMEEMRNAGCPPNL 530



 Score =  163 bits (413), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 115/419 (27%), Positives = 207/419 (49%), Gaps = 20/419 (4%)

Query: 244 HSNRLNSNFKSNLQP-SDAKVVECVSERFSKPSREMKI--------PAGLAPFSRHFAST 294
           HS R  S  + +L P S A     +  R     ++ K+        PA +  FS    S 
Sbjct: 21  HSGRPWSAIEPDLSPFSGASTTPRIVGRVVNSLKDAKLALAFFRWAPASIPGFSHTAFSW 80

Query: 295 GNVVESVSRILRQWKWGPL-AEEALGNTNYSMDAYQANQVLKQL---QDHTVALGFFNWL 350
            ++++ + R  +  + G L   E L +    + +Y  N V+       D   AL     +
Sbjct: 81  NSLLQVLVRCKKHREAGDLFRSELLASCEPDVCSY--NIVISGFCNAGDLHAALELLEEM 138

Query: 351 RRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANY 410
           +  AGF  D  T+T ++  +  A   G ++  +D +   GC PNVVTY  LI ++ RA  
Sbjct: 139 K-SAGFAPDAFTHTPIITAMANA---GDLDGAMDHLRSMGCDPNVVTYTALIAAFARAKK 194

Query: 411 LNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSV 470
           L EA+ + ++M+  GC P+ VTY  L+D   K   +  A D+ KKM   G +P+  T++ 
Sbjct: 195 LEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKKMIEGGFAPNVMTFNS 254

Query: 471 IINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAG 530
           +++   K G++  A +L   MV +G  PN+VTY+ +I    K++ +  A ++  +M+  G
Sbjct: 255 LVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFLEAKEVLEEMKTRG 314

Query: 531 FEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAW 590
             PD  TYS ++  L     ++EAE +   M      PD  VY  ++  + K+G + +A 
Sbjct: 315 VTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSSIIHAFCKSGKLLEAQ 374

Query: 591 EWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLG-LKPSLQTYTLLLS 648
           +  + M +    P+V T N+++    ++G++++A  +L+ M   G + P + TY+ +++
Sbjct: 375 KTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILEQMQESGDVLPDVVTYSTVIN 433



 Score =  150 bits (379), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 88/278 (31%), Positives = 146/278 (52%), Gaps = 1/278 (0%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           G + +  TY+ ++  L ++++F    ++L++M   G  P+  TY+ LIH   +A+ + EA
Sbjct: 279 GMRPNVVTYSALIDGLCKSQKFLEAKEVLEEMKTRGVTPDAFTYSALIHGLCKADKIEEA 338

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
             + ++M   GC PD V Y ++I    K+G L  A    ++M+    SPD  TY+ +I+ 
Sbjct: 339 EQMLRRMAGSGCTPDVVVYSSIIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDG 398

Query: 475 LGKAGHLQAAHQLFCEMVNQG-CIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEP 533
           L K G +  A  +  +M   G  +P++VTY+ +I    K+     A KL   M  AG  P
Sbjct: 399 LCKLGKIAEAQVILEQMQESGDVLPDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNP 458

Query: 534 DKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWY 593
           D VTY+ +++ L  CG L+EAE +   M+R    P+   Y  L+    KA  V +A    
Sbjct: 459 DVVTYTTIIDGLCKCGRLEEAEYLLQGMKRAGCAPNVVTYTTLISGLCKARKVDEAERVM 518

Query: 594 EAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGM 631
           E M  AG  PN+ T N++++     G++ +A  L+Q M
Sbjct: 519 EEMRNAGCPPNLVTYNTMVNGLCVSGRIKEAQQLVQRM 556



 Score =  116 bits (291), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 70/207 (33%), Positives = 111/207 (53%), Gaps = 3/207 (1%)

Query: 359 DEHTYTTMVGILGRARQFGAINKLLDQMVRDG-CQPNVVTYNRLIHSYGRANYLNEALDV 417
           D  TY T++  L +  +      +L+QM   G   P+VVTY+ +I+   +++ L EA  +
Sbjct: 388 DVVTYNTVIDGLCKLGKIAEAQVILEQMQESGDVLPDVVTYSTVINGLCKSDMLVEAQKL 447

Query: 418 FKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGK 477
             +M   GC PD VTY T+ID   K G L+ A  + + M+ AG +P+  TY+ +I+ L K
Sbjct: 448 LDRMCKAGCNPDVVTYTTIIDGLCKCGRLEEAEYLLQGMKRAGCAPNVVTYTTLISGLCK 507

Query: 478 AGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFE--PDK 535
           A  +  A ++  EM N GC PNLVTYN M+     +   + A +L + M++   E  PD 
Sbjct: 508 ARKVDEAERVMEEMRNAGCPPNLVTYNTMVNGLCVSGRIKEAQQLVQRMKDGRAECSPDA 567

Query: 536 VTYSIVMEVLGHCGYLDEAEAVFAEMR 562
            TY  ++  L     + EAE +  +M+
Sbjct: 568 ATYRTIVNALMSSDLVQEAEQLLEQMK 594



 Score = 86.7 bits (213), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 51/141 (36%), Positives = 76/141 (53%), Gaps = 2/141 (1%)

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
           +AG   D  TYTT++  L +  +      LL  M R GC PNVVTY  LI    +A  ++
Sbjct: 453 KAGCNPDVVTYTTIIDGLCKCGRLEEAEYLLQGMKRAGCAPNVVTYTTLISGLCKARKVD 512

Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQ--AAGLSPDTFTYSV 470
           EA  V ++M+  GC P+ VTY T+++    +G +  A  + ++M+   A  SPD  TY  
Sbjct: 513 EAERVMEEMRNAGCPPNLVTYNTMVNGLCVSGRIKEAQQLVQRMKDGRAECSPDAATYRT 572

Query: 471 IINCLGKAGHLQAAHQLFCEM 491
           I+N L  +  +Q A QL  +M
Sbjct: 573 IVNALMSSDLVQEAEQLLEQM 593



 Score = 58.5 bits (140), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 29/109 (26%), Positives = 61/109 (55%), Gaps = 2/109 (1%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           ++AG   +  TYTT++  L +AR+     +++++M   GC PN+VTYN +++    +  +
Sbjct: 487 KRAGCAPNVVTYTTLISGLCKARKVDEAERVMEEMRNAGCPPNLVTYNTMVNGLCVSGRI 546

Query: 412 NEALDVFKQMQ--VVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQA 458
            EA  + ++M+     C PD  TY T+++    +  +  A  + ++M++
Sbjct: 547 KEAQQLVQRMKDGRAECSPDAATYRTIVNALMSSDLVQEAEQLLEQMKS 595


>gi|125548610|gb|EAY94432.1| hypothetical protein OsI_16202 [Oryza sativa Indica Group]
 gi|125590647|gb|EAZ30997.1| hypothetical protein OsJ_15079 [Oryza sativa Japonica Group]
          Length = 485

 Score =  165 bits (417), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 93/314 (29%), Positives = 161/314 (51%), Gaps = 1/314 (0%)

Query: 334 LKQLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQP 393
           L +L +   A   F+ ++ + G +    ++ TM+  + RA        L  +M   G  P
Sbjct: 126 LVRLGELASAQNVFDEMQSR-GVRRTVVSFNTMISGMCRAGDLDGAETLHRRMSEAGVTP 184

Query: 394 NVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMY 453
           +V TY  LI    R   + +A  VF++M   G +P+ V +  LID H K G  +  ++++
Sbjct: 185 DVYTYGALIQGLCRVGRIEDARGVFEKMCGRGMKPNAVVFTILIDAHCKKGDAETMLELH 244

Query: 454 KKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKA 513
           ++M+  G+ PD  TY+ I+N L +A  L++A  +  EM + G  P+ VTY  +I    K 
Sbjct: 245 REMRERGVRPDAVTYNAIVNGLCRARDLKSASGIVVEMRSAGLRPDTVTYTTLIDGYCKE 304

Query: 514 RNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVY 573
                A+++ ++M   G   D+VTY+ ++  L   G   +AE V  EM      PD   Y
Sbjct: 305 EELDMAMEIKQNMVAEGVGLDEVTYTALISGLSKAGRSADAERVLGEMMEAGLEPDNTTY 364

Query: 574 GLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLN 633
            +++D + + G+V+      + M   G +P V T N +++ F ++GQ+ +A  LL  M+N
Sbjct: 365 TMVIDAFCRKGDVKTGLRLLKEMQNKGRKPGVVTYNVIMNGFCKLGQMKNADMLLNAMIN 424

Query: 634 LGLKPSLQTYTLLL 647
           +G+ P   TY +LL
Sbjct: 425 IGVSPDDITYNILL 438



 Score =  144 bits (362), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 81/263 (30%), Positives = 136/263 (51%)

Query: 385 QMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAG 444
           Q++  G  P    +N L+    R   L  A +VF +MQ  G     V++ T+I    +AG
Sbjct: 106 QLLDAGLPPEAKLFNVLMRDLVRLGELASAQNVFDEMQSRGVRRTVVSFNTMISGMCRAG 165

Query: 445 FLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYN 504
            LD A  ++++M  AG++PD +TY  +I  L + G ++ A  +F +M  +G  PN V + 
Sbjct: 166 DLDGAETLHRRMSEAGVTPDVYTYGALIQGLCRVGRIEDARGVFEKMCGRGMKPNAVVFT 225

Query: 505 IMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRK 564
           I+I    K  + ++ L+L+R+M+  G  PD VTY+ ++  L     L  A  +  EMR  
Sbjct: 226 ILIDAHCKKGDAETMLELHREMRERGVRPDAVTYNAIVNGLCRARDLKSASGIVVEMRSA 285

Query: 565 NWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDA 624
              PD   Y  L+D + K   +  A E  + M+  G+  +  T  +L+S   + G+ +DA
Sbjct: 286 GLRPDTVTYTTLIDGYCKEEELDMAMEIKQNMVAEGVGLDEVTYTALISGLSKAGRSADA 345

Query: 625 YHLLQGMLNLGLKPSLQTYTLLL 647
             +L  M+  GL+P   TYT+++
Sbjct: 346 ERVLGEMMEAGLEPDNTTYTMVI 368



 Score =  127 bits (319), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 79/272 (29%), Positives = 135/272 (49%), Gaps = 4/272 (1%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           G K +   +T ++    +      + +L  +M   G +P+ VTYN +++   RA  L  A
Sbjct: 216 GMKPNAVVFTILIDAHCKKGDAETMLELHREMRERGVRPDAVTYNAIVNGLCRARDLKSA 275

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
             +  +M+  G  PD VTY TLID + K   LD+AM++ + M A G+  D  TY+ +I+ 
Sbjct: 276 SGIVVEMRSAGLRPDTVTYTTLIDGYCKEEELDMAMEIKQNMVAEGVGLDEVTYTALISG 335

Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPD 534
           L KAG    A ++  EM+  G  P+  TY ++I    +  + ++ L+L ++MQN G +P 
Sbjct: 336 LSKAGRSADAERVLGEMMEAGLEPDNTTYTMVIDAFCRKGDVKTGLRLLKEMQNKGRKPG 395

Query: 535 KVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYE 594
            VTY+++M      G +  A+ +   M      PD+  Y +L+D   K G V    E   
Sbjct: 396 VVTYNVIMNGFCKLGQMKNADMLLNAMINIGVSPDDITYNILLDGHCKHGKVTDIEELKS 455

Query: 595 AMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYH 626
           A    G  P++    S++   ++  + +  YH
Sbjct: 456 A---KGTVPDLGVYTSIVGEIVK-KKTTKTYH 483



 Score =  118 bits (296), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 76/228 (33%), Positives = 120/228 (52%), Gaps = 7/228 (3%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           R+ G + D  TY  +V  L RAR   + + ++ +M   G +P+ VTY  LI  Y +   L
Sbjct: 248 RERGVRPDAVTYNAIVNGLCRARDLKSASGIVVEMRSAGLRPDTVTYTTLIDGYCKEEEL 307

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
           + A+++ + M   G   D VTY  LI   +KAG    A  +  +M  AGL PD  TY+++
Sbjct: 308 DMAMEIKQNMVAEGVGLDEVTYTALISGLSKAGRSADAERVLGEMMEAGLEPDNTTYTMV 367

Query: 472 INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF 531
           I+   + G ++   +L  EM N+G  P +VTYN+++    K    ++A  L   M N G 
Sbjct: 368 IDAFCRKGDVKTGLRLLKEMQNKGRKPGVVTYNVIMNGFCKLGQMKNADMLLNAMINIGV 427

Query: 532 EPDKVTYSIVMEVLGHC--GYLDEAEAVFAEMRRKNWVPDEPVYGLLV 577
            PD +TY+I+++  GHC  G + + E + +    K  VPD  VY  +V
Sbjct: 428 SPDDITYNILLD--GHCKHGKVTDIEELKSA---KGTVPDLGVYTSIV 470



 Score =  109 bits (272), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 62/212 (29%), Positives = 108/212 (50%), Gaps = 11/212 (5%)

Query: 453 YKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAK 512
           Y ++  AGL P+   ++V++  L + G L +A  +F EM ++G    +V++N MI+   +
Sbjct: 104 YLQLLDAGLPPEAKLFNVLMRDLVRLGELASAQNVFDEMQSRGVRRTVVSFNTMISGMCR 163

Query: 513 ARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPV 572
           A +   A  L+R M  AG  PD  TY  +++ L   G +++A  VF +M  +   P+  V
Sbjct: 164 AGDLDGAETLHRRMSEAGVTPDVYTYGALIQGLCRVGRIEDARGVFEKMCGRGMKPNAVV 223

Query: 573 YGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGML 632
           + +L+D   K G+     E +  M + G+RP+  T N++++   R   L  A  ++  M 
Sbjct: 224 FTILIDAHCKKGDAETMLELHREMRERGVRPDAVTYNAIVNGLCRARDLKSASGIVVEMR 283

Query: 633 NLGLKPSLQTYTLLLSCCTEARSPYDMGFCHE 664
           + GL+P   TYT L+            G+C E
Sbjct: 284 SAGLRPDTVTYTTLID-----------GYCKE 304


>gi|291622145|emb|CBJ23782.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
           thaliana]
          Length = 630

 Score =  165 bits (417), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 95/297 (31%), Positives = 158/297 (53%), Gaps = 4/297 (1%)

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
           + G+K D  T+ T++  L    +      L+D+MV  GCQP++ TY  +++   +   ++
Sbjct: 179 EMGYKPDTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDID 238

Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
            AL + K+M+    E + V Y T+ID   K   +D A D++ KM+  G+ PD FTY+ +I
Sbjct: 239 LALSLLKKMEKGKIEANVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNSLI 298

Query: 473 NCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFE 532
           +CL   G    A +L  +M+ +   PN+VT+N +I   AK      A KL+ +M     +
Sbjct: 299 SCLCNYGRWSDASRLLSDMIERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSID 358

Query: 533 PDKVTYSIVMEVLGHCGY--LDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAW 590
           P+ VTY+ ++   G C +  LDEA+ +F  M  K+ +PD   Y  L+  + KA  V +  
Sbjct: 359 PNIVTYNSLIN--GFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLIKGFCKAKRVEEGM 416

Query: 591 EWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
           E +  M Q GL  N  T N+L+    + G    A  + + M++ G+ P + TY++LL
Sbjct: 417 ELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILL 473



 Score =  153 bits (387), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 92/305 (30%), Positives = 155/305 (50%), Gaps = 1/305 (0%)

Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLI 402
           A   FN +  + G K D  TY +++  L    ++   ++LL  M+     PNVVT+N LI
Sbjct: 275 AFDLFNKMETK-GIKPDVFTYNSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFNSLI 333

Query: 403 HSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLS 462
            ++ +   L EA  +F +M     +P+ VTY +LI+       LD A  ++  M +    
Sbjct: 334 DAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCL 393

Query: 463 PDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKL 522
           PD  TY+ +I    KA  ++   +LF EM  +G + N VTYN +I    +A +   A K+
Sbjct: 394 PDVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKI 453

Query: 523 YRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGK 582
           ++ M + G  PD +TYSI+++ L   G L++A  VF  +++    P+   Y ++++   K
Sbjct: 454 FKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPNIYTYNIMIEGMCK 513

Query: 583 AGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQT 642
           AG V   W+ + ++   G++PNV    +++S F R G   +A  L + M   G  P    
Sbjct: 514 AGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPDSGC 573

Query: 643 YTLLL 647
           Y  L+
Sbjct: 574 YNTLI 578



 Score =  149 bits (376), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 111/434 (25%), Positives = 191/434 (44%), Gaps = 57/434 (13%)

Query: 276 REMKIPAGLAPFSR--HFASTGNVVESVSRILRQWKWGPLAEEALG------NTNYSMDA 327
           R  ++P  LA   +        ++V ++S +L  +  G    EA+          Y  D 
Sbjct: 128 RRSQLPLALAVLGKMMKLGYEPDIV-TLSSLLNGYCHGKRISEAVALVDQMVEMGYKPDT 186

Query: 328 YQANQVLKQLQDHTVALGFFNWLRRQA--GFKHDEHTYTTMVGILGRARQFGAINKLLDQ 385
              N ++  L  H  A      + R    G + D  TY T+V  L +         LL +
Sbjct: 187 VTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKK 246

Query: 386 MVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTY-------C---- 434
           M +   + NVV YN +I    +  ++++A D+F +M+  G +PD  TY       C    
Sbjct: 247 MEKGKIEANVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNSLISCLCNYGR 306

Query: 435 ------------------------TLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSV 470
                                   +LID  AK G L  A  ++ +M    + P+  TY+ 
Sbjct: 307 WSDASRLLSDMIERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNS 366

Query: 471 IINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAG 530
           +IN       L  A Q+F  MV++ C+P++VTYN +I    KA+  +  ++L+R+M   G
Sbjct: 367 LINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLIKGFCKAKRVEEGMELFREMSQRG 426

Query: 531 FEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAW 590
              + VTY+ +++ L   G  D A+ +F +M      PD   Y +L+D   K G + KA 
Sbjct: 427 LVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKAL 486

Query: 591 EWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCC 650
             +E + ++ + PN+ T N ++    + G++ D + L   +   G+KP++  YT ++S  
Sbjct: 487 VVFEYLQKSKMEPNIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMIS-- 544

Query: 651 TEARSPYDMGFCHE 664
                    GFC +
Sbjct: 545 ---------GFCRK 549



 Score =  145 bits (367), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 90/315 (28%), Positives = 158/315 (50%), Gaps = 7/315 (2%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           G  H+ +TY+ ++    R  Q      +L +M++ G +P++VT + L++ Y     ++EA
Sbjct: 111 GIPHNHYTYSILLNCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEA 170

Query: 415 LDVFKQMQVVGCEPDRVTYCTLID---IHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
           + +  QM  +G +PD VT+ TLI    +H KA     A+ +  +M A G  PD FTY  +
Sbjct: 171 VALVDQMVEMGYKPDTVTFNTLIHGLFLHNKAS---EAVALIDRMVARGCQPDLFTYGTV 227

Query: 472 INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF 531
           +N L K G +  A  L  +M       N+V YN +I    K ++   A  L+  M+  G 
Sbjct: 228 VNGLCKRGDIDLALSLLKKMEKGKIEANVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGI 287

Query: 532 EPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWE 591
           +PD  TY+ ++  L + G   +A  + ++M  +   P+   +  L+D + K G + +A +
Sbjct: 288 KPDVFTYNSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFNSLIDAFAKEGKLIEAEK 347

Query: 592 WYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTY-TLLLSCC 650
            ++ M+Q  + PN+ T NSL++ F    +L +A  +   M++    P + TY TL+   C
Sbjct: 348 LFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLIKGFC 407

Query: 651 TEARSPYDMGFCHEL 665
              R    M    E+
Sbjct: 408 KAKRVEEGMELFREM 422



 Score =  142 bits (358), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 80/293 (27%), Positives = 154/293 (52%)

Query: 362 TYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQM 421
           T+ +++    +  +     KL D+M++    PN+VTYN LI+ +   + L+EA  +F  M
Sbjct: 328 TFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLM 387

Query: 422 QVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHL 481
               C PD VTY TLI    KA  ++  M+++++M   GL  +T TY+ +I  L +AG  
Sbjct: 388 VSKDCLPDVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDC 447

Query: 482 QAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIV 541
             A ++F +MV+ G  P+++TY+I++    K    + AL ++  +Q +  EP+  TY+I+
Sbjct: 448 DMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPNIYTYNIM 507

Query: 542 MEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGL 601
           +E +   G +++   +F  +  K   P+  +Y  ++  + + G   +A   +  M + G 
Sbjct: 508 IEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGT 567

Query: 602 RPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEAR 654
            P+    N+L+ A LR G  + +  L++ M + G      T +++++   + R
Sbjct: 568 LPDSGCYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVINMLHDGR 620



 Score =  126 bits (316), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 104/398 (26%), Positives = 179/398 (44%), Gaps = 28/398 (7%)

Query: 363 YTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQ 422
           ++ ++  + +  +F  +  L +QM   G   N  TY+ L++ + R + L  AL V  +M 
Sbjct: 84  FSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILLNCFCRRSQLPLALAVLGKMM 143

Query: 423 VVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQ 482
            +G EPD VT  +L++ +     +  A+ +  +M   G  PDT T++ +I+ L       
Sbjct: 144 KLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMVEMGYKPDTVTFNTLIHGLFLHNKAS 203

Query: 483 AAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVM 542
            A  L   MV +GC P+L TY  ++    K  +   AL L + M+    E + V Y+ ++
Sbjct: 204 EAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEANVVIYNTII 263

Query: 543 EVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLR 602
           + L    ++D+A  +F +M  K   PD   Y  L+      G    A      M++  + 
Sbjct: 264 DGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNSLISCLCNYGRWSDASRLLSDMIERKIN 323

Query: 603 PNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGFC 662
           PNV T NSL+ AF + G+L +A  L   M+   + P++ TY  L++           GFC
Sbjct: 324 PNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLIN-----------GFC 372

Query: 663 -HELMAVSGHPAHMFLLSMPSPG-PDGQNVRDHVGSFLEMMHSED-----RE-SKRGLVD 714
            H+ +        +F L +     PD       +  F +    E+     RE S+RGLV 
Sbjct: 373 MHDRL---DEAQQIFTLMVSKDCLPDVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVG 429

Query: 715 AVVDF------LHKSGLKEEAGSVWEVAAQKNVYPDAV 746
             V +      L ++G  + A  +++      V PD +
Sbjct: 430 NTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDII 467



 Score =  109 bits (272), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 70/266 (26%), Positives = 128/266 (48%)

Query: 382 LLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHA 441
           L  +MV+    P+++ +++L+ +  + N  +  + + +QMQ +G   +  TY  L++   
Sbjct: 68  LFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILLNCFC 127

Query: 442 KAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLV 501
           +   L +A+ +  KM   G  PD  T S ++N       +  A  L  +MV  G  P+ V
Sbjct: 128 RRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMVEMGYKPDTV 187

Query: 502 TYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEM 561
           T+N +I           A+ L   M   G +PD  TY  V+  L   G +D A ++  +M
Sbjct: 188 TFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKM 247

Query: 562 RRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQL 621
            +     +  +Y  ++D   K  ++  A++ +  M   G++P+V T NSL+S     G+ 
Sbjct: 248 EKGKIEANVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNSLISCLCNYGRW 307

Query: 622 SDAYHLLQGMLNLGLKPSLQTYTLLL 647
           SDA  LL  M+   + P++ T+  L+
Sbjct: 308 SDASRLLSDMIERKINPNVVTFNSLI 333



 Score =  105 bits (263), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 64/232 (27%), Positives = 118/232 (50%), Gaps = 1/232 (0%)

Query: 359 DEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVF 418
           D  TY T++    +A++     +L  +M + G   N VTYN LI    +A   + A  +F
Sbjct: 395 DVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIF 454

Query: 419 KQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKA 478
           K+M   G  PD +TY  L+D   K G L+ A+ +++ +Q + + P+ +TY+++I  + KA
Sbjct: 455 KKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPNIYTYNIMIEGMCKA 514

Query: 479 GHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTY 538
           G ++    LFC +  +G  PN++ Y  MI+   +    + A  L+R+M+  G  PD   Y
Sbjct: 515 GKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPDSGCY 574

Query: 539 SIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAW 590
           + ++      G    +  +  EMR   +V D     +++++    G + K++
Sbjct: 575 NTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVINML-HDGRLEKSY 625



 Score =  102 bits (254), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 64/245 (26%), Positives = 117/245 (47%), Gaps = 1/245 (0%)

Query: 411 LNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSV 470
           L++A+ +F +M      P  + +  L+   AK    DV + + ++MQ  G+  + +TYS+
Sbjct: 62  LDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSI 121

Query: 471 IINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAG 530
           ++NC  +   L  A  +  +M+  G  P++VT + ++      +    A+ L   M   G
Sbjct: 122 LLNCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMVEMG 181

Query: 531 FEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAW 590
           ++PD VT++ ++  L       EA A+   M  +   PD   YG +V+   K G++  A 
Sbjct: 182 YKPDTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLAL 241

Query: 591 EWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSC- 649
              + M +  +  NV   N+++    +   + DA+ L   M   G+KP + TY  L+SC 
Sbjct: 242 SLLKKMEKGKIEANVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNSLISCL 301

Query: 650 CTEAR 654
           C   R
Sbjct: 302 CNYGR 306



 Score = 96.7 bits (239), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 58/202 (28%), Positives = 107/202 (52%), Gaps = 1/202 (0%)

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
           Q G   +  TY T++  L +A       K+  +MV DG  P+++TY+ L+    +   L 
Sbjct: 424 QRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLE 483

Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
           +AL VF+ +Q    EP+  TY  +I+   KAG ++   D++  +   G+ P+   Y+ +I
Sbjct: 484 KALVVFEYLQKSKMEPNIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMI 543

Query: 473 NCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFE 532
           +   + G  + A  LF EM   G +P+   YN +I  + +  +  ++ +L ++M++ GF 
Sbjct: 544 SGFCRKGLKEEADALFREMKEDGTLPDSGCYNTLIRARLRDGDKAASAELIKEMRSCGFV 603

Query: 533 PDKVTYSIVMEVLGHCGYLDEA 554
            D  T S+V+ +L H G L+++
Sbjct: 604 GDASTISMVINML-HDGRLEKS 624



 Score = 67.0 bits (162), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 61/289 (21%), Positives = 114/289 (39%), Gaps = 35/289 (12%)

Query: 481 LQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSI 540
           L  A  LF EMV     P+++ ++ +++  AK   +   + L   MQN G   +  TYSI
Sbjct: 62  LDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSI 121

Query: 541 VMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAG 600
           ++        L  A AV  +M +  + PD      L++ +     + +A    + M++ G
Sbjct: 122 LLNCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMVEMG 181

Query: 601 LRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMG 660
            +P+  T N+L+       + S+A  L+  M+  G +P L TY  +++           G
Sbjct: 182 YKPDTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVN-----------G 230

Query: 661 FCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRESKRGLVDAVVDFL 720
            C                         +   D   S L+ M     E+   + + ++D L
Sbjct: 231 LCK------------------------RGDIDLALSLLKKMEKGKIEANVVIYNTIIDGL 266

Query: 721 HKSGLKEEAGSVWEVAAQKNVYPDAVKEKGMSYWLINLHVMSDGTAVIA 769
            K    ++A  ++     K + PD      +   L N    SD + +++
Sbjct: 267 CKYKHMDDAFDLFNKMETKGIKPDVFTYNSLISCLCNYGRWSDASRLLS 315



 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 38/168 (22%), Positives = 83/168 (49%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           G   D  TY+ ++  L +  +      + + + +   +PN+ TYN +I    +A  + + 
Sbjct: 461 GVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPNIYTYNIMIEGMCKAGKVEDG 520

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
            D+F  + + G +P+ + Y T+I    + G  + A  ++++M+  G  PD+  Y+ +I  
Sbjct: 521 WDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPDSGCYNTLIRA 580

Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKL 522
             + G   A+ +L  EM + G + +  T +++I +    R  +S L++
Sbjct: 581 RLRDGDKAASAELIKEMRSCGFVGDASTISMVINMLHDGRLEKSYLEM 628


>gi|15221411|ref|NP_177623.1| plastid transcriptionally active 2 [Arabidopsis thaliana]
 gi|75194055|sp|Q9S7Q2.1|PP124_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g74850, chloroplastic; AltName: Full=Protein PLASTID
           TRANSCRIPTIONALLY ACTIVE 2; Flags: Precursor
 gi|5882738|gb|AAD55291.1|AC008263_22 Contains 3 PF|01535 DUF17 domains [Arabidopsis thaliana]
 gi|12323908|gb|AAG51934.1|AC013258_28 hypothetical protein; 81052-84129 [Arabidopsis thaliana]
 gi|332197518|gb|AEE35639.1| plastid transcriptionally active 2 [Arabidopsis thaliana]
          Length = 862

 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 95/351 (27%), Positives = 168/351 (47%), Gaps = 36/351 (10%)

Query: 339 DHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTY 398
           D   +L  F +++RQ   K +EH YT M+ +LGR        ++ D+M   G   +V +Y
Sbjct: 120 DWQRSLRLFKYMQRQIWCKPNEHIYTIMISLLGREGLLDKCLEVFDEMPSQGVSRSVFSY 179

Query: 399 NRLIHSYGRANYLNEALDV------------------------------------FKQMQ 422
             LI++YGR      +L++                                    F +M+
Sbjct: 180 TALINAYGRNGRYETSLELLDRMKNEKISPSILTYNTVINACARGGLDWEGLLGLFAEMR 239

Query: 423 VVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQ 482
             G +PD VTY TL+   A  G  D A  +++ M   G+ PD  TYS ++   GK   L+
Sbjct: 240 HEGIQPDIVTYNTLLSACAIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLE 299

Query: 483 AAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVM 542
               L  EM + G +P++ +YN+++   AK+ + + A+ ++  MQ AG  P+  TYS+++
Sbjct: 300 KVCDLLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLL 359

Query: 543 EVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLR 602
            + G  G  D+   +F EM+  N  PD   Y +L++++G+ G  ++    +  M++  + 
Sbjct: 360 NLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIE 419

Query: 603 PNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEA 653
           P++ T   ++ A  + G   DA  +LQ M    + PS + YT ++    +A
Sbjct: 420 PDMETYEGIIFACGKGGLHEDARKILQYMTANDIVPSSKAYTGVIEAFGQA 470



 Score =  152 bits (385), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 86/301 (28%), Positives = 158/301 (52%), Gaps = 3/301 (0%)

Query: 344 LGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDG-CQPNVVTYNRLI 402
           LG F  +R + G + D  TY T++      R  G   +++ + + DG   P++ TY+ L+
Sbjct: 232 LGLFAEMRHE-GIQPDIVTYNTLLSACA-IRGLGDEAEMVFRTMNDGGIVPDLTTYSHLV 289

Query: 403 HSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLS 462
            ++G+   L +  D+  +M   G  PD  +Y  L++ +AK+G +  AM ++ +MQAAG +
Sbjct: 290 ETFGKLRRLEKVCDLLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCT 349

Query: 463 PDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKL 522
           P+  TYSV++N  G++G      QLF EM +    P+  TYNI+I +  +   ++  + L
Sbjct: 350 PNANTYSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTL 409

Query: 523 YRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGK 582
           + DM     EPD  TY  ++   G  G  ++A  +   M   + VP    Y  +++ +G+
Sbjct: 410 FHDMVEENIEPDMETYEGIIFACGKGGLHEDARKILQYMTANDIVPSSKAYTGVIEAFGQ 469

Query: 583 AGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQT 642
           A    +A   +  M + G  P++ T +SLL +F R G + ++  +L  +++ G+  +  T
Sbjct: 470 AALYEEALVAFNTMHEVGSNPSIETFHSLLYSFARGGLVKESEAILSRLVDSGIPRNRDT 529

Query: 643 Y 643
           +
Sbjct: 530 F 530



 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 127/536 (23%), Positives = 226/536 (42%), Gaps = 46/536 (8%)

Query: 354 AGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNE 413
            G   D  TY+ +V   G+ R+   +  LL +M   G  P++ +YN L+ +Y ++  + E
Sbjct: 276 GGIVPDLTTYSHLVETFGKLRRLEKVCDLLGEMASGGSLPDITSYNVLLEAYAKSGSIKE 335

Query: 414 ALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIIN 473
           A+ VF QMQ  GC P+  TY  L+++  ++G  D    ++ +M+++   PD  TY+++I 
Sbjct: 336 AMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIE 395

Query: 474 CLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEP 533
             G+ G+ +    LF +MV +   P++ TY  +I    K   ++ A K+ + M      P
Sbjct: 396 VFGEGGYFKEVVTLFHDMVEENIEPDMETYEGIIFACGKGGLHEDARKILQYMTANDIVP 455

Query: 534 DKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWY 593
               Y+ V+E  G     +EA   F  M      P    +  L+  + + G V+++    
Sbjct: 456 SSKAYTGVIEAFGQAALYEEALVAFNTMHEVGSNPSIETFHSLLYSFARGGLVKESEAIL 515

Query: 594 EAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEA 653
             ++ +G+  N  T N+ + A+ + G+  +A      M      P  +T   +LS  + A
Sbjct: 516 SRLVDSGIPRNRDTFNAQIEAYKQGGKFEEAVKTYVDMEKSRCDPDERTLEAVLSVYSFA 575

Query: 654 R-----------------SPYDMGFCHELMAVSGHPA--------------------HMF 676
           R                  P  M +C  ++AV G                       H  
Sbjct: 576 RLVDECREQFEEMKASDILPSIMCYCM-MLAVYGKTERWDDVNELLEEMLSNRVSNIHQV 634

Query: 677 LLSMPSPGPDGQNVRDHVGSFLEMMHSEDRESKRGLVDAVVDFLHKSGLKEEAGSVWEVA 736
           +  M     D  +    V   L+ ++SE         +A++D L   G KE A  V   A
Sbjct: 635 IGQMIKGDYDDDSNWQIVEYVLDKLNSEGCGLGIRFYNALLDALWWLGQKERAARVLNEA 694

Query: 737 AQKNVYPDAVKEKGMSYWLINLHVMSDGTAVIALSRTLAWFR--KQMLISGVGPSRIDIV 794
            ++ ++P+  ++  +  W +++H MS+G    ALS    W      ML+ G  P    +V
Sbjct: 695 TKRGLFPELFRKNKL-VWSVDVHRMSEGGMYTALS---VWLNDINDMLLKGDLPQLAVVV 750

Query: 795 TGWGR--RSRVTGTSLVRQAVQELLHMFSFPFFTENGNSGCFVGCGEPLNKWLLQS 848
           +  G+  +S     S + +A    L       F+  G +G  + C     K LL +
Sbjct: 751 SVRGQLEKSSAARESPIAKAAFSFLQDHVSSSFSFTGWNGGRIMCQRSQLKQLLST 806



 Score =  141 bits (355), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 82/287 (28%), Positives = 142/287 (49%), Gaps = 1/287 (0%)

Query: 362 TYTTMVGILGRA-RQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQ 420
           TY T++    R    +  +  L  +M  +G QP++VTYN L+ +       +EA  VF+ 
Sbjct: 213 TYNTVINACARGGLDWEGLLGLFAEMRHEGIQPDIVTYNTLLSACAIRGLGDEAEMVFRT 272

Query: 421 MQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGH 480
           M   G  PD  TY  L++   K   L+   D+  +M + G  PD  +Y+V++    K+G 
Sbjct: 273 MNDGGIVPDLTTYSHLVETFGKLRRLEKVCDLLGEMASGGSLPDITSYNVLLEAYAKSGS 332

Query: 481 LQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSI 540
           ++ A  +F +M   GC PN  TY++++ L  ++  Y    +L+ +M+++  +PD  TY+I
Sbjct: 333 IKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNI 392

Query: 541 VMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAG 600
           ++EV G  GY  E   +F +M  +N  PD   Y  ++   GK G    A +  + M    
Sbjct: 393 LIEVFGEGGYFKEVVTLFHDMVEENIEPDMETYEGIIFACGKGGLHEDARKILQYMTAND 452

Query: 601 LRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
           + P+      ++ AF +     +A      M  +G  PS++T+  LL
Sbjct: 453 IVPSSKAYTGVIEAFGQAALYEEALVAFNTMHEVGSNPSIETFHSLL 499



 Score = 93.6 bits (231), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 73/309 (23%), Positives = 143/309 (46%), Gaps = 6/309 (1%)

Query: 449 AMDMYKKMQ-AAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMI 507
           ++ ++K MQ      P+   Y+++I+ LG+ G L    ++F EM +QG   ++ +Y  +I
Sbjct: 124 SLRLFKYMQRQIWCKPNEHIYTIMISLLGREGLLDKCLEVFDEMPSQGVSRSVFSYTALI 183

Query: 508 ALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAE-AVFAEMRRKNW 566
               +   Y+++L+L   M+N    P  +TY+ V+      G   E    +FAEMR +  
Sbjct: 184 NAYGRNGRYETSLELLDRMKNEKISPSILTYNTVINACARGGLDWEGLLGLFAEMRHEGI 243

Query: 567 VPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYH 626
            PD   Y  L+      G   +A   +  M   G+ P++ T + L+  F ++ +L     
Sbjct: 244 QPDIVTYNTLLSACAIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLEKVCD 303

Query: 627 LLQGMLNLGLKPSLQTYTLLLSCCTEARSPYD-MGFCHELMAVSGHP-AHMFLLSMPSPG 684
           LL  M + G  P + +Y +LL    ++ S  + MG  H++ A    P A+ + + +   G
Sbjct: 304 LLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFG 363

Query: 685 PDGQNVRDHVGSFLEMMHSEDRESKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPD 744
             G+   D V      M S + +      + +++   + G  +E  +++    ++N+ PD
Sbjct: 364 QSGR--YDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPD 421

Query: 745 AVKEKGMSY 753
               +G+ +
Sbjct: 422 METYEGIIF 430


>gi|222634970|gb|EEE65102.1| hypothetical protein OsJ_20158 [Oryza sativa Japonica Group]
          Length = 552

 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 138/476 (28%), Positives = 221/476 (46%), Gaps = 42/476 (8%)

Query: 348 NWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGR 407
           + +R +   K +  T+ +MV  L +A +     K+ D+MVR+G  P+VV+YN L+  Y +
Sbjct: 69  SLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCK 128

Query: 408 ANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFT 467
              L+E+L VF +M   G  PD VT+ +LI    KAG L+ A+ +  +M+  GL  +  T
Sbjct: 129 VGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVT 188

Query: 468 YSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQ 527
           ++ +I+   K G L  A     EM   G  P++V YN +I    K      A +L R+M+
Sbjct: 189 FTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREME 248

Query: 528 NAGFEPDKVTYSIVMEVLGHC--GYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGN 585
               +PD VTYS ++   G+C  G LD A  +  +M +K  +PD   Y  L+    +   
Sbjct: 249 AKRVKPDVVTYSTIIS--GYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKR 306

Query: 586 VRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTL 645
           +  A E +E MLQ G++P+  T  +L+    + G +  A  L   M+  G+ P + TY++
Sbjct: 307 LNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSV 366

Query: 646 LLSCCTE-ARSPYDMGFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSE 704
           L++  ++ AR+                 AH  L  +    P   N++     +  +M   
Sbjct: 367 LINGLSKSART---------------KEAHRLLFKLYHEDPVPDNIK-----YDALMLCC 406

Query: 705 DRESKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAVKEKGMSYWLINLHVMSDG 764
            +   + +V  +  F  K GL +EA  V++    +N   D       S + I +H    G
Sbjct: 407 SKAEFKSVVALLKGFCMK-GLMKEADKVYQSMLDRNWKLDG------SVYSILIHGHCRG 459

Query: 765 TAVIALSRTLAWFRKQMLISGVGP---SRIDIVTGWGRRSRVTGTSLVRQAVQELL 817
             V    R    F KQML SG  P   S I +V G      V        A+Q+LL
Sbjct: 460 GNV----RKALSFHKQMLRSGFSPNSTSTISLVRGLFEEGMVVEAD---NAIQDLL 508



 Score =  150 bits (379), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 85/264 (32%), Positives = 147/264 (55%), Gaps = 1/264 (0%)

Query: 386 MVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGF 445
           MVR G  PNV TYN L+ +      L EA+ V   M+  GC P+ VTY TL+    +AG 
Sbjct: 1   MVRHGVAPNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGE 60

Query: 446 LDVAMDMYKKMQAAG-LSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYN 504
           LD A  +   M+  G   P+  T++ ++N L KAG ++ A ++F EMV +G  P++V+YN
Sbjct: 61  LDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYN 120

Query: 505 IMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRK 564
            +++   K      +L ++ +M   G  PD VT++ ++      G L++A A+ A+MR +
Sbjct: 121 TLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRER 180

Query: 565 NWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDA 624
               +E  +  L+D + K G +  A    E M + G++P+V   N+L++ + ++G++  A
Sbjct: 181 GLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLA 240

Query: 625 YHLLQGMLNLGLKPSLQTYTLLLS 648
             L++ M    +KP + TY+ ++S
Sbjct: 241 RELIREMEAKRVKPDVVTYSTIIS 264



 Score =  107 bits (266), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 80/300 (26%), Positives = 138/300 (46%), Gaps = 54/300 (18%)

Query: 357 KHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALD 416
           K D  TY+T++    +     +  +L  +M++ G  P+ +TY+ LI        LN+A +
Sbjct: 253 KPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACE 312

Query: 417 VFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLG 476
           +F+ M  +G +PD  TY TLID H K G ++ A+ ++ +M   G+ PD  TYSV+IN L 
Sbjct: 313 LFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLS 372

Query: 477 KAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARN---------------YQSALK 521
           K+   + AH+L  ++ ++  +P+ + Y+ ++   +KA                  + A K
Sbjct: 373 KSARTKEAHRLLFKLYHEDPVPDNIKYDALMLCCSKAEFKSVVALLKGFCMKGLMKEADK 432

Query: 522 LYRDMQNAGFEPDKVTYSIVMEVLGHC--GYLDEAEAVFAEMRRKNWVPDEP-----VYG 574
           +Y+ M +  ++ D   YSI++   GHC  G + +A +   +M R  + P+       V G
Sbjct: 433 VYQSMLDRNWKLDGSVYSILIH--GHCRGGNVRKALSFHKQMLRSGFSPNSTSTISLVRG 490

Query: 575 L------------------------------LVDLWGKAGNVRKAWEWYEAMLQAGLRPN 604
           L                              L+DL  K GNV    +    M + GL P+
Sbjct: 491 LFEEGMVVEADNAIQDLLTCCPLADAEASKALIDLNRKEGNVDALIDVLCGMARDGLLPS 550


>gi|302806475|ref|XP_002984987.1| hypothetical protein SELMODRAFT_20977 [Selaginella moellendorffii]
 gi|300147197|gb|EFJ13862.1| hypothetical protein SELMODRAFT_20977 [Selaginella moellendorffii]
          Length = 471

 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 108/397 (27%), Positives = 194/397 (48%), Gaps = 37/397 (9%)

Query: 316 EALGNTNYSMDAYQANQVLKQLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQ 375
           E + +  ++ DA+    ++  + +     G  + LR   G   +  TYT ++    RA++
Sbjct: 14  EEMKSAGFAPDAFTHTPIITAMANAGDLDGAMDHLRSM-GCDPNVVTYTALIAAFARAKK 72

Query: 376 FGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCT 435
                KLL++M   GC PN+VTYN L+ +  + + +  A DV K+M   G  P+ +T+ +
Sbjct: 73  LEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKKMIEGGFAPNVMTFNS 132

Query: 436 LIDIHAKAGFLD-----------------------------------VAMDMYKKMQAAG 460
           L+D   K G +D                                    A ++ ++M+A+G
Sbjct: 133 LVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFLEAKEVLEEMKASG 192

Query: 461 LSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSAL 520
           ++PD FTYS +I+ L KA  ++ A Q+   M   GC P++V Y+ +I    K+     A 
Sbjct: 193 VTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSSIIHAFCKSGKLLEAQ 252

Query: 521 KLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRK-NWVPDEPVYGLLVDL 579
           K  ++M+     PD VTY+ V++ L   G + EA+ +  +M+   + +PD   Y  +++ 
Sbjct: 253 KTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILDQMQESGDVLPDVVTYSTVING 312

Query: 580 WGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPS 639
             K+  + +A +  + M +AG  P+V T  +++    + G+L +A +LLQGM   G  P+
Sbjct: 313 LCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCKCGRLEEAEYLLQGMKRAGCAPN 372

Query: 640 LQTYTLLLSCCTEARSPYDMGFCHELMAVSGHPAHMF 676
           + TYT L+S   +AR   +     E M  +G P ++ 
Sbjct: 373 VVTYTTLISGLCKARKVDEAERVMEEMRNAGCPPNLV 409



 Score =  148 bits (374), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 88/278 (31%), Positives = 146/278 (52%), Gaps = 1/278 (0%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           G + +  TY+ ++  L ++++F    ++L++M   G  P+  TY+ LIH   +A+ + EA
Sbjct: 157 GMRPNVVTYSALIDGLCKSQKFLEAKEVLEEMKASGVTPDAFTYSALIHGLCKADKIEEA 216

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
             + ++M   GC PD V Y ++I    K+G L  A    ++M+    SPD  TY+ +I+ 
Sbjct: 217 EQMLRRMAGSGCTPDVVVYSSIIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDG 276

Query: 475 LGKAGHLQAAHQLFCEMVNQG-CIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEP 533
           L K G +  A  +  +M   G  +P++VTY+ +I    K+     A KL   M  AG  P
Sbjct: 277 LCKLGKIAEAQVILDQMQESGDVLPDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNP 336

Query: 534 DKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWY 593
           D VTY+ +++ L  CG L+EAE +   M+R    P+   Y  L+    KA  V +A    
Sbjct: 337 DVVTYTTIIDGLCKCGRLEEAEYLLQGMKRAGCAPNVVTYTTLISGLCKARKVDEAERVM 396

Query: 594 EAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGM 631
           E M  AG  PN+ T N++++     G++ +A  L+Q M
Sbjct: 397 EEMRNAGCPPNLVTYNTMVNGLCVSGRIKEAQQLVQRM 434



 Score =  125 bits (315), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 83/254 (32%), Positives = 127/254 (50%), Gaps = 5/254 (1%)

Query: 348 NWLRRQAG--FKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSY 405
             LRR AG     D   Y++++    ++ +     K L +M +    P+VVTYN +I   
Sbjct: 218 QMLRRMAGSGCTPDVVVYSSIIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGL 277

Query: 406 GRANYLNEALDVFKQMQVVG-CEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPD 464
            +   + EA  +  QMQ  G   PD VTY T+I+   K+  L  A  +  +M  AG +PD
Sbjct: 278 CKLGKIAEAQVILDQMQESGDVLPDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPD 337

Query: 465 TFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYR 524
             TY+ II+ L K G L+ A  L   M   GC PN+VTY  +I+   KAR    A ++  
Sbjct: 338 VVTYTTIIDGLCKCGRLEEAEYLLQGMKRAGCAPNVVTYTTLISGLCKARKVDEAERVME 397

Query: 525 DMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMR--RKNWVPDEPVYGLLVDLWGK 582
           +M+NAG  P+ VTY+ ++  L   G + EA+ +   M+  R    PD   Y  +V+    
Sbjct: 398 EMRNAGCPPNLVTYNTMVNGLCVSGRIKEAQQLVQRMKDGRAECSPDAATYRTIVNALMS 457

Query: 583 AGNVRKAWEWYEAM 596
           +  V++A +  E M
Sbjct: 458 SDLVQEAEQLLEQM 471



 Score =  120 bits (300), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 66/205 (32%), Positives = 114/205 (55%), Gaps = 3/205 (1%)

Query: 443 AGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVT 502
           AG L  A+++ ++M++AG +PD FT++ II  +  AG L  A      + + GC PN+VT
Sbjct: 3   AGDLHAALELLEEMKSAGFAPDAFTHTPIITAMANAGDLDGAMD---HLRSMGCDPNVVT 59

Query: 503 YNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMR 562
           Y  +IA  A+A+  + A+KL  +M+  G  P+ VTY+++++ L     +  A+ V  +M 
Sbjct: 60  YTALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKKMI 119

Query: 563 RKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLS 622
              + P+   +  LVD + K GNV  A +    M+  G+RPNV T ++L+    +  +  
Sbjct: 120 EGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFL 179

Query: 623 DAYHLLQGMLNLGLKPSLQTYTLLL 647
           +A  +L+ M   G+ P   TY+ L+
Sbjct: 180 EAKEVLEEMKASGVTPDAFTYSALI 204



 Score =  117 bits (292), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 70/240 (29%), Positives = 122/240 (50%), Gaps = 3/240 (1%)

Query: 408 ANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFT 467
           A  L+ AL++ ++M+  G  PD  T+  +I   A AG LD AMD  + M   G  P+  T
Sbjct: 3   AGDLHAALELLEEMKSAGFAPDAFTHTPIITAMANAGDLDGAMDHLRSM---GCDPNVVT 59

Query: 468 YSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQ 527
           Y+ +I    +A  L+ A +L  EM  +GC PNLVTYN+++    K     +A  + + M 
Sbjct: 60  YTALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKKMI 119

Query: 528 NAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVR 587
             GF P+ +T++ +++     G +D+A  +   M  K   P+   Y  L+D   K+    
Sbjct: 120 EGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFL 179

Query: 588 KAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
           +A E  E M  +G+ P+  T ++L+    +  ++ +A  +L+ M   G  P +  Y+ ++
Sbjct: 180 EAKEVLEEMKASGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSSII 239



 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 76/291 (26%), Positives = 126/291 (43%), Gaps = 3/291 (1%)

Query: 478 AGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVT 537
           AG L AA +L  EM + G  P+  T+  +I   A A +   A+   R M   G +P+ VT
Sbjct: 3   AGDLHAALELLEEMKSAGFAPDAFTHTPIITAMANAGDLDGAMDHLRSM---GCDPNVVT 59

Query: 538 YSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAML 597
           Y+ ++        L+EA  +  EMR +   P+   Y +LVD   K   V  A +  + M+
Sbjct: 60  YTALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKKMI 119

Query: 598 QAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPY 657
           + G  PNV T NSL+  F + G + DA  LL  M+  G++P++ TY+ L+    +++   
Sbjct: 120 EGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFL 179

Query: 658 DMGFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRESKRGLVDAVV 717
           +     E M  SG     F  S    G    +  +     L  M          +  +++
Sbjct: 180 EAKEVLEEMKASGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSSII 239

Query: 718 DFLHKSGLKEEAGSVWEVAAQKNVYPDAVKEKGMSYWLINLHVMSDGTAVI 768
               KSG   EA    +   ++   PD V    +   L  L  +++   ++
Sbjct: 240 HAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVIL 290


>gi|326487476|dbj|BAJ89722.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 805

 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 96/298 (32%), Positives = 149/298 (50%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           R AG + D  T +T++   GR           + +   G  P VVTYN L+  +G+A   
Sbjct: 246 RAAGVEPDGFTASTVIAAAGRDGLVDEAVAFFEDLKARGHAPCVVTYNALLQVFGKAGNY 305

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
            EAL V ++M+  GC+PD VTY  L   +A+AGF   A      M   GL P+TFTY+ I
Sbjct: 306 TEALRVLREMEDAGCKPDAVTYNELAGSYARAGFYQEAAKCIDTMIGKGLLPNTFTYNTI 365

Query: 472 INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF 531
           +   G AG +  A  LF  M   G IP   TYN+++ +  K   + + L++  +M  +G 
Sbjct: 366 MTAYGNAGKVDEALALFDRMKKNGFIPYTNTYNLVLGMLGKKSRFAAMLEMLGEMSRSGC 425

Query: 532 EPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWE 591
            P++VT++ ++ V G  G       V   M+          Y  L+  +G+ G+   A++
Sbjct: 426 TPNRVTWNTLLAVCGKRGMESYVTRVLEGMKSCKVELCRDTYNTLICAYGRCGSRANAFK 485

Query: 592 WYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSC 649
            Y+ M  AG  P + T N+LL+   R G  + A  ++  M + G KP+  +Y+LLL C
Sbjct: 486 MYDEMTAAGFAPCLTTYNALLNVLSRQGDWTAARSIVSKMKSEGFKPNDMSYSLLLQC 543



 Score =  155 bits (392), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 92/309 (29%), Positives = 151/309 (48%), Gaps = 1/309 (0%)

Query: 340 HTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYN 399
           H       + +    G + D   YTT++  L R  ++    +L D++ R+G  P  VTYN
Sbjct: 163 HDAVCALLDEMPLPPGARLDVRAYTTVLHALSREGRYERALRLFDELRREGVAPTRVTYN 222

Query: 400 RLIHSYGR-ANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQA 458
            ++  YGR        + +   M+  G EPD  T  T+I    + G +D A+  ++ ++A
Sbjct: 223 VVLDVYGRMGRSWPRVVALLADMRAAGVEPDGFTASTVIAAAGRDGLVDEAVAFFEDLKA 282

Query: 459 AGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQS 518
            G +P   TY+ ++   GKAG+   A ++  EM + GC P+ VTYN +    A+A  YQ 
Sbjct: 283 RGHAPCVVTYNALLQVFGKAGNYTEALRVLREMEDAGCKPDAVTYNELAGSYARAGFYQE 342

Query: 519 ALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVD 578
           A K    M   G  P+  TY+ +M   G+ G +DEA A+F  M++  ++P    Y L++ 
Sbjct: 343 AAKCIDTMIGKGLLPNTFTYNTIMTAYGNAGKVDEALALFDRMKKNGFIPYTNTYNLVLG 402

Query: 579 LWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKP 638
           + GK        E    M ++G  PN  T N+LL+   + G  S    +L+GM +  ++ 
Sbjct: 403 MLGKKSRFAAMLEMLGEMSRSGCTPNRVTWNTLLAVCGKRGMESYVTRVLEGMKSCKVEL 462

Query: 639 SLQTYTLLL 647
              TY  L+
Sbjct: 463 CRDTYNTLI 471



 Score =  145 bits (367), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 91/310 (29%), Positives = 152/310 (49%), Gaps = 3/310 (0%)

Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQM-VRDGCQPNVVTYNRL 401
           AL    W R + G       +  +V  LGR  +  A+  LLD+M +  G + +V  Y  +
Sbjct: 131 ALALLRWARAE-GAADGPAPFEMVVRALGREGRHDAVCALLDEMPLPPGARLDVRAYTTV 189

Query: 402 IHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAG-FLDVAMDMYKKMQAAG 460
           +H+  R      AL +F +++  G  P RVTY  ++D++ + G      + +   M+AAG
Sbjct: 190 LHALSREGRYERALRLFDELRREGVAPTRVTYNVVLDVYGRMGRSWPRVVALLADMRAAG 249

Query: 461 LSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSAL 520
           + PD FT S +I   G+ G +  A   F ++  +G  P +VTYN ++ +  KA NY  AL
Sbjct: 250 VEPDGFTASTVIAAAGRDGLVDEAVAFFEDLKARGHAPCVVTYNALLQVFGKAGNYTEAL 309

Query: 521 KLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLW 580
           ++ R+M++AG +PD VTY+ +       G+  EA      M  K  +P+   Y  ++  +
Sbjct: 310 RVLREMEDAGCKPDAVTYNELAGSYARAGFYQEAAKCIDTMIGKGLLPNTFTYNTIMTAY 369

Query: 581 GKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSL 640
           G AG V +A   ++ M + G  P   T N +L    +  + +    +L  M   G  P+ 
Sbjct: 370 GNAGKVDEALALFDRMKKNGFIPYTNTYNLVLGMLGKKSRFAAMLEMLGEMSRSGCTPNR 429

Query: 641 QTYTLLLSCC 650
            T+  LL+ C
Sbjct: 430 VTWNTLLAVC 439



 Score =  142 bits (359), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 106/409 (25%), Positives = 176/409 (43%), Gaps = 80/409 (19%)

Query: 326 DAYQANQVLKQ-----LQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAIN 380
           D + A+ V+       L D  VA  FF  L+ + G      TY  ++ + G+A  +    
Sbjct: 253 DGFTASTVIAAAGRDGLVDEAVA--FFEDLKAR-GHAPCVVTYNALLQVFGKAGNYTEAL 309

Query: 381 KLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIH 440
           ++L +M   GC+P+ VTYN L  SY RA +  EA      M   G  P+  TY T++  +
Sbjct: 310 RVLREMEDAGCKPDAVTYNELAGSYARAGFYQEAAKCIDTMIGKGLLPNTFTYNTIMTAY 369

Query: 441 AKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNL 500
             AG +D A+ ++ +M+  G  P T TY++++  LGK     A  ++  EM   GC PN 
Sbjct: 370 GNAGKVDEALALFDRMKKNGFIPYTNTYNLVLGMLGKKSRFAAMLEMLGEMSRSGCTPNR 429

Query: 501 VTYNIMIALQAKARNYQS------------------------------------ALKLYR 524
           VT+N ++A+  K R  +S                                    A K+Y 
Sbjct: 430 VTWNTLLAVCGK-RGMESYVTRVLEGMKSCKVELCRDTYNTLICAYGRCGSRANAFKMYD 488

Query: 525 DMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKA- 583
           +M  AGF P   TY+ ++ VL   G    A ++ ++M+ + + P++  Y LL+    K  
Sbjct: 489 EMTAAGFAPCLTTYNALLNVLSRQGDWTAARSIVSKMKSEGFKPNDMSYSLLLQCHAKGG 548

Query: 584 --------------GNVRKAWEWYEAMLQA--------------------GLRPNVPTCN 609
                         GN+  +W     ++ A                    G +P++   N
Sbjct: 549 NAAGIEAIEKEVYQGNIFPSWVILRTLVIANFKCRRLEGIERAFQEVKARGHKPDLVILN 608

Query: 610 SLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYD 658
           S+LS + + G  S A  + + +  LGL P L TY  L+    ++  P++
Sbjct: 609 SMLSIYAKNGLYSKAMEMFESIEQLGLSPDLITYNSLMDMYAKSNEPWE 657



 Score =  137 bits (345), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 90/331 (27%), Positives = 160/331 (48%), Gaps = 21/331 (6%)

Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLI 402
           AL  F+ +++  GF    +TY  ++G+LG+  +F A+ ++L +M R GC PN VT+N L+
Sbjct: 378 ALALFDRMKKN-GFIPYTNTYNLVLGMLGKKSRFAAMLEMLGEMSRSGCTPNRVTWNTLL 436

Query: 403 HSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLS 462
              G+    +    V + M+    E  R TY TLI  + + G    A  MY +M AAG +
Sbjct: 437 AVCGKRGMESYVTRVLEGMKSCKVELCRDTYNTLICAYGRCGSRANAFKMYDEMTAAGFA 496

Query: 463 PDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKL 522
           P   TY+ ++N L + G   AA  +  +M ++G  PN ++Y++++   AK  N      +
Sbjct: 497 PCLTTYNALLNVLSRQGDWTAARSIVSKMKSEGFKPNDMSYSLLLQCHAKGGNAAGIEAI 556

Query: 523 YRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGK 582
            +++      P  V    ++     C  L+  E  F E++ +   PD  +   ++ ++ K
Sbjct: 557 EKEVYQGNIFPSWVILRTLVIANFKCRRLEGIERAFQEVKARGHKPDLVILNSMLSIYAK 616

Query: 583 AGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGM---------LN 633
            G   KA E +E++ Q GL P++ T NSL+  + +  +  +A  +L  +           
Sbjct: 617 NGLYSKAMEMFESIEQLGLSPDLITYNSLMDMYAKSNEPWEAEKILNRLRSSQSQQQQQQ 676

Query: 634 LGLKPSLQTYTLLLSCCTEARSPYDMGFCHE 664
             LKP + +Y  +++           GFC E
Sbjct: 677 QQLKPDVVSYNTVIN-----------GFCKE 696



 Score = 80.9 bits (198), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 47/214 (21%), Positives = 105/214 (49%), Gaps = 9/214 (4%)

Query: 372 RARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRV 431
           + R+   I +   ++   G +P++V  N ++  Y +    ++A+++F+ ++ +G  PD +
Sbjct: 581 KCRRLEGIERAFQEVKARGHKPDLVILNSMLSIYAKNGLYSKAMEMFESIEQLGLSPDLI 640

Query: 432 TYCTLIDIHAKAGFLDVAMDMYKKMQAAG---------LSPDTFTYSVIINCLGKAGHLQ 482
           TY +L+D++AK+     A  +  +++++          L PD  +Y+ +IN   K G ++
Sbjct: 641 TYNSLMDMYAKSNEPWEAEKILNRLRSSQSQQQQQQQQLKPDVVSYNTVINGFCKEGLIK 700

Query: 483 AAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVM 542
            A ++  EM+  G  P ++TY+ ++   A    +  A ++   M     +P ++TY  V+
Sbjct: 701 EAQRVLSEMIADGVAPCVITYHTLVGGYASREMFAEAREVVGYMIQRKLKPMELTYRRVV 760

Query: 543 EVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLL 576
           +        ++A    A +   +   DE + G L
Sbjct: 761 DSYCRAKRYEDARDFLAVVAEADTNSDEKLLGAL 794



 Score = 80.9 bits (198), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 56/214 (26%), Positives = 104/214 (48%), Gaps = 2/214 (0%)

Query: 435 TLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEM-VN 493
           +L+     +G  + A+ + +  +A G +     + +++  LG+ G   A   L  EM + 
Sbjct: 117 SLLKALELSGHWEWALALLRWARAEGAADGPAPFEMVVRALGREGRHDAVCALLDEMPLP 176

Query: 494 QGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGY-LD 552
            G   ++  Y  ++   ++   Y+ AL+L+ +++  G  P +VTY++V++V G  G    
Sbjct: 177 PGARLDVRAYTTVLHALSREGRYERALRLFDELRREGVAPTRVTYNVVLDVYGRMGRSWP 236

Query: 553 EAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLL 612
              A+ A+MR     PD      ++   G+ G V +A  ++E +   G  P V T N+LL
Sbjct: 237 RVVALLADMRAAGVEPDGFTASTVIAAAGRDGLVDEAVAFFEDLKARGHAPCVVTYNALL 296

Query: 613 SAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLL 646
             F + G  ++A  +L+ M + G KP   TY  L
Sbjct: 297 QVFGKAGNYTEALRVLREMEDAGCKPDAVTYNEL 330



 Score = 73.9 bits (180), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 60/276 (21%), Positives = 122/276 (44%), Gaps = 10/276 (3%)

Query: 333 VLKQLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQ 392
           VL +  D T A    + ++ + GFK ++ +Y+ ++    +      I  +  ++ +    
Sbjct: 508 VLSRQGDWTAARSIVSKMKSE-GFKPNDMSYSLLLQCHAKGGNAAGIEAIEKEVYQGNIF 566

Query: 393 PNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDM 452
           P+ V    L+ +  +   L      F++++  G +PD V   +++ I+AK G    AM+M
Sbjct: 567 PSWVILRTLVIANFKCRRLEGIERAFQEVKARGHKPDLVILNSMLSIYAKNGLYSKAMEM 626

Query: 453 YKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEM---------VNQGCIPNLVTY 503
           ++ ++  GLSPD  TY+ +++   K+     A ++   +           Q   P++V+Y
Sbjct: 627 FESIEQLGLSPDLITYNSLMDMYAKSNEPWEAEKILNRLRSSQSQQQQQQQQLKPDVVSY 686

Query: 504 NIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRR 563
           N +I    K    + A ++  +M   G  P  +TY  ++          EA  V   M +
Sbjct: 687 NTVINGFCKEGLIKEAQRVLSEMIADGVAPCVITYHTLVGGYASREMFAEAREVVGYMIQ 746

Query: 564 KNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQA 599
           +   P E  Y  +VD + +A     A ++   + +A
Sbjct: 747 RKLKPMELTYRRVVDSYCRAKRYEDARDFLAVVAEA 782



 Score = 43.9 bits (102), Expect = 0.39,   Method: Compositional matrix adjust.
 Identities = 27/109 (24%), Positives = 48/109 (44%)

Query: 356 FKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEAL 415
            K D  +Y T++    +        ++L +M+ DG  P V+TY+ L+  Y       EA 
Sbjct: 679 LKPDVVSYNTVINGFCKEGLIKEAQRVLSEMIADGVAPCVITYHTLVGGYASREMFAEAR 738

Query: 416 DVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPD 464
           +V   M     +P  +TY  ++D + +A   + A D    +  A  + D
Sbjct: 739 EVVGYMIQRKLKPMELTYRRVVDSYCRAKRYEDARDFLAVVAEADTNSD 787


>gi|449467657|ref|XP_004151539.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g16010-like [Cucumis sativus]
          Length = 637

 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 113/401 (28%), Positives = 190/401 (47%), Gaps = 7/401 (1%)

Query: 254 SNLQPSDAKVVECVSE-----RFSKPSREMKIPAGLAPFSRHFASTGNVVESVSRILRQW 308
           S+L P   ++ +  +E     R S PS E    +      R   S   + E   RIL+ +
Sbjct: 13  SSLHPLSTRIKQTENEIVQMFRVSTPSPEASNFSFNRKVLRRDPSVRTLDERFIRILKIF 72

Query: 309 KWGPLAEEALGNTNYSMDAYQANQVLKQLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVG 368
           KWG  AE+A+      +D    +QVL    +    + FF W  ++  F+HD  TY  ++ 
Sbjct: 73  KWGSDAEKAIEVLKLKVDHRLVHQVLDIDVEIRAKIQFFKWAGKRQHFQHDSTTYMALIR 132

Query: 369 ILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEP 428
            L  +     + + +  M+R  C      ++ ++   G+A  +N+AL VF Q++   C P
Sbjct: 133 CLEESGLVDEMWRTIQDMIRSPCSVGPAEWSEILKILGKAKMVNKALSVFYQIKGRKCNP 192

Query: 429 DRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAG-LSPDTFTYSVIINCLGKAGHLQAAHQL 487
               Y TLI +    G  +   ++Y ++ + G  SPDT TYS +I+  GK      A +L
Sbjct: 193 TATVYNTLILMLMHEGHHEKIHELYNEICSEGNCSPDTITYSALISAFGKLERYDFAFRL 252

Query: 488 FCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGH 547
           F EM   G  P    Y  ++A+  K    ++AL+L  +M+  G  P   TY+ +++ LG 
Sbjct: 253 FDEMKENGLHPTEKIYTTILAMYFKLNKVEAALRLVEEMKGKGCAPTVFTYTELIKGLGK 312

Query: 548 CGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPT 607
            G +D+A ++F  M +    PD  +   L+++ G+AG +  A + +  M      PNV T
Sbjct: 313 VGRVDDAYSLFFNMLKDGCKPDVVLINNLINILGRAGRLEDALKLFGKMDSLQCAPNVVT 372

Query: 608 CNSLLSA-FLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
            N+++ A F      S+A    + M   G+ PS  TY +L+
Sbjct: 373 YNTVIKAIFESKAPASEAALWFEKMKANGIAPSSFTYAILI 413



 Score =  147 bits (370), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 89/295 (30%), Positives = 158/295 (53%), Gaps = 5/295 (1%)

Query: 362 TYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQM 421
           TYT ++  LG+  +      L   M++DGC+P+VV  N LI+  GRA  L +AL +F +M
Sbjct: 302 TYTELIKGLGKVGRVDDAYSLFFNMLKDGCKPDVVLINNLINILGRAGRLEDALKLFGKM 361

Query: 422 QVVGCEPDRVTYCTLID--IHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAG 479
             + C P+ VTY T+I     +KA   + A+  ++KM+A G++P +FTY+++I+   K  
Sbjct: 362 DSLQCAPNVVTYNTVIKAIFESKAPASEAAL-WFEKMKANGIAPSSFTYAILIDGFCKTN 420

Query: 480 HLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDM-QNAGFEPDKVTY 538
            ++ A  L  EM  +G  P    Y  +I    +A+ Y++A +L++++ +N G    +V Y
Sbjct: 421 RVEKALLLLEEMDEKGFPPCPAAYCSLIDSLGRAKRYEAANELFQELKENCGRSSARV-Y 479

Query: 539 SIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQ 598
           +++++  G+CG L +A  +F EM++    PD   Y  L+    +AG + +A      M +
Sbjct: 480 AVMIKHFGNCGRLSDAVDLFCEMKKLGCSPDVYTYNALMSGMIRAGMIDEAHSLMRNMRE 539

Query: 599 AGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEA 653
            G  P++ + N +L+   + G    A  +   M    + P   +Y  +LSC + A
Sbjct: 540 NGCTPDIKSHNIILNGLAKTGGPKRAIEMFTKMKESEIMPDAVSYNTILSCLSRA 594



 Score =  142 bits (357), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 88/305 (28%), Positives = 147/305 (48%), Gaps = 3/305 (0%)

Query: 346 FFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSY 405
            +N +  +     D  TY+ ++   G+  ++    +L D+M  +G  P    Y  ++  Y
Sbjct: 216 LYNEICSEGNCSPDTITYSALISAFGKLERYDFAFRLFDEMKENGLHPTEKIYTTILAMY 275

Query: 406 GRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDT 465
            + N +  AL + ++M+  GC P   TY  LI    K G +D A  ++  M   G  PD 
Sbjct: 276 FKLNKVEAALRLVEEMKGKGCAPTVFTYTELIKGLGKVGRVDDAYSLFFNMLKDGCKPDV 335

Query: 466 FTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIA--LQAKARNYQSALKLY 523
              + +IN LG+AG L+ A +LF +M +  C PN+VTYN +I    ++KA   ++AL  +
Sbjct: 336 VLINNLINILGRAGRLEDALKLFGKMDSLQCAPNVVTYNTVIKAIFESKAPASEAAL-WF 394

Query: 524 RDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKA 583
             M+  G  P   TY+I+++       +++A  +  EM  K + P    Y  L+D  G+A
Sbjct: 395 EKMKANGIAPSSFTYAILIDGFCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLIDSLGRA 454

Query: 584 GNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTY 643
                A E ++ + +   R +      ++  F   G+LSDA  L   M  LG  P + TY
Sbjct: 455 KRYEAANELFQELKENCGRSSARVYAVMIKHFGNCGRLSDAVDLFCEMKKLGCSPDVYTY 514

Query: 644 TLLLS 648
             L+S
Sbjct: 515 NALMS 519



 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 88/303 (29%), Positives = 145/303 (47%), Gaps = 3/303 (0%)

Query: 346 FFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSY 405
           FFN L+   G K D      ++ ILGRA +     KL  +M    C PNVVTYN +I + 
Sbjct: 323 FFNMLKD--GCKPDVVLINNLINILGRAGRLEDALKLFGKMDSLQCAPNVVTYNTVIKAI 380

Query: 406 GRANY-LNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPD 464
             +    +EA   F++M+  G  P   TY  LID   K   ++ A+ + ++M   G  P 
Sbjct: 381 FESKAPASEAALWFEKMKANGIAPSSFTYAILIDGFCKTNRVEKALLLLEEMDEKGFPPC 440

Query: 465 TFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYR 524
              Y  +I+ LG+A   +AA++LF E+       +   Y +MI           A+ L+ 
Sbjct: 441 PAAYCSLIDSLGRAKRYEAANELFQELKENCGRSSARVYAVMIKHFGNCGRLSDAVDLFC 500

Query: 525 DMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAG 584
           +M+  G  PD  TY+ +M  +   G +DEA ++   MR     PD   + ++++   K G
Sbjct: 501 EMKKLGCSPDVYTYNALMSGMIRAGMIDEAHSLMRNMRENGCTPDIKSHNIILNGLAKTG 560

Query: 585 NVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYT 644
             ++A E +  M ++ + P+  + N++LS   R G    A  L++ M   G +    TY+
Sbjct: 561 GPKRAIEMFTKMKESEIMPDAVSYNTILSCLSRAGMFEMAAKLMREMKLKGFEYDSITYS 620

Query: 645 LLL 647
            +L
Sbjct: 621 SIL 623



 Score =  123 bits (309), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 60/194 (30%), Positives = 114/194 (58%)

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
           + GF      Y +++  LGRA+++ A N+L  ++  +  + +   Y  +I  +G    L+
Sbjct: 434 EKGFPPCPAAYCSLIDSLGRAKRYEAANELFQELKENCGRSSARVYAVMIKHFGNCGRLS 493

Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
           +A+D+F +M+ +GC PD  TY  L+    +AG +D A  + + M+  G +PD  ++++I+
Sbjct: 494 DAVDLFCEMKKLGCSPDVYTYNALMSGMIRAGMIDEAHSLMRNMRENGCTPDIKSHNIIL 553

Query: 473 NCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFE 532
           N L K G  + A ++F +M     +P+ V+YN +++  ++A  ++ A KL R+M+  GFE
Sbjct: 554 NGLAKTGGPKRAIEMFTKMKESEIMPDAVSYNTILSCLSRAGMFEMAAKLMREMKLKGFE 613

Query: 533 PDKVTYSIVMEVLG 546
            D +TYS ++E +G
Sbjct: 614 YDSITYSSILEAVG 627



 Score = 68.6 bits (166), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 32/126 (25%), Positives = 68/126 (53%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           ++ G   D +TY  ++  + RA      + L+  M  +GC P++ ++N +++   +    
Sbjct: 503 KKLGCSPDVYTYNALMSGMIRAGMIDEAHSLMRNMRENGCTPDIKSHNIILNGLAKTGGP 562

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
             A+++F +M+     PD V+Y T++   ++AG  ++A  + ++M+  G   D+ TYS I
Sbjct: 563 KRAIEMFTKMKESEIMPDAVSYNTILSCLSRAGMFEMAAKLMREMKLKGFEYDSITYSSI 622

Query: 472 INCLGK 477
           +  +GK
Sbjct: 623 LEAVGK 628


>gi|255551759|ref|XP_002516925.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223544013|gb|EEF45539.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 901

 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 101/355 (28%), Positives = 171/355 (48%), Gaps = 37/355 (10%)

Query: 334 LKQLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQP 393
           L  +Q+  + L  F+ ++ + G++   H +TT++ +  R  +  A   LLD+M  +    
Sbjct: 208 LSSVQESDIMLTLFHQMQ-ELGYEVSVHLFTTVIRVFAREGRLDAALSLLDEMKSNCLHA 266

Query: 394 NVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMY 453
           ++V YN  I  +G+A  ++ A   F +++  G  PD VTY ++I +  K   LD A++++
Sbjct: 267 DIVLYNVCIDCFGKAGKVDMAWKFFHEIKSHGLLPDDVTYTSMIGVLCKGNRLDEAVEIF 326

Query: 454 KKMQ-----------------------------------AAGLSPDTFTYSVIINCLGKA 478
           ++M+                                   A G  P    Y+ I+ CLGK 
Sbjct: 327 EQMEQNRNVPCAYAYNTMIMGYGSAGKFDEAYSLLERQKARGCIPSVIAYNCILTCLGKK 386

Query: 479 GHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTY 538
           G L  A + F EM  +   PNL TYN++I +  KA   ++A K+   M+ AG  P+ +T 
Sbjct: 387 GRLGEALRTFEEM-KKDAAPNLSTYNVLIDMLCKAGEVEAAFKVRDAMKEAGLFPNVMTV 445

Query: 539 SIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQ 598
           +I+++ L     LDEA ++F  M  K   PDE  +  L+D  GK G V  A+  YE ML 
Sbjct: 446 NIMIDRLCKAKKLDEACSIFEGMNHKICSPDEVTFCSLIDGLGKQGRVDDAYRLYEQMLD 505

Query: 599 AGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEA 653
           +   PN     SL+ +F + G+  D + + + M++ G  P L+     + C  +A
Sbjct: 506 SDKIPNAVVYTSLIKSFFKCGRKEDGHKIFKEMIHRGCSPDLRLLNAYMDCVFKA 560



 Score =  159 bits (403), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 99/350 (28%), Positives = 167/350 (47%), Gaps = 36/350 (10%)

Query: 362 TYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQM 421
           TY  ++ +L +A +  A  K+ D M   G  PNV+T N +I    +A  L+EA  +F+ M
Sbjct: 409 TYNVLIDMLCKAGEVEAAFKVRDAMKEAGLFPNVMTVNIMIDRLCKAKKLDEACSIFEGM 468

Query: 422 QVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHL 481
               C PD VT+C+LID   K G +D A  +Y++M  +   P+   Y+ +I    K G  
Sbjct: 469 NHKICSPDEVTFCSLIDGLGKQGRVDDAYRLYEQMLDSDKIPNAVVYTSLIKSFFKCGRK 528

Query: 482 QAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIV 541
           +  H++F EM+++GC P+L   N  +    KA        L+ ++++ GF PD ++YSI+
Sbjct: 529 EDGHKIFKEMIHRGCSPDLRLLNAYMDCVFKAGETGKGRALFEEIKSRGFIPDVMSYSIL 588

Query: 542 MEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGL 601
           +  L   G+  E   +F  M+ +  V D   Y   +D + K+G V KA++  E M   G 
Sbjct: 589 IHGLVKAGFARETYELFYAMKEQGCVLDTHAYNTFIDGFCKSGKVNKAYQLLEEMKTKGR 648

Query: 602 RP-----------------------------------NVPTCNSLLSAFLRVGQLSDAYH 626
           +P                                   NV   +SL+  F +VG++ +AY 
Sbjct: 649 QPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGLELNVVIYSSLIDGFGKVGRIDEAYL 708

Query: 627 LLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGFCHELMA-VSGHPAHM 675
           +++ ++  GL P++ T+  LL    +A    +   C + M  + G P H+
Sbjct: 709 IMEELMQKGLTPNVYTWNCLLDALVKAEEINEALVCFQNMKNLKGTPNHI 758



 Score =  155 bits (393), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 90/290 (31%), Positives = 150/290 (51%)

Query: 359 DEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVF 418
           DE T+ +++  LG+  +     +L +QM+     PN V Y  LI S+ +     +   +F
Sbjct: 476 DEVTFCSLIDGLGKQGRVDDAYRLYEQMLDSDKIPNAVVYTSLIKSFFKCGRKEDGHKIF 535

Query: 419 KQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKA 478
           K+M   GC PD       +D   KAG       +++++++ G  PD  +YS++I+ L KA
Sbjct: 536 KEMIHRGCSPDLRLLNAYMDCVFKAGETGKGRALFEEIKSRGFIPDVMSYSILIHGLVKA 595

Query: 479 GHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTY 538
           G  +  ++LF  M  QGC+ +   YN  I    K+     A +L  +M+  G +P  VTY
Sbjct: 596 GFARETYELFYAMKEQGCVLDTHAYNTFIDGFCKSGKVNKAYQLLEEMKTKGRQPTVVTY 655

Query: 539 SIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQ 598
             V++ L     LDEA  +F E +      +  +Y  L+D +GK G + +A+   E ++Q
Sbjct: 656 GSVIDGLAKIDRLDEAYMLFEEAKSNGLELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQ 715

Query: 599 AGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
            GL PNV T N LL A ++  ++++A    Q M NL   P+  TY++L++
Sbjct: 716 KGLTPNVYTWNCLLDALVKAEEINEALVCFQNMKNLKGTPNHITYSILIN 765



 Score =  152 bits (384), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 132/531 (24%), Positives = 219/531 (41%), Gaps = 78/531 (14%)

Query: 297 VVESVSRILRQWKWGPLAEEALGNTNYSMDAYQANQVLKQLQDHTVALGFFNWLRRQAGF 356
           VV+ V +IL    WGP  E AL     S        VL++ +D   A+ +F W  R+   
Sbjct: 65  VVDDVCKILESGNWGPDVENALSLFVESPKTDLVIGVLRRAKDVNQAISYFRWTERKTDQ 124

Query: 357 KHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALD 416
                 Y +++ ++ +  +F    ++L +M   G  P+  T   LI S  ++N L E  D
Sbjct: 125 ALCPEAYDSLLLVMAKNVKFDYFEQILGEMSIAGFGPSTKTCIELILSCIKSNKLREGFD 184

Query: 417 -----------------------------------VFKQMQVVGCEPDRVTYCTLIDIHA 441
                                              +F QMQ +G E     + T+I + A
Sbjct: 185 LIQCMRKFKFRPAFSAYTTLIGALSSVQESDIMLTLFHQMQELGYEVSVHLFTTVIRVFA 244

Query: 442 KAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLV 501
           + G LD A+ +  +M++  L  D   Y+V I+C GKAG +  A + F E+ + G +P+ V
Sbjct: 245 REGRLDAALSLLDEMKSNCLHADIVLYNVCIDCFGKAGKVDMAWKFFHEIKSHGLLPDDV 304

Query: 502 TYNIMIALQAKARNYQSALKLYRDMQN--------------------------------- 528
           TY  MI +  K      A++++  M+                                  
Sbjct: 305 TYTSMIGVLCKGNRLDEAVEIFEQMEQNRNVPCAYAYNTMIMGYGSAGKFDEAYSLLERQ 364

Query: 529 --AGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNV 586
              G  P  + Y+ ++  LG  G L EA   F EM +K+  P+   Y +L+D+  KAG V
Sbjct: 365 KARGCIPSVIAYNCILTCLGKKGRLGEALRTFEEM-KKDAAPNLSTYNVLIDMLCKAGEV 423

Query: 587 RKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLL 646
             A++  +AM +AGL PNV T N ++    +  +L +A  + +GM +    P   T+  L
Sbjct: 424 EAAFKVRDAMKEAGLFPNVMTVNIMIDRLCKAKKLDEACSIFEGMNHKICSPDEVTFCSL 483

Query: 647 LSCCTEARSPYDMGFCHELMAVSGH-PAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSED 705
           +    +     D    +E M  S   P  +   S+           D    F EM+H   
Sbjct: 484 IDGLGKQGRVDDAYRLYEQMLDSDKIPNAVVYTSLIKSFFKCGRKEDGHKIFKEMIHRGC 543

Query: 706 RESKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAVKEKGMSYWLI 756
               R L++A +D + K+G   +  +++E    +   PD      MSY ++
Sbjct: 544 SPDLR-LLNAYMDCVFKAGETGKGRALFEEIKSRGFIPDV-----MSYSIL 588



 Score =  149 bits (375), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 99/400 (24%), Positives = 194/400 (48%), Gaps = 12/400 (3%)

Query: 342 VALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRL 401
           +A  FF+ ++   G   D+ TYT+M+G+L +  +     ++ +QM ++   P    YN +
Sbjct: 286 MAWKFFHEIKSH-GLLPDDVTYTSMIGVLCKGNRLDEAVEIFEQMEQNRNVPCAYAYNTM 344

Query: 402 IHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGL 461
           I  YG A   +EA  + ++ +  GC P  + Y  ++    K G L  A+  +++M+    
Sbjct: 345 IMGYGSAGKFDEAYSLLERQKARGCIPSVIAYNCILTCLGKKGRLGEALRTFEEMKKDA- 403

Query: 462 SPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALK 521
           +P+  TY+V+I+ L KAG ++AA ++   M   G  PN++T NIMI    KA+    A  
Sbjct: 404 APNLSTYNVLIDMLCKAGEVEAAFKVRDAMKEAGLFPNVMTVNIMIDRLCKAKKLDEACS 463

Query: 522 LYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWG 581
           ++  M +    PD+VT+  +++ LG  G +D+A  ++ +M   + +P+  VY  L+  + 
Sbjct: 464 IFEGMNHKICSPDEVTFCSLIDGLGKQGRVDDAYRLYEQMLDSDKIPNAVVYTSLIKSFF 523

Query: 582 KAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQ 641
           K G      + ++ M+  G  P++   N+ +    + G+      L + + + G  P + 
Sbjct: 524 KCGRKEDGHKIFKEMIHRGCSPDLRLLNAYMDCVFKAGETGKGRALFEEIKSRGFIPDVM 583

Query: 642 TYTLLLSCCTE---ARSPYDMGFC--HELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGS 696
           +Y++L+    +   AR  Y++ +    +   +  H  + F+      G   +  +     
Sbjct: 584 SYSILIHGLVKAGFARETYELFYAMKEQGCVLDTHAYNTFIDGFCKSGKVNKAYQ----- 638

Query: 697 FLEMMHSEDRESKRGLVDAVVDFLHKSGLKEEAGSVWEVA 736
            LE M ++ R+       +V+D L K    +EA  ++E A
Sbjct: 639 LLEEMKTKGRQPTVVTYGSVIDGLAKIDRLDEAYMLFEEA 678



 Score =  132 bits (333), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 73/264 (27%), Positives = 134/264 (50%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           ++ G   D H Y T +    ++ +     +LL++M   G QP VVTY  +I    + + L
Sbjct: 609 KEQGCVLDTHAYNTFIDGFCKSGKVNKAYQLLEEMKTKGRQPTVVTYGSVIDGLAKIDRL 668

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
           +EA  +F++ +  G E + V Y +LID   K G +D A  + +++   GL+P+ +T++ +
Sbjct: 669 DEAYMLFEEAKSNGLELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCL 728

Query: 472 INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF 531
           ++ L KA  +  A   F  M N    PN +TY+I+I    + R +  A   +++MQ  G 
Sbjct: 729 LDALVKAEEINEALVCFQNMKNLKGTPNHITYSILINGLCRVRKFNKAFVFWQEMQKQGL 788

Query: 532 EPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWE 591
           +P+ +TY+ ++  L   G + EA ++F   +    VPD   Y  +++    +    +A++
Sbjct: 789 KPNTITYTTMIAGLAKAGNIAEASSLFERFKANGGVPDSASYNAIIEGLSYSRRAMEAYK 848

Query: 592 WYEAMLQAGLRPNVPTCNSLLSAF 615
            +E     G   +  TC +LL A 
Sbjct: 849 IFEETRMKGCNIHTKTCIALLDAL 872



 Score =  119 bits (299), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 71/278 (25%), Positives = 139/278 (50%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           +  GF  D  +Y+ ++  L +A       +L   M   GC  +   YN  I  + ++  +
Sbjct: 574 KSRGFIPDVMSYSILIHGLVKAGFARETYELFYAMKEQGCVLDTHAYNTFIDGFCKSGKV 633

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
           N+A  + ++M+  G +P  VTY ++ID  AK   LD A  ++++ ++ GL  +   YS +
Sbjct: 634 NKAYQLLEEMKTKGRQPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGLELNVVIYSSL 693

Query: 472 INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF 531
           I+  GK G +  A+ +  E++ +G  PN+ T+N ++    KA     AL  +++M+N   
Sbjct: 694 IDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEINEALVCFQNMKNLKG 753

Query: 532 EPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWE 591
            P+ +TYSI++  L      ++A   + EM+++   P+   Y  ++    KAGN+ +A  
Sbjct: 754 TPNHITYSILINGLCRVRKFNKAFVFWQEMQKQGLKPNTITYTTMIAGLAKAGNIAEASS 813

Query: 592 WYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQ 629
            +E     G  P+  + N+++       +  +AY + +
Sbjct: 814 LFERFKANGGVPDSASYNAIIEGLSYSRRAMEAYKIFE 851



 Score =  116 bits (290), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 70/283 (24%), Positives = 135/283 (47%)

Query: 372 RARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRV 431
           +A + G    L +++   G  P+V++Y+ LIH   +A +  E  ++F  M+  GC  D  
Sbjct: 559 KAGETGKGRALFEEIKSRGFIPDVMSYSILIHGLVKAGFARETYELFYAMKEQGCVLDTH 618

Query: 432 TYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEM 491
            Y T ID   K+G ++ A  + ++M+  G  P   TY  +I+ L K   L  A+ LF E 
Sbjct: 619 AYNTFIDGFCKSGKVNKAYQLLEEMKTKGRQPTVVTYGSVIDGLAKIDRLDEAYMLFEEA 678

Query: 492 VNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYL 551
            + G   N+V Y+ +I    K      A  +  ++   G  P+  T++ +++ L     +
Sbjct: 679 KSNGLELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEI 738

Query: 552 DEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSL 611
           +EA   F  M+     P+   Y +L++   +     KA+ +++ M + GL+PN  T  ++
Sbjct: 739 NEALVCFQNMKNLKGTPNHITYSILINGLCRVRKFNKAFVFWQEMQKQGLKPNTITYTTM 798

Query: 612 LSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEAR 654
           ++   + G +++A  L +     G  P   +Y  ++   + +R
Sbjct: 799 IAGLAKAGNIAEASSLFERFKANGGVPDSASYNAIIEGLSYSR 841



 Score = 92.0 bits (227), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 55/209 (26%), Positives = 107/209 (51%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           G + +   Y++++   G+  +      +++++++ G  PNV T+N L+ +  +A  +NEA
Sbjct: 682 GLELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEINEA 741

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
           L  F+ M+ +   P+ +TY  LI+   +    + A   +++MQ  GL P+T TY+ +I  
Sbjct: 742 LVCFQNMKNLKGTPNHITYSILINGLCRVRKFNKAFVFWQEMQKQGLKPNTITYTTMIAG 801

Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPD 534
           L KAG++  A  LF      G +P+  +YN +I   + +R    A K++ + +  G    
Sbjct: 802 LAKAGNIAEASSLFERFKANGGVPDSASYNAIIEGLSYSRRAMEAYKIFEETRMKGCNIH 861

Query: 535 KVTYSIVMEVLGHCGYLDEAEAVFAEMRR 563
             T   +++ L     L++A  V A +R 
Sbjct: 862 TKTCIALLDALQKDECLEQAAIVGAVLRE 890



 Score = 45.1 bits (105), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 30/116 (25%), Positives = 55/116 (47%), Gaps = 1/116 (0%)

Query: 334 LKQLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQP 393
           L +++    A  F+  +++Q G K +  TYTTM+  L +A      + L ++   +G  P
Sbjct: 767 LCRVRKFNKAFVFWQEMQKQ-GLKPNTITYTTMIAGLAKAGNIAEASSLFERFKANGGVP 825

Query: 394 NVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVA 449
           +  +YN +I     +    EA  +F++ ++ GC     T   L+D   K   L+ A
Sbjct: 826 DSASYNAIIEGLSYSRRAMEAYKIFEETRMKGCNIHTKTCIALLDALQKDECLEQA 881


>gi|357481045|ref|XP_003610808.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355512143|gb|AES93766.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 1084

 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 98/326 (30%), Positives = 161/326 (49%), Gaps = 18/326 (5%)

Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLI 402
           A   F  ++R  G     +TYT ++    +A       K  D+M+  GC PNVVTY  LI
Sbjct: 479 AFSLFEEMKRN-GIVPSVYTYTILIDSFCKAGLIQQARKWFDEMLHKGCTPNVVTYTALI 537

Query: 403 HSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLS 462
           H+Y +A  +  A ++F+ M + GC+P+ VTY  LID H KAG ++ A  +Y +M+    S
Sbjct: 538 HAYLKAKQMPVADELFEMMLLEGCKPNVVTYTALIDGHCKAGQIEKACQIYARMRGDIES 597

Query: 463 ----------------PDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIM 506
                           P+  TY  +++ L KA  ++ AH+L   M+  GC PN + Y+ +
Sbjct: 598 SDMDKYFKLDHNNCEGPNVITYGALVDGLCKANRVKEAHELLDTMLAHGCEPNQIVYDAV 657

Query: 507 IALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNW 566
           I    K    Q A +++  M   G+ P+  TYS  ++ L     LD    V ++M   + 
Sbjct: 658 IDGFCKIGKLQDAQEVFTKMSERGYSPNLYTYSSFIDCLFKDNRLDLVLKVLSKMLENSC 717

Query: 567 VPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYH 626
            P+  +Y  +VD   K G   +A++    M + G  PNV T  +++  F + G++     
Sbjct: 718 TPNVVIYTEMVDGLCKIGKTDEAYKLMLKMEEKGCNPNVVTYTAMIDGFGKSGKIEQCLE 777

Query: 627 LLQGMLNLGLKPSLQTYTLLLS-CCT 651
           L + M + G  P+  TY +L++ CC+
Sbjct: 778 LFRDMCSKGCAPNFITYRVLINHCCS 803



 Score =  147 bits (370), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 93/307 (30%), Positives = 144/307 (46%), Gaps = 6/307 (1%)

Query: 347 FNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYG 406
           F+ +     F  D   Y  MV  L  A  F     +L +M    C PNVVTY  L+    
Sbjct: 266 FDLIDEAEDFVPDTVFYNRMVSGLCEASLFEEAMDILHRMRSSSCIPNVVTYRILLSGCL 325

Query: 407 RANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTF 466
           R   L     +   M   GC P+R  + +LI  + K+     A  ++KKM   G  P   
Sbjct: 326 RKGQLGRCKRILSMMITEGCYPNREIFNSLIHAYCKSRDYSYAYKLFKKMIKCGCQPGYL 385

Query: 467 TYSVIINCLGK------AGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSAL 520
            Y++ I  +        +  L    + + EM++ G + N V  +        A  +  A 
Sbjct: 386 VYNIFIGSVCSNEEQPSSDILDLVEKAYSEMLDLGVVLNKVNVSNFARCLCGAGKFDQAF 445

Query: 521 KLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLW 580
           K+  +M   GF PD  TYS V+  L     +++A ++F EM+R   VP    Y +L+D +
Sbjct: 446 KIICEMMGKGFVPDDSTYSKVIGFLCDASKVEKAFSLFEEMKRNGIVPSVYTYTILIDSF 505

Query: 581 GKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSL 640
            KAG +++A +W++ ML  G  PNV T  +L+ A+L+  Q+  A  L + ML  G KP++
Sbjct: 506 CKAGLIQQARKWFDEMLHKGCTPNVVTYTALIHAYLKAKQMPVADELFEMMLLEGCKPNV 565

Query: 641 QTYTLLL 647
            TYT L+
Sbjct: 566 VTYTALI 572



 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 88/311 (28%), Positives = 150/311 (48%), Gaps = 20/311 (6%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           GF  D+ TY+ ++G L  A +      L ++M R+G  P+V TY  LI S+ +A  + +A
Sbjct: 455 GFVPDDSTYSKVIGFLCDASKVEKAFSLFEEMKRNGIVPSVYTYTILIDSFCKAGLIQQA 514

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
              F +M   GC P+ VTY  LI  + KA  + VA ++++ M   G  P+  TY+ +I+ 
Sbjct: 515 RKWFDEMLHKGCTPNVVTYTALIHAYLKAKQMPVADELFEMMLLEGCKPNVVTYTALIDG 574

Query: 475 LGKAGHLQAAHQLFCEMVNQGCI------------------PNLVTYNIMIALQAKARNY 516
             KAG ++ A Q++  M  +G I                  PN++TY  ++    KA   
Sbjct: 575 HCKAGQIEKACQIYARM--RGDIESSDMDKYFKLDHNNCEGPNVITYGALVDGLCKANRV 632

Query: 517 QSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLL 576
           + A +L   M   G EP+++ Y  V++     G L +A+ VF +M  + + P+   Y   
Sbjct: 633 KEAHELLDTMLAHGCEPNQIVYDAVIDGFCKIGKLQDAQEVFTKMSERGYSPNLYTYSSF 692

Query: 577 VDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGL 636
           +D   K   +    +    ML+    PNV     ++    ++G+  +AY L+  M   G 
Sbjct: 693 IDCLFKDNRLDLVLKVLSKMLENSCTPNVVIYTEMVDGLCKIGKTDEAYKLMLKMEEKGC 752

Query: 637 KPSLQTYTLLL 647
            P++ TYT ++
Sbjct: 753 NPNVVTYTAMI 763



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 92/350 (26%), Positives = 159/350 (45%), Gaps = 61/350 (17%)

Query: 359 DEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHS-------------- 404
           +   + +++    ++R +    KL  +M++ GCQP  + YN  I S              
Sbjct: 348 NREIFNSLIHAYCKSRDYSYAYKLFKKMIKCGCQPGYLVYNIFIGSVCSNEEQPSSDILD 407

Query: 405 -----------------------YGR----ANYLNEALDVFKQMQVVGCEPDRVTYCTLI 437
                                  + R    A   ++A  +  +M   G  PD  TY  +I
Sbjct: 408 LVEKAYSEMLDLGVVLNKVNVSNFARCLCGAGKFDQAFKIICEMMGKGFVPDDSTYSKVI 467

Query: 438 DIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCI 497
                A  ++ A  ++++M+  G+ P  +TY+++I+   KAG +Q A + F EM+++GC 
Sbjct: 468 GFLCDASKVEKAFSLFEEMKRNGIVPSVYTYTILIDSFCKAGLIQQARKWFDEMLHKGCT 527

Query: 498 PNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHC--GYLDEAE 555
           PN+VTY  +I    KA+    A +L+  M   G +P+ VTY+ +++  GHC  G +++A 
Sbjct: 528 PNVVTYTALIHAYLKAKQMPVADELFEMMLLEGCKPNVVTYTALID--GHCKAGQIEKAC 585

Query: 556 AVFAEMR----------------RKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQA 599
            ++A MR                     P+   YG LVD   KA  V++A E  + ML  
Sbjct: 586 QIYARMRGDIESSDMDKYFKLDHNNCEGPNVITYGALVDGLCKANRVKEAHELLDTMLAH 645

Query: 600 GLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSC 649
           G  PN    ++++  F ++G+L DA  +   M   G  P+L TY+  + C
Sbjct: 646 GCEPNQIVYDAVIDGFCKIGKLQDAQEVFTKMSERGYSPNLYTYSSFIDC 695



 Score =  137 bits (346), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 79/276 (28%), Positives = 129/276 (46%), Gaps = 6/276 (2%)

Query: 362 TYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQM 421
           TY  ++    R  Q G   ++L  M+ +GC PN   +N LIH+Y ++   + A  +FK+M
Sbjct: 316 TYRILLSGCLRKGQLGRCKRILSMMITEGCYPNREIFNSLIHAYCKSRDYSYAYKLFKKM 375

Query: 422 QVVGCEPDRVTYCTLI------DIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCL 475
              GC+P  + Y   I      +    +  LD+    Y +M   G+  +    S    CL
Sbjct: 376 IKCGCQPGYLVYNIFIGSVCSNEEQPSSDILDLVEKAYSEMLDLGVVLNKVNVSNFARCL 435

Query: 476 GKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDK 535
             AG    A ++ CEM+ +G +P+  TY+ +I     A   + A  L+ +M+  G  P  
Sbjct: 436 CGAGKFDQAFKIICEMMGKGFVPDDSTYSKVIGFLCDASKVEKAFSLFEEMKRNGIVPSV 495

Query: 536 VTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEA 595
            TY+I+++     G + +A   F EM  K   P+   Y  L+  + KA  +  A E +E 
Sbjct: 496 YTYTILIDSFCKAGLIQQARKWFDEMLHKGCTPNVVTYTALIHAYLKAKQMPVADELFEM 555

Query: 596 MLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGM 631
           ML  G +PNV T  +L+    + GQ+  A  +   M
Sbjct: 556 MLLEGCKPNVVTYTALIDGHCKAGQIEKACQIYARM 591



 Score =  128 bits (321), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 89/327 (27%), Positives = 149/327 (45%), Gaps = 47/327 (14%)

Query: 362 TYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQM 421
           TY  +V  L +A +    ++LLD M+  GC+PN + Y+ +I  + +   L +A +VF +M
Sbjct: 618 TYGALVDGLCKANRVKEAHELLDTMLAHGCEPNQIVYDAVIDGFCKIGKLQDAQEVFTKM 677

Query: 422 QVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHL 481
              G  P+  TY + ID   K   LD+ + +  KM     +P+   Y+ +++ L K G  
Sbjct: 678 SERGYSPNLYTYSSFIDCLFKDNRLDLVLKVLSKMLENSCTPNVVIYTEMVDGLCKIGKT 737

Query: 482 QAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIV 541
             A++L  +M  +GC PN+VTY  MI    K+   +  L+L+RDM + G  P+ +TY + 
Sbjct: 738 DEAYKLMLKMEEKGCNPNVVTYTAMIDGFGKSGKIEQCLELFRDMCSKGCAPNFITYRV- 796

Query: 542 MEVLGHC---GYLDEAEAVFAEMRRKNW-------------------------------- 566
             ++ HC   G LDEA  +  EM++  W                                
Sbjct: 797 --LINHCCSNGLLDEAYKLLDEMKQTYWPKHILSHRKIIEGFSQEFITSIGLLDELSENE 854

Query: 567 -VPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFL-----RVGQ 620
            VP + +Y +L+D + KAG +  A +  E +  +   P+    N  L A L        +
Sbjct: 855 SVPVDSLYRILIDNYIKAGRLEVALDLLEEISSS---PSHAVSNKYLYASLIENLSHASK 911

Query: 621 LSDAYHLLQGMLNLGLKPSLQTYTLLL 647
           +  A  L   M++  + P L     L+
Sbjct: 912 VDKALELYASMISKNVVPELSILVHLI 938



 Score =  118 bits (296), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 65/223 (29%), Positives = 112/223 (50%)

Query: 393 PNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDM 452
           PNV+TY  L+    +AN + EA ++   M   GCEP+++ Y  +ID   K G L  A ++
Sbjct: 614 PNVITYGALVDGLCKANRVKEAHELLDTMLAHGCEPNQIVYDAVIDGFCKIGKLQDAQEV 673

Query: 453 YKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAK 512
           + KM   G SP+ +TYS  I+CL K   L    ++  +M+   C PN+V Y  M+    K
Sbjct: 674 FTKMSERGYSPNLYTYSSFIDCLFKDNRLDLVLKVLSKMLENSCTPNVVIYTEMVDGLCK 733

Query: 513 ARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPV 572
                 A KL   M+  G  P+ VTY+ +++  G  G +++   +F +M  K   P+   
Sbjct: 734 IGKTDEAYKLMLKMEEKGCNPNVVTYTAMIDGFGKSGKIEQCLELFRDMCSKGCAPNFIT 793

Query: 573 YGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAF 615
           Y +L++     G + +A++  + M Q     ++ +   ++  F
Sbjct: 794 YRVLINHCCSNGLLDEAYKLLDEMKQTYWPKHILSHRKIIEGF 836



 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 64/277 (23%), Positives = 137/277 (49%), Gaps = 4/277 (1%)

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
           + G+  + +TY++ +  L +  +   + K+L +M+ + C PNVV Y  ++    +    +
Sbjct: 679 ERGYSPNLYTYSSFIDCLFKDNRLDLVLKVLSKMLENSCTPNVVIYTEMVDGLCKIGKTD 738

Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
           EA  +  +M+  GC P+ VTY  +ID   K+G ++  +++++ M + G +P+  TY V+I
Sbjct: 739 EAYKLMLKMEEKGCNPNVVTYTAMIDGFGKSGKIEQCLELFRDMCSKGCAPNFITYRVLI 798

Query: 473 NCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFE 532
           N     G L  A++L  EM       +++++  +I  +  ++ + +++ L  ++      
Sbjct: 799 NHCCSNGLLDEAYKLLDEMKQTYWPKHILSHRKII--EGFSQEFITSIGLLDELSENESV 856

Query: 533 PDKVTYSIVMEVLGHCGYLDEAEAVFAEMRR--KNWVPDEPVYGLLVDLWGKAGNVRKAW 590
           P    Y I+++     G L+ A  +  E+     + V ++ +Y  L++    A  V KA 
Sbjct: 857 PVDSLYRILIDNYIKAGRLEVALDLLEEISSSPSHAVSNKYLYASLIENLSHASKVDKAL 916

Query: 591 EWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHL 627
           E Y +M+   + P +     L+   ++V +  +A  L
Sbjct: 917 ELYASMISKNVVPELSILVHLIKGLIKVDKWQEALQL 953



 Score = 56.6 bits (135), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 46/179 (25%), Positives = 77/179 (43%), Gaps = 3/179 (1%)

Query: 498 PNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAV 557
           P+  TYN +I +  +A    +A  + R+M +  F  D+ T S     L   G   EA  +
Sbjct: 209 PSQTTYNALIQVFLRADKLDTAYLVKREMLSYAFVMDRYTLSCFAYSLCKGGKCREAFDL 268

Query: 558 FAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLR 617
             E   +++VPD   Y  +V    +A    +A +    M  +   PNV T   LLS  LR
Sbjct: 269 IDEA--EDFVPDTVFYNRMVSGLCEASLFEEAMDILHRMRSSSCIPNVVTYRILLSGCLR 326

Query: 618 VGQLSDAYHLLQGMLNLGLKPSLQTY-TLLLSCCTEARSPYDMGFCHELMAVSGHPAHM 675
            GQL     +L  M+  G  P+ + + +L+ + C      Y      +++     P ++
Sbjct: 327 KGQLGRCKRILSMMITEGCYPNREIFNSLIHAYCKSRDYSYAYKLFKKMIKCGCQPGYL 385


>gi|297605196|ref|NP_001056837.2| Os06g0152500 [Oryza sativa Japonica Group]
 gi|255676726|dbj|BAF18751.2| Os06g0152500 [Oryza sativa Japonica Group]
          Length = 717

 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 136/475 (28%), Positives = 220/475 (46%), Gaps = 40/475 (8%)

Query: 348 NWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGR 407
           + +R +   K +  T+ +MV  L +A +     K+ D+MVR+G  P+VV+YN L+  Y +
Sbjct: 211 SLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCK 270

Query: 408 ANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFT 467
              L+E+L VF +M   G  PD VT+ +LI    KAG L+ A+ +  +M+  GL  +  T
Sbjct: 271 VGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVT 330

Query: 468 YSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQ 527
           ++ +I+   K G L  A     EM   G  P++V YN +I    K      A +L R+M+
Sbjct: 331 FTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREME 390

Query: 528 NAGFEPDKVTYSIVMEVLGHC--GYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGN 585
               +PD VTYS ++   G+C  G LD A  +  +M +K  +PD   Y  L+    +   
Sbjct: 391 AKRVKPDVVTYSTIIS--GYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKR 448

Query: 586 VRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTL 645
           +  A E +E MLQ G++P+  T  +L+    + G +  A  L   M+  G+ P + TY++
Sbjct: 449 LNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSV 508

Query: 646 LLSCCTEARSPYDMGFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSED 705
           L++  +++    +              AH  L  +    P   N++     +  +M    
Sbjct: 509 LINGLSKSARTKE--------------AHRLLFKLYHEDPVPDNIK-----YDALMLCCS 549

Query: 706 RESKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAVKEKGMSYWLINLHVMSDGT 765
           +   + +V  +  F  K GL +EA  V++    +N   D       S + I +H    G 
Sbjct: 550 KAEFKSVVALLKGFCMK-GLMKEADKVYQSMLDRNWKLDG------SVYSILIHGHCRGG 602

Query: 766 AVIALSRTLAWFRKQMLISGVGP---SRIDIVTGWGRRSRVTGTSLVRQAVQELL 817
            V    R    F KQML SG  P   S I +V G      V        A+Q+LL
Sbjct: 603 NV----RKALSFHKQMLRSGFSPNSTSTISLVRGLFEEGMVVEAD---NAIQDLL 650



 Score =  151 bits (381), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 85/269 (31%), Positives = 149/269 (55%), Gaps = 1/269 (0%)

Query: 381 KLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIH 440
           + L  M+R G  PNV TYN L+ +      L EA+ V   M+  GC P+ VTY TL+   
Sbjct: 138 RFLSSMLRHGVAPNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAF 197

Query: 441 AKAGFLDVAMDMYKKMQAAG-LSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPN 499
            +AG LD A  +   M+  G   P+  T++ ++N L KAG ++ A ++F EMV +G  P+
Sbjct: 198 CRAGELDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPD 257

Query: 500 LVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFA 559
           +V+YN +++   K      +L ++ +M   G  PD VT++ ++      G L++A A+ A
Sbjct: 258 VVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVA 317

Query: 560 EMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVG 619
           +MR +    +E  +  L+D + K G +  A    E M + G++P+V   N+L++ + ++G
Sbjct: 318 QMRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLG 377

Query: 620 QLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
           ++  A  L++ M    +KP + TY+ ++S
Sbjct: 378 RMDLARELIREMEAKRVKPDVVTYSTIIS 406



 Score = 97.1 bits (240), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 67/278 (24%), Positives = 121/278 (43%), Gaps = 50/278 (17%)

Query: 357 KHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALD 416
           K D  TY+T++    +     +  +L  +M++ G  P+ +TY+ LI        LN+A +
Sbjct: 395 KPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACE 454

Query: 417 VFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLG 476
           +F+ M  +G +PD  TY TLID H K G ++ A+ ++ +M   G+ PD  TYSV+IN L 
Sbjct: 455 LFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLS 514

Query: 477 KAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKAR---------------------- 514
           K+   + AH+L  ++ ++  +P+ + Y+ ++   +KA                       
Sbjct: 515 KSARTKEAHRLLFKLYHEDPVPDNIKYDALMLCCSKAEFKSVVALLKGFCMKGLMKEADK 574

Query: 515 ----------------------------NYQSALKLYRDMQNAGFEPDKVTYSIVMEVLG 546
                                       N + AL  ++ M  +GF P+  +   ++  L 
Sbjct: 575 VYQSMLDRNWKLDGSVYSILIHGHCRGGNVRKALSFHKQMLRSGFSPNSTSTISLVRGLF 634

Query: 547 HCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAG 584
             G + EA+    ++     + D      L+DL  K G
Sbjct: 635 EEGMVVEADNAIQDLLTCCPLADAEASKALIDLNRKEG 672


>gi|302769784|ref|XP_002968311.1| hypothetical protein SELMODRAFT_89033 [Selaginella moellendorffii]
 gi|300163955|gb|EFJ30565.1| hypothetical protein SELMODRAFT_89033 [Selaginella moellendorffii]
          Length = 600

 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 104/335 (31%), Positives = 162/335 (48%), Gaps = 43/335 (12%)

Query: 355 GFKHDEHTYTTMV-GILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGR------ 407
           GF  +  TY+T++ G+    R+  +  +LL++MV +GC+P++V+YN LIH   R      
Sbjct: 217 GFSPNVITYSTLISGLCRELRRLESARQLLEKMVLNGCKPDIVSYNALIHGLAREQGVSE 276

Query: 408 -----------------------------ANYLNEALDVFKQMQVVGCEPDRVTYCTLID 438
                                         + +NEA ++F  +   G EPD +TY   ID
Sbjct: 277 ALKLFGSVLRQGYEPEVPTYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFID 336

Query: 439 IHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIP 498
              KAG ++ A+ M K M   G  PD  +++ +IN L K   +  A  L   M  +GC P
Sbjct: 337 GLCKAGRVEDALLMLKDMDEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSP 396

Query: 499 NLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHC-----GYLDE 553
           N +++N +I  Q +A  ++ A+  +++M   G +P  VTY+I+++  G C     G + E
Sbjct: 397 NAISFNTLICGQCRAGKWKKAMTTFKEMLKRGVKPTVVTYNILVD--GLCKARQEGRIKE 454

Query: 554 AEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLS 613
           A  +F  M  K  VPD   Y  L+D  GKAG +  A     AM   G  PNV T NSL+S
Sbjct: 455 AITLFDAMIEKGRVPDVVTYSALIDGLGKAGKLDDARRLLGAMEAKGCIPNVYTYNSLIS 514

Query: 614 AFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
               + ++ +A  L   M+  G  P   TY  ++S
Sbjct: 515 GLCGLDKVDEALELFVAMVEKGCVPDTITYGTIIS 549



 Score =  151 bits (382), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 113/418 (27%), Positives = 199/418 (47%), Gaps = 36/418 (8%)

Query: 347 FNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYG 406
           F+ +R+  GF  +  TY  ++  L    +      L ++M++ G  P+VVTYN L+H + 
Sbjct: 73  FDGMRKH-GFWPNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFC 131

Query: 407 RANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTF 466
           +   L+EAL +F      G  PD VTY  LI+   KA  LD A  + ++M +  L PD  
Sbjct: 132 KVGKLDEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSESLVPDVV 191

Query: 467 TYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIA-LQAKARNYQSALKLYRD 525
           TY+ ++N L K G +  A  L   +V++G  PN++TY+ +I+ L  + R  +SA +L   
Sbjct: 192 TYNSLVNGLCKNGRVDEARML---IVDKGFSPNVITYSTLISGLCRELRRLESARQLLEK 248

Query: 526 MQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGN 585
           M   G +PD V+Y+ ++  L     + EA  +F  + R+ + P+ P Y +L+D   K   
Sbjct: 249 MVLNGCKPDIVSYNALIHGLAREQGVSEALKLFGSVLRQGYEPEVPTYNILIDGLLKEDR 308

Query: 586 VRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTL 645
           V +A+E +  +++ GL P+  T    +    + G++ DA  +L+ M   G  P + ++  
Sbjct: 309 VNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALLMLKDMDEKGCVPDVVSHNA 368

Query: 646 LLSCCTEARSPYDMGFCHELMAVSGHPAHMFLLSMPSPG--PDGQNVRDHV------GSF 697
           +++           G C E        A + L  M + G  P+  +    +      G +
Sbjct: 369 VIN-----------GLCKEKRV---DEAEVLLSGMEAKGCSPNAISFNTLICGQCRAGKW 414

Query: 698 LEMMHSEDRESKRGLVDAVVDF---------LHKSGLKEEAGSVWEVAAQKNVYPDAV 746
            + M +     KRG+   VV +           + G  +EA ++++   +K   PD V
Sbjct: 415 KKAMTTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRIKEAITLFDAMIEKGRVPDVV 472



 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 104/375 (27%), Positives = 177/375 (47%), Gaps = 8/375 (2%)

Query: 287 FSRHFASTGNVVESVSRILRQWKWGPLAEEALGNTNYSMDAYQANQVLKQL---QDHTVA 343
           FS +  +   ++  + R LR+ +      E +       D    N ++  L   Q  + A
Sbjct: 218 FSPNVITYSTLISGLCRELRRLESARQLLEKMVLNGCKPDIVSYNALIHGLAREQGVSEA 277

Query: 344 LGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIH 403
           L  F  + RQ G++ +  TY  ++  L +  +     +L   +V+ G +P+ +TY   I 
Sbjct: 278 LKLFGSVLRQ-GYEPEVPTYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFID 336

Query: 404 SYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSP 463
              +A  + +AL + K M   GC PD V++  +I+   K   +D A  +   M+A G SP
Sbjct: 337 GLCKAGRVEDALLMLKDMDEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSP 396

Query: 464 DTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARN---YQSAL 520
           +  +++ +I    +AG  + A   F EM+ +G  P +VTYNI++    KAR     + A+
Sbjct: 397 NAISFNTLICGQCRAGKWKKAMTTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRIKEAI 456

Query: 521 KLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLW 580
            L+  M   G  PD VTYS +++ LG  G LD+A  +   M  K  +P+   Y  L+   
Sbjct: 457 TLFDAMIEKGRVPDVVTYSALIDGLGKAGKLDDARRLLGAMEAKGCIPNVYTYNSLISGL 516

Query: 581 GKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSL 640
                V +A E + AM++ G  P+  T  +++SA  +   +  A  L  G L  G+ P+ 
Sbjct: 517 CGLDKVDEALELFVAMVEKGCVPDTITYGTIISALCKQEMVDKALALFDGSLEAGVVPTS 576

Query: 641 QTY-TLLLSCCTEAR 654
             Y +L+   C  AR
Sbjct: 577 GMYFSLIDGLCAVAR 591



 Score =  136 bits (342), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 90/292 (30%), Positives = 147/292 (50%), Gaps = 8/292 (2%)

Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLI 402
           A   F+ L +  G + D  TYT  +  L +A +      +L  M   GC P+VV++N +I
Sbjct: 312 AFELFSGLVKH-GLEPDAITYTVFIDGLCKAGRVEDALLMLKDMDEKGCVPDVVSHNAVI 370

Query: 403 HSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLS 462
           +   +   ++EA  +   M+  GC P+ +++ TLI    +AG    AM  +K+M   G+ 
Sbjct: 371 NGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICGQCRAGKWKKAMTTFKEMLKRGVK 430

Query: 463 PDTFTYSVIINCLGKA---GHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSA 519
           P   TY+++++ L KA   G ++ A  LF  M+ +G +P++VTY+ +I    KA     A
Sbjct: 431 PTVVTYNILVDGLCKARQEGRIKEAITLFDAMIEKGRVPDVVTYSALIDGLGKAGKLDDA 490

Query: 520 LKLYRDMQNAGFEPDKVTYSIVMEVLGHCGY--LDEAEAVFAEMRRKNWVPDEPVYGLLV 577
            +L   M+  G  P+  TY+ ++   G CG   +DEA  +F  M  K  VPD   YG ++
Sbjct: 491 RRLLGAMEAKGCIPNVYTYNSLIS--GLCGLDKVDEALELFVAMVEKGCVPDTITYGTII 548

Query: 578 DLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQ 629
               K   V KA   ++  L+AG+ P      SL+     V ++ +A  LLQ
Sbjct: 549 SALCKQEMVDKALALFDGSLEAGVVPTSGMYFSLIDGLCAVARVDEALKLLQ 600



 Score =  121 bits (304), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 85/325 (26%), Positives = 153/325 (47%), Gaps = 34/325 (10%)

Query: 356 FKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEAL 415
           +  D +T   ++  L ++ +    ++ ++Q++  G   ++ T+N  I    RA+ + +A 
Sbjct: 12  YSPDAYTVGILLRSLLKSGKIEKAHRFVEQLLVKG-LCDISTFNIYISGLCRASRIGDAQ 70

Query: 416 DVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCL 475
            VF  M+  G  P+R+TY  L+      G +  A  +Y++M  AG SPD  TY+ +++  
Sbjct: 71  TVFDGMRKHGFWPNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGF 130

Query: 476 GKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDK 535
            K G L  A ++F   V +G +P++VTYN +I    KA     A ++ + M +    PD 
Sbjct: 131 CKVGKLDEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSESLVPDV 190

Query: 536 VTYSIVMEVLGHCGYLDEAEAVFA--------------------EMRR------------ 563
           VTY+ ++  L   G +DEA  +                      E+RR            
Sbjct: 191 VTYNSLVNGLCKNGRVDEARMLIVDKGFSPNVITYSTLISGLCRELRRLESARQLLEKMV 250

Query: 564 -KNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLS 622
                PD   Y  L+    +   V +A + + ++L+ G  P VPT N L+   L+  +++
Sbjct: 251 LNGCKPDIVSYNALIHGLAREQGVSEALKLFGSVLRQGYEPEVPTYNILIDGLLKEDRVN 310

Query: 623 DAYHLLQGMLNLGLKPSLQTYTLLL 647
           +A+ L  G++  GL+P   TYT+ +
Sbjct: 311 EAFELFSGLVKHGLEPDAITYTVFI 335



 Score = 99.4 bits (246), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 53/194 (27%), Positives = 110/194 (56%), Gaps = 2/194 (1%)

Query: 462 SPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALK 521
           SPD +T  +++  L K+G ++ AH+   +++ +G + ++ T+NI I+   +A     A  
Sbjct: 13  SPDAYTVGILLRSLLKSGKIEKAHRFVEQLLVKG-LCDISTFNIYISGLCRASRIGDAQT 71

Query: 522 LYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWG 581
           ++  M+  GF P+++TY+ ++  L + G + +A+A++  M +  + PD   Y  L+  + 
Sbjct: 72  VFDGMRKHGFWPNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFC 131

Query: 582 KAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQ 641
           K G + +A + ++  ++ G  P+V T N+L++ F +  +L +A  +LQ M++  L P + 
Sbjct: 132 KVGKLDEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSESLVPDVV 191

Query: 642 TY-TLLLSCCTEAR 654
           TY +L+   C   R
Sbjct: 192 TYNSLVNGLCKNGR 205



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 50/191 (26%), Positives = 79/191 (41%), Gaps = 21/191 (10%)

Query: 566 WVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAY 625
           + PD    G+L+    K+G + KA  + E +L  GL  ++ T N  +S   R  ++ DA 
Sbjct: 12  YSPDAYTVGILLRSLLKSGKIEKAHRFVEQLLVKGL-CDISTFNIYISGLCRASRIGDAQ 70

Query: 626 HLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGFCHELMAVSGHPAHMFLLSMPSPGP 685
            +  GM   G  P+  TY  LLS         D    +E M  +G+          SP  
Sbjct: 71  TVFDGMRKHGFWPNRITYNALLSGLCNGGRMSDAQALYERMIKAGY----------SPDV 120

Query: 686 DGQNVRDH----VGSFLEMMHSEDRESKRGLV------DAVVDFLHKSGLKEEAGSVWEV 735
              N   H    VG   E +   D   KRG V      +A+++   K+   +EA  + + 
Sbjct: 121 VTYNTLLHGFCKVGKLDEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQR 180

Query: 736 AAQKNVYPDAV 746
              +++ PD V
Sbjct: 181 MVSESLVPDVV 191


>gi|255557937|ref|XP_002519997.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223540761|gb|EEF42321.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 1429

 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 92/303 (30%), Positives = 165/303 (54%), Gaps = 8/303 (2%)

Query: 350 LRRQAGFKHDEHTYTTMVGILGRARQFGAIN-----KLLDQMVRDGCQPNVVTYNRLIHS 404
           L R+ G + D  ++ T++    +A   GA+      +LL+++ R G +P+++TYN LI +
Sbjct: 235 LMRERGCEPDLVSFNTLINARLKA---GAMTPNVAIELLNEVRRSGLRPDIITYNTLISA 291

Query: 405 YGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPD 464
             R + L EA+ VF  M+   C+PD  TY  +I ++ + GF   A  ++K++++ G  PD
Sbjct: 292 CSRESNLEEAVKVFDDMEAHYCQPDLWTYNAMISVYGRCGFSGKAEQLFKELESKGYFPD 351

Query: 465 TFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYR 524
             TY+ ++    + G++    ++  EMV  G I + +TYN +I +  K   +  AL+LYR
Sbjct: 352 AVTYNSLLYAFAREGNVDKVKEICNEMVQMGFIRDEMTYNTIIHMYGKQGQHGLALQLYR 411

Query: 525 DMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAG 584
           DM+ +G  PD +TY+++++ LG    + EA  V +EM      P    Y  L+  + +AG
Sbjct: 412 DMKLSGRTPDAITYTVLIDSLGKANKMVEAANVMSEMLNIGVKPTLRTYSALICGYARAG 471

Query: 585 NVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYT 644
              +A E ++ M ++G+RP+    + +L  FLR  + + A  L + M+  G+ P    Y 
Sbjct: 472 QRLEAEETFDCMRRSGIRPDQLAYSVMLDVFLRFDEATKAMMLYREMVRDGITPDPTVYG 531

Query: 645 LLL 647
            +L
Sbjct: 532 AML 534



 Score =  159 bits (403), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 89/315 (28%), Positives = 170/315 (53%), Gaps = 5/315 (1%)

Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLI 402
           AL  F WL  +  +  +     T++ +LG+A Q     ++  +         V  YN ++
Sbjct: 159 ALEVFEWLNLRHWYSPNARMLATILAVLGKANQEALAVEIFIR-AESTVDNTVQVYNAMM 217

Query: 403 HSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFL--DVAMDMYKKMQAAG 460
             Y R    N+   +   M+  GCEPD V++ TLI+   KAG +  +VA+++  +++ +G
Sbjct: 218 GVYARTGRFNKVQGMLDLMRERGCEPDLVSFNTLINARLKAGAMTPNVAIELLNEVRRSG 277

Query: 461 LSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSAL 520
           L PD  TY+ +I+   +  +L+ A ++F +M    C P+L TYN MI++  +      A 
Sbjct: 278 LRPDIITYNTLISACSRESNLEEAVKVFDDMEAHYCQPDLWTYNAMISVYGRCGFSGKAE 337

Query: 521 KLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLW 580
           +L++++++ G+ PD VTY+ ++      G +D+ + +  EM +  ++ DE  Y  ++ ++
Sbjct: 338 QLFKELESKGYFPDAVTYNSLLYAFAREGNVDKVKEICNEMVQMGFIRDEMTYNTIIHMY 397

Query: 581 GKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSL 640
           GK G    A + Y  M  +G  P+  T   L+ +  +  ++ +A +++  MLN+G+KP+L
Sbjct: 398 GKQGQHGLALQLYRDMKLSGRTPDAITYTVLIDSLGKANKMVEAANVMSEMLNIGVKPTL 457

Query: 641 QTYTLLLSCCTEARS 655
           +TY+ L+  C  AR+
Sbjct: 458 RTYSALI--CGYARA 470



 Score =  146 bits (369), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 93/312 (29%), Positives = 150/312 (48%), Gaps = 2/312 (0%)

Query: 342 VALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRL 401
           VA+   N +RR +G + D  TY T++    R        K+ D M    CQP++ TYN +
Sbjct: 265 VAIELLNEVRR-SGLRPDIITYNTLISACSRESNLEEAVKVFDDMEAHYCQPDLWTYNAM 323

Query: 402 IHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGL 461
           I  YGR  +  +A  +FK+++  G  PD VTY +L+   A+ G +D   ++  +M   G 
Sbjct: 324 ISVYGRCGFSGKAEQLFKELESKGYFPDAVTYNSLLYAFAREGNVDKVKEICNEMVQMGF 383

Query: 462 SPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALK 521
             D  TY+ II+  GK G    A QL+ +M   G  P+ +TY ++I    KA     A  
Sbjct: 384 IRDEMTYNTIIHMYGKQGQHGLALQLYRDMKLSGRTPDAITYTVLIDSLGKANKMVEAAN 443

Query: 522 LYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWG 581
           +  +M N G +P   TYS ++      G   EAE  F  MRR    PD+  Y +++D++ 
Sbjct: 444 VMSEMLNIGVKPTLRTYSALICGYARAGQRLEAEETFDCMRRSGIRPDQLAYSVMLDVFL 503

Query: 582 KAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNL-GLKPSL 640
           +     KA   Y  M++ G+ P+     ++L    R  ++ D   +++ M  + G+ P  
Sbjct: 504 RFDEATKAMMLYREMVRDGITPDPTVYGAMLRNLGRENKVEDIQRIIRDMEEVCGMNPQA 563

Query: 641 QTYTLLLSCCTE 652
               L+   C E
Sbjct: 564 IASILVKGECYE 575



 Score =  114 bits (286), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 105/497 (21%), Positives = 205/497 (41%), Gaps = 54/497 (10%)

Query: 352  RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
            + AG+    H Y  M+G+L + ++   +  ++ +M   G +P++  +N ++  Y   +  
Sbjct: 867  KAAGYFPTMHLYRIMIGLLCKGKRVRDVEAMVTEMEEAGFRPDLSIWNSMLRLYTGIDDF 926

Query: 412  NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
             + + ++++++  G +PD  TY TLI ++ +    +    +  +M+  GL P   TY  +
Sbjct: 927  RKTVQIYQRIKEDGLQPDEDTYNTLIVMYCRDHRPEEGCSLMHEMRRIGLEPKLDTYKSL 986

Query: 472  INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF 531
            I   GK   +  A +LF E++++G   +   Y+IM+ +   + N+  A KL   M++AG 
Sbjct: 987  IAAFGKQQLVVDAEELFEELLSKGSKLDRSFYHIMMKIYRNSGNHSKAEKLLSMMKDAGV 1046

Query: 532  EPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWE 591
            EP   T  ++M   G  G   EAE V   ++                             
Sbjct: 1047 EPTIATMHLLMVSYGSSGQPQEAEKVLTNLK----------------------------- 1077

Query: 592  WYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCT 651
                  + GL  +    +S++ A+L+    S     L  M   GL+P  + +T  +   +
Sbjct: 1078 ------EMGLSLSTLPYSSVIDAYLKNKDYSVGIQKLVEMKKEGLEPDHRIWTCFIRAAS 1131

Query: 652  EARSPYDMGFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRESKRG 711
             +   +D     + +  SG      L++  S      ++   V   LEM+ + +  +   
Sbjct: 1132 LSEHTHDAILLLQALQDSGFDLPSRLITERS-----DSLVLEVDHCLEMLETMEDNAAFN 1186

Query: 712  LVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAVKEKGMSYWLINLHVMSDGTAVIALS 771
             V+A+ D L    L+  A  V+ +A ++++Y   V       W  +   +S G    AL 
Sbjct: 1187 FVNALEDLLWAFELRATASWVFRLAVKRSIYCHDVFRVAEQDWGADFRKLSGGA---ALD 1243

Query: 772  RTLAWFRKQMLISGVGPSRIDIVTGWGRRSRVTGTSLVRQAVQELLHMFSFPFFTENGNS 831
             +L  +          P  + ++TG    + V+  + ++  + E+      PF      S
Sbjct: 1244 ASLQGY-------PASPKSVVLITGTAEYNMVSLDNTLKACLWEM----GSPFLPCRTRS 1292

Query: 832  GCFVGCGEPLNKWLLQS 848
            G  V     L  WL  S
Sbjct: 1293 GLLVAKAHSLRMWLKDS 1309



 Score = 88.2 bits (217), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 62/250 (24%), Positives = 121/250 (48%), Gaps = 4/250 (1%)

Query: 401 LIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAG 460
           +I +YG+     +A  +   ++      DR  +  LI  +A +G  + A  ++  M   G
Sbjct: 741 VIETYGKLKLWQKAESLVGNLRQRCTNVDRKVWNALIQAYAASGCYEQARAVFNTMMRDG 800

Query: 461 LSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKAR--NYQS 518
            SP   + + ++  L   G L+  + +  E+ + G    +   +I++ L A AR  N   
Sbjct: 801 PSPTVDSINGLLQALIVDGRLEELYVVTQEIQDMGF--QISKSSILLILDAFARVSNIAE 858

Query: 519 ALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVD 578
           A K+Y+ M+ AG+ P    Y I++ +L     + + EA+  EM    + PD  ++  ++ 
Sbjct: 859 AKKIYQGMKAAGYFPTMHLYRIMIGLLCKGKRVRDVEAMVTEMEEAGFRPDLSIWNSMLR 918

Query: 579 LWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKP 638
           L+    + RK  + Y+ + + GL+P+  T N+L+  + R  +  +   L+  M  +GL+P
Sbjct: 919 LYTGIDDFRKTVQIYQRIKEDGLQPDEDTYNTLIVMYCRDHRPEEGCSLMHEMRRIGLEP 978

Query: 639 SLQTYTLLLS 648
            L TY  L++
Sbjct: 979 KLDTYKSLIA 988



 Score = 69.7 bits (169), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 75/303 (24%), Positives = 125/303 (41%), Gaps = 27/303 (8%)

Query: 413 EALDVF--------KQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPD 464
           EALD+         K  Q+V  E   VT C       KA  LD A+  Y   +      D
Sbjct: 611 EALDLLQFLKGHVSKSNQLVA-EASIVTLC-------KAKQLDAALKEYNDTREF----D 658

Query: 465 TFT-----YSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSA 519
            FT     Y  +I C  +      A Q+F +M   G  P+   Y  M+ +  K    ++A
Sbjct: 659 WFTGSCTMYESLIQCCEENEFTAEASQIFSDMRFNGVKPSKSLYRSMVLMYCKMGFPETA 718

Query: 520 LKLYRDMQNAGFEPDKVTYSI-VMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVD 578
             L    +  G   DK++  + V+E  G      +AE++   +R++    D  V+  L+ 
Sbjct: 719 HYLIDLAEIEGMPFDKISIDVAVIETYGKLKLWQKAESLVGNLRQRCTNVDRKVWNALIQ 778

Query: 579 LWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKP 638
            +  +G   +A   +  M++ G  P V + N LL A +  G+L + Y + Q + ++G + 
Sbjct: 779 AYAASGCYEQARAVFNTMMRDGPSPTVDSINGLLQALIVDGRLEELYVVTQEIQDMGFQI 838

Query: 639 SLQTYTLLLSCCTEARSPYDMGFCHELMAVSGHPAHMFLLS-MPSPGPDGQNVRDHVGSF 697
           S  +  L+L       +  +    ++ M  +G+   M L   M      G+ VRD     
Sbjct: 839 SKSSILLILDAFARVSNIAEAKKIYQGMKAAGYFPTMHLYRIMIGLLCKGKRVRDVEAMV 898

Query: 698 LEM 700
            EM
Sbjct: 899 TEM 901


>gi|224135699|ref|XP_002322139.1| predicted protein [Populus trichocarpa]
 gi|222869135|gb|EEF06266.1| predicted protein [Populus trichocarpa]
          Length = 866

 Score =  164 bits (415), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 105/354 (29%), Positives = 172/354 (48%), Gaps = 36/354 (10%)

Query: 336 QLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRA----------RQFGA------- 378
           Q  D   +L  F  ++RQ   K +EH YT M+ +LGR            + GA       
Sbjct: 119 QRGDWQRSLRLFKHMQRQIWCKPNEHIYTIMISLLGREGLLEKCSDIFEEMGAHGVSRSV 178

Query: 379 ------IN------------KLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEAL-DVFK 419
                 IN            +LL++M ++   P+++TYN +I+S  R     E L  +F 
Sbjct: 179 FSYTALINSYGRNGKYEVSLELLERMKKERVSPSILTYNTVINSCARGGLDWEGLLGLFA 238

Query: 420 QMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAG 479
           +M+  G +PD VTY TL+   +  G  D A  +++ M   G+ PD  TY+ +++  GK  
Sbjct: 239 EMRHEGIQPDIVTYNTLLCACSNRGLGDEAEMVFRTMNEGGVVPDITTYTYLVDTFGKLN 298

Query: 480 HLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYS 539
            L    +L  EM + G +P + +YN+++   A+  N + A  ++R MQ AG  P+  TYS
Sbjct: 299 RLDKVSELLKEMASTGNVPEISSYNVLLEAYARIGNIEDATGVFRLMQEAGCVPNAETYS 358

Query: 540 IVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQA 599
           I++ + G  G  DE   +F EM+  N  PD   Y  L+D++G+ G  ++    +  M + 
Sbjct: 359 ILLGLYGKHGRYDEVRELFLEMKVSNTEPDAATYNTLIDVFGEGGYFKEVVTLFHDMAEE 418

Query: 600 GLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEA 653
            + PN+ T   L+ A  + G   DA  +L  M   G+ PS + YT ++    +A
Sbjct: 419 NVEPNMETYEGLIFACGKGGLHDDAKKILLHMSEKGMIPSSKAYTGVIEAYGQA 472



 Score =  135 bits (340), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 77/293 (26%), Positives = 140/293 (47%), Gaps = 1/293 (0%)

Query: 344 LGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIH 403
           LG F  +R + G + D  TY T++              +   M   G  P++ TY  L+ 
Sbjct: 234 LGLFAEMRHE-GIQPDIVTYNTLLCACSNRGLGDEAEMVFRTMNEGGVVPDITTYTYLVD 292

Query: 404 SYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSP 463
           ++G+ N L++  ++ K+M   G  P+  +Y  L++ +A+ G ++ A  +++ MQ AG  P
Sbjct: 293 TFGKLNRLDKVSELLKEMASTGNVPEISSYNVLLEAYARIGNIEDATGVFRLMQEAGCVP 352

Query: 464 DTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLY 523
           +  TYS+++   GK G      +LF EM      P+  TYN +I +  +   ++  + L+
Sbjct: 353 NAETYSILLGLYGKHGRYDEVRELFLEMKVSNTEPDAATYNTLIDVFGEGGYFKEVVTLF 412

Query: 524 RDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKA 583
            DM     EP+  TY  ++   G  G  D+A+ +   M  K  +P    Y  +++ +G+A
Sbjct: 413 HDMAEENVEPNMETYEGLIFACGKGGLHDDAKKILLHMSEKGMIPSSKAYTGVIEAYGQA 472

Query: 584 GNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGL 636
               +A      M + G +P + T N+L+  F R G   +   +L  M + G+
Sbjct: 473 AMYEEALVTLNTMNEMGSKPTIETYNTLIYMFARGGLYKETEAILLKMGDFGV 525



 Score =  133 bits (335), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 101/457 (22%), Positives = 192/457 (42%), Gaps = 41/457 (8%)

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
           + G   D  TYT +V   G+  +   +++LL +M   G  P + +YN L+ +Y R   + 
Sbjct: 277 EGGVVPDITTYTYLVDTFGKLNRLDKVSELLKEMASTGNVPEISSYNVLLEAYARIGNIE 336

Query: 413 EALDVFKQMQVVGC-----------------------------------EPDRVTYCTLI 437
           +A  VF+ MQ  GC                                   EPD  TY TLI
Sbjct: 337 DATGVFRLMQEAGCVPNAETYSILLGLYGKHGRYDEVRELFLEMKVSNTEPDAATYNTLI 396

Query: 438 DIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCI 497
           D+  + G+    + ++  M    + P+  TY  +I   GK G    A ++   M  +G I
Sbjct: 397 DVFGEGGYFKEVVTLFHDMAEENVEPNMETYEGLIFACGKGGLHDDAKKILLHMSEKGMI 456

Query: 498 PNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAV 557
           P+   Y  +I    +A  Y+ AL     M   G +P   TY+ ++ +    G   E EA+
Sbjct: 457 PSSKAYTGVIEAYGQAAMYEEALVTLNTMNEMGSKPTIETYNTLIYMFARGGLYKETEAI 516

Query: 558 FAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLR 617
             +M       +   +  +++ + + G   +A + Y  M ++ L P+  T  ++LS +  
Sbjct: 517 LLKMGDFGVARERDSFNGVIEGFRQGGQFEEAIKAYVEMEKSRLVPDERTLEAVLSVYCI 576

Query: 618 VGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEA---RSPYDMGFCHELMAVSGHPAH 674
            G + ++    Q +   G+ P++  Y ++L+   ++      Y++    E++       H
Sbjct: 577 AGLVDESVEQFQEIKASGILPNVMCYCMMLAVYAKSDRWNEAYEL--LDEMLTNRASNIH 634

Query: 675 MFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRESKRGLVDAVVDFLHKSGLKEEAGSVWE 734
             +  M     D  +    V    + ++SE         + +++ L   G KE A  V  
Sbjct: 635 QVIGQMIKGDFDDDSNWQMVEYVFDKLNSEGCGLGMRFYNTLLEALWWLGQKERAVRVLG 694

Query: 735 VAAQKNVYPDAVKEKGMSYWLINLHVMSDGTAVIALS 771
            A ++  +P+  ++  +  W +++H M +G+A  A+S
Sbjct: 695 EATKRGHFPELFRKSKL-VWSVDIHRMWEGSAYTAIS 730



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 94/364 (25%), Positives = 165/364 (45%), Gaps = 29/364 (7%)

Query: 269 ERFSKPSREMKIPAGLAPFSRHFASTGNVVESVSRILRQWKWGPLAEEALGNTNYSMDAY 328
           + F K +R  K+   L    +  ASTGNV E                  + + N  ++AY
Sbjct: 292 DTFGKLNRLDKVSELL----KEMASTGNVPE------------------ISSYNVLLEAY 329

Query: 329 QANQVLKQLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVR 388
                +  ++D T   G F  L ++AG   +  TY+ ++G+ G+  ++  + +L  +M  
Sbjct: 330 AR---IGNIEDAT---GVFR-LMQEAGCVPNAETYSILLGLYGKHGRYDEVRELFLEMKV 382

Query: 389 DGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDV 448
              +P+  TYN LI  +G   Y  E + +F  M     EP+  TY  LI    K G  D 
Sbjct: 383 SNTEPDAATYNTLIDVFGEGGYFKEVVTLFHDMAEENVEPNMETYEGLIFACGKGGLHDD 442

Query: 449 AMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIA 508
           A  +   M   G+ P +  Y+ +I   G+A   + A      M   G  P + TYN +I 
Sbjct: 443 AKKILLHMSEKGMIPSSKAYTGVIEAYGQAAMYEEALVTLNTMNEMGSKPTIETYNTLIY 502

Query: 509 LQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVP 568
           + A+   Y+    +   M + G   ++ +++ V+E     G  +EA   + EM +   VP
Sbjct: 503 MFARGGLYKETEAILLKMGDFGVARERDSFNGVIEGFRQGGQFEEAIKAYVEMEKSRLVP 562

Query: 569 DEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLL 628
           DE     ++ ++  AG V ++ E ++ +  +G+ PNV     +L+ + +  + ++AY LL
Sbjct: 563 DERTLEAVLSVYCIAGLVDESVEQFQEIKASGILPNVMCYCMMLAVYAKSDRWNEAYELL 622

Query: 629 QGML 632
             ML
Sbjct: 623 DEML 626



 Score = 87.0 bits (214), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 81/345 (23%), Positives = 147/345 (42%), Gaps = 16/345 (4%)

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQ-AAGLSPDTFTYSVIIN 473
           LDVFK    +        +  +    A+ G    ++ ++K MQ      P+   Y+++I+
Sbjct: 98  LDVFKNKLSLN------DFALVFKEFAQRGDWQRSLRLFKHMQRQIWCKPNEHIYTIMIS 151

Query: 474 CLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEP 533
            LG+ G L+    +F EM   G   ++ +Y  +I    +   Y+ +L+L   M+     P
Sbjct: 152 LLGREGLLEKCSDIFEEMGAHGVSRSVFSYTALINSYGRNGKYEVSLELLERMKKERVSP 211

Query: 534 DKVTYSIVMEVLGHCGYLDEAE-AVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEW 592
             +TY+ V+      G   E    +FAEMR +   PD   Y  L+      G   +A   
Sbjct: 212 SILTYNTVINSCARGGLDWEGLLGLFAEMRHEGIQPDIVTYNTLLCACSNRGLGDEAEMV 271

Query: 593 YEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTE 652
           +  M + G+ P++ T   L+  F ++ +L     LL+ M + G  P + +Y +LL     
Sbjct: 272 FRTMNEGGVVPDITTYTYLVDTFGKLNRLDKVSELLKEMASTGNVPEISSYNVLLEAYAR 331

Query: 653 ARSPYDMGFCHELMAVSG----HPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRES 708
             +  D      LM  +G       +  LL +         VR+    FLEM  S + E 
Sbjct: 332 IGNIEDATGVFRLMQEAGCVPNAETYSILLGLYGKHGRYDEVREL---FLEMKVS-NTEP 387

Query: 709 KRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAVKEKGMSY 753
                + ++D   + G  +E  +++   A++NV P+    +G+ +
Sbjct: 388 DAATYNTLIDVFGEGGYFKEVVTLFHDMAEENVEPNMETYEGLIF 432


>gi|357130063|ref|XP_003566676.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
           distachyon]
          Length = 822

 Score =  164 bits (415), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 106/403 (26%), Positives = 195/403 (48%), Gaps = 4/403 (0%)

Query: 345 GFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHS 404
           G F  + R+ G   D  T  + +  L +  +     +  D M   G +P++VTY+ L+H 
Sbjct: 318 GMFREMTRR-GLMPDIFTCNSYMSSLCKHGKSKEAAEFFDSMAAKGHKPDLVTYSVLLHG 376

Query: 405 YGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPD 464
           Y    Y+ + L++F  M+  G   D   Y  LID + K G +D AM ++ +MQ  G+ PD
Sbjct: 377 YAAEGYVVDMLNLFNSMEGNGIVADHSVYNILIDAYGKRGMMDEAMLIFTQMQERGVMPD 436

Query: 465 TFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYR 524
            +TY  +I    + G L  A   F +M+  G  P+ + YN +I       N   A +L  
Sbjct: 437 AWTYGTVIAAFSRMGRLADAMDKFNQMIAMGLKPDTIVYNSLIQGFCMHGNLVKAKELIS 496

Query: 525 DMQNAGF-EPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKA 583
           +M + G   P+ V ++ ++  L   G + EA+ +F  +      PD   +  L+D +G  
Sbjct: 497 EMMSRGIPRPNTVFFNSIINSLCKEGRVVEAQDIFDLVIHIGERPDVITFNSLIDGYGLV 556

Query: 584 GNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTY 643
           G + KA+   +AM+  G+ P+V T ++LL  + R G++ D   L + ML+ G+KP+  TY
Sbjct: 557 GKMEKAFGVLDAMISVGIEPDVVTYSALLDGYCRNGRIDDGLILFREMLSKGVKPTTITY 616

Query: 644 TLLL-SCCTEARSPYDMGFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMH 702
            ++L     + R+      CHE++  SG    +    +   G    N  D   +  + + 
Sbjct: 617 GIILHGLFNDGRTVGAKKMCHEMIE-SGTTMDISTCGIILGGLCRNNCDDEAIALFKKLG 675

Query: 703 SEDRESKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDA 745
           + + +    +++ ++D ++K   +EEA  +++  +   + P+A
Sbjct: 676 AMNVKFNIAIINTMIDAMYKVRKREEANELFDSISATGLVPNA 718



 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 130/507 (25%), Positives = 220/507 (43%), Gaps = 59/507 (11%)

Query: 321 TNYSMDAYQANQVLKQLQDHTVALGFFNWLRR---QAGFKHDEHTYTTMVGILGRARQFG 377
           T    D   AN +LK L     +    N L     + G + D  +Y+T++  L    +  
Sbjct: 148 TGLKTDVIVANILLKCLCHAKRSDDAVNVLLHRMPELGVEPDTISYSTVLKSLCEDSRSQ 207

Query: 378 AINKLLDQMVRD--GCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCT 435
               LL  MV+   GC PNVV+YN +IH + R   +++A ++F +M   G  PD VTY +
Sbjct: 208 RALDLLHTMVKKSGGCSPNVVSYNTVIHGFFREGEVSKACNLFHEMMQQGVVPDVVTYSS 267

Query: 436 LIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQG 495
            ID   KA  +D A  + ++M + G  PD  TY+ +I+     G  +    +F EM  +G
Sbjct: 268 YIDALCKARAMDKAELVLRQMISNGFEPDKVTYNCMIHGYSILGQWKETAGMFREMTRRG 327

Query: 496 CIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAE 555
            +P++ T N  ++   K    + A + +  M   G +PD VTYS+++      GY+ +  
Sbjct: 328 LMPDIFTCNSYMSSLCKHGKSKEAAEFFDSMAAKGHKPDLVTYSVLLHGYAAEGYVVDML 387

Query: 556 AVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAF 615
            +F  M     V D  VY +L+D +GK G + +A   +  M + G+ P+  T  ++++AF
Sbjct: 388 NLFNSMEGNGIVADHSVYNILIDAYGKRGMMDEAMLIFTQMQERGVMPDAWTYGTVIAAF 447

Query: 616 LRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGFCHELMAVSGHPAHM 675
            R+G+L+DA      M+ +GLKP    Y  L+            GFC     V       
Sbjct: 448 SRMGRLADAMDKFNQMIAMGLKPDTIVYNSLIQ-----------GFCMHGNLVKAKELIS 496

Query: 676 FLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRESKRGLVDAVVDFLHKSGLKEEAGSVWEV 735
            ++S   P P+                           +++++ L K G   EA  ++++
Sbjct: 497 EMMSRGIPRPNTV-----------------------FFNSIINSLCKEGRVVEAQDIFDL 533

Query: 736 AAQKNVYPDAVKEKGMSYWLINLHVMSDGTAVIALSRTLAWFRKQMLISGVGPSRIDIVT 795
                  PD          +I  + + DG  ++            M+  G+ P   D+VT
Sbjct: 534 VIHIGERPD----------VITFNSLIDGYGLVGKMEKAFGVLDAMISVGIEP---DVVT 580

Query: 796 ------GWGRRSRV-TGTSLVRQAVQE 815
                 G+ R  R+  G  L R+ + +
Sbjct: 581 YSALLDGYCRNGRIDDGLILFREMLSK 607



 Score =  119 bits (297), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 100/393 (25%), Positives = 165/393 (41%), Gaps = 46/393 (11%)

Query: 304 ILRQWKWGPLAEEALGNTNYSMDAYQANQVLKQLQDH---TVALGFFNWLRRQAGFKHDE 360
           IL QWK        +       D +  N  +  L  H     A  FF+ +  + G K D 
Sbjct: 309 ILGQWKETAGMFREMTRRGLMPDIFTCNSYMSSLCKHGKSKEAAEFFDSMAAK-GHKPDL 367

Query: 361 HTYTTMV-GILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFK 419
            TY+ ++ G          +N L + M  +G   +   YN LI +YG+   ++EA+ +F 
Sbjct: 368 VTYSVLLHGYAAEGYVVDMLN-LFNSMEGNGIVADHSVYNILIDAYGKRGMMDEAMLIFT 426

Query: 420 QMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSV--------- 470
           QMQ  G  PD  TY T+I   ++ G L  AMD + +M A GL PDT  Y+          
Sbjct: 427 QMQERGVMPDAWTYGTVIAAFSRMGRLADAMDKFNQMIAMGLKPDTIVYNSLIQGFCMHG 486

Query: 471 ---------------------------IINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTY 503
                                      IIN L K G +  A  +F  +++ G  P+++T+
Sbjct: 487 NLVKAKELISEMMSRGIPRPNTVFFNSIINSLCKEGRVVEAQDIFDLVIHIGERPDVITF 546

Query: 504 NIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHC--GYLDEAEAVFAEM 561
           N +I         + A  +   M + G EPD VTYS +++  G+C  G +D+   +F EM
Sbjct: 547 NSLIDGYGLVGKMEKAFGVLDAMISVGIEPDVVTYSALLD--GYCRNGRIDDGLILFREM 604

Query: 562 RRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQL 621
             K   P    YG+++      G    A +    M+++G   ++ TC  +L    R    
Sbjct: 605 LSKGVKPTTITYGIILHGLFNDGRTVGAKKMCHEMIESGTTMDISTCGIILGGLCRNNCD 664

Query: 622 SDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEAR 654
            +A  L + +  + +K ++     ++    + R
Sbjct: 665 DEAIALFKKLGAMNVKFNIAIINTMIDAMYKVR 697



 Score =  113 bits (283), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 66/267 (24%), Positives = 131/267 (49%)

Query: 382 LLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHA 441
           + D ++  G +P+V+T+N LI  YG    + +A  V   M  VG EPD VTY  L+D + 
Sbjct: 530 IFDLVIHIGERPDVITFNSLIDGYGLVGKMEKAFGVLDAMISVGIEPDVVTYSALLDGYC 589

Query: 442 KAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLV 501
           + G +D  + ++++M + G+ P T TY +I++ L   G    A ++  EM+  G   ++ 
Sbjct: 590 RNGRIDDGLILFREMLSKGVKPTTITYGIILHGLFNDGRTVGAKKMCHEMIESGTTMDIS 649

Query: 502 TYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEM 561
           T  I++    +      A+ L++ +     + +    + +++ +      +EA  +F  +
Sbjct: 650 TCGIILGGLCRNNCDDEAIALFKKLGAMNVKFNIAIINTMIDAMYKVRKREEANELFDSI 709

Query: 562 RRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQL 621
                VP+   YG+++    K G+V +A   +  M ++G  P+    N+++   L  G++
Sbjct: 710 SATGLVPNASTYGVMITNLLKEGSVEEADNMFSLMEKSGCAPSSRLLNNIIRVLLEKGEI 769

Query: 622 SDAYHLLQGMLNLGLKPSLQTYTLLLS 648
           S A + L  +    +     T +L+LS
Sbjct: 770 SKAGNYLSKVDGKTISLEASTASLMLS 796



 Score =  107 bits (267), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 90/378 (23%), Positives = 168/378 (44%), Gaps = 31/378 (8%)

Query: 291 FASTGNVVESVSRILRQWKWGPLAEEALGNTNYSMDAY-------QANQVLKQLQDHTV- 342
           +A+ G VV+ ++        G +A+ ++   N  +DAY       +A  +  Q+Q+  V 
Sbjct: 377 YAAEGYVVDMLNLFNSMEGNGIVADHSV--YNILIDAYGKRGMMDEAMLIFTQMQERGVM 434

Query: 343 --------ALGFFNWLRRQA------------GFKHDEHTYTTMVGILGRARQFGAINKL 382
                    +  F+ + R A            G K D   Y +++             +L
Sbjct: 435 PDAWTYGTVIAAFSRMGRLADAMDKFNQMIAMGLKPDTIVYNSLIQGFCMHGNLVKAKEL 494

Query: 383 LDQMVRDGC-QPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHA 441
           + +M+  G  +PN V +N +I+S  +   + EA D+F  +  +G  PD +T+ +LID + 
Sbjct: 495 ISEMMSRGIPRPNTVFFNSIINSLCKEGRVVEAQDIFDLVIHIGERPDVITFNSLIDGYG 554

Query: 442 KAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLV 501
             G ++ A  +   M + G+ PD  TYS +++   + G +     LF EM+++G  P  +
Sbjct: 555 LVGKMEKAFGVLDAMISVGIEPDVVTYSALLDGYCRNGRIDDGLILFREMLSKGVKPTTI 614

Query: 502 TYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEM 561
           TY I++           A K+  +M  +G   D  T  I++  L      DEA A+F ++
Sbjct: 615 TYGIILHGLFNDGRTVGAKKMCHEMIESGTTMDISTCGIILGGLCRNNCDDEAIALFKKL 674

Query: 562 RRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQL 621
              N   +  +   ++D   K     +A E ++++   GL PN  T   +++  L+ G +
Sbjct: 675 GAMNVKFNIAIINTMIDAMYKVRKREEANELFDSISATGLVPNASTYGVMITNLLKEGSV 734

Query: 622 SDAYHLLQGMLNLGLKPS 639
            +A ++   M   G  PS
Sbjct: 735 EEADNMFSLMEKSGCAPS 752



 Score = 99.8 bits (247), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 111/450 (24%), Positives = 169/450 (37%), Gaps = 114/450 (25%)

Query: 388 RDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKA---- 443
           RDG    V  +NR+     R      AL            P   TY  L+D   +A    
Sbjct: 92  RDGPSLAVALFNRICREEARPRV---AL------------PTVCTYNILMDCCCRAHRPT 136

Query: 444 -GFL-------------------------------DVAMDMYKKMQAAGLSPDTFTYSVI 471
            GF                                D    +  +M   G+ PDT +YS +
Sbjct: 137 VGFALFGRFLKTGLKTDVIVANILLKCLCHAKRSDDAVNVLLHRMPELGVEPDTISYSTV 196

Query: 472 INCLGKAGHLQAAHQLFCEMVNQ--GCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNA 529
           +  L +    Q A  L   MV +  GC PN+V+YN +I    +      A  L+ +M   
Sbjct: 197 LKSLCEDSRSQRALDLLHTMVKKSGGCSPNVVSYNTVIHGFFREGEVSKACNLFHEMMQQ 256

Query: 530 GFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKA 589
           G  PD VTYS  ++ L     +D+AE V  +M    + PD+  Y  ++  +   G  ++ 
Sbjct: 257 GVVPDVVTYSSYIDALCKARAMDKAELVLRQMISNGFEPDKVTYNCMIHGYSILGQWKET 316

Query: 590 WEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSC 649
              +  M + GL P++ TCNS +S+  + G+  +A      M   G KP L TY++LL  
Sbjct: 317 AGMFREMTRRGLMPDIFTCNSYMSSLCKHGKSKEAAEFFDSMAAKGHKPDLVTYSVLLH- 375

Query: 650 CTEARSPYDMGFCHELMAVSGHPAHMFLL--SMPSPGPDGQNVRDHVGSFLEMMHSEDRE 707
                     G+     A  G+   M  L  SM   G     V DH              
Sbjct: 376 ----------GY-----AAEGYVVDMLNLFNSMEGNGI----VADH-------------- 402

Query: 708 SKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAVKEKGMSYWLINLHVMSDGTAV 767
               + + ++D   K G+ +EA  ++    ++ V PDA        W       + GT +
Sbjct: 403 ---SVYNILIDAYGKRGMMDEAMLIFTQMQERGVMPDA--------W-------TYGTVI 444

Query: 768 IALSR------TLAWFRKQMLISGVGPSRI 791
            A SR       +  F  QM+  G+ P  I
Sbjct: 445 AAFSRMGRLADAMDKF-NQMIAMGLKPDTI 473



 Score = 77.4 bits (189), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 65/283 (22%), Positives = 126/283 (44%), Gaps = 43/283 (15%)

Query: 355 GFKHDEHTYTTMV---GILGRARQ-FGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANY 410
           G + D  T+ +++   G++G+  + FG    +LD M+  G +P+VVTY+ L+  Y R   
Sbjct: 538 GERPDVITFNSLIDGYGLVGKMEKAFG----VLDAMISVGIEPDVVTYSALLDGYCRNGR 593

Query: 411 LNEALDVFKQMQVVGCEPDRVTY-------------------C-------TLIDIHAKAG 444
           +++ L +F++M   G +P  +TY                   C       T +DI     
Sbjct: 594 IDDGLILFREMLSKGVKPTTITYGIILHGLFNDGRTVGAKKMCHEMIESGTTMDISTCGI 653

Query: 445 FL---------DVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQG 495
            L         D A+ ++KK+ A  +  +    + +I+ + K    + A++LF  +   G
Sbjct: 654 ILGGLCRNNCDDEAIALFKKLGAMNVKFNIAIINTMIDAMYKVRKREEANELFDSISATG 713

Query: 496 CIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAE 555
            +PN  TY +MI    K  + + A  ++  M+ +G  P     + ++ VL   G + +A 
Sbjct: 714 LVPNASTYGVMITNLLKEGSVEEADNMFSLMEKSGCAPSSRLLNNIIRVLLEKGEISKAG 773

Query: 556 AVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQ 598
              +++  K    +     L++ L+ + G  R+  +   AM Q
Sbjct: 774 NYLSKVDGKTISLEASTASLMLSLFSRKGKYREQIKSLPAMYQ 816


>gi|356517404|ref|XP_003527377.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
           mitochondrial-like [Glycine max]
          Length = 696

 Score =  164 bits (415), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 92/318 (28%), Positives = 158/318 (49%)

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
           +AG K DE TY+ ++     A ++ +   +L +M     +PN   Y+R++ SY       
Sbjct: 355 KAGVKPDEQTYSLLIDAYAHAGRWESARIVLKEMEASNVEPNSYVYSRILASYRDKGEWQ 414

Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
           ++  V K M+  G +PDR  Y  +ID   K   LD AM  +++M + G+ PDT T++ +I
Sbjct: 415 KSFQVLKDMKSNGVQPDRHFYNVMIDTFGKYNCLDHAMATFERMLSEGIRPDTVTWNTLI 474

Query: 473 NCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFE 532
           NC  K+G    A +LF EM  +G  P + TYNIMI    + + ++        MQ+ G  
Sbjct: 475 NCHCKSGRHNMAEELFGEMQQRGYSPCITTYNIMINSMGEQQRWEQVSLFLSKMQSQGLL 534

Query: 533 PDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEW 592
           P+ +TY+ +++V G  G   +A      ++   + P   +Y  L++ + + G    A   
Sbjct: 535 PNSITYTTLVDVYGKSGRFSDAIECLEVLKSTGFKPTSTMYNALINAYAQRGLSELAVNA 594

Query: 593 YEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTE 652
           +  M   GL P++   NSL++AF    + ++A+ +LQ M    ++P + TYT L+     
Sbjct: 595 FRLMTTEGLTPSLLALNSLINAFGEDRRDAEAFAVLQYMKENNIEPDVVTYTTLMKALIR 654

Query: 653 ARSPYDMGFCHELMAVSG 670
                 +   +E M  SG
Sbjct: 655 VEKFQKVPAVYEEMVTSG 672



 Score =  133 bits (334), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 90/351 (25%), Positives = 158/351 (45%), Gaps = 36/351 (10%)

Query: 339 DHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTY 398
           D T A+ F   + +  G      T   ++  LG + +      L +++  +G +P    Y
Sbjct: 272 DPTRAMRFLA-MAQSNGLNPKPSTLVAVILALGNSGRTHEAEALFEEIRENGSEPRTRAY 330

Query: 399 NRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQA 458
           N L+  Y +   L +A  V  +M+  G +PD  TY  LID +A AG  + A  + K+M+A
Sbjct: 331 NALLKGYVKTGSLKDAEFVVSEMEKAGVKPDEQTYSLLIDAYAHAGRWESARIVLKEMEA 390

Query: 459 AGLSPDTFTYS-----------------------------------VIINCLGKAGHLQA 483
           + + P+++ YS                                   V+I+  GK   L  
Sbjct: 391 SNVEPNSYVYSRILASYRDKGEWQKSFQVLKDMKSNGVQPDRHFYNVMIDTFGKYNCLDH 450

Query: 484 AHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVME 543
           A   F  M+++G  P+ VT+N +I    K+  +  A +L+ +MQ  G+ P   TY+I++ 
Sbjct: 451 AMATFERMLSEGIRPDTVTWNTLINCHCKSGRHNMAEELFGEMQQRGYSPCITTYNIMIN 510

Query: 544 VLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRP 603
            +G     ++     ++M+ +  +P+   Y  LVD++GK+G    A E  E +   G +P
Sbjct: 511 SMGEQQRWEQVSLFLSKMQSQGLLPNSITYTTLVDVYGKSGRFSDAIECLEVLKSTGFKP 570

Query: 604 NVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEAR 654
                N+L++A+ + G    A +  + M   GL PSL     L++   E R
Sbjct: 571 TSTMYNALINAYAQRGLSELAVNAFRLMTTEGLTPSLLALNSLINAFGEDR 621



 Score =  128 bits (321), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 75/284 (26%), Positives = 140/284 (49%), Gaps = 3/284 (1%)

Query: 369 ILGRARQFGAINK---LLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVG 425
           IL   R  G   K   +L  M  +G QP+   YN +I ++G+ N L+ A+  F++M   G
Sbjct: 403 ILASYRDKGEWQKSFQVLKDMKSNGVQPDRHFYNVMIDTFGKYNCLDHAMATFERMLSEG 462

Query: 426 CEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAH 485
             PD VT+ TLI+ H K+G  ++A +++ +MQ  G SP   TY+++IN +G+    +   
Sbjct: 463 IRPDTVTWNTLINCHCKSGRHNMAEELFGEMQQRGYSPCITTYNIMINSMGEQQRWEQVS 522

Query: 486 QLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVL 545
               +M +QG +PN +TY  ++ +  K+  +  A++    +++ GF+P    Y+ ++   
Sbjct: 523 LFLSKMQSQGLLPNSITYTTLVDVYGKSGRFSDAIECLEVLKSTGFKPTSTMYNALINAY 582

Query: 546 GHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNV 605
              G  + A   F  M  +   P       L++ +G+     +A+   + M +  + P+V
Sbjct: 583 AQRGLSELAVNAFRLMTTEGLTPSLLALNSLINAFGEDRRDAEAFAVLQYMKENNIEPDV 642

Query: 606 PTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSC 649
            T  +L+ A +RV +      + + M+  G  P  +   +L S 
Sbjct: 643 VTYTTLMKALIRVEKFQKVPAVYEEMVTSGCTPDRKARAMLRSA 686



 Score =  123 bits (308), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 116/465 (24%), Positives = 197/465 (42%), Gaps = 27/465 (5%)

Query: 362 TYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEAL--DVFK 419
           TY  ++G   R         L+ +M RDG QP+ V Y+ +I    R+N ++  +   ++ 
Sbjct: 187 TYNALIGACARNGDVEKALNLMSKMRRDGYQPDFVNYSSIIQYLTRSNKIDSPILQKLYT 246

Query: 420 QMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAG 479
           +++    E D      +I   +KAG    AM      Q+ GL+P   T   +I  LG +G
Sbjct: 247 EIETDKIEIDGHLMNDIILGFSKAGDPTRAMRFLAMAQSNGLNPKPSTLVAVILALGNSG 306

Query: 480 HLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYS 539
               A  LF E+   G  P    YN ++    K  + + A  +  +M+ AG +PD+ TYS
Sbjct: 307 RTHEAEALFEEIRENGSEPRTRAYNALLKGYVKTGSLKDAEFVVSEMEKAGVKPDEQTYS 366

Query: 540 IVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQA 599
           ++++   H G  + A  V  EM   N  P+  VY  ++  +   G  +K+++  + M   
Sbjct: 367 LLIDAYAHAGRWESARIVLKEMEASNVEPNSYVYSRILASYRDKGEWQKSFQVLKDMKSN 426

Query: 600 GLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSC-CTEARSPYD 658
           G++P+    N ++  F +   L  A    + ML+ G++P   T+  L++C C   R    
Sbjct: 427 GVQPDRHFYNVMIDTFGKYNCLDHAMATFERMLSEGIRPDTVTWNTLINCHCKSGRHNMA 486

Query: 659 MGFCHELMAVSGHPA----HMFLLSMPSPGPDGQNVR-DHVGSFLEMMHSEDRESKRGLV 713
                E+      P     ++ + SM      G+  R + V  FL  M S+         
Sbjct: 487 EELFGEMQQRGYSPCITTYNIMINSM------GEQQRWEQVSLFLSKMQSQGLLPNSITY 540

Query: 714 DAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAVKEKGMSYWLINLHVMSDGTAVIALSRT 773
             +VD   KSG   +A    EV       P +     M   LIN +    G + +A++  
Sbjct: 541 TTLVDVYGKSGRFSDAIECLEVLKSTGFKPTST----MYNALINAYAQR-GLSELAVNA- 594

Query: 774 LAWFRKQMLISGVGPSRI---DIVTGWGRRSRVTGTSLVRQAVQE 815
              FR  M   G+ PS +    ++  +G   R      V Q ++E
Sbjct: 595 ---FR-LMTTEGLTPSLLALNSLINAFGEDRRDAEAFAVLQYMKE 635



 Score =  118 bits (296), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 93/402 (23%), Positives = 176/402 (43%), Gaps = 10/402 (2%)

Query: 389 DGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDV 448
           +G  P   T   +I + G +   +EA  +F++++  G EP    Y  L+  + K G L  
Sbjct: 286 NGLNPKPSTLVAVILALGNSGRTHEAEALFEEIRENGSEPRTRAYNALLKGYVKTGSLKD 345

Query: 449 AMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIA 508
           A  +  +M+ AG+ PD  TYS++I+    AG  ++A  +  EM      PN   Y+ ++A
Sbjct: 346 AEFVVSEMEKAGVKPDEQTYSLLIDAYAHAGRWESARIVLKEMEASNVEPNSYVYSRILA 405

Query: 509 LQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVP 568
                  +Q + ++ +DM++ G +PD+  Y+++++  G    LD A A F  M  +   P
Sbjct: 406 SYRDKGEWQKSFQVLKDMKSNGVQPDRHFYNVMIDTFGKYNCLDHAMATFERMLSEGIRP 465

Query: 569 DEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLL 628
           D   +  L++   K+G    A E +  M Q G  P + T N ++++     +       L
Sbjct: 466 DTVTWNTLINCHCKSGRHNMAEELFGEMQQRGYSPCITTYNIMINSMGEQQRWEQVSLFL 525

Query: 629 QGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGFCHELMAVSGHPAHMFLLSMPSPGPDGQ 688
             M + GL P+  TYT L+    ++    D   C E++  +G      + +        +
Sbjct: 526 SKMQSQGLLPNSITYTTLVDVYGKSGRFSDAIECLEVLKSTGFKPTSTMYNALINAYAQR 585

Query: 689 NVRDHVGSFLEMMHSEDRESKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAVKE 748
            + +   +   +M +E        ++++++   +     EA +V +   + N+ PD V  
Sbjct: 586 GLSELAVNAFRLMTTEGLTPSLLALNSLINAFGEDRRDAEAFAVLQYMKENNIEPDVVTY 645

Query: 749 KGMSYWLINLHVMSDGTAVIALSRTLAWFRKQMLISGVGPSR 790
             +   LI +       AV           ++M+ SG  P R
Sbjct: 646 TTLMKALIRVEKFQKVPAVY----------EEMVTSGCTPDR 677



 Score =  103 bits (257), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 58/222 (26%), Positives = 104/222 (46%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           G + D  T+ T++    ++ +     +L  +M + G  P + TYN +I+S G      + 
Sbjct: 462 GIRPDTVTWNTLINCHCKSGRHNMAEELFGEMQQRGYSPCITTYNIMINSMGEQQRWEQV 521

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
                +MQ  G  P+ +TY TL+D++ K+G    A++  + +++ G  P +  Y+ +IN 
Sbjct: 522 SLFLSKMQSQGLLPNSITYTTLVDVYGKSGRFSDAIECLEVLKSTGFKPTSTMYNALINA 581

Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPD 534
             + G  + A   F  M  +G  P+L+  N +I    + R    A  + + M+    EPD
Sbjct: 582 YAQRGLSELAVNAFRLMTTEGLTPSLLALNSLINAFGEDRRDAEAFAVLQYMKENNIEPD 641

Query: 535 KVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLL 576
            VTY+ +M+ L       +  AV+ EM      PD     +L
Sbjct: 642 VVTYTTLMKALIRVEKFQKVPAVYEEMVTSGCTPDRKARAML 683



 Score = 92.0 bits (227), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 47/196 (23%), Positives = 95/196 (48%), Gaps = 1/196 (0%)

Query: 340 HTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYN 399
           H +A   F  ++ Q G+     TY  M+  +G  +++  ++  L +M   G  PN +TY 
Sbjct: 483 HNMAEELFGEMQ-QRGYSPCITTYNIMINSMGEQQRWEQVSLFLSKMQSQGLLPNSITYT 541

Query: 400 RLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAA 459
            L+  YG++   ++A++  + ++  G +P    Y  LI+ +A+ G  ++A++ ++ M   
Sbjct: 542 TLVDVYGKSGRFSDAIECLEVLKSTGFKPTSTMYNALINAYAQRGLSELAVNAFRLMTTE 601

Query: 460 GLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSA 519
           GL+P     + +IN  G+      A  +   M      P++VTY  ++    +   +Q  
Sbjct: 602 GLTPSLLALNSLINAFGEDRRDAEAFAVLQYMKENNIEPDVVTYTTLMKALIRVEKFQKV 661

Query: 520 LKLYRDMQNAGFEPDK 535
             +Y +M  +G  PD+
Sbjct: 662 PAVYEEMVTSGCTPDR 677



 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 71/260 (27%), Positives = 125/260 (48%), Gaps = 7/260 (2%)

Query: 391 CQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAM 450
           C    + Y+ LI++ GR+  L EA  +  Q QV+      +TY  LI   A+ G ++ A+
Sbjct: 151 CFSYELLYSILINALGRSEKLYEAF-LLSQRQVL----TPLTYNALIGACARNGDVEKAL 205

Query: 451 DMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAA--HQLFCEMVNQGCIPNLVTYNIMIA 508
           ++  KM+  G  PD   YS II  L ++  + +    +L+ E+       +    N +I 
Sbjct: 206 NLMSKMRRDGYQPDFVNYSSIIQYLTRSNKIDSPILQKLYTEIETDKIEIDGHLMNDIIL 265

Query: 509 LQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVP 568
             +KA +   A++     Q+ G  P   T   V+  LG+ G   EAEA+F E+R     P
Sbjct: 266 GFSKAGDPTRAMRFLAMAQSNGLNPKPSTLVAVILALGNSGRTHEAEALFEEIRENGSEP 325

Query: 569 DEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLL 628
               Y  L+  + K G+++ A      M +AG++P+  T + L+ A+   G+   A  +L
Sbjct: 326 RTRAYNALLKGYVKTGSLKDAEFVVSEMEKAGVKPDEQTYSLLIDAYAHAGRWESARIVL 385

Query: 629 QGMLNLGLKPSLQTYTLLLS 648
           + M    ++P+   Y+ +L+
Sbjct: 386 KEMEASNVEPNSYVYSRILA 405



 Score = 73.2 bits (178), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 79/336 (23%), Positives = 138/336 (41%), Gaps = 54/336 (16%)

Query: 468 YSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQ 527
           YS++IN LG++  L  A      +++Q  +   +TYN +I   A+  + + AL L   M+
Sbjct: 158 YSILINALGRSEKLYEAF-----LLSQRQVLTPLTYNALIGACARNGDVEKALNLMSKMR 212

Query: 528 NAGFEPDKVTYSIVMEVLGHCGYLD-----------EAEAV------------------- 557
             G++PD V YS +++ L     +D           E + +                   
Sbjct: 213 RDGYQPDFVNYSSIIQYLTRSNKIDSPILQKLYTEIETDKIEIDGHLMNDIILGFSKAGD 272

Query: 558 ------FAEMRRKNWVPDEPVYGLLVDL-WGKAGNVRKAWEWYEAMLQAGLRPNVPTCNS 610
                 F  M + N +  +P   + V L  G +G   +A   +E + + G  P     N+
Sbjct: 273 PTRAMRFLAMAQSNGLNPKPSTLVAVILALGNSGRTHEAEALFEEIRENGSEPRTRAYNA 332

Query: 611 LLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEA-RSPYDMGFCHELMAVS 669
           LL  +++ G L DA  ++  M   G+KP  QTY+LL+     A R         E+ A +
Sbjct: 333 LLKGYVKTGSLKDAEFVVSEMEKAGVKPDEQTYSLLIDAYAHAGRWESARIVLKEMEASN 392

Query: 670 GHP-AHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRESKRGLVDAVVDFLHKSGLKEE 728
             P ++++   + S    G+  +      L+ M S   +  R   + ++D   K    + 
Sbjct: 393 VEPNSYVYSRILASYRDKGEWQKSF--QVLKDMKSNGVQPDRHFYNVMIDTFGKYNCLDH 450

Query: 729 AGSVWEVAAQKNVYPDAVKEKGMSYW--LINLHVMS 762
           A + +E    + + PD V       W  LIN H  S
Sbjct: 451 AMATFERMLSEGIRPDTVT------WNTLINCHCKS 480


>gi|297737369|emb|CBI26570.3| unnamed protein product [Vitis vinifera]
          Length = 1042

 Score =  164 bits (415), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 98/345 (28%), Positives = 181/345 (52%), Gaps = 5/345 (1%)

Query: 333 VLKQLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQ 392
           VL +     +A+  F   R +A   +    Y  M+G+  R  +F  + +LLD M   GC+
Sbjct: 172 VLGKANQEALAVEIFA--RAEAASGNTVQVYNAMMGVYARTGRFTKVQELLDLMRSRGCE 229

Query: 393 PNVVTYNRLIHSYGRANYL--NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAM 450
           P++V++N LI++  ++  +  N A+++  +++  G +PD +TY TLI   ++   L+ A+
Sbjct: 230 PDLVSFNTLINARLKSGTMVTNLAIELLNEVRRSGIQPDIITYNTLISACSRESNLEEAV 289

Query: 451 DMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQ 510
            +Y  M A    PD +TY+ +I+  G+ G  + A +LF ++ ++G +P+ VTYN ++   
Sbjct: 290 KVYNDMVAHRCQPDLWTYNAMISVYGRCGMSREAGRLFKDLESKGFLPDAVTYNSLLYAF 349

Query: 511 AKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDE 570
           A+  N     ++  DM   GF  D++TY+ ++ + G  G  D A  ++++M+     PD 
Sbjct: 350 AREGNVDKVKEICEDMVKMGFGKDEMTYNTIIHMYGKRGQHDLAFQLYSDMKLSGRSPDA 409

Query: 571 PVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQG 630
             Y +L+D  GKA  +++A E    ML A ++P + T ++L+  + + G+  +A      
Sbjct: 410 VTYTVLIDSLGKANMIKEAAEVMSEMLNARVKPTLRTFSALICGYAKAGKRVEAEETFDC 469

Query: 631 MLNLGLKPSLQTYTLLLSCCTEA-RSPYDMGFCHELMAVSGHPAH 674
           ML  G+KP    Y+++L        S   M    E++  S  P H
Sbjct: 470 MLRSGIKPDHLAYSVMLDILLRFNESGKAMKLYQEMVLHSFKPDH 514



 Score =  150 bits (379), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 96/342 (28%), Positives = 168/342 (49%), Gaps = 17/342 (4%)

Query: 314 AEEALGNT----NYSMDAYQANQVLKQLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGI 369
           AE A GNT    N  M  Y       ++Q+          L R  G + D  ++ T++  
Sbjct: 189 AEAASGNTVQVYNAMMGVYARTGRFTKVQELLD-------LMRSRGCEPDLVSFNTLIN- 240

Query: 370 LGRARQFGAIN----KLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVG 425
             R +    +     +LL+++ R G QP+++TYN LI +  R + L EA+ V+  M    
Sbjct: 241 -ARLKSGTMVTNLAIELLNEVRRSGIQPDIITYNTLISACSRESNLEEAVKVYNDMVAHR 299

Query: 426 CEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAH 485
           C+PD  TY  +I ++ + G    A  ++K +++ G  PD  TY+ ++    + G++    
Sbjct: 300 CQPDLWTYNAMISVYGRCGMSREAGRLFKDLESKGFLPDAVTYNSLLYAFAREGNVDKVK 359

Query: 486 QLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVL 545
           ++  +MV  G   + +TYN +I +  K   +  A +LY DM+ +G  PD VTY+++++ L
Sbjct: 360 EICEDMVKMGFGKDEMTYNTIIHMYGKRGQHDLAFQLYSDMKLSGRSPDAVTYTVLIDSL 419

Query: 546 GHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNV 605
           G    + EA  V +EM      P    +  L+  + KAG   +A E ++ ML++G++P+ 
Sbjct: 420 GKANMIKEAAEVMSEMLNARVKPTLRTFSALICGYAKAGKRVEAEETFDCMLRSGIKPDH 479

Query: 606 PTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
              + +L   LR  +   A  L Q M+    KP    Y ++L
Sbjct: 480 LAYSVMLDILLRFNESGKAMKLYQEMVLHSFKPDHALYEVML 521



 Score =  133 bits (335), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 86/293 (29%), Positives = 140/293 (47%), Gaps = 1/293 (0%)

Query: 342 VALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRL 401
           +A+   N +RR +G + D  TY T++    R        K+ + MV   CQP++ TYN +
Sbjct: 252 LAIELLNEVRR-SGIQPDIITYNTLISACSRESNLEEAVKVYNDMVAHRCQPDLWTYNAM 310

Query: 402 IHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGL 461
           I  YGR     EA  +FK ++  G  PD VTY +L+   A+ G +D   ++ + M   G 
Sbjct: 311 ISVYGRCGMSREAGRLFKDLESKGFLPDAVTYNSLLYAFAREGNVDKVKEICEDMVKMGF 370

Query: 462 SPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALK 521
             D  TY+ II+  GK G    A QL+ +M   G  P+ VTY ++I    KA   + A +
Sbjct: 371 GKDEMTYNTIIHMYGKRGQHDLAFQLYSDMKLSGRSPDAVTYTVLIDSLGKANMIKEAAE 430

Query: 522 LYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWG 581
           +  +M NA  +P   T+S ++      G   EAE  F  M R    PD   Y +++D+  
Sbjct: 431 VMSEMLNARVKPTLRTFSALICGYAKAGKRVEAEETFDCMLRSGIKPDHLAYSVMLDILL 490

Query: 582 KAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNL 634
           +     KA + Y+ M+    +P+      +L    +  +  D + +++ M  L
Sbjct: 491 RFNESGKAMKLYQEMVLHSFKPDHALYEVMLRVLGKENREEDVHKVVKDMEEL 543



 Score =  124 bits (311), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 128/567 (22%), Positives = 227/567 (40%), Gaps = 82/567 (14%)

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
           + GF  DE TY T++ + G+  Q     +L   M   G  P+ VTY  LI S G+AN + 
Sbjct: 367 KMGFGKDEMTYNTIIHMYGKRGQHDLAFQLYSDMKLSGRSPDAVTYTVLIDSLGKANMIK 426

Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
           EA +V  +M     +P   T+  LI  +AKAG    A + +  M  +G+ PD   YSV++
Sbjct: 427 EAAEVMSEMLNARVKPTLRTFSALICGYAKAGKRVEAEETFDCMLRSGIKPDHLAYSVML 486

Query: 473 NCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFE 532
           + L +      A +L+ EMV     P+   Y +M+ +  K    +   K+ +DM+     
Sbjct: 487 DILLRFNESGKAMKLYQEMVLHSFKPDHALYEVMLRVLGKENREEDVHKVVKDMEELCGM 546

Query: 533 PDKVTYSIVMEVLGHC---------------------------GYLDEAEAVFAEMRRKN 565
             +V  SI+  V G C                           G     E +F  +  K 
Sbjct: 547 NSQVICSIL--VKGECFDHAANMLRLAISQGCELDQYGKARDFGLFCGTEELFEGLLSKE 604

Query: 566 WVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCN---------------- 609
              D   Y +++ ++  +GN  KA +    M +AG+ P + T +                
Sbjct: 605 CKLDRSFYHIMMKMFRNSGNHSKAEKLLGVMKEAGVEPTIATMHLLMVSYSGSGQPEEAE 664

Query: 610 -------------------SLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCC 650
                              S++ A+L+ G  + A   L  M   GL+P  + +T  +   
Sbjct: 665 KVLDNLKVEGLPLSTLPYSSVIDAYLKNGDHNVAIQKLMEMKKDGLEPDHRIWTCFVRAA 724

Query: 651 TEARSPYDMGFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRESKR 710
           + ++   +     + +  +G    + LL+  S      ++   V + LE +   +  +  
Sbjct: 725 SLSQHTSEAIVLLKALRDTGFDLPIRLLTEKS-----DSLVSEVDNCLEKLGPLEDNAAF 779

Query: 711 GLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAVKEKGMSYWLINLHVMSDGTAVIAL 770
             V+A+ D L    L+  A  V+++A ++++Y   V       W  +   MS G+A++ L
Sbjct: 780 NFVNALEDLLWAFELRATASWVFQLAVKRSIYRHDVFRVAEKDWGADFRKMSAGSALVGL 839

Query: 771 SRTLA-------WFRKQMLISG--VGPSRIDIVTGWGRRSRVTGTSLVRQAVQELLHMFS 821
           +  L        +F +   + G  + P  + ++TG    + V+  S ++  + E+     
Sbjct: 840 TLWLDHMQAKYFYFWQDASLQGYPLSPKSVVLITGTAEYNMVSLNSTLKAFLWEM----G 895

Query: 822 FPFFTENGNSGCFVGCGEPLNKWLLQS 848
            PF      SG  V     L  WL  S
Sbjct: 896 SPFLPCKTRSGLLVAKAHSLRMWLKDS 922



 Score =  116 bits (291), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 73/269 (27%), Positives = 134/269 (49%), Gaps = 3/269 (1%)

Query: 387 VRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFL 446
           +R    PN      ++   G+AN    A+++F + +       +V Y  ++ ++A+ G  
Sbjct: 155 LRHWYSPNARMLATILSVLGKANQEALAVEIFARAEAASGNTVQV-YNAMMGVYARTGRF 213

Query: 447 DVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHL--QAAHQLFCEMVNQGCIPNLVTYN 504
               ++   M++ G  PD  +++ +IN   K+G +    A +L  E+   G  P+++TYN
Sbjct: 214 TKVQELLDLMRSRGCEPDLVSFNTLINARLKSGTMVTNLAIELLNEVRRSGIQPDIITYN 273

Query: 505 IMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRK 564
            +I+  ++  N + A+K+Y DM     +PD  TY+ ++ V G CG   EA  +F ++  K
Sbjct: 274 TLISACSRESNLEEAVKVYNDMVAHRCQPDLWTYNAMISVYGRCGMSREAGRLFKDLESK 333

Query: 565 NWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDA 624
            ++PD   Y  L+  + + GNV K  E  E M++ G   +  T N+++  + + GQ   A
Sbjct: 334 GFLPDAVTYNSLLYAFAREGNVDKVKEICEDMVKMGFGKDEMTYNTIIHMYGKRGQHDLA 393

Query: 625 YHLLQGMLNLGLKPSLQTYTLLLSCCTEA 653
           + L   M   G  P   TYT+L+    +A
Sbjct: 394 FQLYSDMKLSGRSPDAVTYTVLIDSLGKA 422



 Score =  116 bits (291), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 86/343 (25%), Positives = 151/343 (44%), Gaps = 25/343 (7%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           GF  D  TY +++    R      + ++ + MV+ G   + +TYN +IH YG+    + A
Sbjct: 334 GFLPDAVTYNSLLYAFAREGNVDKVKEICEDMVKMGFGKDEMTYNTIIHMYGKRGQHDLA 393

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
             ++  M++ G  PD VTY  LID   KA  +  A ++  +M  A + P   T+S +I  
Sbjct: 394 FQLYSDMKLSGRSPDAVTYTVLIDSLGKANMIKEAAEVMSEMLNARVKPTLRTFSALICG 453

Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPD 534
             KAG    A + F  M+  G  P+ + Y++M+ +  +      A+KLY++M    F+PD
Sbjct: 454 YAKAGKRVEAEETFDCMLRSGIKPDHLAYSVMLDILLRFNESGKAMKLYQEMVLHSFKPD 513

Query: 535 KVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLV----------------- 577
              Y +++ VLG     ++   V  +M     +  + +  +LV                 
Sbjct: 514 HALYEVMLRVLGKENREEDVHKVVKDMEELCGMNSQVICSILVKGECFDHAANMLRLAIS 573

Query: 578 -----DLWGKA---GNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQ 629
                D +GKA   G      E +E +L    + +    + ++  F   G  S A  LL 
Sbjct: 574 QGCELDQYGKARDFGLFCGTEELFEGLLSKECKLDRSFYHIMMKMFRNSGNHSKAEKLLG 633

Query: 630 GMLNLGLKPSLQTYTLLLSCCTEARSPYDMGFCHELMAVSGHP 672
            M   G++P++ T  LL+   + +  P +     + + V G P
Sbjct: 634 VMKEAGVEPTIATMHLLMVSYSGSGQPEEAEKVLDNLKVEGLP 676


>gi|147778634|emb|CAN76112.1| hypothetical protein VITISV_005527 [Vitis vinifera]
          Length = 1494

 Score =  164 bits (415), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 98/345 (28%), Positives = 181/345 (52%), Gaps = 5/345 (1%)

Query: 333 VLKQLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQ 392
           VL +     +A+  F   R +A   +    Y  M+G+  R  +F  + +LLD M   GC+
Sbjct: 229 VLGKANQEALAVEIFA--RAEAAXGNTVQVYNAMMGVYARTGRFTKVQELLDLMRSRGCE 286

Query: 393 PNVVTYNRLIHSYGRANYL--NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAM 450
           P++V++N LI++  ++  +  N A+++  +++  G +PD +TY TLI   ++   L+ A+
Sbjct: 287 PDLVSFNTLINARLKSGTMVTNLAIELLNEVRRSGIQPDIITYNTLISACSRESNLEEAV 346

Query: 451 DMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQ 510
            +Y  M A    PD +TY+ +I+  G+ G  + A +LF ++ ++G +P+ VTYN ++   
Sbjct: 347 KVYNDMVAHRCQPDLWTYNAMISVYGRCGMSREAGRLFKDLESKGFLPDAVTYNSLLYAF 406

Query: 511 AKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDE 570
           A+  N     ++  DM   GF  D++TY+ ++ + G  G  D A  ++++M+     PD 
Sbjct: 407 AREGNVDKVKEICEDMVKMGFGKDEMTYNTIIHMYGKRGQHDLAFQLYSDMKLSGRSPDA 466

Query: 571 PVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQG 630
             Y +L+D  GKA  +++A E    ML A ++P + T ++L+  + + G+  +A      
Sbjct: 467 VTYTVLIDSLGKANMIKEAAEVMSEMLNAXVKPTLRTFSALICGYAKAGKRVEAEETFDC 526

Query: 631 MLNLGLKPSLQTYTLLLSCCTEA-RSPYDMGFCHELMAVSGHPAH 674
           ML  G+KP    Y+++L        S   M    E++  S  P H
Sbjct: 527 MLRSGIKPDHLAYSVMLDILLRFNESGKAMKLYQEMVLHSFKPDH 571



 Score =  149 bits (377), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 96/342 (28%), Positives = 168/342 (49%), Gaps = 17/342 (4%)

Query: 314 AEEALGNT----NYSMDAYQANQVLKQLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGI 369
           AE A GNT    N  M  Y       ++Q+          L R  G + D  ++ T++  
Sbjct: 246 AEAAXGNTVQVYNAMMGVYARTGRFTKVQE-------LLDLMRSRGCEPDLVSFNTLIN- 297

Query: 370 LGRARQFGAIN----KLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVG 425
             R +    +     +LL+++ R G QP+++TYN LI +  R + L EA+ V+  M    
Sbjct: 298 -ARLKSGTMVTNLAIELLNEVRRSGIQPDIITYNTLISACSRESNLEEAVKVYNDMVAHR 356

Query: 426 CEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAH 485
           C+PD  TY  +I ++ + G    A  ++K +++ G  PD  TY+ ++    + G++    
Sbjct: 357 CQPDLWTYNAMISVYGRCGMSREAGRLFKDLESKGFLPDAVTYNSLLYAFAREGNVDKVK 416

Query: 486 QLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVL 545
           ++  +MV  G   + +TYN +I +  K   +  A +LY DM+ +G  PD VTY+++++ L
Sbjct: 417 EICEDMVKMGFGKDEMTYNTIIHMYGKRGQHDLAFQLYSDMKLSGRSPDAVTYTVLIDSL 476

Query: 546 GHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNV 605
           G    + EA  V +EM      P    +  L+  + KAG   +A E ++ ML++G++P+ 
Sbjct: 477 GKANMIKEAAEVMSEMLNAXVKPTLRTFSALICGYAKAGKRVEAEETFDCMLRSGIKPDH 536

Query: 606 PTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
              + +L   LR  +   A  L Q M+    KP    Y ++L
Sbjct: 537 LAYSVMLDILLRFNESGKAMKLYQEMVLHSFKPDHALYEVML 578



 Score =  133 bits (334), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 86/293 (29%), Positives = 140/293 (47%), Gaps = 1/293 (0%)

Query: 342 VALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRL 401
           +A+   N +RR +G + D  TY T++    R        K+ + MV   CQP++ TYN +
Sbjct: 309 LAIELLNEVRR-SGIQPDIITYNTLISACSRESNLEEAVKVYNDMVAHRCQPDLWTYNAM 367

Query: 402 IHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGL 461
           I  YGR     EA  +FK ++  G  PD VTY +L+   A+ G +D   ++ + M   G 
Sbjct: 368 ISVYGRCGMSREAGRLFKDLESKGFLPDAVTYNSLLYAFAREGNVDKVKEICEDMVKMGF 427

Query: 462 SPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALK 521
             D  TY+ II+  GK G    A QL+ +M   G  P+ VTY ++I    KA   + A +
Sbjct: 428 GKDEMTYNTIIHMYGKRGQHDLAFQLYSDMKLSGRSPDAVTYTVLIDSLGKANMIKEAAE 487

Query: 522 LYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWG 581
           +  +M NA  +P   T+S ++      G   EAE  F  M R    PD   Y +++D+  
Sbjct: 488 VMSEMLNAXVKPTLRTFSALICGYAKAGKRVEAEETFDCMLRSGIKPDHLAYSVMLDILL 547

Query: 582 KAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNL 634
           +     KA + Y+ M+    +P+      +L    +  +  D + +++ M  L
Sbjct: 548 RFNESGKAMKLYQEMVLHSFKPDHALYEVMLRVLGKENREEDVHKVVKDMEEL 600



 Score =  115 bits (289), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 73/269 (27%), Positives = 134/269 (49%), Gaps = 3/269 (1%)

Query: 387 VRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFL 446
           +R    PN      ++   G+AN    A+++F + +       +V Y  ++ ++A+ G  
Sbjct: 212 LRHWYSPNARMLATILSVLGKANQEALAVEIFARAEAAXGNTVQV-YNAMMGVYARTGRF 270

Query: 447 DVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHL--QAAHQLFCEMVNQGCIPNLVTYN 504
               ++   M++ G  PD  +++ +IN   K+G +    A +L  E+   G  P+++TYN
Sbjct: 271 TKVQELLDLMRSRGCEPDLVSFNTLINARLKSGTMVTNLAIELLNEVRRSGIQPDIITYN 330

Query: 505 IMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRK 564
            +I+  ++  N + A+K+Y DM     +PD  TY+ ++ V G CG   EA  +F ++  K
Sbjct: 331 TLISACSRESNLEEAVKVYNDMVAHRCQPDLWTYNAMISVYGRCGMSREAGRLFKDLESK 390

Query: 565 NWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDA 624
            ++PD   Y  L+  + + GNV K  E  E M++ G   +  T N+++  + + GQ   A
Sbjct: 391 GFLPDAVTYNSLLYAFAREGNVDKVKEICEDMVKMGFGKDEMTYNTIIHMYGKRGQHDLA 450

Query: 625 YHLLQGMLNLGLKPSLQTYTLLLSCCTEA 653
           + L   M   G  P   TYT+L+    +A
Sbjct: 451 FQLYSDMKLSGRSPDAVTYTVLIDSLGKA 479



 Score =  111 bits (277), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 108/522 (20%), Positives = 210/522 (40%), Gaps = 73/522 (13%)

Query: 352  RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
            + AG+    H Y  M+G+L + ++   +  ++ +M     +P++  +N ++  Y      
Sbjct: 911  KAAGYFPTMHLYRIMIGLLAKGKRVRDVEAMVSEMEVAXFKPDLSIWNSVLKLYTGIGDF 970

Query: 412  NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
             +   V++ +Q  G +PD  TY TLI ++ +    +  + +  +M+  GL P   TY  +
Sbjct: 971  KKTGQVYQLIQEAGLKPDEDTYNTLILMYCRDRRPEEGLSLMHEMRRVGLEPKLDTYKSL 1030

Query: 472  INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF 531
            I+  GK   ++ A +LF  ++++ C  +   Y+IM+ +   + N+  A KL   M+ AG 
Sbjct: 1031 ISAFGKLQMVEQAEELFEGLLSKECKLDRSFYHIMMKMFRNSGNHSKAEKLLGVMKEAGV 1090

Query: 532  EPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWE 591
            EP   T  ++M      G  +EAE V   ++ +        Y  ++D + K G+   A +
Sbjct: 1091 EPTIATMHLLMVSYSGSGQPEEAEKVLDNLKVEGLPLSTLPYSSVIDAYLKNGDHNVAIQ 1150

Query: 592  WYEAMLQAGLRPNVPTCNSLLSAFLRVGQL----SDAYHLLQGMLNLGLKPSLQTYTLLL 647
                M + GL P+    + + + F+R   L    S+A  LL+ + + G    ++  T   
Sbjct: 1151 KLMEMKKDGLEPD----HRIWTCFVRAASLSQHTSEAIVLLKALRDTGFDLPIRLLT--- 1203

Query: 648  SCCTEARSPYDMGFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRE 707
                                                     ++   V + LE +   +  
Sbjct: 1204 -------------------------------------EKSDSLVSEVDNCLEKLGPLEDN 1226

Query: 708  SKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAVKEKGMSYWLINLHVMSDGTAV 767
            +    V+A+ D L    L+  A  V+++A ++++Y   V       W  +   MS G+A+
Sbjct: 1227 AAFNFVNALEDLLWAFELRATASWVFQLAVKRSIYRHDVFRVAEKDWGADFRKMSAGSAL 1286

Query: 768  IALSRTLAWFRKQMLIS---------------------GVGPSRIDIVTGWGRRSRVTGT 806
            + L+  L   +   LI+                      + P  + ++TG    + V+  
Sbjct: 1287 VGLTLWLDHMQASFLITIFVQLMEEYFYFWQDASLQGYPLSPKSVVLITGTAEYNMVSLN 1346

Query: 807  SLVRQAVQELLHMFSFPFFTENGNSGCFVGCGEPLNKWLLQS 848
            S ++  + E+      PF      SG  V     L  WL  S
Sbjct: 1347 STLKAFLWEM----GSPFLPCKTRSGLLVAKAHSLRMWLKDS 1384



 Score =  107 bits (267), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 62/223 (27%), Positives = 109/223 (48%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           GF  D  TY +++    R      + ++ + MV+ G   + +TYN +IH YG+    + A
Sbjct: 391 GFLPDAVTYNSLLYAFAREGNVDKVKEICEDMVKMGFGKDEMTYNTIIHMYGKRGQHDLA 450

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
             ++  M++ G  PD VTY  LID   KA  +  A ++  +M  A + P   T+S +I  
Sbjct: 451 FQLYSDMKLSGRSPDAVTYTVLIDSLGKANMIKEAAEVMSEMLNAXVKPTLRTFSALICG 510

Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPD 534
             KAG    A + F  M+  G  P+ + Y++M+ +  +      A+KLY++M    F+PD
Sbjct: 511 YAKAGKRVEAEETFDCMLRSGIKPDHLAYSVMLDILLRFNESGKAMKLYQEMVLHSFKPD 570

Query: 535 KVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLV 577
              Y +++ VLG     ++   V  +M     +  + +  +LV
Sbjct: 571 HALYEVMLRVLGKENREEDVHKVVKDMEELCGMNSQVICSILV 613



 Score = 98.6 bits (244), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 84/308 (27%), Positives = 135/308 (43%), Gaps = 19/308 (6%)

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
           + GF  DE TY T++ + G+  Q     +L   M   G  P+ VTY  LI S G+AN + 
Sbjct: 424 KMGFGKDEMTYNTIIHMYGKRGQHDLAFQLYSDMKLSGRSPDAVTYTVLIDSLGKANMIK 483

Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
           EA +V  +M     +P   T+  LI  +AKAG    A + +  M  +G+ PD   YSV++
Sbjct: 484 EAAEVMSEMLNAXVKPTLRTFSALICGYAKAGKRVEAEETFDCMLRSGIKPDHLAYSVML 543

Query: 473 NCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFE 532
           + L +      A +L+ EMV     P+   Y +M+ +  K    +   K+ +DM+     
Sbjct: 544 DILLRFNESGKAMKLYQEMVLHSFKPDHALYEVMLRVLGKENREEDVHKVVKDMEELCGM 603

Query: 533 PDKVTYSIVMEVLGHCGYLDEAEAVF-------AEMRRKNWVPDEPVYGLLVDLWGKAGN 585
             +V  SI+  V G C   D A  +         E+ R+N +        ++  +G +G 
Sbjct: 604 NSQVICSIL--VKGEC--FDHAANMLRLAISQGCELDRENLLS-------ILGSYGSSGR 652

Query: 586 VRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLK-PSLQTYT 644
             +A E  + + +     +     +L+    +  QL DA        + GL   S   Y 
Sbjct: 653 HLEARELLDFLREHSSGSHQLINEALIIMLCKAHQLGDALREYGKARDFGLFCGSFTMYE 712

Query: 645 LLLSCCTE 652
            LL CC E
Sbjct: 713 SLLLCCEE 720



 Score = 96.3 bits (238), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 72/298 (24%), Positives = 139/298 (46%), Gaps = 1/298 (0%)

Query: 352  RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQ-PNVVTYNRLIHSYGRANY 410
            R  G +  +H Y +MV    +       + L+DQ    G    +V  +  +I +YG+   
Sbjct: 735  RFYGVEPSDHLYRSMVVTYCKMGFPETAHYLIDQAEEKGLLFDDVSIHTGVIEAYGKLKL 794

Query: 411  LNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSV 470
              +A  +   ++      DR  +  LI  +A +G  + A  ++  M   G SP   + + 
Sbjct: 795  WQKAESLVGSLRQKCTMVDRKVWNALIHAYAASGCYERARAIFNTMMRDGPSPTVDSVNG 854

Query: 471  IINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAG 530
            ++  L   G L   + +  E+ + G   +  +  +M+   A A N     K+Y+ M+ AG
Sbjct: 855  LMQALIVDGRLDELYVVIQELQDMGFKISKSSITLMLDAFAHAGNIFEVKKIYQGMKAAG 914

Query: 531  FEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAW 590
            + P    Y I++ +L     + + EA+ +EM    + PD  ++  ++ L+   G+ +K  
Sbjct: 915  YFPTMHLYRIMIGLLAKGKRVRDVEAMVSEMEVAXFKPDLSIWNSVLKLYTGIGDFKKTG 974

Query: 591  EWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
            + Y+ + +AGL+P+  T N+L+  + R  +  +   L+  M  +GL+P L TY  L+S
Sbjct: 975  QVYQLIQEAGLKPDEDTYNTLILMYCRDRRPEEGLSLMHEMRRVGLEPKLDTYKSLIS 1032



 Score = 87.0 bits (214), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 61/289 (21%), Positives = 125/289 (43%)

Query: 359  DEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVF 418
            D   +T ++   G+ + +     L+  + +     +   +N LIH+Y  +     A  +F
Sbjct: 778  DVSIHTGVIEAYGKLKLWQKAESLVGSLRQKCTMVDRKVWNALIHAYAASGCYERARAIF 837

Query: 419  KQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKA 478
              M   G  P   +   L+      G LD    + +++Q  G      + +++++    A
Sbjct: 838  NTMMRDGPSPTVDSVNGLMQALIVDGRLDELYVVIQELQDMGFKISKSSITLMLDAFAHA 897

Query: 479  GHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTY 538
            G++    +++  M   G  P +  Y IMI L AK +  +    +  +M+ A F+PD   +
Sbjct: 898  GNIFEVKKIYQGMKAAGYFPTMHLYRIMIGLLAKGKRVRDVEAMVSEMEVAXFKPDLSIW 957

Query: 539  SIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQ 598
            + V+++    G   +   V+  ++     PDE  Y  L+ ++ +     +       M +
Sbjct: 958  NSVLKLYTGIGDFKKTGQVYQLIQEAGLKPDEDTYNTLILMYCRDRRPEEGLSLMHEMRR 1017

Query: 599  AGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
             GL P + T  SL+SAF ++  +  A  L +G+L+   K     Y +++
Sbjct: 1018 VGLEPKLDTYKSLISAFGKLQMVEQAEELFEGLLSKECKLDRSFYHIMM 1066



 Score = 86.7 bits (213), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 78/371 (21%), Positives = 153/371 (41%), Gaps = 5/371 (1%)

Query: 376  FGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCT 435
            F   +++   M   G +P+   Y  ++ +Y +  +   A  +  Q +  G   D V+  T
Sbjct: 724  FAEASQIFSDMRFYGVEPSDHLYRSMVVTYCKMGFPETAHYLIDQAEEKGLLFDDVSIHT 783

Query: 436  -LIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQ 494
             +I+ + K      A  +   ++      D   ++ +I+    +G  + A  +F  M+  
Sbjct: 784  GVIEAYGKLKLWQKAESLVGSLRQKCTMVDRKVWNALIHAYAASGCYERARAIFNTMMRD 843

Query: 495  GCIPNLVTYN-IMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDE 553
            G  P + + N +M AL    R       + +++Q+ GF+  K + +++++   H G + E
Sbjct: 844  GPSPTVDSVNGLMQALIVDGR-LDELYVVIQELQDMGFKISKSSITLMLDAFAHAGNIFE 902

Query: 554  AEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLS 613
             + ++  M+   + P   +Y +++ L  K   VR        M  A  +P++   NS+L 
Sbjct: 903  VKKIYQGMKAAGYFPTMHLYRIMIGLLAKGKRVRDVEAMVSEMEVAXFKPDLSIWNSVLK 962

Query: 614  AFLRVGQLSDAYHLLQGMLNLGLKPSLQTY-TLLLSCCTEARSPYDMGFCHELMAVSGHP 672
             +  +G       + Q +   GLKP   TY TL+L  C + R    +   HE+  V   P
Sbjct: 963  LYTGIGDFKKTGQVYQLIQEAGLKPDEDTYNTLILMYCRDRRPEEGLSLMHEMRRVGLEP 1022

Query: 673  AHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRESKRGLVDAVVDFLHKSGLKEEAGSV 732
                  S+ S     Q V +      E + S++ +  R     ++     SG   +A  +
Sbjct: 1023 KLDTYKSLISAFGKLQMV-EQAEELFEGLLSKECKLDRSFYHIMMKMFRNSGNHSKAEKL 1081

Query: 733  WEVAAQKNVYP 743
              V  +  V P
Sbjct: 1082 LGVMKEAGVEP 1092



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 51/223 (22%), Positives = 105/223 (47%), Gaps = 2/223 (0%)

Query: 350  LRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRAN 409
            L ++AG K DE TY T++ +  R R+      L+ +M R G +P + TY  LI ++G+  
Sbjct: 979  LIQEAGLKPDEDTYNTLILMYCRDRRPEEGLSLMHEMRRVGLEPKLDTYKSLISAFGKLQ 1038

Query: 410  YLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYS 469
             + +A ++F+ +    C+ DR  Y  ++ +   +G    A  +   M+ AG+ P   T  
Sbjct: 1039 MVEQAEELFEGLLSKECKLDRSFYHIMMKMFRNSGNHSKAEKLLGVMKEAGVEPTIATMH 1098

Query: 470  VIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNA 529
            +++     +G  + A ++   +  +G   + + Y+ +I    K  ++  A++   +M+  
Sbjct: 1099 LLMVSYSGSGQPEEAEKVLDNLKVEGLPLSTLPYSSVIDAYLKNGDHNVAIQKLMEMKKD 1158

Query: 530  GFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPV 572
            G EPD   ++  +       +  EA  +   +R   +  D P+
Sbjct: 1159 GLEPDHRIWTCFVRAASLSQHTSEAIVLLKALRDTGF--DLPI 1199


>gi|302822703|ref|XP_002993008.1| hypothetical protein SELMODRAFT_136281 [Selaginella moellendorffii]
 gi|300139208|gb|EFJ05954.1| hypothetical protein SELMODRAFT_136281 [Selaginella moellendorffii]
          Length = 431

 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 99/315 (31%), Positives = 156/315 (49%), Gaps = 1/315 (0%)

Query: 332 QVLKQLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGC 391
           Q L +  +  +A+ F + + +  G + D   Y  ++  LG+A       KL   M   GC
Sbjct: 57  QSLVKAGNVVLAMDFLDKMIK-TGLEPDTLLYNVVLDGLGKANMIDEACKLFASMKSMGC 115

Query: 392 QPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMD 451
             +  TY  LI S GR     EA  +F +M+  GC P    Y  +IDI+ KAG ++ AM 
Sbjct: 116 PADDYTYAILIRSLGRCKRDEEATLLFDEMEERGCTPSAPAYTNVIDIYCKAGRIESAMV 175

Query: 452 MYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQA 511
           + KKM    L+PD +T + +I  + + G  + A ++F  M   G   N V++N M+    
Sbjct: 176 VLKKMLDKNLAPDDYTLNSLITAVSRTGRTELACEIFERMKKSGVAVNTVSFNAMLDCCG 235

Query: 512 KARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEP 571
           KA     A +   +M+  G +P+ +T++ ++  LG   Y  EA  V  EMR     PD  
Sbjct: 236 KAGKVGLAYQFMDEMEARGIKPNSITFNTLINCLGRAKYASEAYKVLQEMRSAGLTPDVF 295

Query: 572 VYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGM 631
            Y  +++ + KAGN+ KA+E +  M +AG   NV T N L+ A ++ G+  DA  +   M
Sbjct: 296 TYTCMIEAFAKAGNMGKAFEMFGDMEKAGCSANVVTYNLLIDALVKAGRYQDARDIYFDM 355

Query: 632 LNLGLKPSLQTYTLL 646
              G+ P   T T+L
Sbjct: 356 KKKGILPDAITATVL 370



 Score =  150 bits (378), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 97/360 (26%), Positives = 177/360 (49%), Gaps = 8/360 (2%)

Query: 391 CQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAM 450
           C+ +V+  N +I +YGR++ +++ +D F+++   G +P+  TY  +I    KAG + +AM
Sbjct: 10  CRYHVLVSNAVIAAYGRSSRIHKVMDEFQELDKHGSKPNAYTYKCVIQSLVKAGNVVLAM 69

Query: 451 DMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQ 510
           D   KM   GL PDT  Y+V+++ LGKA  +  A +LF  M + GC  +  TY I+I   
Sbjct: 70  DFLDKMIKTGLEPDTLLYNVVLDGLGKANMIDEACKLFASMKSMGCPADDYTYAILIRSL 129

Query: 511 AKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDE 570
            + +  + A  L+ +M+  G  P    Y+ V+++    G ++ A  V  +M  KN  PD+
Sbjct: 130 GRCKRDEEATLLFDEMEERGCTPSAPAYTNVIDIYCKAGRIESAMVVLKKMLDKNLAPDD 189

Query: 571 PVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQG 630
                L+    + G    A E +E M ++G+  N  + N++L    + G++  AY  +  
Sbjct: 190 YTLNSLITAVSRTGRTELACEIFERMKKSGVAVNTVSFNAMLDCCGKAGKVGLAYQFMDE 249

Query: 631 MLNLGLKPSLQTYTLLLSCCTEARSPYDMGFCHELMAVSGHPAHMFLLS-MPSPGPDGQN 689
           M   G+KP+  T+  L++C   A+   +     + M  +G    +F  + M        N
Sbjct: 250 MEARGIKPNSITFNTLINCLGRAKYASEAYKVLQEMRSAGLTPDVFTYTCMIEAFAKAGN 309

Query: 690 VRDHVGSFLEMMHSEDRESKRGLV---DAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAV 746
               +G   EM    ++      V   + ++D L K+G  ++A  ++    +K + PDA+
Sbjct: 310 ----MGKAFEMFGDMEKAGCSANVVTYNLLIDALVKAGRYQDARDIYFDMKKKGILPDAI 365



 Score =  125 bits (314), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 62/201 (30%), Positives = 113/201 (56%), Gaps = 4/201 (1%)

Query: 359 DEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVF 418
           D++T  +++  + R  +     ++ ++M + G   N V++N ++   G+A  +  A    
Sbjct: 188 DDYTLNSLITAVSRTGRTELACEIFERMKKSGVAVNTVSFNAMLDCCGKAGKVGLAYQFM 247

Query: 419 KQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKA 478
            +M+  G +P+ +T+ TLI+   +A +   A  + ++M++AGL+PD FTY+ +I    KA
Sbjct: 248 DEMEARGIKPNSITFNTLINCLGRAKYASEAYKVLQEMRSAGLTPDVFTYTCMIEAFAKA 307

Query: 479 GHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTY 538
           G++  A ++F +M   GC  N+VTYN++I    KA  YQ A  +Y DM+  G  PD +T 
Sbjct: 308 GNMGKAFEMFGDMEKAGCSANVVTYNLLIDALVKAGRYQDARDIYFDMKKKGILPDAITA 367

Query: 539 SIVMEVLGHCGY----LDEAE 555
           +++ ++ G C      LDE E
Sbjct: 368 TVLQQLAGKCKLSGISLDENE 388



 Score =  124 bits (311), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 70/266 (26%), Positives = 129/266 (48%), Gaps = 35/266 (13%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           +  G   D++TY  ++  LGR ++      L D+M   GC P+   Y  +I  Y +A  +
Sbjct: 111 KSMGCPADDYTYAILIRSLGRCKRDEEATLLFDEMEERGCTPSAPAYTNVIDIYCKAGRI 170

Query: 412 NEAL-----------------------------------DVFKQMQVVGCEPDRVTYCTL 436
             A+                                   ++F++M+  G   + V++  +
Sbjct: 171 ESAMVVLKKMLDKNLAPDDYTLNSLITAVSRTGRTELACEIFERMKKSGVAVNTVSFNAM 230

Query: 437 IDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGC 496
           +D   KAG + +A     +M+A G+ P++ T++ +INCLG+A +   A+++  EM + G 
Sbjct: 231 LDCCGKAGKVGLAYQFMDEMEARGIKPNSITFNTLINCLGRAKYASEAYKVLQEMRSAGL 290

Query: 497 IPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEA 556
            P++ TY  MI   AKA N   A +++ DM+ AG   + VTY+++++ L   G   +A  
Sbjct: 291 TPDVFTYTCMIEAFAKAGNMGKAFEMFGDMEKAGCSANVVTYNLLIDALVKAGRYQDARD 350

Query: 557 VFAEMRRKNWVPDEPVYGLLVDLWGK 582
           ++ +M++K  +PD     +L  L GK
Sbjct: 351 IYFDMKKKGILPDAITATVLQQLAGK 376



 Score =  110 bits (274), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 53/163 (32%), Positives = 94/163 (57%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           +++G   +  ++  M+   G+A + G   + +D+M   G +PN +T+N LI+  GRA Y 
Sbjct: 216 KKSGVAVNTVSFNAMLDCCGKAGKVGLAYQFMDEMEARGIKPNSITFNTLINCLGRAKYA 275

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
           +EA  V ++M+  G  PD  TY  +I+  AKAG +  A +M+  M+ AG S +  TY+++
Sbjct: 276 SEAYKVLQEMRSAGLTPDVFTYTCMIEAFAKAGNMGKAFEMFGDMEKAGCSANVVTYNLL 335

Query: 472 INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKAR 514
           I+ L KAG  Q A  ++ +M  +G +P+ +T  ++  L  K +
Sbjct: 336 IDALVKAGRYQDARDIYFDMKKKGILPDAITATVLQQLAGKCK 378



 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 39/134 (29%), Positives = 61/134 (45%), Gaps = 17/134 (12%)

Query: 318 LGNTNYSMDAYQANQVLKQLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFG 377
           LG   Y+ +AY+   VL+++              R AG   D  TYT M+    +A   G
Sbjct: 269 LGRAKYASEAYK---VLQEM--------------RSAGLTPDVFTYTCMIEAFAKAGNMG 311

Query: 378 AINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLI 437
              ++   M + GC  NVVTYN LI +  +A    +A D++  M+  G  PD +T   L 
Sbjct: 312 KAFEMFGDMEKAGCSANVVTYNLLIDALVKAGRYQDARDIYFDMKKKGILPDAITATVLQ 371

Query: 438 DIHAKAGFLDVAMD 451
            +  K     +++D
Sbjct: 372 QLAGKCKLSGISLD 385


>gi|359473521|ref|XP_002273398.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At2g02150-like [Vitis vinifera]
          Length = 755

 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 119/419 (28%), Positives = 194/419 (46%), Gaps = 59/419 (14%)

Query: 286 PF--SRHFASTGNV-VESVSRILRQWKWGPLAEEALGNTNYSMDAYQANQVLKQL-QDHT 341
           PF  +RHF +      +SV  I+R+ +W      +L ++  ++    A++VL +L QD  
Sbjct: 56  PFVSNRHFHNFDCFDKDSVREIVREQRWDDFRIVSLFDS--ALAPIWASRVLVELCQDAR 113

Query: 342 VALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMV-------------- 387
           +AL FF W + + GF+H    Y  +V IL  AR +   N +L +++              
Sbjct: 114 LALRFFEWAKGRIGFQHTSEAYCILVHILFCARFYSDANAVLKELICLRRVLPSWDVFDL 173

Query: 388 ----RDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKA 443
               R+ C P    ++ L  +      L EA + F +M+     P   +   L+   +K 
Sbjct: 174 LWATRNVCVPGFGVFDALFSALIELGMLEEASECFLKMRKFRVFPKPRSCNALLHRLSKV 233

Query: 444 GFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTY 503
           G  D++   +K M AAG+    FTY+++I+ L K G L+ A  LF +M   G  P++VTY
Sbjct: 234 GRGDLSRKFFKDMGAAGIKRSVFTYNIMIDYLCKEGDLEMARSLFTQMKEAGFTPDIVTY 293

Query: 504 NIMIALQAKARNYQSALKLYRDMQNA---------------------------------- 529
           N +I    K       + ++  M++A                                  
Sbjct: 294 NSLIDGHGKLGLLDECICIFEQMKDADCDPDVITYNALINCFCKFERMPKAFEFLHEMKA 353

Query: 530 -GFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRK 588
            G +P+ VTYS  ++     G L EA   F +MRR    P+E  Y  L+D   KAGN+ +
Sbjct: 354 NGLKPNVVTYSTFIDAFCKEGMLQEAIKFFVDMRRVALTPNEFTYTSLIDANCKAGNLAE 413

Query: 589 AWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
           A +  E +LQAG++ NV T  +LL      G++ +A  + + MLN G+ P+ +TYT L+
Sbjct: 414 ALKLVEEILQAGIKLNVVTYTALLDGLCEEGRMKEAEEVFRAMLNAGVAPNQETYTALV 472



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 100/329 (30%), Positives = 153/329 (46%), Gaps = 35/329 (10%)

Query: 354 AGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNE 413
           AG K    TY  M+  L +         L  QM   G  P++VTYN LI  +G+   L+E
Sbjct: 249 AGIKRSVFTYNIMIDYLCKEGDLEMARSLFTQMKEAGFTPDIVTYNSLIDGHGKLGLLDE 308

Query: 414 ALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIIN 473
            + +F+QM+   C+PD +TY  LI+   K   +  A +   +M+A GL P+  TYS  I+
Sbjct: 309 CICIFEQMKDADCDPDVITYNALINCFCKFERMPKAFEFLHEMKANGLKPNVVTYSTFID 368

Query: 474 CLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEP 533
              K G LQ A + F +M      PN  TY  +I    KA N   ALKL  ++  AG + 
Sbjct: 369 AFCKEGMLQEAIKFFVDMRRVALTPNEFTYTSLIDANCKAGNLAEALKLVEEILQAGIKL 428

Query: 534 DKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWY 593
           + VTY+ +++ L   G + EAE VF  M      P++  Y  LV  + KA  +  A +  
Sbjct: 429 NVVTYTALLDGLCEEGRMKEAEEVFRAMLNAGVAPNQETYTALVHGFIKAKEMEYAKDIL 488

Query: 594 EAMLQAGLRPNV--------PTCN---------------------------SLLSAFLRV 618
           + M +  ++P++          CN                           +L+ A+ + 
Sbjct: 489 KEMKEKCIKPDLLLYGTILWGLCNESRLEEAKLLIGEIKESGINTNAVIYTTLMDAYFKS 548

Query: 619 GQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
           GQ ++A  LL+ ML+LGL  +  TY  L+
Sbjct: 549 GQATEALTLLEEMLDLGLIATEVTYCALI 577



 Score =  149 bits (377), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 111/367 (30%), Positives = 173/367 (47%), Gaps = 8/367 (2%)

Query: 381 KLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIH 440
           K    M   G + +V TYN +I    +   L  A  +F QM+  G  PD VTY +LID H
Sbjct: 241 KFFKDMGAAGIKRSVFTYNIMIDYLCKEGDLEMARSLFTQMKEAGFTPDIVTYNSLIDGH 300

Query: 441 AKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNL 500
            K G LD  + ++++M+ A   PD  TY+ +INC  K   +  A +   EM   G  PN+
Sbjct: 301 GKLGLLDECICIFEQMKDADCDPDVITYNALINCFCKFERMPKAFEFLHEMKANGLKPNV 360

Query: 501 VTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAE 560
           VTY+  I    K    Q A+K + DM+     P++ TY+ +++     G L EA  +  E
Sbjct: 361 VTYSTFIDAFCKEGMLQEAIKFFVDMRRVALTPNEFTYTSLIDANCKAGNLAEALKLVEE 420

Query: 561 MRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQ 620
           + +     +   Y  L+D   + G +++A E + AML AG+ PN  T  +L+  F++  +
Sbjct: 421 ILQAGIKLNVVTYTALLDGLCEEGRMKEAEEVFRAMLNAGVAPNQETYTALVHGFIKAKE 480

Query: 621 LSDAYHLLQGMLNLGLKPSLQTY-TLLLSCCTEARSPYDMGFCHELMAVSGHP-AHMFLL 678
           +  A  +L+ M    +KP L  Y T+L   C E+R         E+     +  A ++  
Sbjct: 481 MEYAKDILKEMKEKCIKPDLLLYGTILWGLCNESRLEEAKLLIGEIKESGINTNAVIYTT 540

Query: 679 SMPSPGPDGQNVRDHVGSFLEMMHSEDRESKRGLVDAVVDFLHKSGLKEEA----GSVWE 734
            M +    GQ       + LE M      +      A++D L KSGL +EA    G + E
Sbjct: 541 LMDAYFKSGQAT--EALTLLEEMLDLGLIATEVTYCALIDGLCKSGLVQEAMHHFGRMSE 598

Query: 735 VAAQKNV 741
           +  Q NV
Sbjct: 599 IGLQPNV 605



 Score =  127 bits (318), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 90/323 (27%), Positives = 152/323 (47%), Gaps = 7/323 (2%)

Query: 325 MDAYQANQVLKQLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLD 384
           +DA+    +L++      A+ FF  +RR A    +E TYT+++    +A       KL++
Sbjct: 367 IDAFCKEGMLQE------AIKFFVDMRRVA-LTPNEFTYTSLIDANCKAGNLAEALKLVE 419

Query: 385 QMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAG 444
           ++++ G + NVVTY  L+        + EA +VF+ M   G  P++ TY  L+    KA 
Sbjct: 420 EILQAGIKLNVVTYTALLDGLCEEGRMKEAEEVFRAMLNAGVAPNQETYTALVHGFIKAK 479

Query: 445 FLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYN 504
            ++ A D+ K+M+   + PD   Y  I+  L     L+ A  L  E+   G   N V Y 
Sbjct: 480 EMEYAKDILKEMKEKCIKPDLLLYGTILWGLCNESRLEEAKLLIGEIKESGINTNAVIYT 539

Query: 505 IMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRK 564
            ++    K+     AL L  +M + G    +VTY  +++ L   G + EA   F  M   
Sbjct: 540 TLMDAYFKSGQATEALTLLEEMLDLGLIATEVTYCALIDGLCKSGLVQEAMHHFGRMSEI 599

Query: 565 NWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDA 624
              P+  VY  LVD   K      A + ++ ML  G+ P+     +L+   ++ G L +A
Sbjct: 600 GLQPNVAVYTALVDGLCKNNCFEVAKKLFDEMLDKGMMPDKIAYTALIDGNMKHGNLQEA 659

Query: 625 YHLLQGMLNLGLKPSLQTYTLLL 647
            +L   M+ +G++  L  YT L+
Sbjct: 660 LNLRDRMIEIGMELDLHAYTALI 682



 Score =  125 bits (315), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 81/324 (25%), Positives = 147/324 (45%), Gaps = 35/324 (10%)

Query: 359 DEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVF 418
           D  TY  ++    +  +     + L +M  +G +PNVVTY+  I ++ +   L EA+  F
Sbjct: 324 DVITYNALINCFCKFERMPKAFEFLHEMKANGLKPNVVTYSTFIDAFCKEGMLQEAIKFF 383

Query: 419 KQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKA 478
             M+ V   P+  TY +LID + KAG L  A+ + +++  AG+  +  TY+ +++ L + 
Sbjct: 384 VDMRRVALTPNEFTYTSLIDANCKAGNLAEALKLVEEILQAGIKLNVVTYTALLDGLCEE 443

Query: 479 GHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTY 538
           G ++ A ++F  M+N G  PN  TY  ++    KA+  + A  + ++M+    +PD + Y
Sbjct: 444 GRMKEAEEVFRAMLNAGVAPNQETYTALVHGFIKAKEMEYAKDILKEMKEKCIKPDLLLY 503

Query: 539 SIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAML- 597
             ++  L +   L+EA+ +  E++      +  +Y  L+D + K+G   +A    E ML 
Sbjct: 504 GTILWGLCNESRLEEAKLLIGEIKESGINTNAVIYTTLMDAYFKSGQATEALTLLEEMLD 563

Query: 598 ----------------------------------QAGLRPNVPTCNSLLSAFLRVGQLSD 623
                                             + GL+PNV    +L+    +      
Sbjct: 564 LGLIATEVTYCALIDGLCKSGLVQEAMHHFGRMSEIGLQPNVAVYTALVDGLCKNNCFEV 623

Query: 624 AYHLLQGMLNLGLKPSLQTYTLLL 647
           A  L   ML+ G+ P    YT L+
Sbjct: 624 AKKLFDEMLDKGMMPDKIAYTALI 647



 Score =  118 bits (295), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 74/250 (29%), Positives = 120/250 (48%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           ++   K D   Y T++  L    +      L+ ++   G   N V Y  L+ +Y ++   
Sbjct: 492 KEKCIKPDLLLYGTILWGLCNESRLEEAKLLIGEIKESGINTNAVIYTTLMDAYFKSGQA 551

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
            EAL + ++M  +G     VTYC LID   K+G +  AM  + +M   GL P+   Y+ +
Sbjct: 552 TEALTLLEEMLDLGLIATEVTYCALIDGLCKSGLVQEAMHHFGRMSEIGLQPNVAVYTAL 611

Query: 472 INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF 531
           ++ L K    + A +LF EM+++G +P+ + Y  +I    K  N Q AL L   M   G 
Sbjct: 612 VDGLCKNNCFEVAKKLFDEMLDKGMMPDKIAYTALIDGNMKHGNLQEALNLRDRMIEIGM 671

Query: 532 EPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWE 591
           E D   Y+ ++  L H G + +A  +  EM  K  +PDE VY  L+  +   G V +A E
Sbjct: 672 ELDLHAYTALIWGLSHSGQVQKARNLLDEMIGKGVLPDEVVYMCLIKKYYALGKVDEALE 731

Query: 592 WYEAMLQAGL 601
               M + G+
Sbjct: 732 LQNEMAKRGM 741



 Score =  114 bits (285), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 76/295 (25%), Positives = 142/295 (48%)

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
           QAG K +  TYT ++  L    +     ++   M+  G  PN  TY  L+H + +A  + 
Sbjct: 423 QAGIKLNVVTYTALLDGLCEEGRMKEAEEVFRAMLNAGVAPNQETYTALVHGFIKAKEME 482

Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
            A D+ K+M+    +PD + Y T++        L+ A  +  +++ +G++ +   Y+ ++
Sbjct: 483 YAKDILKEMKEKCIKPDLLLYGTILWGLCNESRLEEAKLLIGEIKESGINTNAVIYTTLM 542

Query: 473 NCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFE 532
           +   K+G    A  L  EM++ G I   VTY  +I    K+   Q A+  +  M   G +
Sbjct: 543 DAYFKSGQATEALTLLEEMLDLGLIATEVTYCALIDGLCKSGLVQEAMHHFGRMSEIGLQ 602

Query: 533 PDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEW 592
           P+   Y+ +++ L      + A+ +F EM  K  +PD+  Y  L+D   K GN+++A   
Sbjct: 603 PNVAVYTALVDGLCKNNCFEVAKKLFDEMLDKGMMPDKIAYTALIDGNMKHGNLQEALNL 662

Query: 593 YEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
            + M++ G+  ++    +L+      GQ+  A +LL  M+  G+ P    Y  L+
Sbjct: 663 RDRMIEIGMELDLHAYTALIWGLSHSGQVQKARNLLDEMIGKGVLPDEVVYMCLI 717



 Score = 84.7 bits (208), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 58/216 (26%), Positives = 102/216 (47%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           +++G   +   YTT++    ++ Q      LL++M+  G     VTY  LI    ++  +
Sbjct: 527 KESGINTNAVIYTTLMDAYFKSGQATEALTLLEEMLDLGLIATEVTYCALIDGLCKSGLV 586

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
            EA+  F +M  +G +P+   Y  L+D   K    +VA  ++ +M   G+ PD   Y+ +
Sbjct: 587 QEAMHHFGRMSEIGLQPNVAVYTALVDGLCKNNCFEVAKKLFDEMLDKGMMPDKIAYTAL 646

Query: 472 INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF 531
           I+   K G+LQ A  L   M+  G   +L  Y  +I   + +   Q A  L  +M   G 
Sbjct: 647 IDGNMKHGNLQEALNLRDRMIEIGMELDLHAYTALIWGLSHSGQVQKARNLLDEMIGKGV 706

Query: 532 EPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWV 567
            PD+V Y  +++     G +DEA  +  EM ++  +
Sbjct: 707 LPDEVVYMCLIKKYYALGKVDEALELQNEMAKRGMI 742



 Score = 60.1 bits (144), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 42/148 (28%), Positives = 67/148 (45%)

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
           + G + +   YT +V  L +   F    KL D+M+  G  P+ + Y  LI    +   L 
Sbjct: 598 EIGLQPNVAVYTALVDGLCKNNCFEVAKKLFDEMLDKGMMPDKIAYTALIDGNMKHGNLQ 657

Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
           EAL++  +M  +G E D   Y  LI   + +G +  A ++  +M   G+ PD   Y  +I
Sbjct: 658 EALNLRDRMIEIGMELDLHAYTALIWGLSHSGQVQKARNLLDEMIGKGVLPDEVVYMCLI 717

Query: 473 NCLGKAGHLQAAHQLFCEMVNQGCIPNL 500
                 G +  A +L  EM  +G I  L
Sbjct: 718 KKYYALGKVDEALELQNEMAKRGMITGL 745


>gi|302768589|ref|XP_002967714.1| hypothetical protein SELMODRAFT_63558 [Selaginella moellendorffii]
 gi|300164452|gb|EFJ31061.1| hypothetical protein SELMODRAFT_63558 [Selaginella moellendorffii]
          Length = 384

 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 92/260 (35%), Positives = 142/260 (54%)

Query: 362 TYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQM 421
           TY  ++   GR   F    +L D+M   GC  +V TYN  I  YG+   L +   +  +M
Sbjct: 125 TYNALIQGYGRKGLFKEALELYDEMDGVGCAKDVHTYNIAIAMYGKRGLLEDMERLLDEM 184

Query: 422 QVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHL 481
              G  PD+VTY TL+D++AK  +   A ++ ++M  AG  P+ +TY+++++   K   +
Sbjct: 185 DTKGVPPDQVTYNTLLDVYAKKSYFVKAHEILREMTEAGYRPNIWTYNIMLSSARKEQSV 244

Query: 482 QAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIV 541
             A QLF  + ++G +PN+VTY+ M++L  +   Y  A KL+ +M  AG  P  + YS +
Sbjct: 245 AEATQLFENLKSKGVVPNIVTYSAMLSLYGRHGLYTEAAKLWDEMIEAGCIPCIIAYSGL 304

Query: 542 MEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGL 601
           +E  GH G   EA A F +MR+   VPD  +Y  L+D +GKAG  R+A   Y  M + G 
Sbjct: 305 IESYGHHGMYQEALACFQDMRKSGIVPDTKIYTALMDAYGKAGRCREAELLYFEMTKEGF 364

Query: 602 RPNVPTCNSLLSAFLRVGQL 621
            P+  T   L+ AF   G+L
Sbjct: 365 VPDGITYGILVRAFANAGRL 384



 Score =  154 bits (390), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 98/338 (28%), Positives = 163/338 (48%), Gaps = 16/338 (4%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           +++G K DE  Y  +V  L  + +  A  K+LD M RD    N+VTY  LI  Y     L
Sbjct: 45  KESGKKPDEILYNCLVNGLVNSGRLEAAEKILDDMKRDKVSANLVTYTNLIKEYANTGRL 104

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
            +   +F++M+  G  P+  TY  LI  + + G    A+++Y +M   G + D  TY++ 
Sbjct: 105 QDCRKLFQEMKDKGESPNSWTYNALIQGYGRKGLFKEALELYDEMDGVGCAKDVHTYNIA 164

Query: 472 INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF 531
           I   GK G L+   +L  EM  +G  P+ VTYN ++ + AK   +  A ++ R+M  AG+
Sbjct: 165 IAMYGKRGLLEDMERLLDEMDTKGVPPDQVTYNTLLDVYAKKSYFVKAHEILREMTEAGY 224

Query: 532 EPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWE 591
            P+  TY+I++        + EA  +F  ++ K  VP+   Y  ++ L+G+ G   +A +
Sbjct: 225 RPNIWTYNIMLSSARKEQSVAEATQLFENLKSKGVVPNIVTYSAMLSLYGRHGLYTEAAK 284

Query: 592 WYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCT 651
            ++ M++AG  P +   + L+ ++   G   +A    Q M   G+ P  + YT L+    
Sbjct: 285 LWDEMIEAGCIPCIIAYSGLIESYGHHGMYQEALACFQDMRKSGIVPDTKIYTALMDAYG 344

Query: 652 EARSPYDMGFCHELMAVSGHPAHMFLLSMPSPG--PDG 687
           +A      G C E        A +    M   G  PDG
Sbjct: 345 KA------GRCRE--------AELLYFEMTKEGFVPDG 368



 Score =  147 bits (372), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 88/268 (32%), Positives = 145/268 (54%), Gaps = 1/268 (0%)

Query: 382 LLDQMVRDGCQPNVVTYNRLIHSYGR-ANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIH 440
           L  +M++DGC+  VVTY  +IH Y R  + L+ AL + + M+  G +PD + Y  L++  
Sbjct: 4   LFYRMMKDGCEATVVTYTVIIHGYLRQKSKLDHALRLLEVMKESGKKPDEILYNCLVNGL 63

Query: 441 AKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNL 500
             +G L+ A  +   M+   +S +  TY+ +I      G LQ   +LF EM ++G  PN 
Sbjct: 64  VNSGRLEAAEKILDDMKRDKVSANLVTYTNLIKEYANTGRLQDCRKLFQEMKDKGESPNS 123

Query: 501 VTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAE 560
            TYN +I    +   ++ AL+LY +M   G   D  TY+I + + G  G L++ E +  E
Sbjct: 124 WTYNALIQGYGRKGLFKEALELYDEMDGVGCAKDVHTYNIAIAMYGKRGLLEDMERLLDE 183

Query: 561 MRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQ 620
           M  K   PD+  Y  L+D++ K     KA E    M +AG RPN+ T N +LS+  +   
Sbjct: 184 MDTKGVPPDQVTYNTLLDVYAKKSYFVKAHEILREMTEAGYRPNIWTYNIMLSSARKEQS 243

Query: 621 LSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
           +++A  L + + + G+ P++ TY+ +LS
Sbjct: 244 VAEATQLFENLKSKGVVPNIVTYSAMLS 271



 Score =  109 bits (273), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 68/243 (27%), Positives = 120/243 (49%), Gaps = 1/243 (0%)

Query: 414 ALDVFKQMQVVGCEPDRVTYCTLIDIHAK-AGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
           A  +F +M   GCE   VTY  +I  + +    LD A+ + + M+ +G  PD   Y+ ++
Sbjct: 1   ACSLFYRMMKDGCEATVVTYTVIIHGYLRQKSKLDHALRLLEVMKESGKKPDEILYNCLV 60

Query: 473 NCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFE 532
           N L  +G L+AA ++  +M       NLVTY  +I   A     Q   KL+++M++ G  
Sbjct: 61  NGLVNSGRLEAAEKILDDMKRDKVSANLVTYTNLIKEYANTGRLQDCRKLFQEMKDKGES 120

Query: 533 PDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEW 592
           P+  TY+ +++  G  G   EA  ++ EM       D   Y + + ++GK G +      
Sbjct: 121 PNSWTYNALIQGYGRKGLFKEALELYDEMDGVGCAKDVHTYNIAIAMYGKRGLLEDMERL 180

Query: 593 YEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTE 652
            + M   G+ P+  T N+LL  + +      A+ +L+ M   G +P++ TY ++LS   +
Sbjct: 181 LDEMDTKGVPPDQVTYNTLLDVYAKKSYFVKAHEILREMTEAGYRPNIWTYNIMLSSARK 240

Query: 653 ARS 655
            +S
Sbjct: 241 EQS 243


>gi|380875521|gb|AFF27500.1| PPR domain-containing protein [Oryza sativa Indica Group]
          Length = 742

 Score =  164 bits (414), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 98/302 (32%), Positives = 157/302 (51%), Gaps = 1/302 (0%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           GF+ D+ TY T V  L +    G   K++D MV++G  P+V TYN +++   +   L EA
Sbjct: 281 GFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEA 340

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
             +  QM   GC PD  T+ TLI        L+ A+D+ +++   G+SPD +T++++IN 
Sbjct: 341 KGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINA 400

Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPD 534
           L K G    A +LF EM N GC P+ VTYN +I           AL L +DM++ G    
Sbjct: 401 LCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRS 460

Query: 535 KVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYE 594
            +TY+ +++ L     ++EAE VF +M  +    +   +  L+D   K   +  A+    
Sbjct: 461 TITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFGLIN 520

Query: 595 AMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTY-TLLLSCCTEA 653
            M+  GL+PN  T NS+L+ + + G +  A  +L+ M   G +  + TY TL+   C   
Sbjct: 521 QMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAG 580

Query: 654 RS 655
           R+
Sbjct: 581 RT 582



 Score =  146 bits (368), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 90/320 (28%), Positives = 158/320 (49%)

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
           Q G   D  TY  +V  L +  Q      +L+QMV  GC P++ T+N LI +    N L 
Sbjct: 314 QEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLE 373

Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
           EALD+ +Q+ V G  PD  T+  LI+   K G   +A+ ++++M+ +G +PD  TY+ +I
Sbjct: 374 EALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLI 433

Query: 473 NCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFE 532
           + L   G L  A  L  +M + GC  + +TYN +I    K    + A +++  M   G  
Sbjct: 434 DNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGIS 493

Query: 533 PDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEW 592
            + +T++ +++ L     +D+A  +  +M  +   P+   Y  ++  + K G+++KA + 
Sbjct: 494 RNAITFNTLIDGLCKDKKIDDAFGLINQMISEGLQPNNITYNSILTHYCKQGDIKKAADI 553

Query: 593 YEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTE 652
            E M   G   +V T  +L++   + G+   A  +L+GM   G++P+ + Y  +L     
Sbjct: 554 LETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFR 613

Query: 653 ARSPYDMGFCHELMAVSGHP 672
             +  D       MA  G P
Sbjct: 614 RNNIRDALSLFREMAEVGEP 633



 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 92/329 (27%), Positives = 153/329 (46%), Gaps = 35/329 (10%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           G   DE T+TT++          A  ++  +M+  GC    VT N LI+ Y +   + +A
Sbjct: 211 GVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDA 270

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
           L   +Q    G EPD++TY T ++   +   +  A+ +   M   G  PD FTY++++NC
Sbjct: 271 LGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNC 330

Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPD 534
           L K G L+ A  +  +MV++GC+P++ T+N +IA        + AL L R +   G  PD
Sbjct: 331 LCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPD 390

Query: 535 KVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVD---LWGKAGN------ 585
             T++I++  L   G    A  +F EM+     PDE  Y  L+D     GK G       
Sbjct: 391 VYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLK 450

Query: 586 --------------------------VRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVG 619
                                     + +A E ++ M   G+  N  T N+L+    +  
Sbjct: 451 DMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDK 510

Query: 620 QLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
           ++ DA+ L+  M++ GL+P+  TY  +L+
Sbjct: 511 KIDDAFGLINQMISEGLQPNNITYNSILT 539



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 91/335 (27%), Positives = 160/335 (47%), Gaps = 6/335 (1%)

Query: 318 LGNTNYSMDAYQANQVLKQLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFG 377
           LG  +  +D+Y+     +QL D  V L   N L+   G + D   Y  ++ +L    +  
Sbjct: 109 LGVVHSFLDSYEG----QQLFDDAVDL-ILNQLQPLFGIQADTVVYNHLLNVLVEGSKMK 163

Query: 378 AINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLI 437
            +  +  +M   G +P+VVT+N L+ +  RA+ +  A+ + ++M   G  PD  T+ TL+
Sbjct: 164 LLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTAVLMLEEMSSRGVAPDETTFTTLM 223

Query: 438 DIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCI 497
               + G ++ A+ +  +M   G S    T +V+IN   K G ++ A     + +  G  
Sbjct: 224 QGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFE 283

Query: 498 PNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAV 557
           P+ +TYN  +    +  +   ALK+   M   G +PD  TY+IV+  L   G L+EA+ +
Sbjct: 284 PDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGI 343

Query: 558 FAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLR 617
             +M  +  +PD   +  L+        + +A +    +   G+ P+V T N L++A  +
Sbjct: 344 LNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCK 403

Query: 618 VGQLSDAYHLLQGMLNLGLKPSLQTY-TLLLSCCT 651
           VG    A  L + M N G  P   TY TL+ + C+
Sbjct: 404 VGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCS 438



 Score =  126 bits (316), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 79/293 (26%), Positives = 136/293 (46%), Gaps = 1/293 (0%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           G   D +T+  ++  L +        +L ++M   GC P+ VTYN LI +      L +A
Sbjct: 386 GVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKA 445

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
           LD+ K M+  GC    +TY T+ID   K   ++ A +++ +M   G+S +  T++ +I+ 
Sbjct: 446 LDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDG 505

Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPD 534
           L K   +  A  L  +M+++G  PN +TYN ++    K  + + A  +   M   GFE D
Sbjct: 506 LCKDKKIDDAFGLINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVD 565

Query: 535 KVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYE 594
            VTY  ++  L   G    A  V   MR K   P    Y  ++    +  N+R A   + 
Sbjct: 566 VVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFR 625

Query: 595 AMLQAGLRPNVPTCNSLLSAFLR-VGQLSDAYHLLQGMLNLGLKPSLQTYTLL 646
            M + G  P+  T   +     R  G + +A+  +  M++ G  P   ++ +L
Sbjct: 626 EMAEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFMLEMVDKGFIPEFSSFRML 678



 Score =  116 bits (291), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 92/330 (27%), Positives = 146/330 (44%), Gaps = 15/330 (4%)

Query: 294 TGNVVESVSRILRQWKWGPLAEEALGNTNYSMDAYQANQVLKQL---QDHTVALGFFNWL 350
           TGN +E    + RQ                S D Y  N ++  L    D  +AL  F  +
Sbjct: 368 TGNRLEEALDLARQVTV----------KGVSPDVYTFNILINALCKVGDPHLALRLFEEM 417

Query: 351 RRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANY 410
           +  +G   DE TY T++  L    + G    LL  M   GC  + +TYN +I    +   
Sbjct: 418 K-NSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMR 476

Query: 411 LNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSV 470
           + EA +VF QM + G   + +T+ TLID   K   +D A  +  +M + GL P+  TY+ 
Sbjct: 477 IEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFGLINQMISEGLQPNNITYNS 536

Query: 471 IINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAG 530
           I+    K G ++ A  +   M   G   ++VTY  +I    KA   Q ALK+ R M+  G
Sbjct: 537 ILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKG 596

Query: 531 FEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLV-DLWGKAGNVRKA 589
             P    Y+ V++ L     + +A ++F EM      PD   Y ++   L    G +++A
Sbjct: 597 MRPTPKAYNPVLQSLFRRNNIRDALSLFREMAEVGEPPDALTYKIVFRGLCRGGGPIKEA 656

Query: 590 WEWYEAMLQAGLRPNVPTCNSLLSAFLRVG 619
           +++   M+  G  P   +   L    L +G
Sbjct: 657 FDFMLEMVDKGFIPEFSSFRMLAEGLLNLG 686



 Score =  112 bits (281), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 100/420 (23%), Positives = 187/420 (44%), Gaps = 21/420 (5%)

Query: 378 AINKLLDQMV-RDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTL 436
           A++ +L+Q+    G Q + V YN L++     + +     V+ +M   G +PD VT+ TL
Sbjct: 128 AVDLILNQLQPLFGIQADTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTL 187

Query: 437 IDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGC 496
           +    +A  +  A+ M ++M + G++PD  T++ ++    + G ++AA ++   M+  GC
Sbjct: 188 MKALCRAHQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGC 247

Query: 497 IPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEA 556
               VT N++I    K    + AL   +     GFEPD++TY+  +  L    ++  A  
Sbjct: 248 SATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALK 307

Query: 557 VFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFL 616
           V   M ++   PD   Y ++V+   K G + +A      M+  G  P++ T N+L++A  
Sbjct: 308 VMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALC 367

Query: 617 RVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGFCHELMAVSGHPA--- 673
              +L +A  L + +   G+ P + T+ +L++   +   P+      E M  SG      
Sbjct: 368 TGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEV 427

Query: 674 --HMFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRESKRGLVDAVVDFLHKSGLKEEAGS 731
             +  + ++ S G  G+ +       L+ M S          + ++D L K    EEA  
Sbjct: 428 TYNTLIDNLCSLGKLGKAL-----DLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEE 482

Query: 732 VWEVAAQKNVYPDAVKEKGMSYWLINLHVMSDGTAVIALSRTLAWFRKQMLISGVGPSRI 791
           V+          D +  +G+S   I  + + DG               QM+  G+ P+ I
Sbjct: 483 VF----------DQMDLQGISRNAITFNTLIDGLCKDKKIDDAFGLINQMISEGLQPNNI 532



 Score =  107 bits (267), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 78/326 (23%), Positives = 156/326 (47%), Gaps = 7/326 (2%)

Query: 334 LKQLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQP 393
           L++  D   AL   N    +  F      Y  ++  LG       +  L+ +M R+G Q 
Sbjct: 48  LREQPDPDAALRMLNAALARDDFAPGPEVYEEIIRKLGAVGALDLMKVLVAEMRREGHQV 107

Query: 394 NVVTYNRLIHSYGRANYLNEALD-VFKQMQ-VVGCEPDRVTYCTLIDIHAKAGFLDVAMD 451
            +   +  + SY      ++A+D +  Q+Q + G + D V Y  L+++  +   + +   
Sbjct: 108 KLGVVHSFLDSYEGQQLFDDAVDLILNQLQPLFGIQADTVVYNHLLNVLVEGSKMKLLES 167

Query: 452 MYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQA 511
           +Y +M A G+ PD  T++ ++  L +A  ++ A  +  EM ++G  P+  T+  ++    
Sbjct: 168 VYSEMGARGIKPDVVTFNTLMKALCRAHQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFV 227

Query: 512 KARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHC--GYLDEAEAVFAEMRRKNWVPD 569
           +  + ++AL++   M   G    KVT ++++   G+C  G +++A     +     + PD
Sbjct: 228 EEGSIEAALRVKARMLEMGCSATKVTVNVLIN--GYCKLGRVEDALGYIQQEIADGFEPD 285

Query: 570 EPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQ 629
           +  Y   V+   +  +V  A +  + M+Q G  P+V T N +++   + GQL +A  +L 
Sbjct: 286 QITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILN 345

Query: 630 GMLNLGLKPSLQTY-TLLLSCCTEAR 654
            M++ G  P + T+ TL+ + CT  R
Sbjct: 346 QMVDRGCLPDITTFNTLIAALCTGNR 371



 Score = 69.7 bits (169), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 74/305 (24%), Positives = 122/305 (40%), Gaps = 15/305 (4%)

Query: 451 DMYKKMQAAGLSPDTF-----TYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNI 505
           D   +M  A L+ D F      Y  II  LG  G L     L  EM  +G    L   + 
Sbjct: 55  DAALRMLNAALARDDFAPGPEVYEEIIRKLGAVGALDLMKVLVAEMRREGHQVKLGVVHS 114

Query: 506 MIALQAKARNYQSALKLYRDMQNA--GFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRR 563
            +      + +  A+ L  +      G + D V Y+ ++ VL     +   E+V++EM  
Sbjct: 115 FLDSYEGQQLFDDAVDLILNQLQPLFGIQADTVVYNHLLNVLVEGSKMKLLESVYSEMGA 174

Query: 564 KNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSD 623
           +   PD   +  L+    +A  VR A    E M   G+ P+  T  +L+  F+  G +  
Sbjct: 175 RGIKPDVVTFNTLMKALCRAHQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEA 234

Query: 624 AYHLLQGMLNLGLKPSLQTYTLLLS-CCTEARSPYDMGFCHELMAVSGHPAHMFLLSMPS 682
           A  +   ML +G   +  T  +L++  C   R    +G+  + +A    P  +   +   
Sbjct: 235 ALRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFV- 293

Query: 683 PGPDGQNVRDHVGSFLEMMH---SEDRESKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQK 739
              +G    DHVG  L++M     E  +      + VV+ L K+G  EEA  +      +
Sbjct: 294 ---NGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDR 350

Query: 740 NVYPD 744
              PD
Sbjct: 351 GCLPD 355


>gi|226531255|ref|NP_001140623.1| uncharacterized protein LOC100272697 [Zea mays]
 gi|194700216|gb|ACF84192.1| unknown [Zea mays]
          Length = 96

 Score =  164 bits (414), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 72/96 (75%), Positives = 83/96 (86%)

Query: 761 MSDGTAVIALSRTLAWFRKQMLISGVGPSRIDIVTGWGRRSRVTGTSLVRQAVQELLHMF 820
           MS+GTAV ALSRTLAWF +Q+L  G GP RIDIVTGWGRRSRVTG+SLVRQ++Q+LL++F
Sbjct: 1   MSEGTAVTALSRTLAWFHRQVLTLGTGPERIDIVTGWGRRSRVTGSSLVRQSIQKLLNLF 60

Query: 821 SFPFFTENGNSGCFVGCGEPLNKWLLQSYVDRMHLL 856
             PFFT  GN+GCFVGCGEPLNKWL   YV+RMHLL
Sbjct: 61  ESPFFTTRGNTGCFVGCGEPLNKWLHNPYVERMHLL 96


>gi|38567720|emb|CAE76009.1| B1358B12.18 [Oryza sativa Japonica Group]
 gi|90265197|emb|CAH67636.1| B0812A04.6 [Oryza sativa Indica Group]
          Length = 609

 Score =  164 bits (414), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 93/314 (29%), Positives = 161/314 (51%), Gaps = 1/314 (0%)

Query: 334 LKQLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQP 393
           L +L +   A   F+ ++ + G +    ++ TM+  + RA        L  +M   G  P
Sbjct: 250 LVRLGELASAQNVFDEMQSR-GVRRTVVSFNTMISGMCRAGDLDGAETLHRRMSEAGVTP 308

Query: 394 NVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMY 453
           +V TY  LI    R   + +A  VF++M   G +P+ V +  LID H K G  +  ++++
Sbjct: 309 DVYTYGALIQGLCRVGRIEDARGVFEKMCGRGMKPNAVVFTILIDAHCKKGDAETMLELH 368

Query: 454 KKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKA 513
           ++M+  G+ PD  TY+ I+N L +A  L++A  +  EM + G  P+ VTY  +I    K 
Sbjct: 369 REMRERGVRPDAVTYNAIVNGLCRARDLKSASGIVVEMRSAGLRPDTVTYTTLIDGYCKE 428

Query: 514 RNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVY 573
                A+++ ++M   G   D+VTY+ ++  L   G   +AE V  EM      PD   Y
Sbjct: 429 EELDMAMEIKQNMVAEGVGLDEVTYTALISGLSKAGRSADAERVLGEMMEAGLEPDNTTY 488

Query: 574 GLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLN 633
            +++D + + G+V+      + M   G +P V T N +++ F ++GQ+ +A  LL  M+N
Sbjct: 489 TMVIDAFCRKGDVKTGLRLLKEMQNKGRKPGVVTYNVIMNGFCKLGQMKNADMLLNAMIN 548

Query: 634 LGLKPSLQTYTLLL 647
           +G+ P   TY +LL
Sbjct: 549 IGVSPDDITYNILL 562



 Score =  143 bits (360), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 81/263 (30%), Positives = 136/263 (51%)

Query: 385 QMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAG 444
           Q++  G  P    +N L+    R   L  A +VF +MQ  G     V++ T+I    +AG
Sbjct: 230 QLLDAGLPPEAKLFNVLMRDLVRLGELASAQNVFDEMQSRGVRRTVVSFNTMISGMCRAG 289

Query: 445 FLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYN 504
            LD A  ++++M  AG++PD +TY  +I  L + G ++ A  +F +M  +G  PN V + 
Sbjct: 290 DLDGAETLHRRMSEAGVTPDVYTYGALIQGLCRVGRIEDARGVFEKMCGRGMKPNAVVFT 349

Query: 505 IMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRK 564
           I+I    K  + ++ L+L+R+M+  G  PD VTY+ ++  L     L  A  +  EMR  
Sbjct: 350 ILIDAHCKKGDAETMLELHREMRERGVRPDAVTYNAIVNGLCRARDLKSASGIVVEMRSA 409

Query: 565 NWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDA 624
              PD   Y  L+D + K   +  A E  + M+  G+  +  T  +L+S   + G+ +DA
Sbjct: 410 GLRPDTVTYTTLIDGYCKEEELDMAMEIKQNMVAEGVGLDEVTYTALISGLSKAGRSADA 469

Query: 625 YHLLQGMLNLGLKPSLQTYTLLL 647
             +L  M+  GL+P   TYT+++
Sbjct: 470 ERVLGEMMEAGLEPDNTTYTMVI 492



 Score =  127 bits (318), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 79/272 (29%), Positives = 135/272 (49%), Gaps = 4/272 (1%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           G K +   +T ++    +      + +L  +M   G +P+ VTYN +++   RA  L  A
Sbjct: 340 GMKPNAVVFTILIDAHCKKGDAETMLELHREMRERGVRPDAVTYNAIVNGLCRARDLKSA 399

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
             +  +M+  G  PD VTY TLID + K   LD+AM++ + M A G+  D  TY+ +I+ 
Sbjct: 400 SGIVVEMRSAGLRPDTVTYTTLIDGYCKEEELDMAMEIKQNMVAEGVGLDEVTYTALISG 459

Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPD 534
           L KAG    A ++  EM+  G  P+  TY ++I    +  + ++ L+L ++MQN G +P 
Sbjct: 460 LSKAGRSADAERVLGEMMEAGLEPDNTTYTMVIDAFCRKGDVKTGLRLLKEMQNKGRKPG 519

Query: 535 KVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYE 594
            VTY+++M      G +  A+ +   M      PD+  Y +L+D   K G V    E   
Sbjct: 520 VVTYNVIMNGFCKLGQMKNADMLLNAMINIGVSPDDITYNILLDGHCKHGKVTDIEELKS 579

Query: 595 AMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYH 626
           A    G  P++    S++   ++  + +  YH
Sbjct: 580 A---KGTVPDLGVYTSIVGEIVK-KKTTKTYH 607



 Score =  118 bits (296), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 76/228 (33%), Positives = 120/228 (52%), Gaps = 7/228 (3%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           R+ G + D  TY  +V  L RAR   + + ++ +M   G +P+ VTY  LI  Y +   L
Sbjct: 372 RERGVRPDAVTYNAIVNGLCRARDLKSASGIVVEMRSAGLRPDTVTYTTLIDGYCKEEEL 431

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
           + A+++ + M   G   D VTY  LI   +KAG    A  +  +M  AGL PD  TY+++
Sbjct: 432 DMAMEIKQNMVAEGVGLDEVTYTALISGLSKAGRSADAERVLGEMMEAGLEPDNTTYTMV 491

Query: 472 INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF 531
           I+   + G ++   +L  EM N+G  P +VTYN+++    K    ++A  L   M N G 
Sbjct: 492 IDAFCRKGDVKTGLRLLKEMQNKGRKPGVVTYNVIMNGFCKLGQMKNADMLLNAMINIGV 551

Query: 532 EPDKVTYSIVMEVLGHC--GYLDEAEAVFAEMRRKNWVPDEPVYGLLV 577
            PD +TY+I+++  GHC  G + + E + +    K  VPD  VY  +V
Sbjct: 552 SPDDITYNILLD--GHCKHGKVTDIEELKSA---KGTVPDLGVYTSIV 594



 Score =  108 bits (270), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 62/212 (29%), Positives = 108/212 (50%), Gaps = 11/212 (5%)

Query: 453 YKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAK 512
           Y ++  AGL P+   ++V++  L + G L +A  +F EM ++G    +V++N MI+   +
Sbjct: 228 YLQLLDAGLPPEAKLFNVLMRDLVRLGELASAQNVFDEMQSRGVRRTVVSFNTMISGMCR 287

Query: 513 ARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPV 572
           A +   A  L+R M  AG  PD  TY  +++ L   G +++A  VF +M  +   P+  V
Sbjct: 288 AGDLDGAETLHRRMSEAGVTPDVYTYGALIQGLCRVGRIEDARGVFEKMCGRGMKPNAVV 347

Query: 573 YGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGML 632
           + +L+D   K G+     E +  M + G+RP+  T N++++   R   L  A  ++  M 
Sbjct: 348 FTILIDAHCKKGDAETMLELHREMRERGVRPDAVTYNAIVNGLCRARDLKSASGIVVEMR 407

Query: 633 NLGLKPSLQTYTLLLSCCTEARSPYDMGFCHE 664
           + GL+P   TYT L+            G+C E
Sbjct: 408 SAGLRPDTVTYTTLID-----------GYCKE 428


>gi|224123318|ref|XP_002319049.1| predicted protein [Populus trichocarpa]
 gi|222857425|gb|EEE94972.1| predicted protein [Populus trichocarpa]
          Length = 585

 Score =  164 bits (414), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 110/381 (28%), Positives = 182/381 (47%), Gaps = 10/381 (2%)

Query: 271 FSKPSREMKIPAGLAPFSRHFASTGNVVESVSRILRQWKWGPLAEEALGNTNYSMDAYQA 330
           FS   +  K+  GL P    F +  N + S ++I+   K      + +G   ++      
Sbjct: 126 FSALGKMFKL--GLQPTHVTFGTLLNGLCSKAKIIDAVKLF----DEIGKMGFAPSLITY 179

Query: 331 NQVLKQLQD--HTV-ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMV 387
             ++K L    HT  AL     +  + G K D   Y T++  L + R+         +MV
Sbjct: 180 TTIIKGLCKIGHTTNALQLLKKMEEK-GCKPDVVAYNTVIDSLCKDRRANEAMYFFSEMV 238

Query: 388 RDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLD 447
             G  PNVVTY+ ++H +     LNEA  +FKQM      P+ VT+  L+D   K G + 
Sbjct: 239 DQGIPPNVVTYSSILHGFCNLGQLNEATSLFKQMIGRNVMPNTVTFTILVDGLCKEGMIL 298

Query: 448 VAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMI 507
            A  +++ M   G+ PD +TYS +++       +  A +LF  MV +G  P++  YNI+I
Sbjct: 299 EARRVFEMMTENGVEPDAYTYSALMDGYCLQSQMDEAQKLFDIMVGKGFAPSVRVYNILI 358

Query: 508 ALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWV 567
               K+R    A  L  +M +    PD VTYS +M+     G    A+ +F EM     +
Sbjct: 359 NGHCKSRRLNEAKTLLSEMYDRDLTPDTVTYSTLMQGFCQAGRPQVAQKLFKEMCSYGLL 418

Query: 568 PDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHL 627
           PD   Y +L+D   K G++ +A+   +AM ++ + P++   N L+      G+L  A  L
Sbjct: 419 PDSITYSILLDGLCKHGHLDEAFRLLKAMQESKIEPHICIYNILIQGMCNFGKLEAAREL 478

Query: 628 LQGMLNLGLKPSLQTYTLLLS 648
              +   G++PS+ TYT+++S
Sbjct: 479 FSNLFVKGIQPSVVTYTVMIS 499



 Score =  146 bits (368), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 84/289 (29%), Positives = 153/289 (52%), Gaps = 4/289 (1%)

Query: 363 YTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRAN--YLNEALDVFKQ 420
           +  ++G L + + +  +  L  QM     +PNV T   LI+    +N  +++ A     +
Sbjct: 72  FNKLLGSLVKKKHYSTVISLCKQMDLSNIRPNVYTLTILINCLCHSNRDHVHFAFSALGK 131

Query: 421 MQVVGCEPDRVTYCTLID-IHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAG 479
           M  +G +P  VT+ TL++ + +KA  +D A+ ++ ++   G +P   TY+ II  L K G
Sbjct: 132 MFKLGLQPTHVTFGTLLNGLCSKAKIID-AVKLFDEIGKMGFAPSLITYTTIIKGLCKIG 190

Query: 480 HLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYS 539
           H   A QL  +M  +GC P++V YN +I    K R    A+  + +M + G  P+ VTYS
Sbjct: 191 HTTNALQLLKKMEEKGCKPDVVAYNTVIDSLCKDRRANEAMYFFSEMVDQGIPPNVVTYS 250

Query: 540 IVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQA 599
            ++    + G L+EA ++F +M  +N +P+   + +LVD   K G + +A   +E M + 
Sbjct: 251 SILHGFCNLGQLNEATSLFKQMIGRNVMPNTVTFTILVDGLCKEGMILEARRVFEMMTEN 310

Query: 600 GLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
           G+ P+  T ++L+  +    Q+ +A  L   M+  G  PS++ Y +L++
Sbjct: 311 GVEPDAYTYSALMDGYCLQSQMDEAQKLFDIMVGKGFAPSVRVYNILIN 359



 Score =  135 bits (339), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 83/286 (29%), Positives = 142/286 (49%)

Query: 362 TYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQM 421
           T+T +V  L +        ++ + M  +G +P+  TY+ L+  Y   + ++EA  +F  M
Sbjct: 283 TFTILVDGLCKEGMILEARRVFEMMTENGVEPDAYTYSALMDGYCLQSQMDEAQKLFDIM 342

Query: 422 QVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHL 481
              G  P    Y  LI+ H K+  L+ A  +  +M    L+PDT TYS ++    +AG  
Sbjct: 343 VGKGFAPSVRVYNILINGHCKSRRLNEAKTLLSEMYDRDLTPDTVTYSTLMQGFCQAGRP 402

Query: 482 QAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIV 541
           Q A +LF EM + G +P+ +TY+I++    K  +   A +L + MQ +  EP    Y+I+
Sbjct: 403 QVAQKLFKEMCSYGLLPDSITYSILLDGLCKHGHLDEAFRLLKAMQESKIEPHICIYNIL 462

Query: 542 MEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGL 601
           ++ + + G L+ A  +F+ +  K   P    Y +++    K G   +A E +  M+  G 
Sbjct: 463 IQGMCNFGKLEAARELFSNLFVKGIQPSVVTYTVMISGLLKEGLSNEACEMFRKMVVNGC 522

Query: 602 RPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
            PN  T N  +  FLR G  S+A  L++ M+  G      T+ +LL
Sbjct: 523 LPNSCTYNVAIQGFLRNGDPSNAVRLIEEMVGRGFSADSSTFQMLL 568



 Score =  125 bits (314), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 101/407 (24%), Positives = 171/407 (42%), Gaps = 10/407 (2%)

Query: 383 LDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAK 442
           L +M + G QP  VT+  L++       + +A+ +F ++  +G  P  +TY T+I    K
Sbjct: 129 LGKMFKLGLQPTHVTFGTLLNGLCSKAKIIDAVKLFDEIGKMGFAPSLITYTTIIKGLCK 188

Query: 443 AGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVT 502
            G    A+ + KKM+  G  PD   Y+ +I+ L K      A   F EMV+QG  PN+VT
Sbjct: 189 IGHTTNALQLLKKMEEKGCKPDVVAYNTVIDSLCKDRRANEAMYFFSEMVDQGIPPNVVT 248

Query: 503 YNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMR 562
           Y+ ++           A  L++ M      P+ VT++I+++ L   G + EA  VF  M 
Sbjct: 249 YSSILHGFCNLGQLNEATSLFKQMIGRNVMPNTVTFTILVDGLCKEGMILEARRVFEMMT 308

Query: 563 RKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLS 622
                PD   Y  L+D +     + +A + ++ M+  G  P+V   N L++   +  +L+
Sbjct: 309 ENGVEPDAYTYSALMDGYCLQSQMDEAQKLFDIMVGKGFAPSVRVYNILINGHCKSRRLN 368

Query: 623 DAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGFCHELMAVSGHPAHMFLLSMPS 682
           +A  LL  M +  L P   TY+ L+    +A  P       + M   G        S+  
Sbjct: 369 EAKTLLSEMYDRDLTPDTVTYSTLMQGFCQAGRPQVAQKLFKEMCSYGLLPDSITYSILL 428

Query: 683 PGPDGQNVRDHVGSFLEMMHSEDRESKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVY 742
            G       D     L+ M     E    + + ++  +   G  E A  ++     K + 
Sbjct: 429 DGLCKHGHLDEAFRLLKAMQESKIEPHICIYNILIQGMCNFGKLEAARELFSNLFVKGIQ 488

Query: 743 PDAVKEKGMSYWLINLHVMSDGTAVIALSRTLAWFRKQMLISGVGPS 789
           P  V             VM  G     LS       ++M+++G  P+
Sbjct: 489 PSVVTYT----------VMISGLLKEGLSNEACEMFRKMVVNGCLPN 525



 Score =  123 bits (309), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 78/260 (30%), Positives = 129/260 (49%)

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
           + G + D +TY+ ++       Q     KL D MV  G  P+V  YN LI+ + ++  LN
Sbjct: 309 ENGVEPDAYTYSALMDGYCLQSQMDEAQKLFDIMVGKGFAPSVRVYNILINGHCKSRRLN 368

Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
           EA  +  +M      PD VTY TL+    +AG   VA  ++K+M + GL PD+ TYS+++
Sbjct: 369 EAKTLLSEMYDRDLTPDTVTYSTLMQGFCQAGRPQVAQKLFKEMCSYGLLPDSITYSILL 428

Query: 473 NCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFE 532
           + L K GHL  A +L   M      P++  YNI+I         ++A +L+ ++   G +
Sbjct: 429 DGLCKHGHLDEAFRLLKAMQESKIEPHICIYNILIQGMCNFGKLEAARELFSNLFVKGIQ 488

Query: 533 PDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEW 592
           P  VTY++++  L   G  +EA  +F +M     +P+   Y + +  + + G+   A   
Sbjct: 489 PSVVTYTVMISGLLKEGLSNEACEMFRKMVVNGCLPNSCTYNVAIQGFLRNGDPSNAVRL 548

Query: 593 YEAMLQAGLRPNVPTCNSLL 612
            E M+  G   +  T   LL
Sbjct: 549 IEEMVGRGFSADSSTFQMLL 568



 Score =  107 bits (267), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 81/357 (22%), Positives = 160/357 (44%), Gaps = 4/357 (1%)

Query: 393 PNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDM 452
           P+ +T      +Y   + + +A+  F Q+  +   P  V +  L+    K       + +
Sbjct: 32  PSSITNGGFCSNYNNLHSVADAVASFNQLLGIRPLPPVVVFNKLLGSLVKKKHYSTVISL 91

Query: 453 YKKMQAAGLSPDTFTYSVIINCLGKAG--HLQAAHQLFCEMVNQGCIPNLVTYNIMI-AL 509
            K+M  + + P+ +T +++INCL  +   H+  A     +M   G  P  VT+  ++  L
Sbjct: 92  CKQMDLSNIRPNVYTLTILINCLCHSNRDHVHFAFSALGKMFKLGLQPTHVTFGTLLNGL 151

Query: 510 QAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPD 569
            +KA+    A+KL+ ++   GF P  +TY+ +++ L   G+   A  +  +M  K   PD
Sbjct: 152 CSKAK-IIDAVKLFDEIGKMGFAPSLITYTTIIKGLCKIGHTTNALQLLKKMEEKGCKPD 210

Query: 570 EPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQ 629
              Y  ++D   K     +A  ++  M+  G+ PNV T +S+L  F  +GQL++A  L +
Sbjct: 211 VVAYNTVIDSLCKDRRANEAMYFFSEMVDQGIPPNVVTYSSILHGFCNLGQLNEATSLFK 270

Query: 630 GMLNLGLKPSLQTYTLLLSCCTEARSPYDMGFCHELMAVSGHPAHMFLLSMPSPGPDGQN 689
            M+   + P+  T+T+L+    +     +     E+M  +G     +  S    G   Q+
Sbjct: 271 QMIGRNVMPNTVTFTILVDGLCKEGMILEARRVFEMMTENGVEPDAYTYSALMDGYCLQS 330

Query: 690 VRDHVGSFLEMMHSEDRESKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAV 746
             D      ++M  +       + + +++   KS    EA ++      +++ PD V
Sbjct: 331 QMDEAQKLFDIMVGKGFAPSVRVYNILINGHCKSRRLNEAKTLLSEMYDRDLTPDTV 387



 Score = 66.2 bits (160), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 44/157 (28%), Positives = 74/157 (47%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           G   D  TY+ ++  L +        +LL  M     +P++  YN LI        L  A
Sbjct: 416 GLLPDSITYSILLDGLCKHGHLDEAFRLLKAMQESKIEPHICIYNILIQGMCNFGKLEAA 475

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
            ++F  + V G +P  VTY  +I    K G  + A +M++KM   G  P++ TY+V I  
Sbjct: 476 RELFSNLFVKGIQPSVVTYTVMISGLLKEGLSNEACEMFRKMVVNGCLPNSCTYNVAIQG 535

Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQA 511
             + G    A +L  EMV +G   +  T+ +++ L++
Sbjct: 536 FLRNGDPSNAVRLIEEMVGRGFSADSSTFQMLLDLES 572


>gi|224133034|ref|XP_002327945.1| predicted protein [Populus trichocarpa]
 gi|222837354|gb|EEE75733.1| predicted protein [Populus trichocarpa]
          Length = 1450

 Score =  164 bits (414), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 92/330 (27%), Positives = 175/330 (53%), Gaps = 3/330 (0%)

Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLI 402
           A   + WL  +  +  +    +T++ +LG+A Q     ++  +      +  V  YN ++
Sbjct: 205 AFEVYEWLNLRHWYSPNARMLSTILAVLGKANQEPLAVEVFTR-AEPSVENTVKVYNAMM 263

Query: 403 HSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFL--DVAMDMYKKMQAAG 460
             Y R+   N+  ++F  M+  GCEPD V++ TLI+   KAG +  ++A+++  +++ +G
Sbjct: 264 GVYARSGKFNKVQELFDLMRERGCEPDLVSFNTLINARLKAGEMTPNLAIELLTEVRRSG 323

Query: 461 LSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSAL 520
           L PD  TY+ +I+   +A +L+ A  +F +MV   C P+L TYN MI++  +      A 
Sbjct: 324 LRPDIITYNTLISACSRASNLEEAVNVFDDMVAHHCEPDLWTYNAMISVYGRCGLSGKAE 383

Query: 521 KLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLW 580
           +L+ D+++ GF PD V+Y+  +      G +++ + +  EM +  +  DE  Y  ++ ++
Sbjct: 384 QLFNDLESRGFFPDAVSYNSFLYAFAREGNVEKVKDICEEMVKIGFGKDEMTYNTMIHMY 443

Query: 581 GKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSL 640
           GK G    A + Y  M  +G  P+V T   L+ +  +  ++ +A  ++  MLN G+KP+L
Sbjct: 444 GKQGQNDLALQLYRDMKSSGRNPDVITYTVLIDSLGKTNKIEEAAGMMSEMLNTGVKPTL 503

Query: 641 QTYTLLLSCCTEARSPYDMGFCHELMAVSG 670
           +TY+ L+    +A  P +     + M  SG
Sbjct: 504 RTYSALICGYAKAGKPVEAEETFDCMLRSG 533



 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 94/314 (29%), Positives = 164/314 (52%), Gaps = 4/314 (1%)

Query: 350 LRRQAGFKHDEHTYTTMVGILGRARQFG---AINKLLDQMVRDGCQPNVVTYNRLIHSYG 406
           L R+ G + D  ++ T++    +A +     AI +LL ++ R G +P+++TYN LI +  
Sbjct: 281 LMRERGCEPDLVSFNTLINARLKAGEMTPNLAI-ELLTEVRRSGLRPDIITYNTLISACS 339

Query: 407 RANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTF 466
           RA+ L EA++VF  M    CEPD  TY  +I ++ + G    A  ++  +++ G  PD  
Sbjct: 340 RASNLEEAVNVFDDMVAHHCEPDLWTYNAMISVYGRCGLSGKAEQLFNDLESRGFFPDAV 399

Query: 467 TYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDM 526
           +Y+  +    + G+++    +  EMV  G   + +TYN MI +  K      AL+LYRDM
Sbjct: 400 SYNSFLYAFAREGNVEKVKDICEEMVKIGFGKDEMTYNTMIHMYGKQGQNDLALQLYRDM 459

Query: 527 QNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNV 586
           +++G  PD +TY+++++ LG    ++EA  + +EM      P    Y  L+  + KAG  
Sbjct: 460 KSSGRNPDVITYTVLIDSLGKTNKIEEAAGMMSEMLNTGVKPTLRTYSALICGYAKAGKP 519

Query: 587 RKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLL 646
            +A E ++ ML++G RP+    + +L   LR  +   A    + M++ G+ P    Y L+
Sbjct: 520 VEAEETFDCMLRSGTRPDQLAYSVMLDIHLRFNEPKRAMTFYKEMIHDGIMPEHSLYELM 579

Query: 647 LSCCTEARSPYDMG 660
           L     A    D+G
Sbjct: 580 LRTLGNANKVEDIG 593



 Score =  135 bits (340), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 81/300 (27%), Positives = 143/300 (47%), Gaps = 1/300 (0%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           R++G + D  TY T++    RA        + D MV   C+P++ TYN +I  YGR    
Sbjct: 320 RRSGLRPDIITYNTLISACSRASNLEEAVNVFDDMVAHHCEPDLWTYNAMISVYGRCGLS 379

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
            +A  +F  ++  G  PD V+Y + +   A+ G ++   D+ ++M   G   D  TY+ +
Sbjct: 380 GKAEQLFNDLESRGFFPDAVSYNSFLYAFAREGNVEKVKDICEEMVKIGFGKDEMTYNTM 439

Query: 472 INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF 531
           I+  GK G    A QL+ +M + G  P+++TY ++I    K    + A  +  +M N G 
Sbjct: 440 IHMYGKQGQNDLALQLYRDMKSSGRNPDVITYTVLIDSLGKTNKIEEAAGMMSEMLNTGV 499

Query: 532 EPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWE 591
           +P   TYS ++      G   EAE  F  M R    PD+  Y +++D+  +    ++A  
Sbjct: 500 KPTLRTYSALICGYAKAGKPVEAEETFDCMLRSGTRPDQLAYSVMLDIHLRFNEPKRAMT 559

Query: 592 WYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNL-GLKPSLQTYTLLLSCC 650
           +Y+ M+  G+ P       +L       ++ D   +++ M  + G+ P   +Y L+   C
Sbjct: 560 FYKEMIHDGIMPEHSLYELMLRTLGNANKVEDIGRVVRDMEEVCGMNPQAISYILVKGDC 619



 Score =  114 bits (285), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 104/503 (20%), Positives = 200/503 (39%), Gaps = 66/503 (13%)

Query: 352  RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
            + AG+    H Y  M  +L R +Q   +  +L +M   G +P++  +N ++  Y   +  
Sbjct: 912  KAAGYFPSMHLYRVMAQLLCRGKQVRDVEAMLSEMEEAGFKPDLSIWNSVLKMYVAIDDF 971

Query: 412  NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
             +   ++++++  G EPD  TY  LI ++ +       + +  +M+  GL P   TY  +
Sbjct: 972  RKTTQIYQRIKEDGLEPDEDTYNILIVMYCRDHRPKEGLVLMDEMRTVGLEPKLDTYKSL 1031

Query: 472  INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF 531
            +   GK   ++ A +LF E+ + GC  +   Y+IM+ +   + ++  A +L+  M++ G 
Sbjct: 1032 VASFGKQQLVEQAEELFEELQSTGCKLDRSFYHIMMKIYRNSGSHSKAQRLFSMMKDEGV 1091

Query: 532  EPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWE 591
            EP   T  ++M   G  G   EAE V + ++  +       Y  ++D + + G+     +
Sbjct: 1092 EPTIATMHLLMVSYGSSGQPQEAEKVLSNLKETDANLSTLPYSSVIDAYVRNGDYNAGIQ 1151

Query: 592  WYEAMLQAGLRPNVPTCNSLLSAFLRVGQL----SDAYHLLQGMLNLGLKPSLQTYTLLL 647
              + + + GL P+    + + + F+R   L    S+A  LL  + + G       + L +
Sbjct: 1152 KLKQVKEEGLEPD----HRIWTCFIRAASLSQHTSEAILLLNALRDTG-------FDLPI 1200

Query: 648  SCCTEARSPY--DMGFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSED 705
               TE   P    +  C E++   G  A                                
Sbjct: 1201 RLLTEKPEPLVSALDLCLEMLETLGDNAAF------------------------------ 1230

Query: 706  RESKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAVKEKGMSYWLINLHVMSDGT 765
                   V+A+ D L    L+  A  V+ +A ++ +Y   V       W  +   +S G 
Sbjct: 1231 -----NFVNALEDLLWAFELRATASWVFLLAIKRKIYRHDVFRVADKDWGADFRKLSGGA 1285

Query: 766  AVIALSRTLAWFRKQMLISGVGPSRIDIVTGWGRRSRVTGTSLVRQAVQELLHMFSFPFF 825
            A+ A           +      P  + ++TG    + V+  S ++  + E+      PF 
Sbjct: 1286 ALDA----------SLQGCPESPKSVALITGTAEYNMVSLDSTLKACLWEM----GSPFL 1331

Query: 826  TENGNSGCFVGCGEPLNKWLLQS 848
                 SG  +     L  WL  S
Sbjct: 1332 PCKTRSGLLIAKAHSLKMWLKDS 1354



 Score = 94.4 bits (233), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 71/298 (23%), Positives = 137/298 (45%), Gaps = 1/298 (0%)

Query: 352  RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDG-CQPNVVTYNRLIHSYGRANY 410
            R  G K  E  Y +M+ +  +       + L+D    DG    N+  Y  +I +YGR   
Sbjct: 736  RFCGIKASECLYQSMMLLYCKMGFPETAHHLIDLTETDGTVLNNISVYVDVIEAYGRLKL 795

Query: 411  LNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSV 470
              +A  V   M+      +R  +  LI+ +A +G  + A  ++  M   G SP   + + 
Sbjct: 796  WQKAESVAGNMRQSCITVNRKVWNALIEAYAASGCYERARAVFNTMMKDGPSPTVDSING 855

Query: 471  IINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAG 530
            ++  L   G L+  + +  E+ + G   +  +  +M+   A+A N     K+Y  M+ AG
Sbjct: 856  LLQALIVDGRLEELYVVVQELQDIGFKISKSSILLMLDAFARAGNIFEVKKIYHGMKAAG 915

Query: 531  FEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAW 590
            + P    Y ++ ++L     + + EA+ +EM    + PD  ++  ++ ++    + RK  
Sbjct: 916  YFPSMHLYRVMAQLLCRGKQVRDVEAMLSEMEEAGFKPDLSIWNSVLKMYVAIDDFRKTT 975

Query: 591  EWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
            + Y+ + + GL P+  T N L+  + R  +  +   L+  M  +GL+P L TY  L++
Sbjct: 976  QIYQRIKEDGLEPDEDTYNILIVMYCRDHRPKEGLVLMDEMRTVGLEPKLDTYKSLVA 1033



 Score = 77.0 bits (188), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 53/286 (18%), Positives = 120/286 (41%)

Query: 362  TYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQM 421
             Y  ++   GR + +     +   M +     N   +N LI +Y  +     A  VF  M
Sbjct: 782  VYVDVIEAYGRLKLWQKAESVAGNMRQSCITVNRKVWNALIEAYAASGCYERARAVFNTM 841

Query: 422  QVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHL 481
               G  P   +   L+      G L+    + +++Q  G      +  ++++   +AG++
Sbjct: 842  MKDGPSPTVDSINGLLQALIVDGRLEELYVVVQELQDIGFKISKSSILLMLDAFARAGNI 901

Query: 482  QAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIV 541
                +++  M   G  P++  Y +M  L  + +  +    +  +M+ AGF+PD   ++ V
Sbjct: 902  FEVKKIYHGMKAAGYFPSMHLYRVMAQLLCRGKQVRDVEAMLSEMEEAGFKPDLSIWNSV 961

Query: 542  MEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGL 601
            +++        +   ++  ++     PDE  Y +L+ ++ +    ++     + M   GL
Sbjct: 962  LKMYVAIDDFRKTTQIYQRIKEDGLEPDEDTYNILIVMYCRDHRPKEGLVLMDEMRTVGL 1021

Query: 602  RPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
             P + T  SL+++F +   +  A  L + + + G K     Y +++
Sbjct: 1022 EPKLDTYKSLVASFGKQQLVEQAEELFEELQSTGCKLDRSFYHIMM 1067



 Score = 75.1 bits (183), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 70/297 (23%), Positives = 129/297 (43%), Gaps = 7/297 (2%)

Query: 414 ALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIIN 473
           ALD+ + ++       ++    L+ +  KA  LD A+  Y   +  G +     +  +I 
Sbjct: 658 ALDLLELLKEHTPRSSQMITEALVVMLCKAQQLDTALKEYSNSRELGFTGSFTMFEALIQ 717

Query: 474 CLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEP 533
           C  +      A Q+F +M   G   +   Y  M+ L  K    ++A  L    +  G   
Sbjct: 718 CCLENELFTEASQVFSDMRFCGIKASECLYQSMMLLYCKMGFPETAHHLIDLTETDGTVL 777

Query: 534 DKVT-YSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEW 592
           + ++ Y  V+E  G      +AE+V   MR+     +  V+  L++ +  +G   +A   
Sbjct: 778 NNISVYVDVIEAYGRLKLWQKAESVAGNMRQSCITVNRKVWNALIEAYAASGCYERARAV 837

Query: 593 YEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTE 652
           +  M++ G  P V + N LL A +  G+L + Y ++Q + ++G K S  +  L+L     
Sbjct: 838 FNTMMKDGPSPTVDSINGLLQALIVDGRLEELYVVVQELQDIGFKISKSSILLMLDAFAR 897

Query: 653 ARSPYDMGFCHELMAVSGHPAHMFLLS-MPSPGPDGQNVRDHVGSFLEMMHSEDRES 708
           A + +++   +  M  +G+   M L   M      G+ VRD     +E M SE  E+
Sbjct: 898 AGNIFEVKKIYHGMKAAGYFPSMHLYRVMAQLLCRGKQVRD-----VEAMLSEMEEA 949


>gi|302761794|ref|XP_002964319.1| hypothetical protein SELMODRAFT_63559 [Selaginella moellendorffii]
 gi|300168048|gb|EFJ34652.1| hypothetical protein SELMODRAFT_63559 [Selaginella moellendorffii]
          Length = 384

 Score =  164 bits (414), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 92/260 (35%), Positives = 142/260 (54%)

Query: 362 TYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQM 421
           TY  ++   GR   F    +L D+M   GC  +V TYN  I  YG+   L +   +  +M
Sbjct: 125 TYNALIQGYGRKGLFKEALELYDEMDGVGCAKDVHTYNIAIAMYGKRGLLEDMERLLDEM 184

Query: 422 QVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHL 481
              G  PD+VTY TL+D++AK  +   A ++ ++M  AG  P+ +TY+++++   K   +
Sbjct: 185 DTKGVPPDQVTYNTLLDVYAKKSYFVKAHEILREMTEAGYRPNIWTYNIMLSSARKEQSV 244

Query: 482 QAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIV 541
             A QLF  + ++G +PN+VTY+ M++L  +   Y  A KL+ +M  AG  P  + YS +
Sbjct: 245 AEATQLFENLKSKGVVPNIVTYSAMLSLYGRHGLYTEAAKLWDEMIEAGCIPCIIAYSGL 304

Query: 542 MEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGL 601
           +E  GH G   EA A F +MR+   VPD  +Y  L+D +GKAG  R+A   Y  M + G 
Sbjct: 305 IESYGHHGMYQEALACFQDMRKSGIVPDTKIYTALMDAYGKAGRCREAELLYFEMTKEGF 364

Query: 602 RPNVPTCNSLLSAFLRVGQL 621
            P+  T   L+ AF   G+L
Sbjct: 365 VPDGITYGILVRAFANAGRL 384



 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 98/338 (28%), Positives = 164/338 (48%), Gaps = 16/338 (4%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           +++G K DE  Y  +V  L  + +  A  K+LD M +D    N+VTY  LI  Y  A  L
Sbjct: 45  KESGKKPDEILYNCLVNGLVNSGRLEAAEKILDDMKQDKVSANLVTYTNLIKEYANAGRL 104

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
            +   +F++M+  G  P+  TY  LI  + + G    A+++Y +M   G + D  TY++ 
Sbjct: 105 QDCRKLFQEMKDKGESPNSWTYNALIQGYGRKGLFKEALELYDEMDGVGCAKDVHTYNIA 164

Query: 472 INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF 531
           I   GK G L+   +L  EM  +G  P+ VTYN ++ + AK   +  A ++ R+M  AG+
Sbjct: 165 IAMYGKRGLLEDMERLLDEMDTKGVPPDQVTYNTLLDVYAKKSYFVKAHEILREMTEAGY 224

Query: 532 EPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWE 591
            P+  TY+I++        + EA  +F  ++ K  VP+   Y  ++ L+G+ G   +A +
Sbjct: 225 RPNIWTYNIMLSSARKEQSVAEATQLFENLKSKGVVPNIVTYSAMLSLYGRHGLYTEAAK 284

Query: 592 WYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCT 651
            ++ M++AG  P +   + L+ ++   G   +A    Q M   G+ P  + YT L+    
Sbjct: 285 LWDEMIEAGCIPCIIAYSGLIESYGHHGMYQEALACFQDMRKSGIVPDTKIYTALMDAYG 344

Query: 652 EARSPYDMGFCHELMAVSGHPAHMFLLSMPSPG--PDG 687
           +A      G C E        A +    M   G  PDG
Sbjct: 345 KA------GRCRE--------AELLYFEMTKEGFVPDG 368



 Score =  149 bits (377), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 89/268 (33%), Positives = 146/268 (54%), Gaps = 1/268 (0%)

Query: 382 LLDQMVRDGCQPNVVTYNRLIHSYGR-ANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIH 440
           L  +M++DGC+  VVTY  +IH Y R  + L+ AL + + M+  G +PD + Y  L++  
Sbjct: 4   LFYRMMKDGCEATVVTYTVIIHGYLRQKSKLDHALRLLEVMKESGKKPDEILYNCLVNGL 63

Query: 441 AKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNL 500
             +G L+ A  +   M+   +S +  TY+ +I     AG LQ   +LF EM ++G  PN 
Sbjct: 64  VNSGRLEAAEKILDDMKQDKVSANLVTYTNLIKEYANAGRLQDCRKLFQEMKDKGESPNS 123

Query: 501 VTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAE 560
            TYN +I    +   ++ AL+LY +M   G   D  TY+I + + G  G L++ E +  E
Sbjct: 124 WTYNALIQGYGRKGLFKEALELYDEMDGVGCAKDVHTYNIAIAMYGKRGLLEDMERLLDE 183

Query: 561 MRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQ 620
           M  K   PD+  Y  L+D++ K     KA E    M +AG RPN+ T N +LS+  +   
Sbjct: 184 MDTKGVPPDQVTYNTLLDVYAKKSYFVKAHEILREMTEAGYRPNIWTYNIMLSSARKEQS 243

Query: 621 LSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
           +++A  L + + + G+ P++ TY+ +LS
Sbjct: 244 VAEATQLFENLKSKGVVPNIVTYSAMLS 271



 Score =  111 bits (277), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 69/243 (28%), Positives = 121/243 (49%), Gaps = 1/243 (0%)

Query: 414 ALDVFKQMQVVGCEPDRVTYCTLIDIHAK-AGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
           A  +F +M   GCE   VTY  +I  + +    LD A+ + + M+ +G  PD   Y+ ++
Sbjct: 1   ACSLFYRMMKDGCEATVVTYTVIIHGYLRQKSKLDHALRLLEVMKESGKKPDEILYNCLV 60

Query: 473 NCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFE 532
           N L  +G L+AA ++  +M       NLVTY  +I   A A   Q   KL+++M++ G  
Sbjct: 61  NGLVNSGRLEAAEKILDDMKQDKVSANLVTYTNLIKEYANAGRLQDCRKLFQEMKDKGES 120

Query: 533 PDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEW 592
           P+  TY+ +++  G  G   EA  ++ EM       D   Y + + ++GK G +      
Sbjct: 121 PNSWTYNALIQGYGRKGLFKEALELYDEMDGVGCAKDVHTYNIAIAMYGKRGLLEDMERL 180

Query: 593 YEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTE 652
            + M   G+ P+  T N+LL  + +      A+ +L+ M   G +P++ TY ++LS   +
Sbjct: 181 LDEMDTKGVPPDQVTYNTLLDVYAKKSYFVKAHEILREMTEAGYRPNIWTYNIMLSSARK 240

Query: 653 ARS 655
            +S
Sbjct: 241 EQS 243


>gi|359475765|ref|XP_002273555.2| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
           mitochondrial-like [Vitis vinifera]
          Length = 935

 Score =  164 bits (414), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 115/395 (29%), Positives = 177/395 (44%), Gaps = 5/395 (1%)

Query: 362 TYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQM 421
           +Y  M+  L   +     NKLL++M   G +PNVV Y+ LI  Y     + EA  +   M
Sbjct: 351 SYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSTLIMGYASEGRIEEARRLLDGM 410

Query: 422 QVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHL 481
              G  PD   Y  +I   +KAG ++ A     ++Q  GL PD  T+   I    K G +
Sbjct: 411 SCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKM 470

Query: 482 QAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIV 541
             A + F EM++ G +PN   Y ++I    KA N   AL ++R +   G  PD  T S  
Sbjct: 471 TEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRHLHALGVLPDVQTCSAF 530

Query: 542 MEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGL 601
           +  L   G + EA  VF+E++ K  VPD   Y  L+  + K G V KA+E ++ M   G+
Sbjct: 531 IHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGI 590

Query: 602 RPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTY-TLLLSCCTEARSPYDMG 660
            PN+   N+L+    + G +  A  L  GM   GL+P   TY T++   C          
Sbjct: 591 APNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFS 650

Query: 661 FCHELMAVSGHPAHMFLLSMPSPGPDGQ-NVRDHVGSFLEMMHSEDRESKRGLVDAVVDF 719
             HE M   G   H F+ +    G   + ++   +  F EM+      +     + ++D 
Sbjct: 651 LFHE-MPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGFATTLS--FNTLIDG 707

Query: 720 LHKSGLKEEAGSVWEVAAQKNVYPDAVKEKGMSYW 754
             KS   +EA  +++    K + PD V    +  W
Sbjct: 708 YCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDW 742



 Score =  145 bits (365), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 102/412 (24%), Positives = 183/412 (44%), Gaps = 24/412 (5%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           ++ G K D +  + ++    R      + ++ D MV  G   N++TYN LIH   +   +
Sbjct: 236 QKTGLKPDYNACSALIDGFMREGDIDEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKM 295

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
            +A ++ K M  +GC+P+  T+C LI+ + +   +  A+++  +M+   L P   +Y  +
Sbjct: 296 EKAAEILKGMITLGCKPNSRTFCLLIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAM 355

Query: 472 INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF 531
           IN L     L  A++L  +M   G  PN+V Y+ +I   A     + A +L   M  +G 
Sbjct: 356 INGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSTLIMGYASEGRIEEARRLLDGMSCSGV 415

Query: 532 EPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWE 591
            PD   Y+ ++  L   G ++EA     E++ +   PD   +G  +  + K G + +A +
Sbjct: 416 APDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAK 475

Query: 592 WYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCT 651
           +++ ML  GL PN P    L++   + G L +A  + + +  LG+ P +QT      C  
Sbjct: 476 YFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRHLHALGVLPDVQT------CSA 529

Query: 652 EARSPYDMGFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSE------D 705
                   G   E + V        L+      PD       +  F +    E      D
Sbjct: 530 FIHGLLKNGRVQEALKVFSELKEKGLV------PDVFTYSSLISGFCKQGEVEKAFELHD 583

Query: 706 RESKRGLV------DAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAVKEKGM 751
               +G+       +A+VD L KSG  + A  +++   +K + PD+V    M
Sbjct: 584 EMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTM 635



 Score =  139 bits (349), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 116/478 (24%), Positives = 201/478 (42%), Gaps = 60/478 (12%)

Query: 354 AGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNE 413
           +G   D   Y  ++  L +A +    +  L ++   G +P+ VT+   I  Y +   + E
Sbjct: 413 SGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTE 472

Query: 414 ALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIIN 473
           A   F +M   G  P+   Y  LI+ H KAG L  A+ +++ + A G+ PD  T S  I+
Sbjct: 473 AAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRHLHALGVLPDVQTCSAFIH 532

Query: 474 CLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEP 533
            L K G +Q A ++F E+  +G +P++ TY+ +I+   K    + A +L+ +M   G  P
Sbjct: 533 GLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAP 592

Query: 534 DKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWY 593
           +   Y+ +++ L   G +  A  +F  M  K   PD   Y  ++D + K+ NV +A+  +
Sbjct: 593 NIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLF 652

Query: 594 EAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEA 653
             M   G++P+    N+L+    + G +  A +L + ML  G   +L   TL+   C   
Sbjct: 653 HEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGFATTLSFNTLIDGYCKSC 712

Query: 654 RSPYDMGFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRESKRGLV 713
           +         E++A    P                   DHV                   
Sbjct: 713 KIQEASQLFQEMIAKQIMP-------------------DHVT-----------------Y 736

Query: 714 DAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAVKEKGMSYWLINLHVMSDGTAVIALSRT 773
             V+D+  K+G  EEA  +++   ++N+  D V    + Y    L     G +    S  
Sbjct: 737 TTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVTYTSLMYGYNKL-----GQS----SEV 787

Query: 774 LAWFRKQMLISGVGPSRI-------------DIVTGWGRRSRVTGTS-LVRQAVQELL 817
            A F K M+  GV P  +             ++V  +  R  V G   L +  + +LL
Sbjct: 788 FALFEK-MVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGMLTKGTIHDLL 844



 Score =  138 bits (348), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 111/410 (27%), Positives = 186/410 (45%), Gaps = 37/410 (9%)

Query: 329 QANQVLKQLQDHTVALGFFNWLRRQAGF-----------KHDE----------HTYTTMV 367
           +A +V  +L++  +    F +    +GF            HDE            Y  +V
Sbjct: 542 EALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALV 601

Query: 368 GILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCE 427
             L ++       KL D M   G +P+ VTY+ +I  Y ++  + EA  +F +M   G +
Sbjct: 602 DGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQ 661

Query: 428 PDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQL 487
           P    Y  L+    K G ++ AM+++++M   G +  T +++ +I+   K+  +Q A QL
Sbjct: 662 PHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGFAT-TLSFNTLIDGYCKSCKIQEASQL 720

Query: 488 FCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGH 547
           F EM+ +  +P+ VTY  +I    KA   + A  L+++MQ      D VTY+ +M     
Sbjct: 721 FQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVTYTSLMYGYNK 780

Query: 548 CGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPT 607
            G   E  A+F +M  K   PDE  YGL++    K  N+ +A++  + ++  G+      
Sbjct: 781 LGQSSEVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGMLTKGTI 840

Query: 608 CNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGFCHELMA 667
            + L++A  +   L++A  LL  M  LGLKPSL       +C T  RS ++ G   E   
Sbjct: 841 HDLLITALCKREDLTEASKLLDEMGELGLKPSLA------ACSTLVRSFHEAGKMDEATR 894

Query: 668 VSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRESKRGLVDAVV 717
           V      + L+      PD   + D V   L   +  D E  R L+  +V
Sbjct: 895 VFEGVKSLGLV------PDTTTLIDLVNGNL---NDTDSEDARNLIKQLV 935



 Score =  125 bits (313), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 100/401 (24%), Positives = 177/401 (44%), Gaps = 43/401 (10%)

Query: 292 ASTGNVVESVSRILRQWKWGPLAEEALGNTNYSMDAYQANQVLKQLQDHTVALGFFNWLR 351
           + T N  + +S  L+Q  W  +   +   +  + D  +A     Q+ D    L FF W +
Sbjct: 36  SETLNFSQQISDFLKQNNWKTIMVSSHIPSKLNPDVIRAVLHQNQVGDPKRLLDFFYWSQ 95

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRD-------------------GCQ 392
            Q G      +++ +   L  +  FG  N +L QM+R                    G  
Sbjct: 96  SQMGVPQFLDSFSILAVQLCNSELFGLANGVLTQMIRTPYSSSSILDSVLFWFRNYGGSS 155

Query: 393 PNVVTYNRLIHSYGRANYLNEALDVF------------------KQMQVVGCEPDRVTYC 434
           P  V ++ LI SY R   L+EA +VF                  + M   G  P+  TY 
Sbjct: 156 P--VVFDILIDSYKRMGMLDEAANVFFVAKNDSILISLIRCNSLRSMGEKGLVPNTYTYT 213

Query: 435 TLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQ 494
            +     +A  ++ A   +++MQ  GL PD    S +I+   + G +    ++   MV+ 
Sbjct: 214 IITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGDIDEVLRIKDVMVSC 273

Query: 495 GCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGY--LD 552
           G   NL+TYN++I    K    + A ++ + M   G +P+  T+ +++E  G+C    + 
Sbjct: 274 GIPINLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRTFCLLIE--GYCREHNMG 331

Query: 553 EAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLL 612
            A  +  EM ++N VP    YG +++      ++  A +  E M  +GL+PNV   ++L+
Sbjct: 332 RALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSTLI 391

Query: 613 SAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEA 653
             +   G++ +A  LL GM   G+ P +  Y  ++SC ++A
Sbjct: 392 MGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKA 432



 Score =  122 bits (306), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 97/375 (25%), Positives = 163/375 (43%), Gaps = 24/375 (6%)

Query: 383 LDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAK 442
           L  M   G  PN  TY  +     RA  +NEA   F++MQ  G +PD      LID   +
Sbjct: 197 LRSMGEKGLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMR 256

Query: 443 AGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVT 502
            G +D  + +   M + G+  +  TY+V+I+ L K G ++ A ++   M+  GC PN  T
Sbjct: 257 EGDIDEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRT 316

Query: 503 YNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMR 562
           + ++I    +  N   AL+L  +M+     P  V+Y  ++  L HC  L  A  +  +M 
Sbjct: 317 FCLLIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMT 376

Query: 563 RKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLS 622
                P+  VY  L+  +   G + +A    + M  +G+ P++   N+++S   + G++ 
Sbjct: 377 FSGLKPNVVVYSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKME 436

Query: 623 DAYHLLQGMLNLGLKPSLQTYTLLL------SCCTEARSPYDMGFCHELMAVSGHPAHMF 676
           +A   L  +   GLKP   T+   +         TEA   +D    H LM    +P +  
Sbjct: 437 EASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMP--NNPLYTV 494

Query: 677 LLSMPSPGPDGQNVRDHVGSFLEMMHSEDRESKRGL---VDAVVDFLH---KSGLKEEAG 730
           L+          N     G+ +E +         G+   V     F+H   K+G  +EA 
Sbjct: 495 LI----------NGHFKAGNLMEALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEAL 544

Query: 731 SVWEVAAQKNVYPDA 745
            V+    +K + PD 
Sbjct: 545 KVFSELKEKGLVPDV 559



 Score =  111 bits (277), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 73/296 (24%), Positives = 139/296 (46%)

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
           + G   + +TYT +   L RA++        ++M + G +P+    + LI  + R   ++
Sbjct: 202 EKGLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGDID 261

Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
           E L +   M   G   + +TY  LI    K G ++ A ++ K M   G  P++ T+ ++I
Sbjct: 262 EVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRTFCLLI 321

Query: 473 NCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFE 532
               +  ++  A +L  EM  +  +P+ V+Y  MI      ++   A KL   M  +G +
Sbjct: 322 EGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLK 381

Query: 533 PDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEW 592
           P+ V YS ++      G ++EA  +   M      PD   Y  ++    KAG + +A  +
Sbjct: 382 PNVVVYSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTY 441

Query: 593 YEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
              +   GL+P+  T  + +  + + G++++A      ML+ GL P+   YT+L++
Sbjct: 442 LLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLIN 497


>gi|357124917|ref|XP_003564143.1| PREDICTED: pentatricopeptide repeat-containing protein At3g18110,
           chloroplastic-like [Brachypodium distachyon]
          Length = 1285

 Score =  164 bits (414), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 95/310 (30%), Positives = 170/310 (54%), Gaps = 8/310 (2%)

Query: 361 HTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL--NEALDVF 418
             +  M+G+  R+ +F  + +LLD M     +P++V++N LI++  ++  L    A D+ 
Sbjct: 64  QVFNAMMGVYARSGRFDDVRQLLDAMRGQELEPDLVSFNTLINARAKSGCLAPGSAFDLL 123

Query: 419 KQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKA 478
            +++ VG  PD +TY TLI   ++   LD A+ ++++M A+   PD +TY+ +++  G+ 
Sbjct: 124 LEVRQVGLRPDVITYNTLISACSQGSNLDDAVAVFEEMMASECRPDLWTYNAMVSVHGRC 183

Query: 479 GHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTY 538
           G  Q A ++F E+V +G  P+ VTYN ++   AK  +  +  ++  ++  AGF+ D +TY
Sbjct: 184 GKAQDAERMFRELVEKGFKPDAVTYNSLLYAFAKEGDADTVERVCEELVRAGFKKDGITY 243

Query: 539 SIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQ 598
           + ++ + G  G LD A  ++ EMR     PD   Y +L+D  GK   +  A +  E M  
Sbjct: 244 NTMIHMYGKMGRLDLALGLYDEMRALGCTPDAVTYTVLIDSLGKMDRISDAGKVLEEMAD 303

Query: 599 AGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYD 658
           AGL+P + T ++L+ A+ + G+  +A      M+  G+KP    Y ++L     ARS   
Sbjct: 304 AGLKPTLVTFSALICAYAKGGRREEAVRTFSHMVASGVKPDRLAYLVMLDII--ARS--- 358

Query: 659 MGFCHELMAV 668
            G   +LMA+
Sbjct: 359 -GDMRKLMAL 367



 Score =  143 bits (360), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 84/300 (28%), Positives = 149/300 (49%), Gaps = 1/300 (0%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           RQ G + D  TY T++    +         + ++M+   C+P++ TYN ++  +GR    
Sbjct: 127 RQVGLRPDVITYNTLISACSQGSNLDDAVAVFEEMMASECRPDLWTYNAMVSVHGRCGKA 186

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
            +A  +F+++   G +PD VTY +L+   AK G  D    + +++  AG   D  TY+ +
Sbjct: 187 QDAERMFRELVEKGFKPDAVTYNSLLYAFAKEGDADTVERVCEELVRAGFKKDGITYNTM 246

Query: 472 INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF 531
           I+  GK G L  A  L+ EM   GC P+ VTY ++I    K      A K+  +M +AG 
Sbjct: 247 IHMYGKMGRLDLALGLYDEMRALGCTPDAVTYTVLIDSLGKMDRISDAGKVLEEMADAGL 306

Query: 532 EPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWE 591
           +P  VT+S ++      G  +EA   F+ M      PD   Y +++D+  ++G++RK   
Sbjct: 307 KPTLVTFSALICAYAKGGRREEAVRTFSHMVASGVKPDRLAYLVMLDIIARSGDMRKLMA 366

Query: 592 WYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGM-LNLGLKPSLQTYTLLLSCC 650
            Y+ M+  G RP+      +L+A  +  +  +   ++Q M +   + P L +  L+ + C
Sbjct: 367 LYQTMMNDGYRPDNALYQVMLAALAKGNEYDEIEAVVQDMEVVCQMNPQLVSSILIKAEC 426



 Score =  139 bits (351), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 79/263 (30%), Positives = 139/263 (52%), Gaps = 4/263 (1%)

Query: 394 NVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFL--DVAMD 451
            V  +N ++  Y R+   ++   +   M+    EPD V++ TLI+  AK+G L    A D
Sbjct: 62  TVQVFNAMMGVYARSGRFDDVRQLLDAMRGQELEPDLVSFNTLINARAKSGCLAPGSAFD 121

Query: 452 MYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQA 511
           +  +++  GL PD  TY+ +I+   +  +L  A  +F EM+   C P+L TYN M+++  
Sbjct: 122 LLLEVRQVGLRPDVITYNTLISACSQGSNLDDAVAVFEEMMASECRPDLWTYNAMVSVHG 181

Query: 512 KARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEP 571
           +    Q A +++R++   GF+PD VTY+ ++      G  D  E V  E+ R  +  D  
Sbjct: 182 RCGKAQDAERMFRELVEKGFKPDAVTYNSLLYAFAKEGDADTVERVCEELVRAGFKKDGI 241

Query: 572 VYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGM 631
            Y  ++ ++GK G +  A   Y+ M   G  P+  T   L+ +  ++ ++SDA  +L+ M
Sbjct: 242 TYNTMIHMYGKMGRLDLALGLYDEMRALGCTPDAVTYTVLIDSLGKMDRISDAGKVLEEM 301

Query: 632 LNLGLKPSLQTYTLLLSCCTEAR 654
            + GLKP+L T++ L+  C  A+
Sbjct: 302 ADAGLKPTLVTFSALI--CAYAK 322



 Score =  136 bits (343), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 79/282 (28%), Positives = 139/282 (49%), Gaps = 1/282 (0%)

Query: 377 GAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTL 436
           G+   LL ++ + G +P+V+TYN LI +  + + L++A+ VF++M    C PD  TY  +
Sbjct: 117 GSAFDLLLEVRQVGLRPDVITYNTLISACSQGSNLDDAVAVFEEMMASECRPDLWTYNAM 176

Query: 437 IDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGC 496
           + +H + G    A  M++++   G  PD  TY+ ++    K G      ++  E+V  G 
Sbjct: 177 VSVHGRCGKAQDAERMFRELVEKGFKPDAVTYNSLLYAFAKEGDADTVERVCEELVRAGF 236

Query: 497 IPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEA 556
             + +TYN MI +  K      AL LY +M+  G  PD VTY+++++ LG    + +A  
Sbjct: 237 KKDGITYNTMIHMYGKMGRLDLALGLYDEMRALGCTPDAVTYTVLIDSLGKMDRISDAGK 296

Query: 557 VFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFL 616
           V  EM      P    +  L+  + K G   +A   +  M+ +G++P+      +L    
Sbjct: 297 VLEEMADAGLKPTLVTFSALICAYAKGGRREEAVRTFSHMVASGVKPDRLAYLVMLDIIA 356

Query: 617 RVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYD 658
           R G +     L Q M+N G +P    Y ++L+   +  + YD
Sbjct: 357 RSGDMRKLMALYQTMMNDGYRPDNALYQVMLAALAKG-NEYD 397



 Score =  124 bits (311), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 112/495 (22%), Positives = 212/495 (42%), Gaps = 10/495 (2%)

Query: 355  GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
            GFK  + T   M+    +A     + K+ + M   G  PN+  Y  +I    R     + 
Sbjct: 689  GFKISKSTVILMLDAFTKAGDIFEVMKIYNGMKEAGYLPNMHIYRSMISLLCRNKRYRDV 748

Query: 415  LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
              +  +M+  G EPD     TL+ ++   G  D  +++Y  +  AGL P+  TY+ +I  
Sbjct: 749  ELMVVEMERAGFEPDLTILNTLLLMYTGNGNFDKTVEVYHSILEAGLEPNEDTYNTLIVM 808

Query: 475  LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPD 534
              +    +    L  EM  +G  P L +Y  ++A   KA+ ++ A +L+ ++++ G+  +
Sbjct: 809  YSRNLRPEEGFTLLNEMGKKGLTPKLESYKSLLAASGKAKLWEQAEQLFEEIRSKGYRLN 868

Query: 535  KVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYE 594
            +  Y ++M++        +AE + A M+     P      +L+  +G AG+  +A +   
Sbjct: 869  RSLYHMLMKIYRDACNHSKAEQLLASMKEDGIEPTIATMHILMTSYGTAGHPDEAEKVLN 928

Query: 595  AMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEAR 654
            ++  + L  +    +++ +A+L+ G  +     L  M   G+KP  Q +T  +   +   
Sbjct: 929  SLKSSSLEVSTLPYSTVFNAYLKNGDYNLGITKLLEMKADGVKPDHQVWTCFIRAASLCE 988

Query: 655  SPYDMGFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRESKRGLVD 714
               D      ++ ++      F L +        ++   V +FLE + + +  +    V+
Sbjct: 989  RTAD-----AILLLNSLRDCEFDLPIRLLTERTSSLLTEVSNFLEELDALEDSAALNFVN 1043

Query: 715  AVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAVKEKGMSYWLINLHVMSDGTAVIALSRTL 774
            A+ D L     +  A  V+++A  K++Y   V       W  +   +S G A+ AL+  L
Sbjct: 1044 ALEDLLWAFECRATASYVFQLAVDKSIYRHNVFRVVEKDWGADFRKLSAGAALTALTLWL 1103

Query: 775  AWFRKQMLI-SGVGPSRIDIVTGWGRRSRVTGTSLVRQAVQELLHMFSFPFFTENGNSGC 833
               +   L  S   P  I +VTG G  + V+    +R+ ++  L     PF      SG 
Sbjct: 1104 DQMQDASLQGSPESPKSIVLVTGEGEYNMVS----LRKTIRAYLLEMGSPFLPCKTRSGR 1159

Query: 834  FVGCGEPLNKWLLQS 848
            FV     L  WL  S
Sbjct: 1160 FVAKSYSLKMWLKDS 1174



 Score =  112 bits (279), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 105/445 (23%), Positives = 188/445 (42%), Gaps = 48/445 (10%)

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
           +AGFK D  TY TM+ + G+  +      L D+M   GC P+ VTY  LI S G+ + ++
Sbjct: 233 RAGFKKDGITYNTMIHMYGKMGRLDLALGLYDEMRALGCTPDAVTYTVLIDSLGKMDRIS 292

Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
           +A  V ++M   G +P  VT+  LI  +AK G  + A+  +  M A+G+ PD   Y V++
Sbjct: 293 DAGKVLEEMADAGLKPTLVTFSALICAYAKGGRREEAVRTFSHMVASGVKPDRLAYLVML 352

Query: 473 NCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNA--- 529
           + + ++G ++    L+  M+N G  P+   Y +M+A  AK   Y     + +DM+     
Sbjct: 353 DIIARSGDMRKLMALYQTMMNDGYRPDNALYQVMLAALAKGNEYDEIEAVVQDMEVVCQM 412

Query: 530 ----------------------------GFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEM 561
                                       G EPD  +   +++     G  +E  ++   +
Sbjct: 413 NPQLVSSILIKAECISQGAKLLKKACLQGHEPDSKSLLSILDAYETTGKHEEGLSLLQFI 472

Query: 562 RRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCN---SLLSAFLRV 618
           R         +    + L  K   +  A + Y +M           CN    L++     
Sbjct: 473 REHVPSSCNLISECSIMLLCKNQKIAAAMQEYSSMQMLKCGSFGQDCNLYEYLITCLEEA 532

Query: 619 GQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGF---CHELM--AVSGHPA 673
               +A  +   M  +G++PS + Y  ++S   +      +GF    H+LM  AV    +
Sbjct: 533 EFFPEASQVFSDMQFIGIEPSRKIYESMISAYCK------LGFPETAHQLMDEAVQSGIS 586

Query: 674 HMFLLSMPSPGPDGQNVR--DHVGSFLEMMHSEDRESKRGLVDAVVDFLHKSGLKEEAGS 731
              L S  +       ++   H  +F++ +  E    +R + +A++    +SGL E A +
Sbjct: 587 LNILSSRVTMIEAYGKIKLWQHAENFVKGLKQEPSIDRR-IWNALIHAYAESGLYEHARA 645

Query: 732 VWEVAAQKNVYPDAVKEKGMSYWLI 756
           V+++  +K   P      GM   LI
Sbjct: 646 VFDIMIEKGPLPTIDSVNGMMRALI 670



 Score =  111 bits (277), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 77/316 (24%), Positives = 149/316 (47%), Gaps = 4/316 (1%)

Query: 432 TYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQ--AAHQLFC 489
            +  ++ ++A++G  D    +   M+   L PD  +++ +IN   K+G L   +A  L  
Sbjct: 65  VFNAMMGVYARSGRFDDVRQLLDAMRGQELEPDLVSFNTLINARAKSGCLAPGSAFDLLL 124

Query: 490 EMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCG 549
           E+   G  P+++TYN +I+  ++  N   A+ ++ +M  +   PD  TY+ ++ V G CG
Sbjct: 125 EVRQVGLRPDVITYNTLISACSQGSNLDDAVAVFEEMMASECRPDLWTYNAMVSVHGRCG 184

Query: 550 YLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCN 609
              +AE +F E+  K + PD   Y  L+  + K G+        E +++AG + +  T N
Sbjct: 185 KAQDAERMFRELVEKGFKPDAVTYNSLLYAFAKEGDADTVERVCEELVRAGFKKDGITYN 244

Query: 610 SLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGFCHELMAVS 669
           +++  + ++G+L  A  L   M  LG  P   TYT+L+    +     D G   E MA +
Sbjct: 245 TMIHMYGKMGRLDLALGLYDEMRALGCTPDAVTYTVLIDSLGKMDRISDAGKVLEEMADA 304

Query: 670 G-HPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRESKRGLVDAVVDFLHKSGLKEE 728
           G  P  +   ++      G    + V +F  M+ S  +  +   +  ++D + +SG   +
Sbjct: 305 GLKPTLVTFSALICAYAKGGRREEAVRTFSHMVASGVKPDRLAYL-VMLDIIARSGDMRK 363

Query: 729 AGSVWEVAAQKNVYPD 744
             ++++        PD
Sbjct: 364 LMALYQTMMNDGYRPD 379



 Score = 79.3 bits (194), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 78/394 (19%), Positives = 151/394 (38%), Gaps = 71/394 (18%)

Query: 354 AGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNE 413
           +G K D   Y  M+ I+ R+     +  L   M+ DG +P+   Y  ++ +  + N  +E
Sbjct: 339 SGVKPDRLAYLVMLDIIARSGDMRKLMALYQTMMNDGYRPDNALYQVMLAALAKGNEYDE 398

Query: 414 ALDVFKQMQVV-------------------------------GCEPDRVTYCTLIDIHAK 442
              V + M+VV                               G EPD  +  +++D +  
Sbjct: 399 IEAVVQDMEVVCQMNPQLVSSILIKAECISQGAKLLKKACLQGHEPDSKSLLSILDAYET 458

Query: 443 AGF-----------------------------------LDVAMDMYKKMQ---AAGLSPD 464
            G                                    +  AM  Y  MQ         D
Sbjct: 459 TGKHEEGLSLLQFIREHVPSSCNLISECSIMLLCKNQKIAAAMQEYSSMQMLKCGSFGQD 518

Query: 465 TFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYR 524
              Y  +I CL +A     A Q+F +M   G  P+   Y  MI+   K    ++A +L  
Sbjct: 519 CNLYEYLITCLEEAEFFPEASQVFSDMQFIGIEPSRKIYESMISAYCKLGFPETAHQLMD 578

Query: 525 DMQNAGFEPDKVTYSIVM-EVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKA 583
           +   +G   + ++  + M E  G       AE     ++++  + D  ++  L+  + ++
Sbjct: 579 EAVQSGISLNILSSRVTMIEAYGKIKLWQHAENFVKGLKQEPSI-DRRIWNALIHAYAES 637

Query: 584 GNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTY 643
           G    A   ++ M++ G  P + + N ++ A +  G+L + Y ++Q + ++G K S  T 
Sbjct: 638 GLYEHARAVFDIMIEKGPLPTIDSVNGMMRALIIDGRLDELYVIVQELQDMGFKISKSTV 697

Query: 644 TLLLSCCTEARSPYDMGFCHELMAVSGHPAHMFL 677
            L+L   T+A   +++   +  M  +G+  +M +
Sbjct: 698 ILMLDAFTKAGDIFEVMKIYNGMKEAGYLPNMHI 731


>gi|255561943|ref|XP_002521980.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223538784|gb|EEF40384.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 584

 Score =  164 bits (414), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 118/424 (27%), Positives = 203/424 (47%), Gaps = 35/424 (8%)

Query: 242 KAHSNRLNSNFKSNLQP--SDA-KVVECVSERFSKPSREMKIPAGLAPFSRHFASTGNVV 298
           K  SN L+S   S ++P  +DA KV      R S  +R+  +       S  F    +++
Sbjct: 21  KPTSNSLHSTIVSCIRPELNDANKVRNPQKVRVSAETRQTHV------LSFDFKEV-HLM 73

Query: 299 ESVSRILRQWKWGP--LAEEALGNTNYSMDAYQANQVLKQLQDHTVALGFFN-------- 348
           + ++R  R  K+       E + +  Y+ D     +++K         GFFN        
Sbjct: 74  KLLNRSCRAGKYNESLYFLECMVDKGYTPDVILCTKLIK---------GFFNSRNIGKAT 124

Query: 349 ----WLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHS 404
                L R    K D   Y  ++    +A Q    N++LD+M   G  P+VVTYN +I S
Sbjct: 125 RVMEILERYG--KPDVFAYNALISGFIKANQLENANRVLDRMKSRGFLPDVVTYNIMIGS 182

Query: 405 YGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPD 464
           +     L+ AL++F+++    CEP  +TY  LI+     G +DVAM +  +M + GL PD
Sbjct: 183 FCSRGKLDLALEIFEELLKDNCEPTVITYTILIEATILDGGIDVAMKLLDEMLSKGLEPD 242

Query: 465 TFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYR 524
           T TY+ II  + K   +  A +L   + ++GC P+++TYNI++        +    KL  
Sbjct: 243 TLTYNAIIRGMCKEMMVDKAFELLRSLSSRGCKPDIITYNILLRTLLSRGKWSEGEKLIS 302

Query: 525 DMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAG 584
           +M + G +P+ VT+SI++  L   G ++EA  +   M+ K   PD   Y  L+  + + G
Sbjct: 303 EMISIGCKPNVVTHSILIGTLCRDGKVEEAVNLLRSMKEKGLKPDAYCYDPLIAGFCREG 362

Query: 585 NVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYT 644
            +  A E+ E M+  G  P++   N++++   R G+   A  + + +  +G  P++ +Y 
Sbjct: 363 RLDLATEFLEYMISDGCLPDIVNYNTIMAGLCRTGKADQALEVFEKLDEVGCPPNVSSYN 422

Query: 645 LLLS 648
            L S
Sbjct: 423 TLFS 426



 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 84/298 (28%), Positives = 143/298 (47%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           +  GF  D  TY  M+G      +     ++ +++++D C+P V+TY  LI +      +
Sbjct: 165 KSRGFLPDVVTYNIMIGSFCSRGKLDLALEIFEELLKDNCEPTVITYTILIEATILDGGI 224

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
           + A+ +  +M   G EPD +TY  +I    K   +D A ++ + + + G  PD  TY+++
Sbjct: 225 DVAMKLLDEMLSKGLEPDTLTYNAIIRGMCKEMMVDKAFELLRSLSSRGCKPDIITYNIL 284

Query: 472 INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF 531
           +  L   G      +L  EM++ GC PN+VT++I+I    +    + A+ L R M+  G 
Sbjct: 285 LRTLLSRGKWSEGEKLISEMISIGCKPNVVTHSILIGTLCRDGKVEEAVNLLRSMKEKGL 344

Query: 532 EPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWE 591
           +PD   Y  ++      G LD A      M     +PD   Y  ++    + G   +A E
Sbjct: 345 KPDAYCYDPLIAGFCREGRLDLATEFLEYMISDGCLPDIVNYNTIMAGLCRTGKADQALE 404

Query: 592 WYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSC 649
            +E + + G  PNV + N+L SA    G    A  ++  +LN G+ P   TY  L+SC
Sbjct: 405 VFEKLDEVGCPPNVSSYNTLFSALWSSGDRYRALEMILKLLNQGIDPDEITYNSLISC 462



 Score =  135 bits (341), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 77/293 (26%), Positives = 141/293 (48%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           G + D  TY  ++  + +        +LL  +   GC+P+++TYN L+ +       +E 
Sbjct: 238 GLEPDTLTYNAIIRGMCKEMMVDKAFELLRSLSSRGCKPDIITYNILLRTLLSRGKWSEG 297

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
             +  +M  +GC+P+ VT+  LI    + G ++ A+++ + M+  GL PD + Y  +I  
Sbjct: 298 EKLISEMISIGCKPNVVTHSILIGTLCRDGKVEEAVNLLRSMKEKGLKPDAYCYDPLIAG 357

Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPD 534
             + G L  A +    M++ GC+P++V YN ++A   +      AL+++  +   G  P+
Sbjct: 358 FCREGRLDLATEFLEYMISDGCLPDIVNYNTIMAGLCRTGKADQALEVFEKLDEVGCPPN 417

Query: 535 KVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYE 594
             +Y+ +   L   G    A  +  ++  +   PDE  Y  L+    + G V +A E   
Sbjct: 418 VSSYNTLFSALWSSGDRYRALEMILKLLNQGIDPDEITYNSLISCLCRDGMVDEAIELLV 477

Query: 595 AMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
            M     RPNV + N +L    +V + +DA  +L  M   G +P+  TY LL+
Sbjct: 478 DMQSGRYRPNVVSYNIILLGLCKVNRANDAIEVLAAMTEKGCQPNETTYILLI 530



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 85/311 (27%), Positives = 150/311 (48%), Gaps = 5/311 (1%)

Query: 326 DAYQANQVLKQLQDHTVALGFFNWLRRQA--GFKHDEHTYTTMVGILGRARQFGAINKLL 383
           D    N +++ +    +    F  LR  +  G K D  TY  ++  L    ++    KL+
Sbjct: 242 DTLTYNAIIRGMCKEMMVDKAFELLRSLSSRGCKPDIITYNILLRTLLSRGKWSEGEKLI 301

Query: 384 DQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKA 443
            +M+  GC+PNVVT++ LI +  R   + EA+++ + M+  G +PD   Y  LI    + 
Sbjct: 302 SEMISIGCKPNVVTHSILIGTLCRDGKVEEAVNLLRSMKEKGLKPDAYCYDPLIAGFCRE 361

Query: 444 GFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTY 503
           G LD+A +  + M + G  PD   Y+ I+  L + G    A ++F ++   GC PN+ +Y
Sbjct: 362 GRLDLATEFLEYMISDGCLPDIVNYNTIMAGLCRTGKADQALEVFEKLDEVGCPPNVSSY 421

Query: 504 NIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRR 563
           N + +    + +   AL++   + N G +PD++TY+ ++  L   G +DEA  +  +M+ 
Sbjct: 422 NTLFSALWSSGDRYRALEMILKLLNQGIDPDEITYNSLISCLCRDGMVDEAIELLVDMQS 481

Query: 564 KNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSD 623
             + P+   Y +++    K      A E   AM + G +PN  T   L+      G  ++
Sbjct: 482 GRYRPNVVSYNIILLGLCKVNRANDAIEVLAAMTEKGCQPNETTYILLIEGIGFSGLRAE 541

Query: 624 AYHL---LQGM 631
           A  L   L GM
Sbjct: 542 AMELANSLHGM 552



 Score =  117 bits (293), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 64/225 (28%), Positives = 117/225 (52%), Gaps = 2/225 (0%)

Query: 348 NWLR--RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSY 405
           N LR  ++ G K D + Y  ++    R  +     + L+ M+ DGC P++V YN ++   
Sbjct: 334 NLLRSMKEKGLKPDAYCYDPLIAGFCREGRLDLATEFLEYMISDGCLPDIVNYNTIMAGL 393

Query: 406 GRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDT 465
            R    ++AL+VF+++  VGC P+  +Y TL      +G    A++M  K+   G+ PD 
Sbjct: 394 CRTGKADQALEVFEKLDEVGCPPNVSSYNTLFSALWSSGDRYRALEMILKLLNQGIDPDE 453

Query: 466 FTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRD 525
            TY+ +I+CL + G +  A +L  +M +    PN+V+YNI++    K      A+++   
Sbjct: 454 ITYNSLISCLCRDGMVDEAIELLVDMQSGRYRPNVVSYNIILLGLCKVNRANDAIEVLAA 513

Query: 526 MQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDE 570
           M   G +P++ TY +++E +G  G   EA  +   +   N + ++
Sbjct: 514 MTEKGCQPNETTYILLIEGIGFSGLRAEAMELANSLHGMNAISED 558


>gi|357151724|ref|XP_003575883.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
           chloroplastic-like [Brachypodium distachyon]
          Length = 757

 Score =  163 bits (413), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 98/300 (32%), Positives = 159/300 (53%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           GF+ D  T++T V  L +        K+L  M+++GC+P+V TY+ +I+       L EA
Sbjct: 296 GFEPDRVTFSTFVNGLCQNGHVDHALKVLGLMLQEGCEPDVYTYSTVINCLCNNGELEEA 355

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
             +  QM   GC PD  T+ TLI        L+ A+D+ +++   GLSP+ +T++++IN 
Sbjct: 356 KGIVNQMVDSGCLPDTTTFNTLIVALCTENQLEEALDLARELTVKGLSPNVYTFNILINA 415

Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPD 534
           L K G    A +LF EM + GC P+ VTYNI+I     +     AL L ++M+ +G    
Sbjct: 416 LCKVGDPHLAVRLFEEMKSSGCTPDEVTYNILIDNLCSSGKLAKALDLLKEMEVSGCPQS 475

Query: 535 KVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYE 594
            VTY+ +++ L     ++EAE VF +M       +   +  L+D    A  +  A E  +
Sbjct: 476 TVTYNTIIDGLCKRRRIEEAEEVFDQMDVTGIGRNAITFNTLIDGLCNAERIDDAAELVD 535

Query: 595 AMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEAR 654
            M+  GL+PN  T NS+L+ + + G +S A  +LQ M   G +  + TY  L++   +AR
Sbjct: 536 QMISEGLQPNNVTYNSILTHYCKQGNISKAADILQTMTANGFEVDVVTYATLINGLCKAR 595



 Score =  150 bits (379), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 90/324 (27%), Positives = 165/324 (50%), Gaps = 1/324 (0%)

Query: 350 LRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRAN 409
           L  Q G + D +TY+T++  L    +      +++QMV  GC P+  T+N LI +    N
Sbjct: 326 LMLQEGCEPDVYTYSTVINCLCNNGELEEAKGIVNQMVDSGCLPDTTTFNTLIVALCTEN 385

Query: 410 YLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYS 469
            L EALD+ +++ V G  P+  T+  LI+   K G   +A+ ++++M+++G +PD  TY+
Sbjct: 386 QLEEALDLARELTVKGLSPNVYTFNILINALCKVGDPHLAVRLFEEMKSSGCTPDEVTYN 445

Query: 470 VIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNA 529
           ++I+ L  +G L  A  L  EM   GC  + VTYN +I    K R  + A +++  M   
Sbjct: 446 ILIDNLCSSGKLAKALDLLKEMEVSGCPQSTVTYNTIIDGLCKRRRIEEAEEVFDQMDVT 505

Query: 530 GFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKA 589
           G   + +T++ +++ L +   +D+A  +  +M  +   P+   Y  ++  + K GN+ KA
Sbjct: 506 GIGRNAITFNTLIDGLCNAERIDDAAELVDQMISEGLQPNNVTYNSILTHYCKQGNISKA 565

Query: 590 WEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSC 649
            +  + M   G   +V T  +L++   +  +   A  LL+GM   G+KP+ + Y  ++  
Sbjct: 566 ADILQTMTANGFEVDVVTYATLINGLCKARRTQAALKLLRGMRMKGMKPTPKAYNPVIQS 625

Query: 650 CTEARSPYD-MGFCHELMAVSGHP 672
                +  D +    E+  V G P
Sbjct: 626 LFRGNNGRDALSLFREMTEVGGPP 649



 Score =  149 bits (375), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 93/325 (28%), Positives = 148/325 (45%), Gaps = 35/325 (10%)

Query: 359 DEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVF 418
           DE T+TT++          A  +L  +M   GC P  VT N LI+ Y +   + +AL   
Sbjct: 230 DETTFTTLMEGFVEEGSIEAALRLKARMSEMGCSPTSVTVNVLINGYCKLGRVGDALGYI 289

Query: 419 KQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKA 478
           +Q    G EPDRVT+ T ++   + G +D A+ +   M   G  PD +TYS +INCL   
Sbjct: 290 QQEIADGFEPDRVTFSTFVNGLCQNGHVDHALKVLGLMLQEGCEPDVYTYSTVINCLCNN 349

Query: 479 GHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTY 538
           G L+ A  +  +MV+ GC+P+  T+N +I         + AL L R++   G  P+  T+
Sbjct: 350 GELEEAKGIVNQMVDSGCLPDTTTFNTLIVALCTENQLEEALDLARELTVKGLSPNVYTF 409

Query: 539 SIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAW-------- 590
           +I++  L   G    A  +F EM+     PDE  Y +L+D    +G + KA         
Sbjct: 410 NILINALCKVGDPHLAVRLFEEMKSSGCTPDEVTYNILIDNLCSSGKLAKALDLLKEMEV 469

Query: 591 ---------------------------EWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSD 623
                                      E ++ M   G+  N  T N+L+       ++ D
Sbjct: 470 SGCPQSTVTYNTIIDGLCKRRRIEEAEEVFDQMDVTGIGRNAITFNTLIDGLCNAERIDD 529

Query: 624 AYHLLQGMLNLGLKPSLQTYTLLLS 648
           A  L+  M++ GL+P+  TY  +L+
Sbjct: 530 AAELVDQMISEGLQPNNVTYNSILT 554



 Score =  129 bits (323), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 85/319 (26%), Positives = 148/319 (46%), Gaps = 2/319 (0%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           G + +   Y  ++ +L    +   +     +M   G +P+VVT+N +I +  RA     A
Sbjct: 156 GVQANTEVYNHLLTVLAEGSKIKLLESAYTEMSSQGIEPDVVTFNTVIDALCRARQARTA 215

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
           + + ++M      PD  T+ TL++   + G ++ A+ +  +M   G SP + T +V+IN 
Sbjct: 216 VLMLEEMSSCDVAPDETTFTTLMEGFVEEGSIEAALRLKARMSEMGCSPTSVTVNVLING 275

Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPD 534
             K G +  A     + +  G  P+ VT++  +    +  +   ALK+   M   G EPD
Sbjct: 276 YCKLGRVGDALGYIQQEIADGFEPDRVTFSTFVNGLCQNGHVDHALKVLGLMLQEGCEPD 335

Query: 535 KVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYE 594
             TYS V+  L + G L+EA+ +  +M     +PD   +  L+        + +A +   
Sbjct: 336 VYTYSTVINCLCNNGELEEAKGIVNQMVDSGCLPDTTTFNTLIVALCTENQLEEALDLAR 395

Query: 595 AMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL-SCCTEA 653
            +   GL PNV T N L++A  +VG    A  L + M + G  P   TY +L+ + C+  
Sbjct: 396 ELTVKGLSPNVYTFNILINALCKVGDPHLAVRLFEEMKSSGCTPDEVTYNILIDNLCSSG 455

Query: 654 RSPYDMGFCHELMAVSGHP 672
           +    +    E M VSG P
Sbjct: 456 KLAKALDLLKE-MEVSGCP 473



 Score =  126 bits (317), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 119/525 (22%), Positives = 211/525 (40%), Gaps = 60/525 (11%)

Query: 334 LKQLQDHTVALGFFN-WLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQ 392
           L++  D   AL   N  L R  G       Y  ++  LG A  F  +  L+ +M R+G +
Sbjct: 63  LREQADPEAALRMLNSALARDDGLTPSRDVYEEIIRKLGTAGAFDLMKVLVGEMRREGHE 122

Query: 393 PNVVTYNRLIHSYGRANYLNEALDV----------------------------------- 417
             +      I SY R    ++A D+                                   
Sbjct: 123 VGLGLVQSFIGSYARLQLFDDAFDLVSNQLDMFGVQANTEVYNHLLTVLAEGSKIKLLES 182

Query: 418 -FKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLG 476
            + +M   G EPD VT+ T+ID   +A     A+ M ++M +  ++PD  T++ ++    
Sbjct: 183 AYTEMSSQGIEPDVVTFNTVIDALCRARQARTAVLMLEEMSSCDVAPDETTFTTLMEGFV 242

Query: 477 KAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKV 536
           + G ++AA +L   M   GC P  VT N++I    K      AL   +     GFEPD+V
Sbjct: 243 EEGSIEAALRLKARMSEMGCSPTSVTVNVLINGYCKLGRVGDALGYIQQEIADGFEPDRV 302

Query: 537 TYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAM 596
           T+S  +  L   G++D A  V   M ++   PD   Y  +++     G + +A      M
Sbjct: 303 TFSTFVNGLCQNGHVDHALKVLGLMLQEGCEPDVYTYSTVINCLCNNGELEEAKGIVNQM 362

Query: 597 LQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSP 656
           + +G  P+  T N+L+ A     QL +A  L + +   GL P++ T+ +L++   +   P
Sbjct: 363 VDSGCLPDTTTFNTLIVALCTENQLEEALDLARELTVKGLSPNVYTFNILINALCKVGDP 422

Query: 657 YDMGFCHELMAVSGHPA-----HMFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRESKRG 711
           +      E M  SG        ++ + ++ S G   + +       L+ M          
Sbjct: 423 HLAVRLFEEMKSSGCTPDEVTYNILIDNLCSSGKLAKAL-----DLLKEMEVSGCPQSTV 477

Query: 712 LVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAVKEKGMSYWLINLHVMSDGTAVIALS 771
             + ++D L K    EEA  V+          D +   G+    I  + + DG       
Sbjct: 478 TYNTIIDGLCKRRRIEEAEEVF----------DQMDVTGIGRNAITFNTLIDGLCNAERI 527

Query: 772 RTLAWFRKQMLISGVGPSRI---DIVTGWGRRSRVTGTSLVRQAV 813
              A    QM+  G+ P+ +    I+T + ++  ++  + + Q +
Sbjct: 528 DDAAELVDQMISEGLQPNNVTYNSILTHYCKQGNISKAADILQTM 572



 Score =  122 bits (306), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 93/392 (23%), Positives = 168/392 (42%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           G + D  T+ T++  L RARQ      +L++M      P+  T+  L+  +     +  A
Sbjct: 191 GIEPDVVTFNTVIDALCRARQARTAVLMLEEMSSCDVAPDETTFTTLMEGFVEEGSIEAA 250

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
           L +  +M  +GC P  VT   LI+ + K G +  A+   ++  A G  PD  T+S  +N 
Sbjct: 251 LRLKARMSEMGCSPTSVTVNVLINGYCKLGRVGDALGYIQQEIADGFEPDRVTFSTFVNG 310

Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPD 534
           L + GH+  A ++   M+ +GC P++ TY+ +I         + A  +   M ++G  PD
Sbjct: 311 LCQNGHVDHALKVLGLMLQEGCEPDVYTYSTVINCLCNNGELEEAKGIVNQMVDSGCLPD 370

Query: 535 KVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYE 594
             T++ ++  L     L+EA  +  E+  K   P+   + +L++   K G+   A   +E
Sbjct: 371 TTTFNTLIVALCTENQLEEALDLARELTVKGLSPNVYTFNILINALCKVGDPHLAVRLFE 430

Query: 595 AMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEAR 654
            M  +G  P+  T N L+      G+L+ A  LL+ M   G   S  TY  ++    + R
Sbjct: 431 EMKSSGCTPDEVTYNILIDNLCSSGKLAKALDLLKEMEVSGCPQSTVTYNTIIDGLCKRR 490

Query: 655 SPYDMGFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRESKRGLVD 714
              +     + M V+G   +    +    G       D     ++ M SE  +      +
Sbjct: 491 RIEEAEEVFDQMDVTGIGRNAITFNTLIDGLCNAERIDDAAELVDQMISEGLQPNNVTYN 550

Query: 715 AVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAV 746
           +++    K G   +A  + +         D V
Sbjct: 551 SILTHYCKQGNISKAADILQTMTANGFEVDVV 582



 Score =  118 bits (296), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 88/308 (28%), Positives = 143/308 (46%), Gaps = 18/308 (5%)

Query: 334 LKQLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQP 393
           L ++ D  +A+  F  ++  +G   DE TY  ++  L  + +      LL +M   GC  
Sbjct: 416 LCKVGDPHLAVRLFEEMK-SSGCTPDEVTYNILIDNLCSSGKLAKALDLLKEMEVSGCPQ 474

Query: 394 NVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMY 453
           + VTYN +I    +   + EA +VF QM V G   + +T+ TLID    A  +D A ++ 
Sbjct: 475 STVTYNTIIDGLCKRRRIEEAEEVFDQMDVTGIGRNAITFNTLIDGLCNAERIDDAAELV 534

Query: 454 KKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKA 513
            +M + GL P+  TY+ I+    K G++  A  +   M   G   ++VTY  +I    KA
Sbjct: 535 DQMISEGLQPNNVTYNSILTHYCKQGNISKAADILQTMTANGFEVDVVTYATLINGLCKA 594

Query: 514 RNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVY 573
           R  Q+ALKL R M+  G +P    Y+ V++ L       +A ++F EM      PD   Y
Sbjct: 595 RRTQAALKLLRGMRMKGMKPTPKAYNPVIQSLFRGNNGRDALSLFREMTEVGGPPDAFTY 654

Query: 574 GLLV-DLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGML 632
            ++   L    G +++A+++   M   G  P                + S    L +G+L
Sbjct: 655 KIVFRGLCRGGGPIKEAFDFLVEMADNGFIP----------------EFSSFRMLAEGLL 698

Query: 633 NLGLKPSL 640
           NLG+   L
Sbjct: 699 NLGMDDYL 706


>gi|224092332|ref|XP_002309562.1| predicted protein [Populus trichocarpa]
 gi|222855538|gb|EEE93085.1| predicted protein [Populus trichocarpa]
          Length = 590

 Score =  163 bits (413), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 106/347 (30%), Positives = 162/347 (46%), Gaps = 37/347 (10%)

Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLI 402
           A+ FF+     +G +   +TYTT++  L +  +  A   L  +M   GCQPNVVTYN LI
Sbjct: 184 AVEFFDDFE-ASGCQPTVYTYTTIINGLCKIGETTAAAGLFKKMEEAGCQPNVVTYNILI 242

Query: 403 HSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLI------------------------- 437
            S  +   +NEALD+F  M+     PD  TY +LI                         
Sbjct: 243 DSLCKDKLVNEALDIFSYMKAKRISPDIFTYNSLIQGLCNFRRWKEASALLNEMTSLNIM 302

Query: 438 ----------DIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQL 487
                     D   K G +  A  ++K M   G+ PD  TYS ++        +  A +L
Sbjct: 303 PNIFTFNVLVDAICKEGKVSEAQGVFKTMTEMGVEPDVVTYSSLMYGYSLRMEIVEARKL 362

Query: 488 FCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGH 547
           F  M+ +GC P+  +YNI+I    KA+    A +L+ +M + G  PD V Y+ ++  L  
Sbjct: 363 FDAMITKGCKPDAFSYNILIKGYCKAKRIDEAKQLFNEMIHQGLTPDNVNYNTLIHGLCQ 422

Query: 548 CGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPT 607
            G L EA+ +F  M     +PD   Y +L+D + K G + KA+  +  M    L+P++  
Sbjct: 423 LGRLREAQDLFKNMHSNGNLPDLFTYSMLLDGFCKEGYLGKAFRLFRVMQSTYLKPDIAM 482

Query: 608 CNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL-SCCTEA 653
            N L+ A  + G L DA  L   +   GL P++Q YT ++ + C E 
Sbjct: 483 YNILIDAMCKFGNLKDARKLFSELFVQGLLPNVQIYTTIINNLCKEG 529



 Score =  151 bits (382), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 100/324 (30%), Positives = 160/324 (49%), Gaps = 9/324 (2%)

Query: 340 HTVALGFFNWLRRQAGFKHDEH--------TYTTMV-GILGRARQFGAINKLLDQMVRDG 390
           H  A  F N     A F H  H         +T ++  I+   + +GA+  L  QM   G
Sbjct: 66  HDDASSFRNIDDALASFNHMLHREPLPCIIQFTKLLSAIVKMGQYYGAVISLSKQMELAG 125

Query: 391 CQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAM 450
             P++ T + LI  +     ++ A  VF +M  +G +PD VT+ TLI+   K G    A+
Sbjct: 126 LSPDIYTLSILIDCFSHLQRVDLAFSVFSKMIKLGLQPDAVTFNTLINGLCKVGKFAQAV 185

Query: 451 DMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQ 510
           + +   +A+G  P  +TY+ IIN L K G   AA  LF +M   GC PN+VTYNI+I   
Sbjct: 186 EFFDDFEASGCQPTVYTYTTIINGLCKIGETTAAAGLFKKMEEAGCQPNVVTYNILIDSL 245

Query: 511 AKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDE 570
            K +    AL ++  M+     PD  TY+ +++ L +     EA A+  EM   N +P+ 
Sbjct: 246 CKDKLVNEALDIFSYMKAKRISPDIFTYNSLIQGLCNFRRWKEASALLNEMTSLNIMPNI 305

Query: 571 PVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQG 630
             + +LVD   K G V +A   ++ M + G+ P+V T +SL+  +    ++ +A  L   
Sbjct: 306 FTFNVLVDAICKEGKVSEAQGVFKTMTEMGVEPDVVTYSSLMYGYSLRMEIVEARKLFDA 365

Query: 631 MLNLGLKPSLQTYTLLLSCCTEAR 654
           M+  G KP   +Y +L+    +A+
Sbjct: 366 MITKGCKPDAFSYNILIKGYCKAK 389



 Score =  149 bits (377), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 89/305 (29%), Positives = 158/305 (51%), Gaps = 1/305 (0%)

Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLI 402
           AL  F++++ +     D  TY +++  L   R++   + LL++M      PN+ T+N L+
Sbjct: 254 ALDIFSYMKAKR-ISPDIFTYNSLIQGLCNFRRWKEASALLNEMTSLNIMPNIFTFNVLV 312

Query: 403 HSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLS 462
            +  +   ++EA  VFK M  +G EPD VTY +L+  ++    +  A  ++  M   G  
Sbjct: 313 DAICKEGKVSEAQGVFKTMTEMGVEPDVVTYSSLMYGYSLRMEIVEARKLFDAMITKGCK 372

Query: 463 PDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKL 522
           PD F+Y+++I    KA  +  A QLF EM++QG  P+ V YN +I    +    + A  L
Sbjct: 373 PDAFSYNILIKGYCKAKRIDEAKQLFNEMIHQGLTPDNVNYNTLIHGLCQLGRLREAQDL 432

Query: 523 YRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGK 582
           +++M + G  PD  TYS++++     GYL +A  +F  M+     PD  +Y +L+D   K
Sbjct: 433 FKNMHSNGNLPDLFTYSMLLDGFCKEGYLGKAFRLFRVMQSTYLKPDIAMYNILIDAMCK 492

Query: 583 AGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQT 642
            GN++ A + +  +   GL PNV    ++++   + G L +A    + M   G  P   +
Sbjct: 493 FGNLKDARKLFSELFVQGLLPNVQIYTTIINNLCKEGLLDEALEAFRNMEGDGCPPDEFS 552

Query: 643 YTLLL 647
           Y +++
Sbjct: 553 YNVII 557



 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 93/346 (26%), Positives = 157/346 (45%), Gaps = 46/346 (13%)

Query: 354 AGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNE 413
           AG   D +T + ++      ++      +  +M++ G QP+ VT+N LI+   +     +
Sbjct: 124 AGLSPDIYTLSILIDCFSHLQRVDLAFSVFSKMIKLGLQPDAVTFNTLINGLCKVGKFAQ 183

Query: 414 ALD-----------------------------------VFKQMQVVGCEPDRVTYCTLID 438
           A++                                   +FK+M+  GC+P+ VTY  LID
Sbjct: 184 AVEFFDDFEASGCQPTVYTYTTIINGLCKIGETTAAAGLFKKMEEAGCQPNVVTYNILID 243

Query: 439 IHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIP 498
              K   ++ A+D++  M+A  +SPD FTY+ +I  L      + A  L  EM +   +P
Sbjct: 244 SLCKDKLVNEALDIFSYMKAKRISPDIFTYNSLIQGLCNFRRWKEASALLNEMTSLNIMP 303

Query: 499 NLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVF 558
           N+ T+N+++    K      A  +++ M   G EPD VTYS +M        + EA  +F
Sbjct: 304 NIFTFNVLVDAICKEGKVSEAQGVFKTMTEMGVEPDVVTYSSLMYGYSLRMEIVEARKLF 363

Query: 559 AEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRV 618
             M  K   PD   Y +L+  + KA  + +A + +  M+  GL P+    N+L+    ++
Sbjct: 364 DAMITKGCKPDAFSYNILIKGYCKAKRIDEAKQLFNEMIHQGLTPDNVNYNTLIHGLCQL 423

Query: 619 GQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGFCHE 664
           G+L +A  L + M + G  P L TY++LL            GFC E
Sbjct: 424 GRLREAQDLFKNMHSNGNLPDLFTYSMLLD-----------GFCKE 458



 Score =  131 bits (330), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 79/283 (27%), Positives = 142/283 (50%)

Query: 362 TYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQM 421
           T+  +V  + +  +      +   M   G +P+VVTY+ L++ Y     + EA  +F  M
Sbjct: 307 TFNVLVDAICKEGKVSEAQGVFKTMTEMGVEPDVVTYSSLMYGYSLRMEIVEARKLFDAM 366

Query: 422 QVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHL 481
              GC+PD  +Y  LI  + KA  +D A  ++ +M   GL+PD   Y+ +I+ L + G L
Sbjct: 367 ITKGCKPDAFSYNILIKGYCKAKRIDEAKQLFNEMIHQGLTPDNVNYNTLIHGLCQLGRL 426

Query: 482 QAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIV 541
           + A  LF  M + G +P+L TY++++    K      A +L+R MQ+   +PD   Y+I+
Sbjct: 427 REAQDLFKNMHSNGNLPDLFTYSMLLDGFCKEGYLGKAFRLFRVMQSTYLKPDIAMYNIL 486

Query: 542 MEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGL 601
           ++ +   G L +A  +F+E+  +  +P+  +Y  +++   K G + +A E +  M   G 
Sbjct: 487 IDAMCKFGNLKDARKLFSELFVQGLLPNVQIYTTIINNLCKEGLLDEALEAFRNMEGDGC 546

Query: 602 RPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYT 644
            P+  + N ++  FL+    S A  L+  M + G      T T
Sbjct: 547 PPDEFSYNVIIRGFLQYKDESRAAQLIGEMRDRGFVAEAGTTT 589



 Score =  125 bits (314), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 82/276 (29%), Positives = 133/276 (48%), Gaps = 4/276 (1%)

Query: 305 LRQWKWGPLAEEALGNTNYSMDAYQANQVLKQLQDH---TVALGFFNWLRRQAGFKHDEH 361
            R+WK        + + N   + +  N ++  +      + A G F  +  + G + D  
Sbjct: 283 FRRWKEASALLNEMTSLNIMPNIFTFNVLVDAICKEGKVSEAQGVFKTMT-EMGVEPDVV 341

Query: 362 TYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQM 421
           TY++++       +     KL D M+  GC+P+  +YN LI  Y +A  ++EA  +F +M
Sbjct: 342 TYSSLMYGYSLRMEIVEARKLFDAMITKGCKPDAFSYNILIKGYCKAKRIDEAKQLFNEM 401

Query: 422 QVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHL 481
              G  PD V Y TLI    + G L  A D++K M + G  PD FTYS++++   K G+L
Sbjct: 402 IHQGLTPDNVNYNTLIHGLCQLGRLREAQDLFKNMHSNGNLPDLFTYSMLLDGFCKEGYL 461

Query: 482 QAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIV 541
             A +LF  M +    P++  YNI+I    K  N + A KL+ ++   G  P+   Y+ +
Sbjct: 462 GKAFRLFRVMQSTYLKPDIAMYNILIDAMCKFGNLKDARKLFSELFVQGLLPNVQIYTTI 521

Query: 542 MEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLV 577
           +  L   G LDEA   F  M      PDE  Y +++
Sbjct: 522 INNLCKEGLLDEALEAFRNMEGDGCPPDEFSYNVII 557



 Score = 96.7 bits (239), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 59/212 (27%), Positives = 99/212 (46%), Gaps = 35/212 (16%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           G K D  +Y  ++    +A++     +L ++M+  G  P+ V YN LIH   +   L EA
Sbjct: 370 GCKPDAFSYNILIKGYCKAKRIDEAKQLFNEMIHQGLTPDNVNYNTLIHGLCQLGRLREA 429

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
            D+FK M   G  PD  TY  L+D   K G+L  A  +++ MQ+  L PD   Y+++I+ 
Sbjct: 430 QDLFKNMHSNGNLPDLFTYSMLLDGFCKEGYLGKAFRLFRVMQSTYLKPDIAMYNILIDA 489

Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPNL---------------------------------- 500
           + K G+L+ A +LF E+  QG +PN+                                  
Sbjct: 490 MCKFGNLKDARKLFSELFVQGLLPNVQIYTTIINNLCKEGLLDEALEAFRNMEGDGCPPD 549

Query: 501 -VTYNIMIALQAKARNYQSALKLYRDMQNAGF 531
             +YN++I    + ++   A +L  +M++ GF
Sbjct: 550 EFSYNVIIRGFLQYKDESRAAQLIGEMRDRGF 581



 Score = 80.9 bits (198), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 62/268 (23%), Positives = 120/268 (44%), Gaps = 3/268 (1%)

Query: 488 FCEMVNQGCIPNLVTYNIMIALQAKARNYQSA-LKLYRDMQNAGFEPDKVTYSIVMEVLG 546
           F  M+++  +P ++ +  +++   K   Y  A + L + M+ AG  PD  T SI+++   
Sbjct: 82  FNHMLHREPLPCIIQFTKLLSAIVKMGQYYGAVISLSKQMELAGLSPDIYTLSILIDCFS 141

Query: 547 HCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVP 606
           H   +D A +VF++M +    PD   +  L++   K G   +A E+++    +G +P V 
Sbjct: 142 HLQRVDLAFSVFSKMIKLGLQPDAVTFNTLINGLCKVGKFAQAVEFFDDFEASGCQPTVY 201

Query: 607 TCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL-SCCTEARSPYDMGFCHEL 665
           T  ++++   ++G+ + A  L + M   G +P++ TY +L+ S C +      +     +
Sbjct: 202 TYTTIINGLCKIGETTAAAGLFKKMEEAGCQPNVVTYNILIDSLCKDKLVNEALDIFSYM 261

Query: 666 MAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRESKRGLVDAVVDFLHKSGL 725
            A    P  +F  +    G           + L  M S +        + +VD + K G 
Sbjct: 262 KAKRISP-DIFTYNSLIQGLCNFRRWKEASALLNEMTSLNIMPNIFTFNVLVDAICKEGK 320

Query: 726 KEEAGSVWEVAAQKNVYPDAVKEKGMSY 753
             EA  V++   +  V PD V    + Y
Sbjct: 321 VSEAQGVFKTMTEMGVEPDVVTYSSLMY 348



 Score = 66.2 bits (160), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 40/139 (28%), Positives = 68/139 (48%)

Query: 359 DEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVF 418
           D  TY+ ++    +    G   +L   M     +P++  YN LI +  +   L +A  +F
Sbjct: 444 DLFTYSMLLDGFCKEGYLGKAFRLFRVMQSTYLKPDIAMYNILIDAMCKFGNLKDARKLF 503

Query: 419 KQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKA 478
            ++ V G  P+   Y T+I+   K G LD A++ ++ M+  G  PD F+Y+VII    + 
Sbjct: 504 SELFVQGLLPNVQIYTTIINNLCKEGLLDEALEAFRNMEGDGCPPDEFSYNVIIRGFLQY 563

Query: 479 GHLQAAHQLFCEMVNQGCI 497
                A QL  EM ++G +
Sbjct: 564 KDESRAAQLIGEMRDRGFV 582


>gi|302788594|ref|XP_002976066.1| hypothetical protein SELMODRAFT_53130 [Selaginella moellendorffii]
 gi|300156342|gb|EFJ22971.1| hypothetical protein SELMODRAFT_53130 [Selaginella moellendorffii]
          Length = 440

 Score =  163 bits (413), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 100/300 (33%), Positives = 153/300 (51%), Gaps = 8/300 (2%)

Query: 355 GFKHDEHTYTTMV-GILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNE 413
           GF  +  TY+T++ G+    R      KL   +++ G +P V TYN LI    + + +NE
Sbjct: 142 GFSPNVITYSTLISGLCRELRGVSEALKLFGSVLKQGYEPEVPTYNILIDGLLKEDRVNE 201

Query: 414 ALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIIN 473
           A ++F  +   G EPD +TY   ID   KAG ++ A+ M K M   G  PD  +++ +IN
Sbjct: 202 AFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALLMLKDMDEKGCVPDVVSHNAVIN 261

Query: 474 CLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEP 533
            L K   +  A  L   M  +GC PN +++N +I  Q +A  ++ A+  +++M   G +P
Sbjct: 262 GLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICGQCRAGKWKKAMTTFKEMLKRGVKP 321

Query: 534 DKVTYSIVMEVLGHC-----GYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRK 588
             VTY+I+++  G C     G + EA  +F  M  K  VPD   Y  L+D  GKAG +  
Sbjct: 322 TVVTYNILVD--GLCKARQEGRIKEAITLFDAMIEKGRVPDVVTYSALIDGLGKAGKLDD 379

Query: 589 AWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
           A     AM   G  PNV T NSL+S    + ++ +A  L   M+  G  P   TY  ++S
Sbjct: 380 ARRLLGAMEAKGCIPNVYTYNSLISGLCGLEKVDEALELFVAMVEKGCVPDTITYGTIIS 439



 Score =  147 bits (370), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 94/305 (30%), Positives = 161/305 (52%), Gaps = 6/305 (1%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           R+ GF  +  TY  ++  L    +      L ++M++ G  P+VVTYN L+H + +   L
Sbjct: 2   RKHGFWPNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFCKVGEL 61

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
           +EAL +F      G  PD VTY  LI+   KA  LD A  + ++M +  L PD  TY+ +
Sbjct: 62  DEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSENLVPDVVTYNSL 121

Query: 472 INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIA-LQAKARNYQSALKLYRDMQNAG 530
           +N L K G +  A  L   +V++G  PN++TY+ +I+ L  + R    ALKL+  +   G
Sbjct: 122 VNGLCKNGRVDEARML---IVDKGFSPNVITYSTLISGLCRELRGVSEALKLFGSVLKQG 178

Query: 531 FEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAW 590
           +EP+  TY+I+++ L     ++EA  +F+ + +    PD   Y + +D   KAG V  A 
Sbjct: 179 YEPEVPTYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDAL 238

Query: 591 EWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCC 650
              + M + G  P+V + N++++   +  ++ +A  LL GM   G  P+  ++  L+  C
Sbjct: 239 LMLKDMDEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLI--C 296

Query: 651 TEARS 655
            + R+
Sbjct: 297 GQCRA 301



 Score =  131 bits (329), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 83/283 (29%), Positives = 144/283 (50%), Gaps = 4/283 (1%)

Query: 335 KQLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPN 394
           ++L+  + AL  F  + +Q G++ +  TY  ++  L +  +     +L   +V+ G +P+
Sbjct: 159 RELRGVSEALKLFGSVLKQ-GYEPEVPTYNILIDGLLKEDRVNEAFELFSGLVKHGLEPD 217

Query: 395 VVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYK 454
            +TY   I    +A  + +AL + K M   GC PD V++  +I+   K   +D A  +  
Sbjct: 218 AITYTVFIDGLCKAGRVEDALLMLKDMDEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLS 277

Query: 455 KMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKAR 514
            M+A G SP+  +++ +I    +AG  + A   F EM+ +G  P +VTYNI++    KAR
Sbjct: 278 GMEAKGCSPNAISFNTLICGQCRAGKWKKAMTTFKEMLKRGVKPTVVTYNILVDGLCKAR 337

Query: 515 N---YQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEP 571
                + A+ L+  M   G  PD VTYS +++ LG  G LD+A  +   M  K  +P+  
Sbjct: 338 QEGRIKEAITLFDAMIEKGRVPDVVTYSALIDGLGKAGKLDDARRLLGAMEAKGCIPNVY 397

Query: 572 VYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSA 614
            Y  L+        V +A E + AM++ G  P+  T  +++SA
Sbjct: 398 TYNSLISGLCGLEKVDEALELFVAMVEKGCVPDTITYGTIISA 440



 Score =  129 bits (323), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 99/381 (25%), Positives = 172/381 (45%), Gaps = 39/381 (10%)

Query: 386 MVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGF 445
           M + G  PN +TYN L+        +++A  ++++M   G  PD VTY TL+    K G 
Sbjct: 1   MRKHGFWPNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFCKVGE 60

Query: 446 LDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNI 505
           LD A+ ++      G  PD  TY+ +IN   KA  L  A ++   MV++  +P++VTYN 
Sbjct: 61  LDEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSENLVPDVVTYNS 120

Query: 506 MIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYL---DEAEAVFAEMR 562
           ++    K      A  L  D    GF P+ +TYS ++   G C  L    EA  +F  + 
Sbjct: 121 LVNGLCKNGRVDEARMLIVD---KGFSPNVITYSTLIS--GLCRELRGVSEALKLFGSVL 175

Query: 563 RKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLS 622
           ++ + P+ P Y +L+D   K   V +A+E +  +++ GL P+  T    +    + G++ 
Sbjct: 176 KQGYEPEVPTYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVE 235

Query: 623 DAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGFCHELMAVSGHPAHMFLLSMPS 682
           DA  +L+ M   G  P + ++  +++           G C E        A + L  M +
Sbjct: 236 DALLMLKDMDEKGCVPDVVSHNAVIN-----------GLCKEKRV---DEAEVLLSGMEA 281

Query: 683 PG--PDGQNVRDHV------GSFLEMMHSEDRESKRGLVDAVVDF---------LHKSGL 725
            G  P+  +    +      G + + M +     KRG+   VV +           + G 
Sbjct: 282 KGCSPNAISFNTLICGQCRAGKWKKAMTTFKEMLKRGVKPTVVTYNILVDGLCKARQEGR 341

Query: 726 KEEAGSVWEVAAQKNVYPDAV 746
            +EA ++++   +K   PD V
Sbjct: 342 IKEAITLFDAMIEKGRVPDVV 362


>gi|222635128|gb|EEE65260.1| hypothetical protein OsJ_20463 [Oryza sativa Japonica Group]
          Length = 1443

 Score =  163 bits (413), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 91/313 (29%), Positives = 165/313 (52%), Gaps = 2/313 (0%)

Query: 361 HTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNE--ALDVF 418
             +  M+G+  R+ +F    +LLD M     +P++V++N LI++  ++  L    AL++ 
Sbjct: 222 QVFNAMMGVYARSGRFDDARQLLDAMRDQDIEPDLVSFNTLINARAKSGCLAAGVALELL 281

Query: 419 KQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKA 478
            +++  G  PD +TY TLI   ++   LD A+ ++++M A+   PD +TY+ +++  G+ 
Sbjct: 282 HEVRQAGLRPDAITYNTLISACSQGSNLDDAVAVFEEMIASECRPDLWTYNAMVSVHGRC 341

Query: 479 GHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTY 538
           G  Q A  +F E+V +G  P+ VTYN ++   AK  + +   ++  ++  AGF  D +TY
Sbjct: 342 GKAQEAELMFKELVEKGFQPDAVTYNSLLYAFAKEGDVERVERVCEELVKAGFRKDGITY 401

Query: 539 SIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQ 598
           + ++ + G  G LD A  ++ EMR     PD   Y +LVD  GK   + +A +  E M  
Sbjct: 402 NTMIHMYGKMGRLDLALGLYDEMRAIGCTPDAVTYTVLVDSLGKMDRISEAGKVLEEMAD 461

Query: 599 AGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYD 658
           AGL+P + T ++L+ A+ + G+  DA      M+  G+KP    Y ++L     +     
Sbjct: 462 AGLKPTLVTFSALICAYAKSGRQDDAERTFDRMVESGVKPDRLAYLVMLDVFARSDETRK 521

Query: 659 MGFCHELMAVSGH 671
           +   +  M   G+
Sbjct: 522 LMVLYRAMIKDGY 534



 Score =  145 bits (366), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 82/280 (29%), Positives = 141/280 (50%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           RQAG + D  TY T++    +         + ++M+   C+P++ TYN ++  +GR    
Sbjct: 285 RQAGLRPDAITYNTLISACSQGSNLDDAVAVFEEMIASECRPDLWTYNAMVSVHGRCGKA 344

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
            EA  +FK++   G +PD VTY +L+   AK G ++    + +++  AG   D  TY+ +
Sbjct: 345 QEAELMFKELVEKGFQPDAVTYNSLLYAFAKEGDVERVERVCEELVKAGFRKDGITYNTM 404

Query: 472 INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF 531
           I+  GK G L  A  L+ EM   GC P+ VTY +++    K      A K+  +M +AG 
Sbjct: 405 IHMYGKMGRLDLALGLYDEMRAIGCTPDAVTYTVLVDSLGKMDRISEAGKVLEEMADAGL 464

Query: 532 EPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWE 591
           +P  VT+S ++      G  D+AE  F  M      PD   Y +++D++ ++   RK   
Sbjct: 465 KPTLVTFSALICAYAKSGRQDDAERTFDRMVESGVKPDRLAYLVMLDVFARSDETRKLMV 524

Query: 592 WYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGM 631
            Y AM++ G +P+      LL+A  +  +  +   ++Q M
Sbjct: 525 LYRAMIKDGYKPDDGLYQVLLAALAKGNEHDEIEGVIQDM 564



 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 80/273 (29%), Positives = 148/273 (54%), Gaps = 6/273 (2%)

Query: 385 QMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAG 444
           +  R+G    V  +N ++  Y R+   ++A  +   M+    EPD V++ TLI+  AK+G
Sbjct: 213 RFAREGA--TVQVFNAMMGVYARSGRFDDARQLLDAMRDQDIEPDLVSFNTLINARAKSG 270

Query: 445 FL--DVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVT 502
            L   VA+++  +++ AGL PD  TY+ +I+   +  +L  A  +F EM+   C P+L T
Sbjct: 271 CLAAGVALELLHEVRQAGLRPDAITYNTLISACSQGSNLDDAVAVFEEMIASECRPDLWT 330

Query: 503 YNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMR 562
           YN M+++  +    Q A  +++++   GF+PD VTY+ ++      G ++  E V  E+ 
Sbjct: 331 YNAMVSVHGRCGKAQEAELMFKELVEKGFQPDAVTYNSLLYAFAKEGDVERVERVCEELV 390

Query: 563 RKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLS 622
           +  +  D   Y  ++ ++GK G +  A   Y+ M   G  P+  T   L+ +  ++ ++S
Sbjct: 391 KAGFRKDGITYNTMIHMYGKMGRLDLALGLYDEMRAIGCTPDAVTYTVLVDSLGKMDRIS 450

Query: 623 DAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARS 655
           +A  +L+ M + GLKP+L T++ L+  C  A+S
Sbjct: 451 EAGKVLEEMADAGLKPTLVTFSALI--CAYAKS 481



 Score =  137 bits (346), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 78/276 (28%), Positives = 138/276 (50%)

Query: 377 GAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTL 436
           G   +LL ++ + G +P+ +TYN LI +  + + L++A+ VF++M    C PD  TY  +
Sbjct: 275 GVALELLHEVRQAGLRPDAITYNTLISACSQGSNLDDAVAVFEEMIASECRPDLWTYNAM 334

Query: 437 IDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGC 496
           + +H + G    A  M+K++   G  PD  TY+ ++    K G ++   ++  E+V  G 
Sbjct: 335 VSVHGRCGKAQEAELMFKELVEKGFQPDAVTYNSLLYAFAKEGDVERVERVCEELVKAGF 394

Query: 497 IPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEA 556
             + +TYN MI +  K      AL LY +M+  G  PD VTY+++++ LG    + EA  
Sbjct: 395 RKDGITYNTMIHMYGKMGRLDLALGLYDEMRAIGCTPDAVTYTVLVDSLGKMDRISEAGK 454

Query: 557 VFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFL 616
           V  EM      P    +  L+  + K+G    A   ++ M+++G++P+      +L  F 
Sbjct: 455 VLEEMADAGLKPTLVTFSALICAYAKSGRQDDAERTFDRMVESGVKPDRLAYLVMLDVFA 514

Query: 617 RVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTE 652
           R  +      L + M+  G KP    Y +LL+   +
Sbjct: 515 RSDETRKLMVLYRAMIKDGYKPDDGLYQVLLAALAK 550



 Score =  132 bits (333), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 121/501 (24%), Positives = 209/501 (41%), Gaps = 51/501 (10%)

Query: 352  RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
            + AG+  + H Y  M+ +L   ++F  +  ++ +M   G +P++V  N L+  Y      
Sbjct: 879  KAAGYLPNMHLYRIMISLLCHNKRFRDVELMVAEMEGAGFKPDLVVLNTLLLMYTGTGNF 938

Query: 412  NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
            +  ++V+  +   G EPD  TY TLI ++++    +    +  +M   GL+P   +Y ++
Sbjct: 939  DRTIEVYHSILEAGLEPDEDTYNTLIVMYSRNFRPEEGFTLLYEMGKRGLTPKLESYKIL 998

Query: 472  INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF 531
            +   GKA   + A  LF EM  +G   N   Y++M+ +   ARN+  A  L   M+  G 
Sbjct: 999  LAASGKAKLWEQADLLFEEMRTKGYRLNRSIYHMMMKIYRNARNHSKAEHLLSAMKEDGI 1058

Query: 532  EPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWE 591
            EP   T  I+M   G  G+ DEAE V   ++  N       Y  ++D + +  +      
Sbjct: 1059 EPTIATMHILMTSYGTSGHPDEAEKVLNSLKSSNLEISTLPYSTVLDAYLRNRDYSLGIT 1118

Query: 592  WYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCT 651
                M + G+ P+     S + A     Q  DA  LL+         SLQ          
Sbjct: 1119 KLLEMKRDGVEPDHQVWTSFIRAASLCEQTDDAILLLK---------SLQ---------- 1159

Query: 652  EARSPYDMGFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRESKRG 711
                  D GF   +  ++   + +F                 V SFLE + + +  +   
Sbjct: 1160 ------DCGFDLPIRLLTERTSSLF---------------TEVDSFLEKLGTLEDSASLN 1198

Query: 712  LVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAVKEKGMSYWLINLHVMSDGTAVIALS 771
             V+A+ D L     +  A  ++++A ++++Y   +       W  +L  +S G A++AL+
Sbjct: 1199 FVNALEDLLWAFERRATASWIFQLAVKRSIYHHNIFRVEEKDWGADLRKLSAGAALVALT 1258

Query: 772  RTLAWFRKQMLISGVG----PSRIDIVTGWGRRSRVTGTSLVRQAVQELLHMFSFPFFTE 827
                W  +    S  G    P  I +VTG G  + V+    +R+ ++  L     PF   
Sbjct: 1259 ---LWLDQMQDASLQGAPESPKSIVLVTGEGEYNMVS----LRKTIRAYLLEMGSPFLPC 1311

Query: 828  NGNSGCFVGCGEPLNKWLLQS 848
               SG FV     L  WL  S
Sbjct: 1312 RSRSGRFVVKAYSLKMWLKDS 1332



 Score =  105 bits (262), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 69/261 (26%), Positives = 127/261 (48%), Gaps = 9/261 (3%)

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
           +AGF+ D  TY TM+ + G+  +      L D+M   GC P+ VTY  L+ S G+ + ++
Sbjct: 391 KAGFRKDGITYNTMIHMYGKMGRLDLALGLYDEMRAIGCTPDAVTYTVLVDSLGKMDRIS 450

Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
           EA  V ++M   G +P  VT+  LI  +AK+G  D A   + +M  +G+ PD   Y V++
Sbjct: 451 EAGKVLEEMADAGLKPTLVTFSALICAYAKSGRQDDAERTFDRMVESGVKPDRLAYLVML 510

Query: 473 NCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFE 532
           +   ++   +    L+  M+  G  P+   Y +++A  AK   +     + +DM+ A FE
Sbjct: 511 DVFARSDETRKLMVLYRAMIKDGYKPDDGLYQVLLAALAKGNEHDEIEGVIQDME-AVFE 569

Query: 533 PDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEW 592
            + +  S ++ +   C  + +  ++      + + PD      ++D + K G   K    
Sbjct: 570 MNPLVISSIL-IKAEC--ISQGASLLKRACLQGYEPDGKSLLSILDAYEKMGKHEKGLSL 626

Query: 593 YEAMLQAGLRPNVPTCNSLLS 613
            E      +R +VP  ++L+S
Sbjct: 627 LE-----WIRQHVPNSHNLIS 642



 Score = 97.4 bits (241), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 75/293 (25%), Positives = 137/293 (46%), Gaps = 4/293 (1%)

Query: 381  KLLDQMVRDGCQPNVVTYN-RLIHSYGRANYLNEALDVFKQM-QVVGCEPDRVTYCTLID 438
            +L+D   R     N+++    +I +YG+     +A +  K + Q  G   DR  +  LI 
Sbjct: 733  QLMDDAARSDISLNILSCRVAMIEAYGKLKLWQQAENFVKGLKQESGV--DRRIWNALIH 790

Query: 439  IHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIP 498
             +A++G  + A  ++  M   G  P   + + ++  L   G L   + +  E+ +     
Sbjct: 791  AYAESGLYEHARAIFDIMIKKGPLPTVESVNGMMRALIVDGRLDELYVVVQELQDLDIKI 850

Query: 499  NLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVF 558
            +  T  +M+   AKA +    +K+Y  M+ AG+ P+   Y I++ +L H     + E + 
Sbjct: 851  SKSTVLLMLEAFAKAGDVFEVMKIYNGMKAAGYLPNMHLYRIMISLLCHNKRFRDVELMV 910

Query: 559  AEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRV 618
            AEM    + PD  V   L+ ++   GN  +  E Y ++L+AGL P+  T N+L+  + R 
Sbjct: 911  AEMEGAGFKPDLVVLNTLLLMYTGTGNFDRTIEVYHSILEAGLEPDEDTYNTLIVMYSRN 970

Query: 619  GQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGFCHELMAVSGH 671
             +  + + LL  M   GL P L++Y +LL+   +A+         E M   G+
Sbjct: 971  FRPEEGFTLLYEMGKRGLTPKLESYKILLAASGKAKLWEQADLLFEEMRTKGY 1023



 Score = 75.5 bits (184), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 56/258 (21%), Positives = 109/258 (42%)

Query: 398  YNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQ 457
            +N LIH+Y  +     A  +F  M   G  P   +   ++      G LD    + +++Q
Sbjct: 785  WNALIHAYAESGLYEHARAIFDIMIKKGPLPTVESVNGMMRALIVDGRLDELYVVVQELQ 844

Query: 458  AAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQ 517
               +     T  +++    KAG +    +++  M   G +PN+  Y IMI+L    + ++
Sbjct: 845  DLDIKISKSTVLLMLEAFAKAGDVFEVMKIYNGMKAAGYLPNMHLYRIMISLLCHNKRFR 904

Query: 518  SALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLV 577
                +  +M+ AGF+PD V  + ++ +    G  D    V+  +      PDE  Y  L+
Sbjct: 905  DVELMVAEMEGAGFKPDLVVLNTLLLMYTGTGNFDRTIEVYHSILEAGLEPDEDTYNTLI 964

Query: 578  DLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLK 637
             ++ +     + +     M + GL P + +   LL+A  +      A  L + M   G +
Sbjct: 965  VMYSRNFRPEEGFTLLYEMGKRGLTPKLESYKILLAASGKAKLWEQADLLFEEMRTKGYR 1024

Query: 638  PSLQTYTLLLSCCTEARS 655
             +   Y +++     AR+
Sbjct: 1025 LNRSIYHMMMKIYRNARN 1042



 Score = 72.0 bits (175), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 74/395 (18%), Positives = 153/395 (38%), Gaps = 71/395 (17%)

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
           ++G K D   Y  M+ +  R+ +   +  L   M++DG +P+   Y  L+ +  + N  +
Sbjct: 496 ESGVKPDRLAYLVMLDVFARSDETRKLMVLYRAMIKDGYKPDDGLYQVLLAALAKGNEHD 555

Query: 413 EALDVFKQMQVV-------------------------------GCEPDRVTYCTLIDIHA 441
           E   V + M+ V                               G EPD  +  +++D + 
Sbjct: 556 EIEGVIQDMEAVFEMNPLVISSILIKAECISQGASLLKRACLQGYEPDGKSLLSILDAYE 615

Query: 442 KAG------------------------------------FLDVAMDMYKK--MQAAGLSP 463
           K G                                     +D   +  +K  ++      
Sbjct: 616 KMGKHEKGLSLLEWIRQHVPNSHNLISECSIMLLCKNGKIVDAIQEYSRKQMLKRGSFGQ 675

Query: 464 DTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLY 523
           D   Y  +I  L +A     A Q+FC+M   G +P+   +   I    +    ++A +L 
Sbjct: 676 DCDLYEYLITYLEEAELFPEACQVFCDMQFLGIVPSQKVFPSFIFQCCRLGFPETAYQLM 735

Query: 524 RDMQNAGFEPDKVTYSIVM-EVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGK 582
            D   +    + ++  + M E  G      +AE     +++++ V D  ++  L+  + +
Sbjct: 736 DDAARSDISLNILSCRVAMIEAYGKLKLWQQAENFVKGLKQESGV-DRRIWNALIHAYAE 794

Query: 583 AGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQT 642
           +G    A   ++ M++ G  P V + N ++ A +  G+L + Y ++Q + +L +K S  T
Sbjct: 795 SGLYEHARAIFDIMIKKGPLPTVESVNGMMRALIVDGRLDELYVVVQELQDLDIKISKST 854

Query: 643 YTLLLSCCTEARSPYDMGFCHELMAVSGHPAHMFL 677
             L+L    +A   +++   +  M  +G+  +M L
Sbjct: 855 VLLMLEAFAKAGDVFEVMKIYNGMKAAGYLPNMHL 889



 Score = 47.8 bits (112), Expect = 0.029,   Method: Compositional matrix adjust.
 Identities = 40/155 (25%), Positives = 68/155 (43%), Gaps = 8/155 (5%)

Query: 604 NVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL-----SCCTEARSPYD 658
            V   N+++  + R G+  DA  LL  M +  ++P L ++  L+     S C  A    +
Sbjct: 220 TVQVFNAMMGVYARSGRFDDARQLLDAMRDQDIEPDLVSFNTLINARAKSGCLAAGVALE 279

Query: 659 MGFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRESKRGLVDAVVD 718
           +   HE+      P  +   ++ S    G N+ D V  F EM+ SE R       +A+V 
Sbjct: 280 L--LHEVRQAGLRPDAITYNTLISACSQGSNLDDAVAVFEEMIASECR-PDLWTYNAMVS 336

Query: 719 FLHKSGLKEEAGSVWEVAAQKNVYPDAVKEKGMSY 753
              + G  +EA  +++   +K   PDAV    + Y
Sbjct: 337 VHGRCGKAQEAELMFKELVEKGFQPDAVTYNSLLY 371


>gi|357115347|ref|XP_003559450.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
            chloroplastic-like [Brachypodium distachyon]
          Length = 1102

 Score =  163 bits (412), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 114/417 (27%), Positives = 206/417 (49%), Gaps = 16/417 (3%)

Query: 233  RRRIVQPRSKAHSNRLNSNFKSNLQPSDAKVVECVSERFSKPSREMKIPAGLAPFSRHFA 292
            +  I+QP SKA  +  +S  +  L+ +  +     +E  +  SR +     L+P  RH  
Sbjct: 694  KEYILQPGSKADRSSFHSLMEGILKRAGMEKSIEFAENIAL-SRILLDDFFLSPLIRHLC 752

Query: 293  STGNVVESVSRILRQWKWGPLAEEALGNTNYSMDAYQANQVLKQLQDHT---VALGFFNW 349
             +   +E+   +++++       E+LG    S+     N ++  L D     VA G F+ 
Sbjct: 753  KSKKALEA-HELVKKF-------ESLG---VSLKTGSYNALICGLVDENLIDVAEGLFSE 801

Query: 350  LRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRAN 409
            ++R  G   DE TY  ++  +G++ +   + K+  +M   G +   VTYN +I    ++ 
Sbjct: 802  MKR-LGCDPDEFTYNLILDAMGKSMRIEDMLKVQKEMHCKGYESTYVTYNTIISGLVKSK 860

Query: 410  YLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYS 469
             L EA+D++ ++   G  P   TY  L+D   K G ++ A D++ +M   G  P+   Y+
Sbjct: 861  MLYEAMDLYYKLMSEGFSPTPCTYGPLLDGLLKDGKIEDAEDLFDEMLDYGCKPNRAIYN 920

Query: 470  VIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNA 529
            +++N    AG+ +   +LF  MV+QG  P++ +Y ++I     A     +L  +R +   
Sbjct: 921  ILLNGYRLAGNTEKVCELFQNMVDQGINPDIKSYTVLIGALCTAGRLNDSLSYFRQLTEL 980

Query: 530  GFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKA 589
            G EPD +TY++++  LG  G L+EA ++F +M +    P+   Y  L+   GK G   +A
Sbjct: 981  GLEPDLITYNLLIHGLGRSGRLEEAVSLFNDMEKSGIAPNLYTYNSLILYLGKEGKAAEA 1040

Query: 590  WEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLL 646
             + YE +L+ G +PNV T N+L+  +   G   +A+     M+  G  P+  TY  L
Sbjct: 1041 GKMYEELLKNGWKPNVFTYNALIGGYSVSGSTDNAFASYGQMIVGGCPPNSSTYMQL 1097



 Score =  155 bits (392), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 90/291 (30%), Positives = 156/291 (53%)

Query: 382  LLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHA 441
            L  +M R GC P+  TYN ++ + G++  + + L V K+M   G E   VTY T+I    
Sbjct: 798  LFSEMKRLGCDPDEFTYNLILDAMGKSMRIEDMLKVQKEMHCKGYESTYVTYNTIISGLV 857

Query: 442  KAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLV 501
            K+  L  AMD+Y K+ + G SP   TY  +++ L K G ++ A  LF EM++ GC PN  
Sbjct: 858  KSKMLYEAMDLYYKLMSEGFSPTPCTYGPLLDGLLKDGKIEDAEDLFDEMLDYGCKPNRA 917

Query: 502  TYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEM 561
             YNI++     A N +   +L+++M + G  PD  +Y++++  L   G L+++ + F ++
Sbjct: 918  IYNILLNGYRLAGNTEKVCELFQNMVDQGINPDIKSYTVLIGALCTAGRLNDSLSYFRQL 977

Query: 562  RRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQL 621
                  PD   Y LL+   G++G + +A   +  M ++G+ PN+ T NSL+    + G+ 
Sbjct: 978  TELGLEPDLITYNLLIHGLGRSGRLEEAVSLFNDMEKSGIAPNLYTYNSLILYLGKEGKA 1037

Query: 622  SDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGFCHELMAVSGHP 672
            ++A  + + +L  G KP++ TY  L+   + + S  +    +  M V G P
Sbjct: 1038 AEAGKMYEELLKNGWKPNVFTYNALIGGYSVSGSTDNAFASYGQMIVGGCP 1088



 Score =  155 bits (392), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 93/318 (29%), Positives = 164/318 (51%), Gaps = 1/318 (0%)

Query: 349 WLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRA 408
           W  + +  K D  TY T++   G      ++ ++ + M  DG   NVV Y  ++ +  + 
Sbjct: 310 WKMKASDQKPDRVTYITLLDKCGDNGDSRSVIEIWNAMKADGYNDNVVAYTAVVDALCQV 369

Query: 409 NYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTY 468
             ++EA DVF QM+  G EP + +Y +LI    KA  L+ A++++  M   G +P+ +TY
Sbjct: 370 GRVDEASDVFDQMKQKGIEPQQYSYNSLISGFLKADRLNHALELFNHMNIHGPTPNGYTY 429

Query: 469 SVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQN 528
            + IN  GK+G    A + +  M ++G +P++V  N ++   AK+     A +++ ++++
Sbjct: 430 VLFINYYGKSGESLKAIKRYELMKSKGIVPDVVAGNAVLYSLAKSGRLGMAKRVFHELKS 489

Query: 529 AGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRK 588
            G  PD +TY+++++        DEA  VF+EM     VPD      L+D   KAG   +
Sbjct: 490 IGVCPDNITYTMMIKCCSKASNADEAMKVFSEMIETRCVPDVLAVNSLIDTLYKAGRGNE 549

Query: 589 AWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
           AW+ +  + +  L P   T N+LL+   R G++ +  HLL+ M +    P+L TY  +L 
Sbjct: 550 AWKIFHELKEMNLDPTDCTYNTLLAGLGREGKVKEVMHLLEEMNSNSYPPNLITYNTVLD 609

Query: 649 C-CTEARSPYDMGFCHEL 665
           C C      Y +G  + +
Sbjct: 610 CLCKNGEVNYALGMLYNM 627



 Score =  143 bits (360), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 84/293 (28%), Positives = 148/293 (50%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           G+  +   YT +V  L +  +    + + DQM + G +P   +YN LI  + +A+ LN A
Sbjct: 351 GYNDNVVAYTAVVDALCQVGRVDEASDVFDQMKQKGIEPQQYSYNSLISGFLKADRLNHA 410

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
           L++F  M + G  P+  TY   I+ + K+G    A+  Y+ M++ G+ PD    + ++  
Sbjct: 411 LELFNHMNIHGPTPNGYTYVLFINYYGKSGESLKAIKRYELMKSKGIVPDVVAGNAVLYS 470

Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPD 534
           L K+G L  A ++F E+ + G  P+ +TY +MI   +KA N   A+K++ +M      PD
Sbjct: 471 LAKSGRLGMAKRVFHELKSIGVCPDNITYTMMIKCCSKASNADEAMKVFSEMIETRCVPD 530

Query: 535 KVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYE 594
            +  + +++ L   G  +EA  +F E++  N  P +  Y  L+   G+ G V++     E
Sbjct: 531 VLAVNSLIDTLYKAGRGNEAWKIFHELKEMNLDPTDCTYNTLLAGLGREGKVKEVMHLLE 590

Query: 595 AMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
            M      PN+ T N++L    + G+++ A  +L  M   G  P L +Y   L
Sbjct: 591 EMNSNSYPPNLITYNTVLDCLCKNGEVNYALGMLYNMTMKGCMPDLSSYNTAL 643



 Score =  135 bits (341), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 82/292 (28%), Positives = 146/292 (50%), Gaps = 1/292 (0%)

Query: 362 TYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQM 421
           TY+ ++   G+ R    +  LL +M   G +PNV +Y   I   G+A    EA  + ++M
Sbjct: 219 TYSVLMLAFGK-RDVETVVWLLREMEDHGVKPNVYSYTICIRVLGQAGRFEEAYKILQKM 277

Query: 422 QVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHL 481
           +  GC+PD VT   LI I   AG +  A D++ KM+A+   PD  TY  +++  G  G  
Sbjct: 278 EDEGCKPDVVTNTVLIQILCDAGRVSDAKDVFWKMKASDQKPDRVTYITLLDKCGDNGDS 337

Query: 482 QAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIV 541
           ++  +++  M   G   N+V Y  ++    +      A  ++  M+  G EP + +Y+ +
Sbjct: 338 RSVIEIWNAMKADGYNDNVVAYTAVVDALCQVGRVDEASDVFDQMKQKGIEPQQYSYNSL 397

Query: 542 MEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGL 601
           +        L+ A  +F  M      P+   Y L ++ +GK+G   KA + YE M   G+
Sbjct: 398 ISGFLKADRLNHALELFNHMNIHGPTPNGYTYVLFINYYGKSGESLKAIKRYELMKSKGI 457

Query: 602 RPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEA 653
            P+V   N++L +  + G+L  A  +   + ++G+ P   TYT+++ CC++A
Sbjct: 458 VPDVVAGNAVLYSLAKSGRLGMAKRVFHELKSIGVCPDNITYTMMIKCCSKA 509



 Score =  129 bits (324), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 89/313 (28%), Positives = 149/313 (47%), Gaps = 7/313 (2%)

Query: 339 DHTVALGFFNWLRRQAGFKHDEHTYTTMVGIL---GRARQFGAINKLLDQMVRDGCQPNV 395
           D   AL  F  + +Q    H   +   M+ ++   GR R    +    D M R   + NV
Sbjct: 91  DPAEALQLFKSVAQQPRIVHTTESCNYMLELMRAHGRVRDMAQV---FDLMQRQIVKANV 147

Query: 396 VTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKK 455
            T+  +  S G    L  A      M+  G   +  TY  LI    K+G+   AM++YK 
Sbjct: 148 GTFLTIFRSLGMEGGLRSAPVALPMMKEAGIVLNSYTYNGLIYFLVKSGYDREAMEVYKV 207

Query: 456 MQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARN 515
           M   G+ P   TYSV++   GK   ++    L  EM + G  PN+ +Y I I +  +A  
Sbjct: 208 MATDGIVPSVRTYSVLMLAFGKR-DVETVVWLLREMEDHGVKPNVYSYTICIRVLGQAGR 266

Query: 516 YQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGL 575
           ++ A K+ + M++ G +PD VT ++++++L   G + +A+ VF +M+  +  PD   Y  
Sbjct: 267 FEEAYKILQKMEDEGCKPDVVTNTVLIQILCDAGRVSDAKDVFWKMKASDQKPDRVTYIT 326

Query: 576 LVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLG 635
           L+D  G  G+ R   E + AM   G   NV    +++ A  +VG++ +A  +   M   G
Sbjct: 327 LLDKCGDNGDSRSVIEIWNAMKADGYNDNVVAYTAVVDALCQVGRVDEASDVFDQMKQKG 386

Query: 636 LKPSLQTYTLLLS 648
           ++P   +Y  L+S
Sbjct: 387 IEPQQYSYNSLIS 399



 Score =  129 bits (323), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 85/300 (28%), Positives = 152/300 (50%), Gaps = 10/300 (3%)

Query: 353 QAGFKHDEHTY-TTMVGILGRARQFGAI----NKLLDQMVRDGCQPNVVTYNRLIHSYGR 407
           Q G K D  ++ + M GIL RA    +I    N  L +++ D         + LI    +
Sbjct: 699 QPGSKADRSSFHSLMEGILKRAGMEKSIEFAENIALSRILLDD-----FFLSPLIRHLCK 753

Query: 408 ANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFT 467
           +    EA ++ K+ + +G      +Y  LI        +DVA  ++ +M+  G  PD FT
Sbjct: 754 SKKALEAHELVKKFESLGVSLKTGSYNALICGLVDENLIDVAEGLFSEMKRLGCDPDEFT 813

Query: 468 YSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQ 527
           Y++I++ +GK+  ++   ++  EM  +G     VTYN +I+   K++    A+ LY  + 
Sbjct: 814 YNLILDAMGKSMRIEDMLKVQKEMHCKGYESTYVTYNTIISGLVKSKMLYEAMDLYYKLM 873

Query: 528 NAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVR 587
           + GF P   TY  +++ L   G +++AE +F EM      P+  +Y +L++ +  AGN  
Sbjct: 874 SEGFSPTPCTYGPLLDGLLKDGKIEDAEDLFDEMLDYGCKPNRAIYNILLNGYRLAGNTE 933

Query: 588 KAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
           K  E ++ M+  G+ P++ +   L+ A    G+L+D+    + +  LGL+P L TY LL+
Sbjct: 934 KVCELFQNMVDQGINPDIKSYTVLIGALCTAGRLNDSLSYFRQLTELGLEPDLITYNLLI 993



 Score =  109 bits (272), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 104/452 (23%), Positives = 186/452 (41%), Gaps = 88/452 (19%)

Query: 362  TYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQM 421
            TY T++  L +  +      +L  M   GC P++ +YN  +H   + + L EA  +F QM
Sbjct: 603  TYNTVLDCLCKNGEVNYALGMLYNMTMKGCMPDLSSYNTALHGLVKEDRLTEAFRIFCQM 662

Query: 422  QVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKK---------------------MQAAG 460
            + V   PD  T CT++    K G ++ A+   K+                     ++ AG
Sbjct: 663  KKV-LAPDYTTLCTILPSFVKNGLMNEALHTLKEYILQPGSKADRSSFHSLMEGILKRAG 721

Query: 461  LSP---------------DTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNI 505
            +                 D F  S +I  L K+     AH+L  +  + G      +YN 
Sbjct: 722  MEKSIEFAENIALSRILLDDFFLSPLIRHLCKSKKALEAHELVKKFESLGVSLKTGSYNA 781

Query: 506  MIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLG---------------HC-G 549
            +I           A  L+ +M+  G +PD+ TY+++++ +G               HC G
Sbjct: 782  LICGLVDENLIDVAEGLFSEMKRLGCDPDEFTYNLILDAMGKSMRIEDMLKVQKEMHCKG 841

Query: 550  Y-------------------LDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAW 590
            Y                   L EA  ++ ++  + + P    YG L+D   K G +  A 
Sbjct: 842  YESTYVTYNTIISGLVKSKMLYEAMDLYYKLMSEGFSPTPCTYGPLLDGLLKDGKIEDAE 901

Query: 591  EWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL-SC 649
            + ++ ML  G +PN    N LL+ +   G       L Q M++ G+ P +++YT+L+ + 
Sbjct: 902  DLFDEMLDYGCKPNRAIYNILLNGYRLAGNTEKVCELFQNMVDQGINPDIKSYTVLIGAL 961

Query: 650  CTEARSPYDMGFCHELMAVSGHPAHM-FLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRES 708
            CT  R    + +  +L  +   P  + + L +   G  G+ + + V  F +M        
Sbjct: 962  CTAGRLNDSLSYFRQLTELGLEPDLITYNLLIHGLGRSGR-LEEAVSLFNDM-------E 1013

Query: 709  KRGLV------DAVVDFLHKSGLKEEAGSVWE 734
            K G+       ++++ +L K G   EAG ++E
Sbjct: 1014 KSGIAPNLYTYNSLILYLGKEGKAAEAGKMYE 1045



 Score = 94.4 bits (233), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 66/249 (26%), Positives = 119/249 (47%), Gaps = 2/249 (0%)

Query: 370 LGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPD 429
           L ++ + G   ++  ++   G  P+ +TY  +I    +A+  +EA+ VF +M    C PD
Sbjct: 471 LAKSGRLGMAKRVFHELKSIGVCPDNITYTMMIKCCSKASNADEAMKVFSEMIETRCVPD 530

Query: 430 RVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFC 489
            +   +LID   KAG  + A  ++ +++   L P   TY+ ++  LG+ G ++    L  
Sbjct: 531 VLAVNSLIDTLYKAGRGNEAWKIFHELKEMNLDPTDCTYNTLLAGLGREGKVKEVMHLLE 590

Query: 490 EMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCG 549
           EM +    PNL+TYN ++    K      AL +  +M   G  PD  +Y+  +  L    
Sbjct: 591 EMNSNSYPPNLITYNTVLDCLCKNGEVNYALGMLYNMTMKGCMPDLSSYNTALHGLVKED 650

Query: 550 YLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWE-WYEAMLQAGLRPNVPTC 608
            L EA  +F +M +K   PD      ++  + K G + +A     E +LQ G + +  + 
Sbjct: 651 RLTEAFRIFCQM-KKVLAPDYTTLCTILPSFVKNGLMNEALHTLKEYILQPGSKADRSSF 709

Query: 609 NSLLSAFLR 617
           +SL+   L+
Sbjct: 710 HSLMEGILK 718



 Score = 60.8 bits (146), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 40/133 (30%), Positives = 66/133 (49%), Gaps = 1/133 (0%)

Query: 343  ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLI 402
            +L +F  L  + G + D  TY  ++  LGR+ +      L + M + G  PN+ TYN LI
Sbjct: 970  SLSYFRQLT-ELGLEPDLITYNLLIHGLGRSGRLEEAVSLFNDMEKSGIAPNLYTYNSLI 1028

Query: 403  HSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLS 462
               G+     EA  +++++   G +P+  TY  LI  ++ +G  D A   Y +M   G  
Sbjct: 1029 LYLGKEGKAAEAGKMYEELLKNGWKPNVFTYNALIGGYSVSGSTDNAFASYGQMIVGGCP 1088

Query: 463  PDTFTYSVIINCL 475
            P++ TY  + N L
Sbjct: 1089 PNSSTYMQLPNQL 1101


>gi|302775582|ref|XP_002971208.1| hypothetical protein SELMODRAFT_94745 [Selaginella moellendorffii]
 gi|300161190|gb|EFJ27806.1| hypothetical protein SELMODRAFT_94745 [Selaginella moellendorffii]
          Length = 599

 Score =  163 bits (412), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 108/353 (30%), Positives = 177/353 (50%), Gaps = 41/353 (11%)

Query: 362 TYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQM 421
           TY  M+    +         L+ +M+ DG  P+VVTYN ++    +++ + EAL +F +M
Sbjct: 82  TYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKSSRVEEALLLFNEM 141

Query: 422 QVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHL 481
           + +GC P+R ++ T+I    +   +D A  ++ +M+A  + PD+++Y ++I+ L KAG L
Sbjct: 142 ERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEAKDIPPDSWSYGILIDGLAKAGKL 201

Query: 482 QAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIV 541
             A++LF  M++ G  P+ VTYN++I     A     AL+L++ M++ G  P + T++I+
Sbjct: 202 NEAYKLFQRMLDSGITPSAVTYNVVIHGMCLAYTLDEALELFKSMRSKGCRPSRFTFNIL 261

Query: 542 MEVLGHC--GYLDEAEAVFAEMRRKNWVPDEPVYG-----------------LLVDL--- 579
           ++   HC  G LDEA  +   M     VPD   Y                  LL D+   
Sbjct: 262 ID--AHCKRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKR 319

Query: 580 ---------------WGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDA 624
                            KAG +++A E  +AM+ +G  P+V T N+L+    R GQ   A
Sbjct: 320 QCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERA 379

Query: 625 YHLLQGMLNLGLKPSLQTYTLLLS-CCTEARSPYDMGFCHELMAVSGHPAHMF 676
             LL  M+  GL P++ TYT L+S  C   R P   G   + M  SG   ++F
Sbjct: 380 RELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQ-MKSSGCAPNLF 431



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 92/297 (30%), Positives = 150/297 (50%), Gaps = 1/297 (0%)

Query: 359 DEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVF 418
           D  +Y  ++  L +A +      L  +++  G  P+ V Y  LIH    AN  ++A ++F
Sbjct: 9   DSWSYGILIDGLAKAGKLNDARNLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDARELF 68

Query: 419 KQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKA 478
             M   GC P  VTY  +ID   K G L+ A D+ KKM   G  PD  TY+ +++ L K+
Sbjct: 69  ADMNRRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKS 128

Query: 479 GHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTY 538
             ++ A  LF EM   GC PN  ++N +I    +      A +++ +M+     PD  +Y
Sbjct: 129 SRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEAKDIPPDSWSY 188

Query: 539 SIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQ 598
            I+++ L   G L+EA  +F  M      P    Y +++     A  + +A E +++M  
Sbjct: 189 GILIDGLAKAGKLNEAYKLFQRMLDSGITPSAVTYNVVIHGMCLAYTLDEALELFKSMRS 248

Query: 599 AGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS-CCTEAR 654
            G RP+  T N L+ A  + G+L +A+ LL+ M + G  P + TY+ L+S  C+ AR
Sbjct: 249 KGCRPSRFTFNILIDAHCKRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIAR 305



 Score =  156 bits (395), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 100/300 (33%), Positives = 146/300 (48%), Gaps = 5/300 (1%)

Query: 359 DEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVF 418
           D  +Y  ++  L +A +     KL  +M+  G  P+ VTYN +IH    A  L+EAL++F
Sbjct: 184 DSWSYGILIDGLAKAGKLNEAYKLFQRMLDSGITPSAVTYNVVIHGMCLAYTLDEALELF 243

Query: 419 KQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKA 478
           K M+  GC P R T+  LID H K G LD A  + K+M   G  PD  TYS +I+ L   
Sbjct: 244 KSMRSKGCRPSRFTFNILIDAHCKRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSI 303

Query: 479 GHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTY 538
             +  A  L  +MV + C P +VT N +I    KA   + A ++   M ++G  PD VTY
Sbjct: 304 ARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTY 363

Query: 539 SIVMEVLGHC--GYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAM 596
           + +  V GHC  G  + A  + ++M  +   P+   Y  LV    KA  + +A   +  M
Sbjct: 364 NTL--VHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQM 421

Query: 597 LQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTY-TLLLSCCTEARS 655
             +G  PN+ T  +L+  F   GQ+     L   M+  G+ P    Y TL    C   RS
Sbjct: 422 KSSGCAPNLFTYTALILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTLAAELCKSGRS 481



 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 96/294 (32%), Positives = 143/294 (48%), Gaps = 8/294 (2%)

Query: 347 FNWLRRQAGFKH--DEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHS 404
           F  L+R     H  D  TY+T++  L    +      LL+ MV+  C+P VVT N LIH 
Sbjct: 275 FRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHG 334

Query: 405 YGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPD 464
             +A  + EA +V   M   G  PD VTY TL+  H +AG  + A ++   M A GL+P+
Sbjct: 335 LCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAPN 394

Query: 465 TFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYR 524
             TY+ +++ L KA  L  A  +F +M + GC PNL TY  +I     A      LKL+ 
Sbjct: 395 VVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLFTYTALILGFCSAGQVDGGLKLFG 454

Query: 525 DMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAE----MRRKNWVPDEPVYGLLVDLW 580
           +M  AG  PD V Y  +   L   G    A  +  E    +R + W   + VY   VD  
Sbjct: 455 EMVCAGISPDHVVYGTLAAELCKSGRSARALEILREGRESLRSEAW--GDEVYRFAVDGL 512

Query: 581 GKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNL 634
            +AG +  A  +   M++ G  P    C SL++   + GQ  +A  +L+ +++L
Sbjct: 513 LEAGKMEMALGFVRDMVRGGQLPAPERCASLVAGLCKSGQGGEARAVLEEIMDL 566



 Score =  139 bits (351), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 103/359 (28%), Positives = 173/359 (48%), Gaps = 10/359 (2%)

Query: 393 PNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDM 452
           P+  +Y  LI    +A  LN+A ++F+++   G  P  V Y +LI     A   D A ++
Sbjct: 8   PDSWSYGILIDGLAKAGKLNDARNLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDAREL 67

Query: 453 YKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAK 512
           +  M   G  P   TY+V+I+   K G L+ A  L  +M+  G +P++VTYN ++    K
Sbjct: 68  FADMNRRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCK 127

Query: 513 ARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHC--GYLDEAEAVFAEMRRKNWVPDE 570
           +   + AL L+ +M+  G  P++ +++ +  +LG C    +D+A  VF EM  K+  PD 
Sbjct: 128 SSRVEEALLLFNEMERLGCTPNRRSHNTI--ILGLCQQSKIDQACQVFHEMEAKDIPPDS 185

Query: 571 PVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQG 630
             YG+L+D   KAG + +A++ ++ ML +G+ P+  T N ++        L +A  L + 
Sbjct: 186 WSYGILIDGLAKAGKLNEAYKLFQRMLDSGITPSAVTYNVVIHGMCLAYTLDEALELFKS 245

Query: 631 MLNLGLKPSLQTYTLLLSCCTEARSPYDMGF-CHELMAVSGHPAHMFLLSMPSPGPDGQN 689
           M + G +PS  T+ +L+    + R   D  F   + M   GH   +   S    G     
Sbjct: 246 MRSKGCRPSRFTFNILIDAHCK-RGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIA 304

Query: 690 VRDHVGSFLEMMHSEDRESKRGLV--DAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAV 746
             D     LE M    R+ K  +V  + ++  L K+G  +EA  V +        PD V
Sbjct: 305 RVDDARHLLEDMVK--RQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVV 361



 Score =  135 bits (340), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 95/334 (28%), Positives = 155/334 (46%), Gaps = 2/334 (0%)

Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLI 402
           AL  FN + R  G   +  ++ T++  L +  +     ++  +M      P+  +Y  LI
Sbjct: 134 ALLLFNEMER-LGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEAKDIPPDSWSYGILI 192

Query: 403 HSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLS 462
               +A  LNEA  +F++M   G  P  VTY  +I     A  LD A++++K M++ G  
Sbjct: 193 DGLAKAGKLNEAYKLFQRMLDSGITPSAVTYNVVIHGMCLAYTLDEALELFKSMRSKGCR 252

Query: 463 PDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKL 522
           P  FT++++I+   K G L  A +L   M + G +P++VTY+ +I+          A  L
Sbjct: 253 PSRFTFNILIDAHCKRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHL 312

Query: 523 YRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGK 582
             DM     +P  VT + ++  L   G + EA  V   M      PD   Y  LV    +
Sbjct: 313 LEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCR 372

Query: 583 AGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQT 642
           AG   +A E    M+  GL PNV T  +L+S   +  +L +A  +   M + G  P+L T
Sbjct: 373 AGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLFT 432

Query: 643 YT-LLLSCCTEARSPYDMGFCHELMAVSGHPAHM 675
           YT L+L  C+  +    +    E++     P H+
Sbjct: 433 YTALILGFCSAGQVDGGLKLFGEMVCAGISPDHV 466


>gi|147798083|emb|CAN67256.1| hypothetical protein VITISV_039434 [Vitis vinifera]
          Length = 722

 Score =  163 bits (412), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 92/293 (31%), Positives = 153/293 (52%), Gaps = 1/293 (0%)

Query: 364 TTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQV 423
           T + G + R R   A   + + M+  GC P++ TYN LI    +  YL  A ++  +MQ+
Sbjct: 358 TLINGYVSRGRLDEAKAVMHESMLSVGCGPDIFTYNTLILGLCKKGYLVSARELMNEMQI 417

Query: 424 VGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQA 483
            GCEP+ +TY  LID   K G L+ A ++  +M   GL+ +   Y+ +I+ L K   +Q 
Sbjct: 418 KGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQD 477

Query: 484 AHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVME 543
           A  +F +M ++GC P++ T+N +I    K   ++ AL LY+DM   G   + +TY+ ++ 
Sbjct: 478 ALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIH 537

Query: 544 VLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRP 603
                G + EA  +  +M  +    D+  Y  L+    +AGN+ K    +E M+  GL P
Sbjct: 538 AFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNP 597

Query: 604 NVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS-CCTEARS 655
           N  +CN L++   R G +  A   L+ M++ GL P + TY  L++  C   R+
Sbjct: 598 NNISCNILINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRA 650



 Score =  146 bits (368), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 89/295 (30%), Positives = 150/295 (50%)

Query: 354 AGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNE 413
            G   D  TY T++  L +     +  +L+++M   GC+PNV+TY  LI  + +   L E
Sbjct: 383 VGCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEE 442

Query: 414 ALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIIN 473
           A +V  +M   G   + V Y  LI    K   +  A++M+  M + G  PD FT++ +I 
Sbjct: 443 ARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIF 502

Query: 474 CLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEP 533
            L K    + A  L+ +M+ +G I N +TYN +I    +    Q ALKL  DM   G   
Sbjct: 503 GLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPL 562

Query: 534 DKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWY 593
           D +TY+ +++ L   G +++  A+F +M  K   P+     +L++   + GN++ A E+ 
Sbjct: 563 DDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHALEFL 622

Query: 594 EAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
             M+  GL P++ T NSL++   + G+  +A +L   +   G+ P   TY  L+S
Sbjct: 623 RDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEGICPDAITYNTLIS 677



 Score =  133 bits (335), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 107/404 (26%), Positives = 186/404 (46%), Gaps = 19/404 (4%)

Query: 359 DEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVF 418
           D +T+   +  L +  +     KL+D+M+  G  PN  TY  L+H   R   ++EA  + 
Sbjct: 286 DVNTFNDAIHGLCKMLRIHEAAKLVDRMLLRGFTPNSFTYGVLMHGLCRMGKVDEARMLL 345

Query: 419 KQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMD-MYKKMQAAGLSPDTFTYSVIINCLGK 477
            ++      P+ V + TLI+ +   G LD A   M++ M + G  PD FTY+ +I  L K
Sbjct: 346 NKVP----NPNVVLFNTLINGYVSRGRLDEAKAVMHESMLSVGCGPDIFTYNTLILGLCK 401

Query: 478 AGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVT 537
            G+L +A +L  EM  +GC PN++TY I+I    K    + A  +  +M   G   + V 
Sbjct: 402 KGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVG 461

Query: 538 YSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAML 597
           Y+ ++  L     + +A  +F +M  K   PD   +  L+    K     +A   Y+ ML
Sbjct: 462 YNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDML 521

Query: 598 QAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYT-LLLSCCTEARSP 656
             G+  N  T N+L+ AFLR G + +A  L+  ML  G      TY  L+ + C      
Sbjct: 522 LEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIE 581

Query: 657 YDMGFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRESKRGLVDAV 716
             +    ++M+   +P ++    + +      N++  +    +M+H       RGL   +
Sbjct: 582 KGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHALEFLRDMIH-------RGLTPDI 634

Query: 717 VDF------LHKSGLKEEAGSVWEVAAQKNVYPDAVKEKGMSYW 754
           V +      L K+G  +EA ++++    + + PDA+    +  W
Sbjct: 635 VTYNSLINGLCKTGRAQEALNLFDKLQVEGICPDAITYNTLISW 678



 Score =  132 bits (333), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 80/287 (27%), Positives = 145/287 (50%)

Query: 362 TYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQM 421
           TYT ++    +  +      +LD+M   G   N V YN LI +  +   + +AL++F  M
Sbjct: 426 TYTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDM 485

Query: 422 QVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHL 481
              GC+PD  T+ +LI    K    + A+ +Y+ M   G+  +T TY+ +I+   + G +
Sbjct: 486 SSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAM 545

Query: 482 QAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIV 541
           Q A +L  +M+ +GC  + +TYN +I    +A N +  L L+ DM + G  P+ ++ +I+
Sbjct: 546 QEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNIL 605

Query: 542 MEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGL 601
           +  L   G +  A     +M  +   PD   Y  L++   K G  ++A   ++ +   G+
Sbjct: 606 INGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEGI 665

Query: 602 RPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
            P+  T N+L+S   + G   DA+ LL   ++ G  P+  T+ +L+S
Sbjct: 666 CPDAITYNTLISWHCKEGMFDDAHLLLSRGVDSGFIPNEVTWYILVS 712



 Score =  128 bits (321), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 86/300 (28%), Positives = 152/300 (50%), Gaps = 13/300 (4%)

Query: 296 NVVESVSRILRQWKWGPLAE-----EALGNTNYSMDAYQANQVLKQL-QDHTV--ALGFF 347
           NV+     I R  K G L E     + +     +++A   N ++  L +D  V  AL  F
Sbjct: 423 NVITYTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMF 482

Query: 348 NWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGR 407
             +  + G K D  T+ +++  L +  +F     L   M+ +G   N +TYN LIH++ R
Sbjct: 483 GDMSSK-GCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLR 541

Query: 408 ANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFT 467
              + EAL +   M   GC  D +TY  LI    +AG ++  + +++ M + GL+P+  +
Sbjct: 542 RGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNIS 601

Query: 468 YSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQ 527
            +++IN L + G++Q A +   +M+++G  P++VTYN +I    K    Q AL L+  +Q
Sbjct: 602 CNILINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQ 661

Query: 528 NAGFEPDKVTYSIVMEVLGHC--GYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGN 585
             G  PD +TY+ ++    HC  G  D+A  + +      ++P+E  + +LV  + K G+
Sbjct: 662 VEGICPDAITYNTLIS--WHCKEGMFDDAHLLLSRGVDSGFIPNEVTWYILVSNFIKEGD 719



 Score =  121 bits (303), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 94/365 (25%), Positives = 159/365 (43%), Gaps = 42/365 (11%)

Query: 328 YQANQVLKQLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMV 387
           YQ  ++L+   D   ++  F W   Q G+ H    Y  ++  LG A +F  I+ LL QM 
Sbjct: 79  YQLCKLLELPLDVPTSMELFQWAGTQKGYCHMFDVYYMLIDKLGAAGEFKTIDALLMQMK 138

Query: 388 RDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQ-VVGCEPDRVTYCTLIDIHAKAGFL 446
           ++G       +  ++  YGRA    +A  +   M+ V  CEP   +Y  ++D+       
Sbjct: 139 QEGIVFRESLFILIMKHYGRAGLPGQATRLLLDMRGVYSCEPTFRSYNVVLDVLLAGNCP 198

Query: 447 DVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIM 506
            V  +++ +M + G+SP  +T+ V++  L     + +A  L  +M   GC+PN + Y  +
Sbjct: 199 KVVPNVFYEMLSKGISPTVYTFGVVMKALCLVNEVDSACALLKDMTRHGCVPNAIVYQTL 258

Query: 507 I-ALQAKAR----------------------------------NYQSALKLYRDMQNAGF 531
           I AL    R                                      A KL   M   GF
Sbjct: 259 IHALXKVGRVNEVLKLLEEMLLMGCIPDVNTFNDAIHGLCKMLRIHEAAKLVDRMLLRGF 318

Query: 532 EPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWE 591
            P+  TY ++M  L   G +DEA  +  ++   N V    ++  L++ +   G + +A  
Sbjct: 319 TPNSFTYGVLMHGLCRMGKVDEARMLLNKVPNPNVV----LFNTLINGYVSRGRLDEAKA 374

Query: 592 -WYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS-C 649
             +E+ML  G  P++ T N+L+    + G L  A  L+  M   G +P++ TYT+L+   
Sbjct: 375 VMHESMLSVGCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRF 434

Query: 650 CTEAR 654
           C E R
Sbjct: 435 CKEGR 439



 Score =  119 bits (297), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 74/257 (28%), Positives = 124/257 (48%)

Query: 363 YTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQ 422
           Y  ++  L +  +      +   M   GC+P++ T+N LI    + N   EAL +++ M 
Sbjct: 462 YNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDML 521

Query: 423 VVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQ 482
           + G   + +TY TLI    + G +  A+ +   M   G   D  TY+ +I  L +AG+++
Sbjct: 522 LEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIE 581

Query: 483 AAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVM 542
               LF +M+++G  PN ++ NI+I    +  N Q AL+  RDM + G  PD VTY+ ++
Sbjct: 582 KGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLI 641

Query: 543 EVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLR 602
             L   G   EA  +F +++ +   PD   Y  L+    K G    A       + +G  
Sbjct: 642 NGLCKTGRAQEALNLFDKLQVEGICPDAITYNTLISWHCKEGMFDDAHLLLSRGVDSGFI 701

Query: 603 PNVPTCNSLLSAFLRVG 619
           PN  T   L+S F++ G
Sbjct: 702 PNEVTWYILVSNFIKEG 718


>gi|359490016|ref|XP_002275236.2| PREDICTED: pentatricopeptide repeat-containing protein At3g18110,
           chloroplastic-like [Vitis vinifera]
          Length = 1442

 Score =  163 bits (412), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 98/345 (28%), Positives = 181/345 (52%), Gaps = 5/345 (1%)

Query: 333 VLKQLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQ 392
           VL +     +A+  F   R +A   +    Y  M+G+  R  +F  + +LLD M   GC+
Sbjct: 197 VLGKANQEALAVEIFA--RAEAASGNTVQVYNAMMGVYARTGRFTKVQELLDLMRSRGCE 254

Query: 393 PNVVTYNRLIHSYGRANYL--NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAM 450
           P++V++N LI++  ++  +  N A+++  +++  G +PD +TY TLI   ++   L+ A+
Sbjct: 255 PDLVSFNTLINARLKSGTMVTNLAIELLNEVRRSGIQPDIITYNTLISACSRESNLEEAV 314

Query: 451 DMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQ 510
            +Y  M A    PD +TY+ +I+  G+ G  + A +LF ++ ++G +P+ VTYN ++   
Sbjct: 315 KVYNDMVAHRCQPDLWTYNAMISVYGRCGMSREAGRLFKDLESKGFLPDAVTYNSLLYAF 374

Query: 511 AKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDE 570
           A+  N     ++  DM   GF  D++TY+ ++ + G  G  D A  ++++M+     PD 
Sbjct: 375 AREGNVDKVKEICEDMVKMGFGKDEMTYNTIIHMYGKRGQHDLAFQLYSDMKLSGRSPDA 434

Query: 571 PVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQG 630
             Y +L+D  GKA  +++A E    ML A ++P + T ++L+  + + G+  +A      
Sbjct: 435 VTYTVLIDSLGKANMIKEAAEVMSEMLNARVKPTLRTFSALICGYAKAGKRVEAEETFDC 494

Query: 631 MLNLGLKPSLQTYTLLLSCCTEA-RSPYDMGFCHELMAVSGHPAH 674
           ML  G+KP    Y+++L        S   M    E++  S  P H
Sbjct: 495 MLRSGIKPDHLAYSVMLDILLRFNESGKAMKLYQEMVLHSFKPDH 539



 Score =  149 bits (377), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 80/267 (29%), Positives = 142/267 (53%)

Query: 381 KLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIH 440
           +LL+++ R G QP+++TYN LI +  R + L EA+ V+  M    C+PD  TY  +I ++
Sbjct: 280 ELLNEVRRSGIQPDIITYNTLISACSRESNLEEAVKVYNDMVAHRCQPDLWTYNAMISVY 339

Query: 441 AKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNL 500
            + G    A  ++K +++ G  PD  TY+ ++    + G++    ++  +MV  G   + 
Sbjct: 340 GRCGMSREAGRLFKDLESKGFLPDAVTYNSLLYAFAREGNVDKVKEICEDMVKMGFGKDE 399

Query: 501 VTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAE 560
           +TYN +I +  K   +  A +LY DM+ +G  PD VTY+++++ LG    + EA  V +E
Sbjct: 400 MTYNTIIHMYGKRGQHDLAFQLYSDMKLSGRSPDAVTYTVLIDSLGKANMIKEAAEVMSE 459

Query: 561 MRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQ 620
           M      P    +  L+  + KAG   +A E ++ ML++G++P+    + +L   LR  +
Sbjct: 460 MLNARVKPTLRTFSALICGYAKAGKRVEAEETFDCMLRSGIKPDHLAYSVMLDILLRFNE 519

Query: 621 LSDAYHLLQGMLNLGLKPSLQTYTLLL 647
              A  L Q M+    KP    Y ++L
Sbjct: 520 SGKAMKLYQEMVLHSFKPDHALYEVML 546



 Score =  132 bits (333), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 86/293 (29%), Positives = 140/293 (47%), Gaps = 1/293 (0%)

Query: 342 VALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRL 401
           +A+   N +RR +G + D  TY T++    R        K+ + MV   CQP++ TYN +
Sbjct: 277 LAIELLNEVRR-SGIQPDIITYNTLISACSRESNLEEAVKVYNDMVAHRCQPDLWTYNAM 335

Query: 402 IHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGL 461
           I  YGR     EA  +FK ++  G  PD VTY +L+   A+ G +D   ++ + M   G 
Sbjct: 336 ISVYGRCGMSREAGRLFKDLESKGFLPDAVTYNSLLYAFAREGNVDKVKEICEDMVKMGF 395

Query: 462 SPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALK 521
             D  TY+ II+  GK G    A QL+ +M   G  P+ VTY ++I    KA   + A +
Sbjct: 396 GKDEMTYNTIIHMYGKRGQHDLAFQLYSDMKLSGRSPDAVTYTVLIDSLGKANMIKEAAE 455

Query: 522 LYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWG 581
           +  +M NA  +P   T+S ++      G   EAE  F  M R    PD   Y +++D+  
Sbjct: 456 VMSEMLNARVKPTLRTFSALICGYAKAGKRVEAEETFDCMLRSGIKPDHLAYSVMLDILL 515

Query: 582 KAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNL 634
           +     KA + Y+ M+    +P+      +L    +  +  D + +++ M  L
Sbjct: 516 RFNESGKAMKLYQEMVLHSFKPDHALYEVMLRVLGKENREEDVHKVVKDMEEL 568



 Score =  116 bits (290), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 73/269 (27%), Positives = 134/269 (49%), Gaps = 3/269 (1%)

Query: 387 VRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFL 446
           +R    PN      ++   G+AN    A+++F + +       +V Y  ++ ++A+ G  
Sbjct: 180 LRHWYSPNARMLATILSVLGKANQEALAVEIFARAEAASGNTVQV-YNAMMGVYARTGRF 238

Query: 447 DVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHL--QAAHQLFCEMVNQGCIPNLVTYN 504
               ++   M++ G  PD  +++ +IN   K+G +    A +L  E+   G  P+++TYN
Sbjct: 239 TKVQELLDLMRSRGCEPDLVSFNTLINARLKSGTMVTNLAIELLNEVRRSGIQPDIITYN 298

Query: 505 IMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRK 564
            +I+  ++  N + A+K+Y DM     +PD  TY+ ++ V G CG   EA  +F ++  K
Sbjct: 299 TLISACSRESNLEEAVKVYNDMVAHRCQPDLWTYNAMISVYGRCGMSREAGRLFKDLESK 358

Query: 565 NWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDA 624
            ++PD   Y  L+  + + GNV K  E  E M++ G   +  T N+++  + + GQ   A
Sbjct: 359 GFLPDAVTYNSLLYAFAREGNVDKVKEICEDMVKMGFGKDEMTYNTIIHMYGKRGQHDLA 418

Query: 625 YHLLQGMLNLGLKPSLQTYTLLLSCCTEA 653
           + L   M   G  P   TYT+L+    +A
Sbjct: 419 FQLYSDMKLSGRSPDAVTYTVLIDSLGKA 447



 Score =  114 bits (284), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 107/502 (21%), Positives = 208/502 (41%), Gaps = 53/502 (10%)

Query: 352  RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
            + AG+    H Y  M+G+L + ++   +  ++ +M     +P++  +N ++  Y      
Sbjct: 879  KAAGYFPTMHLYRIMIGLLAKGKRVRDVEAMVSEMEVARFKPDLSIWNSVLKLYTGIGDF 938

Query: 412  NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
             +   V++ +Q  G +PD  TY TLI ++ +    +  + +  +M+  GL P   TY  +
Sbjct: 939  KKTGQVYQLIQEAGLKPDEDTYNTLILMYCRDRRPEEGLSLMHEMRRVGLEPKLDTYKSL 998

Query: 472  INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF 531
            I+  GK   ++ A +LF  ++++ C  +   Y+IM+ +   + N+  A KL   M+ AG 
Sbjct: 999  ISAFGKLQMVEQAEELFEGLLSKECKLDRSFYHIMMKMFRNSGNHSKAEKLLGVMKEAGV 1058

Query: 532  EPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWE 591
            EP   T  ++M      G  +EAE V   ++ +        Y  ++D + K G+   A +
Sbjct: 1059 EPTIATMHLLMVSYSGSGQPEEAEKVLDNLKVEGLPLSTLPYSSVIDAYLKNGDHNVAIQ 1118

Query: 592  WYEAMLQAGLRPNVPTCNSLLSAFLRVGQL----SDAYHLLQGMLNLGLKPSLQTYTLLL 647
                M + GL P+    + + + F+R   L    S+A  LL+ + + G    ++  T   
Sbjct: 1119 KLMEMKKDGLEPD----HRIWTCFVRAASLSQHTSEAIVLLKALRDTGFDLPIRLLT--- 1171

Query: 648  SCCTEARSPYDMGFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRE 707
                                                     ++   V + LE +   +  
Sbjct: 1172 -------------------------------------EKSDSLVSEVDNCLEKLGPLEDN 1194

Query: 708  SKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAVKEKGMSYWLINLHVMSDGTAV 767
            +    V+A+ D L    L+  A  V+++A ++++Y   V       W  +   MS G+A+
Sbjct: 1195 AAFNFVNALEDLLWAFELRATASWVFQLAVKRSIYRHDVFRVAEKDWGADFRKMSAGSAL 1254

Query: 768  IALSRTLAWFRKQMLIS-GVGPSRIDIVTGWGRRSRVTGTSLVRQAVQELLHMFSFPFFT 826
            + L+  L   +   L    + P  + ++TG    + V+  S ++  + E+      PF  
Sbjct: 1255 VGLTLWLDHMQDASLQGYPLSPKSVVLITGTAEYNMVSLNSTLKAFLWEM----GSPFLP 1310

Query: 827  ENGNSGCFVGCGEPLNKWLLQS 848
                SG  V     L  WL  S
Sbjct: 1311 CKTRSGLLVAKAHSLRMWLKDS 1332



 Score =  107 bits (266), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 62/223 (27%), Positives = 109/223 (48%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           GF  D  TY +++    R      + ++ + MV+ G   + +TYN +IH YG+    + A
Sbjct: 359 GFLPDAVTYNSLLYAFAREGNVDKVKEICEDMVKMGFGKDEMTYNTIIHMYGKRGQHDLA 418

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
             ++  M++ G  PD VTY  LID   KA  +  A ++  +M  A + P   T+S +I  
Sbjct: 419 FQLYSDMKLSGRSPDAVTYTVLIDSLGKANMIKEAAEVMSEMLNARVKPTLRTFSALICG 478

Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPD 534
             KAG    A + F  M+  G  P+ + Y++M+ +  +      A+KLY++M    F+PD
Sbjct: 479 YAKAGKRVEAEETFDCMLRSGIKPDHLAYSVMLDILLRFNESGKAMKLYQEMVLHSFKPD 538

Query: 535 KVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLV 577
              Y +++ VLG     ++   V  +M     +  + +  +LV
Sbjct: 539 HALYEVMLRVLGKENREEDVHKVVKDMEELCGMNSQVICSILV 581



 Score = 98.2 bits (243), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 84/306 (27%), Positives = 135/306 (44%), Gaps = 15/306 (4%)

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
           + GF  DE TY T++ + G+  Q     +L   M   G  P+ VTY  LI S G+AN + 
Sbjct: 392 KMGFGKDEMTYNTIIHMYGKRGQHDLAFQLYSDMKLSGRSPDAVTYTVLIDSLGKANMIK 451

Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
           EA +V  +M     +P   T+  LI  +AKAG    A + +  M  +G+ PD   YSV++
Sbjct: 452 EAAEVMSEMLNARVKPTLRTFSALICGYAKAGKRVEAEETFDCMLRSGIKPDHLAYSVML 511

Query: 473 NCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFE 532
           + L +      A +L+ EMV     P+   Y +M+ +  K    +   K+ +DM+     
Sbjct: 512 DILLRFNESGKAMKLYQEMVLHSFKPDHALYEVMLRVLGKENREEDVHKVVKDMEELCGM 571

Query: 533 PDKVTYSIVMEVLGHC-----GYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVR 587
             +V  SI+  V G C       L  A +   E+ R+N +        ++  +G +G   
Sbjct: 572 NSQVICSIL--VKGECFDHAANMLRLAISQGCELDRENLLS-------ILGSYGSSGRHL 622

Query: 588 KAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLK-PSLQTYTLL 646
           +A E  + + +     +     +L+    +  QL DA        + GL   S   Y  L
Sbjct: 623 EARELLDFLREHSSGSHQLINEALIIMLCKAHQLGDALREYGKARDFGLFCGSFTMYESL 682

Query: 647 LSCCTE 652
           L CC E
Sbjct: 683 LLCCEE 688



 Score = 96.7 bits (239), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 72/298 (24%), Positives = 139/298 (46%), Gaps = 1/298 (0%)

Query: 352  RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQ-PNVVTYNRLIHSYGRANY 410
            R  G +  +H Y +MV    +       + L+DQ    G    +V  +  +I +YG+   
Sbjct: 703  RFYGVEPSDHLYRSMVVTYCKMGFPETAHYLIDQAEEKGLLFDDVSIHTGVIEAYGKLKL 762

Query: 411  LNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSV 470
              +A  +   ++      DR  +  LI  +A +G  + A  ++  M   G SP   + + 
Sbjct: 763  WQKAESLVGSLRQKCTMVDRKVWNALIHAYAASGCYERARAIFNTMMRDGPSPTVDSVNG 822

Query: 471  IINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAG 530
            ++  L   G L   + +  E+ + G   +  +  +M+   A A N     K+Y+ M+ AG
Sbjct: 823  LMQALIVDGRLDELYVVIQELQDMGFKISKSSITLMLDAFAHAGNIFEVKKIYQGMKAAG 882

Query: 531  FEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAW 590
            + P    Y I++ +L     + + EA+ +EM    + PD  ++  ++ L+   G+ +K  
Sbjct: 883  YFPTMHLYRIMIGLLAKGKRVRDVEAMVSEMEVARFKPDLSIWNSVLKLYTGIGDFKKTG 942

Query: 591  EWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
            + Y+ + +AGL+P+  T N+L+  + R  +  +   L+  M  +GL+P L TY  L+S
Sbjct: 943  QVYQLIQEAGLKPDEDTYNTLILMYCRDRRPEEGLSLMHEMRRVGLEPKLDTYKSLIS 1000



 Score = 87.0 bits (214), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 61/289 (21%), Positives = 125/289 (43%)

Query: 359  DEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVF 418
            D   +T ++   G+ + +     L+  + +     +   +N LIH+Y  +     A  +F
Sbjct: 746  DVSIHTGVIEAYGKLKLWQKAESLVGSLRQKCTMVDRKVWNALIHAYAASGCYERARAIF 805

Query: 419  KQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKA 478
              M   G  P   +   L+      G LD    + +++Q  G      + +++++    A
Sbjct: 806  NTMMRDGPSPTVDSVNGLMQALIVDGRLDELYVVIQELQDMGFKISKSSITLMLDAFAHA 865

Query: 479  GHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTY 538
            G++    +++  M   G  P +  Y IMI L AK +  +    +  +M+ A F+PD   +
Sbjct: 866  GNIFEVKKIYQGMKAAGYFPTMHLYRIMIGLLAKGKRVRDVEAMVSEMEVARFKPDLSIW 925

Query: 539  SIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQ 598
            + V+++    G   +   V+  ++     PDE  Y  L+ ++ +     +       M +
Sbjct: 926  NSVLKLYTGIGDFKKTGQVYQLIQEAGLKPDEDTYNTLILMYCRDRRPEEGLSLMHEMRR 985

Query: 599  AGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
             GL P + T  SL+SAF ++  +  A  L +G+L+   K     Y +++
Sbjct: 986  VGLEPKLDTYKSLISAFGKLQMVEQAEELFEGLLSKECKLDRSFYHIMM 1034



 Score = 86.3 bits (212), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 78/371 (21%), Positives = 153/371 (41%), Gaps = 5/371 (1%)

Query: 376  FGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCT 435
            F   +++   M   G +P+   Y  ++ +Y +  +   A  +  Q +  G   D V+  T
Sbjct: 692  FAEASQIFSDMRFYGVEPSDHLYRSMVVTYCKMGFPETAHYLIDQAEEKGLLFDDVSIHT 751

Query: 436  -LIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQ 494
             +I+ + K      A  +   ++      D   ++ +I+    +G  + A  +F  M+  
Sbjct: 752  GVIEAYGKLKLWQKAESLVGSLRQKCTMVDRKVWNALIHAYAASGCYERARAIFNTMMRD 811

Query: 495  GCIPNLVTYN-IMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDE 553
            G  P + + N +M AL    R       + +++Q+ GF+  K + +++++   H G + E
Sbjct: 812  GPSPTVDSVNGLMQALIVDGR-LDELYVVIQELQDMGFKISKSSITLMLDAFAHAGNIFE 870

Query: 554  AEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLS 613
             + ++  M+   + P   +Y +++ L  K   VR        M  A  +P++   NS+L 
Sbjct: 871  VKKIYQGMKAAGYFPTMHLYRIMIGLLAKGKRVRDVEAMVSEMEVARFKPDLSIWNSVLK 930

Query: 614  AFLRVGQLSDAYHLLQGMLNLGLKPSLQTY-TLLLSCCTEARSPYDMGFCHELMAVSGHP 672
             +  +G       + Q +   GLKP   TY TL+L  C + R    +   HE+  V   P
Sbjct: 931  LYTGIGDFKKTGQVYQLIQEAGLKPDEDTYNTLILMYCRDRRPEEGLSLMHEMRRVGLEP 990

Query: 673  AHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRESKRGLVDAVVDFLHKSGLKEEAGSV 732
                  S+ S     Q V +      E + S++ +  R     ++     SG   +A  +
Sbjct: 991  KLDTYKSLISAFGKLQMV-EQAEELFEGLLSKECKLDRSFYHIMMKMFRNSGNHSKAEKL 1049

Query: 733  WEVAAQKNVYP 743
              V  +  V P
Sbjct: 1050 LGVMKEAGVEP 1060



 Score = 75.1 bits (183), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 49/213 (23%), Positives = 101/213 (47%)

Query: 350  LRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRAN 409
            L ++AG K DE TY T++ +  R R+      L+ +M R G +P + TY  LI ++G+  
Sbjct: 947  LIQEAGLKPDEDTYNTLILMYCRDRRPEEGLSLMHEMRRVGLEPKLDTYKSLISAFGKLQ 1006

Query: 410  YLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYS 469
             + +A ++F+ +    C+ DR  Y  ++ +   +G    A  +   M+ AG+ P   T  
Sbjct: 1007 MVEQAEELFEGLLSKECKLDRSFYHIMMKMFRNSGNHSKAEKLLGVMKEAGVEPTIATMH 1066

Query: 470  VIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNA 529
            +++     +G  + A ++   +  +G   + + Y+ +I    K  ++  A++   +M+  
Sbjct: 1067 LLMVSYSGSGQPEEAEKVLDNLKVEGLPLSTLPYSSVIDAYLKNGDHNVAIQKLMEMKKD 1126

Query: 530  GFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMR 562
            G EPD   ++  +       +  EA  +   +R
Sbjct: 1127 GLEPDHRIWTCFVRAASLSQHTSEAIVLLKALR 1159


>gi|449432854|ref|XP_004134213.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g06920-like [Cucumis sativus]
          Length = 904

 Score =  163 bits (412), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 106/382 (27%), Positives = 184/382 (48%), Gaps = 2/382 (0%)

Query: 359 DEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVF 418
           D  TY +++  LGR  +     KL +QM+     PN V Y  LI ++ +     +   ++
Sbjct: 478 DAVTYCSLIEGLGRHGRVDEAYKLYEQMLDANQIPNAVVYTSLIRNFFKCGRKEDGHKIY 537

Query: 419 KQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKA 478
            +M  +GC PD +   T +D   KAG ++    ++++++  G  PD  +Y+++I+ L KA
Sbjct: 538 NEMLRLGCSPDLLLLNTYMDCVFKAGEIEKGRALFQEIKNLGFIPDARSYTILIHGLVKA 597

Query: 479 GHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTY 538
           G    A++LF  M  QGC+ +   YN +I    K+     A +L  +M+  G EP  VTY
Sbjct: 598 GFAHEAYELFYTMKEQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTKGHEPTVVTY 657

Query: 539 SIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQ 598
             V++ L     LDEA  +F E + K    +  +Y  L+D +GK G + +A+   E ++Q
Sbjct: 658 GSVIDGLAKIDRLDEAYMLFEEAKSKGIELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQ 717

Query: 599 AGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL-SCCTEARSPY 657
            GL PNV T N LL A ++  ++S+A    Q M +L   P+  TY++L+   C   +   
Sbjct: 718 KGLTPNVYTWNCLLDALVKAEEISEALVCFQSMKDLKCTPNYITYSILIHGLCKIRKFNK 777

Query: 658 DMGFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRESKRGLVDAVV 717
              F  E+      P      +M S      N+ +   +  E    +   +   + +A++
Sbjct: 778 AFVFWQEMQKQGFKPNVFTYTTMISGLAKAGNIVE-ADTLFEKFKEKGGVADSAIYNAII 836

Query: 718 DFLHKSGLKEEAGSVWEVAAQK 739
           + L  +    +A  ++E A  K
Sbjct: 837 EGLSNANRASDAYRLFEEARLK 858



 Score =  159 bits (403), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 112/419 (26%), Positives = 197/419 (47%), Gaps = 30/419 (7%)

Query: 342 VALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRL 401
           +A  FF+ ++   G   D+ TYT+M+G+L +A +     +L + M ++   P    YN +
Sbjct: 288 MAWKFFHEMKAN-GLVLDDVTYTSMIGVLCKADRLNEAVELFEHMDQNKQVPCAYAYNTM 346

Query: 402 IHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGL 461
           I  YG A    +A  + ++ +  GC P  V+Y  ++    + G +D A+  +++M+   +
Sbjct: 347 IMGYGMAGKFEDAYSLLERQRRKGCIPSVVSYNCILSCLGRKGQVDEALKKFEEMKKDAI 406

Query: 462 SPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALK 521
            P+  TY+++I+ L KAG L+ A  +   M + G  PN++T NIM+    KA+    A  
Sbjct: 407 -PNLSTYNIMIDMLCKAGKLETALVVRDAMKDAGLFPNVITVNIMVDRLCKAQRLDDACS 465

Query: 522 LYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWG 581
           ++  + +    PD VTY  ++E LG  G +DEA  ++ +M   N +P+  VY  L+  + 
Sbjct: 466 IFEGLDHKTCRPDAVTYCSLIEGLGRHGRVDEAYKLYEQMLDANQIPNAVVYTSLIRNFF 525

Query: 582 KAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQ 641
           K G      + Y  ML+ G  P++   N+ +    + G++     L Q + NLG  P  +
Sbjct: 526 KCGRKEDGHKIYNEMLRLGCSPDLLLLNTYMDCVFKAGEIEKGRALFQEIKNLGFIPDAR 585

Query: 642 TYTLLLSCCTEARSPYDMGFCHELMAVSGHPAHMFLLSMPSPGP--DGQNVRDHVGSF-- 697
           +YT+L+    +A      GF HE        A+    +M   G   D +     +  F  
Sbjct: 586 SYTILIHGLVKA------GFAHE--------AYELFYTMKEQGCVLDTRAYNTVIDGFCK 631

Query: 698 ----------LEMMHSEDRESKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAV 746
                     LE M ++  E       +V+D L K    +EA  ++E A  K +  + V
Sbjct: 632 SGKVNKAYQLLEEMKTKGHEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKGIELNVV 690



 Score =  153 bits (387), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 84/286 (29%), Positives = 150/286 (52%)

Query: 362 TYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQM 421
           TY  M+ +L +A +      + D M   G  PNV+T N ++    +A  L++A  +F+ +
Sbjct: 411 TYNIMIDMLCKAGKLETALVVRDAMKDAGLFPNVITVNIMVDRLCKAQRLDDACSIFEGL 470

Query: 422 QVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHL 481
               C PD VTYC+LI+   + G +D A  +Y++M  A   P+   Y+ +I    K G  
Sbjct: 471 DHKTCRPDAVTYCSLIEGLGRHGRVDEAYKLYEQMLDANQIPNAVVYTSLIRNFFKCGRK 530

Query: 482 QAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIV 541
           +  H+++ EM+  GC P+L+  N  +    KA   +    L+++++N GF PD  +Y+I+
Sbjct: 531 EDGHKIYNEMLRLGCSPDLLLLNTYMDCVFKAGEIEKGRALFQEIKNLGFIPDARSYTIL 590

Query: 542 MEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGL 601
           +  L   G+  EA  +F  M+ +  V D   Y  ++D + K+G V KA++  E M   G 
Sbjct: 591 IHGLVKAGFAHEAYELFYTMKEQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTKGH 650

Query: 602 RPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
            P V T  S++    ++ +L +AY L +   + G++ ++  Y+ L+
Sbjct: 651 EPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKGIELNVVIYSSLI 696



 Score =  148 bits (373), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 111/451 (24%), Positives = 201/451 (44%), Gaps = 3/451 (0%)

Query: 297 VVESVSRILRQWKWGPLAEEALGNTNYSMDAYQANQVLKQLQDHTVALGFFNWLRRQAGF 356
           V++SV +IL    WG   E  L   + + +      VL++L+D   A+ +F W  R    
Sbjct: 67  VIDSVCQILETGPWGSSVENRLAELDLNPNPELVIGVLRRLKDVNNAVNYFRWAERLTDR 126

Query: 357 KHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALD 416
            H    Y +++ ++ R R+F  + ++L++M   G  P+  T   ++ S+ ++  L EA  
Sbjct: 127 AHCREAYNSLLMVMARTRKFNCLEQILEEMSIAGFGPSNNTCIEIVLSFIKSRKLREAFT 186

Query: 417 VFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLG 476
             + M+ +   P    Y  LI   + +   D  + ++++MQ  G + +   ++ +I    
Sbjct: 187 FIQTMRKLKFRPAFSAYTNLIGALSTSRDSDCMLTLFQQMQELGYAVNVHLFTTLIRVFA 246

Query: 477 KAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKV 536
           + G + AA  L  EM +    P++V YN+ I    KA     A K + +M+  G   D V
Sbjct: 247 REGRVDAALSLLDEMKSNSLEPDVVLYNVCIDCFGKAGKVDMAWKFFHEMKANGLVLDDV 306

Query: 537 TYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAM 596
           TY+ ++ VL     L+EA  +F  M +   VP    Y  ++  +G AG    A+   E  
Sbjct: 307 TYTSMIGVLCKADRLNEAVELFEHMDQNKQVPCAYAYNTMIMGYGMAGKFEDAYSLLERQ 366

Query: 597 LQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSP 656
            + G  P+V + N +LS   R GQ+ +A    + M    + P+L TY +++    +A   
Sbjct: 367 RRKGCIPSVVSYNCILSCLGRKGQVDEALKKFEEMKKDAI-PNLSTYNIMIDMLCKAGKL 425

Query: 657 YDMGFCHELMAVSG-HPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRESKRGLVDA 715
                  + M  +G  P  + +  M       Q + D    F  + H   R        +
Sbjct: 426 ETALVVRDAMKDAGLFPNVITVNIMVDRLCKAQRLDDACSIFEGLDHKTCRPDAVTYC-S 484

Query: 716 VVDFLHKSGLKEEAGSVWEVAAQKNVYPDAV 746
           +++ L + G  +EA  ++E     N  P+AV
Sbjct: 485 LIEGLGRHGRVDEAYKLYEQMLDANQIPNAV 515



 Score =  137 bits (346), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 115/451 (25%), Positives = 190/451 (42%), Gaps = 39/451 (8%)

Query: 361 HTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQ 420
           + Y TM+   G A +F     LL++  R GC P+VV+YN ++   GR   ++EAL  F++
Sbjct: 341 YAYNTMIMGYGMAGKFEDAYSLLERQRRKGCIPSVVSYNCILSCLGRKGQVDEALKKFEE 400

Query: 421 MQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGH 480
           M+     P+  TY  +ID+  KAG L+ A+ +   M+ AGL P+  T +++++ L KA  
Sbjct: 401 MKKDAI-PNLSTYNIMIDMLCKAGKLETALVVRDAMKDAGLFPNVITVNIMVDRLCKAQR 459

Query: 481 LQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSI 540
           L  A  +F  + ++ C P+ VTY  +I    +      A KLY  M +A   P+ V Y+ 
Sbjct: 460 LDDACSIFEGLDHKTCRPDAVTYCSLIEGLGRHGRVDEAYKLYEQMLDANQIPNAVVYTS 519

Query: 541 VMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAG 600
           ++     CG  ++   ++ EM R    PD  +    +D   KAG + K    ++ +   G
Sbjct: 520 LIRNFFKCGRKEDGHKIYNEMLRLGCSPDLLLLNTYMDCVFKAGEIEKGRALFQEIKNLG 579

Query: 601 LRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMG 660
             P+  +   L+   ++ G   +AY L   M   G     + Y  ++            G
Sbjct: 580 FIPDARSYTILIHGLVKAGFAHEAYELFYTMKEQGCVLDTRAYNTVID-----------G 628

Query: 661 FCH-----------ELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRESK 709
           FC            E M   GH   +        G    +  D      E   S+  E  
Sbjct: 629 FCKSGKVNKAYQLLEEMKTKGHEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKGIELN 688

Query: 710 RGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDA----------VKEKGMSYWLINLH 759
             +  +++D   K G  +EA  + E   QK + P+           VK + +S  L+   
Sbjct: 689 VVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEISEALVCFQ 748

Query: 760 VMSDGTAVIALSRTLAWFRKQMLISGVGPSR 790
            M D      L  T  +    +LI G+   R
Sbjct: 749 SMKD------LKCTPNYITYSILIHGLCKIR 773



 Score =  133 bits (335), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 73/267 (27%), Positives = 134/267 (50%)

Query: 349 WLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRA 408
           +  ++ G   D   Y T++    ++ +     +LL++M   G +P VVTY  +I    + 
Sbjct: 608 YTMKEQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTKGHEPTVVTYGSVIDGLAKI 667

Query: 409 NYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTY 468
           + L+EA  +F++ +  G E + V Y +LID   K G +D A  + +++   GL+P+ +T+
Sbjct: 668 DRLDEAYMLFEEAKSKGIELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTW 727

Query: 469 SVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQN 528
           + +++ L KA  +  A   F  M +  C PN +TY+I+I    K R +  A   +++MQ 
Sbjct: 728 NCLLDALVKAEEISEALVCFQSMKDLKCTPNYITYSILIHGLCKIRKFNKAFVFWQEMQK 787

Query: 529 AGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRK 588
            GF+P+  TY+ ++  L   G + EA+ +F + + K  V D  +Y  +++    A     
Sbjct: 788 QGFKPNVFTYTTMISGLAKAGNIVEADTLFEKFKEKGGVADSAIYNAIIEGLSNANRASD 847

Query: 589 AWEWYEAMLQAGLRPNVPTCNSLLSAF 615
           A+  +E     G      TC  LL + 
Sbjct: 848 AYRLFEEARLKGCSIYTKTCVVLLDSL 874



 Score =  125 bits (313), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 77/296 (26%), Positives = 146/296 (49%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           +  GF  D  +YT ++  L +A       +L   M   GC  +   YN +I  + ++  +
Sbjct: 576 KNLGFIPDARSYTILIHGLVKAGFAHEAYELFYTMKEQGCVLDTRAYNTVIDGFCKSGKV 635

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
           N+A  + ++M+  G EP  VTY ++ID  AK   LD A  ++++ ++ G+  +   YS +
Sbjct: 636 NKAYQLLEEMKTKGHEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKGIELNVVIYSSL 695

Query: 472 INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF 531
           I+  GK G +  A+ +  E++ +G  PN+ T+N ++    KA     AL  ++ M++   
Sbjct: 696 IDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEISEALVCFQSMKDLKC 755

Query: 532 EPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWE 591
            P+ +TYSI++  L      ++A   + EM+++ + P+   Y  ++    KAGN+ +A  
Sbjct: 756 TPNYITYSILIHGLCKIRKFNKAFVFWQEMQKQGFKPNVFTYTTMISGLAKAGNIVEADT 815

Query: 592 WYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
            +E   + G   +    N+++       + SDAY L +     G     +T  +LL
Sbjct: 816 LFEKFKEKGGVADSAIYNAIIEGLSNANRASDAYRLFEEARLKGCSIYTKTCVVLL 871



 Score = 90.1 bits (222), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 53/211 (25%), Positives = 108/211 (51%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           +  G + +   Y++++   G+  +      +++++++ G  PNV T+N L+ +  +A  +
Sbjct: 681 KSKGIELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEI 740

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
           +EAL  F+ M+ + C P+ +TY  LI    K    + A   +++MQ  G  P+ FTY+ +
Sbjct: 741 SEALVCFQSMKDLKCTPNYITYSILIHGLCKIRKFNKAFVFWQEMQKQGFKPNVFTYTTM 800

Query: 472 INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF 531
           I+ L KAG++  A  LF +   +G + +   YN +I   + A     A +L+ + +  G 
Sbjct: 801 ISGLAKAGNIVEADTLFEKFKEKGGVADSAIYNAIIEGLSNANRASDAYRLFEEARLKGC 860

Query: 532 EPDKVTYSIVMEVLGHCGYLDEAEAVFAEMR 562
                T  ++++ L     +++A  V A +R
Sbjct: 861 SIYTKTCVVLLDSLHKAECIEQAAIVGAVLR 891


>gi|242092012|ref|XP_002436496.1| hypothetical protein SORBIDRAFT_10g003720 [Sorghum bicolor]
 gi|241914719|gb|EER87863.1| hypothetical protein SORBIDRAFT_10g003720 [Sorghum bicolor]
          Length = 698

 Score =  163 bits (412), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 87/268 (32%), Positives = 148/268 (55%)

Query: 381 KLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIH 440
           +  D M+ DG  PNV TYN L+ +     +  EAL V + M+  GC+P+ VTY TL+   
Sbjct: 143 RFFDSMLSDGVAPNVYTYNILVRALCGRGHRKEALSVLRDMRGAGCDPNAVTYNTLVAAF 202

Query: 441 AKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNL 500
            +AG +D A  +   M+  GL P+  T++ ++N + KAG ++ A ++F EMV +G  P+ 
Sbjct: 203 CRAGEVDRAERLVDMMREGGLKPNLVTFNSVVNGICKAGRMEDARKVFDEMVKEGLAPDG 262

Query: 501 VTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAE 560
           V+YN ++    K      AL ++ +M   G  PD VT++ ++ V+   G L+ A  +  E
Sbjct: 263 VSYNTLVGGYCKVGCSHEALSVFAEMTRKGIMPDVVTFTSLIHVMCKAGNLERAVGLVRE 322

Query: 561 MRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQ 620
           MR +    +E  +  L+D + K G +  A      M Q  ++P+V   N+L++ +  VG+
Sbjct: 323 MRERGLQMNEITFTALIDGFCKKGFLDDALLAVREMRQCRIQPSVVCYNALINGYCMVGR 382

Query: 621 LSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
           + +A  L++ M   G+KP + TY+ +LS
Sbjct: 383 MDEARELVREMEAKGVKPDVVTYSTILS 410



 Score =  163 bits (412), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 138/493 (27%), Positives = 224/493 (45%), Gaps = 39/493 (7%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           R AG   +  TY T+V    RA +     +L+D M   G +PN+VT+N +++   +A  +
Sbjct: 184 RGAGCDPNAVTYNTLVAAFCRAGEVDRAERLVDMMREGGLKPNLVTFNSVVNGICKAGRM 243

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
            +A  VF +M   G  PD V+Y TL+  + K G    A+ ++ +M   G+ PD  T++ +
Sbjct: 244 EDARKVFDEMVKEGLAPDGVSYNTLVGGYCKVGCSHEALSVFAEMTRKGIMPDVVTFTSL 303

Query: 472 INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF 531
           I+ + KAG+L+ A  L  EM  +G   N +T+  +I    K      AL   R+M+    
Sbjct: 304 IHVMCKAGNLERAVGLVREMRERGLQMNEITFTALIDGFCKKGFLDDALLAVREMRQCRI 363

Query: 532 EPDKVTYSIVMEVLGHC--GYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKA 589
           +P  V Y+ ++   G+C  G +DEA  +  EM  K   PD   Y  ++  + K G+   A
Sbjct: 364 QPSVVCYNALIN--GYCMVGRMDEARELVREMEAKGVKPDVVTYSTILSAYCKNGDTHSA 421

Query: 590 WEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSC 649
           ++  + ML+ G+ P+  T +SL+       +L DA+ L + M++LGL+P   TYT L+  
Sbjct: 422 FQLNQQMLENGVLPDAITYSSLIRVLCEEKRLGDAHVLFKNMISLGLQPDEVTYTSLIDG 481

Query: 650 -CTEARSPYDMGFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSED--- 705
            C E      +   H+ M  +G    +   S+   G             L  ++ E+   
Sbjct: 482 HCKEGNVERALSL-HDEMVKAGVLPDVVTYSVLINGLSKSARTKEAQRLLFKLYHEEPVP 540

Query: 706 ------------RESKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAVKEKGMSY 753
                       R ++   V A++      GL  EA  V++    +N   D     G  Y
Sbjct: 541 ANIKYDALMRCCRNAELKSVLALLKGFCMKGLMNEADKVYQSILDRNWNLD-----GSVY 595

Query: 754 -WLINLHVMSDGTAVIALSRTLAWFRKQMLISGVGP---SRIDIVTGWGRRSRVTGTSLV 809
             LI+ H   +G  + ALS     F KQML  G  P   S I ++ G   +  V      
Sbjct: 596 SVLIHGHC-REGNVMKALS-----FHKQMLQCGFAPNSTSTISLIRGLFEKGMVVEAD-- 647

Query: 810 RQAVQELLHMFSF 822
            Q +Q+LL+  S 
Sbjct: 648 -QVIQQLLNCCSL 659



 Score =  133 bits (335), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 110/429 (25%), Positives = 175/429 (40%), Gaps = 108/429 (25%)

Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLI 402
           A+G    +R + G + +E T+T ++    +          + +M +   QP+VV YN LI
Sbjct: 316 AVGLVREMRER-GLQMNEITFTALIDGFCKKGFLDDALLAVREMRQCRIQPSVVCYNALI 374

Query: 403 HSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLS 462
           + Y     ++EA ++ ++M+  G +PD VTY T++  + K G    A  + ++M   G+ 
Sbjct: 375 NGYCMVGRMDEARELVREMEAKGVKPDVVTYSTILSAYCKNGDTHSAFQLNQQMLENGVL 434

Query: 463 PDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKL 522
           PD  TYS +I  L +   L  AH LF  M++ G  P+ VTY  +I    K  N + AL L
Sbjct: 435 PDAITYSSLIRVLCEEKRLGDAHVLFKNMISLGLQPDEVTYTSLIDGHCKEGNVERALSL 494

Query: 523 YRDMQNAGFEPDKVTYSIVMEVL------------------------------------- 545
           + +M  AG  PD VTYS+++  L                                     
Sbjct: 495 HDEMVKAGVLPDVVTYSVLINGLSKSARTKEAQRLLFKLYHEEPVPANIKYDALMRCCRN 554

Query: 546 -----------GHC--GYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEW 592
                      G C  G ++EA+ V+  +  +NW  D  VY +L+    + GNV KA  +
Sbjct: 555 AELKSVLALLKGFCMKGLMNEADKVYQSILDRNWNLDGSVYSVLIHGHCREGNVMKALSF 614

Query: 593 YEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTE 652
           ++ MLQ G  PN  +  SL+      G + +A  ++Q +LN               CC+ 
Sbjct: 615 HKQMLQCGFAPNSTSTISLIRGLFEKGMVVEADQVIQQLLN---------------CCSL 659

Query: 653 ARSPYDMGFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRESKRGL 712
           A                                D +  +  +          D   K G 
Sbjct: 660 A--------------------------------DAEASKALI----------DLNLKEGN 677

Query: 713 VDAVVDFLH 721
           VDAV+D LH
Sbjct: 678 VDAVLDVLH 686



 Score =  102 bits (255), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 75/300 (25%), Positives = 127/300 (42%), Gaps = 50/300 (16%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           G K D  TY+T++    +     +  +L  QM+ +G  P+ +TY+ LI        L +A
Sbjct: 397 GVKPDVVTYSTILSAYCKNGDTHSAFQLNQQMLENGVLPDAITYSSLIRVLCEEKRLGDA 456

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
             +FK M  +G +PD VTY +LID H K G ++ A+ ++ +M  AG+ PD  TYSV+IN 
Sbjct: 457 HVLFKNMISLGLQPDEVTYTSLIDGHCKEGNVERALSLHDEMVKAGVLPDVVTYSVLING 516

Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPNLVTYN------------------------------ 504
           L K+   + A +L  ++ ++  +P  + Y+                              
Sbjct: 517 LSKSARTKEAQRLLFKLYHEEPVPANIKYDALMRCCRNAELKSVLALLKGFCMKGLMNEA 576

Query: 505 --------------------IMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEV 544
                               ++I    +  N   AL  ++ M   GF P+  +   ++  
Sbjct: 577 DKVYQSILDRNWNLDGSVYSVLIHGHCREGNVMKALSFHKQMLQCGFAPNSTSTISLIRG 636

Query: 545 LGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPN 604
           L   G + EA+ V  ++     + D      L+DL  K GNV    +    M + GL P+
Sbjct: 637 LFEKGMVVEADQVIQQLLNCCSLADAEASKALIDLNLKEGNVDAVLDVLHGMARDGLLPS 696


>gi|449513353|ref|XP_004164304.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At3g06920-like [Cucumis sativus]
          Length = 904

 Score =  162 bits (411), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 106/382 (27%), Positives = 184/382 (48%), Gaps = 2/382 (0%)

Query: 359 DEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVF 418
           D  TY +++  LGR  +     KL +QM+     PN V Y  LI ++ +     +   ++
Sbjct: 478 DAVTYCSLIEGLGRHGRVDEAYKLYEQMLDANQIPNAVVYTSLIRNFFKCGRKEDGHKIY 537

Query: 419 KQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKA 478
            +M  +GC PD +   T +D   KAG ++    ++++++  G  PD  +Y+++I+ L KA
Sbjct: 538 NEMLRLGCSPDLLLLNTYMDCVFKAGEIEKGRALFQEIKNLGFIPDARSYTILIHGLVKA 597

Query: 479 GHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTY 538
           G    A++LF  M  QGC+ +   YN +I    K+     A +L  +M+  G EP  VTY
Sbjct: 598 GFAHEAYELFYTMKEQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTKGHEPTVVTY 657

Query: 539 SIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQ 598
             V++ L     LDEA  +F E + K    +  +Y  L+D +GK G + +A+   E ++Q
Sbjct: 658 GSVIDGLAKIDRLDEAYMLFEEAKSKGIELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQ 717

Query: 599 AGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL-SCCTEARSPY 657
            GL PNV T N LL A ++  ++S+A    Q M +L   P+  TY++L+   C   +   
Sbjct: 718 KGLTPNVYTWNCLLDALVKAEEISEALVCFQSMKDLKCTPNYITYSILIHGLCKIRKFNK 777

Query: 658 DMGFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRESKRGLVDAVV 717
              F  E+      P      +M S      N+ +   +  E    +   +   + +A++
Sbjct: 778 AFVFWQEMQKQGFKPNVFTYTTMISGLAKAGNIVE-ADTLFEKFKEKGGVADSAIYNAII 836

Query: 718 DFLHKSGLKEEAGSVWEVAAQK 739
           + L  +    +A  ++E A  K
Sbjct: 837 EGLSNANRASDAYRLFEEARLK 858



 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 109/406 (26%), Positives = 190/406 (46%), Gaps = 29/406 (7%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           G   D+ TYT+M+G+L +A +     +L + M ++   P    YN +I  YG A    +A
Sbjct: 300 GLVLDDVTYTSMIGVLCKADRLNEAVELFEHMDQNKQVPCAYAYNTMIMGYGMAGKFEDA 359

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
             + ++ +  GC P  V+Y  ++    + G +D A+  +++M+   + P+  TY+++I+ 
Sbjct: 360 YSLLERQRRKGCIPSVVSYNCILSCLGRKGQVDEALKKFEEMKKDAI-PNLSTYNIMIDM 418

Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPD 534
           L KAG L+ A  +   M + G  PN++T NIM+    KA+    A  ++  + +    PD
Sbjct: 419 LCKAGKLETALVVRDAMKDAGLFPNVITVNIMVDRLCKAQRLDDACSIFEGLDHKTCRPD 478

Query: 535 KVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYE 594
            VTY  ++E LG  G +DEA  ++ +M   N +P+  VY  L+  + K G      + Y 
Sbjct: 479 AVTYCSLIEGLGRHGRVDEAYKLYEQMLDANQIPNAVVYTSLIRNFFKCGRKEDGHKIYN 538

Query: 595 AMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEAR 654
            ML+ G  P++   N+ +    + G++     L Q + NLG  P  ++YT+L+    +A 
Sbjct: 539 EMLRLGCSPDLLLLNTYMDCVFKAGEIEKGRALFQEIKNLGFIPDARSYTILIHGLVKA- 597

Query: 655 SPYDMGFCHELMAVSGHPAHMFLLSMPSPGP--DGQNVRDHVGSF------------LEM 700
                GF HE        A+    +M   G   D +     +  F            LE 
Sbjct: 598 -----GFAHE--------AYELFYTMKEQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEE 644

Query: 701 MHSEDRESKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAV 746
           M ++  E       +V+D L K    +EA  ++E A  K +  + V
Sbjct: 645 MKTKGHEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKGIELNVV 690



 Score =  153 bits (387), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 84/286 (29%), Positives = 150/286 (52%)

Query: 362 TYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQM 421
           TY  M+ +L +A +      + D M   G  PNV+T N ++    +A  L++A  +F+ +
Sbjct: 411 TYNIMIDMLCKAGKLETALVVRDAMKDAGLFPNVITVNIMVDRLCKAQRLDDACSIFEGL 470

Query: 422 QVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHL 481
               C PD VTYC+LI+   + G +D A  +Y++M  A   P+   Y+ +I    K G  
Sbjct: 471 DHKTCRPDAVTYCSLIEGLGRHGRVDEAYKLYEQMLDANQIPNAVVYTSLIRNFFKCGRK 530

Query: 482 QAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIV 541
           +  H+++ EM+  GC P+L+  N  +    KA   +    L+++++N GF PD  +Y+I+
Sbjct: 531 EDGHKIYNEMLRLGCSPDLLLLNTYMDCVFKAGEIEKGRALFQEIKNLGFIPDARSYTIL 590

Query: 542 MEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGL 601
           +  L   G+  EA  +F  M+ +  V D   Y  ++D + K+G V KA++  E M   G 
Sbjct: 591 IHGLVKAGFAHEAYELFYTMKEQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTKGH 650

Query: 602 RPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
            P V T  S++    ++ +L +AY L +   + G++ ++  Y+ L+
Sbjct: 651 EPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKGIELNVVIYSSLI 696



 Score =  147 bits (370), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 111/451 (24%), Positives = 201/451 (44%), Gaps = 3/451 (0%)

Query: 297 VVESVSRILRQWKWGPLAEEALGNTNYSMDAYQANQVLKQLQDHTVALGFFNWLRRQAGF 356
           V++SV +IL    WG   E  L   + + +      VL++L+D   A+ +F W  R    
Sbjct: 67  VIDSVCQILETGPWGSSVENRLAELDLNPNPELVIGVLRRLKDVNNAVNYFRWAERLTDR 126

Query: 357 KHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALD 416
            H    Y +++ ++ R R+F  + ++L++M   G  P+  T   ++ S+ ++  L EA  
Sbjct: 127 AHCREAYNSLLMVMARTRKFNCLEQILEEMSIAGFGPSNNTCIEIVLSFIKSRKLREAFT 186

Query: 417 VFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLG 476
             + M+ +   P    Y  LI   + +   D  + ++++MQ  G + +   ++ +I    
Sbjct: 187 FIQTMRKLKFRPAFSAYTNLIGALSTSRDSDCMLTLFQQMQELGYAVNVHLFTTLIRVFA 246

Query: 477 KAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKV 536
           + G + AA  L  EM +    P++V YN+ I    KA     A K + +M+  G   D V
Sbjct: 247 REGRVDAALSLLDEMKSNSLEPDVVLYNVCIDCFGKAGKVDMAWKXFHEMKANGLVLDDV 306

Query: 537 TYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAM 596
           TY+ ++ VL     L+EA  +F  M +   VP    Y  ++  +G AG    A+   E  
Sbjct: 307 TYTSMIGVLCKADRLNEAVELFEHMDQNKQVPCAYAYNTMIMGYGMAGKFEDAYSLLERQ 366

Query: 597 LQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSP 656
            + G  P+V + N +LS   R GQ+ +A    + M    + P+L TY +++    +A   
Sbjct: 367 RRKGCIPSVVSYNCILSCLGRKGQVDEALKKFEEMKKDAI-PNLSTYNIMIDMLCKAGKL 425

Query: 657 YDMGFCHELMAVSG-HPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRESKRGLVDA 715
                  + M  +G  P  + +  M       Q + D    F  + H   R        +
Sbjct: 426 ETALVVRDAMKDAGLFPNVITVNIMVDRLCKAQRLDDACSIFEGLDHKTCRPDAVTYC-S 484

Query: 716 VVDFLHKSGLKEEAGSVWEVAAQKNVYPDAV 746
           +++ L + G  +EA  ++E     N  P+AV
Sbjct: 485 LIEGLGRHGRVDEAYKLYEQMLDANQIPNAV 515



 Score =  137 bits (346), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 115/451 (25%), Positives = 190/451 (42%), Gaps = 39/451 (8%)

Query: 361 HTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQ 420
           + Y TM+   G A +F     LL++  R GC P+VV+YN ++   GR   ++EAL  F++
Sbjct: 341 YAYNTMIMGYGMAGKFEDAYSLLERQRRKGCIPSVVSYNCILSCLGRKGQVDEALKKFEE 400

Query: 421 MQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGH 480
           M+     P+  TY  +ID+  KAG L+ A+ +   M+ AGL P+  T +++++ L KA  
Sbjct: 401 MKKDAI-PNLSTYNIMIDMLCKAGKLETALVVRDAMKDAGLFPNVITVNIMVDRLCKAQR 459

Query: 481 LQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSI 540
           L  A  +F  + ++ C P+ VTY  +I    +      A KLY  M +A   P+ V Y+ 
Sbjct: 460 LDDACSIFEGLDHKTCRPDAVTYCSLIEGLGRHGRVDEAYKLYEQMLDANQIPNAVVYTS 519

Query: 541 VMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAG 600
           ++     CG  ++   ++ EM R    PD  +    +D   KAG + K    ++ +   G
Sbjct: 520 LIRNFFKCGRKEDGHKIYNEMLRLGCSPDLLLLNTYMDCVFKAGEIEKGRALFQEIKNLG 579

Query: 601 LRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMG 660
             P+  +   L+   ++ G   +AY L   M   G     + Y  ++            G
Sbjct: 580 FIPDARSYTILIHGLVKAGFAHEAYELFYTMKEQGCVLDTRAYNTVID-----------G 628

Query: 661 FCH-----------ELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRESK 709
           FC            E M   GH   +        G    +  D      E   S+  E  
Sbjct: 629 FCKSGKVNKAYQLLEEMKTKGHEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKGIELN 688

Query: 710 RGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDA----------VKEKGMSYWLINLH 759
             +  +++D   K G  +EA  + E   QK + P+           VK + +S  L+   
Sbjct: 689 VVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEISEALVCFQ 748

Query: 760 VMSDGTAVIALSRTLAWFRKQMLISGVGPSR 790
            M D      L  T  +    +LI G+   R
Sbjct: 749 SMKD------LKCTPNYITYSILIHGLCKIR 773



 Score =  133 bits (335), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 73/267 (27%), Positives = 134/267 (50%)

Query: 349 WLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRA 408
           +  ++ G   D   Y T++    ++ +     +LL++M   G +P VVTY  +I    + 
Sbjct: 608 YTMKEQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTKGHEPTVVTYGSVIDGLAKI 667

Query: 409 NYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTY 468
           + L+EA  +F++ +  G E + V Y +LID   K G +D A  + +++   GL+P+ +T+
Sbjct: 668 DRLDEAYMLFEEAKSKGIELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTW 727

Query: 469 SVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQN 528
           + +++ L KA  +  A   F  M +  C PN +TY+I+I    K R +  A   +++MQ 
Sbjct: 728 NCLLDALVKAEEISEALVCFQSMKDLKCTPNYITYSILIHGLCKIRKFNKAFVFWQEMQK 787

Query: 529 AGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRK 588
            GF+P+  TY+ ++  L   G + EA+ +F + + K  V D  +Y  +++    A     
Sbjct: 788 QGFKPNVFTYTTMISGLAKAGNIVEADTLFEKFKEKGGVADSAIYNAIIEGLSNANRASD 847

Query: 589 AWEWYEAMLQAGLRPNVPTCNSLLSAF 615
           A+  +E     G      TC  LL + 
Sbjct: 848 AYRLFEEARLKGCSIYTKTCVVLLDSL 874



 Score =  125 bits (313), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 77/296 (26%), Positives = 146/296 (49%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           +  GF  D  +YT ++  L +A       +L   M   GC  +   YN +I  + ++  +
Sbjct: 576 KNLGFIPDARSYTILIHGLVKAGFAHEAYELFYTMKEQGCVLDTRAYNTVIDGFCKSGKV 635

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
           N+A  + ++M+  G EP  VTY ++ID  AK   LD A  ++++ ++ G+  +   YS +
Sbjct: 636 NKAYQLLEEMKTKGHEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKGIELNVVIYSSL 695

Query: 472 INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF 531
           I+  GK G +  A+ +  E++ +G  PN+ T+N ++    KA     AL  ++ M++   
Sbjct: 696 IDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEISEALVCFQSMKDLKC 755

Query: 532 EPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWE 591
            P+ +TYSI++  L      ++A   + EM+++ + P+   Y  ++    KAGN+ +A  
Sbjct: 756 TPNYITYSILIHGLCKIRKFNKAFVFWQEMQKQGFKPNVFTYTTMISGLAKAGNIVEADT 815

Query: 592 WYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
            +E   + G   +    N+++       + SDAY L +     G     +T  +LL
Sbjct: 816 LFEKFKEKGGVADSAIYNAIIEGLSNANRASDAYRLFEEARLKGCSIYTKTCVVLL 871



 Score = 90.1 bits (222), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 53/211 (25%), Positives = 108/211 (51%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           +  G + +   Y++++   G+  +      +++++++ G  PNV T+N L+ +  +A  +
Sbjct: 681 KSKGIELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEI 740

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
           +EAL  F+ M+ + C P+ +TY  LI    K    + A   +++MQ  G  P+ FTY+ +
Sbjct: 741 SEALVCFQSMKDLKCTPNYITYSILIHGLCKIRKFNKAFVFWQEMQKQGFKPNVFTYTTM 800

Query: 472 INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF 531
           I+ L KAG++  A  LF +   +G + +   YN +I   + A     A +L+ + +  G 
Sbjct: 801 ISGLAKAGNIVEADTLFEKFKEKGGVADSAIYNAIIEGLSNANRASDAYRLFEEARLKGC 860

Query: 532 EPDKVTYSIVMEVLGHCGYLDEAEAVFAEMR 562
                T  ++++ L     +++A  V A +R
Sbjct: 861 SIYTKTCVVLLDSLHKAECIEQAAIVGAVLR 891


>gi|357454999|ref|XP_003597780.1| Beta-D-galactosidase [Medicago truncatula]
 gi|357455013|ref|XP_003597787.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355486828|gb|AES68031.1| Beta-D-galactosidase [Medicago truncatula]
 gi|355486835|gb|AES68038.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 639

 Score =  162 bits (411), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 106/366 (28%), Positives = 176/366 (48%), Gaps = 13/366 (3%)

Query: 299 ESVSRILRQWKWGPLAEEALGNTNYSMDAYQANQVLKQLQDHTVALGFFNWLRRQAGFKH 358
           E   RIL+ +KWGP AE+AL      +D     +VLK   +  V + FF W  ++  F+H
Sbjct: 64  ERFIRILKIFKWGPDAEKALEVLKLKLDIRLVREVLKIDVEVHVKIQFFKWAGKKRNFEH 123

Query: 359 DEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVF 418
           D  TY  ++  L   R  G + + +  MV+  C       + ++   GR   +N+AL +F
Sbjct: 124 DSTTYMALIRCLDENRLVGELWRTIQDMVKSPCAIGPSELSEIVKILGRVKMVNKALSIF 183

Query: 419 KQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAG-LSPDTFTYSVIINCLGK 477
            Q++   C P   TY ++I +  + G  +   ++Y +M + G   PDT TYS +I+  GK
Sbjct: 184 YQVKGRKCRPTAGTYNSVILMLMQEGHHEKVHELYNEMCSEGHCFPDTVTYSALISAFGK 243

Query: 478 AGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVT 537
                +A +LF EM   G  P    Y  ++ +  K    + AL L  +M+     P   T
Sbjct: 244 LNRDDSAVRLFDEMKENGLQPTAKIYTTLMGIYFKLGKVEEALNLVHEMRMRRCVPTVYT 303

Query: 538 YSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAML 597
           Y+ ++  LG  G +++A  V+  M +    PD  +   L+++ G++  +++A E +E M 
Sbjct: 304 YTELIRGLGKSGRVEDAYGVYKNMLKDGCKPDVVLMNNLINILGRSDRLKEAVELFEEMR 363

Query: 598 QAGLRPNVPTCNSLL-SAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSP 656
                PNV T N+++ S F      S+A   L+ M   G+ PS  TY++L+         
Sbjct: 364 LLNCTPNVVTYNTIIKSLFEDKAPPSEASSWLERMKKDGVVPSSFTYSILID-------- 415

Query: 657 YDMGFC 662
              GFC
Sbjct: 416 ---GFC 418



 Score =  149 bits (377), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 88/299 (29%), Positives = 163/299 (54%), Gaps = 11/299 (3%)

Query: 361 HTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQ 420
           +TYT ++  LG++ +      +   M++DGC+P+VV  N LI+  GR++ L EA+++F++
Sbjct: 302 YTYTELIRGLGKSGRVEDAYGVYKNMLKDGCKPDVVLMNNLINILGRSDRLKEAVELFEE 361

Query: 421 MQVVGCEPDRVTYCTLIDIHAKAGFLDVA-----MDMYKKMQAAGLSPDTFTYSVIINCL 475
           M+++ C P+ VTY T+I    K+ F D A         ++M+  G+ P +FTYS++I+  
Sbjct: 362 MRLLNCTPNVVTYNTII----KSLFEDKAPPSEASSWLERMKKDGVVPSSFTYSILIDGF 417

Query: 476 GKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDM-QNAGFEPD 534
            K   ++ A  L  EM  +G  P    Y  +I    KA+ Y++A +L++++ +N G    
Sbjct: 418 CKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINSLGKAKRYEAANELFQELKENCGSSSV 477

Query: 535 KVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYE 594
           +V Y+++++  G CG  +EA  +F EM++   +PD   Y  L+    +A  + +A+  + 
Sbjct: 478 RV-YAVMIKHFGKCGRFNEAMGLFNEMKKLGCIPDVYAYNALITGMVRADMMDEAFSLFR 536

Query: 595 AMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEA 653
            M + G  P++ + N +L+   R G    A  +   M +  +KP   +Y  +L C + A
Sbjct: 537 TMEENGCNPDINSHNIILNGLARTGGPKRAMEMFAKMKSSTIKPDAVSYNTVLGCLSRA 595



 Score =  131 bits (329), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 84/326 (25%), Positives = 143/326 (43%), Gaps = 36/326 (11%)

Query: 359 DEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVF 418
           D  TY+ ++   G+  +  +  +L D+M  +G QP    Y  L+  Y +   + EAL++ 
Sbjct: 230 DTVTYSALISAFGKLNRDDSAVRLFDEMKENGLQPTAKIYTTLMGIYFKLGKVEEALNLV 289

Query: 419 KQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKA 478
            +M++  C P   TY  LI    K+G ++ A  +YK M   G  PD    + +IN LG++
Sbjct: 290 HEMRMRRCVPTVYTYTELIRGLGKSGRVEDAYGVYKNMLKDGCKPDVVLMNNLINILGRS 349

Query: 479 GHLQAAHQLFCEMVNQGCIPNLVTYN---------------------------------- 504
             L+ A +LF EM    C PN+VTYN                                  
Sbjct: 350 DRLKEAVELFEEMRLLNCTPNVVTYNTIIKSLFEDKAPPSEASSWLERMKKDGVVPSSFT 409

Query: 505 --IMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMR 562
             I+I    K    + AL L  +M   GF P    Y  ++  LG     + A  +F E++
Sbjct: 410 YSILIDGFCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINSLGKAKRYEAANELFQELK 469

Query: 563 RKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLS 622
                    VY +++  +GK G   +A   +  M + G  P+V   N+L++  +R   + 
Sbjct: 470 ENCGSSSVRVYAVMIKHFGKCGRFNEAMGLFNEMKKLGCIPDVYAYNALITGMVRADMMD 529

Query: 623 DAYHLLQGMLNLGLKPSLQTYTLLLS 648
           +A+ L + M   G  P + ++ ++L+
Sbjct: 530 EAFSLFRTMEENGCNPDINSHNIILN 555



 Score =  125 bits (314), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 91/388 (23%), Positives = 185/388 (47%), Gaps = 4/388 (1%)

Query: 362 TYTTMVGILGRARQFGAINKLLDQMVRDG-CQPNVVTYNRLIHSYGRANYLNEALDVFKQ 420
           TY +++ +L +      +++L ++M  +G C P+ VTY+ LI ++G+ N  + A+ +F +
Sbjct: 197 TYNSVILMLMQEGHHEKVHELYNEMCSEGHCFPDTVTYSALISAFGKLNRDDSAVRLFDE 256

Query: 421 MQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGH 480
           M+  G +P    Y TL+ I+ K G ++ A+++  +M+     P  +TY+ +I  LGK+G 
Sbjct: 257 MKENGLQPTAKIYTTLMGIYFKLGKVEEALNLVHEMRMRRCVPTVYTYTELIRGLGKSGR 316

Query: 481 LQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTY-S 539
           ++ A+ ++  M+  GC P++V  N +I +  ++   + A++L+ +M+     P+ VTY +
Sbjct: 317 VEDAYGVYKNMLKDGCKPDVVLMNNLINILGRSDRLKEAVELFEEMRLLNCTPNVVTYNT 376

Query: 540 IVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQA 599
           I+  +        EA +    M++   VP    Y +L+D + K   V KA    E M + 
Sbjct: 377 IIKSLFEDKAPPSEASSWLERMKKDGVVPSSFTYSILIDGFCKTNRVEKALLLLEEMDEK 436

Query: 600 GLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTE-ARSPYD 658
           G  P      SL+++  +  +   A  L Q +       S++ Y +++    +  R    
Sbjct: 437 GFPPCPAAYCSLINSLGKAKRYEAANELFQELKENCGSSSVRVYAVMIKHFGKCGRFNEA 496

Query: 659 MGFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRESKRGLVDAVVD 718
           MG  +E+  +   P  ++  +    G    ++ D   S    M            + +++
Sbjct: 497 MGLFNEMKKLGCIP-DVYAYNALITGMVRADMMDEAFSLFRTMEENGCNPDINSHNIILN 555

Query: 719 FLHKSGLKEEAGSVWEVAAQKNVYPDAV 746
            L ++G  + A  ++       + PDAV
Sbjct: 556 GLARTGGPKRAMEMFAKMKSSTIKPDAV 583



 Score =  120 bits (301), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 57/194 (29%), Positives = 111/194 (57%)

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
           + GF      Y +++  LG+A+++ A N+L  ++  +    +V  Y  +I  +G+    N
Sbjct: 435 EKGFPPCPAAYCSLINSLGKAKRYEAANELFQELKENCGSSSVRVYAVMIKHFGKCGRFN 494

Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
           EA+ +F +M+ +GC PD   Y  LI    +A  +D A  +++ M+  G +PD  ++++I+
Sbjct: 495 EAMGLFNEMKKLGCIPDVYAYNALITGMVRADMMDEAFSLFRTMEENGCNPDINSHNIIL 554

Query: 473 NCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFE 532
           N L + G  + A ++F +M +    P+ V+YN ++   ++A  ++ A KL ++M + GFE
Sbjct: 555 NGLARTGGPKRAMEMFAKMKSSTIKPDAVSYNTVLGCLSRAGLFEEATKLMKEMNSKGFE 614

Query: 533 PDKVTYSIVMEVLG 546
            D +TYS ++E +G
Sbjct: 615 YDLITYSSILEAVG 628



 Score =  116 bits (291), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 69/238 (28%), Positives = 119/238 (50%)

Query: 383 LDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAK 442
           L++M +DG  P+  TY+ LI  + + N + +AL + ++M   G  P    YC+LI+   K
Sbjct: 395 LERMKKDGVVPSSFTYSILIDGFCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINSLGK 454

Query: 443 AGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVT 502
           A   + A +++++++    S     Y+V+I   GK G    A  LF EM   GCIP++  
Sbjct: 455 AKRYEAANELFQELKENCGSSSVRVYAVMIKHFGKCGRFNEAMGLFNEMKKLGCIPDVYA 514

Query: 503 YNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMR 562
           YN +I    +A     A  L+R M+  G  PD  +++I++  L   G    A  +FA+M+
Sbjct: 515 YNALITGMVRADMMDEAFSLFRTMEENGCNPDINSHNIILNGLARTGGPKRAMEMFAKMK 574

Query: 563 RKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQ 620
                PD   Y  ++    +AG   +A +  + M   G   ++ T +S+L A  +V +
Sbjct: 575 SSTIKPDAVSYNTVLGCLSRAGLFEEATKLMKEMNSKGFEYDLITYSSILEAVGKVDE 632



 Score =  100 bits (250), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 69/265 (26%), Positives = 126/265 (47%), Gaps = 5/265 (1%)

Query: 331 NQVLKQL-QDHTVALGFFNWLRR--QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMV 387
           N ++K L +D        +WL R  + G      TY+ ++    +  +      LL++M 
Sbjct: 375 NTIIKSLFEDKAPPSEASSWLERMKKDGVVPSSFTYSILIDGFCKTNRVEKALLLLEEMD 434

Query: 388 RDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQV-VGCEPDRVTYCTLIDIHAKAGFL 446
             G  P    Y  LI+S G+A     A ++F++++   G    RV Y  +I    K G  
Sbjct: 435 EKGFPPCPAAYCSLINSLGKAKRYEAANELFQELKENCGSSSVRV-YAVMIKHFGKCGRF 493

Query: 447 DVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIM 506
           + AM ++ +M+  G  PD + Y+ +I  + +A  +  A  LF  M   GC P++ ++NI+
Sbjct: 494 NEAMGLFNEMKKLGCIPDVYAYNALITGMVRADMMDEAFSLFRTMEENGCNPDINSHNII 553

Query: 507 IALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNW 566
           +   A+    + A++++  M+++  +PD V+Y+ V+  L   G  +EA  +  EM  K +
Sbjct: 554 LNGLARTGGPKRAMEMFAKMKSSTIKPDAVSYNTVLGCLSRAGLFEEATKLMKEMNSKGF 613

Query: 567 VPDEPVYGLLVDLWGKAGNVRKAWE 591
             D   Y  +++  GK    R   E
Sbjct: 614 EYDLITYSSILEAVGKVDEDRNMAE 638


>gi|302776656|ref|XP_002971480.1| hypothetical protein SELMODRAFT_95907 [Selaginella moellendorffii]
 gi|300160612|gb|EFJ27229.1| hypothetical protein SELMODRAFT_95907 [Selaginella moellendorffii]
          Length = 631

 Score =  162 bits (411), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 102/310 (32%), Positives = 154/310 (49%), Gaps = 3/310 (0%)

Query: 338 QDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVT 397
           Q H VA   F  L R  G       Y  ++    R  +     +L +  +     P+V T
Sbjct: 246 QMHEVA--SFMELARHDGCALSAVNYNFIIQGFIRCGRLAEATQLFESTMTKESVPDVFT 303

Query: 398 YNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQ 457
           YN LI +  ++  L EAL +F++ +  G   D  TY  L+D   KAG    A++++  MQ
Sbjct: 304 YNLLI-ALCKSKQLEEALTLFQEAEQGGVVLDVFTYSYLMDAFGKAGRAAKALEVFYNMQ 362

Query: 458 AAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQ 517
            AG  PDT  Y+V+I+CLGK G +  A +L  +M  +G +P+  TYNI+I + +    Y+
Sbjct: 363 KAGCMPDTVVYNVLISCLGKQGKVDEALELLEDMNRKGIMPDCRTYNIVIDVLSSCGRYE 422

Query: 518 SALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLV 577
            A   +  M+     PD VTY+ ++  L      DEA  +F EM+    +PD   +G L+
Sbjct: 423 KAYSFFGMMKRRKHSPDVVTYNTLLNGLKKLRRTDEACDLFDEMQANKCMPDLTTFGTLI 482

Query: 578 DLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLK 637
           D   KAG +  A E    +++ G  PN    N+L+S F R GQ+   Y L Q M+     
Sbjct: 483 DTLAKAGRMEDALEQSARLVKMGHAPNSYIYNALISGFCRSGQVDKGYELFQDMIECSCF 542

Query: 638 PSLQTYTLLL 647
           P   TYT+L+
Sbjct: 543 PDSITYTILV 552



 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 87/289 (30%), Positives = 147/289 (50%), Gaps = 1/289 (0%)

Query: 359 DEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVF 418
           D  TY  ++  L +++Q      L  +  + G   +V TY+ L+ ++G+A    +AL+VF
Sbjct: 300 DVFTYNLLIA-LCKSKQLEEALTLFQEAEQGGVVLDVFTYSYLMDAFGKAGRAAKALEVF 358

Query: 419 KQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKA 478
             MQ  GC PD V Y  LI    K G +D A+++ + M   G+ PD  TY+++I+ L   
Sbjct: 359 YNMQKAGCMPDTVVYNVLISCLGKQGKVDEALELLEDMNRKGIMPDCRTYNIVIDVLSSC 418

Query: 479 GHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTY 538
           G  + A+  F  M  +   P++VTYN ++    K R    A  L+ +MQ     PD  T+
Sbjct: 419 GRYEKAYSFFGMMKRRKHSPDVVTYNTLLNGLKKLRRTDEACDLFDEMQANKCMPDLTTF 478

Query: 539 SIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQ 598
             +++ L   G +++A    A + +    P+  +Y  L+  + ++G V K +E ++ M++
Sbjct: 479 GTLIDTLAKAGRMEDALEQSARLVKMGHAPNSYIYNALISGFCRSGQVDKGYELFQDMIE 538

Query: 599 AGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
               P+  T   L+  F R G  S A  LLQ M+  G  P+L TY +L+
Sbjct: 539 CSCFPDSITYTILVLGFSRRGHTSMAMELLQEMVREGHTPALATYNVLI 587



 Score =  149 bits (377), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 94/312 (30%), Positives = 151/312 (48%), Gaps = 4/312 (1%)

Query: 335 KQLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPN 394
           KQL++   AL  F     Q G   D  TY+ ++   G+A +     ++   M + GC P+
Sbjct: 314 KQLEE---ALTLFQE-AEQGGVVLDVFTYSYLMDAFGKAGRAAKALEVFYNMQKAGCMPD 369

Query: 395 VVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYK 454
            V YN LI   G+   ++EAL++ + M   G  PD  TY  +ID+ +  G  + A   + 
Sbjct: 370 TVVYNVLISCLGKQGKVDEALELLEDMNRKGIMPDCRTYNIVIDVLSSCGRYEKAYSFFG 429

Query: 455 KMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKAR 514
            M+    SPD  TY+ ++N L K      A  LF EM    C+P+L T+  +I   AKA 
Sbjct: 430 MMKRRKHSPDVVTYNTLLNGLKKLRRTDEACDLFDEMQANKCMPDLTTFGTLIDTLAKAG 489

Query: 515 NYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYG 574
             + AL+    +   G  P+   Y+ ++      G +D+   +F +M   +  PD   Y 
Sbjct: 490 RMEDALEQSARLVKMGHAPNSYIYNALISGFCRSGQVDKGYELFQDMIECSCFPDSITYT 549

Query: 575 LLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNL 634
           +LV  + + G+   A E  + M++ G  P + T N L+ +    GQ+ DAY L + M+  
Sbjct: 550 ILVLGFSRRGHTSMAMELLQEMVREGHTPALATYNVLIRSLSMAGQVEDAYTLFKEMIAK 609

Query: 635 GLKPSLQTYTLL 646
           G  P +QTY+ L
Sbjct: 610 GFNPDMQTYSAL 621



 Score =  129 bits (323), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 96/365 (26%), Positives = 154/365 (42%), Gaps = 39/365 (10%)

Query: 332 QVLKQLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRD-G 390
           Q   +  D   A+G  + +RR    + D   +T  +  L   R+      L D M     
Sbjct: 61  QAFGRAGDLDAAMGMLDDMRRGNFCQPDTVAFTAAMHWLCEVRRVEQAMTLFDDMRETCD 120

Query: 391 CQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVG-CEPDRVTYCTLIDIHAKAGFLDVA 449
           C P+VV YN LI  Y +A   + ALD+F++++  G C+P+ V++ TL+    K      A
Sbjct: 121 CAPDVVAYNTLIAGYCKAGDGDRALDMFRRLKQEGSCKPNAVSFDTLVIFLCKMSRATDA 180

Query: 450 MDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIAL 509
           + ++++M  AGL  D    + +I+C  + G L+ A +L   M    C  +  TY I++  
Sbjct: 181 LAVFQEMLGAGLKADVNVCNTLIHCTCRLGMLRQARRLLHHMTAHACARDAFTYGILVNA 240

Query: 510 QAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPD 569
             +A             ++ G     V Y+ +++    CG L EA  +F     K  VPD
Sbjct: 241 HCRAGQMHEVASFMELARHDGCALSAVNYNFIIQGFIRCGRLAEATQLFESTMTKESVPD 300

Query: 570 EPVYGLLV----------------------------------DLWGKAGNVRKAWEWYEA 595
              Y LL+                                  D +GKAG   KA E +  
Sbjct: 301 VFTYNLLIALCKSKQLEEALTLFQEAEQGGVVLDVFTYSYLMDAFGKAGRAAKALEVFYN 360

Query: 596 MLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTL---LLSCCTE 652
           M +AG  P+    N L+S   + G++ +A  LL+ M   G+ P  +TY +   +LS C  
Sbjct: 361 MQKAGCMPDTVVYNVLISCLGKQGKVDEALELLEDMNRKGIMPDCRTYNIVIDVLSSCGR 420

Query: 653 ARSPY 657
               Y
Sbjct: 421 YEKAY 425



 Score =  122 bits (307), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 83/291 (28%), Positives = 137/291 (47%), Gaps = 9/291 (3%)

Query: 322 NYSMDAY-QANQVLKQLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAIN 380
           +Y MDA+ +A +  K L+       F+N   ++AG   D   Y  ++  LG+  +     
Sbjct: 339 SYLMDAFGKAGRAAKALE------VFYNM--QKAGCMPDTVVYNVLISCLGKQGKVDEAL 390

Query: 381 KLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIH 440
           +LL+ M R G  P+  TYN +I          +A   F  M+     PD VTY TL++  
Sbjct: 391 ELLEDMNRKGIMPDCRTYNIVIDVLSSCGRYEKAYSFFGMMKRRKHSPDVVTYNTLLNGL 450

Query: 441 AKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNL 500
            K    D A D++ +MQA    PD  T+  +I+ L KAG ++ A +    +V  G  PN 
Sbjct: 451 KKLRRTDEACDLFDEMQANKCMPDLTTFGTLIDTLAKAGRMEDALEQSARLVKMGHAPNS 510

Query: 501 VTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAE 560
             YN +I+   ++       +L++DM      PD +TY+I++      G+   A  +  E
Sbjct: 511 YIYNALISGFCRSGQVDKGYELFQDMIECSCFPDSITYTILVLGFSRRGHTSMAMELLQE 570

Query: 561 MRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSL 611
           M R+   P    Y +L+     AG V  A+  ++ M+  G  P++ T ++L
Sbjct: 571 MVREGHTPALATYNVLIRSLSMAGQVEDAYTLFKEMIAKGFNPDMQTYSAL 621



 Score = 98.2 bits (243), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 74/301 (24%), Positives = 138/301 (45%), Gaps = 3/301 (0%)

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
           +AG   D HT T MV  + +  +   + +LL ++ + G   + VT    I ++GRA  L+
Sbjct: 11  KAGLPVDAHTATAMVKEVCKLGRTELLAELLAELRQKGVGLSEVTCTECIQAFGRAGDLD 70

Query: 413 EALDVFKQMQVVG-CEPDRVTYCTLIDIHAKAGFLDVAMDMYKKM-QAAGLSPDTFTYSV 470
            A+ +   M+    C+PD V +   +    +   ++ AM ++  M +    +PD   Y+ 
Sbjct: 71  AAMGMLDDMRRGNFCQPDTVAFTAAMHWLCEVRRVEQAMTLFDDMRETCDCAPDVVAYNT 130

Query: 471 IINCLGKAGHLQAAHQLFCEMVNQG-CIPNLVTYNIMIALQAKARNYQSALKLYRDMQNA 529
           +I    KAG    A  +F  +  +G C PN V+++ ++    K      AL ++++M  A
Sbjct: 131 LIAGYCKAGDGDRALDMFRRLKQEGSCKPNAVSFDTLVIFLCKMSRATDALAVFQEMLGA 190

Query: 530 GFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKA 589
           G + D    + ++      G L +A  +   M       D   YG+LV+   +AG + + 
Sbjct: 191 GLKADVNVCNTLIHCTCRLGMLRQARRLLHHMTAHACARDAFTYGILVNAHCRAGQMHEV 250

Query: 590 WEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSC 649
             + E     G   +    N ++  F+R G+L++A  L +  +     P + TY LL++ 
Sbjct: 251 ASFMELARHDGCALSAVNYNFIIQGFIRCGRLAEATQLFESTMTKESVPDVFTYNLLIAL 310

Query: 650 C 650
           C
Sbjct: 311 C 311



 Score = 69.3 bits (168), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 53/205 (25%), Positives = 99/205 (48%), Gaps = 3/205 (1%)

Query: 448 VAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMI 507
           +A+  YK +  AGL  D  T + ++  + K G  +   +L  E+  +G   + VT    I
Sbjct: 1   MALATYKHLLKAGLPVDAHTATAMVKEVCKLGRTELLAELLAELRQKGVGLSEVTCTECI 60

Query: 508 ALQAKARNYQSALKLYRDMQNAGF-EPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRK-N 565
               +A +  +A+ +  DM+   F +PD V ++  M  L     +++A  +F +MR   +
Sbjct: 61  QAFGRAGDLDAAMGMLDDMRRGNFCQPDTVAFTAAMHWLCEVRRVEQAMTLFDDMRETCD 120

Query: 566 WVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAG-LRPNVPTCNSLLSAFLRVGQLSDA 624
             PD   Y  L+  + KAG+  +A + +  + Q G  +PN  + ++L+    ++ + +DA
Sbjct: 121 CAPDVVAYNTLIAGYCKAGDGDRALDMFRRLKQEGSCKPNAVSFDTLVIFLCKMSRATDA 180

Query: 625 YHLLQGMLNLGLKPSLQTYTLLLSC 649
             + Q ML  GLK  +     L+ C
Sbjct: 181 LAVFQEMLGAGLKADVNVCNTLIHC 205



 Score = 66.2 bits (160), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 60/240 (25%), Positives = 106/240 (44%), Gaps = 7/240 (2%)

Query: 414 ALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIIN 473
           AL  +K +   G   D  T   ++    K G  ++  ++  +++  G+     T +  I 
Sbjct: 2   ALATYKHLLKAGLPVDAHTATAMVKEVCKLGRTELLAELLAELRQKGVGLSEVTCTECIQ 61

Query: 474 CLGKAGHLQAAHQLFCEMVNQG-CIPNLVTYNIMIALQAKARNYQSALKLYRDM-QNAGF 531
             G+AG L AA  +  +M     C P+ V +   +    + R  + A+ L+ DM +    
Sbjct: 62  AFGRAGDLDAAMGMLDDMRRGNFCQPDTVAFTAAMHWLCEVRRVEQAMTLFDDMRETCDC 121

Query: 532 EPDKVTYSIVMEVLGHC--GYLDEAEAVFAEMRRK-NWVPDEPVYGLLVDLWGKAGNVRK 588
            PD V Y+ +  + G+C  G  D A  +F  ++++ +  P+   +  LV    K      
Sbjct: 122 APDVVAYNTL--IAGYCKAGDGDRALDMFRRLKQEGSCKPNAVSFDTLVIFLCKMSRATD 179

Query: 589 AWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
           A   ++ ML AGL+ +V  CN+L+    R+G L  A  LL  M          TY +L++
Sbjct: 180 ALAVFQEMLGAGLKADVNVCNTLIHCTCRLGMLRQARRLLHHMTAHACARDAFTYGILVN 239


>gi|297852926|ref|XP_002894344.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297340186|gb|EFH70603.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 650

 Score =  162 bits (411), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 97/365 (26%), Positives = 174/365 (47%), Gaps = 45/365 (12%)

Query: 323 YSMDAYQANQVLKQLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKL 382
           + +D +  N +L  L     A   F  ++++   + DE++YT M+  +GR  ++     L
Sbjct: 234 HKLDIFAYNMLLDALAKDEKACQVFEDMKKRHC-RRDEYSYTIMIRTMGRIGKYDEAVGL 292

Query: 383 LDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAK 442
            ++M+ +G   NVV YN L+    +   +++A+ VF +M   GC P+  TY  ++++   
Sbjct: 293 FNEMITEGLTLNVVGYNTLMQVLAKGKMVDKAIQVFSRMVETGCRPNEYTYSLVLNLLVA 352

Query: 443 AG---FLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVN------ 493
            G    LD  +++ K+    G+      YS ++  L K GH+  AH+LFC+M +      
Sbjct: 353 EGQLVRLDGIVEISKRYMTQGI------YSYLVRTLSKLGHVSEAHRLFCDMWSFPVKGE 406

Query: 494 -----------------------------QGCIPNLVTYNIMIALQAKARNYQSALKLYR 524
                                        +G + + + YN + +   K +       L+ 
Sbjct: 407 RDSYMSMLESLCGAGKTIEAIEMLSKIHEKGVVTDTMMYNTVFSALGKLKQISHIHDLFE 466

Query: 525 DMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAG 584
            M+  G  PD  TY+I++   G  G +DEA  +F E+ R +  PD   Y  L++  GK G
Sbjct: 467 KMKKDGPSPDIFTYNILISSFGRVGEVDEAINIFEELERSDCKPDIISYNSLINCLGKNG 526

Query: 585 NVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYT 644
           +V +A   ++ M + GL P+V T ++L+  F +  ++  AY L + ML  G +P++ TY 
Sbjct: 527 DVDEAHVRFKEMQEKGLNPDVVTYSTLMECFGKTERVEMAYSLFEEMLVKGCQPNIVTYN 586

Query: 645 LLLSC 649
           +LL C
Sbjct: 587 ILLDC 591



 Score =  157 bits (398), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 71/189 (37%), Positives = 117/189 (61%)

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
           + G   D   Y T+   LG+ +Q   I+ L ++M +DG  P++ TYN LI S+GR   ++
Sbjct: 435 EKGVVTDTMMYNTVFSALGKLKQISHIHDLFEKMKKDGPSPDIFTYNILISSFGRVGEVD 494

Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
           EA+++F++++   C+PD ++Y +LI+   K G +D A   +K+MQ  GL+PD  TYS ++
Sbjct: 495 EAINIFEELERSDCKPDIISYNSLINCLGKNGDVDEAHVRFKEMQEKGLNPDVVTYSTLM 554

Query: 473 NCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFE 532
            C GK   ++ A+ LF EM+ +GC PN+VTYNI++    K+     A+ LY  M+  G  
Sbjct: 555 ECFGKTERVEMAYSLFEEMLVKGCQPNIVTYNILLDCLEKSGRTAEAVDLYTKMKQQGLT 614

Query: 533 PDKVTYSIV 541
           PD +TY+++
Sbjct: 615 PDSITYTVL 623



 Score =  145 bits (367), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 93/336 (27%), Positives = 161/336 (47%), Gaps = 33/336 (9%)

Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYN--- 399
           A+G FN +  + G   +   Y T++ +L + +      ++  +MV  GC+PN  TY+   
Sbjct: 289 AVGLFNEMITE-GLTLNVVGYNTLMQVLAKGKMVDKAIQVFSRMVETGCRPNEYTYSLVL 347

Query: 400 ----------RL--------------IHSY-----GRANYLNEALDVFKQMQVVGCEPDR 430
                     RL              I+SY      +  +++EA  +F  M     + +R
Sbjct: 348 NLLVAEGQLVRLDGIVEISKRYMTQGIYSYLVRTLSKLGHVSEAHRLFCDMWSFPVKGER 407

Query: 431 VTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCE 490
            +Y ++++    AG    A++M  K+   G+  DT  Y+ + + LGK   +   H LF +
Sbjct: 408 DSYMSMLESLCGAGKTIEAIEMLSKIHEKGVVTDTMMYNTVFSALGKLKQISHIHDLFEK 467

Query: 491 MVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGY 550
           M   G  P++ TYNI+I+   +      A+ ++ +++ +  +PD ++Y+ ++  LG  G 
Sbjct: 468 MKKDGPSPDIFTYNILISSFGRVGEVDEAINIFEELERSDCKPDIISYNSLINCLGKNGD 527

Query: 551 LDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNS 610
           +DEA   F EM+ K   PD   Y  L++ +GK   V  A+  +E ML  G +PN+ T N 
Sbjct: 528 VDEAHVRFKEMQEKGLNPDVVTYSTLMECFGKTERVEMAYSLFEEMLVKGCQPNIVTYNI 587

Query: 611 LLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLL 646
           LL    + G+ ++A  L   M   GL P   TYT+L
Sbjct: 588 LLDCLEKSGRTAEAVDLYTKMKQQGLTPDSITYTVL 623



 Score =  109 bits (272), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 58/217 (26%), Positives = 114/217 (52%), Gaps = 9/217 (4%)

Query: 295 GNVVESVSRILRQWKWGPLAEEALGNTNYSMDAYQANQVLKQLQDHTVALGFFNWLRRQA 354
           G  +E++  + +  + G + +  + NT +S         L +L+  +     F  +++  
Sbjct: 421 GKTIEAIEMLSKIHEKGVVTDTMMYNTVFS--------ALGKLKQISHIHDLFEKMKKD- 471

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           G   D  TY  ++   GR  +      + +++ R  C+P++++YN LI+  G+   ++EA
Sbjct: 472 GPSPDIFTYNILISSFGRVGEVDEAINIFEELERSDCKPDIISYNSLINCLGKNGDVDEA 531

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
              FK+MQ  G  PD VTY TL++   K   +++A  ++++M   G  P+  TY+++++C
Sbjct: 532 HVRFKEMQEKGLNPDVVTYSTLMECFGKTERVEMAYSLFEEMLVKGCQPNIVTYNILLDC 591

Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQA 511
           L K+G    A  L+ +M  QG  P+ +TY ++  LQ+
Sbjct: 592 LEKSGRTAEAVDLYTKMKQQGLTPDSITYTVLERLQS 628



 Score =  107 bits (267), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 105/471 (22%), Positives = 207/471 (43%), Gaps = 50/471 (10%)

Query: 316 EALGNTNYSMDAYQANQVLKQLQDHTVALGFFNWLRRQA-GFKHDEHTYTTMVGILGRAR 374
           + L +   S+   +A+++LK L    VA+ FF ++       ++D   Y  ++ IL R+ 
Sbjct: 88  DYLSSLTLSLTPDEASEILKSLNSPLVAVEFFKFVPSLCPNSQNDPFLYNRIILILSRSN 147

Query: 375 ---QFGAINKLLDQMVRD--------------------------------GCQPNVVTYN 399
              +F  +  +LD MV+                                 G + N  TY 
Sbjct: 148 LSDRFDRVRSILDSMVKSNVHGNISTVNILIGFFGDTEDLQMCLRLVKKWGLKMNSFTYK 207

Query: 400 RLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAA 459
            L+ +Y R+   ++A DV+ +++  G + D   Y  L+D  AK    + A  +++ M+  
Sbjct: 208 CLLQAYLRSRDSSKAFDVYCEIRRGGHKLDIFAYNMLLDALAKD---EKACQVFEDMKKR 264

Query: 460 GLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSA 519
               D ++Y+++I  +G+ G    A  LF EM+ +G   N+V YN ++ + AK +    A
Sbjct: 265 HCRRDEYSYTIMIRTMGRIGKYDEAVGLFNEMITEGLTLNVVGYNTLMQVLAKGKMVDKA 324

Query: 520 LKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDL 579
           ++++  M   G  P++ TYS+V+ +L   G L   + +    +R      + +Y  LV  
Sbjct: 325 IQVFSRMVETGCRPNEYTYSLVLNLLVAEGQLVRLDGIVEISKR---YMTQGIYSYLVRT 381

Query: 580 WGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPS 639
             K G+V +A   +  M    ++    +  S+L +    G+  +A  +L  +   G+   
Sbjct: 382 LSKLGHVSEAHRLFCDMWSFPVKGERDSYMSMLESLCGAGKTIEAIEMLSKIHEKGVVTD 441

Query: 640 LQTYTLLLSCCTEARSPYDMGFCHELMAVSGHPAHMFL--LSMPSPGPDGQNVRDHVGSF 697
              Y  + S   + +    +    E M   G    +F   + + S G  G+ V + +  F
Sbjct: 442 TMMYNTVFSALGKLKQISHIHDLFEKMKKDGPSPDIFTYNILISSFGRVGE-VDEAINIF 500

Query: 698 LEMMHSEDRESKRGLV--DAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAV 746
            E+   E  + K  ++  +++++ L K+G  +EA   ++   +K + PD V
Sbjct: 501 EEL---ERSDCKPDIISYNSLINCLGKNGDVDEAHVRFKEMQEKGLNPDVV 548


>gi|255573471|ref|XP_002527661.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223532966|gb|EEF34732.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 766

 Score =  162 bits (411), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 94/306 (30%), Positives = 158/306 (51%), Gaps = 1/306 (0%)

Query: 342 VALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRL 401
           ++L  F+ L  + G+KHD  +Y T++      R  G+  KL+ +M  +G  PN  T+NRL
Sbjct: 411 ISLSMFHNLGAE-GYKHDVISYNTLINGFVLQRDMGSACKLVHEMRMNGSVPNSFTFNRL 469

Query: 402 IHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGL 461
           IH + +   L++AL+VF  M  VG + +  T   + D   + G    A+ +  ++Q  G+
Sbjct: 470 IHGFCKRQRLDKALEVFTIMLKVGVQLNIFTCNIMADEFNREGHFWEALKLINEVQDLGI 529

Query: 462 SPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALK 521
            P+++TY+++I  L K    + A ++   M+     P  + YN +I   AK  N   AL 
Sbjct: 530 VPNSYTYNIVIKWLCKEQKTEKAWEVLPVMLKNNVFPCAIHYNTLIDGYAKQSNPTKALL 589

Query: 522 LYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWG 581
           LY  M   G  P  VTY++++ +  +   + EA  +F EM +K  VPDE ++  ++  + 
Sbjct: 590 LYAKMLKVGIPPSIVTYTMLINMFSNRSKMQEAYYLFKEMIKKGLVPDEIIFTCIIAGFC 649

Query: 582 KAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQ 641
           K G+++ AW  YE M Q G  PNV T   L+  + ++ ++  A  L   M    + P   
Sbjct: 650 KVGDMKSAWALYEEMSQWGKSPNVVTYTCLIDGYFKIKRMDKADFLFNKMKRDNVTPDGL 709

Query: 642 TYTLLL 647
           TYT L+
Sbjct: 710 TYTALI 715



 Score =  121 bits (303), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 82/311 (26%), Positives = 150/311 (48%), Gaps = 11/311 (3%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           R  G     ++Y+ ++  L +  Q      L+++MV+   +P++VTY+ L     ++   
Sbjct: 350 RSHGISPTAYSYSILIDGLCKKGQVEKALDLIEEMVQSNVKPSLVTYSSLFDGLCKSGLT 409

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
             +L +F  +   G + D ++Y TLI+       +  A  +  +M+  G  P++FT++ +
Sbjct: 410 EISLSMFHNLGAEGYKHDVISYNTLINGFVLQRDMGSACKLVHEMRMNGSVPNSFTFNRL 469

Query: 472 INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF 531
           I+   K   L  A ++F  M+  G   N+ T NIM     +  ++  ALKL  ++Q+ G 
Sbjct: 470 IHGFCKRQRLDKALEVFTIMLKVGVQLNIFTCNIMADEFNREGHFWEALKLINEVQDLGI 529

Query: 532 EPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWE 591
            P+  TY+IV++ L      ++A  V   M + N  P    Y  L+D + K  N  KA  
Sbjct: 530 VPNSYTYNIVIKWLCKEQKTEKAWEVLPVMLKNNVFPCAIHYNTLIDGYAKQSNPTKALL 589

Query: 592 WYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCT 651
            Y  ML+ G+ P++ T   L++ F    ++ +AY+L + M+  GL P    +T +++   
Sbjct: 590 LYAKMLKVGIPPSIVTYTMLINMFSNRSKMQEAYYLFKEMIKKGLVPDEIIFTCIIA--- 646

Query: 652 EARSPYDMGFC 662
                   GFC
Sbjct: 647 --------GFC 649



 Score =  105 bits (263), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 79/345 (22%), Positives = 154/345 (44%), Gaps = 41/345 (11%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANY- 410
           R+ G + +  +   ++     A Q   I  L +++   G  PNV TY  +++ Y + ++ 
Sbjct: 205 RRFGLELNILSCNFLLNCFAEANQTEFIRSLFEELKDSGPSPNVFTYTIMMNYYCKGSFG 264

Query: 411 ----LNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTF 466
               + +A +V ++M++ G  P  VTY   I    +AG ++ A+ + + ++      +++
Sbjct: 265 KNIDIVKATEVLEEMEMNGESPTVVTYGAYIHGLCRAGCVEFALRLIRDLRIRNQPLNSY 324

Query: 467 TYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDM 526
            Y+ +I+   + G L  A +L  +M + G  P   +Y+I+I    K    + AL L  +M
Sbjct: 325 CYNAVIHEFCRNGELHEAFELLEDMRSHGISPTAYSYSILIDGLCKKGQVEKALDLIEEM 384

Query: 527 QNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVF---------------------------- 558
             +  +P  VTYS + + L   G  + + ++F                            
Sbjct: 385 VQSNVKPSLVTYSSLFDGLCKSGLTEISLSMFHNLGAEGYKHDVISYNTLINGFVLQRDM 444

Query: 559 -------AEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSL 611
                   EMR    VP+   +  L+  + K   + KA E +  ML+ G++ N+ TCN +
Sbjct: 445 GSACKLVHEMRMNGSVPNSFTFNRLIHGFCKRQRLDKALEVFTIMLKVGVQLNIFTCNIM 504

Query: 612 LSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS-CCTEARS 655
              F R G   +A  L+  + +LG+ P+  TY +++   C E ++
Sbjct: 505 ADEFNREGHFWEALKLINEVQDLGIVPNSYTYNIVIKWLCKEQKT 549



 Score =  100 bits (248), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 62/222 (27%), Positives = 106/222 (47%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           G   + +TY  ++  L + ++     ++L  M+++   P  + YN LI  Y + +   +A
Sbjct: 528 GIVPNSYTYNIVIKWLCKEQKTEKAWEVLPVMLKNNVFPCAIHYNTLIDGYAKQSNPTKA 587

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
           L ++ +M  VG  P  VTY  LI++ +    +  A  ++K+M   GL PD   ++ II  
Sbjct: 588 LLLYAKMLKVGIPPSIVTYTMLINMFSNRSKMQEAYYLFKEMIKKGLVPDEIIFTCIIAG 647

Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPD 534
             K G +++A  L+ EM   G  PN+VTY  +I    K +    A  L+  M+     PD
Sbjct: 648 FCKVGDMKSAWALYEEMSQWGKSPNVVTYTCLIDGYFKIKRMDKADFLFNKMKRDNVTPD 707

Query: 535 KVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLL 576
            +TY+ ++      GY D    +F EM+     P+   Y  L
Sbjct: 708 GLTYTALIFGYQSLGYSDRVREMFNEMKENGVFPNYTAYATL 749



 Score = 97.1 bits (240), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 73/272 (26%), Positives = 130/272 (47%), Gaps = 8/272 (2%)

Query: 394 NVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMY 453
           +++  N LI  +   N L +A DVF Q +  G E + ++   L++  A+A   +    ++
Sbjct: 177 SIIVANVLIKVFAENNMLVDAADVFVQARRFGLELNILSCNFLLNCFAEANQTEFIRSLF 236

Query: 454 KKMQAAGLSPDTFTYSVIIN--CLGKAGH---LQAAHQLFCEMVNQGCIPNLVTYNIMIA 508
           ++++ +G SP+ FTY++++N  C G  G    +  A ++  EM   G  P +VTY   I 
Sbjct: 237 EELKDSGPSPNVFTYTIMMNYYCKGSFGKNIDIVKATEVLEEMEMNGESPTVVTYGAYIH 296

Query: 509 LQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVP 568
              +A   + AL+L RD++      +   Y+ V+      G L EA  +  +MR     P
Sbjct: 297 GLCRAGCVEFALRLIRDLRIRNQPLNSYCYNAVIHEFCRNGELHEAFELLEDMRSHGISP 356

Query: 569 DEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLL 628
               Y +L+D   K G V KA +  E M+Q+ ++P++ T +SL     + G    +  + 
Sbjct: 357 TAYSYSILIDGLCKKGQVEKALDLIEEMVQSNVKPSLVTYSSLFDGLCKSGLTEISLSMF 416

Query: 629 QGMLNLGLKPSLQTYTLLLSCCTEARSPYDMG 660
             +   G K  + +Y  L++     R   DMG
Sbjct: 417 HNLGAEGYKHDVISYNTLINGFVLQR---DMG 445



 Score = 91.7 bits (226), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 102/451 (22%), Positives = 196/451 (43%), Gaps = 38/451 (8%)

Query: 374 RQFGAINKLLD------QMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCE 427
           + F   N L+D      Q  R G + N+++ N L++ +  AN       +F++++  G  
Sbjct: 186 KVFAENNMLVDAADVFVQARRFGLELNILSCNFLLNCFAEANQTEFIRSLFEELKDSGPS 245

Query: 428 PDRVTYCTLIDIHAKAGF---LDV--AMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQ 482
           P+  TY  +++ + K  F   +D+  A ++ ++M+  G SP   TY   I+ L +AG ++
Sbjct: 246 PNVFTYTIMMNYYCKGSFGKNIDIVKATEVLEEMEMNGESPTVVTYGAYIHGLCRAGCVE 305

Query: 483 AAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVM 542
            A +L  ++  +    N   YN +I    +      A +L  DM++ G  P   +YSI++
Sbjct: 306 FALRLIRDLRIRNQPLNSYCYNAVIHEFCRNGELHEAFELLEDMRSHGISPTAYSYSILI 365

Query: 543 EVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLR 602
           + L   G +++A  +  EM + N  P    Y  L D   K+G    +   +  +   G +
Sbjct: 366 DGLCKKGQVEKALDLIEEMVQSNVKPSLVTYSSLFDGLCKSGLTEISLSMFHNLGAEGYK 425

Query: 603 PNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL-SCCTEARSPYDMGF 661
            +V + N+L++ F+    +  A  L+  M   G  P+  T+  L+   C   R    +  
Sbjct: 426 HDVISYNTLINGFVLQRDMGSACKLVHEMRMNGSVPNSFTFNRLIHGFCKRQRLDKALE- 484

Query: 662 CHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRESKRGLV------DA 715
              +M   G   ++F  ++ +   + +      G F E +   +     G+V      + 
Sbjct: 485 VFTIMLKVGVQLNIFTCNIMADEFNRE------GHFWEALKLINEVQDLGIVPNSYTYNI 538

Query: 716 VVDFLHKSGLKEEAGSVWEVAAQKNVYPDAVKEKGMSYWLINLHVMSDGTAVIALSRTLA 775
           V+ +L K    E+A  V  V  + NV+P A          I+ + + DG A  +      
Sbjct: 539 VIKWLCKEQKTEKAWEVLPVMLKNNVFPCA----------IHYNTLIDGYAKQSNPTKAL 588

Query: 776 WFRKQMLISGVGPSRID---IVTGWGRRSRV 803
               +ML  G+ PS +    ++  +  RS++
Sbjct: 589 LLYAKMLKVGIPPSIVTYTMLINMFSNRSKM 619


>gi|115466932|ref|NP_001057065.1| Os06g0199100 [Oryza sativa Japonica Group]
 gi|51091829|dbj|BAD36643.1| putative PPR protein [Oryza sativa Japonica Group]
 gi|113595105|dbj|BAF18979.1| Os06g0199100 [Oryza sativa Japonica Group]
          Length = 1283

 Score =  162 bits (410), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 91/313 (29%), Positives = 165/313 (52%), Gaps = 2/313 (0%)

Query: 361 HTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNE--ALDVF 418
             +  M+G+  R+ +F    +LLD M     +P++V++N LI++  ++  L    AL++ 
Sbjct: 62  QVFNAMMGVYARSGRFDDARQLLDAMRDQDIEPDLVSFNTLINARAKSGCLAAGVALELL 121

Query: 419 KQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKA 478
            +++  G  PD +TY TLI   ++   LD A+ ++++M A+   PD +TY+ +++  G+ 
Sbjct: 122 HEVRQAGLRPDAITYNTLISACSQGSNLDDAVAVFEEMIASECRPDLWTYNAMVSVHGRC 181

Query: 479 GHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTY 538
           G  Q A  +F E+V +G  P+ VTYN ++   AK  + +   ++  ++  AGF  D +TY
Sbjct: 182 GKAQEAELMFKELVEKGFQPDAVTYNSLLYAFAKEGDVERVERVCEELVKAGFRKDGITY 241

Query: 539 SIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQ 598
           + ++ + G  G LD A  ++ EMR     PD   Y +LVD  GK   + +A +  E M  
Sbjct: 242 NTMIHMYGKMGRLDLALGLYDEMRAIGCTPDAVTYTVLVDSLGKMDRISEAGKVLEEMAD 301

Query: 599 AGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYD 658
           AGL+P + T ++L+ A+ + G+  DA      M+  G+KP    Y ++L     +     
Sbjct: 302 AGLKPTLVTFSALICAYAKSGRQDDAERTFDRMVESGVKPDRLAYLVMLDVFARSDETRK 361

Query: 659 MGFCHELMAVSGH 671
           +   +  M   G+
Sbjct: 362 LMVLYRAMIKDGY 374



 Score =  145 bits (365), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 82/280 (29%), Positives = 141/280 (50%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           RQAG + D  TY T++    +         + ++M+   C+P++ TYN ++  +GR    
Sbjct: 125 RQAGLRPDAITYNTLISACSQGSNLDDAVAVFEEMIASECRPDLWTYNAMVSVHGRCGKA 184

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
            EA  +FK++   G +PD VTY +L+   AK G ++    + +++  AG   D  TY+ +
Sbjct: 185 QEAELMFKELVEKGFQPDAVTYNSLLYAFAKEGDVERVERVCEELVKAGFRKDGITYNTM 244

Query: 472 INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF 531
           I+  GK G L  A  L+ EM   GC P+ VTY +++    K      A K+  +M +AG 
Sbjct: 245 IHMYGKMGRLDLALGLYDEMRAIGCTPDAVTYTVLVDSLGKMDRISEAGKVLEEMADAGL 304

Query: 532 EPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWE 591
           +P  VT+S ++      G  D+AE  F  M      PD   Y +++D++ ++   RK   
Sbjct: 305 KPTLVTFSALICAYAKSGRQDDAERTFDRMVESGVKPDRLAYLVMLDVFARSDETRKLMV 364

Query: 592 WYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGM 631
            Y AM++ G +P+      LL+A  +  +  +   ++Q M
Sbjct: 365 LYRAMIKDGYKPDDGLYQVLLAALAKGNEHDEIEGVIQDM 404



 Score =  143 bits (361), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 79/265 (29%), Positives = 145/265 (54%), Gaps = 4/265 (1%)

Query: 393 PNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFL--DVAM 450
           P V  +N ++  Y R+   ++A  +   M+    EPD V++ TLI+  AK+G L   VA+
Sbjct: 59  PTVQVFNAMMGVYARSGRFDDARQLLDAMRDQDIEPDLVSFNTLINARAKSGCLAAGVAL 118

Query: 451 DMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQ 510
           ++  +++ AGL PD  TY+ +I+   +  +L  A  +F EM+   C P+L TYN M+++ 
Sbjct: 119 ELLHEVRQAGLRPDAITYNTLISACSQGSNLDDAVAVFEEMIASECRPDLWTYNAMVSVH 178

Query: 511 AKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDE 570
            +    Q A  +++++   GF+PD VTY+ ++      G ++  E V  E+ +  +  D 
Sbjct: 179 GRCGKAQEAELMFKELVEKGFQPDAVTYNSLLYAFAKEGDVERVERVCEELVKAGFRKDG 238

Query: 571 PVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQG 630
             Y  ++ ++GK G +  A   Y+ M   G  P+  T   L+ +  ++ ++S+A  +L+ 
Sbjct: 239 ITYNTMIHMYGKMGRLDLALGLYDEMRAIGCTPDAVTYTVLVDSLGKMDRISEAGKVLEE 298

Query: 631 MLNLGLKPSLQTYTLLLSCCTEARS 655
           M + GLKP+L T++ L+  C  A+S
Sbjct: 299 MADAGLKPTLVTFSALI--CAYAKS 321



 Score =  137 bits (344), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 78/272 (28%), Positives = 137/272 (50%)

Query: 377 GAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTL 436
           G   +LL ++ + G +P+ +TYN LI +  + + L++A+ VF++M    C PD  TY  +
Sbjct: 115 GVALELLHEVRQAGLRPDAITYNTLISACSQGSNLDDAVAVFEEMIASECRPDLWTYNAM 174

Query: 437 IDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGC 496
           + +H + G    A  M+K++   G  PD  TY+ ++    K G ++   ++  E+V  G 
Sbjct: 175 VSVHGRCGKAQEAELMFKELVEKGFQPDAVTYNSLLYAFAKEGDVERVERVCEELVKAGF 234

Query: 497 IPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEA 556
             + +TYN MI +  K      AL LY +M+  G  PD VTY+++++ LG    + EA  
Sbjct: 235 RKDGITYNTMIHMYGKMGRLDLALGLYDEMRAIGCTPDAVTYTVLVDSLGKMDRISEAGK 294

Query: 557 VFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFL 616
           V  EM      P    +  L+  + K+G    A   ++ M+++G++P+      +L  F 
Sbjct: 295 VLEEMADAGLKPTLVTFSALICAYAKSGRQDDAERTFDRMVESGVKPDRLAYLVMLDVFA 354

Query: 617 RVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
           R  +      L + M+  G KP    Y +LL+
Sbjct: 355 RSDETRKLMVLYRAMIKDGYKPDDGLYQVLLA 386



 Score =  132 bits (332), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 121/501 (24%), Positives = 209/501 (41%), Gaps = 51/501 (10%)

Query: 352  RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
            + AG+  + H Y  M+ +L   ++F  +  ++ +M   G +P++V  N L+  Y      
Sbjct: 719  KAAGYLPNMHLYRIMISLLCHNKRFRDVELMVAEMEGAGFKPDLVVLNTLLLMYTGTGNF 778

Query: 412  NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
            +  ++V+  +   G EPD  TY TLI ++++    +    +  +M   GL+P   +Y ++
Sbjct: 779  DRTIEVYHSILEAGLEPDEDTYNTLIVMYSRNFRPEEGFTLLYEMGKRGLTPKLESYKIL 838

Query: 472  INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF 531
            +   GKA   + A  LF EM  +G   N   Y++M+ +   ARN+  A  L   M+  G 
Sbjct: 839  LAASGKAKLWEQADLLFEEMRTKGYRLNRSIYHMMMKIYRNARNHSKAEHLLSAMKEDGI 898

Query: 532  EPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWE 591
            EP   T  I+M   G  G+ DEAE V   ++  N       Y  ++D + +  +      
Sbjct: 899  EPTIATMHILMTSYGTSGHPDEAEKVLNSLKSSNLEISTLPYSTVLDAYLRNRDYSLGIT 958

Query: 592  WYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCT 651
                M + G+ P+     S + A     Q  DA  LL+         SLQ          
Sbjct: 959  KLLEMKRDGVEPDHQVWTSFIRAASLCEQTDDAILLLK---------SLQ---------- 999

Query: 652  EARSPYDMGFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRESKRG 711
                  D GF   +  ++   + +F                 V SFLE + + +  +   
Sbjct: 1000 ------DCGFDLPIRLLTERTSSLF---------------TEVDSFLEKLGTLEDSASLN 1038

Query: 712  LVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAVKEKGMSYWLINLHVMSDGTAVIALS 771
             V+A+ D L     +  A  ++++A ++++Y   +       W  +L  +S G A++AL+
Sbjct: 1039 FVNALEDLLWAFERRATASWIFQLAVKRSIYHHNIFRVEEKDWGADLRKLSAGAALVALT 1098

Query: 772  RTLAWFRKQMLISGVG----PSRIDIVTGWGRRSRVTGTSLVRQAVQELLHMFSFPFFTE 827
                W  +    S  G    P  I +VTG G  + V+    +R+ ++  L     PF   
Sbjct: 1099 ---LWLDQMQDASLQGAPESPKSIVLVTGEGEYNMVS----LRKTIRAYLLEMGSPFLPC 1151

Query: 828  NGNSGCFVGCGEPLNKWLLQS 848
               SG FV     L  WL  S
Sbjct: 1152 RSRSGRFVVKAYSLKMWLKDS 1172



 Score =  115 bits (287), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 113/486 (23%), Positives = 205/486 (42%), Gaps = 95/486 (19%)

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
           + GF+ D  TY +++    +      + ++ +++V+ G + + +TYN +IH YG+   L+
Sbjct: 196 EKGFQPDAVTYNSLLYAFAKEGDVERVERVCEELVKAGFRKDGITYNTMIHMYGKMGRLD 255

Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
            AL ++ +M+ +GC PD VTY  L+D   K   +  A  + ++M  AGL P   T+S +I
Sbjct: 256 LALGLYDEMRAIGCTPDAVTYTVLVDSLGKMDRISEAGKVLEEMADAGLKPTLVTFSALI 315

Query: 473 NCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFE 532
               K+G    A + F  MV  G  P+ + Y +M+ + A++   +  + LYR M   G++
Sbjct: 316 CAYAKSGRQDDAERTFDRMVESGVKPDRLAYLVMLDVFARSDETRKLMVLYRAMIKDGYK 375

Query: 533 PDKVTYSIVMEVLGHC-------GYLDEAEAVF-------------AE--------MRR- 563
           PD   Y +++  L          G + + EAVF             AE        ++R 
Sbjct: 376 PDDGLYQVLLAALAKGNEHDEIEGVIQDMEAVFEMNPLVISSILIKAECISQGASLLKRA 435

Query: 564 --KNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSA------- 614
             + + PD      ++D + K G   K     E      +R +VP  ++L+S        
Sbjct: 436 CLQGYEPDGKSLLSILDAYEKMGKHEKGLSLLE-----WIRQHVPNSHNLISECSIMLLC 490

Query: 615 ----------------FLR---VGQLSDAYHLLQGMLN-----------------LGLKP 638
                            L+    GQ  D Y  L   L                  LG+ P
Sbjct: 491 KNGKIVDAIQEYSRKQMLKRGSFGQDCDLYEYLITYLEEAELFPEACQVFCDMQFLGIVP 550

Query: 639 SLQTY-TLLLSCCTEARSPYDMGF---CHELM---AVSGHPAHMFLLSMPSPGPDGQ-NV 690
           S + Y +++ +CC        +GF    ++LM   A S    ++    +      G+  +
Sbjct: 551 SQKIYQSIIYTCCR-------LGFPETAYQLMDDAARSDISLNILSCRVAMIEAYGKLKL 603

Query: 691 RDHVGSFLEMMHSEDRESKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAVKEKG 750
                +F++ +  E    +R + +A++    +SGL E A +++++  +K   P      G
Sbjct: 604 WQQAENFVKGLKQESGVDRR-IWNALIHAYAESGLYEHARAIFDIMIKKGPLPTVESVNG 662

Query: 751 MSYWLI 756
           M   LI
Sbjct: 663 MMRALI 668



 Score =  112 bits (280), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 69/245 (28%), Positives = 124/245 (50%), Gaps = 2/245 (0%)

Query: 428 PDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQA--AH 485
           P    +  ++ ++A++G  D A  +   M+   + PD  +++ +IN   K+G L A  A 
Sbjct: 59  PTVQVFNAMMGVYARSGRFDDARQLLDAMRDQDIEPDLVSFNTLINARAKSGCLAAGVAL 118

Query: 486 QLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVL 545
           +L  E+   G  P+ +TYN +I+  ++  N   A+ ++ +M  +   PD  TY+ ++ V 
Sbjct: 119 ELLHEVRQAGLRPDAITYNTLISACSQGSNLDDAVAVFEEMIASECRPDLWTYNAMVSVH 178

Query: 546 GHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNV 605
           G CG   EAE +F E+  K + PD   Y  L+  + K G+V +     E +++AG R + 
Sbjct: 179 GRCGKAQEAELMFKELVEKGFQPDAVTYNSLLYAFAKEGDVERVERVCEELVKAGFRKDG 238

Query: 606 PTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGFCHEL 665
            T N+++  + ++G+L  A  L   M  +G  P   TYT+L+    +     + G   E 
Sbjct: 239 ITYNTMIHMYGKMGRLDLALGLYDEMRAIGCTPDAVTYTVLVDSLGKMDRISEAGKVLEE 298

Query: 666 MAVSG 670
           MA +G
Sbjct: 299 MADAG 303



 Score = 97.1 bits (240), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 75/293 (25%), Positives = 137/293 (46%), Gaps = 4/293 (1%)

Query: 381 KLLDQMVRDGCQPNVVTYN-RLIHSYGRANYLNEALDVFKQM-QVVGCEPDRVTYCTLID 438
           +L+D   R     N+++    +I +YG+     +A +  K + Q  G   DR  +  LI 
Sbjct: 573 QLMDDAARSDISLNILSCRVAMIEAYGKLKLWQQAENFVKGLKQESGV--DRRIWNALIH 630

Query: 439 IHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIP 498
            +A++G  + A  ++  M   G  P   + + ++  L   G L   + +  E+ +     
Sbjct: 631 AYAESGLYEHARAIFDIMIKKGPLPTVESVNGMMRALIVDGRLDELYVVVQELQDLDIKI 690

Query: 499 NLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVF 558
           +  T  +M+   AKA +    +K+Y  M+ AG+ P+   Y I++ +L H     + E + 
Sbjct: 691 SKSTVLLMLEAFAKAGDVFEVMKIYNGMKAAGYLPNMHLYRIMISLLCHNKRFRDVELMV 750

Query: 559 AEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRV 618
           AEM    + PD  V   L+ ++   GN  +  E Y ++L+AGL P+  T N+L+  + R 
Sbjct: 751 AEMEGAGFKPDLVVLNTLLLMYTGTGNFDRTIEVYHSILEAGLEPDEDTYNTLIVMYSRN 810

Query: 619 GQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGFCHELMAVSGH 671
            +  + + LL  M   GL P L++Y +LL+   +A+         E M   G+
Sbjct: 811 FRPEEGFTLLYEMGKRGLTPKLESYKILLAASGKAKLWEQADLLFEEMRTKGY 863



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 56/258 (21%), Positives = 109/258 (42%)

Query: 398 YNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQ 457
           +N LIH+Y  +     A  +F  M   G  P   +   ++      G LD    + +++Q
Sbjct: 625 WNALIHAYAESGLYEHARAIFDIMIKKGPLPTVESVNGMMRALIVDGRLDELYVVVQELQ 684

Query: 458 AAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQ 517
              +     T  +++    KAG +    +++  M   G +PN+  Y IMI+L    + ++
Sbjct: 685 DLDIKISKSTVLLMLEAFAKAGDVFEVMKIYNGMKAAGYLPNMHLYRIMISLLCHNKRFR 744

Query: 518 SALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLV 577
               +  +M+ AGF+PD V  + ++ +    G  D    V+  +      PDE  Y  L+
Sbjct: 745 DVELMVAEMEGAGFKPDLVVLNTLLLMYTGTGNFDRTIEVYHSILEAGLEPDEDTYNTLI 804

Query: 578 DLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLK 637
            ++ +     + +     M + GL P + +   LL+A  +      A  L + M   G +
Sbjct: 805 VMYSRNFRPEEGFTLLYEMGKRGLTPKLESYKILLAASGKAKLWEQADLLFEEMRTKGYR 864

Query: 638 PSLQTYTLLLSCCTEARS 655
            +   Y +++     AR+
Sbjct: 865 LNRSIYHMMMKIYRNARN 882



 Score = 74.3 bits (181), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 75/395 (18%), Positives = 154/395 (38%), Gaps = 71/395 (17%)

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
           ++G K D   Y  M+ +  R+ +   +  L   M++DG +P+   Y  L+ +  + N  +
Sbjct: 336 ESGVKPDRLAYLVMLDVFARSDETRKLMVLYRAMIKDGYKPDDGLYQVLLAALAKGNEHD 395

Query: 413 EALDVFKQMQVV-------------------------------GCEPDRVTYCTLIDIHA 441
           E   V + M+ V                               G EPD  +  +++D + 
Sbjct: 396 EIEGVIQDMEAVFEMNPLVISSILIKAECISQGASLLKRACLQGYEPDGKSLLSILDAYE 455

Query: 442 KAG------------------------------------FLDVAMDMYKK--MQAAGLSP 463
           K G                                     +D   +  +K  ++      
Sbjct: 456 KMGKHEKGLSLLEWIRQHVPNSHNLISECSIMLLCKNGKIVDAIQEYSRKQMLKRGSFGQ 515

Query: 464 DTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLY 523
           D   Y  +I  L +A     A Q+FC+M   G +P+   Y  +I    +    ++A +L 
Sbjct: 516 DCDLYEYLITYLEEAELFPEACQVFCDMQFLGIVPSQKIYQSIIYTCCRLGFPETAYQLM 575

Query: 524 RDMQNAGFEPDKVTYSIVM-EVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGK 582
            D   +    + ++  + M E  G      +AE     +++++ V D  ++  L+  + +
Sbjct: 576 DDAARSDISLNILSCRVAMIEAYGKLKLWQQAENFVKGLKQESGV-DRRIWNALIHAYAE 634

Query: 583 AGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQT 642
           +G    A   ++ M++ G  P V + N ++ A +  G+L + Y ++Q + +L +K S  T
Sbjct: 635 SGLYEHARAIFDIMIKKGPLPTVESVNGMMRALIVDGRLDELYVVVQELQDLDIKISKST 694

Query: 643 YTLLLSCCTEARSPYDMGFCHELMAVSGHPAHMFL 677
             L+L    +A   +++   +  M  +G+  +M L
Sbjct: 695 VLLMLEAFAKAGDVFEVMKIYNGMKAAGYLPNMHL 729



 Score = 50.4 bits (119), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 41/156 (26%), Positives = 69/156 (44%), Gaps = 8/156 (5%)

Query: 603 PNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL-----SCCTEARSPY 657
           P V   N+++  + R G+  DA  LL  M +  ++P L ++  L+     S C  A    
Sbjct: 59  PTVQVFNAMMGVYARSGRFDDARQLLDAMRDQDIEPDLVSFNTLINARAKSGCLAAGVAL 118

Query: 658 DMGFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRESKRGLVDAVV 717
           ++   HE+      P  +   ++ S    G N+ D V  F EM+ SE R       +A+V
Sbjct: 119 EL--LHEVRQAGLRPDAITYNTLISACSQGSNLDDAVAVFEEMIASECR-PDLWTYNAMV 175

Query: 718 DFLHKSGLKEEAGSVWEVAAQKNVYPDAVKEKGMSY 753
               + G  +EA  +++   +K   PDAV    + Y
Sbjct: 176 SVHGRCGKAQEAELMFKELVEKGFQPDAVTYNSLLY 211


>gi|22330179|ref|NP_683419.1| ABA Overly-Sensitive 5 protein [Arabidopsis thaliana]
 gi|75216707|sp|Q9ZU27.1|PPR76_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g51965, mitochondrial; Flags: Precursor
 gi|4220445|gb|AAD12672.1| Similar to gi|3004555 F19F24.14 salt inducible protein homolog from
           Arabidopsis thaliana BAC gb|AC003673 [Arabidopsis
           thaliana]
 gi|332194619|gb|AEE32740.1| ABA Overly-Sensitive 5 protein [Arabidopsis thaliana]
          Length = 650

 Score =  162 bits (410), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 99/365 (27%), Positives = 173/365 (47%), Gaps = 45/365 (12%)

Query: 323 YSMDAYQANQVLKQLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKL 382
           + +D +  N +L  L     A   F  ++++   + DE+TYT M+  +GR  +      L
Sbjct: 234 HKLDIFAYNMLLDALAKDEKACQVFEDMKKRHC-RRDEYTYTIMIRTMGRIGKCDEAVGL 292

Query: 383 LDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAK 442
            ++M+ +G   NVV YN L+    +   +++A+ VF +M   GC P+  TY  L+++   
Sbjct: 293 FNEMITEGLTLNVVGYNTLMQVLAKGKMVDKAIQVFSRMVETGCRPNEYTYSLLLNLLVA 352

Query: 443 AG---FLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVN------ 493
            G    LD  +++ K+    G+      YS ++  L K GH+  AH+LFC+M +      
Sbjct: 353 EGQLVRLDGVVEISKRYMTQGI------YSYLVRTLSKLGHVSEAHRLFCDMWSFPVKGE 406

Query: 494 -----------------------------QGCIPNLVTYNIMIALQAKARNYQSALKLYR 524
                                        +G + + + YN + +   K +       L+ 
Sbjct: 407 RDSYMSMLESLCGAGKTIEAIEMLSKIHEKGVVTDTMMYNTVFSALGKLKQISHIHDLFE 466

Query: 525 DMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAG 584
            M+  G  PD  TY+I++   G  G +DEA  +F E+ R +  PD   Y  L++  GK G
Sbjct: 467 KMKKDGPSPDIFTYNILIASFGRVGEVDEAINIFEELERSDCKPDIISYNSLINCLGKNG 526

Query: 585 NVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYT 644
           +V +A   ++ M + GL P+V T ++L+  F +  ++  AY L + ML  G +P++ TY 
Sbjct: 527 DVDEAHVRFKEMQEKGLNPDVVTYSTLMECFGKTERVEMAYSLFEEMLVKGCQPNIVTYN 586

Query: 645 LLLSC 649
           +LL C
Sbjct: 587 ILLDC 591



 Score =  155 bits (393), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 71/189 (37%), Positives = 116/189 (61%)

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
           + G   D   Y T+   LG+ +Q   I+ L ++M +DG  P++ TYN LI S+GR   ++
Sbjct: 435 EKGVVTDTMMYNTVFSALGKLKQISHIHDLFEKMKKDGPSPDIFTYNILIASFGRVGEVD 494

Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
           EA+++F++++   C+PD ++Y +LI+   K G +D A   +K+MQ  GL+PD  TYS ++
Sbjct: 495 EAINIFEELERSDCKPDIISYNSLINCLGKNGDVDEAHVRFKEMQEKGLNPDVVTYSTLM 554

Query: 473 NCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFE 532
            C GK   ++ A+ LF EM+ +GC PN+VTYNI++    K      A+ LY  M+  G  
Sbjct: 555 ECFGKTERVEMAYSLFEEMLVKGCQPNIVTYNILLDCLEKNGRTAEAVDLYSKMKQQGLT 614

Query: 533 PDKVTYSIV 541
           PD +TY+++
Sbjct: 615 PDSITYTVL 623



 Score =  147 bits (370), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 93/336 (27%), Positives = 160/336 (47%), Gaps = 33/336 (9%)

Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRL- 401
           A+G FN +  + G   +   Y T++ +L + +      ++  +MV  GC+PN  TY+ L 
Sbjct: 289 AVGLFNEMITE-GLTLNVVGYNTLMQVLAKGKMVDKAIQVFSRMVETGCRPNEYTYSLLL 347

Query: 402 --------------------------IHSY-----GRANYLNEALDVFKQMQVVGCEPDR 430
                                     I+SY      +  +++EA  +F  M     + +R
Sbjct: 348 NLLVAEGQLVRLDGVVEISKRYMTQGIYSYLVRTLSKLGHVSEAHRLFCDMWSFPVKGER 407

Query: 431 VTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCE 490
            +Y ++++    AG    A++M  K+   G+  DT  Y+ + + LGK   +   H LF +
Sbjct: 408 DSYMSMLESLCGAGKTIEAIEMLSKIHEKGVVTDTMMYNTVFSALGKLKQISHIHDLFEK 467

Query: 491 MVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGY 550
           M   G  P++ TYNI+IA   +      A+ ++ +++ +  +PD ++Y+ ++  LG  G 
Sbjct: 468 MKKDGPSPDIFTYNILIASFGRVGEVDEAINIFEELERSDCKPDIISYNSLINCLGKNGD 527

Query: 551 LDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNS 610
           +DEA   F EM+ K   PD   Y  L++ +GK   V  A+  +E ML  G +PN+ T N 
Sbjct: 528 VDEAHVRFKEMQEKGLNPDVVTYSTLMECFGKTERVEMAYSLFEEMLVKGCQPNIVTYNI 587

Query: 611 LLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLL 646
           LL    + G+ ++A  L   M   GL P   TYT+L
Sbjct: 588 LLDCLEKNGRTAEAVDLYSKMKQQGLTPDSITYTVL 623



 Score =  108 bits (269), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 58/217 (26%), Positives = 113/217 (52%), Gaps = 9/217 (4%)

Query: 295 GNVVESVSRILRQWKWGPLAEEALGNTNYSMDAYQANQVLKQLQDHTVALGFFNWLRRQA 354
           G  +E++  + +  + G + +  + NT +S         L +L+  +     F  +++  
Sbjct: 421 GKTIEAIEMLSKIHEKGVVTDTMMYNTVFS--------ALGKLKQISHIHDLFEKMKKD- 471

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           G   D  TY  ++   GR  +      + +++ R  C+P++++YN LI+  G+   ++EA
Sbjct: 472 GPSPDIFTYNILIASFGRVGEVDEAINIFEELERSDCKPDIISYNSLINCLGKNGDVDEA 531

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
              FK+MQ  G  PD VTY TL++   K   +++A  ++++M   G  P+  TY+++++C
Sbjct: 532 HVRFKEMQEKGLNPDVVTYSTLMECFGKTERVEMAYSLFEEMLVKGCQPNIVTYNILLDC 591

Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQA 511
           L K G    A  L+ +M  QG  P+ +TY ++  LQ+
Sbjct: 592 LEKNGRTAEAVDLYSKMKQQGLTPDSITYTVLERLQS 628



 Score =  105 bits (263), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 102/458 (22%), Positives = 201/458 (43%), Gaps = 50/458 (10%)

Query: 329 QANQVLKQLQDHTVALGFFNWLRRQAGF-KHDEHTYTTMVGILGRAR---QFGAINKLLD 384
           +A+++LK L    +A+ FF  +     + ++D   Y  ++ IL R+    +F  +  +LD
Sbjct: 101 EASEILKSLNSPLLAVEFFKLVPSLCPYSQNDPFLYNRIILILSRSNLPDRFDRVRSILD 160

Query: 385 QMVRDGCQPNV--------------------------------VTYNRLIHSYGRANYLN 412
            MV+     N+                                 TY  L+ +Y R+   +
Sbjct: 161 SMVKSNVHGNISTVNILIGFFGNTEDLQMCLRLVKKWDLKMNSFTYKCLLQAYLRSRDYS 220

Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
           +A DV+ +++  G + D   Y  L+D  AK    + A  +++ M+      D +TY+++I
Sbjct: 221 KAFDVYCEIRRGGHKLDIFAYNMLLDALAKD---EKACQVFEDMKKRHCRRDEYTYTIMI 277

Query: 473 NCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFE 532
             +G+ G    A  LF EM+ +G   N+V YN ++ + AK +    A++++  M   G  
Sbjct: 278 RTMGRIGKCDEAVGLFNEMITEGLTLNVVGYNTLMQVLAKGKMVDKAIQVFSRMVETGCR 337

Query: 533 PDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEW 592
           P++ TYS+++ +L   G L   + V    +R      + +Y  LV    K G+V +A   
Sbjct: 338 PNEYTYSLLLNLLVAEGQLVRLDGVVEISKR---YMTQGIYSYLVRTLSKLGHVSEAHRL 394

Query: 593 YEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTE 652
           +  M    ++    +  S+L +    G+  +A  +L  +   G+      Y  + S   +
Sbjct: 395 FCDMWSFPVKGERDSYMSMLESLCGAGKTIEAIEMLSKIHEKGVVTDTMMYNTVFSALGK 454

Query: 653 ARSPYDMGFCHELMAVSGHPAHMFL--LSMPSPGPDGQNVRDHVGSFLEMMHSEDRESKR 710
            +    +    E M   G    +F   + + S G  G+ V + +  F E+   E  + K 
Sbjct: 455 LKQISHIHDLFEKMKKDGPSPDIFTYNILIASFGRVGE-VDEAINIFEEL---ERSDCKP 510

Query: 711 GLV--DAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAV 746
            ++  +++++ L K+G  +EA   ++   +K + PD V
Sbjct: 511 DIISYNSLINCLGKNGDVDEAHVRFKEMQEKGLNPDVV 548


>gi|224092336|ref|XP_002309564.1| predicted protein [Populus trichocarpa]
 gi|222855540|gb|EEE93087.1| predicted protein [Populus trichocarpa]
          Length = 593

 Score =  162 bits (410), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 103/335 (30%), Positives = 159/335 (47%), Gaps = 36/335 (10%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           G + D +TYTT++  L +  +  A   LL +M   GCQPNVVTY+ +I S+ +   +NEA
Sbjct: 198 GCRPDVYTYTTIINGLCKIGETAAAAGLLKKMEEAGCQPNVVTYSTIIDSHRKDRRVNEA 257

Query: 415 LDVFKQMQVVGCEPDRVTYCTLI-----------------------------------DI 439
           LD+F  M+V G  PD  TY +LI                                   D 
Sbjct: 258 LDIFSYMKVKGISPDIFTYNSLIQGLCNFSQWKEASALLNEMRSLNIMPDIVTFNVLVDT 317

Query: 440 HAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPN 499
             K G +  A  + K M   G+ PD  TYS ++        +  A +LF  M+ +GC P+
Sbjct: 318 ICKEGKVSEAQGVLKTMTEMGVEPDVVTYSSLMYGYSLRSEVVEARKLFDAMITKGCKPD 377

Query: 500 LVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFA 559
           + +YNI+I    K +    A +L+ +M + G  P+ V+Y+ ++  L   G L EA  +F 
Sbjct: 378 VFSYNILINGYCKVKRIDEAKQLFNEMIHQGLTPNNVSYNTLIHGLCQLGSLREARNLFK 437

Query: 560 EMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVG 619
            M     +P+   Y +L+D + K G   KA+  + AM     +PN+   N L+ A  + G
Sbjct: 438 NMHTNGNLPNLFTYSILLDGFCKQGYFGKAFRLFRAMQSTYSKPNLVMYNILIDAMCKSG 497

Query: 620 QLSDAYHLLQGMLNLGLKPSLQTYTLLLS-CCTEA 653
            L DA  L   +   GL+P+ Q YT +++  C E 
Sbjct: 498 NLRDARKLFSELFVKGLQPNAQIYTTIINGLCKEG 532



 Score =  154 bits (390), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 99/320 (30%), Positives = 157/320 (49%), Gaps = 9/320 (2%)

Query: 338 QDHTVALGFFNWLRRQAGFKHDEH--------TYTTMV-GILGRARQFGAINKLLDQMVR 388
           + H  A  F N     A F H  H         +T ++  I+   + +  +  L  QM  
Sbjct: 67  RKHDDACSFRNIDDALASFNHMLHRKPLPCIIQFTKLLSAIVKMGQYYDTVISLTKQMEL 126

Query: 389 DGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDV 448
            G  PN+ T + LI+ +     ++ A  V  ++  +G +P  VT+ TLI+   K G    
Sbjct: 127 AGLSPNIYTLSILINCFSHLQRVDLAFSVLAKIIKLGLQPTIVTFTTLINWLCKVGKFAQ 186

Query: 449 AMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIA 508
           AM+++  M A G  PD +TY+ IIN L K G   AA  L  +M   GC PN+VTY+ +I 
Sbjct: 187 AMELFDDMVARGCRPDVYTYTTIINGLCKIGETAAAAGLLKKMEEAGCQPNVVTYSTIID 246

Query: 509 LQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVP 568
              K R    AL ++  M+  G  PD  TY+ +++ L +     EA A+  EMR  N +P
Sbjct: 247 SHRKDRRVNEALDIFSYMKVKGISPDIFTYNSLIQGLCNFSQWKEASALLNEMRSLNIMP 306

Query: 569 DEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLL 628
           D   + +LVD   K G V +A    + M + G+ P+V T +SL+  +    ++ +A  L 
Sbjct: 307 DIVTFNVLVDTICKEGKVSEAQGVLKTMTEMGVEPDVVTYSSLMYGYSLRSEVVEARKLF 366

Query: 629 QGMLNLGLKPSLQTYTLLLS 648
             M+  G KP + +Y +L++
Sbjct: 367 DAMITKGCKPDVFSYNILIN 386



 Score =  151 bits (381), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 88/305 (28%), Positives = 159/305 (52%), Gaps = 1/305 (0%)

Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLI 402
           AL  F++++ + G   D  TY +++  L    Q+   + LL++M      P++VT+N L+
Sbjct: 257 ALDIFSYMKVK-GISPDIFTYNSLIQGLCNFSQWKEASALLNEMRSLNIMPDIVTFNVLV 315

Query: 403 HSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLS 462
            +  +   ++EA  V K M  +G EPD VTY +L+  ++    +  A  ++  M   G  
Sbjct: 316 DTICKEGKVSEAQGVLKTMTEMGVEPDVVTYSSLMYGYSLRSEVVEARKLFDAMITKGCK 375

Query: 463 PDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKL 522
           PD F+Y+++IN   K   +  A QLF EM++QG  PN V+YN +I    +  + + A  L
Sbjct: 376 PDVFSYNILINGYCKVKRIDEAKQLFNEMIHQGLTPNNVSYNTLIHGLCQLGSLREARNL 435

Query: 523 YRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGK 582
           +++M   G  P+  TYSI+++     GY  +A  +F  M+     P+  +Y +L+D   K
Sbjct: 436 FKNMHTNGNLPNLFTYSILLDGFCKQGYFGKAFRLFRAMQSTYSKPNLVMYNILIDAMCK 495

Query: 583 AGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQT 642
           +GN+R A + +  +   GL+PN     ++++   + G L +A    + M   G  P   +
Sbjct: 496 SGNLRDARKLFSELFVKGLQPNAQIYTTIINGLCKEGLLDEALEAFRNMEEDGCPPDEIS 555

Query: 643 YTLLL 647
           Y +++
Sbjct: 556 YNVII 560



 Score =  145 bits (365), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 97/392 (24%), Positives = 184/392 (46%)

Query: 354 AGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNE 413
           AG   + +T + ++      ++      +L ++++ G QP +VT+  LI+   +     +
Sbjct: 127 AGLSPNIYTLSILINCFSHLQRVDLAFSVLAKIIKLGLQPTIVTFTTLINWLCKVGKFAQ 186

Query: 414 ALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIIN 473
           A+++F  M   GC PD  TY T+I+   K G    A  + KKM+ AG  P+  TYS II+
Sbjct: 187 AMELFDDMVARGCRPDVYTYTTIINGLCKIGETAAAAGLLKKMEEAGCQPNVVTYSTIID 246

Query: 474 CLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEP 533
              K   +  A  +F  M  +G  P++ TYN +I        ++ A  L  +M++    P
Sbjct: 247 SHRKDRRVNEALDIFSYMKVKGISPDIFTYNSLIQGLCNFSQWKEASALLNEMRSLNIMP 306

Query: 534 DKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWY 593
           D VT++++++ +   G + EA+ V   M      PD   Y  L+  +     V +A + +
Sbjct: 307 DIVTFNVLVDTICKEGKVSEAQGVLKTMTEMGVEPDVVTYSSLMYGYSLRSEVVEARKLF 366

Query: 594 EAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEA 653
           +AM+  G +P+V + N L++ + +V ++ +A  L   M++ GL P+  +Y  L+    + 
Sbjct: 367 DAMITKGCKPDVFSYNILINGYCKVKRIDEAKQLFNEMIHQGLTPNNVSYNTLIHGLCQL 426

Query: 654 RSPYDMGFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRESKRGLV 713
            S  +     + M  +G+  ++F  S+   G   Q            M S   +    + 
Sbjct: 427 GSLREARNLFKNMHTNGNLPNLFTYSILLDGFCKQGYFGKAFRLFRAMQSTYSKPNLVMY 486

Query: 714 DAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDA 745
           + ++D + KSG   +A  ++     K + P+A
Sbjct: 487 NILIDAMCKSGNLRDARKLFSELFVKGLQPNA 518



 Score =  135 bits (340), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 82/291 (28%), Positives = 147/291 (50%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           R      D  T+  +V  + +  +      +L  M   G +P+VVTY+ L++ Y   + +
Sbjct: 300 RSLNIMPDIVTFNVLVDTICKEGKVSEAQGVLKTMTEMGVEPDVVTYSSLMYGYSLRSEV 359

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
            EA  +F  M   GC+PD  +Y  LI+ + K   +D A  ++ +M   GL+P+  +Y+ +
Sbjct: 360 VEARKLFDAMITKGCKPDVFSYNILINGYCKVKRIDEAKQLFNEMIHQGLTPNNVSYNTL 419

Query: 472 INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF 531
           I+ L + G L+ A  LF  M   G +PNL TY+I++    K   +  A +L+R MQ+   
Sbjct: 420 IHGLCQLGSLREARNLFKNMHTNGNLPNLFTYSILLDGFCKQGYFGKAFRLFRAMQSTYS 479

Query: 532 EPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWE 591
           +P+ V Y+I+++ +   G L +A  +F+E+  K   P+  +Y  +++   K G + +A E
Sbjct: 480 KPNLVMYNILIDAMCKSGNLRDARKLFSELFVKGLQPNAQIYTTIINGLCKEGLLDEALE 539

Query: 592 WYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQT 642
            +  M + G  P+  + N ++  FL     S A  L+  M + G    + T
Sbjct: 540 AFRNMEEDGCPPDEISYNVIIRGFLHHKDESRAVQLIGEMRDKGFIADVGT 590



 Score = 83.2 bits (204), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 60/267 (22%), Positives = 119/267 (44%), Gaps = 1/267 (0%)

Query: 488 FCEMVNQGCIPNLVTYNIMI-ALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLG 546
           F  M+++  +P ++ +  ++ A+    + Y + + L + M+ AG  P+  T SI++    
Sbjct: 85  FNHMLHRKPLPCIIQFTKLLSAIVKMGQYYDTVISLTKQMELAGLSPNIYTLSILINCFS 144

Query: 547 HCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVP 606
           H   +D A +V A++ +    P    +  L++   K G   +A E ++ M+  G RP+V 
Sbjct: 145 HLQRVDLAFSVLAKIIKLGLQPTIVTFTTLINWLCKVGKFAQAMELFDDMVARGCRPDVY 204

Query: 607 TCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGFCHELM 666
           T  ++++   ++G+ + A  LL+ M   G +P++ TY+ ++    + R   +       M
Sbjct: 205 TYTTIINGLCKIGETAAAAGLLKKMEEAGCQPNVVTYSTIIDSHRKDRRVNEALDIFSYM 264

Query: 667 AVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRESKRGLVDAVVDFLHKSGLK 726
            V G    +F  +    G    +      + L  M S +        + +VD + K G  
Sbjct: 265 KVKGISPDIFTYNSLIQGLCNFSQWKEASALLNEMRSLNIMPDIVTFNVLVDTICKEGKV 324

Query: 727 EEAGSVWEVAAQKNVYPDAVKEKGMSY 753
            EA  V +   +  V PD V    + Y
Sbjct: 325 SEAQGVLKTMTEMGVEPDVVTYSSLMY 351


>gi|242067235|ref|XP_002448894.1| hypothetical protein SORBIDRAFT_05g000986 [Sorghum bicolor]
 gi|241934737|gb|EES07882.1| hypothetical protein SORBIDRAFT_05g000986 [Sorghum bicolor]
          Length = 796

 Score =  162 bits (410), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 108/411 (26%), Positives = 191/411 (46%), Gaps = 5/411 (1%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           G + D  TY  ++  L +  +     KL D M+R G +P+V  Y  ++H Y     L+E 
Sbjct: 304 GLEPDCFTYGLLLDYLCKKGKCTEARKLFDSMIRKGIKPDVSIYGIILHGYATKGALSEM 363

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
                 M   G  P+   +  +    AK   +  AMD++ KM+  GLSP+   Y+ +I+ 
Sbjct: 364 HSFLDLMVGNGISPNHYIFNIVFCAFAKKAMIGEAMDIFNKMRQQGLSPNVVNYATLIDA 423

Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPD 534
           L K G +  A   F +M+N+G  PN+V +  ++        ++ A +L+ +M N G  P+
Sbjct: 424 LCKLGRVDDAELKFNQMINEGVAPNIVVFTSLVYGLCTIDKWEKAGELFFEMVNQGIHPN 483

Query: 535 KVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYE 594
            V ++ +M  L   G + +A+ +   M R    PD   Y  L+      G   +A +  +
Sbjct: 484 VVFFNTIMCNLCTEGRVMKAQRLIDLMERVGTRPDIISYNALIRGHCLVGKTDEASKLLD 543

Query: 595 AMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEAR 654
            ML  GL+PN  T N+LL  + R G++ DAY + Q ML+ G+ P + TY  +L    + R
Sbjct: 544 IMLSVGLKPNECTYNTLLHGYCRDGRIDDAYSVFQEMLSNGITPVVVTYNTILHGLFKTR 603

Query: 655 SPYDMGFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRESKRGLVD 714
              +    +  M  SG    ++  ++   G    N  D      + + S+D +      +
Sbjct: 604 RFSEAKELYLNMITSGKQWSIYTYNIILNGLSKNNCVDEALKMFQSLCSKDLQVDIITFN 663

Query: 715 AVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAVKEKGMSYWLINLHVMSDGT 765
            ++  L K G KE+A +++   +   + PD       +Y LI  +++ +G+
Sbjct: 664 IMIGALLKDGRKEDAMNLFATISANGLVPDVT-----TYRLIAENLIEEGS 709



 Score =  149 bits (376), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 88/290 (30%), Positives = 151/290 (52%), Gaps = 5/290 (1%)

Query: 370 LGRARQFG-AINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQM---QVVG 425
           L  A++ G A+  LL +M   GC PNVV+YN L+  +   N   EAL++   M   QV  
Sbjct: 140 LCDAKRVGEAMGVLLRRMSELGCTPNVVSYNTLLKGFCDENRAEEALELLHMMADGQVRS 199

Query: 426 CEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAH 485
           C P+ V+Y T+I+     G +D A +++  M   G+ P+  TY+++I+ L KA  +  A 
Sbjct: 200 CPPNLVSYNTVINGFFTEGQVDKAYNLFLDMTDQGIPPNVVTYTIVIDGLCKAQVVDRAE 259

Query: 486 QLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVL 545
            +F +M+++G  PN+VTY  +I        ++  +++ ++M   G EPD  TY ++++ L
Sbjct: 260 GVFQQMIDKGVRPNIVTYTCLIHGYLSIGQWKEVVRMLKEMSAHGLEPDCFTYGLLLDYL 319

Query: 546 GHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNV 605
              G   EA  +F  M RK   PD  +YG+++  +   G + +   + + M+  G+ PN 
Sbjct: 320 CKKGKCTEARKLFDSMIRKGIKPDVSIYGIILHGYATKGALSEMHSFLDLMVGNGISPNH 379

Query: 606 PTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTY-TLLLSCCTEAR 654
              N +  AF +   + +A  +   M   GL P++  Y TL+ + C   R
Sbjct: 380 YIFNIVFCAFAKKAMIGEAMDIFNKMRQQGLSPNVVNYATLIDALCKLGR 429



 Score =  120 bits (300), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 79/300 (26%), Positives = 140/300 (46%), Gaps = 5/300 (1%)

Query: 383 LDQMVRDG----CQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLID 438
           L  M+ DG    C PN+V+YN +I+ +     +++A ++F  M   G  P+ VTY  +ID
Sbjct: 188 LLHMMADGQVRSCPPNLVSYNTVINGFFTEGQVDKAYNLFLDMTDQGIPPNVVTYTIVID 247

Query: 439 IHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIP 498
              KA  +D A  ++++M   G+ P+  TY+ +I+     G  +   ++  EM   G  P
Sbjct: 248 GLCKAQVVDRAEGVFQQMIDKGVRPNIVTYTCLIHGYLSIGQWKEVVRMLKEMSAHGLEP 307

Query: 499 NLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVF 558
           +  TY +++    K      A KL+  M   G +PD   Y I++      G L E  +  
Sbjct: 308 DCFTYGLLLDYLCKKGKCTEARKLFDSMIRKGIKPDVSIYGIILHGYATKGALSEMHSFL 367

Query: 559 AEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRV 618
             M      P+  ++ ++   + K   + +A + +  M Q GL PNV    +L+ A  ++
Sbjct: 368 DLMVGNGISPNHYIFNIVFCAFAKKAMIGEAMDIFNKMRQQGLSPNVVNYATLIDALCKL 427

Query: 619 GQLSDAYHLLQGMLNLGLKPSLQTYT-LLLSCCTEARSPYDMGFCHELMAVSGHPAHMFL 677
           G++ DA      M+N G+ P++  +T L+   CT  +         E++    HP  +F 
Sbjct: 428 GRVDDAELKFNQMINEGVAPNIVVFTSLVYGLCTIDKWEKAGELFFEMVNQGIHPNVVFF 487



 Score =  115 bits (287), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 78/286 (27%), Positives = 137/286 (47%), Gaps = 10/286 (3%)

Query: 350 LRRQAGFKHDEHTYTTMV---GILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYG 406
           L  + G + D  +Y  ++    ++G+  +    +KLLD M+  G +PN  TYN L+H Y 
Sbjct: 509 LMERVGTRPDIISYNALIRGHCLVGKTDE---ASKLLDIMLSVGLKPNECTYNTLLHGYC 565

Query: 407 RANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTF 466
           R   +++A  VF++M   G  P  VTY T++    K      A ++Y  M  +G     +
Sbjct: 566 RDGRIDDAYSVFQEMLSNGITPVVVTYNTILHGLFKTRRFSEAKELYLNMITSGKQWSIY 625

Query: 467 TYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDM 526
           TY++I+N L K   +  A ++F  + ++    +++T+NIMI    K    + A+ L+  +
Sbjct: 626 TYNIILNGLSKNNCVDEALKMFQSLCSKDLQVDIITFNIMIGALLKDGRKEDAMNLFATI 685

Query: 527 QNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNV 586
              G  PD  TY ++ E L   G L+E + +F+EM +    P+  +   LV      G++
Sbjct: 686 SANGLVPDVTTYRLIAENLIEEGSLEEFDGMFSEMEKSGCAPNSLMLNFLVRRLLLRGDI 745

Query: 587 RKAWEWYEAMLQAGLRPNVPTCNSLLSAFLR----VGQLSDAYHLL 628
            +A  +   + +        T + L+S F R       L + YH L
Sbjct: 746 SRAGAYLSKIDEKNFSLEASTTSMLISLFSREEHQAKSLPEKYHFL 791



 Score =  111 bits (278), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 71/261 (27%), Positives = 132/261 (50%), Gaps = 1/261 (0%)

Query: 364 TTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQV 423
           T M  +    R   A  +L+D M R G +P++++YN LI  +      +EA  +   M  
Sbjct: 489 TIMCNLCTEGRVMKA-QRLIDLMERVGTRPDIISYNALIRGHCLVGKTDEASKLLDIMLS 547

Query: 424 VGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQA 483
           VG +P+  TY TL+  + + G +D A  ++++M + G++P   TY+ I++ L K      
Sbjct: 548 VGLKPNECTYNTLLHGYCRDGRIDDAYSVFQEMLSNGITPVVVTYNTILHGLFKTRRFSE 607

Query: 484 AHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVME 543
           A +L+  M+  G   ++ TYNI++   +K      ALK+++ + +   + D +T++I++ 
Sbjct: 608 AKELYLNMITSGKQWSIYTYNIILNGLSKNNCVDEALKMFQSLCSKDLQVDIITFNIMIG 667

Query: 544 VLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRP 603
            L   G  ++A  +FA +     VPD   Y L+ +   + G++ +    +  M ++G  P
Sbjct: 668 ALLKDGRKEDAMNLFATISANGLVPDVTTYRLIAENLIEEGSLEEFDGMFSEMEKSGCAP 727

Query: 604 NVPTCNSLLSAFLRVGQLSDA 624
           N    N L+   L  G +S A
Sbjct: 728 NSLMLNFLVRRLLLRGDISRA 748



 Score =  106 bits (264), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 72/278 (25%), Positives = 129/278 (46%)

Query: 362 TYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQM 421
            +T++V  L    ++    +L  +MV  G  PNVV +N ++ +      + +A  +   M
Sbjct: 451 VFTSLVYGLCTIDKWEKAGELFFEMVNQGIHPNVVFFNTIMCNLCTEGRVMKAQRLIDLM 510

Query: 422 QVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHL 481
           + VG  PD ++Y  LI  H   G  D A  +   M + GL P+  TY+ +++   + G +
Sbjct: 511 ERVGTRPDIISYNALIRGHCLVGKTDEASKLLDIMLSVGLKPNECTYNTLLHGYCRDGRI 570

Query: 482 QAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIV 541
             A+ +F EM++ G  P +VTYN ++    K R +  A +LY +M  +G +    TY+I+
Sbjct: 571 DDAYSVFQEMLSNGITPVVVTYNTILHGLFKTRRFSEAKELYLNMITSGKQWSIYTYNII 630

Query: 542 MEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGL 601
           +  L     +DEA  +F  +  K+   D   + +++    K G    A   +  +   GL
Sbjct: 631 LNGLSKNNCVDEALKMFQSLCSKDLQVDIITFNIMIGALLKDGRKEDAMNLFATISANGL 690

Query: 602 RPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPS 639
            P+V T   +    +  G L +   +   M   G  P+
Sbjct: 691 VPDVTTYRLIAENLIEEGSLEEFDGMFSEMEKSGCAPN 728



 Score = 58.5 bits (140), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 71/334 (21%), Positives = 132/334 (39%), Gaps = 50/334 (14%)

Query: 461 LSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQG--CIPNLVTYNIMIALQAKARNYQS 518
           ++PD FTYS+++ C  + G L+     F  ++  G      +V   ++  L    R  ++
Sbjct: 90  VAPDVFTYSILVGCFCRMGRLEHGFAAFGLILKTGWRVNDVVVVNRLLKGLCDAKRVGEA 149

Query: 519 ALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVD 578
              L R M   G  P+ V+Y+ +++     G+ DE  A                      
Sbjct: 150 MGVLLRRMSELGCTPNVVSYNTLLK-----GFCDENRA---------------------- 182

Query: 579 LWGKAGNVRKAWEWYEAMLQAGLR---PNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLG 635
                    +A E    M    +R   PN+ + N++++ F   GQ+  AY+L   M + G
Sbjct: 183 --------EEALELLHMMADGQVRSCPPNLVSYNTVINGFFTEGQVDKAYNLFLDMTDQG 234

Query: 636 LKPSLQTYTLLLSCCTEARSPYDMGFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVG 695
           + P++ TYT+++    +A+         + M   G   ++   +    G         V 
Sbjct: 235 IPPNVVTYTIVIDGLCKAQVVDRAEGVFQQMIDKGVRPNIVTYTCLIHGYLSIGQWKEVV 294

Query: 696 SFLEMMHSEDRESKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAVKEKGMSYWL 755
             L+ M +   E        ++D+L K G   EA  +++   +K + PD      +S + 
Sbjct: 295 RMLKEMSAHGLEPDCFTYGLLLDYLCKKGKCTEARKLFDSMIRKGIKPD------VSIYG 348

Query: 756 INLHVMSDGTAVIALSRTLAWFRKQMLISGVGPS 789
           I LH    G A       +  F   M+ +G+ P+
Sbjct: 349 IILH----GYATKGALSEMHSFLDLMVGNGISPN 378


>gi|302765176|ref|XP_002966009.1| hypothetical protein SELMODRAFT_84672 [Selaginella moellendorffii]
 gi|300166823|gb|EFJ33429.1| hypothetical protein SELMODRAFT_84672 [Selaginella moellendorffii]
          Length = 413

 Score =  162 bits (410), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 99/309 (32%), Positives = 152/309 (49%)

Query: 339 DHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTY 398
           D   AL  F  L+++   K +  ++ T+V  L +  +      +  +M+  G Q +V   
Sbjct: 26  DGDRALDMFRRLKQEGSCKPNAVSFDTLVIFLCKMSRATDALAVFQEMLGAGLQADVNVC 85

Query: 399 NRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQA 458
           N LIH   R   L +A  +   M       D  TY  L+D   KAG    A++++  MQ 
Sbjct: 86  NTLIHCTCRLGMLRQARRLLHHMTAHAFVLDVFTYSYLMDALGKAGRAAKALEVFSNMQK 145

Query: 459 AGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQS 518
           AG  PDT  Y+V+I+CLGK G +  A +L  +M  +G +P+  TYNI+I + +    Y+ 
Sbjct: 146 AGCMPDTVVYNVLISCLGKQGKVDEALELLEDMNRKGIMPDCRTYNIVIDVLSSCGRYEK 205

Query: 519 ALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVD 578
           A   +  M+     PD VTY+ ++  L      DEA  +F EM+    +PD   +G L+D
Sbjct: 206 AYSFFGMMKRRKHSPDVVTYNTLLNGLKKLRRTDEACDLFDEMQANKCMPDLTTFGTLID 265

Query: 579 LWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKP 638
              KAG +  A E    +++ G  PN    N+L+S F R GQ+   Y L Q M+     P
Sbjct: 266 TLAKAGRMEDALEQSARLVKMGHVPNSYIYNALISGFCRSGQVDKGYELFQDMIECSCFP 325

Query: 639 SLQTYTLLL 647
              TYT+L+
Sbjct: 326 DSITYTILV 334



 Score =  153 bits (386), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 94/314 (29%), Positives = 154/314 (49%), Gaps = 1/314 (0%)

Query: 334 LKQLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQP 393
           L ++   T AL  F  +   AG + D +   T++    R        +LL  M       
Sbjct: 57  LCKMSRATDALAVFQEML-GAGLQADVNVCNTLIHCTCRLGMLRQARRLLHHMTAHAFVL 115

Query: 394 NVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMY 453
           +V TY+ L+ + G+A    +AL+VF  MQ  GC PD V Y  LI    K G +D A+++ 
Sbjct: 116 DVFTYSYLMDALGKAGRAAKALEVFSNMQKAGCMPDTVVYNVLISCLGKQGKVDEALELL 175

Query: 454 KKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKA 513
           + M   G+ PD  TY+++I+ L   G  + A+  F  M  +   P++VTYN ++    K 
Sbjct: 176 EDMNRKGIMPDCRTYNIVIDVLSSCGRYEKAYSFFGMMKRRKHSPDVVTYNTLLNGLKKL 235

Query: 514 RNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVY 573
           R    A  L+ +MQ     PD  T+  +++ L   G +++A    A + +   VP+  +Y
Sbjct: 236 RRTDEACDLFDEMQANKCMPDLTTFGTLIDTLAKAGRMEDALEQSARLVKMGHVPNSYIY 295

Query: 574 GLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLN 633
             L+  + ++G V K +E ++ M++    P+  T   L+  F R G  S A  LLQ M+ 
Sbjct: 296 NALISGFCRSGQVDKGYELFQDMIECSCFPDSITYTILVLGFSRRGHTSMAMELLQEMVR 355

Query: 634 LGLKPSLQTYTLLL 647
            G  P+L TY +L+
Sbjct: 356 EGHTPALATYNVLI 369



 Score =  150 bits (378), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 93/312 (29%), Positives = 148/312 (47%), Gaps = 6/312 (1%)

Query: 341 TVALGFFNWLRR------QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPN 394
           T  LG     RR         F  D  TY+ ++  LG+A +     ++   M + GC P+
Sbjct: 92  TCRLGMLRQARRLLHHMTAHAFVLDVFTYSYLMDALGKAGRAAKALEVFSNMQKAGCMPD 151

Query: 395 VVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYK 454
            V YN LI   G+   ++EAL++ + M   G  PD  TY  +ID+ +  G  + A   + 
Sbjct: 152 TVVYNVLISCLGKQGKVDEALELLEDMNRKGIMPDCRTYNIVIDVLSSCGRYEKAYSFFG 211

Query: 455 KMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKAR 514
            M+    SPD  TY+ ++N L K      A  LF EM    C+P+L T+  +I   AKA 
Sbjct: 212 MMKRRKHSPDVVTYNTLLNGLKKLRRTDEACDLFDEMQANKCMPDLTTFGTLIDTLAKAG 271

Query: 515 NYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYG 574
             + AL+    +   G  P+   Y+ ++      G +D+   +F +M   +  PD   Y 
Sbjct: 272 RMEDALEQSARLVKMGHVPNSYIYNALISGFCRSGQVDKGYELFQDMIECSCFPDSITYT 331

Query: 575 LLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNL 634
           +LV  + + G+   A E  + M++ G  P + T N L+ +    GQ+ DAY L + M+  
Sbjct: 332 ILVLGFSRRGHTSMAMELLQEMVREGHTPALATYNVLIRSLSMAGQVEDAYTLFKEMIAK 391

Query: 635 GLKPSLQTYTLL 646
           G  P +QTY+ L
Sbjct: 392 GFNPDMQTYSAL 403



 Score =  123 bits (309), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 68/237 (28%), Positives = 123/237 (51%), Gaps = 1/237 (0%)

Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLI 402
           AL     + R+ G   D  TY  ++ +L    ++         M R    P+VVTYN L+
Sbjct: 171 ALELLEDMNRK-GIMPDCRTYNIVIDVLSSCGRYEKAYSFFGMMKRRKHSPDVVTYNTLL 229

Query: 403 HSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLS 462
           +   +    +EA D+F +MQ   C PD  T+ TLID  AKAG ++ A++   ++   G  
Sbjct: 230 NGLKKLRRTDEACDLFDEMQANKCMPDLTTFGTLIDTLAKAGRMEDALEQSARLVKMGHV 289

Query: 463 PDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKL 522
           P+++ Y+ +I+   ++G +   ++LF +M+   C P+ +TY I++   ++  +   A++L
Sbjct: 290 PNSYIYNALISGFCRSGQVDKGYELFQDMIECSCFPDSITYTILVLGFSRRGHTSMAMEL 349

Query: 523 YRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDL 579
            ++M   G  P   TY++++  L   G +++A  +F EM  K + PD   Y  L +L
Sbjct: 350 LQEMVREGHTPALATYNVLIRSLSMAGQVEDAYTLFKEMIAKGFNPDMQTYSALPNL 406


>gi|302799689|ref|XP_002981603.1| hypothetical protein SELMODRAFT_114722 [Selaginella moellendorffii]
 gi|300150769|gb|EFJ17418.1| hypothetical protein SELMODRAFT_114722 [Selaginella moellendorffii]
          Length = 609

 Score =  162 bits (410), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 125/425 (29%), Positives = 189/425 (44%), Gaps = 45/425 (10%)

Query: 350 LRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRAN 409
           +R    +K D  TYT ++    ++       K+L  M    C PNVVTY+ L+H   +A 
Sbjct: 179 MREDGAWKPDVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAG 238

Query: 410 YLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYS 469
            L++ALD+F++M   GC P+ VTY TLI     A  +D A  +  +M A     DT +Y+
Sbjct: 239 DLDQALDLFRRMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPADTVSYN 298

Query: 470 VIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQN- 528
            +++   + G ++ A QLF EM  + C+P+ +TY  ++     A   + A  L  +M+  
Sbjct: 299 ALLDGYCRLGRIEEAKQLFKEMAAKSCLPDRITYTCLVRGFCNASRLEEARFLLENMKTA 358

Query: 529 AGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRK 588
           AG +PD VTYSIV+          EA     EM  +N  P+   Y  L+D   KAG V  
Sbjct: 359 AGIDPDVVTYSIVVAGYSRAKRFVEAAEFIQEMIARNVAPNAVTYSSLIDGLCKAGRVNH 418

Query: 589 AWE-------------------------------WYEAMLQAGLRPNVPTCNSLLSAFLR 617
           A E                                 E M+   + P+V T NS++ A  R
Sbjct: 419 AMEVLKNVDKPDVVTYTIVIEGLCGTDRTEEALTLLEEMVNKRVEPSVGTFNSVIGALCR 478

Query: 618 VGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGFCHELMAV-------SG 670
           +G + +A+ LL  M   GL+P + TYT LL   +       M   +EL  V       S 
Sbjct: 479 LGDMDEAWKLLVAMAAHGLEPGMVTYTTLLEGFSRTGR---MEIAYELFEVMRRKAKKSS 535

Query: 671 HPAHMF---LLSMPSPGPDGQNVRDHVGSFLEMMHSEDRESKRGLVDAVVDFLHKSGLKE 727
             A++      S    G       D   + +E + S + E       A+VD L ++G  E
Sbjct: 536 SAANLVPEQAFSALIRGLCKAREIDKAMAVVEELRSRECEPAEEDCLAIVDGLLRAGRTE 595

Query: 728 EAGSV 732
           EAG +
Sbjct: 596 EAGKL 600



 Score =  128 bits (321), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 112/457 (24%), Positives = 206/457 (45%), Gaps = 61/457 (13%)

Query: 329 QANQVLKQLQD-HTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMV 387
           +A +VLK+++D  +VA               D  TY+T++    +  +     ++L +MV
Sbjct: 27  KAYEVLKEMRDGKSVA--------------PDLVTYSTVINGFCKQGEMDRACEILREMV 72

Query: 388 -RDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFL 446
            RDG  P+VVTY  ++    R   ++ A ++ ++M++ G EPD+ T+  LI     A  +
Sbjct: 73  TRDGMAPDVVTYTSVVDGLCRDGKMDRACEMVREMKLKGVEPDKFTFSALITGWCNARKV 132

Query: 447 DVAMDMYKKMQAA--------------GL------------------------SPDTFTY 468
           D A+ +YK++  +              GL                         PD  TY
Sbjct: 133 DEALKLYKEILTSSCRLDAVSSSALITGLCRERRIGEAYELFQEMEMREDGAWKPDVVTY 192

Query: 469 SVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQN 528
           + +I+   K+G+L+ A ++   M  + C+PN+VTY+ ++    KA +   AL L+R M +
Sbjct: 193 TALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQALDLFRRMTS 252

Query: 529 AGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRK 588
            G  P+ VTY+ ++  L     +D A  +  EM       D   Y  L+D + + G + +
Sbjct: 253 KGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPADTVSYNALLDGYCRLGRIEE 312

Query: 589 AWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLN-LGLKPSLQTYTLLL 647
           A + ++ M      P+  T   L+  F    +L +A  LL+ M    G+ P + TY++++
Sbjct: 313 AKQLFKEMAAKSCLPDRITYTCLVRGFCNASRLEEARFLLENMKTAAGIDPDVVTYSIVV 372

Query: 648 SCCTEARSPYDMG-FCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDR 706
           +  + A+   +   F  E++A +  P  +   S+     DG      V   +E++ + D+
Sbjct: 373 AGYSRAKRFVEAAEFIQEMIARNVAPNAVTYSSL----IDGLCKAGRVNHAMEVLKNVDK 428

Query: 707 ESKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYP 743
                    V++ L  +   EEA ++ E    K V P
Sbjct: 429 PDVVTYT-IVIEGLCGTDRTEEALTLLEEMVNKRVEP 464



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 83/266 (31%), Positives = 138/266 (51%), Gaps = 5/266 (1%)

Query: 387 VRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQV-VGCEPDRVTYCTLIDIHAKAGF 445
           +R+   PN  TYN +++   +A   ++A +V K+M+      PD VTY T+I+   K G 
Sbjct: 1   MREFVAPNERTYNVVVNGLCKARLTSKAYEVLKEMRDGKSVAPDLVTYSTVINGFCKQGE 60

Query: 446 LDVAMDMYKKMQAA-GLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYN 504
           +D A ++ ++M    G++PD  TY+ +++ L + G +  A ++  EM  +G  P+  T++
Sbjct: 61  MDRACEILREMVTRDGMAPDVVTYTSVVDGLCRDGKMDRACEMVREMKLKGVEPDKFTFS 120

Query: 505 IMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRK 564
            +I     AR    ALKLY+++  +    D V+ S ++  L     + EA  +F EM  +
Sbjct: 121 ALITGWCNARKVDEALKLYKEILTSSCRLDAVSSSALITGLCRERRIGEAYELFQEMEMR 180

Query: 565 N---WVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQL 621
               W PD   Y  L+D + K+GN+ KA +    M      PNV T +SLL    + G L
Sbjct: 181 EDGAWKPDVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDL 240

Query: 622 SDAYHLLQGMLNLGLKPSLQTYTLLL 647
             A  L + M + G  P++ TYT L+
Sbjct: 241 DQALDLFRRMTSKGCVPNVVTYTTLI 266



 Score =  120 bits (300), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 87/287 (30%), Positives = 134/287 (46%), Gaps = 14/287 (4%)

Query: 359 DEHTYTTMVGILGRARQFGAINKLLDQM-VRDGCQPNVVTYNRLIHSYGRANYLNEALDV 417
           D  TYT +V     A +      LL+ M    G  P+VVTY+ ++  Y RA    EA + 
Sbjct: 328 DRITYTCLVRGFCNASRLEEARFLLENMKTAAGIDPDVVTYSIVVAGYSRAKRFVEAAEF 387

Query: 418 FKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGK 477
            ++M      P+ VTY +LID   KAG ++ AM++ K +      PD  TY+++I  L  
Sbjct: 388 IQEMIARNVAPNAVTYSSLIDGLCKAGRVNHAMEVLKNVD----KPDVVTYTIVIEGLCG 443

Query: 478 AGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVT 537
               + A  L  EMVN+   P++ T+N +I    +  +   A KL   M   G EP  VT
Sbjct: 444 TDRTEEALTLLEEMVNKRVEPSVGTFNSVIGALCRLGDMDEAWKLLVAMAAHGLEPGMVT 503

Query: 538 YSIVMEVLGHCGYLDEAEAVFAEMRRK--------NWVPDEPVYGLLVDLWGKAGNVRKA 589
           Y+ ++E     G ++ A  +F  MRRK        N VP++    L+  L  KA  + KA
Sbjct: 504 YTTLLEGFSRTGRMEIAYELFEVMRRKAKKSSSAANLVPEQAFSALIRGLC-KAREIDKA 562

Query: 590 WEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGL 636
               E +      P    C +++   LR G+  +A  L+  +  +GL
Sbjct: 563 MAVVEELRSRECEPAEEDCLAIVDGLLRAGRTEEAGKLINSISKVGL 609


>gi|359497112|ref|XP_003635427.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
           mitochondrial-like [Vitis vinifera]
          Length = 740

 Score =  162 bits (410), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 92/293 (31%), Positives = 153/293 (52%), Gaps = 1/293 (0%)

Query: 364 TTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQV 423
           T + G + R R   A   + + M+  GC P++ TYN LI    +  YL  A ++  +MQ+
Sbjct: 376 TLINGYVSRGRLDEAKAVMHESMLSVGCGPDIFTYNTLILGLCKKGYLVSARELMNEMQI 435

Query: 424 VGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQA 483
            GCEP+ +TY  LID   K G L+ A ++  +M   GL+ +   Y+ +I+ L K   +Q 
Sbjct: 436 KGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQD 495

Query: 484 AHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVME 543
           A  +F +M ++GC P++ T+N +I    K   ++ AL LY+DM   G   + +TY+ ++ 
Sbjct: 496 ALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIH 555

Query: 544 VLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRP 603
                G + EA  +  +M  +    D+  Y  L+    +AGN+ K    +E M+  GL P
Sbjct: 556 AFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNP 615

Query: 604 NVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS-CCTEARS 655
           N  +CN L++   R G +  A   L+ M++ GL P + TY  L++  C   R+
Sbjct: 616 NNISCNILINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRA 668



 Score =  145 bits (367), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 89/295 (30%), Positives = 150/295 (50%)

Query: 354 AGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNE 413
            G   D  TY T++  L +     +  +L+++M   GC+PNV+TY  LI  + +   L E
Sbjct: 401 VGCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEE 460

Query: 414 ALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIIN 473
           A +V  +M   G   + V Y  LI    K   +  A++M+  M + G  PD FT++ +I 
Sbjct: 461 ARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIF 520

Query: 474 CLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEP 533
            L K    + A  L+ +M+ +G I N +TYN +I    +    Q ALKL  DM   G   
Sbjct: 521 GLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPL 580

Query: 534 DKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWY 593
           D +TY+ +++ L   G +++  A+F +M  K   P+     +L++   + GN++ A E+ 
Sbjct: 581 DDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHALEFL 640

Query: 594 EAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
             M+  GL P++ T NSL++   + G+  +A +L   +   G+ P   TY  L+S
Sbjct: 641 RDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEGICPDAITYNTLIS 695



 Score =  133 bits (334), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 107/404 (26%), Positives = 186/404 (46%), Gaps = 19/404 (4%)

Query: 359 DEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVF 418
           D +T+   +  L +  +     KL+D+M+  G  PN  TY  L+H   R   ++EA  + 
Sbjct: 304 DVNTFNDAIHGLCKMLRIHEAAKLVDRMLLRGFTPNSFTYGVLMHGLCRMGKVDEARMLL 363

Query: 419 KQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMD-MYKKMQAAGLSPDTFTYSVIINCLGK 477
            ++      P+ V + TLI+ +   G LD A   M++ M + G  PD FTY+ +I  L K
Sbjct: 364 NKVP----NPNVVLFNTLINGYVSRGRLDEAKAVMHESMLSVGCGPDIFTYNTLILGLCK 419

Query: 478 AGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVT 537
            G+L +A +L  EM  +GC PN++TY I+I    K    + A  +  +M   G   + V 
Sbjct: 420 KGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVG 479

Query: 538 YSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAML 597
           Y+ ++  L     + +A  +F +M  K   PD   +  L+    K     +A   Y+ ML
Sbjct: 480 YNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDML 539

Query: 598 QAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYT-LLLSCCTEARSP 656
             G+  N  T N+L+ AFLR G + +A  L+  ML  G      TY  L+ + C      
Sbjct: 540 LEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIE 599

Query: 657 YDMGFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRESKRGLVDAV 716
             +    ++M+   +P ++    + +      N++  +    +M+H       RGL   +
Sbjct: 600 KGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHALEFLRDMIH-------RGLTPDI 652

Query: 717 VDF------LHKSGLKEEAGSVWEVAAQKNVYPDAVKEKGMSYW 754
           V +      L K+G  +EA ++++    + + PDA+    +  W
Sbjct: 653 VTYNSLINGLCKTGRAQEALNLFDKLQVEGICPDAITYNTLISW 696



 Score =  132 bits (331), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 80/287 (27%), Positives = 145/287 (50%)

Query: 362 TYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQM 421
           TYT ++    +  +      +LD+M   G   N V YN LI +  +   + +AL++F  M
Sbjct: 444 TYTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDM 503

Query: 422 QVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHL 481
              GC+PD  T+ +LI    K    + A+ +Y+ M   G+  +T TY+ +I+   + G +
Sbjct: 504 SSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAM 563

Query: 482 QAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIV 541
           Q A +L  +M+ +GC  + +TYN +I    +A N +  L L+ DM + G  P+ ++ +I+
Sbjct: 564 QEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNIL 623

Query: 542 MEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGL 601
           +  L   G +  A     +M  +   PD   Y  L++   K G  ++A   ++ +   G+
Sbjct: 624 INGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEGI 683

Query: 602 RPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
            P+  T N+L+S   + G   DA+ LL   ++ G  P+  T+ +L+S
Sbjct: 684 CPDAITYNTLISWHCKEGMFDDAHLLLSRGVDSGFIPNEVTWYILVS 730



 Score =  127 bits (319), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 86/300 (28%), Positives = 152/300 (50%), Gaps = 13/300 (4%)

Query: 296 NVVESVSRILRQWKWGPLAE-----EALGNTNYSMDAYQANQVLKQL-QDHTV--ALGFF 347
           NV+     I R  K G L E     + +     +++A   N ++  L +D  V  AL  F
Sbjct: 441 NVITYTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMF 500

Query: 348 NWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGR 407
             +  + G K D  T+ +++  L +  +F     L   M+ +G   N +TYN LIH++ R
Sbjct: 501 GDMSSK-GCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLR 559

Query: 408 ANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFT 467
              + EAL +   M   GC  D +TY  LI    +AG ++  + +++ M + GL+P+  +
Sbjct: 560 RGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNIS 619

Query: 468 YSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQ 527
            +++IN L + G++Q A +   +M+++G  P++VTYN +I    K    Q AL L+  +Q
Sbjct: 620 CNILINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQ 679

Query: 528 NAGFEPDKVTYSIVMEVLGHC--GYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGN 585
             G  PD +TY+ ++    HC  G  D+A  + +      ++P+E  + +LV  + K G+
Sbjct: 680 VEGICPDAITYNTLIS--WHCKEGMFDDAHLLLSRGVDSGFIPNEVTWYILVSNFIKEGD 737



 Score =  118 bits (295), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 74/257 (28%), Positives = 124/257 (48%)

Query: 363 YTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQ 422
           Y  ++  L +  +      +   M   GC+P++ T+N LI    + N   EAL +++ M 
Sbjct: 480 YNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDML 539

Query: 423 VVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQ 482
           + G   + +TY TLI    + G +  A+ +   M   G   D  TY+ +I  L +AG+++
Sbjct: 540 LEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIE 599

Query: 483 AAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVM 542
               LF +M+++G  PN ++ NI+I    +  N Q AL+  RDM + G  PD VTY+ ++
Sbjct: 600 KGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLI 659

Query: 543 EVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLR 602
             L   G   EA  +F +++ +   PD   Y  L+    K G    A       + +G  
Sbjct: 660 NGLCKTGRAQEALNLFDKLQVEGICPDAITYNTLISWHCKEGMFDDAHLLLSRGVDSGFI 719

Query: 603 PNVPTCNSLLSAFLRVG 619
           PN  T   L+S F++ G
Sbjct: 720 PNEVTWYILVSNFIKEG 736



 Score =  118 bits (295), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 93/365 (25%), Positives = 158/365 (43%), Gaps = 42/365 (11%)

Query: 328 YQANQVLKQLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMV 387
           YQ  ++L+   D   ++  F W   Q G+ H    Y  ++  LG A +F   + LL QM 
Sbjct: 97  YQLCKLLELPLDVPTSMELFQWAGTQKGYCHMFDVYYMLIDKLGAAGEFKTTDALLMQMK 156

Query: 388 RDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQ-VVGCEPDRVTYCTLIDIHAKAGFL 446
           ++G       +  ++  YGRA    +A  +   M+ V  CEP   +Y  ++D+       
Sbjct: 157 QEGIVFRESLFILIMKHYGRAGLPGQATRLLLDMRGVYSCEPTFRSYNVVLDVLLAGNCP 216

Query: 447 DVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIM 506
            V  +++ +M + G+SP  +T+ V++  L     + +A  L  +M   GC+PN + Y  +
Sbjct: 217 KVVPNVFYEMLSKGISPTVYTFGVVMKALCLVNEVDSACALLKDMTRHGCVPNAIVYQTL 276

Query: 507 I-ALQAKAR----------------------------------NYQSALKLYRDMQNAGF 531
           I AL    R                                      A KL   M   GF
Sbjct: 277 IHALSKVGRVNEVLKLLEEMLLMGCIPDVNTFNDAIHGLCKMLRIHEAAKLVDRMLLRGF 336

Query: 532 EPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWE 591
            P+  TY ++M  L   G +DEA  +  ++   N V    ++  L++ +   G + +A  
Sbjct: 337 TPNSFTYGVLMHGLCRMGKVDEARMLLNKVPNPNVV----LFNTLINGYVSRGRLDEAKA 392

Query: 592 -WYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS-C 649
             +E+ML  G  P++ T N+L+    + G L  A  L+  M   G +P++ TYT+L+   
Sbjct: 393 VMHESMLSVGCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRF 452

Query: 650 CTEAR 654
           C E R
Sbjct: 453 CKEGR 457


>gi|115445137|ref|NP_001046348.1| Os02g0226900 [Oryza sativa Japonica Group]
 gi|49388538|dbj|BAD25660.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|49388672|dbj|BAD25856.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|113535879|dbj|BAF08262.1| Os02g0226900 [Oryza sativa Japonica Group]
          Length = 637

 Score =  162 bits (410), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 77/189 (40%), Positives = 115/189 (60%)

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
           + G   D   Y  +   LG+ +Q   I+ L D+M  +G  P+V TYN +I SYGR   ++
Sbjct: 421 EKGIVTDVGMYNMVFSALGKLKQVSFISNLFDKMKTNGIIPDVFTYNIMISSYGRVGLVD 480

Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
           +A ++F+ M+   C+PD VTY +LI+   K G LD A  ++K+MQ  G  PD FTYS++I
Sbjct: 481 KASELFEVMEASSCKPDVVTYNSLINCLGKHGDLDEAHMLFKEMQEKGYDPDVFTYSILI 540

Query: 473 NCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFE 532
            C GK+  ++ A  LF EM+++GC PN+VTYNI++    +    + A KLY  M+  G  
Sbjct: 541 ECFGKSNKVEMACSLFDEMISEGCTPNIVTYNILLDCLERRGKTEEAHKLYETMKQQGLI 600

Query: 533 PDKVTYSIV 541
           PD +TYSI+
Sbjct: 601 PDSITYSIL 609



 Score =  147 bits (370), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 92/316 (29%), Positives = 154/316 (48%), Gaps = 32/316 (10%)

Query: 363 YTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTY------------------------ 398
           + T++  LG+ +    +  +L +MV + CQPN  TY                        
Sbjct: 294 FNTIIEALGKNKMVDKVIFVLSKMVENDCQPNQFTYSITLDILATEGQLHRLNEVLDICS 353

Query: 399 ---NRLIHSY-----GRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAM 450
              NR I+SY      ++ + +EA +VF +M     + DR  + +++++   A     A+
Sbjct: 354 RFMNRSIYSYLVKSLCKSGHASEAHNVFCRMWNSHEKGDRDAFVSMLEVLCNAEKTLEAI 413

Query: 451 DMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQ 510
           D+   M   G+  D   Y+++ + LGK   +     LF +M   G IP++ TYNIMI+  
Sbjct: 414 DLLHMMPEKGIVTDVGMYNMVFSALGKLKQVSFISNLFDKMKTNGIIPDVFTYNIMISSY 473

Query: 511 AKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDE 570
            +      A +L+  M+ +  +PD VTY+ ++  LG  G LDEA  +F EM+ K + PD 
Sbjct: 474 GRVGLVDKASELFEVMEASSCKPDVVTYNSLINCLGKHGDLDEAHMLFKEMQEKGYDPDV 533

Query: 571 PVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQG 630
             Y +L++ +GK+  V  A   ++ M+  G  PN+ T N LL    R G+  +A+ L + 
Sbjct: 534 FTYSILIECFGKSNKVEMACSLFDEMISEGCTPNIVTYNILLDCLERRGKTEEAHKLYET 593

Query: 631 MLNLGLKPSLQTYTLL 646
           M   GL P   TY++L
Sbjct: 594 MKQQGLIPDSITYSIL 609



 Score =  145 bits (367), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 105/446 (23%), Positives = 188/446 (42%), Gaps = 46/446 (10%)

Query: 306 RQWKWGPLAEEALGNTNYSMDAYQANQVLKQLQDHTVALGFFNWLR--RQAGFKHDEHTY 363
           R+   G    E +    Y +D +  N +L  L    +    F      +Q     D +TY
Sbjct: 200 REVSKGFQVYEEMRRKGYKLDIFAYNMLLDALAKAGMVDQAFQVFEDMKQKHCVPDAYTY 259

Query: 364 TTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQV 423
           T ++ + G+A +        D+MV  GC  N++ +N +I + G+   +++ + V  +M  
Sbjct: 260 TILIRMSGKAGRTSKFLSFFDEMVSKGCVLNLIAFNTIIEALGKNKMVDKVIFVLSKMVE 319

Query: 424 VGCEPDRVTYCTLIDIHAKAG---FLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGH 480
             C+P++ TY   +DI A  G    L+  +D+  +     +      YS ++  L K+GH
Sbjct: 320 NDCQPNQFTYSITLDILATEGQLHRLNEVLDICSRFMNRSI------YSYLVKSLCKSGH 373

Query: 481 LQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSI 540
              AH +FC M N     +   +  M+ +   A     A+ L   M   G   D   Y++
Sbjct: 374 ASEAHNVFCRMWNSHEKGDRDAFVSMLEVLCNAEKTLEAIDLLHMMPEKGIVTDVGMYNM 433

Query: 541 VMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAG 600
           V   LG    +     +F +M+    +PD   Y +++  +G+ G V KA E +E M  + 
Sbjct: 434 VFSALGKLKQVSFISNLFDKMKTNGIIPDVFTYNIMISSYGRVGLVDKASELFEVMEASS 493

Query: 601 LRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMG 660
            +P+V T NSL++   + G L +A+ L + M   G  P + TY++L+ C  ++       
Sbjct: 494 CKPDVVTYNSLINCLGKHGDLDEAHMLFKEMQEKGYDPDVFTYSILIECFGKS------- 546

Query: 661 FCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRESKRGLVDAVVDFL 720
                                       N  +   S  + M SE         + ++D L
Sbjct: 547 ----------------------------NKVEMACSLFDEMISEGCTPNIVTYNILLDCL 578

Query: 721 HKSGLKEEAGSVWEVAAQKNVYPDAV 746
            + G  EEA  ++E   Q+ + PD++
Sbjct: 579 ERRGKTEEAHKLYETMKQQGLIPDSI 604



 Score =  133 bits (335), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 70/227 (30%), Positives = 122/227 (53%)

Query: 357 KHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALD 416
           K D   + +M+ +L  A +      LL  M   G   +V  YN +  + G+   ++   +
Sbjct: 390 KGDRDAFVSMLEVLCNAEKTLEAIDLLHMMPEKGIVTDVGMYNMVFSALGKLKQVSFISN 449

Query: 417 VFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLG 476
           +F +M+  G  PD  TY  +I  + + G +D A ++++ M+A+   PD  TY+ +INCLG
Sbjct: 450 LFDKMKTNGIIPDVFTYNIMISSYGRVGLVDKASELFEVMEASSCKPDVVTYNSLINCLG 509

Query: 477 KAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKV 536
           K G L  AH LF EM  +G  P++ TY+I+I    K+   + A  L+ +M + G  P+ V
Sbjct: 510 KHGDLDEAHMLFKEMQEKGYDPDVFTYSILIECFGKSNKVEMACSLFDEMISEGCTPNIV 569

Query: 537 TYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKA 583
           TY+I+++ L   G  +EA  ++  M+++  +PD   Y +L  L  ++
Sbjct: 570 TYNILLDCLERRGKTEEAHKLYETMKQQGLIPDSITYSILERLESRS 616



 Score =  114 bits (286), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 55/160 (34%), Positives = 96/160 (60%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           G   D  TY  M+   GR       ++L + M    C+P+VVTYN LI+  G+   L+EA
Sbjct: 458 GIIPDVFTYNIMISSYGRVGLVDKASELFEVMEASSCKPDVVTYNSLINCLGKHGDLDEA 517

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
             +FK+MQ  G +PD  TY  LI+   K+  +++A  ++ +M + G +P+  TY+++++C
Sbjct: 518 HMLFKEMQEKGYDPDVFTYSILIECFGKSNKVEMACSLFDEMISEGCTPNIVTYNILLDC 577

Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKAR 514
           L + G  + AH+L+  M  QG IP+ +TY+I+  L+++++
Sbjct: 578 LERRGKTEEAHKLYETMKQQGLIPDSITYSILERLESRSQ 617



 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 27/92 (29%), Positives = 50/92 (54%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           ++ G+  D  TY+ ++   G++ +      L D+M+ +GC PN+VTYN L+    R    
Sbjct: 525 QEKGYDPDVFTYSILIECFGKSNKVEMACSLFDEMISEGCTPNIVTYNILLDCLERRGKT 584

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKA 443
            EA  +++ M+  G  PD +TY  L  + +++
Sbjct: 585 EEAHKLYETMKQQGLIPDSITYSILERLESRS 616


>gi|359477281|ref|XP_003631958.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g06920-like [Vitis vinifera]
          Length = 898

 Score =  162 bits (410), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 136/560 (24%), Positives = 231/560 (41%), Gaps = 92/560 (16%)

Query: 260 DAKVVECVSERFSKPSREMKIPAGLAPFSRHFASTGNVVESVSRILRQWKWGPLAEEALG 319
           D KVV      FS    + KIP       R+       V+ V  IL    WGP  E +L 
Sbjct: 38  DGKVV------FSADGVDKKIP-------RNNEGIRKGVDDVCCILESGPWGPTLENSLS 84

Query: 320 NTNYSMDAYQANQVLKQLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAI 379
                        VLK+L+D   A+ +F W  +Q    H    Y +++ ++ R  +F  +
Sbjct: 85  ALGEKPLPELVIGVLKRLKDANTAVNYFQWAEKQTEKVHCPEAYNSLLMVMARNTEFDHL 144

Query: 380 NKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDV---------------------- 417
            ++L++M   G  P+      L+ +  ++  L EA D+                      
Sbjct: 145 ERILEEMSLSGFGPSSNISIELVANCVKSRKLREAFDIIQTMRKFKFRPAFSAYTILIGA 204

Query: 418 -------------FKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPD 464
                        F QMQ +G E +   + TLI + A+ G +D A+ +  +M++  L  D
Sbjct: 205 LSEVREPDPMLILFHQMQELGYEVNVHLFTTLIRVFAREGRVDAALSLLDEMKSNSLDAD 264

Query: 465 TFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYR 524
              Y+V I+C GKAG +  + + F EM + G +P+ VTY  MI +  KA     A++L+ 
Sbjct: 265 IVLYNVCIDCFGKAGKVDMSWKFFHEMKSHGLMPDDVTYTSMIGVLCKANRLDEAVELFE 324

Query: 525 DMQN-----------------------------------AGFEPDKVTYSIVMEVLGHCG 549
            ++                                     G  P  + Y+ ++  LG   
Sbjct: 325 QLEQNRKVPCAYAYNTMIMGYGSAGKFDEAYGLLERQKAKGSIPSVIAYNCILTCLGKKR 384

Query: 550 YLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCN 609
            ++EA  +F EM+R + VP+ P Y +L+D+  + G +  A E  + M +AGL PNV T N
Sbjct: 385 RVEEALRIFEEMKR-DAVPNVPTYNILIDMLCREGKLNAALEIRDDMERAGLFPNVLTVN 443

Query: 610 SLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLL---LSCCTEARSPYDMGFCHELM 666
            ++    +  +L +A  + +GM +    P+  T++ L   L  C      Y +   +E M
Sbjct: 444 IMIDRLCKAQKLEEACSIFEGMDDKVCTPNAVTFSSLIDGLGKCGRVDDAYSL---YEKM 500

Query: 667 AVSGH-PAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRESKRGLVDAVVDFLHKSGL 725
              GH P  +   S+           D    + EM+H+        L++  +D + K+G 
Sbjct: 501 LDCGHVPGAIVYTSLIRSFFKCGRKEDGHKIYKEMVHT-GCSPDLTLINTYMDCVFKAGE 559

Query: 726 KEEAGSVWEVAAQKNVYPDA 745
            E+  +++         PDA
Sbjct: 560 TEKGRALFREINAHGFIPDA 579



 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 95/305 (31%), Positives = 154/305 (50%), Gaps = 2/305 (0%)

Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLI 402
           AL  F  ++R A    +  TY  ++ +L R  +  A  ++ D M R G  PNV+T N +I
Sbjct: 389 ALRIFEEMKRDA--VPNVPTYNILIDMLCREGKLNAALEIRDDMERAGLFPNVLTVNIMI 446

Query: 403 HSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLS 462
               +A  L EA  +F+ M    C P+ VT+ +LID   K G +D A  +Y+KM   G  
Sbjct: 447 DRLCKAQKLEEACSIFEGMDDKVCTPNAVTFSSLIDGLGKCGRVDDAYSLYEKMLDCGHV 506

Query: 463 PDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKL 522
           P    Y+ +I    K G  +  H+++ EMV+ GC P+L   N  +    KA   +    L
Sbjct: 507 PGAIVYTSLIRSFFKCGRKEDGHKIYKEMVHTGCSPDLTLINTYMDCVFKAGETEKGRAL 566

Query: 523 YRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGK 582
           +R++   GF PD  +YSI++  L   G  +E   +F  M+ +  V D   Y  ++D + K
Sbjct: 567 FREINAHGFIPDARSYSILIHGLVKAGLANETYELFYAMKEQGCVLDTHAYNAVIDGFCK 626

Query: 583 AGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQT 642
           +G V KA++  E M   G  P V T  S++    ++ +L +AY L +   + G+K ++  
Sbjct: 627 SGKVNKAYQLLEEMKVKGHPPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGIKLNVVV 686

Query: 643 YTLLL 647
           Y+ L+
Sbjct: 687 YSSLI 691



 Score =  152 bits (383), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 96/337 (28%), Positives = 164/337 (48%), Gaps = 1/337 (0%)

Query: 362 TYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQM 421
           T+++++  LG+  +      L ++M+  G  P  + Y  LI S+ +     +   ++K+M
Sbjct: 476 TFSSLIDGLGKCGRVDDAYSLYEKMLDCGHVPGAIVYTSLIRSFFKCGRKEDGHKIYKEM 535

Query: 422 QVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHL 481
              GC PD     T +D   KAG  +    +++++ A G  PD  +YS++I+ L KAG  
Sbjct: 536 VHTGCSPDLTLINTYMDCVFKAGETEKGRALFREINAHGFIPDARSYSILIHGLVKAGLA 595

Query: 482 QAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIV 541
              ++LF  M  QGC+ +   YN +I    K+     A +L  +M+  G  P  VTY  V
Sbjct: 596 NETYELFYAMKEQGCVLDTHAYNAVIDGFCKSGKVNKAYQLLEEMKVKGHPPTVVTYGSV 655

Query: 542 MEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGL 601
           ++ L     LDEA  +F E +      +  VY  L+D +GK G + +A+   E ++Q GL
Sbjct: 656 IDGLAKIDRLDEAYMLFEEAKSNGIKLNVVVYSSLIDGFGKVGRIDEAYLIMEELMQKGL 715

Query: 602 RPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS-CCTEARSPYDMG 660
            PNV T N LL A ++  ++++A    Q M +L   P+  TY++L++  C   +      
Sbjct: 716 TPNVYTWNCLLDALVKAEEINEALICFQSMKDLKCPPNQITYSILINGLCRVRKFNKAFV 775

Query: 661 FCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSF 697
           F  E+  +   P  +   +M S      N+ +  G F
Sbjct: 776 FWQEMQKLGLKPNTITYTTMISGLAKAGNILEASGLF 812



 Score =  129 bits (325), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 72/276 (26%), Positives = 135/276 (48%)

Query: 349 WLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRA 408
           +  ++ G   D H Y  ++    ++ +     +LL++M   G  P VVTY  +I    + 
Sbjct: 603 YAMKEQGCVLDTHAYNAVIDGFCKSGKVNKAYQLLEEMKVKGHPPTVVTYGSVIDGLAKI 662

Query: 409 NYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTY 468
           + L+EA  +F++ +  G + + V Y +LID   K G +D A  + +++   GL+P+ +T+
Sbjct: 663 DRLDEAYMLFEEAKSNGIKLNVVVYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTW 722

Query: 469 SVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQN 528
           + +++ L KA  +  A   F  M +  C PN +TY+I+I    + R +  A   +++MQ 
Sbjct: 723 NCLLDALVKAEEINEALICFQSMKDLKCPPNQITYSILINGLCRVRKFNKAFVFWQEMQK 782

Query: 529 AGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRK 588
            G +P+ +TY+ ++  L   G + EA  +F+  +    +PD   Y  +++    A     
Sbjct: 783 LGLKPNTITYTTMISGLAKAGNILEASGLFSRFKANGGIPDSASYNAMIEGLSSANKAMD 842

Query: 589 AWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDA 624
           A+  +E     G   +  TC  LL A  +   L  A
Sbjct: 843 AYALFEETRLKGCNIHTKTCVVLLDALHKAECLEQA 878



 Score =  121 bits (303), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 80/316 (25%), Positives = 150/316 (47%), Gaps = 7/316 (2%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           GF  D  +Y+ ++  L +A       +L   M   GC  +   YN +I  + ++  +N+A
Sbjct: 574 GFIPDARSYSILIHGLVKAGLANETYELFYAMKEQGCVLDTHAYNAVIDGFCKSGKVNKA 633

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
             + ++M+V G  P  VTY ++ID  AK   LD A  ++++ ++ G+  +   YS +I+ 
Sbjct: 634 YQLLEEMKVKGHPPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGIKLNVVVYSSLIDG 693

Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPD 534
            GK G +  A+ +  E++ +G  PN+ T+N ++    KA     AL  ++ M++    P+
Sbjct: 694 FGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEINEALICFQSMKDLKCPPN 753

Query: 535 KVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYE 594
           ++TYSI++  L      ++A   + EM++    P+   Y  ++    KAGN+ +A   + 
Sbjct: 754 QITYSILINGLCRVRKFNKAFVFWQEMQKLGLKPNTITYTTMISGLAKAGNILEASGLFS 813

Query: 595 AMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEAR 654
                G  P+  + N+++       +  DAY L +     G     +T  +LL    +A 
Sbjct: 814 RFKANGGIPDSASYNAMIEGLSSANKAMDAYALFEETRLKGCNIHTKTCVVLLDALHKAE 873

Query: 655 SPYDMGFCHELMAVSG 670
                  C E  A+ G
Sbjct: 874 -------CLEQAAIVG 882



 Score =  107 bits (268), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 78/324 (24%), Positives = 144/324 (44%), Gaps = 11/324 (3%)

Query: 346 FFNWLRRQAGFK-HDEHTYT----------TMVGILGRARQFGAINKLLDQMVRDGCQPN 394
           FF   R++ G K + E  +T          T +  + +A +      L  ++   G  P+
Sbjct: 519 FFKCGRKEDGHKIYKEMVHTGCSPDLTLINTYMDCVFKAGETEKGRALFREINAHGFIPD 578

Query: 395 VVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYK 454
             +Y+ LIH   +A   NE  ++F  M+  GC  D   Y  +ID   K+G ++ A  + +
Sbjct: 579 ARSYSILIHGLVKAGLANETYELFYAMKEQGCVLDTHAYNAVIDGFCKSGKVNKAYQLLE 638

Query: 455 KMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKAR 514
           +M+  G  P   TY  +I+ L K   L  A+ LF E  + G   N+V Y+ +I    K  
Sbjct: 639 EMKVKGHPPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGIKLNVVVYSSLIDGFGKVG 698

Query: 515 NYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYG 574
               A  +  ++   G  P+  T++ +++ L     ++EA   F  M+     P++  Y 
Sbjct: 699 RIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEINEALICFQSMKDLKCPPNQITYS 758

Query: 575 LLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNL 634
           +L++   +     KA+ +++ M + GL+PN  T  +++S   + G + +A  L       
Sbjct: 759 ILINGLCRVRKFNKAFVFWQEMQKLGLKPNTITYTTMISGLAKAGNILEASGLFSRFKAN 818

Query: 635 GLKPSLQTYTLLLSCCTEARSPYD 658
           G  P   +Y  ++   + A    D
Sbjct: 819 GGIPDSASYNAMIEGLSSANKAMD 842



 Score =  100 bits (250), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 58/212 (27%), Positives = 110/212 (51%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           +  G K +   Y++++   G+  +      +++++++ G  PNV T+N L+ +  +A  +
Sbjct: 676 KSNGIKLNVVVYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEI 735

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
           NEAL  F+ M+ + C P+++TY  LI+   +    + A   +++MQ  GL P+T TY+ +
Sbjct: 736 NEALICFQSMKDLKCPPNQITYSILINGLCRVRKFNKAFVFWQEMQKLGLKPNTITYTTM 795

Query: 472 INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF 531
           I+ L KAG++  A  LF      G IP+  +YN MI   + A     A  L+ + +  G 
Sbjct: 796 ISGLAKAGNILEASGLFSRFKANGGIPDSASYNAMIEGLSSANKAMDAYALFEETRLKGC 855

Query: 532 EPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRR 563
                T  ++++ L     L++A  V A ++ 
Sbjct: 856 NIHTKTCVVLLDALHKAECLEQAAIVGAVLKE 887



 Score = 43.1 bits (100), Expect = 0.57,   Method: Compositional matrix adjust.
 Identities = 35/160 (21%), Positives = 66/160 (41%), Gaps = 4/160 (2%)

Query: 594 EAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEA 653
           E M  +G  P+      L++  ++  +L +A+ ++Q M     +P+   YT+L+   +E 
Sbjct: 149 EEMSLSGFGPSSNISIELVANCVKSRKLREAFDIIQTMRKFKFRPAFSAYTILIGALSEV 208

Query: 654 RSPYDMGFCHELMAVSGHP--AHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRESKRG 711
           R P  M      M   G+    H+F   +     +G+   D   S L+ M S   ++   
Sbjct: 209 REPDPMLILFHQMQELGYEVNVHLFTTLIRVFAREGR--VDAALSLLDEMKSNSLDADIV 266

Query: 712 LVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAVKEKGM 751
           L +  +D   K+G  + +   +       + PD V    M
Sbjct: 267 LYNVCIDCFGKAGKVDMSWKFFHEMKSHGLMPDDVTYTSM 306


>gi|255561697|ref|XP_002521858.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223538896|gb|EEF40494.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 533

 Score =  162 bits (410), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 106/314 (33%), Positives = 164/314 (52%), Gaps = 4/314 (1%)

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
           + G+  DE TY T+V    +   F     L  +MVR+G  PNVVTY  LI+S  +A  LN
Sbjct: 81  RKGYVPDEVTYNTLVNGYCKEGNFHQALVLHAEMVRNGLSPNVVTYTSLINSMCKAGNLN 140

Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
            A++ F QM V G  P+  TY T+I+  A+ G LD A  +  +M  +G  P   TY+ +I
Sbjct: 141 RAMEFFDQMHVRGLCPNERTYTTIINGFAQQGLLDEAYRVLNEMTRSGFIPSIVTYNALI 200

Query: 473 NCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFE 532
           N     G ++ A  L  +MV +G +P++V+Y+ +I+  A+ +    A ++  +M      
Sbjct: 201 NGHCVLGRMEEAIGLLQDMVGKGVLPDVVSYSTIISGFARNQELDRAFQMKVEMIGKSVL 260

Query: 533 PDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEW 592
           PD VTYS +++ L     L EA  +F EM      PDE  Y  L++ + K G++ KA   
Sbjct: 261 PDAVTYSSLIQGLCEQRRLTEACDMFQEMLTIKLPPDEFTYTTLINAYCKEGDLNKALHL 320

Query: 593 YEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTY-TLLLSCC- 650
           ++ M+Q G  P+  T N L++   +  +  +A  LL  +      PS  TY TL+ +CC 
Sbjct: 321 HDEMIQKGFLPDAVTYNVLINGLNKQARSKEARRLLLKLFYDDSIPSAVTYNTLIENCCN 380

Query: 651 TEARSPYDM--GFC 662
            E +S   +  GFC
Sbjct: 381 IEFKSAVALVKGFC 394



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 95/304 (31%), Positives = 157/304 (51%), Gaps = 2/304 (0%)

Query: 347 FNWLRRQA--GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHS 404
           F +LR     G + +  T+  ++  L R  +    +++L +M R G  P+ VTYN L++ 
Sbjct: 38  FGFLRSMGLKGLEPNLITFNMIINGLCRDGRLKETSEVLVEMSRKGYVPDEVTYNTLVNG 97

Query: 405 YGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPD 464
           Y +    ++AL +  +M   G  P+ VTY +LI+   KAG L+ AM+ + +M   GL P+
Sbjct: 98  YCKEGNFHQALVLHAEMVRNGLSPNVVTYTSLINSMCKAGNLNRAMEFFDQMHVRGLCPN 157

Query: 465 TFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYR 524
             TY+ IIN   + G L  A+++  EM   G IP++VTYN +I         + A+ L +
Sbjct: 158 ERTYTTIINGFAQQGLLDEAYRVLNEMTRSGFIPSIVTYNALINGHCVLGRMEEAIGLLQ 217

Query: 525 DMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAG 584
           DM   G  PD V+YS ++        LD A  +  EM  K+ +PD   Y  L+    +  
Sbjct: 218 DMVGKGVLPDVVSYSTIISGFARNQELDRAFQMKVEMIGKSVLPDAVTYSSLIQGLCEQR 277

Query: 585 NVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYT 644
            + +A + ++ ML   L P+  T  +L++A+ + G L+ A HL   M+  G  P   TY 
Sbjct: 278 RLTEACDMFQEMLTIKLPPDEFTYTTLINAYCKEGDLNKALHLHDEMIQKGFLPDAVTYN 337

Query: 645 LLLS 648
           +L++
Sbjct: 338 VLIN 341



 Score =  146 bits (369), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 97/353 (27%), Positives = 165/353 (46%), Gaps = 9/353 (2%)

Query: 381 KLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIH 440
           +   +M R+GC PNVVTYN +I  Y +    +EA    + M + G EP+ +T+  +I+  
Sbjct: 4   RFFKEMERNGCLPNVVTYNTMIDGYCKLKRTDEAFGFLRSMGLKGLEPNLITFNMIINGL 63

Query: 441 AKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNL 500
            + G L    ++  +M   G  PD  TY+ ++N   K G+   A  L  EMV  G  PN+
Sbjct: 64  CRDGRLKETSEVLVEMSRKGYVPDEVTYNTLVNGYCKEGNFHQALVLHAEMVRNGLSPNV 123

Query: 501 VTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAE 560
           VTY  +I    KA N   A++ +  M   G  P++ TY+ ++      G LDEA  V  E
Sbjct: 124 VTYTSLINSMCKAGNLNRAMEFFDQMHVRGLCPNERTYTTIINGFAQQGLLDEAYRVLNE 183

Query: 561 MRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQ 620
           M R  ++P    Y  L++     G + +A    + M+  G+ P+V + ++++S F R  +
Sbjct: 184 MTRSGFIPSIVTYNALINGHCVLGRMEEAIGLLQDMVGKGVLPDVVSYSTIISGFARNQE 243

Query: 621 LSDAYHLLQGMLNLGLKPSLQTY-TLLLSCCTEARSPYDMGFCHELMAVSGHPAHMFLLS 679
           L  A+ +   M+   + P   TY +L+   C + R         E++ +   P      +
Sbjct: 244 LDRAFQMKVEMIGKSVLPDAVTYSSLIQGLCEQRRLTEACDMFQEMLTIKLPPDEFTYTT 303

Query: 680 MPSPGPDGQNVRDHVGSFLEMMHSEDRESKRGLV-DAVVDFLHKSGLKEEAGS 731
           +        N     G   + +H  D   ++G + DAV   +  +GL ++A S
Sbjct: 304 LI-------NAYCKEGDLNKALHLHDEMIQKGFLPDAVTYNVLINGLNKQARS 349



 Score =  135 bits (341), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 98/331 (29%), Positives = 155/331 (46%), Gaps = 59/331 (17%)

Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLI 402
           A+ FF+ +  + G   +E TYTT++    +        ++L++M R G  P++VTYN LI
Sbjct: 142 AMEFFDQMHVR-GLCPNERTYTTIINGFAQQGLLDEAYRVLNEMTRSGFIPSIVTYNALI 200

Query: 403 HSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAM------------ 450
           + +     + EA+ + + M   G  PD V+Y T+I   A+   LD A             
Sbjct: 201 NGHCVLGRMEEAIGLLQDMVGKGVLPDVVSYSTIISGFARNQELDRAFQMKVEMIGKSVL 260

Query: 451 -----------------------DMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQL 487
                                  DM+++M    L PD FTY+ +IN   K G L  A  L
Sbjct: 261 PDAVTYSSLIQGLCEQRRLTEACDMFQEMLTIKLPPDEFTYTTLINAYCKEGDLNKALHL 320

Query: 488 FCEMVNQGCIPNLVTYNIMI-ALQAKARNYQS---ALKLYRDMQNAGFEPDKVTYSIVME 543
             EM+ +G +P+ VTYN++I  L  +AR+ ++    LKL+ D       P  VTY+ ++E
Sbjct: 321 HDEMIQKGFLPDAVTYNVLINGLNKQARSKEARRLLLKLFYDDS----IPSAVTYNTLIE 376

Query: 544 -------------VLGHC--GYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRK 588
                        V G C  G +DEA+ VF  M  KN  P+E +Y +++    + GNV K
Sbjct: 377 NCCNIEFKSAVALVKGFCMKGLMDEADQVFESMINKNHKPNEAIYNVIIHGHCRIGNVLK 436

Query: 589 AWEWYEAMLQAGLRPNVPTCNSLLSAFLRVG 619
           A++ Y+ M+     P+  T  +L+ A    G
Sbjct: 437 AYKLYKEMVHVDFVPHTVTVLALVKALFTEG 467



 Score =  105 bits (263), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 77/303 (25%), Positives = 126/303 (41%), Gaps = 50/303 (16%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           G   D  +Y+T++    R ++     ++  +M+     P+ VTY+ LI        L EA
Sbjct: 223 GVLPDVVSYSTIISGFARNQELDRAFQMKVEMIGKSVLPDAVTYSSLIQGLCEQRRLTEA 282

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
            D+F++M  +   PD  TY TLI+ + K G L+ A+ ++ +M   G  PD  TY+V+IN 
Sbjct: 283 CDMFQEMLTIKLPPDEFTYTTLINAYCKEGDLNKALHLHDEMIQKGFLPDAVTYNVLING 342

Query: 475 LGK--------------------------------------------------AGHLQAA 484
           L K                                                   G +  A
Sbjct: 343 LNKQARSKEARRLLLKLFYDDSIPSAVTYNTLIENCCNIEFKSAVALVKGFCMKGLMDEA 402

Query: 485 HQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEV 544
            Q+F  M+N+   PN   YN++I    +  N   A KLY++M +  F P  VT   +++ 
Sbjct: 403 DQVFESMINKNHKPNEAIYNVIIHGHCRIGNVLKAYKLYKEMVHVDFVPHTVTVLALVKA 462

Query: 545 LGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPN 604
           L   G   E   V  ++ R   + D  +  +LV++  K GN+   +     M + GL P+
Sbjct: 463 LFTEGMDGELNEVIGDILRSCKLTDAELSKVLVEINQKEGNMDMVFNLLTEMAKDGLIPS 522

Query: 605 VPT 607
             T
Sbjct: 523 TGT 525



 Score = 68.9 bits (167), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 69/268 (25%), Positives = 103/268 (38%), Gaps = 49/268 (18%)

Query: 486 QLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVL 545
           + F EM   GC+PN+VTYN MI    K +    A    R M   G EP+ +T+++++  L
Sbjct: 4   RFFKEMERNGCLPNVVTYNTMIDGYCKLKRTDEAFGFLRSMGLKGLEPNLITFNMIINGL 63

Query: 546 GHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNV 605
              G L E   V  EM RK +V                                   P+ 
Sbjct: 64  CRDGRLKETSEVLVEMSRKGYV-----------------------------------PDE 88

Query: 606 PTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL-SCCTEARSPYDMGFCHE 664
            T N+L++ + + G    A  L   M+  GL P++ TYT L+ S C        M F  +
Sbjct: 89  VTYNTLVNGYCKEGNFHQALVLHAEMVRNGLSPNVVTYTSLINSMCKAGNLNRAMEFFDQ 148

Query: 665 LMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRESKRGLVDAVVDFLHKS- 723
            M V G   +    +    G   Q + D     L  M      ++ G + ++V +     
Sbjct: 149 -MHVRGLCPNERTYTTIINGFAQQGLLDEAYRVLNEM------TRSGFIPSIVTYNALIN 201

Query: 724 -----GLKEEAGSVWEVAAQKNVYPDAV 746
                G  EEA  + +    K V PD V
Sbjct: 202 GHCVLGRMEEAIGLLQDMVGKGVLPDVV 229


>gi|147862640|emb|CAN81487.1| hypothetical protein VITISV_033285 [Vitis vinifera]
          Length = 1024

 Score =  162 bits (410), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 115/395 (29%), Positives = 178/395 (45%), Gaps = 5/395 (1%)

Query: 362 TYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQM 421
           +Y  M+  L   +     NKLL++M   G +PNVV Y+ LI +Y     + EA  +   M
Sbjct: 440 SYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSILIMAYASEGRIEEARRLLDGM 499

Query: 422 QVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHL 481
              G  PD   Y  +I   +KAG ++ A     ++Q  GL PD  T+   I    K G +
Sbjct: 500 SCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKM 559

Query: 482 QAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIV 541
             A + F EM++ G +PN   Y ++I    KA N   AL ++R +   G  PD  T S  
Sbjct: 560 TEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRRLHALGVLPDVQTCSAF 619

Query: 542 MEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGL 601
           +  L   G + EA  VF+E++ K  VPD   Y  L+  + K G V KA+E ++ M   G+
Sbjct: 620 IHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGI 679

Query: 602 RPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTY-TLLLSCCTEARSPYDMG 660
            PN+   N+L+    + G +  A  L  GM   GL+P   TY T++   C          
Sbjct: 680 APNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFS 739

Query: 661 FCHELMAVSGHPAHMFLLSMPSPGPDGQ-NVRDHVGSFLEMMHSEDRESKRGLVDAVVDF 719
             HE M   G   H F+ +    G   + ++   +  F EM+      +     + ++D 
Sbjct: 740 LFHE-MPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGFATTLS--FNTLIDG 796

Query: 720 LHKSGLKEEAGSVWEVAAQKNVYPDAVKEKGMSYW 754
             KS   +EA  +++    K + PD V    +  W
Sbjct: 797 YCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDW 831



 Score =  147 bits (370), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 102/407 (25%), Positives = 183/407 (44%), Gaps = 24/407 (5%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           ++ G K D +  + ++    R      + ++ D MV  G   N++TYN LIH   +   +
Sbjct: 325 QKTGLKPDYNACSALIDGFMREGDIDEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKM 384

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
            +A ++ K M  +GC+P+  T+C LI+ + +   +  A+++  +M+   L P   +Y  +
Sbjct: 385 EKAAEILKGMVTLGCKPNSRTFCLLIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAM 444

Query: 472 INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF 531
           IN L     L  A++L  +M   G  PN+V Y+I+I   A     + A +L   M  +G 
Sbjct: 445 INGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSILIMAYASEGRIEEARRLLDGMSCSGV 504

Query: 532 EPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWE 591
            PD   Y+ ++  L   G ++EA     E++ +   PD   +G  +  + K G + +A +
Sbjct: 505 APDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAK 564

Query: 592 WYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCT 651
           +++ ML  GL PN P    L++   + G L +A  + + +  LG+ P +QT      C  
Sbjct: 565 YFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRRLHALGVLPDVQT------CSA 618

Query: 652 EARSPYDMGFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSE------D 705
                   G   E + V        L+      PD       +  F +    E      D
Sbjct: 619 FIHGLLKNGRVQEALKVFSELKEKGLV------PDVFTYSSLISGFCKQGEVEKAFELHD 672

Query: 706 RESKRGLV------DAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAV 746
               +G+       +A+VD L KSG  + A  +++   +K + PD+V
Sbjct: 673 EMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSV 719



 Score =  139 bits (351), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 98/388 (25%), Positives = 173/388 (44%), Gaps = 32/388 (8%)

Query: 296 NVVESVSRILRQWKWGPLAEEALGNTNYSMDAYQANQVLKQLQDHTVALGFFNWLRRQAG 355
           N  + +S  L+Q  W  +   +   +  + D  +A     Q+ D    L FF W + Q G
Sbjct: 42  NFSQQISDFLKQNNWKTIMVSSHIPSKLNPDVIRAVLHQNQVGDPKRLLDFFYWSQSQMG 101

Query: 356 FKHDEHTYTTMVGILGRARQFGAINKLLDQMVRD-------------------GCQPNVV 396
                 +++ +   L  +  FG  N +L QM+R                    G  P  V
Sbjct: 102 VPQFLDSFSILAVQLCNSELFGLANGVLTQMIRTPYSSSSILDSVLFWFRNYGGSSP--V 159

Query: 397 TYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKM 456
            ++ LI SY R   L+EA +VF   +        +   +L+    K G +++   +Y  M
Sbjct: 160 VFDILIDSYKRMGMLDEAANVFFVAKNDSILISLIRCNSLLKDLLKCGMMELFWKVYNGM 219

Query: 457 QAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNY 516
             A +  D +TY+ ++  L K G L+ A ++  EM  +G  PN   Y+++I    +  + 
Sbjct: 220 LDAKMGFDVYTYTYLVGALCKTGDLRGAKRVLIEMDEKGLNPNEFIYSLVIEGMCQVGDI 279

Query: 517 QSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLL 576
             A++L R M   G  P+  TY+I+   L     ++EA+  F EM++    PD      L
Sbjct: 280 DEAVELKRSMGEKGLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSAL 339

Query: 577 VDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGL 636
           +D + + G++ +     + M+  G+  N+ T N L+    + G++  A  +L+GM+ LG 
Sbjct: 340 IDGFMREGDIDEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMVTLGC 399

Query: 637 KPSLQTYTLLLSCCTEARSPYDMGFCHE 664
           KP+ +T+ LL+            G+C E
Sbjct: 400 KPNSRTFCLLIE-----------GYCRE 416



 Score =  138 bits (348), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 116/478 (24%), Positives = 202/478 (42%), Gaps = 60/478 (12%)

Query: 354 AGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNE 413
           +G   D   Y  ++  L +A +    +  L ++   G +P+ VT+   I  Y +   + E
Sbjct: 502 SGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTE 561

Query: 414 ALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIIN 473
           A   F +M   G  P+   Y  LI+ H KAG L  A+ +++++ A G+ PD  T S  I+
Sbjct: 562 AAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRRLHALGVLPDVQTCSAFIH 621

Query: 474 CLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEP 533
            L K G +Q A ++F E+  +G +P++ TY+ +I+   K    + A +L+ +M   G  P
Sbjct: 622 GLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAP 681

Query: 534 DKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWY 593
           +   Y+ +++ L   G +  A  +F  M  K   PD   Y  ++D + K+ NV +A+  +
Sbjct: 682 NIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLF 741

Query: 594 EAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEA 653
             M   G++P+    N+L+    + G +  A +L + ML  G   +L   TL+   C   
Sbjct: 742 HEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGFATTLSFNTLIDGYCKSC 801

Query: 654 RSPYDMGFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRESKRGLV 713
           +         E++A    P                   DHV                   
Sbjct: 802 KIQEASQLFQEMIAKQIMP-------------------DHVT-----------------Y 825

Query: 714 DAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAVKEKGMSYWLINLHVMSDGTAVIALSRT 773
             V+D+  K+G  EEA  +++   ++N+  D V    + Y    L     G +    S  
Sbjct: 826 TTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVTYTSLMYGYNKL-----GQS----SEV 876

Query: 774 LAWFRKQMLISGVGPSRI-------------DIVTGWGRRSRVTGTS-LVRQAVQELL 817
            A F K M+  GV P  +             ++V  +  R  V G   L +  + +LL
Sbjct: 877 FALFEK-MVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGMLTKGTIHDLL 933



 Score =  136 bits (342), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 111/410 (27%), Positives = 186/410 (45%), Gaps = 37/410 (9%)

Query: 329  QANQVLKQLQDHTVALGFFNWLRRQAGF-----------KHDE----------HTYTTMV 367
            +A +V  +L++  +    F +    +GF            HDE            Y  +V
Sbjct: 631  EALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALV 690

Query: 368  GILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCE 427
              L ++       KL D M   G +P+ VTY+ +I  Y ++  + EA  +F +M   G +
Sbjct: 691  DGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQ 750

Query: 428  PDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQL 487
            P    Y  L+    K G ++ AM+++++M   G +  T +++ +I+   K+  +Q A QL
Sbjct: 751  PHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGFAT-TLSFNTLIDGYCKSCKIQEASQL 809

Query: 488  FCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGH 547
            F EM+ +  +P+ VTY  +I    KA   + A  L+++MQ      D VTY+ +M     
Sbjct: 810  FQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVTYTSLMYGYNK 869

Query: 548  CGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPT 607
             G   E  A+F +M  K   PDE  YGL++    K  N+ +A++  + ++  G+      
Sbjct: 870  LGQSSEVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGMLTKGTI 929

Query: 608  CNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGFCHELMA 667
             + L++A  +   L++A  LL  M  LGLKPSL       +C T  RS ++ G   E   
Sbjct: 930  HDLLITALCKREDLTEASKLLDEMGELGLKPSLA------ACNTLVRSFHEAGKMDEATR 983

Query: 668  VSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRESKRGLVDAVV 717
            V      + L+      PD   + D V   L   +  D E  R L+  +V
Sbjct: 984  VFEGVKSLGLV------PDTTTLIDLVNGNL---NDTDSEDARNLIKQLV 1024



 Score =  128 bits (321), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 102/405 (25%), Positives = 176/405 (43%), Gaps = 24/405 (5%)

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
           + G   +E  Y+ ++  + +        +L   M   G  PN  TY  +     RA  +N
Sbjct: 256 EKGLNPNEFIYSLVIEGMCQVGDIDEAVELKRSMGEKGLVPNTYTYTIITAGLCRAKRMN 315

Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
           EA   F++MQ  G +PD      LID   + G +D  + +   M + G+  +  TY+V+I
Sbjct: 316 EAKLTFEEMQKTGLKPDYNACSALIDGFMREGDIDEVLRIKDVMVSCGIPINLITYNVLI 375

Query: 473 NCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFE 532
           + L K G ++ A ++   MV  GC PN  T+ ++I    +  N   AL+L  +M+     
Sbjct: 376 HGLCKFGKMEKAAEILKGMVTLGCKPNSRTFCLLIEGYCREHNMGRALELLDEMEKRNLV 435

Query: 533 PDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEW 592
           P  V+Y  ++  L HC  L  A  +  +M      P+  VY +L+  +   G + +A   
Sbjct: 436 PSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSILIMAYASEGRIEEARRL 495

Query: 593 YEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL----- 647
            + M  +G+ P++   N+++S   + G++ +A   L  +   GLKP   T+   +     
Sbjct: 496 LDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSK 555

Query: 648 -SCCTEARSPYDMGFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDR 706
               TEA   +D    H LM    +P +  L+          N     G+ +E +    R
Sbjct: 556 TGKMTEAAKYFDEMLDHGLMP--NNPLYTVLI----------NGHFKAGNLMEALSIFRR 603

Query: 707 ESKRGL---VDAVVDFLH---KSGLKEEAGSVWEVAAQKNVYPDA 745
               G+   V     F+H   K+G  +EA  V+    +K + PD 
Sbjct: 604 LHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDV 648



 Score =  123 bits (309), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 83/306 (27%), Positives = 152/306 (49%), Gaps = 6/306 (1%)

Query: 350 LRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRAN 409
           L  + GF  D +TYT +VG L +        ++L +M   G  PN   Y+ +I    +  
Sbjct: 220 LDAKMGF--DVYTYTYLVGALCKTGDLRGAKRVLIEMDEKGLNPNEFIYSLVIEGMCQVG 277

Query: 410 YLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYS 469
            ++EA+++ + M   G  P+  TY  +     +A  ++ A   +++MQ  GL PD    S
Sbjct: 278 DIDEAVELKRSMGEKGLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACS 337

Query: 470 VIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNA 529
            +I+   + G +    ++   MV+ G   NL+TYN++I    K    + A ++ + M   
Sbjct: 338 ALIDGFMREGDIDEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMVTL 397

Query: 530 GFEPDKVTYSIVMEVLGHCGY--LDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVR 587
           G +P+  T+ +++E  G+C    +  A  +  EM ++N VP    YG +++      ++ 
Sbjct: 398 GCKPNSRTFCLLIE--GYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLS 455

Query: 588 KAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
            A +  E M  +GL+PNV   + L+ A+   G++ +A  LL GM   G+ P +  Y  ++
Sbjct: 456 LANKLLEKMTFSGLKPNVVVYSILIMAYASEGRIEEARRLLDGMSCSGVAPDIFCYNAII 515

Query: 648 SCCTEA 653
           SC ++A
Sbjct: 516 SCLSKA 521



 Score = 42.4 bits (98), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 38/170 (22%), Positives = 70/170 (41%)

Query: 501 VTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAE 560
           V ++I+I    +      A  ++   +N       +  + +++ L  CG ++    V+  
Sbjct: 159 VVFDILIDSYKRMGMLDEAANVFFVAKNDSILISLIRCNSLLKDLLKCGMMELFWKVYNG 218

Query: 561 MRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQ 620
           M       D   Y  LV    K G++R A      M + GL PN    + ++    +VG 
Sbjct: 219 MLDAKMGFDVYTYTYLVGALCKTGDLRGAKRVLIEMDEKGLNPNEFIYSLVIEGMCQVGD 278

Query: 621 LSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGFCHELMAVSG 670
           + +A  L + M   GL P+  TYT++ +    A+   +     E M  +G
Sbjct: 279 IDEAVELKRSMGEKGLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTG 328


>gi|359487666|ref|XP_002277942.2| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09820-like [Vitis vinifera]
          Length = 609

 Score =  162 bits (410), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 110/363 (30%), Positives = 173/363 (47%), Gaps = 29/363 (7%)

Query: 291 FASTGNVVESVSRILRQWKWGPLAEEALGNTNYSMDAY-------QANQVLKQLQDHTVA 343
           F   G+VVE     ++ W + P    ++   N  +D Y       +A+ +LK++    + 
Sbjct: 245 FQKAGDVVED----MKAWGFSP----SVITYNTIIDGYCKAGKMFKADALLKEMVAKRI- 295

Query: 344 LGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIH 403
                          +E T+  ++    R     A  K+ ++M R G QPNVVTYN LI+
Sbjct: 296 -------------HPNEITFNILIDGFCRDENVTAAKKVFEEMQRQGLQPNVVTYNSLIN 342

Query: 404 SYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSP 463
                  L+EAL +  +M  +G +P+ VTY  LI+   K   L  A +M   +   GL+P
Sbjct: 343 GLCSNGKLDEALGLQDKMSGMGLKPNVVTYNALINGFCKKKMLKEAREMLDDIGKRGLAP 402

Query: 464 DTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLY 523
           +  T++ +I+  GKAG +  A  L   M++ G  PN+ TYN +I    +  N + A KL 
Sbjct: 403 NVITFNTLIDAYGKAGRMDDAFLLRSMMLDTGVCPNVSTYNCLIVGFCREGNVKEARKLA 462

Query: 524 RDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKA 583
           ++M+  G + D VTY+I+++ L   G   +A  +  EM      P    Y  L+D + + 
Sbjct: 463 KEMEGNGLKADLVTYNILVDALCKKGETRKAVRLLDEMFEVGLNPSHLTYNALIDGYFRE 522

Query: 584 GNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTY 643
           GN   A      M + G R N+ T N L+  F   G+L +A  LL  ML  GL P+  TY
Sbjct: 523 GNSTAALNVRTLMEKKGRRANIVTYNVLIKGFCNKGKLEEANRLLNEMLEKGLIPNRTTY 582

Query: 644 TLL 646
            +L
Sbjct: 583 DIL 585



 Score =  153 bits (386), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 94/322 (29%), Positives = 162/322 (50%), Gaps = 1/322 (0%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           GF+    +   M+  L +  + G +  +  +M+R     NVVT++ +I+   +     +A
Sbjct: 189 GFRLSALSCNPMLVSLVKEGRIGVVESVYKEMIRRRIGVNVVTFDVVINGLCKVGKFQKA 248

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
            DV + M+  G  P  +TY T+ID + KAG +  A  + K+M A  + P+  T++++I+ 
Sbjct: 249 GDVVEDMKAWGFSPSVITYNTIIDGYCKAGKMFKADALLKEMVAKRIHPNEITFNILIDG 308

Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPD 534
             +  ++ AA ++F EM  QG  PN+VTYN +I           AL L   M   G +P+
Sbjct: 309 FCRDENVTAAKKVFEEMQRQGLQPNVVTYNSLINGLCSNGKLDEALGLQDKMSGMGLKPN 368

Query: 535 KVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYE 594
            VTY+ ++        L EA  +  ++ ++   P+   +  L+D +GKAG +  A+    
Sbjct: 369 VVTYNALINGFCKKKMLKEAREMLDDIGKRGLAPNVITFNTLIDAYGKAGRMDDAFLLRS 428

Query: 595 AMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL-SCCTEA 653
            ML  G+ PNV T N L+  F R G + +A  L + M   GLK  L TY +L+ + C + 
Sbjct: 429 MMLDTGVCPNVSTYNCLIVGFCREGNVKEARKLAKEMEGNGLKADLVTYNILVDALCKKG 488

Query: 654 RSPYDMGFCHELMAVSGHPAHM 675
            +   +    E+  V  +P+H+
Sbjct: 489 ETRKAVRLLDEMFEVGLNPSHL 510



 Score =  145 bits (367), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 95/312 (30%), Positives = 151/312 (48%), Gaps = 15/312 (4%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           GF     TY T++    +A +    + LL +MV     PN +T+N LI  + R   +  A
Sbjct: 259 GFSPSVITYNTIIDGYCKAGKMFKADALLKEMVAKRIHPNEITFNILIDGFCRDENVTAA 318

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
             VF++MQ  G +P+ VTY +LI+     G LD A+ +  KM   GL P+  TY+ +IN 
Sbjct: 319 KKVFEEMQRQGLQPNVVTYNSLINGLCSNGKLDEALGLQDKMSGMGLKPNVVTYNALING 378

Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPD 534
             K   L+ A ++  ++  +G  PN++T+N +I    KA     A  L   M + G  P+
Sbjct: 379 FCKKKMLKEAREMLDDIGKRGLAPNVITFNTLIDAYGKAGRMDDAFLLRSMMLDTGVCPN 438

Query: 535 KVTYSIVMEVLGHC--GYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEW 592
             TY+ +  ++G C  G + EA  +  EM       D   Y +LVD   K G  RKA   
Sbjct: 439 VSTYNCL--IVGFCREGNVKEARKLAKEMEGNGLKADLVTYNILVDALCKKGETRKAVRL 496

Query: 593 YEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTE 652
            + M + GL P+  T N+L+  + R G  + A ++   M   G + ++ TY +L+     
Sbjct: 497 LDEMFEVGLNPSHLTYNALIDGYFREGNSTAALNVRTLMEKKGRRANIVTYNVLIK---- 552

Query: 653 ARSPYDMGFCHE 664
                  GFC++
Sbjct: 553 -------GFCNK 557



 Score =  136 bits (342), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 91/333 (27%), Positives = 164/333 (49%), Gaps = 6/333 (1%)

Query: 319 GNTNYSMDAYQANQVL----KQLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRAR 374
           G+  + + A   N +L    K+ +   V   +   +RR+ G   +  T+  ++  L +  
Sbjct: 186 GDYGFRLSALSCNPMLVSLVKEGRIGVVESVYKEMIRRRIGV--NVVTFDVVINGLCKVG 243

Query: 375 QFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYC 434
           +F     +++ M   G  P+V+TYN +I  Y +A  + +A  + K+M      P+ +T+ 
Sbjct: 244 KFQKAGDVVEDMKAWGFSPSVITYNTIIDGYCKAGKMFKADALLKEMVAKRIHPNEITFN 303

Query: 435 TLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQ 494
            LID   +   +  A  ++++MQ  GL P+  TY+ +IN L   G L  A  L  +M   
Sbjct: 304 ILIDGFCRDENVTAAKKVFEEMQRQGLQPNVVTYNSLINGLCSNGKLDEALGLQDKMSGM 363

Query: 495 GCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEA 554
           G  PN+VTYN +I    K +  + A ++  D+   G  P+ +T++ +++  G  G +D+A
Sbjct: 364 GLKPNVVTYNALINGFCKKKMLKEAREMLDDIGKRGLAPNVITFNTLIDAYGKAGRMDDA 423

Query: 555 EAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSA 614
             + + M      P+   Y  L+  + + GNV++A +  + M   GL+ ++ T N L+ A
Sbjct: 424 FLLRSMMLDTGVCPNVSTYNCLIVGFCREGNVKEARKLAKEMEGNGLKADLVTYNILVDA 483

Query: 615 FLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
             + G+   A  LL  M  +GL PS  TY  L+
Sbjct: 484 LCKKGETRKAVRLLDEMFEVGLNPSHLTYNALI 516



 Score =  126 bits (317), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 102/413 (24%), Positives = 190/413 (46%), Gaps = 53/413 (12%)

Query: 266 CVSERFSKPSREMKIPAGLAPFS--RHFASTGNV----VESVSRILRQWKWGPLAEEALG 319
           C+S RF  PS + K+     PFS      +T N       ++S+++ +  W  L +  + 
Sbjct: 13  CLSTRF--PSLDPKLNNTKTPFSSPNSTYTTPNSHTFDTPTISQLIAKQHWSKL-KTIVK 69

Query: 320 NTNYSMDAYQANQVLKQLQDHT----VALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQ 375
            TN S        +L+ L +      + L +F W +++ G  H+   +  ++ +L  A+ 
Sbjct: 70  ETNPS-------SLLQHLFNSEAQPDLILCYFKWTQKEFGAIHNVEQFCRLLHLLANAKN 122

Query: 376 FGAINKLLDQMVRDGCQPNVVTYNRL--IHSYGRANYLNEALDVFKQMQVVGCEPDRVTY 433
           +  I  LLD   ++    N   ++ L  + S+G AN                     +  
Sbjct: 123 YNKIRALLDSFAKNAHYSNSTIFHSLSVLGSWGCAN--------------------SIIV 162

Query: 434 CTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVN 493
             L+  + K G +D+A++ + +    G      + + ++  L K G +     ++ EM+ 
Sbjct: 163 DMLVWAYVKNGEMDLALEGFDRAGDYGFRLSALSCNPMLVSLVKEGRIGVVESVYKEMIR 222

Query: 494 QGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDE 553
           +    N+VT++++I    K   +Q A  +  DM+  GF P  +TY+ +++     G + +
Sbjct: 223 RRIGVNVVTFDVVINGLCKVGKFQKAGDVVEDMKAWGFSPSVITYNTIIDGYCKAGKMFK 282

Query: 554 AEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLS 613
           A+A+  EM  K   P+E  + +L+D + +  NV  A + +E M + GL+PNV T NSL++
Sbjct: 283 ADALLKEMVAKRIHPNEITFNILIDGFCRDENVTAAKKVFEEMQRQGLQPNVVTYNSLIN 342

Query: 614 AFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGFCHELM 666
                G+L +A  L   M  +GLKP++ TY  L++           GFC + M
Sbjct: 343 GLCSNGKLDEALGLQDKMSGMGLKPNVVTYNALIN-----------GFCKKKM 384



 Score = 90.5 bits (223), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 62/235 (26%), Positives = 112/235 (47%), Gaps = 7/235 (2%)

Query: 322 NYSMDAYQANQVLKQLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINK 381
           N  ++ +   ++LK+ ++    +G       + G   +  T+ T++   G+A +      
Sbjct: 373 NALINGFCKKKMLKEAREMLDDIG-------KRGLAPNVITFNTLIDAYGKAGRMDDAFL 425

Query: 382 LLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHA 441
           L   M+  G  PNV TYN LI  + R   + EA  + K+M+  G + D VTY  L+D   
Sbjct: 426 LRSMMLDTGVCPNVSTYNCLIVGFCREGNVKEARKLAKEMEGNGLKADLVTYNILVDALC 485

Query: 442 KAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLV 501
           K G    A+ +  +M   GL+P   TY+ +I+   + G+  AA  +   M  +G   N+V
Sbjct: 486 KKGETRKAVRLLDEMFEVGLNPSHLTYNALIDGYFREGNSTAALNVRTLMEKKGRRANIV 545

Query: 502 TYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEA 556
           TYN++I         + A +L  +M   G  P++ TY I+ + +   G++ + + 
Sbjct: 546 TYNVLIKGFCNKGKLEEANRLLNEMLEKGLIPNRTTYDILRDEMMEKGFIPDIDG 600


>gi|302809589|ref|XP_002986487.1| hypothetical protein SELMODRAFT_182414 [Selaginella moellendorffii]
 gi|300145670|gb|EFJ12344.1| hypothetical protein SELMODRAFT_182414 [Selaginella moellendorffii]
          Length = 773

 Score =  162 bits (410), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 139/533 (26%), Positives = 218/533 (40%), Gaps = 48/533 (9%)

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
           ++G   D  TY ++V     + Q G + +LL +M  +G  P++  YN LI +Y  A  ++
Sbjct: 216 ESGVVADAVTYKSLVDTFAGSNQLGRVEELLREMEDEGNSPDIAGYNSLIEAYADAGNVH 275

Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
            A  VFKQMQ  GC PD  TY TL+ I+   G  +    ++  M+     P   TY+ +I
Sbjct: 276 GAAGVFKQMQRGGCAPDVETYSTLLRIYGNQGCFEQVRSLFSDMKELSTPPTVATYNSLI 335

Query: 473 NCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFE 532
              G+ G+ Q +  LF +MV+ G  P+  TY+ ++++  +    + A K+++ M      
Sbjct: 336 QVFGEGGYFQESINLFHDMVDSGVKPDDATYSALLSVCGRGGLTREAAKIHQHMLTNEST 395

Query: 533 PDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEW 592
           P     + ++   G      +A   +  +R     P    Y  L+  + K G   +A   
Sbjct: 396 PSLEASAGLISSYGKMAMYKDALVSYYRIREAGLDPQVSAYDALIQGYAKGGLYVEAGST 455

Query: 593 YEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYH--------------------LLQGML 632
             AM +AG +  V + NS++ A+ +VG   +A                      LL    
Sbjct: 456 LYAMNKAGFQAPVSSVNSVMEAYSKVGLHDEALEFFSELQQKEGSEVDERTHETLLGVYC 515

Query: 633 NLGL----------------KPSLQTYTLLLSCCTEARSPYDMG--FCHELMAVSGHPAH 674
           ++GL                 P  + Y LLLS C   RS +D       E++A  G   H
Sbjct: 516 DMGLLEEAKEEFVIIKETSKVPGARVYCLLLSLCVR-RSKWDYATQLLDEMIAAGG--LH 572

Query: 675 MFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRESKRGLVDAVVDFLHKSGLKEEAGSVWE 734
             ++ +     D       V    + +   D E      +A+V+ L     K  A  V  
Sbjct: 573 QVVVGIVRGTYDADFSWQVVEYAFDGLKLRDMEESMDFYNALVELLVYCNQKARAARVLA 632

Query: 735 VAAQKNVYPDAVKEKGMSYWLINLHVMSDGTAVIALSRTLAWFRKQMLISGVGPSRIDIV 794
            A Q+  +P+A   K    W +N+H MS G  V ALS    WF        + P    IV
Sbjct: 633 DAMQRGAFPEAFI-KTRRVWSVNVHRMSAGATVTALS---TWFNDLQECEKL-PFMTSIV 687

Query: 795 TGWG--RRSRVTGTSLVRQAVQELLHMFSFPFFTENGNSGCFVGCGEPLNKWL 845
              G     R      V + VQ  L  ++ P  T + N G  V  GE L  WL
Sbjct: 688 VSCGDIEDHRKVEDLPVAKVVQAFLKHYAAPLETASWNEGRIVCKGEALKPWL 740



 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 113/436 (25%), Positives = 197/436 (45%), Gaps = 35/436 (8%)

Query: 319 GNTNYSMDAYQANQVLKQLQ----------DHTVALGFFNWLRRQAGFKHDEHTYTTMVG 368
           G+    MD Y++   ++             D   AL  F +++RQ   K  EH YT M+G
Sbjct: 31  GSVTRCMDLYRSKLTMQDFSLIFREFAARSDWHRALRLFKYMQRQQWCKPTEHIYTIMIG 90

Query: 369 ILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEP 428
           I+GR       +++ + M  +  + NV  +  LI++YGR      +L +  +M+    EP
Sbjct: 91  IMGREGLLEKCSEIFEDMPENDVKWNVYAFTALINAYGRNGQYEASLHLLARMKKERVEP 150

Query: 429 DRVTYCTLIDIHAKAGF-LDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQL 487
           + +TY T+++  +K G   +  ++++ +M+  G+ PD  TY+ +++     G ++ A  +
Sbjct: 151 NLITYNTVLNACSKGGLDWEGLLNLFAQMRHEGIQPDLITYNTLLSACSSRGLVEQAAMV 210

Query: 488 FCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGH 547
           F  M   G + + VTY  ++   A +       +L R+M++ G  PD   Y+ ++E    
Sbjct: 211 FKTMNESGVVADAVTYKSLVDTFAGSNQLGRVEELLREMEDEGNSPDIAGYNSLIEAYAD 270

Query: 548 CGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPT 607
            G +  A  VF +M+R    PD   Y  L+ ++G  G   +    +  M +    P V T
Sbjct: 271 AGNVHGAAGVFKQMQRGGCAPDVETYSTLLRIYGNQGCFEQVRSLFSDMKELSTPPTVAT 330

Query: 608 CNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGFCHELMA 667
            NSL+  F   G   ++ +L   M++ G+KP   TY+ LLS C         G   E   
Sbjct: 331 YNSLIQVFGEGGYFQESINLFHDMVDSGVKPDDATYSALLSVCGRG------GLTREAAK 384

Query: 668 VSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSED------RESKRGL------VDA 715
           +     H  +L+  S  P  +     + S+ +M   +D      R  + GL       DA
Sbjct: 385 I-----HQHMLTNEST-PSLEASAGLISSYGKMAMYKDALVSYYRIREAGLDPQVSAYDA 438

Query: 716 VVDFLHKSGLKEEAGS 731
           ++    K GL  EAGS
Sbjct: 439 LIQGYAKGGLYVEAGS 454


>gi|297820746|ref|XP_002878256.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297324094|gb|EFH54515.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 582

 Score =  162 bits (409), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 93/349 (26%), Positives = 174/349 (49%), Gaps = 6/349 (1%)

Query: 334 LKQLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQP 393
            KQL+   +      WLR Q  +   E  +  ++   G+   F    ++L  + + G  P
Sbjct: 113 FKQLKKWNLVSEILEWLRYQNWWNFSEMDFLMLITAYGKLGNFNGAERVLSVLSKMGSSP 172

Query: 394 NVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMY 453
           NV++Y  L+ SYGR    N A  +F++MQ  G EP  VTY  ++    +      A +++
Sbjct: 173 NVISYTALMESYGRGGKCNNAEAIFRRMQSSGPEPSAVTYQIILKTFVEGDKFKEAEEVF 232

Query: 454 KKM---QAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQ 510
           + +   + + L PD   Y ++I    KAG+   A ++F  MV +G   + VTYN +++ +
Sbjct: 233 ETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYDKARKVFSSMVGKGVPQSTVTYNSLMSFE 292

Query: 511 AKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDE 570
               NY+   K+Y  MQ +G +PD V+Y+++++  G     +EA +VF EM      P  
Sbjct: 293 T---NYKEVSKIYDQMQRSGIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTH 349

Query: 571 PVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQG 630
             Y +L+D +  +G V +A   +++M +  + P++ +  ++LSA++    +  A    + 
Sbjct: 350 KAYNILLDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKR 409

Query: 631 MLNLGLKPSLQTYTLLLSCCTEARSPYDMGFCHELMAVSGHPAHMFLLS 679
           +   G +P++ TY  ++    +A     M   +E M +SG  A+  +L+
Sbjct: 410 IKVDGFEPNIVTYGTMIKGYAKANDVEKMMEVYEKMRLSGIKANQTILT 458



 Score =  124 bits (312), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 70/256 (27%), Positives = 128/256 (50%), Gaps = 13/256 (5%)

Query: 349 WLRRQAG-FKHDEHTYTTMVG------------ILGRARQFGAINKLLDQMVRDGCQPNV 395
           ++ ++AG +      +++MVG            ++     +  ++K+ DQM R G QP+V
Sbjct: 255 YMYKKAGNYDKARKVFSSMVGKGVPQSTVTYNSLMSFETNYKEVSKIYDQMQRSGIQPDV 314

Query: 396 VTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKK 455
           V+Y  LI +YGRA    EAL VF++M   G  P    Y  L+D  A +G ++ A  ++K 
Sbjct: 315 VSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKS 374

Query: 456 MQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARN 515
           M+   + PD ++Y+ +++    A  ++ A + F  +   G  PN+VTY  MI   AKA +
Sbjct: 375 MRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTMIKGYAKAND 434

Query: 516 YQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGL 575
            +  +++Y  M+ +G + ++   + +M+  G C     A   + EM      PD+    +
Sbjct: 435 VEKMMEVYEKMRLSGIKANQTILTTIMDASGRCKDFGSALGWYKEMESCGVPPDQKAKNV 494

Query: 576 LVDLWGKAGNVRKAWE 591
           L+ L+     + +A E
Sbjct: 495 LLSLYSTQDELDEAKE 510



 Score =  120 bits (300), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 70/276 (25%), Positives = 135/276 (48%), Gaps = 3/276 (1%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           +++  K D+  Y  M+ +  +A  +    K+   MV  G   + VTYN L+      NY 
Sbjct: 239 KKSPLKPDQKMYHMMIYMYKKAGNYDKARKVFSSMVGKGVPQSTVTYNSLMSF--ETNY- 295

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
            E   ++ QMQ  G +PD V+Y  LI  + +A   + A+ ++++M  AG+ P    Y+++
Sbjct: 296 KEVSKIYDQMQRSGIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNIL 355

Query: 472 INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF 531
           ++    +G ++ A  +F  M      P+L +Y  M++    A + + A K ++ ++  GF
Sbjct: 356 LDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGF 415

Query: 532 EPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWE 591
           EP+ VTY  +++       +++   V+ +MR      ++ +   ++D  G+  +   A  
Sbjct: 416 EPNIVTYGTMIKGYAKANDVEKMMEVYEKMRLSGIKANQTILTTIMDASGRCKDFGSALG 475

Query: 592 WYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHL 627
           WY+ M   G+ P+    N LLS +    +L +A  L
Sbjct: 476 WYKEMESCGVPPDQKAKNVLLSLYSTQDELDEAKEL 511



 Score = 91.7 bits (226), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 65/280 (23%), Positives = 128/280 (45%), Gaps = 41/280 (14%)

Query: 468 YSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQ 527
           + ++I   GK G+   A ++   +   G  PN+++Y  ++    +     +A  ++R MQ
Sbjct: 142 FLMLITAYGKLGNFNGAERVLSVLSKMGSSPNVISYTALMESYGRGGKCNNAEAIFRRMQ 201

Query: 528 NAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEM---RRKNWVPDEPVYGLLVDLWGKAG 584
           ++G EP  VTY I+++         EAE VF  +   ++    PD+ +Y +++ ++ KAG
Sbjct: 202 SSGPEPSAVTYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAG 261

Query: 585 NVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYT 644
           N  KA + + +M+  G+  +  T NSL+S      ++S  Y  +Q     G++P + +Y 
Sbjct: 262 NYDKARKVFSSMVGKGVPQSTVTYNSLMSFETNYKEVSKIYDQMQ---RSGIQPDVVSYA 318

Query: 645 LLLSCCTEARSPYDMGFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSE 704
           LL+     AR         E ++V                            F EM+ + 
Sbjct: 319 LLIKAYGRARRE------EEALSV----------------------------FEEMLDAG 344

Query: 705 DRESKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPD 744
            R + +   + ++D    SG+ E+A +V++   +  ++PD
Sbjct: 345 VRPTHKAY-NILLDAFAISGMVEQAKTVFKSMRRDRIFPD 383


>gi|297795313|ref|XP_002865541.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297311376|gb|EFH41800.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 711

 Score =  162 bits (409), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 92/316 (29%), Positives = 157/316 (49%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           G   DEHTY+ ++     A ++ +   +L +M     QPN   ++RL+  Y       + 
Sbjct: 371 GVSPDEHTYSLLIDAYVNAGRWESARIVLKEMETGDVQPNSFVFSRLLAGYRDRGEWQKT 430

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
             V K+M+ +G +PDR  Y  +ID   K   LD AM  + +M + G+ PD  T++ +I+C
Sbjct: 431 FQVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDC 490

Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPD 534
             K G    A ++F  M  +GC+P   TYNIMI        +    +L   M++ G  P+
Sbjct: 491 HCKHGRHIVAEEMFEAMERRGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPN 550

Query: 535 KVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYE 594
            VT++ +++V G  G  ++A     EM+     P   +Y  L++ + + G   +A   + 
Sbjct: 551 VVTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFR 610

Query: 595 AMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEAR 654
            M   GL+P++   NSL++AF    + ++A+ +LQ M   G+KP + TYT L+       
Sbjct: 611 VMTSDGLKPSLLALNSLINAFGEDRRDAEAFAVLQYMKENGVKPDVVTYTTLMKALIRVD 670

Query: 655 SPYDMGFCHELMAVSG 670
               +   +E M +SG
Sbjct: 671 KFQKVPGVYEEMIMSG 686



 Score =  134 bits (336), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 88/331 (26%), Positives = 158/331 (47%), Gaps = 21/331 (6%)

Query: 325 MDAY-------QANQVLKQLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFG 377
           +DAY        A  VLK+++   V    F + R  AG++       T            
Sbjct: 383 IDAYVNAGRWESARIVLKEMETGDVQPNSFVFSRLLAGYRDRGEWQKTF----------- 431

Query: 378 AINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLI 437
              ++L +M   G +P+   YN +I ++G+ N L+ A+  F +M   G EPDRVT+ TLI
Sbjct: 432 ---QVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLI 488

Query: 438 DIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCI 497
           D H K G   VA +M++ M+  G  P   TY+++IN  G         +L  +M +QG +
Sbjct: 489 DCHCKHGRHIVAEEMFEAMERRGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGIL 548

Query: 498 PNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAV 557
           PN+VT+  ++ +  K+  +  A++   +M++ G +P    Y+ ++      G  ++A   
Sbjct: 549 PNVVTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNA 608

Query: 558 FAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLR 617
           F  M      P       L++ +G+     +A+   + M + G++P+V T  +L+ A +R
Sbjct: 609 FRVMTSDGLKPSLLALNSLINAFGEDRRDAEAFAVLQYMKENGVKPDVVTYTTLMKALIR 668

Query: 618 VGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
           V +      + + M+  G KP  +  ++L S
Sbjct: 669 VDKFQKVPGVYEEMIMSGCKPDRKARSMLRS 699



 Score =  125 bits (314), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 81/303 (26%), Positives = 145/303 (47%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           RQ+G K     Y  ++    +         ++ +M + G  P+  TY+ LI +Y  A   
Sbjct: 333 RQSGIKPRTKAYNALLKGYVKTGPLKDAELMVSEMEKRGVSPDEHTYSLLIDAYVNAGRW 392

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
             A  V K+M+    +P+   +  L+  +   G       + K+M++ G+ PD   Y+V+
Sbjct: 393 ESARIVLKEMETGDVQPNSFVFSRLLAGYRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVV 452

Query: 472 INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF 531
           I+  GK   L  A   F  M+++G  P+ VT+N +I    K   +  A +++  M+  G 
Sbjct: 453 IDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRGC 512

Query: 532 EPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWE 591
            P   TY+I++   G     D+ + +  +M+ +  +P+   +  LVD++GK+G    A E
Sbjct: 513 LPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIE 572

Query: 592 WYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCT 651
             E M   GL+P+    N+L++A+ + G    A +  + M + GLKPSL     L++   
Sbjct: 573 CLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRVMTSDGLKPSLLALNSLINAFG 632

Query: 652 EAR 654
           E R
Sbjct: 633 EDR 635



 Score =  123 bits (308), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 78/296 (26%), Positives = 139/296 (46%), Gaps = 4/296 (1%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           G      T  +++  L  + +      L +++ + G +P    YN L+  Y +   L +A
Sbjct: 301 GLSAKTATLVSIISALANSGRTLEAEALFEELRQSGIKPRTKAYNALLKGYVKTGPLKDA 360

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
             +  +M+  G  PD  TY  LID +  AG  + A  + K+M+   + P++F +S ++  
Sbjct: 361 ELMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWESARIVLKEMETGDVQPNSFVFSRLLAG 420

Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPD 534
               G  Q   Q+  EM + G  P+   YN++I    K      A+  +  M + G EPD
Sbjct: 421 YRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPD 480

Query: 535 KVTYSIVMEVLGHC--GYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEW 592
           +VT++ +++   HC  G    AE +F  M R+  +P    Y ++++ +G           
Sbjct: 481 RVTWNTLIDC--HCKHGRHIVAEEMFEAMERRGCLPCATTYNIMINSYGDQERWDDMKRL 538

Query: 593 YEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
              M   G+ PNV T  +L+  + + G+ +DA   L+ M ++GLKPS   Y  L++
Sbjct: 539 LGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKPSSTMYNALIN 594



 Score =  110 bits (276), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 101/476 (21%), Positives = 197/476 (41%), Gaps = 47/476 (9%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAI--NKLLDQMVRDGCQPNVVTYNRLIHSYGRAN 409
           RQ G++ D   Y+ ++  L R  +  ++   +L  ++ RD  + +V   N +I  + ++ 
Sbjct: 226 RQDGYQSDFVNYSLVIQSLTRCNKIDSVMLQRLYKEIERDKLELDVQLVNDIIMGFAKSG 285

Query: 410 YLNEALDV-----------------------------------FKQMQVVGCEPDRVTYC 434
             + AL +                                   F++++  G +P    Y 
Sbjct: 286 DPSRALQLLGMAQATGLSAKTATLVSIISALANSGRTLEAEALFEELRQSGIKPRTKAYN 345

Query: 435 TLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQ 494
            L+  + K G L  A  M  +M+  G+SPD  TYS++I+    AG  ++A  +  EM   
Sbjct: 346 ALLKGYVKTGPLKDAELMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWESARIVLKEMETG 405

Query: 495 GCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEA 554
              PN   ++ ++A       +Q   ++ ++M++ G +PD+  Y++V++  G    LD A
Sbjct: 406 DVQPNSFVFSRLLAGYRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHA 465

Query: 555 EAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSA 614
              F  M  +   PD   +  L+D   K G    A E +EAM + G  P   T N ++++
Sbjct: 466 MTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRGCLPCATTYNIMINS 525

Query: 615 FLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGFCHELMAVSGHPAH 674
           +    +  D   LL  M + G+ P++ T+T L+    ++    D   C E M   G    
Sbjct: 526 YGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKPS 585

Query: 675 MFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRESKRGLVDAVVDFLHKSGLKEEAGSVWE 734
             + +        + + +   +   +M S+  +     ++++++   +     EA +V +
Sbjct: 586 STMYNALINAYAQRGLSEQAVNAFRVMTSDGLKPSLLALNSLINAFGEDRRDAEAFAVLQ 645

Query: 735 VAAQKNVYPDAVKEKGMSYWLINLHVMSDGTAVIALSRTLAWFRKQMLISGVGPSR 790
              +  V PD V    +   LI +        V           ++M++SG  P R
Sbjct: 646 YMKENGVKPDVVTYTTLMKALIRVDKFQKVPGVY----------EEMIMSGCKPDR 691



 Score =  107 bits (266), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 77/296 (26%), Positives = 133/296 (44%), Gaps = 3/296 (1%)

Query: 362 TYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEAL--DVFK 419
           TY  ++G   R         L+ +M +DG Q + V Y+ +I S  R N ++  +   ++K
Sbjct: 201 TYNALIGACARNNDIEKALNLISRMRQDGYQSDFVNYSLVIQSLTRCNKIDSVMLQRLYK 260

Query: 420 QMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAG 479
           +++    E D      +I   AK+G    A+ +    QA GLS  T T   II+ L  +G
Sbjct: 261 EIERDKLELDVQLVNDIIMGFAKSGDPSRALQLLGMAQATGLSAKTATLVSIISALANSG 320

Query: 480 HLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYS 539
               A  LF E+   G  P    YN ++    K    + A  +  +M+  G  PD+ TYS
Sbjct: 321 RTLEAEALFEELRQSGIKPRTKAYNALLKGYVKTGPLKDAELMVSEMEKRGVSPDEHTYS 380

Query: 540 IVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQA 599
           ++++   + G  + A  V  EM   +  P+  V+  L+  +   G  +K ++  + M   
Sbjct: 381 LLIDAYVNAGRWESARIVLKEMETGDVQPNSFVFSRLLAGYRDRGEWQKTFQVLKEMKSI 440

Query: 600 GLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSC-CTEAR 654
           G++P+    N ++  F +   L  A      ML+ G++P   T+  L+ C C   R
Sbjct: 441 GVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGR 496



 Score =  100 bits (249), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 85/338 (25%), Positives = 154/338 (45%), Gaps = 17/338 (5%)

Query: 333 VLKQLQDHTVALGF----FNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVR 388
           ++K L   T +LG      +WL++       E  Y+ ++  LGR+ +      LL Q  +
Sbjct: 138 LIKSLCSSTSSLGLAYAVVSWLQKHNLCFSYELLYSILIHALGRSEKLYEAF-LLSQ--K 194

Query: 389 DGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDV 448
               P  +TYN LI +  R N + +AL++  +M+  G + D V Y  +I    +   +D 
Sbjct: 195 QTLTP--LTYNALIGACARNNDIEKALNLISRMRQDGYQSDFVNYSLVIQSLTRCNKIDS 252

Query: 449 AM--DMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIM 506
            M   +YK+++   L  D    + II    K+G    A QL       G      T   +
Sbjct: 253 VMLQRLYKEIERDKLELDVQLVNDIIMGFAKSGDPSRALQLLGMAQATGLSAKTATLVSI 312

Query: 507 IALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNW 566
           I+  A +     A  L+ +++ +G +P    Y+ +++     G L +AE + +EM ++  
Sbjct: 313 ISALANSGRTLEAEALFEELRQSGIKPRTKAYNALLKGYVKTGPLKDAELMVSEMEKRGV 372

Query: 567 VPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYH 626
            PDE  Y LL+D +  AG    A    + M    ++PN    + LL+ +   G+    + 
Sbjct: 373 SPDEHTYSLLIDAYVNAGRWESARIVLKEMETGDVQPNSFVFSRLLAGYRDRGEWQKTFQ 432

Query: 627 LLQGMLNLGLKPSLQTYTLLL------SCCTEARSPYD 658
           +L+ M ++G+KP  Q Y +++      +C   A + +D
Sbjct: 433 VLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHAMTTFD 470



 Score = 99.4 bits (246), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 56/208 (26%), Positives = 102/208 (49%), Gaps = 1/208 (0%)

Query: 340 HTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYN 399
           H VA   F  + R+ G      TY  M+   G   ++  + +LL +M   G  PNVVT+ 
Sbjct: 497 HIVAEEMFEAMERR-GCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHT 555

Query: 400 RLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAA 459
            L+  YG++   N+A++  ++M+ VG +P    Y  LI+ +A+ G  + A++ ++ M + 
Sbjct: 556 TLVDVYGKSGRFNDAIECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRVMTSD 615

Query: 460 GLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSA 519
           GL P     + +IN  G+      A  +   M   G  P++VTY  ++    +   +Q  
Sbjct: 616 GLKPSLLALNSLINAFGEDRRDAEAFAVLQYMKENGVKPDVVTYTTLMKALIRVDKFQKV 675

Query: 520 LKLYRDMQNAGFEPDKVTYSIVMEVLGH 547
             +Y +M  +G +PD+   S++   L +
Sbjct: 676 PGVYEEMIMSGCKPDRKARSMLRSALRY 703


>gi|225439358|ref|XP_002269283.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g06400, mitochondrial-like [Vitis vinifera]
          Length = 1048

 Score =  162 bits (409), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 95/345 (27%), Positives = 176/345 (51%), Gaps = 6/345 (1%)

Query: 297 VVESVSRILRQWKWGPLAEEALGNTNYSMDAYQANQVLKQ-LQDHTVALGFFNWLRRQAG 355
           +V+ +++I+R        EE L  + +  D+    +VLK+  +   +AL FFNW++ + G
Sbjct: 141 MVDEITKIVRADIGTGSMEEKLEKSGFVFDSEVVEKVLKRCFKVPHLALRFFNWVKFRNG 200

Query: 356 FKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEAL 415
             H   TY TM+ I G A++FG + KL+ +M   GC+ ++ T+  LI  YG+A  + +AL
Sbjct: 201 GCHTTRTYNTMLYIAGEAKEFGLVEKLIGEMEEKGCKRDIKTWTILISHYGKAKLIGKAL 260

Query: 416 DVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCL 475
            + ++M   GCEPD   Y  LI     A   D+A++ YK+M    +  D   Y +++ CL
Sbjct: 261 LILEKMWKSGCEPDVAAYMILIRSLCNAQKADIALEFYKEMVQKEMGLDMSLYELLLTCL 320

Query: 476 GKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDM--QNAGFEP 533
             +G +     +  +M+ +  IP    ++ M+     A   + AL+L RD+  +N   EP
Sbjct: 321 AGSGDIAGVQLVADDMIRRSQIPERDVFSCMLKSFCIAGRIREALELIRDLNDKNLTLEP 380

Query: 534 DKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWY 593
           +   +  +++ L     + +A A   ++ +K  V D  VYG+++  + +  ++ KA++  
Sbjct: 381 ND--FETLVKGLCRADRITDA-AEIVDIMKKRKVVDAKVYGIIISGYLRRNDIPKAFDVL 437

Query: 594 EAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKP 638
           + M ++G  P + T   L+    R+ +      L   ML  G++P
Sbjct: 438 QTMTESGYLPTISTYTELMQHLFRLNEYQKGCKLYDEMLERGVEP 482



 Score =  120 bits (302), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 101/375 (26%), Positives = 169/375 (45%), Gaps = 9/375 (2%)

Query: 298  VESVSRILRQWKWGPLAEEALGNTNYSMDAYQANQVLKQLQDHT-VALGFFNWLRRQAGF 356
            ++ + RIL       L EEAL        +    ++L+    H   AL FF+W+ ++ G+
Sbjct: 634  LQEICRILSTSMDWCLIEEALEKCTVQFTSQLVVEILRSCSLHGHAALLFFSWVGKRDGY 693

Query: 357  KHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALD 416
             H   TY   + I G ++ F ++  L  +M R G      T+  +I  YGRA     AL 
Sbjct: 694  SHTTETYNMGIKISGCSKNFRSMRNLFFEMRRKGHPVTPDTWTIMIMQYGRAGLTEIALR 753

Query: 417  VFKQMQVVGCEPDRVTYCTLIDIHA--KAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
             F +M+   C+P+  TY  LI      K   +D A+  + +M  AG  PD       + C
Sbjct: 754  NFAEMKANDCKPNGSTYKYLIICLCGRKGRKVDEAIKTFLEMIRAGYVPDKELVESYLKC 813

Query: 475  LGKAGHLQAAHQLFCEMVNQG-CIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEP 533
            L + G L  A +    +   G  IP  ++Y++ I    +A   + AL L  ++       
Sbjct: 814  LCEVGKLLDARRCTEALCKLGFTIP--LSYSLYIRALCRAGRLEEALALVDEVGPERVTL 871

Query: 534  DKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWY 593
            D+  Y  ++  L   G L EA      M++    P   VY  L+  + K   +RKA E +
Sbjct: 872  DQYIYGSLVHGLLRRGRLKEALEKVDSMKQIGIHPTVHVYTSLIVHFFKEKQMRKALETF 931

Query: 594  EAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNL-GLKPSLQTYTLLLSC-CT 651
            + M + G  P + T ++L+   + +G   DA ++  G+L L G  P  +TY++ +SC C 
Sbjct: 932  QKMKEEGCEPTIVTYSALIRGHMAMGNFVDARNVF-GLLQLKGPFPDFKTYSMFISCLCK 990

Query: 652  EARSPYDMGFCHELM 666
              +S   +    E++
Sbjct: 991  VGKSEEALQLLSEML 1005



 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 56/170 (32%), Positives = 92/170 (54%), Gaps = 3/170 (1%)

Query: 359  DEHTYTTMV-GILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDV 417
            D++ Y ++V G+L R R   A+ K+ D M + G  P V  Y  LI  + +   + +AL+ 
Sbjct: 872  DQYIYGSLVHGLLRRGRLKEALEKV-DSMKQIGIHPTVHVYTSLIVHFFKEKQMRKALET 930

Query: 418  FKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGK 477
            F++M+  GCEP  VTY  LI  H   G    A +++  +Q  G  PD  TYS+ I+CL K
Sbjct: 931  FQKMKEEGCEPTIVTYSALIRGHMAMGNFVDARNVFGLLQLKGPFPDFKTYSMFISCLCK 990

Query: 478  AGHLQAAHQLFCEMVNQGCIPNLVTY-NIMIALQAKARNYQSALKLYRDM 526
             G  + A QL  EM++ G IP+ + +  +M  L  + ++  + + L + +
Sbjct: 991  VGKSEEALQLLSEMLDSGIIPSTINFRTVMFGLNREGKHSLANIVLQKKL 1040



 Score = 73.2 bits (178), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 47/181 (25%), Positives = 83/181 (45%)

Query: 362  TYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQM 421
            +Y+  +  L RA +      L+D++  +    +   Y  L+H   R   L EAL+    M
Sbjct: 840  SYSLYIRALCRAGRLEEALALVDEVGPERVTLDQYIYGSLVHGLLRRGRLKEALEKVDSM 899

Query: 422  QVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHL 481
            + +G  P    Y +LI    K   +  A++ ++KM+  G  P   TYS +I      G+ 
Sbjct: 900  KQIGIHPTVHVYTSLIVHFFKEKQMRKALETFQKMKEEGCEPTIVTYSALIRGHMAMGNF 959

Query: 482  QAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIV 541
              A  +F  +  +G  P+  TY++ I+   K    + AL+L  +M ++G  P  + +  V
Sbjct: 960  VDARNVFGLLQLKGPFPDFKTYSMFISCLCKVGKSEEALQLLSEMLDSGIIPSTINFRTV 1019

Query: 542  M 542
            M
Sbjct: 1020 M 1020



 Score = 69.3 bits (168), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 51/178 (28%), Positives = 85/178 (47%), Gaps = 10/178 (5%)

Query: 396  VTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVT-----YCTLIDIHAKAGFLDVAM 450
            ++Y+  I +  RA  L EAL +  +   VG  P+RVT     Y +L+    + G L  A+
Sbjct: 839  LSYSLYIRALCRAGRLEEALALVDE---VG--PERVTLDQYIYGSLVHGLLRRGRLKEAL 893

Query: 451  DMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQ 510
            +    M+  G+ P    Y+ +I    K   ++ A + F +M  +GC P +VTY+ +I   
Sbjct: 894  EKVDSMKQIGIHPTVHVYTSLIVHFFKEKQMRKALETFQKMKEEGCEPTIVTYSALIRGH 953

Query: 511  AKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVP 568
                N+  A  ++  +Q  G  PD  TYS+ +  L   G  +EA  + +EM     +P
Sbjct: 954  MAMGNFVDARNVFGLLQLKGPFPDFKTYSMFISCLCKVGKSEEALQLLSEMLDSGIIP 1011



 Score = 67.0 bits (162), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 60/283 (21%), Positives = 113/283 (39%), Gaps = 37/283 (13%)

Query: 338 QDHTVALGFFN-WLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVV 396
           Q   +AL F+   ++++ G   D   Y  ++  L  +     +  + D M+R    P   
Sbjct: 289 QKADIALEFYKEMVQKEMGL--DMSLYELLLTCLAGSGDIAGVQLVADDMIRRSQIPERD 346

Query: 397 TYNRLIHSYGRANYLNEALDVFKQMQ--------------VVG-CEPDRVT-YCTLIDIH 440
            ++ ++ S+  A  + EAL++ + +               V G C  DR+T    ++DI 
Sbjct: 347 VFSCMLKSFCIAGRIREALELIRDLNDKNLTLEPNDFETLVKGLCRADRITDAAEIVDIM 406

Query: 441 AKAGFLDV------------------AMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQ 482
            K   +D                   A D+ + M  +G  P   TY+ ++  L +    Q
Sbjct: 407 KKRKVVDAKVYGIIISGYLRRNDIPKAFDVLQTMTESGYLPTISTYTELMQHLFRLNEYQ 466

Query: 483 AAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVM 542
              +L+ EM+ +G  P+ V    M+A   +  +   A K++  MQ  G      +YS+ +
Sbjct: 467 KGCKLYDEMLERGVEPDSVAITAMVAGHVRQNHIFEAWKVFNSMQERGIRATWKSYSVFI 526

Query: 543 EVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGN 585
           + L      DE   V  EM+    +  + V+  ++    K G 
Sbjct: 527 KELCKISRTDEVIKVLNEMQASKIIIGDEVFNWVISYLEKKGE 569



 Score = 63.5 bits (153), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 34/128 (26%), Positives = 61/128 (47%)

Query: 352  RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
            +Q G     H YT+++    + +Q     +   +M  +GC+P +VTY+ LI  +      
Sbjct: 900  KQIGIHPTVHVYTSLIVHFFKEKQMRKALETFQKMKEEGCEPTIVTYSALIRGHMAMGNF 959

Query: 412  NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
             +A +VF  +Q+ G  PD  TY   I    K G  + A+ +  +M  +G+ P T  +  +
Sbjct: 960  VDARNVFGLLQLKGPFPDFKTYSMFISCLCKVGKSEEALQLLSEMLDSGIIPSTINFRTV 1019

Query: 472  INCLGKAG 479
            +  L + G
Sbjct: 1020 MFGLNREG 1027



 Score = 52.8 bits (125), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 69/336 (20%), Positives = 127/336 (37%), Gaps = 40/336 (11%)

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
           ++G+     TYT ++  L R  ++    KL D+M+  G +P+ V    ++  + R N++ 
Sbjct: 442 ESGYLPTISTYTELMQHLFRLNEYQKGCKLYDEMLERGVEPDSVAITAMVAGHVRQNHIF 501

Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
           EA  VF  MQ  G      +Y   I    K    D  + +  +MQA+ +      ++ +I
Sbjct: 502 EAWKVFNSMQERGIRATWKSYSVFIKELCKISRTDEVIKVLNEMQASKIIIGDEVFNWVI 561

Query: 473 NCLGKAGHLQAAHQLF-----CEMVNQ------GCIPNLVTYNI---------------M 506
           + L K G  +   ++      C+   Q        +P    +N+               +
Sbjct: 562 SYLEKKGETEMVKKVMQMQRTCKFYPQEHEASGSIVPKRQLHNLDFNFNQLESGRMDLHL 621

Query: 507 IALQAKARNYQSALKLYRDMQNA--------GFEPDKVTYS--IVMEVLGHCGYLDEAEA 556
           +    K  N Q   ++ R +  +          E   V ++  +V+E+L  C     A  
Sbjct: 622 VEHLPKTYNEQDLQEICRILSTSMDWCLIEEALEKCTVQFTSQLVVEILRSCSLHGHAAL 681

Query: 557 VFAEM--RRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVP-TCNSLLS 613
           +F     +R  +      Y + + + G + N R     +  M + G  P  P T   ++ 
Sbjct: 682 LFFSWVGKRDGYSHTTETYNMGIKISGCSKNFRSMRNLFFEMRRKG-HPVTPDTWTIMIM 740

Query: 614 AFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSC 649
            + R G    A      M     KP+  TY  L+ C
Sbjct: 741 QYGRAGLTEIALRNFAEMKANDCKPNGSTYKYLIIC 776



 Score = 49.3 bits (116), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 44/208 (21%), Positives = 83/208 (39%), Gaps = 1/208 (0%)

Query: 363 YTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQ 422
           + T+V  L RA +     +++D M +     +   Y  +I  Y R N + +A DV + M 
Sbjct: 383 FETLVKGLCRADRITDAAEIVDIMKKRKV-VDAKVYGIIISGYLRRNDIPKAFDVLQTMT 441

Query: 423 VVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQ 482
             G  P   TY  L+    +         +Y +M   G+ PD+   + ++    +  H+ 
Sbjct: 442 ESGYLPTISTYTELMQHLFRLNEYQKGCKLYDEMLERGVEPDSVAITAMVAGHVRQNHIF 501

Query: 483 AAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVM 542
            A ++F  M  +G      +Y++ I    K       +K+  +MQ +        ++ V+
Sbjct: 502 EAWKVFNSMQERGIRATWKSYSVFIKELCKISRTDEVIKVLNEMQASKIIIGDEVFNWVI 561

Query: 543 EVLGHCGYLDEAEAVFAEMRRKNWVPDE 570
             L   G  +  + V    R   + P E
Sbjct: 562 SYLEKKGETEMVKKVMQMQRTCKFYPQE 589



 Score = 46.2 bits (108), Expect = 0.075,   Method: Compositional matrix adjust.
 Identities = 44/198 (22%), Positives = 77/198 (38%), Gaps = 36/198 (18%)

Query: 452 MYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQA 511
           M +K++ +G   D+     ++    K  HL      + +  N GC     TYN M+ +  
Sbjct: 158 MEEKLEKSGFVFDSEVVEKVLKRCFKVPHLALRFFNWVKFRNGGC-HTTRTYNTMLYIAG 216

Query: 512 KARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEP 571
           +A+ +    KL  +M+  G + D  T++I++   G    + +A  +  +M +    PD  
Sbjct: 217 EAKEFGLVEKLIGEMEEKGCKRDIKTWTILISHYGKAKLIGKALLILEKMWKSGCEPDVA 276

Query: 572 VYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGM 631
            Y +L+     A     A E+Y+ M+Q                                 
Sbjct: 277 AYMILIRSLCNAQKADIALEFYKEMVQK-------------------------------- 304

Query: 632 LNLGLKPSLQTYTLLLSC 649
             +GL  SL  Y LLL+C
Sbjct: 305 -EMGLDMSL--YELLLTC 319


>gi|297733858|emb|CBI15105.3| unnamed protein product [Vitis vinifera]
          Length = 627

 Score =  162 bits (409), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 126/525 (24%), Positives = 227/525 (43%), Gaps = 53/525 (10%)

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
           + G   D  TY+ +V   G+  +   +++LL +M   G  P++ +YN L+ ++ ++  + 
Sbjct: 38  EGGILPDITTYSYLVETFGKLNRLEKVSELLKEMESGGSFPDITSYNVLLEAHAQSGSIK 97

Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
           EA+ VF+QMQ  GC P+  TY  L++++ + G  D   D++ +M+ +   P+  TY+++I
Sbjct: 98  EAMGVFRQMQGAGCVPNAATYSILLNLYGRHGRYDDVRDLFLEMKVSNTEPNAATYNILI 157

Query: 473 NCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFE 532
           N  G+ G+ +    LF +MV +   PN+ TY  +I    K   ++ A K+   M   G  
Sbjct: 158 NVFGEGGYFKEVVTLFHDMVEENVEPNMETYEGLIFACGKGGLHEDAKKILLHMNEKGVV 217

Query: 533 PDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEW 592
           P    Y+ V+E  G     +EA   F  M      P    Y  L+ ++ K G  +++   
Sbjct: 218 PSSKAYTGVIEAYGQAALYEEALVAFNTMNEVGSKPTVETYNSLIQMFAKGGLYKESEAI 277

Query: 593 YEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAY---------------HLLQGMLN---- 633
              M Q+G+  N  T N ++ AF + GQ  +A                  L+ +L+    
Sbjct: 278 LLKMGQSGVARNRDTFNGVIEAFRQGGQFEEAIKAYVEMEKARCDPDEQTLEAVLSVYCF 337

Query: 634 ----------------LGLKPSLQTYTLLLSCCTEARSPYDM-GFCHELMAVSGHPAHMF 676
                           LG+ PS+  Y ++L+   +A    D      E+        H  
Sbjct: 338 AGLVEESEEQFGEIKALGILPSVMCYCMMLAVYAKADRWDDAHQLLDEMFTNRVSNIHQV 397

Query: 677 LLSMPSPGPDGQNVRDHVGSFLEMMHSEDRESKRGLVDAVVDFLHKSGLKEEAGSVWEVA 736
           +  M     D  +    V    E + SE         + +++ L   G KE A  V   A
Sbjct: 398 IGQMIRGDYDDDSNWQMVEYVFEKLKSEGCSLGVRFYNTLLEALWWLGQKERATRVLNEA 457

Query: 737 AQKNVYPDAVKEKGMSYWLINLHVMSDGTAVIALSRTLAWFRK--QMLISGVGPSRID-- 792
            ++ ++P+  ++  +  W +++H M +G A  A+S    W     +M ISG    ++   
Sbjct: 458 TKRGLFPELFRKNKL-VWSVDVHRMWEGAACTAIS---VWLNNMHEMFISGDDLPQLASA 513

Query: 793 -IVTGWGRRSRVTGTSLVRQAVQELLHMFSFPFFTENGNSGCFVG 836
            +V G   +S +T    V ++        ++ F  E  +S CF G
Sbjct: 514 VVVRGHMEKSSITRDFPVAKS--------AYAFLNEVSSSFCFPG 550



 Score =  150 bits (378), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 82/292 (28%), Positives = 144/292 (49%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           R  G + D  TY T++    R         +   M   G  P++ TY+ L+ ++G+ N L
Sbjct: 2   RHEGIQADIVTYNTLLSACARRGLGDEAEMVFRTMNEGGILPDITTYSYLVETFGKLNRL 61

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
            +  ++ K+M+  G  PD  +Y  L++ HA++G +  AM ++++MQ AG  P+  TYS++
Sbjct: 62  EKVSELLKEMESGGSFPDITSYNVLLEAHAQSGSIKEAMGVFRQMQGAGCVPNAATYSIL 121

Query: 472 INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF 531
           +N  G+ G       LF EM      PN  TYNI+I +  +   ++  + L+ DM     
Sbjct: 122 LNLYGRHGRYDDVRDLFLEMKVSNTEPNAATYNILINVFGEGGYFKEVVTLFHDMVEENV 181

Query: 532 EPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWE 591
           EP+  TY  ++   G  G  ++A+ +   M  K  VP    Y  +++ +G+A    +A  
Sbjct: 182 EPNMETYEGLIFACGKGGLHEDAKKILLHMNEKGVVPSSKAYTGVIEAYGQAALYEEALV 241

Query: 592 WYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTY 643
            +  M + G +P V T NSL+  F + G   ++  +L  M   G+  +  T+
Sbjct: 242 AFNTMNEVGSKPTVETYNSLIQMFAKGGLYKESEAILLKMGQSGVARNRDTF 293



 Score =  135 bits (341), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 76/262 (29%), Positives = 133/262 (50%)

Query: 386 MVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGF 445
           M  +G Q ++VTYN L+ +  R    +EA  VF+ M   G  PD  TY  L++   K   
Sbjct: 1   MRHEGIQADIVTYNTLLSACARRGLGDEAEMVFRTMNEGGILPDITTYSYLVETFGKLNR 60

Query: 446 LDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNI 505
           L+   ++ K+M++ G  PD  +Y+V++    ++G ++ A  +F +M   GC+PN  TY+I
Sbjct: 61  LEKVSELLKEMESGGSFPDITSYNVLLEAHAQSGSIKEAMGVFRQMQGAGCVPNAATYSI 120

Query: 506 MIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKN 565
           ++ L  +   Y     L+ +M+ +  EP+  TY+I++ V G  GY  E   +F +M  +N
Sbjct: 121 LLNLYGRHGRYDDVRDLFLEMKVSNTEPNAATYNILINVFGEGGYFKEVVTLFHDMVEEN 180

Query: 566 WVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAY 625
             P+   Y  L+   GK G    A +    M + G+ P+      ++ A+ +     +A 
Sbjct: 181 VEPNMETYEGLIFACGKGGLHEDAKKILLHMNEKGVVPSSKAYTGVIEAYGQAALYEEAL 240

Query: 626 HLLQGMLNLGLKPSLQTYTLLL 647
                M  +G KP+++TY  L+
Sbjct: 241 VAFNTMNEVGSKPTVETYNSLI 262



 Score =  133 bits (335), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 70/233 (30%), Positives = 125/233 (53%)

Query: 421 MQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGH 480
           M+  G + D VTY TL+   A+ G  D A  +++ M   G+ PD  TYS ++   GK   
Sbjct: 1   MRHEGIQADIVTYNTLLSACARRGLGDEAEMVFRTMNEGGILPDITTYSYLVETFGKLNR 60

Query: 481 LQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSI 540
           L+   +L  EM + G  P++ +YN+++   A++ + + A+ ++R MQ AG  P+  TYSI
Sbjct: 61  LEKVSELLKEMESGGSFPDITSYNVLLEAHAQSGSIKEAMGVFRQMQGAGCVPNAATYSI 120

Query: 541 VMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAG 600
           ++ + G  G  D+   +F EM+  N  P+   Y +L++++G+ G  ++    +  M++  
Sbjct: 121 LLNLYGRHGRYDDVRDLFLEMKVSNTEPNAATYNILINVFGEGGYFKEVVTLFHDMVEEN 180

Query: 601 LRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEA 653
           + PN+ T   L+ A  + G   DA  +L  M   G+ PS + YT ++    +A
Sbjct: 181 VEPNMETYEGLIFACGKGGLHEDAKKILLHMNEKGVVPSSKAYTGVIEAYGQA 233


>gi|242037347|ref|XP_002466068.1| hypothetical protein SORBIDRAFT_01g000640 [Sorghum bicolor]
 gi|241919922|gb|EER93066.1| hypothetical protein SORBIDRAFT_01g000640 [Sorghum bicolor]
          Length = 722

 Score =  162 bits (409), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 121/502 (24%), Positives = 221/502 (44%), Gaps = 16/502 (3%)

Query: 354 AGFKHDEHTYTTMVGILGRARQFGAINKLLDQM-VRDGCQPNVVTYNRLIHSYGRANYLN 412
           AG   D  TY+T++    R RQF    +  ++M   DG  P+ VTY+ ++  Y +     
Sbjct: 222 AGVPLDNITYSTLITAARRCRQFAKAVEWFERMYAADGVLPDEVTYSAVLDVYAQLGMKE 281

Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
           E L +F + +  G +PD V +  L  +  +AG  +    ++K+M   G+ P+ F Y+ ++
Sbjct: 282 EVLALFDRARGSGWKPDHVAFAVLAKMFGEAGDYEGIQFVFKEMTEVGIKPNIFVYNALL 341

Query: 473 NCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFE 532
             LGK G    A  LF EMV QG  PN  T   +  +  +AR  + AL+L+  M+     
Sbjct: 342 EALGKTGKPGLARNLFEEMVEQGVDPNARTLTALAKIYGRARWGRDALQLWDKMRELKLP 401

Query: 533 PDKVTYSIVMEVLGHCGYLDEAEAVFAEMR----RKNWVPDEPVYGLLVDLWGKAGNVRK 588
            D +  + ++ +    G ++EAE +F EM+    R    PD+  Y  +++++G  G+  +
Sbjct: 402 ADNILCNTLLSMCADVGLVNEAEQLFNEMKDPECRDVPKPDKWSYTAMINIYGSNGDTDR 461

Query: 589 AWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
           A + +  ML+ G+ PN+ +   ++    +  ++  A  +L+  L  GLKP  +    LLS
Sbjct: 462 ALQLFGEMLKGGIEPNIMSYTIVIQCLGKAQRIQQAVEVLEAGLEKGLKPDDRLCGCLLS 521

Query: 649 CCTEARSPYDMGFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLE-MMHSEDRE 707
                      G   E++  S    +  L+ +     D Q   D +   L+ ++++   E
Sbjct: 522 VIA-----LSSGEEMEIVLSSLQKFNQNLVKLIRVLSDAQVGADDITKELKSVLNAAAPE 576

Query: 708 SKRGLVDAVVDFLHKSGL-KEEAGSVWEVAAQKNVYPDAVKEKGMSYWLINLHVMSDGTA 766
            +R   + ++D     G   + A  V+ +A    +Y   ++ +    W ++L  +S G A
Sbjct: 577 VRRPYCNCLIDVCRNHGFPPQRAREVFHLAQTYGLY-TKLQSRKDEEWSLDLRSLSVGAA 635

Query: 767 VIALSRTLAWFRKQMLISGVGPSRIDIVTGWGRRSRVTGTSLVRQAVQELLHMFSFPFFT 826
             A    +    ++ +     P    + TG        G +    A    L   + PF  
Sbjct: 636 KTAFDDWMQTVSERWVQQKALPESFSVYTGSSTHKFAQGLA---SAFAAHLEQMAVPFHA 692

Query: 827 ENGNSGCFVGCGEPLNKWLLQS 848
               +G F+   + L  WL  S
Sbjct: 693 SESQAGSFISSRDDLVSWLQMS 714



 Score =  105 bits (263), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 65/251 (25%), Positives = 117/251 (46%), Gaps = 5/251 (1%)

Query: 333 VLKQLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQ 392
           V  QL      L  F+   R +G+K D   +  +  + G A  +  I  +  +M   G +
Sbjct: 273 VYAQLGMKEEVLALFD-RARGSGWKPDHVAFAVLAKMFGEAGDYEGIQFVFKEMTEVGIK 331

Query: 393 PNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDM 452
           PN+  YN L+ + G+      A ++F++M   G +P+  T   L  I+ +A +   A+ +
Sbjct: 332 PNIFVYNALLEALGKTGKPGLARNLFEEMVEQGVDPNARTLTALAKIYGRARWGRDALQL 391

Query: 453 YKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGC----IPNLVTYNIMIA 508
           + KM+   L  D    + +++     G +  A QLF EM +  C     P+  +Y  MI 
Sbjct: 392 WDKMRELKLPADNILCNTLLSMCADVGLVNEAEQLFNEMKDPECRDVPKPDKWSYTAMIN 451

Query: 509 LQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVP 568
           +     +   AL+L+ +M   G EP+ ++Y+IV++ LG    + +A  V      K   P
Sbjct: 452 IYGSNGDTDRALQLFGEMLKGGIEPNIMSYTIVIQCLGKAQRIQQAVEVLEAGLEKGLKP 511

Query: 569 DEPVYGLLVDL 579
           D+ + G L+ +
Sbjct: 512 DDRLCGCLLSV 522



 Score = 99.4 bits (246), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 57/202 (28%), Positives = 101/202 (50%), Gaps = 1/202 (0%)

Query: 454 KKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKA 513
           + + A     DT  ++V +  L  A     A +L  +M++ G   + +TY+ +I    + 
Sbjct: 182 RALPAGAFQLDTIFFNVALKSLRAARQWPHAERLALDMLDAGVPLDNITYSTLITAARRC 241

Query: 514 RNYQSALKLYRDMQNA-GFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPV 572
           R +  A++ +  M  A G  PD+VTYS V++V    G  +E  A+F   R   W PD   
Sbjct: 242 RQFAKAVEWFERMYAADGVLPDEVTYSAVLDVYAQLGMKEEVLALFDRARGSGWKPDHVA 301

Query: 573 YGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGML 632
           + +L  ++G+AG+       ++ M + G++PN+   N+LL A  + G+   A +L + M+
Sbjct: 302 FAVLAKMFGEAGDYEGIQFVFKEMTEVGIKPNIFVYNALLEALGKTGKPGLARNLFEEMV 361

Query: 633 NLGLKPSLQTYTLLLSCCTEAR 654
             G+ P+ +T T L      AR
Sbjct: 362 EQGVDPNARTLTALAKIYGRAR 383


>gi|222629097|gb|EEE61229.1| hypothetical protein OsJ_15269 [Oryza sativa Japonica Group]
          Length = 855

 Score =  162 bits (409), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 104/360 (28%), Positives = 168/360 (46%), Gaps = 42/360 (11%)

Query: 362 TYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQM 421
           TY  +V  L +A +    ++LLD M+  GC+PN + Y+ LI  + +A  ++ A +VF QM
Sbjct: 446 TYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQM 505

Query: 422 QVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHL 481
              G  P   TY +LID   K G LD+AM +  +M     +P+  TY+ +I+ L + G  
Sbjct: 506 TKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGES 565

Query: 482 QAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIV 541
           + A +L   M  +GC PN+VTY  +I    KA     +L L+  M   G  P+ VTY ++
Sbjct: 566 EKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYRVL 625

Query: 542 MEVLGHCGYLDEAEAVFAEMRRKNW---------------------------------VP 568
           +  L   G LD+A  +  EM++  W                                 VP
Sbjct: 626 INHLCAAGLLDKARLLLGEMKQTYWPKYLQGYRCAIQGFSKSFIASLGILEEMESYGTVP 685

Query: 569 DEPVYGLLVDLWGKAGNVRKAWEWYEAMLQ--AGLRPNVPTCNSLLSAFLRVGQLSDAYH 626
             PVYG+L+D + KAG +  A E ++ M++  + ++ +     SL+ A     Q+ +A+ 
Sbjct: 686 IAPVYGMLIDCFSKAGRLEIAMELHKEMMEVPSSVKTDNDMYASLIQALCLASQVEEAFR 745

Query: 627 LLQGMLNLGLKPSLQTYTLLLSCCTEARSPYD------MGFCHELMAVSGHPAHMFLLSM 680
           L   M   G  P L  +  L+    E +  +D       G CHE+  +  +   +FL + 
Sbjct: 746 LYSEMTRRGFVPELSVFVCLIKGLVEVKK-WDEALQLCYGICHEVGLLLSYTTQIFLFTF 804



 Score =  149 bits (377), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 91/313 (29%), Positives = 151/313 (48%), Gaps = 16/313 (5%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           +  G   D +TYT ++    +A        L ++M   GC P VVTY  LIH+Y +A  +
Sbjct: 315 KMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQV 374

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAG----------- 460
            +A D+F +M   GC P+ VTY  L+D   KAG +  A ++Y K+               
Sbjct: 375 PQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPC 434

Query: 461 -----LSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARN 515
                L+P+  TY  +++ L KA  +  AH+L   M++ GC PN + Y+ +I    KA  
Sbjct: 435 EDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGK 494

Query: 516 YQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGL 575
             SA +++  M   G+ P   TY+ +++ +   G LD A  V ++M + +  P+   Y  
Sbjct: 495 IDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTA 554

Query: 576 LVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLG 635
           ++D   + G   KA +    M + G  PNV T  +L+    + G++  +  L   M   G
Sbjct: 555 MIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKG 614

Query: 636 LKPSLQTYTLLLS 648
             P+  TY +L++
Sbjct: 615 CSPNYVTYRVLIN 627



 Score =  146 bits (369), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 90/311 (28%), Positives = 151/311 (48%), Gaps = 16/311 (5%)

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
           + GF  D  TY+ ++  L  A +      L  +M   G  P+V TY  LI S+ +A  + 
Sbjct: 281 RKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIE 340

Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
           +A  +F++M+ VGC P  VTY  LI  + KA  +  A D++ +M  AG  P+  TY  ++
Sbjct: 341 QAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALV 400

Query: 473 NCLGKAGHLQAAHQLFCEMVNQG----------------CIPNLVTYNIMIALQAKARNY 516
           + L KAG++  A +++ +++                     PN+VTY  ++    KA   
Sbjct: 401 DGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKV 460

Query: 517 QSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLL 576
             A +L   M ++G EP+ + Y  +++     G +D A+ VF +M +  ++P    Y  L
Sbjct: 461 DHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSL 520

Query: 577 VDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGL 636
           +D   K G +  A +    ML+    PNV T  +++    R+G+   A  LL  M   G 
Sbjct: 521 IDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGC 580

Query: 637 KPSLQTYTLLL 647
            P++ TYT L+
Sbjct: 581 SPNVVTYTALI 591



 Score =  140 bits (353), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 88/289 (30%), Positives = 146/289 (50%), Gaps = 16/289 (5%)

Query: 375 QFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYC 434
           +F    +L+ +M+R G  P+  TY+++I     A  + +A  +F++M++VG  PD  TY 
Sbjct: 268 KFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYT 327

Query: 435 TLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQ 494
            LID   KAG ++ A  ++++M++ G SP   TY+ +I+   KA  +  A+ +F  MV+ 
Sbjct: 328 ILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDA 387

Query: 495 GCIPNLVTYNIMIALQAKARNYQSALKLY------RDMQNAGF----------EPDKVTY 538
           GC PN VTY  ++    KA N   A ++Y       D  ++ F           P+ VTY
Sbjct: 388 GCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTY 447

Query: 539 SIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQ 598
             +++ L     +D A  +   M      P+  VY  L+D + KAG +  A E +  M +
Sbjct: 448 GALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTK 507

Query: 599 AGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
            G  P+V T  SL+    + G+L  A  +L  ML     P++ TYT ++
Sbjct: 508 CGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMI 556



 Score =  135 bits (341), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 84/338 (24%), Positives = 156/338 (46%), Gaps = 11/338 (3%)

Query: 304 ILRQWKWGPLAEEALGNTNYSMDAYQANQVLKQLQDHTV---ALGFFNWLRRQAGFKHDE 360
           + ++ +W   A + +   ++ +D      ++  L + +    A+ F + +R  +    + 
Sbjct: 85  LCKEGRWAD-ALDMIEREDFKLDTVLCTHMISGLMEASYFDEAMSFLHRMRCNSCIP-NV 142

Query: 361 HTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQ 420
            TY T++    + +Q G   ++++ M+ +GC PN   +N L+HSY        A  +  +
Sbjct: 143 VTYRTLLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNR 202

Query: 421 MQVVGCEPDRVTYCTLI------DIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
           M   GC P  V Y   I      +       LD+A  +Y +M AA    +    +    C
Sbjct: 203 MTTCGCPPGYVVYNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARC 262

Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPD 534
           L   G    A QL  EM+ +G +P+  TY+ +I     A   + A  L+++M+  G  PD
Sbjct: 263 LCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPD 322

Query: 535 KVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYE 594
             TY+I+++     G +++A+ +F EMR     P    Y  L+  + KA  V +A + + 
Sbjct: 323 VYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFH 382

Query: 595 AMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGML 632
            M+ AG RPN  T  +L+    + G +S A+ +   ++
Sbjct: 383 RMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLI 420



 Score =  135 bits (339), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 94/331 (28%), Positives = 148/331 (44%), Gaps = 57/331 (17%)

Query: 374 RQFGAINKLLDQMVRDGCQPNVVTYNRLIHS-------------------YGR------- 407
           + +    KLL++M   GC P  V YN  I S                   YG        
Sbjct: 191 KDYAYAYKLLNRMTTCGCPPGYVVYNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCV 250

Query: 408 ------ANY---------LNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDM 452
                 AN+          ++A  + K+M   G  PD  TY  +I     A  ++ A  +
Sbjct: 251 LNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLL 310

Query: 453 YKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAK 512
           +++M+  G++PD +TY+++I+   KAG ++ A  LF EM + GC P +VTY  +I    K
Sbjct: 311 FQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLK 370

Query: 513 ARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEM----------- 561
           A+    A  ++  M +AG  P+ VTY  +++ L   G + +A  V+A++           
Sbjct: 371 AKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDF 430

Query: 562 -----RRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFL 616
                 R    P+   YG LVD   KA  V  A E  +AML +G  PN    ++L+  F 
Sbjct: 431 YFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFC 490

Query: 617 RVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
           + G++  A  +   M   G  PS+ TYT L+
Sbjct: 491 KAGKIDSAQEVFLQMTKCGYLPSVHTYTSLI 521



 Score =  132 bits (331), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 89/302 (29%), Positives = 145/302 (48%), Gaps = 11/302 (3%)

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
           + G+    HTYT+++  + +  +     K+L QM++D C PNVVTY  +I    R     
Sbjct: 507 KCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESE 566

Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
           +AL +   M+  GC P+ VTY  LID   KAG +D+++D++ +M   G SP+  TY V+I
Sbjct: 567 KALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYRVLI 626

Query: 473 NCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFE 532
           N L  AG L  A  L  EM        L  Y    A+Q  ++++ ++L +  +M++ G  
Sbjct: 627 NHLCAAGLLDKARLLLGEMKQTYWPKYLQGYR--CAIQGFSKSFIASLGILEEMESYGTV 684

Query: 533 PDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVP-----DEPVYGLLVDLWGKAGNVR 587
           P    Y ++++     G L+ A  +  EM     VP     D  +Y  L+     A  V 
Sbjct: 685 PIAPVYGMLIDCFSKAGRLEIAMELHKEMME---VPSSVKTDNDMYASLIQALCLASQVE 741

Query: 588 KAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLN-LGLKPSLQTYTLL 646
           +A+  Y  M + G  P +     L+   + V +  +A  L  G+ + +GL  S  T   L
Sbjct: 742 EAFRLYSEMTRRGFVPELSVFVCLIKGLVEVKKWDEALQLCYGICHEVGLLLSYTTQIFL 801

Query: 647 LS 648
            +
Sbjct: 802 FT 803



 Score =  124 bits (312), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 83/277 (29%), Positives = 135/277 (48%), Gaps = 3/277 (1%)

Query: 393 PNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDM 452
           PNVVTY  L+    +A+ ++ A ++   M   GCEP+ + Y  LID   KAG +D A ++
Sbjct: 442 PNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEV 501

Query: 453 YKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAK 512
           + +M   G  P   TY+ +I+ + K G L  A ++  +M+   C PN+VTY  MI    +
Sbjct: 502 FLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCR 561

Query: 513 ARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPV 572
               + ALKL   M+  G  P+ VTY+ +++ LG  G +D +  +F +M RK   P+   
Sbjct: 562 IGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVT 621

Query: 573 YGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGML 632
           Y +L++    AG + KA      M Q      +      +  F +      +  +L+ M 
Sbjct: 622 YRVLINHLCAAGLLDKARLLLGEMKQTYWPKYLQGYRCAIQGFSK--SFIASLGILEEME 679

Query: 633 NLGLKPSLQTYTLLLSCCTEA-RSPYDMGFCHELMAV 668
           + G  P    Y +L+ C ++A R    M    E+M V
Sbjct: 680 SYGTVPIAPVYGMLIDCFSKAGRLEIAMELHKEMMEV 716



 Score =  123 bits (308), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 107/449 (23%), Positives = 173/449 (38%), Gaps = 23/449 (5%)

Query: 307 QWKWGPLAEEALGNTNYSMDAYQANQVLKQLQDHTVALGFFNWLRRQAGFKHDEHTYTTM 366
           Q   G   ++ +  + + MD +        L          + + R+  FK D    T M
Sbjct: 55  QVDLGFRVQKEMSESGFCMDRFTVGCFAHALCKEGRWADALDMIERE-DFKLDTVLCTHM 113

Query: 367 VGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGC 426
           +  L  A  F      L +M  + C PNVVTY  L+  + +   L     +   M   GC
Sbjct: 114 ISGLMEASYFDEAMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQLGWCKRIINMMMTEGC 173

Query: 427 EPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIIN--C----LGKAGH 480
            P+   + +L+  +        A  +  +M   G  P    Y++ I   C    L     
Sbjct: 174 NPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYNIFIGSICGQEKLPSPDL 233

Query: 481 LQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSI 540
           L  A +++ EM+   C+ N V              +  A +L ++M   GF PD  TYS 
Sbjct: 234 LDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSK 293

Query: 541 VMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAG 600
           V+  L H   +++A  +F EM+     PD   Y +L+D + KAG + +A   +E M   G
Sbjct: 294 VITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVG 353

Query: 601 LRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS-CCTEARSPYDM 659
             P V T  +L+ A+L+  Q+  A  +   M++ G +P+  TY  L+   C         
Sbjct: 354 CSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAF 413

Query: 660 GFCHELMAVSGHPAHMFLLSMPSPGPDGQNV---------------RDHVGSFLEMMHSE 704
               +L+  S      F            NV                DH    L+ M S 
Sbjct: 414 EVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSS 473

Query: 705 DRESKRGLVDAVVDFLHKSGLKEEAGSVW 733
             E    + DA++D   K+G  + A  V+
Sbjct: 474 GCEPNHIVYDALIDGFCKAGKIDSAQEVF 502



 Score = 90.5 bits (223), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 77/331 (23%), Positives = 123/331 (37%), Gaps = 73/331 (22%)

Query: 390 GCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVT----------------- 432
           G +P+ VTYN L+     A  ++    V K+M   G   DR T                 
Sbjct: 35  GYRPSKVTYNALVQVLSSAGQVDLGFRVQKEMSESGFCMDRFTVGCFAHALCKEGRWADA 94

Query: 433 --------------YCT-LIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGK 477
                          CT +I    +A + D AM    +M+     P+  TY  +++   K
Sbjct: 95  LDMIEREDFKLDTVLCTHMISGLMEASYFDEAMSFLHRMRCNSCIPNVVTYRTLLSGFLK 154

Query: 478 AGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVT 537
              L    ++   M+ +GC PN   +N ++      ++Y  A KL   M   G  P  V 
Sbjct: 155 KKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVV 214

Query: 538 YSIVM-----------------------------------------EVLGHCGYLDEAEA 556
           Y+I +                                           L   G  D+A  
Sbjct: 215 YNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQ 274

Query: 557 VFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFL 616
           +  EM RK +VPD   Y  ++     A  V KA+  ++ M   G+ P+V T   L+ +F 
Sbjct: 275 LIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFC 334

Query: 617 RVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
           + G +  A  L + M ++G  P++ TYT L+
Sbjct: 335 KAGLIEQAQWLFEEMRSVGCSPTVVTYTALI 365



 Score = 79.0 bits (193), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 56/208 (26%), Positives = 92/208 (44%), Gaps = 35/208 (16%)

Query: 350 LRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRAN 409
           L  + G   +  TYT ++  LG+A +      L  QM R GC PN VTY  LI+    A 
Sbjct: 574 LMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYRVLINHLCAAG 633

Query: 410 YLNEA---------------------------------LDVFKQMQVVGCEPDRVTYCTL 436
            L++A                                 L + ++M+  G  P    Y  L
Sbjct: 634 LLDKARLLLGEMKQTYWPKYLQGYRCAIQGFSKSFIASLGILEEMESYGTVPIAPVYGML 693

Query: 437 IDIHAKAGFLDVAMDMYKKMQA--AGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQ 494
           ID  +KAG L++AM+++K+M    + +  D   Y+ +I  L  A  ++ A +L+ EM  +
Sbjct: 694 IDCFSKAGRLEIAMELHKEMMEVPSSVKTDNDMYASLIQALCLASQVEEAFRLYSEMTRR 753

Query: 495 GCIPNLVTYNIMIALQAKARNYQSALKL 522
           G +P L  +  +I    + + +  AL+L
Sbjct: 754 GFVPELSVFVCLIKGLVEVKKWDEALQL 781



 Score = 43.1 bits (100), Expect = 0.68,   Method: Compositional matrix adjust.
 Identities = 30/123 (24%), Positives = 50/123 (40%), Gaps = 3/123 (2%)

Query: 526 MQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGN 585
           +++ G+ P KVTY+ +++VL   G +D    V  EM    +  D    G       K G 
Sbjct: 31  LKDFGYRPSKVTYNALVQVLSSAGQVDLGFRVQKEMSESGFCMDRFTVGCFAHALCKEGR 90

Query: 586 VRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTL 645
              A +  E   +   + +   C  ++S  +      +A   L  M      P++ TY  
Sbjct: 91  WADALDMIE---REDFKLDTVLCTHMISGLMEASYFDEAMSFLHRMRCNSCIPNVVTYRT 147

Query: 646 LLS 648
           LLS
Sbjct: 148 LLS 150


>gi|222622462|gb|EEE56594.1| hypothetical protein OsJ_05954 [Oryza sativa Japonica Group]
          Length = 579

 Score =  162 bits (409), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 77/189 (40%), Positives = 115/189 (60%)

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
           + G   D   Y  +   LG+ +Q   I+ L D+M  +G  P+V TYN +I SYGR   ++
Sbjct: 363 EKGIVTDVGMYNMVFSALGKLKQVSFISNLFDKMKTNGIIPDVFTYNIMISSYGRVGLVD 422

Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
           +A ++F+ M+   C+PD VTY +LI+   K G LD A  ++K+MQ  G  PD FTYS++I
Sbjct: 423 KASELFEVMEASSCKPDVVTYNSLINCLGKHGDLDEAHMLFKEMQEKGYDPDVFTYSILI 482

Query: 473 NCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFE 532
            C GK+  ++ A  LF EM+++GC PN+VTYNI++    +    + A KLY  M+  G  
Sbjct: 483 ECFGKSNKVEMACSLFDEMISEGCTPNIVTYNILLDCLERRGKTEEAHKLYETMKQQGLI 542

Query: 533 PDKVTYSIV 541
           PD +TYSI+
Sbjct: 543 PDSITYSIL 551



 Score =  146 bits (368), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 92/316 (29%), Positives = 154/316 (48%), Gaps = 32/316 (10%)

Query: 363 YTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTY------------------------ 398
           + T++  LG+ +    +  +L +MV + CQPN  TY                        
Sbjct: 236 FNTIIEALGKNKMVDKVIFVLSKMVENDCQPNQFTYSITLDILATEGQLHRLNEVLDICS 295

Query: 399 ---NRLIHSY-----GRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAM 450
              NR I+SY      ++ + +EA +VF +M     + DR  + +++++   A     A+
Sbjct: 296 RFMNRSIYSYLVKSLCKSGHASEAHNVFCRMWNSHEKGDRDAFVSMLEVLCNAEKTLEAI 355

Query: 451 DMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQ 510
           D+   M   G+  D   Y+++ + LGK   +     LF +M   G IP++ TYNIMI+  
Sbjct: 356 DLLHMMPEKGIVTDVGMYNMVFSALGKLKQVSFISNLFDKMKTNGIIPDVFTYNIMISSY 415

Query: 511 AKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDE 570
            +      A +L+  M+ +  +PD VTY+ ++  LG  G LDEA  +F EM+ K + PD 
Sbjct: 416 GRVGLVDKASELFEVMEASSCKPDVVTYNSLINCLGKHGDLDEAHMLFKEMQEKGYDPDV 475

Query: 571 PVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQG 630
             Y +L++ +GK+  V  A   ++ M+  G  PN+ T N LL    R G+  +A+ L + 
Sbjct: 476 FTYSILIECFGKSNKVEMACSLFDEMISEGCTPNIVTYNILLDCLERRGKTEEAHKLYET 535

Query: 631 MLNLGLKPSLQTYTLL 646
           M   GL P   TY++L
Sbjct: 536 MKQQGLIPDSITYSIL 551



 Score =  144 bits (362), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 105/446 (23%), Positives = 188/446 (42%), Gaps = 46/446 (10%)

Query: 306 RQWKWGPLAEEALGNTNYSMDAYQANQVLKQLQDHTVALGFFNWLR--RQAGFKHDEHTY 363
           R+   G    E +    Y +D +  N +L  L    +    F      +Q     D +TY
Sbjct: 142 REVSKGFQVYEEMRRKGYKLDIFAYNMLLDALAKAGMVDQAFQVFEDMKQKHCVPDAYTY 201

Query: 364 TTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQV 423
           T ++ + G+A +        D+MV  GC  N++ +N +I + G+   +++ + V  +M  
Sbjct: 202 TILIRMSGKAGRTSKFLSFFDEMVSKGCVLNLIAFNTIIEALGKNKMVDKVIFVLSKMVE 261

Query: 424 VGCEPDRVTYCTLIDIHAKAG---FLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGH 480
             C+P++ TY   +DI A  G    L+  +D+  +     +      YS ++  L K+GH
Sbjct: 262 NDCQPNQFTYSITLDILATEGQLHRLNEVLDICSRFMNRSI------YSYLVKSLCKSGH 315

Query: 481 LQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSI 540
              AH +FC M N     +   +  M+ +   A     A+ L   M   G   D   Y++
Sbjct: 316 ASEAHNVFCRMWNSHEKGDRDAFVSMLEVLCNAEKTLEAIDLLHMMPEKGIVTDVGMYNM 375

Query: 541 VMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAG 600
           V   LG    +     +F +M+    +PD   Y +++  +G+ G V KA E +E M  + 
Sbjct: 376 VFSALGKLKQVSFISNLFDKMKTNGIIPDVFTYNIMISSYGRVGLVDKASELFEVMEASS 435

Query: 601 LRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMG 660
            +P+V T NSL++   + G L +A+ L + M   G  P + TY++L+ C  ++       
Sbjct: 436 CKPDVVTYNSLINCLGKHGDLDEAHMLFKEMQEKGYDPDVFTYSILIECFGKS------- 488

Query: 661 FCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRESKRGLVDAVVDFL 720
                                       N  +   S  + M SE         + ++D L
Sbjct: 489 ----------------------------NKVEMACSLFDEMISEGCTPNIVTYNILLDCL 520

Query: 721 HKSGLKEEAGSVWEVAAQKNVYPDAV 746
            + G  EEA  ++E   Q+ + PD++
Sbjct: 521 ERRGKTEEAHKLYETMKQQGLIPDSI 546



 Score =  132 bits (332), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 70/227 (30%), Positives = 122/227 (53%)

Query: 357 KHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALD 416
           K D   + +M+ +L  A +      LL  M   G   +V  YN +  + G+   ++   +
Sbjct: 332 KGDRDAFVSMLEVLCNAEKTLEAIDLLHMMPEKGIVTDVGMYNMVFSALGKLKQVSFISN 391

Query: 417 VFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLG 476
           +F +M+  G  PD  TY  +I  + + G +D A ++++ M+A+   PD  TY+ +INCLG
Sbjct: 392 LFDKMKTNGIIPDVFTYNIMISSYGRVGLVDKASELFEVMEASSCKPDVVTYNSLINCLG 451

Query: 477 KAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKV 536
           K G L  AH LF EM  +G  P++ TY+I+I    K+   + A  L+ +M + G  P+ V
Sbjct: 452 KHGDLDEAHMLFKEMQEKGYDPDVFTYSILIECFGKSNKVEMACSLFDEMISEGCTPNIV 511

Query: 537 TYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKA 583
           TY+I+++ L   G  +EA  ++  M+++  +PD   Y +L  L  ++
Sbjct: 512 TYNILLDCLERRGKTEEAHKLYETMKQQGLIPDSITYSILERLESRS 558



 Score =  114 bits (284), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 55/160 (34%), Positives = 96/160 (60%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           G   D  TY  M+   GR       ++L + M    C+P+VVTYN LI+  G+   L+EA
Sbjct: 400 GIIPDVFTYNIMISSYGRVGLVDKASELFEVMEASSCKPDVVTYNSLINCLGKHGDLDEA 459

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
             +FK+MQ  G +PD  TY  LI+   K+  +++A  ++ +M + G +P+  TY+++++C
Sbjct: 460 HMLFKEMQEKGYDPDVFTYSILIECFGKSNKVEMACSLFDEMISEGCTPNIVTYNILLDC 519

Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKAR 514
           L + G  + AH+L+  M  QG IP+ +TY+I+  L+++++
Sbjct: 520 LERRGKTEEAHKLYETMKQQGLIPDSITYSILERLESRSQ 559



 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 27/92 (29%), Positives = 50/92 (54%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           ++ G+  D  TY+ ++   G++ +      L D+M+ +GC PN+VTYN L+    R    
Sbjct: 467 QEKGYDPDVFTYSILIECFGKSNKVEMACSLFDEMISEGCTPNIVTYNILLDCLERRGKT 526

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKA 443
            EA  +++ M+  G  PD +TY  L  + +++
Sbjct: 527 EEAHKLYETMKQQGLIPDSITYSILERLESRS 558


>gi|413953163|gb|AFW85812.1| hypothetical protein ZEAMMB73_202457 [Zea mays]
          Length = 731

 Score =  161 bits (408), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 87/268 (32%), Positives = 147/268 (54%)

Query: 381 KLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIH 440
           +  D M+ DG  PNV TYN L+ +     +  EAL + + M+  GC P+ VTY TL+   
Sbjct: 176 RFFDSMLSDGVAPNVYTYNILVRALCGRGHRKEALSILRDMRGAGCGPNVVTYNTLVAAF 235

Query: 441 AKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNL 500
            +AG +D A  +   M+  GL P+  T++ ++N + KAG ++ A ++F EMV +G  P+ 
Sbjct: 236 FRAGEVDGAERLVGMMREGGLKPNLVTFNSMVNGMCKAGKMEDARKVFDEMVREGLAPDG 295

Query: 501 VTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAE 560
           V+YN ++    KA     AL ++ +M   G  PD VT++ ++ V+   G L+ A  +  +
Sbjct: 296 VSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPDVVTFTSLIHVMCKAGNLERAVTLVRQ 355

Query: 561 MRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQ 620
           MR +    +E  +  L+D + K G +  A      M Q  ++P+V   N+L++ +  VG+
Sbjct: 356 MRERGLQMNEVTFTALIDGFCKKGFLDDALLAVRGMKQCRIKPSVVCYNALINGYCMVGR 415

Query: 621 LSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
           + +A  LL  M   GLKP + TY+ ++S
Sbjct: 416 MDEARELLHEMEAKGLKPDVVTYSTIIS 443



 Score =  159 bits (403), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 140/499 (28%), Positives = 222/499 (44%), Gaps = 51/499 (10%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           R AG   +  TY T+V    RA +     +L+  M   G +PN+VT+N +++   +A  +
Sbjct: 217 RGAGCGPNVVTYNTLVAAFFRAGEVDGAERLVGMMREGGLKPNLVTFNSMVNGMCKAGKM 276

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
            +A  VF +M   G  PD V+Y TL+  + KAG    A+ ++ +M   G+ PD  T++ +
Sbjct: 277 EDARKVFDEMVREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPDVVTFTSL 336

Query: 472 INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF 531
           I+ + KAG+L+ A  L  +M  +G   N VT+  +I    K      AL   R M+    
Sbjct: 337 IHVMCKAGNLERAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDALLAVRGMKQCRI 396

Query: 532 EPDKVTYSIVMEVLGHC--GYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKA 589
           +P  V Y+ ++   G+C  G +DEA  +  EM  K   PD   Y  ++  + K  +   A
Sbjct: 397 KPSVVCYNALIN--GYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAYCKNCDTHSA 454

Query: 590 WEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSC 649
           +E  + ML+ G+ P+  T +SL+       +LSDA+ L + M+ LGL+P   TYT L+  
Sbjct: 455 FELNQQMLEKGVLPDAITYSSLIRVLCGEKRLSDAHVLFKNMIKLGLQPDEFTYTSLIDG 514

Query: 650 -CTEARSPYDMGFCHELMAVSG---------------------HPAHMFLLSMPSPGPDG 687
            C E      +   H+ M  +G                       A   L  +    P  
Sbjct: 515 HCKEGNVESALSL-HDKMVKAGVLPDVVTYSVLINGLSKSARAMEAQQLLFKLYHEDPIP 573

Query: 688 QNVRDHVGSFLEMMHSEDRESKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAVK 747
            N +     +  +MH   +   + ++  +  F  K GL  EA  V++    +N   D   
Sbjct: 574 ANTK-----YDALMHCCRKAELKSVLALLKGFCMK-GLMNEADKVYQSMLDRNWNLD--- 624

Query: 748 EKGMSY-WLINLHVMSDGTAVIALSRTLAWFRKQMLISGVGP---SRIDIVTGWGRRSRV 803
             G  Y  LI+ H  + G  + ALS     F KQML  G  P   S I ++ G      V
Sbjct: 625 --GSVYSVLIHGHCRA-GNVMKALS-----FHKQMLQGGFAPNSTSTISLIRGLFENGMV 676

Query: 804 TGTSLVRQAVQELLHMFSF 822
                  Q +Q+LL+  S 
Sbjct: 677 VEAD---QVIQQLLNYCSL 692



 Score =  105 bits (263), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 79/300 (26%), Positives = 126/300 (42%), Gaps = 50/300 (16%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           G K D  TY+T++    +     +  +L  QM+  G  P+ +TY+ LI        L++A
Sbjct: 430 GLKPDVVTYSTIISAYCKNCDTHSAFELNQQMLEKGVLPDAITYSSLIRVLCGEKRLSDA 489

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
             +FK M  +G +PD  TY +LID H K G ++ A+ ++ KM  AG+ PD  TYSV+IN 
Sbjct: 490 HVLFKNMIKLGLQPDEFTYTSLIDGHCKEGNVESALSLHDKMVKAGVLPDVVTYSVLING 549

Query: 475 LGKAGHLQAAHQLFCEMVNQGCIP------------------------------------ 498
           L K+     A QL  ++ ++  IP                                    
Sbjct: 550 LSKSARAMEAQQLLFKLYHEDPIPANTKYDALMHCCRKAELKSVLALLKGFCMKGLMNEA 609

Query: 499 ------------NL--VTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEV 544
                       NL    Y+++I    +A N   AL  ++ M   GF P+  +   ++  
Sbjct: 610 DKVYQSMLDRNWNLDGSVYSVLIHGHCRAGNVMKALSFHKQMLQGGFAPNSTSTISLIRG 669

Query: 545 LGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPN 604
           L   G + EA+ V  ++     + D      L+DL    GNV    +    M + GL P+
Sbjct: 670 LFENGMVVEADQVIQQLLNYCSLADAEASKALIDLNLNEGNVDAVLDVLHGMAKDGLLPS 729



 Score = 49.7 bits (117), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 54/249 (21%), Positives = 94/249 (37%), Gaps = 54/249 (21%)

Query: 335 KQLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPN 394
           K+L D  V   F N ++   G + DE TYT+++    +     +   L D+MV+ G  P+
Sbjct: 484 KRLSDAHVL--FKNMIK--LGLQPDEFTYTSLIDGHCKEGNVESALSLHDKMVKAGVLPD 539

Query: 395 VVTYNRLIHSYGRA---------------------------------------------- 408
           VVTY+ LI+   ++                                              
Sbjct: 540 VVTYSVLINGLSKSARAMEAQQLLFKLYHEDPIPANTKYDALMHCCRKAELKSVLALLKG 599

Query: 409 ----NYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPD 464
                 +NEA  V++ M       D   Y  LI  H +AG +  A+  +K+M   G +P+
Sbjct: 600 FCMKGLMNEADKVYQSMLDRNWNLDGSVYSVLIHGHCRAGNVMKALSFHKQMLQGGFAPN 659

Query: 465 TFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYR 524
           + +   +I  L + G +  A Q+  +++N   + +      +I L     N  + L +  
Sbjct: 660 STSTISLIRGLFENGMVVEADQVIQQLLNYCSLADAEASKALIDLNLNEGNVDAVLDVLH 719

Query: 525 DMQNAGFEP 533
            M   G  P
Sbjct: 720 GMAKDGLLP 728


>gi|218190347|gb|EEC72774.1| hypothetical protein OsI_06434 [Oryza sativa Indica Group]
          Length = 579

 Score =  161 bits (408), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 77/189 (40%), Positives = 115/189 (60%)

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
           + G   D   Y  +   LG+ +Q   I+ L D+M  +G  P+V TYN +I SYGR   ++
Sbjct: 363 EKGIVTDVGMYNMVFSALGKLKQVSFISNLFDKMKTNGIIPDVFTYNIMISSYGRVGLVD 422

Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
           +A ++F+ M+   C+PD VTY +LI+   K G LD A  ++K+MQ  G  PD FTYS++I
Sbjct: 423 KASELFEVMEASSCKPDVVTYNSLINCLGKHGDLDEAHMLFKEMQEKGYDPDVFTYSILI 482

Query: 473 NCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFE 532
            C GK+  ++ A  LF EM+++GC PN+VTYNI++    +    + A KLY  M+  G  
Sbjct: 483 ECFGKSNKVEMACSLFDEMISEGCTPNIVTYNILLDCLERRGKTEEAHKLYETMKQQGLI 542

Query: 533 PDKVTYSIV 541
           PD +TYSI+
Sbjct: 543 PDSITYSIL 551



 Score =  145 bits (367), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 92/316 (29%), Positives = 154/316 (48%), Gaps = 32/316 (10%)

Query: 363 YTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTY------------------------ 398
           + T++  LG+ +    +  +L +MV + CQPN  TY                        
Sbjct: 236 FNTIIEALGKNKMVDKVIFVLSKMVENDCQPNQFTYSITLDILATEGQLHRLNEVLDICS 295

Query: 399 ---NRLIHSY-----GRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAM 450
              NR I+SY      ++ + +EA +VF +M     + DR  + +++++   A     A+
Sbjct: 296 RFMNRSIYSYLVKSLCKSGHASEAHNVFCRMWNSHEKGDRDAFVSMLEVLCNAEKTLEAI 355

Query: 451 DMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQ 510
           D+   M   G+  D   Y+++ + LGK   +     LF +M   G IP++ TYNIMI+  
Sbjct: 356 DLLHMMPEKGIVTDVGMYNMVFSALGKLKQVSFISNLFDKMKTNGIIPDVFTYNIMISSY 415

Query: 511 AKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDE 570
            +      A +L+  M+ +  +PD VTY+ ++  LG  G LDEA  +F EM+ K + PD 
Sbjct: 416 GRVGLVDKASELFEVMEASSCKPDVVTYNSLINCLGKHGDLDEAHMLFKEMQEKGYDPDV 475

Query: 571 PVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQG 630
             Y +L++ +GK+  V  A   ++ M+  G  PN+ T N LL    R G+  +A+ L + 
Sbjct: 476 FTYSILIECFGKSNKVEMACSLFDEMISEGCTPNIVTYNILLDCLERRGKTEEAHKLYET 535

Query: 631 MLNLGLKPSLQTYTLL 646
           M   GL P   TY++L
Sbjct: 536 MKQQGLIPDSITYSIL 551



 Score =  143 bits (361), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 105/446 (23%), Positives = 188/446 (42%), Gaps = 46/446 (10%)

Query: 306 RQWKWGPLAEEALGNTNYSMDAYQANQVLKQLQDHTVALGFFNWLR--RQAGFKHDEHTY 363
           R+   G    E +    Y +D +  N +L  L    +    F      +Q     D +TY
Sbjct: 142 REVSKGFQVYEEMRRKGYKLDIFAYNMLLDALAKAGMVDQAFQVFEDMKQKHCVPDAYTY 201

Query: 364 TTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQV 423
           T ++ + G+A +        D+MV  GC  N++ +N +I + G+   +++ + V  +M  
Sbjct: 202 TILIRMSGKAGRTSKFLSFFDEMVSKGCVLNLIAFNTIIEALGKNKMVDKVIFVLSKMVE 261

Query: 424 VGCEPDRVTYCTLIDIHAKAG---FLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGH 480
             C+P++ TY   +DI A  G    L+  +D+  +     +      YS ++  L K+GH
Sbjct: 262 NDCQPNQFTYSITLDILATEGQLHRLNEVLDICSRFMNRSI------YSYLVKSLCKSGH 315

Query: 481 LQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSI 540
              AH +FC M N     +   +  M+ +   A     A+ L   M   G   D   Y++
Sbjct: 316 ASEAHNVFCRMWNSHEKGDRDAFVSMLEVLCNAEKTLEAIDLLHMMPEKGIVTDVGMYNM 375

Query: 541 VMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAG 600
           V   LG    +     +F +M+    +PD   Y +++  +G+ G V KA E +E M  + 
Sbjct: 376 VFSALGKLKQVSFISNLFDKMKTNGIIPDVFTYNIMISSYGRVGLVDKASELFEVMEASS 435

Query: 601 LRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMG 660
            +P+V T NSL++   + G L +A+ L + M   G  P + TY++L+ C  ++       
Sbjct: 436 CKPDVVTYNSLINCLGKHGDLDEAHMLFKEMQEKGYDPDVFTYSILIECFGKS------- 488

Query: 661 FCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRESKRGLVDAVVDFL 720
                                       N  +   S  + M SE         + ++D L
Sbjct: 489 ----------------------------NKVEMACSLFDEMISEGCTPNIVTYNILLDCL 520

Query: 721 HKSGLKEEAGSVWEVAAQKNVYPDAV 746
            + G  EEA  ++E   Q+ + PD++
Sbjct: 521 ERRGKTEEAHKLYETMKQQGLIPDSI 546



 Score =  132 bits (332), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 70/227 (30%), Positives = 122/227 (53%)

Query: 357 KHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALD 416
           K D   + +M+ +L  A +      LL  M   G   +V  YN +  + G+   ++   +
Sbjct: 332 KGDRDAFVSMLEVLCNAEKTLEAIDLLHMMPEKGIVTDVGMYNMVFSALGKLKQVSFISN 391

Query: 417 VFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLG 476
           +F +M+  G  PD  TY  +I  + + G +D A ++++ M+A+   PD  TY+ +INCLG
Sbjct: 392 LFDKMKTNGIIPDVFTYNIMISSYGRVGLVDKASELFEVMEASSCKPDVVTYNSLINCLG 451

Query: 477 KAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKV 536
           K G L  AH LF EM  +G  P++ TY+I+I    K+   + A  L+ +M + G  P+ V
Sbjct: 452 KHGDLDEAHMLFKEMQEKGYDPDVFTYSILIECFGKSNKVEMACSLFDEMISEGCTPNIV 511

Query: 537 TYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKA 583
           TY+I+++ L   G  +EA  ++  M+++  +PD   Y +L  L  ++
Sbjct: 512 TYNILLDCLERRGKTEEAHKLYETMKQQGLIPDSITYSILERLESRS 558



 Score =  114 bits (284), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 55/160 (34%), Positives = 96/160 (60%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           G   D  TY  M+   GR       ++L + M    C+P+VVTYN LI+  G+   L+EA
Sbjct: 400 GIIPDVFTYNIMISSYGRVGLVDKASELFEVMEASSCKPDVVTYNSLINCLGKHGDLDEA 459

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
             +FK+MQ  G +PD  TY  LI+   K+  +++A  ++ +M + G +P+  TY+++++C
Sbjct: 460 HMLFKEMQEKGYDPDVFTYSILIECFGKSNKVEMACSLFDEMISEGCTPNIVTYNILLDC 519

Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKAR 514
           L + G  + AH+L+  M  QG IP+ +TY+I+  L+++++
Sbjct: 520 LERRGKTEEAHKLYETMKQQGLIPDSITYSILERLESRSQ 559



 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 27/92 (29%), Positives = 50/92 (54%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           ++ G+  D  TY+ ++   G++ +      L D+M+ +GC PN+VTYN L+    R    
Sbjct: 467 QEKGYDPDVFTYSILIECFGKSNKVEMACSLFDEMISEGCTPNIVTYNILLDCLERRGKT 526

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKA 443
            EA  +++ M+  G  PD +TY  L  + +++
Sbjct: 527 EEAHKLYETMKQQGLIPDSITYSILERLESRS 558


>gi|326517954|dbj|BAK07229.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 549

 Score =  161 bits (408), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 92/323 (28%), Positives = 162/323 (50%), Gaps = 2/323 (0%)

Query: 331 NQVLKQL-QDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRD 389
           +++L++   D   A GFF W   Q G++H   +Y +MV ILG+ +QF  +  L+ QM   
Sbjct: 130 DKILRRFGSDWVAAFGFFMWAGAQEGYRHSADSYNSMVDILGKFKQFDLMWGLISQMDEI 189

Query: 390 GCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVA 449
           G   ++ T  +++     A+   +A+D F +M   G   D      L+D   K   +  A
Sbjct: 190 GGLVSLATMTKVMRRLAGASRWTDAIDAFNKMDQFGVVKDTTAMNVLLDTLCKERSVKRA 249

Query: 450 MDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIAL 509
              +++++ + + PD  +++ +++   KA  +  A  +  EM   G  P+++TY  +I  
Sbjct: 250 RGAFQELRGS-VPPDESSFNTLVHGWCKARMMNEARDMMKEMEEHGFKPSVITYTSLIEA 308

Query: 510 QAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPD 569
               +++Q+   +  +M++ G  P+ +TY+IVM  LG  G   EA  +F ++R     PD
Sbjct: 309 YCMEKDFQTVYAILNEMRSKGCPPNVITYTIVMHALGKAGRTQEALDIFDKVRGDGCAPD 368

Query: 570 EPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQ 629
              Y  L+ + G+AG +  A    + M   G+RP V T N+L+SA     Q  +A  +L 
Sbjct: 369 ASFYNSLIYILGRAGRLEDANSVVDKMRMTGVRPTVATFNTLISAACDHSQAENALKMLV 428

Query: 630 GMLNLGLKPSLQTYTLLLSCCTE 652
            M     KP ++TYT LL  C +
Sbjct: 429 KMEEQSCKPDIKTYTPLLKLCCK 451



 Score =  120 bits (301), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 72/265 (27%), Positives = 126/265 (47%), Gaps = 2/265 (0%)

Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLI 402
           A G F  LR       DE ++ T+V    +AR       ++ +M   G +P+V+TY  LI
Sbjct: 249 ARGAFQELR--GSVPPDESSFNTLVHGWCKARMMNEARDMMKEMEEHGFKPSVITYTSLI 306

Query: 403 HSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLS 462
            +Y           +  +M+  GC P+ +TY  ++    KAG    A+D++ K++  G +
Sbjct: 307 EAYCMEKDFQTVYAILNEMRSKGCPPNVITYTIVMHALGKAGRTQEALDIFDKVRGDGCA 366

Query: 463 PDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKL 522
           PD   Y+ +I  LG+AG L+ A+ +  +M   G  P + T+N +I+        ++ALK+
Sbjct: 367 PDASFYNSLIYILGRAGRLEDANSVVDKMRMTGVRPTVATFNTLISAACDHSQAENALKM 426

Query: 523 YRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGK 582
              M+    +PD  TY+ ++++     ++     +   M RK+  PD   Y LLV    +
Sbjct: 427 LVKMEEQSCKPDIKTYTPLLKLCCKRQWIKVLRFLICHMFRKDITPDFSTYTLLVTWLCR 486

Query: 583 AGNVRKAWEWYEAMLQAGLRPNVPT 607
            G   ++  + E M+  G  P   T
Sbjct: 487 NGKPAQSCLFLEEMVLKGFAPKKET 511



 Score =  116 bits (291), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 71/256 (27%), Positives = 126/256 (49%), Gaps = 16/256 (6%)

Query: 329 QANQVLKQLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVR 388
           +A  ++K++++H              GFK    TYT+++      + F  +  +L++M  
Sbjct: 282 EARDMMKEMEEH--------------GFKPSVITYTSLIEAYCMEKDFQTVYAILNEMRS 327

Query: 389 DGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDV 448
            GC PNV+TY  ++H+ G+A    EALD+F +++  GC PD   Y +LI I  +AG L+ 
Sbjct: 328 KGCPPNVITYTIVMHALGKAGRTQEALDIFDKVRGDGCAPDASFYNSLIYILGRAGRLED 387

Query: 449 AMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIA 508
           A  +  KM+  G+ P   T++ +I+        + A ++  +M  Q C P++ TY  ++ 
Sbjct: 388 ANSVVDKMRMTGVRPTVATFNTLISAACDHSQAENALKMLVKMEEQSCKPDIKTYTPLLK 447

Query: 509 LQAKARNYQSALK-LYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWV 567
           L  K R +   L+ L   M      PD  TY++++  L   G   ++     EM  K + 
Sbjct: 448 LCCK-RQWIKVLRFLICHMFRKDITPDFSTYTLLVTWLCRNGKPAQSCLFLEEMVLKGFA 506

Query: 568 PDEPVYGLLVDLWGKA 583
           P +  + L+ +   KA
Sbjct: 507 PKKETFDLVAEKLDKA 522



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 51/179 (28%), Positives = 87/179 (48%), Gaps = 2/179 (1%)

Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLI 402
           AL  F+ +R   G   D   Y +++ ILGRA +    N ++D+M   G +P V T+N LI
Sbjct: 353 ALDIFDKVRGD-GCAPDASFYNSLIYILGRAGRLEDANSVVDKMRMTGVRPTVATFNTLI 411

Query: 403 HSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLS 462
            +    +    AL +  +M+   C+PD  TY  L+ +  K  ++ V   +   M    ++
Sbjct: 412 SAACDHSQAENALKMLVKMEEQSCKPDIKTYTPLLKLCCKRQWIKVLRFLICHMFRKDIT 471

Query: 463 PDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALK 521
           PD  TY++++  L + G    +     EMV +G  P   T++ ++A +    N  SA K
Sbjct: 472 PDFSTYTLLVTWLCRNGKPAQSCLFLEEMVLKGFAPKKETFD-LVAEKLDKANLHSAKK 529


>gi|15238925|ref|NP_199046.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75154282|sp|Q8L844.1|PP413_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g42310, mitochondrial; Flags: Precursor
 gi|21539517|gb|AAM53311.1| maize crp1 protein-like [Arabidopsis thaliana]
 gi|332007411|gb|AED94794.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 709

 Score =  161 bits (408), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 91/316 (28%), Positives = 157/316 (49%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           G   DEHTY+ ++     A ++ +   +L +M     QPN   ++RL+  +       + 
Sbjct: 369 GVSPDEHTYSLLIDAYVNAGRWESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKT 428

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
             V K+M+ +G +PDR  Y  +ID   K   LD AM  + +M + G+ PD  T++ +I+C
Sbjct: 429 FQVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDC 488

Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPD 534
             K G    A ++F  M  +GC+P   TYNIMI        +    +L   M++ G  P+
Sbjct: 489 HCKHGRHIVAEEMFEAMERRGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPN 548

Query: 535 KVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYE 594
            VT++ +++V G  G  ++A     EM+     P   +Y  L++ + + G   +A   + 
Sbjct: 549 VVTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFR 608

Query: 595 AMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEAR 654
            M   GL+P++   NSL++AF    + ++A+ +LQ M   G+KP + TYT L+       
Sbjct: 609 VMTSDGLKPSLLALNSLINAFGEDRRDAEAFAVLQYMKENGVKPDVVTYTTLMKALIRVD 668

Query: 655 SPYDMGFCHELMAVSG 670
               +   +E M +SG
Sbjct: 669 KFQKVPVVYEEMIMSG 684



 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 89/332 (26%), Positives = 158/332 (47%), Gaps = 21/332 (6%)

Query: 325 MDAY-------QANQVLKQLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFG 377
           +DAY        A  VLK+++   V    F + R  AGF+       T            
Sbjct: 381 IDAYVNAGRWESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTF----------- 429

Query: 378 AINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLI 437
              ++L +M   G +P+   YN +I ++G+ N L+ A+  F +M   G EPDRVT+ TLI
Sbjct: 430 ---QVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLI 486

Query: 438 DIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCI 497
           D H K G   VA +M++ M+  G  P   TY+++IN  G         +L  +M +QG +
Sbjct: 487 DCHCKHGRHIVAEEMFEAMERRGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGIL 546

Query: 498 PNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAV 557
           PN+VT+  ++ +  K+  +  A++   +M++ G +P    Y+ ++      G  ++A   
Sbjct: 547 PNVVTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNA 606

Query: 558 FAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLR 617
           F  M      P       L++ +G+     +A+   + M + G++P+V T  +L+ A +R
Sbjct: 607 FRVMTSDGLKPSLLALNSLINAFGEDRRDAEAFAVLQYMKENGVKPDVVTYTTLMKALIR 666

Query: 618 VGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSC 649
           V +      + + M+  G KP  +  ++L S 
Sbjct: 667 VDKFQKVPVVYEEMIMSGCKPDRKARSMLRSA 698



 Score =  125 bits (315), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 79/297 (26%), Positives = 140/297 (47%), Gaps = 4/297 (1%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           G      T  +++  L  + +      L +++ + G +P    YN L+  Y +   L +A
Sbjct: 299 GLSAKTATLVSIISALADSGRTLEAEALFEELRQSGIKPRTRAYNALLKGYVKTGPLKDA 358

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
             +  +M+  G  PD  TY  LID +  AG  + A  + K+M+A  + P++F +S ++  
Sbjct: 359 ESMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWESARIVLKEMEAGDVQPNSFVFSRLLAG 418

Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPD 534
               G  Q   Q+  EM + G  P+   YN++I    K      A+  +  M + G EPD
Sbjct: 419 FRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPD 478

Query: 535 KVTYSIVMEVLGHC--GYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEW 592
           +VT++ +++   HC  G    AE +F  M R+  +P    Y ++++ +G           
Sbjct: 479 RVTWNTLIDC--HCKHGRHIVAEEMFEAMERRGCLPCATTYNIMINSYGDQERWDDMKRL 536

Query: 593 YEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSC 649
              M   G+ PNV T  +L+  + + G+ +DA   L+ M ++GLKPS   Y  L++ 
Sbjct: 537 LGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKPSSTMYNALINA 593



 Score =  125 bits (313), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 81/303 (26%), Positives = 144/303 (47%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           RQ+G K     Y  ++    +         ++ +M + G  P+  TY+ LI +Y  A   
Sbjct: 331 RQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAYVNAGRW 390

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
             A  V K+M+    +P+   +  L+      G       + K+M++ G+ PD   Y+V+
Sbjct: 391 ESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVV 450

Query: 472 INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF 531
           I+  GK   L  A   F  M+++G  P+ VT+N +I    K   +  A +++  M+  G 
Sbjct: 451 IDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRGC 510

Query: 532 EPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWE 591
            P   TY+I++   G     D+ + +  +M+ +  +P+   +  LVD++GK+G    A E
Sbjct: 511 LPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIE 570

Query: 592 WYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCT 651
             E M   GL+P+    N+L++A+ + G    A +  + M + GLKPSL     L++   
Sbjct: 571 CLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRVMTSDGLKPSLLALNSLINAFG 630

Query: 652 EAR 654
           E R
Sbjct: 631 EDR 633



 Score =  110 bits (275), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 101/476 (21%), Positives = 199/476 (41%), Gaps = 47/476 (9%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAIN--KLLDQMVRDGCQPNVVTYNRLIHSYGRAN 409
           RQ G++ D   Y+ ++  L R+ +  ++   +L  ++ RD  + +V   N +I  + ++ 
Sbjct: 224 RQDGYQSDFVNYSLVIQSLTRSNKIDSVMLLRLYKEIERDKLELDVQLVNDIIMGFAKSG 283

Query: 410 YLNEALDV-----------------------------------FKQMQVVGCEPDRVTYC 434
             ++AL +                                   F++++  G +P    Y 
Sbjct: 284 DPSKALQLLGMAQATGLSAKTATLVSIISALADSGRTLEAEALFEELRQSGIKPRTRAYN 343

Query: 435 TLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQ 494
            L+  + K G L  A  M  +M+  G+SPD  TYS++I+    AG  ++A  +  EM   
Sbjct: 344 ALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWESARIVLKEMEAG 403

Query: 495 GCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEA 554
              PN   ++ ++A       +Q   ++ ++M++ G +PD+  Y++V++  G    LD A
Sbjct: 404 DVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHA 463

Query: 555 EAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSA 614
              F  M  +   PD   +  L+D   K G    A E +EAM + G  P   T N ++++
Sbjct: 464 MTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRGCLPCATTYNIMINS 523

Query: 615 FLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGFCHELMAVSGHPAH 674
           +    +  D   LL  M + G+ P++ T+T L+    ++    D   C E M   G    
Sbjct: 524 YGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKPS 583

Query: 675 MFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRESKRGLVDAVVDFLHKSGLKEEAGSVWE 734
             + +        + + +   +   +M S+  +     ++++++   +     EA +V +
Sbjct: 584 STMYNALINAYAQRGLSEQAVNAFRVMTSDGLKPSLLALNSLINAFGEDRRDAEAFAVLQ 643

Query: 735 VAAQKNVYPDAVKEKGMSYWLINLHVMSDGTAVIALSRTLAWFRKQMLISGVGPSR 790
              +  V PD V    +   LI +        V           ++M++SG  P R
Sbjct: 644 YMKENGVKPDVVTYTTLMKALIRVDKFQKVPVVY----------EEMIMSGCKPDR 689



 Score =  108 bits (270), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 78/296 (26%), Positives = 134/296 (45%), Gaps = 3/296 (1%)

Query: 362 TYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA--LDVFK 419
           TY  ++G   R         L+ +M +DG Q + V Y+ +I S  R+N ++    L ++K
Sbjct: 199 TYNALIGACARNNDIEKALNLIAKMRQDGYQSDFVNYSLVIQSLTRSNKIDSVMLLRLYK 258

Query: 420 QMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAG 479
           +++    E D      +I   AK+G    A+ +    QA GLS  T T   II+ L  +G
Sbjct: 259 EIERDKLELDVQLVNDIIMGFAKSGDPSKALQLLGMAQATGLSAKTATLVSIISALADSG 318

Query: 480 HLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYS 539
               A  LF E+   G  P    YN ++    K    + A  +  +M+  G  PD+ TYS
Sbjct: 319 RTLEAEALFEELRQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYS 378

Query: 540 IVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQA 599
           ++++   + G  + A  V  EM   +  P+  V+  L+  +   G  +K ++  + M   
Sbjct: 379 LLIDAYVNAGRWESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSI 438

Query: 600 GLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSC-CTEAR 654
           G++P+    N ++  F +   L  A      ML+ G++P   T+  L+ C C   R
Sbjct: 439 GVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGR 494



 Score =  102 bits (253), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 82/325 (25%), Positives = 150/325 (46%), Gaps = 13/325 (4%)

Query: 342 VALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRL 401
           +A    +WL++       E  Y+ ++  LGR+ +      LL Q  +    P  +TYN L
Sbjct: 149 LAYAVVSWLQKHNLCFSYELLYSILIHALGRSEKLYEAF-LLSQ--KQTLTP--LTYNAL 203

Query: 402 IHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAM--DMYKKMQAA 459
           I +  R N + +AL++  +M+  G + D V Y  +I    ++  +D  M   +YK+++  
Sbjct: 204 IGACARNNDIEKALNLIAKMRQDGYQSDFVNYSLVIQSLTRSNKIDSVMLLRLYKEIERD 263

Query: 460 GLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSA 519
            L  D    + II    K+G    A QL       G      T   +I+  A +     A
Sbjct: 264 KLELDVQLVNDIIMGFAKSGDPSKALQLLGMAQATGLSAKTATLVSIISALADSGRTLEA 323

Query: 520 LKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDL 579
             L+ +++ +G +P    Y+ +++     G L +AE++ +EM ++   PDE  Y LL+D 
Sbjct: 324 EALFEELRQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDA 383

Query: 580 WGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPS 639
           +  AG    A    + M    ++PN    + LL+ F   G+    + +L+ M ++G+KP 
Sbjct: 384 YVNAGRWESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPD 443

Query: 640 LQTYTLLL------SCCTEARSPYD 658
            Q Y +++      +C   A + +D
Sbjct: 444 RQFYNVVIDTFGKFNCLDHAMTTFD 468



 Score = 99.4 bits (246), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 56/208 (26%), Positives = 102/208 (49%), Gaps = 1/208 (0%)

Query: 340 HTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYN 399
           H VA   F  + R+ G      TY  M+   G   ++  + +LL +M   G  PNVVT+ 
Sbjct: 495 HIVAEEMFEAMERR-GCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHT 553

Query: 400 RLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAA 459
            L+  YG++   N+A++  ++M+ VG +P    Y  LI+ +A+ G  + A++ ++ M + 
Sbjct: 554 TLVDVYGKSGRFNDAIECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRVMTSD 613

Query: 460 GLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSA 519
           GL P     + +IN  G+      A  +   M   G  P++VTY  ++    +   +Q  
Sbjct: 614 GLKPSLLALNSLINAFGEDRRDAEAFAVLQYMKENGVKPDVVTYTTLMKALIRVDKFQKV 673

Query: 520 LKLYRDMQNAGFEPDKVTYSIVMEVLGH 547
             +Y +M  +G +PD+   S++   L +
Sbjct: 674 PVVYEEMIMSGCKPDRKARSMLRSALRY 701


>gi|302781560|ref|XP_002972554.1| hypothetical protein SELMODRAFT_97435 [Selaginella moellendorffii]
 gi|300160021|gb|EFJ26640.1| hypothetical protein SELMODRAFT_97435 [Selaginella moellendorffii]
          Length = 581

 Score =  161 bits (408), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 115/393 (29%), Positives = 192/393 (48%), Gaps = 15/393 (3%)

Query: 363 YTTMVGILGRARQFG-AINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQM 421
           Y  ++  L RA +   A+     +M RDG  P +VTYN +I+   ++N L   +++F+++
Sbjct: 48  YNIVLQSLCRAGETARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNELGAGMELFEEL 107

Query: 422 QVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHL 481
              G  PD VTY TLID   KAG L+ A  ++  M + G  P+  TYSV+IN L K G +
Sbjct: 108 VKRGHHPDVVTYNTLIDSLCKAGDLEEARRLHGGMSSRGCVPNVVTYSVLINGLCKVGRI 167

Query: 482 QAAHQLFCEMVNQGC--IPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFE--PDKVT 537
             A +L  EM  + C  +PN++TYN  +    K      A +L R +++      PD VT
Sbjct: 168 DEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDTVT 227

Query: 538 YSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAML 597
           +S +++ L  CG  D  EA   +M    +VP+   Y  LV+   KA  + +A    E+M+
Sbjct: 228 FSTLIDGLCKCGQTD--EACNDDMIAGGYVPNVVTYNALVNGLCKADKMERAHAMIESMV 285

Query: 598 QAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTY-TLLLSCCTEARSP 656
             G+ P+V T + L+ AF +  ++ +A  LL GM + G  P++ T+ +++   C   RS 
Sbjct: 286 DKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDRSG 345

Query: 657 YDMGFCHEL---MAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRESKRGLV 713
                  ++   M V        L++    G       +   +  E M +++ +      
Sbjct: 346 EAFQIALQVYNRMLVPDKVTFNILIA----GACKAGNFEQASALFEEMVAKNMQPDVMTF 401

Query: 714 DAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAV 746
            A++D L K+G  E A  + ++     V P+ V
Sbjct: 402 GALIDGLCKAGQVEAARDILDLMGNLGVPPNVV 434



 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 106/389 (27%), Positives = 188/389 (48%), Gaps = 8/389 (2%)

Query: 362 TYTTMVGILGRARQFGAINKLLDQMVRDGCQ--PNVVTYNRLIHSYGRANYLNEALDVFK 419
           TY+ ++  L +  +     +L+ +M R  C   PN++TYN  +    + +   EA ++ +
Sbjct: 153 TYSVLINGLCKVGRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMR 212

Query: 420 QMQ--VVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGK 477
            ++   +   PD VT+ TLID   K G  D A +    M A G  P+  TY+ ++N L K
Sbjct: 213 SLRDGSLRVSPDTVTFSTLIDGLCKCGQTDEACN--DDMIAGGYVPNVVTYNALVNGLCK 270

Query: 478 AGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVT 537
           A  ++ AH +   MV++G  P+++TY++++    KA     AL+L   M + G  P+ VT
Sbjct: 271 ADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVVT 330

Query: 538 YSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAML 597
           ++ +++ L       EA  +  ++  +  VPD+  + +L+    KAGN  +A   +E M+
Sbjct: 331 FNSIIDGLCKSDRSGEAFQIALQVYNRMLVPDKVTFNILIAGACKAGNFEQASALFEEMV 390

Query: 598 QAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL-SCCTEARSP 656
              ++P+V T  +L+    + GQ+  A  +L  M NLG+ P++ TY +L+   C   R  
Sbjct: 391 AKNMQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNVLVHGLCKSGRIE 450

Query: 657 YDMGFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRESKRGLVDAV 716
               F  E+++    P  M   S+           D +   +  + S   +      + +
Sbjct: 451 EPCEFLEEMVSSGCVPESMTYGSLVYALCRASRTDDAL-QLVSKLKSFGWDPDTVTYNIL 509

Query: 717 VDFLHKSGLKEEAGSVWEVAAQKNVYPDA 745
           VD L KSG  E+A +V E    K   PD+
Sbjct: 510 VDGLWKSGKTEQAITVLEEMVGKGHQPDS 538



 Score =  143 bits (361), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 87/290 (30%), Positives = 149/290 (51%), Gaps = 4/290 (1%)

Query: 359 DEHTYTTMVGILGRARQFG-AINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDV 417
           D  T++T++  L +  Q   A N   D M+  G  PNVVTYN L++   +A+ +  A  +
Sbjct: 224 DTVTFSTLIDGLCKCGQTDEACN---DDMIAGGYVPNVVTYNALVNGLCKADKMERAHAM 280

Query: 418 FKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGK 477
            + M   G  PD +TY  L+D   KA  +D A+++   M + G +P+  T++ II+ L K
Sbjct: 281 IESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVVTFNSIIDGLCK 340

Query: 478 AGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVT 537
           +     A Q+  ++ N+  +P+ VT+NI+IA   KA N++ A  L+ +M     +PD +T
Sbjct: 341 SDRSGEAFQIALQVYNRMLVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNMQPDVMT 400

Query: 538 YSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAML 597
           +  +++ L   G ++ A  +   M      P+   Y +LV    K+G + +  E+ E M+
Sbjct: 401 FGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNVLVHGLCKSGRIEEPCEFLEEMV 460

Query: 598 QAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
            +G  P   T  SL+ A  R  +  DA  L+  + + G  P   TY +L+
Sbjct: 461 SSGCVPESMTYGSLVYALCRASRTDDALQLVSKLKSFGWDPDTVTYNILV 510



 Score =  142 bits (358), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 89/297 (29%), Positives = 148/297 (49%), Gaps = 8/297 (2%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNE- 413
           G   D  TY+ +V    +A +     +LL  M   GC PNVVT+N +I    +++   E 
Sbjct: 288 GVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDRSGEA 347

Query: 414 ---ALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSV 470
              AL V+ +M V    PD+VT+  LI    KAG  + A  ++++M A  + PD  T+  
Sbjct: 348 FQIALQVYNRMLV----PDKVTFNILIAGACKAGNFEQASALFEEMVAKNMQPDVMTFGA 403

Query: 471 IINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAG 530
           +I+ L KAG ++AA  +   M N G  PN+VTYN+++    K+   +   +   +M ++G
Sbjct: 404 LIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNVLVHGLCKSGRIEEPCEFLEEMVSSG 463

Query: 531 FEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAW 590
             P+ +TY  ++  L      D+A  + ++++   W PD   Y +LVD   K+G   +A 
Sbjct: 464 CVPESMTYGSLVYALCRASRTDDALQLVSKLKSFGWDPDTVTYNILVDGLWKSGKTEQAI 523

Query: 591 EWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
              E M+  G +P+  T  +      R G L+    LL+ +L  G+ P   T + +L
Sbjct: 524 TVLEEMVGKGHQPDSFTFAACFGGLHRSGNLAGTMELLRVVLAKGMLPDATTCSSIL 580



 Score = 97.1 bits (240), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 55/185 (29%), Positives = 96/185 (51%)

Query: 359 DEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVF 418
           D  T+  ++  L +A Q  A   +LD M   G  PNVVTYN L+H   ++  + E  +  
Sbjct: 397 DVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNVLVHGLCKSGRIEEPCEFL 456

Query: 419 KQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKA 478
           ++M   GC P+ +TY +L+    +A   D A+ +  K+++ G  PDT TY+++++ L K+
Sbjct: 457 EEMVSSGCVPESMTYGSLVYALCRASRTDDALQLVSKLKSFGWDPDTVTYNILVDGLWKS 516

Query: 479 GHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTY 538
           G  + A  +  EMV +G  P+  T+        ++ N    ++L R +   G  PD  T 
Sbjct: 517 GKTEQAITVLEEMVGKGHQPDSFTFAACFGGLHRSGNLAGTMELLRVVLAKGMLPDATTC 576

Query: 539 SIVME 543
           S +++
Sbjct: 577 SSILD 581



 Score = 49.7 bits (117), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 32/120 (26%), Positives = 60/120 (50%)

Query: 354 AGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNE 413
           +G   +  TY ++V  L RA +     +L+ ++   G  P+ VTYN L+    ++    +
Sbjct: 462 SGCVPESMTYGSLVYALCRASRTDDALQLVSKLKSFGWDPDTVTYNILVDGLWKSGKTEQ 521

Query: 414 ALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIIN 473
           A+ V ++M   G +PD  T+        ++G L   M++ + + A G+ PD  T S I++
Sbjct: 522 AITVLEEMVGKGHQPDSFTFAACFGGLHRSGNLAGTMELLRVVLAKGMLPDATTCSSILD 581


>gi|449508067|ref|XP_004163208.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Cucumis sativus]
          Length = 830

 Score =  161 bits (408), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 94/295 (31%), Positives = 155/295 (52%)

Query: 354 AGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNE 413
           +G +    T+ TM+ IL +  +      ++  + R    PN  TY  LI  + R + L+ 
Sbjct: 196 SGIRPSLLTFNTMINILCKKGRVQEAKLIMSHIFRYDAYPNAFTYTSLILGHCRNHNLDL 255

Query: 414 ALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIIN 473
           A  +F +M   GC+P+ VTY TLI+     G L+ AMDM ++M   G+ P  +TY++ + 
Sbjct: 256 AFAMFDRMVKDGCDPNSVTYSTLINGLCSEGRLEEAMDMLEEMVQKGIEPTVYTYTIPLV 315

Query: 474 CLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEP 533
            L  AG    A +L  +M  +GC+PN+ T+  +I+  ++   ++ A+ LY  M   G  P
Sbjct: 316 SLCDAGCSSEAVELLGKMKKRGCVPNIQTFTALISGLSRDGKFEIAIGLYHKMLADGLVP 375

Query: 534 DKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWY 593
             VTY+ ++  L   G  + A  +F  M     +P    Y  ++  +   G+++KA   +
Sbjct: 376 TTVTYNALINQLCVEGRFETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIF 435

Query: 594 EAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
           + ML+AG  PNV T N+L+  + + G L++A  LL+ M   GLKP   TYT L+S
Sbjct: 436 DKMLKAGSSPNVITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELIS 490



 Score =  145 bits (366), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 91/298 (30%), Positives = 151/298 (50%), Gaps = 8/298 (2%)

Query: 356 FKHDEH----TYTTMVGILGRARQ--FGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRAN 409
           F++D +    TYT++  ILG  R         + D+MV+DGC PN VTY+ LI+      
Sbjct: 229 FRYDAYPNAFTYTSL--ILGHCRNHNLDLAFAMFDRMVKDGCDPNSVTYSTLINGLCSEG 286

Query: 410 YLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYS 469
            L EA+D+ ++M   G EP   TY   +     AG    A+++  KM+  G  P+  T++
Sbjct: 287 RLEEAMDMLEEMVQKGIEPTVYTYTIPLVSLCDAGCSSEAVELLGKMKKRGCVPNIQTFT 346

Query: 470 VIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNA 529
            +I+ L + G  + A  L+ +M+  G +P  VTYN +I        +++A  +++ M + 
Sbjct: 347 ALISGLSRDGKFEIAIGLYHKMLADGLVPTTVTYNALINQLCVEGRFETAFTIFKWMLSH 406

Query: 530 GFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKA 589
           G  P   TY+ +++     G + +A  +F +M +    P+   Y  L+  + K GN+  A
Sbjct: 407 GSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKMLKAGSSPNVITYNTLIYGYCKQGNLNNA 466

Query: 590 WEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
               E M   GL+P+  T   L+S F R G+L  A  L  GM+  G+ P+  TYT ++
Sbjct: 467 MRLLEIMKGNGLKPDAWTYTELISGFSRGGKLEHATSLFYGMMEHGISPNHVTYTAII 524



 Score =  144 bits (362), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 95/335 (28%), Positives = 171/335 (51%), Gaps = 12/335 (3%)

Query: 323 YSMDAY-----QANQVLKQLQDHTVALGFFNWLRR-QAGFKHDEHTYTTMV-GILGRARQ 375
           +  DAY       + +L   ++H + L F  + R  + G   +  TY+T++ G+    R 
Sbjct: 229 FRYDAYPNAFTYTSLILGHCRNHNLDLAFAMFDRMVKDGCDPNSVTYSTLINGLCSEGRL 288

Query: 376 FGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCT 435
             A++ +L++MV+ G +P V TY   + S   A   +EA+++  +M+  GC P+  T+  
Sbjct: 289 EEAMD-MLEEMVQKGIEPTVYTYTIPLVSLCDAGCSSEAVELLGKMKKRGCVPNIQTFTA 347

Query: 436 LIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQG 495
           LI   ++ G  ++A+ +Y KM A GL P T TY+ +IN L   G  + A  +F  M++ G
Sbjct: 348 LISGLSRDGKFEIAIGLYHKMLADGLVPTTVTYNALINQLCVEGRFETAFTIFKWMLSHG 407

Query: 496 CIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHC--GYLDE 553
            +P+  TYN +I       + Q A+ ++  M  AG  P+ +TY+ +  + G+C  G L+ 
Sbjct: 408 SLPSTQTYNEIIKCFCLMGDIQKAMVIFDKMLKAGSSPNVITYNTL--IYGYCKQGNLNN 465

Query: 554 AEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLS 613
           A  +   M+     PD   Y  L+  + + G +  A   +  M++ G+ PN  T  +++ 
Sbjct: 466 AMRLLEIMKGNGLKPDAWTYTELISGFSRGGKLEHATSLFYGMMEHGISPNHVTYTAIID 525

Query: 614 AFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
            +  + ++ DA  L   M+  G  PS QTY +++S
Sbjct: 526 GYFNLAKVDDALALFWKMVESGNLPSSQTYNVMIS 560



 Score =  140 bits (352), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 91/314 (28%), Positives = 148/314 (47%), Gaps = 1/314 (0%)

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
           Q G +   +TYT  +  L  A       +LL +M + GC PN+ T+  LI    R     
Sbjct: 300 QKGIEPTVYTYTIPLVSLCDAGCSSEAVELLGKMKKRGCVPNIQTFTALISGLSRDGKFE 359

Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
            A+ ++ +M   G  P  VTY  LI+     G  + A  ++K M + G  P T TY+ II
Sbjct: 360 IAIGLYHKMLADGLVPTTVTYNALINQLCVEGRFETAFTIFKWMLSHGSLPSTQTYNEII 419

Query: 473 NCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFE 532
            C    G +Q A  +F +M+  G  PN++TYN +I    K  N  +A++L   M+  G +
Sbjct: 420 KCFCLMGDIQKAMVIFDKMLKAGSSPNVITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLK 479

Query: 533 PDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEW 592
           PD  TY+ ++      G L+ A ++F  M      P+   Y  ++D +     V  A   
Sbjct: 480 PDAWTYTELISGFSRGGKLEHATSLFYGMMEHGISPNHVTYTAIIDGYFNLAKVDDALAL 539

Query: 593 YEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS-CCT 651
           +  M+++G  P+  T N ++S F +   +S+A +    M+  GL P++ TYT  +   C 
Sbjct: 540 FWKMVESGNLPSSQTYNVMISGFSKTNSISEAENFCGKMVKQGLLPNVITYTSFIDGLCR 599

Query: 652 EARSPYDMGFCHEL 665
             R+       HE+
Sbjct: 600 NGRTGLAFKIFHEM 613



 Score =  131 bits (329), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 115/427 (26%), Positives = 187/427 (43%), Gaps = 42/427 (9%)

Query: 362 TYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQM 421
           TY  ++  L    +F     +   M+  G  P+  TYN +I  +     + +A+ +F +M
Sbjct: 379 TYNALINQLCVEGRFETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKM 438

Query: 422 QVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHL 481
              G  P+ +TY TLI  + K G L+ AM + + M+  GL PD +TY+ +I+   + G L
Sbjct: 439 LKAGSSPNVITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGFSRGGKL 498

Query: 482 QAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIV 541
           + A  LF  M+  G  PN VTY  +I           AL L+  M  +G  P   TY+++
Sbjct: 499 EHATSLFYGMMEHGISPNHVTYTAIIDGYFNLAKVDDALALFWKMVESGNLPSSQTYNVM 558

Query: 542 MEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGL 601
           +        + EAE    +M ++  +P+   Y   +D   + G    A++ +  M +   
Sbjct: 559 ISGFSKTNSISEAENFCGKMVKQGLLPNVITYTSFIDGLCRNGRTGLAFKIFHEMEKRNY 618

Query: 602 RPNVPTCNSLLSAFLRVGQLSDA--YHLLQGMLNLGLKPSLQTYTLLLS-CCTEARSPYD 658
            PN+ T +SL+    + G+  DA  Y+LL  + + G +P++ TYT L+   C E R    
Sbjct: 619 FPNLYTYSSLIYGLCQEGRAEDAEMYNLLARLTHYGCEPNVDTYTTLVKGLCGEGR---- 674

Query: 659 MGFCHELMAVSGHPAHMFLLSMPSPGPD-----------GQNVRDHVGSFLEMMHSEDRE 707
              C+E        A   ++SM   G             G+     V S L + +S D  
Sbjct: 675 ---CYE--------ADQLVVSMQKKGLQPSEEIYRALLIGECKNLKVESALNIFYSMDTL 723

Query: 708 S-KRGLVD--AVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAV----------KEKGMSYW 754
             +  L D  A++  L K    EEA  +++   +K+   D V          KE      
Sbjct: 724 GFQLHLSDYKALICALCKENFIEEAQCIFQTMLEKHWNSDEVAWTVLLDGLLKEGETDLC 783

Query: 755 LINLHVM 761
           L  LHVM
Sbjct: 784 LKLLHVM 790



 Score =  129 bits (325), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 85/296 (28%), Positives = 138/296 (46%), Gaps = 1/296 (0%)

Query: 361 HTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQ 420
            T+T ++  L R  +F     L  +M+ DG  P  VTYN LI+          A  +FK 
Sbjct: 343 QTFTALISGLSRDGKFEIAIGLYHKMLADGLVPTTVTYNALINQLCVEGRFETAFTIFKW 402

Query: 421 MQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGH 480
           M   G  P   TY  +I      G +  AM ++ KM  AG SP+  TY+ +I    K G+
Sbjct: 403 MLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKMLKAGSSPNVITYNTLIYGYCKQGN 462

Query: 481 LQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSI 540
           L  A +L   M   G  P+  TY  +I+  ++    + A  L+  M   G  P+ VTY+ 
Sbjct: 463 LNNAMRLLEIMKGNGLKPDAWTYTELISGFSRGGKLEHATSLFYGMMEHGISPNHVTYTA 522

Query: 541 VMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAG 600
           +++   +   +D+A A+F +M     +P    Y +++  + K  ++ +A  +   M++ G
Sbjct: 523 IIDGYFNLAKVDDALALFWKMVESGNLPSSQTYNVMISGFSKTNSISEAENFCGKMVKQG 582

Query: 601 LRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTY-TLLLSCCTEARS 655
           L PNV T  S +    R G+   A+ +   M      P+L TY +L+   C E R+
Sbjct: 583 LLPNVITYTSFIDGLCRNGRTGLAFKIFHEMEKRNYFPNLYTYSSLIYGLCQEGRA 638



 Score = 99.8 bits (247), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 77/280 (27%), Positives = 127/280 (45%), Gaps = 2/280 (0%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           G K D  TYT ++    R  +      L   M+  G  PN VTY  +I  Y     +++A
Sbjct: 477 GLKPDAWTYTELISGFSRGGKLEHATSLFYGMMEHGISPNHVTYTAIIDGYFNLAKVDDA 536

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
           L +F +M   G  P   TY  +I   +K   +  A +   KM   GL P+  TY+  I+ 
Sbjct: 537 LALFWKMVESGNLPSSQTYNVMISGFSKTNSISEAENFCGKMVKQGLLPNVITYTSFIDG 596

Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMI-ALQAKARNYQSAL-KLYRDMQNAGFE 532
           L + G    A ++F EM  +   PNL TY+ +I  L  + R   + +  L   + + G E
Sbjct: 597 LCRNGRTGLAFKIFHEMEKRNYFPNLYTYSSLIYGLCQEGRAEDAEMYNLLARLTHYGCE 656

Query: 533 PDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEW 592
           P+  TY+ +++ L   G   EA+ +   M++K   P E +Y  L+    K   V  A   
Sbjct: 657 PNVDTYTTLVKGLCGEGRCYEADQLVVSMQKKGLQPSEEIYRALLIGECKNLKVESALNI 716

Query: 593 YEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGML 632
           + +M   G + ++    +L+ A  +   + +A  + Q ML
Sbjct: 717 FYSMDTLGFQLHLSDYKALICALCKENFIEEAQCIFQTML 756



 Score = 92.4 bits (228), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 64/245 (26%), Positives = 105/245 (42%), Gaps = 5/245 (2%)

Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLI 402
           AL  F W   ++G      TY  M+    +            +MV+ G  PNV+TY   I
Sbjct: 536 ALALF-WKMVESGNLPSSQTYNVMISGFSKTNSISEAENFCGKMVKQGLLPNVITYTSFI 594

Query: 403 HSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYK---KMQAA 459
               R      A  +F +M+     P+  TY +LI    + G  + A +MY    ++   
Sbjct: 595 DGLCRNGRTGLAFKIFHEMEKRNYFPNLYTYSSLIYGLCQEGRAEDA-EMYNLLARLTHY 653

Query: 460 GLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSA 519
           G  P+  TY+ ++  L   G    A QL   M  +G  P+   Y  ++  + K    +SA
Sbjct: 654 GCEPNVDTYTTLVKGLCGEGRCYEADQLVVSMQKKGLQPSEEIYRALLIGECKNLKVESA 713

Query: 520 LKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDL 579
           L ++  M   GF+     Y  ++  L    +++EA+ +F  M  K+W  DE  + +L+D 
Sbjct: 714 LNIFYSMDTLGFQLHLSDYKALICALCKENFIEEAQCIFQTMLEKHWNSDEVAWTVLLDG 773

Query: 580 WGKAG 584
             K G
Sbjct: 774 LLKEG 778



 Score = 65.9 bits (159), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 38/152 (25%), Positives = 80/152 (52%), Gaps = 1/152 (0%)

Query: 500 LVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFA 559
           L ++  ++    K      A  +Y  M N+G  P  +T++ ++ +L   G + EA+ + +
Sbjct: 167 LCSFTTLLIQLGKFDMVDLARDMYIKMLNSGIRPSLLTFNTMINILCKKGRVQEAKLIMS 226

Query: 560 EMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVG 619
            + R +  P+   Y  L+    +  N+  A+  ++ M++ G  PN  T ++L++     G
Sbjct: 227 HIFRYDAYPNAFTYTSLILGHCRNHNLDLAFAMFDRMVKDGCDPNSVTYSTLINGLCSEG 286

Query: 620 QLSDAYHLLQGMLNLGLKPSLQTYTL-LLSCC 650
           +L +A  +L+ M+  G++P++ TYT+ L+S C
Sbjct: 287 RLEEAMDMLEEMVQKGIEPTVYTYTIPLVSLC 318



 Score = 50.1 bits (118), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 47/203 (23%), Positives = 87/203 (42%), Gaps = 5/203 (2%)

Query: 342 VALGFFNWLRRQAGFKHDEHTYTTMVGIL---GRARQFGAINKLLDQMVRDGCQPNVVTY 398
           +A   F+ + ++  F  + +TY++++  L   GRA      N LL ++   GC+PNV TY
Sbjct: 605 LAFKIFHEMEKRNYFP-NLYTYSSLIYGLCQEGRAEDAEMYN-LLARLTHYGCEPNVDTY 662

Query: 399 NRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQA 458
             L+          EA  +   MQ  G +P    Y  L+    K   ++ A++++  M  
Sbjct: 663 TTLVKGLCGEGRCYEADQLVVSMQKKGLQPSEEIYRALLIGECKNLKVESALNIFYSMDT 722

Query: 459 AGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQS 518
            G       Y  +I  L K   ++ A  +F  M+ +    + V + +++    K      
Sbjct: 723 LGFQLHLSDYKALICALCKENFIEEAQCIFQTMLEKHWNSDEVAWTVLLDGLLKEGETDL 782

Query: 519 ALKLYRDMQNAGFEPDKVTYSIV 541
            LKL   M++     +  TY ++
Sbjct: 783 CLKLLHVMESRNCTLNFQTYVML 805


>gi|449437410|ref|XP_004136485.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20300,
           mitochondrial-like [Cucumis sativus]
 gi|449519964|ref|XP_004167004.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20300,
           mitochondrial-like [Cucumis sativus]
          Length = 534

 Score =  161 bits (408), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 96/342 (28%), Positives = 161/342 (47%), Gaps = 38/342 (11%)

Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLI 402
           AL FFNW     GF+H    Y  M+ + G+ +QFG    L+D M     +  VVT++ L+
Sbjct: 131 ALAFFNWATAGEGFEHSPQPYNEMIDLAGKVKQFGLAWYLIDLMKARNVEITVVTFSMLV 190

Query: 403 HSYGRANYLNEALDVFKQMQVVGC----------------------------------EP 428
             Y RA    EA+  F +M+  GC                                  EP
Sbjct: 191 RRYVRAGLAAEAVHAFNRMEDYGCNADIIAFSNVISILCKKRRAVEAQSFFDNLKHKFEP 250

Query: 429 DRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLF 488
           D + Y +L+    +AG +  A  ++++M+ AG+SP+ +TYS++I+ L ++G +  AH +F
Sbjct: 251 DVIVYTSLVHGWCRAGDISEAESVFREMKMAGISPNVYTYSIVIDALCRSGQITRAHDVF 310

Query: 489 CEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHC 548
            EM++ GC PN VT+N +I +  +A   +  L++Y  M+      D +TY+ ++E   HC
Sbjct: 311 AEMLDAGCNPNSVTFNNLIRVHLRAGRTEKVLQVYNQMKRLRCAADLITYNFLIET--HC 368

Query: 549 --GYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVP 606
               L EA  V   M + +  P+   +  +     K+ +V  A   +  M + G +PN  
Sbjct: 369 KDDNLGEAIKVLNSMAKNDCTPNASSFNPIFRCIAKSQDVNGAHRMFARMKEVGCKPNTV 428

Query: 607 TCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
           T N L+  F         + L + M    ++P+  TY  L++
Sbjct: 429 TYNILMRMFAVPKSADMIFKLKKEMDEEEVEPNFNTYRELIA 470



 Score =  137 bits (345), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 74/251 (29%), Positives = 130/251 (51%), Gaps = 1/251 (0%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           + AG   + +TY+ ++  L R+ Q    + +  +M+  GC PN VT+N LI  + RA   
Sbjct: 279 KMAGISPNVYTYSIVIDALCRSGQITRAHDVFAEMLDAGCNPNSVTFNNLIRVHLRAGRT 338

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
            + L V+ QM+ + C  D +TY  LI+ H K   L  A+ +   M     +P+  +++ I
Sbjct: 339 EKVLQVYNQMKRLRCAADLITYNFLIETHCKDDNLGEAIKVLNSMAKNDCTPNASSFNPI 398

Query: 472 INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF 531
             C+ K+  +  AH++F  M   GC PN VTYNI++ + A  ++     KL ++M     
Sbjct: 399 FRCIAKSQDVNGAHRMFARMKEVGCKPNTVTYNILMRMFAVPKSADMIFKLKKEMDEEEV 458

Query: 532 EPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWV-PDEPVYGLLVDLWGKAGNVRKAW 590
           EP+  TY  ++ +    G+ + A   F EM  +  + P  P+Y ++++   KAG ++K  
Sbjct: 459 EPNFNTYRELIALYCGMGHWNHAYMFFREMIDEKCIKPSMPLYKMVLEELRKAGQLKKHE 518

Query: 591 EWYEAMLQAGL 601
           E  + M++ G 
Sbjct: 519 ELVDKMVERGF 529



 Score =  125 bits (313), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 70/294 (23%), Positives = 146/294 (49%), Gaps = 2/294 (0%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           G   D   ++ ++ IL + R+        D + +   +P+V+ Y  L+H + RA  ++EA
Sbjct: 213 GCNADIIAFSNVISILCKKRRAVEAQSFFDNL-KHKFEPDVIVYTSLVHGWCRAGDISEA 271

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
             VF++M++ G  P+  TY  +ID   ++G +  A D++ +M  AG +P++ T++ +I  
Sbjct: 272 ESVFREMKMAGISPNVYTYSIVIDALCRSGQITRAHDVFAEMLDAGCNPNSVTFNNLIRV 331

Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPD 534
             +AG  +   Q++ +M    C  +L+TYN +I    K  N   A+K+   M      P+
Sbjct: 332 HLRAGRTEKVLQVYNQMKRLRCAADLITYNFLIETHCKDDNLGEAIKVLNSMAKNDCTPN 391

Query: 535 KVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYE 594
             +++ +   +     ++ A  +FA M+     P+   Y +L+ ++    +    ++  +
Sbjct: 392 ASSFNPIFRCIAKSQDVNGAHRMFARMKEVGCKPNTVTYNILMRMFAVPKSADMIFKLKK 451

Query: 595 AMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLG-LKPSLQTYTLLL 647
            M +  + PN  T   L++ +  +G  + AY   + M++   +KPS+  Y ++L
Sbjct: 452 EMDEEEVEPNFNTYRELIALYCGMGHWNHAYMFFREMIDEKCIKPSMPLYKMVL 505


>gi|58013026|gb|AAW62966.1| chloroplast embryo-defective 1270 [Arabidopsis thaliana]
          Length = 1429

 Score =  161 bits (408), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 99/365 (27%), Positives = 180/365 (49%), Gaps = 5/365 (1%)

Query: 333 VLKQLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQ 392
           VL +    ++A+  F   R +         Y  M+G+  R+ +F    +L+D M + GC 
Sbjct: 200 VLGRWNQESLAVEIFT--RAEPTVGDRVQVYNAMMGVYSRSGKFSKAQELVDAMRQRGCV 257

Query: 393 PNVVTYNRLIHSYGRANYL--NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAM 450
           P+++++N LI++  ++  L  N A+++   ++  G  PD +TY TL+   ++   LD A+
Sbjct: 258 PDLISFNTLINARLKSGGLTPNLAVELLDMVRNSGLRPDAITYNTLLSACSRDSNLDGAV 317

Query: 451 DMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQ 510
            +++ M+A    PD +TY+ +I+  G+ G    A +LF E+  +G  P+ VTYN ++   
Sbjct: 318 KVFEDMEAHRCQPDLWTYNAMISVYGRCGLAAEAERLFMELELKGFFPDAVTYNSLLYAF 377

Query: 511 AKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMR-RKNWVPD 569
           A+ RN +   ++Y+ MQ  GF  D++TY+ ++ + G  G LD A  ++ +M+      PD
Sbjct: 378 ARERNTEKVKEVYQQMQKMGFGKDEMTYNTIIHMYGKQGQLDLALQLYKDMKGLSGRNPD 437

Query: 570 EPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQ 629
              Y +L+D  GKA    +A      ML  G++P + T ++L+  + + G+  +A     
Sbjct: 438 AITYTVLIDSLGKANRTVEAAALMSEMLDVGIKPTLQTYSALICGYAKAGKREEAEDTFS 497

Query: 630 GMLNLGLKPSLQTYTLLLSCCTEARSPYDMGFCHELMAVSGHPAHMFLLSMPSPGPDGQN 689
            ML  G KP    Y+++L               +  M   GH     L  +   G   +N
Sbjct: 498 CMLRSGTKPDNLAYSVMLDVLLRGNETRKAWGLYRDMISDGHTPSYTLYELMILGLMKEN 557

Query: 690 VRDHV 694
             D +
Sbjct: 558 RSDDI 562



 Score =  142 bits (357), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 86/289 (29%), Positives = 138/289 (47%), Gaps = 2/289 (0%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           R +G + D  TY T++    R        K+ + M    CQP++ TYN +I  YGR    
Sbjct: 289 RNSGLRPDAITYNTLLSACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMISVYGRCGLA 348

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
            EA  +F ++++ G  PD VTY +L+   A+    +   ++Y++MQ  G   D  TY+ I
Sbjct: 349 AEAERLFMELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTYNTI 408

Query: 472 INCLGKAGHLQAAHQLFCEMVN-QGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAG 530
           I+  GK G L  A QL+ +M    G  P+ +TY ++I    KA     A  L  +M + G
Sbjct: 409 IHMYGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRTVEAAALMSEMLDVG 468

Query: 531 FEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAW 590
            +P   TYS ++      G  +EAE  F+ M R    PD   Y +++D+  +    RKAW
Sbjct: 469 IKPTLQTYSALICGYAKAGKREEAEDTFSCMLRSGTKPDNLAYSVMLDVLLRGNETRKAW 528

Query: 591 EWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNL-GLKP 638
             Y  M+  G  P+      ++   ++  +  D    ++ M  L G+ P
Sbjct: 529 GLYRDMISDGHTPSYTLYELMILGLMKENRSDDIQKTIRDMEELCGMNP 577



 Score =  139 bits (351), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 82/308 (26%), Positives = 161/308 (52%), Gaps = 4/308 (1%)

Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLI 402
           AL  F WL  +     +      ++G+LGR  Q     ++  +         V  YN ++
Sbjct: 174 ALEVFEWLNLRHWHSPNARMVAAILGVLGRWNQESLAVEIFTR-AEPTVGDRVQVYNAMM 232

Query: 403 HSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFL--DVAMDMYKKMQAAG 460
             Y R+   ++A ++   M+  GC PD +++ TLI+   K+G L  ++A+++   ++ +G
Sbjct: 233 GVYSRSGKFSKAQELVDAMRQRGCVPDLISFNTLINARLKSGGLTPNLAVELLDMVRNSG 292

Query: 461 LSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSAL 520
           L PD  TY+ +++   +  +L  A ++F +M    C P+L TYN MI++  +      A 
Sbjct: 293 LRPDAITYNTLLSACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMISVYGRCGLAAEAE 352

Query: 521 KLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLW 580
           +L+ +++  GF PD VTY+ ++         ++ + V+ +M++  +  DE  Y  ++ ++
Sbjct: 353 RLFMELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTYNTIIHMY 412

Query: 581 GKAGNVRKAWEWYEAML-QAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPS 639
           GK G +  A + Y+ M   +G  P+  T   L+ +  +  +  +A  L+  ML++G+KP+
Sbjct: 413 GKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRTVEAAALMSEMLDVGIKPT 472

Query: 640 LQTYTLLL 647
           LQTY+ L+
Sbjct: 473 LQTYSALI 480



 Score =  117 bits (294), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 75/307 (24%), Positives = 146/307 (47%)

Query: 352  RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
            RQ+G   D  T+ +++    +   +     + + M+RDG  P V + N L+H+      L
Sbjct: 779  RQSGRTPDLKTWNSLMSAYAQCGCYERARAIFNTMMRDGPSPTVESINILLHALCVDGRL 838

Query: 412  NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
             E   V +++Q +G +  + +   ++D  A+AG +     +Y  M+AAG  P    Y ++
Sbjct: 839  EELYVVVEELQDMGFKISKSSILLMLDAFARAGNIFEVKKIYSSMKAAGYLPTIRLYRMM 898

Query: 472  INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF 531
            I  L K   ++ A  +  EM        L  +N M+ +     +Y+  +++Y+ ++  G 
Sbjct: 899  IELLCKGKRVRDAEIMVSEMEEANFKVELAIWNSMLKMYTAIEDYKKTVQVYQRIKETGL 958

Query: 532  EPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWE 591
            EPD+ TY+ ++ +       +E   +  +MR     P    Y  L+  +GK   + +A +
Sbjct: 959  EPDETTYNTLIIMYCRDRRPEEGYLLMQQMRNLGLDPKLDTYKSLISAFGKQKCLEQAEQ 1018

Query: 592  WYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCT 651
             +E +L  GL+ +    ++++      G  S A  LLQ M N G++P+L T  LL+   +
Sbjct: 1019 LFEELLSKGLKLDRSFYHTMMKISRDSGSDSKAEKLLQMMKNAGIEPTLATMHLLMVSYS 1078

Query: 652  EARSPYD 658
             + +P +
Sbjct: 1079 SSGNPQE 1085



 Score =  108 bits (269), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 73/296 (24%), Positives = 140/296 (47%), Gaps = 19/296 (6%)

Query: 390  GCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVA 449
             C P    Y  +I +YG+     +A  V   ++  G  PD  T+ +L+  +A+ G  + A
Sbjct: 750  ACSP---MYTDIIEAYGKQKLWQKAESVVGNLRQSGRTPDLKTWNSLMSAYAQCGCYERA 806

Query: 450  MDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIAL 509
              ++  M   G SP   + +++++ L   G L+  + +  E+ + G   +  +  +M+  
Sbjct: 807  RAIFNTMMRDGPSPTVESINILLHALCVDGRLEELYVVVEELQDMGFKISKSSILLMLDA 866

Query: 510  QAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPD 569
             A+A N     K+Y  M+ AG+ P    Y +++E+L     + +AE + +EM   N+  +
Sbjct: 867  FARAGNIFEVKKIYSSMKAAGYLPTIRLYRMMIELLCKGKRVRDAEIMVSEMEEANFKVE 926

Query: 570  EPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQ 629
              ++  ++ ++    + +K  + Y+ + + GL P+  T N+L+  + R  +  + Y L+Q
Sbjct: 927  LAIWNSMLKMYTAIEDYKKTVQVYQRIKETGLEPDETTYNTLIIMYCRDRRPEEGYLLMQ 986

Query: 630  GMLNLGLKPSLQTYTLLLS------CCTEARSPY----------DMGFCHELMAVS 669
             M NLGL P L TY  L+S      C  +A   +          D  F H +M +S
Sbjct: 987  QMRNLGLDPKLDTYKSLISAFGKQKCLEQAEQLFEELLSKGLKLDRSFYHTMMKIS 1042



 Score =  102 bits (255), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 103/497 (20%), Positives = 202/497 (40%), Gaps = 54/497 (10%)

Query: 352  RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
            + AG+      Y  M+ +L + ++      ++ +M     +  +  +N ++  Y      
Sbjct: 884  KAAGYLPTIRLYRMMIELLCKGKRVRDAEIMVSEMEEANFKVELAIWNSMLKMYTAIEDY 943

Query: 412  NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
             + + V+++++  G EPD  TY TLI ++ +    +    + ++M+  GL P   TY  +
Sbjct: 944  KKTVQVYQRIKETGLEPDETTYNTLIIMYCRDRRPEEGYLLMQQMRNLGLDPKLDTYKSL 1003

Query: 472  INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF 531
            I+  GK   L+ A QLF E++++G   +   Y+ M+ +   + +   A KL + M+NAG 
Sbjct: 1004 ISAFGKQKCLEQAEQLFEELLSKGLKLDRSFYHTMMKISRDSGSDSKAEKLLQMMKNAGI 1063

Query: 532  EPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWE 591
            EP   T  ++M      G   EAE V + ++          Y  ++D + ++ +     E
Sbjct: 1064 EPTLATMHLLMVSYSSSGNPQEAEKVLSNLKDTEVELTTLPYSSVIDAYLRSKDYNSGIE 1123

Query: 592  WYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCT 651
                M + GL P+    + + + F+R    S              K  ++   LL     
Sbjct: 1124 RLLEMKKEGLEPD----HRIWTCFVRAASFS--------------KEKIEVMLLL----- 1160

Query: 652  EARSPYDMGFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRESKRG 711
              ++  D+GF   +  ++G P  +                  V  + E + S +  +   
Sbjct: 1161 --KALEDIGFDLPIRLLAGRPELLV---------------SEVDGWFEKLKSIEDNAALN 1203

Query: 712  LVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAVKEKGMSYWLINLHVMSDGTAVIALS 771
             V+A+++ L    L+  A  V+++  ++ ++   V       W  +   +S G A+ A  
Sbjct: 1204 FVNALLNLLWAFELRATASWVFQLGIKRGIFSLDVFRVADKDWGADFRRLSGGAALDA-- 1261

Query: 772  RTLAWFRKQMLISGVGPSRIDIVTGWGRRSRVTGTSLVRQAVQELLHMFSFPFFTENGNS 831
             +L  + +        P  + ++TG    +   G SL +     L  M S PF      +
Sbjct: 1262 -SLEGYPE-------SPKSVVLITG---TAEYNGISLDKTLKACLWEMGS-PFLPCKTRT 1309

Query: 832  GCFVGCGEPLNKWLLQS 848
            G  V     L  WL  S
Sbjct: 1310 GLLVAKAHSLRMWLKDS 1326



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 74/345 (21%), Positives = 143/345 (41%), Gaps = 11/345 (3%)

Query: 369 ILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEP 428
           +L +   F    + L   + +G +    T   ++ SY  +   +EA ++ + ++      
Sbjct: 583 VLVKGECFDLAARQLKVAITNGYELENDTLLSILGSYSSSGRHSEAFELLEFLKEHASGS 642

Query: 429 DRVTYCTLIDIHAKAGFLDVAMDMYKK---MQAAGLSPDTFTYSVIINCLGKAGHLQAAH 485
            R+    LI +H K   L  A+D Y     +        T  Y  +++C     H   A 
Sbjct: 643 KRLITEALIVLHCKVNNLSAALDEYFADPCVHGWCFGSSTM-YETLLHCCVANEHYAEAS 701

Query: 486 QLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFE-PDKVTYSIVMEV 544
           Q+F ++   GC  +      M+ +  K    ++A ++    +  GF       Y+ ++E 
Sbjct: 702 QVFSDLRLSGCEASESVCKSMVVVYCKLGFPETAHQVVNQAETKGFHFACSPMYTDIIEA 761

Query: 545 LGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPN 604
            G      +AE+V   +R+    PD   +  L+  + + G   +A   +  M++ G  P 
Sbjct: 762 YGKQKLWQKAESVVGNLRQSGRTPDLKTWNSLMSAYAQCGCYERARAIFNTMMRDGPSPT 821

Query: 605 VPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGFCHE 664
           V + N LL A    G+L + Y +++ + ++G K S  +  L+L     A + +++   + 
Sbjct: 822 VESINILLHALCVDGRLEELYVVVEELQDMGFKISKSSILLMLDAFARAGNIFEVKKIYS 881

Query: 665 LMAVSGH-PAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRES 708
            M  +G+ P       M      G+ VRD      E+M SE  E+
Sbjct: 882 SMKAAGYLPTIRLYRMMIELLCKGKRVRDA-----EIMVSEMEEA 921


>gi|449463623|ref|XP_004149531.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g59040-like [Cucumis sativus]
          Length = 580

 Score =  161 bits (408), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 94/349 (26%), Positives = 172/349 (49%), Gaps = 6/349 (1%)

Query: 334 LKQLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQP 393
            KQL+   +      WLR Q+ +   E  +  ++   G+   F    K+L+ M + G  P
Sbjct: 112 FKQLKKWNLVSEILEWLRTQSWWNFSEMDFVMLITAYGKLGDFNRAEKVLNLMNKKGYAP 171

Query: 394 NVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMY 453
           NVV++  L+ +YGR    N A  +F++MQ  G EP  +TY  ++    +      A +++
Sbjct: 172 NVVSHTALMEAYGRGRRYNNAEAIFRRMQSGGPEPSALTYQIMLKTFVEGSKFKEAEELF 231

Query: 454 KKM---QAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQ 510
             +   +   L PD   + +II    KAG+ + A ++F EM  +G     VTYN +++ +
Sbjct: 232 DSLLNKEKPVLKPDQKMFHMIIYMFKKAGNYEKARKVFAEMAARGVPQTTVTYNSLMSFE 291

Query: 511 AKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDE 570
               NY+   K+Y  MQ AG +PD V+Y++++   G     +EA AVF EM      P  
Sbjct: 292 T---NYKEVSKIYDQMQRAGLQPDVVSYALLISAYGKARREEEALAVFEEMLDAGIRPTH 348

Query: 571 PVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQG 630
             Y +L+D +  +G V +A   +++M +    P++ +  ++LSA++    +  A +  + 
Sbjct: 349 KAYNILLDAFAISGMVEQAKIVFKSMKRDRCSPDICSYTTMLSAYVNASDMEGAENFFRR 408

Query: 631 MLNLGLKPSLQTYTLLLSCCTEARSPYDMGFCHELMAVSGHPAHMFLLS 679
           +   G +P++ TY  L+    +  +   M   +E M V+G   +  +L+
Sbjct: 409 LKQDGFRPNVVTYGTLIKGYAKINNLEKMIKRYEEMKVNGIRVNQTILT 457



 Score =  116 bits (290), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 68/273 (24%), Positives = 130/273 (47%), Gaps = 3/273 (1%)

Query: 356 FKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEAL 415
            K D+  +  ++ +  +A  +    K+  +M   G     VTYN L+      NY  E  
Sbjct: 242 LKPDQKMFHMIIYMFKKAGNYEKARKVFAEMAARGVPQTTVTYNSLMSF--ETNY-KEVS 298

Query: 416 DVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCL 475
            ++ QMQ  G +PD V+Y  LI  + KA   + A+ ++++M  AG+ P    Y+++++  
Sbjct: 299 KIYDQMQRAGLQPDVVSYALLISAYGKARREEEALAVFEEMLDAGIRPTHKAYNILLDAF 358

Query: 476 GKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDK 535
             +G ++ A  +F  M    C P++ +Y  M++    A + + A   +R ++  GF P+ 
Sbjct: 359 AISGMVEQAKIVFKSMKRDRCSPDICSYTTMLSAYVNASDMEGAENFFRRLKQDGFRPNV 418

Query: 536 VTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEA 595
           VTY  +++       L++    + EM+      ++ +   ++D +GK  +   A  W+  
Sbjct: 419 VTYGTLIKGYAKINNLEKMIKRYEEMKVNGIRVNQTILTTIMDAYGKNKDFGSAVIWFNE 478

Query: 596 MLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLL 628
           +   GLRP+    N LLS      +L +A  L+
Sbjct: 479 IESCGLRPDQKAKNILLSLAKTAEELDEANQLV 511



 Score = 89.0 bits (219), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 47/203 (23%), Positives = 101/203 (49%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           ++AG + D  +Y  ++   G+AR+      + ++M+  G +P    YN L+ ++  +  +
Sbjct: 305 QRAGLQPDVVSYALLISAYGKARREEEALAVFEEMLDAGIRPTHKAYNILLDAFAISGMV 364

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
            +A  VFK M+   C PD  +Y T++  +  A  ++ A + +++++  G  P+  TY  +
Sbjct: 365 EQAKIVFKSMKRDRCSPDICSYTTMLSAYVNASDMEGAENFFRRLKQDGFRPNVVTYGTL 424

Query: 472 INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF 531
           I    K  +L+   + + EM   G   N      ++    K +++ SA+  + ++++ G 
Sbjct: 425 IKGYAKINNLEKMIKRYEEMKVNGIRVNQTILTTIMDAYGKNKDFGSAVIWFNEIESCGL 484

Query: 532 EPDKVTYSIVMEVLGHCGYLDEA 554
            PD+   +I++ +      LDEA
Sbjct: 485 RPDQKAKNILLSLAKTAEELDEA 507



 Score = 67.4 bits (163), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 41/169 (24%), Positives = 79/169 (46%)

Query: 354 AGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNE 413
           AG +     Y  ++     +        +   M RD C P++ +Y  ++ +Y  A+ +  
Sbjct: 342 AGIRPTHKAYNILLDAFAISGMVEQAKIVFKSMKRDRCSPDICSYTTMLSAYVNASDMEG 401

Query: 414 ALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIIN 473
           A + F++++  G  P+ VTY TLI  +AK   L+  +  Y++M+  G+  +    + I++
Sbjct: 402 AENFFRRLKQDGFRPNVVTYGTLIKGYAKINNLEKMIKRYEEMKVNGIRVNQTILTTIMD 461

Query: 474 CLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKL 522
             GK     +A   F E+ + G  P+    NI+++L   A     A +L
Sbjct: 462 AYGKNKDFGSAVIWFNEIESCGLRPDQKAKNILLSLAKTAEELDEANQL 510


>gi|449529622|ref|XP_004171797.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Cucumis sativus]
          Length = 618

 Score =  161 bits (408), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 100/304 (32%), Positives = 153/304 (50%), Gaps = 8/304 (2%)

Query: 350 LRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRAN 409
           LRR  G+  +  TYTT++  L    +     +L  +M + GC PN VTY  LI    +  
Sbjct: 153 LRR--GYIPNVVTYTTLIKGLCMEHRISEATRLFLRMQKLGCTPNAVTYGTLIKGLCQTG 210

Query: 410 YLNEALDVFKQM------QVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSP 463
            +N AL + K+M        V C+P  +TY  +ID   K G  D A +++++M+A G+ P
Sbjct: 211 NVNIALKLHKEMLNDASQYGVNCKPGVITYSIIIDGLCKVGREDEAKELFEEMKAQGMIP 270

Query: 464 DTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLY 523
           D  +YS +I+    AG    +  LF EMV+QG  P++VT++++I    K      A KL 
Sbjct: 271 DVISYSTLIHGFCCAGKWDQSKHLFDEMVDQGVQPDMVTFSVLIDTLCKEGKVTEAKKLL 330

Query: 524 RDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKA 583
             M   G  P+ +TY+ +++     G L+ A  +F  M  K   PDE  Y  L++ + K 
Sbjct: 331 EVMIQRGIVPNLITYNSLIDGFCMVGDLNSARELFLSMPSKGLEPDEISYTTLINGYCKT 390

Query: 584 GNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTY 643
             V++A   Y  MLQ G  PNV T  +LL    + G++ DA  L   M   G+  + Q Y
Sbjct: 391 WKVKEAMNLYNEMLQVGKSPNVTTYGTLLKGLFQKGKVGDAKKLFGVMKTYGVSANSQIY 450

Query: 644 TLLL 647
            + L
Sbjct: 451 GIFL 454



 Score =  147 bits (370), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 92/302 (30%), Positives = 152/302 (50%), Gaps = 1/302 (0%)

Query: 346 FFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSY 405
            F  ++ Q G   D  +Y+T++     A ++     L D+MV  G QP++VT++ LI + 
Sbjct: 259 LFEEMKAQ-GMIPDVISYSTLIHGFCCAGKWDQSKHLFDEMVDQGVQPDMVTFSVLIDTL 317

Query: 406 GRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDT 465
            +   + EA  + + M   G  P+ +TY +LID     G L+ A +++  M + GL PD 
Sbjct: 318 CKEGKVTEAKKLLEVMIQRGIVPNLITYNSLIDGFCMVGDLNSARELFLSMPSKGLEPDE 377

Query: 466 FTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRD 525
            +Y+ +IN   K   ++ A  L+ EM+  G  PN+ TY  ++    +      A KL+  
Sbjct: 378 ISYTTLINGYCKTWKVKEAMNLYNEMLQVGKSPNVTTYGTLLKGLFQKGKVGDAKKLFGV 437

Query: 526 MQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGN 585
           M+  G   +   Y I ++ L     L EA  +F E++  N+  +   Y  L+D   KAG 
Sbjct: 438 MKTYGVSANSQIYGIFLDGLCKNDCLFEAMELFNELKSYNFKLNIENYSCLIDGLCKAGK 497

Query: 586 VRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTL 645
           +  AWE +E + Q GL+P+V T N ++  F +VGQ+ +A  L + M   G  P +  Y  
Sbjct: 498 LETAWELFEKLSQEGLQPDVVTYNIMIHGFCKVGQVDNANILFEKMEENGCTPDIIAYNT 557

Query: 646 LL 647
           LL
Sbjct: 558 LL 559



 Score =  140 bits (352), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 95/337 (28%), Positives = 162/337 (48%), Gaps = 8/337 (2%)

Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLI 402
           A  FF+ + R         ++  ++G L +   +  +  L ++M   G  P++ T + L 
Sbjct: 75  AFHFFDLMMRSHPIPPIS-SFNRLLGGLAKINHYSQLFSLYNEMRLAGLSPDLFTLSILA 133

Query: 403 HSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLS 462
           +     N ++EAL     +   G  P+ VTY TLI        +  A  ++ +MQ  G +
Sbjct: 134 NCLCNVNRVSEALAAMAGILRRGYIPNVVTYTTLIKGLCMEHRISEATRLFLRMQKLGCT 193

Query: 463 PDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQG------CIPNLVTYNIMIALQAKARNY 516
           P+  TY  +I  L + G++  A +L  EM+N        C P ++TY+I+I    K    
Sbjct: 194 PNAVTYGTLIKGLCQTGNVNIALKLHKEMLNDASQYGVNCKPGVITYSIIIDGLCKVGRE 253

Query: 517 QSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLL 576
             A +L+ +M+  G  PD ++YS ++      G  D+++ +F EM  +   PD   + +L
Sbjct: 254 DEAKELFEEMKAQGMIPDVISYSTLIHGFCCAGKWDQSKHLFDEMVDQGVQPDMVTFSVL 313

Query: 577 VDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGL 636
           +D   K G V +A +  E M+Q G+ PN+ T NSL+  F  VG L+ A  L   M + GL
Sbjct: 314 IDTLCKEGKVTEAKKLLEVMIQRGIVPNLITYNSLIDGFCMVGDLNSARELFLSMPSKGL 373

Query: 637 KPSLQTYTLLLS-CCTEARSPYDMGFCHELMAVSGHP 672
           +P   +YT L++  C   +    M   +E++ V   P
Sbjct: 374 EPDEISYTTLINGYCKTWKVKEAMNLYNEMLQVGKSP 410



 Score =  137 bits (346), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 94/346 (27%), Positives = 163/346 (47%), Gaps = 27/346 (7%)

Query: 354 AGFKHDEHTYTTMVGILGRARQFGAINKL-----LDQMVRDGCQPNVVTYNRLIHSYGRA 408
           A F  +E ++   + +  R  + G I  +      D M+R    P + ++NRL+    + 
Sbjct: 45  AAFNREEISFHHPLSLFLRNCKTGNITAIQAFHFFDLMMRSHPIPPISSFNRLLGGLAKI 104

Query: 409 NYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTY 468
           N+ ++   ++ +M++ G  PD  T   L +       +  A+     +   G  P+  TY
Sbjct: 105 NHYSQLFSLYNEMRLAGLSPDLFTLSILANCLCNVNRVSEALAAMAGILRRGYIPNVVTY 164

Query: 469 SVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQN 528
           + +I  L     +  A +LF  M   GC PN VTY  +I    +  N   ALKL+++M N
Sbjct: 165 TTLIKGLCMEHRISEATRLFLRMQKLGCTPNAVTYGTLIKGLCQTGNVNIALKLHKEMLN 224

Query: 529 ------AGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGK 582
                    +P  +TYSI+++ L   G  DEA+ +F EM+ +  +PD   Y  L+  +  
Sbjct: 225 DASQYGVNCKPGVITYSIIIDGLCKVGREDEAKELFEEMKAQGMIPDVISYSTLIHGFCC 284

Query: 583 AGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQT 642
           AG   ++   ++ M+  G++P++ T + L+    + G++++A  LL+ M+  G+ P+L T
Sbjct: 285 AGKWDQSKHLFDEMVDQGVQPDMVTFSVLIDTLCKEGKVTEAKKLLEVMIQRGIVPNLIT 344

Query: 643 YTLLLSCCTEARSPYDMGFCHELMAVSGHPAHMFLLSMPSPG--PD 686
           Y  L+            GFC   M    + A    LSMPS G  PD
Sbjct: 345 YNSLID-----------GFC---MVGDLNSARELFLSMPSKGLEPD 376



 Score =  135 bits (341), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 81/293 (27%), Positives = 147/293 (50%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           G + D  T++ ++  L +  +     KLL+ M++ G  PN++TYN LI  +     LN A
Sbjct: 302 GVQPDMVTFSVLIDTLCKEGKVTEAKKLLEVMIQRGIVPNLITYNSLIDGFCMVGDLNSA 361

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
            ++F  M   G EPD ++Y TLI+ + K   +  AM++Y +M   G SP+  TY  ++  
Sbjct: 362 RELFLSMPSKGLEPDEISYTTLINGYCKTWKVKEAMNLYNEMLQVGKSPNVTTYGTLLKG 421

Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPD 534
           L + G +  A +LF  M   G   N   Y I +    K      A++L+ ++++  F+ +
Sbjct: 422 LFQKGKVGDAKKLFGVMKTYGVSANSQIYGIFLDGLCKNDCLFEAMELFNELKSYNFKLN 481

Query: 535 KVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYE 594
              YS +++ L   G L+ A  +F ++ ++   PD   Y +++  + K G V  A   +E
Sbjct: 482 IENYSCLIDGLCKAGKLETAWELFEKLSQEGLQPDVVTYNIMIHGFCKVGQVDNANILFE 541

Query: 595 AMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
            M + G  P++   N+LL  F    +L +   LL  M+   + P+  + T+++
Sbjct: 542 KMEENGCTPDIIAYNTLLCGFCEGNKLEEVIKLLHKMVQKDVSPNAASCTIVV 594



 Score = 98.2 bits (243), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 64/239 (26%), Positives = 117/239 (48%), Gaps = 10/239 (4%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           G + DE +YTT++    +  +      L ++M++ G  PNV TY  L+    +   + +A
Sbjct: 372 GLEPDEISYTTLINGYCKTWKVKEAMNLYNEMLQVGKSPNVTTYGTLLKGLFQKGKVGDA 431

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
             +F  M+  G   +   Y   +D   K   L  AM+++ ++++     +   YS +I+ 
Sbjct: 432 KKLFGVMKTYGVSANSQIYGIFLDGLCKNDCLFEAMELFNELKSYNFKLNIENYSCLIDG 491

Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPD 534
           L KAG L+ A +LF ++  +G  P++VTYNIMI    K     +A  L+  M+  G  PD
Sbjct: 492 LCKAGKLETAWELFEKLSQEGLQPDVVTYNIMIHGFCKVGQVDNANILFEKMEENGCTPD 551

Query: 535 KVTYSIVMEVLGHCGY-----LDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRK 588
            + Y+ ++     CG+     L+E   +  +M +K+  P+     ++VD+  K    +K
Sbjct: 552 IIAYNTLL-----CGFCEGNKLEEVIKLLHKMVQKDVSPNAASCTIVVDMLCKDEKYKK 605



 Score = 91.3 bits (225), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 58/222 (26%), Positives = 106/222 (47%), Gaps = 5/222 (2%)

Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLI 402
           A+  +N +  Q G   +  TY T++  L +  + G   KL   M   G   N   Y   +
Sbjct: 396 AMNLYNEML-QVGKSPNVTTYGTLLKGLFQKGKVGDAKKLFGVMKTYGVSANSQIYGIFL 454

Query: 403 HSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLS 462
               + + L EA+++F +++    + +   Y  LID   KAG L+ A ++++K+   GL 
Sbjct: 455 DGLCKNDCLFEAMELFNELKSYNFKLNIENYSCLIDGLCKAGKLETAWELFEKLSQEGLQ 514

Query: 463 PDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKL 522
           PD  TY+++I+   K G +  A+ LF +M   GC P+++ YN ++    +    +  +KL
Sbjct: 515 PDVVTYNIMIHGFCKVGQVDNANILFEKMEENGCTPDIIAYNTLLCGFCEGNKLEEVIKL 574

Query: 523 YRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRK 564
              M      P+  + +IV+++L      DE    F ++  K
Sbjct: 575 LHKMVQKDVSPNAASCTIVVDMLCK----DEKYKKFVDLLPK 612


>gi|449463386|ref|XP_004149415.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Cucumis sativus]
          Length = 830

 Score =  161 bits (408), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 94/295 (31%), Positives = 155/295 (52%)

Query: 354 AGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNE 413
           +G +    T+ TM+ IL +  +      ++  + R    PN  TY  LI  + R + L+ 
Sbjct: 196 SGIRPSLLTFNTMINILCKKGRVQEAKLIMSHIFRYDAYPNAFTYTSLILGHCRNHNLDL 255

Query: 414 ALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIIN 473
           A  +F +M   GC+P+ VTY TLI+     G L+ AMDM ++M   G+ P  +TY++ + 
Sbjct: 256 AFAMFDRMVKDGCDPNSVTYSTLINGLCSEGRLEEAMDMLEEMVQKGIEPTVYTYTIPLV 315

Query: 474 CLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEP 533
            L  AG    A +L  +M  +GC+PN+ T+  +I+  ++   ++ A+ LY  M   G  P
Sbjct: 316 SLCDAGCSSEAVELLGKMKKRGCVPNIQTFTALISGLSRDGKFEIAIGLYHKMLADGLVP 375

Query: 534 DKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWY 593
             VTY+ ++  L   G  + A  +F  M     +P    Y  ++  +   G+++KA   +
Sbjct: 376 TTVTYNALINQLCVEGRFETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIF 435

Query: 594 EAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
           + ML+AG  PNV T N+L+  + + G L++A  LL+ M   GLKP   TYT L+S
Sbjct: 436 DKMLKAGSSPNVITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELIS 490



 Score =  145 bits (365), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 91/298 (30%), Positives = 151/298 (50%), Gaps = 8/298 (2%)

Query: 356 FKHDEH----TYTTMVGILGRARQ--FGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRAN 409
           F++D +    TYT++  ILG  R         + D+MV+DGC PN VTY+ LI+      
Sbjct: 229 FRYDAYPNAFTYTSL--ILGHCRNHNLDLAFAMFDRMVKDGCDPNSVTYSTLINGLCSEG 286

Query: 410 YLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYS 469
            L EA+D+ ++M   G EP   TY   +     AG    A+++  KM+  G  P+  T++
Sbjct: 287 RLEEAMDMLEEMVQKGIEPTVYTYTIPLVSLCDAGCSSEAVELLGKMKKRGCVPNIQTFT 346

Query: 470 VIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNA 529
            +I+ L + G  + A  L+ +M+  G +P  VTYN +I        +++A  +++ M + 
Sbjct: 347 ALISGLSRDGKFEIAIGLYHKMLADGLVPTTVTYNALINQLCVEGRFETAFTIFKWMLSH 406

Query: 530 GFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKA 589
           G  P   TY+ +++     G + +A  +F +M +    P+   Y  L+  + K GN+  A
Sbjct: 407 GSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKMLKAGSSPNVITYNTLIYGYCKQGNLNNA 466

Query: 590 WEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
               E M   GL+P+  T   L+S F R G+L  A  L  GM+  G+ P+  TYT ++
Sbjct: 467 MRLLEIMKGNGLKPDAWTYTELISGFSRGGKLEHATSLFYGMMEHGISPNHVTYTAII 524



 Score =  143 bits (361), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 95/335 (28%), Positives = 171/335 (51%), Gaps = 12/335 (3%)

Query: 323 YSMDAY-----QANQVLKQLQDHTVALGFFNWLRR-QAGFKHDEHTYTTMV-GILGRARQ 375
           +  DAY       + +L   ++H + L F  + R  + G   +  TY+T++ G+    R 
Sbjct: 229 FRYDAYPNAFTYTSLILGHCRNHNLDLAFAMFDRMVKDGCDPNSVTYSTLINGLCSEGRL 288

Query: 376 FGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCT 435
             A++ +L++MV+ G +P V TY   + S   A   +EA+++  +M+  GC P+  T+  
Sbjct: 289 EEAMD-MLEEMVQKGIEPTVYTYTIPLVSLCDAGCSSEAVELLGKMKKRGCVPNIQTFTA 347

Query: 436 LIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQG 495
           LI   ++ G  ++A+ +Y KM A GL P T TY+ +IN L   G  + A  +F  M++ G
Sbjct: 348 LISGLSRDGKFEIAIGLYHKMLADGLVPTTVTYNALINQLCVEGRFETAFTIFKWMLSHG 407

Query: 496 CIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHC--GYLDE 553
            +P+  TYN +I       + Q A+ ++  M  AG  P+ +TY+ +  + G+C  G L+ 
Sbjct: 408 SLPSTQTYNEIIKCFCLMGDIQKAMVIFDKMLKAGSSPNVITYNTL--IYGYCKQGNLNN 465

Query: 554 AEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLS 613
           A  +   M+     PD   Y  L+  + + G +  A   +  M++ G+ PN  T  +++ 
Sbjct: 466 AMRLLEIMKGNGLKPDAWTYTELISGFSRGGKLEHATSLFYGMMEHGISPNHVTYTAIID 525

Query: 614 AFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
            +  + ++ DA  L   M+  G  PS QTY +++S
Sbjct: 526 GYFNLAKVDDALALFWKMVESGNLPSSQTYNVMIS 560



 Score =  140 bits (352), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 91/314 (28%), Positives = 148/314 (47%), Gaps = 1/314 (0%)

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
           Q G +   +TYT  +  L  A       +LL +M + GC PN+ T+  LI    R     
Sbjct: 300 QKGIEPTVYTYTIPLVSLCDAGCSSEAVELLGKMKKRGCVPNIQTFTALISGLSRDGKFE 359

Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
            A+ ++ +M   G  P  VTY  LI+     G  + A  ++K M + G  P T TY+ II
Sbjct: 360 IAIGLYHKMLADGLVPTTVTYNALINQLCVEGRFETAFTIFKWMLSHGSLPSTQTYNEII 419

Query: 473 NCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFE 532
            C    G +Q A  +F +M+  G  PN++TYN +I    K  N  +A++L   M+  G +
Sbjct: 420 KCFCLMGDIQKAMVIFDKMLKAGSSPNVITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLK 479

Query: 533 PDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEW 592
           PD  TY+ ++      G L+ A ++F  M      P+   Y  ++D +     V  A   
Sbjct: 480 PDAWTYTELISGFSRGGKLEHATSLFYGMMEHGISPNHVTYTAIIDGYFNLAKVDDALAL 539

Query: 593 YEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS-CCT 651
           +  M+++G  P+  T N ++S F +   +S+A +    M+  GL P++ TYT  +   C 
Sbjct: 540 FWKMVESGNLPSSQTYNVMISGFSKTNSISEAENFCGKMVKQGLLPNVITYTSFIDGLCR 599

Query: 652 EARSPYDMGFCHEL 665
             R+       HE+
Sbjct: 600 NGRTGLAFKIFHEM 613



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 115/427 (26%), Positives = 187/427 (43%), Gaps = 42/427 (9%)

Query: 362 TYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQM 421
           TY  ++  L    +F     +   M+  G  P+  TYN +I  +     + +A+ +F +M
Sbjct: 379 TYNALINQLCVEGRFETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKM 438

Query: 422 QVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHL 481
              G  P+ +TY TLI  + K G L+ AM + + M+  GL PD +TY+ +I+   + G L
Sbjct: 439 LKAGSSPNVITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGFSRGGKL 498

Query: 482 QAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIV 541
           + A  LF  M+  G  PN VTY  +I           AL L+  M  +G  P   TY+++
Sbjct: 499 EHATSLFYGMMEHGISPNHVTYTAIIDGYFNLAKVDDALALFWKMVESGNLPSSQTYNVM 558

Query: 542 MEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGL 601
           +        + EAE    +M ++  +P+   Y   +D   + G    A++ +  M +   
Sbjct: 559 ISGFSKTNSISEAENFCGKMVKQGLLPNVITYTSFIDGLCRNGRTGLAFKIFHEMEKRNY 618

Query: 602 RPNVPTCNSLLSAFLRVGQLSDA--YHLLQGMLNLGLKPSLQTYTLLLS-CCTEARSPYD 658
            PN+ T +SL+    + G+  DA  Y+LL  + + G +P++ TYT L+   C E R    
Sbjct: 619 FPNLYTYSSLIYGLCQEGRAEDAEMYNLLARLTHYGCEPNVDTYTTLVKGLCGEGR---- 674

Query: 659 MGFCHELMAVSGHPAHMFLLSMPSPGPD-----------GQNVRDHVGSFLEMMHSEDRE 707
              C+E        A   ++SM   G             G+     V S L + +S D  
Sbjct: 675 ---CYE--------ADQLVVSMQKKGLQPSEEIYRALLIGECKNLKVESALNIFYSMDTL 723

Query: 708 S-KRGLVD--AVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAV----------KEKGMSYW 754
             +  L D  A++  L K    EEA  +++   +K+   D V          KE      
Sbjct: 724 GFQLHLSDYKALICALCKENFIEEAQCIFQTMLEKHWNSDEVVWTVLLDGLLKEGETDLC 783

Query: 755 LINLHVM 761
           L  LHVM
Sbjct: 784 LKLLHVM 790



 Score =  129 bits (324), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 85/296 (28%), Positives = 138/296 (46%), Gaps = 1/296 (0%)

Query: 361 HTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQ 420
            T+T ++  L R  +F     L  +M+ DG  P  VTYN LI+          A  +FK 
Sbjct: 343 QTFTALISGLSRDGKFEIAIGLYHKMLADGLVPTTVTYNALINQLCVEGRFETAFTIFKW 402

Query: 421 MQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGH 480
           M   G  P   TY  +I      G +  AM ++ KM  AG SP+  TY+ +I    K G+
Sbjct: 403 MLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKMLKAGSSPNVITYNTLIYGYCKQGN 462

Query: 481 LQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSI 540
           L  A +L   M   G  P+  TY  +I+  ++    + A  L+  M   G  P+ VTY+ 
Sbjct: 463 LNNAMRLLEIMKGNGLKPDAWTYTELISGFSRGGKLEHATSLFYGMMEHGISPNHVTYTA 522

Query: 541 VMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAG 600
           +++   +   +D+A A+F +M     +P    Y +++  + K  ++ +A  +   M++ G
Sbjct: 523 IIDGYFNLAKVDDALALFWKMVESGNLPSSQTYNVMISGFSKTNSISEAENFCGKMVKQG 582

Query: 601 LRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTY-TLLLSCCTEARS 655
           L PNV T  S +    R G+   A+ +   M      P+L TY +L+   C E R+
Sbjct: 583 LLPNVITYTSFIDGLCRNGRTGLAFKIFHEMEKRNYFPNLYTYSSLIYGLCQEGRA 638



 Score = 99.8 bits (247), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 80/295 (27%), Positives = 132/295 (44%), Gaps = 2/295 (0%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           G K D  TYT ++    R  +      L   M+  G  PN VTY  +I  Y     +++A
Sbjct: 477 GLKPDAWTYTELISGFSRGGKLEHATSLFYGMMEHGISPNHVTYTAIIDGYFNLAKVDDA 536

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
           L +F +M   G  P   TY  +I   +K   +  A +   KM   GL P+  TY+  I+ 
Sbjct: 537 LALFWKMVESGNLPSSQTYNVMISGFSKTNSISEAENFCGKMVKQGLLPNVITYTSFIDG 596

Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMI-ALQAKARNYQSAL-KLYRDMQNAGFE 532
           L + G    A ++F EM  +   PNL TY+ +I  L  + R   + +  L   + + G E
Sbjct: 597 LCRNGRTGLAFKIFHEMEKRNYFPNLYTYSSLIYGLCQEGRAEDAEMYNLLARLTHYGCE 656

Query: 533 PDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEW 592
           P+  TY+ +++ L   G   EA+ +   M++K   P E +Y  L+    K   V  A   
Sbjct: 657 PNVDTYTTLVKGLCGEGRCYEADQLVVSMQKKGLQPSEEIYRALLIGECKNLKVESALNI 716

Query: 593 YEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
           + +M   G + ++    +L+ A  +   + +A  + Q ML          +T+LL
Sbjct: 717 FYSMDTLGFQLHLSDYKALICALCKENFIEEAQCIFQTMLEKHWNSDEVVWTVLL 771



 Score = 94.0 bits (232), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 65/245 (26%), Positives = 106/245 (43%), Gaps = 5/245 (2%)

Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLI 402
           AL  F W   ++G      TY  M+    +            +MV+ G  PNV+TY   I
Sbjct: 536 ALALF-WKMVESGNLPSSQTYNVMISGFSKTNSISEAENFCGKMVKQGLLPNVITYTSFI 594

Query: 403 HSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYK---KMQAA 459
               R      A  +F +M+     P+  TY +LI    + G  + A +MY    ++   
Sbjct: 595 DGLCRNGRTGLAFKIFHEMEKRNYFPNLYTYSSLIYGLCQEGRAEDA-EMYNLLARLTHY 653

Query: 460 GLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSA 519
           G  P+  TY+ ++  L   G    A QL   M  +G  P+   Y  ++  + K    +SA
Sbjct: 654 GCEPNVDTYTTLVKGLCGEGRCYEADQLVVSMQKKGLQPSEEIYRALLIGECKNLKVESA 713

Query: 520 LKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDL 579
           L ++  M   GF+     Y  ++  L    +++EA+ +F  M  K+W  DE V+ +L+D 
Sbjct: 714 LNIFYSMDTLGFQLHLSDYKALICALCKENFIEEAQCIFQTMLEKHWNSDEVVWTVLLDG 773

Query: 580 WGKAG 584
             K G
Sbjct: 774 LLKEG 778



 Score = 65.9 bits (159), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 38/152 (25%), Positives = 80/152 (52%), Gaps = 1/152 (0%)

Query: 500 LVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFA 559
           L ++  ++    K      A  +Y  M N+G  P  +T++ ++ +L   G + EA+ + +
Sbjct: 167 LCSFTTLLIQLGKFDMVDLARDMYIKMLNSGIRPSLLTFNTMINILCKKGRVQEAKLIMS 226

Query: 560 EMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVG 619
            + R +  P+   Y  L+    +  N+  A+  ++ M++ G  PN  T ++L++     G
Sbjct: 227 HIFRYDAYPNAFTYTSLILGHCRNHNLDLAFAMFDRMVKDGCDPNSVTYSTLINGLCSEG 286

Query: 620 QLSDAYHLLQGMLNLGLKPSLQTYTL-LLSCC 650
           +L +A  +L+ M+  G++P++ TYT+ L+S C
Sbjct: 287 RLEEAMDMLEEMVQKGIEPTVYTYTIPLVSLC 318



 Score = 50.1 bits (118), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 47/203 (23%), Positives = 87/203 (42%), Gaps = 5/203 (2%)

Query: 342 VALGFFNWLRRQAGFKHDEHTYTTMVGIL---GRARQFGAINKLLDQMVRDGCQPNVVTY 398
           +A   F+ + ++  F  + +TY++++  L   GRA      N LL ++   GC+PNV TY
Sbjct: 605 LAFKIFHEMEKRNYFP-NLYTYSSLIYGLCQEGRAEDAEMYN-LLARLTHYGCEPNVDTY 662

Query: 399 NRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQA 458
             L+          EA  +   MQ  G +P    Y  L+    K   ++ A++++  M  
Sbjct: 663 TTLVKGLCGEGRCYEADQLVVSMQKKGLQPSEEIYRALLIGECKNLKVESALNIFYSMDT 722

Query: 459 AGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQS 518
            G       Y  +I  L K   ++ A  +F  M+ +    + V + +++    K      
Sbjct: 723 LGFQLHLSDYKALICALCKENFIEEAQCIFQTMLEKHWNSDEVVWTVLLDGLLKEGETDL 782

Query: 519 ALKLYRDMQNAGFEPDKVTYSIV 541
            LKL   M++     +  TY ++
Sbjct: 783 CLKLLHVMESRNCTLNFQTYVML 805


>gi|359497434|ref|XP_003635514.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
           mitochondrial-like [Vitis vinifera]
          Length = 347

 Score =  161 bits (408), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 87/273 (31%), Positives = 145/273 (53%), Gaps = 1/273 (0%)

Query: 384 DQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKA 443
           + M+  GC P++ TYN LI    +  YL  A ++  +MQ+ GCEP+ +TY  LID   K 
Sbjct: 3   ESMLSVGCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKE 62

Query: 444 GFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTY 503
           G L+ A ++  +M   GL+ +   Y+ +I+ L K   +Q A  +F +M ++GC P++ T+
Sbjct: 63  GRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTF 122

Query: 504 NIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRR 563
           N +I    K   ++ AL LY+DM   G   + +TY+ ++      G + EA  +  +M  
Sbjct: 123 NSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLF 182

Query: 564 KNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSD 623
           +    D+  Y  L+    +AGN+ K    +E M+  GL PN  +CN L++   R G +  
Sbjct: 183 RGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQH 242

Query: 624 AYHLLQGMLNLGLKPSLQTYTLLLS-CCTEARS 655
           A   L+ M++ GL P + TY  L++  C   R+
Sbjct: 243 ALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRA 275



 Score =  146 bits (369), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 89/295 (30%), Positives = 150/295 (50%)

Query: 354 AGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNE 413
            G   D  TY T++  L +     +  +L+++M   GC+PNV+TY  LI  + +   L E
Sbjct: 8   VGCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEE 67

Query: 414 ALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIIN 473
           A +V  +M   G   + V Y  LI    K   +  A++M+  M + G  PD FT++ +I 
Sbjct: 68  ARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIF 127

Query: 474 CLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEP 533
            L K    + A  L+ +M+ +G I N +TYN +I    +    Q ALKL  DM   G   
Sbjct: 128 GLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPL 187

Query: 534 DKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWY 593
           D +TY+ +++ L   G +++  A+F +M  K   P+     +L++   + GN++ A E+ 
Sbjct: 188 DDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHALEFL 247

Query: 594 EAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
             M+  GL P++ T NSL++   + G+  +A +L   +   G+ P   TY  L+S
Sbjct: 248 RDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEGICPDAITYNTLIS 302



 Score =  132 bits (333), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 80/287 (27%), Positives = 145/287 (50%)

Query: 362 TYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQM 421
           TYT ++    +  +      +LD+M   G   N V YN LI +  +   + +AL++F  M
Sbjct: 51  TYTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDM 110

Query: 422 QVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHL 481
              GC+PD  T+ +LI    K    + A+ +Y+ M   G+  +T TY+ +I+   + G +
Sbjct: 111 SSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAM 170

Query: 482 QAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIV 541
           Q A +L  +M+ +GC  + +TYN +I    +A N +  L L+ DM + G  P+ ++ +I+
Sbjct: 171 QEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNIL 230

Query: 542 MEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGL 601
           +  L   G +  A     +M  +   PD   Y  L++   K G  ++A   ++ +   G+
Sbjct: 231 INGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEGI 290

Query: 602 RPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
            P+  T N+L+S   + G   DA+ LL   ++ G  P+  T+ +L+S
Sbjct: 291 CPDAITYNTLISWHCKEGMFDDAHLLLSRGVDSGFIPNEVTWYILVS 337



 Score =  127 bits (319), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 86/300 (28%), Positives = 152/300 (50%), Gaps = 13/300 (4%)

Query: 296 NVVESVSRILRQWKWGPLAE-----EALGNTNYSMDAYQANQVLKQL-QDHTV--ALGFF 347
           NV+     I R  K G L E     + +     +++A   N ++  L +D  V  AL  F
Sbjct: 48  NVITYTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMF 107

Query: 348 NWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGR 407
             +  + G K D  T+ +++  L +  +F     L   M+ +G   N +TYN LIH++ R
Sbjct: 108 GDMSSK-GCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLR 166

Query: 408 ANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFT 467
              + EAL +   M   GC  D +TY  LI    +AG ++  + +++ M + GL+P+  +
Sbjct: 167 RGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNIS 226

Query: 468 YSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQ 527
            +++IN L + G++Q A +   +M+++G  P++VTYN +I    K    Q AL L+  +Q
Sbjct: 227 CNILINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQ 286

Query: 528 NAGFEPDKVTYSIVMEVLGHC--GYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGN 585
             G  PD +TY+ ++    HC  G  D+A  + +      ++P+E  + +LV  + K G+
Sbjct: 287 VEGICPDAITYNTLIS--WHCKEGMFDDAHLLLSRGVDSGFIPNEVTWYILVSNFIKEGD 344



 Score =  118 bits (296), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 74/257 (28%), Positives = 124/257 (48%)

Query: 363 YTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQ 422
           Y  ++  L +  +      +   M   GC+P++ T+N LI    + N   EAL +++ M 
Sbjct: 87  YNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDML 146

Query: 423 VVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQ 482
           + G   + +TY TLI    + G +  A+ +   M   G   D  TY+ +I  L +AG+++
Sbjct: 147 LEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIE 206

Query: 483 AAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVM 542
               LF +M+++G  PN ++ NI+I    +  N Q AL+  RDM + G  PD VTY+ ++
Sbjct: 207 KGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLI 266

Query: 543 EVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLR 602
             L   G   EA  +F +++ +   PD   Y  L+    K G    A       + +G  
Sbjct: 267 NGLCKTGRAQEALNLFDKLQVEGICPDAITYNTLISWHCKEGMFDDAHLLLSRGVDSGFI 326

Query: 603 PNVPTCNSLLSAFLRVG 619
           PN  T   L+S F++ G
Sbjct: 327 PNEVTWYILVSNFIKEG 343



 Score =  108 bits (269), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 81/310 (26%), Positives = 142/310 (45%), Gaps = 14/310 (4%)

Query: 452 MYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQA 511
           M++ M + G  PD FTY+ +I  L K G+L +A +L  EM  +GC PN++TY I+I    
Sbjct: 1   MHESMLSVGCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFC 60

Query: 512 KARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEP 571
           K    + A  +  +M   G   + V Y+ ++  L     + +A  +F +M  K   PD  
Sbjct: 61  KEGRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIF 120

Query: 572 VYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGM 631
            +  L+    K     +A   Y+ ML  G+  N  T N+L+ AFLR G + +A  L+  M
Sbjct: 121 TFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDM 180

Query: 632 LNLGLKPSLQTYT-LLLSCCTEARSPYDMGFCHELMAVSGHPAHMFLLSMPSPGPDGQNV 690
           L  G      TY  L+ + C        +    ++M+   +P ++    + +      N+
Sbjct: 181 LFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNI 240

Query: 691 RDHVGSFLEMMHSEDRESKRGLVDAVVDF------LHKSGLKEEAGSVWEVAAQKNVYPD 744
           +  +    +M+H       RGL   +V +      L K+G  +EA ++++    + + PD
Sbjct: 241 QHALEFLRDMIH-------RGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEGICPD 293

Query: 745 AVKEKGMSYW 754
           A+    +  W
Sbjct: 294 AITYNTLISW 303


>gi|302756343|ref|XP_002961595.1| hypothetical protein SELMODRAFT_76510 [Selaginella moellendorffii]
 gi|300170254|gb|EFJ36855.1| hypothetical protein SELMODRAFT_76510 [Selaginella moellendorffii]
          Length = 603

 Score =  161 bits (408), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 104/325 (32%), Positives = 169/325 (52%), Gaps = 2/325 (0%)

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
           + G   D  TY T++  L ++ +      L ++M R GC PN  ++N +I    + + ++
Sbjct: 108 EDGHVPDVVTYNTVMDGLCKSGRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKID 167

Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
           +A  VF +M+     PD  +Y  LID  AKAG L+ A  ++++M  +G++P   TY+V+I
Sbjct: 168 QACQVFHEMEARDIPPDSWSYGILIDGLAKAGKLNEAYKLFRRMLDSGITPSAVTYNVVI 227

Query: 473 NCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFE 532
           + +  A  L  A +LF  M ++GC P+  T+NI+I    K      A +L + M + G  
Sbjct: 228 HGMCLAYTLDEALELFKSMRSKGCRPSRFTFNILIDAHCKRGKMDEAFRLLKRMTDDGHV 287

Query: 533 PDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEW 592
           PD VTYS ++  L     +D+A  +  +M ++   P       L+    KAG +++A E 
Sbjct: 288 PDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREV 347

Query: 593 YEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS-CCT 651
            +AM+ +G  P+V T N+L+    R GQ   A  LL  M+  GL P++ TYT L+S  C 
Sbjct: 348 LDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCK 407

Query: 652 EARSPYDMGFCHELMAVSGHPAHMF 676
             R P   G   + M  SG   ++F
Sbjct: 408 ANRLPEACGVFAQ-MKSSGCAPNLF 431



 Score =  158 bits (400), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 92/297 (30%), Positives = 151/297 (50%), Gaps = 1/297 (0%)

Query: 359 DEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVF 418
           D  +Y  ++  L +A +      L  +++  G  P+ V Y  LIH    AN  ++A ++F
Sbjct: 9   DSWSYGILIDGLAKAGKLNDARDLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDARELF 68

Query: 419 KQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKA 478
             M   GC P  VTY  +ID   K G L+ A D+ KKM   G  PD  TY+ +++ L K+
Sbjct: 69  ADMNRRGCPPSPVTYNVIIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKS 128

Query: 479 GHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTY 538
           G ++ A  LF EM   GC PN  ++N +I    +      A +++ +M+     PD  +Y
Sbjct: 129 GRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEARDIPPDSWSY 188

Query: 539 SIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQ 598
            I+++ L   G L+EA  +F  M      P    Y +++     A  + +A E +++M  
Sbjct: 189 GILIDGLAKAGKLNEAYKLFRRMLDSGITPSAVTYNVVIHGMCLAYTLDEALELFKSMRS 248

Query: 599 AGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS-CCTEAR 654
            G RP+  T N L+ A  + G++ +A+ LL+ M + G  P + TY+ L+S  C+ AR
Sbjct: 249 KGCRPSRFTFNILIDAHCKRGKMDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIAR 305



 Score =  155 bits (391), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 99/300 (33%), Positives = 146/300 (48%), Gaps = 5/300 (1%)

Query: 359 DEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVF 418
           D  +Y  ++  L +A +     KL  +M+  G  P+ VTYN +IH    A  L+EAL++F
Sbjct: 184 DSWSYGILIDGLAKAGKLNEAYKLFRRMLDSGITPSAVTYNVVIHGMCLAYTLDEALELF 243

Query: 419 KQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKA 478
           K M+  GC P R T+  LID H K G +D A  + K+M   G  PD  TYS +I+ L   
Sbjct: 244 KSMRSKGCRPSRFTFNILIDAHCKRGKMDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSI 303

Query: 479 GHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTY 538
             +  A  L  +MV + C P +VT N +I    KA   + A ++   M ++G  PD VTY
Sbjct: 304 ARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTY 363

Query: 539 SIVMEVLGHC--GYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAM 596
           + +  V GHC  G  + A  + ++M  +   P+   Y  LV    KA  + +A   +  M
Sbjct: 364 NTL--VHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQM 421

Query: 597 LQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTY-TLLLSCCTEARS 655
             +G  PN+ T  +L+  F   GQ+     L   M+  G+ P    Y TL    C   RS
Sbjct: 422 KSSGCAPNLFTYTALILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTLAAELCKSGRS 481



 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 96/293 (32%), Positives = 155/293 (52%), Gaps = 1/293 (0%)

Query: 363 YTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQ 422
           YT+++  L  A  F    +L   M R GC P+ VTYN +I +  +   L EA D+ K+M 
Sbjct: 48  YTSLIHGLCMANSFDDARELFADMNRRGCPPSPVTYNVIIDASCKRGMLEEACDLIKKMI 107

Query: 423 VVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQ 482
             G  PD VTY T++D   K+G ++ A+ ++ +M+  G +P+  +++ II  L +   + 
Sbjct: 108 EDGHVPDVVTYNTVMDGLCKSGRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKID 167

Query: 483 AAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVM 542
            A Q+F EM  +   P+  +Y I+I   AKA     A KL+R M ++G  P  VTY++V+
Sbjct: 168 QACQVFHEMEARDIPPDSWSYGILIDGLAKAGKLNEAYKLFRRMLDSGITPSAVTYNVVI 227

Query: 543 EVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLR 602
             +     LDEA  +F  MR K   P    + +L+D   K G + +A+   + M   G  
Sbjct: 228 HGMCLAYTLDEALELFKSMRSKGCRPSRFTFNILIDAHCKRGKMDEAFRLLKRMTDDGHV 287

Query: 603 PNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTY-TLLLSCCTEAR 654
           P+V T ++L+S    + ++ DA HLL+ M+    KP++ T  TL+   C   R
Sbjct: 288 PDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGR 340



 Score =  147 bits (371), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 96/294 (32%), Positives = 142/294 (48%), Gaps = 8/294 (2%)

Query: 347 FNWLRRQAGFKH--DEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHS 404
           F  L+R     H  D  TY+T++  L    +      LL+ MV+  C+P VVT N LIH 
Sbjct: 275 FRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHG 334

Query: 405 YGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPD 464
             +A  + EA +V   M   G  PD VTY TL+  H +AG  + A ++   M A GL+P+
Sbjct: 335 LCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAPN 394

Query: 465 TFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYR 524
             TY+ +++ L KA  L  A  +F +M + GC PNL TY  +I     A      LKL+ 
Sbjct: 395 VVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLFTYTALILGFCSAGQVDGGLKLFG 454

Query: 525 DMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAE----MRRKNWVPDEPVYGLLVDLW 580
           +M  AG  PD V Y  +   L   G    A  +  E    +R + W   + VY   VD  
Sbjct: 455 EMVCAGISPDHVVYGTLAAELCKSGRSARALEILREGRESLRSEAW--GDEVYRFAVDGL 512

Query: 581 GKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNL 634
             AG +  A  +   M++ G  P    C SL++   + GQ  +A  +L+ +++L
Sbjct: 513 LDAGKMEMALGFVRDMVRGGQLPAPERCASLVAGLCKSGQGGEARAVLEEIMDL 566



 Score =  140 bits (354), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 104/359 (28%), Positives = 172/359 (47%), Gaps = 10/359 (2%)

Query: 393 PNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDM 452
           P+  +Y  LI    +A  LN+A D+F+++   G  P  V Y +LI     A   D A ++
Sbjct: 8   PDSWSYGILIDGLAKAGKLNDARDLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDAREL 67

Query: 453 YKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAK 512
           +  M   G  P   TY+VII+   K G L+ A  L  +M+  G +P++VTYN ++    K
Sbjct: 68  FADMNRRGCPPSPVTYNVIIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCK 127

Query: 513 ARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHC--GYLDEAEAVFAEMRRKNWVPDE 570
           +   + AL L+ +M+  G  P++ +++ +  +LG C    +D+A  VF EM  ++  PD 
Sbjct: 128 SGRVEEALLLFNEMERLGCTPNRRSHNTI--ILGLCQQSKIDQACQVFHEMEARDIPPDS 185

Query: 571 PVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQG 630
             YG+L+D   KAG + +A++ +  ML +G+ P+  T N ++        L +A  L + 
Sbjct: 186 WSYGILIDGLAKAGKLNEAYKLFRRMLDSGITPSAVTYNVVIHGMCLAYTLDEALELFKS 245

Query: 631 MLNLGLKPSLQTYTLLLSCCTEARSPYDMGF-CHELMAVSGHPAHMFLLSMPSPGPDGQN 689
           M + G +PS  T+ +L+    + R   D  F   + M   GH   +   S    G     
Sbjct: 246 MRSKGCRPSRFTFNILIDAHCK-RGKMDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIA 304

Query: 690 VRDHVGSFLEMMHSEDRESKRGLV--DAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAV 746
             D     LE M    R+ K  +V  + ++  L K+G  +EA  V +        PD V
Sbjct: 305 RVDDARHLLEDMVK--RQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVV 361



 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 95/334 (28%), Positives = 154/334 (46%), Gaps = 2/334 (0%)

Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLI 402
           AL  FN + R     +     T ++G+  +++   A     +   RD   P+  +Y  LI
Sbjct: 134 ALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEARD-IPPDSWSYGILI 192

Query: 403 HSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLS 462
               +A  LNEA  +F++M   G  P  VTY  +I     A  LD A++++K M++ G  
Sbjct: 193 DGLAKAGKLNEAYKLFRRMLDSGITPSAVTYNVVIHGMCLAYTLDEALELFKSMRSKGCR 252

Query: 463 PDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKL 522
           P  FT++++I+   K G +  A +L   M + G +P++VTY+ +I+          A  L
Sbjct: 253 PSRFTFNILIDAHCKRGKMDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHL 312

Query: 523 YRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGK 582
             DM     +P  VT + ++  L   G + EA  V   M      PD   Y  LV    +
Sbjct: 313 LEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCR 372

Query: 583 AGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQT 642
           AG   +A E    M+  GL PNV T  +L+S   +  +L +A  +   M + G  P+L T
Sbjct: 373 AGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLFT 432

Query: 643 YT-LLLSCCTEARSPYDMGFCHELMAVSGHPAHM 675
           YT L+L  C+  +    +    E++     P H+
Sbjct: 433 YTALILGFCSAGQVDGGLKLFGEMVCAGISPDHV 466


>gi|334185431|ref|NP_188439.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|322510063|sp|Q5G1S8.2|PP241_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At3g18110, chloroplastic; AltName: Full=Protein EMBRYO
           DEFECTIVE 1270; Flags: Precursor
 gi|9294066|dbj|BAB02023.1| unnamed protein product [Arabidopsis thaliana]
 gi|332642528|gb|AEE76049.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 1440

 Score =  161 bits (408), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 99/365 (27%), Positives = 180/365 (49%), Gaps = 5/365 (1%)

Query: 333 VLKQLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQ 392
           VL +    ++A+  F   R +         Y  M+G+  R+ +F    +L+D M + GC 
Sbjct: 200 VLGRWNQESLAVEIFT--RAEPTVGDRVQVYNAMMGVYSRSGKFSKAQELVDAMRQRGCV 257

Query: 393 PNVVTYNRLIHSYGRANYL--NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAM 450
           P+++++N LI++  ++  L  N A+++   ++  G  PD +TY TL+   ++   LD A+
Sbjct: 258 PDLISFNTLINARLKSGGLTPNLAVELLDMVRNSGLRPDAITYNTLLSACSRDSNLDGAV 317

Query: 451 DMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQ 510
            +++ M+A    PD +TY+ +I+  G+ G    A +LF E+  +G  P+ VTYN ++   
Sbjct: 318 KVFEDMEAHRCQPDLWTYNAMISVYGRCGLAAEAERLFMELELKGFFPDAVTYNSLLYAF 377

Query: 511 AKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMR-RKNWVPD 569
           A+ RN +   ++Y+ MQ  GF  D++TY+ ++ + G  G LD A  ++ +M+      PD
Sbjct: 378 ARERNTEKVKEVYQQMQKMGFGKDEMTYNTIIHMYGKQGQLDLALQLYKDMKGLSGRNPD 437

Query: 570 EPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQ 629
              Y +L+D  GKA    +A      ML  G++P + T ++L+  + + G+  +A     
Sbjct: 438 AITYTVLIDSLGKANRTVEAAALMSEMLDVGIKPTLQTYSALICGYAKAGKREEAEDTFS 497

Query: 630 GMLNLGLKPSLQTYTLLLSCCTEARSPYDMGFCHELMAVSGHPAHMFLLSMPSPGPDGQN 689
            ML  G KP    Y+++L               +  M   GH     L  +   G   +N
Sbjct: 498 CMLRSGTKPDNLAYSVMLDVLLRGNETRKAWGLYRDMISDGHTPSYTLYELMILGLMKEN 557

Query: 690 VRDHV 694
             D +
Sbjct: 558 RSDDI 562



 Score =  142 bits (357), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 86/289 (29%), Positives = 138/289 (47%), Gaps = 2/289 (0%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           R +G + D  TY T++    R        K+ + M    CQP++ TYN +I  YGR    
Sbjct: 289 RNSGLRPDAITYNTLLSACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMISVYGRCGLA 348

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
            EA  +F ++++ G  PD VTY +L+   A+    +   ++Y++MQ  G   D  TY+ I
Sbjct: 349 AEAERLFMELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTYNTI 408

Query: 472 INCLGKAGHLQAAHQLFCEMVN-QGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAG 530
           I+  GK G L  A QL+ +M    G  P+ +TY ++I    KA     A  L  +M + G
Sbjct: 409 IHMYGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRTVEAAALMSEMLDVG 468

Query: 531 FEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAW 590
            +P   TYS ++      G  +EAE  F+ M R    PD   Y +++D+  +    RKAW
Sbjct: 469 IKPTLQTYSALICGYAKAGKREEAEDTFSCMLRSGTKPDNLAYSVMLDVLLRGNETRKAW 528

Query: 591 EWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNL-GLKP 638
             Y  M+  G  P+      ++   ++  +  D    ++ M  L G+ P
Sbjct: 529 GLYRDMISDGHTPSYTLYELMILGLMKENRSDDIQKTIRDMEELCGMNP 577



 Score =  139 bits (350), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 82/308 (26%), Positives = 161/308 (52%), Gaps = 4/308 (1%)

Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLI 402
           AL  F WL  +     +      ++G+LGR  Q     ++  +         V  YN ++
Sbjct: 174 ALEVFEWLNLRHWHSPNARMVAAILGVLGRWNQESLAVEIFTR-AEPTVGDRVQVYNAMM 232

Query: 403 HSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFL--DVAMDMYKKMQAAG 460
             Y R+   ++A ++   M+  GC PD +++ TLI+   K+G L  ++A+++   ++ +G
Sbjct: 233 GVYSRSGKFSKAQELVDAMRQRGCVPDLISFNTLINARLKSGGLTPNLAVELLDMVRNSG 292

Query: 461 LSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSAL 520
           L PD  TY+ +++   +  +L  A ++F +M    C P+L TYN MI++  +      A 
Sbjct: 293 LRPDAITYNTLLSACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMISVYGRCGLAAEAE 352

Query: 521 KLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLW 580
           +L+ +++  GF PD VTY+ ++         ++ + V+ +M++  +  DE  Y  ++ ++
Sbjct: 353 RLFMELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTYNTIIHMY 412

Query: 581 GKAGNVRKAWEWYEAML-QAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPS 639
           GK G +  A + Y+ M   +G  P+  T   L+ +  +  +  +A  L+  ML++G+KP+
Sbjct: 413 GKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRTVEAAALMSEMLDVGIKPT 472

Query: 640 LQTYTLLL 647
           LQTY+ L+
Sbjct: 473 LQTYSALI 480



 Score =  117 bits (294), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 75/307 (24%), Positives = 146/307 (47%)

Query: 352  RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
            RQ+G   D  T+ +++    +   +     + + M+RDG  P V + N L+H+      L
Sbjct: 779  RQSGRTPDLKTWNSLMSAYAQCGCYERARAIFNTMMRDGPSPTVESINILLHALCVDGRL 838

Query: 412  NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
             E   V +++Q +G +  + +   ++D  A+AG +     +Y  M+AAG  P    Y ++
Sbjct: 839  EELYVVVEELQDMGFKISKSSILLMLDAFARAGNIFEVKKIYSSMKAAGYLPTIRLYRMM 898

Query: 472  INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF 531
            I  L K   ++ A  +  EM        L  +N M+ +     +Y+  +++Y+ ++  G 
Sbjct: 899  IELLCKGKRVRDAEIMVSEMEEANFKVELAIWNSMLKMYTAIEDYKKTVQVYQRIKETGL 958

Query: 532  EPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWE 591
            EPD+ TY+ ++ +       +E   +  +MR     P    Y  L+  +GK   + +A +
Sbjct: 959  EPDETTYNTLIIMYCRDRRPEEGYLLMQQMRNLGLDPKLDTYKSLISAFGKQKCLEQAEQ 1018

Query: 592  WYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCT 651
             +E +L  GL+ +    ++++      G  S A  LLQ M N G++P+L T  LL+   +
Sbjct: 1019 LFEELLSKGLKLDRSFYHTMMKISRDSGSDSKAEKLLQMMKNAGIEPTLATMHLLMVSYS 1078

Query: 652  EARSPYD 658
             + +P +
Sbjct: 1079 SSGNPQE 1085



 Score =  109 bits (273), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 106/501 (21%), Positives = 204/501 (40%), Gaps = 51/501 (10%)

Query: 352  RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
            + AG+      Y  M+ +L + ++      ++ +M     +  +  +N ++  Y      
Sbjct: 884  KAAGYLPTIRLYRMMIELLCKGKRVRDAEIMVSEMEEANFKVELAIWNSMLKMYTAIEDY 943

Query: 412  NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
             + + V+++++  G EPD  TY TLI ++ +    +    + ++M+  GL P   TY  +
Sbjct: 944  KKTVQVYQRIKETGLEPDETTYNTLIIMYCRDRRPEEGYLLMQQMRNLGLDPKLDTYKSL 1003

Query: 472  INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF 531
            I+  GK   L+ A QLF E++++G   +   Y+ M+ +   + +   A KL + M+NAG 
Sbjct: 1004 ISAFGKQKCLEQAEQLFEELLSKGLKLDRSFYHTMMKISRDSGSDSKAEKLLQMMKNAGI 1063

Query: 532  EPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWE 591
            EP   T  ++M      G   EAE V + ++          Y  ++D + ++ +     E
Sbjct: 1064 EPTLATMHLLMVSYSSSGNPQEAEKVLSNLKDTEVELTTLPYSSVIDAYLRSKDYNSGIE 1123

Query: 592  WYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCT 651
                M + GL P+    + + + F+R    S              K  ++   LL     
Sbjct: 1124 RLLEMKKEGLEPD----HRIWTCFVRAASFS--------------KEKIEVMLLL----- 1160

Query: 652  EARSPYDMGFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRESKRG 711
              ++  D+GF   +  ++G P  +                  V  + E + S +  +   
Sbjct: 1161 --KALEDIGFDLPIRLLAGRPELLV---------------SEVDGWFEKLKSIEDNAALN 1203

Query: 712  LVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAVKEKGMSYWLINLHVMSDGTAVIALS 771
             V+A+++ L    L+  A  V+++  ++ ++   V       W  +   +S G A++AL+
Sbjct: 1204 FVNALLNLLWAFELRATASWVFQLGIKRGIFSLDVFRVADKDWGADFRRLSGGAALVALT 1263

Query: 772  RTLAWFRKQMLISGVG----PSRIDIVTGWGRRSRVTGTSLVRQAVQELLHMFSFPFFTE 827
                W       S  G    P  + ++TG    +   G SL +     L  M S PF   
Sbjct: 1264 ---LWLDHMQDASLEGYPESPKSVVLITG---TAEYNGISLDKTLKACLWEMGS-PFLPC 1316

Query: 828  NGNSGCFVGCGEPLNKWLLQS 848
               +G  V     L  WL  S
Sbjct: 1317 KTRTGLLVAKAHSLRMWLKDS 1337



 Score =  108 bits (269), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 73/296 (24%), Positives = 140/296 (47%), Gaps = 19/296 (6%)

Query: 390  GCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVA 449
             C P    Y  +I +YG+     +A  V   ++  G  PD  T+ +L+  +A+ G  + A
Sbjct: 750  ACSP---MYTDIIEAYGKQKLWQKAESVVGNLRQSGRTPDLKTWNSLMSAYAQCGCYERA 806

Query: 450  MDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIAL 509
              ++  M   G SP   + +++++ L   G L+  + +  E+ + G   +  +  +M+  
Sbjct: 807  RAIFNTMMRDGPSPTVESINILLHALCVDGRLEELYVVVEELQDMGFKISKSSILLMLDA 866

Query: 510  QAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPD 569
             A+A N     K+Y  M+ AG+ P    Y +++E+L     + +AE + +EM   N+  +
Sbjct: 867  FARAGNIFEVKKIYSSMKAAGYLPTIRLYRMMIELLCKGKRVRDAEIMVSEMEEANFKVE 926

Query: 570  EPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQ 629
              ++  ++ ++    + +K  + Y+ + + GL P+  T N+L+  + R  +  + Y L+Q
Sbjct: 927  LAIWNSMLKMYTAIEDYKKTVQVYQRIKETGLEPDETTYNTLIIMYCRDRRPEEGYLLMQ 986

Query: 630  GMLNLGLKPSLQTYTLLLS------CCTEARSPY----------DMGFCHELMAVS 669
             M NLGL P L TY  L+S      C  +A   +          D  F H +M +S
Sbjct: 987  QMRNLGLDPKLDTYKSLISAFGKQKCLEQAEQLFEELLSKGLKLDRSFYHTMMKIS 1042



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 74/345 (21%), Positives = 143/345 (41%), Gaps = 11/345 (3%)

Query: 369 ILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEP 428
           +L +   F    + L   + +G +    T   ++ SY  +   +EA ++ + ++      
Sbjct: 583 VLVKGECFDLAARQLKVAITNGYELENDTLLSILGSYSSSGRHSEAFELLEFLKEHASGS 642

Query: 429 DRVTYCTLIDIHAKAGFLDVAMDMYKK---MQAAGLSPDTFTYSVIINCLGKAGHLQAAH 485
            R+    LI +H K   L  A+D Y     +        T  Y  +++C     H   A 
Sbjct: 643 KRLITEALIVLHCKVNNLSAALDEYFADPCVHGWCFGSSTM-YETLLHCCVANEHYAEAS 701

Query: 486 QLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFE-PDKVTYSIVMEV 544
           Q+F ++   GC  +      M+ +  K    ++A ++    +  GF       Y+ ++E 
Sbjct: 702 QVFSDLRLSGCEASESVCKSMVVVYCKLGFPETAHQVVNQAETKGFHFACSPMYTDIIEA 761

Query: 545 LGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPN 604
            G      +AE+V   +R+    PD   +  L+  + + G   +A   +  M++ G  P 
Sbjct: 762 YGKQKLWQKAESVVGNLRQSGRTPDLKTWNSLMSAYAQCGCYERARAIFNTMMRDGPSPT 821

Query: 605 VPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGFCHE 664
           V + N LL A    G+L + Y +++ + ++G K S  +  L+L     A + +++   + 
Sbjct: 822 VESINILLHALCVDGRLEELYVVVEELQDMGFKISKSSILLMLDAFARAGNIFEVKKIYS 881

Query: 665 LMAVSGH-PAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRES 708
            M  +G+ P       M      G+ VRD      E+M SE  E+
Sbjct: 882 SMKAAGYLPTIRLYRMMIELLCKGKRVRDA-----EIMVSEMEEA 921


>gi|357113402|ref|XP_003558492.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16390,
           chloroplastic-like [Brachypodium distachyon]
          Length = 688

 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 136/562 (24%), Positives = 249/562 (44%), Gaps = 70/562 (12%)

Query: 318 LGNTNYSMDAYQANQVLKQLQDH---TVALGFFNWLRRQAGFKHDEHTYTTMVGILGRAR 374
           LGN          N VLK L+     +     ++ + R  G + D  T++T++     AR
Sbjct: 152 LGNAEVRNKGILYNVVLKALRKRRRWSDTEALWDEMLRD-GVQPDNTTFSTVISC---AR 207

Query: 375 QFGAINKLLD---QMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRV 431
             G   K ++   +M   GC P+++TY+ +I +YGRA   + AL ++ + +   C+ D V
Sbjct: 208 ACGLPRKAVEWFEKMPGLGCSPDMLTYSAVIDAYGRAGDADMALRLYDRARAEKCQLDPV 267

Query: 432 TYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEM 491
              T+I +H+ +G    A++++++M+A G+ P+   Y+ +++ +G+A        +  EM
Sbjct: 268 ICATVIKVHSTSGNFAGALNVFEEMKAVGVKPNLVVYNTVLDAMGRAMRPWVVKTIHREM 327

Query: 492 VNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYL 551
           V+Q   PN  TY  ++    +AR  + A+ +YR M++   + D V Y++++ +    GY+
Sbjct: 328 VSQQVQPNRATYCCLLQAYTRARYGEDAMVVYRMMKDEVMDIDVVLYNMLLSMCADIGYI 387

Query: 552 DEAEAVFAEMRRKN---WVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTC 608
           DEAE +F +M+      + PD   Y  +V L+   GNV  A    + M +AG +PN+   
Sbjct: 388 DEAEEIFRDMKAHTDTRFKPDSWTYSSMVTLYSCTGNVLGAEGILKEMAEAGFKPNIFIL 447

Query: 609 NSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGFCHELMAV 668
            SL+  + + G   D       + +L ++P                   D  FC  L+ V
Sbjct: 448 TSLIRCYGKAGHTDDVVRSFGMLEDLNIRP-------------------DDRFCGCLLTV 488

Query: 669 SGHPAHMFLLSMPSPGPDGQNVRD-------HVGSFLEMMHSED------RESKRGLVDA 715
           +            +P  +   V D        +G+ ++++   +      RE+ RG++  
Sbjct: 489 AAD----------TPVEELGKVVDCIDRSNAQLGTVVKLLVDRNASTESFREAARGILSG 538

Query: 716 V------------VDFLHKSGLKEEAGSVWEVAAQKNVYPDAVKEKGMSYWLINLHVMSD 763
           V            +D     G  E+A ++ +VA Q +VY + V+ K  + W ++L  +S 
Sbjct: 539 VRGVVKVPYCNCLMDLCVNLGQTEKACALLDVALQLDVYRN-VQTKTQTQWSLHLRGLSV 597

Query: 764 GTAVIALSRTLAWFRKQMLISGVGPSRIDIVTGWGRRSRVTGTSLVRQAVQELLHMFSFP 823
           G A+  L   +   R  +      P  + I TG GR   +     +  A +  L     P
Sbjct: 598 GAALTTLHVWMNDLRSTLQSGEELPPLLGIHTGEGR--NMYSDKGLASAFESHLKEIDAP 655

Query: 824 FFTENGNSGCFVGCGEPLNKWL 845
           F      +G F+        WL
Sbjct: 656 FHAAPDKAGWFLTTSVAAKHWL 677


>gi|359475386|ref|XP_003631674.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39710-like [Vitis vinifera]
          Length = 762

 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 94/317 (29%), Positives = 165/317 (52%), Gaps = 17/317 (5%)

Query: 350 LRRQAGFKHDEHTYTTMVGILGRARQFGAIN----KLLDQMVRDGCQPNVVTYNRLIHSY 405
           L + +GF     +Y +++  + R+R  G++     ++  +M+R    PNV TYN LI  +
Sbjct: 167 LAKSSGFMPGVLSYNSVLDAIVRSR--GSVKLSAEEVYREMIRSRVSPNVYTYNILIRGF 224

Query: 406 GRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDT 465
                L + L  F +M+  GC P+ VTY TLID + K G +D A  + K M + G+ P+ 
Sbjct: 225 CSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGRIDEAFGLLKSMSSKGMQPNL 284

Query: 466 FTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRD 525
            +Y+VIIN L + G ++ A ++  EM  +G  P+ VTYN ++    K  N+  AL ++ +
Sbjct: 285 ISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNTLLNGYCKEGNFHQALVIHAE 344

Query: 526 MQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGN 585
           M   G  P  VTY+ ++  +     L+ A   F +MR +   P+E  Y  L+D + + G 
Sbjct: 345 MVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRGLRPNERTYTTLIDGFSRQGL 404

Query: 586 VRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTL 645
           + +A+     M ++G  P+V T N+ +     + ++ +A  ++Q M+  GL P + +Y+ 
Sbjct: 405 LNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEALGVVQEMVEKGLAPDVVSYST 464

Query: 646 LLSCCTEARSPYDMGFC 662
           ++S           GFC
Sbjct: 465 IIS-----------GFC 470



 Score =  150 bits (379), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 116/397 (29%), Positives = 185/397 (46%), Gaps = 23/397 (5%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           GF  DE TY T++    +   F     +  +MVR+G  P+VVTY  LI+S  +A  LN A
Sbjct: 314 GFTPDEVTYNTLLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRA 373

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
           ++ F QM++ G  P+  TY TLID  ++ G L+ A  +  +M  +G SP   TY+  I+ 
Sbjct: 374 MEFFDQMRIRGLRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHG 433

Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPD 534
                 ++ A  +  EMV +G  P++V+Y+ +I+   +      A ++ ++M   G  PD
Sbjct: 434 HCVLERMEEALGVVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPD 493

Query: 535 KVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYE 594
            VTYS +++ L     L EA  +  EM      PDE  Y  L++ +   G++ KA   ++
Sbjct: 494 AVTYSSLIQGLCEMRRLTEACDLSQEMLDMGLPPDEFTYTTLINAYCVEGDLNKALHLHD 553

Query: 595 AMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCT--E 652
            M+  G  P+  T + L++   +  +  +A  LL  ++     PS  TY  L+  C+  E
Sbjct: 554 EMIHKGFLPDAVTYSVLINGLNKQARTREAKRLLFKLIYEESVPSDVTYDTLIENCSNIE 613

Query: 653 ARSPYDM--GFCHELMAVSGHPAHMFLLSMPS----PGPDGQNVRDH-----------VG 695
            +S   +  GFC   M    H A     SM      PG    NV  H             
Sbjct: 614 FKSVVALIKGFC---MKGLMHEADRVFESMVERNHKPGEAVYNVIIHGHCRGGNLPKAFN 670

Query: 696 SFLEMMHSEDRESKRGLVDAVVDFLHKSGLKEEAGSV 732
            + EM+HS        ++  ++  L K G+ EE   V
Sbjct: 671 LYKEMIHSGFVPHTVTVI-TLIKALFKEGMNEEMSEV 706



 Score =  148 bits (373), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 97/327 (29%), Positives = 149/327 (45%), Gaps = 51/327 (15%)

Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLI 402
           A+ FF+ +R + G + +E TYTT++    R        ++L++M   G  P+VVTYN  I
Sbjct: 373 AMEFFDQMRIR-GLRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFI 431

Query: 403 HSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLS 462
           H +     + EAL V ++M   G  PD V+Y T+I    + G LD A  M ++M   G+S
Sbjct: 432 HGHCVLERMEEALGVVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVS 491

Query: 463 PDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKL 522
           PD  TYS +I  L +   L  A  L  EM++ G  P+  TY  +I       +   AL L
Sbjct: 492 PDAVTYSSLIQGLCEMRRLTEACDLSQEMLDMGLPPDEFTYTTLINAYCVEGDLNKALHL 551

Query: 523 YRDMQNAGFEPDKVTYSIVMEVL------------------------------------- 545
           + +M + GF PD VTYS+++  L                                     
Sbjct: 552 HDEMIHKGFLPDAVTYSVLINGLNKQARTREAKRLLFKLIYEESVPSDVTYDTLIENCSN 611

Query: 546 -----------GHC--GYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEW 592
                      G C  G + EA+ VF  M  +N  P E VY +++    + GN+ KA+  
Sbjct: 612 IEFKSVVALIKGFCMKGLMHEADRVFESMVERNHKPGEAVYNVIIHGHCRGGNLPKAFNL 671

Query: 593 YEAMLQAGLRPNVPTCNSLLSAFLRVG 619
           Y+ M+ +G  P+  T  +L+ A  + G
Sbjct: 672 YKEMIHSGFVPHTVTVITLIKALFKEG 698



 Score =  142 bits (357), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 87/287 (30%), Positives = 144/287 (50%)

Query: 362 TYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQM 421
           +Y  ++  L R        ++L++M   G  P+ VTYN L++ Y +    ++AL +  +M
Sbjct: 286 SYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNTLLNGYCKEGNFHQALVIHAEM 345

Query: 422 QVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHL 481
              G  P  VTY  LI+   KA  L+ AM+ + +M+  GL P+  TY+ +I+   + G L
Sbjct: 346 VRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRGLRPNERTYTTLIDGFSRQGLL 405

Query: 482 QAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIV 541
             A+++  EM   G  P++VTYN  I         + AL + ++M   G  PD V+YS +
Sbjct: 406 NEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEALGVVQEMVEKGLAPDVVSYSTI 465

Query: 542 MEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGL 601
           +      G LD A  +  EM  K   PD   Y  L+    +   + +A +  + ML  GL
Sbjct: 466 ISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQGLCEMRRLTEACDLSQEMLDMGL 525

Query: 602 RPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
            P+  T  +L++A+   G L+ A HL   M++ G  P   TY++L++
Sbjct: 526 PPDEFTYTTLINAYCVEGDLNKALHLHDEMIHKGFLPDAVTYSVLIN 572



 Score =  107 bits (268), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 77/326 (23%), Positives = 149/326 (45%), Gaps = 23/326 (7%)

Query: 333 VLKQLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQ 392
           +LK   D T+ L F  W R    F  D H     + IL R + +     L  ++      
Sbjct: 64  LLKSQFDQTLTLKFLTWARNHPFF--DSHCKCLSLHILTRFKLYKTAQTLAQELALSASD 121

Query: 393 PNVVT-YNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMD 451
           P+  + +  L  SY   N  +   D+                  ++  ++    +D A++
Sbjct: 122 PSGSSIFQCLKDSYHVYNSSSAVFDL------------------MVKSYSHLNMIDQAVN 163

Query: 452 MYKKMQAAGLSPDTFTYSVIINCLGKA-GHLQ-AAHQLFCEMVNQGCIPNLVTYNIMIAL 509
                +++G  P   +Y+ +++ + ++ G ++ +A +++ EM+     PN+ TYNI+I  
Sbjct: 164 TINLAKSSGFMPGVLSYNSVLDAIVRSRGSVKLSAEEVYREMIRSRVSPNVYTYNILIRG 223

Query: 510 QAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPD 569
                  Q  L  + +M+  G  P+ VTY+ +++     G +DEA  +   M  K   P+
Sbjct: 224 FCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGRIDEAFGLLKSMSSKGMQPN 283

Query: 570 EPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQ 629
              Y ++++   + G++++AWE  E M   G  P+  T N+LL+ + + G    A  +  
Sbjct: 284 LISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNTLLNGYCKEGNFHQALVIHA 343

Query: 630 GMLNLGLKPSLQTYTLLLSCCTEARS 655
            M+  G+ PS+ TYT L++   +AR+
Sbjct: 344 EMVRNGVSPSVVTYTALINSMCKARN 369



 Score =  107 bits (266), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 80/322 (24%), Positives = 137/322 (42%), Gaps = 54/322 (16%)

Query: 333 VLKQLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQ 392
           VL+++++   ALG    +  + G   D  +Y+T++    R  +     ++  +MV  G  
Sbjct: 436 VLERMEE---ALGVVQEMVEK-GLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVS 491

Query: 393 PNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDM 452
           P+ VTY+ LI        L EA D+ ++M  +G  PD  TY TLI+ +   G L+ A+ +
Sbjct: 492 PDAVTYSSLIQGLCEMRRLTEACDLSQEMLDMGLPPDEFTYTTLINAYCVEGDLNKALHL 551

Query: 453 YKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTY--------- 503
           + +M   G  PD  TYSV+IN L K    + A +L  +++ +  +P+ VTY         
Sbjct: 552 HDEMIHKGFLPDAVTYSVLINGLNKQARTREAKRLLFKLIYEESVPSDVTYDTLIENCSN 611

Query: 504 -----------------------------------------NIMIALQAKARNYQSALKL 522
                                                    N++I    +  N   A  L
Sbjct: 612 IEFKSVVALIKGFCMKGLMHEADRVFESMVERNHKPGEAVYNVIIHGHCRGGNLPKAFNL 671

Query: 523 YRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGK 582
           Y++M ++GF P  VT   +++ L   G  +E   V  +  R   + +  +  +LV++  K
Sbjct: 672 YKEMIHSGFVPHTVTVITLIKALFKEGMNEEMSEVIGDTLRSCRLNEAELAKVLVEINHK 731

Query: 583 AGNVRKAWEWYEAMLQAGLRPN 604
            GN+         M + GL PN
Sbjct: 732 EGNMEAVLNVLTDMAKDGLLPN 753


>gi|302759218|ref|XP_002963032.1| hypothetical protein SELMODRAFT_404554 [Selaginella moellendorffii]
 gi|300169893|gb|EFJ36495.1| hypothetical protein SELMODRAFT_404554 [Selaginella moellendorffii]
          Length = 1398

 Score =  161 bits (407), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 140/535 (26%), Positives = 233/535 (43%), Gaps = 51/535 (9%)

Query: 328  YQANQVLKQLQ-DHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQM 386
            +Q   VLK+++ D +++L  F W +   GFKHD   Y+TM+ ILG    +     L  ++
Sbjct: 869  HQVCVVLKKIKRDASLSLKLFTWAKTIPGFKHDLVNYSTMIMILGDDGNYLMAEALFLEI 928

Query: 387  VRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFL 446
               G + +    N +I  Y R     +A+      Q+    P R+          +  FL
Sbjct: 929  QELGLRLDTFAVNNMIRCYTR----EDAILWLSPGQLHLRPPHRLVR------ELQRIFL 978

Query: 447  DVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIM 506
            D        ++A+  + D  T++ +I+   K  +   A +   +M   G   +  TY I+
Sbjct: 979  D--------LRASPHNADAQTFNTMIHNFCKHRNFANAREAANQMKAWGIPFSSATYAIL 1030

Query: 507  IALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNW 566
            I + AKAR+ ++A +LY D   +G E + + Y+ V+   G  G+   A+ +  ++R+   
Sbjct: 1031 IHMYAKARDSKAAAELYADYLRSGLESNLIVYNNVILSNGSSGFPGHAQNILGDIRKAGL 1090

Query: 567  VPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYH 626
             PD   Y  L+  W +AG + +A  W+    +    P++  CN+L+  +L+  ++  A  
Sbjct: 1091 APDRFTYCTLISSWARAGAMLQARRWFNKACKTKAGPSIEMCNALIDGYLKAREVEPAKF 1150

Query: 627  LL-QGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGFCHELMAVSGHPAHMFLLSMPS--- 682
            +L + M   G++P+LQTYT+LL   T + +  D     E+M  S  P  +   +  +   
Sbjct: 1151 ILTKVMPERGVEPTLQTYTILLGHYTSSVNVADSRAVREMMKSSSKPPPLPAAAAAAAAG 1210

Query: 683  ---------PGPD--------GQNVRDHVGSFLEMMHSEDRESK-----RGLVDAVVDFL 720
                     PG D        G      + S+      + R  K     R L DA+V+ L
Sbjct: 1211 EGGGGGDDHPGVDEFLNEILQGLRAIKELKSYSREFFRKLRMDKPPRWGRWLADALVNHL 1270

Query: 721  HKSGLKEEAGSVWEVAAQKNVYPDAVKEKGMSYWLINLHVMSDGTAVIALSRTLAWFRKQ 780
            H  G   EA  VWE  +   +YP  + E       I L  MS GTA++AL+  L   R++
Sbjct: 1271 HCFGYAREAFYVWEGVSSTELYPRGIWEDWQGARFIWLQDMSSGTAMVALTSGLIVSRRK 1330

Query: 781  MLISGVGPSRIDIVTGWGRRSRVTGTSLVRQAVQELLHMFSFPF--FTENGNSGC 833
            +      P R+ IV G+        +  V  AV   L     PF  F   G   C
Sbjct: 1331 LTRGFERPERVIIVCGYASNK----SKEVTHAVNRTLVALDSPFEPFISMGRFMC 1381


>gi|224083253|ref|XP_002306972.1| predicted protein [Populus trichocarpa]
 gi|222856421|gb|EEE93968.1| predicted protein [Populus trichocarpa]
          Length = 709

 Score =  161 bits (407), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 92/318 (28%), Positives = 160/318 (50%)

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
           ++G   +E TY+ ++   G A ++ +   +L +M     QPN   ++R++ SY       
Sbjct: 368 RSGVSPNEQTYSFLIDAYGNAGRWESARIVLKEMEASNVQPNAYVFSRILSSYRDKGEWQ 427

Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
           ++  V ++M+  G  PDRV Y  +ID   K   LD AM  + +M + G+ PDT T++ +I
Sbjct: 428 KSFQVLREMENSGVRPDRVFYNVMIDTFGKFNCLDHAMATFDRMLSEGIEPDTVTWNTLI 487

Query: 473 NCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFE 532
           +C  +AG    A +LF EM+  G  P   T+NIMI        +     L   M++ G  
Sbjct: 488 DCHCRAGKHDRAEELFEEMMEGGYSPCNTTFNIMINSFGDQERWDDVKNLLAHMRSQGLV 547

Query: 533 PDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEW 592
           P+ VTY+ ++++ G  G  ++A     +M+     P   +Y  L++ + + G   +A   
Sbjct: 548 PNSVTYTTLIDIYGKSGRFNDAIECLDDMKAAGLKPSSTMYNALINAYAQRGLSEQAVSA 607

Query: 593 YEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTE 652
           + AM   GL+P++   NSL++AF    + ++A+ +LQ M    LKP + TYT L+     
Sbjct: 608 FRAMRVDGLKPSLLALNSLINAFGEDRRDAEAFTVLQYMKENDLKPDVVTYTTLMKALIR 667

Query: 653 ARSPYDMGFCHELMAVSG 670
                 +   +E M +SG
Sbjct: 668 VEKFDKVPSVYEEMILSG 685



 Score =  143 bits (361), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 85/303 (28%), Positives = 147/303 (48%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           R  G K     Y  ++    +A        ++ +M R G  PN  TY+ LI +YG A   
Sbjct: 332 RDNGLKPRTRAYNALLRGYVKAGLLKDAEFVVSEMERSGVSPNEQTYSFLIDAYGNAGRW 391

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
             A  V K+M+    +P+   +  ++  +   G    +  + ++M+ +G+ PD   Y+V+
Sbjct: 392 ESARIVLKEMEASNVQPNAYVFSRILSSYRDKGEWQKSFQVLREMENSGVRPDRVFYNVM 451

Query: 472 INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF 531
           I+  GK   L  A   F  M+++G  P+ VT+N +I    +A  +  A +L+ +M   G+
Sbjct: 452 IDTFGKFNCLDHAMATFDRMLSEGIEPDTVTWNTLIDCHCRAGKHDRAEELFEEMMEGGY 511

Query: 532 EPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWE 591
            P   T++I++   G     D+ + + A MR +  VP+   Y  L+D++GK+G    A E
Sbjct: 512 SPCNTTFNIMINSFGDQERWDDVKNLLAHMRSQGLVPNSVTYTTLIDIYGKSGRFNDAIE 571

Query: 592 WYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCT 651
             + M  AGL+P+    N+L++A+ + G    A    + M   GLKPSL     L++   
Sbjct: 572 CLDDMKAAGLKPSSTMYNALINAYAQRGLSEQAVSAFRAMRVDGLKPSLLALNSLINAFG 631

Query: 652 EAR 654
           E R
Sbjct: 632 EDR 634



 Score =  140 bits (352), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 83/283 (29%), Positives = 140/283 (49%), Gaps = 3/283 (1%)

Query: 369 ILGRARQFGAINK---LLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVG 425
           IL   R  G   K   +L +M   G +P+ V YN +I ++G+ N L+ A+  F +M   G
Sbjct: 416 ILSSYRDKGEWQKSFQVLREMENSGVRPDRVFYNVMIDTFGKFNCLDHAMATFDRMLSEG 475

Query: 426 CEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAH 485
            EPD VT+ TLID H +AG  D A +++++M   G SP   T++++IN  G         
Sbjct: 476 IEPDTVTWNTLIDCHCRAGKHDRAEELFEEMMEGGYSPCNTTFNIMINSFGDQERWDDVK 535

Query: 486 QLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVL 545
            L   M +QG +PN VTY  +I +  K+  +  A++   DM+ AG +P    Y+ ++   
Sbjct: 536 NLLAHMRSQGLVPNSVTYTTLIDIYGKSGRFNDAIECLDDMKAAGLKPSSTMYNALINAY 595

Query: 546 GHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNV 605
              G  ++A + F  MR     P       L++ +G+     +A+   + M +  L+P+V
Sbjct: 596 AQRGLSEQAVSAFRAMRVDGLKPSLLALNSLINAFGEDRRDAEAFTVLQYMKENDLKPDV 655

Query: 606 PTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
            T  +L+ A +RV +      + + M+  G  P  +   +L S
Sbjct: 656 VTYTTLMKALIRVEKFDKVPSVYEEMILSGCTPDRKARAMLRS 698



 Score =  128 bits (321), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 106/476 (22%), Positives = 206/476 (43%), Gaps = 47/476 (9%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGA--INKLLDQMVRDGCQPNVVTYNRLIHSYGRAN 409
           RQ G+  D   Y+ ++  L R  +  +  + KL  ++  D  + +V   N +I  + +A 
Sbjct: 225 RQDGYPSDFVNYSLIIRSLMRKNRVDSAILQKLYREIECDKLELDVQLSNDIIVGFAKAG 284

Query: 410 YLNEALD-----------------------------------VFKQMQVVGCEPDRVTYC 434
            L++AL+                                   +F++M+  G +P    Y 
Sbjct: 285 DLSKALEFLGVVQGSGLSVKTATLVAVIWALGNCGRTVEAEAIFEEMRDNGLKPRTRAYN 344

Query: 435 TLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQ 494
            L+  + KAG L  A  +  +M+ +G+SP+  TYS +I+  G AG  ++A  +  EM   
Sbjct: 345 ALLRGYVKAGLLKDAEFVVSEMERSGVSPNEQTYSFLIDAYGNAGRWESARIVLKEMEAS 404

Query: 495 GCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEA 554
              PN   ++ +++       +Q + ++ R+M+N+G  PD+V Y+++++  G    LD A
Sbjct: 405 NVQPNAYVFSRILSSYRDKGEWQKSFQVLREMENSGVRPDRVFYNVMIDTFGKFNCLDHA 464

Query: 555 EAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSA 614
            A F  M  +   PD   +  L+D   +AG   +A E +E M++ G  P   T N ++++
Sbjct: 465 MATFDRMLSEGIEPDTVTWNTLIDCHCRAGKHDRAEELFEEMMEGGYSPCNTTFNIMINS 524

Query: 615 FLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGFCHELMAVSGHPAH 674
           F    +  D  +LL  M + GL P+  TYT L+    ++    D   C + M  +G    
Sbjct: 525 FGDQERWDDVKNLLAHMRSQGLVPNSVTYTTLIDIYGKSGRFNDAIECLDDMKAAGLKPS 584

Query: 675 MFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRESKRGLVDAVVDFLHKSGLKEEAGSVWE 734
             + +        + + +   S    M  +  +     ++++++   +     EA +V +
Sbjct: 585 STMYNALINAYAQRGLSEQAVSAFRAMRVDGLKPSLLALNSLINAFGEDRRDAEAFTVLQ 644

Query: 735 VAAQKNVYPDAVKEKGMSYWLINLHVMSDGTAVIALSRTLAWFRKQMLISGVGPSR 790
              + ++ PD V    +   LI +       +V           ++M++SG  P R
Sbjct: 645 YMKENDLKPDVVTYTTLMKALIRVEKFDKVPSVY----------EEMILSGCTPDR 690



 Score =  116 bits (290), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 110/460 (23%), Positives = 191/460 (41%), Gaps = 17/460 (3%)

Query: 362 TYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEAL--DVFK 419
           TY  ++    R         L+ +M +DG   + V Y+ +I S  R N ++ A+   +++
Sbjct: 200 TYNALISACARNNDLEKALNLITRMRQDGYPSDFVNYSLIIRSLMRKNRVDSAILQKLYR 259

Query: 420 QMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAG 479
           +++    E D      +I   AKAG L  A++    +Q +GLS  T T   +I  LG  G
Sbjct: 260 EIECDKLELDVQLSNDIIVGFAKAGDLSKALEFLGVVQGSGLSVKTATLVAVIWALGNCG 319

Query: 480 HLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYS 539
               A  +F EM + G  P    YN ++    KA   + A  +  +M+ +G  P++ TYS
Sbjct: 320 RTVEAEAIFEEMRDNGLKPRTRAYNALLRGYVKAGLLKDAEFVVSEMERSGVSPNEQTYS 379

Query: 540 IVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQA 599
            +++  G+ G  + A  V  EM   N  P+  V+  ++  +   G  +K+++    M  +
Sbjct: 380 FLIDAYGNAGRWESARIVLKEMEASNVQPNAYVFSRILSSYRDKGEWQKSFQVLREMENS 439

Query: 600 GLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSC-CTEARSPYD 658
           G+RP+    N ++  F +   L  A      ML+ G++P   T+  L+ C C   +    
Sbjct: 440 GVRPDRVFYNVMIDTFGKFNCLDHAMATFDRMLSEGIEPDTVTWNTLIDCHCRAGKHDRA 499

Query: 659 MGFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRESKRGLVDAVVD 718
                E+M     P +     M +   D Q   D V + L  M S+           ++D
Sbjct: 500 EELFEEMMEGGYSPCNTTFNIMINSFGD-QERWDDVKNLLAHMRSQGLVPNSVTYTTLID 558

Query: 719 FLHKSGLKEEAGSVWEVAAQKNVYPDAVKEKGMSYWLINLHVMSDGTAVIALSRTLAWFR 778
              KSG   +A    +      + P +     M   LIN +      A   LS       
Sbjct: 559 IYGKSGRFNDAIECLDDMKAAGLKPSST----MYNALINAY------AQRGLSEQAVSAF 608

Query: 779 KQMLISGVGPSRI---DIVTGWGRRSRVTGTSLVRQAVQE 815
           + M + G+ PS +    ++  +G   R      V Q ++E
Sbjct: 609 RAMRVDGLKPSLLALNSLINAFGEDRRDAEAFTVLQYMKE 648



 Score =  110 bits (275), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 90/377 (23%), Positives = 160/377 (42%), Gaps = 53/377 (14%)

Query: 237 VQPRSKAHSNRLNSNFKSNLQPSDAKVVECVSERFSKPSREMKIPAGLAPFSRHFASTGN 296
           ++PR++A++  L    K+ L   DA+ V    ER           +G++P  + ++   +
Sbjct: 336 LKPRTRAYNALLRGYVKAGLL-KDAEFVVSEMER-----------SGVSPNEQTYSFLID 383

Query: 297 VVESVSRILRQWKWGPLAEEALGNTNYSMDAYQANQVLKQLQDHTVALGFFNWLRR--QA 354
              +  R    W+   +  + +  +N   +AY  +++L   +D       F  LR    +
Sbjct: 384 AYGNAGR----WESARIVLKEMEASNVQPNAYVFSRILSSYRDKGEWQKSFQVLREMENS 439

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           G + D   Y  M+   G+           D+M+ +G +P+ VT+N LI  + RA   + A
Sbjct: 440 GVRPDRVFYNVMIDTFGKFNCLDHAMATFDRMLSEGIEPDTVTWNTLIDCHCRAGKHDRA 499

Query: 415 LDVFKQM-----------------------------------QVVGCEPDRVTYCTLIDI 439
            ++F++M                                   +  G  P+ VTY TLIDI
Sbjct: 500 EELFEEMMEGGYSPCNTTFNIMINSFGDQERWDDVKNLLAHMRSQGLVPNSVTYTTLIDI 559

Query: 440 HAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPN 499
           + K+G  + A++    M+AAGL P +  Y+ +IN   + G  + A   F  M   G  P+
Sbjct: 560 YGKSGRFNDAIECLDDMKAAGLKPSSTMYNALINAYAQRGLSEQAVSAFRAMRVDGLKPS 619

Query: 500 LVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFA 559
           L+  N +I    + R    A  + + M+    +PD VTY+ +M+ L      D+  +V+ 
Sbjct: 620 LLALNSLINAFGEDRRDAEAFTVLQYMKENDLKPDVVTYTTLMKALIRVEKFDKVPSVYE 679

Query: 560 EMRRKNWVPDEPVYGLL 576
           EM      PD     +L
Sbjct: 680 EMILSGCTPDRKARAML 696



 Score = 89.4 bits (220), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 47/195 (24%), Positives = 87/195 (44%)

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
           + G+     T+  M+   G   ++  +  LL  M   G  PN VTY  LI  YG++   N
Sbjct: 508 EGGYSPCNTTFNIMINSFGDQERWDDVKNLLAHMRSQGLVPNSVTYTTLIDIYGKSGRFN 567

Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
           +A++    M+  G +P    Y  LI+ +A+ G  + A+  ++ M+  GL P     + +I
Sbjct: 568 DAIECLDDMKAAGLKPSSTMYNALINAYAQRGLSEQAVSAFRAMRVDGLKPSLLALNSLI 627

Query: 473 NCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFE 532
           N  G+      A  +   M      P++VTY  ++    +   +     +Y +M  +G  
Sbjct: 628 NAFGEDRRDAEAFTVLQYMKENDLKPDVVTYTTLMKALIRVEKFDKVPSVYEEMILSGCT 687

Query: 533 PDKVTYSIVMEVLGH 547
           PD+   +++   L +
Sbjct: 688 PDRKARAMLRSALKY 702



 Score = 65.1 bits (157), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 71/318 (22%), Positives = 130/318 (40%), Gaps = 46/318 (14%)

Query: 468 YSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQ 527
           YS++I+ LG++  L   ++ F     Q   P  +TYN +I+  A+  + + AL L   M+
Sbjct: 171 YSILIHALGQSEKL---YEAFLLSQRQNLTP--LTYNALISACARNNDLEKALNLITRMR 225

Query: 528 NAGFEPDKVTYSIVMEVLGHCGYLDEA--EAVFAEMRRKNWVPDEPVYGLLVDLWGKAGN 585
             G+  D V YS+++  L     +D A  + ++ E+       D  +   ++  + KAG+
Sbjct: 226 QDGYPSDFVNYSLIIRSLMRKNRVDSAILQKLYREIECDKLELDVQLSNDIIVGFAKAGD 285

Query: 586 VRKAWEW-----------------------------------YEAMLQAGLRPNVPTCNS 610
           + KA E+                                   +E M   GL+P     N+
Sbjct: 286 LSKALEFLGVVQGSGLSVKTATLVAVIWALGNCGRTVEAEAIFEEMRDNGLKPRTRAYNA 345

Query: 611 LLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEA-RSPYDMGFCHELMAVS 669
           LL  +++ G L DA  ++  M   G+ P+ QTY+ L+     A R         E+ A +
Sbjct: 346 LLRGYVKAGLLKDAEFVVSEMERSGVSPNEQTYSFLIDAYGNAGRWESARIVLKEMEASN 405

Query: 670 GHP-AHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRESKRGLVDAVVDFLHKSGLKEE 728
             P A++F   + S    G+  +      L  M +      R   + ++D   K    + 
Sbjct: 406 VQPNAYVFSRILSSYRDKGEWQKSF--QVLREMENSGVRPDRVFYNVMIDTFGKFNCLDH 463

Query: 729 AGSVWEVAAQKNVYPDAV 746
           A + ++    + + PD V
Sbjct: 464 AMATFDRMLSEGIEPDTV 481


>gi|302762967|ref|XP_002964905.1| hypothetical protein SELMODRAFT_167316 [Selaginella moellendorffii]
 gi|300167138|gb|EFJ33743.1| hypothetical protein SELMODRAFT_167316 [Selaginella moellendorffii]
          Length = 773

 Score =  161 bits (407), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 139/533 (26%), Positives = 218/533 (40%), Gaps = 48/533 (9%)

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
           ++G   D  TY ++V     + Q G + +LL +M  +G  P++  YN LI +Y  A  ++
Sbjct: 216 ESGVVADAVTYKSLVDTFAGSNQLGRVEELLREMEDEGNPPDIAGYNSLIEAYADAGNVH 275

Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
            A  VFKQMQ  GC PD  TY TL+ I+   G  +    ++  M+     P   TY+ +I
Sbjct: 276 GAAGVFKQMQRGGCAPDVETYSTLLRIYGNQGCFEQVRSLFSDMKDLSTPPTVATYNSLI 335

Query: 473 NCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFE 532
              G+ G+ Q +  LF +MV+ G  P+  TY+ ++++  +    + A K+++ M      
Sbjct: 336 QVFGEGGYFQESINLFHDMVDSGVKPDDATYSALLSVCGRGGLTREAAKIHQHMLTNEST 395

Query: 533 PDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEW 592
           P     + ++   G      +A   +  +R     P    Y  L+  + K G   +A   
Sbjct: 396 PSLEASAGLISSYGKMAMYKDALVSYYRIREAGLDPQVSAYDALIQGYAKGGLYVEAGST 455

Query: 593 YEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYH--------------------LLQGML 632
             AM +AG +  V + NS++ A+ +VG   +A                      LL    
Sbjct: 456 LYAMNKAGFQAPVSSVNSVMEAYSKVGLHDEALEFFSELQQKEGSEVDERTHETLLGVYC 515

Query: 633 NLGL----------------KPSLQTYTLLLSCCTEARSPYDMG--FCHELMAVSGHPAH 674
           ++GL                 P  + Y LLLS C   RS +D       E++A  G   H
Sbjct: 516 DMGLLEEAKEEFVIIKETSKVPGARVYCLLLSLCVR-RSKWDYATQLLDEMIAAGG--LH 572

Query: 675 MFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRESKRGLVDAVVDFLHKSGLKEEAGSVWE 734
             ++ +     D       V    + +   D E      +A+V+ L     K  A  V  
Sbjct: 573 QVVVGIVRGTYDADFSWQVVEYAFDGLKLRDMEESMDFYNALVELLVYCNQKARAARVLA 632

Query: 735 VAAQKNVYPDAVKEKGMSYWLINLHVMSDGTAVIALSRTLAWFRKQMLISGVGPSRIDIV 794
            A Q+  +P+A   K    W +N+H MS G  V ALS    WF        + P    IV
Sbjct: 633 DAMQRGAFPEAFI-KTRRVWSVNVHRMSAGATVTALS---TWFNDLQECEKL-PFMTSIV 687

Query: 795 TGWG--RRSRVTGTSLVRQAVQELLHMFSFPFFTENGNSGCFVGCGEPLNKWL 845
              G     R      V + VQ  L  ++ P  T + N G  V  GE L  WL
Sbjct: 688 VSCGDIEDHRKVEDLPVAKVVQAFLKHYAAPLETASWNEGRIVCKGEALKPWL 740



 Score =  157 bits (396), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 113/436 (25%), Positives = 196/436 (44%), Gaps = 35/436 (8%)

Query: 319 GNTNYSMDAYQANQVLKQLQ----------DHTVALGFFNWLRRQAGFKHDEHTYTTMVG 368
           G+    MD Y++   ++             D   AL  F +++RQ   K  EH YT M+G
Sbjct: 31  GSVTRCMDLYRSKLTMQDFSLIFREFAARSDWHRALRLFKYMQRQQWCKPTEHIYTIMIG 90

Query: 369 ILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEP 428
           I+GR       +++ + M  +  + NV  +  LI++YGR      +L +  +M+    EP
Sbjct: 91  IMGREGLLEKCSEIFEDMPENDVKWNVYAFTALINAYGRNGQYEASLHLLARMKKEQVEP 150

Query: 429 DRVTYCTLIDIHAKAGF-LDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQL 487
           + +TY T+++  +K G   +  ++++ +M+  G+ PD  TY+ +++     G ++ A  +
Sbjct: 151 NLITYNTVLNACSKGGLDWEGLLNLFAQMRHEGIQPDLITYNTLLSACSSRGLVEQAAMV 210

Query: 488 FCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGH 547
           F  M   G + + VTY  ++   A +       +L R+M++ G  PD   Y+ ++E    
Sbjct: 211 FKTMNESGVVADAVTYKSLVDTFAGSNQLGRVEELLREMEDEGNPPDIAGYNSLIEAYAD 270

Query: 548 CGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPT 607
            G +  A  VF +M+R    PD   Y  L+ ++G  G   +    +  M      P V T
Sbjct: 271 AGNVHGAAGVFKQMQRGGCAPDVETYSTLLRIYGNQGCFEQVRSLFSDMKDLSTPPTVAT 330

Query: 608 CNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGFCHELMA 667
            NSL+  F   G   ++ +L   M++ G+KP   TY+ LLS C         G   E   
Sbjct: 331 YNSLIQVFGEGGYFQESINLFHDMVDSGVKPDDATYSALLSVCGRG------GLTREAAK 384

Query: 668 VSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSED------RESKRGL------VDA 715
           +     H  +L+  S  P  +     + S+ +M   +D      R  + GL       DA
Sbjct: 385 I-----HQHMLTNEST-PSLEASAGLISSYGKMAMYKDALVSYYRIREAGLDPQVSAYDA 438

Query: 716 VVDFLHKSGLKEEAGS 731
           ++    K GL  EAGS
Sbjct: 439 LIQGYAKGGLYVEAGS 454


>gi|10177016|dbj|BAB10204.1| maize crp1 protein-like [Arabidopsis thaliana]
          Length = 680

 Score =  161 bits (407), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 91/316 (28%), Positives = 157/316 (49%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           G   DEHTY+ ++     A ++ +   +L +M     QPN   ++RL+  +       + 
Sbjct: 340 GVSPDEHTYSLLIDAYVNAGRWESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKT 399

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
             V K+M+ +G +PDR  Y  +ID   K   LD AM  + +M + G+ PD  T++ +I+C
Sbjct: 400 FQVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDC 459

Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPD 534
             K G    A ++F  M  +GC+P   TYNIMI        +    +L   M++ G  P+
Sbjct: 460 HCKHGRHIVAEEMFEAMERRGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPN 519

Query: 535 KVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYE 594
            VT++ +++V G  G  ++A     EM+     P   +Y  L++ + + G   +A   + 
Sbjct: 520 VVTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFR 579

Query: 595 AMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEAR 654
            M   GL+P++   NSL++AF    + ++A+ +LQ M   G+KP + TYT L+       
Sbjct: 580 VMTSDGLKPSLLALNSLINAFGEDRRDAEAFAVLQYMKENGVKPDVVTYTTLMKALIRVD 639

Query: 655 SPYDMGFCHELMAVSG 670
               +   +E M +SG
Sbjct: 640 KFQKVPVVYEEMIMSG 655



 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 89/332 (26%), Positives = 158/332 (47%), Gaps = 21/332 (6%)

Query: 325 MDAY-------QANQVLKQLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFG 377
           +DAY        A  VLK+++   V    F + R  AGF+       T            
Sbjct: 352 IDAYVNAGRWESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTF----------- 400

Query: 378 AINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLI 437
              ++L +M   G +P+   YN +I ++G+ N L+ A+  F +M   G EPDRVT+ TLI
Sbjct: 401 ---QVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLI 457

Query: 438 DIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCI 497
           D H K G   VA +M++ M+  G  P   TY+++IN  G         +L  +M +QG +
Sbjct: 458 DCHCKHGRHIVAEEMFEAMERRGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGIL 517

Query: 498 PNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAV 557
           PN+VT+  ++ +  K+  +  A++   +M++ G +P    Y+ ++      G  ++A   
Sbjct: 518 PNVVTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNA 577

Query: 558 FAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLR 617
           F  M      P       L++ +G+     +A+   + M + G++P+V T  +L+ A +R
Sbjct: 578 FRVMTSDGLKPSLLALNSLINAFGEDRRDAEAFAVLQYMKENGVKPDVVTYTTLMKALIR 637

Query: 618 VGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSC 649
           V +      + + M+  G KP  +  ++L S 
Sbjct: 638 VDKFQKVPVVYEEMIMSGCKPDRKARSMLRSA 669



 Score =  125 bits (314), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 79/297 (26%), Positives = 140/297 (47%), Gaps = 4/297 (1%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           G      T  +++  L  + +      L +++ + G +P    YN L+  Y +   L +A
Sbjct: 270 GLSAKTATLVSIISALADSGRTLEAEALFEELRQSGIKPRTRAYNALLKGYVKTGPLKDA 329

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
             +  +M+  G  PD  TY  LID +  AG  + A  + K+M+A  + P++F +S ++  
Sbjct: 330 ESMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWESARIVLKEMEAGDVQPNSFVFSRLLAG 389

Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPD 534
               G  Q   Q+  EM + G  P+   YN++I    K      A+  +  M + G EPD
Sbjct: 390 FRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPD 449

Query: 535 KVTYSIVMEVLGHC--GYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEW 592
           +VT++ +++   HC  G    AE +F  M R+  +P    Y ++++ +G           
Sbjct: 450 RVTWNTLIDC--HCKHGRHIVAEEMFEAMERRGCLPCATTYNIMINSYGDQERWDDMKRL 507

Query: 593 YEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSC 649
              M   G+ PNV T  +L+  + + G+ +DA   L+ M ++GLKPS   Y  L++ 
Sbjct: 508 LGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKPSSTMYNALINA 564



 Score =  124 bits (312), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 81/303 (26%), Positives = 144/303 (47%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           RQ+G K     Y  ++    +         ++ +M + G  P+  TY+ LI +Y  A   
Sbjct: 302 RQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAYVNAGRW 361

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
             A  V K+M+    +P+   +  L+      G       + K+M++ G+ PD   Y+V+
Sbjct: 362 ESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVV 421

Query: 472 INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF 531
           I+  GK   L  A   F  M+++G  P+ VT+N +I    K   +  A +++  M+  G 
Sbjct: 422 IDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRGC 481

Query: 532 EPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWE 591
            P   TY+I++   G     D+ + +  +M+ +  +P+   +  LVD++GK+G    A E
Sbjct: 482 LPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIE 541

Query: 592 WYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCT 651
             E M   GL+P+    N+L++A+ + G    A +  + M + GLKPSL     L++   
Sbjct: 542 CLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRVMTSDGLKPSLLALNSLINAFG 601

Query: 652 EAR 654
           E R
Sbjct: 602 EDR 604



 Score =  109 bits (273), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 101/476 (21%), Positives = 199/476 (41%), Gaps = 47/476 (9%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAIN--KLLDQMVRDGCQPNVVTYNRLIHSYGRAN 409
           RQ G++ D   Y+ ++  L R+ +  ++   +L  ++ RD  + +V   N +I  + ++ 
Sbjct: 195 RQDGYQSDFVNYSLVIQSLTRSNKIDSVMLLRLYKEIERDKLELDVQLVNDIIMGFAKSG 254

Query: 410 YLNEALDV-----------------------------------FKQMQVVGCEPDRVTYC 434
             ++AL +                                   F++++  G +P    Y 
Sbjct: 255 DPSKALQLLGMAQATGLSAKTATLVSIISALADSGRTLEAEALFEELRQSGIKPRTRAYN 314

Query: 435 TLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQ 494
            L+  + K G L  A  M  +M+  G+SPD  TYS++I+    AG  ++A  +  EM   
Sbjct: 315 ALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWESARIVLKEMEAG 374

Query: 495 GCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEA 554
              PN   ++ ++A       +Q   ++ ++M++ G +PD+  Y++V++  G    LD A
Sbjct: 375 DVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHA 434

Query: 555 EAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSA 614
              F  M  +   PD   +  L+D   K G    A E +EAM + G  P   T N ++++
Sbjct: 435 MTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRGCLPCATTYNIMINS 494

Query: 615 FLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGFCHELMAVSGHPAH 674
           +    +  D   LL  M + G+ P++ T+T L+    ++    D   C E M   G    
Sbjct: 495 YGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKPS 554

Query: 675 MFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRESKRGLVDAVVDFLHKSGLKEEAGSVWE 734
             + +        + + +   +   +M S+  +     ++++++   +     EA +V +
Sbjct: 555 STMYNALINAYAQRGLSEQAVNAFRVMTSDGLKPSLLALNSLINAFGEDRRDAEAFAVLQ 614

Query: 735 VAAQKNVYPDAVKEKGMSYWLINLHVMSDGTAVIALSRTLAWFRKQMLISGVGPSR 790
              +  V PD V    +   LI +        V           ++M++SG  P R
Sbjct: 615 YMKENGVKPDVVTYTTLMKALIRVDKFQKVPVVY----------EEMIMSGCKPDR 660



 Score =  107 bits (268), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 78/296 (26%), Positives = 134/296 (45%), Gaps = 3/296 (1%)

Query: 362 TYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA--LDVFK 419
           TY  ++G   R         L+ +M +DG Q + V Y+ +I S  R+N ++    L ++K
Sbjct: 170 TYNALIGACARNNDIEKALNLIAKMRQDGYQSDFVNYSLVIQSLTRSNKIDSVMLLRLYK 229

Query: 420 QMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAG 479
           +++    E D      +I   AK+G    A+ +    QA GLS  T T   II+ L  +G
Sbjct: 230 EIERDKLELDVQLVNDIIMGFAKSGDPSKALQLLGMAQATGLSAKTATLVSIISALADSG 289

Query: 480 HLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYS 539
               A  LF E+   G  P    YN ++    K    + A  +  +M+  G  PD+ TYS
Sbjct: 290 RTLEAEALFEELRQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYS 349

Query: 540 IVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQA 599
           ++++   + G  + A  V  EM   +  P+  V+  L+  +   G  +K ++  + M   
Sbjct: 350 LLIDAYVNAGRWESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSI 409

Query: 600 GLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSC-CTEAR 654
           G++P+    N ++  F +   L  A      ML+ G++P   T+  L+ C C   R
Sbjct: 410 GVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGR 465



 Score =  101 bits (252), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 82/325 (25%), Positives = 150/325 (46%), Gaps = 13/325 (4%)

Query: 342 VALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRL 401
           +A    +WL++       E  Y+ ++  LGR+ +      LL Q  +    P  +TYN L
Sbjct: 120 LAYAVVSWLQKHNLCFSYELLYSILIHALGRSEKLYEAF-LLSQ--KQTLTP--LTYNAL 174

Query: 402 IHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAM--DMYKKMQAA 459
           I +  R N + +AL++  +M+  G + D V Y  +I    ++  +D  M   +YK+++  
Sbjct: 175 IGACARNNDIEKALNLIAKMRQDGYQSDFVNYSLVIQSLTRSNKIDSVMLLRLYKEIERD 234

Query: 460 GLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSA 519
            L  D    + II    K+G    A QL       G      T   +I+  A +     A
Sbjct: 235 KLELDVQLVNDIIMGFAKSGDPSKALQLLGMAQATGLSAKTATLVSIISALADSGRTLEA 294

Query: 520 LKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDL 579
             L+ +++ +G +P    Y+ +++     G L +AE++ +EM ++   PDE  Y LL+D 
Sbjct: 295 EALFEELRQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDA 354

Query: 580 WGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPS 639
           +  AG    A    + M    ++PN    + LL+ F   G+    + +L+ M ++G+KP 
Sbjct: 355 YVNAGRWESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPD 414

Query: 640 LQTYTLLL------SCCTEARSPYD 658
            Q Y +++      +C   A + +D
Sbjct: 415 RQFYNVVIDTFGKFNCLDHAMTTFD 439



 Score = 99.4 bits (246), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 56/208 (26%), Positives = 102/208 (49%), Gaps = 1/208 (0%)

Query: 340 HTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYN 399
           H VA   F  + R+ G      TY  M+   G   ++  + +LL +M   G  PNVVT+ 
Sbjct: 466 HIVAEEMFEAMERR-GCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHT 524

Query: 400 RLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAA 459
            L+  YG++   N+A++  ++M+ VG +P    Y  LI+ +A+ G  + A++ ++ M + 
Sbjct: 525 TLVDVYGKSGRFNDAIECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRVMTSD 584

Query: 460 GLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSA 519
           GL P     + +IN  G+      A  +   M   G  P++VTY  ++    +   +Q  
Sbjct: 585 GLKPSLLALNSLINAFGEDRRDAEAFAVLQYMKENGVKPDVVTYTTLMKALIRVDKFQKV 644

Query: 520 LKLYRDMQNAGFEPDKVTYSIVMEVLGH 547
             +Y +M  +G +PD+   S++   L +
Sbjct: 645 PVVYEEMIMSGCKPDRKARSMLRSALRY 672


>gi|302776386|ref|XP_002971363.1| hypothetical protein SELMODRAFT_451140 [Selaginella moellendorffii]
 gi|300161345|gb|EFJ27961.1| hypothetical protein SELMODRAFT_451140 [Selaginella moellendorffii]
          Length = 745

 Score =  161 bits (407), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 83/254 (32%), Positives = 137/254 (53%)

Query: 308 WKWGPLAEEALGNTNYSMDAYQANQVLKQLQDHTVALGFFNWLRRQAGFKHDEHTYTTMV 367
           ++W P    AL   N+  D ++  +VL  ++D T AL FF W+ +Q G+KHD   YT M+
Sbjct: 450 YRWTPETAAALEAANFRWDPWKVLRVLMGMRDVTAALRFFYWVEKQPGYKHDSFVYTKMI 509

Query: 368 GILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCE 427
            +LGR   F  + +LL ++     + ++VT N +I +   ++  + A+ +F  M+ +  +
Sbjct: 510 SLLGRHHHFSQVEELLMKLQSSDIEVSIVTMNSIIFTLSVSHNPDLAMKIFYWMKDLKVK 569

Query: 428 PDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQL 487
           P+  TY T+ID+  K    D AM +Y++M  AG  PD  TY+V+I  LG+ G + AA  L
Sbjct: 570 PNTRTYTTVIDMLVKMRHFDRAMAIYQEMLDAGCKPDAHTYTVLIQSLGREGKIDAAEHL 629

Query: 488 FCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGH 547
             +M   GC PN+V Y  +I           AL +++ MQ+ G  P+ +TYS++ + L  
Sbjct: 630 LEKMPLNGCKPNVVNYTSLINSLIHYGRVSHALAVFKRMQDEGVMPNSITYSLMSKGLKR 689

Query: 548 CGYLDEAEAVFAEM 561
              L +   V  +M
Sbjct: 690 ANMLHDLVEVEKKM 703



 Score =  156 bits (394), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 90/294 (30%), Positives = 145/294 (49%), Gaps = 9/294 (3%)

Query: 273 KPSREMKIPAGLAPFSRH-----FASTGNVVESVSRILRQWKWGPLAEEALGNTNYSMDA 327
           +PSR    P    PF        F S       V  +LR+  W   ++  +       + 
Sbjct: 93  RPSR----PPRWEPFKSRDTIGSFFSKMEAAIEVGNVLREMGWNEDSQVKVEKLKVPWNP 148

Query: 328 YQANQVLKQLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMV 387
               QVL+Q  +   A GFF WL+   G++H EHTY +++ + GR +    I K+LD M 
Sbjct: 149 LVVLQVLRQPLEPDAAWGFFQWLKGVEGYRHTEHTYNSLIEVFGRVKDVTGIQKVLDDMS 208

Query: 388 RDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLD 447
             GC  NVV +  +IH Y RA+ ++ A++++ QM  VGC P+ VTY  L+ +  K     
Sbjct: 209 AYGCGMNVVLFTTVIHWYSRADDIDRAVEMWNQMLKVGCLPNVVTYTMLMSLLTKLKRFR 268

Query: 448 VAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMI 507
              +++K M +AG  P+  TY+V+I CL  +G+L AA  +F ++ +    P   T+ +++
Sbjct: 269 QVGEIFKDMVSAGCRPNVRTYTVLIQCLASSGNLDAALLVFEKLDSLKASPTAATFRVLM 328

Query: 508 ALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEM 561
              A A + +    L+  M+ A  +P+   Y  VM+ L   G L EA  +   M
Sbjct: 329 DSAASAGDLELLKGLFEGMKKANQKPNGKMYFTVMDSLKKAGKLTEAAPLLEAM 382



 Score = 92.0 bits (227), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 55/208 (26%), Positives = 104/208 (50%)

Query: 460 GLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSA 519
           G   D+F Y+ +I+ LG+  H     +L  ++ +     ++VT N +I   + + N   A
Sbjct: 497 GYKHDSFVYTKMISLLGRHHHFSQVEELLMKLQSSDIEVSIVTMNSIIFTLSVSHNPDLA 556

Query: 520 LKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDL 579
           +K++  M++   +P+  TY+ V+++L    + D A A++ EM      PD   Y +L+  
Sbjct: 557 MKIFYWMKDLKVKPNTRTYTTVIDMLVKMRHFDRAMAIYQEMLDAGCKPDAHTYTVLIQS 616

Query: 580 WGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPS 639
            G+ G +  A    E M   G +PNV    SL+++ +  G++S A  + + M + G+ P+
Sbjct: 617 LGREGKIDAAEHLLEKMPLNGCKPNVVNYTSLINSLIHYGRVSHALAVFKRMQDEGVMPN 676

Query: 640 LQTYTLLLSCCTEARSPYDMGFCHELMA 667
             TY+L+      A   +D+    + MA
Sbjct: 677 SITYSLMSKGLKRANMLHDLVEVEKKMA 704



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 41/187 (21%), Positives = 81/187 (43%)

Query: 467 TYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDM 526
           TY+ +I   G+   +    ++  +M   GC  N+V +  +I   ++A +   A++++  M
Sbjct: 183 TYNSLIEVFGRVKDVTGIQKVLDDMSAYGCGMNVVLFTTVIHWYSRADDIDRAVEMWNQM 242

Query: 527 QNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNV 586
              G  P+ VTY+++M +L       +   +F +M      P+   Y +L+     +GN+
Sbjct: 243 LKVGCLPNVVTYTMLMSLLTKLKRFRQVGEIFKDMVSAGCRPNVRTYTVLIQCLASSGNL 302

Query: 587 RKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLL 646
             A   +E +      P   T   L+ +    G L     L +GM     KP+ + Y  +
Sbjct: 303 DAALLVFEKLDSLKASPTAATFRVLMDSAASAGDLELLKGLFEGMKKANQKPNGKMYFTV 362

Query: 647 LSCCTEA 653
           +    +A
Sbjct: 363 MDSLKKA 369



 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 46/208 (22%), Positives = 95/208 (45%), Gaps = 6/208 (2%)

Query: 530 GFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKA 589
           G+   + TY+ ++EV G    +   + V  +M       +  ++  ++  + +A ++ +A
Sbjct: 176 GYRHTEHTYNSLIEVFGRVKDVTGIQKVLDDMSAYGCGMNVVLFTTVIHWYSRADDIDRA 235

Query: 590 WEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSC 649
            E +  ML+ G  PNV T   L+S   ++ +      + + M++ G +P+++TYT+L+ C
Sbjct: 236 VEMWNQMLKVGCLPNVVTYTMLMSLLTKLKRFRQVGEIFKDMVSAGCRPNVRTYTVLIQC 295

Query: 650 CTEARSPYDMGFC--HELMAVSGHP-AHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDR 706
              + +  D       +L ++   P A  F + M S    G    + +    E M   ++
Sbjct: 296 LASSGN-LDAALLVFEKLDSLKASPTAATFRVLMDSAASAGD--LELLKGLFEGMKKANQ 352

Query: 707 ESKRGLVDAVVDFLHKSGLKEEAGSVWE 734
           +    +   V+D L K+G   EA  + E
Sbjct: 353 KPNGKMYFTVMDSLKKAGKLTEAAPLLE 380


>gi|356557985|ref|XP_003547290.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16390,
           chloroplastic-like [Glycine max]
          Length = 692

 Score =  161 bits (407), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 110/476 (23%), Positives = 221/476 (46%), Gaps = 47/476 (9%)

Query: 363 YTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQ 422
           Y   + +L  +R F    KL D+M++ G +P+ +T++ L++    +   N+A+++F++M 
Sbjct: 159 YNVTLKVLRESRDFEGAEKLFDEMLQRGVKPDNITFSTLVNCASVSGLPNKAVELFEKMS 218

Query: 423 VVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQ 482
             GCEPD +T   ++  +A+   +D A+++Y + +A   S D  T+S +I     AG+  
Sbjct: 219 GFGCEPDGITCSGMVYAYARTNNVDKAVNLYDRAKAENWSLDAVTFSTLIKMYSMAGNYD 278

Query: 483 AAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVM 542
              +++ EM   G  PN+ TYN ++    +++ ++ A  ++++M++ G  PD +TY+ ++
Sbjct: 279 KCLEVYQEMKVLGVKPNVATYNTLLGAMLRSKKHRQAKAIHKEMKSNGVSPDFITYASLL 338

Query: 543 EV--------------------------------LGHC---GYLDEAEAVFAEMRRKNWV 567
           EV                                L  C   GY D A  +F EM+     
Sbjct: 339 EVYTRAQCSEDALGVYKEMKGNGMDMTADLYNKLLAMCADVGYTDRAVEIFYEMKSSGTC 398

Query: 568 -PDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYH 626
            PD   +  L+ ++ ++G V +       M+Q+G +P +    SL+  + +  +  D   
Sbjct: 399 QPDSWTFSSLITIYSRSGKVSEVEGMLNEMIQSGFQPTIFVMTSLIRCYGKAKRTDDVVK 458

Query: 627 LLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGFCHELMAVSGHPAHMFLLSMPSPGPD 686
           + + +L+LG+ P+      LL+  T+     ++G   + +  +       +  +      
Sbjct: 459 IFKQLLDLGIVPNDHFCCCLLNVLTQTPKE-ELGKLTDCIEKANTKLGTVVRYLVEEQES 517

Query: 687 GQNVRDHVGSFLEMMHSEDRESKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAV 746
            +  R      LE+++S D E K+ L + ++D   K  + E A  + ++     +Y + +
Sbjct: 518 DEGFRKET---LELLNSIDAEVKKPLCNCLIDLCVKLNVPERACGLLDLGLMLEIYKN-I 573

Query: 747 KEKGMSYWLINLHVMSDGTAVIALSRTLAWFR--KQMLISGVG-PSRIDIVTGWGR 799
           + K  + W ++L  +S G A+ AL     W     + L SG   P  + I TG G+
Sbjct: 574 QSKSQTQWSLHLKELSVGAAMTALH---VWINDLSEALESGEDLPPLLGINTGQGK 626



 Score = 56.2 bits (134), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 40/173 (23%), Positives = 81/173 (46%), Gaps = 20/173 (11%)

Query: 276 REMKIPAGLAPFSRHFASTGNVVESVSRILRQWKWGPLAEEALG------NTNYSMDAYQ 329
           +EMK   G++P    F +  +++E  +R          +E+ALG           M A  
Sbjct: 320 KEMK-SNGVSP---DFITYASLLEVYTR-------AQCSEDALGVYKEMKGNGMDMTADL 368

Query: 330 ANQVLKQLQD---HTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQM 386
            N++L    D      A+  F  ++     + D  T+++++ I  R+ +   +  +L++M
Sbjct: 369 YNKLLAMCADVGYTDRAVEIFYEMKSSGTCQPDSWTFSSLITIYSRSGKVSEVEGMLNEM 428

Query: 387 VRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDI 439
           ++ G QP +     LI  YG+A   ++ + +FKQ+  +G  P+    C L+++
Sbjct: 429 IQSGFQPTIFVMTSLIRCYGKAKRTDDVVKIFKQLLDLGIVPNDHFCCCLLNV 481


>gi|15218325|ref|NP_172461.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|122215618|sp|Q3EDF8.1|PPR28_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g09900
 gi|332190391|gb|AEE28512.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 598

 Score =  161 bits (407), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 110/434 (25%), Positives = 210/434 (48%), Gaps = 15/434 (3%)

Query: 320 NTNYSMDAYQANQVLKQLQDHTVALGFFNWLRRQA--GFKHDEHTYTTMVGILGRARQFG 377
           N++++++  ++N  L+Q+         F +L      G   D    TT++    R  +  
Sbjct: 95  NSSFALEDVESNNHLRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTR 154

Query: 378 AINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLI 437
              K+L+ +   G  P+V+TYN +I  Y +A  +N AL V  +M V    PD VTY T++
Sbjct: 155 KAAKILEILEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRMSV---SPDVVTYNTIL 211

Query: 438 DIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCI 497
                +G L  AM++  +M      PD  TY+++I    +   +  A +L  EM ++GC 
Sbjct: 212 RSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCT 271

Query: 498 PNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAV 557
           P++VTYN+++    K      A+K   DM ++G +P+ +T++I++  +   G   +AE +
Sbjct: 272 PDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKL 331

Query: 558 FAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLR 617
            A+M RK + P    + +L++   + G + +A +  E M Q G +PN  + N LL  F +
Sbjct: 332 LADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCK 391

Query: 618 VGQLSDAYHLLQGMLNLGLKPSLQTY-TLLLSCCTEARSPYDMGFCHELMAVSGHPA--- 673
             ++  A   L+ M++ G  P + TY T+L + C + +    +   ++L +    P    
Sbjct: 392 EKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLIT 451

Query: 674 -HMFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRESKRGLVDAVVDFLHKSGLKEEAGSV 732
            +  +  +   G  G+ ++      L+ M ++D +       ++V  L + G  +EA   
Sbjct: 452 YNTVIDGLAKAGKTGKAIK-----LLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKF 506

Query: 733 WEVAAQKNVYPDAV 746
           +    +  + P+AV
Sbjct: 507 FHEFERMGIRPNAV 520



 Score =  154 bits (388), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 103/371 (27%), Positives = 167/371 (45%), Gaps = 37/371 (9%)

Query: 314 AEEALGNTNYSMDAYQANQVLKQLQDHTVALGFFNWLRR--QAGFKHDEHTYTTMVGILG 371
           A   L   + S D    N +L+ L D          L R  Q     D  TYT ++    
Sbjct: 191 ALSVLDRMSVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATC 250

Query: 372 RARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRV 431
           R    G   KLLD+M   GC P+VVTYN L++   +   L+EA+     M   GC+P+ +
Sbjct: 251 RDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVI 310

Query: 432 TY-------CT----------------------------LIDIHAKAGFLDVAMDMYKKM 456
           T+       C+                            LI+   + G L  A+D+ +KM
Sbjct: 311 THNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKM 370

Query: 457 QAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNY 516
              G  P++ +Y+ +++   K   +  A +    MV++GC P++VTYN M+    K    
Sbjct: 371 PQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKV 430

Query: 517 QSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLL 576
           + A+++   + + G  P  +TY+ V++ L   G   +A  +  EMR K+  PD   Y  L
Sbjct: 431 EDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSL 490

Query: 577 VDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGL 636
           V    + G V +A +++    + G+RPN  T NS++    +  Q   A   L  M+N G 
Sbjct: 491 VGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGC 550

Query: 637 KPSLQTYTLLL 647
           KP+  +YT+L+
Sbjct: 551 KPNETSYTILI 561



 Score =  137 bits (344), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 79/256 (30%), Positives = 133/256 (51%)

Query: 381 KLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIH 440
           KLL  M+R G  P+VVT+N LI+   R   L  A+D+ ++M   GC+P+ ++Y  L+   
Sbjct: 330 KLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGF 389

Query: 441 AKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNL 500
            K   +D A++  ++M + G  PD  TY+ ++  L K G ++ A ++  ++ ++GC P L
Sbjct: 390 CKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVL 449

Query: 501 VTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAE 560
           +TYN +I   AKA     A+KL  +M+    +PD +TYS ++  L   G +DEA   F E
Sbjct: 450 ITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHE 509

Query: 561 MRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQ 620
             R    P+   +  ++    K+    +A ++   M+  G +PN  +   L+      G 
Sbjct: 510 FERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGM 569

Query: 621 LSDAYHLLQGMLNLGL 636
             +A  LL  + N GL
Sbjct: 570 AKEALELLNELCNKGL 585



 Score =  124 bits (312), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 69/254 (27%), Positives = 127/254 (50%), Gaps = 2/254 (0%)

Query: 348 NWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGR 407
           + LR+  GF     T+  ++  L R    G    +L++M + GCQPN ++YN L+H + +
Sbjct: 334 DMLRK--GFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCK 391

Query: 408 ANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFT 467
              ++ A++  ++M   GC PD VTY T++    K G ++ A+++  ++ + G SP   T
Sbjct: 392 EKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLIT 451

Query: 468 YSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQ 527
           Y+ +I+ L KAG    A +L  EM  +   P+ +TY+ ++   ++      A+K + + +
Sbjct: 452 YNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFE 511

Query: 528 NAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVR 587
             G  P+ VT++ +M  L      D A      M  +   P+E  Y +L++     G  +
Sbjct: 512 RMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAK 571

Query: 588 KAWEWYEAMLQAGL 601
           +A E    +   GL
Sbjct: 572 EALELLNELCNKGL 585


>gi|18394846|ref|NP_564110.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75174883|sp|Q9LN22.1|PPR54_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g20300, mitochondrial; Flags: Precursor
 gi|9558596|gb|AAF88159.1|AC026234_10 Contains similarity to a hypothetical protein T3P18.15 gi|5454201
           from Arabidopsis thaliana BAC T3P18 gb|AC005698 and
           contains multiple PPR PF|01535 repeats [Arabidopsis
           thaliana]
 gi|17386104|gb|AAL38598.1|AF446865_1 At1g20300/F14O10_8 [Arabidopsis thaliana]
 gi|15450347|gb|AAK96467.1| At1g20300/F14O10_8 [Arabidopsis thaliana]
 gi|332191838|gb|AEE29959.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 537

 Score =  161 bits (407), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 94/343 (27%), Positives = 161/343 (46%), Gaps = 39/343 (11%)

Query: 343 ALGFFNWLRRQAGFKHDE-HTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRL 401
           +L FFNW   +  + H   H Y  M+ + G+ RQF     L+D M     + ++ T+  L
Sbjct: 133 SLAFFNWATSRDDYDHKSPHPYNEMIDLSGKVRQFDLAWHLIDLMKSRNVEISIETFTIL 192

Query: 402 IHSYGRANYLNEALDVFKQMQVVGC----------------------------------E 427
           I  Y RA   +EA+  F +M+  GC                                  E
Sbjct: 193 IRRYVRAGLASEAVHCFNRMEDYGCVPDKIAFSIVISNLSRKRRASEAQSFFDSLKDRFE 252

Query: 428 PDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQL 487
           PD + Y  L+    +AG +  A  ++K+M+ AG+ P+ +TYS++I+ L + G +  AH +
Sbjct: 253 PDVIVYTNLVRGWCRAGEISEAEKVFKEMKLAGIEPNVYTYSIVIDALCRCGQISRAHDV 312

Query: 488 FCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGH 547
           F +M++ GC PN +T+N ++ +  KA   +  L++Y  M+  G EPD +TY+ ++E   H
Sbjct: 313 FADMLDSGCAPNAITFNNLMRVHVKAGRTEKVLQVYNQMKKLGCEPDTITYNFLIE--AH 370

Query: 548 C--GYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNV 605
           C    L+ A  V   M +K    +   +  +     K  +V  A   Y  M++A   PN 
Sbjct: 371 CRDENLENAVKVLNTMIKKKCEVNASTFNTIFRYIEKKRDVNGAHRMYSKMMEAKCEPNT 430

Query: 606 PTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
            T N L+  F+          + + M +  ++P++ TY LL++
Sbjct: 431 VTYNILMRMFVGSKSTDMVLKMKKEMDDKEVEPNVNTYRLLVT 473



 Score =  143 bits (361), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 97/350 (27%), Positives = 172/350 (49%), Gaps = 14/350 (4%)

Query: 298 VESVSRILRQWKWGPLAEEALGNTNYSMDAYQA--NQV--------LKQLQDHTVALGFF 347
           +E+ + ++R++    LA EA+   N  M+ Y    +++        L + +  + A  FF
Sbjct: 186 IETFTILIRRYVRAGLASEAVHCFN-RMEDYGCVPDKIAFSIVISNLSRKRRASEAQSFF 244

Query: 348 NWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGR 407
           + L+ +  F+ D   YT +V    RA +     K+  +M   G +PNV TY+ +I +  R
Sbjct: 245 DSLKDR--FEPDVIVYTNLVRGWCRAGEISEAEKVFKEMKLAGIEPNVYTYSIVIDALCR 302

Query: 408 ANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFT 467
              ++ A DVF  M   GC P+ +T+  L+ +H KAG  +  + +Y +M+  G  PDT T
Sbjct: 303 CGQISRAHDVFADMLDSGCAPNAITFNNLMRVHVKAGRTEKVLQVYNQMKKLGCEPDTIT 362

Query: 468 YSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQ 527
           Y+ +I    +  +L+ A ++   M+ + C  N  T+N +     K R+   A ++Y  M 
Sbjct: 363 YNFLIEAHCRDENLENAVKVLNTMIKKKCEVNASTFNTIFRYIEKKRDVNGAHRMYSKMM 422

Query: 528 NAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVR 587
            A  EP+ VTY+I+M +       D    +  EM  K   P+   Y LLV ++   G+  
Sbjct: 423 EAKCEPNTVTYNILMRMFVGSKSTDMVLKMKKEMDDKEVEPNVNTYRLLVTMFCGMGHWN 482

Query: 588 KAWEWYEAMLQAG-LRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGL 636
            A++ ++ M++   L P++     +L+   R GQL     L++ M+  GL
Sbjct: 483 NAYKLFKEMVEEKCLTPSLSLYEMVLAQLRRAGQLKKHEELVEKMIQKGL 532



 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 34/137 (24%), Positives = 69/137 (50%), Gaps = 1/137 (0%)

Query: 362 TYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQM 421
           T+ T+   + + R     +++  +M+   C+PN VTYN L+  +  +   +  L + K+M
Sbjct: 397 TFNTIFRYIEKKRDVNGAHRMYSKMMEAKCEPNTVTYNILMRMFVGSKSTDMVLKMKKEM 456

Query: 422 QVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKM-QAAGLSPDTFTYSVIINCLGKAGH 480
                EP+  TY  L+ +    G  + A  ++K+M +   L+P    Y +++  L +AG 
Sbjct: 457 DDKEVEPNVNTYRLLVTMFCGMGHWNNAYKLFKEMVEEKCLTPSLSLYEMVLAQLRRAGQ 516

Query: 481 LQAAHQLFCEMVNQGCI 497
           L+   +L  +M+ +G +
Sbjct: 517 LKKHEELVEKMIQKGLV 533


>gi|224054827|ref|XP_002298371.1| predicted protein [Populus trichocarpa]
 gi|222845629|gb|EEE83176.1| predicted protein [Populus trichocarpa]
          Length = 915

 Score =  161 bits (407), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 119/459 (25%), Positives = 211/459 (45%), Gaps = 13/459 (2%)

Query: 334 LKQLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQP 393
           L ++Q+  V  G  + +  + GF   E   +++V  L R  +      L++++ + G  P
Sbjct: 306 LCKVQEFEVGAGVMDEMI-ELGFVPTEAALSSLVEGLRRKGKVVDAFDLVNRVKKVGAMP 364

Query: 394 NVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMY 453
           ++  YN LI+S  +    +EA  +FK+M   G   + VTY  LID   + G LD A+   
Sbjct: 365 SLFVYNALINSLCKDGKFDEAELLFKEMGEKGLCANDVTYSILIDSFCRRGKLDTAIHFL 424

Query: 454 KKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKA 513
            KM  AG+    + Y+ +IN   K G+L AA   F EM+++G  P +V+Y  +I+     
Sbjct: 425 GKMIMAGIKITVYPYNSLINGHCKLGNLSAAVSFFDEMIDKGLKPTVVSYTSLISGYCNK 484

Query: 514 RNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVY 573
                A +LY +M   G  P+  T++ ++  L     + +A  +F EM  +N +P+E  Y
Sbjct: 485 GKLHEAFRLYHEMTGKGIAPNTYTFTTLISALFRANRMTDAFRLFDEMLEQNMMPNEVTY 544

Query: 574 GLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLN 633
            ++++   K GN  KA+E    M+Q GL P+  T   L+S+    G++ +A   +  +  
Sbjct: 545 NVMIEGHCKEGNTVKAFELLNQMVQKGLVPDTYTYRPLISSLCSTGRVCEAKKFIDDLHR 604

Query: 634 LGLKPSLQTYTLLL-SCCTEARSPYDMGFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRD 692
              K +   Y+ LL   C E R    +G C E M   G    +   ++   G   +    
Sbjct: 605 EHFKLNEMCYSALLHGYCKEGRLRDALGVCRE-MVKRGVDMDLVCYAVLIDGTIKEQDTS 663

Query: 693 HVGSFLEMMHSEDRESKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAVKEKGMS 752
            V   L+ MH +     + +  +++D   K+G  ++A  +W++   +   P+ V    + 
Sbjct: 664 AVFGLLKNMHDQRLRPDKVIYTSMIDGYSKAGSVKKAFGIWDIMIDEGCTPNIVTYTTLI 723

Query: 753 YWLINLHVMSDGTAVIALSRTLAWFRKQMLISGVGPSRI 791
             L    +M            L W  K+ML+S   P+ +
Sbjct: 724 NELCKAGLMDKA--------ELLW--KEMLVSNSTPNHV 752



 Score =  129 bits (324), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 86/299 (28%), Positives = 142/299 (47%), Gaps = 2/299 (0%)

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
           Q G   D +TY  ++  L    +     K +D + R+  + N + Y+ L+H Y +   L 
Sbjct: 569 QKGLVPDTYTYRPLISSLCSTGRVCEAKKFIDDLHREHFKLNEMCYSALLHGYCKEGRLR 628

Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
           +AL V ++M   G + D V Y  LID   K         + K M    L PD   Y+ +I
Sbjct: 629 DALGVCREMVKRGVDMDLVCYAVLIDGTIKEQDTSAVFGLLKNMHDQRLRPDKVIYTSMI 688

Query: 473 NCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFE 532
           +   KAG ++ A  ++  M+++GC PN+VTY  +I    KA     A  L+++M  +   
Sbjct: 689 DGYSKAGSVKKAFGIWDIMIDEGCTPNIVTYTTLINELCKAGLMDKAELLWKEMLVSNST 748

Query: 533 PDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEW 592
           P+ VTY   ++ L   G +++A  +  +M  K  + +   Y +LV  + K G V +A + 
Sbjct: 749 PNHVTYCCFLDHLAREGSMEKAVQLHNDM-LKGLLANTVSYNILVRGFCKLGRVEEATKL 807

Query: 593 YEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL-SCC 650
            + M+   + P+  T ++++    R G L  A      MLN GLKP    Y  L+  CC
Sbjct: 808 LDEMIDNAIFPDCITYSTIIYQCCRRGNLDGAIEFWDTMLNKGLKPDTLAYNFLIYGCC 866



 Score =  122 bits (306), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 91/332 (27%), Positives = 151/332 (45%), Gaps = 37/332 (11%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           G   + +T+TT++  L RA +     +L D+M+     PN VTYN +I  + +     +A
Sbjct: 501 GIAPNTYTFTTLISALFRANRMTDAFRLFDEMLEQNMMPNEVTYNVMIEGHCKEGNTVKA 560

Query: 415 LDVFKQMQVVGCEPDRVTYCTLI-----------------DIH----------------- 440
            ++  QM   G  PD  TY  LI                 D+H                 
Sbjct: 561 FELLNQMVQKGLVPDTYTYRPLISSLCSTGRVCEAKKFIDDLHREHFKLNEMCYSALLHG 620

Query: 441 -AKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPN 499
             K G L  A+ + ++M   G+  D   Y+V+I+   K     A   L   M +Q   P+
Sbjct: 621 YCKEGRLRDALGVCREMVKRGVDMDLVCYAVLIDGTIKEQDTSAVFGLLKNMHDQRLRPD 680

Query: 500 LVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFA 559
            V Y  MI   +KA + + A  ++  M + G  P+ VTY+ ++  L   G +D+AE ++ 
Sbjct: 681 KVIYTSMIDGYSKAGSVKKAFGIWDIMIDEGCTPNIVTYTTLINELCKAGLMDKAELLWK 740

Query: 560 EMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVG 619
           EM   N  P+   Y   +D   + G++ KA + +  ML+ GL  N  + N L+  F ++G
Sbjct: 741 EMLVSNSTPNHVTYCCFLDHLAREGSMEKAVQLHNDMLK-GLLANTVSYNILVRGFCKLG 799

Query: 620 QLSDAYHLLQGMLNLGLKPSLQTY-TLLLSCC 650
           ++ +A  LL  M++  + P   TY T++  CC
Sbjct: 800 RVEEATKLLDEMIDNAIFPDCITYSTIIYQCC 831



 Score =  119 bits (298), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 76/236 (32%), Positives = 122/236 (51%), Gaps = 5/236 (2%)

Query: 376 FGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCT 435
           FG +  + DQ +R    P+ V Y  +I  Y +A  + +A  ++  M   GC P+ VTY T
Sbjct: 666 FGLLKNMHDQRLR----PDKVIYTSMIDGYSKAGSVKKAFGIWDIMIDEGCTPNIVTYTT 721

Query: 436 LIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQG 495
           LI+   KAG +D A  ++K+M  +  +P+  TY   ++ L + G ++ A QL  +M+ +G
Sbjct: 722 LINELCKAGLMDKAELLWKEMLVSNSTPNHVTYCCFLDHLAREGSMEKAVQLHNDML-KG 780

Query: 496 CIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAE 555
            + N V+YNI++    K    + A KL  +M +    PD +TYS ++      G LD A 
Sbjct: 781 LLANTVSYNILVRGFCKLGRVEEATKLLDEMIDNAIFPDCITYSTIIYQCCRRGNLDGAI 840

Query: 556 AVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSL 611
             +  M  K   PD   Y  L+     AG + KA+E  + M++ G++PN  T  SL
Sbjct: 841 EFWDTMLNKGLKPDTLAYNFLIYGCCIAGELGKAFELRDDMIRRGVKPNQATHKSL 896



 Score =  115 bits (287), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 86/331 (25%), Positives = 139/331 (41%), Gaps = 41/331 (12%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           G + D + Y  ++      + F    +++ +M  +    NVV YN LIH   +   + EA
Sbjct: 223 GIRPDIYIYVAVIRSFCELKNFAKAKEMIQRM--ESSDLNVVVYNVLIHGLCKNKRVWEA 280

Query: 415 LDVFKQMQVVGCEPDRVTYCTLI-------DIHAKAGFLDV------------------- 448
           +++   +   G     VTYCTL+       +    AG +D                    
Sbjct: 281 VEIKNGLIQKGLTASEVTYCTLVLGLCKVQEFEVGAGVMDEMIELGFVPTEAALSSLVEG 340

Query: 449 ---------AMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPN 499
                    A D+  +++  G  P  F Y+ +IN L K G    A  LF EM  +G   N
Sbjct: 341 LRRKGKVVDAFDLVNRVKKVGAMPSLFVYNALINSLCKDGKFDEAELLFKEMGEKGLCAN 400

Query: 500 LVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHC--GYLDEAEAV 557
            VTY+I+I    +     +A+     M  AG +     Y+ ++   GHC  G L  A + 
Sbjct: 401 DVTYSILIDSFCRRGKLDTAIHFLGKMIMAGIKITVYPYNSLIN--GHCKLGNLSAAVSF 458

Query: 558 FAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLR 617
           F EM  K   P    Y  L+  +   G + +A+  Y  M   G+ PN  T  +L+SA  R
Sbjct: 459 FDEMIDKGLKPTVVSYTSLISGYCNKGKLHEAFRLYHEMTGKGIAPNTYTFTTLISALFR 518

Query: 618 VGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
             +++DA+ L   ML   + P+  TY +++ 
Sbjct: 519 ANRMTDAFRLFDEMLEQNMMPNEVTYNVMIE 549



 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 74/325 (22%), Positives = 143/325 (44%), Gaps = 24/325 (7%)

Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQ-MVRDGCQPNVVT---- 397
           AL FFN+L     F H   ++  ++  L  A  F   + LL   ++R G  P  V     
Sbjct: 88  ALRFFNFLGLHKNFNHSTMSFCILIHALVNANLFWPASSLLQTLLLRGGLDPREVFEALL 147

Query: 398 -------------YNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAG 444
                        ++ LI SY +   + +++ +F+ M+     P   T   +++  AK  
Sbjct: 148 DCFEKCDFISSLGFDLLIQSYVQEKRMFDSVLIFRLMRQCELMPQVRTLGEVLNGLAKIR 207

Query: 445 FLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYN 504
            +D+ + ++ ++ + G+ PD + Y  +I    +  +   A ++   M +     N+V YN
Sbjct: 208 RVDMVLVLFGEILSMGIRPDIYIYVAVIRSFCELKNFAKAKEMIQRMESSDL--NVVVYN 265

Query: 505 IMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGY--LDEAEAVFAEMR 562
           ++I    K +    A+++   +   G    +VTY  +  VLG C     +    V  EM 
Sbjct: 266 VLIHGLCKNKRVWEAVEIKNGLIQKGLTASEVTYCTL--VLGLCKVQEFEVGAGVMDEMI 323

Query: 563 RKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLS 622
              +VP E     LV+   + G V  A++    + + G  P++   N+L+++  + G+  
Sbjct: 324 ELGFVPTEAALSSLVEGLRRKGKVVDAFDLVNRVKKVGAMPSLFVYNALINSLCKDGKFD 383

Query: 623 DAYHLLQGMLNLGLKPSLQTYTLLL 647
           +A  L + M   GL  +  TY++L+
Sbjct: 384 EAELLFKEMGEKGLCANDVTYSILI 408



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 43/142 (30%), Positives = 68/142 (47%), Gaps = 1/142 (0%)

Query: 362 TYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQM 421
           TY   +  L R        +L + M++ G   N V+YN L+  + +   + EA  +  +M
Sbjct: 753 TYCCFLDHLAREGSMEKAVQLHNDMLK-GLLANTVSYNILVRGFCKLGRVEEATKLLDEM 811

Query: 422 QVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHL 481
                 PD +TY T+I    + G LD A++ +  M   GL PDT  Y+ +I     AG L
Sbjct: 812 IDNAIFPDCITYSTIIYQCCRRGNLDGAIEFWDTMLNKGLKPDTLAYNFLIYGCCIAGEL 871

Query: 482 QAAHQLFCEMVNQGCIPNLVTY 503
             A +L  +M+ +G  PN  T+
Sbjct: 872 GKAFELRDDMIRRGVKPNQATH 893


>gi|449436321|ref|XP_004135941.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g53170-like [Cucumis sativus]
 gi|449514880|ref|XP_004164505.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g53170-like [Cucumis sativus]
          Length = 477

 Score =  161 bits (407), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 90/321 (28%), Positives = 165/321 (51%), Gaps = 2/321 (0%)

Query: 342 VALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRL 401
            AL  F  LR+Q  ++    TYT ++ +LG+ +Q    + L + M  +G +P++  Y  L
Sbjct: 109 TALKIFGLLRQQQWYEPRCQTYTKLLMLLGKCKQPEQASLLFEIMFSEGLKPSIDVYTAL 168

Query: 402 IHSYGRANYLNEALDVFKQMQVVG-CEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAG 460
           + +YG++  L++A+    +M+ +  C+PD  TY  LID   +    D+   +   M   G
Sbjct: 169 VSAYGQSGLLHKAISTVDEMKSISDCKPDVHTYSILIDCCTRLRRFDLLKKILADMSCLG 228

Query: 461 LSPDTFTYSVIINCLGKAGHLQAAHQLFCEMV-NQGCIPNLVTYNIMIALQAKARNYQSA 519
           ++ +T TY+ IIN  GKA   +    L  EM+ +  C P+L+T+N  I     +   +  
Sbjct: 229 ITCNTVTYNTIINGFGKAKMFEQMESLLLEMIESDSCPPDLITFNTFIRAYGNSEQIEKM 288

Query: 520 LKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDL 579
            K Y++ Q  G EPD  TY+ ++   G  G  D+ ++V   M ++ + P       ++D 
Sbjct: 289 EKWYKEFQLMGIEPDIWTYNSMISSYGKAGMYDKMKSVLNFMEKRFFSPTIVTMNTIIDS 348

Query: 580 WGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPS 639
           +G+AGN+ +  E+++ M   G++PN  T  SL++A+ + G L     +L+ + N  + P 
Sbjct: 349 FGRAGNIEEMEEYFKNMKFQGMKPNSVTYCSLVNAYGKSGDLEKVDSILRQIENSDVVPD 408

Query: 640 LQTYTLLLSCCTEARSPYDMG 660
              +  L++   +A +   MG
Sbjct: 409 TPLFNCLINVYGQAGNVRKMG 429



 Score =  144 bits (362), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 78/272 (28%), Positives = 140/272 (51%), Gaps = 1/272 (0%)

Query: 357 KHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALD 416
           K D HTY+ ++    R R+F  + K+L  M   G   N VTYN +I+ +G+A    +   
Sbjct: 195 KPDVHTYSILIDCCTRLRRFDLLKKILADMSCLGITCNTVTYNTIINGFGKAKMFEQMES 254

Query: 417 VFKQM-QVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCL 475
           +  +M +   C PD +T+ T I  +  +  ++     YK+ Q  G+ PD +TY+ +I+  
Sbjct: 255 LLLEMIESDSCPPDLITFNTFIRAYGNSEQIEKMEKWYKEFQLMGIEPDIWTYNSMISSY 314

Query: 476 GKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDK 535
           GKAG       +   M  +   P +VT N +I    +A N +   + +++M+  G +P+ 
Sbjct: 315 GKAGMYDKMKSVLNFMEKRFFSPTIVTMNTIIDSFGRAGNIEEMEEYFKNMKFQGMKPNS 374

Query: 536 VTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEA 595
           VTY  ++   G  G L++ +++  ++   + VPD P++  L++++G+AGNVRK  E +  
Sbjct: 375 VTYCSLVNAYGKSGDLEKVDSILRQIENSDVVPDTPLFNCLINVYGQAGNVRKMGELFLE 434

Query: 596 MLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHL 627
           M +    P+  T  +++ A    G   DA  L
Sbjct: 435 MKENKCVPDGITFATMIRALKAQGMTEDAQRL 466



 Score =  107 bits (267), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 52/160 (32%), Positives = 96/160 (60%), Gaps = 1/160 (0%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           G + D  TY +M+   G+A  +  +  +L+ M +    P +VT N +I S+GRA  + E 
Sbjct: 299 GIEPDIWTYNSMISSYGKAGMYDKMKSVLNFMEKRFFSPTIVTMNTIIDSFGRAGNIEEM 358

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
            + FK M+  G +P+ VTYC+L++ + K+G L+    + ++++ + + PDT  ++ +IN 
Sbjct: 359 EEYFKNMKFQGMKPNSVTYCSLVNAYGKSGDLEKVDSILRQIENSDVVPDTPLFNCLINV 418

Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMI-ALQAKA 513
            G+AG+++   +LF EM    C+P+ +T+  MI AL+A+ 
Sbjct: 419 YGQAGNVRKMGELFLEMKENKCVPDGITFATMIRALKAQG 458



 Score = 50.4 bits (119), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 29/114 (25%), Positives = 57/114 (50%), Gaps = 1/114 (0%)

Query: 346 FFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSY 405
           +F  ++ Q G K +  TY ++V   G++     ++ +L Q+      P+   +N LI+ Y
Sbjct: 361 YFKNMKFQ-GMKPNSVTYCSLVNAYGKSGDLEKVDSILRQIENSDVVPDTPLFNCLINVY 419

Query: 406 GRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAA 459
           G+A  + +  ++F +M+   C PD +T+ T+I      G  + A  +  K+ A 
Sbjct: 420 GQAGNVRKMGELFLEMKENKCVPDGITFATMIRALKAQGMTEDAQRLENKLIAT 473


>gi|414887035|tpg|DAA63049.1| TPA: crs2 associated factor1 [Zea mays]
          Length = 668

 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 96/318 (30%), Positives = 154/318 (48%)

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
           Q G   DE TY+ +V    RA ++ +   LL +M  DG +P+   ++R++  +       
Sbjct: 327 QCGVAPDEATYSLLVDAYTRAGRWESARILLKEMEADGVKPSSYVFSRILAGFRDRGDWQ 386

Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
           +A  V ++MQ  G  PDR  Y  +ID   K   L  AMD + KM+  G+ PD  T++ +I
Sbjct: 387 KAFAVLREMQASGVRPDRHFYNVMIDTFGKYNCLGHAMDAFNKMREEGIEPDVVTWNTLI 446

Query: 473 NCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFE 532
           +   K G    A +LF EM    C P   TYNIMI L  +  +++    +  +M+  G  
Sbjct: 447 DAHCKGGRHDRAAELFEEMRESNCPPGTTTYNIMINLLGEQEHWEGVEAMLSEMKEQGLV 506

Query: 533 PDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEW 592
           P+ +TY+ +++V G  G   EA      M+     P   +Y  LV+ + + G    A   
Sbjct: 507 PNIITYTTLVDVYGRSGRYKEAIDCIEAMKADGLKPSPTMYHALVNAYAQRGLADHALNV 566

Query: 593 YEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTE 652
            +AM   GL  ++   NSL++AF    ++ +A+ +LQ M   GL+P + TYT L+     
Sbjct: 567 VKAMKADGLEVSILVLNSLINAFGEDRRVVEAFSVLQFMRENGLRPDVITYTTLMKALIR 626

Query: 653 ARSPYDMGFCHELMAVSG 670
                 +   +E M  SG
Sbjct: 627 VEQFDKVPVIYEEMITSG 644



 Score =  137 bits (346), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 111/443 (25%), Positives = 186/443 (41%), Gaps = 58/443 (13%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDG-CQPNVVTYNRLIHSYGRANYLNE 413
           G     +  T ++  LG A +      L  +    G  +P    YN L+  Y R   L  
Sbjct: 258 GLTPRSNAVTALISALGTAGRVAEAEALFLEFFLAGEIKPRTRAYNALLKGYVRIASLKN 317

Query: 414 ALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIIN 473
           A  V  +M   G  PD  TY  L+D + +AG  + A  + K+M+A G+ P ++ +S I+ 
Sbjct: 318 AEQVLDEMSQCGVAPDEATYSLLVDAYTRAGRWESARILLKEMEADGVKPSSYVFSRILA 377

Query: 474 CLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEP 533
                G  Q A  +  EM   G  P+   YN+MI    K      A+  +  M+  G EP
Sbjct: 378 GFRDRGDWQKAFAVLREMQASGVRPDRHFYNVMIDTFGKYNCLGHAMDAFNKMREEGIEP 437

Query: 534 DKVTYSIVMEVLGHC--GYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWE 591
           D VT++ +++   HC  G  D A  +F EMR  N  P    Y ++++L G+    ++ WE
Sbjct: 438 DVVTWNTLID--AHCKGGRHDRAAELFEEMRESNCPPGTTTYNIMINLLGE----QEHWE 491

Query: 592 WYEAML----QAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
             EAML    + GL PN+ T  +L+  + R G+  +A   ++ M   GLKPS   Y  L+
Sbjct: 492 GVEAMLSEMKEQGLVPNIITYTTLVDVYGRSGRYKEAIDCIEAMKADGLKPSPTMYHALV 551

Query: 648 SCCTEARSPYDMGFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRE 707
           +   +                                   + + DH  + ++ M ++  E
Sbjct: 552 NAYAQ-----------------------------------RGLADHALNVVKAMKADGLE 576

Query: 708 SKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAVKEKGMSYWLINLHVMSDGTAV 767
               +++++++   +     EA SV +   +  + PD +    +   LI +    D   V
Sbjct: 577 VSILVLNSLINAFGEDRRVVEAFSVLQFMRENGLRPDVITYTTLMKALIRVEQF-DKVPV 635

Query: 768 IALSRTLAWFRKQMLISGVGPSR 790
           I          ++M+ SG  P R
Sbjct: 636 I---------YEEMITSGCAPDR 649



 Score =  103 bits (258), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 83/370 (22%), Positives = 163/370 (44%), Gaps = 18/370 (4%)

Query: 237 VQPRSKAHSNRLNSNFKSNLQPSDAKVVECVSERFSKPSREMKIPAGLAPFSRHFASTGN 296
           ++PR++A+    N+  K  ++ +  K  E V +  S+         G+AP     A+   
Sbjct: 295 IKPRTRAY----NALLKGYVRIASLKNAEQVLDEMSQ--------CGVAPDE---ATYSL 339

Query: 297 VVESVSRILRQWKWGPLAEEALGNTNYSMDAYQANQVLKQLQDHTVALGFFNWLR--RQA 354
           +V++ +R  R W+   +  + +        +Y  +++L   +D       F  LR  + +
Sbjct: 340 LVDAYTRAGR-WESARILLKEMEADGVKPSSYVFSRILAGFRDRGDWQKAFAVLREMQAS 398

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           G + D H Y  M+   G+    G      ++M  +G +P+VVT+N LI ++ +    + A
Sbjct: 399 GVRPDRHFYNVMIDTFGKYNCLGHAMDAFNKMREEGIEPDVVTWNTLIDAHCKGGRHDRA 458

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
            ++F++M+   C P   TY  +I++  +    +    M  +M+  GL P+  TY+ +++ 
Sbjct: 459 AELFEEMRESNCPPGTTTYNIMINLLGEQEHWEGVEAMLSEMKEQGLVPNIITYTTLVDV 518

Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPD 534
            G++G  + A      M   G  P+   Y+ ++   A+      AL + + M+  G E  
Sbjct: 519 YGRSGRYKEAIDCIEAMKADGLKPSPTMYHALVNAYAQRGLADHALNVVKAMKADGLEVS 578

Query: 535 KVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYE 594
            +  + ++   G    + EA +V   MR     PD   Y  L+    +     K    YE
Sbjct: 579 ILVLNSLINAFGEDRRVVEAFSVLQFMRENGLRPDVITYTTLMKALIRVEQFDKVPVIYE 638

Query: 595 AMLQAGLRPN 604
            M+ +G  P+
Sbjct: 639 EMITSGCAPD 648



 Score = 96.3 bits (238), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 74/314 (23%), Positives = 132/314 (42%), Gaps = 45/314 (14%)

Query: 381 KLLDQMVRDGCQPNVVTYNRLIHSY------GRANYLNEALDVFKQMQVVGCEPDRVTYC 434
           +LL  +      P++ +Y+ L+ S         A  L   L   ++ ++   EPD   + 
Sbjct: 176 RLLSLLREHDFLPDLASYSHLLASLLNTRDPPDAALLERLLGDLRESRL---EPDAPLFS 232

Query: 435 TLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFC----- 489
            LI   A+A   D A+++    QA GL+P +   + +I+ LG AG +  A  LF      
Sbjct: 233 DLISAFARAALPDAALELLASAQAIGLTPRSNAVTALISALGTAGRVAEAEALFLEFFLA 292

Query: 490 -------------------------------EMVNQGCIPNLVTYNIMIALQAKARNYQS 518
                                          EM   G  P+  TY++++    +A  ++S
Sbjct: 293 GEIKPRTRAYNALLKGYVRIASLKNAEQVLDEMSQCGVAPDEATYSLLVDAYTRAGRWES 352

Query: 519 ALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVD 578
           A  L ++M+  G +P    +S ++      G   +A AV  EM+     PD   Y +++D
Sbjct: 353 ARILLKEMEADGVKPSSYVFSRILAGFRDRGDWQKAFAVLREMQASGVRPDRHFYNVMID 412

Query: 579 LWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKP 638
            +GK   +  A + +  M + G+ P+V T N+L+ A  + G+   A  L + M      P
Sbjct: 413 TFGKYNCLGHAMDAFNKMREEGIEPDVVTWNTLIDAHCKGGRHDRAAELFEEMRESNCPP 472

Query: 639 SLQTYTLLLSCCTE 652
              TY ++++   E
Sbjct: 473 GTTTYNIMINLLGE 486



 Score = 53.5 bits (127), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 37/168 (22%), Positives = 71/168 (42%), Gaps = 35/168 (20%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           ++ G   +  TYTT+V + GR+ ++      ++ M  DG +P+   Y+ L+++Y +    
Sbjct: 501 KEQGLVPNIITYTTLVDVYGRSGRYKEAIDCIEAMKADGLKPSPTMYHALVNAYAQRGLA 560

Query: 412 NEALDVFKQMQVVGCE-----------------------------------PDRVTYCTL 436
           + AL+V K M+  G E                                   PD +TY TL
Sbjct: 561 DHALNVVKAMKADGLEVSILVLNSLINAFGEDRRVVEAFSVLQFMRENGLRPDVITYTTL 620

Query: 437 IDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAA 484
           +    +    D    +Y++M  +G +PD    +++ + L    H++ A
Sbjct: 621 MKALIRVEQFDKVPVIYEEMITSGCAPDRKARAMLRSGLKYIKHMRVA 668



 Score = 43.1 bits (100), Expect = 0.59,   Method: Compositional matrix adjust.
 Identities = 41/173 (23%), Positives = 68/173 (39%), Gaps = 39/173 (22%)

Query: 520 LKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEA---EAVFAEMRRKNWVPDEPVY--- 573
           L+L   ++   F PD  +YS ++  L +     +A   E +  ++R     PD P++   
Sbjct: 175 LRLLSLLREHDFLPDLASYSHLLASLLNTRDPPDAALLERLLGDLRESRLEPDAPLFSDL 234

Query: 574 -----------------------GL---------LVDLWGKAGNVRKAWEWYEAMLQAG- 600
                                  GL         L+   G AG V +A   +     AG 
Sbjct: 235 ISAFARAALPDAALELLASAQAIGLTPRSNAVTALISALGTAGRVAEAEALFLEFFLAGE 294

Query: 601 LRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEA 653
           ++P     N+LL  ++R+  L +A  +L  M   G+ P   TY+LL+   T A
Sbjct: 295 IKPRTRAYNALLKGYVRIASLKNAEQVLDEMSQCGVAPDEATYSLLVDAYTRA 347


>gi|449451896|ref|XP_004143696.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
           mitochondrial-like [Cucumis sativus]
          Length = 1032

 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 108/394 (27%), Positives = 189/394 (47%), Gaps = 19/394 (4%)

Query: 362 TYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQM 421
           TY+ ++  L  +      N++LDQM+R+G +PNV  Y  LI +Y + +    A+++ K M
Sbjct: 453 TYSVLISGLCHSSDLQKANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIELLKIM 512

Query: 422 QVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHL 481
              G  PD   Y  LI    +A  ++ A  +   M   G+ P+  TY   IN   K+G +
Sbjct: 513 IANGVLPDLFCYNCLIIGLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSKSGEI 572

Query: 482 QAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIV 541
           Q A + F +M++ G +PN V Y I+I       N   AL  ++ M   G  PD   YS +
Sbjct: 573 QVAERYFKDMLSSGIVPNNVIYTILIKGHCDVGNTVEALSTFKCMLEKGLIPDIRAYSAI 632

Query: 542 MEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGL 601
           +  L   G   EA  VF +  +   VPD  +Y  L+  + K G++ KA + Y+ ML  G+
Sbjct: 633 IHSLSKNGKTKEAMGVFLKFLKTGVVPDVFLYNSLISGFCKEGDIEKASQLYDEMLHNGI 692

Query: 602 RPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS--C----CTEARS 655
            PN+   N+L++   ++G+++ A  L   +    L P + TY+ ++   C     TEA  
Sbjct: 693 NPNIVVYNTLINGLCKLGEVTKARELFDEIEEKDLVPDVVTYSTIIDGYCKSGNLTEAFK 752

Query: 656 PYDMGFCHELMAVSGHP-AHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRESKRGL-- 712
            +D     E+++    P  +++ + +   G +G     ++   L + H   ++S   L  
Sbjct: 753 LFD-----EMISKGISPDGYIYCILIDGCGKEG-----NLEKALSLFHEAQQKSVGSLSA 802

Query: 713 VDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAV 746
            ++++D   K G   EA  +++    K + P+ V
Sbjct: 803 FNSLIDSFCKHGKVIEARELFDDMVDKKLTPNIV 836



 Score =  156 bits (394), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 101/394 (25%), Positives = 192/394 (48%), Gaps = 2/394 (0%)

Query: 354 AGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNE 413
           +G   +  TYT ++    +        ++ D+M+  G + NVVTYN +I    +A  + +
Sbjct: 340 SGLNPNRFTYTALIDGFIKEGNIEEALRIKDEMITRGLKLNVVTYNAMIGGIAKAGEMAK 399

Query: 414 ALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIIN 473
           A+ +F +M + G EPD  TY  LID + K+  +  A ++  +M+A  L+P  FTYSV+I+
Sbjct: 400 AMSLFNEMLMAGLEPDTWTYNLLIDGYLKSHDMAKACELLAEMKARKLTPSPFTYSVLIS 459

Query: 474 CLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEP 533
            L  +  LQ A+++  +M+  G  PN+  Y  +I    +   Y+ A++L + M   G  P
Sbjct: 460 GLCHSSDLQKANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIELLKIMIANGVLP 519

Query: 534 DKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWY 593
           D   Y+ ++  L     ++EA+ +  +M  K   P+   YG  ++L+ K+G ++ A  ++
Sbjct: 520 DLFCYNCLIIGLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSKSGEIQVAERYF 579

Query: 594 EAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL-SCCTE 652
           + ML +G+ PN      L+     VG   +A    + ML  GL P ++ Y+ ++ S    
Sbjct: 580 KDMLSSGIVPNNVIYTILIKGHCDVGNTVEALSTFKCMLEKGLIPDIRAYSAIIHSLSKN 639

Query: 653 ARSPYDMGFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRESKRGL 712
            ++   MG   + +     P      S+ S      ++      + EM+H+        +
Sbjct: 640 GKTKEAMGVFLKFLKTGVVPDVFLYNSLISGFCKEGDIEKASQLYDEMLHN-GINPNIVV 698

Query: 713 VDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAV 746
            + +++ L K G   +A  +++   +K++ PD V
Sbjct: 699 YNTLINGLCKLGEVTKARELFDEIEEKDLVPDVV 732



 Score =  152 bits (384), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 94/297 (31%), Positives = 149/297 (50%), Gaps = 5/297 (1%)

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
           + G K + HTY   + +  ++ +     +    M+  G  PN V Y  LI  +       
Sbjct: 549 EKGIKPNAHTYGAFINLYSKSGEIQVAERYFKDMLSSGIVPNNVIYTILIKGHCDVGNTV 608

Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
           EAL  FK M   G  PD   Y  +I   +K G    AM ++ K    G+ PD F Y+ +I
Sbjct: 609 EALSTFKCMLEKGLIPDIRAYSAIIHSLSKNGKTKEAMGVFLKFLKTGVVPDVFLYNSLI 668

Query: 473 NCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFE 532
           +   K G ++ A QL+ EM++ G  PN+V YN +I    K      A +L+ +++     
Sbjct: 669 SGFCKEGDIEKASQLYDEMLHNGINPNIVVYNTLINGLCKLGEVTKARELFDEIEEKDLV 728

Query: 533 PDKVTYSIVMEVLGHC--GYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAW 590
           PD VTYS +++  G+C  G L EA  +F EM  K   PD  +Y +L+D  GK GN+ KA 
Sbjct: 729 PDVVTYSTIID--GYCKSGNLTEAFKLFDEMISKGISPDGYIYCILIDGCGKEGNLEKAL 786

Query: 591 EWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
             +    Q  +  ++   NSL+ +F + G++ +A  L   M++  L P++ TYT+L+
Sbjct: 787 SLFHEAQQKSV-GSLSAFNSLIDSFCKHGKVIEARELFDDMVDKKLTPNIVTYTILI 842



 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 102/337 (30%), Positives = 171/337 (50%), Gaps = 25/337 (7%)

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
           +A    D +TYT ++    +         +L +M ++ C+PN+ TYN  I    +   ++
Sbjct: 235 EAKIVPDVYTYTNVIKAHCKVGDVIKGKMVLSEMEKE-CKPNLFTYNAFIGGLCQTGAVD 293

Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
           EAL+V K M   G  PD  TY  L+D   K      A  +++ M ++GL+P+ FTY+ +I
Sbjct: 294 EALEVKKLMMEKGLGPDGHTYTLLVDGFCKQKRSKEAKLIFESMPSSGLNPNRFTYTALI 353

Query: 473 NCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFE 532
           +   K G+++ A ++  EM+ +G   N+VTYN MI   AKA     A+ L+ +M  AG E
Sbjct: 354 DGFIKEGNIEEALRIKDEMITRGLKLNVVTYNAMIGGIAKAGEMAKAMSLFNEMLMAGLE 413

Query: 533 PDKVTYSIVMEVLGHCGYL---DEAEA--VFAEMRRKNWVPDEPVYGLLVDLWGKAGNVR 587
           PD  TY+++++     GYL   D A+A  + AEM+ +   P    Y +L+     + +++
Sbjct: 414 PDTWTYNLLID-----GYLKSHDMAKACELLAEMKARKLTPSPFTYSVLISGLCHSSDLQ 468

Query: 588 KAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
           KA E  + M++ G++PNV    +L+ A+++  +   A  LL+ M+  G+ P L  Y  L+
Sbjct: 469 KANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIELLKIMIANGVLPDLFCYNCLI 528

Query: 648 SCCTEARSPYDMGFCHELMAVSGHPAHMFLLSMPSPG 684
                      +G C    A     A M L+ M   G
Sbjct: 529 -----------IGLCR---AKKVEEAKMLLVDMGEKG 551



 Score =  130 bits (327), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 111/408 (27%), Positives = 183/408 (44%), Gaps = 38/408 (9%)

Query: 357 KHDEHTYTTMVGILGRARQFGAINKLLD---QMVRDGCQPNVVTYNRLIHSYGRANYLNE 413
           K +  TY   +G L    Q GA+++ L+    M+  G  P+  TY  L+  + +     E
Sbjct: 273 KPNLFTYNAFIGGLC---QTGAVDEALEVKKLMMEKGLGPDGHTYTLLVDGFCKQKRSKE 329

Query: 414 ALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIIN 473
           A  +F+ M   G  P+R TY  LID   K G ++ A+ +  +M   GL  +  TY+ +I 
Sbjct: 330 AKLIFESMPSSGLNPNRFTYTALIDGFIKEGNIEEALRIKDEMITRGLKLNVVTYNAMIG 389

Query: 474 CLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEP 533
            + KAG +  A  LF EM+  G  P+  TYN++I    K+ +   A +L  +M+     P
Sbjct: 390 GIAKAGEMAKAMSLFNEMLMAGLEPDTWTYNLLIDGYLKSHDMAKACELLAEMKARKLTP 449

Query: 534 DKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWY 593
              TYS+++  L H   L +A  V  +M R    P+  +YG L+  + +      A E  
Sbjct: 450 SPFTYSVLISGLCHSSDLQKANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIELL 509

Query: 594 EAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEA 653
           + M+  G+ P++   N L+    R  ++ +A  LL  M   G+KP+  TY   ++     
Sbjct: 510 KIMIANGVLPDLFCYNCLIIGLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFIN----- 564

Query: 654 RSPYDMGFCHELMAVSG--HPAHMFLLSMPSPGPDGQNV------RDH--VGSFLEMMHS 703
                      L + SG    A  +   M S G    NV      + H  VG+ +E + +
Sbjct: 565 -----------LYSKSGEIQVAERYFKDMLSSGIVPNNVIYTILIKGHCDVGNTVEALST 613

Query: 704 EDRESKRGLV------DAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDA 745
                ++GL+       A++  L K+G  +EA  V+    +  V PD 
Sbjct: 614 FKCMLEKGLIPDIRAYSAIIHSLSKNGKTKEAMGVFLKFLKTGVVPDV 661



 Score =  125 bits (313), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 86/340 (25%), Positives = 155/340 (45%), Gaps = 37/340 (10%)

Query: 343 ALG-FFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRL 401
           A+G F  +L+   G   D   Y +++    +       ++L D+M+ +G  PN+V YN L
Sbjct: 645 AMGVFLKFLK--TGVVPDVFLYNSLISGFCKEGDIEKASQLYDEMLHNGINPNIVVYNTL 702

Query: 402 IHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGL 461
           I+   +   + +A ++F +++     PD VTY T+ID + K+G L  A  ++ +M + G+
Sbjct: 703 INGLCKLGEVTKARELFDEIEEKDLVPDVVTYSTIIDGYCKSGNLTEAFKLFDEMISKGI 762

Query: 462 SPDTFTYSVIINCLGKAGHLQAA----------------------------------HQL 487
           SPD + Y ++I+  GK G+L+ A                                   +L
Sbjct: 763 SPDGYIYCILIDGCGKEGNLEKALSLFHEAQQKSVGSLSAFNSLIDSFCKHGKVIEAREL 822

Query: 488 FCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGH 547
           F +MV++   PN+VTY I+I    KA   + A +L+ DM+     P+ +TY+ ++     
Sbjct: 823 FDDMVDKKLTPNIVTYTILIDAYGKAEMMEEAEQLFLDMETRNIIPNTLTYTSLLLSYNQ 882

Query: 548 CGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPT 607
            G   +  ++F +M  +    D   YG++   + K G   +A +     L  G++     
Sbjct: 883 IGNRFKMISLFKDMEARGIACDAIAYGVMASAYCKEGKSLEALKLLNKSLVEGIKLEDDV 942

Query: 608 CNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
            ++L+    +  Q+S    LL  M    L  S +T   LL
Sbjct: 943 FDALIFHLCKEKQISTVLELLSEMGKEELSLSSKTCNTLL 982



 Score =  120 bits (302), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 82/305 (26%), Positives = 137/305 (44%), Gaps = 35/305 (11%)

Query: 386 MVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGF 445
           M+  G  P++  Y+ +IHS  +     EA+ VF +    G  PD   Y +LI    K G 
Sbjct: 617 MLEKGLIPDIRAYSAIIHSLSKNGKTKEAMGVFLKFLKTGVVPDVFLYNSLISGFCKEGD 676

Query: 446 LDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNI 505
           ++ A  +Y +M   G++P+   Y+ +IN L K G +  A +LF E+  +  +P++VTY+ 
Sbjct: 677 IEKASQLYDEMLHNGINPNIVVYNTLINGLCKLGEVTKARELFDEIEEKDLVPDVVTYST 736

Query: 506 MIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLD------------- 552
           +I    K+ N   A KL+ +M + G  PD   Y I+++  G  G L+             
Sbjct: 737 IIDGYCKSGNLTEAFKLFDEMISKGISPDGYIYCILIDGCGKEGNLEKALSLFHEAQQKS 796

Query: 553 ---------------------EAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWE 591
                                EA  +F +M  K   P+   Y +L+D +GKA  + +A +
Sbjct: 797 VGSLSAFNSLIDSFCKHGKVIEARELFDDMVDKKLTPNIVTYTILIDAYGKAEMMEEAEQ 856

Query: 592 WYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSC-C 650
            +  M    + PN  T  SLL ++ ++G       L + M   G+      Y ++ S  C
Sbjct: 857 LFLDMETRNIIPNTLTYTSLLLSYNQIGNRFKMISLFKDMEARGIACDAIAYGVMASAYC 916

Query: 651 TEARS 655
            E +S
Sbjct: 917 KEGKS 921



 Score =  114 bits (284), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 107/406 (26%), Positives = 173/406 (42%), Gaps = 39/406 (9%)

Query: 286 PFSRHFASTGNVVESVSRILRQWKWGPLAEEALGNTNYSMDAYQANQVLKQLQ----DHT 341
           PF  H+  T   V   S IL++  W     + L N   ++       V   LQ    D +
Sbjct: 50  PFD-HYDDT---VREFSMILKRKDW-----QILLNNEDNVRKLNPEIVCSVLQKSEIDDS 100

Query: 342 VAL-GFFNWLRRQAGFKHDEHTYTTMV------GILGRARQFGAINKLL----------D 384
           V L  FF W   +       H+Y+ +       G++ +A     + KLL          D
Sbjct: 101 VRLQNFFYWSSSKMSTPQYLHSYSILAIRLCNSGLIHQADNM--LEKLLQTRKPPLEILD 158

Query: 385 QMVR---DGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHA 441
            +VR   +    N+  ++  I  +    +LNEA  VF      G  P  +    L+    
Sbjct: 159 SLVRCYREFGGSNLTVFDIFIDKFRVLGFLNEASSVFIASISEGFFPTLICCNNLMRDLL 218

Query: 442 KAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLV 501
           KA  + +   +Y  M  A + PD +TY+ +I    K G +     +  EM  + C PNL 
Sbjct: 219 KANMMGLFWKVYGSMVEAKIVPDVYTYTNVIKAHCKVGDVIKGKMVLSEM-EKECKPNLF 277

Query: 502 TYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEM 561
           TYN  I    +      AL++ + M   G  PD  TY+++++         EA+ +F  M
Sbjct: 278 TYNAFIGGLCQTGAVDEALEVKKLMMEKGLGPDGHTYTLLVDGFCKQKRSKEAKLIFESM 337

Query: 562 RRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQL 621
                 P+   Y  L+D + K GN+ +A    + M+  GL+ NV T N+++    + G++
Sbjct: 338 PSSGLNPNRFTYTALIDGFIKEGNIEEALRIKDEMITRGLKLNVVTYNAMIGGIAKAGEM 397

Query: 622 SDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGFCHELMA 667
           + A  L   ML  GL+P   TY LL+    ++   +DM    EL+A
Sbjct: 398 AKAMSLFNEMLMAGLEPDTWTYNLLIDGYLKS---HDMAKACELLA 440



 Score =  100 bits (249), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 72/277 (25%), Positives = 127/277 (45%), Gaps = 12/277 (4%)

Query: 387 VRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFL 446
           + +G  P ++  N L+    +AN +     V+  M      PD  TY  +I  H K G +
Sbjct: 199 ISEGFFPTLICCNNLMRDLLKANMMGLFWKVYGSMVEAKIVPDVYTYTNVIKAHCKVGDV 258

Query: 447 DVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIM 506
                +  +M+     P+ FTY+  I  L + G +  A ++   M+ +G  P+  TY ++
Sbjct: 259 IKGKMVLSEMEKE-CKPNLFTYNAFIGGLCQTGAVDEALEVKKLMMEKGLGPDGHTYTLL 317

Query: 507 IALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNW 566
           +    K +  + A  ++  M ++G  P++ TY+ +++     G ++EA  +  EM  +  
Sbjct: 318 VDGFCKQKRSKEAKLIFESMPSSGLNPNRFTYTALIDGFIKEGNIEEALRIKDEMITRGL 377

Query: 567 VPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYH 626
             +   Y  ++    KAG + KA   +  ML AGL P+  T N L+  +L+   ++ A  
Sbjct: 378 KLNVVTYNAMIGGIAKAGEMAKAMSLFNEMLMAGLEPDTWTYNLLIDGYLKSHDMAKACE 437

Query: 627 LLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGFCH 663
           LL  M    L PS  TY++L+S           G CH
Sbjct: 438 LLAEMKARKLTPSPFTYSVLIS-----------GLCH 463



 Score = 79.3 bits (194), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 51/188 (27%), Positives = 87/188 (46%)

Query: 381  KLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIH 440
            +L D MV     PN+VTY  LI +YG+A  + EA  +F  M+     P+ +TY +L+  +
Sbjct: 821  ELFDDMVDKKLTPNIVTYTILIDAYGKAEMMEEAEQLFLDMETRNIIPNTLTYTSLLLSY 880

Query: 441  AKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNL 500
             + G     + ++K M+A G++ D   Y V+ +   K G    A +L  + + +G     
Sbjct: 881  NQIGNRFKMISLFKDMEARGIACDAIAYGVMASAYCKEGKSLEALKLLNKSLVEGIKLED 940

Query: 501  VTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAE 560
              ++ +I    K +   + L+L  +M          T + ++      G  DEA  V   
Sbjct: 941  DVFDALIFHLCKEKQISTVLELLSEMGKEELSLSSKTCNTLLLGFYKSGNEDEASKVLGV 1000

Query: 561  MRRKNWVP 568
            M+R  WVP
Sbjct: 1001 MQRLGWVP 1008



 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 75/360 (20%), Positives = 136/360 (37%), Gaps = 72/360 (20%)

Query: 445 FLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYN 504
            LD  +  Y++   + L+     + + I+     G L  A  +F   +++G  P L+  N
Sbjct: 156 ILDSLVRCYREFGGSNLT----VFDIFIDKFRVLGFLNEASSVFIASISEGFFPTLICCN 211

Query: 505 IMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRK 564
            ++    KA       K+Y  M  A   PD  TY+ V++     G + + + V +EM ++
Sbjct: 212 NLMRDLLKANMMGLFWKVYGSMVEAKIVPDVYTYTNVIKAHCKVGDVIKGKMVLSEMEKE 271

Query: 565 NWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDA 624
                                                +PN+ T N+ +    + G + +A
Sbjct: 272 ------------------------------------CKPNLFTYNAFIGGLCQTGAVDEA 295

Query: 625 YHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGFCHELMAVSGHPAHMFLLSMPSPG 684
             + + M+  GL P   TYTLL+            GFC +        A +   SMPS G
Sbjct: 296 LEVKKLMMEKGLGPDGHTYTLLVD-----------GFCKQ---KRSKEAKLIFESMPSSG 341

Query: 685 --PDGQNVRDHVGSFL------EMMHSEDRESKRGL------VDAVVDFLHKSGLKEEAG 730
             P+       +  F+      E +  +D    RGL       +A++  + K+G   +A 
Sbjct: 342 LNPNRFTYTALIDGFIKEGNIEEALRIKDEMITRGLKLNVVTYNAMIGGIAKAGEMAKAM 401

Query: 731 SVWEVAAQKNVYPDAVKEKGMSYWLINLHVMSDGTAVIALSR----TLAWFRKQMLISGV 786
           S++       + PD      +    +  H M+    ++A  +    T + F   +LISG+
Sbjct: 402 SLFNEMLMAGLEPDTWTYNLLIDGYLKSHDMAKACELLAEMKARKLTPSPFTYSVLISGL 461



 Score = 53.1 bits (126), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 41/178 (23%), Positives = 73/178 (41%)

Query: 362  TYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQM 421
            TYT ++   G+A       +L   M      PN +TY  L+ SY +     + + +FK M
Sbjct: 837  TYTILIDAYGKAEMMEEAEQLFLDMETRNIIPNTLTYTSLLLSYNQIGNRFKMISLFKDM 896

Query: 422  QVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHL 481
            +  G   D + Y  +   + K G    A+ +  K    G+  +   +  +I  L K   +
Sbjct: 897  EARGIACDAIAYGVMASAYCKEGKSLEALKLLNKSLVEGIKLEDDVFDALIFHLCKEKQI 956

Query: 482  QAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYS 539
                +L  EM  +    +  T N ++    K+ N   A K+   MQ  G+ P  ++ +
Sbjct: 957  STVLELLSEMGKEELSLSSKTCNTLLLGFYKSGNEDEASKVLGVMQRLGWVPTSLSLT 1014


>gi|162462150|ref|NP_001105879.1| chloroplast RNA processing1 [Zea mays]
 gi|3289002|gb|AAC25599.1| CRP1 [Zea mays]
          Length = 668

 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 96/318 (30%), Positives = 154/318 (48%)

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
           Q G   DE TY+ +V    RA ++ +   LL +M  DG +P+   ++R++  +       
Sbjct: 327 QCGVAPDEATYSLLVDAYTRAGRWESARILLKEMEADGVKPSSYVFSRILAGFRDRGDWQ 386

Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
           +A  V ++MQ  G  PDR  Y  +ID   K   L  AMD + KM+  G+ PD  T++ +I
Sbjct: 387 KAFAVLREMQASGVRPDRHFYNVMIDTFGKYNCLGHAMDAFNKMREEGIEPDVVTWNTLI 446

Query: 473 NCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFE 532
           +   K G    A +LF EM    C P   TYNIMI L  +  +++    +  +M+  G  
Sbjct: 447 DAHCKGGRHDRAAELFEEMRESNCPPGTTTYNIMINLLGEQEHWEGVEAMLSEMKEQGLV 506

Query: 533 PDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEW 592
           P+ +TY+ +++V G  G   EA      M+     P   +Y  LV+ + + G    A   
Sbjct: 507 PNIITYTTLVDVYGRSGRYKEAIDCIEAMKADGLKPSPTMYHALVNAYAQRGLADHALNV 566

Query: 593 YEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTE 652
            +AM   GL  ++   NSL++AF    ++ +A+ +LQ M   GL+P + TYT L+     
Sbjct: 567 VKAMKADGLEVSILVLNSLINAFGEDRRVVEAFSVLQFMRENGLRPDVITYTTLMKALIR 626

Query: 653 ARSPYDMGFCHELMAVSG 670
                 +   +E M  SG
Sbjct: 627 VEQFDKVPVIYEEMITSG 644



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 111/443 (25%), Positives = 186/443 (41%), Gaps = 58/443 (13%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDG-CQPNVVTYNRLIHSYGRANYLNE 413
           G     +  T ++  LG A +      L  +    G  +P    YN L+  Y R   L  
Sbjct: 258 GLTPRSNAVTALISALGTAGRVAEAEALFLEFFLAGEIKPRTRAYNALLKGYVRIGSLKN 317

Query: 414 ALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIIN 473
           A  V  +M   G  PD  TY  L+D + +AG  + A  + K+M+A G+ P ++ +S I+ 
Sbjct: 318 AEQVLDEMSQCGVAPDEATYSLLVDAYTRAGRWESARILLKEMEADGVKPSSYVFSRILA 377

Query: 474 CLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEP 533
                G  Q A  +  EM   G  P+   YN+MI    K      A+  +  M+  G EP
Sbjct: 378 GFRDRGDWQKAFAVLREMQASGVRPDRHFYNVMIDTFGKYNCLGHAMDAFNKMREEGIEP 437

Query: 534 DKVTYSIVMEVLGHC--GYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWE 591
           D VT++ +++   HC  G  D A  +F EMR  N  P    Y ++++L G+    ++ WE
Sbjct: 438 DVVTWNTLID--AHCKGGRHDRAAELFEEMRESNCPPGTTTYNIMINLLGE----QEHWE 491

Query: 592 WYEAML----QAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
             EAML    + GL PN+ T  +L+  + R G+  +A   ++ M   GLKPS   Y  L+
Sbjct: 492 GVEAMLSEMKEQGLVPNIITYTTLVDVYGRSGRYKEAIDCIEAMKADGLKPSPTMYHALV 551

Query: 648 SCCTEARSPYDMGFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRE 707
           +   +                                   + + DH  + ++ M ++  E
Sbjct: 552 NAYAQ-----------------------------------RGLADHALNVVKAMKADGLE 576

Query: 708 SKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAVKEKGMSYWLINLHVMSDGTAV 767
               +++++++   +     EA SV +   +  + PD +    +   LI +    D   V
Sbjct: 577 VSILVLNSLINAFGEDRRVVEAFSVLQFMRENGLRPDVITYTTLMKALIRVEQF-DKVPV 635

Query: 768 IALSRTLAWFRKQMLISGVGPSR 790
           I          ++M+ SG  P R
Sbjct: 636 I---------YEEMITSGCAPDR 649



 Score =  103 bits (256), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 83/370 (22%), Positives = 162/370 (43%), Gaps = 18/370 (4%)

Query: 237 VQPRSKAHSNRLNSNFKSNLQPSDAKVVECVSERFSKPSREMKIPAGLAPFSRHFASTGN 296
           ++PR++A+    N+  K  ++    K  E V +  S+         G+AP     A+   
Sbjct: 295 IKPRTRAY----NALLKGYVRIGSLKNAEQVLDEMSQ--------CGVAPDE---ATYSL 339

Query: 297 VVESVSRILRQWKWGPLAEEALGNTNYSMDAYQANQVLKQLQDHTVALGFFNWLR--RQA 354
           +V++ +R  R W+   +  + +        +Y  +++L   +D       F  LR  + +
Sbjct: 340 LVDAYTRAGR-WESARILLKEMEADGVKPSSYVFSRILAGFRDRGDWQKAFAVLREMQAS 398

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           G + D H Y  M+   G+    G      ++M  +G +P+VVT+N LI ++ +    + A
Sbjct: 399 GVRPDRHFYNVMIDTFGKYNCLGHAMDAFNKMREEGIEPDVVTWNTLIDAHCKGGRHDRA 458

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
            ++F++M+   C P   TY  +I++  +    +    M  +M+  GL P+  TY+ +++ 
Sbjct: 459 AELFEEMRESNCPPGTTTYNIMINLLGEQEHWEGVEAMLSEMKEQGLVPNIITYTTLVDV 518

Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPD 534
            G++G  + A      M   G  P+   Y+ ++   A+      AL + + M+  G E  
Sbjct: 519 YGRSGRYKEAIDCIEAMKADGLKPSPTMYHALVNAYAQRGLADHALNVVKAMKADGLEVS 578

Query: 535 KVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYE 594
            +  + ++   G    + EA +V   MR     PD   Y  L+    +     K    YE
Sbjct: 579 ILVLNSLINAFGEDRRVVEAFSVLQFMRENGLRPDVITYTTLMKALIRVEQFDKVPVIYE 638

Query: 595 AMLQAGLRPN 604
            M+ +G  P+
Sbjct: 639 EMITSGCAPD 648



 Score = 95.9 bits (237), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 74/314 (23%), Positives = 132/314 (42%), Gaps = 45/314 (14%)

Query: 381 KLLDQMVRDGCQPNVVTYNRLIHSY------GRANYLNEALDVFKQMQVVGCEPDRVTYC 434
           +LL  +      P++ +Y+ L+ S         A  L   L   ++ ++   EPD   + 
Sbjct: 176 RLLSLLREHDFLPDLASYSHLLASLLNTRDPPDAALLERLLGDLRESRL---EPDAPLFS 232

Query: 435 TLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFC----- 489
            LI   A+A   D A+++    QA GL+P +   + +I+ LG AG +  A  LF      
Sbjct: 233 DLISAFARAALPDAALELLASAQAIGLTPRSNAVTALISALGTAGRVAEAEALFLEFFLA 292

Query: 490 -------------------------------EMVNQGCIPNLVTYNIMIALQAKARNYQS 518
                                          EM   G  P+  TY++++    +A  ++S
Sbjct: 293 GEIKPRTRAYNALLKGYVRIGSLKNAEQVLDEMSQCGVAPDEATYSLLVDAYTRAGRWES 352

Query: 519 ALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVD 578
           A  L ++M+  G +P    +S ++      G   +A AV  EM+     PD   Y +++D
Sbjct: 353 ARILLKEMEADGVKPSSYVFSRILAGFRDRGDWQKAFAVLREMQASGVRPDRHFYNVMID 412

Query: 579 LWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKP 638
            +GK   +  A + +  M + G+ P+V T N+L+ A  + G+   A  L + M      P
Sbjct: 413 TFGKYNCLGHAMDAFNKMREEGIEPDVVTWNTLIDAHCKGGRHDRAAELFEEMRESNCPP 472

Query: 639 SLQTYTLLLSCCTE 652
              TY ++++   E
Sbjct: 473 GTTTYNIMINLLGE 486



 Score = 53.5 bits (127), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 37/168 (22%), Positives = 71/168 (42%), Gaps = 35/168 (20%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           ++ G   +  TYTT+V + GR+ ++      ++ M  DG +P+   Y+ L+++Y +    
Sbjct: 501 KEQGLVPNIITYTTLVDVYGRSGRYKEAIDCIEAMKADGLKPSPTMYHALVNAYAQRGLA 560

Query: 412 NEALDVFKQMQVVGCE-----------------------------------PDRVTYCTL 436
           + AL+V K M+  G E                                   PD +TY TL
Sbjct: 561 DHALNVVKAMKADGLEVSILVLNSLINAFGEDRRVVEAFSVLQFMRENGLRPDVITYTTL 620

Query: 437 IDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAA 484
           +    +    D    +Y++M  +G +PD    +++ + L    H++ A
Sbjct: 621 MKALIRVEQFDKVPVIYEEMITSGCAPDRKARAMLRSGLKYIKHMRVA 668



 Score = 45.4 bits (106), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 42/173 (24%), Positives = 69/173 (39%), Gaps = 39/173 (22%)

Query: 520 LKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEA---EAVFAEMRRKNWVPDEPVY--- 573
           L+L   ++   F PD  +YS ++  L +     +A   E +  ++R     PD P++   
Sbjct: 175 LRLLSLLREHDFLPDLASYSHLLASLLNTRDPPDAALLERLLGDLRESRLEPDAPLFSDL 234

Query: 574 -----------------------GL---------LVDLWGKAGNVRKAWEWYEAMLQAG- 600
                                  GL         L+   G AG V +A   +     AG 
Sbjct: 235 ISAFARAALPDAALELLASAQAIGLTPRSNAVTALISALGTAGRVAEAEALFLEFFLAGE 294

Query: 601 LRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEA 653
           ++P     N+LL  ++R+G L +A  +L  M   G+ P   TY+LL+   T A
Sbjct: 295 IKPRTRAYNALLKGYVRIGSLKNAEQVLDEMSQCGVAPDEATYSLLVDAYTRA 347


>gi|297851460|ref|XP_002893611.1| hypothetical protein ARALYDRAFT_336125 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297339453|gb|EFH69870.1| hypothetical protein ARALYDRAFT_336125 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 814

 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 116/396 (29%), Positives = 187/396 (47%), Gaps = 18/396 (4%)

Query: 282 AGLAPFSRHFASTGNVVESVSR--ILRQW--------KWGPLAEEALGNTNYSMDAYQAN 331
            G  P SR      +V E  SR  ++R+          W P  E  + N   S+   Q  
Sbjct: 122 VGKIPQSREDVGRFDVEEDESRHPLVREIGRLIGLRSSWNPKHEGQMRNLLRSLKPSQVC 181

Query: 332 QVLKQLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGC 391
            VL+   D  VAL FF W  RQ  ++HD   Y +M+ +L + +      ++L  M R G 
Sbjct: 182 AVLRSQDDERVALKFFYWADRQWRYRHDPMVYYSMLEVLSKTKMCQGARRVLVLMKRRGI 241

Query: 392 QPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMD 451
                 + R++ SY RA  L +AL V   MQ  G EP+ +   T ID+  +A  L+ A+ 
Sbjct: 242 YRTPEAFLRVMVSYSRAGQLRDALKVLTLMQRAGVEPNLLICNTTIDVFVRANRLEKALR 301

Query: 452 MYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQA 511
             ++MQ  G+ P+  TY+ +I        ++ A +L  +M ++GC+P+ V+Y  ++    
Sbjct: 302 FLERMQVVGIVPNVVTYNCMIRGYCDLHRVEEAIELLDDMPSKGCLPDKVSYYTIMGYLC 361

Query: 512 KARNYQSALKLYRDM-QNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDE 570
           K +       L + M +  G   D+VTY+ ++ +L    + DEA     +   K +  D+
Sbjct: 362 KEKRIVEVRDLMKKMAKEHGLVRDQVTYNTLIHMLTKHDHADEALWFLKDAEEKGFRIDK 421

Query: 571 PVYGLLVDLWGKAGNVRKAWEWYEAMLQAG-LRPNVPTCNSLLSAFLRVGQLSDAYHLLQ 629
             Y  +V    K G + +A +    ML  G   P+V T  ++++ F R+G++  A  LLQ
Sbjct: 422 VGYSAIVHALCKEGRMSEAKDLINEMLSKGHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQ 481

Query: 630 GMLNLGLKPSLQTYTLLLS--CCT----EARSPYDM 659
            M   G KP+  +YT LL+  C T    EAR   +M
Sbjct: 482 IMHTHGYKPNTVSYTALLNGLCRTGKSLEAREMMNM 517



 Score =  112 bits (279), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 80/310 (25%), Positives = 146/310 (47%), Gaps = 3/310 (0%)

Query: 326 DAYQANQVLKQLQDHTVALGFFNWLR--RQAGFKHDEHTYTTMVGILGRARQFGAINKLL 383
           D    N ++  L  H  A     +L+   + GF+ D+  Y+ +V  L +  +      L+
Sbjct: 385 DQVTYNTLIHMLTKHDHADEALWFLKDAEEKGFRIDKVGYSAIVHALCKEGRMSEAKDLI 444

Query: 384 DQMVRDG-CQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAK 442
           ++M+  G C P+VVTY  +++ + R   +++A  + + M   G +P+ V+Y  L++   +
Sbjct: 445 NEMLSKGHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQIMHTHGYKPNTVSYTALLNGLCR 504

Query: 443 AGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVT 502
            G    A +M    +    SP++ TYSV+++ L K G L  A  +  EMV +G  P  V 
Sbjct: 505 TGKSLEAREMMNMSEEQWWSPNSITYSVLMHGLRKEGKLSEACDVVREMVLKGFFPGPVE 564

Query: 503 YNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMR 562
            N+++    +      A K   +  N G   + V ++ V+        LD A +V  +M 
Sbjct: 565 INLLLQSLCRDGRTHEARKFMEECLNKGCAINVVNFTTVIHGFCQNDELDAALSVLDDMY 624

Query: 563 RKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLS 622
             N   D   Y  LVD  GK G + +A E  + ML  G+ P   T  +++  + ++ ++ 
Sbjct: 625 LINKHADVFTYTTLVDALGKKGRIAEATELMKKMLHKGIDPTPVTYRTVIHRYCQMEKVD 684

Query: 623 DAYHLLQGML 632
           D   +L+ M+
Sbjct: 685 DLVAILEKMI 694



 Score =  108 bits (271), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 77/291 (26%), Positives = 135/291 (46%), Gaps = 2/291 (0%)

Query: 359 DEHTYTTMVGILGRARQFGAINKLLDQMVRD-GCQPNVVTYNRLIHSYGRANYLNEALDV 417
           D+ +Y T++G L + ++   +  L+ +M ++ G   + VTYN LIH   + ++ +EAL  
Sbjct: 349 DKVSYYTIMGYLCKEKRIVEVRDLMKKMAKEHGLVRDQVTYNTLIHMLTKHDHADEALWF 408

Query: 418 FKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAG-LSPDTFTYSVIINCLG 476
            K  +  G   D+V Y  ++    K G +  A D+  +M + G   PD  TY+ ++N   
Sbjct: 409 LKDAEEKGFRIDKVGYSAIVHALCKEGRMSEAKDLINEMLSKGHCPPDVVTYTAVVNGFC 468

Query: 477 KAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKV 536
           + G +  A +L   M   G  PN V+Y  ++    +      A ++    +   + P+ +
Sbjct: 469 RLGEVDKAKKLLQIMHTHGYKPNTVSYTALLNGLCRTGKSLEAREMMNMSEEQWWSPNSI 528

Query: 537 TYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAM 596
           TYS++M  L   G L EA  V  EM  K + P      LL+    + G   +A ++ E  
Sbjct: 529 TYSVLMHGLRKEGKLSEACDVVREMVLKGFFPGPVEINLLLQSLCRDGRTHEARKFMEEC 588

Query: 597 LQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
           L  G   NV    +++  F +  +L  A  +L  M  +     + TYT L+
Sbjct: 589 LNKGCAINVVNFTTVIHGFCQNDELDAALSVLDDMYLINKHADVFTYTTLV 639


>gi|297843788|ref|XP_002889775.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297335617|gb|EFH66034.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 598

 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 111/434 (25%), Positives = 209/434 (48%), Gaps = 15/434 (3%)

Query: 320 NTNYSMDAYQANQVLKQLQDHTVALGFFNWLRRQA--GFKHDEHTYTTMVGILGRARQFG 377
           N+++ ++  ++N  L+QL         F +L      G   D    TT++    R  +  
Sbjct: 95  NSSFVLEDVESNNHLRQLVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRMGKTR 154

Query: 378 AINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLI 437
              K+L+ +   G  P+V+TYN +I  Y +A  +N AL V  +M V    PD VTY T++
Sbjct: 155 KAAKILEVLEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRMSV---SPDVVTYNTIL 211

Query: 438 DIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCI 497
                +G L  AM++  +M      PD  TY+++I    +   +  A +L  EM ++GC 
Sbjct: 212 RSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGQAMKLLDEMRDRGCT 271

Query: 498 PNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAV 557
           P++VTYN+++    K      A+K   DM ++G +P+ +T++I++  +   G   +AE +
Sbjct: 272 PDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKL 331

Query: 558 FAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLR 617
            A+M RK + P    + +L++   + G + +A +  E M + G +PN  + N LL  F +
Sbjct: 332 LADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPKHGCQPNSLSYNPLLHGFCK 391

Query: 618 VGQLSDAYHLLQGMLNLGLKPSLQTY-TLLLSCCTEARSPYDMGFCHELMAVSGHPA--- 673
             ++  A   L+ M++ G  P + TY T+L + C + +    +   ++L +    P    
Sbjct: 392 EKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLIT 451

Query: 674 -HMFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRESKRGLVDAVVDFLHKSGLKEEAGSV 732
            +  +  +   G  G+ ++      L+ M ++D +       ++V  L + G  +EA   
Sbjct: 452 YNTVIDGLAKAGKTGKAIK-----LLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKF 506

Query: 733 WEVAAQKNVYPDAV 746
           +    +  V P+AV
Sbjct: 507 FHEFERMGVRPNAV 520



 Score =  155 bits (391), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 103/371 (27%), Positives = 167/371 (45%), Gaps = 37/371 (9%)

Query: 314 AEEALGNTNYSMDAYQANQVLKQLQDHTVALGFFNWLRR--QAGFKHDEHTYTTMVGILG 371
           A   L   + S D    N +L+ L D          L R  Q     D  TYT ++    
Sbjct: 191 ALSVLDRMSVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATC 250

Query: 372 RARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRV 431
           R    G   KLLD+M   GC P+VVTYN L++   +   L+EA+     M   GC+P+ +
Sbjct: 251 RDSGVGQAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVI 310

Query: 432 TY-------CT----------------------------LIDIHAKAGFLDVAMDMYKKM 456
           T+       C+                            LI+   + G L  A+D+ +KM
Sbjct: 311 THNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKM 370

Query: 457 QAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNY 516
              G  P++ +Y+ +++   K   +  A +    MV++GC P++VTYN M+    K    
Sbjct: 371 PKHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKV 430

Query: 517 QSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLL 576
           + A+++   + + G  P  +TY+ V++ L   G   +A  +  EMR K+  PD   Y  L
Sbjct: 431 EDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSL 490

Query: 577 VDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGL 636
           V    + G V +A +++    + G+RPN  T NS++    +  Q   A   L  M+N G 
Sbjct: 491 VGGLSREGKVDEAIKFFHEFERMGVRPNAVTFNSIMLGLCKTRQTDRAIDFLVYMINRGC 550

Query: 637 KPSLQTYTLLL 647
           KP+  +YT+L+
Sbjct: 551 KPTETSYTILI 561



 Score =  124 bits (311), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 69/254 (27%), Positives = 126/254 (49%), Gaps = 2/254 (0%)

Query: 348 NWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGR 407
           + LR+  GF     T+  ++  L R    G    +L++M + GCQPN ++YN L+H + +
Sbjct: 334 DMLRK--GFSPSVVTFNILINFLCRKGLLGRAIDILEKMPKHGCQPNSLSYNPLLHGFCK 391

Query: 408 ANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFT 467
              ++ A++  ++M   GC PD VTY T++    K G ++ A+++  ++ + G SP   T
Sbjct: 392 EKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLIT 451

Query: 468 YSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQ 527
           Y+ +I+ L KAG    A +L  EM  +   P+ +TY+ ++   ++      A+K + + +
Sbjct: 452 YNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFE 511

Query: 528 NAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVR 587
             G  P+ VT++ +M  L      D A      M  +   P E  Y +L++     G  +
Sbjct: 512 RMGVRPNAVTFNSIMLGLCKTRQTDRAIDFLVYMINRGCKPTETSYTILIEGLAYEGMAK 571

Query: 588 KAWEWYEAMLQAGL 601
           +A E    +   GL
Sbjct: 572 EALELLNELCNKGL 585


>gi|356513567|ref|XP_003525484.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74850,
           chloroplastic-like [Glycine max]
          Length = 857

 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 116/457 (25%), Positives = 204/457 (44%), Gaps = 70/457 (15%)

Query: 336 QLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNV 395
           Q  D   +L  F +++RQ   K +EH +T M+ +LGR        ++ D+M  +G    V
Sbjct: 110 QRGDWQRSLRLFKYMQRQIWCKPNEHIHTIMITLLGREGLLDKCREVFDEMPSNGVVRTV 169

Query: 396 VTYNRLIHSYGRANYLNEALD------------------------------------VFK 419
            +Y  +I++YGR    + +L+                                    +F 
Sbjct: 170 YSYTAIINAYGRNGQFHASLELLNGMKQERVSPSILTYNTVINACARGGLDWEGLLGLFA 229

Query: 420 QMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAG 479
           +M+  G +PD +TY TL+   A  G  D A  +++ M  +G+ PD  TYS ++   GK  
Sbjct: 230 EMRHEGIQPDVITYNTLLGACAHRGLGDEAEMVFRTMNESGIVPDINTYSYLVQTFGKLN 289

Query: 480 HLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYS 539
            L+   +L  EM   G +P++ +YN+++   A+  + + A+ ++R MQ AG   +  TYS
Sbjct: 290 RLEKVSELLREMECGGNLPDITSYNVLLEAYAELGSIKEAMGVFRQMQAAGCVANAATYS 349

Query: 540 IVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQA 599
           +++ + G  G  D+   +F EM+  N  PD   Y +L+ ++G+ G  ++    +  M + 
Sbjct: 350 VLLNLYGKHGRYDDVRDLFLEMKVSNTDPDAGTYNILIQVFGEGGYFKEVVTLFHDMAEE 409

Query: 600 GLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDM 659
            + PN+ T   L+ A  + G   DA  +L  M   G+ PS + YT ++    +A      
Sbjct: 410 NVEPNMQTYEGLIFACGKGGLYEDAKKILLHMNEKGVVPSSKAYTGVIEAFGQA------ 463

Query: 660 GFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGS------FLEMMHSEDRESKRGLV 713
                  A+      MF            N  + VGS      +  ++H+  R       
Sbjct: 464 -------ALYEEALVMF------------NTMNEVGSNPTVETYNSLIHAFARGGLYKEA 504

Query: 714 DAVVDFLHKSGLKEEAGS---VWEVAAQKNVYPDAVK 747
           +A++  +++SGLK +  S   V E   Q   Y +AVK
Sbjct: 505 EAILSRMNESGLKRDVHSFNGVIEAFRQGGQYEEAVK 541



 Score =  159 bits (401), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 116/479 (24%), Positives = 212/479 (44%), Gaps = 40/479 (8%)

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
           ++G   D +TY+ +V   G+  +   +++LL +M   G  P++ +YN L+ +Y     + 
Sbjct: 268 ESGIVPDINTYSYLVQTFGKLNRLEKVSELLREMECGGNLPDITSYNVLLEAYAELGSIK 327

Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
           EA+ VF+QMQ  GC  +  TY  L++++ K G  D   D++ +M+ +   PD  TY+++I
Sbjct: 328 EAMGVFRQMQAAGCVANAATYSVLLNLYGKHGRYDDVRDLFLEMKVSNTDPDAGTYNILI 387

Query: 473 NCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFE 532
              G+ G+ +    LF +M  +   PN+ TY  +I    K   Y+ A K+   M   G  
Sbjct: 388 QVFGEGGYFKEVVTLFHDMAEENVEPNMQTYEGLIFACGKGGLYEDAKKILLHMNEKGVV 447

Query: 533 PDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEW 592
           P    Y+ V+E  G     +EA  +F  M      P    Y  L+  + + G  ++A   
Sbjct: 448 PSSKAYTGVIEAFGQAALYEEALVMFNTMNEVGSNPTVETYNSLIHAFARGGLYKEAEAI 507

Query: 593 YEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSC-CT 651
              M ++GL+ +V + N ++ AF + GQ  +A      M     +P+  T   +LS  C+
Sbjct: 508 LSRMNESGLKRDVHSFNGVIEAFRQGGQYEEAVKSYVEMEKANCEPNELTLEAVLSIYCS 567

Query: 652 EARSPYDMGFCHELMAVSGHPAHM---FLLSMPSPGPDGQNVRDHVGSFLEMMHSE---- 704
                       E+ A    P+ M    +L++ +      +  + + + + M  S+    
Sbjct: 568 AGLVDEGEEQFQEIKASGILPSVMCYCMMLALYAKNDRLNDAYNLIDAMITMRVSDIHQV 627

Query: 705 ---------DRESKRGLVDAVVDFLHKSGL-------------------KEEAGSVWEVA 736
                    D ES   +V+ V D L+  G                    +E A  V   A
Sbjct: 628 IGQMIKGDFDDESNWQIVEYVFDKLNSEGCGLGMRFYNALLEALWCMFQRERAARVLNEA 687

Query: 737 AQKNVYPDAVKEKGMSYWLINLHVMSDGTAVIALSRTLAWFRKQMLISGVGPSRIDIVT 795
           +++ ++P+  ++  +  W +++H MS+G A+ ALS    W      +S  G    ++ T
Sbjct: 688 SKRGLFPELFRKSKL-VWSVDVHRMSEGGALTALS---VWLNNVHEMSMTGDDLPEVAT 742


>gi|297746120|emb|CBI16176.3| unnamed protein product [Vitis vinifera]
          Length = 819

 Score =  160 bits (405), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 131/481 (27%), Positives = 210/481 (43%), Gaps = 54/481 (11%)

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
           + GF   E   + +V  L +    G+   L++++ + G  P++  YN LI+S  +   L+
Sbjct: 313 EFGFVPSEAAVSNLVDGLRKKGNIGSAFDLVNKVKKFGVAPSLFVYNALINSMCKDGKLD 372

Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
           EA  +F  M   G  P+ VTY  LID   K G LDVA+    KM   G+    + YS +I
Sbjct: 373 EAESLFNNMGHKGLFPNDVTYSILIDSFCKRGKLDVALHFLGKMTEVGIKATVYPYSSLI 432

Query: 473 NCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFE 532
           +   K G L+AA  LF EM+  G  PN+V Y  +I+   K     +A +LY +M   G  
Sbjct: 433 SGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSLISGYCKEGELHNAFRLYHEMTGKGIS 492

Query: 533 PDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEW 592
           P+  T++ ++  L H   + EA  +F EM   N +P+E  Y +L++   K GN  +A+E 
Sbjct: 493 PNTYTFTALISGLCHANRMAEANKLFGEMVEWNVIPNEVTYNVLIEGHCKEGNTVRAFEL 552

Query: 593 YEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLL------QGMLN--LGLKPSLQTYT 644
            + M++ GL P+  T   L+S     G++S+A   +      Q  LN   G  P++ TYT
Sbjct: 553 LDEMVEKGLVPDTYTYRPLISGLCSTGRVSEAREFMNDLQGEQQKLNEIEGCLPNVVTYT 612

Query: 645 LLLS-CCTEARSPYDMGFCHELMAVSGHPAH----MFLLSMPSPGPDGQNVRDH------ 693
            L++  C           C E++A +  P       FL  + S G   + ++ H      
Sbjct: 613 ALINGLCKIGLMDKAELLCREMLASNSLPNQNTYACFLDYLTSEGNIEKAIQLHDVLLEG 672

Query: 694 -----------VGSFLEMMH-SEDRESKRGLVDA------------VVDFLHKSGLKEEA 729
                      +  F ++    E  E    ++D+            + ++  +  LK EA
Sbjct: 673 FLANTVTYNILIRGFCKLGRIQEAAEVLVNMIDSGISPDCISYSTIIYEYCRRGDLK-EA 731

Query: 730 GSVWEVAAQKNVYPDAVKEKGMSYWLINLHVMSDGTAVIALSRTLAWFRKQMLISGVGPS 789
             +WE    + V PD V    + Y          G  V          R  M+  GV P+
Sbjct: 732 IKLWESMLNRGVNPDTVAYNFLIY----------GCCVTGELTKAFELRDDMMRRGVKPN 781

Query: 790 R 790
           R
Sbjct: 782 R 782



 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 85/314 (27%), Positives = 153/314 (48%), Gaps = 10/314 (3%)

Query: 342 VALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRL 401
           VAL F   +  + G K   + Y++++    +  +  A   L D+M+ +G +PNVV Y  L
Sbjct: 408 VALHFLGKMT-EVGIKATVYPYSSLISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSL 466

Query: 402 IHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGL 461
           I  Y +   L+ A  ++ +M   G  P+  T+  LI     A  +  A  ++ +M    +
Sbjct: 467 ISGYCKEGELHNAFRLYHEMTGKGISPNTYTFTALISGLCHANRMAEANKLFGEMVEWNV 526

Query: 462 SPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALK 521
            P+  TY+V+I    K G+   A +L  EMV +G +P+  TY  +I+          A +
Sbjct: 527 IPNEVTYNVLIEGHCKEGNTVRAFELLDEMVEKGLVPDTYTYRPLISGLCSTGRVSEARE 586

Query: 522 LYRDMQN--------AGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVY 573
              D+Q          G  P+ VTY+ ++  L   G +D+AE +  EM   N +P++  Y
Sbjct: 587 FMNDLQGEQQKLNEIEGCLPNVVTYTALINGLCKIGLMDKAELLCREMLASNSLPNQNTY 646

Query: 574 GLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLN 633
              +D     GN+ KA + ++ +L+ G   N  T N L+  F ++G++ +A  +L  M++
Sbjct: 647 ACFLDYLTSEGNIEKAIQLHDVLLE-GFLANTVTYNILIRGFCKLGRIQEAAEVLVNMID 705

Query: 634 LGLKPSLQTYTLLL 647
            G+ P   +Y+ ++
Sbjct: 706 SGISPDCISYSTII 719



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 90/330 (27%), Positives = 150/330 (45%), Gaps = 12/330 (3%)

Query: 334 LKQLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQP 393
           L +++   +AL  F+ +   +G + D + YT +V  L   + F    +++ +M   GC  
Sbjct: 190 LIRIRQFRMALHLFDEIV-SSGLRPDVYVYTAVVRSLCELKDFIRAREVIGRMESSGCDL 248

Query: 394 NVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMY 453
           +V TYN  I    +   + EA+++   +   G   D  TYCTL+    K    +   +M 
Sbjct: 249 SVATYNVFIRGLCKNQRVWEAVEIKNLLSYKGLRADVGTYCTLVLGLCKVEEFEAGEEMM 308

Query: 454 KKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKA 513
            +M   G  P     S +++ L K G++ +A  L  ++   G  P+L  YN +I    K 
Sbjct: 309 NEMIEFGFVPSEAAVSNLVDGLRKKGNIGSAFDLVNKVKKFGVAPSLFVYNALINSMCKD 368

Query: 514 RNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVY 573
                A  L+ +M + G  P+ VTYSI+++     G LD A     +M           Y
Sbjct: 369 GKLDEAESLFNNMGHKGLFPNDVTYSILIDSFCKRGKLDVALHFLGKMTEVGIKATVYPY 428

Query: 574 GLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLN 633
             L+    K G +R A   ++ M+  GL+PNV    SL+S + + G+L +A+ L   M  
Sbjct: 429 SSLISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSLISGYCKEGELHNAFRLYHEMTG 488

Query: 634 LGLKPSLQTYTLLLSCCTEARSPYDMGFCH 663
            G+ P+  T+T L+S           G CH
Sbjct: 489 KGISPNTYTFTALIS-----------GLCH 507



 Score =  120 bits (300), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 83/303 (27%), Positives = 139/303 (45%), Gaps = 14/303 (4%)

Query: 365 TMVGILG---RARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQM 421
           T+ G+L    R RQF     L D++V  G +P+V  Y  ++ S         A +V  +M
Sbjct: 182 TLSGVLNGLIRIRQFRMALHLFDEIVSSGLRPDVYVYTAVVRSLCELKDFIRAREVIGRM 241

Query: 422 QVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHL 481
           +  GC+    TY   I    K   +  A+++   +   GL  D  TY  ++  L K    
Sbjct: 242 ESSGCDLSVATYNVFIRGLCKNQRVWEAVEIKNLLSYKGLRADVGTYCTLVLGLCKVEEF 301

Query: 482 QAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIV 541
           +A  ++  EM+  G +P+    + ++    K  N  SA  L   ++  G  P    Y+ +
Sbjct: 302 EAGEEMMNEMIEFGFVPSEAAVSNLVDGLRKKGNIGSAFDLVNKVKKFGVAPSLFVYNAL 361

Query: 542 MEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGL 601
           +  +   G LDEAE++F  M  K   P++  Y +L+D + K G +  A  +   M + G+
Sbjct: 362 INSMCKDGKLDEAESLFNNMGHKGLFPNDVTYSILIDSFCKRGKLDVALHFLGKMTEVGI 421

Query: 602 RPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGF 661
           +  V   +SL+S   ++G+L  A  L   M+  GLKP++  YT L+S           G+
Sbjct: 422 KATVYPYSSLISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSLIS-----------GY 470

Query: 662 CHE 664
           C E
Sbjct: 471 CKE 473



 Score =  115 bits (287), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 86/301 (28%), Positives = 143/301 (47%), Gaps = 22/301 (7%)

Query: 359 DEHTYTTMVGILGRARQFGAIN--KLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALD 416
           +E TY  +  I G  ++   +   +LLD+MV  G  P+  TY  LI        ++EA +
Sbjct: 529 NEVTYNVL--IEGHCKEGNTVRAFELLDEMVEKGLVPDTYTYRPLISGLCSTGRVSEARE 586

Query: 417 VFKQMQ--------VVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTY 468
               +Q        + GC P+ VTY  LI+   K G +D A  + ++M A+   P+  TY
Sbjct: 587 FMNDLQGEQQKLNEIEGCLPNVVTYTALINGLCKIGLMDKAELLCREMLASNSLPNQNTY 646

Query: 469 SVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQN 528
           +  ++ L   G+++ A QL  +++ +G + N VTYNI+I    K    Q A ++  +M +
Sbjct: 647 ACFLDYLTSEGNIEKAIQLH-DVLLEGFLANTVTYNILIRGFCKLGRIQEAAEVLVNMID 705

Query: 529 AGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRK 588
           +G  PD ++YS ++      G L EA  ++  M  +   PD   Y  L+      G + K
Sbjct: 706 SGISPDCISYSTIIYEYCRRGDLKEAIKLWESMLNRGVNPDTVAYNFLIYGCCVTGELTK 765

Query: 589 AWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
           A+E  + M++ G++PN  T NSL+     +  +S         LN         +  LLS
Sbjct: 766 AFELRDDMMRRGVKPNRATYNSLIHGTCLMSSVSSTADYFSCKLN---------WCFLLS 816

Query: 649 C 649
           C
Sbjct: 817 C 817



 Score = 98.2 bits (243), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 84/367 (22%), Positives = 160/367 (43%), Gaps = 25/367 (6%)

Query: 324 SMDAYQANQVLKQ-LQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQF------ 376
           ++  +   +VL Q L D  +AL FFN+L     F H   ++  ++  L ++  +      
Sbjct: 56  TLKPHHVEKVLIQTLDDSRLALRFFNFLGLHKNFDHSTTSFCILIHALVQSNLYWPASSL 115

Query: 377 ------------GAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVV 424
                       G     LD   R       + ++ LI +Y +     + L V + M   
Sbjct: 116 LQTLLLRGLNPEGLFESFLDSY-RKCNFSTTLGFDLLIQTYVQNRRELDGLVVVRLMMDC 174

Query: 425 GCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAA 484
           G  P   T   +++   +     +A+ ++ ++ ++GL PD + Y+ ++  L +      A
Sbjct: 175 GILPQIRTLSGVLNGLIRIRQFRMALHLFDEIVSSGLRPDVYVYTAVVRSLCELKDFIRA 234

Query: 485 HQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEV 544
            ++   M + GC  ++ TYN+ I    K +    A+++   +   G   D  TY  +  V
Sbjct: 235 REVIGRMESSGCDLSVATYNVFIRGLCKNQRVWEAVEIKNLLSYKGLRADVGTYCTL--V 292

Query: 545 LGHCGY--LDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLR 602
           LG C     +  E +  EM    +VP E     LVD   K GN+  A++    + + G+ 
Sbjct: 293 LGLCKVEEFEAGEEMMNEMIEFGFVPSEAAVSNLVDGLRKKGNIGSAFDLVNKVKKFGVA 352

Query: 603 PNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL-SCCTEARSPYDMGF 661
           P++   N+L+++  + G+L +A  L   M + GL P+  TY++L+ S C   +    + F
Sbjct: 353 PSLFVYNALINSMCKDGKLDEAESLFNNMGHKGLFPNDVTYSILIDSFCKRGKLDVALHF 412

Query: 662 CHELMAV 668
             ++  V
Sbjct: 413 LGKMTEV 419



 Score = 54.3 bits (129), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 37/139 (26%), Positives = 63/139 (45%), Gaps = 9/139 (6%)

Query: 335 KQLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPN 394
           K +Q H V L          GF  +  TY  ++    +  +     ++L  M+  G  P+
Sbjct: 661 KAIQLHDVLL---------EGFLANTVTYNILIRGFCKLGRIQEAAEVLVNMIDSGISPD 711

Query: 395 VVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYK 454
            ++Y+ +I+ Y R   L EA+ +++ M   G  PD V Y  LI      G L  A ++  
Sbjct: 712 CISYSTIIYEYCRRGDLKEAIKLWESMLNRGVNPDTVAYNFLIYGCCVTGELTKAFELRD 771

Query: 455 KMQAAGLSPDTFTYSVIIN 473
            M   G+ P+  TY+ +I+
Sbjct: 772 DMMRRGVKPNRATYNSLIH 790



 Score = 45.4 bits (106), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 49/262 (18%), Positives = 100/262 (38%), Gaps = 47/262 (17%)

Query: 491 MVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGY 550
           M++ G +P + T + ++    + R ++ AL L+ ++ ++G  PD   Y+ V+  L     
Sbjct: 171 MMDCGILPQIRTLSGVLNGLIRIRQFRMALHLFDEIVSSGLRPDVYVYTAVVRSLCELKD 230

Query: 551 LDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNS 610
              A  V   M           Y + +    K   V +A E    +   GLR +V T  +
Sbjct: 231 FIRAREVIGRMESSGCDLSVATYNVFIRGLCKNQRVWEAVEIKNLLSYKGLRADVGTYCT 290

Query: 611 LLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGFCHELMAVSG 670
           L+    +V +      ++  M+  G  PS    + L+                       
Sbjct: 291 LVLGLCKVEEFEAGEEMMNEMIEFGFVPSEAAVSNLV----------------------- 327

Query: 671 HPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRESKRGLV------DAVVDFLHKSG 724
                          DG   + ++GS  +++   ++  K G+       +A+++ + K G
Sbjct: 328 ---------------DGLRKKGNIGSAFDLV---NKVKKFGVAPSLFVYNALINSMCKDG 369

Query: 725 LKEEAGSVWEVAAQKNVYPDAV 746
             +EA S++     K ++P+ V
Sbjct: 370 KLDEAESLFNNMGHKGLFPNDV 391


>gi|242095042|ref|XP_002438011.1| hypothetical protein SORBIDRAFT_10g006490 [Sorghum bicolor]
 gi|241916234|gb|EER89378.1| hypothetical protein SORBIDRAFT_10g006490 [Sorghum bicolor]
          Length = 1443

 Score =  160 bits (405), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 90/298 (30%), Positives = 164/298 (55%), Gaps = 2/298 (0%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           R AG       +  M+G+  R+ +F    +LLD M   G  P++V++N LI++  ++  L
Sbjct: 213 RFAGEGATVQVFNAMMGVYARSGRFDDARQLLDTMHDRGIDPDLVSFNTLINARSKSGCL 272

Query: 412 NE--ALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYS 469
               ALD+  +++  G  PD +TY TLI   +++  L+ A+ ++++M A+   PD +TY+
Sbjct: 273 AAGVALDLLFEVRQSGLRPDVITYNTLISACSQSSNLEDAVTVFEEMIASECRPDLWTYN 332

Query: 470 VIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNA 529
            +++  G+ G  + A +LF E+V +G +P+ VTYN ++   AK  N         ++  A
Sbjct: 333 AMVSVHGRCGKAEEAERLFGELVEKGFMPDAVTYNSLLYAFAKEGNVDKVEHTCEELVKA 392

Query: 530 GFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKA 589
           GF+ +++TY+ ++ + G  G LD A  ++ EMR     PD   Y +++D  GK   + +A
Sbjct: 393 GFKKNEITYNTMIHMYGKMGRLDLAVGLYDEMRAVGCTPDAVTYTVMIDSLGKMDKIAEA 452

Query: 590 WEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
            +  E M  AGL+P +   ++L+ A+ + G+ +DA      M+  G+KP    Y ++L
Sbjct: 453 GKVLEDMADAGLKPTLVAFSALICAYAKGGRRADAEKTFDCMIASGVKPDRLAYLVML 510



 Score =  152 bits (384), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 92/341 (26%), Positives = 172/341 (50%), Gaps = 7/341 (2%)

Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLI 402
           AL  F WL R             ++G+LGRARQ     ++  +   +G    V  +N ++
Sbjct: 173 ALDAFEWLARSTA--PASRAVAVVLGVLGRARQDSIAEEVFLRFAGEGA--TVQVFNAMM 228

Query: 403 HSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFL--DVAMDMYKKMQAAG 460
             Y R+   ++A  +   M   G +PD V++ TLI+  +K+G L   VA+D+  +++ +G
Sbjct: 229 GVYARSGRFDDARQLLDTMHDRGIDPDLVSFNTLINARSKSGCLAAGVALDLLFEVRQSG 288

Query: 461 LSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSAL 520
           L PD  TY+ +I+   ++ +L+ A  +F EM+   C P+L TYN M+++  +    + A 
Sbjct: 289 LRPDVITYNTLISACSQSSNLEDAVTVFEEMIASECRPDLWTYNAMVSVHGRCGKAEEAE 348

Query: 521 KLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLW 580
           +L+ ++   GF PD VTY+ ++      G +D+ E    E+ +  +  +E  Y  ++ ++
Sbjct: 349 RLFGELVEKGFMPDAVTYNSLLYAFAKEGNVDKVEHTCEELVKAGFKKNEITYNTMIHMY 408

Query: 581 GKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSL 640
           GK G +  A   Y+ M   G  P+  T   ++ +  ++ ++++A  +L+ M + GLKP+L
Sbjct: 409 GKMGRLDLAVGLYDEMRAVGCTPDAVTYTVMIDSLGKMDKIAEAGKVLEDMADAGLKPTL 468

Query: 641 QTYTLLLSCCTEARSPYDMGFCHELMAVSG-HPAHMFLLSM 680
             ++ L+    +     D     + M  SG  P  +  L M
Sbjct: 469 VAFSALICAYAKGGRRADAEKTFDCMIASGVKPDRLAYLVM 509



 Score =  136 bits (343), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 80/280 (28%), Positives = 133/280 (47%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           RQ+G + D  TY T++    ++        + ++M+   C+P++ TYN ++  +GR    
Sbjct: 285 RQSGLRPDVITYNTLISACSQSSNLEDAVTVFEEMIASECRPDLWTYNAMVSVHGRCGKA 344

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
            EA  +F ++   G  PD VTY +L+   AK G +D      +++  AG   +  TY+ +
Sbjct: 345 EEAERLFGELVEKGFMPDAVTYNSLLYAFAKEGNVDKVEHTCEELVKAGFKKNEITYNTM 404

Query: 472 INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF 531
           I+  GK G L  A  L+ EM   GC P+ VTY +MI    K      A K+  DM +AG 
Sbjct: 405 IHMYGKMGRLDLAVGLYDEMRAVGCTPDAVTYTVMIDSLGKMDKIAEAGKVLEDMADAGL 464

Query: 532 EPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWE 591
           +P  V +S ++      G   +AE  F  M      PD   Y +++D++ ++G   K   
Sbjct: 465 KPTLVAFSALICAYAKGGRRADAEKTFDCMIASGVKPDRLAYLVMLDVFARSGETEKMLR 524

Query: 592 WYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGM 631
            Y  M+    RP+      LL A  +  +  +   ++Q M
Sbjct: 525 LYRTMMNDNYRPDDDMYQVLLVALAKEDKCEEIEEIIQDM 564



 Score =  136 bits (343), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 76/271 (28%), Positives = 134/271 (49%)

Query: 377 GAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTL 436
           G    LL ++ + G +P+V+TYN LI +  +++ L +A+ VF++M    C PD  TY  +
Sbjct: 275 GVALDLLFEVRQSGLRPDVITYNTLISACSQSSNLEDAVTVFEEMIASECRPDLWTYNAM 334

Query: 437 IDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGC 496
           + +H + G  + A  ++ ++   G  PD  TY+ ++    K G++        E+V  G 
Sbjct: 335 VSVHGRCGKAEEAERLFGELVEKGFMPDAVTYNSLLYAFAKEGNVDKVEHTCEELVKAGF 394

Query: 497 IPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEA 556
             N +TYN MI +  K      A+ LY +M+  G  PD VTY+++++ LG    + EA  
Sbjct: 395 KKNEITYNTMIHMYGKMGRLDLAVGLYDEMRAVGCTPDAVTYTVMIDSLGKMDKIAEAGK 454

Query: 557 VFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFL 616
           V  +M      P    +  L+  + K G    A + ++ M+ +G++P+      +L  F 
Sbjct: 455 VLEDMADAGLKPTLVAFSALICAYAKGGRRADAEKTFDCMIASGVKPDRLAYLVMLDVFA 514

Query: 617 RVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
           R G+      L + M+N   +P    Y +LL
Sbjct: 515 RSGETEKMLRLYRTMMNDNYRPDDDMYQVLL 545



 Score =  133 bits (335), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 109/494 (22%), Positives = 214/494 (43%), Gaps = 10/494 (2%)

Query: 356  FKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEAL 415
            FK  + T   M+    +A     + K+ + M   G  PN+  Y  +       N   +  
Sbjct: 846  FKISKSTVLLMLDAFAKAGDVFEVMKIYNGMKAAGYLPNMHLYRSMTSLLCHHNRFRDVE 905

Query: 416  DVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCL 475
             +  +M+  G +PD   + +L++++  AG  D    +Y+ +  AGL PD  TY+ +I   
Sbjct: 906  LMIAEMEGAGFKPDLSIFNSLLNMYTAAGNFDRTTQVYQSILEAGLEPDEDTYNTLIVMY 965

Query: 476  GKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDK 535
             ++   +    L  EM  +G  P L +Y  ++A  AKA   + A +L+ +M++  ++ ++
Sbjct: 966  CRSLRPEEGFTLLNEMGKRGLTPKLQSYKSLLAASAKAELREQADQLFEEMRSKSYQLNR 1025

Query: 536  VTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEA 595
              Y ++M++  + G   +AE + A M+     P      +L+  +G AG   +A     +
Sbjct: 1026 SIYHMMMKIYRNAGNHSKAENLLAVMKEDGIEPTIATMHILMTSYGTAGQPHEAENVLNS 1085

Query: 596  MLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARS 655
            +  + L  +    +++  A+L+ G        L  M   G++P  Q +T  +   +    
Sbjct: 1086 LKSSSLEVSTLPYSTVFDAYLKNGDYDLGIKKLLEMKRDGVEPDHQVWTCFIRAASLCEQ 1145

Query: 656  PYDMGFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRESKRGLVDA 715
              D     + +   G    + LL+  +P     ++   + ++LE + + +  +    V+A
Sbjct: 1146 TADAILLLKSLQDCGFDLPIRLLTERTP-----SLLSEIANYLEELEALEDSAALNFVNA 1200

Query: 716  VVDFLHKSGLKEEAGSVWEVAAQKNVYPDAVKEKGMSYWLINLHVMSDGTAVIALSRTLA 775
            V D L     +  A  ++++A ++++Y D V       W  +   +S G A++ L+  L 
Sbjct: 1201 VEDLLWAFECRATASRIFQLAVERSIYRDNVFRVAQKDWGADFRKLSAGAALVGLTLWLD 1260

Query: 776  WFRKQMLI-SGVGPSRIDIVTGWGRRSRVTGTSLVRQAVQELLHMFSFPFFTENGNSGCF 834
              +   L  S   P  + +VTG G  + V+    +R+ ++  L     PF      SG F
Sbjct: 1261 HMQDASLQGSPESPKSVVLVTGEGEYNMVS----LRKTIRAYLLEMGSPFLPCRARSGRF 1316

Query: 835  VGCGEPLNKWLLQS 848
            V     L  WL  S
Sbjct: 1317 VVKAYSLKMWLKDS 1330



 Score = 95.1 bits (235), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 52/175 (29%), Positives = 89/175 (50%)

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
           +AGFK +E TY TM+ + G+  +      L D+M   GC P+ VTY  +I S G+ + + 
Sbjct: 391 KAGFKKNEITYNTMIHMYGKMGRLDLAVGLYDEMRAVGCTPDAVTYTVMIDSLGKMDKIA 450

Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
           EA  V + M   G +P  V +  LI  +AK G    A   +  M A+G+ PD   Y V++
Sbjct: 451 EAGKVLEDMADAGLKPTLVAFSALICAYAKGGRRADAEKTFDCMIASGVKPDRLAYLVML 510

Query: 473 NCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQ 527
           +   ++G  +   +L+  M+N    P+   Y +++   AK    +   ++ +DM+
Sbjct: 511 DVFARSGETEKMLRLYRTMMNDNYRPDDDMYQVLLVALAKEDKCEEIEEIIQDME 565



 Score = 95.1 bits (235), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 82/388 (21%), Positives = 153/388 (39%), Gaps = 74/388 (19%)

Query: 338  QDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVT 397
            + H   L     +R       D  +  +++ +  +     A  +   +++      N   
Sbjct: 618  EKHEEGLSLLECIRDHVSSSQDLISECSIILLCRKQTSISAYEQYSQRLMLKYPGQNCNL 677

Query: 398  YNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVA-------- 449
            Y  LI     A   +EA  VF  MQ +G E  +  Y ++I  + K GF + A        
Sbjct: 678  YEHLITCLVEAELFSEACQVFCDMQFIGIEASKNIYESIISTYCKLGFPETAHGLMDDAL 737

Query: 450  ---------------MDMYKKM--------------QAAGLSPDTFTYSVIINCLGKAGH 480
                           ++ Y  +              QA+G+  D   ++ +I+   ++G 
Sbjct: 738  QSGIPLNILSCRVIIIEAYGNIKLWQQAEILVKGLRQASGI--DRRIWNALIHAYAESGL 795

Query: 481  LQAAHQLFCEMVNQGCIPNLVTYN-----------------------------------I 505
             + A  +F  M+  G +P + + N                                   +
Sbjct: 796  YEKARAVFDNMIKTGPLPTVDSVNGMMRALIVDGRLDELYVVVGELQDMDFKISKSTVLL 855

Query: 506  MIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKN 565
            M+   AKA +    +K+Y  M+ AG+ P+   Y  +  +L H     + E + AEM    
Sbjct: 856  MLDAFAKAGDVFEVMKIYNGMKAAGYLPNMHLYRSMTSLLCHHNRFRDVELMIAEMEGAG 915

Query: 566  WVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAY 625
            + PD  ++  L++++  AGN  +  + Y+++L+AGL P+  T N+L+  + R  +  + +
Sbjct: 916  FKPDLSIFNSLLNMYTAAGNFDRTTQVYQSILEAGLEPDEDTYNTLIVMYCRSLRPEEGF 975

Query: 626  HLLQGMLNLGLKPSLQTYTLLLSCCTEA 653
             LL  M   GL P LQ+Y  LL+   +A
Sbjct: 976  TLLNEMGKRGLTPKLQSYKSLLAASAKA 1003



 Score = 70.5 bits (171), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 65/311 (20%), Positives = 140/311 (45%), Gaps = 3/311 (0%)

Query: 369 ILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQV-VGCE 427
           IL +AR      KLL +    G +P+  +   ++++Y       E L + + ++  V   
Sbjct: 578 ILIKARCVSQGGKLLKKACLQGYKPDAKSLWSIMNAYVMTEKHEEGLSLLECIRDHVSSS 637

Query: 428 PDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQL 487
            D ++ C++I +  K   +       +++       +   Y  +I CL +A     A Q+
Sbjct: 638 QDLISECSIILLCRKQTSISAYEQYSQRLMLKYPGQNCNLYEHLITCLVEAELFSEACQV 697

Query: 488 FCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYS-IVMEVLG 546
           FC+M   G   +   Y  +I+   K    ++A  L  D   +G   + ++   I++E  G
Sbjct: 698 FCDMQFIGIEASKNIYESIISTYCKLGFPETAHGLMDDALQSGIPLNILSCRVIIIEAYG 757

Query: 547 HCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVP 606
           +     +AE +   +R+ + + D  ++  L+  + ++G   KA   ++ M++ G  P V 
Sbjct: 758 NIKLWQQAEILVKGLRQASGI-DRRIWNALIHAYAESGLYEKARAVFDNMIKTGPLPTVD 816

Query: 607 TCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGFCHELM 666
           + N ++ A +  G+L + Y ++  + ++  K S  T  L+L    +A   +++   +  M
Sbjct: 817 SVNGMMRALIVDGRLDELYVVVGELQDMDFKISKSTVLLMLDAFAKAGDVFEVMKIYNGM 876

Query: 667 AVSGHPAHMFL 677
             +G+  +M L
Sbjct: 877 KAAGYLPNMHL 887



 Score = 48.5 bits (114), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 56/226 (24%), Positives = 95/226 (42%), Gaps = 14/226 (6%)

Query: 533 PDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEW 592
           PD+V +  V+  +G   +    +A   E   ++  P      +++ + G+A     A E 
Sbjct: 155 PDEVAF--VVRAVGESSWRRALDAF--EWLARSTAPASRAVAVVLGVLGRARQDSIAEEV 210

Query: 593 YEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL----- 647
           +  +  AG    V   N+++  + R G+  DA  LL  M + G+ P L ++  L+     
Sbjct: 211 F--LRFAGEGATVQVFNAMMGVYARSGRFDDARQLLDTMHDRGIDPDLVSFNTLINARSK 268

Query: 648 SCCTEARSPYDMGFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRE 707
           S C  A    D+ F  E+      P  +   ++ S      N+ D V  F EM+ SE R 
Sbjct: 269 SGCLAAGVALDLLF--EVRQSGLRPDVITYNTLISACSQSSNLEDAVTVFEEMIASECR- 325

Query: 708 SKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAVKEKGMSY 753
                 +A+V    + G  EEA  ++    +K   PDAV    + Y
Sbjct: 326 PDLWTYNAMVSVHGRCGKAEEAERLFGELVEKGFMPDAVTYNSLLY 371


>gi|12320851|gb|AAG50561.1|AC073506_3 hypothetical protein [Arabidopsis thaliana]
          Length = 802

 Score =  160 bits (405), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 116/395 (29%), Positives = 189/395 (47%), Gaps = 20/395 (5%)

Query: 286 PFSRHFASTGNVVESVSR--ILRQW--------KWGPLAEEALGNTNYSMDAYQANQVLK 335
           P SR  A   +V E  SR  ++R+          W P  E  + N   S+   Q   VL+
Sbjct: 123 PQSREEAGRFDVEEDESRHPLVREVGRLIGLRSSWNPKHEGQMRNLLRSLKPSQVCAVLR 182

Query: 336 QLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNV 395
              D  VAL FF W  RQ  ++HD   Y +M+ +L + +      ++L  M R G     
Sbjct: 183 SQDDERVALKFFYWADRQWRYRHDPMVYYSMLEVLSKTKLCQGSRRVLVLMKRRGIYRTP 242

Query: 396 VTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKK 455
             ++R++ SY RA  L +AL V   MQ  G EP+ +   T ID+  +A  L+ A+   ++
Sbjct: 243 EAFSRVMVSYSRAGQLRDALKVLTLMQRAGVEPNLLICNTTIDVFVRANRLEKALRFLER 302

Query: 456 MQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARN 515
           MQ  G+ P+  TY+ +I        ++ A +L  +M ++GC+P+ V+Y  ++    K + 
Sbjct: 303 MQVVGIVPNVVTYNCMIRGYCDLHRVEEAIELLEDMHSKGCLPDKVSYYTIMGYLCKEKR 362

Query: 516 YQSALKLYRDM-QNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYG 574
                 L + M +  G  PD+VTY+ ++ +L    + DEA     + + K +  D+  Y 
Sbjct: 363 IVEVRDLMKKMAKEHGLVPDQVTYNTLIHMLTKHDHADEALWFLKDAQEKGFRIDKLGYS 422

Query: 575 LLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNL 634
            +V    K G + +A +    M      P+V T  ++++ F R+G++  A  LLQ M   
Sbjct: 423 AIVHALCKEGRMSEAKDLINEM---DCPPDVVTYTAVVNGFCRLGEVDKAKKLLQVMHTH 479

Query: 635 GLKPSLQTYTLLLS--CCT----EARSPYDMGFCH 663
           G KP+  +YT LL+  C T    EAR   +M   H
Sbjct: 480 GHKPNTVSYTALLNGMCRTGKSLEAREMMNMSEEH 514



 Score =  114 bits (284), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 80/310 (25%), Positives = 147/310 (47%), Gaps = 5/310 (1%)

Query: 326 DAYQANQVLKQLQDHTVALGFFNWLR--RQAGFKHDEHTYTTMVGILGRARQFGAINKLL 383
           D    N ++  L  H  A     +L+  ++ GF+ D+  Y+ +V  L +  +      L+
Sbjct: 382 DQVTYNTLIHMLTKHDHADEALWFLKDAQEKGFRIDKLGYSAIVHALCKEGRMSEAKDLI 441

Query: 384 DQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKA 443
           ++M    C P+VVTY  +++ + R   +++A  + + M   G +P+ V+Y  L++   + 
Sbjct: 442 NEM---DCPPDVVTYTAVVNGFCRLGEVDKAKKLLQVMHTHGHKPNTVSYTALLNGMCRT 498

Query: 444 GFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTY 503
           G    A +M    +    SP++ TYSVI++ L + G L  A  +  EMV +G  P  V  
Sbjct: 499 GKSLEAREMMNMSEEHWWSPNSITYSVIMHGLRREGKLSEACDVVREMVLKGFFPGPVEI 558

Query: 504 NIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRR 563
           N+++    +      A K   +  N G   + V ++ V+        LD A +V  +M  
Sbjct: 559 NLLLQSLCRDGRTHEARKFMEECLNKGCAINVVNFTTVIHGFCQNDELDAALSVLDDMYL 618

Query: 564 KNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSD 623
            N   D   Y  LVD  GK G + +A E  + ML  G+ P   T  +++  + ++G++ D
Sbjct: 619 INKHADVFTYTTLVDTLGKKGRIAEATELMKKMLHKGIDPTPVTYRTVIHRYCQMGKVDD 678

Query: 624 AYHLLQGMLN 633
              +L+ M++
Sbjct: 679 LVAILEKMIS 688



 Score =  112 bits (281), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 77/290 (26%), Positives = 134/290 (46%), Gaps = 4/290 (1%)

Query: 359 DEHTYTTMVGILGRARQFGAINKLLDQMVRD-GCQPNVVTYNRLIHSYGRANYLNEALDV 417
           D+ +Y T++G L + ++   +  L+ +M ++ G  P+ VTYN LIH   + ++ +EAL  
Sbjct: 346 DKVSYYTIMGYLCKEKRIVEVRDLMKKMAKEHGLVPDQVTYNTLIHMLTKHDHADEALWF 405

Query: 418 FKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGK 477
            K  Q  G   D++ Y  ++    K G +  A D+  +M      PD  TY+ ++N   +
Sbjct: 406 LKDAQEKGFRIDKLGYSAIVHALCKEGRMSEAKDLINEMDCP---PDVVTYTAVVNGFCR 462

Query: 478 AGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVT 537
            G +  A +L   M   G  PN V+Y  ++    +      A ++    +   + P+ +T
Sbjct: 463 LGEVDKAKKLLQVMHTHGHKPNTVSYTALLNGMCRTGKSLEAREMMNMSEEHWWSPNSIT 522

Query: 538 YSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAML 597
           YS++M  L   G L EA  V  EM  K + P      LL+    + G   +A ++ E  L
Sbjct: 523 YSVIMHGLRREGKLSEACDVVREMVLKGFFPGPVEINLLLQSLCRDGRTHEARKFMEECL 582

Query: 598 QAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
             G   NV    +++  F +  +L  A  +L  M  +     + TYT L+
Sbjct: 583 NKGCAINVVNFTTVIHGFCQNDELDAALSVLDDMYLINKHADVFTYTTLV 632



 Score = 75.5 bits (184), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 62/255 (24%), Positives = 108/255 (42%), Gaps = 37/255 (14%)

Query: 381 KLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIH 440
           K +++ +  GC  NVV +  +IH + + + L+ AL V   M ++    D  TY TL+D  
Sbjct: 576 KFMEECLNKGCAINVVNFTTVIHGFCQNDELDAALSVLDDMYLINKHADVFTYTTLVDTL 635

Query: 441 AKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNL 500
            K G +  A ++ KKM   G+ P   TY  +I+              +C+M   G + +L
Sbjct: 636 GKKGRIAEATELMKKMLHKGIDPTPVTYRTVIH-------------RYCQM---GKVDDL 679

Query: 501 VTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAE 560
           V      A+  K  + Q                 +  Y+ V+E L   G L+EA+ +  +
Sbjct: 680 V------AILEKMISRQKC---------------RTIYNQVIEKLCVLGKLEEADTLLGK 718

Query: 561 MRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQ 620
           + R     D      L++ + K G    A++    M    L P+V  C  L    +  G+
Sbjct: 719 VLRTASRSDAKTCYALMEGYLKKGVPLSAYKVACRMFNRNLIPDVKMCEKLSKRLVLKGK 778

Query: 621 LSDAYHLLQGMLNLG 635
           + +A  L+  ++  G
Sbjct: 779 VDEADKLMLRLVERG 793


>gi|224059754|ref|XP_002299984.1| predicted protein [Populus trichocarpa]
 gi|222847242|gb|EEE84789.1| predicted protein [Populus trichocarpa]
          Length = 610

 Score =  160 bits (405), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 118/440 (26%), Positives = 210/440 (47%), Gaps = 16/440 (3%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           G K    TY  ++  L +  ++     +L +M+  G  P+  TYN L+    R +  +EA
Sbjct: 183 GLKPSLFTYNAIINGLCKKGRYARAKGILIEMLNIGLSPDTTTYNTLLVESCRRDNFSEA 242

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
            ++F +M   G  PD V++ +LI + ++   LD A+  ++ M+  GL PD   Y+V+++ 
Sbjct: 243 KEIFGEMLRQGVVPDLVSFSSLIAVFSRNRHLDQALVYFRDMKKFGLVPDNVIYTVLMHG 302

Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPD 534
             + G++  A ++  EM+ QGC+ +++ YN ++    K +    A KL+ +M   G  PD
Sbjct: 303 YCRNGNMLEALKIRDEMLEQGCVLDVIAYNTILNGLCKEKMLTDADKLFDEMVERGALPD 362

Query: 535 KVTYSIVMEVLGHC--GYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEW 592
             T++ ++   GHC  G + +A ++F  M ++N  PD   Y  L+D + K G + KA E 
Sbjct: 363 FYTFTTLIH--GHCQDGNMTKALSLFGTMTQRNIKPDIVAYNTLIDGFCKVGEMEKASEL 420

Query: 593 YEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTY-TLLLSCCT 651
           ++ M+   + PN  T   L++A+  VG +S+A+ L   M+  G+KP+L T  T++   C 
Sbjct: 421 WDGMISRKIFPNHITYGILINAYCSVGHVSEAFRLWDVMIEKGIKPTLVTCNTVIKGYCR 480

Query: 652 EARSPYDMGFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRESKRG 711
              S     F   ++A    P H+   ++ +      N+ D    ++  M  E       
Sbjct: 481 SGDSSKADEFLGRMIAKGVAPDHISYNTLINGFVREDNM-DKAFLWINKMEKEGLLPDII 539

Query: 712 LVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAVKEKGMSYWLINLHVMSDGTAVIALS 771
             + V++   + G  +EA  V     +K + PD    +     LIN HV  D      L+
Sbjct: 540 TYNVVMNGFCRQGRMQEAELVLRKMIEKGINPD----RSTYTALINGHVTQDN-----LN 590

Query: 772 RTLAWFRKQMLISGVGPSRI 791
                F  +ML  G  P  +
Sbjct: 591 EAFR-FHDEMLQRGFAPDDV 609



 Score =  143 bits (360), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 79/263 (30%), Positives = 136/263 (51%)

Query: 385 QMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAG 444
           ++VR G + NV T N ++++  +    ++      +M+  G   D VTY TLI  + + G
Sbjct: 108 EVVRSGIELNVYTLNIMVNALCKDGKFDDVKSFLSEMEGNGIYADMVTYNTLIGAYCREG 167

Query: 445 FLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYN 504
            L+ A ++   M   GL P  FTY+ IIN L K G    A  +  EM+N G  P+  TYN
Sbjct: 168 LLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILIEMLNIGLSPDTTTYN 227

Query: 505 IMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRK 564
            ++    +  N+  A +++ +M   G  PD V++S ++ V     +LD+A   F +M++ 
Sbjct: 228 TLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLIAVFSRNRHLDQALVYFRDMKKF 287

Query: 565 NWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDA 624
             VPD  +Y +L+  + + GN+ +A +  + ML+ G   +V   N++L+   +   L+DA
Sbjct: 288 GLVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYNTILNGLCKEKMLTDA 347

Query: 625 YHLLQGMLNLGLKPSLQTYTLLL 647
             L   M+  G  P   T+T L+
Sbjct: 348 DKLFDEMVERGALPDFYTFTTLI 370



 Score =  102 bits (253), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 95/433 (21%), Positives = 176/433 (40%), Gaps = 36/433 (8%)

Query: 399 NRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQA 458
           N L+    + +++  A +V +++   G E +  T   +++   K G  D       +M+ 
Sbjct: 87  NSLLGGLVKIDWVELAWEVHREVVRSGIELNVYTLNIMVNALCKDGKFDDVKSFLSEMEG 146

Query: 459 AGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQS 518
            G+  D  TY+ +I    + G L+ A ++   M ++G  P+L TYN +I    K   Y  
Sbjct: 147 NGIYADMVTYNTLIGAYCREGLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYAR 206

Query: 519 ALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVD 578
           A  +  +M N G  PD  TY+ ++          EA+ +F EM R+  VPD   +  L+ 
Sbjct: 207 AKGILIEMLNIGLSPDTTTYNTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLIA 266

Query: 579 LWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKP 638
           ++ +  ++ +A  ++  M + GL P+      L+  + R G + +A  +   ML  G   
Sbjct: 267 VFSRNRHLDQALVYFRDMKKFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVL 326

Query: 639 SLQTYTLLLSCCTEARSPYDMGFCHELMAVSGHPAHMFLLSMPSPG--PDGQNVRDHVGS 696
            +  Y  +L+   + +   D     + M   G     +  +    G   DG N+   +  
Sbjct: 327 DVIAYNTILNGLCKEKMLTDADKLFDEMVERGALPDFYTFTTLIHGHCQDG-NMTKALSL 385

Query: 697 FLEMMHSEDRESKRGLV--DAVVDFLHKSGLKEEAGSVWEVAAQKNVYP----------- 743
           F  M     R  K  +V  + ++D   K G  E+A  +W+    + ++P           
Sbjct: 386 FGTMTQ---RNIKPDIVAYNTLIDGFCKVGEMEKASELWDGMISRKIFPNHITYGILINA 442

Query: 744 --------------DAVKEKGMSYWLINLHVMSDGTAVIALSRTLAWFRKQMLISGVGPS 789
                         D + EKG+   L+  + +  G      S     F  +M+  GV P 
Sbjct: 443 YCSVGHVSEAFRLWDVMIEKGIKPTLVTCNTVIKGYCRSGDSSKADEFLGRMIAKGVAPD 502

Query: 790 RID---IVTGWGR 799
            I    ++ G+ R
Sbjct: 503 HISYNTLINGFVR 515



 Score = 91.3 bits (225), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 63/232 (27%), Positives = 114/232 (49%), Gaps = 5/232 (2%)

Query: 341 TVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNR 400
           T AL  F  +  Q   K D   Y T++    +  +    ++L D M+     PN +TY  
Sbjct: 380 TKALSLFGTMT-QRNIKPDIVAYNTLIDGFCKVGEMEKASELWDGMISRKIFPNHITYGI 438

Query: 401 LIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAG 460
           LI++Y    +++EA  ++  M   G +P  VT  T+I  + ++G    A +   +M A G
Sbjct: 439 LINAYCSVGHVSEAFRLWDVMIEKGIKPTLVTCNTVIKGYCRSGDSSKADEFLGRMIAKG 498

Query: 461 LSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSAL 520
           ++PD  +Y+ +IN   +  ++  A     +M  +G +P+++TYN+++    +    Q A 
Sbjct: 499 VAPDHISYNTLINGFVREDNMDKAFLWINKMEKEGLLPDIITYNVVMNGFCRQGRMQEAE 558

Query: 521 KLYRDMQNAGFEPDKVTYSIVMEVLGHCGY--LDEAEAVFAEMRRKNWVPDE 570
            + R M   G  PD+ TY+ ++   GH     L+EA     EM ++ + PD+
Sbjct: 559 LVLRKMIEKGINPDRSTYTALIN--GHVTQDNLNEAFRFHDEMLQRGFAPDD 608



 Score = 70.5 bits (171), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 72/333 (21%), Positives = 131/333 (39%), Gaps = 28/333 (8%)

Query: 426 CEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAH 485
           C  + + +  LI  + +A  L    + ++ +++ G        + ++  L K   ++ A 
Sbjct: 44  CGTNNLVFDLLIRTYVQARKLREGTEAFRILRSKGYLVSINACNSLLGGLVKIDWVELAW 103

Query: 486 QLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVL 545
           ++  E+V  G   N+ T NIM+    K   +        +M+  G   D VTY+ ++   
Sbjct: 104 EVHREVVRSGIELNVYTLNIMVNALCKDGKFDDVKSFLSEMEGNGIYADMVTYNTLIGAY 163

Query: 546 GHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNV 605
              G L+EA  +   M  K   P    Y  +++   K G   +A      ML  GL P+ 
Sbjct: 164 CREGLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILIEMLNIGLSPDT 223

Query: 606 PTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGFCHEL 665
            T N+LL    R    S+A  +   ML  G+ P L +++ L++  +  R           
Sbjct: 224 TTYNTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLIAVFSRNRHL--------- 274

Query: 666 MAVSGHPAHMFLLSMPSPGPDGQNVRDHV--------GSFLEMMHSEDRESKRGLVDAVV 717
                  A ++   M   G    NV   V        G+ LE +   D   ++G V  V+
Sbjct: 275 -----DQALVYFRDMKKFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVI 329

Query: 718 DF------LHKSGLKEEAGSVWEVAAQKNVYPD 744
            +      L K  +  +A  +++   ++   PD
Sbjct: 330 AYNTILNGLCKEKMLTDADKLFDEMVERGALPD 362


>gi|354726093|emb|CCD31439.1| RNA processing factor 3 [Arabidopsis thaliana]
          Length = 629

 Score =  160 bits (405), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 96/297 (32%), Positives = 155/297 (52%), Gaps = 4/297 (1%)

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
           + G+K D  T+ T++  L    +      L+DQMV+ GCQP++VTY  +++   +   ++
Sbjct: 178 EMGYKPDTVTFNTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGAVVNGLCKRGDID 237

Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
            AL + K+M+    E D V Y T+ID   K   +D A  ++ KM+  G+ PD FTY+ +I
Sbjct: 238 LALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHIDDAFALFNKMETKGIRPDVFTYNSLI 297

Query: 473 NCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFE 532
           +CL   G    A +L   M+ +   PN+VT++ +I    K      A KLY +M     +
Sbjct: 298 SCLCNYGRWSDASRLLSNMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSID 357

Query: 533 PDKVTYSIVMEVLGHCGY--LDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAW 590
           PD  TYS ++   G C +  LDEA+ +F  M  K+  P+   Y  L+  + KA  V +  
Sbjct: 358 PDIFTYSSLIN--GFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGM 415

Query: 591 EWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
           E +  M Q GL  N  T N+L+    + G    A  + + M++ G+ P + TY++LL
Sbjct: 416 ELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILL 472



 Score =  149 bits (375), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 90/305 (29%), Positives = 155/305 (50%), Gaps = 1/305 (0%)

Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLI 402
           A   FN +  + G + D  TY +++  L    ++   ++LL  M+     PNVVT++ LI
Sbjct: 274 AFALFNKMETK-GIRPDVFTYNSLISCLCNYGRWSDASRLLSNMIERKINPNVVTFSALI 332

Query: 403 HSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLS 462
            ++ +   L EA  ++ +M     +PD  TY +LI+       LD A  M++ M +    
Sbjct: 333 DAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCF 392

Query: 463 PDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKL 522
           P+  TY+ +I    KA  ++   +LF EM  +G + N VTYN +I    +A +   A K+
Sbjct: 393 PNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKI 452

Query: 523 YRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGK 582
           ++ M + G  PD +TYSI+++ L   G L++A  VF  +++    PD   Y ++++   K
Sbjct: 453 FKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCK 512

Query: 583 AGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQT 642
           AG V   W+ + ++   G++PNV    +++S F R G   +A  L + M   G  P    
Sbjct: 513 AGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPDSGC 572

Query: 643 YTLLL 647
           Y  L+
Sbjct: 573 YNTLI 577



 Score =  147 bits (372), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 94/329 (28%), Positives = 159/329 (48%), Gaps = 18/329 (5%)

Query: 339 DHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTY 398
           D  +AL     + +    + D   Y T++  L + +       L ++M   G +P+V TY
Sbjct: 235 DIDLALSLLKKMEK-GKIEADVVIYNTIIDGLCKYKHIDDAFALFNKMETKGIRPDVFTY 293

Query: 399 NRLIH---SYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKK 455
           N LI    +YGR    ++A  +   M      P+ VT+  LID   K G L  A  +Y +
Sbjct: 294 NSLISCLCNYGR---WSDASRLLSNMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDE 350

Query: 456 MQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARN 515
           M    + PD FTYS +IN       L  A  +F  M+++ C PN+VTYN +I    KA+ 
Sbjct: 351 MIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKR 410

Query: 516 YQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGL 575
            +  ++L+R+M   G   + VTY+ +++ L   G  D A+ +F +M      PD   Y +
Sbjct: 411 VEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSI 470

Query: 576 LVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLG 635
           L+D   K G + KA   +E + ++ + P++ T N ++    + G++ D + L   +   G
Sbjct: 471 LLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKG 530

Query: 636 LKPSLQTYTLLLSCCTEARSPYDMGFCHE 664
           +KP++  YT ++S           GFC +
Sbjct: 531 VKPNVIIYTTMIS-----------GFCRK 548



 Score =  133 bits (334), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 77/293 (26%), Positives = 154/293 (52%)

Query: 362 TYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQM 421
           T++ ++    +  +     KL D+M++    P++ TY+ LI+ +   + L+EA  +F+ M
Sbjct: 327 TFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELM 386

Query: 422 QVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHL 481
               C P+ VTY TLI    KA  ++  M+++++M   GL  +T TY+ +I  L +AG  
Sbjct: 387 ISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDC 446

Query: 482 QAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIV 541
             A ++F +MV+ G  P+++TY+I++    K    + AL ++  +Q +  EPD  TY+I+
Sbjct: 447 DMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIM 506

Query: 542 MEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGL 601
           +E +   G +++   +F  +  K   P+  +Y  ++  + + G   +A   +  M + G 
Sbjct: 507 IEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGT 566

Query: 602 RPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEAR 654
            P+    N+L+ A LR G  + +  L++ M + G      T +++++   + R
Sbjct: 567 LPDSGCYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVINMLHDGR 619



 Score =  129 bits (324), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 78/267 (29%), Positives = 134/267 (50%), Gaps = 1/267 (0%)

Query: 359 DEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVF 418
           D  TY++++       +      + + M+   C PNVVTYN LI  + +A  + E +++F
Sbjct: 359 DIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELF 418

Query: 419 KQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKA 478
           ++M   G   + VTY TLI    +AG  D+A  ++KKM + G+ PD  TYS++++ L K 
Sbjct: 419 REMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKY 478

Query: 479 GHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTY 538
           G L+ A  +F  +      P++ TYNIMI    KA   +    L+  +   G +P+ + Y
Sbjct: 479 GKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIY 538

Query: 539 SIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQ 598
           + ++      G  +EA+A+F EM+    +PD   Y  L+    + G+   + E  + M  
Sbjct: 539 TTMISGFCRKGLKEEADALFREMKEDGTLPDSGCYNTLIRARLRDGDKAASAELIKEMRS 598

Query: 599 AGLRPNVPTCNSLLSAFLRVGQLSDAY 625
            G   +  T  S++   L  G+L  +Y
Sbjct: 599 CGFVGDASTI-SMVINMLHDGRLEKSY 624



 Score =  129 bits (323), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 104/398 (26%), Positives = 185/398 (46%), Gaps = 28/398 (7%)

Query: 363 YTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQ 422
           +  ++  + + ++F  +  L ++M       ++ +YN LI+ + R + L  AL V  +M 
Sbjct: 83  FNKLLSAIAKMKKFDLVISLGERMQNLRISYDLYSYNILINCFCRRSQLPLALAVLGKMM 142

Query: 423 VVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQ 482
            +G EPD VT  +L++ +  +  +  A+ +  +M   G  PDT T++ +I+ L       
Sbjct: 143 KLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTVTFNTLIHGLFLHNKAS 202

Query: 483 AAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVM 542
            A  L  +MV +GC P+LVTY  ++    K  +   AL L + M+    E D V Y+ ++
Sbjct: 203 EAVALVDQMVQRGCQPDLVTYGAVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTII 262

Query: 543 EVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLR 602
           + L    ++D+A A+F +M  K   PD   Y  L+      G    A      M++  + 
Sbjct: 263 DGLCKYKHIDDAFALFNKMETKGIRPDVFTYNSLISCLCNYGRWSDASRLLSNMIERKIN 322

Query: 603 PNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGFC 662
           PNV T ++L+ AF++ G+L +A  L   M+   + P + TY+ L++           GFC
Sbjct: 323 PNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLIN-----------GFC 371

Query: 663 -HELMAVSGHPAHMFLLSMPSPG-PDGQNVRDHVGSFLEMMHSED-----RE-SKRGLVD 714
            H+ +       HMF L +     P+       +  F +    E+     RE S+RGLV 
Sbjct: 372 MHDRL---DEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVG 428

Query: 715 AVVDF------LHKSGLKEEAGSVWEVAAQKNVYPDAV 746
             V +      L ++G  + A  +++      V PD +
Sbjct: 429 NTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDII 466



 Score = 98.6 bits (244), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 62/245 (25%), Positives = 120/245 (48%), Gaps = 1/245 (0%)

Query: 411 LNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSV 470
           L++A+ +F +M      P  V +  L+   AK    D+ + + ++MQ   +S D ++Y++
Sbjct: 61  LDDAIGLFGEMVQSRPLPSIVEFNKLLSAIAKMKKFDLVISLGERMQNLRISYDLYSYNI 120

Query: 471 IINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAG 530
           +INC  +   L  A  +  +M+  G  P++VT + ++     ++    A+ L   M   G
Sbjct: 121 LINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMG 180

Query: 531 FEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAW 590
           ++PD VT++ ++  L       EA A+  +M ++   PD   YG +V+   K G++  A 
Sbjct: 181 YKPDTVTFNTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGAVVNGLCKRGDIDLAL 240

Query: 591 EWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSC- 649
              + M +  +  +V   N+++    +   + DA+ L   M   G++P + TY  L+SC 
Sbjct: 241 SLLKKMEKGKIEADVVIYNTIIDGLCKYKHIDDAFALFNKMETKGIRPDVFTYNSLISCL 300

Query: 650 CTEAR 654
           C   R
Sbjct: 301 CNYGR 305



 Score = 97.4 bits (241), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 59/202 (29%), Positives = 107/202 (52%), Gaps = 1/202 (0%)

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
           Q G   +  TY T++  L +A       K+  +MV DG  P+++TY+ L+    +   L 
Sbjct: 423 QRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLE 482

Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
           +AL VF+ +Q    EPD  TY  +I+   KAG ++   D++  +   G+ P+   Y+ +I
Sbjct: 483 KALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMI 542

Query: 473 NCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFE 532
           +   + G  + A  LF EM   G +P+   YN +I  + +  +  ++ +L ++M++ GF 
Sbjct: 543 SGFCRKGLKEEADALFREMKEDGTLPDSGCYNTLIRARLRDGDKAASAELIKEMRSCGFV 602

Query: 533 PDKVTYSIVMEVLGHCGYLDEA 554
            D  T S+V+ +L H G L+++
Sbjct: 603 GDASTISMVINML-HDGRLEKS 623



 Score = 65.1 bits (157), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 61/289 (21%), Positives = 116/289 (40%), Gaps = 35/289 (12%)

Query: 481 LQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSI 540
           L  A  LF EMV    +P++V +N +++  AK + +   + L   MQN     D  +Y+I
Sbjct: 61  LDDAIGLFGEMVQSRPLPSIVEFNKLLSAIAKMKKFDLVISLGERMQNLRISYDLYSYNI 120

Query: 541 VMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAG 600
           ++        L  A AV  +M +  + PD      L++ +  +  +  A    + M++ G
Sbjct: 121 LINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMG 180

Query: 601 LRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMG 660
            +P+  T N+L+       + S+A  L+  M+  G +P L TY  +++           G
Sbjct: 181 YKPDTVTFNTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGAVVN-----------G 229

Query: 661 FCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRESKRGLVDAVVDFL 720
            C                         +   D   S L+ M     E+   + + ++D L
Sbjct: 230 LCK------------------------RGDIDLALSLLKKMEKGKIEADVVIYNTIIDGL 265

Query: 721 HKSGLKEEAGSVWEVAAQKNVYPDAVKEKGMSYWLINLHVMSDGTAVIA 769
            K    ++A +++     K + PD      +   L N    SD + +++
Sbjct: 266 CKYKHIDDAFALFNKMETKGIRPDVFTYNSLISCLCNYGRWSDASRLLS 314



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 37/168 (22%), Positives = 83/168 (49%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           G   D  TY+ ++  L +  +      + + + +   +P++ TYN +I    +A  + + 
Sbjct: 460 GVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDG 519

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
            D+F  + + G +P+ + Y T+I    + G  + A  ++++M+  G  PD+  Y+ +I  
Sbjct: 520 WDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPDSGCYNTLIRA 579

Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKL 522
             + G   A+ +L  EM + G + +  T +++I +    R  +S L++
Sbjct: 580 RLRDGDKAASAELIKEMRSCGFVGDASTISMVINMLHDGRLEKSYLEM 627


>gi|255565671|ref|XP_002523825.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223536913|gb|EEF38551.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 528

 Score =  160 bits (405), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 95/342 (27%), Positives = 160/342 (46%), Gaps = 38/342 (11%)

Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLI 402
           AL FFNW   + GF H    Y  M+ + G+ R F    +++D M     + ++ T++ LI
Sbjct: 125 ALSFFNWATSRPGFTHHPEPYNEMIDLAGKVRNFDLGWQVIDLMKARNVEISIETFSILI 184

Query: 403 HSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAK-------------------- 442
             Y RA   +EA+  F +M+   C+PD++ +  LI I  +                    
Sbjct: 185 RRYVRAGLASEAVHAFNRMEDYNCKPDKIAFSILISILCRKRRATEAQSFFDSLKDKFEP 244

Query: 443 --------------AGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLF 488
                         AG +  A  ++ +M+ AG  P+ +TY+++I+ L + G +  AH +F
Sbjct: 245 DVIVYTNLVRGWCRAGNIPEAERVFTEMKVAGCMPNVYTYTIVIDALCRCGQITRAHDVF 304

Query: 489 CEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHC 548
            EM++ GC PN +T+N ++ +  KA   +  L++Y  M+  G  PD VTY+ ++E   HC
Sbjct: 305 AEMLDVGCEPNSITFNNLLRVHVKAGRTEKVLQVYNQMKRMGCPPDTVTYNFLIE--SHC 362

Query: 549 --GYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVP 606
             G LDEA  V   M +K   P+   +  L     K  +V  A   Y  M +   + N  
Sbjct: 363 KDGNLDEALKVLNSMVKKGCSPNASTFNGLFGSIAKLRDVNGAHRLYAKMKELKCKANTV 422

Query: 607 TCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
           T N L+  F+          L + M    ++P++ TY +L++
Sbjct: 423 TYNILMRMFVDTKSTDMVLKLKKEMDEDDVEPNVNTYCVLIA 464



 Score =  159 bits (402), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 101/350 (28%), Positives = 172/350 (49%), Gaps = 14/350 (4%)

Query: 298 VESVSRILRQWKWGPLAEEALGNTNYSMDAYQAN----------QVLKQLQDHTVALGFF 347
           +E+ S ++R++    LA EA+   N  M+ Y              +L + +  T A  FF
Sbjct: 177 IETFSILIRRYVRAGLASEAVHAFN-RMEDYNCKPDKIAFSILISILCRKRRATEAQSFF 235

Query: 348 NWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGR 407
           + L+ +  F+ D   YT +V    RA       ++  +M   GC PNV TY  +I +  R
Sbjct: 236 DSLKDK--FEPDVIVYTNLVRGWCRAGNIPEAERVFTEMKVAGCMPNVYTYTIVIDALCR 293

Query: 408 ANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFT 467
              +  A DVF +M  VGCEP+ +T+  L+ +H KAG  +  + +Y +M+  G  PDT T
Sbjct: 294 CGQITRAHDVFAEMLDVGCEPNSITFNNLLRVHVKAGRTEKVLQVYNQMKRMGCPPDTVT 353

Query: 468 YSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQ 527
           Y+ +I    K G+L  A ++   MV +GC PN  T+N +    AK R+   A +LY  M+
Sbjct: 354 YNFLIESHCKDGNLDEALKVLNSMVKKGCSPNASTFNGLFGSIAKLRDVNGAHRLYAKMK 413

Query: 528 NAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVR 587
               + + VTY+I+M +       D    +  EM   +  P+   Y +L+ ++   G+  
Sbjct: 414 ELKCKANTVTYNILMRMFVDTKSTDMVLKLKKEMDEDDVEPNVNTYCVLIAMYCGMGHWN 473

Query: 588 KAWEWYEAMLQAG-LRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGL 636
            A++++  M++   L+P++P    +L    + GQL     L+  M++ G 
Sbjct: 474 NAYKFFREMVEEKCLKPSLPVYEKVLQQLRKAGQLKKHEELVAVMVDRGF 523


>gi|302803484|ref|XP_002983495.1| hypothetical protein SELMODRAFT_118272 [Selaginella moellendorffii]
 gi|300148738|gb|EFJ15396.1| hypothetical protein SELMODRAFT_118272 [Selaginella moellendorffii]
          Length = 561

 Score =  160 bits (405), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 104/311 (33%), Positives = 157/311 (50%), Gaps = 13/311 (4%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           GF+ D   Y T++  L ++R+     +L+  M+R GC P VVTYN L+  + R+  ++ A
Sbjct: 201 GFQPDVIMYNTLLNGLCKSRRLDEALELVQLMIRSGCYPTVVTYNSLMELFCRSKQVDRA 260

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
             + + M   GC PD + Y T+I    +   LD A  + K+M AA   PD  TYS II+ 
Sbjct: 261 FRLIQVMSERGCPPDVINYNTVIAGLCRDARLDDAQALLKQMVAARCVPDVITYSTIIDG 320

Query: 475 LGKAGH------LQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQN 528
           L K         L+AA ++   M   GC PN  TY ++I    +AR  Q AL L R M +
Sbjct: 321 LCKDWRVDADWKLEAACEILEMMKQTGCPPNAGTYAVVIEGLCRARKSQQALALLRRMID 380

Query: 529 AGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRK 588
           +   PD  ++S+V+  L     LD A  +F  M  +   P+   Y  L+D   K G V K
Sbjct: 381 SEVVPDLSSFSMVIGSLCKSHDLDAAYKIFGMMSERECKPNPVAYAALIDGLSKGGEVDK 440

Query: 589 AWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL- 647
           A   +E M+++  RP V T NS+L     VG++ +A  +++GM++    P   +Y  L+ 
Sbjct: 441 AVRVFELMVES-FRPGVATYNSVLDGLCGVGRIEEAVRMVEGMIHKECFPDGASYGALIR 499

Query: 648 -----SCCTEA 653
                SC  EA
Sbjct: 500 GLCRVSCVEEA 510



 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 93/321 (28%), Positives = 157/321 (48%), Gaps = 7/321 (2%)

Query: 359 DEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVF 418
           +E TY +++  L +A +     +LLD+M   G  P V  +N +I    +A    +AL  F
Sbjct: 29  NEFTYGSLIHGLCKAGKLDQAYELLDEMRDRGIPPGVAVHNGVIRGLCKAGRFGDALGYF 88

Query: 419 KQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLS-PDTFTYSVIINCLGK 477
           K +    C PD +T+  L+D   K+G ++ A  +++ M  +    P+  TY+ +IN L K
Sbjct: 89  KTVAGTKCTPDIITFNILVDALVKSGRVEEAFQIFESMHTSSQCLPNVVTYTTVINGLCK 148

Query: 478 AGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVT 537
            G L  A +L   M   GC PN++TY++++    KA        L ++M   GF+PD + 
Sbjct: 149 DGKLDRAIELLDLMNETGCCPNVITYSVLVEGLCKAGRTDKGFTLLQEMTRRGFQPDVIM 208

Query: 538 YSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAML 597
           Y+ ++  L     LDEA  +   M R    P    Y  L++L+ ++  V +A+   + M 
Sbjct: 209 YNTLLNGLCKSRRLDEALELVQLMIRSGCYPTVVTYNSLMELFCRSKQVDRAFRLIQVMS 268

Query: 598 QAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTY-TLLLSCCTEARSP 656
           + G  P+V   N++++   R  +L DA  LL+ M+     P + TY T++   C + R  
Sbjct: 269 ERGCPPDVINYNTVIAGLCRDARLDDAQALLKQMVAARCVPDVITYSTIIDGLCKDWRVD 328

Query: 657 YDMGF---CH--ELMAVSGHP 672
            D      C   E+M  +G P
Sbjct: 329 ADWKLEAACEILEMMKQTGCP 349



 Score =  140 bits (353), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 88/288 (30%), Positives = 148/288 (51%), Gaps = 5/288 (1%)

Query: 369 ILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEP 428
           +L RA Q G   +L  +   + C PN  TY  LIH   +A  L++A ++  +M+  G  P
Sbjct: 7   LLVRAGQHGQAVQLFRE---ERCVPNEFTYGSLIHGLCKAGKLDQAYELLDEMRDRGIPP 63

Query: 429 DRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLF 488
               +  +I    KAG    A+  +K +     +PD  T++++++ L K+G ++ A Q+F
Sbjct: 64  GVAVHNGVIRGLCKAGRFGDALGYFKTVAGTKCTPDIITFNILVDALVKSGRVEEAFQIF 123

Query: 489 CEM-VNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGH 547
             M  +  C+PN+VTY  +I    K      A++L   M   G  P+ +TYS+++E L  
Sbjct: 124 ESMHTSSQCLPNVVTYTTVINGLCKDGKLDRAIELLDLMNETGCCPNVITYSVLVEGLCK 183

Query: 548 CGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPT 607
            G  D+   +  EM R+ + PD  +Y  L++   K+  + +A E  + M+++G  P V T
Sbjct: 184 AGRTDKGFTLLQEMTRRGFQPDVIMYNTLLNGLCKSRRLDEALELVQLMIRSGCYPTVVT 243

Query: 608 CNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTY-TLLLSCCTEAR 654
            NSL+  F R  Q+  A+ L+Q M   G  P +  Y T++   C +AR
Sbjct: 244 YNSLMELFCRSKQVDRAFRLIQVMSERGCPPDVINYNTVIAGLCRDAR 291



 Score =  140 bits (353), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 114/416 (27%), Positives = 186/416 (44%), Gaps = 21/416 (5%)

Query: 343 ALGFFNWLRRQAGFKH--DEHTYTTMVGILGRARQFGAINKLLDQM-VRDGCQPNVVTYN 399
           ALG+F  +   AG K   D  T+  +V  L ++ +     ++ + M     C PNVVTY 
Sbjct: 84  ALGYFKTV---AGTKCTPDIITFNILVDALVKSGRVEEAFQIFESMHTSSQCLPNVVTYT 140

Query: 400 RLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAA 459
            +I+   +   L+ A+++   M   GC P+ +TY  L++   KAG  D    + ++M   
Sbjct: 141 TVINGLCKDGKLDRAIELLDLMNETGCCPNVITYSVLVEGLCKAGRTDKGFTLLQEMTRR 200

Query: 460 GLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSA 519
           G  PD   Y+ ++N L K+  L  A +L   M+  GC P +VTYN ++ L  +++    A
Sbjct: 201 GFQPDVIMYNTLLNGLCKSRRLDEALELVQLMIRSGCYPTVVTYNSLMELFCRSKQVDRA 260

Query: 520 LKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDL 579
            +L + M   G  PD + Y+ V+  L     LD+A+A+  +M     VPD   Y  ++D 
Sbjct: 261 FRLIQVMSERGCPPDVINYNTVIAGLCRDARLDDAQALLKQMVAARCVPDVITYSTIIDG 320

Query: 580 WGKAGNVRKAW------EWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLN 633
             K   V   W      E  E M Q G  PN  T   ++    R  +   A  LL+ M++
Sbjct: 321 LCKDWRVDADWKLEAACEILEMMKQTGCPPNAGTYAVVIEGLCRARKSQQALALLRRMID 380

Query: 634 LGLKPSLQTYTLLL-SCCT--EARSPYDM-GFCHELMAVSGHPAHMFLLSMPSPGPDGQN 689
             + P L ++++++ S C   +  + Y + G   E        A+  L+   S G +   
Sbjct: 381 SEVVPDLSSFSMVIGSLCKSHDLDAAYKIFGMMSERECKPNPVAYAALIDGLSKGGE--- 437

Query: 690 VRDHVGSFLEMMHSEDRESKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDA 745
             D      E+M    R       ++V+D L   G  EEA  + E    K  +PD 
Sbjct: 438 -VDKAVRVFELMVESFRPGV-ATYNSVLDGLCGVGRIEEAVRMVEGMIHKECFPDG 491



 Score =  114 bits (285), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 80/291 (27%), Positives = 142/291 (48%), Gaps = 7/291 (2%)

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGR----- 407
           + G   D   Y T++  L R  +      LL QMV   C P+V+TY+ +I    +     
Sbjct: 269 ERGCPPDVINYNTVIAGLCRDARLDDAQALLKQMVAARCVPDVITYSTIIDGLCKDWRVD 328

Query: 408 ANY-LNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTF 466
           A++ L  A ++ + M+  GC P+  TY  +I+   +A     A+ + ++M  + + PD  
Sbjct: 329 ADWKLEAACEILEMMKQTGCPPNAGTYAVVIEGLCRARKSQQALALLRRMIDSEVVPDLS 388

Query: 467 TYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDM 526
           ++S++I  L K+  L AA+++F  M  + C PN V Y  +I   +K      A++++  M
Sbjct: 389 SFSMVIGSLCKSHDLDAAYKIFGMMSERECKPNPVAYAALIDGLSKGGEVDKAVRVFELM 448

Query: 527 QNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNV 586
             + F P   TY+ V++ L   G ++EA  +   M  K   PD   YG L+    +   V
Sbjct: 449 VES-FRPGVATYNSVLDGLCGVGRIEEAVRMVEGMIHKECFPDGASYGALIRGLCRVSCV 507

Query: 587 RKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLK 637
            +A+E ++A+   G    V   N L++   +  +LSDA+ +   ++  G K
Sbjct: 508 EEAYELFQAVEAKGFAMEVGVYNVLVNELCKKKRLSDAHGVANKLIEAGYK 558



 Score = 93.2 bits (230), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 59/219 (26%), Positives = 112/219 (51%), Gaps = 4/219 (1%)

Query: 437 IDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGC 496
           +++  +AG    A+ ++++ +     P+ FTY  +I+ L KAG L  A++L  EM ++G 
Sbjct: 5   LNLLVRAGQHGQAVQLFREERCV---PNEFTYGSLIHGLCKAGKLDQAYELLDEMRDRGI 61

Query: 497 IPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEA 556
            P +  +N +I    KA  +  AL  ++ +      PD +T++I+++ L   G ++EA  
Sbjct: 62  PPGVAVHNGVIRGLCKAGRFGDALGYFKTVAGTKCTPDIITFNILVDALVKSGRVEEAFQ 121

Query: 557 VFAEMRRKN-WVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAF 615
           +F  M   +  +P+   Y  +++   K G + +A E  + M + G  PNV T + L+   
Sbjct: 122 IFESMHTSSQCLPNVVTYTTVINGLCKDGKLDRAIELLDLMNETGCCPNVITYSVLVEGL 181

Query: 616 LRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEAR 654
            + G+    + LLQ M   G +P +  Y  LL+   ++R
Sbjct: 182 CKAGRTDKGFTLLQEMTRRGFQPDVIMYNTLLNGLCKSR 220


>gi|297830278|ref|XP_002883021.1| hypothetical protein ARALYDRAFT_479138 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297328861|gb|EFH59280.1| hypothetical protein ARALYDRAFT_479138 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 504

 Score =  160 bits (405), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 92/296 (31%), Positives = 157/296 (53%), Gaps = 4/296 (1%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           GF+ +  TYTT++  L + R      ++ +QM  +G +PNVVTYN L+         ++A
Sbjct: 182 GFRPNVVTYTTLIHCLCKNRHLNHAVEIFNQMGDNGIRPNVVTYNSLVSGLCEIGRWSDA 241

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
             + + M   G +P+ +T+  LID   K G +  A ++YK M    + PD FTY+ +IN 
Sbjct: 242 AWLLRDMMKRGIQPNVITFTALIDAFVKVGKIMEAKELYKVMIQMSVYPDVFTYTALING 301

Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPD 534
           L   G L  A Q+F  M + G  PN VTY  +I    K++  +   K++ +M   G   +
Sbjct: 302 LCTYGRLDEARQMFYLMESNGYYPNEVTYTTLIHGFCKSKRVEDGTKIFYEMSQKGLVAN 361

Query: 535 KVTYSIVMEVLGHC--GYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEW 592
            +TY+++++  G+C  G  D A+ VF +M  +   PD   Y +L+D     G V KA   
Sbjct: 362 TITYTVLIQ--GYCLVGRPDVAQEVFNQMGSRRAPPDIRTYNVLLDGLCYNGYVEKALMI 419

Query: 593 YEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
           ++ M +  +  N+ T   ++    +VG++ DA+ L   + + G+KP++ TYT ++S
Sbjct: 420 FKYMRKREMDINIVTYTIIIQGMCKVGKVEDAFDLFCSLFSKGMKPNVITYTTMIS 475



 Score =  135 bits (339), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 78/285 (27%), Positives = 148/285 (51%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           G + +  TY ++V  L    ++     LL  M++ G QPNV+T+  LI ++ +   + EA
Sbjct: 217 GIRPNVVTYNSLVSGLCEIGRWSDAAWLLRDMMKRGIQPNVITFTALIDAFVKVGKIMEA 276

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
            +++K M  +   PD  TY  LI+     G LD A  M+  M++ G  P+  TY+ +I+ 
Sbjct: 277 KELYKVMIQMSVYPDVFTYTALINGLCTYGRLDEARQMFYLMESNGYYPNEVTYTTLIHG 336

Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPD 534
             K+  ++   ++F EM  +G + N +TY ++I           A +++  M +    PD
Sbjct: 337 FCKSKRVEDGTKIFYEMSQKGLVANTITYTVLIQGYCLVGRPDVAQEVFNQMGSRRAPPD 396

Query: 535 KVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYE 594
             TY+++++ L + GY+++A  +F  MR++    +   Y +++    K G V  A++ + 
Sbjct: 397 IRTYNVLLDGLCYNGYVEKALMIFKYMRKREMDINIVTYTIIIQGMCKVGKVEDAFDLFC 456

Query: 595 AMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPS 639
           ++   G++PNV T  +++S F R G + +A  L + M   G  P+
Sbjct: 457 SLFSKGMKPNVITYTTMISGFCRRGFIHEADALFKKMKEDGFLPN 501



 Score =  128 bits (322), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 86/323 (26%), Positives = 157/323 (48%), Gaps = 1/323 (0%)

Query: 325 MDAYQANQVLKQLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLD 384
           +D  +   V+ +++   V +  F  ++   G     +T   ++  + R+ Q    +  L 
Sbjct: 83  VDFTRLLSVIAKMKRFDVVISLFEQMQ-ILGISPVLYTCNIVMNCVCRSSQPCRASCFLG 141

Query: 385 QMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAG 444
           +M++ G +P++VT+  L+H +   N + +AL +F Q+  +G  P+ VTY TLI    K  
Sbjct: 142 KMMKLGFEPDLVTFTSLLHGFCHWNRIEDALALFDQIVGMGFRPNVVTYTTLIHCLCKNR 201

Query: 445 FLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYN 504
            L+ A++++ +M   G+ P+  TY+ +++ L + G    A  L  +M+ +G  PN++T+ 
Sbjct: 202 HLNHAVEIFNQMGDNGIRPNVVTYNSLVSGLCEIGRWSDAAWLLRDMMKRGIQPNVITFT 261

Query: 505 IMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRK 564
            +I    K      A +LY+ M      PD  TY+ ++  L   G LDEA  +F  M   
Sbjct: 262 ALIDAFVKVGKIMEAKELYKVMIQMSVYPDVFTYTALINGLCTYGRLDEARQMFYLMESN 321

Query: 565 NWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDA 624
            + P+E  Y  L+  + K+  V    + +  M Q GL  N  T   L+  +  VG+   A
Sbjct: 322 GYYPNEVTYTTLIHGFCKSKRVEDGTKIFYEMSQKGLVANTITYTVLIQGYCLVGRPDVA 381

Query: 625 YHLLQGMLNLGLKPSLQTYTLLL 647
             +   M +    P ++TY +LL
Sbjct: 382 QEVFNQMGSRRAPPDIRTYNVLL 404



 Score =  118 bits (296), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 86/316 (27%), Positives = 153/316 (48%), Gaps = 20/316 (6%)

Query: 411 LNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSV 470
            NEALD+F +M      P  V +  L+ + AK    DV + ++++MQ  G+SP  +T ++
Sbjct: 63  FNEALDLFTRMVHSRPLPSIVDFTRLLSVIAKMKRFDVVISLFEQMQILGISPVLYTCNI 122

Query: 471 IINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAG 530
           ++NC+ ++     A     +M+  G  P+LVT+  ++         + AL L+  +   G
Sbjct: 123 VMNCVCRSSQPCRASCFLGKMMKLGFEPDLVTFTSLLHGFCHWNRIEDALALFDQIVGMG 182

Query: 531 FEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAW 590
           F P+ VTY+ ++  L    +L+ A  +F +M      P+   Y  LV    + G    A 
Sbjct: 183 FRPNVVTYTTLIHCLCKNRHLNHAVEIFNQMGDNGIRPNVVTYNSLVSGLCEIGRWSDAA 242

Query: 591 EWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS-C 649
                M++ G++PNV T  +L+ AF++VG++ +A  L + M+ + + P + TYT L++  
Sbjct: 243 WLLRDMMKRGIQPNVITFTALIDAFVKVGKIMEAKELYKVMIQMSVYPDVFTYTALINGL 302

Query: 650 CT-----EARSPYDMGFCHELMAVSG-HPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHS 703
           CT     EAR  +       LM  +G +P  +   ++       + V D    F EM   
Sbjct: 303 CTYGRLDEARQMF------YLMESNGYYPNEVTYTTLIHGFCKSKRVEDGTKIFYEM--- 353

Query: 704 EDRESKRGLVDAVVDF 719
               S++GLV   + +
Sbjct: 354 ----SQKGLVANTITY 365



 Score =  117 bits (293), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 71/273 (26%), Positives = 133/273 (48%)

Query: 375 QFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYC 434
           QF     L  +MV     P++V + RL+    +    +  + +F+QMQ++G  P   T  
Sbjct: 62  QFNEALDLFTRMVHSRPLPSIVDFTRLLSVIAKMKRFDVVISLFEQMQILGISPVLYTCN 121

Query: 435 TLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQ 494
            +++   ++     A     KM   G  PD  T++ +++       ++ A  LF ++V  
Sbjct: 122 IVMNCVCRSSQPCRASCFLGKMMKLGFEPDLVTFTSLLHGFCHWNRIEDALALFDQIVGM 181

Query: 495 GCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEA 554
           G  PN+VTY  +I    K R+   A++++  M + G  P+ VTY+ ++  L   G   +A
Sbjct: 182 GFRPNVVTYTTLIHCLCKNRHLNHAVEIFNQMGDNGIRPNVVTYNSLVSGLCEIGRWSDA 241

Query: 555 EAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSA 614
             +  +M ++   P+   +  L+D + K G + +A E Y+ M+Q  + P+V T  +L++ 
Sbjct: 242 AWLLRDMMKRGIQPNVITFTALIDAFVKVGKIMEAKELYKVMIQMSVYPDVFTYTALING 301

Query: 615 FLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
               G+L +A  +   M + G  P+  TYT L+
Sbjct: 302 LCTYGRLDEARQMFYLMESNGYYPNEVTYTTLI 334



 Score =  105 bits (262), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 59/214 (27%), Positives = 110/214 (51%)

Query: 359 DEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVF 418
           D  TYT ++  L    +     ++   M  +G  PN VTY  LIH + ++  + +   +F
Sbjct: 291 DVFTYTALINGLCTYGRLDEARQMFYLMESNGYYPNEVTYTTLIHGFCKSKRVEDGTKIF 350

Query: 419 KQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKA 478
            +M   G   + +TY  LI  +   G  DVA +++ +M +    PD  TY+V+++ L   
Sbjct: 351 YEMSQKGLVANTITYTVLIQGYCLVGRPDVAQEVFNQMGSRRAPPDIRTYNVLLDGLCYN 410

Query: 479 GHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTY 538
           G+++ A  +F  M  +    N+VTY I+I    K    + A  L+  + + G +P+ +TY
Sbjct: 411 GYVEKALMIFKYMRKREMDINIVTYTIIIQGMCKVGKVEDAFDLFCSLFSKGMKPNVITY 470

Query: 539 SIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPV 572
           + ++      G++ EA+A+F +M+   ++P+E V
Sbjct: 471 TTMISGFCRRGFIHEADALFKKMKEDGFLPNESV 504



 Score = 95.1 bits (235), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 54/187 (28%), Positives = 96/187 (51%)

Query: 349 WLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRA 408
           +L    G+  +E TYTT++    ++++     K+  +M + G   N +TY  LI  Y   
Sbjct: 316 YLMESNGYYPNEVTYTTLIHGFCKSKRVEDGTKIFYEMSQKGLVANTITYTVLIQGYCLV 375

Query: 409 NYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTY 468
              + A +VF QM      PD  TY  L+D     G+++ A+ ++K M+   +  +  TY
Sbjct: 376 GRPDVAQEVFNQMGSRRAPPDIRTYNVLLDGLCYNGYVEKALMIFKYMRKREMDINIVTY 435

Query: 469 SVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQN 528
           ++II  + K G ++ A  LFC + ++G  PN++TY  MI+   +      A  L++ M+ 
Sbjct: 436 TIIIQGMCKVGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGFIHEADALFKKMKE 495

Query: 529 AGFEPDK 535
            GF P++
Sbjct: 496 DGFLPNE 502



 Score = 69.3 bits (168), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 62/266 (23%), Positives = 108/266 (40%), Gaps = 35/266 (13%)

Query: 480 HLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYS 539
               A  LF  MV+   +P++V +  ++++ AK + +   + L+  MQ  G  P   T +
Sbjct: 62  QFNEALDLFTRMVHSRPLPSIVDFTRLLSVIAKMKRFDVVISLFEQMQILGISPVLYTCN 121

Query: 540 IVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQA 599
           IVM  +        A     +M +  + PD   +  L+  +     +  A   ++ ++  
Sbjct: 122 IVMNCVCRSSQPCRASCFLGKMMKLGFEPDLVTFTSLLHGFCHWNRIEDALALFDQIVGM 181

Query: 600 GLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDM 659
           G RPNV T  +L+    +   L+ A  +   M + G++P++ TY  L+S   E     D 
Sbjct: 182 GFRPNVVTYTTLIHCLCKNRHLNHAVEIFNQMGDNGIRPNVVTYNSLVSGLCEIGRWSD- 240

Query: 660 GFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRESKRGLVDAVVDF 719
                        A   L  M   G     ++ +V +F              L+DA V  
Sbjct: 241 -------------AAWLLRDMMKRG-----IQPNVITF------------TALIDAFV-- 268

Query: 720 LHKSGLKEEAGSVWEVAAQKNVYPDA 745
             K G   EA  +++V  Q +VYPD 
Sbjct: 269 --KVGKIMEAKELYKVMIQMSVYPDV 292


>gi|115455297|ref|NP_001051249.1| Os03g0746400 [Oryza sativa Japonica Group]
 gi|113549720|dbj|BAF13163.1| Os03g0746400, partial [Oryza sativa Japonica Group]
          Length = 613

 Score =  160 bits (405), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 119/433 (27%), Positives = 202/433 (46%), Gaps = 7/433 (1%)

Query: 298 VESVSRILRQWKWGPLAEE-ALGNTNYSMDAYQANQVLKQL-QDHTVALGFFNWLRRQAG 355
           ++ VSRIL      P A   A+   +  +     +++L +   D   A GFF W+  Q G
Sbjct: 161 IDEVSRILSARFASPEAIMIAMDCCSVRVTGCLVDKILTRFSNDWVAAFGFFMWVGTQGG 220

Query: 356 FKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEAL 415
           + H   +Y  MV ILG+ +QF  +  L++QMV  G   +++T  +++     A+   EA+
Sbjct: 221 YCHCADSYDLMVDILGKFKQFDLMWGLINQMVEVGGLMSLMTMTKVMRRLAGASRWTEAI 280

Query: 416 DVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCL 475
           D F +M   G   D      L+D   K   +  A  ++++++   + PD  +++ +++  
Sbjct: 281 DAFHKMDRFGVVKDTKAMNVLLDTLCKERSVKRARGVFQELRGT-IPPDENSFNTLVHGW 339

Query: 476 GKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDK 535
            KA  L+ A     EM   G  P++VTY  ++      +++Q+   L  +M+     P+ 
Sbjct: 340 CKARMLKEALDTMEEMKQHGFSPSVVTYTSLVEAYCMEKDFQTVYALLDEMRKRRCPPNV 399

Query: 536 VTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEA 595
           VTY+I+M  LG  G   EA   F +++     PD   Y  L+ + G+AG +  A+   E 
Sbjct: 400 VTYTILMHALGKAGRTREALDTFDKLKEDGVAPDASFYNSLIYILGRAGRLEDAYSVVEE 459

Query: 596 MLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARS 655
           M   G+ PNV T N+L+SA     Q  +A  LL  M      P ++TYT LL  C + + 
Sbjct: 460 MRTTGIAPNVTTFNTLISAACDHSQAENALKLLVKMEEQSCNPDIKTYTPLLKLCCKRQW 519

Query: 656 PYDMGF--CHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRESKRGLV 713
              + F  CH            + L +     +G+  +  +  FLE M S+    K+   
Sbjct: 520 VKILLFLVCHMFRKDISPDFSTYTLLVSWLCRNGKVAQSCL--FLEEMVSKGFAPKQETF 577

Query: 714 DAVVDFLHKSGLK 726
           D V++ L K  L+
Sbjct: 578 DLVMEKLEKRNLQ 590


>gi|356562139|ref|XP_003549331.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16390,
           chloroplastic-like [Glycine max]
          Length = 689

 Score =  160 bits (405), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 129/586 (22%), Positives = 260/586 (44%), Gaps = 61/586 (10%)

Query: 299 ESVSRILRQWKWGPLAEEALGNTNYSMDAYQANQVLKQLQDHTVALGFFNWLRRQAGFKH 358
           E VS +L+   WG + E+             A  V+  + +  V     N+ +R+     
Sbjct: 118 EDVSLVLKDL-WGRVIEQ------------DAVIVINNMSNPRVVPFVLNYFQRRIRPTR 164

Query: 359 DEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVF 418
           +   Y   + +  +++   A+ KL D+M++ G +P+ V+++ +I      +  N+A++ F
Sbjct: 165 EVILYNVTLKVFRKSKDLDAMEKLFDEMLQRGVRPDNVSFSTIISCARICSLPNKAVEWF 224

Query: 419 KQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAM---------------------------- 450
           ++M    CEPD VTY  +ID + +AG +D+A+                            
Sbjct: 225 EKMPSFRCEPDDVTYSAMIDAYGRAGNIDMALRLYDRARTEKWRLDSVTFSTLIKMYGLA 284

Query: 451 -------DMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTY 503
                  ++Y++M+A G+  +   Y+ +++ +G+A     A  ++ EM N G +PN  TY
Sbjct: 285 GNYDGCLNVYQEMKALGVKSNMVIYNTLLDAMGRAKRPWQAKSIYTEMTNNGFLPNWATY 344

Query: 504 NIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRR 563
             ++    + R  + AL +Y++M+  G E +   Y+ ++ +    G  D+A  +F +M+ 
Sbjct: 345 ASLLRAYGRGRYSEDALFVYKEMKEKGMEMNTHLYNTLLAMCADLGLADDAFKIFEDMKS 404

Query: 564 K-NWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLS 622
               + D   +  L+ ++  +GNV +A      M+++G +P +    SL+  + +VG+  
Sbjct: 405 SATCLCDSWTFSSLITIYSCSGNVSEAERMLNEMIESGFQPTIFVLTSLVQCYGKVGRTD 464

Query: 623 DAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGFCHELMAVSGHPAHMFLLSMPS 682
           D       +L+LG+ P  +    LL+  T+     ++G  ++ +  +       L  +  
Sbjct: 465 DVLKTFNQLLDLGISPDDRFCGCLLNVMTQTPKE-ELGKLNDCVEKANPKLGSVLRYLVE 523

Query: 683 PGPDGQNVRDHVGSFLEMMHSEDRESKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVY 742
              +G        S  E+ +S   E K+   ++++D      L ++A  + ++     +Y
Sbjct: 524 GLEEGDGEFRKEAS--ELFNSIADEVKKPFCNSLIDLCVNLNLLDKACELLDLGLTLEIY 581

Query: 743 PDAVKEKGMSYWLINLHVMSDGTAVIALSRTLAWFR--KQMLISGVG-PSRIDIVTGWGR 799
            D ++ K  + W ++L  +S G ++ AL    AW     + L SG   P  + I TG G+
Sbjct: 582 TD-IQSKSQTQWSLHLKSLSLGASLTALH---AWINDLSKTLESGEDLPPLLGINTGHGK 637

Query: 800 RSRVTGTSLVRQAVQELLHMFSFPFFTENGNSGCFVGCGEPLNKWL 845
             R +   L    V+  L+  + PF      +G F+        WL
Sbjct: 638 H-RYSDKGLA-NVVESHLNELNAPFHEAPDKAGWFLTTQVAAKSWL 681


>gi|302820365|ref|XP_002991850.1| hypothetical protein SELMODRAFT_134282 [Selaginella moellendorffii]
 gi|300140388|gb|EFJ07112.1| hypothetical protein SELMODRAFT_134282 [Selaginella moellendorffii]
          Length = 425

 Score =  160 bits (405), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 94/294 (31%), Positives = 145/294 (49%)

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
           + G + D      ++  LG+A       KL   M   GC  +  TY  LI S GR     
Sbjct: 77  KTGLEPDTLLCNVVLDGLGKANMMDEACKLFASMKSMGCPADDYTYAILIRSLGRCKRDE 136

Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
           EA  +F +M+  GC P    Y  +IDI+ KAG ++ AM + KKM    L+PD +T + +I
Sbjct: 137 EATLLFDEMEERGCTPSAPAYTNVIDIYCKAGRIESAMVVLKKMLDKNLAPDDYTLNSLI 196

Query: 473 NCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFE 532
             + + G  + A ++F  M   G   N V++N M+    KA     A +   +M+  G +
Sbjct: 197 TAVSRTGRTELACEIFERMKKSGVAVNTVSFNAMLDCCGKAGKVGLAYQFMDEMEARGIK 256

Query: 533 PDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEW 592
           P+ +T++ ++  LG   Y  EA  V  EMR     PD   Y  +++ + KAGN+ KA+E 
Sbjct: 257 PNSITFNTLINCLGRAKYASEAYKVLQEMRSAGLTPDVFTYTCMIEAFAKAGNMGKAFEM 316

Query: 593 YEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLL 646
           +  M +AG   NV T N L+ A ++ G+  DA  +   M   G+ P   T T+L
Sbjct: 317 FGDMEKAGCSANVVTYNLLIDALVKAGRYQDARDIYFDMKKKGILPDAITATVL 370



 Score =  145 bits (367), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 95/360 (26%), Positives = 177/360 (49%), Gaps = 8/360 (2%)

Query: 391 CQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAM 450
           C+ +V+  N +I +YGR++ +++ +D F+++   G +P+  TY  +I    KAG + +AM
Sbjct: 10  CRYHVLVSNAVIAAYGRSSRIHKVMDEFQELDKHGSKPNAYTYKCVIQSLVKAGNVVLAM 69

Query: 451 DMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQ 510
           ++  KM   GL PDT   +V+++ LGKA  +  A +LF  M + GC  +  TY I+I   
Sbjct: 70  ELLDKMIKTGLEPDTLLCNVVLDGLGKANMMDEACKLFASMKSMGCPADDYTYAILIRSL 129

Query: 511 AKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDE 570
            + +  + A  L+ +M+  G  P    Y+ V+++    G ++ A  V  +M  KN  PD+
Sbjct: 130 GRCKRDEEATLLFDEMEERGCTPSAPAYTNVIDIYCKAGRIESAMVVLKKMLDKNLAPDD 189

Query: 571 PVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQG 630
                L+    + G    A E +E M ++G+  N  + N++L    + G++  AY  +  
Sbjct: 190 YTLNSLITAVSRTGRTELACEIFERMKKSGVAVNTVSFNAMLDCCGKAGKVGLAYQFMDE 249

Query: 631 MLNLGLKPSLQTYTLLLSCCTEARSPYDMGFCHELMAVSGHPAHMFLLS-MPSPGPDGQN 689
           M   G+KP+  T+  L++C   A+   +     + M  +G    +F  + M        N
Sbjct: 250 MEARGIKPNSITFNTLINCLGRAKYASEAYKVLQEMRSAGLTPDVFTYTCMIEAFAKAGN 309

Query: 690 VRDHVGSFLEMMHSEDRESKRGLV---DAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAV 746
               +G   EM    ++      V   + ++D L K+G  ++A  ++    +K + PDA+
Sbjct: 310 ----MGKAFEMFGDMEKAGCSANVVTYNLLIDALVKAGRYQDARDIYFDMKKKGILPDAI 365



 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 75/260 (28%), Positives = 138/260 (53%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           +  G   D++TY  ++  LGR ++      L D+M   GC P+   Y  +I  Y +A  +
Sbjct: 111 KSMGCPADDYTYAILIRSLGRCKRDEEATLLFDEMEERGCTPSAPAYTNVIDIYCKAGRI 170

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
             A+ V K+M      PD  T  +LI   ++ G  ++A +++++M+ +G++ +T +++ +
Sbjct: 171 ESAMVVLKKMLDKNLAPDDYTLNSLITAVSRTGRTELACEIFERMKKSGVAVNTVSFNAM 230

Query: 472 INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF 531
           ++C GKAG +  A+Q   EM  +G  PN +T+N +I    +A+    A K+ ++M++AG 
Sbjct: 231 LDCCGKAGKVGLAYQFMDEMEARGIKPNSITFNTLINCLGRAKYASEAYKVLQEMRSAGL 290

Query: 532 EPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWE 591
            PD  TY+ ++E     G + +A  +F +M +     +   Y LL+D   KAG  + A +
Sbjct: 291 TPDVFTYTCMIEAFAKAGNMGKAFEMFGDMEKAGCSANVVTYNLLIDALVKAGRYQDARD 350

Query: 592 WYEAMLQAGLRPNVPTCNSL 611
            Y  M + G+ P+  T   L
Sbjct: 351 IYFDMKKKGILPDAITATVL 370



 Score =  126 bits (316), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 62/201 (30%), Positives = 113/201 (56%), Gaps = 4/201 (1%)

Query: 359 DEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVF 418
           D++T  +++  + R  +     ++ ++M + G   N V++N ++   G+A  +  A    
Sbjct: 188 DDYTLNSLITAVSRTGRTELACEIFERMKKSGVAVNTVSFNAMLDCCGKAGKVGLAYQFM 247

Query: 419 KQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKA 478
            +M+  G +P+ +T+ TLI+   +A +   A  + ++M++AGL+PD FTY+ +I    KA
Sbjct: 248 DEMEARGIKPNSITFNTLINCLGRAKYASEAYKVLQEMRSAGLTPDVFTYTCMIEAFAKA 307

Query: 479 GHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTY 538
           G++  A ++F +M   GC  N+VTYN++I    KA  YQ A  +Y DM+  G  PD +T 
Sbjct: 308 GNMGKAFEMFGDMEKAGCSANVVTYNLLIDALVKAGRYQDARDIYFDMKKKGILPDAITA 367

Query: 539 SIVMEVLGHCGY----LDEAE 555
           +++ ++ G C      LDE E
Sbjct: 368 TVLQQLAGKCKLSGISLDENE 388



 Score =  111 bits (277), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 59/198 (29%), Positives = 107/198 (54%), Gaps = 4/198 (2%)

Query: 320 NTNYSMDAYQANQVLKQLQDH---TVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQF 376
           + N + D Y  N ++  +       +A   F  +++ +G   +  ++  M+   G+A + 
Sbjct: 182 DKNLAPDDYTLNSLITAVSRTGRTELACEIFERMKK-SGVAVNTVSFNAMLDCCGKAGKV 240

Query: 377 GAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTL 436
           G   + +D+M   G +PN +T+N LI+  GRA Y +EA  V ++M+  G  PD  TY  +
Sbjct: 241 GLAYQFMDEMEARGIKPNSITFNTLINCLGRAKYASEAYKVLQEMRSAGLTPDVFTYTCM 300

Query: 437 IDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGC 496
           I+  AKAG +  A +M+  M+ AG S +  TY+++I+ L KAG  Q A  ++ +M  +G 
Sbjct: 301 IEAFAKAGNMGKAFEMFGDMEKAGCSANVVTYNLLIDALVKAGRYQDARDIYFDMKKKGI 360

Query: 497 IPNLVTYNIMIALQAKAR 514
           +P+ +T  ++  L  K +
Sbjct: 361 LPDAITATVLQQLAGKCK 378



 Score = 63.2 bits (152), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 39/134 (29%), Positives = 61/134 (45%), Gaps = 17/134 (12%)

Query: 318 LGNTNYSMDAYQANQVLKQLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFG 377
           LG   Y+ +AY+   VL+++              R AG   D  TYT M+    +A   G
Sbjct: 269 LGRAKYASEAYK---VLQEM--------------RSAGLTPDVFTYTCMIEAFAKAGNMG 311

Query: 378 AINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLI 437
              ++   M + GC  NVVTYN LI +  +A    +A D++  M+  G  PD +T   L 
Sbjct: 312 KAFEMFGDMEKAGCSANVVTYNLLIDALVKAGRYQDARDIYFDMKKKGILPDAITATVLQ 371

Query: 438 DIHAKAGFLDVAMD 451
            +  K     +++D
Sbjct: 372 QLAGKCKLSGISLD 385


>gi|223948189|gb|ACN28178.1| unknown [Zea mays]
 gi|413935735|gb|AFW70286.1| hypothetical protein ZEAMMB73_980179 [Zea mays]
          Length = 597

 Score =  160 bits (404), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 81/302 (26%), Positives = 158/302 (52%), Gaps = 4/302 (1%)

Query: 357 KHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALD 416
           + +  TYT M+ + G+A Q  +  ++  +M   GC+PN+ TY  L++++ R     +A +
Sbjct: 274 RTNTETYTLMINVYGKANQPMSSLRVFREMKSVGCKPNICTYTALVNAFAREGLCEKAEE 333

Query: 417 VFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLG 476
           VF++MQ  G EPD   Y  L++ +++AG    A +++  M+  G  PD  +Y+++++  G
Sbjct: 334 VFEEMQQAGHEPDVYAYNALMEAYSRAGLPQGASEIFSLMEHMGCEPDRASYNILVDAFG 393

Query: 477 KAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKV 536
           +AG  Q A   F E+  QG  P + ++ ++++  A++ N     ++   +  +G  PD  
Sbjct: 394 RAGLHQEAEAAFQELKQQGMRPTMKSHMLLLSAHARSGNVARCEEVMAQLHKSGLRPDTF 453

Query: 537 TYSIVMEVLGHCGYLDEAEAVFAEMRRKNWV----PDEPVYGLLVDLWGKAGNVRKAWEW 592
             + ++   G  G LD+ E +FA M R +      PD   Y ++V+ +G+AG + +    
Sbjct: 454 ALNAMLNAYGRAGRLDDMERLFAAMERGDGAIAGAPDTSTYNVMVNAYGRAGYLDRMEAA 513

Query: 593 YEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTE 652
           + ++   GL  +V T  S + A+ R  +      + + M++ G  P   T  +LL+ C++
Sbjct: 514 FRSLAARGLAADVVTWTSRIGAYARKKEYGQCLRVFEEMVDAGCYPDAGTAKVLLAACSD 573

Query: 653 AR 654
            R
Sbjct: 574 ER 575



 Score =  148 bits (374), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 112/411 (27%), Positives = 189/411 (45%), Gaps = 22/411 (5%)

Query: 348 NWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGR 407
            W+ R++ F+ D   Y  ++   G+ RQ          ++   C P   TY  L+ +Y  
Sbjct: 160 EWVLRRSSFRPDIICYNLLIDAYGQKRQLSEAEAAYMALLEARCVPTEDTYALLLRAYCG 219

Query: 408 ANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFT 467
           +  L+ A  V  +MQ  G  P    Y   +D   KA   + A+++Y++M+      +T T
Sbjct: 220 SGQLHRAEGVISEMQRNGIPPTATVYNAYLDGLLKARCSEKAVEVYQRMKKERCRTNTET 279

Query: 468 YSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQ 527
           Y+++IN  GKA    ++ ++F EM + GC PN+ TY  ++   A+    + A +++ +MQ
Sbjct: 280 YTLMINVYGKANQPMSSLRVFREMKSVGCKPNICTYTALVNAFAREGLCEKAEEVFEEMQ 339

Query: 528 NAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVR 587
            AG EPD   Y+ +ME     G    A  +F+ M      PD   Y +LVD +G+AG  +
Sbjct: 340 QAGHEPDVYAYNALMEAYSRAGLPQGASEIFSLMEHMGCEPDRASYNILVDAFGRAGLHQ 399

Query: 588 KAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
           +A   ++ + Q G+RP + +   LLSA  R G ++    ++  +   GL+P       +L
Sbjct: 400 EAEAAFQELKQQGMRPTMKSHMLLLSAHARSGNVARCEEVMAQLHKSGLRPDTFALNAML 459

Query: 648 SCCTEARSPYDMGFCHELM-----AVSGHP-AHMFLLSMPSPGPDGQNVRDHVGSFLEMM 701
           +    A    DM      M     A++G P    + + + + G  G         +L+ M
Sbjct: 460 NAYGRAGRLDDMERLFAAMERGDGAIAGAPDTSTYNVMVNAYGRAG---------YLDRM 510

Query: 702 HSEDRE-SKRGLVDAVVDFLHKSGL---KEEAGS---VWEVAAQKNVYPDA 745
            +  R  + RGL   VV +  + G    K+E G    V+E       YPDA
Sbjct: 511 EAAFRSLAARGLAADVVTWTSRIGAYARKKEYGQCLRVFEEMVDAGCYPDA 561



 Score = 90.1 bits (222), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 56/251 (22%), Positives = 111/251 (44%), Gaps = 39/251 (15%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           +QAG + D + Y  ++    RA      +++   M   GC+P+  +YN L+ ++GRA   
Sbjct: 339 QQAGHEPDVYAYNALMEAYSRAGLPQGASEIFSLMEHMGCEPDRASYNILVDAFGRAGLH 398

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTF----- 466
            EA   F++++  G  P   ++  L+  HA++G +    ++  ++  +GL PDTF     
Sbjct: 399 QEAEAAFQELKQQGMRPTMKSHMLLLSAHARSGNVARCEEVMAQLHKSGLRPDTFALNAM 458

Query: 467 ----------------------------------TYSVIINCLGKAGHLQAAHQLFCEMV 492
                                             TY+V++N  G+AG+L      F  + 
Sbjct: 459 LNAYGRAGRLDDMERLFAAMERGDGAIAGAPDTSTYNVMVNAYGRAGYLDRMEAAFRSLA 518

Query: 493 NQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLD 552
            +G   ++VT+   I   A+ + Y   L+++ +M +AG  PD  T  +++        ++
Sbjct: 519 ARGLAADVVTWTSRIGAYARKKEYGQCLRVFEEMVDAGCYPDAGTAKVLLAACSDERQVE 578

Query: 553 EAEAVFAEMRR 563
           + +A+   M +
Sbjct: 579 QVKAIVRSMHK 589


>gi|224130786|ref|XP_002328376.1| predicted protein [Populus trichocarpa]
 gi|222838091|gb|EEE76456.1| predicted protein [Populus trichocarpa]
          Length = 599

 Score =  160 bits (404), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 92/282 (32%), Positives = 151/282 (53%)

Query: 367 VGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGC 426
           +G + + +Q+  +  L +QM   G   NV + N LI+   R N++  A+ V  +M  +G 
Sbjct: 99  LGSIAKKKQYSTVVSLCNQMDLFGVTHNVYSLNILINCLCRLNHVVFAISVLGKMFKLGI 158

Query: 427 EPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQ 486
           +PD +T+ TLI+     G +  A+ ++ +M   G  PD  +YS +IN L K+G+   A Q
Sbjct: 159 QPDAITFNTLINGRCIEGEIKEAVGLFNEMVRRGHQPDVISYSTVINGLCKSGNTSMALQ 218

Query: 487 LFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLG 546
           L  +M  +GC PNLV Y  +I    K      A+ L  +M + G  PD VTYS ++    
Sbjct: 219 LLRKMEEKGCKPNLVAYTTIIDSLCKDTLVNDAMDLLSEMVDRGIPPDVVTYSTILHGFC 278

Query: 547 HCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVP 606
             G+L+EA  +F EM  +N +P+   + +LVD   K G V +A   +EAM + G  PN  
Sbjct: 279 SLGHLNEATILFNEMVGRNVMPNTVTFTILVDGLCKEGMVSEARCVFEAMTKKGAEPNAY 338

Query: 607 TCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
           T N+L+  +    Q+ +A  +L  M++ G  P + +Y +L++
Sbjct: 339 TYNALMDGYCLNNQMDEAQKVLDIMVDKGCAPVVHSYNILIN 380



 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 95/300 (31%), Positives = 159/300 (53%), Gaps = 10/300 (3%)

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINK---LLDQMVRDGCQPNVVTYNRLIHSYGRAN 409
           + G + D  T+ T++   GR  + G I +   L ++MVR G QP+V++Y+ +I+   ++ 
Sbjct: 155 KLGIQPDAITFNTLIN--GRCIE-GEIKEAVGLFNEMVRRGHQPDVISYSTVINGLCKSG 211

Query: 410 YLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYS 469
             + AL + ++M+  GC+P+ V Y T+ID   K   ++ AMD+  +M   G+ PD  TYS
Sbjct: 212 NTSMALQLLRKMEEKGCKPNLVAYTTIIDSLCKDTLVNDAMDLLSEMVDRGIPPDVVTYS 271

Query: 470 VIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNA 529
            I++     GHL  A  LF EMV +  +PN VT+ I++    K      A  ++  M   
Sbjct: 272 TILHGFCSLGHLNEATILFNEMVGRNVMPNTVTFTILVDGLCKEGMVSEARCVFEAMTKK 331

Query: 530 GFEPDKVTYSIVMEVLGHC--GYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVR 587
           G EP+  TY+ +M+  G+C    +DEA+ V   M  K   P    Y +L++ + K   + 
Sbjct: 332 GAEPNAYTYNALMD--GYCLNNQMDEAQKVLDIMVDKGCAPVVHSYNILINGYCKRRRLD 389

Query: 588 KAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
           +A      M +  L P+  T ++L+    +VG+  +A +L + M + GL P L TY+ LL
Sbjct: 390 EAKSLLVEMSEKELTPDTVTYSTLMQGLCQVGRPQEALNLFKEMCSSGLLPDLMTYSTLL 449



 Score =  147 bits (372), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 94/340 (27%), Positives = 164/340 (48%), Gaps = 36/340 (10%)

Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLI 402
           A+G FN + R+ G + D  +Y+T++  L ++       +LL +M   GC+PN+V Y  +I
Sbjct: 181 AVGLFNEMVRR-GHQPDVISYSTVINGLCKSGNTSMALQLLRKMEEKGCKPNLVAYTTII 239

Query: 403 HSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLS 462
            S  +   +N+A+D+  +M   G  PD VTY T++      G L+ A  ++ +M    + 
Sbjct: 240 DSLCKDTLVNDAMDLLSEMVDRGIPPDVVTYSTILHGFCSLGHLNEATILFNEMVGRNVM 299

Query: 463 PDTFTYSVIINCLGKAGHLQAAHQLF----------------------CE---------- 490
           P+T T++++++ L K G +  A  +F                      C           
Sbjct: 300 PNTVTFTILVDGLCKEGMVSEARCVFEAMTKKGAEPNAYTYNALMDGYCLNNQMDEAQKV 359

Query: 491 ---MVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGH 547
              MV++GC P + +YNI+I    K R    A  L  +M      PD VTYS +M+ L  
Sbjct: 360 LDIMVDKGCAPVVHSYNILINGYCKRRRLDEAKSLLVEMSEKELTPDTVTYSTLMQGLCQ 419

Query: 548 CGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPT 607
            G   EA  +F EM     +PD   Y  L+D   K G++ +A +  ++M ++ + P++  
Sbjct: 420 VGRPQEALNLFKEMCSSGLLPDLMTYSTLLDGLCKHGHLDEALKLLKSMQESKIEPDIVL 479

Query: 608 CNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
            N L+      G+L  A  L   +   G++P+++TYT+++
Sbjct: 480 YNILIEGMFIAGKLEVAKELFSKLFADGIQPTIRTYTIMI 519



 Score =  136 bits (343), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 86/331 (25%), Positives = 154/331 (46%), Gaps = 35/331 (10%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
            + G K +   YTT++  L +         LL +MV  G  P+VVTY+ ++H +    +L
Sbjct: 224 EEKGCKPNLVAYTTIIDSLCKDTLVNDAMDLLSEMVDRGIPPDVVTYSTILHGFCSLGHL 283

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
           NEA  +F +M      P+ VT+  L+D   K G +  A  +++ M   G  P+ +TY+ +
Sbjct: 284 NEATILFNEMVGRNVMPNTVTFTILVDGLCKEGMVSEARCVFEAMTKKGAEPNAYTYNAL 343

Query: 472 INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNY--------------- 516
           ++       +  A ++   MV++GC P + +YNI+I    K R                 
Sbjct: 344 MDGYCLNNQMDEAQKVLDIMVDKGCAPVVHSYNILINGYCKRRRLDEAKSLLVEMSEKEL 403

Query: 517 --------------------QSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEA 556
                               Q AL L+++M ++G  PD +TYS +++ L   G+LDEA  
Sbjct: 404 TPDTVTYSTLMQGLCQVGRPQEALNLFKEMCSSGLLPDLMTYSTLLDGLCKHGHLDEALK 463

Query: 557 VFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFL 616
           +   M+     PD  +Y +L++    AG +  A E +  +   G++P + T   ++   L
Sbjct: 464 LLKSMQESKIEPDIVLYNILIEGMFIAGKLEVAKELFSKLFADGIQPTIRTYTIMIKGLL 523

Query: 617 RVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
           + G   +AY L + M + G  P+  +Y +++
Sbjct: 524 KEGLSDEAYELFRKMEDDGFLPNSCSYNVII 554



 Score =  136 bits (342), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 87/286 (30%), Positives = 140/286 (48%)

Query: 362 TYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQM 421
           T+T +V  L +         + + M + G +PN  TYN L+  Y   N ++EA  V   M
Sbjct: 304 TFTILVDGLCKEGMVSEARCVFEAMTKKGAEPNAYTYNALMDGYCLNNQMDEAQKVLDIM 363

Query: 422 QVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHL 481
              GC P   +Y  LI+ + K   LD A  +  +M    L+PDT TYS ++  L + G  
Sbjct: 364 VDKGCAPVVHSYNILINGYCKRRRLDEAKSLLVEMSEKELTPDTVTYSTLMQGLCQVGRP 423

Query: 482 QAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIV 541
           Q A  LF EM + G +P+L+TY+ ++    K  +   ALKL + MQ +  EPD V Y+I+
Sbjct: 424 QEALNLFKEMCSSGLLPDLMTYSTLLDGLCKHGHLDEALKLLKSMQESKIEPDIVLYNIL 483

Query: 542 MEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGL 601
           +E +   G L+ A+ +F+++      P    Y +++    K G   +A+E +  M   G 
Sbjct: 484 IEGMFIAGKLEVAKELFSKLFADGIQPTIRTYTIMIKGLLKEGLSDEAYELFRKMEDDGF 543

Query: 602 RPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
            PN  + N ++  FL+    S A  L+  M+         T+ +LL
Sbjct: 544 LPNSCSYNVIIQGFLQNQDSSTAIRLIDEMVGKRFSADSSTFQMLL 589



 Score =  118 bits (296), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 70/227 (30%), Positives = 117/227 (51%), Gaps = 10/227 (4%)

Query: 361 HTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQ 420
           H+Y  ++    + R+      LL +M      P+ VTY+ L+    +     EAL++FK+
Sbjct: 373 HSYNILINGYCKRRRLDEAKSLLVEMSEKELTPDTVTYSTLMQGLCQVGRPQEALNLFKE 432

Query: 421 MQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGH 480
           M   G  PD +TY TL+D   K G LD A+ + K MQ + + PD   Y+++I  +  AG 
Sbjct: 433 MCSSGLLPDLMTYSTLLDGLCKHGHLDEALKLLKSMQESKIEPDIVLYNILIEGMFIAGK 492

Query: 481 LQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSI 540
           L+ A +LF ++   G  P + TY IMI    K      A +L+R M++ GF P+  +Y++
Sbjct: 493 LEVAKELFSKLFADGIQPTIRTYTIMIKGLLKEGLSDEAYELFRKMEDDGFLPNSCSYNV 552

Query: 541 VMEVLGHCGYL---DEAEAV--FAEMRRKNWVPDEPVYGLLVDLWGK 582
           +++     G+L   D + A+    EM  K +  D   + +L+DL  +
Sbjct: 553 IIQ-----GFLQNQDSSTAIRLIDEMVGKRFSADSSTFQMLLDLESR 594



 Score = 94.0 bits (232), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 78/342 (22%), Positives = 151/342 (44%), Gaps = 12/342 (3%)

Query: 411 LNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSV 470
           +++AL  F +M  +   P  V +   +   AK       + +  +M   G++ + ++ ++
Sbjct: 73  IDDALASFYRMLRMNPRPSVVEFGRFLGSIAKKKQYSTVVSLCNQMDLFGVTHNVYSLNI 132

Query: 471 IINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAG 530
           +INCL +  H+  A  +  +M   G  P+ +T+N +I  +      + A+ L+ +M   G
Sbjct: 133 LINCLCRLNHVVFAISVLGKMFKLGIQPDAITFNTLINGRCIEGEIKEAVGLFNEMVRRG 192

Query: 531 FEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAW 590
            +PD ++YS V+  L   G    A  +  +M  K   P+   Y  ++D   K   V  A 
Sbjct: 193 HQPDVISYSTVINGLCKSGNTSMALQLLRKMEEKGCKPNLVAYTTIIDSLCKDTLVNDAM 252

Query: 591 EWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS-- 648
           +    M+  G+ P+V T +++L  F  +G L++A  L   M+   + P+  T+T+L+   
Sbjct: 253 DLLSEMVDRGIPPDVVTYSTILHGFCSLGHLNEATILFNEMVGRNVMPNTVTFTILVDGL 312

Query: 649 C----CTEARSPYDMGFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSE 704
           C     +EAR  +      E M   G   + +  +    G    N  D     L++M  +
Sbjct: 313 CKEGMVSEARCVF------EAMTKKGAEPNAYTYNALMDGYCLNNQMDEAQKVLDIMVDK 366

Query: 705 DRESKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAV 746
                    + +++   K    +EA S+    ++K + PD V
Sbjct: 367 GCAPVVHSYNILINGYCKRRRLDEAKSLLVEMSEKELTPDTV 408



 Score = 66.2 bits (160), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 44/159 (27%), Positives = 78/159 (49%)

Query: 354 AGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNE 413
           +G   D  TY+T++  L +        KLL  M     +P++V YN LI     A  L  
Sbjct: 436 SGLLPDLMTYSTLLDGLCKHGHLDEALKLLKSMQESKIEPDIVLYNILIEGMFIAGKLEV 495

Query: 414 ALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIIN 473
           A ++F ++   G +P   TY  +I    K G  D A ++++KM+  G  P++ +Y+VII 
Sbjct: 496 AKELFSKLFADGIQPTIRTYTIMIKGLLKEGLSDEAYELFRKMEDDGFLPNSCSYNVIIQ 555

Query: 474 CLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAK 512
              +      A +L  EMV +    +  T+ +++ L+++
Sbjct: 556 GFLQNQDSSTAIRLIDEMVGKRFSADSSTFQMLLDLESR 594


>gi|302756535|ref|XP_002961691.1| hypothetical protein SELMODRAFT_403786 [Selaginella moellendorffii]
 gi|300170350|gb|EFJ36951.1| hypothetical protein SELMODRAFT_403786 [Selaginella moellendorffii]
          Length = 545

 Score =  160 bits (404), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 93/314 (29%), Positives = 168/314 (53%), Gaps = 4/314 (1%)

Query: 362 TYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQM 421
           +YT M+  L ++R+      L  QMV     P+VVTY  LI   G+   + EA D+F++ 
Sbjct: 207 SYTIMIDGLCKSRKVDKAITLFKQMVDKAIYPDVVTYGALIDGLGKQRRVKEAYDLFEEA 266

Query: 422 QVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKM-QAAGLSPDTFTYSVIINCLGKAGH 480
           +  GC P  VTY T+ID   K G ++ A+ +Y  M +   L PD FTYS +IN L  +  
Sbjct: 267 RAKGCHPTVVTYNTMIDGLCKCGRIENALTLYDDMVREPHLKPDMFTYSALINGLNLSNR 326

Query: 481 LQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF-EPDKVTYS 539
            + A++L+ EM++ GC P++VTYN ++    K+     A++++R M      +P+ +TY+
Sbjct: 327 GEKAYELYEEMLDTGCSPDVVTYNTLLDGLCKSGCEDKAMEIFRKMGVGNVCDPNVITYT 386

Query: 540 IVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQA 599
           ++++       L +A  +  EM  ++ +PD   +  ++    K   + +A E +E++ + 
Sbjct: 387 VLIDRFCKVDRLGDAVKLAKEMEGRSLLPDAVTFTTVIQKLCKESRIDEAHELFESIGKT 446

Query: 600 GLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS-CCTEARSPYD 658
             +P+    N++L+ + ++ ++ DA  L   ML+ G  P+L TYT L++  C   R    
Sbjct: 447 -CKPDSVLFNTMLAGYCKITRIDDAKKLHDRMLDSGCAPTLATYTALVTGFCRTGRYSDA 505

Query: 659 MGFCHELMAVSGHP 672
           +   HE++ +   P
Sbjct: 506 LIMYHEMIEMGFPP 519



 Score =  141 bits (355), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 106/391 (27%), Positives = 178/391 (45%), Gaps = 40/391 (10%)

Query: 304 ILRQW----KWGPLAEEALGNTNYSMDAYQANQVLKQLQDHTVALGFFNWLRRQAGFKHD 359
           ILRQ     + G   E++LG     +      +V+ ++ D   A   F W  +Q+ F H+
Sbjct: 42  ILRQVVDSKRAGEGIEKSLGLYGDILVPDLVGKVIHRIPDPNTAWEVFQWAGKQSKFTHN 101

Query: 360 EHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFK 419
             T   ++ +  +AR+    +      +++  +P+ V+YN L++ + +A  + +AL +F 
Sbjct: 102 RFTCNNLLSVYVKARRVEDAHLFFQSHMKNVFEPDEVSYNTLMNGFFKAGDVKKALALFG 161

Query: 420 QMQVVGC---------------------------------EPDRVTYCTLIDIHAKAGFL 446
           +M+  G                                   P+ ++Y  +ID   K+  +
Sbjct: 162 EMKDSGIAVLRSHNIVLRGLCSGGKISMAWEVFKDMSGIFSPNLISYTIMIDGLCKSRKV 221

Query: 447 DVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIM 506
           D A+ ++K+M    + PD  TY  +I+ LGK   ++ A+ LF E   +GC P +VTYN M
Sbjct: 222 DKAITLFKQMVDKAIYPDVVTYGALIDGLGKQRRVKEAYDLFEEARAKGCHPTVVTYNTM 281

Query: 507 IALQAKARNYQSALKLYRDM-QNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKN 565
           I    K    ++AL LY DM +    +PD  TYS ++  L      ++A  ++ EM    
Sbjct: 282 IDGLCKCGRIENALTLYDDMVREPHLKPDMFTYSALINGLNLSNRGEKAYELYEEMLDTG 341

Query: 566 WVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGL-RPNVPTCNSLLSAFLRVGQLSDA 624
             PD   Y  L+D   K+G   KA E +  M    +  PNV T   L+  F +V +L DA
Sbjct: 342 CSPDVVTYNTLLDGLCKSGCEDKAMEIFRKMGVGNVCDPNVITYTVLIDRFCKVDRLGDA 401

Query: 625 YHLLQGMLNLGLKPSLQTYTLLL-SCCTEAR 654
             L + M    L P   T+T ++   C E+R
Sbjct: 402 VKLAKEMEGRSLLPDAVTFTTVIQKLCKESR 432



 Score =  116 bits (291), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 67/228 (29%), Positives = 119/228 (52%), Gaps = 2/228 (0%)

Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLI 402
           AL  ++ + R+   K D  TY+ ++  L  + +     +L ++M+  GC P+VVTYN L+
Sbjct: 294 ALTLYDDMVREPHLKPDMFTYSALINGLNLSNRGEKAYELYEEMLDTGCSPDVVTYNTLL 353

Query: 403 HSYGRANYLNEALDVFKQMQVVG-CEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGL 461
               ++   ++A+++F++M V   C+P+ +TY  LID   K   L  A+ + K+M+   L
Sbjct: 354 DGLCKSGCEDKAMEIFRKMGVGNVCDPNVITYTVLIDRFCKVDRLGDAVKLAKEMEGRSL 413

Query: 462 SPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALK 521
            PD  T++ +I  L K   +  AH+LF E + + C P+ V +N M+A   K      A K
Sbjct: 414 LPDAVTFTTVIQKLCKESRIDEAHELF-ESIGKTCKPDSVLFNTMLAGYCKITRIDDAKK 472

Query: 522 LYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPD 569
           L+  M ++G  P   TY+ ++      G   +A  ++ EM    + P+
Sbjct: 473 LHDRMLDSGCAPTLATYTALVTGFCRTGRYSDALIMYHEMIEMGFPPE 520


>gi|186510147|ref|NP_188293.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75274280|sp|Q9LUR2.1|PP238_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At3g16710, mitochondrial; Flags: Precursor
 gi|11994626|dbj|BAB02763.1| unnamed protein product [Arabidopsis thaliana]
 gi|332642334|gb|AEE75855.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 507

 Score =  160 bits (404), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 94/296 (31%), Positives = 153/296 (51%), Gaps = 4/296 (1%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           GFK +  TYTT++  L + R      +L +QM  +G +PNVVTYN L+          +A
Sbjct: 183 GFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDA 242

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
             + + M     EP+ +T+  LID   K G L  A ++Y  M    + PD FTY  +IN 
Sbjct: 243 AWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLING 302

Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPD 534
           L   G L  A Q+F  M   GC PN V Y  +I    K++  +  +K++ +M   G   +
Sbjct: 303 LCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVAN 362

Query: 535 KVTYSIVMEVLGHC--GYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEW 592
            +TY+++++  G+C  G  D A+ VF +M  +   PD   Y +L+D     G V KA   
Sbjct: 363 TITYTVLIQ--GYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMI 420

Query: 593 YEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
           +E M +  +  N+ T   ++    ++G++ DA+ L   + + G+KP++ TYT ++S
Sbjct: 421 FEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMIS 476



 Score =  125 bits (313), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 75/282 (26%), Positives = 141/282 (50%)

Query: 362 TYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQM 421
           TY  +V  L    ++G    LL  M++   +PNV+T+  LI ++ +   L EA +++  M
Sbjct: 225 TYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVM 284

Query: 422 QVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHL 481
             +   PD  TY +LI+     G LD A  M+  M+  G  P+   Y+ +I+   K+  +
Sbjct: 285 IQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRV 344

Query: 482 QAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIV 541
           +   ++F EM  +G + N +TY ++I           A +++  M +    PD  TY+++
Sbjct: 345 EDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVL 404

Query: 542 MEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGL 601
           ++ L   G +++A  +F  MR++    +   Y +++    K G V  A++ + ++   G+
Sbjct: 405 LDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGM 464

Query: 602 RPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTY 643
           +PNV T  +++S F R G + +A  L + M   G  P+   Y
Sbjct: 465 KPNVITYTTMISGFCRRGLIHEADSLFKKMKEDGFLPNESVY 506



 Score =  122 bits (305), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 78/271 (28%), Positives = 133/271 (49%), Gaps = 2/271 (0%)

Query: 382 LLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHA 441
            L +M++ G +P++VT+  L++ Y   N + +A+ +F Q+  +G +P+ VTY TLI    
Sbjct: 140 FLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLC 199

Query: 442 KAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLV 501
           K   L+ A++++ +M   G  P+  TY+ ++  L + G    A  L  +M+ +   PN++
Sbjct: 200 KNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVI 259

Query: 502 TYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEM 561
           T+  +I    K      A +LY  M      PD  TY  ++  L   G LDEA  +F  M
Sbjct: 260 TFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLM 319

Query: 562 RRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQL 621
            R    P+E +Y  L+  + K+  V    + +  M Q G+  N  T   L+  +  VG+ 
Sbjct: 320 ERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRP 379

Query: 622 SDAYHLLQGMLNLGLKPSLQTYTLLLS--CC 650
             A  +   M +    P ++TY +LL   CC
Sbjct: 380 DVAQEVFNQMSSRRAPPDIRTYNVLLDGLCC 410



 Score =  114 bits (285), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 75/308 (24%), Positives = 139/308 (45%), Gaps = 35/308 (11%)

Query: 375 QFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGC-------- 426
           QF     L  +MV     P+++ + RL+    + N  +  + +F+QMQ++G         
Sbjct: 63  QFNDALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQMQILGIPPLLCTCN 122

Query: 427 ---------------------------EPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAA 459
                                      EPD VT+ +L++ +     ++ A+ ++ ++   
Sbjct: 123 IVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGM 182

Query: 460 GLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSA 519
           G  P+  TY+ +I CL K  HL  A +LF +M   G  PN+VTYN ++    +   +  A
Sbjct: 183 GFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDA 242

Query: 520 LKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDL 579
             L RDM     EP+ +T++ +++     G L EA+ ++  M + +  PD   YG L++ 
Sbjct: 243 AWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLING 302

Query: 580 WGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPS 639
               G + +A + +  M + G  PN     +L+  F +  ++ D   +   M   G+  +
Sbjct: 303 LCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVAN 362

Query: 640 LQTYTLLL 647
             TYT+L+
Sbjct: 363 TITYTVLI 370



 Score = 98.6 bits (244), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 78/316 (24%), Positives = 147/316 (46%), Gaps = 20/316 (6%)

Query: 411 LNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSV 470
            N+ALD+F +M      P  + +  L+ + AK    DV + ++++MQ  G+ P   T ++
Sbjct: 64  FNDALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQMQILGIPPLLCTCNI 123

Query: 471 IINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAG 530
           +++C+  +     A     +M+  G  P+LVT+  ++         + A+ L+  +   G
Sbjct: 124 VMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMG 183

Query: 531 FEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAW 590
           F+P+ VTY+ ++  L    +L+ A  +F +M      P+   Y  LV    + G    A 
Sbjct: 184 FKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAA 243

Query: 591 EWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTY-TLLLSC 649
                M++  + PNV T  +L+ AF++VG+L +A  L   M+ + + P + TY +L+   
Sbjct: 244 WLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGL 303

Query: 650 CT-----EARSPYDMGFCHELMAVSG-HPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHS 703
           C      EAR  +       LM  +G +P  +   ++       + V D +  F EM   
Sbjct: 304 CMYGLLDEARQMF------YLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEM--- 354

Query: 704 EDRESKRGLVDAVVDF 719
               S++G+V   + +
Sbjct: 355 ----SQKGVVANTITY 366



 Score = 89.0 bits (219), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 66/250 (26%), Positives = 113/250 (45%), Gaps = 7/250 (2%)

Query: 296 NVVESVSRILRQWKWGPLAE-EALGNTNYSMDAYQANQVLKQLQDHTVALGFFN------ 348
           NV+   + I    K G L E + L N    M  Y        L +     G  +      
Sbjct: 257 NVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMF 316

Query: 349 WLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRA 408
           +L  + G   +E  YTT++    ++++     K+  +M + G   N +TY  LI  Y   
Sbjct: 317 YLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLV 376

Query: 409 NYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTY 468
              + A +VF QM      PD  TY  L+D     G ++ A+ +++ M+   +  +  TY
Sbjct: 377 GRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTY 436

Query: 469 SVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQN 528
           ++II  + K G ++ A  LFC + ++G  PN++TY  MI+   +      A  L++ M+ 
Sbjct: 437 TIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFKKMKE 496

Query: 529 AGFEPDKVTY 538
            GF P++  Y
Sbjct: 497 DGFLPNESVY 506


>gi|302784458|ref|XP_002974001.1| hypothetical protein SELMODRAFT_100394 [Selaginella moellendorffii]
 gi|300158333|gb|EFJ24956.1| hypothetical protein SELMODRAFT_100394 [Selaginella moellendorffii]
          Length = 561

 Score =  160 bits (404), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 104/311 (33%), Positives = 157/311 (50%), Gaps = 13/311 (4%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           GF+ D   Y T++  L ++R+     +L+  M+R GC P VVTYN L+  + R+  ++ A
Sbjct: 201 GFQPDVIMYNTLLNGLCKSRRLDEALELVQLMIRSGCYPTVVTYNSLMELFCRSKQVDRA 260

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
             + + M   GC PD + Y T+I    +   LD A  + K+M AA   PD  TYS II+ 
Sbjct: 261 FRLIQVMSERGCPPDVINYNTVIAGLCRDARLDDAQALLKQMVAARCVPDVITYSTIIDG 320

Query: 475 LGKAGH------LQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQN 528
           L K         L+AA ++   M   GC PN  TY ++I    +AR  Q AL L R M +
Sbjct: 321 LCKDWRVDADWKLEAACEILEMMKQTGCPPNAGTYAVVIEGLCRARKSQQALALLRRMID 380

Query: 529 AGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRK 588
           +   PD  ++S+V+  L     LD A  +F  M  +   P+   Y  L+D   K G V K
Sbjct: 381 SEVVPDLSSFSMVIGSLCKSHDLDAAYKIFGMMSERECKPNPVAYAALIDGLSKGGEVDK 440

Query: 589 AWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL- 647
           A   +E M+++  RP V T NS+L     VG++ +A  +++GM++    P   +Y  L+ 
Sbjct: 441 AVRVFELMVES-FRPGVATYNSVLDGLCGVGRIEEAVRMVEGMIHKECFPDGASYGALIR 499

Query: 648 -----SCCTEA 653
                SC  EA
Sbjct: 500 GLCRVSCVEEA 510



 Score =  144 bits (362), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 93/321 (28%), Positives = 157/321 (48%), Gaps = 7/321 (2%)

Query: 359 DEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVF 418
           +E TY +++  L +A +     +LLD+M   G  P V  +N +I    +A    +AL  F
Sbjct: 29  NEFTYGSLIHGLCKAGKLDQAYELLDEMRDRGIPPGVAVHNGVIKGLCKAGRFGDALGYF 88

Query: 419 KQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLS-PDTFTYSVIINCLGK 477
           K +    C PD +T+  L+D   K+G ++ A  +++ M  +    P+  TY+ +IN L K
Sbjct: 89  KTVAGTKCTPDIITFNILVDALVKSGRVEEAFQIFESMHTSSQCLPNVVTYTTVINGLCK 148

Query: 478 AGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVT 537
            G L  A +L   M   GC PN++TY++++    KA        L ++M   GF+PD + 
Sbjct: 149 DGKLDRAIELLDLMNETGCCPNVITYSVLVEGLCKAGRTDKGFTLLQEMTRRGFQPDVIM 208

Query: 538 YSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAML 597
           Y+ ++  L     LDEA  +   M R    P    Y  L++L+ ++  V +A+   + M 
Sbjct: 209 YNTLLNGLCKSRRLDEALELVQLMIRSGCYPTVVTYNSLMELFCRSKQVDRAFRLIQVMS 268

Query: 598 QAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTY-TLLLSCCTEARSP 656
           + G  P+V   N++++   R  +L DA  LL+ M+     P + TY T++   C + R  
Sbjct: 269 ERGCPPDVINYNTVIAGLCRDARLDDAQALLKQMVAARCVPDVITYSTIIDGLCKDWRVD 328

Query: 657 YDMGF---CH--ELMAVSGHP 672
            D      C   E+M  +G P
Sbjct: 329 ADWKLEAACEILEMMKQTGCP 349



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 88/288 (30%), Positives = 148/288 (51%), Gaps = 5/288 (1%)

Query: 369 ILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEP 428
           +L RA Q G   +L  +   + C PN  TY  LIH   +A  L++A ++  +M+  G  P
Sbjct: 7   LLVRAGQHGQAVQLFRE---ERCVPNEFTYGSLIHGLCKAGKLDQAYELLDEMRDRGIPP 63

Query: 429 DRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLF 488
               +  +I    KAG    A+  +K +     +PD  T++++++ L K+G ++ A Q+F
Sbjct: 64  GVAVHNGVIKGLCKAGRFGDALGYFKTVAGTKCTPDIITFNILVDALVKSGRVEEAFQIF 123

Query: 489 CEM-VNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGH 547
             M  +  C+PN+VTY  +I    K      A++L   M   G  P+ +TYS+++E L  
Sbjct: 124 ESMHTSSQCLPNVVTYTTVINGLCKDGKLDRAIELLDLMNETGCCPNVITYSVLVEGLCK 183

Query: 548 CGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPT 607
            G  D+   +  EM R+ + PD  +Y  L++   K+  + +A E  + M+++G  P V T
Sbjct: 184 AGRTDKGFTLLQEMTRRGFQPDVIMYNTLLNGLCKSRRLDEALELVQLMIRSGCYPTVVT 243

Query: 608 CNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTY-TLLLSCCTEAR 654
            NSL+  F R  Q+  A+ L+Q M   G  P +  Y T++   C +AR
Sbjct: 244 YNSLMELFCRSKQVDRAFRLIQVMSERGCPPDVINYNTVIAGLCRDAR 291



 Score =  140 bits (352), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 114/416 (27%), Positives = 186/416 (44%), Gaps = 21/416 (5%)

Query: 343 ALGFFNWLRRQAGFKH--DEHTYTTMVGILGRARQFGAINKLLDQM-VRDGCQPNVVTYN 399
           ALG+F  +   AG K   D  T+  +V  L ++ +     ++ + M     C PNVVTY 
Sbjct: 84  ALGYFKTV---AGTKCTPDIITFNILVDALVKSGRVEEAFQIFESMHTSSQCLPNVVTYT 140

Query: 400 RLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAA 459
            +I+   +   L+ A+++   M   GC P+ +TY  L++   KAG  D    + ++M   
Sbjct: 141 TVINGLCKDGKLDRAIELLDLMNETGCCPNVITYSVLVEGLCKAGRTDKGFTLLQEMTRR 200

Query: 460 GLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSA 519
           G  PD   Y+ ++N L K+  L  A +L   M+  GC P +VTYN ++ L  +++    A
Sbjct: 201 GFQPDVIMYNTLLNGLCKSRRLDEALELVQLMIRSGCYPTVVTYNSLMELFCRSKQVDRA 260

Query: 520 LKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDL 579
            +L + M   G  PD + Y+ V+  L     LD+A+A+  +M     VPD   Y  ++D 
Sbjct: 261 FRLIQVMSERGCPPDVINYNTVIAGLCRDARLDDAQALLKQMVAARCVPDVITYSTIIDG 320

Query: 580 WGKAGNVRKAW------EWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLN 633
             K   V   W      E  E M Q G  PN  T   ++    R  +   A  LL+ M++
Sbjct: 321 LCKDWRVDADWKLEAACEILEMMKQTGCPPNAGTYAVVIEGLCRARKSQQALALLRRMID 380

Query: 634 LGLKPSLQTYTLLL-SCCT--EARSPYDM-GFCHELMAVSGHPAHMFLLSMPSPGPDGQN 689
             + P L ++++++ S C   +  + Y + G   E        A+  L+   S G +   
Sbjct: 381 SEVVPDLSSFSMVIGSLCKSHDLDAAYKIFGMMSERECKPNPVAYAALIDGLSKGGE--- 437

Query: 690 VRDHVGSFLEMMHSEDRESKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDA 745
             D      E+M    R       ++V+D L   G  EEA  + E    K  +PD 
Sbjct: 438 -VDKAVRVFELMVESFRPGV-ATYNSVLDGLCGVGRIEEAVRMVEGMIHKECFPDG 491



 Score =  114 bits (284), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 80/291 (27%), Positives = 142/291 (48%), Gaps = 7/291 (2%)

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGR----- 407
           + G   D   Y T++  L R  +      LL QMV   C P+V+TY+ +I    +     
Sbjct: 269 ERGCPPDVINYNTVIAGLCRDARLDDAQALLKQMVAARCVPDVITYSTIIDGLCKDWRVD 328

Query: 408 ANY-LNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTF 466
           A++ L  A ++ + M+  GC P+  TY  +I+   +A     A+ + ++M  + + PD  
Sbjct: 329 ADWKLEAACEILEMMKQTGCPPNAGTYAVVIEGLCRARKSQQALALLRRMIDSEVVPDLS 388

Query: 467 TYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDM 526
           ++S++I  L K+  L AA+++F  M  + C PN V Y  +I   +K      A++++  M
Sbjct: 389 SFSMVIGSLCKSHDLDAAYKIFGMMSERECKPNPVAYAALIDGLSKGGEVDKAVRVFELM 448

Query: 527 QNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNV 586
             + F P   TY+ V++ L   G ++EA  +   M  K   PD   YG L+    +   V
Sbjct: 449 VES-FRPGVATYNSVLDGLCGVGRIEEAVRMVEGMIHKECFPDGASYGALIRGLCRVSCV 507

Query: 587 RKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLK 637
            +A+E ++A+   G    V   N L++   +  +LSDA+ +   ++  G K
Sbjct: 508 EEAYELFQAVEAKGFAMEVGVYNVLVNELCKKKRLSDAHGVANKLIEAGYK 558



 Score = 93.6 bits (231), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 59/219 (26%), Positives = 112/219 (51%), Gaps = 4/219 (1%)

Query: 437 IDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGC 496
           +++  +AG    A+ ++++ +     P+ FTY  +I+ L KAG L  A++L  EM ++G 
Sbjct: 5   LNLLVRAGQHGQAVQLFREERCV---PNEFTYGSLIHGLCKAGKLDQAYELLDEMRDRGI 61

Query: 497 IPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEA 556
            P +  +N +I    KA  +  AL  ++ +      PD +T++I+++ L   G ++EA  
Sbjct: 62  PPGVAVHNGVIKGLCKAGRFGDALGYFKTVAGTKCTPDIITFNILVDALVKSGRVEEAFQ 121

Query: 557 VFAEMRRKN-WVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAF 615
           +F  M   +  +P+   Y  +++   K G + +A E  + M + G  PNV T + L+   
Sbjct: 122 IFESMHTSSQCLPNVVTYTTVINGLCKDGKLDRAIELLDLMNETGCCPNVITYSVLVEGL 181

Query: 616 LRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEAR 654
            + G+    + LLQ M   G +P +  Y  LL+   ++R
Sbjct: 182 CKAGRTDKGFTLLQEMTRRGFQPDVIMYNTLLNGLCKSR 220


>gi|357438771|ref|XP_003589662.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355478710|gb|AES59913.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 988

 Score =  160 bits (404), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 94/292 (32%), Positives = 152/292 (52%), Gaps = 1/292 (0%)

Query: 362 TYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQM 421
           TY T++  L R  +     + LD MV +   P++V+YN LI+ Y R     EAL +F ++
Sbjct: 314 TYNTIMYSLCRLGRVSDARRYLDVMVNEDLMPDLVSYNTLIYGYSRLGNFAEALLLFSEL 373

Query: 422 QVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHL 481
           +     P  VTY TLID   + G LD+A  M   M   GL PD  T+++++    + G+L
Sbjct: 374 RSKNLVPSVVTYNTLIDGGCRTGNLDIAKGMKDDMIKHGLCPDVVTFTILVRGFCQMGNL 433

Query: 482 QAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIV 541
             A +LF EM+++G  P+ + Y   I  + K  N   A  +  +M+  GF PD +TY+++
Sbjct: 434 PMAKELFDEMLSRGLKPDCIAYTTRIVGELKLGNPSKAFGMKEEMKAEGFPPDLITYNVL 493

Query: 542 MEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGL 601
           +  L   G  D+A  +  +MR +  VPD   Y  ++     +G +RKA E +  ML+ G+
Sbjct: 494 INGLCKLGNFDDANELVQKMRLEGIVPDHVTYTSIIHAHLISGLLRKAEEVFSDMLKKGI 553

Query: 602 RPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTY-TLLLSCCTE 652
            P+V T   L+ ++   G+L  A      M + G+ P++ TY  L+   C E
Sbjct: 554 HPSVVTYTVLIHSYAVRGRLDFAKKYFDEMQDKGVSPNVITYNALIYGLCKE 605



 Score =  132 bits (332), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 88/290 (30%), Positives = 144/290 (49%)

Query: 359 DEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVF 418
           D  +Y T++    R   F     L  ++      P+VVTYN LI    R   L+ A  + 
Sbjct: 346 DLVSYNTLIYGYSRLGNFAEALLLFSELRSKNLVPSVVTYNTLIDGGCRTGNLDIAKGMK 405

Query: 419 KQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKA 478
             M   G  PD VT+  L+    + G L +A +++ +M + GL PD   Y+  I    K 
Sbjct: 406 DDMIKHGLCPDVVTFTILVRGFCQMGNLPMAKELFDEMLSRGLKPDCIAYTTRIVGELKL 465

Query: 479 GHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTY 538
           G+   A  +  EM  +G  P+L+TYN++I    K  N+  A +L + M+  G  PD VTY
Sbjct: 466 GNPSKAFGMKEEMKAEGFPPDLITYNVLINGLCKLGNFDDANELVQKMRLEGIVPDHVTY 525

Query: 539 SIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQ 598
           + ++      G L +AE VF++M +K   P    Y +L+  +   G +  A ++++ M  
Sbjct: 526 TSIIHAHLISGLLRKAEEVFSDMLKKGIHPSVVTYTVLIHSYAVRGRLDFAKKYFDEMQD 585

Query: 599 AGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
            G+ PNV T N+L+    +   +  AY+L   M + G+ P+  TYT+L++
Sbjct: 586 KGVSPNVITYNALIYGLCKENMMDVAYNLFAEMESKGVSPNKYTYTILIN 635



 Score =  130 bits (326), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 88/325 (27%), Positives = 161/325 (49%), Gaps = 2/325 (0%)

Query: 326 DAYQANQVLKQLQDHTVA--LGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLL 383
           D    N+VLK L+D ++   +     +  +   +    T+ TM+    +  + G   ++L
Sbjct: 171 DVRNCNRVLKLLKDKSMVNEVEEVYSVMIKCQIRPTIVTFNTMMDSRCKEGEVGRAVEVL 230

Query: 384 DQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKA 443
           D M   GC PN V+YN L++        + A ++ +QM ++G +    TY  LI    K 
Sbjct: 231 DVMRMFGCDPNDVSYNVLVNGLSGKGEFDRAKELIEQMSMLGLKVSAHTYNPLIRGFCKK 290

Query: 444 GFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTY 503
              + A D+ ++M   G  P   TY+ I+  L + G +  A +    MVN+  +P+LV+Y
Sbjct: 291 EMFEEANDLRREMLGRGALPTVVTYNTIMYSLCRLGRVSDARRYLDVMVNEDLMPDLVSY 350

Query: 504 NIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRR 563
           N +I   ++  N+  AL L+ ++++    P  VTY+ +++     G LD A+ +  +M +
Sbjct: 351 NTLIYGYSRLGNFAEALLLFSELRSKNLVPSVVTYNTLIDGGCRTGNLDIAKGMKDDMIK 410

Query: 564 KNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSD 623
               PD   + +LV  + + GN+  A E ++ ML  GL+P+     + +   L++G  S 
Sbjct: 411 HGLCPDVVTFTILVRGFCQMGNLPMAKELFDEMLSRGLKPDCIAYTTRIVGELKLGNPSK 470

Query: 624 AYHLLQGMLNLGLKPSLQTYTLLLS 648
           A+ + + M   G  P L TY +L++
Sbjct: 471 AFGMKEEMKAEGFPPDLITYNVLIN 495



 Score =  124 bits (312), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 70/194 (36%), Positives = 106/194 (54%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           +  GF  D  TY  ++  L +   F   N+L+ +M  +G  P+ VTY  +IH++  +  L
Sbjct: 479 KAEGFPPDLITYNVLINGLCKLGNFDDANELVQKMRLEGIVPDHVTYTSIIHAHLISGLL 538

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
            +A +VF  M   G  P  VTY  LI  +A  G LD A   + +MQ  G+SP+  TY+ +
Sbjct: 539 RKAEEVFSDMLKKGIHPSVVTYTVLIHSYAVRGRLDFAKKYFDEMQDKGVSPNVITYNAL 598

Query: 472 INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF 531
           I  L K   +  A+ LF EM ++G  PN  TY I+I   +  + +Q ALKLY+DM +   
Sbjct: 599 IYGLCKENMMDVAYNLFAEMESKGVSPNKYTYTILINENSNLQYWQDALKLYKDMLDREI 658

Query: 532 EPDKVTYSIVMEVL 545
           +PD  T+S +M+ L
Sbjct: 659 KPDSCTHSALMKHL 672



 Score =  124 bits (311), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 84/287 (29%), Positives = 138/287 (48%)

Query: 362 TYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQM 421
           TY T++    R         + D M++ G  P+VVT+  L+  + +   L  A ++F +M
Sbjct: 384 TYNTLIDGGCRTGNLDIAKGMKDDMIKHGLCPDVVTFTILVRGFCQMGNLPMAKELFDEM 443

Query: 422 QVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHL 481
              G +PD + Y T I    K G    A  M ++M+A G  PD  TY+V+IN L K G+ 
Sbjct: 444 LSRGLKPDCIAYTTRIVGELKLGNPSKAFGMKEEMKAEGFPPDLITYNVLINGLCKLGNF 503

Query: 482 QAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIV 541
             A++L  +M  +G +P+ VTY  +I     +   + A +++ DM   G  P  VTY+++
Sbjct: 504 DDANELVQKMRLEGIVPDHVTYTSIIHAHLISGLLRKAEEVFSDMLKKGIHPSVVTYTVL 563

Query: 542 MEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGL 601
           +      G LD A+  F EM+ K   P+   Y  L+    K   +  A+  +  M   G+
Sbjct: 564 IHSYAVRGRLDFAKKYFDEMQDKGVSPNVITYNALIYGLCKENMMDVAYNLFAEMESKGV 623

Query: 602 RPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
            PN  T   L++    +    DA  L + ML+  +KP   T++ L+ 
Sbjct: 624 SPNKYTYTILINENSNLQYWQDALKLYKDMLDREIKPDSCTHSALMK 670



 Score =  120 bits (300), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 114/491 (23%), Positives = 185/491 (37%), Gaps = 87/491 (17%)

Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGR------------------------------ 372
           AL FF W+ +Q  F   E  +  ++ IL +                              
Sbjct: 68  ALRFFRWVEKQPNFHRSETAFVAILDILAKNGFMKPAYWVMEKAIEVKVDGGVLDVLVGI 127

Query: 373 --ARQFGAINKLLD--------------------QMVRDGCQPNVVTYNRLIHSYGRANY 410
              R      KLLD                    +MV +G  P+V   NR++      + 
Sbjct: 128 GCGRNSEVSVKLLDLLIQVFAKKLILEKCLMVFYKMVNNGLLPDVRNCNRVLKLLKDKSM 187

Query: 411 LNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSV 470
           +NE  +V+  M      P  VT+ T++D   K G +  A+++   M+  G  P+  +Y+V
Sbjct: 188 VNEVEEVYSVMIKCQIRPTIVTFNTMMDSRCKEGEVGRAVEVLDVMRMFGCDPNDVSYNV 247

Query: 471 IINCLGKAGHLQAAHQL----------------------FC-------------EMVNQG 495
           ++N L   G    A +L                      FC             EM+ +G
Sbjct: 248 LVNGLSGKGEFDRAKELIEQMSMLGLKVSAHTYNPLIRGFCKKEMFEEANDLRREMLGRG 307

Query: 496 CIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAE 555
            +P +VTYN ++    +      A +    M N    PD V+Y+ ++      G   EA 
Sbjct: 308 ALPTVVTYNTIMYSLCRLGRVSDARRYLDVMVNEDLMPDLVSYNTLIYGYSRLGNFAEAL 367

Query: 556 AVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAF 615
            +F+E+R KN VP    Y  L+D   + GN+  A    + M++ GL P+V T   L+  F
Sbjct: 368 LLFSELRSKNLVPSVVTYNTLIDGGCRTGNLDIAKGMKDDMIKHGLCPDVVTFTILVRGF 427

Query: 616 LRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGFCHELMAVSGHPAHM 675
            ++G L  A  L   ML+ GLKP    YT  +    +  +P       E M   G P  +
Sbjct: 428 CQMGNLPMAKELFDEMLSRGLKPDCIAYTTRIVGELKLGNPSKAFGMKEEMKAEGFPPDL 487

Query: 676 FLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRESKRGLVDAVVDFLHKSGLKEEAGSVWEV 735
              ++   G       D     ++ M  E          +++     SGL  +A  V+  
Sbjct: 488 ITYNVLINGLCKLGNFDDANELVQKMRLEGIVPDHVTYTSIIHAHLISGLLRKAEEVFSD 547

Query: 736 AAQKNVYPDAV 746
             +K ++P  V
Sbjct: 548 MLKKGIHPSVV 558



 Score =  115 bits (287), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 77/274 (28%), Positives = 137/274 (50%), Gaps = 6/274 (2%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           G   D  T+T +V    +        +L D+M+  G +P+ + Y   I    +    ++A
Sbjct: 412 GLCPDVVTFTILVRGFCQMGNLPMAKELFDEMLSRGLKPDCIAYTTRIVGELKLGNPSKA 471

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
             + ++M+  G  PD +TY  LI+   K G  D A ++ +KM+  G+ PD  TY+ II+ 
Sbjct: 472 FGMKEEMKAEGFPPDLITYNVLINGLCKLGNFDDANELVQKMRLEGIVPDHVTYTSIIHA 531

Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPD 534
              +G L+ A ++F +M+ +G  P++VTY ++I   A       A K + +MQ+ G  P+
Sbjct: 532 HLISGLLRKAEEVFSDMLKKGIHPSVVTYTVLIHSYAVRGRLDFAKKYFDEMQDKGVSPN 591

Query: 535 KVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYE 594
            +TY+ ++  L     +D A  +FAEM  K   P++  Y +L++        + A + Y+
Sbjct: 592 VITYNALIYGLCKENMMDVAYNLFAEMESKGVSPNKYTYTILINENSNLQYWQDALKLYK 651

Query: 595 AMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLL 628
            ML   ++P+  T ++L+        LS  Y LL
Sbjct: 652 DMLDREIKPDSCTHSALMK------HLSKDYKLL 679



 Score = 89.0 bits (219), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 53/177 (29%), Positives = 95/177 (53%), Gaps = 12/177 (6%)

Query: 352 RQAGFKHDEHTYTTMV------GILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSY 405
           R  G   D  TYT+++      G+L +A +      +   M++ G  P+VVTY  LIHSY
Sbjct: 514 RLEGIVPDHVTYTSIIHAHLISGLLRKAEE------VFSDMLKKGIHPSVVTYTVLIHSY 567

Query: 406 GRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDT 465
                L+ A   F +MQ  G  P+ +TY  LI    K   +DVA +++ +M++ G+SP+ 
Sbjct: 568 AVRGRLDFAKKYFDEMQDKGVSPNVITYNALIYGLCKENMMDVAYNLFAEMESKGVSPNK 627

Query: 466 FTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKL 522
           +TY+++IN      + Q A +L+ +M+++   P+  T++ ++   +K     + L+L
Sbjct: 628 YTYTILINENSNLQYWQDALKLYKDMLDREIKPDSCTHSALMKHLSKDYKLLAVLRL 684


>gi|297834714|ref|XP_002885239.1| EMB1270 [Arabidopsis lyrata subsp. lyrata]
 gi|297331079|gb|EFH61498.1| EMB1270 [Arabidopsis lyrata subsp. lyrata]
          Length = 1429

 Score =  160 bits (404), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 96/346 (27%), Positives = 175/346 (50%), Gaps = 6/346 (1%)

Query: 333 VLKQLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQ 392
           VL +    ++A+  F   R +         Y  M+G+  R+ +F    +LLD M + GC 
Sbjct: 200 VLGRWNQESLAVEIFT--RAEPTVGDRVQVYNAMMGVYSRSGKFSKAQELLDAMRQRGCV 257

Query: 393 PNVVTYNRLIHSYGRANYL--NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAM 450
           P+++++N LI++  ++  L  N  +++   ++  G  PD +TY TL+   ++   L+ A+
Sbjct: 258 PDLISFNTLINARLKSGGLTPNLVVELLDMVRNSGLRPDAITYNTLLSACSRDSNLEGAV 317

Query: 451 DMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQ 510
            +++ M+A    PD +TY+ +I+  G+ G    A +LF E+  +G  P+ VTYN ++   
Sbjct: 318 KVFEDMEAHRCQPDLWTYNAMISVYGRCGLAAEAERLFIELELKGFSPDAVTYNSLLYAF 377

Query: 511 AKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMR-RKNWVPD 569
           A+ RN +   ++Y+ MQ  GF  D++TY+ ++ + G  G LD A  ++ +M+      PD
Sbjct: 378 ARERNTEKVKEVYQQMQKMGFGKDEMTYNTIIHMYGKQGQLDLALQLYKDMKGLSGRNPD 437

Query: 570 EPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQ 629
              Y +L+D  GKA    +A      ML  G++P + T ++L+  + + G+  +A     
Sbjct: 438 AITYTVLIDSLGKANRSVEAAALMSEMLDVGIKPTLQTYSALICGYAKAGKREEAEDTFS 497

Query: 630 GMLNLGLKPSLQTYTLLLSCCTEARSPYDMGFCHELMAVSGH-PAH 674
            ML  G KP    Y+++L               +  M   GH P+H
Sbjct: 498 CMLRSGTKPDNLAYSVMLDVLLRGNETRKAWVLYRDMISDGHTPSH 543



 Score =  142 bits (358), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 86/289 (29%), Positives = 138/289 (47%), Gaps = 2/289 (0%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           R +G + D  TY T++    R        K+ + M    CQP++ TYN +I  YGR    
Sbjct: 289 RNSGLRPDAITYNTLLSACSRDSNLEGAVKVFEDMEAHRCQPDLWTYNAMISVYGRCGLA 348

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
            EA  +F ++++ G  PD VTY +L+   A+    +   ++Y++MQ  G   D  TY+ I
Sbjct: 349 AEAERLFIELELKGFSPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTYNTI 408

Query: 472 INCLGKAGHLQAAHQLFCEMVN-QGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAG 530
           I+  GK G L  A QL+ +M    G  P+ +TY ++I    KA     A  L  +M + G
Sbjct: 409 IHMYGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRSVEAAALMSEMLDVG 468

Query: 531 FEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAW 590
            +P   TYS ++      G  +EAE  F+ M R    PD   Y +++D+  +    RKAW
Sbjct: 469 IKPTLQTYSALICGYAKAGKREEAEDTFSCMLRSGTKPDNLAYSVMLDVLLRGNETRKAW 528

Query: 591 EWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNL-GLKP 638
             Y  M+  G  P+      ++   ++  +  D    ++ M  L G+ P
Sbjct: 529 VLYRDMISDGHTPSHSLYELMILGLMKENRSDDVQKTIRDMEELCGMNP 577



 Score =  120 bits (301), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 75/307 (24%), Positives = 148/307 (48%)

Query: 352  RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
            RQ+G   D  T+ +++        +     + + M+RDG  P V + N+L+H+      L
Sbjct: 779  RQSGRTPDLKTWNSLMSAYAECGCYERARAIFNTMMRDGPSPTVESINKLLHALCVDGRL 838

Query: 412  NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
             E   V +++Q +G +  + +   ++D  A+AG +     +Y  M+AAG  P    Y ++
Sbjct: 839  EELYVVVEELQDMGFKISKSSILLMLDAFARAGNIFEVNKIYSSMKAAGYLPTIRLYRMM 898

Query: 472  INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF 531
            I  L K   ++ A  +  EM        L  +N M+ +     +Y+  +++Y+ ++ +G 
Sbjct: 899  IELLCKGKRVRDAEIMVSEMEEANFKVELAIWNSMLKMYTVIEDYKKTVQVYQRIKESGL 958

Query: 532  EPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWE 591
            EPD+ TY+ ++ +       +E  ++  +MR     P    Y  L+  +GK   + +A +
Sbjct: 959  EPDETTYNTLIIMYCRDRRPEEGYSLMQQMRNLGLDPKLDTYKSLISAFGKQKCLEQAEQ 1018

Query: 592  WYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCT 651
             +E +L  GL+ +    ++++      G  S A  LLQ M N G++P+L T  LL+   +
Sbjct: 1019 LFEELLSKGLKLDRSFYHTMMKISRDSGSDSKAEKLLQMMKNAGIEPTLATMHLLMVSYS 1078

Query: 652  EARSPYD 658
             + +P +
Sbjct: 1079 SSGNPQE 1085



 Score =  106 bits (264), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 73/296 (24%), Positives = 140/296 (47%), Gaps = 19/296 (6%)

Query: 390  GCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVA 449
             C P    Y  +I +YG+     +A  V   ++  G  PD  T+ +L+  +A+ G  + A
Sbjct: 750  ACSP---MYTDIIEAYGKLKLWQKAESVVGNLRQSGRTPDLKTWNSLMSAYAECGCYERA 806

Query: 450  MDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIAL 509
              ++  M   G SP   + + +++ L   G L+  + +  E+ + G   +  +  +M+  
Sbjct: 807  RAIFNTMMRDGPSPTVESINKLLHALCVDGRLEELYVVVEELQDMGFKISKSSILLMLDA 866

Query: 510  QAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPD 569
             A+A N     K+Y  M+ AG+ P    Y +++E+L     + +AE + +EM   N+  +
Sbjct: 867  FARAGNIFEVNKIYSSMKAAGYLPTIRLYRMMIELLCKGKRVRDAEIMVSEMEEANFKVE 926

Query: 570  EPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQ 629
              ++  ++ ++    + +K  + Y+ + ++GL P+  T N+L+  + R  +  + Y L+Q
Sbjct: 927  LAIWNSMLKMYTVIEDYKKTVQVYQRIKESGLEPDETTYNTLIIMYCRDRRPEEGYSLMQ 986

Query: 630  GMLNLGLKPSLQTYTLLLS------CCTEARSPY----------DMGFCHELMAVS 669
             M NLGL P L TY  L+S      C  +A   +          D  F H +M +S
Sbjct: 987  QMRNLGLDPKLDTYKSLISAFGKQKCLEQAEQLFEELLSKGLKLDRSFYHTMMKIS 1042



 Score =  100 bits (249), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 104/497 (20%), Positives = 203/497 (40%), Gaps = 54/497 (10%)

Query: 352  RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
            + AG+      Y  M+ +L + ++      ++ +M     +  +  +N ++  Y      
Sbjct: 884  KAAGYLPTIRLYRMMIELLCKGKRVRDAEIMVSEMEEANFKVELAIWNSMLKMYTVIEDY 943

Query: 412  NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
             + + V+++++  G EPD  TY TLI ++ +    +    + ++M+  GL P   TY  +
Sbjct: 944  KKTVQVYQRIKESGLEPDETTYNTLIIMYCRDRRPEEGYSLMQQMRNLGLDPKLDTYKSL 1003

Query: 472  INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF 531
            I+  GK   L+ A QLF E++++G   +   Y+ M+ +   + +   A KL + M+NAG 
Sbjct: 1004 ISAFGKQKCLEQAEQLFEELLSKGLKLDRSFYHTMMKISRDSGSDSKAEKLLQMMKNAGI 1063

Query: 532  EPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWE 591
            EP   T  ++M      G   EAE V + ++          Y  ++D + ++ + +   E
Sbjct: 1064 EPTLATMHLLMVSYSSSGNPQEAEKVLSNLKNTEVELTTLPYSSVIDAYLRSKDYKSGIE 1123

Query: 592  WYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCT 651
                M + GL P+    + + + F+R    S              K   +   LL     
Sbjct: 1124 RLLEMKKEGLEPD----HRIWTCFVRAASFS--------------KEKSEVMLLL----- 1160

Query: 652  EARSPYDMGFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRESKRG 711
              ++  D+GF   +  + G P  +              V +  G F ++   ED  +   
Sbjct: 1161 --KALQDIGFDIPIRLLGGRPELL--------------VSEVDGCFEKLKSIED-NAALN 1203

Query: 712  LVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAVKEKGMSYWLINLHVMSDGTAVIALS 771
              +A+++ L    L+  +  V+++A ++ ++   V       W  +   +S G A+ A  
Sbjct: 1204 FANALLNLLWAFELRATSSWVFQLAIKRGIFSLDVFRVADKDWGADFRRLSGGAALDA-- 1261

Query: 772  RTLAWFRKQMLISGVGPSRIDIVTGWGRRSRVTGTSLVRQAVQELLHMFSFPFFTENGNS 831
             +L  + +        P  + ++TG    +   G SL +     L  M S PF      +
Sbjct: 1262 -SLEGYPE-------SPKSVVLITG---TAEYNGVSLDKTLKACLWEMGS-PFLPCKTRT 1309

Query: 832  GCFVGCGEPLNKWLLQS 848
            G  V     L  WL  S
Sbjct: 1310 GLLVAKAHSLRMWLKDS 1326



 Score = 80.9 bits (198), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 75/345 (21%), Positives = 144/345 (41%), Gaps = 11/345 (3%)

Query: 369 ILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEP 428
           +L +   F    + L   + +G +    T   ++ SY  +   +EA ++ + ++      
Sbjct: 583 VLVKGECFDLAARQLKVAITNGYELENDTLLSILGSYSSSGRHSEAFELLEFLKEHASGS 642

Query: 429 DRVTYCTLIDIHAKAGFLDVAMDMYKK---MQAAGLSPDTFTYSVIINCLGKAGHLQAAH 485
            R+    LI +H K   +  A+D Y     +        T  Y  +++C     H   A 
Sbjct: 643 KRLINEALIVLHCKVNNIGAALDEYLADPCVHGWCFGGSTM-YETLLHCCVANEHYAEAS 701

Query: 486 QLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFE-PDKVTYSIVMEV 544
           Q+F E+   GC P+      M+ +  K    ++A ++    +  GF       Y+ ++E 
Sbjct: 702 QVFSELRLSGCEPSESVCKSMVVVYCKLGFPETAYQVVNQAETKGFHFACSPMYTDIIEA 761

Query: 545 LGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPN 604
            G      +AE+V   +R+    PD   +  L+  + + G   +A   +  M++ G  P 
Sbjct: 762 YGKLKLWQKAESVVGNLRQSGRTPDLKTWNSLMSAYAECGCYERARAIFNTMMRDGPSPT 821

Query: 605 VPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGFCHE 664
           V + N LL A    G+L + Y +++ + ++G K S  +  L+L     A + +++   + 
Sbjct: 822 VESINKLLHALCVDGRLEELYVVVEELQDMGFKISKSSILLMLDAFARAGNIFEVNKIYS 881

Query: 665 LMAVSGH-PAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRES 708
            M  +G+ P       M      G+ VRD      E+M SE  E+
Sbjct: 882 SMKAAGYLPTIRLYRMMIELLCKGKRVRDA-----EIMVSEMEEA 921



 Score = 65.9 bits (159), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 39/136 (28%), Positives = 67/136 (49%)

Query: 342 VALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRL 401
           +AL  +  ++  +G   D  TYT ++  LG+A +      L+ +M+  G +P + TY+ L
Sbjct: 420 LALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRSVEAAALMSEMLDVGIKPTLQTYSAL 479

Query: 402 IHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGL 461
           I  Y +A    EA D F  M   G +PD + Y  ++D+  +      A  +Y+ M + G 
Sbjct: 480 ICGYAKAGKREEAEDTFSCMLRSGTKPDNLAYSVMLDVLLRGNETRKAWVLYRDMISDGH 539

Query: 462 SPDTFTYSVIINCLGK 477
           +P    Y ++I  L K
Sbjct: 540 TPSHSLYELMILGLMK 555


>gi|413949109|gb|AFW81758.1| hypothetical protein ZEAMMB73_033635 [Zea mays]
          Length = 691

 Score =  160 bits (404), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 140/499 (28%), Positives = 223/499 (44%), Gaps = 51/499 (10%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           R AG   +  TY T+V    RA +     +L+  M+  G +PN+VT+N +++   +A  +
Sbjct: 177 RGAGCGPNVVTYNTLVAAFFRAGEVDGAERLVGMMLDGGLKPNLVTFNSMVNGMCKAGKM 236

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
            +A  VF +M   G  PD V+Y TL+  + KAG    A+ ++ +M   G+ PD  T++ +
Sbjct: 237 EDARKVFDEMMREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPDVVTFTSL 296

Query: 472 INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF 531
           I+ + KAG+L+ A  L  +M  +G   N VT+  +I    K      AL   R M+    
Sbjct: 297 IHVMCKAGNLEWAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDALLAVRGMRQCRI 356

Query: 532 EPDKVTYSIVMEVLGHC--GYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKA 589
           +P  V Y+ ++   G+C  G +DEA  +  EM  K   PD   Y  ++  + K  +   A
Sbjct: 357 KPSVVCYNALIN--GYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAYCKNCDTHSA 414

Query: 590 WEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSC 649
           +E  + ML+ G+ P+  T +SL+       +LSDA+ L + M+ LGL+P   TYT L+  
Sbjct: 415 FELNQQMLEKGVLPDAITYSSLIRVLCEEKRLSDAHVLFKNMIKLGLQPDEFTYTSLIDG 474

Query: 650 -CTEARSPYDMGFCHELMAVSG---------------------HPAHMFLLSMPSPGPDG 687
            C E      +   H+ M  +G                       A   L  +    P  
Sbjct: 475 HCKEGNVERALSL-HDKMVKAGVLPDVVTYSVLINGLSKSARAMEAQQLLFKLYHEEPIP 533

Query: 688 QNVRDHVGSFLEMMHSEDRESKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAVK 747
            N +     +  +MH   +   + ++  +  F  K GL  EA  V++    +N   D   
Sbjct: 534 ANTK-----YDALMHCCRKAELKSVLALLKGFCMK-GLMNEADKVYQSMLDRNWNLD--- 584

Query: 748 EKGMSY-WLINLHVMSDGTAVIALSRTLAWFRKQMLISGVGP---SRIDIVTGWGRRSRV 803
             G  Y  LI+ H  + G  + ALS     F KQML  G  P   S I ++ G      V
Sbjct: 585 --GSVYSVLIHGHCRA-GNVMKALS-----FHKQMLQRGFAPNSTSTISLIRGLFENGMV 636

Query: 804 TGTSLVRQAVQELLHMFSF 822
                  Q +Q+LL+  S 
Sbjct: 637 VEAD---QVIQQLLNCCSL 652



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 87/268 (32%), Positives = 146/268 (54%)

Query: 381 KLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIH 440
           +  D M+ DG  PNV TYN LI +     +  EAL + + M+  GC P+ VTY TL+   
Sbjct: 136 RFFDSMLSDGVAPNVYTYNILIRALCGRGHRKEALSILRDMRGAGCGPNVVTYNTLVAAF 195

Query: 441 AKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNL 500
            +AG +D A  +   M   GL P+  T++ ++N + KAG ++ A ++F EM+ +G  P+ 
Sbjct: 196 FRAGEVDGAERLVGMMLDGGLKPNLVTFNSMVNGMCKAGKMEDARKVFDEMMREGLAPDG 255

Query: 501 VTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAE 560
           V+YN ++    KA     AL ++ +M   G  PD VT++ ++ V+   G L+ A  +  +
Sbjct: 256 VSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPDVVTFTSLIHVMCKAGNLEWAVTLVRQ 315

Query: 561 MRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQ 620
           MR +    +E  +  L+D + K G +  A      M Q  ++P+V   N+L++ +  VG+
Sbjct: 316 MRERGLQMNEVTFTALIDGFCKKGFLDDALLAVRGMRQCRIKPSVVCYNALINGYCMVGR 375

Query: 621 LSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
           + +A  LL  M   GLKP + TY+ ++S
Sbjct: 376 MDEARELLHEMEAKGLKPDVVTYSTIIS 403



 Score =  104 bits (260), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 79/300 (26%), Positives = 126/300 (42%), Gaps = 50/300 (16%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           G K D  TY+T++    +     +  +L  QM+  G  P+ +TY+ LI        L++A
Sbjct: 390 GLKPDVVTYSTIISAYCKNCDTHSAFELNQQMLEKGVLPDAITYSSLIRVLCEEKRLSDA 449

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
             +FK M  +G +PD  TY +LID H K G ++ A+ ++ KM  AG+ PD  TYSV+IN 
Sbjct: 450 HVLFKNMIKLGLQPDEFTYTSLIDGHCKEGNVERALSLHDKMVKAGVLPDVVTYSVLING 509

Query: 475 LGKAGHLQAAHQLFCEMVNQGCIP------------------------------------ 498
           L K+     A QL  ++ ++  IP                                    
Sbjct: 510 LSKSARAMEAQQLLFKLYHEEPIPANTKYDALMHCCRKAELKSVLALLKGFCMKGLMNEA 569

Query: 499 ------------NL--VTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEV 544
                       NL    Y+++I    +A N   AL  ++ M   GF P+  +   ++  
Sbjct: 570 DKVYQSMLDRNWNLDGSVYSVLIHGHCRAGNVMKALSFHKQMLQRGFAPNSTSTISLIRG 629

Query: 545 LGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPN 604
           L   G + EA+ V  ++     + D      L+DL    GNV    +    M + GL P+
Sbjct: 630 LFENGMVVEADQVIQQLLNCCSLADAEASKALIDLNLNEGNVDAVLDVLHGMAKDGLLPS 689



 Score = 48.1 bits (113), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 56/252 (22%), Positives = 98/252 (38%), Gaps = 60/252 (23%)

Query: 335 KQLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLL---DQMVRDGC 391
           K+L D  V   F N ++   G + DE TYT+++   G  ++ G + + L   D+MV+ G 
Sbjct: 444 KRLSDAHVL--FKNMIK--LGLQPDEFTYTSLID--GHCKE-GNVERALSLHDKMVKAGV 496

Query: 392 QPNVVTYNRLIHSYGRA------------------------------------------- 408
            P+VVTY+ LI+   ++                                           
Sbjct: 497 LPDVVTYSVLINGLSKSARAMEAQQLLFKLYHEEPIPANTKYDALMHCCRKAELKSVLAL 556

Query: 409 -------NYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGL 461
                    +NEA  V++ M       D   Y  LI  H +AG +  A+  +K+M   G 
Sbjct: 557 LKGFCMKGLMNEADKVYQSMLDRNWNLDGSVYSVLIHGHCRAGNVMKALSFHKQMLQRGF 616

Query: 462 SPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALK 521
           +P++ +   +I  L + G +  A Q+  +++N   + +      +I L     N  + L 
Sbjct: 617 APNSTSTISLIRGLFENGMVVEADQVIQQLLNCCSLADAEASKALIDLNLNEGNVDAVLD 676

Query: 522 LYRDMQNAGFEP 533
           +   M   G  P
Sbjct: 677 VLHGMAKDGLLP 688


>gi|255540825|ref|XP_002511477.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223550592|gb|EEF52079.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 754

 Score =  160 bits (404), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 98/356 (27%), Positives = 174/356 (48%), Gaps = 36/356 (10%)

Query: 336 QLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRAR--------------------- 374
           Q  D   +L  F +++RQ   K +EH YT ++ +LGR                       
Sbjct: 118 QRGDWQRSLRLFKYMQRQIWCKPNEHIYTIIISLLGREGLLEKSTEIFEEMPTHGVPRSV 177

Query: 375 --------------QFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEAL-DVFK 419
                         Q+    +LL++M ++   P+++TYN +I+S  R     E L  +F 
Sbjct: 178 FSYTALINSYGRHGQYEVSLELLERMKKEKVTPSILTYNTVINSCARGGLNWEGLLSLFA 237

Query: 420 QMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAG 479
           +M+  G +PD +TY TL++  A  G  D A  +++ M   G+ PD  TY  ++   GK  
Sbjct: 238 EMRHEGIQPDIITYNTLLNACANRGLGDEAEMVFRTMNEGGMVPDITTYRNLVETFGKLN 297

Query: 480 HLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYS 539
            L+   +L  EM + G +P++ +YN+++   A   + + A+ ++R MQ A   P+ VTYS
Sbjct: 298 KLEKVSELLKEMESSGNLPDISSYNVLLEAYASKGDIRHAMGVFRQMQEARCVPNAVTYS 357

Query: 540 IVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQA 599
           +++ + G  G  D+   +F EM+  N  PD   Y +L++++G+ G  ++    +  M++ 
Sbjct: 358 MLLNLYGGHGRYDDVRELFLEMKVSNTEPDVGTYNVLIEVFGEGGYFKEVVTLFHDMVEE 417

Query: 600 GLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARS 655
            + PN+ T   L+ A  + G   DA  +L  M   G+ PS + YT ++    +A S
Sbjct: 418 NVEPNMGTYEGLIYACGKGGLHEDAKKILLHMDEKGIVPSTKAYTGVIEAYGQAAS 473



 Score =  139 bits (350), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 111/460 (24%), Positives = 200/460 (43%), Gaps = 47/460 (10%)

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
           + G   D  TY  +V   G+  +   +++LL +M   G  P++ +YN L+ +Y     + 
Sbjct: 276 EGGMVPDITTYRNLVETFGKLNKLEKVSELLKEMESSGNLPDISSYNVLLEAYASKGDIR 335

Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
            A+ VF+QMQ   C P+ VTY  L++++   G  D   +++ +M+ +   PD  TY+V+I
Sbjct: 336 HAMGVFRQMQEARCVPNAVTYSMLLNLYGGHGRYDDVRELFLEMKVSNTEPDVGTYNVLI 395

Query: 473 NCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFE 532
              G+ G+ +    LF +MV +   PN+ TY  +I    K   ++ A K+   M   G  
Sbjct: 396 EVFGEGGYFKEVVTLFHDMVEENVEPNMGTYEGLIYACGKGGLHEDAKKILLHMDEKGIV 455

Query: 533 PDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEW 592
           P    Y+ V+E  G     +EA  +F  M      P    Y  L++++ + G  +++   
Sbjct: 456 PSTKAYTGVIEAYGQAASYEEALVMFNTMNEMGSKPTVETYNSLINMFARGGLYKESEAI 515

Query: 593 YEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSC-CT 651
              M ++G+  +  + N ++  + + GQ  +A      +     +P  +T+  +LS  CT
Sbjct: 516 MWKMGESGVARDRDSFNGVIEGYRQGGQFEEAIKTYVELEKARFQPDERTFEAVLSVYCT 575

Query: 652 ------------EARS----PYDMGFCHELMAVSGHP-----AHMFLLSMPSPGPDGQNV 690
                       E R+    P  M +C  ++AV         A+  L  M +      N+
Sbjct: 576 AGLVDESEEQFREIRASGILPSVMCYCM-MIAVYARSNRWDDAYEVLDEMVTNKV--SNI 632

Query: 691 RDHVGSFLEMMHSEDRESKRGLVDAVVDFLHKSGL-------------------KEEAGS 731
              VG    M    D  S   +V+ V D L+  G                    KE A  
Sbjct: 633 HQVVGKM--MKGDYDDYSNWQMVEYVFDKLNSEGCGLGMRFYNTLLEALWWLGQKERAAR 690

Query: 732 VWEVAAQKNVYPDAVKEKGMSYWLINLHVMSDGTAVIALS 771
           V   A ++ ++P+  ++  +  W +++H M +G A  A+S
Sbjct: 691 VLSEAIKRGLFPELFRKSKLV-WSVDVHRMWEGGACTAIS 729



 Score =  139 bits (349), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 80/288 (27%), Positives = 146/288 (50%), Gaps = 1/288 (0%)

Query: 362 TYTTMVGILGRA-RQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQ 420
           TY T++    R    +  +  L  +M  +G QP+++TYN L+++       +EA  VF+ 
Sbjct: 214 TYNTVINSCARGGLNWEGLLSLFAEMRHEGIQPDIITYNTLLNACANRGLGDEAEMVFRT 273

Query: 421 MQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGH 480
           M   G  PD  TY  L++   K   L+   ++ K+M+++G  PD  +Y+V++      G 
Sbjct: 274 MNEGGMVPDITTYRNLVETFGKLNKLEKVSELLKEMESSGNLPDISSYNVLLEAYASKGD 333

Query: 481 LQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSI 540
           ++ A  +F +M    C+PN VTY++++ L      Y    +L+ +M+ +  EPD  TY++
Sbjct: 334 IRHAMGVFRQMQEARCVPNAVTYSMLLNLYGGHGRYDDVRELFLEMKVSNTEPDVGTYNV 393

Query: 541 VMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAG 600
           ++EV G  GY  E   +F +M  +N  P+   Y  L+   GK G    A +    M + G
Sbjct: 394 LIEVFGEGGYFKEVVTLFHDMVEENVEPNMGTYEGLIYACGKGGLHEDAKKILLHMDEKG 453

Query: 601 LRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
           + P+      ++ A+ +     +A  +   M  +G KP+++TY  L++
Sbjct: 454 IVPSTKAYTGVIEAYGQAASYEEALVMFNTMNEMGSKPTVETYNSLIN 501



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 75/280 (26%), Positives = 137/280 (48%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           R  G + D  TY T++              +   M   G  P++ TY  L+ ++G+ N L
Sbjct: 240 RHEGIQPDIITYNTLLNACANRGLGDEAEMVFRTMNEGGMVPDITTYRNLVETFGKLNKL 299

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
            +  ++ K+M+  G  PD  +Y  L++ +A  G +  AM ++++MQ A   P+  TYS++
Sbjct: 300 EKVSELLKEMESSGNLPDISSYNVLLEAYASKGDIRHAMGVFRQMQEARCVPNAVTYSML 359

Query: 472 INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF 531
           +N  G  G      +LF EM      P++ TYN++I +  +   ++  + L+ DM     
Sbjct: 360 LNLYGGHGRYDDVRELFLEMKVSNTEPDVGTYNVLIEVFGEGGYFKEVVTLFHDMVEENV 419

Query: 532 EPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWE 591
           EP+  TY  ++   G  G  ++A+ +   M  K  VP    Y  +++ +G+A +  +A  
Sbjct: 420 EPNMGTYEGLIYACGKGGLHEDAKKILLHMDEKGIVPSTKAYTGVIEAYGQAASYEEALV 479

Query: 592 WYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGM 631
            +  M + G +P V T NSL++ F R G   ++  ++  M
Sbjct: 480 MFNTMNEMGSKPTVETYNSLINMFARGGLYKESEAIMWKM 519


>gi|15233259|ref|NP_188222.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75274469|sp|Q9LW84.1|PP236_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g16010
 gi|9294448|dbj|BAB02667.1| unnamed protein product [Arabidopsis thaliana]
 gi|332642241|gb|AEE75762.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 642

 Score =  160 bits (404), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 111/387 (28%), Positives = 188/387 (48%), Gaps = 8/387 (2%)

Query: 267 VSERFSKPS-REMKIPAGLAPFSRHFASTGNVVESVSRILRQWKWGPLAEEALGNTNYSM 325
           + + FS P+  E + P      SR   S   + E   RI++ +KWGP AE+AL      +
Sbjct: 32  IVQMFSVPNHEESEKPQEKWKLSRKDPSVRMLDERFIRIVKIFKWGPDAEKALEVLKLKV 91

Query: 326 DAYQANQVLKQLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQ 385
           D      +L+   +  V + FF W  ++  F+HD  TY T++  L  AR +G + + + +
Sbjct: 92  DHRLVRSILEIDVEINVKIQFFKWAGKRRNFQHDCSTYMTLIRCLEEARLYGEMYRTIQE 151

Query: 386 MVRD---GCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAK 442
           +VR+      P V++   L+ + GRA  +++AL VF Q +   C+P   TY ++I +  +
Sbjct: 152 VVRNTYVSVSPAVLS--ELVKALGRAKMVSKALSVFYQAKGRKCKPTSSTYNSVILMLMQ 209

Query: 443 AGFLDVAMDMYKKMQAAG-LSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLV 501
            G  +   ++Y +M   G   PDT TYS +I+   K G   +A +LF EM +    P   
Sbjct: 210 EGQHEKVHEVYTEMCNEGDCFPDTITYSALISSYEKLGRNDSAIRLFDEMKDNCMQPTEK 269

Query: 502 TYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEM 561
            Y  ++ +  K    + AL L+ +M+ AG  P   TY+ +++ LG  G +DEA   + +M
Sbjct: 270 IYTTLLGIYFKVGKVEKALDLFEEMKRAGCSPTVYTYTELIKGLGKAGRVDEAYGFYKDM 329

Query: 562 RRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSA-FLRVGQ 620
            R    PD      L+++ GK G V +    +  M      P V + N+++ A F     
Sbjct: 330 LRDGLTPDVVFLNNLMNILGKVGRVEELTNVFSEMGMWRCTPTVVSYNTVIKALFESKAH 389

Query: 621 LSDAYHLLQGMLNLGLKPSLQTYTLLL 647
           +S+       M    + PS  TY++L+
Sbjct: 390 VSEVSSWFDKMKADSVSPSEFTYSILI 416



 Score =  145 bits (367), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 103/340 (30%), Positives = 169/340 (49%), Gaps = 16/340 (4%)

Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLI 402
           AL  F  ++R AG     +TYT ++  LG+A +          M+RDG  P+VV  N L+
Sbjct: 287 ALDLFEEMKR-AGCSPTVYTYTELIKGLGKAGRVDEAYGFYKDMLRDGLTPDVVFLNNLM 345

Query: 403 HSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLID--IHAKAGFLDVAMDMYKKMQAAG 460
           +  G+   + E  +VF +M +  C P  V+Y T+I     +KA   +V+   + KM+A  
Sbjct: 346 NILGKVGRVEELTNVFSEMGMWRCTPTVVSYNTVIKALFESKAHVSEVS-SWFDKMKADS 404

Query: 461 LSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSAL 520
           +SP  FTYS++I+   K   ++ A  L  EM  +G  P    Y  +I    KA+ Y++A 
Sbjct: 405 VSPSEFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAAN 464

Query: 521 KLYRDM-QNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDL 579
           +L++++ +N G    +V Y+++++  G CG L EA  +F EM+ +   PD   Y  L+  
Sbjct: 465 ELFKELKENFGNVSSRV-YAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNALMSG 523

Query: 580 WGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPS 639
             KAG + +A      M + G R ++ + N +L+ F R G    A  + + + + G+KP 
Sbjct: 524 MVKAGMINEANSLLRKMEENGCRADINSHNIILNGFARTGVPRRAIEMFETIKHSGIKPD 583

Query: 640 LQTYTLLLSCCTEA----------RSPYDMGFCHELMAVS 669
             TY  LL C   A          R   D GF ++ +  S
Sbjct: 584 GVTYNTLLGCFAHAGMFEEAARMMREMKDKGFEYDAITYS 623



 Score =  126 bits (317), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 85/329 (25%), Positives = 155/329 (47%), Gaps = 37/329 (11%)

Query: 362 TYTTMVGILGRARQFGAINKLLDQMVRDG-CQPNVVTYNRLIHSYGRANYLNEALDVFKQ 420
           TY +++ +L +  Q   ++++  +M  +G C P+ +TY+ LI SY +    + A+ +F +
Sbjct: 199 TYNSVILMLMQEGQHEKVHEVYTEMCNEGDCFPDTITYSALISSYEKLGRNDSAIRLFDE 258

Query: 421 MQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGH 480
           M+    +P    Y TL+ I+ K G ++ A+D++++M+ AG SP  +TY+ +I  LGKAG 
Sbjct: 259 MKDNCMQPTEKIYTTLLGIYFKVGKVEKALDLFEEMKRAGCSPTVYTYTELIKGLGKAGR 318

Query: 481 LQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSI 540
           +  A+  + +M+  G  P++V  N ++ +  K    +    ++ +M      P  V+Y+ 
Sbjct: 319 VDEAYGFYKDMLRDGLTPDVVFLNNLMNILGKVGRVEELTNVFSEMGMWRCTPTVVSYNT 378

Query: 541 VMEVLGHC-GYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQA 599
           V++ L     ++ E  + F +M+  +  P E  Y +L+D + K   V KA    E M + 
Sbjct: 379 VIKALFESKAHVSEVSSWFDKMKADSVSPSEFTYSILIDGYCKTNRVEKALLLLEEMDEK 438

Query: 600 GLRPNVPTCNSLLSA-----------------------------------FLRVGQLSDA 624
           G  P      SL++A                                   F + G+LS+A
Sbjct: 439 GFPPCPAAYCSLINALGKAKRYEAANELFKELKENFGNVSSRVYAVMIKHFGKCGKLSEA 498

Query: 625 YHLLQGMLNLGLKPSLQTYTLLLSCCTEA 653
             L   M N G  P +  Y  L+S   +A
Sbjct: 499 VDLFNEMKNQGSGPDVYAYNALMSGMVKA 527



 Score =  108 bits (270), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 55/195 (28%), Positives = 109/195 (55%)

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
           + GF      Y +++  LG+A+++ A N+L  ++  +    +   Y  +I  +G+   L+
Sbjct: 437 EKGFPPCPAAYCSLINALGKAKRYEAANELFKELKENFGNVSSRVYAVMIKHFGKCGKLS 496

Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
           EA+D+F +M+  G  PD   Y  L+    KAG ++ A  + +KM+  G   D  ++++I+
Sbjct: 497 EAVDLFNEMKNQGSGPDVYAYNALMSGMVKAGMINEANSLLRKMEENGCRADINSHNIIL 556

Query: 473 NCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFE 532
           N   + G  + A ++F  + + G  P+ VTYN ++   A A  ++ A ++ R+M++ GFE
Sbjct: 557 NGFARTGVPRRAIEMFETIKHSGIKPDGVTYNTLLGCFAHAGMFEEAARMMREMKDKGFE 616

Query: 533 PDKVTYSIVMEVLGH 547
            D +TYS +++ +G+
Sbjct: 617 YDAITYSSILDAVGN 631



 Score =  105 bits (261), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 71/263 (26%), Positives = 120/263 (45%), Gaps = 1/263 (0%)

Query: 362 TYTTMVGILGRAR-QFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQ 420
           +Y T++  L  ++     ++   D+M  D   P+  TY+ LI  Y + N + +AL + ++
Sbjct: 375 SYNTVIKALFESKAHVSEVSSWFDKMKADSVSPSEFTYSILIDGYCKTNRVEKALLLLEE 434

Query: 421 MQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGH 480
           M   G  P    YC+LI+   KA   + A +++K+++    +  +  Y+V+I   GK G 
Sbjct: 435 MDEKGFPPCPAAYCSLINALGKAKRYEAANELFKELKENFGNVSSRVYAVMIKHFGKCGK 494

Query: 481 LQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSI 540
           L  A  LF EM NQG  P++  YN +++   KA     A  L R M+  G   D  +++I
Sbjct: 495 LSEAVDLFNEMKNQGSGPDVYAYNALMSGMVKAGMINEANSLLRKMEENGCRADINSHNI 554

Query: 541 VMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAG 600
           ++      G    A  +F  ++     PD   Y  L+  +  AG   +A      M   G
Sbjct: 555 ILNGFARTGVPRRAIEMFETIKHSGIKPDGVTYNTLLGCFAHAGMFEEAARMMREMKDKG 614

Query: 601 LRPNVPTCNSLLSAFLRVGQLSD 623
              +  T +S+L A   V    D
Sbjct: 615 FEYDAITYSSILDAVGNVDHEKD 637



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 40/138 (28%), Positives = 74/138 (53%), Gaps = 1/138 (0%)

Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLI 402
           A+  FN ++ Q G   D + Y  ++  + +A      N LL +M  +GC+ ++ ++N ++
Sbjct: 498 AVDLFNEMKNQ-GSGPDVYAYNALMSGMVKAGMINEANSLLRKMEENGCRADINSHNIIL 556

Query: 403 HSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLS 462
           + + R      A+++F+ ++  G +PD VTY TL+   A AG  + A  M ++M+  G  
Sbjct: 557 NGFARTGVPRRAIEMFETIKHSGIKPDGVTYNTLLGCFAHAGMFEEAARMMREMKDKGFE 616

Query: 463 PDTFTYSVIINCLGKAGH 480
            D  TYS I++ +G   H
Sbjct: 617 YDAITYSSILDAVGNVDH 634


>gi|28393724|gb|AAO42273.1| unknown protein [Arabidopsis thaliana]
          Length = 642

 Score =  160 bits (404), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 111/387 (28%), Positives = 188/387 (48%), Gaps = 8/387 (2%)

Query: 267 VSERFSKPS-REMKIPAGLAPFSRHFASTGNVVESVSRILRQWKWGPLAEEALGNTNYSM 325
           + + FS P+  E + P      SR   S   + E   RI++ +KWGP AE+AL      +
Sbjct: 32  IVQMFSVPNHEESEKPQEKWKLSRKDPSVRMLDERFIRIVKIFKWGPDAEKALEVLKLKV 91

Query: 326 DAYQANQVLKQLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQ 385
           D      +L+   +  V + FF W  ++  F+HD  TY T++  L  AR +G + + + +
Sbjct: 92  DHRLVRSILEIDVEINVKIQFFKWAGKRRNFQHDCSTYMTLIRCLEEARLYGEMYRTIQE 151

Query: 386 MVRD---GCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAK 442
           +VR+      P V++   L+ + GRA  +++AL VF Q +   C+P   TY ++I +  +
Sbjct: 152 VVRNTYVSVSPAVLS--ELVKALGRAKMVSKALSVFYQAKGRKCKPTSSTYNSVILMLMQ 209

Query: 443 AGFLDVAMDMYKKMQAAG-LSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLV 501
            G  +   ++Y +M   G   PDT TYS +I+   K G   +A +LF EM +    P   
Sbjct: 210 EGQHEKVHEVYTEMCNEGDCFPDTITYSALISSYEKLGRNDSAIRLFDEMKDNCMQPTEK 269

Query: 502 TYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEM 561
            Y  ++ +  K    + AL L+ +M+ AG  P   TY+ +++ LG  G +DEA   + +M
Sbjct: 270 IYTTLLGIYFKVGKVEKALDLFEEMKRAGCSPTVYTYTELIKGLGKAGRVDEAYGFYKDM 329

Query: 562 RRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSA-FLRVGQ 620
            R    PD      L+++ GK G V +    +  M      P V + N+++ A F     
Sbjct: 330 LRDGLTPDVVFLNNLMNILGKVGRVEELTNVFSEMGMWRCTPTVVSYNTVIKALFESKAH 389

Query: 621 LSDAYHLLQGMLNLGLKPSLQTYTLLL 647
           +S+       M    + PS  TY++L+
Sbjct: 390 VSEVSSWFDKMKADSVSPSEFTYSILI 416



 Score =  145 bits (367), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 103/340 (30%), Positives = 169/340 (49%), Gaps = 16/340 (4%)

Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLI 402
           AL  F  ++R AG     +TYT ++  LG+A +          M+RDG  P+VV  N L+
Sbjct: 287 ALDLFEEMKR-AGCSPTVYTYTELIKGLGKAGRVDEAYGFYKDMLRDGLTPDVVFLNNLM 345

Query: 403 HSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLID--IHAKAGFLDVAMDMYKKMQAAG 460
           +  G+   + E  +VF +M +  C P  V+Y T+I     +KA   +V+   + KM+A  
Sbjct: 346 NILGKVGRVEELTNVFSEMGMWRCTPTVVSYNTVIKALFESKAHVSEVS-SWFDKMKADS 404

Query: 461 LSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSAL 520
           +SP  FTYS++I+   K   ++ A  L  EM  +G  P    Y  +I    KA+ Y++A 
Sbjct: 405 VSPSEFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAAD 464

Query: 521 KLYRDM-QNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDL 579
           +L++++ +N G    +V Y+++++  G CG L EA  +F EM+ +   PD   Y  L+  
Sbjct: 465 ELFKELKENFGNVSSRV-YAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNALMSG 523

Query: 580 WGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPS 639
             KAG + +A      M + G R ++ + N +L+ F R G    A  + + + + G+KP 
Sbjct: 524 MVKAGMINEANSLLRKMEENGCRADINSHNIILNGFARTGVPRRAIEMFETIKHSGIKPD 583

Query: 640 LQTYTLLLSCCTEA----------RSPYDMGFCHELMAVS 669
             TY  LL C   A          R   D GF ++ +  S
Sbjct: 584 GVTYNTLLGCFAHAGMFEEAARMMREMKDKGFEYDAITYS 623



 Score =  126 bits (316), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 85/329 (25%), Positives = 155/329 (47%), Gaps = 37/329 (11%)

Query: 362 TYTTMVGILGRARQFGAINKLLDQMVRDG-CQPNVVTYNRLIHSYGRANYLNEALDVFKQ 420
           TY +++ +L +  Q   ++++  +M  +G C P+ +TY+ LI SY +    + A+ +F +
Sbjct: 199 TYNSVILMLMQEGQHEKVHEVYTEMCNEGDCFPDTITYSALISSYEKLGRNDSAIRLFDE 258

Query: 421 MQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGH 480
           M+    +P    Y TL+ I+ K G ++ A+D++++M+ AG SP  +TY+ +I  LGKAG 
Sbjct: 259 MKDNCMQPTEKIYTTLLGIYFKVGKVEKALDLFEEMKRAGCSPTVYTYTELIKGLGKAGR 318

Query: 481 LQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSI 540
           +  A+  + +M+  G  P++V  N ++ +  K    +    ++ +M      P  V+Y+ 
Sbjct: 319 VDEAYGFYKDMLRDGLTPDVVFLNNLMNILGKVGRVEELTNVFSEMGMWRCTPTVVSYNT 378

Query: 541 VMEVLGHC-GYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQA 599
           V++ L     ++ E  + F +M+  +  P E  Y +L+D + K   V KA    E M + 
Sbjct: 379 VIKALFESKAHVSEVSSWFDKMKADSVSPSEFTYSILIDGYCKTNRVEKALLLLEEMDEK 438

Query: 600 GLRPNVPTCNSLLSA-----------------------------------FLRVGQLSDA 624
           G  P      SL++A                                   F + G+LS+A
Sbjct: 439 GFPPCPAAYCSLINALGKAKRYEAADELFKELKENFGNVSSRVYAVMIKHFGKCGKLSEA 498

Query: 625 YHLLQGMLNLGLKPSLQTYTLLLSCCTEA 653
             L   M N G  P +  Y  L+S   +A
Sbjct: 499 VDLFNEMKNQGSGPDVYAYNALMSGMVKA 527



 Score =  106 bits (265), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 54/195 (27%), Positives = 109/195 (55%)

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
           + GF      Y +++  LG+A+++ A ++L  ++  +    +   Y  +I  +G+   L+
Sbjct: 437 EKGFPPCPAAYCSLINALGKAKRYEAADELFKELKENFGNVSSRVYAVMIKHFGKCGKLS 496

Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
           EA+D+F +M+  G  PD   Y  L+    KAG ++ A  + +KM+  G   D  ++++I+
Sbjct: 497 EAVDLFNEMKNQGSGPDVYAYNALMSGMVKAGMINEANSLLRKMEENGCRADINSHNIIL 556

Query: 473 NCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFE 532
           N   + G  + A ++F  + + G  P+ VTYN ++   A A  ++ A ++ R+M++ GFE
Sbjct: 557 NGFARTGVPRRAIEMFETIKHSGIKPDGVTYNTLLGCFAHAGMFEEAARMMREMKDKGFE 616

Query: 533 PDKVTYSIVMEVLGH 547
            D +TYS +++ +G+
Sbjct: 617 YDAITYSSILDAVGN 631



 Score =  104 bits (260), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 71/263 (26%), Positives = 120/263 (45%), Gaps = 1/263 (0%)

Query: 362 TYTTMVGILGRAR-QFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQ 420
           +Y T++  L  ++     ++   D+M  D   P+  TY+ LI  Y + N + +AL + ++
Sbjct: 375 SYNTVIKALFESKAHVSEVSSWFDKMKADSVSPSEFTYSILIDGYCKTNRVEKALLLLEE 434

Query: 421 MQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGH 480
           M   G  P    YC+LI+   KA   + A +++K+++    +  +  Y+V+I   GK G 
Sbjct: 435 MDEKGFPPCPAAYCSLINALGKAKRYEAADELFKELKENFGNVSSRVYAVMIKHFGKCGK 494

Query: 481 LQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSI 540
           L  A  LF EM NQG  P++  YN +++   KA     A  L R M+  G   D  +++I
Sbjct: 495 LSEAVDLFNEMKNQGSGPDVYAYNALMSGMVKAGMINEANSLLRKMEENGCRADINSHNI 554

Query: 541 VMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAG 600
           ++      G    A  +F  ++     PD   Y  L+  +  AG   +A      M   G
Sbjct: 555 ILNGFARTGVPRRAIEMFETIKHSGIKPDGVTYNTLLGCFAHAGMFEEAARMMREMKDKG 614

Query: 601 LRPNVPTCNSLLSAFLRVGQLSD 623
              +  T +S+L A   V    D
Sbjct: 615 FEYDAITYSSILDAVGNVDHEKD 637



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 40/138 (28%), Positives = 74/138 (53%), Gaps = 1/138 (0%)

Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLI 402
           A+  FN ++ Q G   D + Y  ++  + +A      N LL +M  +GC+ ++ ++N ++
Sbjct: 498 AVDLFNEMKNQ-GSGPDVYAYNALMSGMVKAGMINEANSLLRKMEENGCRADINSHNIIL 556

Query: 403 HSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLS 462
           + + R      A+++F+ ++  G +PD VTY TL+   A AG  + A  M ++M+  G  
Sbjct: 557 NGFARTGVPRRAIEMFETIKHSGIKPDGVTYNTLLGCFAHAGMFEEAARMMREMKDKGFE 616

Query: 463 PDTFTYSVIINCLGKAGH 480
            D  TYS I++ +G   H
Sbjct: 617 YDAITYSSILDAVGNVDH 634


>gi|225453062|ref|XP_002266822.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
           chloroplastic-like [Vitis vinifera]
          Length = 582

 Score =  160 bits (404), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 116/457 (25%), Positives = 208/457 (45%), Gaps = 31/457 (6%)

Query: 329 QANQVLKQLQDHT---------VALGFFNWLRRQA-----------GFKHDEHTYTTMVG 368
           +A++V++ L+ HT         V  GF    R +A           GF  D  TY  M+G
Sbjct: 121 KASRVMEILESHTEPDVFAYNAVISGFCKVNRIEAATQVLNRMKARGFLPDIVTYNIMIG 180

Query: 369 ILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEP 428
            L   R+ G   K+LDQ++ D C P V+TY  LI +      +NEA+ + ++M   G  P
Sbjct: 181 SLCNRRKLGLALKVLDQLLLDNCMPTVITYTILIEATIVEGGINEAMKLLEEMLARGLLP 240

Query: 429 DRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLF 488
           D  TY  +I    K G ++ A ++   + + G  PD  +Y++++      G      +L 
Sbjct: 241 DMYTYNAIIRGMCKEGMVERAAELITSLTSKGCKPDVISYNILLRAFLNQGKWDEGEKLV 300

Query: 489 CEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHC 548
            EM ++GC PN VTY+I+I+   +      A+ + + M      PD  +Y  ++  L   
Sbjct: 301 AEMFSRGCEPNKVTYSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKE 360

Query: 549 GYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTC 608
           G LD A  +   M     +PD   Y  ++    K GN  +A E +  +   G  PNV + 
Sbjct: 361 GRLDLAIGIMDYMISNGCLPDIVNYNTILAALCKNGNANQALEIFNKLRGMGCPPNVSSY 420

Query: 609 NSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSC-CTEARSPYDMGFCHELMA 667
           N+++SA    G  S A  ++  M++ G+ P   TY  L+SC C +      +G   ++  
Sbjct: 421 NTMISALWSCGDRSRALGMVPAMISKGVDPDEITYNSLISCLCRDGLVEEAIGLLDDMEQ 480

Query: 668 VSGHPA----HMFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRESKRGLVDAVVDFLHKS 723
               P     ++ LL +       + + D +G F EM+    R ++   +  +++ +  +
Sbjct: 481 SGFRPTVISYNIVLLGLCKV----RRIDDAIGMFAEMIEKGCRPNETTYI-LLIEGIGFA 535

Query: 724 GLKEEAGSVWEVAAQKNVYP-DAVKEKGMSYWLINLH 759
           G + EA  +      ++V   D+ K    ++ +++++
Sbjct: 536 GWRTEAMELANSLFSRDVISQDSFKRLNKTFPMLDVY 572



 Score = 78.2 bits (191), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 69/310 (22%), Positives = 130/310 (41%), Gaps = 36/310 (11%)

Query: 436 LIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQG 495
           L++   KAG  + ++   + +   G +PD    + +I       +++ A ++  E++   
Sbjct: 74  LLNRSCKAGKFNESLYFLECLVNKGYTPDVILCTKLIKGFFNFKNIEKASRVM-EILESH 132

Query: 496 CIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAE 555
             P++  YN +I+   K    ++A ++   M+  GF PD VTY+I++  L +   L  A 
Sbjct: 133 TEPDVFAYNAVISGFCKVNRIEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRRKLGLAL 192

Query: 556 AVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAF 615
            V  ++   N +P    Y +L++     G + +A +  E ML  GL P++ T N+++   
Sbjct: 193 KVLDQLLLDNCMPTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGM 252

Query: 616 LRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGFCHELMAVSGHPAHM 675
            + G +  A  L+  + + G KP + +Y +LL                            
Sbjct: 253 CKEGMVERAAELITSLTSKGCKPDVISYNILL--------------------------RA 286

Query: 676 FLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRESKRGLVDAVVDFLHKSGLKEEAGSVWEV 735
           FL          Q   D     +  M S   E  +     ++  L + G  +EA SV +V
Sbjct: 287 FL---------NQGKWDEGEKLVAEMFSRGCEPNKVTYSILISSLCRFGRIDEAISVLKV 337

Query: 736 AAQKNVYPDA 745
             +K + PD 
Sbjct: 338 MIEKELTPDT 347


>gi|224145829|ref|XP_002325779.1| predicted protein [Populus trichocarpa]
 gi|222862654|gb|EEF00161.1| predicted protein [Populus trichocarpa]
          Length = 586

 Score =  160 bits (404), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 93/303 (30%), Positives = 156/303 (51%), Gaps = 11/303 (3%)

Query: 362 TYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQM 421
           T+TT++  L +A +F    +L D MV  GCQP+V TY  +I+   +      A  + K+M
Sbjct: 163 TFTTLINGLCKAGEFAQALELFDDMVARGCQPDVYTYTTIINGLCKMGETAAAAGLIKKM 222

Query: 422 QVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHL 481
             VGC+PD VTY TLID   K   ++ A+D++  M+A G+SP   +Y+ +I  L      
Sbjct: 223 GEVGCQPDVVTYSTLIDSLCKDRLVNEALDIFSYMKAKGISPTVVSYTSLIQGLCSFSRW 282

Query: 482 QAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIV 541
           + A  +  EM +   +P++VT++++I +  K  N   A  + + M   G EP+ +TY+ +
Sbjct: 283 KEASAMLNEMTSLNIMPDIVTFSLLIDIFCKEGNVLEAQGVLKTMTEMGVEPNVITYNSL 342

Query: 542 MEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGL 601
           M        + EA  +F  M  +   PD   Y +L++ +     + +A + +  M+  GL
Sbjct: 343 MHGYSLQMEVVEARKLFDVMITRGCKPDVFSYSILINGYCMVKRIDEAKQLFNEMIHQGL 402

Query: 602 RPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGF 661
            PN  +  +L+ AF ++G+L +A  L + M   G  P L TY++LL            GF
Sbjct: 403 TPNTVSYTTLIHAFCQLGKLREARELFKDMHTNGYLPDLCTYSVLLE-----------GF 451

Query: 662 CHE 664
           C +
Sbjct: 452 CKQ 454



 Score =  157 bits (398), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 103/319 (32%), Positives = 162/319 (50%), Gaps = 10/319 (3%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           G + D +TYTT++  L +  +  A   L+ +M   GCQP+VVTY+ LI S  +   +NEA
Sbjct: 191 GCQPDVYTYTTIINGLCKMGETAAAAGLIKKMGEVGCQPDVVTYSTLIDSLCKDRLVNEA 250

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
           LD+F  M+  G  P  V+Y +LI           A  M  +M +  + PD  T+S++I+ 
Sbjct: 251 LDIFSYMKAKGISPTVVSYTSLIQGLCSFSRWKEASAMLNEMTSLNIMPDIVTFSLLIDI 310

Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPD 534
             K G++  A  +   M   G  PN++TYN ++   +       A KL+  M   G +PD
Sbjct: 311 FCKEGNVLEAQGVLKTMTEMGVEPNVITYNSLMHGYSLQMEVVEARKLFDVMITRGCKPD 370

Query: 535 KVTYSIVMEVLGHCGY--LDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEW 592
             +YSI++   G+C    +DEA+ +F EM  +   P+   Y  L+  + + G +R+A E 
Sbjct: 371 VFSYSILIN--GYCMVKRIDEAKQLFNEMIHQGLTPNTVSYTTLIHAFCQLGKLREAREL 428

Query: 593 YEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL-SCC- 650
           ++ M   G  P++ T + LL  F + G L  A+ L + M    LKP+L  YT+L+ S C 
Sbjct: 429 FKDMHTNGYLPDLCTYSVLLEGFCKQGYLGKAFRLFRAMQGTYLKPNLVMYTILIDSMCK 488

Query: 651 ----TEARSPYDMGFCHEL 665
                 AR  +   F H L
Sbjct: 489 SGNLNHARKLFSELFVHGL 507



 Score =  154 bits (390), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 96/304 (31%), Positives = 155/304 (50%), Gaps = 9/304 (2%)

Query: 354 AGFKHDEH--------TYTTMVGILGRARQF-GAINKLLDQMVRDGCQPNVVTYNRLIHS 404
           A F H  H         +  ++  + R RQ+  A+  L  QM   G  PN  T N LI+ 
Sbjct: 76  ASFNHMLHRKPLPCIIQFNKLLSAIVRMRQYYDAVISLSKQMELAGLSPNTCTLNILINC 135

Query: 405 YGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPD 464
           +    +++    V  ++  +G +P  +T+ TLI+   KAG    A++++  M A G  PD
Sbjct: 136 FCLMQHVDLGFSVLAKVIKLGLQPTIITFTTLINGLCKAGEFAQALELFDDMVARGCQPD 195

Query: 465 TFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYR 524
            +TY+ IIN L K G   AA  L  +M   GC P++VTY+ +I    K R    AL ++ 
Sbjct: 196 VYTYTTIINGLCKMGETAAAAGLIKKMGEVGCQPDVVTYSTLIDSLCKDRLVNEALDIFS 255

Query: 525 DMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAG 584
            M+  G  P  V+Y+ +++ L       EA A+  EM   N +PD   + LL+D++ K G
Sbjct: 256 YMKAKGISPTVVSYTSLIQGLCSFSRWKEASAMLNEMTSLNIMPDIVTFSLLIDIFCKEG 315

Query: 585 NVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYT 644
           NV +A    + M + G+ PNV T NSL+  +    ++ +A  L   M+  G KP + +Y+
Sbjct: 316 NVLEAQGVLKTMTEMGVEPNVITYNSLMHGYSLQMEVVEARKLFDVMITRGCKPDVFSYS 375

Query: 645 LLLS 648
           +L++
Sbjct: 376 ILIN 379



 Score =  140 bits (353), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 80/278 (28%), Positives = 142/278 (51%)

Query: 359 DEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVF 418
           D  T++ ++ I  +         +L  M   G +PNV+TYN L+H Y     + EA  +F
Sbjct: 300 DIVTFSLLIDIFCKEGNVLEAQGVLKTMTEMGVEPNVITYNSLMHGYSLQMEVVEARKLF 359

Query: 419 KQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKA 478
             M   GC+PD  +Y  LI+ +     +D A  ++ +M   GL+P+T +Y+ +I+   + 
Sbjct: 360 DVMITRGCKPDVFSYSILINGYCMVKRIDEAKQLFNEMIHQGLTPNTVSYTTLIHAFCQL 419

Query: 479 GHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTY 538
           G L+ A +LF +M   G +P+L TY++++    K      A +L+R MQ    +P+ V Y
Sbjct: 420 GKLREARELFKDMHTNGYLPDLCTYSVLLEGFCKQGYLGKAFRLFRAMQGTYLKPNLVMY 479

Query: 539 SIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQ 598
           +I+++ +   G L+ A  +F+E+      PD  +Y  +++   K G + +A E +  M +
Sbjct: 480 TILIDSMCKSGNLNHARKLFSELFVHGLQPDVQIYTTIINGLCKEGLLDEALEAFRKMEE 539

Query: 599 AGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGL 636
            G  PN  + N ++  FL+    S A  L+  M + G 
Sbjct: 540 DGCPPNEFSYNVIIRGFLQHKDESRAVQLIGEMRDKGF 577



 Score =  130 bits (327), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 75/266 (28%), Positives = 136/266 (51%)

Query: 382 LLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHA 441
           +L ++++ G QP ++T+  LI+   +A    +AL++F  M   GC+PD  TY T+I+   
Sbjct: 148 VLAKVIKLGLQPTIITFTTLINGLCKAGEFAQALELFDDMVARGCQPDVYTYTTIINGLC 207

Query: 442 KAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLV 501
           K G    A  + KKM   G  PD  TYS +I+ L K   +  A  +F  M  +G  P +V
Sbjct: 208 KMGETAAAAGLIKKMGEVGCQPDVVTYSTLIDSLCKDRLVNEALDIFSYMKAKGISPTVV 267

Query: 502 TYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEM 561
           +Y  +I        ++ A  +  +M +    PD VT+S+++++    G + EA+ V   M
Sbjct: 268 SYTSLIQGLCSFSRWKEASAMLNEMTSLNIMPDIVTFSLLIDIFCKEGNVLEAQGVLKTM 327

Query: 562 RRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQL 621
                 P+   Y  L+  +     V +A + ++ M+  G +P+V + + L++ +  V ++
Sbjct: 328 TEMGVEPNVITYNSLMHGYSLQMEVVEARKLFDVMITRGCKPDVFSYSILINGYCMVKRI 387

Query: 622 SDAYHLLQGMLNLGLKPSLQTYTLLL 647
            +A  L   M++ GL P+  +YT L+
Sbjct: 388 DEAKQLFNEMIHQGLTPNTVSYTTLI 413



 Score = 98.6 bits (244), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 59/192 (30%), Positives = 100/192 (52%), Gaps = 1/192 (0%)

Query: 346 FFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSY 405
            FN +  Q G   +  +YTT++    +  +     +L   M  +G  P++ TY+ L+  +
Sbjct: 393 LFNEMIHQ-GLTPNTVSYTTLIHAFCQLGKLREARELFKDMHTNGYLPDLCTYSVLLEGF 451

Query: 406 GRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDT 465
            +  YL +A  +F+ MQ    +P+ V Y  LID   K+G L+ A  ++ ++   GL PD 
Sbjct: 452 CKQGYLGKAFRLFRAMQGTYLKPNLVMYTILIDSMCKSGNLNHARKLFSELFVHGLQPDV 511

Query: 466 FTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRD 525
             Y+ IIN L K G L  A + F +M   GC PN  +YN++I    + ++   A++L  +
Sbjct: 512 QIYTTIINGLCKEGLLDEALEAFRKMEEDGCPPNEFSYNVIIRGFLQHKDESRAVQLIGE 571

Query: 526 MQNAGFEPDKVT 537
           M++ GF  D+ T
Sbjct: 572 MRDKGFVADEGT 583



 Score = 69.7 bits (169), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 41/167 (24%), Positives = 89/167 (53%), Gaps = 2/167 (1%)

Query: 488 FCEMVNQGCIPNLVTYNIMIALQAKARNYQSA-LKLYRDMQNAGFEPDKVTYSIVMEVLG 546
           F  M+++  +P ++ +N +++   + R Y  A + L + M+ AG  P+  T +I++    
Sbjct: 78  FNHMLHRKPLPCIIQFNKLLSAIVRMRQYYDAVISLSKQMELAGLSPNTCTLNILINCFC 137

Query: 547 HCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVP 606
              ++D   +V A++ +    P    +  L++   KAG   +A E ++ M+  G +P+V 
Sbjct: 138 LMQHVDLGFSVLAKVIKLGLQPTIITFTTLINGLCKAGEFAQALELFDDMVARGCQPDVY 197

Query: 607 TCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTY-TLLLSCCTE 652
           T  ++++   ++G+ + A  L++ M  +G +P + TY TL+ S C +
Sbjct: 198 TYTTIINGLCKMGETAAAAGLIKKMGEVGCQPDVVTYSTLIDSLCKD 244


>gi|168033824|ref|XP_001769414.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162679334|gb|EDQ65783.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 410

 Score =  160 bits (404), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 95/332 (28%), Positives = 166/332 (50%), Gaps = 2/332 (0%)

Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLI 402
           AL  F +L+    ++  EH   T++ ILGR  + G   ++ + M + G  P+V  Y  L+
Sbjct: 13  ALQVFRFLQEHLEYELKEHNCVTIISILGREGKLGLAREIFEGMSKAGVAPSVHAYTALL 72

Query: 403 HSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGF-LDVAMDMYKKMQAAGL 461
             Y +   L EA  +F+ M+  GC P+ +TY TLI+   K  + L   + ++++M+ AG+
Sbjct: 73  SGYAKQGLLKEAWALFEAMKEKGCSPNVLTYNTLINACTKRAYRLPDLVGLFEEMKQAGV 132

Query: 462 SPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALK 521
            P+  TY+ ++N          A Q+  EM    C+PN+++Y  MI    ++     A++
Sbjct: 133 QPNDITYNCMVNACVCLSLFDTASQILKEMKAVNCLPNVISYTTMINSLGRSGRLDEAVE 192

Query: 522 LYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWG 581
           L+ +M+  G  P+  TY+ +++     G  ++A  +F  M  +  +PD   Y  ++D+ G
Sbjct: 193 LFEEMKELGRSPNSWTYNSLLKAYAREGRYEKAMCLFVGMEDEGCIPDLYTYNTVIDMCG 252

Query: 582 KAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQ 641
           + G   +A   +  M + G  P+  T N++L A+ +  +   A  LL+ M   G  P L 
Sbjct: 253 RGGLFAEAEGVFLEMQRKGCTPDRVTYNTMLDAYSKWSRRGRARDLLKTMKRAGCTPDLW 312

Query: 642 TYTLLLSCCTEARSPYD-MGFCHELMAVSGHP 672
           TY +LL    +A S  + M   HEL A    P
Sbjct: 313 TYNILLDAAGKAGSASEAMQIFHELKAAGHSP 344



 Score =  153 bits (387), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 83/298 (27%), Positives = 161/298 (54%), Gaps = 1/298 (0%)

Query: 352 RQAGFKHDEHTYTTMV-GILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANY 410
           ++ G   +  TY T++     RA +   +  L ++M + G QPN +TYN ++++    + 
Sbjct: 92  KEKGCSPNVLTYNTLINACTKRAYRLPDLVGLFEEMKQAGVQPNDITYNCMVNACVCLSL 151

Query: 411 LNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSV 470
            + A  + K+M+ V C P+ ++Y T+I+   ++G LD A++++++M+  G SP+++TY+ 
Sbjct: 152 FDTASQILKEMKAVNCLPNVISYTTMINSLGRSGRLDEAVELFEEMKELGRSPNSWTYNS 211

Query: 471 IINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAG 530
           ++    + G  + A  LF  M ++GCIP+L TYN +I +  +   +  A  ++ +MQ  G
Sbjct: 212 LLKAYAREGRYEKAMCLFVGMEDEGCIPDLYTYNTVIDMCGRGGLFAEAEGVFLEMQRKG 271

Query: 531 FEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAW 590
             PD+VTY+ +++          A  +   M+R    PD   Y +L+D  GKAG+  +A 
Sbjct: 272 CTPDRVTYNTMLDAYSKWSRRGRARDLLKTMKRAGCTPDLWTYNILLDAAGKAGSASEAM 331

Query: 591 EWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
           + +  +  AG  PN+ + ++L++ + R+G   +A      M   G  P+   Y  L++
Sbjct: 332 QIFHELKAAGHSPNLVSFSALINMYGRLGYFEEAERAWVEMRATGCVPNATAYCGLMN 389



 Score =  152 bits (385), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 83/272 (30%), Positives = 147/272 (54%), Gaps = 1/272 (0%)

Query: 344 LGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIH 403
           +G F  ++ QAG + ++ TY  MV        F   +++L +M    C PNV++Y  +I+
Sbjct: 121 VGLFEEMK-QAGVQPNDITYNCMVNACVCLSLFDTASQILKEMKAVNCLPNVISYTTMIN 179

Query: 404 SYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSP 463
           S GR+  L+EA+++F++M+ +G  P+  TY +L+  +A+ G  + AM ++  M+  G  P
Sbjct: 180 SLGRSGRLDEAVELFEEMKELGRSPNSWTYNSLLKAYAREGRYEKAMCLFVGMEDEGCIP 239

Query: 464 DTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLY 523
           D +TY+ +I+  G+ G    A  +F EM  +GC P+ VTYN M+   +K      A  L 
Sbjct: 240 DLYTYNTVIDMCGRGGLFAEAEGVFLEMQRKGCTPDRVTYNTMLDAYSKWSRRGRARDLL 299

Query: 524 RDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKA 583
           + M+ AG  PD  TY+I+++  G  G   EA  +F E++     P+   +  L++++G+ 
Sbjct: 300 KTMKRAGCTPDLWTYNILLDAAGKAGSASEAMQIFHELKAAGHSPNLVSFSALINMYGRL 359

Query: 584 GNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAF 615
           G   +A   +  M   G  PN      L++++
Sbjct: 360 GYFEEAERAWVEMRATGCVPNATAYCGLMNSY 391



 Score = 57.4 bits (137), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 28/97 (28%), Positives = 50/97 (51%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           ++AG   D  TY  ++   G+A       ++  ++   G  PN+V+++ LI+ YGR  Y 
Sbjct: 303 KRAGCTPDLWTYNILLDAAGKAGSASEAMQIFHELKAAGHSPNLVSFSALINMYGRLGYF 362

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDV 448
            EA   + +M+  GC P+   YC L++ ++  G   V
Sbjct: 363 EEAERAWVEMRATGCVPNATAYCGLMNSYSHHGMYKV 399


>gi|414588908|tpg|DAA39479.1| TPA: chloroplast RNA splicing4 [Zea mays]
          Length = 1438

 Score =  160 bits (404), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 89/298 (29%), Positives = 163/298 (54%), Gaps = 2/298 (0%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           R AG       +  M+G+  R+ +F    +LLD M   G  P++V++N LI++  ++  L
Sbjct: 213 RFAGEGATVQVFNAMMGVYARSGRFDDARQLLDTMHDRGIDPDLVSFNTLINARSKSGCL 272

Query: 412 NE--ALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYS 469
               ALD+  +++  G  PD +TY TLI   +++  L+ A+ +++ M A+   PD +TY+
Sbjct: 273 AAGVALDLLFEVRQSGLRPDVITYNTLISACSQSSNLEDAVTVFEDMIASECRPDLWTYN 332

Query: 470 VIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNA 529
            +++  G+ G  + A +LF E+V +G +P+ +TYN ++   AK  N          +  A
Sbjct: 333 AMVSVHGRCGKAEEAERLFRELVEKGFMPDAITYNSLLYAFAKEGNVDKVEHTCEQLVKA 392

Query: 530 GFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKA 589
           GF+ +++TY+ ++ + G  G LD A  ++ EMR     PD   Y +++D  GK   + +A
Sbjct: 393 GFKKNEITYNTMIHMYGKMGRLDLAVGLYDEMRAMGCTPDAVTYTVMIDSLGKMNRIAEA 452

Query: 590 WEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
            +  E M  AGL+P +   ++L+ A+ + G+ +DA +    M+  G+KP    Y ++L
Sbjct: 453 GKVLEDMTDAGLKPTLIAFSALICAYAKGGRRADAENTFDCMIASGVKPDRLAYLVML 510



 Score =  152 bits (384), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 87/330 (26%), Positives = 170/330 (51%), Gaps = 6/330 (1%)

Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLI 402
           AL  F WL R +           ++G+LGRARQ     ++  +   +G    V  +N ++
Sbjct: 173 ALDAFEWLARSSA--PASRAVAVVLGVLGRARQDSIAEEVFLRFAGEG--ATVQVFNAMM 228

Query: 403 HSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFL--DVAMDMYKKMQAAG 460
             Y R+   ++A  +   M   G +PD V++ TLI+  +K+G L   VA+D+  +++ +G
Sbjct: 229 GVYARSGRFDDARQLLDTMHDRGIDPDLVSFNTLINARSKSGCLAAGVALDLLFEVRQSG 288

Query: 461 LSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSAL 520
           L PD  TY+ +I+   ++ +L+ A  +F +M+   C P+L TYN M+++  +    + A 
Sbjct: 289 LRPDVITYNTLISACSQSSNLEDAVTVFEDMIASECRPDLWTYNAMVSVHGRCGKAEEAE 348

Query: 521 KLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLW 580
           +L+R++   GF PD +TY+ ++      G +D+ E    ++ +  +  +E  Y  ++ ++
Sbjct: 349 RLFRELVEKGFMPDAITYNSLLYAFAKEGNVDKVEHTCEQLVKAGFKKNEITYNTMIHMY 408

Query: 581 GKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSL 640
           GK G +  A   Y+ M   G  P+  T   ++ +  ++ ++++A  +L+ M + GLKP+L
Sbjct: 409 GKMGRLDLAVGLYDEMRAMGCTPDAVTYTVMIDSLGKMNRIAEAGKVLEDMTDAGLKPTL 468

Query: 641 QTYTLLLSCCTEARSPYDMGFCHELMAVSG 670
             ++ L+    +     D     + M  SG
Sbjct: 469 IAFSALICAYAKGGRRADAENTFDCMIASG 498



 Score =  138 bits (348), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 86/318 (27%), Positives = 147/318 (46%), Gaps = 13/318 (4%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           RQ+G + D  TY T++    ++        + + M+   C+P++ TYN ++  +GR    
Sbjct: 285 RQSGLRPDVITYNTLISACSQSSNLEDAVTVFEDMIASECRPDLWTYNAMVSVHGRCGKA 344

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
            EA  +F+++   G  PD +TY +L+   AK G +D      +++  AG   +  TY+ +
Sbjct: 345 EEAERLFRELVEKGFMPDAITYNSLLYAFAKEGNVDKVEHTCEQLVKAGFKKNEITYNTM 404

Query: 472 INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF 531
           I+  GK G L  A  L+ EM   GC P+ VTY +MI    K      A K+  DM +AG 
Sbjct: 405 IHMYGKMGRLDLAVGLYDEMRAMGCTPDAVTYTVMIDSLGKMNRIAEAGKVLEDMTDAGL 464

Query: 532 EPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWE 591
           +P  + +S ++      G   +AE  F  M      PD   Y +++D++ ++G+  K   
Sbjct: 465 KPTLIAFSALICAYAKGGRRADAENTFDCMIASGVKPDRLAYLVMLDVFARSGDTEKMLC 524

Query: 592 WYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGM-----LNLGLKPSL------ 640
            Y  M+    RP+      LL A  +  +  +   ++Q M     +NLG+  ++      
Sbjct: 525 LYRKMMNDNYRPDDDMYQVLLVALAKEDKCEEIEEVIQDMELLCRMNLGIISTMLIKARC 584

Query: 641 --QTYTLLLSCCTEARSP 656
             Q   LL   C +   P
Sbjct: 585 VSQGAKLLKKACLQGYKP 602



 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 75/271 (27%), Positives = 132/271 (48%)

Query: 377 GAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTL 436
           G    LL ++ + G +P+V+TYN LI +  +++ L +A+ VF+ M    C PD  TY  +
Sbjct: 275 GVALDLLFEVRQSGLRPDVITYNTLISACSQSSNLEDAVTVFEDMIASECRPDLWTYNAM 334

Query: 437 IDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGC 496
           + +H + G  + A  +++++   G  PD  TY+ ++    K G++        ++V  G 
Sbjct: 335 VSVHGRCGKAEEAERLFRELVEKGFMPDAITYNSLLYAFAKEGNVDKVEHTCEQLVKAGF 394

Query: 497 IPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEA 556
             N +TYN MI +  K      A+ LY +M+  G  PD VTY+++++ LG    + EA  
Sbjct: 395 KKNEITYNTMIHMYGKMGRLDLAVGLYDEMRAMGCTPDAVTYTVMIDSLGKMNRIAEAGK 454

Query: 557 VFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFL 616
           V  +M      P    +  L+  + K G    A   ++ M+ +G++P+      +L  F 
Sbjct: 455 VLEDMTDAGLKPTLIAFSALICAYAKGGRRADAENTFDCMIASGVKPDRLAYLVMLDVFA 514

Query: 617 RVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
           R G       L + M+N   +P    Y +LL
Sbjct: 515 RSGDTEKMLCLYRKMMNDNYRPDDDMYQVLL 545



 Score =  120 bits (302), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 88/416 (21%), Positives = 184/416 (44%), Gaps = 5/416 (1%)

Query: 356  FKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEAL 415
            FK  + T   ++    +A     + K+ + M   G  PN+  Y  +I      N   +  
Sbjct: 846  FKISKSTVLLLLDAFAKAGDVFEVMKIYNGMKAAGYLPNMHLYRSMISLLCHHNRFRDVE 905

Query: 416  DVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCL 475
             +  +M+  G +PD      L++++  AG  D    +Y+ +  AGL PD  TY+ +I   
Sbjct: 906  LMIAEMEGAGFKPDLAILNALLNMYTAAGNFDRTTQVYRSILEAGLEPDEDTYNTLIVMY 965

Query: 476  GKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDK 535
             ++   +    L  EM  +G  P L +Y  ++A  AKA   + A +++ +M++  ++ ++
Sbjct: 966  CRSFRPEEGFTLLNEMGKRGLTPKLQSYKSLLAASAKAELREQADQIFEEMRSKSYQLNR 1025

Query: 536  VTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEA 595
              Y ++M++  + G   +AE + A M+     P      +L+  +G AG  R+A      
Sbjct: 1026 SIYHMMMKIYRNAGNHSKAENLLAVMKEDGIEPTIATMHILMTSYGTAGQPREAENVLNN 1085

Query: 596  MLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARS 655
            +  + L  +    +++  A+L+ G  +     L  M   G++P  Q +T  +   +    
Sbjct: 1086 LKSSSLEVSTLPYSTVFDAYLKNGDYNHGTTKLLEMKRDGVEPDHQVWTCFIRAASLCEQ 1145

Query: 656  PYDMGFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRESKRGLVDA 715
              D     + +   G    + LL+  +P     ++   + ++LE + + +  +    V+A
Sbjct: 1146 TADAILLLKSLQDCGFDLPIRLLTERTP-----SLLSEIANYLEELEALEDSAALNFVNA 1200

Query: 716  VVDFLHKSGLKEEAGSVWEVAAQKNVYPDAVKEKGMSYWLINLHVMSDGTAVIALS 771
            V D L     +  A  ++++A ++++Y D V       W  +   +S G A++ L+
Sbjct: 1201 VEDLLWAFECRATASRIFQLAVERSIYRDNVFRVAQKDWGADFRKLSAGAALVGLT 1256



 Score = 98.6 bits (244), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 85/388 (21%), Positives = 155/388 (39%), Gaps = 74/388 (19%)

Query: 338  QDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVT 397
            + H   L     +     F  D  +  +++ +  +     A  +   +++      N   
Sbjct: 618  EKHEEGLSLLECICEHVSFSQDLISECSIMLLCRKQTSISAYEQYSQRLMLKYPDQNCNL 677

Query: 398  YNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVA-------- 449
            Y  LI     A + +EA  VF  MQ +G E  +  Y ++I  + K GF + A        
Sbjct: 678  YEYLITCLIEAEFFSEACQVFCDMQFIGIEASKSIYESIISTYCKLGFPETAHRLMDDAL 737

Query: 450  ---------------MDMYKKM--------------QAAGLSPDTFTYSVIINCLGKAGH 480
                           ++ Y K+              QA+G+  D   ++ +I+   ++G 
Sbjct: 738  QSGIPLNILSCRVIIIEAYGKIKLWQQAEILVKGLRQASGI--DRRIWNALIHAYAESGL 795

Query: 481  LQAAHQLFCEMVNQGCIPNLVTYNIMI-----------------ALQ------------- 510
             + A  +F  M+  G +P + + N M+                  LQ             
Sbjct: 796  YEKARAVFDNMIKTGPLPTVDSVNGMMRALIVDGRLDELYVVVEELQDMNFKISKSTVLL 855

Query: 511  -----AKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKN 565
                 AKA +    +K+Y  M+ AG+ P+   Y  ++ +L H     + E + AEM    
Sbjct: 856  LLDAFAKAGDVFEVMKIYNGMKAAGYLPNMHLYRSMISLLCHHNRFRDVELMIAEMEGAG 915

Query: 566  WVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAY 625
            + PD  +   L++++  AGN  +  + Y ++L+AGL P+  T N+L+  + R  +  + +
Sbjct: 916  FKPDLAILNALLNMYTAAGNFDRTTQVYRSILEAGLEPDEDTYNTLIVMYCRSFRPEEGF 975

Query: 626  HLLQGMLNLGLKPSLQTYTLLLSCCTEA 653
             LL  M   GL P LQ+Y  LL+   +A
Sbjct: 976  TLLNEMGKRGLTPKLQSYKSLLAASAKA 1003



 Score = 77.4 bits (189), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 76/379 (20%), Positives = 167/379 (44%), Gaps = 5/379 (1%)

Query: 369 ILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQM-QVVGCE 427
           +L +AR      KLL +    G +P++ +   ++++Y       E L + + + + V   
Sbjct: 578 MLIKARCVSQGAKLLKKACLQGYKPDIKSLRSIMNAYVMTEKHEEGLSLLECICEHVSFS 637

Query: 428 PDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQL 487
            D ++ C+++ +  K   +       +++       +   Y  +I CL +A     A Q+
Sbjct: 638 QDLISECSIMLLCRKQTSISAYEQYSQRLMLKYPDQNCNLYEYLITCLIEAEFFSEACQV 697

Query: 488 FCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYS-IVMEVLG 546
           FC+M   G   +   Y  +I+   K    ++A +L  D   +G   + ++   I++E  G
Sbjct: 698 FCDMQFIGIEASKSIYESIISTYCKLGFPETAHRLMDDALQSGIPLNILSCRVIIIEAYG 757

Query: 547 HCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVP 606
                 +AE +   +R+ + + D  ++  L+  + ++G   KA   ++ M++ G  P V 
Sbjct: 758 KIKLWQQAEILVKGLRQASGI-DRRIWNALIHAYAESGLYEKARAVFDNMIKTGPLPTVD 816

Query: 607 TCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGFCHELM 666
           + N ++ A +  G+L + Y +++ + ++  K S  T  LLL    +A   +++   +  M
Sbjct: 817 SVNGMMRALIVDGRLDELYVVVEELQDMNFKISKSTVLLLLDAFAKAGDVFEVMKIYNGM 876

Query: 667 AVSGHPAHMFLL-SMPSPGPDGQNVRDHVGSFLEMMHSEDRESKRGLVDAVVDFLHKSGL 725
             +G+  +M L  SM S        RD V   +  M     +    +++A+++    +G 
Sbjct: 877 KAAGYLPNMHLYRSMISLLCHHNRFRD-VELMIAEMEGAGFKPDLAILNALLNMYTAAGN 935

Query: 726 KEEAGSVWEVAAQKNVYPD 744
            +    V+    +  + PD
Sbjct: 936 FDRTTQVYRSILEAGLEPD 954



 Score = 48.5 bits (114), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 55/233 (23%), Positives = 97/233 (41%), Gaps = 14/233 (6%)

Query: 526 MQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGN 585
           +  A   PD+V +  V+  +G   +    +A   E   ++  P      +++ + G+A  
Sbjct: 148 LDGARASPDEVAF--VVRAVGESSWRRALDAF--EWLARSSAPASRAVAVVLGVLGRARQ 203

Query: 586 VRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTL 645
              A E +  +  AG    V   N+++  + R G+  DA  LL  M + G+ P L ++  
Sbjct: 204 DSIAEEVF--LRFAGEGATVQVFNAMMGVYARSGRFDDARQLLDTMHDRGIDPDLVSFNT 261

Query: 646 LL-----SCCTEARSPYDMGFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEM 700
           L+     S C  A    D+ F  E+      P  +   ++ S      N+ D V  F +M
Sbjct: 262 LINARSKSGCLAAGVALDLLF--EVRQSGLRPDVITYNTLISACSQSSNLEDAVTVFEDM 319

Query: 701 MHSEDRESKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAVKEKGMSY 753
           + SE R       +A+V    + G  EEA  ++    +K   PDA+    + Y
Sbjct: 320 IASECR-PDLWTYNAMVSVHGRCGKAEEAERLFRELVEKGFMPDAITYNSLLY 371


>gi|242073384|ref|XP_002446628.1| hypothetical protein SORBIDRAFT_06g019140 [Sorghum bicolor]
 gi|241937811|gb|EES10956.1| hypothetical protein SORBIDRAFT_06g019140 [Sorghum bicolor]
          Length = 614

 Score =  160 bits (404), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 88/302 (29%), Positives = 156/302 (51%), Gaps = 2/302 (0%)

Query: 346 FFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSY 405
           F   LRR  G      T+ T++  + +A    + N L   M + G  P+V TY   +   
Sbjct: 267 FDEMLRR--GVPPTVVTFNTLMSGMCKASDLNSANALRGLMAKAGVAPDVYTYGAFMQGL 324

Query: 406 GRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDT 465
            +A  + +A+++F++M+  G  P+ V + TLID H K G +   ++++++M   G+  D 
Sbjct: 325 CKAGRIQDAVEMFEEMRERGVNPNTVVFTTLIDAHCKEGNVAAGLELHREMATRGIKTDL 384

Query: 466 FTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRD 525
             Y+ + N L +   L+AA+ +  EM N G  P+ VTY  +I    K      A+++ ++
Sbjct: 385 VAYNALANGLCRVRDLKAANDIVEEMRNNGLKPDKVTYTTLIDGFCKEGELDMAMEMKQE 444

Query: 526 MQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGN 585
           M + G   D+VTY+ ++  L   G   ++E +  EM      PD   Y +++D + K  +
Sbjct: 445 MSDEGVALDEVTYTTLISGLSKSGRSVDSERILCEMMEAGLEPDNTTYTMVIDAFCKNSD 504

Query: 586 VRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTL 645
           V+  ++  + M   G +P V T N +++ F  +GQ+ +A  LL  MLN+G+ P   TY +
Sbjct: 505 VKTGFKLLKEMQNKGRKPGVVTYNVVMNGFCILGQMKNADMLLNAMLNIGVCPDDITYNI 564

Query: 646 LL 647
           LL
Sbjct: 565 LL 566



 Score =  139 bits (351), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 89/291 (30%), Positives = 151/291 (51%), Gaps = 8/291 (2%)

Query: 336 QLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNV 395
           ++QD   A+  F  +R + G   +   +TT++    +     A  +L  +M   G + ++
Sbjct: 329 RIQD---AVEMFEEMRER-GVNPNTVVFTTLIDAHCKEGNVAAGLELHREMATRGIKTDL 384

Query: 396 VTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKK 455
           V YN L +   R   L  A D+ ++M+  G +PD+VTY TLID   K G LD+AM+M ++
Sbjct: 385 VAYNALANGLCRVRDLKAANDIVEEMRNNGLKPDKVTYTTLIDGFCKEGELDMAMEMKQE 444

Query: 456 MQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARN 515
           M   G++ D  TY+ +I+ L K+G    + ++ CEM+  G  P+  TY ++I    K  +
Sbjct: 445 MSDEGVALDEVTYTTLISGLSKSGRSVDSERILCEMMEAGLEPDNTTYTMVIDAFCKNSD 504

Query: 516 YQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGL 575
            ++  KL ++MQN G +P  VTY++VM      G +  A+ +   M      PD+  Y +
Sbjct: 505 VKTGFKLLKEMQNKGRKPGVVTYNVVMNGFCILGQMKNADMLLNAMLNIGVCPDDITYNI 564

Query: 576 LVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYH 626
           L+D   K G VR A E   A    G+  +     SL++ F++  + + +YH
Sbjct: 565 LLDGHCKHGKVRDAEELKSA---KGMVSDFGLYTSLINEFVK-KKSTKSYH 611



 Score =  132 bits (332), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 81/263 (30%), Positives = 129/263 (49%)

Query: 385 QMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAG 444
           Q++  G  P    +N L+    R+  L  A ++F +M   G  P  VT+ TL+    KA 
Sbjct: 234 QLLDAGVPPEAKQFNMLMRDMIRSGKLASARNMFDEMLRRGVPPTVVTFNTLMSGMCKAS 293

Query: 445 FLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYN 504
            L+ A  +   M  AG++PD +TY   +  L KAG +Q A ++F EM  +G  PN V + 
Sbjct: 294 DLNSANALRGLMAKAGVAPDVYTYGAFMQGLCKAGRIQDAVEMFEEMRERGVNPNTVVFT 353

Query: 505 IMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRK 564
            +I    K  N  + L+L+R+M   G + D V Y+ +   L     L  A  +  EMR  
Sbjct: 354 TLIDAHCKEGNVAAGLELHREMATRGIKTDLVAYNALANGLCRVRDLKAANDIVEEMRNN 413

Query: 565 NWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDA 624
              PD+  Y  L+D + K G +  A E  + M   G+  +  T  +L+S   + G+  D+
Sbjct: 414 GLKPDKVTYTTLIDGFCKEGELDMAMEMKQEMSDEGVALDEVTYTTLISGLSKSGRSVDS 473

Query: 625 YHLLQGMLNLGLKPSLQTYTLLL 647
             +L  M+  GL+P   TYT+++
Sbjct: 474 ERILCEMMEAGLEPDNTTYTMVI 496



 Score =  111 bits (278), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 66/212 (31%), Positives = 107/212 (50%), Gaps = 11/212 (5%)

Query: 453 YKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAK 512
           Y ++  AG+ P+   +++++  + ++G L +A  +F EM+ +G  P +VT+N +++   K
Sbjct: 232 YLQLLDAGVPPEAKQFNMLMRDMIRSGKLASARNMFDEMLRRGVPPTVVTFNTLMSGMCK 291

Query: 513 ARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPV 572
           A +  SA  L   M  AG  PD  TY   M+ L   G + +A  +F EMR +   P+  V
Sbjct: 292 ASDLNSANALRGLMAKAGVAPDVYTYGAFMQGLCKAGRIQDAVEMFEEMRERGVNPNTVV 351

Query: 573 YGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGML 632
           +  L+D   K GNV    E +  M   G++ ++   N+L +   RV  L  A  +++ M 
Sbjct: 352 FTTLIDAHCKEGNVAAGLELHREMATRGIKTDLVAYNALANGLCRVRDLKAANDIVEEMR 411

Query: 633 NLGLKPSLQTYTLLLSCCTEARSPYDMGFCHE 664
           N GLKP   TYT L+            GFC E
Sbjct: 412 NNGLKPDKVTYTTLID-----------GFCKE 432



 Score = 47.0 bits (110), Expect = 0.042,   Method: Compositional matrix adjust.
 Identities = 27/93 (29%), Positives = 47/93 (50%)

Query: 578 DLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLK 637
           DL  +  +V +A+ +Y  +L AG+ P     N L+   +R G+L+ A ++   ML  G+ 
Sbjct: 217 DLMNRLPSVPEAYAFYLQLLDAGVPPEAKQFNMLMRDMIRSGKLASARNMFDEMLRRGVP 276

Query: 638 PSLQTYTLLLSCCTEARSPYDMGFCHELMAVSG 670
           P++ T+  L+S   +A           LMA +G
Sbjct: 277 PTVVTFNTLMSGMCKASDLNSANALRGLMAKAG 309


>gi|356532365|ref|XP_003534744.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16390,
           chloroplastic-like [Glycine max]
          Length = 705

 Score =  159 bits (403), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 124/515 (24%), Positives = 238/515 (46%), Gaps = 35/515 (6%)

Query: 363 YTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQ 422
           Y   +    ++R F    KL D+M++ G +P+ +T++ LI+S       ++A++ FK+M 
Sbjct: 167 YNATLKAFRKSRDFEGAEKLFDEMLQRGVKPDNITFSTLINSARMCALPDKAVEWFKKMP 226

Query: 423 VVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQ 482
             GCEPD +T   ++  +A+   +D+A+ +Y + +A   S D  T+S +I   G  G+  
Sbjct: 227 SFGCEPDAMTCSAMVSAYAQTNNVDMALSLYGRAKAEKWSLDASTFSTLIKMYGVLGNYV 286

Query: 483 AAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVM 542
              ++F EM   G  P +VTYN ++    +++    A  +Y++M + G  PD +TY+ ++
Sbjct: 287 ECLRIFGEMKVLGVKPTVVTYNTLLGSLFRSKKSWQAKNVYKEMISNGVSPDFITYATLL 346

Query: 543 EVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAG-L 601
            +     Y ++A +V+ EM+         +Y  L+D+    G + +A E +E M  +G  
Sbjct: 347 RIYAGAQYREDALSVYKEMKGNGMDMTVDLYNRLLDMCADVGCIEEAVEIFEDMKSSGTC 406

Query: 602 RPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYD-MG 660
           +P+  T +SL++ +   G++S+A  +L  M+  G +P++   T L+ C   A+   D + 
Sbjct: 407 QPDSLTFSSLITVYSCNGKVSEAEGMLNEMIQSGFQPTIYVLTSLVQCYGRAKQTDDVVK 466

Query: 661 FCHELMAVSGHPAHMF---LLSMPSPGPD-----------------GQNVRDHV------ 694
              +L+ +   P   F   LL++ +  P                  G  VR  V      
Sbjct: 467 IFKQLLDLGIVPDVYFCCCLLNVMTQTPKEEFGKLTDCIEKANTRLGSVVRYLVEGQEGD 526

Query: 695 GSFL----EMMHSEDRESKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAVKEKG 750
           G F     E+++S D + K+ L + ++D          A  V ++     +Y + ++ + 
Sbjct: 527 GDFRKEASELLNSIDFKVKKPLCNCLIDLCVSLNAPNRARDVLDLGLMLEIYKN-IQSRS 585

Query: 751 MSYWLINLHVMSDGTAVIALSRTLAWFRKQMLISGVGPSRIDIVTGWGRRSRVTGTSLVR 810
            + W ++L  +S G A+ AL   +    K +      P  + + TG G+  + +   L  
Sbjct: 586 ETQWSLHLKKLSVGAAITALHVWINDLSKALESWEDLPPLLGVNTGQGKH-KYSDKGLA- 643

Query: 811 QAVQELLHMFSFPFFTENGNSGCFVGCGEPLNKWL 845
              +  L   + PF      +G F+   E    WL
Sbjct: 644 SVFESHLRELNAPFHQAPDKAGWFLVTKEAAKSWL 678



 Score = 97.4 bits (241), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 55/212 (25%), Positives = 110/212 (51%), Gaps = 1/212 (0%)

Query: 359 DEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVF 418
           D  T++T++ + G    +    ++  +M   G +P VVTYN L+ S  R+    +A +V+
Sbjct: 268 DASTFSTLIKMYGVLGNYVECLRIFGEMKVLGVKPTVVTYNTLLGSLFRSKKSWQAKNVY 327

Query: 419 KQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKA 478
           K+M   G  PD +TY TL+ I+A A + + A+ +YK+M+  G+      Y+ +++     
Sbjct: 328 KEMISNGVSPDFITYATLLRIYAGAQYREDALSVYKEMKGNGMDMTVDLYNRLLDMCADV 387

Query: 479 GHLQAAHQLFCEMVNQG-CIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVT 537
           G ++ A ++F +M + G C P+ +T++ +I + +       A  +  +M  +GF+P    
Sbjct: 388 GCIEEAVEIFEDMKSSGTCQPDSLTFSSLITVYSCNGKVSEAEGMLNEMIQSGFQPTIYV 447

Query: 538 YSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPD 569
            + +++  G     D+   +F ++     VPD
Sbjct: 448 LTSLVQCYGRAKQTDDVVKIFKQLLDLGIVPD 479



 Score = 93.6 bits (231), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 54/216 (25%), Positives = 109/216 (50%), Gaps = 5/216 (2%)

Query: 323 YSMDAYQANQVLKQ---LQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAI 379
           +S+DA   + ++K    L ++   L  F  ++   G K    TY T++G L R+++    
Sbjct: 265 WSLDASTFSTLIKMYGVLGNYVECLRIFGEMK-VLGVKPTVVTYNTLLGSLFRSKKSWQA 323

Query: 380 NKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDI 439
             +  +M+ +G  P+ +TY  L+  Y  A Y  +AL V+K+M+  G +     Y  L+D+
Sbjct: 324 KNVYKEMISNGVSPDFITYATLLRIYAGAQYREDALSVYKEMKGNGMDMTVDLYNRLLDM 383

Query: 440 HAKAGFLDVAMDMYKKMQAAG-LSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIP 498
            A  G ++ A+++++ M+++G   PD+ T+S +I      G +  A  +  EM+  G  P
Sbjct: 384 CADVGCIEEAVEIFEDMKSSGTCQPDSLTFSSLITVYSCNGKVSEAEGMLNEMIQSGFQP 443

Query: 499 NLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPD 534
            +     ++    +A+     +K+++ + + G  PD
Sbjct: 444 TIYVLTSLVQCYGRAKQTDDVVKIFKQLLDLGIVPD 479



 Score = 80.5 bits (197), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 44/184 (23%), Positives = 88/184 (47%)

Query: 464 DTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLY 523
           +   Y+  +    K+   + A +LF EM+ +G  P+ +T++ +I           A++ +
Sbjct: 163 EVILYNATLKAFRKSRDFEGAEKLFDEMLQRGVKPDNITFSTLINSARMCALPDKAVEWF 222

Query: 524 RDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKA 583
           + M + G EPD +T S ++        +D A +++   + + W  D   +  L+ ++G  
Sbjct: 223 KKMPSFGCEPDAMTCSAMVSAYAQTNNVDMALSLYGRAKAEKWSLDASTFSTLIKMYGVL 282

Query: 584 GNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTY 643
           GN  +    +  M   G++P V T N+LL +  R  +   A ++ + M++ G+ P   TY
Sbjct: 283 GNYVECLRIFGEMKVLGVKPTVVTYNTLLGSLFRSKKSWQAKNVYKEMISNGVSPDFITY 342

Query: 644 TLLL 647
             LL
Sbjct: 343 ATLL 346



 Score = 75.1 bits (183), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 66/278 (23%), Positives = 116/278 (41%), Gaps = 8/278 (2%)

Query: 431 VTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCE 490
           + Y   +    K+   + A  ++ +M   G+ PD  T+S +IN          A + F +
Sbjct: 165 ILYNATLKAFRKSRDFEGAEKLFDEMLQRGVKPDNITFSTLINSARMCALPDKAVEWFKK 224

Query: 491 MVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGY 550
           M + GC P+ +T + M++  A+  N   AL LY   +   +  D  T+S ++++ G  G 
Sbjct: 225 MPSFGCEPDAMTCSAMVSAYAQTNNVDMALSLYGRAKAEKWSLDASTFSTLIKMYGVLGN 284

Query: 551 LDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEW---YEAMLQAGLRPNVPT 607
             E   +F EM+     P    Y  L+   G     +K+W+    Y+ M+  G+ P+  T
Sbjct: 285 YVECLRIFGEMKVLGVKPTVVTYNTLL---GSLFRSKKSWQAKNVYKEMISNGVSPDFIT 341

Query: 608 CNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGFCHELMA 667
             +LL  +       DA  + + M   G+  ++  Y  LL  C +     +     E M 
Sbjct: 342 YATLLRIYAGAQYREDALSVYKEMKGNGMDMTVDLYNRLLDMCADVGCIEEAVEIFEDMK 401

Query: 668 VSG--HPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHS 703
            SG   P  +   S+ +       V +  G   EM+ S
Sbjct: 402 SSGTCQPDSLTFSSLITVYSCNGKVSEAEGMLNEMIQS 439



 Score = 64.3 bits (155), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 52/248 (20%), Positives = 101/248 (40%), Gaps = 1/248 (0%)

Query: 500 LVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFA 559
           ++ YN  +    K+R+++ A KL+ +M   G +PD +T+S ++     C   D+A   F 
Sbjct: 164 VILYNATLKAFRKSRDFEGAEKLFDEMLQRGVKPDNITFSTLINSARMCALPDKAVEWFK 223

Query: 560 EMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVG 619
           +M      PD      +V  + +  NV  A   Y          +  T ++L+  +  +G
Sbjct: 224 KMPSFGCEPDAMTCSAMVSAYAQTNNVDMALSLYGRAKAEKWSLDASTFSTLIKMYGVLG 283

Query: 620 QLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGFCHELMAVSGHPAHMFLLS 679
              +   +   M  LG+KP++ TY  LL     ++  +     ++ M  +G        +
Sbjct: 284 NYVECLRIFGEMKVLGVKPTVVTYNTLLGSLFRSKKSWQAKNVYKEMISNGVSPDFITYA 343

Query: 680 MPSPGPDGQNVRDHVGSFLEMMHSEDRESKRGLVDAVVDFLHKSGLKEEAGSVWE-VAAQ 738
                  G   R+   S  + M     +    L + ++D     G  EEA  ++E + + 
Sbjct: 344 TLLRIYAGAQYREDALSVYKEMKGNGMDMTVDLYNRLLDMCADVGCIEEAVEIFEDMKSS 403

Query: 739 KNVYPDAV 746
               PD++
Sbjct: 404 GTCQPDSL 411



 Score = 52.8 bits (125), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 22/97 (22%), Positives = 49/97 (50%)

Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLI 402
           A+  F  ++     + D  T+++++ +     +      +L++M++ G QP +     L+
Sbjct: 393 AVEIFEDMKSSGTCQPDSLTFSSLITVYSCNGKVSEAEGMLNEMIQSGFQPTIYVLTSLV 452

Query: 403 HSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDI 439
             YGRA   ++ + +FKQ+  +G  PD    C L+++
Sbjct: 453 QCYGRAKQTDDVVKIFKQLLDLGIVPDVYFCCCLLNV 489


>gi|42408236|dbj|BAD09393.1| putative PPR protein [Oryza sativa Japonica Group]
 gi|125601932|gb|EAZ41257.1| hypothetical protein OsJ_25765 [Oryza sativa Japonica Group]
          Length = 798

 Score =  159 bits (403), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 108/422 (25%), Positives = 198/422 (46%), Gaps = 6/422 (1%)

Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLI 402
           A+G F  + R  G + D  TY T++G L +  +     K+ D MV+ G +PN  TY  L+
Sbjct: 292 AIGVFKRMCRD-GVEPDVFTYNTLMGYLCKNGRSMEARKIFDSMVKRGHKPNSATYGTLL 350

Query: 403 HSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLS 462
           H Y     L +   +   M   G +PD   +  LI  + K G +D AM ++ KM+  GL+
Sbjct: 351 HGYATEGSLVKMHHLLDMMVRNGIQPDHYIFNILIGTYTKHGKVDDAMLLFSKMRRQGLN 410

Query: 463 PDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKL 522
           PDT TY ++++ L   G +  A   F  ++++G  P+ V +  +I        +  A +L
Sbjct: 411 PDTVTYGIVMDALCMVGKVDDAMAQFGRLISEGLTPDAVVFRNLIHGLCARDKWDKAEEL 470

Query: 523 YRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGK 582
             +M   G  P+ + ++ ++  L   G +  A+ +F  M R +   D   Y  L+D +  
Sbjct: 471 AVEMIGRGICPNNIFFNTLLNHLCKEGMVARAKNIFDLMVRVDVQRDVITYNTLIDGYCL 530

Query: 583 AGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQT 642
            G V +A +  E M+  G++PN  T N++++ + + G++ DA+ L + M + G+ P + T
Sbjct: 531 HGKVDEAAKLLEGMVLDGVKPNEVTYNTMINGYCKNGRIEDAFSLFRQMASKGVNPGIVT 590

Query: 643 YTLLLSCCTEARSPYDMGFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMH 702
           Y+ +L    +AR        +  M  SG    +   ++   G    N  D      + ++
Sbjct: 591 YSTILQGLFQARRTAAAKELYLWMIKSGIKFDIGTYNIILLGLCQNNCTDDALRIFQNLY 650

Query: 703 SEDRESKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAVKEKGMSYWLINLHVMS 762
             D   +    + ++D L K G  +EA  ++     + + P+ V     +YWL+   ++ 
Sbjct: 651 LIDFHLENRTFNIMIDALLKGGRHDEAKDLFASLLARGLVPNVV-----TYWLMMKSLIE 705

Query: 763 DG 764
            G
Sbjct: 706 QG 707



 Score =  151 bits (382), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 105/360 (29%), Positives = 167/360 (46%), Gaps = 37/360 (10%)

Query: 331 NQVLKQLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDG 390
           N +L++ +    A   F+ +  Q G   D  TY +++  L +AR       +L +MV++G
Sbjct: 210 NGLLREGRQLDTAYHLFDQMLDQ-GLSPDVVTYNSIISALSKARAMDKAAVVLVRMVKNG 268

Query: 391 CQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAM 450
             PN +T+N L+H Y  +   N+A+ VFK+M   G EPD  TY TL+    K G    A 
Sbjct: 269 AMPNRITHNSLLHGYCSSGKPNDAIGVFKRMCRDGVEPDVFTYNTLMGYLCKNGRSMEAR 328

Query: 451 DMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQ 510
            ++  M   G  P++ TY  +++     G L   H L   MV  G  P+   +NI+I   
Sbjct: 329 KIFDSMVKRGHKPNSATYGTLLHGYATEGSLVKMHHLLDMMVRNGIQPDHYIFNILIGTY 388

Query: 511 AKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDE 570
            K      A+ L+  M+  G  PD VTY IVM+ L   G +D+A A F  +  +   PD 
Sbjct: 389 TKHGKVDDAMLLFSKMRRQGLNPDTVTYGIVMDALCMVGKVDDAMAQFGRLISEGLTPDA 448

Query: 571 PVYGLLV------DLWGKA-----------------------------GNVRKAWEWYEA 595
            V+  L+      D W KA                             G V +A   ++ 
Sbjct: 449 VVFRNLIHGLCARDKWDKAEELAVEMIGRGICPNNIFFNTLLNHLCKEGMVARAKNIFDL 508

Query: 596 MLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTY-TLLLSCCTEAR 654
           M++  ++ +V T N+L+  +   G++ +A  LL+GM+  G+KP+  TY T++   C   R
Sbjct: 509 MVRVDVQRDVITYNTLIDGYCLHGKVDEAAKLLEGMVLDGVKPNEVTYNTMINGYCKNGR 568



 Score =  132 bits (332), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 114/471 (24%), Positives = 210/471 (44%), Gaps = 23/471 (4%)

Query: 353 QAGFKHDEHTYTTMVGIL-GRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           ++G+  +  T++ ++  L  + R   A++  L +M   GC PNV +Y  L+      N  
Sbjct: 119 RSGWTAEAITFSPLLKALCDKKRTSEAMDIALRRMPVLGCTPNVFSYTILLKGLCDENRS 178

Query: 412 NEALDVFKQMQVV-----GCEPDRVTYCTLIDIHAKAGF-LDVAMDMYKKMQAAGLSPDT 465
            +AL +   M V      G  PD V+Y T+I+   + G  LD A  ++ +M   GLSPD 
Sbjct: 179 QQALHLLHTMMVADDTRGGYPPDVVSYNTVINGLLREGRQLDTAYHLFDQMLDQGLSPDV 238

Query: 466 FTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRD 525
            TY+ II+ L KA  +  A  +   MV  G +PN +T+N ++     +     A+ +++ 
Sbjct: 239 VTYNSIISALSKARAMDKAAVVLVRMVKNGAMPNRITHNSLLHGYCSSGKPNDAIGVFKR 298

Query: 526 MQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGN 585
           M   G EPD  TY+ +M  L   G   EA  +F  M ++   P+   YG L+  +   G+
Sbjct: 299 MCRDGVEPDVFTYNTLMGYLCKNGRSMEARKIFDSMVKRGHKPNSATYGTLLHGYATEGS 358

Query: 586 VRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTL 645
           + K     + M++ G++P+    N L+  + + G++ DA  L   M   GL P   TY +
Sbjct: 359 LVKMHHLLDMMVRNGIQPDHYIFNILIGTYTKHGKVDDAMLLFSKMRRQGLNPDTVTYGI 418

Query: 646 LL-SCCTEARSPYDMGFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSE 704
           ++ + C   +    M     L++    P  +   ++   G   ++  D        M   
Sbjct: 419 VMDALCMVGKVDDAMAQFGRLISEGLTPDAVVFRNLIH-GLCARDKWDKAEELAVEMIGR 477

Query: 705 DRESKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAVKEKGMSYWLINLHVMSDG 764
                    + +++ L K G+   A +++++  + +V  D          +I  + + DG
Sbjct: 478 GICPNNIFFNTLLNHLCKEGMVARAKNIFDLMVRVDVQRD----------VITYNTLIDG 527

Query: 765 TAVIALSRTLAWFRKQMLISGVGPSRI---DIVTGWGRRSRVTGT-SLVRQ 811
             +       A   + M++ GV P+ +    ++ G+ +  R+    SL RQ
Sbjct: 528 YCLHGKVDEAAKLLEGMVLDGVKPNEVTYNTMINGYCKNGRIEDAFSLFRQ 578



 Score =  122 bits (305), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 82/300 (27%), Positives = 147/300 (49%), Gaps = 11/300 (3%)

Query: 362 TYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDV-FKQ 420
           TY+ ++    R          L +++R G     +T++ L+ +       +EA+D+  ++
Sbjct: 93  TYSVVIDCCSRVGHLDLAFAALGRVIRSGWTAEAITFSPLLKALCDKKRTSEAMDIALRR 152

Query: 421 MQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAA-----GLSPDTFTYSVIINCL 475
           M V+GC P+  +Y  L+           A+ +   M  A     G  PD  +Y+ +IN L
Sbjct: 153 MPVLGCTPNVFSYTILLKGLCDENRSQQALHLLHTMMVADDTRGGYPPDVVSYNTVINGL 212

Query: 476 GKAG-HLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPD 534
            + G  L  A+ LF +M++QG  P++VTYN +I+  +KAR    A  +   M   G  P+
Sbjct: 213 LREGRQLDTAYHLFDQMLDQGLSPDVVTYNSIISALSKARAMDKAAVVLVRMVKNGAMPN 272

Query: 535 KVTYSIVMEVLGHC--GYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEW 592
           ++T++ ++   G+C  G  ++A  VF  M R    PD   Y  L+    K G   +A + 
Sbjct: 273 RITHNSLLH--GYCSSGKPNDAIGVFKRMCRDGVEPDVFTYNTLMGYLCKNGRSMEARKI 330

Query: 593 YEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTE 652
           +++M++ G +PN  T  +LL  +   G L   +HLL  M+  G++P    + +L+   T+
Sbjct: 331 FDSMVKRGHKPNSATYGTLLHGYATEGSLVKMHHLLDMMVRNGIQPDHYIFNILIGTYTK 390



 Score =  113 bits (282), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 70/257 (27%), Positives = 137/257 (53%), Gaps = 6/257 (2%)

Query: 368 GILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCE 427
           G++ RA+       + D MVR   Q +V+TYN LI  Y     ++EA  + + M + G +
Sbjct: 497 GMVARAKN------IFDLMVRVDVQRDVITYNTLIDGYCLHGKVDEAAKLLEGMVLDGVK 550

Query: 428 PDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQL 487
           P+ VTY T+I+ + K G ++ A  ++++M + G++P   TYS I+  L +A    AA +L
Sbjct: 551 PNEVTYNTMINGYCKNGRIEDAFSLFRQMASKGVNPGIVTYSTILQGLFQARRTAAAKEL 610

Query: 488 FCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGH 547
           +  M+  G   ++ TYNI++    +      AL++++++    F  +  T++I+++ L  
Sbjct: 611 YLWMIKSGIKFDIGTYNIILLGLCQNNCTDDALRIFQNLYLIDFHLENRTFNIMIDALLK 670

Query: 548 CGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPT 607
            G  DEA+ +FA +  +  VP+   Y L++    + G + +  + + ++ + G   N   
Sbjct: 671 GGRHDEAKDLFASLLARGLVPNVVTYWLMMKSLIEQGLLEELDDLFLSLEKNGCTANSRM 730

Query: 608 CNSLLSAFLRVGQLSDA 624
            N+L+   L+ G++  A
Sbjct: 731 LNALVGKLLQKGEVRKA 747



 Score = 94.4 bits (233), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 95/383 (24%), Positives = 166/383 (43%), Gaps = 29/383 (7%)

Query: 383 LDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVG---CEPDRVTYCTLIDI 439
            D+++      ++V  NR +    R +    A+ +F++M +V      P+ +TY  +ID 
Sbjct: 42  FDELLHRPTTSSIVDLNRALSDAARHSP-AVAISLFRRMVMVARPKVPPNLITYSVVIDC 100

Query: 440 HAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQL-FCEMVNQGCIP 498
            ++ G LD+A     ++  +G + +  T+S ++  L        A  +    M   GC P
Sbjct: 101 CSRVGHLDLAFAALGRVIRSGWTAEAITFSPLLKALCDKKRTSEAMDIALRRMPVLGCTP 160

Query: 499 NLVTYNIMIALQAKARNYQSALKLYRDMQNA-----GFEPDKVTYSIVMEVLGHCG-YLD 552
           N+ +Y I++         Q AL L   M  A     G+ PD V+Y+ V+  L   G  LD
Sbjct: 161 NVFSYTILLKGLCDENRSQQALHLLHTMMVADDTRGGYPPDVVSYNTVINGLLREGRQLD 220

Query: 553 EAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLL 612
            A  +F +M  +   PD   Y  ++    KA  + KA      M++ G  PN  T NSLL
Sbjct: 221 TAYHLFDQMLDQGLSPDVVTYNSIISALSKARAMDKAAVVLVRMVKNGAMPNRITHNSLL 280

Query: 613 SAFLRVGQLSDAYHLLQGMLNLGLKPSLQTY-TLLLSCCTEARSPYDMGFCHELMAVSGH 671
             +   G+ +DA  + + M   G++P + TY TL+   C   RS  +     + M   GH
Sbjct: 281 HGYCSSGKPNDAIGVFKRMCRDGVEPDVFTYNTLMGYLCKNGRS-MEARKIFDSMVKRGH 339

Query: 672 PAHMFLLSMPSPGPDGQNVRDHV--GSFLEMMHSEDRESKRG------LVDAVVDFLHKS 723
                    P+    G  +  +   GS ++M H  D   + G      + + ++    K 
Sbjct: 340 K--------PNSATYGTLLHGYATEGSLVKMHHLLDMMVRNGIQPDHYIFNILIGTYTKH 391

Query: 724 GLKEEAGSVWEVAAQKNVYPDAV 746
           G  ++A  ++    ++ + PD V
Sbjct: 392 GKVDDAMLLFSKMRRQGLNPDTV 414



 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 40/147 (27%), Positives = 76/147 (51%)

Query: 362 TYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQM 421
           TY+T++  L +AR+  A  +L   M++ G + ++ TYN ++    + N  ++AL +F+ +
Sbjct: 590 TYSTILQGLFQARRTAAAKELYLWMIKSGIKFDIGTYNIILLGLCQNNCTDDALRIFQNL 649

Query: 422 QVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHL 481
            ++    +  T+  +ID   K G  D A D++  + A GL P+  TY +++  L + G L
Sbjct: 650 YLIDFHLENRTFNIMIDALLKGGRHDEAKDLFASLLARGLVPNVVTYWLMMKSLIEQGLL 709

Query: 482 QAAHQLFCEMVNQGCIPNLVTYNIMIA 508
           +    LF  +   GC  N    N ++ 
Sbjct: 710 EELDDLFLSLEKNGCTANSRMLNALVG 736


>gi|449505568|ref|XP_004162510.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22670,
           mitochondrial-like [Cucumis sativus]
          Length = 614

 Score =  159 bits (403), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 98/357 (27%), Positives = 182/357 (50%), Gaps = 3/357 (0%)

Query: 293 STGNVVESVSRILRQWKWGPL-AEEALGNTNYSMDAYQANQVLKQLQ-DHTVALGFFNWL 350
           +  N V+ +S +L      P    EAL    Y +      Q+LK+   D   A G F W 
Sbjct: 161 TCNNEVDKISTMLENRYPSPENVAEALNGKAYRVSNTLVAQLLKRFHNDWIQAYGIFKWA 220

Query: 351 RRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANY 410
           + Q  ++H   +Y +MV ILG+A+ F  + +L+D+M       ++ T +++I    RA  
Sbjct: 221 KDQIPYRHSPESYNSMVDILGKAKNFRLMWELVDEMNHLAGSVSLETMSKVIRRLARAGR 280

Query: 411 LNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSV 470
             EA+  F+ ++  G   D      L+D   K   ++ A +++++++ + +  +  +++V
Sbjct: 281 HQEAIHAFRNIEKYGISTDTTAMNVLMDALVKEASVEDAHNVFRELKCS-IPFNLASFNV 339

Query: 471 IINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAG 530
           +I+   KA  L  A ++  E+   G  P++++Y   I    + +++++  K+   M++ G
Sbjct: 340 LIHGYCKAKKLDEAWKIMGEVEKSGLEPDVISYTAFIEAHCREKDFRNVDKVLVQMEHKG 399

Query: 531 FEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAW 590
            +P+ +T++I+M  LG    ++EA  V+ +M+++  VPD   Y  L+ + GKAG +    
Sbjct: 400 CKPNVITFTIIMHALGKAKQINEALKVYEKMKKEGCVPDSSFYSSLIFILGKAGRLTDVK 459

Query: 591 EWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
           E  E M + G+ P+V T N+L+S      Q   A  LL  M  +  KP L+TY  LL
Sbjct: 460 EIVEDMEKQGVTPDVLTYNTLISCACAHSQEETALTLLLKMEEVSCKPDLKTYHPLL 516



 Score =  128 bits (322), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 69/225 (30%), Positives = 118/225 (52%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
            ++G + D  +YT  +    R + F  ++K+L QM   GC+PNV+T+  ++H+ G+A  +
Sbjct: 361 EKSGLEPDVISYTAFIEAHCREKDFRNVDKVLVQMEHKGCKPNVITFTIIMHALGKAKQI 420

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
           NEAL V+++M+  GC PD   Y +LI I  KAG L    ++ + M+  G++PD  TY+ +
Sbjct: 421 NEALKVYEKMKKEGCVPDSSFYSSLIFILGKAGRLTDVKEIVEDMEKQGVTPDVLTYNTL 480

Query: 472 INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF 531
           I+C       + A  L  +M    C P+L TY+ ++ +  + +  +    L   M     
Sbjct: 481 ISCACAHSQEETALTLLLKMEEVSCKPDLKTYHPLLKMFCRKKRMKVLKFLLDHMFKNDV 540

Query: 532 EPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLL 576
             +  TY+I++  L   G L  A + F EM  K  VP +  + +L
Sbjct: 541 SIEAGTYAILVRGLCENGKLHLACSFFGEMLSKAMVPKDSTFKML 585



 Score =  108 bits (270), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 62/262 (23%), Positives = 124/262 (47%)

Query: 362 TYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQM 421
           ++  ++    +A++     K++ ++ + G +P+V++Y   I ++ R         V  QM
Sbjct: 336 SFNVLIHGYCKAKKLDEAWKIMGEVEKSGLEPDVISYTAFIEAHCREKDFRNVDKVLVQM 395

Query: 422 QVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHL 481
           +  GC+P+ +T+  ++    KA  ++ A+ +Y+KM+  G  PD+  YS +I  LGKAG L
Sbjct: 396 EHKGCKPNVITFTIIMHALGKAKQINEALKVYEKMKKEGCVPDSSFYSSLIFILGKAGRL 455

Query: 482 QAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIV 541
               ++  +M  QG  P+++TYN +I+        ++AL L   M+    +PD  TY  +
Sbjct: 456 TDVKEIVEDMEKQGVTPDVLTYNTLISCACAHSQEETALTLLLKMEEVSCKPDLKTYHPL 515

Query: 542 MEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGL 601
           +++      +   + +   M + +   +   Y +LV    + G +  A  ++  ML   +
Sbjct: 516 LKMFCRKKRMKVLKFLLDHMFKNDVSIEAGTYAILVRGLCENGKLHLACSFFGEMLSKAM 575

Query: 602 RPNVPTCNSLLSAFLRVGQLSD 623
            P   T   L     R   L +
Sbjct: 576 VPKDSTFKMLKEELERKSMLEE 597


>gi|212274745|ref|NP_001130291.1| uncharacterized protein LOC100191385 [Zea mays]
 gi|194688762|gb|ACF78465.1| unknown [Zea mays]
 gi|223949231|gb|ACN28699.1| unknown [Zea mays]
 gi|414874010|tpg|DAA52567.1| TPA: salt-inducible protein [Zea mays]
          Length = 716

 Score =  159 bits (403), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 122/502 (24%), Positives = 220/502 (43%), Gaps = 16/502 (3%)

Query: 354 AGFKHDEHTYTTMVGILGRARQFGAINKLLDQM-VRDGCQPNVVTYNRLIHSYGRANYLN 412
           AG   D  TY+T++    R RQF    +  ++M   DG  P+ VTY+ ++  Y +     
Sbjct: 216 AGVPLDNITYSTLITAARRCRQFAKAVEWFERMYAADGVLPDEVTYSAVLDVYAQLGMKE 275

Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
           E L +F + +  G +PD V +  L  +  +AG  D    ++K+M+  G+ P+ F Y+ ++
Sbjct: 276 EVLALFDRARGSGWKPDHVAFAVLAKMFGEAGDYDGIQFVFKEMREVGIKPNIFVYNALL 335

Query: 473 NCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFE 532
             LGK G    A  LF EM++QG  PN  T   +  +  +AR  + AL+L+  M+     
Sbjct: 336 EALGKTGKPGLARNLFEEMIDQGVEPNARTLTALAKIYGRARWGRDALQLWDKMRELKLP 395

Query: 533 PDKVTYSIVMEVLGHCGYLDEAEAVFAEMR----RKNWVPDEPVYGLLVDLWGKAGNVRK 588
            D +  + ++ +    G + EAE +F EM+    R    PD+  Y  +++++G  G+   
Sbjct: 396 ADSILCNTLLSMCADVGLVAEAEQLFNEMKDPECRDVPKPDKWSYTAMINIYGSNGDTDS 455

Query: 589 AWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
           A + +  ML+ G+ PN+ +   ++    +  ++  A  +L+  L  GLKP  +    LLS
Sbjct: 456 ALQLFAEMLKGGIEPNIMSYTIVIQCLGKARRIQQAVEVLESGLEKGLKPDDRLCGCLLS 515

Query: 649 CCTEARSPYDMGFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLE-MMHSEDRE 707
                      G   E++  S    +  L+ +     D Q   D +   L+ +++S   E
Sbjct: 516 VIA-----LSSGEEMEMVLSSLEKVNQNLVKLIRVLGDAQVGGDDITEELKSVLNSAAPE 570

Query: 708 SKRGLVDAVVDFLHKSGL-KEEAGSVWEVAAQKNVYPDAVKEKGMSYWLINLHVMSDGTA 766
            +R   + ++D     G   + A  V+ +A    +Y   ++ +    W ++L  +S G A
Sbjct: 571 VRRPYCNCLIDVCRNHGFPPQRAREVFHLAQTYGLY-SKLQSRKDEEWSLDLRSLSVGAA 629

Query: 767 VIALSRTLAWFRKQMLISGVGPSRIDIVTGWGRRSRVTGTSLVRQAVQELLHMFSFPFFT 826
             A    +    ++       P    + TG        G +    A    L   + PF  
Sbjct: 630 KTAFDDWMQTVSERWAQQKDLPESFSVYTGSSTHKFAQGLA---SAFAAHLDQMAVPFHA 686

Query: 827 ENGNSGCFVGCGEPLNKWLLQS 848
               +G F+   + L  WL  S
Sbjct: 687 SESQAGSFISSRDDLVSWLQMS 708



 Score =  108 bits (270), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 67/249 (26%), Positives = 118/249 (47%), Gaps = 5/249 (2%)

Query: 333 VLKQLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQ 392
           V  QL      L  F+   R +G+K D   +  +  + G A  +  I  +  +M   G +
Sbjct: 267 VYAQLGMKEEVLALFD-RARGSGWKPDHVAFAVLAKMFGEAGDYDGIQFVFKEMREVGIK 325

Query: 393 PNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDM 452
           PN+  YN L+ + G+      A ++F++M   G EP+  T   L  I+ +A +   A+ +
Sbjct: 326 PNIFVYNALLEALGKTGKPGLARNLFEEMIDQGVEPNARTLTALAKIYGRARWGRDALQL 385

Query: 453 YKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGC----IPNLVTYNIMIA 508
           + KM+   L  D+   + +++     G +  A QLF EM +  C     P+  +Y  MI 
Sbjct: 386 WDKMRELKLPADSILCNTLLSMCADVGLVAEAEQLFNEMKDPECRDVPKPDKWSYTAMIN 445

Query: 509 LQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVP 568
           +     +  SAL+L+ +M   G EP+ ++Y+IV++ LG    + +A  V      K   P
Sbjct: 446 IYGSNGDTDSALQLFAEMLKGGIEPNIMSYTIVIQCLGKARRIQQAVEVLESGLEKGLKP 505

Query: 569 DEPVYGLLV 577
           D+ + G L+
Sbjct: 506 DDRLCGCLL 514



 Score =  100 bits (248), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 65/239 (27%), Positives = 117/239 (48%), Gaps = 2/239 (0%)

Query: 418 FKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSP-DTFTYSVIINCLG 476
           F Q Q  G  P       L++    +    +++  + +   AG  P DT  ++V +  L 
Sbjct: 139 FLQQQGQGAAPSPSDALLLLNYLHPSWRKSLSLLAWLRALPAGAFPLDTIFFNVALKSLR 198

Query: 477 KAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNA-GFEPDK 535
            A     A +L  +M++ G   + +TY+ +I    + R +  A++ +  M  A G  PD+
Sbjct: 199 AARQWPHAERLALDMLDAGVPLDNITYSTLITAARRCRQFAKAVEWFERMYAADGVLPDE 258

Query: 536 VTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEA 595
           VTYS V++V    G  +E  A+F   R   W PD   + +L  ++G+AG+       ++ 
Sbjct: 259 VTYSAVLDVYAQLGMKEEVLALFDRARGSGWKPDHVAFAVLAKMFGEAGDYDGIQFVFKE 318

Query: 596 MLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEAR 654
           M + G++PN+   N+LL A  + G+   A +L + M++ G++P+ +T T L      AR
Sbjct: 319 MREVGIKPNIFVYNALLEALGKTGKPGLARNLFEEMIDQGVEPNARTLTALAKIYGRAR 377


>gi|297797161|ref|XP_002866465.1| hypothetical protein ARALYDRAFT_496372 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297312300|gb|EFH42724.1| hypothetical protein ARALYDRAFT_496372 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 977

 Score =  159 bits (403), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 101/288 (35%), Positives = 145/288 (50%), Gaps = 2/288 (0%)

Query: 361 HTYTTMV-GILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFK 419
           +TY T V G+       GA N ++ +M   GC+PNVV Y  LI ++ + +   +A+ V K
Sbjct: 421 YTYGTAVKGMCSSGDLDGAYN-IVKEMGASGCRPNVVIYTTLIKTFLQKSRFGDAVRVLK 479

Query: 420 QMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAG 479
           +M+  G  PD   Y +LI   +KA  +D A     +M   G  PD FTY   I+   +AG
Sbjct: 480 EMREQGIAPDTFCYNSLIIGLSKAKKMDEARSFLLEMVENGFKPDAFTYGAFISGYIEAG 539

Query: 480 HLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYS 539
              +A +   EM+  G IPN V    +I    K      A   +R M   G   D  TY+
Sbjct: 540 EFASADKYVKEMLECGVIPNKVLCTGLINEYCKKGKVIEACSAFRSMVEQGILGDAKTYT 599

Query: 540 IVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQA 599
           ++M  L   G +++AE +F EMR K   PD   YG L+D + K GN++KA   ++ M+QA
Sbjct: 600 VLMNGLVKNGKVNDAEEIFHEMRGKGIAPDVFSYGTLIDGFSKLGNMQKASSIFDEMVQA 659

Query: 600 GLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
           GL  NV   N LL  F R G++  A  LL  M   G  P+  TY  ++
Sbjct: 660 GLTSNVIIYNMLLGGFCRSGEIEKAKELLDEMSGKGFPPNAVTYCTII 707



 Score =  143 bits (361), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 106/402 (26%), Positives = 188/402 (46%), Gaps = 11/402 (2%)

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
           + GFK D  TY   +     A +F + +K + +M+  G  PN V    LI+ Y +   + 
Sbjct: 518 ENGFKPDAFTYGAFISGYIEAGEFASADKYVKEMLECGVIPNKVLCTGLINEYCKKGKVI 577

Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
           EA   F+ M   G   D  TY  L++   K G ++ A +++ +M+  G++PD F+Y  +I
Sbjct: 578 EACSAFRSMVEQGILGDAKTYTVLMNGLVKNGKVNDAEEIFHEMRGKGIAPDVFSYGTLI 637

Query: 473 NCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFE 532
           +   K G++Q A  +F EMV  G   N++ YN+++    ++   + A +L  +M   GF 
Sbjct: 638 DGFSKLGNMQKASSIFDEMVQAGLTSNVIIYNMLLGGFCRSGEIEKAKELLDEMSGKGFP 697

Query: 533 PDKVTYSIVMEVLGHC--GYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAW 590
           P+ VTY  +++  G+C  G L EA  +F EM+ K  VPD  VY  LVD   +  +V +A 
Sbjct: 698 PNAVTYCTIID--GYCKSGDLAEAFQLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAI 755

Query: 591 EWYEAMLQAGLRPNVPTCNSLLSAFLRVGQ---LSDAYH-LLQGMLNLGLKPSLQTYTLL 646
             +E   +     + P  N+L++   + G+    +D  + L+ G  +   KP+  TY ++
Sbjct: 756 TIFETNEKGCASSSAPF-NALINWVFKFGKTELTTDMINRLMDGSFDKFGKPNDVTYNIM 814

Query: 647 LS-CCTEARSPYDMGFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSED 705
           +   C E          H +   +  P  +   S+ + G D    R  + S  + + +  
Sbjct: 815 IDYLCKEGNLEAAKELFHHMQKANLMPTVITYTSLLN-GYDKMGRRSEMFSVFDEVIAAG 873

Query: 706 RESKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAVK 747
            E    +   +++   K G+  +A  + +    KN   D  K
Sbjct: 874 IEPDNIMYSVIINAFLKEGMTTKALVLLDQMFAKNAVDDGCK 915



 Score =  136 bits (343), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 89/341 (26%), Positives = 154/341 (45%), Gaps = 45/341 (13%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           R  G   D  +Y T++    +       + + D+MV+ G   NV+ YN L+  + R+  +
Sbjct: 622 RGKGIAPDVFSYGTLIDGFSKLGNMQKASSIFDEMVQAGLTSNVIIYNMLLGGFCRSGEI 681

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
            +A ++  +M   G  P+ VTYCT+ID + K+G L  A  ++ +M+  GL PD+F Y+ +
Sbjct: 682 EKAKELLDEMSGKGFPPNAVTYCTIIDGYCKSGDLAEAFQLFDEMKLKGLVPDSFVYTTL 741

Query: 472 INCLGKAGHLQAAHQLFCEMVNQGCI---------------------------------- 497
           ++   +   ++ A  +F E   +GC                                   
Sbjct: 742 VDGCCRLNDVERAITIF-ETNEKGCASSSAPFNALINWVFKFGKTELTTDMINRLMDGSF 800

Query: 498 -----PNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLD 552
                PN VTYNIMI    K  N ++A +L+  MQ A   P  +TY+ ++      G   
Sbjct: 801 DKFGKPNDVTYNIMIDYLCKEGNLEAAKELFHHMQKANLMPTVITYTSLLNGYDKMGRRS 860

Query: 553 EAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQA-----GLRPNVPT 607
           E  +VF E+      PD  +Y ++++ + K G   KA    + M        G + ++ T
Sbjct: 861 EMFSVFDEVIAAGIEPDNIMYSVIINAFLKEGMTTKALVLLDQMFAKNAVDDGCKLSIST 920

Query: 608 CNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
           C +LLS F +VG++  A  +++ M+ L   P   T   L++
Sbjct: 921 CRALLSGFAKVGEMEVAEKVVENMVRLKYIPDSSTVIELIN 961



 Score =  130 bits (327), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 95/374 (25%), Positives = 168/374 (44%), Gaps = 7/374 (1%)

Query: 280 IPAGLAPFSRHFASTGNVVESVSRILRQWKWGPLAEEALGNTNYSMDAYQANQVLKQLQD 339
           I  G+ P +R +AS   ++E   R     K   L  E +   N  +  Y     +K +  
Sbjct: 377 ITFGVTPGARAYAS---LIEGFFREKNVRKGYELLVE-IKKRNIVISPYTYGTAVKGMCS 432

Query: 340 HTVALGFFNWLRRQ--AGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVT 397
                G +N ++    +G + +   YTT++    +  +FG   ++L +M   G  P+   
Sbjct: 433 SGDLDGAYNIVKEMGASGCRPNVVIYTTLIKTFLQKSRFGDAVRVLKEMREQGIAPDTFC 492

Query: 398 YNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQ 457
           YN LI    +A  ++EA     +M   G +PD  TY   I  + +AG    A    K+M 
Sbjct: 493 YNSLIIGLSKAKKMDEARSFLLEMVENGFKPDAFTYGAFISGYIEAGEFASADKYVKEML 552

Query: 458 AAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQ 517
             G+ P+    + +IN   K G +  A   F  MV QG + +  TY +++    K     
Sbjct: 553 ECGVIPNKVLCTGLINEYCKKGKVIEACSAFRSMVEQGILGDAKTYTVLMNGLVKNGKVN 612

Query: 518 SALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLV 577
            A +++ +M+  G  PD  +Y  +++     G + +A ++F EM +     +  +Y +L+
Sbjct: 613 DAEEIFHEMRGKGIAPDVFSYGTLIDGFSKLGNMQKASSIFDEMVQAGLTSNVIIYNMLL 672

Query: 578 DLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLK 637
             + ++G + KA E  + M   G  PN  T  +++  + + G L++A+ L   M   GL 
Sbjct: 673 GGFCRSGEIEKAKELLDEMSGKGFPPNAVTYCTIIDGYCKSGDLAEAFQLFDEMKLKGLV 732

Query: 638 PSLQTYTLLLS-CC 650
           P    YT L+  CC
Sbjct: 733 PDSFVYTTLVDGCC 746



 Score =  122 bits (307), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 71/278 (25%), Positives = 137/278 (49%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           R+ G   D   Y +++  L +A++       L +MV +G +P+  TY   I  Y  A   
Sbjct: 482 REQGIAPDTFCYNSLIIGLSKAKKMDEARSFLLEMVENGFKPDAFTYGAFISGYIEAGEF 541

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
             A    K+M   G  P++V    LI+ + K G +  A   ++ M   G+  D  TY+V+
Sbjct: 542 ASADKYVKEMLECGVIPNKVLCTGLINEYCKKGKVIEACSAFRSMVEQGILGDAKTYTVL 601

Query: 472 INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF 531
           +N L K G +  A ++F EM  +G  P++ +Y  +I   +K  N Q A  ++ +M  AG 
Sbjct: 602 MNGLVKNGKVNDAEEIFHEMRGKGIAPDVFSYGTLIDGFSKLGNMQKASSIFDEMVQAGL 661

Query: 532 EPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWE 591
             + + Y++++      G +++A+ +  EM  K + P+   Y  ++D + K+G++ +A++
Sbjct: 662 TSNVIIYNMLLGGFCRSGEIEKAKELLDEMSGKGFPPNAVTYCTIIDGYCKSGDLAEAFQ 721

Query: 592 WYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQ 629
            ++ M   GL P+     +L+    R+  +  A  + +
Sbjct: 722 LFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFE 759



 Score =  108 bits (270), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 83/391 (21%), Positives = 162/391 (41%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           GF  D   Y   + ++ +         L D M+  G  P    Y  LI  + R   + + 
Sbjct: 345 GFSIDPMMYDYFICVMSKEGAMEKAKALFDGMITFGVTPGARAYASLIEGFFREKNVRKG 404

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
            ++  +++         TY T +     +G LD A ++ K+M A+G  P+   Y+ +I  
Sbjct: 405 YELLVEIKKRNIVISPYTYGTAVKGMCSSGDLDGAYNIVKEMGASGCRPNVVIYTTLIKT 464

Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPD 534
             +      A ++  EM  QG  P+   YN +I   +KA+    A     +M   GF+PD
Sbjct: 465 FLQKSRFGDAVRVLKEMREQGIAPDTFCYNSLIIGLSKAKKMDEARSFLLEMVENGFKPD 524

Query: 535 KVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYE 594
             TY   +      G    A+    EM     +P++ +   L++ + K G V +A   + 
Sbjct: 525 AFTYGAFISGYIEAGEFASADKYVKEMLECGVIPNKVLCTGLINEYCKKGKVIEACSAFR 584

Query: 595 AMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEAR 654
           +M++ G+  +  T   L++  ++ G+++DA  +   M   G+ P + +Y  L+   ++  
Sbjct: 585 SMVEQGILGDAKTYTVLMNGLVKNGKVNDAEEIFHEMRGKGIAPDVFSYGTLIDGFSKLG 644

Query: 655 SPYDMGFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRESKRGLVD 714
           +        + M  +G  +++ + +M   G       +     L+ M  +          
Sbjct: 645 NMQKASSIFDEMVQAGLTSNVIIYNMLLGGFCRSGEIEKAKELLDEMSGKGFPPNAVTYC 704

Query: 715 AVVDFLHKSGLKEEAGSVWEVAAQKNVYPDA 745
            ++D   KSG   EA  +++    K + PD+
Sbjct: 705 TIIDGYCKSGDLAEAFQLFDEMKLKGLVPDS 735



 Score = 89.4 bits (220), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 71/276 (25%), Positives = 124/276 (44%), Gaps = 21/276 (7%)

Query: 393 PNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFL------ 446
           P++   N L+ +  + N L+   DV+K M       D  +Y  LI  H + G +      
Sbjct: 187 PSLARCNHLLDALLKRNRLDLFWDVYKGMVERNVVFDVQSYEMLIGAHCRDGNVQLAKDV 246

Query: 447 ---------------DVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEM 491
                          D A+++ K M   GL P   +Y+++I+ L K   L+ A  L  EM
Sbjct: 247 LLKTEEELGTATLNVDEALELKKSMSCKGLVPSRQSYNLLIDGLCKQKRLEDAKSLLVEM 306

Query: 492 VNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYL 551
            + G   + V Y+I+I    K RN  +A  L  +M + GF  D + Y   + V+   G +
Sbjct: 307 NSVGLFADNVAYSILIDGLLKGRNADAANGLVHEMVSHGFSIDPMMYDYFICVMSKEGAM 366

Query: 552 DEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSL 611
           ++A+A+F  M      P    Y  L++ + +  NVRK +E    + +  +  +  T  + 
Sbjct: 367 EKAKALFDGMITFGVTPGARAYASLIEGFFREKNVRKGYELLVEIKKRNIVISPYTYGTA 426

Query: 612 LSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
           +      G L  AY++++ M   G +P++  YT L+
Sbjct: 427 VKGMCSSGDLDGAYNIVKEMGASGCRPNVVIYTTLI 462



 Score = 89.0 bits (219), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 70/285 (24%), Positives = 117/285 (41%), Gaps = 35/285 (12%)

Query: 390 GCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVA 449
           G  P+  +YN LI    +   L +A  +  +M  VG   D V Y  LID   K    D A
Sbjct: 275 GLVPSRQSYNLLIDGLCKQKRLEDAKSLLVEMNSVGLFADNVAYSILIDGLLKGRNADAA 334

Query: 450 MDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIA- 508
             +  +M + G S D   Y   I  + K G ++ A  LF  M+  G  P    Y  +I  
Sbjct: 335 NGLVHEMVSHGFSIDPMMYDYFICVMSKEGAMEKAKALFDGMITFGVTPGARAYASLIEG 394

Query: 509 --------------LQAKARN-------YQSALK-------------LYRDMQNAGFEPD 534
                         ++ K RN       Y +A+K             + ++M  +G  P+
Sbjct: 395 FFREKNVRKGYELLVEIKKRNIVISPYTYGTAVKGMCSSGDLDGAYNIVKEMGASGCRPN 454

Query: 535 KVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYE 594
            V Y+ +++         +A  V  EMR +   PD   Y  L+    KA  + +A  +  
Sbjct: 455 VVIYTTLIKTFLQKSRFGDAVRVLKEMREQGIAPDTFCYNSLIIGLSKAKKMDEARSFLL 514

Query: 595 AMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPS 639
            M++ G +P+  T  + +S ++  G+ + A   ++ ML  G+ P+
Sbjct: 515 EMVENGFKPDAFTYGAFISGYIEAGEFASADKYVKEMLECGVIPN 559


>gi|255558280|ref|XP_002520167.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223540659|gb|EEF42222.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 604

 Score =  159 bits (403), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 114/380 (30%), Positives = 184/380 (48%), Gaps = 20/380 (5%)

Query: 376 FGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCT 435
            G + K+  +  + G   N  +YN L++S  R   + EA  +  +M+  GC PD V+Y T
Sbjct: 91  LGMVLKVFSEFPQLGVCWNTESYNILMNSLFRLGKIREAHHLLMRMEFKGCIPDVVSYTT 150

Query: 436 LIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQG 495
           +ID +   G L   + + K+MQ  GL P+ +TYS II  L K+G +    ++  EM+ +G
Sbjct: 151 IIDGYCHVGELQKVVQLVKEMQLKGLKPNLYTYSSIILLLCKSGKVVEGEKVLREMMKRG 210

Query: 496 CIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAE 555
             P+ V Y  +I    K  N Q+A KL+ +M+     PD + +S ++  L   G + EA+
Sbjct: 211 VFPDHVIYTTLIDGFCKLGNTQAAYKLFSEMEAREIVPDSIAFSALICGLSGSGKVVEAD 270

Query: 556 AVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAF 615
            +F EM +K + PDE  Y  L+D + K G ++KA+  +  M+Q GL PNV T  +L    
Sbjct: 271 KLFNEMIKKGFEPDEVTYTALIDGYCKLGEMKKAFFLHNQMVQIGLTPNVVTYTALADGL 330

Query: 616 LRVGQLSDAYHLLQGMLNLGLKPSLQTY-TLLLSCCTEARSPYDMGFCHELMAVSGHPAH 674
            + G+L  A  LL  M   GL+ ++ TY T++   C        +    E+     HP  
Sbjct: 331 CKSGELDTANELLHEMCRKGLQLNISTYNTIVNGLCKAGNILQAVKLMEEMKEAGLHPDT 390

Query: 675 M-FLLSMPSPGPDGQNV--RDHVGSFLEMMHSEDRESKRGLVDAVVDF------LHKSGL 725
           + +   M +    G+ V  R+ +   L+          RGL   VV F      L  SG 
Sbjct: 391 ITYTTLMDAYYKTGEMVKARELLREMLD----------RGLQPTVVTFNVLMNGLCMSGK 440

Query: 726 KEEAGSVWEVAAQKNVYPDA 745
            E+   + +   +K + P+A
Sbjct: 441 LEDGERLLKWMLEKGIMPNA 460



 Score =  153 bits (386), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 91/290 (31%), Positives = 153/290 (52%)

Query: 359 DEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVF 418
           D  +YTT++       +   + +L+ +M   G +PN+ TY+ +I    ++  + E   V 
Sbjct: 144 DVVSYTTIIDGYCHVGELQKVVQLVKEMQLKGLKPNLYTYSSIILLLCKSGKVVEGEKVL 203

Query: 419 KQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKA 478
           ++M   G  PD V Y TLID   K G    A  ++ +M+A  + PD+  +S +I  L  +
Sbjct: 204 REMMKRGVFPDHVIYTTLIDGFCKLGNTQAAYKLFSEMEAREIVPDSIAFSALICGLSGS 263

Query: 479 GHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTY 538
           G +  A +LF EM+ +G  P+ VTY  +I    K    + A  L+  M   G  P+ VTY
Sbjct: 264 GKVVEADKLFNEMIKKGFEPDEVTYTALIDGYCKLGEMKKAFFLHNQMVQIGLTPNVVTY 323

Query: 539 SIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQ 598
           + + + L   G LD A  +  EM RK    +   Y  +V+   KAGN+ +A +  E M +
Sbjct: 324 TALADGLCKSGELDTANELLHEMCRKGLQLNISTYNTIVNGLCKAGNILQAVKLMEEMKE 383

Query: 599 AGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
           AGL P+  T  +L+ A+ + G++  A  LL+ ML+ GL+P++ T+ +L++
Sbjct: 384 AGLHPDTITYTTLMDAYYKTGEMVKARELLREMLDRGLQPTVVTFNVLMN 433



 Score =  140 bits (354), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 88/309 (28%), Positives = 151/309 (48%)

Query: 359 DEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVF 418
           D   YTT++    +     A  KL  +M      P+ + ++ LI     +  + EA  +F
Sbjct: 214 DHVIYTTLIDGFCKLGNTQAAYKLFSEMEAREIVPDSIAFSALICGLSGSGKVVEADKLF 273

Query: 419 KQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKA 478
            +M   G EPD VTY  LID + K G +  A  ++ +M   GL+P+  TY+ + + L K+
Sbjct: 274 NEMIKKGFEPDEVTYTALIDGYCKLGEMKKAFFLHNQMVQIGLTPNVVTYTALADGLCKS 333

Query: 479 GHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTY 538
           G L  A++L  EM  +G   N+ TYN ++    KA N   A+KL  +M+ AG  PD +TY
Sbjct: 334 GELDTANELLHEMCRKGLQLNISTYNTIVNGLCKAGNILQAVKLMEEMKEAGLHPDTITY 393

Query: 539 SIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQ 598
           + +M+     G + +A  +  EM  +   P    + +L++    +G +       + ML+
Sbjct: 394 TTLMDAYYKTGEMVKARELLREMLDRGLQPTVVTFNVLMNGLCMSGKLEDGERLLKWMLE 453

Query: 599 AGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYD 658
            G+ PN  T NS++  +     +  +  + +GM   G+ P   TY +L+    +AR+  +
Sbjct: 454 KGIMPNAATYNSIMKQYCIRNNMRISTEIYRGMCAQGVVPDSNTYNILIKGHCKARNMKE 513

Query: 659 MGFCHELMA 667
             F H+ M 
Sbjct: 514 AWFLHKEMV 522



 Score =  133 bits (334), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 84/289 (29%), Positives = 143/289 (49%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           G K + +TY++++ +L ++ +     K+L +M++ G  P+ V Y  LI  + +      A
Sbjct: 175 GLKPNLYTYSSIILLLCKSGKVVEGEKVLREMMKRGVFPDHVIYTTLIDGFCKLGNTQAA 234

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
             +F +M+     PD + +  LI   + +G +  A  ++ +M   G  PD  TY+ +I+ 
Sbjct: 235 YKLFSEMEAREIVPDSIAFSALICGLSGSGKVVEADKLFNEMIKKGFEPDEVTYTALIDG 294

Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPD 534
             K G ++ A  L  +MV  G  PN+VTY  +     K+    +A +L  +M   G + +
Sbjct: 295 YCKLGEMKKAFFLHNQMVQIGLTPNVVTYTALADGLCKSGELDTANELLHEMCRKGLQLN 354

Query: 535 KVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYE 594
             TY+ ++  L   G + +A  +  EM+     PD   Y  L+D + K G + KA E   
Sbjct: 355 ISTYNTIVNGLCKAGNILQAVKLMEEMKEAGLHPDTITYTTLMDAYYKTGEMVKARELLR 414

Query: 595 AMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTY 643
            ML  GL+P V T N L++     G+L D   LL+ ML  G+ P+  TY
Sbjct: 415 EMLDRGLQPTVVTFNVLMNGLCMSGKLEDGERLLKWMLEKGIMPNAATY 463



 Score =  130 bits (327), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 83/302 (27%), Positives = 155/302 (51%), Gaps = 1/302 (0%)

Query: 346 FFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSY 405
            FN + ++ GF+ DE TYT ++    +  +      L +QMV+ G  PNVVTY  L    
Sbjct: 272 LFNEMIKK-GFEPDEVTYTALIDGYCKLGEMKKAFFLHNQMVQIGLTPNVVTYTALADGL 330

Query: 406 GRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDT 465
            ++  L+ A ++  +M   G + +  TY T+++   KAG +  A+ + ++M+ AGL PDT
Sbjct: 331 CKSGELDTANELLHEMCRKGLQLNISTYNTIVNGLCKAGNILQAVKLMEEMKEAGLHPDT 390

Query: 466 FTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRD 525
            TY+ +++   K G +  A +L  EM+++G  P +VT+N+++     +   +   +L + 
Sbjct: 391 ITYTTLMDAYYKTGEMVKARELLREMLDRGLQPTVVTFNVLMNGLCMSGKLEDGERLLKW 450

Query: 526 MQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGN 585
           M   G  P+  TY+ +M+       +  +  ++  M  +  VPD   Y +L+    KA N
Sbjct: 451 MLEKGIMPNAATYNSIMKQYCIRNNMRISTEIYRGMCAQGVVPDSNTYNILIKGHCKARN 510

Query: 586 VRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTL 645
           +++AW  ++ M++        + N+L+  F +  +L +A  L + M   GL  S + Y L
Sbjct: 511 MKEAWFLHKEMVEKRFNLTASSYNALIKGFFKRKKLLEARQLFEEMRREGLVASAEIYNL 570

Query: 646 LL 647
            +
Sbjct: 571 FV 572



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 78/268 (29%), Positives = 135/268 (50%)

Query: 380 NKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDI 439
           +KL ++M++ G +P+ VTY  LI  Y +   + +A  +  QM  +G  P+ VTY  L D 
Sbjct: 270 DKLFNEMIKKGFEPDEVTYTALIDGYCKLGEMKKAFFLHNQMVQIGLTPNVVTYTALADG 329

Query: 440 HAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPN 499
             K+G LD A ++  +M   GL  +  TY+ I+N L KAG++  A +L  EM   G  P+
Sbjct: 330 LCKSGELDTANELLHEMCRKGLQLNISTYNTIVNGLCKAGNILQAVKLMEEMKEAGLHPD 389

Query: 500 LVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFA 559
            +TY  ++    K      A +L R+M + G +P  VT++++M  L   G L++ E +  
Sbjct: 390 TITYTTLMDAYYKTGEMVKARELLREMLDRGLQPTVVTFNVLMNGLCMSGKLEDGERLLK 449

Query: 560 EMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVG 619
            M  K  +P+   Y  ++  +    N+R + E Y  M   G+ P+  T N L+    +  
Sbjct: 450 WMLEKGIMPNAATYNSIMKQYCIRNNMRISTEIYRGMCAQGVVPDSNTYNILIKGHCKAR 509

Query: 620 QLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
            + +A+ L + M+      +  +Y  L+
Sbjct: 510 NMKEAWFLHKEMVEKRFNLTASSYNALI 537



 Score =  115 bits (288), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 76/289 (26%), Positives = 134/289 (46%), Gaps = 1/289 (0%)

Query: 359 DEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYG-RANYLNEALDV 417
           D H +     +L  A       K  D+++  G   +  + N  +     + + L   L V
Sbjct: 38  DPHVFDVFFQVLVEAGLLNEARKFFDKLLNYGVALSAGSCNLYLTCLSSKRDMLGMVLKV 97

Query: 418 FKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGK 477
           F +   +G   +  +Y  L++   + G +  A  +  +M+  G  PD  +Y+ II+    
Sbjct: 98  FSEFPQLGVCWNTESYNILMNSLFRLGKIREAHHLLMRMEFKGCIPDVVSYTTIIDGYCH 157

Query: 478 AGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVT 537
            G LQ   QL  EM  +G  PNL TY+ +I L  K+       K+ R+M   G  PD V 
Sbjct: 158 VGELQKVVQLVKEMQLKGLKPNLYTYSSIILLLCKSGKVVEGEKVLREMMKRGVFPDHVI 217

Query: 538 YSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAML 597
           Y+ +++     G    A  +F+EM  +  VPD   +  L+     +G V +A + +  M+
Sbjct: 218 YTTLIDGFCKLGNTQAAYKLFSEMEAREIVPDSIAFSALICGLSGSGKVVEADKLFNEMI 277

Query: 598 QAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLL 646
           + G  P+  T  +L+  + ++G++  A+ L   M+ +GL P++ TYT L
Sbjct: 278 KKGFEPDEVTYTALIDGYCKLGEMKKAFFLHNQMVQIGLTPNVVTYTAL 326



 Score =  112 bits (281), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 85/359 (23%), Positives = 160/359 (44%), Gaps = 5/359 (1%)

Query: 390 GCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTL--IDIHAKAGFLD 447
           G  P+V  ++        A  LNEA   F ++   G      + C L    + +K   L 
Sbjct: 36  GSDPHV--FDVFFQVLVEAGLLNEARKFFDKLLNYGVALSAGS-CNLYLTCLSSKRDMLG 92

Query: 448 VAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMI 507
           + + ++ +    G+  +T +Y++++N L + G ++ AH L   M  +GCIP++V+Y  +I
Sbjct: 93  MVLKVFSEFPQLGVCWNTESYNILMNSLFRLGKIREAHHLLMRMEFKGCIPDVVSYTTII 152

Query: 508 ALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWV 567
                    Q  ++L ++MQ  G +P+  TYS ++ +L   G + E E V  EM ++   
Sbjct: 153 DGYCHVGELQKVVQLVKEMQLKGLKPNLYTYSSIILLLCKSGKVVEGEKVLREMMKRGVF 212

Query: 568 PDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHL 627
           PD  +Y  L+D + K GN + A++ +  M    + P+    ++L+      G++ +A  L
Sbjct: 213 PDHVIYTTLIDGFCKLGNTQAAYKLFSEMEAREIVPDSIAFSALICGLSGSGKVVEADKL 272

Query: 628 LQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGFCHELMAVSGHPAHMFLLSMPSPGPDG 687
              M+  G +P   TYT L+    +        F H  M   G   ++   +  + G   
Sbjct: 273 FNEMIKKGFEPDEVTYTALIDGYCKLGEMKKAFFLHNQMVQIGLTPNVVTYTALADGLCK 332

Query: 688 QNVRDHVGSFLEMMHSEDRESKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAV 746
               D     L  M  +  +      + +V+ L K+G   +A  + E   +  ++PD +
Sbjct: 333 SGELDTANELLHEMCRKGLQLNISTYNTIVNGLCKAGNILQAVKLMEEMKEAGLHPDTI 391



 Score = 84.3 bits (207), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 62/250 (24%), Positives = 111/250 (44%), Gaps = 35/250 (14%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           ++AG   D  TYTT++    +  +     +LL +M+  G QP VVT+N L++    +  L
Sbjct: 382 KEAGLHPDTITYTTLMDAYYKTGEMVKARELLREMLDRGLQPTVVTFNVLMNGLCMSGKL 441

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
            +   + K M   G  P+  TY +++  +     + ++ ++Y+ M A G+ PD+ TY+++
Sbjct: 442 EDGERLLKWMLEKGIMPNAATYNSIMKQYCIRNNMRISTEIYRGMCAQGVVPDSNTYNIL 501

Query: 472 INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF 531
           I      GH                               KARN + A  L+++M    F
Sbjct: 502 IK-----GH------------------------------CKARNMKEAWFLHKEMVEKRF 526

Query: 532 EPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWE 591
                +Y+ +++       L EA  +F EMRR+  V    +Y L VD+  + GN+    E
Sbjct: 527 NLTASSYNALIKGFFKRKKLLEARQLFEEMRREGLVASAEIYNLFVDMNYEEGNMETTLE 586

Query: 592 WYEAMLQAGL 601
             +  ++  L
Sbjct: 587 LCDEAIEKCL 596


>gi|219884651|gb|ACL52700.1| unknown [Zea mays]
          Length = 716

 Score =  159 bits (403), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 122/502 (24%), Positives = 220/502 (43%), Gaps = 16/502 (3%)

Query: 354 AGFKHDEHTYTTMVGILGRARQFGAINKLLDQM-VRDGCQPNVVTYNRLIHSYGRANYLN 412
           AG   D  TY+T++    R RQF    +  ++M   DG  P+ VTY+ ++  Y +     
Sbjct: 216 AGVPLDNITYSTLITAARRCRQFAKAVEWFERMYAADGVLPDEVTYSAVLDVYAQLGMKE 275

Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
           E L +F + +  G +PD V +  L  +  +AG  D    ++K+M+  G+ P+ F Y+ ++
Sbjct: 276 EVLALFDRARGSGWKPDHVAFAVLAKMFGEAGDYDGIQFVFKEMREVGIKPNIFVYNALL 335

Query: 473 NCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFE 532
             LGK G    A  LF EM++QG  PN  T   +  +  +AR  + AL+L+  M+     
Sbjct: 336 EALGKTGKPGLARNLFEEMIDQGVEPNARTLTALAKIYGRARWGRDALQLWDKMRELKLP 395

Query: 533 PDKVTYSIVMEVLGHCGYLDEAEAVFAEMR----RKNWVPDEPVYGLLVDLWGKAGNVRK 588
            D +  + ++ +    G + EAE +F EM+    R    PD+  Y  +++++G  G+   
Sbjct: 396 ADSILCNTLLSMCADVGLVAEAEQLFNEMKGPECRDVPKPDKWSYTAMINIYGSNGDTDS 455

Query: 589 AWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
           A + +  ML+ G+ PN+ +   ++    +  ++  A  +L+  L  GLKP  +    LLS
Sbjct: 456 ALQLFAEMLKGGIEPNIMSYTIVIQCLGKARRIQQAVEVLESGLEKGLKPDDRLCGCLLS 515

Query: 649 CCTEARSPYDMGFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLE-MMHSEDRE 707
                      G   E++  S    +  L+ +     D Q   D +   L+ +++S   E
Sbjct: 516 VIA-----LSSGEEMEMVLSSLEKVNQNLVKLIRVLGDAQVGGDDITEELKSVLNSAAPE 570

Query: 708 SKRGLVDAVVDFLHKSGL-KEEAGSVWEVAAQKNVYPDAVKEKGMSYWLINLHVMSDGTA 766
            +R   + ++D     G   + A  V+ +A    +Y   ++ +    W ++L  +S G A
Sbjct: 571 VRRPYCNCLIDVCRNHGFPPQRAREVFHLAQTYGLY-SKLQSRKDEEWSLDLRSLSVGAA 629

Query: 767 VIALSRTLAWFRKQMLISGVGPSRIDIVTGWGRRSRVTGTSLVRQAVQELLHMFSFPFFT 826
             A    +    ++       P    + TG        G +    A    L   + PF  
Sbjct: 630 KTAFDDWMQTVSERWAQQKDLPESFSVYTGSSTHKFAQGLA---SAFAAHLDQMAVPFHA 686

Query: 827 ENGNSGCFVGCGEPLNKWLLQS 848
               +G F+   + L  WL  S
Sbjct: 687 SESQAGSFISSRDDLVSWLQMS 708



 Score =  107 bits (268), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 67/249 (26%), Positives = 117/249 (46%), Gaps = 5/249 (2%)

Query: 333 VLKQLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQ 392
           V  QL      L  F+   R +G+K D   +  +  + G A  +  I  +  +M   G +
Sbjct: 267 VYAQLGMKEEVLALFD-RARGSGWKPDHVAFAVLAKMFGEAGDYDGIQFVFKEMREVGIK 325

Query: 393 PNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDM 452
           PN+  YN L+ + G+      A ++F++M   G EP+  T   L  I+ +A +   A+ +
Sbjct: 326 PNIFVYNALLEALGKTGKPGLARNLFEEMIDQGVEPNARTLTALAKIYGRARWGRDALQL 385

Query: 453 YKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGC----IPNLVTYNIMIA 508
           + KM+   L  D+   + +++     G +  A QLF EM    C     P+  +Y  MI 
Sbjct: 386 WDKMRELKLPADSILCNTLLSMCADVGLVAEAEQLFNEMKGPECRDVPKPDKWSYTAMIN 445

Query: 509 LQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVP 568
           +     +  SAL+L+ +M   G EP+ ++Y+IV++ LG    + +A  V      K   P
Sbjct: 446 IYGSNGDTDSALQLFAEMLKGGIEPNIMSYTIVIQCLGKARRIQQAVEVLESGLEKGLKP 505

Query: 569 DEPVYGLLV 577
           D+ + G L+
Sbjct: 506 DDRLCGCLL 514



 Score =  100 bits (248), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 65/239 (27%), Positives = 117/239 (48%), Gaps = 2/239 (0%)

Query: 418 FKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSP-DTFTYSVIINCLG 476
           F Q Q  G  P       L++    +    +++  + +   AG  P DT  ++V +  L 
Sbjct: 139 FLQQQGQGAAPSPSDALLLLNYLHPSWRKSLSLLAWLRALPAGAFPLDTIFFNVALKSLR 198

Query: 477 KAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNA-GFEPDK 535
            A     A +L  +M++ G   + +TY+ +I    + R +  A++ +  M  A G  PD+
Sbjct: 199 AARQWPHAERLALDMLDAGVPLDNITYSTLITAARRCRQFAKAVEWFERMYAADGVLPDE 258

Query: 536 VTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEA 595
           VTYS V++V    G  +E  A+F   R   W PD   + +L  ++G+AG+       ++ 
Sbjct: 259 VTYSAVLDVYAQLGMKEEVLALFDRARGSGWKPDHVAFAVLAKMFGEAGDYDGIQFVFKE 318

Query: 596 MLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEAR 654
           M + G++PN+   N+LL A  + G+   A +L + M++ G++P+ +T T L      AR
Sbjct: 319 MREVGIKPNIFVYNALLEALGKTGKPGLARNLFEEMIDQGVEPNARTLTALAKIYGRAR 377


>gi|357444525|ref|XP_003592540.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355481588|gb|AES62791.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 507

 Score =  159 bits (403), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 113/410 (27%), Positives = 197/410 (48%), Gaps = 11/410 (2%)

Query: 274 PSREMKIPAGLAPFSRHFASTGNV--VESVSRILRQWKWGPLAEEALGNTNYSMDAYQAN 331
           PSR +K    + PF        N    E++ RIL      P+ + +L N    +      
Sbjct: 34  PSRSLKF--HIFPFHTSLLHKPNNPHAETICRILSTTPESPV-DVSLRNFPVEVSPELVV 90

Query: 332 QVLKQLQDHTV-ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDG 390
            VL +L +  + AL FF W  +Q GF H+   +  ++  LG+ RQF  I  L+D+M +  
Sbjct: 91  AVLNKLSNAGILALSFFRWAEKQQGFNHNTEIFHALIEALGKIRQFKMIWNLVDEMKQRK 150

Query: 391 CQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGF-LDVA 449
              N  T++ +   Y RA  + EAL  F++M+  G +P    +  LID+  K+ F ++ A
Sbjct: 151 LL-NGDTFSLIARRYVRAKVIKEALKTFERMEKYGLKPQISDFNKLIDVLCKSKFHVEKA 209

Query: 450 MDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIAL 509
            +++ KM+   L P+  +Y+++I    +  +L    ++  EM + G  P++VTY I+I  
Sbjct: 210 QELFDKMRQWNLEPNLKSYTILIEGWSQQQNLLKVDEVCREMKDDGFQPDVVTYGIIINA 269

Query: 510 QAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPD 569
             KA+ Y  A+ +Y DM +    P    Y   +  LG+   +DEA   F + +   + P+
Sbjct: 270 YCKAKKYDEAIGIYHDMLSKNVNPSPHIYCTFITGLGNGSRMDEAFEFFEKSKASGFPPE 329

Query: 570 EPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQ 629
            P Y  +V  +  +  +  A+     M + G+ PN  T + +L   ++ G+  +AY + Q
Sbjct: 330 APTYNAVVSAYCWSMRIDDAYRIVGEMKELGIGPNARTYDIILVHLIKGGRTKEAYSVFQ 389

Query: 630 GMLN-LGLKPSLQTYTLLLSC-CTEARSPYDMGFCHELMAVSGHPA-HMF 676
            M +  G +PS+ TY +++   C E +    M   +E+      P  HMF
Sbjct: 390 RMSSETGCEPSVSTYAIMVRMFCNENQLDMAMVVWNEMKDKGILPGIHMF 439



 Score =  114 bits (285), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 70/288 (24%), Positives = 137/288 (47%), Gaps = 1/288 (0%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           RQ   + +  +YT ++    + +    ++++  +M  DG QP+VVTY  +I++Y +A   
Sbjct: 217 RQWNLEPNLKSYTILIEGWSQQQNLLKVDEVCREMKDDGFQPDVVTYGIIINAYCKAKKY 276

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
           +EA+ ++  M      P    YCT I        +D A + ++K +A+G  P+  TY+ +
Sbjct: 277 DEAIGIYHDMLSKNVNPSPHIYCTFITGLGNGSRMDEAFEFFEKSKASGFPPEAPTYNAV 336

Query: 472 INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQN-AG 530
           ++    +  +  A+++  EM   G  PN  TY+I++    K    + A  +++ M +  G
Sbjct: 337 VSAYCWSMRIDDAYRIVGEMKELGIGPNARTYDIILVHLIKGGRTKEAYSVFQRMSSETG 396

Query: 531 FEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAW 590
            EP   TY+I++ +  +   LD A  V+ EM+ K  +P   ++  L+        +  A 
Sbjct: 397 CEPSVSTYAIMVRMFCNENQLDMAMVVWNEMKDKGILPGIHMFSTLIISLCHENKLDDAC 456

Query: 591 EWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKP 638
            +++ ML  G+RP     ++   A +  G  +   H  + +  L   P
Sbjct: 457 RYFQQMLDVGIRPTANMFSAFKRALMAAGMENTVIHFAKKVDKLRNTP 504


>gi|297833172|ref|XP_002884468.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297330308|gb|EFH60727.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 598

 Score =  159 bits (403), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 92/323 (28%), Positives = 152/323 (47%), Gaps = 1/323 (0%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           R   F  D  TY  M+G L    +     K+LDQ++ D CQP V+TY  LI +      +
Sbjct: 181 RSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLDQLLSDNCQPTVITYTILIEATMLEGGV 240

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
           +EAL +  +M   G +PD  TY T+I    K G +D A +M + ++  G  PD  +Y+++
Sbjct: 241 DEALKLLDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMIRNLELKGCEPDVISYNIL 300

Query: 472 INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF 531
           +  L   G  +   +L  +M ++ C PN+VTY+I+I    +    + A+ L + M+  G 
Sbjct: 301 LRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGL 360

Query: 532 EPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWE 591
            PD  +Y  ++      G LD A      M     +PD   Y  ++    K G   +A E
Sbjct: 361 TPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALE 420

Query: 592 WYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSC-C 650
            +  + + G  PN  + N++ SA    G    A H++  M++ G+ P   TY  ++SC C
Sbjct: 421 IFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMVSNGIDPDEITYNSMISCLC 480

Query: 651 TEARSPYDMGFCHELMAVSGHPA 673
            E           ++ +   HP+
Sbjct: 481 REGMVDKAFELLVDMRSCEFHPS 503



 Score =  144 bits (362), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 86/297 (28%), Positives = 148/297 (49%), Gaps = 8/297 (2%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRD----GCQPNVVTYNRLIHSYGRANY 410
           G K D  TY T+  I G  ++ G +++   +M+R+    GC+P+V++YN L+ +      
Sbjct: 254 GLKPDMFTYNTI--IRGMCKE-GMVDRAF-EMIRNLELKGCEPDVISYNILLRALLNQGK 309

Query: 411 LNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSV 470
             E   +  +M    C+P+ VTY  LI    + G ++ AM++ K M+  GL+PD ++Y  
Sbjct: 310 WEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDP 369

Query: 471 IINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAG 530
           +I    + G L  A +    M++ GC+P++V YN ++A   K      AL+++  +   G
Sbjct: 370 LIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVG 429

Query: 531 FEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAW 590
             P+  +Y+ +   L   G    A  +  EM      PDE  Y  ++    + G V KA+
Sbjct: 430 CSPNSSSYNTMFSALWSSGDKIRALHMILEMVSNGIDPDEITYNSMISCLCREGMVDKAF 489

Query: 591 EWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
           E    M      P+V T N +L  F +  ++ DA  +L  M+  G +P+  TYT+L+
Sbjct: 490 ELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAIDVLDSMVGNGCRPNETTYTVLI 546



 Score =  140 bits (352), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 79/290 (27%), Positives = 141/290 (48%)

Query: 359 DEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVF 418
           D   Y  ++    +  +     ++LD+M      P+ VTYN +I S      L+ AL V 
Sbjct: 153 DVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVL 212

Query: 419 KQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKA 478
            Q+    C+P  +TY  LI+     G +D A+ +  +M + GL PD FTY+ II  + K 
Sbjct: 213 DQLLSDNCQPTVITYTILIEATMLEGGVDEALKLLDEMLSRGLKPDMFTYNTIIRGMCKE 272

Query: 479 GHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTY 538
           G +  A ++   +  +GC P++++YNI++        ++   KL   M +   +P+ VTY
Sbjct: 273 GMVDRAFEMIRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTY 332

Query: 539 SIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQ 598
           SI++  L   G ++EA  +   M+ K   PD   Y  L+  + + G +  A E+ E M+ 
Sbjct: 333 SILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMIS 392

Query: 599 AGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
            G  P++   N++L+   + G+   A  +   +  +G  P+  +Y  + S
Sbjct: 393 DGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFS 442



 Score =  134 bits (338), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 77/282 (27%), Positives = 143/282 (50%), Gaps = 1/282 (0%)

Query: 392 QPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMD 451
           QP+V  YN LI+ + + N +++A  V  +M+     PD VTY  +I      G LD+A+ 
Sbjct: 151 QPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALK 210

Query: 452 MYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQA 511
           +  ++ +    P   TY+++I      G +  A +L  EM+++G  P++ TYN +I    
Sbjct: 211 VLDQLLSDNCQPTVITYTILIEATMLEGGVDEALKLLDEMLSRGLKPDMFTYNTIIRGMC 270

Query: 512 KARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEP 571
           K      A ++ R+++  G EPD ++Y+I++  L + G  +E E +  +M  +   P+  
Sbjct: 271 KEGMVDRAFEMIRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVV 330

Query: 572 VYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGM 631
            Y +L+    + G + +A    + M + GL P+  + + L++AF R G+L  A   L+ M
Sbjct: 331 TYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETM 390

Query: 632 LNLGLKPSLQTY-TLLLSCCTEARSPYDMGFCHELMAVSGHP 672
           ++ G  P +  Y T+L + C   ++   +    +L  V   P
Sbjct: 391 ISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSP 432



 Score =  130 bits (327), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 82/311 (26%), Positives = 151/311 (48%), Gaps = 2/311 (0%)

Query: 326 DAYQANQVLKQLQDHTVALGFFNWLR--RQAGFKHDEHTYTTMVGILGRARQFGAINKLL 383
           D +  N +++ +    +    F  +R     G + D  +Y  ++  L    ++    KL+
Sbjct: 258 DMFTYNTIIRGMCKEGMVDRAFEMIRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLM 317

Query: 384 DQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKA 443
            +M  + C PNVVTY+ LI +  R   + EA+++ K M+  G  PD  +Y  LI    + 
Sbjct: 318 TKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCRE 377

Query: 444 GFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTY 503
           G LDVA++  + M + G  PD   Y+ ++  L K G    A ++F ++   GC PN  +Y
Sbjct: 378 GRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSY 437

Query: 504 NIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRR 563
           N M +    + +   AL +  +M + G +PD++TY+ ++  L   G +D+A  +  +MR 
Sbjct: 438 NTMFSALWSSGDKIRALHMILEMVSNGIDPDEITYNSMISCLCREGMVDKAFELLVDMRS 497

Query: 564 KNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSD 623
             + P    Y +++  + KA  +  A +  ++M+  G RPN  T   L+      G  ++
Sbjct: 498 CEFHPSVVTYNIVLLGFCKAHRIEDAIDVLDSMVGNGCRPNETTYTVLIEGIGFAGYRAE 557

Query: 624 AYHLLQGMLNL 634
           A  L   ++ +
Sbjct: 558 AMELANDLVRI 568



 Score =  119 bits (299), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 61/220 (27%), Positives = 118/220 (53%)

Query: 350 LRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRAN 409
           L ++ G   D ++Y  ++    R  +     + L+ M+ DGC P++V YN ++ +  +  
Sbjct: 354 LMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNG 413

Query: 410 YLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYS 469
             ++AL++F ++  VGC P+  +Y T+      +G    A+ M  +M + G+ PD  TY+
Sbjct: 414 KADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMVSNGIDPDEITYN 473

Query: 470 VIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNA 529
            +I+CL + G +  A +L  +M +    P++VTYNI++    KA   + A+ +   M   
Sbjct: 474 SMISCLCREGMVDKAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAIDVLDSMVGN 533

Query: 530 GFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPD 569
           G  P++ TY++++E +G  GY  EA  +  ++ R N + +
Sbjct: 534 GCRPNETTYTVLIEGIGFAGYRAEAMELANDLVRINAISE 573



 Score = 45.1 bits (105), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 32/137 (23%), Positives = 62/137 (45%), Gaps = 1/137 (0%)

Query: 511 AKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDE 570
            ++ NY  +L L   M   G+ PD +  + +++       + +A  V  E+  K   PD 
Sbjct: 96  CRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNVPKAVRVM-EILEKFGQPDV 154

Query: 571 PVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQG 630
             Y  L++ + K   +  A    + M      P+  T N ++ +    G+L  A  +L  
Sbjct: 155 FAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLDQ 214

Query: 631 MLNLGLKPSLQTYTLLL 647
           +L+   +P++ TYT+L+
Sbjct: 215 LLSDNCQPTVITYTILI 231


>gi|78708657|gb|ABB47632.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica Group]
          Length = 1080

 Score =  159 bits (403), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 104/363 (28%), Positives = 180/363 (49%), Gaps = 9/363 (2%)

Query: 284  LAPFSRHFASTGNVVESVSRILRQWKWGPLAEEALGNTNYSMDAYQANQVLKQLQDHTVA 343
            L P  +H       +E+   + +   +G   +  L N+           V + L D  +A
Sbjct: 723  LCPLIKHLCKQKKALEAHELVKKFKSFGVSLKTGLYNS------LICGLVDENLID--IA 774

Query: 344  LGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIH 403
             G F  ++ + G   DE TY  ++  +G++ +   + K+ ++M R G +   VTYN +I 
Sbjct: 775  EGLFAEMK-ELGCGPDEFTYNLLLDAMGKSMRIEEMLKVQEEMHRKGYESTYVTYNTIIS 833

Query: 404  SYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSP 463
               ++  L +A+D++  +   G  P   TY  L+D   KAG ++ A +++ +M   G   
Sbjct: 834  GLVKSRRLEQAIDLYYNLMSQGFSPTPCTYGPLLDGLLKAGRIEDAENLFNEMLEYGCKA 893

Query: 464  DTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLY 523
            +   Y++++N    AG+ +    LF +MV+QG  P++ +Y I+I    KA      L  +
Sbjct: 894  NCTIYNILLNGHRIAGNTEKVCHLFQDMVDQGINPDIKSYTIIIDTLCKAGQLNDGLTYF 953

Query: 524  RDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKA 583
            R +   G EPD +TY+++++ LG    L+EA ++F EM++K  VP+   Y  L+   GKA
Sbjct: 954  RQLLEMGLEPDLITYNLLIDGLGKSKRLEEAVSLFNEMQKKGIVPNLYTYNSLILHLGKA 1013

Query: 584  GNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTY 643
            G   +A + YE +L  G +PNV T N+L+  +   G    AY     M+  G  P+  TY
Sbjct: 1014 GKAAEAGKMYEELLTKGWKPNVFTYNALIRGYSVSGSTDSAYAAYGRMIVGGCLPNSSTY 1073

Query: 644  TLL 646
              L
Sbjct: 1074 MQL 1076



 Score =  156 bits (394), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 96/334 (28%), Positives = 166/334 (49%), Gaps = 2/334 (0%)

Query: 316  EALGNTNYSMDAYQANQVLKQLQDHTVALGFFNWLRRQAGFKHDEHT--YTTMVGILGRA 373
            E + ++  ++D +    ++K L     AL     +++   F     T  Y +++  L   
Sbjct: 709  EIIASSGITLDDFFLCPLIKHLCKQKKALEAHELVKKFKSFGVSLKTGLYNSLICGLVDE 768

Query: 374  RQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTY 433
                    L  +M   GC P+  TYN L+ + G++  + E L V ++M   G E   VTY
Sbjct: 769  NLIDIAEGLFAEMKELGCGPDEFTYNLLLDAMGKSMRIEEMLKVQEEMHRKGYESTYVTY 828

Query: 434  CTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVN 493
             T+I    K+  L+ A+D+Y  + + G SP   TY  +++ L KAG ++ A  LF EM+ 
Sbjct: 829  NTIISGLVKSRRLEQAIDLYYNLMSQGFSPTPCTYGPLLDGLLKAGRIEDAENLFNEMLE 888

Query: 494  QGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDE 553
             GC  N   YNI++     A N +    L++DM + G  PD  +Y+I+++ L   G L++
Sbjct: 889  YGCKANCTIYNILLNGHRIAGNTEKVCHLFQDMVDQGINPDIKSYTIIIDTLCKAGQLND 948

Query: 554  AEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLS 613
                F ++      PD   Y LL+D  GK+  + +A   +  M + G+ PN+ T NSL+ 
Sbjct: 949  GLTYFRQLLEMGLEPDLITYNLLIDGLGKSKRLEEAVSLFNEMQKKGIVPNLYTYNSLIL 1008

Query: 614  AFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
               + G+ ++A  + + +L  G KP++ TY  L+
Sbjct: 1009 HLGKAGKAAEAGKMYEELLTKGWKPNVFTYNALI 1042



 Score =  149 bits (377), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 87/301 (28%), Positives = 155/301 (51%)

Query: 349 WLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRA 408
           W  +++  K D  TY T++   G      ++ ++ + M  DG   NVV Y  +I +  + 
Sbjct: 289 WKMKKSDQKPDRVTYITLLDKFGDNGDSQSVMEIWNAMKADGYNDNVVAYTAVIDALCQV 348

Query: 409 NYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTY 468
             + EAL++F +M+  G  P++ +Y +LI    KA     A++++K M   G  P+ +T+
Sbjct: 349 GRVFEALEMFDEMKQKGIVPEQYSYNSLISGFLKADRFGDALELFKHMDIHGPKPNGYTH 408

Query: 469 SVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQN 528
            + IN  GK+G    A Q +  M ++G +P++V  N ++   AK+     A +++ +++ 
Sbjct: 409 VLFINYYGKSGESIKAIQRYELMKSKGIVPDVVAGNAVLFGLAKSGRLGMAKRVFHELKA 468

Query: 529 AGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRK 588
            G  PD +TY+++++        DEA  +F +M   N VPD      L+D   KAG   +
Sbjct: 469 MGVSPDTITYTMMIKCCSKASKFDEAVKIFYDMIENNCVPDVLAVNSLIDTLYKAGRGDE 528

Query: 589 AWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
           AW  +  + +  L P   T N+LL+   R G++ +  HLL+ M +    P+L TY  +L 
Sbjct: 529 AWRIFYQLKEMNLEPTDGTYNTLLAGLGREGKVKEVMHLLEEMYHSNYPPNLITYNTILD 588

Query: 649 C 649
           C
Sbjct: 589 C 589



 Score =  149 bits (375), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 89/313 (28%), Positives = 159/313 (50%), Gaps = 39/313 (12%)

Query: 349 WLRRQA---GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSY 405
           WL R+    G K + ++YT  + +LG+A++F    ++L +M  +GC+P+V+T+  LI   
Sbjct: 216 WLLREMEAHGVKPNVYSYTICIRVLGQAKRFDEAYRILAKMENEGCKPDVITHTVLIQVL 275

Query: 406 GRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDT 465
             A  +++A DVF +M+    +PDRVTY TL+D     G     M+++  M+A G + + 
Sbjct: 276 CDAGRISDAKDVFWKMKKSDQKPDRVTYITLLDKFGDNGDSQSVMEIWNAMKADGYNDNV 335

Query: 466 FTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRD 525
             Y+ +I+ L + G +  A ++F EM  +G +P   +YN +I+   KA  +  AL+L++ 
Sbjct: 336 VAYTAVIDALCQVGRVFEALEMFDEMKQKGIVPEQYSYNSLISGFLKADRFGDALELFKH 395

Query: 526 MQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGN 585
           M   G +P+  T+                                    L ++ +GK+G 
Sbjct: 396 MDIHGPKPNGYTHV-----------------------------------LFINYYGKSGE 420

Query: 586 VRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTL 645
             KA + YE M   G+ P+V   N++L    + G+L  A  +   +  +G+ P   TYT+
Sbjct: 421 SIKAIQRYELMKSKGIVPDVVAGNAVLFGLAKSGRLGMAKRVFHELKAMGVSPDTITYTM 480

Query: 646 LLSCCTEARSPYD 658
           ++ CC++A S +D
Sbjct: 481 MIKCCSKA-SKFD 492



 Score =  145 bits (366), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 86/302 (28%), Positives = 155/302 (51%), Gaps = 3/302 (0%)

Query: 355 GFKHDEHTYTTMVGILGR-ARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNE 413
           G+  +   YT ++  L +  R F A+ ++ D+M + G  P   +YN LI  + +A+   +
Sbjct: 330 GYNDNVVAYTAVIDALCQVGRVFEAL-EMFDEMKQKGIVPEQYSYNSLISGFLKADRFGD 388

Query: 414 ALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIIN 473
           AL++FK M + G +P+  T+   I+ + K+G    A+  Y+ M++ G+ PD    + ++ 
Sbjct: 389 ALELFKHMDIHGPKPNGYTHVLFINYYGKSGESIKAIQRYELMKSKGIVPDVVAGNAVLF 448

Query: 474 CLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEP 533
            L K+G L  A ++F E+   G  P+ +TY +MI   +KA  +  A+K++ DM      P
Sbjct: 449 GLAKSGRLGMAKRVFHELKAMGVSPDTITYTMMIKCCSKASKFDEAVKIFYDMIENNCVP 508

Query: 534 DKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWY 593
           D +  + +++ L   G  DEA  +F +++  N  P +  Y  L+   G+ G V++     
Sbjct: 509 DVLAVNSLIDTLYKAGRGDEAWRIFYQLKEMNLEPTDGTYNTLLAGLGREGKVKEVMHLL 568

Query: 594 EAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTY-TLLLSCCTE 652
           E M  +   PN+ T N++L    + G ++DA  +L  M   G  P L +Y T++     E
Sbjct: 569 EEMYHSNYPPNLITYNTILDCLCKNGAVNDALDMLYSMTTKGCIPDLSSYNTVIYGLVKE 628

Query: 653 AR 654
            R
Sbjct: 629 ER 630



 Score =  135 bits (340), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 81/302 (26%), Positives = 153/302 (50%), Gaps = 1/302 (0%)

Query: 347 FNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYG 406
           F+ ++RQ   K +  T+  + G LG      +    L  M   G   N  TYN L++   
Sbjct: 113 FDVMQRQI-VKANVGTFAAIFGGLGVEGGLRSAPVALPVMKEAGIVLNAYTYNGLVYFLV 171

Query: 407 RANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTF 466
           ++ +  EAL+V++ M V G  P   TY  L+    K   ++  + + ++M+A G+ P+ +
Sbjct: 172 KSGFDREALEVYRVMMVDGVVPSVRTYSVLMVAFGKRRDVETVLWLLREMEAHGVKPNVY 231

Query: 467 TYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDM 526
           +Y++ I  LG+A     A+++  +M N+GC P+++T+ ++I +   A     A  ++  M
Sbjct: 232 SYTICIRVLGQAKRFDEAYRILAKMENEGCKPDVITHTVLIQVLCDAGRISDAKDVFWKM 291

Query: 527 QNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNV 586
           + +  +PD+VTY  +++  G  G       ++  M+   +  +   Y  ++D   + G V
Sbjct: 292 KKSDQKPDRVTYITLLDKFGDNGDSQSVMEIWNAMKADGYNDNVVAYTAVIDALCQVGRV 351

Query: 587 RKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLL 646
            +A E ++ M Q G+ P   + NSL+S FL+  +  DA  L + M   G KP+  T+ L 
Sbjct: 352 FEALEMFDEMKQKGIVPEQYSYNSLISGFLKADRFGDALELFKHMDIHGPKPNGYTHVLF 411

Query: 647 LS 648
           ++
Sbjct: 412 IN 413



 Score =  129 bits (325), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 79/305 (25%), Positives = 155/305 (50%), Gaps = 2/305 (0%)

Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLI 402
           AL  F+ ++ Q G   ++++Y +++    +A +FG   +L   M   G +PN  T+   I
Sbjct: 354 ALEMFDEMK-QKGIVPEQYSYNSLISGFLKADRFGDALELFKHMDIHGPKPNGYTHVLFI 412

Query: 403 HSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLS 462
           + YG++    +A+  ++ M+  G  PD V    ++   AK+G L +A  ++ +++A G+S
Sbjct: 413 NYYGKSGESIKAIQRYELMKSKGIVPDVVAGNAVLFGLAKSGRLGMAKRVFHELKAMGVS 472

Query: 463 PDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKL 522
           PDT TY+++I C  KA     A ++F +M+   C+P+++  N +I    KA     A ++
Sbjct: 473 PDTITYTMMIKCCSKASKFDEAVKIFYDMIENNCVPDVLAVNSLIDTLYKAGRGDEAWRI 532

Query: 523 YRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGK 582
           +  ++    EP   TY+ ++  LG  G + E   +  EM   N+ P+   Y  ++D   K
Sbjct: 533 FYQLKEMNLEPTDGTYNTLLAGLGREGKVKEVMHLLEEMYHSNYPPNLITYNTILDCLCK 592

Query: 583 AGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQT 642
            G V  A +   +M   G  P++ + N+++   ++  + ++A+ +   M  + L P   T
Sbjct: 593 NGAVNDALDMLYSMTTKGCIPDLSSYNTVIYGLVKEERYNEAFSIFCQMKKV-LIPDYAT 651

Query: 643 YTLLL 647
              +L
Sbjct: 652 LCTIL 656



 Score =  129 bits (324), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 106/416 (25%), Positives = 184/416 (44%), Gaps = 24/416 (5%)

Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLI 402
           AL  F    R+    H   +   M+ ++    + G + ++ D M R   + NV T+  + 
Sbjct: 73  ALERFRSAARKPRVAHTTASCNYMLELMRGHGRVGDMAEVFDVMQRQIVKANVGTFAAIF 132

Query: 403 HSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLS 462
              G    L  A      M+  G   +  TY  L+    K+GF   A+++Y+ M   G+ 
Sbjct: 133 GGLGVEGGLRSAPVALPVMKEAGIVLNAYTYNGLVYFLVKSGFDREALEVYRVMMVDGVV 192

Query: 463 PDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKL 522
           P   TYSV++   GK   ++    L  EM   G  PN+ +Y I I +  +A+ +  A ++
Sbjct: 193 PSVRTYSVLMVAFGKRRDVETVLWLLREMEAHGVKPNVYSYTICIRVLGQAKRFDEAYRI 252

Query: 523 YRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGK 582
              M+N G +PD +T++++++VL   G + +A+ VF +M++ +  PD   Y  L+D +G 
Sbjct: 253 LAKMENEGCKPDVITHTVLIQVLCDAGRISDAKDVFWKMKKSDQKPDRVTYITLLDKFGD 312

Query: 583 AGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQT 642
            G+ +   E + AM   G   NV    +++ A  +VG++ +A  +   M   G+ P   +
Sbjct: 313 NGDSQSVMEIWNAMKADGYNDNVVAYTAVIDALCQVGRVFEALEMFDEMKQKGIVPEQYS 372

Query: 643 YTLLLSCCTEARSPYDMGFCHELMAVSGHPAHMFLLSMPSPGPDGQ------NVRDHVGS 696
           Y  L+S   +A      G   EL        HM    +  P P+G       N     G 
Sbjct: 373 YNSLISGFLKADR---FGDALELF------KHM---DIHGPKPNGYTHVLFINYYGKSGE 420

Query: 697 FLEMMHSEDRESKRGLV------DAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAV 746
            ++ +   +    +G+V      +AV+  L KSG    A  V+       V PD +
Sbjct: 421 SIKAIQRYELMKSKGIVPDVVAGNAVLFGLAKSGRLGMAKRVFHELKAMGVSPDTI 476



 Score =  110 bits (275), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 92/394 (23%), Positives = 175/394 (44%), Gaps = 18/394 (4%)

Query: 363  YTTMVGILGRARQFG----AINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVF 418
            Y T+  IL    + G    A++ + D  ++ G + +  + + L+    +   + ++++  
Sbjct: 649  YATLCTILPSFVKIGLMKEALHIIKDYFLQPGSKTDRSSCHSLMEGILKKAGIEKSIEFA 708

Query: 419  KQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKA 478
            + +   G   D    C LI    K      A ++ KK ++ G+S  T  Y+ +I  L   
Sbjct: 709  EIIASSGITLDDFFLCPLIKHLCKQKKALEAHELVKKFKSFGVSLKTGLYNSLICGLVDE 768

Query: 479  GHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTY 538
              +  A  LF EM   GC P+  TYN+++    K+   +  LK+  +M   G+E   VTY
Sbjct: 769  NLIDIAEGLFAEMKELGCGPDEFTYNLLLDAMGKSMRIEEMLKVQEEMHRKGYESTYVTY 828

Query: 539  SIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQ 598
            + ++  L     L++A  ++  +  + + P    YG L+D   KAG +  A   +  ML+
Sbjct: 829  NTIISGLVKSRRLEQAIDLYYNLMSQGFSPTPCTYGPLLDGLLKAGRIEDAENLFNEMLE 888

Query: 599  AGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYD 658
             G + N    N LL+     G      HL Q M++ G+ P +++YT+++    +A    D
Sbjct: 889  YGCKANCTIYNILLNGHRIAGNTEKVCHLFQDMVDQGINPDIKSYTIIIDTLCKAGQLND 948

Query: 659  -MGFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRESKRGLV---- 713
             + +  +L+ +   P  +    +       + + + V  F EM        K+G+V    
Sbjct: 949  GLTYFRQLLEMGLEPDLITYNLLIDGLGKSKRLEEAVSLFNEM-------QKKGIVPNLY 1001

Query: 714  --DAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDA 745
              ++++  L K+G   EAG ++E    K   P+ 
Sbjct: 1002 TYNSLILHLGKAGKAAEAGKMYEELLTKGWKPNV 1035



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 43/140 (30%), Positives = 71/140 (50%), Gaps = 4/140 (2%)

Query: 336  QLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNV 395
            QL D    L +F  L  + G + D  TY  ++  LG++++      L ++M + G  PN+
Sbjct: 945  QLND---GLTYFRQLL-EMGLEPDLITYNLLIDGLGKSKRLEEAVSLFNEMQKKGIVPNL 1000

Query: 396  VTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKK 455
             TYN LI   G+A    EA  +++++   G +P+  TY  LI  ++ +G  D A   Y +
Sbjct: 1001 YTYNSLILHLGKAGKAAEAGKMYEELLTKGWKPNVFTYNALIRGYSVSGSTDSAYAAYGR 1060

Query: 456  MQAAGLSPDTFTYSVIINCL 475
            M   G  P++ TY  + N L
Sbjct: 1061 MIVGGCLPNSSTYMQLPNQL 1080


>gi|356540349|ref|XP_003538652.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
           mitochondrial-like [Glycine max]
          Length = 1024

 Score =  159 bits (403), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 94/317 (29%), Positives = 157/317 (49%), Gaps = 17/317 (5%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           ++ G     +TYT ++    +A          D+M+RD C PNVVTY  LIH+Y +A  +
Sbjct: 480 KKNGIVPSVYTYTILIDSFCKAGLIQQARNWFDEMLRDNCTPNVVTYTSLIHAYLKARKV 539

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLS--------- 462
            +A  +F+ M + G +P+ VTY  LID H KAG +D A  +Y +MQ    S         
Sbjct: 540 FDANKLFEMMLLEGSKPNVVTYTALIDGHCKAGQIDKACQIYARMQGDIESSDIDMYFKL 599

Query: 463 -------PDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARN 515
                  P+  TY  +++ L KA  ++ AH+L   M   GC PN + Y+ +I    K   
Sbjct: 600 DDNDCETPNIITYGALVDGLCKANRVEEAHELLDTMSVNGCEPNQIVYDALIDGFCKTGK 659

Query: 516 YQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGL 575
            ++A +++  M   G+ P+  TYS ++  L     LD    V ++M   +  P+  +Y  
Sbjct: 660 LENAQEVFVKMSERGYCPNLYTYSSLINSLFKEKRLDLVLKVLSKMLENSCTPNVVIYTD 719

Query: 576 LVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLG 635
           ++D   K G   +A+     M + G  PNV T  +++  F ++G++     L + M + G
Sbjct: 720 MIDGLCKVGKTEEAYRLMLKMEEVGCYPNVITYTAMIDGFGKIGKIEQCLELYRDMCSKG 779

Query: 636 LKPSLQTYTLLLS-CCT 651
             P+  TY +L++ CC+
Sbjct: 780 CAPNFITYRVLINHCCS 796



 Score =  145 bits (365), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 115/419 (27%), Positives = 184/419 (43%), Gaps = 26/419 (6%)

Query: 350 LRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRAN 409
           L  +  F  D   Y  MV  L  A  F     +LD+M    C PNVVTY  L+       
Sbjct: 262 LLEKEEFVPDTVFYNRMVSGLCEASLFQEAMDILDRMRSISCIPNVVTYRILLSGCLGKG 321

Query: 410 YLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYS 469
            L     +   M   GC P+R  + +L+  + K+     A  ++KKM   G  P    Y+
Sbjct: 322 QLGRCKRILSMMMTEGCYPNREMFNSLVHAYCKSRDYSYAYKLFKKMIKCGCQPGYLLYN 381

Query: 470 VIIN--C----LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLY 523
           + I   C    L  +  L+ A + + EM++ G + N V  +        A  +  A ++ 
Sbjct: 382 IFIGSICSNEELPGSDLLELAEKAYSEMLDLGVVLNKVNVSNFARCLCGAGKFDKAFEII 441

Query: 524 RDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKA 583
            +M + GF PD  TYS V+  L     +++A  +F EM++   VP    Y +L+D + KA
Sbjct: 442 CEMMSKGFVPDDSTYSKVIGFLCDASKVEKAFLLFEEMKKNGIVPSVYTYTILIDSFCKA 501

Query: 584 GNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTY 643
           G +++A  W++ ML+    PNV T  SL+ A+L+  ++ DA  L + ML  G KP++ TY
Sbjct: 502 GLIQQARNWFDEMLRDNCTPNVVTYTSLIHAYLKARKVFDANKLFEMMLLEGSKPNVVTY 561

Query: 644 TLLL-----------SCCTEAR-------SPYDMGFCHELMAVSGHPAHMFLLSMPSPGP 685
           T L+           +C   AR       S  DM F  +L        ++        G 
Sbjct: 562 TALIDGHCKAGQIDKACQIYARMQGDIESSDIDMYF--KLDDNDCETPNIITYGALVDGL 619

Query: 686 DGQNVRDHVGSFLEMMHSEDRESKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPD 744
              N  +     L+ M     E  + + DA++D   K+G  E A  V+   +++   P+
Sbjct: 620 CKANRVEEAHELLDTMSVNGCEPNQIVYDALIDGFCKTGKLENAQEVFVKMSERGYCPN 678



 Score =  138 bits (347), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 91/324 (28%), Positives = 150/324 (46%), Gaps = 41/324 (12%)

Query: 362 TYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQM 421
           TY  +V  L +A +    ++LLD M  +GC+PN + Y+ LI  + +   L  A +VF +M
Sbjct: 611 TYGALVDGLCKANRVEEAHELLDTMSVNGCEPNQIVYDALIDGFCKTGKLENAQEVFVKM 670

Query: 422 QVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHL 481
              G  P+  TY +LI+   K   LD+ + +  KM     +P+   Y+ +I+ L K G  
Sbjct: 671 SERGYCPNLYTYSSLINSLFKEKRLDLVLKVLSKMLENSCTPNVVIYTDMIDGLCKVGKT 730

Query: 482 QAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIV 541
           + A++L  +M   GC PN++TY  MI    K    +  L+LYRDM + G  P+ +TY ++
Sbjct: 731 EEAYRLMLKMEEVGCYPNVITYTAMIDGFGKIGKIEQCLELYRDMCSKGCAPNFITYRVL 790

Query: 542 MEVLGHCGYLDEAEAVFAEMRRKNW---------------------------------VP 568
           +      G LDEA  +  EM++  W                                 VP
Sbjct: 791 INHCCSTGLLDEAHRLLDEMKQTYWPRHISSYRKIIEGFNREFITSIGLLDELSENESVP 850

Query: 569 DEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCN-----SLLSAFLRVGQLSD 623
            E +Y +L+D + KAG +  A    E +  +   P++   N     SL+ +     ++  
Sbjct: 851 VESLYRILIDNFIKAGRLEGALNLLEEISSS---PSLAVANKYLYTSLIESLSHASKVDK 907

Query: 624 AYHLLQGMLNLGLKPSLQTYTLLL 647
           A+ L   M+N  + P L T+  L+
Sbjct: 908 AFELYASMINKNVVPELSTFVHLI 931



 Score =  137 bits (345), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 86/311 (27%), Positives = 150/311 (48%), Gaps = 20/311 (6%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           GF  D+ TY+ ++G L  A +      L ++M ++G  P+V TY  LI S+ +A  + +A
Sbjct: 448 GFVPDDSTYSKVIGFLCDASKVEKAFLLFEEMKKNGIVPSVYTYTILIDSFCKAGLIQQA 507

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
            + F +M    C P+ VTY +LI  + KA  +  A  +++ M   G  P+  TY+ +I+ 
Sbjct: 508 RNWFDEMLRDNCTPNVVTYTSLIHAYLKARKVFDANKLFEMMLLEGSKPNVVTYTALIDG 567

Query: 475 LGKAGHLQAAHQLFCEMVNQGCI------------------PNLVTYNIMIALQAKARNY 516
             KAG +  A Q++  M  QG I                  PN++TY  ++    KA   
Sbjct: 568 HCKAGQIDKACQIYARM--QGDIESSDIDMYFKLDDNDCETPNIITYGALVDGLCKANRV 625

Query: 517 QSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLL 576
           + A +L   M   G EP+++ Y  +++     G L+ A+ VF +M  + + P+   Y  L
Sbjct: 626 EEAHELLDTMSVNGCEPNQIVYDALIDGFCKTGKLENAQEVFVKMSERGYCPNLYTYSSL 685

Query: 577 VDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGL 636
           ++   K   +    +    ML+    PNV     ++    +VG+  +AY L+  M  +G 
Sbjct: 686 INSLFKEKRLDLVLKVLSKMLENSCTPNVVIYTDMIDGLCKVGKTEEAYRLMLKMEEVGC 745

Query: 637 KPSLQTYTLLL 647
            P++ TYT ++
Sbjct: 746 YPNVITYTAMI 756



 Score =  127 bits (319), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 88/323 (27%), Positives = 146/323 (45%), Gaps = 9/323 (2%)

Query: 354 AGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNE 413
           +GF+ D  T       L +A + G    LL+   ++   P+ V YNR++     A+   E
Sbjct: 234 SGFRMDGCTLGCFAYSLCKAGRCGDALSLLE---KEEFVPDTVFYNRMVSGLCEASLFQE 290

Query: 414 ALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIIN 473
           A+D+  +M+ + C P+ VTY  L+      G L     +   M   G  P+   ++ +++
Sbjct: 291 AMDILDRMRSISCIPNVVTYRILLSGCLGKGQLGRCKRILSMMMTEGCYPNREMFNSLVH 350

Query: 474 CLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNY------QSALKLYRDMQ 527
              K+     A++LF +M+  GC P  + YNI I               + A K Y +M 
Sbjct: 351 AYCKSRDYSYAYKLFKKMIKCGCQPGYLLYNIFIGSICSNEELPGSDLLELAEKAYSEML 410

Query: 528 NAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVR 587
           + G   +KV  S     L   G  D+A  +  EM  K +VPD+  Y  ++     A  V 
Sbjct: 411 DLGVVLNKVNVSNFARCLCGAGKFDKAFEIICEMMSKGFVPDDSTYSKVIGFLCDASKVE 470

Query: 588 KAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
           KA+  +E M + G+ P+V T   L+ +F + G +  A +    ML     P++ TYT L+
Sbjct: 471 KAFLLFEEMKKNGIVPSVYTYTILIDSFCKAGLIQQARNWFDEMLRDNCTPNVVTYTSLI 530

Query: 648 SCCTEARSPYDMGFCHELMAVSG 670
               +AR  +D     E+M + G
Sbjct: 531 HAYLKARKVFDANKLFEMMLLEG 553



 Score =  117 bits (292), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 72/277 (25%), Positives = 138/277 (49%), Gaps = 4/277 (1%)

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
           + G+  + +TY++++  L + ++   + K+L +M+ + C PNVV Y  +I    +     
Sbjct: 672 ERGYCPNLYTYSSLINSLFKEKRLDLVLKVLSKMLENSCTPNVVIYTDMIDGLCKVGKTE 731

Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
           EA  +  +M+ VGC P+ +TY  +ID   K G ++  +++Y+ M + G +P+  TY V+I
Sbjct: 732 EAYRLMLKMEEVGCYPNVITYTAMIDGFGKIGKIEQCLELYRDMCSKGCAPNFITYRVLI 791

Query: 473 NCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFE 532
           N     G L  AH+L  EM       ++ +Y  +I  +   R + +++ L  ++      
Sbjct: 792 NHCCSTGLLDEAHRLLDEMKQTYWPRHISSYRKII--EGFNREFITSIGLLDELSENESV 849

Query: 533 PDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKN--WVPDEPVYGLLVDLWGKAGNVRKAW 590
           P +  Y I+++     G L+ A  +  E+       V ++ +Y  L++    A  V KA+
Sbjct: 850 PVESLYRILIDNFIKAGRLEGALNLLEEISSSPSLAVANKYLYTSLIESLSHASKVDKAF 909

Query: 591 EWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHL 627
           E Y +M+   + P + T   L+    RVG+  +A  L
Sbjct: 910 ELYASMINKNVVPELSTFVHLIKGLTRVGKWQEALQL 946



 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 49/194 (25%), Positives = 85/194 (43%), Gaps = 12/194 (6%)

Query: 502 TYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEM 561
           TYN +I +  +A    +A  ++R+M N+GF  D  T       L   G   +A ++   +
Sbjct: 207 TYNALIQVFLRADKLDTAFLVHREMSNSGFRMDGCTLGCFAYSLCKAGRCGDALSL---L 263

Query: 562 RRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQL 621
            ++ +VPD   Y  +V    +A   ++A +  + M      PNV T   LLS  L  GQL
Sbjct: 264 EKEEFVPDTVFYNRMVSGLCEASLFQEAMDILDRMRSISCIPNVVTYRILLSGCLGKGQL 323

Query: 622 SDAYHLLQGMLNLGLKPSLQTY-TLLLSCCTEARSPYDMGFCHELMAVSGHPAHM----F 676
                +L  M+  G  P+ + + +L+ + C      Y      +++     P ++    F
Sbjct: 324 GRCKRILSMMMTEGCYPNREMFNSLVHAYCKSRDYSYAYKLFKKMIKCGCQPGYLLYNIF 383

Query: 677 LLSMPS----PGPD 686
           + S+ S    PG D
Sbjct: 384 IGSICSNEELPGSD 397


>gi|108711050|gb|ABF98845.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
 gi|215693326|dbj|BAG88708.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|222625789|gb|EEE59921.1| hypothetical protein OsJ_12549 [Oryza sativa Japonica Group]
          Length = 554

 Score =  159 bits (403), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 119/433 (27%), Positives = 202/433 (46%), Gaps = 7/433 (1%)

Query: 298 VESVSRILRQWKWGPLAEE-ALGNTNYSMDAYQANQVLKQL-QDHTVALGFFNWLRRQAG 355
           ++ VSRIL      P A   A+   +  +     +++L +   D   A GFF W+  Q G
Sbjct: 102 IDEVSRILSARFASPEAIMIAMDCCSVRVTGCLVDKILTRFSNDWVAAFGFFMWVGTQGG 161

Query: 356 FKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEAL 415
           + H   +Y  MV ILG+ +QF  +  L++QMV  G   +++T  +++     A+   EA+
Sbjct: 162 YCHCADSYDLMVDILGKFKQFDLMWGLINQMVEVGGLMSLMTMTKVMRRLAGASRWTEAI 221

Query: 416 DVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCL 475
           D F +M   G   D      L+D   K   +  A  ++++++   + PD  +++ +++  
Sbjct: 222 DAFHKMDRFGVVKDTKAMNVLLDTLCKERSVKRARGVFQELRGT-IPPDENSFNTLVHGW 280

Query: 476 GKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDK 535
            KA  L+ A     EM   G  P++VTY  ++      +++Q+   L  +M+     P+ 
Sbjct: 281 CKARMLKEALDTMEEMKQHGFSPSVVTYTSLVEAYCMEKDFQTVYALLDEMRKRRCPPNV 340

Query: 536 VTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEA 595
           VTY+I+M  LG  G   EA   F +++     PD   Y  L+ + G+AG +  A+   E 
Sbjct: 341 VTYTILMHALGKAGRTREALDTFDKLKEDGVAPDASFYNSLIYILGRAGRLEDAYSVVEE 400

Query: 596 MLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARS 655
           M   G+ PNV T N+L+SA     Q  +A  LL  M      P ++TYT LL  C + + 
Sbjct: 401 MRTTGIAPNVTTFNTLISAACDHSQAENALKLLVKMEEQSCNPDIKTYTPLLKLCCKRQW 460

Query: 656 PYDMGF--CHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRESKRGLV 713
              + F  CH            + L +     +G+  +  +  FLE M S+    K+   
Sbjct: 461 VKILLFLVCHMFRKDISPDFSTYTLLVSWLCRNGKVAQSCL--FLEEMVSKGFAPKQETF 518

Query: 714 DAVVDFLHKSGLK 726
           D V++ L K  L+
Sbjct: 519 DLVMEKLEKRNLQ 531


>gi|449442128|ref|XP_004138834.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22670,
           mitochondrial-like [Cucumis sativus]
          Length = 591

 Score =  159 bits (403), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 98/357 (27%), Positives = 182/357 (50%), Gaps = 3/357 (0%)

Query: 293 STGNVVESVSRILRQWKWGPL-AEEALGNTNYSMDAYQANQVLKQLQ-DHTVALGFFNWL 350
           +  N V+ +S +L      P    EAL    Y +      Q+LK+   D   A G F W 
Sbjct: 138 TCNNEVDKISTMLENRYPSPENVAEALNGKAYRVSNTLVAQLLKRFHNDWIQAYGIFKWA 197

Query: 351 RRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANY 410
           + Q  ++H   +Y +MV ILG+A+ F  + +L+D+M       ++ T +++I    RA  
Sbjct: 198 KDQIPYRHSPESYNSMVDILGKAKNFRLMWELVDEMNHLAGSVSLETMSKVIRRLARAGR 257

Query: 411 LNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSV 470
             EA+  F+ ++  G   D      L+D   K   ++ A +++++++ + +  +  +++V
Sbjct: 258 HQEAIHAFRNIEKYGISTDTTAMNVLMDALVKEASVEDAHNVFRELKCS-IPFNLASFNV 316

Query: 471 IINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAG 530
           +I+   KA  L  A ++  E+   G  P++++Y   I    + +++++  K+   M++ G
Sbjct: 317 LIHGYCKAKKLDEAWKIMGEVEKSGLEPDVISYTAFIEAHCREKDFRNVDKVLVQMEHKG 376

Query: 531 FEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAW 590
            +P+ +T++I+M  LG    ++EA  V+ +M+++  VPD   Y  L+ + GKAG +    
Sbjct: 377 CKPNVITFTIIMHALGKAKQINEALKVYEKMKKEGCVPDSSFYSSLIFILGKAGRLTDVK 436

Query: 591 EWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
           E  E M + G+ P+V T N+L+S      Q   A  LL  M  +  KP L+TY  LL
Sbjct: 437 EIVEDMEKQGVTPDVLTYNTLISCACAHSQEETALTLLLKMEEVSCKPDLKTYHPLL 493



 Score =  128 bits (322), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 69/225 (30%), Positives = 118/225 (52%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
            ++G + D  +YT  +    R + F  ++K+L QM   GC+PNV+T+  ++H+ G+A  +
Sbjct: 338 EKSGLEPDVISYTAFIEAHCREKDFRNVDKVLVQMEHKGCKPNVITFTIIMHALGKAKQI 397

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
           NEAL V+++M+  GC PD   Y +LI I  KAG L    ++ + M+  G++PD  TY+ +
Sbjct: 398 NEALKVYEKMKKEGCVPDSSFYSSLIFILGKAGRLTDVKEIVEDMEKQGVTPDVLTYNTL 457

Query: 472 INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF 531
           I+C       + A  L  +M    C P+L TY+ ++ +  + +  +    L   M     
Sbjct: 458 ISCACAHSQEETALTLLLKMEEVSCKPDLKTYHPLLKMFCRKKRMKVLKFLLDHMFKNDV 517

Query: 532 EPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLL 576
             +  TY+I++  L   G L  A + F EM  K  VP +  + +L
Sbjct: 518 SIEAGTYAILVRGLCENGKLHLACSFFGEMLSKAMVPKDSTFKML 562



 Score =  108 bits (270), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 62/262 (23%), Positives = 124/262 (47%)

Query: 362 TYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQM 421
           ++  ++    +A++     K++ ++ + G +P+V++Y   I ++ R         V  QM
Sbjct: 313 SFNVLIHGYCKAKKLDEAWKIMGEVEKSGLEPDVISYTAFIEAHCREKDFRNVDKVLVQM 372

Query: 422 QVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHL 481
           +  GC+P+ +T+  ++    KA  ++ A+ +Y+KM+  G  PD+  YS +I  LGKAG L
Sbjct: 373 EHKGCKPNVITFTIIMHALGKAKQINEALKVYEKMKKEGCVPDSSFYSSLIFILGKAGRL 432

Query: 482 QAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIV 541
               ++  +M  QG  P+++TYN +I+        ++AL L   M+    +PD  TY  +
Sbjct: 433 TDVKEIVEDMEKQGVTPDVLTYNTLISCACAHSQEETALTLLLKMEEVSCKPDLKTYHPL 492

Query: 542 MEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGL 601
           +++      +   + +   M + +   +   Y +LV    + G +  A  ++  ML   +
Sbjct: 493 LKMFCRKKRMKVLKFLLDHMFKNDVSIEAGTYAILVRGLCENGKLHLACSFFGEMLSKAM 552

Query: 602 RPNVPTCNSLLSAFLRVGQLSD 623
            P   T   L     R   L +
Sbjct: 553 VPKDSTFKMLKEELERKSMLEE 574


>gi|218193742|gb|EEC76169.1| hypothetical protein OsI_13484 [Oryza sativa Indica Group]
          Length = 1874

 Score =  159 bits (403), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 110/390 (28%), Positives = 184/390 (47%), Gaps = 5/390 (1%)

Query: 339  DHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTY 398
            D   A GFF W+  Q G+ H   +Y  MV ILG+ +QF  +  L++QMV  G   +++T 
Sbjct: 1465 DWVAAFGFFMWVGTQGGYCHCADSYDLMVDILGKFKQFDLMWGLINQMVEVGGLMSLMTM 1524

Query: 399  NRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQA 458
             +++     A+   EA+D F +M   G   D      L+D   K   +  A  ++++++ 
Sbjct: 1525 TKVMRRLAGASRWTEAIDAFHKMDRFGVVKDTKAMNVLLDTLCKERSVKRARGVFQELRG 1584

Query: 459  AGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQS 518
              + PD  +++ +++   KA  L+ A     EM   G  P++VTY  ++      +++Q+
Sbjct: 1585 T-IPPDENSFNTLVHGWCKARMLKEALDTMEEMKQHGFSPSVVTYTSLVEAYCMEKDFQT 1643

Query: 519  ALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVD 578
               L  +M+     P+ VTY+I+M  LG  G   EA   F +++     PD   Y  L+ 
Sbjct: 1644 VYALLDEMRKRRCPPNVVTYTILMHALGKAGRTREALDTFDKLKEDGVAPDASFYNSLIY 1703

Query: 579  LWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKP 638
            + G+AG +  A+   E M   G+ PNV T N+L+SA     Q  +A  LL  M      P
Sbjct: 1704 ILGRAGRLEDAYSVVEEMRTTGIAPNVTTFNTLISAACDHSQAENALKLLVKMEEQSCNP 1763

Query: 639  SLQTYTLLLSCCTEARSPYDMGF--CHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGS 696
             ++TYT LL  C + +    + F  CH            + L +     +G+  +  +  
Sbjct: 1764 DIKTYTPLLKLCCKRQWVKILLFLVCHMFRKDISPDFSTYTLLVSWLCRNGKVAQSCL-- 1821

Query: 697  FLEMMHSEDRESKRGLVDAVVDFLHKSGLK 726
            FLE M S+    K+   D V++ L K  L+
Sbjct: 1822 FLEEMVSKGFAPKQETFDLVMEKLEKRNLQ 1851


>gi|224123314|ref|XP_002319048.1| predicted protein [Populus trichocarpa]
 gi|222857424|gb|EEE94971.1| predicted protein [Populus trichocarpa]
          Length = 497

 Score =  159 bits (403), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 102/369 (27%), Positives = 182/369 (49%), Gaps = 8/369 (2%)

Query: 283 GLAPFSRHFASTGNVVESVSRILRQWKWGPLAEEALGNTNYSMDAYQANQVLK---QLQD 339
           GL P    F++  N + S ++I+   K   L +E +    Y  D    + ++    ++  
Sbjct: 42  GLQPNHVTFSTLLNGLSSKAKIIDAVK---LFDEMV-KMGYEPDVITYSTIINGLCKMGS 97

Query: 340 HTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYN 399
            T+A+     +  + G K +   Y+T++  L + +      + L +MV  G  PNVVTY+
Sbjct: 98  TTMAIQLLKKMEEK-GCKPNVVVYSTIIDSLCKDKLITEAMEFLSEMVNRGISPNVVTYS 156

Query: 400 RLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAA 459
            ++H +      NEA  +FKQM      PD VT+  L+D  +K G +  A  +++ M   
Sbjct: 157 SILHGFCNLGRSNEATSLFKQMVERNVMPDTVTFNILVDGLSKEGMILEAQCVFETMIEK 216

Query: 460 GLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSA 519
           G+ P+  TY+ +++       +  A +LF  MV +GC P++ +YNI+I    K+     A
Sbjct: 217 GVEPNVNTYNALMDGYCSQSQMDEAQKLFNIMVRKGCAPSVRSYNILIKGHCKSGRIDEA 276

Query: 520 LKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDL 579
             L  +M +    PD VTYS +M+     G   +A+ +  EMR    +PD   Y +++D 
Sbjct: 277 KGLLAEMSHKALTPDTVTYSTLMKGFCQDGRPQDAQKLLEEMRSYGLLPDLMTYSIVLDG 336

Query: 580 WGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPS 639
             K G++ +A+E  +AM ++ + PN+     L+      G+L  A  L   +   G++P 
Sbjct: 337 LCKQGHLDEAFELLKAMQESKIEPNIFIYTILIQGMCNFGKLEAARELFSNLFVKGIQPD 396

Query: 640 LQTYTLLLS 648
           + TYT+++S
Sbjct: 397 VVTYTVMIS 405



 Score =  146 bits (368), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 120/447 (26%), Positives = 196/447 (43%), Gaps = 17/447 (3%)

Query: 359 DEHTYTTMVGILGRARQ--FGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALD 416
           D +T T ++     +    F     +L  M + G QPN VT++ L++       + +A+ 
Sbjct: 9   DVYTLTILINCFCHSNHDHFHFAFSVLGNMFKLGLQPNHVTFSTLLNGLSSKAKIIDAVK 68

Query: 417 VFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLG 476
           +F +M  +G EPD +TY T+I+   K G   +A+ + KKM+  G  P+   YS II+ L 
Sbjct: 69  LFDEMVKMGYEPDVITYSTIINGLCKMGSTTMAIQLLKKMEEKGCKPNVVVYSTIIDSLC 128

Query: 477 KAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKV 536
           K   +  A +   EMVN+G  PN+VTY+ ++           A  L++ M      PD V
Sbjct: 129 KDKLITEAMEFLSEMVNRGISPNVVTYSSILHGFCNLGRSNEATSLFKQMVERNVMPDTV 188

Query: 537 TYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAM 596
           T++I+++ L   G + EA+ VF  M  K   P+   Y  L+D +     + +A + +  M
Sbjct: 189 TFNILVDGLSKEGMILEAQCVFETMIEKGVEPNVNTYNALMDGYCSQSQMDEAQKLFNIM 248

Query: 597 LQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTY-TLLLSCCTEARS 655
           ++ G  P+V + N L+    + G++ +A  LL  M +  L P   TY TL+   C + R 
Sbjct: 249 VRKGCAPSVRSYNILIKGHCKSGRIDEAKGLLAEMSHKALTPDTVTYSTLMKGFCQDGR- 307

Query: 656 PYDMGFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRESKRGLVDA 715
           P D     E M   G    +   S+   G   Q   D     L+ M     E    +   
Sbjct: 308 PQDAQKLLEEMRSYGLLPDLMTYSIVLDGLCKQGHLDEAFELLKAMQESKIEPNIFIYTI 367

Query: 716 VVDFLHKSGLKEEAGSVWEVAAQKNVYPDAVKEKGMSYWLINLHVMSDGTAVIALSRTLA 775
           ++  +   G  E A  ++     K + PD V     +Y      VM  G     LS    
Sbjct: 368 LIQGMCNFGKLEAARELFSNLFVKGIQPDVV-----TYT-----VMISGLLKGGLSNEAC 417

Query: 776 WFRKQMLISGVGPSRID---IVTGWGR 799
              + M + G  P+      I+ G+ R
Sbjct: 418 ELFRDMAVHGCLPNSCTYNVIIQGFLR 444



 Score =  145 bits (367), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 87/288 (30%), Positives = 144/288 (50%)

Query: 359 DEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVF 418
           D  T+  +V  L +         + + M+  G +PNV TYN L+  Y   + ++EA  +F
Sbjct: 186 DTVTFNILVDGLSKEGMILEAQCVFETMIEKGVEPNVNTYNALMDGYCSQSQMDEAQKLF 245

Query: 419 KQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKA 478
             M   GC P   +Y  LI  H K+G +D A  +  +M    L+PDT TYS ++    + 
Sbjct: 246 NIMVRKGCAPSVRSYNILIKGHCKSGRIDEAKGLLAEMSHKALTPDTVTYSTLMKGFCQD 305

Query: 479 GHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTY 538
           G  Q A +L  EM + G +P+L+TY+I++    K  +   A +L + MQ +  EP+   Y
Sbjct: 306 GRPQDAQKLLEEMRSYGLLPDLMTYSIVLDGLCKQGHLDEAFELLKAMQESKIEPNIFIY 365

Query: 539 SIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQ 598
           +I+++ + + G L+ A  +F+ +  K   PD   Y +++    K G   +A E +  M  
Sbjct: 366 TILIQGMCNFGKLEAARELFSNLFVKGIQPDVVTYTVMISGLLKGGLSNEACELFRDMAV 425

Query: 599 AGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLL 646
            G  PN  T N ++  FLR G  S+A  L++ M+  G      T+ +L
Sbjct: 426 HGCLPNSCTYNVIIQGFLRNGDTSNAGRLIEEMVGRGFSADSSTFQML 473



 Score =  121 bits (304), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 72/255 (28%), Positives = 126/255 (49%)

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
           + G + + +TY  ++       Q     KL + MVR GC P+V +YN LI  + ++  ++
Sbjct: 215 EKGVEPNVNTYNALMDGYCSQSQMDEAQKLFNIMVRKGCAPSVRSYNILIKGHCKSGRID 274

Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
           EA  +  +M      PD VTY TL+    + G    A  + ++M++ GL PD  TYS+++
Sbjct: 275 EAKGLLAEMSHKALTPDTVTYSTLMKGFCQDGRPQDAQKLLEEMRSYGLLPDLMTYSIVL 334

Query: 473 NCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFE 532
           + L K GHL  A +L   M      PN+  Y I+I         ++A +L+ ++   G +
Sbjct: 335 DGLCKQGHLDEAFELLKAMQESKIEPNIFIYTILIQGMCNFGKLEAARELFSNLFVKGIQ 394

Query: 533 PDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEW 592
           PD VTY++++  L   G  +EA  +F +M     +P+   Y +++  + + G+   A   
Sbjct: 395 PDVVTYTVMISGLLKGGLSNEACELFRDMAVHGCLPNSCTYNVIIQGFLRNGDTSNAGRL 454

Query: 593 YEAMLQAGLRPNVPT 607
            E M+  G   +  T
Sbjct: 455 IEEMVGRGFSADSST 469



 Score =  109 bits (273), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 69/261 (26%), Positives = 125/261 (47%), Gaps = 7/261 (2%)

Query: 322 NYSMDAYQANQVLKQLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINK 381
           N  MD Y +   + + Q        FN + R+ G      +Y  ++    ++ +      
Sbjct: 226 NALMDGYCSQSQMDEAQK------LFNIMVRK-GCAPSVRSYNILIKGHCKSGRIDEAKG 278

Query: 382 LLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHA 441
           LL +M      P+ VTY+ L+  + +     +A  + ++M+  G  PD +TY  ++D   
Sbjct: 279 LLAEMSHKALTPDTVTYSTLMKGFCQDGRPQDAQKLLEEMRSYGLLPDLMTYSIVLDGLC 338

Query: 442 KAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLV 501
           K G LD A ++ K MQ + + P+ F Y+++I  +   G L+AA +LF  +  +G  P++V
Sbjct: 339 KQGHLDEAFELLKAMQESKIEPNIFIYTILIQGMCNFGKLEAARELFSNLFVKGIQPDVV 398

Query: 502 TYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEM 561
           TY +MI+   K      A +L+RDM   G  P+  TY+++++     G    A  +  EM
Sbjct: 399 TYTVMISGLLKGGLSNEACELFRDMAVHGCLPNSCTYNVIIQGFLRNGDTSNAGRLIEEM 458

Query: 562 RRKNWVPDEPVYGLLVDLWGK 582
             + +  D   + +L DL  +
Sbjct: 459 VGRGFSADSSTFQMLSDLESR 479



 Score = 98.6 bits (244), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 57/195 (29%), Positives = 100/195 (51%), Gaps = 4/195 (2%)

Query: 456 MQAAGLSPDTFTYSVIINCLGKAG--HLQAAHQLFCEMVNQGCIPNLVTYNIMI-ALQAK 512
           M  + + PD +T +++INC   +   H   A  +   M   G  PN VT++ ++  L +K
Sbjct: 1   MDLSNIRPDVYTLTILINCFCHSNHDHFHFAFSVLGNMFKLGLQPNHVTFSTLLNGLSSK 60

Query: 513 ARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPV 572
           A+    A+KL+ +M   G+EPD +TYS ++  L   G    A  +  +M  K   P+  V
Sbjct: 61  AK-IIDAVKLFDEMVKMGYEPDVITYSTIINGLCKMGSTTMAIQLLKKMEEKGCKPNVVV 119

Query: 573 YGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGML 632
           Y  ++D   K   + +A E+   M+  G+ PNV T +S+L  F  +G+ ++A  L + M+
Sbjct: 120 YSTIIDSLCKDKLITEAMEFLSEMVNRGISPNVVTYSSILHGFCNLGRSNEATSLFKQMV 179

Query: 633 NLGLKPSLQTYTLLL 647
              + P   T+ +L+
Sbjct: 180 ERNVMPDTVTFNILV 194


>gi|449495714|ref|XP_004159923.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At5g39710-like [Cucumis sativus]
          Length = 749

 Score =  159 bits (402), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 95/321 (29%), Positives = 164/321 (51%), Gaps = 13/321 (4%)

Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINK-LLDQMVRDGCQPNVVTYNRL 401
           AL   N L +  GF     +Y  ++  + R +Q   I + +  +MV  G  PNV TYN L
Sbjct: 151 ALSIVN-LAKSYGFMPGVLSYNAILDAVIRTKQSVKIAEGIFKEMVESGVSPNVYTYNIL 209

Query: 402 IHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGL 461
           I  +  A  L   L  F +M+  GC P+ VTY T+ID + K   +  A  + + M   GL
Sbjct: 210 IRGFCTAGNLEMGLXFFGEMERNGCLPNVVTYNTIIDAYCKLRKIGEAFKLLRLMALKGL 269

Query: 462 SPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALK 521
           +P+  +Y+V+IN L + G ++   ++  EM  +  +P+ VT+N +I       N+  AL 
Sbjct: 270 NPNLISYNVVINGLCREGQMKETSEILEEMSKRRYVPDRVTFNTLINGYCNVGNFHQALV 329

Query: 522 LYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWG 581
           L+ +M   G  P+ VTY+ ++  +   G L+ A     +MR +   P+   Y  L+D + 
Sbjct: 330 LHAEMVKNGLSPNVVTYTTLINSMCKAGNLNRAMEFLDQMRDRGLHPNGRTYTTLIDGFS 389

Query: 582 KAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQ 641
           + G +++A++  + M++ G  P + T N+L++    +G++ DA  LLQ M+  G  P + 
Sbjct: 390 QQGFLKQAYQIMKEMVENGFTPTIITYNALINGHCILGRMEDASGLLQEMIERGFIPDVV 449

Query: 642 TYTLLLSCCTEARSPYDMGFC 662
           +Y+ ++S           GFC
Sbjct: 450 SYSTIIS-----------GFC 459



 Score =  155 bits (393), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 95/315 (30%), Positives = 165/315 (52%), Gaps = 6/315 (1%)

Query: 342 VALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRL 401
           + L FF  + R  G   +  TY T++    + R+ G   KLL  M   G  PN+++YN +
Sbjct: 221 MGLXFFGEMERN-GCLPNVVTYNTIIDAYCKLRKIGEAFKLLRLMALKGLNPNLISYNVV 279

Query: 402 IHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGL 461
           I+   R   + E  ++ ++M      PDRVT+ TLI+ +   G    A+ ++ +M   GL
Sbjct: 280 INGLCREGQMKETSEILEEMSKRRYVPDRVTFNTLINGYCNVGNFHQALVLHAEMVKNGL 339

Query: 462 SPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALK 521
           SP+  TY+ +IN + KAG+L  A +   +M ++G  PN  TY  +I   ++    + A +
Sbjct: 340 SPNVVTYTTLINSMCKAGNLNRAMEFLDQMRDRGLHPNGRTYTTLIDGFSQQGFLKQAYQ 399

Query: 522 LYRDMQNAGFEPDKVTYSIVMEVLGHC--GYLDEAEAVFAEMRRKNWVPDEPVYGLLVDL 579
           + ++M   GF P  +TY+ ++   GHC  G +++A  +  EM  + ++PD   Y  ++  
Sbjct: 400 IMKEMVENGFTPTIITYNALIN--GHCILGRMEDASGLLQEMIERGFIPDVVSYSTIISG 457

Query: 580 WGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPS 639
           + +   + KA++    M+  G+ P+V T +SL+    +  +L +   L Q ML+LGL P 
Sbjct: 458 FCRNQELEKAFQLKVEMVAKGISPDVATYSSLIQGLCKQRRLGEVCDLFQEMLSLGLPPD 517

Query: 640 LQTYTLLLSC-CTEA 653
             TYT L++  C E 
Sbjct: 518 EVTYTSLINAYCIEG 532



 Score =  154 bits (388), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 99/308 (32%), Positives = 157/308 (50%), Gaps = 4/308 (1%)

Query: 359 DEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVF 418
           D  T+ T++        F     L  +MV++G  PNVVTY  LI+S  +A  LN A++  
Sbjct: 307 DRVTFNTLINGYCNVGNFHQALVLHAEMVKNGLSPNVVTYTTLINSMCKAGNLNRAMEFL 366

Query: 419 KQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKA 478
            QM+  G  P+  TY TLID  ++ GFL  A  + K+M   G +P   TY+ +IN     
Sbjct: 367 DQMRDRGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVENGFTPTIITYNALINGHCIL 426

Query: 479 GHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTY 538
           G ++ A  L  EM+ +G IP++V+Y+ +I+   + +  + A +L  +M   G  PD  TY
Sbjct: 427 GRMEDASGLLQEMIERGFIPDVVSYSTIISGFCRNQELEKAFQLKVEMVAKGISPDVATY 486

Query: 539 SIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQ 598
           S +++ L     L E   +F EM      PDE  Y  L++ +   G++ KA   ++ M+Q
Sbjct: 487 SSLIQGLCKQRRLGEVCDLFQEMLSLGLPPDEVTYTSLINAYCIEGDLDKALRLHDEMIQ 546

Query: 599 AGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCT--EARSP 656
            G  P++ T N L++ F +  +  +A  LL  +L     P+  TY  L+  C   E +S 
Sbjct: 547 KGFSPDIVTYNVLINGFNKQSRTKEAKRLLLKLLYEESVPNEITYNTLIDNCNNLEFKSA 606

Query: 657 YDM--GFC 662
             +  GFC
Sbjct: 607 LALMKGFC 614



 Score =  144 bits (364), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 94/304 (30%), Positives = 152/304 (50%), Gaps = 2/304 (0%)

Query: 347 FNWLRRQA--GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHS 404
           F  LR  A  G   +  +Y  ++  L R  Q    +++L++M +    P+ VT+N LI+ 
Sbjct: 258 FKLLRLMALKGLNPNLISYNVVINGLCREGQMKETSEILEEMSKRRYVPDRVTFNTLING 317

Query: 405 YGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPD 464
           Y      ++AL +  +M   G  P+ VTY TLI+   KAG L+ AM+   +M+  GL P+
Sbjct: 318 YCNVGNFHQALVLHAEMVKNGLSPNVVTYTTLINSMCKAGNLNRAMEFLDQMRDRGLHPN 377

Query: 465 TFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYR 524
             TY+ +I+   + G L+ A+Q+  EMV  G  P ++TYN +I         + A  L +
Sbjct: 378 GRTYTTLIDGFSQQGFLKQAYQIMKEMVENGFTPTIITYNALINGHCILGRMEDASGLLQ 437

Query: 525 DMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAG 584
           +M   GF PD V+YS ++        L++A  +  EM  K   PD   Y  L+    K  
Sbjct: 438 EMIERGFIPDVVSYSTIISGFCRNQELEKAFQLKVEMVAKGISPDVATYSSLIQGLCKQR 497

Query: 585 NVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYT 644
            + +  + ++ ML  GL P+  T  SL++A+   G L  A  L   M+  G  P + TY 
Sbjct: 498 RLGEVCDLFQEMLSLGLPPDEVTYTSLINAYCIEGDLDKALRLHDEMIQKGFSPDIVTYN 557

Query: 645 LLLS 648
           +L++
Sbjct: 558 VLIN 561



 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 82/278 (29%), Positives = 137/278 (49%), Gaps = 24/278 (8%)

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
           + GF  D  +Y+T++    R ++     +L  +MV  G  P+V TY+ LI    +   L 
Sbjct: 441 ERGFIPDVVSYSTIISGFCRNQELEKAFQLKVEMVAKGISPDVATYSSLIQGLCKQRRLG 500

Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
           E  D+F++M  +G  PD VTY +LI+ +   G LD A+ ++ +M   G SPD  TY+V+I
Sbjct: 501 EVCDLFQEMLSLGLPPDEVTYTSLINAYCIEGDLDKALRLHDEMIQKGFSPDIVTYNVLI 560

Query: 473 NCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFE 532
           N   K    + A +L  +++ +  +PN +TYN +I        ++SAL L +        
Sbjct: 561 NGFNKQSRTKEAKRLLLKLLYEESVPNEITYNTLID-NCNNLEFKSALALMK-------- 611

Query: 533 PDKVTYSIVMEVLGHC--GYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAW 590
                        G C  G ++EA+ V   M +K +  +E VY +++    K GN+ KA+
Sbjct: 612 -------------GFCMKGLMNEADRVLESMLQKGYKLNEEVYNVIIHGHSKVGNIEKAY 658

Query: 591 EWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLL 628
             Y+ ML +G  P+  T  +L  +    G+  +   LL
Sbjct: 659 NLYKEMLHSGFAPHSVTIMALAKSLYHEGKEVELNQLL 696



 Score =  129 bits (324), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 94/317 (29%), Positives = 154/317 (48%), Gaps = 28/317 (8%)

Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMV------GILGRARQFGAINKLLDQMVRDGCQPNVV 396
           A+ F + +R + G   +  TYTT++      G L +A Q      ++ +MV +G  P ++
Sbjct: 362 AMEFLDQMRDR-GLHPNGRTYTTLIDGFSQQGFLKQAYQ------IMKEMVENGFTPTII 414

Query: 397 TYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKM 456
           TYN LI+ +     + +A  + ++M   G  PD V+Y T+I    +   L+ A  +  +M
Sbjct: 415 TYNALINGHCILGRMEDASGLLQEMIERGFIPDVVSYSTIISGFCRNQELEKAFQLKVEM 474

Query: 457 QAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNY 516
            A G+SPD  TYS +I  L K   L     LF EM++ G  P+ VTY  +I       + 
Sbjct: 475 VAKGISPDVATYSSLIQGLCKQRRLGEVCDLFQEMLSLGLPPDEVTYTSLINAYCIEGDL 534

Query: 517 QSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLL 576
             AL+L+ +M   GF PD VTY++++          EA+ +  ++  +  VP+E  Y  L
Sbjct: 535 DKALRLHDEMIQKGFSPDIVTYNVLINGFNKQSRTKEAKRLLLKLLYEESVPNEITYNTL 594

Query: 577 VD----LWGKA-----------GNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQL 621
           +D    L  K+           G + +A    E+MLQ G + N    N ++    +VG +
Sbjct: 595 IDNCNNLEFKSALALMKGFCMKGLMNEADRVLESMLQKGYKLNEEVYNVIIHGHSKVGNI 654

Query: 622 SDAYHLLQGMLNLGLKP 638
             AY+L + ML+ G  P
Sbjct: 655 EKAYNLYKEMLHSGFAP 671



 Score =  105 bits (261), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 82/357 (22%), Positives = 150/357 (42%), Gaps = 61/357 (17%)

Query: 330 ANQVLKQLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRD 389
           +N +LK   D ++ L F +W R Q  F          + IL R + +     L +++V  
Sbjct: 51  SNLLLKSQFDSSLVLKFLDWARSQQFFSF--QCKCLALHILTRYKLYKTAQSLAEEVV-- 106

Query: 390 GCQPNVVTYNRLIHSYGRANYLNE-ALDVFKQMQ--VVGCEPDRVTYCTLIDIHAKAGFL 446
                              N ++E   D+F+ ++     C+     +  ++   A+   +
Sbjct: 107 ------------------VNTVDETGEDLFQCLKNSYYQCKSSSAVFDLVVKSCARVNLI 148

Query: 447 DVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGH-LQAAHQLFCEMVNQGCIPNLVTYNI 505
           + A+ +    ++ G  P   +Y+ I++ + +    ++ A  +F EMV  G  PN+ TYNI
Sbjct: 149 NKALSIVNLAKSYGFMPGVLSYNAILDAVIRTKQSVKIAEGIFKEMVESGVSPNVYTYNI 208

Query: 506 MIA-----------------------------------LQAKARNYQSALKLYRDMQNAG 530
           +I                                       K R    A KL R M   G
Sbjct: 209 LIRGFCTAGNLEMGLXFFGEMERNGCLPNVVTYNTIIDAYCKLRKIGEAFKLLRLMALKG 268

Query: 531 FEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAW 590
             P+ ++Y++V+  L   G + E   +  EM ++ +VPD   +  L++ +   GN  +A 
Sbjct: 269 LNPNLISYNVVINGLCREGQMKETSEILEEMSKRRYVPDRVTFNTLINGYCNVGNFHQAL 328

Query: 591 EWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
             +  M++ GL PNV T  +L+++  + G L+ A   L  M + GL P+ +TYT L+
Sbjct: 329 VLHAEMVKNGLSPNVVTYTTLINSMCKAGNLNRAMEFLDQMRDRGLHPNGRTYTTLI 385



 Score = 60.5 bits (145), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 45/196 (22%), Positives = 82/196 (41%), Gaps = 15/196 (7%)

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANY-- 410
           Q GF  D  TY  ++    +  +     +LL +++ +   PN +TYN LI +     +  
Sbjct: 546 QKGFSPDIVTYNVLINGFNKQSRTKEAKRLLLKLLYEESVPNEITYNTLIDNCNNLEFKS 605

Query: 411 -------------LNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQ 457
                        +NEA  V + M   G + +   Y  +I  H+K G ++ A ++YK+M 
Sbjct: 606 ALALMKGFCMKGLMNEADRVLESMLQKGYKLNEEVYNVIIHGHSKVGNIEKAYNLYKEML 665

Query: 458 AAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQ 517
            +G +P + T   +   L   G     +QL    +    I       ++I + +K  N  
Sbjct: 666 HSGFAPHSVTIMALAKSLYHEGKEVELNQLLDYTLKSCRITEAALAKVLIGINSKEGNMD 725

Query: 518 SALKLYRDMQNAGFEP 533
           +   + +DM  +G  P
Sbjct: 726 AVFNVLKDMALSGLLP 741


>gi|413952776|gb|AFW85425.1| chloroplast RNA splicing4 [Zea mays]
          Length = 1435

 Score =  159 bits (402), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 89/298 (29%), Positives = 163/298 (54%), Gaps = 2/298 (0%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           R AG       +  M+G+  R+ +F    +LLD M   G  P++V++N LI++  ++  L
Sbjct: 213 RFAGEGATVQVFNAMMGVYARSGRFDDARQLLDTMHDRGIDPDLVSFNTLINARSKSGCL 272

Query: 412 NE--ALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYS 469
               ALD+  +++  G  PD +TY TLI   +++  L+ A+ +++ M A+   PD +TY+
Sbjct: 273 AAGVALDLLFEVRQSGLRPDVITYNTLISACSQSSNLEDAVTVFEDMIASECRPDLWTYN 332

Query: 470 VIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNA 529
            +++  G+ G  + A +LF E+V +G +P+ +TYN ++   AK  N          +  A
Sbjct: 333 AMVSVHGRCGKAEEAERLFRELVEKGFMPDAITYNSLLYAFAKEGNVDKVEHTCEQLVKA 392

Query: 530 GFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKA 589
           GF+ +++TY+ ++ + G  G LD A  ++ EMR     PD   Y +++D  GK   + +A
Sbjct: 393 GFKKNEITYNTMIHMYGKMGRLDLAVGLYDEMRAMGCTPDAVTYTVMIDSLGKMNRIAEA 452

Query: 590 WEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
            +  E M  AGL+P +   ++L+ A+ + G+ +DA +    M+  G+KP    Y ++L
Sbjct: 453 GKVLEDMTDAGLKPTLIAFSALICAYAKGGRRADAENTFDCMIASGVKPDRLAYLVML 510



 Score =  152 bits (384), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 90/341 (26%), Positives = 174/341 (51%), Gaps = 7/341 (2%)

Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLI 402
           AL  F WL R +           ++G+LGRARQ     ++  +   +G    V  +N ++
Sbjct: 173 ALDAFEWLARSSA--PASRAVAVVLGVLGRARQDSIAEEVFLRFAGEGA--TVQVFNAMM 228

Query: 403 HSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFL--DVAMDMYKKMQAAG 460
             Y R+   ++A  +   M   G +PD V++ TLI+  +K+G L   VA+D+  +++ +G
Sbjct: 229 GVYARSGRFDDARQLLDTMHDRGIDPDLVSFNTLINARSKSGCLAAGVALDLLFEVRQSG 288

Query: 461 LSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSAL 520
           L PD  TY+ +I+   ++ +L+ A  +F +M+   C P+L TYN M+++  +    + A 
Sbjct: 289 LRPDVITYNTLISACSQSSNLEDAVTVFEDMIASECRPDLWTYNAMVSVHGRCGKAEEAE 348

Query: 521 KLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLW 580
           +L+R++   GF PD +TY+ ++      G +D+ E    ++ +  +  +E  Y  ++ ++
Sbjct: 349 RLFRELVEKGFMPDAITYNSLLYAFAKEGNVDKVEHTCEQLVKAGFKKNEITYNTMIHMY 408

Query: 581 GKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSL 640
           GK G +  A   Y+ M   G  P+  T   ++ +  ++ ++++A  +L+ M + GLKP+L
Sbjct: 409 GKMGRLDLAVGLYDEMRAMGCTPDAVTYTVMIDSLGKMNRIAEAGKVLEDMTDAGLKPTL 468

Query: 641 QTYTLLLSCCTEARSPYDMGFCHELMAVSG-HPAHMFLLSM 680
             ++ L+    +     D     + M  SG  P  +  L M
Sbjct: 469 IAFSALICAYAKGGRRADAENTFDCMIASGVKPDRLAYLVM 509



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 86/318 (27%), Positives = 147/318 (46%), Gaps = 13/318 (4%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           RQ+G + D  TY T++    ++        + + M+   C+P++ TYN ++  +GR    
Sbjct: 285 RQSGLRPDVITYNTLISACSQSSNLEDAVTVFEDMIASECRPDLWTYNAMVSVHGRCGKA 344

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
            EA  +F+++   G  PD +TY +L+   AK G +D      +++  AG   +  TY+ +
Sbjct: 345 EEAERLFRELVEKGFMPDAITYNSLLYAFAKEGNVDKVEHTCEQLVKAGFKKNEITYNTM 404

Query: 472 INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF 531
           I+  GK G L  A  L+ EM   GC P+ VTY +MI    K      A K+  DM +AG 
Sbjct: 405 IHMYGKMGRLDLAVGLYDEMRAMGCTPDAVTYTVMIDSLGKMNRIAEAGKVLEDMTDAGL 464

Query: 532 EPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWE 591
           +P  + +S ++      G   +AE  F  M      PD   Y +++D++ ++G+  K   
Sbjct: 465 KPTLIAFSALICAYAKGGRRADAENTFDCMIASGVKPDRLAYLVMLDVFARSGDTEKMLC 524

Query: 592 WYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGM-----LNLGLKPSL------ 640
            Y  M+    RP+      LL A  +  +  +   ++Q M     +NLG+  ++      
Sbjct: 525 LYRKMMNDNYRPDDDMYQVLLVALAKEDKCEEIEEVIQDMELLCRMNLGIISTMLIKARC 584

Query: 641 --QTYTLLLSCCTEARSP 656
             Q   LL   C +   P
Sbjct: 585 VSQGAKLLKKACLQGYKP 602



 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 109/494 (22%), Positives = 214/494 (43%), Gaps = 10/494 (2%)

Query: 356  FKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEAL 415
            FK  + T   ++    +A     + K+ + M   G  PN+  Y  +I      N   +  
Sbjct: 846  FKISKSTVLLLLDAFAKAGDVFEVMKIYNGMKAAGYLPNMHLYRSMISLLCHHNRFRDVE 905

Query: 416  DVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCL 475
             +  +M+  G +PD      L++++  AG  D    +Y+ +  AGL PD  TY+ +I   
Sbjct: 906  LMIAEMEGAGFKPDLAILNALLNMYTAAGNFDRTTQVYRSILEAGLEPDEDTYNTLIVMY 965

Query: 476  GKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDK 535
             ++   +    L  EM  +G  P L +Y  ++A  AKA   + A +++ +M++  ++ ++
Sbjct: 966  CRSFRPEEGFTLLNEMGKRGLTPKLQSYKSLLAASAKAELREQADQIFEEMRSKSYQLNR 1025

Query: 536  VTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEA 595
              Y ++M++  + G   +AE + A M+     P      +L+  +G AG  R+A      
Sbjct: 1026 SIYHMMMKIYRNAGNHSKAENLLAVMKEDGIEPTIATMHILMTSYGTAGQPREAENVLNN 1085

Query: 596  MLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARS 655
            +  + L  +    +++  A+L+ G  +     L  M   G++P  Q +T  +   +    
Sbjct: 1086 LKSSSLEVSTLPYSTVFDAYLKNGDYNHGTTKLLEMKRDGVEPDHQVWTCFIRAASLCEQ 1145

Query: 656  PYDMGFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRESKRGLVDA 715
              D     + +   G    + LL+  +P     ++   + ++LE + + +  +    V+A
Sbjct: 1146 TADAILLLKSLQDCGFDLPIRLLTERTP-----SLLSEIANYLEELEALEDSAALNFVNA 1200

Query: 716  VVDFLHKSGLKEEAGSVWEVAAQKNVYPDAVKEKGMSYWLINLHVMSDGTAVIALSRTLA 775
            V D L     +  A  ++++A ++++Y D V       W  +   +S G A++ L+  L 
Sbjct: 1201 VEDLLWAFECRATASRIFQLAVERSIYRDNVFRVAQKDWGADFRKLSAGAALVGLTLWLD 1260

Query: 776  WFRKQMLI-SGVGPSRIDIVTGWGRRSRVTGTSLVRQAVQELLHMFSFPFFTENGNSGCF 834
              +   L  S   P  + +VTG G  + V+    +R+ ++  L     PF      SG F
Sbjct: 1261 HMQDASLQGSPESPKSVVLVTGEGEYNMVS----LRKTIRAYLLEMGSPFLPCRARSGRF 1316

Query: 835  VGCGEPLNKWLLQS 848
            V     L  WL  S
Sbjct: 1317 VVKDYSLKMWLKDS 1330



 Score =  133 bits (335), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 75/271 (27%), Positives = 132/271 (48%)

Query: 377 GAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTL 436
           G    LL ++ + G +P+V+TYN LI +  +++ L +A+ VF+ M    C PD  TY  +
Sbjct: 275 GVALDLLFEVRQSGLRPDVITYNTLISACSQSSNLEDAVTVFEDMIASECRPDLWTYNAM 334

Query: 437 IDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGC 496
           + +H + G  + A  +++++   G  PD  TY+ ++    K G++        ++V  G 
Sbjct: 335 VSVHGRCGKAEEAERLFRELVEKGFMPDAITYNSLLYAFAKEGNVDKVEHTCEQLVKAGF 394

Query: 497 IPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEA 556
             N +TYN MI +  K      A+ LY +M+  G  PD VTY+++++ LG    + EA  
Sbjct: 395 KKNEITYNTMIHMYGKMGRLDLAVGLYDEMRAMGCTPDAVTYTVMIDSLGKMNRIAEAGK 454

Query: 557 VFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFL 616
           V  +M      P    +  L+  + K G    A   ++ M+ +G++P+      +L  F 
Sbjct: 455 VLEDMTDAGLKPTLIAFSALICAYAKGGRRADAENTFDCMIASGVKPDRLAYLVMLDVFA 514

Query: 617 RVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
           R G       L + M+N   +P    Y +LL
Sbjct: 515 RSGDTEKMLCLYRKMMNDNYRPDDDMYQVLL 545



 Score = 76.6 bits (187), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 76/379 (20%), Positives = 167/379 (44%), Gaps = 5/379 (1%)

Query: 369 ILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQM-QVVGCE 427
           +L +AR      KLL +    G +P++ +   ++++Y       E L + + + + V   
Sbjct: 578 MLIKARCVSQGAKLLKKACLQGYKPDIKSLRSIMNAYVMTEKHEEGLSLLECICEHVSFS 637

Query: 428 PDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQL 487
            D ++ C+++ +  K   +       +++       +   Y  +I CL +A     A Q+
Sbjct: 638 QDLISECSIMLLCRKQTSISAYEQYSQRLMLKYPGQNCNLYEYLITCLIEAEFFSEACQV 697

Query: 488 FCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYS-IVMEVLG 546
           FC+M   G   +   Y  +I+   K    ++A +L  D   +G   + ++   I++E  G
Sbjct: 698 FCDMQFIGIEASKSIYESIISTYCKLGFPETAHRLMDDALQSGIPLNILSCRVIIIEAYG 757

Query: 547 HCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVP 606
                 +AE +   +R+ + + D  ++  L+  + ++G   KA   ++ M++ G  P V 
Sbjct: 758 KIKLWQQAEILVKGLRQASGI-DRRIWNALIHAYAESGLYEKARAVFDNMIKTGPLPTVD 816

Query: 607 TCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGFCHELM 666
           + N ++ A +  G+L + Y +++ + ++  K S  T  LLL    +A   +++   +  M
Sbjct: 817 SVNGMMRALIVDGRLDELYVVVEELQDMNFKISKSTVLLLLDAFAKAGDVFEVMKIYNGM 876

Query: 667 AVSGHPAHMFLL-SMPSPGPDGQNVRDHVGSFLEMMHSEDRESKRGLVDAVVDFLHKSGL 725
             +G+  +M L  SM S        RD V   +  M     +    +++A+++    +G 
Sbjct: 877 KAAGYLPNMHLYRSMISLLCHHNRFRD-VELMIAEMEGAGFKPDLAILNALLNMYTAAGN 935

Query: 726 KEEAGSVWEVAAQKNVYPD 744
            +    V+    +  + PD
Sbjct: 936 FDRTTQVYRSILEAGLEPD 954



 Score = 48.1 bits (113), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 55/233 (23%), Positives = 97/233 (41%), Gaps = 14/233 (6%)

Query: 526 MQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGN 585
           +  A   PD+V +  V+  +G   +    +A   E   ++  P      +++ + G+A  
Sbjct: 148 LDGARASPDEVAF--VVRAVGESSWRRALDAF--EWLARSSAPASRAVAVVLGVLGRARQ 203

Query: 586 VRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTL 645
              A E +  +  AG    V   N+++  + R G+  DA  LL  M + G+ P L ++  
Sbjct: 204 DSIAEEVF--LRFAGEGATVQVFNAMMGVYARSGRFDDARQLLDTMHDRGIDPDLVSFNT 261

Query: 646 LL-----SCCTEARSPYDMGFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEM 700
           L+     S C  A    D+ F  E+      P  +   ++ S      N+ D V  F +M
Sbjct: 262 LINARSKSGCLAAGVALDLLF--EVRQSGLRPDVITYNTLISACSQSSNLEDAVTVFEDM 319

Query: 701 MHSEDRESKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAVKEKGMSY 753
           + SE R       +A+V    + G  EEA  ++    +K   PDA+    + Y
Sbjct: 320 IASECR-PDLWTYNAMVSVHGRCGKAEEAERLFRELVEKGFMPDAITYNSLLY 371


>gi|242084242|ref|XP_002442546.1| hypothetical protein SORBIDRAFT_08g021630 [Sorghum bicolor]
 gi|241943239|gb|EES16384.1| hypothetical protein SORBIDRAFT_08g021630 [Sorghum bicolor]
          Length = 735

 Score =  159 bits (402), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 90/304 (29%), Positives = 155/304 (50%), Gaps = 2/304 (0%)

Query: 346 FFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSY 405
           FF W  RQ  ++H    +  M+ +L R R      +++  M+R G       +  L+ SY
Sbjct: 112 FFRWADRQWKYRHAPEVFDEMLVLLSRTRLHDPARRVMRLMIRRGMPRGTRQFAHLMLSY 171

Query: 406 GRANYLNEALDVFKQMQVVGCEPDRVTYCTL-IDIHAKAGFLDVAMDMYKKMQAAGLSPD 464
            RA  L  A+ V + MQ  GC PD +  C + +++   AG +D A++  ++M+  G+ PD
Sbjct: 172 SRAGKLRSAMRVLQLMQKDGCAPD-ICICNMAVNVLVVAGRIDKALEFAERMRRVGVDPD 230

Query: 465 TFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYR 524
             TY+ +I  L  A  +  A ++   M+  GC+P+ ++Y  +++   K +       L  
Sbjct: 231 VVTYNCLIKGLCGARRIVDALEMISSMLQNGCLPDKISYFTVMSFLCKEKRVADVQNLLE 290

Query: 525 DMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAG 584
            M +AG  PD+VTY++++  L   G+ DEA +   E   K +  DE  Y   V  +   G
Sbjct: 291 RMSDAGIFPDQVTYNMLIHGLAKHGHADEALSFLRESEGKRFRVDEVGYSATVHSFCLNG 350

Query: 585 NVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYT 644
            + +A E    M+  G RP+V T ++++  F R+G+L  A  +++ M   G KP+  T+T
Sbjct: 351 RMAEAKEIIGEMISKGCRPDVVTYSAVVDGFCRIGELDQARKMMKHMYKNGCKPNTVTHT 410

Query: 645 LLLS 648
            LL+
Sbjct: 411 ALLN 414



 Score =  114 bits (285), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 82/319 (25%), Positives = 147/319 (46%), Gaps = 2/319 (0%)

Query: 316 EALGNTNYSMDAYQANQVLKQLQDHTVALGFFNWLRRQAG--FKHDEHTYTTMVGILGRA 373
           E + +     D    N ++  L  H  A    ++LR   G  F+ DE  Y+  V      
Sbjct: 290 ERMSDAGIFPDQVTYNMLIHGLAKHGHADEALSFLRESEGKRFRVDEVGYSATVHSFCLN 349

Query: 374 RQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTY 433
            +     +++ +M+  GC+P+VVTY+ ++  + R   L++A  + K M   GC+P+ VT+
Sbjct: 350 GRMAEAKEIIGEMISKGCRPDVVTYSAVVDGFCRIGELDQARKMMKHMYKNGCKPNTVTH 409

Query: 434 CTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVN 493
             L++   K G    A ++  K +    +P   TYSV+++   + G L+ +  +  +M+ 
Sbjct: 410 TALLNGLCKVGKSSEAWELLNKSEEEWWTPSAITYSVVMHGFRREGKLKESCDVVMQMLQ 469

Query: 494 QGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDE 553
           +G  P  V  N++I      R    A       Q+ G   + V ++ V+      G L+ 
Sbjct: 470 KGFFPTTVEINLLIHALCNERKPADAKDFMEQCQSKGCFINVVNFTTVIHGFSRQGDLES 529

Query: 554 AEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLS 613
           A ++  +M   N  PD   Y ++VD  G+ G +++A    E ML  GL P   T  +++ 
Sbjct: 530 ALSLLDDMYLTNRHPDVVTYTVVVDALGRKGKMKEATSLVEKMLNRGLHPTPVTYRTVIH 589

Query: 614 AFLRVGQLSDAYHLLQGML 632
            +   G + D  +LL  ML
Sbjct: 590 RYCEKGAVEDLLNLLDKML 608



 Score =  108 bits (271), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 74/279 (26%), Positives = 121/279 (43%)

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
           Q G   D+ +Y T++  L + ++   +  LL++M   G  P+ VTYN LIH   +  + +
Sbjct: 259 QNGCLPDKISYFTVMSFLCKEKRVADVQNLLERMSDAGIFPDQVTYNMLIHGLAKHGHAD 318

Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
           EAL   ++ +      D V Y   +      G +  A ++  +M + G  PD  TYS ++
Sbjct: 319 EALSFLRESEGKRFRVDEVGYSATVHSFCLNGRMAEAKEIIGEMISKGCRPDVVTYSAVV 378

Query: 473 NCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFE 532
           +   + G L  A ++   M   GC PN VT+  ++    K      A +L    +   + 
Sbjct: 379 DGFCRIGELDQARKMMKHMYKNGCKPNTVTHTALLNGLCKVGKSSEAWELLNKSEEEWWT 438

Query: 533 PDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEW 592
           P  +TYS+VM      G L E+  V  +M +K + P      LL+           A ++
Sbjct: 439 PSAITYSVVMHGFRREGKLKESCDVVMQMLQKGFFPTTVEINLLIHALCNERKPADAKDF 498

Query: 593 YEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGM 631
            E     G   NV    +++  F R G L  A  LL  M
Sbjct: 499 MEQCQSKGCFINVVNFTTVIHGFSRQGDLESALSLLDDM 537



 Score =  108 bits (271), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 69/287 (24%), Positives = 136/287 (47%), Gaps = 1/287 (0%)

Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLI 402
           AL F   +RR  G   D  TY  ++  L  AR+     +++  M+++GC P+ ++Y  ++
Sbjct: 215 ALEFAERMRR-VGVDPDVVTYNCLIKGLCGARRIVDALEMISSMLQNGCLPDKISYFTVM 273

Query: 403 HSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLS 462
               +   + +  ++ ++M   G  PD+VTY  LI   AK G  D A+   ++ +     
Sbjct: 274 SFLCKEKRVADVQNLLERMSDAGIFPDQVTYNMLIHGLAKHGHADEALSFLRESEGKRFR 333

Query: 463 PDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKL 522
            D   YS  ++     G +  A ++  EM+++GC P++VTY+ ++    +      A K+
Sbjct: 334 VDEVGYSATVHSFCLNGRMAEAKEIIGEMISKGCRPDVVTYSAVVDGFCRIGELDQARKM 393

Query: 523 YRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGK 582
            + M   G +P+ VT++ ++  L   G   EA  +  +   + W P    Y +++  + +
Sbjct: 394 MKHMYKNGCKPNTVTHTALLNGLCKVGKSSEAWELLNKSEEEWWTPSAITYSVVMHGFRR 453

Query: 583 AGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQ 629
            G ++++ +    MLQ G  P     N L+ A     + +DA   ++
Sbjct: 454 EGKLKESCDVVMQMLQKGFFPTTVEINLLIHALCNERKPADAKDFME 500



 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 61/250 (24%), Positives = 100/250 (40%), Gaps = 10/250 (4%)

Query: 502 TYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEM 561
            ++ M+ L ++ R +  A ++ R M   G       ++ +M      G L  A  V   M
Sbjct: 128 VFDEMLVLLSRTRLHDPARRVMRLMIRRGMPRGTRQFAHLMLSYSRAGKLRSAMRVLQLM 187

Query: 562 RRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQL 621
           ++    PD  +  + V++   AG + KA E+ E M + G+ P+V T N L+       ++
Sbjct: 188 QKDGCAPDICICNMAVNVLVVAGRIDKALEFAERMRRVGVDPDVVTYNCLIKGLCGARRI 247

Query: 622 SDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGFCHELMAVSGHPAHMFLLSMP 681
            DA  ++  ML  G  P   +Y  ++S   + +   D+    E M+ +G        +M 
Sbjct: 248 VDALEMISSMLQNGCLPDKISYFTVMSFLCKEKRVADVQNLLERMSDAGIFPDQVTYNML 307

Query: 682 SPGPDGQNVRDHVGSFLEMMHSEDRESKRGLVD-----AVVDFLHKSGLKEEAGSVWEVA 736
             G       D   SFL      + E KR  VD     A V     +G   EA  +    
Sbjct: 308 IHGLAKHGHADEALSFL-----RESEGKRFRVDEVGYSATVHSFCLNGRMAEAKEIIGEM 362

Query: 737 AQKNVYPDAV 746
             K   PD V
Sbjct: 363 ISKGCRPDVV 372



 Score = 42.0 bits (97), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 36/153 (23%), Positives = 65/153 (42%), Gaps = 2/153 (1%)

Query: 370 LGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPD 429
           LGR  +      L+++M+  G  P  VTY  +IH Y     + + L++  +M  +  E  
Sbjct: 556 LGRKGKMKEATSLVEKMLNRGLHPTPVTYRTVIHRYCEKGAVEDLLNLLDKM--LAKEGF 613

Query: 430 RVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFC 489
              Y  +I+     G L  A ++  K+       D  T  ++++     G    ++ + C
Sbjct: 614 SSAYNQVIEKLCAFGKLSEANNLLSKVLRTASKRDAQTCHILMDSFLNRGLPLQSYNVAC 673

Query: 490 EMVNQGCIPNLVTYNIMIALQAKARNYQSALKL 522
            M  +  IP+L     + +  A A   Q+A KL
Sbjct: 674 RMFQRNLIPDLKLCQKVDSQLALAGEKQAAGKL 706



 Score = 39.3 bits (90), Expect = 8.3,   Method: Compositional matrix adjust.
 Identities = 39/146 (26%), Positives = 69/146 (47%), Gaps = 4/146 (2%)

Query: 363 YTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQ 422
           +TT++    R     +   LLD M      P+VVTY  ++ + GR   + EA  + ++M 
Sbjct: 514 FTTVIHGFSRQGDLESALSLLDDMYLTNRHPDVVTYTVVVDALGRKGKMKEATSLVEKML 573

Query: 423 VVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAA-GLSPDTFTYSVIINCLGKAGHL 481
             G  P  VTY T+I  + + G ++  +++  KM A  G S     Y+ +I  L   G L
Sbjct: 574 NRGLHPTPVTYRTVIHRYCEKGAVEDLLNLLDKMLAKEGFSS---AYNQVIEKLCAFGKL 630

Query: 482 QAAHQLFCEMVNQGCIPNLVTYNIMI 507
             A+ L  +++      +  T +I++
Sbjct: 631 SEANNLLSKVLRTASKRDAQTCHILM 656


>gi|21686921|gb|AAK71569.2|AC087852_29 putative reverse transcriptase [Oryza sativa Japonica Group]
          Length = 1833

 Score =  159 bits (402), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 110/390 (28%), Positives = 184/390 (47%), Gaps = 5/390 (1%)

Query: 339  DHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTY 398
            D   A GFF W+  Q G+ H   +Y  MV ILG+ +QF  +  L++QMV  G   +++T 
Sbjct: 1424 DWVAAFGFFMWVGTQGGYCHCADSYDLMVDILGKFKQFDLMWGLINQMVEVGGLMSLMTM 1483

Query: 399  NRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQA 458
             +++     A+   EA+D F +M   G   D      L+D   K   +  A  ++++++ 
Sbjct: 1484 TKVMRRLAGASRWTEAIDAFHKMDRFGVVKDTKAMNVLLDTLCKERSVKRARGVFQELRG 1543

Query: 459  AGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQS 518
              + PD  +++ +++   KA  L+ A     EM   G  P++VTY  ++      +++Q+
Sbjct: 1544 T-IPPDENSFNTLVHGWCKARMLKEALDTMEEMKQHGFSPSVVTYTSLVEAYCMEKDFQT 1602

Query: 519  ALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVD 578
               L  +M+     P+ VTY+I+M  LG  G   EA   F +++     PD   Y  L+ 
Sbjct: 1603 VYALLDEMRKRRCPPNVVTYTILMHALGKAGRTREALDTFDKLKEDGVAPDASFYNSLIY 1662

Query: 579  LWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKP 638
            + G+AG +  A+   E M   G+ PNV T N+L+SA     Q  +A  LL  M      P
Sbjct: 1663 ILGRAGRLEDAYSVVEEMRTTGIAPNVTTFNTLISAACDHSQAENALKLLVKMEEQSCNP 1722

Query: 639  SLQTYTLLLSCCTEARSPYDMGF--CHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGS 696
             ++TYT LL  C + +    + F  CH            + L +     +G+  +  +  
Sbjct: 1723 DIKTYTPLLKLCCKRQWVKILLFLVCHMFRKDISPDFSTYTLLVSWLCRNGKVAQSCL-- 1780

Query: 697  FLEMMHSEDRESKRGLVDAVVDFLHKSGLK 726
            FLE M S+    K+   D V++ L K  L+
Sbjct: 1781 FLEEMVSKGFAPKQETFDLVMEKLEKRNLQ 1810


>gi|168062855|ref|XP_001783392.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162665090|gb|EDQ51786.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 540

 Score =  159 bits (402), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 88/317 (27%), Positives = 160/317 (50%)

Query: 337 LQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVV 396
           + +  V++ F+ W++ Q GF+   H Y      L R +++ A+  L+D+M+   C P++ 
Sbjct: 1   MYNRQVSVEFYKWVKSQDGFEPHFHLYVAFAHCLMRVQKWVALEILVDEMIGKNCPPDIK 60

Query: 397 TYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKM 456
            Y  +I           A   F +M+++GC PD V Y  LI  + K G    AM  + ++
Sbjct: 61  FYALVIKEAINTGRFQTAQHWFSKMKLLGCPPDIVIYNILILEYGKRGNFSQAMKYFSQL 120

Query: 457 QAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNY 516
           +  GL PD+ TY  +++   K G++   ++   EM   G  P+ V Y+I+I +  KA  +
Sbjct: 121 KDEGLLPDSGTYCAVLSACRKVGNIDKGNETLKEMREAGIKPDQVAYSILIDMFGKAGRH 180

Query: 517 QSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLL 576
           + A   +R++Q +G+ PD V Y+ ++      G +D+A  VF E +R   + D  ++  +
Sbjct: 181 EDAAATFRELQMSGYLPDSVAYNTLIHAFAKVGMVDQATLVFKEAQRSFCLDDPVIFYTM 240

Query: 577 VDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGL 636
           + ++ KA    +A    + M + GL+PN     S+L+AF+R  Q   A  L + M     
Sbjct: 241 IQVYAKARMADQALHVLKLMKEIGLQPNELGYGSVLNAFMRANQPMGAIKLFEEMQESNC 300

Query: 637 KPSLQTYTLLLSCCTEA 653
           +    TY  +L+  ++A
Sbjct: 301 RFGESTYITMLNVYSKA 317



 Score =  148 bits (373), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 89/319 (27%), Positives = 161/319 (50%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           R+AG K D+  Y+ ++ + G+A +         ++   G  P+ V YN LIH++ +   +
Sbjct: 156 REAGIKPDQVAYSILIDMFGKAGRHEDAAATFRELQMSGYLPDSVAYNTLIHAFAKVGMV 215

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
           ++A  VFK+ Q   C  D V + T+I ++AKA   D A+ + K M+  GL P+   Y  +
Sbjct: 216 DQATLVFKEAQRSFCLDDPVIFYTMIQVYAKARMADQALHVLKLMKEIGLQPNELGYGSV 275

Query: 472 INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF 531
           +N   +A     A +LF EM    C     TY  M+ + +KA  + +A +L   M+  GF
Sbjct: 276 LNAFMRANQPMGAIKLFEEMQESNCRFGESTYITMLNVYSKAGFHSAAEELLAKMRQLGF 335

Query: 532 EPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWE 591
             + V YS ++++ G  G L EA  +F+ M+++    +  VY  ++D++GKAG +  A  
Sbjct: 336 RRNVVAYSTLIDMYGKVGKLQEATRLFSTMKQQGCKGNLIVYNTMLDMYGKAGRINDAER 395

Query: 592 WYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCT 651
               +  + L P+  T  +L++A+ R+G+  +   + +     GLK       ++++   
Sbjct: 396 LMAELKDSKLVPDTVTYTTLINAYNRLGRFEECIRVFEQHRADGLKLDRILVAIMINVYG 455

Query: 652 EARSPYDMGFCHELMAVSG 670
           +AR    +    E+M  SG
Sbjct: 456 KARQYSKLAELLEVMPKSG 474



 Score =  147 bits (372), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 81/277 (29%), Positives = 142/277 (51%)

Query: 359 DEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVF 418
           D   + TM+ +  +AR       +L  M   G QPN + Y  +++++ RAN    A+ +F
Sbjct: 233 DPVIFYTMIQVYAKARMADQALHVLKLMKEIGLQPNELGYGSVLNAFMRANQPMGAIKLF 292

Query: 419 KQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKA 478
           ++MQ   C     TY T++++++KAGF   A ++  KM+  G   +   YS +I+  GK 
Sbjct: 293 EEMQESNCRFGESTYITMLNVYSKAGFHSAAEELLAKMRQLGFRRNVVAYSTLIDMYGKV 352

Query: 479 GHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTY 538
           G LQ A +LF  M  QGC  NL+ YN M+ +  KA     A +L  +++++   PD VTY
Sbjct: 353 GKLQEATRLFSTMKQQGCKGNLIVYNTMLDMYGKAGRINDAERLMAELKDSKLVPDTVTY 412

Query: 539 SIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQ 598
           + ++      G  +E   VF + R      D  +  ++++++GKA    K  E  E M +
Sbjct: 413 TTLINAYNRLGRFEECIRVFEQHRADGLKLDRILVAIMINVYGKARQYSKLAELLEVMPK 472

Query: 599 AGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLG 635
           +G++P+     +++  +   G   +A  LL+ +  LG
Sbjct: 473 SGIQPDTRILKTVVEIYEDGGMCENAAELLRKINELG 509



 Score =  107 bits (266), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 64/213 (30%), Positives = 110/213 (51%), Gaps = 4/213 (1%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           +++  +  E TY TM+ +  +A    A  +LL +M + G + NVV Y+ LI  YG+   L
Sbjct: 296 QESNCRFGESTYITMLNVYSKAGFHSAAEELLAKMRQLGFRRNVVAYSTLIDMYGKVGKL 355

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
            EA  +F  M+  GC+ + + Y T++D++ KAG ++ A  +  +++ + L PDT TY+ +
Sbjct: 356 QEATRLFSTMKQQGCKGNLIVYNTMLDMYGKAGRINDAERLMAELKDSKLVPDTVTYTTL 415

Query: 472 INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF 531
           IN   + G  +   ++F +    G   + +   IMI +  KAR Y    +L   M  +G 
Sbjct: 416 INAYNRLGRFEECIRVFEQHRADGLKLDRILVAIMINVYGKARQYSKLAELLEVMPKSGI 475

Query: 532 EPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRK 564
           +PD      V+E+    G  + A    AE+ RK
Sbjct: 476 QPDTRILKTVVEIYEDGGMCENA----AELLRK 504



 Score = 99.4 bits (246), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 59/252 (23%), Positives = 122/252 (48%), Gaps = 2/252 (0%)

Query: 350 LRRQAGFKHDEHTYTTMVGILGRARQ-FGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRA 408
           L ++ G + +E  Y +++    RA Q  GAI KL ++M    C+    TY  +++ Y +A
Sbjct: 259 LMKEIGLQPNELGYGSVLNAFMRANQPMGAI-KLFEEMQESNCRFGESTYITMLNVYSKA 317

Query: 409 NYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTY 468
            + + A ++  +M+ +G   + V Y TLID++ K G L  A  ++  M+  G   +   Y
Sbjct: 318 GFHSAAEELLAKMRQLGFRRNVVAYSTLIDMYGKVGKLQEATRLFSTMKQQGCKGNLIVY 377

Query: 469 SVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQN 528
           + +++  GKAG +  A +L  E+ +   +P+ VTY  +I    +   ++  ++++   + 
Sbjct: 378 NTMLDMYGKAGRINDAERLMAELKDSKLVPDTVTYTTLINAYNRLGRFEECIRVFEQHRA 437

Query: 529 AGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRK 588
            G + D++  +I++ V G      +   +   M +    PD  +   +V+++   G    
Sbjct: 438 DGLKLDRILVAIMINVYGKARQYSKLAELLEVMPKSGIQPDTRILKTVVEIYEDGGMCEN 497

Query: 589 AWEWYEAMLQAG 600
           A E    + + G
Sbjct: 498 AAELLRKINELG 509



 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 50/225 (22%), Positives = 92/225 (40%), Gaps = 36/225 (16%)

Query: 448 VAMDMYKKMQAA-GLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIM 506
           V+++ YK +++  G  P    Y    +CL +     A   L  EM+ + C          
Sbjct: 6   VSVEFYKWVKSQDGFEPHFHLYVAFAHCLMRVQKWVALEILVDEMIGKNC---------- 55

Query: 507 IALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNW 566
                                     PD   Y++V++   + G    A+  F++M+    
Sbjct: 56  -------------------------PPDIKFYALVIKEAINTGRFQTAQHWFSKMKLLGC 90

Query: 567 VPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYH 626
            PD  +Y +L+  +GK GN  +A +++  +   GL P+  T  ++LSA  +VG +     
Sbjct: 91  PPDIVIYNILILEYGKRGNFSQAMKYFSQLKDEGLLPDSGTYCAVLSACRKVGNIDKGNE 150

Query: 627 LLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGFCHELMAVSGH 671
            L+ M   G+KP    Y++L+    +A    D       + +SG+
Sbjct: 151 TLKEMREAGIKPDQVAYSILIDMFGKAGRHEDAAATFRELQMSGY 195


>gi|255572227|ref|XP_002527053.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223533615|gb|EEF35353.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 677

 Score =  159 bits (402), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 91/306 (29%), Positives = 157/306 (51%), Gaps = 1/306 (0%)

Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLI 402
           A G FN +    G   D  TY T++    R   F     +   M+  G  P++++++ LI
Sbjct: 274 AKGVFNEML-SIGLSPDTTTYNTLLVESCRNNNFLEAKDIFSDMLHRGVSPDLISFSSLI 332

Query: 403 HSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLS 462
               R  +L++AL  F+ M+  G  PD V Y  LI+ + + G +  A+++  KM   G +
Sbjct: 333 GVSSRNGHLDQALMYFRDMKTSGLVPDNVIYTILINGYCRNGMMSEALEIRDKMLEQGCA 392

Query: 463 PDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKL 522
            D   Y+ I+N L K   L  A+ LF EMV +G +P+  T+  +I    K  N   AL L
Sbjct: 393 LDVVAYNTILNGLCKKKLLADANALFDEMVERGVVPDFCTFTTLIHGHCKEGNMGKALSL 452

Query: 523 YRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGK 582
           +  M     +PD VTY+I+++       +++A  ++ EM  +   P+   Y +LV+ +  
Sbjct: 453 FGIMTQKNIKPDIVTYNILIDGFCKTTEMEKANELWNEMISRKIFPNHISYAILVNGYCN 512

Query: 583 AGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQT 642
            G V +A+  ++ M++ G++P + TCN+++  + R G LS A   L  M++ G+ P   T
Sbjct: 513 LGFVSEAFRLWDEMIRKGIKPTLVTCNTVIKGYCRSGDLSKADEFLGKMISEGVGPDSIT 572

Query: 643 YTLLLS 648
           Y  L++
Sbjct: 573 YNTLIN 578



 Score =  149 bits (376), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 119/452 (26%), Positives = 207/452 (45%), Gaps = 46/452 (10%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           G K    TY  ++  L +  ++     + ++M+  G  P+  TYN L+    R N   EA
Sbjct: 250 GLKPTLFTYNAVINGLCKKGRYVRAKGVFNEMLSIGLSPDTTTYNTLLVESCRNNNFLEA 309

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
            D+F  M   G  PD +++ +LI + ++ G LD A+  ++ M+ +GL PD   Y+++IN 
Sbjct: 310 KDIFSDMLHRGVSPDLISFSSLIGVSSRNGHLDQALMYFRDMKTSGLVPDNVIYTILING 369

Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPD 534
             + G +  A ++  +M+ QGC  ++V YN ++    K +    A  L+ +M   G  PD
Sbjct: 370 YCRNGMMSEALEIRDKMLEQGCALDVVAYNTILNGLCKKKLLADANALFDEMVERGVVPD 429

Query: 535 KVTYSIVMEVLGHC--GYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEW 592
             T++ ++   GHC  G + +A ++F  M +KN  PD   Y +L+D + K   + KA E 
Sbjct: 430 FCTFTTLIH--GHCKEGNMGKALSLFGIMTQKNIKPDIVTYNILIDGFCKTTEMEKANEL 487

Query: 593 YEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTE 652
           +  M+   + PN  +   L++ +  +G +S+A+ L   M+  G+KP+L T      C T 
Sbjct: 488 WNEMISRKIFPNHISYAILVNGYCNLGFVSEAFRLWDEMIRKGIKPTLVT------CNTV 541

Query: 653 ARSPYDMGFCHELMAVSGH--PAHMFLLSMPSP--GPDGQNVRDHVGSFLEMMHSE---- 704
            +     G+C      SG    A  FL  M S   GPD       +  F++  + +    
Sbjct: 542 IK-----GYCR-----SGDLSKADEFLGKMISEGVGPDSITYNTLINGFVKGEYMDKAFF 591

Query: 705 --DRESKRGLVDAVVDF------LHKSGLKEEAGSVWEVAAQKNVYPDAVKEKGMSYWLI 756
             ++   +GL   VV +        + G  +EA  +     ++ + PD    +     LI
Sbjct: 592 LINKMETKGLQPDVVTYNVILNGFCRQGRMQEAELILRKMIERGIDPD----RSTYTTLI 647

Query: 757 NLHVMSDGTAVIALSRTLAWFRKQMLISGVGP 788
           N +V  D        +    F  +ML  G  P
Sbjct: 648 NGYVSQDNL------KEAFRFHDEMLQRGFVP 673



 Score =  145 bits (365), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 107/456 (23%), Positives = 207/456 (45%), Gaps = 49/456 (10%)

Query: 347 FNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYG 406
           F  LRR+ GF    +   +++G L +        ++ +++ R G + NV T N ++++  
Sbjct: 138 FKILRRK-GFLVSINACNSLLGGLVKMGWVDLAWEVYNEIARSGIELNVYTLNIMVNALC 196

Query: 407 RANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTF 466
           + + +++       M+  G   D VTY TLI+ + + G L  A ++   M   GL P  F
Sbjct: 197 KDHKIDDVKPFLIDMEQKGIFADIVTYNTLINAYCREGLLGEAFEVMNSMSGKGLKPTLF 256

Query: 467 TYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDM 526
           TY+ +IN L K G    A  +F EM++ G  P+  TYN ++    +  N+  A  ++ DM
Sbjct: 257 TYNAVINGLCKKGRYVRAKGVFNEMLSIGLSPDTTTYNTLLVESCRNNNFLEAKDIFSDM 316

Query: 527 QNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNV 586
            + G  PD +++S ++ V    G+LD+A   F +M+    VPD  +Y +L++ + + G +
Sbjct: 317 LHRGVSPDLISFSSLIGVSSRNGHLDQALMYFRDMKTSGLVPDNVIYTILINGYCRNGMM 376

Query: 587 RKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLL 646
            +A E  + ML+ G   +V   N++L+   +   L+DA  L   M+  G+ P   T+T L
Sbjct: 377 SEALEIRDKMLEQGCALDVVAYNTILNGLCKKKLLADANALFDEMVERGVVPDFCTFTTL 436

Query: 647 LSCCTEARSPYDMGFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDR 706
           +            G C E     G    +F +         +N++  + ++         
Sbjct: 437 IH-----------GHCKE--GNMGKALSLFGIMTQ------KNIKPDIVTY--------- 468

Query: 707 ESKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAVKEKGMSYWLINLHVMSDGTA 766
                  + ++D   K+   E+A  +W     + ++P+ +    +     NL  +S+   
Sbjct: 469 -------NILIDGFCKTTEMEKANELWNEMISRKIFPNHISYAILVNGYCNLGFVSEAFR 521

Query: 767 VIALSRTLAWFRKQMLISGVGPSRI---DIVTGWGR 799
           +        W   +M+  G+ P+ +    ++ G+ R
Sbjct: 522 L--------W--DEMIRKGIKPTLVTCNTVIKGYCR 547



 Score =  142 bits (358), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 87/308 (28%), Positives = 157/308 (50%), Gaps = 5/308 (1%)

Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLI 402
           AL +F  ++  +G   D   YT ++    R        ++ D+M+  GC  +VV YN ++
Sbjct: 344 ALMYFRDMK-TSGLVPDNVIYTILINGYCRNGMMSEALEIRDKMLEQGCALDVVAYNTIL 402

Query: 403 HSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLS 462
           +   +   L +A  +F +M   G  PD  T+ TLI  H K G +  A+ ++  M    + 
Sbjct: 403 NGLCKKKLLADANALFDEMVERGVVPDFCTFTTLIHGHCKEGNMGKALSLFGIMTQKNIK 462

Query: 463 PDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKL 522
           PD  TY+++I+   K   ++ A++L+ EM+++   PN ++Y I++           A +L
Sbjct: 463 PDIVTYNILIDGFCKTTEMEKANELWNEMISRKIFPNHISYAILVNGYCNLGFVSEAFRL 522

Query: 523 YRDMQNAGFEPDKVTYSIVMEVLGHC--GYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLW 580
           + +M   G +P  VT + V++  G+C  G L +A+    +M  +   PD   Y  L++ +
Sbjct: 523 WDEMIRKGIKPTLVTCNTVIK--GYCRSGDLSKADEFLGKMISEGVGPDSITYNTLINGF 580

Query: 581 GKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSL 640
            K   + KA+     M   GL+P+V T N +L+ F R G++ +A  +L+ M+  G+ P  
Sbjct: 581 VKGEYMDKAFFLINKMETKGLQPDVVTYNVILNGFCRQGRMQEAELILRKMIERGIDPDR 640

Query: 641 QTYTLLLS 648
            TYT L++
Sbjct: 641 STYTTLIN 648



 Score =  126 bits (317), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 74/286 (25%), Positives = 141/286 (49%)

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
           + G   D   Y T++  L + +     N L D+MV  G  P+  T+  LIH + +   + 
Sbjct: 388 EQGCALDVVAYNTILNGLCKKKLLADANALFDEMVERGVVPDFCTFTTLIHGHCKEGNMG 447

Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
           +AL +F  M     +PD VTY  LID   K   ++ A +++ +M +  + P+  +Y++++
Sbjct: 448 KALSLFGIMTQKNIKPDIVTYNILIDGFCKTTEMEKANELWNEMISRKIFPNHISYAILV 507

Query: 473 NCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFE 532
           N     G +  A +L+ EM+ +G  P LVT N +I    ++ +   A +    M + G  
Sbjct: 508 NGYCNLGFVSEAFRLWDEMIRKGIKPTLVTCNTVIKGYCRSGDLSKADEFLGKMISEGVG 567

Query: 533 PDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEW 592
           PD +TY+ ++       Y+D+A  +  +M  K   PD   Y ++++ + + G +++A   
Sbjct: 568 PDSITYNTLINGFVKGEYMDKAFFLINKMETKGLQPDVVTYNVILNGFCRQGRMQEAELI 627

Query: 593 YEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKP 638
              M++ G+ P+  T  +L++ ++    L +A+     ML  G  P
Sbjct: 628 LRKMIERGIDPDRSTYTTLINGYVSQDNLKEAFRFHDEMLQRGFVP 673



 Score =  120 bits (301), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 64/252 (25%), Positives = 125/252 (49%)

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
           + G   D  T+TT++    +    G    L   M +   +P++VTYN LI  + +   + 
Sbjct: 423 ERGVVPDFCTFTTLIHGHCKEGNMGKALSLFGIMTQKNIKPDIVTYNILIDGFCKTTEME 482

Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
           +A +++ +M      P+ ++Y  L++ +   GF+  A  ++ +M   G+ P   T + +I
Sbjct: 483 KANELWNEMISRKIFPNHISYAILVNGYCNLGFVSEAFRLWDEMIRKGIKPTLVTCNTVI 542

Query: 473 NCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFE 532
               ++G L  A +   +M+++G  P+ +TYN +I    K      A  L   M+  G +
Sbjct: 543 KGYCRSGDLSKADEFLGKMISEGVGPDSITYNTLINGFVKGEYMDKAFFLINKMETKGLQ 602

Query: 533 PDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEW 592
           PD VTY++++      G + EAE +  +M  +   PD   Y  L++ +    N+++A+ +
Sbjct: 603 PDVVTYNVILNGFCRQGRMQEAELILRKMIERGIDPDRSTYTTLINGYVSQDNLKEAFRF 662

Query: 593 YEAMLQAGLRPN 604
           ++ MLQ G  P+
Sbjct: 663 HDEMLQRGFVPD 674



 Score =  102 bits (253), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 64/228 (28%), Positives = 114/228 (50%), Gaps = 1/228 (0%)

Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLI 402
           AL  F  +  Q   K D  TY  ++    +  +    N+L ++M+     PN ++Y  L+
Sbjct: 449 ALSLFGIMT-QKNIKPDIVTYNILIDGFCKTTEMEKANELWNEMISRKIFPNHISYAILV 507

Query: 403 HSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLS 462
           + Y    +++EA  ++ +M   G +P  VT  T+I  + ++G L  A +   KM + G+ 
Sbjct: 508 NGYCNLGFVSEAFRLWDEMIRKGIKPTLVTCNTVIKGYCRSGDLSKADEFLGKMISEGVG 567

Query: 463 PDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKL 522
           PD+ TY+ +IN   K  ++  A  L  +M  +G  P++VTYN+++    +    Q A  +
Sbjct: 568 PDSITYNTLINGFVKGEYMDKAFFLINKMETKGLQPDVVTYNVILNGFCRQGRMQEAELI 627

Query: 523 YRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDE 570
            R M   G +PD+ TY+ ++        L EA     EM ++ +VPD+
Sbjct: 628 LRKMIERGIDPDRSTYTTLINGYVSQDNLKEAFRFHDEMLQRGFVPDD 675



 Score =  102 bits (253), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 68/258 (26%), Positives = 120/258 (46%)

Query: 391 CQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAM 450
           C  + + ++ LI SY +A  LNE  D FK ++  G         +L+    K G++D+A 
Sbjct: 111 CGVDNLVFDLLIRSYVQARKLNEGTDTFKILRRKGFLVSINACNSLLGGLVKMGWVDLAW 170

Query: 451 DMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQ 510
           ++Y ++  +G+  + +T ++++N L K   +        +M  +G   ++VTYN +I   
Sbjct: 171 EVYNEIARSGIELNVYTLNIMVNALCKDHKIDDVKPFLIDMEQKGIFADIVTYNTLINAY 230

Query: 511 AKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDE 570
            +      A ++   M   G +P   TY+ V+  L   G    A+ VF EM      PD 
Sbjct: 231 CREGLLGEAFEVMNSMSGKGLKPTLFTYNAVINGLCKKGRYVRAKGVFNEMLSIGLSPDT 290

Query: 571 PVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQG 630
             Y  L+    +  N  +A + +  ML  G+ P++ + +SL+    R G L  A    + 
Sbjct: 291 TTYNTLLVESCRNNNFLEAKDIFSDMLHRGVSPDLISFSSLIGVSSRNGHLDQALMYFRD 350

Query: 631 MLNLGLKPSLQTYTLLLS 648
           M   GL P    YT+L++
Sbjct: 351 MKTSGLVPDNVIYTILIN 368


>gi|147833287|emb|CAN77475.1| hypothetical protein VITISV_041111 [Vitis vinifera]
          Length = 1010

 Score =  159 bits (402), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 100/333 (30%), Positives = 157/333 (47%), Gaps = 16/333 (4%)

Query: 359 DEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVF 418
           D  TYT ++    +        K  D+MVRDGC PNVVTY  LIH+Y +A  ++ A ++F
Sbjct: 514 DVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELF 573

Query: 419 KQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDT------------- 465
           + M   GC P+ VTY  LID H K+G ++ A  +Y +M+     PD              
Sbjct: 574 EMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQIYARMRGNADIPDVDMYFKIDDGNIRD 633

Query: 466 ---FTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKL 522
              FTY  +++ L KA  ++ A  L   M  +GC PN + Y+ +I    K      A  +
Sbjct: 634 PNIFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMV 693

Query: 523 YRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGK 582
           +  M   G+ P+  TYS +++ L     LD A  V + M   +  P+  +Y  ++D   K
Sbjct: 694 FTKMSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCK 753

Query: 583 AGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQT 642
            G   +A+     M + G  PNV T  +++  F + G++     L++ M   G  P+  T
Sbjct: 754 VGKTDEAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGAKGCAPNFVT 813

Query: 643 YTLLLSCCTEARSPYDMGFCHELMAVSGHPAHM 675
           Y +L++ C  A    D     + M  +  P HM
Sbjct: 814 YRVLINHCCAAGLLDDAHQLLDEMKQTYWPKHM 846



 Score =  151 bits (381), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 126/474 (26%), Positives = 205/474 (43%), Gaps = 61/474 (12%)

Query: 313 LAEEALGNTNYSMDAYQANQVLKQLQDHTVALGFFNWLRRQAG-------------FKHD 359
           L    + ++ ++MD Y               LG F  L  +AG             FK D
Sbjct: 253 LVHREMSDSGFNMDGY--------------TLGCFVHLLCKAGRWREALALIEKEEFKLD 298

Query: 360 EHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFK 419
              YT M+  L  A  F      L +M    C PNVVTY  L+    R   L     +  
Sbjct: 299 TVIYTQMISGLCEASLFEEAMDFLSRMRSSSCIPNVVTYRILLCGCLRKRQLGRCKRILS 358

Query: 420 QMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAG 479
            M   GC P R  + +LI  + ++G    A  + KKM   G  P    Y+++I   G  G
Sbjct: 359 MMITEGCYPSRRIFNSLIHAYCRSGDYSYAYKLLKKMGDCGCQPGYVVYNILIG--GICG 416

Query: 480 H--------LQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF 531
           +        L+ A + + EM++   + N V  + +      A  ++ A  + R+M + GF
Sbjct: 417 NEKLPSLDVLELAEKAYGEMLDAHVVLNKVNVSNLARCLCGAGKFEKAYSIIREMMSKGF 476

Query: 532 EPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWE 591
            PD  TYS V+ +L +   +D A  +F EM+  + VPD   Y +L+D + K G +++A +
Sbjct: 477 IPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARK 536

Query: 592 WYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCT 651
           W++ M++ G  PNV T  +L+ A+L+  ++S A  L + ML+ G  P++ TYT L+    
Sbjct: 537 WFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALID--G 594

Query: 652 EARSPYDMGFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRD------------------- 692
             +S      C     + G+ A +  + M     DG N+RD                   
Sbjct: 595 HCKSGQIEKACQIYARMRGN-ADIPDVDMYFKIDDG-NIRDPNIFTYGALVDGLCKAHKV 652

Query: 693 -HVGSFLEMMHSEDRESKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDA 745
                 L++M  E  E    + DA++D   K G  +EA  V+   +++   P+ 
Sbjct: 653 KEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPNV 706



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 100/344 (29%), Positives = 159/344 (46%), Gaps = 61/344 (17%)

Query: 363 YTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLI-------------------H 403
           + +++    R+  +    KLL +M   GCQP  V YN LI                    
Sbjct: 372 FNSLIHAYCRSGDYSYAYKLLKKMGDCGCQPGYVVYNILIGGICGNEKLPSLDVLELAEK 431

Query: 404 SYGR----------------------ANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHA 441
           +YG                       A    +A  + ++M   G  PD  TY  +I +  
Sbjct: 432 AYGEMLDAHVVLNKVNVSNLARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLC 491

Query: 442 KAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLV 501
            A  +D A  ++++M++  + PD FTY+++I+   K G LQ A + F EMV  GC PN+V
Sbjct: 492 NASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVV 551

Query: 502 TYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHC--GYLDEAEAVFA 559
           TY  +I    KAR   SA +L+  M + G  P+ VTY+ +++  GHC  G +++A  ++A
Sbjct: 552 TYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALID--GHCKSGQIEKACQIYA 609

Query: 560 EMRRKNWVPD-------------EP---VYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRP 603
            MR    +PD             +P    YG LVD   KA  V++A +  + M   G  P
Sbjct: 610 RMRGNADIPDVDMYFKIDDGNIRDPNIFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEP 669

Query: 604 NVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
           N    ++L+  F +VG+L +A  +   M   G  P++ TY+ L+
Sbjct: 670 NHIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYSSLI 713



 Score =  140 bits (352), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 88/309 (28%), Positives = 148/309 (47%), Gaps = 16/309 (5%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           GF  D  TY+ ++G+L  A +      L ++M  +   P+V TY  LI S+ +   L +A
Sbjct: 475 GFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQA 534

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
              F +M   GC P+ VTY  LI  + KA  +  A ++++ M + G  P+  TY+ +I+ 
Sbjct: 535 RKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDG 594

Query: 475 LGKAGHLQAAHQLFCEM--------------VNQGCI--PNLVTYNIMIALQAKARNYQS 518
             K+G ++ A Q++  M              ++ G I  PN+ TY  ++    KA   + 
Sbjct: 595 HCKSGQIEKACQIYARMRGNADIPDVDMYFKIDDGNIRDPNIFTYGALVDGLCKAHKVKE 654

Query: 519 ALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVD 578
           A  L   M   G EP+ + Y  +++     G LDEA+ VF +M  + + P+   Y  L+D
Sbjct: 655 ARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYSSLID 714

Query: 579 LWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKP 638
              K   +  A +    ML+    PNV     ++    +VG+  +AY L+  M   G  P
Sbjct: 715 RLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVGKTDEAYRLMSMMEEKGCHP 774

Query: 639 SLQTYTLLL 647
           ++ TYT ++
Sbjct: 775 NVVTYTAMI 783



 Score =  129 bits (323), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 91/321 (28%), Positives = 143/321 (44%), Gaps = 35/321 (10%)

Query: 362 TYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQM 421
           TY  +V  L +A +      LLD M  +GC+PN + Y+ LI  + +   L+EA  VF +M
Sbjct: 638 TYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKM 697

Query: 422 QVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHL 481
              G  P+  TY +LID   K   LD+A+ +  +M     +P+   Y+ +I+ L K G  
Sbjct: 698 SERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVGKT 757

Query: 482 QAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIV 541
             A++L   M  +GC PN+VTY  MI    KA      L+L R M   G  P+ VTY ++
Sbjct: 758 DEAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGAKGCAPNFVTYRVL 817

Query: 542 MEVLGHCGYLDEAEAVFAEMRRKNW---------------------------------VP 568
           +      G LD+A  +  EM++  W                                 VP
Sbjct: 818 INHCCAAGLLDDAHQLLDEMKQTYWPKHMAGYRKVIEGFNREFIISLGLLDEIAENVAVP 877

Query: 569 DEPVYGLLVDLWGKAGNVRKAWEWYEAM--LQAGLRPNVPTCNSLLSAFLRVGQLSDAYH 626
             P Y +L+D + KAG +  A E ++ M    +    +    +SL+ +     ++  A+ 
Sbjct: 878 IIPAYRILIDSFCKAGRLELALELHKXMSSCTSYSAADKDLYSSLIESLSLASKVDKAFE 937

Query: 627 LLQGMLNLGLKPSLQTYTLLL 647
           L   M+  G  P L  +  L+
Sbjct: 938 LYADMIKRGGIPELSIFFYLV 958



 Score =  119 bits (298), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 92/354 (25%), Positives = 143/354 (40%), Gaps = 84/354 (23%)

Query: 362 TYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLI------------------- 402
           TYT ++    +AR+  + N+L + M+ +GC PNVVTY  LI                   
Sbjct: 552 TYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQIYARM 611

Query: 403 -------------------------HSYG-------RANYLNEALDVFKQMQVVGCEPDR 430
                                     +YG       +A+ + EA D+   M V GCEP+ 
Sbjct: 612 RGNADIPDVDMYFKIDDGNIRDPNIFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNH 671

Query: 431 VTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCE 490
           + Y  LID   K G LD A  ++ KM   G  P+ +TYS +I+ L K   L  A ++   
Sbjct: 672 IVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSR 731

Query: 491 MVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGY 550
           M+   C PN++ Y  MI    K      A +L   M+  G  P+ VTY+ +++  G  G 
Sbjct: 732 MLENSCAPNVIIYTEMIDGLCKVGKTDEAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGK 791

Query: 551 LDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQ-------AGLR- 602
           +D+   +  +M  K   P+   Y +L++    AG +  A +  + M Q       AG R 
Sbjct: 792 VDKCLELMRQMGAKGCAPNFVTYRVLINHCCAAGLLDDAHQLLDEMKQTYWPKHMAGYRK 851

Query: 603 -------------------------PNVPTCNSLLSAFLRVGQLSDAYHLLQGM 631
                                    P +P    L+ +F + G+L  A  L + M
Sbjct: 852 VIEGFNREFIISLGLLDEIAENVAVPIIPAYRILIDSFCKAGRLELALELHKXM 905



 Score =  108 bits (271), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 72/270 (26%), Positives = 129/270 (47%), Gaps = 4/270 (1%)

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
           + G+  + +TY++++  L + ++     K+L +M+ + C PNV+ Y  +I    +    +
Sbjct: 699 ERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVGKTD 758

Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
           EA  +   M+  GC P+ VTY  +ID   KAG +D  +++ ++M A G +P+  TY V+I
Sbjct: 759 EAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGAKGCAPNFVTYRVLI 818

Query: 473 NCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFE 532
           N    AG L  AHQL  EM       ++  Y  +I  +   R +  +L L  ++      
Sbjct: 819 NHCCAAGLLDDAHQLLDEMKQTYWPKHMAGYRKVI--EGFNREFIISLGLLDEIAENVAV 876

Query: 533 PDKVTYSIVMEVLGHCGYLDEAEAVFAEMRR--KNWVPDEPVYGLLVDLWGKAGNVRKAW 590
           P    Y I+++     G L+ A  +   M         D+ +Y  L++    A  V KA+
Sbjct: 877 PIIPAYRILIDSFCKAGRLELALELHKXMSSCTSYSAADKDLYSSLIESLSLASKVDKAF 936

Query: 591 EWYEAMLQAGLRPNVPTCNSLLSAFLRVGQ 620
           E Y  M++ G  P +     L+   +R+ +
Sbjct: 937 ELYADMIKRGGIPELSIFFYLVKGLIRINR 966


>gi|255541126|ref|XP_002511627.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223548807|gb|EEF50296.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 1163

 Score =  159 bits (402), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 102/325 (31%), Positives = 167/325 (51%), Gaps = 12/325 (3%)

Query: 332 QVLKQLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDG- 390
           +VL+ ++  + AL FFNW   + GF H++ +Y  M+ ILGRAR        L  + R   
Sbjct: 91  EVLRLIKTPSKALQFFNW-APELGFTHNDQSYFLMLEILGRARNLNVARNFLFSIKRRSN 149

Query: 391 --CQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDV 448
              +     +N LI SYG+A    E++ VF  M+ VG  P  VT+ +L+ I  K G  ++
Sbjct: 150 GTVKLEDRFFNSLIRSYGKAGLFQESVQVFNSMKSVGVSPSVVTFNSLLLILLKRGRTNM 209

Query: 449 AMDMYKKMQAA-GLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMI 507
           A  ++ +M +  G++PDT+T++++I    K   +    + F EM    C P+LVTYN ++
Sbjct: 210 AQSVFDEMLSTYGVTPDTYTFNILIRGFCKNSMVDEGFRFFKEMSRFKCDPDLVTYNTLV 269

Query: 508 ALQAKARNYQSALKLYRDM--QNAGFEPDKVTYSIVMEVLGHC--GYLDEAEAVFAEMRR 563
               +A     A  +   M  ++    PD VTY+ +  V G+C    +DEA  VF EM  
Sbjct: 270 DGLCRAGKVNIAHNVVNGMVKKSTNLNPDVVTYTTL--VRGYCMKHEIDEALVVFEEMVS 327

Query: 564 KNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAML-QAGLRPNVPTCNSLLSAFLRVGQLS 622
           K   P+E  Y  L+    +   + K  + +E  L   G  P+  T N+L++A    G L+
Sbjct: 328 KGLKPNEITYNTLIKGLCEVQKIDKIKQIFEGALGGGGFIPDTCTLNTLMNAHCNAGNLN 387

Query: 623 DAYHLLQGMLNLGLKPSLQTYTLLL 647
           DA  + + M+ L ++P   TY++L+
Sbjct: 388 DALEVFEKMMVLNVRPDSATYSVLI 412



 Score =  124 bits (311), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 97/384 (25%), Positives = 176/384 (45%), Gaps = 54/384 (14%)

Query: 315 EEALGNTNYSMDAYQANQVLKQLQDHTVALGFFNWLRRQAGFKHDEH--TYTTMVGILGR 372
           +E L     + D Y  N +++    +++    F + +  + FK D    TY T+V  L R
Sbjct: 215 DEMLSTYGVTPDTYTFNILIRGFCKNSMVDEGFRFFKEMSRFKCDPDLVTYNTLVDGLCR 274

Query: 373 ARQFGAINKLLDQMVRDGCQ--PNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDR 430
           A +    + +++ MV+      P+VVTY  L+  Y   + ++EAL VF++M   G +P+ 
Sbjct: 275 AGKVNIAHNVVNGMVKKSTNLNPDVVTYTTLVRGYCMKHEIDEALVVFEEMVSKGLKPNE 334

Query: 431 VTYCTLI------------------------------------DIHAKAGFLDVAMDMYK 454
           +TY TLI                                    + H  AG L+ A+++++
Sbjct: 335 ITYNTLIKGLCEVQKIDKIKQIFEGALGGGGFIPDTCTLNTLMNAHCNAGNLNDALEVFE 394

Query: 455 KMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQ-------GCIPNLVTYNIMI 507
           KM    + PD+ TYSV+I  L + G+ + A QLF E+  +       GC P +  Y  M 
Sbjct: 395 KMMVLNVRPDSATYSVLIRNLCQRGNFERAEQLFDELSEKEILLRDDGCTPLVAAYKSMF 454

Query: 508 ALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHC--GYLDEAEAVFAEMRRKN 565
               +      A +++R +   G + D +++ I+++  GHC  G  +    +   M R++
Sbjct: 455 EFLCRNGKTAKAERVFRQLMKRGTQ-DPLSFKILIK--GHCREGTFEAGYELLVLMLRRD 511

Query: 566 WVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAY 625
           +VPD   Y  L+D   + G    A++  E M+++   P   T +S+L+  L  G   ++ 
Sbjct: 512 FVPDLETYQSLIDGLLQKGEPLVAYQTLEKMIKSSHVPETSTFHSILARLLAKGCAHESA 571

Query: 626 HLLQGMLNLGLKP--SLQTYTLLL 647
             +  ML   ++   +L T+T+ L
Sbjct: 572 RFIMLMLEGKIRQNINLSTHTVRL 595



 Score =  119 bits (297), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 77/303 (25%), Positives = 144/303 (47%), Gaps = 11/303 (3%)

Query: 362 TYTTMVGILGRARQFGAINKLLDQMVRD-GCQPNVVTYNRLIHSYGRANYLNEALDVFKQ 420
           T+ +++ IL +  +      + D+M+   G  P+  T+N LI  + + + ++E    FK+
Sbjct: 193 TFNSLLLILLKRGRTNMAQSVFDEMLSTYGVTPDTYTFNILIRGFCKNSMVDEGFRFFKE 252

Query: 421 MQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKM--QAAGLSPDTFTYSVIINCLGKA 478
           M    C+PD VTY TL+D   +AG +++A ++   M  ++  L+PD  TY+ ++      
Sbjct: 253 MSRFKCDPDLVTYNTLVDGLCRAGKVNIAHNVVNGMVKKSTNLNPDVVTYTTLVRGYCMK 312

Query: 479 GHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRD-MQNAGFEPDKVT 537
             +  A  +F EMV++G  PN +TYN +I    + +      +++   +   GF PD  T
Sbjct: 313 HEIDEALVVFEEMVSKGLKPNEITYNTLIKGLCEVQKIDKIKQIFEGALGGGGFIPDTCT 372

Query: 538 YSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAML 597
            + +M    + G L++A  VF +M   N  PD   Y +L+    + GN  +A + ++ + 
Sbjct: 373 LNTLMNAHCNAGNLNDALEVFEKMMVLNVRPDSATYSVLIRNLCQRGNFERAEQLFDELS 432

Query: 598 QA-------GLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCC 650
           +        G  P V    S+     R G+ + A  + + ++  G +  L    L+   C
Sbjct: 433 EKEILLRDDGCTPLVAAYKSMFEFLCRNGKTAKAERVFRQLMKRGTQDPLSFKILIKGHC 492

Query: 651 TEA 653
            E 
Sbjct: 493 REG 495



 Score = 84.3 bits (207), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 65/249 (26%), Positives = 117/249 (46%), Gaps = 6/249 (2%)

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMY---KKMQAAGLSPDTFTY 468
           ++AL  F     +G   +  +Y  +++I  +A  L+VA +     K+     +  +   +
Sbjct: 100 SKALQFFNWAPELGFTHNDQSYFLMLEILGRARNLNVARNFLFSIKRRSNGTVKLEDRFF 159

Query: 469 SVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQN 528
           + +I   GKAG  Q + Q+F  M + G  P++VT+N ++ +  K      A  ++ +M +
Sbjct: 160 NSLIRSYGKAGLFQESVQVFNSMKSVGVSPSVVTFNSLLLILLKRGRTNMAQSVFDEMLS 219

Query: 529 A-GFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVR 587
             G  PD  T++I++        +DE    F EM R    PD   Y  LVD   +AG V 
Sbjct: 220 TYGVTPDTYTFNILIRGFCKNSMVDEGFRFFKEMSRFKCDPDLVTYNTLVDGLCRAGKVN 279

Query: 588 KAWEWYEAMLQ--AGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTL 645
            A      M++    L P+V T  +L+  +    ++ +A  + + M++ GLKP+  TY  
Sbjct: 280 IAHNVVNGMVKKSTNLNPDVVTYTTLVRGYCMKHEIDEALVVFEEMVSKGLKPNEITYNT 339

Query: 646 LLSCCTEAR 654
           L+    E +
Sbjct: 340 LIKGLCEVQ 348


>gi|77557056|gb|ABA99852.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
          Length = 726

 Score =  159 bits (402), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 101/361 (27%), Positives = 177/361 (49%), Gaps = 6/361 (1%)

Query: 293 STGNVVESVSRILR-QWKWGPLAEEALGNTNYSMDAYQANQVLKQLQ--DHTVALGFFNW 349
           S   +V    R+L  +  W P  E  L +    +   Q   VL+     D   A  FF W
Sbjct: 57  SRSRLVRDTCRLLELRESWSPKLEAQLRHLLRVLSPPQVRAVLRAQARGDVRRAFEFFRW 116

Query: 350 LRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRAN 409
             RQ  ++H    +  M+ +L   R      +++  M+R G +     + +L+ SY RA 
Sbjct: 117 ADRQWRYRHAPEVFDEMLSLLSNTRLHDPARRVVRLMIRRGVRRGTEQFAQLMLSYSRAG 176

Query: 410 YLNEALDVFKQMQVVGCEPDRVTYCTL-IDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTY 468
            L  A+ V   MQ  GC PD ++ C + +++   AG +D A++  ++M+  G+ PD +TY
Sbjct: 177 KLRSAMRVLHLMQKDGCAPD-ISICNMAVNVLVVAGRVDKALEFAERMRRVGVEPDVYTY 235

Query: 469 SVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQN 528
           + +I  L  A  +  A ++   M+  GC P+ ++Y  +++   K +  +    L + M+N
Sbjct: 236 NCLIKGLCGARRVVDAMEMIGVMLQNGCPPDKISYYTVMSFLCKEKRVEEVRGLLQRMRN 295

Query: 529 -AGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVR 587
            AG  PD+VTY++++  L   G+ DEA     E   K +  DE  Y  +V  +   G + 
Sbjct: 296 DAGLFPDQVTYNVLIHGLAKHGHADEALEFLRESEGKRFRVDEVGYSAIVHSFCLNGRMA 355

Query: 588 KAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
           +A E    M+  G +P+V T ++++  F R+G+L  A  +++ M     KP+  T+T LL
Sbjct: 356 EAKEIVGEMISKGCQPDVVTYSTVVDGFCRIGELDQARKMMKHMYKNDCKPNTVTHTALL 415

Query: 648 S 648
           +
Sbjct: 416 N 416



 Score =  108 bits (271), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 74/280 (26%), Positives = 124/280 (44%), Gaps = 1/280 (0%)

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRD-GCQPNVVTYNRLIHSYGRANYL 411
           Q G   D+ +Y T++  L + ++   +  LL +M  D G  P+ VTYN LIH   +  + 
Sbjct: 260 QNGCPPDKISYYTVMSFLCKEKRVEEVRGLLQRMRNDAGLFPDQVTYNVLIHGLAKHGHA 319

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
           +EAL+  ++ +      D V Y  ++      G +  A ++  +M + G  PD  TYS +
Sbjct: 320 DEALEFLRESEGKRFRVDEVGYSAIVHSFCLNGRMAEAKEIVGEMISKGCQPDVVTYSTV 379

Query: 472 INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF 531
           ++   + G L  A ++   M    C PN VT+  ++    K      A +L    +   +
Sbjct: 380 VDGFCRIGELDQARKMMKHMYKNDCKPNTVTHTALLNGLCKVGKTSEAWELLNKSEEEWW 439

Query: 532 EPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWE 591
            P  +TYS+VM      G L E+  V  +M +K + P      LL+    K     +A +
Sbjct: 440 TPSDITYSVVMHGFRREGKLKESCDVVVQMLQKGFFPTTVEINLLIHALCKDRKPAEAKD 499

Query: 592 WYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGM 631
           + E     G   NV    +++  F R G L  A  L+  M
Sbjct: 500 FMEQCQSKGCTINVVNFTTVIHGFSRQGDLESALSLMDDM 539



 Score =  106 bits (265), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 77/296 (26%), Positives = 137/296 (46%), Gaps = 2/296 (0%)

Query: 326 DAYQANQVLKQLQDHTVALGFFNWLRRQAG--FKHDEHTYTTMVGILGRARQFGAINKLL 383
           D    N ++  L  H  A     +LR   G  F+ DE  Y+ +V       +     +++
Sbjct: 302 DQVTYNVLIHGLAKHGHADEALEFLRESEGKRFRVDEVGYSAIVHSFCLNGRMAEAKEIV 361

Query: 384 DQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKA 443
            +M+  GCQP+VVTY+ ++  + R   L++A  + K M    C+P+ VT+  L++   K 
Sbjct: 362 GEMISKGCQPDVVTYSTVVDGFCRIGELDQARKMMKHMYKNDCKPNTVTHTALLNGLCKV 421

Query: 444 GFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTY 503
           G    A ++  K +    +P   TYSV+++   + G L+ +  +  +M+ +G  P  V  
Sbjct: 422 GKTSEAWELLNKSEEEWWTPSDITYSVVMHGFRREGKLKESCDVVVQMLQKGFFPTTVEI 481

Query: 504 NIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRR 563
           N++I    K R    A       Q+ G   + V ++ V+      G L+ A ++  +M  
Sbjct: 482 NLLIHALCKDRKPAEAKDFMEQCQSKGCTINVVNFTTVIHGFSRQGDLESALSLMDDMYL 541

Query: 564 KNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVG 619
            N  PD   Y ++VD  GK G +++A    E ML  G+ P   T  +++  +   G
Sbjct: 542 SNRHPDVVTYTVVVDALGKKGRLKEATGLVEKMLNRGVLPTPVTYRTVIHRYCEKG 597



 Score = 43.1 bits (100), Expect = 0.71,   Method: Compositional matrix adjust.
 Identities = 30/136 (22%), Positives = 57/136 (41%)

Query: 537 TYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAM 596
            +  ++ +L +    D A  V   M R+        +  L+  + +AG +R A      M
Sbjct: 129 VFDEMLSLLSNTRLHDPARRVVRLMIRRGVRRGTEQFAQLMLSYSRAGKLRSAMRVLHLM 188

Query: 597 LQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSP 656
            + G  P++  CN  ++  +  G++  A    + M  +G++P + TY  L+     AR  
Sbjct: 189 QKDGCAPDISICNMAVNVLVVAGRVDKALEFAERMRRVGVEPDVYTYNCLIKGLCGARRV 248

Query: 657 YDMGFCHELMAVSGHP 672
            D      +M  +G P
Sbjct: 249 VDAMEMIGVMLQNGCP 264


>gi|449446121|ref|XP_004140820.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g09680-like [Cucumis sativus]
          Length = 590

 Score =  159 bits (402), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 91/302 (30%), Positives = 156/302 (51%), Gaps = 1/302 (0%)

Query: 346 FFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSY 405
            FN +R++ G +    ++ T++  L ++R      +L   M  +   P+V TY+ LIH  
Sbjct: 245 IFNEIRKR-GLRPTTVSFNTLINGLCKSRNLDEGFRLKKTMEENRIYPDVFTYSVLIHGL 303

Query: 406 GRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDT 465
            +   L+ A  +F +MQ  G  P+ +T+  LID   ++  +D AM+ Y +M   G+ PD 
Sbjct: 304 CKEGRLDVAEQLFDEMQQRGLRPNGITFTALIDGQCRSRRIDSAMNTYHQMLTMGVKPDL 363

Query: 466 FTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRD 525
             Y+ ++N L K G +  A +L  EM   G  P+ +TY  +I    K  + +SA+++ + 
Sbjct: 364 VMYNTLLNGLCKVGDVNKARKLVDEMRMVGMKPDKITYTTLIDGYCKEGDLESAMEIRKG 423

Query: 526 MQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGN 585
           M   G   D V ++ ++      G + +AE    EM      PD+  Y +++D + K GN
Sbjct: 424 MNEEGVVLDNVAFTALISGFCRDGRVRDAERTLREMVEAGMKPDDATYTMVIDGYCKKGN 483

Query: 586 VRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTL 645
           V+  ++  + M   G +P V T N L++   + GQ+ +A  LL+ MLNLG+ P   TY +
Sbjct: 484 VKMGFKLLKEMQINGHKPGVITYNVLMNGLCKQGQMKNANMLLEAMLNLGVTPDDITYNI 543

Query: 646 LL 647
           LL
Sbjct: 544 LL 545



 Score =  152 bits (384), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 97/318 (30%), Positives = 161/318 (50%), Gaps = 2/318 (0%)

Query: 385 QMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAG 444
           +++  G  P V  YN LI+ + +   + +A  +F +++  G  P  V++ TLI+   K+ 
Sbjct: 213 EILEYGFPPKVQYYNILINKFCKEGSIRDAKLIFNEIRKRGLRPTTVSFNTLINGLCKSR 272

Query: 445 FLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYN 504
            LD    + K M+   + PD FTYSV+I+ L K G L  A QLF EM  +G  PN +T+ 
Sbjct: 273 NLDEGFRLKKTMEENRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRGLRPNGITFT 332

Query: 505 IMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRK 564
            +I  Q ++R   SA+  Y  M   G +PD V Y+ ++  L   G +++A  +  EMR  
Sbjct: 333 ALIDGQCRSRRIDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNKARKLVDEMRMV 392

Query: 565 NWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDA 624
              PD+  Y  L+D + K G++  A E  + M + G+  +     +L+S F R G++ DA
Sbjct: 393 GMKPDKITYTTLIDGYCKEGDLESAMEIRKGMNEEGVVLDNVAFTALISGFCRDGRVRDA 452

Query: 625 YHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGF-CHELMAVSGHPAHMFLLSMPSP 683
              L+ M+  G+KP   TYT+++    + +    MGF   + M ++GH   +   ++   
Sbjct: 453 ERTLREMVEAGMKPDDATYTMVIDGYCK-KGNVKMGFKLLKEMQINGHKPGVITYNVLMN 511

Query: 684 GPDGQNVRDHVGSFLEMM 701
           G   Q    +    LE M
Sbjct: 512 GLCKQGQMKNANMLLEAM 529



 Score =  124 bits (310), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 75/264 (28%), Positives = 136/264 (51%), Gaps = 3/264 (1%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           +Q G + +  T+T ++    R+R+  +      QM+  G +P++V YN L++   +   +
Sbjct: 320 QQRGLRPNGITFTALIDGQCRSRRIDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDV 379

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
           N+A  +  +M++VG +PD++TY TLID + K G L+ AM++ K M   G+  D   ++ +
Sbjct: 380 NKARKLVDEMRMVGMKPDKITYTTLIDGYCKEGDLESAMEIRKGMNEEGVVLDNVAFTAL 439

Query: 472 INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF 531
           I+   + G ++ A +   EMV  G  P+  TY ++I    K  N +   KL ++MQ  G 
Sbjct: 440 ISGFCRDGRVRDAERTLREMVEAGMKPDDATYTMVIDGYCKKGNVKMGFKLLKEMQINGH 499

Query: 532 EPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWE 591
           +P  +TY+++M  L   G +  A  +   M      PD+  Y +L++   K G   KA +
Sbjct: 500 KPGVITYNVLMNGLCKQGQMKNANMLLEAMLNLGVTPDDITYNILLEGHCKNG---KAED 556

Query: 592 WYEAMLQAGLRPNVPTCNSLLSAF 615
             +   + GL  +     SL+S +
Sbjct: 557 LLKLRNEKGLIVDYAYYTSLVSEY 580



 Score = 47.0 bits (110), Expect = 0.051,   Method: Compositional matrix adjust.
 Identities = 31/136 (22%), Positives = 60/136 (44%), Gaps = 1/136 (0%)

Query: 526 MQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGN 585
           +  AG       +  +M      G++ +A   F  +R  N+       G L+D    + +
Sbjct: 144 LDTAGTRCSNFVFDALMIAYWDSGFVSDAIQCFRLVRNSNFQIPFHGCGYLLDKMINSNS 203

Query: 586 VRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTL 645
               W +Y  +L+ G  P V   N L++ F + G + DA  +   +   GL+P+  ++  
Sbjct: 204 PVTIWTFYSEILEYGFPPKVQYYNILINKFCKEGSIRDAKLIFNEIRKRGLRPTTVSFNT 263

Query: 646 LLSCCTEARSPYDMGF 661
           L++   ++R+  D GF
Sbjct: 264 LINGLCKSRN-LDEGF 278


>gi|225433790|ref|XP_002269080.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
           mitochondrial-like [Vitis vinifera]
          Length = 1045

 Score =  159 bits (402), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 100/333 (30%), Positives = 157/333 (47%), Gaps = 16/333 (4%)

Query: 359 DEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVF 418
           D  TYT ++    +        K  D+MVRDGC PNVVTY  LIH+Y +A  ++ A ++F
Sbjct: 514 DVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELF 573

Query: 419 KQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDT------------- 465
           + M   GC P+ VTY  LID H K+G ++ A  +Y +M+     PD              
Sbjct: 574 EMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQIYARMRGNADIPDVDMYFKIDDGNIRD 633

Query: 466 ---FTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKL 522
              FTY  +++ L KA  ++ A  L   M  +GC PN + Y+ +I    K      A  +
Sbjct: 634 PNIFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMV 693

Query: 523 YRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGK 582
           +  M   G+ P+  TYS +++ L     LD A  V + M   +  P+  +Y  ++D   K
Sbjct: 694 FTKMSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCK 753

Query: 583 AGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQT 642
            G   +A+     M + G  PNV T  +++  F + G++     L++ M   G  P+  T
Sbjct: 754 VGKTDEAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGAKGCAPNFVT 813

Query: 643 YTLLLSCCTEARSPYDMGFCHELMAVSGHPAHM 675
           Y +L++ C  A    D     + M  +  P HM
Sbjct: 814 YRVLINHCCAAGLLDDAHQLLDEMKQTYWPKHM 846



 Score =  150 bits (380), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 126/474 (26%), Positives = 205/474 (43%), Gaps = 61/474 (12%)

Query: 313 LAEEALGNTNYSMDAYQANQVLKQLQDHTVALGFFNWLRRQAG-------------FKHD 359
           L    + ++ ++MD Y               LG F  L  +AG             FK D
Sbjct: 253 LVHREMSDSGFNMDGY--------------TLGCFVHLLCKAGRWREALALIEKEEFKLD 298

Query: 360 EHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFK 419
              YT M+  L  A  F      L +M    C PNVVTY  L+    R   L     +  
Sbjct: 299 TVIYTQMISGLCEASLFEEAMDFLSRMRSSSCIPNVVTYRILLCGCLRKRQLGRCKRILS 358

Query: 420 QMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAG 479
            M   GC P R  + +LI  + ++G    A  + KKM   G  P    Y+++I   G  G
Sbjct: 359 MMITEGCYPSRRIFNSLIHAYCRSGDYSYAYKLLKKMGDCGCQPGYVVYNILIG--GICG 416

Query: 480 H--------LQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF 531
           +        L+ A + + EM++   + N V  + +      A  ++ A  + R+M + GF
Sbjct: 417 NEKLPSLDVLELAEKAYGEMLDAHVVLNKVNVSNLARCLCGAGKFEKAYSIIREMMSKGF 476

Query: 532 EPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWE 591
            PD  TYS V+ +L +   +D A  +F EM+  + VPD   Y +L+D + K G +++A +
Sbjct: 477 IPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARK 536

Query: 592 WYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCT 651
           W++ M++ G  PNV T  +L+ A+L+  ++S A  L + ML+ G  P++ TYT L+    
Sbjct: 537 WFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALID--G 594

Query: 652 EARSPYDMGFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRD------------------- 692
             +S      C     + G+ A +  + M     DG N+RD                   
Sbjct: 595 HCKSGQIEKACQIYARMRGN-ADIPDVDMYFKIDDG-NIRDPNIFTYGALVDGLCKAHKV 652

Query: 693 -HVGSFLEMMHSEDRESKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDA 745
                 L++M  E  E    + DA++D   K G  +EA  V+   +++   P+ 
Sbjct: 653 KEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPNV 706



 Score =  140 bits (353), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 100/344 (29%), Positives = 159/344 (46%), Gaps = 61/344 (17%)

Query: 363 YTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLI-------------------H 403
           + +++    R+  +    KLL +M   GCQP  V YN LI                    
Sbjct: 372 FNSLIHAYCRSGDYSYAYKLLKKMGDCGCQPGYVVYNILIGGICGNEKLPSLDVLELAEK 431

Query: 404 SYGR----------------------ANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHA 441
           +YG                       A    +A  + ++M   G  PD  TY  +I +  
Sbjct: 432 AYGEMLDAHVVLNKVNVSNLARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLC 491

Query: 442 KAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLV 501
            A  +D A  ++++M++  + PD FTY+++I+   K G LQ A + F EMV  GC PN+V
Sbjct: 492 NASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVV 551

Query: 502 TYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHC--GYLDEAEAVFA 559
           TY  +I    KAR   SA +L+  M + G  P+ VTY+ +++  GHC  G +++A  ++A
Sbjct: 552 TYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALID--GHCKSGQIEKACQIYA 609

Query: 560 EMRRKNWVPD-------------EP---VYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRP 603
            MR    +PD             +P    YG LVD   KA  V++A +  + M   G  P
Sbjct: 610 RMRGNADIPDVDMYFKIDDGNIRDPNIFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEP 669

Query: 604 NVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
           N    ++L+  F +VG+L +A  +   M   G  P++ TY+ L+
Sbjct: 670 NHIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYSSLI 713



 Score =  139 bits (351), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 88/309 (28%), Positives = 148/309 (47%), Gaps = 16/309 (5%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           GF  D  TY+ ++G+L  A +      L ++M  +   P+V TY  LI S+ +   L +A
Sbjct: 475 GFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQA 534

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
              F +M   GC P+ VTY  LI  + KA  +  A ++++ M + G  P+  TY+ +I+ 
Sbjct: 535 RKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDG 594

Query: 475 LGKAGHLQAAHQLFCEM--------------VNQGCI--PNLVTYNIMIALQAKARNYQS 518
             K+G ++ A Q++  M              ++ G I  PN+ TY  ++    KA   + 
Sbjct: 595 HCKSGQIEKACQIYARMRGNADIPDVDMYFKIDDGNIRDPNIFTYGALVDGLCKAHKVKE 654

Query: 519 ALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVD 578
           A  L   M   G EP+ + Y  +++     G LDEA+ VF +M  + + P+   Y  L+D
Sbjct: 655 ARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYSSLID 714

Query: 579 LWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKP 638
              K   +  A +    ML+    PNV     ++    +VG+  +AY L+  M   G  P
Sbjct: 715 RLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVGKTDEAYRLMSMMEEKGCHP 774

Query: 639 SLQTYTLLL 647
           ++ TYT ++
Sbjct: 775 NVVTYTAMI 783



 Score =  128 bits (322), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 91/321 (28%), Positives = 143/321 (44%), Gaps = 35/321 (10%)

Query: 362 TYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQM 421
           TY  +V  L +A +      LLD M  +GC+PN + Y+ LI  + +   L+EA  VF +M
Sbjct: 638 TYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKM 697

Query: 422 QVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHL 481
              G  P+  TY +LID   K   LD+A+ +  +M     +P+   Y+ +I+ L K G  
Sbjct: 698 SERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVGKT 757

Query: 482 QAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIV 541
             A++L   M  +GC PN+VTY  MI    KA      L+L R M   G  P+ VTY ++
Sbjct: 758 DEAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGAKGCAPNFVTYRVL 817

Query: 542 MEVLGHCGYLDEAEAVFAEMRRKNW---------------------------------VP 568
           +      G LD+A  +  EM++  W                                 VP
Sbjct: 818 INHCCAAGLLDDAHQLLDEMKQTYWPKHMAGYRKVIEGFNREFIISLGLLDEIAENVAVP 877

Query: 569 DEPVYGLLVDLWGKAGNVRKAWEWYEAM--LQAGLRPNVPTCNSLLSAFLRVGQLSDAYH 626
             P Y +L+D + KAG +  A E ++ M    +    +    +SL+ +     ++  A+ 
Sbjct: 878 IIPAYRILIDSFCKAGRLELALELHKEMSSCTSYSAADKDLYSSLIESLSLASKVDKAFE 937

Query: 627 LLQGMLNLGLKPSLQTYTLLL 647
           L   M+  G  P L  +  L+
Sbjct: 938 LYADMIKRGGIPELSIFFYLV 958



 Score =  118 bits (295), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 92/354 (25%), Positives = 143/354 (40%), Gaps = 84/354 (23%)

Query: 362 TYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLI------------------- 402
           TYT ++    +AR+  + N+L + M+ +GC PNVVTY  LI                   
Sbjct: 552 TYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQIYARM 611

Query: 403 -------------------------HSYG-------RANYLNEALDVFKQMQVVGCEPDR 430
                                     +YG       +A+ + EA D+   M V GCEP+ 
Sbjct: 612 RGNADIPDVDMYFKIDDGNIRDPNIFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNH 671

Query: 431 VTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCE 490
           + Y  LID   K G LD A  ++ KM   G  P+ +TYS +I+ L K   L  A ++   
Sbjct: 672 IVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSR 731

Query: 491 MVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGY 550
           M+   C PN++ Y  MI    K      A +L   M+  G  P+ VTY+ +++  G  G 
Sbjct: 732 MLENSCAPNVIIYTEMIDGLCKVGKTDEAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGK 791

Query: 551 LDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQ-------AGLR- 602
           +D+   +  +M  K   P+   Y +L++    AG +  A +  + M Q       AG R 
Sbjct: 792 VDKCLELMRQMGAKGCAPNFVTYRVLINHCCAAGLLDDAHQLLDEMKQTYWPKHMAGYRK 851

Query: 603 -------------------------PNVPTCNSLLSAFLRVGQLSDAYHLLQGM 631
                                    P +P    L+ +F + G+L  A  L + M
Sbjct: 852 VIEGFNREFIISLGLLDEIAENVAVPIIPAYRILIDSFCKAGRLELALELHKEM 905



 Score =  114 bits (284), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 75/277 (27%), Positives = 133/277 (48%), Gaps = 4/277 (1%)

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
           + G+  + +TY++++  L + ++     K+L +M+ + C PNV+ Y  +I    +    +
Sbjct: 699 ERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVGKTD 758

Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
           EA  +   M+  GC P+ VTY  +ID   KAG +D  +++ ++M A G +P+  TY V+I
Sbjct: 759 EAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGAKGCAPNFVTYRVLI 818

Query: 473 NCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFE 532
           N    AG L  AHQL  EM       ++  Y  +I  +   R +  +L L  ++      
Sbjct: 819 NHCCAAGLLDDAHQLLDEMKQTYWPKHMAGYRKVI--EGFNREFIISLGLLDEIAENVAV 876

Query: 533 PDKVTYSIVMEVLGHCGYLDEAEAVFAEMR--RKNWVPDEPVYGLLVDLWGKAGNVRKAW 590
           P    Y I+++     G L+ A  +  EM         D+ +Y  L++    A  V KA+
Sbjct: 877 PIIPAYRILIDSFCKAGRLELALELHKEMSSCTSYSAADKDLYSSLIESLSLASKVDKAF 936

Query: 591 EWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHL 627
           E Y  M++ G  P +     L+   +R+ +  +A  L
Sbjct: 937 ELYADMIKRGGIPELSIFFYLVKGLIRINRWEEALQL 973


>gi|356557981|ref|XP_003547288.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16390,
           chloroplastic-like [Glycine max]
          Length = 706

 Score =  159 bits (402), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 120/600 (20%), Positives = 251/600 (41%), Gaps = 56/600 (9%)

Query: 282 AGLAPFSRHFASTGNVVESVSRILRQWKWGPLAEEALGNTNYSMDAYQANQVLKQLQDHT 341
           + L   ++   S     E VS IL+           LG++    DA     +L  + +  
Sbjct: 116 SSLTKLAKSLDSCNPTQEHVSEILK----------VLGDSVLEPDAVF---ILNSMVNPY 162

Query: 342 VALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRL 401
            AL    + +++         Y   + +  + + F    KL D+M+  G  PN++T++ +
Sbjct: 163 TALLAVEYFKQKVKSVRHVILYNVTLKLFRKVKDFEGAEKLFDEMLHRGVNPNLITFSTM 222

Query: 402 IHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKK------ 455
           I      +  ++A+  F+ M   GCEPD     ++I  + + G  D+A+ +Y +      
Sbjct: 223 ISCASVCSLPHKAVKWFEMMPSFGCEPDNNVCSSMIYAYTRTGNTDMALRLYDRAKAGKW 282

Query: 456 -----------------------------MQAAGLSPDTFTYSVIINCLGKAGHLQAAHQ 486
                                        M+  G  P+  TY+ ++  +G+A   + A  
Sbjct: 283 HVDTAVFSGLIKMYGVSGNYVGCLNVYNDMKVLGAKPNLTTYNALLYAMGRAKRARDAKA 342

Query: 487 LFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLG 546
           ++ EM++ G  PN  TY  ++    +AR  + AL +Y++M+  G + D + Y+++ ++  
Sbjct: 343 IYGEMISNGLSPNWPTYAALLQAYCRARFNRDALNVYKEMKEKGKDLDILLYNMLFDMCA 402

Query: 547 HCGYLDEAEAVFAEMRRKNWVP-DEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNV 605
           + G +DEA  +F  M+     P D   Y  L++++   G + +    +  M+++G  PN+
Sbjct: 403 NVGCVDEAVKIFEHMKSSGTCPPDSFTYASLINMYSSIGKILEMEAMFNEMMESGFEPNI 462

Query: 606 PTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGFCHEL 665
               SL+  + +  +  D   +   +++LG+ P  +    LL   T+     ++G     
Sbjct: 463 IVLTSLVHCYGKAKRTDDVVKIFNQLMDLGISPDGRFCDCLLYAMTQVPKE-ELGKLSGC 521

Query: 666 MAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRESKRGLVDAVVDFLHKSGL 725
           +  +       L  +      G + R       E+ +S + + K+ + + ++D      +
Sbjct: 522 VEKANPKLGSVLRYIMEKQEGGGDFRTEAS---ELFNSTEADVKKSMCNCLIDLCVSLDV 578

Query: 726 KEEAGSVWEVAAQKNVYPDAVKEKGMSYWLINLHVMSDGTAVIALSRTLAWFRKQMLISG 785
            + A  + ++     +YPD ++ +  + W ++L  +S G A+ ALS  ++   K + +  
Sbjct: 579 PDRARDLLDLGLTLEIYPD-IQSRSQAKWSLHLKRLSVGAALTALSVWISDLSKALELGE 637

Query: 786 VGPSRIDIVTGWGRRSRVTGTSLVRQAVQELLHMFSFPFFTENGNSGCFVGCGEPLNKWL 845
             P  + I TG G+        ++    +  L     PF  +   +G F+   E    WL
Sbjct: 638 ELPPLLGINTGGGKHR--FSDKVLPTVFESYLKELKAPFHKDANKAGWFLATSEAATSWL 695


>gi|168045490|ref|XP_001775210.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162673423|gb|EDQ59946.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 404

 Score =  159 bits (402), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 111/372 (29%), Positives = 172/372 (46%), Gaps = 51/372 (13%)

Query: 333 VLKQLQ---DHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRD 389
           VL +LQ   D    L  F+W ++Q+ +  +   YT ++G LGR  +      L  +M+ +
Sbjct: 16  VLTELQRQHDWRCTLEVFSWSKKQSWYCPNSRLYTRLIGFLGREGRVHNATLLFQEMLLE 75

Query: 390 GCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVG---CEPDRVTYCTLIDIHAKAGFL 446
            CQ +  TY  L+++YG+A    EAL VF  M+      C+P+ VT   LID   K G  
Sbjct: 76  KCQADQYTYTALVNAYGKAKMFEEALAVFSHMKESNEPNCQPNTVTCNALIDALVKGGLY 135

Query: 447 DVAMDMYKKMQAA------GLSPDTFTYSVIINCLGKAGHLQAAHQLFCEM----VNQGC 496
           D A+ ++  M+        G  P+  TY+V+I+ L K G L    ++   M     +Q  
Sbjct: 136 DQAIQVFFDMRDGTNGLEHGCEPNVITYNVLIDALCKEGLLDIGMKVLQYMRDGNTDQSV 195

Query: 497 IPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEA 556
            PN  TYN +I    K   Y+ A +L   M   G +PD +TY+ +++  G  G  + AE 
Sbjct: 196 QPNSATYNTLINACGKGGLYEKAEELVDLMVEHGVQPDHITYTALIDAYGKAGLWENAEN 255

Query: 557 VFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFL 616
            F  M+  N   D   Y  ++D +G+ G  +KA E ++ M  +GLRPN  T  SL+ A+ 
Sbjct: 256 TFKGMKGTNVSVDVMAYTAMIDAYGREGLYQKAEEMFKMMQHSGLRPNQVTYLSLMEAYG 315

Query: 617 RVG-------------------------QLSDAY----------HLLQGMLNLGLKPSLQ 641
           + G                          L DAY           +L  M   G +P+L 
Sbjct: 316 KAGLPEESRNVFNIMRESGYEGNVLIYSSLIDAYGKAGNYLEAARMLDMMRRAGCQPNLI 375

Query: 642 TYTLLLSCCTEA 653
           TY+ +LS C ++
Sbjct: 376 TYSAILSSCCKS 387



 Score =  117 bits (292), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 79/300 (26%), Positives = 143/300 (47%), Gaps = 13/300 (4%)

Query: 393 PNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDM 452
           PN   Y RLI   GR   ++ A  +F++M +  C+ D+ TY  L++ + KA   + A+ +
Sbjct: 44  PNSRLYTRLIGFLGREGRVHNATLLFQEMLLEKCQADQYTYTALVNAYGKAKMFEEALAV 103

Query: 453 YKKMQAAG---LSPDTFTYSVIINCLGKAGHLQAAHQLFCEM------VNQGCIPNLVTY 503
           +  M+ +      P+T T + +I+ L K G    A Q+F +M      +  GC PN++TY
Sbjct: 104 FSHMKESNEPNCQPNTVTCNALIDALVKGGLYDQAIQVFFDMRDGTNGLEHGCEPNVITY 163

Query: 504 NIMIALQAKARNYQSALKLYRDMQNAG----FEPDKVTYSIVMEVLGHCGYLDEAEAVFA 559
           N++I    K       +K+ + M++       +P+  TY+ ++   G  G  ++AE +  
Sbjct: 164 NVLIDALCKEGLLDIGMKVLQYMRDGNTDQSVQPNSATYNTLINACGKGGLYEKAEELVD 223

Query: 560 EMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVG 619
            M      PD   Y  L+D +GKAG    A   ++ M    +  +V    +++ A+ R G
Sbjct: 224 LMVEHGVQPDHITYTALIDAYGKAGLWENAENTFKGMKGTNVSVDVMAYTAMIDAYGREG 283

Query: 620 QLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGFCHELMAVSGHPAHMFLLS 679
               A  + + M + GL+P+  TY  L+    +A  P +      +M  SG+  ++ + S
Sbjct: 284 LYQKAEEMFKMMQHSGLRPNQVTYLSLMEAYGKAGLPEESRNVFNIMRESGYEGNVLIYS 343



 Score = 92.0 bits (227), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 53/181 (29%), Positives = 93/181 (51%)

Query: 350 LRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRAN 409
           L  + G + D  TYT ++   G+A  +         M       +V+ Y  +I +YGR  
Sbjct: 224 LMVEHGVQPDHITYTALIDAYGKAGLWENAENTFKGMKGTNVSVDVMAYTAMIDAYGREG 283

Query: 410 YLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYS 469
              +A ++FK MQ  G  P++VTY +L++ + KAG  + + +++  M+ +G   +   YS
Sbjct: 284 LYQKAEEMFKMMQHSGLRPNQVTYLSLMEAYGKAGLPEESRNVFNIMRESGYEGNVLIYS 343

Query: 470 VIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNA 529
            +I+  GKAG+   A ++   M   GC PNL+TY+ +++   K+  +  A  L R +Q  
Sbjct: 344 SLIDAYGKAGNYLEAARMLDMMRRAGCQPNLITYSAILSSCCKSNCWVEAQVLLRRLQVF 403

Query: 530 G 530
           G
Sbjct: 404 G 404



 Score = 50.8 bits (120), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 50/232 (21%), Positives = 107/232 (46%), Gaps = 18/232 (7%)

Query: 230 NSDRRRIVQPRSKAHSNRLNSNFKSNLQPSDAKVVECVSERFSKPSREMKIPAGLAPFSR 289
           N+D+   VQP S  ++  +N+  K  L     ++V+ + E   +P   +   A +  + +
Sbjct: 190 NTDQS--VQPNSATYNTLINACGKGGLYEKAEELVDLMVEHGVQPDH-ITYTALIDAYGK 246

Query: 290 HFASTGNVVESVSRILRQWKWGPLAEEALGNTNYSMDAYQANQVLKQLQDHTVALGFFNW 349
                  + E+     +  K   ++ + +  T   +DAY    + ++ ++       F  
Sbjct: 247 -----AGLWENAENTFKGMKGTNVSVDVMAYTA-MIDAYGREGLYQKAEE------MFK- 293

Query: 350 LRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRA- 408
           + + +G + ++ TY +++   G+A        + + M   G + NV+ Y+ LI +YG+A 
Sbjct: 294 MMQHSGLRPNQVTYLSLMEAYGKAGLPEESRNVFNIMRESGYEGNVLIYSSLIDAYGKAG 353

Query: 409 NYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAG 460
           NYL EA  +   M+  GC+P+ +TY  ++    K+     A  + +++Q  G
Sbjct: 354 NYL-EAARMLDMMRRAGCQPNLITYSAILSSCCKSNCWVEAQVLLRRLQVFG 404


>gi|297745184|emb|CBI39176.3| unnamed protein product [Vitis vinifera]
          Length = 996

 Score =  159 bits (402), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 100/333 (30%), Positives = 157/333 (47%), Gaps = 16/333 (4%)

Query: 359 DEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVF 418
           D  TYT ++    +        K  D+MVRDGC PNVVTY  LIH+Y +A  ++ A ++F
Sbjct: 514 DVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELF 573

Query: 419 KQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDT------------- 465
           + M   GC P+ VTY  LID H K+G ++ A  +Y +M+     PD              
Sbjct: 574 EMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQIYARMRGNADIPDVDMYFKIDDGNIRD 633

Query: 466 ---FTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKL 522
              FTY  +++ L KA  ++ A  L   M  +GC PN + Y+ +I    K      A  +
Sbjct: 634 PNIFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMV 693

Query: 523 YRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGK 582
           +  M   G+ P+  TYS +++ L     LD A  V + M   +  P+  +Y  ++D   K
Sbjct: 694 FTKMSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCK 753

Query: 583 AGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQT 642
            G   +A+     M + G  PNV T  +++  F + G++     L++ M   G  P+  T
Sbjct: 754 VGKTDEAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGAKGCAPNFVT 813

Query: 643 YTLLLSCCTEARSPYDMGFCHELMAVSGHPAHM 675
           Y +L++ C  A    D     + M  +  P HM
Sbjct: 814 YRVLINHCCAAGLLDDAHQLLDEMKQTYWPKHM 846



 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 126/474 (26%), Positives = 205/474 (43%), Gaps = 61/474 (12%)

Query: 313 LAEEALGNTNYSMDAYQANQVLKQLQDHTVALGFFNWLRRQAG-------------FKHD 359
           L    + ++ ++MD Y               LG F  L  +AG             FK D
Sbjct: 253 LVHREMSDSGFNMDGY--------------TLGCFVHLLCKAGRWREALALIEKEEFKLD 298

Query: 360 EHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFK 419
              YT M+  L  A  F      L +M    C PNVVTY  L+    R   L     +  
Sbjct: 299 TVIYTQMISGLCEASLFEEAMDFLSRMRSSSCIPNVVTYRILLCGCLRKRQLGRCKRILS 358

Query: 420 QMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAG 479
            M   GC P R  + +LI  + ++G    A  + KKM   G  P    Y+++I   G  G
Sbjct: 359 MMITEGCYPSRRIFNSLIHAYCRSGDYSYAYKLLKKMGDCGCQPGYVVYNILIG--GICG 416

Query: 480 H--------LQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF 531
           +        L+ A + + EM++   + N V  + +      A  ++ A  + R+M + GF
Sbjct: 417 NEKLPSLDVLELAEKAYGEMLDAHVVLNKVNVSNLARCLCGAGKFEKAYSIIREMMSKGF 476

Query: 532 EPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWE 591
            PD  TYS V+ +L +   +D A  +F EM+  + VPD   Y +L+D + K G +++A +
Sbjct: 477 IPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARK 536

Query: 592 WYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCT 651
           W++ M++ G  PNV T  +L+ A+L+  ++S A  L + ML+ G  P++ TYT L+    
Sbjct: 537 WFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALID--G 594

Query: 652 EARSPYDMGFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRD------------------- 692
             +S      C     + G+ A +  + M     DG N+RD                   
Sbjct: 595 HCKSGQIEKACQIYARMRGN-ADIPDVDMYFKIDDG-NIRDPNIFTYGALVDGLCKAHKV 652

Query: 693 -HVGSFLEMMHSEDRESKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDA 745
                 L++M  E  E    + DA++D   K G  +EA  V+   +++   P+ 
Sbjct: 653 KEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPNV 706



 Score =  140 bits (353), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 100/344 (29%), Positives = 159/344 (46%), Gaps = 61/344 (17%)

Query: 363 YTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLI-------------------H 403
           + +++    R+  +    KLL +M   GCQP  V YN LI                    
Sbjct: 372 FNSLIHAYCRSGDYSYAYKLLKKMGDCGCQPGYVVYNILIGGICGNEKLPSLDVLELAEK 431

Query: 404 SYGR----------------------ANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHA 441
           +YG                       A    +A  + ++M   G  PD  TY  +I +  
Sbjct: 432 AYGEMLDAHVVLNKVNVSNLARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLC 491

Query: 442 KAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLV 501
            A  +D A  ++++M++  + PD FTY+++I+   K G LQ A + F EMV  GC PN+V
Sbjct: 492 NASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVV 551

Query: 502 TYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHC--GYLDEAEAVFA 559
           TY  +I    KAR   SA +L+  M + G  P+ VTY+ +++  GHC  G +++A  ++A
Sbjct: 552 TYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALID--GHCKSGQIEKACQIYA 609

Query: 560 EMRRKNWVPD-------------EP---VYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRP 603
            MR    +PD             +P    YG LVD   KA  V++A +  + M   G  P
Sbjct: 610 RMRGNADIPDVDMYFKIDDGNIRDPNIFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEP 669

Query: 604 NVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
           N    ++L+  F +VG+L +A  +   M   G  P++ TY+ L+
Sbjct: 670 NHIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYSSLI 713



 Score =  140 bits (352), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 88/309 (28%), Positives = 148/309 (47%), Gaps = 16/309 (5%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           GF  D  TY+ ++G+L  A +      L ++M  +   P+V TY  LI S+ +   L +A
Sbjct: 475 GFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQA 534

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
              F +M   GC P+ VTY  LI  + KA  +  A ++++ M + G  P+  TY+ +I+ 
Sbjct: 535 RKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDG 594

Query: 475 LGKAGHLQAAHQLFCEM--------------VNQGCI--PNLVTYNIMIALQAKARNYQS 518
             K+G ++ A Q++  M              ++ G I  PN+ TY  ++    KA   + 
Sbjct: 595 HCKSGQIEKACQIYARMRGNADIPDVDMYFKIDDGNIRDPNIFTYGALVDGLCKAHKVKE 654

Query: 519 ALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVD 578
           A  L   M   G EP+ + Y  +++     G LDEA+ VF +M  + + P+   Y  L+D
Sbjct: 655 ARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYSSLID 714

Query: 579 LWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKP 638
              K   +  A +    ML+    PNV     ++    +VG+  +AY L+  M   G  P
Sbjct: 715 RLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVGKTDEAYRLMSMMEEKGCHP 774

Query: 639 SLQTYTLLL 647
           ++ TYT ++
Sbjct: 775 NVVTYTAMI 783



 Score =  128 bits (322), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 91/321 (28%), Positives = 143/321 (44%), Gaps = 35/321 (10%)

Query: 362 TYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQM 421
           TY  +V  L +A +      LLD M  +GC+PN + Y+ LI  + +   L+EA  VF +M
Sbjct: 638 TYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKM 697

Query: 422 QVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHL 481
              G  P+  TY +LID   K   LD+A+ +  +M     +P+   Y+ +I+ L K G  
Sbjct: 698 SERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVGKT 757

Query: 482 QAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIV 541
             A++L   M  +GC PN+VTY  MI    KA      L+L R M   G  P+ VTY ++
Sbjct: 758 DEAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGAKGCAPNFVTYRVL 817

Query: 542 MEVLGHCGYLDEAEAVFAEMRRKNW---------------------------------VP 568
           +      G LD+A  +  EM++  W                                 VP
Sbjct: 818 INHCCAAGLLDDAHQLLDEMKQTYWPKHMAGYRKVIEGFNREFIISLGLLDEIAENVAVP 877

Query: 569 DEPVYGLLVDLWGKAGNVRKAWEWYEAM--LQAGLRPNVPTCNSLLSAFLRVGQLSDAYH 626
             P Y +L+D + KAG +  A E ++ M    +    +    +SL+ +     ++  A+ 
Sbjct: 878 IIPAYRILIDSFCKAGRLELALELHKEMSSCTSYSAADKDLYSSLIESLSLASKVDKAFE 937

Query: 627 LLQGMLNLGLKPSLQTYTLLL 647
           L   M+  G  P L  +  L+
Sbjct: 938 LYADMIKRGGIPELSIFFYLV 958



 Score =  119 bits (297), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 92/354 (25%), Positives = 143/354 (40%), Gaps = 84/354 (23%)

Query: 362 TYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLI------------------- 402
           TYT ++    +AR+  + N+L + M+ +GC PNVVTY  LI                   
Sbjct: 552 TYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQIYARM 611

Query: 403 -------------------------HSYG-------RANYLNEALDVFKQMQVVGCEPDR 430
                                     +YG       +A+ + EA D+   M V GCEP+ 
Sbjct: 612 RGNADIPDVDMYFKIDDGNIRDPNIFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNH 671

Query: 431 VTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCE 490
           + Y  LID   K G LD A  ++ KM   G  P+ +TYS +I+ L K   L  A ++   
Sbjct: 672 IVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSR 731

Query: 491 MVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGY 550
           M+   C PN++ Y  MI    K      A +L   M+  G  P+ VTY+ +++  G  G 
Sbjct: 732 MLENSCAPNVIIYTEMIDGLCKVGKTDEAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGK 791

Query: 551 LDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQ-------AGLR- 602
           +D+   +  +M  K   P+   Y +L++    AG +  A +  + M Q       AG R 
Sbjct: 792 VDKCLELMRQMGAKGCAPNFVTYRVLINHCCAAGLLDDAHQLLDEMKQTYWPKHMAGYRK 851

Query: 603 -------------------------PNVPTCNSLLSAFLRVGQLSDAYHLLQGM 631
                                    P +P    L+ +F + G+L  A  L + M
Sbjct: 852 VIEGFNREFIISLGLLDEIAENVAVPIIPAYRILIDSFCKAGRLELALELHKEM 905



 Score =  114 bits (284), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 75/277 (27%), Positives = 133/277 (48%), Gaps = 4/277 (1%)

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
           + G+  + +TY++++  L + ++     K+L +M+ + C PNV+ Y  +I    +    +
Sbjct: 699 ERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVGKTD 758

Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
           EA  +   M+  GC P+ VTY  +ID   KAG +D  +++ ++M A G +P+  TY V+I
Sbjct: 759 EAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGAKGCAPNFVTYRVLI 818

Query: 473 NCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFE 532
           N    AG L  AHQL  EM       ++  Y  +I  +   R +  +L L  ++      
Sbjct: 819 NHCCAAGLLDDAHQLLDEMKQTYWPKHMAGYRKVI--EGFNREFIISLGLLDEIAENVAV 876

Query: 533 PDKVTYSIVMEVLGHCGYLDEAEAVFAEMRR--KNWVPDEPVYGLLVDLWGKAGNVRKAW 590
           P    Y I+++     G L+ A  +  EM         D+ +Y  L++    A  V KA+
Sbjct: 877 PIIPAYRILIDSFCKAGRLELALELHKEMSSCTSYSAADKDLYSSLIESLSLASKVDKAF 936

Query: 591 EWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHL 627
           E Y  M++ G  P +     L+   +R+ +  +A  L
Sbjct: 937 ELYADMIKRGGIPELSIFFYLVKGLIRINRWEEALQL 973


>gi|356538593|ref|XP_003537787.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09820-like [Glycine max]
          Length = 583

 Score =  159 bits (402), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 114/448 (25%), Positives = 216/448 (48%), Gaps = 30/448 (6%)

Query: 324 SMDAYQANQVLKQLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLL 383
           +++ + A +V +++QD+              GFK   ++   ++  L +  + G +  + 
Sbjct: 143 NLEIHSACEVFRRVQDY--------------GFKLSLNSCNPLLSALVKGNETGEMQYVY 188

Query: 384 DQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAK- 442
            +M++   QPN+ T+N  I+   +A  LN+A DV + ++  G  P+ VTY TLID H K 
Sbjct: 189 KEMIKRRIQPNLTTFNIFINGLCKAGKLNKAEDVIEDIKAWGFSPNIVTYNTLIDGHCKK 248

Query: 443 --AGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNL 500
             AG +  A  + K+M A  + P+  T++ +I+   K  ++ AA   F EM  QG  PN+
Sbjct: 249 GSAGKMYRADAILKEMLANKICPNEITFNTLIDGFCKDENVLAAKNAFEEMQRQGLKPNI 308

Query: 501 VTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAE 560
           VTYN +I   +       A+ L+  M   G +P+ VT++ ++        + EA  +F +
Sbjct: 309 VTYNSLINGLSNNGKLDEAIALWDKMVGLGLKPNIVTFNALINGFCKKKMIKEARKLFDD 368

Query: 561 MRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQ 620
           +  ++ VP+   +  ++D + KAG + + +  + +ML  G+ PNV T N L++   R   
Sbjct: 369 IAEQDLVPNAITFNTMIDAFCKAGMMEEGFALHNSMLDEGIFPNVSTYNCLIAGLCRNQN 428

Query: 621 LSDAYHLLQGMLNLGLKPSLQTYTLLLSC-CTEARSPYDMGFCHELMAVSGHPAHMFLLS 679
           +  A  LL  M N  LK  + TY +L+   C +           E++ V   P H+   +
Sbjct: 429 VRAAKKLLNEMENYELKADVVTYNILIGGWCKDGEPSKAEKLLGEMLNVGVKPNHVTYNT 488

Query: 680 MPSPGPDGQNVRDHVGSFLEMMHSEDRESKRGLV---DAVVDFLHKSGLKEEAGSVWEVA 736
           +     DG  +  ++ + L++    ++E KR  V   + ++    K+G  E+A  +    
Sbjct: 489 L----MDGYCMEGNLKAALKVRTQMEKEGKRANVVTYNVLIKGFCKTGKLEDANRLLNEM 544

Query: 737 AQKNVYPDAVKEKGMSYWLINLHVMSDG 764
            +K + P+       +Y ++ L ++  G
Sbjct: 545 LEKGLNPNRT-----TYDVVRLEMLEKG 567



 Score = 82.0 bits (201), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 55/195 (28%), Positives = 93/195 (47%)

Query: 362 TYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQM 421
           T+ TM+    +A        L + M+ +G  PNV TYN LI    R   +  A  +  +M
Sbjct: 380 TFNTMIDAFCKAGMMEEGFALHNSMLDEGIFPNVSTYNCLIAGLCRNQNVRAAKKLLNEM 439

Query: 422 QVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHL 481
           +    + D VTY  LI    K G    A  +  +M   G+ P+  TY+ +++     G+L
Sbjct: 440 ENYELKADVVTYNILIGGWCKDGEPSKAEKLLGEMLNVGVKPNHVTYNTLMDGYCMEGNL 499

Query: 482 QAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIV 541
           +AA ++  +M  +G   N+VTYN++I    K    + A +L  +M   G  P++ TY +V
Sbjct: 500 KAALKVRTQMEKEGKRANVVTYNVLIKGFCKTGKLEDANRLLNEMLEKGLNPNRTTYDVV 559

Query: 542 MEVLGHCGYLDEAEA 556
              +   G++ + E 
Sbjct: 560 RLEMLEKGFIPDIEG 574



 Score = 51.2 bits (121), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 53/275 (19%), Positives = 115/275 (41%), Gaps = 4/275 (1%)

Query: 496 CIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAE 555
           C   L+T  +++A         SA +++R +Q+ GF+    + + ++  L       E +
Sbjct: 127 CANALITDMLVLAYVTNLE-IHSACEVFRRVQDYGFKLSLNSCNPLLSALVKGNETGEMQ 185

Query: 556 AVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAF 615
            V+ EM ++   P+   + + ++   KAG + KA +  E +   G  PN+ T N+L+   
Sbjct: 186 YVYKEMIKRRIQPNLTTFNIFINGLCKAGKLNKAEDVIEDIKAWGFSPNIVTYNTLIDGH 245

Query: 616 LRVGQLSDAYH---LLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGFCHELMAVSGHP 672
            + G     Y    +L+ ML   + P+  T+  L+    +  +        E M   G  
Sbjct: 246 CKKGSAGKMYRADAILKEMLANKICPNEITFNTLIDGFCKDENVLAAKNAFEEMQRQGLK 305

Query: 673 AHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRESKRGLVDAVVDFLHKSGLKEEAGSV 732
            ++   +    G       D   +  + M     +      +A+++   K  + +EA  +
Sbjct: 306 PNIVTYNSLINGLSNNGKLDEAIALWDKMVGLGLKPNIVTFNALINGFCKKKMIKEARKL 365

Query: 733 WEVAAQKNVYPDAVKEKGMSYWLINLHVMSDGTAV 767
           ++  A++++ P+A+    M        +M +G A+
Sbjct: 366 FDDIAEQDLVPNAITFNTMIDAFCKAGMMEEGFAL 400


>gi|297741319|emb|CBI32450.3| unnamed protein product [Vitis vinifera]
          Length = 851

 Score =  159 bits (402), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 87/279 (31%), Positives = 146/279 (52%), Gaps = 11/279 (3%)

Query: 386 MVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGF 445
           M+R    PNV TYN LI  +     L + L  F +M+  GC P+ VTY TLID + K G 
Sbjct: 1   MIRSRVSPNVYTYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGR 60

Query: 446 LDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNI 505
           +D A  + K M + G+ P+  +Y+VIIN L + G ++ A ++  EM  +G  P+ VTYN 
Sbjct: 61  IDEAFGLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNT 120

Query: 506 MIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKN 565
           ++    K  N+  AL ++ +M   G  P  VTY+ ++  +     L+ A   F +MR + 
Sbjct: 121 LLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRG 180

Query: 566 WVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAY 625
             P+E  Y  L+D + + G + +A+     M ++G  P+V T N+ +     + ++ +A 
Sbjct: 181 LRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEAL 240

Query: 626 HLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGFCHE 664
            ++Q M+  GL P + +Y+ ++S           GFC +
Sbjct: 241 GVVQEMVEKGLAPDVVSYSTIIS-----------GFCRK 268



 Score =  157 bits (397), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 87/300 (29%), Positives = 153/300 (51%), Gaps = 12/300 (4%)

Query: 361 HTYTTMVGILGRARQFGAINKL------LDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           +TY  ++      R F ++ +L        +M R+GC PNVVTYN LI +Y +   ++EA
Sbjct: 11  YTYNILI------RGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGRIDEA 64

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
             + K M   G +P+ ++Y  +I+   + G +  A ++ ++M   G +PD  TY+ ++N 
Sbjct: 65  FGLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNTLLNG 124

Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPD 534
             K G+   A  +  EMV  G  P++VTY  +I    KARN   A++ +  M+  G  P+
Sbjct: 125 YCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRGLRPN 184

Query: 535 KVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYE 594
           + TY+ +++     G L+EA  +  EM    + P    Y   +        + +A    +
Sbjct: 185 ERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEALGVVQ 244

Query: 595 AMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEAR 654
            M++ GL P+V + ++++S F R G+L  A+ + Q M+  G+ P   TY+ L+    E R
Sbjct: 245 EMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQGLCEMR 304



 Score =  155 bits (392), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 96/314 (30%), Positives = 161/314 (51%), Gaps = 6/314 (1%)

Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLI 402
            LG F  + R  G   +  TY T++    +  +      LL  M   G QPN+++YN +I
Sbjct: 29  GLGCFGEMERN-GCLPNVVTYNTLIDAYCKMGRIDEAFGLLKSMSSKGMQPNLISYNVII 87

Query: 403 HSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLS 462
           +   R   + EA ++ ++M   G  PD VTY TL++ + K G    A+ ++ +M   G+S
Sbjct: 88  NGLCREGSMKEAWEILEEMGYKGFTPDEVTYNTLLNGYCKEGNFHQALVIHAEMVRNGVS 147

Query: 463 PDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKL 522
           P   TY+ +IN + KA +L  A + F +M  +G  PN  TY  +I   ++      A ++
Sbjct: 148 PSVVTYTALINSMCKARNLNRAMEFFDQMRIRGLRPNERTYTTLIDGFSRQGLLNEAYRI 207

Query: 523 YRDMQNAGFEPDKVTYSIVMEVLGHC--GYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLW 580
             +M  +GF P  VTY+  +   GHC    ++EA  V  EM  K   PD   Y  ++  +
Sbjct: 208 LNEMTESGFSPSVVTYNAFIH--GHCVLERMEEALGVVQEMVEKGLAPDVVSYSTIISGF 265

Query: 581 GKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSL 640
            + G + +A++  + M++ G+ P+  T +SL+     + +L++A  L Q ML++GL P  
Sbjct: 266 CRKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQGLCEMRRLTEACDLSQEMLDMGLPPDE 325

Query: 641 QTYTLLLSC-CTEA 653
            TYT L++  C E 
Sbjct: 326 FTYTTLINAYCVEG 339



 Score =  150 bits (379), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 115/397 (28%), Positives = 186/397 (46%), Gaps = 23/397 (5%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           GF  DE TY T++    +   F     +  +MVR+G  P+VVTY  LI+S  +A  LN A
Sbjct: 110 GFTPDEVTYNTLLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRA 169

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
           ++ F QM++ G  P+  TY TLID  ++ G L+ A  +  +M  +G SP   TY+  I+ 
Sbjct: 170 MEFFDQMRIRGLRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHG 229

Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPD 534
                 ++ A  +  EMV +G  P++V+Y+ +I+   +      A ++ ++M   G  PD
Sbjct: 230 HCVLERMEEALGVVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPD 289

Query: 535 KVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYE 594
            VTYS +++ L     L EA  +  EM      PDE  Y  L++ +   G++ KA   ++
Sbjct: 290 AVTYSSLIQGLCEMRRLTEACDLSQEMLDMGLPPDEFTYTTLINAYCVEGDLNKALHLHD 349

Query: 595 AMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCT--E 652
            M+  G  P+  T + L++   +  +  +A  LL  ++     PS  TY  L+  C+  E
Sbjct: 350 EMIHKGFLPDAVTYSVLINGLNKQARTREAKRLLFKLIYEESVPSDVTYDTLIENCSNIE 409

Query: 653 ARSPYDM--GFCHELMAVSGHPAHMFLLSMPS----PGPDGQNVRDH-----------VG 695
            +S   +  GFC + +    H A     SM      PG    NV  H             
Sbjct: 410 FKSVVALIKGFCMKGLM---HEADRVFESMVERNHKPGEAVYNVIIHGHCRGGNLPKAFN 466

Query: 696 SFLEMMHSEDRESKRGLVDAVVDFLHKSGLKEEAGSV 732
            + EM+HS        ++  ++  L K G+ EE   V
Sbjct: 467 LYKEMIHSGFVPHTVTVI-TLIKALFKEGMNEEMSEV 502



 Score =  147 bits (371), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 97/327 (29%), Positives = 149/327 (45%), Gaps = 51/327 (15%)

Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLI 402
           A+ FF+ +R + G + +E TYTT++    R        ++L++M   G  P+VVTYN  I
Sbjct: 169 AMEFFDQMRIR-GLRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFI 227

Query: 403 HSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLS 462
           H +     + EAL V ++M   G  PD V+Y T+I    + G LD A  M ++M   G+S
Sbjct: 228 HGHCVLERMEEALGVVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVS 287

Query: 463 PDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKL 522
           PD  TYS +I  L +   L  A  L  EM++ G  P+  TY  +I       +   AL L
Sbjct: 288 PDAVTYSSLIQGLCEMRRLTEACDLSQEMLDMGLPPDEFTYTTLINAYCVEGDLNKALHL 347

Query: 523 YRDMQNAGFEPDKVTYSIVMEVL------------------------------------- 545
           + +M + GF PD VTYS+++  L                                     
Sbjct: 348 HDEMIHKGFLPDAVTYSVLINGLNKQARTREAKRLLFKLIYEESVPSDVTYDTLIENCSN 407

Query: 546 -----------GHC--GYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEW 592
                      G C  G + EA+ VF  M  +N  P E VY +++    + GN+ KA+  
Sbjct: 408 IEFKSVVALIKGFCMKGLMHEADRVFESMVERNHKPGEAVYNVIIHGHCRGGNLPKAFNL 467

Query: 593 YEAMLQAGLRPNVPTCNSLLSAFLRVG 619
           Y+ M+ +G  P+  T  +L+ A  + G
Sbjct: 468 YKEMIHSGFVPHTVTVITLIKALFKEG 494



 Score =  143 bits (361), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 87/287 (30%), Positives = 144/287 (50%)

Query: 362 TYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQM 421
           +Y  ++  L R        ++L++M   G  P+ VTYN L++ Y +    ++AL +  +M
Sbjct: 82  SYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNTLLNGYCKEGNFHQALVIHAEM 141

Query: 422 QVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHL 481
              G  P  VTY  LI+   KA  L+ AM+ + +M+  GL P+  TY+ +I+   + G L
Sbjct: 142 VRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRGLRPNERTYTTLIDGFSRQGLL 201

Query: 482 QAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIV 541
             A+++  EM   G  P++VTYN  I         + AL + ++M   G  PD V+YS +
Sbjct: 202 NEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEALGVVQEMVEKGLAPDVVSYSTI 261

Query: 542 MEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGL 601
           +      G LD A  +  EM  K   PD   Y  L+    +   + +A +  + ML  GL
Sbjct: 262 ISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQGLCEMRRLTEACDLSQEMLDMGL 321

Query: 602 RPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
            P+  T  +L++A+   G L+ A HL   M++ G  P   TY++L++
Sbjct: 322 PPDEFTYTTLINAYCVEGDLNKALHLHDEMIHKGFLPDAVTYSVLIN 368


>gi|224064580|ref|XP_002301519.1| predicted protein [Populus trichocarpa]
 gi|222843245|gb|EEE80792.1| predicted protein [Populus trichocarpa]
          Length = 718

 Score =  159 bits (401), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 129/523 (24%), Positives = 234/523 (44%), Gaps = 51/523 (9%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           G   D  TY T++  + +  Q     +++ +M      PNVVTY+ +I  Y +A  L++A
Sbjct: 213 GIDQDIFTYNTLLDAVCKGGQLDMAFEIMSEMPAKNILPNVVTYSTMIDGYAKAGRLDDA 272

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
            ++F +M+ +G   DRV+Y TL+ I+AK G  + AMD+ ++M+ +G+  D  TY+ ++  
Sbjct: 273 RNLFNEMKFLGISLDRVSYNTLLSIYAKLGRFEEAMDVCREMENSGIRKDVVTYNALLGG 332

Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPD 534
            GK        ++F EM  +   PNL+TY+ +I + +K   Y+ A+ ++R+ + AG + D
Sbjct: 333 YGKQYKYDVVRKVFEEMKARHVSPNLLTYSTLIDVYSKGGLYREAMDVFREFKKAGLKAD 392

Query: 535 KVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGN----VRKAW 590
            V YS +++ L   G ++ A ++  EM ++   P+   Y  ++D +G+       V  A 
Sbjct: 393 VVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRPATTESVVDDAG 452

Query: 591 EWYEAMLQAGLRPNVPTCNSLLSA------FLRV-GQLSDA----------------YHL 627
           +  E  + +     V      L A       +++ GQL+                    +
Sbjct: 453 QTSELQIDSLSSSAVEKATKSLVADREDNRIIKIFGQLAAEKAGQAKNSGGQEMMCILGV 512

Query: 628 LQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGFCHELMAVSGHP----AHMFLLSMPSP 683
              M  L +KP++ T++ +L+ C+   S  +     E + +  +     AH  L+     
Sbjct: 513 FHKMHELEIKPNVVTFSAILNACSRCNSFEEASMLLEELRLFDNQVYGVAHGLLMGYR-- 570

Query: 684 GPDGQNVRDHVGSFLEMMHSEDRESKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYP 743
               +NV +   S  + +   D  +     +A+ D L   G K  A  V     ++ V+ 
Sbjct: 571 ----ENVWEQAQSLFDEVKLMDSSTASAFYNALTDMLWHFGQKRGAQLVVLEGKRRQVWE 626

Query: 744 DAVKEKGMSYWLINLHVMSDGTAVIALSRTLAWFRKQMLISGVGPSRIDIVTGWGRRSRV 803
           +   E       ++LH+MS G A   +    AW      I   G     ++      S+V
Sbjct: 627 NVWSES-----CLDLHLMSSGAARAMVH---AWLLNVRAIVFEGHEVPKLL------SKV 672

Query: 804 TGTSLVRQAVQELLHMFSFPFFTENGNSGCFVGCGEPLNKWLL 846
            G S +R+AV+ LL     PF +   N G  +  G  +  W L
Sbjct: 673 VGDSTLRRAVEALLMGMGAPFRSAKCNLGRLISTGSVVASWCL 715



 Score =  155 bits (393), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 96/333 (28%), Positives = 172/333 (51%), Gaps = 4/333 (1%)

Query: 316 EALGNTNYSMDAYQANQVLKQLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRAR- 374
           E  GNT Y+  A  +        +  + + F++   +  G K +  TY  ++   G+   
Sbjct: 106 EGYGNTVYAFSAIISAYGRSGYCNEAIKI-FYSM--KDYGLKPNLVTYNAVIDACGKGGV 162

Query: 375 QFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYC 434
           +F  + ++ D+M+R+G QP+ +T+N L+    +      A  +  +M   G + D  TY 
Sbjct: 163 EFKRVLEIFDEMLRNGMQPDRITFNSLLAVCSKGGLWEAARSLSCEMVNRGIDQDIFTYN 222

Query: 435 TLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQ 494
           TL+D   K G LD+A ++  +M A  + P+  TYS +I+   KAG L  A  LF EM   
Sbjct: 223 TLLDAVCKGGQLDMAFEIMSEMPAKNILPNVVTYSTMIDGYAKAGRLDDARNLFNEMKFL 282

Query: 495 GCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEA 554
           G   + V+YN ++++ AK   ++ A+ + R+M+N+G   D VTY+ ++   G     D  
Sbjct: 283 GISLDRVSYNTLLSIYAKLGRFEEAMDVCREMENSGIRKDVVTYNALLGGYGKQYKYDVV 342

Query: 555 EAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSA 614
             VF EM+ ++  P+   Y  L+D++ K G  R+A + +    +AGL+ +V   ++L+ A
Sbjct: 343 RKVFEEMKARHVSPNLLTYSTLIDVYSKGGLYREAMDVFREFKKAGLKADVVLYSALIDA 402

Query: 615 FLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
             + G +  A  LL  M   G++P++ TY  ++
Sbjct: 403 LCKNGLVESAVSLLDEMTKEGIRPNVVTYNSII 435



 Score =  143 bits (360), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 97/334 (29%), Positives = 160/334 (47%), Gaps = 13/334 (3%)

Query: 295 GNVVESVSRILRQWKWGPLAEEALGNTNYSMDAY-------QANQVLKQLQDHTV----A 343
           GN V + S I+  +       EA+    YSM  Y         N V+       V     
Sbjct: 109 GNTVYAFSAIISAYGRSGYCNEAI-KIFYSMKDYGLKPNLVTYNAVIDACGKGGVEFKRV 167

Query: 344 LGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIH 403
           L  F+ + R  G + D  T+ +++ +  +   + A   L  +MV  G   ++ TYN L+ 
Sbjct: 168 LEIFDEMLRN-GMQPDRITFNSLLAVCSKGGLWEAARSLSCEMVNRGIDQDIFTYNTLLD 226

Query: 404 SYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSP 463
           +  +   L+ A ++  +M      P+ VTY T+ID +AKAG LD A +++ +M+  G+S 
Sbjct: 227 AVCKGGQLDMAFEIMSEMPAKNILPNVVTYSTMIDGYAKAGRLDDARNLFNEMKFLGISL 286

Query: 464 DTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLY 523
           D  +Y+ +++   K G  + A  +  EM N G   ++VTYN ++    K   Y    K++
Sbjct: 287 DRVSYNTLLSIYAKLGRFEEAMDVCREMENSGIRKDVVTYNALLGGYGKQYKYDVVRKVF 346

Query: 524 RDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKA 583
            +M+     P+ +TYS +++V    G   EA  VF E ++     D  +Y  L+D   K 
Sbjct: 347 EEMKARHVSPNLLTYSTLIDVYSKGGLYREAMDVFREFKKAGLKADVVLYSALIDALCKN 406

Query: 584 GNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLR 617
           G V  A    + M + G+RPNV T NS++ AF R
Sbjct: 407 GLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGR 440



 Score =  135 bits (341), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 97/384 (25%), Positives = 169/384 (44%), Gaps = 36/384 (9%)

Query: 364 TTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQV 423
           + M+  LGR  +      +    + +G    V  ++ +I +YGR+ Y NEA+ +F  M+ 
Sbjct: 81  SAMISTLGRLGKVEMAKTVFKAALTEGYGNTVYAFSAIISAYGRSGYCNEAIKIFYSMKD 140

Query: 424 VGCEPDRVTYCTLIDIHAKAGF-LDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQ 482
            G +P+ VTY  +ID   K G      ++++ +M   G+ PD  T++ ++    K G  +
Sbjct: 141 YGLKPNLVTYNAVIDACGKGGVEFKRVLEIFDEMLRNGMQPDRITFNSLLAVCSKGGLWE 200

Query: 483 AAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVM 542
           AA  L CEMVN+G   ++ TYN ++    K      A ++  +M      P+ VTYS ++
Sbjct: 201 AARSLSCEMVNRGIDQDIFTYNTLLDAVCKGGQLDMAFEIMSEMPAKNILPNVVTYSTMI 260

Query: 543 EVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLR 602
           +     G LD+A  +F EM+      D   Y  L+ ++ K G   +A +    M  +G+R
Sbjct: 261 DGYAKAGRLDDARNLFNEMKFLGISLDRVSYNTLLSIYAKLGRFEEAMDVCREMENSGIR 320

Query: 603 PNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGFC 662
            +V T N+LL  + +  +      + + M    + P+L TY+ L+   ++       G  
Sbjct: 321 KDVVTYNALLGGYGKQYKYDVVRKVFEEMKARHVSPNLLTYSTLIDVYSKG------GLY 374

Query: 663 HELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRESKRGLVDAVVDFLHK 722
            E M V               G     V                     L  A++D L K
Sbjct: 375 REAMDV--------FREFKKAGLKADVV---------------------LYSALIDALCK 405

Query: 723 SGLKEEAGSVWEVAAQKNVYPDAV 746
           +GL E A S+ +   ++ + P+ V
Sbjct: 406 NGLVESAVSLLDEMTKEGIRPNVV 429



 Score = 60.1 bits (144), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 55/260 (21%), Positives = 99/260 (38%), Gaps = 53/260 (20%)

Query: 354 AGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNE 413
           +G + D  TY  ++G  G+  ++  + K+ ++M      PN++TY+ LI  Y +     E
Sbjct: 317 SGIRKDVVTYNALLGGYGKQYKYDVVRKVFEEMKARHVSPNLLTYSTLIDVYSKGGLYRE 376

Query: 414 ALDVFKQ-----------------------------------MQVVGCEPDRVTYCTLID 438
           A+DVF++                                   M   G  P+ VTY ++ID
Sbjct: 377 AMDVFREFKKAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIID 436

Query: 439 IHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIP 498
              +    +  +D     Q + L  D+ + S +          +A   L  +  +   I 
Sbjct: 437 AFGRPATTESVVD--DAGQTSELQIDSLSSSAV---------EKATKSLVADREDNRIIK 485

Query: 499 NLVTYNIMIALQAK---ARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAE 555
                    A QAK    +     L ++  M     +P+ VT+S ++     C   +EA 
Sbjct: 486 IFGQLAAEKAGQAKNSGGQEMMCILGVFHKMHELEIKPNVVTFSAILNACSRCNSFEEAS 545

Query: 556 AVFAEMRRKNWVPDEPVYGL 575
            +  E+R    + D  VYG+
Sbjct: 546 MLLEELR----LFDNQVYGV 561



 Score = 52.0 bits (123), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 58/245 (23%), Positives = 100/245 (40%), Gaps = 34/245 (13%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           ++AG K D   Y+ ++  L +     +   LLD+M ++G +PNVVTYN +I ++GR    
Sbjct: 385 KKAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRPATT 444

Query: 412 NEALDVFKQ---MQVVGCEPDRVTYCT-----------LIDIHA-----KAG-------- 444
              +D   Q   +Q+       V   T           +I I       KAG        
Sbjct: 445 ESVVDDAGQTSELQIDSLSSSAVEKATKSLVADREDNRIIKIFGQLAAEKAGQAKNSGGQ 504

Query: 445 FLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYN 504
            +   + ++ KM    + P+  T+S I+N   +    + A  L  E+       N V Y 
Sbjct: 505 EMMCILGVFHKMHELEIKPNVVTFSAILNACSRCNSFEEASMLLEEL---RLFDNQV-YG 560

Query: 505 IMIALQAKARN--YQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAE-M 561
           +   L    R   ++ A  L+ +++          Y+ + ++L H G    A+ V  E  
Sbjct: 561 VAHGLLMGYRENVWEQAQSLFDEVKLMDSSTASAFYNALTDMLWHFGQKRGAQLVVLEGK 620

Query: 562 RRKNW 566
           RR+ W
Sbjct: 621 RRQVW 625



 Score = 45.1 bits (105), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 49/216 (22%), Positives = 89/216 (41%), Gaps = 11/216 (5%)

Query: 538 YSIVMEVLGHCGYLDEAEAVF--AEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEA 595
           Y  ++  LG+ G   +A   F  A  R +       +   ++   G+ G V  A   ++A
Sbjct: 43  YVFLLRELGNRGDCKKAICCFEFAVKRERKKNEQGKLASAMISTLGRLGKVEMAKTVFKA 102

Query: 596 MLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARS 655
            L  G    V   ++++SA+ R G  ++A  +   M + GLKP+L TY  ++  C +   
Sbjct: 103 ALTEGYGNTVYAFSAIISAYGRSGYCNEAIKIFYSMKDYGLKPNLVTYNAVIDACGKGGV 162

Query: 656 PYD--MGFCHELMAVSGHPAHMF---LLSMPSPGPDGQNVRDHVGSFLEMMHSEDRESKR 710
            +   +    E++     P  +    LL++ S G   +  R      +     +D  +  
Sbjct: 163 EFKRVLEIFDEMLRNGMQPDRITFNSLLAVCSKGGLWEAARSLSCEMVNRGIDQDIFTYN 222

Query: 711 GLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAV 746
            L+DAV     K G  + A  +      KN+ P+ V
Sbjct: 223 TLLDAVC----KGGQLDMAFEIMSEMPAKNILPNVV 254


>gi|224107773|ref|XP_002333469.1| predicted protein [Populus trichocarpa]
 gi|222836989|gb|EEE75382.1| predicted protein [Populus trichocarpa]
          Length = 1048

 Score =  159 bits (401), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 93/342 (27%), Positives = 173/342 (50%), Gaps = 2/342 (0%)

Query: 297 VVESVSRILRQWKWGPLAEEALGNTNYSMDAYQANQVLKQ-LQDHTVALGFFNWLRRQAG 355
           VV  ++ I+R        EE L    + ++     +VLK+  +   +A  FFNW++ + G
Sbjct: 140 VVHEITGIVRAENCTASMEERLDKVGFQLEPEIVEKVLKRCYKVPHLAYRFFNWVKTKDG 199

Query: 356 FKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEAL 415
           F H   TY TM+   G AR+F  ++ LL++M +  C+ ++ T+  LI  YG+A  + +AL
Sbjct: 200 FCHTTKTYNTMLYTAGEAREFSVVDVLLEEMEKYSCERDIKTWTILIRQYGKAKLIGKAL 259

Query: 416 DVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCL 475
            V ++M+  GCEPD   Y   +     AG  ++A+++YK+M    + P+   Y +++NCL
Sbjct: 260 LVHEKMRKSGCEPDVEVYEVTLHSLCDAGKGEIALEIYKEMVQREMEPNLSLYKMLLNCL 319

Query: 476 GKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDK 535
            K+G + A   +  +M+    IP    +  ++     A   + AL+L RD++N   + D 
Sbjct: 320 AKSGDVSAVQSVADDMIRVSQIPEHDVHVCVLKSYCVAGRIREALELIRDLKNKEIQLDY 379

Query: 536 VTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEA 595
                +++ L     + +A  +   M+RK++V D  VYG++++ + +   + KA + +++
Sbjct: 380 EVSETLVKGLSRANRIADALEIVEIMKRKDFV-DGKVYGIIINGYLRRNELSKALDLFQS 438

Query: 596 MLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLK 637
           M + G  P   T   L+    R  +      L   ML  G++
Sbjct: 439 MKEFGHLPTTSTYTELMQHLFRSNEYQKCCELYDEMLERGVE 480



 Score =  127 bits (319), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 97/374 (25%), Positives = 166/374 (44%), Gaps = 8/374 (2%)

Query: 284 LAPFSRHFASTGNVVESVSRILRQWKWGPLAEEALGNTNYSMDAYQANQVLKQLQDH-TV 342
           + P S+ +      ++ V RIL   +  P+ ++AL             + L+    H   
Sbjct: 621 VKPLSKAYDEQD--LQEVLRILSSLEDWPIIQDALEKCTIQFTPELVAETLRNCGMHGNA 678

Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLI 402
           AL FF W+ +Q GF     TY   + + GR + F  +  L  +M R G      T+  +I
Sbjct: 679 ALHFFAWVGKQNGFCQTTETYNMAMKVSGRGKDFKHMRSLFYEMRRRGFLIPPDTWAIMI 738

Query: 403 HSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHA--KAGFLDVAMDMYKKMQAAG 460
             YGR      AL +F +M+  GC P+  TY  LI      K   +D A+ ++++M  AG
Sbjct: 739 MQYGRTGLTEIALKIFGEMKASGCNPNDSTYKYLIIFLCGRKGRKVDEAIKIFREMIRAG 798

Query: 461 LSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQG-CIPNLVTYNIMIALQAKARNYQSA 519
             PD       + CL + G L  A +    +   G  +P   +Y++ I    +A   + A
Sbjct: 799 HVPDKELVGTYLCCLCEVGKLLEARKSVDSLCKAGFTVP--ASYSLYIRALCRAGMLEEA 856

Query: 520 LKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDL 579
           L L   +       D+ T++ ++  L   G L+EA A    M++    P   VY  L+  
Sbjct: 857 LSLVDQVSTEKTTLDRYTHASLVHGLLQKGRLEEALAKVDSMKQVGINPTVHVYTSLIVH 916

Query: 580 WGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPS 639
           + +     KA E +E+M Q G  P + T ++L+  ++    + +A+++   +   G  P 
Sbjct: 917 FFREKLASKALEIFESMKQEGCEPTIVTYSALIRGYMDTENVIEAWNVFHSLKTKGPAPD 976

Query: 640 LQTYTLLLSCCTEA 653
            +TY++ LSC   A
Sbjct: 977 FKTYSMFLSCLCRA 990



 Score = 85.9 bits (211), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 51/151 (33%), Positives = 85/151 (56%), Gaps = 12/151 (7%)

Query: 359  DEHTYTTMV-GILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDV 417
            D +T+ ++V G+L + R   A+ K+ D M + G  P V  Y  LI  + R    ++AL++
Sbjct: 871  DRYTHASLVHGLLQKGRLEEALAKV-DSMKQVGINPTVHVYTSLIVHFFREKLASKALEI 929

Query: 418  FKQMQVVGCEPDRVTYCTLIDIHAKAGFLDV-----AMDMYKKMQAAGLSPDTFTYSVII 472
            F+ M+  GCEP  VTY  LI      G++D      A +++  ++  G +PD  TYS+ +
Sbjct: 930  FESMKQEGCEPTIVTYSALI-----RGYMDTENVIEAWNVFHSLKTKGPAPDFKTYSMFL 984

Query: 473  NCLGKAGHLQAAHQLFCEMVNQGCIPNLVTY 503
            +CL +AG  + A QL  +MV+ G +P+ V +
Sbjct: 985  SCLCRAGKSEEALQLLSDMVDNGIVPSNVNF 1015



 Score = 72.8 bits (177), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 57/226 (25%), Positives = 98/226 (43%), Gaps = 2/226 (0%)

Query: 343  ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLI 402
            A+  F  + R AG   D+    T +  L    +     K +D + + G      +Y+  I
Sbjct: 787  AIKIFREMIR-AGHVPDKELVGTYLCCLCEVGKLLEARKSVDSLCKAGFTVPA-SYSLYI 844

Query: 403  HSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLS 462
             +  RA  L EAL +  Q+       DR T+ +L+    + G L+ A+     M+  G++
Sbjct: 845  RALCRAGMLEEALSLVDQVSTEKTTLDRYTHASLVHGLLQKGRLEEALAKVDSMKQVGIN 904

Query: 463  PDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKL 522
            P    Y+ +I    +      A ++F  M  +GC P +VTY+ +I       N   A  +
Sbjct: 905  PTVHVYTSLIVHFFREKLASKALEIFESMKQEGCEPTIVTYSALIRGYMDTENVIEAWNV 964

Query: 523  YRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVP 568
            +  ++  G  PD  TYS+ +  L   G  +EA  + ++M     VP
Sbjct: 965  FHSLKTKGPAPDFKTYSMFLSCLCRAGKSEEALQLLSDMVDNGIVP 1010



 Score = 68.6 bits (166), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 51/205 (24%), Positives = 88/205 (42%), Gaps = 4/205 (1%)

Query: 362  TYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQM 421
            +Y+  +  L RA        L+DQ+  +    +  T+  L+H   +   L EAL     M
Sbjct: 839  SYSLYIRALCRAGMLEEALSLVDQVSTEKTTLDRYTHASLVHGLLQKGRLEEALAKVDSM 898

Query: 422  QVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHL 481
            + VG  P    Y +LI    +      A+++++ M+  G  P   TYS +I       ++
Sbjct: 899  KQVGINPTVHVYTSLIVHFFREKLASKALEIFESMKQEGCEPTIVTYSALIRGYMDTENV 958

Query: 482  QAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIV 541
              A  +F  +  +G  P+  TY++ ++   +A   + AL+L  DM + G  P  V +  V
Sbjct: 959  IEAWNVFHSLKTKGPAPDFKTYSMFLSCLCRAGKSEEALQLLSDMVDNGIVPSNVNFRTV 1018

Query: 542  MEVLGHCGYLDEAEAVFAEMRRKNW 566
               L   G    A+ V     +K W
Sbjct: 1019 FFGLNREGKQSLAQTVL----QKKW 1039



 Score = 62.8 bits (151), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 57/240 (23%), Positives = 114/240 (47%), Gaps = 14/240 (5%)

Query: 357 KHDEHTYTTMVGILGRARQFGAINKLLDQMVRD----GCQPNVVTYNRLIHSYGRANYLN 412
           +HD H     V +L      G I + L +++RD      Q +      L+    RAN + 
Sbjct: 343 EHDVH-----VCVLKSYCVAGRIREAL-ELIRDLKNKEIQLDYEVSETLVKGLSRANRIA 396

Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
           +AL++ + M+       +V Y  +I+ + +   L  A+D+++ M+  G  P T TY+ ++
Sbjct: 397 DALEIVEIMKRKDFVDGKV-YGIIINGYLRRNELSKALDLFQSMKEFGHLPTTSTYTELM 455

Query: 473 NCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFE 532
             L ++   Q   +L+ EM+ +G   + V    ++A   +  +   A +++  M++ G +
Sbjct: 456 QHLFRSNEYQKCCELYDEMLERGVEIDSVAVMAIVAGHVRQDHISEAWEVFETMEDKGIK 515

Query: 533 PDKVTYSIVMEVLGHCGYLDEAEAVFAEMR-RKNWVPDEPVYGLL--VDLWGKAGNVRKA 589
           P   +YSI ++ L      DE   V  +M+  K ++ DE    ++  ++  G+  N+RK 
Sbjct: 516 PTWKSYSIFIKELCKVSRTDEIIKVLGKMQASKMFICDEIFEWVISCMERKGEMDNIRKV 575



 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 40/154 (25%), Positives = 67/154 (43%), Gaps = 1/154 (0%)

Query: 502 TYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEM 561
           TYN M+    +AR +     L  +M+    E D  T++I++   G    + +A  V  +M
Sbjct: 206 TYNTMLYTAGEAREFSVVDVLLEEMEKYSCERDIKTWTILIRQYGKAKLIGKALLVHEKM 265

Query: 562 RRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQL 621
           R+    PD  VY + +     AG    A E Y+ M+Q  + PN+     LL+   + G +
Sbjct: 266 RKSGCEPDVEVYEVTLHSLCDAGKGEIALEIYKEMVQREMEPNLSLYKMLLNCLAKSGDV 325

Query: 622 SDAYHLLQGMLNLGLKPSLQTYTLLL-SCCTEAR 654
           S    +   M+ +   P    +  +L S C   R
Sbjct: 326 SAVQSVADDMIRVSQIPEHDVHVCVLKSYCVAGR 359



 Score = 48.5 bits (114), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 29/120 (24%), Positives = 55/120 (45%)

Query: 530 GFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKA 589
           GF     TY+ ++   G        + +  EM + +   D   + +L+  +GKA  + KA
Sbjct: 199 GFCHTTKTYNTMLYTAGEAREFSVVDVLLEEMEKYSCERDIKTWTILIRQYGKAKLIGKA 258

Query: 590 WEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSC 649
              +E M ++G  P+V      L +    G+   A  + + M+   ++P+L  Y +LL+C
Sbjct: 259 LLVHEKMRKSGCEPDVEVYEVTLHSLCDAGKGEIALEIYKEMVQREMEPNLSLYKMLLNC 318


>gi|449499490|ref|XP_004160831.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
           mitochondrial-like [Cucumis sativus]
          Length = 1000

 Score =  159 bits (401), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 93/316 (29%), Positives = 157/316 (49%), Gaps = 17/316 (5%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           +  G   D +TYT ++    +A      +  LD+MVRDGC+P VVTY  LIH+Y +A  +
Sbjct: 516 KGTGVVPDVYTYTILIDCFSKAGIIKQAHNWLDEMVRDGCEPTVVTYTTLIHAYLKAKKV 575

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDT------ 465
           + A ++F+ M   GC P+ +TY  LID + K+G ++ A  +Y +M+     PD       
Sbjct: 576 SVANELFELMIAKGCFPNVITYTALIDGYCKSGNIEKACQIYARMRGDADIPDVDMYFKI 635

Query: 466 ----------FTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARN 515
                      TY  +++ L KA  ++ A  L   M   GC PN + Y+ +I    KA  
Sbjct: 636 KNNVAEKPNVVTYGALVDGLCKAHKVKDARDLLETMFVDGCEPNTIVYDALIDGFCKAAK 695

Query: 516 YQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGL 575
              A +++  M   G+ P+  TYS +++ L     LD    V ++M   +  P+  +Y  
Sbjct: 696 LDEAQEVFHKMVERGYNPNVYTYSSLIDRLFKDKRLDLVLKVLSKMLENSCAPNIVIYTE 755

Query: 576 LVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLG 635
           ++D   K     +A++    M + G +PNV T  +++  F + G++     L + M + G
Sbjct: 756 MIDGLSKVAKTDEAYKLMLMMEEKGCKPNVVTYTAMIDGFGKAGKVDKCLELFREMGSKG 815

Query: 636 LKPSLQTYTLLLS-CC 650
             P+  TYT+L++ CC
Sbjct: 816 CAPNFVTYTVLINHCC 831



 Score =  146 bits (369), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 96/323 (29%), Positives = 155/323 (47%), Gaps = 39/323 (12%)

Query: 362 TYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQM 421
           TY  +V  L +A +      LL+ M  DGC+PN + Y+ LI  + +A  L+EA +VF +M
Sbjct: 647 TYGALVDGLCKAHKVKDARDLLETMFVDGCEPNTIVYDALIDGFCKAAKLDEAQEVFHKM 706

Query: 422 QVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHL 481
              G  P+  TY +LID   K   LD+ + +  KM     +P+   Y+ +I+ L K    
Sbjct: 707 VERGYNPNVYTYSSLIDRLFKDKRLDLVLKVLSKMLENSCAPNIVIYTEMIDGLSKVAKT 766

Query: 482 QAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIV 541
             A++L   M  +GC PN+VTY  MI    KA      L+L+R+M + G  P+ VTY+++
Sbjct: 767 DEAYKLMLMMEEKGCKPNVVTYTAMIDGFGKAGKVDKCLELFREMGSKGCAPNFVTYTVL 826

Query: 542 MEVLGHCGYLDEAEAVFAEMRRKNW---------------------------------VP 568
           +      G+LDEA A+  EM++  W                                  P
Sbjct: 827 INHCCATGHLDEAYALLEEMKQTYWPKHVSSYCKVIEGYKREFILSLGLLEEVEKNGSAP 886

Query: 569 DEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGL----RPNVPTCNSLLSAFLRVGQLSDA 624
              +Y +L+D + KAG +  A E ++ ++ A +    + N+ T  SL+ +F    ++  A
Sbjct: 887 TILLYKVLIDNFVKAGRLEVALELHKEVISASMSMTAKKNLYT--SLIYSFSYASKIDHA 944

Query: 625 YHLLQGMLNLGLKPSLQTYTLLL 647
           + L   M+  G+ P L T+  LL
Sbjct: 945 FELFYDMIRDGVIPDLGTFVHLL 967



 Score =  139 bits (349), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 88/309 (28%), Positives = 145/309 (46%), Gaps = 16/309 (5%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           GF  D  TY+ ++G L  A +      L  +M   G  P+V TY  LI  + +A  + +A
Sbjct: 484 GFVPDTSTYSEVIGFLCNASRVENAFFLFKEMKGTGVVPDVYTYTILIDCFSKAGIIKQA 543

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
            +   +M   GCEP  VTY TLI  + KA  + VA ++++ M A G  P+  TY+ +I+ 
Sbjct: 544 HNWLDEMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFELMIAKGCFPNVITYTALIDG 603

Query: 475 LGKAGHLQAAHQLFCEMVNQGCI----------------PNLVTYNIMIALQAKARNYQS 518
             K+G+++ A Q++  M     I                PN+VTY  ++    KA   + 
Sbjct: 604 YCKSGNIEKACQIYARMRGDADIPDVDMYFKIKNNVAEKPNVVTYGALVDGLCKAHKVKD 663

Query: 519 ALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVD 578
           A  L   M   G EP+ + Y  +++       LDEA+ VF +M  + + P+   Y  L+D
Sbjct: 664 ARDLLETMFVDGCEPNTIVYDALIDGFCKAAKLDEAQEVFHKMVERGYNPNVYTYSSLID 723

Query: 579 LWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKP 638
              K   +    +    ML+    PN+     ++    +V +  +AY L+  M   G KP
Sbjct: 724 RLFKDKRLDLVLKVLSKMLENSCAPNIVIYTEMIDGLSKVAKTDEAYKLMLMMEEKGCKP 783

Query: 639 SLQTYTLLL 647
           ++ TYT ++
Sbjct: 784 NVVTYTAMI 792



 Score =  137 bits (345), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 88/293 (30%), Positives = 147/293 (50%), Gaps = 26/293 (8%)

Query: 376 FGAINKLLDQMVRDGC---QPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVT 432
           F    K  ++M+  G    + NVV++ R +  +G+     +A  V  +M   G  PD  T
Sbjct: 435 FELAEKAYNEMLSAGTVLNKVNVVSFARCLCGFGK---FEKAYKVIHEMMGNGFVPDTST 491

Query: 433 YCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMV 492
           Y  +I     A  ++ A  ++K+M+  G+ PD +TY+++I+C  KAG ++ AH    EMV
Sbjct: 492 YSEVIGFLCNASRVENAFFLFKEMKGTGVVPDVYTYTILIDCFSKAGIIKQAHNWLDEMV 551

Query: 493 NQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHC--GY 550
             GC P +VTY  +I    KA+    A +L+  M   G  P+ +TY+ +++  G+C  G 
Sbjct: 552 RDGCEPTVVTYTTLIHAYLKAKKVSVANELFELMIAKGCFPNVITYTALID--GYCKSGN 609

Query: 551 LDEAEAVFAEMR-------------RKNWVPDEP---VYGLLVDLWGKAGNVRKAWEWYE 594
           +++A  ++A MR              KN V ++P    YG LVD   KA  V+ A +  E
Sbjct: 610 IEKACQIYARMRGDADIPDVDMYFKIKNNVAEKPNVVTYGALVDGLCKAHKVKDARDLLE 669

Query: 595 AMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
            M   G  PN    ++L+  F +  +L +A  +   M+  G  P++ TY+ L+
Sbjct: 670 TMFVDGCEPNTIVYDALIDGFCKAAKLDEAQEVFHKMVERGYNPNVYTYSSLI 722



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 81/289 (28%), Positives = 140/289 (48%), Gaps = 16/289 (5%)

Query: 375 QFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYC 434
           +F    K++ +M+ +G  P+  TY+ +I     A+ +  A  +FK+M+  G  PD  TY 
Sbjct: 469 KFEKAYKVIHEMMGNGFVPDTSTYSEVIGFLCNASRVENAFFLFKEMKGTGVVPDVYTYT 528

Query: 435 TLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQ 494
            LID  +KAG +  A +   +M   G  P   TY+ +I+   KA  +  A++LF  M+ +
Sbjct: 529 ILIDCFSKAGIIKQAHNWLDEMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFELMIAK 588

Query: 495 GCIPNLVTYNIMIALQAKARNYQSALKLYRDMQ----------------NAGFEPDKVTY 538
           GC PN++TY  +I    K+ N + A ++Y  M+                N   +P+ VTY
Sbjct: 589 GCFPNVITYTALIDGYCKSGNIEKACQIYARMRGDADIPDVDMYFKIKNNVAEKPNVVTY 648

Query: 539 SIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQ 598
             +++ L     + +A  +   M      P+  VY  L+D + KA  + +A E +  M++
Sbjct: 649 GALVDGLCKAHKVKDARDLLETMFVDGCEPNTIVYDALIDGFCKAAKLDEAQEVFHKMVE 708

Query: 599 AGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
            G  PNV T +SL+    +  +L     +L  ML     P++  YT ++
Sbjct: 709 RGYNPNVYTYSSLIDRLFKDKRLDLVLKVLSKMLENSCAPNIVIYTEMI 757



 Score =  108 bits (269), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 97/448 (21%), Positives = 174/448 (38%), Gaps = 110/448 (24%)

Query: 332 QVLKQLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRA------RQF--------- 376
           ++L  L+   + + FF W  RQ G+ H    Y  ++ +  R        +F         
Sbjct: 143 EILSFLKSPELCVKFFLWAGRQIGYDHTPAVYIALLDVFERGSYDRVPEEFLREIRGDDK 202

Query: 377 GAINKLLDQMVRDGC--------------------QPNVVTYNRLIHSYGRANYLNEALD 416
             + KLL+ ++R  C                    +P  +TYN L+  + RA+ L+ A  
Sbjct: 203 EVLGKLLNVLIRKCCRNGLWNVALEELGRLKDFGYKPTRMTYNALVQVFLRADKLDTAQL 262

Query: 417 VFKQMQVVG---------------CE-----------------PDRVTYCTLIDIHAKAG 444
           V ++M  +G               C+                 P+ + Y  +I    +A 
Sbjct: 263 VHREMSELGLSMDEFTLGFFAQALCKVGKWREALSLIEKEDFVPNTILYNKMISGLCEAS 322

Query: 445 FLDVAMDMYKKMQAAGLSPDTFTYSVII-NCLGKAGHLQAAHQLFCEMVNQGCIPNLVTY 503
           F + AMD   +M++    P+  TY +++  CL K   L    ++   M+ +GC P+   +
Sbjct: 323 FFEEAMDFLNRMRSTSCIPNVQTYRILLCGCLNKK-QLGRCKRILSMMIAEGCYPSYTIF 381

Query: 504 NIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVM--------------------- 542
           N ++    K+ ++  A KL + M+    +P  V Y+I++                     
Sbjct: 382 NSLVHAYCKSDDFSYAYKLLKKMEKCECKPGYVVYNILIGSICSGGELPGPVTFELAEKA 441

Query: 543 --EVLGH----------------CGY--LDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGK 582
             E+L                  CG+   ++A  V  EM    +VPD   Y  ++     
Sbjct: 442 YNEMLSAGTVLNKVNVVSFARCLCGFGKFEKAYKVIHEMMGNGFVPDTSTYSEVIGFLCN 501

Query: 583 AGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQT 642
           A  V  A+  ++ M   G+ P+V T   L+  F + G +  A++ L  M+  G +P++ T
Sbjct: 502 ASRVENAFFLFKEMKGTGVVPDVYTYTILIDCFSKAGIIKQAHNWLDEMVRDGCEPTVVT 561

Query: 643 YTLLLSCCTEARSPYDMGFCHELMAVSG 670
           YT L+    +A+         ELM   G
Sbjct: 562 YTTLIHAYLKAKKVSVANELFELMIAKG 589



 Score = 74.3 bits (181), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 54/208 (25%), Positives = 93/208 (44%), Gaps = 35/208 (16%)

Query: 350 LRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRAN 409
           +  + G K +  TYT M+   G+A +     +L  +M   GC PN VTY  LI+      
Sbjct: 775 MMEEKGCKPNVVTYTAMIDGFGKAGKVDKCLELFREMGSKGCAPNFVTYTVLINHCCATG 834

Query: 410 YLNEALDVFKQMQVV---------------------------------GCEPDRVTYCTL 436
           +L+EA  + ++M+                                   G  P  + Y  L
Sbjct: 835 HLDEAYALLEEMKQTYWPKHVSSYCKVIEGYKREFILSLGLLEEVEKNGSAPTILLYKVL 894

Query: 437 IDIHAKAGFLDVAMDMYKKMQAAGLS--PDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQ 494
           ID   KAG L+VA++++K++ +A +S       Y+ +I     A  +  A +LF +M+  
Sbjct: 895 IDNFVKAGRLEVALELHKEVISASMSMTAKKNLYTSLIYSFSYASKIDHAFELFYDMIRD 954

Query: 495 GCIPNLVTYNIMIALQAKARNYQSALKL 522
           G IP+L T+  ++    + R ++ AL+L
Sbjct: 955 GVIPDLGTFVHLLMGLIRVRRWEEALQL 982


>gi|125580078|gb|EAZ21224.1| hypothetical protein OsJ_36877 [Oryza sativa Japonica Group]
          Length = 726

 Score =  159 bits (401), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 101/361 (27%), Positives = 176/361 (48%), Gaps = 6/361 (1%)

Query: 293 STGNVVESVSRILR-QWKWGPLAEEALGNTNYSMDAYQANQVLKQLQ--DHTVALGFFNW 349
           S   +V    R+L  +  W P  E  L      +   Q   VL+     D   A  FF W
Sbjct: 57  SRSRLVRDTCRLLELRESWSPKLEAQLRQLLRVLSPPQVRAVLRAQARGDVRRAFEFFRW 116

Query: 350 LRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRAN 409
             RQ  ++H    +  M+ +L   R      +++  M+R G +     + +L+ SY RA 
Sbjct: 117 ADRQWRYRHAPEVFDEMLSLLSNTRLHDPARRVVRLMIRRGVRRGTEQFAQLMLSYSRAG 176

Query: 410 YLNEALDVFKQMQVVGCEPDRVTYCTL-IDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTY 468
            L  A+ V   MQ  GC PD ++ C + +++   AG +D A++  ++M+  G+ PD +TY
Sbjct: 177 KLRSAMRVLHLMQKDGCAPD-ISICNMAVNVLVVAGRVDKALEFAERMRRVGVEPDVYTY 235

Query: 469 SVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQN 528
           + +I  L  A  +  A ++   M+  GC P+ ++Y  +++   K +  +    L + M+N
Sbjct: 236 NCLIKGLCGARRVVDAMEMIGVMLQNGCPPDKISYYTVMSFLCKEKRVEEVRGLLQRMRN 295

Query: 529 -AGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVR 587
            AG  PD+VTY++++  L   G+ DEA     E   K +  DE  Y  +V  +   G + 
Sbjct: 296 DAGLFPDQVTYNVLIHGLAKHGHADEALEFLRESEGKRFRVDEVGYSAIVHSFCLNGRMA 355

Query: 588 KAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
           +A E    M+  G +P+V T ++++  F R+G+L  A  +++ M     KP+  T+T LL
Sbjct: 356 EAKEIVGEMISKGCQPDVVTYSTVVDGFCRIGELDQARKMMKHMYKNDCKPNTVTHTALL 415

Query: 648 S 648
           +
Sbjct: 416 N 416



 Score =  108 bits (271), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 74/280 (26%), Positives = 124/280 (44%), Gaps = 1/280 (0%)

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRD-GCQPNVVTYNRLIHSYGRANYL 411
           Q G   D+ +Y T++  L + ++   +  LL +M  D G  P+ VTYN LIH   +  + 
Sbjct: 260 QNGCPPDKISYYTVMSFLCKEKRVEEVRGLLQRMRNDAGLFPDQVTYNVLIHGLAKHGHA 319

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
           +EAL+  ++ +      D V Y  ++      G +  A ++  +M + G  PD  TYS +
Sbjct: 320 DEALEFLRESEGKRFRVDEVGYSAIVHSFCLNGRMAEAKEIVGEMISKGCQPDVVTYSTV 379

Query: 472 INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF 531
           ++   + G L  A ++   M    C PN VT+  ++    K      A +L    +   +
Sbjct: 380 VDGFCRIGELDQARKMMKHMYKNDCKPNTVTHTALLNGLCKVGKTSEAWELLNKSEEEWW 439

Query: 532 EPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWE 591
            P  +TYS+VM      G L E+  V  +M +K + P      LL+    K     +A +
Sbjct: 440 TPSDITYSVVMHGFRREGKLKESCDVVVQMLQKGFFPTTVEINLLIHALCKDRKPAEAKD 499

Query: 592 WYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGM 631
           + E     G   NV    +++  F R G L  A  L+  M
Sbjct: 500 FMEQCQSKGCTINVVNFTTVIHGFSRQGDLESALSLMDDM 539



 Score =  106 bits (265), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 77/296 (26%), Positives = 137/296 (46%), Gaps = 2/296 (0%)

Query: 326 DAYQANQVLKQLQDHTVALGFFNWLRRQAG--FKHDEHTYTTMVGILGRARQFGAINKLL 383
           D    N ++  L  H  A     +LR   G  F+ DE  Y+ +V       +     +++
Sbjct: 302 DQVTYNVLIHGLAKHGHADEALEFLRESEGKRFRVDEVGYSAIVHSFCLNGRMAEAKEIV 361

Query: 384 DQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKA 443
            +M+  GCQP+VVTY+ ++  + R   L++A  + K M    C+P+ VT+  L++   K 
Sbjct: 362 GEMISKGCQPDVVTYSTVVDGFCRIGELDQARKMMKHMYKNDCKPNTVTHTALLNGLCKV 421

Query: 444 GFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTY 503
           G    A ++  K +    +P   TYSV+++   + G L+ +  +  +M+ +G  P  V  
Sbjct: 422 GKTSEAWELLNKSEEEWWTPSDITYSVVMHGFRREGKLKESCDVVVQMLQKGFFPTTVEI 481

Query: 504 NIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRR 563
           N++I    K R    A       Q+ G   + V ++ V+      G L+ A ++  +M  
Sbjct: 482 NLLIHALCKDRKPAEAKDFMEQCQSKGCTINVVNFTTVIHGFSRQGDLESALSLMDDMYL 541

Query: 564 KNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVG 619
            N  PD   Y ++VD  GK G +++A    E ML  G+ P   T  +++  +   G
Sbjct: 542 SNRHPDVVTYTVVVDALGKKGRLKEATGLVEKMLNRGVLPTPVTYRTVIHRYCEKG 597



 Score = 43.1 bits (100), Expect = 0.71,   Method: Compositional matrix adjust.
 Identities = 30/136 (22%), Positives = 57/136 (41%)

Query: 537 TYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAM 596
            +  ++ +L +    D A  V   M R+        +  L+  + +AG +R A      M
Sbjct: 129 VFDEMLSLLSNTRLHDPARRVVRLMIRRGVRRGTEQFAQLMLSYSRAGKLRSAMRVLHLM 188

Query: 597 LQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSP 656
            + G  P++  CN  ++  +  G++  A    + M  +G++P + TY  L+     AR  
Sbjct: 189 QKDGCAPDISICNMAVNVLVVAGRVDKALEFAERMRRVGVEPDVYTYNCLIKGLCGARRV 248

Query: 657 YDMGFCHELMAVSGHP 672
            D      +M  +G P
Sbjct: 249 VDAMEMIGVMLQNGCP 264


>gi|226507918|ref|NP_001144813.1| uncharacterized protein LOC100277891 [Zea mays]
 gi|195647376|gb|ACG43156.1| hypothetical protein [Zea mays]
          Length = 597

 Score =  159 bits (401), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 81/302 (26%), Positives = 157/302 (51%), Gaps = 4/302 (1%)

Query: 357 KHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALD 416
           + +  TY  M+ + G+A Q  +  ++  +M   GC+PN+ TY  L++++ R     +A +
Sbjct: 274 RTNTZTYXLMINVYGKANQPMSSLRVFREMKSVGCKPNICTYTALVNAFAREGLCEKAEE 333

Query: 417 VFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLG 476
           VF++MQ  G EPD   Y  L++ +++AG    A +++  M+  G  PD  +Y+++++  G
Sbjct: 334 VFEEMQQAGHEPDVYAYNALMEAYSRAGLPQGASEIFSLMEHMGCEPDRASYNILVDAFG 393

Query: 477 KAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKV 536
           +AG  Q A   F E+  QG  P + ++ ++++  A++ N     ++   +  +G  PD  
Sbjct: 394 RAGLHQEAEAAFQELKQQGMRPTMKSHMLLLSAHARSGNVARCEEVMAQLHKSGLRPDTF 453

Query: 537 TYSIVMEVLGHCGYLDEAEAVFAEMRRKNWV----PDEPVYGLLVDLWGKAGNVRKAWEW 592
             + ++   G  G LD+ E +FA M R +      PD   Y +LV+ +G+AG + +    
Sbjct: 454 ALNAMLNAYGRAGRLDDMERLFAAMERGDGASAGAPDTSTYNVLVNAYGRAGYLDRMEAA 513

Query: 593 YEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTE 652
           + ++   GL  +V T  S + A+ R  +      + + M++ G  P   T  +LL+ C++
Sbjct: 514 FRSLAARGLAADVVTWTSRIGAYARKKEYGQCLRVFEEMVDAGCYPDAGTAKVLLAACSD 573

Query: 653 AR 654
            R
Sbjct: 574 ER 575



 Score =  146 bits (368), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 113/408 (27%), Positives = 185/408 (45%), Gaps = 16/408 (3%)

Query: 348 NWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGR 407
            W+ R++ F+ D   Y  ++   G+ RQ          ++   C P   TY  L+ +Y  
Sbjct: 160 EWVLRRSSFRPDIICYNLLIDAYGQKRQLSEAEAAYMALLEARCVPTEDTYALLLRAYCG 219

Query: 408 ANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFT 467
           +  L+ A  V  +MQ  G  P    Y   +D   KA   + A+++Y++M+      +T T
Sbjct: 220 SGQLHRAEGVISEMQRNGIPPTATVYNAYLDGLLKARCSEKAVEVYQRMKKERCRTNTZT 279

Query: 468 YSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQ 527
           Y ++IN  GKA    ++ ++F EM + GC PN+ TY  ++   A+    + A +++ +MQ
Sbjct: 280 YXLMINVYGKANQPMSSLRVFREMKSVGCKPNICTYTALVNAFAREGLCEKAEEVFEEMQ 339

Query: 528 NAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVR 587
            AG EPD   Y+ +ME     G    A  +F+ M      PD   Y +LVD +G+AG  +
Sbjct: 340 QAGHEPDVYAYNALMEAYSRAGLPQGASEIFSLMEHMGCEPDRASYNILVDAFGRAGLHQ 399

Query: 588 KAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
           +A   ++ + Q G+RP + +   LLSA  R G ++    ++  +   GL+P       +L
Sbjct: 400 EAEAAFQELKQQGMRPTMKSHMLLLSAHARSGNVARCEEVMAQLHKSGLRPDTFALNAML 459

Query: 648 SCCTEARSPYDMGFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHV---GSFLEMMHSE 704
           +    A    DM      M   G  A     S  +P     NV  +      +L+ M + 
Sbjct: 460 NAYGRAGRLDDMERLFAAME-RGDGA-----SAGAPDTSTYNVLVNAYGRAGYLDRMEAA 513

Query: 705 DRE-SKRGLVDAVVDFLHKSGL---KEEAGS---VWEVAAQKNVYPDA 745
            R  + RGL   VV +  + G    K+E G    V+E       YPDA
Sbjct: 514 FRSLAARGLAADVVTWTSRIGAYARKKEYGQCLRVFEEMVDAGCYPDA 561



 Score = 89.7 bits (221), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 60/250 (24%), Positives = 110/250 (44%), Gaps = 42/250 (16%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           +QAG + D + Y  ++    RA      +++   M   GC+P+  +YN L+ ++GRA   
Sbjct: 339 QQAGHEPDVYAYNALMEAYSRAGLPQGASEIFSLMEHMGCEPDRASYNILVDAFGRAGLH 398

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTF----- 466
            EA   F++++  G  P   ++  L+  HA++G +    ++  ++  +GL PDTF     
Sbjct: 399 QEAEAAFQELKQQGMRPTMKSHMLLLSAHARSGNVARCEEVMAQLHKSGLRPDTFALNAM 458

Query: 467 ----------------------------------TYSVIINCLGKAGHLQAAHQLFCEMV 492
                                             TY+V++N  G+AG+L      F  + 
Sbjct: 459 LNAYGRAGRLDDMERLFAAMERGDGASAGAPDTSTYNVLVNAYGRAGYLDRMEAAFRSLA 518

Query: 493 NQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLD 552
            +G   ++VT+   I   A+ + Y   L+++ +M +AG  PD  T  +   +L  C    
Sbjct: 519 ARGLAADVVTWTSRIGAYARKKEYGQCLRVFEEMVDAGCYPDAGTAKV---LLAACSDER 575

Query: 553 EAEAVFAEMR 562
           + E V A +R
Sbjct: 576 QVEQVTAIVR 585


>gi|449446442|ref|XP_004140980.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
           mitochondrial-like [Cucumis sativus]
          Length = 1000

 Score =  159 bits (401), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 93/316 (29%), Positives = 157/316 (49%), Gaps = 17/316 (5%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           +  G   D +TYT ++    +A      +  LD+MVRDGC+P VVTY  LIH+Y +A  +
Sbjct: 516 KGTGVVPDVYTYTILIDCFSKAGIIKQAHNWLDEMVRDGCEPTVVTYTTLIHAYLKAKKV 575

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDT------ 465
           + A ++F+ M   GC P+ +TY  LID + K+G ++ A  +Y +M+     PD       
Sbjct: 576 SVANELFELMIAKGCFPNVITYTALIDGYCKSGNIEKACQIYARMRGDADIPDVDMYFKI 635

Query: 466 ----------FTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARN 515
                      TY  +++ L KA  ++ A  L   M   GC PN + Y+ +I    KA  
Sbjct: 636 KNNVAEKPNVVTYGALVDGLCKAHKVKDARDLLETMFVDGCEPNTIVYDALIDGFCKAAK 695

Query: 516 YQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGL 575
              A +++  M   G+ P+  TYS +++ L     LD    V ++M   +  P+  +Y  
Sbjct: 696 LDEAQEVFHKMVEHGYNPNVYTYSSLIDRLFKDKRLDLVLKVLSKMLENSCAPNIVIYTE 755

Query: 576 LVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLG 635
           ++D   K     +A++    M + G +PNV T  +++  F + G++     L + M + G
Sbjct: 756 MIDGLSKVAKTDEAYKLMLMMEEKGCKPNVVTYTAMIDGFGKAGKVDKCLELFREMGSKG 815

Query: 636 LKPSLQTYTLLLS-CC 650
             P+  TYT+L++ CC
Sbjct: 816 CAPNFVTYTVLINHCC 831



 Score =  145 bits (367), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 96/323 (29%), Positives = 155/323 (47%), Gaps = 39/323 (12%)

Query: 362 TYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQM 421
           TY  +V  L +A +      LL+ M  DGC+PN + Y+ LI  + +A  L+EA +VF +M
Sbjct: 647 TYGALVDGLCKAHKVKDARDLLETMFVDGCEPNTIVYDALIDGFCKAAKLDEAQEVFHKM 706

Query: 422 QVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHL 481
              G  P+  TY +LID   K   LD+ + +  KM     +P+   Y+ +I+ L K    
Sbjct: 707 VEHGYNPNVYTYSSLIDRLFKDKRLDLVLKVLSKMLENSCAPNIVIYTEMIDGLSKVAKT 766

Query: 482 QAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIV 541
             A++L   M  +GC PN+VTY  MI    KA      L+L+R+M + G  P+ VTY+++
Sbjct: 767 DEAYKLMLMMEEKGCKPNVVTYTAMIDGFGKAGKVDKCLELFREMGSKGCAPNFVTYTVL 826

Query: 542 MEVLGHCGYLDEAEAVFAEMRRKNW---------------------------------VP 568
           +      G+LDEA A+  EM++  W                                  P
Sbjct: 827 INHCCATGHLDEAYALLEEMKQTYWPKHVSSYCKVIEGYKREFILSLGLLEEVEKNGSAP 886

Query: 569 DEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGL----RPNVPTCNSLLSAFLRVGQLSDA 624
              +Y +L+D + KAG +  A E ++ ++ A +    + N+ T  SL+ +F    ++  A
Sbjct: 887 IILLYKVLIDNFVKAGRLEVALELHKEVISASMSMAAKKNLYT--SLIYSFSYASKIGHA 944

Query: 625 YHLLQGMLNLGLKPSLQTYTLLL 647
           + L   M+  G+ P L T+  LL
Sbjct: 945 FELFYDMIRDGVIPDLGTFVHLL 967



 Score =  137 bits (346), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 88/309 (28%), Positives = 144/309 (46%), Gaps = 16/309 (5%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           GF  D  TY+ ++G L  A +      L  +M   G  P+V TY  LI  + +A  + +A
Sbjct: 484 GFVPDTSTYSEVIGFLCNASRVENAFFLFKEMKGTGVVPDVYTYTILIDCFSKAGIIKQA 543

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
            +   +M   GCEP  VTY TLI  + KA  + VA ++++ M A G  P+  TY+ +I+ 
Sbjct: 544 HNWLDEMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFELMIAKGCFPNVITYTALIDG 603

Query: 475 LGKAGHLQAAHQLFCEMVNQGCI----------------PNLVTYNIMIALQAKARNYQS 518
             K+G+++ A Q++  M     I                PN+VTY  ++    KA   + 
Sbjct: 604 YCKSGNIEKACQIYARMRGDADIPDVDMYFKIKNNVAEKPNVVTYGALVDGLCKAHKVKD 663

Query: 519 ALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVD 578
           A  L   M   G EP+ + Y  +++       LDEA+ VF +M    + P+   Y  L+D
Sbjct: 664 ARDLLETMFVDGCEPNTIVYDALIDGFCKAAKLDEAQEVFHKMVEHGYNPNVYTYSSLID 723

Query: 579 LWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKP 638
              K   +    +    ML+    PN+     ++    +V +  +AY L+  M   G KP
Sbjct: 724 RLFKDKRLDLVLKVLSKMLENSCAPNIVIYTEMIDGLSKVAKTDEAYKLMLMMEEKGCKP 783

Query: 639 SLQTYTLLL 647
           ++ TYT ++
Sbjct: 784 NVVTYTAMI 792



 Score =  137 bits (344), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 88/293 (30%), Positives = 147/293 (50%), Gaps = 26/293 (8%)

Query: 376 FGAINKLLDQMVRDGC---QPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVT 432
           F    K  ++M+  G    + NVV++ R +  +G+     +A  V  +M   G  PD  T
Sbjct: 435 FELAEKAYNEMLSAGTVLNKVNVVSFARCLCGFGK---FEKAYKVIHEMMGNGFVPDTST 491

Query: 433 YCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMV 492
           Y  +I     A  ++ A  ++K+M+  G+ PD +TY+++I+C  KAG ++ AH    EMV
Sbjct: 492 YSEVIGFLCNASRVENAFFLFKEMKGTGVVPDVYTYTILIDCFSKAGIIKQAHNWLDEMV 551

Query: 493 NQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHC--GY 550
             GC P +VTY  +I    KA+    A +L+  M   G  P+ +TY+ +++  G+C  G 
Sbjct: 552 RDGCEPTVVTYTTLIHAYLKAKKVSVANELFELMIAKGCFPNVITYTALID--GYCKSGN 609

Query: 551 LDEAEAVFAEMR-------------RKNWVPDEP---VYGLLVDLWGKAGNVRKAWEWYE 594
           +++A  ++A MR              KN V ++P    YG LVD   KA  V+ A +  E
Sbjct: 610 IEKACQIYARMRGDADIPDVDMYFKIKNNVAEKPNVVTYGALVDGLCKAHKVKDARDLLE 669

Query: 595 AMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
            M   G  PN    ++L+  F +  +L +A  +   M+  G  P++ TY+ L+
Sbjct: 670 TMFVDGCEPNTIVYDALIDGFCKAAKLDEAQEVFHKMVEHGYNPNVYTYSSLI 722



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 81/289 (28%), Positives = 140/289 (48%), Gaps = 16/289 (5%)

Query: 375 QFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYC 434
           +F    K++ +M+ +G  P+  TY+ +I     A+ +  A  +FK+M+  G  PD  TY 
Sbjct: 469 KFEKAYKVIHEMMGNGFVPDTSTYSEVIGFLCNASRVENAFFLFKEMKGTGVVPDVYTYT 528

Query: 435 TLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQ 494
            LID  +KAG +  A +   +M   G  P   TY+ +I+   KA  +  A++LF  M+ +
Sbjct: 529 ILIDCFSKAGIIKQAHNWLDEMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFELMIAK 588

Query: 495 GCIPNLVTYNIMIALQAKARNYQSALKLYRDMQ----------------NAGFEPDKVTY 538
           GC PN++TY  +I    K+ N + A ++Y  M+                N   +P+ VTY
Sbjct: 589 GCFPNVITYTALIDGYCKSGNIEKACQIYARMRGDADIPDVDMYFKIKNNVAEKPNVVTY 648

Query: 539 SIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQ 598
             +++ L     + +A  +   M      P+  VY  L+D + KA  + +A E +  M++
Sbjct: 649 GALVDGLCKAHKVKDARDLLETMFVDGCEPNTIVYDALIDGFCKAAKLDEAQEVFHKMVE 708

Query: 599 AGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
            G  PNV T +SL+    +  +L     +L  ML     P++  YT ++
Sbjct: 709 HGYNPNVYTYSSLIDRLFKDKRLDLVLKVLSKMLENSCAPNIVIYTEMI 757



 Score =  108 bits (269), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 97/448 (21%), Positives = 174/448 (38%), Gaps = 110/448 (24%)

Query: 332 QVLKQLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRA------RQF--------- 376
           ++L  L+   + + FF W  RQ G+ H    Y  ++ +  R        +F         
Sbjct: 143 EILSFLKSPELCVKFFLWAGRQIGYDHTPAVYIALLDVFERGSYDRVPEEFLREIRGDDK 202

Query: 377 GAINKLLDQMVRDGC--------------------QPNVVTYNRLIHSYGRANYLNEALD 416
             + KLL+ ++R  C                    +P  +TYN L+  + RA+ L+ A  
Sbjct: 203 EVLGKLLNVLIRKCCRNGLWNVALEELGRLKDFGYKPTRMTYNALVQVFLRADKLDTAQL 262

Query: 417 VFKQMQVVG---------------CE-----------------PDRVTYCTLIDIHAKAG 444
           V ++M  +G               C+                 P+ + Y  +I    +A 
Sbjct: 263 VHREMSELGLSMDEFTLGFFAQALCKVGKWREALSLIEKEDFVPNTILYNKMISGLCEAS 322

Query: 445 FLDVAMDMYKKMQAAGLSPDTFTYSVII-NCLGKAGHLQAAHQLFCEMVNQGCIPNLVTY 503
           F + AMD   +M++    P+  TY +++  CL K   L    ++   M+ +GC P+   +
Sbjct: 323 FFEEAMDFLNRMRSTSCIPNVQTYRILLCGCLNKK-QLGRCKRILSMMIAEGCYPSYTIF 381

Query: 504 NIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVM--------------------- 542
           N ++    K+ ++  A KL + M+    +P  V Y+I++                     
Sbjct: 382 NSLVHAYCKSDDFSYAYKLLKKMEKCECKPGYVVYNILIGSICSGGELPGPVTFELAEKA 441

Query: 543 --EVLGH----------------CGY--LDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGK 582
             E+L                  CG+   ++A  V  EM    +VPD   Y  ++     
Sbjct: 442 YNEMLSAGTVLNKVNVVSFARCLCGFGKFEKAYKVIHEMMGNGFVPDTSTYSEVIGFLCN 501

Query: 583 AGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQT 642
           A  V  A+  ++ M   G+ P+V T   L+  F + G +  A++ L  M+  G +P++ T
Sbjct: 502 ASRVENAFFLFKEMKGTGVVPDVYTYTILIDCFSKAGIIKQAHNWLDEMVRDGCEPTVVT 561

Query: 643 YTLLLSCCTEARSPYDMGFCHELMAVSG 670
           YT L+    +A+         ELM   G
Sbjct: 562 YTTLIHAYLKAKKVSVANELFELMIAKG 589



 Score = 72.8 bits (177), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 54/208 (25%), Positives = 93/208 (44%), Gaps = 35/208 (16%)

Query: 350 LRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRAN 409
           +  + G K +  TYT M+   G+A +     +L  +M   GC PN VTY  LI+      
Sbjct: 775 MMEEKGCKPNVVTYTAMIDGFGKAGKVDKCLELFREMGSKGCAPNFVTYTVLINHCCATG 834

Query: 410 YLNEALDVFKQMQVV---------------------------------GCEPDRVTYCTL 436
           +L+EA  + ++M+                                   G  P  + Y  L
Sbjct: 835 HLDEAYALLEEMKQTYWPKHVSSYCKVIEGYKREFILSLGLLEEVEKNGSAPIILLYKVL 894

Query: 437 IDIHAKAGFLDVAMDMYKKMQAAGLS--PDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQ 494
           ID   KAG L+VA++++K++ +A +S       Y+ +I     A  +  A +LF +M+  
Sbjct: 895 IDNFVKAGRLEVALELHKEVISASMSMAAKKNLYTSLIYSFSYASKIGHAFELFYDMIRD 954

Query: 495 GCIPNLVTYNIMIALQAKARNYQSALKL 522
           G IP+L T+  ++    + R ++ AL+L
Sbjct: 955 GVIPDLGTFVHLLMGLIRVRRWEEALQL 982


>gi|357118714|ref|XP_003561096.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At5g39710-like [Brachypodium distachyon]
          Length = 718

 Score =  159 bits (401), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 114/406 (28%), Positives = 197/406 (48%), Gaps = 13/406 (3%)

Query: 355 GFKHDEHTYTTMV-GILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNE 413
           G   + +TY  +V  +  R ++  A+  + D M   GC PNVVTYN L+ ++ RA  ++ 
Sbjct: 149 GVAPNVYTYNILVRALCARGQREEALGVVGDDMRGAGCAPNVVTYNTLVAAFCRAGEVDA 208

Query: 414 ALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIIN 473
           A  +   M+  G  P  VT+ T+++   KAG ++ A  M+ +M   GL+PD  +Y+ +++
Sbjct: 209 AERLVGVMREGGVRPSLVTFNTVVNGLCKAGRMEDARKMFDEMAREGLTPDGVSYNTLVS 268

Query: 474 CLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEP 533
              KAG L  A  +F EM  +G +P++VT+  +I    +A N + A+ L   M+  G   
Sbjct: 269 GYCKAGCLHEALAVFAEMAQKGVVPDVVTFTSLIHAMCRAGNLERAVALVGQMRERGLRM 328

Query: 534 DKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWY 593
           ++ T++ +++     G+LD+A     EMR     P    Y +L++ + K G + +A E  
Sbjct: 329 NEFTFTALIDGFCRNGFLDDALLAMKEMRECRIQPSVVCYNVLINGYCKLGRMDEARELI 388

Query: 594 EAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEA 653
             M   G++P+V T +++LS + ++G    A+ L + ML  G+ P   TY+ L+    E 
Sbjct: 389 HEMEAKGMKPDVVTYSTILSGYCKIGDTDSAFELNRKMLKKGVVPDAITYSSLIRGLCEE 448

Query: 654 RSPYDMGFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRESKRGLV 713
           R   D     E M   G     F  +      DG     +V   L +    D   K+G++
Sbjct: 449 RRLGDACELFEKMLQLGLQPDEFTYTTL---IDGHCKEGNVQKALSL---HDEMIKKGVL 502

Query: 714 DAVV------DFLHKSGLKEEAGSVWEVAAQKNVYPDAVKEKGMSY 753
             VV      D L KS   +EA  +      ++  PD +K + + +
Sbjct: 503 PDVVTYSVLIDGLSKSARTKEAQRLLFKLYYEDPVPDNIKYEALMH 548



 Score =  145 bits (366), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 95/308 (30%), Positives = 152/308 (49%), Gaps = 1/308 (0%)

Query: 346 FFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSY 405
            F+ + R+ G   D  +Y T+V    +A        +  +M + G  P+VVT+  LIH+ 
Sbjct: 247 MFDEMARE-GLTPDGVSYNTLVSGYCKAGCLHEALAVFAEMAQKGVVPDVVTFTSLIHAM 305

Query: 406 GRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDT 465
            RA  L  A+ +  QM+  G   +  T+  LID   + GFLD A+   K+M+   + P  
Sbjct: 306 CRAGNLERAVALVGQMRERGLRMNEFTFTALIDGFCRNGFLDDALLAMKEMRECRIQPSV 365

Query: 466 FTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRD 525
             Y+V+IN   K G +  A +L  EM  +G  P++VTY+ +++   K  +  SA +L R 
Sbjct: 366 VCYNVLINGYCKLGRMDEARELIHEMEAKGMKPDVVTYSTILSGYCKIGDTDSAFELNRK 425

Query: 526 MQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGN 585
           M   G  PD +TYS ++  L     L +A  +F +M +    PDE  Y  L+D   K GN
Sbjct: 426 MLKKGVVPDAITYSSLIRGLCEERRLGDACELFEKMLQLGLQPDEFTYTTLIDGHCKEGN 485

Query: 586 VRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTL 645
           V+KA   ++ M++ G+ P+V T + L+    +  +  +A  LL  +      P    Y  
Sbjct: 486 VQKALSLHDEMIKKGVLPDVVTYSVLIDGLSKSARTKEAQRLLFKLYYEDPVPDNIKYEA 545

Query: 646 LLSCCTEA 653
           L+ CC  A
Sbjct: 546 LMHCCRTA 553



 Score =  139 bits (351), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 92/332 (27%), Positives = 152/332 (45%), Gaps = 50/332 (15%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           R+ G + +E T+T ++    R          + +M     QP+VV YN LI+ Y +   +
Sbjct: 322 RERGLRMNEFTFTALIDGFCRNGFLDDALLAMKEMRECRIQPSVVCYNVLINGYCKLGRM 381

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
           +EA ++  +M+  G +PD VTY T++  + K G  D A ++ +KM   G+ PD  TYS +
Sbjct: 382 DEARELIHEMEAKGMKPDVVTYSTILSGYCKIGDTDSAFELNRKMLKKGVVPDAITYSSL 441

Query: 472 INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF 531
           I  L +   L  A +LF +M+  G  P+  TY  +I    K  N Q AL L+ +M   G 
Sbjct: 442 IRGLCEERRLGDACELFEKMLQLGLQPDEFTYTTLIDGHCKEGNVQKALSLHDEMIKKGV 501

Query: 532 EPDKVTYSIVM-------------------------------EVLGHC------------ 548
            PD VTYS+++                               E L HC            
Sbjct: 502 LPDVVTYSVLIDGLSKSARTKEAQRLLFKLYYEDPVPDNIKYEALMHCCRTAEFKSVVAL 561

Query: 549 -------GYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGL 601
                  G +++A+ V+  M  ++W  D  VY +L+    + GN+ KA  +++ +L+ G 
Sbjct: 562 LKGFSMKGLMNQADKVYQSMLDRHWKLDGSVYSVLIHGHCRGGNIMKALSFHKQLLRCGF 621

Query: 602 RPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLN 633
            PN  +  SL+      G   +A +++Q +LN
Sbjct: 622 SPNSTSTISLVRGLFEEGMTVEADNVIQELLN 653



 Score = 86.7 bits (213), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 65/280 (23%), Positives = 116/280 (41%), Gaps = 50/280 (17%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           G K D  TY+T++    +     +  +L  +M++ G  P+ +TY+ LI        L +A
Sbjct: 395 GMKPDVVTYSTILSGYCKIGDTDSAFELNRKMLKKGVVPDAITYSSLIRGLCEERRLGDA 454

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
            ++F++M  +G +PD  TY TLID H K G +  A+ ++ +M   G+ PD  TYSV+I+ 
Sbjct: 455 CELFEKMLQLGLQPDEFTYTTLIDGHCKEGNVQKALSLHDEMIKKGVLPDVVTYSVLIDG 514

Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPNLV--------------------------------- 501
           L K+   + A +L  ++  +  +P+ +                                 
Sbjct: 515 LSKSARTKEAQRLLFKLYYEDPVPDNIKYEALMHCCRTAEFKSVVALLKGFSMKGLMNQA 574

Query: 502 -----------------TYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEV 544
                             Y+++I    +  N   AL  ++ +   GF P+  +   ++  
Sbjct: 575 DKVYQSMLDRHWKLDGSVYSVLIHGHCRGGNIMKALSFHKQLLRCGFSPNSTSTISLVRG 634

Query: 545 LGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAG 584
           L   G   EA+ V  E+     + D      L+DL  K G
Sbjct: 635 LFEEGMTVEADNVIQELLNCCSLADAETSKALIDLNRKEG 674


>gi|359479250|ref|XP_002275790.2| PREDICTED: pentatricopeptide repeat-containing protein
           At5g01110-like [Vitis vinifera]
          Length = 746

 Score =  159 bits (401), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 127/481 (26%), Positives = 215/481 (44%), Gaps = 80/481 (16%)

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
           ++G + + +T   M+  L + ++       L  M   G  P+VVTYN LI++Y R   L 
Sbjct: 247 RSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGLLE 306

Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
           EA ++   M   G +P   TY  +I+   K G    A  +  +M   G+SPDT TY++++
Sbjct: 307 EAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILL 366

Query: 473 NCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFE 532
               +  ++  A ++F EM +QG +P+LV+++ +I L +K      ALK +RDM+NAG  
Sbjct: 367 VECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLA 426

Query: 533 PDKVTYSI--------------------------VMEVL-------GHC--GYLDEAEAV 557
           PD V Y+I                          V++V+       G C    L EA+ +
Sbjct: 427 PDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGLCKEKMLSEADEL 486

Query: 558 FAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLR 617
           F EM  +   PD   +  L++ + K GN+ KA   +E M+Q  L+P+V T N+L+  F +
Sbjct: 487 FTEMTERGVFPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCK 546

Query: 618 VGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS------CCTEARSPYD------------- 658
             ++     L   M++  + P+  +Y +L++      C +EA   +D             
Sbjct: 547 GSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIIT 606

Query: 659 -----MGFCHELMAVSGHPAHMFLLSMPSPG--PDGQNVRDHVGSFLEMMHSE------D 705
                 G+C    AV    A  FL +M   G  PDG      +  F++  + +      +
Sbjct: 607 CNTIVKGYCRAGNAVK---ADEFLSNMLLKGIVPDGITYNTLINGFIKEENMDRAFALVN 663

Query: 706 RESKRGLVDAVVDF------LHKSGLKEEAGSVWEVAAQKNVYPDAVKEKGMSYWLINLH 759
           +    GL+  V+ +        + G  +EA  +     ++ V PD    +     LIN H
Sbjct: 664 KMENSGLLPDVITYNVILNGFSRQGRMQEAELIMLKMIERGVNPD----RSTYTSLINGH 719

Query: 760 V 760
           V
Sbjct: 720 V 720



 Score =  151 bits (381), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 90/308 (29%), Positives = 163/308 (52%), Gaps = 5/308 (1%)

Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLI 402
           AL +F  ++  AG   D   YT ++G   R        K+ D+M+  GC  +VVTYN ++
Sbjct: 413 ALKYFRDMK-NAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYNTIL 471

Query: 403 HSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLS 462
           +   +   L+EA ++F +M   G  PD  T+ TLI+ ++K G ++ A+ +++ M    L 
Sbjct: 472 NGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQRNLK 531

Query: 463 PDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKL 522
           PD  TY+ +I+   K   ++  ++L+ +M+++   PN ++Y I+I           A +L
Sbjct: 532 PDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRL 591

Query: 523 YRDMQNAGFEPDKVTYSIVMEVLGHC--GYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLW 580
           + +M   GFE   +T + +++  G+C  G   +A+   + M  K  VPD   Y  L++ +
Sbjct: 592 WDEMVEKGFEATIITCNTIVK--GYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLINGF 649

Query: 581 GKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSL 640
            K  N+ +A+     M  +GL P+V T N +L+ F R G++ +A  ++  M+  G+ P  
Sbjct: 650 IKEENMDRAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQEAELIMLKMIERGVNPDR 709

Query: 641 QTYTLLLS 648
            TYT L++
Sbjct: 710 STYTSLIN 717



 Score =  122 bits (306), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 125/571 (21%), Positives = 221/571 (38%), Gaps = 87/571 (15%)

Query: 303 RILRQWKWGPLAEEALGNTNYSMDAYQANQVLKQLQDHTVALG--FFNWLRRQA-GFKHD 359
           ++L   K G L   +L N  + +D+     VL + +++ + LG  F + +      FKH 
Sbjct: 75  KVLLNLKQGKL--NSLRNLLFRLDSVVVVDVLYKCREN-LQLGQRFIDSITSNCPNFKHS 131

Query: 360 EHTYTTMVGILGRARQFGAINKLLDQMVRD-----------------GCQPNVVTYNRLI 402
             +++ M+ IL R+R+      ++ +MVR                   C  N + ++ L+
Sbjct: 132 LQSFSAMIHILVRSRRLPDAQAVILRMVRKSGVSRVEIVESLVLTYGNCGSNPLVFDLLV 191

Query: 403 HSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKK------- 455
            +Y +A  L E  + F+ ++  G         +L+    K G++D+A ++Y++       
Sbjct: 192 RTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWVDLAWEIYQEVVRSGVQ 251

Query: 456 ----------------------------MQAAGLSPDTFTYSVIINCLGKAGHLQAAHQL 487
                                       M+  G+ PD  TY+ +IN   + G L+ A +L
Sbjct: 252 VNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGLLEEAFEL 311

Query: 488 FCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGH 547
              M  +G  P + TYN +I    K   Y  A  +  +M   G  PD  TY+I++     
Sbjct: 312 MDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILLVECCR 371

Query: 548 CGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPT 607
              + +AE +F EM  +  VPD   +  L+ L  K G + +A +++  M  AGL P+   
Sbjct: 372 NDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVI 431

Query: 608 CNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS--CCTEARSPYDMGFCHEL 665
              L+  F R G +S+A  +   ML  G    + TY  +L+  C  +  S  D  F    
Sbjct: 432 YTILIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGLCKEKMLSEADELFTE-- 489

Query: 666 MAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRESKRGLVDAVVDFLHKSGL 725
           M   G     +  +    G       +   +  EMM   + +      + ++D   K   
Sbjct: 490 MTERGVFPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSE 549

Query: 726 KEEAGSVWEVAAQKNVYP-------------------------DAVKEKGMSYWLINLHV 760
            E+   +W     + +YP                         D + EKG    +I  + 
Sbjct: 550 MEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNT 609

Query: 761 MSDGTAVIALSRTLAWFRKQMLISGVGPSRI 791
           +  G      +     F   ML+ G+ P  I
Sbjct: 610 IVKGYCRAGNAVKADEFLSNMLLKGIVPDGI 640



 Score =  116 bits (290), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 63/252 (25%), Positives = 122/252 (48%)

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
           + G   D +T+TT++    +         L + M++   +P+VVTYN LI  + + + + 
Sbjct: 492 ERGVFPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEME 551

Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
           +  +++  M      P+ ++Y  LI+ +   G +  A  ++ +M   G      T + I+
Sbjct: 552 KVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIV 611

Query: 473 NCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFE 532
               +AG+   A +    M+ +G +P+ +TYN +I    K  N   A  L   M+N+G  
Sbjct: 612 KGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLINGFIKEENMDRAFALVNKMENSGLL 671

Query: 533 PDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEW 592
           PD +TY++++      G + EAE +  +M  +   PD   Y  L++      N+++A+  
Sbjct: 672 PDVITYNVILNGFSRQGRMQEAELIMLKMIERGVNPDRSTYTSLINGHVTQNNLKEAFRV 731

Query: 593 YEAMLQAGLRPN 604
           ++ MLQ G  P+
Sbjct: 732 HDEMLQRGFVPD 743


>gi|302818914|ref|XP_002991129.1| hypothetical protein SELMODRAFT_236212 [Selaginella moellendorffii]
 gi|300141060|gb|EFJ07775.1| hypothetical protein SELMODRAFT_236212 [Selaginella moellendorffii]
          Length = 614

 Score =  159 bits (401), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 106/368 (28%), Positives = 176/368 (47%), Gaps = 42/368 (11%)

Query: 354 AGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNE 413
           +G   D   YT ++  L + ++      +L +M   GC+PNVVTYN LI    + N  + 
Sbjct: 73  SGIVADTVIYTALLSGLWKEKRLDQALAILHEMRDHGCEPNVVTYNSLIDGLCKNNEPDR 132

Query: 414 ALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKM----------------- 456
           A ++F+ M+ V C P  VTY TL+D   + G L+ AM ++++M                 
Sbjct: 133 AQELFEHMKSVECSPSMVTYNTLLDGLFRTGKLERAMALFQEMLDRRSHDMDDRCSPNVI 192

Query: 457 -------------------------QAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEM 491
                                    +A G SPD  TY+++++ L K   + AA ++  EM
Sbjct: 193 TYSVLIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAAWEVLREM 252

Query: 492 VNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYL 551
           ++ GC+PNLVTYN ++    +AR    AL L RDM   G  P+ VTY  +++ L   G +
Sbjct: 253 LDAGCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGRV 312

Query: 552 DEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSL 611
            +A A+ A+M  K   PD  +Y +L++   KA  V ++       +  G++P+V T +S+
Sbjct: 313 KDACAMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGGIKPDVVTYSSV 372

Query: 612 LSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGFCHELMAVSGH 671
           +    R  +L +A  LL  + + G  P +  Y+ L+    +A    +    +E+MA  G 
Sbjct: 373 IYGLCRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDLYEVMAGDGC 432

Query: 672 PAHMFLLS 679
            A +   S
Sbjct: 433 DADVVTYS 440



 Score =  156 bits (394), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 88/286 (30%), Positives = 153/286 (53%)

Query: 362 TYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQM 421
           TY+ ++  L +A +     +LL+ M   GC P+V+TY  L+    + + +  A +V ++M
Sbjct: 193 TYSVLIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAAWEVLREM 252

Query: 422 QVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHL 481
              GC P+ VTY +L+    +A  +  A+ + + M   G +P+  TY  +I+ L K G +
Sbjct: 253 LDAGCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGRV 312

Query: 482 QAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIV 541
           + A  +  +M+++G  P+L+ YN++I    KA     ++ L R   + G +PD VTYS V
Sbjct: 313 KDACAMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGGIKPDVVTYSSV 372

Query: 542 MEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGL 601
           +  L     LDEA  +   ++ +   PD  +Y  L+D   KAG V +A++ YE M   G 
Sbjct: 373 IYGLCRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDLYEVMAGDGC 432

Query: 602 RPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
             +V T ++L+    + G++ +A+ LL  M+ +G  PS  TY  L+
Sbjct: 433 DADVVTYSTLIDGLCKAGRVDEAHLLLARMVRMGTPPSTMTYNSLI 478



 Score =  147 bits (370), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 95/293 (32%), Positives = 147/293 (50%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           G   D  TYT +V  L +  +  A  ++L +M+  GC PN+VTYN L+H   RA  +++A
Sbjct: 221 GCSPDVITYTILVDGLCKESKVAAAWEVLREMLDAGCVPNLVTYNSLLHGLCRARRVSDA 280

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
           L + + M   GC P+ VTY TLID   K G +  A  M   M   G +PD   Y+++IN 
Sbjct: 281 LALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVKDACAMLADMIDKGGTPDLMIYNMLING 340

Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPD 534
           L KA  +  +  L    V+ G  P++VTY+ +I    ++     A +L   +++ G  PD
Sbjct: 341 LCKADQVDESIALLRRAVSGGIKPDVVTYSSVIYGLCRSNRLDEACRLLLYVKSRGCPPD 400

Query: 535 KVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYE 594
            + YS +++ L   G +DEA  ++  M       D   Y  L+D   KAG V +A     
Sbjct: 401 VILYSTLIDGLCKAGKVDEAFDLYEVMAGDGCDADVVTYSTLIDGLCKAGRVDEAHLLLA 460

Query: 595 AMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
            M++ G  P+  T NSL+     +  L +A  L++ M      PS  TY +L+
Sbjct: 461 RMVRMGTPPSTMTYNSLIKGLCDLNHLDEAIELVEEMERSNCAPSAVTYNILI 513



 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 94/290 (32%), Positives = 144/290 (49%), Gaps = 8/290 (2%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           G   D   Y  ++  L +A Q      LL + V  G +P+VVTY+ +I+   R+N L+EA
Sbjct: 326 GGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGGIKPDVVTYSSVIYGLCRSNRLDEA 385

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
             +   ++  GC PD + Y TLID   KAG +D A D+Y+ M   G   D  TYS +I+ 
Sbjct: 386 CRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDLYEVMAGDGCDADVVTYSTLIDG 445

Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPD 534
           L KAG +  AH L   MV  G  P+ +TYN +I       +   A++L  +M+ +   P 
Sbjct: 446 LCKAGRVDEAHLLLARMVRMGTPPSTMTYNSLIKGLCDLNHLDEAIELVEEMERSNCAPS 505

Query: 535 KVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVP------DEPVYGLLVDLWGKAGNVRK 588
            VTY+I++  +     +D A  V  E  +   V       D   Y  L+D   KAG V +
Sbjct: 506 AVTYNILIHGMCRMERVDSA-VVLLEQAKARCVAAGGTALDTIAYSSLIDGLCKAGRVAE 564

Query: 589 AWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHL-LQGMLNLGLK 637
           A ++++ M+  G+ P+  T + LL    +   L +  HL L  M+ LG +
Sbjct: 565 ALDYFQEMIDNGVIPDHITYSILLEGLKKSKDLHELRHLVLDQMVQLGYR 614



 Score =  129 bits (325), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 93/326 (28%), Positives = 148/326 (45%), Gaps = 8/326 (2%)

Query: 359 DEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVF 418
           D +TY  ++    R  +     +  D+M      PNV   + LI    +A    +AL  F
Sbjct: 8   DVYTYAALLRGFCRGGEIDQAQRCFDEMRSKNLVPNVFLCSILIDGLCKAKRSIDALRCF 67

Query: 419 KQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKA 478
           + MQ  G   D V Y  L+    K   LD A+ +  +M+  G  P+  TY+ +I+ L K 
Sbjct: 68  RAMQGSGIVADTVIYTALLSGLWKEKRLDQALAILHEMRDHGCEPNVVTYNSLIDGLCKN 127

Query: 479 GHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDM-------QNAGF 531
                A +LF  M +  C P++VTYN ++    +    + A+ L+++M        +   
Sbjct: 128 NEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGKLERAMALFQEMLDRRSHDMDDRC 187

Query: 532 EPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWE 591
            P+ +TYS++++ L     + +A  +   M+ +   PD   Y +LVD   K   V  AWE
Sbjct: 188 SPNVITYSVLIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAAWE 247

Query: 592 WYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTY-TLLLSCC 650
               ML AG  PN+ T NSLL    R  ++SDA  L++ M   G  P++ TY TL+   C
Sbjct: 248 VLREMLDAGCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLC 307

Query: 651 TEARSPYDMGFCHELMAVSGHPAHMF 676
              R         +++   G P  M 
Sbjct: 308 KVGRVKDACAMLADMIDKGGTPDLMI 333



 Score =  126 bits (316), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 87/275 (31%), Positives = 137/275 (49%), Gaps = 7/275 (2%)

Query: 391 CQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAM 450
           CQP+V TY  L+  + R   +++A   F +M+     P+      LID   KA     A+
Sbjct: 5   CQPDVYTYAALLRGFCRGGEIDQAQRCFDEMRSKNLVPNVFLCSILIDGLCKAKRSIDAL 64

Query: 451 DMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQ 510
             ++ MQ +G+  DT  Y+ +++ L K   L  A  +  EM + GC PN+VTYN +I   
Sbjct: 65  RCFRAMQGSGIVADTVIYTALLSGLWKEKRLDQALAILHEMRDHGCEPNVVTYNSLIDGL 124

Query: 511 AKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEM--RRKNWV- 567
            K      A +L+  M++    P  VTY+ +++ L   G L+ A A+F EM  RR + + 
Sbjct: 125 CKNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGKLERAMALFQEMLDRRSHDMD 184

Query: 568 ----PDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSD 623
               P+   Y +L+D   KA  V +A E  E+M   G  P+V T   L+    +  +++ 
Sbjct: 185 DRCSPNVITYSVLIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAA 244

Query: 624 AYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYD 658
           A+ +L+ ML+ G  P+L TY  LL     AR   D
Sbjct: 245 AWEVLREMLDAGCVPNLVTYNSLLHGLCRARRVSD 279



 Score =  124 bits (312), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 91/282 (32%), Positives = 139/282 (49%), Gaps = 18/282 (6%)

Query: 329 QANQVLKQLQDHTVALGFFNWLRR--QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQM 386
           +A+QV     D ++AL     LRR    G K D  TY++++  L R+ +     +LL  +
Sbjct: 343 KADQV-----DESIAL-----LRRAVSGGIKPDVVTYSSVIYGLCRSNRLDEACRLLLYV 392

Query: 387 VRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFL 446
              GC P+V+ Y+ LI    +A  ++EA D+++ M   GC+ D VTY TLID   KAG +
Sbjct: 393 KSRGCPPDVILYSTLIDGLCKAGKVDEAFDLYEVMAGDGCDADVVTYSTLIDGLCKAGRV 452

Query: 447 DVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIM 506
           D A  +  +M   G  P T TY+ +I  L    HL  A +L  EM    C P+ VTYNI+
Sbjct: 453 DEAHLLLARMVRMGTPPSTMTYNSLIKGLCDLNHLDEAIELVEEMERSNCAPSAVTYNIL 512

Query: 507 IALQAKARNYQSALKLY-----RDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEM 561
           I    +     SA+ L      R +   G   D + YS +++ L   G + EA   F EM
Sbjct: 513 IHGMCRMERVDSAVVLLEQAKARCVAAGGTALDTIAYSSLIDGLCKAGRVAEALDYFQEM 572

Query: 562 RRKNWVPDEPVYGLLVDLWGKAGNVRKAWEW-YEAMLQAGLR 602
                +PD   Y +L++   K+ ++ +      + M+Q G R
Sbjct: 573 IDNGVIPDHITYSILLEGLKKSKDLHELRHLVLDQMVQLGYR 614



 Score =  123 bits (308), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 82/277 (29%), Positives = 132/277 (47%)

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
            AG   +  TY +++  L RAR+      L+  M   GC PNVVTY  LI    +   + 
Sbjct: 254 DAGCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVK 313

Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
           +A  +   M   G  PD + Y  LI+   KA  +D ++ + ++  + G+ PD  TYS +I
Sbjct: 314 DACAMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGGIKPDVVTYSSVI 373

Query: 473 NCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFE 532
             L ++  L  A +L   + ++GC P+++ Y+ +I    KA     A  LY  M   G +
Sbjct: 374 YGLCRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDLYEVMAGDGCD 433

Query: 533 PDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEW 592
            D VTYS +++ L   G +DEA  + A M R    P    Y  L+       ++ +A E 
Sbjct: 434 ADVVTYSTLIDGLCKAGRVDEAHLLLARMVRMGTPPSTMTYNSLIKGLCDLNHLDEAIEL 493

Query: 593 YEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQ 629
            E M ++   P+  T N L+    R+ ++  A  LL+
Sbjct: 494 VEEMERSNCAPSAVTYNILIHGMCRMERVDSAVVLLE 530


>gi|414883768|tpg|DAA59782.1| TPA: hypothetical protein ZEAMMB73_461975 [Zea mays]
          Length = 683

 Score =  159 bits (401), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 92/294 (31%), Positives = 158/294 (53%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           G   D HTY+ ++  L +  +FG+  ++LD+M   GC PN+VTY+ L+HS+ R    ++A
Sbjct: 343 GCPPDVHTYSILMHGLCKLGRFGSAVRMLDEMEEKGCAPNIVTYSTLLHSFCRNGMWDDA 402

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
             +  QM   G   +   Y  +I    K G LD A  + ++M++ G  PD  TY+ +I  
Sbjct: 403 RAMLDQMLAKGFSMNSQGYNGIIYALCKDGKLDQATRLVQEMKSQGCKPDICTYNTMIYH 462

Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPD 534
           L     ++ A  +F  ++ +G + N +TYN +I    +   +Q  L+L  +M   G + D
Sbjct: 463 LCNNDLMEEAEHIFRNLIEEGVVANGITYNTLIHALLRNGRWQEGLRLASEMLLHGCQLD 522

Query: 535 KVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYE 594
            ++Y+ +++ L   G +D + A+  EM  K   P+   Y +L++   KAG VR A E  +
Sbjct: 523 VISYNGLIKALCKEGNVDRSMALLEEMVTKGIKPNNFSYNMLINELCKAGKVRDALELSK 582

Query: 595 AMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
            ML  GL P++ T N+L++   +VG    A +LL+ + N  + P + TY +L+S
Sbjct: 583 EMLNQGLTPDIVTYNTLINGLCKVGWTHAALNLLEKLPNENVHPDIVTYNILIS 636



 Score =  124 bits (312), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 107/424 (25%), Positives = 190/424 (44%), Gaps = 24/424 (5%)

Query: 355 GFKHDEHTYTTMV-GI--LGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           G   D +T+  +V G+  LGR R+     +L+D+M+  GC P+VVTY  L+    R    
Sbjct: 242 GCAADVNTFNDLVLGLCGLGRVREAA---RLVDRMMTQGCMPSVVTYGFLLQGLCRTRQA 298

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
           +EA  +  ++     E + V   T+I      G L  A ++Y+ M + G  PD  TYS++
Sbjct: 299 DEACAMLGRLP----EVNVVMLNTVIRGCLTEGKLARATELYEMMGSKGCPPDVHTYSIL 354

Query: 472 INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF 531
           ++ L K G   +A ++  EM  +GC PN+VTY+ ++    +   +  A  +   M   GF
Sbjct: 355 MHGLCKLGRFGSAVRMLDEMEEKGCAPNIVTYSTLLHSFCRNGMWDDARAMLDQMLAKGF 414

Query: 532 EPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWE 591
             +   Y+ ++  L   G LD+A  +  EM+ +   PD   Y  ++        + +A  
Sbjct: 415 SMNSQGYNGIIYALCKDGKLDQATRLVQEMKSQGCKPDICTYNTMIYHLCNNDLMEEAEH 474

Query: 592 WYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYT-LLLSCC 650
            +  +++ G+  N  T N+L+ A LR G+  +   L   ML  G +  + +Y  L+ + C
Sbjct: 475 IFRNLIEEGVVANGITYNTLIHALLRNGRWQEGLRLASEMLLHGCQLDVISYNGLIKALC 534

Query: 651 TEARSPYDMGFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRESKR 710
            E      M    E++     P +     + +       VRD +    EM++       +
Sbjct: 535 KEGNVDRSMALLEEMVTKGIKPNNFSYNMLINELCKAGKVRDALELSKEMLN-------Q 587

Query: 711 GLVDAVVDF------LHKSGLKEEAGSVWEVAAQKNVYPDAVKEKGMSYWLINLHVMSDG 764
           GL   +V +      L K G    A ++ E    +NV+PD V    +  W   + ++ D 
Sbjct: 588 GLTPDIVTYNTLINGLCKVGWTHAALNLLEKLPNENVHPDIVTYNILISWHCKVRLLDDA 647

Query: 765 TAVI 768
             ++
Sbjct: 648 AMLL 651



 Score =  115 bits (287), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 74/260 (28%), Positives = 123/260 (47%), Gaps = 39/260 (15%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNV------------------- 395
           GF  +   Y  ++  L +  +     +L+ +M   GC+P++                   
Sbjct: 413 GFSMNSQGYNGIIYALCKDGKLDQATRLVQEMKSQGCKPDICTYNTMIYHLCNNDLMEEA 472

Query: 396 ----------------VTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDI 439
                           +TYN LIH+  R     E L +  +M + GC+ D ++Y  LI  
Sbjct: 473 EHIFRNLIEEGVVANGITYNTLIHALLRNGRWQEGLRLASEMLLHGCQLDVISYNGLIKA 532

Query: 440 HAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPN 499
             K G +D +M + ++M   G+ P+ F+Y+++IN L KAG ++ A +L  EM+NQG  P+
Sbjct: 533 LCKEGNVDRSMALLEEMVTKGIKPNNFSYNMLINELCKAGKVRDALELSKEMLNQGLTPD 592

Query: 500 LVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCG--YLDEAEAV 557
           +VTYN +I    K     +AL L   + N    PD VTY+I++    HC    LD+A  +
Sbjct: 593 IVTYNTLINGLCKVGWTHAALNLLEKLPNENVHPDIVTYNILIS--WHCKVRLLDDAAML 650

Query: 558 FAEMRRKNWVPDEPVYGLLV 577
             +      VP+E  +G++V
Sbjct: 651 LDKAISGGIVPNERTWGMMV 670



 Score =  103 bits (257), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 89/339 (26%), Positives = 140/339 (41%), Gaps = 37/339 (10%)

Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLI 402
           AL   + + R+        +Y  ++  L RA        L  +M+RD   P   T+    
Sbjct: 125 ALHLLDQMPRRFAVSPSFRSYNVVLSTLARADCHADALLLYRRMLRDRVPPTTFTFGVAA 184

Query: 403 HSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLID-IHAKAGFLDVAMDMYKKMQAAGL 461
            +  R     +AL + + M   GC PD V Y T+I  + A+ G  + AM +  +M   G 
Sbjct: 185 RALCRLGRAGDALALLRGMARHGCVPDAVLYQTVIHALVAQGGVAEAAM-LLDEMLLMGC 243

Query: 462 SPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQS--- 518
           + D  T++ ++  L   G ++ A +L   M+ QGC+P++VTY  +  LQ   R  Q+   
Sbjct: 244 AADVNTFNDLVLGLCGLGRVREAARLVDRMMTQGCMPSVVTYGFL--LQGLCRTRQADEA 301

Query: 519 ------------------------------ALKLYRDMQNAGFEPDKVTYSIVMEVLGHC 548
                                         A +LY  M + G  PD  TYSI+M  L   
Sbjct: 302 CAMLGRLPEVNVVMLNTVIRGCLTEGKLARATELYEMMGSKGCPPDVHTYSILMHGLCKL 361

Query: 549 GYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTC 608
           G    A  +  EM  K   P+   Y  L+  + + G    A    + ML  G   N    
Sbjct: 362 GRFGSAVRMLDEMEEKGCAPNIVTYSTLLHSFCRNGMWDDARAMLDQMLAKGFSMNSQGY 421

Query: 609 NSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
           N ++ A  + G+L  A  L+Q M + G KP + TY  ++
Sbjct: 422 NGIIYALCKDGKLDQATRLVQEMKSQGCKPDICTYNTMI 460


>gi|224088126|ref|XP_002308333.1| predicted protein [Populus trichocarpa]
 gi|222854309|gb|EEE91856.1| predicted protein [Populus trichocarpa]
          Length = 1048

 Score =  159 bits (401), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 93/342 (27%), Positives = 173/342 (50%), Gaps = 2/342 (0%)

Query: 297 VVESVSRILRQWKWGPLAEEALGNTNYSMDAYQANQVLKQ-LQDHTVALGFFNWLRRQAG 355
           VV  ++ I+R        EE L    + ++     +VLK+  +   +A  FFNW++ + G
Sbjct: 140 VVHEITGIVRAENCTASMEERLDKVGFQLEPEIVEKVLKRCYKVPHLAYRFFNWVKTKDG 199

Query: 356 FKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEAL 415
           F H   TY TM+   G AR+F  ++ LL++M +  C+ ++ T+  LI  YG+A  + +AL
Sbjct: 200 FCHTTKTYNTMLYTAGEAREFSVVDVLLEEMEKYSCERDIKTWTILIQQYGKAKLVGKAL 259

Query: 416 DVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCL 475
            V ++M+  GCEPD   Y   +     AG  ++A+++YK+M    + P+   Y +++NCL
Sbjct: 260 LVHEKMRKSGCEPDVEVYEVTLHSLCDAGKGEIALEIYKEMVQREMEPNLSLYKMLLNCL 319

Query: 476 GKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDK 535
            K+G + A   +  +M+    IP    +  ++     A   + AL+L RD++N   + D 
Sbjct: 320 AKSGDVSAVQSVADDMIRVSQIPEHDVHVCVLKSYCVAGRIREALELIRDLKNKEIQLDY 379

Query: 536 VTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEA 595
                +++ L     + +A  +   M+RK++V D  VYG++++ + +   + KA + +++
Sbjct: 380 EVSETLVKGLSRANRIADALEIVEIMKRKDFV-DGKVYGIIINGYLRRNELSKALDLFQS 438

Query: 596 MLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLK 637
           M + G  P   T   L+    R  +      L   ML  G++
Sbjct: 439 MKEFGHLPTTSTYTELMQHLFRSNEYQKCCELYDEMLERGVE 480



 Score =  127 bits (318), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 97/374 (25%), Positives = 166/374 (44%), Gaps = 8/374 (2%)

Query: 284 LAPFSRHFASTGNVVESVSRILRQWKWGPLAEEALGNTNYSMDAYQANQVLKQLQDH-TV 342
           + P S+ +      ++ V RIL   +  P+ ++AL             + L+    H   
Sbjct: 621 VKPLSKAYDEQD--LQEVLRILSSLEDWPIIQDALEKCTIQFTPELVAETLRNCGMHGNA 678

Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLI 402
           AL FF W+ +Q GF     TY   + + GR + F  +  L  +M R G      T+  +I
Sbjct: 679 ALHFFAWVGKQNGFCQTTETYNMAMKVSGRGKDFKHMRSLFYEMRRRGFLIPPDTWAIMI 738

Query: 403 HSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHA--KAGFLDVAMDMYKKMQAAG 460
             YGR      AL +F +M+  GC P+  TY  LI      K   +D A+ ++++M  AG
Sbjct: 739 MQYGRTGLTEIALKIFGEMKASGCNPNDSTYKYLIIFLCGRKGRKVDEAIKIFREMIRAG 798

Query: 461 LSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQG-CIPNLVTYNIMIALQAKARNYQSA 519
             PD       + CL + G L  A +    +   G  +P   +Y++ I    +A   + A
Sbjct: 799 HVPDKELVGTYLCCLCEVGKLLEARKSVDSLCKAGFTVP--ASYSLYIRALCRAGMLEEA 856

Query: 520 LKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDL 579
           L L   +       D+ T++ ++  L   G L+EA A    M++    P   VY  L+  
Sbjct: 857 LSLVDQVSTEKTTLDRYTHASLVHGLLQKGRLEEALAKVDSMKQVGINPTVHVYTSLIVH 916

Query: 580 WGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPS 639
           + +     KA E +E+M Q G  P + T ++L+  ++    + +A+++   +   G  P 
Sbjct: 917 FFREKLASKALEIFESMKQEGCEPTIVTYSALIRGYMDTENVIEAWNVFHSLKTKGPAPD 976

Query: 640 LQTYTLLLSCCTEA 653
            +TY++ LSC   A
Sbjct: 977 FKTYSMFLSCLCRA 990



 Score = 85.5 bits (210), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 51/151 (33%), Positives = 85/151 (56%), Gaps = 12/151 (7%)

Query: 359  DEHTYTTMV-GILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDV 417
            D +T+ ++V G+L + R   A+ K+ D M + G  P V  Y  LI  + R    ++AL++
Sbjct: 871  DRYTHASLVHGLLQKGRLEEALAKV-DSMKQVGINPTVHVYTSLIVHFFREKLASKALEI 929

Query: 418  FKQMQVVGCEPDRVTYCTLIDIHAKAGFLDV-----AMDMYKKMQAAGLSPDTFTYSVII 472
            F+ M+  GCEP  VTY  LI      G++D      A +++  ++  G +PD  TYS+ +
Sbjct: 930  FESMKQEGCEPTIVTYSALI-----RGYMDTENVIEAWNVFHSLKTKGPAPDFKTYSMFL 984

Query: 473  NCLGKAGHLQAAHQLFCEMVNQGCIPNLVTY 503
            +CL +AG  + A QL  +MV+ G +P+ V +
Sbjct: 985  SCLCRAGKSEEALQLLSDMVDNGIVPSNVNF 1015



 Score = 72.4 bits (176), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 57/226 (25%), Positives = 98/226 (43%), Gaps = 2/226 (0%)

Query: 343  ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLI 402
            A+  F  + R AG   D+    T +  L    +     K +D + + G      +Y+  I
Sbjct: 787  AIKIFREMIR-AGHVPDKELVGTYLCCLCEVGKLLEARKSVDSLCKAGFTVPA-SYSLYI 844

Query: 403  HSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLS 462
             +  RA  L EAL +  Q+       DR T+ +L+    + G L+ A+     M+  G++
Sbjct: 845  RALCRAGMLEEALSLVDQVSTEKTTLDRYTHASLVHGLLQKGRLEEALAKVDSMKQVGIN 904

Query: 463  PDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKL 522
            P    Y+ +I    +      A ++F  M  +GC P +VTY+ +I       N   A  +
Sbjct: 905  PTVHVYTSLIVHFFREKLASKALEIFESMKQEGCEPTIVTYSALIRGYMDTENVIEAWNV 964

Query: 523  YRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVP 568
            +  ++  G  PD  TYS+ +  L   G  +EA  + ++M     VP
Sbjct: 965  FHSLKTKGPAPDFKTYSMFLSCLCRAGKSEEALQLLSDMVDNGIVP 1010



 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 51/205 (24%), Positives = 88/205 (42%), Gaps = 4/205 (1%)

Query: 362  TYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQM 421
            +Y+  +  L RA        L+DQ+  +    +  T+  L+H   +   L EAL     M
Sbjct: 839  SYSLYIRALCRAGMLEEALSLVDQVSTEKTTLDRYTHASLVHGLLQKGRLEEALAKVDSM 898

Query: 422  QVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHL 481
            + VG  P    Y +LI    +      A+++++ M+  G  P   TYS +I       ++
Sbjct: 899  KQVGINPTVHVYTSLIVHFFREKLASKALEIFESMKQEGCEPTIVTYSALIRGYMDTENV 958

Query: 482  QAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIV 541
              A  +F  +  +G  P+  TY++ ++   +A   + AL+L  DM + G  P  V +  V
Sbjct: 959  IEAWNVFHSLKTKGPAPDFKTYSMFLSCLCRAGKSEEALQLLSDMVDNGIVPSNVNFRTV 1018

Query: 542  MEVLGHCGYLDEAEAVFAEMRRKNW 566
               L   G    A+ V     +K W
Sbjct: 1019 FFGLNREGKQSLAQTVL----QKKW 1039



 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 57/240 (23%), Positives = 114/240 (47%), Gaps = 14/240 (5%)

Query: 357 KHDEHTYTTMVGILGRARQFGAINKLLDQMVRD----GCQPNVVTYNRLIHSYGRANYLN 412
           +HD H     V +L      G I + L +++RD      Q +      L+    RAN + 
Sbjct: 343 EHDVH-----VCVLKSYCVAGRIREAL-ELIRDLKNKEIQLDYEVSETLVKGLSRANRIA 396

Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
           +AL++ + M+       +V Y  +I+ + +   L  A+D+++ M+  G  P T TY+ ++
Sbjct: 397 DALEIVEIMKRKDFVDGKV-YGIIINGYLRRNELSKALDLFQSMKEFGHLPTTSTYTELM 455

Query: 473 NCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFE 532
             L ++   Q   +L+ EM+ +G   + V    ++A   +  +   A +++  M++ G +
Sbjct: 456 QHLFRSNEYQKCCELYDEMLERGVEIDSVAVMAIVAGHVRQDHISEAWEVFETMEDKGIK 515

Query: 533 PDKVTYSIVMEVLGHCGYLDEAEAVFAEMR-RKNWVPDEPVYGLL--VDLWGKAGNVRKA 589
           P   +YSI ++ L      DE   V  +M+  K ++ DE    ++  ++  G+  N+RK 
Sbjct: 516 PTWKSYSIFIKELCKVLRTDEIIKVLGKMQASKMFICDEIFEWVISCMERKGEMDNIRKV 575



 Score = 58.5 bits (140), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 40/154 (25%), Positives = 68/154 (44%), Gaps = 1/154 (0%)

Query: 502 TYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEM 561
           TYN M+    +AR +     L  +M+    E D  T++I+++  G    + +A  V  +M
Sbjct: 206 TYNTMLYTAGEAREFSVVDVLLEEMEKYSCERDIKTWTILIQQYGKAKLVGKALLVHEKM 265

Query: 562 RRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQL 621
           R+    PD  VY + +     AG    A E Y+ M+Q  + PN+     LL+   + G +
Sbjct: 266 RKSGCEPDVEVYEVTLHSLCDAGKGEIALEIYKEMVQREMEPNLSLYKMLLNCLAKSGDV 325

Query: 622 SDAYHLLQGMLNLGLKPSLQTYTLLL-SCCTEAR 654
           S    +   M+ +   P    +  +L S C   R
Sbjct: 326 SAVQSVADDMIRVSQIPEHDVHVCVLKSYCVAGR 359



 Score = 49.7 bits (117), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 30/120 (25%), Positives = 55/120 (45%)

Query: 530 GFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKA 589
           GF     TY+ ++   G        + +  EM + +   D   + +L+  +GKA  V KA
Sbjct: 199 GFCHTTKTYNTMLYTAGEAREFSVVDVLLEEMEKYSCERDIKTWTILIQQYGKAKLVGKA 258

Query: 590 WEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSC 649
              +E M ++G  P+V      L +    G+   A  + + M+   ++P+L  Y +LL+C
Sbjct: 259 LLVHEKMRKSGCEPDVEVYEVTLHSLCDAGKGEIALEIYKEMVQREMEPNLSLYKMLLNC 318


>gi|224069551|ref|XP_002326371.1| predicted protein [Populus trichocarpa]
 gi|222833564|gb|EEE72041.1| predicted protein [Populus trichocarpa]
          Length = 726

 Score =  158 bits (400), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 92/312 (29%), Positives = 161/312 (51%), Gaps = 6/312 (1%)

Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLI 402
            +  FN +R ++  + + HTYT MV  + + R+     ++L++M+  G  P+VVTYN LI
Sbjct: 338 GMDLFNEMRERSC-EPNVHTYTVMVDAMCKERKLDESRRILNEMMEKGLVPSVVTYNALI 396

Query: 403 HSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLS 462
             Y     +  AL++   M+   C P+  TY  LI   +K   +  AM +  KM  + L+
Sbjct: 397 RGYCEEGRIEAALEILGLMESNNCRPNERTYNELICGFSKRKHVHKAMTLLSKMLESKLT 456

Query: 463 PDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKL 522
           P   TY+ +I+   KAGH  +A++L   +   G +P+  TY++ I    K++  + A  L
Sbjct: 457 PSLVTYNSLIHVQCKAGHFDSAYKLLDLLKENGLVPDQWTYSVFIDTLCKSKRMEEACDL 516

Query: 523 YRDMQNAGFEPDKVTYSIVMEVLGHC--GYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLW 580
           +  ++  G + ++V Y+ +++  GHC  G +DEA ++   M  ++ +P+   Y  L+   
Sbjct: 517 FNSLKEKGIKANEVMYTALID--GHCKAGKIDEAISLLERMHSEDCLPNSSTYNSLIYGV 574

Query: 581 GKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSL 640
            K G V++     E M + G++P V T   L+   LR G    A  +   M++ G KP +
Sbjct: 575 CKEGKVQEGLSMVENMSKMGVKPTVATYTILIEEMLREGDFDHANRVFNQMVSFGHKPDV 634

Query: 641 QTYTLLL-SCCT 651
            TYT  + + CT
Sbjct: 635 YTYTAFIHTYCT 646



 Score =  151 bits (381), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 108/393 (27%), Positives = 184/393 (46%), Gaps = 46/393 (11%)

Query: 291 FASTGNVVESVSRILRQWKWGPLAEEALGNTNYSMDAYQANQVLKQLQDHTVALGFFNWL 350
           ++  GN+VE+   + + ++ G L+ ++   T+  +   + N V         A   FN +
Sbjct: 224 YSKMGNIVEANLYVSKIFQAG-LSPDSFTYTSLILGYCRNNDV-------NSAYKVFNMM 275

Query: 351 RRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHS-YGRAN 409
             + G + +E +YTT++  L  A +      L  +M  D C P V TY  +IH+ +G   
Sbjct: 276 PNK-GCRRNEVSYTTIIHGLCEAGRIDEGISLFKKMREDDCYPTVRTYTVIIHALFGNDR 334

Query: 410 YLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYS 469
            L E +D+F +M+   CEP+  TY  ++D   K   LD +  +  +M   GL P   TY+
Sbjct: 335 NL-EGMDLFNEMRERSCEPNVHTYTVMVDAMCKERKLDESRRILNEMMEKGLVPSVVTYN 393

Query: 470 VII----------------------NC-------------LGKAGHLQAAHQLFCEMVNQ 494
            +I                      NC               K  H+  A  L  +M+  
Sbjct: 394 ALIRGYCEEGRIEAALEILGLMESNNCRPNERTYNELICGFSKRKHVHKAMTLLSKMLES 453

Query: 495 GCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEA 554
              P+LVTYN +I +Q KA ++ SA KL   ++  G  PD+ TYS+ ++ L     ++EA
Sbjct: 454 KLTPSLVTYNSLIHVQCKAGHFDSAYKLLDLLKENGLVPDQWTYSVFIDTLCKSKRMEEA 513

Query: 555 EAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSA 614
             +F  ++ K    +E +Y  L+D   KAG + +A    E M      PN  T NSL+  
Sbjct: 514 CDLFNSLKEKGIKANEVMYTALIDGHCKAGKIDEAISLLERMHSEDCLPNSSTYNSLIYG 573

Query: 615 FLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
             + G++ +   +++ M  +G+KP++ TYT+L+
Sbjct: 574 VCKEGKVQEGLSMVENMSKMGVKPTVATYTILI 606



 Score =  144 bits (364), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 83/281 (29%), Positives = 141/281 (50%)

Query: 359 DEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVF 418
           +E TY  ++    + +       LL +M+     P++VTYN LIH   +A + + A  + 
Sbjct: 423 NERTYNELICGFSKRKHVHKAMTLLSKMLESKLTPSLVTYNSLIHVQCKAGHFDSAYKLL 482

Query: 419 KQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKA 478
             ++  G  PD+ TY   ID   K+  ++ A D++  ++  G+  +   Y+ +I+   KA
Sbjct: 483 DLLKENGLVPDQWTYSVFIDTLCKSKRMEEACDLFNSLKEKGIKANEVMYTALIDGHCKA 542

Query: 479 GHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTY 538
           G +  A  L   M ++ C+PN  TYN +I    K    Q  L +  +M   G +P   TY
Sbjct: 543 GKIDEAISLLERMHSEDCLPNSSTYNSLIYGVCKEGKVQEGLSMVENMSKMGVKPTVATY 602

Query: 539 SIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQ 598
           +I++E +   G  D A  VF +M      PD   Y   +  +  +GNV++A      M++
Sbjct: 603 TILIEEMLREGDFDHANRVFNQMVSFGHKPDVYTYTAFIHTYCTSGNVKEAEGMMARMIE 662

Query: 599 AGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPS 639
           AG+ P+  T   L+SA+ R+G   DA+++L+ ML+ G  PS
Sbjct: 663 AGVMPDSLTYTLLISAYERLGLAYDAFNVLKRMLDAGCDPS 703



 Score =  130 bits (327), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 108/447 (24%), Positives = 186/447 (41%), Gaps = 42/447 (9%)

Query: 337 LQDHTVALGFFNWLRRQAG---FKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQP 393
           + D    L F   + R      FK    +Y  ++ +L R      + ++  +M+ D   P
Sbjct: 153 VDDIRFLLDFLRQMNRDDNDIKFKLSVRSYNELLMMLARFLMIDEMKRVYTEMLNDMIVP 212

Query: 394 NVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLI-------DIHA----- 441
           N+ T N ++++Y +   + EA     ++   G  PD  TY +LI       D+++     
Sbjct: 213 NIYTLNTMVNAYSKMGNIVEANLYVSKIFQAGLSPDSFTYTSLILGYCRNNDVNSAYKVF 272

Query: 442 -----------------------KAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKA 478
                                  +AG +D  + ++KKM+     P   TY+VII+ L   
Sbjct: 273 NMMPNKGCRRNEVSYTTIIHGLCEAGRIDEGISLFKKMREDDCYPTVRTYTVIIHALFGN 332

Query: 479 GHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTY 538
                   LF EM  + C PN+ TY +M+    K R    + ++  +M   G  P  VTY
Sbjct: 333 DRNLEGMDLFNEMRERSCEPNVHTYTVMVDAMCKERKLDESRRILNEMMEKGLVPSVVTY 392

Query: 539 SIVMEVLGHC--GYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAM 596
           + ++   G+C  G ++ A  +   M   N  P+E  Y  L+  + K  +V KA      M
Sbjct: 393 NALIR--GYCEEGRIEAALEILGLMESNNCRPNERTYNELICGFSKRKHVHKAMTLLSKM 450

Query: 597 LQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSP 656
           L++ L P++ T NSL+    + G    AY LL  +   GL P   TY++ +    +++  
Sbjct: 451 LESKLTPSLVTYNSLIHVQCKAGHFDSAYKLLDLLKENGLVPDQWTYSVFIDTLCKSKRM 510

Query: 657 YDMGFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRESKRGLVDAV 716
            +       +   G  A+  + +    G       D   S LE MHSED        +++
Sbjct: 511 EEACDLFNSLKEKGIKANEVMYTALIDGHCKAGKIDEAISLLERMHSEDCLPNSSTYNSL 570

Query: 717 VDFLHKSGLKEEAGSVWEVAAQKNVYP 743
           +  + K G  +E  S+ E  ++  V P
Sbjct: 571 IYGVCKEGKVQEGLSMVENMSKMGVKP 597



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 72/251 (28%), Positives = 127/251 (50%)

Query: 362 TYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQM 421
           TY +++ +  +A  F +  KLLD +  +G  P+  TY+  I +  ++  + EA D+F  +
Sbjct: 461 TYNSLIHVQCKAGHFDSAYKLLDLLKENGLVPDQWTYSVFIDTLCKSKRMEEACDLFNSL 520

Query: 422 QVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHL 481
           +  G + + V Y  LID H KAG +D A+ + ++M +    P++ TY+ +I  + K G +
Sbjct: 521 KEKGIKANEVMYTALIDGHCKAGKIDEAISLLERMHSEDCLPNSSTYNSLIYGVCKEGKV 580

Query: 482 QAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIV 541
           Q    +   M   G  P + TY I+I    +  ++  A +++  M + G +PD  TY+  
Sbjct: 581 QEGLSMVENMSKMGVKPTVATYTILIEEMLREGDFDHANRVFNQMVSFGHKPDVYTYTAF 640

Query: 542 MEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGL 601
           +      G + EAE + A M     +PD   Y LL+  + + G    A+   + ML AG 
Sbjct: 641 IHTYCTSGNVKEAEGMMARMIEAGVMPDSLTYTLLISAYERLGLAYDAFNVLKRMLDAGC 700

Query: 602 RPNVPTCNSLL 612
            P+ P  N+L+
Sbjct: 701 DPSHPIWNNLI 711



 Score =  112 bits (281), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 102/367 (27%), Positives = 156/367 (42%), Gaps = 62/367 (16%)

Query: 342 VALGFFNWLRR-QAGFKHDEHTYTTMVGILGRARQFGA-----------------INKLL 383
           +AL FFN L   + GFKH   +++ ++ IL     FG                  I  LL
Sbjct: 101 IALQFFNSLPLIKPGFKHTVKSHSFLLKILIPNNLFGVGEKIRISMIKACVSVDDIRFLL 160

Query: 384 D---QMVRDG----CQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTL 436
           D   QM RD      + +V +YN L+    R   ++E   V+ +M      P+  T  T+
Sbjct: 161 DFLRQMNRDDNDIKFKLSVRSYNELLMMLARFLMIDEMKRVYTEMLNDMIVPNIYTLNTM 220

Query: 437 IDIHAKAGFLDVAMDMYKKMQAAGLSPDTFT----------------------------- 467
           ++ ++K G +  A     K+  AGLSPD+FT                             
Sbjct: 221 VNAYSKMGNIVEANLYVSKIFQAGLSPDSFTYTSLILGYCRNNDVNSAYKVFNMMPNKGC 280

Query: 468 ------YSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMI-ALQAKARNYQSAL 520
                 Y+ II+ L +AG +     LF +M    C P + TY ++I AL    RN +  +
Sbjct: 281 RRNEVSYTTIIHGLCEAGRIDEGISLFKKMREDDCYPTVRTYTVIIHALFGNDRNLE-GM 339

Query: 521 KLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLW 580
            L+ +M+    EP+  TY+++++ +     LDE+  +  EM  K  VP    Y  L+  +
Sbjct: 340 DLFNEMRERSCEPNVHTYTVMVDAMCKERKLDESRRILNEMMEKGLVPSVVTYNALIRGY 399

Query: 581 GKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSL 640
            + G +  A E    M     RPN  T N L+  F +   +  A  LL  ML   L PSL
Sbjct: 400 CEEGRIEAALEILGLMESNNCRPNERTYNELICGFSKRKHVHKAMTLLSKMLESKLTPSL 459

Query: 641 QTYTLLL 647
            TY  L+
Sbjct: 460 VTYNSLI 466



 Score = 99.8 bits (247), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 61/234 (26%), Positives = 111/234 (47%), Gaps = 2/234 (0%)

Query: 350 LRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRAN 409
           L ++ G   D+ TY+  +  L ++++      L + +   G + N V Y  LI  + +A 
Sbjct: 484 LLKENGLVPDQWTYSVFIDTLCKSKRMEEACDLFNSLKEKGIKANEVMYTALIDGHCKAG 543

Query: 410 YLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYS 469
            ++EA+ + ++M    C P+  TY +LI    K G +   + M + M   G+ P   TY+
Sbjct: 544 KIDEAISLLERMHSEDCLPNSSTYNSLIYGVCKEGKVQEGLSMVENMSKMGVKPTVATYT 603

Query: 470 VIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNA 529
           ++I  + + G    A+++F +MV+ G  P++ TY   I     + N + A  +   M  A
Sbjct: 604 ILIEEMLREGDFDHANRVFNQMVSFGHKPDVYTYTAFIHTYCTSGNVKEAEGMMARMIEA 663

Query: 530 GFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKA 583
           G  PD +TY++++      G   +A  V   M      P  P++  L+  W KA
Sbjct: 664 GVMPDSLTYTLLISAYERLGLAYDAFNVLKRMLDAGCDPSHPIWNNLI--WYKA 715


>gi|449465535|ref|XP_004150483.1| PREDICTED: pentatricopeptide repeat-containing protein At1g71060,
           mitochondrial-like [Cucumis sativus]
          Length = 542

 Score =  158 bits (400), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 96/373 (25%), Positives = 183/373 (49%), Gaps = 4/373 (1%)

Query: 332 QVLKQLQDH-TVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDG 390
           +VLK+L +   +AL FF W  +Q GFKH   +Y  ++  LG+ +QF  I  L+  M R G
Sbjct: 127 EVLKKLSNAGFLALSFFRWAEKQKGFKHTTESYNLLIEALGKIKQFNVIWNLVSDMKRKG 186

Query: 391 CQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAM 450
                 T+  +   Y RA  + EA++ F++M+  G +     +  L+D   K+  +  A 
Sbjct: 187 ILSRE-TFALITRRYARARKVKEAVESFEKMEKFGFQMGVSDFNRLLDTLCKSRNVKKAQ 245

Query: 451 DMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQ 510
           +++ KM+     PD  +Y++++   G+  +L   ++++ EM ++G  P++VT+ I+I   
Sbjct: 246 EVFDKMKHGRFKPDIKSYTILLEGWGQDQNLLKLNEVYREMRDEGFEPDVVTFGILINAH 305

Query: 511 AKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDE 570
            KAR Y  A++L+ +M+    +P    +  ++  LG    L EA   F +++   + P+ 
Sbjct: 306 CKARKYDEAIRLFHEMEAKNIKPSPHVFCTLINGLGSEKRLKEALEFFEQLKLSGFAPEA 365

Query: 571 PVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQG 630
           P Y  +V  +  +  +  A+   + M ++G+ PN  T + +L   ++  +  +AY + Q 
Sbjct: 366 PTYNAVVGAYCWSMKMAYAYRMVDEMRKSGVGPNSRTYDIILHHLIKGRKSKEAYSVFQR 425

Query: 631 M-LNLGLKPSLQTYTLLLSC-CTEARSPYDMGFCHELMAVSGHPAHMFLLSMPSPGPDGQ 688
           M    G +P+L TY +++   C E R    +    E+ A    P      ++ +      
Sbjct: 426 MSREPGCEPTLSTYDIMIRMFCNEERVDMAIQIWDEMKAKGVLPGMHLFSTLINSLCHEH 485

Query: 689 NVRDHVGSFLEMM 701
            + D    F EM+
Sbjct: 486 KLEDACTYFQEML 498



 Score =  122 bits (306), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 83/356 (23%), Positives = 175/356 (49%), Gaps = 10/356 (2%)

Query: 284 LAPFSRHFASTGNVVESVSRILRQWKWGPLAEEALGNTNYSMDAYQANQVLKQLQDHTVA 343
            A  +R +A    V E+V    +  K+G   +  + + N  +D    ++ +K+ Q+    
Sbjct: 193 FALITRRYARARKVKEAVESFEKMEKFG--FQMGVSDFNRLLDTLCKSRNVKKAQE---- 246

Query: 344 LGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIH 403
              F+ ++    FK D  +YT ++   G+ +    +N++  +M  +G +P+VVT+  LI+
Sbjct: 247 --VFDKMK-HGRFKPDIKSYTILLEGWGQDQNLLKLNEVYREMRDEGFEPDVVTFGILIN 303

Query: 404 SYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSP 463
           ++ +A   +EA+ +F +M+    +P    +CTLI+       L  A++ +++++ +G +P
Sbjct: 304 AHCKARKYDEAIRLFHEMEAKNIKPSPHVFCTLINGLGSEKRLKEALEFFEQLKLSGFAP 363

Query: 464 DTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLY 523
           +  TY+ ++     +  +  A+++  EM   G  PN  TY+I++    K R  + A  ++
Sbjct: 364 EAPTYNAVVGAYCWSMKMAYAYRMVDEMRKSGVGPNSRTYDIILHHLIKGRKSKEAYSVF 423

Query: 524 RDM-QNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGK 582
           + M +  G EP   TY I++ +  +   +D A  ++ EM+ K  +P   ++  L++    
Sbjct: 424 QRMSREPGCEPTLSTYDIMIRMFCNEERVDMAIQIWDEMKAKGVLPGMHLFSTLINSLCH 483

Query: 583 AGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKP 638
              +  A  +++ ML  G+RP     ++L  A L  G+   A  + + +  L   P
Sbjct: 484 EHKLEDACTYFQEMLDVGIRPPATMFSNLKQALLDDGRKDTALLMAEKIKKLRKAP 539


>gi|357441365|ref|XP_003590960.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355480008|gb|AES61211.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 590

 Score =  158 bits (400), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 93/313 (29%), Positives = 156/313 (49%), Gaps = 10/313 (3%)

Query: 345 GFFNWLRRQAGF----------KHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPN 394
           GFFN  + +             K D   Y  ++    +A +    +K+LD+M + G +P+
Sbjct: 121 GFFNMKKIEKAIQVMEILEKHGKPDVFAYNAVISGFCKADRVDHASKVLDRMKKRGFEPD 180

Query: 395 VVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYK 454
           VVTYN LI ++     L+ AL V  Q+    C+P  +TY  LI+     G +D AM +  
Sbjct: 181 VVTYNILIGNFCGRGRLDLALRVMDQLLKDNCKPTVITYTILIEATITQGGIDEAMKLLD 240

Query: 455 KMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKAR 514
           +M + GL PD +TY+V++N + K G L  A +    +   GC+  + TYNI++       
Sbjct: 241 EMLSRGLRPDRYTYNVVVNGMCKEGMLDRAFEFLSRISKNGCVAGVSTYNILLRDLLNEG 300

Query: 515 NYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYG 574
            ++   KL  DM   G EP+ +TYS ++  L   G +DEA+ V   M+ K   PD   Y 
Sbjct: 301 KWEYGEKLMSDMLVKGCEPNPITYSTLITALCRDGKIDEAKNVLKVMKEKALAPDGYSYD 360

Query: 575 LLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNL 634
            L+    + G V  A E+ + M+  G  P++ + NS+L++  + G   +A ++ + +  +
Sbjct: 361 PLISALCREGKVDLAIEFLDDMISGGHLPDILSYNSILASLCKNGNADEALNIFEKLGEV 420

Query: 635 GLKPSLQTYTLLL 647
           G  P+  +Y  L 
Sbjct: 421 GCPPNAGSYNTLF 433



 Score =  135 bits (341), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 83/299 (27%), Positives = 144/299 (48%), Gaps = 2/299 (0%)

Query: 352 RQAGFKHDEHTYTTMVG-ILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANY 410
           ++ GF+ D  TY  ++G   GR R   A+ +++DQ+++D C+P V+TY  LI +      
Sbjct: 173 KKRGFEPDVVTYNILIGNFCGRGRLDLAL-RVMDQLLKDNCKPTVITYTILIEATITQGG 231

Query: 411 LNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSV 470
           ++EA+ +  +M   G  PDR TY  +++   K G LD A +   ++   G      TY++
Sbjct: 232 IDEAMKLLDEMLSRGLRPDRYTYNVVVNGMCKEGMLDRAFEFLSRISKNGCVAGVSTYNI 291

Query: 471 IINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAG 530
           ++  L   G  +   +L  +M+ +GC PN +TY+ +I    +      A  + + M+   
Sbjct: 292 LLRDLLNEGKWEYGEKLMSDMLVKGCEPNPITYSTLITALCRDGKIDEAKNVLKVMKEKA 351

Query: 531 FEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAW 590
             PD  +Y  ++  L   G +D A     +M     +PD   Y  ++    K GN  +A 
Sbjct: 352 LAPDGYSYDPLISALCREGKVDLAIEFLDDMISGGHLPDILSYNSILASLCKNGNADEAL 411

Query: 591 EWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSC 649
             +E + + G  PN  + N+L  A    G    A  ++  ML+ G+ P   TY  L+SC
Sbjct: 412 NIFEKLGEVGCPPNAGSYNTLFGALWSSGDKIRALGMILEMLSNGIDPDEITYNSLISC 470



 Score =  134 bits (336), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 87/300 (29%), Positives = 147/300 (49%), Gaps = 13/300 (4%)

Query: 355 GFKHDEHTYTTMV------GILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRA 408
           G + D +TY  +V      G+L RA +F      L ++ ++GC   V TYN L+      
Sbjct: 246 GLRPDRYTYNVVVNGMCKEGMLDRAFEF------LSRISKNGCVAGVSTYNILLRDLLNE 299

Query: 409 NYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTY 468
                   +   M V GCEP+ +TY TLI    + G +D A ++ K M+   L+PD ++Y
Sbjct: 300 GKWEYGEKLMSDMLVKGCEPNPITYSTLITALCRDGKIDEAKNVLKVMKEKALAPDGYSY 359

Query: 469 SVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQN 528
             +I+ L + G +  A +   +M++ G +P++++YN ++A   K  N   AL ++  +  
Sbjct: 360 DPLISALCREGKVDLAIEFLDDMISGGHLPDILSYNSILASLCKNGNADEALNIFEKLGE 419

Query: 529 AGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRK 588
            G  P+  +Y+ +   L   G    A  +  EM      PDE  Y  L+    + G V +
Sbjct: 420 VGCPPNAGSYNTLFGALWSSGDKIRALGMILEMLSNGIDPDEITYNSLISCLCRDGLVDQ 479

Query: 589 AWEWYEAMLQA-GLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
           A E    M ++   +P V + N++L    +V ++ DA  +L  M+N G  P+  TYTLL+
Sbjct: 480 AIELLVDMFESEKCQPTVISYNTVLLGLCKVQRIIDAIEVLAAMVNEGCLPNETTYTLLI 539



 Score = 97.1 bits (240), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 105/415 (25%), Positives = 185/415 (44%), Gaps = 26/415 (6%)

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
           +E+L   + M   G +PD +    LI        ++ A+ + + ++  G  PD F Y+ +
Sbjct: 94  DESLYFLQHMVNRGYKPDVILCTKLIKGFFNMKKIEKAIQVMEILEKHG-KPDVFAYNAV 152

Query: 472 INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF 531
           I+   KA  +  A ++   M  +G  P++VTYNI+I           AL++   +     
Sbjct: 153 ISGFCKADRVDHASKVLDRMKKRGFEPDVVTYNILIGNFCGRGRLDLALRVMDQLLKDNC 212

Query: 532 EPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWE 591
           +P  +TY+I++E     G +DEA  +  EM  +   PD   Y ++V+   K G + +A+E
Sbjct: 213 KPTVITYTILIEATITQGGIDEAMKLLDEMLSRGLRPDRYTYNVVVNGMCKEGMLDRAFE 272

Query: 592 WYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTY-TLLLSCC 650
           +   + + G    V T N LL   L  G+      L+  ML  G +P+  TY TL+ + C
Sbjct: 273 FLSRISKNGCVAGVSTYNILLRDLLNEGKWEYGEKLMSDMLVKGCEPNPITYSTLITALC 332

Query: 651 -----TEARSPYDMGFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSED 705
                 EA++   +    + +A  G+     + ++   G       D    FL+ M S  
Sbjct: 333 RDGKIDEAKNVLKV-MKEKALAPDGYSYDPLISALCREGK-----VDLAIEFLDDMISGG 386

Query: 706 RESKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAVKEKGMSYWLINLHVMSDGT 765
                   ++++  L K+G  +EA +++E   +    P+A      SY  +   + S G 
Sbjct: 387 HLPDILSYNSILASLCKNGNADEALNIFEKLGEVGCPPNA-----GSYNTLFGALWSSGD 441

Query: 766 AVIALSRTLAWFRKQMLISGVGPSRIDIVTGWGRRSRVTGTSLVRQAVQELLHMF 820
            + AL   L     +ML +G+ P   D +T     S +    LV QA++ L+ MF
Sbjct: 442 KIRALGMIL-----EMLSNGIDP---DEITYNSLISCLCRDGLVDQAIELLVDMF 488



 Score = 57.0 bits (136), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 37/137 (27%), Positives = 69/137 (50%), Gaps = 1/137 (0%)

Query: 511 AKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDE 570
            K+  Y  +L   + M N G++PD +  + +++   +   +++A  V  E+  K+  PD 
Sbjct: 88  CKSAKYDESLYFLQHMVNRGYKPDVILCTKLIKGFFNMKKIEKAIQVM-EILEKHGKPDV 146

Query: 571 PVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQG 630
             Y  ++  + KA  V  A +  + M + G  P+V T N L+  F   G+L  A  ++  
Sbjct: 147 FAYNAVISGFCKADRVDHASKVLDRMKKRGFEPDVVTYNILIGNFCGRGRLDLALRVMDQ 206

Query: 631 MLNLGLKPSLQTYTLLL 647
           +L    KP++ TYT+L+
Sbjct: 207 LLKDNCKPTVITYTILI 223



 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 43/160 (26%), Positives = 76/160 (47%), Gaps = 10/160 (6%)

Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGIL----GRARQFGAINKLLDQMVRDGCQPNVVTY 398
           AL  F  L  + G   +  +Y T+ G L     + R  G I     +M+ +G  P+ +TY
Sbjct: 410 ALNIFEKLG-EVGCPPNAGSYNTLFGALWSSGDKIRALGMIL----EMLSNGIDPDEITY 464

Query: 399 NRLIHSYGRANYLNEALDVFKQM-QVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQ 457
           N LI    R   +++A+++   M +   C+P  ++Y T++    K   +  A+++   M 
Sbjct: 465 NSLISCLCRDGLVDQAIELLVDMFESEKCQPTVISYNTVLLGLCKVQRIIDAIEVLAAMV 524

Query: 458 AAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCI 497
             G  P+  TY+++I  +G AG    A +L   +VN   I
Sbjct: 525 NEGCLPNETTYTLLIQGIGFAGWRYDAMELANLLVNMDAI 564


>gi|449462479|ref|XP_004148968.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Cucumis sativus]
          Length = 580

 Score =  158 bits (400), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 139/518 (26%), Positives = 219/518 (42%), Gaps = 67/518 (12%)

Query: 284 LAPFSRHFASTGNVVESVSRILRQWKWGPLAEEALGNTNYSMDAYQANQVLKQLQDHTVA 343
           +A F RH   TGNV  + +              +L + N+ +        L +++ ++  
Sbjct: 36  IAFFLRH-CKTGNVTATHALHFFHLMMRSTPTPSLSSFNHLLSG------LAKIKHYSQV 88

Query: 344 LGFFNWLRRQAGFKHDEHTYTTMVGIL---GRARQ-FGAINKLLDQMVRDGCQPNVVTYN 399
              +N +R  +G   D  T   ++  L    R R+ F A   +L    R G  PN+VTYN
Sbjct: 89  FSLYNQMRL-SGLSSDRCTLNILLNCLCNVNRLREGFAAFAGIL----RRGYSPNIVTYN 143

Query: 400 RLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKM--- 456
            LI      + ++EA  +F +MQ +GC PD VTY TLI      G +++A+ ++++M   
Sbjct: 144 TLIKGLCMEHRISEATRLFLRMQKLGCTPDVVTYGTLIKGLCGTGNINIALKLHQEMLND 203

Query: 457 ---QAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPN----------LVTY 503
                    P+  TY++I++ L K G    A QLF EM  QG IPN          +VT+
Sbjct: 204 ISRYEINCKPNVITYNIIVDGLCKVGREDEAKQLFEEMKTQGMIPNEMLDQGLQPDMVTF 263

Query: 504 NIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRR 563
           N++I    K      A KL   M  +G  PD VTY+ ++E     G L+ A  +F  M  
Sbjct: 264 NVLIDTLCKEGKVIEAKKLLGVMIESGIVPDLVTYNSLIEGFCMVGDLNSARELFVSMPS 323

Query: 564 KNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSD 623
           K   PD   Y +L++ + K   V +A + Y  ML  G RPNV T +SLL      G++ D
Sbjct: 324 KGCEPDVISYNVLINGYSKTLKVEEAMKLYNEMLLVGKRPNVITYDSLLKGIFLAGKVDD 383

Query: 624 AYHLLQGMLNLGLKPSLQTYTLLLS------CCTEARSPYDM------------------ 659
           A  L   M   G+  +  TY + L       C  EA   +                    
Sbjct: 384 AKKLFSVMKAHGIAENSYTYGIFLDGLCKNDCLFEAMKLFTELKSSNFKLEIENLNCLID 443

Query: 660 GFCH-----------ELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRES 708
           G C            E ++  GH  ++   ++   G   +   D     ++ M +     
Sbjct: 444 GLCKAGKLETAWELFEKLSNEGHEPNVVTYTIMIHGFCREGQVDKANVLIQKMEANGCTP 503

Query: 709 KRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAV 746
                + ++   ++S   EE   +    AQK+V PDA+
Sbjct: 504 DIITYNTLMRGFYESNKLEEVVQLLHRMAQKDVSPDAI 541



 Score =  127 bits (319), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 82/313 (26%), Positives = 147/313 (46%)

Query: 335 KQLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPN 394
           KQL +     G         G + D  T+  ++  L +  +     KLL  M+  G  P+
Sbjct: 235 KQLFEEMKTQGMIPNEMLDQGLQPDMVTFNVLIDTLCKEGKVIEAKKLLGVMIESGIVPD 294

Query: 395 VVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYK 454
           +VTYN LI  +     LN A ++F  M   GCEPD ++Y  LI+ ++K   ++ AM +Y 
Sbjct: 295 LVTYNSLIEGFCMVGDLNSARELFVSMPSKGCEPDVISYNVLINGYSKTLKVEEAMKLYN 354

Query: 455 KMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKAR 514
           +M   G  P+  TY  ++  +  AG +  A +LF  M   G   N  TY I +    K  
Sbjct: 355 EMLLVGKRPNVITYDSLLKGIFLAGKVDDAKKLFSVMKAHGIAENSYTYGIFLDGLCKND 414

Query: 515 NYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYG 574
               A+KL+ +++++ F+ +    + +++ L   G L+ A  +F ++  +   P+   Y 
Sbjct: 415 CLFEAMKLFTELKSSNFKLEIENLNCLIDGLCKAGKLETAWELFEKLSNEGHEPNVVTYT 474

Query: 575 LLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNL 634
           +++  + + G V KA    + M   G  P++ T N+L+  F    +L +   LL  M   
Sbjct: 475 IMIHGFCREGQVDKANVLIQKMEANGCTPDIITYNTLMRGFYESNKLEEVVQLLHRMAQK 534

Query: 635 GLKPSLQTYTLLL 647
            + P   T ++++
Sbjct: 535 DVSPDAITCSIVV 547



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 76/282 (26%), Positives = 141/282 (50%), Gaps = 12/282 (4%)

Query: 353 QAGFKHDEHTYTT------MVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYG 406
           ++G   D  TY +      MVG L  AR+      L   M   GC+P+V++YN LI+ Y 
Sbjct: 288 ESGIVPDLVTYNSLIEGFCMVGDLNSARE------LFVSMPSKGCEPDVISYNVLINGYS 341

Query: 407 RANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTF 466
           +   + EA+ ++ +M +VG  P+ +TY +L+     AG +D A  ++  M+A G++ +++
Sbjct: 342 KTLKVEEAMKLYNEMLLVGKRPNVITYDSLLKGIFLAGKVDDAKKLFSVMKAHGIAENSY 401

Query: 467 TYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDM 526
           TY + ++ L K   L  A +LF E+ +      +   N +I    KA   ++A +L+  +
Sbjct: 402 TYGIFLDGLCKNDCLFEAMKLFTELKSSNFKLEIENLNCLIDGLCKAGKLETAWELFEKL 461

Query: 527 QNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNV 586
            N G EP+ VTY+I++      G +D+A  +  +M      PD   Y  L+  + ++  +
Sbjct: 462 SNEGHEPNVVTYTIMIHGFCREGQVDKANVLIQKMEANGCTPDIITYNTLMRGFYESNKL 521

Query: 587 RKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLL 628
            +  +    M Q  + P+  TC+ ++    +  +  +  HLL
Sbjct: 522 EEVVQLLHRMAQKDVSPDAITCSIVVDMLSKDEKYQECLHLL 563



 Score = 70.1 bits (170), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 39/146 (26%), Positives = 75/146 (51%), Gaps = 1/146 (0%)

Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLI 402
           A+  F  L+  + FK +      ++  L +A +     +L +++  +G +PNVVTY  +I
Sbjct: 419 AMKLFTELK-SSNFKLEIENLNCLIDGLCKAGKLETAWELFEKLSNEGHEPNVVTYTIMI 477

Query: 403 HSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLS 462
           H + R   +++A  + ++M+  GC PD +TY TL+    ++  L+  + +  +M    +S
Sbjct: 478 HGFCREGQVDKANVLIQKMEANGCTPDIITYNTLMRGFYESNKLEEVVQLLHRMAQKDVS 537

Query: 463 PDTFTYSVIINCLGKAGHLQAAHQLF 488
           PD  T S++++ L K    Q    L 
Sbjct: 538 PDAITCSIVVDMLSKDEKYQECLHLL 563


>gi|357140426|ref|XP_003571769.1| PREDICTED: pentatricopeptide repeat-containing protein At1g51965,
           mitochondrial-like [Brachypodium distachyon]
          Length = 637

 Score =  158 bits (400), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 76/189 (40%), Positives = 110/189 (58%)

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
           + G   D   Y  +   LG+ +Q   I+ L D+M   G  P++ TYN +I SYGR   ++
Sbjct: 421 EKGIDTDIGMYNMVFSALGKLKQVSFISTLFDKMKASGIAPDLFTYNIMISSYGRVGLVD 480

Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
           +A  +F++M+   C+PD +TY TLI+   K G LD A  ++K+MQ  G  PD FTYS +I
Sbjct: 481 KASGLFEEMEASSCKPDVITYNTLINCLGKNGDLDEAHILFKEMQEKGYDPDVFTYSTLI 540

Query: 473 NCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFE 532
            C GK+  +  A  LF EM+ +GCIPN+VTYNI++    +      A K Y  M+  G  
Sbjct: 541 ECFGKSNKVDMACSLFDEMIAEGCIPNIVTYNILLDCLERRGKTAEAHKHYETMKQQGLT 600

Query: 533 PDKVTYSIV 541
           PD +TYSI+
Sbjct: 601 PDSITYSIL 609



 Score =  142 bits (358), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 93/335 (27%), Positives = 158/335 (47%), Gaps = 33/335 (9%)

Query: 344 LGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYN---R 400
           L FF+ +  + G   +   Y T++  LG+ +    +  +L +M+   CQPN  TY+    
Sbjct: 276 LSFFDEMVSR-GCALNLIAYNTVIEALGKNKMVDKVIFVLSKMIESDCQPNQFTYSLTLD 334

Query: 401 LIHSYGRANYLNEALD-----------------------------VFKQMQVVGCEPDRV 431
           ++ + G+ + LNE LD                             VF +M       DR 
Sbjct: 335 ILATEGQLHRLNEVLDICDRYLNKSIYSYLVKSLCKSGHASEAHNVFCRMWNSHESGDRD 394

Query: 432 TYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEM 491
            + +++++   +G    A+D+   M   G+  D   Y+++ + LGK   +     LF +M
Sbjct: 395 AFISMLEVLCNSGKTLEAIDLLHMMPEKGIDTDIGMYNMVFSALGKLKQVSFISTLFDKM 454

Query: 492 VNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYL 551
              G  P+L TYNIMI+   +      A  L+ +M+ +  +PD +TY+ ++  LG  G L
Sbjct: 455 KASGIAPDLFTYNIMISSYGRVGLVDKASGLFEEMEASSCKPDVITYNTLINCLGKNGDL 514

Query: 552 DEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSL 611
           DEA  +F EM+ K + PD   Y  L++ +GK+  V  A   ++ M+  G  PN+ T N L
Sbjct: 515 DEAHILFKEMQEKGYDPDVFTYSTLIECFGKSNKVDMACSLFDEMIAEGCIPNIVTYNIL 574

Query: 612 LSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLL 646
           L    R G+ ++A+   + M   GL P   TY++L
Sbjct: 575 LDCLERRGKTAEAHKHYETMKQQGLTPDSITYSIL 609



 Score =  137 bits (344), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 94/385 (24%), Positives = 169/385 (43%), Gaps = 48/385 (12%)

Query: 306 RQWKWGPLAEEALGNTNYSMDAYQANQVLKQLQDHTV---ALGFFNWLRRQAGFKHDEHT 362
           R+   G    E +    Y +D +  N +L  L    +   A   F  ++++     D +T
Sbjct: 200 REVSKGFEVYEEMHRKGYKLDIFAYNMLLDALAKAGMVDQAYQVFEDMKQKYCVP-DAYT 258

Query: 363 YTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQ 422
           YT ++ + G+  Q        D+MV  GC  N++ YN +I + G+   +++ + V  +M 
Sbjct: 259 YTILIRMSGKTGQTYKFLSFFDEMVSRGCALNLIAYNTVIEALGKNKMVDKVIFVLSKMI 318

Query: 423 VVGCEPDRVTYCTLIDIHAKAG---FLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAG 479
              C+P++ TY   +DI A  G    L+  +D+  +     +      YS ++  L K+G
Sbjct: 319 ESDCQPNQFTYSLTLDILATEGQLHRLNEVLDICDRYLNKSI------YSYLVKSLCKSG 372

Query: 480 HLQAAHQLFCEMVN-----------------------------------QGCIPNLVTYN 504
           H   AH +FC M N                                   +G   ++  YN
Sbjct: 373 HASEAHNVFCRMWNSHESGDRDAFISMLEVLCNSGKTLEAIDLLHMMPEKGIDTDIGMYN 432

Query: 505 IMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRK 564
           ++ +   K +       L+  M+ +G  PD  TY+I++   G  G +D+A  +F EM   
Sbjct: 433 MVFSALGKLKQVSFISTLFDKMKASGIAPDLFTYNIMISSYGRVGLVDKASGLFEEMEAS 492

Query: 565 NWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDA 624
           +  PD   Y  L++  GK G++ +A   ++ M + G  P+V T ++L+  F +  ++  A
Sbjct: 493 SCKPDVITYNTLINCLGKNGDLDEAHILFKEMQEKGYDPDVFTYSTLIECFGKSNKVDMA 552

Query: 625 YHLLQGMLNLGLKPSLQTYTLLLSC 649
             L   M+  G  P++ TY +LL C
Sbjct: 553 CSLFDEMIAEGCIPNIVTYNILLDC 577



 Score =  119 bits (298), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 110/487 (22%), Positives = 206/487 (42%), Gaps = 41/487 (8%)

Query: 296 NVVESVSRILRQ-WKWGPLAEEA--LGNTNYSMDAYQANQVLKQL--QDHTVALGFFNWL 350
           +++ + +RILR      PLA+ A  L +   ++ A +A++V+K L          F    
Sbjct: 49  HLICAAARILRSPASPSPLADLADYLRSLRLTLTASEASEVVKALSPDPALALAFFRFAA 108

Query: 351 RRQAGFKHDEHTYTTMVGILGRAR-QFGAINKLLDQMVRDGCQPNVVTYNRL-------- 401
               GF+HD  +Y  ++ +L R++   G   +L+ QM RDG   N+ T N L        
Sbjct: 109 ASLPGFRHDAFSYNRILALLFRSKADPGEALRLVAQMERDGVAGNISTVNLLVGMGGGGV 168

Query: 402 ------------------------IHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLI 437
                                   + ++ R+  +++  +V+++M   G + D   Y  L+
Sbjct: 169 EVARCLELAKKWGLRLNGYTYKCIVQAHLRSREVSKGFEVYEEMHRKGYKLDIFAYNMLL 228

Query: 438 DIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCI 497
           D  AKAG +D A  +++ M+     PD +TY+++I   GK G        F EMV++GC 
Sbjct: 229 DALAKAGMVDQAYQVFEDMKQKYCVPDAYTYTILIRMSGKTGQTYKFLSFFDEMVSRGCA 288

Query: 498 PNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAV 557
            NL+ YN +I    K +     + +   M  +  +P++ TYS+ +++L   G L     V
Sbjct: 289 LNLIAYNTVIEALGKNKMVDKVIFVLSKMIESDCQPNQFTYSLTLDILATEGQLHRLNEV 348

Query: 558 FAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLR 617
                R     ++ +Y  LV    K+G+  +A   +  M  +    +     S+L     
Sbjct: 349 LDICDR---YLNKSIYSYLVKSLCKSGHASEAHNVFCRMWNSHESGDRDAFISMLEVLCN 405

Query: 618 VGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGFCHELMAVSGHPAHMFL 677
            G+  +A  LL  M   G+   +  Y ++ S   + +    +    + M  SG    +F 
Sbjct: 406 SGKTLEAIDLLHMMPEKGIDTDIGMYNMVFSALGKLKQVSFISTLFDKMKASGIAPDLFT 465

Query: 678 LSMPSPGPDGQNVRDHVGSFLEMMHSEDRESKRGLVDAVVDFLHKSGLKEEAGSVWEVAA 737
            ++         + D      E M +   +      + +++ L K+G  +EA  +++   
Sbjct: 466 YNIMISSYGRVGLVDKASGLFEEMEASSCKPDVITYNTLINCLGKNGDLDEAHILFKEMQ 525

Query: 738 QKNVYPD 744
           +K   PD
Sbjct: 526 EKGYDPD 532



 Score =  114 bits (284), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 55/163 (33%), Positives = 95/163 (58%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           + +G   D  TY  M+   GR       + L ++M    C+P+V+TYN LI+  G+   L
Sbjct: 455 KASGIAPDLFTYNIMISSYGRVGLVDKASGLFEEMEASSCKPDVITYNTLINCLGKNGDL 514

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
           +EA  +FK+MQ  G +PD  TY TLI+   K+  +D+A  ++ +M A G  P+  TY+++
Sbjct: 515 DEAHILFKEMQEKGYDPDVFTYSTLIECFGKSNKVDMACSLFDEMIAEGCIPNIVTYNIL 574

Query: 472 INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKAR 514
           ++CL + G    AH+ +  M  QG  P+ +TY+I+  L+++++
Sbjct: 575 LDCLERRGKTAEAHKHYETMKQQGLTPDSITYSILERLESRSQ 617


>gi|449438681|ref|XP_004137116.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39710-like [Cucumis sativus]
          Length = 749

 Score =  158 bits (400), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 95/321 (29%), Positives = 164/321 (51%), Gaps = 13/321 (4%)

Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINK-LLDQMVRDGCQPNVVTYNRL 401
           AL   N L +  GF     +Y  ++  + R +Q   I + +  +MV  G  PNV TYN L
Sbjct: 151 ALSIVN-LAKSYGFMPGVLSYNAILDAVIRTKQSVKIAEGIFKEMVESGVSPNVYTYNIL 209

Query: 402 IHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGL 461
           I  +  A  L   L  F +M+  GC P+ VTY T+ID + K   +  A  + + M   GL
Sbjct: 210 IRGFCTAGNLEMGLFFFGEMERNGCLPNVVTYNTIIDAYCKLRKIGEAFKLLRLMALKGL 269

Query: 462 SPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALK 521
           +P+  +Y+V+IN L + G ++   ++  EM  +  +P+ VT+N +I       N+  AL 
Sbjct: 270 NPNLISYNVVINGLCREGQMKETSEILEEMSKRRYVPDRVTFNTLINGYCNVGNFHQALV 329

Query: 522 LYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWG 581
           L+ +M   G  P+ VTY+ ++  +   G L+ A     +MR +   P+   Y  L+D + 
Sbjct: 330 LHAEMVKNGLSPNVVTYTTLINSMCKAGNLNRAMEFLDQMRDRGLHPNGRTYTTLIDGFS 389

Query: 582 KAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQ 641
           + G +++A++  + M++ G  P + T N+L++    +G++ DA  LLQ M+  G  P + 
Sbjct: 390 QQGFLKQAYQIMKEMVENGFTPTIITYNALINGHCILGRMEDASGLLQEMIERGFIPDVV 449

Query: 642 TYTLLLSCCTEARSPYDMGFC 662
           +Y+ ++S           GFC
Sbjct: 450 SYSTIIS-----------GFC 459



 Score =  155 bits (392), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 95/315 (30%), Positives = 165/315 (52%), Gaps = 6/315 (1%)

Query: 342 VALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRL 401
           + L FF  + R  G   +  TY T++    + R+ G   KLL  M   G  PN+++YN +
Sbjct: 221 MGLFFFGEMERN-GCLPNVVTYNTIIDAYCKLRKIGEAFKLLRLMALKGLNPNLISYNVV 279

Query: 402 IHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGL 461
           I+   R   + E  ++ ++M      PDRVT+ TLI+ +   G    A+ ++ +M   GL
Sbjct: 280 INGLCREGQMKETSEILEEMSKRRYVPDRVTFNTLINGYCNVGNFHQALVLHAEMVKNGL 339

Query: 462 SPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALK 521
           SP+  TY+ +IN + KAG+L  A +   +M ++G  PN  TY  +I   ++    + A +
Sbjct: 340 SPNVVTYTTLINSMCKAGNLNRAMEFLDQMRDRGLHPNGRTYTTLIDGFSQQGFLKQAYQ 399

Query: 522 LYRDMQNAGFEPDKVTYSIVMEVLGHC--GYLDEAEAVFAEMRRKNWVPDEPVYGLLVDL 579
           + ++M   GF P  +TY+ ++   GHC  G +++A  +  EM  + ++PD   Y  ++  
Sbjct: 400 IMKEMVENGFTPTIITYNALIN--GHCILGRMEDASGLLQEMIERGFIPDVVSYSTIISG 457

Query: 580 WGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPS 639
           + +   + KA++    M+  G+ P+V T +SL+    +  +L +   L Q ML+LGL P 
Sbjct: 458 FCRNQELEKAFQLKVEMVAKGISPDVATYSSLIQGLCKQRRLGEVCDLFQEMLSLGLPPD 517

Query: 640 LQTYTLLLSC-CTEA 653
             TYT L++  C E 
Sbjct: 518 EVTYTSLINAYCIEG 532



 Score =  153 bits (387), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 99/308 (32%), Positives = 157/308 (50%), Gaps = 4/308 (1%)

Query: 359 DEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVF 418
           D  T+ T++        F     L  +MV++G  PNVVTY  LI+S  +A  LN A++  
Sbjct: 307 DRVTFNTLINGYCNVGNFHQALVLHAEMVKNGLSPNVVTYTTLINSMCKAGNLNRAMEFL 366

Query: 419 KQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKA 478
            QM+  G  P+  TY TLID  ++ GFL  A  + K+M   G +P   TY+ +IN     
Sbjct: 367 DQMRDRGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVENGFTPTIITYNALINGHCIL 426

Query: 479 GHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTY 538
           G ++ A  L  EM+ +G IP++V+Y+ +I+   + +  + A +L  +M   G  PD  TY
Sbjct: 427 GRMEDASGLLQEMIERGFIPDVVSYSTIISGFCRNQELEKAFQLKVEMVAKGISPDVATY 486

Query: 539 SIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQ 598
           S +++ L     L E   +F EM      PDE  Y  L++ +   G++ KA   ++ M+Q
Sbjct: 487 SSLIQGLCKQRRLGEVCDLFQEMLSLGLPPDEVTYTSLINAYCIEGDLDKALRLHDEMIQ 546

Query: 599 AGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCT--EARSP 656
            G  P++ T N L++ F +  +  +A  LL  +L     P+  TY  L+  C   E +S 
Sbjct: 547 KGFSPDIVTYNVLINGFNKQSRTKEAKRLLLKLLYEESVPNEITYNTLIDNCNNLEFKSA 606

Query: 657 YDM--GFC 662
             +  GFC
Sbjct: 607 LALMKGFC 614



 Score =  144 bits (364), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 94/304 (30%), Positives = 152/304 (50%), Gaps = 2/304 (0%)

Query: 347 FNWLRRQA--GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHS 404
           F  LR  A  G   +  +Y  ++  L R  Q    +++L++M +    P+ VT+N LI+ 
Sbjct: 258 FKLLRLMALKGLNPNLISYNVVINGLCREGQMKETSEILEEMSKRRYVPDRVTFNTLING 317

Query: 405 YGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPD 464
           Y      ++AL +  +M   G  P+ VTY TLI+   KAG L+ AM+   +M+  GL P+
Sbjct: 318 YCNVGNFHQALVLHAEMVKNGLSPNVVTYTTLINSMCKAGNLNRAMEFLDQMRDRGLHPN 377

Query: 465 TFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYR 524
             TY+ +I+   + G L+ A+Q+  EMV  G  P ++TYN +I         + A  L +
Sbjct: 378 GRTYTTLIDGFSQQGFLKQAYQIMKEMVENGFTPTIITYNALINGHCILGRMEDASGLLQ 437

Query: 525 DMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAG 584
           +M   GF PD V+YS ++        L++A  +  EM  K   PD   Y  L+    K  
Sbjct: 438 EMIERGFIPDVVSYSTIISGFCRNQELEKAFQLKVEMVAKGISPDVATYSSLIQGLCKQR 497

Query: 585 NVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYT 644
            + +  + ++ ML  GL P+  T  SL++A+   G L  A  L   M+  G  P + TY 
Sbjct: 498 RLGEVCDLFQEMLSLGLPPDEVTYTSLINAYCIEGDLDKALRLHDEMIQKGFSPDIVTYN 557

Query: 645 LLLS 648
           +L++
Sbjct: 558 VLIN 561



 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 82/278 (29%), Positives = 137/278 (49%), Gaps = 24/278 (8%)

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
           + GF  D  +Y+T++    R ++     +L  +MV  G  P+V TY+ LI    +   L 
Sbjct: 441 ERGFIPDVVSYSTIISGFCRNQELEKAFQLKVEMVAKGISPDVATYSSLIQGLCKQRRLG 500

Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
           E  D+F++M  +G  PD VTY +LI+ +   G LD A+ ++ +M   G SPD  TY+V+I
Sbjct: 501 EVCDLFQEMLSLGLPPDEVTYTSLINAYCIEGDLDKALRLHDEMIQKGFSPDIVTYNVLI 560

Query: 473 NCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFE 532
           N   K    + A +L  +++ +  +PN +TYN +I        ++SAL L +        
Sbjct: 561 NGFNKQSRTKEAKRLLLKLLYEESVPNEITYNTLID-NCNNLEFKSALALMK-------- 611

Query: 533 PDKVTYSIVMEVLGHC--GYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAW 590
                        G C  G ++EA+ V   M +K +  +E VY +++    K GN+ KA+
Sbjct: 612 -------------GFCMKGLMNEADRVLESMLQKGYKLNEEVYNVIIHGHSKVGNIEKAY 658

Query: 591 EWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLL 628
             Y+ ML +G  P+  T  +L  +    G+  +   LL
Sbjct: 659 NLYKEMLHSGFAPHSVTIMALAKSLYHEGKEVELNQLL 696



 Score =  129 bits (324), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 94/317 (29%), Positives = 154/317 (48%), Gaps = 28/317 (8%)

Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMV------GILGRARQFGAINKLLDQMVRDGCQPNVV 396
           A+ F + +R + G   +  TYTT++      G L +A Q      ++ +MV +G  P ++
Sbjct: 362 AMEFLDQMRDR-GLHPNGRTYTTLIDGFSQQGFLKQAYQ------IMKEMVENGFTPTII 414

Query: 397 TYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKM 456
           TYN LI+ +     + +A  + ++M   G  PD V+Y T+I    +   L+ A  +  +M
Sbjct: 415 TYNALINGHCILGRMEDASGLLQEMIERGFIPDVVSYSTIISGFCRNQELEKAFQLKVEM 474

Query: 457 QAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNY 516
            A G+SPD  TYS +I  L K   L     LF EM++ G  P+ VTY  +I       + 
Sbjct: 475 VAKGISPDVATYSSLIQGLCKQRRLGEVCDLFQEMLSLGLPPDEVTYTSLINAYCIEGDL 534

Query: 517 QSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLL 576
             AL+L+ +M   GF PD VTY++++          EA+ +  ++  +  VP+E  Y  L
Sbjct: 535 DKALRLHDEMIQKGFSPDIVTYNVLINGFNKQSRTKEAKRLLLKLLYEESVPNEITYNTL 594

Query: 577 VD----LWGKA-----------GNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQL 621
           +D    L  K+           G + +A    E+MLQ G + N    N ++    +VG +
Sbjct: 595 IDNCNNLEFKSALALMKGFCMKGLMNEADRVLESMLQKGYKLNEEVYNVIIHGHSKVGNI 654

Query: 622 SDAYHLLQGMLNLGLKP 638
             AY+L + ML+ G  P
Sbjct: 655 EKAYNLYKEMLHSGFAP 671



 Score =  105 bits (261), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 82/357 (22%), Positives = 150/357 (42%), Gaps = 61/357 (17%)

Query: 330 ANQVLKQLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRD 389
           +N +LK   D ++ L F +W R Q  F          + IL R + +     L +++V  
Sbjct: 51  SNLLLKSQFDSSLVLKFLDWARSQQFFSF--QCKCLALHILTRYKLYKTAQSLAEEVV-- 106

Query: 390 GCQPNVVTYNRLIHSYGRANYLNE-ALDVFKQMQ--VVGCEPDRVTYCTLIDIHAKAGFL 446
                              N ++E   D+F+ ++     C+     +  ++   A+   +
Sbjct: 107 ------------------VNTVDETGEDLFQCLKNSYYQCKSSSAVFDLVVKSCARVNLI 148

Query: 447 DVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGH-LQAAHQLFCEMVNQGCIPNLVTYNI 505
           + A+ +    ++ G  P   +Y+ I++ + +    ++ A  +F EMV  G  PN+ TYNI
Sbjct: 149 NKALSIVNLAKSYGFMPGVLSYNAILDAVIRTKQSVKIAEGIFKEMVESGVSPNVYTYNI 208

Query: 506 MIA-----------------------------------LQAKARNYQSALKLYRDMQNAG 530
           +I                                       K R    A KL R M   G
Sbjct: 209 LIRGFCTAGNLEMGLFFFGEMERNGCLPNVVTYNTIIDAYCKLRKIGEAFKLLRLMALKG 268

Query: 531 FEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAW 590
             P+ ++Y++V+  L   G + E   +  EM ++ +VPD   +  L++ +   GN  +A 
Sbjct: 269 LNPNLISYNVVINGLCREGQMKETSEILEEMSKRRYVPDRVTFNTLINGYCNVGNFHQAL 328

Query: 591 EWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
             +  M++ GL PNV T  +L+++  + G L+ A   L  M + GL P+ +TYT L+
Sbjct: 329 VLHAEMVKNGLSPNVVTYTTLINSMCKAGNLNRAMEFLDQMRDRGLHPNGRTYTTLI 385



 Score = 60.5 bits (145), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 45/196 (22%), Positives = 82/196 (41%), Gaps = 15/196 (7%)

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANY-- 410
           Q GF  D  TY  ++    +  +     +LL +++ +   PN +TYN LI +     +  
Sbjct: 546 QKGFSPDIVTYNVLINGFNKQSRTKEAKRLLLKLLYEESVPNEITYNTLIDNCNNLEFKS 605

Query: 411 -------------LNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQ 457
                        +NEA  V + M   G + +   Y  +I  H+K G ++ A ++YK+M 
Sbjct: 606 ALALMKGFCMKGLMNEADRVLESMLQKGYKLNEEVYNVIIHGHSKVGNIEKAYNLYKEML 665

Query: 458 AAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQ 517
            +G +P + T   +   L   G     +QL    +    I       ++I + +K  N  
Sbjct: 666 HSGFAPHSVTIMALAKSLYHEGKEVELNQLLDYTLKSCRITEAALAKVLIGINSKEGNMD 725

Query: 518 SALKLYRDMQNAGFEP 533
           +   + +DM  +G  P
Sbjct: 726 AVFNVLKDMALSGLLP 741


>gi|449522636|ref|XP_004168332.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g09680-like [Cucumis sativus]
          Length = 590

 Score =  158 bits (400), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 91/302 (30%), Positives = 156/302 (51%), Gaps = 1/302 (0%)

Query: 346 FFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSY 405
            FN +R++ G +    ++ T++  L ++R      +L   M  +   P+V TY+ LIH  
Sbjct: 245 IFNEIRKR-GLRPTTVSFNTLINGLCKSRNLDEGFRLKKTMEENRIYPDVFTYSVLIHGL 303

Query: 406 GRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDT 465
            +   L+ A  +F +MQ  G  P+ +T+  LID   ++  +D AM+ Y +M   G+ PD 
Sbjct: 304 CKEGRLDVAEQLFDEMQQRGLRPNGITFTALIDGQYRSRRMDSAMNTYHQMLTMGVKPDL 363

Query: 466 FTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRD 525
             Y+ ++N L K G +  A +L  EM   G  P+ +TY  +I    K  + +SA+++ + 
Sbjct: 364 VMYNTLLNGLCKVGDVNKARKLVDEMKMVGMKPDKITYTTLIDGYCKEGDLESAMEIRKG 423

Query: 526 MQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGN 585
           M   G   D V ++ ++      G + +AE    EM      PD+  Y +++D + K GN
Sbjct: 424 MNEEGVVLDNVAFTALISGFCRDGRVRDAERTLREMVEAGMKPDDATYTMVIDGYCKKGN 483

Query: 586 VRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTL 645
           V+  ++  + M   G +P V T N L++   + GQ+ +A  LL+ MLNLG+ P   TY +
Sbjct: 484 VKMGFKLLKEMQINGHKPGVITYNVLMNGLCKQGQMKNANMLLEAMLNLGVTPDDITYNI 543

Query: 646 LL 647
           LL
Sbjct: 544 LL 545



 Score =  150 bits (378), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 96/318 (30%), Positives = 161/318 (50%), Gaps = 2/318 (0%)

Query: 385 QMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAG 444
           +++  G  P V  YN LI+ + +   + +A  +F +++  G  P  V++ TLI+   K+ 
Sbjct: 213 EILEYGFPPKVQYYNILINKFCKEGSIRDAKLIFNEIRKRGLRPTTVSFNTLINGLCKSR 272

Query: 445 FLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYN 504
            LD    + K M+   + PD FTYSV+I+ L K G L  A QLF EM  +G  PN +T+ 
Sbjct: 273 NLDEGFRLKKTMEENRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRGLRPNGITFT 332

Query: 505 IMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRK 564
            +I  Q ++R   SA+  Y  M   G +PD V Y+ ++  L   G +++A  +  EM+  
Sbjct: 333 ALIDGQYRSRRMDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNKARKLVDEMKMV 392

Query: 565 NWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDA 624
              PD+  Y  L+D + K G++  A E  + M + G+  +     +L+S F R G++ DA
Sbjct: 393 GMKPDKITYTTLIDGYCKEGDLESAMEIRKGMNEEGVVLDNVAFTALISGFCRDGRVRDA 452

Query: 625 YHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGF-CHELMAVSGHPAHMFLLSMPSP 683
              L+ M+  G+KP   TYT+++    + +    MGF   + M ++GH   +   ++   
Sbjct: 453 ERTLREMVEAGMKPDDATYTMVIDGYCK-KGNVKMGFKLLKEMQINGHKPGVITYNVLMN 511

Query: 684 GPDGQNVRDHVGSFLEMM 701
           G   Q    +    LE M
Sbjct: 512 GLCKQGQMKNANMLLEAM 529



 Score =  123 bits (309), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 75/264 (28%), Positives = 136/264 (51%), Gaps = 3/264 (1%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           +Q G + +  T+T ++    R+R+  +      QM+  G +P++V YN L++   +   +
Sbjct: 320 QQRGLRPNGITFTALIDGQYRSRRMDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDV 379

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
           N+A  +  +M++VG +PD++TY TLID + K G L+ AM++ K M   G+  D   ++ +
Sbjct: 380 NKARKLVDEMKMVGMKPDKITYTTLIDGYCKEGDLESAMEIRKGMNEEGVVLDNVAFTAL 439

Query: 472 INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF 531
           I+   + G ++ A +   EMV  G  P+  TY ++I    K  N +   KL ++MQ  G 
Sbjct: 440 ISGFCRDGRVRDAERTLREMVEAGMKPDDATYTMVIDGYCKKGNVKMGFKLLKEMQINGH 499

Query: 532 EPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWE 591
           +P  +TY+++M  L   G +  A  +   M      PD+  Y +L++   K G   KA +
Sbjct: 500 KPGVITYNVLMNGLCKQGQMKNANMLLEAMLNLGVTPDDITYNILLEGHCKNG---KAED 556

Query: 592 WYEAMLQAGLRPNVPTCNSLLSAF 615
             +   + GL  +     SL+S +
Sbjct: 557 LLKLRNEKGLIVDYAYYTSLVSEY 580



 Score = 47.4 bits (111), Expect = 0.031,   Method: Compositional matrix adjust.
 Identities = 53/294 (18%), Positives = 112/294 (38%), Gaps = 15/294 (5%)

Query: 526 MQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGN 585
           +  AG       +  +M      G++ +A   F  +R  N+       G L+D    + +
Sbjct: 144 LDTAGTRCSNFVFDALMIAYWDSGFVSDAIQCFRLVRNSNFQIPFHGCGYLLDKMINSNS 203

Query: 586 VRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTL 645
               W +Y  +L+ G  P V   N L++ F + G + DA  +   +   GL+P+  ++  
Sbjct: 204 PVTIWTFYSEILEYGFPPKVQYYNILINKFCKEGSIRDAKLIFNEIRKRGLRPTTVSFNT 263

Query: 646 LLSCCTEARSPYDMGF-CHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSE 704
           L++   ++R+  D GF   + M  +     +F  S+   G   +   D      + M   
Sbjct: 264 LINGLCKSRN-LDEGFRLKKTMEENRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQR 322

Query: 705 DRESKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAVKEKGMSYWLINLHVMSDG 764
                     A++D  ++S   + A + +       V PD          L+  + + +G
Sbjct: 323 GLRPNGITFTALIDGQYRSRRMDSAMNTYHQMLTMGVKPD----------LVMYNTLLNG 372

Query: 765 TAVIALSRTLAWFRKQMLISGVGPSRI---DIVTGWGRRSRVTGTSLVRQAVQE 815
              +           +M + G+ P +I    ++ G+ +   +     +R+ + E
Sbjct: 373 LCKVGDVNKARKLVDEMKMVGMKPDKITYTTLIDGYCKEGDLESAMEIRKGMNE 426


>gi|449503427|ref|XP_004161997.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g71060, mitochondrial-like [Cucumis sativus]
          Length = 542

 Score =  158 bits (400), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 96/373 (25%), Positives = 183/373 (49%), Gaps = 4/373 (1%)

Query: 332 QVLKQLQDH-TVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDG 390
           +VLK+L +   +AL FF W  +Q GFKH   +Y  ++  LG+ +QF  I  L+  M R G
Sbjct: 127 EVLKKLSNAGFLALSFFRWAEKQKGFKHTTESYNLLIEALGKIKQFNVIWNLVSDMKRKG 186

Query: 391 CQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAM 450
                 T+  +   Y RA  + EA++ F++M+  G +     +  L+D   K+  +  A 
Sbjct: 187 ILSRE-TFALITRRYARARKVKEAVESFEKMEKFGFQMGVSDFNRLLDTLCKSRNVKKAQ 245

Query: 451 DMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQ 510
           +++ KM+     PD  +Y++++   G+  +L   ++++ EM ++G  P++VT+ I+I   
Sbjct: 246 EVFDKMKHGRFKPDIKSYTILLEGWGQDQNLLKLNEVYREMRDEGFEPDVVTFGILINAH 305

Query: 511 AKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDE 570
            KAR Y  A++L+ +M+    +P    +  ++  LG    L EA   F +++   + P+ 
Sbjct: 306 CKARKYDEAIRLFHEMEAKNIKPSPHVFCTLINGLGSEKRLKEALEFFEQLKLSGFAPEA 365

Query: 571 PVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQG 630
           P Y  +V  +  +  +  A+   + M ++G+ PN  T + +L   ++  +  +AY + Q 
Sbjct: 366 PTYNAVVGAYCWSMKMAYAYRMVDEMRKSGVGPNSRTYDIILHHLIKGRKSKEAYSVFQR 425

Query: 631 M-LNLGLKPSLQTYTLLLSC-CTEARSPYDMGFCHELMAVSGHPAHMFLLSMPSPGPDGQ 688
           M    G +P+L TY +++   C E R    +    E+ A    P      ++ +      
Sbjct: 426 MSREPGCEPTLSTYDIMIRMFCNEERVDMAIQIWDEMKAKGVLPGMHLFSTLINSLCHEH 485

Query: 689 NVRDHVGSFLEMM 701
            + D    F EM+
Sbjct: 486 KLEDACTYFQEML 498



 Score =  123 bits (308), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 83/356 (23%), Positives = 175/356 (49%), Gaps = 10/356 (2%)

Query: 284 LAPFSRHFASTGNVVESVSRILRQWKWGPLAEEALGNTNYSMDAYQANQVLKQLQDHTVA 343
            A  +R +A    V E+V    +  K+G   +  + + N  +D    ++ +K+ Q+    
Sbjct: 193 FALITRRYARARKVKEAVESFEKMEKFG--FQMGVSDFNRLLDTLCKSRNVKKAQE---- 246

Query: 344 LGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIH 403
              F+ ++    FK D  +YT ++   G+ +    +N++  +M  +G +P+VVT+  LI+
Sbjct: 247 --VFDKMK-HGRFKPDIKSYTILLEGWGQDQNLLKLNEVYREMRDEGFEPDVVTFGILIN 303

Query: 404 SYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSP 463
           ++ +A   +EA+ +F +M+    +P    +CTLI+       L  A++ +++++ +G +P
Sbjct: 304 AHCKARKYDEAIRLFHEMEAKNIKPSPHVFCTLINGLGSEKRLKEALEFFEQLKLSGFAP 363

Query: 464 DTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLY 523
           +  TY+ ++     +  +  A+++  EM   G  PN  TY+I++    K R  + A  ++
Sbjct: 364 EAPTYNAVVGAYCWSMKMAYAYRMVDEMRKSGVGPNSRTYDIILHHLIKGRKSKEAYSVF 423

Query: 524 RDM-QNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGK 582
           + M +  G EP   TY I++ +  +   +D A  ++ EM+ K  +P   ++  L++    
Sbjct: 424 QRMSREPGCEPTLSTYDIMIRMFCNEERVDMAIQIWDEMKAKGVLPGMHLFSTLINSLCH 483

Query: 583 AGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKP 638
              +  A  +++ ML  G+RP     ++L  A L  G+   A  + + +  L   P
Sbjct: 484 EHKLEDACTYFQEMLDVGIRPPATMFSNLKQALLDDGRKDTALLMAEKIXKLRKAP 539


>gi|334184106|ref|NP_178323.3| tetratricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|218546751|sp|P0C894.1|PP143_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At2g02150
 gi|330250459|gb|AEC05553.1| tetratricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 761

 Score =  158 bits (400), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 104/333 (31%), Positives = 162/333 (48%), Gaps = 16/333 (4%)

Query: 332 QVLKQL-QDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMV--- 387
           +VL +L +D  +A  FF W   + GFKH   +Y  +  IL  AR +   N +L +MV   
Sbjct: 113 RVLVELKEDPKLAFKFFKWSMTRNGFKHSVESYCIVAHILFCARMYYDANSVLKEMVLSK 172

Query: 388 ------------RDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCT 435
                       R+ C P    ++ L         L EA+  F +M+     P   +   
Sbjct: 173 ADCDVFDVLWSTRNVCVPGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNG 232

Query: 436 LIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQG 495
           L+   AK G  D     +K M  AG  P  FTY+++I+C+ K G ++AA  LF EM  +G
Sbjct: 233 LLHRFAKLGKTDDVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRG 292

Query: 496 CIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAE 555
            +P+ VTYN MI    K       +  + +M++   EPD +TY+ ++      G L    
Sbjct: 293 LVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGL 352

Query: 556 AVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAF 615
             + EM+     P+   Y  LVD + K G +++A ++Y  M + GL PN  T  SL+ A 
Sbjct: 353 EFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDAN 412

Query: 616 LRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
            ++G LSDA+ L   ML +G++ ++ TYT L+ 
Sbjct: 413 CKIGNLSDAFRLGNEMLQVGVEWNVVTYTALID 445



 Score =  152 bits (384), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 97/392 (24%), Positives = 185/392 (47%), Gaps = 1/392 (0%)

Query: 354 AGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNE 413
           AG +    TY  M+  + +     A   L ++M   G  P+ VTYN +I  +G+   L++
Sbjct: 256 AGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDD 315

Query: 414 ALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIIN 473
            +  F++M+ + CEPD +TY  LI+   K G L + ++ Y++M+  GL P+  +YS +++
Sbjct: 316 TVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVD 375

Query: 474 CLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEP 533
              K G +Q A + + +M   G +PN  TY  +I    K  N   A +L  +M   G E 
Sbjct: 376 AFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEW 435

Query: 534 DKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWY 593
           + VTY+ +++ L     + EAE +F +M     +P+   Y  L+  + KA N+ +A E  
Sbjct: 436 NVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELL 495

Query: 594 EAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEA 653
             +   G++P++    + +     + ++  A  ++  M   G+K +   YT L+    ++
Sbjct: 496 NELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKS 555

Query: 654 RSPYD-MGFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRESKRGL 712
            +P + +    E+  +      +    +       + V   V  F  + +    ++   +
Sbjct: 556 GNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAI 615

Query: 713 VDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPD 744
             A++D L K    E A +++E   QK + PD
Sbjct: 616 FTAMIDGLCKDNQVEAATTLFEQMVQKGLVPD 647



 Score =  138 bits (348), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 85/288 (29%), Positives = 143/288 (49%), Gaps = 4/288 (1%)

Query: 368 GILGRARQFGA---INKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVV 424
           G+L R  + G    + +    M+  G +P V TYN +I    +   +  A  +F++M+  
Sbjct: 232 GLLHRFAKLGKTDDVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFR 291

Query: 425 GCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAA 484
           G  PD VTY ++ID   K G LD  +  +++M+     PD  TY+ +INC  K G L   
Sbjct: 292 GLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIG 351

Query: 485 HQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEV 544
            + + EM   G  PN+V+Y+ ++    K    Q A+K Y DM+  G  P++ TY+ +++ 
Sbjct: 352 LEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDA 411

Query: 545 LGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPN 604
               G L +A  +  EM +     +   Y  L+D    A  +++A E +  M  AG+ PN
Sbjct: 412 NCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPN 471

Query: 605 VPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTY-TLLLSCCT 651
           + + N+L+  F++   +  A  LL  +   G+KP L  Y T +   C+
Sbjct: 472 LASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCS 519



 Score =  110 bits (274), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 90/360 (25%), Positives = 163/360 (45%), Gaps = 13/360 (3%)

Query: 325 MDAYQANQVLKQLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLD 384
           +DA+    +++Q      A+ F+  +RR  G   +E+TYT+++    +        +L +
Sbjct: 374 VDAFCKEGMMQQ------AIKFYVDMRR-VGLVPNEYTYTSLIDANCKIGNLSDAFRLGN 426

Query: 385 QMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAG 444
           +M++ G + NVVTY  LI     A  + EA ++F +M   G  P+  +Y  LI    KA 
Sbjct: 427 EMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAK 486

Query: 445 FLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYN 504
            +D A+++  +++  G+ PD   Y   I  L     ++AA  +  EM   G   N + Y 
Sbjct: 487 NMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYT 546

Query: 505 IMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRK 564
            ++    K+ N    L L  +M+    E   VT+ ++++ L     + +A   F  +   
Sbjct: 547 TLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISND 606

Query: 565 NWV-PDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSD 623
             +  +  ++  ++D   K   V  A   +E M+Q GL P+     SL+    + G + +
Sbjct: 607 FGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLE 666

Query: 624 AYHLLQGMLNLGLKPSLQTYTLL---LSCCTEARSPYDMGFCHELMAVSGHPAHMFLLSM 680
           A  L   M  +G+K  L  YT L   LS C + +      F  E++    HP  +  +S+
Sbjct: 667 ALALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKA--RSFLEEMIGEGIHPDEVLCISV 724



 Score = 59.3 bits (142), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 48/204 (23%), Positives = 92/204 (45%), Gaps = 1/204 (0%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           ++ G K +   YTT++    ++        LLD+M     +  VVT+  LI    +   +
Sbjct: 534 KECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLV 593

Query: 412 NEALDVFKQM-QVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSV 470
           ++A+D F ++    G + +   +  +ID   K   ++ A  ++++M   GL PD   Y+ 
Sbjct: 594 SKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTS 653

Query: 471 IINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAG 530
           +++   K G++  A  L  +M   G   +L+ Y  ++   +     Q A     +M   G
Sbjct: 654 LMDGNFKQGNVLEALALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEG 713

Query: 531 FEPDKVTYSIVMEVLGHCGYLDEA 554
             PD+V    V++     G +DEA
Sbjct: 714 IHPDEVLCISVLKKHYELGCIDEA 737



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 43/167 (25%), Positives = 75/167 (44%), Gaps = 10/167 (5%)

Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLI 402
           A+ +FN +    G + +   +T M+  L +  Q  A   L +QMV+ G  P+   Y  L+
Sbjct: 596 AVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLM 655

Query: 403 HSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLS 462
               +   + EAL +  +M  +G + D + Y +L+   +    L  A    ++M   G+ 
Sbjct: 656 DGNFKQGNVLEALALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIH 715

Query: 463 PD-TFTYSVI-----INCLGKAGHLQA---AHQLFCEMVNQGCIPNL 500
           PD     SV+     + C+ +A  LQ+    HQL     N   +PN+
Sbjct: 716 PDEVLCISVLKKHYELGCIDEAVELQSYLMKHQLLTS-DNDNALPNM 761


>gi|11994279|dbj|BAB01462.1| unnamed protein product [Arabidopsis thaliana]
          Length = 648

 Score =  158 bits (400), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 93/305 (30%), Positives = 161/305 (52%), Gaps = 1/305 (0%)

Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLI 402
           AL  FN +  + G K D  TY++++G L    ++    K+L +M+     P+VVT++ LI
Sbjct: 293 ALSLFNEMEMK-GIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALI 351

Query: 403 HSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLS 462
             + +   L EA +++ +M   G  PD +TY +LID   K   L  A  M+  M + G  
Sbjct: 352 DVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCE 411

Query: 463 PDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKL 522
           PD  TYS++IN   KA  +    +LF E+ ++G IPN +TYN ++    ++    +A +L
Sbjct: 412 PDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKEL 471

Query: 523 YRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGK 582
           +++M + G  P  VTY I+++ L   G L++A  +F +M++        +Y +++     
Sbjct: 472 FQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCN 531

Query: 583 AGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQT 642
           A  V  AW  + ++   G++P+V T N ++    + G LS+A  L + M   G  P   T
Sbjct: 532 ASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFT 591

Query: 643 YTLLL 647
           Y +L+
Sbjct: 592 YNILI 596



 Score =  153 bits (387), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 105/374 (28%), Positives = 183/374 (48%), Gaps = 21/374 (5%)

Query: 295 GNVVESVSRILRQWKWGPLAEEALGNTNYSMDAYQANQVLKQL---QDHTVALGFFNWLR 351
           G V E++  I R  ++G           +  D      VL +L    +  +AL  F  + 
Sbjct: 218 GRVSEALVLIDRMVEYG-----------FQPDEVTYGPVLNRLCKSGNSALALDLFRKME 266

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
            +   K     Y+ ++  L +   F     L ++M   G + +VVTY+ LI         
Sbjct: 267 ER-NIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKW 325

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
           ++   + ++M      PD VT+  LID+  K G L  A ++Y +M   G++PDT TY+ +
Sbjct: 326 DDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSL 385

Query: 472 INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF 531
           I+   K   L  A+Q+F  MV++GC P++VTY+I+I    KA+     ++L+R++ + G 
Sbjct: 386 IDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGL 445

Query: 532 EPDKVTYSIVMEVLGHC--GYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKA 589
            P+ +TY+ +  VLG C  G L+ A+ +F EM  +   P    YG+L+D     G + KA
Sbjct: 446 IPNTITYNTL--VLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKA 503

Query: 590 WEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS- 648
            E +E M ++ +   +   N ++       ++ DA+ L   + + G+KP + TY +++  
Sbjct: 504 LEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGG 563

Query: 649 -CCTEARSPYDMGF 661
            C   + S  DM F
Sbjct: 564 LCKKGSLSEADMLF 577



 Score =  145 bits (367), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 89/321 (27%), Positives = 166/321 (51%), Gaps = 1/321 (0%)

Query: 338 QDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVT 397
           + + + LGF   +    G +HD +T T M+    R ++      +L +  + G +P+ +T
Sbjct: 113 KQYDLVLGFCKGMELN-GIEHDMYTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTIT 171

Query: 398 YNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQ 457
           ++ L++ +     ++EA+ +  +M  +   PD VT  TLI+     G +  A+ +  +M 
Sbjct: 172 FSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMV 231

Query: 458 AAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQ 517
             G  PD  TY  ++N L K+G+   A  LF +M  +    ++V Y+I+I    K  ++ 
Sbjct: 232 EYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFD 291

Query: 518 SALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLV 577
            AL L+ +M+  G + D VTYS ++  L + G  D+   +  EM  +N +PD   +  L+
Sbjct: 292 DALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALI 351

Query: 578 DLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLK 637
           D++ K G + +A E Y  M+  G+ P+  T NSL+  F +   L +A  +   M++ G +
Sbjct: 352 DVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCE 411

Query: 638 PSLQTYTLLLSCCTEARSPYD 658
           P + TY++L++   +A+   D
Sbjct: 412 PDIVTYSILINSYCKAKRVDD 432



 Score =  142 bits (357), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 82/296 (27%), Positives = 153/296 (51%)

Query: 359 DEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVF 418
           D  T++ ++ +  +  +     +L ++M+  G  P+ +TYN LI  + + N L+EA  +F
Sbjct: 343 DVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMF 402

Query: 419 KQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKA 478
             M   GCEPD VTY  LI+ + KA  +D  M +++++ + GL P+T TY+ ++    ++
Sbjct: 403 DLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQS 462

Query: 479 GHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTY 538
           G L AA +LF EMV++G  P++VTY I++           AL+++  MQ +        Y
Sbjct: 463 GKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIY 522

Query: 539 SIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQ 598
           +I++  + +   +D+A ++F  +  K   PD   Y +++    K G++ +A   +  M +
Sbjct: 523 NIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKE 582

Query: 599 AGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEAR 654
            G  P+  T N L+ A L    L  +  L++ M   G      T  +++   ++ R
Sbjct: 583 DGCTPDDFTYNILIRAHLGGSGLISSVELIEEMKVCGFSADSSTIKMVIDMLSDRR 638



 Score =  139 bits (350), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 104/404 (25%), Positives = 195/404 (48%), Gaps = 6/404 (1%)

Query: 347 FNWLRR--QAGFKHDEHTYTTMV-GILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIH 403
           F+ L R  + G++ D  T++T+V G     R   A+  L+D+MV    +P++VT + LI+
Sbjct: 154 FSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAV-ALVDRMVEMKQRPDLVTVSTLIN 212

Query: 404 SYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSP 463
                  ++EAL +  +M   G +PD VTY  +++   K+G   +A+D+++KM+   +  
Sbjct: 213 GLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKA 272

Query: 464 DTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLY 523
               YS++I+ L K G    A  LF EM  +G   ++VTY+ +I        +    K+ 
Sbjct: 273 SVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKML 332

Query: 524 RDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKA 583
           R+M      PD VT+S +++V    G L EA+ ++ EM  +   PD   Y  L+D + K 
Sbjct: 333 REMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKE 392

Query: 584 GNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTY 643
             + +A + ++ M+  G  P++ T + L++++ +  ++ D   L + + + GL P+  TY
Sbjct: 393 NCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITY 452

Query: 644 -TLLLSCCTEARSPYDMGFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMH 702
            TL+L  C   +         E+++  G P  +    +   G       +      E M 
Sbjct: 453 NTLVLGFCQSGKLNAAKELFQEMVS-RGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQ 511

Query: 703 SEDRESKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAV 746
                   G+ + ++  +  +   ++A S++   + K V PD V
Sbjct: 512 KSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVV 555



 Score = 63.9 bits (154), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 55/197 (27%), Positives = 91/197 (46%), Gaps = 37/197 (18%)

Query: 362 TYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQM 421
           TY T+V    ++ +  A  +L  +MV  G  P+VVTY  L+        LN+AL++F++M
Sbjct: 451 TYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKM 510

Query: 422 Q-------------VV----------------------GCEPDRVTYCTLIDIHAKAGFL 446
           Q             ++                      G +PD VTY  +I    K G L
Sbjct: 511 QKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSL 570

Query: 447 DVAMDMYKKMQAAGLSPDTFTYSVIINC-LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNI 505
             A  +++KM+  G +PD FTY+++I   LG +G L ++ +L  EM   G   +  T  +
Sbjct: 571 SEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSG-LISSVELIEEMKVCGFSADSSTIKM 629

Query: 506 MIALQAKARNYQSALKL 522
           +I + +  R  +S L +
Sbjct: 630 VIDMLSDRRLDKSFLDM 646



 Score = 49.7 bits (117), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 30/98 (30%), Positives = 48/98 (48%), Gaps = 4/98 (4%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           G K D  TY  M+G L +       + L  +M  DGC P+  TYN LI ++   + L  +
Sbjct: 549 GVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISS 608

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDI----HAKAGFLDV 448
           +++ ++M+V G   D  T   +ID+         FLD+
Sbjct: 609 VELIEEMKVCGFSADSSTIKMVIDMLSDRRLDKSFLDM 646


>gi|225447872|ref|XP_002269015.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
           mitochondrial-like [Vitis vinifera]
          Length = 656

 Score =  158 bits (400), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 93/313 (29%), Positives = 163/313 (52%), Gaps = 17/313 (5%)

Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMV------GILGRARQFGAINKLLDQMVRDGCQPNVV 396
           A G F+ +  + G   +  TY T++      G L RA  +       D+MV+ G  P+V 
Sbjct: 338 ASGLFDKMV-EIGLVPNAVTYNTLIDGYCNKGDLERAFSYR------DEMVKKGIMPSVS 390

Query: 397 TYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKM 456
           TYN L+H+      + EA D+ K+M+  G  PD +TY  LI+ +++ G    A D++ +M
Sbjct: 391 TYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKKAFDLHNEM 450

Query: 457 QAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNY 516
            + G+ P   TY+ +I  L +   ++ A  LF ++++QG  P+++ +N M+       N 
Sbjct: 451 LSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMVDGHCANGNV 510

Query: 517 QSALKLYRDMQNAGFEPDKVTYSIVMEVLGHC--GYLDEAEAVFAEMRRKNWVPDEPVYG 574
           + A  L ++M      PD+VT++ +M+  G C  G ++EA  +  EM+R+   PD   Y 
Sbjct: 511 ERAFMLLKEMDRKSVPPDEVTFNTLMQ--GRCREGKVEEARMLLDEMKRRGIKPDHISYN 568

Query: 575 LLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNL 634
            L+  +G+ G+++ A+   + ML  G  P + T N+L+    +  +   A  LL+ M+N 
Sbjct: 569 TLISGYGRRGDIKDAFRVRDEMLSIGFNPTLLTYNALIKCLCKNQEGDLAEELLKEMVNK 628

Query: 635 GLKPSLQTYTLLL 647
           G+ P   TY  L+
Sbjct: 629 GISPDDSTYLSLI 641



 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 91/300 (30%), Positives = 154/300 (51%), Gaps = 4/300 (1%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           R  G + D +TY +++  + +  +    + L D+MV  G  PN VTYN LI  Y     L
Sbjct: 311 RVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDL 370

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
             A     +M   G  P   TY  L+      G +  A DM K+M+  G+ PD  TY+++
Sbjct: 371 ERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNIL 430

Query: 472 INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF 531
           IN   + G+ + A  L  EM+++G  P  VTY  +I + ++    + A  L+  + + G 
Sbjct: 431 INGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGV 490

Query: 532 EPDKVTYSIVMEVLGHC--GYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKA 589
            PD + ++ +++  GHC  G ++ A  +  EM RK+  PDE  +  L+    + G V +A
Sbjct: 491 SPDVIMFNAMVD--GHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEA 548

Query: 590 WEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSC 649
               + M + G++P+  + N+L+S + R G + DA+ +   ML++G  P+L TY  L+ C
Sbjct: 549 RMLLDEMKRRGIKPDHISYNTLISGYGRRGDIKDAFRVRDEMLSIGFNPTLLTYNALIKC 608



 Score =  140 bits (352), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 93/378 (24%), Positives = 177/378 (46%), Gaps = 19/378 (5%)

Query: 349 WLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRA 408
           ++ ++ G      T   M+ +  +  +      L  +M R      V T+N +++   + 
Sbjct: 203 YMMKEKGIVPKIETCNDMLSLFLKLNRMEMAWVLYAEMFRLRISSTVYTFNIMVNVLCKE 262

Query: 409 NYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTY 468
             L +A +    M+ +G +P+ V+Y T+I  ++  G ++ A  +   M+  G+ PD++TY
Sbjct: 263 GKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTY 322

Query: 469 SVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQN 528
             +I+ + K G L+ A  LF +MV  G +PN VTYN +I       + + A     +M  
Sbjct: 323 GSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVK 382

Query: 529 AGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRK 588
            G  P   TY++++  L   G + EA+ +  EMR+K  +PD   Y +L++ + + GN +K
Sbjct: 383 KGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKK 442

Query: 589 AWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
           A++ +  ML  G+ P   T  SL+    R  ++ +A  L + +L+ G+ P +  +  ++ 
Sbjct: 443 AFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMVD 502

Query: 649 CCTEARSPYDMGFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRES 708
                      G C      +G+    F+L       D ++V     +F  +M    RE 
Sbjct: 503 -----------GHC-----ANGNVERAFMLLKEM---DRKSVPPDEVTFNTLMQGRCREG 543

Query: 709 KRGLVDAVVDFLHKSGLK 726
           K      ++D + + G+K
Sbjct: 544 KVEEARMLLDEMKRRGIK 561



 Score =  129 bits (325), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 109/465 (23%), Positives = 205/465 (44%), Gaps = 24/465 (5%)

Query: 396 VTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKK 455
           + ++ L+         +EA   F  M+  G  P   T   ++ +  K   +++A  +Y +
Sbjct: 180 IVFDLLVRVCCELRRADEAFKCFYMMKEKGIVPKIETCNDMLSLFLKLNRMEMAWVLYAE 239

Query: 456 MQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARN 515
           M    +S   +T+++++N L K G L+ A +    M   G  PN+V+YN +I   +   N
Sbjct: 240 MFRLRISSTVYTFNIMVNVLCKEGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGN 299

Query: 516 YQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGL 575
            + A ++   M+  G EPD  TY  ++  +   G L+EA  +F +M     VP+   Y  
Sbjct: 300 IEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNT 359

Query: 576 LVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLG 635
           L+D +   G++ +A+ + + M++ G+ P+V T N L+ A    G++ +A  +++ M   G
Sbjct: 360 LIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKG 419

Query: 636 LKPSLQTYTLLL---SCCTEARSPYDMGFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRD 692
           + P   TY +L+   S C  A+  +D+   +E+++    P H+   S+       +N   
Sbjct: 420 IIPDAITYNILINGYSRCGNAKKAFDLH--NEMLSKGIEPTHVTYTSLIYV-LSRRNRMK 476

Query: 693 HVGSFLEMMHSEDRESKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAVKEKGMS 752
                 E +  +       + +A+VD    +G  E A  + +   +K+V PD V      
Sbjct: 477 EADDLFEKILDQGVSPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPDEV------ 530

Query: 753 YWLINLHVMSDGTAVIALSRTLAWFRKQMLISGVGPSRID---IVTGWGRRSRVTGTSLV 809
                 + +  G               +M   G+ P  I    +++G+GRR  +     V
Sbjct: 531 ----TFNTLMQGRCREGKVEEARMLLDEMKRRGIKPDHISYNTLISGYGRRGDIKDAFRV 586

Query: 810 RQAVQELLHM-FSFPFFTENGNSGCFVGCGE-PLNKWLLQSYVDR 852
           R    E+L + F+    T N    C     E  L + LL+  V++
Sbjct: 587 R---DEMLSIGFNPTLLTYNALIKCLCKNQEGDLAEELLKEMVNK 628



 Score =  108 bits (270), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 62/230 (26%), Positives = 113/230 (49%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           R+ G   D  TY  ++    R         L ++M+  G +P  VTY  LI+   R N +
Sbjct: 416 RKKGIIPDAITYNILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRM 475

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
            EA D+F+++   G  PD + +  ++D H   G ++ A  + K+M    + PD  T++ +
Sbjct: 476 KEADDLFEKILDQGVSPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTL 535

Query: 472 INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF 531
           +    + G ++ A  L  EM  +G  P+ ++YN +I+   +  + + A ++  +M + GF
Sbjct: 536 MQGRCREGKVEEARMLLDEMKRRGIKPDHISYNTLISGYGRRGDIKDAFRVRDEMLSIGF 595

Query: 532 EPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWG 581
            P  +TY+ +++ L      D AE +  EM  K   PD+  Y  L++  G
Sbjct: 596 NPTLLTYNALIKCLCKNQEGDLAEELLKEMVNKGISPDDSTYLSLIEGMG 645



 Score =  104 bits (259), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 82/325 (25%), Positives = 149/325 (45%), Gaps = 10/325 (3%)

Query: 330 ANQVLKQLQDHTVALG--FFNWL---RRQAGFKHDEHTYTTMVGILGRARQFGAINKLLD 384
           A Q+LKQ+    +A     F+ L   R +   K     +  +V +    R+     K   
Sbjct: 145 ALQLLKQVMGTRIATNRELFDELTLSRDRLSVK-SSIVFDLLVRVCCELRRADEAFKCFY 203

Query: 385 QMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAG 444
            M   G  P + T N ++  + + N +  A  ++ +M  +       T+  ++++  K G
Sbjct: 204 MMKEKGIVPKIETCNDMLSLFLKLNRMEMAWVLYAEMFRLRISSTVYTFNIMVNVLCKEG 263

Query: 445 FLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYN 504
            L  A +    M+  G  P+  +Y+ II+     G+++ A ++   M  +G  P+  TY 
Sbjct: 264 KLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYG 323

Query: 505 IMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHC--GYLDEAEAVFAEMR 562
            +I+   K    + A  L+  M   G  P+ VTY+ +++  G+C  G L+ A +   EM 
Sbjct: 324 SLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLID--GYCNKGDLERAFSYRDEMV 381

Query: 563 RKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLS 622
           +K  +P    Y LLV      G + +A +  + M + G+ P+  T N L++ + R G   
Sbjct: 382 KKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAK 441

Query: 623 DAYHLLQGMLNLGLKPSLQTYTLLL 647
            A+ L   ML+ G++P+  TYT L+
Sbjct: 442 KAFDLHNEMLSKGIEPTHVTYTSLI 466



 Score =  100 bits (249), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 55/202 (27%), Positives = 105/202 (51%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           G +    TYT+++ +L R  +    + L ++++  G  P+V+ +N ++  +     +  A
Sbjct: 454 GIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMVDGHCANGNVERA 513

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
             + K+M      PD VT+ TL+    + G ++ A  +  +M+  G+ PD  +Y+ +I+ 
Sbjct: 514 FMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKRRGIKPDHISYNTLISG 573

Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPD 534
            G+ G ++ A ++  EM++ G  P L+TYN +I    K +    A +L ++M N G  PD
Sbjct: 574 YGRRGDIKDAFRVRDEMLSIGFNPTLLTYNALIKCLCKNQEGDLAEELLKEMVNKGISPD 633

Query: 535 KVTYSIVMEVLGHCGYLDEAEA 556
             TY  ++E +G+   L E  A
Sbjct: 634 DSTYLSLIEGMGNVDTLVEDNA 655



 Score = 72.4 bits (176), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 71/348 (20%), Positives = 133/348 (38%), Gaps = 60/348 (17%)

Query: 465 TFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYR 524
           +  + +++    +      A + F  M  +G +P + T N M++L  K    + A  LY 
Sbjct: 179 SIVFDLLVRVCCELRRADEAFKCFYMMKEKGIVPKIETCNDMLSLFLKLNRMEMAWVLYA 238

Query: 525 DMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAG 584
           +M          T++I++ VL   G L +A      M    + P+   Y  ++  +   G
Sbjct: 239 EMFRLRISSTVYTFNIMVNVLCKEGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRG 298

Query: 585 NVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYT 644
           N+  A    +AM   G+ P+  T  SL+S   + G+L +A  L   M+ +GL P+  TY 
Sbjct: 299 NIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYN 358

Query: 645 LLLSCCTEARSPYDMGFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSE 704
            L+            G+C++                              G         
Sbjct: 359 TLID-----------GYCNK------------------------------GDLERAFSYR 377

Query: 705 DRESKRGLVDAV------VDFLHKSGLKEEAGSVWEVAAQKNVYPDAVKEKGMSYWLINL 758
           D   K+G++ +V      V  L   G   EA  + +   +K + PDA          I  
Sbjct: 378 DEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDA----------ITY 427

Query: 759 HVMSDGTAVIALSRTLAWFRKQMLISGVGPSRI---DIVTGWGRRSRV 803
           +++ +G +    ++       +ML  G+ P+ +    ++    RR+R+
Sbjct: 428 NILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRM 475


>gi|15231338|ref|NP_187348.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75186627|sp|Q9M907.1|PP217_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g06920
 gi|6728999|gb|AAF26996.1|AC016827_7 hypothetical protein [Arabidopsis thaliana]
 gi|332640955|gb|AEE74476.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 871

 Score =  158 bits (400), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 108/391 (27%), Positives = 179/391 (45%), Gaps = 47/391 (12%)

Query: 301 VSRILRQWKWGPLAEEALGNTNYSMDAYQANQVLKQLQDHTVALGFFNWLRRQAGFKHDE 360
           V +++R++K+ P    A       + A+ A      +    + L  F  ++ + G++   
Sbjct: 155 VVQMMRKFKFRP----AFSAYTTLIGAFSA------VNHSDMMLTLFQQMQ-ELGYEPTV 203

Query: 361 HTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQ 420
           H +TT++    +  +  +   LLD+M       ++V YN  I S+G+   ++ A   F +
Sbjct: 204 HLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHE 263

Query: 421 MQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQ----------------------- 457
           ++  G +PD VTY ++I +  KA  LD A++M++ ++                       
Sbjct: 264 IEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGK 323

Query: 458 ------------AAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNI 505
                       A G  P    Y+ I+ CL K G +  A ++F EM  +   PNL TYNI
Sbjct: 324 FDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEM-KKDAAPNLSTYNI 382

Query: 506 MIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKN 565
           +I +  +A    +A +L   MQ AG  P+  T +I+++ L     LDEA A+F EM  K 
Sbjct: 383 LIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKV 442

Query: 566 WVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAY 625
             PDE  +  L+D  GK G V  A++ YE ML +  R N     SL+  F   G+  D +
Sbjct: 443 CTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGH 502

Query: 626 HLLQGMLNLGLKPSLQTYTLLLSCCTEARSP 656
            + + M+N    P LQ     + C  +A  P
Sbjct: 503 KIYKDMINQNCSPDLQLLNTYMDCMFKAGEP 533



 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 94/357 (26%), Positives = 167/357 (46%), Gaps = 1/357 (0%)

Query: 291 FASTGNVVESVSRILRQWKWGPLAEEALGNTNYSMDAYQANQVLKQLQDHTVALGFFNWL 350
           F      V  +  +L    WGP AE  L   ++         VL++L+D   A+ +F W 
Sbjct: 29  FEGNRQTVNDICNVLETGPWGPSAENTLSALSFKPQPEFVIGVLRRLKDVNRAIEYFRWY 88

Query: 351 RRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANY 410
            R+    H   +Y +++ ++ R R F A++++L +M   G  P+V T   ++    +AN 
Sbjct: 89  ERRTELPHCPESYNSLLLVMARCRNFDALDQILGEMSVAGFGPSVNTCIEMVLGCVKANK 148

Query: 411 LNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSV 470
           L E  DV + M+     P    Y TLI   +     D+ + ++++MQ  G  P    ++ 
Sbjct: 149 LREGYDVVQMMRKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTT 208

Query: 471 IINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAG 530
           +I    K G + +A  L  EM +     ++V YN+ I    K      A K + +++  G
Sbjct: 209 LIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANG 268

Query: 531 FEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAW 590
            +PD+VTY+ ++ VL     LDEA  +F  + +   VP    Y  ++  +G AG   +A+
Sbjct: 269 LKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAY 328

Query: 591 EWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
              E     G  P+V   N +L+   ++G++ +A  + + M      P+L TY +L+
Sbjct: 329 SLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEM-KKDAAPNLSTYNILI 384



 Score =  157 bits (398), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 91/296 (30%), Positives = 152/296 (51%)

Query: 359 DEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVF 418
           DE T+ +++  LG+  +     K+ ++M+   C+ N + Y  LI ++       +   ++
Sbjct: 446 DEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIY 505

Query: 419 KQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKA 478
           K M    C PD     T +D   KAG  +    M+++++A    PD  +YS++I+ L KA
Sbjct: 506 KDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKA 565

Query: 479 GHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTY 538
           G     ++LF  M  QGC+ +   YNI+I    K      A +L  +M+  GFEP  VTY
Sbjct: 566 GFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTY 625

Query: 539 SIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQ 598
             V++ L     LDEA  +F E + K    +  +Y  L+D +GK G + +A+   E ++Q
Sbjct: 626 GSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQ 685

Query: 599 AGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEAR 654
            GL PN+ T NSLL A ++  ++++A    Q M  L   P+  TY +L++   + R
Sbjct: 686 KGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVR 741



 Score =  155 bits (391), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 110/436 (25%), Positives = 193/436 (44%), Gaps = 49/436 (11%)

Query: 269 ERFSKPSREMKIPAGLA--PFSRHFASTGNVVESVSRILRQWKWGPLAEEALGNTNYSMD 326
           E F    +  ++P   A       + S G   E+ S + RQ   G +          S+ 
Sbjct: 294 EMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIP---------SVI 344

Query: 327 AYQAN-QVLKQLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQ 385
           AY      L+++     AL  F  +++ A    +  TY  ++ +L RA +     +L D 
Sbjct: 345 AYNCILTCLRKMGKVDEALKVFEEMKKDAA--PNLSTYNILIDMLCRAGKLDTAFELRDS 402

Query: 386 MVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGF 445
           M + G  PNV T N ++    ++  L+EA  +F++M    C PD +T+C+LID   K G 
Sbjct: 403 MQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGR 462

Query: 446 LDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNI 505
           +D A  +Y+KM  +    ++  Y+ +I      G  +  H+++ +M+NQ C P+L   N 
Sbjct: 463 VDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNT 522

Query: 506 MIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKN 565
            +    KA   +    ++ +++   F PD  +YSI++  L   G+ +E   +F  M+ + 
Sbjct: 523 YMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQG 582

Query: 566 WVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRP---------------------- 603
            V D   Y +++D + K G V KA++  E M   G  P                      
Sbjct: 583 CVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAY 642

Query: 604 -------------NVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCC 650
                        NV   +SL+  F +VG++ +AY +L+ ++  GL P+L T+  LL   
Sbjct: 643 MLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDAL 702

Query: 651 TEARSPYDMGFCHELM 666
            +A    +   C + M
Sbjct: 703 VKAEEINEALVCFQSM 718



 Score =  123 bits (309), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 71/264 (26%), Positives = 126/264 (47%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           ++ G   D   Y  ++    +  +     +LL++M   G +P VVTY  +I    + + L
Sbjct: 579 KEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRL 638

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
           +EA  +F++ +    E + V Y +LID   K G +D A  + +++   GL+P+ +T++ +
Sbjct: 639 DEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSL 698

Query: 472 INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF 531
           ++ L KA  +  A   F  M    C PN VTY I+I    K R +  A   +++MQ  G 
Sbjct: 699 LDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGM 758

Query: 532 EPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWE 591
           +P  ++Y+ ++  L   G + EA A+F   +    VPD   Y  +++          A+ 
Sbjct: 759 KPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEGLSNGNRAMDAFS 818

Query: 592 WYEAMLQAGLRPNVPTCNSLLSAF 615
            +E   + GL  +  TC  LL   
Sbjct: 819 LFEETRRRGLPIHNKTCVVLLDTL 842



 Score =  116 bits (290), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 74/292 (25%), Positives = 139/292 (47%)

Query: 356 FKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEAL 415
           F  D  +Y+ ++  L +A       +L   M   GC  +   YN +I  + +   +N+A 
Sbjct: 548 FVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAY 607

Query: 416 DVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCL 475
            + ++M+  G EP  VTY ++ID  AK   LD A  ++++ ++  +  +   YS +I+  
Sbjct: 608 QLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGF 667

Query: 476 GKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDK 535
           GK G +  A+ +  E++ +G  PNL T+N ++    KA     AL  ++ M+     P++
Sbjct: 668 GKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQ 727

Query: 536 VTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEA 595
           VTY I++  L      ++A   + EM+++   P    Y  ++    KAGN+ +A   ++ 
Sbjct: 728 VTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDR 787

Query: 596 MLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
               G  P+    N+++       +  DA+ L +     GL    +T  +LL
Sbjct: 788 FKANGGVPDSACYNAMIEGLSNGNRAMDAFSLFEETRRRGLPIHNKTCVVLL 839



 Score = 97.8 bits (242), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 55/200 (27%), Positives = 103/200 (51%)

Query: 363 YTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQ 422
           Y++++   G+  +      +L+++++ G  PN+ T+N L+ +  +A  +NEAL  F+ M+
Sbjct: 660 YSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMK 719

Query: 423 VVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQ 482
            + C P++VTY  LI+   K    + A   +++MQ  G+ P T +Y+ +I+ L KAG++ 
Sbjct: 720 ELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIA 779

Query: 483 AAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVM 542
            A  LF      G +P+   YN MI   +       A  L+ + +  G      T  +++
Sbjct: 780 EAGALFDRFKANGGVPDSACYNAMIEGLSNGNRAMDAFSLFEETRRRGLPIHNKTCVVLL 839

Query: 543 EVLGHCGYLDEAEAVFAEMR 562
           + L     L++A  V A +R
Sbjct: 840 DTLHKNDCLEQAAIVGAVLR 859



 Score = 39.3 bits (90), Expect = 9.9,   Method: Compositional matrix adjust.
 Identities = 29/116 (25%), Positives = 50/116 (43%), Gaps = 1/116 (0%)

Query: 334 LKQLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQP 393
           L +++    A  F+  +++Q G K    +YTTM+  L +A        L D+   +G  P
Sbjct: 737 LCKVRKFNKAFVFWQEMQKQ-GMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVP 795

Query: 394 NVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVA 449
           +   YN +I      N   +A  +F++ +  G      T   L+D   K   L+ A
Sbjct: 796 DSACYNAMIEGLSNGNRAMDAFSLFEETRRRGLPIHNKTCVVLLDTLHKNDCLEQA 851


>gi|15221515|ref|NP_176447.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75213223|sp|Q9SXD8.1|PPR90_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g62590
 gi|5454201|gb|AAD43616.1|AC005698_15 T3P18.15 [Arabidopsis thaliana]
 gi|332195860|gb|AEE33981.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 634

 Score =  158 bits (400), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 92/297 (30%), Positives = 156/297 (52%), Gaps = 4/297 (1%)

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
           + G++ D  T+TT++  L    +      L+D+MV+ GCQPN+VTY  +++   +    +
Sbjct: 183 EMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTD 242

Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
            AL++  +M+    E D V + T+ID   K   +D A++++K+M+  G+ P+  TYS +I
Sbjct: 243 LALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLI 302

Query: 473 NCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFE 532
           +CL   G    A QL  +M+ +   PNLVT+N +I    K   +  A KLY DM     +
Sbjct: 303 SCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSID 362

Query: 533 PDKVTYSIVMEVLGHCGY--LDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAW 590
           PD  TY+ ++   G C +  LD+A+ +F  M  K+  PD   Y  L+  + K+  V    
Sbjct: 363 PDIFTYNSLVN--GFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGT 420

Query: 591 EWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
           E +  M   GL  +  T  +L+      G   +A  + + M++ G+ P + TY++LL
Sbjct: 421 ELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILL 477



 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 99/350 (28%), Positives = 165/350 (47%), Gaps = 21/350 (6%)

Query: 339 DHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTY 398
           D  +AL   N +   A  + D   + T++  L + R       L  +M   G +PNVVTY
Sbjct: 240 DTDLALNLLNKME-AAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTY 298

Query: 399 NRLIH---SYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKK 455
           + LI    SYGR    ++A  +   M      P+ VT+  LID   K G    A  +Y  
Sbjct: 299 SSLISCLCSYGR---WSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDD 355

Query: 456 MQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARN 515
           M    + PD FTY+ ++N       L  A Q+F  MV++ C P++VTYN +I    K++ 
Sbjct: 356 MIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKR 415

Query: 516 YQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGL 575
            +   +L+R+M + G   D VTY+ +++ L H G  D A+ VF +M      PD   Y +
Sbjct: 416 VEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSI 475

Query: 576 LVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLG 635
           L+D     G + KA E ++ M ++ ++ ++    +++    + G++ D + L   +   G
Sbjct: 476 LLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKG 535

Query: 636 LKPSLQTYTLLLSCCTEARSPYDMGFCHELMAVSGHPAHMFLLSMPSPGP 685
           +KP++ TY  ++S           G C + +      A+  L  M   GP
Sbjct: 536 VKPNVVTYNTMIS-----------GLCSKRLL---QEAYALLKKMKEDGP 571



 Score =  140 bits (352), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 100/393 (25%), Positives = 185/393 (47%), Gaps = 12/393 (3%)

Query: 382 LLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHA 441
           L+DQMV  G +P+ +T+  LIH     N  +EA+ +  +M   GC+P+ VTY  +++   
Sbjct: 177 LVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLC 236

Query: 442 KAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLV 501
           K G  D+A+++  KM+AA +  D   ++ II+ L K  H+  A  LF EM  +G  PN+V
Sbjct: 237 KRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVV 296

Query: 502 TYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEM 561
           TY+ +I+       +  A +L  DM      P+ VT++ +++     G   EAE ++ +M
Sbjct: 297 TYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDM 356

Query: 562 RRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQL 621
            +++  PD   Y  LV+ +     + KA + +E M+     P+V T N+L+  F +  ++
Sbjct: 357 IKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRV 416

Query: 622 SDAYHLLQGMLNLGLKPSLQTYTLLLSC------CTEARSPYDMGFCHELMAVSGHPAHM 675
            D   L + M + GL     TYT L+        C  A+  +      + M   G P  +
Sbjct: 417 EDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVF------KQMVSDGVPPDI 470

Query: 676 FLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRESKRGLVDAVVDFLHKSGLKEEAGSVWEV 735
              S+   G       +      + M   + +    +   +++ + K+G  ++   ++  
Sbjct: 471 MTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCS 530

Query: 736 AAQKNVYPDAVKEKGMSYWLINLHVMSDGTAVI 768
            + K V P+ V    M   L +  ++ +  A++
Sbjct: 531 LSLKGVKPNVVTYNTMISGLCSKRLLQEAYALL 563



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 87/305 (28%), Positives = 157/305 (51%), Gaps = 1/305 (0%)

Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLI 402
           AL  F  +  + G + +  TY++++  L    ++   ++LL  M+     PN+VT+N LI
Sbjct: 279 ALNLFKEMETK-GIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALI 337

Query: 403 HSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLS 462
            ++ +     EA  ++  M     +PD  TY +L++       LD A  M++ M +    
Sbjct: 338 DAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCF 397

Query: 463 PDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKL 522
           PD  TY+ +I    K+  ++   +LF EM ++G + + VTY  +I       +  +A K+
Sbjct: 398 PDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKV 457

Query: 523 YRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGK 582
           ++ M + G  PD +TYSI+++ L + G L++A  VF  M++     D  +Y  +++   K
Sbjct: 458 FKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCK 517

Query: 583 AGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQT 642
           AG V   W+ + ++   G++PNV T N+++S       L +AY LL+ M   G  P+  T
Sbjct: 518 AGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGT 577

Query: 643 YTLLL 647
           Y  L+
Sbjct: 578 YNTLI 582



 Score =  133 bits (334), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 85/301 (28%), Positives = 150/301 (49%), Gaps = 7/301 (2%)

Query: 358 HDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDV 417
           H  +TY  ++    R  Q      LL +M++ G +P++VT + L++ Y     +++A+ +
Sbjct: 118 HGLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVAL 177

Query: 418 FKQMQVVGCEPDRVTYCTLID---IHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
             QM  +G  PD +T+ TLI    +H KA     A+ +  +M   G  P+  TY V++N 
Sbjct: 178 VDQMVEMGYRPDTITFTTLIHGLFLHNKAS---EAVALVDRMVQRGCQPNLVTYGVVVNG 234

Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPD 534
           L K G    A  L  +M       ++V +N +I    K R+   AL L+++M+  G  P+
Sbjct: 235 LCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPN 294

Query: 535 KVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYE 594
            VTYS ++  L   G   +A  + ++M  K   P+   +  L+D + K G   +A + Y+
Sbjct: 295 VVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYD 354

Query: 595 AMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTY-TLLLSCCTEA 653
            M++  + P++ T NSL++ F    +L  A  + + M++    P + TY TL+   C   
Sbjct: 355 DMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSK 414

Query: 654 R 654
           R
Sbjct: 415 R 415



 Score =  126 bits (317), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 102/396 (25%), Positives = 175/396 (44%), Gaps = 24/396 (6%)

Query: 363 YTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQ 422
           +  ++  + + ++F  +  L ++M R      + TYN LI+ + R + ++ AL +  +M 
Sbjct: 88  FNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILINCFCRRSQISLALALLGKMM 147

Query: 423 VVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQ 482
            +G EP  VT  +L++ +     +  A+ +  +M   G  PDT T++ +I+ L       
Sbjct: 148 KLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKAS 207

Query: 483 AAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVM 542
            A  L   MV +GC PNLVTY +++    K  +   AL L   M+ A  E D V ++ ++
Sbjct: 208 EAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTII 267

Query: 543 EVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLR 602
           + L    ++D+A  +F EM  K   P+   Y  L+      G    A +    M++  + 
Sbjct: 268 DSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKIN 327

Query: 603 PNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGFC 662
           PN+ T N+L+ AF++ G+  +A  L   M+   + P + TY  L++           GFC
Sbjct: 328 PNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVN-----------GFC 376

Query: 663 HELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSED-----RE-SKRGLVDAV 716
                        F++S     PD       +  F +    ED     RE S RGLV   
Sbjct: 377 MHDRLDKAKQMFEFMVS-KDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDT 435

Query: 717 VDF------LHKSGLKEEAGSVWEVAAQKNVYPDAV 746
           V +      L   G  + A  V++      V PD +
Sbjct: 436 VTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIM 471



 Score =  119 bits (298), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 71/270 (26%), Positives = 137/270 (50%)

Query: 362 TYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQM 421
           T+  ++    +  +F    KL D M++    P++ TYN L++ +   + L++A  +F+ M
Sbjct: 332 TFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFM 391

Query: 422 QVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHL 481
               C PD VTY TLI    K+  ++   +++++M   GL  DT TY+ +I  L   G  
Sbjct: 392 VSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDC 451

Query: 482 QAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIV 541
             A ++F +MV+ G  P+++TY+I++         + AL+++  MQ +  + D   Y+ +
Sbjct: 452 DNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTM 511

Query: 542 MEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGL 601
           +E +   G +D+   +F  +  K   P+   Y  ++        +++A+   + M + G 
Sbjct: 512 IEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGP 571

Query: 602 RPNVPTCNSLLSAFLRVGQLSDAYHLLQGM 631
            PN  T N+L+ A LR G  + +  L++ M
Sbjct: 572 LPNSGTYNTLIRAHLRDGDKAASAELIREM 601



 Score = 99.8 bits (247), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 65/221 (29%), Positives = 105/221 (47%)

Query: 359 DEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVF 418
           D  TY T++    ++++     +L  +M   G   + VTY  LI         + A  VF
Sbjct: 399 DVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVF 458

Query: 419 KQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKA 478
           KQM   G  PD +TY  L+D     G L+ A++++  MQ + +  D + Y+ +I  + KA
Sbjct: 459 KQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKA 518

Query: 479 GHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTY 538
           G +     LFC +  +G  PN+VTYN MI+     R  Q A  L + M+  G  P+  TY
Sbjct: 519 GKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTY 578

Query: 539 SIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDL 579
           + ++      G    +  +  EMR   +V D    GL+ ++
Sbjct: 579 NTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLVANM 619



 Score = 95.1 bits (235), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 63/200 (31%), Positives = 101/200 (50%), Gaps = 1/200 (0%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           G   D  TYTT++  L          K+  QMV DG  P+++TY+ L+        L +A
Sbjct: 430 GLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKA 489

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
           L+VF  MQ    + D   Y T+I+   KAG +D   D++  +   G+ P+  TY+ +I+ 
Sbjct: 490 LEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISG 549

Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPD 534
           L     LQ A+ L  +M   G +PN  TYN +I    +  +  ++ +L R+M++  F  D
Sbjct: 550 LCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGD 609

Query: 535 KVTYSIVMEVLGHCGYLDEA 554
             T  +V  +L H G LD++
Sbjct: 610 ASTIGLVANML-HDGRLDKS 628



 Score = 94.7 bits (234), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 62/245 (25%), Positives = 118/245 (48%), Gaps = 1/245 (0%)

Query: 411 LNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSV 470
           L++A+ +F  M      P  V +  L+   AK    DV + + +KMQ   +    +TY++
Sbjct: 66  LDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNI 125

Query: 471 IINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAG 530
           +INC  +   +  A  L  +M+  G  P++VT + ++      +    A+ L   M   G
Sbjct: 126 LINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMG 185

Query: 531 FEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAW 590
           + PD +T++ ++  L       EA A+   M ++   P+   YG++V+   K G+   A 
Sbjct: 186 YRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLAL 245

Query: 591 EWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSC- 649
                M  A +  +V   N+++ +  +   + DA +L + M   G++P++ TY+ L+SC 
Sbjct: 246 NLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCL 305

Query: 650 CTEAR 654
           C+  R
Sbjct: 306 CSYGR 310


>gi|357159762|ref|XP_003578551.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20300,
           mitochondrial-like [Brachypodium distachyon]
          Length = 534

 Score =  158 bits (400), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 89/258 (34%), Positives = 141/258 (54%), Gaps = 5/258 (1%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           +QAG   + +TYT ++  + RA Q     +LL QM+  GC PN  T+N ++ ++ +A   
Sbjct: 266 QQAGIMPNVYTYTAVIDAMYRAGQVPRAQELLCQMIDSGCPPNTATFNAIMRAHVKAGRS 325

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGF--LDVAMDMYKKMQAAGLSPDTFTYS 469
            + L V  QM+ +GC+PD +TY  L++ H   G   LD AM +  KM A G +PD  T++
Sbjct: 326 EQVLQVHNQMRQLGCDPDIITYNFLMETHCGKGQSNLDAAMKLLLKMIAKGCTPDCHTFN 385

Query: 470 VIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNA 529
            ++  +   G++ AAH+L+  M    C PN++TYN+++ L  K ++    L++ +DM   
Sbjct: 386 PMLKLVVVLGNVDAAHKLYERMQELQCKPNVITYNLLMKLFGKDKSMDMVLRIKKDMDAQ 445

Query: 530 GFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRR-KNWVPDEPVYGLLVDLWGKAGNVRK 588
           G EP+  TY  ++E     G    A A   EM   K+  P +PVY +++ L  KAG +RK
Sbjct: 446 GVEPNVNTYGALIETFCGRGNWKRAYATLREMLEVKSLKPKKPVYDMVLVLLRKAGQLRK 505

Query: 589 AWEWYEAMLQAGL--RPN 604
             E  E M   G   RP+
Sbjct: 506 HEELVELMADRGFIKRPS 523



 Score =  147 bits (372), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 96/344 (27%), Positives = 157/344 (45%), Gaps = 41/344 (11%)

Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLI 402
           AL FFN +            Y +M+ +L +   F     LLD+M +     +      LI
Sbjct: 117 ALAFFNHVLPSLPTDSLPELYASMMDLLAKHHHFPLARHLLDEMRKRSIPISSQVILALI 176

Query: 403 HSYGRANYLNEALDVFKQMQVVG-----------------------------------CE 427
             Y RA   +EA D+F+ M+  G                                     
Sbjct: 177 RRYVRAGMSSEASDLFRSMEEYGGGVPDPAVLASLLGALSKKRLASEAQALFDSYKSVFT 236

Query: 428 PDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQL 487
           PD V Y TL+    ++G LD A  ++ +MQ AG+ P+ +TY+ +I+ + +AG +  A +L
Sbjct: 237 PDVVLYTTLVHAWCRSGCLDKAEQVFAEMQQAGIMPNVYTYTAVIDAMYRAGQVPRAQEL 296

Query: 488 FCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGH 547
            C+M++ GC PN  T+N ++    KA   +  L+++  M+  G +PD +TY+ +ME   H
Sbjct: 297 LCQMIDSGCPPNTATFNAIMRAHVKAGRSEQVLQVHNQMRQLGCDPDIITYNFLMET--H 354

Query: 548 CGY----LDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRP 603
           CG     LD A  +  +M  K   PD   +  ++ L    GNV  A + YE M +   +P
Sbjct: 355 CGKGQSNLDAAMKLLLKMIAKGCTPDCHTFNPMLKLVVVLGNVDAAHKLYERMQELQCKP 414

Query: 604 NVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
           NV T N L+  F +   +     + + M   G++P++ TY  L+
Sbjct: 415 NVITYNLLMKLFGKDKSMDMVLRIKKDMDAQGVEPNVNTYGALI 458



 Score =  132 bits (332), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 80/284 (28%), Positives = 141/284 (49%), Gaps = 3/284 (1%)

Query: 356 FKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEAL 415
           F  D   YTT+V    R+       ++  +M + G  PNV TY  +I +  RA  +  A 
Sbjct: 235 FTPDVVLYTTLVHAWCRSGCLDKAEQVFAEMQQAGIMPNVYTYTAVIDAMYRAGQVPRAQ 294

Query: 416 DVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII--N 473
           ++  QM   GC P+  T+  ++  H KAG  +  + ++ +M+  G  PD  TY+ ++  +
Sbjct: 295 ELLCQMIDSGCPPNTATFNAIMRAHVKAGRSEQVLQVHNQMRQLGCDPDIITYNFLMETH 354

Query: 474 CLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEP 533
           C     +L AA +L  +M+ +GC P+  T+N M+ L     N  +A KLY  MQ    +P
Sbjct: 355 CGKGQSNLDAAMKLLLKMIAKGCTPDCHTFNPMLKLVVVLGNVDAAHKLYERMQELQCKP 414

Query: 534 DKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWY 593
           + +TY+++M++ G    +D    +  +M  +   P+   YG L++ +   GN ++A+   
Sbjct: 415 NVITYNLLMKLFGKDKSMDMVLRIKKDMDAQGVEPNVNTYGALIETFCGRGNWKRAYATL 474

Query: 594 EAMLQA-GLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGL 636
             ML+   L+P  P  + +L    + GQL     L++ M + G 
Sbjct: 475 REMLEVKSLKPKKPVYDMVLVLLRKAGQLRKHEELVELMADRGF 518



 Score = 72.4 bits (176), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 54/190 (28%), Positives = 93/190 (48%), Gaps = 8/190 (4%)

Query: 468 YSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIAL---QAKARNYQSALKLYR 524
           Y+ +++ L K  H   A  L  EM  +  IP  ++  +++AL     +A     A  L+R
Sbjct: 137 YASMMDLLAKHHHFPLARHLLDEMRKRS-IP--ISSQVILALIRRYVRAGMSSEASDLFR 193

Query: 525 DMQN-AGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKA 583
            M+   G  PD    + ++  L       EA+A+F +  +  + PD  +Y  LV  W ++
Sbjct: 194 SMEEYGGGVPDPAVLASLLGALSKKRLASEAQALF-DSYKSVFTPDVVLYTTLVHAWCRS 252

Query: 584 GNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTY 643
           G + KA + +  M QAG+ PNV T  +++ A  R GQ+  A  LL  M++ G  P+  T+
Sbjct: 253 GCLDKAEQVFAEMQQAGIMPNVYTYTAVIDAMYRAGQVPRAQELLCQMIDSGCPPNTATF 312

Query: 644 TLLLSCCTEA 653
             ++    +A
Sbjct: 313 NAIMRAHVKA 322


>gi|224031359|gb|ACN34755.1| unknown [Zea mays]
          Length = 504

 Score =  158 bits (400), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 122/502 (24%), Positives = 220/502 (43%), Gaps = 16/502 (3%)

Query: 354 AGFKHDEHTYTTMVGILGRARQFGAINKLLDQM-VRDGCQPNVVTYNRLIHSYGRANYLN 412
           AG   D  TY+T++    R RQF    +  ++M   DG  P+ VTY+ ++  Y +     
Sbjct: 4   AGVPLDNITYSTLITAARRCRQFAKAVEWFERMYAADGVLPDEVTYSAVLDVYAQLGMKE 63

Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
           E L +F + +  G +PD V +  L  +  +AG  D    ++K+M+  G+ P+ F Y+ ++
Sbjct: 64  EVLALFDRARGSGWKPDHVAFAVLAKMFGEAGDYDGIQFVFKEMREVGIKPNIFVYNALL 123

Query: 473 NCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFE 532
             LGK G    A  LF EM++QG  PN  T   +  +  +AR  + AL+L+  M+     
Sbjct: 124 EALGKTGKPGLARNLFEEMIDQGVEPNARTLTALAKIYGRARWGRDALQLWDKMRELKLP 183

Query: 533 PDKVTYSIVMEVLGHCGYLDEAEAVFAEMR----RKNWVPDEPVYGLLVDLWGKAGNVRK 588
            D +  + ++ +    G + EAE +F EM+    R    PD+  Y  +++++G  G+   
Sbjct: 184 ADSILCNTLLSMCADVGLVAEAEQLFNEMKDPECRDVPKPDKWSYTAMINIYGSNGDTDS 243

Query: 589 AWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
           A + +  ML+ G+ PN+ +   ++    +  ++  A  +L+  L  GLKP  +    LLS
Sbjct: 244 ALQLFAEMLKGGIEPNIMSYTIVIQCLGKARRIQQAVEVLESGLEKGLKPDDRLCGCLLS 303

Query: 649 CCTEARSPYDMGFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLE-MMHSEDRE 707
                      G   E++  S    +  L+ +     D Q   D +   L+ +++S   E
Sbjct: 304 VIA-----LSSGEEMEMVLSSLEKVNQNLVKLIRVLGDAQVGGDDITEELKSVLNSAAPE 358

Query: 708 SKRGLVDAVVDFLHKSGL-KEEAGSVWEVAAQKNVYPDAVKEKGMSYWLINLHVMSDGTA 766
            +R   + ++D     G   + A  V+ +A    +Y   ++ +    W ++L  +S G A
Sbjct: 359 VRRPYCNCLIDVCRNHGFPPQRAREVFHLAQTYGLY-SKLQSRKDEEWSLDLRSLSVGAA 417

Query: 767 VIALSRTLAWFRKQMLISGVGPSRIDIVTGWGRRSRVTGTSLVRQAVQELLHMFSFPFFT 826
             A    +    ++       P    + TG        G +    A    L   + PF  
Sbjct: 418 KTAFDDWMQTVSERWAQQKDLPESFSVYTGSSTHKFAQGLA---SAFAAHLDQMAVPFHA 474

Query: 827 ENGNSGCFVGCGEPLNKWLLQS 848
               +G F+   + L  WL  S
Sbjct: 475 SESQAGSFISSRDDLVSWLQMS 496



 Score =  106 bits (265), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 67/249 (26%), Positives = 118/249 (47%), Gaps = 5/249 (2%)

Query: 333 VLKQLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQ 392
           V  QL      L  F+   R +G+K D   +  +  + G A  +  I  +  +M   G +
Sbjct: 55  VYAQLGMKEEVLALFD-RARGSGWKPDHVAFAVLAKMFGEAGDYDGIQFVFKEMREVGIK 113

Query: 393 PNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDM 452
           PN+  YN L+ + G+      A ++F++M   G EP+  T   L  I+ +A +   A+ +
Sbjct: 114 PNIFVYNALLEALGKTGKPGLARNLFEEMIDQGVEPNARTLTALAKIYGRARWGRDALQL 173

Query: 453 YKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGC----IPNLVTYNIMIA 508
           + KM+   L  D+   + +++     G +  A QLF EM +  C     P+  +Y  MI 
Sbjct: 174 WDKMRELKLPADSILCNTLLSMCADVGLVAEAEQLFNEMKDPECRDVPKPDKWSYTAMIN 233

Query: 509 LQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVP 568
           +     +  SAL+L+ +M   G EP+ ++Y+IV++ LG    + +A  V      K   P
Sbjct: 234 IYGSNGDTDSALQLFAEMLKGGIEPNIMSYTIVIQCLGKARRIQQAVEVLESGLEKGLKP 293

Query: 569 DEPVYGLLV 577
           D+ + G L+
Sbjct: 294 DDRLCGCLL 302



 Score = 59.3 bits (142), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 41/165 (24%), Positives = 70/165 (42%), Gaps = 36/165 (21%)

Query: 526 MQNAGFEPD------------------------------------KVTYSIVMEVLGHCG 549
           M +AG   D                                    +VTYS V++V    G
Sbjct: 1   MLDAGVPLDNITYSTLITAARRCRQFAKAVEWFERMYAADGVLPDEVTYSAVLDVYAQLG 60

Query: 550 YLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCN 609
             +E  A+F   R   W PD   + +L  ++G+AG+       ++ M + G++PN+   N
Sbjct: 61  MKEEVLALFDRARGSGWKPDHVAFAVLAKMFGEAGDYDGIQFVFKEMREVGIKPNIFVYN 120

Query: 610 SLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEAR 654
           +LL A  + G+   A +L + M++ G++P+ +T T L      AR
Sbjct: 121 ALLEALGKTGKPGLARNLFEEMIDQGVEPNARTLTALAKIYGRAR 165


>gi|147789724|emb|CAN67401.1| hypothetical protein VITISV_025967 [Vitis vinifera]
          Length = 592

 Score =  158 bits (400), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 103/358 (28%), Positives = 171/358 (47%), Gaps = 24/358 (6%)

Query: 306 RQWKWGPLAE-----EALGNTNYSMDAYQANQVLKQLQDHTVALGFFNWLRRQAGFKHDE 360
           R  K G   E     E L N  Y+ D     +++K         GFFN+   +   +  E
Sbjct: 87  RSCKAGKFNESLYFLECLVNKGYTPDVILCTKLIK---------GFFNFKNIEKASRVME 137

Query: 361 ----HT------YTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANY 410
               HT      Y  ++    +  Q  A  ++L++M   G  P++VTYN +I S      
Sbjct: 138 ILESHTEPDVFAYNAVISGFCKVNQIEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRRK 197

Query: 411 LNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSV 470
           L  AL V  Q+ +  C P  +TY  LI+     G ++ AM + ++M A GL PD +TY+ 
Sbjct: 198 LGLALTVLDQLLLDNCMPTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNA 257

Query: 471 IINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAG 530
           II  + K G ++ A +L   + ++GC P++++YNI++        +    KL  +M + G
Sbjct: 258 IIRGMCKEGMVERAAELITSLTSKGCEPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRG 317

Query: 531 FEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAW 590
            EP+KVTYSI++  L   G +DEA +V   M  K   PD   Y  L+    K G +  A 
Sbjct: 318 CEPNKVTYSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAI 377

Query: 591 EWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
              + M+  G  P++   N++L+A  + G  + A  +   +  +G  P++ +Y  ++S
Sbjct: 378 GIMDYMISNGCLPDIVNYNTILAALCKNGNANQALEIFNKLRGMGCPPNVSSYNTMIS 435



 Score =  156 bits (395), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 105/414 (25%), Positives = 191/414 (46%), Gaps = 11/414 (2%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           +  GF  D  TY  M+G L   R+ G    +LDQ++ D C P V+TY  LI +      +
Sbjct: 174 KARGFLPDIVTYNIMIGSLCNRRKLGLALTVLDQLLLDNCMPTVITYTILIEATIVEGGI 233

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
           NEA+ + ++M   G  PD  TY  +I    K G ++ A ++   + + G  PD  +Y+++
Sbjct: 234 NEAMKLLEEMLARGLLPDMYTYNAIIRGMCKEGMVERAAELITSLTSKGCEPDVISYNIL 293

Query: 472 INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF 531
           +      G      +L  EM ++GC PN VTY+I+I+   +      A+ + + M     
Sbjct: 294 LRAFLNQGKWDEGEKLVAEMFSRGCEPNKVTYSILISSLCRFGRIDEAISVLKVMIEKEL 353

Query: 532 EPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWE 591
            PD  +Y  ++  L   G LD A  +   M     +PD   Y  ++    K GN  +A E
Sbjct: 354 TPDTYSYDPLISALCKEGRLDLAIGIMDYMISNGCLPDIVNYNTILAALCKNGNANQALE 413

Query: 592 WYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSC-C 650
            +  +   G  PNV + N+++SA    G  S A  ++  M++ G+ P   TY  L+SC C
Sbjct: 414 IFNKLRGMGCPPNVSSYNTMISALWSCGDRSRALGMVPAMISKGIDPDEITYNSLISCLC 473

Query: 651 TEARSPYDMGFCHELMAVSGHPA----HMFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDR 706
            +      +G   ++      P     ++ LL +       + + D +G F EM+    R
Sbjct: 474 RDGLVEEAIGLLDDMEQSGFRPTVISYNIVLLGLCKV----RRIDDAIGMFAEMIEKGCR 529

Query: 707 ESKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYP-DAVKEKGMSYWLINLH 759
            ++   +  +++ +  +G + EA  +      ++V   D+ K    ++ +++++
Sbjct: 530 PNETTYI-LLIEGIGFAGWRTEAMELANSLFSRDVISQDSFKRLNKTFPMLDVY 582



 Score = 77.0 bits (188), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 68/310 (21%), Positives = 130/310 (41%), Gaps = 36/310 (11%)

Query: 436 LIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQG 495
           L++   KAG  + ++   + +   G +PD    + +I       +++ A ++  E++   
Sbjct: 84  LLNRSCKAGKFNESLYFLECLVNKGYTPDVILCTKLIKGFFNFKNIEKASRVM-EILESH 142

Query: 496 CIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAE 555
             P++  YN +I+   K    ++A ++   M+  GF PD VTY+I++  L +   L  A 
Sbjct: 143 TEPDVFAYNAVISGFCKVNQIEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRRKLGLAL 202

Query: 556 AVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAF 615
            V  ++   N +P    Y +L++     G + +A +  E ML  GL P++ T N+++   
Sbjct: 203 TVLDQLLLDNCMPTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGM 262

Query: 616 LRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGFCHELMAVSGHPAHM 675
            + G +  A  L+  + + G +P + +Y +LL                            
Sbjct: 263 CKEGMVERAAELITSLTSKGCEPDVISYNILL--------------------------RA 296

Query: 676 FLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRESKRGLVDAVVDFLHKSGLKEEAGSVWEV 735
           FL          Q   D     +  M S   E  +     ++  L + G  +EA SV +V
Sbjct: 297 FL---------NQGKWDEGEKLVAEMFSRGCEPNKVTYSILISSLCRFGRIDEAISVLKV 347

Query: 736 AAQKNVYPDA 745
             +K + PD 
Sbjct: 348 MIEKELTPDT 357



 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 44/149 (29%), Positives = 70/149 (46%), Gaps = 9/149 (6%)

Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGIL----GRARQFGAINKLLDQMVRDGCQPNVVTY 398
           AL  FN LR   G   +  +Y TM+  L     R+R  G    ++  M+  G  P+ +TY
Sbjct: 411 ALEIFNKLRGM-GCPPNVSSYNTMISALWSCGDRSRALG----MVPAMISKGIDPDEITY 465

Query: 399 NRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQA 458
           N LI    R   + EA+ +   M+  G  P  ++Y  ++    K   +D A+ M+ +M  
Sbjct: 466 NSLISCLCRDGLVEEAIGLLDDMEQSGFRPTVISYNIVLLGLCKVRRIDDAIGMFAEMIE 525

Query: 459 AGLSPDTFTYSVIINCLGKAGHLQAAHQL 487
            G  P+  TY ++I  +G AG    A +L
Sbjct: 526 KGCRPNETTYILLIEGIGFAGWRTEAMEL 554



 Score = 44.3 bits (103), Expect = 0.30,   Method: Compositional matrix adjust.
 Identities = 50/265 (18%), Positives = 104/265 (39%), Gaps = 28/265 (10%)

Query: 549 GYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTC 608
           G  +E+      +  K + PD  +   L+  +    N+ KA    E +L++   P+V   
Sbjct: 92  GKFNESLYFLECLVNKGYTPDVILCTKLIKGFFNFKNIEKASRVME-ILESHTEPDVFAY 150

Query: 609 NSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL-SCCTEARSPYDMGFCHELMA 667
           N+++S F +V Q+  A  +L  M   G  P + TY +++ S C   +    +    +L+ 
Sbjct: 151 NAVISGFCKVNQIEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRRKLGLALTVLDQLLL 210

Query: 668 VSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRESKRGLV------DAVVDFLH 721
            +  P  +    +         + + +    EM+        RGL+      +A++  + 
Sbjct: 211 DNCMPTVITYTILIEATIVEGGINEAMKLLEEML-------ARGLLPDMYTYNAIIRGMC 263

Query: 722 KSGLKEEAGSVWEVAAQKNVYPDAVKEKGMSYWLINLHVMSDGTAVIALSRTLAWFRKQM 781
           K G+ E A  +      K   PD +    +    +N     +G  ++A          +M
Sbjct: 264 KEGMVERAAELITSLTSKGCEPDVISYNILLRAFLNQGKWDEGEKLVA----------EM 313

Query: 782 LISGVGPSRID---IVTGWGRRSRV 803
              G  P+++    +++   R  R+
Sbjct: 314 FSRGCEPNKVTYSILISSLCRFGRI 338


>gi|255556189|ref|XP_002519129.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223541792|gb|EEF43340.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 643

 Score =  158 bits (400), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 104/331 (31%), Positives = 166/331 (50%), Gaps = 41/331 (12%)

Query: 355 GFKHDEHTYTTMV-GILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNE 413
           G K +  TY T++ G   R R  GA   +LD M   G +P+  TY  LI    +   L E
Sbjct: 266 GVKPNVVTYNTVIHGYCSRGRVEGA-RMVLDIMKNRGVEPDSYTYGSLISGMCKGGKLEE 324

Query: 414 ALDVFKQMQVVGCEPDRVTYCTLIDIHAKAG----------------------------- 444
           A  + ++M+ +G  P  VTY TLID +   G                             
Sbjct: 325 ASGILEKMKEIGLLPTAVTYNTLIDGYCNKGDLVKAFGYRDEMVRRAILPTVSTYNLLIH 384

Query: 445 --FLDVAMD----MYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIP 498
             FL+  MD    M K M  +G+ PD+ TY+++IN   + G+ + A  L  EM+++G  P
Sbjct: 385 ALFLEGKMDEADGMIKDMGDSGIVPDSITYNILINGYCRCGNAKKAFNLHDEMISKGIQP 444

Query: 499 NLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHC--GYLDEAEA 556
            LVTY  +I + +K    ++A  L+  +   G  PD + ++ +++  GHC  G LD A A
Sbjct: 445 TLVTYTSLIYVLSKRNRMKAADDLFEKIIREGASPDLIMFNALID--GHCANGNLDRAFA 502

Query: 557 VFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFL 616
           +  EM ++N VPDE  Y  L+    + G V +A E  + M + G+RP+  + N+L+S + 
Sbjct: 503 LLKEMDKRNIVPDEVTYNTLMQGRCREGKVEEARELLKEMKRRGIRPDHISYNTLISGYS 562

Query: 617 RVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
           + G ++DA+ +   ML++G  P+L TY  L+
Sbjct: 563 KRGDINDAFTIRDEMLSIGFNPTLLTYNALI 593



 Score =  147 bits (372), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 84/266 (31%), Positives = 137/266 (51%), Gaps = 4/266 (1%)

Query: 384 DQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKA 443
           D+MVR    P V TYN LIH+      ++EA  + K M   G  PD +TY  LI+ + + 
Sbjct: 365 DEMVRRAILPTVSTYNLLIHALFLEGKMDEADGMIKDMGDSGIVPDSITYNILINGYCRC 424

Query: 444 GFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTY 503
           G    A +++ +M + G+ P   TY+ +I  L K   ++AA  LF +++ +G  P+L+ +
Sbjct: 425 GNAKKAFNLHDEMISKGIQPTLVTYTSLIYVLSKRNRMKAADDLFEKIIREGASPDLIMF 484

Query: 504 NIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHC--GYLDEAEAVFAEM 561
           N +I       N   A  L ++M      PD+VTY+ +M+  G C  G ++EA  +  EM
Sbjct: 485 NALIDGHCANGNLDRAFALLKEMDKRNIVPDEVTYNTLMQ--GRCREGKVEEARELLKEM 542

Query: 562 RRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQL 621
           +R+   PD   Y  L+  + K G++  A+   + ML  G  P + T N+L+    +  Q 
Sbjct: 543 KRRGIRPDHISYNTLISGYSKRGDINDAFTIRDEMLSIGFNPTLLTYNALIQGLCKNQQG 602

Query: 622 SDAYHLLQGMLNLGLKPSLQTYTLLL 647
             A  LL+ M++ G+ P   TY  L+
Sbjct: 603 DLAEELLKEMVSKGITPDDSTYFSLI 628



 Score =  124 bits (312), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 75/298 (25%), Positives = 143/298 (47%)

Query: 350 LRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRAN 409
           + ++ G      T+  M+ +  +  Q   +  L  +M R   +  V T+N +I+   +  
Sbjct: 191 MMKEKGVVPKIETFNAMLSLFLKLNQTETVWVLYAEMFRLKIKSTVYTFNIMINVLCKEG 250

Query: 410 YLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYS 469
            L +A D    M+ +G +P+ VTY T+I  +   G ++ A  +   M+  G+ PD++TY 
Sbjct: 251 KLKKAKDFIGSMENLGVKPNVVTYNTVIHGYCSRGRVEGARMVLDIMKNRGVEPDSYTYG 310

Query: 470 VIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNA 529
            +I+ + K G L+ A  +  +M   G +P  VTYN +I       +   A     +M   
Sbjct: 311 SLISGMCKGGKLEEASGILEKMKEIGLLPTAVTYNTLIDGYCNKGDLVKAFGYRDEMVRR 370

Query: 530 GFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKA 589
              P   TY++++  L   G +DEA+ +  +M     VPD   Y +L++ + + GN +KA
Sbjct: 371 AILPTVSTYNLLIHALFLEGKMDEADGMIKDMGDSGIVPDSITYNILINGYCRCGNAKKA 430

Query: 590 WEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
           +  ++ M+  G++P + T  SL+    +  ++  A  L + ++  G  P L  +  L+
Sbjct: 431 FNLHDEMISKGIQPTLVTYTSLIYVLSKRNRMKAADDLFEKIIREGASPDLIMFNALI 488



 Score =  117 bits (293), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 69/236 (29%), Positives = 116/236 (49%)

Query: 354 AGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNE 413
           +G   D  TY  ++    R         L D+M+  G QP +VTY  LI+   + N +  
Sbjct: 405 SGIVPDSITYNILINGYCRCGNAKKAFNLHDEMISKGIQPTLVTYTSLIYVLSKRNRMKA 464

Query: 414 ALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIIN 473
           A D+F+++   G  PD + +  LID H   G LD A  + K+M    + PD  TY+ ++ 
Sbjct: 465 ADDLFEKIIREGASPDLIMFNALIDGHCANGNLDRAFALLKEMDKRNIVPDEVTYNTLMQ 524

Query: 474 CLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEP 533
              + G ++ A +L  EM  +G  P+ ++YN +I+  +K  +   A  +  +M + GF P
Sbjct: 525 GRCREGKVEEARELLKEMKRRGIRPDHISYNTLISGYSKRGDINDAFTIRDEMLSIGFNP 584

Query: 534 DKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKA 589
             +TY+ +++ L      D AE +  EM  K   PD+  Y  L++  GK  +  +A
Sbjct: 585 TLLTYNALIQGLCKNQQGDLAEELLKEMVSKGITPDDSTYFSLIEGIGKVDDSSEA 640



 Score =  116 bits (291), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 97/432 (22%), Positives = 192/432 (44%), Gaps = 20/432 (4%)

Query: 388 RDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLD 447
           R G + ++V ++ LI +       ++A + F  M+  G  P   T+  ++ +  K    +
Sbjct: 160 RLGTKSSIV-FDMLIRACCELKRGDDAFECFDMMKEKGVVPKIETFNAMLSLFLKLNQTE 218

Query: 448 VAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMI 507
               +Y +M    +    +T++++IN L K G L+ A      M N G  PN+VTYN +I
Sbjct: 219 TVWVLYAEMFRLKIKSTVYTFNIMINVLCKEGKLKKAKDFIGSMENLGVKPNVVTYNTVI 278

Query: 508 ALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWV 567
                    + A  +   M+N G EPD  TY  ++  +   G L+EA  +  +M+    +
Sbjct: 279 HGYCSRGRVEGARMVLDIMKNRGVEPDSYTYGSLISGMCKGGKLEEASGILEKMKEIGLL 338

Query: 568 PDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHL 627
           P    Y  L+D +   G++ KA+ + + M++  + P V T N L+ A    G++ +A  +
Sbjct: 339 PTAVTYNTLIDGYCNKGDLVKAFGYRDEMVRRAILPTVSTYNLLIHALFLEGKMDEADGM 398

Query: 628 LQGMLNLGLKPSLQTYTLLLS--C-CTEARSPYDMGFCHELMAVSGHPAHMFLLSMPSPG 684
           ++ M + G+ P   TY +L++  C C  A+  +++   H+ M   G    +   +     
Sbjct: 399 IKDMGDSGIVPDSITYNILINGYCRCGNAKKAFNL---HDEMISKGIQPTLVTYTSLIYV 455

Query: 685 PDGQNVRDHVGSFLEMMHSEDRESKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPD 744
              +N         E +  E       + +A++D    +G  + A ++ +   ++N+ PD
Sbjct: 456 LSKRNRMKAADDLFEKIIREGASPDLIMFNALIDGHCANGNLDRAFALLKEMDKRNIVPD 515

Query: 745 AVKEKGMSYWLINLHVMSDGTAVIALSRTLAWFRKQMLISGVGPSRID---IVTGWGRRS 801
            V     +Y  +      +G   +  +R L    K+M   G+ P  I    +++G+ +R 
Sbjct: 516 EV-----TYNTLMQGRCREGK--VEEARELL---KEMKRRGIRPDHISYNTLISGYSKRG 565

Query: 802 RVTGTSLVRQAV 813
            +     +R  +
Sbjct: 566 DINDAFTIRDEM 577



 Score =  108 bits (270), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 89/348 (25%), Positives = 157/348 (45%), Gaps = 14/348 (4%)

Query: 283 GLAPFSRHFAS------TGNVVESVSRILRQWKWGPLAEEALGNTNYSMDAYQANQVLKQ 336
           G+ P S  + S       G  +E  S IL + K   L   A+   N  +D Y  N+    
Sbjct: 301 GVEPDSYTYGSLISGMCKGGKLEEASGILEKMKEIGLLPTAV-TYNTLIDGY-CNK---- 354

Query: 337 LQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVV 396
             D   A G+ + + R+A       TY  ++  L    +    + ++  M   G  P+ +
Sbjct: 355 -GDLVKAFGYRDEMVRRAILP-TVSTYNLLIHALFLEGKMDEADGMIKDMGDSGIVPDSI 412

Query: 397 TYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKM 456
           TYN LI+ Y R     +A ++  +M   G +P  VTY +LI + +K   +  A D+++K+
Sbjct: 413 TYNILINGYCRCGNAKKAFNLHDEMISKGIQPTLVTYTSLIYVLSKRNRMKAADDLFEKI 472

Query: 457 QAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNY 516
              G SPD   ++ +I+     G+L  A  L  EM  +  +P+ VTYN ++  + +    
Sbjct: 473 IREGASPDLIMFNALIDGHCANGNLDRAFALLKEMDKRNIVPDEVTYNTLMQGRCREGKV 532

Query: 517 QSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLL 576
           + A +L ++M+  G  PD ++Y+ ++      G +++A  +  EM    + P    Y  L
Sbjct: 533 EEARELLKEMKRRGIRPDHISYNTLISGYSKRGDINDAFTIRDEMLSIGFNPTLLTYNAL 592

Query: 577 VDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDA 624
           +    K      A E  + M+  G+ P+  T  SL+    +V   S+A
Sbjct: 593 IQGLCKNQQGDLAEELLKEMVSKGITPDDSTYFSLIEGIGKVDDSSEA 640



 Score =  106 bits (265), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 70/267 (26%), Positives = 127/267 (47%), Gaps = 4/267 (1%)

Query: 383 LDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAK 442
            D M   G  P + T+N ++  + + N       ++ +M  +  +    T+  +I++  K
Sbjct: 189 FDMMKEKGVVPKIETFNAMLSLFLKLNQTETVWVLYAEMFRLKIKSTVYTFNIMINVLCK 248

Query: 443 AGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVT 502
            G L  A D    M+  G+ P+  TY+ +I+     G ++ A  +   M N+G  P+  T
Sbjct: 249 EGKLKKAKDFIGSMENLGVKPNVVTYNTVIHGYCSRGRVEGARMVLDIMKNRGVEPDSYT 308

Query: 503 YNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHC--GYLDEAEAVFAE 560
           Y  +I+   K    + A  +   M+  G  P  VTY+ +++  G+C  G L +A     E
Sbjct: 309 YGSLISGMCKGGKLEEASGILEKMKEIGLLPTAVTYNTLID--GYCNKGDLVKAFGYRDE 366

Query: 561 MRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQ 620
           M R+  +P    Y LL+      G + +A    + M  +G+ P+  T N L++ + R G 
Sbjct: 367 MVRRAILPTVSTYNLLIHALFLEGKMDEADGMIKDMGDSGIVPDSITYNILINGYCRCGN 426

Query: 621 LSDAYHLLQGMLNLGLKPSLQTYTLLL 647
              A++L   M++ G++P+L TYT L+
Sbjct: 427 AKKAFNLHDEMISKGIQPTLVTYTSLI 453


>gi|22531122|gb|AAM97065.1| putative membrane-associated salt-inducible protein [Arabidopsis
           thaliana]
 gi|62320656|dbj|BAD95323.1| putative membrane-associated salt-inducible protein [Arabidopsis
           thaliana]
          Length = 596

 Score =  158 bits (400), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 92/297 (30%), Positives = 156/297 (52%), Gaps = 4/297 (1%)

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
           + G++ D  T+TT++  L    +      L+D+MV+ GCQPN+VTY  +++   +    +
Sbjct: 145 EMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTD 204

Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
            AL++  +M+    E D V + T+ID   K   +D A++++K+M+  G+ P+  TYS +I
Sbjct: 205 LALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLI 264

Query: 473 NCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFE 532
           +CL   G    A QL  +M+ +   PNLVT+N +I    K   +  A KLY DM     +
Sbjct: 265 SCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSID 324

Query: 533 PDKVTYSIVMEVLGHCGY--LDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAW 590
           PD  TY+ ++   G C +  LD+A+ +F  M  K+  PD   Y  L+  + K+  V    
Sbjct: 325 PDIFTYNSLVN--GFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGT 382

Query: 591 EWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
           E +  M   GL  +  T  +L+      G   +A  + + M++ G+ P + TY++LL
Sbjct: 383 ELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILL 439



 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 99/350 (28%), Positives = 165/350 (47%), Gaps = 21/350 (6%)

Query: 339 DHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTY 398
           D  +AL   N +   A  + D   + T++  L + R       L  +M   G +PNVVTY
Sbjct: 202 DTDLALNLLNKME-AAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTY 260

Query: 399 NRLIH---SYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKK 455
           + LI    SYGR    ++A  +   M      P+ VT+  LID   K G    A  +Y  
Sbjct: 261 SSLISCLCSYGR---WSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDD 317

Query: 456 MQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARN 515
           M    + PD FTY+ ++N       L  A Q+F  MV++ C P++VTYN +I    K++ 
Sbjct: 318 MIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKR 377

Query: 516 YQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGL 575
            +   +L+R+M + G   D VTY+ +++ L H G  D A+ VF +M      PD   Y +
Sbjct: 378 VEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSI 437

Query: 576 LVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLG 635
           L+D     G + KA E ++ M ++ ++ ++    +++    + G++ D + L   +   G
Sbjct: 438 LLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKG 497

Query: 636 LKPSLQTYTLLLSCCTEARSPYDMGFCHELMAVSGHPAHMFLLSMPSPGP 685
           +KP++ TY  ++S           G C + +      A+  L  M   GP
Sbjct: 498 VKPNVVTYNTMIS-----------GLCSKRLL---QEAYALLKKMKEDGP 533



 Score =  140 bits (352), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 100/393 (25%), Positives = 185/393 (47%), Gaps = 12/393 (3%)

Query: 382 LLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHA 441
           L+DQMV  G +P+ +T+  LIH     N  +EA+ +  +M   GC+P+ VTY  +++   
Sbjct: 139 LVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLC 198

Query: 442 KAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLV 501
           K G  D+A+++  KM+AA +  D   ++ II+ L K  H+  A  LF EM  +G  PN+V
Sbjct: 199 KRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVV 258

Query: 502 TYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEM 561
           TY+ +I+       +  A +L  DM      P+ VT++ +++     G   EAE ++ +M
Sbjct: 259 TYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDM 318

Query: 562 RRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQL 621
            +++  PD   Y  LV+ +     + KA + +E M+     P+V T N+L+  F +  ++
Sbjct: 319 IKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRV 378

Query: 622 SDAYHLLQGMLNLGLKPSLQTYTLLLSC------CTEARSPYDMGFCHELMAVSGHPAHM 675
            D   L + M + GL     TYT L+        C  A+  +      + M   G P  +
Sbjct: 379 EDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVF------KQMVSDGVPPDI 432

Query: 676 FLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRESKRGLVDAVVDFLHKSGLKEEAGSVWEV 735
              S+   G       +      + M   + +    +   +++ + K+G  ++   ++  
Sbjct: 433 MTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCS 492

Query: 736 AAQKNVYPDAVKEKGMSYWLINLHVMSDGTAVI 768
            + K V P+ V    M   L +  ++ +  A++
Sbjct: 493 LSLKGVKPNVVTYNTMISGLCSKRLLQEAYALL 525



 Score =  137 bits (346), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 87/305 (28%), Positives = 157/305 (51%), Gaps = 1/305 (0%)

Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLI 402
           AL  F  +  + G + +  TY++++  L    ++   ++LL  M+     PN+VT+N LI
Sbjct: 241 ALNLFKEMETK-GIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALI 299

Query: 403 HSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLS 462
            ++ +     EA  ++  M     +PD  TY +L++       LD A  M++ M +    
Sbjct: 300 DAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCF 359

Query: 463 PDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKL 522
           PD  TY+ +I    K+  ++   +LF EM ++G + + VTY  +I       +  +A K+
Sbjct: 360 PDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKV 419

Query: 523 YRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGK 582
           ++ M + G  PD +TYSI+++ L + G L++A  VF  M++     D  +Y  +++   K
Sbjct: 420 FKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCK 479

Query: 583 AGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQT 642
           AG V   W+ + ++   G++PNV T N+++S       L +AY LL+ M   G  P+  T
Sbjct: 480 AGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGT 539

Query: 643 YTLLL 647
           Y  L+
Sbjct: 540 YNTLI 544



 Score =  133 bits (334), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 85/301 (28%), Positives = 150/301 (49%), Gaps = 7/301 (2%)

Query: 358 HDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDV 417
           H  +TY  ++    R  Q      LL +M++ G +P++VT + L++ Y     +++A+ +
Sbjct: 80  HGLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVAL 139

Query: 418 FKQMQVVGCEPDRVTYCTLID---IHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
             QM  +G  PD +T+ TLI    +H KA     A+ +  +M   G  P+  TY V++N 
Sbjct: 140 VDQMVEMGYRPDTITFTTLIHGLFLHNKAS---EAVALVDRMVQRGCQPNLVTYGVVVNG 196

Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPD 534
           L K G    A  L  +M       ++V +N +I    K R+   AL L+++M+  G  P+
Sbjct: 197 LCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPN 256

Query: 535 KVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYE 594
            VTYS ++  L   G   +A  + ++M  K   P+   +  L+D + K G   +A + Y+
Sbjct: 257 VVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYD 316

Query: 595 AMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTY-TLLLSCCTEA 653
            M++  + P++ T NSL++ F    +L  A  + + M++    P + TY TL+   C   
Sbjct: 317 DMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSK 376

Query: 654 R 654
           R
Sbjct: 377 R 377



 Score =  126 bits (317), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 102/396 (25%), Positives = 175/396 (44%), Gaps = 24/396 (6%)

Query: 363 YTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQ 422
           +  ++  + + ++F  +  L ++M R      + TYN LI+ + R + ++ AL +  +M 
Sbjct: 50  FNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILINCFCRRSQISLALALLGKMM 109

Query: 423 VVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQ 482
            +G EP  VT  +L++ +     +  A+ +  +M   G  PDT T++ +I+ L       
Sbjct: 110 KLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKAS 169

Query: 483 AAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVM 542
            A  L   MV +GC PNLVTY +++    K  +   AL L   M+ A  E D V ++ ++
Sbjct: 170 EAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTII 229

Query: 543 EVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLR 602
           + L    ++D+A  +F EM  K   P+   Y  L+      G    A +    M++  + 
Sbjct: 230 DSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKIN 289

Query: 603 PNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGFC 662
           PN+ T N+L+ AF++ G+  +A  L   M+   + P + TY  L++           GFC
Sbjct: 290 PNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVN-----------GFC 338

Query: 663 HELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSED-----RE-SKRGLVDAV 716
                        F++S     PD       +  F +    ED     RE S RGLV   
Sbjct: 339 MHDRLDKAKQMFEFMVS-KDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDT 397

Query: 717 VDF------LHKSGLKEEAGSVWEVAAQKNVYPDAV 746
           V +      L   G  + A  V++      V PD +
Sbjct: 398 VTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIM 433



 Score =  119 bits (297), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 71/270 (26%), Positives = 137/270 (50%)

Query: 362 TYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQM 421
           T+  ++    +  +F    KL D M++    P++ TYN L++ +   + L++A  +F+ M
Sbjct: 294 TFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFM 353

Query: 422 QVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHL 481
               C PD VTY TLI    K+  ++   +++++M   GL  DT TY+ +I  L   G  
Sbjct: 354 VSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDC 413

Query: 482 QAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIV 541
             A ++F +MV+ G  P+++TY+I++         + AL+++  MQ +  + D   Y+ +
Sbjct: 414 DNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTM 473

Query: 542 MEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGL 601
           +E +   G +D+   +F  +  K   P+   Y  ++        +++A+   + M + G 
Sbjct: 474 IEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGP 533

Query: 602 RPNVPTCNSLLSAFLRVGQLSDAYHLLQGM 631
            PN  T N+L+ A LR G  + +  L++ M
Sbjct: 534 LPNSGTYNTLIRAHLRDGDKAASAELIREM 563



 Score = 99.4 bits (246), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 65/221 (29%), Positives = 105/221 (47%)

Query: 359 DEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVF 418
           D  TY T++    ++++     +L  +M   G   + VTY  LI         + A  VF
Sbjct: 361 DVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVF 420

Query: 419 KQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKA 478
           KQM   G  PD +TY  L+D     G L+ A++++  MQ + +  D + Y+ +I  + KA
Sbjct: 421 KQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKA 480

Query: 479 GHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTY 538
           G +     LFC +  +G  PN+VTYN MI+     R  Q A  L + M+  G  P+  TY
Sbjct: 481 GKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTY 540

Query: 539 SIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDL 579
           + ++      G    +  +  EMR   +V D    GL+ ++
Sbjct: 541 NTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLVANM 581



 Score = 95.1 bits (235), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 63/200 (31%), Positives = 101/200 (50%), Gaps = 1/200 (0%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           G   D  TYTT++  L          K+  QMV DG  P+++TY+ L+        L +A
Sbjct: 392 GLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKA 451

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
           L+VF  MQ    + D   Y T+I+   KAG +D   D++  +   G+ P+  TY+ +I+ 
Sbjct: 452 LEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISG 511

Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPD 534
           L     LQ A+ L  +M   G +PN  TYN +I    +  +  ++ +L R+M++  F  D
Sbjct: 512 LCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGD 571

Query: 535 KVTYSIVMEVLGHCGYLDEA 554
             T  +V  +L H G LD++
Sbjct: 572 ASTIGLVANML-HDGRLDKS 590



 Score = 94.7 bits (234), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 62/245 (25%), Positives = 118/245 (48%), Gaps = 1/245 (0%)

Query: 411 LNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSV 470
           L++A+ +F  M      P  V +  L+   AK    DV + + +KMQ   +    +TY++
Sbjct: 28  LDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNI 87

Query: 471 IINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAG 530
           +INC  +   +  A  L  +M+  G  P++VT + ++      +    A+ L   M   G
Sbjct: 88  LINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMG 147

Query: 531 FEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAW 590
           + PD +T++ ++  L       EA A+   M ++   P+   YG++V+   K G+   A 
Sbjct: 148 YRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLAL 207

Query: 591 EWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSC- 649
                M  A +  +V   N+++ +  +   + DA +L + M   G++P++ TY+ L+SC 
Sbjct: 208 NLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCL 267

Query: 650 CTEAR 654
           C+  R
Sbjct: 268 CSYGR 272


>gi|242043130|ref|XP_002459436.1| hypothetical protein SORBIDRAFT_02g004626 [Sorghum bicolor]
 gi|241922813|gb|EER95957.1| hypothetical protein SORBIDRAFT_02g004626 [Sorghum bicolor]
          Length = 684

 Score =  158 bits (400), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 93/294 (31%), Positives = 154/294 (52%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           G   D HTY  ++  L +  + G+  ++LD+M   GC PN+VTY+ L+HS+ R    ++A
Sbjct: 346 GCPPDVHTYNILMHGLCKLGRCGSAVRMLDEMEEKGCAPNIVTYSTLLHSFCRNGMWDDA 405

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
             +  QM   G   +   Y  +I    K G LD AM + ++M++ G  PD  TY+ II  
Sbjct: 406 RAMLDQMSAKGFSMNSQGYNGIIYALGKDGKLDEAMRLVQEMKSQGCKPDICTYNTIIYH 465

Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPD 534
           L     +  A  +F  ++ +G + N +TYN +I     +  +Q  L+L  +M   G   D
Sbjct: 466 LCNNDQMDEAEHIFGNLLEEGVVANGITYNTLIHALLHSGRWQEGLRLANEMVLHGCPLD 525

Query: 535 KVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYE 594
            V+Y+ +++ L   G +D +  +  EM  K   P+   Y +L++   KAG VR A E  +
Sbjct: 526 VVSYNGLIKALCKEGNVDRSMMLLEEMMTKGIKPNNFSYNMLINELCKAGKVRDALELSK 585

Query: 595 AMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
            ML  GL P++ T N+L++   +VG    A +LL+ + N  + P + TY +L+S
Sbjct: 586 EMLNQGLTPDIVTYNTLINGLCKVGWTHAALNLLEKLPNENVHPDIVTYNILIS 639



 Score =  140 bits (354), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 89/285 (31%), Positives = 138/285 (48%), Gaps = 1/285 (0%)

Query: 364 TTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQV 423
           T + G L   +      +L + M   GC P+V TYN L+H   +      A+ +  +M+ 
Sbjct: 321 TVIRGCLAEGK-LARATELYEMMGSKGCPPDVHTYNILMHGLCKLGRCGSAVRMLDEMEE 379

Query: 424 VGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQA 483
            GC P+ VTY TL+    + G  D A  M  +M A G S ++  Y+ II  LGK G L  
Sbjct: 380 KGCAPNIVTYSTLLHSFCRNGMWDDARAMLDQMSAKGFSMNSQGYNGIIYALGKDGKLDE 439

Query: 484 AHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVME 543
           A +L  EM +QGC P++ TYN +I           A  ++ ++   G   + +TY+ ++ 
Sbjct: 440 AMRLVQEMKSQGCKPDICTYNTIIYHLCNNDQMDEAEHIFGNLLEEGVVANGITYNTLIH 499

Query: 544 VLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRP 603
            L H G   E   +  EM       D   Y  L+    K GNV ++    E M+  G++P
Sbjct: 500 ALLHSGRWQEGLRLANEMVLHGCPLDVVSYNGLIKALCKEGNVDRSMMLLEEMMTKGIKP 559

Query: 604 NVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
           N  + N L++   + G++ DA  L + MLN GL P + TY  L++
Sbjct: 560 NNFSYNMLINELCKAGKVRDALELSKEMLNQGLTPDIVTYNTLIN 604



 Score =  123 bits (309), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 75/228 (32%), Positives = 119/228 (52%), Gaps = 4/228 (1%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           +  G K D  TY T++  L    Q      +   ++ +G   N +TYN LIH+   +   
Sbjct: 448 KSQGCKPDICTYNTIIYHLCNNDQMDEAEHIFGNLLEEGVVANGITYNTLIHALLHSGRW 507

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
            E L +  +M + GC  D V+Y  LI    K G +D +M + ++M   G+ P+ F+Y+++
Sbjct: 508 QEGLRLANEMVLHGCPLDVVSYNGLIKALCKEGNVDRSMMLLEEMMTKGIKPNNFSYNML 567

Query: 472 INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF 531
           IN L KAG ++ A +L  EM+NQG  P++VTYN +I    K     +AL L   + N   
Sbjct: 568 INELCKAGKVRDALELSKEMLNQGLTPDIVTYNTLINGLCKVGWTHAALNLLEKLPNENV 627

Query: 532 EPDKVTYSIVMEVLGHCG--YLDEAEAVFAEMRRKNWVPDEPVYGLLV 577
            PD VTY+I++    HC    LD+A  +  +      VP+E  +G++V
Sbjct: 628 HPDIVTYNILIS--WHCKVRLLDDASMLLDKAVSGGIVPNERTWGMMV 673



 Score =  121 bits (304), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 107/424 (25%), Positives = 189/424 (44%), Gaps = 24/424 (5%)

Query: 355 GFKHDEHTYTTMV-GI--LGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           G   D +T+  +V G+  LG  R+     +L+D+M+  GC P+VVTY  L+    R    
Sbjct: 245 GCAADVNTFNDVVLGLCGLGHVREAA---RLVDRMMMHGCTPSVVTYGFLLRGLCRTRQA 301

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
           +EA  +  ++     E + V   T+I      G L  A ++Y+ M + G  PD  TY+++
Sbjct: 302 DEAYAMLGRVP----EVNVVMLNTVIRGCLAEGKLARATELYEMMGSKGCPPDVHTYNIL 357

Query: 472 INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF 531
           ++ L K G   +A ++  EM  +GC PN+VTY+ ++    +   +  A  +   M   GF
Sbjct: 358 MHGLCKLGRCGSAVRMLDEMEEKGCAPNIVTYSTLLHSFCRNGMWDDARAMLDQMSAKGF 417

Query: 532 EPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWE 591
             +   Y+ ++  LG  G LDEA  +  EM+ +   PD   Y  ++        + +A  
Sbjct: 418 SMNSQGYNGIIYALGKDGKLDEAMRLVQEMKSQGCKPDICTYNTIIYHLCNNDQMDEAEH 477

Query: 592 WYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYT-LLLSCC 650
            +  +L+ G+  N  T N+L+ A L  G+  +   L   M+  G    + +Y  L+ + C
Sbjct: 478 IFGNLLEEGVVANGITYNTLIHALLHSGRWQEGLRLANEMVLHGCPLDVVSYNGLIKALC 537

Query: 651 TEARSPYDMGFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRESKR 710
            E      M    E+M     P +     + +       VRD +    EM++       +
Sbjct: 538 KEGNVDRSMMLLEEMMTKGIKPNNFSYNMLINELCKAGKVRDALELSKEMLN-------Q 590

Query: 711 GLVDAVVDF------LHKSGLKEEAGSVWEVAAQKNVYPDAVKEKGMSYWLINLHVMSDG 764
           GL   +V +      L K G    A ++ E    +NV+PD V    +  W   + ++ D 
Sbjct: 591 GLTPDIVTYNTLINGLCKVGWTHAALNLLEKLPNENVHPDIVTYNILISWHCKVRLLDDA 650

Query: 765 TAVI 768
           + ++
Sbjct: 651 SMLL 654



 Score = 98.6 bits (244), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 82/336 (24%), Positives = 133/336 (39%), Gaps = 31/336 (9%)

Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLI 402
           AL   + + R+        +Y  ++  L RA        L  +M+RD   P   T+    
Sbjct: 128 ALHLLDQMPRRFAVTPSFRSYNAVLSTLARADCHADALLLYRRMLRDRVPPTTFTFGVAA 187

Query: 403 HSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLS 462
            +  R     +AL + + M   GC PD V Y T+I      G +  A  +  +M   G +
Sbjct: 188 RALCRLGRARDALALLRGMARHGCVPDAVLYQTVIHALVAQGGVAEAATLLDEMLLMGCA 247

Query: 463 PDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSAL-- 520
            D  T++ ++  L   GH++ A +L   M+  GC P++VTY  ++    + R    A   
Sbjct: 248 ADVNTFNDVVLGLCGLGHVREAARLVDRMMMHGCTPSVVTYGFLLRGLCRTRQADEAYAM 307

Query: 521 -----------------------------KLYRDMQNAGFEPDKVTYSIVMEVLGHCGYL 551
                                        +LY  M + G  PD  TY+I+M  L   G  
Sbjct: 308 LGRVPEVNVVMLNTVIRGCLAEGKLARATELYEMMGSKGCPPDVHTYNILMHGLCKLGRC 367

Query: 552 DEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSL 611
             A  +  EM  K   P+   Y  L+  + + G    A    + M   G   N    N +
Sbjct: 368 GSAVRMLDEMEEKGCAPNIVTYSTLLHSFCRNGMWDDARAMLDQMSAKGFSMNSQGYNGI 427

Query: 612 LSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
           + A  + G+L +A  L+Q M + G KP + TY  ++
Sbjct: 428 IYALGKDGKLDEAMRLVQEMKSQGCKPDICTYNTII 463


>gi|357480587|ref|XP_003610579.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355511634|gb|AES92776.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 706

 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 125/552 (22%), Positives = 246/552 (44%), Gaps = 49/552 (8%)

Query: 333 VLKQLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQ 392
           ++  +++  V      +++R++    +   Y   + +  + +      K+  +M++ G +
Sbjct: 154 IINNMENSVVVPFVLQYVQRKSIPTREVILYNVTLKVFRKCKDLDGAEKVFGEMLQRGVK 213

Query: 393 PNVVTYNRLIHSYGRANYL-NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMD 451
           P+ VT++ +I S  R+ YL ++A++ F++M + GCEPD VTY  +ID + KAG +D+A++
Sbjct: 214 PDNVTFSTII-SCARSCYLPDKAVEWFEKMPLFGCEPDDVTYSVMIDSYGKAGDIDMALN 272

Query: 452 MYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQA 511
           +Y + +      +  T+S +I   G AG+      ++ EM   G  PNLV YN ++    
Sbjct: 273 LYDRARTEKWRIEPATFSTLIKMYGVAGNYDGCLNVYEEMKALGVKPNLVVYNTLLDAMG 332

Query: 512 KARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEP 571
           +A+    A  +Y++M N    P++ TY+ ++   G   + ++A  V+ EMR K    +  
Sbjct: 333 RAKRPWQARTIYKEMINNDILPNRATYASLLHAYGRARFCEDALVVYREMREKEMDLNTH 392

Query: 572 VYGLLVDLWGKAGNVRKAWEWYEAMLQAG-LRPNVPTCNSLLSAFLRVGQLSDAYHLLQG 630
           +Y  L+ +    G    A+E +E M  +    P+  T +SL++ +   G++S+A  ++  
Sbjct: 393 LYNSLLAMCADVGYTDLAFEIFEDMKSSDTCSPDSWTFSSLITIYSCSGRVSEAERMMNE 452

Query: 631 MLNLGLKPSLQTYTLLLSCCTEARSP----------YDMG------FCHELMAV------ 668
           M+  G +P++   T L+ C  +A+             DMG      FC  L+ V      
Sbjct: 453 MIESGFEPTIFVLTSLVQCYGKAKRTDDVVKTFNQLLDMGIEPDDRFCGCLLNVMTQTPK 512

Query: 669 -----------SGHPAHMFLLSMPSPGPDGQNVRDHVGSF----LEMMHSEDRESKRGLV 713
                        +P   F++     G +G       G F    LE+  S     KR   
Sbjct: 513 EELGKLIDCVEKANPKLSFVVRYLVEGLEGD------GEFRKEALELFSSITDGVKRAFC 566

Query: 714 DAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAVKEKGMSYWLINLHVMSDGTAVIALSRT 773
           ++++D      L + A  + ++     +Y D ++ +  + W + L  +S G ++ A    
Sbjct: 567 NSLIDLCINLDLLDRARVLLDLGLTLEIYTD-IQSRSQTQWSLILRGLSVGASLTAFHVW 625

Query: 774 LAWFRKQMLISGVGPSRIDIVTGWGRRSRVTGTSLVRQAVQELLHMFSFPFFTENGNSGC 833
           +    K        P  + I TG G+  R +   L    ++  +     PF      +G 
Sbjct: 626 INDLSKAFESGEDLPPLLGIHTGHGKH-RYSDKGLA-GVIESHMKELDAPFRESPDKAGW 683

Query: 834 FVGCGEPLNKWL 845
           F+     +  W+
Sbjct: 684 FLTTQVAVKSWM 695


>gi|357494939|ref|XP_003617758.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355519093|gb|AET00717.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 906

 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 116/481 (24%), Positives = 203/481 (42%), Gaps = 46/481 (9%)

Query: 304 ILRQWKWGPLAEEALGNTNYSMDAYQANQVLKQLQDHTVALGFFNWLRRQAGFKHDEHTY 363
           +L    WGP  EEAL   +          V+K+L+D  VA  +F W+ R+    H    Y
Sbjct: 77  VLENGLWGPDVEEALNVFDEMSQPEVIVGVMKRLKDVNVAFQYFRWVERKTQQAHCPEVY 136

Query: 364 TTMVGILGRARQFGAINKLLDQMVRDG--------------------------------- 390
              + ++ R R    + ++L++M   G                                 
Sbjct: 137 NAFLMVMARTRNLDYLEQILEEMSVAGFGLSNHVSVELVASFVKSHKLKEAFGVIEMMRK 196

Query: 391 --CQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDV 448
              +P    Y  LI +   AN  +  L +F QMQ +G E +   + TL+ + A+ G +D 
Sbjct: 197 FKFRPAFSAYTTLIGALSAANRPDPMLTLFHQMQEIGYEANVHLFTTLVRVFAREGRIDA 256

Query: 449 AMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIA 508
           A+ +  +M++   + D   Y+V I+C GK G +  A + F EM  QG +P+ VTY  +I 
Sbjct: 257 ALSLLDEMKSNSFTADLVLYNVCIDCFGKVGKVDMAWKFFHEMKAQGLVPDDVTYTTLIG 316

Query: 509 LQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVP 568
           +  KAR    A++L+ ++      P    Y+ ++   G  G  DEA ++    +RK  +P
Sbjct: 317 VLCKARRLDEAVELFEELDLNRSVPCVYAYNTMIMGYGSAGKFDEAYSLLERQKRKGCIP 376

Query: 569 DEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLL 628
               Y  ++   G+ G V +A   ++ M Q    PN+ T N L+    + G+L  A  + 
Sbjct: 377 SVIAYNCILTCLGRKGKVEEALRIHDEMRQDA-APNLTTYNILIDMLCKAGELEAALKVQ 435

Query: 629 QGMLNLGLKPSLQTYTLLLSCCTEARSPYD-----MGFCHELMAVSGHPAHMFLLSMPSP 683
             M   GL P++ T  +++    +A+   +     +G  H+   V    +  F   +   
Sbjct: 436 DTMKEAGLFPNIMTVNIMIDRLCKAQKLDEACSIFLGLDHK---VCSPDSRTFCSLIDGL 492

Query: 684 GPDGQNVRDHVGSFLEMMHSEDRESKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYP 743
           G  G+   D   S  E M   D+     +  +++    K G KE+   +++    +   P
Sbjct: 493 GRRGR--VDDAYSLYEKMLDSDQIPNVVVYTSLIQNFFKCGRKEDGHKIYKEMVHRGCSP 550

Query: 744 D 744
           D
Sbjct: 551 D 551



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 97/337 (28%), Positives = 162/337 (48%), Gaps = 36/337 (10%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           ++ G++ + H +TT+V +  R  +  A   LLD+M  +    ++V YN  I  +G+   +
Sbjct: 230 QEIGYEANVHLFTTLVRVFAREGRIDAALSLLDEMKSNSFTADLVLYNVCIDCFGKVGKV 289

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKM--------------- 456
           + A   F +M+  G  PD VTY TLI +  KA  LD A+++++++               
Sbjct: 290 DMAWKFFHEMKAQGLVPDDVTYTTLIGVLCKARRLDEAVELFEELDLNRSVPCVYAYNTM 349

Query: 457 --------------------QAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGC 496
                               +  G  P    Y+ I+ CLG+ G ++ A ++  EM  Q  
Sbjct: 350 IMGYGSAGKFDEAYSLLERQKRKGCIPSVIAYNCILTCLGRKGKVEEALRIHDEM-RQDA 408

Query: 497 IPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEA 556
            PNL TYNI+I +  KA   ++ALK+   M+ AG  P+ +T +I+++ L     LDEA +
Sbjct: 409 APNLTTYNILIDMLCKAGELEAALKVQDTMKEAGLFPNIMTVNIMIDRLCKAQKLDEACS 468

Query: 557 VFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFL 616
           +F  +  K   PD   +  L+D  G+ G V  A+  YE ML +   PNV    SL+  F 
Sbjct: 469 IFLGLDHKVCSPDSRTFCSLIDGLGRRGRVDDAYSLYEKMLDSDQIPNVVVYTSLIQNFF 528

Query: 617 RVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEA 653
           + G+  D + + + M++ G  P L      + C  +A
Sbjct: 529 KCGRKEDGHKIYKEMVHRGCSPDLMLLNSYMDCVFKA 565



 Score =  151 bits (381), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 85/286 (29%), Positives = 150/286 (52%)

Query: 362 TYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQM 421
           TY  ++ +L +A +  A  K+ D M   G  PN++T N +I    +A  L+EA  +F  +
Sbjct: 414 TYNILIDMLCKAGELEAALKVQDTMKEAGLFPNIMTVNIMIDRLCKAQKLDEACSIFLGL 473

Query: 422 QVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHL 481
               C PD  T+C+LID   + G +D A  +Y+KM  +   P+   Y+ +I    K G  
Sbjct: 474 DHKVCSPDSRTFCSLIDGLGRRGRVDDAYSLYEKMLDSDQIPNVVVYTSLIQNFFKCGRK 533

Query: 482 QAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIV 541
           +  H+++ EMV++GC P+L+  N  +    KA   +    L+ +++  G  PD  +YSI+
Sbjct: 534 EDGHKIYKEMVHRGCSPDLMLLNSYMDCVFKAGEVEKGRALFEEIKAQGLVPDVRSYSIL 593

Query: 542 MEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGL 601
           +  L   G+  E   +F EM+ +    D   Y  ++D + K+G V KA++  E M   GL
Sbjct: 594 IHGLVKAGFSRETYKLFYEMKEQGLHLDVLAYNTVIDGFCKSGKVDKAYQLLEEMKTKGL 653

Query: 602 RPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
           +P V T  S++    ++ +L +AY L +   ++G+  ++  Y+ L+
Sbjct: 654 QPTVVTYGSVVDGLAKIDRLDEAYMLFEEAKSIGVDLNVVIYSSLI 699



 Score =  145 bits (367), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 101/372 (27%), Positives = 176/372 (47%), Gaps = 72/372 (19%)

Query: 342 VALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQ-------------------------- 375
           +A  FF+ ++ Q G   D+ TYTT++G+L +AR+                          
Sbjct: 291 MAWKFFHEMKAQ-GLVPDDVTYTTLIGVLCKARRLDEAVELFEELDLNRSVPCVYAYNTM 349

Query: 376 ---FGAINK------LLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGC 426
              +G+  K      LL++  R GC P+V+ YN ++   GR   + EAL +  +M+    
Sbjct: 350 IMGYGSAGKFDEAYSLLERQKRKGCIPSVIAYNCILTCLGRKGKVEEALRIHDEMRQ-DA 408

Query: 427 EPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGL------------------------- 461
            P+  TY  LID+  KAG L+ A+ +   M+ AGL                         
Sbjct: 409 APNLTTYNILIDMLCKAGELEAALKVQDTMKEAGLFPNIMTVNIMIDRLCKAQKLDEACS 468

Query: 462 ----------SPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQA 511
                     SPD+ T+  +I+ LG+ G +  A+ L+ +M++   IPN+V Y  +I    
Sbjct: 469 IFLGLDHKVCSPDSRTFCSLIDGLGRRGRVDDAYSLYEKMLDSDQIPNVVVYTSLIQNFF 528

Query: 512 KARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEP 571
           K    +   K+Y++M + G  PD +  +  M+ +   G +++  A+F E++ +  VPD  
Sbjct: 529 KCGRKEDGHKIYKEMVHRGCSPDLMLLNSYMDCVFKAGEVEKGRALFEEIKAQGLVPDVR 588

Query: 572 VYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGM 631
            Y +L+    KAG  R+ ++ +  M + GL  +V   N+++  F + G++  AY LL+ M
Sbjct: 589 SYSILIHGLVKAGFSRETYKLFYEMKEQGLHLDVLAYNTVIDGFCKSGKVDKAYQLLEEM 648

Query: 632 LNLGLKPSLQTY 643
              GL+P++ TY
Sbjct: 649 KTKGLQPTVVTY 660



 Score =  138 bits (347), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 77/273 (28%), Positives = 136/273 (49%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           ++ G   D   Y T++    ++ +     +LL++M   G QP VVTY  ++    + + L
Sbjct: 614 KEQGLHLDVLAYNTVIDGFCKSGKVDKAYQLLEEMKTKGLQPTVVTYGSVVDGLAKIDRL 673

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
           +EA  +F++ + +G + + V Y +LID   K G +D A  + +++   GL+P+++T++ +
Sbjct: 674 DEAYMLFEEAKSIGVDLNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNSYTWNCL 733

Query: 472 INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF 531
           ++ L KA  +  A   F  M N  C PN +TY+IMI      R +  A   +++MQ  G 
Sbjct: 734 LDALVKAEEIDEAQVCFQNMKNLKCSPNAMTYSIMINGLCMIRKFNKAFVFWQEMQKQGL 793

Query: 532 EPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWE 591
           +P+ +TY+ ++  L   G + EA  +F   +    VPD   Y  +++    A     A+ 
Sbjct: 794 KPNNITYTTMIAGLAKAGNVMEARGLFDRFKASGGVPDSACYNAMIEGLSSANKAMDAYI 853

Query: 592 WYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDA 624
            +E     G R N  TC  LL A  +   L  A
Sbjct: 854 VFEETRLKGCRVNSKTCVVLLDALHKADCLEQA 886



 Score =  125 bits (314), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 91/357 (25%), Positives = 163/357 (45%), Gaps = 2/357 (0%)

Query: 380 NKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDI 439
           +K+  +MV  GC P+++  N  +    +A  + +   +F++++  G  PD  +Y  LI  
Sbjct: 537 HKIYKEMVHRGCSPDLMLLNSYMDCVFKAGEVEKGRALFEEIKAQGLVPDVRSYSILIHG 596

Query: 440 HAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPN 499
             KAGF      ++ +M+  GL  D   Y+ +I+   K+G +  A+QL  EM  +G  P 
Sbjct: 597 LVKAGFSRETYKLFYEMKEQGLHLDVLAYNTVIDGFCKSGKVDKAYQLLEEMKTKGLQPT 656

Query: 500 LVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFA 559
           +VTY  ++   AK      A  L+ + ++ G + + V YS +++  G  G +DEA  +  
Sbjct: 657 VVTYGSVVDGLAKIDRLDEAYMLFEEAKSIGVDLNVVIYSSLIDGFGKVGRIDEAYLILE 716

Query: 560 EMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVG 619
           E+ +K   P+   +  L+D   KA  + +A   ++ M      PN  T + +++    + 
Sbjct: 717 ELMQKGLTPNSYTWNCLLDALVKAEEIDEAQVCFQNMKNLKCSPNAMTYSIMINGLCMIR 776

Query: 620 QLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDM-GFCHELMAVSGHPAHMFLL 678
           + + A+   Q M   GLKP+  TYT +++   +A +  +  G      A  G P      
Sbjct: 777 KFNKAFVFWQEMQKQGLKPNNITYTTMIAGLAKAGNVMEARGLFDRFKASGGVPDSACYN 836

Query: 679 SMPSPGPDGQNVRDHVGSFLEMMHSEDRESKRGLVDAVVDFLHKSGLKEEAGSVWEV 735
           +M           D    F E      R + +  V  ++D LHK+   E+A  V  V
Sbjct: 837 AMIEGLSSANKAMDAYIVFEETRLKGCRVNSKTCV-VLLDALHKADCLEQAAIVGAV 892



 Score =  115 bits (288), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 79/326 (24%), Positives = 157/326 (48%), Gaps = 8/326 (2%)

Query: 345 GFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHS 404
             F  ++ Q G   D  +Y+ ++  L +A       KL  +M   G   +V+ YN +I  
Sbjct: 573 ALFEEIKAQ-GLVPDVRSYSILIHGLVKAGFSRETYKLFYEMKEQGLHLDVLAYNTVIDG 631

Query: 405 YGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPD 464
           + ++  +++A  + ++M+  G +P  VTY +++D  AK   LD A  ++++ ++ G+  +
Sbjct: 632 FCKSGKVDKAYQLLEEMKTKGLQPTVVTYGSVVDGLAKIDRLDEAYMLFEEAKSIGVDLN 691

Query: 465 TFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYR 524
              YS +I+  GK G +  A+ +  E++ +G  PN  T+N ++    KA     A   ++
Sbjct: 692 VVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNSYTWNCLLDALVKAEEIDEAQVCFQ 751

Query: 525 DMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAG 584
           +M+N    P+ +TYSI++  L      ++A   + EM+++   P+   Y  ++    KAG
Sbjct: 752 NMKNLKCSPNAMTYSIMINGLCMIRKFNKAFVFWQEMQKQGLKPNNITYTTMIAGLAKAG 811

Query: 585 NVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYT 644
           NV +A   ++    +G  P+    N+++       +  DAY + +     G + + +T  
Sbjct: 812 NVMEARGLFDRFKASGGVPDSACYNAMIEGLSSANKAMDAYIVFEETRLKGCRVNSKTCV 871

Query: 645 LLLSCCTEARSPYDMGFCHELMAVSG 670
           +LL    +A        C E  A+ G
Sbjct: 872 VLLDALHKAD-------CLEQAAIVG 890



 Score = 84.0 bits (206), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 51/201 (25%), Positives = 100/201 (49%)

Query: 363 YTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQ 422
           Y++++   G+  +      +L+++++ G  PN  T+N L+ +  +A  ++EA   F+ M+
Sbjct: 695 YSSLIDGFGKVGRIDEAYLILEELMQKGLTPNSYTWNCLLDALVKAEEIDEAQVCFQNMK 754

Query: 423 VVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQ 482
            + C P+ +TY  +I+        + A   +++MQ  GL P+  TY+ +I  L KAG++ 
Sbjct: 755 NLKCSPNAMTYSIMINGLCMIRKFNKAFVFWQEMQKQGLKPNNITYTTMIAGLAKAGNVM 814

Query: 483 AAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVM 542
            A  LF      G +P+   YN MI   + A     A  ++ + +  G   +  T  +++
Sbjct: 815 EARGLFDRFKASGGVPDSACYNAMIEGLSSANKAMDAYIVFEETRLKGCRVNSKTCVVLL 874

Query: 543 EVLGHCGYLDEAEAVFAEMRR 563
           + L     L++A  V A +R 
Sbjct: 875 DALHKADCLEQAAIVGAVLRE 895


>gi|449520323|ref|XP_004167183.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Cucumis sativus]
          Length = 605

 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 119/495 (24%), Positives = 230/495 (46%), Gaps = 27/495 (5%)

Query: 334 LKQLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQP 393
           L +++ ++     +N +R  +G   D  T   ++  L    + G    ++  ++R G  P
Sbjct: 106 LAKIKHYSQVFYLYNQMRL-SGISPDCCTLNILLNCLCNVNRVGEGLAVMAGILRRGYIP 164

Query: 394 NVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMY 453
           ++VTY  LI      + +++A  +F +MQ +GC P+ +TY TL+    + G + +A+ ++
Sbjct: 165 DIVTYTTLIKGLCMEHRISKAALLFTRMQKLGCTPNAITYGTLMKGLCRTGNISIALKLH 224

Query: 454 KKM------QAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMI 507
           ++M            P   +YS+II+ L K      A  LF EM  QG  P +++Y  +I
Sbjct: 225 QEMLNDSSLYGINFKPVVISYSIIIDALCKDRREDEARDLFEEMKVQGMTPTVISYTSLI 284

Query: 508 ALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWV 567
                   ++ A +L+ +M N G +P+ VT++++++VL   G + EA+ +   M ++  V
Sbjct: 285 HGFCCGGKWEEAKRLFNEMVNQGVQPNVVTFNVLIDVLCKEGKVIEAKDLLEVMIQRGIV 344

Query: 568 PDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHL 627
           P+   Y  L++ +   G++  A E + +M   G  P+V     L++ + +  ++ +A  L
Sbjct: 345 PNLLTYNSLIEGFCLVGDLNSARELFVSMPSKGCEPDVICYTVLINGYCKTSKVEEAMKL 404

Query: 628 LQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGFCHELMAVSGHPAHMFLLSMPSPGPDG 687
             GML +G +P ++TY  LL+   +     D      +M V G P  +++  +   G   
Sbjct: 405 YNGMLQVGKRPDVKTYGALLTGLFQGGKVGDAKKLFGVMKVYGIPGDLYIYGIFLNGLCK 464

Query: 688 QNVRDHVGSFLEMMHSEDRESKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAVK 747
                        + S + +      + ++D L K+G  E A  ++E   Q+ + PD V 
Sbjct: 465 NGCLFEAMELFNKLKSYNIKLDIECFNCLIDGLCKAGKLETAWELFEKLPQEELQPDVVT 524

Query: 748 EKGMSYWLINLHVMSDGTAVIALSRTLAWFRKQMLISGVGPSRI---DIVTGWGRRSRVT 804
                 + I +H    G  V+   +    F+K M  +G  P +I    ++ G+    ++ 
Sbjct: 525 ------YNIMIHEFCRGGQVV---KANILFQK-MEKNGCTPDKITYATLIRGFFESKKL- 573

Query: 805 GTSLVRQAVQELLHM 819
                 + V ELLHM
Sbjct: 574 ------EKVVELLHM 582



 Score =  103 bits (256), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 62/246 (25%), Positives = 117/246 (47%)

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
           Q G   +  TY +++          +  +L   M   GC+P+V+ Y  LI+ Y + + + 
Sbjct: 340 QRGIVPNLLTYNSLIEGFCLVGDLNSARELFVSMPSKGCEPDVICYTVLINGYCKTSKVE 399

Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
           EA+ ++  M  VG  PD  TY  L+    + G +  A  ++  M+  G+  D + Y + +
Sbjct: 400 EAMKLYNGMLQVGKRPDVKTYGALLTGLFQGGKVGDAKKLFGVMKVYGIPGDLYIYGIFL 459

Query: 473 NCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFE 532
           N L K G L  A +LF ++ +     ++  +N +I    KA   ++A +L+  +     +
Sbjct: 460 NGLCKNGCLFEAMELFNKLKSYNIKLDIECFNCLIDGLCKAGKLETAWELFEKLPQEELQ 519

Query: 533 PDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEW 592
           PD VTY+I++      G + +A  +F +M +    PD+  Y  L+  + ++  + K  E 
Sbjct: 520 PDVVTYNIMIHEFCRGGQVVKANILFQKMEKNGCTPDKITYATLIRGFFESKKLEKVVEL 579

Query: 593 YEAMLQ 598
              M+Q
Sbjct: 580 LHMMVQ 585



 Score = 85.9 bits (211), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 73/283 (25%), Positives = 125/283 (44%), Gaps = 12/283 (4%)

Query: 473 NCLGKAGHLQA--AHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAG 530
           NC  K G++ A  A Q F  M+     P L ++  +++  AK ++Y     LY  M+ +G
Sbjct: 69  NC--KTGNITATQAFQFFHLMMYSNPTPPLSSFTHLLSGLAKIKHYSQVFYLYNQMRLSG 126

Query: 531 FEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAW 590
             PD  T +I++  L +   + E  AV A + R+ ++PD   Y  L+        + KA 
Sbjct: 127 ISPDCCTLNILLNCLCNVNRVGEGLAVMAGILRRGYIPDIVTYTTLIKGLCMEHRISKAA 186

Query: 591 EWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLN------LGLKPSLQTYT 644
             +  M + G  PN  T  +L+    R G +S A  L Q MLN      +  KP + +Y+
Sbjct: 187 LLFTRMQKLGCTPNAITYGTLMKGLCRTGNISIALKLHQEMLNDSSLYGINFKPVVISYS 246

Query: 645 LLLSCCTEARSPYDMGFCHELMAVSGH-PAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHS 703
           +++    + R   +     E M V G  P  +   S+      G    +    F EM++ 
Sbjct: 247 IIIDALCKDRREDEARDLFEEMKVQGMTPTVISYTSLIHGFCCGGKWEEAKRLFNEMVN- 305

Query: 704 EDRESKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAV 746
           +  +      + ++D L K G   EA  + EV  Q+ + P+ +
Sbjct: 306 QGVQPNVVTFNVLIDVLCKEGKVIEAKDLLEVMIQRGIVPNLL 348



 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 35/123 (28%), Positives = 66/123 (53%), Gaps = 1/123 (0%)

Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLI 402
           A+  FN L+     K D   +  ++  L +A +     +L +++ ++  QP+VVTYN +I
Sbjct: 471 AMELFNKLK-SYNIKLDIECFNCLIDGLCKAGKLETAWELFEKLPQEELQPDVVTYNIMI 529

Query: 403 HSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLS 462
           H + R   + +A  +F++M+  GC PD++TY TLI    ++  L+  +++   M    +S
Sbjct: 530 HEFCRGGQVVKANILFQKMEKNGCTPDKITYATLIRGFFESKKLEKVVELLHMMVQRDVS 589

Query: 463 PDT 465
            D 
Sbjct: 590 LDV 592



 Score = 47.8 bits (112), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 34/141 (24%), Positives = 68/141 (48%), Gaps = 2/141 (1%)

Query: 355 GFKHDEHTYTTMV-GILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNE 413
           G   D + Y   + G+      F A+ +L +++     + ++  +N LI    +A  L  
Sbjct: 447 GIPGDLYIYGIFLNGLCKNGCLFEAM-ELFNKLKSYNIKLDIECFNCLIDGLCKAGKLET 505

Query: 414 ALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIIN 473
           A ++F+++     +PD VTY  +I    + G +  A  +++KM+  G +PD  TY+ +I 
Sbjct: 506 AWELFEKLPQEELQPDVVTYNIMIHEFCRGGQVVKANILFQKMEKNGCTPDKITYATLIR 565

Query: 474 CLGKAGHLQAAHQLFCEMVNQ 494
              ++  L+   +L   MV +
Sbjct: 566 GFFESKKLEKVVELLHMMVQR 586


>gi|20219038|gb|AAM15782.1|AC104428_3 Putative indole-3-acetate beta-glucosyltransferase [Oryza sativa
           Japonica Group]
 gi|108706351|gb|ABF94146.1| Rf1 protein, mitochondrial precursor, putative [Oryza sativa
           Japonica Group]
 gi|125585039|gb|EAZ25703.1| hypothetical protein OsJ_09536 [Oryza sativa Japonica Group]
          Length = 648

 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 117/438 (26%), Positives = 203/438 (46%), Gaps = 16/438 (3%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           G K    TY +++  L R+  +    ++  +M   G  P+V ++  LI  + R   + EA
Sbjct: 221 GLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDVRSFTILIGGFCRVGEIEEA 280

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
           L ++K+M+  G +PD V++  LI + A+ G +D AM   ++M+  GL PD   Y+++I  
Sbjct: 281 LKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREMRCFGLVPDGVIYTMVIGG 340

Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPD 534
             +AG +  A ++  EMV  GC+P++VTYN ++    K R    A  L  +M+  G  PD
Sbjct: 341 FCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGLLNEMRERGVPPD 400

Query: 535 KVTYSIVMEVLGHC--GYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEW 592
             T++ ++   G+C  G LD+A  +F  M  +   PD   Y  L+D   + G++ KA + 
Sbjct: 401 LCTFTTLIH--GYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKANDL 458

Query: 593 YEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTY-TLLLSCCT 651
           ++ M    + PN  T + L+ +    GQ+ DA+  L  M+N G+ P++ TY +++   C 
Sbjct: 459 WDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGYCR 518

Query: 652 EARSPYDMGFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRESKRG 711
                    F  ++M     P  +   +    G   ++        L MM  E  +    
Sbjct: 519 SGNVSKGQKFLQKMMVNKVSP-DLITYNTLIHGYIKEDKMHDAFKLLNMMEKEKVQPDVV 577

Query: 712 LVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAVKEKGMSYWLINLHVMSDGTAVIALS 771
             + +++     G  +EAG ++E    K + PD      M    IN HV +        S
Sbjct: 578 TYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYMSM----INGHVTAGN------S 627

Query: 772 RTLAWFRKQMLISGVGPS 789
           +       +ML  G  P 
Sbjct: 628 KEAFQLHDEMLQRGFAPD 645



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 96/332 (28%), Positives = 169/332 (50%), Gaps = 5/332 (1%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           R  G K D  +++ ++G+  R  +       L +M   G  P+ V Y  +I  + RA  +
Sbjct: 288 RHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREMRCFGLVPDGVIYTMVIGGFCRAGLM 347

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
           ++AL V  +M   GC PD VTY TL++   K   L  A  +  +M+  G+ PD  T++ +
Sbjct: 348 SDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGLLNEMRERGVPPDLCTFTTL 407

Query: 472 INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF 531
           I+     G L  A QLF  M+NQ   P++VTYN +I    +  +   A  L+ DM +   
Sbjct: 408 IHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREI 467

Query: 532 EPDKVTYSIVMEVLGHC--GYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKA 589
            P+ VTYSI+++   HC  G +++A     EM  K  +P+   Y  ++  + ++GNV K 
Sbjct: 468 FPNHVTYSILID--SHCEKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKG 525

Query: 590 WEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSC 649
            ++ + M+   + P++ T N+L+  +++  ++ DA+ LL  M    ++P + TY +L++ 
Sbjct: 526 QKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDAFKLLNMMEKEKVQPDVVTYNMLING 585

Query: 650 CTEARSPYDMGFCHELMAVSG-HPAHMFLLSM 680
            +   +  + G+  E M   G  P     +SM
Sbjct: 586 FSVHGNVQEAGWIFEKMCAKGIEPDRYTYMSM 617



 Score =  136 bits (342), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 79/264 (29%), Positives = 140/264 (53%), Gaps = 1/264 (0%)

Query: 392 QPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMD 451
           + N  T N ++H+Y +A   ++   V  +M+     PD VT+  ++D   +AG  + AM 
Sbjct: 153 EVNTYTLNIMVHNYCKALEFDKVDAVISEMEKRCVFPDVVTHNVMVDARFRAGDAEAAMA 212

Query: 452 MYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQA 511
           +   M + GL P   TY+ ++  L ++G    A ++F EM + G  P++ ++ I+I    
Sbjct: 213 LVDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDVRSFTILIGGFC 272

Query: 512 KARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEP 571
           +    + ALK+Y++M++ G +PD V++S ++ +    G +D A A   EMR    VPD  
Sbjct: 273 RVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREMRCFGLVPDGV 332

Query: 572 VYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGM 631
           +Y +++  + +AG +  A    + M+  G  P+V T N+LL+   +  +L DA  LL  M
Sbjct: 333 IYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGLLNEM 392

Query: 632 LNLGLKPSLQTYTLLL-SCCTEAR 654
              G+ P L T+T L+   C E +
Sbjct: 393 RERGVPPDLCTFTTLIHGYCIEGK 416



 Score =  133 bits (335), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 109/467 (23%), Positives = 207/467 (44%), Gaps = 49/467 (10%)

Query: 361 HTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQ 420
           +T   MV    +A +F  ++ ++ +M +    P+VVT+N ++ +  RA     A+ +   
Sbjct: 157 YTLNIMVHNYCKALEFDKVDAVISEMEKRCVFPDVVTHNVMVDARFRAGDAEAAMALVDS 216

Query: 421 MQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGH 480
           M   G +P  VTY +++    ++G  D A +++K+M   G++PD  +++++I    + G 
Sbjct: 217 MVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDVRSFTILIGGFCRVGE 276

Query: 481 LQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSI 540
           ++ A +++ EM ++G  P+LV+++ +I L A+      A+   R+M+  G  PD V Y++
Sbjct: 277 IEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREMRCFGLVPDGVIYTM 336

Query: 541 VM-----------------EVLGHCGYLD-------------------EAEAVFAEMRRK 564
           V+                 E++G CG L                    +AE +  EMR +
Sbjct: 337 VIGGFCRAGLMSDALRVRDEMVG-CGCLPDVVTYNTLLNGLCKERRLLDAEGLLNEMRER 395

Query: 565 NWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDA 624
              PD   +  L+  +   G + KA + ++ ML   LRP++ T N+L+    R G L  A
Sbjct: 396 GVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKA 455

Query: 625 YHLLQGMLNLGLKPSLQTYTLLL-SCCTEARSPYDMGFCHELMAVSGHPAHMFLLSMPSP 683
             L   M +  + P+  TY++L+ S C + +     GF  E++     P  M   S+   
Sbjct: 456 NDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSIIKG 515

Query: 684 GPDGQNVRDHVGSFLEMMHSEDRESKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYP 743
                NV      FL+ M            + ++    K     +A  +  +  ++ V P
Sbjct: 516 YCRSGNVSKG-QKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDAFKLLNMMEKEKVQP 574

Query: 744 DAVKEKGMSYWLINLHVMSDGTAVIALSRTLAWFRKQMLISGVGPSR 790
           D V            +++ +G +V    +   W  ++M   G+ P R
Sbjct: 575 DVV----------TYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDR 611



 Score =  133 bits (334), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 98/343 (28%), Positives = 153/343 (44%), Gaps = 52/343 (15%)

Query: 339 DHTVALGFFNWLR--RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVV 396
           DH +A     +LR  R  G   D   YT ++G   RA       ++ D+MV  GC P+VV
Sbjct: 313 DHAMA-----YLREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVV 367

Query: 397 TYN-----------------------------------RLIHSYGRANYLNEALDVFKQM 421
           TYN                                    LIH Y     L++AL +F  M
Sbjct: 368 TYNTLLNGLCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTM 427

Query: 422 QVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHL 481
                 PD VTY TLID   + G LD A D++  M +  + P+  TYS++I+   + G +
Sbjct: 428 LNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQV 487

Query: 482 QAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIV 541
           + A     EM+N+G +PN++TYN +I    ++ N     K  + M      PD +TY+ +
Sbjct: 488 EDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTL 547

Query: 542 MEVLGHCGYLDE-----AEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAM 596
           +      GY+ E     A  +   M ++   PD   Y +L++ +   GNV++A   +E M
Sbjct: 548 IH-----GYIKEDKMHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKM 602

Query: 597 LQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPS 639
              G+ P+  T  S+++  +  G   +A+ L   ML  G  P 
Sbjct: 603 CAKGIEPDRYTYMSMINGHVTAGNSKEAFQLHDEMLQRGFAPD 645



 Score =  112 bits (280), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 80/341 (23%), Positives = 157/341 (46%), Gaps = 2/341 (0%)

Query: 407 RANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTF 466
           RA + + A D ++ +     E +  T   ++  + KA   D    +  +M+   + PD  
Sbjct: 133 RAGWPHLAADAYRLVFSSNSEVNTYTLNIMVHNYCKALEFDKVDAVISEMEKRCVFPDVV 192

Query: 467 TYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDM 526
           T++V+++   +AG  +AA  L   MV++G  P +VTYN ++    ++  +  A +++++M
Sbjct: 193 THNVMVDARFRAGDAEAAMALVDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEM 252

Query: 527 QNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNV 586
            + G  PD  +++I++      G ++EA  ++ EMR +   PD   +  L+ L+ + G +
Sbjct: 253 DDFGVAPDVRSFTILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKM 312

Query: 587 RKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTY-TL 645
             A  +   M   GL P+      ++  F R G +SDA  +   M+  G  P + TY TL
Sbjct: 313 DHAMAYLREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTL 372

Query: 646 LLSCCTEARSPYDMGFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSED 705
           L   C E R     G  +E M   G P  +   +    G   +   D      + M ++ 
Sbjct: 373 LNGLCKERRLLDAEGLLNE-MRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQR 431

Query: 706 RESKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAV 746
                   + ++D + + G  ++A  +W+    + ++P+ V
Sbjct: 432 LRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHV 472



 Score = 89.7 bits (221), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 64/228 (28%), Positives = 106/228 (46%), Gaps = 1/228 (0%)

Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLI 402
           AL  F+ +  Q   + D  TY T++  + R       N L D M      PN VTY+ LI
Sbjct: 420 ALQLFDTMLNQR-LRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILI 478

Query: 403 HSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLS 462
            S+     + +A     +M   G  P+ +TY ++I  + ++G +       +KM    +S
Sbjct: 479 DSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVS 538

Query: 463 PDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKL 522
           PD  TY+ +I+   K   +  A +L   M  +   P++VTYN++I   +   N Q A  +
Sbjct: 539 PDLITYNTLIHGYIKEDKMHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWI 598

Query: 523 YRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDE 570
           +  M   G EPD+ TY  ++      G   EA  +  EM ++ + PD+
Sbjct: 599 FEKMCAKGIEPDRYTYMSMINGHVTAGNSKEAFQLHDEMLQRGFAPDD 646


>gi|115450929|ref|NP_001049065.1| Os03g0165100 [Oryza sativa Japonica Group]
 gi|113547536|dbj|BAF10979.1| Os03g0165100 [Oryza sativa Japonica Group]
          Length = 695

 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 112/409 (27%), Positives = 195/409 (47%), Gaps = 10/409 (2%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           G K    TY +++  L R+  +    ++  +M   G  P+V ++  LI  + R   + EA
Sbjct: 160 GLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDVRSFTILIGGFCRVGEIEEA 219

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
           L ++K+M+  G +PD V++  LI + A+ G +D AM   ++M+  GL PD   Y+++I  
Sbjct: 220 LKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREMRCFGLVPDGVIYTMVIGG 279

Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPD 534
             +AG +  A ++  EMV  GC+P++VTYN ++    K R    A  L  +M+  G  PD
Sbjct: 280 FCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGLLNEMRERGVPPD 339

Query: 535 KVTYSIVMEVLGHC--GYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEW 592
             T++ ++   G+C  G LD+A  +F  M  +   PD   Y  L+D   + G++ KA + 
Sbjct: 340 LCTFTTLIH--GYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKANDL 397

Query: 593 YEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTY-TLLLSCCT 651
           ++ M    + PN  T + L+ +    GQ+ DA+  L  M+N G+ P++ TY +++   C 
Sbjct: 398 WDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGYCR 457

Query: 652 EARSPYDMGFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRESKRG 711
                    F  ++M     P  +   +    G   ++        L MM  E  +    
Sbjct: 458 SGNVSKGQKFLQKMMVNKVSP-DLITYNTLIHGYIKEDKMHDAFKLLNMMEKEKVQPDVV 516

Query: 712 LVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAVKEKGMSYWLINLHV 760
             + +++     G  +EAG ++E    K + PD      M    IN HV
Sbjct: 517 TYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYMSM----INGHV 561



 Score =  147 bits (372), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 96/332 (28%), Positives = 169/332 (50%), Gaps = 5/332 (1%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           R  G K D  +++ ++G+  R  +       L +M   G  P+ V Y  +I  + RA  +
Sbjct: 227 RHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREMRCFGLVPDGVIYTMVIGGFCRAGLM 286

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
           ++AL V  +M   GC PD VTY TL++   K   L  A  +  +M+  G+ PD  T++ +
Sbjct: 287 SDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGLLNEMRERGVPPDLCTFTTL 346

Query: 472 INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF 531
           I+     G L  A QLF  M+NQ   P++VTYN +I    +  +   A  L+ DM +   
Sbjct: 347 IHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREI 406

Query: 532 EPDKVTYSIVMEVLGHC--GYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKA 589
            P+ VTYSI+++   HC  G +++A     EM  K  +P+   Y  ++  + ++GNV K 
Sbjct: 407 FPNHVTYSILID--SHCEKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKG 464

Query: 590 WEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSC 649
            ++ + M+   + P++ T N+L+  +++  ++ DA+ LL  M    ++P + TY +L++ 
Sbjct: 465 QKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDAFKLLNMMEKEKVQPDVVTYNMLING 524

Query: 650 CTEARSPYDMGFCHELMAVSG-HPAHMFLLSM 680
            +   +  + G+  E M   G  P     +SM
Sbjct: 525 FSVHGNVQEAGWIFEKMCAKGIEPDRYTYMSM 556



 Score =  136 bits (342), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 79/264 (29%), Positives = 140/264 (53%), Gaps = 1/264 (0%)

Query: 392 QPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMD 451
           + N  T N ++H+Y +A   ++   V  +M+     PD VT+  ++D   +AG  + AM 
Sbjct: 92  EVNTYTLNIMVHNYCKALEFDKVDAVISEMEKRCVFPDVVTHNVMVDARFRAGDAEAAMA 151

Query: 452 MYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQA 511
           +   M + GL P   TY+ ++  L ++G    A ++F EM + G  P++ ++ I+I    
Sbjct: 152 LVDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDVRSFTILIGGFC 211

Query: 512 KARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEP 571
           +    + ALK+Y++M++ G +PD V++S ++ +    G +D A A   EMR    VPD  
Sbjct: 212 RVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREMRCFGLVPDGV 271

Query: 572 VYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGM 631
           +Y +++  + +AG +  A    + M+  G  P+V T N+LL+   +  +L DA  LL  M
Sbjct: 272 IYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGLLNEM 331

Query: 632 LNLGLKPSLQTYTLLL-SCCTEAR 654
              G+ P L T+T L+   C E +
Sbjct: 332 RERGVPPDLCTFTTLIHGYCIEGK 355



 Score =  134 bits (336), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 109/467 (23%), Positives = 207/467 (44%), Gaps = 49/467 (10%)

Query: 361 HTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQ 420
           +T   MV    +A +F  ++ ++ +M +    P+VVT+N ++ +  RA     A+ +   
Sbjct: 96  YTLNIMVHNYCKALEFDKVDAVISEMEKRCVFPDVVTHNVMVDARFRAGDAEAAMALVDS 155

Query: 421 MQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGH 480
           M   G +P  VTY +++    ++G  D A +++K+M   G++PD  +++++I    + G 
Sbjct: 156 MVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDVRSFTILIGGFCRVGE 215

Query: 481 LQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSI 540
           ++ A +++ EM ++G  P+LV+++ +I L A+      A+   R+M+  G  PD V Y++
Sbjct: 216 IEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREMRCFGLVPDGVIYTM 275

Query: 541 VM-----------------EVLGHCGYLD-------------------EAEAVFAEMRRK 564
           V+                 E++G CG L                    +AE +  EMR +
Sbjct: 276 VIGGFCRAGLMSDALRVRDEMVG-CGCLPDVVTYNTLLNGLCKERRLLDAEGLLNEMRER 334

Query: 565 NWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDA 624
              PD   +  L+  +   G + KA + ++ ML   LRP++ T N+L+    R G L  A
Sbjct: 335 GVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKA 394

Query: 625 YHLLQGMLNLGLKPSLQTYTLLL-SCCTEARSPYDMGFCHELMAVSGHPAHMFLLSMPSP 683
             L   M +  + P+  TY++L+ S C + +     GF  E++     P  M   S+   
Sbjct: 395 NDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSIIKG 454

Query: 684 GPDGQNVRDHVGSFLEMMHSEDRESKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYP 743
                NV      FL+ M            + ++    K     +A  +  +  ++ V P
Sbjct: 455 YCRSGNVSKG-QKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDAFKLLNMMEKEKVQP 513

Query: 744 DAVKEKGMSYWLINLHVMSDGTAVIALSRTLAWFRKQMLISGVGPSR 790
           D V            +++ +G +V    +   W  ++M   G+ P R
Sbjct: 514 DVV----------TYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDR 550



 Score =  132 bits (332), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 87/312 (27%), Positives = 152/312 (48%), Gaps = 7/312 (2%)

Query: 339 DHTVALGFFNWLR--RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVV 396
           DH +A     +LR  R  G   D   YT ++G   RA       ++ D+MV  GC P+VV
Sbjct: 252 DHAMA-----YLREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVV 306

Query: 397 TYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKM 456
           TYN L++   +   L +A  +  +M+  G  PD  T+ TLI  +   G LD A+ ++  M
Sbjct: 307 TYNTLLNGLCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTM 366

Query: 457 QAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNY 516
               L PD  TY+ +I+ + + G L  A+ L+ +M ++   PN VTY+I+I    +    
Sbjct: 367 LNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQV 426

Query: 517 QSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLL 576
           + A     +M N G  P+ +TY+ +++     G + + +    +M      PD   Y  L
Sbjct: 427 EDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTL 486

Query: 577 VDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGL 636
           +  + K   +  A++    M +  ++P+V T N L++ F   G + +A  + + M   G+
Sbjct: 487 IHGYIKEDKMHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGI 546

Query: 637 KPSLQTYTLLLS 648
           +P   TY  +++
Sbjct: 547 EPDRYTYMSMIN 558



 Score =  112 bits (280), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 80/341 (23%), Positives = 157/341 (46%), Gaps = 2/341 (0%)

Query: 407 RANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTF 466
           RA + + A D ++ +     E +  T   ++  + KA   D    +  +M+   + PD  
Sbjct: 72  RAGWPHLAADAYRLVFSSNSEVNTYTLNIMVHNYCKALEFDKVDAVISEMEKRCVFPDVV 131

Query: 467 TYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDM 526
           T++V+++   +AG  +AA  L   MV++G  P +VTYN ++    ++  +  A +++++M
Sbjct: 132 THNVMVDARFRAGDAEAAMALVDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEM 191

Query: 527 QNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNV 586
            + G  PD  +++I++      G ++EA  ++ EMR +   PD   +  L+ L+ + G +
Sbjct: 192 DDFGVAPDVRSFTILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKM 251

Query: 587 RKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTY-TL 645
             A  +   M   GL P+      ++  F R G +SDA  +   M+  G  P + TY TL
Sbjct: 252 DHAMAYLREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTL 311

Query: 646 LLSCCTEARSPYDMGFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSED 705
           L   C E R     G  +E M   G P  +   +    G   +   D      + M ++ 
Sbjct: 312 LNGLCKERRLLDAEGLLNE-MRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQR 370

Query: 706 RESKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAV 746
                   + ++D + + G  ++A  +W+    + ++P+ V
Sbjct: 371 LRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHV 411



 Score = 87.0 bits (214), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 51/171 (29%), Positives = 84/171 (49%)

Query: 362 TYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQM 421
           TY+ ++       Q       LD+M+  G  PN++TYN +I  Y R+  +++     ++M
Sbjct: 412 TYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKM 471

Query: 422 QVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHL 481
            V    PD +TY TLI  + K   +  A  +   M+   + PD  TY+++IN     G++
Sbjct: 472 MVNKVSPDLITYNTLIHGYIKEDKMHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNV 531

Query: 482 QAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFE 532
           Q A  +F +M  +G  P+  TY  MI     A N + A +L+ +M   G E
Sbjct: 532 QEAGWIFEKMCAKGIEPDRYTYMSMINGHVTAGNSKEAFQLHDEMLQRGKE 582


>gi|30694913|ref|NP_191463.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|218525907|sp|Q9LYT2.2|PP287_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g59040
 gi|332646344|gb|AEE79865.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 583

 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 91/349 (26%), Positives = 174/349 (49%), Gaps = 6/349 (1%)

Query: 334 LKQLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQP 393
            KQL+   +      WLR Q  +   E  +  ++   G+   F    ++L  + + G  P
Sbjct: 113 FKQLKKWNLVSEILEWLRYQNWWNFSEIDFLMLITAYGKLGNFNGAERVLSVLSKMGSTP 172

Query: 394 NVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMY 453
           NV++Y  L+ SYGR    N A  +F++MQ  G EP  +TY  ++    +      A +++
Sbjct: 173 NVISYTALMESYGRGGKCNNAEAIFRRMQSSGPEPSAITYQIILKTFVEGDKFKEAEEVF 232

Query: 454 KKM---QAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQ 510
           + +   + + L PD   Y ++I    KAG+ + A ++F  MV +G   + VTYN +++ +
Sbjct: 233 ETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTVTYNSLMSFE 292

Query: 511 AKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDE 570
               +Y+   K+Y  MQ +  +PD V+Y+++++  G     +EA +VF EM      P  
Sbjct: 293 T---SYKEVSKIYDQMQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTH 349

Query: 571 PVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQG 630
             Y +L+D +  +G V +A   +++M +  + P++ +  ++LSA++    +  A    + 
Sbjct: 350 KAYNILLDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKR 409

Query: 631 MLNLGLKPSLQTYTLLLSCCTEARSPYDMGFCHELMAVSGHPAHMFLLS 679
           +   G +P++ TY  L+    +A     M   +E M +SG  A+  +L+
Sbjct: 410 IKVDGFEPNIVTYGTLIKGYAKANDVEKMMEVYEKMRLSGIKANQTILT 458



 Score =  120 bits (300), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 68/256 (26%), Positives = 127/256 (49%), Gaps = 13/256 (5%)

Query: 349 WLRRQAG-FKHDEHTYTTMVG------------ILGRARQFGAINKLLDQMVRDGCQPNV 395
           ++ ++AG ++     +++MVG            ++     +  ++K+ DQM R   QP+V
Sbjct: 255 YMYKKAGNYEKARKVFSSMVGKGVPQSTVTYNSLMSFETSYKEVSKIYDQMQRSDIQPDV 314

Query: 396 VTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKK 455
           V+Y  LI +YGRA    EAL VF++M   G  P    Y  L+D  A +G ++ A  ++K 
Sbjct: 315 VSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKS 374

Query: 456 MQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARN 515
           M+   + PD ++Y+ +++    A  ++ A + F  +   G  PN+VTY  +I   AKA +
Sbjct: 375 MRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYAKAND 434

Query: 516 YQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGL 575
            +  +++Y  M+ +G + ++   + +M+  G C     A   + EM      PD+    +
Sbjct: 435 VEKMMEVYEKMRLSGIKANQTILTTIMDASGRCKNFGSALGWYKEMESCGVPPDQKAKNV 494

Query: 576 LVDLWGKAGNVRKAWE 591
           L+ L      + +A E
Sbjct: 495 LLSLASTQDELEEAKE 510



 Score =  114 bits (285), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 69/276 (25%), Positives = 133/276 (48%), Gaps = 3/276 (1%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           +++  K D+  Y  M+ +  +A  +    K+   MV  G   + VTYN L+      +Y 
Sbjct: 239 KKSPLKPDQKMYHMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTVTYNSLMSF--ETSY- 295

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
            E   ++ QMQ    +PD V+Y  LI  + +A   + A+ ++++M  AG+ P    Y+++
Sbjct: 296 KEVSKIYDQMQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNIL 355

Query: 472 INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF 531
           ++    +G ++ A  +F  M      P+L +Y  M++    A + + A K ++ ++  GF
Sbjct: 356 LDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGF 415

Query: 532 EPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWE 591
           EP+ VTY  +++       +++   V+ +MR      ++ +   ++D  G+  N   A  
Sbjct: 416 EPNIVTYGTLIKGYAKANDVEKMMEVYEKMRLSGIKANQTILTTIMDASGRCKNFGSALG 475

Query: 592 WYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHL 627
           WY+ M   G+ P+    N LLS      +L +A  L
Sbjct: 476 WYKEMESCGVPPDQKAKNVLLSLASTQDELEEAKEL 511



 Score = 89.7 bits (221), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 63/280 (22%), Positives = 127/280 (45%), Gaps = 41/280 (14%)

Query: 468 YSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQ 527
           + ++I   GK G+   A ++   +   G  PN+++Y  ++    +     +A  ++R MQ
Sbjct: 142 FLMLITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRRMQ 201

Query: 528 NAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEM---RRKNWVPDEPVYGLLVDLWGKAG 584
           ++G EP  +TY I+++         EAE VF  +   ++    PD+ +Y +++ ++ KAG
Sbjct: 202 SSGPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAG 261

Query: 585 NVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYT 644
           N  KA + + +M+  G+  +  T NSL+S      ++S  Y  +Q      ++P + +Y 
Sbjct: 262 NYEKARKVFSSMVGKGVPQSTVTYNSLMSFETSYKEVSKIYDQMQ---RSDIQPDVVSYA 318

Query: 645 LLLSCCTEARSPYDMGFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSE 704
           LL+     AR         E ++V                            F EM+ + 
Sbjct: 319 LLIKAYGRARRE------EEALSV----------------------------FEEMLDAG 344

Query: 705 DRESKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPD 744
            R + +   + ++D    SG+ E+A +V++   +  ++PD
Sbjct: 345 VRPTHKAY-NILLDAFAISGMVEQAKTVFKSMRRDRIFPD 383


>gi|296081530|emb|CBI20053.3| unnamed protein product [Vitis vinifera]
          Length = 634

 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 93/313 (29%), Positives = 163/313 (52%), Gaps = 17/313 (5%)

Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMV------GILGRARQFGAINKLLDQMVRDGCQPNVV 396
           A G F+ +  + G   +  TY T++      G L RA  +       D+MV+ G  P+V 
Sbjct: 316 ASGLFDKMV-EIGLVPNAVTYNTLIDGYCNKGDLERAFSYR------DEMVKKGIMPSVS 368

Query: 397 TYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKM 456
           TYN L+H+      + EA D+ K+M+  G  PD +TY  LI+ +++ G    A D++ +M
Sbjct: 369 TYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKKAFDLHNEM 428

Query: 457 QAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNY 516
            + G+ P   TY+ +I  L +   ++ A  LF ++++QG  P+++ +N M+       N 
Sbjct: 429 LSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMVDGHCANGNV 488

Query: 517 QSALKLYRDMQNAGFEPDKVTYSIVMEVLGHC--GYLDEAEAVFAEMRRKNWVPDEPVYG 574
           + A  L ++M      PD+VT++ +M+  G C  G ++EA  +  EM+R+   PD   Y 
Sbjct: 489 ERAFMLLKEMDRKSVPPDEVTFNTLMQ--GRCREGKVEEARMLLDEMKRRGIKPDHISYN 546

Query: 575 LLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNL 634
            L+  +G+ G+++ A+   + ML  G  P + T N+L+    +  +   A  LL+ M+N 
Sbjct: 547 TLISGYGRRGDIKDAFRVRDEMLSIGFNPTLLTYNALIKCLCKNQEGDLAEELLKEMVNK 606

Query: 635 GLKPSLQTYTLLL 647
           G+ P   TY  L+
Sbjct: 607 GISPDDSTYLSLI 619



 Score =  157 bits (398), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 91/300 (30%), Positives = 154/300 (51%), Gaps = 4/300 (1%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           R  G + D +TY +++  + +  +    + L D+MV  G  PN VTYN LI  Y     L
Sbjct: 289 RVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDL 348

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
             A     +M   G  P   TY  L+      G +  A DM K+M+  G+ PD  TY+++
Sbjct: 349 ERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNIL 408

Query: 472 INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF 531
           IN   + G+ + A  L  EM+++G  P  VTY  +I + ++    + A  L+  + + G 
Sbjct: 409 INGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGV 468

Query: 532 EPDKVTYSIVMEVLGHC--GYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKA 589
            PD + ++ +++  GHC  G ++ A  +  EM RK+  PDE  +  L+    + G V +A
Sbjct: 469 SPDVIMFNAMVD--GHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEA 526

Query: 590 WEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSC 649
               + M + G++P+  + N+L+S + R G + DA+ +   ML++G  P+L TY  L+ C
Sbjct: 527 RMLLDEMKRRGIKPDHISYNTLISGYGRRGDIKDAFRVRDEMLSIGFNPTLLTYNALIKC 586



 Score =  139 bits (350), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 93/378 (24%), Positives = 177/378 (46%), Gaps = 19/378 (5%)

Query: 349 WLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRA 408
           ++ ++ G      T   M+ +  +  +      L  +M R      V T+N +++   + 
Sbjct: 181 YMMKEKGIVPKIETCNDMLSLFLKLNRMEMAWVLYAEMFRLRISSTVYTFNIMVNVLCKE 240

Query: 409 NYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTY 468
             L +A +    M+ +G +P+ V+Y T+I  ++  G ++ A  +   M+  G+ PD++TY
Sbjct: 241 GKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTY 300

Query: 469 SVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQN 528
             +I+ + K G L+ A  LF +MV  G +PN VTYN +I       + + A     +M  
Sbjct: 301 GSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVK 360

Query: 529 AGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRK 588
            G  P   TY++++  L   G + EA+ +  EMR+K  +PD   Y +L++ + + GN +K
Sbjct: 361 KGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKK 420

Query: 589 AWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
           A++ +  ML  G+ P   T  SL+    R  ++ +A  L + +L+ G+ P +  +  ++ 
Sbjct: 421 AFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMVD 480

Query: 649 CCTEARSPYDMGFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRES 708
                      G C      +G+    F+L       D ++V     +F  +M    RE 
Sbjct: 481 -----------GHC-----ANGNVERAFMLLKEM---DRKSVPPDEVTFNTLMQGRCREG 521

Query: 709 KRGLVDAVVDFLHKSGLK 726
           K      ++D + + G+K
Sbjct: 522 KVEEARMLLDEMKRRGIK 539



 Score =  129 bits (324), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 109/465 (23%), Positives = 205/465 (44%), Gaps = 24/465 (5%)

Query: 396 VTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKK 455
           + ++ L+         +EA   F  M+  G  P   T   ++ +  K   +++A  +Y +
Sbjct: 158 IVFDLLVRVCCELRRADEAFKCFYMMKEKGIVPKIETCNDMLSLFLKLNRMEMAWVLYAE 217

Query: 456 MQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARN 515
           M    +S   +T+++++N L K G L+ A +    M   G  PN+V+YN +I   +   N
Sbjct: 218 MFRLRISSTVYTFNIMVNVLCKEGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGN 277

Query: 516 YQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGL 575
            + A ++   M+  G EPD  TY  ++  +   G L+EA  +F +M     VP+   Y  
Sbjct: 278 IEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNT 337

Query: 576 LVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLG 635
           L+D +   G++ +A+ + + M++ G+ P+V T N L+ A    G++ +A  +++ M   G
Sbjct: 338 LIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKG 397

Query: 636 LKPSLQTYTLLL---SCCTEARSPYDMGFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRD 692
           + P   TY +L+   S C  A+  +D+   +E+++    P H+   S+       +N   
Sbjct: 398 IIPDAITYNILINGYSRCGNAKKAFDLH--NEMLSKGIEPTHVTYTSLIYV-LSRRNRMK 454

Query: 693 HVGSFLEMMHSEDRESKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAVKEKGMS 752
                 E +  +       + +A+VD    +G  E A  + +   +K+V PD V      
Sbjct: 455 EADDLFEKILDQGVSPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPDEV------ 508

Query: 753 YWLINLHVMSDGTAVIALSRTLAWFRKQMLISGVGPSRID---IVTGWGRRSRVTGTSLV 809
                 + +  G               +M   G+ P  I    +++G+GRR  +     V
Sbjct: 509 ----TFNTLMQGRCREGKVEEARMLLDEMKRRGIKPDHISYNTLISGYGRRGDIKDAFRV 564

Query: 810 RQAVQELLHM-FSFPFFTENGNSGCFVGCGE-PLNKWLLQSYVDR 852
           R    E+L + F+    T N    C     E  L + LL+  V++
Sbjct: 565 R---DEMLSIGFNPTLLTYNALIKCLCKNQEGDLAEELLKEMVNK 606



 Score =  108 bits (269), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 62/230 (26%), Positives = 113/230 (49%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           R+ G   D  TY  ++    R         L ++M+  G +P  VTY  LI+   R N +
Sbjct: 394 RKKGIIPDAITYNILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRM 453

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
            EA D+F+++   G  PD + +  ++D H   G ++ A  + K+M    + PD  T++ +
Sbjct: 454 KEADDLFEKILDQGVSPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTL 513

Query: 472 INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF 531
           +    + G ++ A  L  EM  +G  P+ ++YN +I+   +  + + A ++  +M + GF
Sbjct: 514 MQGRCREGKVEEARMLLDEMKRRGIKPDHISYNTLISGYGRRGDIKDAFRVRDEMLSIGF 573

Query: 532 EPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWG 581
            P  +TY+ +++ L      D AE +  EM  K   PD+  Y  L++  G
Sbjct: 574 NPTLLTYNALIKCLCKNQEGDLAEELLKEMVNKGISPDDSTYLSLIEGMG 623



 Score =  103 bits (257), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 82/325 (25%), Positives = 149/325 (45%), Gaps = 10/325 (3%)

Query: 330 ANQVLKQLQDHTVALG--FFNWL---RRQAGFKHDEHTYTTMVGILGRARQFGAINKLLD 384
           A Q+LKQ+    +A     F+ L   R +   K     +  +V +    R+     K   
Sbjct: 123 ALQLLKQVMGTRIATNRELFDELTLSRDRLSVK-SSIVFDLLVRVCCELRRADEAFKCFY 181

Query: 385 QMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAG 444
            M   G  P + T N ++  + + N +  A  ++ +M  +       T+  ++++  K G
Sbjct: 182 MMKEKGIVPKIETCNDMLSLFLKLNRMEMAWVLYAEMFRLRISSTVYTFNIMVNVLCKEG 241

Query: 445 FLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYN 504
            L  A +    M+  G  P+  +Y+ II+     G+++ A ++   M  +G  P+  TY 
Sbjct: 242 KLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYG 301

Query: 505 IMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHC--GYLDEAEAVFAEMR 562
            +I+   K    + A  L+  M   G  P+ VTY+ +++  G+C  G L+ A +   EM 
Sbjct: 302 SLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLID--GYCNKGDLERAFSYRDEMV 359

Query: 563 RKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLS 622
           +K  +P    Y LLV      G + +A +  + M + G+ P+  T N L++ + R G   
Sbjct: 360 KKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAK 419

Query: 623 DAYHLLQGMLNLGLKPSLQTYTLLL 647
            A+ L   ML+ G++P+  TYT L+
Sbjct: 420 KAFDLHNEMLSKGIEPTHVTYTSLI 444



 Score =  100 bits (249), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 55/202 (27%), Positives = 105/202 (51%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           G +    TYT+++ +L R  +    + L ++++  G  P+V+ +N ++  +     +  A
Sbjct: 432 GIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMVDGHCANGNVERA 491

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
             + K+M      PD VT+ TL+    + G ++ A  +  +M+  G+ PD  +Y+ +I+ 
Sbjct: 492 FMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKRRGIKPDHISYNTLISG 551

Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPD 534
            G+ G ++ A ++  EM++ G  P L+TYN +I    K +    A +L ++M N G  PD
Sbjct: 552 YGRRGDIKDAFRVRDEMLSIGFNPTLLTYNALIKCLCKNQEGDLAEELLKEMVNKGISPD 611

Query: 535 KVTYSIVMEVLGHCGYLDEAEA 556
             TY  ++E +G+   L E  A
Sbjct: 612 DSTYLSLIEGMGNVDTLVEDNA 633



 Score = 71.6 bits (174), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 71/348 (20%), Positives = 133/348 (38%), Gaps = 60/348 (17%)

Query: 465 TFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYR 524
           +  + +++    +      A + F  M  +G +P + T N M++L  K    + A  LY 
Sbjct: 157 SIVFDLLVRVCCELRRADEAFKCFYMMKEKGIVPKIETCNDMLSLFLKLNRMEMAWVLYA 216

Query: 525 DMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAG 584
           +M          T++I++ VL   G L +A      M    + P+   Y  ++  +   G
Sbjct: 217 EMFRLRISSTVYTFNIMVNVLCKEGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRG 276

Query: 585 NVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYT 644
           N+  A    +AM   G+ P+  T  SL+S   + G+L +A  L   M+ +GL P+  TY 
Sbjct: 277 NIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYN 336

Query: 645 LLLSCCTEARSPYDMGFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSE 704
            L+            G+C++                              G         
Sbjct: 337 TLID-----------GYCNK------------------------------GDLERAFSYR 355

Query: 705 DRESKRGLVDAV------VDFLHKSGLKEEAGSVWEVAAQKNVYPDAVKEKGMSYWLINL 758
           D   K+G++ +V      V  L   G   EA  + +   +K + PDA          I  
Sbjct: 356 DEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDA----------ITY 405

Query: 759 HVMSDGTAVIALSRTLAWFRKQMLISGVGPSRI---DIVTGWGRRSRV 803
           +++ +G +    ++       +ML  G+ P+ +    ++    RR+R+
Sbjct: 406 NILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRM 453


>gi|147834641|emb|CAN60904.1| hypothetical protein VITISV_016343 [Vitis vinifera]
          Length = 580

 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 91/300 (30%), Positives = 153/300 (51%), Gaps = 4/300 (1%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           R  G + D +TY +++  + +  +    + L D+MV  G  PN VTYN LI  Y     L
Sbjct: 235 RVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDL 294

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
             A     +M   G  P   TY  L+      G +  A DM K+M+  G+ PD  TY+++
Sbjct: 295 ERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNIL 354

Query: 472 INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF 531
           IN   + G+ + A  L  EM+++G  P  VTY  +I + ++    + A  L+  + + G 
Sbjct: 355 INGYSRCGNAKRAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGV 414

Query: 532 EPDKVTYSIVMEVLGHC--GYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKA 589
            PD + ++ +++  GHC  G ++ A  +  EM RK+  PDE  +  L+    + G V +A
Sbjct: 415 SPDVIMFNAMID--GHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEA 472

Query: 590 WEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSC 649
               + M   G++P+  + N+L+S + R G + DA+ +   ML++G  P+L TY  L+ C
Sbjct: 473 RMLLDEMKXRGIKPDHISYNTLISGYGRRGDIKDAFXVRDEMLSIGFNPTLLTYNALIKC 532



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 93/313 (29%), Positives = 162/313 (51%), Gaps = 17/313 (5%)

Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMV------GILGRARQFGAINKLLDQMVRDGCQPNVV 396
           A G F+ +  + G   +  TY T++      G L RA  +       D+MV+ G  P+V 
Sbjct: 262 ASGLFDKMV-EIGLVPNAVTYNTLIDGYCNKGDLERAFSYR------DEMVKKGIMPSVS 314

Query: 397 TYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKM 456
           TYN L+H+      + EA D+ K+M+  G  PD +TY  LI+ +++ G    A D++ +M
Sbjct: 315 TYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKRAFDLHNEM 374

Query: 457 QAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNY 516
            + G+ P   TY+ +I  L +   ++ A  LF ++++QG  P+++ +N MI       N 
Sbjct: 375 LSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMIDGHCANGNV 434

Query: 517 QSALKLYRDMQNAGFEPDKVTYSIVMEVLGHC--GYLDEAEAVFAEMRRKNWVPDEPVYG 574
           + A  L ++M      PD+VT++ +M+  G C  G ++EA  +  EM+ +   PD   Y 
Sbjct: 435 ERAFMLLKEMDRKSVPPDEVTFNTLMQ--GRCREGKVEEARMLLDEMKXRGIKPDHISYN 492

Query: 575 LLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNL 634
            L+  +G+ G+++ A+   + ML  G  P + T N+L+    +  +   A  LL+ M+N 
Sbjct: 493 TLISGYGRRGDIKDAFXVRDEMLSIGFNPTLLTYNALIKCLCKNQEGDLAEELLKEMVNK 552

Query: 635 GLKPSLQTYTLLL 647
           G+ P   TY  L+
Sbjct: 553 GISPDDSTYLSLI 565



 Score =  134 bits (336), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 89/358 (24%), Positives = 166/358 (46%), Gaps = 22/358 (6%)

Query: 312 PLAEEALGNTNYSMDAYQANQVLKQLQDHTVALGFFNWLRRQ---AGFKH-------DEH 361
           P+ ZE +  +  S   +   QV   L    ++   +N   +    + F H       D  
Sbjct: 68  PITZEVISKSVLSSQWHFIEQVSPNLTPALISNVLYNLCSKPQLVSDFIHHLHPHCLDTK 127

Query: 362 TYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANY----------- 410
           +Y   V +L R        +LL Q++      N   ++ L  S  R +            
Sbjct: 128 SYCLAVVLLARLPSPKLALQLLKQVMETRIATNRELFDELTLSRDRLSVKSSIVFDLLEG 187

Query: 411 -LNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYS 469
            L +A +    M+ +G +P+ V+Y T+I  ++  G ++ A  +   M+  G+ PD++TY 
Sbjct: 188 KLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYG 247

Query: 470 VIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNA 529
            +I+ + K G L+ A  LF +MV  G +PN VTYN +I       + + A     +M   
Sbjct: 248 SLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKK 307

Query: 530 GFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKA 589
           G  P   TY++++  L   G + EA+ +  EMR+K  +PD   Y +L++ + + GN ++A
Sbjct: 308 GIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKRA 367

Query: 590 WEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
           ++ +  ML  G+ P   T  SL+    R  ++ +A  L + +L+ G+ P +  +  ++
Sbjct: 368 FDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMI 425



 Score =  108 bits (270), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 63/230 (27%), Positives = 112/230 (48%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           R+ G   D  TY  ++    R         L ++M+  G +P  VTY  LI+   R N +
Sbjct: 340 RKKGIIPDAITYNILINGYSRCGNAKRAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRM 399

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
            EA D+F+++   G  PD + +  +ID H   G ++ A  + K+M    + PD  T++ +
Sbjct: 400 KEADDLFEKILDQGVSPDVIMFNAMIDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTL 459

Query: 472 INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF 531
           +    + G ++ A  L  EM  +G  P+ ++YN +I+   +  + + A  +  +M + GF
Sbjct: 460 MQGRCREGKVEEARMLLDEMKXRGIKPDHISYNTLISGYGRRGDIKDAFXVRDEMLSIGF 519

Query: 532 EPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWG 581
            P  +TY+ +++ L      D AE +  EM  K   PD+  Y  L++  G
Sbjct: 520 NPTLLTYNALIKCLCKNQEGDLAEELLKEMVNKGISPDDSTYLSLIEGMG 569



 Score =  101 bits (252), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 56/202 (27%), Positives = 104/202 (51%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           G +    TYT+++ +L R  +    + L ++++  G  P+V+ +N +I  +     +  A
Sbjct: 378 GIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMIDGHCANGNVERA 437

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
             + K+M      PD VT+ TL+    + G ++ A  +  +M+  G+ PD  +Y+ +I+ 
Sbjct: 438 FMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKXRGIKPDHISYNTLISG 497

Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPD 534
            G+ G ++ A  +  EM++ G  P L+TYN +I    K +    A +L ++M N G  PD
Sbjct: 498 YGRRGDIKDAFXVRDEMLSIGFNPTLLTYNALIKCLCKNQEGDLAEELLKEMVNKGISPD 557

Query: 535 KVTYSIVMEVLGHCGYLDEAEA 556
             TY  ++E +G+   L E  A
Sbjct: 558 DSTYLSLIEGMGNVDTLVEDNA 579


>gi|147840312|emb|CAN63985.1| hypothetical protein VITISV_001389 [Vitis vinifera]
          Length = 850

 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 127/481 (26%), Positives = 215/481 (44%), Gaps = 80/481 (16%)

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
           ++G + + +T   M+  L + ++       L  M   G  P+VVTYN LI++Y R   L 
Sbjct: 351 RSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGLLE 410

Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
           EA ++   M   G +P   TY  +I+   K G    A  +  +M   G+SPDT TY++++
Sbjct: 411 EAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILL 470

Query: 473 NCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFE 532
               +  ++  A ++F EM +QG +P+LV+++ +I L +K      ALK +RDM+NAG  
Sbjct: 471 VECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLA 530

Query: 533 PDKVTYSIVM-----------------EVL----------------GHC--GYLDEAEAV 557
           PD V Y+I++                 E+L                G C    L EA+ +
Sbjct: 531 PDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCXLDVVTYNTILNGLCKEKMLSEADEL 590

Query: 558 FAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLR 617
           F EM  +   PD   +  L++ + K GN+ KA   +E M+Q  L+P+V T N+L+  F +
Sbjct: 591 FTEMTERGVFPDFYTFTTLINGYXKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCK 650

Query: 618 VGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS------CCTEARSPYD------------- 658
             ++     L   M++  + P+  +Y +L++      C +EA   +D             
Sbjct: 651 GSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIIT 710

Query: 659 -----MGFCHELMAVSGHPAHMFLLSMPSPG--PDGQNVRDHVGSFLEMMHSE------D 705
                 G+C    AV    A  FL +M   G  PDG      +  F++  + +      +
Sbjct: 711 CNTIVKGYCRAGNAVK---ADEFLSNMLLKGIVPDGITYNTLINGFIKEENMDRAFALVN 767

Query: 706 RESKRGLVDAVVDF------LHKSGLKEEAGSVWEVAAQKNVYPDAVKEKGMSYWLINLH 759
           +    GL+  V+ +        + G  +EA  +     ++ V PD    +     LIN H
Sbjct: 768 KMENSGLLPDVITYNVILNGFSRQGRMQEAELIMLKMIERGVNPD----RSTYTSLINGH 823

Query: 760 V 760
           V
Sbjct: 824 V 824



 Score =  151 bits (381), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 88/306 (28%), Positives = 159/306 (51%), Gaps = 1/306 (0%)

Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLI 402
           AL +F  ++  AG   D   YT ++G   R        K+ D+M+  GC  +VVTYN ++
Sbjct: 517 ALKYFRDMK-NAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCXLDVVTYNTIL 575

Query: 403 HSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLS 462
           +   +   L+EA ++F +M   G  PD  T+ TLI+ + K G ++ A+ +++ M    L 
Sbjct: 576 NGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYXKDGNMNKAVTLFEMMIQRNLK 635

Query: 463 PDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKL 522
           PD  TY+ +I+   K   ++  ++L+ +M+++   PN ++Y I+I           A +L
Sbjct: 636 PDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRL 695

Query: 523 YRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGK 582
           + +M   GFE   +T + +++     G   +A+   + M  K  VPD   Y  L++ + K
Sbjct: 696 WDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLINGFIK 755

Query: 583 AGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQT 642
             N+ +A+     M  +GL P+V T N +L+ F R G++ +A  ++  M+  G+ P   T
Sbjct: 756 EENMDRAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQEAELIMLKMIERGVNPDRST 815

Query: 643 YTLLLS 648
           YT L++
Sbjct: 816 YTSLIN 821



 Score =  122 bits (307), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 125/571 (21%), Positives = 221/571 (38%), Gaps = 87/571 (15%)

Query: 303 RILRQWKWGPLAEEALGNTNYSMDAYQANQVLKQLQDHTVALG--FFNWLRRQA-GFKHD 359
           ++L   K G L   +L N  + +D+     VL + +++ + LG  F + +      FKH 
Sbjct: 179 KVLLNLKQGKL--NSLRNLLFRLDSVVVVDVLYKCREN-LQLGQRFIDSITSNCPNFKHS 235

Query: 360 EHTYTTMVGILGRARQFGAINKLLDQMVRD-----------------GCQPNVVTYNRLI 402
             +++ M+ IL R+R+      ++ +MVR                   C  N + ++ L+
Sbjct: 236 LQSFSAMIHILVRSRRLPDAQAVILRMVRKSGVSRVEIVESLVLTYGNCGSNPLVFDLLV 295

Query: 403 HSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKK------- 455
            +Y +A  L E  + F+ ++  G         +L+    K G++D+A ++Y++       
Sbjct: 296 RTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWVDLAWEIYQEVVRSGVQ 355

Query: 456 ----------------------------MQAAGLSPDTFTYSVIINCLGKAGHLQAAHQL 487
                                       M+  G+ PD  TY+ +IN   + G L+ A +L
Sbjct: 356 VNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGLLEEAFEL 415

Query: 488 FCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGH 547
              M  +G  P + TYN +I    K   Y  A  +  +M   G  PD  TY+I++     
Sbjct: 416 MDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILLVECCR 475

Query: 548 CGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPT 607
              + +AE +F EM  +  VPD   +  L+ L  K G + +A +++  M  AGL P+   
Sbjct: 476 NDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVI 535

Query: 608 CNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS--CCTEARSPYDMGFCHEL 665
              L+  F R G +S+A  +   ML  G    + TY  +L+  C  +  S  D  F    
Sbjct: 536 YTILIGGFCRNGVMSEALKVRDEMLEQGCXLDVVTYNTILNGLCKEKMLSEADELFTE-- 593

Query: 666 MAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRESKRGLVDAVVDFLHKSGL 725
           M   G     +  +    G       +   +  EMM   + +      + ++D   K   
Sbjct: 594 MTERGVFPDFYTFTTLINGYXKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSE 653

Query: 726 KEEAGSVWEVAAQKNVYP-------------------------DAVKEKGMSYWLINLHV 760
            E+   +W     + +YP                         D + EKG    +I  + 
Sbjct: 654 MEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNT 713

Query: 761 MSDGTAVIALSRTLAWFRKQMLISGVGPSRI 791
           +  G      +     F   ML+ G+ P  I
Sbjct: 714 IVKGYCRAGNAVKADEFLSNMLLKGIVPDGI 744



 Score =  116 bits (290), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 63/252 (25%), Positives = 122/252 (48%)

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
           + G   D +T+TT++    +         L + M++   +P+VVTYN LI  + + + + 
Sbjct: 596 ERGVFPDFYTFTTLINGYXKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEME 655

Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
           +  +++  M      P+ ++Y  LI+ +   G +  A  ++ +M   G      T + I+
Sbjct: 656 KVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIV 715

Query: 473 NCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFE 532
               +AG+   A +    M+ +G +P+ +TYN +I    K  N   A  L   M+N+G  
Sbjct: 716 KGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLINGFIKEENMDRAFALVNKMENSGLL 775

Query: 533 PDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEW 592
           PD +TY++++      G + EAE +  +M  +   PD   Y  L++      N+++A+  
Sbjct: 776 PDVITYNVILNGFSRQGRMQEAELIMLKMIERGVNPDRSTYTSLINGHVTQNNLKEAFRV 835

Query: 593 YEAMLQAGLRPN 604
           ++ MLQ G  P+
Sbjct: 836 HDEMLQRGFVPD 847


>gi|15228763|ref|NP_188886.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75223290|sp|Q6NQ83.1|PP247_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At3g22470, mitochondrial; Flags: Precursor
 gi|34365775|gb|AAQ65199.1| At3g22470 [Arabidopsis thaliana]
 gi|51968798|dbj|BAD43091.1| hypothetical protein [Arabidopsis thaliana]
 gi|332643122|gb|AEE76643.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 619

 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 93/305 (30%), Positives = 161/305 (52%), Gaps = 1/305 (0%)

Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLI 402
           AL  FN +  + G K D  TY++++G L    ++    K+L +M+     P+VVT++ LI
Sbjct: 264 ALSLFNEMEMK-GIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALI 322

Query: 403 HSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLS 462
             + +   L EA +++ +M   G  PD +TY +LID   K   L  A  M+  M + G  
Sbjct: 323 DVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCE 382

Query: 463 PDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKL 522
           PD  TYS++IN   KA  +    +LF E+ ++G IPN +TYN ++    ++    +A +L
Sbjct: 383 PDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKEL 442

Query: 523 YRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGK 582
           +++M + G  P  VTY I+++ L   G L++A  +F +M++        +Y +++     
Sbjct: 443 FQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCN 502

Query: 583 AGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQT 642
           A  V  AW  + ++   G++P+V T N ++    + G LS+A  L + M   G  P   T
Sbjct: 503 ASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFT 562

Query: 643 YTLLL 647
           Y +L+
Sbjct: 563 YNILI 567



 Score =  153 bits (386), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 105/374 (28%), Positives = 183/374 (48%), Gaps = 21/374 (5%)

Query: 295 GNVVESVSRILRQWKWGPLAEEALGNTNYSMDAYQANQVLKQL---QDHTVALGFFNWLR 351
           G V E++  I R  ++G           +  D      VL +L    +  +AL  F  + 
Sbjct: 189 GRVSEALVLIDRMVEYG-----------FQPDEVTYGPVLNRLCKSGNSALALDLFRKME 237

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
            +   K     Y+ ++  L +   F     L ++M   G + +VVTY+ LI         
Sbjct: 238 ER-NIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKW 296

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
           ++   + ++M      PD VT+  LID+  K G L  A ++Y +M   G++PDT TY+ +
Sbjct: 297 DDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSL 356

Query: 472 INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF 531
           I+   K   L  A+Q+F  MV++GC P++VTY+I+I    KA+     ++L+R++ + G 
Sbjct: 357 IDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGL 416

Query: 532 EPDKVTYSIVMEVLGHC--GYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKA 589
            P+ +TY+ +  VLG C  G L+ A+ +F EM  +   P    YG+L+D     G + KA
Sbjct: 417 IPNTITYNTL--VLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKA 474

Query: 590 WEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS- 648
            E +E M ++ +   +   N ++       ++ DA+ L   + + G+KP + TY +++  
Sbjct: 475 LEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGG 534

Query: 649 -CCTEARSPYDMGF 661
            C   + S  DM F
Sbjct: 535 LCKKGSLSEADMLF 548



 Score =  145 bits (366), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 89/321 (27%), Positives = 166/321 (51%), Gaps = 1/321 (0%)

Query: 338 QDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVT 397
           + + + LGF   +    G +HD +T T M+    R ++      +L +  + G +P+ +T
Sbjct: 84  KQYDLVLGFCKGMELN-GIEHDMYTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTIT 142

Query: 398 YNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQ 457
           ++ L++ +     ++EA+ +  +M  +   PD VT  TLI+     G +  A+ +  +M 
Sbjct: 143 FSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMV 202

Query: 458 AAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQ 517
             G  PD  TY  ++N L K+G+   A  LF +M  +    ++V Y+I+I    K  ++ 
Sbjct: 203 EYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFD 262

Query: 518 SALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLV 577
            AL L+ +M+  G + D VTYS ++  L + G  D+   +  EM  +N +PD   +  L+
Sbjct: 263 DALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALI 322

Query: 578 DLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLK 637
           D++ K G + +A E Y  M+  G+ P+  T NSL+  F +   L +A  +   M++ G +
Sbjct: 323 DVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCE 382

Query: 638 PSLQTYTLLLSCCTEARSPYD 658
           P + TY++L++   +A+   D
Sbjct: 383 PDIVTYSILINSYCKAKRVDD 403



 Score =  141 bits (355), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 82/296 (27%), Positives = 153/296 (51%)

Query: 359 DEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVF 418
           D  T++ ++ +  +  +     +L ++M+  G  P+ +TYN LI  + + N L+EA  +F
Sbjct: 314 DVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMF 373

Query: 419 KQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKA 478
             M   GCEPD VTY  LI+ + KA  +D  M +++++ + GL P+T TY+ ++    ++
Sbjct: 374 DLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQS 433

Query: 479 GHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTY 538
           G L AA +LF EMV++G  P++VTY I++           AL+++  MQ +        Y
Sbjct: 434 GKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIY 493

Query: 539 SIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQ 598
           +I++  + +   +D+A ++F  +  K   PD   Y +++    K G++ +A   +  M +
Sbjct: 494 NIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKE 553

Query: 599 AGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEAR 654
            G  P+  T N L+ A L    L  +  L++ M   G      T  +++   ++ R
Sbjct: 554 DGCTPDDFTYNILIRAHLGGSGLISSVELIEEMKVCGFSADSSTIKMVIDMLSDRR 609



 Score =  138 bits (348), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 104/404 (25%), Positives = 195/404 (48%), Gaps = 6/404 (1%)

Query: 347 FNWLRR--QAGFKHDEHTYTTMV-GILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIH 403
           F+ L R  + G++ D  T++T+V G     R   A+  L+D+MV    +P++VT + LI+
Sbjct: 125 FSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAV-ALVDRMVEMKQRPDLVTVSTLIN 183

Query: 404 SYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSP 463
                  ++EAL +  +M   G +PD VTY  +++   K+G   +A+D+++KM+   +  
Sbjct: 184 GLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKA 243

Query: 464 DTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLY 523
               YS++I+ L K G    A  LF EM  +G   ++VTY+ +I        +    K+ 
Sbjct: 244 SVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKML 303

Query: 524 RDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKA 583
           R+M      PD VT+S +++V    G L EA+ ++ EM  +   PD   Y  L+D + K 
Sbjct: 304 REMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKE 363

Query: 584 GNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTY 643
             + +A + ++ M+  G  P++ T + L++++ +  ++ D   L + + + GL P+  TY
Sbjct: 364 NCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITY 423

Query: 644 -TLLLSCCTEARSPYDMGFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMH 702
            TL+L  C   +         E+++  G P  +    +   G       +      E M 
Sbjct: 424 NTLVLGFCQSGKLNAAKELFQEMVS-RGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQ 482

Query: 703 SEDRESKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAV 746
                   G+ + ++  +  +   ++A S++   + K V PD V
Sbjct: 483 KSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVV 526



 Score = 63.5 bits (153), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 56/204 (27%), Positives = 93/204 (45%), Gaps = 37/204 (18%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           G   +  TY T+V    ++ +  A  +L  +MV  G  P+VVTY  L+        LN+A
Sbjct: 415 GLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKA 474

Query: 415 LDVFKQMQ-------------VV----------------------GCEPDRVTYCTLIDI 439
           L++F++MQ             ++                      G +PD VTY  +I  
Sbjct: 475 LEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGG 534

Query: 440 HAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC-LGKAGHLQAAHQLFCEMVNQGCIP 498
             K G L  A  +++KM+  G +PD FTY+++I   LG +G L ++ +L  EM   G   
Sbjct: 535 LCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSG-LISSVELIEEMKVCGFSA 593

Query: 499 NLVTYNIMIALQAKARNYQSALKL 522
           +  T  ++I + +  R  +S L +
Sbjct: 594 DSSTIKMVIDMLSDRRLDKSFLDM 617


>gi|302756537|ref|XP_002961692.1| hypothetical protein SELMODRAFT_76597 [Selaginella moellendorffii]
 gi|300170351|gb|EFJ36952.1| hypothetical protein SELMODRAFT_76597 [Selaginella moellendorffii]
          Length = 1056

 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 91/288 (31%), Positives = 154/288 (53%), Gaps = 1/288 (0%)

Query: 362 TYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQM 421
           TY T+V  L ++        LL+ M+  G  P+V+T+N ++    +   + +A +VFK+ 
Sbjct: 475 TYNTLVTGLSKSGMVRDALGLLEFMIESGLSPDVITFNSVLDGLCKEQRILDAHNVFKRA 534

Query: 422 QVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHL 481
              GC P+ VTY TLID  +K   +D A+ +  KM   G   +T TYS +++ L K G +
Sbjct: 535 LERGCRPNVVTYSTLIDGLSKMAKMDEALQLLAKMVELGCRANTVTYSTVVDGLLKVGRM 594

Query: 482 QAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIV 541
           + A  +  +M + GC+P+ VTYN +I    K +  + A+ L R+M  AGF P  VTY+ +
Sbjct: 595 EDAVVVLRQMRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLREMLEAGFHPSVVTYTTL 654

Query: 542 MEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQ-AG 600
              L   G  DEA  +   M  +   P+   Y  +VD   KAG V +A  ++E M +   
Sbjct: 655 CHGLCRSGRFDEAVEILDYMAARGCAPNAITYSSIVDGLCKAGRVTEALGYFEKMARDEV 714

Query: 601 LRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
           + P+V   ++L+    + G++ +AY  L+ M+  G  P + T+++L++
Sbjct: 715 VAPHVIAYSALIDGLCKAGRIDEAYEFLERMIRAGRIPDVVTFSILIN 762



 Score =  156 bits (394), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 127/461 (27%), Positives = 209/461 (45%), Gaps = 26/461 (5%)

Query: 298  VESVSRILRQWKWGPLAEEALGNTNYSMDAYQANQVLKQLQDHTVALGFFNWLRRQAGFK 357
            +E    +LRQ +      +A+   N  +D +   Q L++      A+G    +  +AGF 
Sbjct: 594  MEDAVVVLRQMRDAGCLPDAV-TYNTLIDGFFKRQRLRE------AVGLLREML-EAGFH 645

Query: 358  HDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDV 417
                TYTT+   L R+ +F    ++LD M   GC PN +TY+ ++    +A  + EAL  
Sbjct: 646  PSVVTYTTLCHGLCRSGRFDEAVEILDYMAARGCAPNAITYSSIVDGLCKAGRVTEALGY 705

Query: 418  FKQM---QVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
            F++M   +VV   P  + Y  LID   KAG +D A +  ++M  AG  PD  T+S++IN 
Sbjct: 706  FEKMARDEVVA--PHVIAYSALIDGLCKAGRIDEAYEFLERMIRAGRIPDVVTFSILING 763

Query: 475  LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPD 534
            L  AG +    +LFC M  +GC  ++  YN MI        + +A  L  +M+  G   +
Sbjct: 764  LCDAGRIDTGLELFCGMAERGCKADIYAYNAMINAYCLKGEFSAAYALLEEMKTHGIAKN 823

Query: 535  KVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYE 594
             VT+ IV++ L     +DEA + F  +       DE  Y  L+     +    +A E   
Sbjct: 824  TVTHGIVIKALCGNDRIDEAVSYFHSIPED--CRDEISYNTLITSLVASRRSEQALELLR 881

Query: 595  AMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEAR 654
            AM+  G  P+     +++    + G    A  LLQ M + G  P L+TYT+++S  ++A+
Sbjct: 882  AMVADGGSPDACNYMTVMDGLFKAGSPEVAAKLLQEMRSRGHSPDLRTYTIMISGLSKAK 941

Query: 655  S-PYDMGFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRESKRGLV 713
              P    +  E++  +  P  +   S+     D     D V    +++ S   E    + 
Sbjct: 942  QLPLACDYFEEMLRKNLKPDAIVYSSL----IDAFCKADKVDDAWKLLRSSGIEPTITMY 997

Query: 714  DAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAVKEKGMSYW 754
              +VD L K+   ++A  V      KN  P      G+  W
Sbjct: 998  STMVDSLCKNRGTDKALEVIREMKSKNCEP------GIHIW 1032



 Score =  135 bits (341), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 110/412 (26%), Positives = 180/412 (43%), Gaps = 26/412 (6%)

Query: 316 EALGNTNYSMDAYQANQVLK---QLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGR 372
           + +  +  S D    N +LK   +L+    A      +RR  G   +  T++T++  L  
Sbjct: 334 DVMKESGCSADVITYNILLKGLCKLRRIPEAYRHVELMRRTEGCSPNVVTFSTLIQGLCN 393

Query: 373 ARQFGAINKLLDQMVR-DGCQPNVVTYNRLIHSYGRANYLNEALDVFKQM---------- 421
           A +     ++ ++MV  +G  PN  TY  L+    +A         F+QM          
Sbjct: 394 AGRVNQAWEVYERMVAVEGISPNRFTYAFLLEGLCKAGDSRRLEQCFEQMLEREWRSSSS 453

Query: 422 -----------QVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSV 470
                       V  C P  VTY TL+   +K+G +  A+ + + M  +GLSPD  T++ 
Sbjct: 454 WPIHSPEVDFLMVQVCRPTLVTYNTLVTGLSKSGMVRDALGLLEFMIESGLSPDVITFNS 513

Query: 471 IINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAG 530
           +++ L K   +  AH +F   + +GC PN+VTY+ +I   +K      AL+L   M   G
Sbjct: 514 VLDGLCKEQRILDAHNVFKRALERGCRPNVVTYSTLIDGLSKMAKMDEALQLLAKMVELG 573

Query: 531 FEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAW 590
              + VTYS V++ L   G +++A  V  +MR    +PD   Y  L+D + K   +R+A 
Sbjct: 574 CRANTVTYSTVVDGLLKVGRMEDAVVVLRQMRDAGCLPDAVTYNTLIDGFFKRQRLREAV 633

Query: 591 EWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS-C 649
                ML+AG  P+V T  +L     R G+  +A  +L  M   G  P+  TY+ ++   
Sbjct: 634 GLLREMLEAGFHPSVVTYTTLCHGLCRSGRFDEAVEILDYMAARGCAPNAITYSSIVDGL 693

Query: 650 CTEARSPYDMGFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMM 701
           C   R    +G+  ++        H+   S    G       D    FLE M
Sbjct: 694 CKAGRVTEALGYFEKMARDEVVAPHVIAYSALIDGLCKAGRIDEAYEFLERM 745



 Score =  129 bits (324), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 75/268 (27%), Positives = 138/268 (51%)

Query: 362 TYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQM 421
           TY  ++  L +A +         + ++ G +P VVTY+ +I    R N +++   + ++M
Sbjct: 3   TYNVLINGLCKAGRVCDAFTAFRKAIQFGFRPTVVTYSTVIDGLCRDNEVDKGCKLLEEM 62

Query: 422 QVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHL 481
              GC P+ VTY TL++     G    A  + ++M A G  P+  T+ +II  L K G +
Sbjct: 63  AGRGCAPNAVTYNTLVNALLGQGRAKEAFSLLERMAANGCPPELITFGLIIKGLCKEGEI 122

Query: 482 QAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIV 541
           +AA ++  EMV++G +P++  + +++    +      A   ++ +   GF PD VTY+ +
Sbjct: 123 EAAFRVVDEMVDRGFVPDVEIHTVLLHALCELGRVDEAWFFFQQVLLIGFTPDAVTYNTM 182

Query: 542 MEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGL 601
           ++ L   G L+ A  V   +      P    + + VD   KAGN+  A+E++++M Q G+
Sbjct: 183 VDGLYKAGRLEAAGMVLQLLAESFSSPTVFTFTIAVDGLSKAGNLTGAYEFFDSMPQTGV 242

Query: 602 RPNVPTCNSLLSAFLRVGQLSDAYHLLQ 629
            PN  T ++L+    + G+L  A  LL+
Sbjct: 243 SPNTVTYDALIDGLCKAGKLDIALGLLR 270



 Score =  126 bits (316), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 115/459 (25%), Positives = 195/459 (42%), Gaps = 67/459 (14%)

Query: 342 VALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRL 401
           +ALG       QAG       +++++  L +A +     +LL  M    C PNVV +N L
Sbjct: 264 IALGLLRDKNSQAGM----FAFSSLLHGLCQAHRLEEAIQLLKAM---PCVPNVVCFNSL 316

Query: 402 IHSYGRANYLNEALDVFKQMQ------------------------------------VVG 425
           ++   +A  ++EA ++F  M+                                      G
Sbjct: 317 MNGLCQARRVDEAFELFDVMKESGCSADVITYNILLKGLCKLRRIPEAYRHVELMRRTEG 376

Query: 426 CEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAA-GLSPDTFTYSVIINCLGKAGHLQAA 484
           C P+ VT+ TLI     AG ++ A ++Y++M A  G+SP+ FTY+ ++  L KAG  +  
Sbjct: 377 CSPNVVTFSTLIQGLCNAGRVNQAWEVYERMVAVEGISPNRFTYAFLLEGLCKAGDSRRL 436

Query: 485 HQLFCEMVN---------------------QGCIPNLVTYNIMIALQAKARNYQSALKLY 523
            Q F +M+                      Q C P LVTYN ++   +K+   + AL L 
Sbjct: 437 EQCFEQMLEREWRSSSSWPIHSPEVDFLMVQVCRPTLVTYNTLVTGLSKSGMVRDALGLL 496

Query: 524 RDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKA 583
             M  +G  PD +T++ V++ L     + +A  VF     +   P+   Y  L+D   K 
Sbjct: 497 EFMIESGLSPDVITFNSVLDGLCKEQRILDAHNVFKRALERGCRPNVVTYSTLIDGLSKM 556

Query: 584 GNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTY 643
             + +A +    M++ G R N  T ++++   L+VG++ DA  +L+ M + G  P   TY
Sbjct: 557 AKMDEALQLLAKMVELGCRANTVTYSTVVDGLLKVGRMEDAVVVLRQMRDAGCLPDAVTY 616

Query: 644 -TLLLSCCTEARSPYDMGFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMH 702
            TL+       R    +G   E++    HP+ +   ++   G       D     L+ M 
Sbjct: 617 NTLIDGFFKRQRLREAVGLLREMLEAGFHPSVVTYTTL-CHGLCRSGRFDEAVEILDYMA 675

Query: 703 SEDRESKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNV 741
           +           ++VD L K+G   EA   +E  A+  V
Sbjct: 676 ARGCAPNAITYSSIVDGLCKAGRVTEALGYFEKMARDEV 714



 Score =  119 bits (298), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 70/253 (27%), Positives = 120/253 (47%)

Query: 395 VVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYK 454
           +VTYN LI+   +A  + +A   F++    G  P  VTY T+ID   +   +D    + +
Sbjct: 1   MVTYNVLINGLCKAGRVCDAFTAFRKAIQFGFRPTVVTYSTVIDGLCRDNEVDKGCKLLE 60

Query: 455 KMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKAR 514
           +M   G +P+  TY+ ++N L   G  + A  L   M   GC P L+T+ ++I    K  
Sbjct: 61  EMAGRGCAPNAVTYNTLVNALLGQGRAKEAFSLLERMAANGCPPELITFGLIIKGLCKEG 120

Query: 515 NYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYG 574
             ++A ++  +M + GF PD   +++++  L   G +DEA   F ++    + PD   Y 
Sbjct: 121 EIEAAFRVVDEMVDRGFVPDVEIHTVLLHALCELGRVDEAWFFFQQVLLIGFTPDAVTYN 180

Query: 575 LLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNL 634
            +VD   KAG +  A    + + ++   P V T    +    + G L+ AY     M   
Sbjct: 181 TMVDGLYKAGRLEAAGMVLQLLAESFSSPTVFTFTIAVDGLSKAGNLTGAYEFFDSMPQT 240

Query: 635 GLKPSLQTYTLLL 647
           G+ P+  TY  L+
Sbjct: 241 GVSPNTVTYDALI 253



 Score =  113 bits (283), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 114/492 (23%), Positives = 197/492 (40%), Gaps = 95/492 (19%)

Query: 347 FNWLRR--QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHS 404
           F   R+  Q GF+    TY+T++  L R  +     KLL++M   GC PN VTYN L+++
Sbjct: 21  FTAFRKAIQFGFRPTVVTYSTVIDGLCRDNEVDKGCKLLEEMAGRGCAPNAVTYNTLVNA 80

Query: 405 YGRANYLNEALDVFKQMQVVGCEPDRVTYCTLI--------------------------- 437
                   EA  + ++M   GC P+ +T+  +I                           
Sbjct: 81  LLGQGRAKEAFSLLERMAANGCPPELITFGLIIKGLCKEGEIEAAFRVVDEMVDRGFVPD 140

Query: 438 -DIH-------AKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFC 489
            +IH        + G +D A   ++++   G +PD  TY+ +++ L KAG L+AA  +  
Sbjct: 141 VEIHTVLLHALCELGRVDEAWFFFQQVLLIGFTPDAVTYNTMVDGLYKAGRLEAAGMVLQ 200

Query: 490 EMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCG 549
            +      P + T+ I +   +KA N   A + +  M   G  P+ VTY  +++ L   G
Sbjct: 201 LLAESFSSPTVFTFTIAVDGLSKAGNLTGAYEFFDSMPQTGVSPNTVTYDALIDGLCKAG 260

Query: 550 YLDEA-----------------------------EAVFAEMRRKNWVPDEPVYGLLVDLW 580
            LD A                             E     ++    VP+   +  L++  
Sbjct: 261 KLDIALGLLRDKNSQAGMFAFSSLLHGLCQAHRLEEAIQLLKAMPCVPNVVCFNSLMNGL 320

Query: 581 GKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNL-GLKPS 639
            +A  V +A+E ++ M ++G   +V T N LL    ++ ++ +AY  ++ M    G  P+
Sbjct: 321 CQARRVDEAFELFDVMKESGCSADVITYNILLKGLCKLRRIPEAYRHVELMRRTEGCSPN 380

Query: 640 LQTY-TLLLSCCTEARSPYDMGFCHELMAVSG----HPAHMFLLSMPSPGPDGQNVRDHV 694
           + T+ TL+   C   R          ++AV G       + FLL       D + +    
Sbjct: 381 VVTFSTLIQGLCNAGRVNQAWEVYERMVAVEGISPNRFTYAFLLEGLCKAGDSRRLEQ-- 438

Query: 695 GSFLEMMHSEDRESKRGLVDA-VVDF-------------------LHKSGLKEEAGSVWE 734
             F +M+  E R S    + +  VDF                   L KSG+  +A  + E
Sbjct: 439 -CFEQMLEREWRSSSSWPIHSPEVDFLMVQVCRPTLVTYNTLVTGLSKSGMVRDALGLLE 497

Query: 735 VAAQKNVYPDAV 746
              +  + PD +
Sbjct: 498 FMIESGLSPDVI 509



 Score = 91.7 bits (226), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 76/270 (28%), Positives = 116/270 (42%), Gaps = 36/270 (13%)

Query: 353  QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVT--------------- 397
            + G K D + Y  M+       +F A   LL++M   G   N VT               
Sbjct: 782  ERGCKADIYAYNAMINAYCLKGEFSAAYALLEEMKTHGIAKNTVTHGIVIKALCGNDRID 841

Query: 398  ------------------YNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDI 439
                              YN LI S   +    +AL++ + M   G  PD   Y T++D 
Sbjct: 842  EAVSYFHSIPEDCRDEISYNTLITSLVASRRSEQALELLRAMVADGGSPDACNYMTVMDG 901

Query: 440  HAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPN 499
              KAG  +VA  + ++M++ G SPD  TY+++I+ L KA  L  A   F EM+ +   P+
Sbjct: 902  LFKAGSPEVAAKLLQEMRSRGHSPDLRTYTIMISGLSKAKQLPLACDYFEEMLRKNLKPD 961

Query: 500  LVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFA 559
             + Y+ +I    KA     A KL R   ++G EP    YS +++ L      D+A  V  
Sbjct: 962  AIVYSSLIDAFCKADKVDDAWKLLR---SSGIEPTITMYSTMVDSLCKNRGTDKALEVIR 1018

Query: 560  EMRRKNWVPDEPVYGLLVDLWGKAGNVRKA 589
            EM+ KN  P   ++  L   +   G V +A
Sbjct: 1019 EMKSKNCEPGIHIWTSLATAYVAEGRVDEA 1048



 Score = 89.4 bits (220), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 66/258 (25%), Positives = 110/258 (42%)

Query: 467 TYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDM 526
           TY+V+IN L KAG +  A   F + +  G  P +VTY+ +I    +        KL  +M
Sbjct: 3   TYNVLINGLCKAGRVCDAFTAFRKAIQFGFRPTVVTYSTVIDGLCRDNEVDKGCKLLEEM 62

Query: 527 QNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNV 586
              G  P+ VTY+ ++  L   G   EA ++   M      P+   +GL++    K G +
Sbjct: 63  AGRGCAPNAVTYNTLVNALLGQGRAKEAFSLLERMAANGCPPELITFGLIIKGLCKEGEI 122

Query: 587 RKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLL 646
             A+   + M+  G  P+V     LL A   +G++ +A+   Q +L +G  P   TY  +
Sbjct: 123 EAAFRVVDEMVDRGFVPDVEIHTVLLHALCELGRVDEAWFFFQQVLLIGFTPDAVTYNTM 182

Query: 647 LSCCTEARSPYDMGFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDR 706
           +    +A      G   +L+A S     +F  ++   G            F + M     
Sbjct: 183 VDGLYKAGRLEAAGMVLQLLAESFSSPTVFTFTIAVDGLSKAGNLTGAYEFFDSMPQTGV 242

Query: 707 ESKRGLVDAVVDFLHKSG 724
                  DA++D L K+G
Sbjct: 243 SPNTVTYDALIDGLCKAG 260



 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 48/173 (27%), Positives = 80/173 (46%), Gaps = 3/173 (1%)

Query: 355  GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
            G   D   Y T++  L +A       KLL +M   G  P++ TY  +I    +A  L  A
Sbjct: 887  GGSPDACNYMTVMDGLFKAGSPEVAAKLLQEMRSRGHSPDLRTYTIMISGLSKAKQLPLA 946

Query: 415  LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
             D F++M     +PD + Y +LID   KA  +D   D +K ++++G+ P    YS +++ 
Sbjct: 947  CDYFEEMLRKNLKPDAIVYSSLIDAFCKADKVD---DAWKLLRSSGIEPTITMYSTMVDS 1003

Query: 475  LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQ 527
            L K      A ++  EM ++ C P +  +  +            A+KL  D+Q
Sbjct: 1004 LCKNRGTDKALEVIREMKSKNCEPGIHIWTSLATAYVAEGRVDEAVKLVNDLQ 1056


>gi|359485438|ref|XP_003633275.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 572

 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 93/289 (32%), Positives = 153/289 (52%)

Query: 359 DEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVF 418
           D+ T+ T+V  L +       + ++D M++   +P+VVTYN L+  +   + + + ++VF
Sbjct: 263 DQLTFNTLVDALCKEGMVVKAHYVVDVMIQSDLKPDVVTYNSLMDGHCLRSEMGKTVNVF 322

Query: 419 KQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKA 478
             M   GC P  ++Y TLI+ + K   +D AM ++++M   GL PDT TY+ +I+ L   
Sbjct: 323 DTMVRKGCVPSVISYTTLINGYCKIQIMDKAMGLFEEMSQQGLIPDTVTYNTLIHGLCHV 382

Query: 479 GHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTY 538
           G L+ A  LF EMV  G IP+LVTY I+     K      A+ L + ++    +PD   Y
Sbjct: 383 GRLRDAIALFHEMVVYGQIPDLVTYRILFDYLCKNHRLAEAMVLLKVIEGTNLDPDIHIY 442

Query: 539 SIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQ 598
           SIVM+ +   G L+ A  +F+++  K   PD   Y ++++   + G + +A + +  M +
Sbjct: 443 SIVMDGMCRAGELEAARDLFSKLSSKGLHPDVRTYTIMINGLCQQGLLAEASKLFGEMDE 502

Query: 599 AGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
            G  PN  T N +   FLR  +   A  L Q ML+ G    + T TLL+
Sbjct: 503 NGCSPNACTYNLITRGFLRNNETLRAIQLFQEMLSRGFSIDVSTTTLLV 551



 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 108/386 (27%), Positives = 171/386 (44%), Gaps = 8/386 (2%)

Query: 363 YTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQ 422
           ++ ++  + R + +  +  L  QM   G   N  T N LI+S+   N L  A  V   + 
Sbjct: 57  FSKLLTSITRMKHYSTVLSLYKQMDSFGIPHNTYTLNILINSFCHLNRLGFAFSVLGDIL 116

Query: 423 VVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQ 482
            +G +P   T+ TLI      G +  A+ ++ KM   G  PD  TY  +IN L K G+  
Sbjct: 117 KLGYQPSTATFTTLIRGLCVEGKIGEALQLFDKMTGEGFQPDVLTYGTLINGLCKVGNTS 176

Query: 483 AAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVM 542
            A +    M  + C P +V Y+ +I    K R    AL L+ DM   G  P+  TYS ++
Sbjct: 177 TAIRFLRSMEQRNCRPTVVVYSTIIDSLCKDRQLTEALSLFSDMLAKGISPNNFTYSSLI 236

Query: 543 EVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLR 602
             L   G+  EA  +F  M  +  +PD+  +  LVD   K G V KA    + M+Q+ L+
Sbjct: 237 HGLCILGHWKEAIRLFYAMIHRKIMPDQLTFNTLVDALCKEGMVVKAHYVVDVMIQSDLK 296

Query: 603 PNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS-CCTEARSPYDMGF 661
           P+V T NSL+       ++    ++   M+  G  PS+ +YT L++  C        MG 
Sbjct: 297 PDVVTYNSLMDGHCLRSEMGKTVNVFDTMVRKGCVPSVISYTTLINGYCKIQIMDKAMGL 356

Query: 662 CHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMM---HSEDRESKRGLVDAVVD 718
             E+      P  +   ++         +RD +  F EM+      D  + R L     D
Sbjct: 357 FEEMSQQGLIPDTVTYNTLIHGLCHVGRLRDAIALFHEMVVYGQIPDLVTYRIL----FD 412

Query: 719 FLHKSGLKEEAGSVWEVAAQKNVYPD 744
           +L K+    EA  + +V    N+ PD
Sbjct: 413 YLCKNHRLAEAMVLLKVIEGTNLDPD 438



 Score =  130 bits (326), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 94/330 (28%), Positives = 148/330 (44%), Gaps = 39/330 (11%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           G  H+ +T   ++       + G    +L  +++ G QP+  T+  LI        + EA
Sbjct: 84  GIPHNTYTLNILINSFCHLNRLGFAFSVLGDILKLGYQPSTATFTTLIRGLCVEGKIGEA 143

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGF----------------------------- 445
           L +F +M   G +PD +TY TLI+   K G                              
Sbjct: 144 LQLFDKMTGEGFQPDVLTYGTLINGLCKVGNTSTAIRFLRSMEQRNCRPTVVVYSTIIDS 203

Query: 446 ------LDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPN 499
                 L  A+ ++  M A G+SP+ FTYS +I+ L   GH + A +LF  M+++  +P+
Sbjct: 204 LCKDRQLTEALSLFSDMLAKGISPNNFTYSSLIHGLCILGHWKEAIRLFYAMIHRKIMPD 263

Query: 500 LVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHC--GYLDEAEAV 557
            +T+N ++    K      A  +   M  +  +PD VTY+ +M+  GHC    + +   V
Sbjct: 264 QLTFNTLVDALCKEGMVVKAHYVVDVMIQSDLKPDVVTYNSLMD--GHCLRSEMGKTVNV 321

Query: 558 FAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLR 617
           F  M RK  VP    Y  L++ + K   + KA   +E M Q GL P+  T N+L+     
Sbjct: 322 FDTMVRKGCVPSVISYTTLINGYCKIQIMDKAMGLFEEMSQQGLIPDTVTYNTLIHGLCH 381

Query: 618 VGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
           VG+L DA  L   M+  G  P L TY +L 
Sbjct: 382 VGRLRDAIALFHEMVVYGQIPDLVTYRILF 411



 Score =  119 bits (299), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 74/260 (28%), Positives = 125/260 (48%)

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
           Q+  K D  TY +++       + G    + D MVR GC P+V++Y  LI+ Y +   ++
Sbjct: 292 QSDLKPDVVTYNSLMDGHCLRSEMGKTVNVFDTMVRKGCVPSVISYTTLINGYCKIQIMD 351

Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
           +A+ +F++M   G  PD VTY TLI      G L  A+ ++ +M   G  PD  TY ++ 
Sbjct: 352 KAMGLFEEMSQQGLIPDTVTYNTLIHGLCHVGRLRDAIALFHEMVVYGQIPDLVTYRILF 411

Query: 473 NCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFE 532
           + L K   L  A  L   +      P++  Y+I++    +A   ++A  L+  + + G  
Sbjct: 412 DYLCKNHRLAEAMVLLKVIEGTNLDPDIHIYSIVMDGMCRAGELEAARDLFSKLSSKGLH 471

Query: 533 PDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEW 592
           PD  TY+I++  L   G L EA  +F EM      P+   Y L+   + +     +A + 
Sbjct: 472 PDVRTYTIMINGLCQQGLLAEASKLFGEMDENGCSPNACTYNLITRGFLRNNETLRAIQL 531

Query: 593 YEAMLQAGLRPNVPTCNSLL 612
           ++ ML  G   +V T   L+
Sbjct: 532 FQEMLSRGFSIDVSTTTLLV 551



 Score =  117 bits (292), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 87/319 (27%), Positives = 137/319 (42%), Gaps = 35/319 (10%)

Query: 363 YTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQ 422
           Y+T++  L + RQ      L   M+  G  PN  TY+ LIH      +  EA+ +F  M 
Sbjct: 197 YSTIIDSLCKDRQLTEALSLFSDMLAKGISPNNFTYSSLIHGLCILGHWKEAIRLFYAMI 256

Query: 423 VVGCEPDRVTYCTLIDIHAKAGFL-----------------DVA---------------- 449
                PD++T+ TL+D   K G +                 DV                 
Sbjct: 257 HRKIMPDQLTFNTLVDALCKEGMVVKAHYVVDVMIQSDLKPDVVTYNSLMDGHCLRSEMG 316

Query: 450 --MDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMI 507
             ++++  M   G  P   +Y+ +IN   K   +  A  LF EM  QG IP+ VTYN +I
Sbjct: 317 KTVNVFDTMVRKGCVPSVISYTTLINGYCKIQIMDKAMGLFEEMSQQGLIPDTVTYNTLI 376

Query: 508 ALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWV 567
                    + A+ L+ +M   G  PD VTY I+ + L     L EA  +   +   N  
Sbjct: 377 HGLCHVGRLRDAIALFHEMVVYGQIPDLVTYRILFDYLCKNHRLAEAMVLLKVIEGTNLD 436

Query: 568 PDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHL 627
           PD  +Y +++D   +AG +  A + +  +   GL P+V T   +++   + G L++A  L
Sbjct: 437 PDIHIYSIVMDGMCRAGELEAARDLFSKLSSKGLHPDVRTYTIMINGLCQQGLLAEASKL 496

Query: 628 LQGMLNLGLKPSLQTYTLL 646
              M   G  P+  TY L+
Sbjct: 497 FGEMDENGCSPNACTYNLI 515



 Score =  114 bits (285), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 90/392 (22%), Positives = 171/392 (43%), Gaps = 47/392 (11%)

Query: 382 LLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHA 441
           L ++M+R    P++V +++L+ S  R  + +  L ++KQM   G   +  T   LI+   
Sbjct: 41  LFNRMLRMRPPPSIVDFSKLLTSITRMKHYSTVLSLYKQMDSFGIPHNTYTLNILINSFC 100

Query: 442 KAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLV 501
               L  A  +   +   G  P T T++ +I  L   G +  A QLF +M  +G  P+++
Sbjct: 101 HLNRLGFAFSVLGDILKLGYQPSTATFTTLIRGLCVEGKIGEALQLFDKMTGEGFQPDVL 160

Query: 502 TYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEM 561
           TY  +I    K  N  +A++  R M+     P  V YS +++ L     L EA ++F++M
Sbjct: 161 TYGTLINGLCKVGNTSTAIRFLRSMEQRNCRPTVVVYSTIIDSLCKDRQLTEALSLFSDM 220

Query: 562 RRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQL 621
             K   P+   Y  L+      G+ ++A   + AM+   + P+  T N+L+ A  + G +
Sbjct: 221 LAKGISPNNFTYSSLIHGLCILGHWKEAIRLFYAMIHRKIMPDQLTFNTLVDALCKEGMV 280

Query: 622 SDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGFCHELMAVSGHPAHMFLLSMP 681
             A++++  M+   LKP + TY  L+                                  
Sbjct: 281 VKAHYVVDVMIQSDLKPDVVTYNSLM---------------------------------- 306

Query: 682 SPGPDGQNVRDHVGSFLEMMHSEDRESKRGLVDAVVDFLH------KSGLKEEAGSVWEV 735
               DG  +R  +G  + +    D   ++G V +V+ +        K  + ++A  ++E 
Sbjct: 307 ----DGHCLRSEMGKTVNVF---DTMVRKGCVPSVISYTTLINGYCKIQIMDKAMGLFEE 359

Query: 736 AAQKNVYPDAVKEKGMSYWLINLHVMSDGTAV 767
            +Q+ + PD V    + + L ++  + D  A+
Sbjct: 360 MSQQGLIPDTVTYNTLIHGLCHVGRLRDAIAL 391



 Score =  108 bits (269), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 71/226 (31%), Positives = 118/226 (52%), Gaps = 3/226 (1%)

Query: 336 QLQDHTVALGFFNWLRRQAGFKHDEHTYTTMV-GILGRARQFGAINKLLDQMVRDGCQPN 394
           ++Q    A+G F  + +Q G   D  TY T++ G+    R   AI  L  +MV  G  P+
Sbjct: 346 KIQIMDKAMGLFEEMSQQ-GLIPDTVTYNTLIHGLCHVGRLRDAI-ALFHEMVVYGQIPD 403

Query: 395 VVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYK 454
           +VTY  L     + + L EA+ + K ++    +PD   Y  ++D   +AG L+ A D++ 
Sbjct: 404 LVTYRILFDYLCKNHRLAEAMVLLKVIEGTNLDPDIHIYSIVMDGMCRAGELEAARDLFS 463

Query: 455 KMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKAR 514
           K+ + GL PD  TY+++IN L + G L  A +LF EM   GC PN  TYN++     +  
Sbjct: 464 KLSSKGLHPDVRTYTIMINGLCQQGLLAEASKLFGEMDENGCSPNACTYNLITRGFLRNN 523

Query: 515 NYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAE 560
               A++L+++M + GF  D  T ++++E+L   G     + +  E
Sbjct: 524 ETLRAIQLFQEMLSRGFSIDVSTTTLLVEMLSDDGLDQSVKQILCE 569


>gi|18407744|ref|NP_564809.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75169913|sp|Q9CAM8.1|PP100_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g63150
 gi|12323259|gb|AAG51611.1|AC010795_15 unknown protein; 70626-72515 [Arabidopsis thaliana]
 gi|15810427|gb|AAL07101.1| unknown protein [Arabidopsis thaliana]
 gi|24030501|gb|AAN41397.1| unknown protein [Arabidopsis thaliana]
 gi|332195941|gb|AEE34062.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 629

 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 102/399 (25%), Positives = 192/399 (48%), Gaps = 3/399 (0%)

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
           + G++ D  T ++++     +++      L+DQMV  G +P+  T+  LIH     N  +
Sbjct: 146 KLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKAS 205

Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
           EA+ +  QM   GC+PD VTY T+++   K G +D+A+++  KM+AA +  +   ++ II
Sbjct: 206 EAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTII 265

Query: 473 NCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFE 532
           + L K  H++ A  LF EM  +G  PN+VTYN +I        +  A +L  +M      
Sbjct: 266 DSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKIN 325

Query: 533 PDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEW 592
           P+ VT++ +++     G L EAE +  EM +++  PD   Y LL++ +     + +A + 
Sbjct: 326 PNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQM 385

Query: 593 YEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTE 652
           ++ M+     PN+ T N+L++ F +  ++ D   L + M   GL  +  TYT ++    +
Sbjct: 386 FKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQ 445

Query: 653 ARSPYDMGFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRESKRGL 712
           A          + M  +  P  +   S+   G       D      + +   + E    +
Sbjct: 446 AGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFI 505

Query: 713 VDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAVKEKGM 751
            + +++ + K+G   + G  W++    ++ PD V    M
Sbjct: 506 YNTMIEGMCKAG---KVGEAWDLFCSLSIKPDVVTYNTM 541



 Score =  130 bits (326), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 98/363 (26%), Positives = 168/363 (46%), Gaps = 18/363 (4%)

Query: 363 YTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQ 422
           +  ++  + +  +F  +  L +QM   G   ++ TY+  I+ + R + L+ AL V  +M 
Sbjct: 86  FNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMM 145

Query: 423 VVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQ 482
            +G EPD VT  +L++ +  +  +  A+ +  +M   G  PDTFT++ +I+ L       
Sbjct: 146 KLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKAS 205

Query: 483 AAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVM 542
            A  L  +MV +GC P+LVTY  ++    K  +   AL L   M+ A  + + V ++ ++
Sbjct: 206 EAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTII 265

Query: 543 EVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLR 602
           + L    +++ A  +F EM  K   P+   Y  L++     G    A      ML+  + 
Sbjct: 266 DSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKIN 325

Query: 603 PNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGFC 662
           PNV T N+L+ AF + G+L +A  L + M+   + P   TY LL++           GFC
Sbjct: 326 PNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLIN-----------GFC 374

Query: 663 HELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSED-----RE-SKRGLVDAV 716
                        F++S     P+ Q     +  F +    ED     RE S+RGLV   
Sbjct: 375 MHNRLDEAKQMFKFMVSKDCL-PNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNT 433

Query: 717 VDF 719
           V +
Sbjct: 434 VTY 436



 Score =  111 bits (277), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 88/345 (25%), Positives = 155/345 (44%), Gaps = 33/345 (9%)

Query: 342 VALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRL 401
           VA+  F  +  + G + +  TY +++  L    ++   ++LL  M+     PNVVT+N L
Sbjct: 276 VAVDLFTEMETK-GIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNAL 334

Query: 402 IHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGL 461
           I ++ +   L EA  + ++M     +PD +TY  LI+       LD A  M+K M +   
Sbjct: 335 IDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDC 394

Query: 462 SPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALK 521
            P+  TY+ +IN   K   ++   +LF EM  +G + N VTY  +I    +A +  SA  
Sbjct: 395 LPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQM 454

Query: 522 LYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWG 581
           +++ M +     D +TYSI++  L   G LD A  +F  +++     +  +Y  +++   
Sbjct: 455 VFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMC 514

Query: 582 KAGNVRKAWEWY--------------------------------EAMLQAGLRPNVPTCN 609
           KAG V +AW+ +                                  M + G  PN  T N
Sbjct: 515 KAGKVGEAWDLFCSLSIKPDVVTYNTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYN 574

Query: 610 SLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEAR 654
           +L+ A LR    + +  L++ M + G      T +L+ +   + R
Sbjct: 575 TLIRANLRDCDRAASAELIKEMRSSGFVGDASTISLVTNMLHDGR 619



 Score =  100 bits (248), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 63/245 (25%), Positives = 119/245 (48%), Gaps = 1/245 (0%)

Query: 411 LNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSV 470
           +++A+D+F  M      P  V +  L+   AK    ++ + + ++MQ  G+S D +TYS+
Sbjct: 64  VDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSI 123

Query: 471 IINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAG 530
            INC  +   L  A  +  +M+  G  P++VT + ++     ++    A+ L   M   G
Sbjct: 124 FINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMG 183

Query: 531 FEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAW 590
           ++PD  T++ ++  L       EA A+  +M ++   PD   YG +V+   K G++  A 
Sbjct: 184 YKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLAL 243

Query: 591 EWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSC- 649
                M  A ++ NV   N+++ +  +   +  A  L   M   G++P++ TY  L++C 
Sbjct: 244 NLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCL 303

Query: 650 CTEAR 654
           C   R
Sbjct: 304 CNYGR 308



 Score = 94.7 bits (234), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 69/273 (25%), Positives = 124/273 (45%), Gaps = 4/273 (1%)

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
           Q     D  TY  ++       +     ++   MV   C PN+ TYN LI+ + +   + 
Sbjct: 356 QRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVE 415

Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
           + +++F++M   G   + VTY T+I    +AG  D A  ++K+M +  +  D  TYS+++
Sbjct: 416 DGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILL 475

Query: 473 NCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFE 532
           + L   G L  A  +F  +       N+  YN MI    KA     A  L+  +     +
Sbjct: 476 HGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDLFCSL---SIK 532

Query: 533 PDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEW 592
           PD VTY+ ++  L     L EA+ +F +M+    +P+   Y  L+    +  +   + E 
Sbjct: 533 PDVVTYNTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLIRANLRDCDRAASAEL 592

Query: 593 YEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAY 625
            + M  +G   +  T  SL++  L  G+L  ++
Sbjct: 593 IKEMRSSGFVGDASTI-SLVTNMLHDGRLDKSF 624



 Score = 68.9 bits (167), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 45/174 (25%), Positives = 79/174 (45%)

Query: 470 VIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNA 529
           ++ N L     +  A  LF +MV     P++V +N +++  AK   ++  + L   MQ  
Sbjct: 53  ILRNRLSDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTL 112

Query: 530 GFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKA 589
           G   D  TYSI +        L  A AV A+M +  + PD      L++ +  +  +  A
Sbjct: 113 GISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDA 172

Query: 590 WEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTY 643
               + M++ G +P+  T  +L+       + S+A  L+  M+  G +P L TY
Sbjct: 173 VALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTY 226



 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 35/131 (26%), Positives = 65/131 (49%), Gaps = 3/131 (2%)

Query: 392 QPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMD 451
           + N+  YN +I    +A  + EA D+F  + +   +PD VTY T+I        L  A D
Sbjct: 500 ELNIFIYNTMIEGMCKAGKVGEAWDLFCSLSI---KPDVVTYNTMISGLCSKRLLQEADD 556

Query: 452 MYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQA 511
           +++KM+  G  P++ TY+ +I    +     A+ +L  EM + G + +  T +++  +  
Sbjct: 557 LFRKMKEDGTLPNSGTYNTLIRANLRDCDRAASAELIKEMRSSGFVGDASTISLVTNMLH 616

Query: 512 KARNYQSALKL 522
             R  +S L +
Sbjct: 617 DGRLDKSFLNM 627


>gi|224138172|ref|XP_002326536.1| predicted protein [Populus trichocarpa]
 gi|222833858|gb|EEE72335.1| predicted protein [Populus trichocarpa]
          Length = 697

 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 92/307 (29%), Positives = 160/307 (52%), Gaps = 2/307 (0%)

Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLI 402
            L FF+ L  + G+KHD  +Y+T++    +     + N L+ +M ++G  P+ + Y  LI
Sbjct: 349 CLNFFHELSAK-GYKHDLISYSTLIHGFLKGHNVKSANNLVHEMRKNGLVPDYIIYISLI 407

Query: 403 HSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLS 462
             Y R   L EAL  F  M   G +PD +T   ++D +   G  + A+    +M+   + 
Sbjct: 408 REYCRKGCLKEALKNFYTMLQDGLQPDIITCNHIVDQYCSRGQFEEALIYINQMKDQNIL 467

Query: 463 PDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYN-IMIALQAKARNYQSALK 521
           P+++TYSVIIN L K   ++ A ++   M      P+++ Y  IM     + +N   A K
Sbjct: 468 PNSYTYSVIINWLCKYQAVEKAWEVLPVMFKDNIFPSVIHYTTIMDGYAKQFKNPMKAWK 527

Query: 522 LYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWG 581
           LYR M   G +PD VT ++++++    G + +A  +F EM  +    DE  +  ++D + 
Sbjct: 528 LYRKMPKLGCKPDNVTLTVLVDMFSKRGKMSKALNLFKEMAEEGLSRDEFAFTAIIDGYC 587

Query: 582 KAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQ 641
           + GNV++AW  Y+ M +  + PNV T   L+  F ++ +L  A  L+  M    + P ++
Sbjct: 588 RVGNVKRAWSMYKKMKRNNVTPNVKTYTCLVDGFCKLKRLDMATMLIDDMKRNSVTPDVK 647

Query: 642 TYTLLLS 648
           TYT L++
Sbjct: 648 TYTALIA 654



 Score =  117 bits (293), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 74/303 (24%), Positives = 149/303 (49%), Gaps = 7/303 (2%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINK-----LLDQMVRDGCQPNVVTYNRLIHSYG 406
           + +G   + +TYT M+    + R    I+      +L++M   G  P VVTY   IH   
Sbjct: 177 KNSGPSPNVYTYTIMINFYCKERHGQNIDMEQASLILEEMEEKGENPTVVTYGVYIHGLC 236

Query: 407 RANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTF 466
           R   + +A +  + ++      +   Y  LI    + G  D A+ + ++M+  G+SPD +
Sbjct: 237 RVGSIEDAWNKIQDLRSSNQPLNIYCYNALIQGFCQKGRPDEALKLLEEMKDEGISPDIY 296

Query: 467 TYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLV-TYNIMIALQAKARNYQSALKLYRD 525
           +YS+++N     G +++   L  EM +    P LV   ++++ L+ K       L  + +
Sbjct: 297 SYSILVNAFCTEGDIESGMNLIQEMEHCNKKPPLVCCTSVLMGLRTKGL-VNDCLNFFHE 355

Query: 526 MQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGN 585
           +   G++ D ++YS ++        +  A  +  EMR+   VPD  +Y  L+  + + G 
Sbjct: 356 LSAKGYKHDLISYSTLIHGFLKGHNVKSANNLVHEMRKNGLVPDYIIYISLIREYCRKGC 415

Query: 586 VRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTL 645
           +++A + +  MLQ GL+P++ TCN ++  +   GQ  +A   +  M +  + P+  TY++
Sbjct: 416 LKEALKNFYTMLQDGLQPDIITCNHIVDQYCSRGQFEEALIYINQMKDQNILPNSYTYSV 475

Query: 646 LLS 648
           +++
Sbjct: 476 IIN 478



 Score =  107 bits (267), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 73/282 (25%), Positives = 138/282 (48%), Gaps = 15/282 (5%)

Query: 304 ILRQWKWGPLAEEALGNTNYSM-------DAYQANQVLKQL---QDHTVALGFFNWLRRQ 353
           ++R++      +EAL N  Y+M       D    N ++ Q         AL + N ++ Q
Sbjct: 406 LIREYCRKGCLKEALKNF-YTMLQDGLQPDIITCNHIVDQYCSRGQFEEALIYINQMKDQ 464

Query: 354 AGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN- 412
                + +TY+ ++  L + +      ++L  M +D   P+V+ Y  ++  Y +  + N 
Sbjct: 465 -NILPNSYTYSVIINWLCKYQAVEKAWEVLPVMFKDNIFPSVIHYTTIMDGYAK-QFKNP 522

Query: 413 -EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
            +A  ++++M  +GC+PD VT   L+D+ +K G +  A++++K+M   GLS D F ++ I
Sbjct: 523 MKAWKLYRKMPKLGCKPDNVTLTVLVDMFSKRGKMSKALNLFKEMAEEGLSRDEFAFTAI 582

Query: 472 INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF 531
           I+   + G+++ A  ++ +M      PN+ TY  ++    K +    A  L  DM+    
Sbjct: 583 IDGYCRVGNVKRAWSMYKKMKRNNVTPNVKTYTCLVDGFCKLKRLDMATMLIDDMKRNSV 642

Query: 532 EPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVY 573
            PD  TY+ ++        +D A  VF EM++K  +PD   Y
Sbjct: 643 TPDVKTYTALIAGYQRIENIDRAYEVFDEMKKKGTLPDHIAY 684



 Score =  100 bits (248), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 69/291 (23%), Positives = 145/291 (49%), Gaps = 7/291 (2%)

Query: 361 HTYTTMV-GILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFK 419
           + Y  ++ G   + R   A+ KLL++M  +G  P++ +Y+ L++++     +   +++ +
Sbjct: 261 YCYNALIQGFCQKGRPDEAL-KLLEEMKDEGISPDIYSYSILVNAFCTEGDIESGMNLIQ 319

Query: 420 QMQVVGCEPDRVTYCT--LIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGK 477
           +M+    +P  V  CT  L+ +  K G ++  ++ + ++ A G   D  +YS +I+   K
Sbjct: 320 EMEHCNKKPPLVC-CTSVLMGLRTK-GLVNDCLNFFHELSAKGYKHDLISYSTLIHGFLK 377

Query: 478 AGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVT 537
             ++++A+ L  EM   G +P+ + Y  +I    +    + ALK +  M   G +PD +T
Sbjct: 378 GHNVKSANNLVHEMRKNGLVPDYIIYISLIREYCRKGCLKEALKNFYTMLQDGLQPDIIT 437

Query: 538 YSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAML 597
            + +++     G  +EA     +M+ +N +P+   Y ++++   K   V KAWE    M 
Sbjct: 438 CNHIVDQYCSRGQFEEALIYINQMKDQNILPNSYTYSVIINWLCKYQAVEKAWEVLPVMF 497

Query: 598 QAGLRPNVPTCNSLLSAFLR-VGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
           +  + P+V    +++  + +       A+ L + M  LG KP   T T+L+
Sbjct: 498 KDNIFPSVIHYTTIMDGYAKQFKNPMKAWKLYRKMPKLGCKPDNVTLTVLV 548



 Score = 97.1 bits (240), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 70/297 (23%), Positives = 133/297 (44%), Gaps = 1/297 (0%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           +  G   D ++Y+ +V          +   L+ +M     +P +V    ++        +
Sbjct: 287 KDEGISPDIYSYSILVNAFCTEGDIESGMNLIQEMEHCNKKPPLVCCTSVLMGLRTKGLV 346

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
           N+ L+ F ++   G + D ++Y TLI    K   +  A ++  +M+  GL PD   Y  +
Sbjct: 347 NDCLNFFHELSAKGYKHDLISYSTLIHGFLKGHNVKSANNLVHEMRKNGLVPDYIIYISL 406

Query: 472 INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF 531
           I    + G L+ A + F  M+  G  P+++T N ++        ++ AL     M++   
Sbjct: 407 IREYCRKGCLKEALKNFYTMLQDGLQPDIITCNHIVDQYCSRGQFEEALIYINQMKDQNI 466

Query: 532 EPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKA-GNVRKAW 590
            P+  TYS+++  L     +++A  V   M + N  P    Y  ++D + K   N  KAW
Sbjct: 467 LPNSYTYSVIINWLCKYQAVEKAWEVLPVMFKDNIFPSVIHYTTIMDGYAKQFKNPMKAW 526

Query: 591 EWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
           + Y  M + G +P+  T   L+  F + G++S A +L + M   GL      +T ++
Sbjct: 527 KLYRKMPKLGCKPDNVTLTVLVDMFSKRGKMSKALNLFKEMAEEGLSRDEFAFTAII 583



 Score = 90.5 bits (223), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 66/289 (22%), Positives = 118/289 (40%), Gaps = 36/289 (12%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           R+ G   D   Y +++    R        K    M++DG QP+++T N ++  Y      
Sbjct: 392 RKNGLVPDYIIYISLIREYCRKGCLKEALKNFYTMLQDGLQPDIITCNHIVDQYCSRGQF 451

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVA---------------------- 449
            EAL    QM+     P+  TY  +I+   K   ++ A                      
Sbjct: 452 EEALIYINQMKDQNILPNSYTYSVIINWLCKYQAVEKAWEVLPVMFKDNIFPSVIHYTTI 511

Query: 450 MD--------------MYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQG 495
           MD              +Y+KM   G  PD  T +V+++   K G +  A  LF EM  +G
Sbjct: 512 MDGYAKQFKNPMKAWKLYRKMPKLGCKPDNVTLTVLVDMFSKRGKMSKALNLFKEMAEEG 571

Query: 496 CIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAE 555
              +   +  +I    +  N + A  +Y+ M+     P+  TY+ +++       LD A 
Sbjct: 572 LSRDEFAFTAIIDGYCRVGNVKRAWSMYKKMKRNNVTPNVKTYTCLVDGFCKLKRLDMAT 631

Query: 556 AVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPN 604
            +  +M+R +  PD   Y  L+  + +  N+ +A+E ++ M + G  P+
Sbjct: 632 MLIDDMKRNSVTPDVKTYTALIAGYQRIENIDRAYEVFDEMKKKGTLPD 680



 Score = 85.9 bits (211), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 81/324 (25%), Positives = 141/324 (43%), Gaps = 21/324 (6%)

Query: 436 LIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQG 495
           LI + A    L  A D++ + +  G+  +  + + ++ CL +   L+A   LF ++ N G
Sbjct: 121 LIKVFASNKMLADAKDVFMQAKKIGVELNISSCNFLLKCLAEGDKLEAVRSLFDDLKNSG 180

Query: 496 CIPNLVTYNIMIALQAKARNYQS-----ALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGY 550
             PN+ TY IMI    K R+ Q+     A  +  +M+  G  P  VTY + +  L   G 
Sbjct: 181 PSPNVYTYTIMINFYCKERHGQNIDMEQASLILEEMEEKGENPTVVTYGVYIHGLCRVGS 240

Query: 551 LDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNS 610
           +++A     ++R  N   +   Y  L+  + + G   +A +  E M   G+ P++ + + 
Sbjct: 241 IEDAWNKIQDLRSSNQPLNIYCYNALIQGFCQKGRPDEALKLLEEMKDEGISPDIYSYSI 300

Query: 611 LLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYT-LLLSCCTEARSPYDMGFCHELMAVS 669
           L++AF   G +    +L+Q M +   KP L   T +L+   T+      + F HEL A  
Sbjct: 301 LVNAFCTEGDIESGMNLIQEMEHCNKKPPLVCCTSVLMGLRTKGLVNDCLNFFHELSA-K 359

Query: 670 GHPAHMFLLSMPSPG-PDGQNVRDHVGSFLEMMHSEDRESKRGLVDAVVDFLH------K 722
           G+   +   S    G   G NV+       EM        K GLV   + ++       +
Sbjct: 360 GYKHDLISYSTLIHGFLKGHNVKSANNLVHEM-------RKNGLVPDYIIYISLIREYCR 412

Query: 723 SGLKEEAGSVWEVAAQKNVYPDAV 746
            G  +EA   +    Q  + PD +
Sbjct: 413 KGCLKEALKNFYTMLQDGLQPDII 436



 Score = 82.4 bits (202), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 75/374 (20%), Positives = 156/374 (41%), Gaps = 7/374 (1%)

Query: 401 LIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAG 460
           LI  +     L +A DVF Q + +G E +  +   L+   A+   L+    ++  ++ +G
Sbjct: 121 LIKVFASNKMLADAKDVFMQAKKIGVELNISSCNFLLKCLAEGDKLEAVRSLFDDLKNSG 180

Query: 461 LSPDTFTYSVIINCLGKAGH-----LQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARN 515
            SP+ +TY+++IN   K  H     ++ A  +  EM  +G  P +VTY + I    +  +
Sbjct: 181 PSPNVYTYTIMINFYCKERHGQNIDMEQASLILEEMEEKGENPTVVTYGVYIHGLCRVGS 240

Query: 516 YQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGL 575
            + A    +D++++    +   Y+ +++     G  DEA  +  EM+ +   PD   Y +
Sbjct: 241 IEDAWNKIQDLRSSNQPLNIYCYNALIQGFCQKGRPDEALKLLEEMKDEGISPDIYSYSI 300

Query: 576 LVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLG 635
           LV+ +   G++       + M     +P +  C S+L      G ++D  +    +   G
Sbjct: 301 LVNAFCTEGDIESGMNLIQEMEHCNKKPPLVCCTSVLMGLRTKGLVNDCLNFFHELSAKG 360

Query: 636 LKPSLQTYTLLLSCCTEARSPYDM-GFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHV 694
            K  L +Y+ L+    +  +        HE+      P ++  +S+         +++ +
Sbjct: 361 YKHDLISYSTLIHGFLKGHNVKSANNLVHEMRKNGLVPDYIIYISLIREYCRKGCLKEAL 420

Query: 695 GSFLEMMHSEDRESKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAVKEKGMSYW 754
            +F  M+  +  +      + +VD     G  EEA         +N+ P++     +  W
Sbjct: 421 KNFYTMLQ-DGLQPDIITCNHIVDQYCSRGQFEEALIYINQMKDQNILPNSYTYSVIINW 479

Query: 755 LINLHVMSDGTAVI 768
           L     +     V+
Sbjct: 480 LCKYQAVEKAWEVL 493



 Score = 72.0 bits (175), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 48/210 (22%), Positives = 96/210 (45%), Gaps = 6/210 (2%)

Query: 469 SVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQN 528
           S++I        L  A  +F +    G   N+ + N ++   A+    ++   L+ D++N
Sbjct: 119 SLLIKVFASNKMLADAKDVFMQAKKIGVELNISSCNFLLKCLAEGDKLEAVRSLFDDLKN 178

Query: 529 AGFEPDKVTYSIVM-----EVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKA 583
           +G  P+  TY+I++     E  G    +++A  +  EM  K   P    YG+ +    + 
Sbjct: 179 SGPSPNVYTYTIMINFYCKERHGQNIDMEQASLILEEMEEKGENPTVVTYGVYIHGLCRV 238

Query: 584 GNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTY 643
           G++  AW   + +  +    N+   N+L+  F + G+  +A  LL+ M + G+ P + +Y
Sbjct: 239 GSIEDAWNKIQDLRSSNQPLNIYCYNALIQGFCQKGRPDEALKLLEEMKDEGISPDIYSY 298

Query: 644 TLLLSC-CTEARSPYDMGFCHELMAVSGHP 672
           ++L++  CTE      M    E+   +  P
Sbjct: 299 SILVNAFCTEGDIESGMNLIQEMEHCNKKP 328



 Score = 52.8 bits (125), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 26/75 (34%), Positives = 39/75 (52%)

Query: 362 TYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQM 421
           TYT +V    + ++      L+D M R+   P+V TY  LI  Y R   ++ A +VF +M
Sbjct: 613 TYTCLVDGFCKLKRLDMATMLIDDMKRNSVTPDVKTYTALIAGYQRIENIDRAYEVFDEM 672

Query: 422 QVVGCEPDRVTYCTL 436
           +  G  PD + Y TL
Sbjct: 673 KKKGTLPDHIAYLTL 687


>gi|22128589|gb|AAM52340.1| fertility restorer-like protein [Petunia x hybrida]
          Length = 591

 Score =  158 bits (399), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 91/311 (29%), Positives = 160/311 (51%), Gaps = 4/311 (1%)

Query: 340 HTVALGF-FNWLRRQAGFKHDEHTYTTMV-GILGRARQFGAINKLLDQMVRDG-CQPNVV 396
           H   LGF    +  + G  ++E T+TT++ G+    +   A++ L  ++VR+  C+PN V
Sbjct: 121 HRTDLGFSVLAIHFKKGIPYNEVTFTTLIRGLFAENKVKDAVH-LFKKLVRENICEPNEV 179

Query: 397 TYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKM 456
            Y  +++   +  +  +A D+ + M+    +P+  TY  +ID   K G LD A  +  +M
Sbjct: 180 MYGTVMNGLCKKGHTQKAFDLLRLMEQGSTKPNTRTYTIVIDAFCKDGMLDGATSLLNEM 239

Query: 457 QAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNY 516
           +   + PD FTYS +I+ L K    +    LF EM++    PN+ T+N +I    K    
Sbjct: 240 KQKSIPPDIFTYSTLIDALCKLSQWENVRTLFLEMIHLNIYPNVCTFNSVIDGLCKEGKV 299

Query: 517 QSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLL 576
           + A ++ R M   G +PD +TY+++++  G  G +D A  +F  M  K+  PD   Y +L
Sbjct: 300 EDAEEIMRYMIEKGVDPDVITYNMIIDGYGLRGQVDRAREIFDSMINKSIEPDIISYNIL 359

Query: 577 VDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGL 636
           ++ + +   + +A +    + Q GL+P++ TCN LL     +G+   A +    ML+ G 
Sbjct: 360 INGYARQKKIDEAMQVCREISQKGLKPSIVTCNVLLHGLFELGRTKSAQNFFDEMLSAGH 419

Query: 637 KPSLQTYTLLL 647
            P L T+  LL
Sbjct: 420 IPDLYTHCTLL 430



 Score =  125 bits (314), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 78/320 (24%), Positives = 153/320 (47%), Gaps = 13/320 (4%)

Query: 347 FNWLR--RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHS 404
           F+ LR   Q   K +  TYT ++    +         LL++M +    P++ TY+ LI +
Sbjct: 198 FDLLRLMEQGSTKPNTRTYTIVIDAFCKDGMLDGATSLLNEMKQKSIPPDIFTYSTLIDA 257

Query: 405 YGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPD 464
             + +       +F +M  +   P+  T+ ++ID   K G ++ A ++ + M   G+ PD
Sbjct: 258 LCKLSQWENVRTLFLEMIHLNIYPNVCTFNSVIDGLCKEGKVEDAEEIMRYMIEKGVDPD 317

Query: 465 TFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYR 524
             TY++II+  G  G +  A ++F  M+N+   P++++YNI+I   A+ +    A+++ R
Sbjct: 318 VITYNMIIDGYGLRGQVDRAREIFDSMINKSIEPDIISYNILINGYARQKKIDEAMQVCR 377

Query: 525 DMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAG 584
           ++   G +P  VT ++++  L   G    A+  F EM     +PD   +  L+  + K G
Sbjct: 378 EISQKGLKPSIVTCNVLLHGLFELGRTKSAQNFFDEMLSAGHIPDLYTHCTLLGGYFKNG 437

Query: 585 NVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYT 644
            V +A   +  + +     N+    +++    + G+L  A+   + +  +GL P + TYT
Sbjct: 438 LVEEAMSHFHKLERRREDTNIQIYTAVIDGLCKNGKLDKAHATFEKLPLIGLHPDVITYT 497

Query: 645 LLLSCCTEARSPYDMGFCHE 664
            ++S           G+C E
Sbjct: 498 AMIS-----------GYCQE 506



 Score =  125 bits (313), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 75/296 (25%), Positives = 150/296 (50%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           +Q     D  TY+T++  L +  Q+  +  L  +M+     PNV T+N +I    +   +
Sbjct: 240 KQKSIPPDIFTYSTLIDALCKLSQWENVRTLFLEMIHLNIYPNVCTFNSVIDGLCKEGKV 299

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
            +A ++ + M   G +PD +TY  +ID +   G +D A +++  M    + PD  +Y+++
Sbjct: 300 EDAEEIMRYMIEKGVDPDVITYNMIIDGYGLRGQVDRAREIFDSMINKSIEPDIISYNIL 359

Query: 472 INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF 531
           IN   +   +  A Q+  E+  +G  P++VT N+++    +    +SA   + +M +AG 
Sbjct: 360 INGYARQKKIDEAMQVCREISQKGLKPSIVTCNVLLHGLFELGRTKSAQNFFDEMLSAGH 419

Query: 532 EPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWE 591
            PD  T+  ++      G ++EA + F ++ R+    +  +Y  ++D   K G + KA  
Sbjct: 420 IPDLYTHCTLLGGYFKNGLVEEAMSHFHKLERRREDTNIQIYTAVIDGLCKNGKLDKAHA 479

Query: 592 WYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
            +E +   GL P+V T  +++S + + G L +A  +L+ M + G     +TY +++
Sbjct: 480 TFEKLPLIGLHPDVITYTAMISGYCQEGLLDEAKDMLRKMEDNGCLADNRTYNVIV 535



 Score =  107 bits (266), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 70/291 (24%), Positives = 139/291 (47%)

Query: 362 TYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQM 421
           T+ +++  L +  +     +++  M+  G  P+V+TYN +I  YG    ++ A ++F  M
Sbjct: 285 TFNSVIDGLCKEGKVEDAEEIMRYMIEKGVDPDVITYNMIIDGYGLRGQVDRAREIFDSM 344

Query: 422 QVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHL 481
                EPD ++Y  LI+ +A+   +D AM + +++   GL P   T +V+++ L + G  
Sbjct: 345 INKSIEPDIISYNILINGYARQKKIDEAMQVCREISQKGLKPSIVTCNVLLHGLFELGRT 404

Query: 482 QAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIV 541
           ++A   F EM++ G IP+L T+  ++    K    + A+  +  ++    + +   Y+ V
Sbjct: 405 KSAQNFFDEMLSAGHIPDLYTHCTLLGGYFKNGLVEEAMSHFHKLERRREDTNIQIYTAV 464

Query: 542 MEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGL 601
           ++ L   G LD+A A F ++      PD   Y  ++  + + G + +A +    M   G 
Sbjct: 465 IDGLCKNGKLDKAHATFEKLPLIGLHPDVITYTAMISGYCQEGLLDEAKDMLRKMEDNGC 524

Query: 602 RPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTE 652
             +  T N ++  FLR  ++S+    L+ +          T  LL+    E
Sbjct: 525 LADNRTYNVIVRGFLRSNKVSEMKAFLEEIAGKSFSFEAATVELLMDIIAE 575



 Score =  100 bits (248), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 94/442 (21%), Positives = 176/442 (39%), Gaps = 73/442 (16%)

Query: 382 LLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVV----------------- 424
           L  QMVR    P+V ++++L+ +     + +  + +F+++  +                 
Sbjct: 59  LFRQMVRTKPLPSVASFSKLLKAMVHMKHYSSVVSLFREIHKLRIPVHEFILSIVVNSCC 118

Query: 425 ------------------GCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGL-SPDT 465
                             G   + VT+ TLI        +  A+ ++KK+    +  P+ 
Sbjct: 119 LMHRTDLGFSVLAIHFKKGIPYNEVTFTTLIRGLFAENKVKDAVHLFKKLVRENICEPNE 178

Query: 466 FTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRD 525
             Y  ++N L K GH Q A  L   M      PN  TY I+I    K      A  L  +
Sbjct: 179 VMYGTVMNGLCKKGHTQKAFDLLRLMEQGSTKPNTRTYTIVIDAFCKDGMLDGATSLLNE 238

Query: 526 MQNAGFEPDKVTYSIVMEVL---------------------------------GHC--GY 550
           M+     PD  TYS +++ L                                 G C  G 
Sbjct: 239 MKQKSIPPDIFTYSTLIDALCKLSQWENVRTLFLEMIHLNIYPNVCTFNSVIDGLCKEGK 298

Query: 551 LDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNS 610
           +++AE +   M  K   PD   Y +++D +G  G V +A E +++M+   + P++ + N 
Sbjct: 299 VEDAEEIMRYMIEKGVDPDVITYNMIIDGYGLRGQVDRAREIFDSMINKSIEPDIISYNI 358

Query: 611 LLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTE-ARSPYDMGFCHELMAVS 669
           L++ + R  ++ +A  + + +   GLKPS+ T  +LL    E  R+     F  E+++ +
Sbjct: 359 LINGYARQKKIDEAMQVCREISQKGLKPSIVTCNVLLHGLFELGRTKSAQNFFDEMLS-A 417

Query: 670 GHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRESKRGLVDAVVDFLHKSGLKEEA 729
           GH   ++       G     + +   S    +     ++   +  AV+D L K+G  ++A
Sbjct: 418 GHIPDLYTHCTLLGGYFKNGLVEEAMSHFHKLERRREDTNIQIYTAVIDGLCKNGKLDKA 477

Query: 730 GSVWEVAAQKNVYPDAVKEKGM 751
            + +E      ++PD +    M
Sbjct: 478 HATFEKLPLIGLHPDVITYTAM 499



 Score = 89.7 bits (221), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 62/275 (22%), Positives = 116/275 (42%), Gaps = 35/275 (12%)

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
           + G   D  TY  ++   G   Q     ++ D M+    +P++++YN LI+ Y R   ++
Sbjct: 311 EKGVDPDVITYNMIIDGYGLRGQVDRAREIFDSMINKSIEPDIISYNILINGYARQKKID 370

Query: 413 EALDV-----------------------------------FKQMQVVGCEPDRVTYCTLI 437
           EA+ V                                   F +M   G  PD  T+CTL+
Sbjct: 371 EAMQVCREISQKGLKPSIVTCNVLLHGLFELGRTKSAQNFFDEMLSAGHIPDLYTHCTLL 430

Query: 438 DIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCI 497
             + K G ++ AM  + K++      +   Y+ +I+ L K G L  AH  F ++   G  
Sbjct: 431 GGYFKNGLVEEAMSHFHKLERRREDTNIQIYTAVIDGLCKNGKLDKAHATFEKLPLIGLH 490

Query: 498 PNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAV 557
           P+++TY  MI+   +      A  + R M++ G   D  TY++++        + E +A 
Sbjct: 491 PDVITYTAMISGYCQEGLLDEAKDMLRKMEDNGCLADNRTYNVIVRGFLRSNKVSEMKAF 550

Query: 558 FAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEW 592
             E+  K++  +     LL+D+  +  ++ +   W
Sbjct: 551 LEEIAGKSFSFEAATVELLMDIIAEDPSITRKMHW 585



 Score = 62.8 bits (151), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 65/303 (21%), Positives = 121/303 (39%), Gaps = 73/303 (24%)

Query: 481 LQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQ------------- 527
           L  A  LF +MV    +P++ +++ ++      ++Y S + L+R++              
Sbjct: 53  LDDAFSLFRQMVRTKPLPSVASFSKLLKAMVHMKHYSSVVSLFREIHKLRIPVHEFILSI 112

Query: 528 ----------------------NAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKN 565
                                   G   ++VT++ ++  L     + +A  +F ++ R+N
Sbjct: 113 VVNSCCLMHRTDLGFSVLAIHFKKGIPYNEVTFTTLIRGLFAENKVKDAVHLFKKLVREN 172

Query: 566 WV-PDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDA 624
              P+E +YG +++   K G+ +KA++    M Q   +PN  T   ++ AF + G L  A
Sbjct: 173 ICEPNEVMYGTVMNGLCKKGHTQKAFDLLRLMEQGSTKPNTRTYTIVIDAFCKDGMLDGA 232

Query: 625 YHLLQGMLNLGLKPSLQTY-TLLLSCCTEARSPYDMGFCHELMAVSGHPAHMFLLSMPSP 683
             LL  M    + P + TY TL+ + C  ++                             
Sbjct: 233 TSLLNEMKQKSIPPDIFTYSTLIDALCKLSQ----------------------------- 263

Query: 684 GPDGQNVRDHVGSFLEMMHSEDRESKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYP 743
               +NVR     FLEM+H  +        ++V+D L K G  E+A  +     +K V P
Sbjct: 264 ---WENVRT---LFLEMIHL-NIYPNVCTFNSVIDGLCKEGKVEDAEEIMRYMIEKGVDP 316

Query: 744 DAV 746
           D +
Sbjct: 317 DVI 319


>gi|356517665|ref|XP_003527507.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20300,
           mitochondrial-like [Glycine max]
          Length = 564

 Score =  158 bits (399), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 94/342 (27%), Positives = 156/342 (45%), Gaps = 38/342 (11%)

Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLI 402
           +L FFNW     GF      Y  M+ + G+ RQF     ++D M   G +  V T++ L+
Sbjct: 161 SLAFFNWSSSLDGFPASPEPYNEMLDLAGKLRQFDLAWHVIDLMKSRGVEITVHTFSALV 220

Query: 403 HSYGRANYLNEALDVFKQMQVVGC----------------------------------EP 428
             Y RA    EA+  F +M+  GC                                  EP
Sbjct: 221 RRYVRAGLAAEAVHAFNRMEDYGCTPDMVAFSIVISSLCKKRRANEAQSFFDSLKHRFEP 280

Query: 429 DRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLF 488
           D V Y +L+    +AG +  A +++  M+ AG+ P+ +TYS++I+ L + G +  AH +F
Sbjct: 281 DVVVYTSLVHGWCRAGDISKAEEVFSDMKMAGIKPNVYTYSIVIDSLCRCGQITRAHDVF 340

Query: 489 CEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHC 548
            EM++ GC PN VT+N ++ +  KA   +  LK+Y  M+  G   D ++Y+ ++E   HC
Sbjct: 341 SEMIDAGCDPNAVTFNSLMRVHVKAGRTEKVLKVYNQMKRLGCPADTISYNFIIE--SHC 398

Query: 549 --GYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVP 606
               L+EA  +   M +K   P+   +  +     K  +V  A   Y  M +   +PN  
Sbjct: 399 RDENLEEAAKILNLMVKKGVAPNASTFNFIFGCIAKLHDVNGAHRMYARMKELNCQPNTL 458

Query: 607 TCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
           T N L+  F           + + M    ++P++ TY +L+S
Sbjct: 459 TYNILMRMFAESRSTDMVLKMKKEMDESQVEPNVNTYRILIS 500



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 74/255 (29%), Positives = 135/255 (52%), Gaps = 3/255 (1%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           + AG K + +TY+ ++  L R  Q    + +  +M+  GC PN VT+N L+  + +A   
Sbjct: 309 KMAGIKPNVYTYSIVIDSLCRCGQITRAHDVFSEMIDAGCDPNAVTFNSLMRVHVKAGRT 368

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
            + L V+ QM+ +GC  D ++Y  +I+ H +   L+ A  +   M   G++P+  T++ I
Sbjct: 369 EKVLKVYNQMKRLGCPADTISYNFIIESHCRDENLEEAAKILNLMVKKGVAPNASTFNFI 428

Query: 472 INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF 531
             C+ K   +  AH+++  M    C PN +TYNI++ + A++R+    LK+ ++M  +  
Sbjct: 429 FGCIAKLHDVNGAHRMYARMKELNCQPNTLTYNILMRMFAESRSTDMVLKMKKEMDESQV 488

Query: 532 EPDKVTYSIVMEVLGHCGYLDEAEAVFAEM-RRKNWVPDEPVYGLLVDLWGKAGNVRKAW 590
           EP+  TY I++ +     + + A  +  EM   K   P+  VY  +++L  KAG ++K  
Sbjct: 489 EPNVNTYRILISMFCDMKHWNNAYKLMMEMVEEKCLRPNLSVYETVLELLRKAGQLKKHE 548

Query: 591 EWYEAMLQAGL--RP 603
           E  + M+  G   RP
Sbjct: 549 ELVDKMVARGFVTRP 563



 Score =  136 bits (342), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 82/295 (27%), Positives = 143/295 (48%), Gaps = 3/295 (1%)

Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLI 402
           A  FF+ L+ +  F+ D   YT++V    RA       ++   M   G +PNV TY+ +I
Sbjct: 267 AQSFFDSLKHR--FEPDVVVYTSLVHGWCRAGDISKAEEVFSDMKMAGIKPNVYTYSIVI 324

Query: 403 HSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLS 462
            S  R   +  A DVF +M   GC+P+ VT+ +L+ +H KAG  +  + +Y +M+  G  
Sbjct: 325 DSLCRCGQITRAHDVFSEMIDAGCDPNAVTFNSLMRVHVKAGRTEKVLKVYNQMKRLGCP 384

Query: 463 PDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKL 522
            DT +Y+ II    +  +L+ A ++   MV +G  PN  T+N +    AK  +   A ++
Sbjct: 385 ADTISYNFIIESHCRDENLEEAAKILNLMVKKGVAPNASTFNFIFGCIAKLHDVNGAHRM 444

Query: 523 YRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGK 582
           Y  M+    +P+ +TY+I+M +       D    +  EM      P+   Y +L+ ++  
Sbjct: 445 YARMKELNCQPNTLTYNILMRMFAESRSTDMVLKMKKEMDESQVEPNVNTYRILISMFCD 504

Query: 583 AGNVRKAWEWYEAMLQAG-LRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGL 636
             +   A++    M++   LRPN+    ++L    + GQL     L+  M+  G 
Sbjct: 505 MKHWNNAYKLMMEMVEEKCLRPNLSVYETVLELLRKAGQLKKHEELVDKMVARGF 559


>gi|224130706|ref|XP_002328356.1| predicted protein [Populus trichocarpa]
 gi|222838071|gb|EEE76436.1| predicted protein [Populus trichocarpa]
          Length = 613

 Score =  158 bits (399), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 91/297 (30%), Positives = 157/297 (52%), Gaps = 4/297 (1%)

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
           + G   D  T+  ++  L    +     +L ++MV+ G +PNV++Y  +I+   +    +
Sbjct: 156 KLGIHPDAITFNALINGLCNEGKIKEAVELFNEMVKRGHEPNVISYTTVINGLCKTGNTS 215

Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
            A+DVFK+M+  GC+P+ VTY T+ID   K   ++ AM+   +M   G+ P+ FTY+ I+
Sbjct: 216 MAVDVFKKMEQNGCKPNVVTYSTIIDSLCKDRLVNDAMEFLSEMVERGIPPNVFTYNSIV 275

Query: 473 NCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFE 532
           +     G L  A +LF EMV +  +PN VT+ I++    K      A  ++  M   G E
Sbjct: 276 HGFCNLGQLNEATRLFKEMVGRDVMPNTVTFTILVDGLCKEGMVSEARLVFETMTEKGVE 335

Query: 533 PDKVTYSIVMEVLGHC--GYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAW 590
           PD  TY+ +M+  G+C    ++EA+ VF  M RK   P    Y +L++ + K+  + +A 
Sbjct: 336 PDISTYNALMD--GYCLQRLMNEAKKVFEIMIRKGCAPGAHSYNILINGYCKSRRMDEAK 393

Query: 591 EWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
                M    L P+  T ++L+    ++G+  +A +L + M + G  P+L TY +LL
Sbjct: 394 SLLAEMYHKALNPDTVTYSTLMQGLCQLGRPKEALNLFKEMCSYGPHPNLVTYVILL 450



 Score =  152 bits (385), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 92/298 (30%), Positives = 151/298 (50%), Gaps = 4/298 (1%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
            Q G K +  TY+T++  L + R      + L +MV  G  PNV TYN ++H +     L
Sbjct: 225 EQNGCKPNVVTYSTIIDSLCKDRLVNDAMEFLSEMVERGIPPNVFTYNSIVHGFCNLGQL 284

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
           NEA  +FK+M      P+ VT+  L+D   K G +  A  +++ M   G+ PD  TY+ +
Sbjct: 285 NEATRLFKEMVGRDVMPNTVTFTILVDGLCKEGMVSEARLVFETMTEKGVEPDISTYNAL 344

Query: 472 IN--CLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNA 529
           ++  CL +   +  A ++F  M+ +GC P   +YNI+I    K+R    A  L  +M + 
Sbjct: 345 MDGYCLQRL--MNEAKKVFEIMIRKGCAPGAHSYNILINGYCKSRRMDEAKSLLAEMYHK 402

Query: 530 GFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKA 589
              PD VTYS +M+ L   G   EA  +F EM      P+   Y +L+D + K G++ +A
Sbjct: 403 ALNPDTVTYSTLMQGLCQLGRPKEALNLFKEMCSYGPHPNLVTYVILLDGFCKHGHLDEA 462

Query: 590 WEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
            +  ++M +  L PN+     L+      G+L  A  L   +   G +P ++TYT+++
Sbjct: 463 LKLLKSMKEKKLEPNIVHYTILIEGMFIAGKLEVAKELFSKLFGDGTRPDIRTYTVMI 520



 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 89/316 (28%), Positives = 156/316 (49%), Gaps = 1/316 (0%)

Query: 358 HDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDV 417
           H+ ++   ++  L R         +L +M + G  P+ +T+N LI+       + EA+++
Sbjct: 126 HNVYSLNILINCLCRLNHVDFSVSVLGKMFKLGIHPDAITFNALINGLCNEGKIKEAVEL 185

Query: 418 FKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGK 477
           F +M   G EP+ ++Y T+I+   K G   +A+D++KKM+  G  P+  TYS II+ L K
Sbjct: 186 FNEMVKRGHEPNVISYTTVINGLCKTGNTSMAVDVFKKMEQNGCKPNVVTYSTIIDSLCK 245

Query: 478 AGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVT 537
              +  A +   EMV +G  PN+ TYN ++           A +L+++M      P+ VT
Sbjct: 246 DRLVNDAMEFLSEMVERGIPPNVFTYNSIVHGFCNLGQLNEATRLFKEMVGRDVMPNTVT 305

Query: 538 YSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAML 597
           ++I+++ L   G + EA  VF  M  K   PD   Y  L+D +     + +A + +E M+
Sbjct: 306 FTILVDGLCKEGMVSEARLVFETMTEKGVEPDISTYNALMDGYCLQRLMNEAKKVFEIMI 365

Query: 598 QAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTY-TLLLSCCTEARSP 656
           + G  P   + N L++ + +  ++ +A  LL  M +  L P   TY TL+   C   R  
Sbjct: 366 RKGCAPGAHSYNILINGYCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQLGRPK 425

Query: 657 YDMGFCHELMAVSGHP 672
             +    E+ +   HP
Sbjct: 426 EALNLFKEMCSYGPHP 441



 Score =  141 bits (355), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 79/292 (27%), Positives = 151/292 (51%)

Query: 363 YTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQ 422
           +   +G   + +Q+  +  L +QM       NV + N LI+   R N+++ ++ V  +M 
Sbjct: 96  FGKFLGSFAKKKQYSTVVSLCNQMDLFRVTHNVYSLNILINCLCRLNHVDFSVSVLGKMF 155

Query: 423 VVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQ 482
            +G  PD +T+  LI+     G +  A++++ +M   G  P+  +Y+ +IN L K G+  
Sbjct: 156 KLGIHPDAITFNALINGLCNEGKIKEAVELFNEMVKRGHEPNVISYTTVINGLCKTGNTS 215

Query: 483 AAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVM 542
            A  +F +M   GC PN+VTY+ +I    K R    A++   +M   G  P+  TY+ ++
Sbjct: 216 MAVDVFKKMEQNGCKPNVVTYSTIIDSLCKDRLVNDAMEFLSEMVERGIPPNVFTYNSIV 275

Query: 543 EVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLR 602
               + G L+EA  +F EM  ++ +P+   + +LVD   K G V +A   +E M + G+ 
Sbjct: 276 HGFCNLGQLNEATRLFKEMVGRDVMPNTVTFTILVDGLCKEGMVSEARLVFETMTEKGVE 335

Query: 603 PNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEAR 654
           P++ T N+L+  +     +++A  + + M+  G  P   +Y +L++   ++R
Sbjct: 336 PDISTYNALMDGYCLQRLMNEAKKVFEIMIRKGCAPGAHSYNILINGYCKSR 387



 Score =  140 bits (352), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 87/307 (28%), Positives = 159/307 (51%), Gaps = 5/307 (1%)

Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLI 402
           A+  FN + ++ G + +  +YTT++  L +         +  +M ++GC+PNVVTY+ +I
Sbjct: 182 AVELFNEMVKR-GHEPNVISYTTVINGLCKTGNTSMAVDVFKKMEQNGCKPNVVTYSTII 240

Query: 403 HSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLS 462
            S  +   +N+A++   +M   G  P+  TY +++      G L+ A  ++K+M    + 
Sbjct: 241 DSLCKDRLVNDAMEFLSEMVERGIPPNVFTYNSIVHGFCNLGQLNEATRLFKEMVGRDVM 300

Query: 463 PDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKL 522
           P+T T++++++ L K G +  A  +F  M  +G  P++ TYN ++      R    A K+
Sbjct: 301 PNTVTFTILVDGLCKEGMVSEARLVFETMTEKGVEPDISTYNALMDGYCLQRLMNEAKKV 360

Query: 523 YRDMQNAGFEPDKVTYSIVMEVLGHCG--YLDEAEAVFAEMRRKNWVPDEPVYGLLVDLW 580
           +  M   G  P   +Y+I++   G+C    +DEA+++ AEM  K   PD   Y  L+   
Sbjct: 361 FEIMIRKGCAPGAHSYNILIN--GYCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGL 418

Query: 581 GKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSL 640
            + G  ++A   ++ M   G  PN+ T   LL  F + G L +A  LL+ M    L+P++
Sbjct: 419 CQLGRPKEALNLFKEMCSYGPHPNLVTYVILLDGFCKHGHLDEALKLLKSMKEKKLEPNI 478

Query: 641 QTYTLLL 647
             YT+L+
Sbjct: 479 VHYTILI 485



 Score =  137 bits (346), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 87/286 (30%), Positives = 143/286 (50%)

Query: 362 TYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQM 421
           T+T +V  L +         + + M   G +P++ TYN L+  Y     +NEA  VF+ M
Sbjct: 305 TFTILVDGLCKEGMVSEARLVFETMTEKGVEPDISTYNALMDGYCLQRLMNEAKKVFEIM 364

Query: 422 QVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHL 481
              GC P   +Y  LI+ + K+  +D A  +  +M    L+PDT TYS ++  L + G  
Sbjct: 365 IRKGCAPGAHSYNILINGYCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQLGRP 424

Query: 482 QAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIV 541
           + A  LF EM + G  PNLVTY I++    K  +   ALKL + M+    EP+ V Y+I+
Sbjct: 425 KEALNLFKEMCSYGPHPNLVTYVILLDGFCKHGHLDEALKLLKSMKEKKLEPNIVHYTIL 484

Query: 542 MEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGL 601
           +E +   G L+ A+ +F+++      PD   Y +++    K G   +A++ +  M   G 
Sbjct: 485 IEGMFIAGKLEVAKELFSKLFGDGTRPDIRTYTVMIKGLLKEGLSDEAYDLFRKMEDDGF 544

Query: 602 RPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
            PN  + N ++  FL+    S A  L+  M+      +L T+ +LL
Sbjct: 545 LPNSCSYNVMIQGFLQNQDSSTAIRLIDEMVGKRFSVNLSTFQMLL 590



 Score =  130 bits (326), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 79/295 (26%), Positives = 144/295 (48%)

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
           + G   +  TY ++V       Q     +L  +MV     PN VT+  L+    +   ++
Sbjct: 261 ERGIPPNVFTYNSIVHGFCNLGQLNEATRLFKEMVGRDVMPNTVTFTILVDGLCKEGMVS 320

Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
           EA  VF+ M   G EPD  TY  L+D +     ++ A  +++ M   G +P   +Y+++I
Sbjct: 321 EARLVFETMTEKGVEPDISTYNALMDGYCLQRLMNEAKKVFEIMIRKGCAPGAHSYNILI 380

Query: 473 NCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFE 532
           N   K+  +  A  L  EM ++   P+ VTY+ ++    +    + AL L+++M + G  
Sbjct: 381 NGYCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQLGRPKEALNLFKEMCSYGPH 440

Query: 533 PDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEW 592
           P+ VTY I+++     G+LDEA  +   M+ K   P+   Y +L++    AG +  A E 
Sbjct: 441 PNLVTYVILLDGFCKHGHLDEALKLLKSMKEKKLEPNIVHYTILIEGMFIAGKLEVAKEL 500

Query: 593 YEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
           +  +   G RP++ T   ++   L+ G   +AY L + M + G  P+  +Y +++
Sbjct: 501 FSKLFGDGTRPDIRTYTVMIKGLLKEGLSDEAYDLFRKMEDDGFLPNSCSYNVMI 555



 Score =  112 bits (280), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 77/285 (27%), Positives = 137/285 (48%), Gaps = 17/285 (5%)

Query: 300 SVSRILRQWKWGPLAEEALGNTNYSMDAYQANQVLKQLQDHTVALGFFNWLRRQAGFKHD 359
           S +R++ +       E  +   N  MD Y   +++ +      A   F  + R+ G    
Sbjct: 320 SEARLVFETMTEKGVEPDISTYNALMDGYCLQRLMNE------AKKVFEIMIRK-GCAPG 372

Query: 360 EHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFK 419
            H+Y  ++    ++R+      LL +M      P+ VTY+ L+    +     EAL++FK
Sbjct: 373 AHSYNILINGYCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQLGRPKEALNLFK 432

Query: 420 QMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAG 479
           +M   G  P+ VTY  L+D   K G LD A+ + K M+   L P+   Y+++I  +  AG
Sbjct: 433 EMCSYGPHPNLVTYVILLDGFCKHGHLDEALKLLKSMKEKKLEPNIVHYTILIEGMFIAG 492

Query: 480 HLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYS 539
            L+ A +LF ++   G  P++ TY +MI    K      A  L+R M++ GF P+  +Y+
Sbjct: 493 KLEVAKELFSKLFGDGTRPDIRTYTVMIKGLLKEGLSDEAYDLFRKMEDDGFLPNSCSYN 552

Query: 540 IVMEVLGHCGYL---DEAEAV--FAEMRRKNWVPDEPVYGLLVDL 579
           ++++     G+L   D + A+    EM  K +  +   + +L+DL
Sbjct: 553 VMIQ-----GFLQNQDSSTAIRLIDEMVGKRFSVNLSTFQMLLDL 592



 Score =  103 bits (258), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 77/335 (22%), Positives = 142/335 (42%), Gaps = 35/335 (10%)

Query: 411 LNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSV 470
           +++AL  F +M  +   P  V +   +   AK       + +  +M    ++ + ++ ++
Sbjct: 74  VDDALASFYRMVRINPRPSVVEFGKFLGSFAKKKQYSTVVSLCNQMDLFRVTHNVYSLNI 133

Query: 471 IINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAG 530
           +INCL +  H+  +  +  +M   G  P+ +T+N +I         + A++L+ +M   G
Sbjct: 134 LINCLCRLNHVDFSVSVLGKMFKLGIHPDAITFNALINGLCNEGKIKEAVELFNEMVKRG 193

Query: 531 FEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAW 590
            EP+ ++Y+ V+  L   G    A  VF +M +    P+   Y  ++D   K   V  A 
Sbjct: 194 HEPNVISYTTVINGLCKTGNTSMAVDVFKKMEQNGCKPNVVTYSTIIDSLCKDRLVNDAM 253

Query: 591 EWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCC 650
           E+   M++ G+ PNV T NS++  F  +GQL++A  L + M+   + P+  T+T+L+   
Sbjct: 254 EFLSEMVERGIPPNVFTYNSIVHGFCNLGQLNEATRLFKEMVGRDVMPNTVTFTILVD-- 311

Query: 651 TEARSPYDMGFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRESKR 710
                    G C E M                                E M  +  E   
Sbjct: 312 ---------GLCKEGMVSEARLV------------------------FETMTEKGVEPDI 338

Query: 711 GLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDA 745
              +A++D      L  EA  V+E+  +K   P A
Sbjct: 339 STYNALMDGYCLQRLMNEAKKVFEIMIRKGCAPGA 373



 Score = 65.1 bits (157), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 41/132 (31%), Positives = 67/132 (50%)

Query: 381 KLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIH 440
           KLL  M     +PN+V Y  LI     A  L  A ++F ++   G  PD  TY  +I   
Sbjct: 464 KLLKSMKEKKLEPNIVHYTILIEGMFIAGKLEVAKELFSKLFGDGTRPDIRTYTVMIKGL 523

Query: 441 AKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNL 500
            K G  D A D+++KM+  G  P++ +Y+V+I    +      A +L  EMV +    NL
Sbjct: 524 LKEGLSDEAYDLFRKMEDDGFLPNSCSYNVMIQGFLQNQDSSTAIRLIDEMVGKRFSVNL 583

Query: 501 VTYNIMIALQAK 512
            T+ +++ L+++
Sbjct: 584 STFQMLLDLESQ 595


>gi|356540375|ref|XP_003538665.1| PREDICTED: pentatricopeptide repeat-containing protein At3g18110,
           chloroplastic-like [Glycine max]
          Length = 1476

 Score =  158 bits (399), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 97/346 (28%), Positives = 178/346 (51%), Gaps = 25/346 (7%)

Query: 314 AEEALGNT----NYSMDAYQAN---QVLKQLQDHTVALGFFNWLRRQAGFKHDEHTYTTM 366
           AE ++G+T    N  M  Y  N     +K+L D          L R+ G   D  ++ T+
Sbjct: 241 AESSVGDTVQVYNAMMGVYARNGRFSKVKELLD----------LMRERGCVPDLVSFNTL 290

Query: 367 VGILGRARQFGAIN-----KLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQM 421
           +    ++   GA+      +LL+++ R G +P+++TYN LI +  R + L EA+ VF  M
Sbjct: 291 INARMKS---GAMEPNLALQLLNEVRRSGIRPDIITYNTLISACSRESNLEEAVAVFSDM 347

Query: 422 QVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHL 481
           +   C+PD  TY  +I ++ +      A +++K++++ G  PD  TY+ ++    + G+ 
Sbjct: 348 ESHRCQPDLWTYNAMISVYGRCARARKAEELFKELESKGFFPDAVTYNSLLYAFSREGNT 407

Query: 482 QAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIV 541
           +    +  EMV +G   + +TYN +I +  K   +  A+++YRDM+++G  PD VTY+++
Sbjct: 408 EKVRDICEEMVKRGFGQDEMTYNTIIHMYGKQGRHDQAMQIYRDMKSSGRNPDAVTYTVL 467

Query: 542 MEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGL 601
           ++ LG    ++EA  V +EM      P    Y  L+  + KAG   +A E +  M ++G+
Sbjct: 468 IDSLGKASKVEEAANVMSEMLDAGVKPTLHTYSALICAYAKAGKREEAEETFNCMRRSGI 527

Query: 602 RPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
           +P+    + +L  FLR  ++  A  L   M+  G  P    Y +++
Sbjct: 528 KPDRLAYSVMLDFFLRFNEMKKAMGLYHEMIREGFTPDNGLYEVMM 573



 Score =  147 bits (372), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 82/320 (25%), Positives = 169/320 (52%), Gaps = 5/320 (1%)

Query: 338 QDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVT 397
           Q+   AL  +  L  +  +  +     T++G+LG+A Q     ++  +         V  
Sbjct: 193 QNWQRALELYECLNLRHWYAPNARMVATILGVLGKANQEALAVEIFAR-AESSVGDTVQV 251

Query: 398 YNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLD--VAMDMYKK 455
           YN ++  Y R    ++  ++   M+  GC PD V++ TLI+   K+G ++  +A+ +  +
Sbjct: 252 YNAMMGVYARNGRFSKVKELLDLMRERGCVPDLVSFNTLINARMKSGAMEPNLALQLLNE 311

Query: 456 MQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARN 515
           ++ +G+ PD  TY+ +I+   +  +L+ A  +F +M +  C P+L TYN MI++  +   
Sbjct: 312 VRRSGIRPDIITYNTLISACSRESNLEEAVAVFSDMESHRCQPDLWTYNAMISVYGRCAR 371

Query: 516 YQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGL 575
            + A +L++++++ GF PD VTY+ ++      G  ++   +  EM ++ +  DE  Y  
Sbjct: 372 ARKAEELFKELESKGFFPDAVTYNSLLYAFSREGNTEKVRDICEEMVKRGFGQDEMTYNT 431

Query: 576 LVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLG 635
           ++ ++GK G   +A + Y  M  +G  P+  T   L+ +  +  ++ +A +++  ML+ G
Sbjct: 432 IIHMYGKQGRHDQAMQIYRDMKSSGRNPDAVTYTVLIDSLGKASKVEEAANVMSEMLDAG 491

Query: 636 LKPSLQTYTLLLSCCTEARS 655
           +KP+L TY+ L+  C  A++
Sbjct: 492 VKPTLHTYSALI--CAYAKA 509



 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 89/310 (28%), Positives = 150/310 (48%), Gaps = 2/310 (0%)

Query: 342 VALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRL 401
           +AL   N +RR +G + D  TY T++    R         +   M    CQP++ TYN +
Sbjct: 304 LALQLLNEVRR-SGIRPDIITYNTLISACSRESNLEEAVAVFSDMESHRCQPDLWTYNAM 362

Query: 402 IHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGL 461
           I  YGR     +A ++FK+++  G  PD VTY +L+   ++ G  +   D+ ++M   G 
Sbjct: 363 ISVYGRCARARKAEELFKELESKGFFPDAVTYNSLLYAFSREGNTEKVRDICEEMVKRGF 422

Query: 462 SPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALK 521
             D  TY+ II+  GK G    A Q++ +M + G  P+ VTY ++I    KA   + A  
Sbjct: 423 GQDEMTYNTIIHMYGKQGRHDQAMQIYRDMKSSGRNPDAVTYTVLIDSLGKASKVEEAAN 482

Query: 522 LYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWG 581
           +  +M +AG +P   TYS ++      G  +EAE  F  MRR    PD   Y +++D + 
Sbjct: 483 VMSEMLDAGVKPTLHTYSALICAYAKAGKREEAEETFNCMRRSGIKPDRLAYSVMLDFFL 542

Query: 582 KAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNL-GLKPSL 640
           +   ++KA   Y  M++ G  P+      ++ A +R         +++ M  L G+ P +
Sbjct: 543 RFNEMKKAMGLYHEMIREGFTPDNGLYEVMMHALVRENMWDVVDRIIRDMEELSGMNPQV 602

Query: 641 QTYTLLLSCC 650
            +  L+   C
Sbjct: 603 ISSVLVKGGC 612



 Score =  115 bits (288), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 116/563 (20%), Positives = 226/563 (40%), Gaps = 81/563 (14%)

Query: 352  RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
            RQ   K D   +  ++     +  +     + + M+RDG  P V + N L+ +      L
Sbjct: 801  RQRCSKMDRKVWNALIHAYAFSGCYERARAIFNTMMRDGPSPTVDSVNGLLQALIVDRRL 860

Query: 412  NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
            NE   V +++Q +G +  + +    ++  A+AG L     +Y  M+AAG  P    Y ++
Sbjct: 861  NELYVVIQELQDMGLKISKSSILLTLEAFAQAGNLFEVQKIYNGMKAAGYFPTMHVYRIM 920

Query: 472  INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF 531
            +  L K   ++    + CEM   G  P+L   N ++ L     +++S   +Y+ +Q+A  
Sbjct: 921  LRLLCKCKRVRDVETMLCEMEEAGFQPDLQICNSILKLYLGIEDFKSMGIIYQKIQDASL 980

Query: 532  EPDKVTYSIV-------------------MEVLGHCGYLD----------------EAEA 556
            +PD+ TY+ +                   M  LG    LD                +AE 
Sbjct: 981  KPDEETYNTLIIMYCRDRRPEEGFSLMNKMRSLGLEPKLDTYRSLITAFNKQRMYEQAEE 1040

Query: 557  VFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFL 616
            +F E+R   +  D   Y L++  +  +G+ RKA      M ++G+ P + T + L+ ++ 
Sbjct: 1041 LFEELRSNGYKLDRAFYHLMMKTYRTSGDHRKAENLLAIMKESGIEPTISTMHLLMVSYG 1100

Query: 617  RVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGF--CHELMAVSGHPAH 674
            + GQ  +A ++L+ +   G+      Y+ ++    + +  +  G     E+      P H
Sbjct: 1101 KSGQPEEAENVLKNLRTTGVVLDTLPYSSVIDAYLK-KGDFKAGIEKLTEMKEAGIEPDH 1159

Query: 675  --------------------MFLLSMPSPGPD---------GQNVRDHVGSFLEMMHSED 705
                                + L ++   G D          +++   V   LE +   +
Sbjct: 1160 RIWTCFIRAATLSEGTNEAIVLLNALQDAGFDLPIRLLKEKSESLVSEVDQCLERLEPVE 1219

Query: 706  RESKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAVKEKGMSYWLINLHVMSDGT 765
              +   LV+A+VD L    L+  A  V+++A ++++Y   +       W  +   +S G+
Sbjct: 1220 DNAAFNLVNALVDLLWAFELRATASWVFQLAIKRSIYRHDIFRVADKDWGADFRKLSAGS 1279

Query: 766  AVIALSRTLAWFRKQMLISGVGPSRIDIVTGWGRRSRVTGTSLVRQAVQELLHMFSFPFF 825
            A+ A   +L  + +        P  + ++TG    + V+  S ++  + E+      PF 
Sbjct: 1280 ALDA---SLQGYPE-------SPKSVVLITGTAEYNMVSLDSTLKACLWEM----GSPFL 1325

Query: 826  TENGNSGCFVGCGEPLNKWLLQS 848
                  G  V     L  WL  S
Sbjct: 1326 PCKTRQGILVAKAHSLRMWLKDS 1348



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 67/384 (17%), Positives = 153/384 (39%), Gaps = 4/384 (1%)

Query: 363  YTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQ 422
            Y +++    +   F   +++   M  +G + +   Y  ++  Y R +    A  +    +
Sbjct: 705  YESLIQECIQNELFDVASQIFSDMRFNGVESSECLYQGMVSVYCRMDLPETAHHLLYHAE 764

Query: 423  VVGC--EPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGH 480
              G   + D   Y  +++ + K      A  +   ++      D   ++ +I+    +G 
Sbjct: 765  KNGIILDNDISVYIDIVETYGKLKIWQKAESLVGSLRQRCSKMDRKVWNALIHAYAFSGC 824

Query: 481  LQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSI 540
             + A  +F  M+  G  P + + N ++      R       + +++Q+ G +  K +  +
Sbjct: 825  YERARAIFNTMMRDGPSPTVDSVNGLLQALIVDRRLNELYVVIQELQDMGLKISKSSILL 884

Query: 541  VMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAG 600
             +E     G L E + ++  M+   + P   VY +++ L  K   VR        M +AG
Sbjct: 885  TLEAFAQAGNLFEVQKIYNGMKAAGYFPTMHVYRIMLRLLCKCKRVRDVETMLCEMEEAG 944

Query: 601  LRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTY-TLLLSCCTEARSPYDM 659
             +P++  CNS+L  +L +        + Q + +  LKP  +TY TL++  C + R     
Sbjct: 945  FQPDLQICNSILKLYLGIEDFKSMGIIYQKIQDASLKPDEETYNTLIIMYCRDRRPEEGF 1004

Query: 660  GFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRESKRGLVDAVVDF 719
               +++ ++   P      S+ +   + Q + +      E + S   +  R     ++  
Sbjct: 1005 SLMNKMRSLGLEPKLDTYRSLIT-AFNKQRMYEQAEELFEELRSNGYKLDRAFYHLMMKT 1063

Query: 720  LHKSGLKEEAGSVWEVAAQKNVYP 743
               SG   +A ++  +  +  + P
Sbjct: 1064 YRTSGDHRKAENLLAIMKESGIEP 1087



 Score = 55.1 bits (131), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 53/271 (19%), Positives = 106/271 (39%), Gaps = 33/271 (12%)

Query: 401 LIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAG 460
           LI    +A  L+ AL+ ++    +G       Y +LI    +    DVA  ++  M+  G
Sbjct: 673 LIIILCKAKKLDAALEEYRSKGELGQFRSCTMYESLIQECIQNELFDVASQIFSDMRFNG 732

Query: 461 LSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSAL 520
           +      Y  +++   +    + AH L       G I                       
Sbjct: 733 VESSECLYQGMVSVYCRMDLPETAHHLLYHAEKNGII----------------------- 769

Query: 521 KLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLW 580
                      + D   Y  ++E  G      +AE++   +R++    D  V+  L+  +
Sbjct: 770 ----------LDNDISVYIDIVETYGKLKIWQKAESLVGSLRQRCSKMDRKVWNALIHAY 819

Query: 581 GKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSL 640
             +G   +A   +  M++ G  P V + N LL A +   +L++ Y ++Q + ++GLK S 
Sbjct: 820 AFSGCYERARAIFNTMMRDGPSPTVDSVNGLLQALIVDRRLNELYVVIQELQDMGLKISK 879

Query: 641 QTYTLLLSCCTEARSPYDMGFCHELMAVSGH 671
            +  L L    +A + +++   +  M  +G+
Sbjct: 880 SSILLTLEAFAQAGNLFEVQKIYNGMKAAGY 910


>gi|218194139|gb|EEC76566.1| hypothetical protein OsI_14394 [Oryza sativa Indica Group]
          Length = 701

 Score =  157 bits (398), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 126/542 (23%), Positives = 230/542 (42%), Gaps = 29/542 (5%)

Query: 317 ALGNTNYSMDAYQANQVLKQL-------QDHTVALGFFNWLRRQAGFKHDEHTYTTMVGI 369
           AL +  + +D    N  LK L       Q   +AL         +G   D  TY+T++  
Sbjct: 165 ALPDGAFPLDTIVFNVALKSLRAARQWPQAERLALDML-----ASGVPLDNITYSTLITA 219

Query: 370 LGRARQFGAINKLLDQM-VRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEP 428
             R RQF    +  ++M   DG  P+ VTY+ ++  Y +     E L +F + +  G +P
Sbjct: 220 ARRCRQFDKAVEWFERMYASDGVLPDEVTYSAILDVYAQLGMKEEVLALFDRARGSGWKP 279

Query: 429 DRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLF 488
           D V +  L  +  +AG  D    ++K+M+  G+ P+ F Y+ ++  LGK G    A  LF
Sbjct: 280 DHVAFAVLAKMFGEAGDYDGIQFVFKEMREVGIKPNIFVYNALLEALGKTGKPGLARNLF 339

Query: 489 CEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHC 548
            EM  +G  PN  T   +  +  +AR  + AL+L+  M+      D +  + ++ +    
Sbjct: 340 EEMTAEGVEPNARTLTALAKIYGRARWGRDALQLWEQMREKKLPADNILCNTLLSMCADV 399

Query: 549 GYLDEAEAVFAEMRRKNW----VPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPN 604
           G + EAE +F+EM+  +      PD+  Y  +++++G +G+  +A + +  M+++G+ PN
Sbjct: 400 GLVGEAEQLFSEMKDPDLGDVPKPDKWSYTAMINIYGSSGDADRALQLFAEMVESGIEPN 459

Query: 605 VPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGFCHE 664
           + +   ++    + G++ +A  +L+  +  GLKP  +    LLS    +           
Sbjct: 460 IMSYTIVIQCLGKAGRIQEAVDVLEAGMAKGLKPDDRLCGCLLSVVALSSGDETEVILAC 519

Query: 665 LMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRESKRGLVDAVVDFLHKSG 724
           L  V  +   +  +     G     V D       +++S   E +R   + ++D     G
Sbjct: 520 LEKVRSNLVKLIRML----GDARVGVEDLRVELKGILNSAAPEVRRPYCNCLIDICRNHG 575

Query: 725 L-KEEAGSVWEVAAQKNVYPDAVKEKGMSYWLINLHVMSDGTAVIALSRTLAWFRKQMLI 783
              E A  ++ +A    +Y   +  +    W ++L  +S G A  A    +   R+    
Sbjct: 576 YPSERAVELFRLARHYGLY-SKIHTRKEEEWSLDLRSLSVGAAKTAFDDWMKTIREH--- 631

Query: 784 SGVGPSRIDIVTGWGRRSRVTGTSLVRQAVQELLHMFSFPFFTENGNSGCFVGCGEPLNK 843
               P    + TG        G +    AV   L     PF   +   G F+   + L  
Sbjct: 632 EEALPQTFSVYTGSSTHKFAQGLA---TAVASHLEQVGAPFRASDSQLGSFISSRDDLLS 688

Query: 844 WL 845
           WL
Sbjct: 689 WL 690



 Score = 40.8 bits (94), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 48/241 (19%), Positives = 94/241 (39%), Gaps = 5/241 (2%)

Query: 509 LQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVP 568
           L    R   S L   R + +  F  D + +++ ++ L       +AE +  +M       
Sbjct: 149 LHPSWRKSLSLLCWLRALPDGAFPLDTIVFNVALKSLRAARQWPQAERLALDMLASGVPL 208

Query: 569 DEPVYGLLVDLWGKAGNVRKAWEWYEAMLQA-GLRPNVPTCNSLLSAFLRVGQLSDAYHL 627
           D   Y  L+    +     KA EW+E M  + G+ P+  T +++L  + ++G   +   L
Sbjct: 209 DNITYSTLITAARRCRQFDKAVEWFERMYASDGVLPDEVTYSAILDVYAQLGMKEEVLAL 268

Query: 628 LQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGFCHELMAVSGHPAHMFLLS--MPSPGP 685
                  G KP    + +L     EA     + F  + M   G   ++F+ +  + + G 
Sbjct: 269 FDRARGSGWKPDHVAFAVLAKMFGEAGDYDGIQFVFKEMREVGIKPNIFVYNALLEALGK 328

Query: 686 DGQNVRDHVGSFLEMMHSEDRESKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDA 745
            G+       +  E M +E  E     + A+     ++    +A  +WE   +K +  D 
Sbjct: 329 TGKP--GLARNLFEEMTAEGVEPNARTLTALAKIYGRARWGRDALQLWEQMREKKLPADN 386

Query: 746 V 746
           +
Sbjct: 387 I 387


>gi|356499079|ref|XP_003518371.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g09680-like [Glycine max]
          Length = 615

 Score =  157 bits (398), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 87/262 (33%), Positives = 145/262 (55%)

Query: 386 MVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGF 445
           M  +G  P+V T++ LI+   +   L+E   +F +M   G  P+ VT+ TLID   K G 
Sbjct: 309 MESEGVCPDVFTFSALINGLCKEGRLDEGSLLFDEMCGRGLVPNGVTFTTLIDGQCKGGK 368

Query: 446 LDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNI 505
           +D+A+  ++ M A G+ PD  TY+ +IN L K G L+ A +L  EM   G  P+ +T+  
Sbjct: 369 VDLALKNFQMMLAQGVRPDLVTYNALINGLCKVGDLKEARRLVNEMTASGLKPDKITFTT 428

Query: 506 MIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKN 565
           +I    K  + +SAL++ R M   G E D V ++ ++  L   G + +A  +  +M    
Sbjct: 429 LIDGCCKDGDMESALEIKRRMVEEGIELDDVAFTALISGLCREGRVHDAGRMLTDMLSAG 488

Query: 566 WVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAY 625
           + PD+P Y +++D + K G+V+  ++  + M   G  P V T N+L++   + GQ+ +A 
Sbjct: 489 FKPDDPTYTMVIDCFCKKGDVKMGFKLLKEMQSDGHVPGVVTYNALMNGLCKQGQMKNAK 548

Query: 626 HLLQGMLNLGLKPSLQTYTLLL 647
            LL  MLN+G+ P+  TY +LL
Sbjct: 549 MLLDAMLNVGVAPNDITYNILL 570



 Score =  146 bits (369), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 88/277 (31%), Positives = 140/277 (50%), Gaps = 1/277 (0%)

Query: 385 QMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAG 444
           +++  G  P +  +N L+H + +A  +  A  VF ++   G  P  V++ TLI    K+G
Sbjct: 238 EVLDSGYPPKIYFFNVLMHGFCKAGDVGNARLVFDEIPKRGLRPTVVSFNTLISGCCKSG 297

Query: 445 FLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYN 504
            ++    +   M++ G+ PD FT+S +IN L K G L     LF EM  +G +PN VT+ 
Sbjct: 298 DVEEGFRLKGVMESEGVCPDVFTFSALINGLCKEGRLDEGSLLFDEMCGRGLVPNGVTFT 357

Query: 505 IMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRK 564
            +I  Q K      ALK ++ M   G  PD VTY+ ++  L   G L EA  +  EM   
Sbjct: 358 TLIDGQCKGGKVDLALKNFQMMLAQGVRPDLVTYNALINGLCKVGDLKEARRLVNEMTAS 417

Query: 565 NWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDA 624
              PD+  +  L+D   K G++  A E    M++ G+  +     +L+S   R G++ DA
Sbjct: 418 GLKPDKITFTTLIDGCCKDGDMESALEIKRRMVEEGIELDDVAFTALISGLCREGRVHDA 477

Query: 625 YHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGF 661
             +L  ML+ G KP   TYT+++ C  + +    MGF
Sbjct: 478 GRMLTDMLSAGFKPDDPTYTMVIDCFCK-KGDVKMGF 513



 Score =  122 bits (305), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 91/342 (26%), Positives = 161/342 (47%), Gaps = 39/342 (11%)

Query: 344 LGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMV-RDGCQ---------- 392
           L FFN L  +  F+H  H+Y TM+  L   R     + L+  +V R G            
Sbjct: 103 LSFFNHLASRPPFRHTLHSYCTMLHFLCLHRMLPQAHSLVSFLVSRKGTNSASTLFSSIL 162

Query: 393 ---PNV--------VTYNRLIHSYGRANYLNEALDVFKQMQ-------VVGCEP--DRVT 432
              P          + ++ LI +Y  + +  +A+  F+ +        + GCE    RV 
Sbjct: 163 RTMPRHHHHHHSVGLVFDALISAYVDSGFTPDAVQCFRLVTKNKFPVPIRGCENLLRRVV 222

Query: 433 YCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMV 492
               ++I       + +  +Y ++  +G  P  + ++V+++   KAG +  A  +F E+ 
Sbjct: 223 RLRPVEI-------ERSWALYLEVLDSGYPPKIYFFNVLMHGFCKAGDVGNARLVFDEIP 275

Query: 493 NQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLD 552
            +G  P +V++N +I+   K+ + +   +L   M++ G  PD  T+S ++  L   G LD
Sbjct: 276 KRGLRPTVVSFNTLISGCCKSGDVEEGFRLKGVMESEGVCPDVFTFSALINGLCKEGRLD 335

Query: 553 EAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLL 612
           E   +F EM  +  VP+   +  L+D   K G V  A + ++ ML  G+RP++ T N+L+
Sbjct: 336 EGSLLFDEMCGRGLVPNGVTFTTLIDGQCKGGKVDLALKNFQMMLAQGVRPDLVTYNALI 395

Query: 613 SAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS-CCTEA 653
           +   +VG L +A  L+  M   GLKP   T+T L+  CC + 
Sbjct: 396 NGLCKVGDLKEARRLVNEMTASGLKPDKITFTTLIDGCCKDG 437



 Score =  121 bits (303), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 79/270 (29%), Positives = 129/270 (47%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           G   D  T++ ++  L +  +    + L D+M   G  PN VT+  LI    +   ++ A
Sbjct: 313 GVCPDVFTFSALINGLCKEGRLDEGSLLFDEMCGRGLVPNGVTFTTLIDGQCKGGKVDLA 372

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
           L  F+ M   G  PD VTY  LI+   K G L  A  +  +M A+GL PD  T++ +I+ 
Sbjct: 373 LKNFQMMLAQGVRPDLVTYNALINGLCKVGDLKEARRLVNEMTASGLKPDKITFTTLIDG 432

Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPD 534
             K G +++A ++   MV +G   + V +  +I+   +      A ++  DM +AGF+PD
Sbjct: 433 CCKDGDMESALEIKRRMVEEGIELDDVAFTALISGLCREGRVHDAGRMLTDMLSAGFKPD 492

Query: 535 KVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYE 594
             TY++V++     G +     +  EM+    VP    Y  L++   K G ++ A    +
Sbjct: 493 DPTYTMVIDCFCKKGDVKMGFKLLKEMQSDGHVPGVVTYNALMNGLCKQGQMKNAKMLLD 552

Query: 595 AMLQAGLRPNVPTCNSLLSAFLRVGQLSDA 624
           AML  G+ PN  T N LL    + G   D 
Sbjct: 553 AMLNVGVAPNDITYNILLDGHSKHGSSVDV 582



 Score = 99.8 bits (247), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 60/206 (29%), Positives = 104/206 (50%), Gaps = 3/206 (1%)

Query: 342 VALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRL 401
           +AL  F  +  Q G + D  TY  ++  L +        +L+++M   G +P+ +T+  L
Sbjct: 371 LALKNFQMMLAQ-GVRPDLVTYNALINGLCKVGDLKEARRLVNEMTASGLKPDKITFTTL 429

Query: 402 IHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGL 461
           I    +   +  AL++ ++M   G E D V +  LI    + G +  A  M   M +AG 
Sbjct: 430 IDGCCKDGDMESALEIKRRMVEEGIELDDVAFTALISGLCREGRVHDAGRMLTDMLSAGF 489

Query: 462 SPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALK 521
            PD  TY+++I+C  K G ++   +L  EM + G +P +VTYN ++    K    ++A  
Sbjct: 490 KPDDPTYTMVIDCFCKKGDVKMGFKLLKEMQSDGHVPGVVTYNALMNGLCKQGQMKNAKM 549

Query: 522 LYRDMQNAGFEPDKVTYSIVMEVLGH 547
           L   M N G  P+ +TY+I+++  GH
Sbjct: 550 LLDAMLNVGVAPNDITYNILLD--GH 573



 Score = 53.5 bits (127), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 35/163 (21%), Positives = 76/163 (46%), Gaps = 7/163 (4%)

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
           + G + D+  +T ++  L R  +     ++L  M+  G +P+  TY  +I  + +   + 
Sbjct: 451 EEGIELDDVAFTALISGLCREGRVHDAGRMLTDMLSAGFKPDDPTYTMVIDCFCKKGDVK 510

Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
               + K+MQ  G  P  VTY  L++   K G +  A  +   M   G++P+  TY++++
Sbjct: 511 MGFKLLKEMQSDGHVPGVVTYNALMNGLCKQGQMKNAKMLLDAMLNVGVAPNDITYNILL 570

Query: 473 NCLGKAGHLQAAHQLFCEMVN--QGCIPNLVTYNIMIALQAKA 513
           +     GH +    +  ++ N  +G + +  +Y  ++   +K 
Sbjct: 571 D-----GHSKHGSSVDVDIFNSEKGLVTDYASYTALVNESSKT 608


>gi|224107129|ref|XP_002314384.1| predicted protein [Populus trichocarpa]
 gi|222863424|gb|EEF00555.1| predicted protein [Populus trichocarpa]
          Length = 764

 Score =  157 bits (398), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 102/355 (28%), Positives = 167/355 (47%), Gaps = 37/355 (10%)

Query: 334 LKQLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQP 393
           L ++ +    L  FN ++ + G++ + H  TT++ +  R  +  A   LLD+M  +    
Sbjct: 71  LSEVGESDRMLALFNQMQ-ELGYEVNVHLLTTLIRVFSREGRVDAALSLLDEMKSNTFDA 129

Query: 394 NVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMY 453
           ++V YN  I  +G+   ++ A   F +M+  G  PD VTY +++ +  KA  LD A++++
Sbjct: 130 DIVLYNVCIDCFGKVGKVDMAWKFFHEMKANGLVPDDVTYTSMMGVLCKANRLDEAVEIF 189

Query: 454 KKMQ-----------------------------------AAGLSPDTFTYSVIINCLGKA 478
           ++M+                                   A G  P    Y+ I+ CLGK 
Sbjct: 190 EQMEQNRQVPCAYAYNTMIMGYGSAGKFDEAYSLLERQRAKGCIPSVVAYNCILTCLGKK 249

Query: 479 GHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTY 538
           G    A ++F EM  +  +PNL TYNI+I +  KA N ++A K+   M+ AG  P+  T 
Sbjct: 250 GKTDKALRIFEEM-KRDAMPNLPTYNIIIGMLCKAGNVEAAFKVRDAMKEAGLFPNVRTI 308

Query: 539 SIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQ 598
           +I+++ L     LDEA ++F  M  K   PD   +  L+D  GK G V  A+  YE ML 
Sbjct: 309 NIMIDRLCKAQKLDEACSIFEGMDYKVCSPDGATFCSLIDGLGKQGRVDDAYRIYERMLD 368

Query: 599 AGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEA 653
           A   PNV    SL+  F +  +  D + + + M+  G  P L      + C  +A
Sbjct: 369 ADQIPNVVVYTSLIRNFFKCDRKEDGHKMYKEMMRSGCSPDLMLLNTYMDCVFKA 423



 Score =  155 bits (393), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 89/296 (30%), Positives = 157/296 (53%)

Query: 359 DEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVF 418
           D  T+ +++  LG+  +     ++ ++M+     PNVV Y  LI ++ + +   +   ++
Sbjct: 339 DGATFCSLIDGLGKQGRVDDAYRIYERMLDADQIPNVVVYTSLIRNFFKCDRKEDGHKMY 398

Query: 419 KQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKA 478
           K+M   GC PD +   T +D   KAG  +    ++++++A G  PDT +YS++I+ L KA
Sbjct: 399 KEMMRSGCSPDLMLLNTYMDCVFKAGETEKGRALFEEIKARGFLPDTRSYSILIHSLVKA 458

Query: 479 GHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTY 538
           G  +  ++L+  M +QGC+ +   YN +I    K+     A +L  +M+  G  P  VTY
Sbjct: 459 GFARETYELYYAMKDQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTMGHHPTVVTY 518

Query: 539 SIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQ 598
             V++ L     LDEA  +F E +      ++ +Y  L+D +GK G V +A+   E M+Q
Sbjct: 519 GSVVDGLAKIDRLDEAYMLFEEAKSNGIELNQVIYSSLIDGFGKVGRVDEAYLVMEEMMQ 578

Query: 599 AGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEAR 654
            GL PNV T N LL   ++  ++++A    Q M +L   P+  TY +L++   + R
Sbjct: 579 KGLTPNVYTWNCLLDGLVKAEEINEALVCFQSMKDLKCTPNQITYCILINGLCKVR 634



 Score =  149 bits (375), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 91/305 (29%), Positives = 153/305 (50%), Gaps = 2/305 (0%)

Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLI 402
           AL  F  ++R A    +  TY  ++G+L +A    A  K+ D M   G  PNV T N +I
Sbjct: 255 ALRIFEEMKRDA--MPNLPTYNIIIGMLCKAGNVEAAFKVRDAMKEAGLFPNVRTINIMI 312

Query: 403 HSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLS 462
               +A  L+EA  +F+ M    C PD  T+C+LID   K G +D A  +Y++M  A   
Sbjct: 313 DRLCKAQKLDEACSIFEGMDYKVCSPDGATFCSLIDGLGKQGRVDDAYRIYERMLDADQI 372

Query: 463 PDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKL 522
           P+   Y+ +I    K    +  H+++ EM+  GC P+L+  N  +    KA   +    L
Sbjct: 373 PNVVVYTSLIRNFFKCDRKEDGHKMYKEMMRSGCSPDLMLLNTYMDCVFKAGETEKGRAL 432

Query: 523 YRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGK 582
           + +++  GF PD  +YSI++  L   G+  E   ++  M+ +  V D   Y  ++D + K
Sbjct: 433 FEEIKARGFLPDTRSYSILIHSLVKAGFARETYELYYAMKDQGCVLDTRAYNTVIDGFCK 492

Query: 583 AGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQT 642
           +G V KA++  E M   G  P V T  S++    ++ +L +AY L +   + G++ +   
Sbjct: 493 SGKVNKAYQLLEEMKTMGHHPTVVTYGSVVDGLAKIDRLDEAYMLFEEAKSNGIELNQVI 552

Query: 643 YTLLL 647
           Y+ L+
Sbjct: 553 YSSLI 557



 Score =  143 bits (361), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 87/282 (30%), Positives = 140/282 (49%), Gaps = 1/282 (0%)

Query: 350 LRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRAN 409
           + R   F+     YTT++G L    +   +  L +QM   G + NV     LI  + R  
Sbjct: 51  MMRHFKFRPAFSAYTTLIGALSEVGESDRMLALFNQMQELGYEVNVHLLTTLIRVFSREG 110

Query: 410 YLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYS 469
            ++ AL +  +M+    + D V Y   ID   K G +D+A   + +M+A GL PD  TY+
Sbjct: 111 RVDAALSLLDEMKSNTFDADIVLYNVCIDCFGKVGKVDMAWKFFHEMKANGLVPDDVTYT 170

Query: 470 VIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNA 529
            ++  L KA  L  A ++F +M     +P    YN MI     A  +  A  L    +  
Sbjct: 171 SMMGVLCKANRLDEAVEIFEQMEQNRQVPCAYAYNTMIMGYGSAGKFDEAYSLLERQRAK 230

Query: 530 GFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKA 589
           G  P  V Y+ ++  LG  G  D+A  +F EM+R + +P+ P Y +++ +  KAGNV  A
Sbjct: 231 GCIPSVVAYNCILTCLGKKGKTDKALRIFEEMKR-DAMPNLPTYNIIIGMLCKAGNVEAA 289

Query: 590 WEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGM 631
           ++  +AM +AGL PNV T N ++    +  +L +A  + +GM
Sbjct: 290 FKVRDAMKEAGLFPNVRTINIMIDRLCKAQKLDEACSIFEGM 331



 Score =  142 bits (358), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 107/438 (24%), Positives = 193/438 (44%), Gaps = 37/438 (8%)

Query: 342 VALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRL 401
           +A  FF+ ++   G   D+ TYT+M+G+L +A +     ++ +QM ++   P    YN +
Sbjct: 149 MAWKFFHEMKAN-GLVPDDVTYTSMMGVLCKANRLDEAVEIFEQMEQNRQVPCAYAYNTM 207

Query: 402 IHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGL 461
           I  YG A   +EA  + ++ +  GC P  V Y  ++    K G  D A+ ++++M+   +
Sbjct: 208 IMGYGSAGKFDEAYSLLERQRAKGCIPSVVAYNCILTCLGKKGKTDKALRIFEEMKRDAM 267

Query: 462 SPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALK 521
            P+  TY++II  L KAG+++AA ++   M   G  PN+ T NIMI    KA+    A  
Sbjct: 268 -PNLPTYNIIIGMLCKAGNVEAAFKVRDAMKEAGLFPNVRTINIMIDRLCKAQKLDEACS 326

Query: 522 LYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWG 581
           ++  M      PD  T+  +++ LG  G +D+A  ++  M   + +P+  VY  L+  + 
Sbjct: 327 IFEGMDYKVCSPDGATFCSLIDGLGKQGRVDDAYRIYERMLDADQIPNVVVYTSLIRNFF 386

Query: 582 KAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQ 641
           K        + Y+ M+++G  P++   N+ +    + G+      L + +   G  P  +
Sbjct: 387 KCDRKEDGHKMYKEMMRSGCSPDLMLLNTYMDCVFKAGETEKGRALFEEIKARGFLPDTR 446

Query: 642 TYTLLLSCCTE---ARSPYDM---------------------GFCH-----------ELM 666
           +Y++L+    +   AR  Y++                     GFC            E M
Sbjct: 447 SYSILIHSLVKAGFARETYELYYAMKDQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEM 506

Query: 667 AVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRESKRGLVDAVVDFLHKSGLK 726
              GH   +        G    +  D      E   S   E  + +  +++D   K G  
Sbjct: 507 KTMGHHPTVVTYGSVVDGLAKIDRLDEAYMLFEEAKSNGIELNQVIYSSLIDGFGKVGRV 566

Query: 727 EEAGSVWEVAAQKNVYPD 744
           +EA  V E   QK + P+
Sbjct: 567 DEAYLVMEEMMQKGLTPN 584



 Score =  129 bits (324), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 79/269 (29%), Positives = 135/269 (50%)

Query: 380 NKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDI 439
           +K+  +M+R GC P+++  N  +    +A    +   +F++++  G  PD  +Y  LI  
Sbjct: 395 HKMYKEMMRSGCSPDLMLLNTYMDCVFKAGETEKGRALFEEIKARGFLPDTRSYSILIHS 454

Query: 440 HAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPN 499
             KAGF     ++Y  M+  G   DT  Y+ +I+   K+G +  A+QL  EM   G  P 
Sbjct: 455 LVKAGFARETYELYYAMKDQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTMGHHPT 514

Query: 500 LVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFA 559
           +VTY  ++   AK      A  L+ + ++ G E ++V YS +++  G  G +DEA  V  
Sbjct: 515 VVTYGSVVDGLAKIDRLDEAYMLFEEAKSNGIELNQVIYSSLIDGFGKVGRVDEAYLVME 574

Query: 560 EMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVG 619
           EM +K   P+   +  L+D   KA  + +A   +++M      PN  T   L++   +V 
Sbjct: 575 EMMQKGLTPNVYTWNCLLDGLVKAEEINEALVCFQSMKDLKCTPNQITYCILINGLCKVR 634

Query: 620 QLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
           + + A+   Q M   GLKP+  TYT ++S
Sbjct: 635 KFNKAFVFWQEMQKQGLKPNTITYTAMIS 663



 Score =  129 bits (323), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 74/276 (26%), Positives = 136/276 (49%)

Query: 349 WLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRA 408
           +  +  G   D   Y T++    ++ +     +LL++M   G  P VVTY  ++    + 
Sbjct: 469 YAMKDQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTMGHHPTVVTYGSVVDGLAKI 528

Query: 409 NYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTY 468
           + L+EA  +F++ +  G E ++V Y +LID   K G +D A  + ++M   GL+P+ +T+
Sbjct: 529 DRLDEAYMLFEEAKSNGIELNQVIYSSLIDGFGKVGRVDEAYLVMEEMMQKGLTPNVYTW 588

Query: 469 SVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQN 528
           + +++ L KA  +  A   F  M +  C PN +TY I+I    K R +  A   +++MQ 
Sbjct: 589 NCLLDGLVKAEEINEALVCFQSMKDLKCTPNQITYCILINGLCKVRKFNKAFVFWQEMQK 648

Query: 529 AGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRK 588
            G +P+ +TY+ ++  L   G + +A ++F   R    +PD   Y  +++    A     
Sbjct: 649 QGLKPNTITYTAMISGLAKSGNVAQASSLFERFRASGGIPDSASYNAMIEGLSIANRALD 708

Query: 589 AWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDA 624
           A++ +E     G   +  TC +LL A  +   L  A
Sbjct: 709 AYQLFEETRLKGCSIHTKTCVALLDALHKAECLEQA 744



 Score =  118 bits (296), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 70/275 (25%), Positives = 139/275 (50%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           GF  D  +Y+ ++  L +A       +L   M   GC  +   YN +I  + ++  +N+A
Sbjct: 440 GFLPDTRSYSILIHSLVKAGFARETYELYYAMKDQGCVLDTRAYNTVIDGFCKSGKVNKA 499

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
             + ++M+ +G  P  VTY +++D  AK   LD A  ++++ ++ G+  +   YS +I+ 
Sbjct: 500 YQLLEEMKTMGHHPTVVTYGSVVDGLAKIDRLDEAYMLFEEAKSNGIELNQVIYSSLIDG 559

Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPD 534
            GK G +  A+ +  EM+ +G  PN+ T+N ++    KA     AL  ++ M++    P+
Sbjct: 560 FGKVGRVDEAYLVMEEMMQKGLTPNVYTWNCLLDGLVKAEEINEALVCFQSMKDLKCTPN 619

Query: 535 KVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYE 594
           ++TY I++  L      ++A   + EM+++   P+   Y  ++    K+GNV +A   +E
Sbjct: 620 QITYCILINGLCKVRKFNKAFVFWQEMQKQGLKPNTITYTAMISGLAKSGNVAQASSLFE 679

Query: 595 AMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQ 629
               +G  P+  + N+++       +  DAY L +
Sbjct: 680 RFRASGGIPDSASYNAMIEGLSIANRALDAYQLFE 714



 Score =  111 bits (278), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 75/276 (27%), Positives = 125/276 (45%), Gaps = 1/276 (0%)

Query: 372 RARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRV 431
           R R F  + ++L +M   G  P   T   L+ S  ++  L EA D+ + M+     P   
Sbjct: 3   RTRNFDYLEQILGEMSIAGFGPTNYTCVELVASCVKSRKLIEAFDLLQMMRHFKFRPAFS 62

Query: 432 TYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEM 491
            Y TLI   ++ G  D  + ++ +MQ  G   +    + +I    + G + AA  L  EM
Sbjct: 63  AYTTLIGALSEVGESDRMLALFNQMQELGYEVNVHLLTTLIRVFSREGRVDAALSLLDEM 122

Query: 492 VNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYL 551
            +     ++V YN+ I    K      A K + +M+  G  PD VTY+ +M VL     L
Sbjct: 123 KSNTFDADIVLYNVCIDCFGKVGKVDMAWKFFHEMKANGLVPDDVTYTSMMGVLCKANRL 182

Query: 552 DEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSL 611
           DEA  +F +M +   VP    Y  ++  +G AG   +A+   E     G  P+V   N +
Sbjct: 183 DEAVEIFEQMEQNRQVPCAYAYNTMIMGYGSAGKFDEAYSLLERQRAKGCIPSVVAYNCI 242

Query: 612 LSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
           L+   + G+   A  + + M    + P+L TY +++
Sbjct: 243 LTCLGKKGKTDKALRIFEEMKRDAM-PNLPTYNIII 277



 Score =  101 bits (251), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 60/208 (28%), Positives = 110/208 (52%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           G + ++  Y++++   G+  +      ++++M++ G  PNV T+N L+    +A  +NEA
Sbjct: 545 GIELNQVIYSSLIDGFGKVGRVDEAYLVMEEMMQKGLTPNVYTWNCLLDGLVKAEEINEA 604

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
           L  F+ M+ + C P+++TYC LI+   K    + A   +++MQ  GL P+T TY+ +I+ 
Sbjct: 605 LVCFQSMKDLKCTPNQITYCILINGLCKVRKFNKAFVFWQEMQKQGLKPNTITYTAMISG 664

Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPD 534
           L K+G++  A  LF      G IP+  +YN MI   + A     A +L+ + +  G    
Sbjct: 665 LAKSGNVAQASSLFERFRASGGIPDSASYNAMIEGLSIANRALDAYQLFEETRLKGCSIH 724

Query: 535 KVTYSIVMEVLGHCGYLDEAEAVFAEMR 562
             T   +++ L     L++A  V A +R
Sbjct: 725 TKTCVALLDALHKAECLEQAAIVGAVLR 752



 Score = 68.9 bits (167), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 58/209 (27%), Positives = 101/209 (48%), Gaps = 13/209 (6%)

Query: 295 GNVVESVSRILRQWKWGPLAEEALGNTNYSMDAYQANQVL-KQLQDHTVALGFFN--WL- 350
           G+VV+ +++I R  +   L EEA  N        + NQV+   L D    +G  +  +L 
Sbjct: 519 GSVVDGLAKIDRLDEAYMLFEEAKSN------GIELNQVIYSSLIDGFGKVGRVDEAYLV 572

Query: 351 ---RRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGR 407
                Q G   + +T+  ++  L +A +          M    C PN +TY  LI+   +
Sbjct: 573 MEEMMQKGLTPNVYTWNCLLDGLVKAEEINEALVCFQSMKDLKCTPNQITYCILINGLCK 632

Query: 408 ANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFT 467
               N+A   +++MQ  G +P+ +TY  +I   AK+G +  A  ++++ +A+G  PD+ +
Sbjct: 633 VRKFNKAFVFWQEMQKQGLKPNTITYTAMISGLAKSGNVAQASSLFERFRASGGIPDSAS 692

Query: 468 YSVIINCLGKAGHLQAAHQLFCEMVNQGC 496
           Y+ +I  L  A     A+QLF E   +GC
Sbjct: 693 YNAMIEGLSIANRALDAYQLFEETRLKGC 721



 Score = 42.7 bits (99), Expect = 0.91,   Method: Compositional matrix adjust.
 Identities = 30/116 (25%), Positives = 55/116 (47%), Gaps = 1/116 (0%)

Query: 334 LKQLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQP 393
           L +++    A  F+  +++Q G K +  TYT M+  L ++      + L ++    G  P
Sbjct: 630 LCKVRKFNKAFVFWQEMQKQ-GLKPNTITYTAMISGLAKSGNVAQASSLFERFRASGGIP 688

Query: 394 NVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVA 449
           +  +YN +I     AN   +A  +F++ ++ GC     T   L+D   KA  L+ A
Sbjct: 689 DSASYNAMIEGLSIANRALDAYQLFEETRLKGCSIHTKTCVALLDALHKAECLEQA 744


>gi|30794106|gb|AAP40495.1| unknown protein [Arabidopsis thaliana]
          Length = 974

 Score =  157 bits (398), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 99/288 (34%), Positives = 148/288 (51%), Gaps = 2/288 (0%)

Query: 361 HTYTTMV-GILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFK 419
           +TY T+V G+       GA N ++ +M+  GC+PNVV Y  LI ++ + +   +A+ V K
Sbjct: 418 YTYGTVVKGMCSSGDLDGAYN-IVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLK 476

Query: 420 QMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAG 479
           +M+  G  PD   Y +LI   +KA  +D A     +M   GL P+ FTY   I+   +A 
Sbjct: 477 EMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEAS 536

Query: 480 HLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYS 539
              +A +   EM   G +PN V    +I    K      A   YR M + G   D  TY+
Sbjct: 537 EFASADKYVKEMRECGVLPNKVLCTGLINEYCKKEKVIEACSAYRSMVDQGILGDAKTYT 596

Query: 540 IVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQA 599
           ++M  L     +D+AE +F EMR K   PD   YG+L++ + K GN++KA   ++ M++ 
Sbjct: 597 VLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEE 656

Query: 600 GLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
           GL PNV   N LL  F R G++  A  LL  M   GL P+  TY  ++
Sbjct: 657 GLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTII 704



 Score =  139 bits (350), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 91/340 (26%), Positives = 156/340 (45%), Gaps = 43/340 (12%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           R  G   D  +Y  ++    +       + + D+MV +G  PNV+ YN L+  + R+  +
Sbjct: 619 RGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEI 678

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
            +A ++  +M V G  P+ VTYCT+ID + K+G L  A  ++ +M+  GL PD+F Y+ +
Sbjct: 679 EKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTL 738

Query: 472 INCLGKAGHLQAAHQLF------------------------------CEMVNQ---GCI- 497
           ++   +   ++ A  +F                               E++N+   G   
Sbjct: 739 VDGCCRLNDVERAITIFGTNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFD 798

Query: 498 ----PNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDE 553
               PN VTYNIMI    K  N ++A +L+  MQNA   P  +TY+ ++      G   E
Sbjct: 799 RFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAE 858

Query: 554 AEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQA-----GLRPNVPTC 608
              VF E       PD  +Y ++++ + K G   KA    + M        G + ++ TC
Sbjct: 859 MFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTC 918

Query: 609 NSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
            +LLS F +VG++  A  +++ M+ L   P   T   L++
Sbjct: 919 RALLSGFAKVGEMEVAEKVMENMVRLQYIPDSATVIELIN 958



 Score =  135 bits (341), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 95/336 (28%), Positives = 154/336 (45%), Gaps = 42/336 (12%)

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
           + G K +  TY   +     A +F + +K + +M   G  PN V    LI+ Y +   + 
Sbjct: 515 ENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKEKVI 574

Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
           EA   ++ M   G   D  TY  L++   K   +D A +++++M+  G++PD F+Y V+I
Sbjct: 575 EACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLI 634

Query: 473 NCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFE 532
           N   K G++Q A  +F EMV +G  PN++ YN+++    ++   + A +L  +M   G  
Sbjct: 635 NGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLH 694

Query: 533 PDKVTYSIVMEVLGHC--GYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKA- 589
           P+ VTY  +++  G+C  G L EA  +F EM+ K  VPD  VY  LVD   +  +V +A 
Sbjct: 695 PNAVTYCTIID--GYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAI 752

Query: 590 ----------------------W-----------EWYEAMLQAGL----RPNVPTCNSLL 612
                                 W           E    ++        +PN  T N ++
Sbjct: 753 TIFGTNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMI 812

Query: 613 SAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
               + G L  A  L   M N  L P++ TYT LL+
Sbjct: 813 DYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLN 848



 Score =  132 bits (333), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 93/374 (24%), Positives = 174/374 (46%), Gaps = 7/374 (1%)

Query: 280 IPAGLAPFSRHFASTGNVVESVSRILRQWKWGPLAEEALGNTNYSMDAYQANQVLKQLQD 339
           I +GL P ++ +AS   ++E   R  +  + G      +   N  +  Y    V+K +  
Sbjct: 374 IASGLIPQAQAYAS---LIEGYCR-EKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCS 429

Query: 340 HTVALGFFNWLRRQ--AGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVT 397
                G +N ++    +G + +   YTT++    +  +FG   ++L +M   G  P++  
Sbjct: 430 SGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFC 489

Query: 398 YNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQ 457
           YN LI    +A  ++EA     +M   G +P+  TY   I  + +A     A    K+M+
Sbjct: 490 YNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMR 549

Query: 458 AAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQ 517
             G+ P+    + +IN   K   +  A   +  MV+QG + +  TY +++    K     
Sbjct: 550 ECGVLPNKVLCTGLINEYCKKEKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVD 609

Query: 518 SALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLV 577
            A +++R+M+  G  PD  +Y +++      G + +A ++F EM  +   P+  +Y +L+
Sbjct: 610 DAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLL 669

Query: 578 DLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLK 637
             + ++G + KA E  + M   GL PN  T  +++  + + G L++A+ L   M   GL 
Sbjct: 670 GGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLV 729

Query: 638 PSLQTYTLLLS-CC 650
           P    YT L+  CC
Sbjct: 730 PDSFVYTTLVDGCC 743



 Score =  113 bits (282), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 88/413 (21%), Positives = 176/413 (42%), Gaps = 4/413 (0%)

Query: 334 LKQLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQP 393
           +K+L+D    L   + L    G   D HTY+ ++  L + R   A   L+ +MV  G   
Sbjct: 290 IKRLEDAKSLLVEMDSL----GVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMVSHGINI 345

Query: 394 NVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMY 453
               Y+  I    +   + +A  +F  M   G  P    Y +LI+ + +   +    ++ 
Sbjct: 346 KPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELL 405

Query: 454 KKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKA 513
            +M+   +    +TY  ++  +  +G L  A+ +  EM+  GC PN+V Y  +I    + 
Sbjct: 406 VEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQN 465

Query: 514 RNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVY 573
             +  A+++ ++M+  G  PD   Y+ ++  L     +DEA +   EM      P+   Y
Sbjct: 466 SRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTY 525

Query: 574 GLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLN 633
           G  +  + +A     A ++ + M + G+ PN   C  L++ + +  ++ +A    + M++
Sbjct: 526 GAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKEKVIEACSAYRSMVD 585

Query: 634 LGLKPSLQTYTLLLSCCTEARSPYDMGFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDH 693
            G+    +TYT+L++   +     D       M   G    +F   +   G         
Sbjct: 586 QGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQK 645

Query: 694 VGSFLEMMHSEDRESKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAV 746
             S  + M  E       + + ++    +SG  E+A  + +  + K ++P+AV
Sbjct: 646 ASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAV 698



 Score = 94.7 bits (234), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 71/273 (26%), Positives = 118/273 (43%)

Query: 381 KLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIH 440
           KL + M+  G  P   TY+ LI    +   L +A  +  +M  +G   D  TY  LID  
Sbjct: 263 KLKESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGL 322

Query: 441 AKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNL 500
            K    D A  +  +M + G++   + Y   I  + K G ++ A  LF  M+  G IP  
Sbjct: 323 LKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQA 382

Query: 501 VTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAE 560
             Y  +I    + +N +   +L  +M+         TY  V++ +   G LD A  +  E
Sbjct: 383 QAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKE 442

Query: 561 MRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQ 620
           M      P+  +Y  L+  + +      A    + M + G+ P++   NSL+    +  +
Sbjct: 443 MIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKR 502

Query: 621 LSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEA 653
           + +A   L  M+  GLKP+  TY   +S   EA
Sbjct: 503 MDEARSFLVEMVENGLKPNAFTYGAFISGYIEA 535



 Score = 88.2 bits (217), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 70/268 (26%), Positives = 120/268 (44%), Gaps = 21/268 (7%)

Query: 401 LIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFL-------------- 446
           L+ +  R N L+   DV+K M       D  TY  LI  H +AG +              
Sbjct: 192 LLDALLRWNRLDLFWDVYKGMVERNVVFDVKTYHMLIIAHCRAGNVQLGKDVLFKTEKEF 251

Query: 447 -------DVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPN 499
                  D A+ + + M   GL P  +TY V+I+ L K   L+ A  L  EM + G   +
Sbjct: 252 RTATLNVDGALKLKESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLD 311

Query: 500 LVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFA 559
             TY+++I    K RN  +A  L  +M + G       Y   + V+   G +++A+A+F 
Sbjct: 312 NHTYSLLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFD 371

Query: 560 EMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVG 619
            M     +P    Y  L++ + +  NVR+ +E    M +  +  +  T  +++      G
Sbjct: 372 GMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSG 431

Query: 620 QLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
            L  AY++++ M+  G +P++  YT L+
Sbjct: 432 DLDGAYNIVKEMIASGCRPNVVIYTTLI 459


>gi|255539805|ref|XP_002510967.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223550082|gb|EEF51569.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 774

 Score =  157 bits (398), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 91/291 (31%), Positives = 151/291 (51%)

Query: 358 HDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDV 417
           +D H    + G +   R   A   L D+M+++GC+P+V T+N LIH   +   +  A+D+
Sbjct: 343 NDVHFTILINGYVKSGRLDEANAFLYDKMIKNGCRPDVFTFNTLIHGLCKKGLMGSAVDM 402

Query: 418 FKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGK 477
              M   GC P+ +TY TL+D   K   L+ A  +  +M A G   +   Y+V++  L K
Sbjct: 403 VNDMSANGCTPNLITYTTLLDGFCKKNQLEEAGYVLNEMSAKGFELNIMGYNVLLRALCK 462

Query: 478 AGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVT 537
            G +  A  +  EM ++GC P++ T+N +I    K    + AL LYRDM   G   + VT
Sbjct: 463 NGKVPKALDMLGEMSDKGCKPDIFTFNTLIFGLCKVDRKEDALALYRDMLLDGVIANTVT 522

Query: 538 YSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAML 597
           Y+ ++      G + EA  +  +M  +    DE  Y  L+  + K G   KA   ++ M+
Sbjct: 523 YNTLIHAFLRGGAIQEALKLVNDMLFRGCPLDEITYNGLIKAFCKLGATEKALGLFDEMV 582

Query: 598 QAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
           +  L P+  +CN L++   RVG++ +A  LL+ M++ GL P + TY  L++
Sbjct: 583 RKDLVPSNISCNLLINGLCRVGKVCNALELLRDMIHRGLAPDVVTYNSLIN 633



 Score =  151 bits (382), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 94/301 (31%), Positives = 153/301 (50%), Gaps = 2/301 (0%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           G + D  T+ T++  L +    G+   +++ M  +GC PN++TY  L+  + + N L EA
Sbjct: 375 GCRPDVFTFNTLIHGLCKKGLMGSAVDMVNDMSANGCTPNLITYTTLLDGFCKKNQLEEA 434

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
             V  +M   G E + + Y  L+    K G +  A+DM  +M   G  PD FT++ +I  
Sbjct: 435 GYVLNEMSAKGFELNIMGYNVLLRALCKNGKVPKALDMLGEMSDKGCKPDIFTFNTLIFG 494

Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPD 534
           L K    + A  L+ +M+  G I N VTYN +I    +    Q ALKL  DM   G   D
Sbjct: 495 LCKVDRKEDALALYRDMLLDGVIANTVTYNTLIHAFLRGGAIQEALKLVNDMLFRGCPLD 554

Query: 535 KVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYE 594
           ++TY+ +++     G  ++A  +F EM RK+ VP      LL++   + G V  A E   
Sbjct: 555 EITYNGLIKAFCKLGATEKALGLFDEMVRKDLVPSNISCNLLINGLCRVGKVCNALELLR 614

Query: 595 AMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEAR 654
            M+  GL P+V T NSL++   ++G + +A++L   +   G++P   TY  L+  C   R
Sbjct: 615 DMIHRGLAPDVVTYNSLINGLCKMGNIREAFNLFNKLQAEGIQPDAITYNTLI--CWHCR 672

Query: 655 S 655
           +
Sbjct: 673 A 673



 Score =  135 bits (341), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 99/385 (25%), Positives = 174/385 (45%), Gaps = 41/385 (10%)

Query: 328 YQANQVLKQLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMV 387
           +Q  ++L    D + ++  F W   Q G+ H    Y  ++  LG A++F  I+KLL Q+ 
Sbjct: 70  FQLCKLLLLPLDVSTSMAIFQWAGSQKGYCHTFDVYHVLIDKLGAAKEFKVIDKLLLQIK 129

Query: 388 RDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQ-VVGCEPDRVTYCTLIDIHAKAGFL 446
            +G       +  ++  YGRAN   +A  +   M+ V  CEP   +Y  ++DI   A   
Sbjct: 130 EEGIAFRESLFICIMKYYGRANLPGQATRMLLDMKGVYCCEPTFKSYNVVLDILVSANCP 189

Query: 447 DVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIM 506
            VA +++ +M + G+ P  +T+ V++  L     +  A  L  +M   GC+PN V Y  +
Sbjct: 190 SVAANVFYEMLSKGVIPTVYTFGVVMKALCMVNEVDNACSLLRDMTKHGCVPNSVVYQTL 249

Query: 507 IALQAKARNYQSALKLYRDM--------------------------QNA---------GF 531
           I   +K      ALKL  +M                          + A         GF
Sbjct: 250 IHALSKRDRVNEALKLLEEMFLMGCLPDVDTFNDVIYGLCRLNRIHEGAKLVDRMLFRGF 309

Query: 532 EPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWE 591
            P+ +TY ++M  L   G +DEA+ +      K   P++  + +L++ + K+G + +A  
Sbjct: 310 TPNDITYGVLMNGLCRVGKVDEAQVLL----NKVPTPNDVHFTILINGYVKSGRLDEANA 365

Query: 592 W-YEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCC 650
           + Y+ M++ G RP+V T N+L+    + G +  A  ++  M   G  P+L TYT LL   
Sbjct: 366 FLYDKMIKNGCRPDVFTFNTLIHGLCKKGLMGSAVDMVNDMSANGCTPNLITYTTLLDGF 425

Query: 651 TEARSPYDMGFCHELMAVSGHPAHM 675
            +     + G+    M+  G   ++
Sbjct: 426 CKKNQLEEAGYVLNEMSAKGFELNI 450



 Score =  126 bits (317), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 79/287 (27%), Positives = 145/287 (50%)

Query: 362 TYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQM 421
           TYTT++    +  Q      +L++M   G + N++ YN L+ +  +   + +ALD+  +M
Sbjct: 417 TYTTLLDGFCKKNQLEEAGYVLNEMSAKGFELNIMGYNVLLRALCKNGKVPKALDMLGEM 476

Query: 422 QVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHL 481
              GC+PD  T+ TLI    K    + A+ +Y+ M   G+  +T TY+ +I+   + G +
Sbjct: 477 SDKGCKPDIFTFNTLIFGLCKVDRKEDALALYRDMLLDGVIANTVTYNTLIHAFLRGGAI 536

Query: 482 QAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIV 541
           Q A +L  +M+ +GC  + +TYN +I    K    + AL L+ +M      P  ++ +++
Sbjct: 537 QEALKLVNDMLFRGCPLDEITYNGLIKAFCKLGATEKALGLFDEMVRKDLVPSNISCNLL 596

Query: 542 MEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGL 601
           +  L   G +  A  +  +M  +   PD   Y  L++   K GN+R+A+  +  +   G+
Sbjct: 597 INGLCRVGKVCNALELLRDMIHRGLAPDVVTYNSLINGLCKMGNIREAFNLFNKLQAEGI 656

Query: 602 RPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
           +P+  T N+L+    R G   DAY LL   +     P+  T+ +L+S
Sbjct: 657 QPDAITYNTLICWHCRAGMFDDAYLLLLRGVENAFIPNDVTWYILVS 703



 Score =  107 bits (266), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 72/263 (27%), Positives = 127/263 (48%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           GF+ +   Y  ++  L +  +      +L +M   GC+P++ T+N LI    + +   +A
Sbjct: 445 GFELNIMGYNVLLRALCKNGKVPKALDMLGEMSDKGCKPDIFTFNTLIFGLCKVDRKEDA 504

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
           L +++ M + G   + VTY TLI    + G +  A+ +   M   G   D  TY+ +I  
Sbjct: 505 LALYRDMLLDGVIANTVTYNTLIHAFLRGGAIQEALKLVNDMLFRGCPLDEITYNGLIKA 564

Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPD 534
             K G  + A  LF EMV +  +P+ ++ N++I    +     +AL+L RDM + G  PD
Sbjct: 565 FCKLGATEKALGLFDEMVRKDLVPSNISCNLLINGLCRVGKVCNALELLRDMIHRGLAPD 624

Query: 535 KVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYE 594
            VTY+ ++  L   G + EA  +F +++ +   PD   Y  L+    +AG    A+    
Sbjct: 625 VVTYNSLINGLCKMGNIREAFNLFNKLQAEGIQPDAITYNTLICWHCRAGMFDDAYLLLL 684

Query: 595 AMLQAGLRPNVPTCNSLLSAFLR 617
             ++    PN  T   L+S F++
Sbjct: 685 RGVENAFIPNDVTWYILVSNFIK 707


>gi|413915825|gb|AFW21589.1| hypothetical protein ZEAMMB73_481763 [Zea mays]
 gi|413923991|gb|AFW63923.1| hypothetical protein ZEAMMB73_685382 [Zea mays]
          Length = 953

 Score =  157 bits (398), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 92/309 (29%), Positives = 154/309 (49%)

Query: 362 TYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQM 421
           TYT +V    RA       ++L QM      PNVVT++ +++   +   + +A    ++M
Sbjct: 401 TYTVLVDAHCRAGNIDGAEQMLLQMEEKSVSPNVVTFSSILNGLVKRGCIAKAAGYMRKM 460

Query: 422 QVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHL 481
           +  G  P+ VTY TLID   K    + A+D+Y+ M   G+  + F    ++N L K G++
Sbjct: 461 KDSGIAPNVVTYGTLIDGFFKCQGQEAALDVYRDMLHEGVEANNFIVDSLVNGLRKNGNI 520

Query: 482 QAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIV 541
           + A  LF +M  +G + + V Y  ++    K  N  +ALK+ +++      PD V Y++ 
Sbjct: 521 EEAEALFKDMGERGLLLDHVNYATLMDGLFKTGNMPAALKVGQELMERNLSPDAVVYNVF 580

Query: 542 MEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGL 601
           +  L   G   EA++   EMR     PD+  Y  ++    + GN  KA +    M  + +
Sbjct: 581 INCLCRLGKFSEAKSFLKEMRNTGLEPDQATYNTMISAQCREGNTSKALKLLNEMKWSSI 640

Query: 602 RPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGF 661
           +PN+ T  +L+   L  G +  A +LL  M + G  P+  TY  +L  C+ +RSPY +  
Sbjct: 641 KPNLITYTTLVVGLLEAGVVEKAKYLLNEMASAGFTPTPLTYRRVLQACSGSRSPYVILE 700

Query: 662 CHELMAVSG 670
            HELM  +G
Sbjct: 701 VHELMMGAG 709



 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 92/314 (29%), Positives = 156/314 (49%), Gaps = 1/314 (0%)

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
           + G   +  TY T +  L + ++      LL +MV  G   ++V Y  ++   G+   + 
Sbjct: 322 KIGVAPNHVTYCTFIDSLAKVQRVNESLGLLGEMVSRGVAMDLVMYTTVMDRLGKEGKIE 381

Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
           EA DV +        P+ VTY  L+D H +AG +D A  M  +M+   +SP+  T+S I+
Sbjct: 382 EAKDVLRHALSDNITPNCVTYTVLVDAHCRAGNIDGAEQMLLQMEEKSVSPNVVTFSSIL 441

Query: 473 NCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFE 532
           N L K G +  A     +M + G  PN+VTY  +I    K +  ++AL +YRDM + G E
Sbjct: 442 NGLVKRGCIAKAAGYMRKMKDSGIAPNVVTYGTLIDGFFKCQGQEAALDVYRDMLHEGVE 501

Query: 533 PDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEW 592
            +      ++  L   G ++EAEA+F +M  +  + D   Y  L+D   K GN+  A + 
Sbjct: 502 ANNFIVDSLVNGLRKNGNIEEAEALFKDMGERGLLLDHVNYATLMDGLFKTGNMPAALKV 561

Query: 593 YEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSC-CT 651
            + +++  L P+    N  ++   R+G+ S+A   L+ M N GL+P   TY  ++S  C 
Sbjct: 562 GQELMERNLSPDAVVYNVFINCLCRLGKFSEAKSFLKEMRNTGLEPDQATYNTMISAQCR 621

Query: 652 EARSPYDMGFCHEL 665
           E  +   +   +E+
Sbjct: 622 EGNTSKALKLLNEM 635



 Score =  139 bits (350), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 108/385 (28%), Positives = 186/385 (48%), Gaps = 20/385 (5%)

Query: 372 RARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRV 431
           + +   A   ++++M   G   +VV YN L+  +  +   + A +V ++M+  G EP  V
Sbjct: 201 KVQDMAAALAVVERMTTQGLSLDVVGYNTLVAGFFYSGDADAAWEVAERMKADGVEPSVV 260

Query: 432 TYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEM 491
           T+ TLI  + K   ++ A  +Y+ M  +G+ PD  T S +++ L + G    A+ LF EM
Sbjct: 261 THTTLIGEYCKMKRIEEAFTLYEGMVRSGVLPDVVTLSALVDGLCRDGRFSEAYALFREM 320

Query: 492 VNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYL 551
              G  PN VTY   I   AK +    +L L  +M + G   D V Y+ VM+ LG  G +
Sbjct: 321 DKIGVAPNHVTYCTFIDSLAKVQRVNESLGLLGEMVSRGVAMDLVMYTTVMDRLGKEGKI 380

Query: 552 DEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSL 611
           +EA+ V       N  P+   Y +LVD   +AGN+  A +    M +  + PNV T +S+
Sbjct: 381 EEAKDVLRHALSDNITPNCVTYTVLVDAHCRAGNIDGAEQMLLQMEEKSVSPNVVTFSSI 440

Query: 612 LSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSC---CTEARSPYDMGFCHELMAV 668
           L+  ++ G ++ A   ++ M + G+ P++ TY  L+     C    +  D+   +  M  
Sbjct: 441 LNGLVKRGCIAKAAGYMRKMKDSGIAPNVVTYGTLIDGFFKCQGQEAALDV---YRDMLH 497

Query: 669 SGHPAHMFLL-SMPSPGPDGQNVRDHVGSFLEMMHSEDRESKRGLV------DAVVDFLH 721
            G  A+ F++ S+ +      N+ +    F +M        +RGL+        ++D L 
Sbjct: 498 EGVEANNFIVDSLVNGLRKNGNIEEAEALFKDM-------GERGLLLDHVNYATLMDGLF 550

Query: 722 KSGLKEEAGSVWEVAAQKNVYPDAV 746
           K+G    A  V +   ++N+ PDAV
Sbjct: 551 KTGNMPAALKVGQELMERNLSPDAV 575



 Score =  135 bits (341), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 93/340 (27%), Positives = 161/340 (47%), Gaps = 9/340 (2%)

Query: 295 GNVVESVSRILRQWKWGPLAEEALGNTNYSMDAYQANQVLKQLQDHTVALGFFNWLRRQA 354
           GN  +++ ++L + KW  +    +  T   +   +A  V K       A    N +   A
Sbjct: 623 GNTSKAL-KLLNEMKWSSIKPNLITYTTLVVGLLEAGVVEK-------AKYLLNEMA-SA 673

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           GF     TY  ++     +R    I ++ + M+  G   ++  YN L+H         +A
Sbjct: 674 GFTPTPLTYRRVLQACSGSRSPYVILEVHELMMGAGLHADITVYNTLVHVLCCHGMTRKA 733

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
             V  +M   G  PD +T+  LI  H K+  LD A   Y +M   GLSP+  T++ ++  
Sbjct: 734 TIVLDEMLGRGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQGLSPNIATFNTLLGG 793

Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPD 534
           L  AG +  A  + CEM   G  PN +TY+I++   AK  N   AL+LY +M + GF P 
Sbjct: 794 LESAGRIGEADTVICEMKKMGLEPNNLTYDILVTGYAKKSNKVEALRLYCEMVSKGFIPK 853

Query: 535 KVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYE 594
             TY+ ++      G +++A+ +F+EM+R+  +     Y +L++ W K  N  +     +
Sbjct: 854 ASTYNSLISDFAKAGMMNQAKELFSEMKRRGVLHTSSTYDILLNGWSKLRNGTEVRILLK 913

Query: 595 AMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNL 634
            M + G +P+  T +S+  AF + G   +A  LL+ +  +
Sbjct: 914 DMKELGFKPSKGTISSMSRAFSKPGMTWEARRLLKTLFKV 953



 Score =  132 bits (332), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 92/343 (26%), Positives = 160/343 (46%), Gaps = 4/343 (1%)

Query: 316 EALGNTNYSMDAYQAN---QVLKQLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGR 372
           + L   N S DA   N     L +L   + A  F   +R   G + D+ TY TM+    R
Sbjct: 563 QELMERNLSPDAVVYNVFINCLCRLGKFSEAKSFLKEMR-NTGLEPDQATYNTMISAQCR 621

Query: 373 ARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVT 432
                   KLL++M     +PN++TY  L+     A  + +A  +  +M   G  P  +T
Sbjct: 622 EGNTSKALKLLNEMKWSSIKPNLITYTTLVVGLLEAGVVEKAKYLLNEMASAGFTPTPLT 681

Query: 433 YCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMV 492
           Y  ++   + +    V +++++ M  AGL  D   Y+ +++ L   G  + A  +  EM+
Sbjct: 682 YRRVLQACSGSRSPYVILEVHELMMGAGLHADITVYNTLVHVLCCHGMTRKATIVLDEML 741

Query: 493 NQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLD 552
            +G  P+ +T+N +I    K+ +  +A   Y  M + G  P+  T++ ++  L   G + 
Sbjct: 742 GRGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQGLSPNIATFNTLLGGLESAGRIG 801

Query: 553 EAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLL 612
           EA+ V  EM++    P+   Y +LV  + K  N  +A   Y  M+  G  P   T NSL+
Sbjct: 802 EADTVICEMKKMGLEPNNLTYDILVTGYAKKSNKVEALRLYCEMVSKGFIPKASTYNSLI 861

Query: 613 SAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARS 655
           S F + G ++ A  L   M   G+  +  TY +LL+  ++ R+
Sbjct: 862 SDFAKAGMMNQAKELFSEMKRRGVLHTSSTYDILLNGWSKLRN 904



 Score =  131 bits (329), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 81/296 (27%), Positives = 144/296 (48%)

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
           + G   D   Y T++  L +     A  K+  +++     P+ V YN  I+   R    +
Sbjct: 532 ERGLLLDHVNYATLMDGLFKTGNMPAALKVGQELMERNLSPDAVVYNVFINCLCRLGKFS 591

Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
           EA    K+M+  G EPD+ TY T+I    + G    A+ +  +M+ + + P+  TY+ ++
Sbjct: 592 EAKSFLKEMRNTGLEPDQATYNTMISAQCREGNTSKALKLLNEMKWSSIKPNLITYTTLV 651

Query: 473 NCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFE 532
             L +AG ++ A  L  EM + G  P  +TY  ++   + +R+    L+++  M  AG  
Sbjct: 652 VGLLEAGVVEKAKYLLNEMASAGFTPTPLTYRRVLQACSGSRSPYVILEVHELMMGAGLH 711

Query: 533 PDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEW 592
            D   Y+ ++ VL   G   +A  V  EM  +   PD   +  L+    K+ ++  A+  
Sbjct: 712 ADITVYNTLVHVLCCHGMTRKATIVLDEMLGRGIAPDTITFNALILGHCKSSHLDNAFAT 771

Query: 593 YEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
           Y  ML  GL PN+ T N+LL      G++ +A  ++  M  +GL+P+  TY +L++
Sbjct: 772 YAQMLHQGLSPNIATFNTLLGGLESAGRIGEADTVICEMKKMGLEPNNLTYDILVT 827



 Score =  124 bits (311), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 91/332 (27%), Positives = 147/332 (44%), Gaps = 37/332 (11%)

Query: 352 RQAGFKHDEHTYTTMV-GILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANY 410
           + +G   +  TY T++ G      Q  A++   D M+ +G + N    + L++   +   
Sbjct: 461 KDSGIAPNVVTYGTLIDGFFKCQGQEAALDVYRD-MLHEGVEANNFIVDSLVNGLRKNGN 519

Query: 411 LNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSV 470
           + EA  +FK M   G   D V Y TL+D   K G +  A+ + +++    LSPD   Y+V
Sbjct: 520 IEEAEALFKDMGERGLLLDHVNYATLMDGLFKTGNMPAALKVGQELMERNLSPDAVVYNV 579

Query: 471 IINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAG 530
            INCL + G    A     EM N G  P+  TYN MI+ Q +  N   ALKL  +M+ + 
Sbjct: 580 FINCLCRLGKFSEAKSFLKEMRNTGLEPDQATYNTMISAQCREGNTSKALKLLNEMKWSS 639

Query: 531 FEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVP---------------------- 568
            +P+ +TY+ ++  L   G +++A+ +  EM    + P                      
Sbjct: 640 IKPNLITYTTLVVGLLEAGVVEKAKYLLNEMASAGFTPTPLTYRRVLQACSGSRSPYVIL 699

Query: 569 -------------DEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAF 615
                        D  VY  LV +    G  RKA    + ML  G+ P+  T N+L+   
Sbjct: 700 EVHELMMGAGLHADITVYNTLVHVLCCHGMTRKATIVLDEMLGRGIAPDTITFNALILGH 759

Query: 616 LRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
            +   L +A+     ML+ GL P++ T+  LL
Sbjct: 760 CKSSHLDNAFATYAQMLHQGLSPNIATFNTLL 791



 Score =  120 bits (301), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 79/302 (26%), Positives = 143/302 (47%), Gaps = 1/302 (0%)

Query: 336 QLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNV 395
           ++QD   AL     +  Q G   D   Y T+V     +    A  ++ ++M  DG +P+V
Sbjct: 201 KVQDMAAALAVVERMTTQ-GLSLDVVGYNTLVAGFFYSGDADAAWEVAERMKADGVEPSV 259

Query: 396 VTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKK 455
           VT+  LI  Y +   + EA  +++ M   G  PD VT   L+D   + G    A  ++++
Sbjct: 260 VTHTTLIGEYCKMKRIEEAFTLYEGMVRSGVLPDVVTLSALVDGLCRDGRFSEAYALFRE 319

Query: 456 MQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARN 515
           M   G++P+  TY   I+ L K   +  +  L  EMV++G   +LV Y  ++    K   
Sbjct: 320 MDKIGVAPNHVTYCTFIDSLAKVQRVNESLGLLGEMVSRGVAMDLVMYTTVMDRLGKEGK 379

Query: 516 YQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGL 575
            + A  + R   +    P+ VTY+++++     G +D AE +  +M  K+  P+   +  
Sbjct: 380 IEEAKDVLRHALSDNITPNCVTYTVLVDAHCRAGNIDGAEQMLLQMEEKSVSPNVVTFSS 439

Query: 576 LVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLG 635
           +++   K G + KA  +   M  +G+ PNV T  +L+  F +      A  + + ML+ G
Sbjct: 440 ILNGLVKRGCIAKAAGYMRKMKDSGIAPNVVTYGTLIDGFFKCQGQEAALDVYRDMLHEG 499

Query: 636 LK 637
           ++
Sbjct: 500 VE 501



 Score =  120 bits (300), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 102/406 (25%), Positives = 180/406 (44%), Gaps = 26/406 (6%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVR----DGCQPNVVTYNRLIHSYGRANY 410
           G   D  T +T +  L R    G    L + +VR    DG    VV +N LI  Y +   
Sbjct: 147 GVPWDGVTMSTALVGLSRTGLVGEAAALAEMLVRGRGIDGL--GVVGWNALIDGYCKVQD 204

Query: 411 LNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSV 470
           +  AL V ++M   G   D V Y TL+     +G  D A ++ ++M+A G+ P   T++ 
Sbjct: 205 MAAALAVVERMTTQGLSLDVVGYNTLVAGFFYSGDADAAWEVAERMKADGVEPSVVTHTT 264

Query: 471 IINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAG 530
           +I    K   ++ A  L+  MV  G +P++VT + ++    +   +  A  L+R+M   G
Sbjct: 265 LIGEYCKMKRIEEAFTLYEGMVRSGVLPDVVTLSALVDGLCRDGRFSEAYALFREMDKIG 324

Query: 531 FEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAW 590
             P+ VTY   ++ L     ++E+  +  EM  +    D  +Y  ++D  GK G + +A 
Sbjct: 325 VAPNHVTYCTFIDSLAKVQRVNESLGLLGEMVSRGVAMDLVMYTTVMDRLGKEGKIEEAK 384

Query: 591 EWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS-- 648
           +     L   + PN  T   L+ A  R G +  A  +L  M    + P++ T++ +L+  
Sbjct: 385 DVLRHALSDNITPNCVTYTVLVDAHCRAGNIDGAEQMLLQMEEKSVSPNVVTFSSILNGL 444

Query: 649 ----CCTEA----RSPYDMGFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEM 700
               C  +A    R   D G    ++         F           Q     +  + +M
Sbjct: 445 VKRGCIAKAAGYMRKMKDSGIAPNVVTYGTLIDGFF---------KCQGQEAALDVYRDM 495

Query: 701 MHSEDRESKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAV 746
           +H E  E+   +VD++V+ L K+G  EEA ++++   ++ +  D V
Sbjct: 496 LH-EGVEANNFIVDSLVNGLRKNGNIEEAEALFKDMGERGLLLDHV 540



 Score = 70.9 bits (172), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 72/295 (24%), Positives = 126/295 (42%), Gaps = 16/295 (5%)

Query: 461 LSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMI------ALQAKAR 514
           ++ DT +Y++ +  L + GH + A  +  EM  +G   + VT +  +       L  +A 
Sbjct: 113 VAADTVSYNIFLAGLSEQGHGRLAPPVLSEMCKRGVPWDGVTMSTALVGLSRTGLVGEAA 172

Query: 515 NYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAE--AVFAEMRRKNWVPDEPV 572
                L   R +   G     V ++ +++  G+C   D A   AV   M  +    D   
Sbjct: 173 ALAEMLVRGRGIDGLGV----VGWNALID--GYCKVQDMAAALAVVERMTTQGLSLDVVG 226

Query: 573 YGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGML 632
           Y  LV  +  +G+   AWE  E M   G+ P+V T  +L+  + ++ ++ +A+ L +GM+
Sbjct: 227 YNTLVAGFFYSGDADAAWEVAERMKADGVEPSVVTHTTLIGEYCKMKRIEEAFTLYEGMV 286

Query: 633 NLGLKPSLQTYTLLL-SCCTEARSPYDMGFCHELMAVSGHPAHMFLLSMPSPGPDGQNVR 691
             G+ P + T + L+   C + R         E+  +   P H+   +        Q V 
Sbjct: 287 RSGVLPDVVTLSALVDGLCRDGRFSEAYALFREMDKIGVAPNHVTYCTFIDSLAKVQRVN 346

Query: 692 DHVGSFLEMMHSEDRESKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAV 746
           + +G   EM+ S        +   V+D L K G  EEA  V   A   N+ P+ V
Sbjct: 347 ESLGLLGEMV-SRGVAMDLVMYTTVMDRLGKEGKIEEAKDVLRHALSDNITPNCV 400


>gi|359473390|ref|XP_002268680.2| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
           mitochondrial-like [Vitis vinifera]
          Length = 748

 Score =  157 bits (398), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 104/354 (29%), Positives = 179/354 (50%), Gaps = 4/354 (1%)

Query: 394 NVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMY 453
           N  +YN + HS  +   + EA  +  QM++ GC PD ++Y T+I+ + + G L   + + 
Sbjct: 252 NTASYNIITHSLCQLGRVVEAHQLLLQMELRGCIPDVISYSTVINGYCQVGELQRVLKLI 311

Query: 454 KKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKA 513
           ++MQ  GL P+ +TY+ +I  L K G +  A ++  EM+++G  P+ V Y  +I    K 
Sbjct: 312 EEMQIKGLKPNPYTYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTLIDGFCKL 371

Query: 514 RNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVY 573
            N  SA +L+ +MQ     PD +TY+ V+  L   G + EA+ +F EM  K   PDE  Y
Sbjct: 372 GNVSSAYRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPDEVTY 431

Query: 574 GLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLN 633
             L+D + K G +++A+  +  MLQ GL PN+ T  +L     + G++  A  LL  M  
Sbjct: 432 TALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHEMCR 491

Query: 634 LGLKPSLQTYTLLLSCCTEARSPYDMGFCHELMAVSG-HP-AHMFLLSMPSPGPDGQNVR 691
            GL+ ++ TY  L++   +A +        + M V+G HP A  +   M +     + VR
Sbjct: 492 KGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVR 551

Query: 692 DHVGSFLEMMHSEDRESKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDA 745
            H    L  M   + +      + +++    SG+ E+   + +   +K + P+A
Sbjct: 552 AH--ELLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNA 603



 Score =  149 bits (375), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 100/327 (30%), Positives = 163/327 (49%), Gaps = 14/327 (4%)

Query: 359 DEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVF 418
           D  +Y+T++    +  +   + KL+++M   G +PN  TYN +I    +   + EA  V 
Sbjct: 287 DVISYSTVINGYCQVGELQRVLKLIEEMQIKGLKPNPYTYNGVILLLCKTGKVAEAERVL 346

Query: 419 KQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKA 478
           ++M   G  PD V Y TLID   K G +  A  ++ +MQ   +SPD  TY+ +I  L + 
Sbjct: 347 REMISEGIAPDGVIYTTLIDGFCKLGNVSSAYRLFDEMQKRKISPDFITYTAVICGLCQT 406

Query: 479 GHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTY 538
           G +  A +LF EMV +   P+ VTY  +I    K    + A  L+  M   G  P+ VTY
Sbjct: 407 GRVMEADKLFHEMVCKRLEPDEVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTY 466

Query: 539 SIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQ 598
           + + + L  CG +D A  +  EM RK    +   Y  LV+   KAGN+ +A +  + M  
Sbjct: 467 TALADGLCKCGEVDTANELLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEV 526

Query: 599 AGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYD 658
           AG  P+  T  +L+ A+ +  ++  A+ LL+ ML+  L+P++ T+ +L++          
Sbjct: 527 AGFHPDAVTYTTLMDAYCKSREMVRAHELLRQMLDRELQPTVVTFNVLMN---------- 576

Query: 659 MGFCHELMAVSGHPAHMFLLS---MPS 682
            GFC   M   G     ++L    MP+
Sbjct: 577 -GFCMSGMLEDGEKLLKWMLEKGIMPN 602



 Score =  147 bits (372), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 90/316 (28%), Positives = 153/316 (48%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           G   D   YTT++    +     +  +L D+M +    P+ +TY  +I    +   + EA
Sbjct: 353 GIAPDGVIYTTLIDGFCKLGNVSSAYRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEA 412

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
             +F +M     EPD VTY  LID + K G +  A  ++ +M   GL+P+  TY+ + + 
Sbjct: 413 DKLFHEMVCKRLEPDEVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADG 472

Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPD 534
           L K G +  A++L  EM  +G   N+ TYN ++    KA N   A+KL +DM+ AGF PD
Sbjct: 473 LCKCGEVDTANELLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPD 532

Query: 535 KVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYE 594
            VTY+ +M+       +  A  +  +M  +   P    + +L++ +  +G +    +  +
Sbjct: 533 AVTYTTLMDAYCKSREMVRAHELLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLK 592

Query: 595 AMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEAR 654
            ML+ G+ PN  T NSL+  +     +     + +GM   G+ P   TY +L+    +AR
Sbjct: 593 WMLEKGIMPNATTYNSLIKQYCIRNNMRATTEIYRGMCAKGVVPDGNTYNILIKGHCKAR 652

Query: 655 SPYDMGFCHELMAVSG 670
           +  +  F H  M   G
Sbjct: 653 NMKEAWFLHRDMVGKG 668



 Score =  141 bits (355), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 88/289 (30%), Positives = 152/289 (52%), Gaps = 7/289 (2%)

Query: 380 NKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDI 439
           ++LL QM   GC P+V++Y+ +I+ Y +   L   L + ++MQ+ G +P+  TY  +I +
Sbjct: 273 HQLLLQMELRGCIPDVISYSTVINGYCQVGELQRVLKLIEEMQIKGLKPNPYTYNGVILL 332

Query: 440 HAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPN 499
             K G +  A  + ++M + G++PD   Y+ +I+   K G++ +A++LF EM  +   P+
Sbjct: 333 LCKTGKVAEAERVLREMISEGIAPDGVIYTTLIDGFCKLGNVSSAYRLFDEMQKRKISPD 392

Query: 500 LVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHC--GYLDEAEAV 557
            +TY  +I    +      A KL+ +M     EPD+VTY+ +++  G+C  G + EA ++
Sbjct: 393 FITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPDEVTYTALID--GYCKEGKMKEAFSL 450

Query: 558 FAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLR 617
             +M +    P+   Y  L D   K G V  A E    M + GL  N+ T NSL++   +
Sbjct: 451 HNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHEMCRKGLELNIYTYNSLVNGLCK 510

Query: 618 VGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGFCHELM 666
            G +  A  L++ M   G  P   TYT L+    ++R   +M   HEL+
Sbjct: 511 AGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSR---EMVRAHELL 556



 Score =  135 bits (341), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 84/294 (28%), Positives = 143/294 (48%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           G K + +TY  ++ +L +  +     ++L +M+ +G  P+ V Y  LI  + +   ++ A
Sbjct: 318 GLKPNPYTYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTLIDGFCKLGNVSSA 377

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
             +F +MQ     PD +TY  +I    + G +  A  ++ +M    L PD  TY+ +I+ 
Sbjct: 378 YRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPDEVTYTALIDG 437

Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPD 534
             K G ++ A  L  +M+  G  PN+VTY  +     K     +A +L  +M   G E +
Sbjct: 438 YCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHEMCRKGLELN 497

Query: 535 KVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYE 594
             TY+ ++  L   G +D+A  +  +M    + PD   Y  L+D + K+  + +A E   
Sbjct: 498 IYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVRAHELLR 557

Query: 595 AMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
            ML   L+P V T N L++ F   G L D   LL+ ML  G+ P+  TY  L+ 
Sbjct: 558 QMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNATTYNSLIK 611



 Score =  132 bits (333), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 104/387 (26%), Positives = 181/387 (46%), Gaps = 17/387 (4%)

Query: 269 ERFSKPSREMKIPAGLAPFSRHF-------ASTGNVVESVSRILRQWKWGPLAEEALGNT 321
           +R  K   EM+I  GL P    +         TG V E+  R+LR+     +A + +  T
Sbjct: 305 QRVLKLIEEMQIK-GLKPNPYTYNGVILLLCKTGKVAEA-ERVLREMISEGIAPDGVIYT 362

Query: 322 NYSMDAYQANQVLKQLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINK 381
              +D +       +L + + A   F+ ++++     D  TYT ++  L +  +    +K
Sbjct: 363 TL-IDGFC------KLGNVSSAYRLFDEMQKRK-ISPDFITYTAVICGLCQTGRVMEADK 414

Query: 382 LLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHA 441
           L  +MV    +P+ VTY  LI  Y +   + EA  +  QM  +G  P+ VTY  L D   
Sbjct: 415 LFHEMVCKRLEPDEVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLC 474

Query: 442 KAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLV 501
           K G +D A ++  +M   GL  + +TY+ ++N L KAG++  A +L  +M   G  P+ V
Sbjct: 475 KCGEVDTANELLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAV 534

Query: 502 TYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEM 561
           TY  ++    K+R    A +L R M +   +P  VT++++M      G L++ E +   M
Sbjct: 535 TYTTLMDAYCKSREMVRAHELLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWM 594

Query: 562 RRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQL 621
             K  +P+   Y  L+  +    N+R   E Y  M   G+ P+  T N L+    +   +
Sbjct: 595 LEKGIMPNATTYNSLIKQYCIRNNMRATTEIYRGMCAKGVVPDGNTYNILIKGHCKARNM 654

Query: 622 SDAYHLLQGMLNLGLKPSLQTYTLLLS 648
            +A+ L + M+  G   ++ +Y  L+ 
Sbjct: 655 KEAWFLHRDMVGKGFNLTVSSYNALIK 681



 Score =  126 bits (317), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 80/294 (27%), Positives = 138/294 (46%), Gaps = 35/294 (11%)

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
           Q G   +  TYT +   L +  +    N+LL +M R G + N+ TYN L++   +A  ++
Sbjct: 456 QMGLTPNIVTYTALADGLCKCGEVDTANELLHEMCRKGLELNIYTYNSLVNGLCKAGNID 515

Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
           +A+ + K M+V G  PD VTY TL+D + K+  +  A ++ ++M    L P   T++V++
Sbjct: 516 QAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVRAHELLRQMLDRELQPTVVTFNVLM 575

Query: 473 NCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFE 532
           N    +G L+   +L   M+ +G +PN  TYN +I       N ++  ++YR M   G  
Sbjct: 576 NGFCMSGMLEDGEKLLKWMLEKGIMPNATTYNSLIKQYCIRNNMRATTEIYRGMCAKGVV 635

Query: 533 PDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEW 592
           PD  TY+I+++  GHC                                 KA N+++AW  
Sbjct: 636 PDGNTYNILIK--GHC---------------------------------KARNMKEAWFL 660

Query: 593 YEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLL 646
           +  M+  G    V + N+L+  F +  +  +A  L + M   GL    + Y + 
Sbjct: 661 HRDMVGKGFNLTVSSYNALIKGFYKRKKFLEARELFEQMRREGLVADREIYNIF 714



 Score =  117 bits (293), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 97/375 (25%), Positives = 170/375 (45%), Gaps = 8/375 (2%)

Query: 376 FGAINKLLDQMVRD-GCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYC 434
           FG   + L    +D G  P V  ++        A  L+EA  +F +M   G     V  C
Sbjct: 164 FGHFVEQLIYTYKDWGSDPRV--FDIFFQVLVEAGMLDEARKLFDKMLNYGLLIS-VDSC 220

Query: 435 TLIDIHAKAGF--LDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMV 492
            L   H       + +A+ ++ +    G+  +T +Y++I + L + G +  AHQL  +M 
Sbjct: 221 NLFISHLSEDLDGIKIALKVFVEFPEVGVCWNTASYNIITHSLCQLGRVVEAHQLLLQME 280

Query: 493 NQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLD 552
            +GCIP++++Y+ +I    +    Q  LKL  +MQ  G +P+  TY+ V+ +L   G + 
Sbjct: 281 LRGCIPDVISYSTVINGYCQVGELQRVLKLIEEMQIKGLKPNPYTYNGVILLLCKTGKVA 340

Query: 553 EAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLL 612
           EAE V  EM  +   PD  +Y  L+D + K GNV  A+  ++ M +  + P+  T  +++
Sbjct: 341 EAERVLREMISEGIAPDGVIYTTLIDGFCKLGNVSSAYRLFDEMQKRKISPDFITYTAVI 400

Query: 613 SAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS-CCTEARSPYDMGFCHELMAVSGH 671
               + G++ +A  L   M+   L+P   TYT L+   C E +        H  M   G 
Sbjct: 401 CGLCQTGRVMEADKLFHEMVCKRLEPDEVTYTALIDGYCKEGKMKEAFSL-HNQMLQMGL 459

Query: 672 PAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRESKRGLVDAVVDFLHKSGLKEEAGS 731
             ++   +  + G       D     L  M  +  E      +++V+ L K+G  ++A  
Sbjct: 460 TPNIVTYTALADGLCKCGEVDTANELLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVK 519

Query: 732 VWEVAAQKNVYPDAV 746
           + +       +PDAV
Sbjct: 520 LMKDMEVAGFHPDAV 534



 Score = 89.7 bits (221), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 56/191 (29%), Positives = 99/191 (51%)

Query: 354 AGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNE 413
           AGF  D  TYTT++    ++R+    ++LL QM+    QP VVT+N L++ +  +  L +
Sbjct: 527 AGFHPDAVTYTTLMDAYCKSREMVRAHELLRQMLDRELQPTVVTFNVLMNGFCMSGMLED 586

Query: 414 ALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIIN 473
              + K M   G  P+  TY +LI  +     +    ++Y+ M A G+ PD  TY+++I 
Sbjct: 587 GEKLLKWMLEKGIMPNATTYNSLIKQYCIRNNMRATTEIYRGMCAKGVVPDGNTYNILIK 646

Query: 474 CLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEP 533
              KA +++ A  L  +MV +G    + +YN +I    K + +  A +L+  M+  G   
Sbjct: 647 GHCKARNMKEAWFLHRDMVGKGFNLTVSSYNALIKGFYKRKKFLEARELFEQMRREGLVA 706

Query: 534 DKVTYSIVMEV 544
           D+  Y+I  ++
Sbjct: 707 DREIYNIFADI 717



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 59/239 (24%), Positives = 100/239 (41%), Gaps = 23/239 (9%)

Query: 291 FASTGNVVESVSRILRQWKWGPLAEEALGNTNYSMDAY-------QANQVLKQLQDHTVA 343
               GN+ ++V ++++  +      +A+  T   MDAY       +A+++L+Q+ D  + 
Sbjct: 508 LCKAGNIDQAV-KLMKDMEVAGFHPDAVTYTTL-MDAYCKSREMVRAHELLRQMLDRELQ 565

Query: 344 LGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIH 403
                +     GF         M G+L          KLL  M+  G  PN  TYN LI 
Sbjct: 566 PTVVTFNVLMNGF--------CMSGMLEDG------EKLLKWMLEKGIMPNATTYNSLIK 611

Query: 404 SYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSP 463
            Y   N +    ++++ M   G  PD  TY  LI  H KA  +  A  +++ M   G + 
Sbjct: 612 QYCIRNNMRATTEIYRGMCAKGVVPDGNTYNILIKGHCKARNMKEAWFLHRDMVGKGFNL 671

Query: 464 DTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKL 522
              +Y+ +I    K      A +LF +M  +G + +   YNI   +       +  L+L
Sbjct: 672 TVSSYNALIKGFYKRKKFLEARELFEQMRREGLVADREIYNIFADINYDEGKMELTLEL 730


>gi|115487378|ref|NP_001066176.1| Os12g0152600 [Oryza sativa Japonica Group]
 gi|77553036|gb|ABA95832.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
           sativa Japonica Group]
 gi|113648683|dbj|BAF29195.1| Os12g0152600 [Oryza sativa Japonica Group]
 gi|125535802|gb|EAY82290.1| hypothetical protein OsI_37500 [Oryza sativa Indica Group]
 gi|125578525|gb|EAZ19671.1| hypothetical protein OsJ_35247 [Oryza sativa Japonica Group]
          Length = 716

 Score =  157 bits (398), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 103/326 (31%), Positives = 156/326 (47%), Gaps = 5/326 (1%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           R  G   D  TY +++    +A        L   + R G  P+V+TYN L+  Y R   L
Sbjct: 364 RAMGLLPDLITYNSLINGYCKAGNLKEALWLFGDLKRAGLAPSVLTYNILLDGYCRLGDL 423

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
            EA    ++M   GC+PD  TY  L++   K   L +  + + +M + GL PD F Y+  
Sbjct: 424 EEARRFKQEMVEQGCQPDVSTYTILMNGSRKVRNLAMVREFFDEMLSKGLQPDCFAYNTR 483

Query: 472 INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF 531
           I+     G    A QL   M+++G   + VTYNI +    K+ N + A  L+  M + G 
Sbjct: 484 ISAELILGSTSEAFQLTEVMISRGISSDTVTYNIFLDGLCKSGNLKDAYVLWMKMVSDGL 543

Query: 532 EPDKVTYSIVMEVLGHC--GYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKA 589
           +PD +TY+ ++    HC  G L EA  +F  M      P    Y + +  + + GN+  A
Sbjct: 544 QPDCITYTCLIH--AHCERGRLREARDIFDGMLVSGLPPSAVTYTVFIHAYCRRGNLYSA 601

Query: 590 WEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSC 649
           + W++ ML+ G+RPN  T N L+ A  R+G+ + AY     ML  GL P+  TYTLL+  
Sbjct: 602 YGWFQKMLEEGVRPNEVTYNVLIHALCRMGRTNLAYQHFHEMLERGLSPNKYTYTLLIDG 661

Query: 650 -CTEARSPYDMGFCHELMAVSGHPAH 674
            C E      +    E+     HP H
Sbjct: 662 NCKEGNWEEAIRLYSEMHQHGIHPDH 687



 Score =  149 bits (375), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 84/263 (31%), Positives = 139/263 (52%)

Query: 385 QMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAG 444
           +M  +G  P VVTYN +IH   R+  +  A   F +M+ +G  PD +TY +LI+ + KAG
Sbjct: 327 EMENEGIVPTVVTYNTIIHGMFRSGNVEAARMKFVEMRAMGLLPDLITYNSLINGYCKAG 386

Query: 445 FLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYN 504
            L  A+ ++  ++ AGL+P   TY+++++   + G L+ A +   EMV QGC P++ TY 
Sbjct: 387 NLKEALWLFGDLKRAGLAPSVLTYNILLDGYCRLGDLEEARRFKQEMVEQGCQPDVSTYT 446

Query: 505 IMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRK 564
           I++    K RN     + + +M + G +PD   Y+  +      G   EA  +   M  +
Sbjct: 447 ILMNGSRKVRNLAMVREFFDEMLSKGLQPDCFAYNTRISAELILGSTSEAFQLTEVMISR 506

Query: 565 NWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDA 624
               D   Y + +D   K+GN++ A+  +  M+  GL+P+  T   L+ A    G+L +A
Sbjct: 507 GISSDTVTYNIFLDGLCKSGNLKDAYVLWMKMVSDGLQPDCITYTCLIHAHCERGRLREA 566

Query: 625 YHLLQGMLNLGLKPSLQTYTLLL 647
             +  GML  GL PS  TYT+ +
Sbjct: 567 RDIFDGMLVSGLPPSAVTYTVFI 589



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 120/465 (25%), Positives = 196/465 (42%), Gaps = 38/465 (8%)

Query: 385 QMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAG 444
           +M   G  P +   N ++ +       ++   V+ +M  +G EP  VTY TL+D   + G
Sbjct: 186 EMAHHGVPPFIKECNLVLRALRDEARWDDMRSVYAEMLQLGIEPSIVTYNTLLDSFFREG 245

Query: 445 FLDVAMDMYKKMQA--AGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVT 502
            +D A  + ++M+A   G  P   TY+V+IN L + G L+ A QL   M       +  T
Sbjct: 246 RVDQAAKLLREMEARPGGCLPSDVTYNVVINGLARKGELEKAAQLVDRM-RMSKKASAFT 304

Query: 503 YNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMR 562
           +N +I       + + A  L  +M+N G  P  VTY+ ++  +   G ++ A   F EMR
Sbjct: 305 FNPLITGYFARGSVEKAGALQLEMENEGIVPTVVTYNTIIHGMFRSGNVEAARMKFVEMR 364

Query: 563 RKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLS 622
               +PD   Y  L++ + KAGN+++A   +  + +AGL P+V T N LL  + R+G L 
Sbjct: 365 AMGLLPDLITYNSLINGYCKAGNLKEALWLFGDLKRAGLAPSVLTYNILLDGYCRLGDLE 424

Query: 623 DAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGFCHELMAVSGHPAHMFLLSMPS 682
           +A    Q M+  G +P + TYT+L++   + R+   +    + M   G     F  +   
Sbjct: 425 EARRFKQEMVEQGCQPDVSTYTILMNGSRKVRNLAMVREFFDEMLSKGLQPDCFAYNTRI 484

Query: 683 PGPDGQNVRDHVGSFLEMMHSEDRESKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVY 742
                           E+M S    S     +  +D L KSG  ++A  +W       + 
Sbjct: 485 SAELILGSTSEAFQLTEVMISRGISSDTVTYNIFLDGLCKSGNLKDAYVLWMKMVSDGLQ 544

Query: 743 PDAVKEKGMSYWLINLHV----------MSDGTAVIALSRT------------------- 773
           PD +        LI+ H           + DG  V  L  +                   
Sbjct: 545 PDCITYT----CLIHAHCERGRLREARDIFDGMLVSGLPPSAVTYTVFIHAYCRRGNLYS 600

Query: 774 -LAWFRKQMLISGVGPSRIDIVTGWGRRSRVTGTSLVRQAVQELL 817
              WF+K ML  GV P+ +          R+  T+L  Q   E+L
Sbjct: 601 AYGWFQK-MLEEGVRPNEVTYNVLIHALCRMGRTNLAYQHFHEML 644



 Score =  128 bits (322), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 87/319 (27%), Positives = 144/319 (45%), Gaps = 1/319 (0%)

Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLI 402
           AL  F  L+R AG      TY  ++    R        +   +MV  GCQP+V TY  L+
Sbjct: 391 ALWLFGDLKR-AGLAPSVLTYNILLDGYCRLGDLEEARRFKQEMVEQGCQPDVSTYTILM 449

Query: 403 HSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLS 462
           +   +   L    + F +M   G +PD   Y T I      G    A  + + M + G+S
Sbjct: 450 NGSRKVRNLAMVREFFDEMLSKGLQPDCFAYNTRISAELILGSTSEAFQLTEVMISRGIS 509

Query: 463 PDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKL 522
            DT TY++ ++ L K+G+L+ A+ L+ +MV+ G  P+ +TY  +I    +    + A  +
Sbjct: 510 SDTVTYNIFLDGLCKSGNLKDAYVLWMKMVSDGLQPDCITYTCLIHAHCERGRLREARDI 569

Query: 523 YRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGK 582
           +  M  +G  P  VTY++ +      G L  A   F +M  +   P+E  Y +L+    +
Sbjct: 570 FDGMLVSGLPPSAVTYTVFIHAYCRRGNLYSAYGWFQKMLEEGVRPNEVTYNVLIHALCR 629

Query: 583 AGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQT 642
            G    A++ +  ML+ GL PN  T   L+    + G   +A  L   M   G+ P   T
Sbjct: 630 MGRTNLAYQHFHEMLERGLSPNKYTYTLLIDGNCKEGNWEEAIRLYSEMHQHGIHPDHCT 689

Query: 643 YTLLLSCCTEARSPYDMGF 661
           +  L     E +S + + +
Sbjct: 690 HNALFKGFDEGQSKHAIQY 708



 Score =  128 bits (322), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 97/327 (29%), Positives = 154/327 (47%), Gaps = 13/327 (3%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           R  G    + TY  ++  L R  +     +L+D+M R   + +  T+N LI  Y     +
Sbjct: 260 RPGGCLPSDVTYNVVINGLARKGELEKAAQLVDRM-RMSKKASAFTFNPLITGYFARGSV 318

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
            +A  +  +M+  G  P  VTY T+I    ++G ++ A   + +M+A GL PD  TY+ +
Sbjct: 319 EKAGALQLEMENEGIVPTVVTYNTIIHGMFRSGNVEAARMKFVEMRAMGLLPDLITYNSL 378

Query: 472 INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF 531
           IN   KAG+L+ A  LF ++   G  P+++TYNI++    +  + + A +  ++M   G 
Sbjct: 379 INGYCKAGNLKEALWLFGDLKRAGLAPSVLTYNILLDGYCRLGDLEEARRFKQEMVEQGC 438

Query: 532 EPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWE 591
           +PD  TY+I+M        L      F EM  K   PD   Y   +      G+  +A++
Sbjct: 439 QPDVSTYTILMNGSRKVRNLAMVREFFDEMLSKGLQPDCFAYNTRISAELILGSTSEAFQ 498

Query: 592 WYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSC-- 649
             E M+  G+  +  T N  L    + G L DAY L   M++ GL+P   TYT L+    
Sbjct: 499 LTEVMISRGISSDTVTYNIFLDGLCKSGNLKDAYVLWMKMVSDGLQPDCITYTCLIHAHC 558

Query: 650 ----CTEARSPYDMGFCHELMAVSGHP 672
                 EAR  +D       M VSG P
Sbjct: 559 ERGRLREARDIFDG------MLVSGLP 579



 Score = 73.2 bits (178), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 57/236 (24%), Positives = 99/236 (41%), Gaps = 36/236 (15%)

Query: 448 VAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMI 507
           + +  +++M   G+ P     ++++  L           ++ EM+  G  P++VTYN ++
Sbjct: 179 LCLAAFREMAHHGVPPFIKECNLVLRALRDEARWDDMRSVYAEMLQLGIEPSIVTYNTLL 238

Query: 508 ALQAKARNYQSALKLYRDMQN--AGFEPDKVTYSIVMEVLGHCGYLDEAE---------- 555
               +      A KL R+M+    G  P  VTY++V+  L   G L++A           
Sbjct: 239 DSFFREGRVDQAAKLLREMEARPGGCLPSDVTYNVVINGLARKGELEKAAQLVDRMRMSK 298

Query: 556 ------------------------AVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWE 591
                                   A+  EM  +  VP    Y  ++    ++GNV  A  
Sbjct: 299 KASAFTFNPLITGYFARGSVEKAGALQLEMENEGIVPTVVTYNTIIHGMFRSGNVEAARM 358

Query: 592 WYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
            +  M   GL P++ T NSL++ + + G L +A  L   +   GL PS+ TY +LL
Sbjct: 359 KFVEMRAMGLLPDLITYNSLINGYCKAGNLKEALWLFGDLKRAGLAPSVLTYNILL 414



 Score = 42.4 bits (98), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 55/240 (22%), Positives = 98/240 (40%), Gaps = 30/240 (12%)

Query: 438 DIHAKA-GFLDVAMDMYKKMQAA--GLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQ 494
           D+HA   G   +A  +++  +A   G       Y+ ++  L +A HL AAH +    ++ 
Sbjct: 72  DVHAALRGLPGLARQLFRWAEATPRGFPRCASAYAAVLVPLAEAKHLHAAHPVSVRAIHL 131

Query: 495 G----------CIPNLVTYNIM--------IALQAKARNYQSA------LKLYRDMQNAG 530
           G            P  V+ + +             +ARN   +      L  +R+M + G
Sbjct: 132 GLLLPLVSLLLSFPTTVSLHYLLNLLLRLSTKFNTRARNPAPSTCSTLCLAAFREMAHHG 191

Query: 531 FEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAW 590
             P     ++V+  L      D+  +V+AEM +    P    Y  L+D + + G V +A 
Sbjct: 192 VPPFIKECNLVLRALRDEARWDDMRSVYAEMLQLGIEPSIVTYNTLLDSFFREGRVDQAA 251

Query: 591 EWYEAM--LQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
           +    M     G  P+  T N +++   R G+L  A  L+  M  +  K S  T+  L++
Sbjct: 252 KLLREMEARPGGCLPSDVTYNVVINGLARKGELEKAAQLVDRM-RMSKKASAFTFNPLIT 310


>gi|449532420|ref|XP_004173179.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g05670, mitochondrial-like [Cucumis sativus]
          Length = 748

 Score =  157 bits (398), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 91/313 (29%), Positives = 159/313 (50%)

Query: 359 DEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVF 418
           D   YTT++    +       NK  D+M+     P+ +TY  LI  +G+   + E  ++F
Sbjct: 362 DNVVYTTLIHGFFKLGHVRTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNLF 421

Query: 419 KQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKA 478
            +M   G +PD VTY TLID++ KAG +  A  ++ +M   G++P+  TY  +I+ L K 
Sbjct: 422 HEMISRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKH 481

Query: 479 GHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTY 538
           G L  A++L  EM  +G   N+  YN M+    KA N + A+KL ++M+ AG +PD +TY
Sbjct: 482 GELDTANELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITY 541

Query: 539 SIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQ 598
           + V++     G +D+A  +  EM  +   P    + +L++ +   G +         ML+
Sbjct: 542 TTVIDAYCRLGDIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLE 601

Query: 599 AGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYD 658
            G+ P+  T N+L+        ++    + + M N G+ P   TY +L+    +AR+  +
Sbjct: 602 KGIVPDAITYNTLMKQHCIRNSMNTTTKIYKRMRNQGVAPDSNTYNILIKGHCKARNLKE 661

Query: 659 MGFCHELMAVSGH 671
             F ++ M   G+
Sbjct: 662 AWFLYKEMIEKGY 674



 Score =  154 bits (388), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 95/304 (31%), Positives = 155/304 (50%), Gaps = 11/304 (3%)

Query: 359 DEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVF 418
           D  +Y+T++       +     KL+D M   G +PN  TYN +I    +     EA  V 
Sbjct: 292 DVVSYSTVIDGYCHLGELKKALKLMDDMQIKGLKPNRYTYNSIILLLCKIGKSFEAEKVL 351

Query: 419 KQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKA 478
           ++M      PD V Y TLI    K G +  A   + +M +  +SPD  TY+ +I   G+ 
Sbjct: 352 REMMSQKIIPDNVVYTTLIHGFFKLGHVRTANKWFDEMLSKKISPDYITYTTLIQGFGQG 411

Query: 479 GHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTY 538
           G +     LF EM+++G  P+ VTY  +I +  KA    +A  L+ +M   G  P+ VTY
Sbjct: 412 GKVIEPQNLFHEMISRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTY 471

Query: 539 SIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQ 598
             +++ L   G LD A  +  EMR+K    +  +Y  +V+   KAGN+ +A +  + M  
Sbjct: 472 GALIDGLCKHGELDTANELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEV 531

Query: 599 AGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYD 658
           AG+ P+  T  +++ A+ R+G +  A+ LLQ ML+ GL+P++ T+ +L++          
Sbjct: 532 AGIDPDAITYTTVIDAYCRLGDIDKAHKLLQEMLDRGLQPTVVTFNVLMN---------- 581

Query: 659 MGFC 662
            GFC
Sbjct: 582 -GFC 584



 Score =  153 bits (387), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 86/300 (28%), Positives = 156/300 (52%), Gaps = 4/300 (1%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           G K DE TYTT++ +  +A +      L ++MV+ G  PN+VTY  LI    +   L+ A
Sbjct: 428 GLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTA 487

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
            ++  +M+  G + +   Y ++++   KAG ++ A+ + K+M+ AG+ PD  TY+ +I+ 
Sbjct: 488 NELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDA 547

Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPD 534
             + G +  AH+L  EM+++G  P +VT+N+++         +   +L   M   G  PD
Sbjct: 548 YCRLGDIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGIVPD 607

Query: 535 KVTYSIVMEVLGHC--GYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEW 592
            +TY+ +M+   HC    ++    ++  MR +   PD   Y +L+    KA N+++AW  
Sbjct: 608 AITYNTLMK--QHCIRNSMNTTTKIYKRMRNQGVAPDSNTYNILIKGHCKARNLKEAWFL 665

Query: 593 YEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTE 652
           Y+ M++ G  P V + N+L+  F +  +  +A  L + M   GL    + Y   +  C E
Sbjct: 666 YKEMIEKGYVPTVTSYNALIKRFYKKRKFXEARELFEEMRGHGLVADGEIYNFFVDMCYE 725



 Score =  145 bits (365), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 87/294 (29%), Positives = 146/294 (49%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           G K + +TY +++ +L +  +     K+L +M+     P+ V Y  LIH + +  ++  A
Sbjct: 323 GLKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQKIIPDNVVYTTLIHGFFKLGHVRTA 382

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
              F +M      PD +TY TLI    + G +    +++ +M + GL PD  TY+ +I+ 
Sbjct: 383 NKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHEMISRGLKPDEVTYTTLIDV 442

Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPD 534
             KAG +  A  L  EMV  G  PN+VTY  +I    K     +A +L  +M+  G + +
Sbjct: 443 YCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTANELLDEMRKKGLQLN 502

Query: 535 KVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYE 594
              Y+ ++  +   G +++A  +  EM      PD   Y  ++D + + G++ KA +  +
Sbjct: 503 VCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAYCRLGDIDKAHKLLQ 562

Query: 595 AMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
            ML  GL+P V T N L++ F  +G L D   LL  ML  G+ P   TY  L+ 
Sbjct: 563 EMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGIVPDAITYNTLMK 616



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 78/251 (31%), Positives = 134/251 (53%), Gaps = 4/251 (1%)

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
           Q G   +  TY  ++  L +  +    N+LLD+M + G Q NV  YN +++   +A  + 
Sbjct: 461 QMGMTPNIVTYGALIDGLCKHGELDTANELLDEMRKKGLQLNVCIYNSMVNGICKAGNIE 520

Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
           +A+ + K+M+V G +PD +TY T+ID + + G +D A  + ++M   GL P   T++V++
Sbjct: 521 QAIKLMKEMEVAGIDPDAITYTTVIDAYCRLGDIDKAHKLLQEMLDRGLQPTVVTFNVLM 580

Query: 473 NCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFE 532
           N     G L+   +L   M+ +G +P+ +TYN ++       +  +  K+Y+ M+N G  
Sbjct: 581 NGFCMLGMLEDGDRLLGWMLEKGIVPDAITYNTLMKQHCIRNSMNTTTKIYKRMRNQGVA 640

Query: 533 PDKVTYSIVMEVLGHCGY--LDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAW 590
           PD  TY+I+++  GHC    L EA  ++ EM  K +VP    Y  L+  + K     +A 
Sbjct: 641 PDSNTYNILIK--GHCKARNLKEAWFLYKEMIEKGYVPTVTSYNALIKRFYKKRKFXEAR 698

Query: 591 EWYEAMLQAGL 601
           E +E M   GL
Sbjct: 699 ELFEEMRGHGL 709



 Score =  139 bits (349), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 82/254 (32%), Positives = 132/254 (51%)

Query: 390 GCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVA 449
           G   N  +YN +I+S  R   + EA  +  QM      PD V+Y T+ID +   G L  A
Sbjct: 253 GISWNTTSYNIIIYSLCRLGKVKEAHRLLMQMDFRSSTPDVVSYSTVIDGYCHLGELKKA 312

Query: 450 MDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIAL 509
           + +   MQ  GL P+ +TY+ II  L K G    A ++  EM++Q  IP+ V Y  +I  
Sbjct: 313 LKLMDDMQIKGLKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQKIIPDNVVYTTLIHG 372

Query: 510 QAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPD 569
             K  + ++A K + +M +    PD +TY+ +++  G  G + E + +F EM  +   PD
Sbjct: 373 FFKLGHVRTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHEMISRGLKPD 432

Query: 570 EPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQ 629
           E  Y  L+D++ KAG +  A+  +  M+Q G+ PN+ T  +L+    + G+L  A  LL 
Sbjct: 433 EVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTANELLD 492

Query: 630 GMLNLGLKPSLQTY 643
            M   GL+ ++  Y
Sbjct: 493 EMRKKGLQLNVCIY 506



 Score =  124 bits (310), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 113/500 (22%), Positives = 218/500 (43%), Gaps = 52/500 (10%)

Query: 339 DHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFG---AINKLLDQMVRDGCQPNV 395
           D+ + L FF+W R +     +       + ++    +       +  L+  +  G +   
Sbjct: 115 DYNLVLAFFDWARVRREPSLEARCIIIHIAVVSNDLRLAHELVHDYFLNSKLEIGVKMTQ 174

Query: 396 VTYNRLIHSYGRANYLNEALDVFKQMQV-VGCEPDR-------VTYCTLIDIHAKAGFLD 447
            T+ RLI++Y        A D+F Q+ V +G   +        ++Y  ++ + +   FL 
Sbjct: 175 FTH-RLIYTYKYWGPNPIAFDIFFQVLVEIGHLSEARKLLDKLLSYGLVVTVDSCNAFLS 233

Query: 448 VAMDMYKKMQAA-------GLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNL 500
              +  + ++ A       G+S +T +Y++II  L + G ++ AH+L  +M  +   P++
Sbjct: 234 RIANNSEGIEMAIKVFCEYGISWNTTSYNIIIYSLCRLGKVKEAHRLLMQMDFRSSTPDV 293

Query: 501 VTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAE 560
           V+Y+ +I         + ALKL  DMQ  G +P++ TY+ ++ +L   G   EAE V  E
Sbjct: 294 VSYSTVIDGYCHLGELKKALKLMDDMQIKGLKPNRYTYNSIILLLCKIGKSFEAEKVLRE 353

Query: 561 MRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQ 620
           M  +  +PD  VY  L+  + K G+VR A +W++ ML   + P+  T  +L+  F + G+
Sbjct: 354 MMSQKIIPDNVVYTTLIHGFFKLGHVRTANKWFDEMLSKKISPDYITYTTLIQGFGQGGK 413

Query: 621 LSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGFCHELMAVSGHPAHMFLLSM 680
           + +  +L   M++ GLKP   TYT L+    +A    +    H  M   G   ++     
Sbjct: 414 VIEPQNLFHEMISRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGA 473

Query: 681 PSPGPDGQNVRDHVGSFLEMMHSEDRESKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKN 740
              G       D     L+ M  +  +    + +++V+ + K+G  E+A  + +      
Sbjct: 474 LIDGLCKHGELDTANELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAG 533

Query: 741 VYPDAVK-------------------------EKGMSYWLINLHVMSDGTAVIAL----S 771
           + PDA+                          ++G+   ++  +V+ +G  ++ +     
Sbjct: 534 IDPDAITYTTVIDAYCRLGDIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGD 593

Query: 772 RTLAWFRKQMLISGVGPSRI 791
           R L W    ML  G+ P  I
Sbjct: 594 RLLGW----MLEKGIVPDAI 609



 Score =  106 bits (264), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 59/191 (30%), Positives = 101/191 (52%)

Query: 354 AGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNE 413
           AG   D  TYTT++    R       +KLL +M+  G QP VVT+N L++ +     L +
Sbjct: 532 AGIDPDAITYTTVIDAYCRLGDIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLED 591

Query: 414 ALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIIN 473
              +   M   G  PD +TY TL+  H     ++    +YK+M+  G++PD+ TY+++I 
Sbjct: 592 GDRLLGWMLEKGIVPDAITYNTLMKQHCIRNSMNTTTKIYKRMRNQGVAPDSNTYNILIK 651

Query: 474 CLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEP 533
              KA +L+ A  L+ EM+ +G +P + +YN +I    K R +  A +L+ +M+  G   
Sbjct: 652 GHCKARNLKEAWFLYKEMIEKGYVPTVTSYNALIKRFYKKRKFXEARELFEEMRGHGLVA 711

Query: 534 DKVTYSIVMEV 544
           D   Y+  +++
Sbjct: 712 DGEIYNFFVDM 722



 Score = 71.6 bits (174), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 58/235 (24%), Positives = 108/235 (45%), Gaps = 23/235 (9%)

Query: 295 GNVVESVSRILRQWKWGPLAEEALGNTNYSMDAY-------QANQVLKQLQDHTVALGFF 347
           GN+ +++ +++++ +   +  +A+  T   +DAY       +A+++L+++ D  +     
Sbjct: 517 GNIEQAI-KLMKEMEVAGIDPDAITYTT-VIDAYCRLGDIDKAHKLLQEMLDRGLQPTVV 574

Query: 348 NWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGR 407
            +     GF         M+G+L         ++LL  M+  G  P+ +TYN L+  +  
Sbjct: 575 TFNVLMNGF--------CMLGMLEDG------DRLLGWMLEKGIVPDAITYNTLMKQHCI 620

Query: 408 ANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFT 467
            N +N    ++K+M+  G  PD  TY  LI  H KA  L  A  +YK+M   G  P   +
Sbjct: 621 RNSMNTTTKIYKRMRNQGVAPDSNTYNILIKGHCKARNLKEAWFLYKEMIEKGYVPTVTS 680

Query: 468 YSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKL 522
           Y+ +I    K      A +LF EM   G + +   YN  + +  +  + +  L L
Sbjct: 681 YNALIKRFYKKRKFXEARELFEEMRGHGLVADGEIYNFFVDMCYEEGDVEITLNL 735



 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 43/167 (25%), Positives = 73/167 (43%), Gaps = 5/167 (2%)

Query: 333 VLKQLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQ 392
           +L  L+D    LG   W+  + G   D  TY T++             K+  +M   G  
Sbjct: 585 MLGMLEDGDRLLG---WML-EKGIVPDAITYNTLMKQHCIRNSMNTTTKIYKRMRNQGVA 640

Query: 393 PNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDM 452
           P+  TYN LI  + +A  L EA  ++K+M   G  P   +Y  LI    K      A ++
Sbjct: 641 PDSNTYNILIKGHCKARNLKEAWFLYKEMIEKGYVPTVTSYNALIKRFYKKRKFXEAREL 700

Query: 453 YKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPN 499
           +++M+  GL  D   Y+  ++   + G ++    L C+   + C+ N
Sbjct: 701 FEEMRGHGLVADGEIYNFFVDMCYEEGDVEITLNL-CDEAIEKCLLN 746


>gi|7529747|emb|CAB86932.1| putative protein [Arabidopsis thaliana]
 gi|24030379|gb|AAN41351.1| unknown protein [Arabidopsis thaliana]
          Length = 526

 Score =  157 bits (398), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 91/349 (26%), Positives = 174/349 (49%), Gaps = 6/349 (1%)

Query: 334 LKQLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQP 393
            KQL+   +      WLR Q  +   E  +  ++   G+   F    ++L  + + G  P
Sbjct: 56  FKQLKKWNLVSEILEWLRYQNWWNFSEIDFLMLITAYGKLGNFNGAERVLSVLSKMGSTP 115

Query: 394 NVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMY 453
           NV++Y  L+ SYGR    N A  +F++MQ  G EP  +TY  ++    +      A +++
Sbjct: 116 NVISYTALMESYGRGGKCNNAEAIFRRMQSSGPEPSAITYQIILKTFVEGDKFKEAEEVF 175

Query: 454 KKM---QAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQ 510
           + +   + + L PD   Y ++I    KAG+ + A ++F  MV +G   + VTYN +++ +
Sbjct: 176 ETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTVTYNSLMSFE 235

Query: 511 AKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDE 570
               +Y+   K+Y  MQ +  +PD V+Y+++++  G     +EA +VF EM      P  
Sbjct: 236 T---SYKEVSKIYDQMQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTH 292

Query: 571 PVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQG 630
             Y +L+D +  +G V +A   +++M +  + P++ +  ++LSA++    +  A    + 
Sbjct: 293 KAYNILLDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKR 352

Query: 631 MLNLGLKPSLQTYTLLLSCCTEARSPYDMGFCHELMAVSGHPAHMFLLS 679
           +   G +P++ TY  L+    +A     M   +E M +SG  A+  +L+
Sbjct: 353 IKVDGFEPNIVTYGTLIKGYAKANDVEKMMEVYEKMRLSGIKANQTILT 401



 Score =  119 bits (299), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 68/256 (26%), Positives = 127/256 (49%), Gaps = 13/256 (5%)

Query: 349 WLRRQAG-FKHDEHTYTTMVG------------ILGRARQFGAINKLLDQMVRDGCQPNV 395
           ++ ++AG ++     +++MVG            ++     +  ++K+ DQM R   QP+V
Sbjct: 198 YMYKKAGNYEKARKVFSSMVGKGVPQSTVTYNSLMSFETSYKEVSKIYDQMQRSDIQPDV 257

Query: 396 VTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKK 455
           V+Y  LI +YGRA    EAL VF++M   G  P    Y  L+D  A +G ++ A  ++K 
Sbjct: 258 VSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKS 317

Query: 456 MQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARN 515
           M+   + PD ++Y+ +++    A  ++ A + F  +   G  PN+VTY  +I   AKA +
Sbjct: 318 MRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYAKAND 377

Query: 516 YQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGL 575
            +  +++Y  M+ +G + ++   + +M+  G C     A   + EM      PD+    +
Sbjct: 378 VEKMMEVYEKMRLSGIKANQTILTTIMDASGRCKNFGSALGWYKEMESCGVPPDQKAKNV 437

Query: 576 LVDLWGKAGNVRKAWE 591
           L+ L      + +A E
Sbjct: 438 LLSLASTQDELEEAKE 453



 Score =  114 bits (284), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 73/299 (24%), Positives = 140/299 (46%), Gaps = 14/299 (4%)

Query: 329 QANQVLKQLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVR 388
           +A +V + L D            +++  K D+  Y  M+ +  +A  +    K+   MV 
Sbjct: 170 EAEEVFETLLDE-----------KKSPLKPDQKMYHMMIYMYKKAGNYEKARKVFSSMVG 218

Query: 389 DGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDV 448
            G   + VTYN L+      +Y  E   ++ QMQ    +PD V+Y  LI  + +A   + 
Sbjct: 219 KGVPQSTVTYNSLMSF--ETSY-KEVSKIYDQMQRSDIQPDVVSYALLIKAYGRARREEE 275

Query: 449 AMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIA 508
           A+ ++++M  AG+ P    Y+++++    +G ++ A  +F  M      P+L +Y  M++
Sbjct: 276 ALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLS 335

Query: 509 LQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVP 568
               A + + A K ++ ++  GFEP+ VTY  +++       +++   V+ +MR      
Sbjct: 336 AYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYAKANDVEKMMEVYEKMRLSGIKA 395

Query: 569 DEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHL 627
           ++ +   ++D  G+  N   A  WY+ M   G+ P+    N LLS      +L +A  L
Sbjct: 396 NQTILTTIMDASGRCKNFGSALGWYKEMESCGVPPDQKAKNVLLSLASTQDELEEAKEL 454



 Score = 89.0 bits (219), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 63/280 (22%), Positives = 127/280 (45%), Gaps = 41/280 (14%)

Query: 468 YSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQ 527
           + ++I   GK G+   A ++   +   G  PN+++Y  ++    +     +A  ++R MQ
Sbjct: 85  FLMLITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRRMQ 144

Query: 528 NAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEM---RRKNWVPDEPVYGLLVDLWGKAG 584
           ++G EP  +TY I+++         EAE VF  +   ++    PD+ +Y +++ ++ KAG
Sbjct: 145 SSGPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAG 204

Query: 585 NVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYT 644
           N  KA + + +M+  G+  +  T NSL+S      ++S  Y  +Q      ++P + +Y 
Sbjct: 205 NYEKARKVFSSMVGKGVPQSTVTYNSLMSFETSYKEVSKIYDQMQ---RSDIQPDVVSYA 261

Query: 645 LLLSCCTEARSPYDMGFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSE 704
           LL+     AR         E ++V                            F EM+ + 
Sbjct: 262 LLIKAYGRARRE------EEALSV----------------------------FEEMLDAG 287

Query: 705 DRESKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPD 744
            R + +   + ++D    SG+ E+A +V++   +  ++PD
Sbjct: 288 VRPTHKAY-NILLDAFAISGMVEQAKTVFKSMRRDRIFPD 326


>gi|4836917|gb|AAD30619.1|AC007153_11 similar to indole-3-acetate beta-glucosyltransferase [Arabidopsis
            thaliana]
          Length = 1184

 Score =  157 bits (398), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 89/296 (30%), Positives = 148/296 (50%)

Query: 352  RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
            ++ G K + + Y +++G+L R  +     +   +M+R G  P+ V Y  LI  + +   +
Sbjct: 751  KRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDI 810

Query: 412  NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
              A   F +M      PD +TY  +I    + G +  A  ++ +M   GL PD+ T++ +
Sbjct: 811  RAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTEL 870

Query: 472  INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF 531
            IN   KAGH++ A ++   M+  GC PN+VTY  +I    K  +  SA +L  +M   G 
Sbjct: 871  INGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGL 930

Query: 532  EPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWE 591
            +P+  TY+ ++  L   G ++EA  +  E        D   Y  L+D + K+G + KA E
Sbjct: 931  QPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQE 990

Query: 592  WYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
              + ML  GL+P + T N L++ F   G L D   LL  ML  G+ P+  T+  L+
Sbjct: 991  ILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLV 1046



 Score =  151 bits (381), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 98/330 (29%), Positives = 163/330 (49%), Gaps = 11/330 (3%)

Query: 350  LRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRAN 409
            L    G+  D  +Y+T+V    R  +   + KL++ M R G +PN   Y  +I    R  
Sbjct: 714  LMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRIC 773

Query: 410  YLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYS 469
             L EA + F +M   G  PD V Y TLID   K G +  A   + +M +  ++PD  TY+
Sbjct: 774  KLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYT 833

Query: 470  VIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNA 529
             II+   + G +  A +LF EM  +G  P+ VT+  +I    KA + + A +++  M  A
Sbjct: 834  AIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQA 893

Query: 530  GFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKA 589
            G  P+ VTY+ +++ L   G LD A  +  EM +    P+   Y  +V+   K+GN+ +A
Sbjct: 894  GCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEA 953

Query: 590  WEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSC 649
             +       AGL  +  T  +L+ A+ + G++  A  +L+ ML  GL+P++ T+ +L++ 
Sbjct: 954  VKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMN- 1012

Query: 650  CTEARSPYDMGFCHELMAVSGHPAHMFLLS 679
                      GFC   M   G     ++L+
Sbjct: 1013 ----------GFCLHGMLEDGEKLLNWMLA 1032



 Score =  148 bits (374), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 108/382 (28%), Positives = 178/382 (46%), Gaps = 9/382 (2%)

Query: 347  FNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYG 406
            F+ + RQ G   D   YTT++    +     A +K   +M      P+V+TY  +I  + 
Sbjct: 782  FSEMIRQ-GILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFC 840

Query: 407  RANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTF 466
            +   + EA  +F +M   G EPD VT+  LI+ + KAG +  A  ++  M  AG SP+  
Sbjct: 841  QIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVV 900

Query: 467  TYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDM 526
            TY+ +I+ L K G L +A++L  EM   G  PN+ TYN ++    K+ N + A+KL  + 
Sbjct: 901  TYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEF 960

Query: 527  QNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNV 586
            + AG   D VTY+ +M+     G +D+A+ +  EM  K   P    + +L++ +   G +
Sbjct: 961  EAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGML 1020

Query: 587  RKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLL 646
                +    ML  G+ PN  T NSL+  +     L  A  + + M + G+ P  +TY  L
Sbjct: 1021 EDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENL 1080

Query: 647  LSCCTEARSPYDMGFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDR 706
            +    +AR+  +  F  + M   G    +   S+   G   +        FLE     D+
Sbjct: 1081 VKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRK------KFLEAREVFDQ 1134

Query: 707  ESKRGLV--DAVVDFLHKSGLK 726
              + GL     + DF   +  K
Sbjct: 1135 MRREGLAADKEIFDFFSDTKYK 1156



 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 78/250 (31%), Positives = 133/250 (53%)

Query: 394 NVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMY 453
           NV +YN +IH   +   + EA  +   M++ G  PD ++Y T+++ + + G LD    + 
Sbjct: 688 NVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLI 747

Query: 454 KKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKA 513
           + M+  GL P+++ Y  II  L +   L  A + F EM+ QG +P+ V Y  +I    K 
Sbjct: 748 EVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKR 807

Query: 514 RNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVY 573
            + ++A K + +M +    PD +TY+ ++      G + EA  +F EM  K   PD   +
Sbjct: 808 GDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTF 867

Query: 574 GLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLN 633
             L++ + KAG+++ A+  +  M+QAG  PNV T  +L+    + G L  A  LL  M  
Sbjct: 868 TELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWK 927

Query: 634 LGLKPSLQTY 643
           +GL+P++ TY
Sbjct: 928 IGLQPNIFTY 937



 Score =  124 bits (311), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 77/278 (27%), Positives = 142/278 (51%), Gaps = 3/278 (1%)

Query: 370 LGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPD 429
           LGR ++    + LL  M   G  P+V++Y+ +++ Y R   L++   + + M+  G +P+
Sbjct: 702 LGRIKE---AHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPN 758

Query: 430 RVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFC 489
              Y ++I +  +   L  A + + +M   G+ PDT  Y+ +I+   K G ++AA + F 
Sbjct: 759 SYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFY 818

Query: 490 EMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCG 549
           EM ++   P+++TY  +I+   +  +   A KL+ +M   G EPD VT++ ++      G
Sbjct: 819 EMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAG 878

Query: 550 YLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCN 609
           ++ +A  V   M +    P+   Y  L+D   K G++  A E    M + GL+PN+ T N
Sbjct: 879 HMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYN 938

Query: 610 SLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
           S+++   + G + +A  L+      GL     TYT L+
Sbjct: 939 SIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLM 976



 Score =  106 bits (264), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 70/281 (24%), Positives = 135/281 (48%)

Query: 449 AMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIA 508
           A+ ++++    G+  +  +Y+++I+ + + G ++ AH L   M  +G  P++++Y+ ++ 
Sbjct: 673 AIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVN 732

Query: 509 LQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVP 568
              +        KL   M+  G +P+   Y  ++ +L     L EAE  F+EM R+  +P
Sbjct: 733 GYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILP 792

Query: 569 DEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLL 628
           D  VY  L+D + K G++R A +++  M    + P+V T  +++S F ++G + +A  L 
Sbjct: 793 DTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLF 852

Query: 629 QGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGFCHELMAVSGHPAHMFLLSMPSPGPDGQ 688
             M   GL+P   T+T L++   +A    D    H  M  +G   ++   +    G   +
Sbjct: 853 HEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKE 912

Query: 689 NVRDHVGSFLEMMHSEDRESKRGLVDAVVDFLHKSGLKEEA 729
              D     L  M     +      +++V+ L KSG  EEA
Sbjct: 913 GDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEA 953


>gi|302829725|ref|XP_002946429.1| hypothetical protein VOLCADRAFT_103021 [Volvox carteri f.
           nagariensis]
 gi|300268175|gb|EFJ52356.1| hypothetical protein VOLCADRAFT_103021 [Volvox carteri f.
           nagariensis]
          Length = 961

 Score =  157 bits (398), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 109/396 (27%), Positives = 190/396 (47%), Gaps = 48/396 (12%)

Query: 269 ERFSKPSREMKIPAGLAPFSRHFASTGNVVESVSRILRQWKWGPLAEEALGNTNYSMDAY 328
           ++ +K S+  K+   L       A +   VE + +I+ +      A +A+    Y +D+ 
Sbjct: 182 QQVTKVSKGQKLQDNLG-----LAFSDMTVEDLLKIVLKLAPQEPAVDAIKQGLYYLDSS 236

Query: 329 QANQVLKQLQDHTV---ALGFFNWLR-----RQAGFKHDEHTYTTMVGILGRARQFGAIN 380
               +LK+L        A+  F+WLR      +     D +TYTTM+   G  +Q     
Sbjct: 237 AMAALLKELAKQGYLKRAVEIFDWLRNLEPSHELSSLCDLYTYTTMISQCGSHQQLRRAL 296

Query: 381 KLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIH 440
           +L+ +M   G   NV TY+ L++   +AN L+ A DV+KQM   GC P+ VTY  LID++
Sbjct: 297 ELVAEMRSRGIDCNVHTYSALMNVCIKANELDLAQDVYKQMLEEGCSPNLVTYNILIDVY 356

Query: 441 A-----------------------------------KAGFLDVAMDMYKKMQAAGLSPDT 465
                                               K+G  + A+ +Y+KM AAG+ P  
Sbjct: 357 VKRCQWEEAVKVLDTLEKQAIQAEVRTYNTVISACNKSGQPEQALKVYEKMLAAGVKPSA 416

Query: 466 FTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRD 525
            TY+ +I+  GK G ++ A ++F +M+ +GC  N++TY+ +I+   KA  ++ AL+L+  
Sbjct: 417 TTYTALISAYGKKGQVEKALEIFRDMIRRGCERNVITYSSLISACEKAGRWEMALELFSK 476

Query: 526 MQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGN 585
           M     +P+ VT++ ++    H G+ ++A  +F +M+ +   PD   Y  L+  + + G 
Sbjct: 477 MHKENCKPNVVTFNSLIAACSHGGHWEKASELFEQMQTQGCKPDSITYCGLITAYERGGQ 536

Query: 586 VRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQL 621
            R+A + +E M   G  P+    NSL+    + G L
Sbjct: 537 WRRALKAFEQMQTQGCHPDAAVFNSLMEVLWQSGVL 572



 Score =  129 bits (325), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 99/409 (24%), Positives = 190/409 (46%), Gaps = 20/409 (4%)

Query: 401 LIHSYGRANYLNEALDVFKQMQVVGCEP--------DRVTYCTLIDIHAKAGFLDVAMDM 452
           L+    +  YL  A+++F  ++    EP        D  TY T+I        L  A+++
Sbjct: 241 LLKELAKQGYLKRAVEIFDWLR--NLEPSHELSSLCDLYTYTTMISQCGSHQQLRRALEL 298

Query: 453 YKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAK 512
             +M++ G+  +  TYS ++N   KA  L  A  ++ +M+ +GC PNLVTYNI+I +  K
Sbjct: 299 VAEMRSRGIDCNVHTYSALMNVCIKANELDLAQDVYKQMLEEGCSPNLVTYNILIDVYVK 358

Query: 513 ARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPV 572
              ++ A+K+   ++    + +  TY+ V+      G  ++A  V+ +M      P    
Sbjct: 359 RCQWEEAVKVLDTLEKQAIQAEVRTYNTVISACNKSGQPEQALKVYEKMLAAGVKPSATT 418

Query: 573 YGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGML 632
           Y  L+  +GK G V KA E +  M++ G   NV T +SL+SA  + G+   A  L   M 
Sbjct: 419 YTALISAYGKKGQVEKALEIFRDMIRRGCERNVITYSSLISACEKAGRWEMALELFSKMH 478

Query: 633 NLGLKPSLQTYTLLLSCCTEARSPYDMGFCHELMAVSG-HPAHMFLLSMPSPGPDGQNVR 691
               KP++ T+  L++ C+            E M   G  P  +    + +    G   R
Sbjct: 479 KENCKPNVVTFNSLIAACSHGGHWEKASELFEQMQTQGCKPDSITYCGLITAYERGGQWR 538

Query: 692 DHVGSFLEMMHSEDRESKRGLVDAVVDFLHKSGL---KEEAGSVWEVAAQK---NVYPDA 745
             + +F E M ++       + +++++ L +SG+   + +A  +W +A +     +Y ++
Sbjct: 539 RALKAF-EQMQTQGCHPDAAVFNSLMEVLWQSGVLLAQSKALQLWTLANRSGHFRIYTNS 597

Query: 746 VKEKGMSYWLINLHVMSDGTAVIALSRTLAWFRKQMLISGVGPSRIDIV 794
            ++  +  +  +    + G AV+ + R ++  + ++L  G G  R  +V
Sbjct: 598 KQDSNVLQY--STVAFTSGAAVVTVVRWVSELKNKLLKDGPGFFRDKVV 644



 Score =  121 bits (304), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 77/255 (30%), Positives = 127/255 (49%)

Query: 394 NVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMY 453
           ++ TY  +I   G    L  AL++  +M+  G + +  TY  L+++  KA  LD+A D+Y
Sbjct: 275 DLYTYTTMISQCGSHQQLRRALELVAEMRSRGIDCNVHTYSALMNVCIKANELDLAQDVY 334

Query: 454 KKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKA 513
           K+M   G SP+  TY+++I+   K    + A ++   +  Q     + TYN +I+   K+
Sbjct: 335 KQMLEEGCSPNLVTYNILIDVYVKRCQWEEAVKVLDTLEKQAIQAEVRTYNTVISACNKS 394

Query: 514 RNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVY 573
              + ALK+Y  M  AG +P   TY+ ++   G  G +++A  +F +M R+    +   Y
Sbjct: 395 GQPEQALKVYEKMLAAGVKPSATTYTALISAYGKKGQVEKALEIFRDMIRRGCERNVITY 454

Query: 574 GLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLN 633
             L+    KAG    A E +  M +   +PNV T NSL++A    G    A  L + M  
Sbjct: 455 SSLISACEKAGRWEMALELFSKMHKENCKPNVVTFNSLIAACSHGGHWEKASELFEQMQT 514

Query: 634 LGLKPSLQTYTLLLS 648
            G KP   TY  L++
Sbjct: 515 QGCKPDSITYCGLIT 529



 Score = 89.0 bits (219), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 43/138 (31%), Positives = 80/138 (57%), Gaps = 2/138 (1%)

Query: 346 FFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSY 405
           F + +RR  G + +  TY++++    +A ++    +L  +M ++ C+PNVVT+N LI + 
Sbjct: 439 FRDMIRR--GCERNVITYSSLISACEKAGRWEMALELFSKMHKENCKPNVVTFNSLIAAC 496

Query: 406 GRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDT 465
               +  +A ++F+QMQ  GC+PD +TYC LI  + + G    A+  +++MQ  G  PD 
Sbjct: 497 SHGGHWEKASELFEQMQTQGCKPDSITYCGLITAYERGGQWRRALKAFEQMQTQGCHPDA 556

Query: 466 FTYSVIINCLGKAGHLQA 483
             ++ ++  L ++G L A
Sbjct: 557 AVFNSLMEVLWQSGVLLA 574


>gi|413926076|gb|AFW66008.1| hypothetical protein ZEAMMB73_411794 [Zea mays]
          Length = 633

 Score =  157 bits (398), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 87/256 (33%), Positives = 135/256 (52%), Gaps = 15/256 (5%)

Query: 289 RHFASTGNVVESVSRILRQWKWGPLAEEALGNTNYSMDAYQANQVLKQL---QDHTVALG 345
           +    +G+  E+ S   R W           N++   D Y    +L+ L   +  T A+ 
Sbjct: 363 KALCKSGHASEAHSVFCRMW-----------NSHEKGDRYAFVSMLEALCNAEKTTEAID 411

Query: 346 FFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSY 405
             + +  + G   D   Y  +   LG+ +Q   ++ L D M  +G  P+V TYN +I S+
Sbjct: 412 LLHMMPEK-GITTDVGMYNMIFSALGKLKQVSFMSSLYDTMRANGVVPDVFTYNIMISSF 470

Query: 406 GRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDT 465
           GR   +++A ++F++M+   C+PD VTY ++I+   K G LD A  ++K MQ  G  PD 
Sbjct: 471 GRVGLVDKASELFEEMEDGSCKPDVVTYNSMINCLGKNGDLDEAHMLFKDMQEKGYDPDV 530

Query: 466 FTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRD 525
           FTYS++I C GK+  +  A  LF EMV QGCIPN+VTYNI++    +      A K Y  
Sbjct: 531 FTYSILIECFGKSNKVDMACSLFDEMVAQGCIPNIVTYNILLDCLERRGKTTEAHKFYET 590

Query: 526 MQNAGFEPDKVTYSIV 541
           ++  G  PD +TYSI+
Sbjct: 591 LKQQGLTPDSITYSIL 606



 Score =  145 bits (365), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 91/344 (26%), Positives = 158/344 (45%), Gaps = 6/344 (1%)

Query: 308 WKWGPLAEEALGNTNYSMDAYQANQVLKQLQDHTVALGFFNWLR--RQAGFKHDEHTYTT 365
           WK G    E +    Y +D +  N +L  L    +    +      +Q     D +TYT 
Sbjct: 200 WK-GFEVYEKMRRKGYKLDIFAYNMLLNALAKAGMVDQAYQVFEDMKQNYCDPDAYTYTI 258

Query: 366 MVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVG 425
           ++ + G+A +      LL++MV +GC  N++ YN +I + G+   ++EA+ +  +M    
Sbjct: 259 LIRMSGKAGKTTKFVSLLEEMVSEGCVLNLIAYNTVIEALGKNKMVDEAIFMLSKMIESD 318

Query: 426 CEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAH 485
           C P++ TY  ++D+ +  G L    ++          P    YS +I  L K+GH   AH
Sbjct: 319 CRPNQFTYSIMLDVLSTGGQLHRLNEILDICSGCLNRP---VYSYLIKALCKSGHASEAH 375

Query: 486 QLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVL 545
            +FC M N     +   +  M+     A     A+ L   M   G   D   Y+++   L
Sbjct: 376 SVFCRMWNSHEKGDRYAFVSMLEALCNAEKTTEAIDLLHMMPEKGITTDVGMYNMIFSAL 435

Query: 546 GHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNV 605
           G    +    +++  MR    VPD   Y +++  +G+ G V KA E +E M     +P+V
Sbjct: 436 GKLKQVSFMSSLYDTMRANGVVPDVFTYNIMISSFGRVGLVDKASELFEEMEDGSCKPDV 495

Query: 606 PTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSC 649
            T NS+++   + G L +A+ L + M   G  P + TY++L+ C
Sbjct: 496 VTYNSMINCLGKNGDLDEAHMLFKDMQEKGYDPDVFTYSILIEC 539



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 85/290 (29%), Positives = 152/290 (52%), Gaps = 3/290 (1%)

Query: 357 KHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALD 416
           + ++ TY+ M+ +L    Q   +N++LD  +  GC  N   Y+ LI +  ++ + +EA  
Sbjct: 320 RPNQFTYSIMLDVLSTGGQLHRLNEILD--ICSGCL-NRPVYSYLIKALCKSGHASEAHS 376

Query: 417 VFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLG 476
           VF +M     + DR  + ++++    A     A+D+   M   G++ D   Y++I + LG
Sbjct: 377 VFCRMWNSHEKGDRYAFVSMLEALCNAEKTTEAIDLLHMMPEKGITTDVGMYNMIFSALG 436

Query: 477 KAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKV 536
           K   +     L+  M   G +P++ TYNIMI+   +      A +L+ +M++   +PD V
Sbjct: 437 KLKQVSFMSSLYDTMRANGVVPDVFTYNIMISSFGRVGLVDKASELFEEMEDGSCKPDVV 496

Query: 537 TYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAM 596
           TY+ ++  LG  G LDEA  +F +M+ K + PD   Y +L++ +GK+  V  A   ++ M
Sbjct: 497 TYNSMINCLGKNGDLDEAHMLFKDMQEKGYDPDVFTYSILIECFGKSNKVDMACSLFDEM 556

Query: 597 LQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLL 646
           +  G  PN+ T N LL    R G+ ++A+   + +   GL P   TY++L
Sbjct: 557 VAQGCIPNIVTYNILLDCLERRGKTTEAHKFYETLKQQGLTPDSITYSIL 606



 Score =  130 bits (328), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 120/495 (24%), Positives = 224/495 (45%), Gaps = 58/495 (11%)

Query: 296 NVVESVSRILRQ-WKWGPLAE--EALGNTNYSMDAYQANQVLKQLQ-DHTVALGFFNWLR 351
           +++ +V+RILR      PL +  + L +   ++   +A++V+K L  D ++AL FF +  
Sbjct: 49  HLICAVARILRSPVSHTPLLDLDDYLRSLRLTLTTAEASEVMKALAPDTSLALSFFRFAA 108

Query: 352 RQ-AGFKHDEHTYTTMVGIL--GRARQFGAINKLLDQMVRDGCQPNV------------- 395
               GF+HD  +Y  ++ +L   RA    A+ +L+ +M RDG   N+             
Sbjct: 109 TSLPGFRHDAFSYNRILVLLFSNRADPAEAM-RLIAEMERDGVPGNISTVNLLVGMGVEV 167

Query: 396 ----------------VTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDI 439
                            TY  L+ ++ R+  + +  +V+++M+  G + D   Y  L++ 
Sbjct: 168 GRCLDLASKWGLRLNGYTYKCLVQAHLRSREVWKGFEVYEKMRRKGYKLDIFAYNMLLNA 227

Query: 440 HAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPN 499
            AKAG +D A  +++ M+     PD +TY+++I   GKAG       L  EMV++GC+ N
Sbjct: 228 LAKAGMVDQAYQVFEDMKQNYCDPDAYTYTILIRMSGKAGKTTKFVSLLEEMVSEGCVLN 287

Query: 500 LVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFA 559
           L+ YN +I    K +    A+ +   M  +   P++ TYSI+++VL   G          
Sbjct: 288 LIAYNTVIEALGKNKMVDEAIFMLSKMIESDCRPNQFTYSIMLDVLSTGG---------- 337

Query: 560 EMRRKNWVPD-------EPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLL 612
           ++ R N + D        PVY  L+    K+G+  +A   +  M  +  + +     S+L
Sbjct: 338 QLHRLNEILDICSGCLNRPVYSYLIKALCKSGHASEAHSVFCRMWNSHEKGDRYAFVSML 397

Query: 613 SAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGFCHELMAVSGHP 672
            A     + ++A  LL  M   G+   +  Y ++ S   + +    M   ++ M  +G  
Sbjct: 398 EALCNAEKTTEAIDLLHMMPEKGITTDVGMYNMIFSALGKLKQVSFMSSLYDTMRANGVV 457

Query: 673 AHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRESKRGLV--DAVVDFLHKSGLKEEAG 730
             +F  ++         + D      E M  ED   K  +V  +++++ L K+G  +EA 
Sbjct: 458 PDVFTYNIMISSFGRVGLVDKASELFEEM--EDGSCKPDVVTYNSMINCLGKNGDLDEAH 515

Query: 731 SVWEVAAQKNVYPDA 745
            +++   +K   PD 
Sbjct: 516 MLFKDMQEKGYDPDV 530



 Score =  113 bits (282), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 57/180 (31%), Positives = 101/180 (56%), Gaps = 3/180 (1%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           R  G   D  TY  M+   GR       ++L ++M    C+P+VVTYN +I+  G+   L
Sbjct: 452 RANGVVPDVFTYNIMISSFGRVGLVDKASELFEEMEDGSCKPDVVTYNSMINCLGKNGDL 511

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
           +EA  +FK MQ  G +PD  TY  LI+   K+  +D+A  ++ +M A G  P+  TY+++
Sbjct: 512 DEAHMLFKDMQEKGYDPDVFTYSILIECFGKSNKVDMACSLFDEMVAQGCIPNIVTYNIL 571

Query: 472 INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF 531
           ++CL + G    AH+ +  +  QG  P+ +TY+I+  L++++   Q  +++ +  +N G+
Sbjct: 572 LDCLERRGKTTEAHKFYETLKQQGLTPDSITYSILERLESRS---QRTVRIRKPSRNTGW 628


>gi|302792252|ref|XP_002977892.1| hypothetical protein SELMODRAFT_107734 [Selaginella moellendorffii]
 gi|300154595|gb|EFJ21230.1| hypothetical protein SELMODRAFT_107734 [Selaginella moellendorffii]
          Length = 500

 Score =  157 bits (398), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 99/298 (33%), Positives = 155/298 (52%), Gaps = 3/298 (1%)

Query: 359 DEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVF 418
           D  TYT+++  L + ++       L +MV  G  P+V TY  +IH+    N L+EA    
Sbjct: 10  DFVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEARKFL 69

Query: 419 KQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKA 478
           ++M      P+ VTY  LID   K G +D A+ +  KM+   + P   TY+ +I+ L KA
Sbjct: 70  EEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRKKCV-PTAVTYNSLISGLCKA 128

Query: 479 GHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTY 538
                A+ L  EMV  GCIP++ TY  +I    K++    AL+++  +   GF PD VTY
Sbjct: 129 ERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVTY 188

Query: 539 SIVMEVLGHCGYLDEAEAVFAEM-RRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAML 597
           S +++ L   G L EA  +F  M +  + +P+   Y  L+  + + G + +A    E M 
Sbjct: 189 SCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMA 248

Query: 598 QAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS-CCTEAR 654
           + G  P+V T  +L++ F ++ +L DAY LL  M   GL P + T+T L+   C E R
Sbjct: 249 ETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCRENR 306



 Score =  145 bits (366), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 95/305 (31%), Positives = 145/305 (47%), Gaps = 5/305 (1%)

Query: 362 TYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQM 421
           TYT ++  L +  +      LL +M R  C P  VTYN LI    +A   +EA D+ ++M
Sbjct: 83  TYTVLIDGLCKGGRVDEAVALLSKM-RKKCVPTAVTYNSLISGLCKAERASEAYDLLEEM 141

Query: 422 QVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHL 481
              GC PD  TY TLI    K+   D A+ +++++ A G  PD  TYS +I+ L K G L
Sbjct: 142 VYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVTYSCLIDGLCKEGRL 201

Query: 482 QAAHQLFCEMVNQG-CIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSI 540
           + A  LF  M+  G C+PN VTYN +I+   +      A+ L   M   G  PD VTY+ 
Sbjct: 202 KEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMAETGSSPDVVTYTT 261

Query: 541 VMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAG 600
           +M        LD+A  +  +M RK   PD   +  L+D   +   +  A      M +  
Sbjct: 262 LMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCRENRLSDAVHILGEMRRKS 321

Query: 601 LRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL-SCCTEARSPYDM 659
             P V T N++L  + R  QL +A   +  +  +   P++ ++ +++   C   RS   M
Sbjct: 322 CSPTVYTYNTILDGYCRANQLEEARKFM--LEEMDCPPNVVSFNIMIRGLCKVNRSSEAM 379

Query: 660 GFCHE 664
               E
Sbjct: 380 ELVEE 384



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 94/308 (30%), Positives = 155/308 (50%), Gaps = 11/308 (3%)

Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMV-GILGRARQFGAINKLLDQMVRDG-CQPNVVTYNR 400
           AL  F  L  + GF+ D  TY+ ++ G+    R   AI+ L  +M++ G C PN VTYN 
Sbjct: 169 ALRVFEQLVAR-GFRPDVVTYSCLIDGLCKEGRLKEAID-LFGRMIKSGSCMPNTVTYNS 226

Query: 401 LIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAG 460
           LI  + R   ++EA+++ ++M   G  PD VTY TL++   K   LD A D+  +M   G
Sbjct: 227 LISGFCRMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKG 286

Query: 461 LSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSAL 520
           L+PD  T++ +++ L +   L  A  +  EM  + C P + TYN ++    +A   + A 
Sbjct: 287 LTPDVVTFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRANQLEEAR 346

Query: 521 KLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLW 580
           K    ++     P+ V+++I++  L       EA  +  E RR+   PD  +Y  ++D  
Sbjct: 347 KFM--LEEMDCPPNVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDGL 404

Query: 581 GKAGNVRKAWEWYEAMLQA-GLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPS 639
            +   V +A   Y  ML+  G  PN  T ++L++     G L  A    +G +  G  P+
Sbjct: 405 CREKKVDEACRVYRKMLEEPGCLPNSITYSTLITGLCNAGMLDRA----RGYIEKGCVPN 460

Query: 640 LQTYTLLL 647
           + TY LL+
Sbjct: 461 IGTYNLLI 468



 Score =  132 bits (333), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 100/331 (30%), Positives = 153/331 (46%), Gaps = 27/331 (8%)

Query: 389 DGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDV 448
           + C  + VTY  LI    +   L +AL    +M   G  PD  TY  +I        L  
Sbjct: 5   NSCSADFVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHE 64

Query: 449 AMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIA 508
           A    ++M    L+P+  TY+V+I+ L K G +  A  L  +M  + C+P  VTYN +I+
Sbjct: 65  ARKFLEEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKM-RKKCVPTAVTYNSLIS 123

Query: 509 LQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVP 568
              KA     A  L  +M  +G  PD  TY+ ++         D+A  VF ++  + + P
Sbjct: 124 GLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRP 183

Query: 569 DEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAG-LRPNVPTCNSLLSAFLRVGQLSDAYHL 627
           D   Y  L+D   K G +++A + +  M+++G   PN  T NSL+S F R+G++ +A +L
Sbjct: 184 DVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNL 243

Query: 628 LQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGFCHELMAVSGHPAHMFLLSMPSPG--P 685
           L+ M   G  P + TYT L++           GFC          A+  L  M   G  P
Sbjct: 244 LERMAETGSSPDVVTYTTLMN-----------GFCK---LARLDDAYDLLNQMTRKGLTP 289

Query: 686 DGQNVRDHVGSFLEMMHSEDRESKRGLVDAV 716
           D       V +F  +M    RE++  L DAV
Sbjct: 290 D-------VVTFTSLMDGLCRENR--LSDAV 311



 Score =  123 bits (309), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 82/295 (27%), Positives = 142/295 (48%), Gaps = 7/295 (2%)

Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLI 402
           A+  F  + +      +  TY +++    R  +      LL++M   G  P+VVTY  L+
Sbjct: 204 AIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMAETGSSPDVVTYTTLM 263

Query: 403 HSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLS 462
           + + +   L++A D+  QM   G  PD VT+ +L+D   +   L  A+ +  +M+    S
Sbjct: 264 NGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCRENRLSDAVHILGEMRRKSCS 323

Query: 463 PDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKL 522
           P  +TY+ I++   +A  L+ A +   E ++  C PN+V++NIMI    K      A++L
Sbjct: 324 PTVYTYNTILDGYCRANQLEEARKFMLEEMD--CPPNVVSFNIMIRGLCKVNRSSEAMEL 381

Query: 523 YRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRK-NWVPDEPVYGLLVDLWG 581
             + +     PD V Y+ V++ L     +DEA  V+ +M  +   +P+   Y  L+    
Sbjct: 382 VEEARRRRCNPDVVMYTTVIDGLCREKKVDEACRVYRKMLEEPGCLPNSITYSTLITGLC 441

Query: 582 KAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGL 636
            AG + +A  + E     G  PN+ T N L+ AF +  +  DA  LL  M+  G 
Sbjct: 442 NAGMLDRARGYIE----KGCVPNIGTYNLLIDAFRKANRDEDARELLDDMVQRGF 492



 Score = 84.3 bits (207), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 79/317 (24%), Positives = 132/317 (41%), Gaps = 23/317 (7%)

Query: 496 CIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAE 555
           C  + VTY  +I    K +  + AL     M + GF PD  TY+ V+  L     L EA 
Sbjct: 7   CSADFVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEAR 66

Query: 556 AVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAF 615
               EM  +N  P+   Y +L+D   K G V +A      M +  + P   T NSL+S  
Sbjct: 67  KFLEEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRKKCV-PTAVTYNSLISGL 125

Query: 616 LRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGFCHELMAVSGHPAHM 675
            +  + S+AY LL+ M+  G  P + TYT L++   +++   D     E +   G    +
Sbjct: 126 CKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDV 185

Query: 676 FLLSMPSPG--PDGQNVRDHVGSFLEMMHSEDRESKRGLVDAVVDFLHKSGLKEEAGSVW 733
              S    G   +G+ +++ +  F  M+ S          ++++    + G  +EA ++ 
Sbjct: 186 VTYSCLIDGLCKEGR-LKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLL 244

Query: 734 EVAAQKNVYPDAVKEKGMSYWLINLHVMSDGTAVIALSRTLAWFRKQMLISGVGPSRIDI 793
           E  A+    PD V    +      L  + D   ++           QM   G+ P   D+
Sbjct: 245 ERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLL----------NQMTRKGLTP---DV 291

Query: 794 VT------GWGRRSRVT 804
           VT      G  R +R++
Sbjct: 292 VTFTSLMDGLCRENRLS 308


>gi|115456691|ref|NP_001051946.1| Os03g0856100 [Oryza sativa Japonica Group]
 gi|41393252|gb|AAS01975.1| putative chloroplastic RNA-binding protein, with alternative
           splicing isoforms [Oryza sativa Japonica Group]
 gi|113550417|dbj|BAF13860.1| Os03g0856100 [Oryza sativa Japonica Group]
 gi|222626198|gb|EEE60330.1| hypothetical protein OsJ_13428 [Oryza sativa Japonica Group]
          Length = 640

 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 126/542 (23%), Positives = 231/542 (42%), Gaps = 27/542 (4%)

Query: 317 ALGNTNYSMDAYQANQVLKQL-------QDHTVALGFFNWLRRQAGFKHDEHTYTTMVGI 369
           AL +  + +D    N  LK L       Q   +AL         +G   D  TY+T++  
Sbjct: 102 ALPDGAFPLDTIVFNVALKSLRAARQWPQAERLALDML-----ASGVPLDNITYSTLITA 156

Query: 370 LGRARQFGAINKLLDQM-VRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEP 428
             R RQF    +  ++M   DG  P+ VTY+ ++  Y +     E L +F + +  G +P
Sbjct: 157 ARRCRQFDKAVEWFERMYASDGVLPDEVTYSAILDVYAQLGMKEEVLALFDRARGSGWKP 216

Query: 429 DRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLF 488
           D V +  L  +  +AG  D    ++K+M+  G+ P+ F Y+ ++  LGK G    A  LF
Sbjct: 217 DHVAFAVLAKMFGEAGDYDGIQFVFKEMREVGIKPNIFVYNALLEALGKTGKPGLARNLF 276

Query: 489 CEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHC 548
            EM  +G  PN  T   +  +  +AR  + AL+L+  M+      D +  + ++ +    
Sbjct: 277 EEMTAEGVEPNARTLTALAKIYGRARWGRDALQLWEQMREKKLPADNILCNTLLSMCADV 336

Query: 549 GYLDEAEAVFAEMRRKNW----VPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPN 604
           G + EAE +F+EM+  +      PD+  Y  +++++G +G+  +A + +  M+++G+ PN
Sbjct: 337 GLVGEAEQLFSEMKDPDLGDVPKPDKWSYTAMINIYGSSGDADRALQLFAEMVESGIEPN 396

Query: 605 VPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGFCHE 664
           + +   ++    + G++ +A  +L+  +  GLKP  +    LLS    +           
Sbjct: 397 IMSYTIVIQCLGKAGRIQEAVDVLEAGMAKGLKPDDRLCGCLLSVVALSSGDETEVILAC 456

Query: 665 LMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRESKRGLVDAVVDFLHKSG 724
           L  V  +   +  +     G     V D       +++S   E +R   + ++D     G
Sbjct: 457 LEKVRSNLVKLIRML----GDARVGVEDLRVELKGILNSAAPEVRRPYCNCLIDICRNHG 512

Query: 725 L-KEEAGSVWEVAAQKNVYPDAVKEKGMSYWLINLHVMSDGTAVIALSRTLAWFRKQMLI 783
              E A  ++ +A    +Y   +  +    W ++L  +S G A  A    +   R+    
Sbjct: 513 YPSERAVELFRLARHYGLY-SKIHTRKEEEWSLDLRSLSVGAAKTAFDDWMKTIREHEEE 571

Query: 784 SGVGPSRIDIVTGWGRRSRVTGTSLVRQAVQELLHMFSFPFFTENGNSGCFVGCGEPLNK 843
             + P    + TG        G +    AV   L     PF   +   G F+   + L  
Sbjct: 572 EAL-PQTFSVYTGSSTHKFAQGLA---TAVASHLEQVGAPFRASDSQLGSFISSRDDLLS 627

Query: 844 WL 845
           WL
Sbjct: 628 WL 629



 Score = 40.8 bits (94), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 48/241 (19%), Positives = 94/241 (39%), Gaps = 5/241 (2%)

Query: 509 LQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVP 568
           L    R   S L   R + +  F  D + +++ ++ L       +AE +  +M       
Sbjct: 86  LHPSWRKSLSLLCWLRALPDGAFPLDTIVFNVALKSLRAARQWPQAERLALDMLASGVPL 145

Query: 569 DEPVYGLLVDLWGKAGNVRKAWEWYEAMLQA-GLRPNVPTCNSLLSAFLRVGQLSDAYHL 627
           D   Y  L+    +     KA EW+E M  + G+ P+  T +++L  + ++G   +   L
Sbjct: 146 DNITYSTLITAARRCRQFDKAVEWFERMYASDGVLPDEVTYSAILDVYAQLGMKEEVLAL 205

Query: 628 LQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGFCHELMAVSGHPAHMFLLS--MPSPGP 685
                  G KP    + +L     EA     + F  + M   G   ++F+ +  + + G 
Sbjct: 206 FDRARGSGWKPDHVAFAVLAKMFGEAGDYDGIQFVFKEMREVGIKPNIFVYNALLEALGK 265

Query: 686 DGQNVRDHVGSFLEMMHSEDRESKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDA 745
            G+       +  E M +E  E     + A+     ++    +A  +WE   +K +  D 
Sbjct: 266 TGKP--GLARNLFEEMTAEGVEPNARTLTALAKIYGRARWGRDALQLWEQMREKKLPADN 323

Query: 746 V 746
           +
Sbjct: 324 I 324


>gi|449448914|ref|XP_004142210.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
           chloroplastic-like [Cucumis sativus]
 gi|449525343|ref|XP_004169677.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
           chloroplastic-like [Cucumis sativus]
          Length = 768

 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 90/294 (30%), Positives = 152/294 (51%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           GF+ D+ TY T+V  L +        +++D M+  G  P++ TYN LI    +   + EA
Sbjct: 303 GFRPDQFTYNTLVNGLCKIGHAKHAMEVVDAMLLGGLDPDIYTYNSLISGLCKLGEIEEA 362

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
           + +  QM    C P+ VTY  +I    K   +D A ++ + + + G+ PD  T++ +I  
Sbjct: 363 VKILDQMVSRDCSPNAVTYNAIISSLCKENRVDEATEIARLLTSKGILPDVCTFNSLIQG 422

Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPD 534
           L  + + ++A  LF EM  +GC P+  TYN++I     +R  + AL L ++M+  G   +
Sbjct: 423 LCLSSNHKSAMDLFEEMKGKGCRPDEFTYNMLIDSLCSSRKLEEALNLLKEMELNGCARN 482

Query: 535 KVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYE 594
            V Y+ +++       ++EAE +F EM  +    D   Y  L+D   K+  V  A +  +
Sbjct: 483 VVIYNTLIDGFCKNKRIEEAEEIFDEMELQGVSRDSVTYNTLIDGLCKSKRVEDAAQLMD 542

Query: 595 AMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
            M+  GLRP+  T NSLL+ F + G +  A  ++Q M + G  P + TY  L+S
Sbjct: 543 QMIMEGLRPDKFTYNSLLTHFCKTGDIKKAADIVQTMTSSGCNPDIVTYATLIS 596



 Score =  133 bits (335), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 86/328 (26%), Positives = 157/328 (47%), Gaps = 2/328 (0%)

Query: 329 QANQVLKQLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVR 388
           Q  + L++  D   AL  FNW  +Q  F      Y  ++  LG+A  F  + ++L++M  
Sbjct: 66  QLIETLRRQTDEVAALRVFNWASKQPNFVPSSSVYEEILRKLGKAGSFEYMRRVLEEMKL 125

Query: 389 DGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQ-VVGCEPDRVTYCTLIDIHAKAGFLD 447
            GC+ +   +   + SYG+    +E + + K M+     +PD   Y  L+++   A  L 
Sbjct: 126 SGCEFDRGIFLIFVESYGKFELYDEVVGIVKVMEDEYRIKPDTRFYNVLLNVLVDANKLK 185

Query: 448 VAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMI 507
           +    +  M    +  D  T++++I  L KA  ++ A  +  EM + G  P+  T+  ++
Sbjct: 186 LVESAHSSMVRRRIRHDVSTFNILIKALCKAHQVRPAILMMEEMPSYGLSPDETTFTTIM 245

Query: 508 ALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWV 567
               +  N   AL++   M   G     VT ++++      G +D+A +   E   + + 
Sbjct: 246 QGYIEGGNLDGALRIKEQMVEYGCPCTDVTVNVLINGFCKQGRIDQALSFIQEAVSEGFR 305

Query: 568 PDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHL 627
           PD+  Y  LV+   K G+ + A E  +AML  GL P++ T NSL+S   ++G++ +A  +
Sbjct: 306 PDQFTYNTLVNGLCKIGHAKHAMEVVDAMLLGGLDPDIYTYNSLISGLCKLGEIEEAVKI 365

Query: 628 LQGMLNLGLKPSLQTYTLLL-SCCTEAR 654
           L  M++    P+  TY  ++ S C E R
Sbjct: 366 LDQMVSRDCSPNAVTYNAIISSLCKENR 393



 Score =  129 bits (324), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 84/275 (30%), Positives = 138/275 (50%), Gaps = 5/275 (1%)

Query: 339 DHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTY 398
           +H  A+  F  ++ + G + DE TY  ++  L  +R+      LL +M  +GC  NVV Y
Sbjct: 428 NHKSAMDLFEEMKGK-GCRPDEFTYNMLIDSLCSSRKLEEALNLLKEMELNGCARNVVIY 486

Query: 399 NRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQA 458
           N LI  + +   + EA ++F +M++ G   D VTY TLID   K+  ++ A  +  +M  
Sbjct: 487 NTLIDGFCKNKRIEEAEEIFDEMELQGVSRDSVTYNTLIDGLCKSKRVEDAAQLMDQMIM 546

Query: 459 AGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQS 518
            GL PD FTY+ ++    K G ++ A  +   M + GC P++VTY  +I+   KA   Q 
Sbjct: 547 EGLRPDKFTYNSLLTHFCKTGDIKKAADIVQTMTSSGCNPDIVTYATLISGLCKAGRVQV 606

Query: 519 ALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLV- 577
           A +L R +Q  G       Y+ V++ L       EA  +F EM  K+  PD   Y ++  
Sbjct: 607 ASRLLRSIQMKGMVLTPHAYNPVIQALFKRNRTHEAMRLFREMLDKSEPPDAITYKIVYR 666

Query: 578 DLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLL 612
            L    G + +A ++   M++ G   N+P  +S +
Sbjct: 667 GLCNGGGPIGEAVDFTVEMIERG---NIPEFSSFV 698



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 86/328 (26%), Positives = 144/328 (43%), Gaps = 35/328 (10%)

Query: 354 AGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNE 413
            G   D +TY +++  L +  +     K+LDQMV   C PN VTYN +I S  + N ++E
Sbjct: 337 GGLDPDIYTYNSLISGLCKLGEIEEAVKILDQMVSRDCSPNAVTYNAIISSLCKENRVDE 396

Query: 414 A-----------------------------------LDVFKQMQVVGCEPDRVTYCTLID 438
           A                                   +D+F++M+  GC PD  TY  LID
Sbjct: 397 ATEIARLLTSKGILPDVCTFNSLIQGLCLSSNHKSAMDLFEEMKGKGCRPDEFTYNMLID 456

Query: 439 IHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIP 498
               +  L+ A+++ K+M+  G + +   Y+ +I+   K   ++ A ++F EM  QG   
Sbjct: 457 SLCSSRKLEEALNLLKEMELNGCARNVVIYNTLIDGFCKNKRIEEAEEIFDEMELQGVSR 516

Query: 499 NLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVF 558
           + VTYN +I    K++  + A +L   M   G  PDK TY+ ++      G + +A  + 
Sbjct: 517 DSVTYNTLIDGLCKSKRVEDAAQLMDQMIMEGLRPDKFTYNSLLTHFCKTGDIKKAADIV 576

Query: 559 AEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRV 618
             M      PD   Y  L+    KAG V+ A     ++   G+       N ++ A  + 
Sbjct: 577 QTMTSSGCNPDIVTYATLISGLCKAGRVQVASRLLRSIQMKGMVLTPHAYNPVIQALFKR 636

Query: 619 GQLSDAYHLLQGMLNLGLKPSLQTYTLL 646
            +  +A  L + ML+    P   TY ++
Sbjct: 637 NRTHEAMRLFREMLDKSEPPDAITYKIV 664



 Score =  124 bits (310), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 89/371 (23%), Positives = 160/371 (43%), Gaps = 72/371 (19%)

Query: 348 NWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGR 407
           + +RR+   +HD  T+  ++  L +A Q      ++++M   G  P+  T+  ++  Y  
Sbjct: 193 SMVRRR--IRHDVSTFNILIKALCKAHQVRPAILMMEEMPSYGLSPDETTFTTIMQGYIE 250

Query: 408 ANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFT 467
              L+ AL + +QM   GC    VT   LI+   K G +D A+   ++  + G  PD FT
Sbjct: 251 GGNLDGALRIKEQMVEYGCPCTDVTVNVLINGFCKQGRIDQALSFIQEAVSEGFRPDQFT 310

Query: 468 YSVIINCLGKAGH-----------------------------------LQAAHQLFCEMV 492
           Y+ ++N L K GH                                   ++ A ++  +MV
Sbjct: 311 YNTLVNGLCKIGHAKHAMEVVDAMLLGGLDPDIYTYNSLISGLCKLGEIEEAVKILDQMV 370

Query: 493 NQGCIPNLVTYNIMIALQAK-----------------------------------ARNYQ 517
           ++ C PN VTYN +I+   K                                   + N++
Sbjct: 371 SRDCSPNAVTYNAIISSLCKENRVDEATEIARLLTSKGILPDVCTFNSLIQGLCLSSNHK 430

Query: 518 SALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLV 577
           SA+ L+ +M+  G  PD+ TY+++++ L     L+EA  +  EM       +  +Y  L+
Sbjct: 431 SAMDLFEEMKGKGCRPDEFTYNMLIDSLCSSRKLEEALNLLKEMELNGCARNVVIYNTLI 490

Query: 578 DLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLK 637
           D + K   + +A E ++ M   G+  +  T N+L+    +  ++ DA  L+  M+  GL+
Sbjct: 491 DGFCKNKRIEEAEEIFDEMELQGVSRDSVTYNTLIDGLCKSKRVEDAAQLMDQMIMEGLR 550

Query: 638 PSLQTYTLLLS 648
           P   TY  LL+
Sbjct: 551 PDKFTYNSLLT 561



 Score =  120 bits (300), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 107/483 (22%), Positives = 203/483 (42%), Gaps = 17/483 (3%)

Query: 336 QLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNV 395
           +L D  V  G    +  +   K D   Y  ++ +L  A +   +      MVR   + +V
Sbjct: 146 ELYDEVV--GIVKVMEDEYRIKPDTRFYNVLLNVLVDANKLKLVESAHSSMVRRRIRHDV 203

Query: 396 VTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKK 455
            T+N LI +  +A+ +  A+ + ++M   G  PD  T+ T++  + + G LD A+ + ++
Sbjct: 204 STFNILIKALCKAHQVRPAILMMEEMPSYGLSPDETTFTTIMQGYIEGGNLDGALRIKEQ 263

Query: 456 MQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARN 515
           M   G      T +V+IN   K G +  A     E V++G  P+  TYN ++    K  +
Sbjct: 264 MVEYGCPCTDVTVNVLINGFCKQGRIDQALSFIQEAVSEGFRPDQFTYNTLVNGLCKIGH 323

Query: 516 YQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGL 575
            + A+++   M   G +PD  TY+ ++  L   G ++EA  +  +M  ++  P+   Y  
Sbjct: 324 AKHAMEVVDAMLLGGLDPDIYTYNSLISGLCKLGEIEEAVKILDQMVSRDCSPNAVTYNA 383

Query: 576 LVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLG 635
           ++    K   V +A E    +   G+ P+V T NSL+           A  L + M   G
Sbjct: 384 IISSLCKENRVDEATEIARLLTSKGILPDVCTFNSLIQGLCLSSNHKSAMDLFEEMKGKG 443

Query: 636 LKPSLQTYTLLL-SCCTEARSPYDMGFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHV 694
            +P   TY +L+ S C+  +    +    E M ++G   ++ + +    G       +  
Sbjct: 444 CRPDEFTYNMLIDSLCSSRKLEEALNLLKE-MELNGCARNVVIYNTLIDGFCKNKRIEEA 502

Query: 695 GSFLEMMHSEDRESKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAVKEKGMSYW 754
               + M  +         + ++D L KS   E+A  + +    + + PD       +Y 
Sbjct: 503 EEIFDEMELQGVSRDSVTYNTLIDGLCKSKRVEDAAQLMDQMIMEGLRPDK-----FTYN 557

Query: 755 LINLHVMSDGTAVIALSRTLAWFRKQMLISGVGPSRI---DIVTGWGRRSRVTGTSLVRQ 811
            +  H    G       +  A   + M  SG  P  +    +++G  +  RV   S + +
Sbjct: 558 SLLTHFCKTGDI-----KKAADIVQTMTSSGCNPDIVTYATLISGLCKAGRVQVASRLLR 612

Query: 812 AVQ 814
           ++Q
Sbjct: 613 SIQ 615



 Score =  116 bits (290), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 76/293 (25%), Positives = 139/293 (47%), Gaps = 1/293 (0%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           G   D  T+ +++  L  +    +   L ++M   GC+P+  TYN LI S   +  L EA
Sbjct: 408 GILPDVCTFNSLIQGLCLSSNHKSAMDLFEEMKGKGCRPDEFTYNMLIDSLCSSRKLEEA 467

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
           L++ K+M++ GC  + V Y TLID   K   ++ A +++ +M+  G+S D+ TY+ +I+ 
Sbjct: 468 LNLLKEMELNGCARNVVIYNTLIDGFCKNKRIEEAEEIFDEMELQGVSRDSVTYNTLIDG 527

Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPD 534
           L K+  ++ A QL  +M+ +G  P+  TYN ++    K  + + A  + + M ++G  PD
Sbjct: 528 LCKSKRVEDAAQLMDQMIMEGLRPDKFTYNSLLTHFCKTGDIKKAADIVQTMTSSGCNPD 587

Query: 535 KVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYE 594
            VTY+ ++  L   G +  A  +   ++ K  V     Y  ++    K     +A   + 
Sbjct: 588 IVTYATLISGLCKAGRVQVASRLLRSIQMKGMVLTPHAYNPVIQALFKRNRTHEAMRLFR 647

Query: 595 AMLQAGLRPNVPTCNSLLSAFLR-VGQLSDAYHLLQGMLNLGLKPSLQTYTLL 646
            ML     P+  T   +        G + +A      M+  G  P   ++ +L
Sbjct: 648 EMLDKSEPPDAITYKIVYRGLCNGGGPIGEAVDFTVEMIERGNIPEFSSFVML 700


>gi|302770561|ref|XP_002968699.1| hypothetical protein SELMODRAFT_61973 [Selaginella moellendorffii]
 gi|300163204|gb|EFJ29815.1| hypothetical protein SELMODRAFT_61973 [Selaginella moellendorffii]
          Length = 544

 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 91/296 (30%), Positives = 149/296 (50%), Gaps = 5/296 (1%)

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
           +AG++ +  TY+ ++    +  +     ++  +M+   C PN VT+N LI  + +A  L 
Sbjct: 236 KAGYEPNVFTYSIIINCYCKLDKVEEAWEVFMKMIESNCVPNAVTFNTLIAGFCKAGMLE 295

Query: 413 EALDVFKQMQVVGCEPDRVTYCTLID-IHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
           +A+ +F +M+ +GC+   VTY TLID +  K G +  A+D++ K++ AGL+P   TY+ +
Sbjct: 296 DAIKLFAEMEKIGCKATIVTYNTLIDSLCKKRGGVYTAVDLFNKLEGAGLTPTIVTYNSL 355

Query: 472 INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF 531
           I     A  L  A Q F EM  + C PN++TY+I+I    K R  + A K   DM+  G+
Sbjct: 356 IQGFCDARRLSEAMQYFDEMEGK-CAPNVITYSILIDGLCKVRRMKEAAKTLEDMKAHGY 414

Query: 532 EPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWE 591
            P  VTY  ++     CG L  A   F +M+     P+  ++  L+D   KA        
Sbjct: 415 TPTVVTYGGLINGFCKCGELKSALLFFEKMKLAGCAPNTVIFNTLIDGLCKAERANDGLR 474

Query: 592 WYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
               M   G +P+V T N L+S      ++ DA  L  GM      P++ T+  L+
Sbjct: 475 LLCHMHAEGCKPDVITYNCLISGLCSANRVEDAQRLFDGM---ACAPNVTTFNFLI 527



 Score =  143 bits (360), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 87/291 (29%), Positives = 148/291 (50%), Gaps = 2/291 (0%)

Query: 359 DEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVF 418
           D  TY  ++    +  Q      L+ ++++ G +PNV TY+ +I+ Y + + + EA +VF
Sbjct: 207 DIMTYNVLMDGYCKIGQTYEAQSLMKEILKAGYEPNVFTYSIIINCYCKLDKVEEAWEVF 266

Query: 419 KQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKA 478
            +M    C P+ VT+ TLI    KAG L+ A+ ++ +M+  G      TY+ +I+ L K 
Sbjct: 267 MKMIESNCVPNAVTFNTLIAGFCKAGMLEDAIKLFAEMEKIGCKATIVTYNTLIDSLCKK 326

Query: 479 -GHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVT 537
            G +  A  LF ++   G  P +VTYN +I     AR    A++ + +M+     P+ +T
Sbjct: 327 RGGVYTAVDLFNKLEGAGLTPTIVTYNSLIQGFCDARRLSEAMQYFDEMEGKC-APNVIT 385

Query: 538 YSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAML 597
           YSI+++ L     + EA     +M+   + P    YG L++ + K G ++ A  ++E M 
Sbjct: 386 YSILIDGLCKVRRMKEAAKTLEDMKAHGYTPTVVTYGGLINGFCKCGELKSALLFFEKMK 445

Query: 598 QAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
            AG  PN    N+L+    +  + +D   LL  M   G KP + TY  L+S
Sbjct: 446 LAGCAPNTVIFNTLIDGLCKAERANDGLRLLCHMHAEGCKPDVITYNCLIS 496



 Score =  130 bits (326), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 89/315 (28%), Positives = 151/315 (47%), Gaps = 7/315 (2%)

Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLI 402
           A+ FF  ++  +G + D  +Y  ++  L  + +    + L   M    C P+++TYN L+
Sbjct: 160 AMEFFKEMK-ASGVEPDLESYHILLSALSDSGRMAEAHALFSAMT---CSPDIMTYNVLM 215

Query: 403 HSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLS 462
             Y +     EA  + K++   G EP+  TY  +I+ + K   ++ A +++ KM  +   
Sbjct: 216 DGYCKIGQTYEAQSLMKEILKAGYEPNVFTYSIIINCYCKLDKVEEAWEVFMKMIESNCV 275

Query: 463 PDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARN-YQSALK 521
           P+  T++ +I    KAG L+ A +LF EM   GC   +VTYN +I    K R    +A+ 
Sbjct: 276 PNAVTFNTLIAGFCKAGMLEDAIKLFAEMEKIGCKATIVTYNTLIDSLCKKRGGVYTAVD 335

Query: 522 LYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWG 581
           L+  ++ AG  P  VTY+ +++       L EA   F EM  K   P+   Y +L+D   
Sbjct: 336 LFNKLEGAGLTPTIVTYNSLIQGFCDARRLSEAMQYFDEMEGK-CAPNVITYSILIDGLC 394

Query: 582 KAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQ 641
           K   +++A +  E M   G  P V T   L++ F + G+L  A    + M   G  P+  
Sbjct: 395 KVRRMKEAAKTLEDMKAHGYTPTVVTYGGLINGFCKCGELKSALLFFEKMKLAGCAPNTV 454

Query: 642 TY-TLLLSCCTEARS 655
            + TL+   C   R+
Sbjct: 455 IFNTLIDGLCKAERA 469



 Score =  126 bits (317), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 99/372 (26%), Positives = 180/372 (48%), Gaps = 32/372 (8%)

Query: 298 VESVSRILRQWKWGPLAEEALGNTNYSMDAYQANQV---LKQLQD-----HTVALGFFNW 349
           + S  ++ R+ + GP    +  +       + A +V   L  LQD      +VA G +N 
Sbjct: 83  MSSALKLFREMQAGPFLPTSASHNILLRGFFMAGRVRDALAHLQDMRKSSSSVATGTYNL 142

Query: 350 LRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRAN 409
           + +   +++           L +A +F        +M   G +P++ +Y+ L+ +   + 
Sbjct: 143 VLKGLCWENKSANR------LEQAMEF------FKEMKASGVEPDLESYHILLSALSDSG 190

Query: 410 YLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYS 469
            + EA  +F  M    C PD +TY  L+D + K G    A  + K++  AG  P+ FTYS
Sbjct: 191 RMAEAHALFSAMT---CSPDIMTYNVLMDGYCKIGQTYEAQSLMKEILKAGYEPNVFTYS 247

Query: 470 VIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNA 529
           +IINC  K   ++ A ++F +M+   C+PN VT+N +IA   KA   + A+KL+ +M+  
Sbjct: 248 IIINCYCKLDKVEEAWEVFMKMIESNCVPNAVTFNTLIAGFCKAGMLEDAIKLFAEMEKI 307

Query: 530 GFEPDKVTYSIVMEVLGHC---GYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNV 586
           G +   VTY+ +++ L  C   G +  A  +F ++      P    Y  L+  +  A  +
Sbjct: 308 GCKATIVTYNTLIDSL--CKKRGGVYTAVDLFNKLEGAGLTPTIVTYNSLIQGFCDARRL 365

Query: 587 RKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLL 646
            +A ++++ M +    PNV T + L+    +V ++ +A   L+ M   G  P++ TY  L
Sbjct: 366 SEAMQYFDEM-EGKCAPNVITYSILIDGLCKVRRMKEAAKTLEDMKAHGYTPTVVTYGGL 424

Query: 647 LS--C-CTEARS 655
           ++  C C E +S
Sbjct: 425 INGFCKCGELKS 436



 Score =  116 bits (291), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 82/309 (26%), Positives = 149/309 (48%), Gaps = 12/309 (3%)

Query: 356 FKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEAL 415
           F  + HTY  ++    +  Q      +   M   G  PN  T N L+        ++ AL
Sbjct: 28  FAPNAHTYNVLIRGFCKGGQMHQAVSVFSDMKSSGLLPNASTMNTLLLGLCEIGQMSSAL 87

Query: 416 DVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCL 475
            +F++MQ     P   ++  L+     AG +  A+   + M+ +  S  T TY++++  L
Sbjct: 88  KLFREMQAGPFLPTSASHNILLRGFFMAGRVRDALAHLQDMRKSSSSVATGTYNLVLKGL 147

Query: 476 ----GKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF 531
                 A  L+ A + F EM   G  P+L +Y+I+++  + +     A  L+  M  +  
Sbjct: 148 CWENKSANRLEQAMEFFKEMKASGVEPDLESYHILLSALSDSGRMAEAHALFSAMTCS-- 205

Query: 532 EPDKVTYSIVMEVLGHC--GYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKA 589
            PD +TY+++M+  G+C  G   EA+++  E+ +  + P+   Y ++++ + K   V +A
Sbjct: 206 -PDIMTYNVLMD--GYCKIGQTYEAQSLMKEILKAGYEPNVFTYSIIINCYCKLDKVEEA 262

Query: 590 WEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTY-TLLLS 648
           WE +  M+++   PN  T N+L++ F + G L DA  L   M  +G K ++ TY TL+ S
Sbjct: 263 WEVFMKMIESNCVPNAVTFNTLIAGFCKAGMLEDAIKLFAEMEKIGCKATIVTYNTLIDS 322

Query: 649 CCTEARSPY 657
            C +    Y
Sbjct: 323 LCKKRGGVY 331



 Score = 97.4 bits (241), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 64/216 (29%), Positives = 106/216 (49%), Gaps = 5/216 (2%)

Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLI 402
           A+  FN L   AG      TY +++     AR+     +  D+M    C PNV+TY+ LI
Sbjct: 333 AVDLFNKLE-GAGLTPTIVTYNSLIQGFCDARRLSEAMQYFDEM-EGKCAPNVITYSILI 390

Query: 403 HSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLS 462
               +   + EA    + M+  G  P  VTY  LI+   K G L  A+  ++KM+ AG +
Sbjct: 391 DGLCKVRRMKEAAKTLEDMKAHGYTPTVVTYGGLINGFCKCGELKSALLFFEKMKLAGCA 450

Query: 463 PDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKL 522
           P+T  ++ +I+ L KA       +L C M  +GC P+++TYN +I+    A   + A +L
Sbjct: 451 PNTVIFNTLIDGLCKAERANDGLRLLCHMHAEGCKPDVITYNCLISGLCSANRVEDAQRL 510

Query: 523 YRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVF 558
           +  M  A   P+  T++ ++  L     ++EA  + 
Sbjct: 511 FDGMACA---PNVTTFNFLIRGLCAQKKVEEARNIL 543



 Score = 89.7 bits (221), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 59/242 (24%), Positives = 112/242 (46%), Gaps = 42/242 (17%)

Query: 447 DVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIM 506
           D A+ ++K++ A   +P+  TY+V+I    K G +  A  +F +M + G +PN  T N +
Sbjct: 14  DQALRLFKEVLAGLFAPNAHTYNVLIRGFCKGGQMHQAVSVFSDMKSSGLLPNASTMNTL 73

Query: 507 IALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVM----------EVLGH--------- 547
           +    +     SALKL+R+MQ   F P   +++I++          + L H         
Sbjct: 74  LLGLCEIGQMSSALKLFREMQAGPFLPTSASHNILLRGFFMAGRVRDALAHLQDMRKSSS 133

Query: 548 --------------------CGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVR 587
                                  L++A   F EM+     PD   Y +L+     +G + 
Sbjct: 134 SVATGTYNLVLKGLCWENKSANRLEQAMEFFKEMKASGVEPDLESYHILLSALSDSGRMA 193

Query: 588 KAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
           +A   + AM  +   P++ T N L+  + ++GQ  +A  L++ +L  G +P++ TY++++
Sbjct: 194 EAHALFSAMTCS---PDIMTYNVLMDGYCKIGQTYEAQSLMKEILKAGYEPNVFTYSIII 250

Query: 648 SC 649
           +C
Sbjct: 251 NC 252


>gi|18397002|ref|NP_566237.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75207286|sp|Q9SR00.1|PP213_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At3g04760, chloroplastic; Flags: Precursor
 gi|6175176|gb|AAF04902.1|AC011437_17 hypothetical protein [Arabidopsis thaliana]
 gi|15810359|gb|AAL07067.1| unknown protein [Arabidopsis thaliana]
 gi|22136960|gb|AAM91709.1| unknown protein [Arabidopsis thaliana]
 gi|332640611|gb|AEE74132.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 602

 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 91/323 (28%), Positives = 152/323 (47%), Gaps = 1/323 (0%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           R   F  D  TY  M+G L    +     K+L+Q++ D CQP V+TY  LI +      +
Sbjct: 185 RSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGV 244

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
           +EAL +  +M   G +PD  TY T+I    K G +D A +M + ++  G  PD  +Y+++
Sbjct: 245 DEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNIL 304

Query: 472 INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF 531
           +  L   G  +   +L  +M ++ C PN+VTY+I+I    +    + A+ L + M+  G 
Sbjct: 305 LRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGL 364

Query: 532 EPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWE 591
            PD  +Y  ++      G LD A      M     +PD   Y  ++    K G   +A E
Sbjct: 365 TPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALE 424

Query: 592 WYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSC-C 650
            +  + + G  PN  + N++ SA    G    A H++  M++ G+ P   TY  ++SC C
Sbjct: 425 IFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLC 484

Query: 651 TEARSPYDMGFCHELMAVSGHPA 673
            E           ++ +   HP+
Sbjct: 485 REGMVDEAFELLVDMRSCEFHPS 507



 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 86/297 (28%), Positives = 150/297 (50%), Gaps = 8/297 (2%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRD----GCQPNVVTYNRLIHSYGRANY 410
           G K D  TY T+  I G  ++ G +++   +MVR+    GC+P+V++YN L+ +      
Sbjct: 258 GLKPDMFTYNTI--IRGMCKE-GMVDRAF-EMVRNLELKGCEPDVISYNILLRALLNQGK 313

Query: 411 LNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSV 470
             E   +  +M    C+P+ VTY  LI    + G ++ AM++ K M+  GL+PD ++Y  
Sbjct: 314 WEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDP 373

Query: 471 IINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAG 530
           +I    + G L  A +    M++ GC+P++V YN ++A   K      AL+++  +   G
Sbjct: 374 LIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVG 433

Query: 531 FEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAW 590
             P+  +Y+ +   L   G    A  +  EM      PDE  Y  ++    + G V +A+
Sbjct: 434 CSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAF 493

Query: 591 EWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
           E    M      P+V T N +L  F +  ++ DA ++L+ M+  G +P+  TYT+L+
Sbjct: 494 ELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLI 550



 Score =  139 bits (350), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 79/290 (27%), Positives = 141/290 (48%)

Query: 359 DEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVF 418
           D   Y  ++    +  +     ++LD+M      P+ VTYN +I S      L+ AL V 
Sbjct: 157 DVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVL 216

Query: 419 KQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKA 478
            Q+    C+P  +TY  LI+     G +D A+ +  +M + GL PD FTY+ II  + K 
Sbjct: 217 NQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKE 276

Query: 479 GHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTY 538
           G +  A ++   +  +GC P++++YNI++        ++   KL   M +   +P+ VTY
Sbjct: 277 GMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTY 336

Query: 539 SIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQ 598
           SI++  L   G ++EA  +   M+ K   PD   Y  L+  + + G +  A E+ E M+ 
Sbjct: 337 SILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMIS 396

Query: 599 AGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
            G  P++   N++L+   + G+   A  +   +  +G  P+  +Y  + S
Sbjct: 397 DGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFS 446



 Score =  132 bits (333), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 84/311 (27%), Positives = 150/311 (48%), Gaps = 2/311 (0%)

Query: 326 DAYQANQVLKQLQDHTVALGFFNWLR--RQAGFKHDEHTYTTMVGILGRARQFGAINKLL 383
           D +  N +++ +    +    F  +R     G + D  +Y  ++  L    ++    KL+
Sbjct: 262 DMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLM 321

Query: 384 DQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKA 443
            +M  + C PNVVTY+ LI +  R   + EA+++ K M+  G  PD  +Y  LI    + 
Sbjct: 322 TKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCRE 381

Query: 444 GFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTY 503
           G LDVA++  + M + G  PD   Y+ ++  L K G    A ++F ++   GC PN  +Y
Sbjct: 382 GRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSY 441

Query: 504 NIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRR 563
           N M +    + +   AL +  +M + G +PD++TY+ ++  L   G +DEA  +  +MR 
Sbjct: 442 NTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRS 501

Query: 564 KNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSD 623
             + P    Y +++  + KA  +  A    E+M+  G RPN  T   L+      G  ++
Sbjct: 502 CEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAE 561

Query: 624 AYHLLQGMLNL 634
           A  L   ++ +
Sbjct: 562 AMELANDLVRI 572


>gi|242064536|ref|XP_002453557.1| hypothetical protein SORBIDRAFT_04g008050 [Sorghum bicolor]
 gi|241933388|gb|EES06533.1| hypothetical protein SORBIDRAFT_04g008050 [Sorghum bicolor]
          Length = 390

 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 73/189 (38%), Positives = 113/189 (59%)

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
           + G   D   Y  +   LG+ +Q   ++ L D+M  +G  P+V TYN +I S+GR   ++
Sbjct: 175 EKGITTDVGMYNIIFSALGKLKQVSFMSSLYDKMKANGVAPDVFTYNIMISSFGRVGLVD 234

Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
           +A ++F++M    C+PD +TY ++I+   K G LD A  ++K MQ  G  PD FTYS++I
Sbjct: 235 KASELFEEMDDSSCKPDVITYNSMINCLGKNGDLDEAHMLFKDMQEKGYDPDVFTYSILI 294

Query: 473 NCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFE 532
            C GK+  +  A  LF EM+ QGC+PN+VTYNI++    +    + A KLY  ++  G  
Sbjct: 295 ECFGKSNKVDMACSLFDEMIAQGCVPNIVTYNILLDCLERHGKTREAHKLYETLKQQGLA 354

Query: 533 PDKVTYSIV 541
           PD +TYSI+
Sbjct: 355 PDSITYSIL 363



 Score =  140 bits (353), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 83/288 (28%), Positives = 150/288 (52%), Gaps = 3/288 (1%)

Query: 359 DEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVF 418
           ++ TY+ M+ +L    Q   +N++LD  +  G   N   Y+ L+ +  ++ + +EA  VF
Sbjct: 79  NQFTYSIMLDVLATGGQLHRLNEILD--ICSG-HLNRSVYSYLVKALCKSGHASEAHSVF 135

Query: 419 KQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKA 478
            +M     + DR  + ++++    A     A+D+   M   G++ D   Y++I + LGK 
Sbjct: 136 CRMWSSHEKGDRDAFVSMLEALCNAEKTAEAIDLLHMMPEKGITTDVGMYNIIFSALGKL 195

Query: 479 GHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTY 538
             +     L+ +M   G  P++ TYNIMI+   +      A +L+ +M ++  +PD +TY
Sbjct: 196 KQVSFMSSLYDKMKANGVAPDVFTYNIMISSFGRVGLVDKASELFEEMDDSSCKPDVITY 255

Query: 539 SIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQ 598
           + ++  LG  G LDEA  +F +M+ K + PD   Y +L++ +GK+  V  A   ++ M+ 
Sbjct: 256 NSMINCLGKNGDLDEAHMLFKDMQEKGYDPDVFTYSILIECFGKSNKVDMACSLFDEMIA 315

Query: 599 AGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLL 646
            G  PN+ T N LL    R G+  +A+ L + +   GL P   TY++L
Sbjct: 316 QGCVPNIVTYNILLDCLERHGKTREAHKLYETLKQQGLAPDSITYSIL 363



 Score =  134 bits (336), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 77/298 (25%), Positives = 144/298 (48%), Gaps = 3/298 (1%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           +Q     D +TYT ++ + G+A +       L++MV  GC  N++ YN +I + G+   +
Sbjct: 2   KQNNCDPDAYTYTILIRMSGKAGKATKFVSFLEEMVSKGCVLNLIAYNTVIEALGKNKMV 61

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
           ++A+ +  +M    C+P++ TY  ++D+ A  G L    ++   +       +   YS +
Sbjct: 62  DKAIFMLSKMIESDCQPNQFTYSIMLDVLATGGQLHRLNEI---LDICSGHLNRSVYSYL 118

Query: 472 INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF 531
           +  L K+GH   AH +FC M +     +   +  M+     A     A+ L   M   G 
Sbjct: 119 VKALCKSGHASEAHSVFCRMWSSHEKGDRDAFVSMLEALCNAEKTAEAIDLLHMMPEKGI 178

Query: 532 EPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWE 591
             D   Y+I+   LG    +    +++ +M+     PD   Y +++  +G+ G V KA E
Sbjct: 179 TTDVGMYNIIFSALGKLKQVSFMSSLYDKMKANGVAPDVFTYNIMISSFGRVGLVDKASE 238

Query: 592 WYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSC 649
            +E M  +  +P+V T NS+++   + G L +A+ L + M   G  P + TY++L+ C
Sbjct: 239 LFEEMDDSSCKPDVITYNSMINCLGKNGDLDEAHMLFKDMQEKGYDPDVFTYSILIEC 296



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 66/227 (29%), Positives = 114/227 (50%)

Query: 357 KHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALD 416
           K D   + +M+  L  A +      LL  M   G   +V  YN +  + G+   ++    
Sbjct: 144 KGDRDAFVSMLEALCNAEKTAEAIDLLHMMPEKGITTDVGMYNIIFSALGKLKQVSFMSS 203

Query: 417 VFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLG 476
           ++ +M+  G  PD  TY  +I    + G +D A +++++M  +   PD  TY+ +INCLG
Sbjct: 204 LYDKMKANGVAPDVFTYNIMISSFGRVGLVDKASELFEEMDDSSCKPDVITYNSMINCLG 263

Query: 477 KAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKV 536
           K G L  AH LF +M  +G  P++ TY+I+I    K+     A  L+ +M   G  P+ V
Sbjct: 264 KNGDLDEAHMLFKDMQEKGYDPDVFTYSILIECFGKSNKVDMACSLFDEMIAQGCVPNIV 323

Query: 537 TYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKA 583
           TY+I+++ L   G   EA  ++  ++++   PD   Y +L  L  ++
Sbjct: 324 TYNILLDCLERHGKTREAHKLYETLKQQGLAPDSITYSILERLESRS 370



 Score =  111 bits (278), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 53/160 (33%), Positives = 94/160 (58%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           G   D  TY  M+   GR       ++L ++M    C+P+V+TYN +I+  G+   L+EA
Sbjct: 212 GVAPDVFTYNIMISSFGRVGLVDKASELFEEMDDSSCKPDVITYNSMINCLGKNGDLDEA 271

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
             +FK MQ  G +PD  TY  LI+   K+  +D+A  ++ +M A G  P+  TY+++++C
Sbjct: 272 HMLFKDMQEKGYDPDVFTYSILIECFGKSNKVDMACSLFDEMIAQGCVPNIVTYNILLDC 331

Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKAR 514
           L + G  + AH+L+  +  QG  P+ +TY+I+  L+++++
Sbjct: 332 LERHGKTREAHKLYETLKQQGLAPDSITYSILERLESRSQ 371



 Score = 94.7 bits (234), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 91/390 (23%), Positives = 151/390 (38%), Gaps = 74/390 (18%)

Query: 456 MQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARN 515
           M+     PD +TY+++I   GKAG          EMV++GC+ NL+ YN +I    K + 
Sbjct: 1   MKQNNCDPDAYTYTILIRMSGKAGKATKFVSFLEEMVSKGCVLNLIAYNTVIEALGKNKM 60

Query: 516 YQSALKLYRDMQNAGFEPDKVTYSIVMEVL-----------------GHC---------- 548
              A+ +   M  +  +P++ TYSI+++VL                 GH           
Sbjct: 61  VDKAIFMLSKMIESDCQPNQFTYSIMLDVLATGGQLHRLNEILDICSGHLNRSVYSYLVK 120

Query: 549 -----GYLDEAEAVFAEM-----------------------------------RRKNWVP 568
                G+  EA +VF  M                                     K    
Sbjct: 121 ALCKSGHASEAHSVFCRMWSSHEKGDRDAFVSMLEALCNAEKTAEAIDLLHMMPEKGITT 180

Query: 569 DEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLL 628
           D  +Y ++    GK   V      Y+ M   G+ P+V T N ++S+F RVG +  A  L 
Sbjct: 181 DVGMYNIIFSALGKLKQVSFMSSLYDKMKANGVAPDVFTYNIMISSFGRVGLVDKASELF 240

Query: 629 QGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGFCHELMAVSGHPAHMFLLSMPSPGPDGQ 688
           + M +   KP + TY  +++C  +     +     + M   G+   +F  S+        
Sbjct: 241 EEMDDSSCKPDVITYNSMINCLGKNGDLDEAHMLFKDMQEKGYDPDVFTYSILIECFGKS 300

Query: 689 NVRDHVGSFLEMMHSEDRESKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAVKE 748
           N  D   S  + M ++         + ++D L + G   EA  ++E   Q+ + PD++  
Sbjct: 301 NKVDMACSLFDEMIAQGCVPNIVTYNILLDCLERHGKTREAHKLYETLKQQGLAPDSI-- 358

Query: 749 KGMSYWLIN-LHVMSDGTAVI-ALSRTLAW 776
              +Y ++  L   S  TA I   SRT  W
Sbjct: 359 ---TYSILERLESRSQRTARIRKPSRTTGW 385



 Score = 59.3 bits (142), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 26/85 (30%), Positives = 45/85 (52%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           ++ G+  D  TY+ ++   G++ +      L D+M+  GC PN+VTYN L+    R    
Sbjct: 279 QEKGYDPDVFTYSILIECFGKSNKVDMACSLFDEMIAQGCVPNIVTYNILLDCLERHGKT 338

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTL 436
            EA  +++ ++  G  PD +TY  L
Sbjct: 339 REAHKLYETLKQQGLAPDSITYSIL 363


>gi|302795346|ref|XP_002979436.1| hypothetical protein SELMODRAFT_177686 [Selaginella moellendorffii]
 gi|300152684|gb|EFJ19325.1| hypothetical protein SELMODRAFT_177686 [Selaginella moellendorffii]
          Length = 500

 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 99/298 (33%), Positives = 155/298 (52%), Gaps = 3/298 (1%)

Query: 359 DEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVF 418
           D  TYT+++  L + ++       L +MV  G  P+V TY  +IH+    N L+EA    
Sbjct: 10  DFVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEARKFL 69

Query: 419 KQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKA 478
           ++M      P+ VTY  LID   K G +D A+ +  KM+   + P   TY+ +I+ L KA
Sbjct: 70  EEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRKKCV-PTAVTYNSLISGLCKA 128

Query: 479 GHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTY 538
                A+ L  EMV  GCIP++ TY  +I    K++    AL+++  +   GF PD VTY
Sbjct: 129 ERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVTY 188

Query: 539 SIVMEVLGHCGYLDEAEAVFAEM-RRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAML 597
           S +++ L   G L EA  +F  M +  + +P+   Y  L+  + + G + +A    E M 
Sbjct: 189 SCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMA 248

Query: 598 QAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS-CCTEAR 654
           + G  P+V T  +L++ F ++ +L DAY LL  M   GL P + T+T L+   C E R
Sbjct: 249 ETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCRENR 306



 Score =  145 bits (365), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 95/305 (31%), Positives = 145/305 (47%), Gaps = 5/305 (1%)

Query: 362 TYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQM 421
           TYT ++  L +  +      LL +M R  C P  VTYN LI    +A   +EA D+ ++M
Sbjct: 83  TYTVLIDGLCKGGRVDEAVALLSKM-RKKCVPTAVTYNSLISGLCKAERASEAYDLLEEM 141

Query: 422 QVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHL 481
              GC PD  TY TLI    K+   D A+ +++++ A G  PD  TYS +I+ L K G L
Sbjct: 142 VYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVTYSCLIDGLCKEGRL 201

Query: 482 QAAHQLFCEMVNQG-CIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSI 540
           + A  LF  M+  G C+PN VTYN +I+   +      A+ L   M   G  PD VTY+ 
Sbjct: 202 KEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMAETGSSPDVVTYTT 261

Query: 541 VMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAG 600
           +M        LD+A  +  +M RK   PD   +  L+D   +   +  A      M +  
Sbjct: 262 LMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCRENRLSDAVHILGEMRRKS 321

Query: 601 LRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL-SCCTEARSPYDM 659
             P V T N++L  + R  QL +A   +  +  +   P++ ++ +++   C   RS   M
Sbjct: 322 CSPTVYTYNTILDGYCRANQLEEARKFM--LEEMDCPPNVVSFNIMIRGLCKVNRSSEAM 379

Query: 660 GFCHE 664
               E
Sbjct: 380 ELVEE 384



 Score =  140 bits (353), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 94/308 (30%), Positives = 155/308 (50%), Gaps = 11/308 (3%)

Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMV-GILGRARQFGAINKLLDQMVRDG-CQPNVVTYNR 400
           AL  F  L  + GF+ D  TY+ ++ G+    R   AI+ L  +M++ G C PN VTYN 
Sbjct: 169 ALRVFEQLVAR-GFRPDVVTYSCLIDGLCKEGRLKEAID-LFGRMIKSGSCMPNTVTYNS 226

Query: 401 LIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAG 460
           LI  + R   ++EA+++ ++M   G  PD VTY TL++   K   LD A D+  +M   G
Sbjct: 227 LISGFCRMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKG 286

Query: 461 LSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSAL 520
           L+PD  T++ +++ L +   L  A  +  EM  + C P + TYN ++    +A   + A 
Sbjct: 287 LTPDVVTFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRANQLEEAR 346

Query: 521 KLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLW 580
           K    ++     P+ V+++I++  L       EA  +  E RR+   PD  +Y  ++D  
Sbjct: 347 KFM--LEEMDCPPNVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDGL 404

Query: 581 GKAGNVRKAWEWYEAMLQA-GLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPS 639
            +   V +A   Y  ML+  G  PN  T ++L++     G L  A    +G +  G  P+
Sbjct: 405 CREKKVDEACRVYRKMLEEPGCLPNSITYSTLVTGLCNAGMLDRA----RGYIEKGCVPN 460

Query: 640 LQTYTLLL 647
           + TY LL+
Sbjct: 461 IGTYNLLI 468



 Score =  132 bits (332), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 87/275 (31%), Positives = 136/275 (49%), Gaps = 5/275 (1%)

Query: 389 DGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDV 448
           + C  + VTY  LI    +   L +AL    +M   G  PD  TY  +I        L  
Sbjct: 5   NSCSADFVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHE 64

Query: 449 AMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIA 508
           A    ++M    L+P+  TY+V+I+ L K G +  A  L  +M  + C+P  VTYN +I+
Sbjct: 65  ARKFLEEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKM-RKKCVPTAVTYNSLIS 123

Query: 509 LQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVP 568
              KA     A  L  +M  +G  PD  TY+ ++         D+A  VF ++  + + P
Sbjct: 124 GLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRP 183

Query: 569 DEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAG-LRPNVPTCNSLLSAFLRVGQLSDAYHL 627
           D   Y  L+D   K G +++A + +  M+++G   PN  T NSL+S F R+G++ +A +L
Sbjct: 184 DVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNL 243

Query: 628 LQGMLNLGLKPSLQTYTLLLS-CCTEAR--SPYDM 659
           L+ M   G  P + TYT L++  C  AR    YD+
Sbjct: 244 LERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDL 278



 Score =  124 bits (310), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 83/295 (28%), Positives = 142/295 (48%), Gaps = 7/295 (2%)

Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLI 402
           A+  F  + +      +  TY +++    R  +      LL++M   G  P+VVTY  L+
Sbjct: 204 AIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMAETGSSPDVVTYTTLM 263

Query: 403 HSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLS 462
           + + +   L++A D+  QM   G  PD VT+ +L+D   +   L  A+ +  +M+    S
Sbjct: 264 NGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCRENRLSDAVHILGEMRRKSCS 323

Query: 463 PDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKL 522
           P  +TY+ I++   +A  L+ A +   E ++  C PN+V++NIMI    K      A++L
Sbjct: 324 PTVYTYNTILDGYCRANQLEEARKFMLEEMD--CPPNVVSFNIMIRGLCKVNRSSEAMEL 381

Query: 523 YRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRK-NWVPDEPVYGLLVDLWG 581
             + +     PD V Y+ V++ L     +DEA  V+ +M  +   +P+   Y  LV    
Sbjct: 382 VEEARRRRCNPDVVMYTTVIDGLCREKKVDEACRVYRKMLEEPGCLPNSITYSTLVTGLC 441

Query: 582 KAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGL 636
            AG + +A  + E     G  PN+ T N L+ AF +  +  DA  LL  M+  G 
Sbjct: 442 NAGMLDRARGYIE----KGCVPNIGTYNLLIDAFRKANRDEDARELLDDMVQRGF 492



 Score = 84.3 bits (207), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 79/317 (24%), Positives = 132/317 (41%), Gaps = 23/317 (7%)

Query: 496 CIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAE 555
           C  + VTY  +I    K +  + AL     M + GF PD  TY+ V+  L     L EA 
Sbjct: 7   CSADFVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEAR 66

Query: 556 AVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAF 615
               EM  +N  P+   Y +L+D   K G V +A      M +  + P   T NSL+S  
Sbjct: 67  KFLEEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRKKCV-PTAVTYNSLISGL 125

Query: 616 LRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGFCHELMAVSGHPAHM 675
            +  + S+AY LL+ M+  G  P + TYT L++   +++   D     E +   G    +
Sbjct: 126 CKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDV 185

Query: 676 FLLSMPSPG--PDGQNVRDHVGSFLEMMHSEDRESKRGLVDAVVDFLHKSGLKEEAGSVW 733
              S    G   +G+ +++ +  F  M+ S          ++++    + G  +EA ++ 
Sbjct: 186 VTYSCLIDGLCKEGR-LKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLL 244

Query: 734 EVAAQKNVYPDAVKEKGMSYWLINLHVMSDGTAVIALSRTLAWFRKQMLISGVGPSRIDI 793
           E  A+    PD V    +      L  + D   ++           QM   G+ P   D+
Sbjct: 245 ERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLL----------NQMTRKGLTP---DV 291

Query: 794 VT------GWGRRSRVT 804
           VT      G  R +R++
Sbjct: 292 VTFTSLMDGLCRENRLS 308


>gi|297796945|ref|XP_002866357.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297312192|gb|EFH42616.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 907

 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 109/415 (26%), Positives = 192/415 (46%), Gaps = 5/415 (1%)

Query: 334 LKQLQDHTVALGFFNWLRRQAGFKHDEHTYTTMV-GILGRARQFGAINKLLDQMVRDGCQ 392
           L ++Q+  V L   + + R   F   E   +++V G+  R +   A+N L+ ++   G  
Sbjct: 307 LCKVQEFEVGLEMIDEMLRLR-FSPSEAAVSSLVEGLRKRGKVEEALN-LVKRVAEFGVS 364

Query: 393 PNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDM 452
           PN+  YN LI S  +    +EA  +F +M  +G  P+ VTY  LID+  + G LD A+  
Sbjct: 365 PNIFVYNALIDSLCKGRNFDEAELLFDRMGKIGLCPNDVTYSILIDMFCRRGKLDTALSF 424

Query: 453 YKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAK 512
             +M   GL P  + Y+ +IN   K G + AA  L  EM+N+   P +VTY  ++     
Sbjct: 425 LGEMIDMGLKPSVYPYNSLINGHCKFGDISAAESLMAEMINKKLEPTVVTYTSLMGGYCS 484

Query: 513 ARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPV 572
                 AL+LY +M   G  P   T++ ++  L   G + +A  +F EM   N  P+   
Sbjct: 485 KGKINKALRLYHEMTGKGIVPSIYTFTTLLSGLFRAGLIRDAVKLFTEMAEWNVKPNRVT 544

Query: 573 YGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGML 632
           Y ++++ + + GN+ KA+E+   M++ G+ P+  +   L+      GQ S+A   + G+ 
Sbjct: 545 YNVMIEGYCEEGNMSKAFEFLNEMIEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLH 604

Query: 633 NLGLKPSLQTYT-LLLSCCTEARSPYDMGFCHELMAVSGHPAHMFLLSMPSPGPDGQNVR 691
               + +   YT LL   C E +    +  C + M + G    +    +   G      R
Sbjct: 605 KGNCELNEICYTGLLHGFCREGKLEEALSVCQD-MGLRGVDLDLVCYGVLIDGSLKHKDR 663

Query: 692 DHVGSFLEMMHSEDRESKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAV 746
                 L+ MH    +    +  +++D   K+G  +EA  +W++   +   P+ V
Sbjct: 664 KVFLGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEV 718



 Score =  137 bits (344), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 88/295 (29%), Positives = 136/295 (46%)

Query: 354 AGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNE 413
            G + D + YT ++  L   +      +++ QM   GC  N+V YN LI    +   + E
Sbjct: 221 VGIRPDVYIYTGVIRSLCELKDLSRAKEMIVQMEATGCDVNIVPYNVLIDGLCKKQKVWE 280

Query: 414 ALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIIN 473
           A+ + K +     +PD VTYCTL+    K    +V ++M  +M     SP     S ++ 
Sbjct: 281 AVGIKKDLAGKELKPDVVTYCTLVCGLCKVQEFEVGLEMIDEMLRLRFSPSEAAVSSLVE 340

Query: 474 CLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEP 533
            L K G ++ A  L   +   G  PN+  YN +I    K RN+  A  L+  M   G  P
Sbjct: 341 GLRKRGKVEEALNLVKRVAEFGVSPNIFVYNALIDSLCKGRNFDEAELLFDRMGKIGLCP 400

Query: 534 DKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWY 593
           + VTYSI++++    G LD A +   EM      P    Y  L++   K G++  A    
Sbjct: 401 NDVTYSILIDMFCRRGKLDTALSFLGEMIDMGLKPSVYPYNSLINGHCKFGDISAAESLM 460

Query: 594 EAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
             M+   L P V T  SL+  +   G+++ A  L   M   G+ PS+ T+T LLS
Sbjct: 461 AEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIVPSIYTFTTLLS 515



 Score =  132 bits (333), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 90/355 (25%), Positives = 163/355 (45%), Gaps = 1/355 (0%)

Query: 347 FNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYG 406
           F  +  +     +  T + ++  L + R FG   +L D M+  G +P+V  Y  +I S  
Sbjct: 179 FKMMMTKVSLLPEVRTLSALLHGLVKFRHFGLAMELFDDMINVGIRPDVYIYTGVIRSLC 238

Query: 407 RANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTF 466
               L+ A ++  QM+  GC+ + V Y  LID   K   +  A+ + K +    L PD  
Sbjct: 239 ELKDLSRAKEMIVQMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKELKPDVV 298

Query: 467 TYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDM 526
           TY  ++  L K    +   ++  EM+     P+    + ++    K    + AL L + +
Sbjct: 299 TYCTLVCGLCKVQEFEVGLEMIDEMLRLRFSPSEAAVSSLVEGLRKRGKVEEALNLVKRV 358

Query: 527 QNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNV 586
              G  P+   Y+ +++ L      DEAE +F  M +    P++  Y +L+D++ + G +
Sbjct: 359 AEFGVSPNIFVYNALIDSLCKGRNFDEAELLFDRMGKIGLCPNDVTYSILIDMFCRRGKL 418

Query: 587 RKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLL 646
             A  +   M+  GL+P+V   NSL++   + G +S A  L+  M+N  L+P++ TYT L
Sbjct: 419 DTALSFLGEMIDMGLKPSVYPYNSLINGHCKFGDISAAESLMAEMINKKLEPTVVTYTSL 478

Query: 647 L-SCCTEARSPYDMGFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEM 700
           +   C++ +    +   HE+      P+     ++ S       +RD V  F EM
Sbjct: 479 MGGYCSKGKINKALRLYHEMTGKGIVPSIYTFTTLLSGLFRAGLIRDAVKLFTEM 533



 Score =  124 bits (312), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 90/335 (26%), Positives = 144/335 (42%), Gaps = 36/335 (10%)

Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLI 402
           A  F N +  + G   D ++Y  ++  L    Q       +D + +  C+ N + Y  L+
Sbjct: 561 AFEFLNEMI-EKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLL 619

Query: 403 HSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLS 462
           H + R   L EAL V + M + G + D V Y  LID   K     V + + K+M   GL 
Sbjct: 620 HGFCREGKLEEALSVCQDMGLRGVDLDLVCYGVLIDGSLKHKDRKVFLGLLKEMHDRGLK 679

Query: 463 PDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKL 522
           PD   Y+ +I+   K G  + A  ++  M+N+GC+PN VTY  +I    KA     A  L
Sbjct: 680 PDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEIL 739

Query: 523 YRDMQNAGFEPDKVTYSIVMEVL---------------------------------GHC- 548
              M+     P++VTY   +++L                                 G C 
Sbjct: 740 CSKMRPGNSVPNQVTYGCFLDILTKGVGDMKKAVELHNAILKGLLANTATYNMLIRGFCR 799

Query: 549 -GYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPT 607
            G ++EA  +   M      PD   Y  ++    +  +V+KA E + +M + G+RP+   
Sbjct: 800 QGRMEEASELITRMIGDGVSPDCITYTTMISELCRRNDVKKAIELWNSMTEKGIRPDRVA 859

Query: 608 CNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQT 642
            N+L+      G++  A  L   ML  GLKP+ +T
Sbjct: 860 YNTLIHGCCVAGEMGKATELRNEMLRQGLKPNTET 894



 Score =  110 bits (275), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 74/277 (26%), Positives = 129/277 (46%), Gaps = 38/277 (13%)

Query: 338 QDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVT 397
           +D  V LG    +  + G K D+  YT+M+    +   F     + D M+ +GC PN VT
Sbjct: 661 KDRKVFLGLLKEMHDR-GLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVT 719

Query: 398 YNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKA-GFLDVAMDMYKKM 456
           Y  +I+   +A ++NEA  +  +M+     P++VTY   +DI  K  G +  A++++  +
Sbjct: 720 YTAVINGLCKAGFVNEAEILCSKMRPGNSVPNQVTYGCFLDILTKGVGDMKKAVELHNAI 779

Query: 457 QAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNY 516
              GL  +T TY+++I    + G ++ A +L   M+  G  P+ +TY  MI+   +  + 
Sbjct: 780 -LKGLLANTATYNMLIRGFCRQGRMEEASELITRMIGDGVSPDCITYTTMISELCRRNDV 838

Query: 517 QSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLL 576
           + A++L+  M   G  PD+V Y+ +                              ++G  
Sbjct: 839 KKAIELWNSMTEKGIRPDRVAYNTL------------------------------IHGCC 868

Query: 577 VDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLS 613
           V     AG + KA E    ML+ GL+PN  T  + +S
Sbjct: 869 V-----AGEMGKATELRNEMLRQGLKPNTETSETTIS 900



 Score = 80.9 bits (198), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 95/417 (22%), Positives = 166/417 (39%), Gaps = 63/417 (15%)

Query: 298 VESVSRILR-QWKWGPLAEEALGNTNYS--MDAYQANQVL-KQLQDHTVALGFFNWLRRQ 353
           V+SV RI+R +  W    E AL +   S  +      ++L   + D  + L FFN+L   
Sbjct: 42  VDSVRRIVRGKRSW----EIALSSELVSRRLKTIHVEEILIGTIDDPKLGLRFFNFLGLH 97

Query: 354 AGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNE 413
            GF H   ++  ++  L +A  F   + LL  ++    +P+ V ++ L   Y +    + 
Sbjct: 98  RGFDHSTASFCILIHALVQANLFWPASSLLQTLLLRALKPSEV-FDALFSCYEKCKLSSS 156

Query: 414 A-LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
           +  D+  Q  V      RV              LD  +     M    L P+  T S ++
Sbjct: 157 SSFDLLIQHYV---RSRRV--------------LDGVLVFKMMMTKVSLLPEVRTLSALL 199

Query: 473 NCLGKAGHLQAAHQLFCEMVN-----------------------------------QGCI 497
           + L K  H   A +LF +M+N                                    GC 
Sbjct: 200 HGLVKFRHFGLAMELFDDMINVGIRPDVYIYTGVIRSLCELKDLSRAKEMIVQMEATGCD 259

Query: 498 PNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAV 557
            N+V YN++I    K +    A+ + +D+     +PD VTY  ++  L      +    +
Sbjct: 260 VNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKELKPDVVTYCTLVCGLCKVQEFEVGLEM 319

Query: 558 FAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLR 617
             EM R  + P E     LV+   K G V +A    + + + G+ PN+   N+L+ +  +
Sbjct: 320 IDEMLRLRFSPSEAAVSSLVEGLRKRGKVEEALNLVKRVAEFGVSPNIFVYNALIDSLCK 379

Query: 618 VGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSC-CTEARSPYDMGFCHELMAVSGHPA 673
                +A  L   M  +GL P+  TY++L+   C   +    + F  E++ +   P+
Sbjct: 380 GRNFDEAELLFDRMGKIGLCPNDVTYSILIDMFCRRGKLDTALSFLGEMIDMGLKPS 436


>gi|115459104|ref|NP_001053152.1| Os04g0488500 [Oryza sativa Japonica Group]
 gi|113564723|dbj|BAF15066.1| Os04g0488500 [Oryza sativa Japonica Group]
          Length = 801

 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 102/344 (29%), Positives = 161/344 (46%), Gaps = 42/344 (12%)

Query: 362 TYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQM 421
           TY  +V  L +A +    ++LLD M+  GC+PN + Y+ LI  + +A  ++ A +VF QM
Sbjct: 446 TYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQM 505

Query: 422 QVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHL 481
              G  P   TY +LID   K G LD+AM +  +M     +P+  TY+ +I+ L + G  
Sbjct: 506 TKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGES 565

Query: 482 QAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIV 541
           + A +L   M  +GC PN+VTY  +I    KA     +L L+  M   G  P+ VTY ++
Sbjct: 566 EKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYRVL 625

Query: 542 MEVLGHCGYLDEAEAVFAEMRRKNW---------------------------------VP 568
           +  L   G LD+A  +  EM++  W                                 VP
Sbjct: 626 INHLCAAGLLDKARLLLGEMKQTYWPKYLQGYRCAIQGFSKSFIASLGILEEMESYGTVP 685

Query: 569 DEPVYGLLVDLWGKAGNVRKAWEWYEAMLQ--AGLRPNVPTCNSLLSAFLRVGQLSDAYH 626
             PVYG+L+D + KAG +  A E ++ M++  + ++ +     SL+ A     Q+ +A+ 
Sbjct: 686 IAPVYGMLIDCFSKAGRLEIAMELHKEMMEVPSSVKTDNDMYASLIQALCLASQVEEAFR 745

Query: 627 LLQGMLNLGLKPSLQTYTLLLSCCTEARSPYD------MGFCHE 664
           L   M   G  P L  +  L+    E +  +D       G CHE
Sbjct: 746 LYSEMTRRGFVPELSVFVCLIKGLVEVKK-WDEALQLCYGICHE 788



 Score =  149 bits (376), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 91/313 (29%), Positives = 151/313 (48%), Gaps = 16/313 (5%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           +  G   D +TYT ++    +A        L ++M   GC P VVTY  LIH+Y +A  +
Sbjct: 315 KMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQV 374

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAG----------- 460
            +A D+F +M   GC P+ VTY  L+D   KAG +  A ++Y K+               
Sbjct: 375 PQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPC 434

Query: 461 -----LSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARN 515
                L+P+  TY  +++ L KA  +  AH+L   M++ GC PN + Y+ +I    KA  
Sbjct: 435 EDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGK 494

Query: 516 YQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGL 575
             SA +++  M   G+ P   TY+ +++ +   G LD A  V ++M + +  P+   Y  
Sbjct: 495 IDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTA 554

Query: 576 LVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLG 635
           ++D   + G   KA +    M + G  PNV T  +L+    + G++  +  L   M   G
Sbjct: 555 MIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKG 614

Query: 636 LKPSLQTYTLLLS 648
             P+  TY +L++
Sbjct: 615 CSPNYVTYRVLIN 627



 Score =  146 bits (368), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 90/311 (28%), Positives = 151/311 (48%), Gaps = 16/311 (5%)

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
           + GF  D  TY+ ++  L  A +      L  +M   G  P+V TY  LI S+ +A  + 
Sbjct: 281 RKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIE 340

Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
           +A  +F++M+ VGC P  VTY  LI  + KA  +  A D++ +M  AG  P+  TY  ++
Sbjct: 341 QAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALV 400

Query: 473 NCLGKAGHLQAAHQLFCEMVN----------------QGCIPNLVTYNIMIALQAKARNY 516
           + L KAG++  A +++ +++                     PN+VTY  ++    KA   
Sbjct: 401 DGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKV 460

Query: 517 QSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLL 576
             A +L   M ++G EP+ + Y  +++     G +D A+ VF +M +  ++P    Y  L
Sbjct: 461 DHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSL 520

Query: 577 VDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGL 636
           +D   K G +  A +    ML+    PNV T  +++    R+G+   A  LL  M   G 
Sbjct: 521 IDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGC 580

Query: 637 KPSLQTYTLLL 647
            P++ TYT L+
Sbjct: 581 SPNVVTYTALI 591



 Score =  140 bits (352), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 88/289 (30%), Positives = 146/289 (50%), Gaps = 16/289 (5%)

Query: 375 QFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYC 434
           +F    +L+ +M+R G  P+  TY+++I     A  + +A  +F++M++VG  PD  TY 
Sbjct: 268 KFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYT 327

Query: 435 TLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQ 494
            LID   KAG ++ A  ++++M++ G SP   TY+ +I+   KA  +  A+ +F  MV+ 
Sbjct: 328 ILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDA 387

Query: 495 GCIPNLVTYNIMIALQAKARNYQSALKLY------RDMQNAGF----------EPDKVTY 538
           GC PN VTY  ++    KA N   A ++Y       D  ++ F           P+ VTY
Sbjct: 388 GCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTY 447

Query: 539 SIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQ 598
             +++ L     +D A  +   M      P+  VY  L+D + KAG +  A E +  M +
Sbjct: 448 GALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTK 507

Query: 599 AGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
            G  P+V T  SL+    + G+L  A  +L  ML     P++ TYT ++
Sbjct: 508 CGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMI 556



 Score =  135 bits (339), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 84/338 (24%), Positives = 156/338 (46%), Gaps = 11/338 (3%)

Query: 304 ILRQWKWGPLAEEALGNTNYSMDAYQANQVLKQLQDHTV---ALGFFNWLRRQAGFKHDE 360
           + ++ +W   A + +   ++ +D      ++  L + +    A+ F + +R  +    + 
Sbjct: 85  LCKEGRWAD-ALDMIEREDFKLDTVLCTHMISGLMEASYFDEAMSFLHRMRCNSCIP-NV 142

Query: 361 HTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQ 420
            TY T++    + +Q G   ++++ M+ +GC PN   +N L+HSY        A  +  +
Sbjct: 143 VTYRTLLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNR 202

Query: 421 MQVVGCEPDRVTYCTLI------DIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
           M   GC P  V Y   I      +       LD+A  +Y +M AA    +    +    C
Sbjct: 203 MTTCGCPPGYVVYNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARC 262

Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPD 534
           L   G    A QL  EM+ +G +P+  TY+ +I     A   + A  L+++M+  G  PD
Sbjct: 263 LCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPD 322

Query: 535 KVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYE 594
             TY+I+++     G +++A+ +F EMR     P    Y  L+  + KA  V +A + + 
Sbjct: 323 VYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFH 382

Query: 595 AMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGML 632
            M+ AG RPN  T  +L+    + G +S A+ +   ++
Sbjct: 383 RMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLI 420



 Score =  134 bits (338), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 85/287 (29%), Positives = 141/287 (49%), Gaps = 22/287 (7%)

Query: 380 NKLLDQMVRDGC---QPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTL 436
            K+  +M+   C   + NV  + R +   G+    ++A  + K+M   G  PD  TY  +
Sbjct: 238 EKIYGEMLAANCVLNKVNVANFARCLCGVGK---FDKAFQLIKEMMRKGFVPDTSTYSKV 294

Query: 437 IDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGC 496
           I     A  ++ A  ++++M+  G++PD +TY+++I+   KAG ++ A  LF EM + GC
Sbjct: 295 ITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGC 354

Query: 497 IPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEA 556
            P +VTY  +I    KA+    A  ++  M +AG  P+ VTY  +++ L   G + +A  
Sbjct: 355 SPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFE 414

Query: 557 VFAEM----------------RRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAG 600
           V+A++                 R    P+   YG LVD   KA  V  A E  +AML +G
Sbjct: 415 VYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSG 474

Query: 601 LRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
             PN    ++L+  F + G++  A  +   M   G  PS+ TYT L+
Sbjct: 475 CEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLI 521



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 85/289 (29%), Positives = 140/289 (48%), Gaps = 10/289 (3%)

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
           + G+    HTYT+++  + +  +     K+L QM++D C PNVVTY  +I    R     
Sbjct: 507 KCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESE 566

Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
           +AL +   M+  GC P+ VTY  LID   KAG +D+++D++ +M   G SP+  TY V+I
Sbjct: 567 KALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYRVLI 626

Query: 473 NCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFE 532
           N L  AG L  A  L  EM        L  Y    A+Q  ++++ ++L +  +M++ G  
Sbjct: 627 NHLCAAGLLDKARLLLGEMKQTYWPKYLQGYR--CAIQGFSKSFIASLGILEEMESYGTV 684

Query: 533 PDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVP-----DEPVYGLLVDLWGKAGNVR 587
           P    Y ++++     G L+ A  +  EM     VP     D  +Y  L+     A  V 
Sbjct: 685 PIAPVYGMLIDCFSKAGRLEIAMELHKEMME---VPSSVKTDNDMYASLIQALCLASQVE 741

Query: 588 KAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGL 636
           +A+  Y  M + G  P +     L+   + V +  +A  L  G+ + G+
Sbjct: 742 EAFRLYSEMTRRGFVPELSVFVCLIKGLVEVKKWDEALQLCYGICHEGV 790



 Score =  124 bits (312), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 83/277 (29%), Positives = 135/277 (48%), Gaps = 3/277 (1%)

Query: 393 PNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDM 452
           PNVVTY  L+    +A+ ++ A ++   M   GCEP+ + Y  LID   KAG +D A ++
Sbjct: 442 PNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEV 501

Query: 453 YKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAK 512
           + +M   G  P   TY+ +I+ + K G L  A ++  +M+   C PN+VTY  MI    +
Sbjct: 502 FLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCR 561

Query: 513 ARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPV 572
               + ALKL   M+  G  P+ VTY+ +++ LG  G +D +  +F +M RK   P+   
Sbjct: 562 IGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVT 621

Query: 573 YGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGML 632
           Y +L++    AG + KA      M Q      +      +  F +      +  +L+ M 
Sbjct: 622 YRVLINHLCAAGLLDKARLLLGEMKQTYWPKYLQGYRCAIQGFSK--SFIASLGILEEME 679

Query: 633 NLGLKPSLQTYTLLLSCCTEA-RSPYDMGFCHELMAV 668
           + G  P    Y +L+ C ++A R    M    E+M V
Sbjct: 680 SYGTVPIAPVYGMLIDCFSKAGRLEIAMELHKEMMEV 716



 Score =  122 bits (307), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 107/449 (23%), Positives = 173/449 (38%), Gaps = 23/449 (5%)

Query: 307 QWKWGPLAEEALGNTNYSMDAYQANQVLKQLQDHTVALGFFNWLRRQAGFKHDEHTYTTM 366
           Q   G   ++ +  + + MD +        L          + + R+  FK D    T M
Sbjct: 55  QVDLGFRVQKEMSESGFCMDRFTVGCFAHALCKEGRWADALDMIERE-DFKLDTVLCTHM 113

Query: 367 VGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGC 426
           +  L  A  F      L +M  + C PNVVTY  L+  + +   L     +   M   GC
Sbjct: 114 ISGLMEASYFDEAMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQLGWCKRIINMMMTEGC 173

Query: 427 EPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIIN--C----LGKAGH 480
            P+   + +L+  +        A  +  +M   G  P    Y++ I   C    L     
Sbjct: 174 NPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYNIFIGSICGQEKLPSPDL 233

Query: 481 LQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSI 540
           L  A +++ EM+   C+ N V              +  A +L ++M   GF PD  TYS 
Sbjct: 234 LDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSK 293

Query: 541 VMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAG 600
           V+  L H   +++A  +F EM+     PD   Y +L+D + KAG + +A   +E M   G
Sbjct: 294 VITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVG 353

Query: 601 LRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS-CCTEARSPYDM 659
             P V T  +L+ A+L+  Q+  A  +   M++ G +P+  TY  L+   C         
Sbjct: 354 CSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAF 413

Query: 660 GFCHELMAVSGHPAHMFLLSMPSPGPDGQNV---------------RDHVGSFLEMMHSE 704
               +L+  S      F            NV                DH    L+ M S 
Sbjct: 414 EVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSS 473

Query: 705 DRESKRGLVDAVVDFLHKSGLKEEAGSVW 733
             E    + DA++D   K+G  + A  V+
Sbjct: 474 GCEPNHIVYDALIDGFCKAGKIDSAQEVF 502



 Score = 90.5 bits (223), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 77/331 (23%), Positives = 123/331 (37%), Gaps = 73/331 (22%)

Query: 390 GCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVT----------------- 432
           G +P+ VTYN L+     A  ++    V K+M   G   DR T                 
Sbjct: 35  GYRPSKVTYNALVQVLSSAGQVDLGFRVQKEMSESGFCMDRFTVGCFAHALCKEGRWADA 94

Query: 433 --------------YCT-LIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGK 477
                          CT +I    +A + D AM    +M+     P+  TY  +++   K
Sbjct: 95  LDMIEREDFKLDTVLCTHMISGLMEASYFDEAMSFLHRMRCNSCIPNVVTYRTLLSGFLK 154

Query: 478 AGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVT 537
              L    ++   M+ +GC PN   +N ++      ++Y  A KL   M   G  P  V 
Sbjct: 155 KKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVV 214

Query: 538 YSIVM-----------------------------------------EVLGHCGYLDEAEA 556
           Y+I +                                           L   G  D+A  
Sbjct: 215 YNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQ 274

Query: 557 VFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFL 616
           +  EM RK +VPD   Y  ++     A  V KA+  ++ M   G+ P+V T   L+ +F 
Sbjct: 275 LIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFC 334

Query: 617 RVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
           + G +  A  L + M ++G  P++ TYT L+
Sbjct: 335 KAGLIEQAQWLFEEMRSVGCSPTVVTYTALI 365



 Score = 79.0 bits (193), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 57/216 (26%), Positives = 95/216 (43%), Gaps = 35/216 (16%)

Query: 350 LRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRAN 409
           L  + G   +  TYT ++  LG+A +      L  QM R GC PN VTY  LI+    A 
Sbjct: 574 LMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYRVLINHLCAAG 633

Query: 410 YLNEA---------------------------------LDVFKQMQVVGCEPDRVTYCTL 436
            L++A                                 L + ++M+  G  P    Y  L
Sbjct: 634 LLDKARLLLGEMKQTYWPKYLQGYRCAIQGFSKSFIASLGILEEMESYGTVPIAPVYGML 693

Query: 437 IDIHAKAGFLDVAMDMYKKMQA--AGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQ 494
           ID  +KAG L++AM+++K+M    + +  D   Y+ +I  L  A  ++ A +L+ EM  +
Sbjct: 694 IDCFSKAGRLEIAMELHKEMMEVPSSVKTDNDMYASLIQALCLASQVEEAFRLYSEMTRR 753

Query: 495 GCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAG 530
           G +P L  +  +I    + + +  AL+L   + + G
Sbjct: 754 GFVPELSVFVCLIKGLVEVKKWDEALQLCYGICHEG 789



 Score = 42.7 bits (99), Expect = 0.78,   Method: Compositional matrix adjust.
 Identities = 30/123 (24%), Positives = 50/123 (40%), Gaps = 3/123 (2%)

Query: 526 MQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGN 585
           +++ G+ P KVTY+ +++VL   G +D    V  EM    +  D    G       K G 
Sbjct: 31  LKDFGYRPSKVTYNALVQVLSSAGQVDLGFRVQKEMSESGFCMDRFTVGCFAHALCKEGR 90

Query: 586 VRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTL 645
              A +  E   +   + +   C  ++S  +      +A   L  M      P++ TY  
Sbjct: 91  WADALDMIE---REDFKLDTVLCTHMISGLMEASYFDEAMSFLHRMRCNSCIPNVVTYRT 147

Query: 646 LLS 648
           LLS
Sbjct: 148 LLS 150


>gi|357494039|ref|XP_003617308.1| Auxin response factor [Medicago truncatula]
 gi|355518643|gb|AET00267.1| Auxin response factor [Medicago truncatula]
          Length = 948

 Score =  157 bits (397), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 98/312 (31%), Positives = 153/312 (49%), Gaps = 2/312 (0%)

Query: 363 YTTMV-GILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQM 421
           Y T++ G +   R   A + L   MV  G +P+  T+N +I    +  YL  AL+   +M
Sbjct: 339 YNTLINGYVVSGRFEEAKDLLYKNMVIAGFEPDAFTFNIMIDGLCKKGYLVSALEFLDEM 398

Query: 422 QVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHL 481
              G EP+ +TY  LID   K G  + A  +   M A GLS +T  Y+ +I  L K G +
Sbjct: 399 VKKGFEPNVITYTILIDGFCKQGHFEEASKVVNSMSAKGLSLNTVGYNCLIGALCKDGKI 458

Query: 482 QAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIV 541
           Q A Q++ EM ++GC P++ T+N +I    K    + AL LYRDM   G   + VTY+ +
Sbjct: 459 QDALQMYGEMSSKGCKPDIYTFNSLIYGLCKNDKMEEALGLYRDMLLEGVIANTVTYNTL 518

Query: 542 MEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGL 601
           +        + +A+ +  EMR +    D   Y  L+    K G   K     E M    +
Sbjct: 519 IHAFLRLELIQQADKLVGEMRFRGCPLDNITYNGLIKALCKTGATEKCLGLIEQMFGEEI 578

Query: 602 RPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS-CCTEARSPYDMG 660
            P++ +CN L+++F R G+++DA   L+ M+  GL P + TY  L++  C   R    + 
Sbjct: 579 FPSINSCNILINSFCRTGKVNDALQFLRDMIQRGLTPDIVTYNSLINGLCKMGRFQEALN 638

Query: 661 FCHELMAVSGHP 672
             + L A   HP
Sbjct: 639 LFNGLQAKGIHP 650



 Score =  149 bits (376), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 88/295 (29%), Positives = 150/295 (50%)

Query: 354 AGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNE 413
           AGF+ D  T+  M+  L +     +  + LD+MV+ G +PNV+TY  LI  + +  +  E
Sbjct: 366 AGFEPDAFTFNIMIDGLCKKGYLVSALEFLDEMVKKGFEPNVITYTILIDGFCKQGHFEE 425

Query: 414 ALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIIN 473
           A  V   M   G   + V Y  LI    K G +  A+ MY +M + G  PD +T++ +I 
Sbjct: 426 ASKVVNSMSAKGLSLNTVGYNCLIGALCKDGKIQDALQMYGEMSSKGCKPDIYTFNSLIY 485

Query: 474 CLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEP 533
            L K   ++ A  L+ +M+ +G I N VTYN +I    +    Q A KL  +M+  G   
Sbjct: 486 GLCKNDKMEEALGLYRDMLLEGVIANTVTYNTLIHAFLRLELIQQADKLVGEMRFRGCPL 545

Query: 534 DKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWY 593
           D +TY+ +++ L   G  ++   +  +M  +   P      +L++ + + G V  A ++ 
Sbjct: 546 DNITYNGLIKALCKTGATEKCLGLIEQMFGEEIFPSINSCNILINSFCRTGKVNDALQFL 605

Query: 594 EAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
             M+Q GL P++ T NSL++   ++G+  +A +L  G+   G+ P   TY  L+S
Sbjct: 606 RDMIQRGLTPDIVTYNSLINGLCKMGRFQEALNLFNGLQAKGIHPDAVTYNTLIS 660



 Score =  130 bits (326), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 112/427 (26%), Positives = 189/427 (44%), Gaps = 54/427 (12%)

Query: 363 YTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQ 422
           Y  ++  L    +     KLL++M   GC+P+V T+N +IH   +A  ++EA  +  +M 
Sbjct: 238 YQMLIHALSENNRVNEAMKLLEEMFLMGCEPDVQTFNDVIHGLCKAGRIHEAAKLHDRML 297

Query: 423 VVG---------------CE----------------PDRVTYCTLIDIHAKAGFLDVAMD 451
           +                 C                 P+ V Y TLI+ +  +G  + A D
Sbjct: 298 LRDFTADALIQGYLMHGLCRMGKVDEARAMLSKIPNPNTVLYNTLINGYVVSGRFEEAKD 357

Query: 452 M-YKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQ 510
           + YK M  AG  PD FT++++I+ L K G+L +A +   EMV +G  PN++TY I+I   
Sbjct: 358 LLYKNMVIAGFEPDAFTFNIMIDGLCKKGYLVSALEFLDEMVKKGFEPNVITYTILIDGF 417

Query: 511 AKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDE 570
            K  +++ A K+   M   G   + V Y+ ++  L   G + +A  ++ EM  K   PD 
Sbjct: 418 CKQGHFEEASKVVNSMSAKGLSLNTVGYNCLIGALCKDGKIQDALQMYGEMSSKGCKPDI 477

Query: 571 PVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQG 630
             +  L+    K   + +A   Y  ML  G+  N  T N+L+ AFLR+  +  A  L+  
Sbjct: 478 YTFNSLIYGLCKNDKMEEALGLYRDMLLEGVIANTVTYNTLIHAFLRLELIQQADKLVGE 537

Query: 631 MLNLGLKPSLQTYT-LLLSCCTEARSPYDMGFCHELMAVSGHPA----HMFLLSMPSPGP 685
           M   G      TY  L+ + C    +   +G   ++      P+    ++ + S    G 
Sbjct: 538 MRFRGCPLDNITYNGLIKALCKTGATEKCLGLIEQMFGEEIFPSINSCNILINSFCRTG- 596

Query: 686 DGQNVRDHVGSFLEMMHSEDRESKRGLVDAVVDF------LHKSGLKEEAGSVWEVAAQK 739
               V D +    +M+       +RGL   +V +      L K G  +EA +++     K
Sbjct: 597 ---KVNDALQFLRDMI-------QRGLTPDIVTYNSLINGLCKMGRFQEALNLFNGLQAK 646

Query: 740 NVYPDAV 746
            ++PDAV
Sbjct: 647 GIHPDAV 653



 Score =  127 bits (318), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 111/451 (24%), Positives = 195/451 (43%), Gaps = 37/451 (8%)

Query: 324 SMDAYQANQVLKQLQ---DHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAIN 380
           S++    +Q+ K L+   D   ++  F     Q G+ H  H Y  ++  LG   +F  I+
Sbjct: 55  SLNPITPSQLCKLLELPLDVPTSMDLFEKAGLQRGYIHSFHVYYLLIDKLGNVGEFKMID 114

Query: 381 KLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGC-EPDRVTYCTLIDI 439
           KLL QM  +GC      +  ++  YG+A    +A  +   M  V C EP   +Y  +++I
Sbjct: 115 KLLKQMKDEGCVFKESLFILIMRYYGKAGLPGQATRLLLDMWGVYCFEPTFKSYNVVLEI 174

Query: 440 HAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPN 499
                   VA +++  M + G+SP  +T+ V++        + +A  L  +M   GC+PN
Sbjct: 175 LVAGNCPKVAPNVFYDMLSRGISPTVYTFGVVMKAFCMVNEVDSACSLLRDMTKHGCVPN 234

Query: 500 LVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFA 559
            + Y ++I   ++      A+KL  +M   G EPD  T++ V+  L   G + EA  +  
Sbjct: 235 SIIYQMLIHALSENNRVNEAMKLLEEMFLMGCEPDVQTFNDVIHGLCKAGRIHEAAKLHD 294

Query: 560 EMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVG 619
            M  +++  D  + G L+    + G V +A     AML     PN    N+L++ ++  G
Sbjct: 295 RMLLRDFTADALIQGYLMHGLCRMGKVDEA----RAMLSKIPNPNTVLYNTLINGYVVSG 350

Query: 620 QLSDAYHLL-QGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGFCHELMAVSGHPAHMFLL 678
           +  +A  LL + M+  G +P   T+ +++            G C +   VS   A  FL 
Sbjct: 351 RFEEAKDLLYKNMVIAGFEPDAFTFNIMID-----------GLCKKGYLVS---ALEFLD 396

Query: 679 SMPSPG--PDGQNVRDHVGSFLEMMHSEDRE------SKRGL------VDAVVDFLHKSG 724
            M   G  P+       +  F +  H E+        S +GL       + ++  L K G
Sbjct: 397 EMVKKGFEPNVITYTILIDGFCKQGHFEEASKVVNSMSAKGLSLNTVGYNCLIGALCKDG 456

Query: 725 LKEEAGSVWEVAAQKNVYPDAVKEKGMSYWL 755
             ++A  ++   + K   PD      + Y L
Sbjct: 457 KIQDALQMYGEMSSKGCKPDIYTFNSLIYGL 487



 Score =  117 bits (292), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 84/326 (25%), Positives = 160/326 (49%), Gaps = 4/326 (1%)

Query: 326 DAYQANQVLKQL--QDHTV-ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKL 382
           DA+  N ++  L  + + V AL F + + ++ GF+ +  TYT ++    +   F   +K+
Sbjct: 371 DAFTFNIMIDGLCKKGYLVSALEFLDEMVKK-GFEPNVITYTILIDGFCKQGHFEEASKV 429

Query: 383 LDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAK 442
           ++ M   G   N V YN LI +  +   + +AL ++ +M   GC+PD  T+ +LI    K
Sbjct: 430 VNSMSAKGLSLNTVGYNCLIGALCKDGKIQDALQMYGEMSSKGCKPDIYTFNSLIYGLCK 489

Query: 443 AGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVT 502
              ++ A+ +Y+ M   G+  +T TY+ +I+   +   +Q A +L  EM  +GC  + +T
Sbjct: 490 NDKMEEALGLYRDMLLEGVIANTVTYNTLIHAFLRLELIQQADKLVGEMRFRGCPLDNIT 549

Query: 503 YNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMR 562
           YN +I    K    +  L L   M      P   + +I++      G +++A     +M 
Sbjct: 550 YNGLIKALCKTGATEKCLGLIEQMFGEEIFPSINSCNILINSFCRTGKVNDALQFLRDMI 609

Query: 563 RKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLS 622
           ++   PD   Y  L++   K G  ++A   +  +   G+ P+  T N+L+S +   G  +
Sbjct: 610 QRGLTPDIVTYNSLINGLCKMGRFQEALNLFNGLQAKGIHPDAVTYNTLISRYCYEGLFN 669

Query: 623 DAYHLLQGMLNLGLKPSLQTYTLLLS 648
           DA  LL   ++ G  P+  T+++L++
Sbjct: 670 DACQLLFKGVSNGFIPNEITWSILIN 695



 Score =  108 bits (269), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 70/268 (26%), Positives = 124/268 (46%)

Query: 363 YTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQ 422
           Y  ++G L +  +     ++  +M   GC+P++ T+N LI+   + + + EAL +++ M 
Sbjct: 445 YNCLIGALCKDGKIQDALQMYGEMSSKGCKPDIYTFNSLIYGLCKNDKMEEALGLYRDML 504

Query: 423 VVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQ 482
           + G   + VTY TLI    +   +  A  +  +M+  G   D  TY+ +I  L K G  +
Sbjct: 505 LEGVIANTVTYNTLIHAFLRLELIQQADKLVGEMRFRGCPLDNITYNGLIKALCKTGATE 564

Query: 483 AAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVM 542
               L  +M  +   P++ + NI+I    +      AL+  RDM   G  PD VTY+ ++
Sbjct: 565 KCLGLIEQMFGEEIFPSINSCNILINSFCRTGKVNDALQFLRDMIQRGLTPDIVTYNSLI 624

Query: 543 EVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLR 602
             L   G   EA  +F  ++ K   PD   Y  L+  +   G    A +     +  G  
Sbjct: 625 NGLCKMGRFQEALNLFNGLQAKGIHPDAVTYNTLISRYCYEGLFNDACQLLFKGVSNGFI 684

Query: 603 PNVPTCNSLLSAFLRVGQLSDAYHLLQG 630
           PN  T + L++ F++    S+ + +L G
Sbjct: 685 PNEITWSILINYFVKNNSDSEQFTILMG 712



 Score = 41.6 bits (96), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 25/90 (27%), Positives = 40/90 (44%)

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
           Q G   D  TY +++  L +  +F     L + +   G  P+ VTYN LI  Y      N
Sbjct: 610 QRGLTPDIVTYNSLINGLCKMGRFQEALNLFNGLQAKGIHPDAVTYNTLISRYCYEGLFN 669

Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAK 442
           +A  +  +    G  P+ +T+  LI+   K
Sbjct: 670 DACQLLFKGVSNGFIPNEITWSILINYFVK 699


>gi|449449677|ref|XP_004142591.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
           mitochondrial-like [Cucumis sativus]
          Length = 748

 Score =  157 bits (396), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 91/313 (29%), Positives = 159/313 (50%)

Query: 359 DEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVF 418
           D   YTT++    +       NK  D+M+     P+ +TY  LI  +G+   + E  ++F
Sbjct: 362 DNVVYTTLIHGFFKLGHVRTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNLF 421

Query: 419 KQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKA 478
            +M   G +PD VTY TLID++ KAG +  A  ++ +M   G++P+  TY  +I+ L K 
Sbjct: 422 HEMISRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKH 481

Query: 479 GHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTY 538
           G L  A++L  EM  +G   N+  YN M+    KA N + A+KL ++M+ AG +PD +TY
Sbjct: 482 GELDTANELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITY 541

Query: 539 SIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQ 598
           + V++     G +D+A  +  EM  +   P    + +L++ +   G +         ML+
Sbjct: 542 TTVIDAYCRLGDIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLE 601

Query: 599 AGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYD 658
            G+ P+  T N+L+        ++    + + M N G+ P   TY +L+    +AR+  +
Sbjct: 602 KGIVPDAITYNTLMKQHCIRNSMNTTTKIYKRMRNQGVAPDSNTYNILIKGHCKARNLKE 661

Query: 659 MGFCHELMAVSGH 671
             F ++ M   G+
Sbjct: 662 AWFLYKEMIEKGY 674



 Score =  153 bits (387), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 86/300 (28%), Positives = 157/300 (52%), Gaps = 4/300 (1%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           G K DE TYTT++ +  +A +      L ++MV+ G  PN+VTY  LI    +   L+ A
Sbjct: 428 GLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTA 487

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
            ++  +M+  G + +   Y ++++   KAG ++ A+ + K+M+ AG+ PD  TY+ +I+ 
Sbjct: 488 NELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDA 547

Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPD 534
             + G +  AH+L  EM+++G  P +VT+N+++         +   +L   M   G  PD
Sbjct: 548 YCRLGDIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGIVPD 607

Query: 535 KVTYSIVMEVLGHC--GYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEW 592
            +TY+ +M+   HC    ++    ++  MR +   PD   Y +L+    KA N+++AW  
Sbjct: 608 AITYNTLMK--QHCIRNSMNTTTKIYKRMRNQGVAPDSNTYNILIKGHCKARNLKEAWFL 665

Query: 593 YEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTE 652
           Y+ M++ G  P V + N+L+  F +  ++ +A  L + M   GL    + Y   +  C E
Sbjct: 666 YKEMIEKGYVPTVTSYNALIKRFYKKKKILEARELFEEMRGHGLVADGEIYNFFVDMCYE 725



 Score =  153 bits (387), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 95/304 (31%), Positives = 155/304 (50%), Gaps = 11/304 (3%)

Query: 359 DEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVF 418
           D  +Y+T++       +     KL+D M   G +PN  TYN +I    +     EA  V 
Sbjct: 292 DVVSYSTVIDGYCHLGELKKALKLMDDMQIKGLKPNRYTYNSIILLLCKIGKSFEAEKVL 351

Query: 419 KQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKA 478
           ++M      PD V Y TLI    K G +  A   + +M +  +SPD  TY+ +I   G+ 
Sbjct: 352 REMMSQKIIPDNVVYTTLIHGFFKLGHVRTANKWFDEMLSKKISPDYITYTTLIQGFGQG 411

Query: 479 GHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTY 538
           G +     LF EM+++G  P+ VTY  +I +  KA    +A  L+ +M   G  P+ VTY
Sbjct: 412 GKVIEPQNLFHEMISRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTY 471

Query: 539 SIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQ 598
             +++ L   G LD A  +  EMR+K    +  +Y  +V+   KAGN+ +A +  + M  
Sbjct: 472 GALIDGLCKHGELDTANELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEV 531

Query: 599 AGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYD 658
           AG+ P+  T  +++ A+ R+G +  A+ LLQ ML+ GL+P++ T+ +L++          
Sbjct: 532 AGIDPDAITYTTVIDAYCRLGDIDKAHKLLQEMLDRGLQPTVVTFNVLMN---------- 581

Query: 659 MGFC 662
            GFC
Sbjct: 582 -GFC 584



 Score =  144 bits (364), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 87/294 (29%), Positives = 146/294 (49%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           G K + +TY +++ +L +  +     K+L +M+     P+ V Y  LIH + +  ++  A
Sbjct: 323 GLKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQKIIPDNVVYTTLIHGFFKLGHVRTA 382

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
              F +M      PD +TY TLI    + G +    +++ +M + GL PD  TY+ +I+ 
Sbjct: 383 NKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHEMISRGLKPDEVTYTTLIDV 442

Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPD 534
             KAG +  A  L  EMV  G  PN+VTY  +I    K     +A +L  +M+  G + +
Sbjct: 443 YCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTANELLDEMRKKGLQLN 502

Query: 535 KVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYE 594
              Y+ ++  +   G +++A  +  EM      PD   Y  ++D + + G++ KA +  +
Sbjct: 503 VCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAYCRLGDIDKAHKLLQ 562

Query: 595 AMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
            ML  GL+P V T N L++ F  +G L D   LL  ML  G+ P   TY  L+ 
Sbjct: 563 EMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGIVPDAITYNTLMK 616



 Score =  142 bits (358), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 78/251 (31%), Positives = 135/251 (53%), Gaps = 4/251 (1%)

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
           Q G   +  TY  ++  L +  +    N+LLD+M + G Q NV  YN +++   +A  + 
Sbjct: 461 QMGMTPNIVTYGALIDGLCKHGELDTANELLDEMRKKGLQLNVCIYNSMVNGICKAGNIE 520

Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
           +A+ + K+M+V G +PD +TY T+ID + + G +D A  + ++M   GL P   T++V++
Sbjct: 521 QAIKLMKEMEVAGIDPDAITYTTVIDAYCRLGDIDKAHKLLQEMLDRGLQPTVVTFNVLM 580

Query: 473 NCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFE 532
           N     G L+   +L   M+ +G +P+ +TYN ++       +  +  K+Y+ M+N G  
Sbjct: 581 NGFCMLGMLEDGDRLLGWMLEKGIVPDAITYNTLMKQHCIRNSMNTTTKIYKRMRNQGVA 640

Query: 533 PDKVTYSIVMEVLGHCGY--LDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAW 590
           PD  TY+I+++  GHC    L EA  ++ EM  K +VP    Y  L+  + K   + +A 
Sbjct: 641 PDSNTYNILIK--GHCKARNLKEAWFLYKEMIEKGYVPTVTSYNALIKRFYKKKKILEAR 698

Query: 591 EWYEAMLQAGL 601
           E +E M   GL
Sbjct: 699 ELFEEMRGHGL 709



 Score =  138 bits (348), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 82/254 (32%), Positives = 132/254 (51%)

Query: 390 GCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVA 449
           G   N  +YN +I+S  R   + EA  +  QM      PD V+Y T+ID +   G L  A
Sbjct: 253 GISWNTTSYNIIIYSLCRLGKVKEAHRLLMQMDFRSSTPDVVSYSTVIDGYCHLGELKKA 312

Query: 450 MDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIAL 509
           + +   MQ  GL P+ +TY+ II  L K G    A ++  EM++Q  IP+ V Y  +I  
Sbjct: 313 LKLMDDMQIKGLKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQKIIPDNVVYTTLIHG 372

Query: 510 QAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPD 569
             K  + ++A K + +M +    PD +TY+ +++  G  G + E + +F EM  +   PD
Sbjct: 373 FFKLGHVRTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHEMISRGLKPD 432

Query: 570 EPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQ 629
           E  Y  L+D++ KAG +  A+  +  M+Q G+ PN+ T  +L+    + G+L  A  LL 
Sbjct: 433 EVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTANELLD 492

Query: 630 GMLNLGLKPSLQTY 643
            M   GL+ ++  Y
Sbjct: 493 EMRKKGLQLNVCIY 506



 Score =  123 bits (309), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 113/500 (22%), Positives = 218/500 (43%), Gaps = 52/500 (10%)

Query: 339 DHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFG---AINKLLDQMVRDGCQPNV 395
           D+ + L FF+W R +     +       + ++    +       +  L+  +  G +   
Sbjct: 115 DYNLVLAFFDWARVRREPSLEARCIIIHIAVVSNDLRLAHELVHDYFLNSKLEIGVKMTQ 174

Query: 396 VTYNRLIHSYGRANYLNEALDVFKQMQV-VGCEPDR-------VTYCTLIDIHAKAGFLD 447
            T+ RLI++Y        A D+F Q+ V +G   +        ++Y  ++ + +   FL 
Sbjct: 175 FTH-RLIYTYKYWGPNPIAFDIFFQVLVEIGHLSEARKLLDKLLSYGLVVTVDSCNAFLS 233

Query: 448 VAMDMYKKMQAA-------GLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNL 500
              +  + ++ A       G+S +T +Y++II  L + G ++ AH+L  +M  +   P++
Sbjct: 234 RIANNSEGIEMAIKVFCEYGISWNTTSYNIIIYSLCRLGKVKEAHRLLMQMDFRSSTPDV 293

Query: 501 VTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAE 560
           V+Y+ +I         + ALKL  DMQ  G +P++ TY+ ++ +L   G   EAE V  E
Sbjct: 294 VSYSTVIDGYCHLGELKKALKLMDDMQIKGLKPNRYTYNSIILLLCKIGKSFEAEKVLRE 353

Query: 561 MRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQ 620
           M  +  +PD  VY  L+  + K G+VR A +W++ ML   + P+  T  +L+  F + G+
Sbjct: 354 MMSQKIIPDNVVYTTLIHGFFKLGHVRTANKWFDEMLSKKISPDYITYTTLIQGFGQGGK 413

Query: 621 LSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGFCHELMAVSGHPAHMFLLSM 680
           + +  +L   M++ GLKP   TYT L+    +A    +    H  M   G   ++     
Sbjct: 414 VIEPQNLFHEMISRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGA 473

Query: 681 PSPGPDGQNVRDHVGSFLEMMHSEDRESKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKN 740
              G       D     L+ M  +  +    + +++V+ + K+G  E+A  + +      
Sbjct: 474 LIDGLCKHGELDTANELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAG 533

Query: 741 VYPDAVK-------------------------EKGMSYWLINLHVMSDGTAVIAL----S 771
           + PDA+                          ++G+   ++  +V+ +G  ++ +     
Sbjct: 534 IDPDAITYTTVIDAYCRLGDIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGD 593

Query: 772 RTLAWFRKQMLISGVGPSRI 791
           R L W    ML  G+ P  I
Sbjct: 594 RLLGW----MLEKGIVPDAI 609



 Score =  102 bits (254), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 58/191 (30%), Positives = 100/191 (52%)

Query: 354 AGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNE 413
           AG   D  TYTT++    R       +KLL +M+  G QP VVT+N L++ +     L +
Sbjct: 532 AGIDPDAITYTTVIDAYCRLGDIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLED 591

Query: 414 ALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIIN 473
              +   M   G  PD +TY TL+  H     ++    +YK+M+  G++PD+ TY+++I 
Sbjct: 592 GDRLLGWMLEKGIVPDAITYNTLMKQHCIRNSMNTTTKIYKRMRNQGVAPDSNTYNILIK 651

Query: 474 CLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEP 533
              KA +L+ A  L+ EM+ +G +P + +YN +I    K +    A +L+ +M+  G   
Sbjct: 652 GHCKARNLKEAWFLYKEMIEKGYVPTVTSYNALIKRFYKKKKILEARELFEEMRGHGLVA 711

Query: 534 DKVTYSIVMEV 544
           D   Y+  +++
Sbjct: 712 DGEIYNFFVDM 722



 Score = 72.0 bits (175), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 58/235 (24%), Positives = 109/235 (46%), Gaps = 23/235 (9%)

Query: 295 GNVVESVSRILRQWKWGPLAEEALGNTNYSMDAY-------QANQVLKQLQDHTVALGFF 347
           GN+ +++ +++++ +   +  +A+  T   +DAY       +A+++L+++ D  +     
Sbjct: 517 GNIEQAI-KLMKEMEVAGIDPDAITYTT-VIDAYCRLGDIDKAHKLLQEMLDRGLQPTVV 574

Query: 348 NWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGR 407
            +     GF         M+G+L         ++LL  M+  G  P+ +TYN L+  +  
Sbjct: 575 TFNVLMNGF--------CMLGMLEDG------DRLLGWMLEKGIVPDAITYNTLMKQHCI 620

Query: 408 ANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFT 467
            N +N    ++K+M+  G  PD  TY  LI  H KA  L  A  +YK+M   G  P   +
Sbjct: 621 RNSMNTTTKIYKRMRNQGVAPDSNTYNILIKGHCKARNLKEAWFLYKEMIEKGYVPTVTS 680

Query: 468 YSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKL 522
           Y+ +I    K   +  A +LF EM   G + +   YN  + +  +  + +  L L
Sbjct: 681 YNALIKRFYKKKKILEARELFEEMRGHGLVADGEIYNFFVDMCYEEGDVEITLNL 735



 Score = 51.2 bits (121), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 43/167 (25%), Positives = 74/167 (44%), Gaps = 5/167 (2%)

Query: 333 VLKQLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQ 392
           +L  L+D    LG   W+  + G   D  TY T++             K+  +M   G  
Sbjct: 585 MLGMLEDGDRLLG---WML-EKGIVPDAITYNTLMKQHCIRNSMNTTTKIYKRMRNQGVA 640

Query: 393 PNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDM 452
           P+  TYN LI  + +A  L EA  ++K+M   G  P   +Y  LI    K   +  A ++
Sbjct: 641 PDSNTYNILIKGHCKARNLKEAWFLYKEMIEKGYVPTVTSYNALIKRFYKKKKILEAREL 700

Query: 453 YKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPN 499
           +++M+  GL  D   Y+  ++   + G ++    L C+   + C+ N
Sbjct: 701 FEEMRGHGLVADGEIYNFFVDMCYEEGDVEITLNL-CDEAIEKCLLN 746


>gi|302783901|ref|XP_002973723.1| hypothetical protein SELMODRAFT_99426 [Selaginella moellendorffii]
 gi|300158761|gb|EFJ25383.1| hypothetical protein SELMODRAFT_99426 [Selaginella moellendorffii]
          Length = 581

 Score =  157 bits (396), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 113/445 (25%), Positives = 198/445 (44%), Gaps = 65/445 (14%)

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
           + GF+ D  TY+T++  L +  +     +++++M   G  P+V TY  ++    RA  ++
Sbjct: 3   EKGFEPDVVTYSTIISGLCKTGKVTEALEMVEEMTEKGVNPDVATYTIIVDRLCRAGKVD 62

Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
           EA ++F +M   GC  + V Y  LI+   K   ++ A  + ++M + G  PD  TY+ I+
Sbjct: 63  EADELFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYEPDNITYNTIL 122

Query: 473 NCLGKAGHLQAAHQLF-------------------------------------CEMVNQG 495
           + L + G +  A Q F                                      +M ++ 
Sbjct: 123 SGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKVAEAWGLFKTMDMADRK 182

Query: 496 CIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAE 555
             P+L+TYN +I    +      A+KL++D+   G+ PD VTY+ ++  L     +DEAE
Sbjct: 183 VAPDLITYNTLIDGFCRVEKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDEAE 242

Query: 556 AVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAF 615
            +F +M      P+   Y +++    + GN+ +  E YE M +    P+V  CN+++   
Sbjct: 243 EMFKKMVDSGCAPNGATYSIVLSGHCRVGNMARCLELYEEMTEKRFSPDVLLCNAVIDML 302

Query: 616 LRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGFCHELMAVSGHPAHM 675
            +  ++ DA+ +L+ M  +G  P + TY +LL            G C   +      AH 
Sbjct: 303 CKAKKVDDAHKVLEEMSKIGAVPDVVTYNILLD-----------GLCKTNLV---DKAHE 348

Query: 676 FLLSMPSPG--PDGQNVRDHVGSFLEM--MHSE----DRESKRGLVDAVVDF------LH 721
              +M   G  PD  +    +    +   +H      DR  +R LV  VV F      L 
Sbjct: 349 LFSTMVDNGCAPDIVSYSVVLNGLCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGLC 408

Query: 722 KSGLKEEAGSVWEVAAQKNVYPDAV 746
           K+G  +EA  + +V ++ NV PD V
Sbjct: 409 KAGKLDEAKDLLDVMSEHNVLPDGV 433



 Score =  149 bits (375), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 97/364 (26%), Positives = 172/364 (47%), Gaps = 20/364 (5%)

Query: 359 DEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVF 418
           D  TY T++    R  +     KL   ++  G  P+ VTYN ++    R + ++EA ++F
Sbjct: 186 DLITYNTLIDGFCRVEKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDEAEEMF 245

Query: 419 KQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKA 478
           K+M   GC P+  TY  ++  H + G +   +++Y++M     SPD    + +I+ L KA
Sbjct: 246 KKMVDSGCAPNGATYSIVLSGHCRVGNMARCLELYEEMTEKRFSPDVLLCNAVIDMLCKA 305

Query: 479 GHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTY 538
             +  AH++  EM   G +P++VTYNI++    K      A +L+  M + G  PD V+Y
Sbjct: 306 KKVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVSY 365

Query: 539 SIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQ 598
           S+V+  L     + +A  +F  M  +  VPD   + +L+D   KAG + +A +  + M +
Sbjct: 366 SVVLNGLCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEAKDLLDVMSE 425

Query: 599 AGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYD 658
             + P+  TC +L+    R  +  +A  L Q M+  G    +  + ++L+          
Sbjct: 426 HNVLPDGVTCTTLMHGLCRDKRTDEAVRLFQYMVEKGTVADVLPHNIVLA---------- 475

Query: 659 MGFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRESKRGLVDAVVD 718
            G C E     G  A   L        DG+   D V ++  ++++     + G VD  VD
Sbjct: 476 -GLCRE-----GKLAQALLFFKSMVKSDGEFSPDVV-TYTTLVNA---LIEAGRVDQAVD 525

Query: 719 FLHK 722
           +  +
Sbjct: 526 YFQQ 529



 Score =  138 bits (348), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 95/339 (28%), Positives = 154/339 (45%), Gaps = 38/339 (11%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           G++ D  TY T++  L R  +     +  D M   G  P+VV YN L+ +  +   + EA
Sbjct: 110 GYEPDNITYNTILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKVAEA 169

Query: 415 LDVFKQMQVVG--CEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
             +FK M +      PD +TY TLID   +    D AM ++K + A G  PDT TY+ I+
Sbjct: 170 WGLFKTMDMADRKVAPDLITYNTLIDGFCRVEKTDEAMKLFKDVIAKGYMPDTVTYNSIL 229

Query: 473 NCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFE 532
             L +  ++  A ++F +MV+ GC PN  TY+I+++   +  N    L+LY +M    F 
Sbjct: 230 LGLARKSNMDEAEEMFKKMVDSGCAPNGATYSIVLSGHCRVGNMARCLELYEEMTEKRFS 289

Query: 533 PDK-----------------------------------VTYSIVMEVLGHCGYLDEAEAV 557
           PD                                    VTY+I+++ L     +D+A  +
Sbjct: 290 PDVLLCNAVIDMLCKAKKVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHEL 349

Query: 558 FAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLR 617
           F+ M      PD   Y ++++   K   V  A   ++ M++  L P+V T N L+    +
Sbjct: 350 FSTMVDNGCAPDIVSYSVVLNGLCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGLCK 409

Query: 618 VGQLSDAYHLLQGMLNLGLKPSLQTYTLLL-SCCTEARS 655
            G+L +A  LL  M    + P   T T L+   C + R+
Sbjct: 410 AGKLDEAKDLLDVMSEHNVLPDGVTCTTLMHGLCRDKRT 448



 Score =  115 bits (288), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 76/283 (26%), Positives = 141/283 (49%), Gaps = 2/283 (0%)

Query: 356 FKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEAL 415
           F  D      ++ +L +A++    +K+L++M + G  P+VVTYN L+    + N +++A 
Sbjct: 288 FSPDVLLCNAVIDMLCKAKKVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAH 347

Query: 416 DVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCL 475
           ++F  M   GC PD V+Y  +++   K   +  A  ++ +M    L PD  T++++++ L
Sbjct: 348 ELFSTMVDNGCAPDIVSYSVVLNGLCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGL 407

Query: 476 GKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDK 535
            KAG L  A  L   M     +P+ VT   ++    + +    A++L++ M   G   D 
Sbjct: 408 CKAGKLDEAKDLLDVMSEHNVLPDGVTCTTLMHGLCRDKRTDEAVRLFQYMVEKGTVADV 467

Query: 536 VTYSIVMEVLGHCGYLDEAEAVFAEMRRKN--WVPDEPVYGLLVDLWGKAGNVRKAWEWY 593
           + ++IV+  L   G L +A   F  M + +  + PD   Y  LV+   +AG V +A +++
Sbjct: 468 LPHNIVLAGLCREGKLAQALLFFKSMVKSDGEFSPDVVTYTTLVNALIEAGRVDQAVDYF 527

Query: 594 EAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGL 636
           + M  +G  P+    N+L++   + G+   A  L Q M   G 
Sbjct: 528 QQMTGSGCAPDYVAYNTLMNGLRKQGRHIQADRLTQAMKEKGF 570



 Score = 75.1 bits (183), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 56/217 (25%), Positives = 99/217 (45%), Gaps = 2/217 (0%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           G   D  +Y+ ++  L +  +      L D+M+     P+VVT+N L+    +A  L+EA
Sbjct: 357 GCAPDIVSYSVVLNGLCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEA 416

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
            D+   M      PD VT  TL+    +    D A+ +++ M   G   D   +++++  
Sbjct: 417 KDLLDVMSEHNVLPDGVTCTTLMHGLCRDKRTDEAVRLFQYMVEKGTVADVLPHNIVLAG 476

Query: 475 LGKAGHLQAAHQLFCEMVNQG--CIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFE 532
           L + G L  A   F  MV       P++VTY  ++    +A     A+  ++ M  +G  
Sbjct: 477 LCREGKLAQALLFFKSMVKSDGEFSPDVVTYTTLVNALIEAGRVDQAVDYFQQMTGSGCA 536

Query: 533 PDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPD 569
           PD V Y+ +M  L   G   +A+ +   M+ K ++ D
Sbjct: 537 PDYVAYNTLMNGLRKQGRHIQADRLTQAMKEKGFLSD 573



 Score = 48.5 bits (114), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 27/74 (36%), Positives = 41/74 (55%)

Query: 393 PNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDM 452
           P+VVTY  L+++   A  +++A+D F+QM   GC PD V Y TL++   K G    A  +
Sbjct: 502 PDVVTYTTLVNALIEAGRVDQAVDYFQQMTGSGCAPDYVAYNTLMNGLRKQGRHIQADRL 561

Query: 453 YKKMQAAGLSPDTF 466
            + M+  G   D F
Sbjct: 562 TQAMKEKGFLSDCF 575


>gi|334183602|ref|NP_176522.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|193806282|sp|Q9C8T7.2|PP101_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g63330
 gi|332195966|gb|AEE34087.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 559

 Score =  157 bits (396), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 90/297 (30%), Positives = 156/297 (52%), Gaps = 4/297 (1%)

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
           + G++ D  T+TT++  L    +      L+D+MV+ GCQPN+VTY  +++   +   ++
Sbjct: 108 EMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDID 167

Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
            A ++  +M+    E D V + T+ID   K   +D A++++K+M+  G+ P+  TYS +I
Sbjct: 168 LAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLI 227

Query: 473 NCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFE 532
           +CL   G    A QL  +M+ +   PNLVT+N +I    K   +  A KL+ DM     +
Sbjct: 228 SCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSID 287

Query: 533 PDKVTYSIVMEVLGHCGY--LDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAW 590
           PD  TY+ ++   G C +  LD+A+ +F  M  K+  PD   Y  L+  + K+  V    
Sbjct: 288 PDIFTYNSLIN--GFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGT 345

Query: 591 EWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
           E +  M   GL  +  T  +L+      G   +A  + + M++ G+ P + TY++LL
Sbjct: 346 ELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILL 402



 Score =  145 bits (365), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 98/344 (28%), Positives = 162/344 (47%), Gaps = 22/344 (6%)

Query: 347 FNWLRRQ--AGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIH- 403
           FN L +   A  + D   + T++  L + R       L  +M   G +PNVVTY+ LI  
Sbjct: 170 FNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISC 229

Query: 404 --SYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGL 461
             SYGR    ++A  +   M      P+ VT+  LID   K G    A  ++  M    +
Sbjct: 230 LCSYGR---WSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSI 286

Query: 462 SPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALK 521
            PD FTY+ +IN       L  A Q+F  MV++ C P+L TYN +I    K++  +   +
Sbjct: 287 DPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTE 346

Query: 522 LYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWG 581
           L+R+M + G   D VTY+ +++ L H G  D A+ VF +M      PD   Y +L+D   
Sbjct: 347 LFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLC 406

Query: 582 KAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQ 641
             G + KA E ++ M ++ ++ ++    +++    + G++ D + L   +   G+KP++ 
Sbjct: 407 NNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVV 466

Query: 642 TYTLLLSCCTEARSPYDMGFCHELMAVSGHPAHMFLLSMPSPGP 685
           TY  ++S           G C + +      A+  L  M   GP
Sbjct: 467 TYNTMIS-----------GLCSKRLL---QEAYALLKKMKEDGP 496



 Score =  139 bits (350), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 86/307 (28%), Positives = 155/307 (50%), Gaps = 7/307 (2%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           ++ G  H+ +TY  ++    R  Q      LL +M++ G +P++VT + L++ Y     +
Sbjct: 37  QRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRI 96

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLID---IHAKAGFLDVAMDMYKKMQAAGLSPDTFTY 468
           ++A+ +  QM  +G  PD +T+ TLI    +H KA     A+ +  +M   G  P+  TY
Sbjct: 97  SDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKAS---EAVALVDRMVQRGCQPNLVTY 153

Query: 469 SVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQN 528
            V++N L K G +  A  L  +M       ++V +N +I    K R+   AL L+++M+ 
Sbjct: 154 GVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMET 213

Query: 529 AGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRK 588
            G  P+ VTYS ++  L   G   +A  + ++M  K   P+   +  L+D + K G   +
Sbjct: 214 KGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVE 273

Query: 589 AWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTY-TLLL 647
           A + ++ M++  + P++ T NSL++ F    +L  A  + + M++    P L TY TL+ 
Sbjct: 274 AEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIK 333

Query: 648 SCCTEAR 654
             C   R
Sbjct: 334 GFCKSKR 340



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 98/393 (24%), Positives = 184/393 (46%), Gaps = 12/393 (3%)

Query: 382 LLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHA 441
           L+DQMV  G +P+ +T+  LIH     N  +EA+ +  +M   GC+P+ VTY  +++   
Sbjct: 102 LVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLC 161

Query: 442 KAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLV 501
           K G +D+A ++  KM+AA +  D   ++ II+ L K  H+  A  LF EM  +G  PN+V
Sbjct: 162 KRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVV 221

Query: 502 TYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEM 561
           TY+ +I+       +  A +L  DM      P+ VT++ +++     G   EAE +  +M
Sbjct: 222 TYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDM 281

Query: 562 RRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQL 621
            +++  PD   Y  L++ +     + KA + +E M+     P++ T N+L+  F +  ++
Sbjct: 282 IKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRV 341

Query: 622 SDAYHLLQGMLNLGLKPSLQTYTLLLSC------CTEARSPYDMGFCHELMAVSGHPAHM 675
            D   L + M + GL     TYT L+        C  A+  +      + M   G P  +
Sbjct: 342 EDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVF------KQMVSDGVPPDI 395

Query: 676 FLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRESKRGLVDAVVDFLHKSGLKEEAGSVWEV 735
              S+   G       +      + M   + +    +   +++ + K+G  ++   ++  
Sbjct: 396 MTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCS 455

Query: 736 AAQKNVYPDAVKEKGMSYWLINLHVMSDGTAVI 768
            + K V P+ V    M   L +  ++ +  A++
Sbjct: 456 LSLKGVKPNVVTYNTMISGLCSKRLLQEAYALL 488



 Score =  135 bits (339), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 88/305 (28%), Positives = 155/305 (50%), Gaps = 1/305 (0%)

Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLI 402
           AL  F  +  + G + +  TY++++  L    ++   ++LL  M+     PN+VT+N LI
Sbjct: 204 ALNLFKEMETK-GIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALI 262

Query: 403 HSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLS 462
            ++ +     EA  +   M     +PD  TY +LI+       LD A  M++ M +    
Sbjct: 263 DAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCF 322

Query: 463 PDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKL 522
           PD  TY+ +I    K+  ++   +LF EM ++G + + VTY  +I       +  +A K+
Sbjct: 323 PDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKV 382

Query: 523 YRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGK 582
           ++ M + G  PD +TYSI+++ L + G L++A  VF  M++     D  +Y  +++   K
Sbjct: 383 FKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCK 442

Query: 583 AGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQT 642
           AG V   W+ + ++   G++PNV T N+++S       L +AY LL+ M   G  P   T
Sbjct: 443 AGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGT 502

Query: 643 YTLLL 647
           Y  L+
Sbjct: 503 YNTLI 507



 Score =  131 bits (330), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 103/396 (26%), Positives = 176/396 (44%), Gaps = 24/396 (6%)

Query: 363 YTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQ 422
           +  ++  + + ++F  +  L ++M R G   N+ TYN LI+ + R + ++ AL +  +M 
Sbjct: 13  FNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMM 72

Query: 423 VVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQ 482
            +G EP  VT  +L++ +     +  A+ +  +M   G  PDT T++ +I+ L       
Sbjct: 73  KLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKAS 132

Query: 483 AAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVM 542
            A  L   MV +GC PNLVTY +++    K  +   A  L   M+ A  E D V ++ ++
Sbjct: 133 EAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTII 192

Query: 543 EVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLR 602
           + L    ++D+A  +F EM  K   P+   Y  L+      G    A +    M++  + 
Sbjct: 193 DSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKIN 252

Query: 603 PNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGFC 662
           PN+ T N+L+ AF++ G+  +A  L   M+   + P + TY  L++           GFC
Sbjct: 253 PNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLIN-----------GFC 301

Query: 663 HELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSED-----RE-SKRGLVDAV 716
                        F++S     PD       +  F +    ED     RE S RGLV   
Sbjct: 302 MHDRLDKAKQMFEFMVS-KDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDT 360

Query: 717 VDF------LHKSGLKEEAGSVWEVAAQKNVYPDAV 746
           V +      L   G  + A  V++      V PD +
Sbjct: 361 VTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIM 396



 Score =  114 bits (286), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 70/270 (25%), Positives = 136/270 (50%)

Query: 362 TYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQM 421
           T+  ++    +  +F    KL D M++    P++ TYN LI+ +   + L++A  +F+ M
Sbjct: 257 TFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFM 316

Query: 422 QVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHL 481
               C PD  TY TLI    K+  ++   +++++M   GL  DT TY+ +I  L   G  
Sbjct: 317 VSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDC 376

Query: 482 QAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIV 541
             A ++F +MV+ G  P+++TY+I++         + AL+++  MQ +  + D   Y+ +
Sbjct: 377 DNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTM 436

Query: 542 MEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGL 601
           +E +   G +D+   +F  +  K   P+   Y  ++        +++A+   + M + G 
Sbjct: 437 IEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGP 496

Query: 602 RPNVPTCNSLLSAFLRVGQLSDAYHLLQGM 631
            P+  T N+L+ A LR G  + +  L++ M
Sbjct: 497 LPDSGTYNTLIRAHLRDGDKAASAELIREM 526



 Score =  102 bits (253), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 66/222 (29%), Positives = 105/222 (47%)

Query: 359 DEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVF 418
           D  TY T++    ++++     +L  +M   G   + VTY  LI         + A  VF
Sbjct: 324 DLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVF 383

Query: 419 KQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKA 478
           KQM   G  PD +TY  L+D     G L+ A++++  MQ + +  D + Y+ +I  + KA
Sbjct: 384 KQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKA 443

Query: 479 GHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTY 538
           G +     LFC +  +G  PN+VTYN MI+     R  Q A  L + M+  G  PD  TY
Sbjct: 444 GKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTY 503

Query: 539 SIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLW 580
           + ++      G    +  +  EMR   +V D    GL+ ++ 
Sbjct: 504 NTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLVANML 545



 Score = 98.2 bits (243), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 58/228 (25%), Positives = 114/228 (50%), Gaps = 1/228 (0%)

Query: 428 PDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQL 487
           P    +  L+   AK    D+ + + +KMQ  G+S + +TY+++INC  +   +  A  L
Sbjct: 8   PSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALAL 67

Query: 488 FCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGH 547
             +M+  G  P++VT + ++      +    A+ L   M   G+ PD +T++ ++  L  
Sbjct: 68  LGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFL 127

Query: 548 CGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPT 607
                EA A+   M ++   P+   YG++V+   K G++  A+     M  A +  +V  
Sbjct: 128 HNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVI 187

Query: 608 CNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSC-CTEAR 654
            N+++ +  +   + DA +L + M   G++P++ TY+ L+SC C+  R
Sbjct: 188 FNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGR 235



 Score = 92.8 bits (229), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 62/200 (31%), Positives = 101/200 (50%), Gaps = 1/200 (0%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           G   D  TYTT++  L          K+  QMV DG  P+++TY+ L+        L +A
Sbjct: 355 GLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKA 414

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
           L+VF  MQ    + D   Y T+I+   KAG +D   D++  +   G+ P+  TY+ +I+ 
Sbjct: 415 LEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISG 474

Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPD 534
           L     LQ A+ L  +M   G +P+  TYN +I    +  +  ++ +L R+M++  F  D
Sbjct: 475 LCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGD 534

Query: 535 KVTYSIVMEVLGHCGYLDEA 554
             T  +V  +L H G LD++
Sbjct: 535 ASTIGLVANML-HDGRLDKS 553



 Score = 56.6 bits (135), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 37/171 (21%), Positives = 78/171 (45%), Gaps = 1/171 (0%)

Query: 491 MVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGY 550
           MV    +P++  +N +++  AK + +   + L   MQ  G   +  TY+I++        
Sbjct: 1   MVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQ 60

Query: 551 LDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNS 610
           +  A A+  +M +  + P       L++ +     +  A    + M++ G RP+  T  +
Sbjct: 61  ISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTT 120

Query: 611 LLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGF 661
           L+       + S+A  L+  M+  G +P+L TY ++++   + R   D+ F
Sbjct: 121 LIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCK-RGDIDLAF 170


>gi|12324362|gb|AAG52154.1|AC022355_15 unknown protein; 19199-17308 [Arabidopsis thaliana]
          Length = 558

 Score =  157 bits (396), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 90/297 (30%), Positives = 156/297 (52%), Gaps = 4/297 (1%)

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
           + G++ D  T+TT++  L    +      L+D+MV+ GCQPN+VTY  +++   +   ++
Sbjct: 107 EMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDID 166

Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
            A ++  +M+    E D V + T+ID   K   +D A++++K+M+  G+ P+  TYS +I
Sbjct: 167 LAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLI 226

Query: 473 NCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFE 532
           +CL   G    A QL  +M+ +   PNLVT+N +I    K   +  A KL+ DM     +
Sbjct: 227 SCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSID 286

Query: 533 PDKVTYSIVMEVLGHCGY--LDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAW 590
           PD  TY+ ++   G C +  LD+A+ +F  M  K+  PD   Y  L+  + K+  V    
Sbjct: 287 PDIFTYNSLIN--GFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGT 344

Query: 591 EWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
           E +  M   GL  +  T  +L+      G   +A  + + M++ G+ P + TY++LL
Sbjct: 345 ELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILL 401



 Score =  145 bits (365), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 98/344 (28%), Positives = 162/344 (47%), Gaps = 22/344 (6%)

Query: 347 FNWLRRQ--AGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIH- 403
           FN L +   A  + D   + T++  L + R       L  +M   G +PNVVTY+ LI  
Sbjct: 169 FNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISC 228

Query: 404 --SYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGL 461
             SYGR    ++A  +   M      P+ VT+  LID   K G    A  ++  M    +
Sbjct: 229 LCSYGR---WSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSI 285

Query: 462 SPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALK 521
            PD FTY+ +IN       L  A Q+F  MV++ C P+L TYN +I    K++  +   +
Sbjct: 286 DPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTE 345

Query: 522 LYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWG 581
           L+R+M + G   D VTY+ +++ L H G  D A+ VF +M      PD   Y +L+D   
Sbjct: 346 LFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLC 405

Query: 582 KAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQ 641
             G + KA E ++ M ++ ++ ++    +++    + G++ D + L   +   G+KP++ 
Sbjct: 406 NNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVV 465

Query: 642 TYTLLLSCCTEARSPYDMGFCHELMAVSGHPAHMFLLSMPSPGP 685
           TY  ++S           G C + +      A+  L  M   GP
Sbjct: 466 TYNTMIS-----------GLCSKRLL---QEAYALLKKMKEDGP 495



 Score =  137 bits (345), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 98/393 (24%), Positives = 184/393 (46%), Gaps = 12/393 (3%)

Query: 382 LLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHA 441
           L+DQMV  G +P+ +T+  LIH     N  +EA+ +  +M   GC+P+ VTY  +++   
Sbjct: 101 LVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLC 160

Query: 442 KAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLV 501
           K G +D+A ++  KM+AA +  D   ++ II+ L K  H+  A  LF EM  +G  PN+V
Sbjct: 161 KRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVV 220

Query: 502 TYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEM 561
           TY+ +I+       +  A +L  DM      P+ VT++ +++     G   EAE +  +M
Sbjct: 221 TYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDM 280

Query: 562 RRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQL 621
            +++  PD   Y  L++ +     + KA + +E M+     P++ T N+L+  F +  ++
Sbjct: 281 IKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRV 340

Query: 622 SDAYHLLQGMLNLGLKPSLQTYTLLLSC------CTEARSPYDMGFCHELMAVSGHPAHM 675
            D   L + M + GL     TYT L+        C  A+  +      + M   G P  +
Sbjct: 341 EDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVF------KQMVSDGVPPDI 394

Query: 676 FLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRESKRGLVDAVVDFLHKSGLKEEAGSVWEV 735
              S+   G       +      + M   + +    +   +++ + K+G  ++   ++  
Sbjct: 395 MTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCS 454

Query: 736 AAQKNVYPDAVKEKGMSYWLINLHVMSDGTAVI 768
            + K V P+ V    M   L +  ++ +  A++
Sbjct: 455 LSLKGVKPNVVTYNTMISGLCSKRLLQEAYALL 487



 Score =  135 bits (340), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 88/305 (28%), Positives = 155/305 (50%), Gaps = 1/305 (0%)

Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLI 402
           AL  F  +  + G + +  TY++++  L    ++   ++LL  M+     PN+VT+N LI
Sbjct: 203 ALNLFKEMETK-GIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALI 261

Query: 403 HSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLS 462
            ++ +     EA  +   M     +PD  TY +LI+       LD A  M++ M +    
Sbjct: 262 DAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCF 321

Query: 463 PDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKL 522
           PD  TY+ +I    K+  ++   +LF EM ++G + + VTY  +I       +  +A K+
Sbjct: 322 PDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKV 381

Query: 523 YRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGK 582
           ++ M + G  PD +TYSI+++ L + G L++A  VF  M++     D  +Y  +++   K
Sbjct: 382 FKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCK 441

Query: 583 AGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQT 642
           AG V   W+ + ++   G++PNV T N+++S       L +AY LL+ M   G  P   T
Sbjct: 442 AGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGT 501

Query: 643 YTLLL 647
           Y  L+
Sbjct: 502 YNTLI 506



 Score =  115 bits (287), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 70/270 (25%), Positives = 136/270 (50%)

Query: 362 TYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQM 421
           T+  ++    +  +F    KL D M++    P++ TYN LI+ +   + L++A  +F+ M
Sbjct: 256 TFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFM 315

Query: 422 QVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHL 481
               C PD  TY TLI    K+  ++   +++++M   GL  DT TY+ +I  L   G  
Sbjct: 316 VSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDC 375

Query: 482 QAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIV 541
             A ++F +MV+ G  P+++TY+I++         + AL+++  MQ +  + D   Y+ +
Sbjct: 376 DNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTM 435

Query: 542 MEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGL 601
           +E +   G +D+   +F  +  K   P+   Y  ++        +++A+   + M + G 
Sbjct: 436 IEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGP 495

Query: 602 RPNVPTCNSLLSAFLRVGQLSDAYHLLQGM 631
            P+  T N+L+ A LR G  + +  L++ M
Sbjct: 496 LPDSGTYNTLIRAHLRDGDKAASAELIREM 525



 Score =  114 bits (284), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 96/379 (25%), Positives = 163/379 (43%), Gaps = 26/379 (6%)

Query: 382 LLDQMVRDGCQPNVVTYNRLIHSYGRANYLNE--ALDVFKQMQVVGCEPDRVTYCTLIDI 439
           L   MV+    P++  +N+L+ +  +    +   +L +  +M  +G EP  VT  +L++ 
Sbjct: 29  LFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLALLGKMMKLGYEPSIVTLSSLLNG 88

Query: 440 HAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPN 499
           +     +  A+ +  +M   G  PDT T++ +I+ L        A  L   MV +GC PN
Sbjct: 89  YCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPN 148

Query: 500 LVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFA 559
           LVTY +++    K  +   A  L   M+ A  E D V ++ +++ L    ++D+A  +F 
Sbjct: 149 LVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFK 208

Query: 560 EMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVG 619
           EM  K   P+   Y  L+      G    A +    M++  + PN+ T N+L+ AF++ G
Sbjct: 209 EMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEG 268

Query: 620 QLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGFCHELMAVSGHPAHMFLLS 679
           +  +A  L   M+   + P + TY  L++           GFC             F++S
Sbjct: 269 KFVEAEKLHDDMIKRSIDPDIFTYNSLIN-----------GFCMHDRLDKAKQMFEFMVS 317

Query: 680 MPSPGPDGQNVRDHVGSFLEMMHSED-----RE-SKRGLVDAVVDF------LHKSGLKE 727
                PD       +  F +    ED     RE S RGLV   V +      L   G  +
Sbjct: 318 -KDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCD 376

Query: 728 EAGSVWEVAAQKNVYPDAV 746
            A  V++      V PD +
Sbjct: 377 NAQKVFKQMVSDGVPPDIM 395



 Score =  102 bits (254), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 66/221 (29%), Positives = 105/221 (47%)

Query: 359 DEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVF 418
           D  TY T++    ++++     +L  +M   G   + VTY  LI         + A  VF
Sbjct: 323 DLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVF 382

Query: 419 KQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKA 478
           KQM   G  PD +TY  L+D     G L+ A++++  MQ + +  D + Y+ +I  + KA
Sbjct: 383 KQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKA 442

Query: 479 GHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTY 538
           G +     LFC +  +G  PN+VTYN MI+     R  Q A  L + M+  G  PD  TY
Sbjct: 443 GKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTY 502

Query: 539 SIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDL 579
           + ++      G    +  +  EMR   +V D    GL+ ++
Sbjct: 503 NTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLVANM 543



 Score = 93.6 bits (231), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 62/200 (31%), Positives = 101/200 (50%), Gaps = 1/200 (0%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           G   D  TYTT++  L          K+  QMV DG  P+++TY+ L+        L +A
Sbjct: 354 GLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKA 413

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
           L+VF  MQ    + D   Y T+I+   KAG +D   D++  +   G+ P+  TY+ +I+ 
Sbjct: 414 LEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISG 473

Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPD 534
           L     LQ A+ L  +M   G +P+  TYN +I    +  +  ++ +L R+M++  F  D
Sbjct: 474 LCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGD 533

Query: 535 KVTYSIVMEVLGHCGYLDEA 554
             T  +V  +L H G LD++
Sbjct: 534 ASTIGLVANML-HDGRLDKS 552


>gi|115472657|ref|NP_001059927.1| Os07g0548300 [Oryza sativa Japonica Group]
 gi|28564790|dbj|BAC57720.1| putative crp1 protein [Oryza sativa Japonica Group]
 gi|113611463|dbj|BAF21841.1| Os07g0548300 [Oryza sativa Japonica Group]
          Length = 661

 Score =  157 bits (396), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 93/318 (29%), Positives = 152/318 (47%)

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
           Q G   DE TY+ +V    RA ++ +   LL +M  DG +P+   ++R++  +       
Sbjct: 320 QCGVAPDEATYSLLVDAYTRAGRWESARILLKEMEADGVKPSSYVFSRILAGFRDRGEWQ 379

Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
           +A  V ++M   G  PDR  Y  +ID   K   L  AMD + +M+  G+ PD  T++ +I
Sbjct: 380 KAFAVLREMHASGVRPDRHFYNVMIDTFGKYNCLGHAMDAFDRMREEGIEPDVVTWNTLI 439

Query: 473 NCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFE 532
           +   K G    A +LF EM    C     TYNIMI L  + + ++    +  +M+  G  
Sbjct: 440 DAHCKGGRHDRAIELFDEMRESNCPLGTTTYNIMINLLGEEQRWEGVEAMLAEMKEQGLV 499

Query: 533 PDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEW 592
           P+ +TY+ +++V G  G   EA      M+     P   +Y  LV+ + + G    A   
Sbjct: 500 PNIITYTTLVDVYGRSGRFKEAVDCIEAMKADGLKPSPTMYHALVNAYAQRGLADHALNV 559

Query: 593 YEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTE 652
            +AM   GL  +    NSL++AF    ++++A+ +LQ M   GL+P + TYT L+     
Sbjct: 560 VKAMRADGLEASTVVLNSLINAFGEDRRIAEAFSVLQFMKENGLRPDVITYTTLMKALIR 619

Query: 653 ARSPYDMGFCHELMAVSG 670
                 +   +E M  SG
Sbjct: 620 VEQFEKVPVIYEEMITSG 637



 Score =  137 bits (344), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 111/472 (23%), Positives = 194/472 (41%), Gaps = 71/472 (15%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDG-CQPNVVTYNRLIHSYGRANYLNE 413
           G     +  T ++  LG AR+      L  +    G  +P    YN L+  Y +   L  
Sbjct: 251 GLTPRSNAVTALISSLGSARRVAEAEALFLEFFLAGEIKPRTRAYNALLKGYVKIGSLKN 310

Query: 414 ALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIIN 473
           A  V  +M   G  PD  TY  L+D + +AG  + A  + K+M+A G+ P ++ +S I+ 
Sbjct: 311 AEQVLDEMSQCGVAPDEATYSLLVDAYTRAGRWESARILLKEMEADGVKPSSYVFSRILA 370

Query: 474 CLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEP 533
                G  Q A  +  EM   G  P+   YN+MI    K      A+  +  M+  G EP
Sbjct: 371 GFRDRGEWQKAFAVLREMHASGVRPDRHFYNVMIDTFGKYNCLGHAMDAFDRMREEGIEP 430

Query: 534 DKVTYSIVMEVLGHC--GYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWE 591
           D VT++ +++   HC  G  D A  +F EMR  N       Y ++++L G+     + WE
Sbjct: 431 DVVTWNTLID--AHCKGGRHDRAIELFDEMRESNCPLGTTTYNIMINLLGE----EQRWE 484

Query: 592 WYEAML----QAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
             EAML    + GL PN+ T  +L+  + R G+  +A   ++ M   GLKPS   Y  L+
Sbjct: 485 GVEAMLAEMKEQGLVPNIITYTTLVDVYGRSGRFKEAVDCIEAMKADGLKPSPTMYHALV 544

Query: 648 SCCTEARSPYDMGFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRE 707
           +   +                                   + + DH  + ++ M ++  E
Sbjct: 545 NAYAQ-----------------------------------RGLADHALNVVKAMRADGLE 569

Query: 708 SKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAVKEKGMSYWLINLHVMSDGTAV 767
           +   +++++++   +     EA SV +   +  + PD +    +   LI +        +
Sbjct: 570 ASTVVLNSLINAFGEDRRIAEAFSVLQFMKENGLRPDVITYTTLMKALIRVEQFEKVPVI 629

Query: 768 IALSRTLAWFRKQMLISGVGPSRIDIVTGWGRRSRVTGTSLVRQAVQELLHM 819
                      ++M+ SG  P R                +++R A++ + HM
Sbjct: 630 Y----------EEMITSGCAPDR-------------KARAMLRSALRYMKHM 658



 Score =  105 bits (261), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 83/370 (22%), Positives = 160/370 (43%), Gaps = 18/370 (4%)

Query: 237 VQPRSKAHSNRLNSNFKSNLQPSDAKVVECVSERFSKPSREMKIPAGLAPFSRHFASTGN 296
           ++PR++A+    N+  K  ++    K  E V +  S+         G+AP     A+   
Sbjct: 288 IKPRTRAY----NALLKGYVKIGSLKNAEQVLDEMSQ--------CGVAPDE---ATYSL 332

Query: 297 VVESVSRILRQWKWGPLAEEALGNTNYSMDAYQANQVLKQLQDHTVALGFFNWLRRQ--A 354
           +V++ +R  R W+   +  + +        +Y  +++L   +D       F  LR    +
Sbjct: 333 LVDAYTRAGR-WESARILLKEMEADGVKPSSYVFSRILAGFRDRGEWQKAFAVLREMHAS 391

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           G + D H Y  M+   G+    G      D+M  +G +P+VVT+N LI ++ +    + A
Sbjct: 392 GVRPDRHFYNVMIDTFGKYNCLGHAMDAFDRMREEGIEPDVVTWNTLIDAHCKGGRHDRA 451

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
           +++F +M+   C     TY  +I++  +    +    M  +M+  GL P+  TY+ +++ 
Sbjct: 452 IELFDEMRESNCPLGTTTYNIMINLLGEEQRWEGVEAMLAEMKEQGLVPNIITYTTLVDV 511

Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPD 534
            G++G  + A      M   G  P+   Y+ ++   A+      AL + + M+  G E  
Sbjct: 512 YGRSGRFKEAVDCIEAMKADGLKPSPTMYHALVNAYAQRGLADHALNVVKAMRADGLEAS 571

Query: 535 KVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYE 594
            V  + ++   G    + EA +V   M+     PD   Y  L+    +     K    YE
Sbjct: 572 TVVLNSLINAFGEDRRIAEAFSVLQFMKENGLRPDVITYTTLMKALIRVEQFEKVPVIYE 631

Query: 595 AMLQAGLRPN 604
            M+ +G  P+
Sbjct: 632 EMITSGCAPD 641



 Score = 53.9 bits (128), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 37/168 (22%), Positives = 71/168 (42%), Gaps = 35/168 (20%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           ++ G   +  TYTT+V + GR+ +F      ++ M  DG +P+   Y+ L+++Y +    
Sbjct: 494 KEQGLVPNIITYTTLVDVYGRSGRFKEAVDCIEAMKADGLKPSPTMYHALVNAYAQRGLA 553

Query: 412 NEALDVFKQMQVVGCE-----------------------------------PDRVTYCTL 436
           + AL+V K M+  G E                                   PD +TY TL
Sbjct: 554 DHALNVVKAMRADGLEASTVVLNSLINAFGEDRRIAEAFSVLQFMKENGLRPDVITYTTL 613

Query: 437 IDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAA 484
           +    +    +    +Y++M  +G +PD    +++ + L    H++ A
Sbjct: 614 MKALIRVEQFEKVPVIYEEMITSGCAPDRKARAMLRSALRYMKHMRVA 661



 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 54/254 (21%), Positives = 99/254 (38%), Gaps = 4/254 (1%)

Query: 497 IPNLVTYNIMIALQAKARNYQSA---LKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDE 553
           +P+L +Y+ ++A     R+   A    +L  D++ +  EPD   +S ++         D 
Sbjct: 180 LPDLASYSHLLASLLNTRDPPDAALLDRLLGDLRESRLEPDAPLFSDLISAFARARLPDA 239

Query: 554 AEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAG-LRPNVPTCNSLL 612
           A  + A  +     P       L+   G A  V +A   +     AG ++P     N+LL
Sbjct: 240 ALELLASAQAIGLTPRSNAVTALISSLGSARRVAEAEALFLEFFLAGEIKPRTRAYNALL 299

Query: 613 SAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGFCHELMAVSGHP 672
             ++++G L +A  +L  M   G+ P   TY+LL+   T A          + M   G  
Sbjct: 300 KGYVKIGSLKNAEQVLDEMSQCGVAPDEATYSLLVDAYTRAGRWESARILLKEMEADGVK 359

Query: 673 AHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRESKRGLVDAVVDFLHKSGLKEEAGSV 732
              ++ S    G   +       + L  MH+      R   + ++D   K      A   
Sbjct: 360 PSSYVFSRILAGFRDRGEWQKAFAVLREMHASGVRPDRHFYNVMIDTFGKYNCLGHAMDA 419

Query: 733 WEVAAQKNVYPDAV 746
           ++   ++ + PD V
Sbjct: 420 FDRMREEGIEPDVV 433


>gi|302772597|ref|XP_002969716.1| hypothetical protein SELMODRAFT_92207 [Selaginella moellendorffii]
 gi|300162227|gb|EFJ28840.1| hypothetical protein SELMODRAFT_92207 [Selaginella moellendorffii]
          Length = 457

 Score =  157 bits (396), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 90/305 (29%), Positives = 159/305 (52%), Gaps = 1/305 (0%)

Query: 334 LKQLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQP 393
           L Q Q    A   F  +  Q G   +  +Y+ ++  L R ++     +LL++M+  G QP
Sbjct: 62  LCQAQRFEEARSVFRGMAAQ-GCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQP 120

Query: 394 NVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMY 453
           NVVTY  L+    +   L EA+D+F +M   GC PD V Y  LID  +K G +  A  ++
Sbjct: 121 NVVTYGSLLSGLCKMGKLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLF 180

Query: 454 KKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKA 513
           ++M   G  P  FTY+ +++   + G       LF +M+ QGC+PN+ T+N ++    K 
Sbjct: 181 EEMLEKGCIPTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKM 240

Query: 514 RNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVY 573
            +   A +L+ +M++ G  PD V+Y+ +M  +   G   EA+ +  EM R    PD   Y
Sbjct: 241 GDMVEAHRLFLEMRSLGCPPDVVSYNTLMRGMCSKGKPHEAQRLLREMIRSGVGPDIVSY 300

Query: 574 GLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLN 633
            +L+D + K+G +  A + +  + ++GL P+  + ++++    R G++  A+ + + M+ 
Sbjct: 301 NILIDGYSKSGALDHAIKLFYEIPKSGLEPDAFSYSTIIDCLCRAGKVGAAFVVFKDMIA 360

Query: 634 LGLKP 638
            G  P
Sbjct: 361 NGSAP 365



 Score =  149 bits (375), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 85/304 (27%), Positives = 150/304 (49%)

Query: 344 LGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIH 403
           + FF W   Q  + H   +Y  ++ +L ++ +   +    + M+  GC PN  TY  L+ 
Sbjct: 1   MAFFQWAGSQVHYNHGTLSYNYLLEVLAKSGRCDHVYGTYNDMLGAGCVPNTYTYGYLLR 60

Query: 404 SYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSP 463
           S  +A    EA  VF+ M   GC P+  +Y  LI    +   +D A ++  +M   G  P
Sbjct: 61  SLCQAQRFEEARSVFRGMAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQP 120

Query: 464 DTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLY 523
           +  TY  +++ L K G L+ A  LF  MV +GC P+ V YN++I   +K  +   A +L+
Sbjct: 121 NVVTYGSLLSGLCKMGKLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLF 180

Query: 524 RDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKA 583
            +M   G  P   TY+ ++      G     +++F +M R+  VP+   +  L+D + K 
Sbjct: 181 EEMLEKGCIPTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKM 240

Query: 584 GNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTY 643
           G++ +A   +  M   G  P+V + N+L+      G+  +A  LL+ M+  G+ P + +Y
Sbjct: 241 GDMVEAHRLFLEMRSLGCPPDVVSYNTLMRGMCSKGKPHEAQRLLREMIRSGVGPDIVSY 300

Query: 644 TLLL 647
            +L+
Sbjct: 301 NILI 304



 Score =  147 bits (370), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 86/300 (28%), Positives = 152/300 (50%)

Query: 354 AGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNE 413
           AG   + +TY  ++  L +A++F     +   M   GC PNV +Y+ LI    R   ++E
Sbjct: 46  AGCVPNTYTYGYLLRSLCQAQRFEEARSVFRGMAAQGCSPNVFSYSILIAGLCRGQKVDE 105

Query: 414 ALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIIN 473
           A ++  +M   G +P+ VTY +L+    K G L  A+D++ +M   G  PD   Y+V+I+
Sbjct: 106 AAELLNEMIDGGHQPNVVTYGSLLSGLCKMGKLKEAVDLFSRMVYRGCPPDGVVYNVLID 165

Query: 474 CLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEP 533
              K G +  A++LF EM+ +GCIP + TYN +++  ++   +     L++DM   G  P
Sbjct: 166 GFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVP 225

Query: 534 DKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWY 593
           +  T++ +++     G + EA  +F EMR     PD   Y  L+      G   +A    
Sbjct: 226 NIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLGCPPDVVSYNTLMRGMCSKGKPHEAQRLL 285

Query: 594 EAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEA 653
             M+++G+ P++ + N L+  + + G L  A  L   +   GL+P   +Y+ ++ C   A
Sbjct: 286 REMIRSGVGPDIVSYNILIDGYSKSGALDHAIKLFYEIPKSGLEPDAFSYSTIIDCLCRA 345



 Score =  135 bits (340), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 76/293 (25%), Positives = 137/293 (46%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           G   D   Y  ++    +    G   +L ++M+  GC P V TYN L+  + R       
Sbjct: 152 GCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNSLLSGFSRKGEFGRV 211

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
             +FK M   GC P+  T+  L+D   K G +  A  ++ +M++ G  PD  +Y+ ++  
Sbjct: 212 QSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLGCPPDVVSYNTLMRG 271

Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPD 534
           +   G    A +L  EM+  G  P++V+YNI+I   +K+     A+KL+ ++  +G EPD
Sbjct: 272 MCSKGKPHEAQRLLREMIRSGVGPDIVSYNILIDGYSKSGALDHAIKLFYEIPKSGLEPD 331

Query: 535 KVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYE 594
             +YS +++ L   G +  A  VF +M      PD  V   LV    +   + ++ E ++
Sbjct: 332 AFSYSTIIDCLCRAGKVGAAFVVFKDMIANGSAPDAAVVIPLVIGLCRGERLTESCELFQ 391

Query: 595 AMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
           AM++    P +P  N L+    +  +  D   +   +   G  P ++   ++L
Sbjct: 392 AMVKFECVPLIPEYNLLMYKLCKAKRSDDVCEIFHELTERGFSPDVEISKVIL 444



 Score =  129 bits (323), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 89/351 (25%), Positives = 160/351 (45%), Gaps = 2/351 (0%)

Query: 396 VTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKK 455
           ++YN L+    ++   +     +  M   GC P+  TY  L+    +A   + A  +++ 
Sbjct: 18  LSYNYLLEVLAKSGRCDHVYGTYNDMLGAGCVPNTYTYGYLLRSLCQAQRFEEARSVFRG 77

Query: 456 MQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARN 515
           M A G SP+ F+YS++I  L +   +  A +L  EM++ G  PN+VTY  +++   K   
Sbjct: 78  MAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMGK 137

Query: 516 YQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGL 575
            + A+ L+  M   G  PD V Y+++++     G + EA  +F EM  K  +P    Y  
Sbjct: 138 LKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNS 197

Query: 576 LVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLG 635
           L+  + + G   +    ++ ML+ G  PN+ T N+LL  F ++G + +A+ L   M +LG
Sbjct: 198 LLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLG 257

Query: 636 LKPSLQTY-TLLLSCCTEARSPYDMGFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHV 694
             P + +Y TL+   C++ + P++       M  SG    +   ++   G       DH 
Sbjct: 258 CPPDVVSYNTLMRGMCSKGK-PHEAQRLLREMIRSGVGPDIVSYNILIDGYSKSGALDHA 316

Query: 695 GSFLEMMHSEDRESKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDA 745
                 +     E        ++D L ++G    A  V++        PDA
Sbjct: 317 IKLFYEIPKSGLEPDAFSYSTIIDCLCRAGKVGAAFVVFKDMIANGSAPDA 367



 Score =  122 bits (305), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 74/258 (28%), Positives = 126/258 (48%), Gaps = 4/258 (1%)

Query: 362 TYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQM 421
           TY +++    R  +FG +  L   M+R GC PN+ T+N L+  + +   + EA  +F +M
Sbjct: 194 TYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEM 253

Query: 422 QVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHL 481
           + +GC PD V+Y TL+      G    A  + ++M  +G+ PD  +Y+++I+   K+G L
Sbjct: 254 RSLGCPPDVVSYNTLMRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNILIDGYSKSGAL 313

Query: 482 QAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIV 541
             A +LF E+   G  P+  +Y+ +I    +A    +A  +++DM   G  PD     ++
Sbjct: 314 DHAIKLFYEIPKSGLEPDAFSYSTIIDCLCRAGKVGAAFVVFKDMIANGSAPDAAV--VI 371

Query: 542 MEVLGHC--GYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQA 599
             V+G C    L E+  +F  M +   VP  P Y LL+    KA       E +  + + 
Sbjct: 372 PLVIGLCRGERLTESCELFQAMVKFECVPLIPEYNLLMYKLCKAKRSDDVCEIFHELTER 431

Query: 600 GLRPNVPTCNSLLSAFLR 617
           G  P+V     +L    R
Sbjct: 432 GFSPDVEISKVILETLRR 449



 Score =  102 bits (255), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 97/403 (24%), Positives = 166/403 (41%), Gaps = 80/403 (19%)

Query: 465 TFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYR 524
           T +Y+ ++  L K+G     +  + +M+  GC+PN  TY  ++    +A+ ++ A  ++R
Sbjct: 17  TLSYNYLLEVLAKSGRCDHVYGTYNDMLGAGCVPNTYTYGYLLRSLCQAQRFEEARSVFR 76

Query: 525 -----------------------------------DMQNAGFEPDKVTYSIVMEVLGHCG 549
                                              +M + G +P+ VTY  ++  L   G
Sbjct: 77  GMAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMG 136

Query: 550 YLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCN 609
            L EA  +F+ M  +   PD  VY +L+D + K G++ +A+  +E ML+ G  P V T N
Sbjct: 137 KLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYN 196

Query: 610 SLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGFCHELMAVS 669
           SLLS F R G+      L + ML  G  P++ T+  LL            GFC     V 
Sbjct: 197 SLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLD-----------GFCKMGDMVE 245

Query: 670 GHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDR--ESKRGLVDAV----------- 716
            H   + + S+  P PD  +      + +  M S+ +  E++R L + +           
Sbjct: 246 AHRLFLEMRSLGCP-PDVVSYN----TLMRGMCSKGKPHEAQRLLREMIRSGVGPDIVSY 300

Query: 717 ---VDFLHKSGLKEEAGSVWEVAAQKNVYPDAVKEKGMSYWLINLHVMSDGTAVIALSRT 773
              +D   KSG  + A  ++    +  + PDA     +   L     +  G A +     
Sbjct: 301 NILIDGYSKSGALDHAIKLFYEIPKSGLEPDAFSYSTIIDCLCRAGKV--GAAFVVF--- 355

Query: 774 LAWFRKQMLISGVGPSR---IDIVTGWGRRSRVTGTSLVRQAV 813
                K M+ +G  P     I +V G  R  R+T +  + QA+
Sbjct: 356 -----KDMIANGSAPDAAVVIPLVIGLCRGERLTESCELFQAM 393



 Score =  102 bits (254), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 57/195 (29%), Positives = 102/195 (52%), Gaps = 2/195 (1%)

Query: 352 RQAGFKHDEHTYTTMV-GILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANY 410
           R  G   D  +Y T++ G+  + +   A  +LL +M+R G  P++V+YN LI  Y ++  
Sbjct: 254 RSLGCPPDVVSYNTLMRGMCSKGKPHEA-QRLLREMIRSGVGPDIVSYNILIDGYSKSGA 312

Query: 411 LNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSV 470
           L+ A+ +F ++   G EPD  +Y T+ID   +AG +  A  ++K M A G +PD      
Sbjct: 313 LDHAIKLFYEIPKSGLEPDAFSYSTIIDCLCRAGKVGAAFVVFKDMIANGSAPDAAVVIP 372

Query: 471 IINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAG 530
           ++  L +   L  + +LF  MV   C+P +  YN+++    KA+      +++ ++   G
Sbjct: 373 LVIGLCRGERLTESCELFQAMVKFECVPLIPEYNLLMYKLCKAKRSDDVCEIFHELTERG 432

Query: 531 FEPDKVTYSIVMEVL 545
           F PD     +++E L
Sbjct: 433 FSPDVEISKVILETL 447


>gi|148906470|gb|ABR16388.1| unknown [Picea sitchensis]
          Length = 700

 Score =  157 bits (396), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 123/501 (24%), Positives = 219/501 (43%), Gaps = 24/501 (4%)

Query: 296 NVVESVSRILRQWKWGPLAEEALGNTNYSMDAYQANQVLKQLQDHTVALGFFNWLRRQAG 355
           + V  + + + + +W  L +  L +    ++     +VL    D   AL FF W  +Q G
Sbjct: 152 DTVNKICKAIEEDQWECLQDNFLNSMAQDLNPDAVVKVLNLQTDAQNALRFFQWADKQEG 211

Query: 356 FKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEAL 415
           + H+   Y TM+ ILGRA+ F  +  LL +M   G +      +  + SYGR+    E+L
Sbjct: 212 YDHNTDAYFTMIDILGRAKMFTELQSLLQKMQTQGREITRSMLHSFVMSYGRSGRFKESL 271

Query: 416 DVFKQMQVVGCEPDRV--TYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIIN 473
           + F  M+ +G EP  +   Y +++    K   LD+A +++ +M   G+S +  TY+ +I 
Sbjct: 272 EAFNLMKEMGYEPGLIDTAYNSVLVSLVKNKKLDMAENLFAQMINNGVSCNNLTYTSMIQ 331

Query: 474 CLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEP 533
           C      ++ A +L  +M+     P++VTY I+I+   K +  + A  + + M+  G EP
Sbjct: 332 CFFLKEKMEDAMKLLDDMIQNNYAPDVVTYTIVISALCKRKMIEQAYGVLQKMRENGCEP 391

Query: 534 DKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWY 593
           +  TY+ +++ L      +EA  +   M +    P+   Y +L     K   + +A E +
Sbjct: 392 NIYTYNALIQGLCAVRRPEEALELVTLMEQGGVPPNIYTYTILTHGLCKLRRLDRAKEMF 451

Query: 594 EAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEA 653
              L  GL+PN  T N+LL+ + R  +L +A  +L+ M      P   TYT L+    + 
Sbjct: 452 NEALARGLKPNRVTYNTLLNGYCRGSRLIEAMDILKEMHQNDCTPDHVTYTTLIQGLVQG 511

Query: 654 RSPYDMGFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRESKRGLV 713
               D    H+ M   G+  +   L++ + G         VG+  +      R   RG  
Sbjct: 512 NQLPDALRMHDEMENKGYDVNFDTLNILARG------LARVGNHKDASIFYRRMKDRGFA 565

Query: 714 DAVVDF------LHKSGLKEEAGSVWEVAAQKNVYPDAVKEKGMSYWLINLHVMSDGTAV 767
            +  D+      L  +G  EEA ++      K   P+      M         + D  A+
Sbjct: 566 YSASDYYLAIHCLSTAGEMEEAQALLYEMINKGYSPNLTTYNTMIKGFCRQGRLDDADAM 625

Query: 768 IALSRTLAWFRKQMLISGVGP 788
           +            M+ +G+GP
Sbjct: 626 LNF----------MIENGIGP 636



 Score =  137 bits (344), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 82/295 (27%), Positives = 138/295 (46%)

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
           Q  +  D  TYT ++  L + +       +L +M  +GC+PN+ TYN LI          
Sbjct: 351 QNNYAPDVVTYTIVISALCKRKMIEQAYGVLQKMRENGCEPNIYTYNALIQGLCAVRRPE 410

Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
           EAL++   M+  G  P+  TY  L     K   LD A +M+ +  A GL P+  TY+ ++
Sbjct: 411 EALELVTLMEQGGVPPNIYTYTILTHGLCKLRRLDRAKEMFNEALARGLKPNRVTYNTLL 470

Query: 473 NCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFE 532
           N   +   L  A  +  EM    C P+ VTY  +I    +      AL+++ +M+N G++
Sbjct: 471 NGYCRGSRLIEAMDILKEMHQNDCTPDHVTYTTLIQGLVQGNQLPDALRMHDEMENKGYD 530

Query: 533 PDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEW 592
            +  T +I+   L   G   +A   +  M+ + +      Y L +     AG + +A   
Sbjct: 531 VNFDTLNILARGLARVGNHKDASIFYRRMKDRGFAYSASDYYLAIHCLSTAGEMEEAQAL 590

Query: 593 YEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
              M+  G  PN+ T N+++  F R G+L DA  +L  M+  G+ P   +Y +L+
Sbjct: 591 LYEMINKGYSPNLTTYNTMIKGFCRQGRLDDADAMLNFMIENGIGPDTGSYNILI 645



 Score =  129 bits (324), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 84/294 (28%), Positives = 143/294 (48%), Gaps = 4/294 (1%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           R+ G + + +TY  ++  L   R+     +L+  M + G  PN+ TY  L H   +   L
Sbjct: 385 RENGCEPNIYTYNALIQGLCAVRRPEEALELVTLMEQGGVPPNIYTYTILTHGLCKLRRL 444

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
           + A ++F +    G +P+RVTY TL++ + +   L  AMD+ K+M     +PD  TY+ +
Sbjct: 445 DRAKEMFNEALARGLKPNRVTYNTLLNGYCRGSRLIEAMDILKEMHQNDCTPDHVTYTTL 504

Query: 472 INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF 531
           I  L +   L  A ++  EM N+G   N  T NI+    A+  N++ A   YR M++ GF
Sbjct: 505 IQGLVQGNQLPDALRMHDEMENKGYDVNFDTLNILARGLARVGNHKDASIFYRRMKDRGF 564

Query: 532 EPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWE 591
                 Y + +  L   G ++EA+A+  EM  K + P+   Y  ++  + + G +  A  
Sbjct: 565 AYSASDYYLAIHCLSTAGEMEEAQALLYEMINKGYSPNLTTYNTMIKGFCRQGRLDDADA 624

Query: 592 WYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGL----KPSLQ 641
               M++ G+ P+  + N L+  F   G+  DA  L    L  G+    KP +Q
Sbjct: 625 MLNFMIENGIGPDTGSYNILIKEFHNQGRTQDADQLYATALERGVVLNPKPVIQ 678



 Score =  114 bits (284), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 70/252 (27%), Positives = 123/252 (48%)

Query: 350 LRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRAN 409
           L  Q G   + +TYT +   L + R+     ++ ++ +  G +PN VTYN L++ Y R +
Sbjct: 418 LMEQGGVPPNIYTYTILTHGLCKLRRLDRAKEMFNEALARGLKPNRVTYNTLLNGYCRGS 477

Query: 410 YLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYS 469
            L EA+D+ K+M    C PD VTY TLI    +   L  A+ M+ +M+  G   +  T +
Sbjct: 478 RLIEAMDILKEMHQNDCTPDHVTYTTLIQGLVQGNQLPDALRMHDEMENKGYDVNFDTLN 537

Query: 470 VIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNA 529
           ++   L + G+ + A   +  M ++G   +   Y + I   + A   + A  L  +M N 
Sbjct: 538 ILARGLARVGNHKDASIFYRRMKDRGFAYSASDYYLAIHCLSTAGEMEEAQALLYEMINK 597

Query: 530 GFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKA 589
           G+ P+  TY+ +++     G LD+A+A+   M      PD   Y +L+  +   G  + A
Sbjct: 598 GYSPNLTTYNTMIKGFCRQGRLDDADAMLNFMIENGIGPDTGSYNILIKEFHNQGRTQDA 657

Query: 590 WEWYEAMLQAGL 601
            + Y   L+ G+
Sbjct: 658 DQLYATALERGV 669



 Score =  113 bits (282), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 88/381 (23%), Positives = 155/381 (40%), Gaps = 4/381 (1%)

Query: 363 YTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQ 422
           Y +++  L + ++      L  QM+ +G   N +TY  +I  +     + +A+ +   M 
Sbjct: 291 YNSVLVSLVKNKKLDMAENLFAQMINNGVSCNNLTYTSMIQCFFLKEKMEDAMKLLDDMI 350

Query: 423 VVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQ 482
                PD VTY  +I    K   ++ A  + +KM+  G  P+ +TY+ +I  L      +
Sbjct: 351 QNNYAPDVVTYTIVISALCKRKMIEQAYGVLQKMRENGCEPNIYTYNALIQGLCAVRRPE 410

Query: 483 AAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVM 542
            A +L   M   G  PN+ TY I+     K R    A +++ +    G +P++VTY+ ++
Sbjct: 411 EALELVTLMEQGGVPPNIYTYTILTHGLCKLRRLDRAKEMFNEALARGLKPNRVTYNTLL 470

Query: 543 EVLGHC--GYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAG 600
              G+C    L EA  +  EM + +  PD   Y  L+    +   +  A   ++ M   G
Sbjct: 471 N--GYCRGSRLIEAMDILKEMHQNDCTPDHVTYTTLIQGLVQGNQLPDALRMHDEMENKG 528

Query: 601 LRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMG 660
              N  T N L     RVG   DA    + M + G   S   Y L + C + A    +  
Sbjct: 529 YDVNFDTLNILARGLARVGNHKDASIFYRRMKDRGFAYSASDYYLAIHCLSTAGEMEEAQ 588

Query: 661 FCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRESKRGLVDAVVDFL 720
                M   G+  ++   +    G   Q   D   + L  M         G  + ++   
Sbjct: 589 ALLYEMINKGYSPNLTTYNTMIKGFCRQGRLDDADAMLNFMIENGIGPDTGSYNILIKEF 648

Query: 721 HKSGLKEEAGSVWEVAAQKNV 741
           H  G  ++A  ++  A ++ V
Sbjct: 649 HNQGRTQDADQLYATALERGV 669


>gi|62320494|dbj|BAD95034.1| hypothetical protein [Arabidopsis thaliana]
          Length = 602

 Score =  157 bits (396), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 91/323 (28%), Positives = 152/323 (47%), Gaps = 1/323 (0%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           R   F  D  TY  M+G L    +     K+L+Q++ D CQP V+TY  LI +      +
Sbjct: 185 RSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGV 244

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
           +EAL +  +M   G +PD  TY T+I    K G +D A +M + ++  G  PD  +Y+++
Sbjct: 245 DEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGSEPDVISYNIL 304

Query: 472 INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF 531
           +  L   G  +   +L  +M ++ C PN+VTY+I+I    +    + A+ L + M+  G 
Sbjct: 305 LRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGL 364

Query: 532 EPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWE 591
            PD  +Y  ++      G LD A      M     +PD   Y  ++    K G   +A E
Sbjct: 365 TPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALE 424

Query: 592 WYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSC-C 650
            +  + + G  PN  + N++ SA    G    A H++  M++ G+ P   TY  ++SC C
Sbjct: 425 IFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLC 484

Query: 651 TEARSPYDMGFCHELMAVSGHPA 673
            E           ++ +   HP+
Sbjct: 485 REGMVDEAFELLVDMRSCEFHPS 507



 Score =  140 bits (352), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 85/297 (28%), Positives = 149/297 (50%), Gaps = 8/297 (2%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRD----GCQPNVVTYNRLIHSYGRANY 410
           G K D  TY T+  I G  ++ G +++   +MVR+    G +P+V++YN L+ +      
Sbjct: 258 GLKPDMFTYNTI--IRGMCKE-GMVDRAF-EMVRNLELKGSEPDVISYNILLRALLNQGK 313

Query: 411 LNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSV 470
             E   +  +M    C+P+ VTY  LI    + G ++ AM++ K M+  GL+PD ++Y  
Sbjct: 314 WEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDP 373

Query: 471 IINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAG 530
           +I    + G L  A +    M++ GC+P++V YN ++A   K      AL+++  +   G
Sbjct: 374 LIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVG 433

Query: 531 FEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAW 590
             P+  +Y+ +   L   G    A  +  EM      PDE  Y  ++    + G V +A+
Sbjct: 434 CSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAF 493

Query: 591 EWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
           E    M      P+V T N +L  F +  ++ DA ++L+ M+  G +P+  TYT+L+
Sbjct: 494 ELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLI 550



 Score =  135 bits (339), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 78/290 (26%), Positives = 140/290 (48%)

Query: 359 DEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVF 418
           D   Y  ++    +  +     ++LD+M      P+ VTYN +I S      L+ AL V 
Sbjct: 157 DVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVL 216

Query: 419 KQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKA 478
            Q+    C+P  +TY  LI+     G +D A+ +  +M + GL PD FTY+ II  + K 
Sbjct: 217 NQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKE 276

Query: 479 GHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTY 538
           G +  A ++   +  +G  P++++YNI++        ++   KL   M +   +P+ VTY
Sbjct: 277 GMVDRAFEMVRNLELKGSEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTY 336

Query: 539 SIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQ 598
           SI++  L   G ++EA  +   M+ K   PD   Y  L+  + + G +  A E+ E M+ 
Sbjct: 337 SILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMIS 396

Query: 599 AGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
            G  P++   N++L+   + G+   A  +   +  +G  P+  +Y  + S
Sbjct: 397 DGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFS 446



 Score =  132 bits (332), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 84/311 (27%), Positives = 150/311 (48%), Gaps = 2/311 (0%)

Query: 326 DAYQANQVLKQLQDHTVALGFFNWLR--RQAGFKHDEHTYTTMVGILGRARQFGAINKLL 383
           D +  N +++ +    +    F  +R     G + D  +Y  ++  L    ++    KL+
Sbjct: 262 DMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGSEPDVISYNILLRALLNQGKWEEGEKLM 321

Query: 384 DQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKA 443
            +M  + C PNVVTY+ LI +  R   + EA+++ K M+  G  PD  +Y  LI    + 
Sbjct: 322 TKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCRE 381

Query: 444 GFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTY 503
           G LDVA++  + M + G  PD   Y+ ++  L K G    A ++F ++   GC PN  +Y
Sbjct: 382 GRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSY 441

Query: 504 NIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRR 563
           N M +    + +   AL +  +M + G +PD++TY+ ++  L   G +DEA  +  +MR 
Sbjct: 442 NTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRS 501

Query: 564 KNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSD 623
             + P    Y +++  + KA  +  A    E+M+  G RPN  T   L+      G  ++
Sbjct: 502 CEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAE 561

Query: 624 AYHLLQGMLNL 634
           A  L   ++ +
Sbjct: 562 AMELANDLVRI 572


>gi|356552005|ref|XP_003544362.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At1g09680-like [Glycine max]
          Length = 509

 Score =  157 bits (396), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 87/256 (33%), Positives = 142/256 (55%)

Query: 393 PNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDM 452
           P+V T++ LI+   +   L+E   +F +M   G  P+ VT+  LID   K G +D+A+  
Sbjct: 210 PDVFTFSALINGLCKEGRLDEGSLLFDEMCGKGLVPNGVTFTVLIDGQCKGGKVDLALKN 269

Query: 453 YKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAK 512
           ++ M A G+ PD  TY+ +IN L K G L+ A +L  EM   G  P+ +T+  +I    K
Sbjct: 270 FQMMLAQGVRPDLVTYNALINGLCKVGDLKEARRLVNEMSASGLRPDRITFTTLIDGCCK 329

Query: 513 ARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPV 572
             + +SAL++ R M   G E D V +++++  L   G + +AE +  +M    + PD+P 
Sbjct: 330 YGDMESALEIKRRMVEEGIELDDVAFTVLISGLCRDGRVHDAERMLRDMLSAGFKPDDPT 389

Query: 573 YGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGML 632
           Y ++VD + K GNV   ++  + M   G  P V T N+L++   + GQ+ +A  LL  ML
Sbjct: 390 YTMVVDCFCKKGNVXMGFKLLKEMQSDGHVPGVVTYNALMNGLCKQGQVKNAKMLLDAML 449

Query: 633 NLGLKPSLQTYTLLLS 648
           N+G+ P+  TY +LL 
Sbjct: 450 NVGVAPNDITYNILLE 465



 Score =  144 bits (362), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 88/277 (31%), Positives = 138/277 (49%), Gaps = 1/277 (0%)

Query: 385 QMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAG 444
           +++  G  PN   +N L+H + +   +  A  VF ++   G  P  V++ TLI    KAG
Sbjct: 132 EVLDSGYPPNFFFFNVLMHGFCKVGGVGSARLVFDEIPKRGLRPTVVSFNTLISGCCKAG 191

Query: 445 FLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYN 504
            ++    +   M++  + PD FT+S +IN L K G L     LF EM  +G +PN VT+ 
Sbjct: 192 AVEEGFRLKGVMESERVCPDVFTFSALINGLCKEGRLDEGSLLFDEMCGKGLVPNGVTFT 251

Query: 505 IMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRK 564
           ++I  Q K      ALK ++ M   G  PD VTY+ ++  L   G L EA  +  EM   
Sbjct: 252 VLIDGQCKGGKVDLALKNFQMMLAQGVRPDLVTYNALINGLCKVGDLKEARRLVNEMSAS 311

Query: 565 NWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDA 624
              PD   +  L+D   K G++  A E    M++ G+  +      L+S   R G++ DA
Sbjct: 312 GLRPDRITFTTLIDGCCKYGDMESALEIKRRMVEEGIELDDVAFTVLISGLCRDGRVHDA 371

Query: 625 YHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGF 661
             +L+ ML+ G KP   TYT+++ C  + +    MGF
Sbjct: 372 ERMLRDMLSAGFKPDDPTYTMVVDCFCK-KGNVXMGF 407



 Score =  125 bits (313), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 80/266 (30%), Positives = 130/266 (48%)

Query: 359 DEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVF 418
           D  T++ ++  L +  +    + L D+M   G  PN VT+  LI    +   ++ AL  F
Sbjct: 211 DVFTFSALINGLCKEGRLDEGSLLFDEMCGKGLVPNGVTFTVLIDGQCKGGKVDLALKNF 270

Query: 419 KQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKA 478
           + M   G  PD VTY  LI+   K G L  A  +  +M A+GL PD  T++ +I+   K 
Sbjct: 271 QMMLAQGVRPDLVTYNALINGLCKVGDLKEARRLVNEMSASGLRPDRITFTTLIDGCCKY 330

Query: 479 GHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTY 538
           G +++A ++   MV +G   + V + ++I+   +      A ++ RDM +AGF+PD  TY
Sbjct: 331 GDMESALEIKRRMVEEGIELDDVAFTVLISGLCRDGRVHDAERMLRDMLSAGFKPDDPTY 390

Query: 539 SIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQ 598
           ++V++     G +     +  EM+    VP    Y  L++   K G V+ A    +AML 
Sbjct: 391 TMVVDCFCKKGNVXMGFKLLKEMQSDGHVPGVVTYNALMNGLCKQGQVKNAKMLLDAMLN 450

Query: 599 AGLRPNVPTCNSLLSAFLRVGQLSDA 624
            G+ PN  T N LL    + G   D 
Sbjct: 451 VGVAPNDITYNILLEGHSKHGSSVDV 476



 Score =  106 bits (264), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 61/201 (30%), Positives = 108/201 (53%)

Query: 452 MYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQA 511
            Y ++  +G  P+ F ++V+++   K G + +A  +F E+  +G  P +V++N +I+   
Sbjct: 129 FYLEVLDSGYPPNFFFFNVLMHGFCKVGGVGSARLVFDEIPKRGLRPTVVSFNTLISGCC 188

Query: 512 KARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEP 571
           KA   +   +L   M++    PD  T+S ++  L   G LDE   +F EM  K  VP+  
Sbjct: 189 KAGAVEEGFRLKGVMESERVCPDVFTFSALINGLCKEGRLDEGSLLFDEMCGKGLVPNGV 248

Query: 572 VYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGM 631
            + +L+D   K G V  A + ++ ML  G+RP++ T N+L++   +VG L +A  L+  M
Sbjct: 249 TFTVLIDGQCKGGKVDLALKNFQMMLAQGVRPDLVTYNALINGLCKVGDLKEARRLVNEM 308

Query: 632 LNLGLKPSLQTYTLLLSCCTE 652
              GL+P   T+T L+  C +
Sbjct: 309 SASGLRPDRITFTTLIDGCCK 329



 Score = 99.4 bits (246), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 60/206 (29%), Positives = 105/206 (50%), Gaps = 3/206 (1%)

Query: 342 VALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRL 401
           +AL  F  +  Q G + D  TY  ++  L +        +L+++M   G +P+ +T+  L
Sbjct: 265 LALKNFQMMLAQ-GVRPDLVTYNALINGLCKVGDLKEARRLVNEMSASGLRPDRITFTTL 323

Query: 402 IHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGL 461
           I    +   +  AL++ ++M   G E D V +  LI    + G +  A  M + M +AG 
Sbjct: 324 IDGCCKYGDMESALEIKRRMVEEGIELDDVAFTVLISGLCRDGRVHDAERMLRDMLSAGF 383

Query: 462 SPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALK 521
            PD  TY+++++C  K G++    +L  EM + G +P +VTYN ++    K    ++A  
Sbjct: 384 KPDDPTYTMVVDCFCKKGNVXMGFKLLKEMQSDGHVPGVVTYNALMNGLCKQGQVKNAKM 443

Query: 522 LYRDMQNAGFEPDKVTYSIVMEVLGH 547
           L   M N G  P+ +TY+I++E  GH
Sbjct: 444 LLDAMLNVGVAPNDITYNILLE--GH 467



 Score = 50.8 bits (120), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 34/163 (20%), Positives = 75/163 (46%), Gaps = 7/163 (4%)

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
           + G + D+  +T ++  L R  +     ++L  M+  G +P+  TY  ++  + +   + 
Sbjct: 345 EEGIELDDVAFTVLISGLCRDGRVHDAERMLRDMLSAGFKPDDPTYTMVVDCFCKKGNVX 404

Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
               + K+MQ  G  P  VTY  L++   K G +  A  +   M   G++P+  TY++++
Sbjct: 405 MGFKLLKEMQSDGHVPGVVTYNALMNGLCKQGQVKNAKMLLDAMLNVGVAPNDITYNILL 464

Query: 473 NCLGKAGHLQAAHQLFCEMVN--QGCIPNLVTYNIMIALQAKA 513
                 GH +    +  ++ N  +G + +  +Y  ++   +K 
Sbjct: 465 E-----GHSKHGSSVDVDIFNSEKGLVKDYASYTALVNESSKT 502



 Score = 42.0 bits (97), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 19/68 (27%), Positives = 37/68 (54%)

Query: 586 VRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTL 645
           + ++W +Y  +L +G  PN    N L+  F +VG +  A  +   +   GL+P++ ++  
Sbjct: 123 LERSWAFYLEVLDSGYPPNFFFFNVLMHGFCKVGGVGSARLVFDEIPKRGLRPTVVSFNT 182

Query: 646 LLSCCTEA 653
           L+S C +A
Sbjct: 183 LISGCCKA 190


>gi|125600636|gb|EAZ40212.1| hypothetical protein OsJ_24656 [Oryza sativa Japonica Group]
          Length = 661

 Score =  157 bits (396), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 93/318 (29%), Positives = 152/318 (47%)

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
           Q G   DE TY+ +V    RA ++ +   LL +M  DG +P+   ++R++  +       
Sbjct: 320 QCGVAPDEATYSLLVDAYTRAGRWESARILLKEMEADGVKPSSYVFSRILAGFRDRGEWQ 379

Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
           +A  V ++M   G  PDR  Y  +ID   K   L  AMD + +M+  G+ PD  T++ +I
Sbjct: 380 KAFAVLREMHASGVRPDRHFYNVMIDTFGKYNCLGHAMDAFDRMREEGIEPDVVTWNTLI 439

Query: 473 NCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFE 532
           +   K G    A +LF EM    C     TYNIMI L  + + ++    +  +M+  G  
Sbjct: 440 DAHCKGGRHDRAIELFDEMRESNCPLGTTTYNIMINLLGEEQRWEGVEAMLAEMKEQGLV 499

Query: 533 PDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEW 592
           P+ +TY+ +++V G  G   EA      M+     P   +Y  LV+ + + G    A   
Sbjct: 500 PNIITYTTLVDVYGRSGRFKEAVDCIEAMKADGLKPSPTMYHALVNAYAQRGLADHALNV 559

Query: 593 YEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTE 652
            +AM   GL  +    NSL++AF    ++++A+ +LQ M   GL+P + TYT L+     
Sbjct: 560 VKAMRADGLEASTVVLNSLINAFGEDRRIAEAFSVLQFMKENGLRPDVITYTTLMKALIR 619

Query: 653 ARSPYDMGFCHELMAVSG 670
                 +   +E M  SG
Sbjct: 620 VEQFEKVPVIYEEMITSG 637



 Score =  137 bits (344), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 111/472 (23%), Positives = 194/472 (41%), Gaps = 71/472 (15%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDG-CQPNVVTYNRLIHSYGRANYLNE 413
           G     +  T ++  LG AR+      L  +    G  +P    YN L+  Y +   L  
Sbjct: 251 GLTPRSNAVTALISSLGSARRVAEAEALFLEFFLAGEIKPRTRAYNALLKGYVKIGSLKN 310

Query: 414 ALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIIN 473
           A  V  +M   G  PD  TY  L+D + +AG  + A  + K+M+A G+ P ++ +S I+ 
Sbjct: 311 AEQVLDEMSQCGVAPDEATYSLLVDAYTRAGRWESARILLKEMEADGVKPSSYVFSRILA 370

Query: 474 CLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEP 533
                G  Q A  +  EM   G  P+   YN+MI    K      A+  +  M+  G EP
Sbjct: 371 GFRDRGEWQKAFAVLREMHASGVRPDRHFYNVMIDTFGKYNCLGHAMDAFDRMREEGIEP 430

Query: 534 DKVTYSIVMEVLGHC--GYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWE 591
           D VT++ +++   HC  G  D A  +F EMR  N       Y ++++L G+     + WE
Sbjct: 431 DVVTWNTLID--AHCKGGRHDRAIELFDEMRESNCPLGTTTYNIMINLLGE----EQRWE 484

Query: 592 WYEAML----QAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
             EAML    + GL PN+ T  +L+  + R G+  +A   ++ M   GLKPS   Y  L+
Sbjct: 485 GVEAMLAEMKEQGLVPNIITYTTLVDVYGRSGRFKEAVDCIEAMKADGLKPSPTMYHALV 544

Query: 648 SCCTEARSPYDMGFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRE 707
           +   +                                   + + DH  + ++ M ++  E
Sbjct: 545 NAYAQ-----------------------------------RGLADHALNVVKAMRADGLE 569

Query: 708 SKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAVKEKGMSYWLINLHVMSDGTAV 767
           +   +++++++   +     EA SV +   +  + PD +    +   LI +        +
Sbjct: 570 ASTVVLNSLINAFGEDRRIAEAFSVLQFMKENGLRPDVITYTTLMKALIRVEQFEKVPVI 629

Query: 768 IALSRTLAWFRKQMLISGVGPSRIDIVTGWGRRSRVTGTSLVRQAVQELLHM 819
                      ++M+ SG  P R                +++R A++ + HM
Sbjct: 630 Y----------EEMITSGCAPDR-------------KARAMLRSALRYMKHM 658



 Score =  104 bits (260), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 83/370 (22%), Positives = 160/370 (43%), Gaps = 18/370 (4%)

Query: 237 VQPRSKAHSNRLNSNFKSNLQPSDAKVVECVSERFSKPSREMKIPAGLAPFSRHFASTGN 296
           ++PR++A+    N+  K  ++    K  E V +  S+         G+AP     A+   
Sbjct: 288 IKPRTRAY----NALLKGYVKIGSLKNAEQVLDEMSQ--------CGVAPDE---ATYSL 332

Query: 297 VVESVSRILRQWKWGPLAEEALGNTNYSMDAYQANQVLKQLQDHTVALGFFNWLRRQ--A 354
           +V++ +R  R W+   +  + +        +Y  +++L   +D       F  LR    +
Sbjct: 333 LVDAYTRAGR-WESARILLKEMEADGVKPSSYVFSRILAGFRDRGEWQKAFAVLREMHAS 391

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           G + D H Y  M+   G+    G      D+M  +G +P+VVT+N LI ++ +    + A
Sbjct: 392 GVRPDRHFYNVMIDTFGKYNCLGHAMDAFDRMREEGIEPDVVTWNTLIDAHCKGGRHDRA 451

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
           +++F +M+   C     TY  +I++  +    +    M  +M+  GL P+  TY+ +++ 
Sbjct: 452 IELFDEMRESNCPLGTTTYNIMINLLGEEQRWEGVEAMLAEMKEQGLVPNIITYTTLVDV 511

Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPD 534
            G++G  + A      M   G  P+   Y+ ++   A+      AL + + M+  G E  
Sbjct: 512 YGRSGRFKEAVDCIEAMKADGLKPSPTMYHALVNAYAQRGLADHALNVVKAMRADGLEAS 571

Query: 535 KVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYE 594
            V  + ++   G    + EA +V   M+     PD   Y  L+    +     K    YE
Sbjct: 572 TVVLNSLINAFGEDRRIAEAFSVLQFMKENGLRPDVITYTTLMKALIRVEQFEKVPVIYE 631

Query: 595 AMLQAGLRPN 604
            M+ +G  P+
Sbjct: 632 EMITSGCAPD 641



 Score = 53.9 bits (128), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 55/254 (21%), Positives = 100/254 (39%), Gaps = 4/254 (1%)

Query: 497 IPNLVTYNIMIALQAKARNYQSA---LKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDE 553
           +P+L +Y+ ++AL    R+   A    +L  D++ +  EPD   +S ++         D 
Sbjct: 180 LPDLASYSHLLALLLNTRDPPEAALLDRLLGDLRESRLEPDAPLFSDLISAFARARLPDA 239

Query: 554 AEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAG-LRPNVPTCNSLL 612
           A  + A  +     P       L+   G A  V +A   +     AG ++P     N+LL
Sbjct: 240 ALELLASAQAIGLTPRSNAVTALISSLGSARRVAEAEALFLEFFLAGEIKPRTRAYNALL 299

Query: 613 SAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGFCHELMAVSGHP 672
             ++++G L +A  +L  M   G+ P   TY+LL+   T A          + M   G  
Sbjct: 300 KGYVKIGSLKNAEQVLDEMSQCGVAPDEATYSLLVDAYTRAGRWESARILLKEMEADGVK 359

Query: 673 AHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRESKRGLVDAVVDFLHKSGLKEEAGSV 732
              ++ S    G   +       + L  MH+      R   + ++D   K      A   
Sbjct: 360 PSSYVFSRILAGFRDRGEWQKAFAVLREMHASGVRPDRHFYNVMIDTFGKYNCLGHAMDA 419

Query: 733 WEVAAQKNVYPDAV 746
           ++   ++ + PD V
Sbjct: 420 FDRMREEGIEPDVV 433



 Score = 53.9 bits (128), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 37/168 (22%), Positives = 71/168 (42%), Gaps = 35/168 (20%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           ++ G   +  TYTT+V + GR+ +F      ++ M  DG +P+   Y+ L+++Y +    
Sbjct: 494 KEQGLVPNIITYTTLVDVYGRSGRFKEAVDCIEAMKADGLKPSPTMYHALVNAYAQRGLA 553

Query: 412 NEALDVFKQMQVVGCE-----------------------------------PDRVTYCTL 436
           + AL+V K M+  G E                                   PD +TY TL
Sbjct: 554 DHALNVVKAMRADGLEASTVVLNSLINAFGEDRRIAEAFSVLQFMKENGLRPDVITYTTL 613

Query: 437 IDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAA 484
           +    +    +    +Y++M  +G +PD    +++ + L    H++ A
Sbjct: 614 MKALIRVEQFEKVPVIYEEMITSGCAPDRKARAMLRSALRYMKHMRVA 661


>gi|14532710|gb|AAK64156.1| unknown protein [Arabidopsis thaliana]
          Length = 974

 Score =  157 bits (396), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 99/288 (34%), Positives = 148/288 (51%), Gaps = 2/288 (0%)

Query: 361 HTYTTMV-GILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFK 419
           +TY T+V G+       GA N ++ +M+  GC+PNVV Y  LI ++ + +   +A+ V K
Sbjct: 418 YTYGTVVKGMCSSGDLDGAYN-IVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLK 476

Query: 420 QMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAG 479
           +M+  G  PD   Y +LI   +KA  +D A     +M   GL P+ FTY   I+   +A 
Sbjct: 477 EMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEAS 536

Query: 480 HLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYS 539
              +A +   EM   G +PN V    +I    K      A   YR M + G   D  TY+
Sbjct: 537 EFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYT 596

Query: 540 IVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQA 599
           ++M  L     +D+AE +F EMR K   PD   YG+L++ + K GN++KA   ++ M++ 
Sbjct: 597 VLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEE 656

Query: 600 GLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
           GL PNV   N LL  F R G++  A  LL  M   GL P+  TY  ++
Sbjct: 657 GLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTII 704



 Score =  139 bits (350), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 91/340 (26%), Positives = 156/340 (45%), Gaps = 43/340 (12%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           R  G   D  +Y  ++    +       + + D+MV +G  PNV+ YN L+  + R+  +
Sbjct: 619 RGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEI 678

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
            +A ++  +M V G  P+ VTYCT+ID + K+G L  A  ++ +M+  GL PD+F Y+ +
Sbjct: 679 EKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTL 738

Query: 472 INCLGKAGHLQAAHQLF------------------------------CEMVNQ---GCI- 497
           ++   +   ++ A  +F                               E++N+   G   
Sbjct: 739 VDGCCRLNDVERAITIFGTNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFD 798

Query: 498 ----PNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDE 553
               PN VTYNIMI    K  N ++A +L+  MQNA   P  +TY+ ++      G   E
Sbjct: 799 RFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAE 858

Query: 554 AEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQA-----GLRPNVPTC 608
              VF E       PD  +Y ++++ + K G   KA    + M        G + ++ TC
Sbjct: 859 MFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTC 918

Query: 609 NSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
            +LLS F +VG++  A  +++ M+ L   P   T   L++
Sbjct: 919 RALLSGFAKVGEMEVAEKVMENMVRLQYIPDSATVIELIN 958



 Score =  135 bits (341), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 94/374 (25%), Positives = 175/374 (46%), Gaps = 7/374 (1%)

Query: 280 IPAGLAPFSRHFASTGNVVESVSRILRQWKWGPLAEEALGNTNYSMDAYQANQVLKQLQD 339
           I +GL P ++ +AS   ++E   R  +  + G      +   N  +  Y    V+K +  
Sbjct: 374 IASGLIPQAQAYAS---LIEGYCR-EKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCS 429

Query: 340 HTVALGFFNWLRRQ--AGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVT 397
                G +N ++    +G + +   YTT++    +  +FG   ++L +M   G  P++  
Sbjct: 430 SGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFC 489

Query: 398 YNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQ 457
           YN LI    +A  ++EA     +M   G +P+  TY   I  + +A     A    K+M+
Sbjct: 490 YNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMR 549

Query: 458 AAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQ 517
             G+ P+    + +IN   K G +  A   +  MV+QG + +  TY +++    K     
Sbjct: 550 ECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVD 609

Query: 518 SALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLV 577
            A +++R+M+  G  PD  +Y +++      G + +A ++F EM  +   P+  +Y +L+
Sbjct: 610 DAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLL 669

Query: 578 DLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLK 637
             + ++G + KA E  + M   GL PN  T  +++  + + G L++A+ L   M   GL 
Sbjct: 670 GGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLV 729

Query: 638 PSLQTYTLLLS-CC 650
           P    YT L+  CC
Sbjct: 730 PDSFVYTTLVDGCC 743



 Score =  135 bits (340), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 95/336 (28%), Positives = 154/336 (45%), Gaps = 42/336 (12%)

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
           + G K +  TY   +     A +F + +K + +M   G  PN V    LI+ Y +   + 
Sbjct: 515 ENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVI 574

Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
           EA   ++ M   G   D  TY  L++   K   +D A +++++M+  G++PD F+Y V+I
Sbjct: 575 EACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLI 634

Query: 473 NCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFE 532
           N   K G++Q A  +F EMV +G  PN++ YN+++    ++   + A +L  +M   G  
Sbjct: 635 NGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLH 694

Query: 533 PDKVTYSIVMEVLGHC--GYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKA- 589
           P+ VTY  +++  G+C  G L EA  +F EM+ K  VPD  VY  LVD   +  +V +A 
Sbjct: 695 PNAVTYCTIID--GYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAI 752

Query: 590 ----------------------W-----------EWYEAMLQAGL----RPNVPTCNSLL 612
                                 W           E    ++        +PN  T N ++
Sbjct: 753 TIFGTNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMI 812

Query: 613 SAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
               + G L  A  L   M N  L P++ TYT LL+
Sbjct: 813 DYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLN 848



 Score =  116 bits (290), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 89/413 (21%), Positives = 177/413 (42%), Gaps = 4/413 (0%)

Query: 334 LKQLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQP 393
           +K+L+D    L   + L    G   D HTY+ ++  L + R   A   L+ +MV  G   
Sbjct: 290 IKRLEDAKSLLVEMDSL----GVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMVSHGINI 345

Query: 394 NVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMY 453
               Y+  I    +   + +A  +F  M   G  P    Y +LI+ + +   +    ++ 
Sbjct: 346 KPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELL 405

Query: 454 KKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKA 513
            +M+   +    +TY  ++  +  +G L  A+ +  EM+  GC PN+V Y  +I    + 
Sbjct: 406 VEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQN 465

Query: 514 RNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVY 573
             +  A+++ ++M+  G  PD   Y+ ++  L     +DEA +   EM      P+   Y
Sbjct: 466 SRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTY 525

Query: 574 GLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLN 633
           G  +  + +A     A ++ + M + G+ PN   C  L++ + + G++ +A    + M++
Sbjct: 526 GAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVD 585

Query: 634 LGLKPSLQTYTLLLSCCTEARSPYDMGFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDH 693
            G+    +TYT+L++   +     D       M   G    +F   +   G         
Sbjct: 586 QGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQK 645

Query: 694 VGSFLEMMHSEDRESKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAV 746
             S  + M  E       + + ++    +SG  E+A  + +  + K ++P+AV
Sbjct: 646 ASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAV 698



 Score = 94.7 bits (234), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 71/273 (26%), Positives = 118/273 (43%)

Query: 381 KLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIH 440
           KL + M+  G  P   TY+ LI    +   L +A  +  +M  +G   D  TY  LID  
Sbjct: 263 KLKESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGL 322

Query: 441 AKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNL 500
            K    D A  +  +M + G++   + Y   I  + K G ++ A  LF  M+  G IP  
Sbjct: 323 LKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQA 382

Query: 501 VTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAE 560
             Y  +I    + +N +   +L  +M+         TY  V++ +   G LD A  +  E
Sbjct: 383 QAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKE 442

Query: 561 MRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQ 620
           M      P+  +Y  L+  + +      A    + M + G+ P++   NSL+    +  +
Sbjct: 443 MIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKR 502

Query: 621 LSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEA 653
           + +A   L  M+  GLKP+  TY   +S   EA
Sbjct: 503 MDEARSFLVEMVENGLKPNAFTYGAFISGYIEA 535



 Score = 88.2 bits (217), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 70/268 (26%), Positives = 120/268 (44%), Gaps = 21/268 (7%)

Query: 401 LIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFL-------------- 446
           L+ +  R N L+   DV+K M       D  TY  LI  H +AG +              
Sbjct: 192 LLDALLRWNRLDLFWDVYKGMVERNVVFDVKTYHMLIIAHCRAGNVQLGKDVLFKTEKEF 251

Query: 447 -------DVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPN 499
                  D A+ + + M   GL P  +TY V+I+ L K   L+ A  L  EM + G   +
Sbjct: 252 RTATLNVDGALKLKESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLD 311

Query: 500 LVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFA 559
             TY+++I    K RN  +A  L  +M + G       Y   + V+   G +++A+A+F 
Sbjct: 312 NHTYSLLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFD 371

Query: 560 EMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVG 619
            M     +P    Y  L++ + +  NVR+ +E    M +  +  +  T  +++      G
Sbjct: 372 GMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSG 431

Query: 620 QLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
            L  AY++++ M+  G +P++  YT L+
Sbjct: 432 DLDGAYNIVKEMIASGCRPNVVIYTTLI 459


>gi|302794530|ref|XP_002979029.1| hypothetical protein SELMODRAFT_109908 [Selaginella moellendorffii]
 gi|300153347|gb|EFJ19986.1| hypothetical protein SELMODRAFT_109908 [Selaginella moellendorffii]
          Length = 500

 Score =  157 bits (396), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 92/288 (31%), Positives = 156/288 (54%), Gaps = 2/288 (0%)

Query: 362 TYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQM 421
           TY++++  L +  +     K+L++M+  GC P+V  +N ++  + R+N + +A +V++ M
Sbjct: 12  TYSSIIKSLVKEAKPEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNNMEKAREVYQHM 71

Query: 422 QVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHL 481
              G +PD V+Y  LI   AK G LD ++ +  +M   G +P    YS ++  L KA  +
Sbjct: 72  VESGYKPDNVSYHILIHGLAKIGKLDESLKILSEMVMRGQTPSMQAYSSLVRALAKARRV 131

Query: 482 QAAHQLFCEMVNQGCIPN-LVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSI 540
             A  LF EM+  G  P+ L+ Y +++ L  +A   + A + ++ M   G +P+   Y++
Sbjct: 132 DHASSLFDEMIRGGHHPDRLMFYELILGL-CQAGKVKDASERFKQMPKHGCQPNVPVYNV 190

Query: 541 VMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAG 600
           ++  L   G L++A  +FAEM+  +  PD   Y  L+D   KA  V +  + +EAM  AG
Sbjct: 191 LLHGLCSSGQLEQANTLFAEMKSHSCSPDVVTYNTLLDAVCKARRVEEGCKLFEAMRAAG 250

Query: 601 LRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
             PNV T ++L+    R G+L  A  +   ML  G KP+  TYT L+S
Sbjct: 251 YVPNVITFSTLIHGLCRTGELEKALEVFGSMLEAGCKPNKYTYTTLIS 298



 Score =  155 bits (392), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 118/426 (27%), Positives = 208/426 (48%), Gaps = 19/426 (4%)

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
           ++G+K D  +Y  ++  L +  +     K+L +MV  G  P++  Y+ L+ +  +A  ++
Sbjct: 73  ESGYKPDNVSYHILIHGLAKIGKLDESLKILSEMVMRGQTPSMQAYSSLVRALAKARRVD 132

Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
            A  +F +M   G  PDR+ +  LI    +AG +  A + +K+M   G  P+   Y+V++
Sbjct: 133 HASSLFDEMIRGGHHPDRLMFYELILGLCQAGKVKDASERFKQMPKHGCQPNVPVYNVLL 192

Query: 473 NCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFE 532
           + L  +G L+ A+ LF EM +  C P++VTYN ++    KAR  +   KL+  M+ AG+ 
Sbjct: 193 HGLCSSGQLEQANTLFAEMKSHSCSPDVVTYNTLLDAVCKARRVEEGCKLFEAMRAAGYV 252

Query: 533 PDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEW 592
           P+ +T+S ++  L   G L++A  VF  M      P++  Y  L+    +A  V +A E 
Sbjct: 253 PNVITFSTLIHGLCRTGELEKALEVFGSMLEAGCKPNKYTYTTLISGLCRAEKVIQAREL 312

Query: 593 YEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGML-NLGLKPSLQTY-TLLLSCC 650
           +E M QA + P+    NSL++ + + G + +A  L + M    GL+P++ T+ TL+   C
Sbjct: 313 FEKMTQACIPPDAVAYNSLIAGYCKRGSMDEAEKLYREMSGGAGLQPTIVTFNTLIDGFC 372

Query: 651 TEARSPYDMGFCHEL---MAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRE 707
              +    +G  +EL   M   G  A      +   G       D      + M    RE
Sbjct: 373 KLGK----LGRANELVAEMGTKGLAADSCTYRILIAGLSRATKLDEALEVYKQM----RE 424

Query: 708 SKRGLVDAV-----VDFLHKSGLKEEAGSVWEVAAQKNVYPDAVKEKGMSYWLINLHVMS 762
            K+ L+D V     V  L K+G  ++A +V+E   +    P+    + +S  LI L  + 
Sbjct: 425 -KKFLLDPVSCVSFVGGLCKTGNIDQAYAVFEATRKSGAVPNPETFRILSESLIKLGRVE 483

Query: 763 DGTAVI 768
           D   ++
Sbjct: 484 DAQKLM 489



 Score =  142 bits (358), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 92/302 (30%), Positives = 149/302 (49%), Gaps = 15/302 (4%)

Query: 329 QANQVLKQLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVR 388
           QAN +  +++ H+ +               D  TY T++  + +AR+     KL + M  
Sbjct: 203 QANTLFAEMKSHSCS--------------PDVVTYNTLLDAVCKARRVEEGCKLFEAMRA 248

Query: 389 DGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDV 448
            G  PNV+T++ LIH   R   L +AL+VF  M   GC+P++ TY TLI    +A  +  
Sbjct: 249 AGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLEAGCKPNKYTYTTLISGLCRAEKVIQ 308

Query: 449 AMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVN-QGCIPNLVTYNIMI 507
           A ++++KM  A + PD   Y+ +I    K G +  A +L+ EM    G  P +VT+N +I
Sbjct: 309 ARELFEKMTQACIPPDAVAYNSLIAGYCKRGSMDEAEKLYREMSGGAGLQPTIVTFNTLI 368

Query: 508 ALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWV 567
               K      A +L  +M   G   D  TY I++  L     LDEA  V+ +MR K ++
Sbjct: 369 DGFCKLGKLGRANELVAEMGTKGLAADSCTYRILIAGLSRATKLDEALEVYKQMREKKFL 428

Query: 568 PDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHL 627
            D       V    K GN+ +A+  +EA  ++G  PN  T   L  + +++G++ DA  L
Sbjct: 429 LDPVSCVSFVGGLCKTGNIDQAYAVFEATRKSGAVPNPETFRILSESLIKLGRVEDAQKL 488

Query: 628 LQ 629
           ++
Sbjct: 489 ME 490



 Score =  133 bits (334), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 78/295 (26%), Positives = 143/295 (48%)

Query: 354 AGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNE 413
           AG   D   +  ++    R+       ++   MV  G +P+ V+Y+ LIH   +   L+E
Sbjct: 39  AGCNPDVFAFNGVMQGFARSNNMEKAREVYQHMVESGYKPDNVSYHILIHGLAKIGKLDE 98

Query: 414 ALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIIN 473
           +L +  +M + G  P    Y +L+   AKA  +D A  ++ +M   G  PD   +  +I 
Sbjct: 99  SLKILSEMVMRGQTPSMQAYSSLVRALAKARRVDHASSLFDEMIRGGHHPDRLMFYELIL 158

Query: 474 CLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEP 533
            L +AG ++ A + F +M   GC PN+  YN+++     +   + A  L+ +M++    P
Sbjct: 159 GLCQAGKVKDASERFKQMPKHGCQPNVPVYNVLLHGLCSSGQLEQANTLFAEMKSHSCSP 218

Query: 534 DKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWY 593
           D VTY+ +++ +     ++E   +F  MR   +VP+   +  L+    + G + KA E +
Sbjct: 219 DVVTYNTLLDAVCKARRVEEGCKLFEAMRAAGYVPNVITFSTLIHGLCRTGELEKALEVF 278

Query: 594 EAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
            +ML+AG +PN  T  +L+S   R  ++  A  L + M    + P    Y  L++
Sbjct: 279 GSMLEAGCKPNKYTYTTLISGLCRAEKVIQARELFEKMTQACIPPDAVAYNSLIA 333



 Score =  107 bits (267), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 84/319 (26%), Positives = 146/319 (45%), Gaps = 8/319 (2%)

Query: 432 TYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEM 491
           TY ++I    K    + +  + ++M AAG +PD F ++ ++    ++ +++ A +++  M
Sbjct: 12  TYSSIIKSLVKEAKPEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNNMEKAREVYQHM 71

Query: 492 VNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYL 551
           V  G  P+ V+Y+I+I   AK      +LK+  +M   G  P    YS ++  L     +
Sbjct: 72  VESGYKPDNVSYHILIHGLAKIGKLDESLKILSEMVMRGQTPSMQAYSSLVRALAKARRV 131

Query: 552 DEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSL 611
           D A ++F EM R    PD  ++  L+    +AG V+ A E ++ M + G +PNVP  N L
Sbjct: 132 DHASSLFDEMIRGGHHPDRLMFYELILGLCQAGKVKDASERFKQMPKHGCQPNVPVYNVL 191

Query: 612 LSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGFCHELMAVSGH 671
           L      GQL  A  L   M +    P + TY  LL    +AR   +     E M  +G+
Sbjct: 192 LHGLCSSGQLEQANTLFAEMKSHSCSPDVVTYNTLLDAVCKARRVEEGCKLFEAMRAAGY 251

Query: 672 PAHMFLLSMPSPG----PDGQNVRDHVGSFLEMMHSEDRESKRGLVDAVVDFLHKSGLKE 727
             ++   S    G     + +   +  GS LE     ++ +   L+      L ++    
Sbjct: 252 VPNVITFSTLIHGLCRTGELEKALEVFGSMLEAGCKPNKYTYTTLISG----LCRAEKVI 307

Query: 728 EAGSVWEVAAQKNVYPDAV 746
           +A  ++E   Q  + PDAV
Sbjct: 308 QARELFEKMTQACIPPDAV 326



 Score = 58.5 bits (140), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 47/222 (21%), Positives = 99/222 (44%), Gaps = 2/222 (0%)

Query: 526 MQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGN 585
           M++     +  TYS +++ L      +E+  V  EM      PD   +  ++  + ++ N
Sbjct: 1   MRDKNIAANVFTYSSIIKSLVKEAKPEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNN 60

Query: 586 VRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTL 645
           + KA E Y+ M+++G +P+  + + L+    ++G+L ++  +L  M+  G  PS+Q Y+ 
Sbjct: 61  MEKAREVYQHMVESGYKPDNVSYHILIHGLAKIGKLDESLKILSEMVMRGQTPSMQAYSS 120

Query: 646 LLSCCTEARS-PYDMGFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSE 704
           L+    +AR   +      E++    HP  +    +         V+D    F + M   
Sbjct: 121 LVRALAKARRVDHASSLFDEMIRGGHHPDRLMFYELILGLCQAGKVKDASERF-KQMPKH 179

Query: 705 DRESKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAV 746
             +    + + ++  L  SG  E+A +++      +  PD V
Sbjct: 180 GCQPNVPVYNVLLHGLCSSGQLEQANTLFAEMKSHSCSPDVV 221


>gi|297736854|emb|CBI26055.3| unnamed protein product [Vitis vinifera]
          Length = 653

 Score =  157 bits (396), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 112/384 (29%), Positives = 180/384 (46%), Gaps = 18/384 (4%)

Query: 269 ERFSKPSREMKIPAGLA--PFSRHFASTGNVVESVSRILRQWKWGPLAEEALGNTNYSMD 326
           E F +  +  K+P   A       + S G   E+   + RQ   G +          S+ 
Sbjct: 76  ELFEQLEQNRKVPCAYAYNTMIMGYGSAGKFDEAYGLLERQKAKGSIP---------SVI 126

Query: 327 AYQANQVLKQLQDH---TVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLL 383
           AY  N +L  L        AL  F  ++R A    +  TY  ++ +L R  +  A  ++ 
Sbjct: 127 AY--NCILTCLGKKRRVEEALRIFEEMKRDA--VPNVPTYNILIDMLCREGKLNAALEIR 182

Query: 384 DQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKA 443
           D M R G  PNV+T N +I    +A  L EA  +F+ M    C P+ VT+ +LID   K 
Sbjct: 183 DDMERAGLFPNVLTVNIMIDRLCKAQKLEEACSIFEGMDDKVCTPNAVTFSSLIDGLGKC 242

Query: 444 GFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTY 503
           G +D A  +Y+KM   G  P    Y+ +I    K G  +  H+++ EMV+ GC P+L   
Sbjct: 243 GRVDDAYSLYEKMLDCGHVPGAIVYTSLIRSFFKCGRKEDGHKIYKEMVHTGCSPDLTLI 302

Query: 504 NIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRR 563
           N  +    KA   +    L+R++   GF PD  +YSI++  L   G  +E   +F  M+ 
Sbjct: 303 NTYMDCVFKAGETEKGRALFREINAHGFIPDARSYSILIHGLVKAGLANETYELFYAMKE 362

Query: 564 KNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSD 623
           +  V D   Y  ++D + K+G V KA++  E M   G  P V T  S++    ++ +L +
Sbjct: 363 QGCVLDTHAYNAVIDGFCKSGKVNKAYQLLEEMKVKGHPPTVVTYGSVIDGLAKIDRLDE 422

Query: 624 AYHLLQGMLNLGLKPSLQTYTLLL 647
           AY L +   + G+K ++  Y+ L+
Sbjct: 423 AYMLFEEAKSNGIKLNVVVYSSLI 446



 Score =  151 bits (381), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 96/337 (28%), Positives = 164/337 (48%), Gaps = 1/337 (0%)

Query: 362 TYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQM 421
           T+++++  LG+  +      L ++M+  G  P  + Y  LI S+ +     +   ++K+M
Sbjct: 231 TFSSLIDGLGKCGRVDDAYSLYEKMLDCGHVPGAIVYTSLIRSFFKCGRKEDGHKIYKEM 290

Query: 422 QVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHL 481
              GC PD     T +D   KAG  +    +++++ A G  PD  +YS++I+ L KAG  
Sbjct: 291 VHTGCSPDLTLINTYMDCVFKAGETEKGRALFREINAHGFIPDARSYSILIHGLVKAGLA 350

Query: 482 QAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIV 541
              ++LF  M  QGC+ +   YN +I    K+     A +L  +M+  G  P  VTY  V
Sbjct: 351 NETYELFYAMKEQGCVLDTHAYNAVIDGFCKSGKVNKAYQLLEEMKVKGHPPTVVTYGSV 410

Query: 542 MEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGL 601
           ++ L     LDEA  +F E +      +  VY  L+D +GK G + +A+   E ++Q GL
Sbjct: 411 IDGLAKIDRLDEAYMLFEEAKSNGIKLNVVVYSSLIDGFGKVGRIDEAYLIMEELMQKGL 470

Query: 602 RPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS-CCTEARSPYDMG 660
            PNV T N LL A ++  ++++A    Q M +L   P+  TY++L++  C   +      
Sbjct: 471 TPNVYTWNCLLDALVKAEEINEALICFQSMKDLKCPPNQITYSILINGLCRVRKFNKAFV 530

Query: 661 FCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSF 697
           F  E+  +   P  +   +M S      N+ +  G F
Sbjct: 531 FWQEMQKLGLKPNTITYTTMISGLAKAGNILEASGLF 567



 Score =  135 bits (340), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 86/310 (27%), Positives = 150/310 (48%), Gaps = 11/310 (3%)

Query: 354 AGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYG------- 406
           +GF    +    +V    ++R+      ++  M +   +P    Y  LI   G       
Sbjct: 4   SGFGPSSNISIELVANCVKSRKLREAFDIIQTMRKFKFRPAFSAYTILIGKVGLMLLFPW 63

Query: 407 ---RANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSP 463
              +AN L+EA+++F+Q++     P    Y T+I  +  AG  D A  + ++ +A G  P
Sbjct: 64  VLCKANRLDEAVELFEQLEQNRKVPCAYAYNTMIMGYGSAGKFDEAYGLLERQKAKGSIP 123

Query: 464 DTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLY 523
               Y+ I+ CLGK   ++ A ++F EM  +  +PN+ TYNI+I +  +     +AL++ 
Sbjct: 124 SVIAYNCILTCLGKKRRVEEALRIFEEM-KRDAVPNVPTYNILIDMLCREGKLNAALEIR 182

Query: 524 RDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKA 583
            DM+ AG  P+ +T +I+++ L     L+EA ++F  M  K   P+   +  L+D  GK 
Sbjct: 183 DDMERAGLFPNVLTVNIMIDRLCKAQKLEEACSIFEGMDDKVCTPNAVTFSSLIDGLGKC 242

Query: 584 GNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTY 643
           G V  A+  YE ML  G  P      SL+ +F + G+  D + + + M++ G  P L   
Sbjct: 243 GRVDDAYSLYEKMLDCGHVPGAIVYTSLIRSFFKCGRKEDGHKIYKEMVHTGCSPDLTLI 302

Query: 644 TLLLSCCTEA 653
              + C  +A
Sbjct: 303 NTYMDCVFKA 312



 Score =  128 bits (322), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 72/276 (26%), Positives = 135/276 (48%)

Query: 349 WLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRA 408
           +  ++ G   D H Y  ++    ++ +     +LL++M   G  P VVTY  +I    + 
Sbjct: 358 YAMKEQGCVLDTHAYNAVIDGFCKSGKVNKAYQLLEEMKVKGHPPTVVTYGSVIDGLAKI 417

Query: 409 NYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTY 468
           + L+EA  +F++ +  G + + V Y +LID   K G +D A  + +++   GL+P+ +T+
Sbjct: 418 DRLDEAYMLFEEAKSNGIKLNVVVYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTW 477

Query: 469 SVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQN 528
           + +++ L KA  +  A   F  M +  C PN +TY+I+I    + R +  A   +++MQ 
Sbjct: 478 NCLLDALVKAEEINEALICFQSMKDLKCPPNQITYSILINGLCRVRKFNKAFVFWQEMQK 537

Query: 529 AGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRK 588
            G +P+ +TY+ ++  L   G + EA  +F+  +    +PD   Y  +++    A     
Sbjct: 538 LGLKPNTITYTTMISGLAKAGNILEASGLFSRFKANGGIPDSASYNAMIEGLSSANKAMD 597

Query: 589 AWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDA 624
           A+  +E     G   +  TC  LL A  +   L  A
Sbjct: 598 AYALFEETRLKGCNIHTKTCVVLLDALHKAECLEQA 633



 Score =  120 bits (300), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 80/316 (25%), Positives = 150/316 (47%), Gaps = 7/316 (2%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           GF  D  +Y+ ++  L +A       +L   M   GC  +   YN +I  + ++  +N+A
Sbjct: 329 GFIPDARSYSILIHGLVKAGLANETYELFYAMKEQGCVLDTHAYNAVIDGFCKSGKVNKA 388

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
             + ++M+V G  P  VTY ++ID  AK   LD A  ++++ ++ G+  +   YS +I+ 
Sbjct: 389 YQLLEEMKVKGHPPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGIKLNVVVYSSLIDG 448

Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPD 534
            GK G +  A+ +  E++ +G  PN+ T+N ++    KA     AL  ++ M++    P+
Sbjct: 449 FGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEINEALICFQSMKDLKCPPN 508

Query: 535 KVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYE 594
           ++TYSI++  L      ++A   + EM++    P+   Y  ++    KAGN+ +A   + 
Sbjct: 509 QITYSILINGLCRVRKFNKAFVFWQEMQKLGLKPNTITYTTMISGLAKAGNILEASGLFS 568

Query: 595 AMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEAR 654
                G  P+  + N+++       +  DAY L +     G     +T  +LL    +A 
Sbjct: 569 RFKANGGIPDSASYNAMIEGLSSANKAMDAYALFEETRLKGCNIHTKTCVVLLDALHKAE 628

Query: 655 SPYDMGFCHELMAVSG 670
                  C E  A+ G
Sbjct: 629 -------CLEQAAIVG 637



 Score =  106 bits (264), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 78/324 (24%), Positives = 144/324 (44%), Gaps = 11/324 (3%)

Query: 346 FFNWLRRQAGFK-HDEHTYT----------TMVGILGRARQFGAINKLLDQMVRDGCQPN 394
           FF   R++ G K + E  +T          T +  + +A +      L  ++   G  P+
Sbjct: 274 FFKCGRKEDGHKIYKEMVHTGCSPDLTLINTYMDCVFKAGETEKGRALFREINAHGFIPD 333

Query: 395 VVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYK 454
             +Y+ LIH   +A   NE  ++F  M+  GC  D   Y  +ID   K+G ++ A  + +
Sbjct: 334 ARSYSILIHGLVKAGLANETYELFYAMKEQGCVLDTHAYNAVIDGFCKSGKVNKAYQLLE 393

Query: 455 KMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKAR 514
           +M+  G  P   TY  +I+ L K   L  A+ LF E  + G   N+V Y+ +I    K  
Sbjct: 394 EMKVKGHPPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGIKLNVVVYSSLIDGFGKVG 453

Query: 515 NYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYG 574
               A  +  ++   G  P+  T++ +++ L     ++EA   F  M+     P++  Y 
Sbjct: 454 RIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEINEALICFQSMKDLKCPPNQITYS 513

Query: 575 LLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNL 634
           +L++   +     KA+ +++ M + GL+PN  T  +++S   + G + +A  L       
Sbjct: 514 ILINGLCRVRKFNKAFVFWQEMQKLGLKPNTITYTTMISGLAKAGNILEASGLFSRFKAN 573

Query: 635 GLKPSLQTYTLLLSCCTEARSPYD 658
           G  P   +Y  ++   + A    D
Sbjct: 574 GGIPDSASYNAMIEGLSSANKAMD 597



 Score =  100 bits (248), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 58/209 (27%), Positives = 109/209 (52%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           G K +   Y++++   G+  +      +++++++ G  PNV T+N L+ +  +A  +NEA
Sbjct: 434 GIKLNVVVYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEINEA 493

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
           L  F+ M+ + C P+++TY  LI+   +    + A   +++MQ  GL P+T TY+ +I+ 
Sbjct: 494 LICFQSMKDLKCPPNQITYSILINGLCRVRKFNKAFVFWQEMQKLGLKPNTITYTTMISG 553

Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPD 534
           L KAG++  A  LF      G IP+  +YN MI   + A     A  L+ + +  G    
Sbjct: 554 LAKAGNILEASGLFSRFKANGGIPDSASYNAMIEGLSSANKAMDAYALFEETRLKGCNIH 613

Query: 535 KVTYSIVMEVLGHCGYLDEAEAVFAEMRR 563
             T  ++++ L     L++A  V A ++ 
Sbjct: 614 TKTCVVLLDALHKAECLEQAAIVGAVLKE 642



 Score = 94.7 bits (234), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 84/339 (24%), Positives = 144/339 (42%), Gaps = 19/339 (5%)

Query: 421 MQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLG---- 476
           M + G  P       L+    K+  L  A D+ + M+     P    Y+++I  +G    
Sbjct: 1   MSLSGFGPSSNISIELVANCVKSRKLREAFDIIQTMRKFKFRPAFSAYTILIGKVGLMLL 60

Query: 477 ------KAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAG 530
                 KA  L  A +LF ++     +P    YN MI     A  +  A  L    +  G
Sbjct: 61  FPWVLCKANRLDEAVELFEQLEQNRKVPCAYAYNTMIMGYGSAGKFDEAYGLLERQKAKG 120

Query: 531 FEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAW 590
             P  + Y+ ++  LG    ++EA  +F EM+R + VP+ P Y +L+D+  + G +  A 
Sbjct: 121 SIPSVIAYNCILTCLGKKRRVEEALRIFEEMKR-DAVPNVPTYNILIDMLCREGKLNAAL 179

Query: 591 EWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLL---L 647
           E  + M +AGL PNV T N ++    +  +L +A  + +GM +    P+  T++ L   L
Sbjct: 180 EIRDDMERAGLFPNVLTVNIMIDRLCKAQKLEEACSIFEGMDDKVCTPNAVTFSSLIDGL 239

Query: 648 SCCTEARSPYDMGFCHELMAVSGH-PAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDR 706
             C      Y +   +E M   GH P  +   S+           D    + EM+H+   
Sbjct: 240 GKCGRVDDAYSL---YEKMLDCGHVPGAIVYTSLIRSFFKCGRKEDGHKIYKEMVHT-GC 295

Query: 707 ESKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDA 745
                L++  +D + K+G  E+  +++         PDA
Sbjct: 296 SPDLTLINTYMDCVFKAGETEKGRALFREINAHGFIPDA 334



 Score = 50.8 bits (120), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 60/243 (24%), Positives = 99/243 (40%), Gaps = 35/243 (14%)

Query: 526 MQNAGFEPDKVTYSIVMEVLGHC---GYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWG- 581
           M  +GF P   + +I +E++ +C     L EA  +   MR+  + P    Y +L+   G 
Sbjct: 1   MSLSGFGP---SSNISIELVANCVKSRKLREAFDIIQTMRKFKFRPAFSAYTILIGKVGL 57

Query: 582 ---------KAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGML 632
                    KA  + +A E +E + Q    P     N+++  +   G+  +AY LL+   
Sbjct: 58  MLLFPWVLCKANRLDEAVELFEQLEQNRKVPCAYAYNTMIMGYGSAGKFDEAYGLLERQK 117

Query: 633 NLGLKPSLQTYTLLLSCCTEARSPYDMGFCHELM---AVSGHPAHMFLLSMPSPGPDGQN 689
             G  PS+  Y  +L+C  + R   +     E M   AV   P +  L+ M         
Sbjct: 118 AKGSIPSVIAYNCILTCLGKKRRVEEALRIFEEMKRDAVPNVPTYNILIDMLC------- 170

Query: 690 VRDHVGSFLEMMHSEDRESKRGL------VDAVVDFLHKSGLKEEAGSVWEVAAQKNVYP 743
                G     +   D   + GL      V+ ++D L K+   EEA S++E    K   P
Sbjct: 171 ---REGKLNAALEIRDDMERAGLFPNVLTVNIMIDRLCKAQKLEEACSIFEGMDDKVCTP 227

Query: 744 DAV 746
           +AV
Sbjct: 228 NAV 230


>gi|218184541|gb|EEC66968.1| hypothetical protein OsI_33625 [Oryza sativa Indica Group]
          Length = 1351

 Score =  157 bits (396), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 101/362 (27%), Positives = 180/362 (49%), Gaps = 15/362 (4%)

Query: 284  LAPFSRHFASTGNVVESVSRILRQWKWGPLAEEALGNTNYSMDAYQANQVLKQLQDHT-- 341
            L P  +H       +E+   +++++K          +   S+     N ++  L D    
Sbjct: 802  LCPLIKHLCKQKKALEA-HELVKKFK----------SFGVSLKTGSYNSLICGLVDENLI 850

Query: 342  -VALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNR 400
             +A G F  ++ + G   DE TY  ++  +G++ +   + K+ ++M R G +   VTYN 
Sbjct: 851  DIAEGLFAEMK-ELGCGPDEFTYNLLLDAMGKSMRIEEMLKVQEEMHRKGYESTYVTYNT 909

Query: 401  LIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAG 460
            +I    ++  L +A+D++  +   G  P   TY  L+D   KAG ++ A +++ +M   G
Sbjct: 910  IISGLVKSRRLEQAIDLYYNLMSQGFSPTPCTYGPLLDGLLKAGRIEDAENLFNEMLEYG 969

Query: 461  LSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSAL 520
               +   Y++++N    AG+ +    LF +MV+QG  P++ +Y I+I    KA      L
Sbjct: 970  CKANCTIYNILLNGHRIAGNTEKVCHLFQDMVDQGINPDIKSYTIIIDTLCKAGQLNDGL 1029

Query: 521  KLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLW 580
              +R +   G EPD +TY+++++ LG    L+EA ++F EM++K  VP+   Y  L+   
Sbjct: 1030 TYFRQLLEMGLEPDLITYNLLIDGLGKSKRLEEAVSLFNEMQKKGIVPNLYTYNSLILHL 1089

Query: 581  GKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSL 640
            GKAG   +A + YE +L  G +PNV T N+L+  +   G    AY     M+  G  P+ 
Sbjct: 1090 GKAGKAAEAGKMYEELLTKGWKPNVFTYNALIRGYSVSGSTDSAYAAYGRMIVGGCLPNS 1149

Query: 641  QT 642
             T
Sbjct: 1150 ST 1151



 Score =  156 bits (395), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 96/334 (28%), Positives = 166/334 (49%), Gaps = 2/334 (0%)

Query: 316  EALGNTNYSMDAYQANQVLKQLQDHTVALGFFNWLRRQAGFKHDEHT--YTTMVGILGRA 373
            E + ++  ++D +    ++K L     AL     +++   F     T  Y +++  L   
Sbjct: 788  EIIASSGITLDDFFLCPLIKHLCKQKKALEAHELVKKFKSFGVSLKTGSYNSLICGLVDE 847

Query: 374  RQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTY 433
                    L  +M   GC P+  TYN L+ + G++  + E L V ++M   G E   VTY
Sbjct: 848  NLIDIAEGLFAEMKELGCGPDEFTYNLLLDAMGKSMRIEEMLKVQEEMHRKGYESTYVTY 907

Query: 434  CTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVN 493
             T+I    K+  L+ A+D+Y  + + G SP   TY  +++ L KAG ++ A  LF EM+ 
Sbjct: 908  NTIISGLVKSRRLEQAIDLYYNLMSQGFSPTPCTYGPLLDGLLKAGRIEDAENLFNEMLE 967

Query: 494  QGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDE 553
             GC  N   YNI++     A N +    L++DM + G  PD  +Y+I+++ L   G L++
Sbjct: 968  YGCKANCTIYNILLNGHRIAGNTEKVCHLFQDMVDQGINPDIKSYTIIIDTLCKAGQLND 1027

Query: 554  AEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLS 613
                F ++      PD   Y LL+D  GK+  + +A   +  M + G+ PN+ T NSL+ 
Sbjct: 1028 GLTYFRQLLEMGLEPDLITYNLLIDGLGKSKRLEEAVSLFNEMQKKGIVPNLYTYNSLIL 1087

Query: 614  AFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
               + G+ ++A  + + +L  G KP++ TY  L+
Sbjct: 1088 HLGKAGKAAEAGKMYEELLTKGWKPNVFTYNALI 1121



 Score =  151 bits (382), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 91/313 (29%), Positives = 160/313 (51%), Gaps = 39/313 (12%)

Query: 349 WLRRQA---GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSY 405
           WL R+    G K + ++YT  + +LG+AR+F    ++L +M  +GC+P+V+T+  LI   
Sbjct: 295 WLLREMEAHGVKPNVYSYTICIRVLGQARRFDEAYRILAEMENEGCKPDVITHTVLIQVL 354

Query: 406 GRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDT 465
             A  +++A DVF +M+    +PDRVTY TL+D  A  G     M+++  M+A G + + 
Sbjct: 355 CDAGRISDAKDVFWKMKKSDQKPDRVTYITLLDKFADNGESQSVMEIWNAMKADGYNDNV 414

Query: 466 FTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRD 525
             Y+ +I+ L + G +  A ++F EM  +G +P   +YN +I+   KA  +  AL+L++ 
Sbjct: 415 VAYTAVIDALCQVGRVFEALEMFDEMKQKGIVPEQYSYNSLISGFLKADRFGDALELFKY 474

Query: 526 MQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGN 585
           M   G +P+  T+                                    L ++ +GK+G 
Sbjct: 475 MDIHGPKPNGYTHV-----------------------------------LFINYYGKSGE 499

Query: 586 VRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTL 645
             KA + YE M   G+ P+V   N++L    + G+L  A  +   +  +G+ P   TYT+
Sbjct: 500 SIKAIQRYELMKSKGIVPDVVAGNAVLFGLAKSGRLGMAKRVFHELKAMGVSPDTITYTM 559

Query: 646 LLSCCTEARSPYD 658
           ++ CC++A S +D
Sbjct: 560 MIKCCSKA-SKFD 571



 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 87/301 (28%), Positives = 157/301 (52%)

Query: 349 WLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRA 408
           W  +++  K D  TY T++       +  ++ ++ + M  DG   NVV Y  +I +  + 
Sbjct: 368 WKMKKSDQKPDRVTYITLLDKFADNGESQSVMEIWNAMKADGYNDNVVAYTAVIDALCQV 427

Query: 409 NYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTY 468
             + EAL++F +M+  G  P++ +Y +LI    KA     A++++K M   G  P+ +T+
Sbjct: 428 GRVFEALEMFDEMKQKGIVPEQYSYNSLISGFLKADRFGDALELFKYMDIHGPKPNGYTH 487

Query: 469 SVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQN 528
            + IN  GK+G    A Q +  M ++G +P++V  N ++   AK+     A +++ +++ 
Sbjct: 488 VLFINYYGKSGESIKAIQRYELMKSKGIVPDVVAGNAVLFGLAKSGRLGMAKRVFHELKA 547

Query: 529 AGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRK 588
            G  PD +TY+++++        DEA  +F +M   N VPD  V   L+D   KAG   +
Sbjct: 548 MGVSPDTITYTMMIKCCSKASKFDEAVKIFYDMIENNCVPDVLVVNSLIDTLYKAGRGDE 607

Query: 589 AWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
           AW+ +  + +  L P   T N+LL+   R G++ +  HLL+ M +    P+L TY  +L 
Sbjct: 608 AWQIFYQLKEMNLEPTDGTYNTLLAGLGREGKVKEVMHLLEEMYHSNYPPNLITYNTILD 667

Query: 649 C 649
           C
Sbjct: 668 C 668



 Score =  145 bits (365), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 86/302 (28%), Positives = 155/302 (51%), Gaps = 3/302 (0%)

Query: 355 GFKHDEHTYTTMVGILGR-ARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNE 413
           G+  +   YT ++  L +  R F A+ ++ D+M + G  P   +YN LI  + +A+   +
Sbjct: 409 GYNDNVVAYTAVIDALCQVGRVFEAL-EMFDEMKQKGIVPEQYSYNSLISGFLKADRFGD 467

Query: 414 ALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIIN 473
           AL++FK M + G +P+  T+   I+ + K+G    A+  Y+ M++ G+ PD    + ++ 
Sbjct: 468 ALELFKYMDIHGPKPNGYTHVLFINYYGKSGESIKAIQRYELMKSKGIVPDVVAGNAVLF 527

Query: 474 CLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEP 533
            L K+G L  A ++F E+   G  P+ +TY +MI   +KA  +  A+K++ DM      P
Sbjct: 528 GLAKSGRLGMAKRVFHELKAMGVSPDTITYTMMIKCCSKASKFDEAVKIFYDMIENNCVP 587

Query: 534 DKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWY 593
           D +  + +++ L   G  DEA  +F +++  N  P +  Y  L+   G+ G V++     
Sbjct: 588 DVLVVNSLIDTLYKAGRGDEAWQIFYQLKEMNLEPTDGTYNTLLAGLGREGKVKEVMHLL 647

Query: 594 EAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTY-TLLLSCCTE 652
           E M  +   PN+ T N++L    + G ++DA  +L  M   G  P L +Y T++     E
Sbjct: 648 EEMYHSNYPPNLITYNTILDCLCKNGAVNDALDMLYSMTTKGCIPDLSSYNTVIYGLVKE 707

Query: 653 AR 654
            R
Sbjct: 708 ER 709



 Score =  136 bits (343), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 86/321 (26%), Positives = 159/321 (49%), Gaps = 4/321 (1%)

Query: 331 NQVLKQLQDHTVA---LGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMV 387
           N +L  ++DH         F+ ++RQ   K +  T+  + G LG      +    L  M 
Sbjct: 173 NYMLDLMRDHGRVGDMAEVFDVMQRQI-VKANVGTFAAIFGGLGVEGGLRSAPVALPVMK 231

Query: 388 RDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLD 447
             G   N  TYN L++   ++ +  EAL+V+K M V G  P   TY  L+    K   ++
Sbjct: 232 EAGIVLNAYTYNGLVYFLVKSGFDREALEVYKVMMVDGVVPSVRTYSVLMVAFGKRRDVE 291

Query: 448 VAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMI 507
             + + ++M+A G+ P+ ++Y++ I  LG+A     A+++  EM N+GC P+++T+ ++I
Sbjct: 292 TVLWLLREMEAHGVKPNVYSYTICIRVLGQARRFDEAYRILAEMENEGCKPDVITHTVLI 351

Query: 508 ALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWV 567
            +   A     A  ++  M+ +  +PD+VTY  +++     G       ++  M+   + 
Sbjct: 352 QVLCDAGRISDAKDVFWKMKKSDQKPDRVTYITLLDKFADNGESQSVMEIWNAMKADGYN 411

Query: 568 PDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHL 627
            +   Y  ++D   + G V +A E ++ M Q G+ P   + NSL+S FL+  +  DA  L
Sbjct: 412 DNVVAYTAVIDALCQVGRVFEALEMFDEMKQKGIVPEQYSYNSLISGFLKADRFGDALEL 471

Query: 628 LQGMLNLGLKPSLQTYTLLLS 648
            + M   G KP+  T+ L ++
Sbjct: 472 FKYMDIHGPKPNGYTHVLFIN 492



 Score =  136 bits (342), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 79/283 (27%), Positives = 144/283 (50%), Gaps = 4/283 (1%)

Query: 353  QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
            + G++    TY T++  L ++R+      L   ++  G  P   TY  L+    +A  + 
Sbjct: 897  RKGYESTYVTYNTIISGLVKSRRLEQAIDLYYNLMSQGFSPTPCTYGPLLDGLLKAGRIE 956

Query: 413  EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
            +A ++F +M   GC+ +   Y  L++ H  AG  +    +++ M   G++PD  +Y++II
Sbjct: 957  DAENLFNEMLEYGCKANCTIYNILLNGHRIAGNTEKVCHLFQDMVDQGINPDIKSYTIII 1016

Query: 473  NCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFE 532
            + L KAG L      F +++  G  P+L+TYN++I    K++  + A+ L+ +MQ  G  
Sbjct: 1017 DTLCKAGQLNDGLTYFRQLLEMGLEPDLITYNLLIDGLGKSKRLEEAVSLFNEMQKKGIV 1076

Query: 533  PDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEW 592
            P+  TY+ ++  LG  G   EA  ++ E+  K W P+   Y  L+  +  +G+   A+  
Sbjct: 1077 PNLYTYNSLILHLGKAGKAAEAGKMYEELLTKGWKPNVFTYNALIRGYSVSGSTDSAYAA 1136

Query: 593  YEAMLQAGLRPNVPTC--NSLLSAFLRVGQLSDAYHLLQGMLN 633
            Y  M+  G  PN  TC  + L+  FL+    SD+Y ++   +N
Sbjct: 1137 YGRMIVGGCLPNSSTCHIHELMKTFLKGD--SDSYEIIVTFIN 1177



 Score =  130 bits (327), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 104/406 (25%), Positives = 183/406 (45%), Gaps = 4/406 (0%)

Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLI 402
           AL  F    R+    H   +   M+ ++    + G + ++ D M R   + NV T+  + 
Sbjct: 152 ALERFRSAARRPRVVHTTASCNYMLDLMRDHGRVGDMAEVFDVMQRQIVKANVGTFAAIF 211

Query: 403 HSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLS 462
              G    L  A      M+  G   +  TY  L+    K+GF   A+++YK M   G+ 
Sbjct: 212 GGLGVEGGLRSAPVALPVMKEAGIVLNAYTYNGLVYFLVKSGFDREALEVYKVMMVDGVV 271

Query: 463 PDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKL 522
           P   TYSV++   GK   ++    L  EM   G  PN+ +Y I I +  +AR +  A ++
Sbjct: 272 PSVRTYSVLMVAFGKRRDVETVLWLLREMEAHGVKPNVYSYTICIRVLGQARRFDEAYRI 331

Query: 523 YRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGK 582
             +M+N G +PD +T++++++VL   G + +A+ VF +M++ +  PD   Y  L+D +  
Sbjct: 332 LAEMENEGCKPDVITHTVLIQVLCDAGRISDAKDVFWKMKKSDQKPDRVTYITLLDKFAD 391

Query: 583 AGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQT 642
            G  +   E + AM   G   NV    +++ A  +VG++ +A  +   M   G+ P   +
Sbjct: 392 NGESQSVMEIWNAMKADGYNDNVVAYTAVIDALCQVGRVFEALEMFDEMKQKGIVPEQYS 451

Query: 643 YTLLLSCCTEARSPYDMGFCHELMAVSGHP--AHMFLLSMPSPGPDGQNVRDHVGSFLEM 700
           Y  L+S   +A    D     + M + G     +  +L +   G  G++++       E+
Sbjct: 452 YNSLISGFLKADRFGDALELFKYMDIHGPKPNGYTHVLFINYYGKSGESIK--AIQRYEL 509

Query: 701 MHSEDRESKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAV 746
           M S+         +AV+  L KSG    A  V+       V PD +
Sbjct: 510 MKSKGIVPDVVAGNAVLFGLAKSGRLGMAKRVFHELKAMGVSPDTI 555



 Score =  129 bits (325), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 79/305 (25%), Positives = 155/305 (50%), Gaps = 2/305 (0%)

Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLI 402
           AL  F+ ++ Q G   ++++Y +++    +A +FG   +L   M   G +PN  T+   I
Sbjct: 433 ALEMFDEMK-QKGIVPEQYSYNSLISGFLKADRFGDALELFKYMDIHGPKPNGYTHVLFI 491

Query: 403 HSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLS 462
           + YG++    +A+  ++ M+  G  PD V    ++   AK+G L +A  ++ +++A G+S
Sbjct: 492 NYYGKSGESIKAIQRYELMKSKGIVPDVVAGNAVLFGLAKSGRLGMAKRVFHELKAMGVS 551

Query: 463 PDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKL 522
           PDT TY+++I C  KA     A ++F +M+   C+P+++  N +I    KA     A ++
Sbjct: 552 PDTITYTMMIKCCSKASKFDEAVKIFYDMIENNCVPDVLVVNSLIDTLYKAGRGDEAWQI 611

Query: 523 YRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGK 582
           +  ++    EP   TY+ ++  LG  G + E   +  EM   N+ P+   Y  ++D   K
Sbjct: 612 FYQLKEMNLEPTDGTYNTLLAGLGREGKVKEVMHLLEEMYHSNYPPNLITYNTILDCLCK 671

Query: 583 AGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQT 642
            G V  A +   +M   G  P++ + N+++   ++  + ++A+ +   M  + L P   T
Sbjct: 672 NGAVNDALDMLYSMTTKGCIPDLSSYNTVIYGLVKEERYNEAFSIFCQMKKV-LIPDYAT 730

Query: 643 YTLLL 647
              +L
Sbjct: 731 LCTIL 735



 Score =  106 bits (264), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 105/464 (22%), Positives = 183/464 (39%), Gaps = 92/464 (19%)

Query: 362  TYTTMVGILGRARQFGAINKLLDQ---MVRDGCQPNVVTYNRLIHSYGRANYLNEALDVF 418
            TY T++  L +    GA+N  LD    M   GC P++ +YN +I+   +    NEA  +F
Sbjct: 661  TYNTILDCLCKN---GAVNDALDMLYSMTTKGCIPDLSSYNTVIYGLVKEERYNEAFSIF 717

Query: 419  KQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKK----------------------- 455
             QM+ V   PD  T CT++    K G +  A+ + K+                       
Sbjct: 718  CQMKKV-LIPDYATLCTILPSFVKIGLMKEALHIIKEYFLQPGSKTDRSSCHSLMEGILK 776

Query: 456  -------------MQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVT 502
                         + ++G++ D F    +I  L K      AH+L  +  + G      +
Sbjct: 777  KAGTEKSIEFAEIIASSGITLDDFFLCPLIKHLCKQKKALEAHELVKKFKSFGVSLKTGS 836

Query: 503  YNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMR 562
            YN +I           A  L+ +M+  G  PD+ TY+++++ +G    ++E   V  EM 
Sbjct: 837  YNSLICGLVDENLIDIAEGLFAEMKELGCGPDEFTYNLLLDAMGKSMRIEEMLKVQEEMH 896

Query: 563  RKNW-----------------------------------VPDEPVYGLLVDLWGKAGNVR 587
            RK +                                    P    YG L+D   KAG + 
Sbjct: 897  RKGYESTYVTYNTIISGLVKSRRLEQAIDLYYNLMSQGFSPTPCTYGPLLDGLLKAGRIE 956

Query: 588  KAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
             A   +  ML+ G + N    N LL+     G      HL Q M++ G+ P +++YT+++
Sbjct: 957  DAENLFNEMLEYGCKANCTIYNILLNGHRIAGNTEKVCHLFQDMVDQGINPDIKSYTIII 1016

Query: 648  SCCTEARSPYD-MGFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDR 706
                +A    D + +  +L+ +   P  +    +       + + + V  F EM      
Sbjct: 1017 DTLCKAGQLNDGLTYFRQLLEMGLEPDLITYNLLIDGLGKSKRLEEAVSLFNEM------ 1070

Query: 707  ESKRGLV------DAVVDFLHKSGLKEEAGSVWEVAAQKNVYPD 744
              K+G+V      ++++  L K+G   EAG ++E    K   P+
Sbjct: 1071 -QKKGIVPNLYTYNSLILHLGKAGKAAEAGKMYEELLTKGWKPN 1113


>gi|357130032|ref|XP_003566662.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
           distachyon]
          Length = 859

 Score =  157 bits (396), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 130/488 (26%), Positives = 235/488 (48%), Gaps = 22/488 (4%)

Query: 271 FSKPSREMKIPAGLAPFSRHFASTGNVVESVSRILRQWKWGPLAEEALGNTNYSMDAYQA 330
           F++  RE   P  +AP S H  + G +++   R  R+   GP     L          +A
Sbjct: 139 FNRICREEAGPR-VAPLSVH--TYGILMDCCCRA-RRPDLGPAFFARLLRAGLRTRTIEA 194

Query: 331 NQVLKQL-----QDHTVALGFFNWLRRQA--GFKHDEHTYTTMV-GILGRARQFGAINKL 382
           N  LK L      D  V +     L R +  G   +  +Y T++  + G +R   A++ +
Sbjct: 195 NTFLKCLCHAKRTDEAVDV----LLHRMSDLGCVPNAISYNTVIKSLCGDSRSQEALD-M 249

Query: 383 LDQMVRDG--CQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIH 440
           + +M ++G  C P+VV++N +IH + +   +++A ++  +M   G EPD VTY +++D  
Sbjct: 250 VQRMAKEGGRCSPDVVSFNTVIHGFFKQGEVSKACNLINEMVQKGVEPDVVTYNSIVDAL 309

Query: 441 AKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNL 500
            KA  +D A  + ++M   G+ PD  TY+ II+    +GH + + ++F +M ++G IP +
Sbjct: 310 CKARAMDKAELVLRQMVDKGVEPDGLTYTAIIHGYSCSGHWKESAKMFRKMTSKGLIPGI 369

Query: 501 VTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAE 560
           VT+N  ++   K    + A ++++ M   G  PD V+YSI++      G   +   +F  
Sbjct: 370 VTFNSFMSSLCKHGRSKDAEEIFQYMTTKGHMPDLVSYSILLHGYATEGRFADMNNLFHS 429

Query: 561 MRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQ 620
           M  K  V +   + +L+    K G + +A   +  M   G+RP+V T ++L+SAF R+G+
Sbjct: 430 MADKGIVANCHCFNILISAHAKRGMMDEAMLVFTEMQGQGVRPDVVTYSTLISAFCRMGR 489

Query: 621 LSDAYHLLQGMLNLGLKPSLQTY-TLLLSCCTEARSPYDMGFCHELMAVS-GHPAHMFLL 678
           L+DA      M+++GL+P+   Y +L+   C             E+M+     P  +F  
Sbjct: 490 LADAMEKFSQMISIGLEPNTVVYHSLIHGFCMHGDLVKAKELVSEMMSKGIPRPNIVFFS 549

Query: 679 SMPSPGPDGQNVRDHVGSFLEMMHSEDRESKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQ 738
           S+     +   V D    F  ++H  DR +     ++++D     G  E+A  V +    
Sbjct: 550 SIIHSLCNEGRVMDAHDVFNLVIHIGDRPTIVTF-NSLIDGYCLVGKMEKAFGVLDAMVS 608

Query: 739 KNVYPDAV 746
             + PD V
Sbjct: 609 VGIEPDVV 616



 Score =  146 bits (368), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 93/354 (26%), Positives = 173/354 (48%), Gaps = 2/354 (0%)

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
           Q G + D  TY ++V  L +AR       +L QMV  G +P+ +TY  +IH Y  + +  
Sbjct: 292 QKGVEPDVVTYNSIVDALCKARAMDKAELVLRQMVDKGVEPDGLTYTAIIHGYSCSGHWK 351

Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
           E+  +F++M   G  P  VT+ + +    K G    A ++++ M   G  PD  +YS+++
Sbjct: 352 ESAKMFRKMTSKGLIPGIVTFNSFMSSLCKHGRSKDAEEIFQYMTTKGHMPDLVSYSILL 411

Query: 473 NCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFE 532
           +     G     + LF  M ++G + N   +NI+I+  AK      A+ ++ +MQ  G  
Sbjct: 412 HGYATEGRFADMNNLFHSMADKGIVANCHCFNILISAHAKRGMMDEAMLVFTEMQGQGVR 471

Query: 533 PDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEW 592
           PD VTYS ++      G L +A   F++M      P+  VY  L+  +   G++ KA E 
Sbjct: 472 PDVVTYSTLISAFCRMGRLADAMEKFSQMISIGLEPNTVVYHSLIHGFCMHGDLVKAKEL 531

Query: 593 YEAMLQAGL-RPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTY-TLLLSCC 650
              M+  G+ RPN+   +S++ +    G++ DA+ +   ++++G +P++ T+ +L+   C
Sbjct: 532 VSEMMSKGIPRPNIVFFSSIIHSLCNEGRVMDAHDVFNLVIHIGDRPTIVTFNSLIDGYC 591

Query: 651 TEARSPYDMGFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSE 704
              +     G    +++V   P  +   ++ S       + D +  F EM+H +
Sbjct: 592 LVGKMEKAFGVLDAMVSVGIEPDVVTYNTLVSGYCKSGKIDDGLILFREMLHKK 645



 Score =  119 bits (299), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 82/305 (26%), Positives = 142/305 (46%), Gaps = 6/305 (1%)

Query: 346 FFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSY 405
            F ++  + G   D  +Y+ ++       +F  +N L   M   G   N   +N LI ++
Sbjct: 391 IFQYMTTK-GHMPDLVSYSILLHGYATEGRFADMNNLFHSMADKGIVANCHCFNILISAH 449

Query: 406 GRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDT 465
            +   ++EA+ VF +MQ  G  PD VTY TLI    + G L  AM+ + +M + GL P+T
Sbjct: 450 AKRGMMDEAMLVFTEMQGQGVRPDVVTYSTLISAFCRMGRLADAMEKFSQMISIGLEPNT 509

Query: 466 FTYSVIINCLGKAGHLQAAHQLFCEMVNQGCI-PNLVTYNIMIALQAKARNYQSALKLYR 524
             Y  +I+     G L  A +L  EM+++G   PN+V ++ +I           A  ++ 
Sbjct: 510 VVYHSLIHGFCMHGDLVKAKELVSEMMSKGIPRPNIVFFSSIIHSLCNEGRVMDAHDVFN 569

Query: 525 DMQNAGFEPDKVTYSIVMEVLGHC--GYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGK 582
            + + G  P  VT++ +++  G+C  G +++A  V   M      PD   Y  LV  + K
Sbjct: 570 LVIHIGDRPTIVTFNSLID--GYCLVGKMEKAFGVLDAMVSVGIEPDVVTYNTLVSGYCK 627

Query: 583 AGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQT 642
           +G +      +  ML   ++P   T + +L      G+ S A  +   M++ G    + T
Sbjct: 628 SGKIDDGLILFREMLHKKVKPTTVTYSIVLDGLFHAGRTSAAKKMFHEMIDSGTAVDIDT 687

Query: 643 YTLLL 647
           Y +LL
Sbjct: 688 YKILL 692



 Score =  117 bits (294), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 70/269 (26%), Positives = 133/269 (49%)

Query: 380 NKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDI 439
           + + + ++  G +P +VT+N LI  Y     + +A  V   M  VG EPD VTY TL+  
Sbjct: 565 HDVFNLVIHIGDRPTIVTFNSLIDGYCLVGKMEKAFGVLDAMVSVGIEPDVVTYNTLVSG 624

Query: 440 HAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPN 499
           + K+G +D  + ++++M    + P T TYS++++ L  AG   AA ++F EM++ G   +
Sbjct: 625 YCKSGKIDDGLILFREMLHKKVKPTTVTYSIVLDGLFHAGRTSAAKKMFHEMIDSGTAVD 684

Query: 500 LVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFA 559
           + TY I++    +      A+ L+  +     + D    + V+  L      +EA  +FA
Sbjct: 685 IDTYKILLKGLCRNDLTDEAITLFHKLGAMDCKFDITILNTVINALYKVRRREEANDLFA 744

Query: 560 EMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVG 619
            +     VP+   YG+++    K G+V +A   + +M ++G  P+    N ++   L+ G
Sbjct: 745 AISTSGLVPNVSTYGVMIHNLLKEGSVEEADTMFSSMEKSGCAPSSRLLNDIIRMLLQKG 804

Query: 620 QLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
            +  A + +  +    +     T +LL+S
Sbjct: 805 DIVKAGYYMSKVDGTIISLEASTTSLLMS 833



 Score =  113 bits (283), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 74/253 (29%), Positives = 123/253 (48%), Gaps = 5/253 (1%)

Query: 382 LLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHA 441
           +  +M   G +P+VVTY+ LI ++ R   L +A++ F QM  +G EP+ V Y +LI    
Sbjct: 461 VFTEMQGQGVRPDVVTYSTLISAFCRMGRLADAMEKFSQMISIGLEPNTVVYHSLIHGFC 520

Query: 442 KAGFLDVAMDMYKKMQAAGL-SPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNL 500
             G L  A ++  +M + G+  P+   +S II+ L   G +  AH +F  +++ G  P +
Sbjct: 521 MHGDLVKAKELVSEMMSKGIPRPNIVFFSSIIHSLCNEGRVMDAHDVFNLVIHIGDRPTI 580

Query: 501 VTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHC--GYLDEAEAVF 558
           VT+N +I         + A  +   M + G EPD VTY+ +  V G+C  G +D+   +F
Sbjct: 581 VTFNSLIDGYCLVGKMEKAFGVLDAMVSVGIEPDVVTYNTL--VSGYCKSGKIDDGLILF 638

Query: 559 AEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRV 618
            EM  K   P    Y +++D    AG    A + +  M+ +G   ++ T   LL    R 
Sbjct: 639 REMLHKKVKPTTVTYSIVLDGLFHAGRTSAAKKMFHEMIDSGTAVDIDTYKILLKGLCRN 698

Query: 619 GQLSDAYHLLQGM 631
               +A  L   +
Sbjct: 699 DLTDEAITLFHKL 711



 Score =  108 bits (270), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 70/261 (26%), Positives = 131/261 (50%), Gaps = 1/261 (0%)

Query: 380 NKLLDQMVRDGC-QPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLID 438
            +L+ +M+  G  +PN+V ++ +IHS      + +A DVF  +  +G  P  VT+ +LID
Sbjct: 529 KELVSEMMSKGIPRPNIVFFSSIIHSLCNEGRVMDAHDVFNLVIHIGDRPTIVTFNSLID 588

Query: 439 IHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIP 498
            +   G ++ A  +   M + G+ PD  TY+ +++   K+G +     LF EM+++   P
Sbjct: 589 GYCLVGKMEKAFGVLDAMVSVGIEPDVVTYNTLVSGYCKSGKIDDGLILFREMLHKKVKP 648

Query: 499 NLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVF 558
             VTY+I++     A    +A K++ +M ++G   D  TY I+++ L      DEA  +F
Sbjct: 649 TTVTYSIVLDGLFHAGRTSAAKKMFHEMIDSGTAVDIDTYKILLKGLCRNDLTDEAITLF 708

Query: 559 AEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRV 618
            ++   +   D  +   +++   K     +A + + A+  +GL PNV T   ++   L+ 
Sbjct: 709 HKLGAMDCKFDITILNTVINALYKVRRREEANDLFAAISTSGLVPNVSTYGVMIHNLLKE 768

Query: 619 GQLSDAYHLLQGMLNLGLKPS 639
           G + +A  +   M   G  PS
Sbjct: 769 GSVEEADTMFSSMEKSGCAPS 789



 Score = 96.7 bits (239), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 73/304 (24%), Positives = 140/304 (46%), Gaps = 17/304 (5%)

Query: 317 ALGNTNYSMDAYQANQVLKQLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQF 376
           +L N    MDA+    ++  + D    + F + +    G+         +VG + +A  F
Sbjct: 554 SLCNEGRVMDAHDVFNLVIHIGDRPTIVTFNSLID---GY--------CLVGKMEKA--F 600

Query: 377 GAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTL 436
           G    +LD MV  G +P+VVTYN L+  Y ++  +++ L +F++M     +P  VTY  +
Sbjct: 601 G----VLDAMVSVGIEPDVVTYNTLVSGYCKSGKIDDGLILFREMLHKKVKPTTVTYSIV 656

Query: 437 IDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGC 496
           +D    AG    A  M+ +M  +G + D  TY +++  L +      A  LF ++    C
Sbjct: 657 LDGLFHAGRTSAAKKMFHEMIDSGTAVDIDTYKILLKGLCRNDLTDEAITLFHKLGAMDC 716

Query: 497 IPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEA 556
             ++   N +I    K R  + A  L+  +  +G  P+  TY +++  L   G ++EA+ 
Sbjct: 717 KFDITILNTVINALYKVRRREEANDLFAAISTSGLVPNVSTYGVMIHNLLKEGSVEEADT 776

Query: 557 VFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFL 616
           +F+ M +    P   +   ++ +  + G++ KA  +   +    +     T + L+S F 
Sbjct: 777 MFSSMEKSGCAPSSRLLNDIIRMLLQKGDIVKAGYYMSKVDGTIISLEASTTSLLMSLFS 836

Query: 617 RVGQ 620
             G+
Sbjct: 837 SKGK 840


>gi|15221674|ref|NP_176496.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75169918|sp|Q9CAN5.1|PPR98_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g63080, mitochondrial; Flags: Precursor
 gi|12323262|gb|AAG51614.1|AC010795_18 unknown protein; 41955-40111 [Arabidopsis thaliana]
 gi|332195930|gb|AEE34051.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 614

 Score =  157 bits (396), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 116/403 (28%), Positives = 197/403 (48%), Gaps = 20/403 (4%)

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
           + G++ D  T+TT+V  L +  +      L+++MV  GCQP++VTY  +I+   +    +
Sbjct: 163 EMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPD 222

Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
            AL++  +M+    E D V Y T+ID   K   +D A++++ +M   G+ PD FTYS +I
Sbjct: 223 LALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLI 282

Query: 473 NCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFE 532
           +CL   G    A +L  +M+ +   PN+VT+N +I   AK      A KL+ +M     +
Sbjct: 283 SCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSID 342

Query: 533 PDKVTYSIVMEVLGHCGY--LDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAW 590
           P+ VTY+ ++   G C +  LDEA+ +F  M  K+ +PD   Y  L++ + KA  V    
Sbjct: 343 PNIVTYNSLIN--GFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGM 400

Query: 591 EWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTY-TLLLSC 649
           E +  M + GL  N  T  +L+  F +     +A  + + M++ G+ P++ TY TLL   
Sbjct: 401 ELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGL 460

Query: 650 CTEARSPYDMGFCHELMAVSGHPAHMFLLSMPSPGP-DGQNVRDHVGSFLEMMHSEDRES 708
           C   +    M    E +  S     ++  ++ S G      V D    F  +       S
Sbjct: 461 CKNGKLEKAM-VVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSL-------S 512

Query: 709 KRGLVDAVVDF------LHKSGLKEEAGSVWEVAAQKNVYPDA 745
            +G+   V+ +        K GLKEEA +++    +    PD+
Sbjct: 513 LKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDS 555



 Score =  149 bits (375), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 110/413 (26%), Positives = 192/413 (46%), Gaps = 6/413 (1%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           G  H+ +TY  M+  L R  Q      +L +M++ G  P++VT N L++ +   N ++EA
Sbjct: 95  GVSHNLYTYNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEA 154

Query: 415 LDVFKQMQVVGCEPDRVTYCTLID---IHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
           + +  QM  +G +PD VT+ TL+     H KA     A+ + ++M   G  PD  TY  +
Sbjct: 155 VALVDQMVEMGYQPDTVTFTTLVHGLFQHNKAS---EAVALVERMVVKGCQPDLVTYGAV 211

Query: 472 INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF 531
           IN L K G    A  L  +M       ++V Y+ +I    K R+   AL L+ +M N G 
Sbjct: 212 INGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGI 271

Query: 532 EPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWE 591
            PD  TYS ++  L + G   +A  + ++M  +   P+   +  L+D + K G + +A +
Sbjct: 272 RPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEK 331

Query: 592 WYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCT 651
            ++ M+Q  + PN+ T NSL++ F    +L +A  +   M++    P + TY  L++   
Sbjct: 332 LFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFC 391

Query: 652 EARSPYDMGFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRESKRG 711
           +A+   D       M+  G   +    +    G    +  D+     + M S+       
Sbjct: 392 KAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIM 451

Query: 712 LVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAVKEKGMSYWLINLHVMSDG 764
             + ++D L K+G  E+A  V+E   +  + PD      MS  +     + DG
Sbjct: 452 TYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDG 504



 Score =  142 bits (357), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 88/305 (28%), Positives = 155/305 (50%), Gaps = 1/305 (0%)

Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLI 402
           AL  F  +  + G + D  TY++++  L    ++   ++LL  M+     PNVVT+N LI
Sbjct: 259 ALNLFTEMDNK-GIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLI 317

Query: 403 HSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLS 462
            ++ +   L EA  +F +M     +P+ VTY +LI+       LD A  ++  M +    
Sbjct: 318 DAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCL 377

Query: 463 PDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKL 522
           PD  TY+ +IN   KA  +    +LF +M  +G + N VTY  +I    +A +  +A  +
Sbjct: 378 PDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMV 437

Query: 523 YRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGK 582
           ++ M + G  P+ +TY+ +++ L   G L++A  VF  +++    PD   Y ++ +   K
Sbjct: 438 FKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCK 497

Query: 583 AGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQT 642
           AG V   W+ + ++   G++P+V   N+++S F + G   +AY L   M   G  P   T
Sbjct: 498 AGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGT 557

Query: 643 YTLLL 647
           Y  L+
Sbjct: 558 YNTLI 562



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 87/304 (28%), Positives = 151/304 (49%), Gaps = 2/304 (0%)

Query: 362 TYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQM 421
           T+ +++    +  +     KL D+M++    PN+VTYN LI+ +   + L+EA  +F  M
Sbjct: 312 TFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLM 371

Query: 422 QVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHL 481
               C PD VTY TLI+   KA  +   M++++ M   GL  +T TY+ +I+   +A   
Sbjct: 372 VSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDC 431

Query: 482 QAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIV 541
             A  +F +MV+ G  PN++TYN ++    K    + A+ ++  +Q +  EPD  TY+I+
Sbjct: 432 DNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIM 491

Query: 542 MEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGL 601
            E +   G +++   +F  +  K   PD   Y  ++  + K G   +A+  +  M + G 
Sbjct: 492 SEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGP 551

Query: 602 RPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGF 661
            P+  T N+L+ A LR G  + +  L++ M +        TY L+     + R   D GF
Sbjct: 552 LPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTYGLVTDMLHDGR--LDKGF 609

Query: 662 CHEL 665
              L
Sbjct: 610 LEVL 613



 Score =  136 bits (343), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 94/347 (27%), Positives = 161/347 (46%), Gaps = 21/347 (6%)

Query: 342 VALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRL 401
           +AL   N + +    + D   Y+T++  L + R       L  +M   G +P+V TY+ L
Sbjct: 223 LALNLLNKMEK-GKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSL 281

Query: 402 IH---SYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQA 458
           I    +YGR    ++A  +   M      P+ VT+ +LID  AK G L  A  ++ +M  
Sbjct: 282 ISCLCNYGR---WSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQ 338

Query: 459 AGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQS 518
             + P+  TY+ +IN       L  A Q+F  MV++ C+P++VTYN +I    KA+    
Sbjct: 339 RSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVD 398

Query: 519 ALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVD 578
            ++L+RDM   G   + VTY+ ++         D A+ VF +M      P+   Y  L+D
Sbjct: 399 GMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLD 458

Query: 579 LWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKP 638
              K G + KA   +E + ++ + P++ T N +     + G++ D + L   +   G+KP
Sbjct: 459 GLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKP 518

Query: 639 SLQTYTLLLSCCTEARSPYDMGFCHELMAVSGHPAHMFLLSMPSPGP 685
            +  Y  ++S           GFC + +      A+   + M   GP
Sbjct: 519 DVIAYNTMIS-----------GFCKKGLK---EEAYTLFIKMKEDGP 551



 Score =  122 bits (307), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 82/286 (28%), Positives = 137/286 (47%)

Query: 363 YTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQ 422
           ++ ++  + + ++F  +    ++M   G   N+ TYN +I+   R + L+ AL +  +M 
Sbjct: 68  FSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNIMINCLCRRSQLSFALAILGKMM 127

Query: 423 VVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQ 482
            +G  P  VT  +L++       +  A+ +  +M   G  PDT T++ +++ L +     
Sbjct: 128 KLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKAS 187

Query: 483 AAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVM 542
            A  L   MV +GC P+LVTY  +I    K      AL L   M+    E D V YS V+
Sbjct: 188 EAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVI 247

Query: 543 EVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLR 602
           + L    ++D+A  +F EM  K   PD   Y  L+      G    A      ML+  + 
Sbjct: 248 DSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKIN 307

Query: 603 PNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
           PNV T NSL+ AF + G+L +A  L   M+   + P++ TY  L++
Sbjct: 308 PNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLIN 353



 Score =  114 bits (284), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 70/221 (31%), Positives = 114/221 (51%)

Query: 359 DEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVF 418
           D  TY T++    +A++     +L   M R G   N VTY  LIH + +A+  + A  VF
Sbjct: 379 DVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVF 438

Query: 419 KQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKA 478
           KQM   G  P+ +TY TL+D   K G L+ AM +++ +Q + + PD +TY+++   + KA
Sbjct: 439 KQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKA 498

Query: 479 GHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTY 538
           G ++    LFC +  +G  P+++ YN MI+   K    + A  L+  M+  G  PD  TY
Sbjct: 499 GKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTY 558

Query: 539 SIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDL 579
           + ++      G    +  +  EMR   +  D   YGL+ D+
Sbjct: 559 NTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTYGLVTDM 599



 Score =  102 bits (254), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 67/245 (27%), Positives = 118/245 (48%), Gaps = 1/245 (0%)

Query: 411 LNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSV 470
           L+EA+D+F +M      P  V +  L+   AK    D+ +   +KM+  G+S + +TY++
Sbjct: 46  LDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNI 105

Query: 471 IINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAG 530
           +INCL +   L  A  +  +M+  G  P++VT N ++           A+ L   M   G
Sbjct: 106 MINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMG 165

Query: 531 FEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAW 590
           ++PD VT++ ++  L       EA A+   M  K   PD   YG +++   K G    A 
Sbjct: 166 YQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLAL 225

Query: 591 EWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSC- 649
                M +  +  +V   ++++ +  +   + DA +L   M N G++P + TY+ L+SC 
Sbjct: 226 NLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCL 285

Query: 650 CTEAR 654
           C   R
Sbjct: 286 CNYGR 290



 Score = 99.8 bits (247), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 68/266 (25%), Positives = 122/266 (45%)

Query: 382 LLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHA 441
           L  +MV+    P++V +++L+ +  +    +  +   ++M+++G   +  TY  +I+   
Sbjct: 52  LFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNIMINCLC 111

Query: 442 KAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLV 501
           +   L  A+ +  KM   G  P   T + ++N       +  A  L  +MV  G  P+ V
Sbjct: 112 RRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTV 171

Query: 502 TYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEM 561
           T+  ++    +      A+ L   M   G +PD VTY  V+  L   G  D A  +  +M
Sbjct: 172 TFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKM 231

Query: 562 RRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQL 621
            +     D  +Y  ++D   K  +V  A   +  M   G+RP+V T +SL+S     G+ 
Sbjct: 232 EKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRW 291

Query: 622 SDAYHLLQGMLNLGLKPSLQTYTLLL 647
           SDA  LL  ML   + P++ T+  L+
Sbjct: 292 SDASRLLSDMLERKINPNVVTFNSLI 317


>gi|125558723|gb|EAZ04259.1| hypothetical protein OsI_26403 [Oryza sativa Indica Group]
          Length = 528

 Score =  156 bits (395), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 93/318 (29%), Positives = 152/318 (47%)

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
           Q G   DE TY+ +V    RA ++ +   LL +M  DG +P+   ++R++  +       
Sbjct: 187 QCGVAPDEATYSLLVDAYTRAGRWESARILLKEMEADGVKPSSYVFSRILAGFRDRGEWQ 246

Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
           +A  V ++M   G  PDR  Y  +ID   K   L  AMD + +M+  G+ PD  T++ +I
Sbjct: 247 KAFAVLREMHASGVRPDRHFYNVMIDTFGKYNCLGHAMDAFDRMREEGIEPDVVTWNTLI 306

Query: 473 NCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFE 532
           +   K G    A +LF EM    C     TYNIMI L  + + ++    +  +M+  G  
Sbjct: 307 DAHCKGGRHDRAIELFDEMRESNCPLGTTTYNIMINLLGEEQRWEGVEAMLAEMKEQGLV 366

Query: 533 PDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEW 592
           P+ +TY+ +++V G  G   EA      M+     P   +Y  LV+ + + G    A   
Sbjct: 367 PNIITYTTLVDVYGRSGRFKEAVDCIEAMKADGLKPSSTMYHALVNAYAQRGLADHALNV 426

Query: 593 YEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTE 652
            +AM   GL  +    NSL++AF    ++++A+ +LQ M   GL+P + TYT L+     
Sbjct: 427 VKAMRADGLEASTVVLNSLINAFGEDRRIAEAFSVLQFMKENGLRPDVITYTTLMKALIR 486

Query: 653 ARSPYDMGFCHELMAVSG 670
                 +   +E M  SG
Sbjct: 487 VEQFEKVPVIYEEMITSG 504



 Score =  112 bits (280), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 100/462 (21%), Positives = 189/462 (40%), Gaps = 24/462 (5%)

Query: 359 DEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVF 418
           D   ++ ++    RAR   A  +LL      G  P       LI S G A  + EA  +F
Sbjct: 87  DAPLFSDLISAFARARLPDAALELLASAQAIGLTPRSNAVTALISSLGSARRVAEAEALF 146

Query: 419 KQMQVVG-CEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGK 477
            +  + G  +P    Y  L+  + K G L  A  +  +M   G++PD  TYS++++   +
Sbjct: 147 LEFFLAGEIKPRTRAYNALLKGYVKIGSLKNAEQVLDEMSQCGVAPDEATYSLLVDAYTR 206

Query: 478 AGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVT 537
           AG  ++A  L  EM   G  P+   ++ ++A       +Q A  + R+M  +G  PD+  
Sbjct: 207 AGRWESARILLKEMEADGVKPSSYVFSRILAGFRDRGEWQKAFAVLREMHASGVRPDRHF 266

Query: 538 YSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAML 597
           Y+++++  G    L  A   F  MR +   PD   +  L+D   K G   +A E ++ M 
Sbjct: 267 YNVMIDTFGKYNCLGHAMDAFDRMREEGIEPDVVTWNTLIDAHCKGGRHDRAIELFDEMR 326

Query: 598 QAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPY 657
           ++       T N +++      +      +L  M   GL P++ TYT L+     +    
Sbjct: 327 ESNCPLGTTTYNIMINLLGEEQRWEGVEAMLAEMKEQGLVPNIITYTTLVDVYGRSGRFK 386

Query: 658 DMGFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRESKRGLVDAVV 717
           +   C E M   G      +          + + DH  + ++ M ++  E+   ++++++
Sbjct: 387 EAVDCIEAMKADGLKPSSTMYHALVNAYAQRGLADHALNVVKAMRADGLEASTVVLNSLI 446

Query: 718 DFLHKSGLKEEAGSVWEVAAQKNVYPDAVKEKGMSYWLINLHVMSDGTAVIALSRTLAWF 777
           +   +     EA SV +   +  + PD +    +   LI +        +          
Sbjct: 447 NAFGEDRRIAEAFSVLQFMKENGLRPDVITYTTLMKALIRVEQFEKVPVIY--------- 497

Query: 778 RKQMLISGVGPSRIDIVTGWGRRSRVTGTSLVRQAVQELLHM 819
            ++M+ SG  P R                +++R A++ + HM
Sbjct: 498 -EEMITSGCAPDR-------------KARAMLRSALRYMKHM 525



 Score =  104 bits (259), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 86/381 (22%), Positives = 163/381 (42%), Gaps = 18/381 (4%)

Query: 237 VQPRSKAHSNRLNSNFKSNLQPSDAKVVECVSERFSKPSREMKIPAGLAPFSRHFASTGN 296
           ++PR++A+    N+  K  ++    K  E V +  S+         G+AP     A+   
Sbjct: 155 IKPRTRAY----NALLKGYVKIGSLKNAEQVLDEMSQ--------CGVAPDE---ATYSL 199

Query: 297 VVESVSRILRQWKWGPLAEEALGNTNYSMDAYQANQVLKQLQDHTVALGFFNWLRRQ--A 354
           +V++ +R  R W+   +  + +        +Y  +++L   +D       F  LR    +
Sbjct: 200 LVDAYTRAGR-WESARILLKEMEADGVKPSSYVFSRILAGFRDRGEWQKAFAVLREMHAS 258

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           G + D H Y  M+   G+    G      D+M  +G +P+VVT+N LI ++ +    + A
Sbjct: 259 GVRPDRHFYNVMIDTFGKYNCLGHAMDAFDRMREEGIEPDVVTWNTLIDAHCKGGRHDRA 318

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
           +++F +M+   C     TY  +I++  +    +    M  +M+  GL P+  TY+ +++ 
Sbjct: 319 IELFDEMRESNCPLGTTTYNIMINLLGEEQRWEGVEAMLAEMKEQGLVPNIITYTTLVDV 378

Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPD 534
            G++G  + A      M   G  P+   Y+ ++   A+      AL + + M+  G E  
Sbjct: 379 YGRSGRFKEAVDCIEAMKADGLKPSSTMYHALVNAYAQRGLADHALNVVKAMRADGLEAS 438

Query: 535 KVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYE 594
            V  + ++   G    + EA +V   M+     PD   Y  L+    +     K    YE
Sbjct: 439 TVVLNSLINAFGEDRRIAEAFSVLQFMKENGLRPDVITYTTLMKALIRVEQFEKVPVIYE 498

Query: 595 AMLQAGLRPNVPTCNSLLSAF 615
            M+ +G  P+      L SA 
Sbjct: 499 EMITSGCAPDRKARAMLRSAL 519



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 37/168 (22%), Positives = 71/168 (42%), Gaps = 35/168 (20%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           ++ G   +  TYTT+V + GR+ +F      ++ M  DG +P+   Y+ L+++Y +    
Sbjct: 361 KEQGLVPNIITYTTLVDVYGRSGRFKEAVDCIEAMKADGLKPSSTMYHALVNAYAQRGLA 420

Query: 412 NEALDVFKQMQVVGCE-----------------------------------PDRVTYCTL 436
           + AL+V K M+  G E                                   PD +TY TL
Sbjct: 421 DHALNVVKAMRADGLEASTVVLNSLINAFGEDRRIAEAFSVLQFMKENGLRPDVITYTTL 480

Query: 437 IDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAA 484
           +    +    +    +Y++M  +G +PD    +++ + L    H++ A
Sbjct: 481 MKALIRVEQFEKVPVIYEEMITSGCAPDRKARAMLRSALRYMKHMRVA 528


>gi|18424537|ref|NP_568948.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75170898|sp|Q9FIT7.1|PP442_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g61990, mitochondrial; Flags: Precursor
 gi|10176917|dbj|BAB10161.1| unnamed protein product [Arabidopsis thaliana]
 gi|332010163|gb|AED97546.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 974

 Score =  156 bits (395), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 99/288 (34%), Positives = 148/288 (51%), Gaps = 2/288 (0%)

Query: 361 HTYTTMV-GILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFK 419
           +TY T+V G+       GA N ++ +M+  GC+PNVV Y  LI ++ + +   +A+ V K
Sbjct: 418 YTYGTVVKGMCSSGDLDGAYN-IVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLK 476

Query: 420 QMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAG 479
           +M+  G  PD   Y +LI   +KA  +D A     +M   GL P+ FTY   I+   +A 
Sbjct: 477 EMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEAS 536

Query: 480 HLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYS 539
              +A +   EM   G +PN V    +I    K      A   YR M + G   D  TY+
Sbjct: 537 EFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYT 596

Query: 540 IVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQA 599
           ++M  L     +D+AE +F EMR K   PD   YG+L++ + K GN++KA   ++ M++ 
Sbjct: 597 VLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEE 656

Query: 600 GLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
           GL PNV   N LL  F R G++  A  LL  M   GL P+  TY  ++
Sbjct: 657 GLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTII 704



 Score =  139 bits (350), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 91/340 (26%), Positives = 156/340 (45%), Gaps = 43/340 (12%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           R  G   D  +Y  ++    +       + + D+MV +G  PNV+ YN L+  + R+  +
Sbjct: 619 RGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEI 678

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
            +A ++  +M V G  P+ VTYCT+ID + K+G L  A  ++ +M+  GL PD+F Y+ +
Sbjct: 679 EKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTL 738

Query: 472 INCLGKAGHLQAAHQLF------------------------------CEMVNQ---GCI- 497
           ++   +   ++ A  +F                               E++N+   G   
Sbjct: 739 VDGCCRLNDVERAITIFGTNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFD 798

Query: 498 ----PNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDE 553
               PN VTYNIMI    K  N ++A +L+  MQNA   P  +TY+ ++      G   E
Sbjct: 799 RFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAE 858

Query: 554 AEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQA-----GLRPNVPTC 608
              VF E       PD  +Y ++++ + K G   KA    + M        G + ++ TC
Sbjct: 859 MFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTC 918

Query: 609 NSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
            +LLS F +VG++  A  +++ M+ L   P   T   L++
Sbjct: 919 RALLSGFAKVGEMEVAEKVMENMVRLQYIPDSATVIELIN 958



 Score =  135 bits (341), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 94/374 (25%), Positives = 175/374 (46%), Gaps = 7/374 (1%)

Query: 280 IPAGLAPFSRHFASTGNVVESVSRILRQWKWGPLAEEALGNTNYSMDAYQANQVLKQLQD 339
           I +GL P ++ +AS   ++E   R  +  + G      +   N  +  Y    V+K +  
Sbjct: 374 IASGLIPQAQAYAS---LIEGYCR-EKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCS 429

Query: 340 HTVALGFFNWLRRQ--AGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVT 397
                G +N ++    +G + +   YTT++    +  +FG   ++L +M   G  P++  
Sbjct: 430 SGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFC 489

Query: 398 YNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQ 457
           YN LI    +A  ++EA     +M   G +P+  TY   I  + +A     A    K+M+
Sbjct: 490 YNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMR 549

Query: 458 AAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQ 517
             G+ P+    + +IN   K G +  A   +  MV+QG + +  TY +++    K     
Sbjct: 550 ECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVD 609

Query: 518 SALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLV 577
            A +++R+M+  G  PD  +Y +++      G + +A ++F EM  +   P+  +Y +L+
Sbjct: 610 DAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLL 669

Query: 578 DLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLK 637
             + ++G + KA E  + M   GL PN  T  +++  + + G L++A+ L   M   GL 
Sbjct: 670 GGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLV 729

Query: 638 PSLQTYTLLLS-CC 650
           P    YT L+  CC
Sbjct: 730 PDSFVYTTLVDGCC 743



 Score =  135 bits (340), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 95/336 (28%), Positives = 154/336 (45%), Gaps = 42/336 (12%)

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
           + G K +  TY   +     A +F + +K + +M   G  PN V    LI+ Y +   + 
Sbjct: 515 ENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVI 574

Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
           EA   ++ M   G   D  TY  L++   K   +D A +++++M+  G++PD F+Y V+I
Sbjct: 575 EACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLI 634

Query: 473 NCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFE 532
           N   K G++Q A  +F EMV +G  PN++ YN+++    ++   + A +L  +M   G  
Sbjct: 635 NGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLH 694

Query: 533 PDKVTYSIVMEVLGHC--GYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKA- 589
           P+ VTY  +++  G+C  G L EA  +F EM+ K  VPD  VY  LVD   +  +V +A 
Sbjct: 695 PNAVTYCTIID--GYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAI 752

Query: 590 ----------------------W-----------EWYEAMLQAGL----RPNVPTCNSLL 612
                                 W           E    ++        +PN  T N ++
Sbjct: 753 TIFGTNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMI 812

Query: 613 SAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
               + G L  A  L   M N  L P++ TYT LL+
Sbjct: 813 DYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLN 848



 Score =  116 bits (290), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 89/413 (21%), Positives = 177/413 (42%), Gaps = 4/413 (0%)

Query: 334 LKQLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQP 393
           +K+L+D    L   + L    G   D HTY+ ++  L + R   A   L+ +MV  G   
Sbjct: 290 IKRLEDAKSLLVEMDSL----GVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMVSHGINI 345

Query: 394 NVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMY 453
               Y+  I    +   + +A  +F  M   G  P    Y +LI+ + +   +    ++ 
Sbjct: 346 KPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELL 405

Query: 454 KKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKA 513
            +M+   +    +TY  ++  +  +G L  A+ +  EM+  GC PN+V Y  +I    + 
Sbjct: 406 VEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQN 465

Query: 514 RNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVY 573
             +  A+++ ++M+  G  PD   Y+ ++  L     +DEA +   EM      P+   Y
Sbjct: 466 SRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTY 525

Query: 574 GLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLN 633
           G  +  + +A     A ++ + M + G+ PN   C  L++ + + G++ +A    + M++
Sbjct: 526 GAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVD 585

Query: 634 LGLKPSLQTYTLLLSCCTEARSPYDMGFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDH 693
            G+    +TYT+L++   +     D       M   G    +F   +   G         
Sbjct: 586 QGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQK 645

Query: 694 VGSFLEMMHSEDRESKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAV 746
             S  + M  E       + + ++    +SG  E+A  + +  + K ++P+AV
Sbjct: 646 ASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAV 698



 Score = 94.7 bits (234), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 71/273 (26%), Positives = 118/273 (43%)

Query: 381 KLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIH 440
           KL + M+  G  P   TY+ LI    +   L +A  +  +M  +G   D  TY  LID  
Sbjct: 263 KLKESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGL 322

Query: 441 AKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNL 500
            K    D A  +  +M + G++   + Y   I  + K G ++ A  LF  M+  G IP  
Sbjct: 323 LKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQA 382

Query: 501 VTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAE 560
             Y  +I    + +N +   +L  +M+         TY  V++ +   G LD A  +  E
Sbjct: 383 QAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKE 442

Query: 561 MRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQ 620
           M      P+  +Y  L+  + +      A    + M + G+ P++   NSL+    +  +
Sbjct: 443 MIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKR 502

Query: 621 LSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEA 653
           + +A   L  M+  GLKP+  TY   +S   EA
Sbjct: 503 MDEARSFLVEMVENGLKPNAFTYGAFISGYIEA 535



 Score = 88.2 bits (217), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 70/268 (26%), Positives = 120/268 (44%), Gaps = 21/268 (7%)

Query: 401 LIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFL-------------- 446
           L+ +  R N L+   DV+K M       D  TY  LI  H +AG +              
Sbjct: 192 LLDALLRWNRLDLFWDVYKGMVERNVVFDVKTYHMLIIAHCRAGNVQLGKDVLFKTEKEF 251

Query: 447 -------DVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPN 499
                  D A+ + + M   GL P  +TY V+I+ L K   L+ A  L  EM + G   +
Sbjct: 252 RTATLNVDGALKLKESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLD 311

Query: 500 LVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFA 559
             TY+++I    K RN  +A  L  +M + G       Y   + V+   G +++A+A+F 
Sbjct: 312 NHTYSLLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFD 371

Query: 560 EMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVG 619
            M     +P    Y  L++ + +  NVR+ +E    M +  +  +  T  +++      G
Sbjct: 372 GMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSG 431

Query: 620 QLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
            L  AY++++ M+  G +P++  YT L+
Sbjct: 432 DLDGAYNIVKEMIASGCRPNVVIYTTLI 459


>gi|359479583|ref|XP_002275680.2| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Vitis vinifera]
 gi|297735515|emb|CBI17955.3| unnamed protein product [Vitis vinifera]
          Length = 627

 Score =  156 bits (395), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 101/307 (32%), Positives = 159/307 (51%), Gaps = 12/307 (3%)

Query: 349 WLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRA 408
            LRR  G   +  T+T++V  L    +      LL +MVR G +PNVVTY  L++     
Sbjct: 153 MLRR--GHSPNTVTFTSLVKGLCLGSRISEATGLLRKMVRMGYRPNVVTYGTLLNGLCMT 210

Query: 409 NYLNEALDVFKQMQV------VGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLS 462
                A+ + ++M        V  +P+ V YCT+ID   K G +D   +++ +M+  G+S
Sbjct: 211 GNTMLAVKLHEEMLNGNGGFGVTIKPNLVCYCTIIDSLCKDGLIDKGKELFLEMKGRGIS 270

Query: 463 PDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKL 522
           PD   YS II+ +   G  + A  LF EMV++G  PN+VT+N++I    KA   + A  L
Sbjct: 271 PDVVAYSSIIHGMCHTGRWEGAKGLFNEMVDEGVHPNVVTFNVLIDALCKAGKMEEANHL 330

Query: 523 YRDMQNAGFEPDKVTYSIVMEVLGHC--GYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLW 580
            + M   G  PD  TY+ +++  G C  G +D+A  +F  M  K    D   Y +L++ +
Sbjct: 331 LKLMIQRGESPDTFTYNTLID--GFCLEGRIDDARDLFVSMESKGIETDAVSYNVLINGY 388

Query: 581 GKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSL 640
            K+G + +A + Y  M+   + P V T N+LL+   R G++ DA++L   M    L P  
Sbjct: 389 CKSGRMVEAKKLYREMMCKEIMPTVITYNTLLTGLFREGKVRDAWNLFGEMKVHDLTPES 448

Query: 641 QTYTLLL 647
            TY +LL
Sbjct: 449 CTYNILL 455



 Score =  151 bits (381), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 91/294 (30%), Positives = 152/294 (51%), Gaps = 2/294 (0%)

Query: 355 GFKHDEHTYTTMV-GILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNE 413
           G   D   Y++++ G+    R  GA   L ++MV +G  PNVVT+N LI +  +A  + E
Sbjct: 268 GISPDVVAYSSIIHGMCHTGRWEGA-KGLFNEMVDEGVHPNVVTFNVLIDALCKAGKMEE 326

Query: 414 ALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIIN 473
           A  + K M   G  PD  TY TLID     G +D A D++  M++ G+  D  +Y+V+IN
Sbjct: 327 ANHLLKLMIQRGESPDTFTYNTLIDGFCLEGRIDDARDLFVSMESKGIETDAVSYNVLIN 386

Query: 474 CLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEP 533
              K+G +  A +L+ EM+ +  +P ++TYN ++    +    + A  L+ +M+     P
Sbjct: 387 GYCKSGRMVEAKKLYREMMCKEIMPTVITYNTLLTGLFREGKVRDAWNLFGEMKVHDLTP 446

Query: 534 DKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWY 593
           +  TY+I+++ L    +L EA  +F  +   ++ P   ++  L+D   KA  +  A E +
Sbjct: 447 ESCTYNILLDGLCKNNHLSEAMELFHYLENHDFQPSIQIFNCLIDGLCKARKIEIARELF 506

Query: 594 EAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
             +   GL PNV T   ++    + GQL +A  L  GM   G  P+L T+  L+
Sbjct: 507 NRLSHEGLEPNVITYTVMIHGLCKSGQLENAKDLFLGMEEKGCAPNLVTFNTLM 560



 Score =  131 bits (329), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 81/285 (28%), Positives = 140/285 (49%)

Query: 363 YTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQ 422
           Y T++  L +        +L  +M   G  P+VV Y+ +IH          A  +F +M 
Sbjct: 241 YCTIIDSLCKDGLIDKGKELFLEMKGRGISPDVVAYSSIIHGMCHTGRWEGAKGLFNEMV 300

Query: 423 VVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQ 482
             G  P+ VT+  LID   KAG ++ A  + K M   G SPDTFTY+ +I+     G + 
Sbjct: 301 DEGVHPNVVTFNVLIDALCKAGKMEEANHLLKLMIQRGESPDTFTYNTLIDGFCLEGRID 360

Query: 483 AAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVM 542
            A  LF  M ++G   + V+YN++I    K+     A KLYR+M      P  +TY+ ++
Sbjct: 361 DARDLFVSMESKGIETDAVSYNVLINGYCKSGRMVEAKKLYREMMCKEIMPTVITYNTLL 420

Query: 543 EVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLR 602
             L   G + +A  +F EM+  +  P+   Y +L+D   K  ++ +A E +  +     +
Sbjct: 421 TGLFREGKVRDAWNLFGEMKVHDLTPESCTYNILLDGLCKNNHLSEAMELFHYLENHDFQ 480

Query: 603 PNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
           P++   N L+    +  ++  A  L   + + GL+P++ TYT+++
Sbjct: 481 PSIQIFNCLIDGLCKARKIEIARELFNRLSHEGLEPNVITYTVMI 525



 Score =  129 bits (325), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 78/305 (25%), Positives = 148/305 (48%), Gaps = 1/305 (0%)

Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLI 402
           A G FN +  + G   +  T+  ++  L +A +    N LL  M++ G  P+  TYN LI
Sbjct: 292 AKGLFNEMVDE-GVHPNVVTFNVLIDALCKAGKMEEANHLLKLMIQRGESPDTFTYNTLI 350

Query: 403 HSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLS 462
             +     +++A D+F  M+  G E D V+Y  LI+ + K+G +  A  +Y++M    + 
Sbjct: 351 DGFCLEGRIDDARDLFVSMESKGIETDAVSYNVLINGYCKSGRMVEAKKLYREMMCKEIM 410

Query: 463 PDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKL 522
           P   TY+ ++  L + G ++ A  LF EM      P   TYNI++    K  +   A++L
Sbjct: 411 PTVITYNTLLTGLFREGKVRDAWNLFGEMKVHDLTPESCTYNILLDGLCKNNHLSEAMEL 470

Query: 523 YRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGK 582
           +  ++N  F+P    ++ +++ L     ++ A  +F  +  +   P+   Y +++    K
Sbjct: 471 FHYLENHDFQPSIQIFNCLIDGLCKARKIEIARELFNRLSHEGLEPNVITYTVMIHGLCK 530

Query: 583 AGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQT 642
           +G +  A + +  M + G  PN+ T N+L+  F +  ++     LLQ M      P   T
Sbjct: 531 SGQLENAKDLFLGMEEKGCAPNLVTFNTLMRGFCQNDEMQKVVELLQEMAEKDFSPDAST 590

Query: 643 YTLLL 647
            ++++
Sbjct: 591 ISIVV 595



 Score =  126 bits (317), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 81/294 (27%), Positives = 141/294 (47%), Gaps = 11/294 (3%)

Query: 368 GILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCE 427
           G + R+  F   N L+D        P + ++N L+ +  +     + + ++K+M ++G  
Sbjct: 69  GHIKRSEAFSVFNHLIDMQP----TPPISSFNTLLGAVAKIKRYFDVISLYKRMSLIGLA 124

Query: 428 PDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQL 487
           PD +T   LI+ +     +D  + +  +M   G SP+T T++ ++  L     +  A  L
Sbjct: 125 PDFITLNILINCYCNLNKVDFGLAVLGEMLRRGHSPNTVTFTSLVKGLCLGSRISEATGL 184

Query: 488 FCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDM--QNAGF----EPDKVTYSIV 541
             +MV  G  PN+VTY  ++       N   A+KL+ +M   N GF    +P+ V Y  +
Sbjct: 185 LRKMVRMGYRPNVVTYGTLLNGLCMTGNTMLAVKLHEEMLNGNGGFGVTIKPNLVCYCTI 244

Query: 542 MEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGL 601
           ++ L   G +D+ + +F EM+ +   PD   Y  ++      G    A   +  M+  G+
Sbjct: 245 IDSLCKDGLIDKGKELFLEMKGRGISPDVVAYSSIIHGMCHTGRWEGAKGLFNEMVDEGV 304

Query: 602 RPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTY-TLLLSCCTEAR 654
            PNV T N L+ A  + G++ +A HLL+ M+  G  P   TY TL+   C E R
Sbjct: 305 HPNVVTFNVLIDALCKAGKMEEANHLLKLMIQRGESPDTFTYNTLIDGFCLEGR 358



 Score =  125 bits (314), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 86/317 (27%), Positives = 150/317 (47%), Gaps = 12/317 (3%)

Query: 362 TYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQM 421
           ++ T++G + + +++  +  L  +M   G  P+ +T N LI+ Y   N ++  L V  +M
Sbjct: 94  SFNTLLGAVAKIKRYFDVISLYKRMSLIGLAPDFITLNILINCYCNLNKVDFGLAVLGEM 153

Query: 422 QVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHL 481
              G  P+ VT+ +L+        +  A  + +KM   G  P+  TY  ++N L   G+ 
Sbjct: 154 LRRGHSPNTVTFTSLVKGLCLGSRISEATGLLRKMVRMGYRPNVVTYGTLLNGLCMTGNT 213

Query: 482 QAAHQLFCEMVNQG------CIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDK 535
             A +L  EM+N          PNLV Y  +I    K        +L+ +M+  G  PD 
Sbjct: 214 MLAVKLHEEMLNGNGGFGVTIKPNLVCYCTIIDSLCKDGLIDKGKELFLEMKGRGISPDV 273

Query: 536 VTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEA 595
           V YS ++  + H G  + A+ +F EM  +   P+   + +L+D   KAG + +A    + 
Sbjct: 274 VAYSSIIHGMCHTGRWEGAKGLFNEMVDEGVHPNVVTFNVLIDALCKAGKMEEANHLLKL 333

Query: 596 MLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS--C---- 649
           M+Q G  P+  T N+L+  F   G++ DA  L   M + G++    +Y +L++  C    
Sbjct: 334 MIQRGESPDTFTYNTLIDGFCLEGRIDDARDLFVSMESKGIETDAVSYNVLINGYCKSGR 393

Query: 650 CTEARSPYDMGFCHELM 666
             EA+  Y    C E+M
Sbjct: 394 MVEAKKLYREMMCKEIM 410



 Score = 93.2 bits (230), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 81/342 (23%), Positives = 141/342 (41%), Gaps = 8/342 (2%)

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAG-FLDVAMDMYKKMQAAGLSPDTFTYSV 470
           +EA  VF  +  +   P   ++ TL+   AK   + DV + +YK+M   GL+PD  T ++
Sbjct: 74  SEAFSVFNHLIDMQPTPPISSFNTLLGAVAKIKRYFDV-ISLYKRMSLIGLAPDFITLNI 132

Query: 471 IINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAG 530
           +INC      +     +  EM+ +G  PN VT+  ++           A  L R M   G
Sbjct: 133 LINCYCNLNKVDFGLAVLGEMLRRGHSPNTVTFTSLVKGLCLGSRISEATGLLRKMVRMG 192

Query: 531 FEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKN------WVPDEPVYGLLVDLWGKAG 584
           + P+ VTY  ++  L   G    A  +  EM   N        P+   Y  ++D   K G
Sbjct: 193 YRPNVVTYGTLLNGLCMTGNTMLAVKLHEEMLNGNGGFGVTIKPNLVCYCTIIDSLCKDG 252

Query: 585 NVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYT 644
            + K  E +  M   G+ P+V   +S++      G+   A  L   M++ G+ P++ T+ 
Sbjct: 253 LIDKGKELFLEMKGRGISPDVVAYSSIIHGMCHTGRWEGAKGLFNEMVDEGVHPNVVTFN 312

Query: 645 LLLSCCTEARSPYDMGFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSE 704
           +L+    +A    +     +LM   G     F  +    G   +   D        M S+
Sbjct: 313 VLIDALCKAGKMEEANHLLKLMIQRGESPDTFTYNTLIDGFCLEGRIDDARDLFVSMESK 372

Query: 705 DRESKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAV 746
             E+     + +++   KSG   EA  ++     K + P  +
Sbjct: 373 GIETDAVSYNVLINGYCKSGRMVEAKKLYREMMCKEIMPTVI 414



 Score = 77.0 bits (188), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 75/298 (25%), Positives = 122/298 (40%), Gaps = 44/298 (14%)

Query: 473 NCLGKAGHLQ--AAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAG 530
           NC  K+GH++   A  +F  +++    P + ++N ++   AK + Y   + LY+ M   G
Sbjct: 65  NC--KSGHIKRSEAFSVFNHLIDMQPTPPISSFNTLLGAVAKIKRYFDVISLYKRMSLIG 122

Query: 531 FEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAW 590
             PD +T +I++    +   +D   AV  EM R+   P+   +  LV        + +A 
Sbjct: 123 LAPDFITLNILINCYCNLNKVDFGLAVLGEMLRRGHSPNTVTFTSLVKGLCLGSRISEAT 182

Query: 591 EWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLN------LGLKPSLQTYT 644
                M++ G RPNV T  +LL+     G    A  L + MLN      + +KP+L  Y 
Sbjct: 183 GLLRKMVRMGYRPNVVTYGTLLNGLCMTGNTMLAVKLHEEMLNGNGGFGVTIKPNLVCY- 241

Query: 645 LLLSCCTEARSPYDMGFCHELMAVSGHPAHMFLLSMPSPG--PDGQNVRDHVGSFLEMMH 702
                CT   S      C + +   G       L M   G  PD   V  +      M H
Sbjct: 242 -----CTIIDS-----LCKDGLIDKGKE---LFLEMKGRGISPD---VVAYSSIIHGMCH 285

Query: 703 SEDRESKRGL---------------VDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDA 745
           +   E  +GL                + ++D L K+G  EEA  + ++  Q+   PD 
Sbjct: 286 TGRWEGAKGLFNEMVDEGVHPNVVTFNVLIDALCKAGKMEEANHLLKLMIQRGESPDT 343


>gi|224086515|ref|XP_002307901.1| predicted protein [Populus trichocarpa]
 gi|222853877|gb|EEE91424.1| predicted protein [Populus trichocarpa]
          Length = 724

 Score =  156 bits (395), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 94/300 (31%), Positives = 158/300 (52%), Gaps = 1/300 (0%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           G+  D  T++T+V  L +   FG+  +L++ M   GC+PN+ TY  LI  + +   L EA
Sbjct: 377 GYVPDVFTFSTLVNGLCKKGLFGSALELVNDMDAKGCKPNLNTYTILIDGFCKKGQLEEA 436

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
             + ++M   G   + V Y  LI    K G +  A+DM+ +M + G  PD FT++ +I  
Sbjct: 437 GLILREMLTKGFSLNTVGYNALISALCKHGKIHEALDMFGEMSSKGCKPDIFTFNSLIFG 496

Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPD 534
           L +   ++ A  L+ +MV +G I N VT+N +I    +    Q ALKL  DM   G   D
Sbjct: 497 LCRVDEMEDALALYRDMVLEGVIANSVTFNTLIHAFLRRGEIQEALKLVNDMLFRGCPLD 556

Query: 535 KVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYE 594
           ++TY+ +++ L   G +++   +F EM RK   P      +L++ +  AG V  A E+  
Sbjct: 557 EITYNGLIKALCKTGAVEKGLGLFEEMIRKGLTPSIITCNILINGFCTAGKVHNALEFMR 616

Query: 595 AMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTY-TLLLSCCTEA 653
            M+  G  P++ T NSL++   + G++ +A +L + +   G++P   TY TL+   C E 
Sbjct: 617 DMIHRGFSPDIVTYNSLINGLCKRGRIQEALNLFEKLQAEGIQPDSITYNTLICWLCREG 676



 Score =  151 bits (382), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 91/313 (29%), Positives = 154/313 (49%), Gaps = 1/313 (0%)

Query: 361 HTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQ 420
           H  T + G +   R   A   + D+M+ +G  P+V T++ L++   +      AL++   
Sbjct: 348 HFNTLVNGFVRNGRLNEATAFVYDKMINNGYVPDVFTFSTLVNGLCKKGLFGSALELVND 407

Query: 421 MQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGH 480
           M   GC+P+  TY  LID   K G L+ A  + ++M   G S +T  Y+ +I+ L K G 
Sbjct: 408 MDAKGCKPNLNTYTILIDGFCKKGQLEEAGLILREMLTKGFSLNTVGYNALISALCKHGK 467

Query: 481 LQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSI 540
           +  A  +F EM ++GC P++ T+N +I    +    + AL LYRDM   G   + VT++ 
Sbjct: 468 IHEALDMFGEMSSKGCKPDIFTFNSLIFGLCRVDEMEDALALYRDMVLEGVIANSVTFNT 527

Query: 541 VMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAG 600
           ++      G + EA  +  +M  +    DE  Y  L+    K G V K    +E M++ G
Sbjct: 528 LIHAFLRRGEIQEALKLVNDMLFRGCPLDEITYNGLIKALCKTGAVEKGLGLFEEMIRKG 587

Query: 601 LRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS-CCTEARSPYDM 659
           L P++ TCN L++ F   G++ +A   ++ M++ G  P + TY  L++  C   R    +
Sbjct: 588 LTPSIITCNILINGFCTAGKVHNALEFMRDMIHRGFSPDIVTYNSLINGLCKRGRIQEAL 647

Query: 660 GFCHELMAVSGHP 672
               +L A    P
Sbjct: 648 NLFEKLQAEGIQP 660



 Score =  135 bits (340), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 109/402 (27%), Positives = 186/402 (46%), Gaps = 13/402 (3%)

Query: 359 DEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVF 418
           D +T+ T++    R  +     KL+D+M+  G  PN +TY  L+H   +   ++EA  + 
Sbjct: 279 DVNTFNTVIYGFCRLNRVLEGAKLVDRMILKGFTPNDMTYGYLMHGLCKTCRIDEAQALL 338

Query: 419 KQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMD-MYKKMQAAGLSPDTFTYSVIINCLGK 477
            ++      P+ V + TL++   + G L+ A   +Y KM   G  PD FT+S ++N L K
Sbjct: 339 SKVP----GPNVVHFNTLVNGFVRNGRLNEATAFVYDKMINNGYVPDVFTFSTLVNGLCK 394

Query: 478 AGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVT 537
            G   +A +L  +M  +GC PNL TY I+I    K    + A  + R+M   GF  + V 
Sbjct: 395 KGLFGSALELVNDMDAKGCKPNLNTYTILIDGFCKKGQLEEAGLILREMLTKGFSLNTVG 454

Query: 538 YSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAML 597
           Y+ ++  L   G + EA  +F EM  K   PD   +  L+    +   +  A   Y  M+
Sbjct: 455 YNALISALCKHGKIHEALDMFGEMSSKGCKPDIFTFNSLIFGLCRVDEMEDALALYRDMV 514

Query: 598 QAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYT-LLLSCCTEARSP 656
             G+  N  T N+L+ AFLR G++ +A  L+  ML  G      TY  L+ + C      
Sbjct: 515 LEGVIANSVTFNTLIHAFLRRGEIQEALKLVNDMLFRGCPLDEITYNGLIKALCKTGAVE 574

Query: 657 YDMGFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMH---SEDRESKRGLV 713
             +G   E++     P+ +    + +       V + +    +M+H   S D  +   L+
Sbjct: 575 KGLGLFEEMIRKGLTPSIITCNILINGFCTAGKVHNALEFMRDMIHRGFSPDIVTYNSLI 634

Query: 714 DAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAVKEKGMSYWL 755
           +     L K G  +EA +++E    + + PD++    +  WL
Sbjct: 635 NG----LCKRGRIQEALNLFEKLQAEGIQPDSITYNTLICWL 672



 Score =  129 bits (323), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 79/293 (26%), Positives = 146/293 (49%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           G K + +TYT ++    +  Q      +L +M+  G   N V YN LI +  +   ++EA
Sbjct: 412 GCKPNLNTYTILIDGFCKKGQLEEAGLILREMLTKGFSLNTVGYNALISALCKHGKIHEA 471

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
           LD+F +M   GC+PD  T+ +LI    +   ++ A+ +Y+ M   G+  ++ T++ +I+ 
Sbjct: 472 LDMFGEMSSKGCKPDIFTFNSLIFGLCRVDEMEDALALYRDMVLEGVIANSVTFNTLIHA 531

Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPD 534
             + G +Q A +L  +M+ +GC  + +TYN +I    K    +  L L+ +M   G  P 
Sbjct: 532 FLRRGEIQEALKLVNDMLFRGCPLDEITYNGLIKALCKTGAVEKGLGLFEEMIRKGLTPS 591

Query: 535 KVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYE 594
            +T +I++      G +  A     +M  + + PD   Y  L++   K G +++A   +E
Sbjct: 592 IITCNILINGFCTAGKVHNALEFMRDMIHRGFSPDIVTYNSLINGLCKRGRIQEALNLFE 651

Query: 595 AMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
            +   G++P+  T N+L+    R G   DA  LL   +  G  P+  T+ +L+
Sbjct: 652 KLQAEGIQPDSITYNTLICWLCREGAFDDACFLLYRGVENGFVPNDVTWNILV 704



 Score =  127 bits (318), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 119/501 (23%), Positives = 211/501 (42%), Gaps = 12/501 (2%)

Query: 271 FSKPSREMKIPAGLAPFSRHFASTGNVVESVSRILRQWKWGPLAEEALGNTNYSMDAYQA 330
           F K       P+G       F S  N  ES      +    P   + L  +   +  +Q 
Sbjct: 17  FIKTQSLSLFPSGFVRKFSGFNSKDN--ESAHETEWERLLKPFDLKELRRSFNKITPFQL 74

Query: 331 NQVLKQLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDG 390
            ++L+   D   ++  F W   Q G+ H    Y  ++  LG A  F  I++LL QM  +G
Sbjct: 75  CKLLELPLDVETSMEIFKWAGAQKGYCHSFSVYYLLIDKLGAAAGFKVIDRLLLQMKEEG 134

Query: 391 CQPNVVTYNRLIHSYGRANYLNEALDVFKQMQ-VVGCEPDRVTYCTLIDIHAKAGFLDVA 449
                  +  ++  YGRA    +A  +   M+ V  CEP   +Y  ++D+        VA
Sbjct: 135 IVFRESLFILIMKYYGRAGLPGQATRLLLDMKGVYCCEPSFRSYNVVLDVLVVGNCPSVA 194

Query: 450 MDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIAL 509
            +++  M + G+SP+ +T+ +++  L     +  A  L  +M   GC+PN + Y  +I  
Sbjct: 195 SNVFYDMLSKGVSPNDYTFGLVMKALCMVNEVDNACLLLRDMTKHGCVPNSMIYQTLIDA 254

Query: 510 QAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPD 569
            +K      ALKL  +M   G  PD  T++ V+        + E   +   M  K + P+
Sbjct: 255 LSKRDRVDEALKLLEEMFLMGCPPDVNTFNTVIYGFCRLNRVLEGAKLVDRMILKGFTPN 314

Query: 570 EPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLL- 628
           +  YG L+    K   + +A    +A+L     PNV   N+L++ F+R G+L++A   + 
Sbjct: 315 DMTYGYLMHGLCKTCRIDEA----QALLSKVPGPNVVHFNTLVNGFVRNGRLNEATAFVY 370

Query: 629 QGMLNLGLKPSLQTY-TLLLSCCTEARSPYDMGFCHELMAVSGHP-AHMFLLSMPSPGPD 686
             M+N G  P + T+ TL+   C +      +   +++ A    P  + + + +      
Sbjct: 371 DKMINNGYVPDVFTFSTLVNGLCKKGLFGSALELVNDMDAKGCKPNLNTYTILIDGFCKK 430

Query: 687 GQNVRDHVGSFLEMMHSEDRESKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAV 746
           GQ   +  G  L  M ++         +A++  L K G   EA  ++   + K   PD  
Sbjct: 431 GQ--LEEAGLILREMLTKGFSLNTVGYNALISALCKHGKIHEALDMFGEMSSKGCKPDIF 488

Query: 747 KEKGMSYWLINLHVMSDGTAV 767
               + + L  +  M D  A+
Sbjct: 489 TFNSLIFGLCRVDEMEDALAL 509



 Score =  122 bits (307), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 78/266 (29%), Positives = 132/266 (49%), Gaps = 4/266 (1%)

Query: 323 YSMDAYQANQVLKQLQDHTV---ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAI 379
           +S++    N ++  L  H     AL  F  +  + G K D  T+ +++  L R  +    
Sbjct: 448 FSLNTVGYNALISALCKHGKIHEALDMFGEMSSK-GCKPDIFTFNSLIFGLCRVDEMEDA 506

Query: 380 NKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDI 439
             L   MV +G   N VT+N LIH++ R   + EAL +   M   GC  D +TY  LI  
Sbjct: 507 LALYRDMVLEGVIANSVTFNTLIHAFLRRGEIQEALKLVNDMLFRGCPLDEITYNGLIKA 566

Query: 440 HAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPN 499
             K G ++  + ++++M   GL+P   T +++IN    AG +  A +   +M+++G  P+
Sbjct: 567 LCKTGAVEKGLGLFEEMIRKGLTPSIITCNILINGFCTAGKVHNALEFMRDMIHRGFSPD 626

Query: 500 LVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFA 559
           +VTYN +I    K    Q AL L+  +Q  G +PD +TY+ ++  L   G  D+A  +  
Sbjct: 627 IVTYNSLINGLCKRGRIQEALNLFEKLQAEGIQPDSITYNTLICWLCREGAFDDACFLLY 686

Query: 560 EMRRKNWVPDEPVYGLLVDLWGKAGN 585
                 +VP++  + +LV  +GK  N
Sbjct: 687 RGVENGFVPNDVTWNILVYNFGKQSN 712


>gi|357164338|ref|XP_003580022.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
           mitochondrial-like [Brachypodium distachyon]
          Length = 966

 Score =  156 bits (395), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 97/311 (31%), Positives = 156/311 (50%), Gaps = 16/311 (5%)

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
           + GF  D  TYT ++  L +A++      L  +M R G  P+V TY  LI S+ +A  + 
Sbjct: 445 RKGFVPDTSTYTKVITFLCQAKKVEKSFLLFQEMKRAGVNPDVYTYTILIDSFCKAGLIE 504

Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
           +A   F +M+ VGC P+ VTY  L+  + K+  L  A D++ +M  A   P+  TYS +I
Sbjct: 505 QARSWFDEMRSVGCSPNVVTYTALLHAYLKSKQLIQAHDIFHRMVDAACYPNAVTYSALI 564

Query: 473 NCLGKAGHLQAAHQLFCEMV--------------NQGCI--PNLVTYNIMIALQAKARNY 516
           + L KAG +Q A +++ +++              N  C   PN+VTY  +I    KA+  
Sbjct: 565 DGLCKAGEIQKACEVYEKLIGTSGNVESDFYFEGNDTCTIAPNVVTYGALIDGLCKAQKV 624

Query: 517 QSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLL 576
             A +L   M  AG EP+++ Y  +++     G +D A+ VF  M +  ++P    Y  L
Sbjct: 625 SDAHELLDAMLAAGCEPNQIVYDALIDGFCKIGKIDNAQEVFLRMTKCGYLPSVHTYTSL 684

Query: 577 VDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGL 636
           +D   K G +  A +    ML     PNV T  +++    +VG++  A +LL  M   G 
Sbjct: 685 IDRMFKDGRLDLAMKVLSEMLNDSCNPNVVTYTAMIDGLSKVGEIEKALNLLSLMEEKGC 744

Query: 637 KPSLQTYTLLL 647
            P++ TYT L+
Sbjct: 745 SPNVVTYTALI 755



 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 109/385 (28%), Positives = 173/385 (44%), Gaps = 25/385 (6%)

Query: 285 APFSRHFASTGNVVESVSRILRQWKWGPLAEEALGNTNYSMDAYQANQVLKQLQDHTVAL 344
           A FSR     G   E   +IL++        +    T       QA +V K         
Sbjct: 421 ANFSRCLCGVGKF-EKAFQILKEMMRKGFVPDTSTYTKVITFLCQAKKVEKSFL------ 473

Query: 345 GFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHS 404
             F  ++R AG   D +TYT ++    +A          D+M   GC PNVVTY  L+H+
Sbjct: 474 -LFQEMKR-AGVNPDVYTYTILIDSFCKAGLIEQARSWFDEMRSVGCSPNVVTYTALLHA 531

Query: 405 YGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKM-------- 456
           Y ++  L +A D+F +M    C P+ VTY  LID   KAG +  A ++Y+K+        
Sbjct: 532 YLKSKQLIQAHDIFHRMVDAACYPNAVTYSALIDGLCKAGEIQKACEVYEKLIGTSGNVE 591

Query: 457 --------QAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIA 508
                       ++P+  TY  +I+ L KA  +  AH+L   M+  GC PN + Y+ +I 
Sbjct: 592 SDFYFEGNDTCTIAPNVVTYGALIDGLCKAQKVSDAHELLDAMLAAGCEPNQIVYDALID 651

Query: 509 LQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVP 568
              K     +A +++  M   G+ P   TY+ +++ +   G LD A  V +EM   +  P
Sbjct: 652 GFCKIGKIDNAQEVFLRMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSEMLNDSCNP 711

Query: 569 DEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLL 628
           +   Y  ++D   K G + KA      M + G  PNV T  +L+    + G+   +  L 
Sbjct: 712 NVVTYTAMIDGLSKVGEIEKALNLLSLMEEKGCSPNVVTYTALIDGLGKTGKADASLKLF 771

Query: 629 QGMLNLGLKPSLQTYTLLLSCCTEA 653
           + M + G  P+  TY +L++ C  A
Sbjct: 772 KQMNSKGCAPNYVTYRVLINHCCAA 796



 Score =  153 bits (387), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 100/345 (28%), Positives = 163/345 (47%), Gaps = 43/345 (12%)

Query: 362 TYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQM 421
           TY  ++  L +A++    ++LLD M+  GC+PN + Y+ LI  + +   ++ A +VF +M
Sbjct: 610 TYGALIDGLCKAQKVSDAHELLDAMLAAGCEPNQIVYDALIDGFCKIGKIDNAQEVFLRM 669

Query: 422 QVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHL 481
              G  P   TY +LID   K G LD+AM +  +M     +P+  TY+ +I+ L K G +
Sbjct: 670 TKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSEMLNDSCNPNVVTYTAMIDGLSKVGEI 729

Query: 482 QAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIV 541
           + A  L   M  +GC PN+VTY  +I    K     ++LKL++ M + G  P+ VTY ++
Sbjct: 730 EKALNLLSLMEEKGCSPNVVTYTALIDGLGKTGKADASLKLFKQMNSKGCAPNYVTYRVL 789

Query: 542 MEVLGHCGYLDEAEAVFAEMRRKNW---------------------------------VP 568
           +      G LDEA  +  EM+  +W                                 VP
Sbjct: 790 INHCCAAGLLDEAHLLLDEMKHTHWPKHLQGYHCAVQGFSKKFIASLGLLEEMESHETVP 849

Query: 569 DEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCN---SLLSAFLRVGQLSDAY 625
             PVYG+L+D + KAG +  A E ++ +++     N+ +     SL+ A     Q+ +A+
Sbjct: 850 IAPVYGMLIDSFSKAGRLETALELHKELVEVSSSLNMTSTGMYASLIQALCLASQVEEAF 909

Query: 626 HLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYD------MGFCHE 664
            L   M   G+ P L  +  L+    E  + +D       G CHE
Sbjct: 910 TLYTEMTRKGIVPDLIVFVSLVKGLIEV-NKWDEALQLCYGRCHE 953



 Score =  132 bits (333), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 82/297 (27%), Positives = 146/297 (49%), Gaps = 22/297 (7%)

Query: 370 LGRARQFGAINKLLDQMVRDGC---QPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGC 426
           L  A     + K+ ++M+   C   + N   ++R +   G+     +A  + K+M   G 
Sbjct: 392 LPNAELLDLVEKVYEEMLAASCVLNKVNTANFSRCLCGVGK---FEKAFQILKEMMRKGF 448

Query: 427 EPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQ 486
            PD  TY  +I    +A  ++ +  ++++M+ AG++PD +TY+++I+   KAG ++ A  
Sbjct: 449 VPDTSTYTKVITFLCQAKKVEKSFLLFQEMKRAGVNPDVYTYTILIDSFCKAGLIEQARS 508

Query: 487 LFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLG 546
            F EM + GC PN+VTY  ++    K++    A  ++  M +A   P+ VTYS +++ L 
Sbjct: 509 WFDEMRSVGCSPNVVTYTALLHAYLKSKQLIQAHDIFHRMVDAACYPNAVTYSALIDGLC 568

Query: 547 HCGYLDEAEAVFAEM----------------RRKNWVPDEPVYGLLVDLWGKAGNVRKAW 590
             G + +A  V+ ++                      P+   YG L+D   KA  V  A 
Sbjct: 569 KAGEIQKACEVYEKLIGTSGNVESDFYFEGNDTCTIAPNVVTYGALIDGLCKAQKVSDAH 628

Query: 591 EWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
           E  +AML AG  PN    ++L+  F ++G++ +A  +   M   G  PS+ TYT L+
Sbjct: 629 ELLDAMLAAGCEPNQIVYDALIDGFCKIGKIDNAQEVFLRMTKCGYLPSVHTYTSLI 685



 Score = 95.5 bits (236), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 93/410 (22%), Positives = 146/410 (35%), Gaps = 108/410 (26%)

Query: 346 FFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSY 405
           FF W  RQ G+ H    Y  +  ILG         +LL ++  D  +      N L+   
Sbjct: 120 FFLWAERQVGYSHTGACYDALAEILGFEDPARTAERLLREIGEDDREVLRRLLNVLVRRC 179

Query: 406 GRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDT 465
            R    +EAL+   +++  G  P  VTY  L+ + A AG +++   + K+M A+G   D 
Sbjct: 180 CRHGLWDEALEELGRLKDFGYRPSAVTYNALVQVLASAGQVEMGFRVQKEMSASGFCMDR 239

Query: 466 FTYSVIINCLGKAGHLQAAHQL-----------FCEMVNQG------------------- 495
            T       L K G    A  +            C  +  G                   
Sbjct: 240 STIGYFAQALCKVGRWADALNMLEKEDFNLDTVLCTQMISGLMEASLFNEAMSFLHRMRC 299

Query: 496 --CIPNLVTYNIMIA--LQAK---------------------------------ARNYQS 518
             CIPN+VTY  +++  L+ K                                 A +Y  
Sbjct: 300 NSCIPNVVTYRTLLSGFLKKKQFGWCKRIINMMMTEGCNPNPSLFNSLVHGYCNAGDYAY 359

Query: 519 ALKLYRDMQNAGFEPDKVTYSIVM------------------------------------ 542
           A KL+  M   G  P  V Y+I +                                    
Sbjct: 360 AYKLFNRMTTCGSPPGYVAYNIFIGSICGQEELPNAELLDLVEKVYEEMLAASCVLNKVN 419

Query: 543 -----EVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAML 597
                  L   G  ++A  +  EM RK +VPD   Y  ++    +A  V K++  ++ M 
Sbjct: 420 TANFSRCLCGVGKFEKAFQILKEMMRKGFVPDTSTYTKVITFLCQAKKVEKSFLLFQEMK 479

Query: 598 QAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
           +AG+ P+V T   L+ +F + G +  A      M ++G  P++ TYT LL
Sbjct: 480 RAGVNPDVYTYTILIDSFCKAGLIEQARSWFDEMRSVGCSPNVVTYTALL 529



 Score = 67.8 bits (164), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 54/209 (25%), Positives = 90/209 (43%), Gaps = 36/209 (17%)

Query: 350 LRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRAN 409
           L  + G   +  TYT ++  LG+  +  A  KL  QM   GC PN VTY  LI+    A 
Sbjct: 738 LMEEKGCSPNVVTYTALIDGLGKTGKADASLKLFKQMNSKGCAPNYVTYRVLINHCCAAG 797

Query: 410 YLNEA---------------------------------LDVFKQMQVVGCEPDRVTYCTL 436
            L+EA                                 L + ++M+     P    Y  L
Sbjct: 798 LLDEAHLLLDEMKHTHWPKHLQGYHCAVQGFSKKFIASLGLLEEMESHETVPIAPVYGML 857

Query: 437 IDIHAKAGFLDVAMDMYKKMQAAGLSPD---TFTYSVIINCLGKAGHLQAAHQLFCEMVN 493
           ID  +KAG L+ A++++K++     S +   T  Y+ +I  L  A  ++ A  L+ EM  
Sbjct: 858 IDSFSKAGRLETALELHKELVEVSSSLNMTSTGMYASLIQALCLASQVEEAFTLYTEMTR 917

Query: 494 QGCIPNLVTYNIMIALQAKARNYQSALKL 522
           +G +P+L+ +  ++    +   +  AL+L
Sbjct: 918 KGIVPDLIVFVSLVKGLIEVNKWDEALQL 946


>gi|242035429|ref|XP_002465109.1| hypothetical protein SORBIDRAFT_01g032160 [Sorghum bicolor]
 gi|241918963|gb|EER92107.1| hypothetical protein SORBIDRAFT_01g032160 [Sorghum bicolor]
          Length = 1153

 Score =  156 bits (395), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 86/304 (28%), Positives = 161/304 (52%)

Query: 349 WLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRA 408
           W  + +  K D  TY T++   G +    ++ ++ + MV DG   N+V+Y  ++ +  + 
Sbjct: 307 WKMKASDQKPDRVTYITLLDKCGDSGDSQSVMEIWNAMVADGYNDNIVSYTAVVDALCQV 366

Query: 409 NYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTY 468
             L+EAL VF +M+  G  P++ +Y +LI    KA   D A++++  M A G SP+ +T+
Sbjct: 367 GRLDEALAVFDEMKEKGISPEQYSYNSLISGFLKADMFDRALELFNHMNACGPSPNGYTH 426

Query: 469 SVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQN 528
            + IN  GK+G    A Q +  M ++G +P++   N +++  A++     A +++ ++++
Sbjct: 427 VLFINYYGKSGQSLKAIQRYEHMKSKGIVPDVAAANAVLSSLARSGRLGMAKRVFYELKD 486

Query: 529 AGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRK 588
            G  PD +TY+++++        DEA   F++M     VPD      L+D   K G   +
Sbjct: 487 MGVSPDTITYTMMIKCCSKASKADEAMNFFSDMVETGCVPDVLALNSLIDTLYKGGKGNE 546

Query: 589 AWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
           AW+ +  + +  + P   T N+LLS   R G++ +  HLL+ M +    P+L TY  +L 
Sbjct: 547 AWKLFHQLKEMKIEPTNGTYNTLLSGLGREGKVKEVMHLLEEMTHSIHPPNLITYNTVLD 606

Query: 649 CCTE 652
           C ++
Sbjct: 607 CLSK 610



 Score =  155 bits (392), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 90/329 (27%), Positives = 167/329 (50%), Gaps = 1/329 (0%)

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
           + G      TY+ ++   G+ R    +  LL++M   G +PNV +Y   I   G+A   +
Sbjct: 206 EDGISPSVRTYSVLMVSFGKKRDVDTVLWLLNEMEARGVKPNVYSYTICIRVLGQAARFD 265

Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
           EA  +  +M+  GC+PD VT+  +I +   AG L  A D++ KM+A+   PD  TY  ++
Sbjct: 266 EAYQILGKMEDSGCKPDVVTHTVVIQVLCDAGRLSDAKDVFWKMKASDQKPDRVTYITLL 325

Query: 473 NCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFE 532
           +  G +G  Q+  +++  MV  G   N+V+Y  ++    +      AL ++ +M+  G  
Sbjct: 326 DKCGDSGDSQSVMEIWNAMVADGYNDNIVSYTAVVDALCQVGRLDEALAVFDEMKEKGIS 385

Query: 533 PDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEW 592
           P++ +Y+ ++         D A  +F  M      P+   + L ++ +GK+G   KA + 
Sbjct: 386 PEQYSYNSLISGFLKADMFDRALELFNHMNACGPSPNGYTHVLFINYYGKSGQSLKAIQR 445

Query: 593 YEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTE 652
           YE M   G+ P+V   N++LS+  R G+L  A  +   + ++G+ P   TYT+++ CC++
Sbjct: 446 YEHMKSKGIVPDVAAANAVLSSLARSGRLGMAKRVFYELKDMGVSPDTITYTMMIKCCSK 505

Query: 653 A-RSPYDMGFCHELMAVSGHPAHMFLLSM 680
           A ++   M F  +++     P  + L S+
Sbjct: 506 ASKADEAMNFFSDMVETGCVPDVLALNSL 534



 Score =  153 bits (386), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 94/318 (29%), Positives = 160/318 (50%), Gaps = 4/318 (1%)

Query: 333  VLKQLQDHTVAL---GFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRD 389
            +++ L  H  AL     FN  +   G      +Y +++  L           L  +M R 
Sbjct: 744  LIRHLCKHKKALEAHQLFNKFK-GLGVSLKTGSYNSLIRGLVDENLIDIAEDLFTEMKRL 802

Query: 390  GCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVA 449
            GC P+  TYN ++ + G++  + E L V  +M   G E   VTY T+I    K+  L+ A
Sbjct: 803  GCGPDEFTYNLILDAMGKSMRIEEMLRVQAEMHRKGYESTYVTYNTIISGLVKSKRLEQA 862

Query: 450  MDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIAL 509
            +D+Y  + + G SP   TY  +++ L KAG +  A  LF EM+  GC PN   YNI++  
Sbjct: 863  IDLYYNLMSEGFSPTPCTYGPLLDGLLKAGKMVDAENLFNEMLEYGCKPNCTIYNILLNG 922

Query: 510  QAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPD 569
               A N ++  +++  M   G  PD  +Y+++++ L   G L++  + F ++      PD
Sbjct: 923  HRIAGNTENVCQIFEKMVEQGINPDIKSYTVLIDTLCTAGRLNDGLSYFRQLLELGLEPD 982

Query: 570  EPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQ 629
              +Y LL+D  GK+  + +A   +  M + G+ PN+ T NSL+    + G+ S+A  + +
Sbjct: 983  LIIYNLLIDGLGKSERIEEAVCLFNEMKKKGIVPNLYTYNSLILHLGKAGKASEAAQMYE 1042

Query: 630  GMLNLGLKPSLQTYTLLL 647
             +L  G KP++ TY  L+
Sbjct: 1043 ELLIKGWKPNVFTYNALI 1060



 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 96/345 (27%), Positives = 171/345 (49%), Gaps = 15/345 (4%)

Query: 284  LAPFSRHFASTGNVVESVSRILRQWKWGPLAEEALGNTNYSMDAYQANQVLKQLQDHT-- 341
            L P  RH       +E+  ++  ++K        LG    S+     N +++ L D    
Sbjct: 741  LCPLIRHLCKHKKALEA-HQLFNKFK-------GLG---VSLKTGSYNSLIRGLVDENLI 789

Query: 342  -VALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNR 400
             +A   F  ++R  G   DE TY  ++  +G++ +   + ++  +M R G +   VTYN 
Sbjct: 790  DIAEDLFTEMKR-LGCGPDEFTYNLILDAMGKSMRIEEMLRVQAEMHRKGYESTYVTYNT 848

Query: 401  LIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAG 460
            +I    ++  L +A+D++  +   G  P   TY  L+D   KAG +  A +++ +M   G
Sbjct: 849  IISGLVKSKRLEQAIDLYYNLMSEGFSPTPCTYGPLLDGLLKAGKMVDAENLFNEMLEYG 908

Query: 461  LSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSAL 520
              P+   Y++++N    AG+ +   Q+F +MV QG  P++ +Y ++I     A      L
Sbjct: 909  CKPNCTIYNILLNGHRIAGNTENVCQIFEKMVEQGINPDIKSYTVLIDTLCTAGRLNDGL 968

Query: 521  KLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLW 580
              +R +   G EPD + Y+++++ LG    ++EA  +F EM++K  VP+   Y  L+   
Sbjct: 969  SYFRQLLELGLEPDLIIYNLLIDGLGKSERIEEAVCLFNEMKKKGIVPNLYTYNSLILHL 1028

Query: 581  GKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAY 625
            GKAG   +A + YE +L  G +PNV T N+L+  +   G   +AY
Sbjct: 1029 GKAGKASEAAQMYEELLIKGWKPNVFTYNALIRGYSVSGSTDNAY 1073



 Score =  139 bits (349), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 137/544 (25%), Positives = 234/544 (43%), Gaps = 65/544 (11%)

Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLI 402
           AL  F    RQ    H   +   M+ ++    + G + ++ D M +   + NV T+  + 
Sbjct: 91  ALELFTAAARQPTAVHTTESCNYMLELMRAHGRVGDMAQVFDLMQKQIVKANVGTFATVF 150

Query: 403 HSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLS 462
              G    L  A      M+  G   +  TY  LI    K+GF   AM++YK M   G+S
Sbjct: 151 SGVGVQGGLRSAPVALPVMREAGMSLNGYTYNGLIYFLVKSGFDAEAMEVYKAMVEDGIS 210

Query: 463 PDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKL 522
           P   TYSV++   GK   +     L  EM  +G  PN+ +Y I I +  +A  +  A ++
Sbjct: 211 PSVRTYSVLMVSFGKKRDVDTVLWLLNEMEARGVKPNVYSYTICIRVLGQAARFDEAYQI 270

Query: 523 YRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGK 582
              M+++G +PD VT+++V++VL   G L +A+ VF +M+  +  PD   Y  L+D  G 
Sbjct: 271 LGKMEDSGCKPDVVTHTVVIQVLCDAGRLSDAKDVFWKMKASDQKPDRVTYITLLDKCGD 330

Query: 583 AGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQT 642
           +G+ +   E + AM+  G   N+ +  +++ A  +VG+L +A  +   M   G+ P   +
Sbjct: 331 SGDSQSVMEIWNAMVADGYNDNIVSYTAVVDALCQVGRLDEALAVFDEMKEKGISPEQYS 390

Query: 643 YTLLLSCCTEARSPYDMGFCHELMAVSGHPAHMFLLSMPSPGPDGQ------NVRDHVGS 696
           Y  L+S   +A    DM F   L   +    HM   +   P P+G       N     G 
Sbjct: 391 YNSLISGFLKA----DM-FDRALELFN----HM---NACGPSPNGYTHVLFINYYGKSGQ 438

Query: 697 FLEMMHSEDRESKRGLV------DAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAVK--- 747
            L+ +   +    +G+V      +AV+  L +SG    A  V+       V PD +    
Sbjct: 439 SLKAIQRYEHMKSKGIVPDVAAANAVLSSLARSGRLGMAKRVFYELKDMGVSPDTITYTM 498

Query: 748 -----------EKGMSYW--LINLHVMSDGTAVIALSRTL--------AW--FR--KQML 782
                      ++ M+++  ++    + D  A+ +L  TL        AW  F   K+M 
Sbjct: 499 MIKCCSKASKADEAMNFFSDMVETGCVPDVLALNSLIDTLYKGGKGNEAWKLFHQLKEMK 558

Query: 783 ISGVGPSRIDIVTGWGRRSRVTGTSLVRQAVQELLHMFSFP----------FFTENGNSG 832
           I     +   +++G GR  +V     V   ++E+ H    P            ++NG   
Sbjct: 559 IEPTNGTYNTLLSGLGREGKVKE---VMHLLEEMTHSIHPPNLITYNTVLDCLSKNGEVN 615

Query: 833 CFVG 836
           C +G
Sbjct: 616 CAIG 619



 Score =  133 bits (335), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 79/301 (26%), Positives = 146/301 (48%), Gaps = 1/301 (0%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           G+  +  +YT +V  L +  +      + D+M   G  P   +YN LI  + +A+  + A
Sbjct: 348 GYNDNIVSYTAVVDALCQVGRLDEALAVFDEMKEKGISPEQYSYNSLISGFLKADMFDRA 407

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
           L++F  M   G  P+  T+   I+ + K+G    A+  Y+ M++ G+ PD    + +++ 
Sbjct: 408 LELFNHMNACGPSPNGYTHVLFINYYGKSGQSLKAIQRYEHMKSKGIVPDVAAANAVLSS 467

Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPD 534
           L ++G L  A ++F E+ + G  P+ +TY +MI   +KA     A+  + DM   G  PD
Sbjct: 468 LARSGRLGMAKRVFYELKDMGVSPDTITYTMMIKCCSKASKADEAMNFFSDMVETGCVPD 527

Query: 535 KVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYE 594
            +  + +++ L   G  +EA  +F +++     P    Y  L+   G+ G V++     E
Sbjct: 528 VLALNSLIDTLYKGGKGNEAWKLFHQLKEMKIEPTNGTYNTLLSGLGREGKVKEVMHLLE 587

Query: 595 AMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTY-TLLLSCCTEA 653
            M  +   PN+ T N++L    + G+++ A  +L  M   G  P L +Y T++     E 
Sbjct: 588 EMTHSIHPPNLITYNTVLDCLSKNGEVNCAIGMLYSMTEKGCTPDLSSYNTVMYGLIKEE 647

Query: 654 R 654
           R
Sbjct: 648 R 648



 Score =  123 bits (309), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 76/305 (24%), Positives = 146/305 (47%), Gaps = 2/305 (0%)

Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLI 402
           AL  F+ ++ + G   ++++Y +++    +A  F    +L + M   G  PN  T+   I
Sbjct: 372 ALAVFDEMKEK-GISPEQYSYNSLISGFLKADMFDRALELFNHMNACGPSPNGYTHVLFI 430

Query: 403 HSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLS 462
           + YG++    +A+  ++ M+  G  PD      ++   A++G L +A  ++ +++  G+S
Sbjct: 431 NYYGKSGQSLKAIQRYEHMKSKGIVPDVAAANAVLSSLARSGRLGMAKRVFYELKDMGVS 490

Query: 463 PDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKL 522
           PDT TY+++I C  KA     A   F +MV  GC+P+++  N +I    K      A KL
Sbjct: 491 PDTITYTMMIKCCSKASKADEAMNFFSDMVETGCVPDVLALNSLIDTLYKGGKGNEAWKL 550

Query: 523 YRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGK 582
           +  ++    EP   TY+ ++  LG  G + E   +  EM      P+   Y  ++D   K
Sbjct: 551 FHQLKEMKIEPTNGTYNTLLSGLGREGKVKEVMHLLEEMTHSIHPPNLITYNTVLDCLSK 610

Query: 583 AGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQT 642
            G V  A     +M + G  P++ + N+++   ++  +  +A+ +   M  + L P   T
Sbjct: 611 NGEVNCAIGMLYSMTEKGCTPDLSSYNTVMYGLIKEERFEEAFRMFCQMKKI-LAPDYAT 669

Query: 643 YTLLL 647
              +L
Sbjct: 670 LCTIL 674



 Score =  123 bits (308), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 79/283 (27%), Positives = 136/283 (48%), Gaps = 32/283 (11%)

Query: 346  FFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSY 405
            ++N +    GF     TY  ++  L +A +      L ++M+  GC+PN   YN L++ +
Sbjct: 866  YYNLMSE--GFSPTPCTYGPLLDGLLKAGKMVDAENLFNEMLEYGCKPNCTIYNILLNGH 923

Query: 406  GRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDT 465
              A        +F++M   G  PD  +Y  LID    AG L+  +  ++++   GL PD 
Sbjct: 924  RIAGNTENVCQIFEKMVEQGINPDIKSYTVLIDTLCTAGRLNDGLSYFRQLLELGLEPDL 983

Query: 466  FTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRD 525
              Y+++I+ LGK+  ++ A  LF EM  +G +PNL TYN +I    KA     A ++Y +
Sbjct: 984  IIYNLLIDGLGKSERIEEAVCLFNEMKKKGIVPNLYTYNSLILHLGKAGKASEAAQMYEE 1043

Query: 526  MQNAGFEPDKVTYSIVME---VLGHC----------------------GYLDE-----AE 555
            +   G++P+  TY+ ++    V G                        G +DE     AE
Sbjct: 1044 LLIKGWKPNVFTYNALIRGYSVSGSTDNAYAAYDCVAVGVSLKTALISGLVDENLINIAE 1103

Query: 556  AVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQ 598
             +FAEM+R+   PD+  Y L++D  GK+  + +  +  E + +
Sbjct: 1104 GLFAEMKRRGCGPDQFTYNLILDAIGKSMRIEEMLKVQEEIAE 1146



 Score =  121 bits (303), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 80/303 (26%), Positives = 146/303 (48%), Gaps = 10/303 (3%)

Query: 350  LRRQA-----GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHS 404
            LR QA     G++    TY T++  L ++++      L   ++ +G  P   TY  L+  
Sbjct: 828  LRVQAEMHRKGYESTYVTYNTIISGLVKSKRLEQAIDLYYNLMSEGFSPTPCTYGPLLDG 887

Query: 405  YGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPD 464
              +A  + +A ++F +M   GC+P+   Y  L++ H  AG  +    +++KM   G++PD
Sbjct: 888  LLKAGKMVDAENLFNEMLEYGCKPNCTIYNILLNGHRIAGNTENVCQIFEKMVEQGINPD 947

Query: 465  TFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYR 524
              +Y+V+I+ L  AG L      F +++  G  P+L+ YN++I    K+   + A+ L+ 
Sbjct: 948  IKSYTVLIDTLCTAGRLNDGLSYFRQLLELGLEPDLIIYNLLIDGLGKSERIEEAVCLFN 1007

Query: 525  DMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAG 584
            +M+  G  P+  TY+ ++  LG  G   EA  ++ E+  K W P+   Y  L+  +  +G
Sbjct: 1008 EMKKKGIVPNLYTYNSLILHLGKAGKASEAAQMYEELLIKGWKPNVFTYNALIRGYSVSG 1067

Query: 585  NVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYT 644
            +   A+  Y+      +   V    +L+S  +    ++ A  L   M   G  P   TY 
Sbjct: 1068 STDNAYAAYDC-----VAVGVSLKTALISGLVDENLINIAEGLFAEMKRRGCGPDQFTYN 1122

Query: 645  LLL 647
            L+L
Sbjct: 1123 LIL 1125



 Score =  106 bits (264), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 108/465 (23%), Positives = 193/465 (41%), Gaps = 49/465 (10%)

Query: 362  TYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQM 421
            TY T++  L +  +      +L  M   GC P++ +YN +++   +     EA  +F QM
Sbjct: 600  TYNTVLDCLSKNGEVNCAIGMLYSMTEKGCTPDLSSYNTVMYGLIKEERFEEAFRMFCQM 659

Query: 422  QVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKK--MQAAGLSPDTFTYSVIINCLGKAG 479
            + +   PD  T CT++    K G +  A+   K+  ++A   +  +  +S++   L KAG
Sbjct: 660  KKI-LAPDYATLCTILPSFVKNGLMKEALHTVKEYILKADCNTDKSSFHSLMEGILNKAG 718

Query: 480  --------------------------------HLQA--AHQLFCEMVNQGCIPNLVTYNI 505
                                            H +A  AHQLF +    G      +YN 
Sbjct: 719  VEKSIEFAENIASRGILLNDFFLCPLIRHLCKHKKALEAHQLFNKFKGLGVSLKTGSYNS 778

Query: 506  MIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKN 565
            +I           A  L+ +M+  G  PD+ TY+++++ +G    ++E   V AEM RK 
Sbjct: 779  LIRGLVDENLIDIAEDLFTEMKRLGCGPDEFTYNLILDAMGKSMRIEEMLRVQAEMHRKG 838

Query: 566  WVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAY 625
            +      Y  ++    K+  + +A + Y  ++  G  P   T   LL   L+ G++ DA 
Sbjct: 839  YESTYVTYNTIISGLVKSKRLEQAIDLYYNLMSEGFSPTPCTYGPLLDGLLKAGKMVDAE 898

Query: 626  HLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGFCHELMAVSG-HPAHMFLLSMPSPG 684
            +L   ML  G KP+   Y +LL+    A +  ++    E M   G +P       +    
Sbjct: 899  NLFNEMLEYGCKPNCTIYNILLNGHRIAGNTENVCQIFEKMVEQGINPDIKSYTVLIDTL 958

Query: 685  PDGQNVRDHVGSFLEMMHSEDRESKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPD 744
                 + D +  F +++     E    + + ++D L KS   EEA  ++    +K + P+
Sbjct: 959  CTAGRLNDGLSYFRQLLEL-GLEPDLIIYNLLIDGLGKSERIEEAVCLFNEMKKKGIVPN 1017

Query: 745  AVKEKGMSYWLINLHVMSDGTAVIALSRTLAWFRKQMLISGVGPS 789
                   +Y  + LH+   G A  A     A   +++LI G  P+
Sbjct: 1018 LY-----TYNSLILHLGKAGKASEA-----AQMYEELLIKGWKPN 1052


>gi|297835244|ref|XP_002885504.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297331344|gb|EFH61763.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 618

 Score =  156 bits (395), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 109/380 (28%), Positives = 186/380 (48%), Gaps = 28/380 (7%)

Query: 295 GNVVESVSRILRQWKWGPLAEEAL-----------GNTNYSMDAY-------------QA 330
           G V E++  I R  K+G  A E             GNT  ++D +             Q 
Sbjct: 188 GRVTEALVLIDRMVKYGCEANEITYGPVLNRMCKSGNTALALDLFRKMEERSIKASVVQY 247

Query: 331 NQVLKQL-QDHTV--ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMV 387
           + V+  L +D  +  AL  FN +  + G K D   Y++++G L    ++    K+L +M+
Sbjct: 248 SIVIDSLCKDGNLDDALSLFNEMEMK-GIKADVVAYSSIIGGLCNDGRWDDGAKMLREMI 306

Query: 388 RDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLD 447
                PNVVT++ LI  + +   L EA +++ +M   G  PD +TY +LID   K   L 
Sbjct: 307 GRNIIPNVVTFSALIDVFVKEGKLLEAKELYNEMVARGIAPDTITYSSLIDGFCKENRLG 366

Query: 448 VAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMI 507
            A  M   M + G  P+  TYS++IN   KA  +    +LFCE+ ++G + + VTYN ++
Sbjct: 367 EANQMLDLMVSKGCEPNIVTYSILINSYCKAKRVDNGMRLFCEISSKGLVADTVTYNTLV 426

Query: 508 ALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWV 567
               ++     A +L+++M + G  P  VTY I+++ L   G L +A  +F +M++   +
Sbjct: 427 QGFCQSGKLNVAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELQKALEIFEKMQKSRMI 486

Query: 568 PDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHL 627
               +Y +++     A  V  AW  + ++   G++P+V T N ++    + G LS+A  L
Sbjct: 487 LGIGIYNIIIHGMCNASKVDDAWSLFCSLSVKGVKPDVLTYNVMIGGLCKKGSLSEADML 546

Query: 628 LQGMLNLGLKPSLQTYTLLL 647
            + M   G  PS  TY +L+
Sbjct: 547 FRKMKEDGCAPSDCTYNILI 566



 Score =  135 bits (341), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 88/328 (26%), Positives = 168/328 (51%), Gaps = 3/328 (0%)

Query: 338 QDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVT 397
           +++ + LGF   +    G +H+ +T   M+    R R+      ++ + ++ G +PN +T
Sbjct: 83  KEYDLVLGFCKEMDLN-GIEHNMYTMNIMINCFCRKRKLLFAFSVVGRALKFGFEPNTIT 141

Query: 398 YNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQ 457
           ++ LI+ +     ++EA+ +  +M  +   P+ VT  TLI+     G +  A+ +  +M 
Sbjct: 142 FSTLINGFCLEGRVSEAVALVDRMVEMKYRPNVVTVNTLINGLCLKGRVTEALVLIDRMV 201

Query: 458 AAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQ 517
             G   +  TY  ++N + K+G+   A  LF +M  +    ++V Y+I+I    K  N  
Sbjct: 202 KYGCEANEITYGPVLNRMCKSGNTALALDLFRKMEERSIKASVVQYSIVIDSLCKDGNLD 261

Query: 518 SALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLV 577
            AL L+ +M+  G + D V YS ++  L + G  D+   +  EM  +N +P+   +  L+
Sbjct: 262 DALSLFNEMEMKGIKADVVAYSSIIGGLCNDGRWDDGAKMLREMIGRNIIPNVVTFSALI 321

Query: 578 DLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLK 637
           D++ K G + +A E Y  M+  G+ P+  T +SL+  F +  +L +A  +L  M++ G +
Sbjct: 322 DVFVKEGKLLEAKELYNEMVARGIAPDTITYSSLIDGFCKENRLGEANQMLDLMVSKGCE 381

Query: 638 PSLQTYTLLL-SCCTEARSPYDMG-FCH 663
           P++ TY++L+ S C   R    M  FC 
Sbjct: 382 PNIVTYSILINSYCKAKRVDNGMRLFCE 409



 Score =  134 bits (338), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 78/271 (28%), Positives = 138/271 (50%), Gaps = 1/271 (0%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           G   D  TY++++    +  + G  N++LD MV  GC+PN+VTY+ LI+SY +A  ++  
Sbjct: 344 GIAPDTITYSSLIDGFCKENRLGEANQMLDLMVSKGCEPNIVTYSILINSYCKAKRVDNG 403

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
           + +F ++   G   D VTY TL+    ++G L+VA +++++M + G+ P   TY ++++ 
Sbjct: 404 MRLFCEISSKGLVADTVTYNTLVQGFCQSGKLNVAKELFQEMVSRGVPPSVVTYGILLDG 463

Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPD 534
           L   G LQ A ++F +M     I  +  YNI+I     A     A  L+  +   G +PD
Sbjct: 464 LCDNGELQKALEIFEKMQKSRMILGIGIYNIIIHGMCNASKVDDAWSLFCSLSVKGVKPD 523

Query: 535 KVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYE 594
            +TY++++  L   G L EA+ +F +M+     P +  Y +L+        V  + E  E
Sbjct: 524 VLTYNVMIGGLCKKGSLSEADMLFRKMKEDGCAPSDCTYNILIRAHLGGSGVISSVELIE 583

Query: 595 AMLQAGLRPNVPTCNSLLSAFLRVGQLSDAY 625
            M   G   +  T   ++   L  G+L   +
Sbjct: 584 EMKMRGFAADASTI-KMVVVMLSDGRLDKTF 613



 Score =  134 bits (336), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 94/329 (28%), Positives = 157/329 (47%), Gaps = 37/329 (11%)

Query: 355 GFKHDEHTYTTMV-GILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNE 413
           GF+ +  T++T++ G     R   A+  L+D+MV    +PNVVT N LI+       + E
Sbjct: 134 GFEPNTITFSTLINGFCLEGRVSEAV-ALVDRMVEMKYRPNVVTVNTLINGLCLKGRVTE 192

Query: 414 ALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIIN 473
           AL +  +M   GCE + +TY  +++   K+G   +A+D+++KM+   +      YS++I+
Sbjct: 193 ALVLIDRMVKYGCEANEITYGPVLNRMCKSGNTALALDLFRKMEERSIKASVVQYSIVID 252

Query: 474 CLGKAGHLQAAHQLF----------------------C-------------EMVNQGCIP 498
            L K G+L  A  LF                      C             EM+ +  IP
Sbjct: 253 SLCKDGNLDDALSLFNEMEMKGIKADVVAYSSIIGGLCNDGRWDDGAKMLREMIGRNIIP 312

Query: 499 NLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVF 558
           N+VT++ +I +  K      A +LY +M   G  PD +TYS +++       L EA  + 
Sbjct: 313 NVVTFSALIDVFVKEGKLLEAKELYNEMVARGIAPDTITYSSLIDGFCKENRLGEANQML 372

Query: 559 AEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRV 618
             M  K   P+   Y +L++ + KA  V      +  +   GL  +  T N+L+  F + 
Sbjct: 373 DLMVSKGCEPNIVTYSILINSYCKAKRVDNGMRLFCEISSKGLVADTVTYNTLVQGFCQS 432

Query: 619 GQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
           G+L+ A  L Q M++ G+ PS+ TY +LL
Sbjct: 433 GKLNVAKELFQEMVSRGVPPSVVTYGILL 461



 Score =  129 bits (323), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 78/293 (26%), Positives = 148/293 (50%)

Query: 362 TYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQM 421
           T++ ++ +  +  +     +L ++MV  G  P+ +TY+ LI  + + N L EA  +   M
Sbjct: 316 TFSALIDVFVKEGKLLEAKELYNEMVARGIAPDTITYSSLIDGFCKENRLGEANQMLDLM 375

Query: 422 QVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHL 481
              GCEP+ VTY  LI+ + KA  +D  M ++ ++ + GL  DT TY+ ++    ++G L
Sbjct: 376 VSKGCEPNIVTYSILINSYCKAKRVDNGMRLFCEISSKGLVADTVTYNTLVQGFCQSGKL 435

Query: 482 QAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIV 541
             A +LF EMV++G  P++VTY I++         Q AL+++  MQ +        Y+I+
Sbjct: 436 NVAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELQKALEIFEKMQKSRMILGIGIYNII 495

Query: 542 MEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGL 601
           +  + +   +D+A ++F  +  K   PD   Y +++    K G++ +A   +  M + G 
Sbjct: 496 IHGMCNASKVDDAWSLFCSLSVKGVKPDVLTYNVMIGGLCKKGSLSEADMLFRKMKEDGC 555

Query: 602 RPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEAR 654
            P+  T N L+ A L    +  +  L++ M   G      T  +++   ++ R
Sbjct: 556 APSDCTYNILIRAHLGGSGVISSVELIEEMKMRGFAADASTIKMVVVMLSDGR 608


>gi|115471383|ref|NP_001059290.1| Os07g0249100 [Oryza sativa Japonica Group]
 gi|33146978|dbj|BAC80051.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|50508482|dbj|BAD30659.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|113610826|dbj|BAF21204.1| Os07g0249100 [Oryza sativa Japonica Group]
 gi|215767773|dbj|BAH00002.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 882

 Score =  156 bits (395), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 117/444 (26%), Positives = 199/444 (44%), Gaps = 49/444 (11%)

Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLI 402
           AL  F  +++ A  + +  TY  ++ +L    +     ++LD+M      PN++T N ++
Sbjct: 373 ALSLFEVMKKDA--EPNSSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMV 430

Query: 403 HSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLS 462
               +A  L EA  +F+     GC PD VTYC+LID   K G +D A  +++KM  AG +
Sbjct: 431 DRLCKARKLEEAYKIFESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHN 490

Query: 463 PDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKL 522
            +   Y+ +I      G  +  H++F E++ +GC P+L   N  +    KA   +    +
Sbjct: 491 ANPVVYTSLIRNFFIHGRKEDGHKIFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMI 550

Query: 523 YRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGK 582
           + D+++ GF PD  +YSI++  L   G   E   +F  M+++ +  D   Y  +VD + K
Sbjct: 551 FEDIRSYGFLPDVRSYSILIHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCK 610

Query: 583 AGNVRKAWEWYEAMLQAGLRPNVPT----------------------------------- 607
           +G V KA+E  E M +  ++P V T                                   
Sbjct: 611 SGKVHKAYEILEEMKEKCVQPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVL 670

Query: 608 CNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGFCHELMA 667
            +SL+  F +VG++ +AY +L+ M+  GL P++ T+  LL    +A    +   C + M 
Sbjct: 671 YSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMK 730

Query: 668 VSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRESKRGLVDAVVDF------LH 721
               P + +  S+   G       +    F + M       K+GLV  VV +      L 
Sbjct: 731 EMKCPPNTYTYSILINGLCRVQKYNKAFVFWQDMQ------KQGLVPNVVTYTTMISGLA 784

Query: 722 KSGLKEEAGSVWEVAAQKNVYPDA 745
           K G   +A S++E        PDA
Sbjct: 785 KVGNITDAYSLFERFKANGGIPDA 808



 Score =  147 bits (370), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 90/313 (28%), Positives = 155/313 (49%), Gaps = 5/313 (1%)

Query: 335 KQLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPN 394
           ++L D  +A+     L+ +  F      YT ++G L  AR+     +LL QM   G +  
Sbjct: 158 RRLDDAVLAVAVMRRLKFRPAFS----AYTVLIGALAEARRPERALELLRQMQEVGYEVG 213

Query: 395 VVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYK 454
           V  +  L+ +  R   + +AL +  +++    EPD V Y   ID   KAG +D+A   + 
Sbjct: 214 VHLFTTLVRALAREGQVADALALVDEVKGSCLEPDIVLYNVCIDCFGKAGNVDMAWKFFH 273

Query: 455 KMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKAR 514
           +++A GL PD  +Y+ +I  L KAG L  A +LF +M  +  +P    YN MI     A 
Sbjct: 274 ELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIMGYGSAG 333

Query: 515 NYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYG 574
            ++ A KL   ++  G  P  V+++ ++  LG    +DEA ++F E+ +K+  P+   Y 
Sbjct: 334 RFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLF-EVMKKDAEPNSSTYN 392

Query: 575 LLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNL 634
           +++D+    G V +A+   + M  A L PN+ T N ++    +  +L +AY + +     
Sbjct: 393 IIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESASQR 452

Query: 635 GLKPSLQTYTLLL 647
           G  P   TY  L+
Sbjct: 453 GCNPDCVTYCSLI 465



 Score =  146 bits (368), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 100/405 (24%), Positives = 190/405 (46%), Gaps = 2/405 (0%)

Query: 342 VALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRL 401
           +A  FF+ L+ Q G K D+ +YT+M+ +L +A + G   +L  QM  +   P    YN +
Sbjct: 267 MAWKFFHELKAQ-GLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTM 325

Query: 402 IHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGL 461
           I  YG A    +A  + ++++  GC P  V++ +++    K   +D A+ +++ M+    
Sbjct: 326 IMGYGSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLFEVMKKDA- 384

Query: 462 SPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALK 521
            P++ TY++II+ L   G ++ A+++  EM +    PNL+T NIM+    KAR  + A K
Sbjct: 385 EPNSSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYK 444

Query: 522 LYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWG 581
           ++      G  PD VTY  +++ LG  G +DEA  +F +M       +  VY  L+  + 
Sbjct: 445 IFESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFF 504

Query: 582 KAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQ 641
             G      + ++ +++ G +P++   N+ +    + G++     + + + + G  P ++
Sbjct: 505 IHGRKEDGHKIFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVR 564

Query: 642 TYTLLLSCCTEARSPYDMGFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMM 701
           +Y++L+   T+A    +       M   G        +    G             LE M
Sbjct: 565 SYSILIHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEM 624

Query: 702 HSEDRESKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAV 746
             +  +       A+VD L K    +EA  ++E A  K +  + V
Sbjct: 625 KEKCVQPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVV 669



 Score =  135 bits (340), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 74/264 (28%), Positives = 132/264 (50%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           +Q GF  D   Y  +V    ++ +     ++L++M     QP V TY  ++    + + L
Sbjct: 590 KQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGAIVDGLAKIDRL 649

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
           +EA  +F++ +  G E + V Y +LID   K G +D A  + ++M   GL+P+ +T++ +
Sbjct: 650 DEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSL 709

Query: 472 INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF 531
           ++ L KA  +  A   F  M    C PN  TY+I+I    + + Y  A   ++DMQ  G 
Sbjct: 710 LDALVKAEEINEALVCFQSMKEMKCPPNTYTYSILINGLCRVQKYNKAFVFWQDMQKQGL 769

Query: 532 EPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWE 591
            P+ VTY+ ++  L   G + +A ++F   +    +PD   +  L++    A    +A++
Sbjct: 770 VPNVVTYTTMISGLAKVGNITDAYSLFERFKANGGIPDAASFNALIEGMSNANRAMEAYQ 829

Query: 592 WYEAMLQAGLRPNVPTCNSLLSAF 615
            +E     G R N+ +C SLL A 
Sbjct: 830 VFEETRLRGCRINIKSCISLLDAL 853



 Score =  115 bits (288), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 68/296 (22%), Positives = 144/296 (48%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           R  GF  D  +Y+ ++  L +A Q    + +   M + G   +   YN ++  + ++  +
Sbjct: 555 RSYGFLPDVRSYSILIHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKV 614

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
           ++A ++ ++M+    +P   TY  ++D  AK   LD A  ++++ ++ G+  +   YS +
Sbjct: 615 HKAYEILEEMKEKCVQPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSL 674

Query: 472 INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF 531
           I+  GK G +  A+ +  EM+ +G  PN+ T+N ++    KA     AL  ++ M+    
Sbjct: 675 IDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKEMKC 734

Query: 532 EPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWE 591
            P+  TYSI++  L      ++A   + +M+++  VP+   Y  ++    K GN+  A+ 
Sbjct: 735 PPNTYTYSILINGLCRVQKYNKAFVFWQDMQKQGLVPNVVTYTTMISGLAKVGNITDAYS 794

Query: 592 WYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
            +E     G  P+  + N+L+       +  +AY + +     G + ++++   LL
Sbjct: 795 LFERFKANGGIPDAASFNALIEGMSNANRAMEAYQVFEETRLRGCRINIKSCISLL 850



 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 76/302 (25%), Positives = 140/302 (46%), Gaps = 2/302 (0%)

Query: 346 FFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSY 405
           F   +RR  G K D     T +  + +A +      + + +   G  P+V +Y+ LIH  
Sbjct: 516 FKELIRR--GCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGL 573

Query: 406 GRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDT 465
            +A    E  ++F  M+  G   D   Y  ++D   K+G +  A ++ ++M+   + P  
Sbjct: 574 TKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTV 633

Query: 466 FTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRD 525
            TY  I++ L K   L  A+ LF E  ++G   N+V Y+ +I    K      A  +  +
Sbjct: 634 ATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEE 693

Query: 526 MQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGN 585
           M   G  P+  T++ +++ L     ++EA   F  M+     P+   Y +L++   +   
Sbjct: 694 MMKKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKEMKCPPNTYTYSILINGLCRVQK 753

Query: 586 VRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTL 645
             KA+ +++ M + GL PNV T  +++S   +VG ++DAY L +     G  P   ++  
Sbjct: 754 YNKAFVFWQDMQKQGLVPNVVTYTTMISGLAKVGNITDAYSLFERFKANGGIPDAASFNA 813

Query: 646 LL 647
           L+
Sbjct: 814 LI 815



 Score =  107 bits (266), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 93/374 (24%), Positives = 169/374 (45%), Gaps = 42/374 (11%)

Query: 376 FGAINKLLDQMVRDGC-QPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYC 434
             A+ K+L++M   G   PN    + L  +  RA  L++A+     M+ +   P    Y 
Sbjct: 125 LAALEKVLEEMAVLGYGLPNQACAH-LAAALVRARRLDDAVLAVAVMRRLKFRPAFSAYT 183

Query: 435 TLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQ 494
            LI   A+A   + A+++ ++MQ  G       ++ ++  L + G +  A  L  E+   
Sbjct: 184 VLIGALAEARRPERALELLRQMQEVGYEVGVHLFTTLVRALAREGQVADALALVDEVKGS 243

Query: 495 GCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEA 554
              P++V YN+ I    KA N   A K + +++  G +PD V+Y+ ++ VL   G L EA
Sbjct: 244 CLEPDIVLYNVCIDCFGKAGNVDMAWKFFHELKAQGLKPDDVSYTSMIWVLCKAGRLGEA 303

Query: 555 EAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSA 614
           E +FA+M  +  VP    Y  ++  +G AG    A++  E + + G  P+V + NS+L+ 
Sbjct: 304 EELFAQMEAERSVPCAYAYNTMIMGYGSAGRFEDAYKLLERLRERGCIPSVVSFNSILTC 363

Query: 615 FLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGFCHELMAVSG--HP 672
             +  ++ +A  L + M     +P+  TY +++                +++ + G    
Sbjct: 364 LGKKRKVDEALSLFEVM-KKDAEPNSSTYNIII----------------DMLCLGGRVEE 406

Query: 673 AHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRESKRGLVDAVVDFLHKSGLKEEAGSV 732
           A+  L  M           +H   F  ++           V+ +VD L K+   EEA  +
Sbjct: 407 AYRILDEM-----------EHASLFPNLLT----------VNIMVDRLCKARKLEEAYKI 445

Query: 733 WEVAAQKNVYPDAV 746
           +E A+Q+   PD V
Sbjct: 446 FESASQRGCNPDCV 459



 Score = 92.4 bits (228), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 54/211 (25%), Positives = 107/211 (50%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           +  G + +   Y++++   G+  +      +L++M++ G  PNV T+N L+ +  +A  +
Sbjct: 660 KSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLLDALVKAEEI 719

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
           NEAL  F+ M+ + C P+  TY  LI+   +    + A   ++ MQ  GL P+  TY+ +
Sbjct: 720 NEALVCFQSMKEMKCPPNTYTYSILINGLCRVQKYNKAFVFWQDMQKQGLVPNVVTYTTM 779

Query: 472 INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF 531
           I+ L K G++  A+ LF      G IP+  ++N +I   + A     A +++ + +  G 
Sbjct: 780 ISGLAKVGNITDAYSLFERFKANGGIPDAASFNALIEGMSNANRAMEAYQVFEETRLRGC 839

Query: 532 EPDKVTYSIVMEVLGHCGYLDEAEAVFAEMR 562
             +  +   +++ L     L++A  V A +R
Sbjct: 840 RINIKSCISLLDALNKSECLEQAAIVGAVLR 870


>gi|255660860|gb|ACU25599.1| pentatricopeptide repeat-containing protein [Petrea racemosa]
          Length = 418

 Score =  156 bits (395), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 89/279 (31%), Positives = 149/279 (53%)

Query: 370 LGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPD 429
           L + + F  +     +++  G   ++  +N L+H + +   +  A  VF  +   G  P 
Sbjct: 111 LMKXKYFKLVWGFYKEILECGYPASLYFFNILMHRFCKEGEMRLAQSVFDAITKWGLRPS 170

Query: 430 RVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFC 489
            V++ TL++ + K G LD    +   M+A+G+ PD +TYSV+IN L K   +  A+ LF 
Sbjct: 171 VVSFNTLMNGYIKLGDLDEGFRLKNAMRASGVQPDVYTYSVLINGLCKESRMDEANGLFG 230

Query: 490 EMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCG 549
           EM++ G +PN VT+  +I    K      A+ +YR M N GF PD VTY+ ++  L   G
Sbjct: 231 EMLDNGLVPNGVTFTTLIDGHCKNGRLDLAMDIYRQMLNQGFSPDVVTYNTLIYGLCKKG 290

Query: 550 YLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCN 609
            L +A  +  EM RK   PD+  Y  L+D   K G++  A+E  E M++  +R +     
Sbjct: 291 DLKQARYLLDEMSRKGLKPDKITYTTLIDGSCKEGDLETAFELRERMIKESIRLDDVVYT 350

Query: 610 SLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
           +L+    + G+  DA  +L+ ML +GLKP  +TYT++++
Sbjct: 351 ALIFGLCQEGRAVDAEKMLREMLRVGLKPDDETYTMIMN 389



 Score =  134 bits (338), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 80/227 (35%), Positives = 122/227 (53%)

Query: 381 KLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIH 440
           +L + M   G QP+V TY+ LI+   + + ++EA  +F +M   G  P+ VT+ TLID H
Sbjct: 192 RLKNAMRASGVQPDVYTYSVLINGLCKESRMDEANGLFGEMLDNGLVPNGVTFTTLIDGH 251

Query: 441 AKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNL 500
            K G LD+AMD+Y++M   G SPD  TY+ +I  L K G L+ A  L  EM  +G  P+ 
Sbjct: 252 CKNGRLDLAMDIYRQMLNQGFSPDVVTYNTLIYGLCKKGDLKQARYLLDEMSRKGLKPDK 311

Query: 501 VTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAE 560
           +TY  +I    K  + ++A +L   M       D V Y+ ++  L   G   +AE +  E
Sbjct: 312 ITYTTLIDGSCKEGDLETAFELRERMIKESIRLDDVVYTALIFGLCQEGRAVDAEKMLRE 371

Query: 561 MRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPT 607
           M R    PD+  Y ++++ + K G+V+KA E    M + G  P V T
Sbjct: 372 MLRVGLKPDDETYTMIMNEFCKKGDVKKASELLREMQRNGRVPCVVT 418



 Score =  123 bits (308), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 78/263 (29%), Positives = 137/263 (52%), Gaps = 4/263 (1%)

Query: 382 LLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHA 441
           + D + + G +P+VV++N L++ Y +   L+E   +   M+  G +PD  TY  LI+   
Sbjct: 158 VFDAITKWGLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMRASGVQPDVYTYSVLINGLC 217

Query: 442 KAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLV 501
           K   +D A  ++ +M   GL P+  T++ +I+   K G L  A  ++ +M+NQG  P++V
Sbjct: 218 KESRMDEANGLFGEMLDNGLVPNGVTFTTLIDGHCKNGRLDLAMDIYRQMLNQGFSPDVV 277

Query: 502 TYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHC--GYLDEAEAVFA 559
           TYN +I    K  + + A  L  +M   G +PDK+TY+ +++  G C  G L+ A  +  
Sbjct: 278 TYNTLIYGLCKKGDLKQARYLLDEMSRKGLKPDKITYTTLID--GSCKEGDLETAFELRE 335

Query: 560 EMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVG 619
            M +++   D+ VY  L+    + G    A +    ML+ GL+P+  T   +++ F + G
Sbjct: 336 RMIKESIRLDDVVYTALIFGLCQEGRAVDAEKMLREMLRVGLKPDDETYTMIMNEFCKKG 395

Query: 620 QLSDAYHLLQGMLNLGLKPSLQT 642
            +  A  LL+ M   G  P + T
Sbjct: 396 DVKKASELLREMQRNGRVPCVVT 418



 Score =  112 bits (280), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 87/303 (28%), Positives = 139/303 (45%), Gaps = 16/303 (5%)

Query: 271 FSKPSREMKIPAGLAPFS---RHFASTGN--VVESVSRILRQWKWGPLAEEALGNTNYSM 325
           F K   E   PA L  F+     F   G   + +SV   + +W   P    ++ + N  M
Sbjct: 123 FYKEILECGYPASLYFFNILMHRFCKEGEMRLAQSVFDAITKWGLRP----SVVSFNTLM 178

Query: 326 DAYQANQVLKQLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQ 385
           + Y       +L D        N +R  +G + D +TY+ ++  L +  +    N L  +
Sbjct: 179 NGYI------KLGDLDEGFRLKNAMR-ASGVQPDVYTYSVLINGLCKESRMDEANGLFGE 231

Query: 386 MVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGF 445
           M+ +G  PN VT+  LI  + +   L+ A+D+++QM   G  PD VTY TLI    K G 
Sbjct: 232 MLDNGLVPNGVTFTTLIDGHCKNGRLDLAMDIYRQMLNQGFSPDVVTYNTLIYGLCKKGD 291

Query: 446 LDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNI 505
           L  A  +  +M   GL PD  TY+ +I+   K G L+ A +L   M+ +    + V Y  
Sbjct: 292 LKQARYLLDEMSRKGLKPDKITYTTLIDGSCKEGDLETAFELRERMIKESIRLDDVVYTA 351

Query: 506 MIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKN 565
           +I    +      A K+ R+M   G +PD  TY+++M      G + +A  +  EM+R  
Sbjct: 352 LIFGLCQEGRAVDAEKMLREMLRVGLKPDDETYTMIMNEFCKKGDVKKASELLREMQRNG 411

Query: 566 WVP 568
            VP
Sbjct: 412 RVP 414



 Score = 73.6 bits (179), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 50/176 (28%), Positives = 78/176 (44%), Gaps = 35/176 (19%)

Query: 362 TYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQM 421
           T+TT++    +  +      +  QM+  G  P+VVTYN LI+   +   L +A  +  +M
Sbjct: 243 TFTTLIDGHCKNGRLDLAMDIYRQMLNQGFSPDVVTYNTLIYGLCKKGDLKQARYLLDEM 302

Query: 422 QVVGCEPDRVTYCTLIDIHAKAGFLDVAMD------------------------------ 451
              G +PD++TY TLID   K G L+ A +                              
Sbjct: 303 SRKGLKPDKITYTTLIDGSCKEGDLETAFELRERMIKESIRLDDVVYTALIFGLCQEGRA 362

Query: 452 -----MYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVT 502
                M ++M   GL PD  TY++I+N   K G ++ A +L  EM   G +P +VT
Sbjct: 363 VDAEKMLREMLRVGLKPDDETYTMIMNEFCKKGDVKKASELLREMQRNGRVPCVVT 418



 Score = 65.9 bits (159), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 64/299 (21%), Positives = 119/299 (39%), Gaps = 20/299 (6%)

Query: 357 KHDEHTYTTMVGILGRARQFGAINKLLDQMV-RDGCQPNVVTYNRLIHSYGRANYLNEAL 415
           +H   +Y TM+  L   + F     L+  +V R G       +  ++ + G         
Sbjct: 10  RHTLQSYCTMIHFLCTHQMFLEAKSLIQTVVSRKGKDSASAVFAAILETKGTQR------ 63

Query: 416 DVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCL 475
                        D   +  LI  + ++GF+  A++ ++  +         T   ++  L
Sbjct: 64  ------------SDIYVFSGLITAYLESGFIRDAIECFRLTKKHSFRVPFDTCRNVLEHL 111

Query: 476 GKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDK 535
            K  + +     + E++  G   +L  +NI++    K    + A  ++  +   G  P  
Sbjct: 112 MKXKYFKLVWGFYKEILECGYPASLYFFNILMHRFCKEGEMRLAQSVFDAITKWGLRPSV 171

Query: 536 VTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEA 595
           V+++ +M      G LDE   +   MR     PD   Y +L++   K   + +A   +  
Sbjct: 172 VSFNTLMNGYIKLGDLDEGFRLKNAMRASGVQPDVYTYSVLINGLCKESRMDEANGLFGE 231

Query: 596 MLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTY-TLLLSCCTEA 653
           ML  GL PN  T  +L+    + G+L  A  + + MLN G  P + TY TL+   C + 
Sbjct: 232 MLDNGLVPNGVTFTTLIDGHCKNGRLDLAMDIYRQMLNQGFSPDVVTYNTLIYGLCKKG 290


>gi|242050480|ref|XP_002462984.1| hypothetical protein SORBIDRAFT_02g035800 [Sorghum bicolor]
 gi|241926361|gb|EER99505.1| hypothetical protein SORBIDRAFT_02g035800 [Sorghum bicolor]
          Length = 668

 Score =  156 bits (395), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 94/318 (29%), Positives = 152/318 (47%)

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
           Q G   DE TY+ +V    RA ++ +   LL +M  DG +P+   ++R++  +       
Sbjct: 327 QCGVAPDEATYSLLVDAYTRAGRWESARILLKEMEADGVKPSSYVFSRILAGFRDRGDWQ 386

Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
           +A  V ++MQ  G  PDR  Y  +ID   K   L  AMD + +M+   + PD  T++ +I
Sbjct: 387 KAFAVLREMQASGVRPDRHFYNVMIDTFGKYNCLGHAMDAFDRMREEEIEPDVVTWNTLI 446

Query: 473 NCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFE 532
           +   K G    A +LF EM    C P   TYNIMI L  +   ++    +  +M+  G  
Sbjct: 447 DAHCKGGRHDRAMELFEEMRESNCPPGTTTYNIMINLLGEQERWEGVEAMLSEMKEQGLV 506

Query: 533 PDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEW 592
           P+ +TY+ +++V G  G   EA      M+     P   +Y  LV+ + + G    A   
Sbjct: 507 PNIITYTTLVDVYGRSGRYKEAIDCIEAMKADGLKPSPTMYHALVNAYAQRGLADHALNV 566

Query: 593 YEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTE 652
            +AM   GL  ++   NSL++AF    ++ +A+ +LQ M   GL+P + TYT L+     
Sbjct: 567 VKAMKADGLEVSILVLNSLINAFGEDRRVVEAFSVLQFMKENGLRPDVITYTTLMKALIR 626

Query: 653 ARSPYDMGFCHELMAVSG 670
                 +   +E M  SG
Sbjct: 627 VEQFDKVPVIYEEMITSG 644



 Score =  134 bits (338), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 114/472 (24%), Positives = 195/472 (41%), Gaps = 71/472 (15%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDG-CQPNVVTYNRLIHSYGRANYLNE 413
           G     +  T ++  LG A +      L  +    G  +P    YN L+  Y R   L  
Sbjct: 258 GLTPRSNAVTALISALGSAGRVAEAEALFLEFFLAGEIKPRTRAYNALLKGYVRIGSLKN 317

Query: 414 ALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIIN 473
           A  V  +M   G  PD  TY  L+D + +AG  + A  + K+M+A G+ P ++ +S I+ 
Sbjct: 318 AEQVLDEMSQCGVAPDEATYSLLVDAYTRAGRWESARILLKEMEADGVKPSSYVFSRILA 377

Query: 474 CLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEP 533
                G  Q A  +  EM   G  P+   YN+MI    K      A+  +  M+    EP
Sbjct: 378 GFRDRGDWQKAFAVLREMQASGVRPDRHFYNVMIDTFGKYNCLGHAMDAFDRMREEEIEP 437

Query: 534 DKVTYSIVMEVLGHC--GYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWE 591
           D VT++ +++   HC  G  D A  +F EMR  N  P    Y ++++L G+    ++ WE
Sbjct: 438 DVVTWNTLID--AHCKGGRHDRAMELFEEMRESNCPPGTTTYNIMINLLGE----QERWE 491

Query: 592 WYEAML----QAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
             EAML    + GL PN+ T  +L+  + R G+  +A   ++ M   GLKPS   Y  L+
Sbjct: 492 GVEAMLSEMKEQGLVPNIITYTTLVDVYGRSGRYKEAIDCIEAMKADGLKPSPTMYHALV 551

Query: 648 SCCTEARSPYDMGFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRE 707
           +   +                                   + + DH  + ++ M ++  E
Sbjct: 552 NAYAQ-----------------------------------RGLADHALNVVKAMKADGLE 576

Query: 708 SKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAVKEKGMSYWLINLHVMSDGTAV 767
               +++++++   +     EA SV +   +  + PD +    +   LI +    D   V
Sbjct: 577 VSILVLNSLINAFGEDRRVVEAFSVLQFMKENGLRPDVITYTTLMKALIRVEQF-DKVPV 635

Query: 768 IALSRTLAWFRKQMLISGVGPSRIDIVTGWGRRSRVTGTSLVRQAVQELLHM 819
           I          ++M+ SG  P R                +++R A++ + HM
Sbjct: 636 I---------YEEMITSGCAPDR-------------KARAMLRSALRYMKHM 665



 Score =  109 bits (272), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 75/307 (24%), Positives = 141/307 (45%), Gaps = 4/307 (1%)

Query: 350 LRRQAGFKHDEHTYTTMVGILGRARQ---FGAINKLLDQMVRDGCQPNVVTYNRLIHSYG 406
           L R+  F  D  +Y+ ++  L   R       + +LL  +     +P+   ++ LI ++ 
Sbjct: 180 LLREHDFLPDLASYSHLLASLLNTRDPPDAALLERLLGDLRESRLEPDAPLFSDLISAFA 239

Query: 407 RANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAG-LSPDT 465
           RA   + AL++    Q +G  P       LI     AG +  A  ++ +   AG + P T
Sbjct: 240 RAALPDAALELLASAQAIGLTPRSNAVTALISALGSAGRVAEAEALFLEFFLAGEIKPRT 299

Query: 466 FTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRD 525
             Y+ ++    + G L+ A Q+  EM   G  P+  TY++++    +A  ++SA  L ++
Sbjct: 300 RAYNALLKGYVRIGSLKNAEQVLDEMSQCGVAPDEATYSLLVDAYTRAGRWESARILLKE 359

Query: 526 MQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGN 585
           M+  G +P    +S ++      G   +A AV  EM+     PD   Y +++D +GK   
Sbjct: 360 MEADGVKPSSYVFSRILAGFRDRGDWQKAFAVLREMQASGVRPDRHFYNVMIDTFGKYNC 419

Query: 586 VRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTL 645
           +  A + ++ M +  + P+V T N+L+ A  + G+   A  L + M      P   TY +
Sbjct: 420 LGHAMDAFDRMREEEIEPDVVTWNTLIDAHCKGGRHDRAMELFEEMRESNCPPGTTTYNI 479

Query: 646 LLSCCTE 652
           +++   E
Sbjct: 480 MINLLGE 486



 Score =  101 bits (252), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 82/370 (22%), Positives = 162/370 (43%), Gaps = 18/370 (4%)

Query: 237 VQPRSKAHSNRLNSNFKSNLQPSDAKVVECVSERFSKPSREMKIPAGLAPFSRHFASTGN 296
           ++PR++A+    N+  K  ++    K  E V +  S+         G+AP     A+   
Sbjct: 295 IKPRTRAY----NALLKGYVRIGSLKNAEQVLDEMSQ--------CGVAPDE---ATYSL 339

Query: 297 VVESVSRILRQWKWGPLAEEALGNTNYSMDAYQANQVLKQLQDHTVALGFFNWLR--RQA 354
           +V++ +R  R W+   +  + +        +Y  +++L   +D       F  LR  + +
Sbjct: 340 LVDAYTRAGR-WESARILLKEMEADGVKPSSYVFSRILAGFRDRGDWQKAFAVLREMQAS 398

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           G + D H Y  M+   G+    G      D+M  +  +P+VVT+N LI ++ +    + A
Sbjct: 399 GVRPDRHFYNVMIDTFGKYNCLGHAMDAFDRMREEEIEPDVVTWNTLIDAHCKGGRHDRA 458

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
           +++F++M+   C P   TY  +I++  +    +    M  +M+  GL P+  TY+ +++ 
Sbjct: 459 MELFEEMRESNCPPGTTTYNIMINLLGEQERWEGVEAMLSEMKEQGLVPNIITYTTLVDV 518

Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPD 534
            G++G  + A      M   G  P+   Y+ ++   A+      AL + + M+  G E  
Sbjct: 519 YGRSGRYKEAIDCIEAMKADGLKPSPTMYHALVNAYAQRGLADHALNVVKAMKADGLEVS 578

Query: 535 KVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYE 594
            +  + ++   G    + EA +V   M+     PD   Y  L+    +     K    YE
Sbjct: 579 ILVLNSLINAFGEDRRVVEAFSVLQFMKENGLRPDVITYTTLMKALIRVEQFDKVPVIYE 638

Query: 595 AMLQAGLRPN 604
            M+ +G  P+
Sbjct: 639 EMITSGCAPD 648



 Score = 63.2 bits (152), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 44/172 (25%), Positives = 75/172 (43%), Gaps = 4/172 (2%)

Query: 486 QLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYR---DMQNAGFEPDKVTYSIVM 542
           +L   +     +P+L +Y+ ++A     R+   A  L R   D++ +  EPD   +S ++
Sbjct: 176 RLLSLLREHDFLPDLASYSHLLASLLNTRDPPDAALLERLLGDLRESRLEPDAPLFSDLI 235

Query: 543 EVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAG-L 601
                    D A  + A  +     P       L+   G AG V +A   +     AG +
Sbjct: 236 SAFARAALPDAALELLASAQAIGLTPRSNAVTALISALGSAGRVAEAEALFLEFFLAGEI 295

Query: 602 RPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEA 653
           +P     N+LL  ++R+G L +A  +L  M   G+ P   TY+LL+   T A
Sbjct: 296 KPRTRAYNALLKGYVRIGSLKNAEQVLDEMSQCGVAPDEATYSLLVDAYTRA 347



 Score = 53.9 bits (128), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 37/168 (22%), Positives = 71/168 (42%), Gaps = 35/168 (20%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           ++ G   +  TYTT+V + GR+ ++      ++ M  DG +P+   Y+ L+++Y +    
Sbjct: 501 KEQGLVPNIITYTTLVDVYGRSGRYKEAIDCIEAMKADGLKPSPTMYHALVNAYAQRGLA 560

Query: 412 NEALDVFKQMQVVGCE-----------------------------------PDRVTYCTL 436
           + AL+V K M+  G E                                   PD +TY TL
Sbjct: 561 DHALNVVKAMKADGLEVSILVLNSLINAFGEDRRVVEAFSVLQFMKENGLRPDVITYTTL 620

Query: 437 IDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAA 484
           +    +    D    +Y++M  +G +PD    +++ + L    H++ A
Sbjct: 621 MKALIRVEQFDKVPVIYEEMITSGCAPDRKARAMLRSALRYMKHMRVA 668


>gi|222612845|gb|EEE50977.1| hypothetical protein OsJ_31558 [Oryza sativa Japonica Group]
          Length = 1263

 Score =  156 bits (395), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 96/334 (28%), Positives = 166/334 (49%), Gaps = 2/334 (0%)

Query: 316  EALGNTNYSMDAYQANQVLKQLQDHTVALGFFNWLRRQAGFKHDEHT--YTTMVGILGRA 373
            E + ++  ++D +    ++K L     AL     +++   F     T  Y +++  L   
Sbjct: 834  EIIASSGITLDDFFLCPLIKHLCKQKKALEAHELVKKFKSFGVSLKTGLYNSLICGLVDE 893

Query: 374  RQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTY 433
                    L  +M   GC P+  TYN L+ + G++  + E L V ++M   G E   VTY
Sbjct: 894  NLIDIAEGLFAEMKELGCGPDEFTYNLLLDAMGKSMRIEEMLKVQEEMHRKGYESTYVTY 953

Query: 434  CTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVN 493
             T+I    K+  L+ A+D+Y  + + G SP   TY  +++ L KAG ++ A  LF EM+ 
Sbjct: 954  NTIISGLVKSRRLEQAIDLYYNLMSQGFSPTPCTYGPLLDGLLKAGRIEDAENLFNEMLE 1013

Query: 494  QGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDE 553
             GC  N   YNI++     A N +    L++DM + G  PD  +Y+I+++ L   G L++
Sbjct: 1014 YGCKANCTIYNILLNGHRIAGNTEKVCHLFQDMVDQGINPDIKSYTIIIDTLCKAGQLND 1073

Query: 554  AEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLS 613
                F ++      PD   Y LL+D  GK+  + +A   +  M + G+ PN+ T NSL+ 
Sbjct: 1074 GLTYFRQLLEMGLEPDLITYNLLIDGLGKSKRLEEAVSLFNEMQKKGIVPNLYTYNSLIL 1133

Query: 614  AFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
               + G+ ++A  + + +L  G KP++ TY  L+
Sbjct: 1134 HLGKAGKAAEAGKMYEELLTKGWKPNVFTYNALI 1167



 Score =  156 bits (394), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 91/298 (30%), Positives = 158/298 (53%), Gaps = 1/298 (0%)

Query: 342  VALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRL 401
            +A G F  ++ + G   DE TY  ++  +G++ +   + K+ ++M R G +   VTYN +
Sbjct: 898  IAEGLFAEMK-ELGCGPDEFTYNLLLDAMGKSMRIEEMLKVQEEMHRKGYESTYVTYNTI 956

Query: 402  IHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGL 461
            I    ++  L +A+D++  +   G  P   TY  L+D   KAG ++ A +++ +M   G 
Sbjct: 957  ISGLVKSRRLEQAIDLYYNLMSQGFSPTPCTYGPLLDGLLKAGRIEDAENLFNEMLEYGC 1016

Query: 462  SPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALK 521
              +   Y++++N    AG+ +    LF +MV+QG  P++ +Y I+I    KA      L 
Sbjct: 1017 KANCTIYNILLNGHRIAGNTEKVCHLFQDMVDQGINPDIKSYTIIIDTLCKAGQLNDGLT 1076

Query: 522  LYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWG 581
             +R +   G EPD +TY+++++ LG    L+EA ++F EM++K  VP+   Y  L+   G
Sbjct: 1077 YFRQLLEMGLEPDLITYNLLIDGLGKSKRLEEAVSLFNEMQKKGIVPNLYTYNSLILHLG 1136

Query: 582  KAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPS 639
            KAG   +A + YE +L  G +PNV T N+L+  +   G    AY     M+  G  P+
Sbjct: 1137 KAGKAAEAGKMYEELLTKGWKPNVFTYNALIRGYSVSGSTDSAYAAYGRMIVGGCLPN 1194



 Score =  150 bits (379), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 87/301 (28%), Positives = 155/301 (51%)

Query: 349 WLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRA 408
           W  +++  K D  TY T++   G      ++ ++ + M  DG   NVV Y  +I +  + 
Sbjct: 414 WKMKKSDQKPDRVTYITLLDKFGDNGDSQSVMEIWNAMKADGYNDNVVAYTAVIDALCQV 473

Query: 409 NYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTY 468
             + EAL++F +M+  G  P++ +Y +LI    KA     A++++K M   G  P+ +T+
Sbjct: 474 GRVFEALEMFDEMKQKGIVPEQYSYNSLISGFLKADRFGDALELFKHMDIHGPKPNGYTH 533

Query: 469 SVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQN 528
            + IN  GK+G    A Q +  M ++G +P++V  N ++   AK+     A +++ +++ 
Sbjct: 534 VLFINYYGKSGESIKAIQRYELMKSKGIVPDVVAGNAVLFGLAKSGRLGMAKRVFHELKA 593

Query: 529 AGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRK 588
            G  PD +TY+++++        DEA  +F +M   N VPD      L+D   KAG   +
Sbjct: 594 MGVSPDTITYTMMIKCCSKASKFDEAVKIFYDMIENNCVPDVLAVNSLIDTLYKAGRGDE 653

Query: 589 AWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
           AW  +  + +  L P   T N+LL+   R G++ +  HLL+ M +    P+L TY  +L 
Sbjct: 654 AWRIFYQLKEMNLEPTDGTYNTLLAGLGREGKVKEVMHLLEEMYHSNYPPNLITYNTILD 713

Query: 649 C 649
           C
Sbjct: 714 C 714



 Score =  149 bits (377), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 89/313 (28%), Positives = 159/313 (50%), Gaps = 39/313 (12%)

Query: 349 WLRRQA---GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSY 405
           WL R+    G K + ++YT  + +LG+A++F    ++L +M  +GC+P+V+T+  LI   
Sbjct: 341 WLLREMEAHGVKPNVYSYTICIRVLGQAKRFDEAYRILAKMENEGCKPDVITHTVLIQVL 400

Query: 406 GRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDT 465
             A  +++A DVF +M+    +PDRVTY TL+D     G     M+++  M+A G + + 
Sbjct: 401 CDAGRISDAKDVFWKMKKSDQKPDRVTYITLLDKFGDNGDSQSVMEIWNAMKADGYNDNV 460

Query: 466 FTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRD 525
             Y+ +I+ L + G +  A ++F EM  +G +P   +YN +I+   KA  +  AL+L++ 
Sbjct: 461 VAYTAVIDALCQVGRVFEALEMFDEMKQKGIVPEQYSYNSLISGFLKADRFGDALELFKH 520

Query: 526 MQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGN 585
           M   G +P+  T+                                    L ++ +GK+G 
Sbjct: 521 MDIHGPKPNGYTHV-----------------------------------LFINYYGKSGE 545

Query: 586 VRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTL 645
             KA + YE M   G+ P+V   N++L    + G+L  A  +   +  +G+ P   TYT+
Sbjct: 546 SIKAIQRYELMKSKGIVPDVVAGNAVLFGLAKSGRLGMAKRVFHELKAMGVSPDTITYTM 605

Query: 646 LLSCCTEARSPYD 658
           ++ CC++A S +D
Sbjct: 606 MIKCCSKA-SKFD 617



 Score =  145 bits (367), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 86/302 (28%), Positives = 155/302 (51%), Gaps = 3/302 (0%)

Query: 355 GFKHDEHTYTTMVGILGR-ARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNE 413
           G+  +   YT ++  L +  R F A+ ++ D+M + G  P   +YN LI  + +A+   +
Sbjct: 455 GYNDNVVAYTAVIDALCQVGRVFEAL-EMFDEMKQKGIVPEQYSYNSLISGFLKADRFGD 513

Query: 414 ALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIIN 473
           AL++FK M + G +P+  T+   I+ + K+G    A+  Y+ M++ G+ PD    + ++ 
Sbjct: 514 ALELFKHMDIHGPKPNGYTHVLFINYYGKSGESIKAIQRYELMKSKGIVPDVVAGNAVLF 573

Query: 474 CLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEP 533
            L K+G L  A ++F E+   G  P+ +TY +MI   +KA  +  A+K++ DM      P
Sbjct: 574 GLAKSGRLGMAKRVFHELKAMGVSPDTITYTMMIKCCSKASKFDEAVKIFYDMIENNCVP 633

Query: 534 DKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWY 593
           D +  + +++ L   G  DEA  +F +++  N  P +  Y  L+   G+ G V++     
Sbjct: 634 DVLAVNSLIDTLYKAGRGDEAWRIFYQLKEMNLEPTDGTYNTLLAGLGREGKVKEVMHLL 693

Query: 594 EAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTY-TLLLSCCTE 652
           E M  +   PN+ T N++L    + G ++DA  +L  M   G  P L +Y T++     E
Sbjct: 694 EEMYHSNYPPNLITYNTILDCLCKNGAVNDALDMLYSMTTKGCIPDLSSYNTVIYGLVKE 753

Query: 653 AR 654
            R
Sbjct: 754 ER 755



 Score =  136 bits (342), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 81/302 (26%), Positives = 153/302 (50%), Gaps = 1/302 (0%)

Query: 347 FNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYG 406
           F+ ++RQ   K +  T+  + G LG      +    L  M   G   N  TYN L++   
Sbjct: 238 FDVMQRQI-VKANVGTFAAIFGGLGVEGGLRSAPVALPVMKEAGIVLNAYTYNGLVYFLV 296

Query: 407 RANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTF 466
           ++ +  EAL+V++ M V G  P   TY  L+    K   ++  + + ++M+A G+ P+ +
Sbjct: 297 KSGFDREALEVYRVMMVDGVVPSVRTYSVLMVAFGKRRDVETVLWLLREMEAHGVKPNVY 356

Query: 467 TYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDM 526
           +Y++ I  LG+A     A+++  +M N+GC P+++T+ ++I +   A     A  ++  M
Sbjct: 357 SYTICIRVLGQAKRFDEAYRILAKMENEGCKPDVITHTVLIQVLCDAGRISDAKDVFWKM 416

Query: 527 QNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNV 586
           + +  +PD+VTY  +++  G  G       ++  M+   +  +   Y  ++D   + G V
Sbjct: 417 KKSDQKPDRVTYITLLDKFGDNGDSQSVMEIWNAMKADGYNDNVVAYTAVIDALCQVGRV 476

Query: 587 RKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLL 646
            +A E ++ M Q G+ P   + NSL+S FL+  +  DA  L + M   G KP+  T+ L 
Sbjct: 477 FEALEMFDEMKQKGIVPEQYSYNSLISGFLKADRFGDALELFKHMDIHGPKPNGYTHVLF 536

Query: 647 LS 648
           ++
Sbjct: 537 IN 538



 Score =  130 bits (327), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 79/305 (25%), Positives = 155/305 (50%), Gaps = 2/305 (0%)

Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLI 402
           AL  F+ ++ Q G   ++++Y +++    +A +FG   +L   M   G +PN  T+   I
Sbjct: 479 ALEMFDEMK-QKGIVPEQYSYNSLISGFLKADRFGDALELFKHMDIHGPKPNGYTHVLFI 537

Query: 403 HSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLS 462
           + YG++    +A+  ++ M+  G  PD V    ++   AK+G L +A  ++ +++A G+S
Sbjct: 538 NYYGKSGESIKAIQRYELMKSKGIVPDVVAGNAVLFGLAKSGRLGMAKRVFHELKAMGVS 597

Query: 463 PDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKL 522
           PDT TY+++I C  KA     A ++F +M+   C+P+++  N +I    KA     A ++
Sbjct: 598 PDTITYTMMIKCCSKASKFDEAVKIFYDMIENNCVPDVLAVNSLIDTLYKAGRGDEAWRI 657

Query: 523 YRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGK 582
           +  ++    EP   TY+ ++  LG  G + E   +  EM   N+ P+   Y  ++D   K
Sbjct: 658 FYQLKEMNLEPTDGTYNTLLAGLGREGKVKEVMHLLEEMYHSNYPPNLITYNTILDCLCK 717

Query: 583 AGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQT 642
            G V  A +   +M   G  P++ + N+++   ++  + ++A+ +   M  + L P   T
Sbjct: 718 NGAVNDALDMLYSMTTKGCIPDLSSYNTVIYGLVKEERYNEAFSIFCQMKKV-LIPDYAT 776

Query: 643 YTLLL 647
              +L
Sbjct: 777 LCTIL 781



 Score =  129 bits (323), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 97/374 (25%), Positives = 173/374 (46%), Gaps = 4/374 (1%)

Query: 375 QFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYC 434
           + G + ++ D M R   + NV T+  +    G    L  A      M+  G   +  TY 
Sbjct: 230 RVGDMAEVFDVMQRQIVKANVGTFAAIFGGLGVEGGLRSAPVALPVMKEAGIVLNAYTYN 289

Query: 435 TLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQ 494
            L+    K+GF   A+++Y+ M   G+ P   TYSV++   GK   ++    L  EM   
Sbjct: 290 GLVYFLVKSGFDREALEVYRVMMVDGVVPSVRTYSVLMVAFGKRRDVETVLWLLREMEAH 349

Query: 495 GCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEA 554
           G  PN+ +Y I I +  +A+ +  A ++   M+N G +PD +T++++++VL   G + +A
Sbjct: 350 GVKPNVYSYTICIRVLGQAKRFDEAYRILAKMENEGCKPDVITHTVLIQVLCDAGRISDA 409

Query: 555 EAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSA 614
           + VF +M++ +  PD   Y  L+D +G  G+ +   E + AM   G   NV    +++ A
Sbjct: 410 KDVFWKMKKSDQKPDRVTYITLLDKFGDNGDSQSVMEIWNAMKADGYNDNVVAYTAVIDA 469

Query: 615 FLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGFCHELMAVSGHP-- 672
             +VG++ +A  +   M   G+ P   +Y  L+S   +A    D     + M + G    
Sbjct: 470 LCQVGRVFEALEMFDEMKQKGIVPEQYSYNSLISGFLKADRFGDALELFKHMDIHGPKPN 529

Query: 673 AHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRESKRGLVDAVVDFLHKSGLKEEAGSV 732
            +  +L +   G  G++++       E+M S+         +AV+  L KSG    A  V
Sbjct: 530 GYTHVLFINYYGKSGESIK--AIQRYELMKSKGIVPDVVAGNAVLFGLAKSGRLGMAKRV 587

Query: 733 WEVAAQKNVYPDAV 746
           +       V PD +
Sbjct: 588 FHELKAMGVSPDTI 601



 Score =  111 bits (278), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 92/393 (23%), Positives = 175/393 (44%), Gaps = 18/393 (4%)

Query: 363  YTTMVGILGRARQFG----AINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVF 418
            Y T+  IL    + G    A++ + D  ++ G + +  + + L+    +   + ++++  
Sbjct: 774  YATLCTILPSFVKIGLMKEALHIIKDYFLQPGSKTDRSSCHSLMEGILKKAGIEKSIEFA 833

Query: 419  KQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKA 478
            + +   G   D    C LI    K      A ++ KK ++ G+S  T  Y+ +I  L   
Sbjct: 834  EIIASSGITLDDFFLCPLIKHLCKQKKALEAHELVKKFKSFGVSLKTGLYNSLICGLVDE 893

Query: 479  GHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTY 538
              +  A  LF EM   GC P+  TYN+++    K+   +  LK+  +M   G+E   VTY
Sbjct: 894  NLIDIAEGLFAEMKELGCGPDEFTYNLLLDAMGKSMRIEEMLKVQEEMHRKGYESTYVTY 953

Query: 539  SIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQ 598
            + ++  L     L++A  ++  +  + + P    YG L+D   KAG +  A   +  ML+
Sbjct: 954  NTIISGLVKSRRLEQAIDLYYNLMSQGFSPTPCTYGPLLDGLLKAGRIEDAENLFNEMLE 1013

Query: 599  AGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYD 658
             G + N    N LL+     G      HL Q M++ G+ P +++YT+++    +A    D
Sbjct: 1014 YGCKANCTIYNILLNGHRIAGNTEKVCHLFQDMVDQGINPDIKSYTIIIDTLCKAGQLND 1073

Query: 659  -MGFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRESKRGLV---- 713
             + +  +L+ +   P  +    +       + + + V  F EM        K+G+V    
Sbjct: 1074 GLTYFRQLLEMGLEPDLITYNLLIDGLGKSKRLEEAVSLFNEM-------QKKGIVPNLY 1126

Query: 714  --DAVVDFLHKSGLKEEAGSVWEVAAQKNVYPD 744
              ++++  L K+G   EAG ++E    K   P+
Sbjct: 1127 TYNSLILHLGKAGKAAEAGKMYEELLTKGWKPN 1159



 Score = 60.8 bits (146), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 39/129 (30%), Positives = 65/129 (50%), Gaps = 4/129 (3%)

Query: 336  QLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNV 395
            QL D    L +F  L  + G + D  TY  ++  LG++++      L ++M + G  PN+
Sbjct: 1070 QLND---GLTYFRQLL-EMGLEPDLITYNLLIDGLGKSKRLEEAVSLFNEMQKKGIVPNL 1125

Query: 396  VTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKK 455
             TYN LI   G+A    EA  +++++   G +P+  TY  LI  ++ +G  D A   Y +
Sbjct: 1126 YTYNSLILHLGKAGKAAEAGKMYEELLTKGWKPNVFTYNALIRGYSVSGSTDSAYAAYGR 1185

Query: 456  MQAAGLSPD 464
            M   G  P+
Sbjct: 1186 MIVGGCLPN 1194



 Score = 48.5 bits (114), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 39/151 (25%), Positives = 68/151 (45%)

Query: 504 NIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRR 563
           N M+ L           +++  MQ    + +  T++ +   LG  G L  A      M+ 
Sbjct: 219 NYMLELMRGHGRVGDMAEVFDVMQRQIVKANVGTFAAIFGGLGVEGGLRSAPVALPVMKE 278

Query: 564 KNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSD 623
              V +   Y  LV    K+G  R+A E Y  M+  G+ P+V T + L+ AF +   +  
Sbjct: 279 AGIVLNAYTYNGLVYFLVKSGFDREALEVYRVMMVDGVVPSVRTYSVLMVAFGKRRDVET 338

Query: 624 AYHLLQGMLNLGLKPSLQTYTLLLSCCTEAR 654
              LL+ M   G+KP++ +YT+ +    +A+
Sbjct: 339 VLWLLREMEAHGVKPNVYSYTICIRVLGQAK 369


>gi|356557791|ref|XP_003547194.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
           chloroplastic-like [Glycine max]
          Length = 793

 Score =  156 bits (395), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 109/371 (29%), Positives = 171/371 (46%), Gaps = 17/371 (4%)

Query: 297 VVESVSRILR-QWKWGPLAEEALGNTNYSMDAYQANQVLKQLQDHTVALGFFNWLRRQAG 355
           VV  V R++     W P  E  L +   S+       VL+   D  VAL FF W  RQ  
Sbjct: 136 VVREVCRLITLSSAWNPNFEGRLRHLLRSLKPPLVCAVLRSQADERVALNFFYWADRQWR 195

Query: 356 FKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDG--CQPNVVTYNRLIHSYGRANYLNE 413
           + H    Y TM+ +L + +      ++L  M R G  C P    Y  ++ SY RA  L  
Sbjct: 196 YSHHPVVYYTMLDVLSKTKLCQGARRVLRLMTRRGIECPPEAFGY--VMVSYSRAGKLRN 253

Query: 414 ALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIIN 473
           AL V   MQ  G EP      T I +  K G L+ A+   ++MQ  G+ PD  TY+ +I 
Sbjct: 254 ALRVLTLMQKAGVEPSLSICNTTIYVLVKGGKLEKALKFLERMQVTGIKPDIVTYNSLIK 313

Query: 474 CLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQ-NAGFE 532
                  ++ A +L   + ++GC P+ V+Y  ++    K +  +    L   M  N+   
Sbjct: 314 GYCDLNRIEDALELIAGLPSKGCPPDKVSYYTVMGFLCKEKKIEEVKCLMEKMVWNSNLI 373

Query: 533 PDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEW 592
           PD+VTY+ ++ +L   G+ D+A A   E + K +  D+  Y  +V  + + G + +A   
Sbjct: 374 PDQVTYNTLIHMLSKHGHADDALAFLKEAQDKGFHIDKVGYSAIVHSFCQKGRMDEAKSL 433

Query: 593 YEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTE 652
              M   G  P+V T  +++  F R+G++ +A  +LQ M   G KP+  +YT LL+    
Sbjct: 434 VIDMYSRGCNPDVVTYTAIVDGFCRLGRIDEAKKILQQMYKHGCKPNTVSYTALLN---- 489

Query: 653 ARSPYDMGFCH 663
                  G CH
Sbjct: 490 -------GLCH 493



 Score =  123 bits (308), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 87/323 (26%), Positives = 147/323 (45%), Gaps = 2/323 (0%)

Query: 313 LAEEALGNTNYSMDAYQANQVLKQLQDHTVALGFFNWLR--RQAGFKHDEHTYTTMVGIL 370
           L E+ + N+N   D    N ++  L  H  A     +L+  +  GF  D+  Y+ +V   
Sbjct: 362 LMEKMVWNSNLIPDQVTYNTLIHMLSKHGHADDALAFLKEAQDKGFHIDKVGYSAIVHSF 421

Query: 371 GRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDR 430
            +  +      L+  M   GC P+VVTY  ++  + R   ++EA  + +QM   GC+P+ 
Sbjct: 422 CQKGRMDEAKSLVIDMYSRGCNPDVVTYTAIVDGFCRLGRIDEAKKILQQMYKHGCKPNT 481

Query: 431 VTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCE 490
           V+Y  L++    +G    A +M    +    +P+  TY  +++ L + G L  A  L  E
Sbjct: 482 VSYTALLNGLCHSGKSLEAREMINVSEEHWWTPNAITYGAVMHGLRREGKLSEACDLTRE 541

Query: 491 MVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGY 550
           MV +G  P  V  N++I    + +    A K   +  N G   + V ++ V+      G 
Sbjct: 542 MVEKGFFPTPVEINLLIQSLCQNQKVVEAKKYLEECLNKGCAINVVNFTTVIHGFCQIGD 601

Query: 551 LDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNS 610
           ++ A +V  +M      PD   Y  L D  GK G + +A E    ML  GL P   T  S
Sbjct: 602 MEAALSVLDDMYLSGKHPDAVTYTALFDALGKKGRLDEAAELIVKMLSKGLDPTPVTYRS 661

Query: 611 LLSAFLRVGQLSDAYHLLQGMLN 633
           ++  + + G++ D  +LL+ ML 
Sbjct: 662 VIHRYSQWGRVDDMLNLLEKMLK 684



 Score =  113 bits (283), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 80/334 (23%), Positives = 144/334 (43%), Gaps = 36/334 (10%)

Query: 350 LRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRAN 409
           L ++AG +       T + +L +  +     K L++M   G +P++VTYN LI  Y   N
Sbjct: 260 LMQKAGVEPSLSICNTTIYVLVKGGKLEKALKFLERMQVTGIKPDIVTYNSLIKGYCDLN 319

Query: 410 YLNEALDVFKQMQVVGCEPDRV------------------------------------TY 433
            + +AL++   +   GC PD+V                                    TY
Sbjct: 320 RIEDALELIAGLPSKGCPPDKVSYYTVMGFLCKEKKIEEVKCLMEKMVWNSNLIPDQVTY 379

Query: 434 CTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVN 493
            TLI + +K G  D A+   K+ Q  G   D   YS I++   + G +  A  L  +M +
Sbjct: 380 NTLIHMLSKHGHADDALAFLKEAQDKGFHIDKVGYSAIVHSFCQKGRMDEAKSLVIDMYS 439

Query: 494 QGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDE 553
           +GC P++VTY  ++    +      A K+ + M   G +P+ V+Y+ ++  L H G   E
Sbjct: 440 RGCNPDVVTYTAIVDGFCRLGRIDEAKKILQQMYKHGCKPNTVSYTALLNGLCHSGKSLE 499

Query: 554 AEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLS 613
           A  +        W P+   YG ++    + G + +A +    M++ G  P     N L+ 
Sbjct: 500 AREMINVSEEHWWTPNAITYGAVMHGLRREGKLSEACDLTREMVEKGFFPTPVEINLLIQ 559

Query: 614 AFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
           +  +  ++ +A   L+  LN G   ++  +T ++
Sbjct: 560 SLCQNQKVVEAKKYLEECLNKGCAINVVNFTTVI 593



 Score =  105 bits (262), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 77/293 (26%), Positives = 131/293 (44%), Gaps = 2/293 (0%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           G   D  TYT +V    R  +     K+L QM + GC+PN V+Y  L++    +    EA
Sbjct: 441 GCNPDVVTYTAIVDGFCRLGRIDEAKKILQQMYKHGCKPNTVSYTALLNGLCHSGKSLEA 500

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
            ++    +     P+ +TY  ++    + G L  A D+ ++M   G  P     +++I  
Sbjct: 501 REMINVSEEHWWTPNAITYGAVMHGLRREGKLSEACDLTREMVEKGFFPTPVEINLLIQS 560

Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPD 534
           L +   +  A +   E +N+GC  N+V +  +I    +  + ++AL +  DM  +G  PD
Sbjct: 561 LCQNQKVVEAKKYLEECLNKGCAINVVNFTTVIHGFCQIGDMEAALSVLDDMYLSGKHPD 620

Query: 535 KVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYE 594
            VTY+ + + LG  G LDEA  +  +M  K   P    Y  ++  + + G V       E
Sbjct: 621 AVTYTALFDALGKKGRLDEAAELIVKMLSKGLDPTPVTYRSVIHRYSQWGRVDDMLNLLE 680

Query: 595 AMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
            ML+   +P     N ++      G L +A  LL  +L    K    T  +L+
Sbjct: 681 KMLKR--QPFRTVYNQVIEKLCDFGNLEEAEKLLGKVLRTASKVDANTCHVLM 731



 Score =  103 bits (257), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 70/285 (24%), Positives = 130/285 (45%)

Query: 359 DEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVF 418
           D+ TY T++ +L +          L +    G   + V Y+ ++HS+ +   ++EA  + 
Sbjct: 375 DQVTYNTLIHMLSKHGHADDALAFLKEAQDKGFHIDKVGYSAIVHSFCQKGRMDEAKSLV 434

Query: 419 KQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKA 478
             M   GC PD VTY  ++D   + G +D A  + ++M   G  P+T +Y+ ++N L  +
Sbjct: 435 IDMYSRGCNPDVVTYTAIVDGFCRLGRIDEAKKILQQMYKHGCKPNTVSYTALLNGLCHS 494

Query: 479 GHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTY 538
           G    A ++          PN +TY  ++    +      A  L R+M   GF P  V  
Sbjct: 495 GKSLEAREMINVSEEHWWTPNAITYGAVMHGLRREGKLSEACDLTREMVEKGFFPTPVEI 554

Query: 539 SIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQ 598
           +++++ L     + EA+    E   K    +   +  ++  + + G++  A    + M  
Sbjct: 555 NLLIQSLCQNQKVVEAKKYLEECLNKGCAINVVNFTTVIHGFCQIGDMEAALSVLDDMYL 614

Query: 599 AGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTY 643
           +G  P+  T  +L  A  + G+L +A  L+  ML+ GL P+  TY
Sbjct: 615 SGKHPDAVTYTALFDALGKKGRLDEAAELIVKMLSKGLDPTPVTY 659



 Score = 58.5 bits (140), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 56/214 (26%), Positives = 86/214 (40%), Gaps = 43/214 (20%)

Query: 380 NKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDI 439
            K L++ +  GC  NVV +  +IH + +   +  AL V   M + G  PD VTY  L D 
Sbjct: 571 KKYLEECLNKGCAINVVNFTTVIHGFCQIGDMEAALSVLDDMYLSGKHPDAVTYTALFDA 630

Query: 440 HAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII-------------NCLGKA-------- 478
             K G LD A ++  KM + GL P   TY  +I             N L K         
Sbjct: 631 LGKKGRLDEAAELIVKMLSKGLDPTPVTYRSVIHRYSQWGRVDDMLNLLEKMLKRQPFRT 690

Query: 479 ------------GHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDM 526
                       G+L+ A +L  +++      +  T ++++    K     SA K+   M
Sbjct: 691 VYNQVIEKLCDFGNLEEAEKLLGKVLRTASKVDANTCHVLMESYLKKGVAISAYKVACRM 750

Query: 527 QNAGFEPD-----KVTYSIVMEVLGHCGYLDEAE 555
                 PD     KV+  +V++     G L EA+
Sbjct: 751 FRRNLTPDLKLCEKVSKKLVLD-----GKLVEAD 779


>gi|38344241|emb|CAE02059.2| OJ991113_30.18 [Oryza sativa Japonica Group]
          Length = 736

 Score =  156 bits (395), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 102/344 (29%), Positives = 161/344 (46%), Gaps = 42/344 (12%)

Query: 362 TYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQM 421
           TY  +V  L +A +    ++LLD M+  GC+PN + Y+ LI  + +A  ++ A +VF QM
Sbjct: 381 TYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQM 440

Query: 422 QVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHL 481
              G  P   TY +LID   K G LD+AM +  +M     +P+  TY+ +I+ L + G  
Sbjct: 441 TKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGES 500

Query: 482 QAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIV 541
           + A +L   M  +GC PN+VTY  +I    KA     +L L+  M   G  P+ VTY ++
Sbjct: 501 EKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYRVL 560

Query: 542 MEVLGHCGYLDEAEAVFAEMRRKNW---------------------------------VP 568
           +  L   G LD+A  +  EM++  W                                 VP
Sbjct: 561 INHLCAAGLLDKARLLLGEMKQTYWPKYLQGYRCAIQGFSKSFIASLGILEEMESYGTVP 620

Query: 569 DEPVYGLLVDLWGKAGNVRKAWEWYEAMLQ--AGLRPNVPTCNSLLSAFLRVGQLSDAYH 626
             PVYG+L+D + KAG +  A E ++ M++  + ++ +     SL+ A     Q+ +A+ 
Sbjct: 621 IAPVYGMLIDCFSKAGRLEIAMELHKEMMEVPSSVKTDNDMYASLIQALCLASQVEEAFR 680

Query: 627 LLQGMLNLGLKPSLQTYTLLLSCCTEARSPYD------MGFCHE 664
           L   M   G  P L  +  L+    E +  +D       G CHE
Sbjct: 681 LYSEMTRRGFVPELSVFVCLIKGLVEVKK-WDEALQLCYGICHE 723



 Score =  148 bits (374), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 91/313 (29%), Positives = 151/313 (48%), Gaps = 16/313 (5%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           +  G   D +TYT ++    +A        L ++M   GC P VVTY  LIH+Y +A  +
Sbjct: 250 KMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQV 309

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAG----------- 460
            +A D+F +M   GC P+ VTY  L+D   KAG +  A ++Y K+               
Sbjct: 310 PQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPC 369

Query: 461 -----LSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARN 515
                L+P+  TY  +++ L KA  +  AH+L   M++ GC PN + Y+ +I    KA  
Sbjct: 370 EDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGK 429

Query: 516 YQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGL 575
             SA +++  M   G+ P   TY+ +++ +   G LD A  V ++M + +  P+   Y  
Sbjct: 430 IDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTA 489

Query: 576 LVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLG 635
           ++D   + G   KA +    M + G  PNV T  +L+    + G++  +  L   M   G
Sbjct: 490 MIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKG 549

Query: 636 LKPSLQTYTLLLS 648
             P+  TY +L++
Sbjct: 550 CSPNYVTYRVLIN 562



 Score =  145 bits (366), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 90/311 (28%), Positives = 151/311 (48%), Gaps = 16/311 (5%)

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
           + GF  D  TY+ ++  L  A +      L  +M   G  P+V TY  LI S+ +A  + 
Sbjct: 216 RKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIE 275

Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
           +A  +F++M+ VGC P  VTY  LI  + KA  +  A D++ +M  AG  P+  TY  ++
Sbjct: 276 QAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALV 335

Query: 473 NCLGKAGHLQAAHQLFCEMVN----------------QGCIPNLVTYNIMIALQAKARNY 516
           + L KAG++  A +++ +++                     PN+VTY  ++    KA   
Sbjct: 336 DGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKV 395

Query: 517 QSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLL 576
             A +L   M ++G EP+ + Y  +++     G +D A+ VF +M +  ++P    Y  L
Sbjct: 396 DHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSL 455

Query: 577 VDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGL 636
           +D   K G +  A +    ML+    PNV T  +++    R+G+   A  LL  M   G 
Sbjct: 456 IDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGC 515

Query: 637 KPSLQTYTLLL 647
            P++ TYT L+
Sbjct: 516 SPNVVTYTALI 526



 Score =  139 bits (350), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 88/289 (30%), Positives = 146/289 (50%), Gaps = 16/289 (5%)

Query: 375 QFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYC 434
           +F    +L+ +M+R G  P+  TY+++I     A  + +A  +F++M++VG  PD  TY 
Sbjct: 203 KFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYT 262

Query: 435 TLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQ 494
            LID   KAG ++ A  ++++M++ G SP   TY+ +I+   KA  +  A+ +F  MV+ 
Sbjct: 263 ILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDA 322

Query: 495 GCIPNLVTYNIMIALQAKARNYQSALKLY------RDMQNAGF----------EPDKVTY 538
           GC PN VTY  ++    KA N   A ++Y       D  ++ F           P+ VTY
Sbjct: 323 GCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTY 382

Query: 539 SIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQ 598
             +++ L     +D A  +   M      P+  VY  L+D + KAG +  A E +  M +
Sbjct: 383 GALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTK 442

Query: 599 AGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
            G  P+V T  SL+    + G+L  A  +L  ML     P++ TYT ++
Sbjct: 443 CGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMI 491



 Score =  134 bits (338), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 84/338 (24%), Positives = 156/338 (46%), Gaps = 11/338 (3%)

Query: 304 ILRQWKWGPLAEEALGNTNYSMDAYQANQVLKQLQDHTV---ALGFFNWLRRQAGFKHDE 360
           + ++ +W   A + +   ++ +D      ++  L + +    A+ F + +R  +    + 
Sbjct: 20  LCKEGRWAD-ALDMIEREDFKLDTVLCTHMISGLMEASYFDEAMSFLHRMRCNSCIP-NV 77

Query: 361 HTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQ 420
            TY T++    + +Q G   ++++ M+ +GC PN   +N L+HSY        A  +  +
Sbjct: 78  VTYRTLLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNR 137

Query: 421 MQVVGCEPDRVTYCTLI------DIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
           M   GC P  V Y   I      +       LD+A  +Y +M AA    +    +    C
Sbjct: 138 MTTCGCPPGYVVYNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARC 197

Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPD 534
           L   G    A QL  EM+ +G +P+  TY+ +I     A   + A  L+++M+  G  PD
Sbjct: 198 LCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPD 257

Query: 535 KVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYE 594
             TY+I+++     G +++A+ +F EMR     P    Y  L+  + KA  V +A + + 
Sbjct: 258 VYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFH 317

Query: 595 AMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGML 632
            M+ AG RPN  T  +L+    + G +S A+ +   ++
Sbjct: 318 RMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLI 355



 Score =  134 bits (336), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 95/342 (27%), Positives = 152/342 (44%), Gaps = 57/342 (16%)

Query: 363 YTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHS------------------ 404
           + ++V      + +    KLL++M   GC P  V YN  I S                  
Sbjct: 115 FNSLVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYNIFIGSICGQEKLPSPDLLDLAEK 174

Query: 405 -YGR-------------ANY---------LNEALDVFKQMQVVGCEPDRVTYCTLIDIHA 441
            YG              AN+          ++A  + K+M   G  PD  TY  +I    
Sbjct: 175 IYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLC 234

Query: 442 KAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLV 501
            A  ++ A  ++++M+  G++PD +TY+++I+   KAG ++ A  LF EM + GC P +V
Sbjct: 235 HATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVV 294

Query: 502 TYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEM 561
           TY  +I    KA+    A  ++  M +AG  P+ VTY  +++ L   G + +A  V+A++
Sbjct: 295 TYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKL 354

Query: 562 ----------------RRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNV 605
                            R    P+   YG LVD   KA  V  A E  +AML +G  PN 
Sbjct: 355 IGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNH 414

Query: 606 PTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
              ++L+  F + G++  A  +   M   G  PS+ TYT L+
Sbjct: 415 IVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLI 456



 Score =  130 bits (326), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 85/289 (29%), Positives = 140/289 (48%), Gaps = 10/289 (3%)

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
           + G+    HTYT+++  + +  +     K+L QM++D C PNVVTY  +I    R     
Sbjct: 442 KCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESE 501

Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
           +AL +   M+  GC P+ VTY  LID   KAG +D+++D++ +M   G SP+  TY V+I
Sbjct: 502 KALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYRVLI 561

Query: 473 NCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFE 532
           N L  AG L  A  L  EM        L  Y    A+Q  ++++ ++L +  +M++ G  
Sbjct: 562 NHLCAAGLLDKARLLLGEMKQTYWPKYLQGYR--CAIQGFSKSFIASLGILEEMESYGTV 619

Query: 533 PDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVP-----DEPVYGLLVDLWGKAGNVR 587
           P    Y ++++     G L+ A  +  EM     VP     D  +Y  L+     A  V 
Sbjct: 620 PIAPVYGMLIDCFSKAGRLEIAMELHKEMME---VPSSVKTDNDMYASLIQALCLASQVE 676

Query: 588 KAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGL 636
           +A+  Y  M + G  P +     L+   + V +  +A  L  G+ + G+
Sbjct: 677 EAFRLYSEMTRRGFVPELSVFVCLIKGLVEVKKWDEALQLCYGICHEGV 725



 Score =  123 bits (309), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 83/277 (29%), Positives = 135/277 (48%), Gaps = 3/277 (1%)

Query: 393 PNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDM 452
           PNVVTY  L+    +A+ ++ A ++   M   GCEP+ + Y  LID   KAG +D A ++
Sbjct: 377 PNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEV 436

Query: 453 YKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAK 512
           + +M   G  P   TY+ +I+ + K G L  A ++  +M+   C PN+VTY  MI    +
Sbjct: 437 FLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCR 496

Query: 513 ARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPV 572
               + ALKL   M+  G  P+ VTY+ +++ LG  G +D +  +F +M RK   P+   
Sbjct: 497 IGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVT 556

Query: 573 YGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGML 632
           Y +L++    AG + KA      M Q      +      +  F +      +  +L+ M 
Sbjct: 557 YRVLINHLCAAGLLDKARLLLGEMKQTYWPKYLQGYRCAIQGFSK--SFIASLGILEEME 614

Query: 633 NLGLKPSLQTYTLLLSCCTEA-RSPYDMGFCHELMAV 668
           + G  P    Y +L+ C ++A R    M    E+M V
Sbjct: 615 SYGTVPIAPVYGMLIDCFSKAGRLEIAMELHKEMMEV 651



 Score =  121 bits (303), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 101/400 (25%), Positives = 158/400 (39%), Gaps = 22/400 (5%)

Query: 356 FKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEAL 415
           FK D    T M+  L  A  F      L +M  + C PNVVTY  L+  + +   L    
Sbjct: 38  FKLDTVLCTHMISGLMEASYFDEAMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQLGWCK 97

Query: 416 DVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIIN-- 473
            +   M   GC P+   + +L+  +        A  +  +M   G  P    Y++ I   
Sbjct: 98  RIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYNIFIGSI 157

Query: 474 C----LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNA 529
           C    L     L  A +++ EM+   C+ N V              +  A +L ++M   
Sbjct: 158 CGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRK 217

Query: 530 GFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKA 589
           GF PD  TYS V+  L H   +++A  +F EM+     PD   Y +L+D + KAG + +A
Sbjct: 218 GFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQA 277

Query: 590 WEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS- 648
              +E M   G  P V T  +L+ A+L+  Q+  A  +   M++ G +P+  TY  L+  
Sbjct: 278 QWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDG 337

Query: 649 CCTEARSPYDMGFCHELMAVSGHPAHMFLLSMPSPGPDGQNV---------------RDH 693
            C             +L+  S      F            NV                DH
Sbjct: 338 LCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDH 397

Query: 694 VGSFLEMMHSEDRESKRGLVDAVVDFLHKSGLKEEAGSVW 733
               L+ M S   E    + DA++D   K+G  + A  V+
Sbjct: 398 AHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVF 437



 Score =  107 bits (267), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 82/302 (27%), Positives = 131/302 (43%), Gaps = 11/302 (3%)

Query: 353 QAGFKHDEHTYTTMVGILGRAR-QFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           ++GF  D  T    VG    A  + G     LD + R+  + + V    +I     A+Y 
Sbjct: 3   ESGFCMDRFT----VGCFAHALCKEGRWADALDMIEREDFKLDTVLCTHMISGLMEASYF 58

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
           +EA+    +M+   C P+ VTY TL+    K   L     +   M   G +P+   ++ +
Sbjct: 59  DEAMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSL 118

Query: 472 INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQS------ALKLYRD 525
           ++          A++L   M   GC P  V YNI I          S      A K+Y +
Sbjct: 119 VHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYNIFIGSICGQEKLPSPDLLDLAEKIYGE 178

Query: 526 MQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGN 585
           M  A    +KV  +     L   G  D+A  +  EM RK +VPD   Y  ++     A  
Sbjct: 179 MLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATK 238

Query: 586 VRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTL 645
           V KA+  ++ M   G+ P+V T   L+ +F + G +  A  L + M ++G  P++ TYT 
Sbjct: 239 VEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTA 298

Query: 646 LL 647
           L+
Sbjct: 299 LI 300



 Score = 78.6 bits (192), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 57/216 (26%), Positives = 95/216 (43%), Gaps = 35/216 (16%)

Query: 350 LRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRAN 409
           L  + G   +  TYT ++  LG+A +      L  QM R GC PN VTY  LI+    A 
Sbjct: 509 LMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYRVLINHLCAAG 568

Query: 410 YLNEA---------------------------------LDVFKQMQVVGCEPDRVTYCTL 436
            L++A                                 L + ++M+  G  P    Y  L
Sbjct: 569 LLDKARLLLGEMKQTYWPKYLQGYRCAIQGFSKSFIASLGILEEMESYGTVPIAPVYGML 628

Query: 437 IDIHAKAGFLDVAMDMYKKMQA--AGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQ 494
           ID  +KAG L++AM+++K+M    + +  D   Y+ +I  L  A  ++ A +L+ EM  +
Sbjct: 629 IDCFSKAGRLEIAMELHKEMMEVPSSVKTDNDMYASLIQALCLASQVEEAFRLYSEMTRR 688

Query: 495 GCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAG 530
           G +P L  +  +I    + + +  AL+L   + + G
Sbjct: 689 GFVPELSVFVCLIKGLVEVKKWDEALQLCYGICHEG 724


>gi|356499433|ref|XP_003518545.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g06920-like [Glycine max]
          Length = 905

 Score =  156 bits (395), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 91/296 (30%), Positives = 155/296 (52%)

Query: 359 DEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVF 418
           D  T+ +++  LGR  +      L ++M+  G  PN V Y  LI ++ +     +   ++
Sbjct: 480 DSVTFCSLIDGLGRHGKVNDAYMLYEKMLDSGQTPNAVVYTSLIRNFFKCGRKEDGHKIY 539

Query: 419 KQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKA 478
           K+M   GC PD +     +D   KAG ++    ++++++A GL+PD  +YS++I+ L K 
Sbjct: 540 KEMMHRGCSPDLMLLNNYMDCVFKAGEIEKGRALFEEIKAQGLTPDVRSYSILIHGLVKG 599

Query: 479 GHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTY 538
           G  +  ++LF EM  QG   +   YNI+I    K+     A +L  +M+  G +P  VTY
Sbjct: 600 GFSKDTYKLFYEMKEQGLHLDTRAYNIVIDGFCKSGKVNKAYQLLEEMKTKGLQPTVVTY 659

Query: 539 SIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQ 598
             V++ L     LDEA  +F E + K    +  VY  L+D +GK G + +A+   E ++Q
Sbjct: 660 GSVIDGLAKIDRLDEAYMLFEEAKSKAVDLNVVVYSSLIDGFGKVGRIDEAYLILEELMQ 719

Query: 599 AGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEAR 654
            GL PN  T N LL A ++  ++ +A    Q M NL   P+  TY+++++   + R
Sbjct: 720 KGLTPNTYTWNCLLDALVKAEEIDEALVCFQNMKNLKCPPNEVTYSIMVNGLCKVR 775



 Score =  153 bits (387), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 120/518 (23%), Positives = 219/518 (42%), Gaps = 71/518 (13%)

Query: 298 VESVSRILRQWKWGPLAEEALGNTNYSMDAYQANQVLKQLQDHTVALGFFNWLRRQAGFK 357
           V  V R+L  + WG   E+AL   +          V+++L+D  VAL +F W+ R+    
Sbjct: 70  VHDVCRVLDTYPWGAALEDALNTFDEMPQPELVVGVIRRLKDVRVALHYFRWVERKTKQL 129

Query: 358 HDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA--- 414
           H    Y  ++ ++ R R    + ++L++M   G  P+  T   ++ S+ ++  L EA   
Sbjct: 130 HSPEAYNALLMLMARTRNLEYLEQILEEMSMAGFGPSNNTCIEMVASFVKSRKLREAFGV 189

Query: 415 --------------------------------LDVFKQMQVVGCEPDRVTYCTLIDIHAK 442
                                           L + +QMQ +G E     + TLI + A+
Sbjct: 190 IETMRKFKFRPAYSAYTTLIGALSAAHEADPMLTLLRQMQEIGYEVTVHLFTTLICVFAR 249

Query: 443 AGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVT 502
            G +D A+ +  +M++   + D   Y+V I+C GK G +  A + F E+ +QG +P+ VT
Sbjct: 250 EGRVDAALSLLDEMKSNSFNADLVLYNVCIDCFGKVGKVDMAWKFFHELKSQGLVPDDVT 309

Query: 503 YNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMR 562
           +  MI +  KA     A++L+ ++ +    P    Y+ ++   G  G  +EA ++    +
Sbjct: 310 FTSMIGVLCKAERVDEAVELFEELDSNKSVPCVYAYNTMIMGYGSVGKFNEAYSLLERQK 369

Query: 563 RKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLS 622
           RK  +P    Y  ++   G+ G V +A    EAM +    PN+ + N L+    + G+L 
Sbjct: 370 RKGCIPSVIAYNCILTCLGRKGKVEEALRILEAM-KMDAAPNLTSYNILIDMLCKAGELE 428

Query: 623 DAYHLLQGMLNLGLKPSLQTYTLLLS-CCTEAR----------------SPYDMGFCHEL 665
            A  +   M   GL P++ T  +++   C   R                +P  + FC  +
Sbjct: 429 AALKVQDSMKEAGLFPNIITVNIMIDRLCKAQRLDEACSIFLGLDHKVCTPDSVTFCSLI 488

Query: 666 MAVSGH----PAHMFLLSMPSPG--PDGQNVRDHVGSFLEMMHSEDRES------KRG-- 711
             +  H     A+M    M   G  P+       + +F +    ED          RG  
Sbjct: 489 DGLGRHGKVNDAYMLYEKMLDSGQTPNAVVYTSLIRNFFKCGRKEDGHKIYKEMMHRGCS 548

Query: 712 ----LVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDA 745
               L++  +D + K+G  E+  +++E    + + PD 
Sbjct: 549 PDLMLLNNYMDCVFKAGEIEKGRALFEEIKAQGLTPDV 586



 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 92/340 (27%), Positives = 164/340 (48%), Gaps = 35/340 (10%)

Query: 362 TYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQM 421
           +Y  ++ +L +A +  A  K+ D M   G  PN++T N +I    +A  L+EA  +F  +
Sbjct: 413 SYNILIDMLCKAGELEAALKVQDSMKEAGLFPNIITVNIMIDRLCKAQRLDEACSIFLGL 472

Query: 422 QVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHL 481
               C PD VT+C+LID   + G ++ A  +Y+KM  +G +P+   Y+ +I    K G  
Sbjct: 473 DHKVCTPDSVTFCSLIDGLGRHGKVNDAYMLYEKMLDSGQTPNAVVYTSLIRNFFKCGRK 532

Query: 482 QAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIV 541
           +  H+++ EM+++GC P+L+  N  +    KA   +    L+ +++  G  PD  +YSI+
Sbjct: 533 EDGHKIYKEMMHRGCSPDLMLLNNYMDCVFKAGEIEKGRALFEEIKAQGLTPDVRSYSIL 592

Query: 542 MEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGL 601
           +  L   G+  +   +F EM+ +    D   Y +++D + K+G V KA++  E M   GL
Sbjct: 593 IHGLVKGGFSKDTYKLFYEMKEQGLHLDTRAYNIVIDGFCKSGKVNKAYQLLEEMKTKGL 652

Query: 602 RP-----------------------------------NVPTCNSLLSAFLRVGQLSDAYH 626
           +P                                   NV   +SL+  F +VG++ +AY 
Sbjct: 653 QPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKAVDLNVVVYSSLIDGFGKVGRIDEAYL 712

Query: 627 LLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGFCHELM 666
           +L+ ++  GL P+  T+  LL    +A    +   C + M
Sbjct: 713 ILEELMQKGLTPNTYTWNCLLDALVKAEEIDEALVCFQNM 752



 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 118/456 (25%), Positives = 202/456 (44%), Gaps = 73/456 (16%)

Query: 342 VALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQ-------------------------- 375
           +A  FF+ L+ Q G   D+ T+T+M+G+L +A +                          
Sbjct: 290 MAWKFFHELKSQ-GLVPDDVTFTSMIGVLCKAERVDEAVELFEELDSNKSVPCVYAYNTM 348

Query: 376 ---FGAINK------LLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGC 426
              +G++ K      LL++  R GC P+V+ YN ++   GR   + EAL + + M++   
Sbjct: 349 IMGYGSVGKFNEAYSLLERQKRKGCIPSVIAYNCILTCLGRKGKVEEALRILEAMKM-DA 407

Query: 427 EPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQ 486
            P+  +Y  LID+  KAG L+ A+ +   M+ AGL P+  T +++I+ L KA  L  A  
Sbjct: 408 APNLTSYNILIDMLCKAGELEAALKVQDSMKEAGLFPNIITVNIMIDRLCKAQRLDEACS 467

Query: 487 LFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLG 546
           +F  + ++ C P+ VT+  +I    +      A  LY  M ++G  P+ V Y+ ++    
Sbjct: 468 IFLGLDHKVCTPDSVTFCSLIDGLGRHGKVNDAYMLYEKMLDSGQTPNAVVYTSLIRNFF 527

Query: 547 HCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVP 606
            CG  ++   ++ EM  +   PD  +    +D   KAG + K    +E +   GL P+V 
Sbjct: 528 KCGRKEDGHKIYKEMMHRGCSPDLMLLNNYMDCVFKAGEIEKGRALFEEIKAQGLTPDVR 587

Query: 607 TCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGFCHELM 666
           + + L+   ++ G   D Y L   M   GL    + Y +++            GFC    
Sbjct: 588 SYSILIHGLVKGGFSKDTYKLFYEMKEQGLHLDTRAYNIVID-----------GFCK--- 633

Query: 667 AVSG--HPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDR---------ESKRGLVD- 714
             SG  + A+  L  M + G     V    GS ++ +   DR         E+K   VD 
Sbjct: 634 --SGKVNKAYQLLEEMKTKGLQPTVVT--YGSVIDGLAKIDRLDEAYMLFEEAKSKAVDL 689

Query: 715 ------AVVDFLHKSGLKEEAGSVWEVAAQKNVYPD 744
                 +++D   K G  +EA  + E   QK + P+
Sbjct: 690 NVVVYSSLIDGFGKVGRIDEAYLILEELMQKGLTPN 725



 Score =  135 bits (339), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 76/273 (27%), Positives = 134/273 (49%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           ++ G   D   Y  ++    ++ +     +LL++M   G QP VVTY  +I    + + L
Sbjct: 613 KEQGLHLDTRAYNIVIDGFCKSGKVNKAYQLLEEMKTKGLQPTVVTYGSVIDGLAKIDRL 672

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
           +EA  +F++ +    + + V Y +LID   K G +D A  + +++   GL+P+T+T++ +
Sbjct: 673 DEAYMLFEEAKSKAVDLNVVVYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNTYTWNCL 732

Query: 472 INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF 531
           ++ L KA  +  A   F  M N  C PN VTY+IM+    K R +  A   +++MQ  G 
Sbjct: 733 LDALVKAEEIDEALVCFQNMKNLKCPPNEVTYSIMVNGLCKVRKFNKAFVFWQEMQKQGL 792

Query: 532 EPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWE 591
           +P+ +TY+ ++  L   G + EA+ +F   +    +PD   Y  +++    A     A+ 
Sbjct: 793 KPNTITYTTMISGLARVGNVLEAKDLFERFKSSGGIPDSACYNAMIEGLSNANKAMDAYI 852

Query: 592 WYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDA 624
            +E     G R    TC  LL A  +   L  A
Sbjct: 853 LFEETRLKGCRIYSKTCVVLLDALHKADCLEQA 885



 Score =  118 bits (295), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 75/303 (24%), Positives = 147/303 (48%), Gaps = 1/303 (0%)

Query: 345 GFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHS 404
             F  ++ Q G   D  +Y+ ++  L +        KL  +M   G   +   YN +I  
Sbjct: 572 ALFEEIKAQ-GLTPDVRSYSILIHGLVKGGFSKDTYKLFYEMKEQGLHLDTRAYNIVIDG 630

Query: 405 YGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPD 464
           + ++  +N+A  + ++M+  G +P  VTY ++ID  AK   LD A  ++++ ++  +  +
Sbjct: 631 FCKSGKVNKAYQLLEEMKTKGLQPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKAVDLN 690

Query: 465 TFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYR 524
              YS +I+  GK G +  A+ +  E++ +G  PN  T+N ++    KA     AL  ++
Sbjct: 691 VVVYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNTYTWNCLLDALVKAEEIDEALVCFQ 750

Query: 525 DMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAG 584
           +M+N    P++VTYSI++  L      ++A   + EM+++   P+   Y  ++    + G
Sbjct: 751 NMKNLKCPPNEVTYSIMVNGLCKVRKFNKAFVFWQEMQKQGLKPNTITYTTMISGLARVG 810

Query: 585 NVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYT 644
           NV +A + +E    +G  P+    N+++       +  DAY L +     G +   +T  
Sbjct: 811 NVLEAKDLFERFKSSGGIPDSACYNAMIEGLSNANKAMDAYILFEETRLKGCRIYSKTCV 870

Query: 645 LLL 647
           +LL
Sbjct: 871 VLL 873



 Score =  116 bits (290), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 74/285 (25%), Positives = 133/285 (46%), Gaps = 3/285 (1%)

Query: 377 GAINK---LLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTY 433
           G I K   L +++   G  P+V +Y+ LIH   +  +  +   +F +M+  G   D   Y
Sbjct: 565 GEIEKGRALFEEIKAQGLTPDVRSYSILIHGLVKGGFSKDTYKLFYEMKEQGLHLDTRAY 624

Query: 434 CTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVN 493
             +ID   K+G ++ A  + ++M+  GL P   TY  +I+ L K   L  A+ LF E  +
Sbjct: 625 NIVIDGFCKSGKVNKAYQLLEEMKTKGLQPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKS 684

Query: 494 QGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDE 553
           +    N+V Y+ +I    K      A  +  ++   G  P+  T++ +++ L     +DE
Sbjct: 685 KAVDLNVVVYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNTYTWNCLLDALVKAEEIDE 744

Query: 554 AEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLS 613
           A   F  M+     P+E  Y ++V+   K     KA+ +++ M + GL+PN  T  +++S
Sbjct: 745 ALVCFQNMKNLKCPPNEVTYSIMVNGLCKVRKFNKAFVFWQEMQKQGLKPNTITYTTMIS 804

Query: 614 AFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYD 658
              RVG + +A  L +   + G  P    Y  ++   + A    D
Sbjct: 805 GLARVGNVLEAKDLFERFKSSGGIPDSACYNAMIEGLSNANKAMD 849



 Score = 92.8 bits (229), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 54/202 (26%), Positives = 103/202 (50%)

Query: 362 TYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQM 421
            Y++++   G+  +      +L+++++ G  PN  T+N L+ +  +A  ++EAL  F+ M
Sbjct: 693 VYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNTYTWNCLLDALVKAEEIDEALVCFQNM 752

Query: 422 QVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHL 481
           + + C P+ VTY  +++   K    + A   +++MQ  GL P+T TY+ +I+ L + G++
Sbjct: 753 KNLKCPPNEVTYSIMVNGLCKVRKFNKAFVFWQEMQKQGLKPNTITYTTMISGLARVGNV 812

Query: 482 QAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIV 541
             A  LF    + G IP+   YN MI   + A     A  L+ + +  G      T  ++
Sbjct: 813 LEAKDLFERFKSSGGIPDSACYNAMIEGLSNANKAMDAYILFEETRLKGCRIYSKTCVVL 872

Query: 542 MEVLGHCGYLDEAEAVFAEMRR 563
           ++ L     L++A  V A +R 
Sbjct: 873 LDALHKADCLEQAAIVGAVLRE 894


>gi|9502386|gb|AAF88093.1|AC025417_21 T12C24.22 [Arabidopsis thaliana]
          Length = 1245

 Score =  156 bits (395), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 87/297 (29%), Positives = 158/297 (53%), Gaps = 4/297 (1%)

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
           + G++ D  T+ T++  L    +      L+D+MV +GCQP+VVTYN +++   R+   +
Sbjct: 141 KLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTS 200

Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
            ALD+ ++M+    + D  TY T+ID   + G +D A+ ++K+M+  G+     TY+ ++
Sbjct: 201 LALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLV 260

Query: 473 NCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFE 532
             L KAG       L  +MV++  +PN++T+N+++ +  K    Q A +LY++M   G  
Sbjct: 261 RGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGIS 320

Query: 533 PDKVTYSIVMEVLGHC--GYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAW 590
           P+ +TY+ +M+  G+C    L EA  +   M R    PD   +  L+  +     V    
Sbjct: 321 PNIITYNTLMD--GYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGM 378

Query: 591 EWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
           + +  + + GL  N  T + L+  F + G++  A  L Q M++ G+ P + TY +LL
Sbjct: 379 KVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILL 435



 Score =  139 bits (349), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 79/317 (24%), Positives = 158/317 (49%), Gaps = 8/317 (2%)

Query: 362 TYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQM 421
           T+  ++ +  +  +    N+L  +M+  G  PN++TYN L+  Y   N L+EA ++   M
Sbjct: 290 TFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLM 349

Query: 422 QVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHL 481
               C PD VT+ +LI  +     +D  M +++ +   GL  +  TYS+++    ++G +
Sbjct: 350 VRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKI 409

Query: 482 QAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIV 541
           + A +LF EMV+ G +P+++TY I++         + AL+++ D+Q +  +   V Y+ +
Sbjct: 410 KLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTI 469

Query: 542 MEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGL 601
           +E +   G +++A  +F  +  K   P+   Y +++    K G++ +A      M + G 
Sbjct: 470 IEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGN 529

Query: 602 RPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGF 661
            PN  T N+L+ A LR G L+ +  L++ M + G      +  +++     A     + +
Sbjct: 530 APNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDMLLSAMKRLTLRY 589

Query: 662 C--------HELMAVSG 670
           C         +L+ +SG
Sbjct: 590 CLSKGSKSRQDLLELSG 606



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 81/309 (26%), Positives = 154/309 (49%), Gaps = 11/309 (3%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           G  H+ +T   M+    R  +      +L ++++ G +P+  T+N LI        ++EA
Sbjct: 108 GIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEA 167

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
           + +  +M   GC+PD VTY ++++   ++G   +A+D+ +KM+   +  D FTYS II+ 
Sbjct: 168 VVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDS 227

Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPD 534
           L + G + AA  LF EM  +G   ++VTYN ++    KA  +     L +DM +    P+
Sbjct: 228 LCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPN 287

Query: 535 KVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYE 594
            +T++++++V    G L EA  ++ EM  +   P+   Y  L+D +     + +A    +
Sbjct: 288 VITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLD 347

Query: 595 AMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEAR 654
            M++    P++ T  SL+  +  V ++ D   + + +   GL  +  TY++L+       
Sbjct: 348 LMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQ------ 401

Query: 655 SPYDMGFCH 663
                GFC 
Sbjct: 402 -----GFCQ 405



 Score =  132 bits (332), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 89/329 (27%), Positives = 164/329 (49%), Gaps = 4/329 (1%)

Query: 322 NYSMDAYQANQVLKQL-QDHTV--ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGA 378
           N   D +  + ++  L +D  +  A+  F  +  + G K    TY ++V  L +A ++  
Sbjct: 213 NVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETK-GIKSSVVTYNSLVRGLCKAGKWND 271

Query: 379 INKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLID 438
              LL  MV     PNV+T+N L+  + +   L EA +++K+M   G  P+ +TY TL+D
Sbjct: 272 GALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMD 331

Query: 439 IHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIP 498
            +     L  A +M   M     SPD  T++ +I        +    ++F  +  +G + 
Sbjct: 332 GYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVA 391

Query: 499 NLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVF 558
           N VTY+I++    ++   + A +L+++M + G  PD +TY I+++ L   G L++A  +F
Sbjct: 392 NAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIF 451

Query: 559 AEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRV 618
            ++++        +Y  +++   K G V  AW  + ++   G++PNV T   ++S   + 
Sbjct: 452 EDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKK 511

Query: 619 GQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
           G LS+A  LL+ M   G  P+  TY  L+
Sbjct: 512 GSLSEANILLRKMEEDGNAPNDCTYNTLI 540



 Score =  124 bits (310), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 72/285 (25%), Positives = 142/285 (49%)

Query: 363 YTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQ 422
           ++     + R +QF  +     Q+  +G   N+ T N +I+ + R      A  V  ++ 
Sbjct: 81  FSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVM 140

Query: 423 VVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQ 482
            +G EPD  T+ TLI      G +  A+ +  +M   G  PD  TY+ I+N + ++G   
Sbjct: 141 KLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTS 200

Query: 483 AAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVM 542
            A  L  +M  +    ++ TY+ +I    +     +A+ L+++M+  G +   VTY+ ++
Sbjct: 201 LALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLV 260

Query: 543 EVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLR 602
             L   G  ++   +  +M  +  VP+   + +L+D++ K G +++A E Y+ M+  G+ 
Sbjct: 261 RGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGIS 320

Query: 603 PNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
           PN+ T N+L+  +    +LS+A ++L  M+     P + T+T L+
Sbjct: 321 PNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLI 365



 Score =  123 bits (308), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 81/274 (29%), Positives = 130/274 (47%), Gaps = 1/274 (0%)

Query: 382 LLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHA 441
           L  +M+R    P++V ++R   +  R    N  LD  KQ+++ G   +  T   +I+   
Sbjct: 65  LFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMINCFC 124

Query: 442 KAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLV 501
           +      A  +  K+   G  PDT T++ +I  L   G +  A  L   MV  GC P++V
Sbjct: 125 RCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVV 184

Query: 502 TYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEM 561
           TYN ++    ++ +   AL L R M+    + D  TYS +++ L   G +D A ++F EM
Sbjct: 185 TYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEM 244

Query: 562 RRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQL 621
             K        Y  LV    KAG         + M+   + PNV T N LL  F++ G+L
Sbjct: 245 ETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKL 304

Query: 622 SDAYHLLQGMLNLGLKPSLQTY-TLLLSCCTEAR 654
            +A  L + M+  G+ P++ TY TL+   C + R
Sbjct: 305 QEANELYKEMITRGISPNIITYNTLMDGYCMQNR 338



 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 49/236 (20%), Positives = 102/236 (43%), Gaps = 35/236 (14%)

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
           ++A+ +F++M      P  V +       A+    ++ +D  K+++  G++ + +T +++
Sbjct: 60  DDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIM 119

Query: 472 INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF 531
           INC             FC      C      Y+++             +KL       G+
Sbjct: 120 INC-------------FCR-----CCKTCFAYSVL----------GKVMKL-------GY 144

Query: 532 EPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWE 591
           EPD  T++ +++ L   G + EA  +   M      PD   Y  +V+   ++G+   A +
Sbjct: 145 EPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALD 204

Query: 592 WYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
               M +  ++ +V T ++++ +  R G +  A  L + M   G+K S+ TY  L+
Sbjct: 205 LLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLV 260



 Score = 57.0 bits (136), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 71/299 (23%), Positives = 123/299 (41%), Gaps = 45/299 (15%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           G K +  TYT M+  L +       N LL +M  DG  PN  TYN LI ++ R   L  +
Sbjct: 493 GVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTAS 552

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
             + ++M+  G   D  +   +ID+   A        M +      LS  + +   ++  
Sbjct: 553 AKLIEEMKSCGFSADASSIKMVIDMLLSA--------MKRLTLRYCLSKGSKSRQDLLE- 603

Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPD 534
           L  +  ++ +   F +M     I   +  N +     +AR   SA +L RD++       
Sbjct: 604 LSGSEKIRLSSLTFVKMFPCNTITTSLNVNTI-----EARGMNSA-ELNRDLR------- 650

Query: 535 KVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDL---------WGKAGN 585
           K+  S V++      + +    V        W  ++    L+VDL           +AG 
Sbjct: 651 KLRRSSVLK-----KFKNRDVRVLVTNELLTWGLEDAECDLMVDLELPTDAVHYAHRAGR 705

Query: 586 VRK---------AWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLG 635
           +R+         A E ++ M+Q G+ PN  T +SL+  F +  +L +A  +L  M+  G
Sbjct: 706 MRRPGRKMTVVTAEELHKEMIQRGIAPNTITYSSLIDGFCKENRLDEANQMLDLMVTKG 764


>gi|15231863|ref|NP_190938.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75174107|sp|Q9LFF1.1|PP281_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At3g53700, chloroplastic; AltName: Full=Protein MATERNAL
           EFFECT EMBRYO ARREST 40; Flags: Precursor
 gi|6729521|emb|CAB67677.1| putative protein [Arabidopsis thaliana]
 gi|15982931|gb|AAL09812.1| AT3g53700/F4P12_400 [Arabidopsis thaliana]
 gi|332645608|gb|AEE79129.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 754

 Score =  156 bits (395), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 94/313 (30%), Positives = 158/313 (50%), Gaps = 1/313 (0%)

Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLI 402
           AL F   +  Q GF  D++T+ T+V  L +A       +++D M+++G  P+V TYN +I
Sbjct: 278 ALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVI 337

Query: 403 HSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLS 462
               +   + EA++V  QM    C P+ VTY TLI    K   ++ A ++ + + + G+ 
Sbjct: 338 SGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGIL 397

Query: 463 PDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKL 522
           PD  T++ +I  L    + + A +LF EM ++GC P+  TYN++I           AL +
Sbjct: 398 PDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNM 457

Query: 523 YRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGK 582
            + M+ +G     +TY+ +++         EAE +F EM       +   Y  L+D   K
Sbjct: 458 LKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCK 517

Query: 583 AGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQT 642
           +  V  A +  + M+  G +P+  T NSLL+ F R G +  A  ++Q M + G +P + T
Sbjct: 518 SRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVT 577

Query: 643 Y-TLLLSCCTEAR 654
           Y TL+   C   R
Sbjct: 578 YGTLISGLCKAGR 590



 Score =  143 bits (361), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 95/331 (28%), Positives = 163/331 (49%), Gaps = 38/331 (11%)

Query: 355 GFKHDEHTYTT-MVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNE 413
           G   DE T+TT M G +      GA+ ++ +QMV  GC  + V+ N ++H + +   + +
Sbjct: 219 GLVPDEKTFTTVMQGYIEEGDLDGAL-RIREQMVEFGCSWSNVSVNVIVHGFCKEGRVED 277

Query: 414 ALDVFKQM-QVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
           AL+  ++M    G  PD+ T+ TL++   KAG +  A+++   M   G  PD +TY+ +I
Sbjct: 278 ALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVI 337

Query: 473 NCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAK-------------------- 512
           + L K G ++ A ++  +M+ + C PN VTYN +I+   K                    
Sbjct: 338 SGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGIL 397

Query: 513 ---------------ARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAV 557
                           RN++ A++L+ +M++ G EPD+ TY+++++ L   G LDEA  +
Sbjct: 398 PDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNM 457

Query: 558 FAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLR 617
             +M           Y  L+D + KA   R+A E ++ M   G+  N  T N+L+    +
Sbjct: 458 LKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCK 517

Query: 618 VGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
             ++ DA  L+  M+  G KP   TY  LL+
Sbjct: 518 SRRVEDAAQLMDQMIMEGQKPDKYTYNSLLT 548



 Score =  136 bits (343), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 90/321 (28%), Positives = 144/321 (44%), Gaps = 35/321 (10%)

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
           Q G+  D +TY +++  L +  +     ++LDQM+   C PN VTYN LI +  + N + 
Sbjct: 323 QEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVE 382

Query: 413 EA-----------------------------------LDVFKQMQVVGCEPDRVTYCTLI 437
           EA                                   +++F++M+  GCEPD  TY  LI
Sbjct: 383 EATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLI 442

Query: 438 DIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCI 497
           D     G LD A++M K+M+ +G +    TY+ +I+   KA   + A ++F EM   G  
Sbjct: 443 DSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVS 502

Query: 498 PNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAV 557
            N VTYN +I    K+R  + A +L   M   G +PDK TY+ ++      G + +A  +
Sbjct: 503 RNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADI 562

Query: 558 FAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLR 617
              M      PD   YG L+    KAG V  A +   ++   G+       N ++    R
Sbjct: 563 VQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPHAYNPVIQGLFR 622

Query: 618 VGQLSDAYHLLQGMLNLGLKP 638
             + ++A +L + ML     P
Sbjct: 623 KRKTTEAINLFREMLEQNEAP 643



 Score =  132 bits (331), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 89/305 (29%), Positives = 147/305 (48%), Gaps = 19/305 (6%)

Query: 338 QDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVT 397
           ++H VA+  F  +R + G + DE TY  ++  L    +      +L QM   GC  +V+T
Sbjct: 414 RNHRVAMELFEEMRSK-GCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVIT 472

Query: 398 YNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQ 457
           YN LI  + +AN   EA ++F +M+V G   + VTY TLID   K+  ++ A  +  +M 
Sbjct: 473 YNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMI 532

Query: 458 AAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQ 517
             G  PD +TY+ ++    + G ++ A  +   M + GC P++VTY  +I+   KA   +
Sbjct: 533 MEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVE 592

Query: 518 SALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLV 577
            A KL R +Q  G       Y+ V++ L       EA  +F EM  +N  P + V   +V
Sbjct: 593 VASKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAPPDAVSYRIV 652

Query: 578 --DLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLG 635
              L    G +R+A ++   +L+ G  P                + S  Y L +G+L L 
Sbjct: 653 FRGLCNGGGPIREAVDFLVELLEKGFVP----------------EFSSLYMLAEGLLTLS 696

Query: 636 LKPSL 640
           ++ +L
Sbjct: 697 MEETL 701



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 86/322 (26%), Positives = 156/322 (48%), Gaps = 3/322 (0%)

Query: 334 LKQLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQP 393
           L+   D + AL  FN   ++  F  +   Y  ++  LGR+  F  + K+L+ M    C+ 
Sbjct: 57  LRSQPDDSAALRLFNLASKKPNFSPEPALYEEILLRLGRSGSFDDMKKILEDMKSSRCEM 116

Query: 394 NVVTYNRLIHSYGRANYLNEALDVFKQM-QVVGCEPDRVTYCTLIDIHAKAGFLDVAMDM 452
              T+  LI SY +    +E L V   M    G +PD   Y  ++++      L +    
Sbjct: 117 GTSTFLILIESYAQFELQDEILSVVDWMIDEFGLKPDTHFYNRMLNLLVDGNSLKLVEIS 176

Query: 453 YKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAK 512
           + KM   G+ PD  T++V+I  L +A  L+ A  +  +M + G +P+  T+  ++    +
Sbjct: 177 HAKMSVWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIE 236

Query: 513 ARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKN-WVPDEP 571
             +   AL++   M   G     V+ ++++      G +++A     EM  ++ + PD+ 
Sbjct: 237 EGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQY 296

Query: 572 VYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGM 631
            +  LV+   KAG+V+ A E  + MLQ G  P+V T NS++S   ++G++ +A  +L  M
Sbjct: 297 TFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQM 356

Query: 632 LNLGLKPSLQTY-TLLLSCCTE 652
           +     P+  TY TL+ + C E
Sbjct: 357 ITRDCSPNTVTYNTLISTLCKE 378


>gi|222636757|gb|EEE66889.1| hypothetical protein OsJ_23712 [Oryza sativa Japonica Group]
          Length = 579

 Score =  156 bits (395), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 117/444 (26%), Positives = 199/444 (44%), Gaps = 49/444 (11%)

Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLI 402
           AL  F  +++ A  + +  TY  ++ +L    +     ++LD+M      PN++T N ++
Sbjct: 107 ALSLFEVMKKDA--EPNSSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMV 164

Query: 403 HSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLS 462
               +A  L EA  +F+     GC PD VTYC+LID   K G +D A  +++KM  AG +
Sbjct: 165 DRLCKARKLEEAYKIFESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHN 224

Query: 463 PDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKL 522
            +   Y+ +I      G  +  H++F E++ +GC P+L   N  +    KA   +    +
Sbjct: 225 ANPVVYTSLIRNFFIHGRKEDGHKIFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMI 284

Query: 523 YRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGK 582
           + D+++ GF PD  +YSI++  L   G   E   +F  M+++ +  D   Y  +VD + K
Sbjct: 285 FEDIRSYGFLPDVRSYSILIHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCK 344

Query: 583 AGNVRKAWEWYEAMLQAGLRPNVPT----------------------------------- 607
           +G V KA+E  E M +  ++P V T                                   
Sbjct: 345 SGKVHKAYEILEEMKEKCVQPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVL 404

Query: 608 CNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGFCHELMA 667
            +SL+  F +VG++ +AY +L+ M+  GL P++ T+  LL    +A    +   C + M 
Sbjct: 405 YSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMK 464

Query: 668 VSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRESKRGLVDAVVDF------LH 721
               P + +  S+   G       +    F + M       K+GLV  VV +      L 
Sbjct: 465 EMKCPPNTYTYSILINGLCRVQKYNKAFVFWQDMQ------KQGLVPNVVTYTTMISGLA 518

Query: 722 KSGLKEEAGSVWEVAAQKNVYPDA 745
           K G   +A S++E        PDA
Sbjct: 519 KVGNITDAYSLFERFKANGGIPDA 542



 Score =  145 bits (366), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 100/405 (24%), Positives = 190/405 (46%), Gaps = 2/405 (0%)

Query: 342 VALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRL 401
           +A  FF+ L+ Q G K D+ +YT+M+ +L +A + G   +L  QM  +   P    YN +
Sbjct: 1   MAWKFFHELKAQ-GLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTM 59

Query: 402 IHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGL 461
           I  YG A    +A  + ++++  GC P  V++ +++    K   +D A+ +++ M+    
Sbjct: 60  IMGYGSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLFEVMKKDA- 118

Query: 462 SPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALK 521
            P++ TY++II+ L   G ++ A+++  EM +    PNL+T NIM+    KAR  + A K
Sbjct: 119 EPNSSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYK 178

Query: 522 LYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWG 581
           ++      G  PD VTY  +++ LG  G +DEA  +F +M       +  VY  L+  + 
Sbjct: 179 IFESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFF 238

Query: 582 KAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQ 641
             G      + ++ +++ G +P++   N+ +    + G++     + + + + G  P ++
Sbjct: 239 IHGRKEDGHKIFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVR 298

Query: 642 TYTLLLSCCTEARSPYDMGFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMM 701
           +Y++L+   T+A    +       M   G        +    G             LE M
Sbjct: 299 SYSILIHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEM 358

Query: 702 HSEDRESKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAV 746
             +  +       A+VD L K    +EA  ++E A  K +  + V
Sbjct: 359 KEKCVQPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVV 403



 Score =  120 bits (301), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 68/244 (27%), Positives = 122/244 (50%), Gaps = 3/244 (1%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           +Q GF  D   Y  +V    ++ +     ++L++M     QP V TY  ++    + + L
Sbjct: 324 KQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGAIVDGLAKIDRL 383

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
           +EA  +F++ +  G E + V Y +LID   K G +D A  + ++M   GL+P+ +T++ +
Sbjct: 384 DEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSL 443

Query: 472 INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF 531
           ++ L KA  +  A   F  M    C PN  TY+I+I    + + Y  A   ++DMQ  G 
Sbjct: 444 LDALVKAEEINEALVCFQSMKEMKCPPNTYTYSILINGLCRVQKYNKAFVFWQDMQKQGL 503

Query: 532 EPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWE 591
            P+ VTY+ ++  L   G + +A ++F   +    +PD   +  L++      N  +A E
Sbjct: 504 VPNVVTYTTMISGLAKVGNITDAYSLFERFKANGGIPDAASFNALIE---GMSNANRAME 560

Query: 592 WYEA 595
            Y+A
Sbjct: 561 AYQA 564



 Score =  112 bits (281), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 65/275 (23%), Positives = 134/275 (48%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           R  GF  D  +Y+ ++  L +A Q    + +   M + G   +   YN ++  + ++  +
Sbjct: 289 RSYGFLPDVRSYSILIHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKV 348

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
           ++A ++ ++M+    +P   TY  ++D  AK   LD A  ++++ ++ G+  +   YS +
Sbjct: 349 HKAYEILEEMKEKCVQPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSL 408

Query: 472 INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF 531
           I+  GK G +  A+ +  EM+ +G  PN+ T+N ++    KA     AL  ++ M+    
Sbjct: 409 IDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKEMKC 468

Query: 532 EPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWE 591
            P+  TYSI++  L      ++A   + +M+++  VP+   Y  ++    K GN+  A+ 
Sbjct: 469 PPNTYTYSILINGLCRVQKYNKAFVFWQDMQKQGLVPNVVTYTTMISGLAKVGNITDAYS 528

Query: 592 WYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYH 626
            +E     G  P+  + N+L+       +  +AY 
Sbjct: 529 LFERFKANGGIPDAASFNALIEGMSNANRAMEAYQ 563



 Score =  110 bits (274), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 76/303 (25%), Positives = 140/303 (46%), Gaps = 2/303 (0%)

Query: 346 FFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSY 405
           F   +RR  G K D     T +  + +A +      + + +   G  P+V +Y+ LIH  
Sbjct: 250 FKELIRR--GCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGL 307

Query: 406 GRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDT 465
            +A    E  ++F  M+  G   D   Y  ++D   K+G +  A ++ ++M+   + P  
Sbjct: 308 TKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTV 367

Query: 466 FTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRD 525
            TY  I++ L K   L  A+ LF E  ++G   N+V Y+ +I    K      A  +  +
Sbjct: 368 ATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEE 427

Query: 526 MQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGN 585
           M   G  P+  T++ +++ L     ++EA   F  M+     P+   Y +L++   +   
Sbjct: 428 MMKKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKEMKCPPNTYTYSILINGLCRVQK 487

Query: 586 VRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTL 645
             KA+ +++ M + GL PNV T  +++S   +VG ++DAY L +     G  P   ++  
Sbjct: 488 YNKAFVFWQDMQKQGLVPNVVTYTTMISGLAKVGNITDAYSLFERFKANGGIPDAASFNA 547

Query: 646 LLS 648
           L+ 
Sbjct: 548 LIE 550


>gi|302774715|ref|XP_002970774.1| hypothetical protein SELMODRAFT_94312 [Selaginella moellendorffii]
 gi|300161485|gb|EFJ28100.1| hypothetical protein SELMODRAFT_94312 [Selaginella moellendorffii]
          Length = 497

 Score =  156 bits (394), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 88/286 (30%), Positives = 153/286 (53%)

Query: 362 TYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQM 421
           TY+ ++  L +A +     +LL+ M   GC P+V+TY  L+    + + +  A +V ++M
Sbjct: 115 TYSVLIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAAWEVLREM 174

Query: 422 QVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHL 481
              GC P+ VTY +L+    +A  +  A+ + + M   G +P+  TY  +I+ L K G +
Sbjct: 175 LDAGCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGRV 234

Query: 482 QAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIV 541
           + A  +  +M+++G  P+L+ YN++I    KA     ++ L R   + G +PD VTYS V
Sbjct: 235 KDACAMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGGIKPDVVTYSSV 294

Query: 542 MEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGL 601
           +  L     LDEA  +   ++ +   PD  +Y  L+D   KAG V +A++ YE M   G 
Sbjct: 295 IYGLCRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDLYEVMTGDGC 354

Query: 602 RPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
             +V T ++L+    + G++ +A+ LL  M+ +G  PS  TY  L+
Sbjct: 355 DADVVTYSTLIDGLCKAGRVDEAHLLLARMVRMGTPPSTMTYNSLI 400



 Score =  152 bits (385), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 119/434 (27%), Positives = 207/434 (47%), Gaps = 19/434 (4%)

Query: 362 TYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQM 421
           TY T++  L R  +      L  +M+ D    +V+++N L+    RA  +  AL+ F++M
Sbjct: 47  TYNTLLDGLFRTGKLERAMALFQEML-DRRSHDVISFNILVTGLCRAGKIETALEFFRKM 105

Query: 422 QVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHL 481
               C P+ +TY  LID   KA  +  A+++ + M+A G SPD  TY+++++ L K   +
Sbjct: 106 DD-RCSPNVITYSVLIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKV 164

Query: 482 QAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIV 541
            AA ++  EM++ GC+PNLVTYN ++    +AR    AL L RDM   G  P+ VTY  +
Sbjct: 165 AAAWEVLREMLDAGCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTL 224

Query: 542 MEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGL 601
           ++ L   G + +A A+ A+M  K   PD  +Y +L++   KA  V ++       +  G+
Sbjct: 225 IDGLCKVGRVKDACAMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGGI 284

Query: 602 RPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGF 661
           +P+V T +S++    R  +L +A  LL  + + G  P +  Y+ L+    +A    +   
Sbjct: 285 KPDVVTYSSVIYGLCRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFD 344

Query: 662 CHELMAVSGHPAHMFLLSMPSPG--PDGQNVRDH--VGSFLEMMHSEDRESKRGLVDAVV 717
            +E+M   G  A +   S    G    G+    H  +   + M       +   L+  + 
Sbjct: 345 LYEVMTGDGCDADVVTYSTLIDGLCKAGRVDEAHLLLARMVRMGTPPSTMTYNSLIKGLC 404

Query: 718 DFLHKSGLKEEAGSVWEVAAQKNVYPDAVKEKGMSYWLINLHVMSDGTAVIALSRTLAWF 777
           D  H     +EA  + E   + N  P AV    + + +  +  +         S  L +F
Sbjct: 405 DLNH----LDEAIELVEEMERSNCAPSAVTYNILIHGMCRMERVD--------SAALDYF 452

Query: 778 RKQMLISGVGPSRI 791
            ++M+ +GV P  I
Sbjct: 453 -QEMIDNGVIPDHI 465



 Score =  147 bits (370), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 95/293 (32%), Positives = 147/293 (50%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           G   D  TYT +V  L +  +  A  ++L +M+  GC PN+VTYN L+H   RA  +++A
Sbjct: 143 GCSPDVITYTILVDGLCKESKVAAAWEVLREMLDAGCVPNLVTYNSLLHGLCRARRVSDA 202

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
           L + + M   GC P+ VTY TLID   K G +  A  M   M   G +PD   Y+++IN 
Sbjct: 203 LALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVKDACAMLADMIDKGGTPDLMIYNMLING 262

Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPD 534
           L KA  +  +  L    V+ G  P++VTY+ +I    ++     A +L   +++ G  PD
Sbjct: 263 LCKADQVDESIALLRRAVSGGIKPDVVTYSSVIYGLCRSNRLDEACRLLLYVKSRGCPPD 322

Query: 535 KVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYE 594
            + YS +++ L   G +DEA  ++  M       D   Y  L+D   KAG V +A     
Sbjct: 323 VILYSTLIDGLCKAGKVDEAFDLYEVMTGDGCDADVVTYSTLIDGLCKAGRVDEAHLLLA 382

Query: 595 AMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
            M++ G  P+  T NSL+     +  L +A  L++ M      PS  TY +L+
Sbjct: 383 RMVRMGTPPSTMTYNSLIKGLCDLNHLDEAIELVEEMERSNCAPSAVTYNILI 435



 Score =  141 bits (355), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 109/362 (30%), Positives = 174/362 (48%), Gaps = 5/362 (1%)

Query: 387 VRD-GCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGF 445
           +RD GC+PNVVTYN LI    + N  + A ++F+ M+ V C P  VTY TL+D   + G 
Sbjct: 1   MRDHGCEPNVVTYNSLIDGLCKNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGK 60

Query: 446 LDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNI 505
           L+ AM ++++M     S D  ++++++  L +AG ++ A + F +M ++ C PN++TY++
Sbjct: 61  LERAMALFQEMLDRR-SHDVISFNILVTGLCRAGKIETALEFFRKMDDR-CSPNVITYSV 118

Query: 506 MIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKN 565
           +I    KA     A++L   M+  G  PD +TY+I+++ L     +  A  V  EM    
Sbjct: 119 LIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAAWEVLREMLDAG 178

Query: 566 WVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAY 625
            VP+   Y  L+    +A  V  A      M   G  PNV T  +L+    +VG++ DA 
Sbjct: 179 CVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVKDAC 238

Query: 626 HLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGFCHELMAVSGH-PAHMFLLSMPSPG 684
            +L  M++ G  P L  Y +L++   +A    D        AVSG     +   S    G
Sbjct: 239 AMLADMIDKGGTPDLMIYNMLINGLCKA-DQVDESIALLRRAVSGGIKPDVVTYSSVIYG 297

Query: 685 PDGQNVRDHVGSFLEMMHSEDRESKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPD 744
               N  D     L  + S        L   ++D L K+G  +EA  ++EV        D
Sbjct: 298 LCRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDLYEVMTGDGCDAD 357

Query: 745 AV 746
            V
Sbjct: 358 VV 359



 Score =  130 bits (328), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 87/287 (30%), Positives = 140/287 (48%), Gaps = 1/287 (0%)

Query: 362 TYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQM 421
           TY +++  L RAR+      L+  M   GC PNVVTY  LI    +   + +A  +   M
Sbjct: 185 TYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVKDACAMLADM 244

Query: 422 QVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHL 481
              G  PD + Y  LI+   KA  +D ++ + ++  + G+ PD  TYS +I  L ++  L
Sbjct: 245 IDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGGIKPDVVTYSSVIYGLCRSNRL 304

Query: 482 QAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIV 541
             A +L   + ++GC P+++ Y+ +I    KA     A  LY  M   G + D VTYS +
Sbjct: 305 DEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDLYEVMTGDGCDADVVTYSTL 364

Query: 542 MEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGL 601
           ++ L   G +DEA  + A M R    P    Y  L+       ++ +A E  E M ++  
Sbjct: 365 IDGLCKAGRVDEAHLLLARMVRMGTPPSTMTYNSLIKGLCDLNHLDEAIELVEEMERSNC 424

Query: 602 RPNVPTCNSLLSAFLRVGQL-SDAYHLLQGMLNLGLKPSLQTYTLLL 647
            P+  T N L+    R+ ++ S A    Q M++ G+ P   TY++LL
Sbjct: 425 APSAVTYNILIHGMCRMERVDSAALDYFQEMIDNGVIPDHITYSILL 471



 Score =  121 bits (303), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 80/220 (36%), Positives = 118/220 (53%), Gaps = 13/220 (5%)

Query: 329 QANQVLKQLQDHTVALGFFNWLRR--QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQM 386
           +A+QV     D ++AL     LRR    G K D  TY++++  L R+ +     +LL  +
Sbjct: 265 KADQV-----DESIAL-----LRRAVSGGIKPDVVTYSSVIYGLCRSNRLDEACRLLLYV 314

Query: 387 VRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFL 446
              GC P+V+ Y+ LI    +A  ++EA D+++ M   GC+ D VTY TLID   KAG +
Sbjct: 315 KSRGCPPDVILYSTLIDGLCKAGKVDEAFDLYEVMTGDGCDADVVTYSTLIDGLCKAGRV 374

Query: 447 DVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIM 506
           D A  +  +M   G  P T TY+ +I  L    HL  A +L  EM    C P+ VTYNI+
Sbjct: 375 DEAHLLLARMVRMGTPPSTMTYNSLIKGLCDLNHLDEAIELVEEMERSNCAPSAVTYNIL 434

Query: 507 IALQAKARNYQS-ALKLYRDMQNAGFEPDKVTYSIVMEVL 545
           I    +     S AL  +++M + G  PD +TYSI++E L
Sbjct: 435 IHGMCRMERVDSAALDYFQEMIDNGVIPDHITYSILLEGL 474



 Score = 77.0 bits (188), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 48/143 (33%), Positives = 79/143 (55%), Gaps = 2/143 (1%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           G   D  TY+T++  L +A +    + LL +MVR G  P+ +TYN LI      N+L+EA
Sbjct: 353 GCDADVVTYSTLIDGLCKAGRVDEAHLLLARMVRMGTPPSTMTYNSLIKGLCDLNHLDEA 412

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLD-VAMDMYKKMQAAGLSPDTFTYSVIIN 473
           +++ ++M+   C P  VTY  LI    +   +D  A+D +++M   G+ PD  TYS+++ 
Sbjct: 413 IELVEEMERSNCAPSAVTYNILIHGMCRMERVDSAALDYFQEMIDNGVIPDHITYSILLE 472

Query: 474 CLGKAGHL-QAAHQLFCEMVNQG 495
            L K+  L +  H +  +MV  G
Sbjct: 473 GLKKSKDLHELRHLVLDQMVQLG 495


>gi|225451367|ref|XP_002263590.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g09680 [Vitis vinifera]
 gi|296087085|emb|CBI33459.3| unnamed protein product [Vitis vinifera]
          Length = 592

 Score =  156 bits (394), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 86/264 (32%), Positives = 147/264 (55%)

Query: 384 DQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKA 443
           ++++  G  P+V  +N L+H   + + +NEA  +F ++   G  P  V++ TLI+ + K+
Sbjct: 214 EEILDCGYPPDVCKFNVLMHRLCKEHKINEAQLLFGEIGKRGLRPTVVSFNTLINGYCKS 273

Query: 444 GFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTY 503
           G LD    + + M    + PD FTYSV+IN L K G L  A++LF EM ++G +PN VT+
Sbjct: 274 GNLDQGFRLKRFMMENRVFPDVFTYSVLINGLCKEGQLDDANKLFLEMCDRGLVPNDVTF 333

Query: 504 NIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRR 563
             +I            +++Y+ M   G +PD +TY+ ++  L   G L EA+ +  EM +
Sbjct: 334 TTLINGHCVTGRADLGMEIYQQMLRKGVKPDVITYNTLINGLCKVGDLREAKKLVIEMTQ 393

Query: 564 KNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSD 623
           +   PD+  Y +L+D   K G++  A E  + M++ G+  +     +L+S F R GQ+ +
Sbjct: 394 RGLKPDKFTYTMLIDGCCKEGDLESALEIRKEMVKEGIELDNVAFTALISGFCREGQVIE 453

Query: 624 AYHLLQGMLNLGLKPSLQTYTLLL 647
           A   L+ ML  G+KP   TYT+++
Sbjct: 454 AERTLREMLEAGIKPDDATYTMVI 477



 Score =  155 bits (393), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 109/374 (29%), Positives = 188/374 (50%), Gaps = 9/374 (2%)

Query: 291 FASTGNVVESVSRI-LRQWKWGPLAEEALGNTNYSMDAYQANQVLKQL-QDHTV--ALGF 346
           F S G + + + ++ L    W    EE L +  Y  D  + N ++ +L ++H +  A   
Sbjct: 190 FHSCGYLFDRLMKLNLTSPAWA-FYEEIL-DCGYPPDVCKFNVLMHRLCKEHKINEAQLL 247

Query: 347 FNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYG 406
           F  + ++ G +    ++ T++    ++       +L   M+ +   P+V TY+ LI+   
Sbjct: 248 FGEIGKR-GLRPTVVSFNTLINGYCKSGNLDQGFRLKRFMMENRVFPDVFTYSVLINGLC 306

Query: 407 RANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTF 466
           +   L++A  +F +M   G  P+ VT+ TLI+ H   G  D+ M++Y++M   G+ PD  
Sbjct: 307 KEGQLDDANKLFLEMCDRGLVPNDVTFTTLINGHCVTGRADLGMEIYQQMLRKGVKPDVI 366

Query: 467 TYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDM 526
           TY+ +IN L K G L+ A +L  EM  +G  P+  TY ++I    K  + +SAL++ ++M
Sbjct: 367 TYNTLINGLCKVGDLREAKKLVIEMTQRGLKPDKFTYTMLIDGCCKEGDLESALEIRKEM 426

Query: 527 QNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNV 586
              G E D V ++ ++      G + EAE    EM      PD+  Y +++  + K G+V
Sbjct: 427 VKEGIELDNVAFTALISGFCREGQVIEAERTLREMLEAGIKPDDATYTMVIHGFCKKGDV 486

Query: 587 RKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLL 646
           +  ++  + M   G  P V T N LL+   + GQ+ +A  LL  MLNLG+ P   TY +L
Sbjct: 487 KTGFKLLKEMQCDGHVPGVVTYNVLLNGLCKQGQMKNANMLLDAMLNLGVVPDDITYNIL 546

Query: 647 LS--CCTEARSPYD 658
           L   C    R  +D
Sbjct: 547 LEGHCKHGNREDFD 560



 Score =  135 bits (340), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 93/329 (28%), Positives = 153/329 (46%), Gaps = 20/329 (6%)

Query: 344 LGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMV---------------- 387
           L FF WL  Q  F+   H+Y TM   L   +       LL  +V                
Sbjct: 87  LSFFKWLSTQHHFRLSIHSYCTMTHFLCTHKMLSEAQSLLQFVVSRKGKNSASSVFTSVL 146

Query: 388 --RDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGF 445
             R   Q N+V ++ L+++Y  + Y ++A+  F+ ++    +    +   L D   K   
Sbjct: 147 EARGTHQSNLV-FSVLMNAYTDSGYFSDAIQCFRLVRKHNLQIPFHSCGYLFDRLMKLNL 205

Query: 446 LDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNI 505
              A   Y+++   G  PD   ++V+++ L K   +  A  LF E+  +G  P +V++N 
Sbjct: 206 TSPAWAFYEEILDCGYPPDVCKFNVLMHRLCKEHKINEAQLLFGEIGKRGLRPTVVSFNT 265

Query: 506 MIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKN 565
           +I    K+ N     +L R M      PD  TYS+++  L   G LD+A  +F EM  + 
Sbjct: 266 LINGYCKSGNLDQGFRLKRFMMENRVFPDVFTYSVLINGLCKEGQLDDANKLFLEMCDRG 325

Query: 566 WVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAY 625
            VP++  +  L++     G      E Y+ ML+ G++P+V T N+L++   +VG L +A 
Sbjct: 326 LVPNDVTFTTLINGHCVTGRADLGMEIYQQMLRKGVKPDVITYNTLINGLCKVGDLREAK 385

Query: 626 HLLQGMLNLGLKPSLQTYTLLLS-CCTEA 653
            L+  M   GLKP   TYT+L+  CC E 
Sbjct: 386 KLVIEMTQRGLKPDKFTYTMLIDGCCKEG 414



 Score = 89.7 bits (221), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 51/170 (30%), Positives = 86/170 (50%)

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
           Q G K D+ TYT ++    +     +  ++  +MV++G + + V +  LI  + R   + 
Sbjct: 393 QRGLKPDKFTYTMLIDGCCKEGDLESALEIRKEMVKEGIELDNVAFTALISGFCREGQVI 452

Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
           EA    ++M   G +PD  TY  +I    K G +     + K+MQ  G  P   TY+V++
Sbjct: 453 EAERTLREMLEAGIKPDDATYTMVIHGFCKKGDVKTGFKLLKEMQCDGHVPGVVTYNVLL 512

Query: 473 NCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKL 522
           N L K G ++ A+ L   M+N G +P+ +TYNI++    K  N +   KL
Sbjct: 513 NGLCKQGQMKNANMLLDAMLNLGVVPDDITYNILLEGHCKHGNREDFDKL 562



 Score = 56.6 bits (135), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 38/156 (24%), Positives = 71/156 (45%), Gaps = 3/156 (1%)

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
           + G + D   +T ++    R  Q     + L +M+  G +P+  TY  +IH + +   + 
Sbjct: 428 KEGIELDNVAFTALISGFCREGQVIEAERTLREMLEAGIKPDDATYTMVIHGFCKKGDVK 487

Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
               + K+MQ  G  P  VTY  L++   K G +  A  +   M   G+ PD  TY++++
Sbjct: 488 TGFKLLKEMQCDGHVPGVVTYNVLLNGLCKQGQMKNANMLLDAMLNLGVVPDDITYNILL 547

Query: 473 NCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIA 508
               K G+ +   +L  E   +G + +  +Y  +I 
Sbjct: 548 EGHCKHGNREDFDKLQSE---KGLVQDYGSYTSLIG 580


>gi|225424178|ref|XP_002280443.1| PREDICTED: pentatricopeptide repeat-containing protein At1g71060,
           mitochondrial [Vitis vinifera]
          Length = 531

 Score =  156 bits (394), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 96/349 (27%), Positives = 174/349 (49%), Gaps = 5/349 (1%)

Query: 332 QVLKQLQDH-TVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDG 390
           +VLK+L +   +AL FF W  +Q GFK+    Y  ++  LG+ +QF  I  L++ M   G
Sbjct: 116 EVLKKLSNSGVIALSFFRWAEKQKGFKYSTENYNALIEALGKIKQFKMIWNLVNDMRSKG 175

Query: 391 CQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAM 450
                 T+  +   Y RA  + EA++ F++M+  G +P    +  L+D   K+  ++ A 
Sbjct: 176 LLTQE-TFALISRRYARARKVKEAVETFEKMEKFGLQPVLSDFNRLLDALCKSRHVERAQ 234

Query: 451 DMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQ 510
           +++ KM+     PD  +Y++++   G+  +L    +++ EM ++G  P+ VTY I+I   
Sbjct: 235 EVFDKMKDRKFRPDIKSYTILLEGWGQEQNLLRLDEVYREMKDEGFEPDAVTYGILINAH 294

Query: 511 AKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDE 570
            KAR Y +A++L+  M+     P    Y  ++  LG    L EA   F   +   + P+ 
Sbjct: 295 CKARRYDAAVELFHKMEANKCMPTPHIYCTLINGLGSERRLTEALQFFERSKASGFTPEA 354

Query: 571 PVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQG 630
           P Y  +V  + ++  +  A+   + M + G+ P   T + +L   ++  +  +AY + QG
Sbjct: 355 PTYNAVVGSYCQSMRMDDAYRIVDEMRKCGVGPQTRTYDIILHHLIKARRTKEAYRVFQG 414

Query: 631 MLNL-GLKPSLQTYTLLLSC-CTEARSPYDMGFCHELMAVSGHPA-HMF 676
           M +  G +PS+ TY +++   C E R    +    E+ A    P  HMF
Sbjct: 415 MSSEPGCEPSVSTYEIVVRMFCNEERVDMALRVWDEMKAKGVLPGMHMF 463



 Score =  123 bits (309), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 83/338 (24%), Positives = 171/338 (50%), Gaps = 10/338 (2%)

Query: 284 LAPFSRHFASTGNVVESVSRILRQWKWGPLAEEALGNTNYSMDAYQANQVLKQLQDHTVA 343
            A  SR +A    V E+V    +  K+G   +  L + N  +DA   ++ +++ Q+    
Sbjct: 182 FALISRRYARARKVKEAVETFEKMEKFG--LQPVLSDFNRLLDALCKSRHVERAQE---- 235

Query: 344 LGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIH 403
              F+ ++ +  F+ D  +YT ++   G+ +    ++++  +M  +G +P+ VTY  LI+
Sbjct: 236 --VFDKMKDRK-FRPDIKSYTILLEGWGQEQNLLRLDEVYREMKDEGFEPDAVTYGILIN 292

Query: 404 SYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSP 463
           ++ +A   + A+++F +M+   C P    YCTLI+       L  A+  +++ +A+G +P
Sbjct: 293 AHCKARRYDAAVELFHKMEANKCMPTPHIYCTLINGLGSERRLTEALQFFERSKASGFTP 352

Query: 464 DTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLY 523
           +  TY+ ++    ++  +  A+++  EM   G  P   TY+I++    KAR  + A +++
Sbjct: 353 EAPTYNAVVGSYCQSMRMDDAYRIVDEMRKCGVGPQTRTYDIILHHLIKARRTKEAYRVF 412

Query: 524 RDMQNA-GFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGK 582
           + M +  G EP   TY IV+ +  +   +D A  V+ EM+ K  +P   ++  L++    
Sbjct: 413 QGMSSEPGCEPSVSTYEIVVRMFCNEERVDMALRVWDEMKAKGVLPGMHMFSTLINSLCY 472

Query: 583 AGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQ 620
              + +A +++  ML  G+RP     ++L    L  G+
Sbjct: 473 ENKLDEACKYFHEMLDMGIRPPAAMFSNLKQTLLDEGK 510


>gi|356532361|ref|XP_003534742.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16390,
           chloroplastic-like [Glycine max]
          Length = 646

 Score =  156 bits (394), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 127/603 (21%), Positives = 252/603 (41%), Gaps = 62/603 (10%)

Query: 282 AGLAPFSRHFASTGNVVESVSRILRQWKWGPLAEEALGNTNYSMDAYQANQVLKQLQDHT 341
           + L   +R   S     + VS IL+      L  +A+   N  ++ Y A           
Sbjct: 56  SSLTKLARSLDSCNPTQQHVSEILKVLGDNVLEADAVFILNSMVNPYTA----------L 105

Query: 342 VALGFFNWLRRQAGFKHDEHT--YTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYN 399
           +A+ +F     +   KH  H   Y   + +    + F    KL D+M++ G  PN++T++
Sbjct: 106 LAVEYF-----KQKIKHARHVILYNVTLKLFREVKDFEGAEKLFDEMLQRGVNPNLITFS 160

Query: 400 RLIHSYGRANYLNEALDVFKQMQVVGCEPD------------------------------ 429
            +I      +  ++A+  F+ M   GCEPD                              
Sbjct: 161 TMIICASVCSLPHKAVKWFEMMPSFGCEPDDNVCSSMIYSYARTGNADMALRLYDRAKAE 220

Query: 430 -----RVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAA 484
                 V +  LI +H  +G  D  +++Y  ++  G  P+  TY+ ++  +G+A   + A
Sbjct: 221 KWHVDTVVFSGLIKMHGMSGNYDGCLNVYNDLKVLGAKPNLVTYNALLYAMGRAKRARDA 280

Query: 485 HQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEV 544
             ++ EM+N G  PN  TY  ++    +AR  + AL +Y++M+  G + D + Y+++ ++
Sbjct: 281 KAIYEEMINNGLTPNWPTYAALLQAYCRARFNRDALNVYKEMKEKGKDLDILLYNMLFDM 340

Query: 545 LGHCGYLDEAEAVFAEMRRKNWV-PDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRP 603
             + G   EA  +F +M+      PD   Y  L++++   G + +    +  M+++G  P
Sbjct: 341 CANVGCEGEAVKIFEDMKSSGTCRPDSFTYASLINMYSSIGKISEMEAMFNEMMESGFEP 400

Query: 604 NVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGFCH 663
           N+    SL+  + +  +  D   +   +++LG+ P  +    LL   T+     ++G   
Sbjct: 401 NIIVLTSLVHCYGKAKRTDDVVKIFNQLMDLGISPDGRFCDCLLYAMTQVPKE-ELGKLT 459

Query: 664 ELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRESKRGLVDAVVDFLHKS 723
             +  +       L  +      G + R       E+++S + + K+ + + ++D     
Sbjct: 460 GCVEKANPKLGSVLRYIMEKQEGGGDFRMEAS---ELLNSTEADIKKSMCNCLIDLCVNL 516

Query: 724 GLKEEAGSVWEVAAQKNVYPDAVKEKGMSYWLINLHVMSDGTAVIALSRTLAWFRKQMLI 783
            + + A  + ++     +Y D ++ +  + W ++L  +S G A+ ALS  +    K + +
Sbjct: 517 DVPDRARDLLDLGLTLEIYTD-IQSRSQAKWSLHLKRLSVGAALTALSVWINDLSKTLEL 575

Query: 784 SGVGPSRIDIVTGWGRRSRVTGTSLVRQAVQEL-LHMFSFPFFTENGNSGCFVGCGEPLN 842
               P  + I TG G+      +  V   V EL L     PF      +G F+   E   
Sbjct: 576 GEELPPLLGINTGGGKHRF---SDKVLPTVFELYLKELKAPFHKAANKAGWFLATSEAAT 632

Query: 843 KWL 845
            WL
Sbjct: 633 SWL 635


>gi|242070015|ref|XP_002450284.1| hypothetical protein SORBIDRAFT_05g003220 [Sorghum bicolor]
 gi|241936127|gb|EES09272.1| hypothetical protein SORBIDRAFT_05g003220 [Sorghum bicolor]
          Length = 727

 Score =  156 bits (394), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 99/319 (31%), Positives = 165/319 (51%), Gaps = 5/319 (1%)

Query: 357 KHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALD 416
           K    TY  ++  L        +  L  +M  +G  P +VTYN +IH   ++  +  A  
Sbjct: 311 KASSFTYNPLITALLERGFVQKVEALQMEMENEGIMPTLVTYNAIIHGLLKSEQVEAAQL 370

Query: 417 VFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLG 476
            F +M+ +G  PD +TY ++++ + KAG L  A+ +   ++ AGL+P   TY+ +I+   
Sbjct: 371 KFAEMRAMGLLPDLITYNSMLNGYCKAGNLKEALWLLGDLRRAGLAPTVLTYNTLIDGYC 430

Query: 477 KAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKV 536
           + G L+ A +L  EMV QGC P++ TY I++    K RN   A + + +M + G +PD  
Sbjct: 431 RLGGLEEARRLKEEMVEQGCFPDVCTYTILMNGSHKVRNLPMAREFFDEMLSKGLQPDCF 490

Query: 537 TYS--IVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYE 594
            Y+  I  E++   G   +A  +   M  K   PD   Y +++D   K GN++ A +   
Sbjct: 491 AYNTRICAELI--LGDTHKAFQLREVMMLKGIYPDTVTYNVIIDGLCKTGNLKDAKDLKM 548

Query: 595 AMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL-SCCTEA 653
            M+  GL+P+  T   L+ A    G LS+A  LL GM++ GL+PS+ TYT+L+ +CC   
Sbjct: 549 KMVSDGLQPDCITYTCLIHAHCERGLLSEARKLLNGMVSDGLQPSVVTYTILIHTCCRRG 608

Query: 654 RSPYDMGFCHELMAVSGHP 672
                 G+  +++ V   P
Sbjct: 609 NLYSAYGWFRKMLDVGIEP 627



 Score =  155 bits (391), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 107/317 (33%), Positives = 148/317 (46%), Gaps = 6/317 (1%)

Query: 333 VLKQLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQ 392
           +LK  Q     L F     R  G   D  TY +M+    +A        LL  + R G  
Sbjct: 359 LLKSEQVEAAQLKFAEM--RAMGLLPDLITYNSMLNGYCKAGNLKEALWLLGDLRRAGLA 416

Query: 393 PNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDM 452
           P V+TYN LI  Y R   L EA  + ++M   GC PD  TY  L++   K   L +A + 
Sbjct: 417 PTVLTYNTLIDGYCRLGGLEEARRLKEEMVEQGCFPDVCTYTILMNGSHKVRNLPMAREF 476

Query: 453 YKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAK 512
           + +M + GL PD F Y+  I      G    A QL   M+ +G  P+ VTYN++I    K
Sbjct: 477 FDEMLSKGLQPDCFAYNTRICAELILGDTHKAFQLREVMMLKGIYPDTVTYNVIIDGLCK 536

Query: 513 ARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHC--GYLDEAEAVFAEMRRKNWVPDE 570
             N + A  L   M + G +PD +TY+ ++    HC  G L EA  +   M      P  
Sbjct: 537 TGNLKDAKDLKMKMVSDGLQPDCITYTCLIH--AHCERGLLSEARKLLNGMVSDGLQPSV 594

Query: 571 PVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQG 630
             Y +L+    + GN+  A+ W+  ML  G+ PN  T N L+ A  R G+   AYH    
Sbjct: 595 VTYTILIHTCCRRGNLYSAYGWFRKMLDVGIEPNEITYNVLIHALCRTGRTLLAYHHFHE 654

Query: 631 MLNLGLKPSLQTYTLLL 647
           ML  GL P+  TYTLL+
Sbjct: 655 MLERGLAPNKYTYTLLI 671



 Score =  134 bits (336), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 102/353 (28%), Positives = 160/353 (45%), Gaps = 27/353 (7%)

Query: 291 FASTGNVVESVSRILRQWKWGPLAEEALGNT----NYSMDAY---QANQVLKQLQDHTVA 343
           +   GN+ E++      W  G L    L  T    N  +D Y      +  ++L++  V 
Sbjct: 394 YCKAGNLKEAL------WLLGDLRRAGLAPTVLTYNTLIDGYCRLGGLEEARRLKEEMVE 447

Query: 344 LGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIH 403
            G F           D  TYT ++    + R      +  D+M+  G QP+   YN  I 
Sbjct: 448 QGCFP----------DVCTYTILMNGSHKVRNLPMAREFFDEMLSKGLQPDCFAYNTRIC 497

Query: 404 SYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSP 463
           +       ++A  + + M + G  PD VTY  +ID   K G L  A D+  KM + GL P
Sbjct: 498 AELILGDTHKAFQLREVMMLKGIYPDTVTYNVIIDGLCKTGNLKDAKDLKMKMVSDGLQP 557

Query: 464 DTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLY 523
           D  TY+ +I+   + G L  A +L   MV+ G  P++VTY I+I    +  N  SA   +
Sbjct: 558 DCITYTCLIHAHCERGLLSEARKLLNGMVSDGLQPSVVTYTILIHTCCRRGNLYSAYGWF 617

Query: 524 RDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKA 583
           R M + G EP+++TY++++  L   G    A   F EM  +   P++  Y LL+D   + 
Sbjct: 618 RKMLDVGIEPNEITYNVLIHALCRTGRTLLAYHHFHEMLERGLAPNKYTYTLLIDGNCRE 677

Query: 584 GNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGL 636
           GN   A   Y  M Q G+ P+  T N+L   F +       YH ++ + N+ L
Sbjct: 678 GNWADAIRLYFEMHQNGIPPDYCTHNALFKGFDK----GHMYHAIEYLENIVL 726



 Score =  130 bits (326), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 91/296 (30%), Positives = 134/296 (45%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           R+AG      TY T++    R        +L ++MV  GC P+V TY  L++   +   L
Sbjct: 411 RRAGLAPTVLTYNTLIDGYCRLGGLEEARRLKEEMVEQGCFPDVCTYTILMNGSHKVRNL 470

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
             A + F +M   G +PD   Y T I      G    A  + + M   G+ PDT TY+VI
Sbjct: 471 PMAREFFDEMLSKGLQPDCFAYNTRICAELILGDTHKAFQLREVMMLKGIYPDTVTYNVI 530

Query: 472 INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF 531
           I+ L K G+L+ A  L  +MV+ G  P+ +TY  +I    +      A KL   M + G 
Sbjct: 531 IDGLCKTGNLKDAKDLKMKMVSDGLQPDCITYTCLIHAHCERGLLSEARKLLNGMVSDGL 590

Query: 532 EPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWE 591
           +P  VTY+I++      G L  A   F +M      P+E  Y +L+    + G    A+ 
Sbjct: 591 QPSVVTYTILIHTCCRRGNLYSAYGWFRKMLDVGIEPNEITYNVLIHALCRTGRTLLAYH 650

Query: 592 WYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
            +  ML+ GL PN  T   L+    R G  +DA  L   M   G+ P   T+  L 
Sbjct: 651 HFHEMLERGLAPNKYTYTLLIDGNCREGNWADAIRLYFEMHQNGIPPDYCTHNALF 706



 Score =  126 bits (316), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 87/288 (30%), Positives = 144/288 (50%), Gaps = 3/288 (1%)

Query: 362 TYTTMVGILGRARQFGAINKLLDQMVRDG--CQPNVVTYNRLIHSYGRANYLNEALDVFK 419
           TY T++    +  +    + LL +M   G  C  N VTYN +I    R  +L  A  +  
Sbjct: 245 TYNTLLDSFLKEGRKDEASMLLKEMETQGGGCLLNDVTYNVVISFLAREGHLENAAKLVD 304

Query: 420 QMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAG 479
            M++   +    TY  LI    + GF+     +  +M+  G+ P   TY+ II+ L K+ 
Sbjct: 305 SMRLSK-KASSFTYNPLITALLERGFVQKVEALQMEMENEGIMPTLVTYNAIIHGLLKSE 363

Query: 480 HLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYS 539
            ++AA   F EM   G +P+L+TYN M+    KA N + AL L  D++ AG  P  +TY+
Sbjct: 364 QVEAAQLKFAEMRAMGLLPDLITYNSMLNGYCKAGNLKEALWLLGDLRRAGLAPTVLTYN 423

Query: 540 IVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQA 599
            +++     G L+EA  +  EM  +   PD   Y +L++   K  N+  A E+++ ML  
Sbjct: 424 TLIDGYCRLGGLEEARRLKEEMVEQGCFPDVCTYTILMNGSHKVRNLPMAREFFDEMLSK 483

Query: 600 GLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
           GL+P+    N+ + A L +G    A+ L + M+  G+ P   TY +++
Sbjct: 484 GLQPDCFAYNTRICAELILGDTHKAFQLREVMMLKGIYPDTVTYNVII 531



 Score =  116 bits (290), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 87/286 (30%), Positives = 143/286 (50%), Gaps = 4/286 (1%)

Query: 390 GCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVA 449
           G  P+V   N ++     A   ++   V+++M  +  EP  VTY TL+D   K G  D A
Sbjct: 203 GVAPDVRDCNCVLRVLRDAARWDDVRAVYREMLQLEIEPTIVTYNTLLDSFLKEGRKDEA 262

Query: 450 MDMYKKM--QAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMI 507
             + K+M  Q  G   +  TY+V+I+ L + GHL+ A +L   M       +  TYN +I
Sbjct: 263 SMLLKEMETQGGGCLLNDVTYNVVISFLAREGHLENAAKLVDSMRLSKKASSF-TYNPLI 321

Query: 508 ALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWV 567
               +    Q    L  +M+N G  P  VTY+ ++  L     ++ A+  FAEMR    +
Sbjct: 322 TALLERGFVQKVEALQMEMENEGIMPTLVTYNAIIHGLLKSEQVEAAQLKFAEMRAMGLL 381

Query: 568 PDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHL 627
           PD   Y  +++ + KAGN+++A      + +AGL P V T N+L+  + R+G L +A  L
Sbjct: 382 PDLITYNSMLNGYCKAGNLKEALWLLGDLRRAGLAPTVLTYNTLIDGYCRLGGLEEARRL 441

Query: 628 LQGMLNLGLKPSLQTYTLLLSCCTEARS-PYDMGFCHELMAVSGHP 672
            + M+  G  P + TYT+L++   + R+ P    F  E+++    P
Sbjct: 442 KEEMVEQGCFPDVCTYTILMNGSHKVRNLPMAREFFDEMLSKGLQP 487



 Score = 63.2 bits (152), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 54/231 (23%), Positives = 94/231 (40%), Gaps = 36/231 (15%)

Query: 453 YKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAK 512
           ++ +   G++PD    + ++  L  A        ++ EM+     P +VTYN ++    K
Sbjct: 196 FRVVACHGVAPDVRDCNCVLRVLRDAARWDDVRAVYREMLQLEIEPTIVTYNTLLDSFLK 255

Query: 513 ARNYQSALKLYRDM--QNAGFEPDKVTYSIVMEVLGHCGYLDEA---------------- 554
                 A  L ++M  Q  G   + VTY++V+  L   G+L+ A                
Sbjct: 256 EGRKDEASMLLKEMETQGGGCLLNDVTYNVVISFLAREGHLENAAKLVDSMRLSKKASSF 315

Query: 555 ------------------EAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAM 596
                             EA+  EM  +  +P    Y  ++    K+  V  A   +  M
Sbjct: 316 TYNPLITALLERGFVQKVEALQMEMENEGIMPTLVTYNAIIHGLLKSEQVEAAQLKFAEM 375

Query: 597 LQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
              GL P++ T NS+L+ + + G L +A  LL  +   GL P++ TY  L+
Sbjct: 376 RAMGLLPDLITYNSMLNGYCKAGNLKEALWLLGDLRRAGLAPTVLTYNTLI 426


>gi|42572723|ref|NP_974457.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|332646343|gb|AEE79864.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 590

 Score =  156 bits (394), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 91/349 (26%), Positives = 174/349 (49%), Gaps = 6/349 (1%)

Query: 334 LKQLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQP 393
            KQL+   +      WLR Q  +   E  +  ++   G+   F    ++L  + + G  P
Sbjct: 120 FKQLKKWNLVSEILEWLRYQNWWNFSEIDFLMLITAYGKLGNFNGAERVLSVLSKMGSTP 179

Query: 394 NVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMY 453
           NV++Y  L+ SYGR    N A  +F++MQ  G EP  +TY  ++    +      A +++
Sbjct: 180 NVISYTALMESYGRGGKCNNAEAIFRRMQSSGPEPSAITYQIILKTFVEGDKFKEAEEVF 239

Query: 454 KKM---QAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQ 510
           + +   + + L PD   Y ++I    KAG+ + A ++F  MV +G   + VTYN +++ +
Sbjct: 240 ETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTVTYNSLMSFE 299

Query: 511 AKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDE 570
               +Y+   K+Y  MQ +  +PD V+Y+++++  G     +EA +VF EM      P  
Sbjct: 300 T---SYKEVSKIYDQMQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTH 356

Query: 571 PVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQG 630
             Y +L+D +  +G V +A   +++M +  + P++ +  ++LSA++    +  A    + 
Sbjct: 357 KAYNILLDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKR 416

Query: 631 MLNLGLKPSLQTYTLLLSCCTEARSPYDMGFCHELMAVSGHPAHMFLLS 679
           +   G +P++ TY  L+    +A     M   +E M +SG  A+  +L+
Sbjct: 417 IKVDGFEPNIVTYGTLIKGYAKANDVEKMMEVYEKMRLSGIKANQTILT 465



 Score =  119 bits (297), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 68/256 (26%), Positives = 127/256 (49%), Gaps = 13/256 (5%)

Query: 349 WLRRQAG-FKHDEHTYTTMVG------------ILGRARQFGAINKLLDQMVRDGCQPNV 395
           ++ ++AG ++     +++MVG            ++     +  ++K+ DQM R   QP+V
Sbjct: 262 YMYKKAGNYEKARKVFSSMVGKGVPQSTVTYNSLMSFETSYKEVSKIYDQMQRSDIQPDV 321

Query: 396 VTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKK 455
           V+Y  LI +YGRA    EAL VF++M   G  P    Y  L+D  A +G ++ A  ++K 
Sbjct: 322 VSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKS 381

Query: 456 MQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARN 515
           M+   + PD ++Y+ +++    A  ++ A + F  +   G  PN+VTY  +I   AKA +
Sbjct: 382 MRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYAKAND 441

Query: 516 YQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGL 575
            +  +++Y  M+ +G + ++   + +M+  G C     A   + EM      PD+    +
Sbjct: 442 VEKMMEVYEKMRLSGIKANQTILTTIMDASGRCKNFGSALGWYKEMESCGVPPDQKAKNV 501

Query: 576 LVDLWGKAGNVRKAWE 591
           L+ L      + +A E
Sbjct: 502 LLSLASTQDELEEAKE 517



 Score =  112 bits (281), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 69/276 (25%), Positives = 133/276 (48%), Gaps = 3/276 (1%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           +++  K D+  Y  M+ +  +A  +    K+   MV  G   + VTYN L+      +Y 
Sbjct: 246 KKSPLKPDQKMYHMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTVTYNSLMSF--ETSY- 302

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
            E   ++ QMQ    +PD V+Y  LI  + +A   + A+ ++++M  AG+ P    Y+++
Sbjct: 303 KEVSKIYDQMQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNIL 362

Query: 472 INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF 531
           ++    +G ++ A  +F  M      P+L +Y  M++    A + + A K ++ ++  GF
Sbjct: 363 LDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGF 422

Query: 532 EPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWE 591
           EP+ VTY  +++       +++   V+ +MR      ++ +   ++D  G+  N   A  
Sbjct: 423 EPNIVTYGTLIKGYAKANDVEKMMEVYEKMRLSGIKANQTILTTIMDASGRCKNFGSALG 482

Query: 592 WYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHL 627
           WY+ M   G+ P+    N LLS      +L +A  L
Sbjct: 483 WYKEMESCGVPPDQKAKNVLLSLASTQDELEEAKEL 518



 Score = 88.6 bits (218), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 63/280 (22%), Positives = 127/280 (45%), Gaps = 41/280 (14%)

Query: 468 YSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQ 527
           + ++I   GK G+   A ++   +   G  PN+++Y  ++    +     +A  ++R MQ
Sbjct: 149 FLMLITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRRMQ 208

Query: 528 NAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEM---RRKNWVPDEPVYGLLVDLWGKAG 584
           ++G EP  +TY I+++         EAE VF  +   ++    PD+ +Y +++ ++ KAG
Sbjct: 209 SSGPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAG 268

Query: 585 NVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYT 644
           N  KA + + +M+  G+  +  T NSL+S      ++S  Y  +Q      ++P + +Y 
Sbjct: 269 NYEKARKVFSSMVGKGVPQSTVTYNSLMSFETSYKEVSKIYDQMQ---RSDIQPDVVSYA 325

Query: 645 LLLSCCTEARSPYDMGFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSE 704
           LL+     AR         E ++V                            F EM+ + 
Sbjct: 326 LLIKAYGRARRE------EEALSV----------------------------FEEMLDAG 351

Query: 705 DRESKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPD 744
            R + +   + ++D    SG+ E+A +V++   +  ++PD
Sbjct: 352 VRPTHKAY-NILLDAFAISGMVEQAKTVFKSMRRDRIFPD 390


>gi|358346916|ref|XP_003637510.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355503445|gb|AES84648.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 718

 Score =  156 bits (394), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 92/303 (30%), Positives = 157/303 (51%), Gaps = 1/303 (0%)

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
           + GF  D+ T+ ++V    R         ++D M+  G  P+V TYN LI    +     
Sbjct: 256 EEGFSPDQVTFNSLVNGFCRIGNVNDALDIVDFMIEKGFDPDVYTYNSLISGMCKLGEFE 315

Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
           +A+++ +QM +  C P+ VTY TLI    K   ++ A D+ + + + GL PD  T++ +I
Sbjct: 316 KAIEILQQMILRECSPNTVTYNTLISALCKENEIEAATDLARILVSKGLLPDVCTFNTLI 375

Query: 473 NCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFE 532
             L  + +   A ++F EM N+GC P+  TY+I+I      R  + AL L ++M+++G  
Sbjct: 376 QGLCLSKNQDIAMEMFEEMKNKGCKPDEFTYSILIDSLCYERRLKEALMLLKEMESSGCA 435

Query: 533 PDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEW 592
            + V Y+ +++ L     +++AE +F +M           Y  L+D   K   V +A + 
Sbjct: 436 RNAVVYNTLIDGLCKSRRIEDAEEIFDQMELLGVSRSSVTYNTLIDGLCKNKRVEEASQL 495

Query: 593 YEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTY-TLLLSCCT 651
            + M+  GL+P+  T NSLL+ F RVG +  A  ++Q M + G +P + TY TL+   C 
Sbjct: 496 MDQMIMEGLKPDKFTYNSLLTYFCRVGDIEKAGDIVQTMASNGCEPDIFTYGTLIGGLCR 555

Query: 652 EAR 654
             R
Sbjct: 556 AGR 558



 Score =  149 bits (377), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 91/321 (28%), Positives = 160/321 (49%), Gaps = 1/321 (0%)

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
           + GF  D +TY +++  + +  +F    ++L QM+   C PN VTYN LI +  + N + 
Sbjct: 291 EKGFDPDVYTYNSLISGMCKLGEFEKAIEILQQMILRECSPNTVTYNTLISALCKENEIE 350

Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
            A D+ + +   G  PD  T+ TLI     +   D+AM+M+++M+  G  PD FTYS++I
Sbjct: 351 AATDLARILVSKGLLPDVCTFNTLIQGLCLSKNQDIAMEMFEEMKNKGCKPDEFTYSILI 410

Query: 473 NCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFE 532
           + L     L+ A  L  EM + GC  N V YN +I    K+R  + A +++  M+  G  
Sbjct: 411 DSLCYERRLKEALMLLKEMESSGCARNAVVYNTLIDGLCKSRRIEDAEEIFDQMELLGVS 470

Query: 533 PDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEW 592
              VTY+ +++ L     ++EA  +  +M  +   PD+  Y  L+  + + G++ KA + 
Sbjct: 471 RSSVTYNTLIDGLCKNKRVEEASQLMDQMIMEGLKPDKFTYNSLLTYFCRVGDIEKAGDI 530

Query: 593 YEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYT-LLLSCCT 651
            + M   G  P++ T  +L+    R G++  A  LL+ +   G+  +   Y  ++ +   
Sbjct: 531 VQTMASNGCEPDIFTYGTLIGGLCRAGRVDVASKLLRSVQMKGIVLTPHAYNPVIQALFM 590

Query: 652 EARSPYDMGFCHELMAVSGHP 672
             R+   M    E+M  S  P
Sbjct: 591 RKRTKEGMRLFREMMEKSDPP 611



 Score =  140 bits (352), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 94/330 (28%), Positives = 163/330 (49%), Gaps = 37/330 (11%)

Query: 355 GFKHDEHTYTTMV-GILGRARQFGAINKLLDQMVRDGC---------------------- 391
           G K DE T+TT++ G +      GA+ K+  QM+  GC                      
Sbjct: 188 GLKPDEITFTTLMQGFIEEGDLNGAL-KMKKQMLGYGCLLTNVSVKVLVNGFCKEGRVEE 246

Query: 392 -------------QPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLID 438
                         P+ VT+N L++ + R   +N+ALD+   M   G +PD  TY +LI 
Sbjct: 247 ALRFVLEVSEEGFSPDQVTFNSLVNGFCRIGNVNDALDIVDFMIEKGFDPDVYTYNSLIS 306

Query: 439 IHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIP 498
              K G  + A+++ ++M     SP+T TY+ +I+ L K   ++AA  L   +V++G +P
Sbjct: 307 GMCKLGEFEKAIEILQQMILRECSPNTVTYNTLISALCKENEIEAATDLARILVSKGLLP 366

Query: 499 NLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVF 558
           ++ T+N +I     ++N   A++++ +M+N G +PD+ TYSI+++ L +   L EA  + 
Sbjct: 367 DVCTFNTLIQGLCLSKNQDIAMEMFEEMKNKGCKPDEFTYSILIDSLCYERRLKEALMLL 426

Query: 559 AEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRV 618
            EM       +  VY  L+D   K+  +  A E ++ M   G+  +  T N+L+    + 
Sbjct: 427 KEMESSGCARNAVVYNTLIDGLCKSRRIEDAEEIFDQMELLGVSRSSVTYNTLIDGLCKN 486

Query: 619 GQLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
            ++ +A  L+  M+  GLKP   TY  LL+
Sbjct: 487 KRVEEASQLMDQMIMEGLKPDKFTYNSLLT 516



 Score =  127 bits (318), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 82/310 (26%), Positives = 144/310 (46%), Gaps = 1/310 (0%)

Query: 346 FFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSY 405
               L  + GFK D + Y   +  L    +   +  L  +MV +G   +V T+N LI + 
Sbjct: 109 LLKILENELGFKPDTNFYNIALNALVEDNKLKLVEMLHSKMVNEGIVLDVSTFNVLIKAL 168

Query: 406 GRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDT 465
            +A+ L  A+ + ++M   G +PD +T+ TL+    + G L+ A+ M K+M   G     
Sbjct: 169 CKAHQLRPAILMLEEMANHGLKPDEITFTTLMQGFIEEGDLNGALKMKKQMLGYGCLLTN 228

Query: 466 FTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRD 525
            +  V++N   K G ++ A +   E+  +G  P+ VT+N ++    +  N   AL +   
Sbjct: 229 VSVKVLVNGFCKEGRVEEALRFVLEVSEEGFSPDQVTFNSLVNGFCRIGNVNDALDIVDF 288

Query: 526 MQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGN 585
           M   GF+PD  TY+ ++  +   G  ++A  +  +M  +   P+   Y  L+    K   
Sbjct: 289 MIEKGFDPDVYTYNSLISGMCKLGEFEKAIEILQQMILRECSPNTVTYNTLISALCKENE 348

Query: 586 VRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTL 645
           +  A +    ++  GL P+V T N+L+           A  + + M N G KP   TY++
Sbjct: 349 IEAATDLARILVSKGLLPDVCTFNTLIQGLCLSKNQDIAMEMFEEMKNKGCKPDEFTYSI 408

Query: 646 LL-SCCTEAR 654
           L+ S C E R
Sbjct: 409 LIDSLCYERR 418



 Score =  123 bits (309), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 77/271 (28%), Positives = 131/271 (48%), Gaps = 2/271 (0%)

Query: 338 QDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVT 397
           ++  +A+  F  ++ + G K DE TY+ ++  L   R+      LL +M   GC  N V 
Sbjct: 382 KNQDIAMEMFEEMKNK-GCKPDEFTYSILIDSLCYERRLKEALMLLKEMESSGCARNAVV 440

Query: 398 YNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQ 457
           YN LI    ++  + +A ++F QM+++G     VTY TLID   K   ++ A  +  +M 
Sbjct: 441 YNTLIDGLCKSRRIEDAEEIFDQMELLGVSRSSVTYNTLIDGLCKNKRVEEASQLMDQMI 500

Query: 458 AAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQ 517
             GL PD FTY+ ++    + G ++ A  +   M + GC P++ TY  +I    +A    
Sbjct: 501 MEGLKPDKFTYNSLLTYFCRVGDIEKAGDIVQTMASNGCEPDIFTYGTLIGGLCRAGRVD 560

Query: 518 SALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLV 577
            A KL R +Q  G       Y+ V++ L       E   +F EM  K+  PD   + ++ 
Sbjct: 561 VASKLLRSVQMKGIVLTPHAYNPVIQALFMRKRTKEGMRLFREMMEKSDPPDALTHKIVF 620

Query: 578 -DLWGKAGNVRKAWEWYEAMLQAGLRPNVPT 607
             L    G +++A ++   ML+ G+ P  P+
Sbjct: 621 RGLCNGGGPIQEAIDFTVEMLEKGILPEFPS 651



 Score =  109 bits (273), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 85/390 (21%), Positives = 170/390 (43%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           G   D  T+  ++  L +A Q      +L++M   G +P+ +T+  L+  +     LN A
Sbjct: 153 GIVLDVSTFNVLIKALCKAHQLRPAILMLEEMANHGLKPDEITFTTLMQGFIEEGDLNGA 212

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
           L + KQM   GC    V+   L++   K G ++ A+    ++   G SPD  T++ ++N 
Sbjct: 213 LKMKKQMLGYGCLLTNVSVKVLVNGFCKEGRVEEALRFVLEVSEEGFSPDQVTFNSLVNG 272

Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPD 534
             + G++  A  +   M+ +G  P++ TYN +I+   K   ++ A+++ + M      P+
Sbjct: 273 FCRIGNVNDALDIVDFMIEKGFDPDVYTYNSLISGMCKLGEFEKAIEILQQMILRECSPN 332

Query: 535 KVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYE 594
            VTY+ ++  L     ++ A  +   +  K  +PD   +  L+     + N   A E +E
Sbjct: 333 TVTYNTLISALCKENEIEAATDLARILVSKGLLPDVCTFNTLIQGLCLSKNQDIAMEMFE 392

Query: 595 AMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEAR 654
            M   G +P+  T + L+ +     +L +A  LL+ M + G   +   Y  L+    ++R
Sbjct: 393 EMKNKGCKPDEFTYSILIDSLCYERRLKEALMLLKEMESSGCARNAVVYNTLIDGLCKSR 452

Query: 655 SPYDMGFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRESKRGLVD 714
              D     + M + G        +    G       +     ++ M  E  +  +   +
Sbjct: 453 RIEDAEEIFDQMELLGVSRSSVTYNTLIDGLCKNKRVEEASQLMDQMIMEGLKPDKFTYN 512

Query: 715 AVVDFLHKSGLKEEAGSVWEVAAQKNVYPD 744
           +++ +  + G  E+AG + +  A     PD
Sbjct: 513 SLLTYFCRVGDIEKAGDIVQTMASNGCEPD 542



 Score =  106 bits (264), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 72/293 (24%), Positives = 135/293 (46%), Gaps = 1/293 (0%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           G   D  T+ T++  L  ++      ++ ++M   GC+P+  TY+ LI S      L EA
Sbjct: 363 GLLPDVCTFNTLIQGLCLSKNQDIAMEMFEEMKNKGCKPDEFTYSILIDSLCYERRLKEA 422

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
           L + K+M+  GC  + V Y TLID   K+  ++ A +++ +M+  G+S  + TY+ +I+ 
Sbjct: 423 LMLLKEMESSGCARNAVVYNTLIDGLCKSRRIEDAEEIFDQMELLGVSRSSVTYNTLIDG 482

Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPD 534
           L K   ++ A QL  +M+ +G  P+  TYN ++    +  + + A  + + M + G EPD
Sbjct: 483 LCKNKRVEEASQLMDQMIMEGLKPDKFTYNSLLTYFCRVGDIEKAGDIVQTMASNGCEPD 542

Query: 535 KVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYE 594
             TY  ++  L   G +D A  +   ++ K  V     Y  ++         ++    + 
Sbjct: 543 IFTYGTLIGGLCRAGRVDVASKLLRSVQMKGIVLTPHAYNPVIQALFMRKRTKEGMRLFR 602

Query: 595 AMLQAGLRPNVPTCNSLLSAFLR-VGQLSDAYHLLQGMLNLGLKPSLQTYTLL 646
            M++    P+  T   +        G + +A      ML  G+ P   ++  L
Sbjct: 603 EMMEKSDPPDALTHKIVFRGLCNGGGPIQEAIDFTVEMLEKGILPEFPSFGFL 655


>gi|225430029|ref|XP_002281569.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g25630-like [Vitis vinifera]
          Length = 635

 Score =  156 bits (394), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 101/374 (27%), Positives = 177/374 (47%), Gaps = 8/374 (2%)

Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRD-GCQPNVVTYNRL 401
           A+ +F W  +++G K    T+ T++   G A +     KLL+ M +D   +PN+ TYN L
Sbjct: 161 AMKYF-WKMKESGSKPTTSTFNTLIKGYGIAGEPEESQKLLELMSQDENVRPNLRTYNVL 219

Query: 402 IHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGL 461
           + ++     + +A +V  +M   G +PD VTY T+   +A+ G    A  +  +MQ + +
Sbjct: 220 VRAWCNKKNIMKAWNVVYKMVASGLQPDAVTYNTIATAYAQNGEASQAEGIILEMQNSNV 279

Query: 462 SPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALK 521
            P+  T  +II    K G ++ A Q    M + G  PNLV +N +I     A +     +
Sbjct: 280 QPNERTCCIIIGGYCKEGKIKEALQFVYRMKDLGLQPNLVVFNSLIKGFIDAVDRDGVNE 339

Query: 522 LYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWG 581
           +   M+  G +PD +T+S +M      G++D+   +F +M +    PD  VY +L   + 
Sbjct: 340 VLTLMEEFGVKPDVITFSTIMNAWSAAGFMDKCREIFDDMVKARIQPDAHVYSILAKGYV 399

Query: 582 KAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQ 641
           +AG   KA E   AM+++G  PNV    ++++ +   G++  A  + + M   G+ P+L+
Sbjct: 400 RAGEPEKAEEILNAMIKSGFHPNVVIFTTIINGWCSAGRMEYAIKIFEKMCECGIAPNLK 459

Query: 642 TYTLLLSCCTEARSPYDMGFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFL--- 698
           T+  L+    EAR P+      ++M           L + +       ++      L   
Sbjct: 460 TFETLIWGYGEARQPWKSEEVLQIMEEFNVQPEKTTLLLVAEAWRATGLKKEANRILSAV 519

Query: 699 ---EMMHSEDRESK 709
              EM H  DRE K
Sbjct: 520 KNEEMTHETDREDK 533



 Score =  133 bits (335), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 74/292 (25%), Positives = 147/292 (50%), Gaps = 3/292 (1%)

Query: 364 TTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQV 423
           T ++ I+    +   +  +LD ++  G +P++VTY  L+ +     + +    +  Q++ 
Sbjct: 76  TKLMNIMIEKGRPQEVQSILDSIIEGGHKPSLVTYTTLLAALTIQKHFDSIHSIISQVEE 135

Query: 424 VGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQA 483
            G EPD + +  +I+  +++G +  AM  + KM+ +G  P T T++ +I   G AG  + 
Sbjct: 136 NGMEPDSIFFNAVINAFSESGNMQEAMKYFWKMKESGSKPTTSTFNTLIKGYGIAGEPEE 195

Query: 484 AHQLFCEMVNQ--GCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIV 541
           + +L  E+++Q     PNL TYN+++      +N   A  +   M  +G +PD VTY+ +
Sbjct: 196 SQKLL-ELMSQDENVRPNLRTYNVLVRAWCNKKNIMKAWNVVYKMVASGLQPDAVTYNTI 254

Query: 542 MEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGL 601
                  G   +AE +  EM+  N  P+E    +++  + K G +++A ++   M   GL
Sbjct: 255 ATAYAQNGEASQAEGIILEMQNSNVQPNERTCCIIIGGYCKEGKIKEALQFVYRMKDLGL 314

Query: 602 RPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEA 653
           +PN+   NSL+  F+          +L  M   G+KP + T++ +++  + A
Sbjct: 315 QPNLVVFNSLIKGFIDAVDRDGVNEVLTLMEEFGVKPDVITFSTIMNAWSAA 366


>gi|297844992|ref|XP_002890377.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297336219|gb|EFH66636.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 537

 Score =  156 bits (394), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 93/343 (27%), Positives = 159/343 (46%), Gaps = 39/343 (11%)

Query: 343 ALGFFNWLRRQAGF-KHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRL 401
           +L FFNW   +  + +   H Y  M+ + G+ RQF     L+D M     + ++ T+  L
Sbjct: 133 SLAFFNWATSRDDYDQKSPHPYNEMIDLAGKVRQFDLAWHLIDLMKSRNVEISIETFTIL 192

Query: 402 IHSYGRANYLNEALDVFKQMQVVGC----------------------------------E 427
           I  Y RA   +EA+  F +M+  GC                                  E
Sbjct: 193 IRRYVRAGLASEAVHCFNRMEDYGCVPDQIAFSIVISNLSRKRRASEAQSFFDSLKDRFE 252

Query: 428 PDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQL 487
           PD + Y  L+    +AG +  A  ++K M+ AG+ P+ +TYS++I+ L + G +  AH +
Sbjct: 253 PDVIVYTNLVRGWCRAGEISEAEKVFKDMKLAGIEPNVYTYSIVIDALCRCGQISRAHDV 312

Query: 488 FCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGH 547
           F +M++ GC PN +T+N ++ +  KA   +  L++Y  M+  G EPD +TY+ ++E   H
Sbjct: 313 FADMLDSGCAPNAITFNNLMRVHVKAGRPEKVLQVYNQMKKLGCEPDTITYNFLIET--H 370

Query: 548 C--GYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNV 605
           C    L+ A  V   M +K    +   +  +     K  +V  A   Y  M++A   PN 
Sbjct: 371 CRDENLENAVKVLNTMIKKKCEVNASTFNTIFRYIEKKRDVNGAHRMYSKMMEAKCEPNT 430

Query: 606 PTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
            T N L+  F           + + M +  ++P++ TY LL++
Sbjct: 431 VTYNILMRMFAGSKSTDMVLKMKKDMDDKEVEPNVNTYRLLVT 473



 Score =  143 bits (360), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 97/350 (27%), Positives = 171/350 (48%), Gaps = 14/350 (4%)

Query: 298 VESVSRILRQWKWGPLAEEALGNTNYSMDAYQA--NQV--------LKQLQDHTVALGFF 347
           +E+ + ++R++    LA EA+   N  M+ Y    +Q+        L + +  + A  FF
Sbjct: 186 IETFTILIRRYVRAGLASEAVHCFN-RMEDYGCVPDQIAFSIVISNLSRKRRASEAQSFF 244

Query: 348 NWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGR 407
           + L+ +  F+ D   YT +V    RA +     K+   M   G +PNV TY+ +I +  R
Sbjct: 245 DSLKDR--FEPDVIVYTNLVRGWCRAGEISEAEKVFKDMKLAGIEPNVYTYSIVIDALCR 302

Query: 408 ANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFT 467
              ++ A DVF  M   GC P+ +T+  L+ +H KAG  +  + +Y +M+  G  PDT T
Sbjct: 303 CGQISRAHDVFADMLDSGCAPNAITFNNLMRVHVKAGRPEKVLQVYNQMKKLGCEPDTIT 362

Query: 468 YSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQ 527
           Y+ +I    +  +L+ A ++   M+ + C  N  T+N +     K R+   A ++Y  M 
Sbjct: 363 YNFLIETHCRDENLENAVKVLNTMIKKKCEVNASTFNTIFRYIEKKRDVNGAHRMYSKMM 422

Query: 528 NAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVR 587
            A  EP+ VTY+I+M +       D    +  +M  K   P+   Y LLV ++   G+  
Sbjct: 423 EAKCEPNTVTYNILMRMFAGSKSTDMVLKMKKDMDDKEVEPNVNTYRLLVTMFCGMGHWN 482

Query: 588 KAWEWYEAMLQAG-LRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGL 636
            A++ ++ M++   L P++     +L+   R GQL     L++ M+  GL
Sbjct: 483 NAYKLFKEMVEEKCLTPSLSLYEMVLAQLRRAGQLKKHEELVEKMIQKGL 532



 Score =  140 bits (352), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 75/255 (29%), Positives = 135/255 (52%), Gaps = 3/255 (1%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           + AG + + +TY+ ++  L R  Q    + +   M+  GC PN +T+N L+  + +A   
Sbjct: 282 KLAGIEPNVYTYSIVIDALCRCGQISRAHDVFADMLDSGCAPNAITFNNLMRVHVKAGRP 341

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
            + L V+ QM+ +GCEPD +TY  LI+ H +   L+ A+ +   M       +  T++ I
Sbjct: 342 EKVLQVYNQMKKLGCEPDTITYNFLIETHCRDENLENAVKVLNTMIKKKCEVNASTFNTI 401

Query: 472 INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF 531
              + K   +  AH+++ +M+   C PN VTYNI++ + A +++    LK+ +DM +   
Sbjct: 402 FRYIEKKRDVNGAHRMYSKMMEAKCEPNTVTYNILMRMFAGSKSTDMVLKMKKDMDDKEV 461

Query: 532 EPDKVTYSIVMEVLGHCGYLDEAEAVFAEM-RRKNWVPDEPVYGLLVDLWGKAGNVRKAW 590
           EP+  TY +++ +    G+ + A  +F EM   K   P   +Y +++    +AG ++K  
Sbjct: 462 EPNVNTYRLLVTMFCGMGHWNNAYKLFKEMVEEKCLTPSLSLYEMVLAQLRRAGQLKKHE 521

Query: 591 EWYEAMLQAGL--RP 603
           E  E M+Q GL  RP
Sbjct: 522 ELVEKMIQKGLVTRP 536



 Score = 85.1 bits (209), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 54/189 (28%), Positives = 96/189 (50%), Gaps = 1/189 (0%)

Query: 468 YSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQ 527
           Y+ +I+  GK      A  L   M ++    ++ T+ I+I    +A     A+  +  M+
Sbjct: 154 YNEMIDLAGKVRQFDLAWHLIDLMKSRNVEISIETFTILIRRYVRAGLASEAVHCFNRME 213

Query: 528 NAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVR 587
           + G  PD++ +SIV+  L       EA++ F  ++ + + PD  VY  LV  W +AG + 
Sbjct: 214 DYGCVPDQIAFSIVISNLSRKRRASEAQSFFDSLKDR-FEPDVIVYTNLVRGWCRAGEIS 272

Query: 588 KAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
           +A + ++ M  AG+ PNV T + ++ A  R GQ+S A+ +   ML+ G  P+  T+  L+
Sbjct: 273 EAEKVFKDMKLAGIEPNVYTYSIVIDALCRCGQISRAHDVFADMLDSGCAPNAITFNNLM 332

Query: 648 SCCTEARSP 656
               +A  P
Sbjct: 333 RVHVKAGRP 341


>gi|452825793|gb|EME32788.1| mitochondrial protein translocase, MPT family [Galdieria
           sulphuraria]
          Length = 821

 Score =  156 bits (394), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 110/405 (27%), Positives = 195/405 (48%), Gaps = 13/405 (3%)

Query: 249 NSNFKSNLQPSDAKVVECVSERFSKPSREMKIPAGLAPFSRHFASTGNVVESVSRILRQW 308
           N N+  +      K  EC+    S PS E+K    +A +S +  + G + E  S   R  
Sbjct: 279 NWNYTMDALLKGGKARECLDMFLSMPSNEVK--RDVASWSIYITALGRL-ERYSEAERSL 335

Query: 309 KWGPLAEEALGNTNYSMDAYQANQVLKQLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVG 368
            W  + EE +    Y+  A    + L +      AL  F  + R      +  TY  ++ 
Sbjct: 336 IW--MREEHIQPNIYTYSALI--ETLGKGGLCVRALSQFRRMSRIDNIAPNTVTYNAVIK 391

Query: 369 ILGRARQ--FGAINK---LLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQV 423
           I+ R ++   G I +   LL +M   GC P+VVTY  LI ++ +      AL +F++M+ 
Sbjct: 392 IVSRCKRNDCGGITRAMSLLREMATKGCIPDVVTYATLIDAFSKRMEPERALKLFQEMKE 451

Query: 424 VGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQA 483
              +P+   Y +LI    +AG+++ A+ ++++M    + PD F ++ +I+  GK   +  
Sbjct: 452 ANVKPNNYCYSSLISAFCRAGYVERALAIFEEMTHERIVPDVFAFNALIDGFGKLRQVDK 511

Query: 484 AHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNA-GFEPDKVTYSIVM 542
           A +++  M      P+ +T+N +I+   KA+N   AL+   DM    G  PD+ +Y+ ++
Sbjct: 512 AFEIYDRMRKLQIQPDRITFNALISASGKAKNSIRALEAMGDMTEIYGLTPDRHSYNALI 571

Query: 543 EVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLR 602
           +  G  G   +A  VF EMR K   P    +  L+    ++ ++  +++  + MLQ GL 
Sbjct: 572 DACGKSGDFTKAYEVFEEMRTKGIRPCTVTFNALIYGASRSHDLAASFKIVDLMLQEGLN 631

Query: 603 PNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
           P+  T N+L+SA  R   LS A+ +L+    LG+ P   T+   +
Sbjct: 632 PDAYTMNTLISACNRRQDLSTAFEVLEKFKQLGVHPDNVTFNTFI 676



 Score =  136 bits (342), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 124/515 (24%), Positives = 226/515 (43%), Gaps = 62/515 (12%)

Query: 330 ANQVLKQLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGIL--GRARQFGAINKLLDQMV 387
           A Q+ +QL + T  L   ++  RQ       +   TM  +L  G+AR+   ++  L  M 
Sbjct: 254 AQQLTQQLTNRT-GLSCVSYDDRQT-----RNWNYTMDALLKGGKARE--CLDMFL-SMP 304

Query: 388 RDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLD 447
            +  + +V +++  I + GR    +EA      M+    +P+  TY  LI+   K G   
Sbjct: 305 SNEVKRDVASWSIYITALGRLERYSEAERSLIWMREEHIQPNIYTYSALIETLGKGGLCV 364

Query: 448 VAMDMYKKM-QAAGLSPDTFTYSVIINCLGKA-----GHLQAAHQLFCEMVNQGCIPNLV 501
            A+  +++M +   ++P+T TY+ +I  + +      G +  A  L  EM  +GCIP++V
Sbjct: 365 RALSQFRRMSRIDNIAPNTVTYNAVIKIVSRCKRNDCGGITRAMSLLREMATKGCIPDVV 424

Query: 502 TYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEM 561
           TY  +I   +K    + ALKL+++M+ A  +P+   YS ++      GY++ A A+F EM
Sbjct: 425 TYATLIDAFSKRMEPERALKLFQEMKEANVKPNNYCYSSLISAFCRAGYVERALAIFEEM 484

Query: 562 RRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQL 621
             +  VPD   +  L+D +GK   V KA+E Y+ M +  ++P+  T N+L+SA    G+ 
Sbjct: 485 THERIVPDVFAFNALIDGFGKLRQVDKAFEIYDRMRKLQIQPDRITFNALISA---SGKA 541

Query: 622 SDAYHLLQGMLNL----GLKPSLQTYTLLLSCCTEARSPYDMGFCHELMAVSGHPAHMFL 677
            ++   L+ M ++    GL P   +Y  L+  C ++          E M   G       
Sbjct: 542 KNSIRALEAMGDMTEIYGLTPDRHSYNALIDACGKSGDFTKAYEVFEEMRTKG------- 594

Query: 678 LSMPSPGPDGQNVRDHVGSFLEMMHSEDRESKRGLVDAVVDFLHKSGLKEEAGSVWEVAA 737
                       +R    +F  +++   R         +VD + + GL  +A ++  + +
Sbjct: 595 ------------IRPCTVTFNALIYGASRSHDLAASFKIVDLMLQEGLNPDAYTMNTLIS 642

Query: 738 QKNVYPD---------AVKEKGMSYWLINLHVMSDGTAVIALSRTLAWFRKQMLISGVGP 788
             N   D           K+ G+    +  +   D    +  S  +     +M   G+ P
Sbjct: 643 ACNRRQDLSTAFEVLEKFKQLGVHPDNVTFNTFIDAVGKLDSSEKMFELLSEMESRGISP 702

Query: 789 SRI---DIVTGWGRRSRVTGTSLVRQAVQELLHMF 820
           S++    IV   GRR ++         ++   HMF
Sbjct: 703 SKVTLNTIVGCCGRRGKI-------DLMERGFHMF 730



 Score = 97.8 bits (242), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 68/279 (24%), Positives = 126/279 (45%), Gaps = 1/279 (0%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQ-FGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANY 410
           R+   + D  T+  ++   G+A+    A+  + D     G  P+  +YN LI + G++  
Sbjct: 520 RKLQIQPDRITFNALISASGKAKNSIRALEAMGDMTEIYGLTPDRHSYNALIDACGKSGD 579

Query: 411 LNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSV 470
             +A +VF++M+  G  P  VT+  LI   +++  L  +  +   M   GL+PD +T + 
Sbjct: 580 FTKAYEVFEEMRTKGIRPCTVTFNALIYGASRSHDLAASFKIVDLMLQEGLNPDAYTMNT 639

Query: 471 IINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAG 530
           +I+   +   L  A ++  +    G  P+ VT+N  I    K  + +   +L  +M++ G
Sbjct: 640 LISACNRRQDLSTAFEVLEKFKQLGVHPDNVTFNTFIDAVGKLDSSEKMFELLSEMESRG 699

Query: 531 FEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAW 590
             P KVT + ++   G  G +D  E  F     K   PD   + LL++ +     + KA 
Sbjct: 700 ISPSKVTLNTIVGCCGRRGKIDLMERGFHMFHEKRLEPDSVTFSLLIENYVSHHLLDKAV 759

Query: 591 EWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQ 629
             Y    +  L  N      LL + +R  ++  A  +L+
Sbjct: 760 IAYHNCKRQQLELNSNVVMHLLESLIRKDEIEVAKLILK 798


>gi|224130702|ref|XP_002328355.1| predicted protein [Populus trichocarpa]
 gi|222838070|gb|EEE76435.1| predicted protein [Populus trichocarpa]
          Length = 608

 Score =  156 bits (394), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 93/298 (31%), Positives = 153/298 (51%), Gaps = 4/298 (1%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
            Q G K D  TY T++  L + R      + L +M+  G  PNV TYN ++H +     L
Sbjct: 220 EQNGCKPDVVTYNTIIDSLCKDRLVNDAMEFLSEMLDRGIPPNVFTYNCMVHGFCILGQL 279

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
           NEA  +FK+M      PD VT   L+D   K G +  A  +++ M   G+ P+  TY+ +
Sbjct: 280 NEATRLFKEMVGRDVMPDTVTLTILVDGLCKEGMVSEARLVFETMTEKGVEPNISTYNAL 339

Query: 472 IN--CLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNA 529
           ++  CL +   +  A ++F  M+ QGC P + +YNI+I    K+R    A  L  +M + 
Sbjct: 340 MDGYCLQRL--MNEAKKVFEIMIRQGCAPGVHSYNILINGFCKSRRMDEAKSLLAEMYHK 397

Query: 530 GFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKA 589
              PD VTYS +M+ L   G   EA  +F EM     +P+   Y +L+D + K G++ +A
Sbjct: 398 ALNPDTVTYSTLMQGLCQFGRPKEALNIFKEMCSYGLLPNLVTYSILLDGFCKHGHLDEA 457

Query: 590 WEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
            +  ++M +  L PN+     L+      G+L  A  L   +   G++P+++TYT+++
Sbjct: 458 LKLLKSMQEKKLEPNIVHHTILIEGMFIAGKLEVAKELFSKLFADGIRPTIRTYTVMI 515



 Score =  152 bits (385), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 88/288 (30%), Positives = 155/288 (53%), Gaps = 4/288 (1%)

Query: 362 TYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQM 421
           T+  ++  L    +     +L ++MVR G +PNV++YN +I+   +    + A+DVFK+M
Sbjct: 160 TFNALINGLCNEGKIKEAVELFNEMVRRGHEPNVISYNTIINGLCKTGNTSMAVDVFKKM 219

Query: 422 QVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHL 481
           +  GC+PD VTY T+ID   K   ++ AM+   +M   G+ P+ FTY+ +++     G L
Sbjct: 220 EQNGCKPDVVTYNTIIDSLCKDRLVNDAMEFLSEMLDRGIPPNVFTYNCMVHGFCILGQL 279

Query: 482 QAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIV 541
             A +LF EMV +  +P+ VT  I++    K      A  ++  M   G EP+  TY+ +
Sbjct: 280 NEATRLFKEMVGRDVMPDTVTLTILVDGLCKEGMVSEARLVFETMTEKGVEPNISTYNAL 339

Query: 542 MEVLGHC--GYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQA 599
           M+  G+C    ++EA+ VF  M R+   P    Y +L++ + K+  + +A      M   
Sbjct: 340 MD--GYCLQRLMNEAKKVFEIMIRQGCAPGVHSYNILINGFCKSRRMDEAKSLLAEMYHK 397

Query: 600 GLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
            L P+  T ++L+    + G+  +A ++ + M + GL P+L TY++LL
Sbjct: 398 ALNPDTVTYSTLMQGLCQFGRPKEALNIFKEMCSYGLLPNLVTYSILL 445



 Score =  145 bits (367), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 89/301 (29%), Positives = 150/301 (49%), Gaps = 1/301 (0%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           G  H+ ++   ++  L R         +L +M + G  P   T+N LI+       + EA
Sbjct: 118 GVTHNVYSLNVLINCLCRLNHVDFAVSILGKMFKLGIHPTASTFNALINGLCNEGKIKEA 177

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
           +++F +M   G EP+ ++Y T+I+   K G   +A+D++KKM+  G  PD  TY+ II+ 
Sbjct: 178 VELFNEMVRRGHEPNVISYNTIINGLCKTGNTSMAVDVFKKMEQNGCKPDVVTYNTIIDS 237

Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPD 534
           L K   +  A +   EM+++G  PN+ TYN M+           A +L+++M      PD
Sbjct: 238 LCKDRLVNDAMEFLSEMLDRGIPPNVFTYNCMVHGFCILGQLNEATRLFKEMVGRDVMPD 297

Query: 535 KVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYE 594
            VT +I+++ L   G + EA  VF  M  K   P+   Y  L+D +     + +A + +E
Sbjct: 298 TVTLTILVDGLCKEGMVSEARLVFETMTEKGVEPNISTYNALMDGYCLQRLMNEAKKVFE 357

Query: 595 AMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTY-TLLLSCCTEA 653
            M++ G  P V + N L++ F +  ++ +A  LL  M +  L P   TY TL+   C   
Sbjct: 358 IMIRQGCAPGVHSYNILINGFCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQFG 417

Query: 654 R 654
           R
Sbjct: 418 R 418



 Score =  143 bits (360), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 82/292 (28%), Positives = 150/292 (51%)

Query: 363 YTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQ 422
           +   +G   + +Q+  +  L +QM   G   NV + N LI+   R N+++ A+ +  +M 
Sbjct: 91  FGKFLGSFAKKKQYSTVVSLCNQMDLFGVTHNVYSLNVLINCLCRLNHVDFAVSILGKMF 150

Query: 423 VVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQ 482
            +G  P   T+  LI+     G +  A++++ +M   G  P+  +Y+ IIN L K G+  
Sbjct: 151 KLGIHPTASTFNALINGLCNEGKIKEAVELFNEMVRRGHEPNVISYNTIINGLCKTGNTS 210

Query: 483 AAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVM 542
            A  +F +M   GC P++VTYN +I    K R    A++   +M + G  P+  TY+ ++
Sbjct: 211 MAVDVFKKMEQNGCKPDVVTYNTIIDSLCKDRLVNDAMEFLSEMLDRGIPPNVFTYNCMV 270

Query: 543 EVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLR 602
                 G L+EA  +F EM  ++ +PD     +LVD   K G V +A   +E M + G+ 
Sbjct: 271 HGFCILGQLNEATRLFKEMVGRDVMPDTVTLTILVDGLCKEGMVSEARLVFETMTEKGVE 330

Query: 603 PNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEAR 654
           PN+ T N+L+  +     +++A  + + M+  G  P + +Y +L++   ++R
Sbjct: 331 PNISTYNALMDGYCLQRLMNEAKKVFEIMIRQGCAPGVHSYNILINGFCKSR 382



 Score =  140 bits (353), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 87/305 (28%), Positives = 155/305 (50%), Gaps = 1/305 (0%)

Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLI 402
           A+  FN + R+ G + +  +Y T++  L +         +  +M ++GC+P+VVTYN +I
Sbjct: 177 AVELFNEMVRR-GHEPNVISYNTIINGLCKTGNTSMAVDVFKKMEQNGCKPDVVTYNTII 235

Query: 403 HSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLS 462
            S  +   +N+A++   +M   G  P+  TY  ++      G L+ A  ++K+M    + 
Sbjct: 236 DSLCKDRLVNDAMEFLSEMLDRGIPPNVFTYNCMVHGFCILGQLNEATRLFKEMVGRDVM 295

Query: 463 PDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKL 522
           PDT T +++++ L K G +  A  +F  M  +G  PN+ TYN ++      R    A K+
Sbjct: 296 PDTVTLTILVDGLCKEGMVSEARLVFETMTEKGVEPNISTYNALMDGYCLQRLMNEAKKV 355

Query: 523 YRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGK 582
           +  M   G  P   +Y+I++        +DEA+++ AEM  K   PD   Y  L+    +
Sbjct: 356 FEIMIRQGCAPGVHSYNILINGFCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQ 415

Query: 583 AGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQT 642
            G  ++A   ++ M   GL PN+ T + LL  F + G L +A  LL+ M    L+P++  
Sbjct: 416 FGRPKEALNIFKEMCSYGLLPNLVTYSILLDGFCKHGHLDEALKLLKSMQEKKLEPNIVH 475

Query: 643 YTLLL 647
           +T+L+
Sbjct: 476 HTILI 480



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 87/289 (30%), Positives = 143/289 (49%)

Query: 359 DEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVF 418
           D  T T +V  L +         + + M   G +PN+ TYN L+  Y     +NEA  VF
Sbjct: 297 DTVTLTILVDGLCKEGMVSEARLVFETMTEKGVEPNISTYNALMDGYCLQRLMNEAKKVF 356

Query: 419 KQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKA 478
           + M   GC P   +Y  LI+   K+  +D A  +  +M    L+PDT TYS ++  L + 
Sbjct: 357 EIMIRQGCAPGVHSYNILINGFCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQF 416

Query: 479 GHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTY 538
           G  + A  +F EM + G +PNLVTY+I++    K  +   ALKL + MQ    EP+ V +
Sbjct: 417 GRPKEALNIFKEMCSYGLLPNLVTYSILLDGFCKHGHLDEALKLLKSMQEKKLEPNIVHH 476

Query: 539 SIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQ 598
           +I++E +   G L+ A+ +F+++      P    Y +++    K G   +A++ +  M  
Sbjct: 477 TILIEGMFIAGKLEVAKELFSKLFADGIRPTIRTYTVMIKGLLKEGLSDEAYDLFRKMED 536

Query: 599 AGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
            G  PN  + N ++  FL+    S A  L+  M+      +L T+ +LL
Sbjct: 537 DGFLPNSCSYNVMIQGFLQNQDSSTAIRLIDEMVGKRFSANLSTFQMLL 585



 Score =  110 bits (274), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 69/260 (26%), Positives = 127/260 (48%)

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
           + G + +  TY  ++      R      K+ + M+R GC P V +YN LI+ + ++  ++
Sbjct: 326 EKGVEPNISTYNALMDGYCLQRLMNEAKKVFEIMIRQGCAPGVHSYNILINGFCKSRRMD 385

Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
           EA  +  +M      PD VTY TL+    + G    A++++K+M + GL P+  TYS+++
Sbjct: 386 EAKSLLAEMYHKALNPDTVTYSTLMQGLCQFGRPKEALNIFKEMCSYGLLPNLVTYSILL 445

Query: 473 NCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFE 532
           +   K GHL  A +L   M  +   PN+V + I+I     A   + A +L+  +   G  
Sbjct: 446 DGFCKHGHLDEALKLLKSMQEKKLEPNIVHHTILIEGMFIAGKLEVAKELFSKLFADGIR 505

Query: 533 PDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEW 592
           P   TY+++++ L   G  DEA  +F +M    ++P+   Y +++  + +  +   A   
Sbjct: 506 PTIRTYTVMIKGLLKEGLSDEAYDLFRKMEDDGFLPNSCSYNVMIQGFLQNQDSSTAIRL 565

Query: 593 YEAMLQAGLRPNVPTCNSLL 612
            + M+      N+ T   LL
Sbjct: 566 IDEMVGKRFSANLSTFQMLL 585



 Score =  101 bits (251), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 78/336 (23%), Positives = 144/336 (42%)

Query: 411 LNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSV 470
           +++AL  F +M  +   P    +   +   AK       + +  +M   G++ + ++ +V
Sbjct: 69  IDDALASFYRMVRMNPRPSVAEFGKFLGSFAKKKQYSTVVSLCNQMDLFGVTHNVYSLNV 128

Query: 471 IINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAG 530
           +INCL +  H+  A  +  +M   G  P   T+N +I         + A++L+ +M   G
Sbjct: 129 LINCLCRLNHVDFAVSILGKMFKLGIHPTASTFNALINGLCNEGKIKEAVELFNEMVRRG 188

Query: 531 FEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAW 590
            EP+ ++Y+ ++  L   G    A  VF +M +    PD   Y  ++D   K   V  A 
Sbjct: 189 HEPNVISYNTIINGLCKTGNTSMAVDVFKKMEQNGCKPDVVTYNTIIDSLCKDRLVNDAM 248

Query: 591 EWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCC 650
           E+   ML  G+ PNV T N ++  F  +GQL++A  L + M+   + P   T T+L+   
Sbjct: 249 EFLSEMLDRGIPPNVFTYNCMVHGFCILGQLNEATRLFKEMVGRDVMPDTVTLTILVDGL 308

Query: 651 TEARSPYDMGFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRESKR 710
            +     +     E M   G   ++   +    G   Q + +      E+M  +      
Sbjct: 309 CKEGMVSEARLVFETMTEKGVEPNISTYNALMDGYCLQRLMNEAKKVFEIMIRQGCAPGV 368

Query: 711 GLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAV 746
              + +++   KS   +EA S+      K + PD V
Sbjct: 369 HSYNILINGFCKSRRMDEAKSLLAEMYHKALNPDTV 404



 Score = 97.8 bits (242), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 61/187 (32%), Positives = 105/187 (56%), Gaps = 2/187 (1%)

Query: 359 DEHTYTT-MVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDV 417
           D  TY+T M G+    R   A+N +  +M   G  PN+VTY+ L+  + +  +L+EAL +
Sbjct: 402 DTVTYSTLMQGLCQFGRPKEALN-IFKEMCSYGLLPNLVTYSILLDGFCKHGHLDEALKL 460

Query: 418 FKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGK 477
            K MQ    EP+ V +  LI+    AG L+VA +++ K+ A G+ P   TY+V+I  L K
Sbjct: 461 LKSMQEKKLEPNIVHHTILIEGMFIAGKLEVAKELFSKLFADGIRPTIRTYTVMIKGLLK 520

Query: 478 AGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVT 537
            G    A+ LF +M + G +PN  +YN+MI    + ++  +A++L  +M    F  +  T
Sbjct: 521 EGLSDEAYDLFRKMEDDGFLPNSCSYNVMIQGFLQNQDSSTAIRLIDEMVGKRFSANLST 580

Query: 538 YSIVMEV 544
           + +++++
Sbjct: 581 FQMLLDL 587


>gi|224079730|ref|XP_002305930.1| predicted protein [Populus trichocarpa]
 gi|222848894|gb|EEE86441.1| predicted protein [Populus trichocarpa]
          Length = 470

 Score =  156 bits (394), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 96/329 (29%), Positives = 161/329 (48%), Gaps = 35/329 (10%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           G + D++TYTT++  L +  +      L  +M   GCQ NVVTY+ LIHS  +   +NEA
Sbjct: 75  GCQPDDYTYTTIINGLCKIGETALAAGLFKKMEEAGCQLNVVTYSTLIHSLCKYRRVNEA 134

Query: 415 LDVFKQMQV-----------------------------------VGCEPDRVTYCTLIDI 439
           LD+F  M+                                    +   P+ VT+  L+D 
Sbjct: 135 LDIFSYMKAKDISPTIFTYTSLIQGLCNFSRWKEASALLNEMTSLNIMPNVVTFNVLVDT 194

Query: 440 HAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPN 499
             K G +  A  + K M   G+ PD  TY+ ++        +  A +LF  M+ +GC P+
Sbjct: 195 FCKEGKVLAAEGVLKTMTEMGVEPDVVTYNSLMYGYSMWTEVVEARKLFDVMITKGCKPD 254

Query: 500 LVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFA 559
           + +Y+I+I    KA+    A +L+ +M + G  P+ V+Y+ ++  L   G L EA+ +F 
Sbjct: 255 VFSYSILINGYCKAKRIDEAKQLFNEMIHQGSTPNNVSYNTLIHGLCQLGRLREAQDLFK 314

Query: 560 EMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVG 619
            M     +P+   Y +L+D + K G + KA+  + AM    L+PN+   N L++A  + G
Sbjct: 315 NMHTNGNLPNLYTYAILLDGFCKQGYLGKAFRLFRAMQSTYLKPNLVMYNILVNAMCKSG 374

Query: 620 QLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
            L DA  L   +  +GL+P++Q YT +++
Sbjct: 375 NLKDARELFSELFVIGLQPNVQIYTTIIN 403



 Score =  147 bits (372), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 90/305 (29%), Positives = 160/305 (52%), Gaps = 1/305 (0%)

Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLI 402
           AL  F++++ +        TYT+++  L    ++   + LL++M      PNVVT+N L+
Sbjct: 134 ALDIFSYMKAK-DISPTIFTYTSLIQGLCNFSRWKEASALLNEMTSLNIMPNVVTFNVLV 192

Query: 403 HSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLS 462
            ++ +   +  A  V K M  +G EPD VTY +L+  ++    +  A  ++  M   G  
Sbjct: 193 DTFCKEGKVLAAEGVLKTMTEMGVEPDVVTYNSLMYGYSMWTEVVEARKLFDVMITKGCK 252

Query: 463 PDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKL 522
           PD F+YS++IN   KA  +  A QLF EM++QG  PN V+YN +I    +    + A  L
Sbjct: 253 PDVFSYSILINGYCKAKRIDEAKQLFNEMIHQGSTPNNVSYNTLIHGLCQLGRLREAQDL 312

Query: 523 YRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGK 582
           +++M   G  P+  TY+I+++     GYL +A  +F  M+     P+  +Y +LV+   K
Sbjct: 313 FKNMHTNGNLPNLYTYAILLDGFCKQGYLGKAFRLFRAMQSTYLKPNLVMYNILVNAMCK 372

Query: 583 AGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQT 642
           +GN++ A E +  +   GL+PNV    ++++   + G L +A    + M + G  P   +
Sbjct: 373 SGNLKDARELFSELFVIGLQPNVQIYTTIINGLCKEGLLDEALEAFRNMEDDGCPPDEFS 432

Query: 643 YTLLL 647
           Y +++
Sbjct: 433 YNVII 437



 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 82/265 (30%), Positives = 134/265 (50%)

Query: 390 GCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVA 449
           G  PN  T N LI+ + +   ++    V  +   +G +P  VT+ TLI+   K G    A
Sbjct: 5   GLSPNTCTLNILINCFCQLQRVDLGFSVLAKGIKLGLQPTIVTFTTLINGLGKVGKFAQA 64

Query: 450 MDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIAL 509
           ++++  M A G  PD +TY+ IIN L K G    A  LF +M   GC  N+VTY+ +I  
Sbjct: 65  VELFDDMVARGCQPDDYTYTTIINGLCKIGETALAAGLFKKMEEAGCQLNVVTYSTLIHS 124

Query: 510 QAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPD 569
             K R    AL ++  M+     P   TY+ +++ L +     EA A+  EM   N +P+
Sbjct: 125 LCKYRRVNEALDIFSYMKAKDISPTIFTYTSLIQGLCNFSRWKEASALLNEMTSLNIMPN 184

Query: 570 EPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQ 629
              + +LVD + K G V  A    + M + G+ P+V T NSL+  +    ++ +A  L  
Sbjct: 185 VVTFNVLVDTFCKEGKVLAAEGVLKTMTEMGVEPDVVTYNSLMYGYSMWTEVVEARKLFD 244

Query: 630 GMLNLGLKPSLQTYTLLLSCCTEAR 654
            M+  G KP + +Y++L++   +A+
Sbjct: 245 VMITKGCKPDVFSYSILINGYCKAK 269



 Score =  131 bits (330), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 81/275 (29%), Positives = 139/275 (50%)

Query: 362 TYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQM 421
           T+  +V    +  +  A   +L  M   G +P+VVTYN L++ Y     + EA  +F  M
Sbjct: 187 TFNVLVDTFCKEGKVLAAEGVLKTMTEMGVEPDVVTYNSLMYGYSMWTEVVEARKLFDVM 246

Query: 422 QVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHL 481
              GC+PD  +Y  LI+ + KA  +D A  ++ +M   G +P+  +Y+ +I+ L + G L
Sbjct: 247 ITKGCKPDVFSYSILINGYCKAKRIDEAKQLFNEMIHQGSTPNNVSYNTLIHGLCQLGRL 306

Query: 482 QAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIV 541
           + A  LF  M   G +PNL TY I++    K      A +L+R MQ+   +P+ V Y+I+
Sbjct: 307 REAQDLFKNMHTNGNLPNLYTYAILLDGFCKQGYLGKAFRLFRAMQSTYLKPNLVMYNIL 366

Query: 542 MEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGL 601
           +  +   G L +A  +F+E+      P+  +Y  +++   K G + +A E +  M   G 
Sbjct: 367 VNAMCKSGNLKDARELFSELFVIGLQPNVQIYTTIINGLCKEGLLDEALEAFRNMEDDGC 426

Query: 602 RPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGL 636
            P+  + N ++  FL+    S A HL+  M + G 
Sbjct: 427 PPDEFSYNVIIRGFLQHKDESRAVHLIGEMRDRGF 461



 Score =  131 bits (329), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 91/346 (26%), Positives = 154/346 (44%), Gaps = 46/346 (13%)

Query: 354 AGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNE 413
           AG   +  T   ++    + ++      +L + ++ G QP +VT+  LI+  G+     +
Sbjct: 4   AGLSPNTCTLNILINCFCQLQRVDLGFSVLAKGIKLGLQPTIVTFTTLINGLGKVGKFAQ 63

Query: 414 ALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAG------------- 460
           A+++F  M   GC+PD  TY T+I+   K G   +A  ++KKM+ AG             
Sbjct: 64  AVELFDDMVARGCQPDDYTYTTIINGLCKIGETALAAGLFKKMEEAGCQLNVVTYSTLIH 123

Query: 461 ----------------------LSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIP 498
                                 +SP  FTY+ +I  L      + A  L  EM +   +P
Sbjct: 124 SLCKYRRVNEALDIFSYMKAKDISPTIFTYTSLIQGLCNFSRWKEASALLNEMTSLNIMP 183

Query: 499 NLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVF 558
           N+VT+N+++    K     +A  + + M   G EPD VTY+ +M        + EA  +F
Sbjct: 184 NVVTFNVLVDTFCKEGKVLAAEGVLKTMTEMGVEPDVVTYNSLMYGYSMWTEVVEARKLF 243

Query: 559 AEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRV 618
             M  K   PD   Y +L++ + KA  + +A + +  M+  G  PN  + N+L+    ++
Sbjct: 244 DVMITKGCKPDVFSYSILINGYCKAKRIDEAKQLFNEMIHQGSTPNNVSYNTLIHGLCQL 303

Query: 619 GQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGFCHE 664
           G+L +A  L + M   G  P+L TY +LL            GFC +
Sbjct: 304 GRLREAQDLFKNMHTNGNLPNLYTYAILLD-----------GFCKQ 338



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 69/217 (31%), Positives = 119/217 (54%), Gaps = 4/217 (1%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           G K D  +Y+ ++    +A++     +L ++M+  G  PN V+YN LIH   +   L EA
Sbjct: 250 GCKPDVFSYSILINGYCKAKRIDEAKQLFNEMIHQGSTPNNVSYNTLIHGLCQLGRLREA 309

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
            D+FK M   G  P+  TY  L+D   K G+L  A  +++ MQ+  L P+   Y++++N 
Sbjct: 310 QDLFKNMHTNGNLPNLYTYAILLDGFCKQGYLGKAFRLFRAMQSTYLKPNLVMYNILVNA 369

Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPD 534
           + K+G+L+ A +LF E+   G  PN+  Y  +I    K      AL+ +R+M++ G  PD
Sbjct: 370 MCKSGNLKDARELFSELFVIGLQPNVQIYTTIINGLCKEGLLDEALEAFRNMEDDGCPPD 429

Query: 535 KVTYSIVMEVLGHCGYLDEAEAV--FAEMRRKNWVPD 569
           + +Y++++   G   + DE+ AV    EMR + ++ D
Sbjct: 430 EFSYNVIIR--GFLQHKDESRAVHLIGEMRDRGFITD 464



 Score =  103 bits (256), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 79/289 (27%), Positives = 132/289 (45%), Gaps = 13/289 (4%)

Query: 421 MQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGH 480
           M++ G  P+  T   LI+   +   +D+   +  K    GL P   T++ +IN LGK G 
Sbjct: 1   MELAGLSPNTCTLNILINCFCQLQRVDLGFSVLAKGIKLGLQPTIVTFTTLINGLGKVGK 60

Query: 481 LQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSI 540
              A +LF +MV +GC P+  TY  +I    K      A  L++ M+ AG + + VTYS 
Sbjct: 61  FAQAVELFDDMVARGCQPDDYTYTTIINGLCKIGETALAAGLFKKMEEAGCQLNVVTYST 120

Query: 541 VMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAG 600
           ++  L     ++EA  +F+ M+ K+  P    Y  L+         ++A      M    
Sbjct: 121 LIHSLCKYRRVNEALDIFSYMKAKDISPTIFTYTSLIQGLCNFSRWKEASALLNEMTSLN 180

Query: 601 LRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL------SCCTEAR 654
           + PNV T N L+  F + G++  A  +L+ M  +G++P + TY  L+      +   EAR
Sbjct: 181 IMPNVVTFNVLVDTFCKEGKVLAAEGVLKTMTEMGVEPDVVTYNSLMYGYSMWTEVVEAR 240

Query: 655 SPYDMGFCHELMAVSGHPAHMFLLSMPSPG-PDGQNVRDHVGSFLEMMH 702
             +D      +M   G    +F  S+   G    + + +    F EM+H
Sbjct: 241 KLFD------VMITKGCKPDVFSYSILINGYCKAKRIDEAKQLFNEMIH 283


>gi|334182313|ref|NP_172058.2| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
 gi|334182315|ref|NP_001154307.2| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
 gi|122236365|sp|Q0WVK7.1|PPR12_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g05670, mitochondrial; Flags: Precursor
 gi|110741796|dbj|BAE98841.1| hypothetical protein [Arabidopsis thaliana]
 gi|332189752|gb|AEE27873.1| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
 gi|332189753|gb|AEE27874.1| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
          Length = 741

 Score =  156 bits (394), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 89/296 (30%), Positives = 148/296 (50%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           ++ G K + + Y +++G+L R  +     +   +M+R G  P+ V Y  LI  + +   +
Sbjct: 308 KRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDI 367

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
             A   F +M      PD +TY  +I    + G +  A  ++ +M   GL PD+ T++ +
Sbjct: 368 RAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTEL 427

Query: 472 INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF 531
           IN   KAGH++ A ++   M+  GC PN+VTY  +I    K  +  SA +L  +M   G 
Sbjct: 428 INGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGL 487

Query: 532 EPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWE 591
           +P+  TY+ ++  L   G ++EA  +  E        D   Y  L+D + K+G + KA E
Sbjct: 488 QPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQE 547

Query: 592 WYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
             + ML  GL+P + T N L++ F   G L D   LL  ML  G+ P+  T+  L+
Sbjct: 548 ILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLV 603



 Score =  149 bits (376), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 98/330 (29%), Positives = 163/330 (49%), Gaps = 11/330 (3%)

Query: 350 LRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRAN 409
           L    G+  D  +Y+T+V    R  +   + KL++ M R G +PN   Y  +I    R  
Sbjct: 271 LMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRIC 330

Query: 410 YLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYS 469
            L EA + F +M   G  PD V Y TLID   K G +  A   + +M +  ++PD  TY+
Sbjct: 331 KLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYT 390

Query: 470 VIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNA 529
            II+   + G +  A +LF EM  +G  P+ VT+  +I    KA + + A +++  M  A
Sbjct: 391 AIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQA 450

Query: 530 GFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKA 589
           G  P+ VTY+ +++ L   G LD A  +  EM +    P+   Y  +V+   K+GN+ +A
Sbjct: 451 GCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEA 510

Query: 590 WEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSC 649
            +       AGL  +  T  +L+ A+ + G++  A  +L+ ML  GL+P++ T+ +L++ 
Sbjct: 511 VKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMN- 569

Query: 650 CTEARSPYDMGFCHELMAVSGHPAHMFLLS 679
                     GFC   M   G     ++L+
Sbjct: 570 ----------GFCLHGMLEDGEKLLNWMLA 589



 Score =  147 bits (371), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 108/382 (28%), Positives = 178/382 (46%), Gaps = 9/382 (2%)

Query: 347 FNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYG 406
           F+ + RQ G   D   YTT++    +     A +K   +M      P+V+TY  +I  + 
Sbjct: 339 FSEMIRQ-GILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFC 397

Query: 407 RANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTF 466
           +   + EA  +F +M   G EPD VT+  LI+ + KAG +  A  ++  M  AG SP+  
Sbjct: 398 QIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVV 457

Query: 467 TYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDM 526
           TY+ +I+ L K G L +A++L  EM   G  PN+ TYN ++    K+ N + A+KL  + 
Sbjct: 458 TYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEF 517

Query: 527 QNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNV 586
           + AG   D VTY+ +M+     G +D+A+ +  EM  K   P    + +L++ +   G +
Sbjct: 518 EAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGML 577

Query: 587 RKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLL 646
               +    ML  G+ PN  T NSL+  +     L  A  + + M + G+ P  +TY  L
Sbjct: 578 EDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENL 637

Query: 647 LSCCTEARSPYDMGFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDR 706
           +    +AR+  +  F  + M   G    +   S+   G   +        FLE     D+
Sbjct: 638 VKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRK------KFLEAREVFDQ 691

Query: 707 ESKRGLV--DAVVDFLHKSGLK 726
             + GL     + DF   +  K
Sbjct: 692 MRREGLAADKEIFDFFSDTKYK 713



 Score =  143 bits (360), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 78/250 (31%), Positives = 133/250 (53%)

Query: 394 NVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMY 453
           NV +YN +IH   +   + EA  +   M++ G  PD ++Y T+++ + + G LD    + 
Sbjct: 245 NVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLI 304

Query: 454 KKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKA 513
           + M+  GL P+++ Y  II  L +   L  A + F EM+ QG +P+ V Y  +I    K 
Sbjct: 305 EVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKR 364

Query: 514 RNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVY 573
            + ++A K + +M +    PD +TY+ ++      G + EA  +F EM  K   PD   +
Sbjct: 365 GDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTF 424

Query: 574 GLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLN 633
             L++ + KAG+++ A+  +  M+QAG  PNV T  +L+    + G L  A  LL  M  
Sbjct: 425 TELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWK 484

Query: 634 LGLKPSLQTY 643
           +GL+P++ TY
Sbjct: 485 IGLQPNIFTY 494



 Score =  122 bits (307), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 79/280 (28%), Positives = 145/280 (51%), Gaps = 7/280 (2%)

Query: 370 LGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPD 429
           LGR ++    + LL  M   G  P+V++Y+ +++ Y R   L++   + + M+  G +P+
Sbjct: 259 LGRIKE---AHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPN 315

Query: 430 RVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFC 489
              Y ++I +  +   L  A + + +M   G+ PDT  Y+ +I+   K G ++AA + F 
Sbjct: 316 SYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFY 375

Query: 490 EMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHC- 548
           EM ++   P+++TY  +I+   +  +   A KL+ +M   G EPD VT++ ++   G+C 
Sbjct: 376 EMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELIN--GYCK 433

Query: 549 -GYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPT 607
            G++ +A  V   M +    P+   Y  L+D   K G++  A E    M + GL+PN+ T
Sbjct: 434 AGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFT 493

Query: 608 CNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
            NS+++   + G + +A  L+      GL     TYT L+
Sbjct: 494 YNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLM 533



 Score =  105 bits (262), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 70/281 (24%), Positives = 135/281 (48%)

Query: 449 AMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIA 508
           A+ ++++    G+  +  +Y+++I+ + + G ++ AH L   M  +G  P++++Y+ ++ 
Sbjct: 230 AIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVN 289

Query: 509 LQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVP 568
              +        KL   M+  G +P+   Y  ++ +L     L EAE  F+EM R+  +P
Sbjct: 290 GYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILP 349

Query: 569 DEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLL 628
           D  VY  L+D + K G++R A +++  M    + P+V T  +++S F ++G + +A  L 
Sbjct: 350 DTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLF 409

Query: 629 QGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGFCHELMAVSGHPAHMFLLSMPSPGPDGQ 688
             M   GL+P   T+T L++   +A    D    H  M  +G   ++   +    G   +
Sbjct: 410 HEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKE 469

Query: 689 NVRDHVGSFLEMMHSEDRESKRGLVDAVVDFLHKSGLKEEA 729
              D     L  M     +      +++V+ L KSG  EEA
Sbjct: 470 GDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEA 510


>gi|297830178|ref|XP_002882971.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297328811|gb|EFH59230.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 642

 Score =  156 bits (394), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 120/460 (26%), Positives = 201/460 (43%), Gaps = 47/460 (10%)

Query: 234 RRIVQPRSKAHSNRLNSNFKSNLQPSDAKVVECVSERFSKPS-REMKIPAGLAPFSRHFA 292
           R I+  RS +    L+  FK     ++ ++V+     FS P+  E + P      SR   
Sbjct: 7   RSILAKRSVSTLPYLSQRFKQ----TENEIVQM----FSIPNHEESEKPQEKWKLSRKDP 58

Query: 293 STGNVVESVSRILRQWKWGPLAEEALGNTNYSMDAYQANQVLKQLQDHTVALGFFNWLRR 352
           S   + E   RI++ +KWGP AE+AL      +D      +L+   +  V + FF W  +
Sbjct: 59  SVRMLDERFIRIVKIFKWGPDAEKALEVLKLKVDHRLVRSILEIDVEINVKIQFFKWAGK 118

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDG-CQPNVVTYNRLIHSYGRANYL 411
           +  F+HD  TY  ++  L  AR +G + + + ++VR+       V  + L+ + GRA  +
Sbjct: 119 RRNFQHDCSTYMALIRCLEEARLYGEMYRTIQEVVRNTYVSVGPVVLSELVKALGRAKMV 178

Query: 412 NEALDVFKQMQVVGCE------------------------------------PDRVTYCT 435
           ++AL VF Q +   C+                                    PD +TY  
Sbjct: 179 SKALSVFYQAKGRKCKPTSSTYNSVILMLMQEGQHEKVHEVYTEMCNEGDCFPDTITYSA 238

Query: 436 LIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQG 495
           LI  + K G  D A+ ++ +M+   + P    Y+ ++    K G ++ A  LF EM   G
Sbjct: 239 LISSYEKLGRNDSAIRLFDEMKDNCMQPTEKIYTTLLGIYFKVGKVEKALDLFEEMKRAG 298

Query: 496 CIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAE 555
           C P + TY  +I    KA   + A  LY++M   G  PD V  + +M +LG  G L+E  
Sbjct: 299 CSPTVYTYTELIKGLGKAGRVEEAYDLYKNMLTDGLTPDVVFLNNLMNILGKVGRLEELT 358

Query: 556 AVFAEMRRKNWVPDEPVYGLLVD-LWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSA 614
            VF EM      P    Y  ++  L+     V +   W++ M   G+ P+  T + L+  
Sbjct: 359 NVFNEMGTWRCTPTVVSYNTVIKALFESKAPVSEVSSWFDKMKADGVSPSEFTYSILIDG 418

Query: 615 FLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEAR 654
           + +  ++  A  LL+ M   G  P    Y  L++   +A+
Sbjct: 419 YCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAK 458



 Score =  147 bits (370), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 106/340 (31%), Positives = 168/340 (49%), Gaps = 16/340 (4%)

Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLI 402
           AL  F  ++R AG     +TYT ++  LG+A +      L   M+ DG  P+VV  N L+
Sbjct: 287 ALDLFEEMKR-AGCSPTVYTYTELIKGLGKAGRVEEAYDLYKNMLTDGLTPDVVFLNNLM 345

Query: 403 HSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLID--IHAKAGFLDVAMDMYKKMQAAG 460
           +  G+   L E  +VF +M    C P  V+Y T+I     +KA   +V+   + KM+A G
Sbjct: 346 NILGKVGRLEELTNVFNEMGTWRCTPTVVSYNTVIKALFESKAPVSEVS-SWFDKMKADG 404

Query: 461 LSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSAL 520
           +SP  FTYS++I+   K   ++ A  L  EM  +G  P    Y  +I    KA+ Y++A 
Sbjct: 405 VSPSEFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAAN 464

Query: 521 KLYRDM-QNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDL 579
           +L++++ +N G    +V Y+++++  G CG L EA  +F EM+ +   PD   Y  L+  
Sbjct: 465 ELFKELKENFGNVSSRV-YAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNALMSG 523

Query: 580 WGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPS 639
             KAG V +A      M + G   ++ + N +L+ F R G    A  + + M + G+KP 
Sbjct: 524 MVKAGMVNEANSLLRKMEENGCTADINSHNIILNGFARTGVPRRAIEMFETMKHCGIKPD 583

Query: 640 LQTYTLLLSCCTEA----------RSPYDMGFCHELMAVS 669
             TY  LL C   A          R   D GF ++ +  S
Sbjct: 584 GVTYNTLLGCFAHAGMFEEAARLMREMKDKGFEYDAITYS 623



 Score =  126 bits (317), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 86/329 (26%), Positives = 154/329 (46%), Gaps = 37/329 (11%)

Query: 362 TYTTMVGILGRARQFGAINKLLDQMVRDG-CQPNVVTYNRLIHSYGRANYLNEALDVFKQ 420
           TY +++ +L +  Q   ++++  +M  +G C P+ +TY+ LI SY +    + A+ +F +
Sbjct: 199 TYNSVILMLMQEGQHEKVHEVYTEMCNEGDCFPDTITYSALISSYEKLGRNDSAIRLFDE 258

Query: 421 MQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGH 480
           M+    +P    Y TL+ I+ K G ++ A+D++++M+ AG SP  +TY+ +I  LGKAG 
Sbjct: 259 MKDNCMQPTEKIYTTLLGIYFKVGKVEKALDLFEEMKRAGCSPTVYTYTELIKGLGKAGR 318

Query: 481 LQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSI 540
           ++ A+ L+  M+  G  P++V  N ++ +  K    +    ++ +M      P  V+Y+ 
Sbjct: 319 VEEAYDLYKNMLTDGLTPDVVFLNNLMNILGKVGRLEELTNVFNEMGTWRCTPTVVSYNT 378

Query: 541 VMEVLGHC-GYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQA 599
           V++ L      + E  + F +M+     P E  Y +L+D + K   V KA    E M + 
Sbjct: 379 VIKALFESKAPVSEVSSWFDKMKADGVSPSEFTYSILIDGYCKTNRVEKALLLLEEMDEK 438

Query: 600 GLRPNVPTCNSLLSA-----------------------------------FLRVGQLSDA 624
           G  P      SL++A                                   F + G+LS+A
Sbjct: 439 GFPPCPAAYCSLINALGKAKRYEAANELFKELKENFGNVSSRVYAVMIKHFGKCGKLSEA 498

Query: 625 YHLLQGMLNLGLKPSLQTYTLLLSCCTEA 653
             L   M N G  P +  Y  L+S   +A
Sbjct: 499 VDLFNEMKNQGSGPDVYAYNALMSGMVKA 527



 Score =  110 bits (274), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 57/195 (29%), Positives = 110/195 (56%)

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
           + GF      Y +++  LG+A+++ A N+L  ++  +    +   Y  +I  +G+   L+
Sbjct: 437 EKGFPPCPAAYCSLINALGKAKRYEAANELFKELKENFGNVSSRVYAVMIKHFGKCGKLS 496

Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
           EA+D+F +M+  G  PD   Y  L+    KAG ++ A  + +KM+  G + D  ++++I+
Sbjct: 497 EAVDLFNEMKNQGSGPDVYAYNALMSGMVKAGMVNEANSLLRKMEENGCTADINSHNIIL 556

Query: 473 NCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFE 532
           N   + G  + A ++F  M + G  P+ VTYN ++   A A  ++ A +L R+M++ GFE
Sbjct: 557 NGFARTGVPRRAIEMFETMKHCGIKPDGVTYNTLLGCFAHAGMFEEAARLMREMKDKGFE 616

Query: 533 PDKVTYSIVMEVLGH 547
            D +TYS +++ +G+
Sbjct: 617 YDAITYSSILDAVGN 631



 Score =  106 bits (264), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 71/254 (27%), Positives = 119/254 (46%), Gaps = 1/254 (0%)

Query: 362 TYTTMVGILGRARQ-FGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQ 420
           +Y T++  L  ++     ++   D+M  DG  P+  TY+ LI  Y + N + +AL + ++
Sbjct: 375 SYNTVIKALFESKAPVSEVSSWFDKMKADGVSPSEFTYSILIDGYCKTNRVEKALLLLEE 434

Query: 421 MQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGH 480
           M   G  P    YC+LI+   KA   + A +++K+++    +  +  Y+V+I   GK G 
Sbjct: 435 MDEKGFPPCPAAYCSLINALGKAKRYEAANELFKELKENFGNVSSRVYAVMIKHFGKCGK 494

Query: 481 LQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSI 540
           L  A  LF EM NQG  P++  YN +++   KA     A  L R M+  G   D  +++I
Sbjct: 495 LSEAVDLFNEMKNQGSGPDVYAYNALMSGMVKAGMVNEANSLLRKMEENGCTADINSHNI 554

Query: 541 VMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAG 600
           ++      G    A  +F  M+     PD   Y  L+  +  AG   +A      M   G
Sbjct: 555 ILNGFARTGVPRRAIEMFETMKHCGIKPDGVTYNTLLGCFAHAGMFEEAARLMREMKDKG 614

Query: 601 LRPNVPTCNSLLSA 614
              +  T +S+L A
Sbjct: 615 FEYDAITYSSILDA 628



 Score =  103 bits (256), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 62/228 (27%), Positives = 116/228 (50%), Gaps = 2/228 (0%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           G    E TY+ ++    +  +      LL++M   G  P    Y  LI++ G+A     A
Sbjct: 404 GVSPSEFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAA 463

Query: 415 LDVFKQMQV-VGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIIN 473
            ++FK+++   G    RV Y  +I    K G L  A+D++ +M+  G  PD + Y+ +++
Sbjct: 464 NELFKELKENFGNVSSRV-YAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNALMS 522

Query: 474 CLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEP 533
            + KAG +  A+ L  +M   GC  ++ ++NI++   A+    + A++++  M++ G +P
Sbjct: 523 GMVKAGMVNEANSLLRKMEENGCTADINSHNIILNGFARTGVPRRAIEMFETMKHCGIKP 582

Query: 534 DKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWG 581
           D VTY+ ++    H G  +EA  +  EM+ K +  D   Y  ++D  G
Sbjct: 583 DGVTYNTLLGCFAHAGMFEEAARLMREMKDKGFEYDAITYSSILDAVG 630



 Score = 77.0 bits (188), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 40/138 (28%), Positives = 73/138 (52%), Gaps = 1/138 (0%)

Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLI 402
           A+  FN ++ Q G   D + Y  ++  + +A      N LL +M  +GC  ++ ++N ++
Sbjct: 498 AVDLFNEMKNQ-GSGPDVYAYNALMSGMVKAGMVNEANSLLRKMEENGCTADINSHNIIL 556

Query: 403 HSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLS 462
           + + R      A+++F+ M+  G +PD VTY TL+   A AG  + A  + ++M+  G  
Sbjct: 557 NGFARTGVPRRAIEMFETMKHCGIKPDGVTYNTLLGCFAHAGMFEEAARLMREMKDKGFE 616

Query: 463 PDTFTYSVIINCLGKAGH 480
            D  TYS I++ +G   H
Sbjct: 617 YDAITYSSILDAVGNMDH 634


>gi|356544378|ref|XP_003540629.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g59900-like [Glycine max]
          Length = 903

 Score =  155 bits (393), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 113/418 (27%), Positives = 191/418 (45%), Gaps = 24/418 (5%)

Query: 336 QLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAIN---KLLDQMVRDGCQ 392
           QL D  V LGF               T   + G++   R+ G I+   +L+ ++ R G  
Sbjct: 316 QLMDEMVELGF-------------SPTEAAVSGLVDGLRKQGKIDDAYELVVKVGRFGFV 362

Query: 393 PNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDM 452
           PN+  YN LI+S  +   L++A  ++  M ++   P+ +TY  LID   ++G LDVA+  
Sbjct: 363 PNLFVYNALINSLCKGGDLDKAELLYSNMSLMNLRPNGITYSILIDSFCRSGRLDVAISY 422

Query: 453 YKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAK 512
           + +M   G+    + Y+ +IN   K G L AA  LF EM N+G  P   T+  +I+   K
Sbjct: 423 FDRMIQDGIGETVYAYNSLINGQCKFGDLSAAESLFIEMTNKGVEPTATTFTSLISGYCK 482

Query: 513 ARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPV 572
               Q A KLY  M + G  P+  T++ ++  L     + EA  +F E+  +   P E  
Sbjct: 483 DLQVQKAFKLYNKMIDNGITPNVYTFTALISGLCSTNKMAEASELFDELVERKIKPTEVT 542

Query: 573 YGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGML 632
           Y +L++ + + G + KA+E  E M Q GL P+  T   L+S     G++S A   +  + 
Sbjct: 543 YNVLIEGYCRDGKIDKAFELLEDMHQKGLVPDTYTYRPLISGLCSTGRVSKAKDFIDDLH 602

Query: 633 NLGLKPSLQTYTLLL-SCCTEARSPYDMGFCHELMAVSGH---PAHMFLLSMPSPGPDGQ 688
              +K +   Y+ LL   C E R    +    E++    +     H  L+      PD +
Sbjct: 603 KQNVKLNEMCYSALLHGYCQEGRLMEALSASCEMIQRGINMDLVCHAVLIDGALKQPDRK 662

Query: 689 NVRDHVGSFLEMMHSEDRESKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAV 746
              D     L+ MH +       +  +++D   K G  ++A   W++   +  +P+ V
Sbjct: 663 TFFD----LLKDMHDQGLRPDNVIYTSMIDTYSKEGSFKKAFECWDLMVTEECFPNVV 716



 Score =  122 bits (305), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 83/300 (27%), Positives = 136/300 (45%), Gaps = 2/300 (0%)

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
           Q G   D +TY  ++  L    +       +D + +   + N + Y+ L+H Y +   L 
Sbjct: 568 QKGLVPDTYTYRPLISGLCSTGRVSKAKDFIDDLHKQNVKLNEMCYSALLHGYCQEGRLM 627

Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
           EAL    +M   G   D V +  LID   K        D+ K M   GL PD   Y+ +I
Sbjct: 628 EALSASCEMIQRGINMDLVCHAVLIDGALKQPDRKTFFDLLKDMHDQGLRPDNVIYTSMI 687

Query: 473 NCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFE 532
           +   K G  + A + +  MV + C PN+VTY  ++    KA     A  L++ MQ A   
Sbjct: 688 DTYSKEGSFKKAFECWDLMVTEECFPNVVTYTALMNGLCKAGEMDRAGLLFKRMQAANVP 747

Query: 533 PDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEW 592
           P+ +TY   ++ L   G + EA  +   M  K  + +   + +++  + K G   +A + 
Sbjct: 748 PNSITYGCFLDNLTKEGNMKEAIGLHHAM-LKGLLANTVTHNIIIRGFCKLGRFHEATKV 806

Query: 593 YEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL-SCCT 651
              M + G+ P+  T ++L+  + R G +  +  L   MLN GL+P L  Y LL+  CC 
Sbjct: 807 LSEMTENGIFPDCVTYSTLIYEYCRSGNVGASVKLWDTMLNRGLEPDLVAYNLLIYGCCV 866



 Score =  121 bits (304), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 84/328 (25%), Positives = 142/328 (43%), Gaps = 36/328 (10%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           G   + +T+T ++  L    +    ++L D++V    +P  VTYN LI  Y R   +++A
Sbjct: 500 GITPNVYTFTALISGLCSTNKMAEASELFDELVERKIKPTEVTYNVLIEGYCRDGKIDKA 559

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
            ++ + M   G  PD  TY  LI      G +  A D    +    +  +   YS +++ 
Sbjct: 560 FELLEDMHQKGLVPDTYTYRPLISGLCSTGRVSKAKDFIDDLHKQNVKLNEMCYSALLHG 619

Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPD 534
             + G L  A    CEM+ +G   +LV + ++I    K  + ++   L +DM + G  PD
Sbjct: 620 YCQEGRLMEALSASCEMIQRGINMDLVCHAVLIDGALKQPDRKTFFDLLKDMHDQGLRPD 679

Query: 535 K-----------------------------------VTYSIVMEVLGHCGYLDEAEAVFA 559
                                               VTY+ +M  L   G +D A  +F 
Sbjct: 680 NVIYTSMIDTYSKEGSFKKAFECWDLMVTEECFPNVVTYTALMNGLCKAGEMDRAGLLFK 739

Query: 560 EMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVG 619
            M+  N  P+   YG  +D   K GN+++A   + AML+ GL  N  T N ++  F ++G
Sbjct: 740 RMQAANVPPNSITYGCFLDNLTKEGNMKEAIGLHHAMLK-GLLANTVTHNIIIRGFCKLG 798

Query: 620 QLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
           +  +A  +L  M   G+ P   TY+ L+
Sbjct: 799 RFHEATKVLSEMTENGIFPDCVTYSTLI 826



 Score =  118 bits (295), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 72/228 (31%), Positives = 118/228 (51%), Gaps = 7/228 (3%)

Query: 346 FFNWLR--RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIH 403
           FF+ L+     G + D   YT+M+    +   F    +  D MV + C PNVVTY  L++
Sbjct: 664 FFDLLKDMHDQGLRPDNVIYTSMIDTYSKEGSFKKAFECWDLMVTEECFPNVVTYTALMN 723

Query: 404 SYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSP 463
              +A  ++ A  +FK+MQ     P+ +TY   +D   K G +  A+ ++  M   GL  
Sbjct: 724 GLCKAGEMDRAGLLFKRMQAANVPPNSITYGCFLDNLTKEGNMKEAIGLHHAM-LKGLLA 782

Query: 464 DTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLY 523
           +T T+++II    K G    A ++  EM   G  P+ VTY+ +I    ++ N  +++KL+
Sbjct: 783 NTVTHNIIIRGFCKLGRFHEATKVLSEMTENGIFPDCVTYSTLIYEYCRSGNVGASVKLW 842

Query: 524 RDMQNAGFEPDKVTYSIVMEVLGHC--GYLDEAEAVFAEMRRKNWVPD 569
             M N G EPD V Y+++  + G C  G LD+A  +  +M R+  +PD
Sbjct: 843 DTMLNRGLEPDLVAYNLL--IYGCCVNGELDKAFELRDDMLRRGIIPD 888



 Score =  117 bits (293), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 93/369 (25%), Positives = 163/369 (44%), Gaps = 12/369 (3%)

Query: 284 LAPFSRHFASTGNVVESVSRILRQWKWGPLAEEALGNTNYSMDAYQANQVLK---QLQDH 340
           L P  R  ++  N +  V + +  W+   L +E++ N     D Y  + V++   +L+D 
Sbjct: 186 LLPEVRTLSALLNGLLKVRKFITVWE---LFDESV-NAGVRPDPYTCSAVVRSMCELKDF 241

Query: 341 TVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNR 400
             A     W+    GF     TY  ++  L +  +     ++   +   G   +VVTY  
Sbjct: 242 LRAKEKIRWMEAN-GFDLSIVTYNVLIHGLCKGDRVSEAVEVKRSLGGKGLAADVVTYCT 300

Query: 401 LIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAG 460
           L+  + R       + +  +M  +G  P       L+D   K G +D A ++  K+   G
Sbjct: 301 LVLGFCRLQQFEAGIQLMDEMVELGFSPTEAAVSGLVDGLRKQGKIDDAYELVVKVGRFG 360

Query: 461 LSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSAL 520
             P+ F Y+ +IN L K G L  A  L+  M      PN +TY+I+I    ++     A+
Sbjct: 361 FVPNLFVYNALINSLCKGGDLDKAELLYSNMSLMNLRPNGITYSILIDSFCRSGRLDVAI 420

Query: 521 KLYRDMQNAGFEPDKVTYSIVMEVLGHC--GYLDEAEAVFAEMRRKNWVPDEPVYGLLVD 578
             +  M   G       Y+ ++   G C  G L  AE++F EM  K   P    +  L+ 
Sbjct: 421 SYFDRMIQDGIGETVYAYNSLIN--GQCKFGDLSAAESLFIEMTNKGVEPTATTFTSLIS 478

Query: 579 LWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKP 638
            + K   V+KA++ Y  M+  G+ PNV T  +L+S      ++++A  L   ++   +KP
Sbjct: 479 GYCKDLQVQKAFKLYNKMIDNGITPNVYTFTALISGLCSTNKMAEASELFDELVERKIKP 538

Query: 639 SLQTYTLLL 647
           +  TY +L+
Sbjct: 539 TEVTYNVLI 547



 Score =  111 bits (277), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 96/438 (21%), Positives = 179/438 (40%), Gaps = 58/438 (13%)

Query: 362 TYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQM 421
           TY+ ++    R+ +        D+M++DG    V  YN LI+   +   L+ A  +F +M
Sbjct: 402 TYSILIDSFCRSGRLDVAISYFDRMIQDGIGETVYAYNSLINGQCKFGDLSAAESLFIEM 461

Query: 422 QVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHL 481
              G EP   T+ +LI  + K   +  A  +Y KM   G++P+ +T++ +I+ L     +
Sbjct: 462 TNKGVEPTATTFTSLISGYCKDLQVQKAFKLYNKMIDNGITPNVYTFTALISGLCSTNKM 521

Query: 482 QAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIV 541
             A +LF E+V +   P  VTYN++I    +      A +L  DM   G  PD  TY  +
Sbjct: 522 AEASELFDELVERKIKPTEVTYNVLIEGYCRDGKIDKAFELLEDMHQKGLVPDTYTYRPL 581

Query: 542 MEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKA------------ 589
           +  L   G + +A+    ++ ++N   +E  Y  L+  + + G + +A            
Sbjct: 582 ISGLCSTGRVSKAKDFIDDLHKQNVKLNEMCYSALLHGYCQEGRLMEALSASCEMIQRGI 641

Query: 590 -----------------------WEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYH 626
                                  ++  + M   GLRP+     S++  + + G    A+ 
Sbjct: 642 NMDLVCHAVLIDGALKQPDRKTFFDLLKDMHDQGLRPDNVIYTSMIDTYSKEGSFKKAFE 701

Query: 627 LLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGFCHELMAVSGHPAH-----MFLLSMP 681
               M+     P++ TYT L++   +A      G   + M  +  P +      FL ++ 
Sbjct: 702 CWDLMVTEECFPNVVTYTALMNGLCKAGEMDRAGLLFKRMQAANVPPNSITYGCFLDNLT 761

Query: 682 SPGPDGQNVRDHVGSFLEMMHSEDRESKRGLV------DAVVDFLHKSGLKEEAGSVWEV 735
             G    N+++ +G    M+        +GL+      + ++    K G   EA  V   
Sbjct: 762 KEG----NMKEAIGLHHAML--------KGLLANTVTHNIIIRGFCKLGRFHEATKVLSE 809

Query: 736 AAQKNVYPDAVKEKGMSY 753
             +  ++PD V    + Y
Sbjct: 810 MTENGIFPDCVTYSTLIY 827



 Score =  107 bits (267), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 78/304 (25%), Positives = 141/304 (46%), Gaps = 11/304 (3%)

Query: 362 TYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQM 421
           T + ++  L + R+F  + +L D+ V  G +P+  T + ++ S         A +  + M
Sbjct: 192 TLSALLNGLLKVRKFITVWELFDESVNAGVRPDPYTCSAVVRSMCELKDFLRAKEKIRWM 251

Query: 422 QVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHL 481
           +  G +   VTY  LI    K   +  A+++ + +   GL+ D  TY  ++    +    
Sbjct: 252 EANGFDLSIVTYNVLIHGLCKGDRVSEAVEVKRSLGGKGLAADVVTYCTLVLGFCRLQQF 311

Query: 482 QAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIV 541
           +A  QL  EMV  G  P     + ++    K      A +L   +   GF P+   Y+ +
Sbjct: 312 EAGIQLMDEMVELGFSPTEAAVSGLVDGLRKQGKIDDAYELVVKVGRFGFVPNLFVYNAL 371

Query: 542 MEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGL 601
           +  L   G LD+AE +++ M   N  P+   Y +L+D + ++G +  A  +++ M+Q G+
Sbjct: 372 INSLCKGGDLDKAELLYSNMSLMNLRPNGITYSILIDSFCRSGRLDVAISYFDRMIQDGI 431

Query: 602 RPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGF 661
              V   NSL++   + G LS A  L   M N G++P+  T+T L+S           G+
Sbjct: 432 GETVYAYNSLINGQCKFGDLSAAESLFIEMTNKGVEPTATTFTSLIS-----------GY 480

Query: 662 CHEL 665
           C +L
Sbjct: 481 CKDL 484



 Score = 98.6 bits (244), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 91/353 (25%), Positives = 151/353 (42%), Gaps = 25/353 (7%)

Query: 324 SMDAYQANQVL-KQLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKL 382
           ++  +   QVL   L D  +AL FFN+L       H   +Y  MV  L  +R F   N L
Sbjct: 66  TLRPHHVEQVLMNTLDDAKLALRFFNFLGLHKNMNHSTTSYAIMVHALVHSRLFWPANSL 125

Query: 383 LDQMVRDGCQPNVVT-----------------YNRLIHSYGRANYLNEALDVFKQMQVVG 425
           L  ++     P  V                  +N L+ +Y  ++ + +A+ + K M    
Sbjct: 126 LHTLLLRESHPKCVFSHFLDSYKRCKFSSTLGFNLLVQNYVLSSRIFDAVVIVKLMFANN 185

Query: 426 CEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAH 485
             P+  T   L++   K        +++ +   AG+ PD +T S ++  + +      A 
Sbjct: 186 LLPEVRTLSALLNGLLKVRKFITVWELFDESVNAGVRPDPYTCSAVVRSMCELKDFLRAK 245

Query: 486 QLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVL 545
           +    M   G   ++VTYN++I    K      A+++ R +   G   D VTY  +  VL
Sbjct: 246 EKIRWMEANGFDLSIVTYNVLIHGLCKGDRVSEAVEVKRSLGGKGLAADVVTYCTL--VL 303

Query: 546 GHCGYLDEAEA---VFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLR 602
           G C  L + EA   +  EM    + P E     LVD   K G +  A+E    + + G  
Sbjct: 304 GFC-RLQQFEAGIQLMDEMVELGFSPTEAAVSGLVDGLRKQGKIDDAYELVVKVGRFGFV 362

Query: 603 PNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL-SCCTEAR 654
           PN+   N+L+++  + G L  A  L   M  + L+P+  TY++L+ S C   R
Sbjct: 363 PNLFVYNALINSLCKGGDLDKAELLYSNMSLMNLRPNGITYSILIDSFCRSGR 415


>gi|296081308|emb|CBI17752.3| unnamed protein product [Vitis vinifera]
          Length = 729

 Score =  155 bits (393), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 118/490 (24%), Positives = 211/490 (43%), Gaps = 38/490 (7%)

Query: 276 REMKIPAGLAPFSRHFASTGNVVESVSRILRQWK----WGPLAEEALGNTNYSMDAYQAN 331
           + + IP    P  R F    N+      I   ++    WGP     L           A 
Sbjct: 65  KALAIPPSKTPCERFFDIAKNLSPIARYICDSFRKHRNWGPPVVADLNKLRRVTPVLVA- 123

Query: 332 QVLKQLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGC 391
           +VLK   D  +   FF+W  +Q G+KH+  +Y      L R+ QF A +++ + M   G 
Sbjct: 124 EVLKVQTDPVICSKFFHWAGKQKGYKHNFASYNAFAYCLNRSNQFRAADQVPELMNMQGK 183

Query: 392 QPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMD 451
            P+   +  LI  +  AN       V+++M+  G +P    Y  ++D   K G LD+AM 
Sbjct: 184 PPSEKQFEILIRMHIDANRGLRVYYVYEKMKKFGIKPRVFLYNRIMDGLVKTGHLDLAMS 243

Query: 452 MYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQA 511
           +Y+  +  GL  ++ TY +++  L KAG +    +L   M    C P++  Y  M+ +  
Sbjct: 244 VYEDFKEDGLVEESVTYMILVKGLCKAGRIDEVLELLDRMRGNLCKPDVFAYTAMVKVLV 303

Query: 512 KARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEP 571
              N    L+++ +M+    EPD + Y+ ++  L +   + E   +F EM++K ++ D  
Sbjct: 304 AEGNLDGCLRVWEEMRKDKVEPDVMAYTTLVAALCNGNRVGEGFELFKEMKQKKYLIDRA 363

Query: 572 VYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGM 631
           +YG L++ +     V  A +  + ++ +G R ++   NSL+     V Q+  AY L Q  
Sbjct: 364 IYGSLIEGFVVNERVGSACDLLKDLMDSGYRADLAIYNSLIEGMCNVKQVDKAYKLFQVT 423

Query: 632 LNLGLKPSLQTYTLLLSCCTEARSPYDMGFCHELMAVSGHPAHMFLLSMPSPGPDGQNVR 691
           ++  L+P+  T   +L    E +   D  FC  L         M  L  P        V 
Sbjct: 424 VHESLEPNFLTVKPMLVSYAEMKRMDD--FCSLL-------GQMQKLGFP--------VI 466

Query: 692 DHVGSFLEMMHSEDRESKRGL----------------VDAVVDFLHKSGLKEEAGSVWEV 735
           D +  F  +M  +    K  L                 + +++ +H++G  ++A S+++ 
Sbjct: 467 DDLSKFFSVMIEKGERLKLALEVFEHLKAKGYCSISIYNILMEAIHRTGEVKKALSLFDD 526

Query: 736 AAQKNVYPDA 745
               N  PD+
Sbjct: 527 IKDSNFKPDS 536



 Score = 91.7 bits (226), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 78/352 (22%), Positives = 146/352 (41%), Gaps = 36/352 (10%)

Query: 357 KHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALD 416
           K D   YT MV +L          ++ ++M +D  +P+V+ Y  L+ +    N + E  +
Sbjct: 289 KPDVFAYTAMVKVLVAEGNLDGCLRVWEEMRKDKVEPDVMAYTTLVAALCNGNRVGEGFE 348

Query: 417 VFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLG 476
           +FK+M+      DR  Y +LI+       +  A D+ K +  +G   D   Y+ +I  + 
Sbjct: 349 LFKEMKQKKYLIDRAIYGSLIEGFVVNERVGSACDLLKDLMDSGYRADLAIYNSLIEGMC 408

Query: 477 KAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF----- 531
               +  A++LF   V++   PN +T   M+   A+ +       L   MQ  GF     
Sbjct: 409 NVKQVDKAYKLFQVTVHESLEPNFLTVKPMLVSYAEMKRMDDFCSLLGQMQKLGFPVIDD 468

Query: 532 ------------EPDKV-----------------TYSIVMEVLGHCGYLDEAEAVFAEMR 562
                       E  K+                  Y+I+ME +   G + +A ++F +++
Sbjct: 469 LSKFFSVMIEKGERLKLALEVFEHLKAKGYCSISIYNILMEAIHRTGEVKKALSLFDDIK 528

Query: 563 RKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLS 622
             N+ PD   Y   +  + + G+V++A   Y  +++    P+V    SL+    +  ++ 
Sbjct: 529 DSNFKPDSSTYSNAIICFVEVGDVQEACACYNKIIEMCQLPSVAAYRSLVKGLCKSEEID 588

Query: 623 DAYHLLQGML-NLGLKPSLQTYTL-LLSCCTEARSPYDMGFCHELMAVSGHP 672
            A  L++  L N+   P    YTL +L  C    +   +   +E+M     P
Sbjct: 589 AAIMLVRDCLANVTSGPMEFKYTLTILHACKSGNAEKVIDVLNEMMQEGCTP 640



 Score = 66.6 bits (161), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 58/282 (20%), Positives = 123/282 (43%), Gaps = 8/282 (2%)

Query: 354 AGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNE 413
           +G++ D   Y +++  +   +Q     KL    V +  +PN +T   ++ SY     +++
Sbjct: 391 SGYRADLAIYNSLIEGMCNVKQVDKAYKLFQVTVHESLEPNFLTVKPMLVSYAEMKRMDD 450

Query: 414 ALDVFKQMQVVG---CEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSV 470
              +  QMQ +G    +     +  +I+   K   L +A+++++ ++A G    +  Y++
Sbjct: 451 FCSLLGQMQKLGFPVIDDLSKFFSVMIE---KGERLKLALEVFEHLKAKGYCSISI-YNI 506

Query: 471 IINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAG 530
           ++  + + G ++ A  LF ++ +    P+  TY+  I    +  + Q A   Y  +    
Sbjct: 507 LMEAIHRTGEVKKALSLFDDIKDSNFKPDSSTYSNAIICFVEVGDVQEACACYNKIIEMC 566

Query: 531 FEPDKVTYSIVMEVLGHCGYLDEAEAVFAE-MRRKNWVPDEPVYGLLVDLWGKAGNVRKA 589
             P    Y  +++ L     +D A  +  + +      P E  Y L +    K+GN  K 
Sbjct: 567 QLPSVAAYRSLVKGLCKSEEIDAAIMLVRDCLANVTSGPMEFKYTLTILHACKSGNAEKV 626

Query: 590 WEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGM 631
            +    M+Q G  P+  T ++L+S   + G L +A  +   M
Sbjct: 627 IDVLNEMMQEGCTPDEVTYSALISGMCKHGTLEEARKVFSNM 668


>gi|297806463|ref|XP_002871115.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297316952|gb|EFH47374.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 942

 Score =  155 bits (393), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 86/319 (26%), Positives = 164/319 (51%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           ++ G KH+  TY+ M+    + + +     + + MV++G +P+V+ YN +I ++     +
Sbjct: 512 KEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGMKPDVILYNNIIAAFCGMGNM 571

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
           + A+   K+MQ +   P   T+  +I+  AK+G +  +++++  M+  G  P   T++ +
Sbjct: 572 DRAIQTVKEMQKLRHRPTTRTFMPIINGFAKSGDMRRSLEVFDMMRRCGCVPTVHTFNAL 631

Query: 472 INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF 531
           IN L +   ++ A ++  EM   G   N  TY  ++   A   +   A + +  +QN G 
Sbjct: 632 INGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGL 691

Query: 532 EPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWE 591
           E D  TY  +++     G +  A AV  EM  +N   +  VY +L+D W + G+V +A +
Sbjct: 692 EVDIFTYEALLKACCKSGRMQSALAVTKEMSARNIPRNSFVYNILIDGWARRGDVWEAAD 751

Query: 592 WYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCT 651
             + M + G++P++ T  S +SA  + G ++ A   ++ M  LG+KP+++TYT L+    
Sbjct: 752 LIQQMKKEGVKPDIHTYTSFISACSKAGDMNRATQTIEEMEALGVKPNIKTYTTLIKGWA 811

Query: 652 EARSPYDMGFCHELMAVSG 670
            A  P     C+E M   G
Sbjct: 812 RASLPEKALSCYEEMKAVG 830



 Score =  119 bits (298), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 69/296 (23%), Positives = 143/296 (48%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           ++ G +    TY+ +VG   +A    A +   D+  R     N   Y ++I+++ +   +
Sbjct: 372 KEEGIEMSLVTYSVIVGGFSKAGNAEAADHWFDEAKRIHKTLNASIYGKIIYAHCQTCNM 431

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
             A  + ++M+  G +     Y T++D +         + ++K+++  G +P   TY  +
Sbjct: 432 ERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLIVFKRLKECGFTPTVVTYGCL 491

Query: 472 INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF 531
           IN   K G +  A ++   M  +G   NL TY++MI    K +++ +A  ++ DM   G 
Sbjct: 492 INLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGM 551

Query: 532 EPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWE 591
           +PD + Y+ ++      G +D A     EM++    P    +  +++ + K+G++R++ E
Sbjct: 552 KPDVILYNNIIAAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIINGFAKSGDMRRSLE 611

Query: 592 WYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
            ++ M + G  P V T N+L++  +   Q+  A  +L  M   G+  +  TYT ++
Sbjct: 612 VFDMMRRCGCVPTVHTFNALINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIM 667



 Score =  118 bits (296), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 77/288 (26%), Positives = 133/288 (46%), Gaps = 5/288 (1%)

Query: 350 LRRQAGFKHDEHTYTTMVGILGRARQFGAINK---LLDQMVRDGCQPNVVTYNRLIHSYG 406
           ++     +H   T T M  I G A+  G + +   + D M R GC P V T+N LI+   
Sbjct: 578 VKEMQKLRHRPTTRTFMPIINGFAKS-GDMRRSLEVFDMMRRCGCVPTVHTFNALINGLV 636

Query: 407 RANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTF 466
               + +A+++  +M + G   +  TY  ++  +A  G    A + + ++Q  GL  D F
Sbjct: 637 EKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLEVDIF 696

Query: 467 TYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDM 526
           TY  ++    K+G +Q+A  +  EM  +    N   YNI+I   A+  +   A  L + M
Sbjct: 697 TYEALLKACCKSGRMQSALAVTKEMSARNIPRNSFVYNILIDGWARRGDVWEAADLIQQM 756

Query: 527 QNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNV 586
           +  G +PD  TY+  +      G ++ A     EM      P+   Y  L+  W +A   
Sbjct: 757 KKEGVKPDIHTYTSFISACSKAGDMNRATQTIEEMEALGVKPNIKTYTTLIKGWARASLP 816

Query: 587 RKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNL 634
            KA   YE M   GL+P+    + LL++ L    +++AY +  G++ +
Sbjct: 817 EKALSCYEEMKAVGLKPDKAVYHCLLTSLLSRASIAEAY-IYSGVMTI 863



 Score =  115 bits (289), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 75/287 (26%), Positives = 132/287 (45%), Gaps = 1/287 (0%)

Query: 382 LLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHA 441
           L+ +M  +G    +  Y+ ++  Y       + L VFK+++  G  P  VTY  LI+++ 
Sbjct: 437 LVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLIVFKRLKECGFTPTVVTYGCLINLYT 496

Query: 442 KAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLV 501
           K G +  A+++ + M+  G+  +  TYS++IN   K      A  +F +MV +G  P+++
Sbjct: 497 KVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGMKPDVI 556

Query: 502 TYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEM 561
            YN +IA      N   A++  ++MQ     P   T+  ++      G +  +  VF  M
Sbjct: 557 LYNNIIAAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIINGFAKSGDMRRSLEVFDMM 616

Query: 562 RRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQL 621
           RR   VP    +  L++   +   + KA E  + M  AG+  N  T   ++  +  VG  
Sbjct: 617 RRCGCVPTVHTFNALINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGYASVGDT 676

Query: 622 SDAYHLLQGMLNLGLKPSLQTYTLLL-SCCTEARSPYDMGFCHELMA 667
             A+     + N GL+  + TY  LL +CC   R    +    E+ A
Sbjct: 677 GKAFEYFTRLQNEGLEVDIFTYEALLKACCKSGRMQSALAVTKEMSA 723



 Score =  114 bits (284), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 66/259 (25%), Positives = 127/259 (49%), Gaps = 4/259 (1%)

Query: 392 QPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMD 451
           +P+   +  ++  YGR   ++ A + F++M+  G  P    Y +LI  +A    ++ A+ 
Sbjct: 307 KPSRTEFGLMVKFYGRRGDMHRARETFERMRARGITPTSRIYTSLIHAYAVGRDMEEALS 366

Query: 452 MYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQA 511
             +KM+  G+     TYSVI+    KAG+ +AA   F E        N   Y  +I    
Sbjct: 367 CVRKMKEEGIEMSLVTYSVIVGGFSKAGNAEAADHWFDEAKRIHKTLNASIYGKIIYAHC 426

Query: 512 KARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEA--VFAEMRRKNWVPD 569
           +  N + A  L R+M+  G +     Y  +M+  G+    DE +   VF  ++   + P 
Sbjct: 427 QTCNMERAEALVREMEEEGIDAPIAIYHTMMD--GYTMVADEKKGLIVFKRLKECGFTPT 484

Query: 570 EPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQ 629
              YG L++L+ K G + KA E    M + G++ N+ T + +++ F+++   ++A+ + +
Sbjct: 485 VVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFE 544

Query: 630 GMLNLGLKPSLQTYTLLLS 648
            M+  G+KP +  Y  +++
Sbjct: 545 DMVKEGMKPDVILYNNIIA 563



 Score = 99.4 bits (246), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 63/286 (22%), Positives = 132/286 (46%)

Query: 363 YTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQ 422
           +  MV   GR        +  ++M   G  P    Y  LIH+Y     + EAL   ++M+
Sbjct: 313 FGLMVKFYGRRGDMHRARETFERMRARGITPTSRIYTSLIHAYAVGRDMEEALSCVRKMK 372

Query: 423 VVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQ 482
             G E   VTY  ++   +KAG  + A   + + +    + +   Y  II    +  +++
Sbjct: 373 EEGIEMSLVTYSVIVGGFSKAGNAEAADHWFDEAKRIHKTLNASIYGKIIYAHCQTCNME 432

Query: 483 AAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVM 542
            A  L  EM  +G    +  Y+ M+       + +  L +++ ++  GF P  VTY  ++
Sbjct: 433 RAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLIVFKRLKECGFTPTVVTYGCLI 492

Query: 543 EVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLR 602
            +    G + +A  V   M+ +    +   Y ++++ + K  +   A+  +E M++ G++
Sbjct: 493 NLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGMK 552

Query: 603 PNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
           P+V   N++++AF  +G +  A   ++ M  L  +P+ +T+  +++
Sbjct: 553 PDVILYNNIIAAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIN 598


>gi|125557843|gb|EAZ03379.1| hypothetical protein OsI_25524 [Oryza sativa Indica Group]
          Length = 716

 Score =  155 bits (393), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 117/444 (26%), Positives = 199/444 (44%), Gaps = 49/444 (11%)

Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLI 402
           AL  F  +++ A  + +  TY  ++ +L    +     ++LD+M      PN++T N ++
Sbjct: 239 ALSLFEVMKKDA--EPNSSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMV 296

Query: 403 HSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLS 462
               +A  L EA  +F+     GC PD VTYC+LID   K G +D A  +++KM  AG +
Sbjct: 297 DRLCKARKLEEAYKIFESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHN 356

Query: 463 PDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKL 522
            +   Y+ +I      G  +  H++F E++ +GC P+L   N  +    KA   +    +
Sbjct: 357 ANPVVYTSLIRNFFIHGRKEDGHKVFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMI 416

Query: 523 YRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGK 582
           + D+++ GF PD  +YSI++  L   G   E   +F  M+++ +  D   Y  +VD + K
Sbjct: 417 FEDIRSYGFLPDVRSYSILIHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCK 476

Query: 583 AGNVRKAWEWYEAMLQAGLRPNVPT----------------------------------- 607
           +G V KA+E  E M +  ++P V T                                   
Sbjct: 477 SGKVHKAYEILEEMKEKCVQPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVL 536

Query: 608 CNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGFCHELMA 667
            +SL+  F +VG++ +AY +L+ M+  GL P++ T+  LL    +A    +   C + M 
Sbjct: 537 YSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMK 596

Query: 668 VSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRESKRGLVDAVVDF------LH 721
               P + +  S+   G       +    F + M       K+GLV  VV +      L 
Sbjct: 597 EMKCPPNTYTYSILINGLCRVQKYNKAFVFWQDMQ------KQGLVPNVVTYTTMISGLA 650

Query: 722 KSGLKEEAGSVWEVAAQKNVYPDA 745
           K G   +A S++E        PDA
Sbjct: 651 KVGNITDAYSLFERFKANGGIPDA 674



 Score =  145 bits (367), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 90/313 (28%), Positives = 155/313 (49%), Gaps = 5/313 (1%)

Query: 335 KQLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPN 394
           ++L D  +A+     L+ +  F      YT ++G L  AR+     +LL QM   G +  
Sbjct: 24  RRLDDAVLAVAVMRRLKFRPAFS----AYTVLIGALAEARRPERALELLRQMQEVGYEVG 79

Query: 395 VVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYK 454
           V  +  L+ +  R   + +AL +  +++    EPD V Y   ID   KAG +D+A   + 
Sbjct: 80  VHLFTTLVRALAREGQVADALALVDEVKGSCLEPDIVLYNVCIDCFGKAGNVDMACKFFH 139

Query: 455 KMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKAR 514
           +++A GL PD  +Y+ +I  L KAG L  A +LF +M  +  +P    YN MI     A 
Sbjct: 140 ELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIMGYGSAG 199

Query: 515 NYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYG 574
            ++ A KL   ++  G  P  V+++ ++  LG    +DEA ++F E+ +K+  P+   Y 
Sbjct: 200 RFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLF-EVMKKDAEPNSSTYN 258

Query: 575 LLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNL 634
           +++D+    G V +A+   + M  A L PN+ T N ++    +  +L +AY + +     
Sbjct: 259 IIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESASQR 318

Query: 635 GLKPSLQTYTLLL 647
           G  P   TY  L+
Sbjct: 319 GCNPDCVTYCSLI 331



 Score =  145 bits (367), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 100/405 (24%), Positives = 190/405 (46%), Gaps = 2/405 (0%)

Query: 342 VALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRL 401
           +A  FF+ L+ Q G K D+ +YT+M+ +L +A + G   +L  QM  +   P    YN +
Sbjct: 133 MACKFFHELKAQ-GLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTM 191

Query: 402 IHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGL 461
           I  YG A    +A  + ++++  GC P  V++ +++    K   +D A+ +++ M+    
Sbjct: 192 IMGYGSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLFEVMKKDA- 250

Query: 462 SPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALK 521
            P++ TY++II+ L   G ++ A+++  EM +    PNL+T NIM+    KAR  + A K
Sbjct: 251 EPNSSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYK 310

Query: 522 LYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWG 581
           ++      G  PD VTY  +++ LG  G +DEA  +F +M       +  VY  L+  + 
Sbjct: 311 IFESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFF 370

Query: 582 KAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQ 641
             G      + ++ +++ G +P++   N+ +    + G++     + + + + G  P ++
Sbjct: 371 IHGRKEDGHKVFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVR 430

Query: 642 TYTLLLSCCTEARSPYDMGFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMM 701
           +Y++L+   T+A    +       M   G        +    G             LE M
Sbjct: 431 SYSILIHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEM 490

Query: 702 HSEDRESKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAV 746
             +  +       A+VD L K    +EA  ++E A  K +  + V
Sbjct: 491 KEKCVQPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVV 535



 Score =  119 bits (297), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 65/240 (27%), Positives = 120/240 (50%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           +Q GF  D   Y  +V    ++ +     ++L++M     QP V TY  ++    + + L
Sbjct: 456 KQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGAIVDGLAKIDRL 515

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
           +EA  +F++ +  G E + V Y +LID   K G +D A  + ++M   GL+P+ +T++ +
Sbjct: 516 DEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSL 575

Query: 472 INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF 531
           ++ L KA  +  A   F  M    C PN  TY+I+I    + + Y  A   ++DMQ  G 
Sbjct: 576 LDALVKAEEINEALVCFQSMKEMKCPPNTYTYSILINGLCRVQKYNKAFVFWQDMQKQGL 635

Query: 532 EPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWE 591
            P+ VTY+ ++  L   G + +A ++F   +    +PD   +  L++    A    +A++
Sbjct: 636 VPNVVTYTTMISGLAKVGNITDAYSLFERFKANGGIPDAASFNALIEGMSNANRAMEAYQ 695



 Score =  112 bits (281), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 65/275 (23%), Positives = 134/275 (48%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           R  GF  D  +Y+ ++  L +A Q    + +   M + G   +   YN ++  + ++  +
Sbjct: 421 RSYGFLPDVRSYSILIHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKV 480

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
           ++A ++ ++M+    +P   TY  ++D  AK   LD A  ++++ ++ G+  +   YS +
Sbjct: 481 HKAYEILEEMKEKCVQPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSL 540

Query: 472 INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF 531
           I+  GK G +  A+ +  EM+ +G  PN+ T+N ++    KA     AL  ++ M+    
Sbjct: 541 IDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKEMKC 600

Query: 532 EPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWE 591
            P+  TYSI++  L      ++A   + +M+++  VP+   Y  ++    K GN+  A+ 
Sbjct: 601 PPNTYTYSILINGLCRVQKYNKAFVFWQDMQKQGLVPNVVTYTTMISGLAKVGNITDAYS 660

Query: 592 WYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYH 626
            +E     G  P+  + N+L+       +  +AY 
Sbjct: 661 LFERFKANGGIPDAASFNALIEGMSNANRAMEAYQ 695



 Score =  110 bits (274), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 76/303 (25%), Positives = 140/303 (46%), Gaps = 2/303 (0%)

Query: 346 FFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSY 405
           F   +RR  G K D     T +  + +A +      + + +   G  P+V +Y+ LIH  
Sbjct: 382 FKELIRR--GCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGL 439

Query: 406 GRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDT 465
            +A    E  ++F  M+  G   D   Y  ++D   K+G +  A ++ ++M+   + P  
Sbjct: 440 TKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTV 499

Query: 466 FTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRD 525
            TY  I++ L K   L  A+ LF E  ++G   N+V Y+ +I    K      A  +  +
Sbjct: 500 ATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEE 559

Query: 526 MQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGN 585
           M   G  P+  T++ +++ L     ++EA   F  M+     P+   Y +L++   +   
Sbjct: 560 MMKKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKEMKCPPNTYTYSILINGLCRVQK 619

Query: 586 VRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTL 645
             KA+ +++ M + GL PNV T  +++S   +VG ++DAY L +     G  P   ++  
Sbjct: 620 YNKAFVFWQDMQKQGLVPNVVTYTTMISGLAKVGNITDAYSLFERFKANGGIPDAASFNA 679

Query: 646 LLS 648
           L+ 
Sbjct: 680 LIE 682



 Score =  105 bits (262), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 84/342 (24%), Positives = 156/342 (45%), Gaps = 40/342 (11%)

Query: 407 RANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTF 466
           RA  L++A+     M+ +   P    Y  LI   A+A   + A+++ ++MQ  G      
Sbjct: 22  RARRLDDAVLAVAVMRRLKFRPAFSAYTVLIGALAEARRPERALELLRQMQEVGYEVGVH 81

Query: 467 TYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDM 526
            ++ ++  L + G +  A  L  E+      P++V YN+ I    KA N   A K + ++
Sbjct: 82  LFTTLVRALAREGQVADALALVDEVKGSCLEPDIVLYNVCIDCFGKAGNVDMACKFFHEL 141

Query: 527 QNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNV 586
           +  G +PD V+Y+ ++ VL   G L EAE +FA+M  +  VP    Y  ++  +G AG  
Sbjct: 142 KAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIMGYGSAGRF 201

Query: 587 RKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLL 646
             A++  E + + G  P+V + NS+L+   +  ++ +A  L + ++    +P+  TY ++
Sbjct: 202 EDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLFE-VMKKDAEPNSSTYNII 260

Query: 647 LSCCTEARSPYDMGFCHELMAVSG--HPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSE 704
           +                +++ + G    A+  L  M           +H   F  ++   
Sbjct: 261 I----------------DMLCLGGRVEEAYRILDEM-----------EHASLFPNLLT-- 291

Query: 705 DRESKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAV 746
                   V+ +VD L K+   EEA  ++E A+Q+   PD V
Sbjct: 292 --------VNIMVDRLCKARKLEEAYKIFESASQRGCNPDCV 325


>gi|296081889|emb|CBI20894.3| unnamed protein product [Vitis vinifera]
          Length = 608

 Score =  155 bits (393), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 101/374 (27%), Positives = 177/374 (47%), Gaps = 8/374 (2%)

Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRD-GCQPNVVTYNRL 401
           A+ +F W  +++G K    T+ T++   G A +     KLL+ M +D   +PN+ TYN L
Sbjct: 161 AMKYF-WKMKESGSKPTTSTFNTLIKGYGIAGEPEESQKLLELMSQDENVRPNLRTYNVL 219

Query: 402 IHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGL 461
           + ++     + +A +V  +M   G +PD VTY T+   +A+ G    A  +  +MQ + +
Sbjct: 220 VRAWCNKKNIMKAWNVVYKMVASGLQPDAVTYNTIATAYAQNGEASQAEGIILEMQNSNV 279

Query: 462 SPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALK 521
            P+  T  +II    K G ++ A Q    M + G  PNLV +N +I     A +     +
Sbjct: 280 QPNERTCCIIIGGYCKEGKIKEALQFVYRMKDLGLQPNLVVFNSLIKGFIDAVDRDGVNE 339

Query: 522 LYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWG 581
           +   M+  G +PD +T+S +M      G++D+   +F +M +    PD  VY +L   + 
Sbjct: 340 VLTLMEEFGVKPDVITFSTIMNAWSAAGFMDKCREIFDDMVKARIQPDAHVYSILAKGYV 399

Query: 582 KAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQ 641
           +AG   KA E   AM+++G  PNV    ++++ +   G++  A  + + M   G+ P+L+
Sbjct: 400 RAGEPEKAEEILNAMIKSGFHPNVVIFTTIINGWCSAGRMEYAIKIFEKMCECGIAPNLK 459

Query: 642 TYTLLLSCCTEARSPYDMGFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFL--- 698
           T+  L+    EAR P+      ++M           L + +       ++      L   
Sbjct: 460 TFETLIWGYGEARQPWKSEEVLQIMEEFNVQPEKTTLLLVAEAWRATGLKKEANRILSAV 519

Query: 699 ---EMMHSEDRESK 709
              EM H  DRE K
Sbjct: 520 KNEEMTHETDREDK 533



 Score =  132 bits (333), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 74/292 (25%), Positives = 147/292 (50%), Gaps = 3/292 (1%)

Query: 364 TTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQV 423
           T ++ I+    +   +  +LD ++  G +P++VTY  L+ +     + +    +  Q++ 
Sbjct: 76  TKLMNIMIEKGRPQEVQSILDSIIEGGHKPSLVTYTTLLAALTIQKHFDSIHSIISQVEE 135

Query: 424 VGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQA 483
            G EPD + +  +I+  +++G +  AM  + KM+ +G  P T T++ +I   G AG  + 
Sbjct: 136 NGMEPDSIFFNAVINAFSESGNMQEAMKYFWKMKESGSKPTTSTFNTLIKGYGIAGEPEE 195

Query: 484 AHQLFCEMVNQ--GCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIV 541
           + +L  E+++Q     PNL TYN+++      +N   A  +   M  +G +PD VTY+ +
Sbjct: 196 SQKLL-ELMSQDENVRPNLRTYNVLVRAWCNKKNIMKAWNVVYKMVASGLQPDAVTYNTI 254

Query: 542 MEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGL 601
                  G   +AE +  EM+  N  P+E    +++  + K G +++A ++   M   GL
Sbjct: 255 ATAYAQNGEASQAEGIILEMQNSNVQPNERTCCIIIGGYCKEGKIKEALQFVYRMKDLGL 314

Query: 602 RPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEA 653
           +PN+   NSL+  F+          +L  M   G+KP + T++ +++  + A
Sbjct: 315 QPNLVVFNSLIKGFIDAVDRDGVNEVLTLMEEFGVKPDVITFSTIMNAWSAA 366


>gi|302770783|ref|XP_002968810.1| hypothetical protein SELMODRAFT_91015 [Selaginella moellendorffii]
 gi|300163315|gb|EFJ29926.1| hypothetical protein SELMODRAFT_91015 [Selaginella moellendorffii]
          Length = 545

 Score =  155 bits (393), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 119/419 (28%), Positives = 196/419 (46%), Gaps = 12/419 (2%)

Query: 359 DEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVF 418
           D   +T ++  L R ++      +L++ VR GC+P+ VTYN  I    +A  +++A  + 
Sbjct: 6   DMVAFTVVINGLCREKRLDEAFSVLERAVRAGCEPDYVTYNVFIDGLCKAERVDDAFQLL 65

Query: 419 KQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKA 478
           K+M    C P  VTY  L+D   KAG LD AM + ++M   G SP   TY+V+I+ L KA
Sbjct: 66  KKMDEKKCLPTTVTYTALVDGLLKAGRLDEAMAVLEQMVEKGNSPTLKTYTVVIDGLSKA 125

Query: 479 GHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDM----QNAGFEPD 534
           G ++ A ++F +M+  GC P+   Y  +I    K+   + A  LY++      +A   PD
Sbjct: 126 GRVEEARRIFVDMLGNGCRPDAFVYTALIKGLCKSGKPEEAYALYKEANARKHHATAVPD 185

Query: 535 KVTYSIVMEVLGHCGYLDEAEAVF-AEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWY 593
            VTY+ +++ L   G + EA  VF  E   + ++PD   Y  ++D   K G V +  E +
Sbjct: 186 VVTYTSLIDGLCKAGRILEARQVFDDEAVERGFIPDAVTYTSIIDGLCKLGRVEEGCERF 245

Query: 594 EAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEA 653
             M   G  P+  T  +L+  F++   +  A+ + + ML  G   S  TY ++L    +A
Sbjct: 246 HEMRNRGYEPDAVTYAALIDGFMKAKMIPKAHRVYRQMLQSGTVVSTVTYNIILDGLCKA 305

Query: 654 RSPYDMGFCHELMAVSGHPAHMFLLSMPSPGPDGQ-NVRDHVGSFLEMMHSEDRESKRGL 712
               +       M   G  A +   S    G   + NV   V  F  M+   DR  +  L
Sbjct: 306 GRVAEAYATFLAMEERGCVATVVTYSALMDGFCSEGNVSAAVELFRRML---DRGCEPNL 362

Query: 713 V--DAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAVKEKGMSYWLIN-LHVMSDGTAVI 768
           V  + ++  L ++G   +A   +E   Q+ + PD        + L   L  +SDG  + 
Sbjct: 363 VSYNIIIRGLCRAGKLAKAYFYFEKLLQRRLCPDVYTFNAFLHGLCQRLDTVSDGVELF 421



 Score =  145 bits (366), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 101/325 (31%), Positives = 157/325 (48%), Gaps = 18/325 (5%)

Query: 347 FNWLRR--QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHS 404
           F+ L R  +AG + D  TY   +  L +A +     +LL +M    C P  VTY  L+  
Sbjct: 27  FSVLERAVRAGCEPDYVTYNVFIDGLCKAERVDDAFQLLKKMDEKKCLPTTVTYTALVDG 86

Query: 405 YGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPD 464
             +A  L+EA+ V +QM   G  P   TY  +ID  +KAG ++ A  ++  M   G  PD
Sbjct: 87  LLKAGRLDEAMAVLEQMVEKGNSPTLKTYTVVIDGLSKAGRVEEARRIFVDMLGNGCRPD 146

Query: 465 TFTYSVIINCLGKAGHLQAAHQLFCEMVNQG----CIPNLVTYNIMIALQAKARNYQSAL 520
            F Y+ +I  L K+G  + A+ L+ E   +      +P++VTY  +I    KA     A 
Sbjct: 147 AFVYTALIKGLCKSGKPEEAYALYKEANARKHHATAVPDVVTYTSLIDGLCKAGRILEAR 206

Query: 521 KLYRDMQ-NAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDL 579
           +++ D     GF PD VTY+ +++ L   G ++E    F EMR + + PD   Y  L+D 
Sbjct: 207 QVFDDEAVERGFIPDAVTYTSIIDGLCKLGRVEEGCERFHEMRNRGYEPDAVTYAALIDG 266

Query: 580 WGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPS 639
           + KA  + KA   Y  MLQ+G   +  T N +L    + G++++AY     M   G   +
Sbjct: 267 FMKAKMIPKAHRVYRQMLQSGTVVSTVTYNIILDGLCKAGRVAEAYATFLAMEERGCVAT 326

Query: 640 LQTYTLLLSCCTEARSPYDMGFCHE 664
           + TY+ L+            GFC E
Sbjct: 327 VVTYSALMD-----------GFCSE 340



 Score =  140 bits (352), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 86/291 (29%), Positives = 147/291 (50%), Gaps = 2/291 (0%)

Query: 359 DEHTYTTMV-GILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDV 417
           D  TYT+++ G+    R   A     D+ V  G  P+ VTY  +I    +   + E  + 
Sbjct: 185 DVVTYTSLIDGLCKAGRILEARQVFDDEAVERGFIPDAVTYTSIIDGLCKLGRVEEGCER 244

Query: 418 FKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGK 477
           F +M+  G EPD VTY  LID   KA  +  A  +Y++M  +G    T TY++I++ L K
Sbjct: 245 FHEMRNRGYEPDAVTYAALIDGFMKAKMIPKAHRVYRQMLQSGTVVSTVTYNIILDGLCK 304

Query: 478 AGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVT 537
           AG +  A+  F  M  +GC+  +VTY+ ++       N  +A++L+R M + G EP+ V+
Sbjct: 305 AGRVAEAYATFLAMEERGCVATVVTYSALMDGFCSEGNVSAAVELFRRMLDRGCEPNLVS 364

Query: 538 YSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVY-GLLVDLWGKAGNVRKAWEWYEAM 596
           Y+I++  L   G L +A   F ++ ++   PD   +   L  L  +   V    E +E+M
Sbjct: 365 YNIIIRGLCRAGKLAKAYFYFEKLLQRRLCPDVYTFNAFLHGLCQRLDTVSDGVELFESM 424

Query: 597 LQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
           +  G  PN+ + + L+    R G L  A  + + M++ G+ P +  +  L+
Sbjct: 425 VSQGTSPNLHSYSILMDGICRAGGLEVALEIFREMVSRGVAPDVVVFNTLI 475



 Score =  133 bits (334), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 81/262 (30%), Positives = 131/262 (50%), Gaps = 5/262 (1%)

Query: 391 CQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAM 450
           C P++V +  +I+   R   L+EA  V ++    GCEPD VTY   ID   KA  +D A 
Sbjct: 3   CSPDMVAFTVVINGLCREKRLDEAFSVLERAVRAGCEPDYVTYNVFIDGLCKAERVDDAF 62

Query: 451 DMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQ 510
            + KKM      P T TY+ +++ L KAG L  A  +  +MV +G  P L TY ++I   
Sbjct: 63  QLLKKMDEKKCLPTTVTYTALVDGLLKAGRLDEAMAVLEQMVEKGNSPTLKTYTVVIDGL 122

Query: 511 AKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRK----NW 566
           +KA   + A +++ DM   G  PD   Y+ +++ L   G  +EA A++ E   +      
Sbjct: 123 SKAGRVEEARRIFVDMLGNGCRPDAFVYTALIKGLCKSGKPEEAYALYKEANARKHHATA 182

Query: 567 VPDEPVYGLLVDLWGKAGNVRKAWEWY-EAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAY 625
           VPD   Y  L+D   KAG + +A + + +  ++ G  P+  T  S++    ++G++ +  
Sbjct: 183 VPDVVTYTSLIDGLCKAGRILEARQVFDDEAVERGFIPDAVTYTSIIDGLCKLGRVEEGC 242

Query: 626 HLLQGMLNLGLKPSLQTYTLLL 647
                M N G +P   TY  L+
Sbjct: 243 ERFHEMRNRGYEPDAVTYAALI 264



 Score =  112 bits (280), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 77/285 (27%), Positives = 141/285 (49%), Gaps = 7/285 (2%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           R  G++ D  TY  ++    +A+     +++  QM++ G   + VTYN ++    +A  +
Sbjct: 249 RNRGYEPDAVTYAALIDGFMKAKMIPKAHRVYRQMLQSGTVVSTVTYNIILDGLCKAGRV 308

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
            EA   F  M+  GC    VTY  L+D     G +  A++++++M   G  P+  +Y++I
Sbjct: 309 AEAYATFLAMEERGCVATVVTYSALMDGFCSEGNVSAAVELFRRMLDRGCEPNLVSYNII 368

Query: 472 INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMI-ALQAKARNYQSALKLYRDMQNAG 530
           I  L +AG L  A+  F +++ +   P++ T+N  +  L  +       ++L+  M + G
Sbjct: 369 IRGLCRAGKLAKAYFYFEKLLQRRLCPDVYTFNAFLHGLCQRLDTVSDGVELFESMVSQG 428

Query: 531 FEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAW 590
             P+  +YSI+M+ +   G L+ A  +F EM  +   PD  V+  L+     AG V +A 
Sbjct: 429 TSPNLHSYSILMDGICRAGGLEVALEIFREMVSRGVAPDVVVFNTLIRWLCIAGRVDEAL 488

Query: 591 EWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDA----YHL-LQG 630
           E +   L+    P+  +  SLL    R  ++ +A    +H+ LQG
Sbjct: 489 EVFRE-LERRSAPDAWSYWSLLDGLSRCERMEEARLLSFHMKLQG 532



 Score = 91.7 bits (226), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 57/210 (27%), Positives = 109/210 (51%), Gaps = 6/210 (2%)

Query: 362 TYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQM 421
           TY+ ++          A  +L  +M+  GC+PN+V+YN +I    RA  L +A   F+++
Sbjct: 329 TYSALMDGFCSEGNVSAAVELFRRMLDRGCEPNLVSYNIIIRGLCRAGKLAKAYFYFEKL 388

Query: 422 QVVGCEPDRVTYCTLIDIHAKAGFLDVAMD---MYKKMQAAGLSPDTFTYSVIINCLGKA 478
                 PD  T+   +  H     LD   D   +++ M + G SP+  +YS++++ + +A
Sbjct: 389 LQRRLCPDVYTFNAFL--HGLCQRLDTVSDGVELFESMVSQGTSPNLHSYSILMDGICRA 446

Query: 479 GHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTY 538
           G L+ A ++F EMV++G  P++V +N +I     A     AL+++R+++     PD  +Y
Sbjct: 447 GGLEVALEIFREMVSRGVAPDVVVFNTLIRWLCIAGRVDEALEVFRELERRS-APDAWSY 505

Query: 539 SIVMEVLGHCGYLDEAEAVFAEMRRKNWVP 568
             +++ L  C  ++EA  +   M+ +   P
Sbjct: 506 WSLLDGLSRCERMEEARLLSFHMKLQGCAP 535



 Score = 76.6 bits (187), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 67/259 (25%), Positives = 108/259 (41%), Gaps = 11/259 (4%)

Query: 496 CIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAE 555
           C P++V + ++I    + +    A  +      AG EPD VTY++ ++ L     +D+A 
Sbjct: 3   CSPDMVAFTVVINGLCREKRLDEAFSVLERAVRAGCEPDYVTYNVFIDGLCKAERVDDAF 62

Query: 556 AVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAF 615
            +  +M  K  +P    Y  LVD   KAG + +A    E M++ G  P + T   ++   
Sbjct: 63  QLLKKMDEKKCLPTTVTYTALVDGLLKAGRLDEAMAVLEQMVEKGNSPTLKTYTVVIDGL 122

Query: 616 LRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS-CCTEARSPYDMGFCHELMAVSGHPAH 674
            + G++ +A  +   ML  G +P    YT L+   C   +         E  A   H   
Sbjct: 123 SKAGRVEEARRIFVDMLGNGCRPDAFVYTALIKGLCKSGKPEEAYALYKEANARKHHATA 182

Query: 675 MFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRES-KRGLV-DAV-----VDFLHKSGLKE 727
           +  +   +   DG       G  LE     D E+ +RG + DAV     +D L K G  E
Sbjct: 183 VPDVVTYTSLIDGLC---KAGRILEARQVFDDEAVERGFIPDAVTYTSIIDGLCKLGRVE 239

Query: 728 EAGSVWEVAAQKNVYPDAV 746
           E    +     +   PDAV
Sbjct: 240 EGCERFHEMRNRGYEPDAV 258


>gi|224100421|ref|XP_002311869.1| predicted protein [Populus trichocarpa]
 gi|222851689|gb|EEE89236.1| predicted protein [Populus trichocarpa]
          Length = 470

 Score =  155 bits (393), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 93/316 (29%), Positives = 158/316 (50%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           G   D   YTT++    +     A  KL D+M +    P+ + Y  +I    R   + EA
Sbjct: 75  GIVPDTVVYTTLIDGFCKLGNIQAAYKLFDEMEKQRIVPDFIAYTAVICGLCRCGKMMEA 134

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
             VF +M   G EPD VTY TLID + K+G ++ A  ++ +M  +GL+P+  TY+ + + 
Sbjct: 135 DKVFNKMFSRGVEPDEVTYTTLIDGYCKSGEMEKAFSLHNQMVQSGLTPNVVTYTALADG 194

Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPD 534
           L K G +  A++L  EM  +G   N+ TYN ++    K+ N + A+KL  +M+ AG  PD
Sbjct: 195 LCKLGQVDTANELLHEMCGKGLQLNICTYNSLVNGLCKSGNIRQAVKLMEEMEVAGMYPD 254

Query: 535 KVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYE 594
            +T++ +M+     G + +A  +  EM  +   P    + +L++ +  +G +        
Sbjct: 255 TITFTTLMDAYCKTGEMVKAHELLREMLDRGLQPTVITFNVLMNGFCMSGMLEDGERLLA 314

Query: 595 AMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEAR 654
            ML+ G+ PN  T NSL+  +     +     + +GM   G+ P   TY +L+    +AR
Sbjct: 315 WMLEKGIMPNTTTYNSLMKQYCIRNNMRCTTEIYKGMCARGVMPDSNTYNILIKGHCKAR 374

Query: 655 SPYDMGFCHELMAVSG 670
           +  +  F H+ MA  G
Sbjct: 375 NMKEAWFLHKEMAEKG 390



 Score =  152 bits (384), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 92/313 (29%), Positives = 161/313 (51%), Gaps = 11/313 (3%)

Query: 359 DEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVF 418
           D  +Y+T++       +   + KL+ +M   G +PN+ TYN +I    ++  +++A  V 
Sbjct: 9   DVVSYSTVINGYCLGGELQKVLKLIQEMQMKGLKPNLYTYNSIILLLCKSGKVDDAERVL 68

Query: 419 KQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKA 478
           ++M   G  PD V Y TLID   K G +  A  ++ +M+   + PD   Y+ +I  L + 
Sbjct: 69  REMINQGIVPDTVVYTTLIDGFCKLGNIQAAYKLFDEMEKQRIVPDFIAYTAVICGLCRC 128

Query: 479 GHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTY 538
           G +  A ++F +M ++G  P+ VTY  +I    K+   + A  L+  M  +G  P+ VTY
Sbjct: 129 GKMMEADKVFNKMFSRGVEPDEVTYTTLIDGYCKSGEMEKAFSLHNQMVQSGLTPNVVTY 188

Query: 539 SIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQ 598
           + + + L   G +D A  +  EM  K    +   Y  LV+   K+GN+R+A +  E M  
Sbjct: 189 TALADGLCKLGQVDTANELLHEMCGKGLQLNICTYNSLVNGLCKSGNIRQAVKLMEEMEV 248

Query: 599 AGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYD 658
           AG+ P+  T  +L+ A+ + G++  A+ LL+ ML+ GL+P++ T+ +L++          
Sbjct: 249 AGMYPDTITFTTLMDAYCKTGEMVKAHELLREMLDRGLQPTVITFNVLMN---------- 298

Query: 659 MGFCHELMAVSGH 671
            GFC   M   G 
Sbjct: 299 -GFCMSGMLEDGE 310



 Score =  150 bits (378), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 101/333 (30%), Positives = 164/333 (49%), Gaps = 16/333 (4%)

Query: 421 MQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGH 480
           M+  G  PD V+Y T+I+ +   G L   + + ++MQ  GL P+ +TY+ II  L K+G 
Sbjct: 1   MKFRGDAPDVVSYSTVINGYCLGGELQKVLKLIQEMQMKGLKPNLYTYNSIILLLCKSGK 60

Query: 481 LQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSI 540
           +  A ++  EM+NQG +P+ V Y  +I    K  N Q+A KL+ +M+     PD + Y+ 
Sbjct: 61  VDDAERVLREMINQGIVPDTVVYTTLIDGFCKLGNIQAAYKLFDEMEKQRIVPDFIAYTA 120

Query: 541 VMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAG 600
           V+  L  CG + EA+ VF +M  +   PDE  Y  L+D + K+G + KA+  +  M+Q+G
Sbjct: 121 VICGLCRCGKMMEADKVFNKMFSRGVEPDEVTYTTLIDGYCKSGEMEKAFSLHNQMVQSG 180

Query: 601 LRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS-CCTEARSPYDM 659
           L PNV T  +L     ++GQ+  A  LL  M   GL+ ++ TY  L++  C        +
Sbjct: 181 LTPNVVTYTALADGLCKLGQVDTANELLHEMCGKGLQLNICTYNSLVNGLCKSGNIRQAV 240

Query: 660 GFCHELMAVSGHPAHM-FLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRESKRGLVDAVVD 718
               E+     +P  + F   M +    G+ V+ H     EM+        RGL   V+ 
Sbjct: 241 KLMEEMEVAGMYPDTITFTTLMDAYCKTGEMVKAH-ELLREMLD-------RGLQPTVIT 292

Query: 719 F------LHKSGLKEEAGSVWEVAAQKNVYPDA 745
           F         SG+ E+   +     +K + P+ 
Sbjct: 293 FNVLMNGFCMSGMLEDGERLLAWMLEKGIMPNT 325



 Score =  139 bits (351), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 85/296 (28%), Positives = 144/296 (48%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           +  G K + +TY +++ +L ++ +     ++L +M+  G  P+ V Y  LI  + +   +
Sbjct: 37  QMKGLKPNLYTYNSIILLLCKSGKVDDAERVLREMINQGIVPDTVVYTTLIDGFCKLGNI 96

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
             A  +F +M+     PD + Y  +I    + G +  A  ++ KM + G+ PD  TY+ +
Sbjct: 97  QAAYKLFDEMEKQRIVPDFIAYTAVICGLCRCGKMMEADKVFNKMFSRGVEPDEVTYTTL 156

Query: 472 INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF 531
           I+   K+G ++ A  L  +MV  G  PN+VTY  +     K     +A +L  +M   G 
Sbjct: 157 IDGYCKSGEMEKAFSLHNQMVQSGLTPNVVTYTALADGLCKLGQVDTANELLHEMCGKGL 216

Query: 532 EPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWE 591
           + +  TY+ ++  L   G + +A  +  EM      PD   +  L+D + K G + KA E
Sbjct: 217 QLNICTYNSLVNGLCKSGNIRQAVKLMEEMEVAGMYPDTITFTTLMDAYCKTGEMVKAHE 276

Query: 592 WYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
               ML  GL+P V T N L++ F   G L D   LL  ML  G+ P+  TY  L+
Sbjct: 277 LLREMLDRGLQPTVITFNVLMNGFCMSGMLEDGERLLAWMLEKGIMPNTTTYNSLM 332



 Score =  126 bits (316), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 82/308 (26%), Positives = 148/308 (48%), Gaps = 1/308 (0%)

Query: 336 QLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNV 395
           +L +   A   F+ + +Q     D   YT ++  L R  +    +K+ ++M   G +P+ 
Sbjct: 92  KLGNIQAAYKLFDEMEKQR-IVPDFIAYTAVICGLCRCGKMMEADKVFNKMFSRGVEPDE 150

Query: 396 VTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKK 455
           VTY  LI  Y ++  + +A  +  QM   G  P+ VTY  L D   K G +D A ++  +
Sbjct: 151 VTYTTLIDGYCKSGEMEKAFSLHNQMVQSGLTPNVVTYTALADGLCKLGQVDTANELLHE 210

Query: 456 MQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARN 515
           M   GL  +  TY+ ++N L K+G+++ A +L  EM   G  P+ +T+  ++    K   
Sbjct: 211 MCGKGLQLNICTYNSLVNGLCKSGNIRQAVKLMEEMEVAGMYPDTITFTTLMDAYCKTGE 270

Query: 516 YQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGL 575
              A +L R+M + G +P  +T++++M      G L++ E + A M  K  +P+   Y  
Sbjct: 271 MVKAHELLREMLDRGLQPTVITFNVLMNGFCMSGMLEDGERLLAWMLEKGIMPNTTTYNS 330

Query: 576 LVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLG 635
           L+  +    N+R   E Y+ M   G+ P+  T N L+    +   + +A+ L + M   G
Sbjct: 331 LMKQYCIRNNMRCTTEIYKGMCARGVMPDSNTYNILIKGHCKARNMKEAWFLHKEMAEKG 390

Query: 636 LKPSLQTY 643
              +  +Y
Sbjct: 391 FNLTASSY 398



 Score =  125 bits (314), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 77/283 (27%), Positives = 134/283 (47%), Gaps = 39/283 (13%)

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
           Q+G   +  TYT +   L +  Q    N+LL +M   G Q N+ TYN L++   ++  + 
Sbjct: 178 QSGLTPNVVTYTALADGLCKLGQVDTANELLHEMCGKGLQLNICTYNSLVNGLCKSGNIR 237

Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
           +A+ + ++M+V G  PD +T+ TL+D + K G +  A ++ ++M   GL P   T++V++
Sbjct: 238 QAVKLMEEMEVAGMYPDTITFTTLMDAYCKTGEMVKAHELLREMLDRGLQPTVITFNVLM 297

Query: 473 NCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFE 532
           N    +G L+   +L   M+ +G +PN  TYN ++       N +   ++Y+ M   G  
Sbjct: 298 NGFCMSGMLEDGERLLAWMLEKGIMPNTTTYNSLMKQYCIRNNMRCTTEIYKGMCARGVM 357

Query: 533 PDKVTYSIVMEVLGHC------------------GY-------------------LDEAE 555
           PD  TY+I+++  GHC                  G+                   + EA 
Sbjct: 358 PDSNTYNILIK--GHCKARNMKEAWFLHKEMAEKGFNLTASSYNSIIKGFFKKKKISEAR 415

Query: 556 AVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQ 598
            +F EMRR+    D  +Y L VD+    GN+  A E  +  ++
Sbjct: 416 ELFEEMRREGMAADAEIYNLFVDISYGEGNMETALELCDEAIE 458


>gi|296083846|emb|CBI24234.3| unnamed protein product [Vitis vinifera]
          Length = 589

 Score =  155 bits (393), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 127/478 (26%), Positives = 218/478 (45%), Gaps = 74/478 (15%)

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
           ++G + + +T   M+  L + ++       L  M   G  P+VVTYN LI++Y R   L 
Sbjct: 90  RSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGLLE 149

Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
           EA ++   M   G +P   TY  +I+   K G    A  +  +M   G+SPDT TY++++
Sbjct: 150 EAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILL 209

Query: 473 NCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFE 532
               +  ++  A ++F EM +QG +P+LV+++ +I L +K      ALK +RDM+NAG  
Sbjct: 210 VECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLA 269

Query: 533 PDKVTYSI--------------------------VMEVL-------GHC--GYLDEAEAV 557
           PD V Y+I                          V++V+       G C    L EA+ +
Sbjct: 270 PDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGLCKEKMLSEADEL 329

Query: 558 FAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLR 617
           F EM  +   PD   +  L++ + K GN+ KA   +E M+Q  L+P+V T N+L+  F +
Sbjct: 330 FTEMTERGVFPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCK 389

Query: 618 VGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS------CCTEARSPYD----MGF------ 661
             ++     L   M++  + P+  +Y +L++      C +EA   +D     GF      
Sbjct: 390 GSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIIT 449

Query: 662 CHELM-----AVSGHPAHMFLLSMPSPG--PDGQNVRDHVGSFLEMMHSE------DRES 708
           C+ ++     A +   A  FL +M   G  PDG      +  F++  + +      ++  
Sbjct: 450 CNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLINGFIKEENMDRAFALVNKME 509

Query: 709 KRGLVDAVVDF------LHKSGLKEEAGSVWEVAAQKNVYPDAVKEKGMSYWLINLHV 760
             GL+  V+ +        + G  +EA  +     ++ V PD    +     LIN HV
Sbjct: 510 NSGLLPDVITYNVILNGFSRQGRMQEAELIMLKMIERGVNPD----RSTYTSLINGHV 563



 Score =  149 bits (375), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 90/308 (29%), Positives = 163/308 (52%), Gaps = 5/308 (1%)

Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLI 402
           AL +F  ++  AG   D   YT ++G   R        K+ D+M+  GC  +VVTYN ++
Sbjct: 256 ALKYFRDMK-NAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYNTIL 314

Query: 403 HSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLS 462
           +   +   L+EA ++F +M   G  PD  T+ TLI+ ++K G ++ A+ +++ M    L 
Sbjct: 315 NGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQRNLK 374

Query: 463 PDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKL 522
           PD  TY+ +I+   K   ++  ++L+ +M+++   PN ++Y I+I           A +L
Sbjct: 375 PDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRL 434

Query: 523 YRDMQNAGFEPDKVTYSIVMEVLGHC--GYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLW 580
           + +M   GFE   +T + +++  G+C  G   +A+   + M  K  VPD   Y  L++ +
Sbjct: 435 WDEMVEKGFEATIITCNTIVK--GYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLINGF 492

Query: 581 GKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSL 640
            K  N+ +A+     M  +GL P+V T N +L+ F R G++ +A  ++  M+  G+ P  
Sbjct: 493 IKEENMDRAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQEAELIMLKMIERGVNPDR 552

Query: 641 QTYTLLLS 648
            TYT L++
Sbjct: 553 STYTSLIN 560



 Score =  113 bits (283), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 63/252 (25%), Positives = 122/252 (48%)

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
           + G   D +T+TT++    +         L + M++   +P+VVTYN LI  + + + + 
Sbjct: 335 ERGVFPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEME 394

Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
           +  +++  M      P+ ++Y  LI+ +   G +  A  ++ +M   G      T + I+
Sbjct: 395 KVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIV 454

Query: 473 NCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFE 532
               +AG+   A +    M+ +G +P+ +TYN +I    K  N   A  L   M+N+G  
Sbjct: 455 KGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLINGFIKEENMDRAFALVNKMENSGLL 514

Query: 533 PDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEW 592
           PD +TY++++      G + EAE +  +M  +   PD   Y  L++      N+++A+  
Sbjct: 515 PDVITYNVILNGFSRQGRMQEAELIMLKMIERGVNPDRSTYTSLINGHVTQNNLKEAFRV 574

Query: 593 YEAMLQAGLRPN 604
           ++ MLQ G  P+
Sbjct: 575 HDEMLQRGFVPD 586



 Score =  108 bits (271), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 102/463 (22%), Positives = 176/463 (38%), Gaps = 64/463 (13%)

Query: 391 CQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAM 450
           C  N + ++ L+ +Y +A  L E  + F+ ++  G         +L+    K G++D+A 
Sbjct: 23  CGSNPLVFDLLVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWVDLAW 82

Query: 451 DMYKK-----------------------------------MQAAGLSPDTFTYSVIINCL 475
           ++Y++                                   M+  G+ PD  TY+ +IN  
Sbjct: 83  EIYQEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAY 142

Query: 476 GKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDK 535
            + G L+ A +L   M  +G  P + TYN +I    K   Y  A  +  +M   G  PD 
Sbjct: 143 CRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDT 202

Query: 536 VTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEA 595
            TY+I++        + +AE +F EM  +  VPD   +  L+ L  K G + +A +++  
Sbjct: 203 ATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRD 262

Query: 596 MLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS--CCTEA 653
           M  AGL P+      L+  F R G +S+A  +   ML  G    + TY  +L+  C  + 
Sbjct: 263 MKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGLCKEKM 322

Query: 654 RSPYDMGFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRESKRGLV 713
            S  D  F    M   G     +  +    G       +   +  EMM   + +      
Sbjct: 323 LSEADELFTE--MTERGVFPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQRNLKPDVVTY 380

Query: 714 DAVVDFLHKSGLKEEAGSVWEVAAQKNVYP-------------------------DAVKE 748
           + ++D   K    E+   +W     + +YP                         D + E
Sbjct: 381 NTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVE 440

Query: 749 KGMSYWLINLHVMSDGTAVIALSRTLAWFRKQMLISGVGPSRI 791
           KG    +I  + +  G      +     F   ML+ G+ P  I
Sbjct: 441 KGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGI 483


>gi|302760809|ref|XP_002963827.1| hypothetical protein SELMODRAFT_79421 [Selaginella moellendorffii]
 gi|300169095|gb|EFJ35698.1| hypothetical protein SELMODRAFT_79421 [Selaginella moellendorffii]
          Length = 616

 Score =  155 bits (393), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 92/309 (29%), Positives = 159/309 (51%), Gaps = 5/309 (1%)

Query: 342 VALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRL 401
           +A+ FF+W   Q G+KHD H+Y  ++ IL ++       K+   ++  GC PN+VT+  L
Sbjct: 9   LAIQFFDWAGEQDGYKHDVHSYNHLLDILVKSGHHFRTGKVYKDLLHSGCSPNLVTFKIL 68

Query: 402 IHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGL 461
           I    +A     AL+  + +      PD   +  LI    K G  D A+ +++ M+++ +
Sbjct: 69  IRGNCKAGQAMRALEFLRALDEFSVAPDVYIFNVLIHGLFKDGNPDQAVKLFENMESSRV 128

Query: 462 SPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQG--CIPNLVTYNIMIALQAKARNYQSA 519
            P+  TY+ +I+ L K+G+L+ A +L  EM+ +G    P++VTYN +I    +A   + A
Sbjct: 129 KPEIVTYNTVISGLCKSGNLEKARELLEEMIRKGGKSAPDIVTYNTLINAFYRASRIREA 188

Query: 520 LKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDL 579
                 M+ AG  PD +T +I++  +   G ++EA  +   M+    VPD   Y  ++  
Sbjct: 189 CAFREKMKAAGINPDVLTCNILVSGICKDGDVEEALEILDGMKLAGPVPDVITYNSIIHA 248

Query: 580 WGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPS 639
              AG V +A E  + M      P++ T N+LL  F + G L  A  +L+ M    + P 
Sbjct: 249 LCVAGKVVEAAEILKTM---SCSPDLVTFNTLLDGFCKAGMLPRALEVLEEMCRENILPD 305

Query: 640 LQTYTLLLS 648
           + TYT+L++
Sbjct: 306 VITYTILVN 314



 Score =  136 bits (342), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 85/296 (28%), Positives = 153/296 (51%), Gaps = 3/296 (1%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           + AG   D  TY +++  L  A +     ++L  M    C P++VT+N L+  + +A  L
Sbjct: 231 KLAGPVPDVITYNSIIHALCVAGKVVEAAEILKTM---SCSPDLVTFNTLLDGFCKAGML 287

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
             AL+V ++M      PD +TY  L++   + G + VA  + +++   G  PD   Y+ +
Sbjct: 288 PRALEVLEEMCRENILPDVITYTILVNGLCRVGQVQVAFYLLEEIVRQGYIPDVIAYTSL 347

Query: 472 INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF 531
           ++ L K+G ++ AH+L  EM  +GC   +V Y+ +++   +A N   A ++  +M +   
Sbjct: 348 VDGLCKSGEIEEAHKLVKEMSVRGCRTGVVMYSSLVSGYCRAGNVHKAREILAEMVSINM 407

Query: 532 EPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWE 591
            P   TY+IV+  L   G + +A ++ +++  + +VPD   Y  L+D   KA  VR+A +
Sbjct: 408 VPPLFTYNIVLGGLIKDGSISKAVSLISDLVARGYVPDVVTYNTLIDGLCKANRVREACD 467

Query: 592 WYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
             + M   G  PN  T  S++    RVG++ DA+ L+  M      P++  YT L+
Sbjct: 468 LADEMASRGCFPNDVTLGSVVFGLCRVGRVDDAWSLVVEMSRKRHAPNVVVYTSLI 523



 Score =  126 bits (316), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 83/284 (29%), Positives = 141/284 (49%)

Query: 359 DEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVF 418
           D  TYT +V  L R  Q      LL+++VR G  P+V+ Y  L+    ++  + EA  + 
Sbjct: 305 DVITYTILVNGLCRVGQVQVAFYLLEEIVRQGYIPDVIAYTSLVDGLCKSGEIEEAHKLV 364

Query: 419 KQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKA 478
           K+M V GC    V Y +L+  + +AG +  A ++  +M +  + P  FTY++++  L K 
Sbjct: 365 KEMSVRGCRTGVVMYSSLVSGYCRAGNVHKAREILAEMVSINMVPPLFTYNIVLGGLIKD 424

Query: 479 GHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTY 538
           G +  A  L  ++V +G +P++VTYN +I    KA   + A  L  +M + G  P+ VT 
Sbjct: 425 GSISKAVSLISDLVARGYVPDVVTYNTLIDGLCKANRVREACDLADEMASRGCFPNDVTL 484

Query: 539 SIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQ 598
             V+  L   G +D+A ++  EM RK   P+  VY  L+D   K+  +  A    +AM  
Sbjct: 485 GSVVFGLCRVGRVDDAWSLVVEMSRKRHAPNVVVYTSLIDGLCKSDRMDDACMVLDAMRG 544

Query: 599 AGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQT 642
            G+  +      L+ +    G++++A  +   M+  G  P   T
Sbjct: 545 QGVALDDFAYRKLIVSMSHGGRVAEAMAMYDEMVARGFLPDGST 588



 Score =  115 bits (287), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 80/310 (25%), Positives = 144/310 (46%), Gaps = 1/310 (0%)

Query: 359 DEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVF 418
           D  T+ T++    +A       ++L++M R+   P+V+TY  L++   R   +  A  + 
Sbjct: 270 DLVTFNTLLDGFCKAGMLPRALEVLEEMCRENILPDVITYTILVNGLCRVGQVQVAFYLL 329

Query: 419 KQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKA 478
           +++   G  PD + Y +L+D   K+G ++ A  + K+M   G       YS +++   +A
Sbjct: 330 EEIVRQGYIPDVIAYTSLVDGLCKSGEIEEAHKLVKEMSVRGCRTGVVMYSSLVSGYCRA 389

Query: 479 GHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTY 538
           G++  A ++  EMV+   +P L TYNI++    K  +   A+ L  D+   G+ PD VTY
Sbjct: 390 GNVHKAREILAEMVSINMVPPLFTYNIVLGGLIKDGSISKAVSLISDLVARGYVPDVVTY 449

Query: 539 SIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQ 598
           + +++ L     + EA  +  EM  +   P++   G +V    + G V  AW     M +
Sbjct: 450 NTLIDGLCKANRVREACDLADEMASRGCFPNDVTLGSVVFGLCRVGRVDDAWSLVVEMSR 509

Query: 599 AGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTY-TLLLSCCTEARSPY 657
               PNV    SL+    +  ++ DA  +L  M   G+      Y  L++S     R   
Sbjct: 510 KRHAPNVVVYTSLIDGLCKSDRMDDACMVLDAMRGQGVALDDFAYRKLIVSMSHGGRVAE 569

Query: 658 DMGFCHELMA 667
            M    E++A
Sbjct: 570 AMAMYDEMVA 579



 Score =  107 bits (266), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 75/273 (27%), Positives = 127/273 (46%), Gaps = 1/273 (0%)

Query: 342 VALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRL 401
           VA      + RQ G+  D   YT++V  L ++ +    +KL+ +M   GC+  VV Y+ L
Sbjct: 324 VAFYLLEEIVRQ-GYIPDVIAYTSLVDGLCKSGEIEEAHKLVKEMSVRGCRTGVVMYSSL 382

Query: 402 IHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGL 461
           +  Y RA  +++A ++  +M  +   P   TY  ++    K G +  A+ +   + A G 
Sbjct: 383 VSGYCRAGNVHKAREILAEMVSINMVPPLFTYNIVLGGLIKDGSISKAVSLISDLVARGY 442

Query: 462 SPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALK 521
            PD  TY+ +I+ L KA  ++ A  L  EM ++GC PN VT   ++    +      A  
Sbjct: 443 VPDVVTYNTLIDGLCKANRVREACDLADEMASRGCFPNDVTLGSVVFGLCRVGRVDDAWS 502

Query: 522 LYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWG 581
           L  +M      P+ V Y+ +++ L     +D+A  V   MR +    D+  Y  L+    
Sbjct: 503 LVVEMSRKRHAPNVVVYTSLIDGLCKSDRMDDACMVLDAMRGQGVALDDFAYRKLIVSMS 562

Query: 582 KAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSA 614
             G V +A   Y+ M+  G  P+  T  +L  A
Sbjct: 563 HGGRVAEAMAMYDEMVARGFLPDGSTSKTLEEA 595


>gi|357130476|ref|XP_003566874.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
           mitochondrial-like [Brachypodium distachyon]
          Length = 810

 Score =  155 bits (393), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 83/297 (27%), Positives = 153/297 (51%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           +Q G   +++TY  ++  +    +   ++ +L   + +G  P ++TYN +I+ + +A  +
Sbjct: 498 KQNGVSCNDYTYNVLINGICMVDRVCEVDGMLKSFMSEGFIPTMMTYNSIINGFVKAGMM 557

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
             A  V++QM+  G  P+ +TY + ID + + G  D+A+ M   ++  GL PD   Y+ +
Sbjct: 558 GSAFTVYQQMREKGLPPNIITYTSFIDGYCRTGCSDMALKMLNDVRRRGLQPDIVAYNAL 617

Query: 472 INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF 531
           IN   + G++  A QL   ++  G  PN V YN +I         +   K Y  M   G 
Sbjct: 618 INGFCQEGNMSHALQLLVILLKDGLAPNTVVYNSLITGYKNLNMMKEVSKFYESMIKGGI 677

Query: 532 EPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWE 591
             D  TY+ +++     G +  A  +++EM  K ++PD   +  L     ++G++  A +
Sbjct: 678 VADTSTYTTLIDGFSKDGNVAFALELYSEMMAKGYIPDAFTFTALTHGLCRSGDIDGAKK 737

Query: 592 WYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
             E M +  +RPNV   N L++ +LR  +L +A+ L   MLN+G++P   TY +L+S
Sbjct: 738 LLEEMRRLDVRPNVFIYNMLINGYLRDCKLQEAFRLHDEMLNMGIQPDDTTYDILVS 794



 Score =  132 bits (333), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 77/289 (26%), Positives = 146/289 (50%)

Query: 359 DEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVF 418
           D  TY  ++    +A +      L D+M + G +P++ TYN L+  Y +   ++EA+ ++
Sbjct: 400 DVFTYNNLIHWHCQAHKLREALNLFDRMKKAGVKPSINTYNSLLMGYCKKGCMDEAVKLY 459

Query: 419 KQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKA 478
            +M + G +P+ VTY TL+  +      D A  +  +M+  G+S + +TY+V+IN +   
Sbjct: 460 SEMPMEGFKPNVVTYITLMRGYIAKKDFDNAYALLDEMKQNGVSCNDYTYNVLINGICMV 519

Query: 479 GHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTY 538
             +     +    +++G IP ++TYN +I    KA    SA  +Y+ M+  G  P+ +TY
Sbjct: 520 DRVCEVDGMLKSFMSEGFIPTMMTYNSIINGFVKAGMMGSAFTVYQQMREKGLPPNIITY 579

Query: 539 SIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQ 598
           +  ++     G  D A  +  ++RR+   PD   Y  L++ + + GN+  A +    +L+
Sbjct: 580 TSFIDGYCRTGCSDMALKMLNDVRRRGLQPDIVAYNALINGFCQEGNMSHALQLLVILLK 639

Query: 599 AGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
            GL PN    NSL++ +  +  + +     + M+  G+     TYT L+
Sbjct: 640 DGLAPNTVVYNSLITGYKNLNMMKEVSKFYESMIKGGIVADTSTYTTLI 688



 Score =  127 bits (318), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 82/294 (27%), Positives = 139/294 (47%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           GFK +  TY T++      + F     LLD+M ++G   N  TYN LI+     + + E 
Sbjct: 466 GFKPNVVTYITLMRGYIAKKDFDNAYALLDEMKQNGVSCNDYTYNVLINGICMVDRVCEV 525

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
             + K     G  P  +TY ++I+   KAG +  A  +Y++M+  GL P+  TY+  I+ 
Sbjct: 526 DGMLKSFMSEGFIPTMMTYNSIINGFVKAGMMGSAFTVYQQMREKGLPPNIITYTSFIDG 585

Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPD 534
             + G    A ++  ++  +G  P++V YN +I    +  N   AL+L   +   G  P+
Sbjct: 586 YCRTGCSDMALKMLNDVRRRGLQPDIVAYNALINGFCQEGNMSHALQLLVILLKDGLAPN 645

Query: 535 KVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYE 594
            V Y+ ++    +   + E    +  M +   V D   Y  L+D + K GNV  A E Y 
Sbjct: 646 TVVYNSLITGYKNLNMMKEVSKFYESMIKGGIVADTSTYTTLIDGFSKDGNVAFALELYS 705

Query: 595 AMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
            M+  G  P+  T  +L     R G +  A  LL+ M  L ++P++  Y +L++
Sbjct: 706 EMMAKGYIPDAFTFTALTHGLCRSGDIDGAKKLLEEMRRLDVRPNVFIYNMLIN 759



 Score =  111 bits (277), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 94/396 (23%), Positives = 172/396 (43%), Gaps = 7/396 (1%)

Query: 365 TMVGILGRA-RQFGAINK---LLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQ 420
            M G+L R   Q G   K   L  QM   G  P+    + ++          +A+ +F++
Sbjct: 333 VMYGVLIRGCDQVGMTQKAYELCRQMTGQGLLPSTFELSLVLKGLLNDRRWKDAVCLFEE 392

Query: 421 MQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGH 480
           M   G  PD  TY  LI  H +A  L  A++++ +M+ AG+ P   TY+ ++    K G 
Sbjct: 393 MADSGL-PDVFTYNNLIHWHCQAHKLREALNLFDRMKKAGVKPSINTYNSLLMGYCKKGC 451

Query: 481 LQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSI 540
           +  A +L+ EM  +G  PN+VTY  ++      +++ +A  L  +M+  G   +  TY++
Sbjct: 452 MDEAVKLYSEMPMEGFKPNVVTYITLMRGYIAKKDFDNAYALLDEMKQNGVSCNDYTYNV 511

Query: 541 VMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAG 600
           ++  +     + E + +      + ++P    Y  +++ + KAG +  A+  Y+ M + G
Sbjct: 512 LINGICMVDRVCEVDGMLKSFMSEGFIPTMMTYNSIINGFVKAGMMGSAFTVYQQMREKG 571

Query: 601 LRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS-CCTEARSPYDM 659
           L PN+ T  S +  + R G    A  +L  +   GL+P +  Y  L++  C E    + +
Sbjct: 572 LPPNIITYTSFIDGYCRTGCSDMALKMLNDVRRRGLQPDIVAYNALINGFCQEGNMSHAL 631

Query: 660 GFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRESKRGLVDAVVDF 719
                L+     P  +   S+ + G    N+   V  F E M      +       ++D 
Sbjct: 632 QLLVILLKDGLAPNTVVYNSLIT-GYKNLNMMKEVSKFYESMIKGGIVADTSTYTTLIDG 690

Query: 720 LHKSGLKEEAGSVWEVAAQKNVYPDAVKEKGMSYWL 755
             K G    A  ++     K   PDA     +++ L
Sbjct: 691 FSKDGNVAFALELYSEMMAKGYIPDAFTFTALTHGL 726



 Score =  100 bits (248), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 77/305 (25%), Positives = 140/305 (45%), Gaps = 2/305 (0%)

Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLI 402
           AL  F  +R + G++ D   +  ++    +        +L D+M      P+   Y   I
Sbjct: 176 ALALFMEMRGR-GYRVDAWMFDALMSACLKEGMHEDAVRLFDEMPGAEIDPDQRVYALAI 234

Query: 403 HSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLS 462
            +  +      AL + ++M+ VG +    TY T++D+  K G ++ A+ +  +M+ AG  
Sbjct: 235 TALCKLGDGGRALRMLREMKEVGFDTCDFTYRTMVDVLVKTGRMEEALRVNDEMRDAGKK 294

Query: 463 PDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKL 522
            D    + ++        +  A  LF E +  G +P  V Y ++I    +    Q A +L
Sbjct: 295 MDVIVATTLMRGYCLRQEVGNALNLFKETLKDGIVPTKVMYGVLIRGCDQVGMTQKAYEL 354

Query: 523 YRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGK 582
            R M   G  P     S+V++ L +     +A  +F EM   + +PD   Y  L+    +
Sbjct: 355 CRQMTGQGLLPSTFELSLVLKGLLNDRRWKDAVCLFEEM-ADSGLPDVFTYNNLIHWHCQ 413

Query: 583 AGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQT 642
           A  +R+A   ++ M +AG++P++ T NSLL  + + G + +A  L   M   G KP++ T
Sbjct: 414 AHKLREALNLFDRMKKAGVKPSINTYNSLLMGYCKKGCMDEAVKLYSEMPMEGFKPNVVT 473

Query: 643 YTLLL 647
           Y  L+
Sbjct: 474 YITLM 478



 Score = 87.0 bits (214), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 70/265 (26%), Positives = 122/265 (46%), Gaps = 5/265 (1%)

Query: 385 QMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAG 444
            MV  G  P++ +   L+    R +   +AL +F +M+  G   D   +  L+    K G
Sbjct: 147 HMVARGVVPDIKSRTDLLIRTARGSSAKDALALFMEMRGRGYRVDAWMFDALMSACLKEG 206

Query: 445 FLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYN 504
             + A+ ++ +M  A + PD   Y++ I  L K G    A ++  EM   G      TY 
Sbjct: 207 MHEDAVRLFDEMPGAEIDPDQRVYALAITALCKLGDGGRALRMLREMKEVGFDTCDFTYR 266

Query: 505 IMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEA--VFAEMR 562
            M+ +  K    + AL++  +M++AG + D +  + +M   G+C   +   A  +F E  
Sbjct: 267 TMVDVLVKTGRMEEALRVNDEMRDAGKKMDVIVATTLMR--GYCLRQEVGNALNLFKETL 324

Query: 563 RKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLS 622
           +   VP + +YG+L+    + G  +KA+E    M   GL P+    + +L   L   +  
Sbjct: 325 KDGIVPTKVMYGVLIRGCDQVGMTQKAYELCRQMTGQGLLPSTFELSLVLKGLLNDRRWK 384

Query: 623 DAYHLLQGMLNLGLKPSLQTYTLLL 647
           DA  L + M + GL P + TY  L+
Sbjct: 385 DAVCLFEEMADSGL-PDVFTYNNLI 408



 Score = 78.6 bits (192), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 69/259 (26%), Positives = 109/259 (42%)

Query: 414 ALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIIN 473
           A D +  M   G  PD  +   L+   A+      A+ ++ +M+  G   D + +  +++
Sbjct: 141 ATDTYAHMVARGVVPDIKSRTDLLIRTARGSSAKDALALFMEMRGRGYRVDAWMFDALMS 200

Query: 474 CLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEP 533
              K G  + A +LF EM      P+   Y + I    K  +   AL++ R+M+  GF+ 
Sbjct: 201 ACLKEGMHEDAVRLFDEMPGAEIDPDQRVYALAITALCKLGDGGRALRMLREMKEVGFDT 260

Query: 534 DKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWY 593
              TY  +++VL   G ++EA  V  EMR      D  V   L+  +     V  A   +
Sbjct: 261 CDFTYRTMVDVLVKTGRMEEALRVNDEMRDAGKKMDVIVATTLMRGYCLRQEVGNALNLF 320

Query: 594 EAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEA 653
           +  L+ G+ P       L+    +VG    AY L + M   GL PS    +L+L      
Sbjct: 321 KETLKDGIVPTKVMYGVLIRGCDQVGMTQKAYELCRQMTGQGLLPSTFELSLVLKGLLND 380

Query: 654 RSPYDMGFCHELMAVSGHP 672
           R   D     E MA SG P
Sbjct: 381 RRWKDAVCLFEEMADSGLP 399


>gi|363543445|ref|NP_001241732.1| salt-inducible protein [Zea mays]
 gi|195610062|gb|ACG26861.1| salt-inducible protein [Zea mays]
          Length = 716

 Score =  155 bits (393), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 120/502 (23%), Positives = 216/502 (43%), Gaps = 16/502 (3%)

Query: 354 AGFKHDEHTYTTMVGILGRARQFGAINKLLDQM-VRDGCQPNVVTYNRLIHSYGRANYLN 412
           AG   D  TY+T++    R RQF    +  ++M   DG  P+ VTY+ ++  Y +     
Sbjct: 216 AGVPLDNITYSTLITAARRCRQFAKAVEWFERMYAADGVLPDEVTYSAVLDVYAQLGMKE 275

Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
           E L +F + +  G +PD V +  L  +  +AG  D    ++K+M+  G+ P+ F Y+ ++
Sbjct: 276 EVLALFDRARGSGWKPDHVAFAVLAKMFGEAGDYDGIQFVFKEMREVGIKPNIFVYNALL 335

Query: 473 NCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFE 532
             LGK G    A  LF EM++QG  PN  T   +  +  +AR  + AL+L+  M+     
Sbjct: 336 EALGKTGKPGLARNLFEEMIDQGVEPNARTLTALAKIYGRARWGRDALQLWDKMRELKLP 395

Query: 533 PDKVTYSIVMEVLGHCGYLDEAEAVFAEMR----RKNWVPDEPVYGLLVDLWGKAGNVRK 588
            D +  + ++ +    G + EAE +F EM+    R    PD+  Y  +++++G  G+   
Sbjct: 396 ADSILCNTLLSMCADVGLVAEAEQLFNEMKDPECRDVPKPDKWSYTAMINIYGSNGDTDS 455

Query: 589 AWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
           A + +  ML+ G+ PN+ +   ++    +  ++  A  +L+  L  GLKP  +    LLS
Sbjct: 456 ALQLFAEMLKGGIEPNIMSYTIVIQCLGKAHRIQQAVEVLESGLEKGLKPDDRLCGCLLS 515

Query: 649 CCTEARSPYDMGFCHELMAVSGHPAHMFLLSMPSPGPDGQ-NVRDHVGSFLEMMHSEDRE 707
                      G   E++  S    +  L+ +     D Q    D       +++    E
Sbjct: 516 VIA-----LSSGEEMEMVLSSLEKVNQNLVKLIRVLGDAQVGGYDITKELKSVLNGAAPE 570

Query: 708 SKRGLVDAVVDFLHKSGL-KEEAGSVWEVAAQKNVYPDAVKEKGMSYWLINLHVMSDGTA 766
            +R   + ++D     G   + A  V+ +A    +Y   ++ +    W ++L  +S G A
Sbjct: 571 VRRPYCNCLIDVCRNHGFPPQRAREVFHLAQTYGLY-SKLQSRKDEEWSLDLRSLSVGAA 629

Query: 767 VIALSRTLAWFRKQMLISGVGPSRIDIVTGWGRRSRVTGTSLVRQAVQELLHMFSFPFFT 826
             A    +    ++       P    + TG        G +    A    L   + PF  
Sbjct: 630 KTAFDDWMQTVSERWAQQKDLPESFSVYTGSSTHKFAQGLA---SAFAAHLDQMAVPFHA 686

Query: 827 ENGNSGCFVGCGEPLNKWLLQS 848
               +G F+   + L  WL  S
Sbjct: 687 SESQAGSFISSRDDLVSWLQMS 708



 Score =  107 bits (267), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 89/350 (25%), Positives = 158/350 (45%), Gaps = 24/350 (6%)

Query: 280 IPAGLAPFSRHFASTGNVVESVSRILRQWKWGPLAEE----------ALGNTNYSMDAYQ 329
           +PAG  P    F    NV     R  RQW   P AE            L N  YS     
Sbjct: 178 LPAGAFPLDTIFF---NVALKSLRAARQW---PHAERLALDMLDAGVPLDNITYSTLITA 231

Query: 330 ANQVLKQLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRD 389
           A    ++ +    A+ +F  +    G   DE TY+ ++ +  +      +  L D+    
Sbjct: 232 A----RRCRQFAKAVEWFERMYAADGVLPDEVTYSAVLDVYAQLGMKEEVLALFDRARGS 287

Query: 390 GCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVA 449
           G +P+ V +  L   +G A   +    VFK+M+ VG +P+   Y  L++   K G   +A
Sbjct: 288 GWKPDHVAFAVLAKMFGEAGDYDGIQFVFKEMREVGIKPNIFVYNALLEALGKTGKPGLA 347

Query: 450 MDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIAL 509
            +++++M   G+ P+  T + +    G+A   + A QL+ +M       + +  N ++++
Sbjct: 348 RNLFEEMIDQGVEPNARTLTALAKIYGRARWGRDALQLWDKMRELKLPADSILCNTLLSM 407

Query: 510 QAKARNYQSALKLYRDMQNAGF----EPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKN 565
            A       A +L+ +M++       +PDK +Y+ ++ + G  G  D A  +FAEM +  
Sbjct: 408 CADVGLVAEAEQLFNEMKDPECRDVPKPDKWSYTAMINIYGSNGDTDSALQLFAEMLKGG 467

Query: 566 WVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAF 615
             P+   Y +++   GKA  +++A E  E+ L+ GL+P+   C  LLS  
Sbjct: 468 IEPNIMSYTIVIQCLGKAHRIQQAVEVLESGLEKGLKPDDRLCGCLLSVI 517



 Score =  100 bits (248), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 65/239 (27%), Positives = 117/239 (48%), Gaps = 2/239 (0%)

Query: 418 FKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSP-DTFTYSVIINCLG 476
           F Q Q  G  P       L++    +    +++  + +   AG  P DT  ++V +  L 
Sbjct: 139 FLQQQGQGAAPSPSDALLLLNYLHPSWRKSLSLLAWLRALPAGAFPLDTIFFNVALKSLR 198

Query: 477 KAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNA-GFEPDK 535
            A     A +L  +M++ G   + +TY+ +I    + R +  A++ +  M  A G  PD+
Sbjct: 199 AARQWPHAERLALDMLDAGVPLDNITYSTLITAARRCRQFAKAVEWFERMYAADGVLPDE 258

Query: 536 VTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEA 595
           VTYS V++V    G  +E  A+F   R   W PD   + +L  ++G+AG+       ++ 
Sbjct: 259 VTYSAVLDVYAQLGMKEEVLALFDRARGSGWKPDHVAFAVLAKMFGEAGDYDGIQFVFKE 318

Query: 596 MLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEAR 654
           M + G++PN+   N+LL A  + G+   A +L + M++ G++P+ +T T L      AR
Sbjct: 319 MREVGIKPNIFVYNALLEALGKTGKPGLARNLFEEMIDQGVEPNARTLTALAKIYGRAR 377


>gi|242096872|ref|XP_002438926.1| hypothetical protein SORBIDRAFT_10g028420 [Sorghum bicolor]
 gi|241917149|gb|EER90293.1| hypothetical protein SORBIDRAFT_10g028420 [Sorghum bicolor]
          Length = 924

 Score =  155 bits (393), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 118/438 (26%), Positives = 193/438 (44%), Gaps = 32/438 (7%)

Query: 302 SRILRQWKWGPLAEEALGNTNYSMDAYQANQVLK-QLQDHTVALGFF--NWLRRQAGFKH 358
           SRIL+Q          +    Y  D    N V++  L+ H     F   N +R+  G   
Sbjct: 403 SRILKQ----------MTKIGYMADTMTYNLVIEGHLRQHNKEEAFLLLNEMRK-GGISP 451

Query: 359 DEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVF 418
           + +TY+ ++  L +  +    + LL+QM+ DG +PN   Y  LI  Y R    + A +  
Sbjct: 452 NVYTYSIIINGLCQIGESERASGLLEQMIADGLKPNAFVYAPLISGYCREGSFSLACETL 511

Query: 419 KQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKA 478
           K+M      PD   Y +LI   +  G +D A++ Y +M   G  P+ FTY  +I+    A
Sbjct: 512 KKMTRENLTPDLYCYNSLIIGLSNVGKMDEAIEYYDEMLEKGFQPNDFTYGGLIHGYSMA 571

Query: 479 GHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTY 538
           G+L+ A QL  +M+N G  PN   Y  ++    K+ N +      + M   G  PD   Y
Sbjct: 572 GNLEKAEQLLHQMLNSGLNPNDFIYAQILEGYFKSDNLEKVSSTLKSMLEKGLMPDNRLY 631

Query: 539 SIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQ 598
            IV+  L   G++  A +V + + +   VPD  +YG L+  + KA ++ KA    + M +
Sbjct: 632 GIVIHNLSSSGHMQAAVSVLSVIEKNGLVPDSLIYGSLISGFCKAADMEKAVGLLDEMAK 691

Query: 599 AGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYD 658
            G+ P +   N+L+  F +   +S A ++   ++  GL P+  TYT L+    +A    D
Sbjct: 692 KGIEPGISCYNALIDGFCKSDDISHARNIFNSIICKGLPPNCVTYTTLIDGYCKAGDIRD 751

Query: 659 MGFCHELMAVSGHPAHMFLLSMPSPGPDGQN-------------VRDH--VGSFLEMMHS 703
               +  M   G     F+ S+ + G                   R +  + SF  ++H 
Sbjct: 752 AIDLYNEMLTEGVAPDAFVYSVLAAGCSNSGDLQQALFITEEMIARGYAIISSFNTLVHG 811

Query: 704 EDRESKRGLVDAVVDFLH 721
                KRG +   V FLH
Sbjct: 812 ---FCKRGKLQETVKFLH 826



 Score =  145 bits (365), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 88/275 (32%), Positives = 140/275 (50%), Gaps = 11/275 (4%)

Query: 390 GCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVA 449
           G  P+V TY+ LI +Y +   L  A  V ++M+  GC  + VTY TLI    +AG ++ A
Sbjct: 238 GISPDVYTYSTLIEAYCKVRDLESAKKVVEEMRETGCSLNVVTYNTLIGGLCRAGAIEEA 297

Query: 450 MDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIAL 509
               K+M+  GL PD FTY  IIN L K G    A  L  EM   G +PN+V Y+ +I  
Sbjct: 298 FGYKKEMEDYGLVPDGFTYGAIINGLCKRGRPDQAKCLLDEMSCAGLMPNVVVYSTLIDG 357

Query: 510 QAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPD 569
             +  N   A K+ ++M  AG +P+K+TY  ++  L   G +  A  +  +M +  ++ D
Sbjct: 358 FMRQGNADEAFKIVKEMSAAGVQPNKITYDNLIRGLCKLGRMGRASRILKQMTKIGYMAD 417

Query: 570 EPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQ 629
              Y L+++   +  N  +A+     M + G+ PNV T + +++   ++G+   A  LL+
Sbjct: 418 TMTYNLVIEGHLRQHNKEEAFLLLNEMRKGGISPNVYTYSIIINGLCQIGESERASGLLE 477

Query: 630 GMLNLGLKPSLQTYTLLLSCCTEARSPYDMGFCHE 664
            M+  GLKP+   Y  L+S           G+C E
Sbjct: 478 QMIADGLKPNAFVYAPLIS-----------GYCRE 501



 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 114/428 (26%), Positives = 183/428 (42%), Gaps = 35/428 (8%)

Query: 354 AGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNE 413
           AG   D +TY+T++    + R   +  K++++M   GC  NVVTYN LI    RA  + E
Sbjct: 237 AGISPDVYTYSTLIEAYCKVRDLESAKKVVEEMRETGCSLNVVTYNTLIGGLCRAGAIEE 296

Query: 414 ALDVFKQMQVVGCEPDR-----------------------------------VTYCTLID 438
           A    K+M+  G  PD                                    V Y TLID
Sbjct: 297 AFGYKKEMEDYGLVPDGFTYGAIINGLCKRGRPDQAKCLLDEMSCAGLMPNVVVYSTLID 356

Query: 439 IHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIP 498
              + G  D A  + K+M AAG+ P+  TY  +I  L K G +  A ++  +M   G + 
Sbjct: 357 GFMRQGNADEAFKIVKEMSAAGVQPNKITYDNLIRGLCKLGRMGRASRILKQMTKIGYMA 416

Query: 499 NLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVF 558
           + +TYN++I    +  N + A  L  +M+  G  P+  TYSI++  L   G  + A  + 
Sbjct: 417 DTMTYNLVIEGHLRQHNKEEAFLLLNEMRKGGISPNVYTYSIIINGLCQIGESERASGLL 476

Query: 559 AEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRV 618
            +M      P+  VY  L+  + + G+   A E  + M +  L P++   NSL+     V
Sbjct: 477 EQMIADGLKPNAFVYAPLISGYCREGSFSLACETLKKMTRENLTPDLYCYNSLIIGLSNV 536

Query: 619 GQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGFCHELMAVSGHPAHMFLL 678
           G++ +A      ML  G +P+  TY  L+   + A +          M  SG   + F+ 
Sbjct: 537 GKMDEAIEYYDEMLEKGFQPNDFTYGGLIHGYSMAGNLEKAEQLLHQMLNSGLNPNDFIY 596

Query: 679 SMPSPGPDGQNVRDHVGSFLEMMHSEDRESKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQ 738
           +    G    +  + V S L+ M  +       L   V+  L  SG  + A SV  V  +
Sbjct: 597 AQILEGYFKSDNLEKVSSTLKSMLEKGLMPDNRLYGIVIHNLSSSGHMQAAVSVLSVIEK 656

Query: 739 KNVYPDAV 746
             + PD++
Sbjct: 657 NGLVPDSL 664



 Score =  124 bits (312), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 81/308 (26%), Positives = 138/308 (44%)

Query: 359 DEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVF 418
           D + Y +++  L    +     +  D+M+  G QPN  TY  LIH Y  A  L +A  + 
Sbjct: 522 DLYCYNSLIIGLSNVGKMDEAIEYYDEMLEKGFQPNDFTYGGLIHGYSMAGNLEKAEQLL 581

Query: 419 KQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKA 478
            QM   G  P+   Y  +++ + K+  L+      K M   GL PD   Y ++I+ L  +
Sbjct: 582 HQMLNSGLNPNDFIYAQILEGYFKSDNLEKVSSTLKSMLEKGLMPDNRLYGIVIHNLSSS 641

Query: 479 GHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTY 538
           GH+QAA  +   +   G +P+ + Y  +I+   KA + + A+ L  +M   G EP    Y
Sbjct: 642 GHMQAAVSVLSVIEKNGLVPDSLIYGSLISGFCKAADMEKAVGLLDEMAKKGIEPGISCY 701

Query: 539 SIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQ 598
           + +++       +  A  +F  +  K   P+   Y  L+D + KAG++R A + Y  ML 
Sbjct: 702 NALIDGFCKSDDISHARNIFNSIICKGLPPNCVTYTTLIDGYCKAGDIRDAIDLYNEMLT 761

Query: 599 AGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYD 658
            G+ P+    + L +     G L  A  + + M+  G        TL+   C   +    
Sbjct: 762 EGVAPDAFVYSVLAAGCSNSGDLQQALFITEEMIARGYAIISSFNTLVHGFCKRGKLQET 821

Query: 659 MGFCHELM 666
           + F H +M
Sbjct: 822 VKFLHVMM 829



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 88/323 (27%), Positives = 150/323 (46%), Gaps = 19/323 (5%)

Query: 344 LGFFNWLR-RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVV------ 396
           L FF W R R A        +  +   L  A  +   N LLDQM+R    P +V      
Sbjct: 103 LDFFYWSRTRLAPSAPAPDAFAHLAVSLCAAGLYPQANGLLDQMIRAYPTPPLVLSSVHR 162

Query: 397 ------------TYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAG 444
                         + L+ +Y +   + +  +V   M+ +G  P       L+    +A 
Sbjct: 163 ALSGSDQGRRPVVLDVLVDTYKKTGRVRDGAEVVLLMKDLGLAPSLRCCNGLLKDLLRAD 222

Query: 445 FLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYN 504
            LD+   +   M+ AG+SPD +TYS +I    K   L++A ++  EM   GC  N+VTYN
Sbjct: 223 ALDLLWKVRGFMEGAGISPDVYTYSTLIEAYCKVRDLESAKKVVEEMRETGCSLNVVTYN 282

Query: 505 IMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRK 564
            +I    +A   + A    ++M++ G  PD  TY  ++  L   G  D+A+ +  EM   
Sbjct: 283 TLIGGLCRAGAIEEAFGYKKEMEDYGLVPDGFTYGAIINGLCKRGRPDQAKCLLDEMSCA 342

Query: 565 NWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDA 624
             +P+  VY  L+D + + GN  +A++  + M  AG++PN  T ++L+    ++G++  A
Sbjct: 343 GLMPNVVVYSTLIDGFMRQGNADEAFKIVKEMSAAGVQPNKITYDNLIRGLCKLGRMGRA 402

Query: 625 YHLLQGMLNLGLKPSLQTYTLLL 647
             +L+ M  +G      TY L++
Sbjct: 403 SRILKQMTKIGYMADTMTYNLVI 425



 Score =  114 bits (286), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 78/329 (23%), Positives = 147/329 (44%), Gaps = 35/329 (10%)

Query: 354 AGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNE 413
           AG + ++ TY  ++  L +  + G  +++L QM + G   + +TYN +I  + R +   E
Sbjct: 377 AGVQPNKITYDNLIRGLCKLGRMGRASRILKQMTKIGYMADTMTYNLVIEGHLRQHNKEE 436

Query: 414 ALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIIN 473
           A  +  +M+  G  P+  TY  +I+   + G  + A  + ++M A GL P+ F Y+ +I+
Sbjct: 437 AFLLLNEMRKGGISPNVYTYSIIINGLCQIGESERASGLLEQMIADGLKPNAFVYAPLIS 496

Query: 474 CLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEP 533
              + G    A +   +M  +   P+L  YN +I   +       A++ Y +M   GF+P
Sbjct: 497 GYCREGSFSLACETLKKMTRENLTPDLYCYNSLIIGLSNVGKMDEAIEYYDEMLEKGFQP 556

Query: 534 DKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWY 593
           +  TY  ++      G L++AE +  +M      P++ +Y  +++ + K+ N+ K     
Sbjct: 557 NDFTYGGLIHGYSMAGNLEKAEQLLHQMLNSGLNPNDFIYAQILEGYFKSDNLEKVSSTL 616

Query: 594 EAMLQAGLRPN--------------------------------VPTC---NSLLSAFLRV 618
           ++ML+ GL P+                                VP      SL+S F + 
Sbjct: 617 KSMLEKGLMPDNRLYGIVIHNLSSSGHMQAAVSVLSVIEKNGLVPDSLIYGSLISGFCKA 676

Query: 619 GQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
             +  A  LL  M   G++P +  Y  L+
Sbjct: 677 ADMEKAVGLLDEMAKKGIEPGISCYNALI 705



 Score =  109 bits (272), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 63/211 (29%), Positives = 107/211 (50%), Gaps = 1/211 (0%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           G   D   Y +++    +A        LLD+M + G +P +  YN LI  + +++ ++ A
Sbjct: 658 GLVPDSLIYGSLISGFCKAADMEKAVGLLDEMAKKGIEPGISCYNALIDGFCKSDDISHA 717

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
            ++F  +   G  P+ VTY TLID + KAG +  A+D+Y +M   G++PD F YSV+   
Sbjct: 718 RNIFNSIICKGLPPNCVTYTTLIDGYCKAGDIRDAIDLYNEMLTEGVAPDAFVYSVLAAG 777

Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPD 534
              +G LQ A  +  EM+ +G    + ++N ++    K    Q  +K    M +    P 
Sbjct: 778 CSNSGDLQQALFITEEMIARG-YAIISSFNTLVHGFCKRGKLQETVKFLHVMMDKDIVPS 836

Query: 535 KVTYSIVMEVLGHCGYLDEAEAVFAEMRRKN 565
            +T   ++  LG  G L EA  +F E+++KN
Sbjct: 837 LLTVENIVIGLGEAGKLSEAHTIFVELQQKN 867



 Score = 42.4 bits (98), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 40/186 (21%), Positives = 71/186 (38%), Gaps = 36/186 (19%)

Query: 470 VIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNA 529
           V+++   K G ++   ++   M + G  P+L   N ++    +A       K+   M+ A
Sbjct: 178 VLVDTYKKTGRVRDGAEVVLLMKDLGLAPSLRCCNGLLKDLLRADALDLLWKVRGFMEGA 237

Query: 530 GFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKA 589
           G  PD  TYS                                    L++ + K  ++  A
Sbjct: 238 GISPDVYTYST-----------------------------------LIEAYCKVRDLESA 262

Query: 590 WEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS- 648
            +  E M + G   NV T N+L+    R G + +A+   + M + GL P   TY  +++ 
Sbjct: 263 KKVVEEMRETGCSLNVVTYNTLIGGLCRAGAIEEAFGYKKEMEDYGLVPDGFTYGAIING 322

Query: 649 CCTEAR 654
            C   R
Sbjct: 323 LCKRGR 328



 Score = 39.3 bits (90), Expect = 8.8,   Method: Compositional matrix adjust.
 Identities = 27/83 (32%), Positives = 38/83 (45%)

Query: 572 VYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGM 631
           V  +LVD + K G VR   E    M   GL P++  CN LL   LR   L   + +   M
Sbjct: 175 VLDVLVDTYKKTGRVRDGAEVVLLMKDLGLAPSLRCCNGLLKDLLRADALDLLWKVRGFM 234

Query: 632 LNLGLKPSLQTYTLLLSCCTEAR 654
              G+ P + TY+ L+    + R
Sbjct: 235 EGAGISPDVYTYSTLIEAYCKVR 257


>gi|147861320|emb|CAN83994.1| hypothetical protein VITISV_031191 [Vitis vinifera]
          Length = 559

 Score =  155 bits (393), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 86/264 (32%), Positives = 147/264 (55%)

Query: 384 DQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKA 443
           ++++  G  P+V  +N L+H   + + +NEA  +F ++   G  P  V++ TLI+ + K+
Sbjct: 214 EEILDCGYPPDVCKFNVLMHRLCKEHKINEAQLLFGEIGKRGLRPTVVSFNTLINGYCKS 273

Query: 444 GFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTY 503
           G LD    + + M    + PD FTYSV+IN L K G L  A++LF EM ++G +PN VT+
Sbjct: 274 GNLDQGFRLKRFMMENRVFPDVFTYSVLINGLCKEGQLDDANKLFLEMCDRGLVPNDVTF 333

Query: 504 NIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRR 563
             +I            +++Y+ M   G +PD +TY+ ++  L   G L EA+ +  EM +
Sbjct: 334 TTLINGHCVTGRADLGMEIYQQMLRKGVKPDVITYNTLINGLCKVGDLREAKKLVIEMTQ 393

Query: 564 KNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSD 623
           +   PD+  Y +L+D   K G++  A E  + M++ G+  +     +L+S F R GQ+ +
Sbjct: 394 RGLKPDKFTYTMLIDGCCKEGDLESALEIRKEMVKEGIELDNVAFTALISGFCREGQVIE 453

Query: 624 AYHLLQGMLNLGLKPSLQTYTLLL 647
           A   L+ ML  G+KP   TYT+++
Sbjct: 454 AERTLREMLEAGIKPDDATYTMVI 477



 Score =  155 bits (391), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 106/361 (29%), Positives = 184/361 (50%), Gaps = 7/361 (1%)

Query: 291 FASTGNVVESVSRI-LRQWKWGPLAEEALGNTNYSMDAYQANQVLKQL-QDHTV--ALGF 346
           F S G + + + ++ L    W    EE L +  Y  D  + N ++ +L ++H +  A   
Sbjct: 190 FHSCGYLFDRLMKLNLTSPAWA-FYEEIL-DCGYPPDVCKFNVLMHRLCKEHKINEAQLL 247

Query: 347 FNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYG 406
           F  + ++ G +    ++ T++    ++       +L   M+ +   P+V TY+ LI+   
Sbjct: 248 FGEIGKR-GLRPTVVSFNTLINGYCKSGNLDQGFRLKRFMMENRVFPDVFTYSVLINGLC 306

Query: 407 RANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTF 466
           +   L++A  +F +M   G  P+ VT+ TLI+ H   G  D+ M++Y++M   G+ PD  
Sbjct: 307 KEGQLDDANKLFLEMCDRGLVPNDVTFTTLINGHCVTGRADLGMEIYQQMLRKGVKPDVI 366

Query: 467 TYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDM 526
           TY+ +IN L K G L+ A +L  EM  +G  P+  TY ++I    K  + +SAL++ ++M
Sbjct: 367 TYNTLINGLCKVGDLREAKKLVIEMTQRGLKPDKFTYTMLIDGCCKEGDLESALEIRKEM 426

Query: 527 QNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNV 586
              G E D V ++ ++      G + EAE    EM      PD+  Y +++  + K G+V
Sbjct: 427 VKEGIELDNVAFTALISGFCREGQVIEAERTLREMLEAGIKPDDATYTMVIHGFCKKGDV 486

Query: 587 RKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLL 646
           +  ++  + M   G  P V T N LL+   + GQ+ +A  LL  MLNLG+ P   TY +L
Sbjct: 487 KTGFKLLKEMQCDGHVPGVVTYNVLLNGLCKQGQMKNANMLLDAMLNLGVVPDDITYNIL 546

Query: 647 L 647
           L
Sbjct: 547 L 547



 Score =  135 bits (339), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 93/329 (28%), Positives = 153/329 (46%), Gaps = 20/329 (6%)

Query: 344 LGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMV---------------- 387
           L FF WL  Q  F+   H+Y TM   L   +       LL  +V                
Sbjct: 87  LSFFKWLSTQHHFRLSIHSYCTMTHFLCTHKMLSEAQSLLQFVVSRKGKNSASSVFTSVL 146

Query: 388 --RDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGF 445
             R   Q N+V ++ L+++Y  + Y ++A+  F+ ++    +    +   L D   K   
Sbjct: 147 EARGTHQSNLV-FSVLMNAYTDSGYFSDAIQCFRLVRKHNLQIPFHSCGYLFDRLMKLNL 205

Query: 446 LDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNI 505
              A   Y+++   G  PD   ++V+++ L K   +  A  LF E+  +G  P +V++N 
Sbjct: 206 TSPAWAFYEEILDCGYPPDVCKFNVLMHRLCKEHKINEAQLLFGEIGKRGLRPTVVSFNT 265

Query: 506 MIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKN 565
           +I    K+ N     +L R M      PD  TYS+++  L   G LD+A  +F EM  + 
Sbjct: 266 LINGYCKSGNLDQGFRLKRFMMENRVFPDVFTYSVLINGLCKEGQLDDANKLFLEMCDRG 325

Query: 566 WVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAY 625
            VP++  +  L++     G      E Y+ ML+ G++P+V T N+L++   +VG L +A 
Sbjct: 326 LVPNDVTFTTLINGHCVTGRADLGMEIYQQMLRKGVKPDVITYNTLINGLCKVGDLREAK 385

Query: 626 HLLQGMLNLGLKPSLQTYTLLLS-CCTEA 653
            L+  M   GLKP   TYT+L+  CC E 
Sbjct: 386 KLVIEMTQRGLKPDKFTYTMLIDGCCKEG 414



 Score =  100 bits (250), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 60/191 (31%), Positives = 97/191 (50%)

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
           + G K D  TY T++  L +        KL+ +M + G +P+  TY  LI    +   L 
Sbjct: 358 RKGVKPDVITYNTLINGLCKVGDLREAKKLVIEMTQRGLKPDKFTYTMLIDGCCKEGDLE 417

Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
            AL++ K+M   G E D V +  LI    + G +  A    ++M  AG+ PD  TY+++I
Sbjct: 418 SALEIRKEMVKEGIELDNVAFTALISGFCREGQVIEAERTLREMLEAGIKPDDATYTMVI 477

Query: 473 NCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFE 532
           +   K G ++   +L  EM   G +P +VTYN+++    K    ++A  L   M N G  
Sbjct: 478 HGFCKKGDVKTGFKLLKEMQCDGHVPGVVTYNVLLNGLCKQGQMKNANMLLDAMLNLGVV 537

Query: 533 PDKVTYSIVME 543
           PD +TY+I++E
Sbjct: 538 PDDITYNILLE 548


>gi|26452823|dbj|BAC43491.1| putative salt-inducible protein [Arabidopsis thaliana]
          Length = 702

 Score =  155 bits (393), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 124/524 (23%), Positives = 239/524 (45%), Gaps = 25/524 (4%)

Query: 332 QVLKQLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLD---QMVR 388
           +V ++ +D   +   F+ +  + G K D  T+TT++     ARQ G   + ++   +M  
Sbjct: 183 KVFRKSKDLEKSEKLFDEMLER-GIKPDNATFTTIISC---ARQNGVPKRAVEWFEKMSS 238

Query: 389 DGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDV 448
            GC+P+ VT   +I +YGRA  ++ AL ++ + +      D VT+ TLI I+  +G  D 
Sbjct: 239 FGCEPDNVTMAAMIDAYGRAGNVDMALSLYDRARTEKWRIDAVTFSTLIRIYGVSGNYDG 298

Query: 449 AMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIA 508
            +++Y++M+A G+ P+   Y+ +I+ +G+A     A  ++ +++  G  PN  TY  ++ 
Sbjct: 299 CLNIYEEMKALGVKPNLVIYNRLIDSMGRAKRPWQAKIIYKDLITNGFTPNWSTYAALVR 358

Query: 509 LQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRR-KNWV 567
              +AR    AL +YR+M+  G     + Y+ ++ +    GY+DEA  +F +M+  +   
Sbjct: 359 AYGRARYGDDALAIYREMKEKGLSLTVILYNTLLSMCADIGYVDEAFEIFQDMKNCETCD 418

Query: 568 PDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHL 627
           PD   +  L+ ++  +G V +A      M +AG  P +    S++  + +  Q+ D    
Sbjct: 419 PDSWTFSSLITVYACSGRVSEAEAALLQMREAGFEPTLFVLTSVIQCYGKAKQVDDVVRT 478

Query: 628 LQGMLNLGLKPSLQTYTLLLSCCTEARSPYD---MGFCHELMAVSGHPAHMFLLSMPSPG 684
              +L LG+ P  +    LL+  T+  S      +G   +     G    M +       
Sbjct: 479 FDQVLELGITPDDRFCGCLLNVMTQTPSEEIGKLIGCVEKAKPKLGQVVKMLV------- 531

Query: 685 PDGQNVRDHV--GSFLEMMHSEDRESKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVY 742
            + QN  + V      E++ S   + K+  ++ ++D        E A  + ++  + ++Y
Sbjct: 532 -EEQNCEEGVFKKEASELIDSIGSDVKKAYLNCLIDLCVNLNKLERACEILQLGLEYDIY 590

Query: 743 PDAVKEKGMSYWLINLHVMSDGTAVIALSRTLAWFRKQMLISGVG-PSRIDIVTGWGRRS 801
              ++ K  + W ++L  +S G A+ AL   +    +  L SG   P  + I TG G+  
Sbjct: 591 -TGLQSKSATQWSLHLKSLSLGAALTALHVWMNDLSEAALESGEEFPPLLGINTGHGKH- 648

Query: 802 RVTGTSLVRQAVQELLHMFSFPFFTENGNSGCFVGCGEPLNKWL 845
           + +   L     +  L   + PF       G F+        WL
Sbjct: 649 KYSDKGLA-AVFESHLKELNAPFHEAPDKVGWFLTTSVAAKAWL 691



 Score =  101 bits (251), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 77/308 (25%), Positives = 138/308 (44%), Gaps = 22/308 (7%)

Query: 375 QFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQ------------ 422
           ++ ++ KL + +  D C+PN      +I  +G   +  +A+     M             
Sbjct: 108 RYSSLIKLAESL--DACKPNEADVCDVITGFGGKLFEQDAVVTLNNMTNPETAPLVLNNL 165

Query: 423 VVGCEPDR--VTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGH 480
           +   +P R  + Y   + +  K+  L+ +  ++ +M   G+ PD  T++ II+C  + G 
Sbjct: 166 LETMKPSREVILYNVTMKVFRKSKDLEKSEKLFDEMLERGIKPDNATFTTIISCARQNGV 225

Query: 481 LQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSI 540
            + A + F +M + GC P+ VT   MI    +A N   AL LY   +   +  D VT+S 
Sbjct: 226 PKRAVEWFEKMSSFGCEPDNVTMAAMIDAYGRAGNVDMALSLYDRARTEKWRIDAVTFST 285

Query: 541 VMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAG 600
           ++ + G  G  D    ++ EM+     P+  +Y  L+D  G+A    +A   Y+ ++  G
Sbjct: 286 LIRIYGVSGNYDGCLNIYEEMKALGVKPNLVIYNRLIDSMGRAKRPWQAKIIYKDLITNG 345

Query: 601 LRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMG 660
             PN  T  +L+ A+ R     DA  + + M   GL  ++  Y  LLS C       D+G
Sbjct: 346 FTPNWSTYAALVRAYGRARYGDDALAIYREMKEKGLSLTVILYNTLLSMCA------DIG 399

Query: 661 FCHELMAV 668
           +  E   +
Sbjct: 400 YVDEAFEI 407



 Score = 68.6 bits (166), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 39/171 (22%), Positives = 79/171 (46%)

Query: 500 LVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFA 559
           ++ YN+ + +  K+++ + + KL+ +M   G +PD  T++ ++      G    A   F 
Sbjct: 175 VILYNVTMKVFRKSKDLEKSEKLFDEMLERGIKPDNATFTTIISCARQNGVPKRAVEWFE 234

Query: 560 EMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVG 619
           +M      PD      ++D +G+AGNV  A   Y+       R +  T ++L+  +   G
Sbjct: 235 KMSSFGCEPDNVTMAAMIDAYGRAGNVDMALSLYDRARTEKWRIDAVTFSTLIRIYGVSG 294

Query: 620 QLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGFCHELMAVSG 670
                 ++ + M  LG+KP+L  Y  L+     A+ P+     ++ +  +G
Sbjct: 295 NYDGCLNIYEEMKALGVKPNLVIYNRLIDSMGRAKRPWQAKIIYKDLITNG 345


>gi|224103543|ref|XP_002313097.1| predicted protein [Populus trichocarpa]
 gi|222849505|gb|EEE87052.1| predicted protein [Populus trichocarpa]
          Length = 751

 Score =  155 bits (392), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 96/306 (31%), Positives = 158/306 (51%), Gaps = 6/306 (1%)

Query: 347 FNWLRRQA--GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHS 404
           F  LR     G + +  TY  ++  L R  +    + +L +M R G  P+ VTYN L++ 
Sbjct: 258 FKLLRSMGLEGLEPNLLTYNMVINGLCRVGRIEETSGVLAEMDRKGFAPDGVTYNTLVNG 317

Query: 405 YGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPD 464
           Y +    ++AL +  +M   G  PD VTY +LI+   KAG L+ AM+ + +M   GL P+
Sbjct: 318 YCKVGNFHQALVLHSEMLRNGLPPDVVTYTSLINTMCKAGNLNRAMEFFDQMHVRGLRPN 377

Query: 465 TFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYR 524
             TY+ +IN   + G +  A++++ EM+  G  P +VTYN ++     +   + A+ L R
Sbjct: 378 GVTYTSLINGFSQKGFMDEAYRIWDEMIRSGFPPTIVTYNALLNGHCVSGRMEEAIGLLR 437

Query: 525 DMQNAGFEPDKVTYSIVMEVLGHCGY--LDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGK 582
            M+  G  PD V+YS +  + G C Y  LD A  + AEM  K   PD   Y  L+    +
Sbjct: 438 GMEGKGLSPDVVSYSTI--IAGFCRYQELDRAFQMNAEMVEKGVSPDAITYSSLIQGLCE 495

Query: 583 AGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQT 642
              + +A + ++ ML   L P+  T  SL++ + + G L++A +L   M+  G  P   T
Sbjct: 496 QRRLNEACDLFQEMLNKSLLPDEFTYTSLINGYCKEGDLNEALNLHDEMIKKGFLPDTVT 555

Query: 643 YTLLLS 648
           Y +L++
Sbjct: 556 YNVLIN 561



 Score =  155 bits (391), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 97/314 (30%), Positives = 166/314 (52%), Gaps = 4/314 (1%)

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
           + GF  D  TY T+V    +   F     L  +M+R+G  P+VVTY  LI++  +A  LN
Sbjct: 301 RKGFAPDGVTYNTLVNGYCKVGNFHQALVLHSEMLRNGLPPDVVTYTSLINTMCKAGNLN 360

Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
            A++ F QM V G  P+ VTY +LI+  ++ GF+D A  ++ +M  +G  P   TY+ ++
Sbjct: 361 RAMEFFDQMHVRGLRPNGVTYTSLINGFSQKGFMDEAYRIWDEMIRSGFPPTIVTYNALL 420

Query: 473 NCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFE 532
           N    +G ++ A  L   M  +G  P++V+Y+ +IA   + +    A ++  +M   G  
Sbjct: 421 NGHCVSGRMEEAIGLLRGMEGKGLSPDVVSYSTIIAGFCRYQELDRAFQMNAEMVEKGVS 480

Query: 533 PDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEW 592
           PD +TYS +++ L     L+EA  +F EM  K+ +PDE  Y  L++ + K G++ +A   
Sbjct: 481 PDAITYSSLIQGLCEQRRLNEACDLFQEMLNKSLLPDEFTYTSLINGYCKEGDLNEALNL 540

Query: 593 YEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCT- 651
           ++ M++ G  P+  T N L++   +  +  +A  LL  +      P+  TY  L+  C+ 
Sbjct: 541 HDEMIKKGFLPDTVTYNVLINGLNKQARTREAKRLLLKLFYDESIPNGITYDTLIESCSD 600

Query: 652 -EARSPYDM--GFC 662
            E +S   +  GFC
Sbjct: 601 IEFKSVVALIKGFC 614



 Score =  150 bits (378), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 130/506 (25%), Positives = 229/506 (45%), Gaps = 25/506 (4%)

Query: 260 DAKVVECVSERFSKPSREMKIPAGLAPFSRHFASTGNVVESVSRILRQWKWGPLAEEALG 319
           D  V  C    F + +  +   A L  F     S   +++S+ R  +   +       + 
Sbjct: 136 DLVVKSCSYLNFIEKALNIVDLAKLNGFMPGVLSYNAILDSIVRCRKPVIFAEKVYREMI 195

Query: 320 NTNYSMDAYQANQVLKQL---QDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQF 376
            +  S++ +  N +++      +  + L FF  + R      +  TY T++G   + ++ 
Sbjct: 196 ASGVSLNVFSYNILIRGFCAAGNLEMGLRFFEEMERNRCLP-NVVTYNTVIGAYCKLKRI 254

Query: 377 GAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTL 436
               KLL  M  +G +PN++TYN +I+   R   + E   V  +M   G  PD VTY TL
Sbjct: 255 DEAFKLLRSMGLEGLEPNLLTYNMVINGLCRVGRIEETSGVLAEMDRKGFAPDGVTYNTL 314

Query: 437 IDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGC 496
           ++ + K G    A+ ++ +M   GL PD  TY+ +IN + KAG+L  A + F +M  +G 
Sbjct: 315 VNGYCKVGNFHQALVLHSEMLRNGLPPDVVTYTSLINTMCKAGNLNRAMEFFDQMHVRGL 374

Query: 497 IPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHC--GYLDEA 554
            PN VTY  +I   ++      A +++ +M  +GF P  VTY+ ++   GHC  G ++EA
Sbjct: 375 RPNGVTYTSLINGFSQKGFMDEAYRIWDEMIRSGFPPTIVTYNALLN--GHCVSGRMEEA 432

Query: 555 EAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSA 614
             +   M  K   PD   Y  ++  + +   + +A++    M++ G+ P+  T +SL+  
Sbjct: 433 IGLLRGMEGKGLSPDVVSYSTIIAGFCRYQELDRAFQMNAEMVEKGVSPDAITYSSLIQG 492

Query: 615 FLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS-CCTEARSPYDMGFCHELMAVSGHPA 673
                +L++A  L Q MLN  L P   TYT L++  C E      +   H+ M   G   
Sbjct: 493 LCEQRRLNEACDLFQEMLNKSLLPDEFTYTSLINGYCKEGDLNEALNL-HDEMIKKGFLP 551

Query: 674 HMFLLSMPSPGPDGQ-NVRDHVGSFLEMMHSE---DRESKRGLVDAVVDFLHKS------ 723
                ++   G + Q   R+     L++ + E   +  +   L+++  D   KS      
Sbjct: 552 DTVTYNVLINGLNKQARTREAKRLLLKLFYDESIPNGITYDTLIESCSDIEFKSVVALIK 611

Query: 724 -----GLKEEAGSVWEVAAQKNVYPD 744
                GL  EA  V+E   ++N  P+
Sbjct: 612 GFCMKGLMNEADQVFESMIKRNQKPN 637



 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 92/327 (28%), Positives = 149/327 (45%), Gaps = 51/327 (15%)

Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLI 402
           A+ FF+ +  + G + +  TYT+++    +        ++ D+M+R G  P +VTYN L+
Sbjct: 362 AMEFFDQMHVR-GLRPNGVTYTSLINGFSQKGFMDEAYRIWDEMIRSGFPPTIVTYNALL 420

Query: 403 HSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLS 462
           + +  +  + EA+ + + M+  G  PD V+Y T+I    +   LD A  M  +M   G+S
Sbjct: 421 NGHCVSGRMEEAIGLLRGMEGKGLSPDVVSYSTIIAGFCRYQELDRAFQMNAEMVEKGVS 480

Query: 463 PDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKL 522
           PD  TYS +I  L +   L  A  LF EM+N+  +P+  TY  +I    K  +   AL L
Sbjct: 481 PDAITYSSLIQGLCEQRRLNEACDLFQEMLNKSLLPDEFTYTSLINGYCKEGDLNEALNL 540

Query: 523 YRDMQNAGFEPDKVTY-------------------------------------------- 538
           + +M   GF PD VTY                                            
Sbjct: 541 HDEMIKKGFLPDTVTYNVLINGLNKQARTREAKRLLLKLFYDESIPNGITYDTLIESCSD 600

Query: 539 ----SIVMEVLGHC--GYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEW 592
               S+V  + G C  G ++EA+ VF  M ++N  P+E VY +++    + GNV KA + 
Sbjct: 601 IEFKSVVALIKGFCMKGLMNEADQVFESMIKRNQKPNEAVYNVIIHGHCRDGNVHKAHKL 660

Query: 593 YEAMLQAGLRPNVPTCNSLLSAFLRVG 619
           Y+ M+  G  P+  T  +L+ A    G
Sbjct: 661 YKEMVDFGFIPHTVTIIALVKALYSEG 687



 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 86/345 (24%), Positives = 151/345 (43%), Gaps = 59/345 (17%)

Query: 330 ANQVLKQLQ-DHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVR 388
           A+ +L Q Q D T+ L F N+ +    F  + H     + IL + + +     L   +  
Sbjct: 50  ASYLLLQTQNDRTLTLKFINFAKPHQFF--NPHCKCIALHILTKFKLYKTAQNLAQDLAE 107

Query: 389 DG------------------CQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDR 430
           +                   C  +   ++ ++ S    N++ +AL++    ++ G  P  
Sbjct: 108 NSVDEKGNYFFQCLKDTYFMCNSSSAVFDLVVKSCSYLNFIEKALNIVDLAKLNGFMPGV 167

Query: 431 VTYCTLID--IHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLF 488
           ++Y  ++D  +  +   +  A  +Y++M A+G+S + F+Y+++I     AG+L+   + F
Sbjct: 168 LSYNAILDSIVRCRKPVI-FAEKVYREMIASGVSLNVFSYNILIRGFCAAGNLEMGLRFF 226

Query: 489 CEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHC 548
            EM    C+PN+VTYN +I    K +    A KL R M   G EP+ +TY++V+  L   
Sbjct: 227 EEMERNRCLPNVVTYNTVIGAYCKLKRIDEAFKLLRSMGLEGLEPNLLTYNMVINGLCRV 286

Query: 549 GYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTC 608
           G ++E   V AEM RK                                   G  P+  T 
Sbjct: 287 GRIEETSGVLAEMDRK-----------------------------------GFAPDGVTY 311

Query: 609 NSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEA 653
           N+L++ + +VG    A  L   ML  GL P + TYT L++   +A
Sbjct: 312 NTLVNGYCKVGNFHQALVLHSEMLRNGLPPDVVTYTSLINTMCKA 356



 Score =  106 bits (264), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 76/299 (25%), Positives = 125/299 (41%), Gaps = 50/299 (16%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           G   D  +Y+T++    R ++     ++  +MV  G  P+ +TY+ LI        LNEA
Sbjct: 443 GLSPDVVSYSTIIAGFCRYQELDRAFQMNAEMVEKGVSPDAITYSSLIQGLCEQRRLNEA 502

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
            D+F++M      PD  TY +LI+ + K G L+ A++++ +M   G  PDT TY+V+IN 
Sbjct: 503 CDLFQEMLNKSLLPDEFTYTSLINGYCKEGDLNEALNLHDEMIKKGFLPDTVTYNVLING 562

Query: 475 LGK--------------------------------------------------AGHLQAA 484
           L K                                                   G +  A
Sbjct: 563 LNKQARTREAKRLLLKLFYDESIPNGITYDTLIESCSDIEFKSVVALIKGFCMKGLMNEA 622

Query: 485 HQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEV 544
            Q+F  M+ +   PN   YN++I    +  N   A KLY++M + GF P  VT   +++ 
Sbjct: 623 DQVFESMIKRNQKPNEAVYNVIIHGHCRDGNVHKAHKLYKEMVDFGFIPHTVTIIALVKA 682

Query: 545 LGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRP 603
           L   G  ++   V  ++ R   + D  +   LV +  K GN+   +     M + G  P
Sbjct: 683 LYSEGMDEQLNLVIRDILRSCKLSDAELSKALVQINHKEGNIDAVFNLLTEMAKDGFLP 741



 Score = 69.7 bits (169), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 59/270 (21%), Positives = 116/270 (42%), Gaps = 7/270 (2%)

Query: 495 GCIPNLVTYNIMIALQAKARN-YQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDE 553
           G +P +++YN ++    + R     A K+YR+M  +G   +  +Y+I++      G L+ 
Sbjct: 162 GFMPGVLSYNAILDSIVRCRKPVIFAEKVYREMIASGVSLNVFSYNILIRGFCAAGNLEM 221

Query: 554 AEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLS 613
               F EM R   +P+   Y  ++  + K   + +A++   +M   GL PN+ T N +++
Sbjct: 222 GLRFFEEMERNRCLPNVVTYNTVIGAYCKLKRIDEAFKLLRSMGLEGLEPNLLTYNMVIN 281

Query: 614 AFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGFCHELMAVSGHPA 673
              RVG++ +   +L  M   G  P   TY  L++   +  + +     H  M  +G P 
Sbjct: 282 GLCRVGRIEETSGVLAEMDRKGFAPDGVTYNTLVNGYCKVGNFHQALVLHSEMLRNGLPP 341

Query: 674 HMF-LLSMPSPGPDGQNVRDHVGSFLEMMHSEDRESKRGLVDAVVDFLHKSGLKEEAGSV 732
            +    S+ +      N+ +    F + MH            ++++   + G  +EA  +
Sbjct: 342 DVVTYTSLINTMCKAGNL-NRAMEFFDQMHVRGLRPNGVTYTSLINGFSQKGFMDEAYRI 400

Query: 733 WEVAAQKNVYPDAVKEKGMSYWLINLHVMS 762
           W+   +    P  V        L+N H +S
Sbjct: 401 WDEMIRSGFPPTIVTYNA----LLNGHCVS 426


>gi|9755842|emb|CAC01928.1| 67kD chloroplastic RNA-binding protein, P67 [Arabidopsis thaliana]
          Length = 702

 Score =  155 bits (392), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 124/524 (23%), Positives = 239/524 (45%), Gaps = 25/524 (4%)

Query: 332 QVLKQLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLD---QMVR 388
           +V ++ +D   +   F+ +  + G K D  T+TT++     ARQ G   + ++   +M  
Sbjct: 183 KVFRKSKDLEKSEKLFDEMLER-GIKPDNATFTTIISC---ARQNGVPKRAVEWFEKMSS 238

Query: 389 DGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDV 448
            GC+P+ VT   +I +YGRA  ++ AL ++ + +      D VT+ TLI I+  +G  D 
Sbjct: 239 FGCEPDNVTMAAMIDAYGRAGNVDMALSLYDRARTEKWRIDAVTFSTLIRIYGVSGNYDG 298

Query: 449 AMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIA 508
            +++Y++M+A G+ P+   Y+ +I+ +G+A     A  ++ +++  G  PN  TY  ++ 
Sbjct: 299 CLNIYEEMKALGVKPNLVIYNRLIDSMGRAKRPWQAKIIYKDLITNGFTPNWSTYAALVR 358

Query: 509 LQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRR-KNWV 567
              +AR    AL +YR+M+  G     + Y+ ++ +    GY+DEA  +F +M+  +   
Sbjct: 359 AYGRARYGDDALAIYREMKEKGLSLTVILYNTLLSMCADIGYVDEAFEIFQDMKNCETCD 418

Query: 568 PDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHL 627
           PD   +  L+ ++  +G V +A      M +AG  P +    S++  + +  Q+ D    
Sbjct: 419 PDSWTFSSLITVYACSGRVSEAEAALLQMREAGFEPTLFVLTSVIQCYGKAKQVDDVVRT 478

Query: 628 LQGMLNLGLKPSLQTYTLLLSCCTEARSPYD---MGFCHELMAVSGHPAHMFLLSMPSPG 684
              +L LG+ P  +    LL+  T+  S      +G   +     G    M +       
Sbjct: 479 FDQVLELGITPDDRFCGCLLNVMTQTPSEEIGKLIGCVEKAKPKLGQVVKMLV------- 531

Query: 685 PDGQNVRDHV--GSFLEMMHSEDRESKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVY 742
            + QN  + V      E++ S   + K+  ++ ++D        E A  + ++  + ++Y
Sbjct: 532 -EEQNCEEGVFKKEASELIDSIGSDVKKAYLNCLIDLCVNLNKLERACEILQLGLEYDIY 590

Query: 743 PDAVKEKGMSYWLINLHVMSDGTAVIALSRTLAWFRKQMLISGVG-PSRIDIVTGWGRRS 801
              ++ K  + W ++L  +S G A+ AL   +    +  L SG   P  + I TG G+  
Sbjct: 591 -TGLQSKSATQWSLHLKSLSLGAALTALHVWMNDLSEAALESGEEFPPLLGINTGHGKH- 648

Query: 802 RVTGTSLVRQAVQELLHMFSFPFFTENGNSGCFVGCGEPLNKWL 845
           + +   L     +  L   + PF       G F+        WL
Sbjct: 649 KYSDKGLA-AVFESHLKELNAPFHEAPDKVGWFLTTSVAAKAWL 691



 Score =  101 bits (251), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 77/308 (25%), Positives = 138/308 (44%), Gaps = 22/308 (7%)

Query: 375 QFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQ------------ 422
           ++ ++ KL + +  D C+PN      +I  +G   +  +A+     M             
Sbjct: 108 RYSSLIKLAESL--DACKPNEADVCDVITGFGGKLFEQDAVVTLNNMTNPETAPLVLNNL 165

Query: 423 VVGCEPDR--VTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGH 480
           +   +P R  + Y   + +  K+  L+ +  ++ +M   G+ PD  T++ II+C  + G 
Sbjct: 166 LETMKPSREVILYNVTMKVFRKSKDLEKSEKLFDEMLERGIKPDNATFTTIISCARQNGV 225

Query: 481 LQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSI 540
            + A + F +M + GC P+ VT   MI    +A N   AL LY   +   +  D VT+S 
Sbjct: 226 PKRAVEWFEKMSSFGCEPDNVTMAAMIDAYGRAGNVDMALSLYDRARTEKWRIDAVTFST 285

Query: 541 VMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAG 600
           ++ + G  G  D    ++ EM+     P+  +Y  L+D  G+A    +A   Y+ ++  G
Sbjct: 286 LIRIYGVSGNYDGCLNIYEEMKALGVKPNLVIYNRLIDSMGRAKRPWQAKIIYKDLITNG 345

Query: 601 LRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMG 660
             PN  T  +L+ A+ R     DA  + + M   GL  ++  Y  LLS C       D+G
Sbjct: 346 FTPNWSTYAALVRAYGRARYGDDALAIYREMKEKGLSLTVILYNTLLSMCA------DIG 399

Query: 661 FCHELMAV 668
           +  E   +
Sbjct: 400 YVDEAFEI 407



 Score = 68.6 bits (166), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 39/171 (22%), Positives = 79/171 (46%)

Query: 500 LVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFA 559
           ++ YN+ + +  K+++ + + KL+ +M   G +PD  T++ ++      G    A   F 
Sbjct: 175 VILYNVTMKVFRKSKDLEKSEKLFDEMLERGIKPDNATFTTIISCARQNGVPKRAVEWFE 234

Query: 560 EMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVG 619
           +M      PD      ++D +G+AGNV  A   Y+       R +  T ++L+  +   G
Sbjct: 235 KMSSFGCEPDNVTMAAMIDAYGRAGNVDMALSLYDRARTEKWRIDAVTFSTLIRIYGVSG 294

Query: 620 QLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGFCHELMAVSG 670
                 ++ + M  LG+KP+L  Y  L+     A+ P+     ++ +  +G
Sbjct: 295 NYDGCLNIYEEMKALGVKPNLVIYNRLIDSMGRAKRPWQAKIIYKDLITNG 345


>gi|297848852|ref|XP_002892307.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein [Arabidopsis
            lyrata subsp. lyrata]
 gi|297338149|gb|EFH68566.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein [Arabidopsis
            lyrata subsp. lyrata]
          Length = 1164

 Score =  155 bits (392), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 87/296 (29%), Positives = 146/296 (49%)

Query: 352  RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
            +Q G K + +TY +++G+L R  +     +   +M+  G  P+ + Y  L+  + +   +
Sbjct: 731  KQKGLKPNSYTYGSIIGLLCRICKLAEAEEAFSEMIGQGILPDTIVYTTLVDGFCKRGDI 790

Query: 412  NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
              A   F +M      PD +TY  +I    + G +  A  ++ +M   GL PD  T++ +
Sbjct: 791  RAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMLCRGLEPDIITFTEL 850

Query: 472  INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF 531
            +N   KAGH++ A ++   M+  GC PN+VTY  +I    K  +  SA +L  +M   G 
Sbjct: 851  MNGYCKAGHIKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGL 910

Query: 532  EPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWE 591
            +P+  TY+ ++  L   G ++EA  +  E        D   Y  L+D + K+G + KA E
Sbjct: 911  QPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQE 970

Query: 592  WYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
                ML  GL+P + T N L++ F   G L D   LL  ML  G+ P+  T+  L+
Sbjct: 971  ILTEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNCLV 1026



 Score =  150 bits (379), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 93/330 (28%), Positives = 166/330 (50%), Gaps = 11/330 (3%)

Query: 350  LRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRAN 409
            L    G+  D  +Y+T++    R  +   + KL+++M + G +PN  TY  +I    R  
Sbjct: 694  LMELKGYTPDVISYSTVINGYCRFGELDKVWKLIEKMKQKGLKPNSYTYGSIIGLLCRIC 753

Query: 410  YLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYS 469
             L EA + F +M   G  PD + Y TL+D   K G +  A   + +M +  ++PD  TY+
Sbjct: 754  KLAEAEEAFSEMIGQGILPDTIVYTTLVDGFCKRGDIRAASKFFYEMHSRDITPDVLTYT 813

Query: 470  VIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNA 529
             II+   + G +  A +LF EM+ +G  P+++T+  ++    KA + + A +++  M  A
Sbjct: 814  AIISGFCQIGDMVEAGKLFHEMLCRGLEPDIITFTELMNGYCKAGHIKDAFRVHNHMIQA 873

Query: 530  GFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKA 589
            G  P+ VTY+ +++ L   G LD A  +  EM +    P+   Y  +V+   K+GN+ +A
Sbjct: 874  GCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEA 933

Query: 590  WEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSC 649
             +       AGL  +  T  +L+ A+ + G++  A  +L  ML  GL+P++ T+ +L++ 
Sbjct: 934  VKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILTEMLGKGLQPTIVTFNVLMN- 992

Query: 650  CTEARSPYDMGFCHELMAVSGHPAHMFLLS 679
                      GFC   M   G     ++L+
Sbjct: 993  ----------GFCLHGMLEDGEKLLNWMLA 1012



 Score =  148 bits (374), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 79/250 (31%), Positives = 136/250 (54%)

Query: 394 NVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMY 453
           NV +YN +IH   +   +NEA  +   M++ G  PD ++Y T+I+ + + G LD    + 
Sbjct: 668 NVASYNIVIHFVCQLGRINEAHHLLLLMELKGYTPDVISYSTVINGYCRFGELDKVWKLI 727

Query: 454 KKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKA 513
           +KM+  GL P+++TY  II  L +   L  A + F EM+ QG +P+ + Y  ++    K 
Sbjct: 728 EKMKQKGLKPNSYTYGSIIGLLCRICKLAEAEEAFSEMIGQGILPDTIVYTTLVDGFCKR 787

Query: 514 RNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVY 573
            + ++A K + +M +    PD +TY+ ++      G + EA  +F EM  +   PD   +
Sbjct: 788 GDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMLCRGLEPDIITF 847

Query: 574 GLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLN 633
             L++ + KAG+++ A+  +  M+QAG  PNV T  +L+    + G L  A  LL  M  
Sbjct: 848 TELMNGYCKAGHIKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWK 907

Query: 634 LGLKPSLQTY 643
           +GL+P++ TY
Sbjct: 908 IGLQPNIFTY 917



 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 92/316 (29%), Positives = 154/316 (48%)

Query: 355  GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
            G   D   YTT+V    +     A +K   +M      P+V+TY  +I  + +   + EA
Sbjct: 769  GILPDTIVYTTLVDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEA 828

Query: 415  LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
              +F +M   G EPD +T+  L++ + KAG +  A  ++  M  AG SP+  TY+ +I+ 
Sbjct: 829  GKLFHEMLCRGLEPDIITFTELMNGYCKAGHIKDAFRVHNHMIQAGCSPNVVTYTTLIDG 888

Query: 475  LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPD 534
            L K G L +A++L  EM   G  PN+ TYN ++    K+ N + A+KL  + + AG   D
Sbjct: 889  LCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNAD 948

Query: 535  KVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYE 594
             VTY+ +M+     G +D+A+ +  EM  K   P    + +L++ +   G +    +   
Sbjct: 949  TVTYTTLMDAYCKSGEMDKAQEILTEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLN 1008

Query: 595  AMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEAR 654
             ML  G+ PN  T N L+  +     L  A  + + M + G++P  +TY  L+     AR
Sbjct: 1009 WMLAKGIAPNATTFNCLVKQYCIRNNLKAATAIYKDMCSRGVEPDGKTYENLVKGHCNAR 1068

Query: 655  SPYDMGFCHELMAVSG 670
            +  +  F  + M   G
Sbjct: 1069 NMKEAWFLFQEMKGKG 1084



 Score =  142 bits (358), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 87/306 (28%), Positives = 148/306 (48%), Gaps = 6/306 (1%)

Query: 359  DEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVF 418
            D  TYT ++    +        KL  +M+  G +P+++T+  L++ Y +A ++ +A  V 
Sbjct: 808  DVLTYTAIISGFCQIGDMVEAGKLFHEMLCRGLEPDIITFTELMNGYCKAGHIKDAFRVH 867

Query: 419  KQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKA 478
              M   GC P+ VTY TLID   K G LD A ++  +M   GL P+ FTY+ I+N L K+
Sbjct: 868  NHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKS 927

Query: 479  GHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTY 538
            G+++ A +L  E    G   + VTY  ++    K+     A ++  +M   G +P  VT+
Sbjct: 928  GNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILTEMLGKGLQPTIVTF 987

Query: 539  SIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQ 598
            +++M      G L++ E +   M  K   P+   +  LV  +    N++ A   Y+ M  
Sbjct: 988  NVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNCLVKQYCIRNNLKAATAIYKDMCS 1047

Query: 599  AGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSC------CTE 652
             G+ P+  T  +L+        + +A+ L Q M   G   S+ TY++L+          E
Sbjct: 1048 RGVEPDGKTYENLVKGHCNARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFFKRKKFVE 1107

Query: 653  ARSPYD 658
            AR  +D
Sbjct: 1108 AREIFD 1113



 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 77/251 (30%), Positives = 133/251 (52%), Gaps = 4/251 (1%)

Query: 353  QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
            QAG   +  TYTT++  L +     + N+LL +M + G QPN+ TYN +++   ++  + 
Sbjct: 872  QAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIE 931

Query: 413  EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
            EA+ +  + +  G   D VTY TL+D + K+G +D A ++  +M   GL P   T++V++
Sbjct: 932  EAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILTEMLGKGLQPTIVTFNVLM 991

Query: 473  NCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFE 532
            N     G L+   +L   M+ +G  PN  T+N ++       N ++A  +Y+DM + G E
Sbjct: 992  NGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNCLVKQYCIRNNLKAATAIYKDMCSRGVE 1051

Query: 533  PDKVTYSIVMEVLGHCGY--LDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAW 590
            PD  TY  +++  GHC    + EA  +F EM+ K +      Y +L+  + K     +A 
Sbjct: 1052 PDGKTYENLVK--GHCNARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFFKRKKFVEAR 1109

Query: 591  EWYEAMLQAGL 601
            E ++ M + GL
Sbjct: 1110 EIFDQMRRDGL 1120



 Score =  130 bits (327), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 79/276 (28%), Positives = 143/276 (51%), Gaps = 3/276 (1%)

Query: 375 QFGAINK---LLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRV 431
           Q G IN+   LL  M   G  P+V++Y+ +I+ Y R   L++   + ++M+  G +P+  
Sbjct: 681 QLGRINEAHHLLLLMELKGYTPDVISYSTVINGYCRFGELDKVWKLIEKMKQKGLKPNSY 740

Query: 432 TYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEM 491
           TY ++I +  +   L  A + + +M   G+ PDT  Y+ +++   K G ++AA + F EM
Sbjct: 741 TYGSIIGLLCRICKLAEAEEAFSEMIGQGILPDTIVYTTLVDGFCKRGDIRAASKFFYEM 800

Query: 492 VNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYL 551
            ++   P+++TY  +I+   +  +   A KL+ +M   G EPD +T++ +M      G++
Sbjct: 801 HSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMLCRGLEPDIITFTELMNGYCKAGHI 860

Query: 552 DEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSL 611
            +A  V   M +    P+   Y  L+D   K G++  A E    M + GL+PN+ T NS+
Sbjct: 861 KDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSI 920

Query: 612 LSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
           ++   + G + +A  L+      GL     TYT L+
Sbjct: 921 VNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLM 956



 Score =  112 bits (281), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 100/427 (23%), Positives = 181/427 (42%), Gaps = 25/427 (5%)

Query: 368  GILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGR-ANYLNEALDVFKQMQVVGC 426
            G+L  AR      K+ ++M+  G   +V + N  +    +  N    A+ VF++   VG 
Sbjct: 612  GMLPEAR------KVFEKMLNYGLVLSVDSCNVYLARLSKDCNKTATAIIVFREFPEVGV 665

Query: 427  EPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQ 486
              +  +Y  +I    + G ++ A  +   M+  G +PD  +YS +IN   + G L    +
Sbjct: 666  CWNVASYNIVIHFVCQLGRINEAHHLLLLMELKGYTPDVISYSTVINGYCRFGELDKVWK 725

Query: 487  LFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLG 546
            L  +M  +G  PN  TY  +I L  +      A + + +M   G  PD + Y+ +++   
Sbjct: 726  LIEKMKQKGLKPNSYTYGSIIGLLCRICKLAEAEEAFSEMIGQGILPDTIVYTTLVDGFC 785

Query: 547  HCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVP 606
              G +  A   F EM  ++  PD   Y  ++  + + G++ +A + +  ML  GL P++ 
Sbjct: 786  KRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMLCRGLEPDII 845

Query: 607  TCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS-CCTEARSPYDMGFCHEL 665
            T   L++ + + G + DA+ +   M+  G  P++ TYT L+   C E          HE+
Sbjct: 846  TFTELMNGYCKAGHIKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEM 905

Query: 666  MAVSGHPAHMFLLSMPSPGPDGQNVRDH---VGSFLEMMHSEDRESKRGLVDAVVDFLHK 722
              +   P      S+ +      N+ +    VG F     + D  +   L+DA      K
Sbjct: 906  WKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYC----K 961

Query: 723  SGLKEEAGSVWEVAAQKNVYPDAVKEKGMSYWLINLHVMSDGTAVIALSRTLAWFRKQML 782
            SG  ++A  +      K + P  V    +        ++ DG       + L W    ML
Sbjct: 962  SGEMDKAQEILTEMLGKGLQPTIVTFNVLMNGFCLHGMLEDG------EKLLNW----ML 1011

Query: 783  ISGVGPS 789
              G+ P+
Sbjct: 1012 AKGIAPN 1018



 Score = 80.1 bits (196), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 48/185 (25%), Positives = 89/185 (48%)

Query: 354  AGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNE 413
            AG   D  TYTT++    ++ +     ++L +M+  G QP +VT+N L++ +     L +
Sbjct: 943  AGLNADTVTYTTLMDAYCKSGEMDKAQEILTEMLGKGLQPTIVTFNVLMNGFCLHGMLED 1002

Query: 414  ALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIIN 473
               +   M   G  P+  T+  L+  +     L  A  +YK M + G+ PD  TY  ++ 
Sbjct: 1003 GEKLLNWMLAKGIAPNATTFNCLVKQYCIRNNLKAATAIYKDMCSRGVEPDGKTYENLVK 1062

Query: 474  CLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEP 533
                A +++ A  LF EM  +G   ++ TY+++I    K + +  A +++  M+  G   
Sbjct: 1063 GHCNARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFFKRKKFVEAREIFDQMRRDGLAA 1122

Query: 534  DKVTY 538
            DK  +
Sbjct: 1123 DKEIF 1127


>gi|302799124|ref|XP_002981321.1| hypothetical protein SELMODRAFT_114398 [Selaginella moellendorffii]
 gi|300150861|gb|EFJ17509.1| hypothetical protein SELMODRAFT_114398 [Selaginella moellendorffii]
          Length = 457

 Score =  155 bits (392), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 89/305 (29%), Positives = 159/305 (52%), Gaps = 1/305 (0%)

Query: 334 LKQLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQP 393
           L Q Q    A   F  +  Q G   +  +Y+ ++  L R ++     +LL++M+  G QP
Sbjct: 62  LCQAQRFEEARSVFRGMAAQ-GCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQP 120

Query: 394 NVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMY 453
           NVVTY  L+    +   L EA+D+F +M   GC PD V Y  LID  +K G +  A  ++
Sbjct: 121 NVVTYGSLLSGLCKMGKLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLF 180

Query: 454 KKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKA 513
           ++M   G  P  FTY+ +++   + G       LF +M+ QGC+PN+ T+N ++    K 
Sbjct: 181 EEMLEKGCIPTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKM 240

Query: 514 RNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVY 573
            +   A +L+ +M++ G  PD V+Y+ ++  +   G   EA+ +  EM R    PD   Y
Sbjct: 241 GDMVEAHRLFLEMRSLGCPPDVVSYNTLIRGMCSKGKPHEAQRLLREMIRSGVGPDIVSY 300

Query: 574 GLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLN 633
            +L+D + K+G +  A + +  + ++GL P+  + ++++    R G++  A+ + + M+ 
Sbjct: 301 NILIDGYSKSGALDHAIKLFYEIPKSGLEPDAFSYSTIIDCLCRAGKVGAAFVVFKDMIA 360

Query: 634 LGLKP 638
            G  P
Sbjct: 361 NGSAP 365



 Score =  149 bits (375), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 85/304 (27%), Positives = 150/304 (49%)

Query: 344 LGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIH 403
           + FF W   Q  + H   +Y  ++ +L ++ +   +    + M+  GC PN  TY  L+ 
Sbjct: 1   MAFFQWAGSQVHYNHGTLSYNYLLEVLAKSGRCDHVYGTYNDMLAAGCVPNTYTYGYLLR 60

Query: 404 SYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSP 463
           S  +A    EA  VF+ M   GC P+  +Y  LI    +   +D A ++  +M   G  P
Sbjct: 61  SLCQAQRFEEARSVFRGMAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQP 120

Query: 464 DTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLY 523
           +  TY  +++ L K G L+ A  LF  MV +GC P+ V YN++I   +K  +   A +L+
Sbjct: 121 NVVTYGSLLSGLCKMGKLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLF 180

Query: 524 RDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKA 583
            +M   G  P   TY+ ++      G     +++F +M R+  VP+   +  L+D + K 
Sbjct: 181 EEMLEKGCIPTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKM 240

Query: 584 GNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTY 643
           G++ +A   +  M   G  P+V + N+L+      G+  +A  LL+ M+  G+ P + +Y
Sbjct: 241 GDMVEAHRLFLEMRSLGCPPDVVSYNTLIRGMCSKGKPHEAQRLLREMIRSGVGPDIVSY 300

Query: 644 TLLL 647
            +L+
Sbjct: 301 NILI 304



 Score =  148 bits (373), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 86/300 (28%), Positives = 152/300 (50%)

Query: 354 AGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNE 413
           AG   + +TY  ++  L +A++F     +   M   GC PNV +Y+ LI    R   ++E
Sbjct: 46  AGCVPNTYTYGYLLRSLCQAQRFEEARSVFRGMAAQGCSPNVFSYSILIAGLCRGQKVDE 105

Query: 414 ALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIIN 473
           A ++  +M   G +P+ VTY +L+    K G L  A+D++ +M   G  PD   Y+V+I+
Sbjct: 106 AAELLNEMIDGGHQPNVVTYGSLLSGLCKMGKLKEAVDLFSRMVYRGCPPDGVVYNVLID 165

Query: 474 CLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEP 533
              K G +  A++LF EM+ +GCIP + TYN +++  ++   +     L++DM   G  P
Sbjct: 166 GFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVP 225

Query: 534 DKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWY 593
           +  T++ +++     G + EA  +F EMR     PD   Y  L+      G   +A    
Sbjct: 226 NIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLGCPPDVVSYNTLIRGMCSKGKPHEAQRLL 285

Query: 594 EAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEA 653
             M+++G+ P++ + N L+  + + G L  A  L   +   GL+P   +Y+ ++ C   A
Sbjct: 286 REMIRSGVGPDIVSYNILIDGYSKSGALDHAIKLFYEIPKSGLEPDAFSYSTIIDCLCRA 345



 Score =  137 bits (344), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 77/293 (26%), Positives = 137/293 (46%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           G   D   Y  ++    +    G   +L ++M+  GC P V TYN L+  + R       
Sbjct: 152 GCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNSLLSGFSRKGEFGRV 211

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
             +FK M   GC P+  T+  L+D   K G +  A  ++ +M++ G  PD  +Y+ +I  
Sbjct: 212 QSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLGCPPDVVSYNTLIRG 271

Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPD 534
           +   G    A +L  EM+  G  P++V+YNI+I   +K+     A+KL+ ++  +G EPD
Sbjct: 272 MCSKGKPHEAQRLLREMIRSGVGPDIVSYNILIDGYSKSGALDHAIKLFYEIPKSGLEPD 331

Query: 535 KVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYE 594
             +YS +++ L   G +  A  VF +M      PD  V   LV    +   + ++ E ++
Sbjct: 332 AFSYSTIIDCLCRAGKVGAAFVVFKDMIANGSAPDAAVVIPLVIGLCRGERLTESCELFQ 391

Query: 595 AMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
           AM++    P +P  N L+    +  +  D   +   +   G  P ++   ++L
Sbjct: 392 AMVKFECVPLIPEYNLLMYKLCKAKRSDDVCEIFHELTERGFSPDVEISKVIL 444



 Score =  130 bits (326), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 89/351 (25%), Positives = 160/351 (45%), Gaps = 2/351 (0%)

Query: 396 VTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKK 455
           ++YN L+    ++   +     +  M   GC P+  TY  L+    +A   + A  +++ 
Sbjct: 18  LSYNYLLEVLAKSGRCDHVYGTYNDMLAAGCVPNTYTYGYLLRSLCQAQRFEEARSVFRG 77

Query: 456 MQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARN 515
           M A G SP+ F+YS++I  L +   +  A +L  EM++ G  PN+VTY  +++   K   
Sbjct: 78  MAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMGK 137

Query: 516 YQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGL 575
            + A+ L+  M   G  PD V Y+++++     G + EA  +F EM  K  +P    Y  
Sbjct: 138 LKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNS 197

Query: 576 LVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLG 635
           L+  + + G   +    ++ ML+ G  PN+ T N+LL  F ++G + +A+ L   M +LG
Sbjct: 198 LLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLG 257

Query: 636 LKPSLQTY-TLLLSCCTEARSPYDMGFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHV 694
             P + +Y TL+   C++ + P++       M  SG    +   ++   G       DH 
Sbjct: 258 CPPDVVSYNTLIRGMCSKGK-PHEAQRLLREMIRSGVGPDIVSYNILIDGYSKSGALDHA 316

Query: 695 GSFLEMMHSEDRESKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDA 745
                 +     E        ++D L ++G    A  V++        PDA
Sbjct: 317 IKLFYEIPKSGLEPDAFSYSTIIDCLCRAGKVGAAFVVFKDMIANGSAPDA 367



 Score =  123 bits (309), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 75/258 (29%), Positives = 126/258 (48%), Gaps = 4/258 (1%)

Query: 362 TYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQM 421
           TY +++    R  +FG +  L   M+R GC PN+ T+N L+  + +   + EA  +F +M
Sbjct: 194 TYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEM 253

Query: 422 QVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHL 481
           + +GC PD V+Y TLI      G    A  + ++M  +G+ PD  +Y+++I+   K+G L
Sbjct: 254 RSLGCPPDVVSYNTLIRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNILIDGYSKSGAL 313

Query: 482 QAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIV 541
             A +LF E+   G  P+  +Y+ +I    +A    +A  +++DM   G  PD     ++
Sbjct: 314 DHAIKLFYEIPKSGLEPDAFSYSTIIDCLCRAGKVGAAFVVFKDMIANGSAPDAAV--VI 371

Query: 542 MEVLGHC--GYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQA 599
             V+G C    L E+  +F  M +   VP  P Y LL+    KA       E +  + + 
Sbjct: 372 PLVIGLCRGERLTESCELFQAMVKFECVPLIPEYNLLMYKLCKAKRSDDVCEIFHELTER 431

Query: 600 GLRPNVPTCNSLLSAFLR 617
           G  P+V     +L    R
Sbjct: 432 GFSPDVEISKVILETLRR 449



 Score =  103 bits (258), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 60/205 (29%), Positives = 105/205 (51%), Gaps = 2/205 (0%)

Query: 352 RQAGFKHDEHTYTTMV-GILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANY 410
           R  G   D  +Y T++ G+  + +   A  +LL +M+R G  P++V+YN LI  Y ++  
Sbjct: 254 RSLGCPPDVVSYNTLIRGMCSKGKPHEA-QRLLREMIRSGVGPDIVSYNILIDGYSKSGA 312

Query: 411 LNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSV 470
           L+ A+ +F ++   G EPD  +Y T+ID   +AG +  A  ++K M A G +PD      
Sbjct: 313 LDHAIKLFYEIPKSGLEPDAFSYSTIIDCLCRAGKVGAAFVVFKDMIANGSAPDAAVVIP 372

Query: 471 IINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAG 530
           ++  L +   L  + +LF  MV   C+P +  YN+++    KA+      +++ ++   G
Sbjct: 373 LVIGLCRGERLTESCELFQAMVKFECVPLIPEYNLLMYKLCKAKRSDDVCEIFHELTERG 432

Query: 531 FEPDKVTYSIVMEVLGHCGYLDEAE 555
           F PD     +++E L      D AE
Sbjct: 433 FSPDVEISKVILETLRRSDDKDAAE 457



 Score =  102 bits (253), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 97/403 (24%), Positives = 166/403 (41%), Gaps = 80/403 (19%)

Query: 465 TFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYR 524
           T +Y+ ++  L K+G     +  + +M+  GC+PN  TY  ++    +A+ ++ A  ++R
Sbjct: 17  TLSYNYLLEVLAKSGRCDHVYGTYNDMLAAGCVPNTYTYGYLLRSLCQAQRFEEARSVFR 76

Query: 525 -----------------------------------DMQNAGFEPDKVTYSIVMEVLGHCG 549
                                              +M + G +P+ VTY  ++  L   G
Sbjct: 77  GMAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMG 136

Query: 550 YLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCN 609
            L EA  +F+ M  +   PD  VY +L+D + K G++ +A+  +E ML+ G  P V T N
Sbjct: 137 KLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYN 196

Query: 610 SLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGFCHELMAVS 669
           SLLS F R G+      L + ML  G  P++ T+  LL            GFC     V 
Sbjct: 197 SLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLD-----------GFCKMGDMVE 245

Query: 670 GHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDR--ESKRGLVDAV----------- 716
            H   + + S+  P PD  +      + +  M S+ +  E++R L + +           
Sbjct: 246 AHRLFLEMRSLGCP-PDVVSYN----TLIRGMCSKGKPHEAQRLLREMIRSGVGPDIVSY 300

Query: 717 ---VDFLHKSGLKEEAGSVWEVAAQKNVYPDAVKEKGMSYWLINLHVMSDGTAVIALSRT 773
              +D   KSG  + A  ++    +  + PDA     +   L     +  G A +     
Sbjct: 301 NILIDGYSKSGALDHAIKLFYEIPKSGLEPDAFSYSTIIDCLCRAGKV--GAAFVVF--- 355

Query: 774 LAWFRKQMLISGVGPSR---IDIVTGWGRRSRVTGTSLVRQAV 813
                K M+ +G  P     I +V G  R  R+T +  + QA+
Sbjct: 356 -----KDMIANGSAPDAAVVIPLVIGLCRGERLTESCELFQAM 393


>gi|255552099|ref|XP_002517094.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223543729|gb|EEF45257.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 549

 Score =  155 bits (392), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 99/369 (26%), Positives = 189/369 (51%), Gaps = 8/369 (2%)

Query: 291 FASTGNVVESVSRILRQWKWGPLAE---EALGNTNYSMDAYQANQVLKQL-QDHTVALGF 346
           F +  + ++ VS IL+  K  P  +   +AL +   +      +Q+L +   D   ALG 
Sbjct: 94  FHAQVSDIDRVSEILK--KHYPCTDSVVQALNDCGVNPTNNLISQLLNRFCNDWVPALGL 151

Query: 347 FNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYG 406
           F W + Q G+ H    Y  MV ILGR ++F  + +L+ +M       ++VT  +++    
Sbjct: 152 FTWAKHQTGYVHPPDLYDLMVDILGRRKKFSFMWELVKEMENLEGYVSLVTMKKVMRRLA 211

Query: 407 RANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTF 466
           RA    +A++ F+ ++ +G   D      L+D   K G ++ A   + + + + +  D  
Sbjct: 212 RAGNFQDAVEAFRGIEKLGVRKDIEALNVLMDALVKEGSVEHAYSAFMEFKDS-IHVDFQ 270

Query: 467 TYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDM 526
           +++++++   KA  L  A ++  EM  QG  PN+V+Y   I L  K +++++   ++ +M
Sbjct: 271 SFNILLHGYCKARKLDDARKIMDEMDKQGFQPNVVSYTCFIELYCKLKDFRNVEAIFSEM 330

Query: 527 QNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNV 586
           Q    +P+ +TY+I M  LG    +++A  V+  M+    VPD   Y  L+ +  ++G +
Sbjct: 331 QEKSCKPNVITYTIFMHALGKAKQVNKALEVYEMMKSNCCVPDASFYSSLIFVLTQSGRL 390

Query: 587 RKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLL 646
           + AW+ +E M + G+ P++ T N+++++     +  +A  LL+ M     KP +QTY  L
Sbjct: 391 KDAWDVFEDMKKQGVSPDLLTYNTMITSACTHLEEENALKLLRRMEEDSCKPDIQTYAPL 450

Query: 647 LS-CCTEAR 654
           L  CC + R
Sbjct: 451 LKMCCRKKR 459



 Score =  126 bits (317), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 90/344 (26%), Positives = 160/344 (46%), Gaps = 11/344 (3%)

Query: 289 RHFASTGNVVESVSRILRQWKWGPLAEEALGNTNYSMDAYQANQVLKQLQDHTVALGFFN 348
           R  A  GN  ++V       K G    + +   N  MDA         +++ +V   +  
Sbjct: 208 RRLARAGNFQDAVEAFRGIEKLG--VRKDIEALNVLMDAL--------VKEGSVEHAYSA 257

Query: 349 WLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRA 408
           ++  +     D  ++  ++    +AR+     K++D+M + G QPNVV+Y   I  Y + 
Sbjct: 258 FMEFKDSIHVDFQSFNILLHGYCKARKLDDARKIMDEMDKQGFQPNVVSYTCFIELYCKL 317

Query: 409 NYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTY 468
                   +F +MQ   C+P+ +TY   +    KA  ++ A+++Y+ M++    PD   Y
Sbjct: 318 KDFRNVEAIFSEMQEKSCKPNVITYTIFMHALGKAKQVNKALEVYEMMKSNCCVPDASFY 377

Query: 469 SVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQN 528
           S +I  L ++G L+ A  +F +M  QG  P+L+TYN MI         ++ALKL R M+ 
Sbjct: 378 SSLIFVLTQSGRLKDAWDVFEDMKKQGVSPDLLTYNTMITSACTHLEEENALKLLRRMEE 437

Query: 529 AGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRK 588
              +PD  TY+ ++++      +   + +   M + N   D   Y LLV    K+G +  
Sbjct: 438 DSCKPDIQTYAPLLKMCCRKKRIKVLKFLLNHMFKNNISIDLGTYVLLVGGLCKSGKLEL 497

Query: 589 AWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGML 632
           A  ++E M+  GL P   T   L+   L    L++A   +Q ++
Sbjct: 498 ACSFFEEMVMKGLIPRDRTYKMLVEE-LEQNNLTEAKEKIQKLM 540


>gi|297816676|ref|XP_002876221.1| hypothetical protein ARALYDRAFT_906766 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297322059|gb|EFH52480.1| hypothetical protein ARALYDRAFT_906766 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 754

 Score =  155 bits (392), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 93/313 (29%), Positives = 158/313 (50%), Gaps = 1/313 (0%)

Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLI 402
           AL F   +  Q GF  D++T+ T+V  L +A       +++D M+++G  P+V TYN +I
Sbjct: 278 ALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVI 337

Query: 403 HSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLS 462
               +   + EA++   QM    C P+ VTY TLI    K   ++ A ++ + + + G+ 
Sbjct: 338 SGLCKLGEVKEAVEFLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGIL 397

Query: 463 PDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKL 522
           PD  T++ +I  L    + + A +LF EM ++GC P+  TYN++I           AL +
Sbjct: 398 PDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNM 457

Query: 523 YRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGK 582
            + M+ +G     +TY+ +++       + EAE +F EM       +   Y  L+D   K
Sbjct: 458 LKQMELSGCARSVITYNTLIDGFCKANKIREAEEIFDEMEVHGVSRNSVTYNTLIDGLCK 517

Query: 583 AGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQT 642
           +  V  A +  + M+  G +P+  T NSLL+ F R G +  A  ++Q M + G +P + T
Sbjct: 518 SRRVEDASQLMDQMIMEGQKPDKFTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVT 577

Query: 643 Y-TLLLSCCTEAR 654
           Y TL+   C   R
Sbjct: 578 YGTLISGLCKAGR 590



 Score =  139 bits (349), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 98/346 (28%), Positives = 168/346 (48%), Gaps = 7/346 (2%)

Query: 355 GFKHDEHTYTT-MVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNE 413
           G   DE T+TT M G +      GA+ ++ +QMV  GC  + V+ N ++H + +   + +
Sbjct: 219 GLVPDEKTFTTIMQGYIEEGDLDGAL-RIREQMVEFGCSWSNVSVNVIVHGFCKEGRVED 277

Query: 414 ALDVFKQM-QVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
           AL+  ++M    G  PD+ T+ TL++   KAG +  A+++   M   G  PD +TY+ +I
Sbjct: 278 ALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVI 337

Query: 473 NCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFE 532
           + L K G ++ A +   +M+ + C PN VTYN +I+   K    + A +L R + + G  
Sbjct: 338 SGLCKLGEVKEAVEFLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGIL 397

Query: 533 PDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEW 592
           PD  T++ +++ L        A  +F EMR K   PDE  Y +L+D     G + +A   
Sbjct: 398 PDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNM 457

Query: 593 YEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTE 652
            + M  +G   +V T N+L+  F +  ++ +A  +   M   G+  +  TY  L+    +
Sbjct: 458 LKQMELSGCARSVITYNTLIDGFCKANKIREAEEIFDEMEVHGVSRNSVTYNTLIDGLCK 517

Query: 653 ARSPYDMGFCHELMAVSGHPAHMF----LLSMPSPGPDGQNVRDHV 694
           +R   D     + M + G     F    LL+    G D +   D V
Sbjct: 518 SRRVEDASQLMDQMIMEGQKPDKFTYNSLLTHFCRGGDIKKAADIV 563



 Score =  137 bits (344), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 89/315 (28%), Positives = 143/315 (45%), Gaps = 35/315 (11%)

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
           Q G+  D +TY +++  L +  +     + LDQM+   C PN VTYN LI +  + N + 
Sbjct: 323 QEGYDPDVYTYNSVISGLCKLGEVKEAVEFLDQMITRDCSPNTVTYNTLISTLCKENQVE 382

Query: 413 EA-----------------------------------LDVFKQMQVVGCEPDRVTYCTLI 437
           EA                                   +++F++M+  GCEPD  TY  LI
Sbjct: 383 EATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLI 442

Query: 438 DIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCI 497
           D     G LD A++M K+M+ +G +    TY+ +I+   KA  ++ A ++F EM   G  
Sbjct: 443 DSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKIREAEEIFDEMEVHGVS 502

Query: 498 PNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAV 557
            N VTYN +I    K+R  + A +L   M   G +PDK TY+ ++      G + +A  +
Sbjct: 503 RNSVTYNTLIDGLCKSRRVEDASQLMDQMIMEGQKPDKFTYNSLLTHFCRGGDIKKAADI 562

Query: 558 FAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLR 617
              M      PD   YG L+    KAG V  A +   ++   G+       N ++    R
Sbjct: 563 VQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGIALTPHAYNPVIQGLFR 622

Query: 618 VGQLSDAYHLLQGML 632
             + ++A +L + ML
Sbjct: 623 KRKTTEAINLFREML 637



 Score =  132 bits (332), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 90/305 (29%), Positives = 148/305 (48%), Gaps = 19/305 (6%)

Query: 338 QDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVT 397
           ++H VA+  F  +R + G + DE TY  ++  L    +      +L QM   GC  +V+T
Sbjct: 414 RNHRVAMELFEEMRSK-GCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVIT 472

Query: 398 YNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQ 457
           YN LI  + +AN + EA ++F +M+V G   + VTY TLID   K+  ++ A  +  +M 
Sbjct: 473 YNTLIDGFCKANKIREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDASQLMDQMI 532

Query: 458 AAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQ 517
             G  PD FTY+ ++    + G ++ A  +   M + GC P++VTY  +I+   KA   +
Sbjct: 533 MEGQKPDKFTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVE 592

Query: 518 SALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKN-WVPDEPVYGLL 576
            A KL R +Q  G       Y+ V++ L       EA  +F EM  +N   PD   Y ++
Sbjct: 593 VASKLLRSIQMKGIALTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAAPDAVSYRIV 652

Query: 577 V-DLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLG 635
              L    G +R+A ++   +L+ G  P                + S  Y L +G+L L 
Sbjct: 653 FRGLCNGGGPIREAVDFLVELLEKGFVP----------------EFSSLYMLAEGLLTLS 696

Query: 636 LKPSL 640
           ++ +L
Sbjct: 697 MEETL 701



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 86/322 (26%), Positives = 155/322 (48%), Gaps = 3/322 (0%)

Query: 334 LKQLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQP 393
           L+   D + AL  FN   ++  F  +   Y  ++  LGR+  F  + K+L+ M   GC+ 
Sbjct: 57  LRSQADDSAALRLFNLASKKPNFSPEPALYEEILLRLGRSGSFDDMRKILEDMKNSGCEM 116

Query: 394 NVVTYNRLIHSYGRANYLNEALDVFKQM-QVVGCEPDRVTYCTLIDIHAKAGFLDVAMDM 452
               +  LI SY +    +E L V   M    G +PD   Y  ++++      L +    
Sbjct: 117 GTSPFLILIESYAQFELQDEILGVVHWMIDDFGLKPDTHFYNRMLNLLVDGNNLKLVEIA 176

Query: 453 YKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAK 512
           + KM   G+ PD  T++V+I  L +A  L+ A  +  +M + G +P+  T+  ++    +
Sbjct: 177 HAKMSVWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTIMQGYIE 236

Query: 513 ARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKN-WVPDEP 571
             +   AL++   M   G     V+ ++++      G +++A     EM  ++ + PD+ 
Sbjct: 237 EGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQY 296

Query: 572 VYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGM 631
            +  LV+   KAG+V+ A E  + MLQ G  P+V T NS++S   ++G++ +A   L  M
Sbjct: 297 TFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEFLDQM 356

Query: 632 LNLGLKPSLQTY-TLLLSCCTE 652
           +     P+  TY TL+ + C E
Sbjct: 357 ITRDCSPNTVTYNTLISTLCKE 378


>gi|224107985|ref|XP_002314678.1| predicted protein [Populus trichocarpa]
 gi|222863718|gb|EEF00849.1| predicted protein [Populus trichocarpa]
          Length = 497

 Score =  155 bits (391), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 88/327 (26%), Positives = 170/327 (51%), Gaps = 2/327 (0%)

Query: 330 ANQVLKQLQDH-TVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVR 388
            +Q+L +   H  VA G F W + Q  + H    Y  M+ ILG+ ++F  +  L++QM  
Sbjct: 91  VSQILMRFDSHCVVAFGVFIWAKNQTSYVHTPELYDYMIDILGKFKKFSLMWSLVEQMKG 150

Query: 389 DGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDV 448
                ++ T ++++    +A    +A+DVF+ ++  G   DR     L+D   K G ++ 
Sbjct: 151 LNGYVSLATASKVMRRLAKARKYKDAIDVFRGIEKYGASKDREALNVLMDALVKEGDVED 210

Query: 449 AMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIA 508
           A   + + +   ++ D+ +++++I+   KA     A ++  EM   G  P++V+Y+  IA
Sbjct: 211 AHSAFLEFKDC-ITLDSSSFNILIHGYCKARMFVVARKIMEEMEKHGFHPDVVSYSCFIA 269

Query: 509 LQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVP 568
              + +++++   ++ +MQ  G +P+ +TY+ VM  LG    L+EA  V+ +M+R   +P
Sbjct: 270 AYCEQKDFRNVEAVFDEMQEKGCKPNVITYTTVMHALGKARQLNEALEVYEKMKRNGCLP 329

Query: 569 DEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLL 628
           D   Y  L+ +  ++G ++ AW+ +E M + G+  N+   N+++S+     Q   A  LL
Sbjct: 330 DSKFYSSLIYVLSQSGRIKDAWDVFEDMEKQGVCRNLWVYNTMISSACAHSQGGSALKLL 389

Query: 629 QGMLNLGLKPSLQTYTLLLSCCTEARS 655
           + M     KP ++TY  LL  C   +S
Sbjct: 390 ERMEGDSCKPDVKTYAPLLKMCCRRKS 416



 Score =  122 bits (305), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 73/254 (28%), Positives = 131/254 (51%)

Query: 359 DEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVF 418
           D  ++  ++    +AR F    K++++M + G  P+VV+Y+  I +Y           VF
Sbjct: 225 DSSSFNILIHGYCKARMFVVARKIMEEMEKHGFHPDVVSYSCFIAAYCEQKDFRNVEAVF 284

Query: 419 KQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKA 478
            +MQ  GC+P+ +TY T++    KA  L+ A+++Y+KM+  G  PD+  YS +I  L ++
Sbjct: 285 DEMQEKGCKPNVITYTTVMHALGKARQLNEALEVYEKMKRNGCLPDSKFYSSLIYVLSQS 344

Query: 479 GHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTY 538
           G ++ A  +F +M  QG   NL  YN MI+         SALKL   M+    +PD  TY
Sbjct: 345 GRIKDAWDVFEDMEKQGVCRNLWVYNTMISSACAHSQGGSALKLLERMEGDSCKPDVKTY 404

Query: 539 SIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQ 598
           + ++++      +   + + + M + N   D   Y LLV+ + + G +  A  +++  + 
Sbjct: 405 APLLKMCCRRKSIKLLKFLLSHMFKNNVSVDLGTYTLLVNEFCRNGKLEHACFYFQEAVL 464

Query: 599 AGLRPNVPTCNSLL 612
            G+ P V T  +L+
Sbjct: 465 KGMVPMVKTFKALV 478



 Score =  105 bits (261), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 60/224 (26%), Positives = 112/224 (50%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           GF  D  +Y+  +      + F  +  + D+M   GC+PNV+TY  ++H+ G+A  LNEA
Sbjct: 256 GFHPDVVSYSCFIAAYCEQKDFRNVEAVFDEMQEKGCKPNVITYTTVMHALGKARQLNEA 315

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
           L+V+++M+  GC PD   Y +LI + +++G +  A D+++ M+  G+  + + Y+ +I+ 
Sbjct: 316 LEVYEKMKRNGCLPDSKFYSSLIYVLSQSGRIKDAWDVFEDMEKQGVCRNLWVYNTMISS 375

Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPD 534
                   +A +L   M    C P++ TY  ++ +  + ++ +    L   M       D
Sbjct: 376 ACAHSQGGSALKLLERMEGDSCKPDVKTYAPLLKMCCRRKSIKLLKFLLSHMFKNNVSVD 435

Query: 535 KVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVD 578
             TY++++      G L+ A   F E   K  VP    +  LV+
Sbjct: 436 LGTYTLLVNEFCRNGKLEHACFYFQEAVLKGMVPMVKTFKALVE 479



 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 46/191 (24%), Positives = 86/191 (45%), Gaps = 35/191 (18%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           ++ G K +  TYTT++  LG+ARQ     ++ ++M R+GC P+   Y+ LI+   ++  +
Sbjct: 288 QEKGCKPNVITYTTVMHALGKARQLNEALEVYEKMKRNGCLPDSKFYSSLIYVLSQSGRI 347

Query: 412 NEALDVFKQMQVVG-----------------------------------CEPDRVTYCTL 436
            +A DVF+ M+  G                                   C+PD  TY  L
Sbjct: 348 KDAWDVFEDMEKQGVCRNLWVYNTMISSACAHSQGGSALKLLERMEGDSCKPDVKTYAPL 407

Query: 437 IDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGC 496
           + +  +   + +   +   M    +S D  TY++++N   + G L+ A   F E V +G 
Sbjct: 408 LKMCCRRKSIKLLKFLLSHMFKNNVSVDLGTYTLLVNEFCRNGKLEHACFYFQEAVLKGM 467

Query: 497 IPNLVTYNIMI 507
           +P + T+  ++
Sbjct: 468 VPMVKTFKALV 478



 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 48/209 (22%), Positives = 96/209 (45%), Gaps = 3/209 (1%)

Query: 462 SPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALK 521
           +P+ + Y  +I+ LGK         L  +M       +L T + ++   AKAR Y+ A+ 
Sbjct: 121 TPELYDY--MIDILGKFKKFSLMWSLVEQMKGLNGYVSLATASKVMRRLAKARKYKDAID 178

Query: 522 LYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWG 581
           ++R ++  G   D+   +++M+ L   G +++A + F E +      D   + +L+  + 
Sbjct: 179 VFRGIEKYGASKDREALNVLMDALVKEGDVEDAHSAFLEFK-DCITLDSSSFNILIHGYC 237

Query: 582 KAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQ 641
           KA     A +  E M + G  P+V + +  ++A+       +   +   M   G KP++ 
Sbjct: 238 KARMFVVARKIMEEMEKHGFHPDVVSYSCFIAAYCEQKDFRNVEAVFDEMQEKGCKPNVI 297

Query: 642 TYTLLLSCCTEARSPYDMGFCHELMAVSG 670
           TYT ++    +AR   +    +E M  +G
Sbjct: 298 TYTTVMHALGKARQLNEALEVYEKMKRNG 326


>gi|224130398|ref|XP_002320827.1| predicted protein [Populus trichocarpa]
 gi|222861600|gb|EEE99142.1| predicted protein [Populus trichocarpa]
          Length = 775

 Score =  155 bits (391), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 92/306 (30%), Positives = 155/306 (50%), Gaps = 12/306 (3%)

Query: 370 LGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQ------- 422
           L R   F  +N+L+++MV    QPNVVT+  LI+   +   +++AL+V ++M        
Sbjct: 315 LAREGNFNRMNELMEKMVEMDIQPNVVTFGILINHMCKFRRVDDALEVLEKMSGGKESGG 374

Query: 423 -VVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQA-AGLSPDTFTYSVIINCLGKAGH 480
             V  EPD V Y TLID   K G     + + ++M++  G +PDT TY+ +I+   KAG 
Sbjct: 375 ISVSVEPDVVIYNTLIDGLCKVGRQQEGLGLMERMRSQKGCAPDTITYNCLIDGFCKAGE 434

Query: 481 LQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSI 540
           ++   +LF EM  +G  PN+VT N ++    +     SA+  + + Q  G + D VTY+ 
Sbjct: 435 IEKGKELFDEMNKEGVAPNVVTVNTLVGGMCRTGRVSSAVNFFVEAQRRGMKGDAVTYTA 494

Query: 541 VMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAG 600
           ++    +    ++A  +F EM +    PD  VY  L+  + +AG +  A      + + G
Sbjct: 495 LINAFCNVNNFEKAMELFNEMLKSGCSPDAIVYYTLISGFSQAGRMADASFVLAELKKLG 554

Query: 601 LRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMG 660
           +RP+    N+L+  F R  +    + +L+ M   GLKP   TY  L++    A    D+ 
Sbjct: 555 IRPDTVCYNTLIGGFCRTNKFHRVFEMLKEMEEAGLKPDTITYNTLIA---YASKNGDLK 611

Query: 661 FCHELM 666
           F  ++M
Sbjct: 612 FAQKVM 617



 Score =  145 bits (366), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 83/302 (27%), Positives = 147/302 (48%), Gaps = 1/302 (0%)

Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLI 402
            LG    +R Q G   D  TY  ++    +A +     +L D+M ++G  PNVVT N L+
Sbjct: 402 GLGLMERMRSQKGCAPDTITYNCLIDGFCKAGEIEKGKELFDEMNKEGVAPNVVTVNTLV 461

Query: 403 HSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLS 462
               R   ++ A++ F + Q  G + D VTY  LI+        + AM+++ +M  +G S
Sbjct: 462 GGMCRTGRVSSAVNFFVEAQRRGMKGDAVTYTALINAFCNVNNFEKAMELFNEMLKSGCS 521

Query: 463 PDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKL 522
           PD   Y  +I+   +AG +  A  +  E+   G  P+ V YN +I    +   +    ++
Sbjct: 522 PDAIVYYTLISGFSQAGRMADASFVLAELKKLGIRPDTVCYNTLIGGFCRTNKFHRVFEM 581

Query: 523 YRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGK 582
            ++M+ AG +PD +TY+ ++      G L  A+ V  +M +   VP    YG +++ +  
Sbjct: 582 LKEMEEAGLKPDTITYNTLIAYASKNGDLKFAQKVMRKMIKAGVVPTVATYGAVINAYCL 641

Query: 583 AGNVRKAWEWYEAMLQAG-LRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQ 641
            GN  +A E ++ M  A  + PN    N L+++  +  ++  A  L++ M   G+ P+  
Sbjct: 642 NGNGNEAMEIFKDMKAASKVPPNTVIYNILINSLCKNNKVKSAVSLMEDMKIWGVTPNTT 701

Query: 642 TY 643
           TY
Sbjct: 702 TY 703



 Score =  115 bits (287), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 89/343 (25%), Positives = 153/343 (44%), Gaps = 35/343 (10%)

Query: 330 ANQVLKQLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRD 389
            N VLK   +H V +  F W+ R             ++  L R R+      L  +M++ 
Sbjct: 255 VNLVLK-FGEHGVLISSF-WMGR-------------LITRLCRNRKTNRGWDLFTEMIKL 299

Query: 390 GCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVA 449
           G        N L+    R    N   ++ ++M  +  +P+ VT+  LI+   K   +D A
Sbjct: 300 GAVLESAACNSLLTGLAREGNFNRMNELMEKMVEMDIQPNVVTFGILINHMCKFRRVDDA 359

Query: 450 MDMYKKM----QAAGLS----PDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQ-GCIPNL 500
           +++ +KM    ++ G+S    PD   Y+ +I+ L K G  Q    L   M +Q GC P+ 
Sbjct: 360 LEVLEKMSGGKESGGISVSVEPDVVIYNTLIDGLCKVGRQQEGLGLMERMRSQKGCAPDT 419

Query: 501 VTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAE 560
           +TYN +I    KA   +   +L+ +M   G  P+ VT + ++  +   G +  A   F E
Sbjct: 420 ITYNCLIDGFCKAGEIEKGKELFDEMNKEGVAPNVVTVNTLVGGMCRTGRVSSAVNFFVE 479

Query: 561 MRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQ 620
            +R+    D   Y  L++ +    N  KA E +  ML++G  P+     +L+S F + G+
Sbjct: 480 AQRRGMKGDAVTYTALINAFCNVNNFEKAMELFNEMLKSGCSPDAIVYYTLISGFSQAGR 539

Query: 621 LSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGFCH 663
           ++DA  +L  +  LG++P    Y  L+            GFC 
Sbjct: 540 MADASFVLAELKKLGIRPDTVCYNTLIG-----------GFCR 571



 Score = 94.7 bits (234), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 57/209 (27%), Positives = 100/209 (47%), Gaps = 1/209 (0%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           ++ G + D   Y T++G   R  +F  + ++L +M   G +P+ +TYN LI    +   L
Sbjct: 551 KKLGIRPDTVCYNTLIGGFCRTNKFHRVFEMLKEMEEAGLKPDTITYNTLIAYASKNGDL 610

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAG-LSPDTFTYSV 470
             A  V ++M   G  P   TY  +I+ +   G  + AM+++K M+AA  + P+T  Y++
Sbjct: 611 KFAQKVMRKMIKAGVVPTVATYGAVINAYCLNGNGNEAMEIFKDMKAASKVPPNTVIYNI 670

Query: 471 IINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAG 530
           +IN L K   +++A  L  +M   G  PN  TYN +       ++ +   +    M    
Sbjct: 671 LINSLCKNNKVKSAVSLMEDMKIWGVTPNTTTYNAIFKGLRDEKDLEKVFEFMDRMIEHA 730

Query: 531 FEPDKVTYSIVMEVLGHCGYLDEAEAVFA 559
             PD +T  I+ E L   G ++  +   A
Sbjct: 731 CNPDYITMEILTEWLSAVGEIERLKKFVA 759



 Score = 76.3 bits (186), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 61/246 (24%), Positives = 97/246 (39%), Gaps = 44/246 (17%)

Query: 447 DVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCI--------- 497
           D  +++  K    G+   +F    +I  L +         LF EM+  G +         
Sbjct: 252 DEIVNLVLKFGEHGVLISSFWMGRLITRLCRNRKTNRGWDLFTEMIKLGAVLESAACNSL 311

Query: 498 --------------------------PNLVTYNIMIALQAKARNYQSALKLYRDMQ---- 527
                                     PN+VT+ I+I    K R    AL++   M     
Sbjct: 312 LTGLAREGNFNRMNELMEKMVEMDIQPNVVTFGILINHMCKFRRVDDALEVLEKMSGGKE 371

Query: 528 ----NAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMR-RKNWVPDEPVYGLLVDLWGK 582
               +   EPD V Y+ +++ L   G   E   +   MR +K   PD   Y  L+D + K
Sbjct: 372 SGGISVSVEPDVVIYNTLIDGLCKVGRQQEGLGLMERMRSQKGCAPDTITYNCLIDGFCK 431

Query: 583 AGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQT 642
           AG + K  E ++ M + G+ PNV T N+L+    R G++S A +        G+K    T
Sbjct: 432 AGEIEKGKELFDEMNKEGVAPNVVTVNTLVGGMCRTGRVSSAVNFFVEAQRRGMKGDAVT 491

Query: 643 YTLLLS 648
           YT L++
Sbjct: 492 YTALIN 497



 Score = 42.0 bits (97), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 38/210 (18%), Positives = 90/210 (42%), Gaps = 18/210 (8%)

Query: 452 MYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQA 511
           +YK  +   +       S ++   G++  ++ +  LF ++     + N    N+ +++  
Sbjct: 144 LYKTSKELNIPLTVNAASFLLRASGRSELVEESLILFNDL--DPSVKNTYLRNVWLSILL 201

Query: 512 KARNYQSALKLYRDM----QNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWV 567
           ++   + ALK+  +M     ++   P+  T  I+   L      +  E + +E    N V
Sbjct: 202 RSGRVKDALKVIDEMFESNDDSNCRPNDATGDILFSFLLK---RERNEELLSEDEIVNLV 258

Query: 568 PDEPVYGLLVD-LW--------GKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRV 618
                +G+L+   W         +     + W+ +  M++ G       CNSLL+   R 
Sbjct: 259 LKFGEHGVLISSFWMGRLITRLCRNRKTNRGWDLFTEMIKLGAVLESAACNSLLTGLARE 318

Query: 619 GQLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
           G  +    L++ M+ + ++P++ T+ +L++
Sbjct: 319 GNFNRMNELMEKMVEMDIQPNVVTFGILIN 348


>gi|12583808|gb|AAG59660.1|AC084319_18 putative membrane-associated salt-inducible protein [Oryza sativa
           Japonica Group]
          Length = 772

 Score =  155 bits (391), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 98/334 (29%), Positives = 159/334 (47%), Gaps = 2/334 (0%)

Query: 316 EALGNTNYSMDAYQANQVLKQLQDHTVALGFFNWLRRQA--GFKHDEHTYTTMVGILGRA 373
           EA+     ++D    N VL  + +          LR+ A  G + D  +Y  ++  L  A
Sbjct: 170 EAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMA 229

Query: 374 RQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTY 433
           +++G + +L+D+MVR  C PN+VT+N LI    R        +V  QM   GC PD   Y
Sbjct: 230 KRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMY 289

Query: 434 CTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVN 493
            T+ID   K G L+VA ++  +M + GL P+   Y+ ++  L  A   + A +L  EM  
Sbjct: 290 ATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQ 349

Query: 494 QGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDE 553
           + C  + VT+NI++    +       ++L   M + G  PD +TY+ V+      G +DE
Sbjct: 350 KDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDE 409

Query: 554 AEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLS 613
           A  +   M      P+   Y +++     AG    A E    M+Q G  PN  T N+L++
Sbjct: 410 AVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLIN 469

Query: 614 AFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
              + G +  A  LL+ ML  G  P L +Y+ ++
Sbjct: 470 FLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVI 503



 Score =  149 bits (376), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 82/293 (27%), Positives = 150/293 (51%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           G K +   Y T++  L  A ++    +LL +M +  C  + VT+N L+  + +   ++  
Sbjct: 316 GLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRV 375

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
           +++ +QM   GC PD +TY T+I+   K G +D A+ + K M + G  P+T +Y++++  
Sbjct: 376 IELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKG 435

Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPD 534
           L  AG    A +L  +M+ QGC PN VT+N +I    K    + A++L + M   G  PD
Sbjct: 436 LCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPD 495

Query: 535 KVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYE 594
            ++YS V++ LG  G  +EA  +   M  K   P+  +Y  +     + G V K  + ++
Sbjct: 496 LISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQMFD 555

Query: 595 AMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
            +    +R +    N+++S+  +  +   A      M++ G  P+  TYT+L+
Sbjct: 556 NIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTMLI 608



 Score =  134 bits (338), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 82/320 (25%), Positives = 147/320 (45%), Gaps = 14/320 (4%)

Query: 329 QANQVLKQLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVR 388
           + ++VL Q+ +H              G   D   Y T++  + +       N++L++M  
Sbjct: 269 RVHEVLAQMSEH--------------GCTPDIRMYATIIDGICKEGHLEVANEILNRMPS 314

Query: 389 DGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDV 448
            G +PNVV YN ++     A    EA ++  +M    C  D VT+  L+D   + G +D 
Sbjct: 315 YGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDR 374

Query: 449 AMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIA 508
            +++ ++M + G  PD  TY+ +IN   K G +  A  L   M + GC PN V+Y I++ 
Sbjct: 375 VIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLK 434

Query: 509 LQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVP 568
               A  +  A +L   M   G  P+ VT++ ++  L   G +++A  +  +M      P
Sbjct: 435 GLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSP 494

Query: 569 DEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLL 628
           D   Y  ++D  GKAG   +A E    M+  G+ PN    +S+  A  R G+++    + 
Sbjct: 495 DLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQMF 554

Query: 629 QGMLNLGLKPSLQTYTLLLS 648
             + +  ++     Y  ++S
Sbjct: 555 DNIKDTTIRSDAVLYNAVIS 574



 Score =  126 bits (316), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 73/277 (26%), Positives = 136/277 (49%)

Query: 359 DEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVF 418
           D+ T+  +V    +      + +LL+QM+  GC P+V+TY  +I+ + +   ++EA+ + 
Sbjct: 355 DDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLL 414

Query: 419 KQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKA 478
           K M   GC+P+ V+Y  ++     AG    A ++  +M   G  P+  T++ +IN L K 
Sbjct: 415 KSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKK 474

Query: 479 GHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTY 538
           G ++ A +L  +M+  GC P+L++Y+ +I    KA   + AL+L   M N G  P+ + Y
Sbjct: 475 GLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIY 534

Query: 539 SIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQ 598
           S +   L   G +++   +F  ++      D  +Y  ++    K     +A +++  M+ 
Sbjct: 535 SSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVS 594

Query: 599 AGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLG 635
            G  PN  T   L+      G   +A  LL  + + G
Sbjct: 595 NGCMPNESTYTMLIKGLASEGLAKEAQELLSELCSRG 631



 Score =  119 bits (298), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 68/267 (25%), Positives = 130/267 (48%)

Query: 382 LLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHA 441
           LL ++   GC+ ++V+YN ++     A    +  ++  +M  V C P+ VT+ TLI    
Sbjct: 203 LLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLC 262

Query: 442 KAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLV 501
           + G  +   ++  +M   G +PD   Y+ II+ + K GHL+ A+++   M + G  PN+V
Sbjct: 263 RNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVV 322

Query: 502 TYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEM 561
            YN ++     A  ++ A +L  +M       D VT++I+++     G +D    +  +M
Sbjct: 323 CYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQM 382

Query: 562 RRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQL 621
                +PD   Y  +++ + K G + +A    ++M   G +PN  +   +L      G+ 
Sbjct: 383 LSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRW 442

Query: 622 SDAYHLLQGMLNLGLKPSLQTYTLLLS 648
            DA  L+  M+  G  P+  T+  L++
Sbjct: 443 VDAEELMSQMIQQGCPPNPVTFNTLIN 469



 Score =  117 bits (293), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 96/424 (22%), Positives = 178/424 (41%), Gaps = 37/424 (8%)

Query: 359 DEHTYTTMV-GILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDV 417
           + +T+  +V G+  R R   A+ ++LD+M   GC P    Y+ ++ +  R+     ++ V
Sbjct: 110 NAYTFFPVVRGLCTRGRIADAL-EVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRV 168

Query: 418 FKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGK 477
            + M   GC  D      +++   + G +D A+ + +K+   G   D  +Y+ ++  L  
Sbjct: 169 LEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCM 228

Query: 478 AGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVT 537
           A       +L  EMV   C PN+VT+N +I    +   ++   ++   M   G  PD   
Sbjct: 229 AKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRM 288

Query: 538 YSIVMEVLGHCGYLD-----------------------------------EAEAVFAEMR 562
           Y+ +++ +   G+L+                                   EAE + +EM 
Sbjct: 289 YATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMF 348

Query: 563 RKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLS 622
           +K+   D+  + +LVD + + G V +  E  E ML  G  P+V T  ++++ F + G + 
Sbjct: 349 QKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLID 408

Query: 623 DAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGFCHELMAVSGHPAHMFLLSMPS 682
           +A  LL+ M + G KP+  +YT++L     A    D       M   G P +    +   
Sbjct: 409 EAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLI 468

Query: 683 PGPDGQNVRDHVGSFLEMMHSEDRESKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVY 742
                + + +     L+ M              V+D L K+G  EEA  +  V   K + 
Sbjct: 469 NFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGIS 528

Query: 743 PDAV 746
           P+ +
Sbjct: 529 PNTI 532



 Score =  111 bits (277), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 63/208 (30%), Positives = 112/208 (53%)

Query: 354 AGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNE 413
            G K +  +YT ++  L  A ++    +L+ QM++ GC PN VT+N LI+   +   + +
Sbjct: 420 CGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQ 479

Query: 414 ALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIIN 473
           A+++ KQM V GC PD ++Y T+ID   KAG  + A+++   M   G+SP+T  YS I  
Sbjct: 480 AIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIAC 539

Query: 474 CLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEP 533
            L + G +    Q+F  + +     + V YN +I+   K      A+  +  M + G  P
Sbjct: 540 ALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGCMP 599

Query: 534 DKVTYSIVMEVLGHCGYLDEAEAVFAEM 561
           ++ TY+++++ L   G   EA+ + +E+
Sbjct: 600 NESTYTMLIKGLASEGLAKEAQELLSEL 627



 Score = 95.9 bits (237), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 99/463 (21%), Positives = 178/463 (38%), Gaps = 76/463 (16%)

Query: 393 PNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDM 452
           PN  T+  ++        + +AL+V  +M   GC P    Y  +++   ++G    ++ +
Sbjct: 109 PNAYTFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRV 168

Query: 453 YKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAK 512
            + M A G + DT   ++++N + + G +  A  L  ++   GC  ++V+YN ++     
Sbjct: 169 LEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCM 228

Query: 513 ARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPV 572
           A+ +    +L  +M      P+ VT++ ++  L   G  +    V A+M      PD  +
Sbjct: 229 AKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRM 288

Query: 573 YGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSA------------------ 614
           Y  ++D   K G++  A E    M   GL+PNV   N++L                    
Sbjct: 289 YATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMF 348

Query: 615 -----------------FLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPY 657
                            F + G +     LL+ ML+ G  P + TYT +++         
Sbjct: 349 QKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVIN--------- 399

Query: 658 DMGFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHV--------GSFLEMMHSEDRESK 709
             GFC E +      A M L SM S G     V   +        G +++      +  +
Sbjct: 400 --GFCKEGLI---DEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQ 454

Query: 710 RGL------VDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAVKEKGMSYWLINLHVMSD 763
           +G        + +++FL K GL E+A  + +        PD          LI+   + D
Sbjct: 455 QGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPD----------LISYSTVID 504

Query: 764 GTAVIALSRTLAWFRKQMLISGVGPSRI---DIVTGWGRRSRV 803
           G      +         M+  G+ P+ I    I     R  RV
Sbjct: 505 GLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREGRV 547



 Score = 79.0 bits (193), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 45/178 (25%), Positives = 87/178 (48%)

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
           Q G   +  T+ T++  L +        +LL QM+ +GC P++++Y+ +I   G+A    
Sbjct: 454 QQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTE 513

Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
           EAL++   M   G  P+ + Y ++    ++ G ++  + M+  ++   +  D   Y+ +I
Sbjct: 514 EALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVI 573

Query: 473 NCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAG 530
           + L K      A   F  MV+ GC+PN  TY ++I   A     + A +L  ++ + G
Sbjct: 574 SSLCKRWETDRAIDFFAYMVSNGCMPNESTYTMLIKGLASEGLAKEAQELLSELCSRG 631


>gi|4038037|gb|AAC97219.1| hypothetical protein [Arabidopsis thaliana]
          Length = 1107

 Score =  155 bits (391), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 97/392 (24%), Positives = 185/392 (47%), Gaps = 1/392 (0%)

Query: 354 AGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNE 413
           AG +    TY  M+  + +     A   L ++M   G  P+ VTYN +I  +G+   L++
Sbjct: 124 AGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDD 183

Query: 414 ALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIIN 473
            +  F++M+ + CEPD +TY  LI+   K G L + ++ Y++M+  GL P+  +YS +++
Sbjct: 184 TVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVD 243

Query: 474 CLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEP 533
              K G +Q A + + +M   G +PN  TY  +I    K  N   A +L  +M   G E 
Sbjct: 244 AFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEW 303

Query: 534 DKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWY 593
           + VTY+ +++ L     + EAE +F +M     +P+   Y  L+  + KA N+ +A E  
Sbjct: 304 NVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELL 363

Query: 594 EAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEA 653
             +   G++P++    + +     + ++  A  ++  M   G+K +   YT L+    ++
Sbjct: 364 NELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKS 423

Query: 654 RSPYD-MGFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRESKRGL 712
            +P + +    E+  +      +    +       + V   V  F  + +    ++   +
Sbjct: 424 GNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAI 483

Query: 713 VDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPD 744
             A++D L K    E A +++E   QK + PD
Sbjct: 484 FTAMIDGLCKDNQVEAATTLFEQMVQKGLVPD 515



 Score =  150 bits (378), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 97/314 (30%), Positives = 151/314 (48%), Gaps = 15/314 (4%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMV---------------RDGCQPNVVTYN 399
           GFKH   +Y  +  IL  AR +   N +L +MV               R+ C P    ++
Sbjct: 5   GFKHSVESYCIVAHILFCARMYYDANSVLKEMVLSKADCDVFDVLWSTRNVCVPGFGVFD 64

Query: 400 RLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAA 459
            L         L EA+  F +M+     P   +   L+   AK G  D     +K M  A
Sbjct: 65  ALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFFKDMIGA 124

Query: 460 GLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSA 519
           G  P  FTY+++I+C+ K G ++AA  LF EM  +G +P+ VTYN MI    K       
Sbjct: 125 GARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDT 184

Query: 520 LKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDL 579
           +  + +M++   EPD +TY+ ++      G L      + EM+     P+   Y  LVD 
Sbjct: 185 VCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDA 244

Query: 580 WGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPS 639
           + K G +++A ++Y  M + GL PN  T  SL+ A  ++G LSDA+ L   ML +G++ +
Sbjct: 245 FCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWN 304

Query: 640 LQTYTLLLSCCTEA 653
           + TYT L+    +A
Sbjct: 305 VVTYTALIDGLCDA 318



 Score =  149 bits (375), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 97/335 (28%), Positives = 159/335 (47%), Gaps = 13/335 (3%)

Query: 328 YQANQVLKQLQDHTVALGFFN--WLRRQA---GFKHDEHTYTTMV--GILGRARQFGAIN 380
           Y AN VLK++         F+  W  R     GF   +  ++ ++  G+L  A Q     
Sbjct: 27  YDANSVLKEMVLSKADCDVFDVLWSTRNVCVPGFGVFDALFSVLIDLGMLEEAIQ----- 81

Query: 381 KLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIH 440
               +M R    P   + N L+H + +    ++    FK M   G  P   TY  +ID  
Sbjct: 82  -CFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFFKDMIGAGARPTVFTYNIMIDCM 140

Query: 441 AKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNL 500
            K G ++ A  ++++M+  GL PDT TY+ +I+  GK G L      F EM +  C P++
Sbjct: 141 CKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDV 200

Query: 501 VTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAE 560
           +TYN +I    K       L+ YR+M+  G +P+ V+YS +++     G + +A   + +
Sbjct: 201 ITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVD 260

Query: 561 MRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQ 620
           MRR   VP+E  Y  L+D   K GN+  A+     MLQ G+  NV T  +L+       +
Sbjct: 261 MRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAER 320

Query: 621 LSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARS 655
           + +A  L   M   G+ P+L +Y  L+    +A++
Sbjct: 321 MKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKN 355



 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 85/288 (29%), Positives = 143/288 (49%), Gaps = 4/288 (1%)

Query: 368 GILGRARQFGA---INKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVV 424
           G+L R  + G    + +    M+  G +P V TYN +I    +   +  A  +F++M+  
Sbjct: 100 GLLHRFAKLGKTDDVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFR 159

Query: 425 GCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAA 484
           G  PD VTY ++ID   K G LD  +  +++M+     PD  TY+ +INC  K G L   
Sbjct: 160 GLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIG 219

Query: 485 HQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEV 544
            + + EM   G  PN+V+Y+ ++    K    Q A+K Y DM+  G  P++ TY+ +++ 
Sbjct: 220 LEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDA 279

Query: 545 LGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPN 604
               G L +A  +  EM +     +   Y  L+D    A  +++A E +  M  AG+ PN
Sbjct: 280 NCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPN 339

Query: 605 VPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTY-TLLLSCCT 651
           + + N+L+  F++   +  A  LL  +   G+KP L  Y T +   C+
Sbjct: 340 LASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCS 387



 Score =  115 bits (288), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 90/360 (25%), Positives = 163/360 (45%), Gaps = 13/360 (3%)

Query: 325 MDAYQANQVLKQLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLD 384
           +DA+    +++Q      A+ F+  +RR  G   +E+TYT+++    +        +L +
Sbjct: 242 VDAFCKEGMMQQ------AIKFYVDMRR-VGLVPNEYTYTSLIDANCKIGNLSDAFRLGN 294

Query: 385 QMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAG 444
           +M++ G + NVVTY  LI     A  + EA ++F +M   G  P+  +Y  LI    KA 
Sbjct: 295 EMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAK 354

Query: 445 FLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYN 504
            +D A+++  +++  G+ PD   Y   I  L     ++AA  +  EM   G   N + Y 
Sbjct: 355 NMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYT 414

Query: 505 IMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRK 564
            ++    K+ N    L L  +M+    E   VT+ ++++ L     + +A   F  +   
Sbjct: 415 TLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISND 474

Query: 565 NWV-PDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSD 623
             +  +  ++  ++D   K   V  A   +E M+Q GL P+     SL+    + G + +
Sbjct: 475 FGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLE 534

Query: 624 AYHLLQGMLNLGLKPSLQTYTLL---LSCCTEARSPYDMGFCHELMAVSGHPAHMFLLSM 680
           A  L   M  +G+K  L  YT L   LS C + +      F  E++    HP  +  +S+
Sbjct: 535 ALALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKA--RSFLEEMIGEGIHPDEVLCISV 592



 Score = 60.5 bits (145), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 48/204 (23%), Positives = 92/204 (45%), Gaps = 1/204 (0%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           ++ G K +   YTT++    ++        LLD+M     +  VVT+  LI    +   +
Sbjct: 402 KECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLV 461

Query: 412 NEALDVFKQM-QVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSV 470
           ++A+D F ++    G + +   +  +ID   K   ++ A  ++++M   GL PD   Y+ 
Sbjct: 462 SKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTS 521

Query: 471 IINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAG 530
           +++   K G++  A  L  +M   G   +L+ Y  ++   +     Q A     +M   G
Sbjct: 522 LMDGNFKQGNVLEALALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEG 581

Query: 531 FEPDKVTYSIVMEVLGHCGYLDEA 554
             PD+V    V++     G +DEA
Sbjct: 582 IHPDEVLCISVLKKHYELGCIDEA 605



 Score = 54.3 bits (129), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 43/167 (25%), Positives = 75/167 (44%), Gaps = 10/167 (5%)

Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLI 402
           A+ +FN +    G + +   +T M+  L +  Q  A   L +QMV+ G  P+   Y  L+
Sbjct: 464 AVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLM 523

Query: 403 HSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLS 462
               +   + EAL +  +M  +G + D + Y +L+   +    L  A    ++M   G+ 
Sbjct: 524 DGNFKQGNVLEALALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIH 583

Query: 463 PD-TFTYSVI-----INCLGKAGHLQA---AHQLFCEMVNQGCIPNL 500
           PD     SV+     + C+ +A  LQ+    HQL     N   +PN+
Sbjct: 584 PDEVLCISVLKKHYELGCIDEAVELQSYLMKHQLLTS-DNDNALPNI 629


>gi|326525088|dbj|BAK07814.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 539

 Score =  155 bits (391), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 89/258 (34%), Positives = 141/258 (54%), Gaps = 5/258 (1%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           +QAG   + +TYT+++  + RA Q     +LL QM+  GC PN  T+N ++ ++ +A   
Sbjct: 271 QQAGIMPNVYTYTSVIDAMYRAGQVPRAQELLCQMMETGCPPNTATFNAIMRAHVKAGRS 330

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGF--LDVAMDMYKKMQAAGLSPDTFTYS 469
            + L V  QM+ +GC+PD +TY  L++ H   G   LD AM +  KM A G  PD  T++
Sbjct: 331 EQVLQVHNQMRQLGCDPDIITYNFLMETHCGKGQSNLDAAMKVLAKMIAKGCIPDCHTFN 390

Query: 470 VIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNA 529
            ++  +   G+++AA +L+  M    C PN+VTYN+++ L  K ++    L++ +DM   
Sbjct: 391 PMLKLVLGTGNVEAARRLYERMQELQCKPNVVTYNLLMKLFNKEKSMDMVLRIKKDMDAQ 450

Query: 530 GFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEM-RRKNWVPDEPVYGLLVDLWGKAGNVRK 588
           G EP+  TY  ++E     G    A A   EM   K+  P +PVY +++ L  KAG +RK
Sbjct: 451 GVEPNVNTYGALIESFCGRGNWRRAHATLREMVEEKSLKPTKPVYDMVLMLLRKAGQLRK 510

Query: 589 AWEWYEAMLQAGL--RPN 604
             E  E M   G   RP+
Sbjct: 511 HEELVELMADRGFIKRPS 528



 Score =  146 bits (369), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 96/344 (27%), Positives = 155/344 (45%), Gaps = 41/344 (11%)

Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLI 402
           AL FF+ +            Y  M+ +L +   F     LLD+M       +      +I
Sbjct: 122 ALTFFHHVVPSLPADSLPALYAAMIDLLAKHHHFPLARHLLDEMRERSIPVSSQVILAII 181

Query: 403 HSYGRANYLNEALDVFKQMQVVGC-----------------------------------E 427
             Y RA    EA ++F++M+  G                                     
Sbjct: 182 RRYVRAGMSPEASELFRRMEEYGAGVPDPAVLASLLGALSKKRLAGEAQALFDSYKSVFP 241

Query: 428 PDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQL 487
           PD V Y TL+    +AG LD A  ++ +MQ AG+ P+ +TY+ +I+ + +AG +  A +L
Sbjct: 242 PDVVLYTTLVHAWCRAGCLDKAEQVFAEMQQAGIMPNVYTYTSVIDAMYRAGQVPRAQEL 301

Query: 488 FCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGH 547
            C+M+  GC PN  T+N ++    KA   +  L+++  M+  G +PD +TY+ +ME   H
Sbjct: 302 LCQMMETGCPPNTATFNAIMRAHVKAGRSEQVLQVHNQMRQLGCDPDIITYNFLMET--H 359

Query: 548 CGY----LDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRP 603
           CG     LD A  V A+M  K  +PD   +  ++ L    GNV  A   YE M +   +P
Sbjct: 360 CGKGQSNLDAAMKVLAKMIAKGCIPDCHTFNPMLKLVLGTGNVEAARRLYERMQELQCKP 419

Query: 604 NVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
           NV T N L+  F +   +     + + M   G++P++ TY  L+
Sbjct: 420 NVVTYNLLMKLFNKEKSMDMVLRIKKDMDAQGVEPNVNTYGALI 463



 Score =  132 bits (332), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 82/289 (28%), Positives = 144/289 (49%), Gaps = 5/289 (1%)

Query: 356 FKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEAL 415
           F  D   YTT+V    RA       ++  +M + G  PNV TY  +I +  RA  +  A 
Sbjct: 240 FPPDVVLYTTLVHAWCRAGCLDKAEQVFAEMQQAGIMPNVYTYTSVIDAMYRAGQVPRAQ 299

Query: 416 DVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII--N 473
           ++  QM   GC P+  T+  ++  H KAG  +  + ++ +M+  G  PD  TY+ ++  +
Sbjct: 300 ELLCQMMETGCPPNTATFNAIMRAHVKAGRSEQVLQVHNQMRQLGCDPDIITYNFLMETH 359

Query: 474 CLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEP 533
           C     +L AA ++  +M+ +GCIP+  T+N M+ L     N ++A +LY  MQ    +P
Sbjct: 360 CGKGQSNLDAAMKVLAKMIAKGCIPDCHTFNPMLKLVLGTGNVEAARRLYERMQELQCKP 419

Query: 534 DKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWY 593
           + VTY+++M++      +D    +  +M  +   P+   YG L++ +   GN R+A    
Sbjct: 420 NVVTYNLLMKLFNKEKSMDMVLRIKKDMDAQGVEPNVNTYGALIESFCGRGNWRRAHATL 479

Query: 594 EAML-QAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGL--KPS 639
             M+ +  L+P  P  + +L    + GQL     L++ M + G   +PS
Sbjct: 480 REMVEEKSLKPTKPVYDMVLMLLRKAGQLRKHEELVELMADRGFIKRPS 528



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 57/190 (30%), Positives = 93/190 (48%), Gaps = 8/190 (4%)

Query: 468 YSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIAL---QAKARNYQSALKLYR 524
           Y+ +I+ L K  H   A  L  EM  +  IP  V+  +++A+     +A     A +L+R
Sbjct: 142 YAAMIDLLAKHHHFPLARHLLDEM-RERSIP--VSSQVILAIIRRYVRAGMSPEASELFR 198

Query: 525 DMQNAGF-EPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKA 583
            M+  G   PD    + ++  L       EA+A+F +  +  + PD  +Y  LV  W +A
Sbjct: 199 RMEEYGAGVPDPAVLASLLGALSKKRLAGEAQALF-DSYKSVFPPDVVLYTTLVHAWCRA 257

Query: 584 GNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTY 643
           G + KA + +  M QAG+ PNV T  S++ A  R GQ+  A  LL  M+  G  P+  T+
Sbjct: 258 GCLDKAEQVFAEMQQAGIMPNVYTYTSVIDAMYRAGQVPRAQELLCQMMETGCPPNTATF 317

Query: 644 TLLLSCCTEA 653
             ++    +A
Sbjct: 318 NAIMRAHVKA 327


>gi|15226907|ref|NP_181058.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75100538|sp|O82178.1|PP186_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g35130
 gi|3668091|gb|AAC61823.1| hypothetical protein [Arabidopsis thaliana]
 gi|330253974|gb|AEC09068.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 591

 Score =  155 bits (391), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 92/355 (25%), Positives = 179/355 (50%), Gaps = 4/355 (1%)

Query: 297 VVESVSRILRQWKWGPLAEEALGNTNYSMDAYQANQVLKQLQDHTVALGFFNWLRRQAGF 356
           ++E    +L + +   ++ + +G T Y  +AY    ++K+  +   A+  F  ++R    
Sbjct: 205 LIERAEVVLVEMQNHHVSPKTIGVTVY--NAY-IEGLMKRKGNTEEAIDVFQRMKRDRC- 260

Query: 357 KHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALD 416
           K    TY  M+ + G+A +     KL  +M    C+PN+ TY  L++++ R     +A +
Sbjct: 261 KPTTETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEE 320

Query: 417 VFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLG 476
           +F+Q+Q  G EPD   Y  L++ +++AG+   A +++  MQ  G  PD  +Y+++++  G
Sbjct: 321 IFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYG 380

Query: 477 KAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKV 536
           +AG    A  +F EM   G  P + ++ ++++  +KAR+      + ++M   G EPD  
Sbjct: 381 RAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTF 440

Query: 537 TYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAM 596
             + ++ + G  G   + E + AEM       D   Y +L++++GKAG + +  E +  +
Sbjct: 441 VLNSMLNLYGRLGQFTKMEKILAEMENGPCTADISTYNILINIYGKAGFLERIEELFVEL 500

Query: 597 LQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCT 651
            +   RP+V T  S + A+ R         + + M++ G  P   T  +LLS C+
Sbjct: 501 KEKNFRPDVVTWTSRIGAYSRKKLYVKCLEVFEEMIDSGCAPDGGTAKVLLSACS 555



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 76/270 (28%), Positives = 135/270 (50%)

Query: 362 TYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQM 421
           TYT +V    R        ++ +Q+  DG +P+V  YN L+ SY RA Y   A ++F  M
Sbjct: 301 TYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLM 360

Query: 422 QVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHL 481
           Q +GCEPDR +Y  ++D + +AG    A  ++++M+  G++P   ++ ++++   KA  +
Sbjct: 361 QHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDV 420

Query: 482 QAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIV 541
                +  EM   G  P+    N M+ L  +   +    K+  +M+N     D  TY+I+
Sbjct: 421 TKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTADISTYNIL 480

Query: 542 MEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGL 601
           + + G  G+L+  E +F E++ KN+ PD   +   +  + +     K  E +E M+ +G 
Sbjct: 481 INIYGKAGFLERIEELFVELKEKNFRPDVVTWTSRIGAYSRKKLYVKCLEVFEEMIDSGC 540

Query: 602 RPNVPTCNSLLSAFLRVGQLSDAYHLLQGM 631
            P+  T   LLSA     Q+     +L+ M
Sbjct: 541 APDGGTAKVLLSACSSEEQVEQVTSVLRTM 570



 Score =  133 bits (334), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 99/368 (26%), Positives = 174/368 (47%), Gaps = 22/368 (5%)

Query: 392 QPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMD 451
           QP+V+ +N LI +YG+     EA  ++ Q+      P   TY  LI  +  AG ++ A  
Sbjct: 152 QPDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAYCMAGLIERAEV 211

Query: 452 MYKKMQAAGLSPDTFTYSV----IINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMI 507
           +  +MQ   +SP T   +V    I   + + G+ + A  +F  M    C P   TYN+MI
Sbjct: 212 VLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTTETYNLMI 271

Query: 508 ALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWV 567
            L  KA     + KLY +M++   +P+  TY+ ++      G  ++AE +F +++     
Sbjct: 272 NLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGLE 331

Query: 568 PDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHL 627
           PD  VY  L++ + +AG    A E +  M   G  P+  + N ++ A+ R G  SDA  +
Sbjct: 332 PDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAV 391

Query: 628 LQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGFCHEL---MAVSGHPAHMFLLSMPSPG 684
            + M  LG+ P+++++ LLLS  ++AR   D+  C  +   M+ +G     F+L+     
Sbjct: 392 FEEMKRLGIAPTMKSHMLLLSAYSKAR---DVTKCEAIVKEMSENGVEPDTFVLN----- 443

Query: 685 PDGQNVRDHVGSFLEM------MHSEDRESKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQ 738
               N+   +G F +M      M +    +     + +++   K+G  E    ++    +
Sbjct: 444 -SMLNLYGRLGQFTKMEKILAEMENGPCTADISTYNILINIYGKAGFLERIEELFVELKE 502

Query: 739 KNVYPDAV 746
           KN  PD V
Sbjct: 503 KNFRPDVV 510



 Score = 74.3 bits (181), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 40/190 (21%), Positives = 85/190 (44%), Gaps = 1/190 (0%)

Query: 340 HTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYN 399
           H+ A   F  ++R  G      ++  ++    +AR       ++ +M  +G +P+    N
Sbjct: 385 HSDAEAVFEEMKR-LGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLN 443

Query: 400 RLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAA 459
            +++ YGR     +   +  +M+   C  D  TY  LI+I+ KAGFL+   +++ +++  
Sbjct: 444 SMLNLYGRLGQFTKMEKILAEMENGPCTADISTYNILINIYGKAGFLERIEELFVELKEK 503

Query: 460 GLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSA 519
              PD  T++  I    +        ++F EM++ GC P+  T  ++++  +     +  
Sbjct: 504 NFRPDVVTWTSRIGAYSRKKLYVKCLEVFEEMIDSGCAPDGGTAKVLLSACSSEEQVEQV 563

Query: 520 LKLYRDMQNA 529
             + R M   
Sbjct: 564 TSVLRTMHKG 573



 Score = 54.3 bits (129), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 32/136 (23%), Positives = 65/136 (47%), Gaps = 4/136 (2%)

Query: 526 MQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGN 585
           ++ + F+PD + ++++++  G      EAE+++ ++    +VP E  Y LL+  +  AG 
Sbjct: 146 LRKSSFQPDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAYCMAGL 205

Query: 586 VRKAWEWYEAMLQAGLRPN---VPTCNSLLSAFL-RVGQLSDAYHLLQGMLNLGLKPSLQ 641
           + +A      M    + P    V   N+ +   + R G   +A  + Q M     KP+ +
Sbjct: 206 IERAEVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTTE 265

Query: 642 TYTLLLSCCTEARSPY 657
           TY L+++   +A   Y
Sbjct: 266 TYNLMINLYGKASKSY 281


>gi|255557625|ref|XP_002519842.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223540888|gb|EEF42446.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 677

 Score =  155 bits (391), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 121/527 (22%), Positives = 223/527 (42%), Gaps = 15/527 (2%)

Query: 318 LGNTNYSMDAYQANQVLKQLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFG 377
           L    Y +    A  +L  L+    A  FFNW++ Q  F  +   Y   +  L   RQF 
Sbjct: 155 LEQIPYPLTRENALLILNSLRPWQKAHLFFNWIKTQNSFPVETIFYNVTMKSLRFGRQFE 214

Query: 378 AINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLI 437
            I+KL ++MV +  + + +TY+ +I    R N  + AL+ F++M   G  PD VTY  ++
Sbjct: 215 LIDKLANEMVSNEIELDNITYSTIITCAKRCNRFDMALEWFERMYKTGLMPDEVTYSAIL 274

Query: 438 DIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCI 497
           D++AK G ++  + +Y++  A+G  PD  T+SV+    G+AG       +  EM +    
Sbjct: 275 DVYAKLGRVEEVLSLYERGVASGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLAVQ 334

Query: 498 PNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAV 557
           PN+V YN ++    KA     A  L+ +M  +G  P++ T + + ++ G   +  +A  +
Sbjct: 335 PNVVVYNTLLEAMGKAGKPGLARSLFDEMVESGLTPNEKTLTALAKIYGKARWAKDAMEL 394

Query: 558 FAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLR 617
           +  MR  +W  D  +Y  L+ +    G  ++A   +E M ++        C+ +     +
Sbjct: 395 WERMRSNDWPMDFILYNTLLSMCADLGMEKEAETLFEDMKRSE------HCSQI--CLGK 446

Query: 618 VGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGFCHELMAVSGHPAHMFL 677
             ++ D   +    +  G+ P  +    LLS  +      D+      + V+       +
Sbjct: 447 ANRVDDLVRVFNFSMERGVNPDDRLCGCLLSVVSLCEESEDVDKVLACLQVANPKLVALV 506

Query: 678 LSMPSPGPDGQNVRDHVGSFLEMMHSEDRESKRGLVDAVVDFLHKSGLKEEAGSVWEVAA 737
             +       + V++    F  ++     E++R   + ++D      L   A  +  + +
Sbjct: 507 KLIAEEESSFETVKEE---FKAIVSDTAVEARRPFCNCLIDVCRNRNLHGRAHELLYLGS 563

Query: 738 QKNVYPDAVKEKGMSYWLINLHVMSDGTAVIALSRTLAWFRKQMLISGVGPSRIDIVTGW 797
              +YPD +  K    W +++  +S G A  AL   +    K +  +   P      TG 
Sbjct: 564 LYGLYPD-LHNKTEDEWSLDVRSLSVGAAHTALEEWMGTLVKFVQRNEALPEIFSAHTGT 622

Query: 798 GRRSRVTGTSLVRQAVQELLHMFSFPFFTENGNSGCFVGCGEPLNKW 844
           G      G +    A    +   + PF      +GCFV   E L  W
Sbjct: 623 GTHKFSQGLA---NAFASHVEKLAAPFRQSEEKAGCFVATREDLVTW 666


>gi|334182516|ref|NP_172730.3| helicase domain and pentatricopeptide repeat-containing protein
           [Arabidopsis thaliana]
 gi|332190794|gb|AEE28915.1| helicase domain and pentatricopeptide repeat-containing protein
           [Arabidopsis thaliana]
          Length = 735

 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 87/297 (29%), Positives = 158/297 (53%), Gaps = 4/297 (1%)

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
           + G++ D  T+ T++  L    +      L+D+MV +GCQP+VVTYN +++   R+   +
Sbjct: 151 KLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTS 210

Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
            ALD+ ++M+    + D  TY T+ID   + G +D A+ ++K+M+  G+     TY+ ++
Sbjct: 211 LALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLV 270

Query: 473 NCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFE 532
             L KAG       L  +MV++  +PN++T+N+++ +  K    Q A +LY++M   G  
Sbjct: 271 RGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGIS 330

Query: 533 PDKVTYSIVMEVLGHC--GYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAW 590
           P+ +TY+ +M+  G+C    L EA  +   M R    PD   +  L+  +     V    
Sbjct: 331 PNIITYNTLMD--GYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGM 388

Query: 591 EWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
           + +  + + GL  N  T + L+  F + G++  A  L Q M++ G+ P + TY +LL
Sbjct: 389 KVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILL 445



 Score =  136 bits (342), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 81/309 (26%), Positives = 154/309 (49%), Gaps = 11/309 (3%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           G  H+ +T   M+    R  +      +L ++++ G +P+  T+N LI        ++EA
Sbjct: 118 GIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEA 177

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
           + +  +M   GC+PD VTY ++++   ++G   +A+D+ +KM+   +  D FTYS II+ 
Sbjct: 178 VVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDS 237

Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPD 534
           L + G + AA  LF EM  +G   ++VTYN ++    KA  +     L +DM +    P+
Sbjct: 238 LCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPN 297

Query: 535 KVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYE 594
            +T++++++V    G L EA  ++ EM  +   P+   Y  L+D +     + +A    +
Sbjct: 298 VITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLD 357

Query: 595 AMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEAR 654
            M++    P++ T  SL+  +  V ++ D   + + +   GL  +  TY++L+       
Sbjct: 358 LMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQ------ 411

Query: 655 SPYDMGFCH 663
                GFC 
Sbjct: 412 -----GFCQ 415



 Score =  135 bits (341), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 79/317 (24%), Positives = 158/317 (49%), Gaps = 8/317 (2%)

Query: 362 TYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQM 421
           T+  ++ +  +  +    N+L  +M+  G  PN++TYN L+  Y   N L+EA ++   M
Sbjct: 300 TFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLM 359

Query: 422 QVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHL 481
               C PD VT+ +LI  +     +D  M +++ +   GL  +  TYS+++    ++G +
Sbjct: 360 VRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKI 419

Query: 482 QAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIV 541
           + A +LF EMV+ G +P+++TY I++         + AL+++ D+Q +  +   V Y+ +
Sbjct: 420 KLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTI 479

Query: 542 MEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGL 601
           +E +   G +++A  +F  +  K   P+   Y +++    K G++ +A      M + G 
Sbjct: 480 IEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGN 539

Query: 602 RPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGF 661
            PN  T N+L+ A LR G L+ +  L++ M + G      +  +++     A     + +
Sbjct: 540 APNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDMLLSAMKRLTLRY 599

Query: 662 C--------HELMAVSG 670
           C         +L+ +SG
Sbjct: 600 CLSKGSKSRQDLLELSG 616



 Score =  129 bits (325), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 89/329 (27%), Positives = 164/329 (49%), Gaps = 4/329 (1%)

Query: 322 NYSMDAYQANQVLKQL-QDHTV--ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGA 378
           N   D +  + ++  L +D  +  A+  F  +  + G K    TY ++V  L +A ++  
Sbjct: 223 NVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETK-GIKSSVVTYNSLVRGLCKAGKWND 281

Query: 379 INKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLID 438
              LL  MV     PNV+T+N L+  + +   L EA +++K+M   G  P+ +TY TL+D
Sbjct: 282 GALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMD 341

Query: 439 IHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIP 498
            +     L  A +M   M     SPD  T++ +I        +    ++F  +  +G + 
Sbjct: 342 GYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVA 401

Query: 499 NLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVF 558
           N VTY+I++    ++   + A +L+++M + G  PD +TY I+++ L   G L++A  +F
Sbjct: 402 NAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIF 461

Query: 559 AEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRV 618
            ++++        +Y  +++   K G V  AW  + ++   G++PNV T   ++S   + 
Sbjct: 462 EDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKK 521

Query: 619 GQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
           G LS+A  LL+ M   G  P+  TY  L+
Sbjct: 522 GSLSEANILLRKMEEDGNAPNDCTYNTLI 550



 Score =  122 bits (305), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 72/278 (25%), Positives = 140/278 (50%)

Query: 370 LGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPD 429
           + R +QF  +     Q+  +G   N+ T N +I+ + R      A  V  ++  +G EPD
Sbjct: 98  IARTKQFNLVLDFCKQLELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPD 157

Query: 430 RVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFC 489
             T+ TLI      G +  A+ +  +M   G  PD  TY+ I+N + ++G    A  L  
Sbjct: 158 TTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLR 217

Query: 490 EMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCG 549
           +M  +    ++ TY+ +I    +     +A+ L+++M+  G +   VTY+ ++  L   G
Sbjct: 218 KMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAG 277

Query: 550 YLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCN 609
             ++   +  +M  +  VP+   + +L+D++ K G +++A E Y+ M+  G+ PN+ T N
Sbjct: 278 KWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYN 337

Query: 610 SLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
           +L+  +    +LS+A ++L  M+     P + T+T L+
Sbjct: 338 TLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLI 375



 Score =  121 bits (304), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 98/377 (25%), Positives = 162/377 (42%), Gaps = 24/377 (6%)

Query: 382 LLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHA 441
           L  +M+R    P++V ++R   +  R    N  LD  KQ+++ G   +  T   +I+   
Sbjct: 75  LFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMINCFC 134

Query: 442 KAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLV 501
           +      A  +  K+   G  PDT T++ +I  L   G +  A  L   MV  GC P++V
Sbjct: 135 RCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVV 194

Query: 502 TYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEM 561
           TYN ++    ++ +   AL L R M+    + D  TYS +++ L   G +D A ++F EM
Sbjct: 195 TYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEM 254

Query: 562 RRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQL 621
             K        Y  LV    KAG         + M+   + PNV T N LL  F++ G+L
Sbjct: 255 ETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKL 314

Query: 622 SDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGFCHELMAVSGHPAHMFLLSMP 681
            +A  L + M+  G+ P++ TY  L+            G+C +   +S     + L+   
Sbjct: 315 QEANELYKEMITRGISPNIITYNTLMD-----------GYCMQ-NRLSEANNMLDLMVRN 362

Query: 682 SPGPDGQNVRDHVGSFLEMMHSED------RESKRGLVDAVVDF------LHKSGLKEEA 729
              PD       +  +  +   +D        SKRGLV   V +        +SG  + A
Sbjct: 363 KCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLA 422

Query: 730 GSVWEVAAQKNVYPDAV 746
             +++      V PD +
Sbjct: 423 EELFQEMVSHGVLPDVM 439



 Score = 60.1 bits (144), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 49/236 (20%), Positives = 102/236 (43%), Gaps = 35/236 (14%)

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
           ++A+ +F++M      P  V +       A+    ++ +D  K+++  G++ + +T +++
Sbjct: 70  DDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIM 129

Query: 472 INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF 531
           INC             FC      C      Y+++             +KL       G+
Sbjct: 130 INC-------------FCR-----CCKTCFAYSVL----------GKVMKL-------GY 154

Query: 532 EPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWE 591
           EPD  T++ +++ L   G + EA  +   M      PD   Y  +V+   ++G+   A +
Sbjct: 155 EPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALD 214

Query: 592 WYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
               M +  ++ +V T ++++ +  R G +  A  L + M   G+K S+ TY  L+
Sbjct: 215 LLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLV 270



 Score = 44.3 bits (103), Expect = 0.27,   Method: Compositional matrix adjust.
 Identities = 28/89 (31%), Positives = 42/89 (47%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           G K +  TYT M+  L +       N LL +M  DG  PN  TYN LI ++ R   L  +
Sbjct: 503 GVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTAS 562

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKA 443
             + ++M+  G   D  +   +ID+   A
Sbjct: 563 AKLIEEMKSCGFSADASSIKMVIDMLLSA 591


>gi|255540069|ref|XP_002511099.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223550214|gb|EEF51701.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 1151

 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 104/368 (28%), Positives = 172/368 (46%), Gaps = 3/368 (0%)

Query: 380 NKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDI 439
           N+L  +M+  G +PN+V Y  ++    +     EA+ +   M+  G  PD   Y T+I  
Sbjct: 462 NELFQEMISWGLKPNIVIYTTIVKGLVKEGRFEEAIKILGVMKDQGLSPDVFCYNTVIIG 521

Query: 440 HAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPN 499
             KAG ++       +M A GL P+ +TY   I+   +AG +QAA + F EM++ G  PN
Sbjct: 522 FCKAGKMEEGKSYLVEMIAKGLKPNVYTYGAFIHGYCRAGEMQAAERSFIEMLDSGIAPN 581

Query: 500 LVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFA 559
            V    +I    K  N   A   +R M + G  PD  T+S+++  L   G L EA  VF+
Sbjct: 582 DVICTDLIDGYCKDGNTTKAFAKFRCMLDQGVLPDVQTHSVLIHGLSKNGKLQEAMGVFS 641

Query: 560 EMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVG 619
           E+  K  VPD   Y  L+    K G+++ A+E ++ M + G+ PN+ T N+L++   ++G
Sbjct: 642 ELLDKGLVPDVFTYTSLISNLCKEGDLKAAFELHDDMCKKGINPNIVTYNALINGLCKLG 701

Query: 620 QLSDAYHLLQGMLNLGLKPSLQTY-TLLLSCCTEARSPYDMGFCHELMAVSGHPAHMFLL 678
           +++ A  L  G+   GL  +  TY T++   C  A         H +  V   P      
Sbjct: 702 EIAKARELFDGIPEKGLARNSVTYSTIIAGYCKSANLTEAFQLFHGMKLVGVPPDSFVYC 761

Query: 679 SMPSPGPDGQNVRDHVGSFLEMMHSEDRESKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQ 738
           ++        N    +  FL M+  E+  +     +A++D   K G   EA  + E    
Sbjct: 762 ALIDGCCKAGNTEKALSLFLGMV--EEGIASTPAFNALIDGFFKLGKLIEAYQLVEDMVD 819

Query: 739 KNVYPDAV 746
            ++ P+ V
Sbjct: 820 NHITPNHV 827



 Score =  149 bits (377), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 112/375 (29%), Positives = 181/375 (48%), Gaps = 26/375 (6%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           G K + +TY   +    RA +  A  +   +M+  G  PN V    LI  Y +     +A
Sbjct: 542 GLKPNVYTYGAFIHGYCRAGEMQAAERSFIEMLDSGIAPNDVICTDLIDGYCKDGNTTKA 601

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
              F+ M   G  PD  T+  LI   +K G L  AM ++ ++   GL PD FTY+ +I+ 
Sbjct: 602 FAKFRCMLDQGVLPDVQTHSVLIHGLSKNGKLQEAMGVFSELLDKGLVPDVFTYTSLISN 661

Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPD 534
           L K G L+AA +L  +M  +G  PN+VTYN +I    K      A +L+  +   G   +
Sbjct: 662 LCKEGDLKAAFELHDDMCKKGINPNIVTYNALINGLCKLGEIAKARELFDGIPEKGLARN 721

Query: 535 KVTYSIVMEVLGHC--GYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEW 592
            VTYS +  + G+C    L EA  +F  M+     PD  VY  L+D   KAGN  KA   
Sbjct: 722 SVTYSTI--IAGYCKSANLTEAFQLFHGMKLVGVPPDSFVYCALIDGCCKAGNTEKALSL 779

Query: 593 YEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSC-CT 651
           +  M++ G+  + P  N+L+  F ++G+L +AY L++ M++  + P+  TYT+L+   CT
Sbjct: 780 FLGMVEEGI-ASTPAFNALIDGFFKLGKLIEAYQLVEDMVDNHITPNHVTYTILIEYHCT 838

Query: 652 EARSPYDMGFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRESKRG 711
                  +G   E        A    + M       +NV  +V ++  ++H  +R  +R 
Sbjct: 839 -------VGNIKE--------AEQLFMEMQK-----RNVMPNVLTYTSLLHGYNRIGRRS 878

Query: 712 LVDAVVDFLHKSGLK 726
            + ++ D +   G+K
Sbjct: 879 EMFSLFDEMVARGIK 893



 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 81/295 (27%), Positives = 151/295 (51%), Gaps = 4/295 (1%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           G K D   YT ++    +    G   ++ ++M     + N  TY  LIH   +   L +A
Sbjct: 332 GLKPDHVAYTALINGFVKQSDIGGAFQVKEEMFARKIKLNTFTYYALIHGLCKIGDLEKA 391

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
            D+F +M ++G +PD  TY  LI+ + K   ++ A ++  +++   L+ + +    I+N 
Sbjct: 392 EDLFSEMTMMGIKPDIQTYNCLIEGYYKVQNMEKAYELLIEIKKENLTANAYMCGAIVNG 451

Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPD 534
           L   G L  A++LF EM++ G  PN+V Y  ++    K   ++ A+K+   M++ G  PD
Sbjct: 452 LCHCGDLTRANELFQEMISWGLKPNIVIYTTIVKGLVKEGRFEEAIKILGVMKDQGLSPD 511

Query: 535 KVTYSIVMEVLGHC--GYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEW 592
              Y+ V  ++G C  G ++E ++   EM  K   P+   YG  +  + +AG ++ A   
Sbjct: 512 VFCYNTV--IIGFCKAGKMEEGKSYLVEMIAKGLKPNVYTYGAFIHGYCRAGEMQAAERS 569

Query: 593 YEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
           +  ML +G+ PN   C  L+  + + G  + A+   + ML+ G+ P +QT+++L+
Sbjct: 570 FIEMLDSGIAPNDVICTDLIDGYCKDGNTTKAFAKFRCMLDQGVLPDVQTHSVLI 624



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 102/383 (26%), Positives = 176/383 (45%), Gaps = 42/383 (10%)

Query: 296 NVVESVSRILRQWKWGPLAEEA----LGNTNYSMDAYQANQVLKQLQDHTVALGFFNWLR 351
           N V+ ++ +L+Q  W  L E +      N +      + NQV+   + H    GFFNW+ 
Sbjct: 43  NTVKEITSLLKQKNWQFLIESSPLPNKLNPDVVFLVIKQNQVIDPKRLH----GFFNWVN 98

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRAN-- 409
            +  F  +  T++ +  IL  +  FG    +L++M+ D   P+V   + +I  Y   N  
Sbjct: 99  SRTVFSQNLSTFSILSLILCNSGLFGNAANVLERMI-DTRNPHVKILDSIIKCYKEINGS 157

Query: 410 --------------------YLNEALDVFKQMQ----VVGCEPDRVTYC-TLIDIHAKAG 444
                               +LNEA+ VF   +    +VG     +  C +L     K  
Sbjct: 158 SSSSSVVVFEILIDIYRKKGFLNEAVSVFLGAKTNEFIVG-----LACCNSLSKDLLKGN 212

Query: 445 FLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYN 504
            +++   +YK M  A + PD +TY+ +IN   + G ++    +  +M  +GCIPNLVTY+
Sbjct: 213 RVELFWKVYKGMLGA-IVPDVYTYTNLINAYCRVGKVEEGKHVLFDMEEKGCIPNLVTYS 271

Query: 505 IMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRK 564
           ++IA   +A +   AL+L R M N G  PD   Y+ +++         E +++  EM   
Sbjct: 272 VVIAGLCRAGDVDEALELKRSMANKGLLPDNYIYATLIDGFCRQKRSTEGKSMLDEMYTM 331

Query: 565 NWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDA 624
              PD   Y  L++ + K  ++  A++  E M    ++ N  T  +L+    ++G L  A
Sbjct: 332 GLKPDHVAYTALINGFVKQSDIGGAFQVKEEMFARKIKLNTFTYYALIHGLCKIGDLEKA 391

Query: 625 YHLLQGMLNLGLKPSLQTYTLLL 647
             L   M  +G+KP +QTY  L+
Sbjct: 392 EDLFSEMTMMGIKPDIQTYNCLI 414



 Score =  132 bits (332), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 106/382 (27%), Positives = 166/382 (43%), Gaps = 53/382 (13%)

Query: 319 GNTNYSMDAYQA---NQVLKQLQDHTV-------------ALGFFNWLRRQAGFKHDEHT 362
           GNT  +   ++      VL  +Q H+V             A+G F+ L  + G   D  T
Sbjct: 596 GNTTKAFAKFRCMLDQGVLPDVQTHSVLIHGLSKNGKLQEAMGVFSELLDK-GLVPDVFT 654

Query: 363 YTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHS------------------ 404
           YT+++  L +     A  +L D M + G  PN+VTYN LI+                   
Sbjct: 655 YTSLISNLCKEGDLKAAFELHDDMCKKGINPNIVTYNALINGLCKLGEIAKARELFDGIP 714

Query: 405 -----------------YGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLD 447
                            Y ++  L EA  +F  M++VG  PD   YC LID   KAG  +
Sbjct: 715 EKGLARNSVTYSTIIAGYCKSANLTEAFQLFHGMKLVGVPPDSFVYCALIDGCCKAGNTE 774

Query: 448 VAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMI 507
            A+ ++  M   G++  T  ++ +I+   K G L  A+QL  +MV+    PN VTY I+I
Sbjct: 775 KALSLFLGMVEEGIAS-TPAFNALIDGFFKLGKLIEAYQLVEDMVDNHITPNHVTYTILI 833

Query: 508 ALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWV 567
                  N + A +L+ +MQ     P+ +TY+ ++      G   E  ++F EM  +   
Sbjct: 834 EYHCTVGNIKEAEQLFMEMQKRNVMPNVLTYTSLLHGYNRIGRRSEMFSLFDEMVARGIK 893

Query: 568 PDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHL 627
           PD+  + ++VD   K GN  KA +  + ML  G+         L+ A  +   LS+   +
Sbjct: 894 PDDLAWSVMVDAHLKEGNWIKALKLVDDMLSEGVNVCKNLYTILIDALCKHNNLSEVLKV 953

Query: 628 LQGMLNLGLKPSLQTYTLLLSC 649
           L  +   G K SL T   L+ C
Sbjct: 954 LDEVEKQGSKLSLATCGTLVCC 975



 Score =  129 bits (324), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 90/320 (28%), Positives = 137/320 (42%), Gaps = 35/320 (10%)

Query: 359 DEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVF 418
           D +TYT ++    R  +      +L  M   GC PN+VTY+ +I    RA  ++EAL++ 
Sbjct: 231 DVYTYTNLINAYCRVGKVEEGKHVLFDMEEKGCIPNLVTYSVVIAGLCRAGDVDEALELK 290

Query: 419 KQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPD-------------- 464
           + M   G  PD   Y TLID   +         M  +M   GL PD              
Sbjct: 291 RSMANKGLLPDNYIYATLIDGFCRQKRSTEGKSMLDEMYTMGLKPDHVAYTALINGFVKQ 350

Query: 465 ---------------------TFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTY 503
                                TFTY  +I+ L K G L+ A  LF EM   G  P++ TY
Sbjct: 351 SDIGGAFQVKEEMFARKIKLNTFTYYALIHGLCKIGDLEKAEDLFSEMTMMGIKPDIQTY 410

Query: 504 NIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRR 563
           N +I    K +N + A +L  +++      +      ++  L HCG L  A  +F EM  
Sbjct: 411 NCLIEGYYKVQNMEKAYELLIEIKKENLTANAYMCGAIVNGLCHCGDLTRANELFQEMIS 470

Query: 564 KNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSD 623
               P+  +Y  +V    K G   +A +    M   GL P+V   N+++  F + G++ +
Sbjct: 471 WGLKPNIVIYTTIVKGLVKEGRFEEAIKILGVMKDQGLSPDVFCYNTVIIGFCKAGKMEE 530

Query: 624 AYHLLQGMLNLGLKPSLQTY 643
               L  M+  GLKP++ TY
Sbjct: 531 GKSYLVEMIAKGLKPNVYTY 550



 Score =  124 bits (311), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 73/255 (28%), Positives = 124/255 (48%)

Query: 393 PNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDM 452
           P+V TY  LI++Y R   + E   V   M+  GC P+ VTY  +I    +AG +D A+++
Sbjct: 230 PDVYTYTNLINAYCRVGKVEEGKHVLFDMEEKGCIPNLVTYSVVIAGLCRAGDVDEALEL 289

Query: 453 YKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAK 512
            + M   GL PD + Y+ +I+   +         +  EM   G  P+ V Y  +I    K
Sbjct: 290 KRSMANKGLLPDNYIYATLIDGFCRQKRSTEGKSMLDEMYTMGLKPDHVAYTALINGFVK 349

Query: 513 ARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPV 572
             +   A ++  +M     + +  TY  ++  L   G L++AE +F+EM      PD   
Sbjct: 350 QSDIGGAFQVKEEMFARKIKLNTFTYYALIHGLCKIGDLEKAEDLFSEMTMMGIKPDIQT 409

Query: 573 YGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGML 632
           Y  L++ + K  N+ KA+E    + +  L  N   C ++++     G L+ A  L Q M+
Sbjct: 410 YNCLIEGYYKVQNMEKAYELLIEIKKENLTANAYMCGAIVNGLCHCGDLTRANELFQEMI 469

Query: 633 NLGLKPSLQTYTLLL 647
           + GLKP++  YT ++
Sbjct: 470 SWGLKPNIVIYTTIV 484



 Score = 85.9 bits (211), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 67/261 (25%), Positives = 116/261 (44%), Gaps = 2/261 (0%)

Query: 341 TVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNR 400
           T A   F+ ++   G   D   Y  ++    +A        L   MV +G   +   +N 
Sbjct: 739 TEAFQLFHGMKL-VGVPPDSFVYCALIDGCCKAGNTEKALSLFLGMVEEGI-ASTPAFNA 796

Query: 401 LIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAG 460
           LI  + +   L EA  + + M      P+ VTY  LI+ H   G +  A  ++ +MQ   
Sbjct: 797 LIDGFFKLGKLIEAYQLVEDMVDNHITPNHVTYTILIEYHCTVGNIKEAEQLFMEMQKRN 856

Query: 461 LSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSAL 520
           + P+  TY+ +++   + G       LF EMV +G  P+ + +++M+    K  N+  AL
Sbjct: 857 VMPNVLTYTSLLHGYNRIGRRSEMFSLFDEMVARGIKPDDLAWSVMVDAHLKEGNWIKAL 916

Query: 521 KLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLW 580
           KL  DM + G    K  Y+I+++ L     L E   V  E+ ++         G LV  +
Sbjct: 917 KLVDDMLSEGVNVCKNLYTILIDALCKHNNLSEVLKVLDEVEKQGSKLSLATCGTLVCCF 976

Query: 581 GKAGNVRKAWEWYEAMLQAGL 601
            +AG   +A    E+M+++ L
Sbjct: 977 HRAGRTDEALRVLESMVRSFL 997


>gi|255574497|ref|XP_002528160.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223532417|gb|EEF34211.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 569

 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 78/291 (26%), Positives = 152/291 (52%)

Query: 361 HTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQ 420
            TYT ++ + G+A Q     KL ++M    C+PN+ TY  L++++ R     +A ++F+Q
Sbjct: 254 ETYTLLINLHGKASQSYMALKLFNEMRSQKCKPNICTYTALVNAFAREGLCEKAEEIFEQ 313

Query: 421 MQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGH 480
           +Q  G EPD   Y  L++ +++AGF   A +++  MQ  G  PD  +Y+++++  G+ G 
Sbjct: 314 LQEDGHEPDVYAYNALMEAYSRAGFPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRGGL 373

Query: 481 LQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSI 540
            + A  +F EM   G  P + ++ ++++  +KA +      +  ++  +G EPD    + 
Sbjct: 374 HEDAQAVFEEMKRLGITPTMKSHMLLLSAYSKAGDVAKCEDIVNELHESGLEPDTFVLNS 433

Query: 541 VMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAG 600
           ++ + G  G   + E V   M    +  D   Y +L++++G+AG   K    ++++    
Sbjct: 434 MLNLYGRLGQFGKMEEVLTAMESGPYATDISTYNILINIYGRAGFFEKMEGLFQSLAAKN 493

Query: 601 LRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCT 651
           L+P+V T  S L A+ R    +    + + M++ G  P  +T  +LLS C+
Sbjct: 494 LKPDVVTWTSRLGAYSRKKLYTKCLEIFEEMIDAGCHPDGRTAKVLLSSCS 544



 Score =  144 bits (364), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 97/370 (26%), Positives = 179/370 (48%), Gaps = 18/370 (4%)

Query: 386 MVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGF 445
           + R   Q +V+ +N +I +YGR +    A   + ++    C P   TY  L+  +  +G 
Sbjct: 139 LYRSSFQSDVMIFNLVIDAYGRKSLYKMAETTYFELIEARCIPTEDTYALLLKAYCTSGL 198

Query: 446 LDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNI 505
           L+ A  ++ +M+  GL P    Y+  I+ L KAG+ Q A ++F  M    C P+  TY +
Sbjct: 199 LEKAEAIFAEMRKYGLPPSAIVYNAYIDGLMKAGNPQRAVEIFQRMKRDCCQPSTETYTL 258

Query: 506 MIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKN 565
           +I L  KA     ALKL+ +M++   +P+  TY+ ++      G  ++AE +F +++   
Sbjct: 259 LINLHGKASQSYMALKLFNEMRSQKCKPNICTYTALVNAFAREGLCEKAEEIFEQLQEDG 318

Query: 566 WVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAY 625
             PD   Y  L++ + +AG    A E +  M   G  P+  + N ++ A+ R G   DA 
Sbjct: 319 HEPDVYAYNALMEAYSRAGFPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRGGLHEDAQ 378

Query: 626 HLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGFCHEL---MAVSGHPAHMFLLSMPS 682
            + + M  LG+ P+++++ LLLS  ++A    D+  C ++   +  SG     F+L+   
Sbjct: 379 AVFEEMKRLGITPTMKSHMLLLSAYSKAG---DVAKCEDIVNELHESGLEPDTFVLN--- 432

Query: 683 PGPDGQNVRDHVGSFLEM------MHSEDRESKRGLVDAVVDFLHKSGLKEEAGSVWEVA 736
                 N+   +G F +M      M S    +     + +++   ++G  E+   +++  
Sbjct: 433 ---SMLNLYGRLGQFGKMEEVLTAMESGPYATDISTYNILINIYGRAGFFEKMEGLFQSL 489

Query: 737 AQKNVYPDAV 746
           A KN+ PD V
Sbjct: 490 AAKNLKPDVV 499



 Score =  142 bits (357), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 76/289 (26%), Positives = 150/289 (51%)

Query: 360 EHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFK 419
           E TY  ++     +        +  +M + G  P+ + YN  I    +A     A+++F+
Sbjct: 183 EDTYALLLKAYCTSGLLEKAEAIFAEMRKYGLPPSAIVYNAYIDGLMKAGNPQRAVEIFQ 242

Query: 420 QMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAG 479
           +M+   C+P   TY  LI++H KA    +A+ ++ +M++    P+  TY+ ++N   + G
Sbjct: 243 RMKRDCCQPSTETYTLLINLHGKASQSYMALKLFNEMRSQKCKPNICTYTALVNAFAREG 302

Query: 480 HLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYS 539
             + A ++F ++   G  P++  YN ++   ++A     A +++  MQ+ G EPD+ +Y+
Sbjct: 303 LCEKAEEIFEQLQEDGHEPDVYAYNALMEAYSRAGFPYGAAEIFSLMQHMGCEPDRASYN 362

Query: 540 IVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQA 599
           I+++  G  G  ++A+AVF EM+R    P    + LL+  + KAG+V K  +    + ++
Sbjct: 363 IMVDAYGRGGLHEDAQAVFEEMKRLGITPTMKSHMLLLSAYSKAGDVAKCEDIVNELHES 422

Query: 600 GLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
           GL P+    NS+L+ + R+GQ      +L  M +      + TY +L++
Sbjct: 423 GLEPDTFVLNSMLNLYGRLGQFGKMEEVLTAMESGPYATDISTYNILIN 471



 Score =  139 bits (350), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 79/291 (27%), Positives = 142/291 (48%)

Query: 348 NWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGR 407
            W+  ++ F+ D   +  ++   GR   +        +++   C P   TY  L+ +Y  
Sbjct: 136 QWILYRSSFQSDVMIFNLVIDAYGRKSLYKMAETTYFELIEARCIPTEDTYALLLKAYCT 195

Query: 408 ANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFT 467
           +  L +A  +F +M+  G  P  + Y   ID   KAG    A++++++M+     P T T
Sbjct: 196 SGLLEKAEAIFAEMRKYGLPPSAIVYNAYIDGLMKAGNPQRAVEIFQRMKRDCCQPSTET 255

Query: 468 YSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQ 527
           Y+++IN  GKA     A +LF EM +Q C PN+ TY  ++   A+    + A +++  +Q
Sbjct: 256 YTLLINLHGKASQSYMALKLFNEMRSQKCKPNICTYTALVNAFAREGLCEKAEEIFEQLQ 315

Query: 528 NAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVR 587
             G EPD   Y+ +ME     G+   A  +F+ M+     PD   Y ++VD +G+ G   
Sbjct: 316 EDGHEPDVYAYNALMEAYSRAGFPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRGGLHE 375

Query: 588 KAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKP 638
            A   +E M + G+ P + +   LLSA+ + G ++    ++  +   GL+P
Sbjct: 376 DAQAVFEEMKRLGITPTMKSHMLLLSAYSKAGDVAKCEDIVNELHESGLEP 426



 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 75/290 (25%), Positives = 143/290 (49%), Gaps = 1/290 (0%)

Query: 342 VALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRL 401
           +AL  FN +R Q   K +  TYT +V    R        ++ +Q+  DG +P+V  YN L
Sbjct: 271 MALKLFNEMRSQKC-KPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGHEPDVYAYNAL 329

Query: 402 IHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGL 461
           + +Y RA +   A ++F  MQ +GCEPDR +Y  ++D + + G  + A  ++++M+  G+
Sbjct: 330 MEAYSRAGFPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRGGLHEDAQAVFEEMKRLGI 389

Query: 462 SPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALK 521
           +P   ++ ++++   KAG +     +  E+   G  P+    N M+ L  +   +    +
Sbjct: 390 TPTMKSHMLLLSAYSKAGDVAKCEDIVNELHESGLEPDTFVLNSMLNLYGRLGQFGKMEE 449

Query: 522 LYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWG 581
           +   M++  +  D  TY+I++ + G  G+ ++ E +F  +  KN  PD   +   +  + 
Sbjct: 450 VLTAMESGPYATDISTYNILINIYGRAGFFEKMEGLFQSLAAKNLKPDVVTWTSRLGAYS 509

Query: 582 KAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGM 631
           +     K  E +E M+ AG  P+  T   LLS+     Q+     +++ M
Sbjct: 510 RKKLYTKCLEIFEEMIDAGCHPDGRTAKVLLSSCSSEDQIEQVTTVIRTM 559


>gi|296085044|emb|CBI28459.3| unnamed protein product [Vitis vinifera]
          Length = 973

 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 112/438 (25%), Positives = 200/438 (45%), Gaps = 16/438 (3%)

Query: 354 AGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNE 413
            G K +  TY  ++    R        ++ D+MV  G + N++ +N L++   +A  + +
Sbjct: 305 VGLKPEPITYNALIDGFMRQGDIEQAFRIKDEMVACGIEANLIIWNTLLNGVCKAGKMEK 364

Query: 414 ALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIIN 473
           AL++ ++M   G EPD  TY  LI+ H +   +  A ++  +M+   L+P   TYSVIIN
Sbjct: 365 ALEIMQEMMEKGVEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKRKLAPTVLTYSVIIN 424

Query: 474 CLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEP 533
            L + G+LQ  + +  EMV  G  PN V Y  ++   AK    + +  +   M+  G  P
Sbjct: 425 GLCRCGNLQGTNAILREMVMNGLKPNAVVYTTLMTAHAKEGRVEESRMILERMREQGILP 484

Query: 534 DKVTYSIVMEVLGHC--GYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWE 591
           D   Y+ +  ++G C    ++EA     EM  +   P+   YG  +D + KAG +  A  
Sbjct: 485 DVFCYNSL--IIGFCKAKRMEEARTYLMEMLERRLRPNAHTYGAFIDGYSKAGEMEIADR 542

Query: 592 WYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCT 651
           ++  ML  G+ PNV    +L+    + G +++A+ + + +L+  +   +QTY++L+   +
Sbjct: 543 YFNEMLSCGVLPNVGIYTALIEGHCKEGNVTEAFSVFRFILSRRVLQDVQTYSVLIHGLS 602

Query: 652 EARSPYD-MGFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRESKR 710
                ++  G   EL      P      S+ S      NV D     LE M  +      
Sbjct: 603 RNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQGNV-DKASQLLEEMCIKGINPDI 661

Query: 711 GLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAVKEKGMSYWLINLHVMSDGTAVIAL 770
              + ++D L K+G         E+   KN++ D ++ +G++   +    M DG      
Sbjct: 662 VTYNILIDGLCKAG---------EIERAKNLFDD-IEGRGLTPNCVTYAAMVDGYCKSKN 711

Query: 771 SRTLAWFRKQMLISGVGP 788
                   ++ML+ GV P
Sbjct: 712 PTAAFQLLEEMLLRGVPP 729



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 101/386 (26%), Positives = 181/386 (46%), Gaps = 3/386 (0%)

Query: 362 TYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQM 421
           TY+ ++  L R       N +L +MV +G +PN V Y  L+ ++ +   + E+  + ++M
Sbjct: 418 TYSVIINGLCRCGNLQGTNAILREMVMNGLKPNAVVYTTLMTAHAKEGRVEESRMILERM 477

Query: 422 QVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHL 481
           +  G  PD   Y +LI    KA  ++ A     +M    L P+  TY   I+   KAG +
Sbjct: 478 REQGILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLERRLRPNAHTYGAFIDGYSKAGEM 537

Query: 482 QAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIV 541
           + A + F EM++ G +PN+  Y  +I    K  N   A  ++R + +     D  TYS++
Sbjct: 538 EIADRYFNEMLSCGVLPNVGIYTALIEGHCKEGNVTEAFSVFRFILSRRVLQDVQTYSVL 597

Query: 542 MEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGL 601
           +  L   G + EA  +F+E++ K  +P+   Y  L+    K GNV KA +  E M   G+
Sbjct: 598 IHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQGNVDKASQLLEEMCIKGI 657

Query: 602 RPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGF 661
            P++ T N L+    + G++  A +L   +   GL P+  TY  ++    ++++P     
Sbjct: 658 NPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYAAMVDGYCKSKNPTAAFQ 717

Query: 662 CHELMAVSGHPAHMFLLS-MPSPGPDGQNVRDHVGSFLEMMHSEDRESKRGLVDAVVDFL 720
             E M + G P   F+ + + +     +     +  F EM+  E   +     + +++  
Sbjct: 718 LLEEMLLRGVPPDAFIYNVILNFCCKEEKFEKALDLFQEML--EKGFASTVSFNTLIEGY 775

Query: 721 HKSGLKEEAGSVWEVAAQKNVYPDAV 746
            KSG  +EA  + E   +K   P+ V
Sbjct: 776 CKSGKLQEANHLLEEMIEKQFIPNHV 801



 Score =  136 bits (342), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 104/440 (23%), Positives = 187/440 (42%), Gaps = 46/440 (10%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           R+ G   D   Y +++    +A++       L +M+    +PN  TY   I  Y +A  +
Sbjct: 478 REQGILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLERRLRPNAHTYGAFIDGYSKAGEM 537

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
             A   F +M   G  P+   Y  LI+ H K G +  A  +++ + +  +  D  TYSV+
Sbjct: 538 EIADRYFNEMLSCGVLPNVGIYTALIEGHCKEGNVTEAFSVFRFILSRRVLQDVQTYSVL 597

Query: 472 INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF 531
           I+ L + G +  A  +F E+  +G +PN  TYN +I+   K  N   A +L  +M   G 
Sbjct: 598 IHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQGNVDKASQLLEEMCIKGI 657

Query: 532 EPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWE 591
            PD VTY+I+++ L   G ++ A+ +F ++  +   P+   Y  +VD + K+ N   A++
Sbjct: 658 NPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYAAMVDGYCKSKNPTAAFQ 717

Query: 592 WYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCT 651
             E ML  G+ P+    N +L+   +  +   A  L Q ML  G   ++   TL+   C 
Sbjct: 718 LLEEMLLRGVPPDAFIYNVILNFCCKEEKFEKALDLFQEMLEKGFASTVSFNTLIEGYCK 777

Query: 652 EARSPYDMGFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRESKRG 711
             +         E++     P H+   S+                               
Sbjct: 778 SGKLQEANHLLEEMIEKQFIPNHVTYTSL------------------------------- 806

Query: 712 LVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAVKEKGMSYWLINLHVMSDGTAVIALS 771
                +D   K+G+  EA  +W    ++NV P A     + +   N+  MS+ +A+    
Sbjct: 807 -----IDHNCKAGMMGEAKRLWLEMQERNVMPTAKTYTSLLHGYHNIGNMSEVSALF--- 858

Query: 772 RTLAWFRKQMLISGVGPSRI 791
                  ++M+  G+ P ++
Sbjct: 859 -------EEMVAKGIEPDKM 871



 Score =  135 bits (341), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 90/371 (24%), Positives = 169/371 (45%), Gaps = 19/371 (5%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           G   D +TY  ++      ++      +L +M+  G +P  +TYN LI  + R   + +A
Sbjct: 271 GLVPDLYTYDILINGFCMEKRSREAKLMLLEMIDVGLKPEPITYNALIDGFMRQGDIEQA 330

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
             +  +M   G E + + + TL++   KAG ++ A+++ ++M   G+ PD+ TYS++I  
Sbjct: 331 FRIKDEMVACGIEANLIIWNTLLNGVCKAGKMEKALEIMQEMMEKGVEPDSQTYSLLIEG 390

Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPD 534
             +  ++  A +L  EM  +   P ++TY+++I    +  N Q    + R+M   G +P+
Sbjct: 391 HCRGQNMARAFELLDEMKKRKLAPTVLTYSVIINGLCRCGNLQGTNAILREMVMNGLKPN 450

Query: 535 KVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYE 594
            V Y+ +M      G ++E+  +   MR +  +PD   Y  L+  + KA  + +A  +  
Sbjct: 451 AVVYTTLMTAHAKEGRVEESRMILERMREQGILPDVFCYNSLIIGFCKAKRMEEARTYLM 510

Query: 595 AMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEAR 654
            ML+  LRPN  T  + +  + + G++  A      ML+ G+ P++  YT L+       
Sbjct: 511 EMLERRLRPNAHTYGAFIDGYSKAGEMEIADRYFNEMLSCGVLPNVGIYTALIE------ 564

Query: 655 SPYDMGFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRESKRGLVD 714
                G C E           F+LS        + V   V ++  ++H   R  K     
Sbjct: 565 -----GHCKEGNVTEAFSVFRFILS--------RRVLQDVQTYSVLIHGLSRNGKMHEAF 611

Query: 715 AVVDFLHKSGL 725
            +   L + GL
Sbjct: 612 GIFSELQEKGL 622



 Score =  135 bits (339), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 84/297 (28%), Positives = 150/297 (50%), Gaps = 4/297 (1%)

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
           + G + D  TY+ ++    R +      +LLD+M +    P V+TY+ +I+   R   L 
Sbjct: 374 EKGVEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKRKLAPTVLTYSVIINGLCRCGNLQ 433

Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
               + ++M + G +P+ V Y TL+  HAK G ++ +  + ++M+  G+ PD F Y+ +I
Sbjct: 434 GTNAILREMVMNGLKPNAVVYTTLMTAHAKEGRVEESRMILERMREQGILPDVFCYNSLI 493

Query: 473 NCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFE 532
               KA  ++ A     EM+ +   PN  TY   I   +KA   + A + + +M + G  
Sbjct: 494 IGFCKAKRMEEARTYLMEMLERRLRPNAHTYGAFIDGYSKAGEMEIADRYFNEMLSCGVL 553

Query: 533 PDKVTYSIVMEVLGHC--GYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAW 590
           P+   Y+ ++E  GHC  G + EA +VF  +  +  + D   Y +L+    + G + +A+
Sbjct: 554 PNVGIYTALIE--GHCKEGNVTEAFSVFRFILSRRVLQDVQTYSVLIHGLSRNGKMHEAF 611

Query: 591 EWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
             +  + + GL PN  T NSL+S   + G +  A  LL+ M   G+ P + TY +L+
Sbjct: 612 GIFSELQEKGLLPNAFTYNSLISGSCKQGNVDKASQLLEEMCIKGINPDIVTYNILI 668



 Score =  134 bits (336), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 94/336 (27%), Positives = 159/336 (47%), Gaps = 47/336 (13%)

Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINK---LLDQMVRDGCQPNVVTYN 399
           A G F+ L+ + G   +  TY +++   G  +Q G ++K   LL++M   G  P++VTYN
Sbjct: 610 AFGIFSELQEK-GLLPNAFTYNSLIS--GSCKQ-GNVDKASQLLEEMCIKGINPDIVTYN 665

Query: 400 RLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAA 459
            LI    +A  +  A ++F  ++  G  P+ VTY  ++D + K+     A  + ++M   
Sbjct: 666 ILIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYAAMVDGYCKSKNPTAAFQLLEEMLLR 725

Query: 460 GLSPDTFTYSVIIN-CLG---------------------------------KAGHLQAAH 485
           G+ PD F Y+VI+N C                                   K+G LQ A+
Sbjct: 726 GVPPDAFIYNVILNFCCKEEKFEKALDLFQEMLEKGFASTVSFNTLIEGYCKSGKLQEAN 785

Query: 486 QLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVL 545
            L  EM+ +  IPN VTY  +I    KA     A +L+ +MQ     P   TY+ ++   
Sbjct: 786 HLLEEMIEKQFIPNHVTYTSLIDHNCKAGMMGEAKRLWLEMQERNVMPTAKTYTSLLHGY 845

Query: 546 GHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAML------QA 599
            + G + E  A+F EM  K   PD+  Y +++D + + GNV +A +  + +L      ++
Sbjct: 846 HNIGNMSEVSALFEEMVAKGIEPDKMTYYVMIDAYCREGNVMEACKLKDEILVKGMPMKS 905

Query: 600 GLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLG 635
           G R  +PTC+ +   F   G + +A  +L+ M+  G
Sbjct: 906 GFRLGLPTCSVIARGFQIAGNMDEAAEVLRSMVKFG 941



 Score =  132 bits (331), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 87/302 (28%), Positives = 149/302 (49%), Gaps = 17/302 (5%)

Query: 359 DEHTYTTM------VGILGRAR----QFGAINKLLDQ-------MVRDGCQPNVVTYNRL 401
           D +TYT M      VG +  A+    + G   +LLD+       MV  G  P++ TY+ L
Sbjct: 223 DVYTYTNMISAHCKVGNVKDAKRVLLEMGEKARLLDEAIELKRSMVDKGLVPDLYTYDIL 282

Query: 402 IHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGL 461
           I+ +       EA  +  +M  VG +P+ +TY  LID   + G ++ A  +  +M A G+
Sbjct: 283 INGFCMEKRSREAKLMLLEMIDVGLKPEPITYNALIDGFMRQGDIEQAFRIKDEMVACGI 342

Query: 462 SPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALK 521
             +   ++ ++N + KAG ++ A ++  EM+ +G  P+  TY+++I    + +N   A +
Sbjct: 343 EANLIIWNTLLNGVCKAGKMEKALEIMQEMMEKGVEPDSQTYSLLIEGHCRGQNMARAFE 402

Query: 522 LYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWG 581
           L  +M+     P  +TYS+++  L  CG L    A+  EM      P+  VY  L+    
Sbjct: 403 LLDEMKKRKLAPTVLTYSVIINGLCRCGNLQGTNAILREMVMNGLKPNAVVYTTLMTAHA 462

Query: 582 KAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQ 641
           K G V ++    E M + G+ P+V   NSL+  F +  ++ +A   L  ML   L+P+  
Sbjct: 463 KEGRVEESRMILERMREQGILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLERRLRPNAH 522

Query: 642 TY 643
           TY
Sbjct: 523 TY 524



 Score =  118 bits (295), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 101/439 (23%), Positives = 181/439 (41%), Gaps = 75/439 (17%)

Query: 285 APFSRHFASTGN--VVESVSRILRQWKWGPLAEEALGNTNYSMDAYQANQVLKQLQDHTV 342
           A FS   A T N   V  ++ +L    W  L E +      + D  ++  +  Q+ D   
Sbjct: 21  ASFSSSQALTQNEDSVREITTLLNSHNWQALMESSDIPKKLNTDIIRSVILQNQVGDPKR 80

Query: 343 ALGFFNWLRRQAGF---KHDEHTYTTMVGILGRARQFGAINKLLDQMVRDG--------- 390
            L FF W + + G    + D    + +   L  +  +G  + L+  ++R+          
Sbjct: 81  LLNFFYWSQHKMGTSTAQQDLDVLSALAVNLCNSNWYGPASDLIKCIIRNSDSPLAVLGS 140

Query: 391 -------CQ--PNVVTYNRLIHSYGRANYLNEALDVF---KQMQ----VVGCE------- 427
                  C   PN V ++ L+ SY +  +L EA++VF   K  +    ++ C        
Sbjct: 141 IVKCYRSCNGSPNSVIFDMLMDSYRKMGFLVEAVNVFLGPKNFEFRPSLLSCNSLLGDLL 200

Query: 428 ---------------------PDRVTYCTLIDIHAKAG-----------------FLDVA 449
                                PD  TY  +I  H K G                  LD A
Sbjct: 201 KGNKVELFWKVFDGMCAHKVLPDVYTYTNMISAHCKVGNVKDAKRVLLEMGEKARLLDEA 260

Query: 450 MDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIAL 509
           +++ + M   GL PD +TY ++IN        + A  +  EM++ G  P  +TYN +I  
Sbjct: 261 IELKRSMVDKGLVPDLYTYDILINGFCMEKRSREAKLMLLEMIDVGLKPEPITYNALIDG 320

Query: 510 QAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPD 569
             +  + + A ++  +M   G E + + ++ ++  +   G +++A  +  EM  K   PD
Sbjct: 321 FMRQGDIEQAFRIKDEMVACGIEANLIIWNTLLNGVCKAGKMEKALEIMQEMMEKGVEPD 380

Query: 570 EPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQ 629
              Y LL++   +  N+ +A+E  + M +  L P V T + +++   R G L     +L+
Sbjct: 381 SQTYSLLIEGHCRGQNMARAFELLDEMKKRKLAPTVLTYSVIINGLCRCGNLQGTNAILR 440

Query: 630 GMLNLGLKPSLQTYTLLLS 648
            M+  GLKP+   YT L++
Sbjct: 441 EMVMNGLKPNAVVYTTLMT 459



 Score = 91.3 bits (225), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 64/230 (27%), Positives = 105/230 (45%), Gaps = 7/230 (3%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           G   D   Y  ++    +  +F     L  +M+  G   + V++N LI  Y ++  L EA
Sbjct: 726 GVPPDAFIYNVILNFCCKEEKFEKALDLFQEMLEKGF-ASTVSFNTLIEGYCKSGKLQEA 784

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
             + ++M      P+ VTY +LID + KAG +  A  ++ +MQ   + P   TY+ +++ 
Sbjct: 785 NHLLEEMIEKQFIPNHVTYTSLIDHNCKAGMMGEAKRLWLEMQERNVMPTAKTYTSLLHG 844

Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDM------QN 528
               G++     LF EMV +G  P+ +TY +MI    +  N   A KL  ++        
Sbjct: 845 YHNIGNMSEVSALFEEMVAKGIEPDKMTYYVMIDAYCREGNVMEACKLKDEILVKGMPMK 904

Query: 529 AGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVD 578
           +GF     T S++       G +DEA  V   M +  WV +    G LVD
Sbjct: 905 SGFRLGLPTCSVIARGFQIAGNMDEAAEVLRSMVKFGWVSNTTSLGDLVD 954



 Score = 57.4 bits (137), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 41/171 (23%), Positives = 75/171 (43%), Gaps = 6/171 (3%)

Query: 362 TYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQM 421
           TYT+++    +A   G   +L  +M      P   TY  L+H Y     ++E   +F++M
Sbjct: 802 TYTSLIDHNCKAGMMGEAKRLWLEMQERNVMPTAKTYTSLLHGYHNIGNMSEVSALFEEM 861

Query: 422 QVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTF------TYSVIINCL 475
              G EPD++TY  +ID + + G +  A  +  ++   G+   +       T SVI    
Sbjct: 862 VAKGIEPDKMTYYVMIDAYCREGNVMEACKLKDEILVKGMPMKSGFRLGLPTCSVIARGF 921

Query: 476 GKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDM 526
             AG++  A ++   MV  G + N  +   ++       N + +  L + M
Sbjct: 922 QIAGNMDEAAEVLRSMVKFGWVSNTTSLGDLVDGNQNGANSEDSDNLLKQM 972


>gi|224133106|ref|XP_002327962.1| predicted protein [Populus trichocarpa]
 gi|222837371|gb|EEE75750.1| predicted protein [Populus trichocarpa]
          Length = 487

 Score =  154 bits (390), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 92/297 (30%), Positives = 156/297 (52%), Gaps = 4/297 (1%)

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
           + GF+ D  T+++++  L    +F    +  D+MV  G QPN+ TYN +I  + +     
Sbjct: 147 KLGFEPDAVTFSSLINGLCFEDKFARAMEFFDEMVASGYQPNLHTYNTIIKGFCKIGKTT 206

Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
            A+ + K+M   G  PD V Y T+ID   K   +  A+D++ +++  G+ PD FTYS+++
Sbjct: 207 VAVGLLKKMDKAGGRPDIVIYNTIIDGLCKDRLVSEALDIFSEIKGKGVRPDVFTYSILM 266

Query: 473 NCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFE 532
           + L  +   + A  LF EM++   +P++VT+NI++    K      A  + + M   G E
Sbjct: 267 HGLCNSDQKEEASALFNEMMSLNIMPDVVTFNILVDKLCKEGMLSEAQGIIKIMIEKGVE 326

Query: 533 PDKVTYSIVMEVLGHC--GYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAW 590
           P+  TY+ +M   G+C    + EA  VF  M  K  +P+   Y +L++ + KA  + +A 
Sbjct: 327 PNYATYNSLMN--GYCLQNKVFEARMVFDAMITKGCMPNVVSYNILINGYCKAQRIDEAR 384

Query: 591 EWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
           E ++ M   GL PN    N+L+S   + G+  +A  L + M   G  P L T T+LL
Sbjct: 385 ELFDEMSFRGLIPNTFNYNTLISGLCQAGRHCEARELFKDMQAQGCSPDLVTCTILL 441



 Score =  135 bits (341), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 87/302 (28%), Positives = 151/302 (50%), Gaps = 6/302 (1%)

Query: 363 YTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQ 422
           +  ++  L R + +G +  L  ++     + +V  +N LI+ + R   ++ A  V  ++ 
Sbjct: 87  FDKLLSALVRIKHYGTVLSLSKRIELLRIERDVFHFNILINCFSRLQRVDFAFSVLGKII 146

Query: 423 VVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQ 482
            +G EPD VT+ +LI+          AM+ + +M A+G  P+  TY+ II    K G   
Sbjct: 147 KLGFEPDAVTFSSLINGLCFEDKFARAMEFFDEMVASGYQPNLHTYNTIIKGFCKIGKTT 206

Query: 483 AAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVM 542
            A  L  +M   G  P++V YN +I    K R    AL ++ +++  G  PD  TYSI+M
Sbjct: 207 VAVGLLKKMDKAGGRPDIVIYNTIIDGLCKDRLVSEALDIFSEIKGKGVRPDVFTYSILM 266

Query: 543 EVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLR 602
             L +    +EA A+F EM   N +PD   + +LVD   K G + +A    + M++ G+ 
Sbjct: 267 HGLCNSDQKEEASALFNEMMSLNIMPDVVTFNILVDKLCKEGMLSEAQGIIKIMIEKGVE 326

Query: 603 PNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS--C----CTEARSP 656
           PN  T NSL++ +    ++ +A  +   M+  G  P++ +Y +L++  C      EAR  
Sbjct: 327 PNYATYNSLMNGYCLQNKVFEARMVFDAMITKGCMPNVVSYNILINGYCKAQRIDEAREL 386

Query: 657 YD 658
           +D
Sbjct: 387 FD 388



 Score =  131 bits (330), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 91/345 (26%), Positives = 165/345 (47%), Gaps = 8/345 (2%)

Query: 280 IPAGLAPFSRHFASTGNVVESVSRILRQWKWGPLAEEALGNTNYSMDAYQANQVLK---Q 336
           I  G  P +  F+S  N +    +  R  ++     + +  + Y  + +  N ++K   +
Sbjct: 146 IKLGFEPDAVTFSSLINGLCFEDKFARAMEFF----DEMVASGYQPNLHTYNTIIKGFCK 201

Query: 337 LQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVV 396
           +   TVA+G    + + AG + D   Y T++  L + R       +  ++   G +P+V 
Sbjct: 202 IGKTTVAVGLLKKMDK-AGGRPDIVIYNTIIDGLCKDRLVSEALDIFSEIKGKGVRPDVF 260

Query: 397 TYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKM 456
           TY+ L+H    ++   EA  +F +M  +   PD VT+  L+D   K G L  A  + K M
Sbjct: 261 TYSILMHGLCNSDQKEEASALFNEMMSLNIMPDVVTFNILVDKLCKEGMLSEAQGIIKIM 320

Query: 457 QAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNY 516
              G+ P+  TY+ ++N       +  A  +F  M+ +GC+PN+V+YNI+I    KA+  
Sbjct: 321 IEKGVEPNYATYNSLMNGYCLQNKVFEARMVFDAMITKGCMPNVVSYNILINGYCKAQRI 380

Query: 517 QSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLL 576
             A +L+ +M   G  P+   Y+ ++  L   G   EA  +F +M+ +   PD     +L
Sbjct: 381 DEARELFDEMSFRGLIPNTFNYNTLISGLCQAGRHCEARELFKDMQAQGCSPDLVTCTIL 440

Query: 577 VDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQL 621
           +D   K G +  A   + AM  + L+PN+ T + L+ A  + G++
Sbjct: 441 LDSLCKLGYLDNALRLFRAMQDSCLKPNLVTYDILIRAMYKSGKI 485



 Score =  127 bits (318), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 79/292 (27%), Positives = 145/292 (49%)

Query: 357 KHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALD 416
           + D   +  ++    R ++      +L ++++ G +P+ VT++ LI+     +    A++
Sbjct: 116 ERDVFHFNILINCFSRLQRVDFAFSVLGKIIKLGFEPDAVTFSSLINGLCFEDKFARAME 175

Query: 417 VFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLG 476
            F +M   G +P+  TY T+I    K G   VA+ + KKM  AG  PD   Y+ II+ L 
Sbjct: 176 FFDEMVASGYQPNLHTYNTIIKGFCKIGKTTVAVGLLKKMDKAGGRPDIVIYNTIIDGLC 235

Query: 477 KAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKV 536
           K   +  A  +F E+  +G  P++ TY+I++     +   + A  L+ +M +    PD V
Sbjct: 236 KDRLVSEALDIFSEIKGKGVRPDVFTYSILMHGLCNSDQKEEASALFNEMMSLNIMPDVV 295

Query: 537 TYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAM 596
           T++I+++ L   G L EA+ +   M  K   P+   Y  L++ +     V +A   ++AM
Sbjct: 296 TFNILVDKLCKEGMLSEAQGIIKIMIEKGVEPNYATYNSLMNGYCLQNKVFEARMVFDAM 355

Query: 597 LQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
           +  G  PNV + N L++ + +  ++ +A  L   M   GL P+   Y  L+S
Sbjct: 356 ITKGCMPNVVSYNILINGYCKAQRIDEARELFDEMSFRGLIPNTFNYNTLIS 407



 Score = 75.9 bits (185), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 52/258 (20%), Positives = 120/258 (46%), Gaps = 2/258 (0%)

Query: 488 FCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGH 547
           F  M+++  +P +V ++ +++   + ++Y + L L + ++    E D   ++I++     
Sbjct: 72  FNHMIHKHPLPCIVEFDKLLSALVRIKHYGTVLSLSKRIELLRIERDVFHFNILINCFSR 131

Query: 548 CGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPT 607
              +D A +V  ++ +  + PD   +  L++         +A E+++ M+ +G +PN+ T
Sbjct: 132 LQRVDFAFSVLGKIIKLGFEPDAVTFSSLINGLCFEDKFARAMEFFDEMVASGYQPNLHT 191

Query: 608 CNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTY-TLLLSCCTEARSPYDMGFCHELM 666
            N+++  F ++G+ + A  LL+ M   G +P +  Y T++   C +      +    E+ 
Sbjct: 192 YNTIIKGFCKIGKTTVAVGLLKKMDKAGGRPDIVIYNTIIDGLCKDRLVSEALDIFSEIK 251

Query: 667 AVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRESKRGLVDAVVDFLHKSGLK 726
                P  +F  S+   G    + ++   +    M S +        + +VD L K G+ 
Sbjct: 252 GKGVRP-DVFTYSILMHGLCNSDQKEEASALFNEMMSLNIMPDVVTFNILVDKLCKEGML 310

Query: 727 EEAGSVWEVAAQKNVYPD 744
            EA  + ++  +K V P+
Sbjct: 311 SEAQGIIKIMIEKGVEPN 328


>gi|225459754|ref|XP_002284756.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20300,
           mitochondrial-like [Vitis vinifera]
          Length = 531

 Score =  154 bits (390), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 93/376 (24%), Positives = 166/376 (44%), Gaps = 73/376 (19%)

Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLI 402
            L FFNW      F H    Y  M+ + G+ RQF    +L+D M     +  V T+  L+
Sbjct: 129 TLAFFNWATNLEEFGHSPEPYMEMIDLAGKVRQFDLAWQLIDLMKTRNVEIPVETFTILV 188

Query: 403 HSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLID------------------------ 438
             Y +A    EA+  F +M+  GC+PD++ +  +I                         
Sbjct: 189 RRYVKAGLAAEAVHAFNRMEDYGCKPDKIAFSVVISSLSKKRRAIEAQSFFDSLKDRFEP 248

Query: 439 --------IHA--KAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLF 488
                   +H   +AG +  A  ++ +M+ AG+ P+ +TYS++I+ L ++G +  AH +F
Sbjct: 249 DVVVYTSLVHGWCRAGNISEAERVFGEMKMAGIQPNVYTYSIVIDALCRSGQITRAHDVF 308

Query: 489 CEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHC 548
            EM++ GC PN +T+N ++ +  KA   +  L++Y  M+  G  PD +TY+ ++E   HC
Sbjct: 309 SEMIDVGCDPNAITFNNLMRVHVKAGRTEKVLQVYNQMKRLGCPPDAITYNFLIE--SHC 366

Query: 549 ------------------------------------GYLDEAEAVFAEMRRKNWVPDEPV 572
                                               G ++ A  +FA+M+     P+   
Sbjct: 367 RDDNLEEAVKILNSVKKGCNLNASSFNPIFGCISKLGDVNSAHRMFAKMKDLKCRPNTVT 426

Query: 573 YGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGML 632
           Y +L+ ++    +     +  + M +  + PN  T   L+S F  +G  ++AY   + M+
Sbjct: 427 YNILMRMFADKKSTDMVLKLRKEMDENEIEPNANTYRVLISTFCGIGHWNNAYSFFKEMI 486

Query: 633 NLG-LKPSLQTYTLLL 647
               L+PSL  Y ++L
Sbjct: 487 EEKCLRPSLPVYEMVL 502



 Score =  146 bits (368), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 99/352 (28%), Positives = 164/352 (46%), Gaps = 48/352 (13%)

Query: 298 VESVSRILRQWKWGPLAEEALGNTNY------SMDAYQANQVLKQLQDHTVAL---GFFN 348
           VE+ + ++R++    LA EA+   N         D    + V+  L     A+    FF+
Sbjct: 181 VETFTILVRRYVKAGLAAEAVHAFNRMEDYGCKPDKIAFSVVISSLSKKRRAIEAQSFFD 240

Query: 349 WLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRA 408
            L+ +  F+ D   YT++V    RA       ++  +M   G QPNV TY+ +I +  R+
Sbjct: 241 SLKDR--FEPDVVVYTSLVHGWCRAGNISEAERVFGEMKMAGIQPNVYTYSIVIDALCRS 298

Query: 409 NYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTY 468
             +  A DVF +M  VGC+P+ +T+  L+ +H KAG  +  + +Y +M+  G  PD  TY
Sbjct: 299 GQITRAHDVFSEMIDVGCDPNAITFNNLMRVHVKAGRTEKVLQVYNQMKRLGCPPDAITY 358

Query: 469 SVIIN----------------------------------CLGKAGHLQAAHQLFCEMVNQ 494
           + +I                                   C+ K G + +AH++F +M + 
Sbjct: 359 NFLIESHCRDDNLEEAVKILNSVKKGCNLNASSFNPIFGCISKLGDVNSAHRMFAKMKDL 418

Query: 495 GCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEA 554
            C PN VTYNI++ + A  ++    LKL ++M     EP+  TY +++      G+ + A
Sbjct: 419 KCRPNTVTYNILMRMFADKKSTDMVLKLRKEMDENEIEPNANTYRVLISTFCGIGHWNNA 478

Query: 555 EAVFAEM-RRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGL--RP 603
            + F EM   K   P  PVY +++    KAG ++K  E  E M+  G   RP
Sbjct: 479 YSFFKEMIEEKCLRPSLPVYEMVLQQLRKAGQLKKHEELVEKMVNRGFVTRP 530


>gi|168004269|ref|XP_001754834.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162693938|gb|EDQ80288.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 504

 Score =  154 bits (390), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 100/387 (25%), Positives = 188/387 (48%), Gaps = 28/387 (7%)

Query: 284 LAPFSRHFASTGNVVESVS--RILRQWK-------W---GPLAEEALGNTNYSMDAYQAN 331
           L    R   +   ++E+V+  R LR W+       W   G + +  +G  N  +DAY  +
Sbjct: 37  LDALPRGIGTWEAIMENVAELRRLRNWRSVILILEWILQGTMFKPDVGCFNMLIDAYGKS 96

Query: 332 QVLKQLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGC 391
           +  ++ +     +  F  L         E ++  ++    R  Q     KL  +M     
Sbjct: 97  KQWREAEKTFHLMKDFQCL-------PTETSFNVLLAAYSRGVQLEKAEKLFHEMKESNY 149

Query: 392 QPNVV---------TYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAK 442
            P  V         TYN  +   G++  L++A D F+ MQ  G  P   T+  +I+I+ K
Sbjct: 150 SPGTVEWMIFSGIATYNTYLEVLGKSGRLSQAEDTFRDMQKQGILPAVNTFTIMINIYGK 209

Query: 443 AGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVT 502
           A + D A D+++ M+ A   P+ +TY+ ++N   + G+   A ++F E+ + G IP++ T
Sbjct: 210 AYYSDKADDLFRSMRKALCPPNLYTYTALMNAHAREGNCVRAEEIFAELQSVGFIPDVYT 269

Query: 503 YNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMR 562
           YN ++   ++  +   A ++++ M  AG  PD+V+Y+I+++  G  G   +A+AV+  M+
Sbjct: 270 YNALLEAYSRGEHPTGAKEVFQAMVEAGVRPDQVSYNILIDAFGRAGLTADAQAVYDSMK 329

Query: 563 RKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLS 622
              + P    + LL+  + KAG V +A      +  +G++P+    NSLLSA+   G++ 
Sbjct: 330 EAGFKPTMKSHMLLLSSYAKAGKVTEAERLVREIENSGVKPDTFMFNSLLSAYGNSGRID 389

Query: 623 DAYHLLQGMLNLGLKPSLQTYTLLLSC 649
           +   LL+ M++   KP + T   L++ 
Sbjct: 390 EMESLLESMVSSVAKPDISTLNTLINA 416



 Score =  153 bits (386), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 81/319 (25%), Positives = 163/319 (51%), Gaps = 5/319 (1%)

Query: 329 QANQVLKQLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVR 388
           +A ++  ++++   + G   W+           TY T + +LG++ +          M +
Sbjct: 136 KAEKLFHEMKESNYSPGTVEWM-----IFSGIATYNTYLEVLGKSGRLSQAEDTFRDMQK 190

Query: 389 DGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDV 448
            G  P V T+  +I+ YG+A Y ++A D+F+ M+   C P+  TY  L++ HA+ G    
Sbjct: 191 QGILPAVNTFTIMINIYGKAYYSDKADDLFRSMRKALCPPNLYTYTALMNAHAREGNCVR 250

Query: 449 AMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIA 508
           A +++ ++Q+ G  PD +TY+ ++    +  H   A ++F  MV  G  P+ V+YNI+I 
Sbjct: 251 AEEIFAELQSVGFIPDVYTYNALLEAYSRGEHPTGAKEVFQAMVEAGVRPDQVSYNILID 310

Query: 509 LQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVP 568
              +A     A  +Y  M+ AGF+P   ++ +++      G + EAE +  E+      P
Sbjct: 311 AFGRAGLTADAQAVYDSMKEAGFKPTMKSHMLLLSSYAKAGKVTEAERLVREIENSGVKP 370

Query: 569 DEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLL 628
           D  ++  L+  +G +G + +     E+M+ +  +P++ T N+L++A+ + G +  A  + 
Sbjct: 371 DTFMFNSLLSAYGNSGRIDEMESLLESMVSSVAKPDISTLNTLINAYAQGGYIEKAEEVF 430

Query: 629 QGMLNLGLKPSLQTYTLLL 647
             + + GL P + ++T L+
Sbjct: 431 NSLESKGLTPDVMSWTSLM 449



 Score =  148 bits (374), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 81/296 (27%), Positives = 151/296 (51%), Gaps = 3/296 (1%)

Query: 361 HTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQ 420
           +T+T M+ I G+A      + L   M +  C PN+ TY  L++++ R      A ++F +
Sbjct: 198 NTFTIMINIYGKAYYSDKADDLFRSMRKALCPPNLYTYTALMNAHAREGNCVRAEEIFAE 257

Query: 421 MQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGH 480
           +Q VG  PD  TY  L++ +++      A ++++ M  AG+ PD  +Y+++I+  G+AG 
Sbjct: 258 LQSVGFIPDVYTYNALLEAYSRGEHPTGAKEVFQAMVEAGVRPDQVSYNILIDAFGRAGL 317

Query: 481 LQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSI 540
              A  ++  M   G  P + ++ ++++  AKA     A +L R+++N+G +PD   ++ 
Sbjct: 318 TADAQAVYDSMKEAGFKPTMKSHMLLLSSYAKAGKVTEAERLVREIENSGVKPDTFMFNS 377

Query: 541 VMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAG 600
           ++   G+ G +DE E++   M      PD      L++ + + G + KA E + ++   G
Sbjct: 378 LLSAYGNSGRIDEMESLLESMVSSVAKPDISTLNTLINAYAQGGYIEKAEEVFNSLESKG 437

Query: 601 LRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSP 656
           L P+V +  SL+ A+ +         + Q M+  G  P   T  + LS C   RSP
Sbjct: 438 LTPDVMSWTSLMGAYAQRKLFRKCVSIFQKMVKAGCIPDRATAKVFLSSC---RSP 490



 Score =  114 bits (285), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 68/269 (25%), Positives = 126/269 (46%)

Query: 361 HTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQ 420
           +TYT ++    R        ++  ++   G  P+V TYN L+ +Y R  +   A +VF+ 
Sbjct: 233 YTYTALMNAHAREGNCVRAEEIFAELQSVGFIPDVYTYNALLEAYSRGEHPTGAKEVFQA 292

Query: 421 MQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGH 480
           M   G  PD+V+Y  LID   +AG    A  +Y  M+ AG  P   ++ ++++   KAG 
Sbjct: 293 MVEAGVRPDQVSYNILIDAFGRAGLTADAQAVYDSMKEAGFKPTMKSHMLLLSSYAKAGK 352

Query: 481 LQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSI 540
           +  A +L  E+ N G  P+   +N +++    +        L   M ++  +PD  T + 
Sbjct: 353 VTEAERLVREIENSGVKPDTFMFNSLLSAYGNSGRIDEMESLLESMVSSVAKPDISTLNT 412

Query: 541 VMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAG 600
           ++      GY+++AE VF  +  K   PD   +  L+  + +    RK    ++ M++AG
Sbjct: 413 LINAYAQGGYIEKAEEVFNSLESKGLTPDVMSWTSLMGAYAQRKLFRKCVSIFQKMVKAG 472

Query: 601 LRPNVPTCNSLLSAFLRVGQLSDAYHLLQ 629
             P+  T    LS+     Q+ +   +++
Sbjct: 473 CIPDRATAKVFLSSCRSPEQVKEVTDMIE 501



 Score =  111 bits (278), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 95/418 (22%), Positives = 180/418 (43%), Gaps = 66/418 (15%)

Query: 367 VGILGRARQFGAINKLLDQMVRDGC-QPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVG 425
           V  L R R + ++  +L+ +++    +P+V  +N LI +YG++    EA   F  M+   
Sbjct: 54  VAELRRLRNWRSVILILEWILQGTMFKPDVGCFNMLIDAYGKSKQWREAEKTFHLMKDFQ 113

Query: 426 CEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAH 485
           C P   ++  L+  +++   L+ A  ++ +M+ +  SP T  +                 
Sbjct: 114 CLPTETSFNVLLAAYSRGVQLEKAEKLFHEMKESNYSPGTVEW----------------- 156

Query: 486 QLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVL 545
                M+  G    + TYN  + +  K+     A   +RDMQ  G  P   T++I++ + 
Sbjct: 157 -----MIFSG----IATYNTYLEVLGKSGRLSQAEDTFRDMQKQGILPAVNTFTIMINIY 207

Query: 546 GHCGYLDE-----------------------------------AEAVFAEMRRKNWVPDE 570
           G   Y D+                                   AE +FAE++   ++PD 
Sbjct: 208 GKAYYSDKADDLFRSMRKALCPPNLYTYTALMNAHAREGNCVRAEEIFAELQSVGFIPDV 267

Query: 571 PVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQG 630
             Y  L++ + +  +   A E ++AM++AG+RP+  + N L+ AF R G  +DA  +   
Sbjct: 268 YTYNALLEAYSRGEHPTGAKEVFQAMVEAGVRPDQVSYNILIDAFGRAGLTADAQAVYDS 327

Query: 631 MLNLGLKPSLQTYTLLLSCCTEARSPYDMGFCHELMAVSGHPAHMFLLS--MPSPGPDGQ 688
           M   G KP+++++ LLLS   +A    +       +  SG     F+ +  + + G  G+
Sbjct: 328 MKEAGFKPTMKSHMLLLSSYAKAGKVTEAERLVREIENSGVKPDTFMFNSLLSAYGNSGR 387

Query: 689 NVRDHVGSFLEMMHSEDRESKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAV 746
              D + S LE M S   +     ++ +++   + G  E+A  V+     K + PD +
Sbjct: 388 --IDEMESLLESMVSSVAKPDISTLNTLINAYAQGGYIEKAEEVFNSLESKGLTPDVM 443



 Score =  103 bits (257), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 53/218 (24%), Positives = 110/218 (50%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           +  GF  D +TY  ++    R        ++   MV  G +P+ V+YN LI ++GRA   
Sbjct: 259 QSVGFIPDVYTYNALLEAYSRGEHPTGAKEVFQAMVEAGVRPDQVSYNILIDAFGRAGLT 318

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
            +A  V+  M+  G +P   ++  L+  +AKAG +  A  + ++++ +G+ PDTF ++ +
Sbjct: 319 ADAQAVYDSMKEAGFKPTMKSHMLLLSSYAKAGKVTEAERLVREIENSGVKPDTFMFNSL 378

Query: 472 INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF 531
           ++  G +G +     L   MV+    P++ T N +I   A+    + A +++  +++ G 
Sbjct: 379 LSAYGNSGRIDEMESLLESMVSSVAKPDISTLNTLINAYAQGGYIEKAEEVFNSLESKGL 438

Query: 532 EPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPD 569
            PD ++++ +M          +  ++F +M +   +PD
Sbjct: 439 TPDVMSWTSLMGAYAQRKLFRKCVSIFQKMVKAGCIPD 476



 Score = 90.1 bits (222), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 41/190 (21%), Positives = 100/190 (52%)

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
           +AG + D+ +Y  ++   GRA        + D M   G +P + ++  L+ SY +A  + 
Sbjct: 295 EAGVRPDQVSYNILIDAFGRAGLTADAQAVYDSMKEAGFKPTMKSHMLLLSSYAKAGKVT 354

Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
           EA  + ++++  G +PD   + +L+  +  +G +D    + + M ++   PD  T + +I
Sbjct: 355 EAERLVREIENSGVKPDTFMFNSLLSAYGNSGRIDEMESLLESMVSSVAKPDISTLNTLI 414

Query: 473 NCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFE 532
           N   + G+++ A ++F  + ++G  P+++++  ++   A+ + ++  + +++ M  AG  
Sbjct: 415 NAYAQGGYIEKAEEVFNSLESKGLTPDVMSWTSLMGAYAQRKLFRKCVSIFQKMVKAGCI 474

Query: 533 PDKVTYSIVM 542
           PD+ T  + +
Sbjct: 475 PDRATAKVFL 484



 Score = 80.9 bits (198), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 35/157 (22%), Positives = 84/157 (53%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           ++AGFK    ++  ++    +A +     +L+ ++   G +P+   +N L+ +YG +  +
Sbjct: 329 KEAGFKPTMKSHMLLLSSYAKAGKVTEAERLVREIENSGVKPDTFMFNSLLSAYGNSGRI 388

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
           +E   + + M     +PD  T  TLI+ +A+ G+++ A +++  +++ GL+PD  +++ +
Sbjct: 389 DEMESLLESMVSSVAKPDISTLNTLINAYAQGGYIEKAEEVFNSLESKGLTPDVMSWTSL 448

Query: 472 INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIA 508
           +    +    +    +F +MV  GCIP+  T  + ++
Sbjct: 449 MGAYAQRKLFRKCVSIFQKMVKAGCIPDRATAKVFLS 485


>gi|15221691|ref|NP_176501.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75169915|sp|Q9CAN0.1|PPR99_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g63130, mitochondrial; Flags: Precursor
 gi|12323261|gb|AAG51613.1|AC010795_17 unknown protein; 64081-65973 [Arabidopsis thaliana]
 gi|22136016|gb|AAM91590.1| unknown protein [Arabidopsis thaliana]
 gi|23197834|gb|AAN15444.1| unknown protein [Arabidopsis thaliana]
 gi|332195938|gb|AEE34059.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 630

 Score =  154 bits (390), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 107/399 (26%), Positives = 184/399 (46%)

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
           + G++ D  T  +++       +      L+ QMV  G QP+  T+N LIH   R N  +
Sbjct: 144 KLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRAS 203

Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
           EA+ +  +M V GC+PD VTY  +++   K G +D+A+ + KKM+   + P    Y+ II
Sbjct: 204 EAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTII 263

Query: 473 NCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFE 532
           + L    ++  A  LF EM N+G  PN+VTYN +I        +  A +L  DM      
Sbjct: 264 DALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKIN 323

Query: 533 PDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEW 592
           P+ VT+S +++     G L EAE ++ EM +++  PD   Y  L++ +     + +A   
Sbjct: 324 PNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHM 383

Query: 593 YEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTE 652
           +E M+     PNV T N+L+  F +  ++ +   L + M   GL  +  TYT L+    +
Sbjct: 384 FELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQ 443

Query: 653 ARSPYDMGFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRESKRGL 712
           AR   +     + M   G    +   S+   G       +      E +     E     
Sbjct: 444 ARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYT 503

Query: 713 VDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAVKEKGM 751
            + +++ + K+G  E+   ++   + K V P+ V    M
Sbjct: 504 YNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTM 542



 Score =  147 bits (371), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 92/323 (28%), Positives = 147/323 (45%), Gaps = 14/323 (4%)

Query: 363 YTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQ 422
           Y T++  L   +       L  +M   G +PNVVTYN LI         ++A  +   M 
Sbjct: 259 YNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMI 318

Query: 423 VVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQ 482
                P+ VT+  LID   K G L  A  +Y +M    + PD FTYS +IN       L 
Sbjct: 319 ERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLD 378

Query: 483 AAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVM 542
            A  +F  M+++ C PN+VTYN +I    KA+     ++L+R+M   G   + VTY+ ++
Sbjct: 379 EAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLI 438

Query: 543 EVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLR 602
                    D A+ VF +M     +PD   Y +L+D     G V  A   +E + ++ + 
Sbjct: 439 HGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKME 498

Query: 603 PNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGFC 662
           P++ T N ++    + G++ D + L   +   G+KP++ TYT ++S           GFC
Sbjct: 499 PDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMS-----------GFC 547

Query: 663 HELMAVSGHPAHMFLLSMPSPGP 685
            + +      A      M   GP
Sbjct: 548 RKGLK---EEADALFREMKEEGP 567



 Score =  143 bits (360), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 90/305 (29%), Positives = 155/305 (50%), Gaps = 1/305 (0%)

Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLI 402
           AL  F  +  + G + +  TY +++  L    ++   ++LL  M+     PNVVT++ LI
Sbjct: 275 ALNLFTEMDNK-GIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALI 333

Query: 403 HSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLS 462
            ++ +   L EA  ++ +M     +PD  TY +LI+       LD A  M++ M +    
Sbjct: 334 DAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCF 393

Query: 463 PDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKL 522
           P+  TY+ +I    KA  +    +LF EM  +G + N VTY  +I    +AR   +A  +
Sbjct: 394 PNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIV 453

Query: 523 YRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGK 582
           ++ M + G  PD +TYSI+++ L + G ++ A  VF  ++R    PD   Y ++++   K
Sbjct: 454 FKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCK 513

Query: 583 AGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQT 642
           AG V   W+ + ++   G++PNV T  +++S F R G   +A  L + M   G  P   T
Sbjct: 514 AGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGT 573

Query: 643 YTLLL 647
           Y  L+
Sbjct: 574 YNTLI 578



 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 89/317 (28%), Positives = 155/317 (48%), Gaps = 15/317 (4%)

Query: 363 YTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQ 422
           ++ ++  + +  +F  +  L +QM   G   N+ TY+ LI+ + R + L+ AL V  +M 
Sbjct: 84  FSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSILINCFCRRSQLSLALAVLAKMM 143

Query: 423 VVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQ 482
            +G EPD VT  +L++       +  A+ +  +M   G  PD+FT++ +I+ L +     
Sbjct: 144 KLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRAS 203

Query: 483 AAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVM 542
            A  L   MV +GC P+LVTY I++    K  +   AL L + M+    EP  V Y+ ++
Sbjct: 204 EAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTII 263

Query: 543 EVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLR 602
           + L +   +++A  +F EM  K   P+   Y  L+      G    A      M++  + 
Sbjct: 264 DALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKIN 323

Query: 603 PNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGFC 662
           PNV T ++L+ AF++ G+L +A  L   M+   + P + TY+ L++           GFC
Sbjct: 324 PNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLIN-----------GFC 372

Query: 663 -HELMAVSGHPAHMFLL 678
            H+ +       HMF L
Sbjct: 373 MHDRL---DEAKHMFEL 386



 Score =  127 bits (318), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 73/270 (27%), Positives = 143/270 (52%)

Query: 362 TYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQM 421
           T++ ++    +  +     KL D+M++    P++ TY+ LI+ +   + L+EA  +F+ M
Sbjct: 328 TFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELM 387

Query: 422 QVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHL 481
               C P+ VTY TLI    KA  +D  M+++++M   GL  +T TY+ +I+   +A   
Sbjct: 388 ISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQAREC 447

Query: 482 QAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIV 541
             A  +F +MV+ G +P+++TY+I++         ++AL ++  +Q +  EPD  TY+I+
Sbjct: 448 DNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIM 507

Query: 542 MEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGL 601
           +E +   G +++   +F  +  K   P+   Y  ++  + + G   +A   +  M + G 
Sbjct: 508 IEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGP 567

Query: 602 RPNVPTCNSLLSAFLRVGQLSDAYHLLQGM 631
            P+  T N+L+ A LR G  + +  L++ M
Sbjct: 568 LPDSGTYNTLIRAHLRDGDKAASAELIREM 597



 Score =  124 bits (312), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 97/363 (26%), Positives = 162/363 (44%), Gaps = 15/363 (4%)

Query: 349 WLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRA 408
           W+R  +G ++D    +  +  L   +   A+N L   MV+    P++V +++L+ +  + 
Sbjct: 38  WVRDFSGVRYDYRKIS--INRLNDLKLDDAVN-LFGDMVKSRPFPSIVEFSKLLSAIAKM 94

Query: 409 NYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTY 468
           N  +  + + +QMQ +G   +  TY  LI+   +   L +A+ +  KM   G  PD  T 
Sbjct: 95  NKFDLVISLGEQMQNLGISHNLYTYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTL 154

Query: 469 SVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQN 528
           + ++N       +  A  L  +MV  G  P+  T+N +I    +      A+ L   M  
Sbjct: 155 NSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVV 214

Query: 529 AGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRK 588
            G +PD VTY IV+  L   G +D A ++  +M +    P   +Y  ++D      NV  
Sbjct: 215 KGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVND 274

Query: 589 AWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
           A   +  M   G+RPNV T NSL+      G+ SDA  LL  M+   + P++ T++ L+ 
Sbjct: 275 ALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALID 334

Query: 649 C------CTEARSPYDMGFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMH 702
                    EA   YD     E++  S  P  +F  S    G    +  D      E+M 
Sbjct: 335 AFVKEGKLVEAEKLYD-----EMIKRSIDP-DIFTYSSLINGFCMHDRLDEAKHMFELMI 388

Query: 703 SED 705
           S+D
Sbjct: 389 SKD 391



 Score = 96.3 bits (238), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 60/202 (29%), Positives = 105/202 (51%), Gaps = 1/202 (0%)

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
           Q G   +  TYTT++    +AR+      +  QMV DG  P+++TY+ L+        + 
Sbjct: 424 QRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVE 483

Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
            AL VF+ +Q    EPD  TY  +I+   KAG ++   D++  +   G+ P+  TY+ ++
Sbjct: 484 TALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMM 543

Query: 473 NCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFE 532
           +   + G  + A  LF EM  +G +P+  TYN +I    +  +  ++ +L R+M++  F 
Sbjct: 544 SGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCRFV 603

Query: 533 PDKVTYSIVMEVLGHCGYLDEA 554
            D  T  +V  +L H G LD++
Sbjct: 604 GDASTIGLVTNML-HDGRLDKS 624


>gi|302794007|ref|XP_002978768.1| hypothetical protein SELMODRAFT_109608 [Selaginella moellendorffii]
 gi|300153577|gb|EFJ20215.1| hypothetical protein SELMODRAFT_109608 [Selaginella moellendorffii]
          Length = 713

 Score =  154 bits (390), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 108/389 (27%), Positives = 183/389 (47%), Gaps = 13/389 (3%)

Query: 265 ECVSERFSKPSREMKIPAGLA--PFSRHFASTGNVVESVSRILRQWKWGPLAEEAL-GNT 321
           E     F K   E  +P G+      + +   GN+ E+V  +L Q     + EE   GN 
Sbjct: 218 EAAEHWFEKFKAENLVPGGIVYNSIVQAYCQAGNM-ETVEALLAQ-----MEEEGFQGNL 271

Query: 322 NYSMDAYQANQVLKQLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINK 381
                         +++D    L FF+ L+   G      TY  +V +  +A        
Sbjct: 272 GLYTTVLNG---FAEIRDEEKCLSFFHRLK-ACGLSPTAATYGCIVKLFTKAGNMAKALD 327

Query: 382 LLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHA 441
           +L++M + G  PN + Y  ++  Y R      A  V++ M   G +PD VTY  L+    
Sbjct: 328 ILEEMDKHGVSPNKMIYAMIMDGYARGGDFTAAFKVWEDMVSAGLKPDIVTYNILVHAFC 387

Query: 442 KAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLV 501
           KAG +D A+ + + +QA  L P   TY+ I++   K GH+Q A ++F  +   G  P +V
Sbjct: 388 KAGRMDKALGVLENIQANRLLPTIETYTSILDGYVKGGHIQKALEVFDRIKTAGLRPGVV 447

Query: 502 TYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEM 561
           +YN +++  AKAR  ++A  +  +M   G  P++ +Y+ + E     G +++A  +F  M
Sbjct: 448 SYNSLLSGLAKARQMENARLMLDEMLANGVVPNERSYTALTEGYARAGDVEKAFGMFQRM 507

Query: 562 RRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQL 621
           +++N   D   YG L+    K+G +++A E ++ +  AGL+ N  T  ++L  + R G+L
Sbjct: 508 KKENLAIDIVAYGALLKACCKSGAMQRAVEVFQQITDAGLKHNRITYCTMLDGWARKGEL 567

Query: 622 SDAYHLLQGMLNLGLKPSLQTYTLLLSCC 650
           S A  LL+ M   G       YT  +  C
Sbjct: 568 SKARDLLKDMQKHGFHLDTICYTSFIKAC 596



 Score =  139 bits (350), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 79/292 (27%), Positives = 150/292 (51%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           G + +E  + +++     A    A     ++   +   P  + YN ++ +Y +A  +   
Sbjct: 196 GIQLNEAVFCSIISGYASAGNNEAAEHWFEKFKAENLVPGGIVYNSIVQAYCQAGNMETV 255

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
             +  QM+  G + +   Y T+++  A+    +  +  + +++A GLSP   TY  I+  
Sbjct: 256 EALLAQMEEEGFQGNLGLYTTVLNGFAEIRDEEKCLSFFHRLKACGLSPTAATYGCIVKL 315

Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPD 534
             KAG++  A  +  EM   G  PN + Y +++   A+  ++ +A K++ DM +AG +PD
Sbjct: 316 FTKAGNMAKALDILEEMDKHGVSPNKMIYAMIMDGYARGGDFTAAFKVWEDMVSAGLKPD 375

Query: 535 KVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYE 594
            VTY+I++      G +D+A  V   ++    +P    Y  ++D + K G+++KA E ++
Sbjct: 376 IVTYNILVHAFCKAGRMDKALGVLENIQANRLLPTIETYTSILDGYVKGGHIQKALEVFD 435

Query: 595 AMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLL 646
            +  AGLRP V + NSLLS   +  Q+ +A  +L  ML  G+ P+ ++YT L
Sbjct: 436 RIKTAGLRPGVVSYNSLLSGLAKARQMENARLMLDEMLANGVVPNERSYTAL 487



 Score =  133 bits (335), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 73/285 (25%), Positives = 142/285 (49%)

Query: 363 YTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQ 422
           Y  +V    R     A     + M     +PNV  Y  LIH+Y  A  +  A+   ++M 
Sbjct: 134 YGLLVDFYARHGDKVAARATFEAMRASHIKPNVHIYTSLIHAYAEARDMEGAVACTEEML 193

Query: 423 VVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQ 482
             G + +   +C++I  +A AG  + A   ++K +A  L P    Y+ I+    +AG+++
Sbjct: 194 SQGIQLNEAVFCSIISGYASAGNNEAAEHWFEKFKAENLVPGGIVYNSIVQAYCQAGNME 253

Query: 483 AAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVM 542
               L  +M  +G   NL  Y  ++   A+ R+ +  L  +  ++  G  P   TY  ++
Sbjct: 254 TVEALLAQMEEEGFQGNLGLYTTVLNGFAEIRDEEKCLSFFHRLKACGLSPTAATYGCIV 313

Query: 543 EVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLR 602
           ++    G + +A  +  EM +    P++ +Y +++D + + G+   A++ +E M+ AGL+
Sbjct: 314 KLFTKAGNMAKALDILEEMDKHGVSPNKMIYAMIMDGYARGGDFTAAFKVWEDMVSAGLK 373

Query: 603 PNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
           P++ T N L+ AF + G++  A  +L+ +    L P+++TYT +L
Sbjct: 374 PDIVTYNILVHAFCKAGRMDKALGVLENIQANRLLPTIETYTSIL 418



 Score =  133 bits (334), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 79/316 (25%), Positives = 150/316 (47%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           G   ++  Y  ++    R   F A  K+ + MV  G +P++VTYN L+H++ +A  +++A
Sbjct: 336 GVSPNKMIYAMIMDGYARGGDFTAAFKVWEDMVSAGLKPDIVTYNILVHAFCKAGRMDKA 395

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
           L V + +Q     P   TY +++D + K G +  A++++ +++ AGL P   +Y+ +++ 
Sbjct: 396 LGVLENIQANRLLPTIETYTSILDGYVKGGHIQKALEVFDRIKTAGLRPGVVSYNSLLSG 455

Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPD 534
           L KA  ++ A  +  EM+  G +PN  +Y  +    A+A + + A  +++ M+      D
Sbjct: 456 LAKARQMENARLMLDEMLANGVVPNERSYTALTEGYARAGDVEKAFGMFQRMKKENLAID 515

Query: 535 KVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYE 594
            V Y  +++     G +  A  VF ++       +   Y  ++D W + G + KA +  +
Sbjct: 516 IVAYGALLKACCKSGAMQRAVEVFQQITDAGLKHNRITYCTMLDGWARKGELSKARDLLK 575

Query: 595 AMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEAR 654
            M + G   +     S + A  R G   +    L  M    L+ + +TYT L+     A 
Sbjct: 576 DMQKHGFHLDTICYTSFIKACFRSGDTEEVTETLAVMREKKLEVNARTYTTLIHGWLAAA 635

Query: 655 SPYDMGFCHELMAVSG 670
            P     C+E    SG
Sbjct: 636 DPDQAISCYEQAKASG 651



 Score =  107 bits (266), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 71/258 (27%), Positives = 119/258 (46%), Gaps = 3/258 (1%)

Query: 362 TYTTMVGILGRARQFGAINKLL---DQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVF 418
           T  T   IL    + G I K L   D++   G +P VV+YN L+    +A  +  A  + 
Sbjct: 410 TIETYTSILDGYVKGGHIQKALEVFDRIKTAGLRPGVVSYNSLLSGLAKARQMENARLML 469

Query: 419 KQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKA 478
            +M   G  P+  +Y  L + +A+AG ++ A  M+++M+   L+ D   Y  ++    K+
Sbjct: 470 DEMLANGVVPNERSYTALTEGYARAGDVEKAFGMFQRMKKENLAIDIVAYGALLKACCKS 529

Query: 479 GHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTY 538
           G +Q A ++F ++ + G   N +TY  M+   A+      A  L +DMQ  GF  D + Y
Sbjct: 530 GAMQRAVEVFQQITDAGLKHNRITYCTMLDGWARKGELSKARDLLKDMQKHGFHLDTICY 589

Query: 539 SIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQ 598
           +  ++     G  +E     A MR K    +   Y  L+  W  A +  +A   YE    
Sbjct: 590 TSFIKACFRSGDTEEVTETLAVMREKKLEVNARTYTTLIHGWLAAADPDQAISCYEQAKA 649

Query: 599 AGLRPNVPTCNSLLSAFL 616
           +GL+ +    N LLS  +
Sbjct: 650 SGLQLDSALSNCLLSGLI 667



 Score = 78.6 bits (192), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 63/272 (23%), Positives = 111/272 (40%), Gaps = 49/272 (18%)

Query: 325 MDAYQANQVLKQLQDHTV-------------ALGFFNWLRRQAGFKHDEHTYTTMVGILG 371
           ++  QAN++L  ++ +T              AL  F+ ++  AG +    +Y +++  L 
Sbjct: 399 LENIQANRLLPTIETYTSILDGYVKGGHIQKALEVFDRIK-TAGLRPGVVSYNSLLSGLA 457

Query: 372 RARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRAN---------------------- 409
           +ARQ      +LD+M+ +G  PN  +Y  L   Y RA                       
Sbjct: 458 KARQMENARLMLDEMLANGVVPNERSYTALTEGYARAGDVEKAFGMFQRMKKENLAIDIV 517

Query: 410 -------------YLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKM 456
                         +  A++VF+Q+   G + +R+TYCT++D  A+ G L  A D+ K M
Sbjct: 518 AYGALLKACCKSGAMQRAVEVFQQITDAGLKHNRITYCTMLDGWARKGELSKARDLLKDM 577

Query: 457 QAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNY 516
           Q  G   DT  Y+  I    ++G  +   +    M  +    N  TY  +I     A + 
Sbjct: 578 QKHGFHLDTICYTSFIKACFRSGDTEEVTETLAVMREKKLEVNARTYTTLIHGWLAAADP 637

Query: 517 QSALKLYRDMQNAGFEPDKVTYSIVMEVLGHC 548
             A+  Y   + +G + D    + ++  L  C
Sbjct: 638 DQAISCYEQAKASGLQLDSALSNCLLSGLISC 669


>gi|449462477|ref|XP_004148967.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Cucumis sativus]
          Length = 597

 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 118/495 (23%), Positives = 230/495 (46%), Gaps = 35/495 (7%)

Query: 334 LKQLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQP 393
           L +++ ++     +N +R  +G   D  T   ++  L    + G    ++  ++R G  P
Sbjct: 106 LAKIKHYSQVFYLYNQMRL-SGISPDCCTLNILLNCLCNVNRVGEGLAVMAGILRRGYIP 164

Query: 394 NVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMY 453
           ++VTY  LI      + +++A  +F +MQ +GC P+ +TY TL+    + G + +A+ ++
Sbjct: 165 DIVTYTTLIKGLCMEHRISKAALLFTRMQKLGCTPNAITYGTLMKGLCRTGNISIALKLH 224

Query: 454 KKM------QAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMI 507
           ++M            P   +YS+II+ L K      A  LF EM  QG  P +++Y  ++
Sbjct: 225 QEMLNDSSLYGINFKPVVISYSIIIDALCKDRREDEARDLFEEMKVQGMTPTVISYTSLM 284

Query: 508 ALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWV 567
                   ++ A +L+ +M N G +P+ VT++++++VL   G + EA+ +   M ++  V
Sbjct: 285 --------WEEAKRLFNEMVNQGVQPNVVTFNVLIDVLCKEGKVIEAKDLLEVMIQRGIV 336

Query: 568 PDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHL 627
           P+   Y  L++ +   G++  A E + +M   G  P+V     L++ + +  ++ +A  L
Sbjct: 337 PNLLTYNSLIEGFCLVGDLNSARELFVSMPSKGCEPDVICYTVLINGYCKTSKVEEAMKL 396

Query: 628 LQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGFCHELMAVSGHPAHMFLLSMPSPGPDG 687
             GML +G +P ++TY  LL+   +     D      +M V G P  +++  +   G   
Sbjct: 397 YNGMLQVGKRPDVKTYGALLTGLFQGGKVGDAKKLFGVMKVYGIPGDLYIYGIFLNGLCK 456

Query: 688 QNVRDHVGSFLEMMHSEDRESKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAVK 747
                        + S + +      + ++D L K+G  E A  ++E   Q+ + PD V 
Sbjct: 457 NGCLFEAMELFNKLKSYNIKLDIECFNCLIDGLCKAGKLETAWELFEKLPQEELQPDVVT 516

Query: 748 EKGMSYWLINLHVMSDGTAVIALSRTLAWFRKQMLISGVGPSRI---DIVTGWGRRSRVT 804
                 + I +H    G  V+   +    F+K M  +G  P +I    ++ G+    ++ 
Sbjct: 517 ------YNIMIHEFCRGGQVV---KANILFQK-MEKNGCTPDKITYATLIRGFFESKKL- 565

Query: 805 GTSLVRQAVQELLHM 819
                 + V ELLHM
Sbjct: 566 ------EKVVELLHM 574



 Score =  102 bits (255), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 62/246 (25%), Positives = 117/246 (47%)

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
           Q G   +  TY +++          +  +L   M   GC+P+V+ Y  LI+ Y + + + 
Sbjct: 332 QRGIVPNLLTYNSLIEGFCLVGDLNSARELFVSMPSKGCEPDVICYTVLINGYCKTSKVE 391

Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
           EA+ ++  M  VG  PD  TY  L+    + G +  A  ++  M+  G+  D + Y + +
Sbjct: 392 EAMKLYNGMLQVGKRPDVKTYGALLTGLFQGGKVGDAKKLFGVMKVYGIPGDLYIYGIFL 451

Query: 473 NCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFE 532
           N L K G L  A +LF ++ +     ++  +N +I    KA   ++A +L+  +     +
Sbjct: 452 NGLCKNGCLFEAMELFNKLKSYNIKLDIECFNCLIDGLCKAGKLETAWELFEKLPQEELQ 511

Query: 533 PDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEW 592
           PD VTY+I++      G + +A  +F +M +    PD+  Y  L+  + ++  + K  E 
Sbjct: 512 PDVVTYNIMIHEFCRGGQVVKANILFQKMEKNGCTPDKITYATLIRGFFESKKLEKVVEL 571

Query: 593 YEAMLQ 598
              M+Q
Sbjct: 572 LHMMVQ 577



 Score = 84.3 bits (207), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 69/282 (24%), Positives = 120/282 (42%), Gaps = 18/282 (6%)

Query: 473 NCLGKAGHLQA--AHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAG 530
           NC  K G++ A  A Q F  M+     P L ++  +++  AK ++Y     LY  M+ +G
Sbjct: 69  NC--KTGNITAIQAFQFFHLMMYSNPTPPLSSFTHLLSGLAKIKHYSQVFYLYNQMRLSG 126

Query: 531 FEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAW 590
             PD  T +I++  L +   + E  AV A + R+ ++PD   Y  L+        + KA 
Sbjct: 127 ISPDCCTLNILLNCLCNVNRVGEGLAVMAGILRRGYIPDIVTYTTLIKGLCMEHRISKAA 186

Query: 591 EWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLN------LGLKPSLQTYT 644
             +  M + G  PN  T  +L+    R G +S A  L Q MLN      +  KP + +Y+
Sbjct: 187 LLFTRMQKLGCTPNAITYGTLMKGLCRTGNISIALKLHQEMLNDSSLYGINFKPVVISYS 246

Query: 645 LLLSCCTEARSPYDMGFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSE 704
           +++    + R   +     E M V G          P+       + +        M ++
Sbjct: 247 IIIDALCKDRREDEARDLFEEMKVQGMT--------PTVISYTSLMWEEAKRLFNEMVNQ 298

Query: 705 DRESKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAV 746
             +      + ++D L K G   EA  + EV  Q+ + P+ +
Sbjct: 299 GVQPNVVTFNVLIDVLCKEGKVIEAKDLLEVMIQRGIVPNLL 340



 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 35/123 (28%), Positives = 66/123 (53%), Gaps = 1/123 (0%)

Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLI 402
           A+  FN L+     K D   +  ++  L +A +     +L +++ ++  QP+VVTYN +I
Sbjct: 463 AMELFNKLK-SYNIKLDIECFNCLIDGLCKAGKLETAWELFEKLPQEELQPDVVTYNIMI 521

Query: 403 HSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLS 462
           H + R   + +A  +F++M+  GC PD++TY TLI    ++  L+  +++   M    +S
Sbjct: 522 HEFCRGGQVVKANILFQKMEKNGCTPDKITYATLIRGFFESKKLEKVVELLHMMVQRDVS 581

Query: 463 PDT 465
            D 
Sbjct: 582 LDV 584



 Score = 48.1 bits (113), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 34/141 (24%), Positives = 68/141 (48%), Gaps = 2/141 (1%)

Query: 355 GFKHDEHTYTTMV-GILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNE 413
           G   D + Y   + G+      F A+ +L +++     + ++  +N LI    +A  L  
Sbjct: 439 GIPGDLYIYGIFLNGLCKNGCLFEAM-ELFNKLKSYNIKLDIECFNCLIDGLCKAGKLET 497

Query: 414 ALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIIN 473
           A ++F+++     +PD VTY  +I    + G +  A  +++KM+  G +PD  TY+ +I 
Sbjct: 498 AWELFEKLPQEELQPDVVTYNIMIHEFCRGGQVVKANILFQKMEKNGCTPDKITYATLIR 557

Query: 474 CLGKAGHLQAAHQLFCEMVNQ 494
              ++  L+   +L   MV +
Sbjct: 558 GFFESKKLEKVVELLHMMVQR 578


>gi|125544564|gb|EAY90703.1| hypothetical protein OsI_12306 [Oryza sativa Indica Group]
          Length = 644

 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 98/334 (29%), Positives = 159/334 (47%), Gaps = 2/334 (0%)

Query: 316 EALGNTNYSMDAYQANQVLKQLQDHTVALGFFNWLRRQA--GFKHDEHTYTTMVGILGRA 373
           EA+     ++D    N VL  + +          LR+ A  G + D  +Y  ++  L  A
Sbjct: 170 EAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMA 229

Query: 374 RQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTY 433
           +++G + +L+D+MVR  C PN+VT+N LI    R        +V  QM   GC PD   Y
Sbjct: 230 KRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMY 289

Query: 434 CTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVN 493
            T+ID   K G L+VA ++  +M + GL P+   Y+ ++  L  A   + A +L  EM  
Sbjct: 290 ATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQ 349

Query: 494 QGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDE 553
           + C  + VT+NI++    +       ++L   M + G  PD +TY+ V+      G +DE
Sbjct: 350 KDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDE 409

Query: 554 AEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLS 613
           A  +   M      P+   Y +++     AG    A E    M+Q G  PN  T N+L++
Sbjct: 410 AVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLIN 469

Query: 614 AFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
              + G +  A  LL+ ML  G  P L +Y+ ++
Sbjct: 470 FLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVI 503



 Score =  148 bits (373), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 82/293 (27%), Positives = 150/293 (51%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           G K +   Y T++  L  A ++    +LL +M +  C  + VT+N L+  + +   ++  
Sbjct: 316 GLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRV 375

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
           +++ +QM   GC PD +TY T+I+   K G +D A+ + K M + G  P+T +Y++++  
Sbjct: 376 IELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKG 435

Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPD 534
           L  AG    A +L  +M+ QGC PN VT+N +I    K    + A++L + M   G  PD
Sbjct: 436 LCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPD 495

Query: 535 KVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYE 594
            ++YS V++ LG  G  +EA  +   M  K   P+  +Y  +     + G V K  + ++
Sbjct: 496 LISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQMFD 555

Query: 595 AMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
            +    +R +    N+++S+  +  +   A      M++ G  P+  TYT+L+
Sbjct: 556 NIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTMLI 608



 Score =  133 bits (335), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 82/320 (25%), Positives = 147/320 (45%), Gaps = 14/320 (4%)

Query: 329 QANQVLKQLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVR 388
           + ++VL Q+ +H              G   D   Y T++  + +       N++L++M  
Sbjct: 269 RVHEVLAQMSEH--------------GCTPDIRMYATIIDGICKEGHLEVANEILNRMPS 314

Query: 389 DGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDV 448
            G +PNVV YN ++     A    EA ++  +M    C  D VT+  L+D   + G +D 
Sbjct: 315 YGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDR 374

Query: 449 AMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIA 508
            +++ ++M + G  PD  TY+ +IN   K G +  A  L   M + GC PN V+Y I++ 
Sbjct: 375 VIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLK 434

Query: 509 LQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVP 568
               A  +  A +L   M   G  P+ VT++ ++  L   G +++A  +  +M      P
Sbjct: 435 GLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSP 494

Query: 569 DEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLL 628
           D   Y  ++D  GKAG   +A E    M+  G+ PN    +S+  A  R G+++    + 
Sbjct: 495 DLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQMF 554

Query: 629 QGMLNLGLKPSLQTYTLLLS 648
             + +  ++     Y  ++S
Sbjct: 555 DNIKDTTIRSDAVLYNAVIS 574



 Score =  125 bits (313), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 73/277 (26%), Positives = 136/277 (49%)

Query: 359 DEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVF 418
           D+ T+  +V    +      + +LL+QM+  GC P+V+TY  +I+ + +   ++EA+ + 
Sbjct: 355 DDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLL 414

Query: 419 KQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKA 478
           K M   GC+P+ V+Y  ++     AG    A ++  +M   G  P+  T++ +IN L K 
Sbjct: 415 KSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKK 474

Query: 479 GHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTY 538
           G ++ A +L  +M+  GC P+L++Y+ +I    KA   + AL+L   M N G  P+ + Y
Sbjct: 475 GLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIY 534

Query: 539 SIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQ 598
           S +   L   G +++   +F  ++      D  +Y  ++    K     +A +++  M+ 
Sbjct: 535 SSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVS 594

Query: 599 AGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLG 635
            G  PN  T   L+      G   +A  LL  + + G
Sbjct: 595 NGCMPNESTYTMLIKGLASEGLAKEAQELLSELCSRG 631



 Score =  118 bits (295), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 68/267 (25%), Positives = 130/267 (48%)

Query: 382 LLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHA 441
           LL ++   GC+ ++V+YN ++     A    +  ++  +M  V C P+ VT+ TLI    
Sbjct: 203 LLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLC 262

Query: 442 KAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLV 501
           + G  +   ++  +M   G +PD   Y+ II+ + K GHL+ A+++   M + G  PN+V
Sbjct: 263 RNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVV 322

Query: 502 TYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEM 561
            YN ++     A  ++ A +L  +M       D VT++I+++     G +D    +  +M
Sbjct: 323 CYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQM 382

Query: 562 RRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQL 621
                +PD   Y  +++ + K G + +A    ++M   G +PN  +   +L      G+ 
Sbjct: 383 LSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRW 442

Query: 622 SDAYHLLQGMLNLGLKPSLQTYTLLLS 648
            DA  L+  M+  G  P+  T+  L++
Sbjct: 443 VDAEELMSQMIQQGCPPNPVTFNTLIN 469



 Score =  116 bits (290), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 96/424 (22%), Positives = 178/424 (41%), Gaps = 37/424 (8%)

Query: 359 DEHTYTTMV-GILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDV 417
           + +T+  +V G+  R R   A+ ++LD+M   GC P    Y+ ++ +  R+     ++ V
Sbjct: 110 NAYTFFPVVRGLCTRGRIADAL-EVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRV 168

Query: 418 FKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGK 477
            + M   GC  D      +++   + G +D A+ + +K+   G   D  +Y+ ++  L  
Sbjct: 169 LEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCM 228

Query: 478 AGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVT 537
           A       +L  EMV   C PN+VT+N +I    +   ++   ++   M   G  PD   
Sbjct: 229 AKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRM 288

Query: 538 YSIVMEVLGHCGYLD-----------------------------------EAEAVFAEMR 562
           Y+ +++ +   G+L+                                   EAE + +EM 
Sbjct: 289 YATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMF 348

Query: 563 RKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLS 622
           +K+   D+  + +LVD + + G V +  E  E ML  G  P+V T  ++++ F + G + 
Sbjct: 349 QKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLID 408

Query: 623 DAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGFCHELMAVSGHPAHMFLLSMPS 682
           +A  LL+ M + G KP+  +YT++L     A    D       M   G P +    +   
Sbjct: 409 EAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLI 468

Query: 683 PGPDGQNVRDHVGSFLEMMHSEDRESKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVY 742
                + + +     L+ M              V+D L K+G  EEA  +  V   K + 
Sbjct: 469 NFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGIS 528

Query: 743 PDAV 746
           P+ +
Sbjct: 529 PNTI 532



 Score =  110 bits (274), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 63/208 (30%), Positives = 112/208 (53%)

Query: 354 AGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNE 413
            G K +  +YT ++  L  A ++    +L+ QM++ GC PN VT+N LI+   +   + +
Sbjct: 420 CGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQ 479

Query: 414 ALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIIN 473
           A+++ KQM V GC PD ++Y T+ID   KAG  + A+++   M   G+SP+T  YS I  
Sbjct: 480 AIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIAC 539

Query: 474 CLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEP 533
            L + G +    Q+F  + +     + V YN +I+   K      A+  +  M + G  P
Sbjct: 540 ALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGCMP 599

Query: 534 DKVTYSIVMEVLGHCGYLDEAEAVFAEM 561
           ++ TY+++++ L   G   EA+ + +E+
Sbjct: 600 NESTYTMLIKGLASEGLAKEAQELLSEL 627



 Score = 94.7 bits (234), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 99/463 (21%), Positives = 178/463 (38%), Gaps = 76/463 (16%)

Query: 393 PNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDM 452
           PN  T+  ++        + +AL+V  +M   GC P    Y  +++   ++G    ++ +
Sbjct: 109 PNAYTFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRV 168

Query: 453 YKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAK 512
            + M A G + DT   ++++N + + G +  A  L  ++   GC  ++V+YN ++     
Sbjct: 169 LEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCM 228

Query: 513 ARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPV 572
           A+ +    +L  +M      P+ VT++ ++  L   G  +    V A+M      PD  +
Sbjct: 229 AKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRM 288

Query: 573 YGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSA------------------ 614
           Y  ++D   K G++  A E    M   GL+PNV   N++L                    
Sbjct: 289 YATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMF 348

Query: 615 -----------------FLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPY 657
                            F + G +     LL+ ML+ G  P + TYT +++         
Sbjct: 349 QKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVIN--------- 399

Query: 658 DMGFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHV--------GSFLEMMHSEDRESK 709
             GFC E +      A M L SM S G     V   +        G +++      +  +
Sbjct: 400 --GFCKEGLI---DEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQ 454

Query: 710 RGL------VDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAVKEKGMSYWLINLHVMSD 763
           +G        + +++FL K GL E+A  + +        PD          LI+   + D
Sbjct: 455 QGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPD----------LISYSTVID 504

Query: 764 GTAVIALSRTLAWFRKQMLISGVGPSRI---DIVTGWGRRSRV 803
           G      +         M+  G+ P+ I    I     R  RV
Sbjct: 505 GLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREGRV 547



 Score = 78.2 bits (191), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 45/178 (25%), Positives = 87/178 (48%)

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
           Q G   +  T+ T++  L +        +LL QM+ +GC P++++Y+ +I   G+A    
Sbjct: 454 QQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTE 513

Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
           EAL++   M   G  P+ + Y ++    ++ G ++  + M+  ++   +  D   Y+ +I
Sbjct: 514 EALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVI 573

Query: 473 NCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAG 530
           + L K      A   F  MV+ GC+PN  TY ++I   A     + A +L  ++ + G
Sbjct: 574 SSLCKRWETDRAIDFFAYMVSNGCMPNESTYTMLIKGLASEGLAKEAQELLSELCSRG 631


>gi|108709396|gb|ABF97191.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
 gi|215687193|dbj|BAG91758.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|222625245|gb|EEE59377.1| hypothetical protein OsJ_11489 [Oryza sativa Japonica Group]
          Length = 644

 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 98/334 (29%), Positives = 159/334 (47%), Gaps = 2/334 (0%)

Query: 316 EALGNTNYSMDAYQANQVLKQLQDHTVALGFFNWLRRQA--GFKHDEHTYTTMVGILGRA 373
           EA+     ++D    N VL  + +          LR+ A  G + D  +Y  ++  L  A
Sbjct: 170 EAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMA 229

Query: 374 RQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTY 433
           +++G + +L+D+MVR  C PN+VT+N LI    R        +V  QM   GC PD   Y
Sbjct: 230 KRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMY 289

Query: 434 CTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVN 493
            T+ID   K G L+VA ++  +M + GL P+   Y+ ++  L  A   + A +L  EM  
Sbjct: 290 ATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQ 349

Query: 494 QGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDE 553
           + C  + VT+NI++    +       ++L   M + G  PD +TY+ V+      G +DE
Sbjct: 350 KDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDE 409

Query: 554 AEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLS 613
           A  +   M      P+   Y +++     AG    A E    M+Q G  PN  T N+L++
Sbjct: 410 AVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLIN 469

Query: 614 AFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
              + G +  A  LL+ ML  G  P L +Y+ ++
Sbjct: 470 FLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVI 503



 Score =  148 bits (373), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 82/293 (27%), Positives = 150/293 (51%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           G K +   Y T++  L  A ++    +LL +M +  C  + VT+N L+  + +   ++  
Sbjct: 316 GLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRV 375

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
           +++ +QM   GC PD +TY T+I+   K G +D A+ + K M + G  P+T +Y++++  
Sbjct: 376 IELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKG 435

Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPD 534
           L  AG    A +L  +M+ QGC PN VT+N +I    K    + A++L + M   G  PD
Sbjct: 436 LCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPD 495

Query: 535 KVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYE 594
            ++YS V++ LG  G  +EA  +   M  K   P+  +Y  +     + G V K  + ++
Sbjct: 496 LISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQMFD 555

Query: 595 AMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
            +    +R +    N+++S+  +  +   A      M++ G  P+  TYT+L+
Sbjct: 556 NIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTMLI 608



 Score =  133 bits (335), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 82/320 (25%), Positives = 147/320 (45%), Gaps = 14/320 (4%)

Query: 329 QANQVLKQLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVR 388
           + ++VL Q+ +H              G   D   Y T++  + +       N++L++M  
Sbjct: 269 RVHEVLAQMSEH--------------GCTPDIRMYATIIDGICKEGHLEVANEILNRMPS 314

Query: 389 DGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDV 448
            G +PNVV YN ++     A    EA ++  +M    C  D VT+  L+D   + G +D 
Sbjct: 315 YGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDR 374

Query: 449 AMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIA 508
            +++ ++M + G  PD  TY+ +IN   K G +  A  L   M + GC PN V+Y I++ 
Sbjct: 375 VIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLK 434

Query: 509 LQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVP 568
               A  +  A +L   M   G  P+ VT++ ++  L   G +++A  +  +M      P
Sbjct: 435 GLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSP 494

Query: 569 DEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLL 628
           D   Y  ++D  GKAG   +A E    M+  G+ PN    +S+  A  R G+++    + 
Sbjct: 495 DLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQMF 554

Query: 629 QGMLNLGLKPSLQTYTLLLS 648
             + +  ++     Y  ++S
Sbjct: 555 DNIKDTTIRSDAVLYNAVIS 574



 Score =  125 bits (313), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 73/277 (26%), Positives = 136/277 (49%)

Query: 359 DEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVF 418
           D+ T+  +V    +      + +LL+QM+  GC P+V+TY  +I+ + +   ++EA+ + 
Sbjct: 355 DDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLL 414

Query: 419 KQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKA 478
           K M   GC+P+ V+Y  ++     AG    A ++  +M   G  P+  T++ +IN L K 
Sbjct: 415 KSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKK 474

Query: 479 GHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTY 538
           G ++ A +L  +M+  GC P+L++Y+ +I    KA   + AL+L   M N G  P+ + Y
Sbjct: 475 GLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIY 534

Query: 539 SIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQ 598
           S +   L   G +++   +F  ++      D  +Y  ++    K     +A +++  M+ 
Sbjct: 535 SSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVS 594

Query: 599 AGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLG 635
            G  PN  T   L+      G   +A  LL  + + G
Sbjct: 595 NGCMPNESTYTMLIKGLASEGLAKEAQELLSELCSRG 631



 Score =  118 bits (295), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 68/267 (25%), Positives = 130/267 (48%)

Query: 382 LLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHA 441
           LL ++   GC+ ++V+YN ++     A    +  ++  +M  V C P+ VT+ TLI    
Sbjct: 203 LLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLC 262

Query: 442 KAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLV 501
           + G  +   ++  +M   G +PD   Y+ II+ + K GHL+ A+++   M + G  PN+V
Sbjct: 263 RNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVV 322

Query: 502 TYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEM 561
            YN ++     A  ++ A +L  +M       D VT++I+++     G +D    +  +M
Sbjct: 323 CYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQM 382

Query: 562 RRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQL 621
                +PD   Y  +++ + K G + +A    ++M   G +PN  +   +L      G+ 
Sbjct: 383 LSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRW 442

Query: 622 SDAYHLLQGMLNLGLKPSLQTYTLLLS 648
            DA  L+  M+  G  P+  T+  L++
Sbjct: 443 VDAEELMSQMIQQGCPPNPVTFNTLIN 469



 Score =  116 bits (290), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 96/424 (22%), Positives = 178/424 (41%), Gaps = 37/424 (8%)

Query: 359 DEHTYTTMV-GILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDV 417
           + +T+  +V G+  R R   A+ ++LD+M   GC P    Y+ ++ +  R+     ++ V
Sbjct: 110 NAYTFFPVVRGLCTRGRIADAL-EVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRV 168

Query: 418 FKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGK 477
            + M   GC  D      +++   + G +D A+ + +K+   G   D  +Y+ ++  L  
Sbjct: 169 LEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCM 228

Query: 478 AGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVT 537
           A       +L  EMV   C PN+VT+N +I    +   ++   ++   M   G  PD   
Sbjct: 229 AKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRM 288

Query: 538 YSIVMEVLGHCGYLD-----------------------------------EAEAVFAEMR 562
           Y+ +++ +   G+L+                                   EAE + +EM 
Sbjct: 289 YATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMF 348

Query: 563 RKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLS 622
           +K+   D+  + +LVD + + G V +  E  E ML  G  P+V T  ++++ F + G + 
Sbjct: 349 QKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLID 408

Query: 623 DAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGFCHELMAVSGHPAHMFLLSMPS 682
           +A  LL+ M + G KP+  +YT++L     A    D       M   G P +    +   
Sbjct: 409 EAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLI 468

Query: 683 PGPDGQNVRDHVGSFLEMMHSEDRESKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVY 742
                + + +     L+ M              V+D L K+G  EEA  +  V   K + 
Sbjct: 469 NFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGIS 528

Query: 743 PDAV 746
           P+ +
Sbjct: 529 PNTI 532



 Score =  110 bits (274), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 63/208 (30%), Positives = 112/208 (53%)

Query: 354 AGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNE 413
            G K +  +YT ++  L  A ++    +L+ QM++ GC PN VT+N LI+   +   + +
Sbjct: 420 CGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQ 479

Query: 414 ALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIIN 473
           A+++ KQM V GC PD ++Y T+ID   KAG  + A+++   M   G+SP+T  YS I  
Sbjct: 480 AIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIAC 539

Query: 474 CLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEP 533
            L + G +    Q+F  + +     + V YN +I+   K      A+  +  M + G  P
Sbjct: 540 ALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGCMP 599

Query: 534 DKVTYSIVMEVLGHCGYLDEAEAVFAEM 561
           ++ TY+++++ L   G   EA+ + +E+
Sbjct: 600 NESTYTMLIKGLASEGLAKEAQELLSEL 627



 Score = 94.7 bits (234), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 99/463 (21%), Positives = 178/463 (38%), Gaps = 76/463 (16%)

Query: 393 PNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDM 452
           PN  T+  ++        + +AL+V  +M   GC P    Y  +++   ++G    ++ +
Sbjct: 109 PNAYTFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRV 168

Query: 453 YKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAK 512
            + M A G + DT   ++++N + + G +  A  L  ++   GC  ++V+YN ++     
Sbjct: 169 LEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCM 228

Query: 513 ARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPV 572
           A+ +    +L  +M      P+ VT++ ++  L   G  +    V A+M      PD  +
Sbjct: 229 AKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRM 288

Query: 573 YGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSA------------------ 614
           Y  ++D   K G++  A E    M   GL+PNV   N++L                    
Sbjct: 289 YATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMF 348

Query: 615 -----------------FLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPY 657
                            F + G +     LL+ ML+ G  P + TYT +++         
Sbjct: 349 QKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVIN--------- 399

Query: 658 DMGFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHV--------GSFLEMMHSEDRESK 709
             GFC E +      A M L SM S G     V   +        G +++      +  +
Sbjct: 400 --GFCKEGLI---DEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQ 454

Query: 710 RGL------VDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAVKEKGMSYWLINLHVMSD 763
           +G        + +++FL K GL E+A  + +        PD          LI+   + D
Sbjct: 455 QGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPD----------LISYSTVID 504

Query: 764 GTAVIALSRTLAWFRKQMLISGVGPSRI---DIVTGWGRRSRV 803
           G      +         M+  G+ P+ I    I     R  RV
Sbjct: 505 GLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREGRV 547



 Score = 78.2 bits (191), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 45/178 (25%), Positives = 87/178 (48%)

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
           Q G   +  T+ T++  L +        +LL QM+ +GC P++++Y+ +I   G+A    
Sbjct: 454 QQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTE 513

Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
           EAL++   M   G  P+ + Y ++    ++ G ++  + M+  ++   +  D   Y+ +I
Sbjct: 514 EALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVI 573

Query: 473 NCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAG 530
           + L K      A   F  MV+ GC+PN  TY ++I   A     + A +L  ++ + G
Sbjct: 574 SSLCKRWETDRAIDFFAYMVSNGCMPNESTYTMLIKGLASEGLAKEAQELLSELCSRG 631


>gi|449438705|ref|XP_004137128.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
           mitochondrial-like [Cucumis sativus]
          Length = 628

 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 84/306 (27%), Positives = 153/306 (50%), Gaps = 4/306 (1%)

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
           Q G +     Y T++            +   D+M++ G  P + TYN LIH+       +
Sbjct: 319 QKGLRPSAVIYNTLIDGFCNKGNLDMASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTD 378

Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
           EA  + K++Q  G  PD +TY  LI+ + +      A  ++ +M A+G+ P   TY+ ++
Sbjct: 379 EAECMIKEIQEKGISPDAITYNILINGYCRCANAKKAFLLHDEMLASGIKPTKKTYTSLL 438

Query: 473 NCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFE 532
           + L K   ++ A  LF ++ ++G +P+++ +N +I       N + A +L +DM      
Sbjct: 439 HVLSKKNRMKEADDLFKKITSEGVLPDVIMFNALIDGHCSNSNVKGAFELLKDMDRMKVP 498

Query: 533 PDKVTYSIVMEVLGHC--GYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAW 590
           PD+VT++ +M+  GHC  G ++EA  +F EM+R+   PD   +  L+  + + G+++ A+
Sbjct: 499 PDEVTFNTIMQ--GHCREGKVEEARELFDEMKRRGIKPDHISFNTLISGYSRRGDIKDAF 556

Query: 591 EWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCC 650
                ML  G  P V T N+L+    +  +   A  LL+ M++ G+ P   TY  L+   
Sbjct: 557 RVRNEMLDTGFNPTVLTYNALVQGLCKNQEGDLAEELLKEMVSKGMTPDDTTYFTLIEGI 616

Query: 651 TEARSP 656
            +   P
Sbjct: 617 AKVNIP 622



 Score =  134 bits (338), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 85/295 (28%), Positives = 145/295 (49%)

Query: 354 AGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNE 413
           +G K +  TY T+V     + +  A + +L  M R   +P+  TY  LI    +   L E
Sbjct: 250 SGVKPNIVTYNTIVHGYCSSGRVEAADAILTTMKRQKIEPDSFTYGSLISGMCKQGRLEE 309

Query: 414 ALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIIN 473
           A  +F++M   G  P  V Y TLID     G LD+A     +M   G+SP   TY+ +I+
Sbjct: 310 ASKIFEEMVQKGLRPSAVIYNTLIDGFCNKGNLDMASAYKDEMLKKGISPTMSTYNSLIH 369

Query: 474 CLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEP 533
            L        A  +  E+  +G  P+ +TYNI+I    +  N + A  L+ +M  +G +P
Sbjct: 370 ALFMEQRTDEAECMIKEIQEKGISPDAITYNILINGYCRCANAKKAFLLHDEMLASGIKP 429

Query: 534 DKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWY 593
            K TY+ ++ VL     + EA+ +F ++  +  +PD  ++  L+D      NV+ A+E  
Sbjct: 430 TKKTYTSLLHVLSKKNRMKEADDLFKKITSEGVLPDVIMFNALIDGHCSNSNVKGAFELL 489

Query: 594 EAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
           + M +  + P+  T N+++    R G++ +A  L   M   G+KP   ++  L+S
Sbjct: 490 KDMDRMKVPPDEVTFNTIMQGHCREGKVEEARELFDEMKRRGIKPDHISFNTLIS 544



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 74/266 (27%), Positives = 134/266 (50%)

Query: 382 LLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHA 441
           L  +M R   + +V T+N +I+   +   L +A D    M+  G +P+ VTY T++  + 
Sbjct: 208 LYAEMFRLRIKSSVYTFNIMINVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHGYC 267

Query: 442 KAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLV 501
            +G ++ A  +   M+   + PD+FTY  +I+ + K G L+ A ++F EMV +G  P+ V
Sbjct: 268 SSGRVEAADAILTTMKRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAV 327

Query: 502 TYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEM 561
            YN +I       N   A     +M   G  P   TY+ ++  L      DEAE +  E+
Sbjct: 328 IYNTLIDGFCNKGNLDMASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEI 387

Query: 562 RRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQL 621
           + K   PD   Y +L++ + +  N +KA+  ++ ML +G++P   T  SLL    +  ++
Sbjct: 388 QEKGISPDAITYNILINGYCRCANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRM 447

Query: 622 SDAYHLLQGMLNLGLKPSLQTYTLLL 647
            +A  L + + + G+ P +  +  L+
Sbjct: 448 KEADDLFKKITSEGVLPDVIMFNALI 473



 Score =  120 bits (301), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 76/278 (27%), Positives = 132/278 (47%), Gaps = 6/278 (2%)

Query: 396 VTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKK 455
           + ++ LI S    N  +EA + F  M+  G  P   T  +L+ +  K    + A  +Y +
Sbjct: 152 IVFDYLIKSCCDMNRADEAFECFYTMKEKGVLPTIETCNSLLSLFLKLNRTEAAWVLYAE 211

Query: 456 MQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARN 515
           M    +    +T++++IN L K G L+ A      M   G  PN+VTYN ++     +  
Sbjct: 212 MFRLRIKSSVYTFNIMINVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHGYCSSGR 271

Query: 516 YQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGL 575
            ++A  +   M+    EPD  TY  ++  +   G L+EA  +F EM +K   P   +Y  
Sbjct: 272 VEAADAILTTMKRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNT 331

Query: 576 LVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLG 635
           L+D +   GN+  A  + + ML+ G+ P + T NSL+ A     +  +A  +++ +   G
Sbjct: 332 LIDGFCNKGNLDMASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKG 391

Query: 636 LKPSLQTYTLLLS--C-CTEARSPYDMGFCHELMAVSG 670
           + P   TY +L++  C C  A+  +     H+ M  SG
Sbjct: 392 ISPDAITYNILINGYCRCANAKKAF---LLHDEMLASG 426



 Score =  111 bits (277), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 63/232 (27%), Positives = 113/232 (48%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           ++ G   D  TY  ++    R         L D+M+  G +P   TY  L+H   + N +
Sbjct: 388 QEKGISPDAITYNILINGYCRCANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRM 447

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
            EA D+FK++   G  PD + +  LID H     +  A ++ K M    + PD  T++ I
Sbjct: 448 KEADDLFKKITSEGVLPDVIMFNALIDGHCSNSNVKGAFELLKDMDRMKVPPDEVTFNTI 507

Query: 472 INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF 531
           +    + G ++ A +LF EM  +G  P+ +++N +I+  ++  + + A ++  +M + GF
Sbjct: 508 MQGHCREGKVEEARELFDEMKRRGIKPDHISFNTLISGYSRRGDIKDAFRVRNEMLDTGF 567

Query: 532 EPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKA 583
            P  +TY+ +++ L      D AE +  EM  K   PD+  Y  L++   K 
Sbjct: 568 NPTVLTYNALVQGLCKNQEGDLAEELLKEMVSKGMTPDDTTYFTLIEGIAKV 619



 Score =  106 bits (265), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 69/262 (26%), Positives = 120/262 (45%)

Query: 386 MVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGF 445
           M   G  P + T N L+  + + N    A  ++ +M  +  +    T+  +I++  K G 
Sbjct: 177 MKEKGVLPTIETCNSLLSLFLKLNRTEAAWVLYAEMFRLRIKSSVYTFNIMINVLCKEGK 236

Query: 446 LDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNI 505
           L  A D    M+ +G+ P+  TY+ I++    +G ++AA  +   M  Q   P+  TY  
Sbjct: 237 LKKAKDFVGHMETSGVKPNIVTYNTIVHGYCSSGRVEAADAILTTMKRQKIEPDSFTYGS 296

Query: 506 MIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKN 565
           +I+   K    + A K++ +M   G  P  V Y+ +++   + G LD A A   EM +K 
Sbjct: 297 LISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNTLIDGFCNKGNLDMASAYKDEMLKKG 356

Query: 566 WVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAY 625
             P    Y  L+          +A    + + + G+ P+  T N L++ + R      A+
Sbjct: 357 ISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKGISPDAITYNILINGYCRCANAKKAF 416

Query: 626 HLLQGMLNLGLKPSLQTYTLLL 647
            L   ML  G+KP+ +TYT LL
Sbjct: 417 LLHDEMLASGIKPTKKTYTSLL 438



 Score =  101 bits (252), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 50/200 (25%), Positives = 107/200 (53%)

Query: 354 AGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNE 413
           +G K  + TYT+++ +L +  +    + L  ++  +G  P+V+ +N LI  +   + +  
Sbjct: 425 SGIKPTKKTYTSLLHVLSKKNRMKEADDLFKKITSEGVLPDVIMFNALIDGHCSNSNVKG 484

Query: 414 ALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIIN 473
           A ++ K M  +   PD VT+ T++  H + G ++ A +++ +M+  G+ PD  +++ +I+
Sbjct: 485 AFELLKDMDRMKVPPDEVTFNTIMQGHCREGKVEEARELFDEMKRRGIKPDHISFNTLIS 544

Query: 474 CLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEP 533
              + G ++ A ++  EM++ G  P ++TYN ++    K +    A +L ++M + G  P
Sbjct: 545 GYSRRGDIKDAFRVRNEMLDTGFNPTVLTYNALVQGLCKNQEGDLAEELLKEMVSKGMTP 604

Query: 534 DKVTYSIVMEVLGHCGYLDE 553
           D  TY  ++E +      DE
Sbjct: 605 DDTTYFTLIEGIAKVNIPDE 624



 Score = 69.7 bits (169), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 69/331 (20%), Positives = 133/331 (40%), Gaps = 53/331 (16%)

Query: 466 FTYSVIINCLGKA----GHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALK 521
           F  S++ + L K+         A + F  M  +G +P + T N +++L  K    ++A  
Sbjct: 148 FKSSIVFDYLIKSCCDMNRADEAFECFYTMKEKGVLPTIETCNSLLSLFLKLNRTEAAWV 207

Query: 522 LYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWG 581
           LY +M     +    T++I++ VL   G L +A+     M      P+   Y  +V  + 
Sbjct: 208 LYAEMFRLRIKSSVYTFNIMINVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHGYC 267

Query: 582 KAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQ 641
            +G V  A      M +  + P+  T  SL+S   + G+L +A  + + M+  GL+PS  
Sbjct: 268 SSGRVEAADAILTTMKRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAV 327

Query: 642 TYTLLLSCCTEARSPYDMGFCHE--LMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLE 699
            Y  L+            GFC++  L   S +   M            + +   + ++  
Sbjct: 328 IYNTLID-----------GFCNKGNLDMASAYKDEML----------KKGISPTMSTYNS 366

Query: 700 MMHSEDRESKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAVKEKGMSYWLINLH 759
           ++H+   E +                 +EA  + +   +K + PDA          I  +
Sbjct: 367 LIHALFMEQR----------------TDEAECMIKEIQEKGISPDA----------ITYN 400

Query: 760 VMSDGTAVIALSRTLAWFRKQMLISGVGPSR 790
           ++ +G    A ++       +ML SG+ P++
Sbjct: 401 ILINGYCRCANAKKAFLLHDEMLASGIKPTK 431



 Score = 48.5 bits (114), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 29/102 (28%), Positives = 50/102 (49%), Gaps = 1/102 (0%)

Query: 346 FFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSY 405
            F+ ++R+ G K D  ++ T++    R        ++ ++M+  G  P V+TYN L+   
Sbjct: 523 LFDEMKRR-GIKPDHISFNTLISGYSRRGDIKDAFRVRNEMLDTGFNPTVLTYNALVQGL 581

Query: 406 GRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLD 447
            +    + A ++ K+M   G  PD  TY TLI+  AK    D
Sbjct: 582 CKNQEGDLAEELLKEMVSKGMTPDDTTYFTLIEGIAKVNIPD 623


>gi|413915966|gb|AFW55898.1| hypothetical protein ZEAMMB73_909442, partial [Zea mays]
          Length = 694

 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 96/335 (28%), Positives = 165/335 (49%), Gaps = 36/335 (10%)

Query: 349 WLRRQA-GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGR 407
           ++R +A G   D  TY +++   G+  +   +  L+ +M + GC  +VVTYN LI+ + +
Sbjct: 222 FVRMKAMGCSPDVVTYNSLIDGYGKCGELEEVELLVSEMRKSGCAADVVTYNALINCFSK 281

Query: 408 ANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFT 467
             ++ +A   F +M+ +G   + VT  T +D   K G +  AM ++ +M+  G+ P+ FT
Sbjct: 282 FGWIEKAYSYFGEMKRLGVMANVVTLSTFVDAFCKEGLVREAMKLFAQMRVRGMMPNEFT 341

Query: 468 YSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMI----------------ALQA 511
           Y+ +++   KAG L  A  L  EMV+QG +PN+VTY +M+                +L  
Sbjct: 342 YTSLVDGTCKAGRLDDAIVLLDEMVHQGLVPNVVTYTVMVDGLCKEGKVAVADDVLSLME 401

Query: 512 KA-------------------RNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLD 552
           +A                   +N + AL L  +M+N G E D   Y  ++  L     LD
Sbjct: 402 RAGVKANELLYTTLIHGHFMNKNSERALDLLNEMKNKGMELDVSLYGTLIWGLCKVQKLD 461

Query: 553 EAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLL 612
           EA+++  +M      P+  +Y  ++D + KAG   +A      +  +GL+PNV T  +L+
Sbjct: 462 EAKSLLHKMDDCGLRPNTVIYTTIMDAFFKAGKESEAVALLHKIPDSGLQPNVVTYCALI 521

Query: 613 SAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
               + G + +A      M  LGL P++Q YT L+
Sbjct: 522 DGLCKAGSIYEAISHFDKMRELGLDPNVQVYTTLI 556



 Score =  137 bits (344), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 93/334 (27%), Positives = 151/334 (45%), Gaps = 41/334 (12%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINK---LLDQMVRDGCQPNVVTYNRLIHSYGRA 408
           R++G   D  TY  ++    +   FG I K      +M R G   NVVT +  + ++ + 
Sbjct: 261 RKSGCAADVVTYNALINCFSK---FGWIEKAYSYFGEMKRLGVMANVVTLSTFVDAFCKE 317

Query: 409 NYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTY 468
             + EA+ +F QM+V G  P+  TY +L+D   KAG LD A+ +  +M   GL P+  TY
Sbjct: 318 GLVREAMKLFAQMRVRGMMPNEFTYTSLVDGTCKAGRLDDAIVLLDEMVHQGLVPNVVTY 377

Query: 469 SVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQN 528
           +V+++ L K G +  A  +   M   G   N + Y  +I      +N + AL L  +M+N
Sbjct: 378 TVMVDGLCKEGKVAVADDVLSLMERAGVKANELLYTTLIHGHFMNKNSERALDLLNEMKN 437

Query: 529 AGFE-----------------------------------PDKVTYSIVMEVLGHCGYLDE 553
            G E                                   P+ V Y+ +M+     G   E
Sbjct: 438 KGMELDVSLYGTLIWGLCKVQKLDEAKSLLHKMDDCGLRPNTVIYTTIMDAFFKAGKESE 497

Query: 554 AEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLS 613
           A A+  ++      P+   Y  L+D   KAG++ +A   ++ M + GL PNV    +L+ 
Sbjct: 498 AVALLHKIPDSGLQPNVVTYCALIDGLCKAGSIYEAISHFDKMRELGLDPNVQVYTTLID 557

Query: 614 AFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
            F ++G LS A HL+  M++ G+      YT L+
Sbjct: 558 GFCKIGSLSKAVHLMNEMVDKGMSLDKVVYTSLI 591



 Score =  133 bits (335), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 87/282 (30%), Positives = 141/282 (50%), Gaps = 5/282 (1%)

Query: 370 LGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPD 429
           L R RQ G + +L + +      PNV T+N +I    +   L EA  +F +M+ +GC PD
Sbjct: 178 LARNRQGGLVRRLFEHLP----APNVFTFNIVIDFLCKQGELVEARALFVRMKAMGCSPD 233

Query: 430 RVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFC 489
            VTY +LID + K G L+    +  +M+ +G + D  TY+ +INC  K G ++ A+  F 
Sbjct: 234 VVTYNSLIDGYGKCGELEEVELLVSEMRKSGCAADVVTYNALINCFSKFGWIEKAYSYFG 293

Query: 490 EMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCG 549
           EM   G + N+VT +  +    K    + A+KL+  M+  G  P++ TY+ +++     G
Sbjct: 294 EMKRLGVMANVVTLSTFVDAFCKEGLVREAMKLFAQMRVRGMMPNEFTYTSLVDGTCKAG 353

Query: 550 YLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCN 609
            LD+A  +  EM  +  VP+   Y ++VD   K G V  A +    M +AG++ N     
Sbjct: 354 RLDDAIVLLDEMVHQGLVPNVVTYTVMVDGLCKEGKVAVADDVLSLMERAGVKANELLYT 413

Query: 610 SLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTY-TLLLSCC 650
           +L+           A  LL  M N G++  +  Y TL+   C
Sbjct: 414 TLIHGHFMNKNSERALDLLNEMKNKGMELDVSLYGTLIWGLC 455



 Score =  129 bits (323), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 93/321 (28%), Positives = 149/321 (46%), Gaps = 12/321 (3%)

Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLI 402
           A+  F  +R + G   +E TYT++V    +A +      LLD+MV  G  PNVVTY  ++
Sbjct: 323 AMKLFAQMRVR-GMMPNEFTYTSLVDGTCKAGRLDDAIVLLDEMVHQGLVPNVVTYTVMV 381

Query: 403 HSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLS 462
               +   +  A DV   M+  G + + + Y TLI  H      + A+D+  +M+  G+ 
Sbjct: 382 DGLCKEGKVAVADDVLSLMERAGVKANELLYTTLIHGHFMNKNSERALDLLNEMKNKGME 441

Query: 463 PDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKL 522
            D   Y  +I  L K   L  A  L  +M + G  PN V Y  ++    KA     A+ L
Sbjct: 442 LDVSLYGTLIWGLCKVQKLDEAKSLLHKMDDCGLRPNTVIYTTIMDAFFKAGKESEAVAL 501

Query: 523 YRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGK 582
              + ++G +P+ VTY  +++ L   G + EA + F +MR     P+  VY  L+D + K
Sbjct: 502 LHKIPDSGLQPNVVTYCALIDGLCKAGSIYEAISHFDKMRELGLDPNVQVYTTLIDGFCK 561

Query: 583 AGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQT 642
            G++ KA      M+  G+  +     SL+   ++ G L  A+ L   M+  GL+  L  
Sbjct: 562 IGSLSKAVHLMNEMVDKGMSLDKVVYTSLIDGHMKQGDLQGAFALKAKMIETGLQLDLYC 621

Query: 643 YTLLLSCCTEARSPYDMGFCH 663
           YT  +S           GFC+
Sbjct: 622 YTCFIS-----------GFCN 631



 Score =  122 bits (305), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 83/286 (29%), Positives = 134/286 (46%)

Query: 362 TYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQM 421
           TYT MV  L +  +    + +L  M R G + N + Y  LIH +        ALD+  +M
Sbjct: 376 TYTVMVDGLCKEGKVAVADDVLSLMERAGVKANELLYTTLIHGHFMNKNSERALDLLNEM 435

Query: 422 QVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHL 481
           +  G E D   Y TLI    K   LD A  +  KM   GL P+T  Y+ I++   KAG  
Sbjct: 436 KNKGMELDVSLYGTLIWGLCKVQKLDEAKSLLHKMDDCGLRPNTVIYTTIMDAFFKAGKE 495

Query: 482 QAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIV 541
             A  L  ++ + G  PN+VTY  +I    KA +   A+  +  M+  G +P+   Y+ +
Sbjct: 496 SEAVALLHKIPDSGLQPNVVTYCALIDGLCKAGSIYEAISHFDKMRELGLDPNVQVYTTL 555

Query: 542 MEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGL 601
           ++     G L +A  +  EM  K    D+ VY  L+D   K G+++ A+     M++ GL
Sbjct: 556 IDGFCKIGSLSKAVHLMNEMVDKGMSLDKVVYTSLIDGHMKQGDLQGAFALKAKMIETGL 615

Query: 602 RPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
           + ++      +S F  +  + +A  +L  M+  G+ P    Y  L+
Sbjct: 616 QLDLYCYTCFISGFCNMNMMQEARGVLSEMIGTGITPDKTAYNCLI 661



 Score =  115 bits (287), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 73/254 (28%), Positives = 120/254 (47%), Gaps = 1/254 (0%)

Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLI 402
           AL   N ++ + G + D   Y T++  L + ++      LL +M   G +PN V Y  ++
Sbjct: 428 ALDLLNEMKNK-GMELDVSLYGTLIWGLCKVQKLDEAKSLLHKMDDCGLRPNTVIYTTIM 486

Query: 403 HSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLS 462
            ++ +A   +EA+ +  ++   G +P+ VTYC LID   KAG +  A+  + KM+  GL 
Sbjct: 487 DAFFKAGKESEAVALLHKIPDSGLQPNVVTYCALIDGLCKAGSIYEAISHFDKMRELGLD 546

Query: 463 PDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKL 522
           P+   Y+ +I+   K G L  A  L  EMV++G   + V Y  +I    K  + Q A  L
Sbjct: 547 PNVQVYTTLIDGFCKIGSLSKAVHLMNEMVDKGMSLDKVVYTSLIDGHMKQGDLQGAFAL 606

Query: 523 YRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGK 582
              M   G + D   Y+  +    +   + EA  V +EM      PD+  Y  L+  + K
Sbjct: 607 KAKMIETGLQLDLYCYTCFISGFCNMNMMQEARGVLSEMIGTGITPDKTAYNCLIRKYQK 666

Query: 583 AGNVRKAWEWYEAM 596
            GN+ +A      M
Sbjct: 667 LGNMEEASSLQNEM 680



 Score =  105 bits (263), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 72/252 (28%), Positives = 119/252 (47%), Gaps = 32/252 (12%)

Query: 435 TLIDIHAKAGFLDVAMDMYKKM----------------------QAAGL---------SP 463
           TL+ + A  G LD A+    ++                      +  GL         +P
Sbjct: 138 TLLSLLADHGLLDDAVRALARVRQLRVPPNTRTCNHILLRLARNRQGGLVRRLFEHLPAP 197

Query: 464 DTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLY 523
           + FT++++I+ L K G L  A  LF  M   GC P++VTYN +I    K    +    L 
Sbjct: 198 NVFTFNIVIDFLCKQGELVEARALFVRMKAMGCSPDVVTYNSLIDGYGKCGELEEVELLV 257

Query: 524 RDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKA 583
            +M+ +G   D VTY+ ++      G++++A + F EM+R   + +       VD + K 
Sbjct: 258 SEMRKSGCAADVVTYNALINCFSKFGWIEKAYSYFGEMKRLGVMANVVTLSTFVDAFCKE 317

Query: 584 GNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTY 643
           G VR+A + +  M   G+ PN  T  SL+    + G+L DA  LL  M++ GL P++ TY
Sbjct: 318 GLVREAMKLFAQMRVRGMMPNEFTYTSLVDGTCKAGRLDDAIVLLDEMVHQGLVPNVVTY 377

Query: 644 TLLLS-CCTEAR 654
           T+++   C E +
Sbjct: 378 TVMVDGLCKEGK 389



 Score = 78.6 bits (192), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 50/176 (28%), Positives = 79/176 (44%)

Query: 354 AGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNE 413
           +G + +  TY  ++  L +A          D+M   G  PNV  Y  LI  + +   L++
Sbjct: 508 SGLQPNVVTYCALIDGLCKAGSIYEAISHFDKMRELGLDPNVQVYTTLIDGFCKIGSLSK 567

Query: 414 ALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIIN 473
           A+ +  +M   G   D+V Y +LID H K G L  A  +  KM   GL  D + Y+  I+
Sbjct: 568 AVHLMNEMVDKGMSLDKVVYTSLIDGHMKQGDLQGAFALKAKMIETGLQLDLYCYTCFIS 627

Query: 474 CLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNA 529
                  +Q A  +  EM+  G  P+   YN +I    K  N + A  L  +M++ 
Sbjct: 628 GFCNMNMMQEARGVLSEMIGTGITPDKTAYNCLIRKYQKLGNMEEASSLQNEMESV 683


>gi|449507709|ref|XP_004163108.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
           mitochondrial-like [Cucumis sativus]
          Length = 999

 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 102/394 (25%), Positives = 189/394 (47%), Gaps = 2/394 (0%)

Query: 354 AGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNE 413
           +G   +  TYT ++    +        ++ D+M+  G + NVVTYN +I    +A  + +
Sbjct: 340 SGLNPNRFTYTALIDGFIKEGNIEEALRIKDEMITRGLKLNVVTYNAMIGGIAKAGEMAK 399

Query: 414 ALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIIN 473
           A+ +F +M + G EPD  TY  LID + K+  +  A ++  +M+A  L+P  FTYSV+I+
Sbjct: 400 AMSLFNEMLMAGIEPDTWTYNLLIDGYLKSHDMAKACELLAEMKARKLTPSPFTYSVLIS 459

Query: 474 CLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEP 533
            L  +  LQ A+++  +M+  G  PN+  Y  +I    +   Y+ A++L + M   G  P
Sbjct: 460 GLCHSSDLQKANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIELLKIMIANGVLP 519

Query: 534 DKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWY 593
           D   Y+ ++  L     ++EA+ +  +M  K   P+   YG  ++L+ K+G ++ A  ++
Sbjct: 520 DLFCYNCLIIGLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSKSGEIQVAERYF 579

Query: 594 EAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL-SCCTE 652
           + ML +G+ PN      L+     VG   +A    + ML  GL P ++ Y+ ++ S    
Sbjct: 580 KDMLSSGIVPNNVIYTILIKGHCDVGNTVEALSTFKCMLEKGLIPDIRAYSAIIHSLSKN 639

Query: 653 ARSPYDMGFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRESKRGL 712
            ++   MG   + +     P      S+ S      ++      + EM+H+    +    
Sbjct: 640 GKTKEAMGVFLKFLKTGVVPDVFLYNSLISGFCKEGDIEKASQLYDEMLHNGINPNIVVY 699

Query: 713 VDAVVDFLH-KSGLKEEAGSVWEVAAQKNVYPDA 745
              + D+ + KSG   EA  +++    K + PD 
Sbjct: 700 NTLINDYGYCKSGNLTEAFKLFDEMISKGISPDG 733



 Score =  144 bits (362), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 102/337 (30%), Positives = 171/337 (50%), Gaps = 25/337 (7%)

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
           +A    D +TYT ++    +         +L +M ++ C+PN+ TYN  I    +   ++
Sbjct: 235 EAKIVPDVYTYTNVIKAHCKVGDVIKGKMVLSEMEKE-CKPNLFTYNAFIGGLCQTGAVD 293

Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
           EAL+V K M   G  PD  TY  L+D   K      A  +++ M ++GL+P+ FTY+ +I
Sbjct: 294 EALEVKKLMMEKGLGPDGHTYTLLVDGFCKQKRSKEAKLIFESMPSSGLNPNRFTYTALI 353

Query: 473 NCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFE 532
           +   K G+++ A ++  EM+ +G   N+VTYN MI   AKA     A+ L+ +M  AG E
Sbjct: 354 DGFIKEGNIEEALRIKDEMITRGLKLNVVTYNAMIGGIAKAGEMAKAMSLFNEMLMAGIE 413

Query: 533 PDKVTYSIVMEVLGHCGYL---DEAEA--VFAEMRRKNWVPDEPVYGLLVDLWGKAGNVR 587
           PD  TY+++++     GYL   D A+A  + AEM+ +   P    Y +L+     + +++
Sbjct: 414 PDTWTYNLLID-----GYLKSHDMAKACELLAEMKARKLTPSPFTYSVLISGLCHSSDLQ 468

Query: 588 KAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
           KA E  + M++ G++PNV    +L+ A+++  +   A  LL+ M+  G+ P L  Y  L+
Sbjct: 469 KANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIELLKIMIANGVLPDLFCYNCLI 528

Query: 648 SCCTEARSPYDMGFCHELMAVSGHPAHMFLLSMPSPG 684
                      +G C    A     A M L+ M   G
Sbjct: 529 -----------IGLCR---AKKVEEAKMLLVDMGEKG 551



 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 91/297 (30%), Positives = 145/297 (48%), Gaps = 3/297 (1%)

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
           + G K + HTY   + +  ++ +     +    M+  G  PN V Y  LI  +       
Sbjct: 549 EKGIKPNAHTYGAFINLYSKSGEIQVAERYFKDMLSSGIVPNNVIYTILIKGHCDVGNTV 608

Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
           EAL  FK M   G  PD   Y  +I   +K G    AM ++ K    G+ PD F Y+ +I
Sbjct: 609 EALSTFKCMLEKGLIPDIRAYSAIIHSLSKNGKTKEAMGVFLKFLKTGVVPDVFLYNSLI 668

Query: 473 NCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQA--KARNYQSALKLYRDMQNAG 530
           +   K G ++ A QL+ EM++ G  PN+V YN +I      K+ N   A KL+ +M + G
Sbjct: 669 SGFCKEGDIEKASQLYDEMLHNGINPNIVVYNTLINDYGYCKSGNLTEAFKLFDEMISKG 728

Query: 531 FEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAW 590
             PD   Y I+++  G  G L++A ++F E ++K+ V     +  L+D + K G V +A 
Sbjct: 729 ISPDGYIYCILIDGCGKEGNLEKALSLFHEAQQKS-VGSLSAFNSLIDSFCKHGKVIEAR 787

Query: 591 EWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
           E ++ M+   L PN+ T   L+ A+ +   + +A  L   M    + P+  TYT LL
Sbjct: 788 ELFDDMVDKKLTPNIVTYTILIDAYGKAEMMEEAEQLFLDMETRNIIPNTLTYTSLL 844



 Score =  130 bits (327), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 111/408 (27%), Positives = 183/408 (44%), Gaps = 38/408 (9%)

Query: 357 KHDEHTYTTMVGILGRARQFGAINKLLD---QMVRDGCQPNVVTYNRLIHSYGRANYLNE 413
           K +  TY   +G L    Q GA+++ L+    M+  G  P+  TY  L+  + +     E
Sbjct: 273 KPNLFTYNAFIGGLC---QTGAVDEALEVKKLMMEKGLGPDGHTYTLLVDGFCKQKRSKE 329

Query: 414 ALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIIN 473
           A  +F+ M   G  P+R TY  LID   K G ++ A+ +  +M   GL  +  TY+ +I 
Sbjct: 330 AKLIFESMPSSGLNPNRFTYTALIDGFIKEGNIEEALRIKDEMITRGLKLNVVTYNAMIG 389

Query: 474 CLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEP 533
            + KAG +  A  LF EM+  G  P+  TYN++I    K+ +   A +L  +M+     P
Sbjct: 390 GIAKAGEMAKAMSLFNEMLMAGIEPDTWTYNLLIDGYLKSHDMAKACELLAEMKARKLTP 449

Query: 534 DKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWY 593
              TYS+++  L H   L +A  V  +M R    P+  +YG L+  + +      A E  
Sbjct: 450 SPFTYSVLISGLCHSSDLQKANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIELL 509

Query: 594 EAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEA 653
           + M+  G+ P++   N L+    R  ++ +A  LL  M   G+KP+  TY   ++     
Sbjct: 510 KIMIANGVLPDLFCYNCLIIGLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFIN----- 564

Query: 654 RSPYDMGFCHELMAVSG--HPAHMFLLSMPSPGPDGQNV------RDH--VGSFLEMMHS 703
                      L + SG    A  +   M S G    NV      + H  VG+ +E + +
Sbjct: 565 -----------LYSKSGEIQVAERYFKDMLSSGIVPNNVIYTILIKGHCDVGNTVEALST 613

Query: 704 EDRESKRGLV------DAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDA 745
                ++GL+       A++  L K+G  +EA  V+    +  V PD 
Sbjct: 614 FKCMLEKGLIPDIRAYSAIIHSLSKNGKTKEAMGVFLKFLKTGVVPDV 661



 Score =  124 bits (310), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 84/308 (27%), Positives = 147/308 (47%), Gaps = 6/308 (1%)

Query: 343 ALG-FFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRL 401
           A+G F  +L+   G   D   Y +++    +       ++L D+M+ +G  PN+V YN L
Sbjct: 645 AMGVFLKFLK--TGVVPDVFLYNSLISGFCKEGDIEKASQLYDEMLHNGINPNIVVYNTL 702

Query: 402 IHSYG--RANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAA 459
           I+ YG  ++  L EA  +F +M   G  PD   YC LID   K G L+ A+ ++ + Q  
Sbjct: 703 INDYGYCKSGNLTEAFKLFDEMISKGISPDGYIYCILIDGCGKEGNLEKALSLFHEAQQK 762

Query: 460 GLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSA 519
            +   +  ++ +I+   K G +  A +LF +MV++   PN+VTY I+I    KA   + A
Sbjct: 763 SVGSLS-AFNSLIDSFCKHGKVIEARELFDDMVDKKLTPNIVTYTILIDAYGKAEMMEEA 821

Query: 520 LKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDL 579
            +L+ DM+     P+ +TY+ ++      G   +  ++F +M  +    D   YG++   
Sbjct: 822 EQLFLDMETRNIIPNTLTYTSLLLSYNQIGNRFKMISLFKDMEARGIACDAIAYGVMASA 881

Query: 580 WGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPS 639
           + K G   +A +     L  G++      ++L+    +  Q+S    LL  M    L  S
Sbjct: 882 YCKEGKSLEALKLLNKSLVEGIKLEDDVFDALIFHLCKEKQISTVLELLSEMGKEELSLS 941

Query: 640 LQTYTLLL 647
            +T   LL
Sbjct: 942 SKTCNTLL 949



 Score =  114 bits (284), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 106/406 (26%), Positives = 174/406 (42%), Gaps = 39/406 (9%)

Query: 286 PFSRHFASTGNVVESVSRILRQWKWGPLAEEALGNTNYSMDAYQANQVLKQLQ----DHT 341
           PF  H+  T   V   S IL++  W     + L N   ++       V   LQ    D +
Sbjct: 50  PFD-HYDDT---VREFSMILKRKDW-----QILLNNEDNVRKLNPEIVCSVLQKSEIDDS 100

Query: 342 VAL-GFFNWLRRQAGFKHDEHTYTTMV------GILGRARQFGAINKLL----------D 384
           V L  FF+W   +       H+Y+ +       G++ +A     + KLL          D
Sbjct: 101 VRLQNFFHWSSSKMSTPQYLHSYSILAIRLCNSGLIHQADNM--LEKLLQTRKPPLEILD 158

Query: 385 QMVR---DGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHA 441
            +VR   +    N+  ++  I  +    +LNEA  VF      G  P  +    L+    
Sbjct: 159 SLVRCYREFGGSNLTVFDIFIDKFRVLGFLNEASSVFIASISEGFFPTLICCNNLMRDLL 218

Query: 442 KAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLV 501
           KA  + +   +Y  M  A + PD +TY+ +I    K G +     +  EM  + C PNL 
Sbjct: 219 KANMMGLFWKVYGSMVEAKIVPDVYTYTNVIKAHCKVGDVIKGKMVLSEM-EKECKPNLF 277

Query: 502 TYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEM 561
           TYN  I    +      AL++ + M   G  PD  TY+++++         EA+ +F  M
Sbjct: 278 TYNAFIGGLCQTGAVDEALEVKKLMMEKGLGPDGHTYTLLVDGFCKQKRSKEAKLIFESM 337

Query: 562 RRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQL 621
                 P+   Y  L+D + K GN+ +A    + M+  GL+ NV T N+++    + G++
Sbjct: 338 PSSGLNPNRFTYTALIDGFIKEGNIEEALRIKDEMITRGLKLNVVTYNAMIGGIAKAGEM 397

Query: 622 SDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGFCHELMA 667
           + A  L   ML  G++P   TY LL+    ++   +DM    EL+A
Sbjct: 398 AKAMSLFNEMLMAGIEPDTWTYNLLIDGYLKS---HDMAKACELLA 440



 Score = 99.4 bits (246), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 71/277 (25%), Positives = 127/277 (45%), Gaps = 12/277 (4%)

Query: 387 VRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFL 446
           + +G  P ++  N L+    +AN +     V+  M      PD  TY  +I  H K G +
Sbjct: 199 ISEGFFPTLICCNNLMRDLLKANMMGLFWKVYGSMVEAKIVPDVYTYTNVIKAHCKVGDV 258

Query: 447 DVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIM 506
                +  +M+     P+ FTY+  I  L + G +  A ++   M+ +G  P+  TY ++
Sbjct: 259 IKGKMVLSEMEKE-CKPNLFTYNAFIGGLCQTGAVDEALEVKKLMMEKGLGPDGHTYTLL 317

Query: 507 IALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNW 566
           +    K +  + A  ++  M ++G  P++ TY+ +++     G ++EA  +  EM  +  
Sbjct: 318 VDGFCKQKRSKEAKLIFESMPSSGLNPNRFTYTALIDGFIKEGNIEEALRIKDEMITRGL 377

Query: 567 VPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYH 626
             +   Y  ++    KAG + KA   +  ML AG+ P+  T N L+  +L+   ++ A  
Sbjct: 378 KLNVVTYNAMIGGIAKAGEMAKAMSLFNEMLMAGIEPDTWTYNLLIDGYLKSHDMAKACE 437

Query: 627 LLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGFCH 663
           LL  M    L PS  TY++L+S           G CH
Sbjct: 438 LLAEMKARKLTPSPFTYSVLIS-----------GLCH 463



 Score = 79.3 bits (194), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 51/188 (27%), Positives = 87/188 (46%)

Query: 381 KLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIH 440
           +L D MV     PN+VTY  LI +YG+A  + EA  +F  M+     P+ +TY +L+  +
Sbjct: 788 ELFDDMVDKKLTPNIVTYTILIDAYGKAEMMEEAEQLFLDMETRNIIPNTLTYTSLLLSY 847

Query: 441 AKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNL 500
            + G     + ++K M+A G++ D   Y V+ +   K G    A +L  + + +G     
Sbjct: 848 NQIGNRFKMISLFKDMEARGIACDAIAYGVMASAYCKEGKSLEALKLLNKSLVEGIKLED 907

Query: 501 VTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAE 560
             ++ +I    K +   + L+L  +M          T + ++      G  DEA  V   
Sbjct: 908 DVFDALIFHLCKEKQISTVLELLSEMGKEELSLSSKTCNTLLLGFYKSGNEDEASKVLGV 967

Query: 561 MRRKNWVP 568
           M+R  WVP
Sbjct: 968 MQRLGWVP 975



 Score = 56.6 bits (135), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 75/360 (20%), Positives = 136/360 (37%), Gaps = 72/360 (20%)

Query: 445 FLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYN 504
            LD  +  Y++   + L+     + + I+     G L  A  +F   +++G  P L+  N
Sbjct: 156 ILDSLVRCYREFGGSNLT----VFDIFIDKFRVLGFLNEASSVFIASISEGFFPTLICCN 211

Query: 505 IMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRK 564
            ++    KA       K+Y  M  A   PD  TY+ V++     G + + + V +EM ++
Sbjct: 212 NLMRDLLKANMMGLFWKVYGSMVEAKIVPDVYTYTNVIKAHCKVGDVIKGKMVLSEMEKE 271

Query: 565 NWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDA 624
                                                +PN+ T N+ +    + G + +A
Sbjct: 272 ------------------------------------CKPNLFTYNAFIGGLCQTGAVDEA 295

Query: 625 YHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGFCHELMAVSGHPAHMFLLSMPSPG 684
             + + M+  GL P   TYTLL+            GFC +        A +   SMPS G
Sbjct: 296 LEVKKLMMEKGLGPDGHTYTLLVD-----------GFCKQ---KRSKEAKLIFESMPSSG 341

Query: 685 --PDGQNVRDHVGSFL------EMMHSEDRESKRGL------VDAVVDFLHKSGLKEEAG 730
             P+       +  F+      E +  +D    RGL       +A++  + K+G   +A 
Sbjct: 342 LNPNRFTYTALIDGFIKEGNIEEALRIKDEMITRGLKLNVVTYNAMIGGIAKAGEMAKAM 401

Query: 731 SVWEVAAQKNVYPDAVKEKGMSYWLINLHVMSDGTAVIALSR----TLAWFRKQMLISGV 786
           S++       + PD      +    +  H M+    ++A  +    T + F   +LISG+
Sbjct: 402 SLFNEMLMAGIEPDTWTYNLLIDGYLKSHDMAKACELLAEMKARKLTPSPFTYSVLISGL 461



 Score = 53.1 bits (126), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 41/178 (23%), Positives = 73/178 (41%)

Query: 362 TYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQM 421
           TYT ++   G+A       +L   M      PN +TY  L+ SY +     + + +FK M
Sbjct: 804 TYTILIDAYGKAEMMEEAEQLFLDMETRNIIPNTLTYTSLLLSYNQIGNRFKMISLFKDM 863

Query: 422 QVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHL 481
           +  G   D + Y  +   + K G    A+ +  K    G+  +   +  +I  L K   +
Sbjct: 864 EARGIACDAIAYGVMASAYCKEGKSLEALKLLNKSLVEGIKLEDDVFDALIFHLCKEKQI 923

Query: 482 QAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYS 539
               +L  EM  +    +  T N ++    K+ N   A K+   MQ  G+ P  ++ +
Sbjct: 924 STVLELLSEMGKEELSLSSKTCNTLLLGFYKSGNEDEASKVLGVMQRLGWVPTSLSLT 981


>gi|255556711|ref|XP_002519389.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223541456|gb|EEF43006.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 634

 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 108/356 (30%), Positives = 168/356 (47%), Gaps = 30/356 (8%)

Query: 343 ALGFFNWLRRQAGFKHDEHTYTTM------VGILGRARQFGAINKLLDQMVRDGCQPNVV 396
           A   F  ++R  G   D +TYTT+      VG++ +AR +       D+M +DGC PNVV
Sbjct: 141 AFQLFQEMKRN-GITPDVYTYTTLLDRFCKVGLIEQARNW------FDEMQQDGCAPNVV 193

Query: 397 TYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKM 456
           TY  LIH+Y +   L+ A ++F+ M   GC P+ VTY  LID H KAG  + A  +Y +M
Sbjct: 194 TYTALIHAYLKTRKLSRANEIFEMMLSNGCVPNIVTYTALIDGHCKAGETEKACQIYARM 253

Query: 457 QAAGL-----------------SPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPN 499
           +   +                  P+  TY  +++ L KA  ++ A  L   M  +GC PN
Sbjct: 254 KNDKVDIPDVDIYFRIVDSELKEPNVVTYGALVDGLCKAHKVKEARDLLETMSLEGCEPN 313

Query: 500 LVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFA 559
            + Y+ +I    K      A +++  M   G  P+  TYS +++ L     LD A  V  
Sbjct: 314 QIIYDALIDGFCKVGKLDEAQEVFTKMLGHGCSPNVYTYSSLIDKLFKDKRLDLALKVLT 373

Query: 560 EMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVG 619
           +M   +  P+  +Y  +VD   K G   +A+     M + G  PNV T  +++  F + G
Sbjct: 374 KMLENSCAPNVVIYTEMVDGLCKVGKTDEAYRLMLMMEEKGCYPNVVTYTAMIDGFGKAG 433

Query: 620 QLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGFCHELMAVSGHPAHM 675
           ++     LLQ M + G  P+  TY +L++ C  A    D     E M  +  P H+
Sbjct: 434 RVDRCLELLQLMTSKGCAPNFITYRVLINHCCAAGLLDDAHKLLEEMKQTYWPKHI 489



 Score =  139 bits (349), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 91/320 (28%), Positives = 149/320 (46%), Gaps = 19/320 (5%)

Query: 347 FNWLRRQ--AGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHS 404
           +N +R     GF  D  TY+ ++G L  A +     +L  +M R+G  P+V TY  L+  
Sbjct: 107 YNVIREMMSKGFIPDSSTYSKVIGYLCNASKVEKAFQLFQEMKRNGITPDVYTYTTLLDR 166

Query: 405 YGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPD 464
           + +   + +A + F +MQ  GC P+ VTY  LI  + K   L  A ++++ M + G  P+
Sbjct: 167 FCKVGLIEQARNWFDEMQQDGCAPNVVTYTALIHAYLKTRKLSRANEIFEMMLSNGCVPN 226

Query: 465 TFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCI-----------------PNLVTYNIMI 507
             TY+ +I+   KAG  + A Q++  M N                     PN+VTY  ++
Sbjct: 227 IVTYTALIDGHCKAGETEKACQIYARMKNDKVDIPDVDIYFRIVDSELKEPNVVTYGALV 286

Query: 508 ALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWV 567
               KA   + A  L   M   G EP+++ Y  +++     G LDEA+ VF +M      
Sbjct: 287 DGLCKAHKVKEARDLLETMSLEGCEPNQIIYDALIDGFCKVGKLDEAQEVFTKMLGHGCS 346

Query: 568 PDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHL 627
           P+   Y  L+D   K   +  A +    ML+    PNV     ++    +VG+  +AY L
Sbjct: 347 PNVYTYSSLIDKLFKDKRLDLALKVLTKMLENSCAPNVVIYTEMVDGLCKVGKTDEAYRL 406

Query: 628 LQGMLNLGLKPSLQTYTLLL 647
           +  M   G  P++ TYT ++
Sbjct: 407 MLMMEEKGCYPNVVTYTAMI 426



 Score =  134 bits (338), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 95/322 (29%), Positives = 146/322 (45%), Gaps = 40/322 (12%)

Query: 362 TYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQM 421
           TY  +V  L +A +      LL+ M  +GC+PN + Y+ LI  + +   L+EA +VF +M
Sbjct: 281 TYGALVDGLCKAHKVKEARDLLETMSLEGCEPNQIIYDALIDGFCKVGKLDEAQEVFTKM 340

Query: 422 QVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHL 481
              GC P+  TY +LID   K   LD+A+ +  KM     +P+   Y+ +++ L K G  
Sbjct: 341 LGHGCSPNVYTYSSLIDKLFKDKRLDLALKVLTKMLENSCAPNVVIYTEMVDGLCKVGKT 400

Query: 482 QAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIV 541
             A++L   M  +GC PN+VTY  MI    KA      L+L + M + G  P+ +TY + 
Sbjct: 401 DEAYRLMLMMEEKGCYPNVVTYTAMIDGFGKAGRVDRCLELLQLMTSKGCAPNFITYRV- 459

Query: 542 MEVLGHC---GYLDEAEAVFAEMRRKNW-------------------------------- 566
             ++ HC   G LD+A  +  EM++  W                                
Sbjct: 460 --LINHCCAAGLLDDAHKLLEEMKQTYWPKHIGMYRKVIEGFSHEFVASLGLLAELSEDG 517

Query: 567 -VPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAY 625
            VP  PVY LL+D + KAG +  A E +E  L +       T  SL+ +     ++  A+
Sbjct: 518 SVPILPVYKLLIDNFIKAGRLEMALELHEE-LSSFSAAYQNTYVSLIESLTLACKVDKAF 576

Query: 626 HLLQGMLNLGLKPSLQTYTLLL 647
            L   M   G  P L     L+
Sbjct: 577 KLYSDMTRRGFVPELSMLVCLI 598



 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 82/287 (28%), Positives = 143/287 (49%), Gaps = 17/287 (5%)

Query: 375 QFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYC 434
           +F     ++ +M+  G  P+  TY+++I     A+ + +A  +F++M+  G  PD  TY 
Sbjct: 102 KFEKAYNVIREMMSKGFIPDSSTYSKVIGYLCNASKVEKAFQLFQEMKRNGITPDVYTYT 161

Query: 435 TLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQ 494
           TL+D   K G ++ A + + +MQ  G +P+  TY+ +I+   K   L  A+++F  M++ 
Sbjct: 162 TLLDRFCKVGLIEQARNWFDEMQQDGCAPNVVTYTALIHAYLKTRKLSRANEIFEMMLSN 221

Query: 495 GCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF-----------------EPDKVT 537
           GC+PN+VTY  +I    KA   + A ++Y  M+N                    EP+ VT
Sbjct: 222 GCVPNIVTYTALIDGHCKAGETEKACQIYARMKNDKVDIPDVDIYFRIVDSELKEPNVVT 281

Query: 538 YSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAML 597
           Y  +++ L     + EA  +   M  +   P++ +Y  L+D + K G + +A E +  ML
Sbjct: 282 YGALVDGLCKAHKVKEARDLLETMSLEGCEPNQIIYDALIDGFCKVGKLDEAQEVFTKML 341

Query: 598 QAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYT 644
             G  PNV T +SL+    +  +L  A  +L  ML     P++  YT
Sbjct: 342 GHGCSPNVYTYSSLIDKLFKDKRLDLALKVLTKMLENSCAPNVVIYT 388



 Score =  123 bits (308), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 97/345 (28%), Positives = 157/345 (45%), Gaps = 62/345 (17%)

Query: 363 YTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLI-------------------H 403
           + ++V    R+  +    KLL +MV  G QP  V YN LI                    
Sbjct: 14  FNSLVHAYCRSGDYFYAYKLLKKMVICGYQPGYVVYNILIGGICSTEDLPSMEVIGLAER 73

Query: 404 SY----------GRANYLN------------EALDVFKQMQVVGCEPDRVTYCTLIDIHA 441
           +Y           + N  N            +A +V ++M   G  PD  TY  +I    
Sbjct: 74  AYNEMLEMGVVLNKVNVCNFTRCLCCIGKFEKAYNVIREMMSKGFIPDSSTYSKVIGYLC 133

Query: 442 KAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLV 501
            A  ++ A  ++++M+  G++PD +TY+ +++   K G ++ A   F EM   GC PN+V
Sbjct: 134 NASKVEKAFQLFQEMKRNGITPDVYTYTTLLDRFCKVGLIEQARNWFDEMQQDGCAPNVV 193

Query: 502 TYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHC--GYLDEAEAVFA 559
           TY  +I    K R    A +++  M + G  P+ VTY+ +++  GHC  G  ++A  ++A
Sbjct: 194 TYTALIHAYLKTRKLSRANEIFEMMLSNGCVPNIVTYTALID--GHCKAGETEKACQIYA 251

Query: 560 EMRR-KNWVPD-------------EP---VYGLLVDLWGKAGNVRKAWEWYEAMLQAGLR 602
            M+  K  +PD             EP    YG LVD   KA  V++A +  E M   G  
Sbjct: 252 RMKNDKVDIPDVDIYFRIVDSELKEPNVVTYGALVDGLCKAHKVKEARDLLETMSLEGCE 311

Query: 603 PNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
           PN    ++L+  F +VG+L +A  +   ML  G  P++ TY+ L+
Sbjct: 312 PNQIIYDALIDGFCKVGKLDEAQEVFTKMLGHGCSPNVYTYSSLI 356



 Score =  113 bits (282), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 96/361 (26%), Positives = 159/361 (44%), Gaps = 47/361 (13%)

Query: 386 MVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGF 445
           M+ +GC P+ + +N L+H+Y R+     A  + K+M + G +P  V Y  LI      G 
Sbjct: 2   MITEGCYPSPMIFNSLVHAYCRSGDYFYAYKLLKKMVICGYQPGYVVYNILI------GG 55

Query: 446 LDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNI 505
           +    D+   M+  GL                      A + + EM+  G + N V    
Sbjct: 56  ICSTEDL-PSMEVIGL----------------------AERAYNEMLEMGVVLNKVNVCN 92

Query: 506 MIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKN 565
                     ++ A  + R+M + GF PD  TYS V+  L +   +++A  +F EM+R  
Sbjct: 93  FTRCLCCIGKFEKAYNVIREMMSKGFIPDSSTYSKVIGYLCNASKVEKAFQLFQEMKRNG 152

Query: 566 WVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAY 625
             PD   Y  L+D + K G + +A  W++ M Q G  PNV T  +L+ A+L+  +LS A 
Sbjct: 153 ITPDVYTYTTLLDRFCKVGLIEQARNWFDEMQQDGCAPNVVTYTALIHAYLKTRKLSRAN 212

Query: 626 HLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGFCHELMAVSGHPAHMFLLSMPSPGP 685
            + + ML+ G  P++ TYT L+            G C    A     A      M +   
Sbjct: 213 EIFEMMLSNGCVPNIVTYTALID-----------GHCK---AGETEKACQIYARMKN--- 255

Query: 686 DGQNVRDHVGSFLEMMHSEDRESKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDA 745
           D  ++ D V  +  ++ SE +E       A+VD L K+   +EA  + E  + +   P+ 
Sbjct: 256 DKVDIPD-VDIYFRIVDSELKEPNVVTYGALVDGLCKAHKVKEARDLLETMSLEGCEPNQ 314

Query: 746 V 746
           +
Sbjct: 315 I 315



 Score = 96.7 bits (239), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 68/276 (24%), Positives = 129/276 (46%), Gaps = 38/276 (13%)

Query: 361 HTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQ 420
           +TY++++  L + ++     K+L +M+ + C PNVV Y  ++    +    +EA  +   
Sbjct: 350 YTYSSLIDKLFKDKRLDLALKVLTKMLENSCAPNVVIYTEMVDGLCKVGKTDEAYRLMLM 409

Query: 421 MQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGH 480
           M+  GC P+ VTY  +ID   KAG +D  +++ + M + G +P+  TY V+IN    AG 
Sbjct: 410 MEEKGCYPNVVTYTAMIDGFGKAGRVDRCLELLQLMTSKGCAPNFITYRVLINHCCAAGL 469

Query: 481 LQAAHQLFCEM---------------------------------VNQGCIPNLVTYNIMI 507
           L  AH+L  EM                                    G +P L  Y ++I
Sbjct: 470 LDDAHKLLEEMKQTYWPKHIGMYRKVIEGFSHEFVASLGLLAELSEDGSVPILPVYKLLI 529

Query: 508 ALQAKARNYQSALKLYRDMQN--AGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKN 565
               KA   + AL+L+ ++ +  A ++    TY  ++E L     +D+A  ++++M R+ 
Sbjct: 530 DNFIKAGRLEMALELHEELSSFSAAYQN---TYVSLIESLTLACKVDKAFKLYSDMTRRG 586

Query: 566 WVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGL 601
           +VP+  +   L+    + G   +A +  +++ Q  +
Sbjct: 587 FVPELSMLVCLIKGLLRVGKWEEALQLSDSICQMDI 622


>gi|449468277|ref|XP_004151848.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At5g14770, mitochondrial-like, partial [Cucumis
           sativus]
          Length = 697

 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 94/309 (30%), Positives = 162/309 (52%), Gaps = 7/309 (2%)

Query: 362 TYTTMVGILGRARQFGAIN---KLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVF 418
           TY+ ++   GR +  G IN     L +M    C PNV+TY+ LI+ Y +   L++A  V 
Sbjct: 131 TYSALID--GRCK-LGDINGAESALHEMEEKDCVPNVITYSSLINGYVKQGLLHDAFKVL 187

Query: 419 KQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKA 478
           ++M      P+  TY  L+D   KAG+ D+A+D+Y KM+  GL  + F     +N + ++
Sbjct: 188 RKMVHKNAMPNICTYAILLDGSFKAGWQDIALDLYSKMKQGGLKDNVFILDAFVNNMKRS 247

Query: 479 GHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTY 538
           G ++ A +L  +M + G  P+LV Y  ++    K+    SAL L ++M +     D VT+
Sbjct: 248 GRMEEAEELVAKMASGGLKPDLVNYTNLMDGFLKSGKVSSALNLAQEMTSKNVVFDIVTF 307

Query: 539 SIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQ 598
           ++++  L   G  D  E++++ MR     PD   Y  +++   K GN   A E +  M  
Sbjct: 308 NVLINCLFKLGKSD-TESIYSAMREMGLSPDLATYNTMLNGNFKKGNWTSALELWNEMKS 366

Query: 599 AGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYD 658
             L PN  TCN +++     G++ +A  +L+ M+ +GL P+  TY +LL+  +++R    
Sbjct: 367 RKLIPNAITCNIMINGLCEAGRMENAIDILKEMVLMGLYPTSTTYRILLNISSKSRRADT 426

Query: 659 MGFCHELMA 667
           +   HEL+ 
Sbjct: 427 ILQTHELLV 435



 Score =  122 bits (305), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 80/295 (27%), Positives = 149/295 (50%), Gaps = 3/295 (1%)

Query: 354 AGFKHDEHTYTTMV-GILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
            G K D   YT ++ G L   +   A+N L  +M       ++VT+N LI+   +    +
Sbjct: 263 GGLKPDLVNYTNLMDGFLKSGKVSSALN-LAQEMTSKNVVFDIVTFNVLINCLFKLGK-S 320

Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
           +   ++  M+ +G  PD  TY T+++ + K G    A++++ +M++  L P+  T +++I
Sbjct: 321 DTESIYSAMREMGLSPDLATYNTMLNGNFKKGNWTSALELWNEMKSRKLIPNAITCNIMI 380

Query: 473 NCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFE 532
           N L +AG ++ A  +  EMV  G  P   TY I++ + +K+R   + L+ +  + N   +
Sbjct: 381 NGLCEAGRMENAIDILKEMVLMGLYPTSTTYRILLNISSKSRRADTILQTHELLVNMQLK 440

Query: 533 PDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEW 592
            DK  Y+I++  L   G   +A AV  +M  +  + D   Y  L+  +  + ++++A+  
Sbjct: 441 VDKDVYNILISNLCKLGMTRKATAVLKDMEERGIIADTTTYNALIHGYCISSHLKRAFMT 500

Query: 593 YEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
           Y  ML   + P++ T N LL    + G + +A  LL  +   GL P+  TY  L+
Sbjct: 501 YSTMLSERVSPDIETYNLLLGGLSKAGLIHEADDLLSEIKKRGLVPNACTYETLM 555



 Score =  120 bits (301), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 79/266 (29%), Positives = 135/266 (50%)

Query: 382 LLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHA 441
           L ++MV  G  P+VVT+  +++   +   L+E   + ++M  +G   + V+Y  L+D   
Sbjct: 11  LYEEMVGSGIFPDVVTFGSILYGLCKHGKLSEGKLLLREMGKMGMNLNNVSYTILLDALF 70

Query: 442 KAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLV 501
           KAG +  A+     M   G + D    +V+I+ L K+G ++ A  LFC +     +PN +
Sbjct: 71  KAGKVAEALMTLACMIVRGNNFDVIACTVLIDGLFKSGQIKEAEYLFCNLYQLNLVPNYI 130

Query: 502 TYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEM 561
           TY+ +I  + K  +   A     +M+     P+ +TYS ++      G L +A  V  +M
Sbjct: 131 TYSALIDGRCKLGDINGAESALHEMEEKDCVPNVITYSSLINGYVKQGLLHDAFKVLRKM 190

Query: 562 RRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQL 621
             KN +P+   Y +L+D   KAG    A + Y  M Q GL+ NV   ++ ++   R G++
Sbjct: 191 VHKNAMPNICTYAILLDGSFKAGWQDIALDLYSKMKQGGLKDNVFILDAFVNNMKRSGRM 250

Query: 622 SDAYHLLQGMLNLGLKPSLQTYTLLL 647
            +A  L+  M + GLKP L  YT L+
Sbjct: 251 EEAEELVAKMASGGLKPDLVNYTNLM 276



 Score =  118 bits (295), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 81/311 (26%), Positives = 149/311 (47%), Gaps = 4/311 (1%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           R+ G   D  TY TM+    +   + +  +L ++M      PN +T N +I+    A  +
Sbjct: 330 REMGLSPDLATYNTMLNGNFKKGNWTSALELWNEMKSRKLIPNAITCNIMINGLCEAGRM 389

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
             A+D+ K+M ++G  P   TY  L++I +K+   D  +  ++ +    L  D   Y+++
Sbjct: 390 ENAIDILKEMVLMGLYPTSTTYRILLNISSKSRRADTILQTHELLVNMQLKVDKDVYNIL 449

Query: 472 INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF 531
           I+ L K G  + A  +  +M  +G I +  TYN +I     + + + A   Y  M +   
Sbjct: 450 ISNLCKLGMTRKATAVLKDMEERGIIADTTTYNALIHGYCISSHLKRAFMTYSTMLSERV 509

Query: 532 EPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWE 591
            PD  TY++++  L   G + EA+ + +E++++  VP+   Y  L+    K  N ++   
Sbjct: 510 SPDIETYNLLLGGLSKAGLIHEADDLLSEIKKRGLVPNACTYETLMCGHCKVRNTKECLR 569

Query: 592 WYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSC-- 649
            Y  M+  G  P     N L+  F ++G++  A  L+  M   G+ P+  TY +L+ C  
Sbjct: 570 IYCEMVIKGFIPKPRAYNMLIGYFSKMGKMKQAKELMNEMQTKGVSPTCTTYDILI-CGW 628

Query: 650 CTEARSPYDMG 660
           C   + P D+G
Sbjct: 629 CNLLKMP-DLG 638



 Score =  108 bits (271), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 79/296 (26%), Positives = 137/296 (46%), Gaps = 1/296 (0%)

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
           + G   +  +YT ++  L +A +       L  M+  G   +V+    LI    ++  + 
Sbjct: 52  KMGMNLNNVSYTILLDALFKAGKVAEALMTLACMIVRGNNFDVIACTVLIDGLFKSGQIK 111

Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
           EA  +F  +  +   P+ +TY  LID   K G ++ A     +M+     P+  TYS +I
Sbjct: 112 EAEYLFCNLYQLNLVPNYITYSALIDGRCKLGDINGAESALHEMEEKDCVPNVITYSSLI 171

Query: 473 NCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFE 532
           N   K G L  A ++  +MV++  +PN+ TY I++    KA     AL LY  M+  G +
Sbjct: 172 NGYVKQGLLHDAFKVLRKMVHKNAMPNICTYAILLDGSFKAGWQDIALDLYSKMKQGGLK 231

Query: 533 PDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEW 592
            +       +  +   G ++EAE + A+M      PD   Y  L+D + K+G V  A   
Sbjct: 232 DNVFILDAFVNNMKRSGRMEEAEELVAKMASGGLKPDLVNYTNLMDGFLKSGKVSSALNL 291

Query: 593 YEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
            + M    +  ++ T N L++   ++G+ SD   +   M  +GL P L TY  +L+
Sbjct: 292 AQEMTSKNVVFDIVTFNVLINCLFKLGK-SDTESIYSAMREMGLSPDLATYNTMLN 346



 Score =  106 bits (264), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 82/312 (26%), Positives = 144/312 (46%), Gaps = 15/312 (4%)

Query: 353 QAGFKHDEHTYTTMVG--ILGRARQFGAI-------------NKLLDQMVRDGCQPNVVT 397
           Q G +     Y  MVG  I      FG+I               LL +M + G   N V+
Sbjct: 2   QNGLEEALTLYEEMVGSGIFPDVVTFGSILYGLCKHGKLSEGKLLLREMGKMGMNLNNVS 61

Query: 398 YNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQ 457
           Y  L+ +  +A  + EAL     M V G   D +    LID   K+G +  A  ++  + 
Sbjct: 62  YTILLDALFKAGKVAEALMTLACMIVRGNNFDVIACTVLIDGLFKSGQIKEAEYLFCNLY 121

Query: 458 AAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQ 517
              L P+  TYS +I+   K G +  A     EM  + C+PN++TY+ +I    K     
Sbjct: 122 QLNLVPNYITYSALIDGRCKLGDINGAESALHEMEEKDCVPNVITYSSLINGYVKQGLLH 181

Query: 518 SALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLV 577
            A K+ R M +    P+  TY+I+++     G+ D A  ++++M++     +  +    V
Sbjct: 182 DAFKVLRKMVHKNAMPNICTYAILLDGSFKAGWQDIALDLYSKMKQGGLKDNVFILDAFV 241

Query: 578 DLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLK 637
           +   ++G + +A E    M   GL+P++    +L+  FL+ G++S A +L Q M +  + 
Sbjct: 242 NNMKRSGRMEEAEELVAKMASGGLKPDLVNYTNLMDGFLKSGKVSSALNLAQEMTSKNVV 301

Query: 638 PSLQTYTLLLSC 649
             + T+ +L++C
Sbjct: 302 FDIVTFNVLINC 313



 Score = 90.9 bits (224), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 79/301 (26%), Positives = 133/301 (44%), Gaps = 35/301 (11%)

Query: 446 LDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNI 505
           L+ A+ +Y++M  +G+ PD  T+  I+  L K G L     L  EM   G   N V+Y I
Sbjct: 5   LEEALTLYEEMVGSGIFPDVVTFGSILYGLCKHGKLSEGKLLLREMGKMGMNLNNVSYTI 64

Query: 506 MIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKN 565
           ++    KA     AL     M   G   D +  +++++ L   G + EAE +F  + + N
Sbjct: 65  LLDALFKAGKVAEALMTLACMIVRGNNFDVIACTVLIDGLFKSGQIKEAEYLFCNLYQLN 124

Query: 566 WVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAY 625
            VP+   Y  L+D   K G++  A      M +    PNV T +SL++ +++ G L DA+
Sbjct: 125 LVPNYITYSALIDGRCKLGDINGAESALHEMEEKDCVPNVITYSSLINGYVKQGLLHDAF 184

Query: 626 HLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGFCHELMAVSGHPAHMFLLSMPSPGP 685
            +L+ M++    P++ TY +LL         +  G+                L + S   
Sbjct: 185 KVLRKMVHKNAMPNICTYAILLD------GSFKAGW------------QDIALDLYSKMK 226

Query: 686 DGQNVRDHVGSFLEMMHSEDRESKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDA 745
            G  ++D+V                 ++DA V+ + +SG  EEA  +    A   + PD 
Sbjct: 227 QG-GLKDNVF----------------ILDAFVNNMKRSGRMEEAEELVAKMASGGLKPDL 269

Query: 746 V 746
           V
Sbjct: 270 V 270


>gi|79317869|ref|NP_001031033.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75178969|sp|Q9LPX2.1|PPR39_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g12775, mitochondrial; Flags: Precursor
 gi|8698724|gb|AAF78482.1|AC012187_2 Contains similarity to an unknown protein F16M19.7 gi|6598837 from
           Arabidopsis thaliana BAC F16M19 gb|AC010795 and contains
           multiple PPR PF|01535 repeats. EST gb|AI999079 comes
           from this gene [Arabidopsis thaliana]
 gi|332190806|gb|AEE28927.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 644

 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 112/389 (28%), Positives = 190/389 (48%), Gaps = 15/389 (3%)

Query: 322 NYSMDAYQANQVLKQL-QDHTV--ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGA 378
           N  +DA + + ++  L +D ++  A   FN +  + GFK D  TY T++G    A ++  
Sbjct: 258 NIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIK-GFKADIITYNTLIGGFCNAGRWDD 316

Query: 379 INKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLID 438
             KLL  M++    PNVVT++ LI S+ +   L EA  + K+M   G  P+ +TY +LID
Sbjct: 317 GAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLID 376

Query: 439 IHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIP 498
              K   L+ A+ M   M + G  PD  T++++IN   KA  +    +LF EM  +G I 
Sbjct: 377 GFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIA 436

Query: 499 NLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVF 558
           N VTYN ++    ++   + A KL+++M +    PD V+Y I+++ L   G L++A  +F
Sbjct: 437 NTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIF 496

Query: 559 AEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRV 618
            ++ +     D  +Y +++     A  V  AW+ + ++   G++ +    N ++S   R 
Sbjct: 497 GKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRK 556

Query: 619 GQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGFCHELMAVSGHPAHM--- 675
             LS A  L + M   G  P   TY +L+                E M  SG PA +   
Sbjct: 557 DSLSKADILFRKMTEEGHAPDELTYNILIRAHLGDDDATTAAELIEEMKSSGFPADVSTV 616

Query: 676 -FLLSMPSPGPDGQNVRDHVGSFLEMMHS 703
             +++M S G   +       SFL+M+ +
Sbjct: 617 KMVINMLSSGELDK-------SFLDMLST 638



 Score =  139 bits (349), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 83/311 (26%), Positives = 155/311 (49%), Gaps = 11/311 (3%)

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
           + G++ D   + T++  L    +     +L+D+MV  G +P ++T N L++       ++
Sbjct: 151 KLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVS 210

Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
           +A+ +  +M   G +P+ VTY  ++++  K+G   +AM++ +KM+   +  D   YS+II
Sbjct: 211 DAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIII 270

Query: 473 NCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFE 532
           + L K G L  A  LF EM  +G   +++TYN +I     A  +    KL RDM      
Sbjct: 271 DGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKIS 330

Query: 533 PDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEW 592
           P+ VT+S++++     G L EA+ +  EM ++   P+   Y  L+D + K   + +A + 
Sbjct: 331 PNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQM 390

Query: 593 YEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTE 652
            + M+  G  P++ T N L++ + +  ++ D   L + M   G+  +  TY  L+     
Sbjct: 391 VDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQ---- 446

Query: 653 ARSPYDMGFCH 663
                  GFC 
Sbjct: 447 -------GFCQ 450



 Score =  132 bits (333), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 73/294 (24%), Positives = 152/294 (51%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           G  H  +T + M+    R R+       + ++++ G +P+ V +N L++       ++EA
Sbjct: 118 GIAHSIYTLSIMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEA 177

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
           L++  +M  +G +P  +T  TL++     G +  A+ +  +M   G  P+  TY  ++N 
Sbjct: 178 LELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNV 237

Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPD 534
           + K+G    A +L  +M  +    + V Y+I+I    K  +  +A  L+ +M+  GF+ D
Sbjct: 238 MCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKAD 297

Query: 535 KVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYE 594
            +TY+ ++    + G  D+   +  +M ++   P+   + +L+D + K G +R+A +  +
Sbjct: 298 IITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLK 357

Query: 595 AMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
            M+Q G+ PN  T NSL+  F +  +L +A  ++  M++ G  P + T+ +L++
Sbjct: 358 EMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILIN 411



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 74/266 (27%), Positives = 136/266 (51%)

Query: 382 LLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHA 441
           L+D+MV  G QPN VTY  +++   ++     A+++ ++M+    + D V Y  +ID   
Sbjct: 215 LIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLC 274

Query: 442 KAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLV 501
           K G LD A +++ +M+  G   D  TY+ +I     AG      +L  +M+ +   PN+V
Sbjct: 275 KDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVV 334

Query: 502 TYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEM 561
           T++++I    K    + A +L ++M   G  P+ +TY+ +++       L+EA  +   M
Sbjct: 335 TFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLM 394

Query: 562 RRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQL 621
             K   PD   + +L++ + KA  +    E +  M   G+  N  T N+L+  F + G+L
Sbjct: 395 ISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKL 454

Query: 622 SDAYHLLQGMLNLGLKPSLQTYTLLL 647
             A  L Q M++  ++P + +Y +LL
Sbjct: 455 EVAKKLFQEMVSRRVRPDIVSYKILL 480



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 76/297 (25%), Positives = 151/297 (50%), Gaps = 4/297 (1%)

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
           + GF+ +E TY  ++ ++ ++ Q     +LL +M     + + V Y+ +I    +   L+
Sbjct: 221 ETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLD 280

Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
            A ++F +M++ G + D +TY TLI     AG  D    + + M    +SP+  T+SV+I
Sbjct: 281 NAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLI 340

Query: 473 NCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFE 532
           +   K G L+ A QL  EM+ +G  PN +TYN +I    K    + A+++   M + G +
Sbjct: 341 DSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCD 400

Query: 533 PDKVTYSIVMEVLGHC--GYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAW 590
           PD +T++I++   G+C    +D+   +F EM  +  + +   Y  LV  + ++G +  A 
Sbjct: 401 PDIMTFNILIN--GYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAK 458

Query: 591 EWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
           + ++ M+   +RP++ +   LL      G+L  A  +   +    ++  +  Y +++
Sbjct: 459 KLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIII 515



 Score =  126 bits (317), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 83/321 (25%), Positives = 155/321 (48%), Gaps = 4/321 (1%)

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
           +   K D   Y+ ++  L +         L ++M   G + +++TYN LI  +  A   +
Sbjct: 256 ERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWD 315

Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
           +   + + M      P+ VT+  LID   K G L  A  + K+M   G++P+T TY+ +I
Sbjct: 316 DGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLI 375

Query: 473 NCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFE 532
           +   K   L+ A Q+   M+++GC P+++T+NI+I    KA      L+L+R+M   G  
Sbjct: 376 DGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVI 435

Query: 533 PDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEW 592
            + VTY+ +++     G L+ A+ +F EM  +   PD   Y +L+D     G + KA E 
Sbjct: 436 ANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEI 495

Query: 593 YEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS--CC 650
           +  + ++ +  ++     ++       ++ DA+ L   +   G+K   + Y +++S  C 
Sbjct: 496 FGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCR 555

Query: 651 TEARSPYDMGFCHELMAVSGH 671
            ++ S  D+ F    M   GH
Sbjct: 556 KDSLSKADILF--RKMTEEGH 574



 Score =  124 bits (312), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 99/394 (25%), Positives = 177/394 (44%), Gaps = 14/394 (3%)

Query: 363 YTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQ 422
           +  +   + + +Q+  +  L  QM   G   ++ T + +I+ + R   L+ A     ++ 
Sbjct: 91  FNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIMINCFCRCRKLSYAFSTMGKIM 150

Query: 423 VVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQ 482
            +G EPD V + TL++       +  A+++  +M   G  P   T + ++N L   G + 
Sbjct: 151 KLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVS 210

Query: 483 AAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVM 542
            A  L   MV  G  PN VTY  ++ +  K+     A++L R M+    + D V YSI++
Sbjct: 211 DAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIII 270

Query: 543 EVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLR 602
           + L   G LD A  +F EM  K +  D   Y  L+  +  AG      +    M++  + 
Sbjct: 271 DGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKIS 330

Query: 603 PNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTY-TLLLSCCTEARSPYDMGF 661
           PNV T + L+ +F++ G+L +A  LL+ M+  G+ P+  TY +L+   C E R    +  
Sbjct: 331 PNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQM 390

Query: 662 CHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRESKRGLV------DA 715
              +++    P  M    + +       + D +  F EM       S RG++      + 
Sbjct: 391 VDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREM-------SLRGVIANTVTYNT 443

Query: 716 VVDFLHKSGLKEEAGSVWEVAAQKNVYPDAVKEK 749
           +V    +SG  E A  +++    + V PD V  K
Sbjct: 444 LVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYK 477



 Score =  105 bits (262), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 67/266 (25%), Positives = 119/266 (44%)

Query: 382 LLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHA 441
           L   M++    P V+ +NRL  +  +       L + KQM+  G      T   +I+   
Sbjct: 75  LFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIMINCFC 134

Query: 442 KAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLV 501
           +   L  A     K+   G  PDT  ++ ++N L     +  A +L   MV  G  P L+
Sbjct: 135 RCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLI 194

Query: 502 TYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEM 561
           T N ++           A+ L   M   GF+P++VTY  V+ V+   G    A  +  +M
Sbjct: 195 TLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKM 254

Query: 562 RRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQL 621
             +N   D   Y +++D   K G++  A+  +  M   G + ++ T N+L+  F   G+ 
Sbjct: 255 EERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRW 314

Query: 622 SDAYHLLQGMLNLGLKPSLQTYTLLL 647
            D   LL+ M+   + P++ T+++L+
Sbjct: 315 DDGAKLLRDMIKRKISPNVVTFSVLI 340


>gi|449469290|ref|XP_004152354.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g52620-like [Cucumis sativus]
 gi|449484425|ref|XP_004156880.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g52620-like [Cucumis sativus]
          Length = 834

 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 91/297 (30%), Positives = 150/297 (50%), Gaps = 1/297 (0%)

Query: 359 DEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVF 418
           D  TY T++       +     KLL+Q +R G  PN +TY  L+H Y +     +A D  
Sbjct: 347 DLVTYNTLINHFCSRGEVEEAEKLLEQTIRRGLAPNKLTYTPLVHGYCKQGEYTKATDYL 406

Query: 419 KQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKA 478
            +M   G E D ++Y  LI     AG +D A+ +  +M   G+ PD   Y+V++N L K 
Sbjct: 407 IEMSTSGLEVDMISYGALIHGLVVAGEVDTALTIRDRMMNRGILPDANIYNVLMNGLFKK 466

Query: 479 GHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTY 538
           G L  A  +  EM++Q   P+   Y  ++    +  N   A KL++ +   G +P  V Y
Sbjct: 467 GKLSMAKVMLTEMLDQNIAPDAFVYATLVDGFIRHGNLDEAKKLFQLIIEKGLDPGVVGY 526

Query: 539 SIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQ 598
           +++++     G +D A     +MRR + VPD   +  ++D + K  N+    + +  M++
Sbjct: 527 NVMIKGFSKSGMMDNAILCIDKMRRAHHVPDIFTFSTIIDGYVKQHNMNAVLKIFGLMVK 586

Query: 599 AGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL-SCCTEAR 654
              +PNV T  SL++ + R G+   A  L   M + GLKPS+ TY++L+ S C EA+
Sbjct: 587 QNCKPNVVTYTSLINGYCRKGETKMAEKLFSMMRSHGLKPSVVTYSILIGSFCKEAK 643



 Score =  129 bits (323), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 94/353 (26%), Positives = 162/353 (45%), Gaps = 9/353 (2%)

Query: 295 GNVVESVSRILRQWKWGPLAEEALGNTNYSMDAYQANQVLKQLQDHTVALGFFNWLRRQA 354
           G + + +  I  +W  G +      NT   +D Y     ++       A   F  L+ + 
Sbjct: 222 GRIEDGIKLIESRWGKGCVPNIVFYNT--LIDGYCKKGEVES------AYKLFKKLKMK- 272

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           GF     T+ ++V    +   F AI+ LL +M   G   NV  YN +I +  +  +  +A
Sbjct: 273 GFIPTLQTFGSLVNGFCKMGMFEAIDLLLLEMKDRGLSVNVQMYNNIIDARYKLGFDIKA 332

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
            D  K+M    CEPD VTY TLI+     G ++ A  + ++    GL+P+  TY+ +++ 
Sbjct: 333 KDTLKEMSENCCEPDLVTYNTLINHFCSRGEVEEAEKLLEQTIRRGLAPNKLTYTPLVHG 392

Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPD 534
             K G    A     EM   G   ++++Y  +I     A    +AL +   M N G  PD
Sbjct: 393 YCKQGEYTKATDYLIEMSTSGLEVDMISYGALIHGLVVAGEVDTALTIRDRMMNRGILPD 452

Query: 535 KVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYE 594
              Y+++M  L   G L  A+ +  EM  +N  PD  VY  LVD + + GN+ +A + ++
Sbjct: 453 ANIYNVLMNGLFKKGKLSMAKVMLTEMLDQNIAPDAFVYATLVDGFIRHGNLDEAKKLFQ 512

Query: 595 AMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
            +++ GL P V   N ++  F + G + +A   +  M      P + T++ ++
Sbjct: 513 LIIEKGLDPGVVGYNVMIKGFSKSGMMDNAILCIDKMRRAHHVPDIFTFSTII 565



 Score =  117 bits (294), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 97/420 (23%), Positives = 172/420 (40%), Gaps = 53/420 (12%)

Query: 359 DEHTYTTMV-GILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDV 417
           D +T + MV G+  + R    I KL++     GC PN+V YN LI  Y +   +  A  +
Sbjct: 207 DNYTTSIMVKGLCLKGRIEDGI-KLIESRWGKGCVPNIVFYNTLIDGYCKKGEVESAYKL 265

Query: 418 FKQMQVVGCEPDRVTYCTL-----------------------------------IDIHAK 442
           FK++++ G  P   T+ +L                                   ID   K
Sbjct: 266 FKKLKMKGFIPTLQTFGSLVNGFCKMGMFEAIDLLLLEMKDRGLSVNVQMYNNIIDARYK 325

Query: 443 AGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVT 502
            GF   A D  K+M      PD  TY+ +IN     G ++ A +L  + + +G  PN +T
Sbjct: 326 LGFDIKAKDTLKEMSENCCEPDLVTYNTLINHFCSRGEVEEAEKLLEQTIRRGLAPNKLT 385

Query: 503 YNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMR 562
           Y  ++    K   Y  A     +M  +G E D ++Y  ++  L   G +D A  +   M 
Sbjct: 386 YTPLVHGYCKQGEYTKATDYLIEMSTSGLEVDMISYGALIHGLVVAGEVDTALTIRDRMM 445

Query: 563 RKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLS 622
            +  +PD  +Y +L++   K G +  A      ML   + P+     +L+  F+R G L 
Sbjct: 446 NRGILPDANIYNVLMNGLFKKGKLSMAKVMLTEMLDQNIAPDAFVYATLVDGFIRHGNLD 505

Query: 623 DAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGFCHELMAVSGHPAHMFLLSMPS 682
           +A  L Q ++  GL P +  Y +++   +++    +   C + M  + H   +F  S   
Sbjct: 506 EAKKLFQLIIEKGLDPGVVGYNVMIKGFSKSGMMDNAILCIDKMRRAHHVPDIFTFSTII 565

Query: 683 PG----------------PDGQNVRDHVGSFLEMMHSEDRESKRGLVDAVVDFLHKSGLK 726
            G                   QN + +V ++  +++   R+ +  + + +   +   GLK
Sbjct: 566 DGYVKQHNMNAVLKIFGLMVKQNCKPNVVTYTSLINGYCRKGETKMAEKLFSMMRSHGLK 625



 Score =  105 bits (261), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 72/289 (24%), Positives = 137/289 (47%), Gaps = 6/289 (2%)

Query: 365 TMVGILGRARQFGAINKLLDQMVR-----DGCQPNVVTYNRLIHSYGRANYLNEALDVFK 419
           +++ +L + R+    ++L D+M+      D C  N  T + ++        + + + + +
Sbjct: 174 SLLNLLVKHRRIETAHQLYDEMIDRDNGDDICVDNYTT-SIMVKGLCLKGRIEDGIKLIE 232

Query: 420 QMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAG 479
                GC P+ V Y TLID + K G ++ A  ++KK++  G  P   T+  ++N   K G
Sbjct: 233 SRWGKGCVPNIVFYNTLIDGYCKKGEVESAYKLFKKLKMKGFIPTLQTFGSLVNGFCKMG 292

Query: 480 HLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYS 539
             +A   L  EM ++G   N+  YN +I  + K      A    ++M     EPD VTY+
Sbjct: 293 MFEAIDLLLLEMKDRGLSVNVQMYNNIIDARYKLGFDIKAKDTLKEMSENCCEPDLVTYN 352

Query: 540 IVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQA 599
            ++      G ++EAE +  +  R+   P++  Y  LV  + K G   KA ++   M  +
Sbjct: 353 TLINHFCSRGEVEEAEKLLEQTIRRGLAPNKLTYTPLVHGYCKQGEYTKATDYLIEMSTS 412

Query: 600 GLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
           GL  ++ +  +L+   +  G++  A  +   M+N G+ P    Y +L++
Sbjct: 413 GLEVDMISYGALIHGLVVAGEVDTALTIRDRMMNRGILPDANIYNVLMN 461



 Score =  102 bits (253), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 81/316 (25%), Positives = 136/316 (43%), Gaps = 15/316 (4%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           G   D + Y  ++  L +  +      +L +M+     P+   Y  L+  + R   L+EA
Sbjct: 448 GILPDANIYNVLMNGLFKKGKLSMAKVMLTEMLDQNIAPDAFVYATLVDGFIRHGNLDEA 507

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
             +F+ +   G +P  V Y  +I   +K+G +D A+    KM+ A   PD FT+S II+ 
Sbjct: 508 KKLFQLIIEKGLDPGVVGYNVMIKGFSKSGMMDNAILCIDKMRRAHHVPDIFTFSTIIDG 567

Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPD 534
             K  ++ A  ++F  MV Q C PN+VTY  +I    +    + A KL+  M++ G +P 
Sbjct: 568 YVKQHNMNAVLKIFGLMVKQNCKPNVVTYTSLINGYCRKGETKMAEKLFSMMRSHGLKPS 627

Query: 535 KVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAG---------- 584
            VTYSI++        L +A + F  M      P++  +  LV+ +              
Sbjct: 628 VVTYSILIGSFCKEAKLGKAVSYFELMLINKCTPNDAAFHYLVNGFTNTKATAVSREPNN 687

Query: 585 ---NVRKAWE-WYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSL 640
              N R  +E ++  M+  G        N +L    +   +  A  L   ML  GL    
Sbjct: 688 LHENSRSMFEDFFSRMIGDGWTQKAAAYNCILICLCQQRMVKTALQLRNKMLAFGLCSDA 747

Query: 641 QTYTLLL-SCCTEARS 655
            ++  L+   C E  S
Sbjct: 748 VSFVALIHGICLEGNS 763



 Score = 96.7 bits (239), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 82/328 (25%), Positives = 142/328 (43%), Gaps = 13/328 (3%)

Query: 290 HFASTGNVVESVSRILRQWKWGPLAEEALGNTNYSMDAYQANQVLKQLQDHTVALGFFNW 349
           HF S G V E   ++L Q     LA   L  T   +  Y       +  D+ + +     
Sbjct: 357 HFCSRGEV-EEAEKLLEQTIRRGLAPNKLTYTPL-VHGYCKQGEYTKATDYLIEMS---- 410

Query: 350 LRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRAN 409
               +G + D  +Y  ++  L  A +      + D+M+  G  P+   YN L++   +  
Sbjct: 411 ---TSGLEVDMISYGALIHGLVVAGEVDTALTIRDRMMNRGILPDANIYNVLMNGLFKKG 467

Query: 410 YLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYS 469
            L+ A  +  +M      PD   Y TL+D   + G LD A  +++ +   GL P    Y+
Sbjct: 468 KLSMAKVMLTEMLDQNIAPDAFVYATLVDGFIRHGNLDEAKKLFQLIIEKGLDPGVVGYN 527

Query: 470 VIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNA 529
           V+I    K+G +  A     +M     +P++ T++ +I    K  N  + LK++  M   
Sbjct: 528 VMIKGFSKSGMMDNAILCIDKMRRAHHVPDIFTFSTIIDGYVKQHNMNAVLKIFGLMVKQ 587

Query: 530 GFEPDKVTYSIVMEVLGHC--GYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVR 587
             +P+ VTY+ ++   G+C  G    AE +F+ MR     P    Y +L+  + K   + 
Sbjct: 588 NCKPNVVTYTSLIN--GYCRKGETKMAEKLFSMMRSHGLKPSVVTYSILIGSFCKEAKLG 645

Query: 588 KAWEWYEAMLQAGLRPNVPTCNSLLSAF 615
           KA  ++E ML     PN    + L++ F
Sbjct: 646 KAVSYFELMLINKCTPNDAAFHYLVNGF 673



 Score = 85.9 bits (211), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 87/377 (23%), Positives = 157/377 (41%), Gaps = 58/377 (15%)

Query: 418 FKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLS-PDTFTYSVIINCLG 476
            ++M+     P R     ++  +A  G +D A+++Y  +     S P T+  + ++N L 
Sbjct: 121 LEEMKTKETIPTREALSDVLCAYADVGLVDKALEVYHGVVKLHNSLPSTYACNSLLNLLV 180

Query: 477 KAGHLQAAHQLFCEMVN---------------------------------------QGCI 497
           K   ++ AHQL+ EM++                                       +GC+
Sbjct: 181 KHRRIETAHQLYDEMIDRDNGDDICVDNYTTSIMVKGLCLKGRIEDGIKLIESRWGKGCV 240

Query: 498 PNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAV 557
           PN+V YN +I    K    +SA KL++ ++  GF P   T+  ++      G  +  + +
Sbjct: 241 PNIVFYNTLIDGYCKKGEVESAYKLFKKLKMKGFIPTLQTFGSLVNGFCKMGMFEAIDLL 300

Query: 558 FAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLR 617
             EM+ +    +  +Y  ++D   K G   KA +  + M +    P++ T N+L++ F  
Sbjct: 301 LLEMKDRGLSVNVQMYNNIIDARYKLGFDIKAKDTLKEMSENCCEPDLVTYNTLINHFCS 360

Query: 618 VGQLSDAYHLLQGMLNLGLKPSLQTYT-LLLSCCTEARSPYDMGFCHELMAVSGHPAHMF 676
            G++ +A  LL+  +  GL P+  TYT L+   C +        +  E M+ SG    M 
Sbjct: 361 RGEVEEAEKLLEQTIRRGLAPNKLTYTPLVHGYCKQGEYTKATDYLIE-MSTSGLEVDMI 419

Query: 677 LLSMPSPGP--DGQNVRDHVGSFLEMMHSEDRESKRGLV------DAVVDFLHKSGLKEE 728
                S G    G  V   V + L +    DR   RG++      + +++ L K G    
Sbjct: 420 -----SYGALIHGLVVAGEVDTALTI---RDRMMNRGILPDANIYNVLMNGLFKKGKLSM 471

Query: 729 AGSVWEVAAQKNVYPDA 745
           A  +      +N+ PDA
Sbjct: 472 AKVMLTEMLDQNIAPDA 488


>gi|449523852|ref|XP_004168937.1| PREDICTED: pentatricopeptide repeat-containing protein At5g14770,
           mitochondrial-like [Cucumis sativus]
          Length = 683

 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 92/308 (29%), Positives = 159/308 (51%), Gaps = 4/308 (1%)

Query: 363 YTTMVGILGRARQFGAIN---KLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFK 419
           Y T   ++    + G IN     L +M    C PNV+TY+ LI+ Y +   L++A  V +
Sbjct: 115 YITYSALIDSRCKLGDINGAESALHEMEEKDCVPNVITYSSLINGYVKQGLLHDAFKVLR 174

Query: 420 QMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAG 479
           +M      P+  TY  L+D   KAG+ D+A+D+Y KM+  GL  + F     +N + ++G
Sbjct: 175 KMVHKNAMPNICTYAILLDGSFKAGWQDIALDLYSKMKQGGLKDNVFILDAFVNNMKRSG 234

Query: 480 HLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYS 539
            ++ A +L  +M + G  P+LV Y  ++    K+    SAL L ++M +     D VT++
Sbjct: 235 RMEEAEELVAKMASGGLKPDLVNYTNLMDGFLKSGKVSSALNLAQEMTSKNVVFDIVTFN 294

Query: 540 IVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQA 599
           +++  L   G  D  E++++ MR     PD   Y  +++   K GN   A E +  M   
Sbjct: 295 VLINCLFKLGKSD-TESIYSAMREMGLSPDLATYNTMLNGNFKKGNWTSALELWNEMKSR 353

Query: 600 GLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDM 659
            L PN  TCN +++     G++ +A  +L+ M+ +GL P+  TY +LL+  +++R    +
Sbjct: 354 KLIPNAITCNIMINGLCEAGRMENAIDILKEMVLMGLYPTSTTYRILLNISSKSRRADTI 413

Query: 660 GFCHELMA 667
              HEL+ 
Sbjct: 414 LQTHELLV 421



 Score =  122 bits (306), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 80/295 (27%), Positives = 149/295 (50%), Gaps = 3/295 (1%)

Query: 354 AGFKHDEHTYTTMV-GILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
            G K D   YT ++ G L   +   A+N L  +M       ++VT+N LI+   +    +
Sbjct: 249 GGLKPDLVNYTNLMDGFLKSGKVSSALN-LAQEMTSKNVVFDIVTFNVLINCLFKLGK-S 306

Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
           +   ++  M+ +G  PD  TY T+++ + K G    A++++ +M++  L P+  T +++I
Sbjct: 307 DTESIYSAMREMGLSPDLATYNTMLNGNFKKGNWTSALELWNEMKSRKLIPNAITCNIMI 366

Query: 473 NCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFE 532
           N L +AG ++ A  +  EMV  G  P   TY I++ + +K+R   + L+ +  + N   +
Sbjct: 367 NGLCEAGRMENAIDILKEMVLMGLYPTSTTYRILLNISSKSRRADTILQTHELLVNMQLK 426

Query: 533 PDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEW 592
            DK  Y+I++  L   G   +A AV  +M  +  + D   Y  L+  +  + ++++A+  
Sbjct: 427 VDKDVYNILISNLCKLGMTRKATAVLKDMEERGIIADTTTYNALIHGYCISSHLKRAFMT 486

Query: 593 YEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
           Y  ML   + P++ T N LL    + G + +A  LL  +   GL P+  TY  L+
Sbjct: 487 YSTMLSERVSPDIETYNLLLGGLSKAGLIHEADDLLSEIKKRGLVPNACTYETLM 541



 Score =  118 bits (296), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 78/262 (29%), Positives = 132/262 (50%)

Query: 386 MVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGF 445
           MV  G  P+VVT+  +++   +   L+E   + ++M  +G   + V+Y  L+D   KAG 
Sbjct: 1   MVGSGIFPDVVTFGSILYGLCKHGKLSEGKLLLREMGKMGMNLNNVSYTILLDALFKAGK 60

Query: 446 LDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNI 505
           +  A+     M   G + D    +V+I+ L K+G ++ A  LFC +     +PN +TY+ 
Sbjct: 61  VAEALMTLACMIVRGNNFDVIACTVLIDGLFKSGQIKEAEYLFCNLYQLNLVPNYITYSA 120

Query: 506 MIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKN 565
           +I  + K  +   A     +M+     P+ +TYS ++      G L +A  V  +M  KN
Sbjct: 121 LIDSRCKLGDINGAESALHEMEEKDCVPNVITYSSLINGYVKQGLLHDAFKVLRKMVHKN 180

Query: 566 WVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAY 625
            +P+   Y +L+D   KAG    A + Y  M Q GL+ NV   ++ ++   R G++ +A 
Sbjct: 181 AMPNICTYAILLDGSFKAGWQDIALDLYSKMKQGGLKDNVFILDAFVNNMKRSGRMEEAE 240

Query: 626 HLLQGMLNLGLKPSLQTYTLLL 647
            L+  M + GLKP L  YT L+
Sbjct: 241 ELVAKMASGGLKPDLVNYTNLM 262



 Score =  118 bits (296), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 81/311 (26%), Positives = 149/311 (47%), Gaps = 4/311 (1%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           R+ G   D  TY TM+    +   + +  +L ++M      PN +T N +I+    A  +
Sbjct: 316 REMGLSPDLATYNTMLNGNFKKGNWTSALELWNEMKSRKLIPNAITCNIMINGLCEAGRM 375

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
             A+D+ K+M ++G  P   TY  L++I +K+   D  +  ++ +    L  D   Y+++
Sbjct: 376 ENAIDILKEMVLMGLYPTSTTYRILLNISSKSRRADTILQTHELLVNMQLKVDKDVYNIL 435

Query: 472 INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF 531
           I+ L K G  + A  +  +M  +G I +  TYN +I     + + + A   Y  M +   
Sbjct: 436 ISNLCKLGMTRKATAVLKDMEERGIIADTTTYNALIHGYCISSHLKRAFMTYSTMLSERV 495

Query: 532 EPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWE 591
            PD  TY++++  L   G + EA+ + +E++++  VP+   Y  L+    K  N ++   
Sbjct: 496 SPDIETYNLLLGGLSKAGLIHEADDLLSEIKKRGLVPNACTYETLMCGHCKVRNTKECLR 555

Query: 592 WYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSC-- 649
            Y  M+  G  P     N L+  F ++G++  A  L+  M   G+ P+  TY +L+ C  
Sbjct: 556 IYCEMVIKGFIPKPRAYNMLIGYFSKMGKMKQAKELMNEMQTKGVSPTCTTYDILI-CGW 614

Query: 650 CTEARSPYDMG 660
           C   + P D+G
Sbjct: 615 CNLLKMP-DLG 624



 Score =  109 bits (273), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 79/296 (26%), Positives = 137/296 (46%), Gaps = 1/296 (0%)

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
           + G   +  +YT ++  L +A +       L  M+  G   +V+    LI    ++  + 
Sbjct: 38  KMGMNLNNVSYTILLDALFKAGKVAEALMTLACMIVRGNNFDVIACTVLIDGLFKSGQIK 97

Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
           EA  +F  +  +   P+ +TY  LID   K G ++ A     +M+     P+  TYS +I
Sbjct: 98  EAEYLFCNLYQLNLVPNYITYSALIDSRCKLGDINGAESALHEMEEKDCVPNVITYSSLI 157

Query: 473 NCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFE 532
           N   K G L  A ++  +MV++  +PN+ TY I++    KA     AL LY  M+  G +
Sbjct: 158 NGYVKQGLLHDAFKVLRKMVHKNAMPNICTYAILLDGSFKAGWQDIALDLYSKMKQGGLK 217

Query: 533 PDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEW 592
            +       +  +   G ++EAE + A+M      PD   Y  L+D + K+G V  A   
Sbjct: 218 DNVFILDAFVNNMKRSGRMEEAEELVAKMASGGLKPDLVNYTNLMDGFLKSGKVSSALNL 277

Query: 593 YEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
            + M    +  ++ T N L++   ++G+ SD   +   M  +GL P L TY  +L+
Sbjct: 278 AQEMTSKNVVFDIVTFNVLINCLFKLGK-SDTESIYSAMREMGLSPDLATYNTMLN 332



 Score =  106 bits (264), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 72/268 (26%), Positives = 132/268 (49%)

Query: 382 LLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHA 441
           LL +M + G   N V+Y  L+ +  +A  + EAL     M V G   D +    LID   
Sbjct: 32  LLREMGKMGMNLNNVSYTILLDALFKAGKVAEALMTLACMIVRGNNFDVIACTVLIDGLF 91

Query: 442 KAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLV 501
           K+G +  A  ++  +    L P+  TYS +I+   K G +  A     EM  + C+PN++
Sbjct: 92  KSGQIKEAEYLFCNLYQLNLVPNYITYSALIDSRCKLGDINGAESALHEMEEKDCVPNVI 151

Query: 502 TYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEM 561
           TY+ +I    K      A K+ R M +    P+  TY+I+++     G+ D A  ++++M
Sbjct: 152 TYSSLINGYVKQGLLHDAFKVLRKMVHKNAMPNICTYAILLDGSFKAGWQDIALDLYSKM 211

Query: 562 RRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQL 621
           ++     +  +    V+   ++G + +A E    M   GL+P++    +L+  FL+ G++
Sbjct: 212 KQGGLKDNVFILDAFVNNMKRSGRMEEAEELVAKMASGGLKPDLVNYTNLMDGFLKSGKV 271

Query: 622 SDAYHLLQGMLNLGLKPSLQTYTLLLSC 649
           S A +L Q M +  +   + T+ +L++C
Sbjct: 272 SSALNLAQEMTSKNVVFDIVTFNVLINC 299



 Score = 84.0 bits (206), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 76/291 (26%), Positives = 125/291 (42%), Gaps = 35/291 (12%)

Query: 456 MQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARN 515
           M  +G+ PD  T+  I+  L K G L     L  EM   G   N V+Y I++    KA  
Sbjct: 1   MVGSGIFPDVVTFGSILYGLCKHGKLSEGKLLLREMGKMGMNLNNVSYTILLDALFKAGK 60

Query: 516 YQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGL 575
              AL     M   G   D +  +++++ L   G + EAE +F  + + N VP+   Y  
Sbjct: 61  VAEALMTLACMIVRGNNFDVIACTVLIDGLFKSGQIKEAEYLFCNLYQLNLVPNYITYSA 120

Query: 576 LVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLG 635
           L+D   K G++  A      M +    PNV T +SL++ +++ G L DA+ +L+ M++  
Sbjct: 121 LIDSRCKLGDINGAESALHEMEEKDCVPNVITYSSLINGYVKQGLLHDAFKVLRKMVHKN 180

Query: 636 LKPSLQTYTLLLSCCTEARSPYDMGFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVG 695
             P++ TY +LL         +  G+                L + S    G  ++D+V 
Sbjct: 181 AMPNICTYAILLD------GSFKAGW------------QDIALDLYSKMKQG-GLKDNVF 221

Query: 696 SFLEMMHSEDRESKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAV 746
                           ++DA V+ + +SG  EEA  +    A   + PD V
Sbjct: 222 ----------------ILDAFVNNMKRSGRMEEAEELVAKMASGGLKPDLV 256


>gi|356503775|ref|XP_003520679.1| PREDICTED: pentatricopeptide repeat-containing protein At5g12100,
           mitochondrial-like [Glycine max]
          Length = 777

 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 93/301 (30%), Positives = 157/301 (52%), Gaps = 3/301 (0%)

Query: 349 WLRR--QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYG 406
           W+RR  + G      TY +++   G+   F    + LD+M + G +PNV++Y  LI+   
Sbjct: 417 WVRRMVEKGVSPTVETYNSLINGYGQKGHFVRCFEFLDEMDKAGIKPNVISYGSLINCLC 476

Query: 407 RANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTF 466
           +   L +A  V   M   G  P+   Y  LI+       L  A   + +M  +G+     
Sbjct: 477 KDRKLIDAEIVLADMIGRGVSPNAEIYNMLIEASCSLSKLKDAFRFFDEMIQSGIDATLV 536

Query: 467 TYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDM 526
           TY+ +IN LG+ G ++ A  LF +M  +GC P+++TYN +I+  AK+ N Q  L+LY  M
Sbjct: 537 TYNTLINGLGRNGRVKKAEDLFLQMAGKGCNPDVITYNSLISGYAKSVNTQKCLELYDKM 596

Query: 527 QNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNV 586
           +  G +P   T+  ++      G +   + +F EM + + VPD+ VY  ++  + + GNV
Sbjct: 597 KILGIKPTVGTFHPLIYACRKEGVV-TMDKMFQEMLQMDLVPDQFVYNEMIYSYAEDGNV 655

Query: 587 RKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLL 646
            KA   ++ M+  G+  +  T NSL+ A+LR  ++S+  HL+  M   GL P + TY +L
Sbjct: 656 MKAMSLHQQMVDQGVDCDKVTYNSLILAYLRDRRVSEIKHLVDDMKAKGLVPKVDTYNIL 715

Query: 647 L 647
           +
Sbjct: 716 I 716



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 84/292 (28%), Positives = 144/292 (49%)

Query: 359 DEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVF 418
           DE TY  ++  L R  +     ++L ++V +G  P+ ++YN L+++Y +   + +A+   
Sbjct: 324 DERTYCILLNGLCRVGRIEKAEEVLAKLVENGVTPSKISYNILVNAYCQEGDVKKAILTT 383

Query: 419 KQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKA 478
           +QM+  G EP+R+T+ T+I    + G +D A    ++M   G+SP   TY+ +IN  G+ 
Sbjct: 384 EQMEERGLEPNRITFNTVISKFCETGEVDHAETWVRRMVEKGVSPTVETYNSLINGYGQK 443

Query: 479 GHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTY 538
           GH     +   EM   G  PN+++Y  +I    K R    A  +  DM   G  P+   Y
Sbjct: 444 GHFVRCFEFLDEMDKAGIKPNVISYGSLINCLCKDRKLIDAEIVLADMIGRGVSPNAEIY 503

Query: 539 SIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQ 598
           ++++E       L +A   F EM +         Y  L++  G+ G V+KA + +  M  
Sbjct: 504 NMLIEASCSLSKLKDAFRFFDEMIQSGIDATLVTYNTLINGLGRNGRVKKAEDLFLQMAG 563

Query: 599 AGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCC 650
            G  P+V T NSL+S + +         L   M  LG+KP++ T+  L+  C
Sbjct: 564 KGCNPDVITYNSLISGYAKSVNTQKCLELYDKMKILGIKPTVGTFHPLIYAC 615



 Score =  124 bits (310), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 73/264 (27%), Positives = 128/264 (48%), Gaps = 1/264 (0%)

Query: 384 DQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKA 443
           +QM   G +PN +T+N +I  +     ++ A    ++M   G  P   TY +LI+ + + 
Sbjct: 384 EQMEERGLEPNRITFNTVISKFCETGEVDHAETWVRRMVEKGVSPTVETYNSLINGYGQK 443

Query: 444 GFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTY 503
           G      +   +M  AG+ P+  +Y  +INCL K   L  A  +  +M+ +G  PN   Y
Sbjct: 444 GHFVRCFEFLDEMDKAGIKPNVISYGSLINCLCKDRKLIDAEIVLADMIGRGVSPNAEIY 503

Query: 504 NIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRR 563
           N++I         + A + + +M  +G +   VTY+ ++  LG  G + +AE +F +M  
Sbjct: 504 NMLIEASCSLSKLKDAFRFFDEMIQSGIDATLVTYNTLINGLGRNGRVKKAEDLFLQMAG 563

Query: 564 KNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSD 623
           K   PD   Y  L+  + K+ N +K  E Y+ M   G++P V T + L+ A  + G ++ 
Sbjct: 564 KGCNPDVITYNSLISGYAKSVNTQKCLELYDKMKILGIKPTVGTFHPLIYACRKEGVVT- 622

Query: 624 AYHLLQGMLNLGLKPSLQTYTLLL 647
              + Q ML + L P    Y  ++
Sbjct: 623 MDKMFQEMLQMDLVPDQFVYNEMI 646



 Score =  117 bits (294), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 87/341 (25%), Positives = 151/341 (44%), Gaps = 70/341 (20%)

Query: 378 AINKLLDQ-------MVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDR 430
           +++K+LD+       M +DG  P+  + NRL+ +   + +  + L VF  +   G  PD 
Sbjct: 98  SVSKMLDEATDLYSTMRKDGFVPSTRSVNRLLRTLVDSRHFEKTLAVFADVIDSGTRPDA 157

Query: 431 VTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCE 490
           V Y   +        LD   ++ K M   G+ P  F Y++++  L K   ++ A +LF E
Sbjct: 158 VAYGKAVQAAVMLKDLDKGFELMKSMVKDGMGPSVFAYNLVLGGLCKVRRIKDARKLFDE 217

Query: 491 MVNQGCIPNLVTYNIMI-----------ALQAKAR-----------NYQSAL-------- 520
           M+ +  +PN VTYN +I           AL  K R            Y S L        
Sbjct: 218 MIQRNMVPNTVTYNTLIDGYCKVGGIEEALGFKERMKEQNVECNLVTYNSLLNGLCGSGR 277

Query: 521 -----KLYRDMQNAGFEP----------------------------DKVTYSIVMEVLGH 547
                ++  +M+ +GF P                            D+ TY I++  L  
Sbjct: 278 VDDAREVLLEMEGSGFLPGGFLSFVFDDHSNGAGDDGLFDGKEIRIDERTYCILLNGLCR 337

Query: 548 CGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPT 607
            G +++AE V A++      P +  Y +LV+ + + G+V+KA    E M + GL PN  T
Sbjct: 338 VGRIEKAEEVLAKLVENGVTPSKISYNILVNAYCQEGDVKKAILTTEQMEERGLEPNRIT 397

Query: 608 CNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
            N+++S F   G++  A   ++ M+  G+ P+++TY  L++
Sbjct: 398 FNTVISKFCETGEVDHAETWVRRMVEKGVSPTVETYNSLIN 438



 Score =  109 bits (272), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 70/306 (22%), Positives = 137/306 (44%), Gaps = 28/306 (9%)

Query: 381 KLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIH 440
           +L+  MV+DG  P+V  YN ++    +   + +A  +F +M      P+ VTY TLID +
Sbjct: 178 ELMKSMVKDGMGPSVFAYNLVLGGLCKVRRIKDARKLFDEMIQRNMVPNTVTYNTLIDGY 237

Query: 441 AKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIP-- 498
            K G ++ A+   ++M+   +  +  TY+ ++N L  +G +  A ++  EM   G +P  
Sbjct: 238 CKVGGIEEALGFKERMKEQNVECNLVTYNSLLNGLCGSGRVDDAREVLLEMEGSGFLPGG 297

Query: 499 --------------------------NLVTYNIMIALQAKARNYQSALKLYRDMQNAGFE 532
                                     +  TY I++    +    + A ++   +   G  
Sbjct: 298 FLSFVFDDHSNGAGDDGLFDGKEIRIDERTYCILLNGLCRVGRIEKAEEVLAKLVENGVT 357

Query: 533 PDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEW 592
           P K++Y+I++      G + +A     +M  +   P+   +  ++  + + G V  A  W
Sbjct: 358 PSKISYNILVNAYCQEGDVKKAILTTEQMEERGLEPNRITFNTVISKFCETGEVDHAETW 417

Query: 593 YEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTE 652
              M++ G+ P V T NSL++ + + G     +  L  M   G+KP++ +Y  L++C  +
Sbjct: 418 VRRMVEKGVSPTVETYNSLINGYGQKGHFVRCFEFLDEMDKAGIKPNVISYGSLINCLCK 477

Query: 653 ARSPYD 658
            R   D
Sbjct: 478 DRKLID 483



 Score = 89.7 bits (221), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 73/269 (27%), Positives = 120/269 (44%), Gaps = 42/269 (15%)

Query: 329 QANQVLKQLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVR 388
           +A+  L +L+D   A  FF+ +  Q+G      TY T++  LGR  +      L  QM  
Sbjct: 508 EASCSLSKLKD---AFRFFDEMI-QSGIDATLVTYNTLINGLGRNGRVKKAEDLFLQMAG 563

Query: 389 DGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDV 448
            GC P+V+TYN LI  Y ++    + L+++ +M+++G +P   T+  LI    K G   V
Sbjct: 564 KGCNPDVITYNSLISGYAKSVNTQKCLELYDKMKILGIKPTVGTFHPLIYACRKEGV--V 621

Query: 449 AMD-MYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGC----------- 496
            MD M+++M    L PD F Y+ +I    + G++  A  L  +MV+QG            
Sbjct: 622 TMDKMFQEMLQMDLVPDQFVYNEMIYSYAEDGNVMKAMSLHQQMVDQGVDCDKVTYNSLI 681

Query: 497 ------------------------IPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFE 532
                                   +P + TYNI+I      +++  A   YR+M   G  
Sbjct: 682 LAYLRDRRVSEIKHLVDDMKAKGLVPKVDTYNILIKGLCDLKDFNGAYFWYREMVERGLL 741

Query: 533 PDKVTYSIVMEVLGHCGYLDEAEAVFAEM 561
            +      ++  L   G L EA+ V +E+
Sbjct: 742 LNVSMCYQLISGLREEGMLREAQIVSSEL 770



 Score = 55.1 bits (131), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 35/142 (24%), Positives = 67/142 (47%)

Query: 506 MIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKN 565
           ++ L + ++    A  LY  M+  GF P   + + ++  L    + ++  AVFA++    
Sbjct: 93  LLWLCSVSKMLDEATDLYSTMRKDGFVPSTRSVNRLLRTLVDSRHFEKTLAVFADVIDSG 152

Query: 566 WVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAY 625
             PD   YG  V       ++ K +E  ++M++ G+ P+V   N +L    +V ++ DA 
Sbjct: 153 TRPDAVAYGKAVQAAVMLKDLDKGFELMKSMVKDGMGPSVFAYNLVLGGLCKVRRIKDAR 212

Query: 626 HLLQGMLNLGLKPSLQTYTLLL 647
            L   M+   + P+  TY  L+
Sbjct: 213 KLFDEMIQRNMVPNTVTYNTLI 234



 Score = 44.3 bits (103), Expect = 0.33,   Method: Compositional matrix adjust.
 Identities = 25/108 (23%), Positives = 49/108 (45%)

Query: 551 LDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNS 610
           LDEA  +++ MR+  +VP       L+     + +  K    +  ++ +G RP+      
Sbjct: 103 LDEATDLYSTMRKDGFVPSTRSVNRLLRTLVDSRHFEKTLAVFADVIDSGTRPDAVAYGK 162

Query: 611 LLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYD 658
            + A + +  L   + L++ M+  G+ PS+  Y L+L    + R   D
Sbjct: 163 AVQAAVMLKDLDKGFELMKSMVKDGMGPSVFAYNLVLGGLCKVRRIKD 210


>gi|255575351|ref|XP_002528578.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223531974|gb|EEF33786.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 817

 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 93/301 (30%), Positives = 152/301 (50%), Gaps = 3/301 (0%)

Query: 349 WLRRQA--GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYG 406
           W+++ A  G      TY T++   G+   F    ++L+QM   G +PNVV+Y  LI+   
Sbjct: 443 WVKKMAEKGVTPSVETYNTLIDGYGKLCTFDRCFQILEQMEEIGVKPNVVSYGSLINCLC 502

Query: 407 RANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTF 466
           +   + EA  V + M   G  P+   Y  LID     G +  A+  + +M  + +SP   
Sbjct: 503 KDGKILEAEIVLRDMICRGVLPNAQVYNMLIDGSCMVGKVKDALRFFDEMMRSEISPTLV 562

Query: 467 TYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDM 526
           TY+V+I+ L K G L  A     ++ + G  P+++TYN +I+  A A N    L LY  M
Sbjct: 563 TYNVLIDGLCKKGKLTEAEDFLTQITSSGHSPDVITYNSLISGYANAGNVSKCLGLYETM 622

Query: 527 QNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNV 586
           +N G +P   TY  ++      G ++  E ++ EM + N +PD  VY  ++  + + GN 
Sbjct: 623 KNLGIKPTVRTYHPLISGCSKEG-IELVEKLYNEMLQMNLLPDRVVYNAMIHCYAEIGNT 681

Query: 587 RKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLL 646
           +KA+  ++ ML  G+ P+  T NSL+    R G+LS+   L+  M    L P   TY +L
Sbjct: 682 QKAYSLHQGMLDQGIHPDKMTYNSLILGHFREGKLSNIKDLVNNMKAKELAPKADTYDIL 741

Query: 647 L 647
           +
Sbjct: 742 V 742



 Score =  142 bits (357), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 96/327 (29%), Positives = 152/327 (46%), Gaps = 8/327 (2%)

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINK---LLDQMVRDGCQPNVVTYNRLIHSYGRAN 409
           + G   DE  Y T V   G  R  G +NK    +++M   G +PN +T+N LI  +    
Sbjct: 379 ENGLVADEVIYNTFVN--GYCR-IGDMNKAILTIERMESFGLRPNSITFNSLIDKFCDMK 435

Query: 410 YLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYS 469
            +++A +  K+M   G  P   TY TLID + K    D    + ++M+  G+ P+  +Y 
Sbjct: 436 EMDKAEEWVKKMAEKGVTPSVETYNTLIDGYGKLCTFDRCFQILEQMEEIGVKPNVVSYG 495

Query: 470 VIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNA 529
            +INCL K G +  A  +  +M+ +G +PN   YN++I         + AL+ + +M  +
Sbjct: 496 SLINCLCKDGKILEAEIVLRDMICRGVLPNAQVYNMLIDGSCMVGKVKDALRFFDEMMRS 555

Query: 530 GFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKA 589
              P  VTY+++++ L   G L EAE    ++      PD   Y  L+  +  AGNV K 
Sbjct: 556 EISPTLVTYNVLIDGLCKKGKLTEAEDFLTQITSSGHSPDVITYNSLISGYANAGNVSKC 615

Query: 590 WEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSC 649
              YE M   G++P V T + L+S   + G +     L   ML + L P    Y  ++ C
Sbjct: 616 LGLYETMKNLGIKPTVRTYHPLISGCSKEG-IELVEKLYNEMLQMNLLPDRVVYNAMIHC 674

Query: 650 CTEARSPYDMGFCHELMAVSG-HPAHM 675
             E  +       H+ M   G HP  M
Sbjct: 675 YAEIGNTQKAYSLHQGMLDQGIHPDKM 701



 Score =  139 bits (351), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 85/294 (28%), Positives = 144/294 (48%)

Query: 354 AGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNE 413
           +GF+ D   Y   +    + +      + LD M + G +PNV  YN LI    R   + +
Sbjct: 170 SGFRTDTFMYAKAIQAAVKLQNLKMGMEFLDSMRKRGVRPNVFIYNVLIGGLCREKRIRD 229

Query: 414 ALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIIN 473
           A  +F +M  +      VTY TLID + K G LD A  M ++M+   ++P+  T++ +++
Sbjct: 230 AEKMFDEMCNINLVGSIVTYNTLIDGYCKVGELDAAFKMRERMKEKSVAPNIITFNSLLS 289

Query: 474 CLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEP 533
            L K   ++ A  L  EM   G +P+  TY+I+     +  +   A++LY      G   
Sbjct: 290 GLCKMRKMKEARSLLKEMEVNGFMPDGYTYSILFDGLLRCDDGNGAMELYEQATEKGIRI 349

Query: 534 DKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWY 593
           +  T SI++  L   G +++AE +  +      V DE +Y   V+ + + G++ KA    
Sbjct: 350 NNYTGSILLNGLCKQGKVEKAEEILKKFTENGLVADEVIYNTFVNGYCRIGDMNKAILTI 409

Query: 594 EAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
           E M   GLRPN  T NSL+  F  + ++  A   ++ M   G+ PS++TY  L+
Sbjct: 410 ERMESFGLRPNSITFNSLIDKFCDMKEMDKAEEWVKKMAEKGVTPSVETYNTLI 463



 Score =  136 bits (342), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 82/300 (27%), Positives = 149/300 (49%)

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
           + G + + +T + ++  L +  +     ++L +   +G   + V YN  ++ Y R   +N
Sbjct: 344 EKGIRINNYTGSILLNGLCKQGKVEKAEEILKKFTENGLVADEVIYNTFVNGYCRIGDMN 403

Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
           +A+   ++M+  G  P+ +T+ +LID       +D A +  KKM   G++P   TY+ +I
Sbjct: 404 KAILTIERMESFGLRPNSITFNSLIDKFCDMKEMDKAEEWVKKMAEKGVTPSVETYNTLI 463

Query: 473 NCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFE 532
           +  GK        Q+  +M   G  PN+V+Y  +I    K      A  + RDM   G  
Sbjct: 464 DGYGKLCTFDRCFQILEQMEEIGVKPNVVSYGSLINCLCKDGKILEAEIVLRDMICRGVL 523

Query: 533 PDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEW 592
           P+   Y+++++     G + +A   F EM R    P    Y +L+D   K G + +A ++
Sbjct: 524 PNAQVYNMLIDGSCMVGKVKDALRFFDEMMRSEISPTLVTYNVLIDGLCKKGKLTEAEDF 583

Query: 593 YEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTE 652
              +  +G  P+V T NSL+S +   G +S    L + M NLG+KP+++TY  L+S C++
Sbjct: 584 LTQITSSGHSPDVITYNSLISGYANAGNVSKCLGLYETMKNLGIKPTVRTYHPLISGCSK 643



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 89/395 (22%), Positives = 177/395 (44%), Gaps = 40/395 (10%)

Query: 318 LGNTNYSMDAY---QANQVLKQLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRAR 374
           + N+ +  D +   +A Q   +LQ+  + + F + +R++ G + +   Y  ++G L R +
Sbjct: 167 IENSGFRTDTFMYAKAIQAAVKLQNLKMGMEFLDSMRKR-GVRPNVFIYNVLIGGLCREK 225

Query: 375 QFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN---------------------- 412
           +     K+ D+M       ++VTYN LI  Y +   L+                      
Sbjct: 226 RIRDAEKMFDEMCNINLVGSIVTYNTLIDGYCKVGELDAAFKMRERMKEKSVAPNIITFN 285

Query: 413 -------------EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAA 459
                        EA  + K+M+V G  PD  TY  L D   +    + AM++Y++    
Sbjct: 286 SLLSGLCKMRKMKEARSLLKEMEVNGFMPDGYTYSILFDGLLRCDDGNGAMELYEQATEK 345

Query: 460 GLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSA 519
           G+  + +T S+++N L K G ++ A ++  +    G + + V YN  +    +  +   A
Sbjct: 346 GIRINNYTGSILLNGLCKQGKVEKAEEILKKFTENGLVADEVIYNTFVNGYCRIGDMNKA 405

Query: 520 LKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDL 579
           +     M++ G  P+ +T++ +++       +D+AE    +M  K   P    Y  L+D 
Sbjct: 406 ILTIERMESFGLRPNSITFNSLIDKFCDMKEMDKAEEWVKKMAEKGVTPSVETYNTLIDG 465

Query: 580 WGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPS 639
           +GK     + ++  E M + G++PNV +  SL++   + G++ +A  +L+ M+  G+ P+
Sbjct: 466 YGKLCTFDRCFQILEQMEEIGVKPNVVSYGSLINCLCKDGKILEAEIVLRDMICRGVLPN 525

Query: 640 LQTYTLLLS-CCTEARSPYDMGFCHELMAVSGHPA 673
            Q Y +L+   C   +    + F  E+M     P 
Sbjct: 526 AQVYNMLIDGSCMVGKVKDALRFFDEMMRSEISPT 560



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 82/263 (31%), Positives = 128/263 (48%), Gaps = 11/263 (4%)

Query: 364 TTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQV 423
           + MVG +  A +F       D+M+R    P +VTYN LI    +   L EA D   Q+  
Sbjct: 536 SCMVGKVKDALRF------FDEMMRSEISPTLVTYNVLIDGLCKKGKLTEAEDFLTQITS 589

Query: 424 VGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQA 483
            G  PD +TY +LI  +A AG +   + +Y+ M+  G+ P   TY  +I+   K G ++ 
Sbjct: 590 SGHSPDVITYNSLISGYANAGNVSKCLGLYETMKNLGIKPTVRTYHPLISGCSKEG-IEL 648

Query: 484 AHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVME 543
             +L+ EM+    +P+ V YN MI   A+  N Q A  L++ M + G  PDK+TY+ +  
Sbjct: 649 VEKLYNEMLQMNLLPDRVVYNAMIHCYAEIGNTQKAYSLHQGMLDQGIHPDKMTYNSL-- 706

Query: 544 VLGHC--GYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGL 601
           +LGH   G L   + +   M+ K   P    Y +LV       +   A+ WY  M++   
Sbjct: 707 ILGHFREGKLSNIKDLVNNMKAKELAPKADTYDILVKGHCDLKDFSGAYVWYREMVENNF 766

Query: 602 RPNVPTCNSLLSAFLRVGQLSDA 624
            PN   CN L +   + G+L + 
Sbjct: 767 LPNASICNELTAGLEQEGRLQEV 789



 Score = 75.9 bits (185), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 60/221 (27%), Positives = 104/221 (47%), Gaps = 1/221 (0%)

Query: 428 PDRVTYC-TLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQ 486
           P R+T    L+ +  K+  L  A+++Y+ M+  G  P   + S++ +CL           
Sbjct: 103 PLRITLSDMLLSVCCKSKMLREAVELYEFMRRDGKLPSLVSLSLLFSCLVNEKQFVKVVD 162

Query: 487 LFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLG 546
           LF E+ N G   +   Y   I    K +N +  ++    M+  G  P+   Y++++  L 
Sbjct: 163 LFMEIENSGFRTDTFMYAKAIQAAVKLQNLKMGMEFLDSMRKRGVRPNVFIYNVLIGGLC 222

Query: 547 HCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVP 606
               + +AE +F EM   N V     Y  L+D + K G +  A++  E M +  + PN+ 
Sbjct: 223 REKRIRDAEKMFDEMCNINLVGSIVTYNTLIDGYCKVGELDAAFKMRERMKEKSVAPNII 282

Query: 607 TCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
           T NSLLS   ++ ++ +A  LL+ M   G  P   TY++L 
Sbjct: 283 TFNSLLSGLCKMRKMKEARSLLKEMEVNGFMPDGYTYSILF 323



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 62/263 (23%), Positives = 105/263 (39%), Gaps = 35/263 (13%)

Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLI 402
           AL FF+ + R +       TY  ++  L +  +       L Q+   G  P+V+TYN LI
Sbjct: 545 ALRFFDEMMR-SEISPTLVTYNVLIDGLCKKGKLTEAEDFLTQITSSGHSPDVITYNSLI 603

Query: 403 HSYGRANYLNEALDVFKQMQ--------------VVGCE--------------------P 428
             Y  A  +++ L +++ M+              + GC                     P
Sbjct: 604 SGYANAGNVSKCLGLYETMKNLGIKPTVRTYHPLISGCSKEGIELVEKLYNEMLQMNLLP 663

Query: 429 DRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLF 488
           DRV Y  +I  +A+ G    A  +++ M   G+ PD  TY+ +I    + G L     L 
Sbjct: 664 DRVVYNAMIHCYAEIGNTQKAYSLHQGMLDQGIHPDKMTYNSLILGHFREGKLSNIKDLV 723

Query: 489 CEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHC 548
             M  +   P   TY+I++      +++  A   YR+M    F P+    + +   L   
Sbjct: 724 NNMKAKELAPKADTYDILVKGHCDLKDFSGAYVWYREMVENNFLPNASICNELTAGLEQE 783

Query: 549 GYLDEAEAVFAEMRRKNWVPDEP 571
           G L E + + +EM  K  +   P
Sbjct: 784 GRLQEVQVICSEMNVKGIINHWP 806



 Score = 57.0 bits (136), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 30/141 (21%), Positives = 67/141 (47%)

Query: 514 RNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVY 573
           + +   + L+ +++N+GF  D   Y+  ++       L         MR++   P+  +Y
Sbjct: 155 KQFVKVVDLFMEIENSGFRTDTFMYAKAIQAAVKLQNLKMGMEFLDSMRKRGVRPNVFIY 214

Query: 574 GLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLN 633
            +L+    +   +R A + ++ M    L  ++ T N+L+  + +VG+L  A+ + + M  
Sbjct: 215 NVLIGGLCREKRIRDAEKMFDEMCNINLVGSIVTYNTLIDGYCKVGELDAAFKMRERMKE 274

Query: 634 LGLKPSLQTYTLLLSCCTEAR 654
             + P++ T+  LLS   + R
Sbjct: 275 KSVAPNIITFNSLLSGLCKMR 295


>gi|224075802|ref|XP_002304774.1| predicted protein [Populus trichocarpa]
 gi|222842206|gb|EEE79753.1| predicted protein [Populus trichocarpa]
          Length = 728

 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 104/387 (26%), Positives = 180/387 (46%), Gaps = 9/387 (2%)

Query: 285 APFSRHFASTGNVVESVSRIL------RQWKWGPLAEEALGNTNYSMDAYQANQVLKQLQ 338
           +P SRH  +    +  ++R +       + +WGP     L           A +VLK   
Sbjct: 80  SPRSRHSLALSQRLSPIARFILDAFRKNRNQWGPEVVTELCKLRRVTPDLVA-EVLKVEN 138

Query: 339 DHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTY 398
           +  +A  FF+W  +Q GFKH   +Y      L R+  F A ++L + M   G  P    +
Sbjct: 139 NPQLATKFFHWAGKQKGFKHTFASYNAFAYNLNRSNFFRAADQLPELMEAQGKPPTEKQF 198

Query: 399 NRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQA 458
             LI  +  AN       V+++M   G +P    Y  ++D   K G LD+A+ +Y+  + 
Sbjct: 199 EILIRMHSDANRGLRVYYVYQKMVKFGVKPRVFLYNRIMDSLIKTGHLDLALSVYEDFRR 258

Query: 459 AGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQS 518
            GL  ++ TY ++I  L KAG ++   ++   M    C P++  Y  M+   A   N  +
Sbjct: 259 DGLVEESVTYMILIKGLCKAGRIEEMMEVLGRMRENLCKPDVFAYTAMVRALAGEGNLDA 318

Query: 519 ALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVD 578
            L+++ +M+  G EPD + Y  ++  L   G +D+   VF EM+ +  + D  +YG+LV+
Sbjct: 319 CLRVWEEMKRDGVEPDVMAYVTLVTALCKGGRVDKGYEVFKEMKGRRILIDRGIYGILVE 378

Query: 579 LWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKP 638
            +   G +  A +  + ++ +G R ++   NSL+  F  V ++  A+ L Q  +  GL+ 
Sbjct: 379 AFVADGKIGLACDLLKDLVDSGYRADLRIYNSLIEGFCNVKRVDKAHKLFQVTVQEGLER 438

Query: 639 SLQTYTLLLSCCTEARSPYDMGFCHEL 665
             +T   LL    E +   D  FC  L
Sbjct: 439 DFKTVNPLLMSYAEMKKMDD--FCKLL 463



 Score =  102 bits (254), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 74/311 (23%), Positives = 140/311 (45%), Gaps = 3/311 (0%)

Query: 342 VALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRL 401
           +AL  +   RR  G   +  TY  ++  L +A +   + ++L +M  + C+P+V  Y  +
Sbjct: 248 LALSVYEDFRRD-GLVEESVTYMILIKGLCKAGRIEEMMEVLGRMRENLCKPDVFAYTAM 306

Query: 402 IHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGL 461
           + +      L+  L V+++M+  G EPD + Y TL+    K G +D   +++K+M+   +
Sbjct: 307 VRALAGEGNLDACLRVWEEMKRDGVEPDVMAYVTLVTALCKGGRVDKGYEVFKEMKGRRI 366

Query: 462 SPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALK 521
             D   Y +++      G +  A  L  ++V+ G   +L  YN +I      +    A K
Sbjct: 367 LIDRGIYGILVEAFVADGKIGLACDLLKDLVDSGYRADLRIYNSLIEGFCNVKRVDKAHK 426

Query: 522 LYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWG 581
           L++     G E D  T + ++        +D+   +  +M +  +   + +      + G
Sbjct: 427 LFQVTVQEGLERDFKTVNPLLMSYAEMKKMDDFCKLLKQMEKLGFSVFDDLSKFFSYVVG 486

Query: 582 KAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQ 641
           K      A E +E +   G   +VP  N L+ A L +G++  A  L   M +L  KP   
Sbjct: 487 KPERTMMALEVFEDLKVKGY-SSVPIYNILMEALLTIGEMKRALSLFGEMKDLN-KPDST 544

Query: 642 TYTLLLSCCTE 652
           TY++ + C  E
Sbjct: 545 TYSIAIICFVE 555



 Score = 91.3 bits (225), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 72/310 (23%), Positives = 132/310 (42%), Gaps = 35/310 (11%)

Query: 357 KHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALD 416
           K D   YT MV  L       A  ++ ++M RDG +P+V+ Y  L+ +  +   +++  +
Sbjct: 297 KPDVFAYTAMVRALAGEGNLDACLRVWEEMKRDGVEPDVMAYVTLVTALCKGGRVDKGYE 356

Query: 417 VFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLG 476
           VFK+M+      DR  Y  L++     G + +A D+ K +  +G   D   Y+ +I    
Sbjct: 357 VFKEMKGRRILIDRGIYGILVEAFVADGKIGLACDLLKDLVDSGYRADLRIYNSLIEGFC 416

Query: 477 KAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF----- 531
               +  AH+LF   V +G   +  T N ++   A+ +      KL + M+  GF     
Sbjct: 417 NVKRVDKAHKLFQVTVQEGLERDFKTVNPLLMSYAEMKKMDDFCKLLKQMEKLGFSVFDD 476

Query: 532 ----------EPDKV-------------------TYSIVMEVLGHCGYLDEAEAVFAEMR 562
                     +P++                     Y+I+ME L   G +  A ++F EM+
Sbjct: 477 LSKFFSYVVGKPERTMMALEVFEDLKVKGYSSVPIYNILMEALLTIGEMKRALSLFGEMK 536

Query: 563 RKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLS 622
             N  PD   Y + +  + + GN+++A   +  +++    P+V    SL       G++ 
Sbjct: 537 DLNK-PDSTTYSIAIICFVEDGNIQEACVSHNKIVEMFCVPSVAAYCSLAKGLCDNGEID 595

Query: 623 DAYHLLQGML 632
            A  L++  L
Sbjct: 596 AAMMLVRDCL 605



 Score = 57.8 bits (138), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 57/272 (20%), Positives = 113/272 (41%), Gaps = 3/272 (1%)

Query: 354 AGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNE 413
           +G++ D   Y +++      ++    +KL    V++G + +  T N L+ SY     +++
Sbjct: 399 SGYRADLRIYNSLIEGFCNVKRVDKAHKLFQVTVQEGLERDFKTVNPLLMSYAEMKKMDD 458

Query: 414 ALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIIN 473
              + KQM+ +G             +  K     +A+++++ ++  G S     Y++++ 
Sbjct: 459 FCKLLKQMEKLGFSVFDDLSKFFSYVVGKPERTMMALEVFEDLKVKGYS-SVPIYNILME 517

Query: 474 CLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEP 533
            L   G ++ A  LF EM +    P+  TY+I I    +  N Q A   +  +      P
Sbjct: 518 ALLTIGEMKRALSLFGEMKDLN-KPDSTTYSIAIICFVEDGNIQEACVSHNKIVEMFCVP 576

Query: 534 DKVTYSIVMEVLGHCGYLDEAEAVFAE-MRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEW 592
               Y  + + L   G +D A  +  + +      P E  Y L +    K G   K  + 
Sbjct: 577 SVAAYCSLAKGLCDNGEIDAAMMLVRDCLASVESGPMEFKYSLTILHACKTGGAEKVIDV 636

Query: 593 YEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDA 624
              M+Q G  PN    ++++S   + G   +A
Sbjct: 637 LNEMMQEGCTPNEVIYSAIISGMCKHGTFEEA 668



 Score = 55.8 bits (133), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 38/143 (26%), Positives = 67/143 (46%), Gaps = 1/143 (0%)

Query: 387 VRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFL 446
           ++D  +P+  TY+  I  +     + EA     ++  + C P    YC+L       G +
Sbjct: 535 MKDLNKPDSTTYSIAIICFVEDGNIQEACVSHNKIVEMFCVPSVAAYCSLAKGLCDNGEI 594

Query: 447 DVAMDMYKKMQAAGLS-PDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNI 505
           D AM + +   A+  S P  F YS+ I    K G  +    +  EM+ +GC PN V Y+ 
Sbjct: 595 DAAMMLVRDCLASVESGPMEFKYSLTILHACKTGGAEKVIDVLNEMMQEGCTPNEVIYSA 654

Query: 506 MIALQAKARNYQSALKLYRDMQN 528
           +I+   K   ++ A K++ D++ 
Sbjct: 655 IISGMCKHGTFEEARKVFTDLRQ 677


>gi|255583688|ref|XP_002532598.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223527686|gb|EEF29795.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 553

 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 92/349 (26%), Positives = 174/349 (49%), Gaps = 6/349 (1%)

Query: 334 LKQLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQP 393
            KQL+   +      W+R Q+ +  +E     ++   G+   F A  K+L  M + G  P
Sbjct: 114 FKQLKKWHLVSQILEWVRTQSWWDFNEMDSLMLITAYGKQGNFSAAEKVLSYMNKMGYVP 173

Query: 394 NVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMY 453
           NVV++  L+ +YGR    N A  +F++MQ  G +P  VTY  ++    +      A +++
Sbjct: 174 NVVSHTALMEAYGRGARYNNAEAIFRRMQSSGPKPSAVTYQIILKNFVEGNKFKEAEEVF 233

Query: 454 KKM---QAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQ 510
           + +   + + L PD   + ++I    KAG+ + A Q+F  M  +G   + VTYN +++ +
Sbjct: 234 ETLLDEEKSPLKPDQKMFHMMIYMHRKAGNYEKARQIFALMTQRGVPKSTVTYNSLMSFE 293

Query: 511 AKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDE 570
               NY+   K+Y  MQ +G +PD ++Y++++   G     DEA AVF EM      P  
Sbjct: 294 T---NYKEVSKIYDQMQRSGLQPDVISYALLINAYGKARREDEALAVFEEMLDAGVRPTH 350

Query: 571 PVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQG 630
             Y +L+D +  +G V +A   +++M +    P++ +  ++LSA++    ++ A +    
Sbjct: 351 KAYNILLDAFAISGMVEQARTVFKSMRRDRYTPDLCSYTTMLSAYVNASDMAGAENFFNR 410

Query: 631 MLNLGLKPSLQTYTLLLSCCTEARSPYDMGFCHELMAVSGHPAHMFLLS 679
           +   GL+P++ TY  L+    +  +   M   +E M + G  A+  + +
Sbjct: 411 LKQDGLEPNVVTYGALIKGYAKTNNLDKMMEKYEEMQLRGVKANQTIFT 459



 Score =  118 bits (295), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 67/240 (27%), Positives = 117/240 (48%), Gaps = 3/240 (1%)

Query: 350 LRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRAN 409
           L  Q G      TY +++        +  ++K+ DQM R G QP+V++Y  LI++YG+A 
Sbjct: 273 LMTQRGVPKSTVTYNSLMSF---ETNYKEVSKIYDQMQRSGLQPDVISYALLINAYGKAR 329

Query: 410 YLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYS 469
             +EAL VF++M   G  P    Y  L+D  A +G ++ A  ++K M+    +PD  +Y+
Sbjct: 330 REDEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQARTVFKSMRRDRYTPDLCSYT 389

Query: 470 VIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNA 529
            +++    A  +  A   F  +   G  PN+VTY  +I   AK  N    ++ Y +MQ  
Sbjct: 390 TMLSAYVNASDMAGAENFFNRLKQDGLEPNVVTYGALIKGYAKTNNLDKMMEKYEEMQLR 449

Query: 530 GFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKA 589
           G + ++  ++ +M+  G       A   + EM +    PD+    +L+ L   A   ++A
Sbjct: 450 GVKANQTIFTTIMDAYGKNKDFGSAVIWYKEMEQYGVPPDQKAKNILLSLAKTADEQKEA 509



 Score =  113 bits (283), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 66/258 (25%), Positives = 126/258 (48%), Gaps = 3/258 (1%)

Query: 356 FKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEAL 415
            K D+  +  M+ +  +A  +    ++   M + G   + VTYN L+      NY  E  
Sbjct: 244 LKPDQKMFHMMIYMHRKAGNYEKARQIFALMTQRGVPKSTVTYNSLMSF--ETNY-KEVS 300

Query: 416 DVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCL 475
            ++ QMQ  G +PD ++Y  LI+ + KA   D A+ ++++M  AG+ P    Y+++++  
Sbjct: 301 KIYDQMQRSGLQPDVISYALLINAYGKARREDEALAVFEEMLDAGVRPTHKAYNILLDAF 360

Query: 476 GKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDK 535
             +G ++ A  +F  M      P+L +Y  M++    A +   A   +  ++  G EP+ 
Sbjct: 361 AISGMVEQARTVFKSMRRDRYTPDLCSYTTMLSAYVNASDMAGAENFFNRLKQDGLEPNV 420

Query: 536 VTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEA 595
           VTY  +++       LD+    + EM+ +    ++ ++  ++D +GK  +   A  WY+ 
Sbjct: 421 VTYGALIKGYAKTNNLDKMMEKYEEMQLRGVKANQTIFTTIMDAYGKNKDFGSAVIWYKE 480

Query: 596 MLQAGLRPNVPTCNSLLS 613
           M Q G+ P+    N LLS
Sbjct: 481 MEQYGVPPDQKAKNILLS 498



 Score = 77.0 bits (188), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 43/166 (25%), Positives = 86/166 (51%), Gaps = 7/166 (4%)

Query: 322 NYSMDAYQANQVLKQLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINK 381
           N  +DA+  + +++Q      A   F  +RR   +  D  +YTTM+     A        
Sbjct: 354 NILLDAFAISGMVEQ------ARTVFKSMRRDR-YTPDLCSYTTMLSAYVNASDMAGAEN 406

Query: 382 LLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHA 441
             +++ +DG +PNVVTY  LI  Y + N L++ ++ +++MQ+ G + ++  + T++D + 
Sbjct: 407 FFNRLKQDGLEPNVVTYGALIKGYAKTNNLDKMMEKYEEMQLRGVKANQTIFTTIMDAYG 466

Query: 442 KAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQL 487
           K      A+  YK+M+  G+ PD    +++++    A   + A+Q+
Sbjct: 467 KNKDFGSAVIWYKEMEQYGVPPDQKAKNILLSLAKTADEQKEANQM 512


>gi|357161570|ref|XP_003579133.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39710-like [Brachypodium distachyon]
          Length = 721

 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 103/360 (28%), Positives = 171/360 (47%), Gaps = 4/360 (1%)

Query: 293 STGNVVESVSRILRQW-KWGPLAEEALGNTNYSMDAYQANQVLK-QLQ-DHTVALGFFNW 349
           S   +V    R+L Q   W P  E  L +    +   Q   VL+ Q Q D   A  FF W
Sbjct: 56  SRSRLVRDTCRLLEQRGSWTPKLEAQLRHLLRVLSPPQVRAVLRAQAQGDARAAFEFFRW 115

Query: 350 LRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRAN 409
             RQ  ++H    +  M+G+L R R      +++  M+R G +     +  L+ SY RA 
Sbjct: 116 ADRQWQYRHAPEVFDEMLGLLSRTRLHDPARRVVRLMIRRGVRRGPRQFAHLMLSYSRAG 175

Query: 410 YLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYS 469
            L  A+ V + MQ  GC PD       +++   AG +D A+    +M+  G+ PD  TY+
Sbjct: 176 KLRSAMRVLQLMQTDGCAPDISICNVAVNVLVVAGRVDKALGFADRMRRVGVEPDVVTYN 235

Query: 470 VIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQN- 528
            +I  L     +  A ++   M+  GC P+ ++Y  +++   K +       L   M+N 
Sbjct: 236 CLIKGLCSVRRVVEALEMIGVMLKNGCPPDKISYYTVMSFLCKEKRVSEVRSLLATMRND 295

Query: 529 AGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRK 588
           AG   D+VTY++++ VL   G+ DEA     E   K +  DE  Y  +V  +   G + +
Sbjct: 296 AGLLTDQVTYNMLIHVLAKHGHADEALEFLRESEGKRFRVDEVGYSAVVHSFCLNGRMAE 355

Query: 589 AWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
           A E    M+     P+V T ++++  F R+G++  A  +++ M   G KP++ T+T LL+
Sbjct: 356 AKEIVGEMISKECHPDVVTYSAVVDGFCRIGEIDQARKMMKHMYKNGCKPNIVTHTALLN 415



 Score =  112 bits (280), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 76/309 (24%), Positives = 142/309 (45%), Gaps = 2/309 (0%)

Query: 326 DAYQANQVLKQLQDHTVALGFFNWLRRQAG--FKHDEHTYTTMVGILGRARQFGAINKLL 383
           D    N ++  L  H  A     +LR   G  F+ DE  Y+ +V       +     +++
Sbjct: 301 DQVTYNMLIHVLAKHGHADEALEFLRESEGKRFRVDEVGYSAVVHSFCLNGRMAEAKEIV 360

Query: 384 DQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKA 443
            +M+   C P+VVTY+ ++  + R   +++A  + K M   GC+P+ VT+  L++   K 
Sbjct: 361 GEMISKECHPDVVTYSAVVDGFCRIGEIDQARKMMKHMYKNGCKPNIVTHTALLNGLCKV 420

Query: 444 GFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTY 503
           G    A ++  K      +P   TYSV+++   + G L+ +  +  +M+ +G  P  V  
Sbjct: 421 GKSSEAWELLNKSGEDWWTPSDITYSVVMHGFRREGKLKESCDVVAQMLQKGFFPTTVEI 480

Query: 504 NIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRR 563
           N++I    K      A +     Q+ G   + V ++ V+      G L+ A ++  ++  
Sbjct: 481 NLLIHALCKEGKPAEAKEFMEQCQSKGCTINVVNFTTVIHGFSRQGDLESALSLLDDLYL 540

Query: 564 KNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSD 623
            N  PD   Y ++V+  G+ G +++A    E ML  GL P + T  +++  +   G + +
Sbjct: 541 SNRHPDVVTYTVVVNALGRKGRLKEATGLVEKMLNRGLVPTLVTYRTVIHRYCEKGTVEE 600

Query: 624 AYHLLQGML 632
              LL  ML
Sbjct: 601 LVDLLDKML 609



 Score =  110 bits (274), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 94/386 (24%), Positives = 165/386 (42%), Gaps = 23/386 (5%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRD-GCQPNVVTYNRLIHSYGRANYLNE 413
           G   D+ +Y T++  L + ++   +  LL  M  D G   + VTYN LIH   +  + +E
Sbjct: 261 GCPPDKISYYTVMSFLCKEKRVSEVRSLLATMRNDAGLLTDQVTYNMLIHVLAKHGHADE 320

Query: 414 ALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIIN 473
           AL+  ++ +      D V Y  ++      G +  A ++  +M +    PD  TYS +++
Sbjct: 321 ALEFLRESEGKRFRVDEVGYSAVVHSFCLNGRMAEAKEIVGEMISKECHPDVVTYSAVVD 380

Query: 474 CLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEP 533
              + G +  A ++   M   GC PN+VT+  ++    K      A +L        + P
Sbjct: 381 GFCRIGEIDQARKMMKHMYKNGCKPNIVTHTALLNGLCKVGKSSEAWELLNKSGEDWWTP 440

Query: 534 DKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWY 593
             +TYS+VM      G L E+  V A+M +K + P      LL+    K G   +A E+ 
Sbjct: 441 SDITYSVVMHGFRREGKLKESCDVVAQMLQKGFFPTTVEINLLIHALCKEGKPAEAKEFM 500

Query: 594 EAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEA 653
           E     G   NV    +++  F R G L  A  LL  +      P + TYT++++     
Sbjct: 501 EQCQSKGCTINVVNFTTVIHGFSRQGDLESALSLLDDLYLSNRHPDVVTYTVVVNA---- 556

Query: 654 RSPYDMGFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRESKRGLV 713
                +G    L   +G    M            + +   + ++  ++H   R  ++G V
Sbjct: 557 -----LGRKGRLKEATGLVEKML----------NRGLVPTLVTYRTVIH---RYCEKGTV 598

Query: 714 DAVVDFLHKSGLKEEAGSVWEVAAQK 739
           + +VD L K   ++E  SV+    +K
Sbjct: 599 EELVDLLDKMLARQELKSVYNQVIEK 624



 Score = 99.0 bits (245), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 70/294 (23%), Positives = 136/294 (46%)

Query: 350 LRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRAN 409
           +R  AG   D+ TY  ++ +L +        + L +      + + V Y+ ++HS+    
Sbjct: 292 MRNDAGLLTDQVTYNMLIHVLAKHGHADEALEFLRESEGKRFRVDEVGYSAVVHSFCLNG 351

Query: 410 YLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYS 469
            + EA ++  +M    C PD VTY  ++D   + G +D A  M K M   G  P+  T++
Sbjct: 352 RMAEAKEIVGEMISKECHPDVVTYSAVVDGFCRIGEIDQARKMMKHMYKNGCKPNIVTHT 411

Query: 470 VIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNA 529
            ++N L K G    A +L  +       P+ +TY++++    +    + +  +   M   
Sbjct: 412 ALLNGLCKVGKSSEAWELLNKSGEDWWTPSDITYSVVMHGFRREGKLKESCDVVAQMLQK 471

Query: 530 GFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKA 589
           GF P  V  ++++  L   G   EA+    + + K    +   +  ++  + + G++  A
Sbjct: 472 GFFPTTVEINLLIHALCKEGKPAEAKEFMEQCQSKGCTINVVNFTTVIHGFSRQGDLESA 531

Query: 590 WEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTY 643
               + +  +   P+V T   +++A  R G+L +A  L++ MLN GL P+L TY
Sbjct: 532 LSLLDDLYLSNRHPDVVTYTVVVNALGRKGRLKEATGLVEKMLNRGLVPTLVTY 585



 Score = 46.2 bits (108), Expect = 0.068,   Method: Compositional matrix adjust.
 Identities = 32/116 (27%), Positives = 57/116 (49%), Gaps = 2/116 (1%)

Query: 392 QPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMD 451
            P+VVTY  ++++ GR   L EA  + ++M   G  P  VTY T+I  + + G ++  +D
Sbjct: 544 HPDVVTYTVVVNALGRKGRLKEATGLVEKMLNRGLVPTLVTYRTVIHRYCEKGTVEELVD 603

Query: 452 MYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMI 507
           +  KM A         Y+ +I  L   G L  A+ L  +++      +  T +I++
Sbjct: 604 LLDKMLAR--QELKSVYNQVIEKLCAFGKLNEAYGLLSKVLRTASQRDAQTCHILM 657


>gi|357130059|ref|XP_003566674.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
           distachyon]
          Length = 833

 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 123/491 (25%), Positives = 213/491 (43%), Gaps = 52/491 (10%)

Query: 321 TNYSMDAYQANQVLKQLQDHTVALGFFNWLRR---QAGFKHDEHTYTTMVGILGRARQFG 377
           T   MD   A+ +LK L     +    N L     + G + D  +Y T+V  L    +  
Sbjct: 148 TGLKMDVIVASILLKCLYHAKRSDDVVNLLLHRMPELGVEPDTISYNTVVKTLCEDSRSQ 207

Query: 378 AINKLLDQMVRD--GCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCT 435
               LL  MV+   GC PNVVTYN +IH   R   +++A ++F +M   G  PD VTY +
Sbjct: 208 RALDLLHTMVKKSGGCSPNVVTYNTVIHGLFREGEVSKACNLFHEMMQQGVVPDVVTYTS 267

Query: 436 LIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQG 495
           +ID   KA  +D A  + ++M + G  P+  TY+ +I+    +G  +    +F EM +QG
Sbjct: 268 IIDALCKARAMDKAELVLRQMISNGFQPNKVTYNCMIHGYSISGQWKETAGMFREMTSQG 327

Query: 496 CIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAE 555
            +PN+VT N  ++   K    + A + +  M   G +P+ VTYS+++      G   +  
Sbjct: 328 LMPNIVTCNSYMSSLCKHGKSKEAAEFFDSMAAKGHKPNLVTYSVLLHGYATEGCFVDML 387

Query: 556 AVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAF 615
            +F  M     V D+ V+ +++D +GK G + +    +  M + G+ P+  T   +++AF
Sbjct: 388 NLFNSMEGNGIVADQRVFNIVIDAYGKRGMMDETMLIFTQMQEQGVIPDACTYGIVIAAF 447

Query: 616 LRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGFCHELMAVSGHPAHM 675
            R+G+L+DA      M+ +GLKP    Y  L+            GFC     V       
Sbjct: 448 SRMGRLADAMDKFNQMIAMGLKPEGIVYHSLIQ-----------GFCMHGNLVKAKELVS 496

Query: 676 FLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRESKRGLVDAVVDFLHKSGLKEEAGSVWEV 735
            ++S   P P+                           +++++ L K G   EA  +++ 
Sbjct: 497 EMMSRGIPRPNIV-----------------------FFNSIINSLCKEGRVVEAHDIFDF 533

Query: 736 AAQKNVYPDAVKEKGMSYWLINLHVMSDGTAVIALSRTLAWFRKQMLISGVGPSRID--- 792
                  PD          +I  + + DG  ++            M+ +G+ P  +    
Sbjct: 534 VIHIGERPD----------VITFNSLIDGYGLVGKIEKAFGVLDAMISAGIEPDVVSYNT 583

Query: 793 IVTGWGRRSRV 803
           ++ G+ R  R+
Sbjct: 584 LIDGYCRNGRI 594



 Score =  153 bits (386), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 113/454 (24%), Positives = 208/454 (45%), Gaps = 20/454 (4%)

Query: 381 KLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIH 440
           +  D M   G +PN+VTY+ L+H Y       + L++F  M+  G   D+  +  +ID +
Sbjct: 353 EFFDSMAAKGHKPNLVTYSVLLHGYATEGCFVDMLNLFNSMEGNGIVADQRVFNIVIDAY 412

Query: 441 AKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNL 500
            K G +D  M ++ +MQ  G+ PD  TY ++I    + G L  A   F +M+  G  P  
Sbjct: 413 GKRGMMDETMLIFTQMQEQGVIPDACTYGIVIAAFSRMGRLADAMDKFNQMIAMGLKPEG 472

Query: 501 VTYNIMIALQAKARNYQSALKLYRDMQNAGF-EPDKVTYSIVMEVLGHCGYLDEAEAVFA 559
           + Y+ +I       N   A +L  +M + G   P+ V ++ ++  L   G + EA  +F 
Sbjct: 473 IVYHSLIQGFCMHGNLVKAKELVSEMMSRGIPRPNIVFFNSIINSLCKEGRVVEAHDIFD 532

Query: 560 EMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVG 619
            +      PD   +  L+D +G  G + KA+   +AM+ AG+ P+V + N+L+  + R G
Sbjct: 533 FVIHIGERPDVITFNSLIDGYGLVGKIEKAFGVLDAMISAGIEPDVVSYNTLIDGYCRNG 592

Query: 620 QLSDAYHLLQGMLNLGLKPSLQTYTLLL-SCCTEARSPYDMGFCHELMAVSGHPAHMFLL 678
           ++ D   L   ML+ G+KP+  TY ++L     + R+      CHE++  SG    +   
Sbjct: 593 RIDDGLILFGEMLSKGVKPTTITYGIILHGLFNDGRTVGAKKMCHEMIE-SGTTMDISTC 651

Query: 679 SMPSPGPDGQNVRDHVGSFLEMMHSEDRESKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQ 738
            +   G    N  D   +  + + + + +    +++ ++D ++K   +EEA  +++  + 
Sbjct: 652 GIILGGLCRNNCDDEAIAMFKKLGAMNVKFNIAIINTMIDAMYKVRKREEAKELFDSISA 711

Query: 739 KNVYPDAVKEKGMSYWLI---------NLHVMSDGTAVIALSRTLAWFRKQMLISGVGPS 789
             + P+A     M   L+         N+  + + +     SR L +  + +L  G    
Sbjct: 712 TGLVPNASTYGVMIKNLLKEGSVEEADNMFSLMEKSGCAPSSRLLNYIIRVLLEKG---- 767

Query: 790 RIDIVTGWGRRSRVTG--TSLVRQAVQELLHMFS 821
             +IV       +V G   SL    V  L+ +FS
Sbjct: 768 --EIVKAGNYMFKVDGKRISLEASTVSLLMALFS 799



 Score = 94.7 bits (234), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 91/368 (24%), Positives = 154/368 (41%), Gaps = 32/368 (8%)

Query: 388 RDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLD 447
           RDG    V  +NR+     R      AL            P   TY  L+D   +     
Sbjct: 92  RDGPSLAVALFNRICREEARPRV---AL------------PTVCTYNILMDCCCRTRRPT 136

Query: 448 VAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQ-AAHQLFCEMVNQGCIPNLVTYNIM 506
           V   ++ +    GL  D    S+++ CL  A       + L   M   G  P+ ++YN +
Sbjct: 137 VGFALFGRFLKTGLKMDVIVASILLKCLYHAKRSDDVVNLLLHRMPELGVEPDTISYNTV 196

Query: 507 IALQAKARNYQSALKLYRDM--QNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRK 564
           +    +    Q AL L   M  ++ G  P+ VTY+ V+  L   G + +A  +F EM ++
Sbjct: 197 VKTLCEDSRSQRALDLLHTMVKKSGGCSPNVVTYNTVIHGLFREGEVSKACNLFHEMMQQ 256

Query: 565 NWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDA 624
             VPD   Y  ++D   KA  + KA      M+  G +PN  T N ++  +   GQ  + 
Sbjct: 257 GVVPDVVTYTSIIDALCKARAMDKAELVLRQMISNGFQPNKVTYNCMIHGYSISGQWKET 316

Query: 625 YHLLQGMLNLGLKPSLQTY-TLLLSCCTEARSPYDMGFCHELMAVSGHPAHMFLLSMPSP 683
             + + M + GL P++ T  + + S C   +S     F  + MA  GH  ++   S+   
Sbjct: 317 AGMFREMTSQGLMPNIVTCNSYMSSLCKHGKSKEAAEF-FDSMAAKGHKPNLVTYSVLLH 375

Query: 684 GPDGQNVRDHVGSFLEMMHSEDRESKRGLV------DAVVDFLHKSGLKEEAGSVWEVAA 737
           G   +      G F++M++  +     G+V      + V+D   K G+ +E   ++    
Sbjct: 376 GYATE------GCFVDMLNLFNSMEGNGIVADQRVFNIVIDAYGKRGMMDETMLIFTQMQ 429

Query: 738 QKNVYPDA 745
           ++ V PDA
Sbjct: 430 EQGVIPDA 437



 Score = 88.2 bits (217), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 67/278 (24%), Positives = 129/278 (46%), Gaps = 8/278 (2%)

Query: 355 GFKHDEHTYTTMV---GILGRARQ-FGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANY 410
           G + D  T+ +++   G++G+  + FG    +LD M+  G +P+VV+YN LI  Y R   
Sbjct: 538 GERPDVITFNSLIDGYGLVGKIEKAFG----VLDAMISAGIEPDVVSYNTLIDGYCRNGR 593

Query: 411 LNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSV 470
           +++ L +F +M   G +P  +TY  ++      G    A  M  +M  +G + D  T  +
Sbjct: 594 IDDGLILFGEMLSKGVKPTTITYGIILHGLFNDGRTVGAKKMCHEMIESGTTMDISTCGI 653

Query: 471 IINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAG 530
           I+  L +      A  +F ++       N+   N MI    K R  + A +L+  +   G
Sbjct: 654 ILGGLCRNNCDDEAIAMFKKLGAMNVKFNIAIINTMIDAMYKVRKREEAKELFDSISATG 713

Query: 531 FEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAW 590
             P+  TY ++++ L   G ++EA+ +F+ M +    P   +   ++ +  + G + KA 
Sbjct: 714 LVPNASTYGVMIKNLLKEGSVEEADNMFSLMEKSGCAPSSRLLNYIIRVLLEKGEIVKAG 773

Query: 591 EWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLL 628
            +   +    +     T + L++ F R G+  +   LL
Sbjct: 774 NYMFKVDGKRISLEASTVSLLMALFSREGKYWEDVKLL 811



 Score = 65.9 bits (159), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 72/338 (21%), Positives = 130/338 (38%), Gaps = 42/338 (12%)

Query: 497 IPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDE-AE 555
           +P + TYNI++    + R       L+      G + D +  SI+++ L H    D+   
Sbjct: 116 LPTVCTYNILMDCCCRTRRPTVGFALFGRFLKTGLKMDVIVASILLKCLYHAKRSDDVVN 175

Query: 556 AVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQ--AGLRPNVPTCNSLLS 613
            +   M      PD   Y  +V    +    ++A +    M++   G  PNV T N+++ 
Sbjct: 176 LLLHRMPELGVEPDTISYNTVVKTLCEDSRSQRALDLLHTMVKKSGGCSPNVVTYNTVIH 235

Query: 614 AFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGFCHELMAVSG-HP 672
              R G++S A +L   M+  G+ P + TYT ++    +AR+          M  +G  P
Sbjct: 236 GLFREGEVSKACNLFHEMMQQGVVPDVVTYTSIIDALCKARAMDKAELVLRQMISNGFQP 295

Query: 673 AHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRESKRGLVDAVVDF------LHKSGLK 726
             +    M          ++  G F EM       + +GL+  +V        L K G  
Sbjct: 296 NKVTYNCMIHGYSISGQWKETAGMFREM-------TSQGLMPNIVTCNSYMSSLCKHGKS 348

Query: 727 EEAGSVWEVAAQKNVYPDAVK---------EKGMSYWLINLHVMSDGTAVIALSRTLAWF 777
           +EA   ++  A K   P+ V           +G    ++NL    +G  ++A  R     
Sbjct: 349 KEAAEFFDSMAAKGHKPNLVTYSVLLHGYATEGCFVDMLNLFNSMEGNGIVADQRVFNI- 407

Query: 778 RKQMLISGVGPSRIDIVTGWGRRSRVTGTSLVRQAVQE 815
                          ++  +G+R  +  T L+   +QE
Sbjct: 408 ---------------VIDAYGKRGMMDETMLIFTQMQE 430


>gi|255660804|gb|ACU25571.1| pentatricopeptide repeat-containing protein [Glandularia araucana]
          Length = 418

 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 89/299 (29%), Positives = 162/299 (54%)

Query: 350 LRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRAN 409
           L ++  F+    T   ++  L + + F  +    ++ +  G   ++  +N L+HS+ +  
Sbjct: 91  LTKEHKFRVPFDTXRKVIEHLMKLKYFKLVWGFYEESLEYGYPASLYFFNILMHSFVKEG 150

Query: 410 YLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYS 469
            +  A  VF  +   G  P  V++ TL++ + K G LD    +   MQA+G+ PD +TYS
Sbjct: 151 EIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQASGVQPDVYTYS 210

Query: 470 VIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNA 529
           V+IN L K   ++ A++LF EM+N G +PN VT+  +I    K      A+++Y+ M + 
Sbjct: 211 VLINGLCKESKMEDANELFDEMLNNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQ 270

Query: 530 GFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKA 589
              PD +TY+ ++  L   G L +A+ +  EM  K   PD+  Y  L+D   K G++  A
Sbjct: 271 SLSPDLITYNTLIYGLCKKGDLKQAQDLTDEMSMKGLKPDKITYTTLIDGSCKEGHLETA 330

Query: 590 WEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
           +E+ + M++  +R +     +L+S   + G+  DA  +L+ ML++GLKP + TYT++++
Sbjct: 331 FEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIIN 389



 Score =  122 bits (305), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 75/263 (28%), Positives = 136/263 (51%), Gaps = 4/263 (1%)

Query: 382 LLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHA 441
           + D + + G +P+VV++N L++ Y +   L+E   +   MQ  G +PD  TY  LI+   
Sbjct: 158 VFDAITKWGLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLC 217

Query: 442 KAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLV 501
           K   ++ A +++ +M   GL P+  T++ +I+   K G +  A +++ +M++Q   P+L+
Sbjct: 218 KESKMEDANELFDEMLNNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLI 277

Query: 502 TYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHC--GYLDEAEAVFA 559
           TYN +I    K  + + A  L  +M   G +PDK+TY+ +++  G C  G+L+ A     
Sbjct: 278 TYNTLIYGLCKKGDLKQAQDLTDEMSMKGLKPDKITYTTLID--GSCKEGHLETAFEYRK 335

Query: 560 EMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVG 619
            M ++N   D+  Y  L+    + G    A +    ML  GL+P + T   +++ F + G
Sbjct: 336 RMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKG 395

Query: 620 QLSDAYHLLQGMLNLGLKPSLQT 642
            +     LL+ M   G  PS+ T
Sbjct: 396 DVWTGSKLLKEMQRDGYVPSVVT 418



 Score =  118 bits (295), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 72/227 (31%), Positives = 120/227 (52%)

Query: 381 KLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIH 440
           +L + M   G QP+V TY+ LI+   + + + +A ++F +M   G  P+ VT+ TLID H
Sbjct: 192 RLKNAMQASGVQPDVYTYSVLINGLCKESKMEDANELFDEMLNNGLVPNGVTFTTLIDGH 251

Query: 441 AKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNL 500
            K G +D+AM++YK+M +  LSPD  TY+ +I  L K G L+ A  L  EM  +G  P+ 
Sbjct: 252 CKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLTDEMSMKGLKPDK 311

Query: 501 VTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAE 560
           +TY  +I    K  + ++A +  + M       D V Y+ ++  L   G   +AE +  E
Sbjct: 312 ITYTTLIDGSCKEGHLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLRE 371

Query: 561 MRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPT 607
           M      P+   Y ++++ + K G+V    +  + M + G  P+V T
Sbjct: 372 MLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYVPSVVT 418



 Score =  112 bits (280), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 82/303 (27%), Positives = 143/303 (47%), Gaps = 16/303 (5%)

Query: 271 FSKPSREMKIPAGLAPFS---RHFASTGNV--VESVSRILRQWKWGPLAEEALGNTNYSM 325
           F + S E   PA L  F+     F   G +   +SV   + +W   P    ++ + N  M
Sbjct: 123 FYEESLEYGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRP----SVVSFNTLM 178

Query: 326 DAYQANQVLKQLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQ 385
           + Y       +L D        N ++  +G + D +TY+ ++  L +  +    N+L D+
Sbjct: 179 NGYI------KLGDLDEGFRLKNAMQ-ASGVQPDVYTYSVLINGLCKESKMEDANELFDE 231

Query: 386 MVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGF 445
           M+ +G  PN VT+  LI  + +   ++ A++++KQM      PD +TY TLI    K G 
Sbjct: 232 MLNNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGD 291

Query: 446 LDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNI 505
           L  A D+  +M   GL PD  TY+ +I+   K GHL+ A +    M+ +    + V Y  
Sbjct: 292 LKQAQDLTDEMSMKGLKPDKITYTTLIDGSCKEGHLETAFEYRKRMIKENIRLDDVAYTA 351

Query: 506 MIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKN 565
           +I+   +      A K+ R+M + G +P+  TY++++      G +     +  EM+R  
Sbjct: 352 LISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDG 411

Query: 566 WVP 568
           +VP
Sbjct: 412 YVP 414



 Score = 58.5 bits (140), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 36/159 (22%), Positives = 79/159 (49%), Gaps = 1/159 (0%)

Query: 497 IPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEA 556
           I ++  ++ +I    ++   + A++ YR  +   F     T   V+E L    Y      
Sbjct: 63  ISDIYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTXRKVIEHLMKLKYFKLVWG 122

Query: 557 VFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFL 616
            + E     +      + +L+  + K G +R A   ++A+ + GLRP+V + N+L++ ++
Sbjct: 123 FYEESLEYGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYI 182

Query: 617 RVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS-CCTEAR 654
           ++G L + + L   M   G++P + TY++L++  C E++
Sbjct: 183 KLGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESK 221


>gi|334184699|ref|NP_001189682.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|330253975|gb|AEC09069.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 613

 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 92/355 (25%), Positives = 179/355 (50%), Gaps = 4/355 (1%)

Query: 297 VVESVSRILRQWKWGPLAEEALGNTNYSMDAYQANQVLKQLQDHTVALGFFNWLRRQAGF 356
           ++E    +L + +   ++ + +G T Y  +AY    ++K+  +   A+  F  ++R    
Sbjct: 227 LIERAEVVLVEMQNHHVSPKTIGVTVY--NAY-IEGLMKRKGNTEEAIDVFQRMKRDRC- 282

Query: 357 KHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALD 416
           K    TY  M+ + G+A +     KL  +M    C+PN+ TY  L++++ R     +A +
Sbjct: 283 KPTTETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEE 342

Query: 417 VFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLG 476
           +F+Q+Q  G EPD   Y  L++ +++AG+   A +++  MQ  G  PD  +Y+++++  G
Sbjct: 343 IFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYG 402

Query: 477 KAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKV 536
           +AG    A  +F EM   G  P + ++ ++++  +KAR+      + ++M   G EPD  
Sbjct: 403 RAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTF 462

Query: 537 TYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAM 596
             + ++ + G  G   + E + AEM       D   Y +L++++GKAG + +  E +  +
Sbjct: 463 VLNSMLNLYGRLGQFTKMEKILAEMENGPCTADISTYNILINIYGKAGFLERIEELFVEL 522

Query: 597 LQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCT 651
            +   RP+V T  S + A+ R         + + M++ G  P   T  +LLS C+
Sbjct: 523 KEKNFRPDVVTWTSRIGAYSRKKLYVKCLEVFEEMIDSGCAPDGGTAKVLLSACS 577



 Score =  140 bits (353), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 76/270 (28%), Positives = 135/270 (50%)

Query: 362 TYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQM 421
           TYT +V    R        ++ +Q+  DG +P+V  YN L+ SY RA Y   A ++F  M
Sbjct: 323 TYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLM 382

Query: 422 QVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHL 481
           Q +GCEPDR +Y  ++D + +AG    A  ++++M+  G++P   ++ ++++   KA  +
Sbjct: 383 QHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDV 442

Query: 482 QAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIV 541
                +  EM   G  P+    N M+ L  +   +    K+  +M+N     D  TY+I+
Sbjct: 443 TKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTADISTYNIL 502

Query: 542 MEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGL 601
           + + G  G+L+  E +F E++ KN+ PD   +   +  + +     K  E +E M+ +G 
Sbjct: 503 INIYGKAGFLERIEELFVELKEKNFRPDVVTWTSRIGAYSRKKLYVKCLEVFEEMIDSGC 562

Query: 602 RPNVPTCNSLLSAFLRVGQLSDAYHLLQGM 631
            P+  T   LLSA     Q+     +L+ M
Sbjct: 563 APDGGTAKVLLSACSSEEQVEQVTSVLRTM 592



 Score =  132 bits (333), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 99/368 (26%), Positives = 174/368 (47%), Gaps = 22/368 (5%)

Query: 392 QPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMD 451
           QP+V+ +N LI +YG+     EA  ++ Q+      P   TY  LI  +  AG ++ A  
Sbjct: 174 QPDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAYCMAGLIERAEV 233

Query: 452 MYKKMQAAGLSPDTFTYSV----IINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMI 507
           +  +MQ   +SP T   +V    I   + + G+ + A  +F  M    C P   TYN+MI
Sbjct: 234 VLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTTETYNLMI 293

Query: 508 ALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWV 567
            L  KA     + KLY +M++   +P+  TY+ ++      G  ++AE +F +++     
Sbjct: 294 NLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGLE 353

Query: 568 PDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHL 627
           PD  VY  L++ + +AG    A E +  M   G  P+  + N ++ A+ R G  SDA  +
Sbjct: 354 PDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAV 413

Query: 628 LQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGFCHEL---MAVSGHPAHMFLLSMPSPG 684
            + M  LG+ P+++++ LLLS  ++AR   D+  C  +   M+ +G     F+L+     
Sbjct: 414 FEEMKRLGIAPTMKSHMLLLSAYSKAR---DVTKCEAIVKEMSENGVEPDTFVLN----- 465

Query: 685 PDGQNVRDHVGSFLEM------MHSEDRESKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQ 738
               N+   +G F +M      M +    +     + +++   K+G  E    ++    +
Sbjct: 466 -SMLNLYGRLGQFTKMEKILAEMENGPCTADISTYNILINIYGKAGFLERIEELFVELKE 524

Query: 739 KNVYPDAV 746
           KN  PD V
Sbjct: 525 KNFRPDVV 532



 Score = 73.9 bits (180), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 40/190 (21%), Positives = 85/190 (44%), Gaps = 1/190 (0%)

Query: 340 HTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYN 399
           H+ A   F  ++R  G      ++  ++    +AR       ++ +M  +G +P+    N
Sbjct: 407 HSDAEAVFEEMKR-LGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLN 465

Query: 400 RLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAA 459
            +++ YGR     +   +  +M+   C  D  TY  LI+I+ KAGFL+   +++ +++  
Sbjct: 466 SMLNLYGRLGQFTKMEKILAEMENGPCTADISTYNILINIYGKAGFLERIEELFVELKEK 525

Query: 460 GLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSA 519
              PD  T++  I    +        ++F EM++ GC P+  T  ++++  +     +  
Sbjct: 526 NFRPDVVTWTSRIGAYSRKKLYVKCLEVFEEMIDSGCAPDGGTAKVLLSACSSEEQVEQV 585

Query: 520 LKLYRDMQNA 529
             + R M   
Sbjct: 586 TSVLRTMHKG 595



 Score = 53.9 bits (128), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 32/136 (23%), Positives = 65/136 (47%), Gaps = 4/136 (2%)

Query: 526 MQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGN 585
           ++ + F+PD + ++++++  G      EAE+++ ++    +VP E  Y LL+  +  AG 
Sbjct: 168 LRKSSFQPDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAYCMAGL 227

Query: 586 VRKAWEWYEAMLQAGLRPN---VPTCNSLLSAFL-RVGQLSDAYHLLQGMLNLGLKPSLQ 641
           + +A      M    + P    V   N+ +   + R G   +A  + Q M     KP+ +
Sbjct: 228 IERAEVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTTE 287

Query: 642 TYTLLLSCCTEARSPY 657
           TY L+++   +A   Y
Sbjct: 288 TYNLMINLYGKASKSY 303


>gi|422293946|gb|EKU21246.1| hypothetical protein NGA_2092600 [Nannochloropsis gaditana CCMP526]
          Length = 659

 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 90/306 (29%), Positives = 159/306 (51%), Gaps = 2/306 (0%)

Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLI 402
           ALG    ++ + G + D  ++ T +  LG+A Q+    +L  ++   G  PN+V+YN  I
Sbjct: 245 ALGVLREMQAR-GLRPDLVSFNTAMDALGKAGQYDLALELFTEIEDHGFAPNLVSYNTAI 303

Query: 403 HSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKM-QAAGL 461
           H+ GRA  ++ A ++ ++MQ +   PD V+Y T++   AK      A+++  +M +A G+
Sbjct: 304 HACGRAGMVDRAHELLREMQGLSVRPDSVSYNTVMAAFAKKNQWKAALELLAEMKEAPGV 363

Query: 462 SPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALK 521
            PD  +Y+  ++   KAG  + A +L  E + QG  P++V+YN ++    +A  Y  AL 
Sbjct: 364 DPDLISYNTAMHVCAKAGRWERATELLTEALGQGLQPDVVSYNTVMHACGRAGEYLQALD 423

Query: 522 LYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWG 581
           L+  M+  G  PD+V+++  M           A  +  EM  ++  P+   Y + VD  G
Sbjct: 424 LFGMMEEVGVAPDRVSFNTAMHACNRALKWQAALQILREMEARSIAPNVKSYTIAVDACG 483

Query: 582 KAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQ 641
           +AG   +A E  E M   G+  NV T  + + A  R G +     LL+ M   G++P++ 
Sbjct: 484 RAGEWERALELMEEMEVRGVPANVHTYTAAMDACCRGGAVDRVLVLLEEMDGKGVEPNVV 543

Query: 642 TYTLLL 647
           +YT+ +
Sbjct: 544 SYTIAM 549



 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 99/356 (27%), Positives = 176/356 (49%), Gaps = 5/356 (1%)

Query: 394 NVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMY 453
           +VV +   I + G+A    EAL V ++MQ  G  PD V++ T +D   KAG  D+A++++
Sbjct: 225 DVVGFTMAIKACGQARRWREALGVLREMQARGLRPDLVSFNTAMDALGKAGQYDLALELF 284

Query: 454 KKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKA 513
            +++  G +P+  +Y+  I+  G+AG +  AH+L  EM      P+ V+YN ++A  AK 
Sbjct: 285 TEIEDHGFAPNLVSYNTAIHACGRAGMVDRAHELLREMQGLSVRPDSVSYNTVMAAFAKK 344

Query: 514 RNYQSALKLYRDMQNA-GFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPV 572
             +++AL+L  +M+ A G +PD ++Y+  M V    G  + A  +  E   +   PD   
Sbjct: 345 NQWKAALELLAEMKEAPGVDPDLISYNTAMHVCAKAGRWERATELLTEALGQGLQPDVVS 404

Query: 573 YGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGML 632
           Y  ++   G+AG   +A + +  M + G+ P+  + N+ + A  R  +   A  +L+ M 
Sbjct: 405 YNTVMHACGRAGEYLQALDLFGMMEEVGVAPDRVSFNTAMHACNRALKWQAALQILREME 464

Query: 633 NLGLKPSLQTYTLLLSCCTEARSPYDMGFCHELMAVSGHPA--HMFLLSMPSPGPDGQNV 690
              + P++++YT+ +  C  A          E M V G PA  H +  +M +    G   
Sbjct: 465 ARSIAPNVKSYTIAVDACGRAGEWERALELMEEMEVRGVPANVHTYTAAMDACCRGG--A 522

Query: 691 RDHVGSFLEMMHSEDRESKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAV 746
            D V   LE M  +  E         +D +++ G  + A +V E   Q+ +  D+V
Sbjct: 523 VDRVLVLLEEMDGKGVEPNVVSYTIAMDAMNRVGKWDRASAVLEQMVQRGLRLDSV 578



 Score =  132 bits (331), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 89/333 (26%), Positives = 159/333 (47%), Gaps = 8/333 (2%)

Query: 322 NYSMDAYQANQVLKQLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINK 381
           N +MDA      L +   + +AL  F  +    GF  +  +Y T +   GRA      ++
Sbjct: 265 NTAMDA------LGKAGQYDLALELFTEIEDH-GFAPNLVSYNTAIHACGRAGMVDRAHE 317

Query: 382 LLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQM-QVVGCEPDRVTYCTLIDIH 440
           LL +M     +P+ V+YN ++ ++ + N    AL++  +M +  G +PD ++Y T + + 
Sbjct: 318 LLREMQGLSVRPDSVSYNTVMAAFAKKNQWKAALELLAEMKEAPGVDPDLISYNTAMHVC 377

Query: 441 AKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNL 500
           AKAG  + A ++  +    GL PD  +Y+ +++  G+AG    A  LF  M   G  P+ 
Sbjct: 378 AKAGRWERATELLTEALGQGLQPDVVSYNTVMHACGRAGEYLQALDLFGMMEEVGVAPDR 437

Query: 501 VTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAE 560
           V++N  +    +A  +Q+AL++ R+M+     P+  +Y+I ++  G  G  + A  +  E
Sbjct: 438 VSFNTAMHACNRALKWQAALQILREMEARSIAPNVKSYTIAVDACGRAGEWERALELMEE 497

Query: 561 MRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQ 620
           M  +    +   Y   +D   + G V +     E M   G+ PNV +    + A  RVG+
Sbjct: 498 MEVRGVPANVHTYTAAMDACCRGGAVDRVLVLLEEMDGKGVEPNVVSYTIAMDAMNRVGK 557

Query: 621 LSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEA 653
              A  +L+ M+  GL+    +Y   LS    A
Sbjct: 558 WDRASAVLEQMVQRGLRLDSVSYRTALSTAGRA 590



 Score =  125 bits (315), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 70/243 (28%), Positives = 125/243 (51%)

Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLI 402
           AL     ++   G   D  +Y T + +  +A ++    +LL + +  G QP+VV+YN ++
Sbjct: 350 ALELLAEMKEAPGVDPDLISYNTAMHVCAKAGRWERATELLTEALGQGLQPDVVSYNTVM 409

Query: 403 HSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLS 462
           H+ GRA    +ALD+F  M+ VG  PDRV++ T +    +A     A+ + ++M+A  ++
Sbjct: 410 HACGRAGEYLQALDLFGMMEEVGVAPDRVSFNTAMHACNRALKWQAALQILREMEARSIA 469

Query: 463 PDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKL 522
           P+  +Y++ ++  G+AG  + A +L  EM  +G   N+ TY   +    +       L L
Sbjct: 470 PNVKSYTIAVDACGRAGEWERALELMEEMEVRGVPANVHTYTAAMDACCRGGAVDRVLVL 529

Query: 523 YRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGK 582
             +M   G EP+ V+Y+I M+ +   G  D A AV  +M ++    D   Y   +   G+
Sbjct: 530 LEEMDGKGVEPNVVSYTIAMDAMNRVGKWDRASAVLEQMVQRGLRLDSVSYRTALSTAGR 589

Query: 583 AGN 585
           AG+
Sbjct: 590 AGD 592



 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 73/292 (25%), Positives = 140/292 (47%), Gaps = 15/292 (5%)

Query: 329 QANQVLKQLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVR 388
           +A+++L+++Q  +V              + D  +Y T++    +  Q+ A  +LL +M  
Sbjct: 314 RAHELLREMQGLSV--------------RPDSVSYNTVMAAFAKKNQWKAALELLAEMKE 359

Query: 389 -DGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLD 447
             G  P++++YN  +H   +A     A ++  +    G +PD V+Y T++    +AG   
Sbjct: 360 APGVDPDLISYNTAMHVCAKAGRWERATELLTEALGQGLQPDVVSYNTVMHACGRAGEYL 419

Query: 448 VAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMI 507
            A+D++  M+  G++PD  +++  ++   +A   QAA Q+  EM  +   PN+ +Y I +
Sbjct: 420 QALDLFGMMEEVGVAPDRVSFNTAMHACNRALKWQAALQILREMEARSIAPNVKSYTIAV 479

Query: 508 ALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWV 567
               +A  ++ AL+L  +M+  G   +  TY+  M+     G +D    +  EM  K   
Sbjct: 480 DACGRAGEWERALELMEEMEVRGVPANVHTYTAAMDACCRGGAVDRVLVLLEEMDGKGVE 539

Query: 568 PDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVG 619
           P+   Y + +D   + G   +A    E M+Q GLR +  +  + LS   R G
Sbjct: 540 PNVVSYTIAMDAMNRVGKWDRASAVLEQMVQRGLRLDSVSYRTALSTAGRAG 591



 Score =  110 bits (275), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 71/228 (31%), Positives = 108/228 (47%), Gaps = 1/228 (0%)

Query: 427 EPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQ 486
           E D V +   I    +A     A+ + ++MQA GL PD  +++  ++ LGKAG    A +
Sbjct: 223 EVDVVGFTMAIKACGQARRWREALGVLREMQARGLRPDLVSFNTAMDALGKAGQYDLALE 282

Query: 487 LFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLG 546
           LF E+ + G  PNLV+YN  I    +A     A +L R+MQ     PD V+Y+ VM    
Sbjct: 283 LFTEIEDHGFAPNLVSYNTAIHACGRAGMVDRAHELLREMQGLSVRPDSVSYNTVMAAFA 342

Query: 547 HCGYLDEAEAVFAEMRRKNWV-PDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNV 605
                  A  + AEM+    V PD   Y   + +  KAG   +A E     L  GL+P+V
Sbjct: 343 KKNQWKAALELLAEMKEAPGVDPDLISYNTAMHVCAKAGRWERATELLTEALGQGLQPDV 402

Query: 606 PTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEA 653
            + N+++ A  R G+   A  L   M  +G+ P   ++   +  C  A
Sbjct: 403 VSYNTVMHACGRAGEYLQALDLFGMMEEVGVAPDRVSFNTAMHACNRA 450


>gi|42567647|ref|NP_568141.2| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
           thaliana]
 gi|122223689|sp|Q0WMY5.1|PP365_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g04810, chloroplastic; AltName: Full=Maize PPR4
           homolog; Short=AtPPR4; Flags: Precursor
 gi|110739199|dbj|BAF01515.1| membrane-associated salt-inducible protein-like [Arabidopsis
           thaliana]
 gi|332003406|gb|AED90789.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
           thaliana]
          Length = 952

 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 85/319 (26%), Positives = 164/319 (51%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           ++ G KH+  TY+ M+    + + +     + + MV++G +P+V+ YN +I ++     +
Sbjct: 511 KEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGMKPDVILYNNIISAFCGMGNM 570

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
           + A+   K+MQ +   P   T+  +I  +AK+G +  +++++  M+  G  P   T++ +
Sbjct: 571 DRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGL 630

Query: 472 INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF 531
           IN L +   ++ A ++  EM   G   N  TY  ++   A   +   A + +  +QN G 
Sbjct: 631 INGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGL 690

Query: 532 EPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWE 591
           + D  TY  +++     G +  A AV  EM  +N   +  VY +L+D W + G+V +A +
Sbjct: 691 DVDIFTYEALLKACCKSGRMQSALAVTKEMSARNIPRNSFVYNILIDGWARRGDVWEAAD 750

Query: 592 WYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCT 651
             + M + G++P++ T  S +SA  + G ++ A   ++ M  LG+KP+++TYT L+    
Sbjct: 751 LIQQMKKEGVKPDIHTYTSFISACSKAGDMNRATQTIEEMEALGVKPNIKTYTTLIKGWA 810

Query: 652 EARSPYDMGFCHELMAVSG 670
            A  P     C+E M   G
Sbjct: 811 RASLPEKALSCYEEMKAMG 829



 Score =  119 bits (298), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 69/259 (26%), Positives = 127/259 (49%), Gaps = 4/259 (1%)

Query: 392 QPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMD 451
           +P+   +  ++  YGR   ++ A + F++M+  G  P    Y +LI  +A    +D A+ 
Sbjct: 306 KPSRTEFGLMVKFYGRRGDMHRARETFERMRARGITPTSRIYTSLIHAYAVGRDMDEALS 365

Query: 452 MYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQA 511
             +KM+  G+     TYSVI+    KAGH +AA   F E        N   Y  +I    
Sbjct: 366 CVRKMKEEGIEMSLVTYSVIVGGFSKAGHAEAADYWFDEAKRIHKTLNASIYGKIIYAHC 425

Query: 512 KARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEA--VFAEMRRKNWVPD 569
           +  N + A  L R+M+  G +     Y  +M+  G+    DE +   VF  ++   + P 
Sbjct: 426 QTCNMERAEALVREMEEEGIDAPIAIYHTMMD--GYTMVADEKKGLVVFKRLKECGFTPT 483

Query: 570 EPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQ 629
              YG L++L+ K G + KA E    M + G++ N+ T + +++ F+++   ++A+ + +
Sbjct: 484 VVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFE 543

Query: 630 GMLNLGLKPSLQTYTLLLS 648
            M+  G+KP +  Y  ++S
Sbjct: 544 DMVKEGMKPDVILYNNIIS 562



 Score =  118 bits (296), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 69/296 (23%), Positives = 141/296 (47%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           ++ G +    TY+ +VG   +A    A +   D+  R     N   Y ++I+++ +   +
Sbjct: 371 KEEGIEMSLVTYSVIVGGFSKAGHAEAADYWFDEAKRIHKTLNASIYGKIIYAHCQTCNM 430

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
             A  + ++M+  G +     Y T++D +         + ++K+++  G +P   TY  +
Sbjct: 431 ERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKECGFTPTVVTYGCL 490

Query: 472 INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF 531
           IN   K G +  A ++   M  +G   NL TY++MI    K +++ +A  ++ DM   G 
Sbjct: 491 INLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGM 550

Query: 532 EPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWE 591
           +PD + Y+ ++      G +D A     EM++    P    +  ++  + K+G++R++ E
Sbjct: 551 KPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSLE 610

Query: 592 WYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
            ++ M + G  P V T N L++  +   Q+  A  +L  M   G+  +  TYT ++
Sbjct: 611 VFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIM 666



 Score =  117 bits (294), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 76/288 (26%), Positives = 133/288 (46%), Gaps = 5/288 (1%)

Query: 350 LRRQAGFKHDEHTYTTMVGILGRARQFGAINK---LLDQMVRDGCQPNVVTYNRLIHSYG 406
           ++     +H   T T M  I G A+  G + +   + D M R GC P V T+N LI+   
Sbjct: 577 VKEMQKLRHRPTTRTFMPIIHGYAKS-GDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLV 635

Query: 407 RANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTF 466
               + +A+++  +M + G   +  TY  ++  +A  G    A + + ++Q  GL  D F
Sbjct: 636 EKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIF 695

Query: 467 TYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDM 526
           TY  ++    K+G +Q+A  +  EM  +    N   YNI+I   A+  +   A  L + M
Sbjct: 696 TYEALLKACCKSGRMQSALAVTKEMSARNIPRNSFVYNILIDGWARRGDVWEAADLIQQM 755

Query: 527 QNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNV 586
           +  G +PD  TY+  +      G ++ A     EM      P+   Y  L+  W +A   
Sbjct: 756 KKEGVKPDIHTYTSFISACSKAGDMNRATQTIEEMEALGVKPNIKTYTTLIKGWARASLP 815

Query: 587 RKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNL 634
            KA   YE M   G++P+    + LL++ L    +++AY +  G++ +
Sbjct: 816 EKALSCYEEMKAMGIKPDKAVYHCLLTSLLSRASIAEAY-IYSGVMTI 862



 Score =  112 bits (281), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 74/287 (25%), Positives = 131/287 (45%), Gaps = 1/287 (0%)

Query: 382 LLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHA 441
           L+ +M  +G    +  Y+ ++  Y       + L VFK+++  G  P  VTY  LI+++ 
Sbjct: 436 LVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKECGFTPTVVTYGCLINLYT 495

Query: 442 KAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLV 501
           K G +  A+++ + M+  G+  +  TYS++IN   K      A  +F +MV +G  P+++
Sbjct: 496 KVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGMKPDVI 555

Query: 502 TYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEM 561
            YN +I+      N   A++  ++MQ     P   T+  ++      G +  +  VF  M
Sbjct: 556 LYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSLEVFDMM 615

Query: 562 RRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQL 621
           RR   VP    +  L++   +   + KA E  + M  AG+  N  T   ++  +  VG  
Sbjct: 616 RRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGYASVGDT 675

Query: 622 SDAYHLLQGMLNLGLKPSLQTYTLLL-SCCTEARSPYDMGFCHELMA 667
             A+     + N GL   + TY  LL +CC   R    +    E+ A
Sbjct: 676 GKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEMSA 722



 Score =  101 bits (251), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 64/285 (22%), Positives = 132/285 (46%)

Query: 363 YTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQ 422
           +  MV   GR        +  ++M   G  P    Y  LIH+Y     ++EAL   ++M+
Sbjct: 312 FGLMVKFYGRRGDMHRARETFERMRARGITPTSRIYTSLIHAYAVGRDMDEALSCVRKMK 371

Query: 423 VVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQ 482
             G E   VTY  ++   +KAG  + A   + + +    + +   Y  II    +  +++
Sbjct: 372 EEGIEMSLVTYSVIVGGFSKAGHAEAADYWFDEAKRIHKTLNASIYGKIIYAHCQTCNME 431

Query: 483 AAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVM 542
            A  L  EM  +G    +  Y+ M+       + +  L +++ ++  GF P  VTY  ++
Sbjct: 432 RAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKECGFTPTVVTYGCLI 491

Query: 543 EVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLR 602
            +    G + +A  V   M+ +    +   Y ++++ + K  +   A+  +E M++ G++
Sbjct: 492 NLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGMK 551

Query: 603 PNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
           P+V   N+++SAF  +G +  A   ++ M  L  +P+ +T+  ++
Sbjct: 552 PDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPII 596



 Score = 95.9 bits (237), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 69/262 (26%), Positives = 118/262 (45%), Gaps = 13/262 (4%)

Query: 286 PFSRHFASTGNVVES--VSRILRQWKWGPLAEEALGNTNYSMDAYQANQVLKQLQDHTVA 343
           P    +A +G++  S  V  ++R+    P      G  N  ++  Q  + ++ L + T+A
Sbjct: 594 PIIHGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLA 653

Query: 344 LGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIH 403
                      G   +EHTYT ++         G   +   ++  +G   ++ TY  L+ 
Sbjct: 654 -----------GVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLK 702

Query: 404 SYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSP 463
           +  ++  +  AL V K+M       +   Y  LID  A+ G +  A D+ ++M+  G+ P
Sbjct: 703 ACCKSGRMQSALAVTKEMSARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEGVKP 762

Query: 464 DTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLY 523
           D  TY+  I+   KAG +  A Q   EM   G  PN+ TY  +I   A+A   + AL  Y
Sbjct: 763 DIHTYTSFISACSKAGDMNRATQTIEEMEALGVKPNIKTYTTLIKGWARASLPEKALSCY 822

Query: 524 RDMQNAGFEPDKVTYSIVMEVL 545
            +M+  G +PDK  Y  ++  L
Sbjct: 823 EEMKAMGIKPDKAVYHCLLTSL 844


>gi|359485848|ref|XP_002267947.2| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
           mitochondrial-like [Vitis vinifera]
          Length = 1011

 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 112/438 (25%), Positives = 200/438 (45%), Gaps = 16/438 (3%)

Query: 354 AGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNE 413
            G K +  TY  ++    R        ++ D+MV  G + N++ +N L++   +A  + +
Sbjct: 314 VGLKPEPITYNALIDGFMRQGDIEQAFRIKDEMVACGIEANLIIWNTLLNGVCKAGKMEK 373

Query: 414 ALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIIN 473
           AL++ ++M   G EPD  TY  LI+ H +   +  A ++  +M+   L+P   TYSVIIN
Sbjct: 374 ALEIMQEMMEKGVEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKRKLAPTVLTYSVIIN 433

Query: 474 CLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEP 533
            L + G+LQ  + +  EMV  G  PN V Y  ++   AK    + +  +   M+  G  P
Sbjct: 434 GLCRCGNLQGTNAILREMVMNGLKPNAVVYTTLMTAHAKEGRVEESRMILERMREQGILP 493

Query: 534 DKVTYSIVMEVLGHC--GYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWE 591
           D   Y+ +  ++G C    ++EA     EM  +   P+   YG  +D + KAG +  A  
Sbjct: 494 DVFCYNSL--IIGFCKAKRMEEARTYLMEMLERRLRPNAHTYGAFIDGYSKAGEMEIADR 551

Query: 592 WYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCT 651
           ++  ML  G+ PNV    +L+    + G +++A+ + + +L+  +   +QTY++L+   +
Sbjct: 552 YFNEMLSCGVLPNVGIYTALIEGHCKEGNVTEAFSVFRFILSRRVLQDVQTYSVLIHGLS 611

Query: 652 EARSPYD-MGFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRESKR 710
                ++  G   EL      P      S+ S      NV D     LE M  +      
Sbjct: 612 RNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQGNV-DKASQLLEEMCIKGINPDI 670

Query: 711 GLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAVKEKGMSYWLINLHVMSDGTAVIAL 770
              + ++D L K+G         E+   KN++ D ++ +G++   +    M DG      
Sbjct: 671 VTYNILIDGLCKAG---------EIERAKNLFDD-IEGRGLTPNCVTYAAMVDGYCKSKN 720

Query: 771 SRTLAWFRKQMLISGVGP 788
                   ++ML+ GV P
Sbjct: 721 PTAAFQLLEEMLLRGVPP 738



 Score =  143 bits (360), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 101/386 (26%), Positives = 181/386 (46%), Gaps = 3/386 (0%)

Query: 362 TYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQM 421
           TY+ ++  L R       N +L +MV +G +PN V Y  L+ ++ +   + E+  + ++M
Sbjct: 427 TYSVIINGLCRCGNLQGTNAILREMVMNGLKPNAVVYTTLMTAHAKEGRVEESRMILERM 486

Query: 422 QVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHL 481
           +  G  PD   Y +LI    KA  ++ A     +M    L P+  TY   I+   KAG +
Sbjct: 487 REQGILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLERRLRPNAHTYGAFIDGYSKAGEM 546

Query: 482 QAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIV 541
           + A + F EM++ G +PN+  Y  +I    K  N   A  ++R + +     D  TYS++
Sbjct: 547 EIADRYFNEMLSCGVLPNVGIYTALIEGHCKEGNVTEAFSVFRFILSRRVLQDVQTYSVL 606

Query: 542 MEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGL 601
           +  L   G + EA  +F+E++ K  +P+   Y  L+    K GNV KA +  E M   G+
Sbjct: 607 IHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQGNVDKASQLLEEMCIKGI 666

Query: 602 RPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGF 661
            P++ T N L+    + G++  A +L   +   GL P+  TY  ++    ++++P     
Sbjct: 667 NPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYAAMVDGYCKSKNPTAAFQ 726

Query: 662 CHELMAVSGHPAHMFLLS-MPSPGPDGQNVRDHVGSFLEMMHSEDRESKRGLVDAVVDFL 720
             E M + G P   F+ + + +     +     +  F EM+  E   +     + +++  
Sbjct: 727 LLEEMLLRGVPPDAFIYNVILNFCCKEEKFEKALDLFQEML--EKGFASTVSFNTLIEGY 784

Query: 721 HKSGLKEEAGSVWEVAAQKNVYPDAV 746
            KSG  +EA  + E   +K   P+ V
Sbjct: 785 CKSGKLQEANHLLEEMIEKQFIPNHV 810



 Score =  138 bits (347), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 83/282 (29%), Positives = 142/282 (50%)

Query: 362 TYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQM 421
           TY  ++G L RAR      +L   MV  G  P++ TY+ LI+ +       EA  +  +M
Sbjct: 252 TYNVIIGGLCRARLLDEAIELKRSMVDKGLVPDLYTYDILINGFCMEKRSREAKLMLLEM 311

Query: 422 QVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHL 481
             VG +P+ +TY  LID   + G ++ A  +  +M A G+  +   ++ ++N + KAG +
Sbjct: 312 IDVGLKPEPITYNALIDGFMRQGDIEQAFRIKDEMVACGIEANLIIWNTLLNGVCKAGKM 371

Query: 482 QAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIV 541
           + A ++  EM+ +G  P+  TY+++I    + +N   A +L  +M+     P  +TYS++
Sbjct: 372 EKALEIMQEMMEKGVEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKRKLAPTVLTYSVI 431

Query: 542 MEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGL 601
           +  L  CG L    A+  EM      P+  VY  L+    K G V ++    E M + G+
Sbjct: 432 INGLCRCGNLQGTNAILREMVMNGLKPNAVVYTTLMTAHAKEGRVEESRMILERMREQGI 491

Query: 602 RPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTY 643
            P+V   NSL+  F +  ++ +A   L  ML   L+P+  TY
Sbjct: 492 LPDVFCYNSLIIGFCKAKRMEEARTYLMEMLERRLRPNAHTY 533



 Score =  135 bits (340), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 104/440 (23%), Positives = 187/440 (42%), Gaps = 46/440 (10%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           R+ G   D   Y +++    +A++       L +M+    +PN  TY   I  Y +A  +
Sbjct: 487 REQGILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLERRLRPNAHTYGAFIDGYSKAGEM 546

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
             A   F +M   G  P+   Y  LI+ H K G +  A  +++ + +  +  D  TYSV+
Sbjct: 547 EIADRYFNEMLSCGVLPNVGIYTALIEGHCKEGNVTEAFSVFRFILSRRVLQDVQTYSVL 606

Query: 472 INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF 531
           I+ L + G +  A  +F E+  +G +PN  TYN +I+   K  N   A +L  +M   G 
Sbjct: 607 IHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQGNVDKASQLLEEMCIKGI 666

Query: 532 EPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWE 591
            PD VTY+I+++ L   G ++ A+ +F ++  +   P+   Y  +VD + K+ N   A++
Sbjct: 667 NPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYAAMVDGYCKSKNPTAAFQ 726

Query: 592 WYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCT 651
             E ML  G+ P+    N +L+   +  +   A  L Q ML  G   ++   TL+   C 
Sbjct: 727 LLEEMLLRGVPPDAFIYNVILNFCCKEEKFEKALDLFQEMLEKGFASTVSFNTLIEGYCK 786

Query: 652 EARSPYDMGFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRESKRG 711
             +         E++     P H+   S+                               
Sbjct: 787 SGKLQEANHLLEEMIEKQFIPNHVTYTSL------------------------------- 815

Query: 712 LVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAVKEKGMSYWLINLHVMSDGTAVIALS 771
                +D   K+G+  EA  +W    ++NV P A     + +   N+  MS+ +A+    
Sbjct: 816 -----IDHNCKAGMMGEAKRLWLEMQERNVMPTAKTYTSLLHGYHNIGNMSEVSALF--- 867

Query: 772 RTLAWFRKQMLISGVGPSRI 791
                  ++M+  G+ P ++
Sbjct: 868 -------EEMVAKGIEPDKM 880



 Score =  135 bits (339), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 90/371 (24%), Positives = 169/371 (45%), Gaps = 19/371 (5%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           G   D +TY  ++      ++      +L +M+  G +P  +TYN LI  + R   + +A
Sbjct: 280 GLVPDLYTYDILINGFCMEKRSREAKLMLLEMIDVGLKPEPITYNALIDGFMRQGDIEQA 339

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
             +  +M   G E + + + TL++   KAG ++ A+++ ++M   G+ PD+ TYS++I  
Sbjct: 340 FRIKDEMVACGIEANLIIWNTLLNGVCKAGKMEKALEIMQEMMEKGVEPDSQTYSLLIEG 399

Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPD 534
             +  ++  A +L  EM  +   P ++TY+++I    +  N Q    + R+M   G +P+
Sbjct: 400 HCRGQNMARAFELLDEMKKRKLAPTVLTYSVIINGLCRCGNLQGTNAILREMVMNGLKPN 459

Query: 535 KVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYE 594
            V Y+ +M      G ++E+  +   MR +  +PD   Y  L+  + KA  + +A  +  
Sbjct: 460 AVVYTTLMTAHAKEGRVEESRMILERMREQGILPDVFCYNSLIIGFCKAKRMEEARTYLM 519

Query: 595 AMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEAR 654
            ML+  LRPN  T  + +  + + G++  A      ML+ G+ P++  YT L+       
Sbjct: 520 EMLERRLRPNAHTYGAFIDGYSKAGEMEIADRYFNEMLSCGVLPNVGIYTALIE------ 573

Query: 655 SPYDMGFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRESKRGLVD 714
                G C E           F+LS        + V   V ++  ++H   R  K     
Sbjct: 574 -----GHCKEGNVTEAFSVFRFILS--------RRVLQDVQTYSVLIHGLSRNGKMHEAF 620

Query: 715 AVVDFLHKSGL 725
            +   L + GL
Sbjct: 621 GIFSELQEKGL 631



 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 84/297 (28%), Positives = 150/297 (50%), Gaps = 4/297 (1%)

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
           + G + D  TY+ ++    R +      +LLD+M +    P V+TY+ +I+   R   L 
Sbjct: 383 EKGVEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKRKLAPTVLTYSVIINGLCRCGNLQ 442

Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
               + ++M + G +P+ V Y TL+  HAK G ++ +  + ++M+  G+ PD F Y+ +I
Sbjct: 443 GTNAILREMVMNGLKPNAVVYTTLMTAHAKEGRVEESRMILERMREQGILPDVFCYNSLI 502

Query: 473 NCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFE 532
               KA  ++ A     EM+ +   PN  TY   I   +KA   + A + + +M + G  
Sbjct: 503 IGFCKAKRMEEARTYLMEMLERRLRPNAHTYGAFIDGYSKAGEMEIADRYFNEMLSCGVL 562

Query: 533 PDKVTYSIVMEVLGHC--GYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAW 590
           P+   Y+ ++E  GHC  G + EA +VF  +  +  + D   Y +L+    + G + +A+
Sbjct: 563 PNVGIYTALIE--GHCKEGNVTEAFSVFRFILSRRVLQDVQTYSVLIHGLSRNGKMHEAF 620

Query: 591 EWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
             +  + + GL PN  T NSL+S   + G +  A  LL+ M   G+ P + TY +L+
Sbjct: 621 GIFSELQEKGLLPNAFTYNSLISGSCKQGNVDKASQLLEEMCIKGINPDIVTYNILI 677



 Score =  132 bits (333), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 88/308 (28%), Positives = 157/308 (50%), Gaps = 8/308 (2%)

Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINK---LLDQMVRDGCQPNVVTYN 399
           A G F+ L+ + G   +  TY +++   G  +Q G ++K   LL++M   G  P++VTYN
Sbjct: 619 AFGIFSELQEK-GLLPNAFTYNSLIS--GSCKQ-GNVDKASQLLEEMCIKGINPDIVTYN 674

Query: 400 RLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAA 459
            LI    +A  +  A ++F  ++  G  P+ VTY  ++D + K+     A  + ++M   
Sbjct: 675 ILIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYAAMVDGYCKSKNPTAAFQLLEEMLLR 734

Query: 460 GLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSA 519
           G+ PD F Y+VI+N   K    + A  LF EM+ +G   + V++N +I    K+   Q A
Sbjct: 735 GVPPDAFIYNVILNFCCKEEKFEKALDLFQEMLEKG-FASTVSFNTLIEGYCKSGKLQEA 793

Query: 520 LKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDL 579
             L  +M    F P+ VTY+ +++     G + EA+ ++ EM+ +N +P    Y  L+  
Sbjct: 794 NHLLEEMIEKQFIPNHVTYTSLIDHNCKAGMMGEAKRLWLEMQERNVMPTAKTYTSLLHG 853

Query: 580 WGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPS 639
           +   GN+ +    +E M+  G+ P+  T   ++ A+ R G + +A  L   +L  G+  S
Sbjct: 854 YHNIGNMSEVSALFEEMVAKGIEPDKMTYYVMIDAYCREGNVMEACKLKDEILVKGMPMS 913

Query: 640 LQTYTLLL 647
           +  Y  L+
Sbjct: 914 VAAYDALI 921



 Score =  130 bits (327), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 76/284 (26%), Positives = 141/284 (49%)

Query: 365 TMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVV 424
           +++G L +  +     K+ D M      P+V TY  +I ++ +   + +A  V  +M   
Sbjct: 185 SLLGDLLKGNKVELFWKVFDGMCAHKVLPDVYTYTNMISAHCKVGNVKDAKRVLLEMGEK 244

Query: 425 GCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAA 484
           GC P+ VTY  +I    +A  LD A+++ + M   GL PD +TY ++IN        + A
Sbjct: 245 GCSPNLVTYNVIIGGLCRARLLDEAIELKRSMVDKGLVPDLYTYDILINGFCMEKRSREA 304

Query: 485 HQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEV 544
             +  EM++ G  P  +TYN +I    +  + + A ++  +M   G E + + ++ ++  
Sbjct: 305 KLMLLEMIDVGLKPEPITYNALIDGFMRQGDIEQAFRIKDEMVACGIEANLIIWNTLLNG 364

Query: 545 LGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPN 604
           +   G +++A  +  EM  K   PD   Y LL++   +  N+ +A+E  + M +  L P 
Sbjct: 365 VCKAGKMEKALEIMQEMMEKGVEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKRKLAPT 424

Query: 605 VPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
           V T + +++   R G L     +L+ M+  GLKP+   YT L++
Sbjct: 425 VLTYSVIINGLCRCGNLQGTNAILREMVMNGLKPNAVVYTTLMT 468



 Score =  124 bits (310), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 97/404 (24%), Positives = 174/404 (43%), Gaps = 57/404 (14%)

Query: 285 APFSRHFASTGN--VVESVSRILRQWKWGPLAEEALGNTNYSMDAYQANQVLKQLQDHTV 342
           A FS   A T N   V  ++ +L    W  L E +      + D  ++  +  Q+ D   
Sbjct: 12  ASFSSSQALTQNEDSVREITTLLNSHNWQALMESSDIPKKLNTDIIRSVILQNQVGDPKR 71

Query: 343 ALGFFNWLRRQAGF---KHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYN 399
            L FF W + + G    + D    + +   L  +  +G  + L+  ++R+   P +    
Sbjct: 72  LLNFFYWSQHKMGTSTAQQDLDVLSALAVNLCNSNWYGPASDLIKCIIRNSDSP-LAVLG 130

Query: 400 RLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMD-------- 451
            ++  Y   N                  P+ V +  L+D + K GFL  A++        
Sbjct: 131 SIVKCYRSCNG----------------SPNSVIFDMLMDSYRKMGFLVEAVNVFLGPKNF 174

Query: 452 ---------------------------MYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAA 484
                                      ++  M A  + PD +TY+ +I+   K G+++ A
Sbjct: 175 EFRPSLLSCNSLLGDLLKGNKVELFWKVFDGMCAHKVLPDVYTYTNMISAHCKVGNVKDA 234

Query: 485 HQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEV 544
            ++  EM  +GC PNLVTYN++I    +AR    A++L R M + G  PD  TY I++  
Sbjct: 235 KRVLLEMGEKGCSPNLVTYNVIIGGLCRARLLDEAIELKRSMVDKGLVPDLYTYDILING 294

Query: 545 LGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPN 604
                   EA+ +  EM      P+   Y  L+D + + G++ +A+   + M+  G+  N
Sbjct: 295 FCMEKRSREAKLMLLEMIDVGLKPEPITYNALIDGFMRQGDIEQAFRIKDEMVACGIEAN 354

Query: 605 VPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
           +   N+LL+   + G++  A  ++Q M+  G++P  QTY+LL+ 
Sbjct: 355 LIIWNTLLNGVCKAGKMEKALEIMQEMMEKGVEPDSQTYSLLIE 398



 Score = 89.4 bits (220), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 58/217 (26%), Positives = 104/217 (47%)

Query: 362 TYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQM 421
           ++ T++    ++ +    N LL++M+     PN VTY  LI    +A  + EA  ++ +M
Sbjct: 776 SFNTLIEGYCKSGKLQEANHLLEEMIEKQFIPNHVTYTSLIDHNCKAGMMGEAKRLWLEM 835

Query: 422 QVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHL 481
           Q     P   TY +L+  +   G +     ++++M A G+ PD  TY V+I+   + G++
Sbjct: 836 QERNVMPTAKTYTSLLHGYHNIGNMSEVSALFEEMVAKGIEPDKMTYYVMIDAYCREGNV 895

Query: 482 QAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIV 541
             A +L  E++ +G   ++  Y+ +I    K   +   LKL  ++  +GF     T S++
Sbjct: 896 MEACKLKDEILVKGMPMSVAAYDALIQALCKKEEFFEVLKLLNEIGESGFRLGLPTCSVI 955

Query: 542 MEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVD 578
                  G +DEA  V   M +  WV +    G LVD
Sbjct: 956 ARGFQIAGNMDEAAEVLRSMVKFGWVSNTTSLGDLVD 992



 Score = 43.9 bits (102), Expect = 0.34,   Method: Compositional matrix adjust.
 Identities = 45/197 (22%), Positives = 79/197 (40%), Gaps = 8/197 (4%)

Query: 337  LQDHTVALGFFN-----WLRRQA-GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDG 390
            L DH    G        WL  Q         TYT+++           ++ L ++MV  G
Sbjct: 815  LIDHNCKAGMMGEAKRLWLEMQERNVMPTAKTYTSLLHGYHNIGNMSEVSALFEEMVAKG 874

Query: 391  CQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLID-IHAKAGFLDVA 449
             +P+ +TY  +I +Y R   + EA  +  ++ V G       Y  LI  +  K  F +V 
Sbjct: 875  IEPDKMTYYVMIDAYCREGNVMEACKLKDEILVKGMPMSVAAYDALIQALCKKEEFFEV- 933

Query: 450  MDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIAL 509
            + +  ++  +G      T SVI      AG++  A ++   MV  G + N  +   ++  
Sbjct: 934  LKLLNEIGESGFRLGLPTCSVIARGFQIAGNMDEAAEVLRSMVKFGWVSNTTSLGDLVDG 993

Query: 510  QAKARNYQSALKLYRDM 526
                 N + +  L + M
Sbjct: 994  NQNGANSEDSDNLLKQM 1010


>gi|297805766|ref|XP_002870767.1| EMB2745 [Arabidopsis lyrata subsp. lyrata]
 gi|297316603|gb|EFH47026.1| EMB2745 [Arabidopsis lyrata subsp. lyrata]
          Length = 747

 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 119/396 (30%), Positives = 195/396 (49%), Gaps = 21/396 (5%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           G+  DE TY T++    +   F     +  +M+R G  P+V+TY  LIHS  +A  +N A
Sbjct: 305 GYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLSPSVITYTSLIHSMCKAGNMNRA 364

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
            +   QM+V G  P+  TY TL+D  ++ G+++ A  + K+M   G SP   TY+ +IN 
Sbjct: 365 TEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLKEMIDNGFSPSVVTYNALING 424

Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPD 534
              AG +  A  +  +M  +G  P++V+Y+ +++   ++ +   AL++ R M   G +PD
Sbjct: 425 HCIAGKMVDAIAVLEDMKEKGLTPDVVSYSTVLSGFCRSYDVDEALRVKRKMVAKGIKPD 484

Query: 535 KVTYSIVMEVLGHCGYLDEAEA--VFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEW 592
            +TYS +++  G C      EA  +F EM R    PDE  Y  L++ +   G+++KA + 
Sbjct: 485 TITYSSLIQ--GFCEQRRTKEACDLFDEMLRVGLPPDEFTYTALINAYCMEGDLQKAIQL 542

Query: 593 YEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCT- 651
           +  M++ G+ P+V T + L++   +  +  +A  LL  +      PS  TY  L+  C+ 
Sbjct: 543 HNEMVEKGVLPDVVTYSVLINGLNKQARTREAKRLLLKLFYEESVPSDVTYHTLIENCSN 602

Query: 652 -EARSPYDM--GFCHELMAVSGHPAHMFLLSMPSPGPDGQ--NVRDH---VGSFLEMMHS 703
            E +S   +  GFC + M          +L   +  PDG   NV  H    G  +   +S
Sbjct: 603 IEFKSVVSLIKGFCMKGMMTEADQVFESMLE-KNHKPDGTAYNVMIHGHCRGGDIRKAYS 661

Query: 704 EDRES-KRGL------VDAVVDFLHKSGLKEEAGSV 732
             +E  K G       V A+V  LHK G   E  SV
Sbjct: 662 LYKEMVKSGFLLHTVTVIALVKTLHKEGKVNELNSV 697



 Score =  153 bits (386), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 88/289 (30%), Positives = 146/289 (50%), Gaps = 11/289 (3%)

Query: 374 RQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTY 433
           R       +  +M++    PNV TYN LI  +  A  L+ AL  F +M+  GC P+ VTY
Sbjct: 184 RNISFAENVFKEMLQSQVSPNVFTYNILIRGFCLAGNLDVALRFFDRMEKKGCLPNVVTY 243

Query: 434 CTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVN 493
            TLID + K   +D   ++ + M   GL P+  +Y+V+IN L + G ++    +  EM  
Sbjct: 244 NTLIDGYCKLRKIDDGFELLRSMALKGLEPNLISYNVVINGLCREGRMKEISFVLTEMNK 303

Query: 494 QGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDE 553
           +G   + VTYN +I    K  N+  AL ++ +M   G  P  +TY+ ++  +   G ++ 
Sbjct: 304 RGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLSPSVITYTSLIHSMCKAGNMNR 363

Query: 554 AEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLS 613
           A     +MR +   P+E  Y  LVD + + G + +A+   + M+  G  P+V T N+L++
Sbjct: 364 ATEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLKEMIDNGFSPSVVTYNALIN 423

Query: 614 AFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGFC 662
                G++ DA  +L+ M   GL P + +Y+ +LS           GFC
Sbjct: 424 GHCIAGKMVDAIAVLEDMKEKGLTPDVVSYSTVLS-----------GFC 461



 Score =  144 bits (364), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 103/362 (28%), Positives = 177/362 (48%), Gaps = 13/362 (3%)

Query: 289 RHFASTGNVVESVSRILRQWKWGPLAEEALGNTNYSMDAYQANQVLKQLQDHTVALGFFN 348
           R F   GN+  ++    R  K G L      NT   +D Y     L+++ D       F 
Sbjct: 213 RGFCLAGNLDVALRFFDRMEKKGCLPNVVTYNT--LIDGYCK---LRKIDDG------FE 261

Query: 349 WLRRQA--GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYG 406
            LR  A  G + +  +Y  ++  L R  +   I+ +L +M + G   + VTYN LI  Y 
Sbjct: 262 LLRSMALKGLEPNLISYNVVINGLCREGRMKEISFVLTEMNKRGYSLDEVTYNTLIKGYC 321

Query: 407 RANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTF 466
           +    ++AL +  +M   G  P  +TY +LI    KAG ++ A +   +M+  GL P+  
Sbjct: 322 KEGNFHQALVMHAEMLRHGLSPSVITYTSLIHSMCKAGNMNRATEFLDQMRVRGLCPNER 381

Query: 467 TYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDM 526
           TY+ +++   + G++  A+++  EM++ G  P++VTYN +I     A     A+ +  DM
Sbjct: 382 TYTTLVDGFSQKGYMNEAYRVLKEMIDNGFSPSVVTYNALINGHCIAGKMVDAIAVLEDM 441

Query: 527 QNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNV 586
           +  G  PD V+YS V+        +DEA  V  +M  K   PD   Y  L+  + +    
Sbjct: 442 KEKGLTPDVVSYSTVLSGFCRSYDVDEALRVKRKMVAKGIKPDTITYSSLIQGFCEQRRT 501

Query: 587 RKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLL 646
           ++A + ++ ML+ GL P+  T  +L++A+   G L  A  L   M+  G+ P + TY++L
Sbjct: 502 KEACDLFDEMLRVGLPPDEFTYTALINAYCMEGDLQKAIQLHNEMVEKGVLPDVVTYSVL 561

Query: 647 LS 648
           ++
Sbjct: 562 IN 563



 Score =  142 bits (359), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 83/265 (31%), Positives = 138/265 (52%), Gaps = 3/265 (1%)

Query: 385 QMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLID--IHAK 442
           Q   D C      ++ ++ SY R   +++AL +    Q  G  P  ++Y  ++D  I +K
Sbjct: 124 QETYDLCNSTSSVFDLVVKSYSRLCLIDKALSIVHLSQAHGFMPGVLSYNAVLDATIRSK 183

Query: 443 AGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVT 502
              +  A +++K+M  + +SP+ FTY+++I     AG+L  A + F  M  +GC+PN+VT
Sbjct: 184 RN-ISFAENVFKEMLQSQVSPNVFTYNILIRGFCLAGNLDVALRFFDRMEKKGCLPNVVT 242

Query: 503 YNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMR 562
           YN +I    K R      +L R M   G EP+ ++Y++V+  L   G + E   V  EM 
Sbjct: 243 YNTLIDGYCKLRKIDDGFELLRSMALKGLEPNLISYNVVINGLCREGRMKEISFVLTEMN 302

Query: 563 RKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLS 622
           ++ +  DE  Y  L+  + K GN  +A   +  ML+ GL P+V T  SL+ +  + G ++
Sbjct: 303 KRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLSPSVITYTSLIHSMCKAGNMN 362

Query: 623 DAYHLLQGMLNLGLKPSLQTYTLLL 647
            A   L  M   GL P+ +TYT L+
Sbjct: 363 RATEFLDQMRVRGLCPNERTYTTLV 387



 Score =  139 bits (351), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 114/438 (26%), Positives = 188/438 (42%), Gaps = 58/438 (13%)

Query: 362 TYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQM 421
           TY  ++     A       +  D+M + GC PNVVTYN LI  Y +   +++  ++ + M
Sbjct: 207 TYNILIRGFCLAGNLDVALRFFDRMEKKGCLPNVVTYNTLIDGYCKLRKIDDGFELLRSM 266

Query: 422 QVVGCEP-----------------------------------DRVTYCTLIDIHAKAGFL 446
            + G EP                                   D VTY TLI  + K G  
Sbjct: 267 ALKGLEPNLISYNVVINGLCREGRMKEISFVLTEMNKRGYSLDEVTYNTLIKGYCKEGNF 326

Query: 447 DVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIM 506
             A+ M+ +M   GLSP   TY+ +I+ + KAG++  A +   +M  +G  PN  TY  +
Sbjct: 327 HQALVMHAEMLRHGLSPSVITYTSLIHSMCKAGNMNRATEFLDQMRVRGLCPNERTYTTL 386

Query: 507 IALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHC--GYLDEAEAVFAEMRRK 564
           +   ++      A ++ ++M + GF P  VTY+ ++   GHC  G + +A AV  +M+ K
Sbjct: 387 VDGFSQKGYMNEAYRVLKEMIDNGFSPSVVTYNALIN--GHCIAGKMVDAIAVLEDMKEK 444

Query: 565 NWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDA 624
              PD   Y  ++  + ++ +V +A      M+  G++P+  T +SL+  F    +  +A
Sbjct: 445 GLTPDVVSYSTVLSGFCRSYDVDEALRVKRKMVAKGIKPDTITYSSLIQGFCEQRRTKEA 504

Query: 625 YHLLQGMLNLGLKPSLQTYTLLLSC-CTEARSPYDMGFCHELMAVSGHPAHMFLLSMPSP 683
             L   ML +GL P   TYT L++  C E      +   H  M   G    +   S+   
Sbjct: 505 CDLFDEMLRVGLPPDEFTYTALINAYCMEGDLQKAIQL-HNEMVEKGVLPDVVTYSVLIN 563

Query: 684 GPDGQ-NVRDHVGSFLEMMHSEDRESK---------------RGLVDAVVDFLHKSGLKE 727
           G + Q   R+     L++ + E   S                + +V  +  F  K G+  
Sbjct: 564 GLNKQARTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMK-GMMT 622

Query: 728 EAGSVWEVAAQKNVYPDA 745
           EA  V+E   +KN  PD 
Sbjct: 623 EADQVFESMLEKNHKPDG 640



 Score =  134 bits (336), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 94/324 (29%), Positives = 163/324 (50%), Gaps = 39/324 (12%)

Query: 329 QANQVLKQLQDHTVALGFFNWLRRQAGFKHDEHTYTTMV-GILGRARQFGAINKLLDQMV 387
           +A +VLK++ D+              GF     TY  ++ G     +   AI  +L+ M 
Sbjct: 398 EAYRVLKEMIDN--------------GFSPSVVTYNALINGHCIAGKMVDAI-AVLEDMK 442

Query: 388 RDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLD 447
             G  P+VV+Y+ ++  + R+  ++EAL V ++M   G +PD +TY +LI    +     
Sbjct: 443 EKGLTPDVVSYSTVLSGFCRSYDVDEALRVKRKMVAKGIKPDTITYSSLIQGFCEQRRTK 502

Query: 448 VAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMI 507
            A D++ +M   GL PD FTY+ +IN     G LQ A QL  EMV +G +P++VTY+++I
Sbjct: 503 EACDLFDEMLRVGLPPDEFTYTALINAYCMEGDLQKAIQLHNEMVEKGVLPDVVTYSVLI 562

Query: 508 -ALQAKARNYQSA---LKLYRDMQNAGFEPDKVTYSIVME-------------VLGHC-- 548
             L  +AR  ++    LKL+ +       P  VTY  ++E             + G C  
Sbjct: 563 NGLNKQARTREAKRLLLKLFYEES----VPSDVTYHTLIENCSNIEFKSVVSLIKGFCMK 618

Query: 549 GYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTC 608
           G + EA+ VF  M  KN  PD   Y +++    + G++RKA+  Y+ M+++G   +  T 
Sbjct: 619 GMMTEADQVFESMLEKNHKPDGTAYNVMIHGHCRGGDIRKAYSLYKEMVKSGFLLHTVTV 678

Query: 609 NSLLSAFLRVGQLSDAYHLLQGML 632
            +L+    + G++++   ++  +L
Sbjct: 679 IALVKTLHKEGKVNELNSVIANVL 702



 Score =  100 bits (250), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 73/303 (24%), Positives = 126/303 (41%), Gaps = 50/303 (16%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           ++ G   D  +Y+T++    R+       ++  +MV  G +P+ +TY+ LI  +      
Sbjct: 442 KEKGLTPDVVSYSTVLSGFCRSYDVDEALRVKRKMVAKGIKPDTITYSSLIQGFCEQRRT 501

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
            EA D+F +M  VG  PD  TY  LI+ +   G L  A+ ++ +M   G+ PD  TYSV+
Sbjct: 502 KEACDLFDEMLRVGLPPDEFTYTALINAYCMEGDLQKAIQLHNEMVEKGVLPDVVTYSVL 561

Query: 472 INCLGK--------------------------------------------------AGHL 481
           IN L K                                                   G +
Sbjct: 562 INGLNKQARTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMM 621

Query: 482 QAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIV 541
             A Q+F  M+ +   P+   YN+MI    +  + + A  LY++M  +GF    VT   +
Sbjct: 622 TEADQVFESMLEKNHKPDGTAYNVMIHGHCRGGDIRKAYSLYKEMVKSGFLLHTVTVIAL 681

Query: 542 MEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGL 601
           ++ L   G ++E  +V A + R   + +     +LV++  + GN+    +    M + G 
Sbjct: 682 VKTLHKEGKVNELNSVIANVLRSCELSEAEQAKVLVEINHREGNMDVVLDVLAEMAKDGF 741

Query: 602 RPN 604
            PN
Sbjct: 742 LPN 744


>gi|297739257|emb|CBI28908.3| unnamed protein product [Vitis vinifera]
          Length = 658

 Score =  154 bits (388), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 95/332 (28%), Positives = 161/332 (48%), Gaps = 10/332 (3%)

Query: 323 YSMDAYQANQVLKQLQDHTVALGFFN-----WLR-RQAGFKHDEHTYTTMVGILGRARQF 376
           + M  + AN +++       ALG        W R +++G +   +T+  ++  L  +   
Sbjct: 186 FLMTVFAANSLIRSFG----ALGMVEELLWVWRRMKESGIEPSLYTFNFLLNGLVNSMFI 241

Query: 377 GAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTL 436
            +  ++ + M      P+VV+YN +I  Y +A    +A++ F  M+    EPD++TY TL
Sbjct: 242 ESAERVFEVMECGKIGPDVVSYNTMIKGYCKAGNTKKAMEKFTDMEKRNLEPDKITYLTL 301

Query: 437 IDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGC 496
           I      G  D  + +Y++M+  GL      YS++I  L K G       +F  M  +GC
Sbjct: 302 IQACYSEGNFDSCLHLYQEMEERGLEIPPHAYSLVIGGLCKDGRTVEGSSVFENMNKKGC 361

Query: 497 IPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEA 556
             N+  Y  +I    K  N   A+ L+  M+  GFEPD VTY +++  L   G LDEA  
Sbjct: 362 KANVAIYTALIDAYGKNGNVNEAINLFERMKGEGFEPDDVTYGVIVNGLCKSGRLDEAVE 421

Query: 557 VFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFL 616
            F   +      +   Y  L+D  GKAG V +A +++E M++ G   +    N+L+ A  
Sbjct: 422 YFEFCKDNEVAVNAMFYSSLIDGLGKAGRVDEAEKFFEEMVERGCPQDSYCYNALIDALA 481

Query: 617 RVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
           + G++ +A  L + M   G   ++ TYT+L+S
Sbjct: 482 KSGKMEEALVLFKRMEKEGCDQTVYTYTILIS 513



 Score =  137 bits (346), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 96/414 (23%), Positives = 177/414 (42%)

Query: 342 VALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRL 401
           +A  FF W  +Q  + H    Y +++ +L  +  F  +  +  +    G    V   N L
Sbjct: 137 IAFRFFWWAGKQKNYIHKIECYVSLIDVLSLSSDFDRVRCIFGEFKEKGFLMTVFAANSL 196

Query: 402 IHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGL 461
           I S+G    + E L V+++M+  G EP   T+  L++    + F++ A  +++ M+   +
Sbjct: 197 IRSFGALGMVEELLWVWRRMKESGIEPSLYTFNFLLNGLVNSMFIESAERVFEVMECGKI 256

Query: 462 SPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALK 521
            PD  +Y+ +I    KAG+ + A + F +M  +   P+ +TY  +I       N+ S L 
Sbjct: 257 GPDVVSYNTMIKGYCKAGNTKKAMEKFTDMEKRNLEPDKITYLTLIQACYSEGNFDSCLH 316

Query: 522 LYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWG 581
           LY++M+  G E     YS+V+  L   G   E  +VF  M +K    +  +Y  L+D +G
Sbjct: 317 LYQEMEERGLEIPPHAYSLVIGGLCKDGRTVEGSSVFENMNKKGCKANVAIYTALIDAYG 376

Query: 582 KAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQ 641
           K GNV +A   +E M   G  P+  T   +++   + G+L +A    +   +  +  +  
Sbjct: 377 KNGNVNEAINLFERMKGEGFEPDDVTYGVIVNGLCKSGRLDEAVEYFEFCKDNEVAVNAM 436

Query: 642 TYTLLLSCCTEARSPYDMGFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMM 701
            Y+ L+    +A    +     E M   G P   +  +            +      + M
Sbjct: 437 FYSSLIDGLGKAGRVDEAEKFFEEMVERGCPQDSYCYNALIDALAKSGKMEEALVLFKRM 496

Query: 702 HSEDRESKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAVKEKGMSYWL 755
             E  +        ++  L K    EEA  +W++   K + P     + +S  L
Sbjct: 497 EKEGCDQTVYTYTILISGLFKEHRNEEALKLWDLMIDKGITPTTASFRALSVGL 550



 Score =  106 bits (264), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 85/386 (22%), Positives = 161/386 (41%), Gaps = 15/386 (3%)

Query: 276 REMKIPAGLAP--FSRHFASTGNV----VESVSRILRQWKWGPLAEEALGNTNYSMDAYQ 329
           R MK  +G+ P  ++ +F   G V    +ES  R+    + G +  + +          +
Sbjct: 214 RRMK-ESGIEPSLYTFNFLLNGLVNSMFIESAERVFEVMECGKIGPDVVSYNTMIKGYCK 272

Query: 330 ANQVLKQLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRD 389
           A    K ++  T           +   + D+ TY T++        F +   L  +M   
Sbjct: 273 AGNTKKAMEKFTDM--------EKRNLEPDKITYLTLIQACYSEGNFDSCLHLYQEMEER 324

Query: 390 GCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVA 449
           G +     Y+ +I    +     E   VF+ M   GC+ +   Y  LID + K G ++ A
Sbjct: 325 GLEIPPHAYSLVIGGLCKDGRTVEGSSVFENMNKKGCKANVAIYTALIDAYGKNGNVNEA 384

Query: 450 MDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIAL 509
           ++++++M+  G  PD  TY VI+N L K+G L  A + F    +     N + Y+ +I  
Sbjct: 385 INLFERMKGEGFEPDDVTYGVIVNGLCKSGRLDEAVEYFEFCKDNEVAVNAMFYSSLIDG 444

Query: 510 QAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPD 569
             KA     A K + +M   G   D   Y+ +++ L   G ++EA  +F  M ++     
Sbjct: 445 LGKAGRVDEAEKFFEEMVERGCPQDSYCYNALIDALAKSGKMEEALVLFKRMEKEGCDQT 504

Query: 570 EPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQ 629
              Y +L+    K     +A + ++ M+  G+ P   +  +L       G+++ A  +L 
Sbjct: 505 VYTYTILISGLFKEHRNEEALKLWDLMIDKGITPTTASFRALSVGLCLSGKVARACKILD 564

Query: 630 GMLNLGLKPSLQTYTLLLSCCTEARS 655
            +  +G+ P      ++   C   R+
Sbjct: 565 ELAPMGVIPETAFEDMINVLCKAGRT 590



 Score = 76.3 bits (186), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 52/192 (27%), Positives = 91/192 (47%), Gaps = 1/192 (0%)

Query: 363 YTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQ 422
           Y++++  LG+A +     K  ++MV  GC  +   YN LI +  ++  + EAL +FK+M+
Sbjct: 438 YSSLIDGLGKAGRVDEAEKFFEEMVERGCPQDSYCYNALIDALAKSGKMEEALVLFKRME 497

Query: 423 VVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQ 482
             GC+    TY  LI    K    + A+ ++  M   G++P T ++  +   L  +G + 
Sbjct: 498 KEGCDQTVYTYTILISGLFKEHRNEEALKLWDLMIDKGITPTTASFRALSVGLCLSGKVA 557

Query: 483 AAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVM 542
            A ++  E+   G IP    +  MI +  KA   + A KL   + + G E      +I++
Sbjct: 558 RACKILDELAPMGVIPE-TAFEDMINVLCKAGRTEQACKLADGIVDRGREVPGRVRTILI 616

Query: 543 EVLGHCGYLDEA 554
             L   G  D A
Sbjct: 617 NALRKAGNADLA 628


>gi|229914885|gb|ACQ90610.1| putative PPR repeat protein [Eutrema halophilum]
          Length = 1023

 Score =  154 bits (388), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 95/311 (30%), Positives = 151/311 (48%), Gaps = 18/311 (5%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMV------------------RDGCQPNVV 396
           GFKH   +Y  +  IL  AR +   N++L +MV                  R+ C P   
Sbjct: 5   GFKHTIESYCIVAHILFCARMYYDANRILREMVLSKAELKDCDVFDVLWSTRNVCVPGFG 64

Query: 397 TYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKM 456
            ++ L       +   EAL  F +M+     P   +   L+   A+ G  D     +K M
Sbjct: 65  VFDALFSVLIEEDMFEEALQCFSKMKRCRVFPKTRSCNGLLHKFARLGKTDGMKRFFKDM 124

Query: 457 QAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNY 516
             AG  P  FTY+++I+C+ K G ++AA  LF EM  +G IP+ VTYN MI    K    
Sbjct: 125 IGAGSKPTVFTYNIMIDCMCKEGDIEAASGLFEEMKFRGLIPDTVTYNSMIDGYGKVGRL 184

Query: 517 QSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLL 576
              +  + +M++   EPD +TY+ ++      G L +    F EM++    P+   Y  L
Sbjct: 185 DDTVYFFEEMKSMSCEPDVITYNTLINCFCKFGKLPKGLEFFREMKQSGLKPNVVSYSTL 244

Query: 577 VDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGL 636
           VD + K   +++A ++Y  M + GL PN  T  SL+ A+ ++G LSDA+ L   M  +G+
Sbjct: 245 VDAFCKEDMMQQALKFYVDMRRLGLVPNEHTYTSLVDAYCKIGNLSDAFRLADEMSQVGV 304

Query: 637 KPSLQTYTLLL 647
           + ++ TYT L+
Sbjct: 305 EWNVVTYTALI 315



 Score =  152 bits (385), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 100/392 (25%), Positives = 187/392 (47%), Gaps = 1/392 (0%)

Query: 354 AGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNE 413
           AG K    TY  M+  + +     A + L ++M   G  P+ VTYN +I  YG+   L++
Sbjct: 127 AGSKPTVFTYNIMIDCMCKEGDIEAASGLFEEMKFRGLIPDTVTYNSMIDGYGKVGRLDD 186

Query: 414 ALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIIN 473
            +  F++M+ + CEPD +TY TLI+   K G L   ++ +++M+ +GL P+  +YS +++
Sbjct: 187 TVYFFEEMKSMSCEPDVITYNTLINCFCKFGKLPKGLEFFREMKQSGLKPNVVSYSTLVD 246

Query: 474 CLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEP 533
              K   +Q A + + +M   G +PN  TY  ++    K  N   A +L  +M   G E 
Sbjct: 247 AFCKEDMMQQALKFYVDMRRLGLVPNEHTYTSLVDAYCKIGNLSDAFRLADEMSQVGVEW 306

Query: 534 DKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWY 593
           + VTY+ +++ L     + EAE +F +M     +P+   Y  L+  + KA N+ +A E  
Sbjct: 307 NVVTYTALIDGLCDVERIKEAEELFGKMVTAGVIPNLASYTALIHGFVKAKNMDRALELL 366

Query: 594 EAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEA 653
           + M   G++P++    + + +   + ++  A  ++  M   G+K +   YT L+    ++
Sbjct: 367 DEMKGRGIKPDLLLYGTFIWSLCGLEKIEAAKVVMNEMQEKGIKANTFIYTTLMDAYFKS 426

Query: 654 RSPYDMGFCHELMAVSGHPAHMFLLSMPSPG-PDGQNVRDHVGSFLEMMHSEDRESKRGL 712
            +P +     E M             +   G    + V   +  F  + +    ++   +
Sbjct: 427 ENPSEGLHLLEEMLELDIEVTAVTFCVLIDGLCKNKLVSKAIDYFGRISNDFGLQANAAI 486

Query: 713 VDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPD 744
             A++D L K    E A +++E  AQK + PD
Sbjct: 487 YTAMIDGLCKEDQVEAATTLFEQMAQKGLVPD 518



 Score =  151 bits (382), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 95/336 (28%), Positives = 161/336 (47%), Gaps = 12/336 (3%)

Query: 328 YQANQVLKQLQDHTVAL---GFFN--WLRRQA---GFKHDEHTYTTMVGILGRARQFGAI 379
           Y AN++L+++      L     F+  W  R     GF      +  +  +L     F   
Sbjct: 27  YDANRILREMVLSKAELKDCDVFDVLWSTRNVCVPGFG----VFDALFSVLIEEDMFEEA 82

Query: 380 NKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDI 439
            +   +M R    P   + N L+H + R    +     FK M   G +P   TY  +ID 
Sbjct: 83  LQCFSKMKRCRVFPKTRSCNGLLHKFARLGKTDGMKRFFKDMIGAGSKPTVFTYNIMIDC 142

Query: 440 HAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPN 499
             K G ++ A  ++++M+  GL PDT TY+ +I+  GK G L      F EM +  C P+
Sbjct: 143 MCKEGDIEAASGLFEEMKFRGLIPDTVTYNSMIDGYGKVGRLDDTVYFFEEMKSMSCEPD 202

Query: 500 LVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFA 559
           ++TYN +I    K       L+ +R+M+ +G +P+ V+YS +++       + +A   + 
Sbjct: 203 VITYNTLINCFCKFGKLPKGLEFFREMKQSGLKPNVVSYSTLVDAFCKEDMMQQALKFYV 262

Query: 560 EMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVG 619
           +MRR   VP+E  Y  LVD + K GN+  A+   + M Q G+  NV T  +L+     V 
Sbjct: 263 DMRRLGLVPNEHTYTSLVDAYCKIGNLSDAFRLADEMSQVGVEWNVVTYTALIDGLCDVE 322

Query: 620 QLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARS 655
           ++ +A  L   M+  G+ P+L +YT L+    +A++
Sbjct: 323 RIKEAEELFGKMVTAGVIPNLASYTALIHGFVKAKN 358



 Score =  148 bits (374), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 86/287 (29%), Positives = 144/287 (50%), Gaps = 4/287 (1%)

Query: 368 GILGRARQFG---AINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVV 424
           G+L +  + G    + +    M+  G +P V TYN +I    +   +  A  +F++M+  
Sbjct: 103 GLLHKFARLGKTDGMKRFFKDMIGAGSKPTVFTYNIMIDCMCKEGDIEAASGLFEEMKFR 162

Query: 425 GCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAA 484
           G  PD VTY ++ID + K G LD  +  +++M++    PD  TY+ +INC  K G L   
Sbjct: 163 GLIPDTVTYNSMIDGYGKVGRLDDTVYFFEEMKSMSCEPDVITYNTLINCFCKFGKLPKG 222

Query: 485 HQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEV 544
            + F EM   G  PN+V+Y+ ++    K    Q ALK Y DM+  G  P++ TY+ +++ 
Sbjct: 223 LEFFREMKQSGLKPNVVSYSTLVDAFCKEDMMQQALKFYVDMRRLGLVPNEHTYTSLVDA 282

Query: 545 LGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPN 604
               G L +A  +  EM +     +   Y  L+D       +++A E +  M+ AG+ PN
Sbjct: 283 YCKIGNLSDAFRLADEMSQVGVEWNVVTYTALIDGLCDVERIKEAEELFGKMVTAGVIPN 342

Query: 605 VPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTY-TLLLSCC 650
           + +  +L+  F++   +  A  LL  M   G+KP L  Y T + S C
Sbjct: 343 LASYTALIHGFVKAKNMDRALELLDEMKGRGIKPDLLLYGTFIWSLC 389



 Score =  103 bits (256), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 128/508 (25%), Positives = 211/508 (41%), Gaps = 52/508 (10%)

Query: 325 MDAYQANQVLKQLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLD 384
           +DA+    +++Q      AL F+  +RR  G   +EHTYT++V    +        +L D
Sbjct: 245 VDAFCKEDMMQQ------ALKFYVDMRR-LGLVPNEHTYTSLVDAYCKIGNLSDAFRLAD 297

Query: 385 QMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAG 444
           +M + G + NVVTY  LI        + EA ++F +M   G  P+  +Y  LI    KA 
Sbjct: 298 EMSQVGVEWNVVTYTALIDGLCDVERIKEAEELFGKMVTAGVIPNLASYTALIHGFVKAK 357

Query: 445 FLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYN 504
            +D A+++  +M+  G+ PD   Y   I  L     ++AA  +  EM  +G   N   Y 
Sbjct: 358 NMDRALELLDEMKGRGIKPDLLLYGTFIWSLCGLEKIEAAKVVMNEMQEKGIKANTFIYT 417

Query: 505 IMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRK 564
            ++    K+ N    L L  +M     E   VT+ ++++ L     + +A   F  +   
Sbjct: 418 TLMDAYFKSENPSEGLHLLEEMLELDIEVTAVTFCVLIDGLCKNKLVSKAIDYFGRISND 477

Query: 565 -NWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSD 623
                +  +Y  ++D   K   V  A   +E M Q GL P+     SL+   L+ G +  
Sbjct: 478 FGLQANAAIYTAMIDGLCKEDQVEAATTLFEQMAQKGLVPDRTAYTSLIDGKLKQGNVVQ 537

Query: 624 AYHLLQGMLNLGLKP-----SLQTYTLLLSCCTEAR---SPYDMGFC--------HELMA 667
           A  L   M  +G++       L   T+ LS    AR     Y++G          ++L +
Sbjct: 538 ALALRDKMAEIGVESGARFGDLCQNTIKLSLRMGARVGVQHYNLGSADSYISSSLNDLNS 597

Query: 668 VSGHPAHMFLLSMPSPGPDGQNVRDHVG-SFLEMMHSEDRESKRGLVDAVVDFLHKSGLK 726
           V G P  +  +   + G DG ++ +  G S  + MH   R S +   D V          
Sbjct: 598 VDGPPRDIDGIG-AAVGRDGDSLDNDGGSSSADCMHESYRNSMQIHNDVV---------- 646

Query: 727 EEAGSVWEVAAQKNVYPDAVKEKGMSYWLINLHVMSDGTAVIA--LSRTLAWFRKQMLIS 784
           EE GS  E              KG +Y ++N+  +S   +     L   L +F  Q +I 
Sbjct: 647 EEGGSNME-------------NKGSAYTMLNVEDVSPIESARGRFLQIILDYFISQHVIE 693

Query: 785 GVGPSRIDIVTGWGRRSRVTGTSLVRQA 812
            V  ++ D  TG G       T + R++
Sbjct: 694 -VCENKRDHETGSGGGQDNNNTKVKRKS 720



 Score = 95.1 bits (235), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 78/306 (25%), Positives = 136/306 (44%), Gaps = 2/306 (0%)

Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLI 402
            L FF  ++ Q+G K +  +Y+T+V    +        K    M R G  PN  TY  L+
Sbjct: 222 GLEFFREMK-QSGLKPNVVSYSTLVDAFCKEDMMQQALKFYVDMRRLGLVPNEHTYTSLV 280

Query: 403 HSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLS 462
            +Y +   L++A  +  +M  VG E + VTY  LID       +  A +++ KM  AG+ 
Sbjct: 281 DAYCKIGNLSDAFRLADEMSQVGVEWNVVTYTALIDGLCDVERIKEAEELFGKMVTAGVI 340

Query: 463 PDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKL 522
           P+  +Y+ +I+   KA ++  A +L  EM  +G  P+L+ Y   I         ++A  +
Sbjct: 341 PNLASYTALIHGFVKAKNMDRALELLDEMKGRGIKPDLLLYGTFIWSLCGLEKIEAAKVV 400

Query: 523 YRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGK 582
             +MQ  G + +   Y+ +M+         E   +  EM   +       + +L+D   K
Sbjct: 401 MNEMQEKGIKANTFIYTTLMDAYFKSENPSEGLHLLEEMLELDIEVTAVTFCVLIDGLCK 460

Query: 583 AGNVRKAWEWYEAMLQA-GLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQ 641
              V KA +++  +    GL+ N     +++    +  Q+  A  L + M   GL P   
Sbjct: 461 NKLVSKAIDYFGRISNDFGLQANAAIYTAMIDGLCKEDQVEAATTLFEQMAQKGLVPDRT 520

Query: 642 TYTLLL 647
            YT L+
Sbjct: 521 AYTSLI 526



 Score = 73.2 bits (178), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 38/171 (22%), Positives = 79/171 (46%), Gaps = 1/171 (0%)

Query: 496 CIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAE 555
           C+P    ++ + ++  +   ++ AL+ +  M+     P   + + ++      G  D  +
Sbjct: 59  CVPGFGVFDALFSVLIEEDMFEEALQCFSKMKRCRVFPKTRSCNGLLHKFARLGKTDGMK 118

Query: 556 AVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAF 615
             F +M      P    Y +++D   K G++  A   +E M   GL P+  T NS++  +
Sbjct: 119 RFFKDMIGAGSKPTVFTYNIMIDCMCKEGDIEAASGLFEEMKFRGLIPDTVTYNSMIDGY 178

Query: 616 LRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSC-CTEARSPYDMGFCHEL 665
            +VG+L D  +  + M ++  +P + TY  L++C C   + P  + F  E+
Sbjct: 179 GKVGRLDDTVYFFEEMKSMSCEPDVITYNTLINCFCKFGKLPKGLEFFREM 229


>gi|356577033|ref|XP_003556634.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39710-like [Glycine max]
          Length = 757

 Score =  154 bits (388), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 86/291 (29%), Positives = 148/291 (50%), Gaps = 11/291 (3%)

Query: 374 RQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTY 433
           R +    ++   MVR+G  PNV TYN +I        L + L   ++M+  G  P+ VTY
Sbjct: 186 RDYDDAERVFRDMVRNGVSPNVYTYNVIIRGVVSQGDLEKGLGFMRKMEKEGISPNVVTY 245

Query: 434 CTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVN 493
            TLID   K   +  AM + + M   G++ +  +Y+ +IN L   G +    +L  EM  
Sbjct: 246 NTLIDASCKKKKVKEAMALLRAMAVGGVAANLISYNSVINGLCGKGRMSEVGELVEEMRG 305

Query: 494 QGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDE 553
           +G +P+ VTYN ++    K  N    L L  +M   G  P+ VTY+ ++  +   G L  
Sbjct: 306 KGLVPDEVTYNTLVNGFCKEGNLHQGLVLLSEMVGKGLSPNVVTYTTLINCMCKAGNLSR 365

Query: 554 AEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLS 613
           A  +F +MR +   P+E  Y  L+D + + G + +A++    M+ +G  P+V T N+L+ 
Sbjct: 366 AVEIFDQMRVRGLRPNERTYTTLIDGFCQKGLMNEAYKVLSEMIVSGFSPSVVTYNALVH 425

Query: 614 AFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGFCHE 664
            +  +G++ +A  +L+GM+  GL P + +Y+ +++           GFC E
Sbjct: 426 GYCFLGRVQEAVGILRGMVERGLPPDVVSYSTVIA-----------GFCRE 465



 Score =  149 bits (377), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 100/315 (31%), Positives = 156/315 (49%), Gaps = 4/315 (1%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           R  G   DE TY T+V    +         LL +MV  G  PNVVTY  LI+   +A  L
Sbjct: 304 RGKGLVPDEVTYNTLVNGFCKEGNLHQGLVLLSEMVGKGLSPNVVTYTTLINCMCKAGNL 363

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
           + A+++F QM+V G  P+  TY TLID   + G ++ A  +  +M  +G SP   TY+ +
Sbjct: 364 SRAVEIFDQMRVRGLRPNERTYTTLIDGFCQKGLMNEAYKVLSEMIVSGFSPSVVTYNAL 423

Query: 472 INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF 531
           ++     G +Q A  +   MV +G  P++V+Y+ +IA   + R    A ++  +M   G 
Sbjct: 424 VHGYCFLGRVQEAVGILRGMVERGLPPDVVSYSTVIAGFCRERELGKAFQMKEEMVEKGV 483

Query: 532 EPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWE 591
            PD VTYS +++ L     L EA  +F EM R+   PDE  Y  L++ +   G + KA  
Sbjct: 484 LPDTVTYSSLIQGLCLQQKLVEAFDLFREMMRRGLPPDEVTYTSLINAYCVDGELSKALR 543

Query: 592 WYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCT 651
            ++ M+Q G  P+  T + L++   +  +   A  LL  +      P   TY  L+  C+
Sbjct: 544 LHDEMVQRGFLPDNVTYSVLINGLNKKARTKVAKRLLLKLFYEESVPDDVTYNTLIENCS 603

Query: 652 --EARSPYDM--GFC 662
             E +S   +  GFC
Sbjct: 604 NNEFKSVEGLVKGFC 618



 Score =  139 bits (350), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 94/330 (28%), Positives = 165/330 (50%), Gaps = 8/330 (2%)

Query: 324 SMDAYQANQVLKQL---QDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAIN 380
           S + Y  N +++ +    D    LGF   + ++ G   +  TY T++    + ++     
Sbjct: 204 SPNVYTYNVIIRGVVSQGDLEKGLGFMRKMEKE-GISPNVVTYNTLIDASCKKKKVKEAM 262

Query: 381 KLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIH 440
            LL  M   G   N+++YN +I+       ++E  ++ ++M+  G  PD VTY TL++  
Sbjct: 263 ALLRAMAVGGVAANLISYNSVINGLCGKGRMSEVGELVEEMRGKGLVPDEVTYNTLVNGF 322

Query: 441 AKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNL 500
            K G L   + +  +M   GLSP+  TY+ +INC+ KAG+L  A ++F +M  +G  PN 
Sbjct: 323 CKEGNLHQGLVLLSEMVGKGLSPNVVTYTTLINCMCKAGNLSRAVEIFDQMRVRGLRPNE 382

Query: 501 VTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHC--GYLDEAEAVF 558
            TY  +I    +      A K+  +M  +GF P  VTY+ +  V G+C  G + EA  + 
Sbjct: 383 RTYTTLIDGFCQKGLMNEAYKVLSEMIVSGFSPSVVTYNAL--VHGYCFLGRVQEAVGIL 440

Query: 559 AEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRV 618
             M  +   PD   Y  ++  + +   + KA++  E M++ G+ P+  T +SL+      
Sbjct: 441 RGMVERGLPPDVVSYSTVIAGFCRERELGKAFQMKEEMVEKGVLPDTVTYSSLIQGLCLQ 500

Query: 619 GQLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
            +L +A+ L + M+  GL P   TYT L++
Sbjct: 501 QKLVEAFDLFREMMRRGLPPDEVTYTSLIN 530



 Score =  133 bits (334), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 96/340 (28%), Positives = 149/340 (43%), Gaps = 51/340 (15%)

Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLI 402
           A+  F+ +R + G + +E TYTT++    +        K+L +M+  G  P+VVTYN L+
Sbjct: 366 AVEIFDQMRVR-GLRPNERTYTTLIDGFCQKGLMNEAYKVLSEMIVSGFSPSVVTYNALV 424

Query: 403 HSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLS 462
           H Y     + EA+ + + M   G  PD V+Y T+I    +   L  A  M ++M   G+ 
Sbjct: 425 HGYCFLGRVQEAVGILRGMVERGLPPDVVSYSTVIAGFCRERELGKAFQMKEEMVEKGVL 484

Query: 463 PDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKL 522
           PDT TYS +I  L     L  A  LF EM+ +G  P+ VTY  +I           AL+L
Sbjct: 485 PDTVTYSSLIQGLCLQQKLVEAFDLFREMMRRGLPPDEVTYTSLINAYCVDGELSKALRL 544

Query: 523 YRDMQNAGFEPDKVTYSIVME--------------------------------------- 543
           + +M   GF PD VTYS+++                                        
Sbjct: 545 HDEMVQRGFLPDNVTYSVLINGLNKKARTKVAKRLLLKLFYEESVPDDVTYNTLIENCSN 604

Query: 544 ---------VLGHC--GYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEW 592
                    V G C  G ++EA+ VF  M ++N  P+  +Y L++    + GNV KA+  
Sbjct: 605 NEFKSVEGLVKGFCMKGLMNEADRVFKTMLQRNHKPNAAIYNLMIHGHSRGGNVHKAYNL 664

Query: 593 YEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGML 632
           Y  +  +    +     +L+ A  R G   +   LLQ +L
Sbjct: 665 YMELEHSSFACHTVAVIALVKALAREGMNDELSRLLQNIL 704



 Score =  108 bits (269), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 78/302 (25%), Positives = 125/302 (41%), Gaps = 50/302 (16%)

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
           + G   D  +Y+T++    R R+ G   ++ ++MV  G  P+ VTY+ LI        L 
Sbjct: 445 ERGLPPDVVSYSTVIAGFCRERELGKAFQMKEEMVEKGVLPDTVTYSSLIQGLCLQQKLV 504

Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
           EA D+F++M   G  PD VTY +LI+ +   G L  A+ ++ +M   G  PD  TYSV+I
Sbjct: 505 EAFDLFREMMRRGLPPDEVTYTSLINAYCVDGELSKALRLHDEMVQRGFLPDNVTYSVLI 564

Query: 473 NCLGKAGHLQAAHQL-------------------------------------FC------ 489
           N L K    + A +L                                     FC      
Sbjct: 565 NGLNKKARTKVAKRLLLKLFYEESVPDDVTYNTLIENCSNNEFKSVEGLVKGFCMKGLMN 624

Query: 490 -------EMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVM 542
                   M+ +   PN   YN+MI   ++  N   A  LY +++++ F    V    ++
Sbjct: 625 EADRVFKTMLQRNHKPNAAIYNLMIHGHSRGGNVHKAYNLYMELEHSSFACHTVAVIALV 684

Query: 543 EVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLR 602
           + L   G  DE   +   + R   + D  V  +LV++  K GN+         M + GL 
Sbjct: 685 KALAREGMNDELSRLLQNILRSCRLNDAKVAKVLVEVNFKEGNMDAVLNVLTEMAKDGLL 744

Query: 603 PN 604
           P+
Sbjct: 745 PD 746



 Score = 46.6 bits (109), Expect = 0.054,   Method: Compositional matrix adjust.
 Identities = 58/259 (22%), Positives = 104/259 (40%), Gaps = 17/259 (6%)

Query: 537 TYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVD--LWGKAGNVRK---AWE 591
            + +V++ L   G++ +A  +     R  + P    Y  ++D  L   + N R    A  
Sbjct: 134 VFDLVVKSLSRLGFVPKALTLLHLANRHGFAPTVLSYNAVLDALLRRSSSNHRDYDDAER 193

Query: 592 WYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTY-TLLLSCC 650
            +  M++ G+ PNV T N ++   +  G L      ++ M   G+ P++ TY TL+ + C
Sbjct: 194 VFRDMVRNGVSPNVYTYNVIIRGVVSQGDLEKGLGFMRKMEKEGISPNVVTYNTLIDASC 253

Query: 651 TEARSPYDMGFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRESKR 710
            + +    M      MAV G  A++   +    G  G+     VG  +E M  +      
Sbjct: 254 KKKKVKEAMALLRA-MAVGGVAANLISYNSVINGLCGKGRMSEVGELVEEMRGKGLVPDE 312

Query: 711 GLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAVKEKGMSYWLINLHVMSDGTAVIAL 770
              + +V+   K G   +   +      K + P+ V        LIN    +       L
Sbjct: 313 VTYNTLVNGFCKEGNLHQGLVLLSEMVGKGLSPNVVTYT----TLINCMCKAGN-----L 363

Query: 771 SRTLAWFRKQMLISGVGPS 789
           SR +  F  QM + G+ P+
Sbjct: 364 SRAVEIF-DQMRVRGLRPN 381


>gi|193806393|sp|P0C7Q7.1|PPR38_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial; Flags: Precursor
          Length = 602

 Score =  154 bits (388), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 87/297 (29%), Positives = 158/297 (53%), Gaps = 4/297 (1%)

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
           + G++ D  T+ T++  L    +      L+D+MV +GCQP+VVTYN +++   R+   +
Sbjct: 151 KLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTS 210

Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
            ALD+ ++M+    + D  TY T+ID   + G +D A+ ++K+M+  G+     TY+ ++
Sbjct: 211 LALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLV 270

Query: 473 NCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFE 532
             L KAG       L  +MV++  +PN++T+N+++ +  K    Q A +LY++M   G  
Sbjct: 271 RGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGIS 330

Query: 533 PDKVTYSIVMEVLGHC--GYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAW 590
           P+ +TY+ +M+  G+C    L EA  +   M R    PD   +  L+  +     V    
Sbjct: 331 PNIITYNTLMD--GYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGM 388

Query: 591 EWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
           + +  + + GL  N  T + L+  F + G++  A  L Q M++ G+ P + TY +LL
Sbjct: 389 KVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILL 445



 Score =  135 bits (340), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 81/309 (26%), Positives = 154/309 (49%), Gaps = 11/309 (3%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           G  H+ +T   M+    R  +      +L ++++ G +P+  T+N LI        ++EA
Sbjct: 118 GIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEA 177

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
           + +  +M   GC+PD VTY ++++   ++G   +A+D+ +KM+   +  D FTYS II+ 
Sbjct: 178 VVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDS 237

Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPD 534
           L + G + AA  LF EM  +G   ++VTYN ++    KA  +     L +DM +    P+
Sbjct: 238 LCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPN 297

Query: 535 KVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYE 594
            +T++++++V    G L EA  ++ EM  +   P+   Y  L+D +     + +A    +
Sbjct: 298 VITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLD 357

Query: 595 AMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEAR 654
            M++    P++ T  SL+  +  V ++ D   + + +   GL  +  TY++L+       
Sbjct: 358 LMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQ------ 411

Query: 655 SPYDMGFCH 663
                GFC 
Sbjct: 412 -----GFCQ 415



 Score =  133 bits (334), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 74/275 (26%), Positives = 144/275 (52%)

Query: 362 TYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQM 421
           T+  ++ +  +  +    N+L  +M+  G  PN++TYN L+  Y   N L+EA ++   M
Sbjct: 300 TFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLM 359

Query: 422 QVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHL 481
               C PD VT+ +LI  +     +D  M +++ +   GL  +  TYS+++    ++G +
Sbjct: 360 VRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKI 419

Query: 482 QAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIV 541
           + A +LF EMV+ G +P+++TY I++         + AL+++ D+Q +  +   V Y+ +
Sbjct: 420 KLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTI 479

Query: 542 MEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGL 601
           +E +   G +++A  +F  +  K   P+   Y +++    K G++ +A      M + G 
Sbjct: 480 IEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGN 539

Query: 602 RPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGL 636
            PN  T N+L+ A LR G L+ +  L++ M + G 
Sbjct: 540 APNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGF 574



 Score =  129 bits (323), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 89/329 (27%), Positives = 164/329 (49%), Gaps = 4/329 (1%)

Query: 322 NYSMDAYQANQVLKQL-QDHTV--ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGA 378
           N   D +  + ++  L +D  +  A+  F  +  + G K    TY ++V  L +A ++  
Sbjct: 223 NVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETK-GIKSSVVTYNSLVRGLCKAGKWND 281

Query: 379 INKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLID 438
              LL  MV     PNV+T+N L+  + +   L EA +++K+M   G  P+ +TY TL+D
Sbjct: 282 GALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMD 341

Query: 439 IHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIP 498
            +     L  A +M   M     SPD  T++ +I        +    ++F  +  +G + 
Sbjct: 342 GYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVA 401

Query: 499 NLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVF 558
           N VTY+I++    ++   + A +L+++M + G  PD +TY I+++ L   G L++A  +F
Sbjct: 402 NAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIF 461

Query: 559 AEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRV 618
            ++++        +Y  +++   K G V  AW  + ++   G++PNV T   ++S   + 
Sbjct: 462 EDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKK 521

Query: 619 GQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
           G LS+A  LL+ M   G  P+  TY  L+
Sbjct: 522 GSLSEANILLRKMEEDGNAPNDCTYNTLI 550



 Score =  121 bits (303), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 72/278 (25%), Positives = 140/278 (50%)

Query: 370 LGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPD 429
           + R +QF  +     Q+  +G   N+ T N +I+ + R      A  V  ++  +G EPD
Sbjct: 98  IARTKQFNLVLDFCKQLELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPD 157

Query: 430 RVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFC 489
             T+ TLI      G +  A+ +  +M   G  PD  TY+ I+N + ++G    A  L  
Sbjct: 158 TTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLR 217

Query: 490 EMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCG 549
           +M  +    ++ TY+ +I    +     +A+ L+++M+  G +   VTY+ ++  L   G
Sbjct: 218 KMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAG 277

Query: 550 YLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCN 609
             ++   +  +M  +  VP+   + +L+D++ K G +++A E Y+ M+  G+ PN+ T N
Sbjct: 278 KWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYN 337

Query: 610 SLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
           +L+  +    +LS+A ++L  M+     P + T+T L+
Sbjct: 338 TLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLI 375



 Score =  120 bits (301), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 98/377 (25%), Positives = 162/377 (42%), Gaps = 24/377 (6%)

Query: 382 LLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHA 441
           L  +M+R    P++V ++R   +  R    N  LD  KQ+++ G   +  T   +I+   
Sbjct: 75  LFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMINCFC 134

Query: 442 KAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLV 501
           +      A  +  K+   G  PDT T++ +I  L   G +  A  L   MV  GC P++V
Sbjct: 135 RCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVV 194

Query: 502 TYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEM 561
           TYN ++    ++ +   AL L R M+    + D  TYS +++ L   G +D A ++F EM
Sbjct: 195 TYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEM 254

Query: 562 RRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQL 621
             K        Y  LV    KAG         + M+   + PNV T N LL  F++ G+L
Sbjct: 255 ETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKL 314

Query: 622 SDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGFCHELMAVSGHPAHMFLLSMP 681
            +A  L + M+  G+ P++ TY  L+            G+C +   +S     + L+   
Sbjct: 315 QEANELYKEMITRGISPNIITYNTLMD-----------GYCMQ-NRLSEANNMLDLMVRN 362

Query: 682 SPGPDGQNVRDHVGSFLEMMHSED------RESKRGLVDAVVDF------LHKSGLKEEA 729
              PD       +  +  +   +D        SKRGLV   V +        +SG  + A
Sbjct: 363 KCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLA 422

Query: 730 GSVWEVAAQKNVYPDAV 746
             +++      V PD +
Sbjct: 423 EELFQEMVSHGVLPDVM 439



 Score =  107 bits (268), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 62/264 (23%), Positives = 127/264 (48%), Gaps = 1/264 (0%)

Query: 362 TYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQM 421
           TY T++       +    N +LD MVR+ C P++VT+  LI  Y     +++ + VF+ +
Sbjct: 335 TYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNI 394

Query: 422 QVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHL 481
              G   + VTY  L+    ++G + +A +++++M + G+ PD  TY ++++ L   G L
Sbjct: 395 SKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKL 454

Query: 482 QAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIV 541
           + A ++F ++        +V Y  +I    K    + A  L+  +   G +P+ +TY+++
Sbjct: 455 EKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVM 514

Query: 542 MEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGL 601
           +  L   G L EA  +  +M      P++  Y  L+    + G++  + +  E M   G 
Sbjct: 515 ISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGF 574

Query: 602 RPNVPTCNSLLSAFLRVGQLSDAY 625
             +  +   ++   L  G+L  ++
Sbjct: 575 SADASSIKMVIDMLLS-GELDKSF 597



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 49/236 (20%), Positives = 102/236 (43%), Gaps = 35/236 (14%)

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
           ++A+ +F++M      P  V +       A+    ++ +D  K+++  G++ + +T +++
Sbjct: 70  DDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIM 129

Query: 472 INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF 531
           INC             FC      C      Y+++             +KL       G+
Sbjct: 130 INC-------------FCR-----CCKTCFAYSVL----------GKVMKL-------GY 154

Query: 532 EPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWE 591
           EPD  T++ +++ L   G + EA  +   M      PD   Y  +V+   ++G+   A +
Sbjct: 155 EPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALD 214

Query: 592 WYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
               M +  ++ +V T ++++ +  R G +  A  L + M   G+K S+ TY  L+
Sbjct: 215 LLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLV 270



 Score = 43.9 bits (102), Expect = 0.37,   Method: Compositional matrix adjust.
 Identities = 30/98 (30%), Positives = 45/98 (45%), Gaps = 4/98 (4%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           G K +  TYT M+  L +       N LL +M  DG  PN  TYN LI ++ R   L  +
Sbjct: 503 GVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTAS 562

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDI----HAKAGFLDV 448
             + ++M+  G   D  +   +ID+         FLD+
Sbjct: 563 AKLIEEMKSCGFSADASSIKMVIDMLLSGELDKSFLDM 600


>gi|255549794|ref|XP_002515948.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223544853|gb|EEF46368.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 706

 Score =  154 bits (388), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 72/189 (38%), Positives = 114/189 (60%)

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
           + G   D   Y T+   LGR +Q   +  L ++M  DG  P++ TYN LI S+GRA  + 
Sbjct: 277 EKGINTDTIMYNTVFTALGRLKQISHLYDLYEKMKLDGPLPDIFTYNILISSFGRAGKVY 336

Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
           EA+ +F++++   C+PD ++Y +LI+   K G LD A   +++MQ  GL+PD  TYS +I
Sbjct: 337 EAIKIFEELENSDCKPDIISYNSLINCLGKNGDLDEAHIRFREMQEKGLNPDVVTYSTLI 396

Query: 473 NCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFE 532
            C GK   ++ A +LF EM+ +GC PN+VTYNI++    ++     A+ LY  ++  G  
Sbjct: 397 ECFGKTDKVEMACRLFDEMLAEGCFPNIVTYNILLDCLERSGRTAEAVDLYAKLKQQGLT 456

Query: 533 PDKVTYSIV 541
           PD +TYS++
Sbjct: 457 PDSITYSVL 465



 Score =  136 bits (343), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 87/316 (27%), Positives = 146/316 (46%), Gaps = 32/316 (10%)

Query: 363 YTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTY------------------------ 398
           Y TM+  L  +R       L  +M+   C+PN  TY                        
Sbjct: 150 YNTMIQALANSRMVDKTILLFSKMMEKNCRPNEFTYSVILTLLAAEGQLHKLDKVVELSR 209

Query: 399 ---NRLIHSY-----GRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAM 450
              NR I++Y      +  + +EA  +F  M       DR    ++++    AG    A+
Sbjct: 210 KYMNRSIYAYLVRTLNKLGHASEAHRLFCNMWSYHDRGDRDACLSMLESLCNAGKTVEAI 269

Query: 451 DMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQ 510
           D+  K+   G++ DT  Y+ +   LG+   +   + L+ +M   G +P++ TYNI+I+  
Sbjct: 270 DLLGKIHEKGINTDTIMYNTVFTALGRLKQISHLYDLYEKMKLDGPLPDIFTYNILISSF 329

Query: 511 AKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDE 570
            +A     A+K++ +++N+  +PD ++Y+ ++  LG  G LDEA   F EM+ K   PD 
Sbjct: 330 GRAGKVYEAIKIFEELENSDCKPDIISYNSLINCLGKNGDLDEAHIRFREMQEKGLNPDV 389

Query: 571 PVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQG 630
             Y  L++ +GK   V  A   ++ ML  G  PN+ T N LL    R G+ ++A  L   
Sbjct: 390 VTYSTLIECFGKTDKVEMACRLFDEMLAEGCFPNIVTYNILLDCLERSGRTAEAVDLYAK 449

Query: 631 MLNLGLKPSLQTYTLL 646
           +   GL P   TY++L
Sbjct: 450 LKQQGLTPDSITYSVL 465



 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 92/373 (24%), Positives = 156/373 (41%), Gaps = 68/373 (18%)

Query: 345 GFFNWLR-RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIH 403
           GF  +L  ++ G+  D   +  ++  L + ++     K+ + M +  C+P+  TY  +I 
Sbjct: 61  GFRVYLEMKRKGYTLDIFAFNMLLDALAKDQKVDQAFKVFEDMKKKHCEPDEYTYTIMIR 120

Query: 404 SYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSP 463
             GR   L+E+L +F++M   GC P+ + Y T+I   A +  +D  + ++ KM      P
Sbjct: 121 MTGRIGKLDESLALFEEMLNKGCSPNLIAYNTMIQALANSRMVDKTILLFSKMMEKNCRP 180

Query: 464 DTFTYSVIINCLG--------------------------------KAGHLQAAHQLFCEM 491
           + FTYSVI+  L                                 K GH   AH+LFC M
Sbjct: 181 NEFTYSVILTLLAAEGQLHKLDKVVELSRKYMNRSIYAYLVRTLNKLGHASEAHRLFCNM 240

Query: 492 VN-----------------------------------QGCIPNLVTYNIMIALQAKARNY 516
            +                                   +G   + + YN +     + +  
Sbjct: 241 WSYHDRGDRDACLSMLESLCNAGKTVEAIDLLGKIHEKGINTDTIMYNTVFTALGRLKQI 300

Query: 517 QSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLL 576
                LY  M+  G  PD  TY+I++   G  G + EA  +F E+   +  PD   Y  L
Sbjct: 301 SHLYDLYEKMKLDGPLPDIFTYNILISSFGRAGKVYEAIKIFEELENSDCKPDIISYNSL 360

Query: 577 VDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGL 636
           ++  GK G++ +A   +  M + GL P+V T ++L+  F +  ++  A  L   ML  G 
Sbjct: 361 INCLGKNGDLDEAHIRFREMQEKGLNPDVVTYSTLIECFGKTDKVEMACRLFDEMLAEGC 420

Query: 637 KPSLQTYTLLLSC 649
            P++ TY +LL C
Sbjct: 421 FPNIVTYNILLDC 433



 Score =  120 bits (300), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 96/389 (24%), Positives = 176/389 (45%), Gaps = 14/389 (3%)

Query: 362 TYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQM 421
           T   ++G  G          L+++      + N  TY  L+ +Y R+   +    V+ +M
Sbjct: 12  TVNILIGFFGDGEDLERCIGLIEKW---DLKMNGYTYKCLVQAYLRSCDSDNGFRVYLEM 68

Query: 422 QVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHL 481
           +  G   D   +  L+D  AK   +D A  +++ M+     PD +TY+++I   G+ G L
Sbjct: 69  KRKGYTLDIFAFNMLLDALAKDQKVDQAFKVFEDMKKKHCEPDEYTYTIMIRMTGRIGKL 128

Query: 482 QAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIV 541
             +  LF EM+N+GC PNL+ YN MI   A +R     + L+  M      P++ TYS++
Sbjct: 129 DESLALFEEMLNKGCSPNLIAYNTMIQALANSRMVDKTILLFSKMMEKNCRPNEFTYSVI 188

Query: 542 MEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGL 601
           + +L   G L + + V  E+ RK    +  +Y  LV    K G+  +A   +  M     
Sbjct: 189 LTLLAAEGQLHKLDKV-VELSRK--YMNRSIYAYLVRTLNKLGHASEAHRLFCNMWSYHD 245

Query: 602 RPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGF 661
           R +   C S+L +    G+  +A  LL  +   G+      Y  + +     +    +  
Sbjct: 246 RGDRDACLSMLESLCNAGKTVEAIDLLGKIHEKGINTDTIMYNTVFTALGRLKQISHLYD 305

Query: 662 CHELMAVSGHPAHMFL--LSMPSPGPDGQNVRDHVGSFLEMMHSEDRESKRGLV--DAVV 717
            +E M + G    +F   + + S G  G+ V + +  F E+   E+ + K  ++  ++++
Sbjct: 306 LYEKMKLDGPLPDIFTYNILISSFGRAGK-VYEAIKIFEEL---ENSDCKPDIISYNSLI 361

Query: 718 DFLHKSGLKEEAGSVWEVAAQKNVYPDAV 746
           + L K+G  +EA   +    +K + PD V
Sbjct: 362 NCLGKNGDLDEAHIRFREMQEKGLNPDVV 390



 Score =  108 bits (270), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 81/349 (23%), Positives = 155/349 (44%), Gaps = 41/349 (11%)

Query: 342 VALGFF---NWLRRQAGF------KHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQ 392
           + +GFF     L R  G       K + +TY  +V    R+       ++  +M R G  
Sbjct: 15  ILIGFFGDGEDLERCIGLIEKWDLKMNGYTYKCLVQAYLRSCDSDNGFRVYLEMKRKGYT 74

Query: 393 PNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDM 452
            ++  +N L+ +  +   +++A  VF+ M+   CEPD  TY  +I +  + G LD ++ +
Sbjct: 75  LDIFAFNMLLDALAKDQKVDQAFKVFEDMKKKHCEPDEYTYTIMIRMTGRIGKLDESLAL 134

Query: 453 YKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAK 512
           +++M   G SP+   Y+ +I  L  +  +     LF +M+ + C PN  TY++++ L A 
Sbjct: 135 FEEMLNKGCSPNLIAYNTMIQALANSRMVDKTILLFSKMMEKNCRPNEFTYSVILTLLAA 194

Query: 513 -------------ARNYQS-------------------ALKLYRDMQNAGFEPDKVTYSI 540
                        +R Y +                   A +L+ +M +     D+     
Sbjct: 195 EGQLHKLDKVVELSRKYMNRSIYAYLVRTLNKLGHASEAHRLFCNMWSYHDRGDRDACLS 254

Query: 541 VMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAG 600
           ++E L + G   EA  +  ++  K    D  +Y  +    G+   +   ++ YE M   G
Sbjct: 255 MLESLCNAGKTVEAIDLLGKIHEKGINTDTIMYNTVFTALGRLKQISHLYDLYEKMKLDG 314

Query: 601 LRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSC 649
             P++ T N L+S+F R G++ +A  + + + N   KP + +Y  L++C
Sbjct: 315 PLPDIFTYNILISSFGRAGKVYEAIKIFEELENSDCKPDIISYNSLINC 363



 Score = 63.9 bits (154), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 28/85 (32%), Positives = 49/85 (57%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           ++ G   D  TY+T++   G+  +     +L D+M+ +GC PN+VTYN L+    R+   
Sbjct: 381 QEKGLNPDVVTYSTLIECFGKTDKVEMACRLFDEMLAEGCFPNIVTYNILLDCLERSGRT 440

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTL 436
            EA+D++ +++  G  PD +TY  L
Sbjct: 441 AEAVDLYAKLKQQGLTPDSITYSVL 465


>gi|224078588|ref|XP_002305565.1| predicted protein [Populus trichocarpa]
 gi|222848529|gb|EEE86076.1| predicted protein [Populus trichocarpa]
          Length = 757

 Score =  154 bits (388), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 93/313 (29%), Positives = 159/313 (50%), Gaps = 1/313 (0%)

Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLI 402
           AL F   +  + GF  D++T+  +V  L +        +++D M+R+G  P++ TYN LI
Sbjct: 284 ALRFIEEMSLREGFFPDKYTFNMLVNGLSKTGHVKHALEVMDMMLREGFDPDIYTYNSLI 343

Query: 403 HSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLS 462
               +   ++EA+ V  QM    C P+ VTY T+I    K   ++ A  +   +   G+ 
Sbjct: 344 SGLCKLGEVDEAVKVLNQMIERDCSPNTVTYNTIISTLCKENQVEEATKLALVLTGKGIL 403

Query: 463 PDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKL 522
           PD  TY+ +I  L  + +   A +L+ EM  +GC P+  TYN++I         Q AL L
Sbjct: 404 PDVCTYNSLIQGLCLSRNHTVAMELYKEMKTKGCHPDEFTYNMLIDSLCFRGKLQEALNL 463

Query: 523 YRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGK 582
            ++M+ +G   + +TY+ +++       + EAE +F +M  +    +   Y  L+D   K
Sbjct: 464 LKEMEVSGCARNVITYNTLIDGFCKNKRIAEAEEIFDQMELQGVSRNSVTYNTLIDGLCK 523

Query: 583 AGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQT 642
           +  V +A +  + M+  GLRP+  T NSLL+ F + G +  A  ++Q M + G +P + T
Sbjct: 524 SERVEEASQLMDQMIMEGLRPDKFTYNSLLTYFCKAGDIKKAADIVQTMASDGCEPDIVT 583

Query: 643 Y-TLLLSCCTEAR 654
           Y TL+   C   R
Sbjct: 584 YGTLIAGLCKAGR 596



 Score =  133 bits (335), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 94/305 (30%), Positives = 150/305 (49%), Gaps = 20/305 (6%)

Query: 338 QDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILG-RARQFGAINKLLDQMVRDGCQPNVV 396
           ++HTVA+  +  ++ + G   DE TY  ++  L  R +   A+N LL +M   GC  NV+
Sbjct: 420 RNHTVAMELYKEMKTK-GCHPDEFTYNMLIDSLCFRGKLQEALN-LLKEMEVSGCARNVI 477

Query: 397 TYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKM 456
           TYN LI  + +   + EA ++F QM++ G   + VTY TLID   K+  ++ A  +  +M
Sbjct: 478 TYNTLIDGFCKNKRIAEAEEIFDQMELQGVSRNSVTYNTLIDGLCKSERVEEASQLMDQM 537

Query: 457 QAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNY 516
              GL PD FTY+ ++    KAG ++ A  +   M + GC P++VTY  +IA   KA   
Sbjct: 538 IMEGLRPDKFTYNSLLTYFCKAGDIKKAADIVQTMASDGCEPDIVTYGTLIAGLCKAGRV 597

Query: 517 QSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLL 576
           ++A KL R +Q  G       Y+ V++ L       EA  +F EM  K   PD   Y ++
Sbjct: 598 EAATKLLRTIQMKGINLTPHAYNPVIQALFRRKRSKEAVRLFREMIEKAEAPDAVTYKIV 657

Query: 577 V-DLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLG 635
              L    G + +A ++   ML+ G  P                + S  Y L +G+ +L 
Sbjct: 658 FRGLCQGGGPIGEAVDFVMEMLERGYVP----------------EFSSFYMLAEGLFSLA 701

Query: 636 LKPSL 640
           +  +L
Sbjct: 702 MVGTL 706



 Score =  132 bits (331), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 90/349 (25%), Positives = 150/349 (42%), Gaps = 36/349 (10%)

Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLI 402
           AL   + + R+ GF  D +TY +++  L +  +     K+L+QM+   C PN VTYN +I
Sbjct: 320 ALEVMDMMLRE-GFDPDIYTYNSLISGLCKLGEVDEAVKVLNQMIERDCSPNTVTYNTII 378

Query: 403 HSYGRANYLNEA-----------------------------------LDVFKQMQVVGCE 427
            +  + N + EA                                   ++++K+M+  GC 
Sbjct: 379 STLCKENQVEEATKLALVLTGKGILPDVCTYNSLIQGLCLSRNHTVAMELYKEMKTKGCH 438

Query: 428 PDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQL 487
           PD  TY  LID     G L  A+++ K+M+ +G + +  TY+ +I+   K   +  A ++
Sbjct: 439 PDEFTYNMLIDSLCFRGKLQEALNLLKEMEVSGCARNVITYNTLIDGFCKNKRIAEAEEI 498

Query: 488 FCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGH 547
           F +M  QG   N VTYN +I    K+   + A +L   M   G  PDK TY+ ++     
Sbjct: 499 FDQMELQGVSRNSVTYNTLIDGLCKSERVEEASQLMDQMIMEGLRPDKFTYNSLLTYFCK 558

Query: 548 CGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPT 607
            G + +A  +   M      PD   YG L+    KAG V  A +    +   G+      
Sbjct: 559 AGDIKKAADIVQTMASDGCEPDIVTYGTLIAGLCKAGRVEAATKLLRTIQMKGINLTPHA 618

Query: 608 CNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSP 656
            N ++ A  R  +  +A  L + M+     P   TY ++     +   P
Sbjct: 619 YNPVIQALFRRKRSKEAVRLFREMIEKAEAPDAVTYKIVFRGLCQGGGP 667



 Score =  120 bits (301), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 78/293 (26%), Positives = 141/293 (48%), Gaps = 1/293 (0%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           G   D  TY +++  L  +R      +L  +M   GC P+  TYN LI S      L EA
Sbjct: 401 GILPDVCTYNSLIQGLCLSRNHTVAMELYKEMKTKGCHPDEFTYNMLIDSLCFRGKLQEA 460

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
           L++ K+M+V GC  + +TY TLID   K   +  A +++ +M+  G+S ++ TY+ +I+ 
Sbjct: 461 LNLLKEMEVSGCARNVITYNTLIDGFCKNKRIAEAEEIFDQMELQGVSRNSVTYNTLIDG 520

Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPD 534
           L K+  ++ A QL  +M+ +G  P+  TYN ++    KA + + A  + + M + G EPD
Sbjct: 521 LCKSERVEEASQLMDQMIMEGLRPDKFTYNSLLTYFCKAGDIKKAADIVQTMASDGCEPD 580

Query: 535 KVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYE 594
            VTY  ++  L   G ++ A  +   ++ K        Y  ++    +    ++A   + 
Sbjct: 581 IVTYGTLIAGLCKAGRVEAATKLLRTIQMKGINLTPHAYNPVIQALFRRKRSKEAVRLFR 640

Query: 595 AMLQAGLRPNVPTCNSLLSAFLR-VGQLSDAYHLLQGMLNLGLKPSLQTYTLL 646
            M++    P+  T   +     +  G + +A   +  ML  G  P   ++ +L
Sbjct: 641 EMIEKAEAPDAVTYKIVFRGLCQGGGPIGEAVDFVMEMLERGYVPEFSSFYML 693



 Score =  116 bits (290), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 99/403 (24%), Positives = 179/403 (44%), Gaps = 3/403 (0%)

Query: 344 LGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIH 403
           L F + +  + G   + H Y  ++ +L    +   +      MV  G +P+V T+N LI 
Sbjct: 144 LQFVDAMEVEFGVVANTHFYNFLLNVLVDGNKLKLVEIAHSNMVSRGIRPDVSTFNILIK 203

Query: 404 SYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSP 463
           +  RA+ +  A+ + ++M+  G  PD  T+ T++    + G LD AM + ++M  AG   
Sbjct: 204 ALCRAHQIRPAILLMEEMEDFGLLPDEKTFTTIMQGFIEEGNLDGAMRVKEQMVEAGCVV 263

Query: 464 DTFTYSVIINCLGKAGHLQAAHQLFCEM-VNQGCIPNLVTYNIMIALQAKARNYQSALKL 522
              T +V++N   K G ++ A +   EM + +G  P+  T+N+++   +K  + + AL++
Sbjct: 264 TNVTVNVLVNGFCKEGRIEEALRFIEEMSLREGFFPDKYTFNMLVNGLSKTGHVKHALEV 323

Query: 523 YRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGK 582
              M   GF+PD  TY+ ++  L   G +DEA  V  +M  ++  P+   Y  ++    K
Sbjct: 324 MDMMLREGFDPDIYTYNSLISGLCKLGEVDEAVKVLNQMIERDCSPNTVTYNTIISTLCK 383

Query: 583 AGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQT 642
              V +A +    +   G+ P+V T NSL+         + A  L + M   G  P   T
Sbjct: 384 ENQVEEATKLALVLTGKGILPDVCTYNSLIQGLCLSRNHTVAMELYKEMKTKGCHPDEFT 443

Query: 643 YTLLL-SCCTEARSPYDMGFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMM 701
           Y +L+ S C   +    +    E M VSG   ++   +    G              + M
Sbjct: 444 YNMLIDSLCFRGKLQEALNLLKE-MEVSGCARNVITYNTLIDGFCKNKRIAEAEEIFDQM 502

Query: 702 HSEDRESKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPD 744
             +         + ++D L KS   EEA  + +    + + PD
Sbjct: 503 ELQGVSRNSVTYNTLIDGLCKSERVEEASQLMDQMIMEGLRPD 545



 Score =  114 bits (285), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 84/325 (25%), Positives = 157/325 (48%), Gaps = 9/325 (2%)

Query: 334 LKQLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQP 393
           L++ +D +  +  F W  +Q  FK     +  ++  LG+A +F A+  +L +M       
Sbjct: 63  LRREEDSSAVIHLFYWASKQPNFKPSSSIFKEVLHKLGKAGEFDAMKDILKEM---KISL 119

Query: 394 NVVTYNRL---IHSYGRANYLNEALDVFKQMQV-VGCEPDRVTYCTLIDIHAKAGFLDVA 449
           +V+  + L   I SY      NE L     M+V  G   +   Y  L+++      L + 
Sbjct: 120 SVIDNDSLLVFIESYASFGLYNEILQFVDAMEVEFGVVANTHFYNFLLNVLVDGNKLKLV 179

Query: 450 MDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIAL 509
              +  M + G+ PD  T++++I  L +A  ++ A  L  EM + G +P+  T+  ++  
Sbjct: 180 EIAHSNMVSRGIRPDVSTFNILIKALCRAHQIRPAILLMEEMEDFGLLPDEKTFTTIMQG 239

Query: 510 QAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMR-RKNWVP 568
             +  N   A+++   M  AG     VT ++++      G ++EA     EM  R+ + P
Sbjct: 240 FIEEGNLDGAMRVKEQMVEAGCVVTNVTVNVLVNGFCKEGRIEEALRFIEEMSLREGFFP 299

Query: 569 DEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLL 628
           D+  + +LV+   K G+V+ A E  + ML+ G  P++ T NSL+S   ++G++ +A  +L
Sbjct: 300 DKYTFNMLVNGLSKTGHVKHALEVMDMMLREGFDPDIYTYNSLISGLCKLGEVDEAVKVL 359

Query: 629 QGMLNLGLKPSLQTY-TLLLSCCTE 652
             M+     P+  TY T++ + C E
Sbjct: 360 NQMIERDCSPNTVTYNTIISTLCKE 384



 Score = 56.6 bits (135), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 60/288 (20%), Positives = 111/288 (38%), Gaps = 2/288 (0%)

Query: 461 LSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSAL 520
             P +  +  +++ LGKAG   A   +  EM     + +  +  + I   A    Y   L
Sbjct: 85  FKPSSSIFKEVLHKLGKAGEFDAMKDILKEMKISLSVIDNDSLLVFIESYASFGLYNEIL 144

Query: 521 KLYRDMQ-NAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDL 579
           +    M+   G   +   Y+ ++ VL     L   E   + M  +   PD   + +L+  
Sbjct: 145 QFVDAMEVEFGVVANTHFYNFLLNVLVDGNKLKLVEIAHSNMVSRGIRPDVSTFNILIKA 204

Query: 580 WGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLG-LKP 638
             +A  +R A    E M   GL P+  T  +++  F+  G L  A  + + M+  G +  
Sbjct: 205 LCRAHQIRPAILLMEEMEDFGLLPDEKTFTTIMQGFIEEGNLDGAMRVKEQMVEAGCVVT 264

Query: 639 SLQTYTLLLSCCTEARSPYDMGFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFL 698
           ++    L+   C E R    + F  E+    G     +  +M   G        H    +
Sbjct: 265 NVTVNVLVNGFCKEGRIEEALRFIEEMSLREGFFPDKYTFNMLVNGLSKTGHVKHALEVM 324

Query: 699 EMMHSEDRESKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAV 746
           +MM  E  +      ++++  L K G  +EA  V     +++  P+ V
Sbjct: 325 DMMLREGFDPDIYTYNSLISGLCKLGEVDEAVKVLNQMIERDCSPNTV 372


>gi|147812173|emb|CAN61517.1| hypothetical protein VITISV_033966 [Vitis vinifera]
          Length = 635

 Score =  154 bits (388), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 91/316 (28%), Positives = 161/316 (50%), Gaps = 2/316 (0%)

Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRD-GCQPNVVTYNRL 401
           A+ +F W  +++G K    T+ T++   G A +     KLL+ M +D   +PN+ TYN L
Sbjct: 161 AMKYF-WKMKESGSKPTTSTFNTLIKGYGIAGEPEESQKLLZLMSQDENVRPNLRTYNVL 219

Query: 402 IHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGL 461
           + ++     + +A +V  +M   G +PD VTY T+   +A+ G    A  +  +MQ + +
Sbjct: 220 VRAWCNKXNIMKAWNVVYKMVASGLQPDAVTYNTIATAYAQNGEASQAEGIILEMQNSNV 279

Query: 462 SPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALK 521
            P+  T  +II    K G ++ A Q    M + G  PNLV +N +I     A +     +
Sbjct: 280 QPNERTCCIIIGGYCKEGKIKEALQFVYRMKDLGLQPNLVVFNSLIKGFIDAVDRDGVNE 339

Query: 522 LYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWG 581
           +   M+  G +PD +T+S +M      G++D+   +F +M +    PD  VY +L   + 
Sbjct: 340 VLTLMEEFGVKPDVITFSTIMNAWSAAGFMDKCREIFDDMVKARIQPDAHVYSILAKGYV 399

Query: 582 KAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQ 641
           +AG   KA E   AM+++G  PNV    ++++ +   G++  A  + + M   G+ P+L+
Sbjct: 400 RAGEPEKAEEILNAMIKSGFHPNVVMFTTIINGWCSAGRMEYAIKIFEKMCECGIAPNLK 459

Query: 642 TYTLLLSCCTEARSPY 657
           T+  L+    EAR P+
Sbjct: 460 TFETLIWGYGEARQPW 475



 Score =  132 bits (331), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 73/291 (25%), Positives = 144/291 (49%), Gaps = 1/291 (0%)

Query: 364 TTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQV 423
           T ++ I+    +   +  +LD ++  G +P++VTY  L+ +     + +    +  Q++ 
Sbjct: 76  TKLMNIMIEKGRPQEVQSILDSIIEGGHKPSLVTYTTLLAALTIQKHFDSIHSIISQVEE 135

Query: 424 VGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQA 483
            G EPD + +  +I+  +++G +  AM  + KM+ +G  P T T++ +I   G AG  + 
Sbjct: 136 NGMEPDSIFFNAVINAFSESGNMQEAMKYFWKMKESGSKPTTSTFNTLIKGYGIAGEPEE 195

Query: 484 AHQLFCEMV-NQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVM 542
           + +L   M  ++   PNL TYN+++       N   A  +   M  +G +PD VTY+ + 
Sbjct: 196 SQKLLZLMSQDENVRPNLRTYNVLVRAWCNKXNIMKAWNVVYKMVASGLQPDAVTYNTIA 255

Query: 543 EVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLR 602
                 G   +AE +  EM+  N  P+E    +++  + K G +++A ++   M   GL+
Sbjct: 256 TAYAQNGEASQAEGIILEMQNSNVQPNERTCCIIIGGYCKEGKIKEALQFVYRMKDLGLQ 315

Query: 603 PNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEA 653
           PN+   NSL+  F+          +L  M   G+KP + T++ +++  + A
Sbjct: 316 PNLVVFNSLIKGFIDAVDRDGVNEVLTLMEEFGVKPDVITFSTIMNAWSAA 366



 Score = 95.1 bits (235), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 61/264 (23%), Positives = 120/264 (45%), Gaps = 14/264 (5%)

Query: 326 DAYQANQVLKQLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQ 385
           +A QA  ++ ++Q+  V              + +E T   ++G   +  +     + + +
Sbjct: 263 EASQAEGIILEMQNSNV--------------QPNERTCCIIIGGYCKEGKIKEALQFVYR 308

Query: 386 MVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGF 445
           M   G QPN+V +N LI  +  A   +   +V   M+  G +PD +T+ T+++  + AGF
Sbjct: 309 MKDLGLQPNLVVFNSLIKGFIDAVDRDGVNEVLTLMEEFGVKPDVITFSTIMNAWSAAGF 368

Query: 446 LDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNI 505
           +D   +++  M  A + PD   YS++     +AG  + A ++   M+  G  PN+V +  
Sbjct: 369 MDKCREIFDDMVKARIQPDAHVYSILAKGYVRAGEPEKAEEILNAMIKSGFHPNVVMFTT 428

Query: 506 MIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKN 565
           +I     A   + A+K++  M   G  P+  T+  ++   G      ++E V   M   N
Sbjct: 429 IINGWCSAGRMEYAIKIFEKMCECGIAPNLKTFETLIWGYGEARQPWKSEEVLQIMEEFN 488

Query: 566 WVPDEPVYGLLVDLWGKAGNVRKA 589
             P++    L+ + W   G  ++A
Sbjct: 489 VQPEKTTLLLVAEAWRATGLKKEA 512



 Score = 90.9 bits (224), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 64/280 (22%), Positives = 124/280 (44%)

Query: 354 AGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNE 413
           +G + D  TY T+     +  +      ++ +M     QPN  T   +I  Y +   + E
Sbjct: 242 SGLQPDAVTYNTIATAYAQNGEASQAEGIILEMQNSNVQPNERTCCIIIGGYCKEGKIKE 301

Query: 414 ALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIIN 473
           AL    +M+ +G +P+ V + +LI     A   D   ++   M+  G+ PD  T+S I+N
Sbjct: 302 ALQFVYRMKDLGLQPNLVVFNSLIKGFIDAVDRDGVNEVLTLMEEFGVKPDVITFSTIMN 361

Query: 474 CLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEP 533
               AG +    ++F +MV     P+   Y+I+     +A   + A ++   M  +GF P
Sbjct: 362 AWSAAGFMDKCREIFDDMVKARIQPDAHVYSILAKGYVRAGEPEKAEEILNAMIKSGFHP 421

Query: 534 DKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWY 593
           + V ++ ++      G ++ A  +F +M      P+   +  L+  +G+A    K+ E  
Sbjct: 422 NVVMFTTIINGWCSAGRMEYAIKIFEKMCECGIAPNLKTFETLIWGYGEARQPWKSEEVL 481

Query: 594 EAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLN 633
           + M +  ++P   T   +  A+   G   +A  +L  + N
Sbjct: 482 QIMEEFNVQPEKTTLLLVAEAWRATGLKKEANRILSAVKN 521



 Score = 85.5 bits (210), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 48/218 (22%), Positives = 106/218 (48%)

Query: 347 FNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYG 406
           F +  +  G + +   + +++     A     +N++L  M   G +P+V+T++ +++++ 
Sbjct: 305 FVYRMKDLGLQPNLVVFNSLIKGFIDAVDRDGVNEVLTLMEEFGVKPDVITFSTIMNAWS 364

Query: 407 RANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTF 466
            A ++++  ++F  M     +PD   Y  L   + +AG  + A ++   M  +G  P+  
Sbjct: 365 AAGFMDKCREIFDDMVKARIQPDAHVYSILAKGYVRAGEPEKAEEILNAMIKSGFHPNVV 424

Query: 467 TYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDM 526
            ++ IIN    AG ++ A ++F +M   G  PNL T+  +I    +AR    + ++ + M
Sbjct: 425 MFTTIINGWCSAGRMEYAIKIFEKMCECGIAPNLKTFETLIWGYGEARQPWKSEEVLQIM 484

Query: 527 QNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRK 564
           +    +P+K T  +V E     G   EA  + + ++ +
Sbjct: 485 EEFNVQPEKTTLLLVAEAWRATGLKKEANRILSAVKNE 522


>gi|357130030|ref|XP_003566661.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
           distachyon]
          Length = 827

 Score =  154 bits (388), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 122/467 (26%), Positives = 225/467 (48%), Gaps = 23/467 (4%)

Query: 359 DEHTYTTMV-GILGRARQFGAINKLLDQMVRDG--CQPNVVTYNRLIHSYGRANYLNEAL 415
           D  +Y T++  + G +R   A++ ++ +M ++G  C P+VV++N +IH + +   +++A 
Sbjct: 194 DAISYNTVIKSLCGDSRSQEALD-MVQRMAKEGGRCSPDVVSFNTVIHGFFKQGEVSKAC 252

Query: 416 DVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCL 475
           ++F +M   G  PD  TY +++D   KA  +D A  + ++M   G+ PD  TY+ II+  
Sbjct: 253 NLFNEMVQKGVVPDVGTYNSIVDALCKARAMDKAEFVLRQMVDKGVEPDGVTYNAIIHGY 312

Query: 476 GKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDK 535
             +GH + + ++F +M ++G IP+ VT++  ++   K    + A ++++ M   G  PD 
Sbjct: 313 SCSGHWKESAKMFRKMTSKGLIPDTVTFSSFMSSLCKHGRSKDAEEIFQYMTTKGHMPDI 372

Query: 536 VTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEA 595
           V+YSI++      G   +   +F  M  K  V +     +L+    K G + +A   +  
Sbjct: 373 VSYSILLHGYATEGRFADMNNLFHSMADKGIVSNCHCINILISAHAKRGMMDEAMLVFTE 432

Query: 596 MLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTY-TLLLSCCTEAR 654
           M   G+RPNV T ++L+SAF R+G+L+DA      M+++G++P+   Y +L+   C    
Sbjct: 433 MQGQGVRPNVVTYSTLISAFCRMGRLADAMEKFSQMISIGIEPNTAVYHSLIHGFCMHGD 492

Query: 655 SPYDMGFCHELMAVSGH-PAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRESKRGLV 713
                 F  E+M+   H P  +F  S+         V D    F  ++H  DR +     
Sbjct: 493 LVKAKEFISEMMSKGLHRPNIVFFSSIIHSLCIEGRVMDAQDVFNLVIHIGDRPTIVTF- 551

Query: 714 DAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAVKEKGMSYWLINLHVMSDGTAVIALSRT 773
           ++++D     G  E+A  V +      + PD V    +         + DG         
Sbjct: 552 NSLIDGYCLVGKMEKAFGVLDAMVSVGIEPDVVTNNTLVSGYCKSGKIDDG--------- 602

Query: 774 LAWFRKQMLISGVGPSRID---IVTGWGRRSRVTGTSLVRQAVQELL 817
           L  FR +ML   V P+ +    ++ G  R  R   TS  ++   E++
Sbjct: 603 LILFR-EMLHKKVKPTTVTYNIVLDGLLRAGR---TSAAKKMFHEMI 645



 Score =  149 bits (377), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 104/393 (26%), Positives = 190/393 (48%), Gaps = 4/393 (1%)

Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLI 402
           A   FN +  Q G   D  TY ++V  L +AR       +L QMV  G +P+ VTYN +I
Sbjct: 251 ACNLFNEMV-QKGVVPDVGTYNSIVDALCKARAMDKAEFVLRQMVDKGVEPDGVTYNAII 309

Query: 403 HSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLS 462
           H Y  + +  E+  +F++M   G  PD VT+ + +    K G    A ++++ M   G  
Sbjct: 310 HGYSCSGHWKESAKMFRKMTSKGLIPDTVTFSSFMSSLCKHGRSKDAEEIFQYMTTKGHM 369

Query: 463 PDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKL 522
           PD  +YS++++     G     + LF  M ++G + N    NI+I+  AK      A+ +
Sbjct: 370 PDIVSYSILLHGYATEGRFADMNNLFHSMADKGIVSNCHCINILISAHAKRGMMDEAMLV 429

Query: 523 YRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGK 582
           + +MQ  G  P+ VTYS ++      G L +A   F++M      P+  VY  L+  +  
Sbjct: 430 FTEMQGQGVRPNVVTYSTLISAFCRMGRLADAMEKFSQMISIGIEPNTAVYHSLIHGFCM 489

Query: 583 AGNVRKAWEWYEAMLQAGL-RPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQ 641
            G++ KA E+   M+  GL RPN+   +S++ +    G++ DA  +   ++++G +P++ 
Sbjct: 490 HGDLVKAKEFISEMMSKGLHRPNIVFFSSIIHSLCIEGRVMDAQDVFNLVIHIGDRPTIV 549

Query: 642 TY-TLLLSCCTEARSPYDMGFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEM 700
           T+ +L+   C   +     G    +++V   P  +   ++ S       + D +  F EM
Sbjct: 550 TFNSLIDGYCLVGKMEKAFGVLDAMVSVGIEPDVVTNNTLVSGYCKSGKIDDGLILFREM 609

Query: 701 MHSEDRESKRGLVDAVVDFLHKSGLKEEAGSVW 733
           +H + + +     + V+D L ++G    A  ++
Sbjct: 610 LHKKVKPTTVTY-NIVLDGLLRAGRTSAAKKMF 641



 Score =  112 bits (279), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 67/267 (25%), Positives = 132/267 (49%)

Query: 382 LLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHA 441
           + + ++  G +P +VT+N LI  Y     + +A  V   M  VG EPD VT  TL+  + 
Sbjct: 535 VFNLVIHIGDRPTIVTFNSLIDGYCLVGKMEKAFGVLDAMVSVGIEPDVVTNNTLVSGYC 594

Query: 442 KAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLV 501
           K+G +D  + ++++M    + P T TY+++++ L +AG   AA ++F EM++ G   ++ 
Sbjct: 595 KSGKIDDGLILFREMLHKKVKPTTVTYNIVLDGLLRAGRTSAAKKMFHEMIDSGTAVDID 654

Query: 502 TYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEM 561
           TY I++    +      A+ L+  +     + D    + ++  L      +EA  +FA +
Sbjct: 655 TYKILLKGLCRNDLTDEAITLFHKLGAMDCKFDITILNTMINALYKVRRREEANDLFAAI 714

Query: 562 RRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQL 621
                VP+   YG+++    K G+V +A   + +M ++G  P+    N ++   L+ G +
Sbjct: 715 STSGLVPNVSTYGVMIRNLLKEGSVEEADTMFSSMEKSGCAPSSRLLNDIIRMLLQKGDI 774

Query: 622 SDAYHLLQGMLNLGLKPSLQTYTLLLS 648
             A + +  +    +     T +LL+S
Sbjct: 775 VKAGYYMSKVDGTIISLEASTTSLLMS 801



 Score =  109 bits (272), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 74/275 (26%), Positives = 137/275 (49%), Gaps = 7/275 (2%)

Query: 366 MVGILGRARQFGAINKLLDQMVRDGC-QPNVVTYNRLIHSYGRANYLNEALDVFKQMQVV 424
           M G L +A++F      + +M+  G  +PN+V ++ +IHS      + +A DVF  +  +
Sbjct: 489 MHGDLVKAKEF------ISEMMSKGLHRPNIVFFSSIIHSLCIEGRVMDAQDVFNLVIHI 542

Query: 425 GCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAA 484
           G  P  VT+ +LID +   G ++ A  +   M + G+ PD  T + +++   K+G +   
Sbjct: 543 GDRPTIVTFNSLIDGYCLVGKMEKAFGVLDAMVSVGIEPDVVTNNTLVSGYCKSGKIDDG 602

Query: 485 HQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEV 544
             LF EM+++   P  VTYNI++    +A    +A K++ +M ++G   D  TY I+++ 
Sbjct: 603 LILFREMLHKKVKPTTVTYNIVLDGLLRAGRTSAAKKMFHEMIDSGTAVDIDTYKILLKG 662

Query: 545 LGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPN 604
           L      DEA  +F ++   +   D  +   +++   K     +A + + A+  +GL PN
Sbjct: 663 LCRNDLTDEAITLFHKLGAMDCKFDITILNTMINALYKVRRREEANDLFAAISTSGLVPN 722

Query: 605 VPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPS 639
           V T   ++   L+ G + +A  +   M   G  PS
Sbjct: 723 VSTYGVMIRNLLKEGSVEEADTMFSSMEKSGCAPS 757



 Score =  107 bits (266), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 73/253 (28%), Positives = 120/253 (47%), Gaps = 5/253 (1%)

Query: 382 LLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHA 441
           +  +M   G +PNVVTY+ LI ++ R   L +A++ F QM  +G EP+   Y +LI    
Sbjct: 429 VFTEMQGQGVRPNVVTYSTLISAFCRMGRLADAMEKFSQMISIGIEPNTAVYHSLIHGFC 488

Query: 442 KAGFLDVAMDMYKKMQAAGL-SPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNL 500
             G L  A +   +M + GL  P+   +S II+ L   G +  A  +F  +++ G  P +
Sbjct: 489 MHGDLVKAKEFISEMMSKGLHRPNIVFFSSIIHSLCIEGRVMDAQDVFNLVIHIGDRPTI 548

Query: 501 VTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHC--GYLDEAEAVF 558
           VT+N +I         + A  +   M + G EPD VT + +  V G+C  G +D+   +F
Sbjct: 549 VTFNSLIDGYCLVGKMEKAFGVLDAMVSVGIEPDVVTNNTL--VSGYCKSGKIDDGLILF 606

Query: 559 AEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRV 618
            EM  K   P    Y +++D   +AG    A + +  M+ +G   ++ T   LL    R 
Sbjct: 607 REMLHKKVKPTTVTYNIVLDGLLRAGRTSAAKKMFHEMIDSGTAVDIDTYKILLKGLCRN 666

Query: 619 GQLSDAYHLLQGM 631
               +A  L   +
Sbjct: 667 DLTDEAITLFHKL 679



 Score = 95.1 bits (235), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 65/255 (25%), Positives = 123/255 (48%), Gaps = 6/255 (2%)

Query: 366 MVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVG 425
           +VG + +A  FG    +LD MV  G +P+VVT N L+  Y ++  +++ L +F++M    
Sbjct: 560 LVGKMEKA--FG----VLDAMVSVGIEPDVVTNNTLVSGYCKSGKIDDGLILFREMLHKK 613

Query: 426 CEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAH 485
            +P  VTY  ++D   +AG    A  M+ +M  +G + D  TY +++  L +      A 
Sbjct: 614 VKPTTVTYNIVLDGLLRAGRTSAAKKMFHEMIDSGTAVDIDTYKILLKGLCRNDLTDEAI 673

Query: 486 QLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVL 545
            LF ++    C  ++   N MI    K R  + A  L+  +  +G  P+  TY +++  L
Sbjct: 674 TLFHKLGAMDCKFDITILNTMINALYKVRRREEANDLFAAISTSGLVPNVSTYGVMIRNL 733

Query: 546 GHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNV 605
              G ++EA+ +F+ M +    P   +   ++ +  + G++ KA  +   +    +    
Sbjct: 734 LKEGSVEEADTMFSSMEKSGCAPSSRLLNDIIRMLLQKGDIVKAGYYMSKVDGTIISLEA 793

Query: 606 PTCNSLLSAFLRVGQ 620
            T + L+S F   G+
Sbjct: 794 STTSLLMSLFSSKGK 808



 Score = 85.1 bits (209), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 91/413 (22%), Positives = 165/413 (39%), Gaps = 19/413 (4%)

Query: 432 TYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHL-QAAHQLFCE 490
           TY  L+D   +A   D+      ++  AGL   T   +  + CL  A    +A   L   
Sbjct: 126 TYGILMDCCCRARRPDLGPAFVARLLRAGLKTGTIQATTFLKCLCHAKRTDEAVDVLLHR 185

Query: 491 MVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAG--FEPDKVTYSIVMEVLGHC 548
           M    C+P+ ++YN +I         Q AL + + M   G    PD V+++ V+      
Sbjct: 186 MSELSCVPDAISYNTVIKSLCGDSRSQEALDMVQRMAKEGGRCSPDVVSFNTVIHGFFKQ 245

Query: 549 GYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTC 608
           G + +A  +F EM +K  VPD   Y  +VD   KA  + KA      M+  G+ P+  T 
Sbjct: 246 GEVSKACNLFNEMVQKGVVPDVGTYNSIVDALCKARAMDKAEFVLRQMVDKGVEPDGVTY 305

Query: 609 NSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTY-TLLLSCCTEARSPYDMGFCHELMA 667
           N+++  +   G   ++  + + M + GL P   T+ + + S C   RS  D     + M 
Sbjct: 306 NAIIHGYSCSGHWKESAKMFRKMTSKGLIPDTVTFSSFMSSLCKHGRSK-DAEEIFQYMT 364

Query: 668 VSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRESKRGLVDAVVDFLHKSGLKE 727
             GH   +   S+   G   +     + +    M  +   S    ++ ++    K G+ +
Sbjct: 365 TKGHMPDIVSYSILLHGYATEGRFADMNNLFHSMADKGIVSNCHCINILISAHAKRGMMD 424

Query: 728 EAGSVWEVAAQKNVYPDAVKEKGMSYWLINLHVMSDGTAVIALSRTLAWFRKQMLISGVG 787
           EA  V+     + V P+ V    +      +  ++D     +          QM+  G+ 
Sbjct: 425 EAMLVFTEMQGQGVRPNVVTYSTLISAFCRMGRLADAMEKFS----------QMISIGIE 474

Query: 788 PSRI---DIVTGWGRRSR-VTGTSLVRQAVQELLHMFSFPFFTENGNSGCFVG 836
           P+      ++ G+      V     + + + + LH  +  FF+   +S C  G
Sbjct: 475 PNTAVYHSLIHGFCMHGDLVKAKEFISEMMSKGLHRPNIVFFSSIIHSLCIEG 527



 Score = 68.9 bits (167), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 48/180 (26%), Positives = 84/180 (46%), Gaps = 10/180 (5%)

Query: 362 TYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQM 421
           TY  ++  L RA +  A  K+  +M+  G   ++ TY  L+    R +  +EA+ +F ++
Sbjct: 620 TYNIVLDGLLRAGRTSAAKKMFHEMIDSGTAVDIDTYKILLKGLCRNDLTDEAITLFHKL 679

Query: 422 QVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHL 481
             + C+ D     T+I+   K    + A D++  +  +GL P+  TY V+I  L K G +
Sbjct: 680 GAMDCKFDITILNTMINALYKVRRREEANDLFAAISTSGLVPNVSTYGVMIRNLLKEGSV 739

Query: 482 QAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIV 541
           + A  +F  M   GC P+    N +I +          L    D+  AG+   KV  +I+
Sbjct: 740 EEADTMFSSMEKSGCAPSSRLLNDIIRM----------LLQKGDIVKAGYYMSKVDGTII 789



 Score = 39.7 bits (91), Expect = 6.5,   Method: Compositional matrix adjust.
 Identities = 34/139 (24%), Positives = 56/139 (40%), Gaps = 7/139 (5%)

Query: 357 KHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALD 416
           K D     TM+  L + R+    N L   +   G  PNV TY  +I +  +   + EA  
Sbjct: 685 KFDITILNTMINALYKVRRREEANDLFAAISTSGLVPNVSTYGVMIRNLLKEGSVEEADT 744

Query: 417 VFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLG 476
           +F  M+  GC P       +I +  + G +  A     K+    +S +  T S++++   
Sbjct: 745 MFSSMEKSGCAPSSRLLNDIIRMLLQKGDIVKAGYYMSKVDGTIISLEASTTSLLMSLFS 804

Query: 477 KAGH-------LQAAHQLF 488
             G        L A +Q F
Sbjct: 805 SKGKHREQIKFLPAKYQFF 823


>gi|255539196|ref|XP_002510663.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223551364|gb|EEF52850.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 695

 Score =  153 bits (387), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 89/319 (27%), Positives = 160/319 (50%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
            ++G   DE TY+ ++     A ++ +   +L +M  +   PN   ++R++ SY      
Sbjct: 353 ERSGVSPDECTYSLLIDAYSNAGRWESARIVLKEMEANNIMPNSYVFSRILASYRDRGEW 412

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
            ++  V K+M+  G  PDR  Y  +ID   K   LD AMD + KM + G+ PDT T++ +
Sbjct: 413 QKSFQVLKEMKNSGVRPDRHFYNVMIDTFGKFSCLDHAMDTFDKMLSEGIQPDTVTWNTL 472

Query: 472 INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF 531
           I+C  KA   + A +LF EM+ +G  P + T+NIMI    +   +     L  +M++ G 
Sbjct: 473 IDCHCKAELHERAEELFEEMMEKGFSPCVTTFNIMINSFGEQERWDDVKTLMGNMRSLGL 532

Query: 532 EPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWE 591
            P+ VTY+ ++++ G  G   +A     +M+     P   +Y  L++ + + G   +A  
Sbjct: 533 LPNVVTYTTLIDIYGKSGRFSDAIECLEDMKSAGLKPSSTMYNALINAYAQKGLSEQAVN 592

Query: 592 WYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCT 651
            +  M    L+P++   NSL++AF    + ++A+ +L+ M    LKP + TYT L+    
Sbjct: 593 AFRLMRADSLKPSLLALNSLINAFGEDRRDAEAFSVLKYMKENDLKPDVVTYTTLMKALI 652

Query: 652 EARSPYDMGFCHELMAVSG 670
                  +   +E M ++G
Sbjct: 653 RVDKFNKVPSVYEEMILAG 671



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 93/351 (26%), Positives = 159/351 (45%), Gaps = 36/351 (10%)

Query: 339 DHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTY 398
           D   A+ F   ++  +G      T   ++  LG + +      + ++M  +G +P    Y
Sbjct: 271 DPNKAMEFLGMVQ-ASGLSPRTATLIAVISALGDSGRIIEAEAIFEEMKDNGLKPKTRAY 329

Query: 399 NRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQA 458
           N L+  Y +A  L +A  +  +M+  G  PD  TY  LID ++ AG  + A  + K+M+A
Sbjct: 330 NGLLKGYVKAGMLKDAEFIVSEMERSGVSPDECTYSLLIDAYSNAGRWESARIVLKEMEA 389

Query: 459 -----------------------------------AGLSPDTFTYSVIINCLGKAGHLQA 483
                                              +G+ PD   Y+V+I+  GK   L  
Sbjct: 390 NNIMPNSYVFSRILASYRDRGEWQKSFQVLKEMKNSGVRPDRHFYNVMIDTFGKFSCLDH 449

Query: 484 AHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVME 543
           A   F +M+++G  P+ VT+N +I    KA  ++ A +L+ +M   GF P   T++I++ 
Sbjct: 450 AMDTFDKMLSEGIQPDTVTWNTLIDCHCKAELHERAEELFEEMMEKGFSPCVTTFNIMIN 509

Query: 544 VLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRP 603
             G     D+ + +   MR    +P+   Y  L+D++GK+G    A E  E M  AGL+P
Sbjct: 510 SFGEQERWDDVKTLMGNMRSLGLLPNVVTYTTLIDIYGKSGRFSDAIECLEDMKSAGLKP 569

Query: 604 NVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEAR 654
           +    N+L++A+ + G    A +  + M    LKPSL     L++   E R
Sbjct: 570 SSTMYNALINAYAQKGLSEQAVNAFRLMRADSLKPSLLALNSLINAFGEDR 620



 Score =  135 bits (339), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 79/283 (27%), Positives = 142/283 (50%), Gaps = 3/283 (1%)

Query: 369 ILGRARQFGAINK---LLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVG 425
           IL   R  G   K   +L +M   G +P+   YN +I ++G+ + L+ A+D F +M   G
Sbjct: 402 ILASYRDRGEWQKSFQVLKEMKNSGVRPDRHFYNVMIDTFGKFSCLDHAMDTFDKMLSEG 461

Query: 426 CEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAH 485
            +PD VT+ TLID H KA   + A +++++M   G SP   T++++IN  G+        
Sbjct: 462 IQPDTVTWNTLIDCHCKAELHERAEELFEEMMEKGFSPCVTTFNIMINSFGEQERWDDVK 521

Query: 486 QLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVL 545
            L   M + G +PN+VTY  +I +  K+  +  A++   DM++AG +P    Y+ ++   
Sbjct: 522 TLMGNMRSLGLLPNVVTYTTLIDIYGKSGRFSDAIECLEDMKSAGLKPSSTMYNALINAY 581

Query: 546 GHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNV 605
              G  ++A   F  MR  +  P       L++ +G+     +A+   + M +  L+P+V
Sbjct: 582 AQKGLSEQAVNAFRLMRADSLKPSLLALNSLINAFGEDRRDAEAFSVLKYMKENDLKPDV 641

Query: 606 PTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
            T  +L+ A +RV + +    + + M+  G  P  +   +L S
Sbjct: 642 VTYTTLMKALIRVDKFNKVPSVYEEMILAGCTPDRKARAMLRS 684



 Score =  135 bits (339), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 95/401 (23%), Positives = 187/401 (46%), Gaps = 10/401 (2%)

Query: 390 GCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVA 449
           G  P   T   +I + G +  + EA  +F++M+  G +P    Y  L+  + KAG L  A
Sbjct: 286 GLSPRTATLIAVISALGDSGRIIEAEAIFEEMKDNGLKPKTRAYNGLLKGYVKAGMLKDA 345

Query: 450 MDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIAL 509
             +  +M+ +G+SPD  TYS++I+    AG  ++A  +  EM     +PN   ++ ++A 
Sbjct: 346 EFIVSEMERSGVSPDECTYSLLIDAYSNAGRWESARIVLKEMEANNIMPNSYVFSRILAS 405

Query: 510 QAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPD 569
                 +Q + ++ ++M+N+G  PD+  Y+++++  G    LD A   F +M  +   PD
Sbjct: 406 YRDRGEWQKSFQVLKEMKNSGVRPDRHFYNVMIDTFGKFSCLDHAMDTFDKMLSEGIQPD 465

Query: 570 EPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQ 629
              +  L+D   KA    +A E +E M++ G  P V T N ++++F    +  D   L+ 
Sbjct: 466 TVTWNTLIDCHCKAELHERAEELFEEMMEKGFSPCVTTFNIMINSFGEQERWDDVKTLMG 525

Query: 630 GMLNLGLKPSLQTYTLLLSCCTEARSPYDMGFCHELMAVSGHPAHMFLLSMPSPGPDGQN 689
            M +LGL P++ TYT L+    ++    D   C E M  +G      + +        + 
Sbjct: 526 NMRSLGLLPNVVTYTTLIDIYGKSGRFSDAIECLEDMKSAGLKPSSTMYNALINAYAQKG 585

Query: 690 VRDHVGSFLEMMHSEDRESKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAVKEK 749
           + +   +   +M ++  +     ++++++   +     EA SV +   + ++ PD V   
Sbjct: 586 LSEQAVNAFRLMRADSLKPSLLALNSLINAFGEDRRDAEAFSVLKYMKENDLKPDVVTYT 645

Query: 750 GMSYWLINLHVMSDGTAVIALSRTLAWFRKQMLISGVGPSR 790
            +   LI +   +   +V           ++M+++G  P R
Sbjct: 646 TLMKALIRVDKFNKVPSVY----------EEMILAGCTPDR 676



 Score =  117 bits (294), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 90/350 (25%), Positives = 156/350 (44%), Gaps = 42/350 (12%)

Query: 342 VALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRL 401
           +A    +WL++       E  Y+ ++  LGR+ +      L  Q       P  +TYN L
Sbjct: 136 LAYAVVSWLQKHNLCFSYELLYSILIHALGRSEKLYEAFLLSQQ---QALSP--LTYNAL 190

Query: 402 IHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLI------------------------ 437
           I++  R N L +A+++  +M+  G   D V Y  +I                        
Sbjct: 191 INACARNNDLEKAINLISRMRQDGYPSDFVNYSLIIQSLVRSNRIDSPILQKLYSEIQCD 250

Query: 438 ----------DI---HAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAA 484
                     DI    AKAG  + AM+    +QA+GLSP T T   +I+ LG +G +  A
Sbjct: 251 KLELDVQLSNDIIVGFAKAGDPNKAMEFLGMVQASGLSPRTATLIAVISALGDSGRIIEA 310

Query: 485 HQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEV 544
             +F EM + G  P    YN ++    KA   + A  +  +M+ +G  PD+ TYS++++ 
Sbjct: 311 EAIFEEMKDNGLKPKTRAYNGLLKGYVKAGMLKDAEFIVSEMERSGVSPDECTYSLLIDA 370

Query: 545 LGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPN 604
             + G  + A  V  EM   N +P+  V+  ++  +   G  +K+++  + M  +G+RP+
Sbjct: 371 YSNAGRWESARIVLKEMEANNIMPNSYVFSRILASYRDRGEWQKSFQVLKEMKNSGVRPD 430

Query: 605 VPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEAR 654
               N ++  F +   L  A      ML+ G++P   T+  L+ C  +A 
Sbjct: 431 RHFYNVMIDTFGKFSCLDHAMDTFDKMLSEGIQPDTVTWNTLIDCHCKAE 480



 Score =  115 bits (289), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 98/423 (23%), Positives = 181/423 (42%), Gaps = 45/423 (10%)

Query: 362 TYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEAL--DVFK 419
           TY  ++    R         L+ +M +DG   + V Y+ +I S  R+N ++  +   ++ 
Sbjct: 186 TYNALINACARNNDLEKAINLISRMRQDGYPSDFVNYSLIIQSLVRSNRIDSPILQKLYS 245

Query: 420 QMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAG 479
           ++Q    E D      +I   AKAG  + AM+    +QA+GLSP T T   +I+ LG +G
Sbjct: 246 EIQCDKLELDVQLSNDIIVGFAKAGDPNKAMEFLGMVQASGLSPRTATLIAVISALGDSG 305

Query: 480 HLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYS 539
            +  A  +F EM + G  P    YN ++    KA   + A  +  +M+ +G  PD+ TYS
Sbjct: 306 RIIEAEAIFEEMKDNGLKPKTRAYNGLLKGYVKAGMLKDAEFIVSEMERSGVSPDECTYS 365

Query: 540 IVMEVLGHCGYLDEAEAVFAEMRRKNWVP------------------------------- 568
           ++++   + G  + A  V  EM   N +P                               
Sbjct: 366 LLIDAYSNAGRWESARIVLKEMEANNIMPNSYVFSRILASYRDRGEWQKSFQVLKEMKNS 425

Query: 569 ----DEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDA 624
               D   Y +++D +GK   +  A + ++ ML  G++P+  T N+L+    +      A
Sbjct: 426 GVRPDRHFYNVMIDTFGKFSCLDHAMDTFDKMLSEGIQPDTVTWNTLIDCHCKAELHERA 485

Query: 625 YHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYD----MGFCHELMAVSGHPAHMFLLSM 680
             L + M+  G  P + T+ ++++   E     D    MG    L  +     +  L+ +
Sbjct: 486 EELFEEMMEKGFSPCVTTFNIMINSFGEQERWDDVKTLMGNMRSLGLLPNVVTYTTLIDI 545

Query: 681 PSPGPDGQNVRDHVGSFLEMMHSEDRESKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKN 740
              G  G+   D +   LE M S   +    + +A+++   + GL E+A + + +    +
Sbjct: 546 --YGKSGR-FSDAIEC-LEDMKSAGLKPSSTMYNALINAYAQKGLSEQAVNAFRLMRADS 601

Query: 741 VYP 743
           + P
Sbjct: 602 LKP 604



 Score =  105 bits (262), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 81/370 (21%), Positives = 160/370 (43%), Gaps = 18/370 (4%)

Query: 237 VQPRSKAHSNRLNSNFKSNLQPSDAKVVECVSERFSKPSREMKIPAGLAPFSRHFASTGN 296
           ++P+++A++  L    K+ +   DA+ +    ER           +G++P    ++   +
Sbjct: 322 LKPKTRAYNGLLKGYVKAGML-KDAEFIVSEMER-----------SGVSPDECTYSLLID 369

Query: 297 VVESVSRILRQWKWGPLAEEALGNTNYSMDAYQANQVLKQLQDHTVALGFFNWLR--RQA 354
              +  R    W+   +  + +   N   ++Y  +++L   +D       F  L+  + +
Sbjct: 370 AYSNAGR----WESARIVLKEMEANNIMPNSYVFSRILASYRDRGEWQKSFQVLKEMKNS 425

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           G + D H Y  M+   G+           D+M+ +G QP+ VT+N LI  + +A     A
Sbjct: 426 GVRPDRHFYNVMIDTFGKFSCLDHAMDTFDKMLSEGIQPDTVTWNTLIDCHCKAELHERA 485

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
            ++F++M   G  P   T+  +I+   +    D    +   M++ GL P+  TY+ +I+ 
Sbjct: 486 EELFEEMMEKGFSPCVTTFNIMINSFGEQERWDDVKTLMGNMRSLGLLPNVVTYTTLIDI 545

Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPD 534
            GK+G    A +   +M + G  P+   YN +I   A+    + A+  +R M+    +P 
Sbjct: 546 YGKSGRFSDAIECLEDMKSAGLKPSSTMYNALINAYAQKGLSEQAVNAFRLMRADSLKPS 605

Query: 535 KVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYE 594
            +  + ++   G      EA +V   M+  +  PD   Y  L+    +     K    YE
Sbjct: 606 LLALNSLINAFGEDRRDAEAFSVLKYMKENDLKPDVVTYTTLMKALIRVDKFNKVPSVYE 665

Query: 595 AMLQAGLRPN 604
            M+ AG  P+
Sbjct: 666 EMILAGCTPD 675



 Score =  105 bits (262), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 61/222 (27%), Positives = 108/222 (48%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           G + D  T+ T++    +A       +L ++M+  G  P V T+N +I+S+G     ++ 
Sbjct: 461 GIQPDTVTWNTLIDCHCKAELHERAEELFEEMMEKGFSPCVTTFNIMINSFGEQERWDDV 520

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
             +   M+ +G  P+ VTY TLIDI+ K+G    A++  + M++AGL P +  Y+ +IN 
Sbjct: 521 KTLMGNMRSLGLLPNVVTYTTLIDIYGKSGRFSDAIECLEDMKSAGLKPSSTMYNALINA 580

Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPD 534
             + G  + A   F  M      P+L+  N +I    + R    A  + + M+    +PD
Sbjct: 581 YAQKGLSEQAVNAFRLMRADSLKPSLLALNSLINAFGEDRRDAEAFSVLKYMKENDLKPD 640

Query: 535 KVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLL 576
            VTY+ +M+ L      ++  +V+ EM      PD     +L
Sbjct: 641 VVTYTTLMKALIRVDKFNKVPSVYEEMILAGCTPDRKARAML 682



 Score = 88.2 bits (217), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 48/195 (24%), Positives = 90/195 (46%)

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
           + GF     T+  M+   G   ++  +  L+  M   G  PNVVTY  LI  YG++   +
Sbjct: 494 EKGFSPCVTTFNIMINSFGEQERWDDVKTLMGNMRSLGLLPNVVTYTTLIDIYGKSGRFS 553

Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
           +A++  + M+  G +P    Y  LI+ +A+ G  + A++ ++ M+A  L P     + +I
Sbjct: 554 DAIECLEDMKSAGLKPSSTMYNALINAYAQKGLSEQAVNAFRLMRADSLKPSLLALNSLI 613

Query: 473 NCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFE 532
           N  G+      A  +   M      P++VTY  ++    +   +     +Y +M  AG  
Sbjct: 614 NAFGEDRRDAEAFSVLKYMKENDLKPDVVTYTTLMKALIRVDKFNKVPSVYEEMILAGCT 673

Query: 533 PDKVTYSIVMEVLGH 547
           PD+   +++   L +
Sbjct: 674 PDRKARAMLRSALKY 688



 Score = 69.3 bits (168), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 54/205 (26%), Positives = 99/205 (48%), Gaps = 7/205 (3%)

Query: 468 YSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQ 527
           YS++I+ LG++  L   ++ F     Q   P  +TYN +I   A+  + + A+ L   M+
Sbjct: 157 YSILIHALGRSEKL---YEAFLLSQQQALSP--LTYNALINACARNNDLEKAINLISRMR 211

Query: 528 NAGFEPDKVTYSIVMEVLGHCGYLDEA--EAVFAEMRRKNWVPDEPVYGLLVDLWGKAGN 585
             G+  D V YS++++ L     +D    + +++E++      D  +   ++  + KAG+
Sbjct: 212 QDGYPSDFVNYSLIIQSLVRSNRIDSPILQKLYSEIQCDKLELDVQLSNDIIVGFAKAGD 271

Query: 586 VRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTL 645
             KA E+   +  +GL P   T  +++SA    G++ +A  + + M + GLKP  + Y  
Sbjct: 272 PNKAMEFLGMVQASGLSPRTATLIAVISALGDSGRIIEAEAIFEEMKDNGLKPKTRAYNG 331

Query: 646 LLSCCTEARSPYDMGFCHELMAVSG 670
           LL    +A    D  F    M  SG
Sbjct: 332 LLKGYVKAGMLKDAEFIVSEMERSG 356



 Score = 44.7 bits (104), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 22/81 (27%), Positives = 38/81 (46%)

Query: 350 LRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRAN 409
           L R    K       +++   G  R+      +L  M  +  +P+VVTY  L+ +  R +
Sbjct: 596 LMRADSLKPSLLALNSLINAFGEDRRDAEAFSVLKYMKENDLKPDVVTYTTLMKALIRVD 655

Query: 410 YLNEALDVFKQMQVVGCEPDR 430
             N+   V+++M + GC PDR
Sbjct: 656 KFNKVPSVYEEMILAGCTPDR 676


>gi|41393251|gb|AAS01974.1| putative chloroplastic RNA-binding protein, with alternative
           splicing isoforms [Oryza sativa Japonica Group]
 gi|108712189|gb|ABF99984.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
          Length = 884

 Score =  153 bits (387), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 123/532 (23%), Positives = 227/532 (42%), Gaps = 27/532 (5%)

Query: 317 ALGNTNYSMDAYQANQVLKQL-------QDHTVALGFFNWLRRQAGFKHDEHTYTTMVGI 369
           AL +  + +D    N  LK L       Q   +AL         +G   D  TY+T++  
Sbjct: 162 ALPDGAFPLDTIVFNVALKSLRAARQWPQAERLALDML-----ASGVPLDNITYSTLITA 216

Query: 370 LGRARQFGAINKLLDQM-VRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEP 428
             R RQF    +  ++M   DG  P+ VTY+ ++  Y +     E L +F + +  G +P
Sbjct: 217 ARRCRQFDKAVEWFERMYASDGVLPDEVTYSAILDVYAQLGMKEEVLALFDRARGSGWKP 276

Query: 429 DRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLF 488
           D V +  L  +  +AG  D    ++K+M+  G+ P+ F Y+ ++  LGK G    A  LF
Sbjct: 277 DHVAFAVLAKMFGEAGDYDGIQFVFKEMREVGIKPNIFVYNALLEALGKTGKPGLARNLF 336

Query: 489 CEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHC 548
            EM  +G  PN  T   +  +  +AR  + AL+L+  M+      D +  + ++ +    
Sbjct: 337 EEMTAEGVEPNARTLTALAKIYGRARWGRDALQLWEQMREKKLPADNILCNTLLSMCADV 396

Query: 549 GYLDEAEAVFAEMRRKNW----VPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPN 604
           G + EAE +F+EM+  +      PD+  Y  +++++G +G+  +A + +  M+++G+ PN
Sbjct: 397 GLVGEAEQLFSEMKDPDLGDVPKPDKWSYTAMINIYGSSGDADRALQLFAEMVESGIEPN 456

Query: 605 VPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGFCHE 664
           + +   ++    + G++ +A  +L+  +  GLKP  +    LLS    +           
Sbjct: 457 IMSYTIVIQCLGKAGRIQEAVDVLEAGMAKGLKPDDRLCGCLLSVVALSSGDETEVILAC 516

Query: 665 LMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRESKRGLVDAVVDFLHKSG 724
           L  V  +   +  +     G     V D       +++S   E +R   + ++D     G
Sbjct: 517 LEKVRSNLVKLIRML----GDARVGVEDLRVELKGILNSAAPEVRRPYCNCLIDICRNHG 572

Query: 725 L-KEEAGSVWEVAAQKNVYPDAVKEKGMSYWLINLHVMSDGTAVIALSRTLAWFRKQMLI 783
              E A  ++ +A    +Y   +  +    W ++L  +S G A  A    +   R+    
Sbjct: 573 YPSERAVELFRLARHYGLY-SKIHTRKEEEWSLDLRSLSVGAAKTAFDDWMKTIREHEEE 631

Query: 784 SGVGPSRIDIVTGWGRRSRVTGTSLVRQAVQELLHMFSFPFFTENGNSGCFV 835
             + P    + TG        G +    AV   L     PF   +   G F+
Sbjct: 632 EAL-PQTFSVYTGSSTHKFAQGLA---TAVASHLEQVGAPFRASDSQLGSFI 679



 Score =  110 bits (275), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 85/332 (25%), Positives = 153/332 (46%), Gaps = 21/332 (6%)

Query: 296 NVVESVSRILRQWKWGPLAEE----------ALGNTNYSMDAYQANQVLKQLQDHTVALG 345
           NV     R  RQW   P AE            L N  YS     A    ++ +    A+ 
Sbjct: 176 NVALKSLRAARQW---PQAERLALDMLASGVPLDNITYSTLITAA----RRCRQFDKAVE 228

Query: 346 FFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSY 405
           +F  +    G   DE TY+ ++ +  +      +  L D+    G +P+ V +  L   +
Sbjct: 229 WFERMYASDGVLPDEVTYSAILDVYAQLGMKEEVLALFDRARGSGWKPDHVAFAVLAKMF 288

Query: 406 GRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDT 465
           G A   +    VFK+M+ VG +P+   Y  L++   K G   +A +++++M A G+ P+ 
Sbjct: 289 GEAGDYDGIQFVFKEMREVGIKPNIFVYNALLEALGKTGKPGLARNLFEEMTAEGVEPNA 348

Query: 466 FTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRD 525
            T + +    G+A   + A QL+ +M  +    + +  N ++++ A       A +L+ +
Sbjct: 349 RTLTALAKIYGRARWGRDALQLWEQMREKKLPADNILCNTLLSMCADVGLVGEAEQLFSE 408

Query: 526 MQNAGF----EPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWG 581
           M++       +PDK +Y+ ++ + G  G  D A  +FAEM      P+   Y +++   G
Sbjct: 409 MKDPDLGDVPKPDKWSYTAMINIYGSSGDADRALQLFAEMVESGIEPNIMSYTIVIQCLG 468

Query: 582 KAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLS 613
           KAG +++A +  EA +  GL+P+   C  LLS
Sbjct: 469 KAGRIQEAVDVLEAGMAKGLKPDDRLCGCLLS 500



 Score = 41.2 bits (95), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 48/241 (19%), Positives = 94/241 (39%), Gaps = 5/241 (2%)

Query: 509 LQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVP 568
           L    R   S L   R + +  F  D + +++ ++ L       +AE +  +M       
Sbjct: 146 LHPSWRKSLSLLCWLRALPDGAFPLDTIVFNVALKSLRAARQWPQAERLALDMLASGVPL 205

Query: 569 DEPVYGLLVDLWGKAGNVRKAWEWYEAMLQA-GLRPNVPTCNSLLSAFLRVGQLSDAYHL 627
           D   Y  L+    +     KA EW+E M  + G+ P+  T +++L  + ++G   +   L
Sbjct: 206 DNITYSTLITAARRCRQFDKAVEWFERMYASDGVLPDEVTYSAILDVYAQLGMKEEVLAL 265

Query: 628 LQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGFCHELMAVSGHPAHMFLLS--MPSPGP 685
                  G KP    + +L     EA     + F  + M   G   ++F+ +  + + G 
Sbjct: 266 FDRARGSGWKPDHVAFAVLAKMFGEAGDYDGIQFVFKEMREVGIKPNIFVYNALLEALGK 325

Query: 686 DGQNVRDHVGSFLEMMHSEDRESKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDA 745
            G+       +  E M +E  E     + A+     ++    +A  +WE   +K +  D 
Sbjct: 326 TGKP--GLARNLFEEMTAEGVEPNARTLTALAKIYGRARWGRDALQLWEQMREKKLPADN 383

Query: 746 V 746
           +
Sbjct: 384 I 384


>gi|357114648|ref|XP_003559110.1| PREDICTED: pentatricopeptide repeat-containing protein At5g46580,
           chloroplastic-like [Brachypodium distachyon]
          Length = 875

 Score =  153 bits (387), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 118/501 (23%), Positives = 215/501 (42%), Gaps = 18/501 (3%)

Query: 354 AGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDG---CQPNVVTYNRLIHSYGRANY 410
           +G   D  TY+T++    R RQF    +  ++M   G     P+ VTY+ ++  Y +   
Sbjct: 200 SGVPLDNITYSTLITAARRCRQFAKAVEWFERMYSPGGGGVLPDEVTYSAVLDVYAQLRM 259

Query: 411 LNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSV 470
             E L +F + +  G +PD V +  L  +  +AG  D    ++++M+  G+ P+ F Y+ 
Sbjct: 260 KEEVLALFDRARGSGWKPDHVAFAVLAKMFGEAGDYDGIQFVFREMREVGIKPNIFVYNA 319

Query: 471 IINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAG 530
           ++  LGK G    A  LF EM  +G  PN  T   +  +  +AR  + AL+L+  M+   
Sbjct: 320 LLEALGKTGKPGLARSLFEEMTAEGVEPNARTLTAVAKIYGRARWGRDALQLWEQMRQKK 379

Query: 531 FEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWV----PDEPVYGLLVDLWGKAGNV 586
              D +  + ++ +    G + EAE +F EM+         PD+  Y  +++++G   + 
Sbjct: 380 IPADSILCNTLLSMCADVGLVAEAEQLFEEMKDPELSDVPKPDKWSYTAMINIYGSIKDA 439

Query: 587 RKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLL 646
            +A + +  ML  G+ PN+ +   ++    +  ++ DA  +L+  L  GLKP  +    L
Sbjct: 440 DRALQLFAEMLAEGIEPNIMSYTIVIQCLGKTNRIQDAAEVLEAGLERGLKPDDRLCGCL 499

Query: 647 LSCCTEARSPYDMGFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLE-MMHSED 705
           LS           G   ELM       +  L+ +     D Q   D +   L+ ++++ D
Sbjct: 500 LSVVA-----LSSGDETELMLACLEKVNRNLVKLIRLLGDAQVGVDELKEELKAVLNAAD 554

Query: 706 RESKRGLVDAVVDFLHKSGLK-EEAGSVWEVAAQKNVYPDAVKEKGMSYWLINLHVMSDG 764
            E +R   + ++D     G     +G ++ +A    +Y   +  +    WL++L  +S G
Sbjct: 555 SEVRRPYCNCLIDICQNHGFPAHRSGELFHLAQHYGLY-SKLHIRKDEEWLLDLRSLSVG 613

Query: 765 TAVIALSRTLAWFRKQMLISGVGPSRIDIVTGWGRRSRVTGTSLVRQAVQELLHMFSFPF 824
            A  A    +    ++       P   ++ TG        G +    A    L   + PF
Sbjct: 614 AAKTAFDDWMKTISERSAQGKPLPEFFNVFTGSSTHKFAQGLA---SAFAVHLEETAVPF 670

Query: 825 FTENGNSGCFVGCGEPLNKWL 845
                  G FV   + L  WL
Sbjct: 671 RPSESQVGSFVSSRDDLVSWL 691



 Score =  102 bits (254), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 61/251 (24%), Positives = 120/251 (47%), Gaps = 5/251 (1%)

Query: 333 VLKQLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQ 392
           V  QL+     L  F+   R +G+K D   +  +  + G A  +  I  +  +M   G +
Sbjct: 253 VYAQLRMKEEVLALFD-RARGSGWKPDHVAFAVLAKMFGEAGDYDGIQFVFREMREVGIK 311

Query: 393 PNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDM 452
           PN+  YN L+ + G+      A  +F++M   G EP+  T   +  I+ +A +   A+ +
Sbjct: 312 PNIFVYNALLEALGKTGKPGLARSLFEEMTAEGVEPNARTLTAVAKIYGRARWGRDALQL 371

Query: 453 YKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEM----VNQGCIPNLVTYNIMIA 508
           +++M+   +  D+   + +++     G +  A QLF EM    ++    P+  +Y  MI 
Sbjct: 372 WEQMRQKKIPADSILCNTLLSMCADVGLVAEAEQLFEEMKDPELSDVPKPDKWSYTAMIN 431

Query: 509 LQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVP 568
           +    ++   AL+L+ +M   G EP+ ++Y+IV++ LG    + +A  V      +   P
Sbjct: 432 IYGSIKDADRALQLFAEMLAEGIEPNIMSYTIVIQCLGKTNRIQDAAEVLEAGLERGLKP 491

Query: 569 DEPVYGLLVDL 579
           D+ + G L+ +
Sbjct: 492 DDRLCGCLLSV 502



 Score = 89.0 bits (219), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 60/223 (26%), Positives = 101/223 (45%), Gaps = 3/223 (1%)

Query: 458 AAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQ 517
           A   + DT  ++V +  L  A       +L  +MV  G   + +TY+ +I    + R + 
Sbjct: 164 ADAFAVDTIFFNVALKSLRAARRWAECERLALDMVASGVPLDNITYSTLITAARRCRQFA 223

Query: 518 SALKLYRDMQN---AGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYG 574
            A++ +  M +    G  PD+VTYS V++V       +E  A+F   R   W PD   + 
Sbjct: 224 KAVEWFERMYSPGGGGVLPDEVTYSAVLDVYAQLRMKEEVLALFDRARGSGWKPDHVAFA 283

Query: 575 LLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNL 634
           +L  ++G+AG+       +  M + G++PN+   N+LL A  + G+   A  L + M   
Sbjct: 284 VLAKMFGEAGDYDGIQFVFREMREVGIKPNIFVYNALLEALGKTGKPGLARSLFEEMTAE 343

Query: 635 GLKPSLQTYTLLLSCCTEARSPYDMGFCHELMAVSGHPAHMFL 677
           G++P+ +T T +      AR   D     E M     PA   L
Sbjct: 344 GVEPNARTLTAVAKIYGRARWGRDALQLWEQMRQKKIPADSIL 386


>gi|115453829|ref|NP_001050515.1| Os03g0569800 [Oryza sativa Japonica Group]
 gi|113548986|dbj|BAF12429.1| Os03g0569800 [Oryza sativa Japonica Group]
          Length = 773

 Score =  153 bits (387), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 98/334 (29%), Positives = 159/334 (47%), Gaps = 2/334 (0%)

Query: 316 EALGNTNYSMDAYQANQVLKQLQDHTVALGFFNWLRRQA--GFKHDEHTYTTMVGILGRA 373
           EA+     ++D    N VL  + +          LR+ A  G + D  +Y  ++  L  A
Sbjct: 170 EAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMA 229

Query: 374 RQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTY 433
           +++G + +L+D+MVR  C PN+VT+N LI    R        +V  QM   GC PD   Y
Sbjct: 230 KRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMY 289

Query: 434 CTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVN 493
            T+ID   K G L+VA ++  +M + GL P+   Y+ ++  L  A   + A +L  EM  
Sbjct: 290 ATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQ 349

Query: 494 QGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDE 553
           + C  + VT+NI++    +       ++L   M + G  PD +TY+ V+      G +DE
Sbjct: 350 KDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDE 409

Query: 554 AEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLS 613
           A  +   M      P+   Y +++     AG    A E    M+Q G  PN  T N+L++
Sbjct: 410 AVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLIN 469

Query: 614 AFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
              + G +  A  LL+ ML  G  P L +Y+ ++
Sbjct: 470 FLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVI 503



 Score =  147 bits (372), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 82/293 (27%), Positives = 150/293 (51%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           G K +   Y T++  L  A ++    +LL +M +  C  + VT+N L+  + +   ++  
Sbjct: 316 GLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRV 375

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
           +++ +QM   GC PD +TY T+I+   K G +D A+ + K M + G  P+T +Y++++  
Sbjct: 376 IELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKG 435

Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPD 534
           L  AG    A +L  +M+ QGC PN VT+N +I    K    + A++L + M   G  PD
Sbjct: 436 LCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPD 495

Query: 535 KVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYE 594
            ++YS V++ LG  G  +EA  +   M  K   P+  +Y  +     + G V K  + ++
Sbjct: 496 LISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQMFD 555

Query: 595 AMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
            +    +R +    N+++S+  +  +   A      M++ G  P+  TYT+L+
Sbjct: 556 NIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTMLI 608



 Score =  133 bits (334), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 82/320 (25%), Positives = 147/320 (45%), Gaps = 14/320 (4%)

Query: 329 QANQVLKQLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVR 388
           + ++VL Q+ +H              G   D   Y T++  + +       N++L++M  
Sbjct: 269 RVHEVLAQMSEH--------------GCTPDIRMYATIIDGICKEGHLEVANEILNRMPS 314

Query: 389 DGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDV 448
            G +PNVV YN ++     A    EA ++  +M    C  D VT+  L+D   + G +D 
Sbjct: 315 YGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDR 374

Query: 449 AMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIA 508
            +++ ++M + G  PD  TY+ +IN   K G +  A  L   M + GC PN V+Y I++ 
Sbjct: 375 VIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLK 434

Query: 509 LQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVP 568
               A  +  A +L   M   G  P+ VT++ ++  L   G +++A  +  +M      P
Sbjct: 435 GLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSP 494

Query: 569 DEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLL 628
           D   Y  ++D  GKAG   +A E    M+  G+ PN    +S+  A  R G+++    + 
Sbjct: 495 DLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQMF 554

Query: 629 QGMLNLGLKPSLQTYTLLLS 648
             + +  ++     Y  ++S
Sbjct: 555 DNIKDTTIRSDAVLYNAVIS 574



 Score =  125 bits (313), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 73/277 (26%), Positives = 136/277 (49%)

Query: 359 DEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVF 418
           D+ T+  +V    +      + +LL+QM+  GC P+V+TY  +I+ + +   ++EA+ + 
Sbjct: 355 DDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLL 414

Query: 419 KQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKA 478
           K M   GC+P+ V+Y  ++     AG    A ++  +M   G  P+  T++ +IN L K 
Sbjct: 415 KSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKK 474

Query: 479 GHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTY 538
           G ++ A +L  +M+  GC P+L++Y+ +I    KA   + AL+L   M N G  P+ + Y
Sbjct: 475 GLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIY 534

Query: 539 SIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQ 598
           S +   L   G +++   +F  ++      D  +Y  ++    K     +A +++  M+ 
Sbjct: 535 SSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVS 594

Query: 599 AGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLG 635
            G  PN  T   L+      G   +A  LL  + + G
Sbjct: 595 NGCMPNESTYTMLIKGLASEGLAKEAQELLSELCSRG 631



 Score =  117 bits (294), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 68/267 (25%), Positives = 130/267 (48%)

Query: 382 LLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHA 441
           LL ++   GC+ ++V+YN ++     A    +  ++  +M  V C P+ VT+ TLI    
Sbjct: 203 LLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLC 262

Query: 442 KAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLV 501
           + G  +   ++  +M   G +PD   Y+ II+ + K GHL+ A+++   M + G  PN+V
Sbjct: 263 RNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVV 322

Query: 502 TYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEM 561
            YN ++     A  ++ A +L  +M       D VT++I+++     G +D    +  +M
Sbjct: 323 CYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQM 382

Query: 562 RRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQL 621
                +PD   Y  +++ + K G + +A    ++M   G +PN  +   +L      G+ 
Sbjct: 383 LSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRW 442

Query: 622 SDAYHLLQGMLNLGLKPSLQTYTLLLS 648
            DA  L+  M+  G  P+  T+  L++
Sbjct: 443 VDAEELMSQMIQQGCPPNPVTFNTLIN 469



 Score =  115 bits (289), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 96/424 (22%), Positives = 178/424 (41%), Gaps = 37/424 (8%)

Query: 359 DEHTYTTMV-GILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDV 417
           + +T+  +V G+  R R   A+ ++LD+M   GC P    Y+ ++ +  R+     ++ V
Sbjct: 110 NAYTFFPVVRGLCTRGRIADAL-EVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRV 168

Query: 418 FKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGK 477
            + M   GC  D      +++   + G +D A+ + +K+   G   D  +Y+ ++  L  
Sbjct: 169 LEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCM 228

Query: 478 AGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVT 537
           A       +L  EMV   C PN+VT+N +I    +   ++   ++   M   G  PD   
Sbjct: 229 AKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRM 288

Query: 538 YSIVMEVLGHCGYLD-----------------------------------EAEAVFAEMR 562
           Y+ +++ +   G+L+                                   EAE + +EM 
Sbjct: 289 YATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMF 348

Query: 563 RKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLS 622
           +K+   D+  + +LVD + + G V +  E  E ML  G  P+V T  ++++ F + G + 
Sbjct: 349 QKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLID 408

Query: 623 DAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGFCHELMAVSGHPAHMFLLSMPS 682
           +A  LL+ M + G KP+  +YT++L     A    D       M   G P +    +   
Sbjct: 409 EAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLI 468

Query: 683 PGPDGQNVRDHVGSFLEMMHSEDRESKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVY 742
                + + +     L+ M              V+D L K+G  EEA  +  V   K + 
Sbjct: 469 NFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGIS 528

Query: 743 PDAV 746
           P+ +
Sbjct: 529 PNTI 532



 Score =  110 bits (275), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 63/208 (30%), Positives = 112/208 (53%)

Query: 354 AGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNE 413
            G K +  +YT ++  L  A ++    +L+ QM++ GC PN VT+N LI+   +   + +
Sbjct: 420 CGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQ 479

Query: 414 ALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIIN 473
           A+++ KQM V GC PD ++Y T+ID   KAG  + A+++   M   G+SP+T  YS I  
Sbjct: 480 AIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIAC 539

Query: 474 CLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEP 533
            L + G +    Q+F  + +     + V YN +I+   K      A+  +  M + G  P
Sbjct: 540 ALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGCMP 599

Query: 534 DKVTYSIVMEVLGHCGYLDEAEAVFAEM 561
           ++ TY+++++ L   G   EA+ + +E+
Sbjct: 600 NESTYTMLIKGLASEGLAKEAQELLSEL 627



 Score = 94.0 bits (232), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 99/463 (21%), Positives = 178/463 (38%), Gaps = 76/463 (16%)

Query: 393 PNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDM 452
           PN  T+  ++        + +AL+V  +M   GC P    Y  +++   ++G    ++ +
Sbjct: 109 PNAYTFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRV 168

Query: 453 YKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAK 512
            + M A G + DT   ++++N + + G +  A  L  ++   GC  ++V+YN ++     
Sbjct: 169 LEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCM 228

Query: 513 ARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPV 572
           A+ +    +L  +M      P+ VT++ ++  L   G  +    V A+M      PD  +
Sbjct: 229 AKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRM 288

Query: 573 YGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSA------------------ 614
           Y  ++D   K G++  A E    M   GL+PNV   N++L                    
Sbjct: 289 YATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMF 348

Query: 615 -----------------FLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPY 657
                            F + G +     LL+ ML+ G  P + TYT +++         
Sbjct: 349 QKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVIN--------- 399

Query: 658 DMGFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHV--------GSFLEMMHSEDRESK 709
             GFC E +      A M L SM S G     V   +        G +++      +  +
Sbjct: 400 --GFCKEGLI---DEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQ 454

Query: 710 RGL------VDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAVKEKGMSYWLINLHVMSD 763
           +G        + +++FL K GL E+A  + +        PD          LI+   + D
Sbjct: 455 QGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPD----------LISYSTVID 504

Query: 764 GTAVIALSRTLAWFRKQMLISGVGPSRI---DIVTGWGRRSRV 803
           G      +         M+  G+ P+ I    I     R  RV
Sbjct: 505 GLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREGRV 547



 Score = 78.6 bits (192), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 45/178 (25%), Positives = 87/178 (48%)

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
           Q G   +  T+ T++  L +        +LL QM+ +GC P++++Y+ +I   G+A    
Sbjct: 454 QQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTE 513

Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
           EAL++   M   G  P+ + Y ++    ++ G ++  + M+  ++   +  D   Y+ +I
Sbjct: 514 EALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVI 573

Query: 473 NCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAG 530
           + L K      A   F  MV+ GC+PN  TY ++I   A     + A +L  ++ + G
Sbjct: 574 SSLCKRWETDRAIDFFAYMVSNGCMPNESTYTMLIKGLASEGLAKEAQELLSELCSRG 631


>gi|15983487|gb|AAL11611.1|AF424618_1 AT5g04810/MUK11_13 [Arabidopsis thaliana]
          Length = 950

 Score =  153 bits (387), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 85/319 (26%), Positives = 164/319 (51%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           ++ G KH+  TY+ M+    + + +     + + MV++G +P+V+ YN +I ++     +
Sbjct: 509 KEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGMKPDVILYNNIISAFCGMGNM 568

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
           + A+   K+MQ +   P   T+  +I  +AK+G +  +++++  M+  G  P   T++ +
Sbjct: 569 DRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGL 628

Query: 472 INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF 531
           IN L +   ++ A ++  EM   G   N  TY  ++   A   +   A + +  +QN G 
Sbjct: 629 INGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGL 688

Query: 532 EPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWE 591
           + D  TY  +++     G +  A AV  EM  +N   +  VY +L+D W + G+V +A +
Sbjct: 689 DVDIFTYEALLKACCKSGRMQSALAVTKEMSARNIPRNSFVYNILIDGWARRGDVWEAAD 748

Query: 592 WYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCT 651
             + M + G++P++ T  S +SA  + G ++ A   ++ M  LG+KP+++TYT L+    
Sbjct: 749 LIQQMKKEGVKPDIHTYTSFISACSKAGDMNRATQTIEEMEALGVKPNIKTYTTLIKGWA 808

Query: 652 EARSPYDMGFCHELMAVSG 670
            A  P     C+E M   G
Sbjct: 809 RASLPEKALSCYEEMKAMG 827



 Score =  118 bits (296), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 69/259 (26%), Positives = 127/259 (49%), Gaps = 4/259 (1%)

Query: 392 QPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMD 451
           +P+   +  ++  YGR   ++ A + F++M+  G  P    Y +LI  +A    +D A+ 
Sbjct: 304 KPSRTEFGLMVKFYGRRGDMHRARETFERMRARGITPTSRIYTSLIHAYAVGRDMDEALS 363

Query: 452 MYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQA 511
             +KM+  G+     TYSVI+    KAGH +AA   F E        N   Y  +I    
Sbjct: 364 CVRKMKEEGIEMSLVTYSVIVGGFSKAGHAEAADYWFDEAKRIHKTLNASIYGKIIYAHC 423

Query: 512 KARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEA--VFAEMRRKNWVPD 569
           +  N + A  L R+M+  G +     Y  +M+  G+    DE +   VF  ++   + P 
Sbjct: 424 QTCNMERAEALVREMEEEGIDAPIAIYHTMMD--GYTMVADEKKGLVVFKRLKECGFTPT 481

Query: 570 EPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQ 629
              YG L++L+ K G + KA E    M + G++ N+ T + +++ F+++   ++A+ + +
Sbjct: 482 VVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFE 541

Query: 630 GMLNLGLKPSLQTYTLLLS 648
            M+  G+KP +  Y  ++S
Sbjct: 542 DMVKEGMKPDVILYNNIIS 560



 Score =  118 bits (296), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 69/296 (23%), Positives = 141/296 (47%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           ++ G +    TY+ +VG   +A    A +   D+  R     N   Y ++I+++ +   +
Sbjct: 369 KEEGIEMSLVTYSVIVGGFSKAGHAEAADYWFDEAKRIHKTLNASIYGKIIYAHCQTCNM 428

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
             A  + ++M+  G +     Y T++D +         + ++K+++  G +P   TY  +
Sbjct: 429 ERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKECGFTPTVVTYGCL 488

Query: 472 INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF 531
           IN   K G +  A ++   M  +G   NL TY++MI    K +++ +A  ++ DM   G 
Sbjct: 489 INLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGM 548

Query: 532 EPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWE 591
           +PD + Y+ ++      G +D A     EM++    P    +  ++  + K+G++R++ E
Sbjct: 549 KPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSLE 608

Query: 592 WYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
            ++ M + G  P V T N L++  +   Q+  A  +L  M   G+  +  TYT ++
Sbjct: 609 VFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIM 664



 Score =  117 bits (294), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 75/279 (26%), Positives = 128/279 (45%), Gaps = 4/279 (1%)

Query: 350 LRRQAGFKHDEHTYTTMVGILGRARQFGAINK---LLDQMVRDGCQPNVVTYNRLIHSYG 406
           ++     +H   T T M  I G A+  G + +   + D M R GC P V T+N LI+   
Sbjct: 575 VKEMQKLRHRPTTRTFMPIIHGYAKS-GDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLV 633

Query: 407 RANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTF 466
               + +A+++  +M + G   +  TY  ++  +A  G    A + + ++Q  GL  D F
Sbjct: 634 EKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIF 693

Query: 467 TYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDM 526
           TY  ++    K+G +Q+A  +  EM  +    N   YNI+I   A+  +   A  L + M
Sbjct: 694 TYEALLKACCKSGRMQSALAVTKEMSARNIPRNSFVYNILIDGWARRGDVWEAADLIQQM 753

Query: 527 QNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNV 586
           +  G +PD  TY+  +      G ++ A     EM      P+   Y  L+  W +A   
Sbjct: 754 KKEGVKPDIHTYTSFISACSKAGDMNRATQTIEEMEALGVKPNIKTYTTLIKGWARASLP 813

Query: 587 RKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAY 625
            KA   YE M   G++P+    + LL++ L    +++AY
Sbjct: 814 EKALSCYEEMKAMGIKPDKAVYHCLLTSLLSRASIAEAY 852



 Score =  112 bits (280), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 74/287 (25%), Positives = 131/287 (45%), Gaps = 1/287 (0%)

Query: 382 LLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHA 441
           L+ +M  +G    +  Y+ ++  Y       + L VFK+++  G  P  VTY  LI+++ 
Sbjct: 434 LVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKECGFTPTVVTYGCLINLYT 493

Query: 442 KAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLV 501
           K G +  A+++ + M+  G+  +  TYS++IN   K      A  +F +MV +G  P+++
Sbjct: 494 KVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGMKPDVI 553

Query: 502 TYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEM 561
            YN +I+      N   A++  ++MQ     P   T+  ++      G +  +  VF  M
Sbjct: 554 LYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSLEVFDMM 613

Query: 562 RRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQL 621
           RR   VP    +  L++   +   + KA E  + M  AG+  N  T   ++  +  VG  
Sbjct: 614 RRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGYASVGDT 673

Query: 622 SDAYHLLQGMLNLGLKPSLQTYTLLL-SCCTEARSPYDMGFCHELMA 667
             A+     + N GL   + TY  LL +CC   R    +    E+ A
Sbjct: 674 GKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEMSA 720



 Score =  100 bits (250), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 64/285 (22%), Positives = 132/285 (46%)

Query: 363 YTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQ 422
           +  MV   GR        +  ++M   G  P    Y  LIH+Y     ++EAL   ++M+
Sbjct: 310 FGLMVKFYGRRGDMHRARETFERMRARGITPTSRIYTSLIHAYAVGRDMDEALSCVRKMK 369

Query: 423 VVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQ 482
             G E   VTY  ++   +KAG  + A   + + +    + +   Y  II    +  +++
Sbjct: 370 EEGIEMSLVTYSVIVGGFSKAGHAEAADYWFDEAKRIHKTLNASIYGKIIYAHCQTCNME 429

Query: 483 AAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVM 542
            A  L  EM  +G    +  Y+ M+       + +  L +++ ++  GF P  VTY  ++
Sbjct: 430 RAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKECGFTPTVVTYGCLI 489

Query: 543 EVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLR 602
            +    G + +A  V   M+ +    +   Y ++++ + K  +   A+  +E M++ G++
Sbjct: 490 NLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGMK 549

Query: 603 PNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
           P+V   N+++SAF  +G +  A   ++ M  L  +P+ +T+  ++
Sbjct: 550 PDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPII 594



 Score = 95.9 bits (237), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 69/262 (26%), Positives = 118/262 (45%), Gaps = 13/262 (4%)

Query: 286 PFSRHFASTGNVVES--VSRILRQWKWGPLAEEALGNTNYSMDAYQANQVLKQLQDHTVA 343
           P    +A +G++  S  V  ++R+    P      G  N  ++  Q  + ++ L + T+A
Sbjct: 592 PIIHGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLA 651

Query: 344 LGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIH 403
                      G   +EHTYT ++         G   +   ++  +G   ++ TY  L+ 
Sbjct: 652 -----------GVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLK 700

Query: 404 SYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSP 463
           +  ++  +  AL V K+M       +   Y  LID  A+ G +  A D+ ++M+  G+ P
Sbjct: 701 ACCKSGRMQSALAVTKEMSARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEGVKP 760

Query: 464 DTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLY 523
           D  TY+  I+   KAG +  A Q   EM   G  PN+ TY  +I   A+A   + AL  Y
Sbjct: 761 DIHTYTSFISACSKAGDMNRATQTIEEMEALGVKPNIKTYTTLIKGWARASLPEKALSCY 820

Query: 524 RDMQNAGFEPDKVTYSIVMEVL 545
            +M+  G +PDK  Y  ++  L
Sbjct: 821 EEMKAMGIKPDKAVYHCLLTSL 842


>gi|9755888|emb|CAC01941.1| RSP67.2 [Raphanus sativus]
          Length = 700

 Score =  153 bits (387), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 122/517 (23%), Positives = 238/517 (46%), Gaps = 37/517 (7%)

Query: 363 YTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQ 422
           Y   + +  +++      KL D+M++ G +P+  T+  LI    +    N A++ F++M 
Sbjct: 176 YNVTMKVFRKSKDLEKSEKLFDEMLQRGVKPDNATFTTLISCARQCGLPNRAVEWFEKMP 235

Query: 423 VVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQ 482
             G EPD VT   +ID + +AG +++A+ +Y + +      D  T+S +I   G AG+  
Sbjct: 236 SFGLEPDNVTLAAMIDAYGRAGNVEMALSLYDRARTEKWRIDPVTFSTLIRIYGYAGNYD 295

Query: 483 AAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVM 542
               ++ EM + G  PNLV YN ++    KA+    A  +++D+ + GFEP+  TY+ ++
Sbjct: 296 GCLNIYEEMKSLGVKPNLVIYNRLLDSMGKAKRPWQATMIHKDLISNGFEPNWSTYAALI 355

Query: 543 EVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAG-L 601
              G   Y ++A  ++ +M+ K       +Y  L+ +    G V +A+E ++ M  +G  
Sbjct: 356 RAYGRARYGEDALVIYRQMKGKGMELTVLLYNTLLSMCADIGYVDEAFEIFQDMKSSGTC 415

Query: 602 RPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGF 661
            P+  T +SL++ +   G++S+A   L+ M   G +P+L   T L+ C  +A+   D+  
Sbjct: 416 EPDSWTFSSLITVYSCCGRVSEAEAALREMREAGFEPTLFVLTSLIQCYGKAKQVDDVVR 475

Query: 662 CHE-LMAVSGHPAHMF---LLSMPSPGPDG---------QNVRDHVGSFLEMMHSED--- 705
             E ++ +   P   F   LL++ +  P           +  +  +G   +M+  E+   
Sbjct: 476 TFEQVLELGIEPDDRFCGCLLNVMTQTPKEEIGKLIGCVEKAKPKLGRVEKMLVEEENCE 535

Query: 706 ----RESKRGLVDAVVDFLHKSGLK------------EEAGSVWEVAAQKNVYPDAVKEK 749
               ++    L+D++   ++K+ L             E+A  + ++  + ++Y   ++ K
Sbjct: 536 EGVLKKEASELIDSIGSDVNKAYLNCLIDLCVNLNKLEKACEILQLGLEYDIY-SGLQSK 594

Query: 750 GMSYWLINLHVMSDGTAVIALSRTLAWFRKQMLISGVG-PSRIDIVTGWGRRSRVTGTSL 808
             + W ++L  +S G A+ AL   +    +  L SG   P  + I TG G+  + +   L
Sbjct: 595 SDTQWSLHLKSLSLGAALTALHVWMNDLSEAALTSGEEFPPLLGINTGHGKH-KYSDKGL 653

Query: 809 VRQAVQELLHMFSFPFFTENGNSGCFVGCGEPLNKWL 845
                +  L   + PF       G F+        WL
Sbjct: 654 A-AVFESHLKELNAPFHEAPDKVGWFLTTSVAAKTWL 689



 Score =  103 bits (257), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 60/239 (25%), Positives = 122/239 (51%), Gaps = 2/239 (0%)

Query: 342 VALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRL 401
           +AL  ++  R +  ++ D  T++T++ I G A  +     + ++M   G +PN+V YNRL
Sbjct: 261 MALSLYDRARTEK-WRIDPVTFSTLIRIYGYAGNYDGCLNIYEEMKSLGVKPNLVIYNRL 319

Query: 402 IHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGL 461
           + S G+A    +A  + K +   G EP+  TY  LI  + +A + + A+ +Y++M+  G+
Sbjct: 320 LDSMGKAKRPWQATMIHKDLISNGFEPNWSTYAALIRAYGRARYGEDALVIYRQMKGKGM 379

Query: 462 SPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQG-CIPNLVTYNIMIALQAKARNYQSAL 520
                 Y+ +++     G++  A ++F +M + G C P+  T++ +I + +       A 
Sbjct: 380 ELTVLLYNTLLSMCADIGYVDEAFEIFQDMKSSGTCEPDSWTFSSLITVYSCCGRVSEAE 439

Query: 521 KLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDL 579
              R+M+ AGFEP     + +++  G    +D+    F ++      PD+   G L+++
Sbjct: 440 AALREMREAGFEPTLFVLTSLIQCYGKAKQVDDVVRTFEQVLELGIEPDDRFCGCLLNV 498



 Score = 99.0 bits (245), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 74/308 (24%), Positives = 139/308 (45%), Gaps = 22/308 (7%)

Query: 375 QFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQ------------ 422
           ++ ++ KL + +  D C PN    + +I  +G   +  +A+     M             
Sbjct: 106 RYSSLVKLAESL--DSCPPNEADVSDVIAKFGSKLFEQDAVVALNNMTNPETAPLVLNNL 163

Query: 423 VVGCEPDR--VTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGH 480
           +   +P R  + Y   + +  K+  L+ +  ++ +M   G+ PD  T++ +I+C  + G 
Sbjct: 164 LETLKPTREVILYNVTMKVFRKSKDLEKSEKLFDEMLQRGVKPDNATFTTLISCARQCGL 223

Query: 481 LQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSI 540
              A + F +M + G  P+ VT   MI    +A N + AL LY   +   +  D VT+S 
Sbjct: 224 PNRAVEWFEKMPSFGLEPDNVTLAAMIDAYGRAGNVEMALSLYDRARTEKWRIDPVTFST 283

Query: 541 VMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAG 600
           ++ + G+ G  D    ++ EM+     P+  +Y  L+D  GKA    +A   ++ ++  G
Sbjct: 284 LIRIYGYAGNYDGCLNIYEEMKSLGVKPNLVIYNRLLDSMGKAKRPWQATMIHKDLISNG 343

Query: 601 LRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMG 660
             PN  T  +L+ A+ R     DA  + + M   G++ ++  Y  LLS C       D+G
Sbjct: 344 FEPNWSTYAALIRAYGRARYGEDALVIYRQMKGKGMELTVLLYNTLLSMCA------DIG 397

Query: 661 FCHELMAV 668
           +  E   +
Sbjct: 398 YVDEAFEI 405



 Score = 77.0 bits (188), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 42/171 (24%), Positives = 83/171 (48%)

Query: 500 LVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFA 559
           ++ YN+ + +  K+++ + + KL+ +M   G +PD  T++ ++     CG  + A   F 
Sbjct: 173 VILYNVTMKVFRKSKDLEKSEKLFDEMLQRGVKPDNATFTTLISCARQCGLPNRAVEWFE 232

Query: 560 EMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVG 619
           +M      PD      ++D +G+AGNV  A   Y+       R +  T ++L+  +   G
Sbjct: 233 KMPSFGLEPDNVTLAAMIDAYGRAGNVEMALSLYDRARTEKWRIDPVTFSTLIRIYGYAG 292

Query: 620 QLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGFCHELMAVSG 670
                 ++ + M +LG+KP+L  Y  LL    +A+ P+     H+ +  +G
Sbjct: 293 NYDGCLNIYEEMKSLGVKPNLVIYNRLLDSMGKAKRPWQATMIHKDLISNG 343


>gi|224157081|ref|XP_002337799.1| predicted protein [Populus trichocarpa]
 gi|222869732|gb|EEF06863.1| predicted protein [Populus trichocarpa]
          Length = 367

 Score =  153 bits (387), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 93/324 (28%), Positives = 169/324 (52%), Gaps = 5/324 (1%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           G K    TY  ++  L +  ++     +L +M+  G  P+  TYN L+    R +  +EA
Sbjct: 31  GLKPSLFTYNAIINGLCKKGRYARAKGILIEMLNIGLSPDTTTYNTLLVESCRRDNFSEA 90

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
            ++F +M   G  PD V++ +L+ + ++   LD A+  ++ M+  GL PD   Y+V+++ 
Sbjct: 91  KEIFGEMLRQGVVPDLVSFSSLMAVFSRNRHLDQALVYFRDMKKFGLVPDNVIYTVLMHG 150

Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPD 534
             + G++  A ++  EM+ QGC+ +++ YN ++    K +    A KL+ +M   G  PD
Sbjct: 151 YCRNGNMLEALKIRDEMLEQGCVLDVIAYNTILNGLCKEKMLTDADKLFDEMVERGALPD 210

Query: 535 KVTYSIVMEVLGHC--GYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEW 592
             T++ ++   GHC  G + +A ++F  M ++N  PD   Y  L+D + K G + KA E 
Sbjct: 211 FYTFTTLIH--GHCQDGNMTKALSLFGTMTQRNIKPDIVAYNTLIDGFCKVGEMEKASEL 268

Query: 593 YEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTY-TLLLSCCT 651
           ++ M+   + PN  T   L++A+  VG +S+A+ L   M+  G+KP+L T  T++   C 
Sbjct: 269 WDGMISRKIFPNHITYGILINAYCSVGHVSEAFRLWDVMIEKGIKPTLVTCNTVIKGYCR 328

Query: 652 EARSPYDMGFCHELMAVSGHPAHM 675
              S     F   ++A    P H+
Sbjct: 329 SGDSSKADEFLGRMIAKGVAPDHI 352



 Score =  151 bits (381), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 81/294 (27%), Positives = 151/294 (51%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           G   D  TY T++    R   F    ++  +M+R G  P++V+++ L+  + R  +L++A
Sbjct: 66  GLSPDTTTYNTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLMAVFSRNRHLDQA 125

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
           L  F+ M+  G  PD V Y  L+  + + G +  A+ +  +M   G   D   Y+ I+N 
Sbjct: 126 LVYFRDMKKFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYNTILNG 185

Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPD 534
           L K   L  A +LF EMV +G +P+  T+  +I    +  N   AL L+  M     +PD
Sbjct: 186 LCKEKMLTDADKLFDEMVERGALPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQRNIKPD 245

Query: 535 KVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYE 594
            V Y+ +++     G +++A  ++  M  +   P+   YG+L++ +   G+V +A+  ++
Sbjct: 246 IVAYNTLIDGFCKVGEMEKASELWDGMISRKIFPNHITYGILINAYCSVGHVSEAFRLWD 305

Query: 595 AMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
            M++ G++P + TCN+++  + R G  S A   L  M+  G+ P   +Y  L++
Sbjct: 306 VMIEKGIKPTLVTCNTVIKGYCRSGDSSKADEFLGRMIAKGVAPDHISYNTLIN 359



 Score =  131 bits (330), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 81/291 (27%), Positives = 141/291 (48%), Gaps = 39/291 (13%)

Query: 395 VVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYK 454
           +VTYN LI +Y R   L EA ++   M   G +P   TY  +I+   K G    A  +  
Sbjct: 1   MVTYNTLIGAYCREGLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILI 60

Query: 455 KMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKAR 514
           +M   GLSPDT TY+ ++    +  +   A ++F EM+ QG +P+LV+++ ++A+ ++ R
Sbjct: 61  EMLNIGLSPDTTTYNTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLMAVFSRNR 120

Query: 515 NYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHC-------------------------- 548
           +   AL  +RDM+  G  PD V Y+++M   G+C                          
Sbjct: 121 HLDQALVYFRDMKKFGLVPDNVIYTVLMH--GYCRNGNMLEALKIRDEMLEQGCVLDVIA 178

Query: 549 -----------GYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAML 597
                        L +A+ +F EM  +  +PD   +  L+    + GN+ KA   +  M 
Sbjct: 179 YNTILNGLCKEKMLTDADKLFDEMVERGALPDFYTFTTLIHGHCQDGNMTKALSLFGTMT 238

Query: 598 QAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
           Q  ++P++   N+L+  F +VG++  A  L  GM++  + P+  TY +L++
Sbjct: 239 QRNIKPDIVAYNTLIDGFCKVGEMEKASELWDGMISRKIFPNHITYGILIN 289



 Score =  128 bits (321), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 103/401 (25%), Positives = 168/401 (41%), Gaps = 67/401 (16%)

Query: 431 VTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCE 490
           VTY TLI  + + G L+ A ++   M   GL P  FTY+ IIN L K G    A  +  E
Sbjct: 2   VTYNTLIGAYCREGLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILIE 61

Query: 491 MVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGY 550
           M+N G  P+  TYN ++    +  N+  A +++ +M   G  PD V++S +M V     +
Sbjct: 62  MLNIGLSPDTTTYNTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLMAVFSRNRH 121

Query: 551 LDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNS 610
           LD+A   F +M++   VPD  +Y +L+  + + GN+ +A +  + ML+ G   +V   N+
Sbjct: 122 LDQALVYFRDMKKFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYNT 181

Query: 611 LLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGFCHELMAVSG 670
           +L+   +   L+DA  L   M+  G  P   T+T L+            G C        
Sbjct: 182 ILNGLCKEKMLTDADKLFDEMVERGALPDFYTFTTLIH-----------GHCQ------- 223

Query: 671 HPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRESKRGLV--DAVVDFLHKSGLKEE 728
                          DG N+   +  F  M     R  K  +V  + ++D   K G  E+
Sbjct: 224 ---------------DG-NMTKALSLFGTMTQ---RNIKPDIVAYNTLIDGFCKVGEMEK 264

Query: 729 AGSVWEVAAQKNVYP-------------------------DAVKEKGMSYWLINLHVMSD 763
           A  +W+    + ++P                         D + EKG+   L+  + +  
Sbjct: 265 ASELWDGMISRKIFPNHITYGILINAYCSVGHVSEAFRLWDVMIEKGIKPTLVTCNTVIK 324

Query: 764 GTAVIALSRTLAWFRKQMLISGVGPSRID---IVTGWGRRS 801
           G      S     F  +M+  GV P  I    ++    RRS
Sbjct: 325 GYCRSGDSSKADEFLGRMIAKGVAPDHISYNTLINDGKRRS 365



 Score = 56.2 bits (134), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 38/133 (28%), Positives = 66/133 (49%), Gaps = 1/133 (0%)

Query: 341 TVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNR 400
           T AL  F  +  Q   K D   Y T++    +  +    ++L D M+     PN +TY  
Sbjct: 228 TKALSLFGTMT-QRNIKPDIVAYNTLIDGFCKVGEMEKASELWDGMISRKIFPNHITYGI 286

Query: 401 LIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAG 460
           LI++Y    +++EA  ++  M   G +P  VT  T+I  + ++G    A +   +M A G
Sbjct: 287 LINAYCSVGHVSEAFRLWDVMIEKGIKPTLVTCNTVIKGYCRSGDSSKADEFLGRMIAKG 346

Query: 461 LSPDTFTYSVIIN 473
           ++PD  +Y+ +IN
Sbjct: 347 VAPDHISYNTLIN 359


>gi|8778650|gb|AAF79658.1|AC025416_32 F5O11.4 [Arabidopsis thaliana]
          Length = 975

 Score =  153 bits (387), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 91/311 (29%), Positives = 158/311 (50%), Gaps = 11/311 (3%)

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
           + G++ +  T++T++  L    +     +L+D+MV  G +P+++T N L++    +    
Sbjct: 249 KLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEA 308

Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
           EA+ +  +M   GC+P+ VTY  ++++  K+G   +AM++ +KM+   +  D   YS+II
Sbjct: 309 EAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIII 368

Query: 473 NCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFE 532
           + L K G L  A  LF EM  +G   N++TYNI+I     A  +    KL RDM      
Sbjct: 369 DGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKIN 428

Query: 533 PDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEW 592
           P+ VT+S++++     G L EAE +  EM  +   PD   Y  L+D + K  ++ KA + 
Sbjct: 429 PNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQM 488

Query: 593 YEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTE 652
            + M+  G  PN+ T N L++ + +  ++ D   L + M   G+     TY  L+     
Sbjct: 489 VDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQ---- 544

Query: 653 ARSPYDMGFCH 663
                  GFC 
Sbjct: 545 -------GFCE 548



 Score =  145 bits (366), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 84/296 (28%), Positives = 148/296 (50%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
            +   K D   Y+ ++  L +         L ++M   G   N++TYN LI  +  A   
Sbjct: 353 EERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRW 412

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
           ++   + + M      P+ VT+  LID   K G L  A +++K+M   G++PDT TY+ +
Sbjct: 413 DDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSL 472

Query: 472 INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF 531
           I+   K  HL  A+Q+   MV++GC PN+ T+NI+I    KA      L+L+R M   G 
Sbjct: 473 IDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGV 532

Query: 532 EPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWE 591
             D VTY+ +++     G L+ A+ +F EM  +   P+   Y +L+D     G   KA E
Sbjct: 533 VADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALE 592

Query: 592 WYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
            +E + ++ +  ++   N ++       ++ DA+ L   +   G+KP ++TY +++
Sbjct: 593 IFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMI 648



 Score =  143 bits (360), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 94/329 (28%), Positives = 163/329 (49%), Gaps = 4/329 (1%)

Query: 322 NYSMDAYQANQVLKQLQDHTV---ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGA 378
           N  +DA + + ++  L  H     A   FN +  + G   +  TY  ++G    A ++  
Sbjct: 356 NIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMK-GITTNIITYNILIGGFCNAGRWDD 414

Query: 379 INKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLID 438
             KLL  M++    PNVVT++ LI S+ +   L EA ++ K+M   G  PD +TY +LID
Sbjct: 415 GAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLID 474

Query: 439 IHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIP 498
              K   LD A  M   M + G  P+  T++++IN   KA  +    +LF +M  +G + 
Sbjct: 475 GFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVA 534

Query: 499 NLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVF 558
           + VTYN +I    +      A +L+++M +    P+ VTY I+++ L   G  ++A  +F
Sbjct: 535 DTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIF 594

Query: 559 AEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRV 618
            ++ +     D  +Y +++     A  V  AW+ + ++   G++P V T N ++    + 
Sbjct: 595 EKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKK 654

Query: 619 GQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
           G LS+A  L + M   G  P   TY +L+
Sbjct: 655 GPLSEAELLFRKMEEDGHAPDGWTYNILI 683



 Score =  140 bits (353), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 81/296 (27%), Positives = 155/296 (52%)

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
           + G K D  T  T+V  L  + +      L+D+MV  GCQPN VTY  +++   ++    
Sbjct: 284 EMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTA 343

Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
            A+++ ++M+    + D V Y  +ID   K G LD A +++ +M+  G++ +  TY+++I
Sbjct: 344 LAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILI 403

Query: 473 NCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFE 532
                AG      +L  +M+ +   PN+VT++++I    K    + A +L+++M + G  
Sbjct: 404 GGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIA 463

Query: 533 PDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEW 592
           PD +TY+ +++      +LD+A  +   M  K   P+   + +L++ + KA  +    E 
Sbjct: 464 PDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLEL 523

Query: 593 YEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
           +  M   G+  +  T N+L+  F  +G+L+ A  L Q M++  + P++ TY +LL 
Sbjct: 524 FRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLD 579



 Score =  131 bits (330), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 84/302 (27%), Positives = 146/302 (48%), Gaps = 11/302 (3%)

Query: 363 YTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQ 422
           ++ +   + + +Q+  +  L  QM   G   N+ T + +I+ + R   L  A     ++ 
Sbjct: 189 FSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMINCFCRCRKLCLAFSAMGKII 248

Query: 423 VVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQ 482
            +G EP+ +T+ TLI+     G +  A+++  +M   G  PD  T + ++N L  +G   
Sbjct: 249 KLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEA 308

Query: 483 AAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVM 542
            A  L  +MV  GC PN VTY  ++ +  K+     A++L R M+    + D V YSI++
Sbjct: 309 EAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIII 368

Query: 543 EVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLR 602
           + L   G LD A  +F EM  K    +   Y +L+  +  AG      +    M++  + 
Sbjct: 369 DGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKIN 428

Query: 603 PNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGFC 662
           PNV T + L+ +F++ G+L +A  L + M++ G+ P   TYT L+            GFC
Sbjct: 429 PNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLID-----------GFC 477

Query: 663 HE 664
            E
Sbjct: 478 KE 479



 Score =  124 bits (311), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 72/296 (24%), Positives = 147/296 (49%)

Query: 362 TYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQM 421
           T++ ++    +  +     +L  +M+  G  P+ +TY  LI  + + N+L++A  +   M
Sbjct: 433 TFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLM 492

Query: 422 QVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHL 481
              GC+P+  T+  LI+ + KA  +D  +++++KM   G+  DT TY+ +I    + G L
Sbjct: 493 VSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKL 552

Query: 482 QAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIV 541
             A +LF EMV++   PN+VTY I++         + AL+++  ++ +  E D   Y+I+
Sbjct: 553 NVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNII 612

Query: 542 MEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGL 601
           +  + +   +D+A  +F  +  K   P    Y +++    K G + +A   +  M + G 
Sbjct: 613 IHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGH 672

Query: 602 RPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPY 657
            P+  T N L+ A L  G  + +  L++ +   G      T  +++   ++ ++ Y
Sbjct: 673 APDGWTYNILIRAHLGDGDATKSVKLIEELKRCGFSVDASTIKMVIDMLSDDKANY 728



 Score =  124 bits (310), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 72/253 (28%), Positives = 129/253 (50%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           G   D  TYT+++    +       N+++D MV  GC PN+ T+N LI+ Y +AN +++ 
Sbjct: 461 GIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDG 520

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
           L++F++M + G   D VTY TLI    + G L+VA +++++M +  + P+  TY ++++ 
Sbjct: 521 LELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDG 580

Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPD 534
           L   G  + A ++F ++       ++  YNI+I     A     A  L+  +   G +P 
Sbjct: 581 LCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPG 640

Query: 535 KVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYE 594
             TY+I++  L   G L EAE +F +M      PD   Y +L+      G+  K+ +  E
Sbjct: 641 VKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIE 700

Query: 595 AMLQAGLRPNVPT 607
            + + G   +  T
Sbjct: 701 ELKRCGFSVDAST 713



 Score =  108 bits (271), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 69/267 (25%), Positives = 123/267 (46%)

Query: 382 LLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHA 441
           L   M+     P V+ ++RL  +  +    +  L + KQM++ G   +  T   +I+   
Sbjct: 173 LFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMINCFC 232

Query: 442 KAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLV 501
           +   L +A     K+   G  P+T T+S +IN L   G +  A +L   MV  G  P+L+
Sbjct: 233 RCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLI 292

Query: 502 TYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEM 561
           T N ++     +     A+ L   M   G +P+ VTY  V+ V+   G    A  +  +M
Sbjct: 293 TINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKM 352

Query: 562 RRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQL 621
             +N   D   Y +++D   K G++  A+  +  M   G+  N+ T N L+  F   G+ 
Sbjct: 353 EERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRW 412

Query: 622 SDAYHLLQGMLNLGLKPSLQTYTLLLS 648
            D   LL+ M+   + P++ T+++L+ 
Sbjct: 413 DDGAKLLRDMIKRKINPNVVTFSVLID 439



 Score = 83.2 bits (204), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 53/191 (27%), Positives = 89/191 (46%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           G   D  TY T++       +     +L  +MV     PN+VTY  L+          +A
Sbjct: 531 GVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKA 590

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
           L++F++++    E D   Y  +I     A  +D A D++  +   G+ P   TY+++I  
Sbjct: 591 LEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGG 650

Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPD 534
           L K G L  A  LF +M   G  P+  TYNI+I       +   ++KL  +++  GF  D
Sbjct: 651 LCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELKRCGFSVD 710

Query: 535 KVTYSIVMEVL 545
             T  +V+++L
Sbjct: 711 ASTIKMVIDML 721



 Score = 64.3 bits (155), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 52/213 (24%), Positives = 92/213 (43%), Gaps = 5/213 (2%)

Query: 436 LIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQG 495
           L+DI A     D A+D+++ M  +   P    +S + + + K         L  +M  +G
Sbjct: 162 LVDIKA-----DDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKG 216

Query: 496 CIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAE 555
              NL T +IMI    + R    A      +   G+EP+ +T+S ++  L   G + EA 
Sbjct: 217 IAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEAL 276

Query: 556 AVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAF 615
            +   M      PD      LV+    +G   +A    + M++ G +PN  T   +L+  
Sbjct: 277 ELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVM 336

Query: 616 LRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
            + GQ + A  LL+ M    +K     Y++++ 
Sbjct: 337 CKSGQTALAMELLRKMEERNIKLDAVKYSIIID 369


>gi|312190399|gb|ADQ43199.1| unknown [Eutrema parvulum]
          Length = 1128

 Score =  153 bits (387), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 99/392 (25%), Positives = 186/392 (47%), Gaps = 1/392 (0%)

Query: 354 AGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNE 413
           AG K    TY  M+  + +     A   L ++M   G  P+ VTYN +I  YG+   L++
Sbjct: 127 AGSKPTVFTYNIMIDCMWKEGDIEAARGLFEEMKFRGLIPDTVTYNSMIDGYGKVGRLDD 186

Query: 414 ALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIIN 473
            +  F++M+ + CEPD +TY +LI+   K+G L   ++ Y++M+ +GL P+  +YS +++
Sbjct: 187 TVYFFEEMKSMSCEPDVITYNSLINCFCKSGKLPKGLEFYREMKQSGLKPNVVSYSTLVD 246

Query: 474 CLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEP 533
              K   +Q A + + +M   G +PN  TY  ++    K  N   A +L  +M   G E 
Sbjct: 247 AFCKEDMMQQAIKFYVDMRRVGHVPNEFTYTSLVDANCKIGNLSDAFRLANEMLEVGVEW 306

Query: 534 DKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWY 593
           + VTY+ +++ L     + EAE +F +M     +P+   Y  L+  + KA N+ +A E  
Sbjct: 307 NVVTYTALIDGLCDAERMKEAEKLFGKMVTAGVIPNLASYNALIHGFVKAKNMDRALELL 366

Query: 594 EAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEA 653
             +   G++P++    + +     + ++  A  ++  M   G+K +   YT L+    ++
Sbjct: 367 NELKGRGIQPDLLLYGTFIWGLCGLEKIEAAKVVMNEMQENGIKANTLIYTTLMDAYFKS 426

Query: 654 RSPYDMGFCHELMAVSGHPAHMFLLSMPSPG-PDGQNVRDHVGSFLEMMHSEDRESKRGL 712
            +P +     E M    H   +    +   G    + V   +  F  M +    +    +
Sbjct: 427 GNPTEGLHLLEEMQELDHEVTVVTFCVLIDGLCKNKLVSKAIDYFGRMSNDFGLQPNAAV 486

Query: 713 VDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPD 744
             A++D L K    + A +++E  AQ+ + PD
Sbjct: 487 YTAMIDGLCKENQVKAATTLFEQMAQEGLVPD 518



 Score =  143 bits (360), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 95/338 (28%), Positives = 162/338 (47%), Gaps = 16/338 (4%)

Query: 328 YQANQVLKQLQDHTVAL---GFFN--WLRRQA---GFKHDEHTYTTMV--GILGRARQFG 377
           Y AN +L+++      L     F+  W  R     GF   +  ++ ++  G+L  A Q  
Sbjct: 27  YDANSILREIVLSKAELEECDVFDELWSTRNVCVPGFGVFDALFSVLIDLGMLEEATQ-- 84

Query: 378 AINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLI 437
                  +M R    P   + N L+H + +    +     FK M   G +P   TY  +I
Sbjct: 85  ----CFSKMKRFRVFPKTRSCNGLLHKFAKLGKTDGVKRFFKDMIGAGSKPTVFTYNIMI 140

Query: 438 DIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCI 497
           D   K G ++ A  ++++M+  GL PDT TY+ +I+  GK G L      F EM +  C 
Sbjct: 141 DCMWKEGDIEAARGLFEEMKFRGLIPDTVTYNSMIDGYGKVGRLDDTVYFFEEMKSMSCE 200

Query: 498 PNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAV 557
           P+++TYN +I    K+      L+ YR+M+ +G +P+ V+YS +++       + +A   
Sbjct: 201 PDVITYNSLINCFCKSGKLPKGLEFYREMKQSGLKPNVVSYSTLVDAFCKEDMMQQAIKF 260

Query: 558 FAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLR 617
           + +MRR   VP+E  Y  LVD   K GN+  A+     ML+ G+  NV T  +L+     
Sbjct: 261 YVDMRRVGHVPNEFTYTSLVDANCKIGNLSDAFRLANEMLEVGVEWNVVTYTALIDGLCD 320

Query: 618 VGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARS 655
             ++ +A  L   M+  G+ P+L +Y  L+    +A++
Sbjct: 321 AERMKEAEKLFGKMVTAGVIPNLASYNALIHGFVKAKN 358



 Score =  142 bits (359), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 94/318 (29%), Positives = 149/318 (46%), Gaps = 18/318 (5%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMV------------------RDGCQPNVV 396
           GF H   +Y  +  IL  AR +   N +L ++V                  R+ C P   
Sbjct: 5   GFNHTIESYCIVAHILFCARMYYDANSILREIVLSKAELEECDVFDELWSTRNVCVPGFG 64

Query: 397 TYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKM 456
            ++ L         L EA   F +M+     P   +   L+   AK G  D     +K M
Sbjct: 65  VFDALFSVLIDLGMLEEATQCFSKMKRFRVFPKTRSCNGLLHKFAKLGKTDGVKRFFKDM 124

Query: 457 QAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNY 516
             AG  P  FTY+++I+C+ K G ++AA  LF EM  +G IP+ VTYN MI    K    
Sbjct: 125 IGAGSKPTVFTYNIMIDCMWKEGDIEAARGLFEEMKFRGLIPDTVTYNSMIDGYGKVGRL 184

Query: 517 QSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLL 576
              +  + +M++   EPD +TY+ ++      G L +    + EM++    P+   Y  L
Sbjct: 185 DDTVYFFEEMKSMSCEPDVITYNSLINCFCKSGKLPKGLEFYREMKQSGLKPNVVSYSTL 244

Query: 577 VDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGL 636
           VD + K   +++A ++Y  M + G  PN  T  SL+ A  ++G LSDA+ L   ML +G+
Sbjct: 245 VDAFCKEDMMQQAIKFYVDMRRVGHVPNEFTYTSLVDANCKIGNLSDAFRLANEMLEVGV 304

Query: 637 KPSLQTYTLLLSCCTEAR 654
           + ++ TYT L+    +A 
Sbjct: 305 EWNVVTYTALIDGLCDAE 322



 Score =  105 bits (261), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 108/461 (23%), Positives = 194/461 (42%), Gaps = 59/461 (12%)

Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLI 402
            L F+  ++ Q+G K +  +Y+T+V    +        K    M R G  PN  TY  L+
Sbjct: 222 GLEFYREMK-QSGLKPNVVSYSTLVDAFCKEDMMQQAIKFYVDMRRVGHVPNEFTYTSLV 280

Query: 403 HSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLS 462
            +  +   L++A  +  +M  VG E + VTY  LID    A  +  A  ++ KM  AG+ 
Sbjct: 281 DANCKIGNLSDAFRLANEMLEVGVEWNVVTYTALIDGLCDAERMKEAEKLFGKMVTAGVI 340

Query: 463 PDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKL 522
           P+  +Y+ +I+   KA ++  A +L  E+  +G  P+L+ Y   I         ++A  +
Sbjct: 341 PNLASYNALIHGFVKAKNMDRALELLNELKGRGIQPDLLLYGTFIWGLCGLEKIEAAKVV 400

Query: 523 YRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRR------------------K 564
             +MQ  G + + + Y+ +M+     G   E   +  EM+                   K
Sbjct: 401 MNEMQENGIKANTLIYTTLMDAYFKSGNPTEGLHLLEEMQELDHEVTVVTFCVLIDGLCK 460

Query: 565 NWV------------------PDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVP 606
           N +                  P+  VY  ++D   K   V+ A   +E M Q GL P+  
Sbjct: 461 NKLVSKAIDYFGRMSNDFGLQPNAAVYTAMIDGLCKENQVKAATTLFEQMAQEGLVPDRT 520

Query: 607 TCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL---SCCTE---ARSPYDMG 660
              SL+   L+ G + +A  L   M  +G+K  L  YT L+   S C +   ARS     
Sbjct: 521 AYTSLMDGNLKQGNMLEALALRDKMAEIGMKLDLLAYTSLVWGFSQCNQLQKARS----- 575

Query: 661 FCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVG--SFL---EMMHSEDRESKRGLVDA 715
           F  E++     P  +  + +     +   + + VG  S+L   +++ S++  +     D 
Sbjct: 576 FLEEMIGEEILPDEVLCIGVLKKHYELGCIDEAVGLQSYLMKHQLLTSDNNNALPNYSDP 635

Query: 716 VVDFLHKSGLKEEAGSVWEVAAQKNVYPDAVKEKGMSY-WL 755
            +DF      +E    VW++ ++  +    +  +G +Y W+
Sbjct: 636 SLDF-----FEEHRNRVWDLQSELLLRTHQLIVRGEAYGWI 671


>gi|296083087|emb|CBI22491.3| unnamed protein product [Vitis vinifera]
          Length = 548

 Score =  153 bits (387), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 86/313 (27%), Positives = 162/313 (51%), Gaps = 2/313 (0%)

Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLI 402
           A+  F  +R + G K +  T+  ++ + G   +F  + K+ + +    C P++VT+N L+
Sbjct: 123 AVQIFEEMRNE-GCKPNICTFNALIKMHGNRGKFTEMMKVFEDIKTFQCSPDIVTWNTLL 181

Query: 403 HSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLS 462
             +G+    +E   VFK+M+  G  P+R T+ TLI  +++ G  D AM +YK+M  AG++
Sbjct: 182 SVFGQNGMDSEVSGVFKEMKRAGFVPERDTFNTLISSYSRCGSFDQAMAVYKRMLEAGVN 241

Query: 463 PDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKL 522
           PD  +Y+ ++  L + G  + + ++  EM +  C PN +TY  ++   A  +  +    L
Sbjct: 242 PDLSSYNAVLAALARGGLWKQSEKVLAEMKDGRCKPNELTYCSLLHAYANGKEIERMCAL 301

Query: 523 YRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGK 582
             ++ +   EP  V    ++ V   C  L E E  F E+R++ + PD      +V ++G+
Sbjct: 302 AEEIYSGIIEPRAVLLKTLVLVNSKCDLLMETERAFLELRQRGFSPDITTLNAMVSIYGR 361

Query: 583 AGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQT 642
              V KA E  + M + G  P++ T NSL+  + R      +  +L+ +L  G++P + +
Sbjct: 362 RQMVAKANEILDCMKRGGFTPSLTTYNSLMYMYSRSANFERSEEILREILAKGIRPDIIS 421

Query: 643 Y-TLLLSCCTEAR 654
           Y T++ + C   R
Sbjct: 422 YNTVIYAYCRNGR 434



 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 64/199 (32%), Positives = 112/199 (56%)

Query: 449 AMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIA 508
           A+++  +M   G+ PD FTY+ +++   KAG  +AA Q+F EM N+GC PN+ T+N +I 
Sbjct: 88  ALELKNQMVEKGIKPDVFTYTTLLSGFEKAGKDKAAVQIFEEMRNEGCKPNICTFNALIK 147

Query: 509 LQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVP 568
           +      +   +K++ D++     PD VT++ ++ V G  G   E   VF EM+R  +VP
Sbjct: 148 MHGNRGKFTEMMKVFEDIKTFQCSPDIVTWNTLLSVFGQNGMDSEVSGVFKEMKRAGFVP 207

Query: 569 DEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLL 628
           +   +  L+  + + G+  +A   Y+ ML+AG+ P++ + N++L+A  R G    +  +L
Sbjct: 208 ERDTFNTLISSYSRCGSFDQAMAVYKRMLEAGVNPDLSSYNAVLAALARGGLWKQSEKVL 267

Query: 629 QGMLNLGLKPSLQTYTLLL 647
             M +   KP+  TY  LL
Sbjct: 268 AEMKDGRCKPNELTYCSLL 286



 Score =  128 bits (322), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 77/302 (25%), Positives = 139/302 (46%), Gaps = 35/302 (11%)

Query: 381 KLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIH 440
           +L +QMV  G +P+V TY  L+  + +A     A+ +F++M+  GC+P+  T+  LI +H
Sbjct: 90  ELKNQMVEKGIKPDVFTYTTLLSGFEKAGKDKAAVQIFEEMRNEGCKPNICTFNALIKMH 149

Query: 441 AKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNL 500
              G     M +++ ++    SPD  T++ +++  G+ G       +F EM   G +P  
Sbjct: 150 GNRGKFTEMMKVFEDIKTFQCSPDIVTWNTLLSVFGQNGMDSEVSGVFKEMKRAGFVPER 209

Query: 501 VTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAE 560
            T+N +I+  ++  ++  A+ +Y+ M  AG  PD  +Y+ V+  L   G   ++E V AE
Sbjct: 210 DTFNTLISSYSRCGSFDQAMAVYKRMLEAGVNPDLSSYNAVLAALARGGLWKQSEKVLAE 269

Query: 561 MRRKNWVPDEPVYGLLVDLWGKAGNVRK----AWEWYEAML------------------- 597
           M+     P+E  Y  L+  +     + +    A E Y  ++                   
Sbjct: 270 MKDGRCKPNELTYCSLLHAYANGKEIERMCALAEEIYSGIIEPRAVLLKTLVLVNSKCDL 329

Query: 598 ------------QAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTL 645
                       Q G  P++ T N+++S + R   ++ A  +L  M   G  PSL TY  
Sbjct: 330 LMETERAFLELRQRGFSPDITTLNAMVSIYGRRQMVAKANEILDCMKRGGFTPSLTTYNS 389

Query: 646 LL 647
           L+
Sbjct: 390 LM 391



 Score =  114 bits (284), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 64/290 (22%), Positives = 135/290 (46%)

Query: 359 DEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVF 418
           D  T+ T++ + G+      ++ +  +M R G  P   T+N LI SY R    ++A+ V+
Sbjct: 173 DIVTWNTLLSVFGQNGMDSEVSGVFKEMKRAGFVPERDTFNTLISSYSRCGSFDQAMAVY 232

Query: 419 KQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKA 478
           K+M   G  PD  +Y  ++   A+ G    +  +  +M+     P+  TY  +++     
Sbjct: 233 KRMLEAGVNPDLSSYNAVLAALARGGLWKQSEKVLAEMKDGRCKPNELTYCSLLHAYANG 292

Query: 479 GHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTY 538
             ++    L  E+ +    P  V    ++ + +K        + + +++  GF PD  T 
Sbjct: 293 KEIERMCALAEEIYSGIIEPRAVLLKTLVLVNSKCDLLMETERAFLELRQRGFSPDITTL 352

Query: 539 SIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQ 598
           + ++ + G    + +A  +   M+R  + P    Y  L+ ++ ++ N  ++ E    +L 
Sbjct: 353 NAMVSIYGRRQMVAKANEILDCMKRGGFTPSLTTYNSLMYMYSRSANFERSEEILREILA 412

Query: 599 AGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
            G+RP++ + N+++ A+ R G++ DA  +L  M   G  P + TY   ++
Sbjct: 413 KGIRPDIISYNTVIYAYCRNGRMRDASRVLSEMRESGPAPDIITYNTFIA 462



 Score =  112 bits (279), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 64/299 (21%), Positives = 138/299 (46%), Gaps = 1/299 (0%)

Query: 345 GFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHS 404
           G F  ++R AGF  +  T+ T++    R   F     +  +M+  G  P++ +YN ++ +
Sbjct: 195 GVFKEMKR-AGFVPERDTFNTLISSYSRCGSFDQAMAVYKRMLEAGVNPDLSSYNAVLAA 253

Query: 405 YGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPD 464
             R     ++  V  +M+   C+P+ +TYC+L+  +A    ++    + +++ +  + P 
Sbjct: 254 LARGGLWKQSEKVLAEMKDGRCKPNELTYCSLLHAYANGKEIERMCALAEEIYSGIIEPR 313

Query: 465 TFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYR 524
                 ++    K   L    + F E+  +G  P++ T N M+++  + +    A ++  
Sbjct: 314 AVLLKTLVLVNSKCDLLMETERAFLELRQRGFSPDITTLNAMVSIYGRRQMVAKANEILD 373

Query: 525 DMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAG 584
            M+  GF P   TY+ +M +       + +E +  E+  K   PD   Y  ++  + + G
Sbjct: 374 CMKRGGFTPSLTTYNSLMYMYSRSANFERSEEILREILAKGIRPDIISYNTVIYAYCRNG 433

Query: 585 NVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTY 643
            +R A      M ++G  P++ T N+ ++++       +A  ++  M+  G KP+  TY
Sbjct: 434 RMRDASRVLSEMRESGPAPDIITYNTFIASYAADSMFVEAIDVVCYMIKHGCKPNQSTY 492



 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 60/241 (24%), Positives = 118/241 (48%), Gaps = 3/241 (1%)

Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
           +AL++  QM   G +PD  TY TL+    KAG    A+ ++++M+  G  P+  T++ +I
Sbjct: 87  DALELKNQMVEKGIKPDVFTYTTLLSGFEKAGKDKAAVQIFEEMRNEGCKPNICTFNALI 146

Query: 473 NCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFE 532
              G  G      ++F ++    C P++VT+N ++++  +         ++++M+ AGF 
Sbjct: 147 KMHGNRGKFTEMMKVFEDIKTFQCSPDIVTWNTLLSVFGQNGMDSEVSGVFKEMKRAGFV 206

Query: 533 PDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEW 592
           P++ T++ ++     CG  D+A AV+  M      PD   Y  ++    + G  +++ + 
Sbjct: 207 PERDTFNTLISSYSRCGSFDQAMAVYKRMLEAGVNPDLSSYNAVLAALARGGLWKQSEKV 266

Query: 593 YEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPS---LQTYTLLLSC 649
              M     +PN  T  SLL A+    ++     L + + +  ++P    L+T  L+ S 
Sbjct: 267 LAEMKDGRCKPNELTYCSLLHAYANGKEIERMCALAEEIYSGIIEPRAVLLKTLVLVNSK 326

Query: 650 C 650
           C
Sbjct: 327 C 327


>gi|145336957|ref|NP_176459.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75206054|sp|Q9SI78.1|PPR93_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g62720
 gi|6630449|gb|AAF19537.1|AC007190_5 F23N19.8 [Arabidopsis thaliana]
 gi|62320514|dbj|BAD95075.1| PPR-repeat protein [Arabidopsis thaliana]
 gi|332195876|gb|AEE33997.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 485

 Score =  153 bits (387), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 93/317 (29%), Positives = 163/317 (51%), Gaps = 24/317 (7%)

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAIN---KLLDQMVRDGCQPNVVTYNRLIHSYGRAN 409
           + GF+ D   Y T   I+  + + G +N   +L D+M RDG + + VTYN L+     + 
Sbjct: 167 EMGFRPDVVIYNT---IIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSG 223

Query: 410 YLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYS 469
             ++A  + + M +    P+ +T+  +ID+  K G    AM +Y++M    + PD FTY+
Sbjct: 224 RWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYN 283

Query: 470 VIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNA 529
            +IN L   G +  A Q+   MV +GC+P++VTYN +I    K++      KL+R+M   
Sbjct: 284 SLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQR 343

Query: 530 GFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGN--VR 587
           G   D +TY+ +++     G  D A+ +F+ M  +   P+   Y +L  L+G   N  V 
Sbjct: 344 GLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDSR---PNIRTYSIL--LYGLCMNWRVE 398

Query: 588 KAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
           KA   +E M ++ +  ++ T N ++    ++G + DA+ L + +   GLKP + +YT ++
Sbjct: 399 KALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMI 458

Query: 648 SCCTEARSPYDMGFCHE 664
           S           GFC +
Sbjct: 459 S-----------GFCRK 464



 Score =  149 bits (376), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 82/294 (27%), Positives = 161/294 (54%), Gaps = 3/294 (1%)

Query: 354 AGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNE 413
            G  HD ++Y  ++  L R  +F     ++ +M++ G +P+VVT + LI+ + + N + +
Sbjct: 98  CGIGHDLYSYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFD 157

Query: 414 ALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIIN 473
           A+D+  +M+ +G  PD V Y T+ID   K G ++ A++++ +M+  G+  D  TY+ ++ 
Sbjct: 158 AIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVA 217

Query: 474 CLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEP 533
            L  +G    A +L  +MV +  +PN++T+  +I +  K   +  A+KLY +M     +P
Sbjct: 218 GLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDP 277

Query: 534 DKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWY 593
           D  TY+ ++  L   G +DEA+ +   M  K  +PD   Y  L++ + K+  V +  + +
Sbjct: 278 DVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLF 337

Query: 594 EAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
             M Q GL  +  T N+++  + + G+   A  +   M +   +P+++TY++LL
Sbjct: 338 REMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDS---RPNIRTYSILL 388



 Score =  118 bits (295), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 79/294 (26%), Positives = 140/294 (47%)

Query: 363 YTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQ 422
           ++ ++  + +++ +  +  L   M   G   ++ +YN +I+   R +    AL V  +M 
Sbjct: 72  FSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSVVGKMM 131

Query: 423 VVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQ 482
             G EPD VT  +LI+   +   +  A+D+  KM+  G  PD   Y+ II+   K G + 
Sbjct: 132 KFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVN 191

Query: 483 AAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVM 542
            A +LF  M   G   + VTYN ++A    +  +  A +L RDM      P+ +T++ V+
Sbjct: 192 DAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVI 251

Query: 543 EVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLR 602
           +V    G   EA  ++ EM R+   PD   Y  L++     G V +A +  + M+  G  
Sbjct: 252 DVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCL 311

Query: 603 PNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSP 656
           P+V T N+L++ F +  ++ +   L + M   GL     TY  ++    +A  P
Sbjct: 312 PDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRP 365



 Score =  109 bits (272), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 67/267 (25%), Positives = 130/267 (48%)

Query: 382 LLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHA 441
           L  +M++    P++V +++++    ++   +  + +F  M+V G   D  +Y  +I+   
Sbjct: 56  LFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLC 115

Query: 442 KAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLV 501
           +     +A+ +  KM   G  PD  T S +IN   +   +  A  L  +M   G  P++V
Sbjct: 116 RCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVV 175

Query: 502 TYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEM 561
            YN +I    K      A++L+  M+  G   D VTY+ ++  L   G   +A  +  +M
Sbjct: 176 IYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDM 235

Query: 562 RRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQL 621
             ++ VP+   +  ++D++ K G   +A + YE M +  + P+V T NSL++     G++
Sbjct: 236 VMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRV 295

Query: 622 SDAYHLLQGMLNLGLKPSLQTYTLLLS 648
            +A  +L  M+  G  P + TY  L++
Sbjct: 296 DEAKQMLDLMVTKGCLPDVVTYNTLIN 322



 Score = 90.5 bits (223), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 56/207 (27%), Positives = 99/207 (47%), Gaps = 32/207 (15%)

Query: 359 DEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVF 418
           D  TY +++  L    +     ++LD MV  GC P+VVTYN LI+ + ++  ++E   +F
Sbjct: 278 DVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLF 337

Query: 419 KQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKM---------------------- 456
           ++M   G   D +TY T+I  + +AG  D A +++ +M                      
Sbjct: 338 REMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDSRPNIRTYSILLYGLCMNWRV 397

Query: 457 ----------QAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIM 506
                     Q + +  D  TY+++I+ + K G+++ A  LF  +  +G  P++V+Y  M
Sbjct: 398 EKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTM 457

Query: 507 IALQAKARNYQSALKLYRDMQNAGFEP 533
           I+   + R +  +  LYR MQ  G  P
Sbjct: 458 ISGFCRKRQWDKSDLLYRKMQEDGLLP 484



 Score = 80.9 bits (198), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 45/174 (25%), Positives = 88/174 (50%), Gaps = 2/174 (1%)

Query: 480 HLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYS 539
           +L+    LFC+M+    +P++V ++ +++  AK++NY   + L+  M+  G   D  +Y+
Sbjct: 49  NLEEEIDLFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYN 108

Query: 540 IVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQA 599
           IV+  L  C     A +V  +M +  + PD      L++ + +   V  A +    M + 
Sbjct: 109 IVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEM 168

Query: 600 GLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS--CCT 651
           G RP+V   N+++    ++G ++DA  L   M   G++    TY  L++  CC+
Sbjct: 169 GFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCS 222



 Score = 80.5 bits (197), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 53/202 (26%), Positives = 100/202 (49%)

Query: 446 LDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNI 505
           L+  +D++ KM  +   P    +S +++ + K+ +      LF  M   G   +L +YNI
Sbjct: 50  LEEEIDLFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNI 109

Query: 506 MIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKN 565
           +I    +   +  AL +   M   G+EPD VT S ++        + +A  + ++M    
Sbjct: 110 VINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMG 169

Query: 566 WVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAY 625
           + PD  +Y  ++D   K G V  A E ++ M + G+R +  T NSL++     G+ SDA 
Sbjct: 170 FRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAA 229

Query: 626 HLLQGMLNLGLKPSLQTYTLLL 647
            L++ M+   + P++ T+T ++
Sbjct: 230 RLMRDMVMRDIVPNVITFTAVI 251


>gi|302786806|ref|XP_002975174.1| hypothetical protein SELMODRAFT_10825 [Selaginella moellendorffii]
 gi|300157333|gb|EFJ23959.1| hypothetical protein SELMODRAFT_10825 [Selaginella moellendorffii]
          Length = 555

 Score =  153 bits (387), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 137/559 (24%), Positives = 234/559 (41%), Gaps = 55/559 (9%)

Query: 333 VLKQLQDHTVALGFFNWLR-RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGC 391
           VL  ++D   AL FF W R R+   +     Y  M+ +L    Q+    +LL +M+ +  
Sbjct: 1   VLGGMRDWKEALDFFRWARSRRDVCEITVFAYNMMLKLLRDGEQWSLSEELLKEMLEERI 60

Query: 392 QPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMD 451
            P+  T++  +    R +   +A+  F +++  G   D VTY  +ID++ KAG    AMD
Sbjct: 61  MPDNYTFSIFVSCSKRCDQAEDAIAWFHRLRETGVSFDGVTYSAMIDLYGKAGRTAEAMD 120

Query: 452 MYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQA 511
           +Y+ M+     PD  ++ VI N   + G  QA  +LF +M      PN+V +N +I    
Sbjct: 121 LYQTMRKNNWKPDLVSFGVIANVYSRVGDYQAILRLFRDMEQAEIKPNVVLFNTLIGTLG 180

Query: 512 KARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEP 571
           +A     A  ++ +M + G EP ++T SI++++    G LD+A  V+  +++K W  D  
Sbjct: 181 RAGKVTLAKGMFDEMASYGLEPSEITLSILIDMYTKVGALDKALDVYDTIKQKKWKLDVL 240

Query: 572 VYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGM 631
           VY  L+    ++GN+++A      M +    P+  T   L++ +   G +++   +   +
Sbjct: 241 VYNTLLKSCVESGNIQRAESLIAEMEREKQWPDHMTYGILMNVYATKGMVAEVRAMFDKL 300

Query: 632 LNLGLKPSLQTYTLLLSCCTEA----RSPYDMGFCHELMA--------VSG--------- 670
            NL + P    YT+L+    +A    R P   G   E++A        +SG         
Sbjct: 301 KNLAVFPKAAFYTMLIKASKQAGDFDRIP---GIFDEMIANGCSVNERMSGMLVSCASSS 357

Query: 671 ---------------------HPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRESK 709
                                H     LL +     D  ++      FL  +      S+
Sbjct: 358 QISDETRLGVLECVKKIKPRLHELLSRLLVLAKEDDDFDDIASETTEFL--LREITAPSR 415

Query: 710 RGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAVKEKGMSYWLINLHVMSDGTAVIA 769
           R + +AV+DF    G +  A ++        +Y   +     S W +NL  +S   A  A
Sbjct: 416 RPMCNAVIDFCCVLGSRNAARAILSSGVSAGLY-HGLHTTLPSLWQLNLRTLSFAAAECA 474

Query: 770 LSRTLAWFRKQMLISGVG---PSRIDIVTGWGRRSRVTGTSLVRQAVQELLHMFSFPFFT 826
           L    AW       +  G   P  + + TG GR    T +  + + V  +L     PF  
Sbjct: 475 LE---AWIESLATAAENGDEFPEDLMVETGTGRAKEATNSVSLSEFVGGVLKGMDSPFEE 531

Query: 827 ENGNSGCFVGCGEPLNKWL 845
                G F+  GE    WL
Sbjct: 532 NRRPGGYFIASGEAAKAWL 550


>gi|224092436|ref|XP_002309609.1| predicted protein [Populus trichocarpa]
 gi|222855585|gb|EEE93132.1| predicted protein [Populus trichocarpa]
          Length = 841

 Score =  153 bits (387), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 94/313 (30%), Positives = 158/313 (50%), Gaps = 11/313 (3%)

Query: 336 QLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNV 395
           +L D  VA G  N             TY +++  L +  +      + ++MVR G +P+V
Sbjct: 420 KLFDEAVACGIANVF-----------TYNSLLSWLCKEGKMSEACSIWEKMVRKGVRPSV 468

Query: 396 VTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKK 455
           V+YN +I  + +   ++ A  VF +M   G +P+ +TY  L+D + K G  + A  +Y +
Sbjct: 469 VSYNNMILGHCQQGDMDSANGVFVEMLEKGLKPNLITYSVLMDGYFKKGDTEYAFGLYDR 528

Query: 456 MQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARN 515
           M+   ++P  FT ++IIN L KAG    +     ++V +G IP  +TYN +I    K  +
Sbjct: 529 MRGENIAPSDFTCNIIINGLCKAGRTSESQDRLKKLVQEGFIPTCMTYNCIIDGFVKEGS 588

Query: 516 YQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGL 575
             SAL +Y +M   G  P+  TY+ ++        +D A  V  EM+ K    D  VY  
Sbjct: 589 VNSALAVYTEMCKIGVSPNVFTYTNLINGFCKSNNMDLALKVMDEMKNKGIELDVTVYCA 648

Query: 576 LVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLG 635
           L+D + + G++  A +    + + GL PN    +S++S F ++  +  A HL + M+N G
Sbjct: 649 LIDGFCRKGDMVNASQLLSELQEVGLSPNKVVYSSMISGFRKLQNMEAALHLHKRMINEG 708

Query: 636 LKPSLQTYTLLLS 648
           +   LQ YT L+S
Sbjct: 709 IPCDLQIYTTLIS 721



 Score =  139 bits (349), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 88/310 (28%), Positives = 153/310 (49%), Gaps = 1/310 (0%)

Query: 339 DHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTY 398
           D   A G ++ +R +      + T   ++  L +A +       L ++V++G  P  +TY
Sbjct: 518 DTEYAFGLYDRMRGE-NIAPSDFTCNIIINGLCKAGRTSESQDRLKKLVQEGFIPTCMTY 576

Query: 399 NRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQA 458
           N +I  + +   +N AL V+ +M  +G  P+  TY  LI+   K+  +D+A+ +  +M+ 
Sbjct: 577 NCIIDGFVKEGSVNSALAVYTEMCKIGVSPNVFTYTNLINGFCKSNNMDLALKVMDEMKN 636

Query: 459 AGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQS 518
            G+  D   Y  +I+   + G +  A QL  E+   G  PN V Y+ MI+   K +N ++
Sbjct: 637 KGIELDVTVYCALIDGFCRKGDMVNASQLLSELQEVGLSPNKVVYSSMISGFRKLQNMEA 696

Query: 519 ALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVD 578
           AL L++ M N G   D   Y+ ++  L   G L  A  ++AEM  K  +PD   Y +L+ 
Sbjct: 697 ALHLHKRMINEGIPCDLQIYTTLISGLLKEGKLLFASELYAEMLAKGIMPDLITYSVLIH 756

Query: 579 LWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKP 638
                G +  A +  E M +  + P V   N+L++   + G L +A+ L   ML+ GL P
Sbjct: 757 GLCNKGQLENAQKILEDMDRKCMTPTVFIYNTLITGHFKEGNLQEAFRLHNEMLDKGLVP 816

Query: 639 SLQTYTLLLS 648
              TY +L++
Sbjct: 817 DDTTYDILVN 826



 Score =  134 bits (338), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 85/272 (31%), Positives = 141/272 (51%), Gaps = 6/272 (2%)

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLL---DQMVRDGCQPNVVTYNRLIHSYGRAN 409
           Q GF     TY  ++   G  ++ G++N  L    +M + G  PNV TY  LI+ + ++N
Sbjct: 566 QEGFIPTCMTYNCIID--GFVKE-GSVNSALAVYTEMCKIGVSPNVFTYTNLINGFCKSN 622

Query: 410 YLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYS 469
            ++ AL V  +M+  G E D   YC LID   + G +  A  +  ++Q  GLSP+   YS
Sbjct: 623 NMDLALKVMDEMKNKGIELDVTVYCALIDGFCRKGDMVNASQLLSELQEVGLSPNKVVYS 682

Query: 470 VIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNA 529
            +I+   K  +++AA  L   M+N+G   +L  Y  +I+   K      A +LY +M   
Sbjct: 683 SMISGFRKLQNMEAALHLHKRMINEGIPCDLQIYTTLISGLLKEGKLLFASELYAEMLAK 742

Query: 530 GFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKA 589
           G  PD +TYS+++  L + G L+ A+ +  +M RK   P   +Y  L+    K GN+++A
Sbjct: 743 GIMPDLITYSVLIHGLCNKGQLENAQKILEDMDRKCMTPTVFIYNTLITGHFKEGNLQEA 802

Query: 590 WEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQL 621
           +  +  ML  GL P+  T + L++  ++ G L
Sbjct: 803 FRLHNEMLDKGLVPDDTTYDILVNGKVKDGNL 834



 Score =  123 bits (308), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 81/297 (27%), Positives = 143/297 (48%), Gaps = 4/297 (1%)

Query: 353 QAGFKHDEHTYTTMVGILGRARQ--FGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANY 410
           + G +    +Y  M  ILG  +Q    + N +  +M+  G +PN++TY+ L+  Y +   
Sbjct: 461 RKGVRPSVVSYNNM--ILGHCQQGDMDSANGVFVEMLEKGLKPNLITYSVLMDGYFKKGD 518

Query: 411 LNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSV 470
              A  ++ +M+     P   T   +I+   KAG    + D  KK+   G  P   TY+ 
Sbjct: 519 TEYAFGLYDRMRGENIAPSDFTCNIIINGLCKAGRTSESQDRLKKLVQEGFIPTCMTYNC 578

Query: 471 IINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAG 530
           II+   K G + +A  ++ EM   G  PN+ TY  +I    K+ N   ALK+  +M+N G
Sbjct: 579 IIDGFVKEGSVNSALAVYTEMCKIGVSPNVFTYTNLINGFCKSNNMDLALKVMDEMKNKG 638

Query: 531 FEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAW 590
            E D   Y  +++     G +  A  + +E++     P++ VY  ++  + K  N+  A 
Sbjct: 639 IELDVTVYCALIDGFCRKGDMVNASQLLSELQEVGLSPNKVVYSSMISGFRKLQNMEAAL 698

Query: 591 EWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
             ++ M+  G+  ++    +L+S  L+ G+L  A  L   ML  G+ P L TY++L+
Sbjct: 699 HLHKRMINEGIPCDLQIYTTLISGLLKEGKLLFASELYAEMLAKGIMPDLITYSVLI 755



 Score =  108 bits (270), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 115/477 (24%), Positives = 197/477 (41%), Gaps = 77/477 (16%)

Query: 312 PLAEEALGNTNY-------SMDAYQA-----NQVLKQLQDHTVALGFFNWLRRQAGFKHD 359
           PL++    NTN+       S D++       + +L    D   AL +F W  ++ G    
Sbjct: 38  PLSQNPHPNTNFPGKSAPTSQDSFLTQTQYIDTLLNHQNDPQSALSYFTWASQKRGLIKS 97

Query: 360 EHTYTTMVGILGRARQ-FGAINKLLDQMVRD--GCQPNVVT------------------Y 398
                 ++ IL ++ +  G    LL++   D  G  P+VV                   +
Sbjct: 98  VDALCVLLHILTKSTETCGKARNLLNRFASDDWGPVPSVVVARLIESSRRLDFESDSRVF 157

Query: 399 NRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIH----AKAGFLDVAMDMYK 454
           N L++SY +   +N+A+D F  +     E D V   T+++I      K   +  A D+Y 
Sbjct: 158 NYLLNSYVKTKRINDAVDCFNSL----IEKDIVPCLTVMNIFLSELVKNNMIREARDVYN 213

Query: 455 KMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKAR 514
           KM + G+  D  T SV+I    + G L+ A   F E  N+G   +   Y+I+I    K  
Sbjct: 214 KMASKGVKGDCATISVMIRASMREGKLEEAEGWFREAKNKGVELDARAYSIVIEAVCKKP 273

Query: 515 NYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYG 574
           +  +AL L R+M++ G+ P +V ++ V+ V    G + EA  V  EM       +  V  
Sbjct: 274 DSVAALGLLREMRDKGWVPHEVIFTRVIGVCMKQGKMLEAVKVKGEMLSCGKPMNVVVAT 333

Query: 575 LLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNL 634
            L+  + K G++  A E ++ M + G+ PN  T   ++    + G +  AY +   M N 
Sbjct: 334 TLMKGYCKQGDLDSALELFDKMNENGICPNNVTYAVIIEWCCKNGNMDKAYEIYNQMKNK 393

Query: 635 GLKPSLQTYTLLLSCCTEARSPYDMGFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHV 694
            + P++     L+    +ARSP +     +  AV+   A++F                  
Sbjct: 394 DISPTVFNVNSLIRGYLKARSPEEASKLFD-EAVACGIANVFTY---------------- 436

Query: 695 GSFLEMMHSEDRESKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAVKEKGM 751
                              ++++ +L K G   EA S+WE   +K V P  V    M
Sbjct: 437 -------------------NSLLSWLCKEGKMSEACSIWEKMVRKGVRPSVVSYNNM 474



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 50/194 (25%), Positives = 90/194 (46%), Gaps = 14/194 (7%)

Query: 326 DAYQANQVLKQLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQ 385
           D   A+Q+L +LQ              + G   ++  Y++M+    + +   A   L  +
Sbjct: 658 DMVNASQLLSELQ--------------EVGLSPNKVVYSSMISGFRKLQNMEAALHLHKR 703

Query: 386 MVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGF 445
           M+ +G   ++  Y  LI    +   L  A +++ +M   G  PD +TY  LI      G 
Sbjct: 704 MINEGIPCDLQIYTTLISGLLKEGKLLFASELYAEMLAKGIMPDLITYSVLIHGLCNKGQ 763

Query: 446 LDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNI 505
           L+ A  + + M    ++P  F Y+ +I    K G+LQ A +L  EM+++G +P+  TY+I
Sbjct: 764 LENAQKILEDMDRKCMTPTVFIYNTLITGHFKEGNLQEAFRLHNEMLDKGLVPDDTTYDI 823

Query: 506 MIALQAKARNYQSA 519
           ++  + K  N  S 
Sbjct: 824 LVNGKVKDGNLFSG 837


>gi|449523421|ref|XP_004168722.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
           mitochondrial-like [Cucumis sativus]
          Length = 628

 Score =  153 bits (386), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 84/306 (27%), Positives = 152/306 (49%), Gaps = 4/306 (1%)

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
           Q G +     Y T++            +   D+M++ G  P + TYN LIH+       +
Sbjct: 319 QKGLRPSAVIYNTLIDGFCNKGNLDMASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTD 378

Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
           EA  + K++Q  G  PD +TY  LI+ + +      A  ++ +M A+G+ P   TY+ ++
Sbjct: 379 EAECMIKEIQEKGISPDAITYNILINGYCRCANAKKAFLLHDEMLASGIKPTKKTYTSLL 438

Query: 473 NCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFE 532
           + L K   ++ A  LF ++ ++G +P+ + +N +I       N + A +L +DM      
Sbjct: 439 HVLSKKNRMKEADDLFKKITSEGVLPDAIMFNALIDGHCSNSNVKGAFELLKDMDRMKVP 498

Query: 533 PDKVTYSIVMEVLGHC--GYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAW 590
           PD+VT++ +M+  GHC  G ++EA  +F EM+R+   PD   +  L+  + + G+++ A+
Sbjct: 499 PDEVTFNTIMQ--GHCREGKVEEARELFDEMKRRGIKPDHISFNTLISGYSRRGDIKDAF 556

Query: 591 EWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCC 650
                ML  G  P V T N+L+    +  +   A  LL+ M++ G+ P   TY  L+   
Sbjct: 557 RVRNEMLDTGFNPTVLTYNALVQGLCKNQEGDLAEELLKEMVSKGMTPDDTTYFTLIEGI 616

Query: 651 TEARSP 656
            +   P
Sbjct: 617 AKVNIP 622



 Score =  135 bits (340), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 85/295 (28%), Positives = 145/295 (49%)

Query: 354 AGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNE 413
           +G K +  TY T+V     + +  A + +L  M R   +P+  TY  LI    +   L E
Sbjct: 250 SGVKPNIVTYNTIVHGYCSSGRVEAADAILTTMKRQKIEPDSFTYGSLISGMCKQGRLEE 309

Query: 414 ALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIIN 473
           A  +F++M   G  P  V Y TLID     G LD+A     +M   G+SP   TY+ +I+
Sbjct: 310 ASKIFEEMVQKGLRPSAVIYNTLIDGFCNKGNLDMASAYKDEMLKKGISPTMSTYNSLIH 369

Query: 474 CLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEP 533
            L        A  +  E+  +G  P+ +TYNI+I    +  N + A  L+ +M  +G +P
Sbjct: 370 ALFMEQRTDEAECMIKEIQEKGISPDAITYNILINGYCRCANAKKAFLLHDEMLASGIKP 429

Query: 534 DKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWY 593
            K TY+ ++ VL     + EA+ +F ++  +  +PD  ++  L+D      NV+ A+E  
Sbjct: 430 TKKTYTSLLHVLSKKNRMKEADDLFKKITSEGVLPDAIMFNALIDGHCSNSNVKGAFELL 489

Query: 594 EAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
           + M +  + P+  T N+++    R G++ +A  L   M   G+KP   ++  L+S
Sbjct: 490 KDMDRMKVPPDEVTFNTIMQGHCREGKVEEARELFDEMKRRGIKPDHISFNTLIS 544



 Score =  126 bits (317), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 74/266 (27%), Positives = 133/266 (50%)

Query: 382 LLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHA 441
           L  +M R   + +V T+N +I+   +   L +A D    M+  G +P+ VTY T++  + 
Sbjct: 208 LYAEMFRLRIKSSVYTFNIMINVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHGYC 267

Query: 442 KAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLV 501
            +G ++ A  +   M+   + PD+FTY  +I+ + K G L+ A ++F EMV +G  P+ V
Sbjct: 268 SSGRVEAADAILTTMKRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAV 327

Query: 502 TYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEM 561
            YN +I       N   A     +M   G  P   TY+ ++  L      DEAE +  E+
Sbjct: 328 IYNTLIDGFCNKGNLDMASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEI 387

Query: 562 RRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQL 621
           + K   PD   Y +L++ + +  N +KA+  ++ ML +G++P   T  SLL    +  ++
Sbjct: 388 QEKGISPDAITYNILINGYCRCANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRM 447

Query: 622 SDAYHLLQGMLNLGLKPSLQTYTLLL 647
            +A  L + + + G+ P    +  L+
Sbjct: 448 KEADDLFKKITSEGVLPDAIMFNALI 473



 Score =  120 bits (301), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 76/278 (27%), Positives = 132/278 (47%), Gaps = 6/278 (2%)

Query: 396 VTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKK 455
           + ++ LI S    N  +EA + F  M+  G  P   T  +L+ +  K    + A  +Y +
Sbjct: 152 IVFDYLIKSCCDMNRADEAFECFYTMKEKGVLPTIETCNSLLSLFLKLNRTEAAWVLYAE 211

Query: 456 MQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARN 515
           M    +    +T++++IN L K G L+ A      M   G  PN+VTYN ++     +  
Sbjct: 212 MFRLRIKSSVYTFNIMINVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHGYCSSGR 271

Query: 516 YQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGL 575
            ++A  +   M+    EPD  TY  ++  +   G L+EA  +F EM +K   P   +Y  
Sbjct: 272 VEAADAILTTMKRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNT 331

Query: 576 LVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLG 635
           L+D +   GN+  A  + + ML+ G+ P + T NSL+ A     +  +A  +++ +   G
Sbjct: 332 LIDGFCNKGNLDMASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKG 391

Query: 636 LKPSLQTYTLLLS--C-CTEARSPYDMGFCHELMAVSG 670
           + P   TY +L++  C C  A+  +     H+ M  SG
Sbjct: 392 ISPDAITYNILINGYCRCANAKKAF---LLHDEMLASG 426



 Score =  111 bits (278), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 63/232 (27%), Positives = 113/232 (48%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           ++ G   D  TY  ++    R         L D+M+  G +P   TY  L+H   + N +
Sbjct: 388 QEKGISPDAITYNILINGYCRCANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRM 447

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
            EA D+FK++   G  PD + +  LID H     +  A ++ K M    + PD  T++ I
Sbjct: 448 KEADDLFKKITSEGVLPDAIMFNALIDGHCSNSNVKGAFELLKDMDRMKVPPDEVTFNTI 507

Query: 472 INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF 531
           +    + G ++ A +LF EM  +G  P+ +++N +I+  ++  + + A ++  +M + GF
Sbjct: 508 MQGHCREGKVEEARELFDEMKRRGIKPDHISFNTLISGYSRRGDIKDAFRVRNEMLDTGF 567

Query: 532 EPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKA 583
            P  +TY+ +++ L      D AE +  EM  K   PD+  Y  L++   K 
Sbjct: 568 NPTVLTYNALVQGLCKNQEGDLAEELLKEMVSKGMTPDDTTYFTLIEGIAKV 619



 Score =  106 bits (265), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 69/262 (26%), Positives = 120/262 (45%)

Query: 386 MVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGF 445
           M   G  P + T N L+  + + N    A  ++ +M  +  +    T+  +I++  K G 
Sbjct: 177 MKEKGVLPTIETCNSLLSLFLKLNRTEAAWVLYAEMFRLRIKSSVYTFNIMINVLCKEGK 236

Query: 446 LDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNI 505
           L  A D    M+ +G+ P+  TY+ I++    +G ++AA  +   M  Q   P+  TY  
Sbjct: 237 LKKAKDFVGHMETSGVKPNIVTYNTIVHGYCSSGRVEAADAILTTMKRQKIEPDSFTYGS 296

Query: 506 MIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKN 565
           +I+   K    + A K++ +M   G  P  V Y+ +++   + G LD A A   EM +K 
Sbjct: 297 LISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNTLIDGFCNKGNLDMASAYKDEMLKKG 356

Query: 566 WVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAY 625
             P    Y  L+          +A    + + + G+ P+  T N L++ + R      A+
Sbjct: 357 ISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKGISPDAITYNILINGYCRCANAKKAF 416

Query: 626 HLLQGMLNLGLKPSLQTYTLLL 647
            L   ML  G+KP+ +TYT LL
Sbjct: 417 LLHDEMLASGIKPTKKTYTSLL 438



 Score =  100 bits (248), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 49/200 (24%), Positives = 106/200 (53%)

Query: 354 AGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNE 413
           +G K  + TYT+++ +L +  +    + L  ++  +G  P+ + +N LI  +   + +  
Sbjct: 425 SGIKPTKKTYTSLLHVLSKKNRMKEADDLFKKITSEGVLPDAIMFNALIDGHCSNSNVKG 484

Query: 414 ALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIIN 473
           A ++ K M  +   PD VT+ T++  H + G ++ A +++ +M+  G+ PD  +++ +I+
Sbjct: 485 AFELLKDMDRMKVPPDEVTFNTIMQGHCREGKVEEARELFDEMKRRGIKPDHISFNTLIS 544

Query: 474 CLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEP 533
              + G ++ A ++  EM++ G  P ++TYN ++    K +    A +L ++M + G  P
Sbjct: 545 GYSRRGDIKDAFRVRNEMLDTGFNPTVLTYNALVQGLCKNQEGDLAEELLKEMVSKGMTP 604

Query: 534 DKVTYSIVMEVLGHCGYLDE 553
           D  TY  ++E +      DE
Sbjct: 605 DDTTYFTLIEGIAKVNIPDE 624



 Score = 69.7 bits (169), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 69/331 (20%), Positives = 133/331 (40%), Gaps = 53/331 (16%)

Query: 466 FTYSVIINCLGKA----GHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALK 521
           F  S++ + L K+         A + F  M  +G +P + T N +++L  K    ++A  
Sbjct: 148 FKSSIVFDYLIKSCCDMNRADEAFECFYTMKEKGVLPTIETCNSLLSLFLKLNRTEAAWV 207

Query: 522 LYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWG 581
           LY +M     +    T++I++ VL   G L +A+     M      P+   Y  +V  + 
Sbjct: 208 LYAEMFRLRIKSSVYTFNIMINVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHGYC 267

Query: 582 KAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQ 641
            +G V  A      M +  + P+  T  SL+S   + G+L +A  + + M+  GL+PS  
Sbjct: 268 SSGRVEAADAILTTMKRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAV 327

Query: 642 TYTLLLSCCTEARSPYDMGFCHE--LMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLE 699
            Y  L+            GFC++  L   S +   M            + +   + ++  
Sbjct: 328 IYNTLID-----------GFCNKGNLDMASAYKDEML----------KKGISPTMSTYNS 366

Query: 700 MMHSEDRESKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAVKEKGMSYWLINLH 759
           ++H+   E +                 +EA  + +   +K + PDA          I  +
Sbjct: 367 LIHALFMEQR----------------TDEAECMIKEIQEKGISPDA----------ITYN 400

Query: 760 VMSDGTAVIALSRTLAWFRKQMLISGVGPSR 790
           ++ +G    A ++       +ML SG+ P++
Sbjct: 401 ILINGYCRCANAKKAFLLHDEMLASGIKPTK 431



 Score = 48.5 bits (114), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 29/102 (28%), Positives = 50/102 (49%), Gaps = 1/102 (0%)

Query: 346 FFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSY 405
            F+ ++R+ G K D  ++ T++    R        ++ ++M+  G  P V+TYN L+   
Sbjct: 523 LFDEMKRR-GIKPDHISFNTLISGYSRRGDIKDAFRVRNEMLDTGFNPTVLTYNALVQGL 581

Query: 406 GRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLD 447
            +    + A ++ K+M   G  PD  TY TLI+  AK    D
Sbjct: 582 CKNQEGDLAEELLKEMVSKGMTPDDTTYFTLIEGIAKVNIPD 623


>gi|125564557|gb|EAZ09937.1| hypothetical protein OsI_32236 [Oryza sativa Indica Group]
          Length = 544

 Score =  153 bits (386), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 86/253 (33%), Positives = 135/253 (53%), Gaps = 3/253 (1%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           +QAG   + +TYT ++  + RA Q     +LL QM+  GC PN  T+N ++ ++ +A   
Sbjct: 277 QQAGVTPNVYTYTAVIDAMYRAGQVPRAQELLCQMIDSGCPPNTATFNAIMRAHVKAGRS 336

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGF--LDVAMDMYKKMQAAGLSPDTFTYS 469
            + L V  QM+ +GCEPD +TY  L++ H   G   LD AM M  +M A G  PD  T++
Sbjct: 337 EQVLQVHNQMRQLGCEPDIITYNFLMETHCGKGQSNLDAAMKMLTRMIAKGCIPDCHTFN 396

Query: 470 VIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNA 529
            ++  +   G++ AA +L+  M    C PN+VTYN+++ L    ++    L++ RDM   
Sbjct: 397 PMLKLVLVLGNVNAARKLYERMQELQCKPNVVTYNLLMRLFNLEKSMDMVLRIKRDMDAQ 456

Query: 530 GFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEM-RRKNWVPDEPVYGLLVDLWGKAGNVRK 588
           G EP+  TY+ ++E     G    A     EM   K   P +PVY +++ L  KAG +R+
Sbjct: 457 GVEPNVNTYAALIEAFCGRGNWKRAHMTLREMVEEKALKPTKPVYDMVLALLRKAGQLRR 516

Query: 589 AWEWYEAMLQAGL 601
             E  E M+  G 
Sbjct: 517 HEELVEMMVDRGF 529



 Score =  147 bits (370), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 92/324 (28%), Positives = 150/324 (46%), Gaps = 41/324 (12%)

Query: 363 YTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQ 422
           Y  M+ +L +   F     LLD+M       +      LI  Y RA   +EA D+F++M+
Sbjct: 148 YAAMIDLLAKHHHFPLARHLLDEMRERSVPISAQLILALIRRYVRAEMPSEASDLFRRME 207

Query: 423 VVGC-----------------------------------EPDRVTYCTLIDIHAKAGFLD 447
             G                                     PD V Y TL+    ++G LD
Sbjct: 208 EYGAGAPDPATLASLLGALSKKRLASEAQAMFDSYKSVFTPDVVLYTTLVHAWCRSGRLD 267

Query: 448 VAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMI 507
            A  ++ +MQ AG++P+ +TY+ +I+ + +AG +  A +L C+M++ GC PN  T+N ++
Sbjct: 268 EAERVFAEMQQAGVTPNVYTYTAVIDAMYRAGQVPRAQELLCQMIDSGCPPNTATFNAIM 327

Query: 508 ALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGY----LDEAEAVFAEMRR 563
               KA   +  L+++  M+  G EPD +TY+ +ME   HCG     LD A  +   M  
Sbjct: 328 RAHVKAGRSEQVLQVHNQMRQLGCEPDIITYNFLMET--HCGKGQSNLDAAMKMLTRMIA 385

Query: 564 KNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSD 623
           K  +PD   +  ++ L    GNV  A + YE M +   +PNV T N L+  F     +  
Sbjct: 386 KGCIPDCHTFNPMLKLVLVLGNVNAARKLYERMQELQCKPNVVTYNLLMRLFNLEKSMDM 445

Query: 624 AYHLLQGMLNLGLKPSLQTYTLLL 647
              + + M   G++P++ TY  L+
Sbjct: 446 VLRIKRDMDAQGVEPNVNTYAALI 469



 Score =  127 bits (319), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 78/284 (27%), Positives = 140/284 (49%), Gaps = 3/284 (1%)

Query: 356 FKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEAL 415
           F  D   YTT+V    R+ +     ++  +M + G  PNV TY  +I +  RA  +  A 
Sbjct: 246 FTPDVVLYTTLVHAWCRSGRLDEAERVFAEMQQAGVTPNVYTYTAVIDAMYRAGQVPRAQ 305

Query: 416 DVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII--N 473
           ++  QM   GC P+  T+  ++  H KAG  +  + ++ +M+  G  PD  TY+ ++  +
Sbjct: 306 ELLCQMIDSGCPPNTATFNAIMRAHVKAGRSEQVLQVHNQMRQLGCEPDIITYNFLMETH 365

Query: 474 CLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEP 533
           C     +L AA ++   M+ +GCIP+  T+N M+ L     N  +A KLY  MQ    +P
Sbjct: 366 CGKGQSNLDAAMKMLTRMIAKGCIPDCHTFNPMLKLVLVLGNVNAARKLYERMQELQCKP 425

Query: 534 DKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWY 593
           + VTY+++M +      +D    +  +M  +   P+   Y  L++ +   GN ++A    
Sbjct: 426 NVVTYNLLMRLFNLEKSMDMVLRIKRDMDAQGVEPNVNTYAALIEAFCGRGNWKRAHMTL 485

Query: 594 EAML-QAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGL 636
             M+ +  L+P  P  + +L+   + GQL     L++ M++ G 
Sbjct: 486 REMVEEKALKPTKPVYDMVLALLRKAGQLRRHEELVEMMVDRGF 529



 Score = 76.3 bits (186), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 57/200 (28%), Positives = 97/200 (48%), Gaps = 10/200 (5%)

Query: 460 GLSPDTFT--YSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIAL---QAKAR 514
            L PD+    Y+ +I+ L K  H   A  L  EM  +  +P  ++  +++AL     +A 
Sbjct: 138 SLPPDSLPALYAAMIDLLAKHHHFPLARHLLDEM-RERSVP--ISAQLILALIRRYVRAE 194

Query: 515 NYQSALKLYRDMQNAGF-EPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVY 573
               A  L+R M+  G   PD  T + ++  L       EA+A+F +  +  + PD  +Y
Sbjct: 195 MPSEASDLFRRMEEYGAGAPDPATLASLLGALSKKRLASEAQAMF-DSYKSVFTPDVVLY 253

Query: 574 GLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLN 633
             LV  W ++G + +A   +  M QAG+ PNV T  +++ A  R GQ+  A  LL  M++
Sbjct: 254 TTLVHAWCRSGRLDEAERVFAEMQQAGVTPNVYTYTAVIDAMYRAGQVPRAQELLCQMID 313

Query: 634 LGLKPSLQTYTLLLSCCTEA 653
            G  P+  T+  ++    +A
Sbjct: 314 SGCPPNTATFNAIMRAHVKA 333



 Score = 67.8 bits (164), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 42/140 (30%), Positives = 68/140 (48%), Gaps = 1/140 (0%)

Query: 359 DEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVF 418
           D HT+  M+ ++       A  KL ++M    C+PNVVTYN L+  +     ++  L + 
Sbjct: 391 DCHTFNPMLKLVLVLGNVNAARKLYERMQELQCKPNVVTYNLLMRLFNLEKSMDMVLRIK 450

Query: 419 KQMQVVGCEPDRVTYCTLIDIHAKAGFLDVA-MDMYKKMQAAGLSPDTFTYSVIINCLGK 477
           + M   G EP+  TY  LI+     G    A M + + ++   L P    Y +++  L K
Sbjct: 451 RDMDAQGVEPNVNTYAALIEAFCGRGNWKRAHMTLREMVEEKALKPTKPVYDMVLALLRK 510

Query: 478 AGHLQAAHQLFCEMVNQGCI 497
           AG L+   +L   MV++G I
Sbjct: 511 AGQLRRHEELVEMMVDRGFI 530


>gi|357122970|ref|XP_003563186.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
           mitochondrial-like [Brachypodium distachyon]
          Length = 675

 Score =  153 bits (386), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 97/341 (28%), Positives = 156/341 (45%), Gaps = 14/341 (4%)

Query: 330 ANQVLKQLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRD 389
           A QVL ++ D               G   DE TY+ +V    RA ++ +   LL +M  D
Sbjct: 325 AEQVLDEMSD--------------CGVAPDEATYSLLVDAYTRAGRWESARILLKEMEAD 370

Query: 390 GCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVA 449
           G +P+   ++R++  +       +A  V ++M   G +PDR  Y  +ID   K   L  A
Sbjct: 371 GVKPSSYVFSRILAGFRDRGDWQKAFAVLREMHASGVQPDRHFYNVMIDTFGKYNCLGHA 430

Query: 450 MDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIAL 509
           MD + +M+  G+ PD  T++ +I+   K G    A +LF EM    C P   TYNIMI L
Sbjct: 431 MDAFNRMREEGIEPDVVTWNTLIDAHRKGGRHDRAMELFEEMRESNCPPGTTTYNIMINL 490

Query: 510 QAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPD 569
             +   +     +  +M+  G  P+ +TY+ +++V G  G   EA      M+     P 
Sbjct: 491 LGEQERWVGVETMLSEMKEQGLVPNIITYTTLVDVYGRSGRFKEAIECIEVMKADGLKPS 550

Query: 570 EPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQ 629
             +Y  LV+ + + G    A    +AM   GL  +    NSL++AF    ++ +A+ +LQ
Sbjct: 551 PTMYHALVNAYAQRGLADHALNVVKAMRADGLEASTVVLNSLMNAFGEDRRVVEAFSVLQ 610

Query: 630 GMLNLGLKPSLQTYTLLLSCCTEARSPYDMGFCHELMAVSG 670
            M    L+P + TYT L+           +   +E M  SG
Sbjct: 611 FMKENDLRPDVITYTTLMKALIRIEQFDKVPVIYEEMITSG 651



 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 79/268 (29%), Positives = 136/268 (50%)

Query: 382 LLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHA 441
           +L +M   G QP+   YN +I ++G+ N L  A+D F +M+  G EPD VT+ TLID H 
Sbjct: 398 VLREMHASGVQPDRHFYNVMIDTFGKYNCLGHAMDAFNRMREEGIEPDVVTWNTLIDAHR 457

Query: 442 KAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLV 501
           K G  D AM+++++M+ +   P T TY+++IN LG+         +  EM  QG +PN++
Sbjct: 458 KGGRHDRAMELFEEMRESNCPPGTTTYNIMINLLGEQERWVGVETMLSEMKEQGLVPNII 517

Query: 502 TYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEM 561
           TY  ++ +  ++  ++ A++    M+  G +P    Y  ++      G  D A  V   M
Sbjct: 518 TYTTLVDVYGRSGRFKEAIECIEVMKADGLKPSPTMYHALVNAYAQRGLADHALNVVKAM 577

Query: 562 RRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQL 621
           R         V   L++ +G+   V +A+   + M +  LRP+V T  +L+ A +R+ Q 
Sbjct: 578 RADGLEASTVVLNSLMNAFGEDRRVVEAFSVLQFMKENDLRPDVITYTTLMKALIRIEQF 637

Query: 622 SDAYHLLQGMLNLGLKPSLQTYTLLLSC 649
                + + M+  G  P  +   +L S 
Sbjct: 638 DKVPVIYEEMITSGCAPDRKARAMLRSA 665



 Score =  132 bits (333), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 106/441 (24%), Positives = 184/441 (41%), Gaps = 54/441 (12%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDG-CQPNVVTYNRLIHSYGRANYLNE 413
           G     +  T ++  LG A +      L  +    G  +P    YN L+  Y +   L  
Sbjct: 265 GLTPRSNAVTALISALGGAGRVAEAEALFLEFFLAGEIKPRTRAYNALLKGYVKIGSLKN 324

Query: 414 ALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIIN 473
           A  V  +M   G  PD  TY  L+D + +AG  + A  + K+M+A G+ P ++ +S I+ 
Sbjct: 325 AEQVLDEMSDCGVAPDEATYSLLVDAYTRAGRWESARILLKEMEADGVKPSSYVFSRILA 384

Query: 474 CLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEP 533
                G  Q A  +  EM   G  P+   YN+MI    K      A+  +  M+  G EP
Sbjct: 385 GFRDRGDWQKAFAVLREMHASGVQPDRHFYNVMIDTFGKYNCLGHAMDAFNRMREEGIEP 444

Query: 534 DKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWY 593
           D VT++ +++     G  D A  +F EMR  N  P    Y ++++L G+    ++ W   
Sbjct: 445 DVVTWNTLIDAHRKGGRHDRAMELFEEMRESNCPPGTTTYNIMINLLGE----QERWVGV 500

Query: 594 EAML----QAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSC 649
           E ML    + GL PN+ T  +L+  + R G+  +A   ++ M   GLKPS   Y  L++ 
Sbjct: 501 ETMLSEMKEQGLVPNIITYTTLVDVYGRSGRFKEAIECIEVMKADGLKPSPTMYHALVNA 560

Query: 650 CTEARSPYDMGFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRESK 709
             +                                   + + DH  + ++ M ++  E+ 
Sbjct: 561 YAQ-----------------------------------RGLADHALNVVKAMRADGLEAS 585

Query: 710 RGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAVKEKGMSYWLINLHVMSDGTAVIA 769
             +++++++   +     EA SV +   + ++ PD +    +   LI +    D   VI 
Sbjct: 586 TVVLNSLMNAFGEDRRVVEAFSVLQFMKENDLRPDVITYTTLMKALIRIEQF-DKVPVI- 643

Query: 770 LSRTLAWFRKQMLISGVGPSR 790
                    ++M+ SG  P R
Sbjct: 644 --------YEEMITSGCAPDR 656



 Score = 99.0 bits (245), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 51/211 (24%), Positives = 100/211 (47%), Gaps = 1/211 (0%)

Query: 340 HTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYN 399
           H  A+  F  +R ++       TY  M+ +LG   ++  +  +L +M   G  PN++TY 
Sbjct: 462 HDRAMELFEEMR-ESNCPPGTTTYNIMINLLGEQERWVGVETMLSEMKEQGLVPNIITYT 520

Query: 400 RLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAA 459
            L+  YGR+    EA++  + M+  G +P    Y  L++ +A+ G  D A+++ K M+A 
Sbjct: 521 TLVDVYGRSGRFKEAIECIEVMKADGLKPSPTMYHALVNAYAQRGLADHALNVVKAMRAD 580

Query: 460 GLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSA 519
           GL   T   + ++N  G+   +  A  +   M      P+++TY  ++    +   +   
Sbjct: 581 GLEASTVVLNSLMNAFGEDRRVVEAFSVLQFMKENDLRPDVITYTTLMKALIRIEQFDKV 640

Query: 520 LKLYRDMQNAGFEPDKVTYSIVMEVLGHCGY 550
             +Y +M  +G  PD+   +++   L +  Y
Sbjct: 641 PVIYEEMITSGCAPDRKARAMLRSALRYMKY 671



 Score = 94.4 bits (233), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 79/377 (20%), Positives = 153/377 (40%), Gaps = 53/377 (14%)

Query: 237 VQPRSKAHSNRLNSNFKSNLQPSDAKVVECVSERFSKPSREMKIPAGLAPFSRHFASTGN 296
           ++PR++A+    N+  K  ++    K  E V +  S          G+AP     A+   
Sbjct: 302 IKPRTRAY----NALLKGYVKIGSLKNAEQVLDEMSD--------CGVAPDE---ATYSL 346

Query: 297 VVESVSRILRQWKWGPLAEEALGNTNYSMDAYQANQVLKQLQDHTVALGFFNWLRRQ--A 354
           +V++ +R  R W+   +  + +        +Y  +++L   +D       F  LR    +
Sbjct: 347 LVDAYTRAGR-WESARILLKEMEADGVKPSSYVFSRILAGFRDRGDWQKAFAVLREMHAS 405

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           G + D H Y  M+   G+    G      ++M  +G +P+VVT+N LI ++ +    + A
Sbjct: 406 GVQPDRHFYNVMIDTFGKYNCLGHAMDAFNRMREEGIEPDVVTWNTLIDAHRKGGRHDRA 465

Query: 415 LDVFKQMQVVGCEP-----------------------------------DRVTYCTLIDI 439
           +++F++M+   C P                                   + +TY TL+D+
Sbjct: 466 MELFEEMRESNCPPGTTTYNIMINLLGEQERWVGVETMLSEMKEQGLVPNIITYTTLVDV 525

Query: 440 HAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPN 499
           + ++G    A++  + M+A GL P    Y  ++N   + G    A  +   M   G   +
Sbjct: 526 YGRSGRFKEAIECIEVMKADGLKPSPTMYHALVNAYAQRGLADHALNVVKAMRADGLEAS 585

Query: 500 LVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFA 559
            V  N ++    + R    A  + + M+     PD +TY+ +M+ L      D+   ++ 
Sbjct: 586 TVVLNSLMNAFGEDRRVVEAFSVLQFMKENDLRPDVITYTTLMKALIRIEQFDKVPVIYE 645

Query: 560 EMRRKNWVPDEPVYGLL 576
           EM      PD     +L
Sbjct: 646 EMITSGCAPDRKARAML 662



 Score = 66.2 bits (160), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 58/265 (21%), Positives = 105/265 (39%), Gaps = 4/265 (1%)

Query: 486 QLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYR---DMQNAGFEPDKVTYSIVM 542
           +L   +   G +P+L +Y+ ++A     R+   A  L R   D++ +  EPD   +S ++
Sbjct: 183 RLLALIREHGFLPDLASYSHLLASLLNTRDPPDAAILERLLGDLRESRLEPDAPLFSDLI 242

Query: 543 EVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAG-L 601
                    D A  + A  +     P       L+   G AG V +A   +     AG +
Sbjct: 243 SAFARAALPDAALDLLASAQAIGLTPRSNAVTALISALGGAGRVAEAEALFLEFFLAGEI 302

Query: 602 RPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGF 661
           +P     N+LL  ++++G L +A  +L  M + G+ P   TY+LL+   T A        
Sbjct: 303 KPRTRAYNALLKGYVKIGSLKNAEQVLDEMSDCGVAPDEATYSLLVDAYTRAGRWESARI 362

Query: 662 CHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRESKRGLVDAVVDFLH 721
             + M   G     ++ S    G   +       + L  MH+   +  R   + ++D   
Sbjct: 363 LLKEMEADGVKPSSYVFSRILAGFRDRGDWQKAFAVLREMHASGVQPDRHFYNVMIDTFG 422

Query: 722 KSGLKEEAGSVWEVAAQKNVYPDAV 746
           K      A   +    ++ + PD V
Sbjct: 423 KYNCLGHAMDAFNRMREEGIEPDVV 447


>gi|302821481|ref|XP_002992403.1| hypothetical protein SELMODRAFT_42645 [Selaginella moellendorffii]
 gi|300139819|gb|EFJ06553.1| hypothetical protein SELMODRAFT_42645 [Selaginella moellendorffii]
          Length = 448

 Score =  153 bits (386), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 90/280 (32%), Positives = 150/280 (53%), Gaps = 4/280 (1%)

Query: 359 DEHTYTTMV-GILGRAR-QFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALD 416
           D  TY  ++ G   + R Q GA  KLL +MV+ GC+PN +TYN L+ S  ++    +A +
Sbjct: 171 DVFTYNILIDGYCKQERPQDGA--KLLQEMVKYGCEPNFITYNTLMDSLVKSGKYIDAFN 228

Query: 417 VFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLG 476
           + + M    C+P   T+  +ID+  K G LD+A ++++ M   G  PD +TY+++I+   
Sbjct: 229 LAQMMLRRDCKPSHFTFNLMIDMFCKVGQLDLAYELFQLMTDRGCLPDIYTYNIMISGAC 288

Query: 477 KAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKV 536
           +A  +  A QL   M   GC P++VTYN +++   KA     A ++Y  ++N G+  D V
Sbjct: 289 RANRIDDARQLLERMTEAGCPPDVVTYNSIVSGLCKASQVDEAYEVYEVLRNGGYFLDVV 348

Query: 537 TYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAM 596
           T S +++ L     LD+AE +  EM R    PD   Y +L+  + KA  + K+  ++  M
Sbjct: 349 TCSTLIDGLCKSRRLDDAEKLLREMERNGSAPDVVAYTILIHGFCKADQLDKSLAFFSEM 408

Query: 597 LQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGL 636
           L  G  P V T + ++    +  ++ D   LL+ ML  G+
Sbjct: 409 LDKGCVPTVITYSIVIDKLCKSARVRDGCMLLKTMLERGV 448



 Score =  152 bits (385), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 89/290 (30%), Positives = 149/290 (51%), Gaps = 1/290 (0%)

Query: 359 DEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVF 418
           D  TY+T++    +AR F    +LLD+M + G  P+   YN +I        ++ AL  +
Sbjct: 32  DSITYSTLINGFCKARDFQQAYRLLDEMEKRGIVPHNAVYNTIIKGLCDNGRVDSALVHY 91

Query: 419 KQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKA 478
           + MQ   C P  +TY  L+D   K+  +  A  + + M  AG +P+  TY+ +IN   K 
Sbjct: 92  RDMQR-HCAPSVITYTILVDALCKSARISDASLILEDMIEAGCAPNVVTYNTLINGFCKL 150

Query: 479 GHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTY 538
           G++  A  LF +M+   C P++ TYNI+I    K    Q   KL ++M   G EP+ +TY
Sbjct: 151 GNMDEAVVLFNQMLENSCSPDVFTYNILIDGYCKQERPQDGAKLLQEMVKYGCEPNFITY 210

Query: 539 SIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQ 598
           + +M+ L   G   +A  +   M R++  P    + L++D++ K G +  A+E ++ M  
Sbjct: 211 NTLMDSLVKSGKYIDAFNLAQMMLRRDCKPSHFTFNLMIDMFCKVGQLDLAYELFQLMTD 270

Query: 599 AGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
            G  P++ T N ++S   R  ++ DA  LL+ M   G  P + TY  ++S
Sbjct: 271 RGCLPDIYTYNIMISGACRANRIDDARQLLERMTEAGCPPDVVTYNSIVS 320



 Score =  149 bits (375), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 90/303 (29%), Positives = 149/303 (49%), Gaps = 1/303 (0%)

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
           +AG   +  TY T++    +         L +QM+ + C P+V TYN LI  Y +     
Sbjct: 130 EAGCAPNVVTYNTLINGFCKLGNMDEAVVLFNQMLENSCSPDVFTYNILIDGYCKQERPQ 189

Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
           +   + ++M   GCEP+ +TY TL+D   K+G    A ++ + M      P  FT++++I
Sbjct: 190 DGAKLLQEMVKYGCEPNFITYNTLMDSLVKSGKYIDAFNLAQMMLRRDCKPSHFTFNLMI 249

Query: 473 NCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFE 532
           +   K G L  A++LF  M ++GC+P++ TYNIMI+   +A     A +L   M  AG  
Sbjct: 250 DMFCKVGQLDLAYELFQLMTDRGCLPDIYTYNIMISGACRANRIDDARQLLERMTEAGCP 309

Query: 533 PDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEW 592
           PD VTY+ ++  L     +DEA  V+  +R   +  D      L+D   K+  +  A + 
Sbjct: 310 PDVVTYNSIVSGLCKASQVDEAYEVYEVLRNGGYFLDVVTCSTLIDGLCKSRRLDDAEKL 369

Query: 593 YEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS-CCT 651
              M + G  P+V     L+  F +  QL  +      ML+ G  P++ TY++++   C 
Sbjct: 370 LREMERNGSAPDVVAYTILIHGFCKADQLDKSLAFFSEMLDKGCVPTVITYSIVIDKLCK 429

Query: 652 EAR 654
            AR
Sbjct: 430 SAR 432



 Score =  133 bits (334), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 108/430 (25%), Positives = 189/430 (43%), Gaps = 18/430 (4%)

Query: 391 CQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAM 450
           C P+ +TY+ LI+ + +A    +A  +  +M+  G  P    Y T+I      G +D A+
Sbjct: 29  CSPDSITYSTLINGFCKARDFQQAYRLLDEMEKRGIVPHNAVYNTIIKGLCDNGRVDSAL 88

Query: 451 DMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQ 510
             Y+ MQ    +P   TY+++++ L K+  +  A  +  +M+  GC PN+VTYN +I   
Sbjct: 89  VHYRDMQRH-CAPSVITYTILVDALCKSARISDASLILEDMIEAGCAPNVVTYNTLINGF 147

Query: 511 AKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYL--DEAEAVFAEMRRKNWVP 568
            K  N   A+ L+  M      PD  TY+I+++  G+C      +   +  EM +    P
Sbjct: 148 CKLGNMDEAVVLFNQMLENSCSPDVFTYNILID--GYCKQERPQDGAKLLQEMVKYGCEP 205

Query: 569 DEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLL 628
           +   Y  L+D   K+G    A+   + ML+   +P+  T N ++  F +VGQL  AY L 
Sbjct: 206 NFITYNTLMDSLVKSGKYIDAFNLAQMMLRRDCKPSHFTFNLMIDMFCKVGQLDLAYELF 265

Query: 629 QGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGFCHELMAVSGHPAHMFLLSMPSPGPDGQ 688
           Q M + G  P + TY +++S    A    D     E M  +G P  +   +    G    
Sbjct: 266 QLMTDRGCLPDIYTYNIMISGACRANRIDDARQLLERMTEAGCPPDVVTYNSIVSGLCKA 325

Query: 689 NVRDHVGSFLEMMHSEDRESKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAVKE 748
           +  D      E++ +            ++D L KS   ++A  +     +    PD V  
Sbjct: 326 SQVDEAYEVYEVLRNGGYFLDVVTCSTLIDGLCKSRRLDDAEKLLREMERNGSAPDVVA- 384

Query: 749 KGMSYWLINLHVMSDGTAVIALSRTLAWFRKQMLISGVGPSRID---IVTGWGRRSRVTG 805
                + I +H          L ++LA+F  +ML  G  P+ I    ++    + +RV  
Sbjct: 385 -----YTILIHGFCKAD---QLDKSLAFF-SEMLDKGCVPTVITYSIVIDKLCKSARVRD 435

Query: 806 TSLVRQAVQE 815
             ++ + + E
Sbjct: 436 GCMLLKTMLE 445



 Score =  129 bits (323), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 95/349 (27%), Positives = 160/349 (45%), Gaps = 3/349 (0%)

Query: 399 NRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQA 458
           N L+ ++ R     EA D+FK      C PD +TY TLI+   KA     A  +  +M+ 
Sbjct: 2   NCLLSAFVRKKKAQEAYDLFKNHLCGLCSPDSITYSTLINGFCKARDFQQAYRLLDEMEK 61

Query: 459 AGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQS 518
            G+ P    Y+ II  L   G + +A   + +M  + C P+++TY I++    K+     
Sbjct: 62  RGIVPHNAVYNTIIKGLCDNGRVDSALVHYRDM-QRHCAPSVITYTILVDALCKSARISD 120

Query: 519 ALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVD 578
           A  +  DM  AG  P+ VTY+ ++      G +DEA  +F +M   +  PD   Y +L+D
Sbjct: 121 ASLILEDMIEAGCAPNVVTYNTLINGFCKLGNMDEAVVLFNQMLENSCSPDVFTYNILID 180

Query: 579 LWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKP 638
            + K    +   +  + M++ G  PN  T N+L+ + ++ G+  DA++L Q ML    KP
Sbjct: 181 GYCKQERPQDGAKLLQEMVKYGCEPNFITYNTLMDSLVKSGKYIDAFNLAQMMLRRDCKP 240

Query: 639 SLQTYTLLLSCCTEARSPYDMGF-CHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSF 697
           S  T+ L++    +     D+ +   +LM   G    ++  ++   G    N  D     
Sbjct: 241 SHFTFNLMIDMFCKV-GQLDLAYELFQLMTDRGCLPDIYTYNIMISGACRANRIDDARQL 299

Query: 698 LEMMHSEDRESKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAV 746
           LE M            +++V  L K+   +EA  V+EV      + D V
Sbjct: 300 LERMTEAGCPPDVVTYNSIVSGLCKASQVDEAYEVYEVLRNGGYFLDVV 348



 Score = 64.3 bits (155), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 36/110 (32%), Positives = 59/110 (53%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           R  G+  D  T +T++  L ++R+     KLL +M R+G  P+VV Y  LIH + +A+ L
Sbjct: 339 RNGGYFLDVVTCSTLIDGLCKSRRLDDAEKLLREMERNGSAPDVVAYTILIHGFCKADQL 398

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGL 461
           +++L  F +M   GC P  +TY  +ID   K+  +     + K M   G+
Sbjct: 399 DKSLAFFSEMLDKGCVPTVITYSIVIDKLCKSARVRDGCMLLKTMLERGV 448


>gi|242067349|ref|XP_002448951.1| hypothetical protein SORBIDRAFT_05g002310 [Sorghum bicolor]
 gi|241934794|gb|EES07939.1| hypothetical protein SORBIDRAFT_05g002310 [Sorghum bicolor]
          Length = 799

 Score =  153 bits (386), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 107/414 (25%), Positives = 186/414 (44%), Gaps = 11/414 (2%)

Query: 355 GFKHDEHTYTTMVGIL---GRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           G K D +TY +++  L   GR R+        D M+R G +P V TY  LIH Y     L
Sbjct: 299 GLKPDCYTYGSLLNYLCKNGRCRE---ARFFFDSMIRKGIKPKVSTYGILIHGYATKGAL 355

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
           +E       M   G  PD   +      +AK G +D AMD++ KM+  GLSP+   Y  +
Sbjct: 356 SEMHSFLDLMVENGLSPDHHIFNIFFSAYAKCGMIDKAMDIFNKMRQHGLSPNVVNYGAL 415

Query: 472 INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF 531
           I+ L K G +  A   F +M+N+G  PN+V +N ++        ++ A +L  +M + G 
Sbjct: 416 IDALCKLGRVDDAEVKFNQMINEGVTPNIVVFNSLVYGLCTVDKWERAEELVYEMLDQGI 475

Query: 532 EPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWE 591
            P+ V ++ ++  L + G + E   +   M      PD   Y  L+  +   G   +A +
Sbjct: 476 CPNAVFFNTLICNLCNVGRVMEGRRLIDLMEHVGVRPDAFSYTPLISGYCLTGRTDEAEK 535

Query: 592 WYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCT 651
            ++ M+  GL P   T N+LL  +    ++ DAY L + ML  G+ P + TY  +L    
Sbjct: 536 VFDGMVSIGLSPTEVTYNTLLHGYCSASRIDDAYCLFREMLRKGVTPGVVTYNTILHGLF 595

Query: 652 EARSPYDMGFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRESKRG 711
           + +   +    +  M  SG    ++  ++   G    N  D      + + S+  +    
Sbjct: 596 QTKRFSEAKELYLNMINSGTKCDIYTYNIILNGLCKSNCVDEAFKMFQSLCSKGLQLNII 655

Query: 712 LVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAVKEKGMSYWLINLHVMSDGT 765
               ++  L K G KE+A  ++       + P+ V     +Y L+  +++ +G+
Sbjct: 656 TFTIMIGALLKGGRKEDAMDLFAAIPANGLVPNVV-----TYRLVAENLIEEGS 704



 Score =  132 bits (333), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 95/344 (27%), Positives = 150/344 (43%), Gaps = 38/344 (11%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           G   D  TYTT++  L +A+ F     +  QM+ +G +PN  TYN LIH Y       E 
Sbjct: 229 GIPPDVVTYTTVIDGLCKAQLFDRAEGVFQQMIDNGFKPNNYTYNCLIHGYLSIGKWKEV 288

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
           + + ++M   G +PD  TY +L++   K G    A   +  M   G+ P   TY ++I+ 
Sbjct: 289 VQMLEEMSARGLKPDCYTYGSLLNYLCKNGRCREARFFFDSMIRKGIKPKVSTYGILIHG 348

Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPD 534
               G L   H     MV  G  P+   +NI  +  AK      A+ ++  M+  G  P+
Sbjct: 349 YATKGALSEMHSFLDLMVENGLSPDHHIFNIFFSAYAKCGMIDKAMDIFNKMRQHGLSPN 408

Query: 535 KVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPD-----EPVYGLL-VDLWGKA----- 583
            V Y  +++ L   G +D+AE  F +M  +   P+       VYGL  VD W +A     
Sbjct: 409 VVNYGALIDALCKLGRVDDAEVKFNQMINEGVTPNIVVFNSLVYGLCTVDKWERAEELVY 468

Query: 584 ------------------------GNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVG 619
                                   G V +     + M   G+RP+  +   L+S +   G
Sbjct: 469 EMLDQGICPNAVFFNTLICNLCNVGRVMEGRRLIDLMEHVGVRPDAFSYTPLISGYCLTG 528

Query: 620 QLSDAYHLLQGMLNLGLKPSLQTY-TLLLSCCTEARSPYDMGFC 662
           +  +A  +  GM+++GL P+  TY TLL   C+ +R   D  +C
Sbjct: 529 RTDEAEKVFDGMVSIGLSPTEVTYNTLLHGYCSASR--IDDAYC 570



 Score =  130 bits (328), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 93/338 (27%), Positives = 156/338 (46%), Gaps = 7/338 (2%)

Query: 321 TNYSMDAYQANQVLKQL-QDHTVALGFFNWLRR--QAGFKHDEHTYTTMVGILGRARQFG 377
           T + MD    NQ+LK L     V       L+R  + G   D  +YT ++  L   ++  
Sbjct: 119 TGWRMDHIAINQLLKGLCHGKRVGEAMDVLLQRMPELGCMPDTVSYTILLKGLCNEKRAE 178

Query: 378 AINKLLDQMVRDG---CQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYC 434
              +LL  M  D    C PNVV+Y+ +I+ +     +++  ++F +M   G  PD VTY 
Sbjct: 179 EALELLHMMADDHGRRCPPNVVSYSIVINGFFTEGQVDKPYNLFLEMIDRGIPPDVVTYT 238

Query: 435 TLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQ 494
           T+ID   KA   D A  ++++M   G  P+ +TY+ +I+     G  +   Q+  EM  +
Sbjct: 239 TVIDGLCKAQLFDRAEGVFQQMIDNGFKPNNYTYNCLIHGYLSIGKWKEVVQMLEEMSAR 298

Query: 495 GCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEA 554
           G  P+  TY  ++    K    + A   +  M   G +P   TY I++      G L E 
Sbjct: 299 GLKPDCYTYGSLLNYLCKNGRCREARFFFDSMIRKGIKPKVSTYGILIHGYATKGALSEM 358

Query: 555 EAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSA 614
            +    M      PD  ++ +    + K G + KA + +  M Q GL PNV    +L+ A
Sbjct: 359 HSFLDLMVENGLSPDHHIFNIFFSAYAKCGMIDKAMDIFNKMRQHGLSPNVVNYGALIDA 418

Query: 615 FLRVGQLSDAYHLLQGMLNLGLKPSLQTY-TLLLSCCT 651
             ++G++ DA      M+N G+ P++  + +L+   CT
Sbjct: 419 LCKLGRVDDAEVKFNQMINEGVTPNIVVFNSLVYGLCT 456



 Score =  115 bits (287), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 80/308 (25%), Positives = 137/308 (44%), Gaps = 42/308 (13%)

Query: 383 LDQMVR---DGCQPNVVTYNRLIHSYGRANYLN--------------------------- 412
            ++MVR   D   PN+ TY+ LI  + R  +L                            
Sbjct: 75  FNRMVRECSDKVAPNLCTYSILIGRFCRMGHLEHGFAAFGLILKTGWRMDHIAINQLLKG 134

Query: 413 --------EALDVFKQ-MQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKM---QAAG 460
                   EA+DV  Q M  +GC PD V+Y  L+         + A+++   M       
Sbjct: 135 LCHGKRVGEAMDVLLQRMPELGCMPDTVSYTILLKGLCNEKRAEEALELLHMMADDHGRR 194

Query: 461 LSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSAL 520
             P+  +YS++IN     G +   + LF EM+++G  P++VTY  +I    KA+ +  A 
Sbjct: 195 CPPNVVSYSIVINGFFTEGQVDKPYNLFLEMIDRGIPPDVVTYTTVIDGLCKAQLFDRAE 254

Query: 521 KLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLW 580
            +++ M + GF+P+  TY+ ++      G   E   +  EM  +   PD   YG L++  
Sbjct: 255 GVFQQMIDNGFKPNNYTYNCLIHGYLSIGKWKEVVQMLEEMSARGLKPDCYTYGSLLNYL 314

Query: 581 GKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSL 640
            K G  R+A  ++++M++ G++P V T   L+  +   G LS+ +  L  M+  GL P  
Sbjct: 315 CKNGRCREARFFFDSMIRKGIKPKVSTYGILIHGYATKGALSEMHSFLDLMVENGLSPDH 374

Query: 641 QTYTLLLS 648
             + +  S
Sbjct: 375 HIFNIFFS 382



 Score =  114 bits (286), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 78/304 (25%), Positives = 141/304 (46%), Gaps = 1/304 (0%)

Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLI 402
           A+  FN +R Q G   +   Y  ++  L +  +        +QM+ +G  PN+V +N L+
Sbjct: 393 AMDIFNKMR-QHGLSPNVVNYGALIDALCKLGRVDDAEVKFNQMINEGVTPNIVVFNSLV 451

Query: 403 HSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLS 462
           +     +    A ++  +M   G  P+ V + TLI      G +     +   M+  G+ 
Sbjct: 452 YGLCTVDKWERAEELVYEMLDQGICPNAVFFNTLICNLCNVGRVMEGRRLIDLMEHVGVR 511

Query: 463 PDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKL 522
           PD F+Y+ +I+     G    A ++F  MV+ G  P  VTYN ++     A     A  L
Sbjct: 512 PDAFSYTPLISGYCLTGRTDEAEKVFDGMVSIGLSPTEVTYNTLLHGYCSASRIDDAYCL 571

Query: 523 YRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGK 582
           +R+M   G  P  VTY+ ++  L       EA+ ++  M       D   Y ++++   K
Sbjct: 572 FREMLRKGVTPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKCDIYTYNIILNGLCK 631

Query: 583 AGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQT 642
           +  V +A++ ++++   GL+ N+ T   ++ A L+ G+  DA  L   +   GL P++ T
Sbjct: 632 SNCVDEAFKMFQSLCSKGLQLNIITFTIMIGALLKGGRKEDAMDLFAAIPANGLVPNVVT 691

Query: 643 YTLL 646
           Y L+
Sbjct: 692 YRLV 695



 Score =  114 bits (284), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 73/271 (26%), Positives = 132/271 (48%)

Query: 381 KLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIH 440
           +L+D M   G +P+  +Y  LI  Y      +EA  VF  M  +G  P  VTY TL+  +
Sbjct: 500 RLIDLMEHVGVRPDAFSYTPLISGYCLTGRTDEAEKVFDGMVSIGLSPTEVTYNTLLHGY 559

Query: 441 AKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNL 500
             A  +D A  ++++M   G++P   TY+ I++ L +      A +L+  M+N G   ++
Sbjct: 560 CSASRIDDAYCLFREMLRKGVTPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKCDI 619

Query: 501 VTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAE 560
            TYNI++    K+     A K+++ + + G + + +T++I++  L   G  ++A  +FA 
Sbjct: 620 YTYNIILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFTIMIGALLKGGRKEDAMDLFAA 679

Query: 561 MRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQ 620
           +     VP+   Y L+ +   + G++ +    + AM + G  PN    N+L+   L  G 
Sbjct: 680 IPANGLVPNVVTYRLVAENLIEEGSLEEFDSLFSAMEKNGTAPNSQMLNALVRRLLHRGD 739

Query: 621 LSDAYHLLQGMLNLGLKPSLQTYTLLLSCCT 651
           +S A   L  +          T +LL+S  T
Sbjct: 740 ISRAGAYLSKLDERNFSVEASTTSLLMSIFT 770



 Score =  110 bits (276), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 74/267 (27%), Positives = 125/267 (46%)

Query: 381 KLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIH 440
           +L+ +M+  G  PN V +N LI +      + E   +   M+ VG  PD  +Y  LI  +
Sbjct: 465 ELVYEMLDQGICPNAVFFNTLICNLCNVGRVMEGRRLIDLMEHVGVRPDAFSYTPLISGY 524

Query: 441 AKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNL 500
              G  D A  ++  M + GLSP   TY+ +++    A  +  A+ LF EM+ +G  P +
Sbjct: 525 CLTGRTDEAEKVFDGMVSIGLSPTEVTYNTLLHGYCSASRIDDAYCLFREMLRKGVTPGV 584

Query: 501 VTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAE 560
           VTYN ++    + + +  A +LY +M N+G + D  TY+I++  L     +DEA  +F  
Sbjct: 585 VTYNTILHGLFQTKRFSEAKELYLNMINSGTKCDIYTYNIILNGLCKSNCVDEAFKMFQS 644

Query: 561 MRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQ 620
           +  K    +   + +++    K G    A + + A+   GL PNV T   +    +  G 
Sbjct: 645 LCSKGLQLNIITFTIMIGALLKGGRKEDAMDLFAAIPANGLVPNVVTYRLVAENLIEEGS 704

Query: 621 LSDAYHLLQGMLNLGLKPSLQTYTLLL 647
           L +   L   M   G  P+ Q    L+
Sbjct: 705 LEEFDSLFSAMEKNGTAPNSQMLNALV 731



 Score = 72.0 bits (175), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 46/196 (23%), Positives = 91/196 (46%)

Query: 362 TYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQM 421
           TY T++  L + ++F    +L   M+  G + ++ TYN +++   ++N ++EA  +F+ +
Sbjct: 586 TYNTILHGLFQTKRFSEAKELYLNMINSGTKCDIYTYNIILNGLCKSNCVDEAFKMFQSL 645

Query: 422 QVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHL 481
              G + + +T+  +I    K G  + AMD++  + A GL P+  TY ++   L + G L
Sbjct: 646 CSKGLQLNIITFTIMIGALLKGGRKEDAMDLFAAIPANGLVPNVVTYRLVAENLIEEGSL 705

Query: 482 QAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIV 541
           +    LF  M   G  PN    N ++       +   A      +    F  +  T S++
Sbjct: 706 EEFDSLFSAMEKNGTAPNSQMLNALVRRLLHRGDISRAGAYLSKLDERNFSVEASTTSLL 765

Query: 542 MEVLGHCGYLDEAEAV 557
           M +     Y   A+++
Sbjct: 766 MSIFTSDEYQHHAKSL 781



 Score = 51.2 bits (121), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 55/261 (21%), Positives = 107/261 (40%), Gaps = 26/261 (9%)

Query: 498 PNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEA-EA 556
           PNL TY+I+I    +  + +     +  +   G+  D +  + +++ L H   + EA + 
Sbjct: 88  PNLCTYSILIGRFCRMGHLEHGFAAFGLILKTGWRMDHIAINQLLKGLCHGKRVGEAMDV 147

Query: 557 VFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLR---PNVPTCNSLLS 613
           +   M     +PD   Y +L+          +A E    M     R   PNV + + +++
Sbjct: 148 LLQRMPELGCMPDTVSYTILLKGLCNEKRAEEALELLHMMADDHGRRCPPNVVSYSIVIN 207

Query: 614 AFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGFCH-ELMAVSGHP 672
            F   GQ+   Y+L   M++ G+ P + TYT ++            G C  +L   +   
Sbjct: 208 GFFTEGQVDKPYNLFLEMIDRGIPPDVVTYTTVID-----------GLCKAQLFDRAEGV 256

Query: 673 AHMFLLSMPSPGPDGQNVRDH----VGSFLEMMHSEDRESKRGL------VDAVVDFLHK 722
               + +   P     N   H    +G + E++   +  S RGL        +++++L K
Sbjct: 257 FQQMIDNGFKPNNYTYNCLIHGYLSIGKWKEVVQMLEEMSARGLKPDCYTYGSLLNYLCK 316

Query: 723 SGLKEEAGSVWEVAAQKNVYP 743
           +G   EA   ++   +K + P
Sbjct: 317 NGRCREARFFFDSMIRKGIKP 337



 Score = 43.1 bits (100), Expect = 0.64,   Method: Compositional matrix adjust.
 Identities = 28/131 (21%), Positives = 61/131 (46%)

Query: 354 AGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNE 413
           +G K D +TY  ++  L ++       K+   +   G Q N++T+  +I +  +     +
Sbjct: 613 SGTKCDIYTYNIILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFTIMIGALLKGGRKED 672

Query: 414 ALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIIN 473
           A+D+F  +   G  P+ VTY  + +   + G L+    ++  M+  G +P++   + ++ 
Sbjct: 673 AMDLFAAIPANGLVPNVVTYRLVAENLIEEGSLEEFDSLFSAMEKNGTAPNSQMLNALVR 732

Query: 474 CLGKAGHLQAA 484
            L   G +  A
Sbjct: 733 RLLHRGDISRA 743


>gi|356554658|ref|XP_003545661.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960,
           mitochondrial-like [Glycine max]
          Length = 675

 Score =  153 bits (386), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 96/294 (32%), Positives = 150/294 (51%)

Query: 362 TYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQM 421
           TY T++  L +  +     KLLD MV     P++V+YN LI+ Y R   + EA  +F ++
Sbjct: 297 TYNTIMYGLCKWGRVSDARKLLDVMVNKNLMPDLVSYNTLIYGYTRLGNIGEAFLLFAEL 356

Query: 422 QVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHL 481
           +  G  P  VTY TLID   + G LDVAM +  +M   G  PD FT+++++    K G+L
Sbjct: 357 RFRGLVPSVVTYNTLIDGLCRMGDLDVAMRLKDEMIKHGPDPDVFTFTILVRGFCKLGNL 416

Query: 482 QAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIV 541
             A +LF EM+N+G  P+   Y   I  + K  +   A  +  +M   GF PD +TY++ 
Sbjct: 417 PMAKELFDEMLNRGLQPDRFAYITRIVGELKLGDPSKAFGMQEEMLARGFPPDLITYNVF 476

Query: 542 MEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGL 601
           ++ L   G L EA  +  +M     VPD   Y  ++     AG++RKA   +  ML  G+
Sbjct: 477 IDGLHKLGNLKEASELVKKMLYNGLVPDHVTYTSIIHAHLMAGHLRKARAVFLEMLSKGI 536

Query: 602 RPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARS 655
            P+V T   L+ ++   G+L  A      M   G+ P++ TY  L++   + R 
Sbjct: 537 FPSVVTYTVLIHSYAVRGRLKLAILHFFEMHEKGVHPNVITYNALINGLCKVRK 590



 Score =  143 bits (360), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 87/258 (33%), Positives = 135/258 (52%)

Query: 386 MVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGF 445
           MV  G +P VVTYN ++ S+ +   + EAL +  QMQ +GC P+ VTY  L++  + +G 
Sbjct: 181 MVECGIRPTVVTYNTMLDSFCKQGKVQEALQLLLQMQKMGCLPNDVTYNVLVNGLSHSGE 240

Query: 446 LDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNI 505
           L+ A ++ ++M   GL    +TY  +I    + G L  A +L  EM+++G +P LVTYN 
Sbjct: 241 LEQAKELIQEMLRLGLEVSAYTYDPLIRGYCEKGQLDEASRLGEEMLSRGAVPTLVTYNT 300

Query: 506 MIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKN 565
           ++    K      A KL   M N    PD V+Y+ ++      G + EA  +FAE+R + 
Sbjct: 301 IMYGLCKWGRVSDARKLLDVMVNKNLMPDLVSYNTLIYGYTRLGNIGEAFLLFAELRFRG 360

Query: 566 WVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAY 625
            VP    Y  L+D   + G++  A    + M++ G  P+V T   L+  F ++G L  A 
Sbjct: 361 LVPSVVTYNTLIDGLCRMGDLDVAMRLKDEMIKHGPDPDVFTFTILVRGFCKLGNLPMAK 420

Query: 626 HLLQGMLNLGLKPSLQTY 643
            L   MLN GL+P    Y
Sbjct: 421 ELFDEMLNRGLQPDRFAY 438



 Score =  137 bits (345), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 100/326 (30%), Positives = 164/326 (50%), Gaps = 5/326 (1%)

Query: 326 DAYQANQVLKQLQDHT----VALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINK 381
           D    N+VL+ L+D      VA   +N +  + G +    TY TM+    +  +     +
Sbjct: 153 DLKNCNRVLRLLRDRDSSIDVAREVYNVMV-ECGIRPTVVTYNTMLDSFCKQGKVQEALQ 211

Query: 382 LLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHA 441
           LL QM + GC PN VTYN L++    +  L +A ++ ++M  +G E    TY  LI  + 
Sbjct: 212 LLLQMQKMGCLPNDVTYNVLVNGLSHSGELEQAKELIQEMLRLGLEVSAYTYDPLIRGYC 271

Query: 442 KAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLV 501
           + G LD A  + ++M + G  P   TY+ I+  L K G +  A +L   MVN+  +P+LV
Sbjct: 272 EKGQLDEASRLGEEMLSRGAVPTLVTYNTIMYGLCKWGRVSDARKLLDVMVNKNLMPDLV 331

Query: 502 TYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEM 561
           +YN +I    +  N   A  L+ +++  G  P  VTY+ +++ L   G LD A  +  EM
Sbjct: 332 SYNTLIYGYTRLGNIGEAFLLFAELRFRGLVPSVVTYNTLIDGLCRMGDLDVAMRLKDEM 391

Query: 562 RRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQL 621
            +    PD   + +LV  + K GN+  A E ++ ML  GL+P+     + +   L++G  
Sbjct: 392 IKHGPDPDVFTFTILVRGFCKLGNLPMAKELFDEMLNRGLQPDRFAYITRIVGELKLGDP 451

Query: 622 SDAYHLLQGMLNLGLKPSLQTYTLLL 647
           S A+ + + ML  G  P L TY + +
Sbjct: 452 SKAFGMQEEMLARGFPPDLITYNVFI 477



 Score =  136 bits (342), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 91/290 (31%), Positives = 142/290 (48%)

Query: 359 DEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVF 418
           D  +Y T++    R    G    L  ++   G  P+VVTYN LI    R   L+ A+ + 
Sbjct: 329 DLVSYNTLIYGYTRLGNIGEAFLLFAELRFRGLVPSVVTYNTLIDGLCRMGDLDVAMRLK 388

Query: 419 KQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKA 478
            +M   G +PD  T+  L+    K G L +A +++ +M   GL PD F Y   I    K 
Sbjct: 389 DEMIKHGPDPDVFTFTILVRGFCKLGNLPMAKELFDEMLNRGLQPDRFAYITRIVGELKL 448

Query: 479 GHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTY 538
           G    A  +  EM+ +G  P+L+TYN+ I    K  N + A +L + M   G  PD VTY
Sbjct: 449 GDPSKAFGMQEEMLARGFPPDLITYNVFIDGLHKLGNLKEASELVKKMLYNGLVPDHVTY 508

Query: 539 SIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQ 598
           + ++      G+L +A AVF EM  K   P    Y +L+  +   G ++ A   +  M +
Sbjct: 509 TSIIHAHLMAGHLRKARAVFLEMLSKGIFPSVVTYTVLIHSYAVRGRLKLAILHFFEMHE 568

Query: 599 AGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
            G+ PNV T N+L++   +V ++  AY     M   G+ P+  TYT+L++
Sbjct: 569 KGVHPNVITYNALINGLCKVRKMDQAYKFFTEMQAKGISPNKYTYTILIN 618



 Score =  132 bits (333), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 95/314 (30%), Positives = 157/314 (50%), Gaps = 12/314 (3%)

Query: 342 VALGFFNWLRRQAGFKHDEHTYTTMVGILGR----ARQFGAINKLLDQMVRDGCQPNVVT 397
           VAL FF W  RQ GFK  E TY  ++ IL R       +  + K++   + +G   +V+ 
Sbjct: 63  VALRFFRWAERQTGFKRSELTYAVILDILARNGLMRSAYCVMEKVVSVKMENG-VVDVLI 121

Query: 398 YNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYC--TLIDIHAKAGFLDVAMDMYKK 455
            + L+  Y + + L + L VF +M   G  PD +  C   L  +  +   +DVA ++Y  
Sbjct: 122 LDLLLWIYAKKSMLEKCLLVFYKMVSKGMLPD-LKNCNRVLRLLRDRDSSIDVAREVYNV 180

Query: 456 MQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARN 515
           M   G+ P   TY+ +++   K G +Q A QL  +M   GC+PN VTYN+++   + +  
Sbjct: 181 MVECGIRPTVVTYNTMLDSFCKQGKVQEALQLLLQMQKMGCLPNDVTYNVLVNGLSHSGE 240

Query: 516 YQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHC--GYLDEAEAVFAEMRRKNWVPDEPVY 573
            + A +L ++M   G E    TY  ++   G+C  G LDEA  +  EM  +  VP    Y
Sbjct: 241 LEQAKELIQEMLRLGLEVSAYTYDPLIR--GYCEKGQLDEASRLGEEMLSRGAVPTLVTY 298

Query: 574 GLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLN 633
             ++    K G V  A +  + M+   L P++ + N+L+  + R+G + +A+ L   +  
Sbjct: 299 NTIMYGLCKWGRVSDARKLLDVMVNKNLMPDLVSYNTLIYGYTRLGNIGEAFLLFAELRF 358

Query: 634 LGLKPSLQTYTLLL 647
            GL PS+ TY  L+
Sbjct: 359 RGLVPSVVTYNTLI 372



 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 98/348 (28%), Positives = 165/348 (47%), Gaps = 9/348 (2%)

Query: 309 KWGPLAE-----EALGNTNYSMDAYQANQVL---KQLQDHTVALGFFNWLRRQAGFKHDE 360
           KWG +++     + + N N   D    N ++    +L +   A   F  LR + G     
Sbjct: 307 KWGRVSDARKLLDVMVNKNLMPDLVSYNTLIYGYTRLGNIGEAFLLFAELRFR-GLVPSV 365

Query: 361 HTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQ 420
            TY T++  L R        +L D+M++ G  P+V T+  L+  + +   L  A ++F +
Sbjct: 366 VTYNTLIDGLCRMGDLDVAMRLKDEMIKHGPDPDVFTFTILVRGFCKLGNLPMAKELFDE 425

Query: 421 MQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGH 480
           M   G +PDR  Y T I    K G    A  M ++M A G  PD  TY+V I+ L K G+
Sbjct: 426 MLNRGLQPDRFAYITRIVGELKLGDPSKAFGMQEEMLARGFPPDLITYNVFIDGLHKLGN 485

Query: 481 LQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSI 540
           L+ A +L  +M+  G +P+ VTY  +I     A + + A  ++ +M + G  P  VTY++
Sbjct: 486 LKEASELVKKMLYNGLVPDHVTYTSIIHAHLMAGHLRKARAVFLEMLSKGIFPSVVTYTV 545

Query: 541 VMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAG 600
           ++      G L  A   F EM  K   P+   Y  L++   K   + +A++++  M   G
Sbjct: 546 LIHSYAVRGRLKLAILHFFEMHEKGVHPNVITYNALINGLCKVRKMDQAYKFFTEMQAKG 605

Query: 601 LRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
           + PN  T   L++    +G   +A  L + ML+  ++P   T++ LL 
Sbjct: 606 ISPNKYTYTILINENCNLGHWQEALRLYKDMLDREIQPDSCTHSALLK 653



 Score =  112 bits (279), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 64/191 (33%), Positives = 103/191 (53%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           GF  D  TY   +  L +       ++L+ +M+ +G  P+ VTY  +IH++  A +L +A
Sbjct: 465 GFPPDLITYNVFIDGLHKLGNLKEASELVKKMLYNGLVPDHVTYTSIIHAHLMAGHLRKA 524

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
             VF +M   G  P  VTY  LI  +A  G L +A+  + +M   G+ P+  TY+ +IN 
Sbjct: 525 RAVFLEMLSKGIFPSVVTYTVLIHSYAVRGRLKLAILHFFEMHEKGVHPNVITYNALING 584

Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPD 534
           L K   +  A++ F EM  +G  PN  TY I+I       ++Q AL+LY+DM +   +PD
Sbjct: 585 LCKVRKMDQAYKFFTEMQAKGISPNKYTYTILINENCNLGHWQEALRLYKDMLDREIQPD 644

Query: 535 KVTYSIVMEVL 545
             T+S +++ L
Sbjct: 645 SCTHSALLKHL 655



 Score = 63.2 bits (152), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 38/117 (32%), Positives = 59/117 (50%), Gaps = 2/117 (1%)

Query: 362 TYTTMVGILG-RARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQ 420
           TYT ++     R R   AI     +M   G  PNV+TYN LI+   +   +++A   F +
Sbjct: 542 TYTVLIHSYAVRGRLKLAILHFF-EMHEKGVHPNVITYNALINGLCKVRKMDQAYKFFTE 600

Query: 421 MQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGK 477
           MQ  G  P++ TY  LI+ +   G    A+ +YK M    + PD+ T+S ++  L K
Sbjct: 601 MQAKGISPNKYTYTILINENCNLGHWQEALRLYKDMLDREIQPDSCTHSALLKHLNK 657



 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 55/213 (25%), Positives = 89/213 (41%), Gaps = 19/213 (8%)

Query: 551 LDEAEAVFAEMRRKNWVPD----EPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVP 606
           L++   VF +M  K  +PD      V  LL D   +  ++  A E Y  M++ G+RP V 
Sbjct: 135 LEKCLLVFYKMVSKGMLPDLKNCNRVLRLLRD---RDSSIDVAREVYNVMVECGIRPTVV 191

Query: 607 TCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGFCHELM 666
           T N++L +F + G++ +A  LL  M  +G  P+  TY +L++  + +          + M
Sbjct: 192 TYNTMLDSFCKQGKVQEALQLLLQMQKMGCLPNDVTYNVLVNGLSHSGELEQAKELIQEM 251

Query: 667 AVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRESKRGLVDAVVDF------L 720
              G     +       G   +   D      E M S      RG V  +V +      L
Sbjct: 252 LRLGLEVSAYTYDPLIRGYCEKGQLDEASRLGEEMLS------RGAVPTLVTYNTIMYGL 305

Query: 721 HKSGLKEEAGSVWEVAAQKNVYPDAVKEKGMSY 753
            K G   +A  + +V   KN+ PD V    + Y
Sbjct: 306 CKWGRVSDARKLLDVMVNKNLMPDLVSYNTLIY 338


>gi|357499981|ref|XP_003620279.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495294|gb|AES76497.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 585

 Score =  153 bits (386), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 91/322 (28%), Positives = 162/322 (50%), Gaps = 15/322 (4%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           GF  D+ +Y T++  L +  +  A   LL ++     Q N V YN +I+   +  ++N+A
Sbjct: 155 GFHLDQVSYGTLIHGLCKVGETRAALDLLQRVDGKLVQLNAVMYNTVIYGMCKDKHVNDA 214

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
            D++ +M   G  P+ VTY  LI      G L  A+D++ K+    + PD +T++++++ 
Sbjct: 215 FDLYSEMVSKGISPNVVTYSALISGFFVVGKLKDAIDLFNKIILENIKPDGYTFNILVDG 274

Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPD 534
             K   ++    +F  M+ QG IP++VTYN ++      +   +A  ++  M   G  PD
Sbjct: 275 FCKDRKMKEGKTVFAMMMKQGIIPDVVTYNSLMDGYCLVKEVNTAKSIFNTMAQGGVNPD 334

Query: 535 KVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYE 594
             +Y+I++        +D+A  +F EM  KN +P+   Y  L+D   K+G +  A +  +
Sbjct: 335 IRSYNILINGFCKIKKVDKAMNLFNEMHCKNIIPNVVTYNSLIDGLSKSGRISYALQLVD 394

Query: 595 AMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS--CCTE 652
            M   G+ PN+ T NS++ A  +  Q+  A  L+    + G++PS+ TYT+L+   C  E
Sbjct: 395 QMHDRGVPPNILTYNSIIDALFKTHQVDKAIALITKFKDQGIQPSMYTYTILIDGLCKVE 454

Query: 653 ARSPYDM----------GFCHE 664
               YD+          GFC +
Sbjct: 455 G---YDITVNTYNVMIHGFCKK 473



 Score =  115 bits (289), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 79/315 (25%), Positives = 154/315 (48%), Gaps = 17/315 (5%)

Query: 343 ALGFFNWLRRQ----AGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTY 398
           A+  FN L RQ      F+     +  ++G L +++ +  +  L  +M   G +PN+   
Sbjct: 70  AVSLFNRLLRQNPTPPAFE-----FNKILGSLVKSKHYHTVLSLSQKMEFRGIKPNLFNC 124

Query: 399 NRLIHSYGRANYL----NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYK 454
           N LI+ + +   +    ++A     ++  +G   D+V+Y TLI    K G    A+D+ +
Sbjct: 125 NILIYCFCQLGLIPCQIHQAFLFHDKLVALGFHLDQVSYGTLIHGLCKVGETRAALDLLQ 184

Query: 455 KMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKAR 514
           ++    +  +   Y+ +I  + K  H+  A  L+ EMV++G  PN+VTY+ +I+      
Sbjct: 185 RVDGKLVQLNAVMYNTVIYGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFVVG 244

Query: 515 NYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCG--YLDEAEAVFAEMRRKNWVPDEPV 572
             + A+ L+  +     +PD  T++I+++  G C    + E + VFA M ++  +PD   
Sbjct: 245 KLKDAIDLFNKIILENIKPDGYTFNILVD--GFCKDRKMKEGKTVFAMMMKQGIIPDVVT 302

Query: 573 YGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGML 632
           Y  L+D +     V  A   +  M Q G+ P++ + N L++ F ++ ++  A +L   M 
Sbjct: 303 YNSLMDGYCLVKEVNTAKSIFNTMAQGGVNPDIRSYNILINGFCKIKKVDKAMNLFNEMH 362

Query: 633 NLGLKPSLQTYTLLL 647
              + P++ TY  L+
Sbjct: 363 CKNIIPNVVTYNSLI 377



 Score =  114 bits (285), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 77/289 (26%), Positives = 136/289 (47%), Gaps = 24/289 (8%)

Query: 333 VLKQLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQ 392
           V+ +L+D   A+  FN +  +   K D +T+  +V    + R+      +   M++ G  
Sbjct: 242 VVGKLKD---AIDLFNKIILE-NIKPDGYTFNILVDGFCKDRKMKEGKTVFAMMMKQGII 297

Query: 393 PNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDM 452
           P+VVTYN L+  Y     +N A  +F  M   G  PD  +Y  LI+   K   +D AM++
Sbjct: 298 PDVVTYNSLMDGYCLVKEVNTAKSIFNTMAQGGVNPDIRSYNILINGFCKIKKVDKAMNL 357

Query: 453 YKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAK 512
           + +M    + P+  TY+ +I+ L K+G +  A QL  +M ++G  PN++TYN +I    K
Sbjct: 358 FNEMHCKNIIPNVVTYNSLIDGLSKSGRISYALQLVDQMHDRGVPPNILTYNSIIDALFK 417

Query: 513 ARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVL------------------GHC--GYLD 552
                 A+ L    ++ G +P   TY+I+++ L                  G C  G  D
Sbjct: 418 THQVDKAIALITKFKDQGIQPSMYTYTILIDGLCKVEGYDITVNTYNVMIHGFCKKGLFD 477

Query: 553 EAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGL 601
           EA ++ ++M+  + +P+   Y + +          KA + +  M+  GL
Sbjct: 478 EALSLLSKMKDSSCIPNAVTYEITIRSLLDNNENDKAEKLFREMITRGL 526



 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 95/443 (21%), Positives = 183/443 (41%), Gaps = 49/443 (11%)

Query: 382 LLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHA 441
           L ++++R    P    +N+++ S  ++ + +  L + ++M+  G +P+      LI    
Sbjct: 73  LFNRLLRQNPTPPAFEFNKILGSLVKSKHYHTVLSLSQKMEFRGIKPNLFNCNILIYCFC 132

Query: 442 KAGFLDV----AMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCI 497
           + G +      A   + K+ A G   D  +Y  +I+ L K G  +AA  L   +  +   
Sbjct: 133 QLGLIPCQIHQAFLFHDKLVALGFHLDQVSYGTLIHGLCKVGETRAALDLLQRVDGKLVQ 192

Query: 498 PNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAV 557
            N V YN +I    K ++   A  LY +M + G  P+ VTYS ++      G L +A  +
Sbjct: 193 LNAVMYNTVIYGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFVVGKLKDAIDL 252

Query: 558 FAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLR 617
           F ++  +N  PD   + +LVD + K   +++    +  M++ G+ P+V T NSL+  +  
Sbjct: 253 FNKIILENIKPDGYTFNILVDGFCKDRKMKEGKTVFAMMMKQGIIPDVVTYNSLMDGYCL 312

Query: 618 VGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGFCHELMAVSGHPAHMFL 677
           V +++ A  +   M   G+ P +++Y +L++           GFC ++  V         
Sbjct: 313 VKEVNTAKSIFNTMAQGGVNPDIRSYNILIN-----------GFC-KIKKV--------- 351

Query: 678 LSMPSPGPDGQNVRDHVGSFLEMMHSEDRESKRGLVDAVVDFLHKSGLKEEAGSVWEVAA 737
                         D   +    MH ++        ++++D L KSG    A  + +   
Sbjct: 352 --------------DKAMNLFNEMHCKNIIPNVVTYNSLIDGLSKSGRISYALQLVDQMH 397

Query: 738 QKNVYPDAVKEKGMSYWLINLHVMSDGTAVIALSRTLAWFRKQMLISGVGPSRIDIVTGW 797
            + V P+ +    +   L   H +    A+I        F+ Q    G+ PS        
Sbjct: 398 DRGVPPNILTYNSIIDALFKTHQVDKAIALI------TKFKDQ----GIQPSMYTYTILI 447

Query: 798 GRRSRVTGTSLVRQAVQELLHMF 820
               +V G  +       ++H F
Sbjct: 448 DGLCKVEGYDITVNTYNVMIHGF 470



 Score =  103 bits (258), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 82/320 (25%), Positives = 136/320 (42%), Gaps = 50/320 (15%)

Query: 363 YTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALD------ 416
           Y T++  + + +       L  +MV  G  PNVVTY+ LI  +     L +A+D      
Sbjct: 198 YNTVIYGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFVVGKLKDAIDLFNKII 257

Query: 417 -----------------------------VFKQMQVVGCEPDRVTYCTLIDIHAKAGFLD 447
                                        VF  M   G  PD VTY +L+D +     ++
Sbjct: 258 LENIKPDGYTFNILVDGFCKDRKMKEGKTVFAMMMKQGIIPDVVTYNSLMDGYCLVKEVN 317

Query: 448 VAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMI 507
            A  ++  M   G++PD  +Y+++IN   K   +  A  LF EM  +  IPN+VTYN +I
Sbjct: 318 TAKSIFNTMAQGGVNPDIRSYNILINGFCKIKKVDKAMNLFNEMHCKNIIPNVVTYNSLI 377

Query: 508 ALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWV 567
              +K+     AL+L   M + G  P+ +TY+ +++ L     +D+A A+  + + +   
Sbjct: 378 DGLSKSGRISYALQLVDQMHDRGVPPNILTYNSIIDALFKTHQVDKAIALITKFKDQGIQ 437

Query: 568 PDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHL 627
           P    Y +L+D   K        E Y+          V T N ++  F + G   +A  L
Sbjct: 438 PSMYTYTILIDGLCKV-------EGYDI--------TVNTYNVMIHGFCKKGLFDEALSL 482

Query: 628 LQGMLNLGLKPSLQTYTLLL 647
           L  M +    P+  TY + +
Sbjct: 483 LSKMKDSSCIPNAVTYEITI 502


>gi|255556314|ref|XP_002519191.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223541506|gb|EEF43055.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 719

 Score =  153 bits (386), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 85/272 (31%), Positives = 142/272 (52%)

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
           + G K    TY  ++  L  A +    N   +QMV+DG   NV +YN +I  + + + ++
Sbjct: 420 EQGMKFGFSTYLALIKALYMAGKVTEGNHYFNQMVKDGLLCNVCSYNMVIDCFCKTSMMD 479

Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
           +A + FK+MQ  G  P+ VT+ TLID + K G +  + D+   +   G  PD FT+S II
Sbjct: 480 KATNTFKEMQYKGIPPNLVTFNTLIDGYCKGGEICKSRDLLVMLLEHGFKPDIFTFSSII 539

Query: 473 NCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFE 532
           + L +A  ++ A   F EMV  G  PN VTYNI+I       +   ++KL R MQ  G  
Sbjct: 540 DGLCRAKQIEDALGCFSEMVMWGLSPNAVTYNILIHSLCIIGDVPRSMKLLRKMQTDGIN 599

Query: 533 PDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEW 592
           PD  +++ +++     G +++A+ +F+ M     +PD   Y   + ++ ++G   +A E 
Sbjct: 600 PDVFSFNALIQSFCRMGKVEDAKKLFSSMLSLGLIPDNYTYVAFIKVFCQSGRFNEAKEL 659

Query: 593 YEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDA 624
           + +M   G  P+  TCN +L A ++  Q   A
Sbjct: 660 FLSMEANGCMPDSFTCNIILDALVKQDQFEAA 691



 Score =  115 bits (288), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 77/275 (28%), Positives = 132/275 (48%), Gaps = 3/275 (1%)

Query: 373 ARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVT 432
           AR+ GA   LL +  + G +P+  T+N  ++   +   LNE  ++  +    G +    T
Sbjct: 373 AREAGA---LLKKFGKIGHKPDSATFNIAMNCLIKGFDLNEVCNILDRFVEQGMKFGFST 429

Query: 433 YCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMV 492
           Y  LI     AG +      + +M   GL  +  +Y+++I+C  K   +  A   F EM 
Sbjct: 430 YLALIKALYMAGKVTEGNHYFNQMVKDGLLCNVCSYNMVIDCFCKTSMMDKATNTFKEMQ 489

Query: 493 NQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLD 552
            +G  PNLVT+N +I    K      +  L   +   GF+PD  T+S +++ L     ++
Sbjct: 490 YKGIPPNLVTFNTLIDGYCKGGEICKSRDLLVMLLEHGFKPDIFTFSSIIDGLCRAKQIE 549

Query: 553 EAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLL 612
           +A   F+EM      P+   Y +L+      G+V ++ +    M   G+ P+V + N+L+
Sbjct: 550 DALGCFSEMVMWGLSPNAVTYNILIHSLCIIGDVPRSMKLLRKMQTDGINPDVFSFNALI 609

Query: 613 SAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
            +F R+G++ DA  L   ML+LGL P   TY   +
Sbjct: 610 QSFCRMGKVEDAKKLFSSMLSLGLIPDNYTYVAFI 644



 Score =  112 bits (281), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 73/295 (24%), Positives = 135/295 (45%)

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
           + G K D  T+   +  L +      +  +LD+ V  G +    TY  LI +   A  + 
Sbjct: 385 KIGHKPDSATFNIAMNCLIKGFDLNEVCNILDRFVEQGMKFGFSTYLALIKALYMAGKVT 444

Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
           E    F QM   G   +  +Y  +ID   K   +D A + +K+MQ  G+ P+  T++ +I
Sbjct: 445 EGNHYFNQMVKDGLLCNVCSYNMVIDCFCKTSMMDKATNTFKEMQYKGIPPNLVTFNTLI 504

Query: 473 NCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFE 532
           +   K G +  +  L   ++  G  P++ T++ +I    +A+  + AL  + +M   G  
Sbjct: 505 DGYCKGGEICKSRDLLVMLLEHGFKPDIFTFSSIIDGLCRAKQIEDALGCFSEMVMWGLS 564

Query: 533 PDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEW 592
           P+ VTY+I++  L   G +  +  +  +M+     PD   +  L+  + + G V  A + 
Sbjct: 565 PNAVTYNILIHSLCIIGDVPRSMKLLRKMQTDGINPDVFSFNALIQSFCRMGKVEDAKKL 624

Query: 593 YEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
           + +ML  GL P+  T  + +  F + G+ ++A  L   M   G  P   T  ++L
Sbjct: 625 FSSMLSLGLIPDNYTYVAFIKVFCQSGRFNEAKELFLSMEANGCMPDSFTCNIIL 679



 Score =  101 bits (252), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 99/478 (20%), Positives = 182/478 (38%), Gaps = 112/478 (23%)

Query: 302 SRILRQWKWGPLAEEALGNTNYSMDAYQANQVLKQLQDHTVALGFFNWLR---------- 351
           SRIL +  W  L          +++++    VL+  ++    L F+ W+           
Sbjct: 88  SRILSRHDWFLLLNHEFKAKRITLNSHSVASVLQNQENPLYPLKFYIWVSNMDPLFAKDQ 147

Query: 352 --------------------------RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQ 385
                                     + +G++ +E     ++G  GR       +++  Q
Sbjct: 148 SVKGVLANCLYRKGPVVLSVELLKDIKASGYRINEELLCILIGSWGRLGLAKYCDEIFGQ 207

Query: 386 MVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGF 445
           +   G  P+   YN +I +  ++N L+ A   F+QM    C+PDR TY  LI    ++G 
Sbjct: 208 ISFLGISPSTRLYNAVIDALVKSNSLDLAYLKFQQMSADNCKPDRFTYNILIHGVCRSGV 267

Query: 446 LDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQL------------------ 487
           +D A+ + K+M+  G SP+ FTY+++I+    A  +  A ++                  
Sbjct: 268 VDEALRLVKQMEGLGYSPNVFTYTILIDGFFNAKKVDEAFRVLETMKARKVSPSEATIRS 327

Query: 488 FCEMVNQGCIPN------------------LVTYNIMIALQAK--ARNYQSALKLYRDMQ 527
           F   V +   PN                  L    ++  L +K  AR   + LK +  + 
Sbjct: 328 FIHGVFRCVAPNKAFELAIEFIEREPVLQRLACDTLLCCLSSKNMAREAGALLKKFGKI- 386

Query: 528 NAGFEPDKVTYSIVMEVLGH-------CGYLD---------------------------- 552
             G +PD  T++I M  L         C  LD                            
Sbjct: 387 --GHKPDSATFNIAMNCLIKGFDLNEVCNILDRFVEQGMKFGFSTYLALIKALYMAGKVT 444

Query: 553 EAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLL 612
           E    F +M +   + +   Y +++D + K   + KA   ++ M   G+ PN+ T N+L+
Sbjct: 445 EGNHYFNQMVKDGLLCNVCSYNMVIDCFCKTSMMDKATNTFKEMQYKGIPPNLVTFNTLI 504

Query: 613 SAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGFCHELMAVSG 670
             + + G++  +  LL  +L  G KP + T++ ++     A+   D   C   M + G
Sbjct: 505 DGYCKGGEICKSRDLLVMLLEHGFKPDIFTFSSIIDGLCRAKQIEDALGCFSEMVMWG 562



 Score = 85.9 bits (211), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 71/332 (21%), Positives = 138/332 (41%), Gaps = 43/332 (12%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           G+  +  TYT ++     A++     ++L+ M      P+  T    IH   R    N+A
Sbjct: 282 GYSPNVFTYTILIDGFFNAKKVDEAFRVLETMKARKVSPSEATIRSFIHGVFRCVAPNKA 341

Query: 415 LDVFKQMQVVGCEP--DRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
            ++   ++ +  EP   R+   TL+   +       A  + KK    G  PD+ T+++ +
Sbjct: 342 FEL--AIEFIEREPVLQRLACDTLLCCLSSKNMAREAGALLKKFGKIGHKPDSATFNIAM 399

Query: 473 NCLGK-----------------------------------AGHLQAAHQLFCEMVNQGCI 497
           NCL K                                   AG +   +  F +MV  G +
Sbjct: 400 NCLIKGFDLNEVCNILDRFVEQGMKFGFSTYLALIKALYMAGKVTEGNHYFNQMVKDGLL 459

Query: 498 PNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHC--GYLDEAE 555
            N+ +YN++I    K      A   +++MQ  G  P+ VT++ +++  G+C  G + ++ 
Sbjct: 460 CNVCSYNMVIDCFCKTSMMDKATNTFKEMQYKGIPPNLVTFNTLID--GYCKGGEICKSR 517

Query: 556 AVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAF 615
            +   +    + PD   +  ++D   +A  +  A   +  M+  GL PN  T N L+ + 
Sbjct: 518 DLLVMLLEHGFKPDIFTFSSIIDGLCRAKQIEDALGCFSEMVMWGLSPNAVTYNILIHSL 577

Query: 616 LRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
             +G +  +  LL+ M   G+ P + ++  L+
Sbjct: 578 CIIGDVPRSMKLLRKMQTDGINPDVFSFNALI 609


>gi|357448559|ref|XP_003594555.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355483603|gb|AES64806.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 639

 Score =  153 bits (386), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 72/183 (39%), Positives = 113/183 (61%)

Query: 359 DEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVF 418
           D   Y T+   LGR +Q   I+ L ++M +DG  P++ TYN LI SYGRA  ++ A+ +F
Sbjct: 429 DTIMYNTVFTALGRLKQVSHIHDLYEKMKQDGPPPDIFTYNILISSYGRAGRVDSAVKIF 488

Query: 419 KQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKA 478
           ++++   C+PD ++Y +LI+   K G +D A   +K+MQ  GL+PD  TYS +I C GK 
Sbjct: 489 EELENSNCQPDVISYNSLINCLGKNGDVDEAHMRFKEMQEKGLNPDVVTYSTLIECFGKT 548

Query: 479 GHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTY 538
             ++ A  LF EM+ +GC PNLVTYNI++    ++     A+ LY  ++  G  PD +TY
Sbjct: 549 DKVEMACSLFDEMIAEGCSPNLVTYNILLDCLERSGRTAEAVDLYAKLKQQGLTPDSITY 608

Query: 539 SIV 541
           +++
Sbjct: 609 AVL 611



 Score =  145 bits (365), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 89/326 (27%), Positives = 153/326 (46%), Gaps = 32/326 (9%)

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTY-------------- 398
           + GF  +   Y TM+  L + R       L  +MV +GCQPN  TY              
Sbjct: 286 EKGFTLNLIAYNTMIEALAKGRMADKAVLLFSKMVENGCQPNEFTYSVLLNVLVAEGQLN 345

Query: 399 -------------NRLIHSY-----GRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIH 440
                        N+ I++Y      +  + +EA  +F  M  V  + D+  Y ++++  
Sbjct: 346 KLDNIVEMSKKYMNKQIYAYFVRTLSKLGHSSEAHRLFCNMWNVHDKGDKDAYMSMLESL 405

Query: 441 AKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNL 500
             +G +  A+D+  +     ++ DT  Y+ +   LG+   +   H L+ +M   G  P++
Sbjct: 406 CSSGKIAEAIDLLNRFHEKCITTDTIMYNTVFTALGRLKQVSHIHDLYEKMKQDGPPPDI 465

Query: 501 VTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAE 560
            TYNI+I+   +A    SA+K++ +++N+  +PD ++Y+ ++  LG  G +DEA   F E
Sbjct: 466 FTYNILISSYGRAGRVDSAVKIFEELENSNCQPDVISYNSLINCLGKNGDVDEAHMRFKE 525

Query: 561 MRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQ 620
           M+ K   PD   Y  L++ +GK   V  A   ++ M+  G  PN+ T N LL    R G+
Sbjct: 526 MQEKGLNPDVVTYSTLIECFGKTDKVEMACSLFDEMIAEGCSPNLVTYNILLDCLERSGR 585

Query: 621 LSDAYHLLQGMLNLGLKPSLQTYTLL 646
            ++A  L   +   GL P   TY +L
Sbjct: 586 TAEAVDLYAKLKQQGLTPDSITYAVL 611



 Score =  140 bits (352), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 100/382 (26%), Positives = 162/382 (42%), Gaps = 70/382 (18%)

Query: 336 QLQDHTVALG-FFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPN 394
           +L+D   A G + + LR   G+  D   +  ++  L + ++     K+ + M R  C+P+
Sbjct: 200 RLRDCDKAFGVYLDMLR--CGYSLDIFAFNMLLDALAKDQKVDKAYKVFEDMKRRHCEPD 257

Query: 395 VVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYK 454
             TY  +I   G+A   +E+L +F+ M   G   + + Y T+I+  AK    D A+ ++ 
Sbjct: 258 TFTYTIMIRMTGKAGKTDESLALFQAMLEKGFTLNLIAYNTMIEALAKGRMADKAVLLFS 317

Query: 455 KMQAAGLSPDTFTYSVIINC--------------------------------LGKAGHLQ 482
           KM   G  P+ FTYSV++N                                 L K GH  
Sbjct: 318 KMVENGCQPNEFTYSVLLNVLVAEGQLNKLDNIVEMSKKYMNKQIYAYFVRTLSKLGHSS 377

Query: 483 AAHQLFCEMVN----------------------------------QGCI-PNLVTYNIMI 507
            AH+LFC M N                                  + CI  + + YN + 
Sbjct: 378 EAHRLFCNMWNVHDKGDKDAYMSMLESLCSSGKIAEAIDLLNRFHEKCITTDTIMYNTVF 437

Query: 508 ALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWV 567
               + +       LY  M+  G  PD  TY+I++   G  G +D A  +F E+   N  
Sbjct: 438 TALGRLKQVSHIHDLYEKMKQDGPPPDIFTYNILISSYGRAGRVDSAVKIFEELENSNCQ 497

Query: 568 PDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHL 627
           PD   Y  L++  GK G+V +A   ++ M + GL P+V T ++L+  F +  ++  A  L
Sbjct: 498 PDVISYNSLINCLGKNGDVDEAHMRFKEMQEKGLNPDVVTYSTLIECFGKTDKVEMACSL 557

Query: 628 LQGMLNLGLKPSLQTYTLLLSC 649
              M+  G  P+L TY +LL C
Sbjct: 558 FDEMIAEGCSPNLVTYNILLDC 579



 Score =  116 bits (290), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 108/452 (23%), Positives = 194/452 (42%), Gaps = 42/452 (9%)

Query: 329 QANQVLKQLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRAR---QFGAINKLLDQ 385
           +A+ +LK L++ T+A  FF++       K+D   Y  +   L R+    +F     LLD 
Sbjct: 93  EASLILKSLKNPTLAFKFFHFC---PSLKNDPFIYNRLFLTLSRSSSQLRFEQTESLLDD 149

Query: 386 MVRDGCQPNVVTYNRLIHSYG-----------------------------RANYLNEALD 416
           M + G + ++ T N LI  +G                             R    ++A  
Sbjct: 150 MEKRGVKGSISTVNILIGFFGDLDRCVGLVKKWGLRFNAYSYKCLLQGYLRLRDCDKAFG 209

Query: 417 VFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLG 476
           V+  M   G   D   +  L+D  AK   +D A  +++ M+     PDTFTY+++I   G
Sbjct: 210 VYLDMLRCGYSLDIFAFNMLLDALAKDQKVDKAYKVFEDMKRRHCEPDTFTYTIMIRMTG 269

Query: 477 KAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKV 536
           KAG    +  LF  M+ +G   NL+ YN MI   AK R    A+ L+  M   G +P++ 
Sbjct: 270 KAGKTDESLALFQAMLEKGFTLNLIAYNTMIEALAKGRMADKAVLLFSKMVENGCQPNEF 329

Query: 537 TYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAM 596
           TYS+++ VL   G L++ + +  EM +K    ++ +Y   V    K G+  +A   +  M
Sbjct: 330 TYSVLLNVLVAEGQLNKLDNI-VEMSKKYM--NKQIYAYFVRTLSKLGHSSEAHRLFCNM 386

Query: 597 LQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSP 656
                + +     S+L +    G++++A  LL       +      Y  + +     +  
Sbjct: 387 WNVHDKGDKDAYMSMLESLCSSGKIAEAIDLLNRFHEKCITTDTIMYNTVFTALGRLKQV 446

Query: 657 YDMGFCHELMAVSGHPAHMFL--LSMPSPGPDGQNVRDHVGSFLEMMHSEDRESKRGLVD 714
             +   +E M   G P  +F   + + S G  G+   D      E + + + +      +
Sbjct: 447 SHIHDLYEKMKQDGPPPDIFTYNILISSYGRAGR--VDSAVKIFEELENSNCQPDVISYN 504

Query: 715 AVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAV 746
           ++++ L K+G  +EA   ++   +K + PD V
Sbjct: 505 SLINCLGKNGDVDEAHMRFKEMQEKGLNPDVV 536



 Score =  110 bits (274), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 54/160 (33%), Positives = 94/160 (58%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           +Q G   D  TY  ++   GRA +  +  K+ +++    CQP+V++YN LI+  G+   +
Sbjct: 457 KQDGPPPDIFTYNILISSYGRAGRVDSAVKIFEELENSNCQPDVISYNSLINCLGKNGDV 516

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
           +EA   FK+MQ  G  PD VTY TLI+   K   +++A  ++ +M A G SP+  TY+++
Sbjct: 517 DEAHMRFKEMQEKGLNPDVVTYSTLIECFGKTDKVEMACSLFDEMIAEGCSPNLVTYNIL 576

Query: 472 INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQA 511
           ++CL ++G    A  L+ ++  QG  P+ +TY ++  LQ+
Sbjct: 577 LDCLERSGRTAEAVDLYAKLKQQGLTPDSITYAVLERLQS 616


>gi|225439731|ref|XP_002272943.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
           chloroplastic [Vitis vinifera]
          Length = 772

 Score =  153 bits (386), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 94/313 (30%), Positives = 162/313 (51%), Gaps = 2/313 (0%)

Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLI 402
            L F + +  + GF+ D  T+ ++V  L R        ++LD M+++G  P++ TYN LI
Sbjct: 300 VLSFIDEMSNE-GFRPDRFTFNSLVNGLCRIGHVKHALEILDVMLQEGFDPDIFTYNSLI 358

Query: 403 HSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLS 462
               +   + EA+++  QM +    P+ VTY TLI    K   ++ A ++ + + + G+ 
Sbjct: 359 FGLCKLGEVEEAVEILNQMILRDFSPNTVTYNTLISTLCKENQVEEATELARVLTSKGIL 418

Query: 463 PDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKL 522
           PD  T++ +I  L    + + A +LF EM  +GC P+  TYN++I         + AL L
Sbjct: 419 PDVCTFNSLIQGLCLTNNHRLAMELFEEMKTKGCHPDEFTYNMLIDSLCSRGRLEEALSL 478

Query: 523 YRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGK 582
            ++M+++G   + VTY+ +++       ++EAE +F EM  +    +   Y  L+D   K
Sbjct: 479 LKEMESSGCSRNVVTYNTLIDGFCKNKRIEEAEEIFDEMELQGISRNVVTYNTLIDGLCK 538

Query: 583 AGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQT 642
              V +A +  + ML  GL+P+  T NSLL+ F R G +  A  ++Q M + G +P   T
Sbjct: 539 NRRVEEAAQLMDQMLMEGLKPDKFTYNSLLTYFCRAGDIKKAADIVQTMTSNGCEPDSVT 598

Query: 643 Y-TLLLSCCTEAR 654
           Y TL+L      R
Sbjct: 599 YGTLILGLSKAGR 611



 Score =  142 bits (359), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 87/292 (29%), Positives = 138/292 (47%)

Query: 356 FKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEAL 415
           F  +  TY T++  L +  Q     +L   +   G  P+V T+N LI      N    A+
Sbjct: 382 FSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTNNHRLAM 441

Query: 416 DVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCL 475
           ++F++M+  GC PD  TY  LID     G L+ A+ + K+M+++G S +  TY+ +I+  
Sbjct: 442 ELFEEMKTKGCHPDEFTYNMLIDSLCSRGRLEEALSLLKEMESSGCSRNVVTYNTLIDGF 501

Query: 476 GKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDK 535
            K   ++ A ++F EM  QG   N+VTYN +I    K R  + A +L   M   G +PDK
Sbjct: 502 CKNKRIEEAEEIFDEMELQGISRNVVTYNTLIDGLCKNRRVEEAAQLMDQMLMEGLKPDK 561

Query: 536 VTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEA 595
            TY+ ++      G + +A  +   M      PD   YG L+    KAG V  A      
Sbjct: 562 FTYNSLLTYFCRAGDIKKAADIVQTMTSNGCEPDSVTYGTLILGLSKAGRVELASRLLRT 621

Query: 596 MLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
           +   G+     T N ++ A  R  + S+A  L + M+  G  P   TY ++ 
Sbjct: 622 VQLKGMVLAPQTYNPVIKALFREKRTSEAVRLFREMMEKGDPPDAVTYKVVF 673



 Score =  138 bits (347), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 116/500 (23%), Positives = 208/500 (41%), Gaps = 48/500 (9%)

Query: 329 QANQVLKQLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVR 388
           Q    L++  D    L   +W  +Q  F      Y  ++  LG+   FG++ ++L +M  
Sbjct: 74  QLRDALRRQSDEDSILDLLDWASKQPNFVPSSVIYEEVLRKLGKDGSFGSMRRVLQEMKH 133

Query: 389 DGCQPNVVTYNRLIHSYGRANYLNEA--------------LDVF---------------K 419
            GC+    T+  LI SY +    +EA              LD F               K
Sbjct: 134 TGCEIRRGTFLILIESYAKFELFDEAVAVVDIMEEEFGLKLDAFTYNFLLNVLVDGNKLK 193

Query: 420 QMQVV-------GCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
            +++V       G +PD  T+  LI    +A  +  A+ M ++M + GLSPD  T++ ++
Sbjct: 194 LVEIVNSRMVSRGIKPDVTTFNILIKALCRAHQIRPAILMMEEMGSYGLSPDEKTFTTLM 253

Query: 473 NCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFE 532
               + G++  A ++  +MV  GC  + VT N+++    K    +  L    +M N GF 
Sbjct: 254 QGFIEEGNMNGALRIREQMVAAGCPSSNVTVNVLVHGYCKEGRIEEVLSFIDEMSNEGFR 313

Query: 533 PDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEW 592
           PD+ T++ ++  L   G++  A  +   M ++ + PD   Y  L+    K G V +A E 
Sbjct: 314 PDRFTFNSLVNGLCRIGHVKHALEILDVMLQEGFDPDIFTYNSLIFGLCKLGEVEEAVEI 373

Query: 593 YEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTY-TLLLSCCT 651
              M+     PN  T N+L+S   +  Q+ +A  L + + + G+ P + T+ +L+   C 
Sbjct: 374 LNQMILRDFSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCL 433

Query: 652 EARSPYDMGFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRESKRG 711
                  M    E+     HP   F  +M       +   +   S L+ M S        
Sbjct: 434 TNNHRLAMELFEEMKTKGCHPDE-FTYNMLIDSLCSRGRLEEALSLLKEMESSGCSRNVV 492

Query: 712 LVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAVKEKGMSYWLINLHVMSDGTAVIALS 771
             + ++D   K+   EEA  ++          D ++ +G+S  ++  + + DG       
Sbjct: 493 TYNTLIDGFCKNKRIEEAEEIF----------DEMELQGISRNVVTYNTLIDGLCKNRRV 542

Query: 772 RTLAWFRKQMLISGVGPSRI 791
              A    QML+ G+ P + 
Sbjct: 543 EEAAQLMDQMLMEGLKPDKF 562



 Score =  131 bits (329), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 99/436 (22%), Positives = 189/436 (43%), Gaps = 5/436 (1%)

Query: 313 LAEEALGNTNYSMDAYQANQVLKQLQD--HTVALGFFNWLRRQAGFKHDEHTYTTMVGIL 370
           + EE  G     +DA+  N +L  L D      +   N      G K D  T+  ++  L
Sbjct: 165 IMEEEFG---LKLDAFTYNFLLNVLVDGNKLKLVEIVNSRMVSRGIKPDVTTFNILIKAL 221

Query: 371 GRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDR 430
            RA Q      ++++M   G  P+  T+  L+  +     +N AL + +QM   GC    
Sbjct: 222 CRAHQIRPAILMMEEMGSYGLSPDEKTFTTLMQGFIEEGNMNGALRIREQMVAAGCPSSN 281

Query: 431 VTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCE 490
           VT   L+  + K G ++  +    +M   G  PD FT++ ++N L + GH++ A ++   
Sbjct: 282 VTVNVLVHGYCKEGRIEEVLSFIDEMSNEGFRPDRFTFNSLVNGLCRIGHVKHALEILDV 341

Query: 491 MVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGY 550
           M+ +G  P++ TYN +I    K    + A+++   M    F P+ VTY+ ++  L     
Sbjct: 342 MLQEGFDPDIFTYNSLIFGLCKLGEVEEAVEILNQMILRDFSPNTVTYNTLISTLCKENQ 401

Query: 551 LDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNS 610
           ++EA  +   +  K  +PD   +  L+       N R A E +E M   G  P+  T N 
Sbjct: 402 VEEATELARVLTSKGILPDVCTFNSLIQGLCLTNNHRLAMELFEEMKTKGCHPDEFTYNM 461

Query: 611 LLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGFCHELMAVSG 670
           L+ +    G+L +A  LL+ M + G   ++ TY  L+    + +   +     + M + G
Sbjct: 462 LIDSLCSRGRLEEALSLLKEMESSGCSRNVVTYNTLIDGFCKNKRIEEAEEIFDEMELQG 521

Query: 671 HPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRESKRGLVDAVVDFLHKSGLKEEAG 730
              ++   +    G       +     ++ M  E  +  +   ++++ +  ++G  ++A 
Sbjct: 522 ISRNVVTYNTLIDGLCKNRRVEEAAQLMDQMLMEGLKPDKFTYNSLLTYFCRAGDIKKAA 581

Query: 731 SVWEVAAQKNVYPDAV 746
            + +        PD+V
Sbjct: 582 DIVQTMTSNGCEPDSV 597



 Score =  122 bits (307), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 87/284 (30%), Positives = 139/284 (48%), Gaps = 11/284 (3%)

Query: 339 DHTVALGFFNWLRRQAGFKHDEHTYTTMVGIL-GRARQFGAINKLLDQMVRDGCQPNVVT 397
           +H +A+  F  ++ + G   DE TY  ++  L  R R   A++ LL +M   GC  NVVT
Sbjct: 436 NHRLAMELFEEMKTK-GCHPDEFTYNMLIDSLCSRGRLEEALS-LLKEMESSGCSRNVVT 493

Query: 398 YNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQ 457
           YN LI  + +   + EA ++F +M++ G   + VTY TLID   K   ++ A  +  +M 
Sbjct: 494 YNTLIDGFCKNKRIEEAEEIFDEMELQGISRNVVTYNTLIDGLCKNRRVEEAAQLMDQML 553

Query: 458 AAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQ 517
             GL PD FTY+ ++    +AG ++ A  +   M + GC P+ VTY  +I   +KA   +
Sbjct: 554 MEGLKPDKFTYNSLLTYFCRAGDIKKAADIVQTMTSNGCEPDSVTYGTLILGLSKAGRVE 613

Query: 518 SALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLV 577
            A +L R +Q  G      TY+ V++ L       EA  +F EM  K   PD   Y ++ 
Sbjct: 614 LASRLLRTVQLKGMVLAPQTYNPVIKALFREKRTSEAVRLFREMMEKGDPPDAVTYKVVF 673

Query: 578 -DLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQ 620
             L    G + +A ++   M   G  P+        S+FL + +
Sbjct: 674 RGLCSGGGPIGEAVDFLVEMTDKGFLPD-------FSSFLMLAE 710



 Score =  119 bits (298), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 77/293 (26%), Positives = 137/293 (46%), Gaps = 1/293 (0%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           G   D  T+ +++  L          +L ++M   GC P+  TYN LI S      L EA
Sbjct: 416 GILPDVCTFNSLIQGLCLTNNHRLAMELFEEMKTKGCHPDEFTYNMLIDSLCSRGRLEEA 475

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
           L + K+M+  GC  + VTY TLID   K   ++ A +++ +M+  G+S +  TY+ +I+ 
Sbjct: 476 LSLLKEMESSGCSRNVVTYNTLIDGFCKNKRIEEAEEIFDEMELQGISRNVVTYNTLIDG 535

Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPD 534
           L K   ++ A QL  +M+ +G  P+  TYN ++    +A + + A  + + M + G EPD
Sbjct: 536 LCKNRRVEEAAQLMDQMLMEGLKPDKFTYNSLLTYFCRAGDIKKAADIVQTMTSNGCEPD 595

Query: 535 KVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYE 594
            VTY  ++  L   G ++ A  +   ++ K  V     Y  ++    +     +A   + 
Sbjct: 596 SVTYGTLILGLSKAGRVELASRLLRTVQLKGMVLAPQTYNPVIKALFREKRTSEAVRLFR 655

Query: 595 AMLQAGLRPNVPTCNSLLSAFLR-VGQLSDAYHLLQGMLNLGLKPSLQTYTLL 646
            M++ G  P+  T   +        G + +A   L  M + G  P   ++ +L
Sbjct: 656 EMMEKGDPPDAVTYKVVFRGLCSGGGPIGEAVDFLVEMTDKGFLPDFSSFLML 708


>gi|334183592|ref|NP_001185295.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75179660|sp|Q9LQ15.1|PPR95_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g62914, mitochondrial; Flags: Precursor
 gi|8493579|gb|AAF75802.1|AC011000_5 Contains a RepB PF|01051 protein domain and multiple PPR PF|01535
           repeats. EST gb|AA728420 comes from this gene
           [Arabidopsis thaliana]
 gi|332195900|gb|AEE34021.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 528

 Score =  153 bits (386), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 89/295 (30%), Positives = 155/295 (52%)

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
           + G+K D  T+TT++  L    +      L+D+MV+ GCQP++VTY  +++   +    +
Sbjct: 176 EMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTD 235

Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
            AL++  +M+    E + V Y T+ID   K    D A++++ +M+  G+ P+  TYS +I
Sbjct: 236 LALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLI 295

Query: 473 NCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFE 532
           +CL   G    A +L  +M+ +   PNLVT++ +I    K      A KLY +M     +
Sbjct: 296 SCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSID 355

Query: 533 PDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEW 592
           P+  TYS ++        L EA+ +   M RK+ +P+   Y  L++ + KA  V K  E 
Sbjct: 356 PNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMEL 415

Query: 593 YEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
           +  M Q GL  N  T  +L+  F +     +A  + + M+++G+ P++ TY +LL
Sbjct: 416 FREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILL 470



 Score =  145 bits (365), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 94/322 (29%), Positives = 165/322 (51%), Gaps = 3/322 (0%)

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
           + G++ D  T  +++       +      L+DQMV  G +P+ VT+  LIH     N  +
Sbjct: 141 KLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKAS 200

Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
           EA+ +  +M   GC+PD VTY  +++   K G  D+A+++  KM+AA +  +   YS +I
Sbjct: 201 EAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVI 260

Query: 473 NCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFE 532
           + L K  H   A  LF EM N+G  PN++TY+ +I+       +  A +L  DM      
Sbjct: 261 DSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKIN 320

Query: 533 PDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEW 592
           P+ VT+S +++     G L +AE ++ EM +++  P+   Y  L++ +     + +A + 
Sbjct: 321 PNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQM 380

Query: 593 YEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTE 652
            E M++    PNV T N+L++ F +  ++     L + M   GL  +  TYT L+    +
Sbjct: 381 LELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQ 440

Query: 653 ARSPYD--MGFCHELMAVSGHP 672
           AR   +  M F  ++++V  HP
Sbjct: 441 ARDCDNAQMVF-KQMVSVGVHP 461



 Score =  143 bits (361), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 92/315 (29%), Positives = 161/315 (51%), Gaps = 7/315 (2%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           G  H+ +TY  ++    R  +      LL +M++ G +P++VT N L++ +   N +++A
Sbjct: 108 GISHNLYTYNILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDA 167

Query: 415 LDVFKQMQVVGCEPDRVTYCTLID---IHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
           + +  QM  +G +PD VT+ TLI    +H KA     A+ +  +M   G  PD  TY  +
Sbjct: 168 VALVDQMVEMGYKPDTVTFTTLIHGLFLHNKAS---EAVALIDRMVQRGCQPDLVTYGAV 224

Query: 472 INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF 531
           +N L K G    A  L  +M       N+V Y+ +I    K R+   AL L+ +M+N G 
Sbjct: 225 VNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGV 284

Query: 532 EPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWE 591
            P+ +TYS ++  L + G   +A  + ++M  +   P+   +  L+D + K G + KA +
Sbjct: 285 RPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEK 344

Query: 592 WYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTY-TLLLSCC 650
            YE M++  + PN+ T +SL++ F  + +L +A  +L+ M+     P++ TY TL+   C
Sbjct: 345 LYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFC 404

Query: 651 TEARSPYDMGFCHEL 665
              R    M    E+
Sbjct: 405 KAKRVDKGMELFREM 419



 Score =  124 bits (311), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 82/285 (28%), Positives = 138/285 (48%), Gaps = 7/285 (2%)

Query: 339 DHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTY 398
           D  +AL   N +   A  + +   Y+T++  L + R       L  +M   G +PNV+TY
Sbjct: 233 DTDLALNLLNKME-AAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITY 291

Query: 399 NRLIH---SYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKK 455
           + LI    +YGR    ++A  +   M      P+ VT+  LID   K G L  A  +Y++
Sbjct: 292 SSLISCLCNYGR---WSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEE 348

Query: 456 MQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARN 515
           M    + P+ FTYS +IN       L  A Q+   M+ + C+PN+VTYN +I    KA+ 
Sbjct: 349 MIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKR 408

Query: 516 YQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGL 575
               ++L+R+M   G   + VTY+ ++         D A+ VF +M      P+   Y +
Sbjct: 409 VDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNI 468

Query: 576 LVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQ 620
           L+D   K G + KA   +E + ++ + P++ T N ++    + G+
Sbjct: 469 LLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGK 513



 Score = 94.7 bits (234), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 67/255 (26%), Positives = 118/255 (46%)

Query: 393 PNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDM 452
           P+++ +++L+ +  + N  +  +   ++M+++G   +  TY  LI+   +   L +A+ +
Sbjct: 76  PSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYNILINCFCRCSRLSLALAL 135

Query: 453 YKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAK 512
             KM   G  PD  T + ++N       +  A  L  +MV  G  P+ VT+  +I     
Sbjct: 136 LGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFL 195

Query: 513 ARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPV 572
                 A+ L   M   G +PD VTY  V+  L   G  D A  +  +M       +  +
Sbjct: 196 HNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVI 255

Query: 573 YGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGML 632
           Y  ++D   K  +   A   +  M   G+RPNV T +SL+S     G+ SDA  LL  M+
Sbjct: 256 YSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMI 315

Query: 633 NLGLKPSLQTYTLLL 647
              + P+L T++ L+
Sbjct: 316 ERKINPNLVTFSALI 330



 Score = 93.6 bits (231), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 66/245 (26%), Positives = 117/245 (47%), Gaps = 1/245 (0%)

Query: 411 LNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSV 470
           L++A+ +F  M      P  + +  L+   AK    D+ +   +KM+  G+S + +TY++
Sbjct: 59  LDDAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYNI 118

Query: 471 IINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAG 530
           +INC  +   L  A  L  +M+  G  P++VT N ++           A+ L   M   G
Sbjct: 119 LINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMG 178

Query: 531 FEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAW 590
           ++PD VT++ ++  L       EA A+   M ++   PD   YG +V+   K G+   A 
Sbjct: 179 YKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLAL 238

Query: 591 EWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSC- 649
                M  A +  NV   ++++ +  +     DA +L   M N G++P++ TY+ L+SC 
Sbjct: 239 NLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCL 298

Query: 650 CTEAR 654
           C   R
Sbjct: 299 CNYGR 303



 Score = 93.2 bits (230), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 50/156 (32%), Positives = 89/156 (57%)

Query: 362 TYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQM 421
           TY++++       + G   ++L+ M+R  C PNVVTYN LI+ + +A  +++ +++F++M
Sbjct: 360 TYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREM 419

Query: 422 QVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHL 481
              G   + VTY TLI    +A   D A  ++K+M + G+ P+  TY+++++ L K G L
Sbjct: 420 SQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKL 479

Query: 482 QAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQ 517
             A  +F  +      P++ TYNIMI    KA  ++
Sbjct: 480 AKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKWK 515


>gi|449459086|ref|XP_004147277.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g59900-like [Cucumis sativus]
 gi|449501214|ref|XP_004161309.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g59900-like [Cucumis sativus]
          Length = 908

 Score =  153 bits (386), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 115/431 (26%), Positives = 190/431 (44%), Gaps = 40/431 (9%)

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMV------------------------- 387
           + G K D  TY T+V  L R ++F    +++D+M+                         
Sbjct: 288 EKGLKADLVTYCTLVLGLCRIQEFEVGMEMMDEMIELGYVPSEAAVSGLIEGLIKMGSIE 347

Query: 388 ----------RDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLI 437
                     + G  PN+  YN +I+S  +   L EA  +F  M   G  P+ VTY  LI
Sbjct: 348 GAFELLNKVGKLGVVPNLFVYNSMINSLCKTGKLEEAELLFSVMAERGLNPNDVTYTILI 407

Query: 438 DIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCI 497
           D   +   LDVA   + KM   G+S   ++Y+ +INC  K G ++ A  LF EMV++G  
Sbjct: 408 DGFGRRAKLDVAFYYFNKMIECGISATVYSYNSMINCQCKFGKMKMAELLFKEMVDKGLK 467

Query: 498 PNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAV 557
           P + TY  +I+   K      A KLY +M   G  P+ VT++ ++  L     + EA  +
Sbjct: 468 PTVATYTSLISGYCKDGLVPKAFKLYHEMTGKGIAPNTVTFTALICGLCQINKMAEASKL 527

Query: 558 FAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLR 617
           F EM     +P+E  Y +L++   + GN  +A+E  + M++ GL P+  T   L++    
Sbjct: 528 FDEMVELKILPNEVTYNVLIEGHCREGNTTRAFELLDEMIKKGLSPDTYTYRPLIAGLCS 587

Query: 618 VGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS-CCTEARSPYDMGFCHELMAVSGHPAHMF 676
            G++S+A   +  + +   +     YT LL   C E R    +    E++   G    M 
Sbjct: 588 TGRVSEAKEFINDLHHKHQRLDELCYTALLQGFCKEGRIKEALVARQEMV---GRGLQMD 644

Query: 677 LLSMPSPGPDGQNVRDHV-GSFLEMMHSEDRESKRGLVDAVVDFLHKSGLKEEAGSVWEV 735
           L+S         N  D +    L  MH +  +    +   ++D   KSG  ++A   W +
Sbjct: 645 LVSYAVLISGALNQNDRILFELLREMHGKGMQPDNVIYTILIDGFIKSGNLKKAFEFWYI 704

Query: 736 AAQKNVYPDAV 746
              +   P++V
Sbjct: 705 MIGEGYVPNSV 715



 Score =  129 bits (325), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 99/301 (32%), Positives = 149/301 (49%), Gaps = 11/301 (3%)

Query: 359 DEHTYTTMVGILGRARQFGAINKLL---DQMVRDGCQPNVVTYNRLIHSYGRANYLNEAL 415
           DE  YT ++   G  ++ G I + L    +MV  G Q ++V+Y  LI   G  N  +  L
Sbjct: 609 DELCYTALLQ--GFCKE-GRIKEALVARQEMVGRGLQMDLVSYAVLIS--GALNQNDRIL 663

Query: 416 -DVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
            ++ ++M   G +PD V Y  LID   K+G L  A + +  M   G  P++ TY+ ++N 
Sbjct: 664 FELLREMHGKGMQPDNVIYTILIDGFIKSGNLKKAFEFWYIMIGEGYVPNSVTYTALVNG 723

Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPD 534
           L KAG++  A  LF  M+    IPN +TY   +    K  N ++AL+L+  M    F  +
Sbjct: 724 LFKAGYVNEAKLLFKRMLVGEAIPNHITYGCFLDHLTKEGNMENALQLHNAMLQGSF-AN 782

Query: 535 KVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYE 594
            VTY+I++      G   EA  +   M     VPD   Y   +  + K GNV  A + +E
Sbjct: 783 TVTYNILIRGYCQIGKFQEAAKLLDVMIGIGMVPDCITYSTFIYEYCKRGNVDAAMDMWE 842

Query: 595 AMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTY-TLLLSCCTEA 653
            MLQ GL+P+    N L+ A    G+L  A  L   M+  GLKP+  TY +L++     A
Sbjct: 843 CMLQRGLKPDRVVFNFLIHACCLNGELDRALQLRNDMMLRGLKPTQSTYHSLMVQLAQRA 902

Query: 654 R 654
           R
Sbjct: 903 R 903



 Score =  129 bits (324), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 106/423 (25%), Positives = 179/423 (42%), Gaps = 54/423 (12%)

Query: 267 VSERFSKPSREMKIPA--GLAPFSRHFASTGNVVESVSRILRQWKWGPLAE----EALGN 320
           + E F +  ++ K  +  G     +H+     V++ V  +     +G L E     AL N
Sbjct: 139 IFENFFESYKKYKFSSSSGFDMLIQHYVQNKRVMDGVLVVNLMRDYGLLPEVRTLSALLN 198

Query: 321 TNYSMDAYQANQVLKQLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAIN 380
                        L +++     L  F+ L   AG K D + YT +V  L   + F    
Sbjct: 199 A------------LARIRKFRQVLELFDTLV-NAGVKPDCYIYTVVVKCLCELKDFNKAK 245

Query: 381 KLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTL---- 436
           ++++Q   +GC  ++VTYN  I+   ++  + EA++V + +   G + D VTYCTL    
Sbjct: 246 EIINQAEGNGCSLSIVTYNVFINGLCKSKRVWEAVEVKRSLGEKGLKADLVTYCTLVLGL 305

Query: 437 -------------------------------IDIHAKAGFLDVAMDMYKKMQAAGLSPDT 465
                                          I+   K G ++ A ++  K+   G+ P+ 
Sbjct: 306 CRIQEFEVGMEMMDEMIELGYVPSEAAVSGLIEGLIKMGSIEGAFELLNKVGKLGVVPNL 365

Query: 466 FTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRD 525
           F Y+ +IN L K G L+ A  LF  M  +G  PN VTY I+I    +      A   +  
Sbjct: 366 FVYNSMINSLCKTGKLEEAELLFSVMAERGLNPNDVTYTILIDGFGRRAKLDVAFYYFNK 425

Query: 526 MQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGN 585
           M   G      +Y+ ++      G +  AE +F EM  K   P    Y  L+  + K G 
Sbjct: 426 MIECGISATVYSYNSMINCQCKFGKMKMAELLFKEMVDKGLKPTVATYTSLISGYCKDGL 485

Query: 586 VRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTL 645
           V KA++ Y  M   G+ PN  T  +L+    ++ ++++A  L   M+ L + P+  TY +
Sbjct: 486 VPKAFKLYHEMTGKGIAPNTVTFTALICGLCQINKMAEASKLFDEMVELKILPNEVTYNV 545

Query: 646 LLS 648
           L+ 
Sbjct: 546 LIE 548



 Score =  127 bits (318), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 78/317 (24%), Positives = 153/317 (48%), Gaps = 1/317 (0%)

Query: 350 LRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRAN 409
           L R  G   +  T + ++  L R R+F  + +L D +V  G +P+   Y  ++       
Sbjct: 180 LMRDYGLLPEVRTLSALLNALARIRKFRQVLELFDTLVNAGVKPDCYIYTVVVKCLCELK 239

Query: 410 YLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYS 469
             N+A ++  Q +  GC    VTY   I+   K+  +  A+++ + +   GL  D  TY 
Sbjct: 240 DFNKAKEIINQAEGNGCSLSIVTYNVFINGLCKSKRVWEAVEVKRSLGEKGLKADLVTYC 299

Query: 470 VIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNA 529
            ++  L +    +   ++  EM+  G +P+    + +I    K  + + A +L   +   
Sbjct: 300 TLVLGLCRIQEFEVGMEMMDEMIELGYVPSEAAVSGLIEGLIKMGSIEGAFELLNKVGKL 359

Query: 530 GFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKA 589
           G  P+   Y+ ++  L   G L+EAE +F+ M  +   P++  Y +L+D +G+   +  A
Sbjct: 360 GVVPNLFVYNSMINSLCKTGKLEEAELLFSVMAERGLNPNDVTYTILIDGFGRRAKLDVA 419

Query: 590 WEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS- 648
           + ++  M++ G+   V + NS+++   + G++  A  L + M++ GLKP++ TYT L+S 
Sbjct: 420 FYYFNKMIECGISATVYSYNSMINCQCKFGKMKMAELLFKEMVDKGLKPTVATYTSLISG 479

Query: 649 CCTEARSPYDMGFCHEL 665
            C +   P      HE+
Sbjct: 480 YCKDGLVPKAFKLYHEM 496



 Score =  111 bits (277), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 93/374 (24%), Positives = 173/374 (46%), Gaps = 32/374 (8%)

Query: 297 VVESVSRILRQWKWGPLAEEALGNTNYS--MDAYQANQVL-KQLQDHTVALGFFNWLRRQ 353
           V+E + R  + WK       A  N++ S  ++ +   +VL + L D  +AL FFN+L   
Sbjct: 43  VLEQIVRGNQSWKI------AFNNSSISGNIEPHHVEKVLIRTLDDSRLALRFFNFLGLH 96

Query: 354 AGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVT---------------- 397
             F H   ++  ++  L +   F   + LL  ++  G  P+ +                 
Sbjct: 97  RNFHHSTASFCILIHSLLQNNLFWPASSLLQTLLLRGLNPHQIFENFFESYKKYKFSSSS 156

Query: 398 -YNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKM 456
            ++ LI  Y +   + + + V   M+  G  P+  T   L++  A+       ++++  +
Sbjct: 157 GFDMLIQHYVQNKRVMDGVLVVNLMRDYGLLPEVRTLSALLNALARIRKFRQVLELFDTL 216

Query: 457 QAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNY 516
             AG+ PD + Y+V++ CL +      A ++  +    GC  ++VTYN+ I    K++  
Sbjct: 217 VNAGVKPDCYIYTVVVKCLCELKDFNKAKEIINQAEGNGCSLSIVTYNVFINGLCKSKRV 276

Query: 517 QSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEA---VFAEMRRKNWVPDEPVY 573
             A+++ R +   G + D VTY  +  VLG C  + E E    +  EM    +VP E   
Sbjct: 277 WEAVEVKRSLGEKGLKADLVTYCTL--VLGLC-RIQEFEVGMEMMDEMIELGYVPSEAAV 333

Query: 574 GLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLN 633
             L++   K G++  A+E    + + G+ PN+   NS++++  + G+L +A  L   M  
Sbjct: 334 SGLIEGLIKMGSIEGAFELLNKVGKLGVVPNLFVYNSMINSLCKTGKLEEAELLFSVMAE 393

Query: 634 LGLKPSLQTYTLLL 647
            GL P+  TYT+L+
Sbjct: 394 RGLNPNDVTYTILI 407



 Score = 75.5 bits (184), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 66/239 (27%), Positives = 102/239 (42%), Gaps = 48/239 (20%)

Query: 346 FFNWLRRQ--AGFKHDEHTYTTMV------GILGRARQFGAINKLLDQMVRDGCQPNVVT 397
            F  LR     G + D   YT ++      G L +A +F  I      M+ +G  PN VT
Sbjct: 663 LFELLREMHGKGMQPDNVIYTILIDGFIKSGNLKKAFEFWYI------MIGEGYVPNSVT 716

Query: 398 YNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKM- 456
           Y  L++   +A Y+NEA  +FK+M V    P+ +TY   +D   K G ++ A+ ++  M 
Sbjct: 717 YTALVNGLFKAGYVNEAKLLFKRMLVGEAIPNHITYGCFLDHLTKEGNMENALQLHNAML 776

Query: 457 ------------------------QAA---------GLSPDTFTYSVIINCLGKAGHLQA 483
                                   +AA         G+ PD  TYS  I    K G++ A
Sbjct: 777 QGSFANTVTYNILIRGYCQIGKFQEAAKLLDVMIGIGMVPDCITYSTFIYEYCKRGNVDA 836

Query: 484 AHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVM 542
           A  ++  M+ +G  P+ V +N +I           AL+L  DM   G +P + TY  +M
Sbjct: 837 AMDMWECMLQRGLKPDRVVFNFLIHACCLNGELDRALQLRNDMMLRGLKPTQSTYHSLM 895



 Score = 58.5 bits (140), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 36/120 (30%), Positives = 59/120 (49%)

Query: 362 TYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQM 421
           TY  ++    +  +F    KLLD M+  G  P+ +TY+  I+ Y +   ++ A+D+++ M
Sbjct: 785 TYNILIRGYCQIGKFQEAAKLLDVMIGIGMVPDCITYSTFIYEYCKRGNVDAAMDMWECM 844

Query: 422 QVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHL 481
              G +PDRV +  LI      G LD A+ +   M   GL P   TY  ++  L +   L
Sbjct: 845 LQRGLKPDRVVFNFLIHACCLNGELDRALQLRNDMMLRGLKPTQSTYHSLMVQLAQRARL 904


>gi|356560325|ref|XP_003548443.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
           mitochondrial-like [Glycine max]
          Length = 746

 Score =  153 bits (386), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 119/516 (23%), Positives = 236/516 (45%), Gaps = 54/516 (10%)

Query: 291 FASTGNVVESVSRILRQWKWGPLAE-----EALGNTNYSMDAYQANQVLKQL---QDHTV 342
           F+ TG +V     ++R  +  P  E       LG      D ++  Q++ +L   Q + V
Sbjct: 207 FSVTGEIV--FGELVRSGRSFPDGEVVGLVAKLGERGVFPDGFKLTQLVGKLCGDQKNGV 264

Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLI 402
           A    + + R  G   D  +   ++  LGR R    +N+LL +M +   +P+VVT+  L+
Sbjct: 265 AWEVLHCVMRLGG-AVDAASCNALLTWLGRGRDIKRMNELLAEMEKRKIRPSVVTFGILV 323

Query: 403 HSYGRANYLNEALDVFKQMQV------VGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKM 456
           +   +A  ++EAL VF +++       VG EPD V + TLID   K G  +  + + ++M
Sbjct: 324 NHLCKARRIDEALQVFDRLRGKGGSNWVGVEPDVVLFNTLIDGLCKVGKEEDGLSLLEEM 383

Query: 457 QAAGLS-PDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMI-------- 507
           +   ++ P+T TY+ +I+   KAG+   AH+LF +M  +G  PN++T N ++        
Sbjct: 384 KMGNINRPNTVTYNCLIDGFFKAGNFDRAHELFRQMNEEGVQPNVITLNTLVDGLCKHGR 443

Query: 508 --------------ALQAKARNYQS-------------ALKLYRDMQNAGFEPDKVTYSI 540
                          L+  A  Y +             A++ + +M ++G  PD V Y  
Sbjct: 444 VHRAVEFFNEMKGKGLKGNAATYTALISAFCGVNNINRAMQCFEEMLSSGCSPDAVVYYS 503

Query: 541 VMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAG 600
           ++  L   G +++A  V ++++   +  D   Y +L+  + K   + + +E    M + G
Sbjct: 504 LISGLCIAGRMNDASVVVSKLKLAGFSLDRSCYNVLISGFCKKKKLERVYELLTEMEETG 563

Query: 601 LRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTY-TLLLSCCTEARSPYDM 659
           ++P+  T N+L+S   + G  + A  +++ M+  GL+PS+ TY  ++ + C++      M
Sbjct: 564 VKPDTITYNTLISYLGKTGDFATASKVMEKMIKEGLRPSVVTYGAIIHAYCSKKNVDEGM 623

Query: 660 GFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRESKRGLVDAVVDF 719
               E+ + S  P +  + ++        N  D   S +E M  +         +A++  
Sbjct: 624 KIFGEMCSTSKVPPNTVIYNILIDALCRNNDVDRAISLMEDMKVKRVRPNTTTYNAILKG 683

Query: 720 LHKSGLKEEAGSVWEVAAQKNVYPDAVKEKGMSYWL 755
           +    +  +A  + +   ++   PD +  + ++ WL
Sbjct: 684 VRDKKMLHKAFELMDRMVEEACRPDYITMEVLTEWL 719



 Score =  129 bits (324), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 78/301 (25%), Positives = 143/301 (47%), Gaps = 2/301 (0%)

Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLI 402
           A+ FFN ++ + G K +  TYT ++             +  ++M+  GC P+ V Y  LI
Sbjct: 447 AVEFFNEMKGK-GLKGNAATYTALISAFCGVNNINRAMQCFEEMLSSGCSPDAVVYYSLI 505

Query: 403 HSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLS 462
                A  +N+A  V  ++++ G   DR  Y  LI    K   L+   ++  +M+  G+ 
Sbjct: 506 SGLCIAGRMNDASVVVSKLKLAGFSLDRSCYNVLISGFCKKKKLERVYELLTEMEETGVK 565

Query: 463 PDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKL 522
           PDT TY+ +I+ LGK G    A ++  +M+ +G  P++VTY  +I      +N    +K+
Sbjct: 566 PDTITYNTLISYLGKTGDFATASKVMEKMIKEGLRPSVVTYGAIIHAYCSKKNVDEGMKI 625

Query: 523 YRDM-QNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWG 581
           + +M   +   P+ V Y+I+++ L     +D A ++  +M+ K   P+   Y  ++    
Sbjct: 626 FGEMCSTSKVPPNTVIYNILIDALCRNNDVDRAISLMEDMKVKRVRPNTTTYNAILKGVR 685

Query: 582 KAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQ 641
               + KA+E  + M++   RP+  T   L      VG++    H ++G  +     S Q
Sbjct: 686 DKKMLHKAFELMDRMVEEACRPDYITMEVLTEWLSAVGEIEKLKHFVEGYQDSSYPASSQ 745

Query: 642 T 642
           T
Sbjct: 746 T 746


>gi|224123236|ref|XP_002330266.1| predicted protein [Populus trichocarpa]
 gi|222871301|gb|EEF08432.1| predicted protein [Populus trichocarpa]
          Length = 590

 Score =  153 bits (386), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 103/337 (30%), Positives = 159/337 (47%), Gaps = 37/337 (10%)

Query: 347 FNWLRRQAGFKHDEHTYTTMV-GILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSY 405
           F  L    G K +  TY T++ G   R R  GA   + D M   G +P+  TY   I   
Sbjct: 213 FIGLMEALGIKPNVVTYNTIIHGYCSRGRVEGA-RMIFDLMKCRGVKPDSYTYGSFISGM 271

Query: 406 GRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDT 465
            +   L EA  + ++M+ +G  P  VTY TLID +   G L++A D   KM   GL P  
Sbjct: 272 CKEGKLEEASGMLEKMKEIGLRPTAVTYNTLIDGYCNKGNLEMAFDYRDKMVREGLMPTV 331

Query: 466 FTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRD 525
            TY+++I+ L     +  A  +  EM  +G +P+ VTYNI+I    +  N + A  L+ +
Sbjct: 332 STYNMLIHALFLDCKMDEADGIIKEMSEKGLVPDSVTYNILINGYCRCGNVKKAFTLHDE 391

Query: 526 MQNAGFEPDKVTYSIVMEVL---------------------------------GHC--GY 550
           M + G +P +VTY+ ++ VL                                 GHC  G 
Sbjct: 392 MISKGIQPTRVTYTSLIYVLSKRGRMKQADDLFEKIVRKGIFPDLIMFNALIDGHCANGN 451

Query: 551 LDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNS 610
           +D A A+  EM +   VPDE  +  L+    + G V  A E  E M   G++P+  + N+
Sbjct: 452 MDRAFAMLKEMDQMKVVPDEVTFNTLMQGRCREGKVEAARELIEEMKSRGIKPDHISYNT 511

Query: 611 LLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
           L+S + + G + DA+ +   ML++G  P+L TY  L+
Sbjct: 512 LISGYSKRGDMKDAFRVRDEMLSIGFNPTLLTYNALI 548



 Score =  147 bits (372), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 86/299 (28%), Positives = 149/299 (49%), Gaps = 4/299 (1%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           ++ G +    TY T++                D+MVR+G  P V TYN LIH+      +
Sbjct: 288 KEIGLRPTAVTYNTLIDGYCNKGNLEMAFDYRDKMVREGLMPTVSTYNMLIHALFLDCKM 347

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
           +EA  + K+M   G  PD VTY  LI+ + + G +  A  ++ +M + G+ P   TY+ +
Sbjct: 348 DEADGIIKEMSEKGLVPDSVTYNILINGYCRCGNVKKAFTLHDEMISKGIQPTRVTYTSL 407

Query: 472 INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF 531
           I  L K G ++ A  LF ++V +G  P+L+ +N +I       N   A  + ++M     
Sbjct: 408 IYVLSKRGRMKQADDLFEKIVRKGIFPDLIMFNALIDGHCANGNMDRAFAMLKEMDQMKV 467

Query: 532 EPDKVTYSIVMEVLGHC--GYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKA 589
            PD+VT++ +M+  G C  G ++ A  +  EM+ +   PD   Y  L+  + K G+++ A
Sbjct: 468 VPDEVTFNTLMQ--GRCREGKVEAARELIEEMKSRGIKPDHISYNTLISGYSKRGDMKDA 525

Query: 590 WEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
           +   + ML  G  P + T N+L+    +  +   A  LL+ M++ G+ P+  TY  L+ 
Sbjct: 526 FRVRDEMLSIGFNPTLLTYNALIQGLCKNEEGDHAEQLLKEMISKGITPNDNTYLSLIE 584



 Score =  132 bits (332), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 79/267 (29%), Positives = 138/267 (51%), Gaps = 2/267 (0%)

Query: 382 LLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHA 441
           L  +M R   + +VVT+N +I+   +   L +A +    M+ +G +P+ VTY T+I  + 
Sbjct: 178 LYAEMFRMRIKSSVVTFNIMINVLCKEGKLKKAKEFIGLMEALGIKPNVVTYNTIIHGYC 237

Query: 442 KAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLV 501
             G ++ A  ++  M+  G+ PD++TY   I+ + K G L+ A  +  +M   G  P  V
Sbjct: 238 SRGRVEGARMIFDLMKCRGVKPDSYTYGSFISGMCKEGKLEEASGMLEKMKEIGLRPTAV 297

Query: 502 TYNIMIALQAKARNYQSALKLYRD-MQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAE 560
           TYN +I       N + A   YRD M   G  P   TY++++  L     +DEA+ +  E
Sbjct: 298 TYNTLIDGYCNKGNLEMAFD-YRDKMVREGLMPTVSTYNMLIHALFLDCKMDEADGIIKE 356

Query: 561 MRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQ 620
           M  K  VPD   Y +L++ + + GNV+KA+  ++ M+  G++P   T  SL+    + G+
Sbjct: 357 MSEKGLVPDSVTYNILINGYCRCGNVKKAFTLHDEMISKGIQPTRVTYTSLIYVLSKRGR 416

Query: 621 LSDAYHLLQGMLNLGLKPSLQTYTLLL 647
           +  A  L + ++  G+ P L  +  L+
Sbjct: 417 MKQADDLFEKIVRKGIFPDLIMFNALI 443



 Score =  107 bits (267), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 98/421 (23%), Positives = 176/421 (41%), Gaps = 45/421 (10%)

Query: 396 VTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKK 455
           V Y+ LI +       ++A + F  M+  G  P       ++ +  K+   + A  +Y +
Sbjct: 122 VLYDLLIRACCELKRGDDAFECFDMMKGKGVIPHVHACNDMLSLFLKSNRTEKAWVLYAE 181

Query: 456 MQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARN 515
           M    +     T++++IN L K G L+ A +    M   G  PN+VTYN +I        
Sbjct: 182 MFRMRIKSSVVTFNIMINVLCKEGKLKKAKEFIGLMEALGIKPNVVTYNTIIHGYCSRGR 241

Query: 516 YQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGL 575
            + A  ++  M+  G +PD  TY   +  +   G L+EA  +  +M+     P    Y  
Sbjct: 242 VEGARMIFDLMKCRGVKPDSYTYGSFISGMCKEGKLEEASGMLEKMKEIGLRPTAVTYNT 301

Query: 576 LVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLG 635
           L+D +   GN+  A+++ + M++ GL P V T N L+ A     ++ +A  +++ M   G
Sbjct: 302 LIDGYCNKGNLEMAFDYRDKMVREGLMPTVSTYNMLIHALFLDCKMDEADGIIKEMSEKG 361

Query: 636 LKPSLQTYTLLLSCCTEARSPYDMGFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVG 695
           L P   TY +L++           G+C       G+    F L                 
Sbjct: 362 LVPDSVTYNILIN-----------GYCR-----CGNVKKAFTLH---------------- 389

Query: 696 SFLEMMHSEDRESKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAVKEKGMSYWL 755
              + M S+  +  R    +++  L K G  ++A  ++E   +K ++PD +    M   L
Sbjct: 390 ---DEMISKGIQPTRVTYTSLIYVLSKRGRMKQADDLFEKIVRKGIFPDLI----MFNAL 442

Query: 756 INLHVMSDGTAVIALSRTLAWFRKQMLISGVGPSRIDIVTGWGRRSRVTGTSLVRQAVQE 815
           I+ H  ++G     + R  A   K+M    V P  +   T    R R       R+ ++E
Sbjct: 443 IDGHC-ANGN----MDRAFAML-KEMDQMKVVPDEVTFNTLMQGRCREGKVEAARELIEE 496

Query: 816 L 816
           +
Sbjct: 497 M 497



 Score = 96.3 bits (238), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 52/193 (26%), Positives = 106/193 (54%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           G +    TYT+++ +L +  +    + L +++VR G  P+++ +N LI  +     ++ A
Sbjct: 396 GIQPTRVTYTSLIYVLSKRGRMKQADDLFEKIVRKGIFPDLIMFNALIDGHCANGNMDRA 455

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
             + K+M  +   PD VT+ TL+    + G ++ A ++ ++M++ G+ PD  +Y+ +I+ 
Sbjct: 456 FAMLKEMDQMKVVPDEVTFNTLMQGRCREGKVEAARELIEEMKSRGIKPDHISYNTLISG 515

Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPD 534
             K G ++ A ++  EM++ G  P L+TYN +I    K      A +L ++M + G  P+
Sbjct: 516 YSKRGDMKDAFRVRDEMLSIGFNPTLLTYNALIQGLCKNEEGDHAEQLLKEMISKGITPN 575

Query: 535 KVTYSIVMEVLGH 547
             TY  ++E +G+
Sbjct: 576 DNTYLSLIEGIGN 588



 Score = 60.1 bits (144), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 66/341 (19%), Positives = 140/341 (41%), Gaps = 34/341 (9%)

Query: 497 IPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEA 556
           I   V Y+++I    + +    A + +  M+  G  P     + ++ +       ++A  
Sbjct: 118 IKTYVLYDLLIRACCELKRGDDAFECFDMMKGKGVIPHVHACNDMLSLFLKSNRTEKAWV 177

Query: 557 VFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFL 616
           ++AEM R         + +++++  K G ++KA E+   M   G++PNV T N+++  + 
Sbjct: 178 LYAEMFRMRIKSSVVTFNIMINVLCKEGKLKKAKEFIGLMEALGIKPNVVTYNTIIHGYC 237

Query: 617 RVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS-CCTEARSPYDMGFCHELMAVSGHPAHM 675
             G++  A  +   M   G+KP   TY   +S  C E +     G   ++  +   P  +
Sbjct: 238 SRGRVEGARMIFDLMKCRGVKPDSYTYGSFISGMCKEGKLEEASGMLEKMKEIGLRPTAV 297

Query: 676 FLLSMPSPGPDGQNVRDHVGSFLEMMHS-EDRESKRGLVDAVVDF---LHKSGLK---EE 728
              ++     +  N        LEM     D+  + GL+  V  +   +H   L    +E
Sbjct: 298 TYNTLIDGYCNKGN--------LEMAFDYRDKMVREGLMPTVSTYNMLIHALFLDCKMDE 349

Query: 729 AGSVWEVAAQKNVYPDAVKEKGMSYWLINLHVMSDGTAVIALSRTLAWFRKQMLISGVGP 788
           A  + +  ++K + PD+V            +++ +G       +       +M+  G+ P
Sbjct: 350 ADGIIKEMSEKGLVPDSV----------TYNILINGYCRCGNVKKAFTLHDEMISKGIQP 399

Query: 789 SRI---DIVTGWGRRSRVTGT-----SLVRQAVQELLHMFS 821
           +R+    ++    +R R+         +VR+ +   L MF+
Sbjct: 400 TRVTYTSLIYVLSKRGRMKQADDLFEKIVRKGIFPDLIMFN 440


>gi|296089633|emb|CBI39452.3| unnamed protein product [Vitis vinifera]
          Length = 718

 Score =  153 bits (386), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 101/362 (27%), Positives = 180/362 (49%), Gaps = 13/362 (3%)

Query: 299 ESVSRILRQWKWGPLAEEALGNTNYSMDAYQANQVLKQLQDHTVALGFFNWLRRQAGFKH 358
           ++++R++    W    + +L     S+      Q L+ ++    AL FF W+  + GF H
Sbjct: 67  QAMARLINTEPWSHELQSSLAELAPSLSKTTVLQTLQLIRTPAKALHFFRWVEAK-GFTH 125

Query: 359 DEHTYTTMVGILGRARQFGAINKLLDQMVRD---GCQPNVVTYNRLIHSYGRANYLNEAL 415
           +E +Y  M+ ILGR+R   A    +  + +      +     +N LI SYG A    E++
Sbjct: 126 NEQSYFLMIEILGRSRNLNAARNFVFSIEKKSGGAVKLGDRFFNSLIRSYGWAGLFQESI 185

Query: 416 DVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKM-QAAGLSPDTFTYSVIINC 474
            VFK M+ +G  P  VT+ +L+ I  K G   +A  ++ +M    G++PDT+T++++I  
Sbjct: 186 KVFKTMKEIGVSPSVVTFNSLLSIVLKRGRTSMAKQLFDEMLDTYGVTPDTYTFNILIRG 245

Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDM--QNAGFE 532
                 +      F EM    C P++VTYN ++    +A   + A  + + M  ++    
Sbjct: 246 FCMNSMVDEGFWFFKEMSRFKCDPDVVTYNTLVDGLCRAGKVKIAHNVVKGMVKKSPNLS 305

Query: 533 PDKVTYSIVMEVLGHCGYLDEAEA--VFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAW 590
           P+ VTY+ ++   G+C   D AEA  + AEM  +   P++  Y  L+    +A  + K  
Sbjct: 306 PNVVTYTTLIR--GYCMKQDMAEALSLLAEMVSRGLKPNKITYNTLIQGLCEAQKLDKIK 363

Query: 591 EWYEAML-QAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL-S 648
           E  E M+   G  P+  T N+L+ A   +G+L +A+ + + M  L ++P   TY++L+ S
Sbjct: 364 EILEGMVGDGGFIPDTCTLNTLIKAHCTMGKLEEAFSVFEKMSELRVQPDSATYSVLVRS 423

Query: 649 CC 650
            C
Sbjct: 424 LC 425



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 107/446 (23%), Positives = 196/446 (43%), Gaps = 27/446 (6%)

Query: 362 TYTTMVGILGRARQFGAINKLLDQMVRD-GCQPNVVTYNRLIHSYGRANYLNEALDVFKQ 420
           T+ +++ I+ +  +     +L D+M+   G  P+  T+N LI  +   + ++E    FK+
Sbjct: 202 TFNSLLSIVLKRGRTSMAKQLFDEMLDTYGVTPDTYTFNILIRGFCMNSMVDEGFWFFKE 261

Query: 421 MQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKM--QAAGLSPDTFTYSVIINCLGKA 478
           M    C+PD VTY TL+D   +AG + +A ++ K M  ++  LSP+  TY+ +I      
Sbjct: 262 MSRFKCDPDVVTYNTLVDGLCRAGKVKIAHNVVKGMVKKSPNLSPNVVTYTTLIRGYCMK 321

Query: 479 GHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDM-QNAGFEPDKVT 537
             +  A  L  EMV++G  PN +TYN +I    +A+      ++   M  + GF PD  T
Sbjct: 322 QDMAEALSLLAEMVSRGLKPNKITYNTLIQGLCEAQKLDKIKEILEGMVGDGGFIPDTCT 381

Query: 538 YSIVMEVLGHC--GYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEA 595
            + +++   HC  G L+EA +VF +M      PD   Y +LV    + G+ R+A E+++ 
Sbjct: 382 LNTLIK--AHCTMGKLEEAFSVFEKMSELRVQPDSATYSVLVRSLCQRGDFRRAEEFFDE 439

Query: 596 MLQ-------AGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
           + +        G +P V   N +       G+   A  + + ++  G +      TL+L 
Sbjct: 440 LAEKEILLHDVGCKPLVAAYNPMFEYLCSNGKTKKAERVFRQLMKRGTQDPPSYKTLILG 499

Query: 649 CCTEARSPYDMGFCHELMAVSGHP-AHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRE 707
            C E            ++     P A  + L +      G  V  H    LE M      
Sbjct: 500 HCREGTPEAGFDLLVLMLRRDFVPDAETYGLMIDGLLKKGDPVLAHKS--LEKMLKSSHL 557

Query: 708 SKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAVKEKGMSYWLINLHVMSDGTAV 767
               +  +++  L + G   E+ S+ ++  ++ +  +           ++ H M +  + 
Sbjct: 558 PTTAIFHSILAALVEKGCAHESASLVKLMLERRIRQNID---------LSTHTMEELVSF 608

Query: 768 IALSRTLAWFRKQMLISGVGPSRIDI 793
           +  SR L   +K +L S      +DI
Sbjct: 609 LCQSRKLLEAQKMLLFSLEKRQSVDI 634


>gi|449451888|ref|XP_004143692.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g16880-like [Cucumis sativus]
 gi|449529106|ref|XP_004171542.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g16880-like [Cucumis sativus]
          Length = 783

 Score =  153 bits (386), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 95/304 (31%), Positives = 152/304 (50%), Gaps = 3/304 (0%)

Query: 359 DEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVF 418
           D  TY T++    + R    +  L+++M + G + N VTYN ++    +   + EA    
Sbjct: 352 DVVTYNTLIDGCSQWRDSSEVYSLIEEMDKKGVKCNAVTYNIILKWMCKKGNMTEATTTL 411

Query: 419 KQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKA 478
            +M+  G  PD VTY TLI  + KAG +  A  M  +M + GL  DT+T + I++CL   
Sbjct: 412 DKMEENGLSPDCVTYNTLIGAYCKAGKMGKAFRMMDEMTSKGLKIDTWTLNTILHCLCVE 471

Query: 479 GHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTY 538
             L  A+ L C    +G I + V+Y I+I    K      AL L+ +M+     P  +TY
Sbjct: 472 KKLDEAYNLLCSASKRGYILDEVSYGILILGYFKDEKGDRALNLWDEMKERQIMPSTITY 531

Query: 539 SIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQ 598
           + V+  L     +D+A     EM     VPDE  Y +++  +   GNV KA++++  M++
Sbjct: 532 NSVIGGLCQSRKVDQAIDKLNEMLENGLVPDETTYNIIIHGFCLEGNVEKAFQFHNEMIE 591

Query: 599 AGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTY-TLLLSCCTEAR--S 655
              +P+V TCN LL    R G L  A  L   +++ G    + TY T++ S C E +  +
Sbjct: 592 NLFKPDVYTCNILLRGLCREGMLEKALKLFNTLVSKGKDIDVVTYNTIISSLCKEGKFEN 651

Query: 656 PYDM 659
            YD+
Sbjct: 652 AYDL 655



 Score =  127 bits (319), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 84/323 (26%), Positives = 157/323 (48%), Gaps = 5/323 (1%)

Query: 336 QLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAI---NKLLDQMVRDGCQ 392
           Q+    +A   FN ++R   ++ +  T  T++  L R     +I    ++L   ++ G  
Sbjct: 152 QMDQPHLATQIFNKMKR-LNYRPNLLTCNTLMNSLVRYPSSSSILLARQVLKDSIKLGVV 210

Query: 393 PNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDM 452
           PN  ++N LI+ Y   + + +ALD   +M   GC PD V+Y T++D   K   L  A D+
Sbjct: 211 PNTNSFNILIYGYCLESKVKDALDWVNKMSEFGCVPDTVSYNTILDALLKRRLLQEARDL 270

Query: 453 YKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAK 512
              M++ GLSP+  TY++++    + G L+ A ++   M     +P + TYN+++     
Sbjct: 271 LLDMKSKGLSPNKHTYNMLVCGYCRLGLLKEATKVIEIMTRNNLLPTVWTYNMLVNGFCN 330

Query: 513 ARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPV 572
                 A ++  +M+     PD VTY+ +++         E  ++  EM +K    +   
Sbjct: 331 DGKIDEAFRIRDEMEKMNVLPDVVTYNTLIDGCSQWRDSSEVYSLIEEMDKKGVKCNAVT 390

Query: 573 YGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGML 632
           Y +++    K GN+ +A    + M + GL P+  T N+L+ A+ + G++  A+ ++  M 
Sbjct: 391 YNIILKWMCKKGNMTEATTTLDKMEENGLSPDCVTYNTLIGAYCKAGKMGKAFRMMDEMT 450

Query: 633 NLGLKPSLQTYTLLLSC-CTEAR 654
           + GLK    T   +L C C E +
Sbjct: 451 SKGLKIDTWTLNTILHCLCVEKK 473



 Score =  118 bits (296), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 68/246 (27%), Positives = 123/246 (50%)

Query: 383 LDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAK 442
           +++M   GC P+ V+YN ++ +  +   L EA D+   M+  G  P++ TY  L+  + +
Sbjct: 236 VNKMSEFGCVPDTVSYNTILDALLKRRLLQEARDLLLDMKSKGLSPNKHTYNMLVCGYCR 295

Query: 443 AGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVT 502
            G L  A  + + M    L P  +TY++++N     G +  A ++  EM     +P++VT
Sbjct: 296 LGLLKEATKVIEIMTRNNLLPTVWTYNMLVNGFCNDGKIDEAFRIRDEMEKMNVLPDVVT 355

Query: 503 YNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMR 562
           YN +I   ++ R+      L  +M   G + + VTY+I+++ +   G + EA     +M 
Sbjct: 356 YNTLIDGCSQWRDSSEVYSLIEEMDKKGVKCNAVTYNIILKWMCKKGNMTEATTTLDKME 415

Query: 563 RKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLS 622
                PD   Y  L+  + KAG + KA+   + M   GL+ +  T N++L       +L 
Sbjct: 416 ENGLSPDCVTYNTLIGAYCKAGKMGKAFRMMDEMTSKGLKIDTWTLNTILHCLCVEKKLD 475

Query: 623 DAYHLL 628
           +AY+LL
Sbjct: 476 EAYNLL 481



 Score =  102 bits (254), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 71/285 (24%), Positives = 130/285 (45%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
            + G   D  TY T++G   +A + G   +++D+M   G + +  T N ++H       L
Sbjct: 415 EENGLSPDCVTYNTLIGAYCKAGKMGKAFRMMDEMTSKGLKIDTWTLNTILHCLCVEKKL 474

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
           +EA ++       G   D V+Y  LI  + K    D A++++ +M+   + P T TY+ +
Sbjct: 475 DEAYNLLCSASKRGYILDEVSYGILILGYFKDEKGDRALNLWDEMKERQIMPSTITYNSV 534

Query: 472 INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF 531
           I  L ++  +  A     EM+  G +P+  TYNI+I       N + A + + +M    F
Sbjct: 535 IGGLCQSRKVDQAIDKLNEMLENGLVPDETTYNIIIHGFCLEGNVEKAFQFHNEMIENLF 594

Query: 532 EPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWE 591
           +PD  T +I++  L   G L++A  +F  +  K    D   Y  ++    K G    A++
Sbjct: 595 KPDVYTCNILLRGLCREGMLEKALKLFNTLVSKGKDIDVVTYNTIISSLCKEGKFENAYD 654

Query: 592 WYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGL 636
               M    L P+  T   +++A    G++ +A      M+  G+
Sbjct: 655 LLTEMEAKKLGPDQYTYKVIIAALTDAGRIKEAEEFTLKMVESGI 699



 Score = 97.4 bits (241), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 75/287 (26%), Positives = 142/287 (49%), Gaps = 8/287 (2%)

Query: 366 MVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVG 425
           ++  +   RQ   ++KL+    RD  +P+    +  I +Y + +  + A  +F +M+ + 
Sbjct: 112 LISFISSDRQH-ELHKLILHPTRDLPEPSKELLDTSIGAYVQMDQPHLATQIFNKMKRLN 170

Query: 426 CEPDRVTYCTLIDI---HAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQ 482
             P+ +T  TL++    +  +  + +A  + K     G+ P+T +++++I        ++
Sbjct: 171 YRPNLLTCNTLMNSLVRYPSSSSILLARQVLKDSIKLGVVPNTNSFNILIYGYCLESKVK 230

Query: 483 AAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVM 542
            A     +M   GC+P+ V+YN ++    K R  Q A  L  DM++ G  P+K TY+  M
Sbjct: 231 DALDWVNKMSEFGCVPDTVSYNTILDALLKRRLLQEARDLLLDMKSKGLSPNKHTYN--M 288

Query: 543 EVLGHC--GYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAG 600
            V G+C  G L EA  V   M R N +P    Y +LV+ +   G + +A+   + M +  
Sbjct: 289 LVCGYCRLGLLKEATKVIEIMTRNNLLPTVWTYNMLVNGFCNDGKIDEAFRIRDEMEKMN 348

Query: 601 LRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
           + P+V T N+L+    +    S+ Y L++ M   G+K +  TY ++L
Sbjct: 349 VLPDVVTYNTLIDGCSQWRDSSEVYSLIEEMDKKGVKCNAVTYNIIL 395



 Score = 95.1 bits (235), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 59/217 (27%), Positives = 108/217 (49%), Gaps = 2/217 (0%)

Query: 355 GFKHDEHTYTTMV-GILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNE 413
           G+  DE +Y  ++ G     +   A+N L D+M      P+ +TYN +I    ++  +++
Sbjct: 488 GYILDEVSYGILILGYFKDEKGDRALN-LWDEMKERQIMPSTITYNSVIGGLCQSRKVDQ 546

Query: 414 ALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIIN 473
           A+D   +M   G  PD  TY  +I      G ++ A   + +M      PD +T ++++ 
Sbjct: 547 AIDKLNEMLENGLVPDETTYNIIIHGFCLEGNVEKAFQFHNEMIENLFKPDVYTCNILLR 606

Query: 474 CLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEP 533
            L + G L+ A +LF  +V++G   ++VTYN +I+   K   +++A  L  +M+     P
Sbjct: 607 GLCREGMLEKALKLFNTLVSKGKDIDVVTYNTIISSLCKEGKFENAYDLLTEMEAKKLGP 666

Query: 534 DKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDE 570
           D+ TY +++  L   G + EAE    +M     V D+
Sbjct: 667 DQYTYKVIIAALTDAGRIKEAEEFTLKMVESGIVHDQ 703



 Score = 79.7 bits (195), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 62/222 (27%), Positives = 98/222 (44%), Gaps = 35/222 (15%)

Query: 353 QAGFKHDEHTYTTMV------GILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYG 406
           + G   DE TY  ++      G + +A QF       ++M+ +  +P+V T N L+    
Sbjct: 556 ENGLVPDETTYNIIIHGFCLEGNVEKAFQFH------NEMIENLFKPDVYTCNILLRGLC 609

Query: 407 RANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTF 466
           R   L +AL +F  +   G + D VTY T+I    K G  + A D+  +M+A  L PD +
Sbjct: 610 REGMLEKALKLFNTLVSKGKDIDVVTYNTIISSLCKEGKFENAYDLLTEMEAKKLGPDQY 669

Query: 467 TYSVIINCLGKAGHLQAAHQLFCEMVNQGCI--PNL---------------------VTY 503
           TY VII  L  AG ++ A +   +MV  G +   NL                     + Y
Sbjct: 670 TYKVIIAALTDAGRIKEAEEFTLKMVESGIVHDQNLKLGKGQNVLTSEVSEHFDFKSIAY 729

Query: 504 NIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVL 545
           +  I        Y+ A+ L+ ++   G   +K TY  +ME L
Sbjct: 730 SDQINELCNQHKYKDAMHLFVEVTKEGVALNKYTYLNLMEGL 771


>gi|9755886|emb|CAC01940.1| 67kD chloroplastic RNA-binding protein, P67.1 [Raphanus sativus]
          Length = 700

 Score =  153 bits (386), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 121/517 (23%), Positives = 238/517 (46%), Gaps = 37/517 (7%)

Query: 363 YTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQ 422
           Y   + +  +++      KL D+M++ G +P+  T+  LI    +      A++ F++M 
Sbjct: 176 YNVTMKVFRKSKDLEKSEKLFDEMLQRGVKPDNATFTTLISCARQCGLPKRAVEWFEKMP 235

Query: 423 VVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQ 482
             G EPD VT   +ID + +AG +++A+ +Y + +      D  T+S +I   G AG+  
Sbjct: 236 SFGLEPDNVTLAAMIDAYGRAGNVEMALSLYDRARTEKWRIDPVTFSTLIRIYGYAGNYD 295

Query: 483 AAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVM 542
               ++ EM + G  PNLV YN ++    KA+    A  +++D+ + GFEP+  TY+ ++
Sbjct: 296 GCLNIYEEMKSLGVKPNLVIYNRLLDSMGKAKRPWQATMIHKDLISNGFEPNWSTYAALI 355

Query: 543 EVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAG-L 601
              G   Y ++A  ++ +M+ K       +Y  L+ +    G V +A+E ++ M  +G  
Sbjct: 356 RAYGRARYGEDALVIYRQMKGKGLELTVILYNTLLSMCADIGYVDEAFEIFQDMKSSGTC 415

Query: 602 RPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGF 661
            P+  T +SL++ +   G++S+A   L+ M   G +P+L   T L+ C  +A+   D+  
Sbjct: 416 EPDSWTFSSLITVYSCCGRVSEAEAALREMREAGFEPTLFVLTSLIQCYGKAKQVDDVVR 475

Query: 662 CHE-LMAVSGHPAHMF---LLSMPSPGPDG---------QNVRDHVGSFLEMMHSED--- 705
             E ++ +   P   F   LL++ +  P           +  +  +G  ++M+  E+   
Sbjct: 476 TFEQVLELGIEPDDRFCGCLLNVMTQTPTEEIGKLIECVEKAKPKLGRVVKMLVEEENCE 535

Query: 706 ----RESKRGLVDAVVDFLHKSGLK------------EEAGSVWEVAAQKNVYPDAVKEK 749
               ++    L+D++   ++K+ L             E+A  + ++  + ++Y   ++ K
Sbjct: 536 EGVLKKEASELIDSIGSDVNKAYLNCLIDLCVNLNKLEKACEILQLGLEYDIY-SGLQSK 594

Query: 750 GMSYWLINLHVMSDGTAVIALSRTLAWFRKQMLISGVG-PSRIDIVTGWGRRSRVTGTSL 808
             + W ++L  +S G A+ AL   +    +  L SG   P  + I TG G+  + +   L
Sbjct: 595 SATQWSLHLKSLSLGAALTALHVWMNDLSEAALTSGEEFPPLLGINTGHGKH-KYSDKGL 653

Query: 809 VRQAVQELLHMFSFPFFTENGNSGCFVGCGEPLNKWL 845
                +  L   + PF       G F+        WL
Sbjct: 654 A-AVFESHLKELNAPFHEAPDKVGWFLTTSVAAKTWL 689



 Score =  103 bits (258), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 61/239 (25%), Positives = 122/239 (51%), Gaps = 2/239 (0%)

Query: 342 VALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRL 401
           +AL  ++  R +  ++ D  T++T++ I G A  +     + ++M   G +PN+V YNRL
Sbjct: 261 MALSLYDRARTEK-WRIDPVTFSTLIRIYGYAGNYDGCLNIYEEMKSLGVKPNLVIYNRL 319

Query: 402 IHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGL 461
           + S G+A    +A  + K +   G EP+  TY  LI  + +A + + A+ +Y++M+  GL
Sbjct: 320 LDSMGKAKRPWQATMIHKDLISNGFEPNWSTYAALIRAYGRARYGEDALVIYRQMKGKGL 379

Query: 462 SPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQG-CIPNLVTYNIMIALQAKARNYQSAL 520
                 Y+ +++     G++  A ++F +M + G C P+  T++ +I + +       A 
Sbjct: 380 ELTVILYNTLLSMCADIGYVDEAFEIFQDMKSSGTCEPDSWTFSSLITVYSCCGRVSEAE 439

Query: 521 KLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDL 579
              R+M+ AGFEP     + +++  G    +D+    F ++      PD+   G L+++
Sbjct: 440 AALREMREAGFEPTLFVLTSLIQCYGKAKQVDDVVRTFEQVLELGIEPDDRFCGCLLNV 498



 Score =  100 bits (248), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 73/277 (26%), Positives = 128/277 (46%), Gaps = 12/277 (4%)

Query: 392 QPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMD 451
           Q  VVT N + +       LN  L+  K  + V      + Y   + +  K+  L+ +  
Sbjct: 141 QDAVVTLNNMTNPETAPLVLNNLLETLKPTREV------ILYNVTMKVFRKSKDLEKSEK 194

Query: 452 MYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQA 511
           ++ +M   G+ PD  T++ +I+C  + G  + A + F +M + G  P+ VT   MI    
Sbjct: 195 LFDEMLQRGVKPDNATFTTLISCARQCGLPKRAVEWFEKMPSFGLEPDNVTLAAMIDAYG 254

Query: 512 KARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEP 571
           +A N + AL LY   +   +  D VT+S ++ + G+ G  D    ++ EM+     P+  
Sbjct: 255 RAGNVEMALSLYDRARTEKWRIDPVTFSTLIRIYGYAGNYDGCLNIYEEMKSLGVKPNLV 314

Query: 572 VYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGM 631
           +Y  L+D  GKA    +A   ++ ++  G  PN  T  +L+ A+ R     DA  + + M
Sbjct: 315 IYNRLLDSMGKAKRPWQATMIHKDLISNGFEPNWSTYAALIRAYGRARYGEDALVIYRQM 374

Query: 632 LNLGLKPSLQTYTLLLSCCTEARSPYDMGFCHELMAV 668
              GL+ ++  Y  LLS C       D+G+  E   +
Sbjct: 375 KGKGLELTVILYNTLLSMCA------DIGYVDEAFEI 405



 Score = 76.3 bits (186), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 42/171 (24%), Positives = 82/171 (47%)

Query: 500 LVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFA 559
           ++ YN+ + +  K+++ + + KL+ +M   G +PD  T++ ++     CG    A   F 
Sbjct: 173 VILYNVTMKVFRKSKDLEKSEKLFDEMLQRGVKPDNATFTTLISCARQCGLPKRAVEWFE 232

Query: 560 EMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVG 619
           +M      PD      ++D +G+AGNV  A   Y+       R +  T ++L+  +   G
Sbjct: 233 KMPSFGLEPDNVTLAAMIDAYGRAGNVEMALSLYDRARTEKWRIDPVTFSTLIRIYGYAG 292

Query: 620 QLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGFCHELMAVSG 670
                 ++ + M +LG+KP+L  Y  LL    +A+ P+     H+ +  +G
Sbjct: 293 NYDGCLNIYEEMKSLGVKPNLVIYNRLLDSMGKAKRPWQATMIHKDLISNG 343


>gi|224160015|ref|XP_002338159.1| predicted protein [Populus trichocarpa]
 gi|222871069|gb|EEF08200.1| predicted protein [Populus trichocarpa]
          Length = 368

 Score =  153 bits (386), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 98/306 (32%), Positives = 163/306 (53%), Gaps = 10/306 (3%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           G++ D HTYTT++  L +  +  A   L  +M   GCQP+VVTY+ +I S  +   +NEA
Sbjct: 5   GYQPDVHTYTTIINGLCKIGETVAAAGLFKKMGEAGCQPDVVTYSTIIDSLCKDRRVNEA 64

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
           LD+F  M+  G  P+  TY +LI           A  M  +M +  + P+  T+S++IN 
Sbjct: 65  LDIFSYMKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPNIVTFSLLINI 124

Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMI---ALQAKARNYQSALKLYRDMQNAGF 531
             K G++  A  +   M   G  PN+VTY+ ++   +LQA+      A KL+  M   G 
Sbjct: 125 FCKEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVF---EARKLFDVMITKGC 181

Query: 532 EPDKVTYSIVMEVLGHC--GYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKA 589
           +PD  +Y+I++   G+C    + EA+ +F EM  +   PD   Y  L+D   + G +R+A
Sbjct: 182 KPDVFSYNILIN--GYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRLREA 239

Query: 590 WEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSC 649
            + ++ ML  G  P++ T + LL  F + G L+ A+ L + M +  LKP++  Y +L+  
Sbjct: 240 HDLFKNMLTNGNLPDLCTYSILLDGFCKQGYLAKAFRLFRAMQSTYLKPNMVMYNILIDA 299

Query: 650 CTEARS 655
             ++R+
Sbjct: 300 MCKSRN 305



 Score =  151 bits (382), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 94/293 (32%), Positives = 153/293 (52%), Gaps = 16/293 (5%)

Query: 386 MVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGF 445
           MV  G QP+V TY  +I+   +      A  +FK+M   GC+PD VTY T+ID   K   
Sbjct: 1   MVARGYQPDVHTYTTIINGLCKIGETVAAAGLFKKMGEAGCQPDVVTYSTIIDSLCKDRR 60

Query: 446 LDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNI 505
           ++ A+D++  M+A G+SP+ FTY+ +I  L      + A  +  EM++   +PN+VT+++
Sbjct: 61  VNEALDIFSYMKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPNIVTFSL 120

Query: 506 MIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKN 565
           +I +  K  N   A  + + M   G EP+ VTYS +M        + EA  +F  M  K 
Sbjct: 121 LINIFCKEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVFEARKLFDVMITKG 180

Query: 566 WVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAY 625
             PD   Y +L++ + KA  + +A + +  M+  GL P++ + N+L+    ++G+L +A+
Sbjct: 181 CKPDVFSYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRLREAH 240

Query: 626 HLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGFCHELMAVSGHPAHMFLL 678
            L + ML  G  P L TY++LL            GFC +     G+ A  F L
Sbjct: 241 DLFKNMLTNGNLPDLCTYSILLD-----------GFCKQ-----GYLAKAFRL 277



 Score =  149 bits (376), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 93/313 (29%), Positives = 156/313 (49%), Gaps = 1/313 (0%)

Query: 334 LKQLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQP 393
           L ++ +   A G F  +  +AG + D  TY+T++  L + R+      +   M   G  P
Sbjct: 20  LCKIGETVAAAGLFKKMG-EAGCQPDVVTYSTIIDSLCKDRRVNEALDIFSYMKAKGISP 78

Query: 394 NVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMY 453
           N+ TYN LI      +   EA  +  +M  +   P+ VT+  LI+I  K G +  A  + 
Sbjct: 79  NIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPNIVTFSLLINIFCKEGNVFEARGVL 138

Query: 454 KKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKA 513
           K M   G+ P+  TYS ++N       +  A +LF  M+ +GC P++ +YNI+I    KA
Sbjct: 139 KTMTEMGVEPNVVTYSSLMNGYSLQAEVFEARKLFDVMITKGCKPDVFSYNILINGYCKA 198

Query: 514 RNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVY 573
           +    A +L+ +M + G  PD V+Y+ +++ L   G L EA  +F  M     +PD   Y
Sbjct: 199 KRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRLREAHDLFKNMLTNGNLPDLCTY 258

Query: 574 GLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLN 633
            +L+D + K G + KA+  + AM    L+PN+   N L+ A  +   L +A  L   +  
Sbjct: 259 SILLDGFCKQGYLAKAFRLFRAMQSTYLKPNMVMYNILIDAMCKSRNLKEARKLFSELFV 318

Query: 634 LGLKPSLQTYTLL 646
            GL+P+++ + L 
Sbjct: 319 QGLQPNMKHWKLF 331


>gi|125590524|gb|EAZ30874.1| hypothetical protein OsJ_14948 [Oryza sativa Japonica Group]
          Length = 414

 Score =  153 bits (386), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 101/365 (27%), Positives = 185/365 (50%), Gaps = 11/365 (3%)

Query: 325 MDAYQANQVLKQL----QDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAIN 380
           ++AY  N+++  L    + H V   F  W++ +  +  D  ++  ++  + R  Q     
Sbjct: 44  VEAYAYNKLMSSLIGRGRVHDVVALFERWIQDRV-YSPDVWSFNVVIKGVCRVGQVQKAL 102

Query: 381 KLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVG-CEPDRVTYCTLIDI 439
           +L+++M   GC P+ VT+N L+    R N ++   +V +++Q  G C P+ VT+ ++I  
Sbjct: 103 ELVERMNEFGCSPDTVTHNILVDGLCRTNEVSRGHEVLRRLQRDGVCMPNVVTFTSVISG 162

Query: 440 HAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPN 499
           + KAG L+ AM +Y  M A+G+ P+T TY+V+IN  GK G L +A +++ +M    C P+
Sbjct: 163 YCKAGKLEDAMAVYNDMVASGIMPNTVTYNVLINGYGKVGDLGSAVEVYQQMTRLRCPPD 222

Query: 500 LVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFA 559
           +VT++ +I    +      AL+++ DM     +P+  T+SI++  L      DEA  +  
Sbjct: 223 VVTFSSLIDGYCRCGQLDDALRIWSDMAQHRIQPNVYTFSIIIHSLCKQNRSDEAIGLLN 282

Query: 560 EMR-RKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRV 618
           E+  R +  P   +Y  ++D+  K G V +A    + M + G RP+  T   L+  +   
Sbjct: 283 ELNLRPDIAPQAFIYNPVIDVLCKCGKVDEANLIRKGMEEKGCRPDKYTYTILIIGYCMK 342

Query: 619 GQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGFCHELMAVSGHPAHMFLL 678
            ++S+A      M+  G  P   T    +SC  +A  P ++   H +   SG  +   + 
Sbjct: 343 SRISEAIMFFHEMVEAGCSPDSITVNCFISCLLKAGMPNEVD--HVMRLASGGASS--IQ 398

Query: 679 SMPSP 683
            +PSP
Sbjct: 399 EVPSP 403



 Score =  115 bits (287), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 84/357 (23%), Positives = 160/357 (44%), Gaps = 39/357 (10%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           G+  D    + +V     A    A   LL +    GC+     YN+L+ S      +++ 
Sbjct: 6   GYSPDARFLSFLVSSCTCANLLDASATLLSKASEFGCRVEAYAYNKLMSSLIGRGRVHDV 65

Query: 415 LDVFKQ-MQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIIN 473
           + +F++ +Q     PD  ++  +I    + G +  A+++ ++M   G SPDT T++++++
Sbjct: 66  VALFERWIQDRVYSPDVWSFNVVIKGVCRVGQVQKALELVERMNEFGCSPDTVTHNILVD 125

Query: 474 CLGKAGHLQAAHQLFCEMVNQG-CIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFE 532
            L +   +   H++   +   G C+PN+VT+  +I+   KA   + A+ +Y DM  +G  
Sbjct: 126 GLCRTNEVSRGHEVLRRLQRDGVCMPNVVTFTSVISGYCKAGKLEDAMAVYNDMVASGIM 185

Query: 533 PDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEW 592
           P+ VTY++++   G  G L  A  V+ +M R    PD   +  L+D + + G +  A   
Sbjct: 186 PNTVTYNVLINGYGKVGDLGSAVEVYQQMTRLRCPPDVVTFSSLIDGYCRCGQLDDALRI 245

Query: 593 YEAMLQAGLRPNVPT--------C----------------------------NSLLSAFL 616
           +  M Q  ++PNV T        C                            N ++    
Sbjct: 246 WSDMAQHRIQPNVYTFSIIIHSLCKQNRSDEAIGLLNELNLRPDIAPQAFIYNPVIDVLC 305

Query: 617 RVGQLSDAYHLLQGMLNLGLKPSLQTYT-LLLSCCTEARSPYDMGFCHELMAVSGHP 672
           + G++ +A  + +GM   G +P   TYT L++  C ++R    + F HE++     P
Sbjct: 306 KCGKVDEANLIRKGMEEKGCRPDKYTYTILIIGYCMKSRISEAIMFFHEMVEAGCSP 362



 Score =  112 bits (280), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 90/360 (25%), Positives = 165/360 (45%), Gaps = 42/360 (11%)

Query: 390 GCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLID-IHAKAGFLDV 448
           G  P+    + L+ S   AN L+ +  +  +    GC  +   Y  L+  +  +    DV
Sbjct: 6   GYSPDARFLSFLVSSCTCANLLDASATLLSKASEFGCRVEAYAYNKLMSSLIGRGRVHDV 65

Query: 449 AMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIA 508
                + +Q    SPD ++++V+I  + + G +Q A +L   M   GC P+ VT+NI++ 
Sbjct: 66  VALFERWIQDRVYSPDVWSFNVVIKGVCRVGQVQKALELVERMNEFGCSPDTVTHNILVD 125

Query: 509 LQAKARNYQSALKLYRDMQNAGF-EPDKVTYSIVMEVLGHC--GYLDEAEAVFAEMRRKN 565
              +        ++ R +Q  G   P+ VT++ V+   G+C  G L++A AV+ +M    
Sbjct: 126 GLCRTNEVSRGHEVLRRLQRDGVCMPNVVTFTSVIS--GYCKAGKLEDAMAVYNDMVASG 183

Query: 566 WVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAY 625
            +P+   Y +L++ +GK G++  A E Y+ M +    P+V T +SL+  + R GQL DA 
Sbjct: 184 IMPNTVTYNVLINGYGKVGDLGSAVEVYQQMTRLRCPPDVVTFSSLIDGYCRCGQLDDAL 243

Query: 626 HLLQGMLNLGLKPSLQTYTLLL-SCCTEARSPYDMGFCHELMAVSGHPAHMFLLSMPSPG 684
            +   M    ++P++ T+++++ S C + RS   +G  +EL                   
Sbjct: 244 RIWSDMAQHRIQPNVYTFSIIIHSLCKQNRSDEAIGLLNEL------------------- 284

Query: 685 PDGQNVRDHVGSFLEMMHSEDRESKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPD 744
               N+R             D   +  + + V+D L K G  +EA  + +   +K   PD
Sbjct: 285 ----NLR------------PDIAPQAFIYNPVIDVLCKCGKVDEANLIRKGMEEKGCRPD 328


>gi|15221282|ref|NP_172694.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|122242333|sp|Q0WKV3.1|PPR36_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g12300, mitochondrial; Flags: Precursor
 gi|110741411|dbj|BAF02254.1| hypothetical protein [Arabidopsis thaliana]
 gi|332190743|gb|AEE28864.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 637

 Score =  153 bits (386), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 91/311 (29%), Positives = 158/311 (50%), Gaps = 11/311 (3%)

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
           + G++ +  T++T++  L    +     +L+D+MV  G +P+++T N L++    +    
Sbjct: 151 KLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEA 210

Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
           EA+ +  +M   GC+P+ VTY  ++++  K+G   +AM++ +KM+   +  D   YS+II
Sbjct: 211 EAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIII 270

Query: 473 NCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFE 532
           + L K G L  A  LF EM  +G   N++TYNI+I     A  +    KL RDM      
Sbjct: 271 DGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKIN 330

Query: 533 PDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEW 592
           P+ VT+S++++     G L EAE +  EM  +   PD   Y  L+D + K  ++ KA + 
Sbjct: 331 PNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQM 390

Query: 593 YEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTE 652
            + M+  G  PN+ T N L++ + +  ++ D   L + M   G+     TY  L+     
Sbjct: 391 VDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQ---- 446

Query: 653 ARSPYDMGFCH 663
                  GFC 
Sbjct: 447 -------GFCE 450



 Score =  144 bits (362), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 84/295 (28%), Positives = 148/295 (50%)

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
           +   K D   Y+ ++  L +         L ++M   G   N++TYN LI  +  A   +
Sbjct: 256 ERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWD 315

Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
           +   + + M      P+ VT+  LID   K G L  A +++K+M   G++PDT TY+ +I
Sbjct: 316 DGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLI 375

Query: 473 NCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFE 532
           +   K  HL  A+Q+   MV++GC PN+ T+NI+I    KA      L+L+R M   G  
Sbjct: 376 DGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVV 435

Query: 533 PDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEW 592
            D VTY+ +++     G L+ A+ +F EM  +   P+   Y +L+D     G   KA E 
Sbjct: 436 ADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEI 495

Query: 593 YEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
           +E + ++ +  ++   N ++       ++ DA+ L   +   G+KP ++TY +++
Sbjct: 496 FEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMI 550



 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 94/329 (28%), Positives = 163/329 (49%), Gaps = 4/329 (1%)

Query: 322 NYSMDAYQANQVLKQLQDHTV---ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGA 378
           N  +DA + + ++  L  H     A   FN +  + G   +  TY  ++G    A ++  
Sbjct: 258 NIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMK-GITTNIITYNILIGGFCNAGRWDD 316

Query: 379 INKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLID 438
             KLL  M++    PNVVT++ LI S+ +   L EA ++ K+M   G  PD +TY +LID
Sbjct: 317 GAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLID 376

Query: 439 IHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIP 498
              K   LD A  M   M + G  P+  T++++IN   KA  +    +LF +M  +G + 
Sbjct: 377 GFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVA 436

Query: 499 NLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVF 558
           + VTYN +I    +      A +L+++M +    P+ VTY I+++ L   G  ++A  +F
Sbjct: 437 DTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIF 496

Query: 559 AEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRV 618
            ++ +     D  +Y +++     A  V  AW+ + ++   G++P V T N ++    + 
Sbjct: 497 EKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKK 556

Query: 619 GQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
           G LS+A  L + M   G  P   TY +L+
Sbjct: 557 GPLSEAELLFRKMEEDGHAPDGWTYNILI 585



 Score =  139 bits (351), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 81/295 (27%), Positives = 155/295 (52%)

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
           + G K D  T  T+V  L  + +      L+D+MV  GCQPN VTY  +++   ++    
Sbjct: 186 EMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTA 245

Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
            A+++ ++M+    + D V Y  +ID   K G LD A +++ +M+  G++ +  TY+++I
Sbjct: 246 LAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILI 305

Query: 473 NCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFE 532
                AG      +L  +M+ +   PN+VT++++I    K    + A +L+++M + G  
Sbjct: 306 GGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIA 365

Query: 533 PDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEW 592
           PD +TY+ +++      +LD+A  +   M  K   P+   + +L++ + KA  +    E 
Sbjct: 366 PDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLEL 425

Query: 593 YEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
           +  M   G+  +  T N+L+  F  +G+L+ A  L Q M++  + P++ TY +LL
Sbjct: 426 FRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILL 480



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 84/302 (27%), Positives = 146/302 (48%), Gaps = 11/302 (3%)

Query: 363 YTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQ 422
           ++ +   + + +Q+  +  L  QM   G   N+ T + +I+ + R   L  A     ++ 
Sbjct: 91  FSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMINCFCRCRKLCLAFSAMGKII 150

Query: 423 VVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQ 482
            +G EP+ +T+ TLI+     G +  A+++  +M   G  PD  T + ++N L  +G   
Sbjct: 151 KLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEA 210

Query: 483 AAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVM 542
            A  L  +MV  GC PN VTY  ++ +  K+     A++L R M+    + D V YSI++
Sbjct: 211 EAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIII 270

Query: 543 EVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLR 602
           + L   G LD A  +F EM  K    +   Y +L+  +  AG      +    M++  + 
Sbjct: 271 DGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKIN 330

Query: 603 PNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGFC 662
           PNV T + L+ +F++ G+L +A  L + M++ G+ P   TYT L+            GFC
Sbjct: 331 PNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLID-----------GFC 379

Query: 663 HE 664
            E
Sbjct: 380 KE 381



 Score =  124 bits (310), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 75/271 (27%), Positives = 137/271 (50%), Gaps = 1/271 (0%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           G   D  TYT+++    +       N+++D MV  GC PN+ T+N LI+ Y +AN +++ 
Sbjct: 363 GIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDG 422

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
           L++F++M + G   D VTY TLI    + G L+VA +++++M +  + P+  TY ++++ 
Sbjct: 423 LELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDG 482

Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPD 534
           L   G  + A ++F ++       ++  YNI+I     A     A  L+  +   G +P 
Sbjct: 483 LCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPG 542

Query: 535 KVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYE 594
             TY+I++  L   G L EAE +F +M      PD   Y +L+      G+  K+ +  E
Sbjct: 543 VKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIE 602

Query: 595 AMLQAGLRPNVPTCNSLLSAFLRVGQLSDAY 625
            + + G   +  T   ++   L  G+L  ++
Sbjct: 603 ELKRCGFSVDASTIKMVID-MLSDGRLKKSF 632



 Score = 65.1 bits (157), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 52/212 (24%), Positives = 92/212 (43%), Gaps = 5/212 (2%)

Query: 436 LIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQG 495
           L+DI A     D A+D+++ M  +   P    +S + + + K         L  +M  +G
Sbjct: 64  LVDIKA-----DDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKG 118

Query: 496 CIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAE 555
              NL T +IMI    + R    A      +   G+EP+ +T+S ++  L   G + EA 
Sbjct: 119 IAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEAL 178

Query: 556 AVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAF 615
            +   M      PD      LV+    +G   +A    + M++ G +PN  T   +L+  
Sbjct: 179 ELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVM 238

Query: 616 LRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
            + GQ + A  LL+ M    +K     Y++++
Sbjct: 239 CKSGQTALAMELLRKMEERNIKLDAVKYSIII 270



 Score = 50.1 bits (118), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 34/142 (23%), Positives = 72/142 (50%)

Query: 381 KLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIH 440
           ++ +++ +   + ++  YN +IH    A+ +++A D+F  + + G +P   TY  +I   
Sbjct: 494 EIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGL 553

Query: 441 AKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNL 500
            K G L  A  +++KM+  G +PD +TY+++I      G    + +L  E+   G   + 
Sbjct: 554 CKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELKRCGFSVDA 613

Query: 501 VTYNIMIALQAKARNYQSALKL 522
            T  ++I + +  R  +S L +
Sbjct: 614 STIKMVIDMLSDGRLKKSFLDM 635



 Score = 46.6 bits (109), Expect = 0.064,   Method: Compositional matrix adjust.
 Identities = 32/157 (20%), Positives = 69/157 (43%), Gaps = 1/157 (0%)

Query: 517 QSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLL 576
             A+ L+RDM ++   P  + +S +   +      D   A+  +M  K    +     ++
Sbjct: 70  DDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIM 129

Query: 577 VDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGL 636
           ++ + +   +  A+     +++ G  PN  T ++L++     G++S+A  L+  M+ +G 
Sbjct: 130 INCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGH 189

Query: 637 KPSLQTY-TLLLSCCTEARSPYDMGFCHELMAVSGHP 672
           KP L T  TL+   C   +    M    +++     P
Sbjct: 190 KPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQP 226


>gi|115455503|ref|NP_001051352.1| Os03g0761300 [Oryza sativa Japonica Group]
 gi|14488357|gb|AAK63924.1|AC084282_5 unknown protein [Oryza sativa Japonica Group]
 gi|108711214|gb|ABF99009.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
 gi|113549823|dbj|BAF13266.1| Os03g0761300 [Oryza sativa Japonica Group]
 gi|125545804|gb|EAY91943.1| hypothetical protein OsI_13630 [Oryza sativa Indica Group]
 gi|125588003|gb|EAZ28667.1| hypothetical protein OsJ_12678 [Oryza sativa Japonica Group]
          Length = 484

 Score =  153 bits (386), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 96/326 (29%), Positives = 170/326 (52%), Gaps = 6/326 (1%)

Query: 330 ANQVLKQLQDH-TVALGFFNWLRRQ--AGFKHDEHTYTTMVGILGRARQFGAINKLLDQM 386
           A +VL++L +   +A  FF W RRQ   G  H   +Y T+V  L + RQ+  +  ++  M
Sbjct: 68  AERVLERLDNAGMLAYRFFEWARRQKRGGCAHTVRSYHTVVASLAKIRQYQLMWDVVAVM 127

Query: 387 VRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFL 446
            R+G   NV T+  ++  Y RA  ++EA+  F  M+  G  P+   + +L+    K+  +
Sbjct: 128 RREGA-VNVETFGIIMRKYARAQKVDEAVYTFNVMEKYGVVPNLAAFNSLLGALCKSKNV 186

Query: 447 DVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIM 506
             A +++ KM +   SPD  TYS+++   G+A +L    +++ EM++ GC P++VTY IM
Sbjct: 187 RKAQEIFDKMNSR-FSPDAKTYSILLEGWGRAPNLPKMREVYSEMLDAGCEPDIVTYGIM 245

Query: 507 IALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNW 566
           +    K    + A+++ +DM + G +P    YS+++   G    +++A A F +M +   
Sbjct: 246 VDSLCKTGRVEEAVRVVQDMTSRGCQPTTYIYSVLVHTYGVEMRIEDAVATFLDMEKDGI 305

Query: 567 VPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYH 626
           VPD  VY  LV  + KA     A+     M   G+  N  T N +L+  + +G+  +AY 
Sbjct: 306 VPDIVVYNALVSAFCKAKKFENAFRVLNDMEGHGITTNSRTWNIILNHLISLGRDDEAYK 365

Query: 627 LLQGMLNLGLKPSLQTYTLLLSCCTE 652
           + + M+    +P   TYT+++    E
Sbjct: 366 VFRRMIKC-CQPDCDTYTMMIKMFCE 390



 Score =  132 bits (332), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 76/281 (27%), Positives = 148/281 (52%), Gaps = 2/281 (0%)

Query: 363 YTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQ 422
           + +++G L +++      ++ D+M      P+  TY+ L+  +GRA  L +  +V+ +M 
Sbjct: 173 FNSLLGALCKSKNVRKAQEIFDKM-NSRFSPDAKTYSILLEGWGRAPNLPKMREVYSEML 231

Query: 423 VVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQ 482
             GCEPD VTY  ++D   K G ++ A+ + + M + G  P T+ YSV+++  G    ++
Sbjct: 232 DAGCEPDIVTYGIMVDSLCKTGRVEEAVRVVQDMTSRGCQPTTYIYSVLVHTYGVEMRIE 291

Query: 483 AAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVM 542
            A   F +M   G +P++V YN +++   KA+ +++A ++  DM+  G   +  T++I++
Sbjct: 292 DAVATFLDMEKDGIVPDIVVYNALVSAFCKAKKFENAFRVLNDMEGHGITTNSRTWNIIL 351

Query: 543 EVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLR 602
             L   G  DEA  VF  M  K   PD   Y +++ ++ +   V  A + ++ M      
Sbjct: 352 NHLISLGRDDEAYKVFRRM-IKCCQPDCDTYTMMIKMFCENDKVEMALKVWKYMRLKQFL 410

Query: 603 PNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTY 643
           P++ T + L++      ++S A  LL+ M+  G++P   T+
Sbjct: 411 PSMHTFSVLINGLCDKREVSQACVLLEDMIEKGIRPPGSTF 451



 Score =  108 bits (269), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 69/285 (24%), Positives = 134/285 (47%), Gaps = 2/285 (0%)

Query: 356 FKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEAL 415
           F  D  TY+ ++   GRA     + ++  +M+  GC+P++VTY  ++ S  +   + EA+
Sbjct: 200 FSPDAKTYSILLEGWGRAPNLPKMREVYSEMLDAGCEPDIVTYGIMVDSLCKTGRVEEAV 259

Query: 416 DVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCL 475
            V + M   GC+P    Y  L+  +     ++ A+  +  M+  G+ PD   Y+ +++  
Sbjct: 260 RVVQDMTSRGCQPTTYIYSVLVHTYGVEMRIEDAVATFLDMEKDGIVPDIVVYNALVSAF 319

Query: 476 GKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDK 535
            KA   + A ++  +M   G   N  T+NI++           A K++R M     +PD 
Sbjct: 320 CKAKKFENAFRVLNDMEGHGITTNSRTWNIILNHLISLGRDDEAYKVFRRMIKCC-QPDC 378

Query: 536 VTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEA 595
            TY++++++      ++ A  V+  MR K ++P    + +L++       V +A    E 
Sbjct: 379 DTYTMMIKMFCENDKVEMALKVWKYMRLKQFLPSMHTFSVLINGLCDKREVSQACVLLED 438

Query: 596 MLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSL 640
           M++ G+RP   T   L    L+ G+  D    L   +N+ ++  L
Sbjct: 439 MIEKGIRPPGSTFGKLRQLLLKEGR-KDVLDFLVEKMNILIQEPL 482



 Score = 97.1 bits (240), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 64/231 (27%), Positives = 112/231 (48%), Gaps = 1/231 (0%)

Query: 354 AGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNE 413
           AG + D  TY  MV  L +  +     +++  M   GCQP    Y+ L+H+YG    + +
Sbjct: 233 AGCEPDIVTYGIMVDSLCKTGRVEEAVRVVQDMTSRGCQPTTYIYSVLVHTYGVEMRIED 292

Query: 414 ALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIIN 473
           A+  F  M+  G  PD V Y  L+    KA   + A  +   M+  G++ ++ T+++I+N
Sbjct: 293 AVATFLDMEKDGIVPDIVVYNALVSAFCKAKKFENAFRVLNDMEGHGITTNSRTWNIILN 352

Query: 474 CLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEP 533
            L   G    A+++F  M+ + C P+  TY +MI +  +    + ALK+++ M+   F P
Sbjct: 353 HLISLGRDDEAYKVFRRMI-KCCQPDCDTYTMMIKMFCENDKVEMALKVWKYMRLKQFLP 411

Query: 534 DKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAG 584
              T+S+++  L     + +A  +  +M  K   P    +G L  L  K G
Sbjct: 412 SMHTFSVLINGLCDKREVSQACVLLEDMIEKGIRPPGSTFGKLRQLLLKEG 462



 Score = 84.0 bits (206), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 61/231 (26%), Positives = 105/231 (45%), Gaps = 2/231 (0%)

Query: 425 GCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAA 484
           GC     +Y T++   AK     +  D+   M+  G + +  T+ +I+    +A  +  A
Sbjct: 96  GCAHTVRSYHTVVASLAKIRQYQLMWDVVAVMRREG-AVNVETFGIIMRKYARAQKVDEA 154

Query: 485 HQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEV 544
              F  M   G +PNL  +N ++    K++N + A +++ D  N+ F PD  TYSI++E 
Sbjct: 155 VYTFNVMEKYGVVPNLAAFNSLLGALCKSKNVRKAQEIF-DKMNSRFSPDAKTYSILLEG 213

Query: 545 LGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPN 604
            G    L +   V++EM      PD   YG++VD   K G V +A    + M   G +P 
Sbjct: 214 WGRAPNLPKMREVYSEMLDAGCEPDIVTYGIMVDSLCKTGRVEEAVRVVQDMTSRGCQPT 273

Query: 605 VPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARS 655
               + L+  +    ++ DA      M   G+ P +  Y  L+S   +A+ 
Sbjct: 274 TYIYSVLVHTYGVEMRIEDAVATFLDMEKDGIVPDIVVYNALVSAFCKAKK 324


>gi|357113916|ref|XP_003558747.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g01110-like [Brachypodium distachyon]
          Length = 651

 Score =  152 bits (385), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 118/436 (27%), Positives = 199/436 (45%), Gaps = 18/436 (4%)

Query: 359 DEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVF 418
           D  T+  MV    RA    A   L+D MV  G +P +VTYN ++    R    ++A +VF
Sbjct: 193 DVVTHNVMVDARFRAGDVEAAMALIDSMVSKGIKPGLVTYNSVLKGLLRNGRWDKAREVF 252

Query: 419 KQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKA 478
           + M   G  PD  ++  LI    +AG L+ A+  YK+M+   ++PD  ++S +I    + 
Sbjct: 253 RAMDACGVAPDVRSFNMLIGGFCRAGELEEALRFYKEMRGRRVTPDVVSFSCLIGLFTRR 312

Query: 479 GHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTY 538
           G +  A +   EM   G +P+ V Y ++I    +A     AL++  +M   G  PD VTY
Sbjct: 313 GEMDHAAEYLREMREFGLMPDGVIYTMVIGGFCRAGLMLEALRVRDEMVAFGCLPDVVTY 372

Query: 539 SIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQ 598
           + ++  L     L +AE +  EM+ +   PD   +  L+  + + GN+ KA ++++ +  
Sbjct: 373 NTLLNGLCKERRLSDAEELLNEMKERGVPPDLCTFTTLIHGYCRDGNIEKALQFFDTISD 432

Query: 599 AGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL-SCCTEARSPY 657
             LRP++ T N+L+    R G L  A  L   M +  + P+  TY++L+ S C + +   
Sbjct: 433 QRLRPDIVTYNTLIDGMCRQGDLGKANELWDDMHSREIFPNHVTYSILIDSHCEKGQVDN 492

Query: 658 DMGFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSE---DRESKRGLVD 714
              F  E++     P  M   S+        NV        +M H +   D  +   L+ 
Sbjct: 493 AFAFLDEMVNKGIVPNIMTYNSIIKGYCRSGNVSKGQQFLPKMRHDKVMPDLITYNTLIH 552

Query: 715 AVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAVKEKGMSYWLINLHVMSDGTAVIALSRTL 774
             V    K G   EA ++ ++   +NV PDAV            +++  G +V    +  
Sbjct: 553 GYV----KEGKMHEAFNLLKIMENENVQPDAV----------TYNMIISGFSVHGNMQEA 598

Query: 775 AWFRKQMLISGVGPSR 790
            W  K+M   G+ P R
Sbjct: 599 DWVYKKMGARGIEPDR 614



 Score =  150 bits (379), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 91/308 (29%), Positives = 165/308 (53%), Gaps = 5/308 (1%)

Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLI 402
           AL F+  +R +     D  +++ ++G+  R  +     + L +M   G  P+ V Y  +I
Sbjct: 283 ALRFYKEMRGRR-VTPDVVSFSCLIGLFTRRGEMDHAAEYLREMREFGLMPDGVIYTMVI 341

Query: 403 HSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLS 462
             + RA  + EAL V  +M   GC PD VTY TL++   K   L  A ++  +M+  G+ 
Sbjct: 342 GGFCRAGLMLEALRVRDEMVAFGCLPDVVTYNTLLNGLCKERRLSDAEELLNEMKERGVP 401

Query: 463 PDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKL 522
           PD  T++ +I+   + G+++ A Q F  + +Q   P++VTYN +I    +  +   A +L
Sbjct: 402 PDLCTFTTLIHGYCRDGNIEKALQFFDTISDQRLRPDIVTYNTLIDGMCRQGDLGKANEL 461

Query: 523 YRDMQNAGFEPDKVTYSIVMEVLGHC--GYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLW 580
           + DM +    P+ VTYSI+++   HC  G +D A A   EM  K  VP+   Y  ++  +
Sbjct: 462 WDDMHSREIFPNHVTYSILID--SHCEKGQVDNAFAFLDEMVNKGIVPNIMTYNSIIKGY 519

Query: 581 GKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSL 640
            ++GNV K  ++   M    + P++ T N+L+  +++ G++ +A++LL+ M N  ++P  
Sbjct: 520 CRSGNVSKGQQFLPKMRHDKVMPDLITYNTLIHGYVKEGKMHEAFNLLKIMENENVQPDA 579

Query: 641 QTYTLLLS 648
            TY +++S
Sbjct: 580 VTYNMIIS 587



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 82/302 (27%), Positives = 154/302 (50%), Gaps = 2/302 (0%)

Query: 349 WLR--RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYG 406
           +LR  R+ G   D   YT ++G   RA       ++ D+MV  GC P+VVTYN L++   
Sbjct: 321 YLREMREFGLMPDGVIYTMVIGGFCRAGLMLEALRVRDEMVAFGCLPDVVTYNTLLNGLC 380

Query: 407 RANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTF 466
           +   L++A ++  +M+  G  PD  T+ TLI  + + G ++ A+  +  +    L PD  
Sbjct: 381 KERRLSDAEELLNEMKERGVPPDLCTFTTLIHGYCRDGNIEKALQFFDTISDQRLRPDIV 440

Query: 467 TYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDM 526
           TY+ +I+ + + G L  A++L+ +M ++   PN VTY+I+I    +     +A     +M
Sbjct: 441 TYNTLIDGMCRQGDLGKANELWDDMHSREIFPNHVTYSILIDSHCEKGQVDNAFAFLDEM 500

Query: 527 QNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNV 586
            N G  P+ +TY+ +++     G + + +    +MR    +PD   Y  L+  + K G +
Sbjct: 501 VNKGIVPNIMTYNSIIKGYCRSGNVSKGQQFLPKMRHDKVMPDLITYNTLIHGYVKEGKM 560

Query: 587 RKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLL 646
            +A+   + M    ++P+  T N ++S F   G + +A  + + M   G++P   TY  +
Sbjct: 561 HEAFNLLKIMENENVQPDAVTYNMIISGFSVHGNMQEADWVYKKMGARGIEPDRYTYMSM 620

Query: 647 LS 648
           ++
Sbjct: 621 IN 622



 Score =  135 bits (340), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 81/280 (28%), Positives = 139/280 (49%)

Query: 359 DEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVF 418
           D  TY T++  L + R+     +LL++M   G  P++ T+  LIH Y R   + +AL  F
Sbjct: 368 DVVTYNTLLNGLCKERRLSDAEELLNEMKERGVPPDLCTFTTLIHGYCRDGNIEKALQFF 427

Query: 419 KQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKA 478
             +      PD VTY TLID   + G L  A +++  M +  + P+  TYS++I+   + 
Sbjct: 428 DTISDQRLRPDIVTYNTLIDGMCRQGDLGKANELWDDMHSREIFPNHVTYSILIDSHCEK 487

Query: 479 GHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTY 538
           G +  A     EMVN+G +PN++TYN +I    ++ N     +    M++    PD +TY
Sbjct: 488 GQVDNAFAFLDEMVNKGIVPNIMTYNSIIKGYCRSGNVSKGQQFLPKMRHDKVMPDLITY 547

Query: 539 SIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQ 598
           + ++      G + EA  +   M  +N  PD   Y +++  +   GN+++A   Y+ M  
Sbjct: 548 NTLIHGYVKEGKMHEAFNLLKIMENENVQPDAVTYNMIISGFSVHGNMQEADWVYKKMGA 607

Query: 599 AGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKP 638
            G+ P+  T  S+++  +  G    ++ L   ML  GL P
Sbjct: 608 RGIEPDRYTYMSMINGHVVAGNSKKSFQLHDEMLQKGLAP 647



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 74/254 (29%), Positives = 131/254 (51%)

Query: 394 NVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMY 453
           N  T N ++HSY +     E   V  +M+     PD VT+  ++D   +AG ++ AM + 
Sbjct: 158 NTYTLNIMVHSYCKTLQFGEVDTVISEMEKRCVFPDVVTHNVMVDARFRAGDVEAAMALI 217

Query: 454 KKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKA 513
             M + G+ P   TY+ ++  L + G    A ++F  M   G  P++ ++N++I    +A
Sbjct: 218 DSMVSKGIKPGLVTYNSVLKGLLRNGRWDKAREVFRAMDACGVAPDVRSFNMLIGGFCRA 277

Query: 514 RNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVY 573
              + AL+ Y++M+     PD V++S ++ +    G +D A     EMR    +PD  +Y
Sbjct: 278 GELEEALRFYKEMRGRRVTPDVVSFSCLIGLFTRRGEMDHAAEYLREMREFGLMPDGVIY 337

Query: 574 GLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLN 633
            +++  + +AG + +A    + M+  G  P+V T N+LL+   +  +LSDA  LL  M  
Sbjct: 338 TMVIGGFCRAGLMLEALRVRDEMVAFGCLPDVVTYNTLLNGLCKERRLSDAEELLNEMKE 397

Query: 634 LGLKPSLQTYTLLL 647
            G+ P L T+T L+
Sbjct: 398 RGVPPDLCTFTTLI 411



 Score =  128 bits (321), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 78/259 (30%), Positives = 133/259 (51%), Gaps = 12/259 (4%)

Query: 352 RQAGFKHDEHTYTTMV------GILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSY 405
           ++ G   D  T+TT++      G + +A QF   + + DQ +R    P++VTYN LI   
Sbjct: 396 KERGVPPDLCTFTTLIHGYCRDGNIEKALQF--FDTISDQRLR----PDIVTYNTLIDGM 449

Query: 406 GRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDT 465
            R   L +A +++  M      P+ VTY  LID H + G +D A     +M   G+ P+ 
Sbjct: 450 CRQGDLGKANELWDDMHSREIFPNHVTYSILIDSHCEKGQVDNAFAFLDEMVNKGIVPNI 509

Query: 466 FTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRD 525
            TY+ II    ++G++    Q   +M +   +P+L+TYN +I    K      A  L + 
Sbjct: 510 MTYNSIIKGYCRSGNVSKGQQFLPKMRHDKVMPDLITYNTLIHGYVKEGKMHEAFNLLKI 569

Query: 526 MQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGN 585
           M+N   +PD VTY++++      G + EA+ V+ +M  +   PD   Y  +++    AGN
Sbjct: 570 MENENVQPDAVTYNMIISGFSVHGNMQEADWVYKKMGARGIEPDRYTYMSMINGHVVAGN 629

Query: 586 VRKAWEWYEAMLQAGLRPN 604
            +K+++ ++ MLQ GL P+
Sbjct: 630 SKKSFQLHDEMLQKGLAPD 648



 Score =  101 bits (251), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 67/292 (22%), Positives = 131/292 (44%)

Query: 455 KMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKAR 514
           +M+   + PD  T++V+++   +AG ++AA  L   MV++G  P LVTYN ++    +  
Sbjct: 184 EMEKRCVFPDVVTHNVMVDARFRAGDVEAAMALIDSMVSKGIKPGLVTYNSVLKGLLRNG 243

Query: 515 NYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYG 574
            +  A +++R M   G  PD  ++++++      G L+EA   + EMR +   PD   + 
Sbjct: 244 RWDKAREVFRAMDACGVAPDVRSFNMLIGGFCRAGELEEALRFYKEMRGRRVTPDVVSFS 303

Query: 575 LLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNL 634
            L+ L+ + G +  A E+   M + GL P+      ++  F R G + +A  +   M+  
Sbjct: 304 CLIGLFTRRGEMDHAAEYLREMREFGLMPDGVIYTMVIGGFCRAGLMLEALRVRDEMVAF 363

Query: 635 GLKPSLQTYTLLLSCCTEARSPYDMGFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHV 694
           G  P + TY  LL+   + R   D       M   G P  +   +    G       +  
Sbjct: 364 GCLPDVVTYNTLLNGLCKERRLSDAEELLNEMKERGVPPDLCTFTTLIHGYCRDGNIEKA 423

Query: 695 GSFLEMMHSEDRESKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAV 746
             F + +  +         + ++D + + G   +A  +W+    + ++P+ V
Sbjct: 424 LQFFDTISDQRLRPDIVTYNTLIDGMCRQGDLGKANELWDDMHSREIFPNHV 475


>gi|297817834|ref|XP_002876800.1| hypothetical protein ARALYDRAFT_484139 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297322638|gb|EFH53059.1| hypothetical protein ARALYDRAFT_484139 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 1010

 Score =  152 bits (385), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 101/359 (28%), Positives = 171/359 (47%), Gaps = 1/359 (0%)

Query: 387 VRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFL 446
            R+ C P    ++ L         + EA+  F +M+     P   +   L+   AK G  
Sbjct: 17  TRNVCVPGFGVFDALFSVLIDLGMVEEAIQCFSKMKRFRVFPKTRSCNGLLHKFAKLGKT 76

Query: 447 DVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIM 506
           D     +K M  AG  P  FTY+++I+C+ K G ++AA  LF EM  +G IP+ VTYN M
Sbjct: 77  DGVKRFFKDMIGAGAKPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLIPDTVTYNSM 136

Query: 507 IALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNW 566
           I    K       +  + +M++   EPD +TY+ ++      G L +    F EM+R   
Sbjct: 137 IDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPKGLEFFREMKRNGL 196

Query: 567 VPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYH 626
            P+   Y  LVD + K G +++A ++Y  M + GL PN  T  SL+ A+ ++G LSDA+ 
Sbjct: 197 KPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDAYCKIGNLSDAFR 256

Query: 627 LLQGMLNLGLKPSLQTYTLLLSCCTEARSPYD-MGFCHELMAVSGHPAHMFLLSMPSPGP 685
           L   ML +G++ ++ TYT L+       +P + +    E++ +      +    +     
Sbjct: 257 LANEMLQVGVEWNVVTYTALIDGLCGWENPTEGLHLLDEMVELDIKVTVVTFCVLIDGLC 316

Query: 686 DGQNVRDHVGSFLEMMHSEDRESKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPD 744
             + V   +  F  + +    ++   +  A++D L K    E A +++E  AQK + PD
Sbjct: 317 KNKLVSKAIDYFGRISNDFGLQANAAIYTAMIDGLCKGNQVEAATTLFEQMAQKGLVPD 375



 Score =  137 bits (346), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 99/371 (26%), Positives = 163/371 (43%), Gaps = 51/371 (13%)

Query: 354 AGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNE 413
           AG K    TY  M+  + +     A   L ++M   G  P+ VTYN +I  +G+   L++
Sbjct: 89  AGAKPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLIPDTVTYNSMIDGFGKVGRLDD 148

Query: 414 ALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIIN 473
            +  F++M+ + CEPD +TY  LI+   K G L   ++ +++M+  GL P+  +YS +++
Sbjct: 149 TVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPKGLEFFREMKRNGLKPNVVSYSTLVD 208

Query: 474 CLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEP 533
              K G +Q A + + +M   G +PN  TY  +I    K  N   A +L  +M   G E 
Sbjct: 209 AFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDAYCKIGNLSDAFRLANEMLQVGVEW 268

Query: 534 DKVTYSIVMEVLGHCGYLDEAEAV-----FAEMRRKNWV--------------------- 567
           + VTY+ +++  G CG+ +  E +       E+  K  V                     
Sbjct: 269 NVVTYTALID--GLCGWENPTEGLHLLDEMVELDIKVTVVTFCVLIDGLCKNKLVSKAID 326

Query: 568 ------------PDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAF 615
                        +  +Y  ++D   K   V  A   +E M Q GL P+     SL+   
Sbjct: 327 YFGRISNDFGLQANAAIYTAMIDGLCKGNQVEAATTLFEQMAQKGLVPDRTAYTSLMDGN 386

Query: 616 LRVGQLSDAYHLLQGMLNLGLKPSLQTYTLL---LSCCTE---ARSPYDMGFCHELMAVS 669
            + G + +A  L   M+  G+K  L  YT L   LS C +   ARS     F  E++   
Sbjct: 387 FKQGNVLEALALRDKMVETGMKLDLLAYTSLVWGLSHCNQLQKARS-----FLEEMIGEG 441

Query: 670 GHPAHMFLLSM 680
            HP  +  +S+
Sbjct: 442 IHPDEVLCISV 452



 Score = 95.1 bits (235), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 71/278 (25%), Positives = 130/278 (46%), Gaps = 8/278 (2%)

Query: 325 MDAYQANQVLKQLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLD 384
           +DA+    +++Q      A+ F+  +RR  G   +E+TYT+++    +        +L +
Sbjct: 207 VDAFCKEGMMQQ------AIKFYVDMRR-VGLVPNEYTYTSLIDAYCKIGNLSDAFRLAN 259

Query: 385 QMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAG 444
           +M++ G + NVVTY  LI          E L +  +M  +  +   VT+C LID   K  
Sbjct: 260 EMLQVGVEWNVVTYTALIDGLCGWENPTEGLHLLDEMVELDIKVTVVTFCVLIDGLCKNK 319

Query: 445 FLDVAMDMYKKM-QAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTY 503
            +  A+D + ++    GL  +   Y+ +I+ L K   ++AA  LF +M  +G +P+   Y
Sbjct: 320 LVSKAIDYFGRISNDFGLQANAAIYTAMIDGLCKGNQVEAATTLFEQMAQKGLVPDRTAY 379

Query: 504 NIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRR 563
             ++    K  N   AL L   M   G + D + Y+ ++  L HC  L +A +   EM  
Sbjct: 380 TSLMDGNFKQGNVLEALALRDKMVETGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIG 439

Query: 564 KNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGL 601
           +   PDE +   ++    + G + +A E    +++  L
Sbjct: 440 EGIHPDEVLCISVLKKHYELGCINEAVELQSYLMKHQL 477



 Score = 88.6 bits (218), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 78/288 (27%), Positives = 122/288 (42%), Gaps = 6/288 (2%)

Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLI 402
            L FF  ++R  G K +  +Y+T+V    +        K    M R G  PN  TY  LI
Sbjct: 184 GLEFFREMKRN-GLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLI 242

Query: 403 HSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLS 462
            +Y +   L++A  +  +M  VG E + VTY  LID           + +  +M    + 
Sbjct: 243 DAYCKIGNLSDAFRLANEMLQVGVEWNVVTYTALIDGLCGWENPTEGLHLLDEMVELDIK 302

Query: 463 PDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQ-GCIPNLVTYNIMIALQAKARNYQSALK 521
               T+ V+I+ L K   +  A   F  + N  G   N   Y  MI    K    ++A  
Sbjct: 303 VTVVTFCVLIDGLCKNKLVSKAIDYFGRISNDFGLQANAAIYTAMIDGLCKGNQVEAATT 362

Query: 522 LYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWG 581
           L+  M   G  PD+  Y+ +M+     G + EA A+  +M       D   Y  LV  WG
Sbjct: 363 LFEQMAQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMVETGMKLDLLAYTSLV--WG 420

Query: 582 --KAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHL 627
                 ++KA  + E M+  G+ P+   C S+L     +G +++A  L
Sbjct: 421 LSHCNQLQKARSFLEEMIGEGIHPDEVLCISVLKKHYELGCINEAVEL 468



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 42/167 (25%), Positives = 72/167 (43%), Gaps = 10/167 (5%)

Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLI 402
           A+ +F  +    G + +   YT M+  L +  Q  A   L +QM + G  P+   Y  L+
Sbjct: 324 AIDYFGRISNDFGLQANAAIYTAMIDGLCKGNQVEAATTLFEQMAQKGLVPDRTAYTSLM 383

Query: 403 HSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLS 462
               +   + EAL +  +M   G + D + Y +L+   +    L  A    ++M   G+ 
Sbjct: 384 DGNFKQGNVLEALALRDKMVETGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIH 443

Query: 463 PD-TFTYSVI-----INCLGKAGHLQA---AHQLFCEMVNQGCIPNL 500
           PD     SV+     + C+ +A  LQ+    HQL     N   +PN+
Sbjct: 444 PDEVLCISVLKKHYELGCINEAVELQSYLMKHQLLTS-DNDNALPNI 489


>gi|449443502|ref|XP_004139516.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16390,
           chloroplastic-like [Cucumis sativus]
 gi|449492820|ref|XP_004159111.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16390,
           chloroplastic-like [Cucumis sativus]
          Length = 704

 Score =  152 bits (385), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 125/521 (23%), Positives = 237/521 (45%), Gaps = 46/521 (8%)

Query: 316 EALGNTNYSMDAYQANQVLKQLQDHTVALGFFNWLRRQAGFKHDEHT--YTTMVGILGRA 373
           + +GN     DA      +   Q   +AL +F     Q   K  + T  Y   + +  + 
Sbjct: 138 KVIGNNILERDAILVLNNMSNSQTALLALRYF-----QDMLKSSKQTIFYNVTLKVFRKC 192

Query: 374 RQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTY 433
           R      KL ++M+  G +P+ VT++ +I      +  ++A++ F++M    C PD VTY
Sbjct: 193 RDMEGAEKLFEEMINRGVKPDNVTFSTIISCARLCSLPSKAVEWFEKMPSFDCNPDDVTY 252

Query: 434 CTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVN 493
            T+ID + +AG +D+A  +Y + +      D  T+S +I   G AG+      ++ EM  
Sbjct: 253 STMIDAYGRAGNVDMAFSLYDRARTENWRIDPATFSTMIKIHGVAGNYDGCLNVYEEMKA 312

Query: 494 QGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDE 553
            G  PNLV YN ++    +A+       +Y++M   GF P   TY+ ++   G   Y ++
Sbjct: 313 IGIKPNLVIYNCLLDAMGRAKRPWQIKTIYKEMIKNGFSPSWATYASLLRAYGRARYGED 372

Query: 554 AEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAG-LRPNVPTCNSLL 612
           A  V+ EM+ K    +  +Y  L+ +    G V +A E ++ M  +G   P+  T +S++
Sbjct: 373 ALIVYKEMKEKGLQLNVILYNTLLAMCADVGYVNEAVEIFQDMKSSGTCSPDSWTFSSMI 432

Query: 613 SAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYD-MGFCHELMAVSGH 671
           + +   G++S+A  +L  M+  G  P++   T L+ C  +A+   D +   ++L+ +   
Sbjct: 433 TIYSCGGKVSEAEEMLNDMVEAGFDPNIFVLTSLIQCYGKAKRVDDVVRTFNQLIELGLT 492

Query: 672 PAHMF---LLSMPSPGPDGQ---------NVRDHVGSFLEMMHSE-DRES---------- 708
           P   F   LL++ +  P G+              +G  +E++  E D+E           
Sbjct: 493 PDDRFCGCLLNVITQTPKGELGKLIDCVVRANPKLGFVVELLLGEQDKEGNFRTEASELF 552

Query: 709 -------KRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAVKEKGMSYWLINLHVM 761
                  ++   + ++D      L ++A  + ++     +Y D ++ +  + W + L  +
Sbjct: 553 SVVSADVRKAYCNCLIDLCVNLDLLDKACELLDLGLTLQIYKD-LQSRSPTQWSLYLKGL 611

Query: 762 SDGTAVIALSRTLAWFRK--QMLISGVG-PSRIDIVTGWGR 799
           S G A+ AL     W +   ++L SG   P  + I TG G+
Sbjct: 612 SLGAALTALH---VWIKDLTKVLESGEELPPLLGINTGHGK 649


>gi|326523953|dbj|BAJ96987.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 1092

 Score =  152 bits (385), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 106/417 (25%), Positives = 199/417 (47%), Gaps = 16/417 (3%)

Query: 233  RRRIVQPRSKAHSNRLNSNFKSNLQPSDAKVVECVSERFSKPSREMKIPAGLAPFSRHFA 292
            R  I+QP SK   + ++S  +  L+    +     +E  +     +     L+P  RHF 
Sbjct: 684  REYILQPDSKVDRSSVHSLMEGILKRDGTEKSIEFAENIASSGLLLD-DLFLSPIIRHFC 742

Query: 293  STGNVVESVSRILRQWKWGPLAEEALGNTNYSMDAYQANQVLKQLQDHT---VALGFFNW 349
                 + +   ++++++          N   S+     N ++  L D     +A   F+ 
Sbjct: 743  KHKEAL-AAHELVKKFE----------NLGVSLKTGSYNALICGLVDEDLIDIAEELFSE 791

Query: 350  LRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRAN 409
            ++R  G   DE TY  ++  +G++ +   + K+ ++M   G +   VTYN +I    ++ 
Sbjct: 792  MKR-LGCDPDEFTYHLILDAMGKSMRIEDMLKIQEEMHNKGYKSTYVTYNTIISGLVKSK 850

Query: 410  YLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYS 469
             L+EA++++ Q+   G  P   TY  L+D   K G ++ A  ++ +M   G  P+   Y+
Sbjct: 851  MLDEAINLYYQLMSEGFSPTPCTYGPLLDGLLKDGNIEDAEALFDEMLECGCEPNCAIYN 910

Query: 470  VIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNA 529
            +++N    AG  +   +LF  MV QG  P++ +Y ++I            L  ++ + + 
Sbjct: 911  ILLNGYRIAGDTEKVCELFESMVEQGMNPDIKSYTVVIDTLCADGRLNDGLSYFKQLTDM 970

Query: 530  GFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKA 589
            G EPD +TY++++  LG  G L+EA +++ +M +K   P+   Y  L+   GKAG   +A
Sbjct: 971  GLEPDLITYNLLIHGLGKSGRLEEALSLYNDMEKKGIAPNLYTYNSLILYLGKAGKAAEA 1030

Query: 590  WEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLL 646
             + YE +L  G +PNV T N+L+  +   G   +A+     M+  G +P+  TY  L
Sbjct: 1031 GKMYEELLAKGWKPNVFTYNALIRGYSVSGSPENAFAAYGRMIVGGCRPNSSTYMQL 1087



 Score =  151 bits (381), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 94/357 (26%), Positives = 176/357 (49%), Gaps = 2/357 (0%)

Query: 316  EALGNTNYSMDAYQANQVLKQLQDHTVALGFFNWLRR--QAGFKHDEHTYTTMVGILGRA 373
            E + ++   +D    + +++    H  AL     +++    G      +Y  ++  L   
Sbjct: 720  ENIASSGLLLDDLFLSPIIRHFCKHKEALAAHELVKKFENLGVSLKTGSYNALICGLVDE 779

Query: 374  RQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTY 433
                   +L  +M R GC P+  TY+ ++ + G++  + + L + ++M   G +   VTY
Sbjct: 780  DLIDIAEELFSEMKRLGCDPDEFTYHLILDAMGKSMRIEDMLKIQEEMHNKGYKSTYVTY 839

Query: 434  CTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVN 493
             T+I    K+  LD A+++Y ++ + G SP   TY  +++ L K G+++ A  LF EM+ 
Sbjct: 840  NTIISGLVKSKMLDEAINLYYQLMSEGFSPTPCTYGPLLDGLLKDGNIEDAEALFDEMLE 899

Query: 494  QGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDE 553
             GC PN   YNI++     A + +   +L+  M   G  PD  +Y++V++ L   G L++
Sbjct: 900  CGCEPNCAIYNILLNGYRIAGDTEKVCELFESMVEQGMNPDIKSYTVVIDTLCADGRLND 959

Query: 554  AEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLS 613
              + F ++      PD   Y LL+   GK+G + +A   Y  M + G+ PN+ T NSL+ 
Sbjct: 960  GLSYFKQLTDMGLEPDLITYNLLIHGLGKSGRLEEALSLYNDMEKKGIAPNLYTYNSLIL 1019

Query: 614  AFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGFCHELMAVSG 670
               + G+ ++A  + + +L  G KP++ TY  L+   + + SP +    +  M V G
Sbjct: 1020 YLGKAGKAAEAGKMYEELLAKGWKPNVFTYNALIRGYSVSGSPENAFAAYGRMIVGG 1076



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 86/318 (27%), Positives = 162/318 (50%), Gaps = 1/318 (0%)

Query: 349 WLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRA 408
           W  + +  K D  TY T++   G +    +++++ + +  DG   NVV+Y   + +  + 
Sbjct: 300 WKMKASDQKPDRVTYITLLDKCGDSGDSRSVSEIWNALKADGYNDNVVSYTAAVDALCQV 359

Query: 409 NYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTY 468
             ++EALDVF +M+  G  P + +Y +LI    KA   + A++++  M   G +P+ +T+
Sbjct: 360 GRVDEALDVFDEMKQKGIIPQQYSYNSLISGFLKADRFNRALELFNHMNIHGPTPNGYTH 419

Query: 469 SVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQN 528
            + IN  GK+G    A + +  M ++G +P++V  N ++   AK      A +++ +++ 
Sbjct: 420 VLFINYHGKSGESLKALKRYELMKSKGIVPDVVAGNAVLYGLAKTGRLGMAKRVFHELKA 479

Query: 529 AGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRK 588
            G  PD +TY+++++        DEA  +FAEM      PD      L+D+  KAG   +
Sbjct: 480 MGISPDNITYTMMIKCCSKASNADEAMKIFAEMIENRCAPDVLAMNSLIDMLYKAGRGNE 539

Query: 589 AWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
           AW+ +  + +  L P   T N+LL+   R G++ +   LL+GM +    P++ TY  +L 
Sbjct: 540 AWKIFYELKEMNLEPTDCTYNTLLAGLGREGKVKEVMQLLEGMNSNSFPPNIITYNTVLD 599

Query: 649 C-CTEARSPYDMGFCHEL 665
           C C      Y +   + +
Sbjct: 600 CLCKNGEVNYALDMLYSM 617



 Score =  140 bits (352), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 122/509 (23%), Positives = 222/509 (43%), Gaps = 51/509 (10%)

Query: 238 QPRSKAHSNRLNSNFKSNLQPSDAKVVECVSERFSKPSREMKIPAGLAPFSRHFASTGNV 297
           QPR   H+   + N+   L  +  +V + V++ F    R++ I A +  F   F + G  
Sbjct: 94  QPRV-VHTTE-SCNYMLELMRAHGRVGD-VAQVFDLMQRQI-IKANVGTFCTVFGAVG-- 147

Query: 298 VESVSRILRQWKWGPLAEEALGNTNYSMDAYQANQVLKQLQDHTVALGFFNWLRRQA--G 355
              V   LR     P+A   +      ++AY  N ++  L          +  +  A  G
Sbjct: 148 ---VEGGLRS---APVALPVMKEAGIVLNAYTYNGLIYFLVKSGFDREAMDVYKAMAADG 201

Query: 356 FKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEAL 415
                 TY+ ++   G+ R    +  LL +M   G +PNV +Y   I   G+A  L EA 
Sbjct: 202 VVPTVRTYSVLMLAFGKRRDAETVVGLLGEMEARGVRPNVYSYTICIRVLGQAGRLEEAY 261

Query: 416 DVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCL 475
            + ++M+  GC+PD VT   LI I   AG L  A D++ KM+A+   PD  TY  +++  
Sbjct: 262 RILRKMEEEGCKPDVVTNTVLIQILCDAGRLADAKDVFWKMKASDQKPDRVTYITLLDKC 321

Query: 476 GKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDK 535
           G +G  ++  +++  +   G   N+V+Y   +    +      AL ++ +M+  G  P +
Sbjct: 322 GDSGDSRSVSEIWNALKADGYNDNVVSYTAAVDALCQVGRVDEALDVFDEMKQKGIIPQQ 381

Query: 536 VTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEA 595
            +Y+ ++         + A  +F  M      P+   + L ++  GK+G   KA + YE 
Sbjct: 382 YSYNSLISGFLKADRFNRALELFNHMNIHGPTPNGYTHVLFINYHGKSGESLKALKRYEL 441

Query: 596 MLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARS 655
           M   G+ P+V   N++L    + G+L  A  +   +  +G+ P   TYT+++ CC++A  
Sbjct: 442 MKSKGIVPDVVAGNAVLYGLAKTGRLGMAKRVFHELKAMGISPDNITYTMMIKCCSKA-- 499

Query: 656 PYDMGFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRESKRGL-VD 714
                                            N  + +  F EM+  E+R +   L ++
Sbjct: 500 --------------------------------SNADEAMKIFAEMI--ENRCAPDVLAMN 525

Query: 715 AVVDFLHKSGLKEEAGSVWEVAAQKNVYP 743
           +++D L+K+G   EA  ++    + N+ P
Sbjct: 526 SLIDMLYKAGRGNEAWKIFYELKEMNLEP 554



 Score =  139 bits (351), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 84/301 (27%), Positives = 149/301 (49%), Gaps = 1/301 (0%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           G+  +  +YT  V  L +  +      + D+M + G  P   +YN LI  + +A+  N A
Sbjct: 341 GYNDNVVSYTAAVDALCQVGRVDEALDVFDEMKQKGIIPQQYSYNSLISGFLKADRFNRA 400

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
           L++F  M + G  P+  T+   I+ H K+G    A+  Y+ M++ G+ PD    + ++  
Sbjct: 401 LELFNHMNIHGPTPNGYTHVLFINYHGKSGESLKALKRYELMKSKGIVPDVVAGNAVLYG 460

Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPD 534
           L K G L  A ++F E+   G  P+ +TY +MI   +KA N   A+K++ +M      PD
Sbjct: 461 LAKTGRLGMAKRVFHELKAMGISPDNITYTMMIKCCSKASNADEAMKIFAEMIENRCAPD 520

Query: 535 KVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYE 594
            +  + ++++L   G  +EA  +F E++  N  P +  Y  L+   G+ G V++  +  E
Sbjct: 521 VLAMNSLIDMLYKAGRGNEAWKIFYELKEMNLEPTDCTYNTLLAGLGREGKVKEVMQLLE 580

Query: 595 AMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTY-TLLLSCCTEA 653
            M      PN+ T N++L    + G+++ A  +L  M   G  P L +Y T++     E 
Sbjct: 581 GMNSNSFPPNIITYNTVLDCLCKNGEVNYALDMLYSMTMNGCMPDLSSYNTVMYGLVKEG 640

Query: 654 R 654
           R
Sbjct: 641 R 641



 Score =  139 bits (349), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 101/376 (26%), Positives = 174/376 (46%), Gaps = 52/376 (13%)

Query: 324 SMDAYQA---NQVLKQLQDHTVALGFFNWLRRQA-------------GFKHDEHTYTTMV 367
           +MD Y+A   + V+  ++ ++V +  F   RR A             G + + ++YT  +
Sbjct: 190 AMDVYKAMAADGVVPTVRTYSVLMLAFGK-RRDAETVVGLLGEMEARGVRPNVYSYTICI 248

Query: 368 GILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCE 427
            +LG+A +     ++L +M  +GC+P+VVT   LI     A  L +A DVF +M+    +
Sbjct: 249 RVLGQAGRLEEAYRILRKMEEEGCKPDVVTNTVLIQILCDAGRLADAKDVFWKMKASDQK 308

Query: 428 PDRVTYCTL-----------------------------------IDIHAKAGFLDVAMDM 452
           PDRVTY TL                                   +D   + G +D A+D+
Sbjct: 309 PDRVTYITLLDKCGDSGDSRSVSEIWNALKADGYNDNVVSYTAAVDALCQVGRVDEALDV 368

Query: 453 YKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAK 512
           + +M+  G+ P  ++Y+ +I+   KA     A +LF  M   G  PN  T+ + I    K
Sbjct: 369 FDEMKQKGIIPQQYSYNSLISGFLKADRFNRALELFNHMNIHGPTPNGYTHVLFINYHGK 428

Query: 513 ARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPV 572
           +     ALK Y  M++ G  PD V  + V+  L   G L  A+ VF E++     PD   
Sbjct: 429 SGESLKALKRYELMKSKGIVPDVVAGNAVLYGLAKTGRLGMAKRVFHELKAMGISPDNIT 488

Query: 573 YGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGML 632
           Y +++    KA N  +A + +  M++    P+V   NSL+    + G+ ++A+ +   + 
Sbjct: 489 YTMMIKCCSKASNADEAMKIFAEMIENRCAPDVLAMNSLIDMLYKAGRGNEAWKIFYELK 548

Query: 633 NLGLKPSLQTYTLLLS 648
            + L+P+  TY  LL+
Sbjct: 549 EMNLEPTDCTYNTLLA 564



 Score =  132 bits (333), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 90/310 (29%), Positives = 148/310 (47%)

Query: 339 DHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTY 398
           D   AL  F  + RQ    H   +   M+ ++    + G + ++ D M R   + NV T+
Sbjct: 80  DPEEALELFLSVARQPRVVHTTESCNYMLELMRAHGRVGDVAQVFDLMQRQIIKANVGTF 139

Query: 399 NRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQA 458
             +  + G    L  A      M+  G   +  TY  LI    K+GF   AMD+YK M A
Sbjct: 140 CTVFGAVGVEGGLRSAPVALPVMKEAGIVLNAYTYNGLIYFLVKSGFDREAMDVYKAMAA 199

Query: 459 AGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQS 518
            G+ P   TYSV++   GK    +    L  EM  +G  PN+ +Y I I +  +A   + 
Sbjct: 200 DGVVPTVRTYSVLMLAFGKRRDAETVVGLLGEMEARGVRPNVYSYTICIRVLGQAGRLEE 259

Query: 519 ALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVD 578
           A ++ R M+  G +PD VT ++++++L   G L +A+ VF +M+  +  PD   Y  L+D
Sbjct: 260 AYRILRKMEEEGCKPDVVTNTVLIQILCDAGRLADAKDVFWKMKASDQKPDRVTYITLLD 319

Query: 579 LWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKP 638
             G +G+ R   E + A+   G   NV +  + + A  +VG++ +A  +   M   G+ P
Sbjct: 320 KCGDSGDSRSVSEIWNALKADGYNDNVVSYTAAVDALCQVGRVDEALDVFDEMKQKGIIP 379

Query: 639 SLQTYTLLLS 648
              +Y  L+S
Sbjct: 380 QQYSYNSLIS 389



 Score =  128 bits (322), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 104/410 (25%), Positives = 186/410 (45%), Gaps = 24/410 (5%)

Query: 300 SVSRILRQWKWGPLAEEALGNTNYSMDAYQANQVLKQLQDHTVALGFFNWLRRQAGFKHD 359
           SVS I     W  L  +   +   S  A  A   L Q+     AL  F+ ++ Q G    
Sbjct: 329 SVSEI-----WNALKADGYNDNVVSYTA--AVDALCQVGRVDEALDVFDEMK-QKGIIPQ 380

Query: 360 EHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFK 419
           +++Y +++    +A +F    +L + M   G  PN  T+   I+ +G++    +AL  ++
Sbjct: 381 QYSYNSLISGFLKADRFNRALELFNHMNIHGPTPNGYTHVLFINYHGKSGESLKALKRYE 440

Query: 420 QMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAG 479
            M+  G  PD V    ++   AK G L +A  ++ +++A G+SPD  TY+++I C  KA 
Sbjct: 441 LMKSKGIVPDVVAGNAVLYGLAKTGRLGMAKRVFHELKAMGISPDNITYTMMIKCCSKAS 500

Query: 480 HLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYS 539
           +   A ++F EM+   C P+++  N +I +  KA     A K++ +++    EP   TY+
Sbjct: 501 NADEAMKIFAEMIENRCAPDVLAMNSLIDMLYKAGRGNEAWKIFYELKEMNLEPTDCTYN 560

Query: 540 IVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQA 599
            ++  LG  G + E   +   M   ++ P+   Y  ++D   K G V  A +   +M   
Sbjct: 561 TLLAGLGREGKVKEVMQLLEGMNSNSFPPNIITYNTVLDCLCKNGEVNYALDMLYSMTMN 620

Query: 600 GLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDM 659
           G  P++ + N+++   ++ G+L +A+ +   M  + L P   T       CT   S    
Sbjct: 621 GCMPDLSSYNTVMYGLVKEGRLDEAFWMFCQMKKV-LAPDYAT------VCTILPSFVRS 673

Query: 660 GFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRESK 709
           G   E +    H    ++L      PD +  R  V S +E +   D   K
Sbjct: 674 GLMKEAL----HTVREYILQ-----PDSKVDRSSVHSLMEGILKRDGTEK 714



 Score =  119 bits (298), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 82/337 (24%), Positives = 159/337 (47%), Gaps = 47/337 (13%)

Query: 414  ALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIIN 473
            A ++ K+ + +G      +Y  LI        +D+A +++ +M+  G  PD FTY +I++
Sbjct: 750  AHELVKKFENLGVSLKTGSYNALICGLVDEDLIDIAEELFSEMKRLGCDPDEFTYHLILD 809

Query: 474  CLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEP 533
             +GK+  ++   ++  EM N+G     VTYN +I+   K++    A+ LY  + + GF P
Sbjct: 810  AMGKSMRIEDMLKIQEEMHNKGYKSTYVTYNTIISGLVKSKMLDEAINLYYQLMSEGFSP 869

Query: 534  DKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWY 593
               TY  +++ L   G +++AEA+F EM      P+  +Y +L++ +  AG+  K  E +
Sbjct: 870  TPCTYGPLLDGLLKDGNIEDAEALFDEMLECGCEPNCAIYNILLNGYRIAGDTEKVCELF 929

Query: 594  EAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEA 653
            E+M++ G+ P++ +   ++      G+L+D     + + ++GL+P L TY LL+      
Sbjct: 930  ESMVEQGMNPDIKSYTVVIDTLCADGRLNDGLSYFKQLTDMGLEPDLITYNLLI------ 983

Query: 654  RSPYDMGFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRESKRGLV 713
                     H L                     G++     G   E +   +   K+G+ 
Sbjct: 984  ---------HGL---------------------GKS-----GRLEEALSLYNDMEKKGIA 1008

Query: 714  ------DAVVDFLHKSGLKEEAGSVWEVAAQKNVYPD 744
                  ++++ +L K+G   EAG ++E    K   P+
Sbjct: 1009 PNLYTYNSLILYLGKAGKAAEAGKMYEELLAKGWKPN 1045



 Score =  102 bits (253), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 89/391 (22%), Positives = 172/391 (43%), Gaps = 18/391 (4%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           +  G   D  TYT M+    +A       K+  +M+ + C P+V+  N LI    +A   
Sbjct: 478 KAMGISPDNITYTMMIKCCSKASNADEAMKIFAEMIENRCAPDVLAMNSLIDMLYKAGRG 537

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
           NEA  +F +++ +  EP   TY TL+    + G +   M + + M +    P+  TY+ +
Sbjct: 538 NEAWKIFYELKEMNLEPTDCTYNTLLAGLGREGKVKEVMQLLEGMNSNSFPPNIITYNTV 597

Query: 472 INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF 531
           ++CL K G +  A  +   M   GC+P+L +YN ++    K      A  ++  M+    
Sbjct: 598 LDCLCKNGEVNYALDMLYSMTMNGCMPDLSSYNTVMYGLVKEGRLDEAFWMFCQMKKV-L 656

Query: 532 EPDKVTYSIVMEVLGHCGYLDEAEAVFAE--MRRKNWVPDEPVYGLLVDLWGKAGNVRKA 589
            PD  T   ++      G + EA     E  ++  + V    V+ L+  +  + G   K+
Sbjct: 657 APDYATVCTILPSFVRSGLMKEALHTVREYILQPDSKVDRSSVHSLMEGILKRDGT-EKS 715

Query: 590 WEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSC 649
            E+ E +  +GL  +    + ++  F +  +   A+ L++   NLG+     +Y  L+ C
Sbjct: 716 IEFAENIASSGLLLDDLFLSPIIRHFCKHKEALAAHELVKKFENLGVSLKTGSYNALI-C 774

Query: 650 CTEARSPYDMG--FCHELMAVSGHP----AHMFLLSMPSPGPDGQNVR-DHVGSFLEMMH 702
                   D+      E+  +   P     H+ L +M      G+++R + +    E MH
Sbjct: 775 GLVDEDLIDIAEELFSEMKRLGCDPDEFTYHLILDAM------GKSMRIEDMLKIQEEMH 828

Query: 703 SEDRESKRGLVDAVVDFLHKSGLKEEAGSVW 733
           ++  +S     + ++  L KS + +EA +++
Sbjct: 829 NKGYKSTYVTYNTIISGLVKSKMLDEAINLY 859



 Score = 80.1 bits (196), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 64/245 (26%), Positives = 108/245 (44%), Gaps = 7/245 (2%)

Query: 413 EALDVF----KQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTY 468
           EAL++F    +Q +VV           L+  H + G  DVA  ++  MQ   +  +  T+
Sbjct: 83  EALELFLSVARQPRVVHTTESCNYMLELMRAHGRVG--DVA-QVFDLMQRQIIKANVGTF 139

Query: 469 SVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQN 528
             +   +G  G L++A      M   G + N  TYN +I    K+   + A+ +Y+ M  
Sbjct: 140 CTVFGAVGVEGGLRSAPVALPVMKEAGIVLNAYTYNGLIYFLVKSGFDREAMDVYKAMAA 199

Query: 529 AGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRK 588
            G  P   TYS++M   G     +    +  EM  +   P+   Y + + + G+AG + +
Sbjct: 200 DGVVPTVRTYSVLMLAFGKRRDAETVVGLLGEMEARGVRPNVYSYTICIRVLGQAGRLEE 259

Query: 589 AWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
           A+     M + G +P+V T   L+      G+L+DA  +   M     KP   TY  LL 
Sbjct: 260 AYRILRKMEEEGCKPDVVTNTVLIQILCDAGRLADAKDVFWKMKASDQKPDRVTYITLLD 319

Query: 649 CCTEA 653
            C ++
Sbjct: 320 KCGDS 324


>gi|302825350|ref|XP_002994298.1| hypothetical protein SELMODRAFT_138440 [Selaginella moellendorffii]
 gi|300137829|gb|EFJ04642.1| hypothetical protein SELMODRAFT_138440 [Selaginella moellendorffii]
          Length = 577

 Score =  152 bits (385), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 122/473 (25%), Positives = 214/473 (45%), Gaps = 51/473 (10%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDG--CQPNVVTYNRLIHSYGRAN 409
           ++ G K D   ++T++  L R    G I++ L+Q    G  C PNV+TYN +++   +AN
Sbjct: 26  KERGVKMDVLLHSTLIQGLCRK---GRIDEALEQFKSMGEECSPNVITYNTVVNGLCKAN 82

Query: 410 YLNEALDVFKQMQVV-----GCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPD 464
            ++E L++F  M+       GCEPD ++Y T+ID   KA  +D A + +K+M+A G +P+
Sbjct: 83  RIDEGLELFDDMEKRYEASHGCEPDVISYSTVIDALCKAQRVDKAYEYFKRMRAVGCAPN 142

Query: 465 TFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIP-------------------------- 498
             TYS +I+ L K   +  A+ L  ++  +  +P                          
Sbjct: 143 VVTYSSLIDGLCKVDRVDEAYSLLMQLKGEDMVPRAMYYNAVVNGFKRQGKPSECLELLL 202

Query: 499 ---------NLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCG 549
                    N++ +N M+    K    + A + +  +  +G +P+ VTY++ +  L   G
Sbjct: 203 HMKEKGFGINIIDFNAMLHALWKNDEQEKACQFFERLLKSGKKPNVVTYNVAVHGLCKAG 262

Query: 550 YLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCN 609
            +DEA  +  EM      PD   Y  ++D + KAG + KA + +  M+     P+  T  
Sbjct: 263 KVDEAYRILLEMVESKVTPDVITYSSIIDGFCKAGRMDKADDVFTRMMVHECIPHPVTFM 322

Query: 610 SLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYD-MGFCHELMAV 668
           +LL  F    +  +A+ + + M+N G  P LQTY +L+ C   A S    +   H++   
Sbjct: 323 TLLHGFSEHKKSREAFRVHEDMVNAGFIPGLQTYNVLMDCVCGADSVESALEIYHKMKRK 382

Query: 669 SGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRESKRGLVDAVVDFLHKSGLKEE 728
              P       +       + V D    FL++M +++      +  A+V+ L K G  +E
Sbjct: 383 KRQPDANTYAPLIQCLCRARRV-DEAKEFLDVMEADNVVPNGAICHALVEVLCKQGEVDE 441

Query: 729 AGSVWE--VAAQKNVYPDAVKEKGMSYWLINLHVMSDGTAVIALSRTLAWFRK 779
           A SV +  V   K   PD   E  +   ++   V  D    +A+ R+L    +
Sbjct: 442 ACSVLDNVVEICKAGEPDEAVE--VIEQMVLKGVRPDEATYVAVLRSLCGLDR 492



 Score =  131 bits (329), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 85/315 (26%), Positives = 153/315 (48%), Gaps = 19/315 (6%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           ++ GF  +   +  M+  L +  +     +  +++++ G +PNVVTYN  +H   +A  +
Sbjct: 205 KEKGFGINIIDFNAMLHALWKNDEQEKACQFFERLLKSGKKPNVVTYNVAVHGLCKAGKV 264

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
           +EA  +  +M      PD +TY ++ID   KAG +D A D++ +M      P   T+  +
Sbjct: 265 DEAYRILLEMVESKVTPDVITYSSIIDGFCKAGRMDKADDVFTRMMVHECIPHPVTFMTL 324

Query: 472 INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF 531
           ++   +    + A ++  +MVN G IP L TYN+++     A + +SAL++Y  M+    
Sbjct: 325 LHGFSEHKKSREAFRVHEDMVNAGFIPGLQTYNVLMDCVCGADSVESALEIYHKMKRKKR 384

Query: 532 EPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAW- 590
           +PD  TY+ +++ L     +DEA+     M   N VP+  +   LV++  K G V +A  
Sbjct: 385 QPDANTYAPLIQCLCRARRVDEAKEFLDVMEADNVVPNGAICHALVEVLCKQGEVDEACS 444

Query: 591 ------------------EWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGML 632
                             E  E M+  G+RP+  T  ++L +   + ++  A    + M 
Sbjct: 445 VLDNVVEICKAGEPDEAVEVIEQMVLKGVRPDEATYVAVLRSLCGLDRVDSAIAEFEKMA 504

Query: 633 NLGLKPSLQTYTLLL 647
           + G  P L TYTLL+
Sbjct: 505 SRGCAPGLVTYTLLI 519



 Score = 95.1 bits (235), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 84/331 (25%), Positives = 134/331 (40%), Gaps = 55/331 (16%)

Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLI 402
           A  FF  L + +G K +  TY   V  L +A +     ++L +MV     P+V+TY+ +I
Sbjct: 232 ACQFFERLLK-SGKKPNVVTYNVAVHGLCKAGKVDEAYRILLEMVESKVTPDVITYSSII 290

Query: 403 HSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLID-------------IH---AKAGFL 446
             + +A  +++A DVF +M V  C P  VT+ TL+              +H     AGF+
Sbjct: 291 DGFCKAGRMDKADDVFTRMMVHECIPHPVTFMTLLHGFSEHKKSREAFRVHEDMVNAGFI 350

Query: 447 -------------------DVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQL 487
                              + A+++Y KM+     PD  TY+ +I CL +A  +  A + 
Sbjct: 351 PGLQTYNVLMDCVCGADSVESALEIYHKMKRKKRQPDANTYAPLIQCLCRARRVDEAKEF 410

Query: 488 FCEMVNQGCIPNLVTYNIMIALQAK-------------------ARNYQSALKLYRDMQN 528
              M     +PN    + ++ +  K                   A     A+++   M  
Sbjct: 411 LDVMEADNVVPNGAICHALVEVLCKQGEVDEACSVLDNVVEICKAGEPDEAVEVIEQMVL 470

Query: 529 AGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRK 588
            G  PD+ TY  V+  L     +D A A F +M  +   P    Y LL+     A     
Sbjct: 471 KGVRPDEATYVAVLRSLCGLDRVDSAIAEFEKMASRGCAPGLVTYTLLIGEACSADMADD 530

Query: 589 AWEWYEAMLQAGLRPNVPTCNSLLSAFLRVG 619
           A+  +EAM+ AG  P   T  +L S     G
Sbjct: 531 AFRIFEAMVAAGFTPQAQTMRTLSSCLRDAG 561



 Score = 79.0 bits (193), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 57/210 (27%), Positives = 93/210 (44%), Gaps = 17/210 (8%)

Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLI 402
           AL  ++ ++R+   + D +TY  ++  L RAR+     + LD M  D   PN    + L+
Sbjct: 372 ALEIYHKMKRKKR-QPDANTYAPLIQCLCRARRVDEAKEFLDVMEADNVVPNGAICHALV 430

Query: 403 HSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLS 462
               +   ++EA  V   +         V  C       KAG  D A+++ ++M   G+ 
Sbjct: 431 EVLCKQGEVDEACSVLDNV---------VEIC-------KAGEPDEAVEVIEQMVLKGVR 474

Query: 463 PDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKL 522
           PD  TY  ++  L     + +A   F +M ++GC P LVTY ++I     A     A ++
Sbjct: 475 PDEATYVAVLRSLCGLDRVDSAIAEFEKMASRGCAPGLVTYTLLIGEACSADMADDAFRI 534

Query: 523 YRDMQNAGFEPDKVTYSIVMEVLGHCGYLD 552
           +  M  AGF P   T   +   L   GY D
Sbjct: 535 FEAMVAAGFTPQAQTMRTLSSCLRDAGYQD 564



 Score = 43.1 bits (100), Expect = 0.70,   Method: Compositional matrix adjust.
 Identities = 30/95 (31%), Positives = 45/95 (47%), Gaps = 2/95 (2%)

Query: 355 GFKHDEHTYTTMV-GILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNE 413
           G + DE TY  ++  + G  R   AI +  ++M   GC P +VTY  LI     A+  ++
Sbjct: 472 GVRPDEATYVAVLRSLCGLDRVDSAIAEF-EKMASRGCAPGLVTYTLLIGEACSADMADD 530

Query: 414 ALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDV 448
           A  +F+ M   G  P   T  TL      AG+ D+
Sbjct: 531 AFRIFEAMVAAGFTPQAQTMRTLSSCLRDAGYQDL 565


>gi|297837133|ref|XP_002886448.1| hypothetical protein ARALYDRAFT_475066 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297332289|gb|EFH62707.1| hypothetical protein ARALYDRAFT_475066 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 332

 Score =  152 bits (385), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 88/262 (33%), Positives = 136/262 (51%)

Query: 386 MVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGF 445
           MV  GCQ +VV +N L++   R   + EA  +  +M   G +P+ VTY T+++   K G 
Sbjct: 1   MVEKGCQHDVVAFNTLMNGLCREGRVLEAEALVDRMVENGHQPNEVTYGTIVNGMCKMGD 60

Query: 446 LDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNI 505
            D A+++ +KM  + +  D   Y+ II+ L K GH   A  LF EM ++G  PN++TYN 
Sbjct: 61  TDSALNLLRKMDESHIKADVVIYTAIIDRLCKDGHHSKAQNLFTEMHDKGIFPNVLTYNC 120

Query: 506 MIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKN 565
           MI        +  A +L RDM  +  +PD VT++ ++      G + EAE ++ EM  +N
Sbjct: 121 MIDGCCSYGKWTDAEQLLRDMIESNVDPDVVTFNALINAFVKEGKISEAEELYREMLGRN 180

Query: 566 WVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAY 625
             PD   Y  L+D + K   +  A   ++ M+  G  PNV T N+L+    R  ++ D  
Sbjct: 181 IFPDTITYNSLIDGFCKHSRLDDAKHIFDLMVSKGGSPNVITINTLIGGCCRAKRVDDGI 240

Query: 626 HLLQGMLNLGLKPSLQTYTLLL 647
            LL  ML  GL P   +Y  L+
Sbjct: 241 KLLHEMLRRGLVPDSVSYNTLI 262



 Score =  125 bits (315), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 80/283 (28%), Positives = 139/283 (49%), Gaps = 4/283 (1%)

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
           + G +HD   + T++  L R  +      L+D+MV +G QPN VTY  +++   +    +
Sbjct: 3   EKGCQHDVVAFNTLMNGLCREGRVLEAEALVDRMVENGHQPNEVTYGTIVNGMCKMGDTD 62

Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
            AL++ ++M     + D V Y  +ID   K G    A +++ +M   G+ P+  TY+ +I
Sbjct: 63  SALNLLRKMDESHIKADVVIYTAIIDRLCKDGHHSKAQNLFTEMHDKGIFPNVLTYNCMI 122

Query: 473 NCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFE 532
           +     G    A QL  +M+     P++VT+N +I    K      A +LYR+M      
Sbjct: 123 DGCCSYGKWTDAEQLLRDMIESNVDPDVVTFNALINAFVKEGKISEAEELYREMLGRNIF 182

Query: 533 PDKVTYSIVMEVLGHCGY--LDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAW 590
           PD +TY+ +++  G C +  LD+A+ +F  M  K   P+      L+    +A  V    
Sbjct: 183 PDTITYNSLID--GFCKHSRLDDAKHIFDLMVSKGGSPNVITINTLIGGCCRAKRVDDGI 240

Query: 591 EWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLN 633
           +    ML+ GL P+  + N+L+  F + G L+ A  L Q M++
Sbjct: 241 KLLHEMLRRGLVPDSVSYNTLIHGFCQAGDLNAAQDLFQEMIS 283



 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 39/136 (28%), Positives = 70/136 (51%)

Query: 359 DEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVF 418
           D  T+  ++    +  +     +L  +M+     P+ +TYN LI  + + + L++A  +F
Sbjct: 149 DVVTFNALINAFVKEGKISEAEELYREMLGRNIFPDTITYNSLIDGFCKHSRLDDAKHIF 208

Query: 419 KQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKA 478
             M   G  P+ +T  TLI    +A  +D  + +  +M   GL PD+ +Y+ +I+   +A
Sbjct: 209 DLMVSKGGSPNVITINTLIGGCCRAKRVDDGIKLLHEMLRRGLVPDSVSYNTLIHGFCQA 268

Query: 479 GHLQAAHQLFCEMVNQ 494
           G L AA  LF EM++Q
Sbjct: 269 GDLNAAQDLFQEMISQ 284



 Score = 67.4 bits (163), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 41/158 (25%), Positives = 74/158 (46%)

Query: 491 MVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGY 550
           MV +GC  ++V +N ++    +      A  L   M   G +P++VTY  ++  +   G 
Sbjct: 1   MVEKGCQHDVVAFNTLMNGLCREGRVLEAEALVDRMVENGHQPNEVTYGTIVNGMCKMGD 60

Query: 551 LDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNS 610
            D A  +  +M   +   D  +Y  ++D   K G+  KA   +  M   G+ PNV T N 
Sbjct: 61  TDSALNLLRKMDESHIKADVVIYTAIIDRLCKDGHHSKAQNLFTEMHDKGIFPNVLTYNC 120

Query: 611 LLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
           ++      G+ +DA  LL+ M+   + P + T+  L++
Sbjct: 121 MIDGCCSYGKWTDAEQLLRDMIESNVDPDVVTFNALIN 158



 Score = 51.2 bits (121), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 33/130 (25%), Positives = 61/130 (46%), Gaps = 1/130 (0%)

Query: 526 MQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGN 585
           M   G + D V ++ +M  L   G + EAEA+   M      P+E  YG +V+   K G+
Sbjct: 1   MVEKGCQHDVVAFNTLMNGLCREGRVLEAEALVDRMVENGHQPNEVTYGTIVNGMCKMGD 60

Query: 586 VRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTL 645
              A      M ++ ++ +V    +++    + G  S A +L   M + G+ P++ TY  
Sbjct: 61  TDSALNLLRKMDESHIKADVVIYTAIIDRLCKDGHHSKAQNLFTEMHDKGIFPNVLTYNC 120

Query: 646 LLS-CCTEAR 654
           ++  CC+  +
Sbjct: 121 MIDGCCSYGK 130


>gi|297789717|ref|XP_002862796.1| hypothetical protein ARALYDRAFT_359368 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297308523|gb|EFH39054.1| hypothetical protein ARALYDRAFT_359368 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 378

 Score =  152 bits (385), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 89/334 (26%), Positives = 157/334 (47%)

Query: 291 FASTGNVVESVSRILRQWKWGPLAEEALGNTNYSMDAYQANQVLKQLQDHTVALGFFNWL 350
           F     +V  +  +L    WG  AE AL    +         VL++L+D   A+ +F W 
Sbjct: 43  FEGNRQIVNDICNVLETGAWGSSAENALSALFFKPQPEFVIGVLRRLKDVNRAIEYFRWY 102

Query: 351 RRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANY 410
            R+    H   +Y +++ ++ R R F A++++L +M   G  P+V T   ++ S  +AN 
Sbjct: 103 ERRTELPHCPESYNSLLLVMARCRNFDALDQILGEMSVAGFGPSVNTCIEMVLSCVKANK 162

Query: 411 LNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSV 470
           L E  DV + M+     P    Y TLI   +     D+ + ++++MQ  G  P    ++ 
Sbjct: 163 LREGFDVVQNMRKFKFRPAFSAYTTLIGAFSAVNHSDMMLALFQQMQELGYEPTVHLFTT 222

Query: 471 IINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAG 530
           +I    K G + +A  L  EM +     ++V YN+ I    K      A K + +++  G
Sbjct: 223 LIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANG 282

Query: 531 FEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAW 590
            +PD+VTY+ ++ VL     LDEA  +F  + +   VP    Y  ++  +G AG   +A+
Sbjct: 283 LKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAY 342

Query: 591 EWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDA 624
              E     G  P+V   N +L+   ++G++ +A
Sbjct: 343 SLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEA 376



 Score = 89.4 bits (220), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 46/170 (27%), Positives = 87/170 (51%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           ++ G++   H +TT++    +  +  +   LLD+M       ++V YN  I S+G+   +
Sbjct: 209 QELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKV 268

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
           + A   F +++  G +PD VTY ++I +  KA  LD A++M++ ++     P T+ Y+ +
Sbjct: 269 DMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTM 328

Query: 472 INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALK 521
           I   G AG    A+ L      +G IP+++ YN ++    K      AL+
Sbjct: 329 IMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALR 378



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 40/187 (21%), Positives = 82/187 (43%)

Query: 467 TYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDM 526
           +Y+ ++  + +  +  A  Q+  EM   G  P++ T   M+    KA   +    + ++M
Sbjct: 114 SYNSLLLVMARCRNFDALDQILGEMSVAGFGPSVNTCIEMVLSCVKANKLREGFDVVQNM 173

Query: 527 QNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNV 586
           +   F P    Y+ ++       + D   A+F +M+   + P   ++  L+  + K G V
Sbjct: 174 RKFKFRPAFSAYTTLIGAFSAVNHSDMMLALFQQMQELGYEPTVHLFTTLIRGFAKEGRV 233

Query: 587 RKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLL 646
             A    + M  + L  ++   N  + +F +VG++  A+     +   GLKP   TYT +
Sbjct: 234 DSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSM 293

Query: 647 LSCCTEA 653
           +    +A
Sbjct: 294 IGVLCKA 300


>gi|255660824|gb|ACU25581.1| pentatricopeptide repeat-containing protein [Mulguraea aspera]
          Length = 418

 Score =  152 bits (385), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 88/299 (29%), Positives = 159/299 (53%)

Query: 350 LRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRAN 409
           L ++  F+    T   ++  L + + F  +    ++ +  G   ++  +N L+H + +  
Sbjct: 91  LTKEHKFRVPFDTCRKVIEHLMKLKYFKLVWGFYEESLECGYPASLYFFNILMHXFCKEG 150

Query: 410 YLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYS 469
            +  A  VF  +   G  P  V++ TL++ + K G LD    +   MQA+G+ PD +TYS
Sbjct: 151 EIRLAQSVFDSITKWGLRPSVVSFNTLMNGYIKIGDLDEGFRLKSVMQASGVHPDVYTYS 210

Query: 470 VIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNA 529
           V+IN L K   +  A++LF EM+B G +PN VT+  +I    K      A+++YR M + 
Sbjct: 211 VLINGLCKESKMDDANELFDEMLBNGLVPNXVTFTTLIDGHCKNGRVDLAMEIYRQMLSQ 270

Query: 530 GFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKA 589
              PD +TY+ ++  L   G L +A  +  EM  K   PD+  Y  L+D   K G++  A
Sbjct: 271 SLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKITYTTLIDGXCKEGDLETA 330

Query: 590 WEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
           +E+ + M++  +R +     +L+S   + G+  DA  +L+ ML++GLKP + TYT++++
Sbjct: 331 FEYRKRMIKENIRXDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIIN 389


>gi|299471515|emb|CBN80001.1| conserved unknown protein [Ectocarpus siliculosus]
          Length = 687

 Score =  152 bits (385), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 87/315 (27%), Positives = 156/315 (49%), Gaps = 1/315 (0%)

Query: 359 DEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVF 418
           D  +Y++++   GR R++     LL+QM   G  PNV++YN  I +  + +   EALD+ 
Sbjct: 286 DVISYSSVIAACGRGRRWKEAMDLLEQMRTQGVSPNVISYNSAIDACAKGDRWKEALDLL 345

Query: 419 KQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKA 478
           ++M  VG  P  ++Y +     A  G    A+++ K+M A G++P+T +Y+  ++   K 
Sbjct: 346 REMTTVGLVPTVISYNSATAACAVNGRWVEALELLKEMPAQGIAPNTISYNSALDACAKG 405

Query: 479 GHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTY 538
           G  + A +L   M   G  P+++++N  I    + + +++A++L R+M  AG  P+ +TY
Sbjct: 406 GQWEKAVKLLRGMSTVGSDPDIISFNSAIDACGRGQQWETAVELLREMPTAGLTPNVITY 465

Query: 539 SIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQ 598
           +  +E  G      EA  +F EM  +   P+   Y  ++D   K      A +    M  
Sbjct: 466 NSAIEACGRSARWQEAMGLFREMPTRGLSPNVVTYNSMIDACAKGEQWELAVQLLTGMPA 525

Query: 599 AGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTY-TLLLSCCTEARSPY 657
            G+ P+V + NS + A  +  Q   A  LL+GM   G KP + +Y + + +C    R   
Sbjct: 526 RGVAPDVISYNSAIEACGKGEQWELALQLLKGMPTRGPKPDIISYNSAVTACAKSGRWRE 585

Query: 658 DMGFCHELMAVSGHP 672
            +G   ++  V   P
Sbjct: 586 ALGLLKDMATVGLTP 600



 Score =  141 bits (355), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 79/263 (30%), Positives = 132/263 (50%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           G   D  ++ + +   GR +Q+    +LL +M   G  PNV+TYN  I + GR+    EA
Sbjct: 422 GSDPDIISFNSAIDACGRGQQWETAVELLREMPTAGLTPNVITYNSAIEACGRSARWQEA 481

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
           + +F++M   G  P+ VTY ++ID  AK    ++A+ +   M A G++PD  +Y+  I  
Sbjct: 482 MGLFREMPTRGLSPNVVTYNSMIDACAKGEQWELAVQLLTGMPARGVAPDVISYNSAIEA 541

Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPD 534
            GK    + A QL   M  +G  P++++YN  +   AK+  ++ AL L +DM   G  P+
Sbjct: 542 CGKGEQWELALQLLKGMPTRGPKPDIISYNSAVTACAKSGRWREALGLLKDMATVGLTPN 601

Query: 535 KVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYE 594
            V+Y   +   G     D A  +  EM+     P+   Y   +D   K G  ++A +   
Sbjct: 602 TVSYGAAIHACGKGEQWDVAVRILKEMQTHGATPNLITYSAAIDACAKQGRWKEAVDLLT 661

Query: 595 AMLQAGLRPNVPTCNSLLSAFLR 617
            + + GL P+  T  +++SAF R
Sbjct: 662 DLRRQGLTPDAQTYLTVISAFQR 684



 Score =  140 bits (353), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 90/333 (27%), Positives = 151/333 (45%), Gaps = 14/333 (4%)

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
           + GF     TY  ++    +  ++     LL QM+ +    +V++Y+ +I + GR     
Sbjct: 245 EQGFPPSTRTYNPVIDACAKGGRWLEAMDLLGQMLTNDIPADVISYSSVIAACGRGRRWK 304

Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
           EA+D+ +QM+  G  P+ ++Y + ID  AK      A+D+ ++M   GL P   +Y+   
Sbjct: 305 EAMDLLEQMRTQGVSPNVISYNSAIDACAKGDRWKEALDLLREMTTVGLVPTVISYNSAT 364

Query: 473 NCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFE 532
                 G    A +L  EM  QG  PN ++YN  +   AK   ++ A+KL R M   G +
Sbjct: 365 AACAVNGRWVEALELLKEMPAQGIAPNTISYNSALDACAKGGQWEKAVKLLRGMSTVGSD 424

Query: 533 PDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEW 592
           PD ++++  ++  G     + A  +  EM      P+   Y   ++  G++   ++A   
Sbjct: 425 PDIISFNSAIDACGRGQQWETAVELLREMPTAGLTPNVITYNSAIEACGRSARWQEAMGL 484

Query: 593 YEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTE 652
           +  M   GL PNV T NS++ A  +  Q   A  LL GM   G+ P + +Y   +  C +
Sbjct: 485 FREMPTRGLSPNVVTYNSMIDACAKGEQWELAVQLLTGMPARGVAPDVISYNSAIEACGK 544

Query: 653 ARSPYDMGFCHELMAVSGHPAHMFLLSMPSPGP 685
                  G   EL       A   L  MP+ GP
Sbjct: 545 -------GEQWEL-------ALQLLKGMPTRGP 563



 Score =  140 bits (352), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 119/446 (26%), Positives = 184/446 (41%), Gaps = 28/446 (6%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           G   D  TY + +       ++     LL+QMV  G  PN++TYN  I +  +     EA
Sbjct: 177 GITPDVVTYNSAIAACSNGGRWKEAMDLLEQMVAQGVPPNLITYNSAIGACAKGRRWEEA 236

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
           +D+ +++   G  P   TY  +ID  AK G    AMD+  +M    +  D  +YS +I  
Sbjct: 237 MDLLEEVIEQGFPPSTRTYNPVIDACAKGGRWLEAMDLLGQMLTNDIPADVISYSSVIAA 296

Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPD 534
            G+    + A  L  +M  QG  PN+++YN  I   AK   ++ AL L R+M   G  P 
Sbjct: 297 CGRGRRWKEAMDLLEQMRTQGVSPNVISYNSAIDACAKGDRWKEALDLLREMTTVGLVPT 356

Query: 535 KVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYE 594
            ++Y+         G   EA  +  EM  +   P+   Y   +D   K G   KA +   
Sbjct: 357 VISYNSATAACAVNGRWVEALELLKEMPAQGIAPNTISYNSALDACAKGGQWEKAVKLLR 416

Query: 595 AMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTY-TLLLSCCTEA 653
            M   G  P++ + NS + A  R  Q   A  LL+ M   GL P++ TY + + +C   A
Sbjct: 417 GMSTVGSDPDIISFNSAIDACGRGQQWETAVELLREMPTAGLTPNVITYNSAIEACGRSA 476

Query: 654 RSPYDMGFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRESKRGLV 713
           R    MG   E+      P  +   SM      G+     V     M         RG+ 
Sbjct: 477 RWQEAMGLFREMPTRGLSPNVVTYNSMIDACAKGEQWELAVQLLTGM-------PARGVA 529

Query: 714 DAVVDF---LHKSGLKEEAGSVWEVAAQKNVYPDAVKEKGMSYWLINLHVMSDGTAVIAL 770
             V+ +   +   G  E+    WE+A Q          KGM        ++S  +AV A 
Sbjct: 530 PDVISYNSAIEACGKGEQ----WELALQ--------LLKGMPTRGPKPDIISYNSAVTAC 577

Query: 771 SRTLAW-----FRKQMLISGVGPSRI 791
           +++  W       K M   G+ P+ +
Sbjct: 578 AKSGRWREALGLLKDMATVGLTPNTV 603



 Score =  133 bits (334), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 78/272 (28%), Positives = 132/272 (48%)

Query: 381 KLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIH 440
           +LL +M   G  PN ++YN  + +  +     +A+ + + M  VG +PD +++ + ID  
Sbjct: 378 ELLKEMPAQGIAPNTISYNSALDACAKGGQWEKAVKLLRGMSTVGSDPDIISFNSAIDAC 437

Query: 441 AKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNL 500
            +    + A+++ ++M  AGL+P+  TY+  I   G++   Q A  LF EM  +G  PN+
Sbjct: 438 GRGQQWETAVELLREMPTAGLTPNVITYNSAIEACGRSARWQEAMGLFREMPTRGLSPNV 497

Query: 501 VTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAE 560
           VTYN MI   AK   ++ A++L   M   G  PD ++Y+  +E  G     + A  +   
Sbjct: 498 VTYNSMIDACAKGEQWELAVQLLTGMPARGVAPDVISYNSAIEACGKGEQWELALQLLKG 557

Query: 561 MRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQ 620
           M  +   PD   Y   V    K+G  R+A    + M   GL PN  +  + + A  +  Q
Sbjct: 558 MPTRGPKPDIISYNSAVTACAKSGRWREALGLLKDMATVGLTPNTVSYGAAIHACGKGEQ 617

Query: 621 LSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTE 652
              A  +L+ M   G  P+L TY+  +  C +
Sbjct: 618 WDVAVRILKEMQTHGATPNLITYSAAIDACAK 649



 Score =  130 bits (328), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 76/294 (25%), Positives = 137/294 (46%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           G   +  +Y + +    +  Q+    KLL  M   G  P+++++N  I + GR      A
Sbjct: 387 GIAPNTISYNSALDACAKGGQWEKAVKLLRGMSTVGSDPDIISFNSAIDACGRGQQWETA 446

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
           +++ ++M   G  P+ +TY + I+   ++     AM ++++M   GLSP+  TY+ +I+ 
Sbjct: 447 VELLREMPTAGLTPNVITYNSAIEACGRSARWQEAMGLFREMPTRGLSPNVVTYNSMIDA 506

Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPD 534
             K    + A QL   M  +G  P++++YN  I    K   ++ AL+L + M   G +PD
Sbjct: 507 CAKGEQWELAVQLLTGMPARGVAPDVISYNSAIEACGKGEQWELALQLLKGMPTRGPKPD 566

Query: 535 KVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYE 594
            ++Y+  +      G   EA  +  +M      P+   YG  +   GK      A    +
Sbjct: 567 IISYNSAVTACAKSGRWREALGLLKDMATVGLTPNTVSYGAAIHACGKGEQWDVAVRILK 626

Query: 595 AMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
            M   G  PN+ T ++ + A  + G+  +A  LL  +   GL P  QTY  ++S
Sbjct: 627 EMQTHGATPNLITYSAAIDACAKQGRWKEAVDLLTDLRRQGLTPDAQTYLTVIS 680



 Score =  129 bits (325), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 87/301 (28%), Positives = 134/301 (44%), Gaps = 2/301 (0%)

Query: 354 AGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNE 413
           +G   D  +Y   +      RQ+    +LL +M  +G  P+VVTYN  I +  +     E
Sbjct: 104 SGGSLDTTSYNIAIAACSNGRQWATAVRLLREMPTEGVTPDVVTYNSAIAACSKGGRWKE 163

Query: 414 ALDVFKQM--QVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
           A+D+  QM     G  PD VTY + I   +  G    AMD+ ++M A G+ P+  TY+  
Sbjct: 164 AMDLLTQMVAPTEGITPDVVTYNSAIAACSNGGRWKEAMDLLEQMVAQGVPPNLITYNSA 223

Query: 472 INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF 531
           I    K    + A  L  E++ QG  P+  TYN +I   AK   +  A+ L   M     
Sbjct: 224 IGACAKGRRWEEAMDLLEEVIEQGFPPSTRTYNPVIDACAKGGRWLEAMDLLGQMLTNDI 283

Query: 532 EPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWE 591
             D ++YS V+   G      EA  +  +MR +   P+   Y   +D   K    ++A +
Sbjct: 284 PADVISYSSVIAACGRGRRWKEAMDLLEQMRTQGVSPNVISYNSAIDACAKGDRWKEALD 343

Query: 592 WYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCT 651
               M   GL P V + NS  +A    G+  +A  LL+ M   G+ P+  +Y   L  C 
Sbjct: 344 LLREMTTVGLVPTVISYNSATAACAVNGRWVEALELLKEMPAQGIAPNTISYNSALDACA 403

Query: 652 E 652
           +
Sbjct: 404 K 404



 Score =  123 bits (309), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 79/270 (29%), Positives = 126/270 (46%), Gaps = 2/270 (0%)

Query: 383 LDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAK 442
           LD+    G   +  +YN  I +         A+ + ++M   G  PD VTY + I   +K
Sbjct: 98  LDEFKISGGSLDTTSYNIAIAACSNGRQWATAVRLLREMPTEGVTPDVVTYNSAIAACSK 157

Query: 443 AGFLDVAMDMYKKMQA--AGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNL 500
            G    AMD+  +M A   G++PD  TY+  I      G  + A  L  +MV QG  PNL
Sbjct: 158 GGRWKEAMDLLTQMVAPTEGITPDVVTYNSAIAACSNGGRWKEAMDLLEQMVAQGVPPNL 217

Query: 501 VTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAE 560
           +TYN  I   AK R ++ A+ L  ++   GF P   TY+ V++     G   EA  +  +
Sbjct: 218 ITYNSAIGACAKGRRWEEAMDLLEEVIEQGFPPSTRTYNPVIDACAKGGRWLEAMDLLGQ 277

Query: 561 MRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQ 620
           M   +   D   Y  ++   G+    ++A +  E M   G+ PNV + NS + A  +  +
Sbjct: 278 MLTNDIPADVISYSSVIAACGRGRRWKEAMDLLEQMRTQGVSPNVISYNSAIDACAKGDR 337

Query: 621 LSDAYHLLQGMLNLGLKPSLQTYTLLLSCC 650
             +A  LL+ M  +GL P++ +Y    + C
Sbjct: 338 WKEALDLLREMTTVGLVPTVISYNSATAAC 367



 Score =  113 bits (283), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 62/206 (30%), Positives = 99/206 (48%), Gaps = 1/206 (0%)

Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLI 402
           A+G F  +  + G   +  TY +M+    +  Q+    +LL  M   G  P+V++YN  I
Sbjct: 481 AMGLFREMPTR-GLSPNVVTYNSMIDACAKGEQWELAVQLLTGMPARGVAPDVISYNSAI 539

Query: 403 HSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLS 462
            + G+      AL + K M   G +PD ++Y + +   AK+G    A+ + K M   GL+
Sbjct: 540 EACGKGEQWELALQLLKGMPTRGPKPDIISYNSAVTACAKSGRWREALGLLKDMATVGLT 599

Query: 463 PDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKL 522
           P+T +Y   I+  GK      A ++  EM   G  PNL+TY+  I   AK   ++ A+ L
Sbjct: 600 PNTVSYGAAIHACGKGEQWDVAVRILKEMQTHGATPNLITYSAAIDACAKQGRWKEAVDL 659

Query: 523 YRDMQNAGFEPDKVTYSIVMEVLGHC 548
             D++  G  PD  TY  V+     C
Sbjct: 660 LTDLRRQGLTPDAQTYLTVISAFQRC 685



 Score =  112 bits (280), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 60/220 (27%), Positives = 101/220 (45%)

Query: 354 AGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNE 413
           AG   +  TY + +   GR+ ++     L  +M   G  PNVVTYN +I +  +      
Sbjct: 456 AGLTPNVITYNSAIEACGRSARWQEAMGLFREMPTRGLSPNVVTYNSMIDACAKGEQWEL 515

Query: 414 ALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIIN 473
           A+ +   M   G  PD ++Y + I+   K    ++A+ + K M   G  PD  +Y+  + 
Sbjct: 516 AVQLLTGMPARGVAPDVISYNSAIEACGKGEQWELALQLLKGMPTRGPKPDIISYNSAVT 575

Query: 474 CLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEP 533
              K+G  + A  L  +M   G  PN V+Y   I    K   +  A+++ ++MQ  G  P
Sbjct: 576 ACAKSGRWREALGLLKDMATVGLTPNTVSYGAAIHACGKGEQWDVAVRILKEMQTHGATP 635

Query: 534 DKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVY 573
           + +TYS  ++     G   EA  +  ++RR+   PD   Y
Sbjct: 636 NLITYSAAIDACAKQGRWKEAVDLLTDLRRQGLTPDAQTY 675



 Score = 86.7 bits (213), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 67/297 (22%), Positives = 127/297 (42%), Gaps = 12/297 (4%)

Query: 368 GILGRARQFGAINKL----LDQMVRD------GCQPNVVTYNRLIHSYGRANYLNEALDV 417
           G+ G A + G +++     L+   R       G +P  +   + I    +      AL  
Sbjct: 38  GVSGEATRLGVLSRRGEGSLEPSTRSRGAASRGGKPKSLVKLKSILLEAKGRDWRTALAA 97

Query: 418 FKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGK 477
             + ++ G   D  +Y   I   +       A+ + ++M   G++PD  TY+  I    K
Sbjct: 98  LDEFKISGGSLDTTSYNIAIAACSNGRQWATAVRLLREMPTEGVTPDVVTYNSAIAACSK 157

Query: 478 AGHLQAAHQLFCEMV--NQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDK 535
            G  + A  L  +MV   +G  P++VTYN  IA  +    ++ A+ L   M   G  P+ 
Sbjct: 158 GGRWKEAMDLLTQMVAPTEGITPDVVTYNSAIAACSNGGRWKEAMDLLEQMVAQGVPPNL 217

Query: 536 VTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEA 595
           +TY+  +         +EA  +  E+  + + P    Y  ++D   K G   +A +    
Sbjct: 218 ITYNSAIGACAKGRRWEEAMDLLEEVIEQGFPPSTRTYNPVIDACAKGGRWLEAMDLLGQ 277

Query: 596 MLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTE 652
           ML   +  +V + +S+++A  R  +  +A  LL+ M   G+ P++ +Y   +  C +
Sbjct: 278 MLTNDIPADVISYSSVIAACGRGRRWKEAMDLLEQMRTQGVSPNVISYNSAIDACAK 334



 Score = 77.4 bits (189), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 57/232 (24%), Positives = 101/232 (43%), Gaps = 2/232 (0%)

Query: 425 GCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAA 484
           G +P  +     I + AK      A+    + + +G S DT +Y++ I           A
Sbjct: 70  GGKPKSLVKLKSILLEAKGRDWRTALAALDEFKISGGSLDTTSYNIAIAACSNGRQWATA 129

Query: 485 HQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDM--QNAGFEPDKVTYSIVM 542
            +L  EM  +G  P++VTYN  IA  +K   ++ A+ L   M     G  PD VTY+  +
Sbjct: 130 VRLLREMPTEGVTPDVVTYNSAIAACSKGGRWKEAMDLLTQMVAPTEGITPDVVTYNSAI 189

Query: 543 EVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLR 602
               + G   EA  +  +M  +   P+   Y   +    K     +A +  E +++ G  
Sbjct: 190 AACSNGGRWKEAMDLLEQMVAQGVPPNLITYNSAIGACAKGRRWEEAMDLLEEVIEQGFP 249

Query: 603 PNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEAR 654
           P+  T N ++ A  + G+  +A  LL  ML   +   + +Y+ +++ C   R
Sbjct: 250 PSTRTYNPVIDACAKGGRWLEAMDLLGQMLTNDIPADVISYSSVIAACGRGR 301


>gi|242073534|ref|XP_002446703.1| hypothetical protein SORBIDRAFT_06g020845 [Sorghum bicolor]
 gi|241937886|gb|EES11031.1| hypothetical protein SORBIDRAFT_06g020845 [Sorghum bicolor]
          Length = 802

 Score =  152 bits (385), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 94/322 (29%), Positives = 155/322 (48%), Gaps = 36/322 (11%)

Query: 362 TYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQM 421
           TY  ++  L +A +     +LLD M+ +GC+PN + Y+ LI  + +   ++ A +VF +M
Sbjct: 446 TYGALIDGLCKAHKVVDAQELLDAMLSNGCEPNHIIYDALIDGFCKVGKIDNAQEVFLRM 505

Query: 422 QVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHL 481
              G  P   TY +LID   K   LD+AM +  +M  +  +P+  TY+ +I+ L + G  
Sbjct: 506 SKCGYLPTVHTYTSLIDAMFKDRRLDLAMKVLSQMVESSCTPNVVTYTAMIDGLCRIGEC 565

Query: 482 QAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIV 541
           Q A +L   M  +GC PN+VTY  +I    K+     +L+L+  M   G  P+ VTY ++
Sbjct: 566 QKALKLLSMMEEKGCSPNVVTYTALIDGLGKSGKVDLSLQLFIQMSTKGCAPNYVTYRVL 625

Query: 542 MEVLGHCGYLDEAEAVFAEMRRKNW---------------------------------VP 568
           +      G LDEA ++ +EM++  W                                 VP
Sbjct: 626 INHCCAAGLLDEAHSLLSEMKQTYWPKYLQGYCSVVQGFSKKFIASLGLLEELESHGTVP 685

Query: 569 DEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCN---SLLSAFLRVGQLSDAY 625
             PVYGLL+D + KAG + +A E ++ M++     N+ + +   SL+ A     QL  A+
Sbjct: 686 IAPVYGLLIDNFSKAGRLEEALELHKEMMELSSSLNITSKDMYTSLIQALCLASQLEKAF 745

Query: 626 HLLQGMLNLGLKPSLQTYTLLL 647
            L   +   G+ P L  +  L+
Sbjct: 746 ELYSEITRKGVVPELSVFVCLI 767



 Score =  146 bits (369), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 90/309 (29%), Positives = 148/309 (47%), Gaps = 16/309 (5%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           GF  D  TY+ ++  L  A +      L  +M   G  P+V TY  LI S+ +A  + +A
Sbjct: 283 GFVPDTSTYSKVITFLCEAMKVEKAFLLFQEMKSVGVNPDVYTYTILIDSFCKAGLIEQA 342

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
              F +M+ +GC  + VTY  L+  + KA  L  A D++ +M  AG  P+T TYS +++ 
Sbjct: 343 RSWFDEMRSIGCSANVVTYTALLHAYLKAKQLPQASDIFNRMIDAGCPPNTITYSALVDG 402

Query: 475 LGKAGHLQAAHQLFCEMV----------------NQGCIPNLVTYNIMIALQAKARNYQS 518
           L KAG +Q A +++ +++                     PN+VTY  +I    KA     
Sbjct: 403 LCKAGEIQKACEVYTKLIGTSDNVGSDFYFEGKHTDSIAPNVVTYGALIDGLCKAHKVVD 462

Query: 519 ALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVD 578
           A +L   M + G EP+ + Y  +++     G +D A+ VF  M +  ++P    Y  L+D
Sbjct: 463 AQELLDAMLSNGCEPNHIIYDALIDGFCKVGKIDNAQEVFLRMSKCGYLPTVHTYTSLID 522

Query: 579 LWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKP 638
              K   +  A +    M+++   PNV T  +++    R+G+   A  LL  M   G  P
Sbjct: 523 AMFKDRRLDLAMKVLSQMVESSCTPNVVTYTAMIDGLCRIGECQKALKLLSMMEEKGCSP 582

Query: 639 SLQTYTLLL 647
           ++ TYT L+
Sbjct: 583 NVVTYTALI 591



 Score =  141 bits (355), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 88/318 (27%), Positives = 149/318 (46%), Gaps = 16/318 (5%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           +  G   D +TYT ++    +A          D+M   GC  NVVTY  L+H+Y +A  L
Sbjct: 315 KSVGVNPDVYTYTILIDSFCKAGLIEQARSWFDEMRSIGCSANVVTYTALLHAYLKAKQL 374

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKM--------------- 456
            +A D+F +M   GC P+ +TY  L+D   KAG +  A ++Y K+               
Sbjct: 375 PQASDIFNRMIDAGCPPNTITYSALVDGLCKAGEIQKACEVYTKLIGTSDNVGSDFYFEG 434

Query: 457 -QAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARN 515
                ++P+  TY  +I+ L KA  +  A +L   M++ GC PN + Y+ +I    K   
Sbjct: 435 KHTDSIAPNVVTYGALIDGLCKAHKVVDAQELLDAMLSNGCEPNHIIYDALIDGFCKVGK 494

Query: 516 YQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGL 575
             +A +++  M   G+ P   TY+ +++ +     LD A  V ++M   +  P+   Y  
Sbjct: 495 IDNAQEVFLRMSKCGYLPTVHTYTSLIDAMFKDRRLDLAMKVLSQMVESSCTPNVVTYTA 554

Query: 576 LVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLG 635
           ++D   + G  +KA +    M + G  PNV T  +L+    + G++  +  L   M   G
Sbjct: 555 MIDGLCRIGECQKALKLLSMMEEKGCSPNVVTYTALIDGLGKSGKVDLSLQLFIQMSTKG 614

Query: 636 LKPSLQTYTLLLSCCTEA 653
             P+  TY +L++ C  A
Sbjct: 615 CAPNYVTYRVLINHCCAA 632



 Score =  129 bits (324), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 79/287 (27%), Positives = 141/287 (49%), Gaps = 5/287 (1%)

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
           + G+    HTYT+++  + + R+     K+L QMV   C PNVVTY  +I    R     
Sbjct: 507 KCGYLPTVHTYTSLIDAMFKDRRLDLAMKVLSQMVESSCTPNVVTYTAMIDGLCRIGECQ 566

Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
           +AL +   M+  GC P+ VTY  LID   K+G +D+++ ++ +M   G +P+  TY V+I
Sbjct: 567 KALKLLSMMEEKGCSPNVVTYTALIDGLGKSGKVDLSLQLFIQMSTKGCAPNYVTYRVLI 626

Query: 473 NCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFE 532
           N    AG L  AH L  EM        L  Y  ++  Q  ++ + ++L L  ++++ G  
Sbjct: 627 NHCCAAGLLDEAHSLLSEMKQTYWPKYLQGYCSVV--QGFSKKFIASLGLLEELESHGTV 684

Query: 533 PDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNW---VPDEPVYGLLVDLWGKAGNVRKA 589
           P    Y ++++     G L+EA  +  EM   +    +  + +Y  L+     A  + KA
Sbjct: 685 PIAPVYGLLIDNFSKAGRLEEALELHKEMMELSSSLNITSKDMYTSLIQALCLASQLEKA 744

Query: 590 WEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGL 636
           +E Y  + + G+ P +     L+   ++V + ++A  L   + + G+
Sbjct: 745 FELYSEITRKGVVPELSVFVCLIKGLIKVNKWNEALQLCYSICDEGV 791



 Score =  125 bits (314), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 96/375 (25%), Positives = 160/375 (42%), Gaps = 68/375 (18%)

Query: 341 TVALGFFN-----WLRR------QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRD 389
           T+  GF       W +R      + G   +   + ++V     AR +    KLL +M   
Sbjct: 147 TLLTGFLKKKQLGWCKRIINMMMKEGCNPNPSLFNSLVHSYCNARDYPYAYKLLKRMADC 206

Query: 390 GCQPNVVTYNRLIHSY--------------------------------GRANY------- 410
           GC P  V YN  I S                                   AN+       
Sbjct: 207 GCPPGYVAYNIFIGSICGGEELPSPDLLALAEKVYEEMLASSCVLNKVNTANFARCLCGM 266

Query: 411 --LNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTY 468
              + A  + K M   G  PD  TY  +I    +A  ++ A  ++++M++ G++PD +TY
Sbjct: 267 GKFDMAFQIIKVMMGKGFVPDTSTYSKVITFLCEAMKVEKAFLLFQEMKSVGVNPDVYTY 326

Query: 469 SVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQN 528
           +++I+   KAG ++ A   F EM + GC  N+VTY  ++    KA+    A  ++  M +
Sbjct: 327 TILIDSFCKAGLIEQARSWFDEMRSIGCSANVVTYTALLHAYLKAKQLPQASDIFNRMID 386

Query: 529 AGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEM----------------RRKNWVPDEPV 572
           AG  P+ +TYS +++ L   G + +A  V+ ++                   +  P+   
Sbjct: 387 AGCPPNTITYSALVDGLCKAGEIQKACEVYTKLIGTSDNVGSDFYFEGKHTDSIAPNVVT 446

Query: 573 YGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGML 632
           YG L+D   KA  V  A E  +AML  G  PN    ++L+  F +VG++ +A  +   M 
Sbjct: 447 YGALIDGLCKAHKVVDAQELLDAMLSNGCEPNHIIYDALIDGFCKVGKIDNAQEVFLRMS 506

Query: 633 NLGLKPSLQTYTLLL 647
             G  P++ TYT L+
Sbjct: 507 KCGYLPTVHTYTSLI 521



 Score =  123 bits (309), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 81/289 (28%), Positives = 141/289 (48%), Gaps = 16/289 (5%)

Query: 375 QFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYC 434
           +F    +++  M+  G  P+  TY+++I     A  + +A  +F++M+ VG  PD  TY 
Sbjct: 268 KFDMAFQIIKVMMGKGFVPDTSTYSKVITFLCEAMKVEKAFLLFQEMKSVGVNPDVYTYT 327

Query: 435 TLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQ 494
            LID   KAG ++ A   + +M++ G S +  TY+ +++   KA  L  A  +F  M++ 
Sbjct: 328 ILIDSFCKAGLIEQARSWFDEMRSIGCSANVVTYTALLHAYLKAKQLPQASDIFNRMIDA 387

Query: 495 GCIPNLVTYNIMIALQAKARNYQSALKLYRDM----QNAG----FE--------PDKVTY 538
           GC PN +TY+ ++    KA   Q A ++Y  +     N G    FE        P+ VTY
Sbjct: 388 GCPPNTITYSALVDGLCKAGEIQKACEVYTKLIGTSDNVGSDFYFEGKHTDSIAPNVVTY 447

Query: 539 SIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQ 598
             +++ L     + +A+ +   M      P+  +Y  L+D + K G +  A E +  M +
Sbjct: 448 GALIDGLCKAHKVVDAQELLDAMLSNGCEPNHIIYDALIDGFCKVGKIDNAQEVFLRMSK 507

Query: 599 AGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
            G  P V T  SL+ A  +  +L  A  +L  M+     P++ TYT ++
Sbjct: 508 CGYLPTVHTYTSLIDAMFKDRRLDLAMKVLSQMVESSCTPNVVTYTAMI 556



 Score = 92.4 bits (228), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 77/302 (25%), Positives = 130/302 (43%), Gaps = 11/302 (3%)

Query: 353 QAGFKHDEHTYTTMVGILGRAR-QFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           ++GF  D+ T    VG   +A  + G  +  L  + R+  + + V   ++I     A+  
Sbjct: 68  ESGFCMDKFT----VGCFAQALCKEGRWSDALVMIEREDFKLDTVLCTQMISGLMEASLF 123

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
           +EA+    +M+   C P+ VTY TL+    K   L     +   M   G +P+   ++ +
Sbjct: 124 DEAISFLHRMRCNSCIPNVVTYRTLLTGFLKKKQLGWCKRIINMMMKEGCNPNPSLFNSL 183

Query: 472 INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQS------ALKLYRD 525
           ++    A     A++L   M + GC P  V YNI I          S      A K+Y +
Sbjct: 184 VHSYCNARDYPYAYKLLKRMADCGCPPGYVAYNIFIGSICGGEELPSPDLLALAEKVYEE 243

Query: 526 MQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGN 585
           M  +    +KV  +     L   G  D A  +   M  K +VPD   Y  ++    +A  
Sbjct: 244 MLASSCVLNKVNTANFARCLCGMGKFDMAFQIIKVMMGKGFVPDTSTYSKVITFLCEAMK 303

Query: 586 VRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTL 645
           V KA+  ++ M   G+ P+V T   L+ +F + G +  A      M ++G   ++ TYT 
Sbjct: 304 VEKAFLLFQEMKSVGVNPDVYTYTILIDSFCKAGLIEQARSWFDEMRSIGCSANVVTYTA 363

Query: 646 LL 647
           LL
Sbjct: 364 LL 365



 Score = 79.0 bits (193), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 76/320 (23%), Positives = 129/320 (40%), Gaps = 45/320 (14%)

Query: 384 DQMVRD-GCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQ---------VVGC------- 426
           D  ++D G +P+  TYN L+     A  ++    V K+M           VGC       
Sbjct: 28  DPELKDFGYRPSGATYNALVQVLATAGQMDMGFRVQKEMSESGFCMDKFTVGCFAQALCK 87

Query: 427 ----------------EPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSV 470
                           + D V    +I    +A   D A+    +M+     P+  TY  
Sbjct: 88  EGRWSDALVMIEREDFKLDTVLCTQMISGLMEASLFDEAISFLHRMRCNSCIPNVVTYRT 147

Query: 471 IINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAG 530
           ++    K   L    ++   M+ +GC PN   +N ++     AR+Y  A KL + M + G
Sbjct: 148 LLTGFLKKKQLGWCKRIINMMMKEGCNPNPSLFNSLVHSYCNARDYPYAYKLLKRMADCG 207

Query: 531 FEPDKVTYSIVM------EVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAG 584
             P  V Y+I +      E L     L  AE V+ EM   + V ++             G
Sbjct: 208 CPPGYVAYNIFIGSICGGEELPSPDLLALAEKVYEEMLASSCVLNKVNTANFARCLCGMG 267

Query: 585 NVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYT 644
               A++  + M+  G  P+  T + +++      ++  A+ L Q M ++G+ P + TYT
Sbjct: 268 KFDMAFQIIKVMMGKGFVPDTSTYSKVITFLCEAMKVEKAFLLFQEMKSVGVNPDVYTYT 327

Query: 645 LLL-SCCT-----EARSPYD 658
           +L+ S C      +ARS +D
Sbjct: 328 ILIDSFCKAGLIEQARSWFD 347


>gi|326501502|dbj|BAK02540.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 673

 Score =  152 bits (385), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 91/318 (28%), Positives = 150/318 (47%)

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
           + G   DE TY+ +V    RA ++ +   LL +M  DG +P+   ++R++  +       
Sbjct: 332 ECGVAPDEATYSLLVDAYTRAGRWESARILLKEMEADGVKPSSYVFSRILAGFRDRGDWQ 391

Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
           +A  V ++M   G +PDR  Y  +ID   K   L  AMD++ +M+  G+ PD  T++ +I
Sbjct: 392 KAFAVLREMHASGVQPDRHFYNVMIDTFGKYNCLGHAMDVFNRMRGEGIEPDVVTWNTLI 451

Query: 473 NCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFE 532
           +   K G    A +LF EM    C P   TYNIMI L  +   +     +  +M+  G  
Sbjct: 452 DAHCKGGRHDCAMELFKEMRESNCPPGTTTYNIMINLLGEQERWVGVETMMSEMKEQGLV 511

Query: 533 PDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEW 592
           P+ +TY+ +++V G  G   EA      M+     P   +Y  LV+ + + G    A   
Sbjct: 512 PNIITYTTLVDVYGRSGRYKEAIDCIEAMKADGLKPSPTMYHALVNAYAQRGLADHALNV 571

Query: 593 YEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTE 652
            +AM   GL  +    NSL++AF    ++ +A+ +LQ M     +P + TYT L+     
Sbjct: 572 VKAMRADGLEASTVVLNSLINAFGEDRRVVEAFSVLQFMKENDFRPDVITYTTLMKALIR 631

Query: 653 ARSPYDMGFCHELMAVSG 670
                 +   +E M  SG
Sbjct: 632 VEQFDKVPVIYEEMITSG 649



 Score =  149 bits (375), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 82/268 (30%), Positives = 135/268 (50%)

Query: 382 LLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHA 441
           +L +M   G QP+   YN +I ++G+ N L  A+DVF +M+  G EPD VT+ TLID H 
Sbjct: 396 VLREMHASGVQPDRHFYNVMIDTFGKYNCLGHAMDVFNRMRGEGIEPDVVTWNTLIDAHC 455

Query: 442 KAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLV 501
           K G  D AM+++K+M+ +   P T TY+++IN LG+         +  EM  QG +PN++
Sbjct: 456 KGGRHDCAMELFKEMRESNCPPGTTTYNIMINLLGEQERWVGVETMMSEMKEQGLVPNII 515

Query: 502 TYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEM 561
           TY  ++ +  ++  Y+ A+     M+  G +P    Y  ++      G  D A  V   M
Sbjct: 516 TYTTLVDVYGRSGRYKEAIDCIEAMKADGLKPSPTMYHALVNAYAQRGLADHALNVVKAM 575

Query: 562 RRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQL 621
           R         V   L++ +G+   V +A+   + M +   RP+V T  +L+ A +RV Q 
Sbjct: 576 RADGLEASTVVLNSLINAFGEDRRVVEAFSVLQFMKENDFRPDVITYTTLMKALIRVEQF 635

Query: 622 SDAYHLLQGMLNLGLKPSLQTYTLLLSC 649
                + + M+  G  P  +   +L S 
Sbjct: 636 DKVPVIYEEMITSGCAPDRKARAMLRSA 663



 Score =  132 bits (332), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 106/430 (24%), Positives = 185/430 (43%), Gaps = 59/430 (13%)

Query: 367 VGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGC 426
           +GI GR  +  A+   L+  +    +P    YN L+  Y +   L  A  V  +M   G 
Sbjct: 278 LGIAGRVPEAEAL--FLEFFLAGEIKPRTRAYNALLKGYVKIGSLKNAEHVLDEMSECGV 335

Query: 427 EPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQ 486
            PD  TY  L+D + +AG  + A  + K+M+A G+ P ++ +S I+      G  Q A  
Sbjct: 336 APDEATYSLLVDAYTRAGRWESARILLKEMEADGVKPSSYVFSRILAGFRDRGDWQKAFA 395

Query: 487 LFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLG 546
           +  EM   G  P+   YN+MI    K      A+ ++  M+  G EPD VT++ +++   
Sbjct: 396 VLREMHASGVQPDRHFYNVMIDTFGKYNCLGHAMDVFNRMRGEGIEPDVVTWNTLID--A 453

Query: 547 HC--GYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAML----QAG 600
           HC  G  D A  +F EMR  N  P    Y ++++L G+    ++ W   E M+    + G
Sbjct: 454 HCKGGRHDCAMELFKEMRESNCPPGTTTYNIMINLLGE----QERWVGVETMMSEMKEQG 509

Query: 601 LRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMG 660
           L PN+ T  +L+  + R G+  +A   ++ M   GLKPS   Y  L++   +        
Sbjct: 510 LVPNIITYTTLVDVYGRSGRYKEAIDCIEAMKADGLKPSPTMYHALVNAYAQ-------- 561

Query: 661 FCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRESKRGLVDAVVDFL 720
                                      + + DH  + ++ M ++  E+   +++++++  
Sbjct: 562 ---------------------------RGLADHALNVVKAMRADGLEASTVVLNSLINAF 594

Query: 721 HKSGLKEEAGSVWEVAAQKNVYPDAVKEKGMSYWLINLHVMSDGTAVIALSRTLAWFRKQ 780
            +     EA SV +   + +  PD +    +   LI +    D   VI          ++
Sbjct: 595 GEDRRVVEAFSVLQFMKENDFRPDVITYTTLMKALIRVEQF-DKVPVI---------YEE 644

Query: 781 MLISGVGPSR 790
           M+ SG  P R
Sbjct: 645 MITSGCAPDR 654



 Score =  106 bits (265), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 76/307 (24%), Positives = 138/307 (44%), Gaps = 4/307 (1%)

Query: 350 LRRQAGFKHDEHTYTTMVGILGRARQ---FGAINKLLDQMVRDGCQPNVVTYNRLIHSYG 406
           L R+  F  D  +Y+ ++  L   R       + +LL  +     +P+   ++ LI ++ 
Sbjct: 185 LIREHNFLPDLASYSHLLASLLNTRDPPDAAILERLLGDLRDSRLEPDAPLFSDLISAFA 244

Query: 407 RANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAG-LSPDT 465
           RA   + AL++    Q +G  P       LI     AG +  A  ++ +   AG + P T
Sbjct: 245 RAALPDAALELLASAQAIGLTPRSNAVTALISALGIAGRVPEAEALFLEFFLAGEIKPRT 304

Query: 466 FTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRD 525
             Y+ ++    K G L+ A  +  EM   G  P+  TY++++    +A  ++SA  L ++
Sbjct: 305 RAYNALLKGYVKIGSLKNAEHVLDEMSECGVAPDEATYSLLVDAYTRAGRWESARILLKE 364

Query: 526 MQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGN 585
           M+  G +P    +S ++      G   +A AV  EM      PD   Y +++D +GK   
Sbjct: 365 MEADGVKPSSYVFSRILAGFRDRGDWQKAFAVLREMHASGVQPDRHFYNVMIDTFGKYNC 424

Query: 586 VRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTL 645
           +  A + +  M   G+ P+V T N+L+ A  + G+   A  L + M      P   TY +
Sbjct: 425 LGHAMDVFNRMRGEGIEPDVVTWNTLIDAHCKGGRHDCAMELFKEMRESNCPPGTTTYNI 484

Query: 646 LLSCCTE 652
           +++   E
Sbjct: 485 MINLLGE 491



 Score =  100 bits (248), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 83/377 (22%), Positives = 156/377 (41%), Gaps = 53/377 (14%)

Query: 237 VQPRSKAHSNRLNSNFKSNLQPSDAKVVECVSERFSKPSREMKIPAGLAPFSRHFASTGN 296
           ++PR++A+    N+  K  ++    K  E V +  S+         G+AP     A+   
Sbjct: 300 IKPRTRAY----NALLKGYVKIGSLKNAEHVLDEMSE--------CGVAPDE---ATYSL 344

Query: 297 VVESVSRILRQWKWGPLAEEALGNTNYSMDAYQANQVLKQLQDHTVALGFFNWLRRQ--A 354
           +V++ +R  R W+   +  + +        +Y  +++L   +D       F  LR    +
Sbjct: 345 LVDAYTRAGR-WESARILLKEMEADGVKPSSYVFSRILAGFRDRGDWQKAFAVLREMHAS 403

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           G + D H Y  M+   G+    G    + ++M  +G +P+VVT+N LI ++ +    + A
Sbjct: 404 GVQPDRHFYNVMIDTFGKYNCLGHAMDVFNRMRGEGIEPDVVTWNTLIDAHCKGGRHDCA 463

Query: 415 LDVFKQMQVVGCEP-----------------------------------DRVTYCTLIDI 439
           +++FK+M+   C P                                   + +TY TL+D+
Sbjct: 464 MELFKEMRESNCPPGTTTYNIMINLLGEQERWVGVETMMSEMKEQGLVPNIITYTTLVDV 523

Query: 440 HAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPN 499
           + ++G    A+D  + M+A GL P    Y  ++N   + G    A  +   M   G   +
Sbjct: 524 YGRSGRYKEAIDCIEAMKADGLKPSPTMYHALVNAYAQRGLADHALNVVKAMRADGLEAS 583

Query: 500 LVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFA 559
            V  N +I    + R    A  + + M+   F PD +TY+ +M+ L      D+   ++ 
Sbjct: 584 TVVLNSLINAFGEDRRVVEAFSVLQFMKENDFRPDVITYTTLMKALIRVEQFDKVPVIYE 643

Query: 560 EMRRKNWVPDEPVYGLL 576
           EM      PD     +L
Sbjct: 644 EMITSGCAPDRKARAML 660



 Score = 99.8 bits (247), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 51/206 (24%), Positives = 98/206 (47%), Gaps = 1/206 (0%)

Query: 340 HTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYN 399
           H  A+  F  +R ++       TY  M+ +LG   ++  +  ++ +M   G  PN++TY 
Sbjct: 460 HDCAMELFKEMR-ESNCPPGTTTYNIMINLLGEQERWVGVETMMSEMKEQGLVPNIITYT 518

Query: 400 RLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAA 459
            L+  YGR+    EA+D  + M+  G +P    Y  L++ +A+ G  D A+++ K M+A 
Sbjct: 519 TLVDVYGRSGRYKEAIDCIEAMKADGLKPSPTMYHALVNAYAQRGLADHALNVVKAMRAD 578

Query: 460 GLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSA 519
           GL   T   + +IN  G+   +  A  +   M      P+++TY  ++    +   +   
Sbjct: 579 GLEASTVVLNSLINAFGEDRRVVEAFSVLQFMKENDFRPDVITYTTLMKALIRVEQFDKV 638

Query: 520 LKLYRDMQNAGFEPDKVTYSIVMEVL 545
             +Y +M  +G  PD+   +++   L
Sbjct: 639 PVIYEEMITSGCAPDRKARAMLRSAL 664



 Score = 67.0 bits (162), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 59/265 (22%), Positives = 105/265 (39%), Gaps = 4/265 (1%)

Query: 486 QLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYR---DMQNAGFEPDKVTYSIVM 542
           +L   +     +P+L +Y+ ++A     R+   A  L R   D++++  EPD   +S ++
Sbjct: 181 RLLALIREHNFLPDLASYSHLLASLLNTRDPPDAAILERLLGDLRDSRLEPDAPLFSDLI 240

Query: 543 EVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAG-L 601
                    D A  + A  +     P       L+   G AG V +A   +     AG +
Sbjct: 241 SAFARAALPDAALELLASAQAIGLTPRSNAVTALISALGIAGRVPEAEALFLEFFLAGEI 300

Query: 602 RPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGF 661
           +P     N+LL  ++++G L +A H+L  M   G+ P   TY+LL+   T A        
Sbjct: 301 KPRTRAYNALLKGYVKIGSLKNAEHVLDEMSECGVAPDEATYSLLVDAYTRAGRWESARI 360

Query: 662 CHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRESKRGLVDAVVDFLH 721
             + M   G     ++ S    G   +       + L  MH+   +  R   + ++D   
Sbjct: 361 LLKEMEADGVKPSSYVFSRILAGFRDRGDWQKAFAVLREMHASGVQPDRHFYNVMIDTFG 420

Query: 722 KSGLKEEAGSVWEVAAQKNVYPDAV 746
           K      A  V+     + + PD V
Sbjct: 421 KYNCLGHAMDVFNRMRGEGIEPDVV 445



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 37/168 (22%), Positives = 70/168 (41%), Gaps = 35/168 (20%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           ++ G   +  TYTT+V + GR+ ++      ++ M  DG +P+   Y+ L+++Y +    
Sbjct: 506 KEQGLVPNIITYTTLVDVYGRSGRYKEAIDCIEAMKADGLKPSPTMYHALVNAYAQRGLA 565

Query: 412 NEALDVFKQMQVVGCE-----------------------------------PDRVTYCTL 436
           + AL+V K M+  G E                                   PD +TY TL
Sbjct: 566 DHALNVVKAMRADGLEASTVVLNSLINAFGEDRRVVEAFSVLQFMKENDFRPDVITYTTL 625

Query: 437 IDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAA 484
           +    +    D    +Y++M  +G +PD    +++ + L    H + A
Sbjct: 626 MKALIRVEQFDKVPVIYEEMITSGCAPDRKARAMLRSALRYMKHTRVA 673


>gi|15242446|ref|NP_198787.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75170916|sp|Q9FIX3.1|PP407_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g39710; AltName: Full=Protein EMBRYO DEFECTIVE 2745
 gi|10177971|dbj|BAB11377.1| unnamed protein product [Arabidopsis thaliana]
 gi|332007083|gb|AED94466.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 747

 Score =  152 bits (385), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 113/396 (28%), Positives = 192/396 (48%), Gaps = 21/396 (5%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           G+  DE TY T++    +   F     +  +M+R G  P+V+TY  LIHS  +A  +N A
Sbjct: 305 GYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRA 364

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
           ++   QM+V G  P+  TY TL+D  ++ G+++ A  + ++M   G SP   TY+ +IN 
Sbjct: 365 MEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALING 424

Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPD 534
               G ++ A  +  +M  +G  P++V+Y+ +++   ++ +   AL++ R+M   G +PD
Sbjct: 425 HCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPD 484

Query: 535 KVTYSIVMEVLGHCGYLDEAEA--VFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEW 592
            +TYS +++  G C      EA  ++ EM R    PDE  Y  L++ +   G++ KA + 
Sbjct: 485 TITYSSLIQ--GFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQL 542

Query: 593 YEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCT- 651
           +  M++ G+ P+V T + L++   +  +  +A  LL  +      PS  TY  L+  C+ 
Sbjct: 543 HNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSN 602

Query: 652 -EARSPYDM--GFCHELMAVSGHPAHMFLLSMPSPGPDGQ--NVRDH----VGSFLEMMH 702
            E +S   +  GFC + M          +L   +  PDG   N+  H     G   +   
Sbjct: 603 IEFKSVVSLIKGFCMKGMMTEADQVFESMLG-KNHKPDGTAYNIMIHGHCRAGDIRKAYT 661

Query: 703 SEDRESKRGL------VDAVVDFLHKSGLKEEAGSV 732
                 K G       V A+V  LHK G   E  SV
Sbjct: 662 LYKEMVKSGFLLHTVTVIALVKALHKEGKVNELNSV 697



 Score =  150 bits (378), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 87/289 (30%), Positives = 143/289 (49%), Gaps = 11/289 (3%)

Query: 374 RQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTY 433
           R       +  +M+     PNV TYN LI  +  A  ++ AL +F +M+  GC P+ VTY
Sbjct: 184 RNISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTY 243

Query: 434 CTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVN 493
            TLID + K   +D    + + M   GL P+  +Y+V+IN L + G ++    +  EM  
Sbjct: 244 NTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNR 303

Query: 494 QGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDE 553
           +G   + VTYN +I    K  N+  AL ++ +M   G  P  +TY+ ++  +   G ++ 
Sbjct: 304 RGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNR 363

Query: 554 AEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLS 613
           A     +MR +   P+E  Y  LVD + + G + +A+     M   G  P+V T N+L++
Sbjct: 364 AMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALIN 423

Query: 614 AFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGFC 662
                G++ DA  +L+ M   GL P + +Y+ +LS           GFC
Sbjct: 424 GHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLS-----------GFC 461



 Score =  149 bits (376), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 100/339 (29%), Positives = 162/339 (47%), Gaps = 24/339 (7%)

Query: 330 ANQVLKQLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAIN--------K 381
           +N +LK   D  + L F NW      F       T  + IL + + +            K
Sbjct: 52  SNLLLKSQNDQALILKFLNWANPHQFFTLRCKCIT--LHILTKFKLYKTAQILAEDVAAK 109

Query: 382 LLD-----------QMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDR 430
            LD           Q   D C      ++ ++ SY R + +++AL +    Q  G  P  
Sbjct: 110 TLDDEYASLVFKSLQETYDLCYSTSSVFDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGV 169

Query: 431 VTYCTLID--IHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLF 488
           ++Y  ++D  I +K   +  A +++K+M  + +SP+ FTY+++I     AG++  A  LF
Sbjct: 170 LSYNAVLDATIRSKRN-ISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLF 228

Query: 489 CEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHC 548
            +M  +GC+PN+VTYN +I    K R      KL R M   G EP+ ++Y++V+  L   
Sbjct: 229 DKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCRE 288

Query: 549 GYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTC 608
           G + E   V  EM R+ +  DE  Y  L+  + K GN  +A   +  ML+ GL P+V T 
Sbjct: 289 GRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITY 348

Query: 609 NSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
            SL+ +  + G ++ A   L  M   GL P+ +TYT L+
Sbjct: 349 TSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLV 387



 Score =  148 bits (374), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 104/362 (28%), Positives = 177/362 (48%), Gaps = 13/362 (3%)

Query: 289 RHFASTGNVVESVSRILRQWKWGPLAEEALGNTNYSMDAYQANQVLKQLQDHTVALGFFN 348
           R F   GN+  +++   +    G L      NT   +D Y     L+++ D       F 
Sbjct: 213 RGFCFAGNIDVALTLFDKMETKGCLPNVVTYNT--LIDGYCK---LRKIDDG------FK 261

Query: 349 WLRRQA--GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYG 406
            LR  A  G + +  +Y  ++  L R  +   ++ +L +M R G   + VTYN LI  Y 
Sbjct: 262 LLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYC 321

Query: 407 RANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTF 466
           +    ++AL +  +M   G  P  +TY +LI    KAG ++ AM+   +M+  GL P+  
Sbjct: 322 KEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNER 381

Query: 467 TYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDM 526
           TY+ +++   + G++  A+++  EM + G  P++VTYN +I         + A+ +  DM
Sbjct: 382 TYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDM 441

Query: 527 QNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNV 586
           +  G  PD V+YS V+        +DEA  V  EM  K   PD   Y  L+  + +    
Sbjct: 442 KEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRT 501

Query: 587 RKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLL 646
           ++A + YE ML+ GL P+  T  +L++A+   G L  A  L   M+  G+ P + TY++L
Sbjct: 502 KEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVL 561

Query: 647 LS 648
           ++
Sbjct: 562 IN 563



 Score =  145 bits (366), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 117/423 (27%), Positives = 197/423 (46%), Gaps = 24/423 (5%)

Query: 342 VALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRL 401
           VAL  F+ +  + G   +  TY T++    + R+     KLL  M   G +PN+++YN +
Sbjct: 223 VALTLFDKMETK-GCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVV 281

Query: 402 IHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGL 461
           I+   R   + E   V  +M   G   D VTY TLI  + K G    A+ M+ +M   GL
Sbjct: 282 INGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGL 341

Query: 462 SPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALK 521
           +P   TY+ +I+ + KAG++  A +   +M  +G  PN  TY  ++   ++      A +
Sbjct: 342 TPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYR 401

Query: 522 LYRDMQNAGFEPDKVTYSIVMEVLGHC--GYLDEAEAVFAEMRRKNWVPDEPVYGLLVDL 579
           + R+M + GF P  VTY+ ++   GHC  G +++A AV  +M+ K   PD   Y  ++  
Sbjct: 402 VLREMNDNGFSPSVVTYNALIN--GHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSG 459

Query: 580 WGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPS 639
           + ++ +V +A      M++ G++P+  T +SL+  F    +  +A  L + ML +GL P 
Sbjct: 460 FCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPD 519

Query: 640 LQTYTLLLSC-CTEARSPYDMGFCHELMAVSGHPAHMFLLSMPSPGPDGQN-VRDHVGSF 697
             TYT L++  C E      +   H  M   G    +   S+   G + Q+  R+     
Sbjct: 520 EFTYTALINAYCMEGDLEKALQL-HNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLL 578

Query: 698 LEMMHSEDRESK---------------RGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVY 742
           L++ + E   S                + +V  +  F  K G+  EA  V+E    KN  
Sbjct: 579 LKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMK-GMMTEADQVFESMLGKNHK 637

Query: 743 PDA 745
           PD 
Sbjct: 638 PDG 640



 Score =  133 bits (335), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 94/331 (28%), Positives = 157/331 (47%), Gaps = 51/331 (15%)

Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLI 402
           A+ F + +R + G   +E TYTT+V    +        ++L +M  +G  P+VVTYN LI
Sbjct: 364 AMEFLDQMRVR-GLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALI 422

Query: 403 H-----------------------------------SYGRANYLNEALDVFKQMQVVGCE 427
           +                                    + R+  ++EAL V ++M   G +
Sbjct: 423 NGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIK 482

Query: 428 PDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQL 487
           PD +TY +LI    +      A D+Y++M   GL PD FTY+ +IN     G L+ A QL
Sbjct: 483 PDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQL 542

Query: 488 FCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVME---- 543
             EMV +G +P++VTY+++I    K    + A +L   +      P  VTY  ++E    
Sbjct: 543 HNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSN 602

Query: 544 ---------VLGHC--GYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEW 592
                    + G C  G + EA+ VF  M  KN  PD   Y +++    +AG++RKA+  
Sbjct: 603 IEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTL 662

Query: 593 YEAMLQAGLRPNVPTCNSLLSAFLRVGQLSD 623
           Y+ M+++G   +  T  +L+ A  + G++++
Sbjct: 663 YKEMVKSGFLLHTVTVIALVKALHKEGKVNE 693



 Score =  102 bits (254), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 73/303 (24%), Positives = 128/303 (42%), Gaps = 50/303 (16%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           ++ G   D  +Y+T++    R+       ++  +MV  G +P+ +TY+ LI  +      
Sbjct: 442 KEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRT 501

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
            EA D++++M  VG  PD  TY  LI+ +   G L+ A+ ++ +M   G+ PD  TYSV+
Sbjct: 502 KEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVL 561

Query: 472 INCLGK--------------------------------------------------AGHL 481
           IN L K                                                   G +
Sbjct: 562 INGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMM 621

Query: 482 QAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIV 541
             A Q+F  M+ +   P+   YNIMI    +A + + A  LY++M  +GF    VT   +
Sbjct: 622 TEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFLLHTVTVIAL 681

Query: 542 MEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGL 601
           ++ L   G ++E  +V   + R   + +     +LV++  + GN+    +    M + G 
Sbjct: 682 VKALHKEGKVNELNSVIVHVLRSCELSEAEQAKVLVEINHREGNMDVVLDVLAEMAKDGF 741

Query: 602 RPN 604
            PN
Sbjct: 742 LPN 744



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 41/200 (20%), Positives = 82/200 (41%), Gaps = 15/200 (7%)

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANY-- 410
           + G   D  TY+ ++  L +  +     +LL ++  +   P+ VTY+ LI +     +  
Sbjct: 548 EKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKS 607

Query: 411 -------------LNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQ 457
                        + EA  VF+ M     +PD   Y  +I  H +AG +  A  +YK+M 
Sbjct: 608 VVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMV 667

Query: 458 AAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQ 517
            +G    T T   ++  L K G +   + +   ++    +       +++ +  +  N  
Sbjct: 668 KSGFLLHTVTVIALVKALHKEGKVNELNSVIVHVLRSCELSEAEQAKVLVEINHREGNMD 727

Query: 518 SALKLYRDMQNAGFEPDKVT 537
             L +  +M   GF P+ ++
Sbjct: 728 VVLDVLAEMAKDGFLPNGIS 747


>gi|46518447|gb|AAS99705.1| At1g62720 [Arabidopsis thaliana]
          Length = 426

 Score =  152 bits (385), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 93/317 (29%), Positives = 163/317 (51%), Gaps = 24/317 (7%)

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAIN---KLLDQMVRDGCQPNVVTYNRLIHSYGRAN 409
           + GF+ D   Y T   I+  + + G +N   +L D+M RDG + + VTYN L+     + 
Sbjct: 108 EMGFRPDVVIYNT---IIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSG 164

Query: 410 YLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYS 469
             ++A  + + M +    P+ +T+  +ID+  K G    AM +Y++M    + PD FTY+
Sbjct: 165 RWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYN 224

Query: 470 VIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNA 529
            +IN L   G +  A Q+   MV +GC+P++VTYN +I    K++      KL+R+M   
Sbjct: 225 SLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQR 284

Query: 530 GFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGN--VR 587
           G   D +TY+ +++     G  D A+ +F+ M  +   P+   Y +L  L+G   N  V 
Sbjct: 285 GLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDSR---PNIRTYSIL--LYGLCMNWRVE 339

Query: 588 KAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
           KA   +E M ++ +  ++ T N ++    ++G + DA+ L + +   GLKP + +YT ++
Sbjct: 340 KALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMI 399

Query: 648 SCCTEARSPYDMGFCHE 664
           S           GFC +
Sbjct: 400 S-----------GFCRK 405



 Score =  149 bits (375), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 82/294 (27%), Positives = 161/294 (54%), Gaps = 3/294 (1%)

Query: 354 AGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNE 413
            G  HD ++Y  ++  L R  +F     ++ +M++ G +P+VVT + LI+ + + N + +
Sbjct: 39  CGIGHDLYSYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFD 98

Query: 414 ALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIIN 473
           A+D+  +M+ +G  PD V Y T+ID   K G ++ A++++ +M+  G+  D  TY+ ++ 
Sbjct: 99  AIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVA 158

Query: 474 CLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEP 533
            L  +G    A +L  +MV +  +PN++T+  +I +  K   +  A+KLY +M     +P
Sbjct: 159 GLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDP 218

Query: 534 DKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWY 593
           D  TY+ ++  L   G +DEA+ +   M  K  +PD   Y  L++ + K+  V +  + +
Sbjct: 219 DVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLF 278

Query: 594 EAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
             M Q GL  +  T N+++  + + G+   A  +   M +   +P+++TY++LL
Sbjct: 279 REMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDS---RPNIRTYSILL 329



 Score =  117 bits (293), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 79/294 (26%), Positives = 140/294 (47%)

Query: 363 YTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQ 422
           ++ ++  + +++ +  +  L   M   G   ++ +YN +I+   R +    AL V  +M 
Sbjct: 13  FSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSVVGKMM 72

Query: 423 VVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQ 482
             G EPD VT  +LI+   +   +  A+D+  KM+  G  PD   Y+ II+   K G + 
Sbjct: 73  KFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVN 132

Query: 483 AAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVM 542
            A +LF  M   G   + VTYN ++A    +  +  A +L RDM      P+ +T++ V+
Sbjct: 133 DAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVI 192

Query: 543 EVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLR 602
           +V    G   EA  ++ EM R+   PD   Y  L++     G V +A +  + M+  G  
Sbjct: 193 DVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCL 252

Query: 603 PNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSP 656
           P+V T N+L++ F +  ++ +   L + M   GL     TY  ++    +A  P
Sbjct: 253 PDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRP 306



 Score =  107 bits (267), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 65/256 (25%), Positives = 125/256 (48%)

Query: 393 PNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDM 452
           P++V +++++    ++   +  + +F  M+V G   D  +Y  +I+   +     +A+ +
Sbjct: 8   PSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSV 67

Query: 453 YKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAK 512
             KM   G  PD  T S +IN   +   +  A  L  +M   G  P++V YN +I    K
Sbjct: 68  VGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCK 127

Query: 513 ARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPV 572
                 A++L+  M+  G   D VTY+ ++  L   G   +A  +  +M  ++ VP+   
Sbjct: 128 IGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVIT 187

Query: 573 YGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGML 632
           +  ++D++ K G   +A + YE M +  + P+V T NSL++     G++ +A  +L  M+
Sbjct: 188 FTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMV 247

Query: 633 NLGLKPSLQTYTLLLS 648
             G  P + TY  L++
Sbjct: 248 TKGCLPDVVTYNTLIN 263



 Score = 89.7 bits (221), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 56/207 (27%), Positives = 99/207 (47%), Gaps = 32/207 (15%)

Query: 359 DEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVF 418
           D  TY +++  L    +     ++LD MV  GC P+VVTYN LI+ + ++  ++E   +F
Sbjct: 219 DVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLF 278

Query: 419 KQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKM---------------------- 456
           ++M   G   D +TY T+I  + +AG  D A +++ +M                      
Sbjct: 279 REMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDSRPNIRTYSILLYGLCMNWRV 338

Query: 457 ----------QAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIM 506
                     Q + +  D  TY+++I+ + K G+++ A  LF  +  +G  P++V+Y  M
Sbjct: 339 EKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTM 398

Query: 507 IALQAKARNYQSALKLYRDMQNAGFEP 533
           I+   + R +  +  LYR MQ  G  P
Sbjct: 399 ISGFCRKRQWDKSDLLYRKMQEDGLLP 425


>gi|357480939|ref|XP_003610755.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355512090|gb|AES93713.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 596

 Score =  152 bits (385), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 106/392 (27%), Positives = 191/392 (48%), Gaps = 19/392 (4%)

Query: 260 DAKVVECVSERFSKPSREMKIPAGLAPFSRHFASTGNVVESVSRILRQWKWGPLAE--EA 317
           D+ +++   + F+KPS E  I         H       VE +S  L++ +        +A
Sbjct: 121 DSSILQTKPKLFAKPSLEESI---------HLED----VEKISTFLKEQRHSSHDHVVQA 167

Query: 318 LGNTNYSMDAYQANQVLKQL-QDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQF 376
           L  + + +      QVLK+   D   A GFF W ++Q  + H    Y  MV ILG+A++F
Sbjct: 168 LDGSGFRVSNSLVMQVLKRFGNDWVAAYGFFIWAKKQTPYVHSPEVYNLMVDILGKAKEF 227

Query: 377 GAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTL 436
             + KL+ +M R      + T ++++  + +A    +A++ F+ M   G E D      L
Sbjct: 228 DLMWKLVKEMKRIEGYVCLDTMSKVMRRFAKAQRHEDAVEAFRGMGKYGVEKDTAALNKL 287

Query: 437 IDIHAKAGFLDVAMDMYKKMQAA-GLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQG 495
           +D   K   +++A ++  + +++  LS  +F  +++IN   K  + + A ++  E    G
Sbjct: 288 LDALVKGQSIEIAHNVLDEFKSSVPLSSPSF--NILINGWCKVRNFEKARKVMEERKEHG 345

Query: 496 CIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAE 555
             P++ TYN  I      ++++   ++  +M+  G  P+ VTY+I++   G  G L +A 
Sbjct: 346 FEPDVFTYNNFIESYCHDKDFRKVDEVLEEMRGNGCPPNAVTYTILLLGYGKAGQLSKAL 405

Query: 556 AVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAF 615
             +  M++   VPD P Y  L+ + GKAG ++ A E ++ M + G+  +V T N+++S  
Sbjct: 406 EEYERMKKDGIVPDTPFYSSLMYILGKAGRLKDACEVFDDMPKQGVVRDVVTYNTMISTA 465

Query: 616 LRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
               +   A  LL+ M     KP LQTY  LL
Sbjct: 466 CAHSKEETALRLLKEMEETSCKPDLQTYHPLL 497



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 87/333 (26%), Positives = 164/333 (49%), Gaps = 12/333 (3%)

Query: 298 VESVSRILRQWKWGPLAEEA------LGNTNYSMDAYQANQVLKQL---QDHTVALGFFN 348
           ++++S+++R++      E+A      +G      D    N++L  L   Q   +A    +
Sbjct: 246 LDTMSKVMRRFAKAQRHEDAVEAFRGMGKYGVEKDTAALNKLLDALVKGQSIEIAHNVLD 305

Query: 349 WLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRA 408
             +          ++  ++    + R F    K++++    G +P+V TYN  I SY   
Sbjct: 306 EFKSSVPLSSP--SFNILINGWCKVRNFEKARKVMEERKEHGFEPDVFTYNNFIESYCHD 363

Query: 409 NYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTY 468
               +  +V ++M+  GC P+ VTY  L+  + KAG L  A++ Y++M+  G+ PDT  Y
Sbjct: 364 KDFRKVDEVLEEMRGNGCPPNAVTYTILLLGYGKAGQLSKALEEYERMKKDGIVPDTPFY 423

Query: 469 SVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQN 528
           S ++  LGKAG L+ A ++F +M  QG + ++VTYN MI+        ++AL+L ++M+ 
Sbjct: 424 SSLMYILGKAGRLKDACEVFDDMPKQGVVRDVVTYNTMISTACAHSKEETALRLLKEMEE 483

Query: 529 AGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRK 588
              +PD  TY  ++++      +   + +   M + +  PD   Y LLV     +G + +
Sbjct: 484 TSCKPDLQTYHPLLKMCCKKKRMKVLKFLLDHMFKHDLCPDRGTYTLLVQSLSNSGKLVE 543

Query: 589 AWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQL 621
           A  ++E M+  G  P + T   LL+  L +  +
Sbjct: 544 ACTFFEEMVSKGFTP-METTVKLLTRKLEIKSM 575



 Score = 77.4 bits (189), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 54/242 (22%), Positives = 99/242 (40%), Gaps = 35/242 (14%)

Query: 351 RRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANY 410
           R++ GF+ D  TY   +      + F  ++++L++M  +GC PN VTY  L+  YG+A  
Sbjct: 341 RKEHGFEPDVFTYNNFIESYCHDKDFRKVDEVLEEMRGNGCPPNAVTYTILLLGYGKAGQ 400

Query: 411 LNEALDVFKQMQVVGCEPDR-----------------------------------VTYCT 435
           L++AL+ +++M+  G  PD                                    VTY T
Sbjct: 401 LSKALEEYERMKKDGIVPDTPFYSSLMYILGKAGRLKDACEVFDDMPKQGVVRDVVTYNT 460

Query: 436 LIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQG 495
           +I         + A+ + K+M+     PD  TY  ++    K   ++    L   M    
Sbjct: 461 MISTACAHSKEETALRLLKEMEETSCKPDLQTYHPLLKMCCKKKRMKVLKFLLDHMFKHD 520

Query: 496 CIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAE 555
             P+  TY +++   + +     A   + +M + GF P + T  ++   L     L E +
Sbjct: 521 LCPDRGTYTLLVQSLSNSGKLVEACTFFEEMVSKGFTPMETTVKLLTRKLEIKSMLKEKD 580

Query: 556 AV 557
            +
Sbjct: 581 QI 582


>gi|225433712|ref|XP_002266503.1| PREDICTED: pentatricopeptide repeat-containing protein At1g02060,
           chloroplastic-like [Vitis vinifera]
          Length = 746

 Score =  152 bits (385), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 101/362 (27%), Positives = 180/362 (49%), Gaps = 13/362 (3%)

Query: 299 ESVSRILRQWKWGPLAEEALGNTNYSMDAYQANQVLKQLQDHTVALGFFNWLRRQAGFKH 358
           ++++R++    W    + +L     S+      Q L+ ++    AL FF W+  + GF H
Sbjct: 67  QAMARLINTEPWSHELQSSLAELAPSLSKTTVLQTLQLIRTPAKALHFFRWVEAK-GFTH 125

Query: 359 DEHTYTTMVGILGRARQFGAINKLLDQMVRD---GCQPNVVTYNRLIHSYGRANYLNEAL 415
           +E +Y  M+ ILGR+R   A    +  + +      +     +N LI SYG A    E++
Sbjct: 126 NEQSYFLMIEILGRSRNLNAARNFVFSIEKKSGGAVKLGDRFFNSLIRSYGWAGLFQESI 185

Query: 416 DVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKM-QAAGLSPDTFTYSVIINC 474
            VFK M+ +G  P  VT+ +L+ I  K G   +A  ++ +M    G++PDT+T++++I  
Sbjct: 186 KVFKTMKEIGVSPSVVTFNSLLSIVLKRGRTSMAKQLFDEMLDTYGVTPDTYTFNILIRG 245

Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDM--QNAGFE 532
                 +      F EM    C P++VTYN ++    +A   + A  + + M  ++    
Sbjct: 246 FCMNSMVDEGFWFFKEMSRFKCDPDVVTYNTLVDGLCRAGKVKIAHNVVKGMVKKSPNLS 305

Query: 533 PDKVTYSIVMEVLGHCGYLDEAEA--VFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAW 590
           P+ VTY+ ++   G+C   D AEA  + AEM  +   P++  Y  L+    +A  + K  
Sbjct: 306 PNVVTYTTLIR--GYCMKQDMAEALSLLAEMVSRGLKPNKITYNTLIQGLCEAQKLDKIK 363

Query: 591 EWYEAML-QAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL-S 648
           E  E M+   G  P+  T N+L+ A   +G+L +A+ + + M  L ++P   TY++L+ S
Sbjct: 364 EILEGMVGDGGFIPDTCTLNTLIKAHCTMGKLEEAFSVFEKMSELRVQPDSATYSVLVRS 423

Query: 649 CC 650
            C
Sbjct: 424 LC 425



 Score =  125 bits (314), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 84/305 (27%), Positives = 148/305 (48%), Gaps = 15/305 (4%)

Query: 362 TYTTMVGILGRARQFGAINKLLDQMVRD-GCQPNVVTYNRLIHSYGRANYLNEALDVFKQ 420
           T+ +++ I+ +  +     +L D+M+   G  P+  T+N LI  +   + ++E    FK+
Sbjct: 202 TFNSLLSIVLKRGRTSMAKQLFDEMLDTYGVTPDTYTFNILIRGFCMNSMVDEGFWFFKE 261

Query: 421 MQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKM--QAAGLSPDTFTYSVIINCLGKA 478
           M    C+PD VTY TL+D   +AG + +A ++ K M  ++  LSP+  TY+ +I      
Sbjct: 262 MSRFKCDPDVVTYNTLVDGLCRAGKVKIAHNVVKGMVKKSPNLSPNVVTYTTLIRGYCMK 321

Query: 479 GHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDM-QNAGFEPDKVT 537
             +  A  L  EMV++G  PN +TYN +I    +A+      ++   M  + GF PD  T
Sbjct: 322 QDMAEALSLLAEMVSRGLKPNKITYNTLIQGLCEAQKLDKIKEILEGMVGDGGFIPDTCT 381

Query: 538 YSIVMEVLGHC--GYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEA 595
            + +++   HC  G L+EA +VF +M      PD   Y +LV    + G+ R+A E+++ 
Sbjct: 382 LNTLIK--AHCTMGKLEEAFSVFEKMSELRVQPDSATYSVLVRSLCQRGDFRRAEEFFDE 439

Query: 596 MLQ-------AGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
           + +        G +P V   N +       G+   A  + + ++  G +      TL+L 
Sbjct: 440 LAEKEILLHDVGCKPLVAAYNPMFEYLCSNGKTKKAERVFRQLMKRGTQDPPSYKTLILG 499

Query: 649 CCTEA 653
            C E 
Sbjct: 500 HCREG 504



 Score =  119 bits (299), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 86/298 (28%), Positives = 144/298 (48%), Gaps = 15/298 (5%)

Query: 362 TYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQM 421
           TYTT++      +       LL +MV  G +PN +TYN LI     A  L++  ++ + M
Sbjct: 310 TYTTLIRGYCMKQDMAEALSLLAEMVSRGLKPNKITYNTLIQGLCEAQKLDKIKEILEGM 369

Query: 422 -QVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGH 480
               G  PD  T  TLI  H   G L+ A  +++KM    + PD+ TYSV++  L + G 
Sbjct: 370 VGDGGFIPDTCTLNTLIKAHCTMGKLEEAFSVFEKMSELRVQPDSATYSVLVRSLCQRGD 429

Query: 481 LQAAHQLFCEMVNQ-------GCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEP 533
            + A + F E+  +       GC P +  YN M          + A +++R +   G + 
Sbjct: 430 FRRAEEFFDELAEKEILLHDVGCKPLVAAYNPMFEYLCSNGKTKKAERVFRQLMKRGTQ- 488

Query: 534 DKVTYSIVMEVLGHC--GYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWE 591
           D  +Y  +  +LGHC  G  +    +   M R+++VPD   YGL++D   K G+   A +
Sbjct: 489 DPPSYKTL--ILGHCREGTPEAGFDLLVLMLRRDFVPDAETYGLMIDGLLKKGDPVLAHK 546

Query: 592 WYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPS--LQTYTLLL 647
             E ML++   P     +S+L+A +  G   ++  L++ ML   ++ +  L T+T+ L
Sbjct: 547 SLEKMLKSSHLPTTAIFHSILAALVEKGCAHESASLVKLMLERRIRQNIDLSTHTVRL 604



 Score = 89.7 bits (221), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 71/249 (28%), Positives = 121/249 (48%), Gaps = 8/249 (3%)

Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVA----MDMYKKMQAAGLSPDTFTY 468
           +AL  F+ ++  G   +  +Y  +I+I  ++  L+ A      + KK   A    D F +
Sbjct: 110 KALHFFRWVEAKGFTHNEQSYFLMIEILGRSRNLNAARNFVFSIEKKSGGAVKLGDRF-F 168

Query: 469 SVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQN 528
           + +I   G AG  Q + ++F  M   G  P++VT+N ++++  K      A +L+ +M +
Sbjct: 169 NSLIRSYGWAGLFQESIKVFKTMKEIGVSPSVVTFNSLLSIVLKRGRTSMAKQLFDEMLD 228

Query: 529 A-GFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVR 587
             G  PD  T++I++        +DE    F EM R    PD   Y  LVD   +AG V+
Sbjct: 229 TYGVTPDTYTFNILIRGFCMNSMVDEGFWFFKEMSRFKCDPDVVTYNTLVDGLCRAGKVK 288

Query: 588 KAWEWYEAMLQAG--LRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTL 645
            A    + M++    L PNV T  +L+  +     +++A  LL  M++ GLKP+  TY  
Sbjct: 289 IAHNVVKGMVKKSPNLSPNVVTYTTLIRGYCMKQDMAEALSLLAEMVSRGLKPNKITYNT 348

Query: 646 LLSCCTEAR 654
           L+    EA+
Sbjct: 349 LIQGLCEAQ 357


>gi|356557983|ref|XP_003547289.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16390,
           chloroplastic-like [Glycine max]
          Length = 707

 Score =  152 bits (384), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 136/602 (22%), Positives = 255/602 (42%), Gaps = 69/602 (11%)

Query: 282 AGLAPFSRHFASTGNVVESVSRILRQWKWGPLAEEALGNTNYSMDAYQANQVLKQLQDHT 341
           + L   ++   S     + VS ILR           LG+  +  DA     +L  + +  
Sbjct: 111 SSLTKLAKSLDSCNPTQQHVSEILR----------VLGDNVFESDAVV---ILNSMVNPY 157

Query: 342 VALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRL 401
            AL   N+  ++         Y   + +   +R F    KL D+M++ G +PN  T++ +
Sbjct: 158 TALLAVNYFNQKIKPSRHVVLYNVTLKLFRASRDFEGAEKLFDEMLQRGVKPNNFTFSTM 217

Query: 402 IHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGL 461
           +      N  N+ +++F++M   G EPD +T   ++  +A +  +D A+ +Y +  A   
Sbjct: 218 V------NCANKPVELFEKMSGFGYEPDGITCSAMVYAYALSNNVDKAVSLYDRAIAEKW 271

Query: 462 SPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALK 521
             D   +S +I     AG+     +++ EM   G  PN+VTYN ++    KA  ++ A  
Sbjct: 272 CLDAAAFSALIKMYSMAGNYDRCLKIYQEMKVLGVKPNVVTYNTLLGAMLKAEKHRQAKA 331

Query: 522 LYRDMQNAGFEPDKVTYSIVMEV--LGH-------------------------------- 547
           +Y++M++ G  PD +TY+ ++EV  + H                                
Sbjct: 332 IYKEMRSNGVSPDFITYACLLEVYTIAHYSEDALGVYKEMKGNGMDMTADLYNKLLAMYA 391

Query: 548 -CGYLDEAEAVFAEMRRKNWV-PDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNV 605
             GY+D A  +F EM       PD   +  L+ ++ ++G V +A      M+Q+G +P +
Sbjct: 392 DMGYIDRAVEIFYEMNSSGTCQPDSWTFASLIAIYSRSGKVSEAEGMLNEMIQSGFQPTI 451

Query: 606 PTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGFCHEL 665
               SL+  + +  +  D   + + +L LG+ P+      LL+  T+A    ++G   + 
Sbjct: 452 FVLTSLVHCYGKAKRTDDVVKVFKQLLELGIVPNDHFCCSLLNVLTQAPKE-ELGKLTDC 510

Query: 666 MAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRESKRGLVDAVVDFLHKSGL 725
           +  +       +  +     DG + R+ V  FL   +S D E K  L + ++D   K  +
Sbjct: 511 IEKANTKLGSVVKYLVEEEGDG-DFRNEVSEFL---NSIDAEVKMPLCNCLIDLCVKLNV 566

Query: 726 KEEAGSVWEVAAQKNVYPDAVKEKGMSYWLINLHVMSDGTAVIALSRTLAWFRKQMLISG 785
            E A  + ++     +Y + ++ K  + W ++L  +S G A+ AL   +    K +    
Sbjct: 567 PERACDLLDLGLMLEIYKN-IQSKSQTQWSLHLKELSVGAAMTALHVWINDLSKALESGE 625

Query: 786 VGPSRIDIVTGWGRR--SRVTGTSLVRQAVQELLHMFSFPFFTENGNSGCFVGCGEPLNK 843
             P  + I TG G+   S      +    ++EL    + PF      +G F+    P   
Sbjct: 626 DLPPLLGINTGKGKHKYSEKGLAGIFESHLKEL----NAPF--HEAKAGWFLATKAPAKS 679

Query: 844 WL 845
           WL
Sbjct: 680 WL 681


>gi|240254191|ref|NP_174467.4| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
           thaliana]
 gi|357528959|sp|Q9C6S6.2|PPR67_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At1g31840
 gi|332193282|gb|AEE31403.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
           thaliana]
          Length = 840

 Score =  152 bits (384), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 106/402 (26%), Positives = 187/402 (46%), Gaps = 6/402 (1%)

Query: 375 QFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYC 434
           Q    ++LL  ++  G  PNVVT+  LI+ + +   ++ A D+FK M+  G EPD + Y 
Sbjct: 266 QIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYS 325

Query: 435 TLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQ 494
           TLID + KAG L +   ++ +    G+  D   +S  I+   K+G L  A  ++  M+ Q
Sbjct: 326 TLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQ 385

Query: 495 GCIPNLVTYNIMI-ALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDE 553
           G  PN+VTY I+I  L    R Y+ A  +Y  +   G EP  VTYS +++    CG L  
Sbjct: 386 GISPNVVTYTILIKGLCQDGRIYE-AFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRS 444

Query: 554 AEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLS 613
             A++ +M +  + PD  +YG+LVD   K G +  A  +   ML   +R NV   NSL+ 
Sbjct: 445 GFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLID 504

Query: 614 AFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSC-CTEARSPYDMGFCHELMAVSGHP 672
            + R+ +  +A  + + M   G+KP + T+T ++     E R    +     +  +   P
Sbjct: 505 GWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEP 564

Query: 673 AHMFLLSMPSPGPDGQNVRDHVG-SFLEMMHSEDRESKRGLVDAVVDFLHKSGLKEEAGS 731
             +   ++       ++++  +G    ++M      +   + + V+  L K    E+A  
Sbjct: 565 DALAYCTLIDAFC--KHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASK 622

Query: 732 VWEVAAQKNVYPDAVKEKGMSYWLINLHVMSDGTAVIALSRT 773
            +    +  + PD V    M     +L  + +   +  L + 
Sbjct: 623 FFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKV 664



 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 98/406 (24%), Positives = 176/406 (43%), Gaps = 3/406 (0%)

Query: 344 LGFFNWLRRQA---GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNR 400
           LG  + L  QA   G K D   +++ + +  ++      + +  +M+  G  PNVVTY  
Sbjct: 337 LGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTI 396

Query: 401 LIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAG 460
           LI    +   + EA  ++ Q+   G EP  VTY +LID   K G L     +Y+ M   G
Sbjct: 397 LIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMG 456

Query: 461 LSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSAL 520
             PD   Y V+++ L K G +  A +   +M+ Q    N+V +N +I    +   +  AL
Sbjct: 457 YPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEAL 516

Query: 521 KLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLW 580
           K++R M   G +PD  T++ VM V    G L+EA  +F  M +    PD   Y  L+D +
Sbjct: 517 KVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAF 576

Query: 581 GKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSL 640
            K        + ++ M +  +  ++  CN ++    +  ++ DA      ++   ++P +
Sbjct: 577 CKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDI 636

Query: 641 QTYTLLLSCCTEARSPYDMGFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEM 700
            TY  ++      R   +     EL+ V+    +   L++        N  D       +
Sbjct: 637 VTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSI 696

Query: 701 MHSEDRESKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAV 746
           M  +  +        ++D+  KS   E +  ++E   +K + P  V
Sbjct: 697 MAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIV 742



 Score =  124 bits (311), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 72/276 (26%), Positives = 139/276 (50%)

Query: 372 RARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRV 431
           R  +F    K+   M   G +P+V T+  ++        L EAL +F +M  +G EPD +
Sbjct: 508 RLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDAL 567

Query: 432 TYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEM 491
            YCTLID   K     + + ++  MQ   +S D    +V+I+ L K   ++ A + F  +
Sbjct: 568 AYCTLIDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNL 627

Query: 492 VNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYL 551
           +     P++VTYN MI      R    A +++  ++   F P+ VT +I++ VL     +
Sbjct: 628 IEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDM 687

Query: 552 DEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSL 611
           D A  +F+ M  K   P+   YG L+D + K+ ++  +++ +E M + G+ P++ + + +
Sbjct: 688 DGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSII 747

Query: 612 LSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
           +    + G++ +A ++    ++  L P +  Y +L+
Sbjct: 748 IDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILI 783



 Score =  118 bits (296), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 70/259 (27%), Positives = 129/259 (49%)

Query: 346 FFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSY 405
           F  +   + G + D   Y T++    +  +     +L D M R+    ++   N +IH  
Sbjct: 552 FLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLL 611

Query: 406 GRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDT 465
            + + + +A   F  +     EPD VTY T+I  +     LD A  +++ ++     P+T
Sbjct: 612 FKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNT 671

Query: 466 FTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRD 525
            T +++I+ L K   +  A ++F  M  +G  PN VTY  ++   +K+ + + + KL+ +
Sbjct: 672 VTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEE 731

Query: 526 MQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGN 585
           MQ  G  P  V+YSI+++ L   G +DEA  +F +      +PD   Y +L+  + K G 
Sbjct: 732 MQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGR 791

Query: 586 VRKAWEWYEAMLQAGLRPN 604
           + +A   YE ML+ G++P+
Sbjct: 792 LVEAALLYEHMLRNGVKPD 810



 Score =  102 bits (254), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 78/316 (24%), Positives = 144/316 (45%), Gaps = 22/316 (6%)

Query: 266 CVSERFSKPSREMKIPA--GLAPFSRHFAST-------GNVVESVSRILRQWKWGPLAEE 316
           C   RF +  +  ++    G+ P    F +        G + E++    R +K G L  +
Sbjct: 507 CRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMG-LEPD 565

Query: 317 ALGNTNYSMDAYQANQVLKQLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQF 376
           AL      +DA+  +         T+ L  F+ ++R      D      ++ +L +  + 
Sbjct: 566 ALAYCTL-IDAFCKHM------KPTIGLQLFDLMQRNK-ISADIAVCNVVIHLLFKCHRI 617

Query: 377 GAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTL 436
              +K  + ++    +P++VTYN +I  Y     L+EA  +F+ ++V    P+ VT   L
Sbjct: 618 EDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTIL 677

Query: 437 IDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGC 496
           I +  K   +D A+ M+  M   G  P+  TY  +++   K+  ++ + +LF EM  +G 
Sbjct: 678 IHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGI 737

Query: 497 IPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHC--GYLDEA 554
            P++V+Y+I+I    K      A  ++    +A   PD V Y+I++   G+C  G L EA
Sbjct: 738 SPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIR--GYCKVGRLVEA 795

Query: 555 EAVFAEMRRKNWVPDE 570
             ++  M R    PD+
Sbjct: 796 ALLYEHMLRNGVKPDD 811



 Score = 89.7 bits (221), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 56/191 (29%), Positives = 96/191 (50%), Gaps = 1/191 (0%)

Query: 346 FFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSY 405
           FFN L  +   + D  TY TM+      R+     ++ + +      PN VT   LIH  
Sbjct: 623 FFNNLI-EGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVL 681

Query: 406 GRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDT 465
            + N ++ A+ +F  M   G +P+ VTY  L+D  +K+  ++ +  ++++MQ  G+SP  
Sbjct: 682 CKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSI 741

Query: 466 FTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRD 525
            +YS+II+ L K G +  A  +F + ++   +P++V Y I+I    K      A  LY  
Sbjct: 742 VSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEH 801

Query: 526 MQNAGFEPDKV 536
           M   G +PD +
Sbjct: 802 MLRNGVKPDDL 812



 Score = 42.4 bits (98), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 51/250 (20%), Positives = 95/250 (38%), Gaps = 52/250 (20%)

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKM------------QAA 459
           N AL  F+  ++ G +P   ++ T+  +  + G  DVA  ++ +M               
Sbjct: 84  NSALKYFRWAEISGKDP---SFYTIAHVLIRNGMFDVADKVFDEMITNRGKDFNVLGSIR 140

Query: 460 GLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGC-IPNLVTYNIMIALQAKARNYQS 518
             S D      ++ C  + G +  A ++F      G  IP    Y ++ +L    R    
Sbjct: 141 DRSLDADVCKFLMECCCRYGMVDKALEIFVYSTQLGVVIPQDSVYRMLNSLIGSDRVDLI 200

Query: 519 ALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVD 578
           A   +  +   G EP  V+                                   +G ++D
Sbjct: 201 A-DHFDKLCRGGIEPSGVS----------------------------------AHGFVLD 225

Query: 579 LWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKP 638
                G V KA +++  +++ G R  + +CN +L   L V Q+  A  LL  +L+ G  P
Sbjct: 226 ALFCKGEVTKALDFHRLVMERGFRVGIVSCNKVLKG-LSVDQIEVASRLLSLVLDCGPAP 284

Query: 639 SLQTYTLLLS 648
           ++ T+  L++
Sbjct: 285 NVVTFCTLIN 294


>gi|79369396|ref|NP_176481.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|193806495|sp|Q9LQ14.2|PPR96_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g62930, chloroplastic; Flags: Precursor
 gi|332195902|gb|AEE34023.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 629

 Score =  152 bits (384), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 97/329 (29%), Positives = 159/329 (48%), Gaps = 18/329 (5%)

Query: 339 DHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTY 398
           D  +AL     + +    + D   YTT++  L   +       L  +M   G +PNVVTY
Sbjct: 235 DIDLALSLLKKMEK-GKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTY 293

Query: 399 NRLIH---SYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKK 455
           N LI    +YGR    ++A  +   M      P+ VT+  LID   K G L  A  +Y +
Sbjct: 294 NSLIRCLCNYGR---WSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDE 350

Query: 456 MQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARN 515
           M    + PD FTYS +IN       L  A  +F  M+++ C PN+VTYN +I    KA+ 
Sbjct: 351 MIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKR 410

Query: 516 YQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGL 575
            +  ++L+R+M   G   + VTY+ +++ L   G  D A+ +F +M      PD   Y +
Sbjct: 411 VEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSI 470

Query: 576 LVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLG 635
           L+D   K G + KA   +E + ++ + P++ T N ++    + G++ D + L   +   G
Sbjct: 471 LLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKG 530

Query: 636 LKPSLQTYTLLLSCCTEARSPYDMGFCHE 664
           +KP++  YT ++S           GFC +
Sbjct: 531 VKPNVIIYTTMIS-----------GFCRK 548



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 111/434 (25%), Positives = 195/434 (44%), Gaps = 4/434 (0%)

Query: 316 EALGNTNYSMDAYQANQVLKQLQDHT---VALGFFNWLRRQAGFKHDEHTYTTMVGILGR 372
           E + N   S D Y  N ++      +   +AL     + +  G++ D  T ++++     
Sbjct: 104 ERMQNLRISYDLYSYNILINCFCRRSQLPLALAVLGKMMK-LGYEPDIVTLSSLLNGYCH 162

Query: 373 ARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVT 432
            ++      L+DQM     QPN VT+N LIH     N  +EA+ +  +M   GC+PD  T
Sbjct: 163 GKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFT 222

Query: 433 YCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMV 492
           Y T+++   K G +D+A+ + KKM+   +  D   Y+ II+ L    ++  A  LF EM 
Sbjct: 223 YGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMD 282

Query: 493 NQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLD 552
           N+G  PN+VTYN +I        +  A +L  DM      P+ VT+S +++     G L 
Sbjct: 283 NKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLV 342

Query: 553 EAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLL 612
           EAE ++ EM +++  PD   Y  L++ +     + +A   +E M+     PNV T N+L+
Sbjct: 343 EAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLI 402

Query: 613 SAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGFCHELMAVSGHP 672
             F +  ++ +   L + M   GL  +  TY  L+    +A          + M   G P
Sbjct: 403 KGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVP 462

Query: 673 AHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRESKRGLVDAVVDFLHKSGLKEEAGSV 732
             +   S+   G       +      E +     E      + +++ + K+G  E+   +
Sbjct: 463 PDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDL 522

Query: 733 WEVAAQKNVYPDAV 746
           +   + K V P+ +
Sbjct: 523 FCSLSLKGVKPNVI 536



 Score =  146 bits (368), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 90/305 (29%), Positives = 157/305 (51%), Gaps = 1/305 (0%)

Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLI 402
           AL  F  +  + G + +  TY +++  L    ++   ++LL  M+     PNVVT++ LI
Sbjct: 274 ALNLFTEMDNK-GIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALI 332

Query: 403 HSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLS 462
            ++ +   L EA  ++ +M     +PD  TY +LI+       LD A  M++ M +    
Sbjct: 333 DAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCF 392

Query: 463 PDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKL 522
           P+  TY+ +I    KA  ++   +LF EM  +G + N VTYN +I    +A +   A K+
Sbjct: 393 PNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKI 452

Query: 523 YRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGK 582
           ++ M + G  PD +TYSI+++ L   G L++A  VF  +++    PD   Y ++++   K
Sbjct: 453 FKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCK 512

Query: 583 AGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQT 642
           AG V   W+ + ++   G++PNV    +++S F R G   +A  L + M   G  P+  T
Sbjct: 513 AGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGT 572

Query: 643 YTLLL 647
           Y  L+
Sbjct: 573 YNTLI 577



 Score =  136 bits (343), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 79/293 (26%), Positives = 155/293 (52%)

Query: 362 TYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQM 421
           T++ ++    +  +     KL D+M++    P++ TY+ LI+ +   + L+EA  +F+ M
Sbjct: 327 TFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELM 386

Query: 422 QVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHL 481
               C P+ VTY TLI    KA  ++  M+++++M   GL  +T TY+ +I  L +AG  
Sbjct: 387 ISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDC 446

Query: 482 QAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIV 541
             A ++F +MV+ G  P+++TY+I++    K    + AL ++  +Q +  EPD  TY+I+
Sbjct: 447 DMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIM 506

Query: 542 MEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGL 601
           +E +   G +++   +F  +  K   P+  +Y  ++  + + G   +A   +  M + G 
Sbjct: 507 IEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGT 566

Query: 602 RPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEAR 654
            PN  T N+L+ A LR G  + +  L++ M + G      T +++++   + R
Sbjct: 567 LPNSGTYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVINMLHDGR 619



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 77/267 (28%), Positives = 134/267 (50%), Gaps = 1/267 (0%)

Query: 359 DEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVF 418
           D  TY++++       +      + + M+   C PNVVTYN LI  + +A  + E +++F
Sbjct: 359 DIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELF 418

Query: 419 KQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKA 478
           ++M   G   + VTY TLI    +AG  D+A  ++KKM + G+ PD  TYS++++ L K 
Sbjct: 419 REMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKY 478

Query: 479 GHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTY 538
           G L+ A  +F  +      P++ TYNIMI    KA   +    L+  +   G +P+ + Y
Sbjct: 479 GKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIY 538

Query: 539 SIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQ 598
           + ++      G  +EA+A+F EM+    +P+   Y  L+    + G+   + E  + M  
Sbjct: 539 TTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEMRS 598

Query: 599 AGLRPNVPTCNSLLSAFLRVGQLSDAY 625
            G   +  T  S++   L  G+L  +Y
Sbjct: 599 CGFVGDASTI-SMVINMLHDGRLEKSY 624



 Score =  115 bits (289), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 99/398 (24%), Positives = 179/398 (44%), Gaps = 28/398 (7%)

Query: 363 YTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQ 422
           +  ++  + +  +F  +  L ++M       ++ +YN LI+ + R + L  AL V  +M 
Sbjct: 83  FNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNILINCFCRRSQLPLALAVLGKMM 142

Query: 423 VVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQ 482
            +G EPD VT  +L++ +     +  A+ +  +M      P+T T++ +I+ L       
Sbjct: 143 KLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKAS 202

Query: 483 AAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVM 542
            A  L   MV +GC P+L TY  ++    K  +   AL L + M+    E D V Y+ ++
Sbjct: 203 EAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTII 262

Query: 543 EVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLR 602
           + L +   +++A  +F EM  K   P+   Y  L+      G    A      M++  + 
Sbjct: 263 DALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKIN 322

Query: 603 PNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGFC 662
           PNV T ++L+ AF++ G+L +A  L   M+   + P + TY+ L++           GFC
Sbjct: 323 PNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLIN-----------GFC 371

Query: 663 -HELMAVSGHPAHMFLLSMPSPG-PDGQNVRDHVGSFLEMMHSED-----RE-SKRGLVD 714
            H+ +       HMF L +     P+       +  F +    E+     RE S+RGLV 
Sbjct: 372 MHDRL---DEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVG 428

Query: 715 AVVDF------LHKSGLKEEAGSVWEVAAQKNVYPDAV 746
             V +      L ++G  + A  +++      V PD +
Sbjct: 429 NTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDII 466



 Score =  108 bits (269), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 88/330 (26%), Positives = 143/330 (43%), Gaps = 12/330 (3%)

Query: 382 LLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHA 441
           L  +MV+    P++V +N+L+ +  + N  +  + + ++MQ +    D  +Y  LI+   
Sbjct: 67  LFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNILINCFC 126

Query: 442 KAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLV 501
           +   L +A+ +  KM   G  PD  T S ++N       +  A  L  +M      PN V
Sbjct: 127 RRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTV 186

Query: 502 TYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEM 561
           T+N +I           A+ L   M   G +PD  TY  V+  L   G +D A ++  +M
Sbjct: 187 TFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKM 246

Query: 562 RRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQL 621
            +     D  +Y  ++D      NV  A   +  M   G+RPNV T NSL+      G+ 
Sbjct: 247 EKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRW 306

Query: 622 SDAYHLLQGMLNLGLKPSLQTYTLLLSC------CTEARSPYDMGFCHELMAVSGHPAHM 675
           SDA  LL  M+   + P++ T++ L+          EA   YD     E++  S  P  +
Sbjct: 307 SDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYD-----EMIKRSIDP-DI 360

Query: 676 FLLSMPSPGPDGQNVRDHVGSFLEMMHSED 705
           F  S    G    +  D      E+M S+D
Sbjct: 361 FTYSSLINGFCMHDRLDEAKHMFELMISKD 390



 Score =  101 bits (251), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 61/202 (30%), Positives = 108/202 (53%), Gaps = 1/202 (0%)

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
           Q G   +  TY T++  L +A       K+  +MV DG  P+++TY+ L+    +   L 
Sbjct: 423 QRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLE 482

Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
           +AL VF+ +Q    EPD  TY  +I+   KAG ++   D++  +   G+ P+   Y+ +I
Sbjct: 483 KALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMI 542

Query: 473 NCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFE 532
           +   + G  + A  LF EM   G +PN  TYN +I  + +  +  ++ +L ++M++ GF 
Sbjct: 543 SGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEMRSCGFV 602

Query: 533 PDKVTYSIVMEVLGHCGYLDEA 554
            D  T S+V+ +L H G L+++
Sbjct: 603 GDASTISMVINML-HDGRLEKS 623



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 37/168 (22%), Positives = 84/168 (50%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           G   D  TY+ ++  L +  +      + + + +   +P++ TYN +I    +A  + + 
Sbjct: 460 GVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDG 519

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
            D+F  + + G +P+ + Y T+I    + G  + A  ++++M+  G  P++ TY+ +I  
Sbjct: 520 WDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRA 579

Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKL 522
             + G   A+ +L  EM + G + +  T +++I +    R  +S L++
Sbjct: 580 RLRDGDKAASAELIKEMRSCGFVGDASTISMVINMLHDGRLEKSYLEM 627


>gi|8493580|gb|AAF75803.1|AC011000_6 Contains weak similarity to leaf protein from Ipomea nil gb|D85101
           and contains a RepB PF|01051 protein and multiple PPR
           PF|01535 repeats [Arabidopsis thaliana]
          Length = 613

 Score =  152 bits (384), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 97/329 (29%), Positives = 159/329 (48%), Gaps = 18/329 (5%)

Query: 339 DHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTY 398
           D  +AL     + +    + D   YTT++  L   +       L  +M   G +PNVVTY
Sbjct: 219 DIDLALSLLKKMEK-GKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTY 277

Query: 399 NRLIH---SYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKK 455
           N LI    +YGR    ++A  +   M      P+ VT+  LID   K G L  A  +Y +
Sbjct: 278 NSLIRCLCNYGR---WSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDE 334

Query: 456 MQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARN 515
           M    + PD FTYS +IN       L  A  +F  M+++ C PN+VTYN +I    KA+ 
Sbjct: 335 MIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKR 394

Query: 516 YQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGL 575
            +  ++L+R+M   G   + VTY+ +++ L   G  D A+ +F +M      PD   Y +
Sbjct: 395 VEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSI 454

Query: 576 LVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLG 635
           L+D   K G + KA   +E + ++ + P++ T N ++    + G++ D + L   +   G
Sbjct: 455 LLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKG 514

Query: 636 LKPSLQTYTLLLSCCTEARSPYDMGFCHE 664
           +KP++  YT ++S           GFC +
Sbjct: 515 VKPNVIIYTTMIS-----------GFCRK 532



 Score =  147 bits (372), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 111/434 (25%), Positives = 195/434 (44%), Gaps = 4/434 (0%)

Query: 316 EALGNTNYSMDAYQANQVLKQLQDHT---VALGFFNWLRRQAGFKHDEHTYTTMVGILGR 372
           E + N   S D Y  N ++      +   +AL     + +  G++ D  T ++++     
Sbjct: 88  ERMQNLRISYDLYSYNILINCFCRRSQLPLALAVLGKMMK-LGYEPDIVTLSSLLNGYCH 146

Query: 373 ARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVT 432
            ++      L+DQM     QPN VT+N LIH     N  +EA+ +  +M   GC+PD  T
Sbjct: 147 GKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFT 206

Query: 433 YCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMV 492
           Y T+++   K G +D+A+ + KKM+   +  D   Y+ II+ L    ++  A  LF EM 
Sbjct: 207 YGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMD 266

Query: 493 NQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLD 552
           N+G  PN+VTYN +I        +  A +L  DM      P+ VT+S +++     G L 
Sbjct: 267 NKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLV 326

Query: 553 EAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLL 612
           EAE ++ EM +++  PD   Y  L++ +     + +A   +E M+     PNV T N+L+
Sbjct: 327 EAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLI 386

Query: 613 SAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGFCHELMAVSGHP 672
             F +  ++ +   L + M   GL  +  TY  L+    +A          + M   G P
Sbjct: 387 KGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVP 446

Query: 673 AHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRESKRGLVDAVVDFLHKSGLKEEAGSV 732
             +   S+   G       +      E +     E      + +++ + K+G  E+   +
Sbjct: 447 PDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDL 506

Query: 733 WEVAAQKNVYPDAV 746
           +   + K V P+ +
Sbjct: 507 FCSLSLKGVKPNVI 520



 Score =  146 bits (368), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 90/305 (29%), Positives = 157/305 (51%), Gaps = 1/305 (0%)

Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLI 402
           AL  F  +  + G + +  TY +++  L    ++   ++LL  M+     PNVVT++ LI
Sbjct: 258 ALNLFTEMDNK-GIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALI 316

Query: 403 HSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLS 462
            ++ +   L EA  ++ +M     +PD  TY +LI+       LD A  M++ M +    
Sbjct: 317 DAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCF 376

Query: 463 PDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKL 522
           P+  TY+ +I    KA  ++   +LF EM  +G + N VTYN +I    +A +   A K+
Sbjct: 377 PNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKI 436

Query: 523 YRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGK 582
           ++ M + G  PD +TYSI+++ L   G L++A  VF  +++    PD   Y ++++   K
Sbjct: 437 FKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCK 496

Query: 583 AGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQT 642
           AG V   W+ + ++   G++PNV    +++S F R G   +A  L + M   G  P+  T
Sbjct: 497 AGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGT 556

Query: 643 YTLLL 647
           Y  L+
Sbjct: 557 YNTLI 561



 Score =  136 bits (343), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 79/293 (26%), Positives = 155/293 (52%)

Query: 362 TYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQM 421
           T++ ++    +  +     KL D+M++    P++ TY+ LI+ +   + L+EA  +F+ M
Sbjct: 311 TFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELM 370

Query: 422 QVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHL 481
               C P+ VTY TLI    KA  ++  M+++++M   GL  +T TY+ +I  L +AG  
Sbjct: 371 ISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDC 430

Query: 482 QAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIV 541
             A ++F +MV+ G  P+++TY+I++    K    + AL ++  +Q +  EPD  TY+I+
Sbjct: 431 DMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIM 490

Query: 542 MEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGL 601
           +E +   G +++   +F  +  K   P+  +Y  ++  + + G   +A   +  M + G 
Sbjct: 491 IEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGT 550

Query: 602 RPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEAR 654
            PN  T N+L+ A LR G  + +  L++ M + G      T +++++   + R
Sbjct: 551 LPNSGTYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVINMLHDGR 603



 Score =  127 bits (319), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 77/267 (28%), Positives = 134/267 (50%), Gaps = 1/267 (0%)

Query: 359 DEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVF 418
           D  TY++++       +      + + M+   C PNVVTYN LI  + +A  + E +++F
Sbjct: 343 DIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELF 402

Query: 419 KQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKA 478
           ++M   G   + VTY TLI    +AG  D+A  ++KKM + G+ PD  TYS++++ L K 
Sbjct: 403 REMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKY 462

Query: 479 GHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTY 538
           G L+ A  +F  +      P++ TYNIMI    KA   +    L+  +   G +P+ + Y
Sbjct: 463 GKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIY 522

Query: 539 SIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQ 598
           + ++      G  +EA+A+F EM+    +P+   Y  L+    + G+   + E  + M  
Sbjct: 523 TTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEMRS 582

Query: 599 AGLRPNVPTCNSLLSAFLRVGQLSDAY 625
            G   +  T  S++   L  G+L  +Y
Sbjct: 583 CGFVGDASTI-SMVINMLHDGRLEKSY 608



 Score =  115 bits (289), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 99/398 (24%), Positives = 179/398 (44%), Gaps = 28/398 (7%)

Query: 363 YTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQ 422
           +  ++  + +  +F  +  L ++M       ++ +YN LI+ + R + L  AL V  +M 
Sbjct: 67  FNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNILINCFCRRSQLPLALAVLGKMM 126

Query: 423 VVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQ 482
            +G EPD VT  +L++ +     +  A+ +  +M      P+T T++ +I+ L       
Sbjct: 127 KLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKAS 186

Query: 483 AAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVM 542
            A  L   MV +GC P+L TY  ++    K  +   AL L + M+    E D V Y+ ++
Sbjct: 187 EAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTII 246

Query: 543 EVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLR 602
           + L +   +++A  +F EM  K   P+   Y  L+      G    A      M++  + 
Sbjct: 247 DALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKIN 306

Query: 603 PNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGFC 662
           PNV T ++L+ AF++ G+L +A  L   M+   + P + TY+ L++           GFC
Sbjct: 307 PNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLIN-----------GFC 355

Query: 663 -HELMAVSGHPAHMFLLSMPSPG-PDGQNVRDHVGSFLEMMHSED-----RE-SKRGLVD 714
            H+ +       HMF L +     P+       +  F +    E+     RE S+RGLV 
Sbjct: 356 MHDRL---DEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVG 412

Query: 715 AVVDF------LHKSGLKEEAGSVWEVAAQKNVYPDAV 746
             V +      L ++G  + A  +++      V PD +
Sbjct: 413 NTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDII 450



 Score =  108 bits (269), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 88/330 (26%), Positives = 143/330 (43%), Gaps = 12/330 (3%)

Query: 382 LLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHA 441
           L  +MV+    P++V +N+L+ +  + N  +  + + ++MQ +    D  +Y  LI+   
Sbjct: 51  LFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNILINCFC 110

Query: 442 KAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLV 501
           +   L +A+ +  KM   G  PD  T S ++N       +  A  L  +M      PN V
Sbjct: 111 RRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTV 170

Query: 502 TYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEM 561
           T+N +I           A+ L   M   G +PD  TY  V+  L   G +D A ++  +M
Sbjct: 171 TFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKM 230

Query: 562 RRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQL 621
            +     D  +Y  ++D      NV  A   +  M   G+RPNV T NSL+      G+ 
Sbjct: 231 EKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRW 290

Query: 622 SDAYHLLQGMLNLGLKPSLQTYTLLLSC------CTEARSPYDMGFCHELMAVSGHPAHM 675
           SDA  LL  M+   + P++ T++ L+          EA   YD     E++  S  P  +
Sbjct: 291 SDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYD-----EMIKRSIDP-DI 344

Query: 676 FLLSMPSPGPDGQNVRDHVGSFLEMMHSED 705
           F  S    G    +  D      E+M S+D
Sbjct: 345 FTYSSLINGFCMHDRLDEAKHMFELMISKD 374



 Score =  101 bits (251), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 61/202 (30%), Positives = 108/202 (53%), Gaps = 1/202 (0%)

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
           Q G   +  TY T++  L +A       K+  +MV DG  P+++TY+ L+    +   L 
Sbjct: 407 QRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLE 466

Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
           +AL VF+ +Q    EPD  TY  +I+   KAG ++   D++  +   G+ P+   Y+ +I
Sbjct: 467 KALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMI 526

Query: 473 NCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFE 532
           +   + G  + A  LF EM   G +PN  TYN +I  + +  +  ++ +L ++M++ GF 
Sbjct: 527 SGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEMRSCGFV 586

Query: 533 PDKVTYSIVMEVLGHCGYLDEA 554
            D  T S+V+ +L H G L+++
Sbjct: 587 GDASTISMVINML-HDGRLEKS 607



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 37/168 (22%), Positives = 84/168 (50%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           G   D  TY+ ++  L +  +      + + + +   +P++ TYN +I    +A  + + 
Sbjct: 444 GVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDG 503

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
            D+F  + + G +P+ + Y T+I    + G  + A  ++++M+  G  P++ TY+ +I  
Sbjct: 504 WDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRA 563

Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKL 522
             + G   A+ +L  EM + G + +  T +++I +    R  +S L++
Sbjct: 564 RLRDGDKAASAELIKEMRSCGFVGDASTISMVINMLHDGRLEKSYLEM 611


>gi|242084770|ref|XP_002442810.1| hypothetical protein SORBIDRAFT_08g003240 [Sorghum bicolor]
 gi|241943503|gb|EES16648.1| hypothetical protein SORBIDRAFT_08g003240 [Sorghum bicolor]
          Length = 722

 Score =  152 bits (384), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 104/327 (31%), Positives = 150/327 (45%), Gaps = 5/327 (1%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           R  G + D  TY +++    +A        L   +   G  P V+TYN LI  Y R   L
Sbjct: 370 RAMGLQPDVITYNSLLNGYCKAGSLKEALLLFGDLRHAGLAPTVLTYNILIDGYCRLGDL 429

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
            EA  + ++M   GC PD  TY  L+     A  L +A + + +M + GL PD F Y+  
Sbjct: 430 EEARRLKEEMVEQGCLPDVCTYTILMKGSHNACSLAMAREFFDEMLSKGLQPDCFAYNTR 489

Query: 472 INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF 531
           I      G +  A +L   M+ +G   + VTYNI+I    K  N   A  L   M + G 
Sbjct: 490 IRAELTLGAIAKAFRLREVMMLEGISSDTVTYNILIDGLCKTGNLNDAKDLQMKMVHNGL 549

Query: 532 EPDKVTYSIVMEVLGHC--GYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKA 589
           +PD +TY+ ++    HC  G L EA   F +M      P    Y + +  + + GN+  A
Sbjct: 550 QPDCITYTCLIH--AHCERGLLREARKFFKDMISDGLAPSAVTYTVFIHAYCRRGNLYSA 607

Query: 590 WEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSC 649
           + W+  ML+ G+ PN  T N L+ A  R G+   AY     ML  GL P+  TYTLL+  
Sbjct: 608 YGWFRKMLEEGVEPNEITYNVLIHALCRTGRTQLAYRHFHEMLERGLVPNKYTYTLLIDG 667

Query: 650 -CTEARSPYDMGFCHELMAVSGHPAHM 675
            C E      M F  E+     HP ++
Sbjct: 668 NCKEGNWEDAMRFYFEMHQNGIHPDYL 694



 Score =  133 bits (335), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 83/263 (31%), Positives = 126/263 (47%)

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
           + G   D  TYT ++     A       +  D+M+  G QP+   YN  I +      + 
Sbjct: 441 EQGCLPDVCTYTILMKGSHNACSLAMAREFFDEMLSKGLQPDCFAYNTRIRAELTLGAIA 500

Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
           +A  + + M + G   D VTY  LID   K G L+ A D+  KM   GL PD  TY+ +I
Sbjct: 501 KAFRLREVMMLEGISSDTVTYNILIDGLCKTGNLNDAKDLQMKMVHNGLQPDCITYTCLI 560

Query: 473 NCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFE 532
           +   + G L+ A + F +M++ G  P+ VTY + I    +  N  SA   +R M   G E
Sbjct: 561 HAHCERGLLREARKFFKDMISDGLAPSAVTYTVFIHAYCRRGNLYSAYGWFRKMLEEGVE 620

Query: 533 PDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEW 592
           P+++TY++++  L   G    A   F EM  +  VP++  Y LL+D   K GN   A  +
Sbjct: 621 PNEITYNVLIHALCRTGRTQLAYRHFHEMLERGLVPNKYTYTLLIDGNCKEGNWEDAMRF 680

Query: 593 YEAMLQAGLRPNVPTCNSLLSAF 615
           Y  M Q G+ P+  T  +L   F
Sbjct: 681 YFEMHQNGIHPDYLTHKALFKGF 703



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 90/305 (29%), Positives = 136/305 (44%), Gaps = 1/305 (0%)

Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLI 402
           AL  F  LR  AG      TY  ++    R        +L ++MV  GC P+V TY  L+
Sbjct: 397 ALLLFGDLR-HAGLAPTVLTYNILIDGYCRLGDLEEARRLKEEMVEQGCLPDVCTYTILM 455

Query: 403 HSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLS 462
                A  L  A + F +M   G +PD   Y T I      G +  A  + + M   G+S
Sbjct: 456 KGSHNACSLAMAREFFDEMLSKGLQPDCFAYNTRIRAELTLGAIAKAFRLREVMMLEGIS 515

Query: 463 PDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKL 522
            DT TY+++I+ L K G+L  A  L  +MV+ G  P+ +TY  +I    +    + A K 
Sbjct: 516 SDTVTYNILIDGLCKTGNLNDAKDLQMKMVHNGLQPDCITYTCLIHAHCERGLLREARKF 575

Query: 523 YRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGK 582
           ++DM + G  P  VTY++ +      G L  A   F +M  +   P+E  Y +L+    +
Sbjct: 576 FKDMISDGLAPSAVTYTVFIHAYCRRGNLYSAYGWFRKMLEEGVEPNEITYNVLIHALCR 635

Query: 583 AGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQT 642
            G  + A+  +  ML+ GL PN  T   L+    + G   DA      M   G+ P   T
Sbjct: 636 TGRTQLAYRHFHEMLERGLVPNKYTYTLLIDGNCKEGNWEDAMRFYFEMHQNGIHPDYLT 695

Query: 643 YTLLL 647
           +  L 
Sbjct: 696 HKALF 700



 Score =  127 bits (318), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 91/317 (28%), Positives = 154/317 (48%), Gaps = 1/317 (0%)

Query: 331 NQVLKQLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDG 390
           +  LK+ ++  VA+       R +G   ++ T+  ++  L R        ++++ M R  
Sbjct: 245 DSFLKEGRNDKVAMLLKEMETRGSGCLPNDVTHNVVITGLARKGDLEEAAEMVEGM-RLS 303

Query: 391 CQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAM 450
            + +  TYN LI       ++ +A D+  +M+  G  P  VTY  +I    ++G ++ A 
Sbjct: 304 KKASSFTYNPLITGLLAKGFVKKADDLQLEMENEGIMPTVVTYNAMIHGLLQSGQVEAAQ 363

Query: 451 DMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQ 510
             + +M+A GL PD  TY+ ++N   KAG L+ A  LF ++ + G  P ++TYNI+I   
Sbjct: 364 VKFVEMRAMGLQPDVITYNSLLNGYCKAGSLKEALLLFGDLRHAGLAPTVLTYNILIDGY 423

Query: 511 AKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDE 570
            +  + + A +L  +M   G  PD  TY+I+M+   +   L  A   F EM  K   PD 
Sbjct: 424 CRLGDLEEARRLKEEMVEQGCLPDVCTYTILMKGSHNACSLAMAREFFDEMLSKGLQPDC 483

Query: 571 PVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQG 630
             Y   +      G + KA+   E M+  G+  +  T N L+    + G L+DA  L   
Sbjct: 484 FAYNTRIRAELTLGAIAKAFRLREVMMLEGISSDTVTYNILIDGLCKTGNLNDAKDLQMK 543

Query: 631 MLNLGLKPSLQTYTLLL 647
           M++ GL+P   TYT L+
Sbjct: 544 MVHNGLQPDCITYTCLI 560



 Score =  124 bits (312), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 85/315 (26%), Positives = 159/315 (50%), Gaps = 36/315 (11%)

Query: 369 ILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQV--VGC 426
           +L  A ++  I  +  +M++ G +P++VTYN L+ S+ +    ++   + K+M+    GC
Sbjct: 211 VLSDAARWDDICAVHAEMLQLGIEPSIVTYNTLLDSFLKEGRNDKVAMLLKEMETRGSGC 270

Query: 427 EPDRVTYCTLI-------DIHAKA---------------------------GFLDVAMDM 452
            P+ VT+  +I       D+   A                           GF+  A D+
Sbjct: 271 LPNDVTHNVVITGLARKGDLEEAAEMVEGMRLSKKASSFTYNPLITGLLAKGFVKKADDL 330

Query: 453 YKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAK 512
             +M+  G+ P   TY+ +I+ L ++G ++AA   F EM   G  P+++TYN ++    K
Sbjct: 331 QLEMENEGIMPTVVTYNAMIHGLLQSGQVEAAQVKFVEMRAMGLQPDVITYNSLLNGYCK 390

Query: 513 ARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPV 572
           A + + AL L+ D+++AG  P  +TY+I+++     G L+EA  +  EM  +  +PD   
Sbjct: 391 AGSLKEALLLFGDLRHAGLAPTVLTYNILIDGYCRLGDLEEARRLKEEMVEQGCLPDVCT 450

Query: 573 YGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGML 632
           Y +L+     A ++  A E+++ ML  GL+P+    N+ + A L +G ++ A+ L + M+
Sbjct: 451 YTILMKGSHNACSLAMAREFFDEMLSKGLQPDCFAYNTRIRAELTLGAIAKAFRLREVMM 510

Query: 633 NLGLKPSLQTYTLLL 647
             G+     TY +L+
Sbjct: 511 LEGISSDTVTYNILI 525



 Score =  120 bits (300), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 129/479 (26%), Positives = 198/479 (41%), Gaps = 66/479 (13%)

Query: 385 QMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAG 444
           +M   G  P+V   NR++     A   ++   V  +M  +G EP  VTY TL+D   K G
Sbjct: 192 EMASHGVAPDVKDCNRVLRVLSDAARWDDICAVHAEMLQLGIEPSIVTYNTLLDSFLKEG 251

Query: 445 FLDVAMDMYKKMQ--AAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVT 502
             D    + K+M+   +G  P+  T++V+I  L + G L+ A ++  E +      +  T
Sbjct: 252 RNDKVAMLLKEMETRGSGCLPNDVTHNVVITGLARKGDLEEAAEMV-EGMRLSKKASSFT 310

Query: 503 YNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMR 562
           YN +I         + A  L  +M+N G  P  VTY+ ++  L   G ++ A+  F EMR
Sbjct: 311 YNPLITGLLAKGFVKKADDLQLEMENEGIMPTVVTYNAMIHGLLQSGQVEAAQVKFVEMR 370

Query: 563 RKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLS 622
                PD   Y  L++ + KAG++++A   +  +  AGL P V T N L+  + R+G L 
Sbjct: 371 AMGLQPDVITYNSLLNGYCKAGSLKEALLLFGDLRHAGLAPTVLTYNILIDGYCRLGDLE 430

Query: 623 DAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGFCHELMAVSGHPAHMFLLSMPS 682
           +A  L + M+  G  P + TYT+L+     A        C   MA        F   M S
Sbjct: 431 EARRLKEEMVEQGCLPDVCTYTILMKGSHNA--------CSLAMARE------FFDEMLS 476

Query: 683 PG--PD--GQNVRDHVGSFL----------EMMHSEDRESKRGLVDAVVDFLHKSGLKEE 728
            G  PD    N R      L          E+M  E   S     + ++D L K+G   +
Sbjct: 477 KGLQPDCFAYNTRIRAELTLGAIAKAFRLREVMMLEGISSDTVTYNILIDGLCKTGNLND 536

Query: 729 AGSVWEVAAQKNVYPDAVKEKGMSYWLINLH---------------VMSDGTAVIALSRT 773
           A  +        + PD +        LI+ H               ++SDG A  A++ T
Sbjct: 537 AKDLQMKMVHNGLQPDCITYT----CLIHAHCERGLLREARKFFKDMISDGLAPSAVTYT 592

Query: 774 L---------------AWFRKQMLISGVGPSRIDIVTGWGRRSRVTGTSLVRQAVQELL 817
           +                WFRK ML  GV P+ I          R   T L  +   E+L
Sbjct: 593 VFIHAYCRRGNLYSAYGWFRK-MLEEGVEPNEITYNVLIHALCRTGRTQLAYRHFHEML 650



 Score = 72.4 bits (176), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 56/204 (27%), Positives = 100/204 (49%), Gaps = 5/204 (2%)

Query: 448 VAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMI 507
           + +  + +M + G++PD    + ++  L  A        +  EM+  G  P++VTYN ++
Sbjct: 185 LCLSAFHEMASHGVAPDVKDCNRVLRVLSDAARWDDICAVHAEMLQLGIEPSIVTYNTLL 244

Query: 508 -ALQAKARNYQSALKLYRDMQN--AGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRK 564
            +   + RN + A+ L ++M+   +G  P+ VT+++V+  L   G L+EA  +   MR  
Sbjct: 245 DSFLKEGRNDKVAM-LLKEMETRGSGCLPNDVTHNVVITGLARKGDLEEAAEMVEGMRLS 303

Query: 565 NWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDA 624
                     L+  L  K G V+KA +    M   G+ P V T N+++   L+ GQ+  A
Sbjct: 304 KKASSFTYNPLITGLLAK-GFVKKADDLQLEMENEGIMPTVVTYNAMIHGLLQSGQVEAA 362

Query: 625 YHLLQGMLNLGLKPSLQTYTLLLS 648
                 M  +GL+P + TY  LL+
Sbjct: 363 QVKFVEMRAMGLQPDVITYNSLLN 386


>gi|222623994|gb|EEE58126.1| hypothetical protein OsJ_09025 [Oryza sativa Japonica Group]
          Length = 1269

 Score =  152 bits (384), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 125/471 (26%), Positives = 209/471 (44%), Gaps = 49/471 (10%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           G   D  TY  ++  L ++R+      LLD+M     +PNVV Y  LI  + R    +EA
Sbjct: 287 GLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGFMREGNADEA 346

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
             + K+M   G +P+++TY  L+    K G +D A  + K+M      PDT TY++II  
Sbjct: 347 FKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLIIEG 406

Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPD 534
             +    + A +L  EM N G  PN+ TY+IMI    ++   + A  L  +M   G +P+
Sbjct: 407 HFRHHSKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPN 466

Query: 535 KVTYSIVMEVLGHC--GYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEW 592
              Y+ ++   G+C  G +  A  +F +M + N +PD   Y  L+    K G V ++ ++
Sbjct: 467 AFVYAPLIS--GYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKY 524

Query: 593 YEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS---- 648
           +  M + GL PN  T + L+  +L+ G L  A  L+Q ML+ GLKP+   Y  LL     
Sbjct: 525 FAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFK 584

Query: 649 ------CCTEARSPYDMG----------FCHELMAVSGHPAHMFLLSMPSPGPDGQNVRD 692
                   +  +S  D G            H L +     A   +LS         +V  
Sbjct: 585 SDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSGIEKNGSVPDVHV 644

Query: 693 HVGSFLEMMHSEDRESKRGLVD---------------AVVDFLHKSGLKEEAGSVWEVAA 737
           +      +  + DRE   G++D               A++D L KSG         +++ 
Sbjct: 645 YSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSG---------DISY 695

Query: 738 QKNVYPDAVKEKGMSYWLINLHVMSDGTAVIALSRTLAWFRKQMLISGVGP 788
            +NV+ +++  KG+    +    + DG+  +       +   +ML +G+ P
Sbjct: 696 ARNVF-NSILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITP 745



 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 102/393 (25%), Positives = 181/393 (46%), Gaps = 1/393 (0%)

Query: 354 AGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNE 413
           AG   + +TY+ M+  L ++ +    + LL++M   G +PN   Y  LI  Y R   ++ 
Sbjct: 426 AGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVSL 485

Query: 414 ALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIIN 473
           A ++F +M  V   PD   Y +LI   +K G ++ +   + +MQ  GL P+ FTYS +I+
Sbjct: 486 ACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIH 545

Query: 474 CLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEP 533
              K G L++A QL   M++ G  PN V Y  ++    K+ + +     ++ M + G   
Sbjct: 546 GYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVML 605

Query: 534 DKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWY 593
           D   Y I++  L   G ++ A  V + + +   VPD  VY  L+    K  +  KA+   
Sbjct: 606 DNRIYGILIHNLSSSGNMEAAFRVLSGIEKNGSVPDVHVYSSLISGLCKTADREKAFGIL 665

Query: 594 EAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEA 653
           + M + G+ PN+   N+L+    + G +S A ++   +L  GL P+  TYT L+    + 
Sbjct: 666 DEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLVPNCVTYTSLIDGSCKV 725

Query: 654 RSPYDMGFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRESKRGLV 713
               +  + +  M  +G     F+ S+ + G       +     +E M      S     
Sbjct: 726 GDISNAFYLYNEMLATGITPDAFVYSVLTTGCSSAGDLEQAMFLIEEMFLRGHASISSF- 784

Query: 714 DAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAV 746
           + +VD   K G  +E   +  V   + + P+A+
Sbjct: 785 NNLVDGFCKRGKMQETLKLLHVIMGRGLVPNAL 817



 Score =  128 bits (321), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 82/313 (26%), Positives = 152/313 (48%), Gaps = 1/313 (0%)

Query: 354 AGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNE 413
           AG + ++ TY  +V  L +  Q    + LL QMVRD  +P+ +TYN +I  + R +   +
Sbjct: 356 AGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLIIEGHFRHHSKKD 415

Query: 414 ALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIIN 473
           A  +  +M+  G  P+  TY  +I    ++G  + A D+ ++M   GL P+ F Y+ +I+
Sbjct: 416 AFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLIS 475

Query: 474 CLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEP 533
              + G++  A ++F +M     +P+L  YN +I   +K    + + K +  MQ  G  P
Sbjct: 476 GYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLP 535

Query: 534 DKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWY 593
           ++ TYS ++      G L+ AE +   M      P++ +Y  L++ + K+ ++ K    +
Sbjct: 536 NEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTF 595

Query: 594 EAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS-CCTE 652
           ++ML  G+  +      L+      G +  A+ +L G+   G  P +  Y+ L+S  C  
Sbjct: 596 KSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSGIEKNGSVPDVHVYSSLISGLCKT 655

Query: 653 ARSPYDMGFCHEL 665
           A      G   E+
Sbjct: 656 ADREKAFGILDEM 668



 Score =  121 bits (303), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 80/278 (28%), Positives = 130/278 (46%), Gaps = 4/278 (1%)

Query: 372 RARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRV 431
           + R+F    K+L +M   GC  N VTYN LI    R+  + EA    K M+  G  PD  
Sbjct: 234 KVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEEAFGFKKDMEDYGLVPDGF 293

Query: 432 TYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEM 491
           TY  LI+   K+   + A  +  +M  A L P+   Y+ +I+   + G+   A ++  EM
Sbjct: 294 TYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGFMREGNADEAFKMIKEM 353

Query: 492 VNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYL 551
           V  G  PN +TY+ ++    K      A  L + M      PD +TY++++E  GH  + 
Sbjct: 354 VAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLIIE--GHFRHH 411

Query: 552 DEAEA--VFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCN 609
            + +A  + +EM      P+   Y +++    ++G   KA +  E M   GL+PN     
Sbjct: 412 SKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYA 471

Query: 610 SLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
            L+S + R G +S A  +   M  + + P L  Y  L+
Sbjct: 472 PLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLI 509



 Score =  117 bits (294), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 78/263 (29%), Positives = 124/263 (47%), Gaps = 11/263 (4%)

Query: 402 IHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGL 461
           + +Y +    + A  V  +M+  GC  + VTY  LI    ++G ++ A    K M+  GL
Sbjct: 229 LEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEEAFGFKKDMEDYGL 288

Query: 462 SPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALK 521
            PD FTY  +IN L K+     A  L  EM      PN+V Y  +I    +  N   A K
Sbjct: 289 VPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGFMREGNADEAFK 348

Query: 522 LYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWG 581
           + ++M  AG +P+K+TY  ++  L   G +D A  +  +M R +  PD   Y L+++   
Sbjct: 349 MIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLIIEGHF 408

Query: 582 KAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQ 641
           +  + + A+     M  AG+ PNV T + ++    + G+   A  LL+ M   GLKP+  
Sbjct: 409 RHHSKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAF 468

Query: 642 TYTLLLSCCTEARSPYDMGFCHE 664
            Y  L+S           G+C E
Sbjct: 469 VYAPLIS-----------GYCRE 480



 Score =  113 bits (282), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 86/306 (28%), Positives = 144/306 (47%), Gaps = 30/306 (9%)

Query: 359 DEHTYTTMVGIL----GRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           D H Y++++  L     R + FG    +LD+M + G  PN+V YN LI    ++  ++ A
Sbjct: 641 DVHVYSSLISGLCKTADREKAFG----ILDEMSKKGVDPNIVCYNALIDGLCKSGDISYA 696

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
            +VF  +   G  P+ VTY +LID   K G +  A  +Y +M A G++PD F YSV+   
Sbjct: 697 RNVFNSILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLTTG 756

Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPD 534
              AG L+ A  L  EM  +G   ++ ++N ++    K    Q  LKL   +   G  P+
Sbjct: 757 CSSAGDLEQAMFLIEEMFLRGH-ASISSFNNLVDGFCKRGKMQETLKLLHVIMGRGLVPN 815

Query: 535 KVTYSIVMEVLGHCGYLDEAEAVFAEMRRKN-------------------WVPDEPVYGL 575
            +T   ++  L   G L E   +F E+++K                     +P + V  +
Sbjct: 816 ALTIENIISGLSEAGKLSEVHTIFVELQQKTSESAARHFSSLFMDMINQGKIPLDVVDDM 875

Query: 576 LVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLG 635
           + D   K GN+ KA    + ++         +  +++    R G+LS+A +LL+ M   G
Sbjct: 876 IRD-HCKEGNLDKALMLRDVIVAKSAPMGCSSYLAIVDNLCRKGKLSEALNLLKEMDKRG 934

Query: 636 -LKPSL 640
            L+P+L
Sbjct: 935 NLQPTL 940



 Score =  111 bits (278), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 77/302 (25%), Positives = 142/302 (47%), Gaps = 1/302 (0%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           ++ G   +E TY+ ++    +     +  +L+ +M+  G +PN V Y  L+ SY +++ +
Sbjct: 529 QERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDI 588

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
            +    FK M   G   D   Y  LI   + +G ++ A  +   ++  G  PD   YS +
Sbjct: 589 EKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSGIEKNGSVPDVHVYSSL 648

Query: 472 INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF 531
           I+ L K    + A  +  EM  +G  PN+V YN +I    K+ +   A  ++  +   G 
Sbjct: 649 ISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGL 708

Query: 532 EPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWE 591
            P+ VTY+ +++     G +  A  ++ EM      PD  VY +L      AG++ +A  
Sbjct: 709 VPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLTTGCSSAGDLEQAMF 768

Query: 592 WYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCT 651
             E M   G   ++ + N+L+  F + G++ +   LL  ++  GL P+  T   ++S  +
Sbjct: 769 LIEEMFLRG-HASISSFNNLVDGFCKRGKMQETLKLLHVIMGRGLVPNALTIENIISGLS 827

Query: 652 EA 653
           EA
Sbjct: 828 EA 829



 Score = 88.6 bits (218), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 59/236 (25%), Positives = 104/236 (44%), Gaps = 35/236 (14%)

Query: 477 KAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKV 536
           K      A ++  EM  +GC  N VTYN++IA   ++   + A    +DM++ G  PD  
Sbjct: 234 KVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEEAFGFKKDMEDYGLVPDGF 293

Query: 537 TYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAM 596
           TY  ++  L      +EA+A+  EM      P+  VY  L+D + + GN  +A++  + M
Sbjct: 294 TYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGFMREGNADEAFKMIKEM 353

Query: 597 LQAGLRPNVPTCNSLLSAFLRVGQL----------------------------------- 621
           + AG++PN  T ++L+    ++GQ+                                   
Sbjct: 354 VAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLIIEGHFRHHSK 413

Query: 622 SDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGFCHELMAVSGHPAHMFL 677
            DA+ LL  M N G+ P++ TY++++    ++  P       E M   G   + F+
Sbjct: 414 KDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFV 469


>gi|449511130|ref|XP_004163870.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Cucumis sativus]
          Length = 847

 Score =  152 bits (384), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 98/340 (28%), Positives = 159/340 (46%), Gaps = 1/340 (0%)

Query: 310 WGPLAEEALGNTNYSMDAYQANQVLKQLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGI 369
           W    E  L     S++  Q   VL   +D   AL FF W  R   ++HD   Y  M+ I
Sbjct: 196 WNRKFEGELRYLVRSLNPLQVCAVLLSQEDERNALRFFYWADRLWRYRHDSSVYLVMLEI 255

Query: 370 LGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPD 429
           L + +      ++L  M R   Q     +  ++ SY RA  L +A+ V   MQ  G EP+
Sbjct: 256 LSKTKLCQGAKRILRLMTRRRIQLCPEAFGFVMVSYSRAGRLRDAMKVLTLMQKAGVEPN 315

Query: 430 RVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFC 489
                T I I      L  A+   ++M   G++P+  TY+ +I        +  A +L  
Sbjct: 316 LSICNTAIHILVMGNELKKALRFAERMVLIGIAPNVVTYNCLIKGYCNVHQVDQAMELID 375

Query: 490 EMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQ-NAGFEPDKVTYSIVMEVLGHC 548
           +M ++GC P+ V+Y  ++ L  + +      +L + MQ ++   PD VTY+ ++++L   
Sbjct: 376 QMPSKGCSPDKVSYYTVMGLLCRDKRLNEIRELIKKMQTDSKLLPDHVTYNSLIQMLSKH 435

Query: 549 GYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTC 608
           G+ DEA  +  E  +  +  D+  Y  +V  + K G ++KA E    M   G  P+V T 
Sbjct: 436 GHGDEALEILQEAEKLRFKVDKVEYSAIVHAYCKEGKIQKAKELVSEMFSKGCDPDVVTY 495

Query: 609 NSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
            S+L  F R+G+L  A  ++Q M     KP+  TYT  L+
Sbjct: 496 TSVLDGFCRIGKLDQAKKMMQQMYKHHCKPNAVTYTTFLN 535



 Score =  122 bits (305), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 84/296 (28%), Positives = 143/296 (48%), Gaps = 5/296 (1%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDG-CQPNVVTYNRLIHSYGRANYLNE 413
           G   D+ +Y T++G+L R ++   I +L+ +M  D    P+ VTYN LI    +  + +E
Sbjct: 381 GCSPDKVSYYTVMGLLCRDKRLNEIRELIKKMQTDSKLLPDHVTYNSLIQMLSKHGHGDE 440

Query: 414 ALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIIN 473
           AL++ ++ + +  + D+V Y  ++  + K G +  A ++  +M + G  PD  TY+ +++
Sbjct: 441 ALEILQEAEKLRFKVDKVEYSAIVHAYCKEGKIQKAKELVSEMFSKGCDPDVVTYTSVLD 500

Query: 474 CLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQS--ALKLYRDMQNAGF 531
              + G L  A ++  +M    C PN VTY     L    RN +S  A K+    +   +
Sbjct: 501 GFCRIGKLDQAKKMMQQMYKHHCKPNAVTYTTF--LNGLCRNGKSLEARKMMNMSEEEWW 558

Query: 532 EPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWE 591
            P+ +TYS+V+  L   G L+EA  V  EM  K + P+     LLV    + G  R+A +
Sbjct: 559 TPNAITYSVVVHGLRREGKLNEACDVVREMIGKGFFPNPVEINLLVHSLCRDGKPREANQ 618

Query: 592 WYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
             +  +  G   NV    +++  F +   L  A  LL  M      P   TYT L+
Sbjct: 619 LLKECMNKGCAVNVVNFTTVIHGFCQKDDLEAALSLLDDMYLCNKHPDTVTYTALI 674



 Score =  113 bits (283), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 72/268 (26%), Positives = 129/268 (48%)

Query: 356 FKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEAL 415
           FK D+  Y+ +V    +  +     +L+ +M   GC P+VVTY  ++  + R   L++A 
Sbjct: 453 FKVDKVEYSAIVHAYCKEGKIQKAKELVSEMFSKGCDPDVVTYTSVLDGFCRIGKLDQAK 512

Query: 416 DVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCL 475
            + +QM    C+P+ VTY T ++   + G    A  M    +    +P+  TYSV+++ L
Sbjct: 513 KMMQQMYKHHCKPNAVTYTTFLNGLCRNGKSLEARKMMNMSEEEWWTPNAITYSVVVHGL 572

Query: 476 GKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDK 535
            + G L  A  +  EM+ +G  PN V  N+++    +    + A +L ++  N G   + 
Sbjct: 573 RREGKLNEACDVVREMIGKGFFPNPVEINLLVHSLCRDGKPREANQLLKECMNKGCAVNV 632

Query: 536 VTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEA 595
           V ++ V+        L+ A ++  +M   N  PD   Y  L+D   K   + +A E    
Sbjct: 633 VNFTTVIHGFCQKDDLEAALSLLDDMYLCNKHPDTVTYTALIDALAKTDRIEEATELTMK 692

Query: 596 MLQAGLRPNVPTCNSLLSAFLRVGQLSD 623
           ML+ GL P+  T  S++  + R G++ D
Sbjct: 693 MLRQGLVPSPVTYRSVIHQYCRKGRVED 720



 Score =  108 bits (270), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 77/320 (24%), Positives = 140/320 (43%), Gaps = 33/320 (10%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           G   D  TYT+++    R  +     K++ QM +  C+PN VTY   ++   R     EA
Sbjct: 487 GCDPDVVTYTSVLDGFCRIGKLDQAKKMMQQMYKHHCKPNAVTYTTFLNGLCRNGKSLEA 546

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
             +    +     P+ +TY  ++    + G L+ A D+ ++M   G  P+    +++++ 
Sbjct: 547 RKMMNMSEEEWWTPNAITYSVVVHGLRREGKLNEACDVVREMIGKGFFPNPVEINLLVHS 606

Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPD 534
           L + G  + A+QL  E +N+GC  N+V +  +I    +  + ++AL L  DM      PD
Sbjct: 607 LCRDGKPREANQLLKECMNKGCAVNVVNFTTVIHGFCQKDDLEAALSLLDDMYLCNKHPD 666

Query: 535 KVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPD------------------------- 569
            VTY+ +++ L     ++EA  +  +M R+  VP                          
Sbjct: 667 TVTYTALIDALAKTDRIEEATELTMKMLRQGLVPSPVTYRSVIHQYCRKGRVEDLLKLLK 726

Query: 570 --------EPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQL 621
                   +  Y L+++   K G + +A      +L+   R +  TC+ L+ ++L VG  
Sbjct: 727 KMLLKSRFQTAYNLVIEKLCKFGYLEEANSLLGEVLRTASRTDAKTCHVLMESYLNVGIP 786

Query: 622 SDAYHLLQGMLNLGLKPSLQ 641
             AY +   M N  L P L+
Sbjct: 787 MSAYKVACRMFNRNLIPDLK 806



 Score = 93.2 bits (230), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 72/275 (26%), Positives = 125/275 (45%), Gaps = 4/275 (1%)

Query: 362 TYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQM 421
           TY+ +V  L R  +      ++ +M+  G  PN V  N L+HS  R     EA  + K+ 
Sbjct: 564 TYSVVVHGLRREGKLNEACDVVREMIGKGFFPNPVEINLLVHSLCRDGKPREANQLLKEC 623

Query: 422 QVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHL 481
              GC  + V + T+I    +   L+ A+ +   M      PDT TY+ +I+ L K   +
Sbjct: 624 MNKGCAVNVVNFTTVIHGFCQKDDLEAALSLLDDMYLCNKHPDTVTYTALIDALAKTDRI 683

Query: 482 QAAHQLFCEMVNQGCIPNLVTYNIMIALQA-KARNYQSALKLYRDMQNAGFEPDKVTYSI 540
           + A +L  +M+ QG +P+ VTY  +I     K R       L + +  + F+     Y++
Sbjct: 684 EEATELTMKMLRQGLVPSPVTYRSVIHQYCRKGRVEDLLKLLKKMLLKSRFQ---TAYNL 740

Query: 541 VMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAG 600
           V+E L   GYL+EA ++  E+ R     D     +L++ +   G    A++    M    
Sbjct: 741 VIEKLCKFGYLEEANSLLGEVLRTASRTDAKTCHVLMESYLNVGIPMSAYKVACRMFNRN 800

Query: 601 LRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLG 635
           L P++  C  +    +  G+L +A  L+   +  G
Sbjct: 801 LIPDLKLCEKVSKRLVVEGKLEEADRLVLRFVERG 835


>gi|115471647|ref|NP_001059422.1| Os07g0300200 [Oryza sativa Japonica Group]
 gi|34394343|dbj|BAC84898.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
 gi|50509027|dbj|BAD31989.1| putative fertility restorer [Oryza sativa Japonica Group]
 gi|113610958|dbj|BAF21336.1| Os07g0300200 [Oryza sativa Japonica Group]
          Length = 1013

 Score =  152 bits (384), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 125/471 (26%), Positives = 209/471 (44%), Gaps = 49/471 (10%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           G   D  TY  ++  L ++R+      LLD+M     +PNVV Y  LI  + R    +EA
Sbjct: 309 GLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGFMREGNADEA 368

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
             + K+M   G +P+++TY  L+    K G +D A  + K+M      PDT TY++II  
Sbjct: 369 FKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLIIEG 428

Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPD 534
             +    + A +L  EM N G  PN+ TY+IMI    ++   + A  L  +M   G +P+
Sbjct: 429 HFRHHSKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPN 488

Query: 535 KVTYSIVMEVLGHC--GYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEW 592
              Y+ ++   G+C  G +  A  +F +M + N +PD   Y  L+    K G V ++ ++
Sbjct: 489 AFVYAPLIS--GYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKY 546

Query: 593 YEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS---- 648
           +  M + GL PN  T + L+  +L+ G L  A  L+Q ML+ GLKP+   Y  LL     
Sbjct: 547 FAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFK 606

Query: 649 ------CCTEARSPYDMG----------FCHELMAVSGHPAHMFLLSMPSPGPDGQNVRD 692
                   +  +S  D G            H L +     A   +LS         +V  
Sbjct: 607 SDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSGIEKNGSVPDVHV 666

Query: 693 HVGSFLEMMHSEDRESKRGLVD---------------AVVDFLHKSGLKEEAGSVWEVAA 737
           +      +  + DRE   G++D               A++D L KSG         +++ 
Sbjct: 667 YSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSG---------DISY 717

Query: 738 QKNVYPDAVKEKGMSYWLINLHVMSDGTAVIALSRTLAWFRKQMLISGVGP 788
            +NV+ +++  KG+    +    + DG+  +       +   +ML +G+ P
Sbjct: 718 ARNVF-NSILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITP 767



 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 102/395 (25%), Positives = 181/395 (45%), Gaps = 1/395 (0%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
             AG   + +TY+ M+  L ++ +    + LL++M   G +PN   Y  LI  Y R   +
Sbjct: 446 ENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNV 505

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
           + A ++F +M  V   PD   Y +LI   +K G ++ +   + +MQ  GL P+ FTYS +
Sbjct: 506 SLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGL 565

Query: 472 INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF 531
           I+   K G L++A QL   M++ G  PN V Y  ++    K+ + +     ++ M + G 
Sbjct: 566 IHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGV 625

Query: 532 EPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWE 591
             D   Y I++  L   G ++ A  V + + +   VPD  VY  L+    K  +  KA+ 
Sbjct: 626 MLDNRIYGILIHNLSSSGNMEAAFRVLSGIEKNGSVPDVHVYSSLISGLCKTADREKAFG 685

Query: 592 WYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCT 651
             + M + G+ PN+   N+L+    + G +S A ++   +L  GL P+  TYT L+    
Sbjct: 686 ILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLVPNCVTYTSLIDGSC 745

Query: 652 EARSPYDMGFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRESKRG 711
           +     +  + +  M  +G     F+ S+ + G       +     +E M      S   
Sbjct: 746 KVGDISNAFYLYNEMLATGITPDAFVYSVLTTGCSSAGDLEQAMFLIEEMFLRGHASISS 805

Query: 712 LVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAV 746
             + +VD   K G  +E   +  V   + + P+A+
Sbjct: 806 F-NNLVDGFCKRGKMQETLKLLHVIMGRGLVPNAL 839



 Score =  135 bits (340), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 91/295 (30%), Positives = 141/295 (47%), Gaps = 11/295 (3%)

Query: 370 LGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPD 429
           L RA     + K+ + MV  G  P+V TY+ LI +Y +    + A  V  +M+  GC  +
Sbjct: 219 LLRADAMALLWKVREFMVGAGISPDVYTYSTLIEAYCKVREFDTAKKVLVEMRERGCGLN 278

Query: 430 RVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFC 489
            VTY  LI    ++G ++ A    K M+  GL PD FTY  +IN L K+     A  L  
Sbjct: 279 TVTYNVLIAGLCRSGAVEEAFGFKKDMEDYGLVPDGFTYGALINGLCKSRRSNEAKALLD 338

Query: 490 EMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCG 549
           EM      PN+V Y  +I    +  N   A K+ ++M  AG +P+K+TY  ++  L   G
Sbjct: 339 EMSCAELKPNVVVYANLIDGFMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMG 398

Query: 550 YLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCN 609
            +D A  +  +M R +  PD   Y L+++   +  + + A+     M  AG+ PNV T +
Sbjct: 399 QMDRASLLLKQMVRDSHRPDTITYNLIIEGHFRHHSKKDAFRLLSEMENAGISPNVYTYS 458

Query: 610 SLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGFCHE 664
            ++    + G+   A  LL+ M   GLKP+   Y  L+S           G+C E
Sbjct: 459 IMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLIS-----------GYCRE 502



 Score =  132 bits (332), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 86/296 (29%), Positives = 140/296 (47%), Gaps = 4/296 (1%)

Query: 354 AGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNE 413
           AG   D +TY+T++    + R+F    K+L +M   GC  N VTYN LI    R+  + E
Sbjct: 238 AGISPDVYTYSTLIEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEE 297

Query: 414 ALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIIN 473
           A    K M+  G  PD  TY  LI+   K+   + A  +  +M  A L P+   Y+ +I+
Sbjct: 298 AFGFKKDMEDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLID 357

Query: 474 CLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEP 533
              + G+   A ++  EMV  G  PN +TY+ ++    K      A  L + M      P
Sbjct: 358 GFMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRP 417

Query: 534 DKVTYSIVMEVLGHCGYLDEAEA--VFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWE 591
           D +TY++++E  GH  +  + +A  + +EM      P+   Y +++    ++G   KA +
Sbjct: 418 DTITYNLIIE--GHFRHHSKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASD 475

Query: 592 WYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
             E M   GL+PN      L+S + R G +S A  +   M  + + P L  Y  L+
Sbjct: 476 LLEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLI 531



 Score =  116 bits (291), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 87/313 (27%), Positives = 146/313 (46%), Gaps = 29/313 (9%)

Query: 359 DEHTYTTMVGIL----GRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           D H Y++++  L     R + FG    +LD+M + G  PN+V YN LI    ++  ++ A
Sbjct: 663 DVHVYSSLISGLCKTADREKAFG----ILDEMSKKGVDPNIVCYNALIDGLCKSGDISYA 718

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
            +VF  +   G  P+ VTY +LID   K G +  A  +Y +M A G++PD F YSV+   
Sbjct: 719 RNVFNSILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLTTG 778

Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPD 534
              AG L+ A  L  EM  +G   ++ ++N ++    K    Q  LKL   +   G  P+
Sbjct: 779 CSSAGDLEQAMFLIEEMFLRG-HASISSFNNLVDGFCKRGKMQETLKLLHVIMGRGLVPN 837

Query: 535 KVTYSIVMEVLGHCGYLDEAEAVFAEMRRKN-------------------WVPDEPVYGL 575
            +T   ++  L   G L E   +F E+++K                     +P + V  +
Sbjct: 838 ALTIENIISGLSEAGKLSEVHTIFVELQQKTSESAARHFSSLFMDMINQGKIPLDVVDDM 897

Query: 576 LVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLG 635
           + D   K GN+ KA    + ++         +  +++    R G+LS+A +LL+ M   G
Sbjct: 898 IRD-HCKEGNLDKALMLRDVIVAKSAPMGCSSYLAIVDNLCRKGKLSEALNLLKEMDKRG 956

Query: 636 LKPSLQTYTLLLS 648
           + PS     +LL+
Sbjct: 957 ICPSENQCLILLT 969



 Score =  110 bits (276), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 77/302 (25%), Positives = 142/302 (47%), Gaps = 1/302 (0%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           ++ G   +E TY+ ++    +     +  +L+ +M+  G +PN V Y  L+ SY +++ +
Sbjct: 551 QERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDI 610

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
            +    FK M   G   D   Y  LI   + +G ++ A  +   ++  G  PD   YS +
Sbjct: 611 EKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSGIEKNGSVPDVHVYSSL 670

Query: 472 INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF 531
           I+ L K    + A  +  EM  +G  PN+V YN +I    K+ +   A  ++  +   G 
Sbjct: 671 ISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGL 730

Query: 532 EPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWE 591
            P+ VTY+ +++     G +  A  ++ EM      PD  VY +L      AG++ +A  
Sbjct: 731 VPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLTTGCSSAGDLEQAMF 790

Query: 592 WYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCT 651
             E M   G   ++ + N+L+  F + G++ +   LL  ++  GL P+  T   ++S  +
Sbjct: 791 LIEEMFLRG-HASISSFNNLVDGFCKRGKMQETLKLLHVIMGRGLVPNALTIENIISGLS 849

Query: 652 EA 653
           EA
Sbjct: 850 EA 851



 Score = 87.4 bits (215), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 55/209 (26%), Positives = 106/209 (50%)

Query: 435 TLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQ 494
            L+D + K+G +  A ++   M+  G++P     + ++  L +A  +    ++   MV  
Sbjct: 179 VLVDTYKKSGRVQDAAEVVLMMRDRGMAPSIRCCNALLKDLLRADAMALLWKVREFMVGA 238

Query: 495 GCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEA 554
           G  P++ TY+ +I    K R + +A K+  +M+  G   + VTY++++  L   G ++EA
Sbjct: 239 GISPDVYTYSTLIEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEEA 298

Query: 555 EAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSA 614
                +M     VPD   YG L++   K+    +A    + M  A L+PNV    +L+  
Sbjct: 299 FGFKKDMEDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDG 358

Query: 615 FLRVGQLSDAYHLLQGMLNLGLKPSLQTY 643
           F+R G   +A+ +++ M+  G++P+  TY
Sbjct: 359 FMREGNADEAFKMIKEMVAAGVQPNKITY 387



 Score = 49.3 bits (116), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 25/83 (30%), Positives = 44/83 (53%)

Query: 572 VYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGM 631
           V  +LVD + K+G V+ A E    M   G+ P++  CN+LL   LR   ++  + + + M
Sbjct: 176 VLDVLVDTYKKSGRVQDAAEVVLMMRDRGMAPSIRCCNALLKDLLRADAMALLWKVREFM 235

Query: 632 LNLGLKPSLQTYTLLLSCCTEAR 654
           +  G+ P + TY+ L+    + R
Sbjct: 236 VGAGISPDVYTYSTLIEAYCKVR 258



 Score = 42.0 bits (97), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 44/188 (23%), Positives = 81/188 (43%), Gaps = 22/188 (11%)

Query: 462 SPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALK 521
           +PD F +  +  C G   +L  A+ L  +M+     P +V  +I                
Sbjct: 121 APDAFAHLAMSLCAGSLFNL--ANGLLIKMIRAYPSPPVVLASI---------------- 162

Query: 522 LYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPD-EPVYGLLVDLW 580
            +R + ++G     V   ++++     G + +A  V   MR +   P       LL DL 
Sbjct: 163 -HRALSDSGHRSPAV-LDVLVDTYKKSGRVQDAAEVVLMMRDRGMAPSIRCCNALLKDLL 220

Query: 581 GKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSL 640
            +A  +   W+  E M+ AG+ P+V T ++L+ A+ +V +   A  +L  M   G   + 
Sbjct: 221 -RADAMALLWKVREFMVGAGISPDVYTYSTLIEAYCKVREFDTAKKVLVEMRERGCGLNT 279

Query: 641 QTYTLLLS 648
            TY +L++
Sbjct: 280 VTYNVLIA 287


>gi|147788022|emb|CAN69338.1| hypothetical protein VITISV_032632 [Vitis vinifera]
          Length = 585

 Score =  152 bits (384), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 100/341 (29%), Positives = 162/341 (47%), Gaps = 8/341 (2%)

Query: 303 RILRQWKWGPLAEEALGNTNYSMDAYQANQVLKQLQDHTVALGFFNWLRRQAGFKHDEHT 362
           R+LR  + G    + +  T+      +  QV       T A   F+ +  Q G   D  T
Sbjct: 193 RLLRSMEQGNCQPDVVVYTSIIDSLCKDRQV-------TEAFNLFSKMVGQ-GISPDIFT 244

Query: 363 YTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQ 422
           YT+++  L    ++  +  LL+QM+     P+VV ++ ++ +  +   + EA DV   M 
Sbjct: 245 YTSLIHSLCNLCEWKHVTTLLNQMINSKIMPDVVIFSTVVDALCKEGKITEAHDVVDMMI 304

Query: 423 VVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQ 482
           + G EP+ VTY  L+D H     +D A+ ++  M   G +P+  +Y+ +IN   K   + 
Sbjct: 305 IRGVEPNVVTYNALMDGHCLQSEMDEAVKVFDTMVHNGYAPNVISYNTLINGYCKIQRMD 364

Query: 483 AAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVM 542
            A  LF EM  +  IPN VTYN ++         Q A+ L+ +M   G  PD  TY I++
Sbjct: 365 KATYLFEEMCQKELIPNTVTYNTLMHGLCHVGRLQDAIALFHEMVAHGQIPDLATYRILL 424

Query: 543 EVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLR 602
           + L    +LDEA A+   +   N  PD  +Y +++D   +AG +  A + +  +   GLR
Sbjct: 425 DYLCKKSHLDEAMALLKTIEGSNMDPDIQIYTIVIDGMCRAGELEAARDIFSNLSSKGLR 484

Query: 603 PNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTY 643
           PNV T   +++   R G L +A  L   M   G  P   TY
Sbjct: 485 PNVRTYTIMINGLCRRGLLDEANKLFMEMDGNGCSPDGCTY 525



 Score =  141 bits (356), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 86/289 (29%), Positives = 152/289 (52%)

Query: 359 DEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVF 418
           D   ++T+V  L +  +    + ++D M+  G +PNVVTYN L+  +   + ++EA+ VF
Sbjct: 276 DVVIFSTVVDALCKEGKITEAHDVVDMMIIRGVEPNVVTYNALMDGHCLQSEMDEAVKVF 335

Query: 419 KQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKA 478
             M   G  P+ ++Y TLI+ + K   +D A  ++++M    L P+T TY+ +++ L   
Sbjct: 336 DTMVHNGYAPNVISYNTLINGYCKIQRMDKATYLFEEMCQKELIPNTVTYNTLMHGLCHV 395

Query: 479 GHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTY 538
           G LQ A  LF EMV  G IP+L TY I++    K  +   A+ L + ++ +  +PD   Y
Sbjct: 396 GRLQDAIALFHEMVAHGQIPDLATYRILLDYLCKKSHLDEAMALLKTIEGSNMDPDIQIY 455

Query: 539 SIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQ 598
           +IV++ +   G L+ A  +F+ +  K   P+   Y ++++   + G + +A + +  M  
Sbjct: 456 TIVIDGMCRAGELEAARDIFSNLSSKGLRPNVRTYTIMINGLCRRGLLDEANKLFMEMDG 515

Query: 599 AGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
            G  P+  T N++    L+  +   A  LLQ ML  G    + T TLL+
Sbjct: 516 NGCSPDGCTYNTITQGLLQNKEALRAIQLLQEMLARGFSADVSTTTLLV 564



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 100/396 (25%), Positives = 172/396 (43%), Gaps = 74/396 (18%)

Query: 326 DAYQANQVLKQLQDHTVALGF-FNWLRR--QAGFKHDEHTYTTMVGILGRARQFGAINKL 382
           D Y  N ++     H    GF F+ L +  + G + D  T+TT++  L    + G    L
Sbjct: 101 DVYTLNILINSFC-HLNRPGFAFSVLAKILKLGLQPDTATFTTLIRGLCVEGKIGDALHL 159

Query: 383 LDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAK 442
            D+M+ +G QPNVVTY  LI+   +    N A+ + + M+   C+PD V Y ++ID   K
Sbjct: 160 FDKMIGEGFQPNVVTYGTLINGLCKVGNTNAAIRLLRSMEQGNCQPDVVVYTSIIDSLCK 219

Query: 443 AGFLDVAMDMYKKMQAAGLSPDTFTY---------------------------------- 468
              +  A +++ KM   G+SPD FTY                                  
Sbjct: 220 DRQVTEAFNLFSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMINSKIMPDVVI 279

Query: 469 -SVIINCLGKAGHLQAAH-----------------------------------QLFCEMV 492
            S +++ L K G +  AH                                   ++F  MV
Sbjct: 280 FSTVVDALCKEGKITEAHDVVDMMIIRGVEPNVVTYNALMDGHCLQSEMDEAVKVFDTMV 339

Query: 493 NQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLD 552
           + G  PN+++YN +I    K +    A  L+ +M      P+ VTY+ +M  L H G L 
Sbjct: 340 HNGYAPNVISYNTLINGYCKIQRMDKATYLFEEMCQKELIPNTVTYNTLMHGLCHVGRLQ 399

Query: 553 EAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLL 612
           +A A+F EM     +PD   Y +L+D   K  ++ +A    + +  + + P++     ++
Sbjct: 400 DAIALFHEMVAHGQIPDLATYRILLDYLCKKSHLDEAMALLKTIEGSNMDPDIQIYTIVI 459

Query: 613 SAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
               R G+L  A  +   + + GL+P+++TYT++++
Sbjct: 460 DGMCRAGELEAARDIFSNLSSKGLRPNVRTYTIMIN 495



 Score =  131 bits (329), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 92/328 (28%), Positives = 141/328 (42%), Gaps = 35/328 (10%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           G   D +T   ++       + G    +L ++++ G QP+  T+  LI        + +A
Sbjct: 97  GIPPDVYTLNILINSFCHLNRPGFAFSVLAKILKLGLQPDTATFTTLIRGLCVEGKIGDA 156

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
           L +F +M   G +P+ VTY TLI+   K G  + A+ + + M+     PD   Y+ II+ 
Sbjct: 157 LHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTNAAIRLLRSMEQGNCQPDVVVYTSIIDS 216

Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPD 534
           L K   +  A  LF +MV QG  P++ TY  +I        ++    L   M N+   PD
Sbjct: 217 LCKDRQVTEAFNLFSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMINSKIMPD 276

Query: 535 KVTYSIVMEVL---------------------------------GHC--GYLDEAEAVFA 559
            V +S V++ L                                 GHC    +DEA  VF 
Sbjct: 277 VVIFSTVVDALCKEGKITEAHDVVDMMIIRGVEPNVVTYNALMDGHCLQSEMDEAVKVFD 336

Query: 560 EMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVG 619
            M    + P+   Y  L++ + K   + KA   +E M Q  L PN  T N+L+     VG
Sbjct: 337 TMVHNGYAPNVISYNTLINGYCKIQRMDKATYLFEEMCQKELIPNTVTYNTLMHGLCHVG 396

Query: 620 QLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
           +L DA  L   M+  G  P L TY +LL
Sbjct: 397 RLQDAIALFHEMVAHGQIPDLATYRILL 424



 Score =  128 bits (322), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 77/279 (27%), Positives = 132/279 (47%)

Query: 370 LGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPD 429
           + + +Q+  +  L +QM   G  P+V T N LI+S+   N    A  V  ++  +G +PD
Sbjct: 77  IAKTKQYPTVFSLSNQMDSFGIPPDVYTLNILINSFCHLNRPGFAFSVLAKILKLGLQPD 136

Query: 430 RVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFC 489
             T+ TLI      G +  A+ ++ KM   G  P+  TY  +IN L K G+  AA +L  
Sbjct: 137 TATFTTLIRGLCVEGKIGDALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTNAAIRLLR 196

Query: 490 EMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCG 549
            M    C P++V Y  +I    K R    A  L+  M   G  PD  TY+ ++  L +  
Sbjct: 197 SMEQGNCQPDVVVYTSIIDSLCKDRQVTEAFNLFSKMVGQGISPDIFTYTSLIHSLCNLC 256

Query: 550 YLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCN 609
                  +  +M     +PD  ++  +VD   K G + +A +  + M+  G+ PNV T N
Sbjct: 257 EWKHVTTLLNQMINSKIMPDVVIFSTVVDALCKEGKITEAHDVVDMMIIRGVEPNVVTYN 316

Query: 610 SLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
           +L+       ++ +A  +   M++ G  P++ +Y  L++
Sbjct: 317 ALMDGHCLQSEMDEAVKVFDTMVHNGYAPNVISYNTLIN 355



 Score =  109 bits (273), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 68/231 (29%), Positives = 113/231 (48%), Gaps = 10/231 (4%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           G+  +  +Y T++    + ++      L ++M +    PN VTYN L+H       L +A
Sbjct: 342 GYAPNVISYNTLINGYCKIQRMDKATYLFEEMCQKELIPNTVTYNTLMHGLCHVGRLQDA 401

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
           + +F +M   G  PD  TY  L+D   K   LD AM + K ++ + + PD   Y+++I+ 
Sbjct: 402 IALFHEMVAHGQIPDLATYRILLDYLCKKSHLDEAMALLKTIEGSNMDPDIQIYTIVIDG 461

Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPD 534
           + +AG L+AA  +F  + ++G  PN+ TY IMI    +      A KL+ +M   G  PD
Sbjct: 462 MCRAGELEAARDIFSNLSSKGLRPNVRTYTIMINGLCRRGLLDEANKLFMEMDGNGCSPD 521

Query: 535 KVTYSIVMEVLGHCGYLDEAEAVFA-----EMRRKNWVPDEPVYGLLVDLW 580
             TY+ + +     G L   EA+ A     EM  + +  D     LLV++ 
Sbjct: 522 GCTYNTITQ-----GLLQNKEALRAIQLLQEMLARGFSADVSTTTLLVEML 567



 Score =  107 bits (267), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 67/255 (26%), Positives = 122/255 (47%)

Query: 393 PNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDM 452
           P+ V +NRL+ S  +         +  QM   G  PD  T   LI+          A  +
Sbjct: 65  PSTVDFNRLLTSIAKTKQYPTVFSLSNQMDSFGIPPDVYTLNILINSFCHLNRPGFAFSV 124

Query: 453 YKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAK 512
             K+   GL PDT T++ +I  L   G +  A  LF +M+ +G  PN+VTY  +I    K
Sbjct: 125 LAKILKLGLQPDTATFTTLIRGLCVEGKIGDALHLFDKMIGEGFQPNVVTYGTLINGLCK 184

Query: 513 ARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPV 572
             N  +A++L R M+    +PD V Y+ +++ L     + EA  +F++M  +   PD   
Sbjct: 185 VGNTNAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTEAFNLFSKMVGQGISPDIFT 244

Query: 573 YGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGML 632
           Y  L+         +        M+ + + P+V   ++++ A  + G++++A+ ++  M+
Sbjct: 245 YTSLIHSLCNLCEWKHVTTLLNQMINSKIMPDVVIFSTVVDALCKEGKITEAHDVVDMMI 304

Query: 633 NLGLKPSLQTYTLLL 647
             G++P++ TY  L+
Sbjct: 305 IRGVEPNVVTYNALM 319



 Score = 90.5 bits (223), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 82/378 (21%), Positives = 156/378 (41%), Gaps = 12/378 (3%)

Query: 396 VTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKK 455
           +++NR        N L++AL  F +M  +   P  V +  L+   AK         +  +
Sbjct: 33  LSHNRFHSKSLNFNTLDDALSSFNRMLHMHPPPSTVDFNRLLTSIAKTKQYPTVFSLSNQ 92

Query: 456 MQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARN 515
           M + G+ PD +T +++IN          A  +  +++  G  P+  T+  +I        
Sbjct: 93  MDSFGIPPDVYTLNILINSFCHLNRPGFAFSVLAKILKLGLQPDTATFTTLIRGLCVEGK 152

Query: 516 YQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGL 575
              AL L+  M   GF+P+ VTY  ++  L   G  + A  +   M + N  PD  VY  
Sbjct: 153 IGDALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTNAAIRLLRSMEQGNCQPDVVVYTS 212

Query: 576 LVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLG 635
           ++D   K   V +A+  +  M+  G+ P++ T  SL+ +   + +      LL  M+N  
Sbjct: 213 IIDSLCKDRQVTEAFNLFSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMINSK 272

Query: 636 LKPSLQTY-TLLLSCC-----TEARSPYDMGFCHELMAVSGHPAHMFLLSMPSPGPDGQN 689
           + P +  + T++ + C     TEA    DM      M + G   ++   +    G   Q+
Sbjct: 273 IMPDVVIFSTVVDALCKEGKITEAHDVVDM------MIIRGVEPNVVTYNALMDGHCLQS 326

Query: 690 VRDHVGSFLEMMHSEDRESKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAVKEK 749
             D      + M            + +++   K    ++A  ++E   QK + P+ V   
Sbjct: 327 EMDEAVKVFDTMVHNGYAPNVISYNTLINGYCKIQRMDKATYLFEEMCQKELIPNTVTYN 386

Query: 750 GMSYWLINLHVMSDGTAV 767
            + + L ++  + D  A+
Sbjct: 387 TLMHGLCHVGRLQDAIAL 404



 Score = 59.3 bits (142), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 48/184 (26%), Positives = 79/184 (42%), Gaps = 4/184 (2%)

Query: 336 QLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNV 395
           +LQD   A+  F+ +    G   D  TY  ++  L +         LL  +      P++
Sbjct: 397 RLQD---AIALFHEMVAH-GQIPDLATYRILLDYLCKKSHLDEAMALLKTIEGSNMDPDI 452

Query: 396 VTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKK 455
             Y  +I    RA  L  A D+F  +   G  P+  TY  +I+   + G LD A  ++ +
Sbjct: 453 QIYTIVIDGMCRAGELEAARDIFSNLSSKGLRPNVRTYTIMINGLCRRGLLDEANKLFME 512

Query: 456 MQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARN 515
           M   G SPD  TY+ I   L +      A QL  EM+ +G   ++ T  +++ +    + 
Sbjct: 513 MDGNGCSPDGCTYNTITQGLLQNKEALRAIQLLQEMLARGFSADVSTTTLLVEMLCDDKL 572

Query: 516 YQSA 519
            QS 
Sbjct: 573 DQSV 576


>gi|356499327|ref|XP_003518493.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
           mitochondrial-like [Glycine max]
          Length = 725

 Score =  152 bits (384), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 94/287 (32%), Positives = 147/287 (51%), Gaps = 1/287 (0%)

Query: 363 YTTMV-GILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQM 421
           Y T++ G +   R   A + L + MV  G +P+  T+N +I    +  YL  AL++  +M
Sbjct: 344 YNTLISGYVASGRFEEAKDLLYNNMVIAGYEPDAYTFNIMIDGLVKKGYLVSALELLNEM 403

Query: 422 QVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHL 481
                EP+ +TY  LI+   K G L+ A ++   M A GLS +T  Y+ +I  L K G++
Sbjct: 404 VAKRFEPNVITYTILINGFCKQGRLEEAAEIVNSMSAKGLSLNTVGYNCLICALCKDGNI 463

Query: 482 QAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIV 541
           + A QLF EM  +GC P++ T+N +I    K    + AL LY DM   G   + VTY+ +
Sbjct: 464 EEALQLFGEMSGKGCKPDIYTFNSLINGLCKNHKMEEALSLYHDMFLEGVIANTVTYNTL 523

Query: 542 MEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGL 601
           +        + +A  +  EM  +    D   Y  L+    K G V K    +E ML  G+
Sbjct: 524 VHAFLMRDSIQQAFKLVDEMLFRGCPLDNITYNGLIKALCKTGAVEKGLGLFEEMLGKGI 583

Query: 602 RPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
            P + +CN L+S   R G+++DA   LQ M++ GL P + TY  L++
Sbjct: 584 FPTIISCNILISGLCRTGKVNDALKFLQDMIHRGLTPDIVTYNSLIN 630



 Score =  143 bits (361), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 85/295 (28%), Positives = 152/295 (51%)

Query: 354 AGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNE 413
           AG++ D +T+  M+  L +     +  +LL++MV    +PNV+TY  LI+ + +   L E
Sbjct: 371 AGYEPDAYTFNIMIDGLVKKGYLVSALELLNEMVAKRFEPNVITYTILINGFCKQGRLEE 430

Query: 414 ALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIIN 473
           A ++   M   G   + V Y  LI    K G ++ A+ ++ +M   G  PD +T++ +IN
Sbjct: 431 AAEIVNSMSAKGLSLNTVGYNCLICALCKDGNIEEALQLFGEMSGKGCKPDIYTFNSLIN 490

Query: 474 CLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEP 533
            L K   ++ A  L+ +M  +G I N VTYN ++       + Q A KL  +M   G   
Sbjct: 491 GLCKNHKMEEALSLYHDMFLEGVIANTVTYNTLVHAFLMRDSIQQAFKLVDEMLFRGCPL 550

Query: 534 DKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWY 593
           D +TY+ +++ L   G +++   +F EM  K   P      +L+    + G V  A ++ 
Sbjct: 551 DNITYNGLIKALCKTGAVEKGLGLFEEMLGKGIFPTIISCNILISGLCRTGKVNDALKFL 610

Query: 594 EAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
           + M+  GL P++ T NSL++   ++G + +A +L   + + G++P   TY  L+S
Sbjct: 611 QDMIHRGLTPDIVTYNSLINGLCKMGHVQEASNLFNKLQSEGIRPDAITYNTLIS 665



 Score =  133 bits (334), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 108/396 (27%), Positives = 180/396 (45%), Gaps = 19/396 (4%)

Query: 359 DEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVF 418
           D  T+  ++  L RA +     KLLD+M+  G   + +TY  L+H   R   ++EA  + 
Sbjct: 274 DVQTFNDVIHGLCRAGRIHEAAKLLDRMLLRGFSTDALTYGYLMHGLCRMGQVDEARALL 333

Query: 419 KQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDM-YKKMQAAGLSPDTFTYSVIINCLGK 477
            ++      P+ V Y TLI  +  +G  + A D+ Y  M  AG  PD +T++++I+ L K
Sbjct: 334 NKIP----NPNTVLYNTLISGYVASGRFEEAKDLLYNNMVIAGYEPDAYTFNIMIDGLVK 389

Query: 478 AGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVT 537
            G+L +A +L  EMV +   PN++TY I+I    K    + A ++   M   G   + V 
Sbjct: 390 KGYLVSALELLNEMVAKRFEPNVITYTILINGFCKQGRLEEAAEIVNSMSAKGLSLNTVG 449

Query: 538 YSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAML 597
           Y+ ++  L   G ++EA  +F EM  K   PD   +  L++   K   + +A   Y  M 
Sbjct: 450 YNCLICALCKDGNIEEALQLFGEMSGKGCKPDIYTFNSLINGLCKNHKMEEALSLYHDMF 509

Query: 598 QAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYT-LLLSCCTEARSP 656
             G+  N  T N+L+ AFL    +  A+ L+  ML  G      TY  L+ + C      
Sbjct: 510 LEGVIANTVTYNTLVHAFLMRDSIQQAFKLVDEMLFRGCPLDNITYNGLIKALCKTGAVE 569

Query: 657 YDMGFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRESKRGLVDAV 716
             +G   E++     P  +    + S       V D +    +M+H       RGL   +
Sbjct: 570 KGLGLFEEMLGKGIFPTIISCNILISGLCRTGKVNDALKFLQDMIH-------RGLTPDI 622

Query: 717 VDF------LHKSGLKEEAGSVWEVAAQKNVYPDAV 746
           V +      L K G  +EA +++     + + PDA+
Sbjct: 623 VTYNSLINGLCKMGHVQEASNLFNKLQSEGIRPDAI 658



 Score =  125 bits (314), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 85/328 (25%), Positives = 157/328 (47%), Gaps = 2/328 (0%)

Query: 323 YSMDAYQANQVLKQLQDHTVALGFFNWLRRQAG--FKHDEHTYTTMVGILGRARQFGAIN 380
           Y  DAY  N ++  L      +     L       F+ +  TYT ++    +  +     
Sbjct: 373 YEPDAYTFNIMIDGLVKKGYLVSALELLNEMVAKRFEPNVITYTILINGFCKQGRLEEAA 432

Query: 381 KLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIH 440
           ++++ M   G   N V YN LI +  +   + EAL +F +M   GC+PD  T+ +LI+  
Sbjct: 433 EIVNSMSAKGLSLNTVGYNCLICALCKDGNIEEALQLFGEMSGKGCKPDIYTFNSLINGL 492

Query: 441 AKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNL 500
            K   ++ A+ +Y  M   G+  +T TY+ +++       +Q A +L  EM+ +GC  + 
Sbjct: 493 CKNHKMEEALSLYHDMFLEGVIANTVTYNTLVHAFLMRDSIQQAFKLVDEMLFRGCPLDN 552

Query: 501 VTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAE 560
           +TYN +I    K    +  L L+ +M   G  P  ++ +I++  L   G +++A     +
Sbjct: 553 ITYNGLIKALCKTGAVEKGLGLFEEMLGKGIFPTIISCNILISGLCRTGKVNDALKFLQD 612

Query: 561 MRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQ 620
           M  +   PD   Y  L++   K G+V++A   +  +   G+RP+  T N+L+S     G 
Sbjct: 613 MIHRGLTPDIVTYNSLINGLCKMGHVQEASNLFNKLQSEGIRPDAITYNTLISRHCHEGM 672

Query: 621 LSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
            +DA  LL   ++ G  P+  T+++L++
Sbjct: 673 FNDACLLLYKGVDSGFIPNEVTWSILIN 700



 Score =  114 bits (284), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 84/322 (26%), Positives = 143/322 (44%), Gaps = 6/322 (1%)

Query: 328 YQANQVLKQLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMV 387
           +Q  ++L+   D   ++  F     Q G+ H       ++  LG    F  I KLL QM 
Sbjct: 67  FQLCKLLELPLDIPTSMELFQRAGAQKGYSHTFDACYLLIDKLGAVGDFKVIEKLLKQMK 126

Query: 388 RDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQM-QVVGCEPDRVTYCTLIDIHAKAGFL 446
            +G       +  ++  YG+A    +A  +   M  V  C+P   +Y  ++DI       
Sbjct: 127 DEGLLFKESLFILIMKHYGKAGLPGQATRLLLDMWGVYSCDPTFKSYNVVLDILVDGDCP 186

Query: 447 DVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIM 506
            VA +++  M + G+SP  +T+ V++  L     + +A  L  +M   GC+PN V Y  +
Sbjct: 187 RVAPNVFYDMLSRGVSPTVYTFGVVMKALCMVSEVDSACSLLRDMAKHGCVPNSVIYQTL 246

Query: 507 IALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNW 566
           I    +      AL+L  DM     EPD  T++ V+  L   G + EA  +   M  + +
Sbjct: 247 IHALCENNRVSEALQLLEDMFLMCCEPDVQTFNDVIHGLCRAGRIHEAAKLLDRMLLRGF 306

Query: 567 VPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYH 626
             D   YG L+    + G V +A     A+L     PN    N+L+S ++  G+  +A  
Sbjct: 307 STDALTYGYLMHGLCRMGQVDEA----RALLNKIPNPNTVLYNTLISGYVASGRFEEAKD 362

Query: 627 LL-QGMLNLGLKPSLQTYTLLL 647
           LL   M+  G +P   T+ +++
Sbjct: 363 LLYNNMVIAGYEPDAYTFNIMI 384



 Score = 67.4 bits (163), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 36/98 (36%), Positives = 57/98 (58%), Gaps = 2/98 (2%)

Query: 381 KLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIH 440
           K L  M+  G  P++VTYN LI+   +  ++ EA ++F ++Q  G  PD +TY TLI  H
Sbjct: 608 KFLQDMIHRGLTPDIVTYNSLINGLCKMGHVQEASNLFNKLQSEGIRPDAITYNTLISRH 667

Query: 441 AKAG-FLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGK 477
              G F D  + +YK +  +G  P+  T+S++IN + K
Sbjct: 668 CHEGMFNDACLLLYKGVD-SGFIPNEVTWSILINYIVK 704


>gi|224713522|gb|ACN62068.1| PPR-814b [Zea mays]
          Length = 814

 Score =  152 bits (384), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 88/295 (29%), Positives = 151/295 (51%)

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
           Q G   D  TY+++V  L +AR        L QMV  G  PN  TYN LI+ Y       
Sbjct: 247 QRGIPPDFVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPNNWTYNNLIYGYSSTGQWK 306

Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
           EA+ VFK+M+     PD VT   L+    K G +  A D++  M   G +P+ F+Y++++
Sbjct: 307 EAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPNVFSYTIML 366

Query: 473 NCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFE 532
           N     G L     LF  M+  G  P++ T+N++I   A       A+ ++ +M++ G +
Sbjct: 367 NGYATKGCLVDMTDLFDLMLGDGIAPDIYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVK 426

Query: 533 PDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEW 592
           PD VTY  V+  L   G +D+A   F +M  +   PD+  Y  L+  +   G++ KA E 
Sbjct: 427 PDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKEL 486

Query: 593 YEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
              ++  G+  ++   +S+++   ++G++ DA ++    +N+GL P+   Y++L+
Sbjct: 487 ISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPTAVVYSMLM 541



 Score =  144 bits (364), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 125/492 (25%), Positives = 227/492 (46%), Gaps = 40/492 (8%)

Query: 342 VALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRL 401
           +AL FF  L R     +       + G     R   A++ LL +    GC P+V +Y+ L
Sbjct: 129 LALAFFGQLLRTGLRVNIIIANHLLKGFCEAKRTDEALDILLHRTPELGCVPDVFSYSIL 188

Query: 402 IHSYGRANYLNEALDVFKQMQVVG--CEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAA 459
           + S        +A D+ + M   G  C PD V Y T+ID   K G ++ A D++K+M   
Sbjct: 189 LKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYSTVIDGFFKEGDVNKACDLFKEMVQR 248

Query: 460 GLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSA 519
           G+ PD  TYS +++ L KA  +  A     +MVN+G +PN  TYN +I   +    ++ A
Sbjct: 249 GIPPDFVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPNNWTYNNLIYGYSSTGQWKEA 308

Query: 520 LKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDL 579
           ++++++M+     PD VT S++M  L   G + EA  VF  M  K   P+   Y ++++ 
Sbjct: 309 VRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPNVFSYTIMLNG 368

Query: 580 WGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPS 639
           +   G +    + ++ ML  G+ P++ T N L+ A+   G L  A  +   M + G+KP 
Sbjct: 369 YATKGCLVDMTDLFDLMLGDGIAPDIYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPD 428

Query: 640 LQTY-TLLLSCCTEARSPYDMGFCHELM----AVSGHPAHMFLLSMPSPGPDGQNVRDHV 694
           + TY T++ + C   +    M   ++++    A   +  H  +          Q    H 
Sbjct: 429 VVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLI----------QGFCTH- 477

Query: 695 GSFLEMMHSEDRESKRGL------VDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAVKE 748
           GS L+           G+        ++++ L K G   +A +++++     ++P AV  
Sbjct: 478 GSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPTAVV- 536

Query: 749 KGMSYWLINLHVMSDGTAVIA-LSRTLAWFRKQMLISGVGPSRI---DIVTGWGRRSRV- 803
                      ++ DG  ++  + + L  F   M+ +G+ P+ +    +V G+ +  R+ 
Sbjct: 537 ---------YSMLMDGYCLVGKMEKALRVF-DAMVSAGIEPNDVVYGTLVNGYCKIGRID 586

Query: 804 TGTSLVRQAVQE 815
            G SL R+ +Q+
Sbjct: 587 EGLSLFREMLQK 598



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 106/393 (26%), Positives = 180/393 (45%), Gaps = 18/393 (4%)

Query: 362 TYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQM 421
           +YT M+           +  L D M+ DG  P++ T+N LI +Y     L++A+ +F +M
Sbjct: 361 SYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFNVLIKAYANCGMLDKAMIIFNEM 420

Query: 422 QVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHL 481
           +  G +PD VTY T+I    + G +D AM+ + +M   G++PD + Y  +I      G L
Sbjct: 421 RDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSL 480

Query: 482 QAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIV 541
             A +L  E++N G   ++V ++ +I    K      A  ++    N G  P  V YS++
Sbjct: 481 LKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPTAVVYSML 540

Query: 542 MEVLGHC--GYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQA 599
           M+  G+C  G +++A  VF  M      P++ VYG LV+ + K G + +    +  MLQ 
Sbjct: 541 MD--GYCLVGKMEKALRVFDAMVSAGIEPNDVVYGTLVNGYCKIGRIDEGLSLFREMLQK 598

Query: 600 GLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDM 659
           G++P+    N ++      G+   A      M   G+  +  TY ++L    + R   + 
Sbjct: 599 GIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYNIVLRGLFKNRCFDEA 658

Query: 660 GFC-HELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRESKRGLVDAVVD 718
            F   EL A++     + L +M +     + V +    F  +       S+ GLV  VV 
Sbjct: 659 IFLFKELRAMNVKINIITLNTMIAGMFQTRRVEEAKDLFASI-------SRSGLVPCVVT 711

Query: 719 F------LHKSGLKEEAGSVWEVAAQKNVYPDA 745
           +      L K GL EEA  ++         PD+
Sbjct: 712 YSIMITNLIKEGLVEEAEDMFSSMQNAGCEPDS 744



 Score =  115 bits (289), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 70/270 (25%), Positives = 131/270 (48%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           G   D   +++++  L +  +      + D  V  G  P  V Y+ L+  Y     + +A
Sbjct: 494 GMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPTAVVYSMLMDGYCLVGKMEKA 553

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
           L VF  M   G EP+ V Y TL++ + K G +D  + ++++M   G+ P T  Y++II+ 
Sbjct: 554 LRVFDAMVSAGIEPNDVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDG 613

Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPD 534
           L +AG    A   F EM   G   N  TYNI++    K R +  A+ L+++++    + +
Sbjct: 614 LFEAGRTVPAKVKFHEMTESGIAMNKCTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKIN 673

Query: 535 KVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYE 594
            +T + ++  +     ++EA+ +FA + R   VP    Y +++    K G V +A + + 
Sbjct: 674 IITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCVVTYSIMITNLIKEGLVEEAEDMFS 733

Query: 595 AMLQAGLRPNVPTCNSLLSAFLRVGQLSDA 624
           +M  AG  P+    N ++   L+  ++  A
Sbjct: 734 SMQNAGCEPDSRLLNHVVRELLKKNEIVRA 763



 Score =  105 bits (261), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 75/326 (23%), Positives = 150/326 (46%), Gaps = 4/326 (1%)

Query: 326 DAYQANQVLKQLQDHTV---ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKL 382
           D Y  N ++K   +  +   A+  FN +R   G K D  TY T++  L R  +     + 
Sbjct: 393 DIYTFNVLIKAYANCGMLDKAMIIFNEMRDH-GVKPDVVTYRTVIAALCRIGKMDDAMEK 451

Query: 383 LDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAK 442
            +QM+  G  P+   Y+ LI  +     L +A ++  ++   G   D V + ++I+   K
Sbjct: 452 FNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCK 511

Query: 443 AGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVT 502
            G +  A +++      GL P    YS++++     G ++ A ++F  MV+ G  PN V 
Sbjct: 512 LGRVMDAQNIFDLTVNVGLHPTAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNDVV 571

Query: 503 YNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMR 562
           Y  ++    K       L L+R+M   G +P  + Y+I+++ L   G    A+  F EM 
Sbjct: 572 YGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMT 631

Query: 563 RKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLS 622
                 ++  Y +++    K     +A   ++ +    ++ N+ T N++++   +  ++ 
Sbjct: 632 ESGIAMNKCTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIAGMFQTRRVE 691

Query: 623 DAYHLLQGMLNLGLKPSLQTYTLLLS 648
           +A  L   +   GL P + TY+++++
Sbjct: 692 EAKDLFASISRSGLVPCVVTYSIMIT 717



 Score =  100 bits (249), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 75/312 (24%), Positives = 131/312 (41%), Gaps = 36/312 (11%)

Query: 361 HTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQ 420
           HTY  ++    RA +         Q++R G + N++  N L+  +  A   +EALD+   
Sbjct: 112 HTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLKGFCEAKRTDEALDI--- 168

Query: 421 MQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGH 480
                                          +  +    G  PD F+YS+++  L   G 
Sbjct: 169 -------------------------------LLHRTPELGCVPDVFSYSILLKSLCDQGK 197

Query: 481 LQAAHQLFCEMVNQG--CIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTY 538
              A  L   M   G  C P++V Y+ +I    K  +   A  L+++M   G  PD VTY
Sbjct: 198 SGQADDLLRMMAEGGAVCSPDVVAYSTVIDGFFKEGDVNKACDLFKEMVQRGIPPDFVTY 257

Query: 539 SIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQ 598
           S V+  L     +D+AEA   +M  K  +P+   Y  L+  +   G  ++A   ++ M +
Sbjct: 258 SSVVHALCKARAMDKAEAFLRQMVNKGVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRR 317

Query: 599 AGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYD 658
             + P+V T + L+ +  + G++ +A  +   M   G  P++ +YT++L+         D
Sbjct: 318 HSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPNVFSYTIMLNGYATKGCLVD 377

Query: 659 MGFCHELMAVSG 670
           M    +LM   G
Sbjct: 378 MTDLFDLMLGDG 389



 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 62/250 (24%), Positives = 110/250 (44%), Gaps = 35/250 (14%)

Query: 381 KLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLID-- 438
           ++ D MV  G +PN V Y  L++ Y +   ++E L +F++M   G +P  + Y  +ID  
Sbjct: 555 RVFDAMVSAGIEPNDVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGL 614

Query: 439 ------IHAKAGF---------------------------LDVAMDMYKKMQAAGLSPDT 465
                 + AK  F                            D A+ ++K+++A  +  + 
Sbjct: 615 FEAGRTVPAKVKFHEMTESGIAMNKCTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINI 674

Query: 466 FTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRD 525
            T + +I  + +   ++ A  LF  +   G +P +VTY+IMI    K    + A  ++  
Sbjct: 675 ITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCVVTYSIMITNLIKEGLVEEAEDMFSS 734

Query: 526 MQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGN 585
           MQNAG EPD    + V+  L     +  A A  +++  +N+  +     LLVDL+   G 
Sbjct: 735 MQNAGCEPDSRLLNHVVRELLKKNEIVRAGAYLSKIDERNFSLEHLTTMLLVDLFSSKGT 794

Query: 586 VRKAWEWYEA 595
            R+   +  A
Sbjct: 795 CREHIRFLPA 804



 Score = 77.0 bits (188), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 52/190 (27%), Positives = 96/190 (50%), Gaps = 3/190 (1%)

Query: 461 LSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSAL 520
           LSP + TY+++++C  +A   + A   F +++  G   N++  N ++    +A+    AL
Sbjct: 107 LSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLKGFCEAKRTDEAL 166

Query: 521 K-LYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWV--PDEPVYGLLV 577
             L       G  PD  +YSI+++ L   G   +A+ +   M     V  PD   Y  ++
Sbjct: 167 DILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYSTVI 226

Query: 578 DLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLK 637
           D + K G+V KA + ++ M+Q G+ P+  T +S++ A  +   +  A   L+ M+N G+ 
Sbjct: 227 DGFFKEGDVNKACDLFKEMVQRGIPPDFVTYSSVVHALCKARAMDKAEAFLRQMVNKGVL 286

Query: 638 PSLQTYTLLL 647
           P+  TY  L+
Sbjct: 287 PNNWTYNNLI 296



 Score = 60.8 bits (146), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 40/148 (27%), Positives = 71/148 (47%), Gaps = 2/148 (1%)

Query: 353 QAGFKHDEHTYTTMV-GILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           Q G K     Y  ++ G+    R   A  K   +M   G   N  TYN ++    +    
Sbjct: 597 QKGIKPSTILYNIIIDGLFEAGRTVPAKVKF-HEMTESGIAMNKCTYNIVLRGLFKNRCF 655

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
           +EA+ +FK+++ +  + + +T  T+I    +   ++ A D++  +  +GL P   TYS++
Sbjct: 656 DEAIFLFKELRAMNVKINIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCVVTYSIM 715

Query: 472 INCLGKAGHLQAAHQLFCEMVNQGCIPN 499
           I  L K G ++ A  +F  M N GC P+
Sbjct: 716 ITNLIKEGLVEEAEDMFSSMQNAGCEPD 743


>gi|41152688|dbj|BAD08213.1| hypothetical protein [Oryza sativa Indica Group]
          Length = 762

 Score =  152 bits (384), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 98/350 (28%), Positives = 162/350 (46%), Gaps = 36/350 (10%)

Query: 359 DEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVF 418
           D  TY++++  L + +      ++L  MV++G  PN +TYN ++H Y  +    EA+   
Sbjct: 230 DVVTYSSIIAALCKGQAMDKAMEVLTTMVKNGVMPNCMTYNSILHGYCSSEQPKEAIGFL 289

Query: 419 KQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKA 478
           K+M+  G EPD VTY +L+D   K G    A  ++  M   GL PD  TY  ++      
Sbjct: 290 KKMRSDGVEPDVVTYNSLMDYLCKNGRSTEARKIFDSMTKRGLEPDIATYCTLLQGYATK 349

Query: 479 GHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTY 538
           G L   H L   MV  G  P+   +NI+I   AK      A+ ++  M+  G  P+ VTY
Sbjct: 350 GALVEMHALLDLMVRNGIHPDHHVFNILICAYAKQEKVDEAMLVFSKMRQHGLNPNVVTY 409

Query: 539 SIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLV------DLWGKA--------- 583
             V+ +L   G +D+A   F +M  +   P+  VY  L+      D W KA         
Sbjct: 410 GAVIGILCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHSLCIFDKWDKAEELILEMLD 469

Query: 584 --------------------GNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSD 623
                               G V ++ + ++ M++ G++PNV T ++L+  +   G++ +
Sbjct: 470 RGICLNTIFFNSIIHSHCKEGRVIESEKLFDLMVRIGVKPNVITYSTLIDGYCLAGKMDE 529

Query: 624 AYHLLQGMLNLGLKPSLQTY-TLLLSCCTEARSPYDMGFCHELMAVSGHP 672
           A  LL  M ++G+KP   TY TL+   C  +R    +    E+++    P
Sbjct: 530 ATKLLSSMFSVGMKPDCVTYNTLINGYCRVSRMDDALALFKEMVSSGVSP 579



 Score =  146 bits (369), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 103/416 (24%), Positives = 192/416 (46%), Gaps = 5/416 (1%)

Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLI 402
           A+GF   +R   G + D  TY +++  L +  +     K+ D M + G +P++ TY  L+
Sbjct: 285 AIGFLKKMRSD-GVEPDVVTYNSLMDYLCKNGRSTEARKIFDSMTKRGLEPDIATYCTLL 343

Query: 403 HSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLS 462
             Y     L E   +   M   G  PD   +  LI  +AK   +D AM ++ KM+  GL+
Sbjct: 344 QGYATKGALVEMHALLDLMVRNGIHPDHHVFNILICAYAKQEKVDEAMLVFSKMRQHGLN 403

Query: 463 PDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKL 522
           P+  TY  +I  L K+G +  A   F +M+++G  PN++ Y  +I        +  A +L
Sbjct: 404 PNVVTYGAVIGILCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHSLCIFDKWDKAEEL 463

Query: 523 YRDMQNAGFEPDKVTYSIVMEVLGHC--GYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLW 580
             +M + G   + + ++ ++    HC  G + E+E +F  M R    P+   Y  L+D +
Sbjct: 464 ILEMLDRGICLNTIFFNSIIH--SHCKEGRVIESEKLFDLMVRIGVKPNVITYSTLIDGY 521

Query: 581 GKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSL 640
             AG + +A +   +M   G++P+  T N+L++ + RV ++ DA  L + M++ G+ P++
Sbjct: 522 CLAGKMDEATKLLSSMFSVGMKPDCVTYNTLINGYCRVSRMDDALALFKEMVSSGVSPNI 581

Query: 641 QTYTLLLSCCTEARSPYDMGFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEM 700
            TY ++L      R        +  +  SG    +   ++   G    N+ D      + 
Sbjct: 582 ITYNIILQGLFHTRRTAAAKELYVGITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQN 641

Query: 701 MHSEDRESKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAVKEKGMSYWLI 756
           +   D + +    + ++  L K G  +EA  ++   +   + PD      M+  LI
Sbjct: 642 LCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLI 697



 Score =  128 bits (321), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 89/322 (27%), Positives = 152/322 (47%), Gaps = 4/322 (1%)

Query: 353 QAGFKHDEHTYTTMV-GILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           + GF+ +  T+T ++ G+    R   A++ +L +M    C P+V +   L+      N  
Sbjct: 115 KKGFRVEAITFTPLLKGLCADKRTSDAMDIVLRRMTELSCMPDVFSCTILLKGLCDENRS 174

Query: 412 NEALDVFKQM---QVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTY 468
            EAL++   M   +  G  PD V+Y T+I+   K G  D A   Y +M    +SPD  TY
Sbjct: 175 QEALELLHMMADDRGGGSAPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRRISPDVVTY 234

Query: 469 SVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQN 528
           S II  L K   +  A ++   MV  G +PN +TYN ++     +   + A+   + M++
Sbjct: 235 SSIIAALCKGQAMDKAMEVLTTMVKNGVMPNCMTYNSILHGYCSSEQPKEAIGFLKKMRS 294

Query: 529 AGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRK 588
            G EPD VTY+ +M+ L   G   EA  +F  M ++   PD   Y  L+  +   G + +
Sbjct: 295 DGVEPDVVTYNSLMDYLCKNGRSTEARKIFDSMTKRGLEPDIATYCTLLQGYATKGALVE 354

Query: 589 AWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
                + M++ G+ P+    N L+ A+ +  ++ +A  +   M   GL P++ TY  ++ 
Sbjct: 355 MHALLDLMVRNGIHPDHHVFNILICAYAKQEKVDEAMLVFSKMRQHGLNPNVVTYGAVIG 414

Query: 649 CCTEARSPYDMGFCHELMAVSG 670
              ++ S  D     E M   G
Sbjct: 415 ILCKSGSVDDAMLYFEQMIDEG 436



 Score =  125 bits (315), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 75/244 (30%), Positives = 131/244 (53%)

Query: 381 KLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIH 440
           KL D MVR G +PNV+TY+ LI  Y  A  ++EA  +   M  VG +PD VTY TLI+ +
Sbjct: 497 KLFDLMVRIGVKPNVITYSTLIDGYCLAGKMDEATKLLSSMFSVGMKPDCVTYNTLINGY 556

Query: 441 AKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNL 500
            +   +D A+ ++K+M ++G+SP+  TY++I+  L       AA +L+  +   G    L
Sbjct: 557 CRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVGITKSGTQLEL 616

Query: 501 VTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAE 560
            TYNI++    K      AL++++++     + +  T++I++  L   G  DEA+ +FA 
Sbjct: 617 STYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAA 676

Query: 561 MRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQ 620
           +     VPD   Y L+ +   + G + +  + + +M + G   N    NS++   L+ G 
Sbjct: 677 LSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIVRKLLQRGD 736

Query: 621 LSDA 624
           ++ A
Sbjct: 737 ITRA 740



 Score = 75.5 bits (184), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 71/305 (23%), Positives = 130/305 (42%), Gaps = 46/305 (15%)

Query: 449 AMDMYKKMQAAG---LSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYN- 504
           A+  Y +M  AG   ++P   TY ++I C  +AG L         +V +G     +T+  
Sbjct: 68  AVSRYNRMARAGAGKVTPTVHTYGILIGCCCRAGRLDLGFAALGNVVKKGFRVEAITFTP 127

Query: 505 IMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAV-----FA 559
           ++  L A  R   +   + R M      PD  + +I+++  G C      EA+      A
Sbjct: 128 LLKGLCADKRTSDAMDIVLRRMTELSCMPDVFSCTILLK--GLCDENRSQEALELLHMMA 185

Query: 560 EMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVG 619
           + R     PD   Y  +++ + K G+  KA+  Y  ML   + P+V T +S+++A  +  
Sbjct: 186 DDRGGGSAPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQ 245

Query: 620 QLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGFCHELMAVSGHPAHMFLLS 679
            +  A  +L  M+  G+ P+  TY  +L            G+C      S  P       
Sbjct: 246 AMDKAMEVLTTMVKNGVMPNCMTYNSILH-----------GYCS-----SEQP------- 282

Query: 680 MPSPGPDGQNVRDHVGSFLEMMHSEDRESKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQK 739
                      ++ +G FL+ M S+  E      ++++D+L K+G   EA  +++   ++
Sbjct: 283 -----------KEAIG-FLKKMRSDGVEPDVVTYNSLMDYLCKNGRSTEARKIFDSMTKR 330

Query: 740 NVYPD 744
            + PD
Sbjct: 331 GLEPD 335


>gi|414586855|tpg|DAA37426.1| TPA: hypothetical protein ZEAMMB73_447866 [Zea mays]
          Length = 484

 Score =  152 bits (384), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 86/302 (28%), Positives = 151/302 (50%), Gaps = 2/302 (0%)

Query: 346 FFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSY 405
           F   LRR  G +    T+ T++  + +A      N L   M + G  P+V TY   I   
Sbjct: 137 FDEMLRR--GVQPTVVTFNTLMSGMCKASDLNNANALRGLMAKAGIAPDVYTYGAFIQGL 194

Query: 406 GRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDT 465
            +   + +A+++F++M   G  P+ V   TLID H K G +   +++  +M   G+  D 
Sbjct: 195 CKTGRIQDAMEMFEEMCERGLNPNTVVLTTLIDAHCKEGDVTAGLELRWEMATRGVKADL 254

Query: 466 FTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRD 525
             Y+ ++N   +   ++AA+ +  EM   G  P+ VTY  +I    K     +A+++ ++
Sbjct: 255 VAYNALVNGFCRVRDMKAANDIVEEMRKDGLKPDKVTYTTLIDGCCKEGELDTAMEMKQE 314

Query: 526 MQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGN 585
           M + G   D VTY+ ++  L   G   +AE +  EM      PD   Y +++D + K G+
Sbjct: 315 MSDEGVALDDVTYTALISGLSKAGRSVDAERILCEMMEAGLQPDNTTYTMVIDAFCKNGD 374

Query: 586 VRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTL 645
           V+  ++  + M   G  P + T N +++ F  +GQ+ +A  LL  MLN+G+ P+  TY +
Sbjct: 375 VKTGFKHLKEMQNKGKNPGIVTYNVVMNGFCSLGQMKNADMLLNAMLNIGVCPNDITYNI 434

Query: 646 LL 647
           LL
Sbjct: 435 LL 436



 Score =  132 bits (332), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 77/242 (31%), Positives = 128/242 (52%), Gaps = 4/242 (1%)

Query: 385 QMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAG 444
           +M   G + ++V YN L++ + R   +  A D+ ++M+  G +PD+VTY TLID   K G
Sbjct: 244 EMATRGVKADLVAYNALVNGFCRVRDMKAANDIVEEMRKDGLKPDKVTYTTLIDGCCKEG 303

Query: 445 FLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYN 504
            LD AM+M ++M   G++ D  TY+ +I+ L KAG    A ++ CEM+  G  P+  TY 
Sbjct: 304 ELDTAMEMKQEMSDEGVALDDVTYTALISGLSKAGRSVDAERILCEMMEAGLQPDNTTYT 363

Query: 505 IMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRK 564
           ++I    K  + ++  K  ++MQN G  P  VTY++VM      G +  A+ +   M   
Sbjct: 364 MVIDAFCKNGDVKTGFKHLKEMQNKGKNPGIVTYNVVMNGFCSLGQMKNADMLLNAMLNI 423

Query: 565 NWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDA 624
              P++  Y +L+D   K G VR   E   A    G+  +     SL++ F++  + + +
Sbjct: 424 GVCPNDITYNILLDGHCKHGKVRDTEELKSA---KGMVSDFGVYTSLINEFVK-KKSAKS 479

Query: 625 YH 626
           YH
Sbjct: 480 YH 481



 Score =  109 bits (273), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 74/238 (31%), Positives = 119/238 (50%), Gaps = 7/238 (2%)

Query: 347 FNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYG 406
             W     G K D   Y  +V    R R   A N ++++M +DG +P+ VTY  LI    
Sbjct: 241 LRWEMATRGVKADLVAYNALVNGFCRVRDMKAANDIVEEMRKDGLKPDKVTYTTLIDGCC 300

Query: 407 RANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTF 466
           +   L+ A+++ ++M   G   D VTY  LI   +KAG    A  +  +M  AGL PD  
Sbjct: 301 KEGELDTAMEMKQEMSDEGVALDDVTYTALISGLSKAGRSVDAERILCEMMEAGLQPDNT 360

Query: 467 TYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDM 526
           TY+++I+   K G ++   +   EM N+G  P +VTYN+++         ++A  L   M
Sbjct: 361 TYTMVIDAFCKNGDVKTGFKHLKEMQNKGKNPGIVTYNVVMNGFCSLGQMKNADMLLNAM 420

Query: 527 QNAGFEPDKVTYSIVMEVLGHC--GYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGK 582
            N G  P+ +TY+I+++  GHC  G + + E + +    K  V D  VY  L++ + K
Sbjct: 421 LNIGVCPNDITYNILLD--GHCKHGKVRDTEELKSA---KGMVSDFGVYTSLINEFVK 473



 Score =  100 bits (250), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 62/214 (28%), Positives = 106/214 (49%), Gaps = 1/214 (0%)

Query: 453 YKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAK 512
           Y  +  AG+ P+   +++++  + ++G L +A  +F EM+ +G  P +VT+N +++   K
Sbjct: 102 YLHLLDAGVPPEARQFNMLMRDMIRSGKLASARNVFDEMLRRGVQPTVVTFNTLMSGMCK 161

Query: 513 ARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPV 572
           A +  +A  L   M  AG  PD  TY   ++ L   G + +A  +F EM  +   P+  V
Sbjct: 162 ASDLNNANALRGLMAKAGIAPDVYTYGAFIQGLCKTGRIQDAMEMFEEMCERGLNPNTVV 221

Query: 573 YGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGML 632
              L+D   K G+V    E    M   G++ ++   N+L++ F RV  +  A  +++ M 
Sbjct: 222 LTTLIDAHCKEGDVTAGLELRWEMATRGVKADLVAYNALVNGFCRVRDMKAANDIVEEMR 281

Query: 633 NLGLKPSLQTYTLLLS-CCTEARSPYDMGFCHEL 665
             GLKP   TYT L+  CC E      M    E+
Sbjct: 282 KDGLKPDKVTYTTLIDGCCKEGELDTAMEMKQEM 315



 Score = 47.4 bits (111), Expect = 0.031,   Method: Compositional matrix adjust.
 Identities = 38/133 (28%), Positives = 64/133 (48%), Gaps = 5/133 (3%)

Query: 539 SIVMEVLGHCGYL-DEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAML 597
           S V +V    G L D    +   +RR   VP  P +    DL  +  +V +A+ +Y  +L
Sbjct: 51  SAVAKVYADEGLLPDGCSLLLLALRRGIRVP-MPAWS---DLMNRLPSVPEAYAFYLHLL 106

Query: 598 QAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPY 657
            AG+ P     N L+   +R G+L+ A ++   ML  G++P++ T+  L+S   +A    
Sbjct: 107 DAGVPPEARQFNMLMRDMIRSGKLASARNVFDEMLRRGVQPTVVTFNTLMSGMCKASDLN 166

Query: 658 DMGFCHELMAVSG 670
           +      LMA +G
Sbjct: 167 NANALRGLMAKAG 179



 Score = 42.0 bits (97), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 30/129 (23%), Positives = 57/129 (44%), Gaps = 1/129 (0%)

Query: 553 EAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLL 612
           EA A +  +      P+   + +L+    ++G +  A   ++ ML+ G++P V T N+L+
Sbjct: 97  EAYAFYLHLLDAGVPPEARQFNMLMRDMIRSGKLASARNVFDEMLRRGVQPTVVTFNTLM 156

Query: 613 SAFLRVGQLSDAYHLLQGMLNLGLKPSLQTY-TLLLSCCTEARSPYDMGFCHELMAVSGH 671
           S   +   L++A  L   M   G+ P + TY   +   C   R    M    E+     +
Sbjct: 157 SGMCKASDLNNANALRGLMAKAGIAPDVYTYGAFIQGLCKTGRIQDAMEMFEEMCERGLN 216

Query: 672 PAHMFLLSM 680
           P  + L ++
Sbjct: 217 PNTVVLTTL 225


>gi|334182978|ref|NP_001185123.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
           thaliana]
 gi|332193283|gb|AEE31404.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
           thaliana]
          Length = 811

 Score =  152 bits (384), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 90/274 (32%), Positives = 145/274 (52%), Gaps = 2/274 (0%)

Query: 375 QFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYC 434
           Q    ++LL  ++  G  PNVVT+  LI+ + +   ++ A D+FK M+  G EPD + Y 
Sbjct: 266 QIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYS 325

Query: 435 TLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQ 494
           TLID + KAG L +   ++ +    G+  D   +S  I+   K+G L  A  ++  M+ Q
Sbjct: 326 TLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQ 385

Query: 495 GCIPNLVTYNIMI-ALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDE 553
           G  PN+VTY I+I  L    R Y+ A  +Y  +   G EP  VTYS +++    CG L  
Sbjct: 386 GISPNVVTYTILIKGLCQDGRIYE-AFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRS 444

Query: 554 AEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLS 613
             A++ +M +  + PD  +YG+LVD   K G +  A  +   ML   +R NV   NSL+ 
Sbjct: 445 GFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLID 504

Query: 614 AFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
            + R+ +  +A  + + M   G+KP + T+T ++
Sbjct: 505 GWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVM 538



 Score =  124 bits (311), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 79/307 (25%), Positives = 152/307 (49%), Gaps = 18/307 (5%)

Query: 353 QAGFKHDEHTYTTMV------GILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYG 406
           + G+  D   Y  +V      G++  A +F    K+L Q +R     NVV +N LI  + 
Sbjct: 454 KMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSV--KMLGQSIR----LNVVVFNSLIDGWC 507

Query: 407 RANYLNEALDVFKQMQVVGCEPDRVTYCTLI------DIHAKAGFLDVAMDMYKKMQAAG 460
           R N  +EAL VF+ M + G +PD  T+ T++      D   K     + + ++  MQ   
Sbjct: 508 RLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEDAFCKHMKPTIGLQLFDLMQRNK 567

Query: 461 LSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSAL 520
           +S D    +V+I+ L K   ++ A + F  ++     P++VTYN MI      R    A 
Sbjct: 568 ISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAE 627

Query: 521 KLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLW 580
           +++  ++   F P+ VT +I++ VL     +D A  +F+ M  K   P+   YG L+D +
Sbjct: 628 RIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWF 687

Query: 581 GKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSL 640
            K+ ++  +++ +E M + G+ P++ + + ++    + G++ +A ++    ++  L P +
Sbjct: 688 SKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDV 747

Query: 641 QTYTLLL 647
             Y +L+
Sbjct: 748 VAYAILI 754



 Score =  120 bits (301), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 100/418 (23%), Positives = 183/418 (43%), Gaps = 21/418 (5%)

Query: 344 LGFFNWLRRQA---GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNR 400
           LG  + L  QA   G K D   +++ + +  ++      + +  +M+  G  PNVVTY  
Sbjct: 337 LGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTI 396

Query: 401 LIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAG 460
           LI    +   + EA  ++ Q+   G EP  VTY +LID   K G L     +Y+ M   G
Sbjct: 397 LIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMG 456

Query: 461 LSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSAL 520
             PD   Y V+++ L K G +  A +   +M+ Q    N+V +N +I    +   +  AL
Sbjct: 457 YPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEAL 516

Query: 521 KLYRDMQNAGFEPDKVTYSIVMEVL----GHCGYLDEAEA--VFAEMRRKNWVPDEPVYG 574
           K++R M   G +PD  T++ VM V       C ++       +F  M+R     D  V  
Sbjct: 517 KVFRLMGIYGIKPDVATFTTVMRVSIMEDAFCKHMKPTIGLQLFDLMQRNKISADIAVCN 576

Query: 575 LLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNL 634
           +++ L  K   +  A +++  +++  + P++ T N+++  +  + +L +A  + + +   
Sbjct: 577 VVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVT 636

Query: 635 GLKPSLQTYTLLLSCCTEARSPYDMGFCHELMAVSGHPAHMF----LLSMPSPGPDGQNV 690
              P+  T T+L+    +            +MA  G   +      L+   S   D +  
Sbjct: 637 PFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIE-- 694

Query: 691 RDHVGSFLEMMHSEDRESKRGLV--DAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAV 746
               GSF      +++     +V    ++D L K G  +EA +++  A    + PD V
Sbjct: 695 ----GSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVV 748



 Score =  117 bits (293), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 73/256 (28%), Positives = 128/256 (50%), Gaps = 6/256 (2%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINK------LLDQMVRDGCQPNVVTYNRLIHSYGRA 408
           G K D  T+TT++ +      F    K      L D M R+    ++   N +IH   + 
Sbjct: 526 GIKPDVATFTTVMRVSIMEDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKC 585

Query: 409 NYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTY 468
           + + +A   F  +     EPD VTY T+I  +     LD A  +++ ++     P+T T 
Sbjct: 586 HRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTL 645

Query: 469 SVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQN 528
           +++I+ L K   +  A ++F  M  +G  PN VTY  ++   +K+ + + + KL+ +MQ 
Sbjct: 646 TILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQE 705

Query: 529 AGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRK 588
            G  P  V+YSI+++ L   G +DEA  +F +      +PD   Y +L+  + K G + +
Sbjct: 706 KGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVE 765

Query: 589 AWEWYEAMLQAGLRPN 604
           A   YE ML+ G++P+
Sbjct: 766 AALLYEHMLRNGVKPD 781



 Score =  100 bits (250), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 62/232 (26%), Positives = 114/232 (49%), Gaps = 5/232 (2%)

Query: 341 TVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNR 400
           T+ L  F+ ++R      D      ++ +L +  +    +K  + ++    +P++VTYN 
Sbjct: 554 TIGLQLFDLMQRNK-ISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNT 612

Query: 401 LIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAG 460
           +I  Y     L+EA  +F+ ++V    P+ VT   LI +  K   +D A+ M+  M   G
Sbjct: 613 MICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKG 672

Query: 461 LSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSAL 520
             P+  TY  +++   K+  ++ + +LF EM  +G  P++V+Y+I+I    K      A 
Sbjct: 673 SKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEAT 732

Query: 521 KLYRDMQNAGFEPDKVTYSIVMEVLGHC--GYLDEAEAVFAEMRRKNWVPDE 570
            ++    +A   PD V Y+I++   G+C  G L EA  ++  M R    PD+
Sbjct: 733 NIFHQAIDAKLLPDVVAYAILIR--GYCKVGRLVEAALLYEHMLRNGVKPDD 782



 Score = 89.7 bits (221), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 56/191 (29%), Positives = 96/191 (50%), Gaps = 1/191 (0%)

Query: 346 FFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSY 405
           FFN L  +   + D  TY TM+      R+     ++ + +      PN VT   LIH  
Sbjct: 594 FFNNLI-EGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVL 652

Query: 406 GRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDT 465
            + N ++ A+ +F  M   G +P+ VTY  L+D  +K+  ++ +  ++++MQ  G+SP  
Sbjct: 653 CKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSI 712

Query: 466 FTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRD 525
            +YS+II+ L K G +  A  +F + ++   +P++V Y I+I    K      A  LY  
Sbjct: 713 VSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEH 772

Query: 526 MQNAGFEPDKV 536
           M   G +PD +
Sbjct: 773 MLRNGVKPDDL 783



 Score = 42.7 bits (99), Expect = 0.88,   Method: Compositional matrix adjust.
 Identities = 51/250 (20%), Positives = 95/250 (38%), Gaps = 52/250 (20%)

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKM------------QAA 459
           N AL  F+  ++ G +P   ++ T+  +  + G  DVA  ++ +M               
Sbjct: 84  NSALKYFRWAEISGKDP---SFYTIAHVLIRNGMFDVADKVFDEMITNRGKDFNVLGSIR 140

Query: 460 GLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGC-IPNLVTYNIMIALQAKARNYQS 518
             S D      ++ C  + G +  A ++F      G  IP    Y ++ +L    R    
Sbjct: 141 DRSLDADVCKFLMECCCRYGMVDKALEIFVYSTQLGVVIPQDSVYRMLNSLIGSDRVDLI 200

Query: 519 ALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVD 578
           A   +  +   G EP  V+                                   +G ++D
Sbjct: 201 A-DHFDKLCRGGIEPSGVS----------------------------------AHGFVLD 225

Query: 579 LWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKP 638
                G V KA +++  +++ G R  + +CN +L   L V Q+  A  LL  +L+ G  P
Sbjct: 226 ALFCKGEVTKALDFHRLVMERGFRVGIVSCNKVLKG-LSVDQIEVASRLLSLVLDCGPAP 284

Query: 639 SLQTYTLLLS 648
           ++ T+  L++
Sbjct: 285 NVVTFCTLIN 294


>gi|224125420|ref|XP_002329801.1| predicted protein [Populus trichocarpa]
 gi|222870863|gb|EEF07994.1| predicted protein [Populus trichocarpa]
          Length = 478

 Score =  152 bits (384), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 94/310 (30%), Positives = 156/310 (50%), Gaps = 12/310 (3%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           GF+HD  T+  M+  L  A +F    ++L++M  + C+     +  +   YGR +   +A
Sbjct: 45  GFRHDHTTFGVMISKLVSANEFRPAEEMLNRMKEEKCRITEEIFLSICRGYGRVHMPLDA 104

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
           + VF +M   GC+P   +Y ++  I  +   L VAM  YK M+  G+     + +V+I  
Sbjct: 105 IRVFHKMNDFGCKPTDKSYISVFAILVEENQLKVAMSFYKYMREMGVRQSVVSLNVLIKA 164

Query: 475 LGK-AGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEP 533
           L K +G + AA ++F EM  +GC P+  TY  +I    K      A +L+++M   G  P
Sbjct: 165 LCKNSGTIDAAFEIFREMPKRGCDPDSYTYGTLINGLCKLGKTFEAKELFKEMDTKGCSP 224

Query: 534 DKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWY 593
             VTYS +M  L   G +DEA  +F +M++K   P+   Y  L+D   K G   +A E  
Sbjct: 225 SVVTYSCLMHGLCQAGNVDEAMGLFDKMKKKAIEPNVFTYSSLMDGLCKNGGSLEAMELL 284

Query: 594 EAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEA 653
           E M++   +PN+ T ++L++   + G+L++A   L  M   GLKP    Y  +++     
Sbjct: 285 EMMVRKRHKPNMVTYSTLINGLCKEGKLAEAVETLDRMKLQGLKPDAGLYGKIIN----- 339

Query: 654 RSPYDMGFCH 663
                 GFC+
Sbjct: 340 ------GFCN 343



 Score =  117 bits (294), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 84/316 (26%), Positives = 144/316 (45%), Gaps = 13/316 (4%)

Query: 333 VLKQLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAIN---KLLDQMVRD 389
           +L +     VA+ F+ ++R + G +    +   ++  L   +  G I+   ++  +M + 
Sbjct: 129 ILVEENQLKVAMSFYKYMR-EMGVRQSVVSLNVLIKAL--CKNSGTIDAAFEIFREMPKR 185

Query: 390 GCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVA 449
           GC P+  TY  LI+   +     EA ++FK+M   GC P  VTY  L+    +AG +D A
Sbjct: 186 GCDPDSYTYGTLINGLCKLGKTFEAKELFKEMDTKGCSPSVVTYSCLMHGLCQAGNVDEA 245

Query: 450 MDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIAL 509
           M ++ KM+   + P+ FTYS +++ L K G    A +L   MV +   PN+VTY+ +I  
Sbjct: 246 MGLFDKMKKKAIEPNVFTYSSLMDGLCKNGGSLEAMELLEMMVRKRHKPNMVTYSTLING 305

Query: 510 QAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPD 569
             K      A++    M+  G +PD   Y  ++    +     EA     EM      P+
Sbjct: 306 LCKEGKLAEAVETLDRMKLQGLKPDAGLYGKIINGFCNIRKFQEAATYLDEMVLGQISPN 365

Query: 570 EPVYGLLVDL-------WGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLS 622
              + L V L           GN+ ++++ Y  M   G+  +  T +SL+  F + G L 
Sbjct: 366 RVTWSLHVKLNNMVVQGLCTNGNLNRSFQLYIGMRTRGISIDAGTFDSLVKCFCKKGDLH 425

Query: 623 DAYHLLQGMLNLGLKP 638
            A  +   M+  G  P
Sbjct: 426 KAARIFDEMVLDGCVP 441



 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 51/209 (24%), Positives = 104/209 (49%), Gaps = 12/209 (5%)

Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAIN--KLLDQMVRDGCQPNVVTYNR 400
           A+G F+ ++++A  + +  TY++++   G  +  G++   +LL+ MVR   +PN+VTY+ 
Sbjct: 245 AMGLFDKMKKKA-IEPNVFTYSSLMD--GLCKNGGSLEAMELLEMMVRKRHKPNMVTYST 301

Query: 401 LIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAG 460
           LI+   +   L EA++   +M++ G +PD   Y  +I+          A     +M    
Sbjct: 302 LINGLCKEGKLAEAVETLDRMKLQGLKPDAGLYGKIINGFCNIRKFQEAATYLDEMVLGQ 361

Query: 461 LSPDTFTYSV-------IINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKA 513
           +SP+  T+S+       ++  L   G+L  + QL+  M  +G   +  T++ ++    K 
Sbjct: 362 ISPNRVTWSLHVKLNNMVVQGLCTNGNLNRSFQLYIGMRTRGISIDAGTFDSLVKCFCKK 421

Query: 514 RNYQSALKLYRDMQNAGFEPDKVTYSIVM 542
            +   A +++ +M   G  PD   +S V+
Sbjct: 422 GDLHKAARIFDEMVLDGCVPDHGIWSAVV 450


>gi|326510087|dbj|BAJ87260.1| predicted protein [Hordeum vulgare subsp. vulgare]
 gi|326520816|dbj|BAJ92771.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 1092

 Score =  152 bits (383), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 95/357 (26%), Positives = 177/357 (49%), Gaps = 2/357 (0%)

Query: 316  EALGNTNYSMDAYQANQVLKQLQDHTVALGFFNWLRR--QAGFKHDEHTYTTMVGILGRA 373
            E + ++   +D    + +++ L  H  AL     +++    G      +Y  ++  L   
Sbjct: 720  ENIASSGLLLDDLFLSPIIRHLCKHKEALAAHELVKKFENLGVSLKTGSYNALICGLVDE 779

Query: 374  RQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTY 433
                   +L  +M R GC P+  TY+ ++ + G++  + + L + ++M   G +   VTY
Sbjct: 780  DLIDIAEELFSEMKRLGCDPDEFTYHLILDAMGKSMRIEDMLKIQEEMHNKGYKSTYVTY 839

Query: 434  CTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVN 493
             T+I    K+  LD A+++Y ++ + G SP   TY  +++ L K G+++ A  LF EM+ 
Sbjct: 840  NTIISGLVKSKMLDEAINLYYQLMSEGFSPTPCTYGPLLDGLLKDGNIEDAEALFDEMLE 899

Query: 494  QGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDE 553
             GC PN   YNI++     A + +   +L+  M   G  PD  +Y++V++ L   G L++
Sbjct: 900  CGCEPNCAIYNILLNGYRIAGDTEKVCELFESMVEQGMNPDIKSYTVVIDTLCADGRLND 959

Query: 554  AEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLS 613
              + F ++      PD   Y LL+   GK+G + +A   Y  M + G+ PN+ T NSL+ 
Sbjct: 960  GLSYFKQLTDMGLEPDLITYNLLIHGLGKSGRLEEALSLYNDMEKKGIAPNLYTYNSLIL 1019

Query: 614  AFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGFCHELMAVSG 670
               + G+ ++A  + + +L  G KP++ TY  L+   + + SP +    +  M V G
Sbjct: 1020 YLGKAGKAAEAGKMYEELLAKGWKPNVFTYNALIRGYSVSGSPENAFAAYGRMIVGG 1076



 Score =  151 bits (381), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 102/371 (27%), Positives = 185/371 (49%), Gaps = 12/371 (3%)

Query: 287  FSRHFASTGNVVESV--SRILRQW---KWGPLAEEALG---NTNYSMDAYQANQVLKQLQ 338
            F+ + AS+G +++ +  S I+R     K    A E +    N   S+     N ++  L 
Sbjct: 718  FAENIASSGLLLDDLFLSPIIRHLCKHKEALAAHELVKKFENLGVSLKTGSYNALICGLV 777

Query: 339  DHT---VALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNV 395
            D     +A   F+ ++R  G   DE TY  ++  +G++ +   + K+ ++M   G +   
Sbjct: 778  DEDLIDIAEELFSEMKR-LGCDPDEFTYHLILDAMGKSMRIEDMLKIQEEMHNKGYKSTY 836

Query: 396  VTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKK 455
            VTYN +I    ++  L+EA++++ Q+   G  P   TY  L+D   K G ++ A  ++ +
Sbjct: 837  VTYNTIISGLVKSKMLDEAINLYYQLMSEGFSPTPCTYGPLLDGLLKDGNIEDAEALFDE 896

Query: 456  MQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARN 515
            M   G  P+   Y++++N    AG  +   +LF  MV QG  P++ +Y ++I        
Sbjct: 897  MLECGCEPNCAIYNILLNGYRIAGDTEKVCELFESMVEQGMNPDIKSYTVVIDTLCADGR 956

Query: 516  YQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGL 575
                L  ++ + + G EPD +TY++++  LG  G L+EA +++ +M +K   P+   Y  
Sbjct: 957  LNDGLSYFKQLTDMGLEPDLITYNLLIHGLGKSGRLEEALSLYNDMEKKGIAPNLYTYNS 1016

Query: 576  LVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLG 635
            L+   GKAG   +A + YE +L  G +PNV T N+L+  +   G   +A+     M+  G
Sbjct: 1017 LILYLGKAGKAAEAGKMYEELLAKGWKPNVFTYNALIRGYSVSGSPENAFAAYGRMIVGG 1076

Query: 636  LKPSLQTYTLL 646
             +P+  TY  L
Sbjct: 1077 CRPNSSTYMQL 1087



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 86/318 (27%), Positives = 162/318 (50%), Gaps = 1/318 (0%)

Query: 349 WLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRA 408
           W  + +  K D  TY T++   G +    +++++ + +  DG   NVV+Y   + +  + 
Sbjct: 300 WKMKASDQKPDRVTYITLLDKCGDSGDSRSVSEIWNALKADGYNDNVVSYTAAVDALCQV 359

Query: 409 NYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTY 468
             ++EALDVF +M+  G  P + +Y +LI    KA   + A++++  M   G +P+ +T+
Sbjct: 360 GRVDEALDVFDEMKQKGIIPQQYSYNSLISGFLKADRFNRALELFNHMNIHGPTPNGYTH 419

Query: 469 SVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQN 528
            + IN  GK+G    A + +  M ++G +P++V  N ++   AK      A +++ +++ 
Sbjct: 420 VLFINYHGKSGESLKALKRYELMKSKGIVPDVVAGNAVLYGLAKTGRLGMAKRVFHELKA 479

Query: 529 AGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRK 588
            G  PD +TY+++++        DEA  +FAEM      PD      L+D+  KAG   +
Sbjct: 480 MGISPDNITYTMMIKCCSKASNADEAMKIFAEMIENRCAPDVLAMNSLIDMLYKAGRGNE 539

Query: 589 AWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
           AW+ +  + +  L P   T N+LL+   R G++ +   LL+GM +    P++ TY  +L 
Sbjct: 540 AWKIFYELKEMNLEPTDCTYNTLLAGLGREGKVKEVMQLLEGMNSNSFPPNIITYNTVLD 599

Query: 649 C-CTEARSPYDMGFCHEL 665
           C C      Y +   + +
Sbjct: 600 CLCKNGEVNYALDMLYSM 617



 Score =  139 bits (351), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 107/418 (25%), Positives = 191/418 (45%), Gaps = 14/418 (3%)

Query: 238 QPRSKAHSNRLNSNFKSNLQPSDAKVVECVSERFSKPSREMKIPAGLAPFSRHFASTGNV 297
           QPR   H+   + N+   L  +  +V + V++ F    R++ I A +  F   F + G  
Sbjct: 94  QPRV-VHTTE-SCNYMLELMRAHGRVGD-VAQVFDLMQRQI-IKANVGTFCTVFGAVG-- 147

Query: 298 VESVSRILRQWKWGPLAEEALGNTNYSMDAYQANQVLKQLQDHTVALGFFNWLRRQA--G 355
              V   LR     P+A   +      ++AY  N ++  L          +  +  A  G
Sbjct: 148 ---VEGGLRS---APVALPVMKEAGIVLNAYTYNGLIYFLVKSGFDREAMDVYKAMAADG 201

Query: 356 FKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEAL 415
                 TY+ ++   G+ R    +  LL +M   G +PNV +Y   I   G+A  L EA 
Sbjct: 202 VVPTVRTYSVLMLAFGKRRDAETVVGLLGEMEARGVRPNVYSYTICIRVLGQAGRLEEAY 261

Query: 416 DVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCL 475
            + ++M+  GC+PD VT   LI I   AG L  A D++ KM+A+   PD  TY  +++  
Sbjct: 262 RILRKMEEEGCKPDVVTNTVLIQILCDAGRLADAKDVFWKMKASDQKPDRVTYITLLDKC 321

Query: 476 GKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDK 535
           G +G  ++  +++  +   G   N+V+Y   +    +      AL ++ +M+  G  P +
Sbjct: 322 GDSGDSRSVSEIWNALKADGYNDNVVSYTAAVDALCQVGRVDEALDVFDEMKQKGIIPQQ 381

Query: 536 VTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEA 595
            +Y+ ++         + A  +F  M      P+   + L ++  GK+G   KA + YE 
Sbjct: 382 YSYNSLISGFLKADRFNRALELFNHMNIHGPTPNGYTHVLFINYHGKSGESLKALKRYEL 441

Query: 596 MLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEA 653
           M   G+ P+V   N++L    + G+L  A  +   +  +G+ P   TYT+++ CC++A
Sbjct: 442 MKSKGIVPDVVAGNAVLYGLAKTGRLGMAKRVFHELKAMGISPDNITYTMMIKCCSKA 499



 Score =  139 bits (349), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 81/293 (27%), Positives = 146/293 (49%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           G+  +  +YT  V  L +  +      + D+M + G  P   +YN LI  + +A+  N A
Sbjct: 341 GYNDNVVSYTAAVDALCQVGRVDEALDVFDEMKQKGIIPQQYSYNSLISGFLKADRFNRA 400

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
           L++F  M + G  P+  T+   I+ H K+G    A+  Y+ M++ G+ PD    + ++  
Sbjct: 401 LELFNHMNIHGPTPNGYTHVLFINYHGKSGESLKALKRYELMKSKGIVPDVVAGNAVLYG 460

Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPD 534
           L K G L  A ++F E+   G  P+ +TY +MI   +KA N   A+K++ +M      PD
Sbjct: 461 LAKTGRLGMAKRVFHELKAMGISPDNITYTMMIKCCSKASNADEAMKIFAEMIENRCAPD 520

Query: 535 KVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYE 594
            +  + ++++L   G  +EA  +F E++  N  P +  Y  L+   G+ G V++  +  E
Sbjct: 521 VLAMNSLIDMLYKAGRGNEAWKIFYELKEMNLEPTDCTYNTLLAGLGREGKVKEVMQLLE 580

Query: 595 AMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
            M      PN+ T N++L    + G+++ A  +L  M   G  P L +Y  ++
Sbjct: 581 GMNSNSFPPNIITYNTVLDCLCKNGEVNYALDMLYSMTMNGCMPDLSSYNTVM 633



 Score =  139 bits (349), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 101/376 (26%), Positives = 174/376 (46%), Gaps = 52/376 (13%)

Query: 324 SMDAYQA---NQVLKQLQDHTVALGFFNWLRRQA-------------GFKHDEHTYTTMV 367
           +MD Y+A   + V+  ++ ++V +  F   RR A             G + + ++YT  +
Sbjct: 190 AMDVYKAMAADGVVPTVRTYSVLMLAFGK-RRDAETVVGLLGEMEARGVRPNVYSYTICI 248

Query: 368 GILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCE 427
            +LG+A +     ++L +M  +GC+P+VVT   LI     A  L +A DVF +M+    +
Sbjct: 249 RVLGQAGRLEEAYRILRKMEEEGCKPDVVTNTVLIQILCDAGRLADAKDVFWKMKASDQK 308

Query: 428 PDRVTYCTL-----------------------------------IDIHAKAGFLDVAMDM 452
           PDRVTY TL                                   +D   + G +D A+D+
Sbjct: 309 PDRVTYITLLDKCGDSGDSRSVSEIWNALKADGYNDNVVSYTAAVDALCQVGRVDEALDV 368

Query: 453 YKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAK 512
           + +M+  G+ P  ++Y+ +I+   KA     A +LF  M   G  PN  T+ + I    K
Sbjct: 369 FDEMKQKGIIPQQYSYNSLISGFLKADRFNRALELFNHMNIHGPTPNGYTHVLFINYHGK 428

Query: 513 ARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPV 572
           +     ALK Y  M++ G  PD V  + V+  L   G L  A+ VF E++     PD   
Sbjct: 429 SGESLKALKRYELMKSKGIVPDVVAGNAVLYGLAKTGRLGMAKRVFHELKAMGISPDNIT 488

Query: 573 YGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGML 632
           Y +++    KA N  +A + +  M++    P+V   NSL+    + G+ ++A+ +   + 
Sbjct: 489 YTMMIKCCSKASNADEAMKIFAEMIENRCAPDVLAMNSLIDMLYKAGRGNEAWKIFYELK 548

Query: 633 NLGLKPSLQTYTLLLS 648
            + L+P+  TY  LL+
Sbjct: 549 EMNLEPTDCTYNTLLA 564



 Score =  132 bits (332), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 90/310 (29%), Positives = 148/310 (47%)

Query: 339 DHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTY 398
           D   AL  F  + RQ    H   +   M+ ++    + G + ++ D M R   + NV T+
Sbjct: 80  DPEEALELFLSVARQPRVVHTTESCNYMLELMRAHGRVGDVAQVFDLMQRQIIKANVGTF 139

Query: 399 NRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQA 458
             +  + G    L  A      M+  G   +  TY  LI    K+GF   AMD+YK M A
Sbjct: 140 CTVFGAVGVEGGLRSAPVALPVMKEAGIVLNAYTYNGLIYFLVKSGFDREAMDVYKAMAA 199

Query: 459 AGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQS 518
            G+ P   TYSV++   GK    +    L  EM  +G  PN+ +Y I I +  +A   + 
Sbjct: 200 DGVVPTVRTYSVLMLAFGKRRDAETVVGLLGEMEARGVRPNVYSYTICIRVLGQAGRLEE 259

Query: 519 ALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVD 578
           A ++ R M+  G +PD VT ++++++L   G L +A+ VF +M+  +  PD   Y  L+D
Sbjct: 260 AYRILRKMEEEGCKPDVVTNTVLIQILCDAGRLADAKDVFWKMKASDQKPDRVTYITLLD 319

Query: 579 LWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKP 638
             G +G+ R   E + A+   G   NV +  + + A  +VG++ +A  +   M   G+ P
Sbjct: 320 KCGDSGDSRSVSEIWNALKADGYNDNVVSYTAAVDALCQVGRVDEALDVFDEMKQKGIIP 379

Query: 639 SLQTYTLLLS 648
              +Y  L+S
Sbjct: 380 QQYSYNSLIS 389



 Score =  125 bits (314), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 103/410 (25%), Positives = 185/410 (45%), Gaps = 24/410 (5%)

Query: 300 SVSRILRQWKWGPLAEEALGNTNYSMDAYQANQVLKQLQDHTVALGFFNWLRRQAGFKHD 359
           SVS I     W  L  +   +   S  A  A   L Q+     AL  F+ ++ Q G    
Sbjct: 329 SVSEI-----WNALKADGYNDNVVSYTA--AVDALCQVGRVDEALDVFDEMK-QKGIIPQ 380

Query: 360 EHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFK 419
           +++Y +++    +A +F    +L + M   G  PN  T+   I+ +G++    +AL  ++
Sbjct: 381 QYSYNSLISGFLKADRFNRALELFNHMNIHGPTPNGYTHVLFINYHGKSGESLKALKRYE 440

Query: 420 QMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAG 479
            M+  G  PD V    ++   AK G L +A  ++ +++A G+SPD  TY+++I C  KA 
Sbjct: 441 LMKSKGIVPDVVAGNAVLYGLAKTGRLGMAKRVFHELKAMGISPDNITYTMMIKCCSKAS 500

Query: 480 HLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYS 539
           +   A ++F EM+   C P+++  N +I +  KA     A K++ +++    EP   TY+
Sbjct: 501 NADEAMKIFAEMIENRCAPDVLAMNSLIDMLYKAGRGNEAWKIFYELKEMNLEPTDCTYN 560

Query: 540 IVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQA 599
            ++  LG  G + E   +   M   ++ P+   Y  ++D   K G V  A +   +M   
Sbjct: 561 TLLAGLGREGKVKEVMQLLEGMNSNSFPPNIITYNTVLDCLCKNGEVNYALDMLYSMTMN 620

Query: 600 GLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDM 659
           G  P++ + N+++   ++  +L +A+ +   M  + L P   T       CT   S    
Sbjct: 621 GCMPDLSSYNTVMYGLVKEDRLDEAFWMFCQMKKV-LAPDYAT------VCTILPSFVRS 673

Query: 660 GFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRESK 709
           G   E +    H    ++L      PD +  R  V S +E +   D   K
Sbjct: 674 GLMKEAL----HTVREYILQ-----PDSKVDRSSVHSLMEGILKRDGTEK 714



 Score =  119 bits (298), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 82/337 (24%), Positives = 159/337 (47%), Gaps = 47/337 (13%)

Query: 414  ALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIIN 473
            A ++ K+ + +G      +Y  LI        +D+A +++ +M+  G  PD FTY +I++
Sbjct: 750  AHELVKKFENLGVSLKTGSYNALICGLVDEDLIDIAEELFSEMKRLGCDPDEFTYHLILD 809

Query: 474  CLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEP 533
             +GK+  ++   ++  EM N+G     VTYN +I+   K++    A+ LY  + + GF P
Sbjct: 810  AMGKSMRIEDMLKIQEEMHNKGYKSTYVTYNTIISGLVKSKMLDEAINLYYQLMSEGFSP 869

Query: 534  DKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWY 593
               TY  +++ L   G +++AEA+F EM      P+  +Y +L++ +  AG+  K  E +
Sbjct: 870  TPCTYGPLLDGLLKDGNIEDAEALFDEMLECGCEPNCAIYNILLNGYRIAGDTEKVCELF 929

Query: 594  EAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEA 653
            E+M++ G+ P++ +   ++      G+L+D     + + ++GL+P L TY LL+      
Sbjct: 930  ESMVEQGMNPDIKSYTVVIDTLCADGRLNDGLSYFKQLTDMGLEPDLITYNLLI------ 983

Query: 654  RSPYDMGFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRESKRGLV 713
                     H L                     G++     G   E +   +   K+G+ 
Sbjct: 984  ---------HGL---------------------GKS-----GRLEEALSLYNDMEKKGIA 1008

Query: 714  ------DAVVDFLHKSGLKEEAGSVWEVAAQKNVYPD 744
                  ++++ +L K+G   EAG ++E    K   P+
Sbjct: 1009 PNLYTYNSLILYLGKAGKAAEAGKMYEELLAKGWKPN 1045



 Score = 80.1 bits (196), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 64/245 (26%), Positives = 108/245 (44%), Gaps = 7/245 (2%)

Query: 413 EALDVF----KQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTY 468
           EAL++F    +Q +VV           L+  H + G  DVA  ++  MQ   +  +  T+
Sbjct: 83  EALELFLSVARQPRVVHTTESCNYMLELMRAHGRVG--DVA-QVFDLMQRQIIKANVGTF 139

Query: 469 SVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQN 528
             +   +G  G L++A      M   G + N  TYN +I    K+   + A+ +Y+ M  
Sbjct: 140 CTVFGAVGVEGGLRSAPVALPVMKEAGIVLNAYTYNGLIYFLVKSGFDREAMDVYKAMAA 199

Query: 529 AGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRK 588
            G  P   TYS++M   G     +    +  EM  +   P+   Y + + + G+AG + +
Sbjct: 200 DGVVPTVRTYSVLMLAFGKRRDAETVVGLLGEMEARGVRPNVYSYTICIRVLGQAGRLEE 259

Query: 589 AWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
           A+     M + G +P+V T   L+      G+L+DA  +   M     KP   TY  LL 
Sbjct: 260 AYRILRKMEEEGCKPDVVTNTVLIQILCDAGRLADAKDVFWKMKASDQKPDRVTYITLLD 319

Query: 649 CCTEA 653
            C ++
Sbjct: 320 KCGDS 324


>gi|225451899|ref|XP_002279045.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g38730-like [Vitis vinifera]
          Length = 590

 Score =  152 bits (383), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 91/296 (30%), Positives = 153/296 (51%), Gaps = 2/296 (0%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           R  GFK   H  T ++  L +AR    + K+  +MVR G  PN+  +N LIH+  ++  +
Sbjct: 154 RVHGFKPHLHACTVLLNSLAKARLTNMVWKVYKKMVRVGVVPNIHIFNVLIHACCKSGDV 213

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
            +A  +  +M+     PD  TY TLI ++ K G    A+ +  +M+  G+SPD  TY+ +
Sbjct: 214 EKAEQLLNEMESRFIFPDLFTYNTLISLYCKKGMHYEALGIQDRMERGGVSPDIVTYNSL 273

Query: 472 INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF 531
           I    + G ++ A +LF E+   G  PN VTY  +I    +  + + AL+L   M+  G 
Sbjct: 274 IYGFCREGRMREALRLFREI--NGATPNHVTYTTLIDGYCRVNDLEEALRLREVMEVEGL 331

Query: 532 EPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWE 591
            P  VTY+ ++  L   G + +A  +  EM  +   PD      L++ + K G++  A +
Sbjct: 332 HPGVVTYNSILRKLCEEGKIKDANRLLNEMSERKVEPDNVTCNTLINAYCKIGDMGSAMK 391

Query: 592 WYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
             + ML+AGL+P+  T  +L+  F ++ ++  A   L  ML+ G  PS  TY+ L+
Sbjct: 392 VKKKMLEAGLKPDQFTFKALIHGFCKLHEVDSAKEFLFEMLDAGFSPSYSTYSWLV 447



 Score =  135 bits (339), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 136/525 (25%), Positives = 222/525 (42%), Gaps = 95/525 (18%)

Query: 301 VSRILRQWKWGPLAEEALGNTNYSMDAYQANQVLKQL--QDHTVALGFFNWLRRQAGFKH 358
           V  I+ +  W  L +  +G+   ++ +   NQVL  L      V+  FF W+      KH
Sbjct: 17  VCGIVVKGHWNSLLKPNVGS---NLTSTILNQVLLNLSLDGCCVSWAFFKWVESNLNHKH 73

Query: 359 DEHTYTTMVGILGRARQFGAINKLLDQM-VRDGCQ-PNVVTYNRLIHS------------ 404
              +  TM+  L + +QF     LL+++ VRD    P+V+     IH             
Sbjct: 74  SLQSSWTMIHTLAKHKQFKTAQNLLERIAVRDYLSSPSVLNAVVRIHDDPDSNSQILSWL 133

Query: 405 ---YGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGL 461
              Y  +    +A+ VF+ M+V G +P       L++  AKA   ++   +YKKM   G+
Sbjct: 134 VIFYANSRMTQDAIQVFEHMRVHGFKPHLHACTVLLNSLAKARLTNMVWKVYKKMVRVGV 193

Query: 462 SPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALK 521
            P+   ++V+I+   K+G ++ A QL  EM ++   P+L TYN +I+L  K   +  AL 
Sbjct: 194 VPNIHIFNVLIHACCKSGDVEKAEQLLNEMESRFIFPDLFTYNTLISLYCKKGMHYEALG 253

Query: 522 LYRDMQNAGFEPDKVTYSIVMEVLGHC--GYLDEAEAVFAEMRRKNWVPDEPVYGLLVDL 579
           +   M+  G  PD VTY+ +  + G C  G + EA  +F E+      P+   Y  L+D 
Sbjct: 254 IQDRMERGGVSPDIVTYNSL--IYGFCREGRMREALRLFREI--NGATPNHVTYTTLIDG 309

Query: 580 WGKAGNVRKAWEWYEAMLQAGLRPNV---------------------------------- 605
           + +  ++ +A    E M   GL P V                                  
Sbjct: 310 YCRVNDLEEALRLREVMEVEGLHPGVVTYNSILRKLCEEGKIKDANRLLNEMSERKVEPD 369

Query: 606 -PTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGFC-- 662
             TCN+L++A+ ++G +  A  + + ML  GLKP   T+  L+            GFC  
Sbjct: 370 NVTCNTLINAYCKIGDMGSAMKVKKKMLEAGLKPDQFTFKALIH-----------GFCKL 418

Query: 663 HELMAVSGHPAHMFLLSMPSPG--PDGQNVRDHVGSFLEMMHSE------DRESKRGL-V 713
           HE+       A  FL  M   G  P        V S+ +  + E      D  S++GL V
Sbjct: 419 HEV-----DSAKEFLFEMLDAGFSPSYSTYSWLVDSYYDQDNKEAVIRLPDELSRKGLFV 473

Query: 714 D-----AVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAVKEKGMSY 753
           D     A++  L K    E A  ++ +   K +  D+V    ++Y
Sbjct: 474 DISVYRALIRRLCKIDKIESAERIFTLMQGKGMKGDSVVYTSLAY 518



 Score =  102 bits (254), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 67/235 (28%), Positives = 109/235 (46%)

Query: 362 TYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQM 421
           TYTT++    R        +L + M  +G  P VVTYN ++        + +A  +  +M
Sbjct: 302 TYTTLIDGYCRVNDLEEALRLREVMEVEGLHPGVVTYNSILRKLCEEGKIKDANRLLNEM 361

Query: 422 QVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHL 481
                EPD VT  TLI+ + K G +  AM + KKM  AGL PD FT+  +I+   K   +
Sbjct: 362 SERKVEPDNVTCNTLINAYCKIGDMGSAMKVKKKMLEAGLKPDQFTFKALIHGFCKLHEV 421

Query: 482 QAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIV 541
            +A +   EM++ G  P+  TY+ ++       N ++ ++L  ++   G   D   Y  +
Sbjct: 422 DSAKEFLFEMLDAGFSPSYSTYSWLVDSYYDQDNKEAVIRLPDELSRKGLFVDISVYRAL 481

Query: 542 MEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAM 596
           +  L     ++ AE +F  M+ K    D  VY  L   + KAG    A +  + M
Sbjct: 482 IRRLCKIDKIESAERIFTLMQGKGMKGDSVVYTSLAYAYFKAGKAIAASDMLDEM 536



 Score = 78.6 bits (192), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 55/212 (25%), Positives = 99/212 (46%)

Query: 362 TYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQM 421
           TY +++  L    +    N+LL++M     +P+ VT N LI++Y +   +  A+ V K+M
Sbjct: 337 TYNSILRKLCEEGKIKDANRLLNEMSERKVEPDNVTCNTLINAYCKIGDMGSAMKVKKKM 396

Query: 422 QVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHL 481
              G +PD+ T+  LI    K   +D A +   +M  AG SP   TYS +++      + 
Sbjct: 397 LEAGLKPDQFTFKALIHGFCKLHEVDSAKEFLFEMLDAGFSPSYSTYSWLVDSYYDQDNK 456

Query: 482 QAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIV 541
           +A  +L  E+  +G   ++  Y  +I    K    +SA +++  MQ  G + D V Y+ +
Sbjct: 457 EAVIRLPDELSRKGLFVDISVYRALIRRLCKIDKIESAERIFTLMQGKGMKGDSVVYTSL 516

Query: 542 MEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVY 573
                  G    A  +  EM ++  +    +Y
Sbjct: 517 AYAYFKAGKAIAASDMLDEMDKRRLMITLKIY 548


>gi|297600539|ref|NP_001049380.2| Os03g0215900 [Oryza sativa Japonica Group]
 gi|108706847|gb|ABF94642.1| RSP67.2, putative, expressed [Oryza sativa Japonica Group]
 gi|255674311|dbj|BAF11294.2| Os03g0215900 [Oryza sativa Japonica Group]
          Length = 676

 Score =  152 bits (383), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 121/505 (23%), Positives = 233/505 (46%), Gaps = 32/505 (6%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           G + D  T++T++         G   +  ++M   GC P+++TY+ +I +YGRA     A
Sbjct: 179 GVQPDNATFSTVISCARACGMPGKAVEWFEKMPDFGCSPDMLTYSAVIDAYGRAGDAETA 238

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
           L ++ + +    + D V   T+I +H+ +G  D A++++++M+AAG+ P+   Y+ +++ 
Sbjct: 239 LRLYDRARAEKWQLDPVICATVIRVHSSSGNFDGALNVFEEMKAAGVKPNLVVYNTVLDA 298

Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPD 534
           +G+A        +  E+V+Q  +PN  TY  ++    +AR  + A+ +YR M++   + D
Sbjct: 299 MGRAMRPWVVKTIHRELVSQEAVPNKATYCCLLHAYTRARYGEDAMAVYRVMKDEVMDID 358

Query: 535 KVTYSIVMEVLGHCGYLDEAEAVFAEMRR---KNWVPDEPVYGLLVDLWGKAGNVRKAWE 591
            V Y++++ +    GY++EAE +F +M+        PD   Y  +V L+   GNV  A  
Sbjct: 359 VVLYNMLLSMCADIGYVEEAEEIFRDMKASMDSRSKPDSWSYSSMVTLYSCTGNVAGAEG 418

Query: 592 WYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCT 651
               M++AG +PN+    SL+  + + G+  D       + +LG+ P  +    LL+   
Sbjct: 419 ILNEMVEAGFKPNIFILTSLIRCYGKAGRTDDVVRSFAMLEDLGITPDDRFCGCLLT--V 476

Query: 652 EARSPYD-----MGFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDR 706
            A +P D     +G      A  G    + L+   +P    + +R+  G  L        
Sbjct: 477 AAGTPADELGKVIGCIDRSSAQLGAVVRL-LVDAAAP---SEPLREAAGELL-------- 524

Query: 707 ESKRGLV-----DAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAVKEKGMSYWLINLHVM 761
              RG+V     + ++D        E+A ++ +VA +  +Y + V+ +  + W ++L  +
Sbjct: 525 GGARGVVRMPYCNCLMDLAVNLSQMEKACALLDVALRLGIYSN-VQTRTQTQWSLHLRGL 583

Query: 762 SDGTAVIALSRTLAWFRKQMLISGVGPSRIDIVTGWGRRS-RVTGTSLVRQAVQELLHMF 820
           S G A+  L   ++     +      P  + I TG G+ +    G + V    +  L   
Sbjct: 584 SVGAALTTLHVWMSDLYAALQAGDELPPLLGIHTGQGKNTYSYKGLATV---FESHLKEL 640

Query: 821 SFPFFTENGNSGCFVGCGEPLNKWL 845
             PF      +G F+        WL
Sbjct: 641 DAPFHEAPDKAGWFLTTSVAARHWL 665



 Score = 73.6 bits (179), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 52/219 (23%), Positives = 100/219 (45%)

Query: 448 VAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMI 507
           V + ++  ++ A +  +   Y+V +  L K      A  L+ EM+ +G  P+  T++ +I
Sbjct: 132 VVLALWWFLRNAEVRKEVILYNVALKALRKRRRWSDAEALWEEMLREGVQPDNATFSTVI 191

Query: 508 ALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWV 567
           +          A++ +  M + G  PD +TYS V++  G  G  + A  ++   R + W 
Sbjct: 192 SCARACGMPGKAVEWFEKMPDFGCSPDMLTYSAVIDAYGRAGDAETALRLYDRARAEKWQ 251

Query: 568 PDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHL 627
            D  +   ++ +   +GN   A   +E M  AG++PN+   N++L A  R  +      +
Sbjct: 252 LDPVICATVIRVHSSSGNFDGALNVFEEMKAAGVKPNLVVYNTVLDAMGRAMRPWVVKTI 311

Query: 628 LQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGFCHELM 666
            + +++    P+  TY  LL   T AR   D    + +M
Sbjct: 312 HRELVSQEAVPNKATYCCLLHAYTRARYGEDAMAVYRVM 350



 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 46/204 (22%), Positives = 81/204 (39%), Gaps = 36/204 (17%)

Query: 505 IMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRK 564
           +++     AR     L L+  ++NA    + + Y++ ++ L       +AEA++ EM R+
Sbjct: 119 VIVLNTTSARPAAVVLALWWFLRNAEVRKEVILYNVALKALRKRRRWSDAEALWEEMLRE 178

Query: 565 NWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDA 624
              PD   +  ++      G   KA EW+E M   G  P++ T ++++ A+ R G    A
Sbjct: 179 GVQPDNATFSTVISCARACGMPGKAVEWFEKMPDFGCSPDMLTYSAVIDAYGRAGDAETA 238

Query: 625 YHL----------------------------LQGMLNL-------GLKPSLQTYTLLLSC 649
             L                              G LN+       G+KP+L  Y  +L  
Sbjct: 239 LRLYDRARAEKWQLDPVICATVIRVHSSSGNFDGALNVFEEMKAAGVKPNLVVYNTVLDA 298

Query: 650 CTEARSPYDMGFCH-ELMAVSGHP 672
              A  P+ +   H EL++    P
Sbjct: 299 MGRAMRPWVVKTIHRELVSQEAVP 322


>gi|242069877|ref|XP_002450215.1| hypothetical protein SORBIDRAFT_05g002040 [Sorghum bicolor]
 gi|241936058|gb|EES09203.1| hypothetical protein SORBIDRAFT_05g002040 [Sorghum bicolor]
          Length = 862

 Score =  152 bits (383), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 100/410 (24%), Positives = 189/410 (46%), Gaps = 5/410 (1%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           G   D  TY+ ++  L +  +     K+   M+R G +PNV  Y  L+H Y     + + 
Sbjct: 369 GLDPDVVTYSLLLDYLCKNGKCTEARKIFYCMIRKGIKPNVTIYGILLHGYAARGAIADL 428

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
            D+   M   G  P+   +  ++  +AK   +D AM ++ +M   GLSPD  TY ++I+ 
Sbjct: 429 TDLLDLMVANGISPNNYIFNIVLCAYAKKAMIDEAMHIFSRMSQHGLSPDVVTYGILIDA 488

Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPD 534
           L K G +  A   F +M+N G  PN V +N ++        ++ A +L+ +M + G  P+
Sbjct: 489 LCKLGRVDDAVLKFNQMINDGVTPNSVVFNSLVYGLCTVDRWEKAEELFFEMWDQGVRPN 548

Query: 535 KVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYE 594
            V ++ +M  L + G +  A+ +   M R    P+   Y  L+     AG   +A +  +
Sbjct: 549 VVFFNTIMCNLCNEGQVMVAQRLIDSMERVGVRPNVISYNTLIGGHCLAGRTDEAAQLLD 608

Query: 595 AMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEAR 654
            M+  GL+P++ + ++LL  + + G++ +AY L + ML  G+ P   TY+ +L      R
Sbjct: 609 VMVSVGLKPDLISYDTLLRGYCKTGRIDNAYCLFREMLRKGVTPGAVTYSTILQGLFHTR 668

Query: 655 SPYDMGFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRESKRGLVD 714
              +    +  M  SG    ++  ++   G    N  D      + + S+D         
Sbjct: 669 RFSEAKELYLNMIKSGQQWDIYTYNIILNGLCKTNCVDEAFKIFQSLCSKDLRPNIITFT 728

Query: 715 AVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAVKEKGMSYWLINLHVMSDG 764
            ++D L K G K++A  ++       + P+ V     +Y ++  +++ +G
Sbjct: 729 IMIDVLFKGGRKKDAMDLFASIPSHGLVPNVV-----TYCIMMKNIIQEG 773



 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 123/448 (27%), Positives = 205/448 (45%), Gaps = 28/448 (6%)

Query: 330 ANQVLKQLQDHTVALGFFNWLRR------------QAGFKHDEHTYTTMVGILGRARQFG 377
           +N+V   L  +++  G F  L R            + G++ +E     ++  L  A++  
Sbjct: 83  SNKVRPDLCTYSILTGCFCRLGRIEHGFAAFGLILKTGWRVNEVVINQLLNGLCDAKRVD 142

Query: 378 -AINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVG---CEPDRVTY 433
            A++ LL +M   GC PNVV+ N L+        + EAL++   M   G   C P+ VTY
Sbjct: 143 EAMDILLRRMPEFGCMPNVVSCNTLLKGLCNEKRVEEALELLHTMAEDGGGNCTPNVVTY 202

Query: 434 CTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVN 493
            T+ID   KA  +D A  + + M   G+  D  TYS II+ L KA  +  A  +   M++
Sbjct: 203 NTIIDGLCKAQAVDRAEGVLQHMIDKGVKLDVVTYSTIIDGLCKAQAVDRAEGVLQHMID 262

Query: 494 QGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDE 553
           +G  P++VTYN +I    KA+    A  + + M + G +PD VTY+ +++ L     +D 
Sbjct: 263 KGVKPDVVTYNTIIDGLCKAQAVDRAEGVLQHMIDKGVKPDVVTYNTIIDGLCKAQAVDR 322

Query: 554 AEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLS 613
           A+ V   M  K+  PD   Y  L+  +   G  ++     E M   GL P+V T + LL 
Sbjct: 323 ADGVLQHMIDKDVKPDIQTYNCLIHGYLSTGEWKEVVRRLEEMYARGLDPDVVTYSLLLD 382

Query: 614 AFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGFCHELMAVSGHPA 673
              + G+ ++A  +   M+  G+KP++  Y +LL       +  D+    +LM  +G   
Sbjct: 383 YLCKNGKCTEARKIFYCMIRKGIKPNVTIYGILLHGYAARGAIADLTDLLDLMVANGISP 442

Query: 674 HMFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRESKRGLVDAVV------DFLHKSGLKE 727
           + ++ ++       + + D      E MH   R S+ GL   VV      D L K G  +
Sbjct: 443 NNYIFNIVLCAYAKKAMID------EAMHIFSRMSQHGLSPDVVTYGILIDALCKLGRVD 496

Query: 728 EAGSVWEVAAQKNVYPDAVKEKGMSYWL 755
           +A   +       V P++V    + Y L
Sbjct: 497 DAVLKFNQMINDGVTPNSVVFNSLVYGL 524



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 99/337 (29%), Positives = 156/337 (46%), Gaps = 38/337 (11%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           G K D  TY+T++  L +A+       +L  M+  G +P+VVTYN +I    +A  ++ A
Sbjct: 229 GVKLDVVTYSTIIDGLCKAQAVDRAEGVLQHMIDKGVKPDVVTYNTIIDGLCKAQAVDRA 288

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKA-------GFL------DVAMDM--------- 452
             V + M   G +PD VTY T+ID   KA       G L      DV  D+         
Sbjct: 289 EGVLQHMIDKGVKPDVVTYNTIIDGLCKAQAVDRADGVLQHMIDKDVKPDIQTYNCLIHG 348

Query: 453 -------------YKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPN 499
                         ++M A GL PD  TYS++++ L K G    A ++F  M+ +G  PN
Sbjct: 349 YLSTGEWKEVVRRLEEMYARGLDPDVVTYSLLLDYLCKNGKCTEARKIFYCMIRKGIKPN 408

Query: 500 LVTYNIMIALQAKARNYQSALKLYRDMQNA-GFEPDKVTYSIVMEVLGHCGYLDEAEAVF 558
           +  Y I++   A AR   + L    D+  A G  P+   ++IV+        +DEA  +F
Sbjct: 409 VTIYGILLHGYA-ARGAIADLTDLLDLMVANGISPNNYIFNIVLCAYAKKAMIDEAMHIF 467

Query: 559 AEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRV 618
           + M +    PD   YG+L+D   K G V  A   +  M+  G+ PN    NSL+     V
Sbjct: 468 SRMSQHGLSPDVVTYGILIDALCKLGRVDDAVLKFNQMINDGVTPNSVVFNSLVYGLCTV 527

Query: 619 GQLSDAYHLLQGMLNLGLKPSLQTY-TLLLSCCTEAR 654
            +   A  L   M + G++P++  + T++ + C E +
Sbjct: 528 DRWEKAEELFFEMWDQGVRPNVVFFNTIMCNLCNEGQ 564



 Score =  130 bits (327), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 120/466 (25%), Positives = 212/466 (45%), Gaps = 36/466 (7%)

Query: 342 VALGFFNWLRRQAG--FKHDEHTYTTMVGI---LGRARQ-FGAINKLLDQMVRDGCQPNV 395
           +A+  FN + R      + D  TY+ + G    LGR    F A   +L    + G + N 
Sbjct: 70  LAVSLFNRMARACSNKVRPDLCTYSILTGCFCRLGRIEHGFAAFGLIL----KTGWRVNE 125

Query: 396 VTYNRLIHSYGRANYLNEALDV-FKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYK 454
           V  N+L++    A  ++EA+D+  ++M   GC P+ V+  TL+        ++ A+++  
Sbjct: 126 VVINQLLNGLCDAKRVDEAMDILLRRMPEFGCMPNVVSCNTLLKGLCNEKRVEEALELLH 185

Query: 455 KMQAAG---LSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQA 511
            M   G    +P+  TY+ II+ L KA  +  A  +   M+++G   ++VTY+ +I    
Sbjct: 186 TMAEDGGGNCTPNVVTYNTIIDGLCKAQAVDRAEGVLQHMIDKGVKLDVVTYSTIIDGLC 245

Query: 512 KARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEP 571
           KA+    A  + + M + G +PD VTY+ +++ L     +D AE V   M  K   PD  
Sbjct: 246 KAQAVDRAEGVLQHMIDKGVKPDVVTYNTIIDGLCKAQAVDRAEGVLQHMIDKGVKPDVV 305

Query: 572 VYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGM 631
            Y  ++D   KA  V +A    + M+   ++P++ T N L+  +L  G+  +    L+ M
Sbjct: 306 TYNTIIDGLCKAQAVDRADGVLQHMIDKDVKPDIQTYNCLIHGYLSTGEWKEVVRRLEEM 365

Query: 632 LNLGLKPSLQTYTLLLS--C----CTEARSPYDMGFCHELMAVSGHPAHMFLLSMPSPGP 685
              GL P + TY+LLL   C    CTEAR  +   +C   M   G   ++ +  +   G 
Sbjct: 366 YARGLDPDVVTYSLLLDYLCKNGKCTEARKIF---YC---MIRKGIKPNVTIYGILLHGY 419

Query: 686 DGQNVRDHVGSFLEMMHSEDRESKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDA 745
             +     +   L++M +        + + V+    K  + +EA  ++   +Q  + PD 
Sbjct: 420 AARGAIADLTDLLDLMVANGISPNNYIFNIVLCAYAKKAMIDEAMHIFSRMSQHGLSPDV 479

Query: 746 VKEKGMSYWLINLHVMSDGTAVIALSRTLAWFRKQMLISGVGPSRI 791
           V    +   L  L  + D  AV+  +        QM+  GV P+ +
Sbjct: 480 VTYGILIDALCKLGRVDD--AVLKFN--------QMINDGVTPNSV 515



 Score =  121 bits (304), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 76/295 (25%), Positives = 142/295 (48%)

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
           Q G   D  TY  ++  L +  +        +QM+ DG  PN V +N L++     +   
Sbjct: 472 QHGLSPDVVTYGILIDALCKLGRVDDAVLKFNQMINDGVTPNSVVFNSLVYGLCTVDRWE 531

Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
           +A ++F +M   G  P+ V + T++      G + VA  +   M+  G+ P+  +Y+ +I
Sbjct: 532 KAEELFFEMWDQGVRPNVVFFNTIMCNLCNEGQVMVAQRLIDSMERVGVRPNVISYNTLI 591

Query: 473 NCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFE 532
                AG    A QL   MV+ G  P+L++Y+ ++    K     +A  L+R+M   G  
Sbjct: 592 GGHCLAGRTDEAAQLLDVMVSVGLKPDLISYDTLLRGYCKTGRIDNAYCLFREMLRKGVT 651

Query: 533 PDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEW 592
           P  VTYS +++ L H     EA+ ++  M +     D   Y ++++   K   V +A++ 
Sbjct: 652 PGAVTYSTILQGLFHTRRFSEAKELYLNMIKSGQQWDIYTYNIILNGLCKTNCVDEAFKI 711

Query: 593 YEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
           ++++    LRPN+ T   ++    + G+  DA  L   + + GL P++ TY +++
Sbjct: 712 FQSLCSKDLRPNIITFTIMIDVLFKGGRKKDAMDLFASIPSHGLVPNVVTYCIMM 766



 Score =  118 bits (296), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 73/258 (28%), Positives = 127/258 (49%)

Query: 381 KLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIH 440
           +L  +M   G +PNVV +N ++ +      +  A  +   M+ VG  P+ ++Y TLI  H
Sbjct: 535 ELFFEMWDQGVRPNVVFFNTIMCNLCNEGQVMVAQRLIDSMERVGVRPNVISYNTLIGGH 594

Query: 441 AKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNL 500
             AG  D A  +   M + GL PD  +Y  ++    K G +  A+ LF EM+ +G  P  
Sbjct: 595 CLAGRTDEAAQLLDVMVSVGLKPDLISYDTLLRGYCKTGRIDNAYCLFREMLRKGVTPGA 654

Query: 501 VTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAE 560
           VTY+ ++      R +  A +LY +M  +G + D  TY+I++  L     +DEA  +F  
Sbjct: 655 VTYSTILQGLFHTRRFSEAKELYLNMIKSGQQWDIYTYNIILNGLCKTNCVDEAFKIFQS 714

Query: 561 MRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQ 620
           +  K+  P+   + +++D+  K G  + A + + ++   GL PNV T   ++   ++ G 
Sbjct: 715 LCSKDLRPNIITFTIMIDVLFKGGRKKDAMDLFASIPSHGLVPNVVTYCIMMKNIIQEGL 774

Query: 621 LSDAYHLLQGMLNLGLKP 638
           L +  +L   M   G  P
Sbjct: 775 LDEFDNLFLAMEKSGCTP 792



 Score =  111 bits (278), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 68/265 (25%), Positives = 130/265 (49%)

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
           + G + +  +Y T++G    A +     +LLD MV  G +P++++Y+ L+  Y +   ++
Sbjct: 577 RVGVRPNVISYNTLIGGHCLAGRTDEAAQLLDVMVSVGLKPDLISYDTLLRGYCKTGRID 636

Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
            A  +F++M   G  P  VTY T++           A ++Y  M  +G   D +TY++I+
Sbjct: 637 NAYCLFREMLRKGVTPGAVTYSTILQGLFHTRRFSEAKELYLNMIKSGQQWDIYTYNIIL 696

Query: 473 NCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFE 532
           N L K   +  A ++F  + ++   PN++T+ IMI +  K    + A+ L+  + + G  
Sbjct: 697 NGLCKTNCVDEAFKIFQSLCSKDLRPNIITFTIMIDVLFKGGRKKDAMDLFASIPSHGLV 756

Query: 533 PDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEW 592
           P+ VTY I+M+ +   G LDE + +F  M +    PD  +   ++      G + +A  +
Sbjct: 757 PNVVTYCIMMKNIIQEGLLDEFDNLFLAMEKSGCTPDSVMLNAIIRSLLGRGEIMRAGAY 816

Query: 593 YEAMLQAGLRPNVPTCNSLLSAFLR 617
              + +        T + L+S F R
Sbjct: 817 LSKIDEMNFSLEASTTSLLISLFSR 841



 Score = 82.8 bits (203), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 92/395 (23%), Positives = 165/395 (41%), Gaps = 72/395 (18%)

Query: 447 DVAMDMYKKMQAA---GLSPDTFTYSVIINC---LGKAGHLQAAHQLFCE--------MV 492
           ++A+ ++ +M  A    + PD  TYS++  C   LG+  H  AA  L  +        ++
Sbjct: 69  ELAVSLFNRMARACSNKVRPDLCTYSILTGCFCRLGRIEHGFAAFGLILKTGWRVNEVVI 128

Query: 493 NQ-------------------------GCIPNLVTYNIMIALQAKARNYQSALKLYRDMQ 527
           NQ                         GC+PN+V+ N ++      +  + AL+L   M 
Sbjct: 129 NQLLNGLCDAKRVDEAMDILLRRMPEFGCMPNVVSCNTLLKGLCNEKRVEEALELLHTMA 188

Query: 528 NAG---FEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAG 584
             G     P+ VTY+ +++ L     +D AE V   M  K    D   Y  ++D   KA 
Sbjct: 189 EDGGGNCTPNVVTYNTIIDGLCKAQAVDRAEGVLQHMIDKGVKLDVVTYSTIIDGLCKAQ 248

Query: 585 NVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYT 644
            V +A    + M+  G++P+V T N+++    +   +  A  +LQ M++ G+KP + TY 
Sbjct: 249 AVDRAEGVLQHMIDKGVKPDVVTYNTIIDGLCKAQAVDRAEGVLQHMIDKGVKPDVVTYN 308

Query: 645 LLLSCCTEARSPYDMGFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDH----VGSFLEM 700
            ++    +A++         +    G   HM    +  P     N   H     G + E+
Sbjct: 309 TIIDGLCKAQA---------VDRADGVLQHMIDKDV-KPDIQTYNCLIHGYLSTGEWKEV 358

Query: 701 MHSEDRESKRGLVDAVV------DFLHKSGLKEEAGSVWEVAAQKNVYPDAVKEKGMSYW 754
           +   +    RGL   VV      D+L K+G   EA  ++    +K + P+      ++ +
Sbjct: 359 VRRLEEMYARGLDPDVVTYSLLLDYLCKNGKCTEARKIFYCMIRKGIKPN------VTIY 412

Query: 755 LINLHVMSDGTAVIALSRTLAWFRKQMLISGVGPS 789
            I LH  +   A+  L+  L      M+ +G+ P+
Sbjct: 413 GILLHGYAARGAIADLTDLLDL----MVANGISPN 443


>gi|297606902|ref|NP_001059180.2| Os07g0213300 [Oryza sativa Japonica Group]
 gi|215767816|dbj|BAH00045.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|255677604|dbj|BAF21094.2| Os07g0213300 [Oryza sativa Japonica Group]
          Length = 677

 Score =  152 bits (383), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 86/315 (27%), Positives = 160/315 (50%), Gaps = 1/315 (0%)

Query: 340 HTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYN 399
           H  AL  FN +++  G + D  +YT+++   GR+ Q     ++ ++M ++ C+PN V+YN
Sbjct: 239 HREALAIFNLIKKN-GLRPDIVSYTSLLNAYGRSAQPEKAREVFNKMKKNSCKPNKVSYN 297

Query: 400 RLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAA 459
            LI +YG A  L EA+ +  +M+  G +PD V+  TL+    +   +     + +  ++ 
Sbjct: 298 ALIDAYGSAGMLKEAVGLLHEMEKDGIQPDVVSISTLLAACGRCRQITRIETILEAARSR 357

Query: 460 GLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSA 519
           G+  +T  Y+  I      G  + A +L+  M      P+ VTYNI+I+  +K   Y  +
Sbjct: 358 GIDLNTVAYNSGIKSYLSFGDYEKALELYTSMRESNVKPDAVTYNILISGSSKLGKYTES 417

Query: 520 LKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDL 579
           L+ + DM ++     K  YS ++      G L EAE+ F+ M++    PD   Y  L+  
Sbjct: 418 LRFFEDMVDSKVSSTKEVYSSLIYSYIKQGKLSEAESTFSSMKKSGCFPDVLTYTTLIQA 477

Query: 580 WGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPS 639
           +   G  ++AW+ ++ M   G+ P+   C+SL+ AF + G+      L++ M    +  +
Sbjct: 478 YNAGGGWKRAWDLFKEMEVNGIPPDAIICSSLMEAFNKGGEPERVLQLMEFMKKKSIPLN 537

Query: 640 LQTYTLLLSCCTEAR 654
            ++Y  +++ CT  R
Sbjct: 538 QKSYFEIIASCTMIR 552



 Score =  132 bits (331), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 81/327 (24%), Positives = 157/327 (48%), Gaps = 6/327 (1%)

Query: 326 DAYQANQVLKQLQD---HTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKL 382
           D    N VL  L++   ++ A+ +F  + + A    D  T   ++  L +  Q G   +L
Sbjct: 115 DLVTHNIVLSALKNGAQYSKAISYFE-IMKGANVTSDTFTLNIIIHCLVKIGQCGEAIEL 173

Query: 383 LDQMV--RDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIH 440
            + M   R  C P+VVTY  ++HSY     +     +F  M   G +P+ V Y +L+  +
Sbjct: 174 FNSMRERRTKCPPDVVTYTSIMHSYCIYGQVENCKAIFDLMVAEGVKPNIVAYNSLLGAY 233

Query: 441 AKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNL 500
           A  G    A+ ++  ++  GL PD  +Y+ ++N  G++   + A ++F +M    C PN 
Sbjct: 234 ASRGMHREALAIFNLIKKNGLRPDIVSYTSLLNAYGRSAQPEKAREVFNKMKKNSCKPNK 293

Query: 501 VTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAE 560
           V+YN +I     A   + A+ L  +M+  G +PD V+ S ++   G C  +   E +   
Sbjct: 294 VSYNALIDAYGSAGMLKEAVGLLHEMEKDGIQPDVVSISTLLAACGRCRQITRIETILEA 353

Query: 561 MRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQ 620
            R +    +   Y   +  +   G+  KA E Y +M ++ ++P+  T N L+S   ++G+
Sbjct: 354 ARSRGIDLNTVAYNSGIKSYLSFGDYEKALELYTSMRESNVKPDAVTYNILISGSSKLGK 413

Query: 621 LSDAYHLLQGMLNLGLKPSLQTYTLLL 647
            +++    + M++  +  + + Y+ L+
Sbjct: 414 YTESLRFFEDMVDSKVSSTKEVYSSLI 440



 Score =  125 bits (314), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 78/261 (29%), Positives = 129/261 (49%), Gaps = 2/261 (0%)

Query: 398 YNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQ 457
           Y  +I  Y R N +++A  +F +MQ   C+PD   Y +LI  H++AG    A+++ + M 
Sbjct: 14  YGMMIRLYARHNQVDQARGLFFEMQEWRCKPDADIYNSLIHAHSRAGQWRWAINIMEDML 73

Query: 458 AAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQ 517
            A + P   TY+ +IN  G AG+ + A +L  +M   G  P+LVT+NI+++       Y 
Sbjct: 74  RAAIPPTRTTYNNVINACGAAGNWKKALELCKKMTENGVGPDLVTHNIVLSALKNGAQYS 133

Query: 518 SALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEM--RRKNWVPDEPVYGL 575
            A+  +  M+ A    D  T +I++  L   G   EA  +F  M  RR    PD   Y  
Sbjct: 134 KAISYFEIMKGANVTSDTFTLNIIIHCLVKIGQCGEAIELFNSMRERRTKCPPDVVTYTS 193

Query: 576 LVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLG 635
           ++  +   G V      ++ M+  G++PN+   NSLL A+   G   +A  +   +   G
Sbjct: 194 IMHSYCIYGQVENCKAIFDLMVAEGVKPNIVAYNSLLGAYASRGMHREALAIFNLIKKNG 253

Query: 636 LKPSLQTYTLLLSCCTEARSP 656
           L+P + +YT LL+    +  P
Sbjct: 254 LRPDIVSYTSLLNAYGRSAQP 274



 Score =  119 bits (298), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 86/342 (25%), Positives = 147/342 (42%), Gaps = 37/342 (10%)

Query: 350 LRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRAN 409
           ++ Q  +      Y  M+ +  R  Q      L  +M    C+P+   YN LIH++ RA 
Sbjct: 1   MKNQDNYCARNDIYGMMIRLYARHNQVDQARGLFFEMQEWRCKPDADIYNSLIHAHSRAG 60

Query: 410 YLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSP------ 463
               A+++ + M      P R TY  +I+    AG    A+++ KKM   G+ P      
Sbjct: 61  QWRWAINIMEDMLRAAIPPTRTTYNNVINACGAAGNWKKALELCKKMTENGVGPDLVTHN 120

Query: 464 -----------------------------DTFTYSVIINCLGKAGHLQAAHQLFCEMVNQ 494
                                        DTFT ++II+CL K G    A +LF  M  +
Sbjct: 121 IVLSALKNGAQYSKAISYFEIMKGANVTSDTFTLNIIIHCLVKIGQCGEAIELFNSMRER 180

Query: 495 --GCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLD 552
              C P++VTY  ++         ++   ++  M   G +P+ V Y+ ++      G   
Sbjct: 181 RTKCPPDVVTYTSIMHSYCIYGQVENCKAIFDLMVAEGVKPNIVAYNSLLGAYASRGMHR 240

Query: 553 EAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLL 612
           EA A+F  +++    PD   Y  L++ +G++    KA E +  M +   +PN  + N+L+
Sbjct: 241 EALAIFNLIKKNGLRPDIVSYTSLLNAYGRSAQPEKAREVFNKMKKNSCKPNKVSYNALI 300

Query: 613 SAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEAR 654
            A+   G L +A  LL  M   G++P + + + LL+ C   R
Sbjct: 301 DAYGSAGMLKEAVGLLHEMEKDGIQPDVVSISTLLAACGRCR 342



 Score = 88.2 bits (217), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 76/336 (22%), Positives = 142/336 (42%), Gaps = 36/336 (10%)

Query: 347 FNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYG 406
           FN +++ +  K ++ +Y  ++   G A        LL +M +DG QP+VV+ + L+ + G
Sbjct: 281 FNKMKKNSC-KPNKVSYNALIDAYGSAGMLKEAVGLLHEMEKDGIQPDVVSISTLLAACG 339

Query: 407 RA------------------------------NYLN-----EALDVFKQMQVVGCEPDRV 431
           R                               +YL+     +AL+++  M+    +PD V
Sbjct: 340 RCRQITRIETILEAARSRGIDLNTVAYNSGIKSYLSFGDYEKALELYTSMRESNVKPDAV 399

Query: 432 TYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEM 491
           TY  LI   +K G    ++  ++ M  + +S     YS +I    K G L  A   F  M
Sbjct: 400 TYNILISGSSKLGKYTESLRFFEDMVDSKVSSTKEVYSSLIYSYIKQGKLSEAESTFSSM 459

Query: 492 VNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYL 551
              GC P+++TY  +I        ++ A  L+++M+  G  PD +  S +ME     G  
Sbjct: 460 KKSGCFPDVLTYTTLIQAYNAGGGWKRAWDLFKEMEVNGIPPDAIICSSLMEAFNKGGEP 519

Query: 552 DEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSL 611
           +    +   M++K+   ++  Y  ++       + + A E  E +  +    +V T N +
Sbjct: 520 ERVLQLMEFMKKKSIPLNQKSYFEIIASCTMIRDWKTASEMIEYLDSSLSSISVGTLNHV 579

Query: 612 LSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
           L+   + G+  +   L   M+       L TY ++L
Sbjct: 580 LNFLGKCGKTENMMKLFYKMVTSCSTVGLSTYAVVL 615



 Score = 87.4 bits (215), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 69/280 (24%), Positives = 123/280 (43%), Gaps = 3/280 (1%)

Query: 339 DHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTY 398
           D+  AL  +  +R ++  K D  TY  ++    +  ++    +  + MV          Y
Sbjct: 378 DYEKALELYTSMR-ESNVKPDAVTYNILISGSSKLGKYTESLRFFEDMVDSKVSSTKEVY 436

Query: 399 NRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQA 458
           + LI+SY +   L+EA   F  M+  GC PD +TY TLI  +   G    A D++K+M+ 
Sbjct: 437 SSLIYSYIKQGKLSEAESTFSSMKKSGCFPDVLTYTTLIQAYNAGGGWKRAWDLFKEMEV 496

Query: 459 AGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIP-NLVTYNIMIALQAKARNYQ 517
            G+ PD    S ++    K G  +   QL  E + +  IP N  +Y  +IA     R+++
Sbjct: 497 NGIPPDAIICSSLMEAFNKGGEPERVLQLM-EFMKKKSIPLNQKSYFEIIASCTMIRDWK 555

Query: 518 SALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLV 577
           +A ++   + ++       T + V+  LG CG  +    +F +M           Y +++
Sbjct: 556 TASEMIEYLDSSLSSISVGTLNHVLNFLGKCGKTENMMKLFYKMVTSCSTVGLSTYAVVL 615

Query: 578 DLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLR 617
                 G  RK  E  + M  +G+ P +    ++L    R
Sbjct: 616 RNLLVVGKWRKYIEVLQWMEDSGVHPTLYMFQNVLPYIWR 655


>gi|115458614|ref|NP_001052907.1| Os04g0446100 [Oryza sativa Japonica Group]
 gi|38344550|emb|CAD40961.2| OSJNBa0027P08.18 [Oryza sativa Japonica Group]
 gi|113564478|dbj|BAF14821.1| Os04g0446100 [Oryza sativa Japonica Group]
          Length = 583

 Score =  152 bits (383), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 101/365 (27%), Positives = 185/365 (50%), Gaps = 11/365 (3%)

Query: 325 MDAYQANQVLKQL----QDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAIN 380
           ++AY  N+++  L    + H V   F  W++ +  +  D  ++  ++  + R  Q     
Sbjct: 213 VEAYAYNKLMSSLIGRGRVHDVVALFERWIQDRV-YSPDVWSFNVVIKGVCRVGQVQKAL 271

Query: 381 KLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVG-CEPDRVTYCTLIDI 439
           +L+++M   GC P+ VT+N L+    R N ++   +V +++Q  G C P+ VT+ ++I  
Sbjct: 272 ELVERMNEFGCSPDTVTHNILVDGLCRTNEVSRGHEVLRRLQRDGVCMPNVVTFTSVISG 331

Query: 440 HAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPN 499
           + KAG L+ AM +Y  M A+G+ P+T TY+V+IN  GK G L +A +++ +M    C P+
Sbjct: 332 YCKAGKLEDAMAVYNDMVASGIMPNTVTYNVLINGYGKVGDLGSAVEVYQQMTRLRCPPD 391

Query: 500 LVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFA 559
           +VT++ +I    +      AL+++ DM     +P+  T+SI++  L      DEA  +  
Sbjct: 392 VVTFSSLIDGYCRCGQLDDALRIWSDMAQHRIQPNVYTFSIIIHSLCKQNRSDEAIGLLN 451

Query: 560 EMR-RKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRV 618
           E+  R +  P   +Y  ++D+  K G V +A    + M + G RP+  T   L+  +   
Sbjct: 452 ELNLRPDIAPQAFIYNPVIDVLCKCGKVDEANLIRKGMEEKGCRPDKYTYTILIIGYCMK 511

Query: 619 GQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGFCHELMAVSGHPAHMFLL 678
            ++S+A      M+  G  P   T    +SC  +A  P ++   H +   SG  +   + 
Sbjct: 512 SRISEAIMFFHEMVEAGCSPDSITVNCFISCLLKAGMPNEVD--HVMRLASGGASS--IQ 567

Query: 679 SMPSP 683
            +PSP
Sbjct: 568 EVPSP 572



 Score =  119 bits (299), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 87/369 (23%), Positives = 165/369 (44%), Gaps = 39/369 (10%)

Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLI 402
           AL  F+ +    G+  D    + +V     A    A   LL +    GC+     YN+L+
Sbjct: 163 ALQLFDQMTTHYGYSPDARFLSFLVSSCTCANLLDASATLLSKASEFGCRVEAYAYNKLM 222

Query: 403 HSYGRANYLNEALDVFKQ-MQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGL 461
            S      +++ + +F++ +Q     PD  ++  +I    + G +  A+++ ++M   G 
Sbjct: 223 SSLIGRGRVHDVVALFERWIQDRVYSPDVWSFNVVIKGVCRVGQVQKALELVERMNEFGC 282

Query: 462 SPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQG-CIPNLVTYNIMIALQAKARNYQSAL 520
           SPDT T++++++ L +   +   H++   +   G C+PN+VT+  +I+   KA   + A+
Sbjct: 283 SPDTVTHNILVDGLCRTNEVSRGHEVLRRLQRDGVCMPNVVTFTSVISGYCKAGKLEDAM 342

Query: 521 KLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLW 580
            +Y DM  +G  P+ VTY++++   G  G L  A  V+ +M R    PD   +  L+D +
Sbjct: 343 AVYNDMVASGIMPNTVTYNVLINGYGKVGDLGSAVEVYQQMTRLRCPPDVVTFSSLIDGY 402

Query: 581 GKAGNVRKAWEWYEAMLQAGLRPNVPT--------C------------------------ 608
            + G +  A   +  M Q  ++PNV T        C                        
Sbjct: 403 CRCGQLDDALRIWSDMAQHRIQPNVYTFSIIIHSLCKQNRSDEAIGLLNELNLRPDIAPQ 462

Query: 609 ----NSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYT-LLLSCCTEARSPYDMGFCH 663
               N ++    + G++ +A  + +GM   G +P   TYT L++  C ++R    + F H
Sbjct: 463 AFIYNPVIDVLCKCGKVDEANLIRKGMEEKGCRPDKYTYTILIIGYCMKSRISEAIMFFH 522

Query: 664 ELMAVSGHP 672
           E++     P
Sbjct: 523 EMVEAGCSP 531



 Score =  119 bits (297), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 98/389 (25%), Positives = 179/389 (46%), Gaps = 41/389 (10%)

Query: 361 HTYTTMVGILGRA-RQFGAINKLLDQMVRD-GCQPNVVTYNRLIHSYGRANYLNEALDVF 418
           H+   ++ +L R+ RQ  A+ +L DQM    G  P+    + L+ S   AN L+ +  + 
Sbjct: 145 HSCQQIIVVLCRSGRQADAL-QLFDQMTTHYGYSPDARFLSFLVSSCTCANLLDASATLL 203

Query: 419 KQMQVVGCEPDRVTYCTLID-IHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGK 477
            +    GC  +   Y  L+  +  +    DV     + +Q    SPD ++++V+I  + +
Sbjct: 204 SKASEFGCRVEAYAYNKLMSSLIGRGRVHDVVALFERWIQDRVYSPDVWSFNVVIKGVCR 263

Query: 478 AGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF-EPDKV 536
            G +Q A +L   M   GC P+ VT+NI++    +        ++ R +Q  G   P+ V
Sbjct: 264 VGQVQKALELVERMNEFGCSPDTVTHNILVDGLCRTNEVSRGHEVLRRLQRDGVCMPNVV 323

Query: 537 TYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAM 596
           T++ V+      G L++A AV+ +M     +P+   Y +L++ +GK G++  A E Y+ M
Sbjct: 324 TFTSVISGYCKAGKLEDAMAVYNDMVASGIMPNTVTYNVLINGYGKVGDLGSAVEVYQQM 383

Query: 597 LQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL-SCCTEARS 655
            +    P+V T +SL+  + R GQL DA  +   M    ++P++ T+++++ S C + RS
Sbjct: 384 TRLRCPPDVVTFSSLIDGYCRCGQLDDALRIWSDMAQHRIQPNVYTFSIIIHSLCKQNRS 443

Query: 656 PYDMGFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRESKRGLVDA 715
              +G  +EL                       N+R             D   +  + + 
Sbjct: 444 DEAIGLLNEL-----------------------NLR------------PDIAPQAFIYNP 468

Query: 716 VVDFLHKSGLKEEAGSVWEVAAQKNVYPD 744
           V+D L K G  +EA  + +   +K   PD
Sbjct: 469 VIDVLCKCGKVDEANLIRKGMEEKGCRPD 497


>gi|115480461|ref|NP_001063824.1| Os09g0542800 [Oryza sativa Japonica Group]
 gi|32526676|dbj|BAC79199.1| chloroplast RNA processing 1 -like protein [Oryza sativa Japonica
           Group]
 gi|113632057|dbj|BAF25738.1| Os09g0542800 [Oryza sativa Japonica Group]
 gi|125606498|gb|EAZ45534.1| hypothetical protein OsJ_30195 [Oryza sativa Japonica Group]
 gi|215768653|dbj|BAH00882.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 543

 Score =  152 bits (383), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 85/253 (33%), Positives = 135/253 (53%), Gaps = 3/253 (1%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           +QAG   + +TYT ++  + RA Q     +LL QM+  GC PN  T+N ++ ++ +A   
Sbjct: 276 QQAGVTPNVYTYTAVIDAMYRAGQVPRAQELLCQMIDSGCPPNTATFNAIMRAHVKAGRS 335

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGF--LDVAMDMYKKMQAAGLSPDTFTYS 469
            + L V  QM+ +GCEPD +TY  L++ H   G   LD AM M  +M A G  PD  T++
Sbjct: 336 EQVLQVHNQMRQLGCEPDIITYNFLMETHCGKGQSNLDAAMKMLTRMIAKGCIPDCHTFN 395

Query: 470 VIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNA 529
            ++  +   G++ AA +L+  M    C PN+VTYN+++ L    ++    L++ +DM   
Sbjct: 396 PMLKLVLVLGNVNAARKLYERMQELQCKPNVVTYNLLMRLFNLEKSMDMVLRIKKDMDAQ 455

Query: 530 GFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEM-RRKNWVPDEPVYGLLVDLWGKAGNVRK 588
           G EP+  TY+ ++E     G    A     EM   K   P +PVY +++ L  KAG +R+
Sbjct: 456 GVEPNVNTYAALIEAFCGRGNWKRAHMTLREMVEEKALKPTKPVYDMVLALLRKAGQLRR 515

Query: 589 AWEWYEAMLQAGL 601
             E  E M+  G 
Sbjct: 516 HEELVEMMVDRGF 528



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 91/324 (28%), Positives = 150/324 (46%), Gaps = 41/324 (12%)

Query: 363 YTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQ 422
           Y  M+ +L +   F     LLD+M       +      LI  Y RA   +EA D+F++M+
Sbjct: 147 YAAMIDLLAKHHHFPLARHLLDEMRERSVPISAQLILALIRRYVRAEMPSEASDLFRRME 206

Query: 423 VVGC-----------------------------------EPDRVTYCTLIDIHAKAGFLD 447
             G                                     PD V Y TL+    ++G L+
Sbjct: 207 EYGAGAPDPATLASLLGALSKKRLASEAQAMFDSYKSVFTPDVVLYTTLVHAWCRSGRLN 266

Query: 448 VAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMI 507
            A  ++ +MQ AG++P+ +TY+ +I+ + +AG +  A +L C+M++ GC PN  T+N ++
Sbjct: 267 EAERVFAEMQQAGVTPNVYTYTAVIDAMYRAGQVPRAQELLCQMIDSGCPPNTATFNAIM 326

Query: 508 ALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGY----LDEAEAVFAEMRR 563
               KA   +  L+++  M+  G EPD +TY+ +ME   HCG     LD A  +   M  
Sbjct: 327 RAHVKAGRSEQVLQVHNQMRQLGCEPDIITYNFLMET--HCGKGQSNLDAAMKMLTRMIA 384

Query: 564 KNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSD 623
           K  +PD   +  ++ L    GNV  A + YE M +   +PNV T N L+  F     +  
Sbjct: 385 KGCIPDCHTFNPMLKLVLVLGNVNAARKLYERMQELQCKPNVVTYNLLMRLFNLEKSMDM 444

Query: 624 AYHLLQGMLNLGLKPSLQTYTLLL 647
              + + M   G++P++ TY  L+
Sbjct: 445 VLRIKKDMDAQGVEPNVNTYAALI 468



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 78/284 (27%), Positives = 140/284 (49%), Gaps = 3/284 (1%)

Query: 356 FKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEAL 415
           F  D   YTT+V    R+ +     ++  +M + G  PNV TY  +I +  RA  +  A 
Sbjct: 245 FTPDVVLYTTLVHAWCRSGRLNEAERVFAEMQQAGVTPNVYTYTAVIDAMYRAGQVPRAQ 304

Query: 416 DVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII--N 473
           ++  QM   GC P+  T+  ++  H KAG  +  + ++ +M+  G  PD  TY+ ++  +
Sbjct: 305 ELLCQMIDSGCPPNTATFNAIMRAHVKAGRSEQVLQVHNQMRQLGCEPDIITYNFLMETH 364

Query: 474 CLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEP 533
           C     +L AA ++   M+ +GCIP+  T+N M+ L     N  +A KLY  MQ    +P
Sbjct: 365 CGKGQSNLDAAMKMLTRMIAKGCIPDCHTFNPMLKLVLVLGNVNAARKLYERMQELQCKP 424

Query: 534 DKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWY 593
           + VTY+++M +      +D    +  +M  +   P+   Y  L++ +   GN ++A    
Sbjct: 425 NVVTYNLLMRLFNLEKSMDMVLRIKKDMDAQGVEPNVNTYAALIEAFCGRGNWKRAHMTL 484

Query: 594 EAML-QAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGL 636
             M+ +  L+P  P  + +L+   + GQL     L++ M++ G 
Sbjct: 485 REMVEEKALKPTKPVYDMVLALLRKAGQLRRHEELVEMMVDRGF 528



 Score = 76.3 bits (186), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 57/200 (28%), Positives = 97/200 (48%), Gaps = 10/200 (5%)

Query: 460 GLSPDTFT--YSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIAL---QAKAR 514
            L PD+    Y+ +I+ L K  H   A  L  EM  +  +P  ++  +++AL     +A 
Sbjct: 137 SLPPDSLPALYAAMIDLLAKHHHFPLARHLLDEM-RERSVP--ISAQLILALIRRYVRAE 193

Query: 515 NYQSALKLYRDMQNAGF-EPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVY 573
               A  L+R M+  G   PD  T + ++  L       EA+A+F +  +  + PD  +Y
Sbjct: 194 MPSEASDLFRRMEEYGAGAPDPATLASLLGALSKKRLASEAQAMF-DSYKSVFTPDVVLY 252

Query: 574 GLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLN 633
             LV  W ++G + +A   +  M QAG+ PNV T  +++ A  R GQ+  A  LL  M++
Sbjct: 253 TTLVHAWCRSGRLNEAERVFAEMQQAGVTPNVYTYTAVIDAMYRAGQVPRAQELLCQMID 312

Query: 634 LGLKPSLQTYTLLLSCCTEA 653
            G  P+  T+  ++    +A
Sbjct: 313 SGCPPNTATFNAIMRAHVKA 332



 Score = 68.9 bits (167), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 43/140 (30%), Positives = 68/140 (48%), Gaps = 1/140 (0%)

Query: 359 DEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVF 418
           D HT+  M+ ++       A  KL ++M    C+PNVVTYN L+  +     ++  L + 
Sbjct: 390 DCHTFNPMLKLVLVLGNVNAARKLYERMQELQCKPNVVTYNLLMRLFNLEKSMDMVLRIK 449

Query: 419 KQMQVVGCEPDRVTYCTLIDIHAKAGFLDVA-MDMYKKMQAAGLSPDTFTYSVIINCLGK 477
           K M   G EP+  TY  LI+     G    A M + + ++   L P    Y +++  L K
Sbjct: 450 KDMDAQGVEPNVNTYAALIEAFCGRGNWKRAHMTLREMVEEKALKPTKPVYDMVLALLRK 509

Query: 478 AGHLQAAHQLFCEMVNQGCI 497
           AG L+   +L   MV++G I
Sbjct: 510 AGQLRRHEELVEMMVDRGFI 529


>gi|242060656|ref|XP_002451617.1| hypothetical protein SORBIDRAFT_04g004710 [Sorghum bicolor]
 gi|241931448|gb|EES04593.1| hypothetical protein SORBIDRAFT_04g004710 [Sorghum bicolor]
          Length = 593

 Score =  152 bits (383), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 83/301 (27%), Positives = 156/301 (51%), Gaps = 7/301 (2%)

Query: 361 HTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQ 420
            TYT M+ + G+A+Q  +  K+ ++M   GC+PN+ TY  L++++ R     +A +VF++
Sbjct: 271 ETYTLMINVYGKAKQPMSSLKVFNEMKTIGCKPNICTYTALVNAFAREGLCEKAEEVFEE 330

Query: 421 MQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGH 480
           MQ  G EPD   Y  L++ +++AG    A +++  M+  G  PD  +Y+++++  G+AG 
Sbjct: 331 MQQAGHEPDVYAYNALMEAYSRAGLPQGASEIFSLMEHMGCEPDRASYNILVDAYGRAGL 390

Query: 481 LQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSI 540
            Q A   F E+  QG  P + ++ ++++  AK+ N     ++   +  +G  PD    + 
Sbjct: 391 HQEAEAAFQELKQQGMRPTMKSHMLLLSAHAKSGNVARCEEVMAQLHKSGLRPDTFALNA 450

Query: 541 VMEVLGHCGYLDEAEAVFAEMRRKNWV-------PDEPVYGLLVDLWGKAGNVRKAWEWY 593
           ++   G  G LD+ E +   M R           PD   Y +LV+++G+AG + +    +
Sbjct: 451 MLNAYGRAGRLDDMERLLGAMERGGDDDAGGGAAPDTSTYNVLVNVYGRAGYLDRMEAAF 510

Query: 594 EAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEA 653
            A+   GL  +V T  S + A+ R  +      + + M++ G  P   T  +LL+ C++ 
Sbjct: 511 RALAARGLAADVVTWTSRIGAYARKKEYGRCLEIFEEMVDAGCYPDAGTAKVLLAACSDE 570

Query: 654 R 654
           R
Sbjct: 571 R 571



 Score =  141 bits (355), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 82/291 (28%), Positives = 144/291 (49%)

Query: 348 NWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGR 407
            W+  ++ F+ D   Y  ++   G+ RQ      +   ++   C P   TY  L+ +Y  
Sbjct: 153 EWILYRSSFRPDIICYNLLIDAYGQKRQLNKAESIYMALLEAHCVPTEDTYALLLRAYCN 212

Query: 408 ANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFT 467
           +  L+ A  V  +MQ  G  P    Y   +D   KA   + A+++Y++M+      +T T
Sbjct: 213 SGQLHRAEGVISEMQKNGLPPTATVYNAYLDGLLKARCSEKAVEVYQRMKKERCRTNTET 272

Query: 468 YSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQ 527
           Y+++IN  GKA    ++ ++F EM   GC PN+ TY  ++   A+    + A +++ +MQ
Sbjct: 273 YTLMINVYGKAKQPMSSLKVFNEMKTIGCKPNICTYTALVNAFAREGLCEKAEEVFEEMQ 332

Query: 528 NAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVR 587
            AG EPD   Y+ +ME     G    A  +F+ M      PD   Y +LVD +G+AG  +
Sbjct: 333 QAGHEPDVYAYNALMEAYSRAGLPQGASEIFSLMEHMGCEPDRASYNILVDAYGRAGLHQ 392

Query: 588 KAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKP 638
           +A   ++ + Q G+RP + +   LLSA  + G ++    ++  +   GL+P
Sbjct: 393 EAEAAFQELKQQGMRPTMKSHMLLLSAHAKSGNVARCEEVMAQLHKSGLRP 443



 Score = 85.1 bits (209), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 62/253 (24%), Positives = 110/253 (43%), Gaps = 45/253 (17%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           +QAG + D + Y  ++    RA      +++   M   GC+P+  +YN L+ +YGRA   
Sbjct: 332 QQAGHEPDVYAYNALMEAYSRAGLPQGASEIFSLMEHMGCEPDRASYNILVDAYGRAGLH 391

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTF----- 466
            EA   F++++  G  P   ++  L+  HAK+G +    ++  ++  +GL PDTF     
Sbjct: 392 QEAEAAFQELKQQGMRPTMKSHMLLLSAHAKSGNVARCEEVMAQLHKSGLRPDTFALNAM 451

Query: 467 -------------------------------------TYSVIINCLGKAGHLQAAHQLFC 489
                                                TY+V++N  G+AG+L      F 
Sbjct: 452 LNAYGRAGRLDDMERLLGAMERGGDDDAGGGAAPDTSTYNVLVNVYGRAGYLDRMEAAFR 511

Query: 490 EMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCG 549
            +  +G   ++VT+   I   A+ + Y   L+++ +M +AG  PD  T  +   +L  C 
Sbjct: 512 ALAARGLAADVVTWTSRIGAYARKKEYGRCLEIFEEMVDAGCYPDAGTAKV---LLAACS 568

Query: 550 YLDEAEAVFAEMR 562
              + E V A +R
Sbjct: 569 DERQVEQVTAIVR 581


>gi|255566203|ref|XP_002524089.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223536657|gb|EEF38299.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 1072

 Score =  152 bits (383), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 88/342 (25%), Positives = 173/342 (50%), Gaps = 2/342 (0%)

Query: 297 VVESVSRILRQWKWGPLAEEALGNTNYSMDAYQANQVLKQ-LQDHTVALGFFNWLRRQAG 355
           VV  ++ I+R        EE L N  +  +     +VLK+  +   +A  FF+W++ + G
Sbjct: 146 VVREITGIVRAENDLVAMEERLENLGFYFEPEIVEKVLKRCFKVPHLAFRFFSWVKMRDG 205

Query: 356 FKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEAL 415
           F H   TY TM+ I G A++F  ++ L+++M ++ C+ ++ T++ LI  +G+A  + +AL
Sbjct: 206 FCHTTKTYYTMLYIAGEAKEFKVVDDLVEEMEKNSCEKDIKTWSILISQFGKAKLIGKAL 265

Query: 416 DVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCL 475
             F++M+  GCEPD   Y  ++     AG  +VA+  YK+M    +  D   Y +++  +
Sbjct: 266 LFFEKMKTSGCEPDEKIYKMMVHSLCNAGKGEVALAFYKEMVQKDMRLDLSLYKILLISM 325

Query: 476 GKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDK 535
            K+G + A H +  +M     IP       ++     A   + AL+L RD++N     D 
Sbjct: 326 AKSGDVGAVHLVANDMSRLSQIPEHDVNVCILKSFCVAGKIREALELIRDLKNKDILIDY 385

Query: 536 VTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEA 595
                +++ L     + +A  +   M+++N + D  +YG++++ + +  ++ KA E ++ 
Sbjct: 386 EYLGTLVKGLCRGDRITDAVEIVEIMKKRNLI-DAKIYGIIINGYLRKKDLSKAIELFQR 444

Query: 596 MLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLK 637
           M ++G++P   T   L+     + Q    + L   ML  G++
Sbjct: 445 MKESGIQPITSTYTELMQCLFNLNQYDKGFELFNEMLERGIR 486



 Score =  127 bits (319), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 98/360 (27%), Positives = 164/360 (45%), Gaps = 6/360 (1%)

Query: 298  VESVSRILRQWKWGPLAEEALGNTNYSMDAYQANQVLKQLQDH-TVALGFFNWLRRQAGF 356
            ++ + +IL   K   + +EAL             ++L     H   AL FF+WL  Q G+
Sbjct: 656  LKEICKILSSSKDWCIMQEALEKCTLQFTPGLVLEILHNCSMHGNAALKFFSWLGVQTGY 715

Query: 357  KHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALD 416
             H + TY   + I GR + F  +  L  +M R GC     T+  +I  YGR      +L 
Sbjct: 716  CHTKETYNMAMKISGREKDFKHMRSLFYEMRRKGCLITPDTWAIMIMQYGRTGLTEISLK 775

Query: 417  VFKQMQVVGCEPDRVTY-CTLIDIHAKAGF-LDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
             F +M+  G  P+  TY   LI +  K G  +D A+ ++ +M      PD       ++C
Sbjct: 776  TFTEMKDNGYIPNDSTYKYLLISLCGKKGRKVDEAIKIFHEMIRTRYIPDREVVGTYLSC 835

Query: 475  LGKAGHLQAAHQLFCEMVNQG-CIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEP 533
            L +AG L  A +    +   G  IP  ++Y++ I    ++   + AL L  ++       
Sbjct: 836  LCEAGRLSEARKSTDSLCRIGYTIP--LSYSLYIRALCRSGRLEEALSLLDEVGTERSTL 893

Query: 534  DKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWY 593
            D+ TY  ++  L   G  +EA A    M+     P   VY  L+  + K   + KA + +
Sbjct: 894  DQYTYGTLVHGLLRKGRQEEALAKIESMKEAGINPTVHVYTSLIVHFFKEKQIEKAMQIF 953

Query: 594  EAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEA 653
            E M Q G  P V T ++L+  ++ + +  DA+ +L  +   G KP  +TY++ +SC  +A
Sbjct: 954  EKMQQDGCEPTVVTYSALIRGYMNMERADDAWSVLNHLKLKGPKPDFKTYSMFISCLCKA 1013



 Score = 91.3 bits (225), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 53/159 (33%), Positives = 84/159 (52%), Gaps = 3/159 (1%)

Query: 359  DEHTYTTMV-GILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDV 417
            D++TY T+V G+L + RQ  A+ K+ + M   G  P V  Y  LI  + +   + +A+ +
Sbjct: 894  DQYTYGTLVHGLLRKGRQEEALAKI-ESMKEAGINPTVHVYTSLIVHFFKEKQIEKAMQI 952

Query: 418  FKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGK 477
            F++MQ  GCEP  VTY  LI  +      D A  +   ++  G  PD  TYS+ I+CL K
Sbjct: 953  FEKMQQDGCEPTVVTYSALIRGYMNMERADDAWSVLNHLKLKGPKPDFKTYSMFISCLCK 1012

Query: 478  AGHLQAAHQLFCEMVNQGCIPNLVTY-NIMIALQAKARN 515
            AG  + A QL   M+  G +P+ + +  +   L  + +N
Sbjct: 1013 AGKSEEALQLLSRMLEDGIVPSTINFRTVFFGLNCEGKN 1051



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 38/129 (29%), Positives = 66/129 (51%), Gaps = 3/129 (2%)

Query: 352  RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
            ++AG     H YT+++    + +Q     ++ ++M +DGC+P VVTY+ LI  Y      
Sbjct: 922  KEAGINPTVHVYTSLIVHFFKEKQIEKAMQIFEKMQQDGCEPTVVTYSALIRGYMNMERA 981

Query: 412  NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
            ++A  V   +++ G +PD  TY   I    KAG  + A+ +  +M   G+ P T  +  +
Sbjct: 982  DDAWSVLNHLKLKGPKPDFKTYSMFISCLCKAGKSEEALQLLSRMLEDGIVPSTINFRTV 1041

Query: 472  ---INCLGK 477
               +NC GK
Sbjct: 1042 FFGLNCEGK 1050



 Score = 71.2 bits (173), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 54/210 (25%), Positives = 92/210 (43%), Gaps = 1/210 (0%)

Query: 359  DEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVF 418
            D     T +  L  A +     K  D + R G    + +Y+  I +  R+  L EAL + 
Sbjct: 825  DREVVGTYLSCLCEAGRLSEARKSTDSLCRIGYTIPL-SYSLYIRALCRSGRLEEALSLL 883

Query: 419  KQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKA 478
             ++       D+ TY TL+    + G  + A+   + M+ AG++P    Y+ +I    K 
Sbjct: 884  DEVGTERSTLDQYTYGTLVHGLLRKGRQEEALAKIESMKEAGINPTVHVYTSLIVHFFKE 943

Query: 479  GHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTY 538
              ++ A Q+F +M   GC P +VTY+ +I           A  +   ++  G +PD  TY
Sbjct: 944  KQIEKAMQIFEKMQQDGCEPTVVTYSALIRGYMNMERADDAWSVLNHLKLKGPKPDFKTY 1003

Query: 539  SIVMEVLGHCGYLDEAEAVFAEMRRKNWVP 568
            S+ +  L   G  +EA  + + M     VP
Sbjct: 1004 SMFISCLCKAGKSEEALQLLSRMLEDGIVP 1033



 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 58/279 (20%), Positives = 118/279 (42%), Gaps = 35/279 (12%)

Query: 342 VALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRL 401
           VAL F+  +  Q   + D   Y  ++  + ++   GA++ + + M R    P       +
Sbjct: 298 VALAFYKEMV-QKDMRLDLSLYKILLISMAKSGDVGAVHLVANDMSRLSQIPEHDVNVCI 356

Query: 402 IHSYGRANYLNEALDVFKQMQ--------------VVG-CEPDRVT-YCTLIDIHAKAGF 445
           + S+  A  + EAL++ + ++              V G C  DR+T    +++I  K   
Sbjct: 357 LKSFCVAGKIREALELIRDLKNKDILIDYEYLGTLVKGLCRGDRITDAVEIVEIMKKRNL 416

Query: 446 LDV------------------AMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQL 487
           +D                   A++++++M+ +G+ P T TY+ ++ CL          +L
Sbjct: 417 IDAKIYGIIINGYLRKKDLSKAIELFQRMKESGIQPITSTYTELMQCLFNLNQYDKGFEL 476

Query: 488 FCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGH 547
           F EM+ +G   + V    ++A   +  +   A +++  M++ G  P   +YSI ++ L  
Sbjct: 477 FNEMLERGIRVDSVATMAIVAAHVRQNHISEAWEVFNTMKDKGANPTWKSYSIFIKELCR 536

Query: 548 CGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNV 586
               DE   V  +M+      +  ++ L +    K G V
Sbjct: 537 VSRTDEILKVLYKMQASKIFINNDIFNLAIAFMEKKGEV 575



 Score = 56.6 bits (135), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 48/217 (22%), Positives = 90/217 (41%), Gaps = 8/217 (3%)

Query: 502 TYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEM 561
           TY  M+ +  +A+ ++    L  +M+    E D  T+SI++   G    + +A   F +M
Sbjct: 212 TYYTMLYIAGEAKEFKVVDDLVEEMEKNSCEKDIKTWSILISQFGKAKLIGKALLFFEKM 271

Query: 562 RRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQL 621
           +     PDE +Y ++V     AG    A  +Y+ M+Q  +R ++     LL +  + G +
Sbjct: 272 KTSGCEPDEKIYKMMVHSLCNAGKGEVALAFYKEMVQKDMRLDLSLYKILLISMAKSGDV 331

Query: 622 SDAYHLLQGMLNLGLKPSLQTYTLLL-SCCTEARSPYDMGFCHELMAVSGHPAHMFLLSM 680
              + +   M  L   P       +L S C   +    +    +L        + +L ++
Sbjct: 332 GAVHLVANDMSRLSQIPEHDVNVCILKSFCVAGKIREALELIRDLKNKDILIDYEYLGTL 391

Query: 681 PSPGPDGQNVRDHVGSFLEMMHSEDRESKRGLVDAVV 717
                 G  + D V   +E+M       KR L+DA +
Sbjct: 392 VKGLCRGDRITDAV-EIVEIM------KKRNLIDAKI 421


>gi|449461475|ref|XP_004148467.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
           mitochondrial-like [Cucumis sativus]
          Length = 775

 Score =  152 bits (383), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 107/389 (27%), Positives = 187/389 (48%), Gaps = 8/389 (2%)

Query: 362 TYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQM 421
           T+ T++  L +  +      L D+++  G  PNVV+YN +I  + R + +N A  V+K+M
Sbjct: 369 TFNTLLSWLCKEGKMNEACNLWDEVIAKGISPNVVSYNNIILGHCRKDNINAACKVYKEM 428

Query: 422 QVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHL 481
              G  P+ VT+  L+D + K G ++ A  ++ +M+ A + P   T  +II  L KAG  
Sbjct: 429 LDNGFTPNAVTFTILMDGYFKKGDIENAFSIFHRMKDANILPTDTTLGIIIKGLCKAGRS 488

Query: 482 QAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIV 541
                LF + V+QG +P  + YN +I    K  N   A  +YR+M   G  P  VTY+ +
Sbjct: 489 FEGRDLFNKFVSQGFVPTCMPYNTIIDGFIKEGNINLASNVYREMCEVGITPSTVTYTSL 548

Query: 542 MEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGL 601
           ++       +D A  +  +M+RK    D   YG L+D + K  +++ A E    +  AGL
Sbjct: 549 IDGFCKGNNIDLALKLLNDMKRKGLKMDIKAYGTLIDGFCKRRDMKSAHELLNELRGAGL 608

Query: 602 RPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEA-RSPYDMG 660
            PN    NS+++ F  +  + +A  L + M+N G+   L+TYT L+    ++ R  Y   
Sbjct: 609 SPNRFIYNSMITGFKNMNNVEEAIDLYKKMVNEGIPCDLKTYTSLIDGLLKSGRLLYASD 668

Query: 661 FCHELMAVSGHP---AHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRESKRGLVDAVV 717
              E+++    P   AH  L++        +N R      LE M+ ++      + + ++
Sbjct: 669 IHTEMLSKGILPDDRAHTVLINGLCNKGQFENAR----KILEDMNGKNMIPSVLIYNTLI 724

Query: 718 DFLHKSGLKEEAGSVWEVAAQKNVYPDAV 746
               K G  +EA  + +    + + PD +
Sbjct: 725 AGHFKEGNLQEAFRLHDEMLDRGLVPDNI 753



 Score =  135 bits (341), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 87/306 (28%), Positives = 143/306 (46%), Gaps = 1/306 (0%)

Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLI 402
           A   F+ ++       D      + G+    R F     L ++ V  G  P  + YN +I
Sbjct: 456 AFSIFHRMKDANILPTDTTLGIIIKGLCKAGRSFEG-RDLFNKFVSQGFVPTCMPYNTII 514

Query: 403 HSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLS 462
             + +   +N A +V+++M  VG  P  VTY +LID   K   +D+A+ +   M+  GL 
Sbjct: 515 DGFIKEGNINLASNVYREMCEVGITPSTVTYTSLIDGFCKGNNIDLALKLLNDMKRKGLK 574

Query: 463 PDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKL 522
            D   Y  +I+   K   +++AH+L  E+   G  PN   YN MI       N + A+ L
Sbjct: 575 MDIKAYGTLIDGFCKRRDMKSAHELLNELRGAGLSPNRFIYNSMITGFKNMNNVEEAIDL 634

Query: 523 YRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGK 582
           Y+ M N G   D  TY+ +++ L   G L  A  +  EM  K  +PD+  + +L++    
Sbjct: 635 YKKMVNEGIPCDLKTYTSLIDGLLKSGRLLYASDIHTEMLSKGILPDDRAHTVLINGLCN 694

Query: 583 AGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQT 642
            G    A +  E M    + P+V   N+L++   + G L +A+ L   ML+ GL P   T
Sbjct: 695 KGQFENARKILEDMNGKNMIPSVLIYNTLIAGHFKEGNLQEAFRLHDEMLDRGLVPDNIT 754

Query: 643 YTLLLS 648
           Y +L++
Sbjct: 755 YDILVN 760



 Score =  129 bits (325), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 85/333 (25%), Positives = 157/333 (47%), Gaps = 40/333 (12%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           R AG+   E T+T+++    +        +L D MV  G   N+     L+  Y     L
Sbjct: 220 RAAGWIPPEGTFTSVITACVKEGNVAEALRLKDDMVNCGKSMNLAVATSLMKGYCMQGNL 279

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLS--------- 462
             AL +  ++   G  P++VTY  LID   K G ++ A + Y +M+  G+          
Sbjct: 280 RSALVLVNEISESGLVPNKVTYSVLIDGCCKNGNIEKAFEFYSEMKTKGIRSSVYSLNSI 339

Query: 463 -------------------------PDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCI 497
                                     + FT++ +++ L K G +  A  L+ E++ +G  
Sbjct: 340 LEGYLKCQSWQNAFTMFNDALESGLANVFTFNTLLSWLCKEGKMNEACNLWDEVIAKGIS 399

Query: 498 PNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAV 557
           PN+V+YN +I    +  N  +A K+Y++M + GF P+ VT++I+M+     G ++ A ++
Sbjct: 400 PNVVSYNNIILGHCRKDNINAACKVYKEMLDNGFTPNAVTFTILMDGYFKKGDIENAFSI 459

Query: 558 FAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTC---NSLLSA 614
           F  M+  N +P +   G+++    KAG   +  + +   +  G    VPTC   N+++  
Sbjct: 460 FHRMKDANILPTDTTLGIIIKGLCKAGRSFEGRDLFNKFVSQGF---VPTCMPYNTIIDG 516

Query: 615 FLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
           F++ G ++ A ++ + M  +G+ PS  TYT L+
Sbjct: 517 FIKEGNINLASNVYREMCEVGITPSTVTYTSLI 549



 Score =  117 bits (294), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 65/201 (32%), Positives = 111/201 (55%), Gaps = 1/201 (0%)

Query: 342 VALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRL 401
           +AL   N ++R+ G K D   Y T++    + R   + ++LL+++   G  PN   YN +
Sbjct: 560 LALKLLNDMKRK-GLKMDIKAYGTLIDGFCKRRDMKSAHELLNELRGAGLSPNRFIYNSM 618

Query: 402 IHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGL 461
           I  +   N + EA+D++K+M   G   D  TY +LID   K+G L  A D++ +M + G+
Sbjct: 619 ITGFKNMNNVEEAIDLYKKMVNEGIPCDLKTYTSLIDGLLKSGRLLYASDIHTEMLSKGI 678

Query: 462 SPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALK 521
            PD   ++V+IN L   G  + A ++  +M  +  IP+++ YN +IA   K  N Q A +
Sbjct: 679 LPDDRAHTVLINGLCNKGQFENARKILEDMNGKNMIPSVLIYNTLIAGHFKEGNLQEAFR 738

Query: 522 LYRDMQNAGFEPDKVTYSIVM 542
           L+ +M + G  PD +TY I++
Sbjct: 739 LHDEMLDRGLVPDNITYDILV 759



 Score = 91.3 bits (225), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 71/309 (22%), Positives = 145/309 (46%), Gaps = 3/309 (0%)

Query: 349 WLRRQA-GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGR 407
           +L+ +A G + D+  Y+  V +L      G    LL +M   G  P   T+  +I +  +
Sbjct: 181 FLQAKARGVELDQEAYSIFVHLLCLKPNSGYALSLLREMRAAGWIPPEGTFTSVITACVK 240

Query: 408 ANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFT 467
              + EAL +   M   G   +     +L+  +   G L  A+ +  ++  +GL P+  T
Sbjct: 241 EGNVAEALRLKDDMVNCGKSMNLAVATSLMKGYCMQGNLRSALVLVNEISESGLVPNKVT 300

Query: 468 YSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQ 527
           YSV+I+   K G+++ A + + EM  +G   ++ + N ++    K +++Q+A  ++ D  
Sbjct: 301 YSVLIDGCCKNGNIEKAFEFYSEMKTKGIRSSVYSLNSILEGYLKCQSWQNAFTMFNDAL 360

Query: 528 NAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVR 587
            +G   +  T++ ++  L   G ++EA  ++ E+  K   P+   Y  ++    +  N+ 
Sbjct: 361 ESGL-ANVFTFNTLLSWLCKEGKMNEACNLWDEVIAKGISPNVVSYNNIILGHCRKDNIN 419

Query: 588 KAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
            A + Y+ ML  G  PN  T   L+  + + G + +A+ +   M +  + P+  T  +++
Sbjct: 420 AACKVYKEMLDNGFTPNAVTFTILMDGYFKKGDIENAFSIFHRMKDANILPTDTTLGIII 479

Query: 648 S-CCTEARS 655
              C   RS
Sbjct: 480 KGLCKAGRS 488



 Score = 90.1 bits (222), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 92/367 (25%), Positives = 154/367 (41%), Gaps = 43/367 (11%)

Query: 298 VESVSRILRQWKWGPLAEEALGNTNYSM-----DAYQANQVLKQLQDHTVALGFFNWLRR 352
           VE+ S++  Q K   L E   G  + S+     +++  N +L +  D T AL +F  +++
Sbjct: 49  VETSSKVACQTKLVSL-ESTNGKCDTSLNSALTESHVINTLLNRKSDPTSALKYFERIKK 107

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
           +  F         ++ IL  + +                           H   RA YL 
Sbjct: 108 KIEFAKCTDAVCILLLILTNSAE--------------------------TH---RAQYLF 138

Query: 413 EALDVFKQMQVVGCEPDRVTYCTLI---DIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYS 469
           +     K ++   C  DR+  CT +    +  + G +  A   + + +A G+  D   YS
Sbjct: 139 DQFASGKSVRF-SCLMDRLVECTKLYNFPLDIQEGNILEAEQHFLQAKARGVELDQEAYS 197

Query: 470 VIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNA 529
           + ++ L    +   A  L  EM   G IP   T+  +I    K  N   AL+L  DM N 
Sbjct: 198 IFVHLLCLKPNSGYALSLLREMRAAGWIPPEGTFTSVITACVKEGNVAEALRLKDDMVNC 257

Query: 530 GFEPDKVTYSIVMEVLGHC--GYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVR 587
           G   +    + +M+  G+C  G L  A  +  E+     VP++  Y +L+D   K GN+ 
Sbjct: 258 GKSMNLAVATSLMK--GYCMQGNLRSALVLVNEISESGLVPNKVTYSVLIDGCCKNGNIE 315

Query: 588 KAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
           KA+E+Y  M   G+R +V + NS+L  +L+     +A+ +    L  GL       TLL 
Sbjct: 316 KAFEFYSEMKTKGIRSSVYSLNSILEGYLKCQSWQNAFTMFNDALESGLANVFTFNTLLS 375

Query: 648 SCCTEAR 654
             C E +
Sbjct: 376 WLCKEGK 382


>gi|414586846|tpg|DAA37417.1| TPA: hypothetical protein ZEAMMB73_755201 [Zea mays]
          Length = 612

 Score =  152 bits (383), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 86/302 (28%), Positives = 151/302 (50%), Gaps = 2/302 (0%)

Query: 346 FFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSY 405
           F   LRR  G +    T+ T++  + +A      N L   M + G  P+V TY   I   
Sbjct: 265 FDEMLRR--GVQPTVVTFNTLMSGMCKASDLNNANALRGLMAKAGIAPDVYTYGAFIQGL 322

Query: 406 GRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDT 465
            +   + +A+++F++M   G  P+ V   TLID H K G +   +++  +M   G+  D 
Sbjct: 323 CKTGRIQDAMEMFEEMCERGLNPNTVVLTTLIDAHCKEGDVTAGLELRWEMATRGVKADL 382

Query: 466 FTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRD 525
             Y+ ++N   +   ++AA+ +  EM   G  P+ VTY  +I    K     +A+++ ++
Sbjct: 383 VAYNALVNGFCRVRDMKAANDIVEEMRKDGLKPDKVTYTTLIDGCCKEGELDTAMEMKQE 442

Query: 526 MQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGN 585
           M + G   D VTY+ ++  L   G   +AE +  EM      PD   Y +++D + K G+
Sbjct: 443 MSDEGVALDDVTYTALISGLSKAGRSVDAERILCEMMEAGLQPDNTTYTMVIDAFCKNGD 502

Query: 586 VRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTL 645
           V+  ++  + M   G  P + T N +++ F  +GQ+ +A  LL  MLN+G+ P+  TY +
Sbjct: 503 VKTGFKHLKEMQNKGKNPGIVTYNVVMNGFCSLGQMKNADMLLNAMLNIGVCPNDITYNI 562

Query: 646 LL 647
           LL
Sbjct: 563 LL 564



 Score =  132 bits (331), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 77/242 (31%), Positives = 128/242 (52%), Gaps = 4/242 (1%)

Query: 385 QMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAG 444
           +M   G + ++V YN L++ + R   +  A D+ ++M+  G +PD+VTY TLID   K G
Sbjct: 372 EMATRGVKADLVAYNALVNGFCRVRDMKAANDIVEEMRKDGLKPDKVTYTTLIDGCCKEG 431

Query: 445 FLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYN 504
            LD AM+M ++M   G++ D  TY+ +I+ L KAG    A ++ CEM+  G  P+  TY 
Sbjct: 432 ELDTAMEMKQEMSDEGVALDDVTYTALISGLSKAGRSVDAERILCEMMEAGLQPDNTTYT 491

Query: 505 IMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRK 564
           ++I    K  + ++  K  ++MQN G  P  VTY++VM      G +  A+ +   M   
Sbjct: 492 MVIDAFCKNGDVKTGFKHLKEMQNKGKNPGIVTYNVVMNGFCSLGQMKNADMLLNAMLNI 551

Query: 565 NWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDA 624
              P++  Y +L+D   K G VR   E   A    G+  +     SL++ F++  + + +
Sbjct: 552 GVCPNDITYNILLDGHCKHGKVRDTEELKSA---KGMVSDFGVYTSLINEFVK-KKSAKS 607

Query: 625 YH 626
           YH
Sbjct: 608 YH 609



 Score =  110 bits (274), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 74/238 (31%), Positives = 119/238 (50%), Gaps = 7/238 (2%)

Query: 347 FNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYG 406
             W     G K D   Y  +V    R R   A N ++++M +DG +P+ VTY  LI    
Sbjct: 369 LRWEMATRGVKADLVAYNALVNGFCRVRDMKAANDIVEEMRKDGLKPDKVTYTTLIDGCC 428

Query: 407 RANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTF 466
           +   L+ A+++ ++M   G   D VTY  LI   +KAG    A  +  +M  AGL PD  
Sbjct: 429 KEGELDTAMEMKQEMSDEGVALDDVTYTALISGLSKAGRSVDAERILCEMMEAGLQPDNT 488

Query: 467 TYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDM 526
           TY+++I+   K G ++   +   EM N+G  P +VTYN+++         ++A  L   M
Sbjct: 489 TYTMVIDAFCKNGDVKTGFKHLKEMQNKGKNPGIVTYNVVMNGFCSLGQMKNADMLLNAM 548

Query: 527 QNAGFEPDKVTYSIVMEVLGHC--GYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGK 582
            N G  P+ +TY+I+++  GHC  G + + E + +    K  V D  VY  L++ + K
Sbjct: 549 LNIGVCPNDITYNILLD--GHCKHGKVRDTEELKSA---KGMVSDFGVYTSLINEFVK 601



 Score =  100 bits (249), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 62/214 (28%), Positives = 106/214 (49%), Gaps = 1/214 (0%)

Query: 453 YKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAK 512
           Y  +  AG+ P+   +++++  + ++G L +A  +F EM+ +G  P +VT+N +++   K
Sbjct: 230 YLHLLDAGVPPEARQFNMLMRDMIRSGKLASARNVFDEMLRRGVQPTVVTFNTLMSGMCK 289

Query: 513 ARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPV 572
           A +  +A  L   M  AG  PD  TY   ++ L   G + +A  +F EM  +   P+  V
Sbjct: 290 ASDLNNANALRGLMAKAGIAPDVYTYGAFIQGLCKTGRIQDAMEMFEEMCERGLNPNTVV 349

Query: 573 YGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGML 632
              L+D   K G+V    E    M   G++ ++   N+L++ F RV  +  A  +++ M 
Sbjct: 350 LTTLIDAHCKEGDVTAGLELRWEMATRGVKADLVAYNALVNGFCRVRDMKAANDIVEEMR 409

Query: 633 NLGLKPSLQTYTLLLS-CCTEARSPYDMGFCHEL 665
             GLKP   TYT L+  CC E      M    E+
Sbjct: 410 KDGLKPDKVTYTTLIDGCCKEGELDTAMEMKQEM 443



 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 72/269 (26%), Positives = 116/269 (43%), Gaps = 35/269 (13%)

Query: 390 GCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVA 449
           G  P    +N L+    R+  L  A +VF +M   G +P  VT+ TL+    KA  L+ A
Sbjct: 237 GVPPEARQFNMLMRDMIRSGKLASARNVFDEMLRRGVQPTVVTFNTLMSGMCKASDLNNA 296

Query: 450 MDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIAL 509
             +   M  AG++PD +TY   I  L K G +Q A ++F EM  +G  PN V    +I  
Sbjct: 297 NALRGLMAKAGIAPDVYTYGAFIQGLCKTGRIQDAMEMFEEMCERGLNPNTVVLTTLIDA 356

Query: 510 QAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPD 569
             K  +  + L+L  +M   G + D V Y+                              
Sbjct: 357 HCKEGDVTAGLELRWEMATRGVKADLVAYNA----------------------------- 387

Query: 570 EPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQ 629
                 LV+ + +  +++ A +  E M + GL+P+  T  +L+    + G+L  A  + Q
Sbjct: 388 ------LVNGFCRVRDMKAANDIVEEMRKDGLKPDKVTYTTLIDGCCKEGELDTAMEMKQ 441

Query: 630 GMLNLGLKPSLQTYTLLLSCCTEARSPYD 658
            M + G+     TYT L+S  ++A    D
Sbjct: 442 EMSDEGVALDDVTYTALISGLSKAGRSVD 470



 Score = 47.8 bits (112), Expect = 0.029,   Method: Compositional matrix adjust.
 Identities = 38/133 (28%), Positives = 64/133 (48%), Gaps = 5/133 (3%)

Query: 539 SIVMEVLGHCGYL-DEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAML 597
           S V +V    G L D    +   +RR   VP  P +    DL  +  +V +A+ +Y  +L
Sbjct: 179 SAVAKVYADEGLLPDGCSLLLLALRRGIRVP-MPAWS---DLMNRLPSVPEAYAFYLHLL 234

Query: 598 QAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPY 657
            AG+ P     N L+   +R G+L+ A ++   ML  G++P++ T+  L+S   +A    
Sbjct: 235 DAGVPPEARQFNMLMRDMIRSGKLASARNVFDEMLRRGVQPTVVTFNTLMSGMCKASDLN 294

Query: 658 DMGFCHELMAVSG 670
           +      LMA +G
Sbjct: 295 NANALRGLMAKAG 307



 Score = 41.2 bits (95), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 30/129 (23%), Positives = 57/129 (44%), Gaps = 1/129 (0%)

Query: 553 EAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLL 612
           EA A +  +      P+   + +L+    ++G +  A   ++ ML+ G++P V T N+L+
Sbjct: 225 EAYAFYLHLLDAGVPPEARQFNMLMRDMIRSGKLASARNVFDEMLRRGVQPTVVTFNTLM 284

Query: 613 SAFLRVGQLSDAYHLLQGMLNLGLKPSLQTY-TLLLSCCTEARSPYDMGFCHELMAVSGH 671
           S   +   L++A  L   M   G+ P + TY   +   C   R    M    E+     +
Sbjct: 285 SGMCKASDLNNANALRGLMAKAGIAPDVYTYGAFIQGLCKTGRIQDAMEMFEEMCERGLN 344

Query: 672 PAHMFLLSM 680
           P  + L ++
Sbjct: 345 PNTVVLTTL 353


>gi|359476104|ref|XP_003631789.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
           mitochondrial-like [Vitis vinifera]
          Length = 877

 Score =  152 bits (383), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 106/350 (30%), Positives = 162/350 (46%), Gaps = 28/350 (8%)

Query: 298 VESVSRILRQWKWGPLAEEALGNTNYSMDAYQANQVLKQLQDHTVALGFFNWLRRQAGFK 357
           V +V+ +LR +   PL EEA                  +L D  V  G  N         
Sbjct: 435 VFNVNSLLRGYLKAPLWEEA-----------------SKLFDEAVDCGVANIF------- 470

Query: 358 HDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDV 417
               TY  M+  L +  +      LLD MV  G  PNVV+YN +I  + R   ++ A  V
Sbjct: 471 ----TYNIMMSWLCKGGKMDEACSLLDNMVNQGMVPNVVSYNDMILGHCRKGNMDMASSV 526

Query: 418 FKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGK 477
           F  M     +P+ VTY  LID + K G  + A+D++ +M +  ++P  FT++ IIN L K
Sbjct: 527 FSDMLARDLKPNVVTYSILIDGNFKKGDSEKALDLFDQMLSLNIAPTDFTFNTIINGLCK 586

Query: 478 AGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVT 537
            G +  A       + +G IP+ +TYN ++    K  N  SAL +YR+M   G  P+ VT
Sbjct: 587 VGQMSEARDKLKNFLEEGFIPSCMTYNSIVDGFIKEGNIDSALAVYREMCEFGVSPNVVT 646

Query: 538 YSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAML 597
           Y+ ++        +D A     EMR K    D   Y  L+D + K  ++  A + +  +L
Sbjct: 647 YTSLINGFCKSNRIDLALKTRDEMREKGLELDVTAYSALIDGFCKRRDMESAQDLFFELL 706

Query: 598 QAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
           + GL PN    NS++S F  +  +  A    + M+N  +   L TYT L+
Sbjct: 707 EVGLSPNRIVYNSMISGFRDLNNMEAALVWYKKMINDRIPCDLGTYTTLI 756



 Score =  142 bits (358), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 85/289 (29%), Positives = 148/289 (51%)

Query: 360 EHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFK 419
           + T+ T++  L +  Q       L   + +G  P+ +TYN ++  + +   ++ AL V++
Sbjct: 574 DFTFNTIINGLCKVGQMSEARDKLKNFLEEGFIPSCMTYNSIVDGFIKEGNIDSALAVYR 633

Query: 420 QMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAG 479
           +M   G  P+ VTY +LI+   K+  +D+A+    +M+  GL  D   YS +I+   K  
Sbjct: 634 EMCEFGVSPNVVTYTSLINGFCKSNRIDLALKTRDEMREKGLELDVTAYSALIDGFCKRR 693

Query: 480 HLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYS 539
            +++A  LF E++  G  PN + YN MI+      N ++AL  Y+ M N     D  TY+
Sbjct: 694 DMESAQDLFFELLEVGLSPNRIVYNSMISGFRDLNNMEAALVWYKKMINDRIPCDLGTYT 753

Query: 540 IVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQA 599
            +++ L   G L  A  ++ EM  K  VPD   + +LV+     G +  A +  E M + 
Sbjct: 754 TLIDGLLKEGRLVFASDLYMEMLSKGIVPDIITFHVLVNGLCNKGQLENARKILEEMDRK 813

Query: 600 GLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
            + P+V   N+L++ + R G L +A+ L   ML+ GL P   TY +L++
Sbjct: 814 NMTPSVLIYNTLIAGYFREGNLKEAFTLHDEMLDRGLVPDDVTYDILIN 862



 Score =  100 bits (250), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 94/383 (24%), Positives = 158/383 (41%), Gaps = 62/383 (16%)

Query: 322 NYSMDAYQANQVLKQLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQ-FGAIN 380
           N+ +DA     +L  + D   AL +F     Q GF      Y  ++ IL R+ +  G   
Sbjct: 101 NHVIDA-----LLCHVNDPQSALRYFKRAETQRGFIRGVDAYCVLLHILMRSPETHGHAR 155

Query: 381 KLLDQMVRDGCQPNVVTY--------------------NRLIHSYGRANYLNEALDVFKQ 420
           KLL++ V     P+ V +                    N L+++Y RAN +  A+D F  
Sbjct: 156 KLLNRYVSGDSDPSPVVFVDHLINCAKRFDFELDHRVFNYLLNAYIRANRIENAIDCFNA 215

Query: 421 MQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGH 480
           M      P       L+    +   +    D+Y KM   G+  D FT  V++    K G 
Sbjct: 216 MICQDVIPWVPYMNILLTALVRRNMIGELRDLYNKMVLRGIYGDHFTVHVMVRACLKEGR 275

Query: 481 LQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSI 540
           ++ A + F E   +G   +   Y+I+I    K  N    L+L  +M+  G+ P + T++ 
Sbjct: 276 VEEAEEYFRETKERGVKLDAGAYSIIIQAVCKKPNSNLGLELLEEMKERGWVPSEATFTS 335

Query: 541 VM----------EVL-----------------------GHC--GYLDEAEAVFAEMRRKN 565
           V+          E L                       G+C  G LD A  +F ++    
Sbjct: 336 VIVACVAQGNMVEALRLKEEMINCGKPMNLVVATSLMKGYCAQGNLDSALNLFNKITEDG 395

Query: 566 WVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAY 625
             P++  Y +L++    +GN+ KA E Y  M   G+ P+V   NSLL  +L+     +A 
Sbjct: 396 LFPNKVTYSVLIEGCCNSGNIEKASELYTQMKLNGIPPSVFNVNSLLRGYLKAPLWEEAS 455

Query: 626 HLLQGMLNLGLKPSLQTYTLLLS 648
            L    ++ G+  ++ TY +++S
Sbjct: 456 KLFDEAVDCGVA-NIFTYNIMMS 477



 Score = 57.4 bits (137), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 35/116 (30%), Positives = 59/116 (50%), Gaps = 2/116 (1%)

Query: 359 DEHTYTTMV-GILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDV 417
           D  TYTT++ G+L   R   A + L  +M+  G  P+++T++ L++       L  A  +
Sbjct: 748 DLGTYTTLIDGLLKEGRLVFA-SDLYMEMLSKGIVPDIITFHVLVNGLCNKGQLENARKI 806

Query: 418 FKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIIN 473
            ++M      P  + Y TLI  + + G L  A  ++ +M   GL PD  TY ++IN
Sbjct: 807 LEEMDRKNMTPSVLIYNTLIAGYFREGNLKEAFTLHDEMLDRGLVPDDVTYDILIN 862



 Score = 48.5 bits (114), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 30/84 (35%), Positives = 40/84 (47%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           G   D  T+  +V  L    Q     K+L++M R    P+V+ YN LI  Y R   L EA
Sbjct: 779 GIVPDIITFHVLVNGLCNKGQLENARKILEEMDRKNMTPSVLIYNTLIAGYFREGNLKEA 838

Query: 415 LDVFKQMQVVGCEPDRVTYCTLID 438
             +  +M   G  PD VTY  LI+
Sbjct: 839 FTLHDEMLDRGLVPDDVTYDILIN 862


>gi|119638441|gb|ABL85032.1| auxin efflux carrier [Brachypodium sylvaticum]
          Length = 895

 Score =  152 bits (383), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 119/450 (26%), Positives = 201/450 (44%), Gaps = 40/450 (8%)

Query: 354 AGFKHDEHTYTTMV-GILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
           +G K +   Y T+V G +   +   A + +L +M+  G QPN + Y+ LI    +   L 
Sbjct: 342 SGLKPNIVVYGTLVDGFMKEGKTAEAFD-ILKEMISAGVQPNKIMYDNLIRGLCKIGQLG 400

Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
            A  + K+M  VG  PD  TY  L+  H +    D A ++  +M+ +G+ P+ ++Y ++I
Sbjct: 401 RASKLLKEMIKVGLRPDTFTYNPLMQGHFQQHDKDGAFELLNEMRNSGILPNVYSYGIMI 460

Query: 473 NCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFE 532
           N L + G  + A  L  EM+++G  PN   Y  +I   +K  N   A +    M  A   
Sbjct: 461 NGLCQNGESKEAGNLLEEMISEGLKPNAFMYAPLIIGHSKEGNISLACEALEKMTKANVH 520

Query: 533 PDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEW 592
           PD   Y+ +++ L   G ++EAE  +A+++++  VPDE  Y  L+  + K GN+ KA + 
Sbjct: 521 PDLFCYNSLIKGLSTVGRMEEAEEYYAQVQKRGLVPDEFTYSGLIHGYCKTGNLEKADQL 580

Query: 593 YEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTE 652
              ML +GL+PN  T   LL  + +         +LQ ML  G KP    Y +++   + 
Sbjct: 581 LRQMLNSGLKPNADTYTDLLEGYFKSNDYEKVSSILQSMLGSGDKPDNHIYGIVIRNLSR 640

Query: 653 ARSPYDMGFCHELMAVSGHPAHMFLLSMPSPG--PDGQNVRDHVGSFLEMMHSE------ 704
           +          E M V    A M L  +   G  PD       +    ++   E      
Sbjct: 641 S----------ENMEV----AFMVLTEVEKNGLVPDLHIYSSLISGLCKIADMEKAVGLL 686

Query: 705 DRESKRGL------VDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAVKEKGMSYWLINL 758
           D  +K GL       +A++D   +SG         +++  +NV+ D++  KG+    +  
Sbjct: 687 DEMAKEGLEPGIVCYNALIDGFCRSG---------DISRARNVF-DSILAKGLVPNCVTY 736

Query: 759 HVMSDGTAVIALSRTLAWFRKQMLISGVGP 788
             + DG              K+ML  G+ P
Sbjct: 737 TALIDGNCKNGDITDAFDLYKEMLDRGIAP 766



 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 103/375 (27%), Positives = 180/375 (48%), Gaps = 9/375 (2%)

Query: 276 REMKIPAGLAPFSRHFASTGNVVESVSRILRQWKWGPLAEEALGNTNYSMDAYQANQVLK 335
           +EM I AG+ P    +    N++  + +I +  +   L +E +       D +  N +++
Sbjct: 372 KEM-ISAGVQPNKIMY---DNLIRGLCKIGQLGRASKLLKEMI-KVGLRPDTFTYNPLMQ 426

Query: 336 ---QLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQ 392
              Q  D   A    N +R  +G   + ++Y  M+  L +  +      LL++M+ +G +
Sbjct: 427 GHFQQHDKDGAFELLNEMR-NSGILPNVYSYGIMINGLCQNGESKEAGNLLEEMISEGLK 485

Query: 393 PNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDM 452
           PN   Y  LI  + +   ++ A +  ++M      PD   Y +LI   +  G ++ A + 
Sbjct: 486 PNAFMYAPLIIGHSKEGNISLACEALEKMTKANVHPDLFCYNSLIKGLSTVGRMEEAEEY 545

Query: 453 YKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAK 512
           Y ++Q  GL PD FTYS +I+   K G+L+ A QL  +M+N G  PN  TY  ++    K
Sbjct: 546 YAQVQKRGLVPDEFTYSGLIHGYCKTGNLEKADQLLRQMLNSGLKPNADTYTDLLEGYFK 605

Query: 513 ARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPV 572
           + +Y+    + + M  +G +PD   Y IV+  L     ++ A  V  E+ +   VPD  +
Sbjct: 606 SNDYEKVSSILQSMLGSGDKPDNHIYGIVIRNLSRSENMEVAFMVLTEVEKNGLVPDLHI 665

Query: 573 YGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGML 632
           Y  L+    K  ++ KA    + M + GL P +   N+L+  F R G +S A ++   +L
Sbjct: 666 YSSLISGLCKIADMEKAVGLLDEMAKEGLEPGIVCYNALIDGFCRSGDISRARNVFDSIL 725

Query: 633 NLGLKPSLQTYTLLL 647
             GL P+  TYT L+
Sbjct: 726 AKGLVPNCVTYTALI 740



 Score =  135 bits (341), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 99/345 (28%), Positives = 153/345 (44%), Gaps = 36/345 (10%)

Query: 338 QDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVT 397
           +D   A   F  +RR+     +E TY  M+  L R+          ++MV  G  P+  T
Sbjct: 257 RDFDAAKKVFEEMRRR-DCAMNEVTYNVMISGLCRSGAVEEAFGFKEEMVDYGLSPDAFT 315

Query: 398 YNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQ 457
           Y  L++   + + L EA  +  +M   G +P+ V Y TL+D   K G    A D+ K+M 
Sbjct: 316 YGALMNGLCKGSRLKEAKALLDEMSCSGLKPNIVVYGTLVDGFMKEGKTAEAFDILKEMI 375

Query: 458 AAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQ 517
           +AG+ P+   Y  +I  L K G L  A +L  EM+  G  P+  TYN ++    +  +  
Sbjct: 376 SAGVQPNKIMYDNLIRGLCKIGQLGRASKLLKEMIKVGLRPDTFTYNPLMQGHFQQHDKD 435

Query: 518 SALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLV 577
            A +L  +M+N+G  P+  +Y I++  L   G   EA  +  EM  +   P+  +Y  L+
Sbjct: 436 GAFELLNEMRNSGILPNVYSYGIMINGLCQNGESKEAGNLLEEMISEGLKPNAFMYAPLI 495

Query: 578 DLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLS------------------------ 613
               K GN+  A E  E M +A + P++   NSL+                         
Sbjct: 496 IGHSKEGNISLACEALEKMTKANVHPDLFCYNSLIKGLSTVGRMEEAEEYYAQVQKRGLV 555

Query: 614 -----------AFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
                       + + G L  A  LL+ MLN GLKP+  TYT LL
Sbjct: 556 PDEFTYSGLIHGYCKTGNLEKADQLLRQMLNSGLKPNADTYTDLL 600



 Score =  132 bits (333), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 100/355 (28%), Positives = 161/355 (45%), Gaps = 6/355 (1%)

Query: 393 PNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDM 452
           P+    + L+ +Y +   +  A  V   M  +G  P R     L+    +A  +++   +
Sbjct: 171 PSTAVLDVLVDTYKKTGSVRNAAQVVLMMADLGLAPTRRCCNGLLKDLLRADAMELLWKL 230

Query: 453 YKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAK 512
              M+ AG+ PD +TYS  I    KA    AA ++F EM  + C  N VTYN+MI+   +
Sbjct: 231 KGFMEGAGILPDVYTYSTFIEAHCKARDFDAAKKVFEEMRRRDCAMNEVTYNVMISGLCR 290

Query: 513 ARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPV 572
           +   + A     +M + G  PD  TY  +M  L     L EA+A+  EM      P+  V
Sbjct: 291 SGAVEEAFGFKEEMVDYGLSPDAFTYGALMNGLCKGSRLKEAKALLDEMSCSGLKPNIVV 350

Query: 573 YGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGML 632
           YG LVD + K G   +A++  + M+ AG++PN    ++L+    ++GQL  A  LL+ M+
Sbjct: 351 YGTLVDGFMKEGKTAEAFDILKEMISAGVQPNKIMYDNLIRGLCKIGQLGRASKLLKEMI 410

Query: 633 NLGLKPSLQTYTLLLSCCTEARSPYDMGFCHEL---MAVSGHPAHMFLLSMPSPGPDGQN 689
            +GL+P   TY  L+    +    +D     EL   M  SG   +++   +   G     
Sbjct: 411 KVGLRPDTFTYNPLMQGHFQQ---HDKDGAFELLNEMRNSGILPNVYSYGIMINGLCQNG 467

Query: 690 VRDHVGSFLEMMHSEDRESKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPD 744
                G+ LE M SE  +    +   ++    K G    A    E   + NV+PD
Sbjct: 468 ESKEAGNLLEEMISEGLKPNAFMYAPLIIGHSKEGNISLACEALEKMTKANVHPD 522



 Score =  128 bits (321), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 97/388 (25%), Positives = 180/388 (46%), Gaps = 7/388 (1%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAIN---KLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           G K +   Y  +  I+G +++ G I+   + L++M +    P++  YN LI        +
Sbjct: 483 GLKPNAFMYAPL--IIGHSKE-GNISLACEALEKMTKANVHPDLFCYNSLIKGLSTVGRM 539

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
            EA + + Q+Q  G  PD  TY  LI  + K G L+ A  + ++M  +GL P+  TY+ +
Sbjct: 540 EEAEEYYAQVQKRGLVPDEFTYSGLIHGYCKTGNLEKADQLLRQMLNSGLKPNADTYTDL 599

Query: 472 INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF 531
           +    K+   +    +   M+  G  P+   Y I+I   +++ N + A  +  +++  G 
Sbjct: 600 LEGYFKSNDYEKVSSILQSMLGSGDKPDNHIYGIVIRNLSRSENMEVAFMVLTEVEKNGL 659

Query: 532 EPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWE 591
            PD   YS ++  L     +++A  +  EM ++   P    Y  L+D + ++G++ +A  
Sbjct: 660 VPDLHIYSSLISGLCKIADMEKAVGLLDEMAKEGLEPGIVCYNALIDGFCRSGDISRARN 719

Query: 592 WYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCT 651
            ++++L  GL PN  T  +L+    + G ++DA+ L + ML+ G+ P    Y +L + C+
Sbjct: 720 VFDSILAKGLVPNCVTYTALIDGNCKNGDITDAFDLYKEMLDRGIAPDAFVYNVLATGCS 779

Query: 652 EARSPYDMGFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRESKRG 711
           +A       F  E M   G+ A++ L +    G   +         L +M   +      
Sbjct: 780 DAADLEQALFLTEEMFNRGY-ANVSLFNTLVHGFCKRGKLQETEKLLHVMMDREIVPNAQ 838

Query: 712 LVDAVVDFLHKSGLKEEAGSVWEVAAQK 739
            V+ VV    K+G   EA  V+    QK
Sbjct: 839 TVEKVVSEFGKAGKLGEAHRVFAELQQK 866



 Score =  124 bits (312), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 82/278 (29%), Positives = 136/278 (48%)

Query: 370 LGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPD 429
           L RA     + KL   M   G  P+V TY+  I ++ +A   + A  VF++M+   C  +
Sbjct: 218 LLRADAMELLWKLKGFMEGAGILPDVYTYSTFIEAHCKARDFDAAKKVFEEMRRRDCAMN 277

Query: 430 RVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFC 489
            VTY  +I    ++G ++ A    ++M   GLSPD FTY  ++N L K   L+ A  L  
Sbjct: 278 EVTYNVMISGLCRSGAVEEAFGFKEEMVDYGLSPDAFTYGALMNGLCKGSRLKEAKALLD 337

Query: 490 EMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCG 549
           EM   G  PN+V Y  ++    K      A  + ++M +AG +P+K+ Y  ++  L   G
Sbjct: 338 EMSCSGLKPNIVVYGTLVDGFMKEGKTAEAFDILKEMISAGVQPNKIMYDNLIRGLCKIG 397

Query: 550 YLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCN 609
            L  A  +  EM +    PD   Y  L+    +  +   A+E    M  +G+ PNV +  
Sbjct: 398 QLGRASKLLKEMIKVGLRPDTFTYNPLMQGHFQQHDKDGAFELLNEMRNSGILPNVYSYG 457

Query: 610 SLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
            +++   + G+  +A +LL+ M++ GLKP+   Y  L+
Sbjct: 458 IMINGLCQNGESKEAGNLLEEMISEGLKPNAFMYAPLI 495



 Score =  117 bits (293), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 80/299 (26%), Positives = 146/299 (48%), Gaps = 5/299 (1%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           ++ G   DE TY+ ++    +       ++LL QM+  G +PN  TY  L+  Y ++N  
Sbjct: 550 QKRGLVPDEFTYSGLIHGYCKTGNLEKADQLLRQMLNSGLKPNADTYTDLLEGYFKSNDY 609

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
            +   + + M   G +PD   Y  +I   +++  ++VA  +  +++  GL PD   YS +
Sbjct: 610 EKVSSILQSMLGSGDKPDNHIYGIVIRNLSRSENMEVAFMVLTEVEKNGLVPDLHIYSSL 669

Query: 472 INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF 531
           I+ L K   ++ A  L  EM  +G  P +V YN +I    ++ +   A  ++  +   G 
Sbjct: 670 ISGLCKIADMEKAVGLLDEMAKEGLEPGIVCYNALIDGFCRSGDISRARNVFDSILAKGL 729

Query: 532 EPDKVTYSIVMEVLGHC--GYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKA 589
            P+ VTY+ +++  G+C  G + +A  ++ EM  +   PD  VY +L      A ++ +A
Sbjct: 730 VPNCVTYTALID--GNCKNGDITDAFDLYKEMLDRGIAPDAFVYNVLATGCSDAADLEQA 787

Query: 590 WEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
               E M   G   NV   N+L+  F + G+L +   LL  M++  + P+ QT   ++S
Sbjct: 788 LFLTEEMFNRGY-ANVSLFNTLVHGFCKRGKLQETEKLLHVMMDREIVPNAQTVEKVVS 845



 Score =  115 bits (287), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 72/283 (25%), Positives = 131/283 (46%)

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
           +A    D   Y +++  L    +     +   Q+ + G  P+  TY+ LIH Y +   L 
Sbjct: 516 KANVHPDLFCYNSLIKGLSTVGRMEEAEEYYAQVQKRGLVPDEFTYSGLIHGYCKTGNLE 575

Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
           +A  + +QM   G +P+  TY  L++ + K+   +    + + M  +G  PD   Y ++I
Sbjct: 576 KADQLLRQMLNSGLKPNADTYTDLLEGYFKSNDYEKVSSILQSMLGSGDKPDNHIYGIVI 635

Query: 473 NCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFE 532
             L ++ +++ A  +  E+   G +P+L  Y+ +I+   K  + + A+ L  +M   G E
Sbjct: 636 RNLSRSENMEVAFMVLTEVEKNGLVPDLHIYSSLISGLCKIADMEKAVGLLDEMAKEGLE 695

Query: 533 PDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEW 592
           P  V Y+ +++     G +  A  VF  +  K  VP+   Y  L+D   K G++  A++ 
Sbjct: 696 PGIVCYNALIDGFCRSGDISRARNVFDSILAKGLVPNCVTYTALIDGNCKNGDITDAFDL 755

Query: 593 YEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLG 635
           Y+ ML  G+ P+    N L +       L  A  L + M N G
Sbjct: 756 YKEMLDRGIAPDAFVYNVLATGCSDAADLEQALFLTEEMFNRG 798



 Score =  111 bits (278), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 97/431 (22%), Positives = 183/431 (42%), Gaps = 13/431 (3%)

Query: 386 MVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGF 445
           M   G  P     N L+    RA+ +     +   M+  G  PD  TY T I+ H KA  
Sbjct: 199 MADLGLAPTRRCCNGLLKDLLRADAMELLWKLKGFMEGAGILPDVYTYSTFIEAHCKARD 258

Query: 446 LDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNI 505
            D A  ++++M+    + +  TY+V+I+ L ++G ++ A     EMV+ G  P+  TY  
Sbjct: 259 FDAAKKVFEEMRRRDCAMNEVTYNVMISGLCRSGAVEEAFGFKEEMVDYGLSPDAFTYGA 318

Query: 506 MIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKN 565
           ++    K    + A  L  +M  +G +P+ V Y  +++     G   EA  +  EM    
Sbjct: 319 LMNGLCKGSRLKEAKALLDEMSCSGLKPNIVVYGTLVDGFMKEGKTAEAFDILKEMISAG 378

Query: 566 WVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAY 625
             P++ +Y  L+    K G + +A +  + M++ GLRP+  T N L+    +      A+
Sbjct: 379 VQPNKIMYDNLIRGLCKIGQLGRASKLLKEMIKVGLRPDTFTYNPLMQGHFQQHDKDGAF 438

Query: 626 HLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGFCHELMAVSGHPAHMFLLSMPSPGP 685
            LL  M N G+ P++ +Y ++++   +     + G   E M   G   + F+ +    G 
Sbjct: 439 ELLNEMRNSGILPNVYSYGIMINGLCQNGESKEAGNLLEEMISEGLKPNAFMYAPLIIGH 498

Query: 686 DGQNVRDHVGSFLEMMHSEDRESKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDA 745
             +         LE M   +        ++++  L   G  EEA   +    ++ + PD 
Sbjct: 499 SKEGNISLACEALEKMTKANVHPDLFCYNSLIKGLSTVGRMEEAEEYYAQVQKRGLVPDE 558

Query: 746 VKEKGMSYWLINLHVMSDGTAVIALSRTLAWFRKQMLISGVGP---SRIDIVTGWGRRSR 802
               G+ +       +     ++          +QML SG+ P   +  D++ G+ + + 
Sbjct: 559 FTYSGLIHGYCKTGNLEKADQLL----------RQMLNSGLKPNADTYTDLLEGYFKSND 608

Query: 803 VTGTSLVRQAV 813
               S + Q++
Sbjct: 609 YEKVSSILQSM 619



 Score = 87.0 bits (214), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 61/214 (28%), Positives = 102/214 (47%), Gaps = 5/214 (2%)

Query: 462 SPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALK 521
           SP T    V+++   K G ++ A Q+   M + G  P     N ++    +A   +   K
Sbjct: 170 SPSTAVLDVLVDTYKKTGSVRNAAQVVLMMADLGLAPTRRCCNGLLKDLLRADAMELLWK 229

Query: 522 LYRDMQNAGFEPDKVTYSIVMEVLGHCGY--LDEAEAVFAEMRRKNWVPDEPVYGLLVDL 579
           L   M+ AG  PD  TYS  +E   HC     D A+ VF EMRR++   +E  Y +++  
Sbjct: 230 LKGFMEGAGILPDVYTYSTFIE--AHCKARDFDAAKKVFEEMRRRDCAMNEVTYNVMISG 287

Query: 580 WGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPS 639
             ++G V +A+ + E M+  GL P+  T  +L++   +  +L +A  LL  M   GLKP+
Sbjct: 288 LCRSGAVEEAFGFKEEMVDYGLSPDAFTYGALMNGLCKGSRLKEAKALLDEMSCSGLKPN 347

Query: 640 LQTY-TLLLSCCTEARSPYDMGFCHELMAVSGHP 672
           +  Y TL+     E ++        E+++    P
Sbjct: 348 IVVYGTLVDGFMKEGKTAEAFDILKEMISAGVQP 381



 Score = 47.8 bits (112), Expect = 0.026,   Method: Compositional matrix adjust.
 Identities = 29/93 (31%), Positives = 42/93 (45%)

Query: 562 RRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQL 621
           R ++  P   V  +LVD + K G+VR A +    M   GL P    CN LL   LR   +
Sbjct: 165 RSRSPSPSTAVLDVLVDTYKKTGSVRNAAQVVLMMADLGLAPTRRCCNGLLKDLLRADAM 224

Query: 622 SDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEAR 654
              + L   M   G+ P + TY+  +    +AR
Sbjct: 225 ELLWKLKGFMEGAGILPDVYTYSTFIEAHCKAR 257


>gi|414591656|tpg|DAA42227.1| TPA: PPR-814a [Zea mays]
          Length = 816

 Score =  152 bits (383), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 89/295 (30%), Positives = 149/295 (50%)

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
           Q G   D  TY+++V  L +AR        L QMV  G  P+  TYN LI+ Y       
Sbjct: 249 QRGIPPDLVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPDNWTYNNLIYGYSSTGQWK 308

Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
           EA+ VFK+M+     PD V   TL+    K G +  A D++  M   G +PD F+Y++++
Sbjct: 309 EAVRVFKEMRRQSILPDVVALNTLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYTIML 368

Query: 473 NCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFE 532
           N     G L     LF  M+  G  P++ T+N++I   A       A+ ++ +M++ G +
Sbjct: 369 NGYATKGCLVDMTDLFDLMLGDGIAPDIYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVK 428

Query: 533 PDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEW 592
           P  VTY  V+  L   G +D+A   F +M  +  VPD+  Y  L+  +   G++ KA E 
Sbjct: 429 PHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQGVVPDKYAYHCLIQGFCTHGSLLKAKEL 488

Query: 593 YEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
              ++  G+R ++    S+++   ++G++ DA ++    +N+GL P    Y +L+
Sbjct: 489 ISEIMNNGMRLDIVFFGSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLM 543



 Score =  149 bits (376), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 130/492 (26%), Positives = 231/492 (46%), Gaps = 40/492 (8%)

Query: 342 VALGFFNWLRRQAGFKHDEHTYTTMV-GILGRARQFGAINKLLDQMVRDGCQPNVVTYNR 400
           +AL FF  L R  G + D    + ++ G     R   A++ LL +    GC P+V +YN 
Sbjct: 131 LALAFFGQLLR-TGLRVDAIIASHLLKGFCEAKRTDEALDILLHRTPELGCVPDVFSYNI 189

Query: 401 LIHSYGRANYLNEALDVFKQMQVVG--CEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQA 458
           L+ S        +A D+ + M   G  C PD V Y T+ID   K G ++ A D++K+M  
Sbjct: 190 LLKSLCNQGKSGQADDLLRMMAEGGTVCSPDVVAYNTVIDGFFKEGDVNKACDLFKEMVQ 249

Query: 459 AGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQS 518
            G+ PD  TYS +++ L KA  +  A     +MVN+G +P+  TYN +I   +    ++ 
Sbjct: 250 RGIPPDLVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPDNWTYNNLIYGYSSTGQWKE 309

Query: 519 ALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVD 578
           A++++++M+     PD V  + +M  L   G + EA  VF  M  K   PD   Y ++++
Sbjct: 310 AVRVFKEMRRQSILPDVVALNTLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYTIMLN 369

Query: 579 LWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKP 638
            +   G +    + ++ ML  G+ P++ T N L+ A+   G L  A  +   M + G+KP
Sbjct: 370 GYATKGCLVDMTDLFDLMLGDGIAPDIYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKP 429

Query: 639 SLQTY-TLLLSCCTEARSPYDMGFCHELM---AVSGHPAHMFLLSMPSPGPDGQNVRDHV 694
            + TY T++ + C   +    M   ++++    V    A+  L+         Q    H 
Sbjct: 430 HVVTYMTVIAALCRIGKMDDAMEKFNQMIDQGVVPDKYAYHCLI---------QGFCTH- 479

Query: 695 GSFLEMMHSEDRESKRGLVDAVVDF------LHKSGLKEEAGSVWEVAAQKNVYPDAVKE 748
           GS L+           G+   +V F      L K G   +A +++++     ++PDAV  
Sbjct: 480 GSLLKAKELISEIMNNGMRLDIVFFGSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVV- 538

Query: 749 KGMSYWLINLHVMSDGTAVIA-LSRTLAWFRKQMLISGVGPSRI---DIVTGWGRRSRV- 803
                     +++ DG  ++  + + L  F   M+ +G+ P+ +    +V G+ +  R+ 
Sbjct: 539 ---------YNMLMDGYCLVGKMEKALRVF-DAMVSAGIEPNVVGYGTLVNGYCKIGRID 588

Query: 804 TGTSLVRQAVQE 815
            G SL R+ +Q+
Sbjct: 589 EGLSLFREMLQK 600



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 86/311 (27%), Positives = 152/311 (48%), Gaps = 1/311 (0%)

Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLI 402
           A+  F  +RRQ+    D     T++G L +  +      + D M   G  P+V +Y  ++
Sbjct: 310 AVRVFKEMRRQSILP-DVVALNTLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYTIML 368

Query: 403 HSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLS 462
           + Y     L +  D+F  M   G  PD  T+  LI  +A  G LD AM ++ +M+  G+ 
Sbjct: 369 NGYATKGCLVDMTDLFDLMLGDGIAPDIYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVK 428

Query: 463 PDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKL 522
           P   TY  +I  L + G +  A + F +M++QG +P+   Y+ +I       +   A +L
Sbjct: 429 PHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQGVVPDKYAYHCLIQGFCTHGSLLKAKEL 488

Query: 523 YRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGK 582
             ++ N G   D V +  ++  L   G + +A+ +F         PD  VY +L+D +  
Sbjct: 489 ISEIMNNGMRLDIVFFGSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCL 548

Query: 583 AGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQT 642
            G + KA   ++AM+ AG+ PNV    +L++ + ++G++ +   L + ML  G+KPS   
Sbjct: 549 VGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTIL 608

Query: 643 YTLLLSCCTEA 653
           Y +++    EA
Sbjct: 609 YNIIIDGLFEA 619



 Score =  132 bits (332), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 104/396 (26%), Positives = 177/396 (44%), Gaps = 18/396 (4%)

Query: 359 DEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVF 418
           D  +YT M+           +  L D M+ DG  P++ T+N LI +Y     L++A+ +F
Sbjct: 360 DVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFNVLIKAYANCGMLDKAMIIF 419

Query: 419 KQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKA 478
            +M+  G +P  VTY T+I    + G +D AM+ + +M   G+ PD + Y  +I      
Sbjct: 420 NEMRDHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQGVVPDKYAYHCLIQGFCTH 479

Query: 479 GHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTY 538
           G L  A +L  E++N G   ++V +  +I    K      A  ++    N G  PD V Y
Sbjct: 480 GSLLKAKELISEIMNNGMRLDIVFFGSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVY 539

Query: 539 SIVMEVLGHC--GYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAM 596
           +++M+  G+C  G +++A  VF  M      P+   YG LV+ + K G + +    +  M
Sbjct: 540 NMLMD--GYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREM 597

Query: 597 LQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSP 656
           LQ G++P+    N ++      G+   A      M   G+  +  TY+++L    + R  
Sbjct: 598 LQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSIVLRGLFKNRCF 657

Query: 657 YDMGFC-HELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRESKRGLVDA 715
            +  F   EL A++     + L +M +     + V +    F  +       S+ GLV  
Sbjct: 658 DEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASI-------SRSGLVPC 710

Query: 716 VVDF------LHKSGLKEEAGSVWEVAAQKNVYPDA 745
            V +      L K GL EEA  ++         PD+
Sbjct: 711 AVTYSIMITNLLKEGLVEEAEDMFSSMQNAGCEPDS 746



 Score =  117 bits (294), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 71/270 (26%), Positives = 132/270 (48%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           G + D   + +++  L +  +      + D  V  G  P+ V YN L+  Y     + +A
Sbjct: 496 GMRLDIVFFGSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKA 555

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
           L VF  M   G EP+ V Y TL++ + K G +D  + ++++M   G+ P T  Y++II+ 
Sbjct: 556 LRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDG 615

Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPD 534
           L +AG    A   F EM   G   N  TY+I++    K R +  A+ L+++++    + D
Sbjct: 616 LFEAGRTVPAKVKFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKID 675

Query: 535 KVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYE 594
            +T + ++  +     ++EA+ +FA + R   VP    Y +++    K G V +A + + 
Sbjct: 676 IITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCAVTYSIMITNLLKEGLVEEAEDMFS 735

Query: 595 AMLQAGLRPNVPTCNSLLSAFLRVGQLSDA 624
           +M  AG  P+    N ++   L+  ++  A
Sbjct: 736 SMQNAGCEPDSRLLNHVVRELLKKNEIVRA 765



 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 76/302 (25%), Positives = 140/302 (46%), Gaps = 4/302 (1%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           G   D +T+  ++              + ++M   G +P+VVTY  +I +  R   +++A
Sbjct: 391 GIAPDIYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDA 450

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
           ++ F QM   G  PD+  Y  LI      G L  A ++  ++   G+  D   +  IIN 
Sbjct: 451 MEKFNQMIDQGVVPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMRLDIVFFGSIINN 510

Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPD 534
           L K G +  A  +F   VN G  P+ V YN+++         + AL+++  M +AG EP+
Sbjct: 511 LCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPN 570

Query: 535 KVTYSIVMEVLGHC--GYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEW 592
            V Y  ++   G+C  G +DE  ++F EM +K   P   +Y +++D   +AG    A   
Sbjct: 571 VVGYGTLVN--GYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVK 628

Query: 593 YEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTE 652
           +  M ++G+  N  T + +L    +     +A  L + +  + +K  + T   +++   +
Sbjct: 629 FHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQ 688

Query: 653 AR 654
            R
Sbjct: 689 TR 690



 Score =  105 bits (261), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 77/281 (27%), Positives = 126/281 (44%), Gaps = 3/281 (1%)

Query: 393 PNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMD- 451
           P   TY  L+    RA+    AL  F Q+   G   D +    L+    +A   D A+D 
Sbjct: 111 PTSYTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDAIIASHLLKGFCEAKRTDEALDI 170

Query: 452 MYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQG--CIPNLVTYNIMIAL 509
           +  +    G  PD F+Y++++  L   G    A  L   M   G  C P++V YN +I  
Sbjct: 171 LLHRTPELGCVPDVFSYNILLKSLCNQGKSGQADDLLRMMAEGGTVCSPDVVAYNTVIDG 230

Query: 510 QAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPD 569
             K  +   A  L+++M   G  PD VTYS V+  L     +D+AEA   +M  K  +PD
Sbjct: 231 FFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPD 290

Query: 570 EPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQ 629
              Y  L+  +   G  ++A   ++ M +  + P+V   N+L+ +  + G++ +A  +  
Sbjct: 291 NWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVALNTLMGSLCKYGKIKEARDVFD 350

Query: 630 GMLNLGLKPSLQTYTLLLSCCTEARSPYDMGFCHELMAVSG 670
            M   G  P + +YT++L+         DM    +LM   G
Sbjct: 351 TMAMKGQNPDVFSYTIMLNGYATKGCLVDMTDLFDLMLGDG 391



 Score =  101 bits (251), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 73/326 (22%), Positives = 150/326 (46%), Gaps = 4/326 (1%)

Query: 326 DAYQANQVLKQLQDHTV---ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKL 382
           D Y  N ++K   +  +   A+  FN +R   G K    TY T++  L R  +     + 
Sbjct: 395 DIYTFNVLIKAYANCGMLDKAMIIFNEMRDH-GVKPHVVTYMTVIAALCRIGKMDDAMEK 453

Query: 383 LDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAK 442
            +QM+  G  P+   Y+ LI  +     L +A ++  ++   G   D V + ++I+   K
Sbjct: 454 FNQMIDQGVVPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMRLDIVFFGSIINNLCK 513

Query: 443 AGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVT 502
            G +  A +++      GL PD   Y+++++     G ++ A ++F  MV+ G  PN+V 
Sbjct: 514 LGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVG 573

Query: 503 YNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMR 562
           Y  ++    K       L L+R+M   G +P  + Y+I+++ L   G    A+  F EM 
Sbjct: 574 YGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMT 633

Query: 563 RKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLS 622
                 ++  Y +++    K     +A   ++ +    ++ ++ T N++++   +  ++ 
Sbjct: 634 ESGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVE 693

Query: 623 DAYHLLQGMLNLGLKPSLQTYTLLLS 648
           +A  L   +   GL P   TY+++++
Sbjct: 694 EAKDLFASISRSGLVPCAVTYSIMIT 719



 Score = 90.9 bits (224), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 64/250 (25%), Positives = 110/250 (44%), Gaps = 35/250 (14%)

Query: 381 KLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLID-- 438
           ++ D MV  G +PNVV Y  L++ Y +   ++E L +F++M   G +P  + Y  +ID  
Sbjct: 557 RVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGL 616

Query: 439 ------IHAKAGF---------------------------LDVAMDMYKKMQAAGLSPDT 465
                 + AK  F                            D A+ ++K+++A  +  D 
Sbjct: 617 FEAGRTVPAKVKFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDI 676

Query: 466 FTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRD 525
            T + +I  + +   ++ A  LF  +   G +P  VTY+IMI    K    + A  ++  
Sbjct: 677 ITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCAVTYSIMITNLLKEGLVEEAEDMFSS 736

Query: 526 MQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGN 585
           MQNAG EPD    + V+  L     +  A A  +++  +N+  +     LLVDL+   G 
Sbjct: 737 MQNAGCEPDSRLLNHVVRELLKKNEIVRAGAYLSKIDERNFSLEHLTAMLLVDLFSSKGT 796

Query: 586 VRKAWEWYEA 595
            R+   +  A
Sbjct: 797 CREQIRFLPA 806



 Score = 60.5 bits (145), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 40/148 (27%), Positives = 71/148 (47%), Gaps = 2/148 (1%)

Query: 353 QAGFKHDEHTYTTMV-GILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           Q G K     Y  ++ G+    R   A  K   +M   G   N  TY+ ++    +    
Sbjct: 599 QKGIKPSTILYNIIIDGLFEAGRTVPAKVKF-HEMTESGIAMNKCTYSIVLRGLFKNRCF 657

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
           +EA+ +FK+++ +  + D +T  T+I    +   ++ A D++  +  +GL P   TYS++
Sbjct: 658 DEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCAVTYSIM 717

Query: 472 INCLGKAGHLQAAHQLFCEMVNQGCIPN 499
           I  L K G ++ A  +F  M N GC P+
Sbjct: 718 ITNLLKEGLVEEAEDMFSSMQNAGCEPD 745



 Score = 47.4 bits (111), Expect = 0.038,   Method: Compositional matrix adjust.
 Identities = 29/87 (33%), Positives = 41/87 (47%), Gaps = 1/87 (1%)

Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLI 402
           A+  F  LR     K D  T  TM+  + + R+      L   + R G  P  VTY+ +I
Sbjct: 660 AIFLFKELR-AMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCAVTYSIMI 718

Query: 403 HSYGRANYLNEALDVFKQMQVVGCEPD 429
            +  +   + EA D+F  MQ  GCEPD
Sbjct: 719 TNLLKEGLVEEAEDMFSSMQNAGCEPD 745


>gi|15218241|ref|NP_172439.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75097039|sp|O04491.1|PPR26_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At1g09680
 gi|2160161|gb|AAB60724.1| F21M12.7 gene product [Arabidopsis thaliana]
 gi|332190358|gb|AEE28479.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 607

 Score =  152 bits (383), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 87/269 (32%), Positives = 148/269 (55%), Gaps = 4/269 (1%)

Query: 381 KLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIH 440
           +L  QM +   +P+V TY+ LI++  + N ++ A  +F +M   G  P+ V + TLI  H
Sbjct: 296 RLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGH 355

Query: 441 AKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNL 500
           ++ G +D+  + Y+KM + GL PD   Y+ ++N   K G L AA  +   M+ +G  P+ 
Sbjct: 356 SRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDK 415

Query: 501 VTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHC--GYLDEAEAVF 558
           +TY  +I    +  + ++AL++ ++M   G E D+V +S +  V G C  G + +AE   
Sbjct: 416 ITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSAL--VCGMCKEGRVIDAERAL 473

Query: 559 AEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRV 618
            EM R    PD+  Y +++D + K G+ +  ++  + M   G  P+V T N LL+   ++
Sbjct: 474 REMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGLCKL 533

Query: 619 GQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
           GQ+ +A  LL  MLN+G+ P   TY  LL
Sbjct: 534 GQMKNADMLLDAMLNIGVVPDDITYNTLL 562



 Score =  131 bits (329), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 79/271 (29%), Positives = 136/271 (50%)

Query: 377 GAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTL 436
           G I     +++  G   NV  +N L++ + +   +++A  VF ++     +P  V++ TL
Sbjct: 222 GTIWGFYMEILDAGFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTL 281

Query: 437 IDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGC 496
           I+ + K G LD    +  +M+ +   PD FTYS +IN L K   +  AH LF EM  +G 
Sbjct: 282 INGYCKVGNLDEGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGL 341

Query: 497 IPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEA 556
           IPN V +  +I   ++        + Y+ M + G +PD V Y+ ++      G L  A  
Sbjct: 342 IPNDVIFTTLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARN 401

Query: 557 VFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFL 616
           +   M R+   PD+  Y  L+D + + G+V  A E  + M Q G+  +    ++L+    
Sbjct: 402 IVDGMIRRGLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMC 461

Query: 617 RVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
           + G++ DA   L+ ML  G+KP   TYT+++
Sbjct: 462 KEGRVIDAERALREMLRAGIKPDDVTYTMMM 492



 Score =  120 bits (300), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 75/267 (28%), Positives = 127/267 (47%)

Query: 359 DEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVF 418
           D  TY+ ++  L +  +    + L D+M + G  PN V +  LIH + R   ++   + +
Sbjct: 309 DVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRNGEIDLMKESY 368

Query: 419 KQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKA 478
           ++M   G +PD V Y TL++   K G L  A ++   M   GL PD  TY+ +I+   + 
Sbjct: 369 QKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTTLIDGFCRG 428

Query: 479 GHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTY 538
           G ++ A ++  EM   G   + V ++ ++    K      A +  R+M  AG +PD VTY
Sbjct: 429 GDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREMLRAGIKPDDVTY 488

Query: 539 SIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQ 598
           +++M+     G       +  EM+    VP    Y +L++   K G ++ A    +AML 
Sbjct: 489 TMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGLCKLGQMKNADMLLDAMLN 548

Query: 599 AGLRPNVPTCNSLLSAFLRVGQLSDAY 625
            G+ P+  T N+LL    R    S  Y
Sbjct: 549 IGVVPDDITYNTLLEGHHRHANSSKRY 575



 Score =  113 bits (283), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 81/338 (23%), Positives = 147/338 (43%), Gaps = 32/338 (9%)

Query: 344 LGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMV-RDGCQPNVVTYNRLI 402
             FF ++  Q GF+    TY  +   L     F     L++ +V R G       +  L+
Sbjct: 102 FAFFKFISSQPGFRFTVETYFVLARFLAVHEMFTEAQSLIELVVSRKGKNSASSVFISLV 161

Query: 403 HS--YGRANYLNEALDVFKQMQVVGCEPDRVTYCTL-------IDIHAKAGFLDVAMDM- 452
                    +L +AL +      +G  PD +    L       + I      LD  M + 
Sbjct: 162 EMRVTPMCGFLVDALMI--TYTDLGFIPDAIQCFRLSRKHRFDVPIRGCGNLLDRMMKLN 219

Query: 453 --------YKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYN 504
                   Y ++  AG   + + +++++N   K G++  A ++F E+  +   P +V++N
Sbjct: 220 PTGTIWGFYMEILDAGFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFN 279

Query: 505 IMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRK 564
            +I    K  N     +L   M+ +   PD  TYS ++  L     +D A  +F EM ++
Sbjct: 280 TLINGYCKVGNLDEGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKR 339

Query: 565 NWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDA 624
             +P++ ++  L+    + G +    E Y+ ML  GL+P++   N+L++ F + G L  A
Sbjct: 340 GLIPNDVIFTTLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAA 399

Query: 625 YHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGFC 662
            +++ GM+  GL+P   TYT L+            GFC
Sbjct: 400 RNIVDGMIRRGLRPDKITYTTLID-----------GFC 426



 Score =  104 bits (259), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 61/193 (31%), Positives = 100/193 (51%), Gaps = 2/193 (1%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           G + D   Y T+V    +     A   ++D M+R G +P+ +TY  LI  + R   +  A
Sbjct: 375 GLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTTLIDGFCRGGDVETA 434

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
           L++ K+M   G E DRV +  L+    K G +  A    ++M  AG+ PD  TY+++++ 
Sbjct: 435 LEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREMLRAGIKPDDVTYTMMMDA 494

Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPD 534
             K G  Q   +L  EM + G +P++VTYN+++    K    ++A  L   M N G  PD
Sbjct: 495 FCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGLCKLGQMKNADMLLDAMLNIGVVPD 554

Query: 535 KVTYSIVMEVLGH 547
            +TY+ ++E  GH
Sbjct: 555 DITYNTLLE--GH 565



 Score = 57.0 bits (136), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 39/126 (30%), Positives = 61/126 (48%), Gaps = 3/126 (2%)

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
           +AG K D+ TYT M+    +        KLL +M  DG  P+VVTYN L++   +   + 
Sbjct: 478 RAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGLCKLGQMK 537

Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
            A  +   M  +G  PD +TY TL++ H +      +   Y +    G+  D  +Y  I+
Sbjct: 538 NADMLLDAMLNIGVVPDDITYNTLLEGHHRHA---NSSKRYIQKPEIGIVADLASYKSIV 594

Query: 473 NCLGKA 478
           N L +A
Sbjct: 595 NELDRA 600


>gi|222613080|gb|EEE51212.1| hypothetical protein OsJ_32033 [Oryza sativa Japonica Group]
          Length = 1144

 Score =  152 bits (383), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 91/322 (28%), Positives = 151/322 (46%), Gaps = 35/322 (10%)

Query: 362 TYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQM 421
           TY++++  L +A+      ++L  MV++G  PN  TYN ++H Y  +    EA+   K+M
Sbjct: 236 TYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKM 295

Query: 422 QVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHL 481
              G EPD VTY +L+D   K G    A  M+  M   GL P+  TY  ++      G L
Sbjct: 296 HSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGAL 355

Query: 482 QAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIV 541
              H L   MV  G  PN   ++I+I   AK      A+ ++  M+  G  PD VTY  V
Sbjct: 356 VEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTV 415

Query: 542 MEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLV------DLWGKA------------ 583
           + +L   G +++A   F +M  +   P   VY  L+      D W KA            
Sbjct: 416 IGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGI 475

Query: 584 -----------------GNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYH 626
                            G V ++ + ++ M++ G++P++ T ++L+  +   G++ +A  
Sbjct: 476 CLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATK 535

Query: 627 LLQGMLNLGLKPSLQTYTLLLS 648
           LL  M+++G+KP   TY  L++
Sbjct: 536 LLASMVSVGMKPDCVTYNTLIN 557



 Score =  150 bits (378), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 103/416 (24%), Positives = 193/416 (46%), Gaps = 5/416 (1%)

Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLI 402
           A+GF   +    G + D  TY +++  L +  +     K+ D M + G +P + TY  L+
Sbjct: 288 AIGFLKKMHSD-GVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLL 346

Query: 403 HSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLS 462
             Y     L E   +   M   G  P+   +  LI  +AK G +D AM ++ KM+  GL+
Sbjct: 347 QGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLN 406

Query: 463 PDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKL 522
           PDT TY  +I  L K+G ++ A + F +M+++   P  + YN +I        +  A +L
Sbjct: 407 PDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKEL 466

Query: 523 YRDMQNAGFEPDKVTYSIVMEVLGHC--GYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLW 580
             +M + G   D + ++ +++   HC  G + E+E +F  M R    PD   Y  L+D +
Sbjct: 467 ILEMLDRGICLDTIFFNSIID--SHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGY 524

Query: 581 GKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSL 640
             AG + +A +   +M+  G++P+  T N+L++ + ++ ++ DA  L + M + G+ P +
Sbjct: 525 CLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDI 584

Query: 641 QTYTLLLSCCTEARSPYDMGFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEM 700
            TY ++L    + R        +  +  SG    +   ++   G    N+ D      + 
Sbjct: 585 ITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQN 644

Query: 701 MHSEDRESKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAVKEKGMSYWLI 756
           +   D + +    + ++  L K G  +EA  ++   +   + PD      M+  LI
Sbjct: 645 LCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLI 700



 Score =  147 bits (370), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 96/327 (29%), Positives = 159/327 (48%), Gaps = 4/327 (1%)

Query: 353 QAGFKHDEHTYTTMV-GILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           + GF+ D   +T ++ G+    R   A++ +L +M + GC PNV +YN L+      N  
Sbjct: 119 KKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTQLGCIPNVFSYNILLKGLCDENRS 178

Query: 412 NEALDVFKQMQVVG--CEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYS 469
            EAL++ + M   G  C PD V+Y T+I+   K G LD A   Y +M   G+ P+  TYS
Sbjct: 179 QEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYS 238

Query: 470 VIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNA 529
            II  L KA  +  A ++   MV  G +PN  TYN ++     +   + A+   + M + 
Sbjct: 239 SIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSD 298

Query: 530 GFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKA 589
           G EPD VTY+ +M+ L   G   EA  +F  M ++   P+   YG L+  +   G + + 
Sbjct: 299 GVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEM 358

Query: 590 WEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTY-TLLLS 648
               + M++ G+ PN    + L+ A+ + G++  A  +   M   GL P   TY T++  
Sbjct: 359 HGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGI 418

Query: 649 CCTEARSPYDMGFCHELMAVSGHPAHM 675
            C   R    M +  +++     P ++
Sbjct: 419 LCKSGRVEDAMRYFEQMIDERLSPGNI 445



 Score =  127 bits (318), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 73/244 (29%), Positives = 133/244 (54%)

Query: 381 KLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIH 440
           KL D MVR G +P+++TY+ LI  Y  A  ++EA  +   M  VG +PD VTY TLI+ +
Sbjct: 500 KLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGY 559

Query: 441 AKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNL 500
            K   ++ A+ ++++M+++G+SPD  TY++I+  L +     AA +L+  +   G    L
Sbjct: 560 CKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLEL 619

Query: 501 VTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAE 560
            TYNI++    K      AL++++++     + +  T++I++  L   G  DEA+ +FA 
Sbjct: 620 STYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAA 679

Query: 561 MRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQ 620
           +     VPD   Y L+ +   + G + +  + + +M + G   N    NS++   L+ G 
Sbjct: 680 LSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIVRKLLQRGD 739

Query: 621 LSDA 624
           ++ A
Sbjct: 740 ITRA 743



 Score =  107 bits (267), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 91/359 (25%), Positives = 152/359 (42%), Gaps = 5/359 (1%)

Query: 389 DGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDV 448
           D   PN+ TY  LI S   A  L+        +   G   D + +  L+           
Sbjct: 85  DEVTPNLCTYGILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSD 144

Query: 449 AMDM-YKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQG--CIPNLVTYNI 505
           AMD+  ++M   G  P+ F+Y++++  L      Q A +L   M + G  C P++V+Y  
Sbjct: 145 AMDIVLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTT 204

Query: 506 MIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKN 565
           +I    K  +   A   Y +M + G  P+ VTYS ++  L     +D+A  V   M +  
Sbjct: 205 VINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNG 264

Query: 566 WVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAY 625
            +P+   Y  +V  +  +G  ++A  + + M   G+ P+V T NSL+    + G+ ++A 
Sbjct: 265 VMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEAR 324

Query: 626 HLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGFCHELMAVSG-HPAHMFLLSMPSPG 684
            +   M   GLKP + TY  LL       +  +M    +LM  +G HP H ++ S+    
Sbjct: 325 KMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNH-YVFSILICA 383

Query: 685 PDGQNVRDHVGSFLEMMHSEDRESKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYP 743
              Q   D        M  +           V+  L KSG  E+A   +E    + + P
Sbjct: 384 YAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSP 442


>gi|218191892|gb|EEC74319.1| hypothetical protein OsI_09597 [Oryza sativa Indica Group]
          Length = 1167

 Score =  152 bits (383), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 125/471 (26%), Positives = 210/471 (44%), Gaps = 49/471 (10%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           G   D  TY  ++  L ++R+      LLD+M     +PNVV Y  LI  + R    +EA
Sbjct: 182 GLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGFMREGNADEA 241

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
             + K+M   G +P+++TY  L+    K G +D A  + K+M      PDT TY++II  
Sbjct: 242 FKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLIIEG 301

Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPD 534
             +  + + A +L  EM N G  PN+ TY+IMI    ++   + A  L  +M   G +P+
Sbjct: 302 HFRHHNKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPN 361

Query: 535 KVTYSIVMEVLGHC--GYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEW 592
              Y+ ++   G+C  G +  A  +F +M + N +PD   Y  L+    K G V ++ ++
Sbjct: 362 AFVYAPLIS--GYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKY 419

Query: 593 YEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS---- 648
           +  M + GL PN  T + L+  +L+ G L  A  L+Q ML+ GLKP+   Y  LL     
Sbjct: 420 FAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFK 479

Query: 649 ------CCTEARSPYDMG----------FCHELMAVSGHPAHMFLLSMPSPGPDGQNVRD 692
                   +  +S  D G            H L +     A   +LS         +V  
Sbjct: 480 SDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSEIEKNGSVPDVHV 539

Query: 693 HVGSFLEMMHSEDRESKRGLVD---------------AVVDFLHKSGLKEEAGSVWEVAA 737
           +      +  + DRE   G++D               A++D L KSG         +++ 
Sbjct: 540 YSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSG---------DISY 590

Query: 738 QKNVYPDAVKEKGMSYWLINLHVMSDGTAVIALSRTLAWFRKQMLISGVGP 788
            +NV+ +++  KG+    +    + DG+  +       +   +ML +G+ P
Sbjct: 591 ARNVF-NSILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITP 640



 Score =  143 bits (361), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 103/395 (26%), Positives = 182/395 (46%), Gaps = 1/395 (0%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
             AG   + +TY+ M+  L ++ +    + LL++M   G +PN   Y  LI  Y R   +
Sbjct: 319 ENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNV 378

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
           + A ++F +M  V   PD   Y +LI   +K G ++ +   + +MQ  GL P+ FTYS +
Sbjct: 379 SLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGL 438

Query: 472 INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF 531
           I+   K G L++A QL   M++ G  PN V Y  ++    K+ + +     ++ M + G 
Sbjct: 439 IHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGV 498

Query: 532 EPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWE 591
             D   Y I++  L   G ++ A  V +E+ +   VPD  VY  L+    K  +  KA+ 
Sbjct: 499 MLDNRIYGILIHNLSSSGNMEAAFRVLSEIEKNGSVPDVHVYSSLISGLCKTADREKAFG 558

Query: 592 WYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCT 651
             + M + G+ PN+   N+L+    + G +S A ++   +L  GL P+  TYT L+    
Sbjct: 559 ILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLVPNCVTYTSLIDGSC 618

Query: 652 EARSPYDMGFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRESKRG 711
           +     +  + +  M  +G     F+ S+ + G       +     +E M      S   
Sbjct: 619 KVGDISNAFYLYNEMLATGITPDAFVYSVLTTGCSSAGDLEQAMFLIEEMFLRGHASISS 678

Query: 712 LVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAV 746
             + +VD   K G  +E   +  V   + + P+A+
Sbjct: 679 F-NNLVDGFCKRGKMQETLKLLHVIMGRGLVPNAL 712



 Score =  137 bits (344), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 92/295 (31%), Positives = 141/295 (47%), Gaps = 11/295 (3%)

Query: 370 LGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPD 429
           L RA     + K+ + MV  G  P+V TY+ LI +Y +    + A  V  +M+  GC  +
Sbjct: 92  LLRADAMALLWKVREFMVGAGISPDVYTYSTLIEAYCKVREFDTAKKVLVEMRERGCGLN 151

Query: 430 RVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFC 489
            VTY  LI    ++G ++ A    K M+  GL PD FTY  +IN L K+     A  L  
Sbjct: 152 TVTYNVLIAGLCRSGAVEEAFGFKKDMEDYGLVPDGFTYGALINGLCKSRRSNEAKALLD 211

Query: 490 EMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCG 549
           EM      PN+V Y  +I    +  N   A K+ ++M  AG +P+K+TY  ++  L   G
Sbjct: 212 EMSCAELKPNVVVYANLIDGFMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMG 271

Query: 550 YLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCN 609
            +D A  +  +M R +  PD   Y L+++   +  N + A+     M  AG+ PNV T +
Sbjct: 272 QMDRASLLLKQMVRDSHRPDTITYNLIIEGHFRHHNKKDAFRLLSEMENAGISPNVYTYS 331

Query: 610 SLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGFCHE 664
            ++    + G+   A  LL+ M   GLKP+   Y  L+S           G+C E
Sbjct: 332 IMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLIS-----------GYCRE 375



 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 86/296 (29%), Positives = 141/296 (47%), Gaps = 4/296 (1%)

Query: 354 AGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNE 413
           AG   D +TY+T++    + R+F    K+L +M   GC  N VTYN LI    R+  + E
Sbjct: 111 AGISPDVYTYSTLIEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEE 170

Query: 414 ALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIIN 473
           A    K M+  G  PD  TY  LI+   K+   + A  +  +M  A L P+   Y+ +I+
Sbjct: 171 AFGFKKDMEDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLID 230

Query: 474 CLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEP 533
              + G+   A ++  EMV  G  PN +TY+ ++    K      A  L + M      P
Sbjct: 231 GFMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRP 290

Query: 534 DKVTYSIVMEVLGHCGYLDEAEA--VFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWE 591
           D +TY++++E  GH  + ++ +A  + +EM      P+   Y +++    ++G   KA +
Sbjct: 291 DTITYNLIIE--GHFRHHNKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASD 348

Query: 592 WYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
             E M   GL+PN      L+S + R G +S A  +   M  + + P L  Y  L+
Sbjct: 349 LLEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLI 404



 Score =  123 bits (308), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 81/313 (25%), Positives = 151/313 (48%), Gaps = 1/313 (0%)

Query: 354 AGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNE 413
           AG + ++ TY  +V  L +  Q    + LL QMVRD  +P+ +TYN +I  + R +   +
Sbjct: 251 AGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLIIEGHFRHHNKKD 310

Query: 414 ALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIIN 473
           A  +  +M+  G  P+  TY  +I    ++G  + A D+ ++M   GL P+ F Y+ +I+
Sbjct: 311 AFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLIS 370

Query: 474 CLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEP 533
              + G++  A ++F +M     +P+L  YN +I   +K    + + K +  MQ  G  P
Sbjct: 371 GYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLP 430

Query: 534 DKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWY 593
           ++ TYS ++      G L+ AE +   M      P++ +Y  L++ + K+ ++ K    +
Sbjct: 431 NEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTF 490

Query: 594 EAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS-CCTE 652
           ++ML  G+  +      L+      G +  A+ +L  +   G  P +  Y+ L+S  C  
Sbjct: 491 KSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSEIEKNGSVPDVHVYSSLISGLCKT 550

Query: 653 ARSPYDMGFCHEL 665
           A      G   E+
Sbjct: 551 ADREKAFGILDEM 563



 Score =  112 bits (280), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 86/306 (28%), Positives = 144/306 (47%), Gaps = 30/306 (9%)

Query: 359 DEHTYTTMVGIL----GRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           D H Y++++  L     R + FG    +LD+M + G  PN+V YN LI    ++  ++ A
Sbjct: 536 DVHVYSSLISGLCKTADREKAFG----ILDEMSKKGVDPNIVCYNALIDGLCKSGDISYA 591

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
            +VF  +   G  P+ VTY +LID   K G +  A  +Y +M A G++PD F YSV+   
Sbjct: 592 RNVFNSILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLTTG 651

Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPD 534
              AG L+ A  L  EM  +G   ++ ++N ++    K    Q  LKL   +   G  P+
Sbjct: 652 CSSAGDLEQAMFLIEEMFLRGH-ASISSFNNLVDGFCKRGKMQETLKLLHVIMGRGLVPN 710

Query: 535 KVTYSIVMEVLGHCGYLDEAEAVFAEMRRKN-------------------WVPDEPVYGL 575
            +T   ++  L   G L E   +F E+++K                     +P + V  +
Sbjct: 711 ALTIENIISGLSEAGKLSEVHTIFVELQQKTSESAARHFSSLFMDMINQGKIPLDVVDDM 770

Query: 576 LVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLG 635
           + D   K GN+ KA    + ++         +  +++    R G+LS+A +LL+ M   G
Sbjct: 771 IRD-HCKEGNLDKALMLRDVIVAKSAPMGCSSYLAIVDNLCRKGKLSEALNLLKEMDKRG 829

Query: 636 -LKPSL 640
            L+P+L
Sbjct: 830 NLQPTL 835



 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 77/302 (25%), Positives = 143/302 (47%), Gaps = 1/302 (0%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           ++ G   +E TY+ ++    +     +  +L+ +M+  G +PN V Y  L+ SY +++ +
Sbjct: 424 QERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDI 483

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
            +    FK M   G   D   Y  LI   + +G ++ A  +  +++  G  PD   YS +
Sbjct: 484 EKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSEIEKNGSVPDVHVYSSL 543

Query: 472 INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF 531
           I+ L K    + A  +  EM  +G  PN+V YN +I    K+ +   A  ++  +   G 
Sbjct: 544 ISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGL 603

Query: 532 EPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWE 591
            P+ VTY+ +++     G +  A  ++ EM      PD  VY +L      AG++ +A  
Sbjct: 604 VPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLTTGCSSAGDLEQAMF 663

Query: 592 WYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCT 651
             E M   G   ++ + N+L+  F + G++ +   LL  ++  GL P+  T   ++S  +
Sbjct: 664 LIEEMFLRG-HASISSFNNLVDGFCKRGKMQETLKLLHVIMGRGLVPNALTIENIISGLS 722

Query: 652 EA 653
           EA
Sbjct: 723 EA 724



 Score = 87.4 bits (215), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 56/209 (26%), Positives = 106/209 (50%)

Query: 435 TLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQ 494
            L+D + K+G +  A ++   M+  GL+P     + ++  L +A  +    ++   MV  
Sbjct: 52  VLVDTYKKSGRVQDAAEVVLMMRDRGLAPSIRCCNALLKDLLRADAMALLWKVREFMVGA 111

Query: 495 GCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEA 554
           G  P++ TY+ +I    K R + +A K+  +M+  G   + VTY++++  L   G ++EA
Sbjct: 112 GISPDVYTYSTLIEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEEA 171

Query: 555 EAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSA 614
                +M     VPD   YG L++   K+    +A    + M  A L+PNV    +L+  
Sbjct: 172 FGFKKDMEDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDG 231

Query: 615 FLRVGQLSDAYHLLQGMLNLGLKPSLQTY 643
           F+R G   +A+ +++ M+  G++P+  TY
Sbjct: 232 FMREGNADEAFKMIKEMVAAGVQPNKITY 260



 Score = 49.7 bits (117), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 26/83 (31%), Positives = 44/83 (53%)

Query: 572 VYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGM 631
           V  +LVD + K+G V+ A E    M   GL P++  CN+LL   LR   ++  + + + M
Sbjct: 49  VLDVLVDTYKKSGRVQDAAEVVLMMRDRGLAPSIRCCNALLKDLLRADAMALLWKVREFM 108

Query: 632 LNLGLKPSLQTYTLLLSCCTEAR 654
           +  G+ P + TY+ L+    + R
Sbjct: 109 VGAGISPDVYTYSTLIEAYCKVR 131



 Score = 39.7 bits (91), Expect = 6.5,   Method: Compositional matrix adjust.
 Identities = 32/128 (25%), Positives = 61/128 (47%), Gaps = 3/128 (2%)

Query: 522 LYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPD-EPVYGLLVDLW 580
           ++R + ++G     V   ++++     G + +A  V   MR +   P       LL DL 
Sbjct: 35  IHRALSDSGHRSPAV-LDVLVDTYKKSGRVQDAAEVVLMMRDRGLAPSIRCCNALLKDLL 93

Query: 581 GKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSL 640
            +A  +   W+  E M+ AG+ P+V T ++L+ A+ +V +   A  +L  M   G   + 
Sbjct: 94  -RADAMALLWKVREFMVGAGISPDVYTYSTLIEAYCKVREFDTAKKVLVEMRERGCGLNT 152

Query: 641 QTYTLLLS 648
            TY +L++
Sbjct: 153 VTYNVLIA 160


>gi|225456753|ref|XP_002268934.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g74580 [Vitis vinifera]
 gi|297733985|emb|CBI15232.3| unnamed protein product [Vitis vinifera]
          Length = 764

 Score =  152 bits (383), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 91/292 (31%), Positives = 151/292 (51%), Gaps = 3/292 (1%)

Query: 381 KLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIH 440
           KL+++M  +GC P++ TYN +I+   +   +++A ++       G  PD  T+ TLID +
Sbjct: 411 KLMNEMSENGCSPDIWTYNLVINGLCKIGCVSDADNLVIDAIAKGHLPDVFTFNTLIDGY 470

Query: 441 AKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNL 500
            K   LD A+++  +M   G+SPD  TY+ I+N L KAG  +     F  M+ +GC+PN+
Sbjct: 471 CKKLKLDNAIEIVDRMWNHGVSPDVITYNSILNGLCKAGKYEDVMGTFKLMMEKGCVPNI 530

Query: 501 VTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAE 560
           +TYNI+     KAR  + AL L  +MQN G  PD V +  +M+     G LD A  +F  
Sbjct: 531 ITYNILTESFCKARKVEEALNLIEEMQNKGLTPDVVNFGTLMKGFCDNGDLDGAYQLFKR 590

Query: 561 MRRK-NWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVG 619
           +  +  +      Y ++++ +    N+  A + +  M + G  P+  T   ++  F + G
Sbjct: 591 VDEQYKFSHTIATYNIMINAFAGKLNMNMAEKLFNKMCENGFSPDSYTYRVMIDGFCKTG 650

Query: 620 QLSDAYHLLQGMLNLGLKPSLQTYTLLLSC-CTEARSPYDMGFCHELMAVSG 670
            ++  Y  L   +  GL PSL T+  +L+C C + R    +G  H LM   G
Sbjct: 651 NINSGYSFLLVKIEKGLIPSLTTFGRVLNCLCLKRRVHEAVGIIH-LMVHKG 701



 Score =  126 bits (316), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 81/319 (25%), Positives = 161/319 (50%), Gaps = 6/319 (1%)

Query: 333 VLKQLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQM---VRD 389
           V+K  ++   AL  FN ++++ GFKH   TY  M+  LG   +F A+ ++L +    + +
Sbjct: 13  VVKYQKNPLKALEIFNSVKKEDGFKHTLLTYKGMIEKLGFHGEFEAMEEVLAETRMNIDN 72

Query: 390 GCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVA 449
           G    V  Y   + +YGR   + EA+DVF++M    CEP   +Y  +++I  +  + D A
Sbjct: 73  GLLEGV--YIGAMRNYGRKGKIQEAVDVFERMDFFNCEPSVQSYNAIMNILVEYRYFDQA 130

Query: 450 MDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIAL 509
             +Y +M+  G+ PD +T+++ +    +     AA +L   M +QGC  + V Y  +I  
Sbjct: 131 HKVYMRMRDKGIVPDVYTFTIRMKSFCRTSRPHAARRLLNNMPSQGCESSAVAYCTVIGG 190

Query: 510 QAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPD 569
             +  +   A +L+ +M   G  PD + ++ ++  L   G++ E+E +  ++ ++   P+
Sbjct: 191 FYEENHRVEAHELFEEMLGLGICPDIMAFNKLIHTLCRKGHVQESERLLNKVLKRGVSPN 250

Query: 570 EPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQ 629
                + +  + +   + +A    +  +  GL P+V T N+L+    +  ++ +A H L+
Sbjct: 251 LFTVNIFIQGFCQRAMLNEAIRLLDG-VGRGLTPDVITYNTLICGLCKNFKVVEAEHYLR 309

Query: 630 GMLNLGLKPSLQTYTLLLS 648
            M+N G +P   TY  ++ 
Sbjct: 310 KMVNEGYEPDGFTYNSIID 328



 Score =  125 bits (314), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 89/288 (30%), Positives = 140/288 (48%), Gaps = 2/288 (0%)

Query: 368 GILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCE 427
           G   RA    AI +LLD + R G  P+V+TYN LI    +   + EA    ++M   G E
Sbjct: 260 GFCQRAMLNEAI-RLLDGVGR-GLTPDVITYNTLICGLCKNFKVVEAEHYLRKMVNEGYE 317

Query: 428 PDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQL 487
           PD  TY ++ID + K G +  A  + +     G  PD  TY  +IN L + G +  A  +
Sbjct: 318 PDGFTYNSIIDGYCKLGMMQNADQILRDGAFKGFVPDESTYCSLINGLCQDGDIDRAINV 377

Query: 488 FCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGH 547
           F E + +G  PNLV  N ++   ++      ALKL  +M   G  PD  TY++V+  L  
Sbjct: 378 FNEAMEKGLKPNLVLCNTLVKGLSQQGLILQALKLMNEMSENGCSPDIWTYNLVINGLCK 437

Query: 548 CGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPT 607
            G + +A+ +  +   K  +PD   +  L+D + K   +  A E  + M   G+ P+V T
Sbjct: 438 IGCVSDADNLVIDAIAKGHLPDVFTFNTLIDGYCKKLKLDNAIEIVDRMWNHGVSPDVIT 497

Query: 608 CNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARS 655
            NS+L+   + G+  D     + M+  G  P++ TY +L     +AR 
Sbjct: 498 YNSILNGLCKAGKYEDVMGTFKLMMEKGCVPNIITYNILTESFCKARK 545



 Score =  125 bits (313), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 124/495 (25%), Positives = 204/495 (41%), Gaps = 98/495 (19%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAIN--KLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
           G   D  TY T+  I G  + F  +     L +MV +G +P+  TYN +I  Y +   + 
Sbjct: 280 GLTPDVITYNTL--ICGLCKNFKVVEAEHYLRKMVNEGYEPDGFTYNSIIDGYCKLGMMQ 337

Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKK----------------- 455
            A  + +     G  PD  TYC+LI+   + G +D A++++ +                 
Sbjct: 338 NADQILRDGAFKGFVPDESTYCSLINGLCQDGDIDRAINVFNEAMEKGLKPNLVLCNTLV 397

Query: 456 ------------------MQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCI 497
                             M   G SPD +TY+++IN L K G +  A  L  + + +G +
Sbjct: 398 KGLSQQGLILQALKLMNEMSENGCSPDIWTYNLVINGLCKIGCVSDADNLVIDAIAKGHL 457

Query: 498 PNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAV 557
           P++ T+N +I    K     +A+++   M N G  PD +TY+ ++  L   G  ++    
Sbjct: 458 PDVFTFNTLIDGYCKKLKLDNAIEIVDRMWNHGVSPDVITYNSILNGLCKAGKYEDVMGT 517

Query: 558 FAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLR 617
           F  M  K  VP+   Y +L + + KA  V +A    E M   GL P+V    +L+  F  
Sbjct: 518 FKLMMEKGCVPNIITYNILTESFCKARKVEEALNLIEEMQNKGLTPDVVNFGTLMKGFCD 577

Query: 618 VGQLSDAYHLLQGM-LNLGLKPSLQTYTLLLSC-----------------CTEARSP--- 656
            G L  AY L + +        ++ TY ++++                  C    SP   
Sbjct: 578 NGDLDGAYQLFKRVDEQYKFSHTIATYNIMINAFAGKLNMNMAEKLFNKMCENGFSPDSY 637

Query: 657 -YDM---GFCHELMAVSGHPAHMFLLS------MPSPGPDG---------QNVRDHVGSF 697
            Y +   GFC      SG+    FLL       +PS    G         + V + VG  
Sbjct: 638 TYRVMIDGFCKTGNINSGYS---FLLVKIEKGLIPSLTTFGRVLNCLCLKRRVHEAVGII 694

Query: 698 LEMMHSEDRESKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAVKEKGMSYWLIN 757
             M+H       +G+V  VV+ + ++  K       EVAA K V  + +K+  ++Y+   
Sbjct: 695 HLMVH-------KGIVPEVVNTIFEADKK-------EVAAPKIVVENLMKKGHITYFA-- 738

Query: 758 LHVMSDGTAVIALSR 772
             ++ DG     LSR
Sbjct: 739 YEILHDGIRDKKLSR 753



 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 47/194 (24%), Positives = 85/194 (43%), Gaps = 20/194 (10%)

Query: 514 RNYQSALKLYRDMQNA-GFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRK--NWVPDE 570
           +N   AL+++  ++   GF+   +TY  ++E LG  G  +  E V AE R    N +  E
Sbjct: 18  KNPLKALEIFNSVKKEDGFKHTLLTYKGMIEKLGFHGEFEAMEEVLAETRMNIDNGLL-E 76

Query: 571 PVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQG 630
            VY   +  +G+ G +++A + +E M      P+V + N++++  +       A+ +   
Sbjct: 77  GVYIGAMRNYGRKGKIQEAVDVFERMDFFNCEPSVQSYNAIMNILVEYRYFDQAHKVYMR 136

Query: 631 MLNLGLKPSLQTYTLLLSCCTEARSPYDMGFCHELMAVSGHPAHMFLLSMPSPGPDGQNV 690
           M + G+ P + T+T+ +        P              H A   L +MPS G +   V
Sbjct: 137 MRDKGIVPDVYTFTIRMKSFCRTSRP--------------HAARRLLNNMPSQGCESSAV 182

Query: 691 R--DHVGSFLEMMH 702
                +G F E  H
Sbjct: 183 AYCTVIGGFYEENH 196


>gi|147841262|emb|CAN75614.1| hypothetical protein VITISV_022293 [Vitis vinifera]
          Length = 590

 Score =  152 bits (383), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 91/296 (30%), Positives = 153/296 (51%), Gaps = 2/296 (0%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           R  GFK   H  T ++  L +AR    + K+  +MVR G  PN+  +N LIH+  ++  +
Sbjct: 154 RVHGFKPHLHACTVLLNSLAKARLTNMVWKVYKKMVRVGVVPNIHIFNVLIHACCKSGDV 213

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
            +A  +  +M+     PD  TY TLI ++ K G    A+ +  +M+  G+SPD  TY+ +
Sbjct: 214 EKAEQLLNEMESRFIFPDLFTYNTLISLYCKKGMHYEALGIQDRMERGGVSPDIVTYNSL 273

Query: 472 INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF 531
           I    + G ++ A +LF E+   G  PN VTY  +I    +  + + AL+L   M+  G 
Sbjct: 274 IYGFCREGRMREALRLFREI--NGATPNHVTYTTLIDGYCRVNDLEEALRLREVMEVEGL 331

Query: 532 EPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWE 591
            P  VTY+ ++  L   G + +A  +  EM  +   PD      L++ + K G++  A +
Sbjct: 332 HPGVVTYNSILRKLCEEGKIKDANRLLNEMSERKVEPDNVTCNTLINAYCKIGDMGSAMK 391

Query: 592 WYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
             + ML+AGL+P+  T  +L+  F ++ ++  A   L  ML+ G  PS  TY+ L+
Sbjct: 392 VKKKMLEAGLKPDQFTFKALIHGFCKLHEVDSAKEFLFEMLDAGFSPSYSTYSWLV 447



 Score =  132 bits (333), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 135/525 (25%), Positives = 221/525 (42%), Gaps = 95/525 (18%)

Query: 301 VSRILRQWKWGPLAEEALGNTNYSMDAYQANQVLKQL--QDHTVALGFFNWLRRQAGFKH 358
           V  I+ +  W  L +  +G+   ++ +   NQVL  L      V+  FF W+       H
Sbjct: 17  VCGIVVKGHWNSLLKPNVGS---NLTSTILNQVLLNLSLDGCCVSWAFFKWVESNLNHXH 73

Query: 359 DEHTYTTMVGILGRARQFGAINKLLDQM-VRDGCQ-PNVVTYNRLIHS------------ 404
              +  TM+  L + +QF     LL+++ VRD    P+V+     IH             
Sbjct: 74  SLQSSWTMIHTLAKHKQFKTAQNLLERIAVRDYLSSPSVLNAVVRIHDDPDSNSQILSWL 133

Query: 405 ---YGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGL 461
              Y  +    +A+ VF+ M+V G +P       L++  AKA   ++   +YKKM   G+
Sbjct: 134 VIFYANSRMTQDAIQVFEHMRVHGFKPHLHACTVLLNSLAKARLTNMVWKVYKKMVRVGV 193

Query: 462 SPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALK 521
            P+   ++V+I+   K+G ++ A QL  EM ++   P+L TYN +I+L  K   +  AL 
Sbjct: 194 VPNIHIFNVLIHACCKSGDVEKAEQLLNEMESRFIFPDLFTYNTLISLYCKKGMHYEALG 253

Query: 522 LYRDMQNAGFEPDKVTYSIVMEVLGHC--GYLDEAEAVFAEMRRKNWVPDEPVYGLLVDL 579
           +   M+  G  PD VTY+ +  + G C  G + EA  +F E+      P+   Y  L+D 
Sbjct: 254 IQDRMERGGVSPDIVTYNSL--IYGFCREGRMREALRLFREI--NGATPNHVTYTTLIDG 309

Query: 580 WGKAGNVRKAWEWYEAMLQAGLRPNV---------------------------------- 605
           + +  ++ +A    E M   GL P V                                  
Sbjct: 310 YCRVNDLEEALRLREVMEVEGLHPGVVTYNSILRKLCEEGKIKDANRLLNEMSERKVEPD 369

Query: 606 -PTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGFC-- 662
             TCN+L++A+ ++G +  A  + + ML  GLKP   T+  L+            GFC  
Sbjct: 370 NVTCNTLINAYCKIGDMGSAMKVKKKMLEAGLKPDQFTFKALIH-----------GFCKL 418

Query: 663 HELMAVSGHPAHMFLLSMPSPG--PDGQNVRDHVGSFLEMMHSE------DRESKRGL-V 713
           HE+       A  FL  M   G  P        V S+ +  + E      D  S++GL V
Sbjct: 419 HEV-----DSAKEFLFEMLDAGFSPSYSTYSWLVDSYYDQDNKEAVIRLPDELSRKGLFV 473

Query: 714 D-----AVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAVKEKGMSY 753
           D     A++  L K    E A  ++ +   K +  D+V    ++Y
Sbjct: 474 DISVYRALIRRLCKIDKIESAERIFTLMQGKGMKGDSVVYTSLAY 518



 Score =  102 bits (254), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 67/235 (28%), Positives = 109/235 (46%)

Query: 362 TYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQM 421
           TYTT++    R        +L + M  +G  P VVTYN ++        + +A  +  +M
Sbjct: 302 TYTTLIDGYCRVNDLEEALRLREVMEVEGLHPGVVTYNSILRKLCEEGKIKDANRLLNEM 361

Query: 422 QVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHL 481
                EPD VT  TLI+ + K G +  AM + KKM  AGL PD FT+  +I+   K   +
Sbjct: 362 SERKVEPDNVTCNTLINAYCKIGDMGSAMKVKKKMLEAGLKPDQFTFKALIHGFCKLHEV 421

Query: 482 QAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIV 541
            +A +   EM++ G  P+  TY+ ++       N ++ ++L  ++   G   D   Y  +
Sbjct: 422 DSAKEFLFEMLDAGFSPSYSTYSWLVDSYYDQDNKEAVIRLPDELSRKGLFVDISVYRAL 481

Query: 542 MEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAM 596
           +  L     ++ AE +F  M+ K    D  VY  L   + KAG    A +  + M
Sbjct: 482 IRRLCKIDKIESAERIFTLMQGKGMKGDSVVYTSLAYAYFKAGKAIAASDMLDEM 536



 Score = 78.2 bits (191), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 55/212 (25%), Positives = 99/212 (46%)

Query: 362 TYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQM 421
           TY +++  L    +    N+LL++M     +P+ VT N LI++Y +   +  A+ V K+M
Sbjct: 337 TYNSILRKLCEEGKIKDANRLLNEMSERKVEPDNVTCNTLINAYCKIGDMGSAMKVKKKM 396

Query: 422 QVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHL 481
              G +PD+ T+  LI    K   +D A +   +M  AG SP   TYS +++      + 
Sbjct: 397 LEAGLKPDQFTFKALIHGFCKLHEVDSAKEFLFEMLDAGFSPSYSTYSWLVDSYYDQDNK 456

Query: 482 QAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIV 541
           +A  +L  E+  +G   ++  Y  +I    K    +SA +++  MQ  G + D V Y+ +
Sbjct: 457 EAVIRLPDELSRKGLFVDISVYRALIRRLCKIDKIESAERIFTLMQGKGMKGDSVVYTSL 516

Query: 542 MEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVY 573
                  G    A  +  EM ++  +    +Y
Sbjct: 517 AYAYFKAGKAIAASDMLDEMDKRRLMITLKIY 548


>gi|297804554|ref|XP_002870161.1| hypothetical protein ARALYDRAFT_915114 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297315997|gb|EFH46420.1| hypothetical protein ARALYDRAFT_915114 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 702

 Score =  152 bits (383), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 122/501 (24%), Positives = 232/501 (46%), Gaps = 20/501 (3%)

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLD---QMVRDGCQPNVVTYNRLIHSYGRAN 409
           + G K D  T+TT++     ARQ G   + ++   +M   GC+P+ VT   +I +YGRA 
Sbjct: 203 ERGVKPDNATFTTIISC---ARQSGVPKRAVEWFEKMSSFGCEPDNVTLAAMIDAYGRAG 259

Query: 410 YLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYS 469
            +  AL ++ + +      D VT+ TLI I+  +G  D  +++Y++M+A G+ P+   Y+
Sbjct: 260 NVEMALSLYDRARTEKWRIDAVTFSTLIRIYGVSGNYDGCLNIYEEMKALGVKPNLVIYN 319

Query: 470 VIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNA 529
            +++ +G+A     A  +  ++++ G  PN  TY  +I    +AR    AL +YR+M+  
Sbjct: 320 RLLDSMGRAKRPWQAKIIHKDLISNGFTPNWSTYAALIRAYGRARYGDDALVIYREMKEK 379

Query: 530 GFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRR-KNWVPDEPVYGLLVDLWGKAGNVRK 588
           G     + Y+ ++ +    GY+DEA  +F +M+  +   PD   +  L+ ++  +G V +
Sbjct: 380 GLSLTVILYNTLLSMCADIGYVDEAFEIFQDMKNCETCDPDSWTFSSLITVYSCSGRVSE 439

Query: 589 AWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
           A      M +AG  P +    S++  + +  Q+ D       +L LG+ P  +    LL+
Sbjct: 440 AEAALLQMREAGFEPTLFVLTSVIQCYGKAKQVDDVVRTFDQVLELGITPDDRFCGCLLN 499

Query: 649 CCTEARSPYDMGF---CHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSED 705
             T+  S  ++G    C E  A   +   + +L     G +G   ++      E++ S  
Sbjct: 500 VMTQTPSE-EIGKLIGCVE-KAKPQNIGQVKMLVEEQNGEEGVFKKETS----ELIDSIG 553

Query: 706 RESKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAVKEKGMSYWLINLHVMSDGT 765
            + K+  ++ ++D        E A  + ++  + ++Y   ++ K  + W ++L  +S G 
Sbjct: 554 SDVKKAYLNCLIDLCVNLNKLERACEILQLGLEYDIY-TGLQSKSATQWSLHLKSLSLGA 612

Query: 766 AVIALSRTLAWFRKQMLISGVG-PSRIDIVTGWGRRSRVTGTSLVRQAVQELLHMFSFPF 824
           A+ AL   +    +  L SG   P  + I TG G+  + +   L     +  L   + PF
Sbjct: 613 ALTALHVWINDLSEAALESGEEFPPLLGINTGHGKH-KYSDKGLA-AVFESHLKELNAPF 670

Query: 825 FTENGNSGCFVGCGEPLNKWL 845
                  G F+        WL
Sbjct: 671 HEAPDKVGWFLTTSVAAKAWL 691



 Score =  100 bits (250), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 74/277 (26%), Positives = 128/277 (46%), Gaps = 12/277 (4%)

Query: 392 QPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMD 451
           Q  VVT N + +       LN  L+  K  + V      + Y   + +  K+  L+ +  
Sbjct: 143 QDAVVTLNNMTNPETAPIVLNNLLETMKPSREV------ILYNVTLKVFRKSKNLEKSEK 196

Query: 452 MYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQA 511
           ++ +M   G+ PD  T++ II+C  ++G  + A + F +M + GC P+ VT   MI    
Sbjct: 197 LFDEMLERGVKPDNATFTTIISCARQSGVPKRAVEWFEKMSSFGCEPDNVTLAAMIDAYG 256

Query: 512 KARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEP 571
           +A N + AL LY   +   +  D VT+S ++ + G  G  D    ++ EM+     P+  
Sbjct: 257 RAGNVEMALSLYDRARTEKWRIDAVTFSTLIRIYGVSGNYDGCLNIYEEMKALGVKPNLV 316

Query: 572 VYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGM 631
           +Y  L+D  G+A    +A   ++ ++  G  PN  T  +L+ A+ R     DA  + + M
Sbjct: 317 IYNRLLDSMGRAKRPWQAKIIHKDLISNGFTPNWSTYAALIRAYGRARYGDDALVIYREM 376

Query: 632 LNLGLKPSLQTYTLLLSCCTEARSPYDMGFCHELMAV 668
              GL  ++  Y  LLS C       D+G+  E   +
Sbjct: 377 KEKGLSLTVILYNTLLSMCA------DIGYVDEAFEI 407



 Score = 74.3 bits (181), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 42/171 (24%), Positives = 79/171 (46%)

Query: 500 LVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFA 559
           ++ YN+ + +  K++N + + KL+ +M   G +PD  T++ ++      G    A   F 
Sbjct: 175 VILYNVTLKVFRKSKNLEKSEKLFDEMLERGVKPDNATFTTIISCARQSGVPKRAVEWFE 234

Query: 560 EMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVG 619
           +M      PD      ++D +G+AGNV  A   Y+       R +  T ++L+  +   G
Sbjct: 235 KMSSFGCEPDNVTLAAMIDAYGRAGNVEMALSLYDRARTEKWRIDAVTFSTLIRIYGVSG 294

Query: 620 QLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGFCHELMAVSG 670
                 ++ + M  LG+KP+L  Y  LL     A+ P+     H+ +  +G
Sbjct: 295 NYDGCLNIYEEMKALGVKPNLVIYNRLLDSMGRAKRPWQAKIIHKDLISNG 345


>gi|53793262|dbj|BAD54485.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
          Length = 713

 Score =  151 bits (382), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 92/331 (27%), Positives = 160/331 (48%), Gaps = 35/331 (10%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           ++ G   D  T+ +++   G+  +   + +L+++M R GC+ +VVTYN LI+ + +   +
Sbjct: 215 KEMGCLPDVVTFNSLIDGYGKCGELDEVEQLVEEMRRSGCKADVVTYNALINCFCKFGRM 274

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
             A   F  M+  G   + VT+ T +D   K G +  AM ++ +M+  G++ + FTY+ +
Sbjct: 275 ETAYGYFAAMKREGVMANVVTFSTFVDAFCKEGLVREAMKLFAQMRVRGMALNEFTYTCL 334

Query: 472 INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKAR----------------- 514
           I+   KAG L  A  L  EMV QG   N+VTY +++    K R                 
Sbjct: 335 IDGTCKAGRLDDAIVLLDEMVRQGVPLNVVTYTVLVDGLCKERKVAEAEDVLRMMEKAGV 394

Query: 515 ------------------NYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEA 556
                             N + AL L  +M+N G E D   Y  +++ L +   LDEA++
Sbjct: 395 RANELLYTTLIHGHFMNKNSEKALGLLSEMKNKGLELDISLYGALIQGLCNVHKLDEAKS 454

Query: 557 VFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFL 616
           +  +M      P+  +Y  ++D   K+G V +A    + +L +G +PNV T  +L+    
Sbjct: 455 LLTKMDESGLEPNYIIYTTMMDACFKSGKVPEAIAMLQKILDSGFQPNVITYCALIDGLC 514

Query: 617 RVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
           + G + +A      M +LGL P++Q YT L+
Sbjct: 515 KAGSIDEAISHFNKMRDLGLDPNVQAYTALV 545



 Score =  137 bits (346), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 93/321 (28%), Positives = 151/321 (47%), Gaps = 12/321 (3%)

Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLI 402
           A+  F  +R + G   +E TYT ++    +A +      LLD+MVR G   NVVTY  L+
Sbjct: 312 AMKLFAQMRVR-GMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPLNVVTYTVLV 370

Query: 403 HSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLS 462
               +   + EA DV + M+  G   + + Y TLI  H      + A+ +  +M+  GL 
Sbjct: 371 DGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEKALGLLSEMKNKGLE 430

Query: 463 PDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKL 522
            D   Y  +I  L     L  A  L  +M   G  PN + Y  M+    K+     A+ +
Sbjct: 431 LDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTMMDACFKSGKVPEAIAM 490

Query: 523 YRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGK 582
            + + ++GF+P+ +TY  +++ L   G +DEA + F +MR     P+   Y  LVD   K
Sbjct: 491 LQKILDSGFQPNVITYCALIDGLCKAGSIDEAISHFNKMRDLGLDPNVQAYTALVDGLCK 550

Query: 583 AGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQT 642
            G + +A + +  M+  G+  +     +LL  +L+ G L DA+ L   M++ GL+  L  
Sbjct: 551 NGCLNEAVQLFNEMVHKGMSLDKVVYTALLDGYLKQGNLHDAFALKAKMIDSGLQLDLFC 610

Query: 643 YTLLLSCCTEARSPYDMGFCH 663
           YT  +S           GFC+
Sbjct: 611 YTCFIS-----------GFCN 620



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 83/278 (29%), Positives = 137/278 (49%), Gaps = 4/278 (1%)

Query: 370 LGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPD 429
           L R R    + +L +Q+      PNV T+N +I    +   L EA  +F +M+ +GC PD
Sbjct: 167 LARDRSGRLVRRLFEQLP----APNVFTFNIVIDFLCKEGELAEARSLFSRMKEMGCLPD 222

Query: 430 RVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFC 489
            VT+ +LID + K G LD    + ++M+ +G   D  TY+ +INC  K G ++ A+  F 
Sbjct: 223 VVTFNSLIDGYGKCGELDEVEQLVEEMRRSGCKADVVTYNALINCFCKFGRMETAYGYFA 282

Query: 490 EMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCG 549
            M  +G + N+VT++  +    K    + A+KL+  M+  G   ++ TY+ +++     G
Sbjct: 283 AMKREGVMANVVTFSTFVDAFCKEGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAG 342

Query: 550 YLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCN 609
            LD+A  +  EM R+    +   Y +LVD   K   V +A +    M +AG+R N     
Sbjct: 343 RLDDAIVLLDEMVRQGVPLNVVTYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELLYT 402

Query: 610 SLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
           +L+           A  LL  M N GL+  +  Y  L+
Sbjct: 403 TLIHGHFMNKNSEKALGLLSEMKNKGLELDISLYGALI 440



 Score =  116 bits (291), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 84/331 (25%), Positives = 144/331 (43%), Gaps = 35/331 (10%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           R++G K D  TY  ++    +  +          M R+G   NVVT++  + ++ +   +
Sbjct: 250 RRSGCKADVVTYNALINCFCKFGRMETAYGYFAAMKREGVMANVVTFSTFVDAFCKEGLV 309

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
            EA+ +F QM+V G   +  TY  LID   KAG LD A+ +  +M   G+  +  TY+V+
Sbjct: 310 REAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPLNVVTYTVL 369

Query: 472 INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQN--- 528
           ++ L K   +  A  +   M   G   N + Y  +I      +N + AL L  +M+N   
Sbjct: 370 VDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEKALGLLSEMKNKGL 429

Query: 529 --------------------------------AGFEPDKVTYSIVMEVLGHCGYLDEAEA 556
                                           +G EP+ + Y+ +M+     G + EA A
Sbjct: 430 ELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTMMDACFKSGKVPEAIA 489

Query: 557 VFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFL 616
           +  ++    + P+   Y  L+D   KAG++ +A   +  M   GL PNV    +L+    
Sbjct: 490 MLQKILDSGFQPNVITYCALIDGLCKAGSIDEAISHFNKMRDLGLDPNVQAYTALVDGLC 549

Query: 617 RVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
           + G L++A  L   M++ G+      YT LL
Sbjct: 550 KNGCLNEAVQLFNEMVHKGMSLDKVVYTALL 580


>gi|255660844|gb|ACU25591.1| pentatricopeptide repeat-containing protein [Rhaphithamnus
           venustus]
          Length = 418

 Score =  151 bits (382), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 91/306 (29%), Positives = 162/306 (52%), Gaps = 1/306 (0%)

Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLI 402
           A+ FF  L R+  F     T   ++  L + + F  +     +++  G   ++  +N L+
Sbjct: 85  AIEFFR-LTREHKFWVPFDTCRKVLEHLMKLKYFKLVWGFYKEILECGYPASLYFFNILM 143

Query: 403 HSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLS 462
           H + +   +  A  VF  +   G  P  V++ TL+  + + G LD    +   M A+G+ 
Sbjct: 144 HRFCKEGEMRLAQSVFDAITKWGLRPSVVSFNTLMSGYIRLGDLDEGFRLKSAMHASGVQ 203

Query: 463 PDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKL 522
           PD +TYSV+IN L K   +  A++LF EM++ G +PN VT+  +I    K      A+++
Sbjct: 204 PDVYTYSVLINGLCKESKMDEANELFNEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEI 263

Query: 523 YRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGK 582
           Y+ + + GF PD +TY+ ++  L   G L +A  +  EM  K   PD+  Y  L+D   K
Sbjct: 264 YKQLLSQGFSPDLITYNTLIFGLCKKGDLKQARDLIDEMSMKELKPDKITYTTLIDGSCK 323

Query: 583 AGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQT 642
            G++  A+E+ + M++  +R +     +L+S   + G+  DA  +L+GML++GLKP   T
Sbjct: 324 EGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLRGMLSVGLKPDNGT 383

Query: 643 YTLLLS 648
           YT++++
Sbjct: 384 YTMIIN 389



 Score =  117 bits (294), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 71/227 (31%), Positives = 118/227 (51%)

Query: 381 KLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIH 440
           +L   M   G QP+V TY+ LI+   + + ++EA ++F +M   G  P+ VT+ TLID H
Sbjct: 192 RLKSAMHASGVQPDVYTYSVLINGLCKESKMDEANELFNEMLDNGLVPNGVTFTTLIDGH 251

Query: 441 AKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNL 500
            K G +D+AM++YK++ + G SPD  TY+ +I  L K G L+ A  L  EM  +   P+ 
Sbjct: 252 CKNGRVDLAMEIYKQLLSQGFSPDLITYNTLIFGLCKKGDLKQARDLIDEMSMKELKPDK 311

Query: 501 VTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAE 560
           +TY  +I    K  + ++A +  + M       D V Y+ ++  L   G   +AE +   
Sbjct: 312 ITYTTLIDGSCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLRG 371

Query: 561 MRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPT 607
           M      PD   Y ++++ + K G+V+   +  + M + G  P V T
Sbjct: 372 MLSVGLKPDNGTYTMIINEFCKKGDVKTGSKLLKEMXRDGHVPCVVT 418


>gi|47550658|dbj|BAD20284.1| hypothetical protein [Oryza sativa Indica Group]
          Length = 791

 Score =  151 bits (382), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 98/350 (28%), Positives = 162/350 (46%), Gaps = 36/350 (10%)

Query: 359 DEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVF 418
           D  TY++++  L + +      ++L  MV++G  PN +TYN ++H Y  +    EA+   
Sbjct: 230 DVVTYSSIIAALCKGQAMDKAMEVLTTMVKNGVMPNCMTYNSILHGYCSSEQPKEAIGFL 289

Query: 419 KQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKA 478
           K+M+  G EPD VTY +L+D   K G    A  ++  M   GL PD  TY  ++      
Sbjct: 290 KKMRSDGVEPDVVTYNSLMDYLCKNGRSTEARKIFDSMTKRGLEPDIATYCTLLQGYATK 349

Query: 479 GHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTY 538
           G L   H L   MV  G  P+   +NI+I   AK      A+ ++  M+  G  P+ VTY
Sbjct: 350 GALVEMHALLDLMVRNGIHPDHHVFNILICAYAKQEKVDEAMLVFSKMRQHGLNPNVVTY 409

Query: 539 SIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLV------DLWGKA--------- 583
             V+ +L   G +D+A   F +M  +   P+  VY  L+      D W KA         
Sbjct: 410 GAVIGILCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHSLCIFDKWDKAEELILEMLD 469

Query: 584 --------------------GNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSD 623
                               G V ++ + ++ M++ G++PNV T ++L+  +   G++ +
Sbjct: 470 RGICLNTIFFNSIIHSHCKEGRVIESEKLFDLMVRIGVKPNVITYSTLIDGYCLAGKMDE 529

Query: 624 AYHLLQGMLNLGLKPSLQTY-TLLLSCCTEARSPYDMGFCHELMAVSGHP 672
           A  LL  M ++G+KP   TY TL+   C  +R    +    E+++    P
Sbjct: 530 ATKLLSSMFSVGMKPDCVTYNTLINGYCRVSRMDDALALFKEMVSSGVSP 579



 Score =  143 bits (360), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 102/418 (24%), Positives = 191/418 (45%), Gaps = 13/418 (3%)

Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLI 402
           A+GF   +R   G + D  TY +++  L +  +     K+ D M + G +P++ TY  L+
Sbjct: 285 AIGFLKKMRSD-GVEPDVVTYNSLMDYLCKNGRSTEARKIFDSMTKRGLEPDIATYCTLL 343

Query: 403 HSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLS 462
             Y     L E   +   M   G  PD   +  LI  +AK   +D AM ++ KM+  GL+
Sbjct: 344 QGYATKGALVEMHALLDLMVRNGIHPDHHVFNILICAYAKQEKVDEAMLVFSKMRQHGLN 403

Query: 463 PDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKL 522
           P+  TY  +I  L K+G +  A   F +M+++G  PN++ Y  +I        +  A +L
Sbjct: 404 PNVVTYGAVIGILCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHSLCIFDKWDKAEEL 463

Query: 523 YRDMQNAGFEPDKVTYSIVMEVLGHC--GYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLW 580
             +M + G   + + ++ ++    HC  G + E+E +F  M R    P+   Y  L+D +
Sbjct: 464 ILEMLDRGICLNTIFFNSIIH--SHCKEGRVIESEKLFDLMVRIGVKPNVITYSTLIDGY 521

Query: 581 GKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSL 640
             AG + +A +   +M   G++P+  T N+L++ + RV ++ DA  L + M++ G+ P++
Sbjct: 522 CLAGKMDEATKLLSSMFSVGMKPDCVTYNTLINGYCRVSRMDDALALFKEMVSSGVSPNI 581

Query: 641 QTYTLLLSCCTEARSPYDMGFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEM 700
            TY ++L      R        +  +  SG    +   ++   G    N+ D      + 
Sbjct: 582 ITYNIILQGLFHTRRTAAAKELYVGITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQN 641

Query: 701 MHSEDRESKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAVKEKGMSYWLINL 758
           +   D + +    + ++  L K G  +EA  ++   +   + P+        YW   L
Sbjct: 642 LCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFVAFSSNGLVPN--------YWTYRL 691



 Score =  128 bits (321), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 89/322 (27%), Positives = 152/322 (47%), Gaps = 4/322 (1%)

Query: 353 QAGFKHDEHTYTTMV-GILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           + GF+ +  T+T ++ G+    R   A++ +L +M    C P+V +   L+      N  
Sbjct: 115 KKGFRVEAITFTPLLKGLCADKRTSDAMDIVLRRMTELSCMPDVFSCTILLKGLCDENRS 174

Query: 412 NEALDVFKQM---QVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTY 468
            EAL++   M   +  G  PD V+Y T+I+   K G  D A   Y +M    +SPD  TY
Sbjct: 175 QEALELLHMMADDRGGGSAPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRRISPDVVTY 234

Query: 469 SVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQN 528
           S II  L K   +  A ++   MV  G +PN +TYN ++     +   + A+   + M++
Sbjct: 235 SSIIAALCKGQAMDKAMEVLTTMVKNGVMPNCMTYNSILHGYCSSEQPKEAIGFLKKMRS 294

Query: 529 AGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRK 588
            G EPD VTY+ +M+ L   G   EA  +F  M ++   PD   Y  L+  +   G + +
Sbjct: 295 DGVEPDVVTYNSLMDYLCKNGRSTEARKIFDSMTKRGLEPDIATYCTLLQGYATKGALVE 354

Query: 589 AWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
                + M++ G+ P+    N L+ A+ +  ++ +A  +   M   GL P++ TY  ++ 
Sbjct: 355 MHALLDLMVRNGIHPDHHVFNILICAYAKQEKVDEAMLVFSKMRQHGLNPNVVTYGAVIG 414

Query: 649 CCTEARSPYDMGFCHELMAVSG 670
              ++ S  D     E M   G
Sbjct: 415 ILCKSGSVDDAMLYFEQMIDEG 436



 Score =  117 bits (294), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 74/295 (25%), Positives = 142/295 (48%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           RQ G   +  TY  ++GIL ++          +QM+ +G  PN++ Y  LIHS    +  
Sbjct: 398 RQHGLNPNVVTYGAVIGILCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHSLCIFDKW 457

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
           ++A ++  +M   G   + + + ++I  H K G +  +  ++  M   G+ P+  TYS +
Sbjct: 458 DKAEELILEMLDRGICLNTIFFNSIIHSHCKEGRVIESEKLFDLMVRIGVKPNVITYSTL 517

Query: 472 INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF 531
           I+    AG +  A +L   M + G  P+ VTYN +I    +      AL L+++M ++G 
Sbjct: 518 IDGYCLAGKMDEATKLLSSMFSVGMKPDCVTYNTLINGYCRVSRMDDALALFKEMVSSGV 577

Query: 532 EPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWE 591
            P+ +TY+I+++ L H      A+ ++  + +     +   Y +++    K     +A  
Sbjct: 578 SPNIITYNIILQGLFHTRRTAAAKELYVGITKSGTQLELSTYNIILHGLCKNNLTDEALR 637

Query: 592 WYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLL 646
            ++ +    L+    T N ++ A L+VG+  +A  L     + GL P+  TY L+
Sbjct: 638 MFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLM 692



 Score =  116 bits (291), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 71/244 (29%), Positives = 127/244 (52%)

Query: 381 KLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIH 440
           KL D MVR G +PNV+TY+ LI  Y  A  ++EA  +   M  VG +PD VTY TLI+ +
Sbjct: 497 KLFDLMVRIGVKPNVITYSTLIDGYCLAGKMDEATKLLSSMFSVGMKPDCVTYNTLINGY 556

Query: 441 AKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNL 500
            +   +D A+ ++K+M ++G+SP+  TY++I+  L       AA +L+  +   G    L
Sbjct: 557 CRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVGITKSGTQLEL 616

Query: 501 VTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAE 560
            TYNI++    K      AL++++++     + +  T++I++  L   G  DEA+ +F  
Sbjct: 617 STYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFVA 676

Query: 561 MRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQ 620
                 VP+   Y L+ +     G + +  + + +M   G   +    N ++   L+ G+
Sbjct: 677 FSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFFSMEDNGCTVDSGMLNFIVRELLQRGE 736

Query: 621 LSDA 624
           ++ A
Sbjct: 737 ITRA 740



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 71/305 (23%), Positives = 130/305 (42%), Gaps = 46/305 (15%)

Query: 449 AMDMYKKMQAAG---LSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYN- 504
           A+  Y +M  AG   ++P   TY ++I C  +AG L         +V +G     +T+  
Sbjct: 68  AVSRYNRMARAGAGKVTPTVHTYGILIGCCCRAGRLDLGFAALGNVVKKGFRVEAITFTP 127

Query: 505 IMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAV-----FA 559
           ++  L A  R   +   + R M      PD  + +I+++  G C      EA+      A
Sbjct: 128 LLKGLCADKRTSDAMDIVLRRMTELSCMPDVFSCTILLK--GLCDENRSQEALELLHMMA 185

Query: 560 EMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVG 619
           + R     PD   Y  +++ + K G+  KA+  Y  ML   + P+V T +S+++A  +  
Sbjct: 186 DDRGGGSAPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQ 245

Query: 620 QLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGFCHELMAVSGHPAHMFLLS 679
            +  A  +L  M+  G+ P+  TY  +L            G+C                 
Sbjct: 246 AMDKAMEVLTTMVKNGVMPNCMTYNSILH-----------GYC----------------- 277

Query: 680 MPSPGPDGQNVRDHVGSFLEMMHSEDRESKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQK 739
             S  P     ++ +G FL+ M S+  E      ++++D+L K+G   EA  +++   ++
Sbjct: 278 -SSEQP-----KEAIG-FLKKMRSDGVEPDVVTYNSLMDYLCKNGRSTEARKIFDSMTKR 330

Query: 740 NVYPD 744
            + PD
Sbjct: 331 GLEPD 335



 Score = 60.5 bits (145), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 38/146 (26%), Positives = 70/146 (47%)

Query: 362 TYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQM 421
           TY  ++  L   R+  A  +L   + + G Q  + TYN ++H   + N  +EAL +F+ +
Sbjct: 583 TYNIILQGLFHTRRTAAAKELYVGITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNL 642

Query: 422 QVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHL 481
            +   + +  T+  +I    K G  D A D++    + GL P+ +TY ++   +   G L
Sbjct: 643 CLTDLQLETRTFNIMIGALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLL 702

Query: 482 QAAHQLFCEMVNQGCIPNLVTYNIMI 507
           +   QLF  M + GC  +    N ++
Sbjct: 703 EELDQLFFSMEDNGCTVDSGMLNFIV 728


>gi|357499681|ref|XP_003620129.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495144|gb|AES76347.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 543

 Score =  151 bits (382), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 88/301 (29%), Positives = 155/301 (51%), Gaps = 1/301 (0%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           GF+ D+  Y T++  L +  +  A   LL ++  +  QPNVV Y+ +I    +  ++N+A
Sbjct: 157 GFQLDQVGYGTLIHGLCKVGETRAALDLLRRVDGNLVQPNVVMYSTIIDGMCKDKHVNDA 216

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
            D++ +M   G  P+ VTY  LI      G L  A+D++ KM    + PD +T++++++ 
Sbjct: 217 FDLYSEMVSKGISPNVVTYSALISGFFTVGQLKDAIDLFNKMILENIKPDVYTFNILVDG 276

Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPD 534
             K G ++    +F  M+ QG  PN+VTY  ++      +    A  +   M   G  PD
Sbjct: 277 FCKDGKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKEVNKAKSILYTMSQRGVNPD 336

Query: 535 KVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYE 594
             +Y+I+++       +DEA  +F EM  K+ +PD   Y  L+D   K G +  A +  +
Sbjct: 337 IQSYNILIDGFCKIKKVDEAMNLFKEMHHKHIIPDVVTYNSLIDGLCKLGKISYALKLVD 396

Query: 595 AMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS-CCTEA 653
            M   G+ P++ T +S+L A  +  Q+  A  LL  + + G++P++ TYT+L+   C   
Sbjct: 397 EMHDRGVPPDIITYSSILDALCKNHQVDKAIALLTKLKDQGIRPNMYTYTILIDGLCKGG 456

Query: 654 R 654
           R
Sbjct: 457 R 457



 Score =  136 bits (342), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 100/369 (27%), Positives = 182/369 (49%), Gaps = 11/369 (2%)

Query: 288 SRHFASTGNVVESVS---RILRQWKWGPLAE--EALGNTNYSMDAYQANQVLKQLQDHTV 342
           S  F +  +VV++ S   R+LRQ    P  E  + LG+   S   +    + +Q++   +
Sbjct: 48  STTFHNNNDVVDAFSLFSRLLRQNPTPPAIEFNKILGSLVKSKHYHTVLSLSQQMEFEGI 107

Query: 343 --ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNR 400
              L  F    +  G+  +  T+TT++  L    Q        D +V  G Q + V Y  
Sbjct: 108 NPVLFHFQHPHQLMGYHPNTITFTTLIKGLCLKGQIHQALLFHDNVVAMGFQLDQVGYGT 167

Query: 401 LIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAG 460
           LIH   +      ALD+ +++     +P+ V Y T+ID   K   ++ A D+Y +M + G
Sbjct: 168 LIHGLCKVGETRAALDLLRRVDGNLVQPNVVMYSTIIDGMCKDKHVNDAFDLYSEMVSKG 227

Query: 461 LSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSAL 520
           +SP+  TYS +I+     G L+ A  LF +M+ +   P++ T+NI++    K    +   
Sbjct: 228 ISPNVVTYSALISGFFTVGQLKDAIDLFNKMILENIKPDVYTFNILVDGFCKDGKMKEGK 287

Query: 521 KLYRDMQNAGFEPDKVTYSIVMEVLGHC--GYLDEAEAVFAEMRRKNWVPDEPVYGLLVD 578
            ++  M   G +P+ VTY  +M+  G+C    +++A+++   M ++   PD   Y +L+D
Sbjct: 288 TVFAMMMKQGIKPNVVTYCSLMD--GYCLVKEVNKAKSILYTMSQRGVNPDIQSYNILID 345

Query: 579 LWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKP 638
            + K   V +A   ++ M    + P+V T NSL+    ++G++S A  L+  M + G+ P
Sbjct: 346 GFCKIKKVDEAMNLFKEMHHKHIIPDVVTYNSLIDGLCKLGKISYALKLVDEMHDRGVPP 405

Query: 639 SLQTYTLLL 647
            + TY+ +L
Sbjct: 406 DIITYSSIL 414



 Score =  132 bits (331), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 79/286 (27%), Positives = 140/286 (48%)

Query: 362 TYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQM 421
           TY+ ++       Q      L ++M+ +  +P+V T+N L+  + +   + E   VF  M
Sbjct: 234 TYSALISGFFTVGQLKDAIDLFNKMILENIKPDVYTFNILVDGFCKDGKMKEGKTVFAMM 293

Query: 422 QVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHL 481
              G +P+ VTYC+L+D +     ++ A  +   M   G++PD  +Y+++I+   K   +
Sbjct: 294 MKQGIKPNVVTYCSLMDGYCLVKEVNKAKSILYTMSQRGVNPDIQSYNILIDGFCKIKKV 353

Query: 482 QAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIV 541
             A  LF EM ++  IP++VTYN +I    K      ALKL  +M + G  PD +TYS +
Sbjct: 354 DEAMNLFKEMHHKHIIPDVVTYNSLIDGLCKLGKISYALKLVDEMHDRGVPPDIITYSSI 413

Query: 542 MEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGL 601
           ++ L     +D+A A+  +++ +   P+   Y +L+D   K G +  A   +E +L  G 
Sbjct: 414 LDALCKNHQVDKAIALLTKLKDQGIRPNMYTYTILIDGLCKGGRLEDAHNIFEDLLVKGY 473

Query: 602 RPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
              V T   ++  F   G   +A  LL  M +    P   TY +++
Sbjct: 474 NITVNTYTVMIHGFCNKGLFDEALALLSKMKDNSCIPDAVTYEIII 519



 Score =  131 bits (329), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 79/302 (26%), Positives = 144/302 (47%), Gaps = 11/302 (3%)

Query: 363 YTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQ 422
           Y+T++  + + +       L  +MV  G  PNVVTY+ LI  +     L +A+D+F +M 
Sbjct: 200 YSTIIDGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFTVGQLKDAIDLFNKMI 259

Query: 423 VVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQ 482
           +   +PD  T+  L+D   K G +     ++  M   G+ P+  TY  +++       + 
Sbjct: 260 LENIKPDVYTFNILVDGFCKDGKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKEVN 319

Query: 483 AAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVM 542
            A  +   M  +G  P++ +YNI+I    K +    A+ L+++M +    PD VTY+ ++
Sbjct: 320 KAKSILYTMSQRGVNPDIQSYNILIDGFCKIKKVDEAMNLFKEMHHKHIIPDVVTYNSLI 379

Query: 543 EVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLR 602
           + L   G +  A  +  EM  +   PD   Y  ++D   K   V KA      +   G+R
Sbjct: 380 DGLCKLGKISYALKLVDEMHDRGVPPDIITYSSILDALCKNHQVDKAIALLTKLKDQGIR 439

Query: 603 PNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGFC 662
           PN+ T   L+    + G+L DA+++ + +L  G   ++ TYT+++            GFC
Sbjct: 440 PNMYTYTILIDGLCKGGRLEDAHNIFEDLLVKGYNITVNTYTVMIH-----------GFC 488

Query: 663 HE 664
           ++
Sbjct: 489 NK 490



 Score =  113 bits (283), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 72/256 (28%), Positives = 129/256 (50%), Gaps = 4/256 (1%)

Query: 347 FNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYG 406
           F  + +Q G K +  TY +++      ++      +L  M + G  P++ +YN LI  + 
Sbjct: 290 FAMMMKQ-GIKPNVVTYCSLMDGYCLVKEVNKAKSILYTMSQRGVNPDIQSYNILIDGFC 348

Query: 407 RANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTF 466
           +   ++EA+++FK+M      PD VTY +LID   K G +  A+ +  +M   G+ PD  
Sbjct: 349 KIKKVDEAMNLFKEMHHKHIIPDVVTYNSLIDGLCKLGKISYALKLVDEMHDRGVPPDII 408

Query: 467 TYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDM 526
           TYS I++ L K   +  A  L  ++ +QG  PN+ TY I+I    K    + A  ++ D+
Sbjct: 409 TYSSILDALCKNHQVDKAIALLTKLKDQGIRPNMYTYTILIDGLCKGGRLEDAHNIFEDL 468

Query: 527 QNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLV-DLWGKAGN 585
              G+     TY++++    + G  DEA A+ ++M+  + +PD   Y +++  L+ K  N
Sbjct: 469 LVKGYNITVNTYTVMIHGFCNKGLFDEALALLSKMKDNSCIPDAVTYEIIIRSLFDKDEN 528

Query: 586 VRKAWEWYEAMLQAGL 601
            +   E    M+  GL
Sbjct: 529 DKA--EKLREMITRGL 542



 Score = 57.8 bits (138), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 42/197 (21%), Positives = 87/197 (44%), Gaps = 16/197 (8%)

Query: 468 YSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDM- 526
           YS I         +  A  LF  ++ Q   P  + +N ++    K+++Y + L L + M 
Sbjct: 44  YSSISTTFHNNNDVVDAFSLFSRLLRQNPTPPAIEFNKILGSLVKSKHYHTVLSLSQQME 103

Query: 527 ---------------QNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEP 571
                          Q  G+ P+ +T++ +++ L   G + +A      +    +  D+ 
Sbjct: 104 FEGINPVLFHFQHPHQLMGYHPNTITFTTLIKGLCLKGQIHQALLFHDNVVAMGFQLDQV 163

Query: 572 VYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGM 631
            YG L+    K G  R A +    +    ++PNV   ++++    +   ++DA+ L   M
Sbjct: 164 GYGTLIHGLCKVGETRAALDLLRRVDGNLVQPNVVMYSTIIDGMCKDKHVNDAFDLYSEM 223

Query: 632 LNLGLKPSLQTYTLLLS 648
           ++ G+ P++ TY+ L+S
Sbjct: 224 VSKGISPNVVTYSALIS 240


>gi|302142099|emb|CBI19302.3| unnamed protein product [Vitis vinifera]
          Length = 609

 Score =  151 bits (382), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 92/297 (30%), Positives = 149/297 (50%), Gaps = 2/297 (0%)

Query: 352 RQAGFKHDEHTYTTMV-GILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANY 410
           R  G K D  TY  ++ GI    R   AI K L+ M   GCQPNV+T+N ++ S      
Sbjct: 109 RNKGSKPDVVTYNVLINGICKEGRLDEAI-KFLNNMPSYGCQPNVITHNIILRSMCSTGR 167

Query: 411 LNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSV 470
             +A  +   M   GC P  VT+  LI+   + G L  A+D+ +KM   G +P++ +Y+ 
Sbjct: 168 WMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNP 227

Query: 471 IINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAG 530
           +++   K   +  A +    MV++GC P++VTYN ++    K      A+++   + + G
Sbjct: 228 LLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKG 287

Query: 531 FEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAW 590
             P  +TY+ V++ L   G  + A  +  EMRRK   PD   Y  LV    + G V +A 
Sbjct: 288 CSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAI 347

Query: 591 EWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
           +++  +   G+RPN  T NS++    +  Q   A   L  M++   KP+  TYT+L+
Sbjct: 348 KFFHDLEGLGIRPNAITYNSIMLGLCKSRQTDRAIDFLAYMISKRCKPTEATYTILI 404



 Score =  138 bits (348), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 83/299 (27%), Positives = 146/299 (48%), Gaps = 1/299 (0%)

Query: 377 GAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTL 436
           G   KLLD+M   G +P+VVTYN LI+   +   L+EA+     M   GC+P+ +T+  +
Sbjct: 99  GQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNII 158

Query: 437 IDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGC 496
           +      G    A  +   M   G SP   T++++IN L + G L  A  +  +M   GC
Sbjct: 159 LRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHGC 218

Query: 497 IPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEA 556
            PN ++YN ++    K +    A++    M + G  PD VTY+ ++  L   G +D A  
Sbjct: 219 TPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVE 278

Query: 557 VFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFL 616
           +  ++  K   P    Y  ++D   K G   +A +  + M + GL+P++ T +SL+S   
Sbjct: 279 ILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLS 338

Query: 617 RVGQLSDAYHLLQGMLNLGLKPSLQTY-TLLLSCCTEARSPYDMGFCHELMAVSGHPAH 674
           R G++ +A      +  LG++P+  TY +++L  C   ++   + F   +++    P  
Sbjct: 339 REGKVDEAIKFFHDLEGLGIRPNAITYNSIMLGLCKSRQTDRAIDFLAYMISKRCKPTE 397



 Score =  130 bits (327), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 69/240 (28%), Positives = 122/240 (50%)

Query: 362 TYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQM 421
           T+  ++  L R    G    +L++M   GC PN ++YN L+H + +   ++ A++    M
Sbjct: 189 TFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIM 248

Query: 422 QVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHL 481
              GC PD VTY TL+    K G +DVA+++  ++ + G SP   TY+ +I+ L K G  
Sbjct: 249 VSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKT 308

Query: 482 QAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIV 541
           + A +L  EM  +G  P+++TY+ +++  ++      A+K + D++  G  P+ +TY+ +
Sbjct: 309 ERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNSI 368

Query: 542 MEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGL 601
           M  L      D A    A M  K   P E  Y +L++     G  ++A +    +   GL
Sbjct: 369 MLGLCKSRQTDRAIDFLAYMISKRCKPTEATYTILIEGIAYEGLAKEALDLLNELCSRGL 428



 Score =  111 bits (278), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 83/320 (25%), Positives = 143/320 (44%), Gaps = 2/320 (0%)

Query: 411 LNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSV 470
           + +A+ +  +M+  G +PD VTY  LI+   K G LD A+     M + G  P+  T+++
Sbjct: 98  VGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNI 157

Query: 471 IINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAG 530
           I+  +   G    A +L  +M+ +GC P++VT+NI+I    +      A+ +   M   G
Sbjct: 158 ILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHG 217

Query: 531 FEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAW 590
             P+ ++Y+ ++        +D A      M  +   PD   Y  L+    K G V  A 
Sbjct: 218 CTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAV 277

Query: 591 EWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCC 650
           E    +   G  P + T N+++    +VG+   A  LL  M   GLKP + TY+ L+S  
Sbjct: 278 EILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGL 337

Query: 651 T-EARSPYDMGFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRESK 709
           + E +    + F H+L  +   P  +   S+   G       D    FL  M S+  +  
Sbjct: 338 SREGKVDEAIKFFHDLEGLGIRPNAITYNSI-MLGLCKSRQTDRAIDFLAYMISKRCKPT 396

Query: 710 RGLVDAVVDFLHKSGLKEEA 729
                 +++ +   GL +EA
Sbjct: 397 EATYTILIEGIAYEGLAKEA 416



 Score = 88.6 bits (218), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 54/190 (28%), Positives = 96/190 (50%), Gaps = 3/190 (1%)

Query: 466 FTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRD 525
           F++ V   C  K   +  A +L  EM N+G  P++VTYN++I    K      A+K   +
Sbjct: 85  FSFYVQTTC--KESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNN 142

Query: 526 MQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGN 585
           M + G +P+ +T++I++  +   G   +AE + ++M RK   P    + +L++   + G 
Sbjct: 143 MPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGL 202

Query: 586 VRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTY-T 644
           + +A +  E M   G  PN  + N LL  F +  ++  A   L  M++ G  P + TY T
Sbjct: 203 LGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNT 262

Query: 645 LLLSCCTEAR 654
           LL + C + +
Sbjct: 263 LLTALCKDGK 272



 Score = 82.0 bits (201), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 45/173 (26%), Positives = 85/173 (49%)

Query: 359 DEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVF 418
           D  TY T++  L +  +     ++L+Q+   GC P ++TYN +I    +      A+ + 
Sbjct: 256 DIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLL 315

Query: 419 KQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKA 478
            +M+  G +PD +TY +L+   ++ G +D A+  +  ++  G+ P+  TY+ I+  L K+
Sbjct: 316 DEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNSIMLGLCKS 375

Query: 479 GHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF 531
                A      M+++ C P   TY I+I   A     + AL L  ++ + G 
Sbjct: 376 RQTDRAIDFLAYMISKRCKPTEATYTILIEGIAYEGLAKEALDLLNELCSRGL 428



 Score = 62.8 bits (151), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 62/263 (23%), Positives = 111/263 (42%), Gaps = 6/263 (2%)

Query: 488 FCEMVNQGCIP--NLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVL 545
            C +  Q   P  +L  ++  +    K      A+KL  +M+N G +PD VTY++++  +
Sbjct: 68  ICCINQQTLFPCFSLSGFSFYVQTTCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGI 127

Query: 546 GHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNV 605
              G LDEA      M      P+   + +++      G    A +    ML+ G  P+V
Sbjct: 128 CKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSV 187

Query: 606 PTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL-SCCTEARSPYDMGFCHE 664
            T N L++   R G L  A  +L+ M   G  P+  +Y  LL   C E +    + +   
Sbjct: 188 VTFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDI 247

Query: 665 LMAVSGHPAHM-FLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRESKRGLVDAVVDFLHKS 723
           +++   +P  + +   + +   DG+   D     L  + S+         + V+D L K 
Sbjct: 248 MVSRGCYPDIVTYNTLLTALCKDGK--VDVAVEILNQLSSKGCSPVLITYNTVIDGLSKV 305

Query: 724 GLKEEAGSVWEVAAQKNVYPDAV 746
           G  E A  + +   +K + PD +
Sbjct: 306 GKTERAIKLLDEMRRKGLKPDII 328



 Score = 55.8 bits (133), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 33/119 (27%), Positives = 57/119 (47%), Gaps = 1/119 (0%)

Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLI 402
           A+   + +RR+ G K D  TY+++V  L R  +     K    +   G +PN +TYN ++
Sbjct: 311 AIKLLDEMRRK-GLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNSIM 369

Query: 403 HSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGL 461
               ++   + A+D    M    C+P   TY  LI+  A  G    A+D+  ++ + GL
Sbjct: 370 LGLCKSRQTDRAIDFLAYMISKRCKPTEATYTILIEGIAYEGLAKEALDLLNELCSRGL 428


>gi|326513138|dbj|BAK06809.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 637

 Score =  151 bits (382), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 73/189 (38%), Positives = 108/189 (57%)

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
           + G   D   Y  +   LG+ +Q   I  L D+M  +G  P++ TYN +I SYGR   ++
Sbjct: 421 EKGVATDVGMYNMVFSALGKLKQVSFITSLFDKMKANGIAPDLFTYNIMISSYGRVGLVD 480

Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
           +A  +F+ M    C+PD +TY +LI+   K G LD A  ++K+MQ  G  PD FTYS++I
Sbjct: 481 KASGLFEDMNASSCKPDVITYNSLINCLGKNGDLDEAHMLFKEMQEKGYGPDVFTYSILI 540

Query: 473 NCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFE 532
            C GK+  +  A  LF +M+ +GCIPN+VTYNI++    +      A K Y  M+  G  
Sbjct: 541 ECFGKSNKVDMACNLFLDMIAEGCIPNVVTYNILLDCLERHGKTAEAHKHYETMKQQGLT 600

Query: 533 PDKVTYSIV 541
           PD +T SI+
Sbjct: 601 PDSITCSIL 609



 Score =  143 bits (361), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 96/335 (28%), Positives = 160/335 (47%), Gaps = 33/335 (9%)

Query: 344 LGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTY----- 398
           L FF+ +  + G   +   Y T++  LG+ +    +  +L +M+  GCQPN  TY     
Sbjct: 276 LSFFDEMVSK-GCALNLIAYNTLIEALGKNKMVDKVIFVLSKMIEGGCQPNQFTYSITLD 334

Query: 399 ----------------------NRLIHSY-----GRANYLNEALDVFKQMQVVGCEPDRV 431
                                 N+ I+SY      ++ +++EA +VF QM       DR 
Sbjct: 335 ILAKEGQLHRLNEVLDICDRYMNKSIYSYLVKSLSKSGHVSEAHNVFCQMWNSYETGDRD 394

Query: 432 TYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEM 491
            + +++++   +G    A+D+   M   G++ D   Y+++ + LGK   +     LF +M
Sbjct: 395 AFVSMLEVLCNSGKTLEAIDLLHMMPEKGVATDVGMYNMVFSALGKLKQVSFITSLFDKM 454

Query: 492 VNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYL 551
              G  P+L TYNIMI+   +      A  L+ DM  +  +PD +TY+ ++  LG  G L
Sbjct: 455 KANGIAPDLFTYNIMISSYGRVGLVDKASGLFEDMNASSCKPDVITYNSLINCLGKNGDL 514

Query: 552 DEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSL 611
           DEA  +F EM+ K + PD   Y +L++ +GK+  V  A   +  M+  G  PNV T N L
Sbjct: 515 DEAHMLFKEMQEKGYGPDVFTYSILIECFGKSNKVDMACNLFLDMIAEGCIPNVVTYNIL 574

Query: 612 LSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLL 646
           L    R G+ ++A+   + M   GL P   T ++L
Sbjct: 575 LDCLERHGKTAEAHKHYETMKQQGLTPDSITCSIL 609



 Score =  123 bits (309), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 116/524 (22%), Positives = 207/524 (39%), Gaps = 102/524 (19%)

Query: 325 MDAYQANQVLKQLQ-DHTVALGFFNWLRRQ-AGFKHDEHTYTTMVGILGRAR-QFGAINK 381
           + A +A++++K L  +  +AL FF +      GF+HD  +Y  ++ +L R R       +
Sbjct: 81  LTASEASEIVKALSPNPALALAFFRFAPASFPGFRHDAFSYNRILALLFRTRADPSEALR 140

Query: 382 LLDQMVRDGCQPNVVTYNRL--------------------------------IHSYGRAN 409
           ++ +M RDG   N+ T N L                                + ++ R+ 
Sbjct: 141 IVSEMERDGVSGNISTVNLLVGIGGGGVEVTKCLELAMKWGLRLNGYTYKCILQAHLRSR 200

Query: 410 YLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYS 469
            +++  +V+++M+  G   D   Y  L+D  AK+G +D A  +++ M+     PD +TY+
Sbjct: 201 EVSKGFEVYEEMRRKGYMLDIFGYNMLLDALAKSGMVDQAYQVFEDMKQKYCEPDAYTYT 260

Query: 470 VIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNA 529
           ++I   G+AG        F EMV++GC  NL+ YN +I    K +     + +   M   
Sbjct: 261 ILIRMSGRAGKASKFLSFFDEMVSKGCALNLIAYNTLIEALGKNKMVDKVIFVLSKMIEG 320

Query: 530 GFEPDKVTYSIVM-------------EVLGHC-------------------GYLDEAEAV 557
           G +P++ TYSI +             EVL  C                   G++ EA  V
Sbjct: 321 GCQPNQFTYSITLDILAKEGQLHRLNEVLDICDRYMNKSIYSYLVKSLSKSGHVSEAHNV 380

Query: 558 FAEM-----------------------------------RRKNWVPDEPVYGLLVDLWGK 582
           F +M                                     K    D  +Y ++    GK
Sbjct: 381 FCQMWNSYETGDRDAFVSMLEVLCNSGKTLEAIDLLHMMPEKGVATDVGMYNMVFSALGK 440

Query: 583 AGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQT 642
              V      ++ M   G+ P++ T N ++S++ RVG +  A  L + M     KP + T
Sbjct: 441 LKQVSFITSLFDKMKANGIAPDLFTYNIMISSYGRVGLVDKASGLFEDMNASSCKPDVIT 500

Query: 643 YTLLLSCCTEARSPYDMGFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMH 702
           Y  L++C  +     +     + M   G+   +F  S+        N  D   +    M 
Sbjct: 501 YNSLINCLGKNGDLDEAHMLFKEMQEKGYGPDVFTYSILIECFGKSNKVDMACNLFLDMI 560

Query: 703 SEDRESKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAV 746
           +E         + ++D L + G   EA   +E   Q+ + PD++
Sbjct: 561 AEGCIPNVVTYNILLDCLERHGKTAEAHKHYETMKQQGLTPDSI 604



 Score =  103 bits (258), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 56/181 (30%), Positives = 98/181 (54%), Gaps = 1/181 (0%)

Query: 334 LKQLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQP 393
           L +L+  +     F+ ++   G   D  TY  M+   GR       + L + M    C+P
Sbjct: 438 LGKLKQVSFITSLFDKMKAN-GIAPDLFTYNIMISSYGRVGLVDKASGLFEDMNASSCKP 496

Query: 394 NVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMY 453
           +V+TYN LI+  G+   L+EA  +FK+MQ  G  PD  TY  LI+   K+  +D+A +++
Sbjct: 497 DVITYNSLINCLGKNGDLDEAHMLFKEMQEKGYGPDVFTYSILIECFGKSNKVDMACNLF 556

Query: 454 KKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKA 513
             M A G  P+  TY+++++CL + G    AH+ +  M  QG  P+ +T +I+  L++++
Sbjct: 557 LDMIAEGCIPNVVTYNILLDCLERHGKTAEAHKHYETMKQQGLTPDSITCSILERLESRS 616

Query: 514 R 514
           +
Sbjct: 617 Q 617


>gi|240255936|ref|NP_193372.6| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|374095491|sp|Q8GWE0.3|PP314_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At4g16390, chloroplastic; AltName: Full=Chloroplastic
           RNA-binding protein P67; Flags: Precursor
 gi|332658341|gb|AEE83741.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 702

 Score =  151 bits (382), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 123/524 (23%), Positives = 238/524 (45%), Gaps = 25/524 (4%)

Query: 332 QVLKQLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLD---QMVR 388
           +V ++ +D   +   F+ +  + G K D  T+TT++     ARQ G   + ++   +M  
Sbjct: 183 KVFRKSKDLEKSEKLFDEMLER-GIKPDNATFTTIISC---ARQNGVPKRAVEWFEKMSS 238

Query: 389 DGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDV 448
            GC+P+ VT   +I +YGRA  ++ AL ++ + +      D VT+ TLI I+  +G  D 
Sbjct: 239 FGCEPDNVTMAAMIDAYGRAGNVDMALSLYDRARTEKWRIDAVTFSTLIRIYGVSGNYDG 298

Query: 449 AMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIA 508
            +++Y++M+A G+ P+   Y+ +I+ +G+A     A  ++ +++  G  PN  TY  ++ 
Sbjct: 299 CLNIYEEMKALGVKPNLVIYNRLIDSMGRAKRPWQAKIIYKDLITNGFTPNWSTYAALVR 358

Query: 509 LQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRR-KNWV 567
              +AR    AL +YR+M+  G     + Y+ ++ +     Y+DEA  +F +M+  +   
Sbjct: 359 AYGRARYGDDALAIYREMKEKGLSLTVILYNTLLSMCADNRYVDEAFEIFQDMKNCETCD 418

Query: 568 PDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHL 627
           PD   +  L+ ++  +G V +A      M +AG  P +    S++  + +  Q+ D    
Sbjct: 419 PDSWTFSSLITVYACSGRVSEAEAALLQMREAGFEPTLFVLTSVIQCYGKAKQVDDVVRT 478

Query: 628 LQGMLNLGLKPSLQTYTLLLSCCTEARSPYD---MGFCHELMAVSGHPAHMFLLSMPSPG 684
              +L LG+ P  +    LL+  T+  S      +G   +     G    M +       
Sbjct: 479 FDQVLELGITPDDRFCGCLLNVMTQTPSEEIGKLIGCVEKAKPKLGQVVKMLV------- 531

Query: 685 PDGQNVRDHV--GSFLEMMHSEDRESKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVY 742
            + QN  + V      E++ S   + K+  ++ ++D        E A  + ++  + ++Y
Sbjct: 532 -EEQNCEEGVFKKEASELIDSIGSDVKKAYLNCLIDLCVNLNKLERACEILQLGLEYDIY 590

Query: 743 PDAVKEKGMSYWLINLHVMSDGTAVIALSRTLAWFRKQMLISGVG-PSRIDIVTGWGRRS 801
              ++ K  + W ++L  +S G A+ AL   +    +  L SG   P  + I TG G+  
Sbjct: 591 -TGLQSKSATQWSLHLKSLSLGAALTALHVWMNDLSEAALESGEEFPPLLGINTGHGKH- 648

Query: 802 RVTGTSLVRQAVQELLHMFSFPFFTENGNSGCFVGCGEPLNKWL 845
           + +   L     +  L   + PF       G F+        WL
Sbjct: 649 KYSDKGLA-AVFESHLKELNAPFHEAPDKVGWFLTTSVAAKAWL 691



 Score =  101 bits (252), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 75/294 (25%), Positives = 134/294 (45%), Gaps = 16/294 (5%)

Query: 375 QFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQ------------ 422
           ++ ++ KL + +  D C+PN      +I  +G   +  +A+     M             
Sbjct: 108 RYSSLIKLAESL--DACKPNEADVCDVITGFGGKLFEQDAVVTLNNMTNPETAPLVLNNL 165

Query: 423 VVGCEPDR--VTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGH 480
           +   +P R  + Y   + +  K+  L+ +  ++ +M   G+ PD  T++ II+C  + G 
Sbjct: 166 LETMKPSREVILYNVTMKVFRKSKDLEKSEKLFDEMLERGIKPDNATFTTIISCARQNGV 225

Query: 481 LQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSI 540
            + A + F +M + GC P+ VT   MI    +A N   AL LY   +   +  D VT+S 
Sbjct: 226 PKRAVEWFEKMSSFGCEPDNVTMAAMIDAYGRAGNVDMALSLYDRARTEKWRIDAVTFST 285

Query: 541 VMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAG 600
           ++ + G  G  D    ++ EM+     P+  +Y  L+D  G+A    +A   Y+ ++  G
Sbjct: 286 LIRIYGVSGNYDGCLNIYEEMKALGVKPNLVIYNRLIDSMGRAKRPWQAKIIYKDLITNG 345

Query: 601 LRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEAR 654
             PN  T  +L+ A+ R     DA  + + M   GL  ++  Y  LLS C + R
Sbjct: 346 FTPNWSTYAALVRAYGRARYGDDALAIYREMKEKGLSLTVILYNTLLSMCADNR 399



 Score = 68.6 bits (166), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 39/171 (22%), Positives = 79/171 (46%)

Query: 500 LVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFA 559
           ++ YN+ + +  K+++ + + KL+ +M   G +PD  T++ ++      G    A   F 
Sbjct: 175 VILYNVTMKVFRKSKDLEKSEKLFDEMLERGIKPDNATFTTIISCARQNGVPKRAVEWFE 234

Query: 560 EMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVG 619
           +M      PD      ++D +G+AGNV  A   Y+       R +  T ++L+  +   G
Sbjct: 235 KMSSFGCEPDNVTMAAMIDAYGRAGNVDMALSLYDRARTEKWRIDAVTFSTLIRIYGVSG 294

Query: 620 QLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGFCHELMAVSG 670
                 ++ + M  LG+KP+L  Y  L+     A+ P+     ++ +  +G
Sbjct: 295 NYDGCLNIYEEMKALGVKPNLVIYNRLIDSMGRAKRPWQAKIIYKDLITNG 345


>gi|357114607|ref|XP_003559090.1| PREDICTED: pentatricopeptide repeat-containing protein At1g77360,
           mitochondrial-like [Brachypodium distachyon]
          Length = 486

 Score =  151 bits (382), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 95/326 (29%), Positives = 168/326 (51%), Gaps = 6/326 (1%)

Query: 330 ANQVLKQLQDH-TVALGFFNWLRRQ--AGFKHDEHTYTTMVGILGRARQFGAINKLLDQM 386
           A +VL++L +   +A  FF W R+Q   G  H   +Y T+V  L + RQ+  +  ++  M
Sbjct: 70  AERVLERLDNAGMLAYRFFEWARKQKRGGCNHTIRSYHTVVASLAKIRQYQLMWDVVAIM 129

Query: 387 VRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFL 446
            R+G   NV T+  ++  Y RA   +EA+  F  M+  G  P+   + +L+    K+  +
Sbjct: 130 RREGV-VNVETFGIIMRKYARAQKFDEAVYTFNIMEKYGVVPNLAAFNSLLGALCKSKNV 188

Query: 447 DVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIM 506
             A +++ KM     +PD  TYS+++   GKA +L    +++ EM++ GC P++VTY IM
Sbjct: 189 RKAQEIFDKMNGR-FNPDAKTYSILLEGWGKAPNLPKMREVYSEMLDAGCQPDIVTYGIM 247

Query: 507 IALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNW 566
           +    K    + A+ + +DM + G +P    YS+++   G    +++A A F +M +   
Sbjct: 248 VDSLCKTGRVEEAVLVVQDMSSRGCQPTTFIYSVLVHTYGVEMRIEDAVATFLDMEKDGI 307

Query: 567 VPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYH 626
           VPD  VY  LV  + K      A+   + M   G+ PN  T N +L+  + +G+  +AY 
Sbjct: 308 VPDVVVYNALVTAFCKVKKFENAFRVMDDMEGHGIAPNSRTWNIILNKLISLGKDDEAYR 367

Query: 627 LLQGMLNLGLKPSLQTYTLLLSCCTE 652
           + + M+    +P   TYT+++    E
Sbjct: 368 VFRRMIK-RCQPDSDTYTMMIKMFCE 392



 Score =  138 bits (348), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 76/281 (27%), Positives = 150/281 (53%), Gaps = 2/281 (0%)

Query: 363 YTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQ 422
           + +++G L +++      ++ D+M      P+  TY+ L+  +G+A  L +  +V+ +M 
Sbjct: 175 FNSLLGALCKSKNVRKAQEIFDKM-NGRFNPDAKTYSILLEGWGKAPNLPKMREVYSEML 233

Query: 423 VVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQ 482
             GC+PD VTY  ++D   K G ++ A+ + + M + G  P TF YSV+++  G    ++
Sbjct: 234 DAGCQPDIVTYGIMVDSLCKTGRVEEAVLVVQDMSSRGCQPTTFIYSVLVHTYGVEMRIE 293

Query: 483 AAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVM 542
            A   F +M   G +P++V YN ++    K + +++A ++  DM+  G  P+  T++I++
Sbjct: 294 DAVATFLDMEKDGIVPDVVVYNALVTAFCKVKKFENAFRVMDDMEGHGIAPNSRTWNIIL 353

Query: 543 EVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLR 602
             L   G  DEA  VF  M ++   PD   Y +++ ++ +  NV  A + ++ M      
Sbjct: 354 NKLISLGKDDEAYRVFRRMIKRCQ-PDSDTYTMMIKMFCENDNVEMALKVWKYMRLKQFL 412

Query: 603 PNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTY 643
           P++ T + L++     G++S A  LL+ M+  G++P   T+
Sbjct: 413 PSMHTFSVLINGLCDKGEVSQACVLLEDMIEKGIRPPGSTF 453



 Score =  110 bits (276), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 69/283 (24%), Positives = 132/283 (46%), Gaps = 1/283 (0%)

Query: 356 FKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEAL 415
           F  D  TY+ ++   G+A     + ++  +M+  GCQP++VTY  ++ S  +   + EA+
Sbjct: 202 FNPDAKTYSILLEGWGKAPNLPKMREVYSEMLDAGCQPDIVTYGIMVDSLCKTGRVEEAV 261

Query: 416 DVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCL 475
            V + M   GC+P    Y  L+  +     ++ A+  +  M+  G+ PD   Y+ ++   
Sbjct: 262 LVVQDMSSRGCQPTTFIYSVLVHTYGVEMRIEDAVATFLDMEKDGIVPDVVVYNALVTAF 321

Query: 476 GKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDK 535
            K    + A ++  +M   G  PN  T+NI++           A +++R M     +PD 
Sbjct: 322 CKVKKFENAFRVMDDMEGHGIAPNSRTWNIILNKLISLGKDDEAYRVFRRMIKRC-QPDS 380

Query: 536 VTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEA 595
            TY++++++      ++ A  V+  MR K ++P    + +L++     G V +A    E 
Sbjct: 381 DTYTMMIKMFCENDNVEMALKVWKYMRLKQFLPSMHTFSVLINGLCDKGEVSQACVLLED 440

Query: 596 MLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKP 638
           M++ G+RP   T   L    L+ G+      L+  M  L  +P
Sbjct: 441 MIEKGIRPPGSTFGKLRQLLLKEGRKDVLEFLVDKMKILIQEP 483



 Score =  101 bits (252), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 66/231 (28%), Positives = 113/231 (48%), Gaps = 1/231 (0%)

Query: 354 AGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNE 413
           AG + D  TY  MV  L +  +      ++  M   GCQP    Y+ L+H+YG    + +
Sbjct: 235 AGCQPDIVTYGIMVDSLCKTGRVEEAVLVVQDMSSRGCQPTTFIYSVLVHTYGVEMRIED 294

Query: 414 ALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIIN 473
           A+  F  M+  G  PD V Y  L+    K    + A  +   M+  G++P++ T+++I+N
Sbjct: 295 AVATFLDMEKDGIVPDVVVYNALVTAFCKVKKFENAFRVMDDMEGHGIAPNSRTWNIILN 354

Query: 474 CLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEP 533
            L   G    A+++F  M+ + C P+  TY +MI +  +  N + ALK+++ M+   F P
Sbjct: 355 KLISLGKDDEAYRVFRRMIKR-CQPDSDTYTMMIKMFCENDNVEMALKVWKYMRLKQFLP 413

Query: 534 DKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAG 584
              T+S+++  L   G + +A  +  +M  K   P    +G L  L  K G
Sbjct: 414 SMHTFSVLINGLCDKGEVSQACVLLEDMIEKGIRPPGSTFGKLRQLLLKEG 464


>gi|308080398|ref|NP_001183938.1| PPR-814a [Zea mays]
 gi|223929924|gb|ACN24620.1| PPR-814a [Zea mays]
          Length = 814

 Score =  151 bits (382), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 87/295 (29%), Positives = 152/295 (51%)

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
           Q G   D  TY+++V  L +AR        L QMV  G  PN  TYN LI+ Y       
Sbjct: 247 QRGIPPDFVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPNNWTYNNLIYGYSSTGQWK 306

Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
           EA+ VFK+M+     PD VT+  L+    K G +  A D++  M   G +PD F+Y++++
Sbjct: 307 EAVRVFKEMRRQSILPDVVTFNMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIML 366

Query: 473 NCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFE 532
           N     G L     LF  M+  G  P + T+N++I   A       A+ ++ +M++ G +
Sbjct: 367 NGYATKGCLVDMTDLFDLMLGDGIAPVICTFNVLIKAYANCGMLDKAMIIFNEMRDHGVK 426

Query: 533 PDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEW 592
           P+ +TY+ V+  L   G +D+A   F +M  +   PD+  Y  L+  +   G++ KA E 
Sbjct: 427 PNVLTYTTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKEL 486

Query: 593 YEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
              ++  G+  ++   +S+++   ++G++ DA ++    +N+GL P+   Y++L+
Sbjct: 487 ISEIMNNGMHLDIVLFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPTAVVYSMLM 541



 Score =  149 bits (375), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 128/493 (25%), Positives = 231/493 (46%), Gaps = 42/493 (8%)

Query: 342 VALGFFNWLRRQAGFKHDEHTYTTMV-GILGRARQFGAINKLLDQMVRDGCQPNVVTYNR 400
           +AL FF  L R  G + D      ++ G     R   A++ LL +    GC P+V +Y+ 
Sbjct: 129 LALAFFGQLLR-TGLRVDIIIANHLLKGFCEAKRTDEALDILLHRTPELGCVPDVFSYSI 187

Query: 401 LIHSYGRANYLNEALDVFKQMQVVG--CEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQA 458
           L+ S        +A D+ + M   G  C PD V Y T+ID   K G ++ A D++K+M  
Sbjct: 188 LLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYNTVIDGFFKEGDVNKACDLFKEMVQ 247

Query: 459 AGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQS 518
            G+ PD  TYS +++ L KA  +  A     +MVN+G +PN  TYN +I   +    ++ 
Sbjct: 248 RGIPPDFVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPNNWTYNNLIYGYSSTGQWKE 307

Query: 519 ALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVD 578
           A++++++M+     PD VT++++M  L   G + EA  VF  M  K   PD   Y ++++
Sbjct: 308 AVRVFKEMRRQSILPDVVTFNMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLN 367

Query: 579 LWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKP 638
            +   G +    + ++ ML  G+ P + T N L+ A+   G L  A  +   M + G+KP
Sbjct: 368 GYATKGCLVDMTDLFDLMLGDGIAPVICTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKP 427

Query: 639 SLQTYTLLLSC-CTEARSPYDMGFCHELM----AVSGHPAHMFLLSMPSPGPDGQNVRDH 693
           ++ TYT +++  C   +    M   ++++    A   +  H  +          Q    H
Sbjct: 428 NVLTYTTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLI----------QGFCTH 477

Query: 694 VGSFLEMMHSEDRESKRG------LVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAVK 747
            GS L+           G      L  ++++ L K G   +A +++++     ++P AV 
Sbjct: 478 -GSLLKAKELISEIMNNGMHLDIVLFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPTAVV 536

Query: 748 EKGMSYWLINLHVMSDGTAVIA-LSRTLAWFRKQMLISGVGPSRI---DIVTGWGRRSRV 803
                       ++ DG  ++  + + L  F   M+ +G+ P+ +    +V G+ +  R+
Sbjct: 537 ----------YSMLMDGYCLVGKMEKALRVF-DAMVSAGIEPNDVVYGTLVNGYCKIGRI 585

Query: 804 -TGTSLVRQAVQE 815
             G SL R+ +Q+
Sbjct: 586 DEGLSLFREMLQK 598



 Score =  142 bits (358), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 85/311 (27%), Positives = 153/311 (49%), Gaps = 1/311 (0%)

Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLI 402
           A+  F  +RRQ+    D  T+  ++G L +  +      + D M   G  P+V +YN ++
Sbjct: 308 AVRVFKEMRRQSILP-DVVTFNMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIML 366

Query: 403 HSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLS 462
           + Y     L +  D+F  M   G  P   T+  LI  +A  G LD AM ++ +M+  G+ 
Sbjct: 367 NGYATKGCLVDMTDLFDLMLGDGIAPVICTFNVLIKAYANCGMLDKAMIIFNEMRDHGVK 426

Query: 463 PDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKL 522
           P+  TY+ +I  L + G +  A + F +M++QG  P+   Y+ +I       +   A +L
Sbjct: 427 PNVLTYTTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKEL 486

Query: 523 YRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGK 582
             ++ N G   D V +S ++  L   G + +A+ +F         P   VY +L+D +  
Sbjct: 487 ISEIMNNGMHLDIVLFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPTAVVYSMLMDGYCL 546

Query: 583 AGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQT 642
            G + KA   ++AM+ AG+ PN     +L++ + ++G++ +   L + ML  G+KPS   
Sbjct: 547 VGKMEKALRVFDAMVSAGIEPNDVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTIL 606

Query: 643 YTLLLSCCTEA 653
           Y +++    EA
Sbjct: 607 YNIIIDGLFEA 617



 Score =  134 bits (338), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 101/376 (26%), Positives = 175/376 (46%), Gaps = 18/376 (4%)

Query: 379 INKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLID 438
           +  L D M+ DG  P + T+N LI +Y     L++A+ +F +M+  G +P+ +TY T+I 
Sbjct: 378 MTDLFDLMLGDGIAPVICTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPNVLTYTTVIA 437

Query: 439 IHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIP 498
              + G +D AM+ + +M   G++PD + Y  +I      G L  A +L  E++N G   
Sbjct: 438 ALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMHL 497

Query: 499 NLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHC--GYLDEAEA 556
           ++V ++ +I    K      A  ++    N G  P  V YS++M+  G+C  G +++A  
Sbjct: 498 DIVLFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPTAVVYSMLMD--GYCLVGKMEKALR 555

Query: 557 VFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFL 616
           VF  M      P++ VYG LV+ + K G + +    +  MLQ G++P+    N ++    
Sbjct: 556 VFDAMVSAGIEPNDVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLF 615

Query: 617 RVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGFC-HELMAVSGHPAHM 675
             G+   A      M   G+  +  TY+++L    + R   +  F   EL A++     +
Sbjct: 616 EAGRTVPAKVKFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDII 675

Query: 676 FLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRESKRGLVDAVVDF------LHKSGLKEEA 729
            L +M +     + V +    F  +       S+ GLV  VV +      L K GL EEA
Sbjct: 676 TLNTMIAGMFQTRRVEEAKDLFASI-------SRSGLVPCVVTYSIMITNLIKEGLVEEA 728

Query: 730 GSVWEVAAQKNVYPDA 745
             ++         PD+
Sbjct: 729 EDMFSSMQNAGCEPDS 744



 Score =  115 bits (289), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 70/270 (25%), Positives = 131/270 (48%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           G   D   +++++  L +  +      + D  V  G  P  V Y+ L+  Y     + +A
Sbjct: 494 GMHLDIVLFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPTAVVYSMLMDGYCLVGKMEKA 553

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
           L VF  M   G EP+ V Y TL++ + K G +D  + ++++M   G+ P T  Y++II+ 
Sbjct: 554 LRVFDAMVSAGIEPNDVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDG 613

Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPD 534
           L +AG    A   F EM   G   N  TY+I++    K R +  A+ L+++++    + D
Sbjct: 614 LFEAGRTVPAKVKFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKID 673

Query: 535 KVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYE 594
            +T + ++  +     ++EA+ +FA + R   VP    Y +++    K G V +A + + 
Sbjct: 674 IITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCVVTYSIMITNLIKEGLVEEAEDMFS 733

Query: 595 AMLQAGLRPNVPTCNSLLSAFLRVGQLSDA 624
           +M  AG  P+    N ++   L+  ++  A
Sbjct: 734 SMQNAGCEPDSRLLNHVVRELLKKNEIVRA 763



 Score =  108 bits (271), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 73/297 (24%), Positives = 144/297 (48%), Gaps = 3/297 (1%)

Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLI 402
           A+  FN +  Q G   D++ Y  ++             +L+ +++ +G   ++V ++ +I
Sbjct: 448 AMEKFNQMIDQ-GVAPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVLFSSII 506

Query: 403 HSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLS 462
           ++  +   + +A ++F     VG  P  V Y  L+D +   G ++ A+ ++  M +AG+ 
Sbjct: 507 NNLCKLGRVMDAQNIFDLTVNVGLHPTAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIE 566

Query: 463 PDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMI-ALQAKARNYQSALK 521
           P+   Y  ++N   K G +     LF EM+ +G  P+ + YNI+I  L    R   + +K
Sbjct: 567 PNDVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVK 626

Query: 522 LYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWG 581
            + +M  +G   +K TYSIV+  L      DEA  +F E+R  N   D      ++    
Sbjct: 627 -FHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMF 685

Query: 582 KAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKP 638
           +   V +A + + ++ ++GL P V T + +++  ++ G + +A  +   M N G +P
Sbjct: 686 QTRRVEEAKDLFASISRSGLVPCVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEP 742



 Score =  100 bits (250), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 78/324 (24%), Positives = 129/324 (39%), Gaps = 71/324 (21%)

Query: 361 HTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQ 420
           HTY  ++    RA +         Q++R G + +++  N L+  +  A   +EALD+   
Sbjct: 112 HTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDIIIANHLLKGFCEAKRTDEALDI--- 168

Query: 421 MQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGH 480
                                          +  +    G  PD F+YS+++  L   G 
Sbjct: 169 -------------------------------LLHRTPELGCVPDVFSYSILLKSLCDQGK 197

Query: 481 LQAAHQLFCEMVNQG--CIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTY 538
              A  L   M   G  C P++V YN +I    K  +   A  L+++M   G  PD VTY
Sbjct: 198 SGQADDLLRMMAEGGAVCSPDVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDFVTY 257

Query: 539 SIVMEVLGHCGYLDEAEA-----------------------------------VFAEMRR 563
           S V+  L     +D+AEA                                   VF EMRR
Sbjct: 258 SSVVHALCKARAMDKAEAFLRQMVNKGVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRR 317

Query: 564 KNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSD 623
           ++ +PD   + +L+    K G +++A + ++ M   G  P+V + N +L+ +   G L D
Sbjct: 318 QSILPDVVTFNMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVD 377

Query: 624 AYHLLQGMLNLGLKPSLQTYTLLL 647
              L   ML  G+ P + T+ +L+
Sbjct: 378 MTDLFDLMLGDGIAPVICTFNVLI 401



 Score = 89.7 bits (221), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 63/250 (25%), Positives = 110/250 (44%), Gaps = 35/250 (14%)

Query: 381 KLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLID-- 438
           ++ D MV  G +PN V Y  L++ Y +   ++E L +F++M   G +P  + Y  +ID  
Sbjct: 555 RVFDAMVSAGIEPNDVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGL 614

Query: 439 ------IHAKAGF---------------------------LDVAMDMYKKMQAAGLSPDT 465
                 + AK  F                            D A+ ++K+++A  +  D 
Sbjct: 615 FEAGRTVPAKVKFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDI 674

Query: 466 FTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRD 525
            T + +I  + +   ++ A  LF  +   G +P +VTY+IMI    K    + A  ++  
Sbjct: 675 ITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCVVTYSIMITNLIKEGLVEEAEDMFSS 734

Query: 526 MQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGN 585
           MQNAG EPD    + V+  L     +  A A  +++  +N+  +     LLVDL+   G 
Sbjct: 735 MQNAGCEPDSRLLNHVVRELLKKNEIVRAGAYLSKIDERNFSLEHLTTMLLVDLFSSKGT 794

Query: 586 VRKAWEWYEA 595
            R+   +  A
Sbjct: 795 CREHIRFLPA 804



 Score = 75.1 bits (183), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 51/190 (26%), Positives = 96/190 (50%), Gaps = 3/190 (1%)

Query: 461 LSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSAL 520
           LSP + TY+++++C  +A   + A   F +++  G   +++  N ++    +A+    AL
Sbjct: 107 LSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDIIIANHLLKGFCEAKRTDEAL 166

Query: 521 K-LYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWV--PDEPVYGLLV 577
             L       G  PD  +YSI+++ L   G   +A+ +   M     V  PD   Y  ++
Sbjct: 167 DILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYNTVI 226

Query: 578 DLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLK 637
           D + K G+V KA + ++ M+Q G+ P+  T +S++ A  +   +  A   L+ M+N G+ 
Sbjct: 227 DGFFKEGDVNKACDLFKEMVQRGIPPDFVTYSSVVHALCKARAMDKAEAFLRQMVNKGVL 286

Query: 638 PSLQTYTLLL 647
           P+  TY  L+
Sbjct: 287 PNNWTYNNLI 296



 Score = 60.5 bits (145), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 40/148 (27%), Positives = 71/148 (47%), Gaps = 2/148 (1%)

Query: 353 QAGFKHDEHTYTTMV-GILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           Q G K     Y  ++ G+    R   A  K   +M   G   N  TY+ ++    +    
Sbjct: 597 QKGIKPSTILYNIIIDGLFEAGRTVPAKVKF-HEMTESGIAMNKCTYSIVLRGLFKNRCF 655

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
           +EA+ +FK+++ +  + D +T  T+I    +   ++ A D++  +  +GL P   TYS++
Sbjct: 656 DEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCVVTYSIM 715

Query: 472 INCLGKAGHLQAAHQLFCEMVNQGCIPN 499
           I  L K G ++ A  +F  M N GC P+
Sbjct: 716 ITNLIKEGLVEEAEDMFSSMQNAGCEPD 743



 Score = 48.9 bits (115), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 30/87 (34%), Positives = 42/87 (48%), Gaps = 1/87 (1%)

Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLI 402
           A+  F  LR     K D  T  TM+  + + R+      L   + R G  P VVTY+ +I
Sbjct: 658 AIFLFKELR-AMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCVVTYSIMI 716

Query: 403 HSYGRANYLNEALDVFKQMQVVGCEPD 429
            +  +   + EA D+F  MQ  GCEPD
Sbjct: 717 TNLIKEGLVEEAEDMFSSMQNAGCEPD 743


>gi|356546522|ref|XP_003541675.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Glycine max]
          Length = 789

 Score =  151 bits (382), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 103/369 (27%), Positives = 170/369 (46%), Gaps = 13/369 (3%)

Query: 297 VVESVSRILR-QWKWGPLAEEALGNTNYSMDAYQANQVLKQLQDHTVALGFFNWLRRQAG 355
           VV  V R++     W P  E  L +   S+       VL+   D  VAL FF W  RQ  
Sbjct: 132 VVREVCRLITLSSAWNPNFEGRLRHLLRSLKPSLVCAVLRSQADERVALNFFYWADRQWR 191

Query: 356 FKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEAL 415
           + H    Y T++ +L + +      ++L  M R G + +   +  ++ SY RA  L  AL
Sbjct: 192 YSHHPLVYYTLLDVLSKTKLCQGARRVLRLMTRRGIELSPEAFGCVMVSYSRAGKLRNAL 251

Query: 416 DVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCL 475
            V   MQ  G EP+     T I +  K   L+ A+   ++MQ  G+ PD  TY+ +I   
Sbjct: 252 RVLTLMQKAGVEPNLSICNTTIYVLVKGCKLEKALRFLERMQVTGIKPDIVTYNSLIKGY 311

Query: 476 GKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDM-QNAGFEPD 534
                ++ A +L   + ++GC P+ V+Y  ++    K +  +    L   M Q++   PD
Sbjct: 312 CDLNRIEDALELIAGLPSKGCPPDKVSYYTVMGFLCKEKKIEQVKCLMEKMVQDSNLIPD 371

Query: 535 KVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYE 594
           +VTY+ ++ +L   G+ D+A A   E   K +  D+  Y  +V  + + G + +A     
Sbjct: 372 QVTYNTLIHMLSKHGHADDALAFLKEAEDKGFHIDKVGYSAIVHSFCQKGRMDEAKSLVI 431

Query: 595 AMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEAR 654
            M      P+V T  +++  F R+G++ +A  +LQ M   G KP+  +YT LL+      
Sbjct: 432 DMYSRSCNPDVVTYTAIVDGFCRLGRIDEAKKMLQQMYKHGCKPNTVSYTALLN------ 485

Query: 655 SPYDMGFCH 663
                G CH
Sbjct: 486 -----GLCH 489



 Score =  120 bits (300), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 85/322 (26%), Positives = 145/322 (45%), Gaps = 2/322 (0%)

Query: 313 LAEEALGNTNYSMDAYQANQVLKQLQDHTVALGFFNWLRR--QAGFKHDEHTYTTMVGIL 370
           L E+ + ++N   D    N ++  L  H  A     +L+     GF  D+  Y+ +V   
Sbjct: 358 LMEKMVQDSNLIPDQVTYNTLIHMLSKHGHADDALAFLKEAEDKGFHIDKVGYSAIVHSF 417

Query: 371 GRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDR 430
            +  +      L+  M    C P+VVTY  ++  + R   ++EA  + +QM   GC+P+ 
Sbjct: 418 CQKGRMDEAKSLVIDMYSRSCNPDVVTYTAIVDGFCRLGRIDEAKKMLQQMYKHGCKPNT 477

Query: 431 VTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCE 490
           V+Y  L++    +G    A +M    +    +P+  TY V+++   + G L  A  L  E
Sbjct: 478 VSYTALLNGLCHSGKSLEAREMINVSEEHWWTPNAITYGVVMHGFRREGKLSEACDLTRE 537

Query: 491 MVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGY 550
           MV +G  P  V  N++I    + +    A K   +  N G   + V ++ V+      G 
Sbjct: 538 MVEKGFFPTPVEINLLIQSLCQNQKVVEAKKYLEECLNKGCAINVVNFTTVIHGFCQIGD 597

Query: 551 LDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNS 610
           ++ A +V  +M   N  PD   Y  L D  GK G + +A E    ML  GL P   T  S
Sbjct: 598 MEAALSVLEDMYLSNKHPDAVTYTALFDALGKKGRLDEAAELIVKMLSKGLDPTPVTFRS 657

Query: 611 LLSAFLRVGQLSDAYHLLQGML 632
           ++  + + G++ D  +LL  M+
Sbjct: 658 VIHRYCQWGRVDDMLNLLDRMV 679


>gi|388513011|gb|AFK44567.1| unknown [Medicago truncatula]
          Length = 348

 Score =  151 bits (382), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 86/301 (28%), Positives = 155/301 (51%), Gaps = 1/301 (0%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           GF  D+ +Y T++  L +  +  A   LL ++     Q N V YN +I+   +  ++N+A
Sbjct: 37  GFHLDQVSYGTLIHGLCKVGETRAALDLLQRVDGKLVQLNAVMYNTVIYGMCKDKHVNDA 96

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
            D++ +M   G  P+ VTY  LI      G L  A+D++ K+    + PD +T++++++ 
Sbjct: 97  FDLYSEMVSKGISPNVVTYSALISGFFVVGKLKDAIDLFNKIILENIKPDGYTFNILVDG 156

Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPD 534
             K   ++    +F  M+ QG IP++VTYN ++      +   +A  ++  M   G  PD
Sbjct: 157 FCKDRKMKEGKTVFAMMMKQGIIPDVVTYNSLVDGYRLVKEVNTAKSIFNTMAQGGVNPD 216

Query: 535 KVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYE 594
             +Y+I++        +D+A  +F EM  KN +P+   Y  L+D   K+G +  A +  +
Sbjct: 217 IRSYNILINGFCKIKKVDKAMNLFNEMHCKNIIPNVVTYNSLIDGLSKSGRISYALQLVD 276

Query: 595 AMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS-CCTEA 653
            M   G+ PN+ T NS++ A  +  Q+  A  L+    + G++PS+ TYT+L+   C   
Sbjct: 277 QMHDRGVPPNILTYNSIIDALFKTHQVDKAIALITKFKDQGIQPSMYTYTILIDGLCKGG 336

Query: 654 R 654
           R
Sbjct: 337 R 337



 Score =  112 bits (281), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 70/261 (26%), Positives = 129/261 (49%), Gaps = 4/261 (1%)

Query: 390 GCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVA 449
           G  PN +T N LI        +++A     ++  +G   D+V+Y TLI    K G    A
Sbjct: 2   GYHPNTITLNTLIKGLCLKGQIHQAFLFHDKLVALGFHLDQVSYGTLIHGLCKVGETRAA 61

Query: 450 MDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIAL 509
           +D+ +++    +  +   Y+ +I  + K  H+  A  L+ EMV++G  PN+VTY+ +I+ 
Sbjct: 62  LDLLQRVDGKLVQLNAVMYNTVIYGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISG 121

Query: 510 QAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCG--YLDEAEAVFAEMRRKNWV 567
                  + A+ L+  +     +PD  T++I+++  G C    + E + VFA M ++  +
Sbjct: 122 FFVVGKLKDAIDLFNKIILENIKPDGYTFNILVD--GFCKDRKMKEGKTVFAMMMKQGII 179

Query: 568 PDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHL 627
           PD   Y  LVD +     V  A   +  M Q G+ P++ + N L++ F ++ ++  A +L
Sbjct: 180 PDVVTYNSLVDGYRLVKEVNTAKSIFNTMAQGGVNPDIRSYNILINGFCKIKKVDKAMNL 239

Query: 628 LQGMLNLGLKPSLQTYTLLLS 648
              M    + P++ TY  L+ 
Sbjct: 240 FNEMHCKNIIPNVVTYNSLID 260



 Score =  108 bits (271), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 67/229 (29%), Positives = 117/229 (51%), Gaps = 4/229 (1%)

Query: 333 VLKQLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQ 392
           V+ +L+D   A+  FN +  +   K D +T+  +V    + R+      +   M++ G  
Sbjct: 124 VVGKLKD---AIDLFNKIILE-NIKPDGYTFNILVDGFCKDRKMKEGKTVFAMMMKQGII 179

Query: 393 PNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDM 452
           P+VVTYN L+  Y     +N A  +F  M   G  PD  +Y  LI+   K   +D AM++
Sbjct: 180 PDVVTYNSLVDGYRLVKEVNTAKSIFNTMAQGGVNPDIRSYNILINGFCKIKKVDKAMNL 239

Query: 453 YKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAK 512
           + +M    + P+  TY+ +I+ L K+G +  A QL  +M ++G  PN++TYN +I    K
Sbjct: 240 FNEMHCKNIIPNVVTYNSLIDGLSKSGRISYALQLVDQMHDRGVPPNILTYNSIIDALFK 299

Query: 513 ARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEM 561
                 A+ L    ++ G +P   TY+I+++ L   G L +A  +F ++
Sbjct: 300 THQVDKAIALITKFKDQGIQPSMYTYTILIDGLCKGGRLKDARNIFEDL 348



 Score =  105 bits (262), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 66/269 (24%), Positives = 124/269 (46%)

Query: 363 YTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQ 422
           Y T++  + + +       L  +MV  G  PNVVTY+ LI  +     L +A+D+F ++ 
Sbjct: 80  YNTVIYGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFVVGKLKDAIDLFNKII 139

Query: 423 VVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQ 482
           +   +PD  T+  L+D   K   +     ++  M   G+ PD  TY+ +++       + 
Sbjct: 140 LENIKPDGYTFNILVDGFCKDRKMKEGKTVFAMMMKQGIIPDVVTYNSLVDGYRLVKEVN 199

Query: 483 AAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVM 542
            A  +F  M   G  P++ +YNI+I    K +    A+ L+ +M      P+ VTY+ ++
Sbjct: 200 TAKSIFNTMAQGGVNPDIRSYNILINGFCKIKKVDKAMNLFNEMHCKNIIPNVVTYNSLI 259

Query: 543 EVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLR 602
           + L   G +  A  +  +M  +   P+   Y  ++D   K   V KA          G++
Sbjct: 260 DGLSKSGRISYALQLVDQMHDRGVPPNILTYNSIIDALFKTHQVDKAIALITKFKDQGIQ 319

Query: 603 PNVPTCNSLLSAFLRVGQLSDAYHLLQGM 631
           P++ T   L+    + G+L DA ++ + +
Sbjct: 320 PSMYTYTILIDGLCKGGRLKDARNIFEDL 348



 Score = 95.5 bits (236), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 65/239 (27%), Positives = 114/239 (47%), Gaps = 11/239 (4%)

Query: 424 VGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQA 483
           +G  P+ +T  TLI      G +  A   + K+ A G   D  +Y  +I+ L K G  +A
Sbjct: 1   MGYHPNTITLNTLIKGLCLKGQIHQAFLFHDKLVALGFHLDQVSYGTLIHGLCKVGETRA 60

Query: 484 AHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVME 543
           A  L   +  +    N V YN +I    K ++   A  LY +M + G  P+ VTYS ++ 
Sbjct: 61  ALDLLQRVDGKLVQLNAVMYNTVIYGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALIS 120

Query: 544 VLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRP 603
                G L +A  +F ++  +N  PD   + +LVD + K   +++    +  M++ G+ P
Sbjct: 121 GFFVVGKLKDAIDLFNKIILENIKPDGYTFNILVDGFCKDRKMKEGKTVFAMMMKQGIIP 180

Query: 604 NVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGFC 662
           +V T NSL+  +  V +++ A  +   M   G+ P +++Y +L++           GFC
Sbjct: 181 DVVTYNSLVDGYRLVKEVNTAKSIFNTMAQGGVNPDIRSYNILIN-----------GFC 228


>gi|356577532|ref|XP_003556878.1| PREDICTED: pentatricopeptide repeat-containing protein At5g04810,
           chloroplastic-like [Glycine max]
          Length = 932

 Score =  151 bits (382), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 88/321 (27%), Positives = 162/321 (50%)

Query: 350 LRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRAN 409
           + + +G KH+  TY+ ++    + + +     + +   +DG +P+VV YN +I ++    
Sbjct: 484 MMKMSGIKHNMKTYSMLINGFLKLKDWANAFSVFEDFTKDGLKPDVVLYNNIITAFCGMG 543

Query: 410 YLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYS 469
            ++ A+ + +QMQ     P   T+  +I   A+AG +  A++++  M+ +G  P   TY+
Sbjct: 544 NMDRAICMVRQMQKERHRPTTRTFLPIIHGFARAGEMRRALEIFDMMRRSGCIPTVHTYN 603

Query: 470 VIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNA 529
            +I  L +   +  A  +  EM   G  PN  TY  ++   A   + + A + +  ++N 
Sbjct: 604 ALILGLVEKRQMTKAVAILDEMNVAGVGPNEHTYTTLMQGYASLGDTEKAFQYFTVLRNE 663

Query: 530 GFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKA 589
           G E D  TY  +++     G +  A AV  EM  KN   +  VY +L+D W + G+V +A
Sbjct: 664 GLEIDVYTYEALLKSCCKSGRMQSALAVTKEMSAKNIPRNTFVYNILIDGWARRGDVWEA 723

Query: 590 WEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSC 649
            +  + M + GL P++ T  S ++A  + G +  A  ++Q M   G+KP+L+TYT L++ 
Sbjct: 724 ADLMQQMRKEGLLPDIHTYTSFINACCKAGDMQKATEIIQEMEASGIKPNLKTYTTLING 783

Query: 650 CTEARSPYDMGFCHELMAVSG 670
              A  P     C E M ++G
Sbjct: 784 WARASMPEKALSCFEEMKLAG 804



 Score =  120 bits (301), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 77/291 (26%), Positives = 127/291 (43%), Gaps = 16/291 (5%)

Query: 362 TYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQM 421
           T+  ++    RA +     ++ D M R GC P V TYN LI        + +A+ +  +M
Sbjct: 566 TFLPIIHGFARAGEMRRALEIFDMMRRSGCIPTVHTYNALILGLVEKRQMTKAVAILDEM 625

Query: 422 QVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHL 481
            V G  P+  TY TL+  +A  G  + A   +  ++  GL  D +TY  ++    K+G +
Sbjct: 626 NVAGVGPNEHTYTTLMQGYASLGDTEKAFQYFTVLRNEGLEIDVYTYEALLKSCCKSGRM 685

Query: 482 QAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIV 541
           Q+A  +  EM  +    N   YNI+I   A+  +   A  L + M+  G  PD  TY+  
Sbjct: 686 QSALAVTKEMSAKNIPRNTFVYNILIDGWARRGDVWEAADLMQQMRKEGLLPDIHTYTSF 745

Query: 542 MEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGL 601
           +      G + +A  +  EM      P+   Y  L++ W +A    KA   +E M  AG 
Sbjct: 746 INACCKAGDMQKATEIIQEMEASGIKPNLKTYTTLINGWARASMPEKALSCFEEMKLAGF 805

Query: 602 RPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTE 652
           +P+    + L+++ L     + +Y                 Y+ LLS C E
Sbjct: 806 KPDKAVYHCLVTSLLSRATFAQSY----------------VYSGLLSVCRE 840



 Score =  112 bits (279), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 68/257 (26%), Positives = 121/257 (47%)

Query: 392 QPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMD 451
           +P    Y  ++  YGR   ++ A   F+ M+  G EP    Y +LI  +A    ++ A+ 
Sbjct: 281 KPARKEYGLMVKYYGRRGDMHHARQTFESMRARGIEPSSHVYSSLIHAYAVGRDMEEALH 340

Query: 452 MYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQA 511
             +KM+  G+     TYS+I+    K G+  AA   F E   +    N V Y  +I    
Sbjct: 341 CVRKMKEEGIEMTIVTYSIIVGGFAKMGNADAADHWFEEAKEKLPSLNAVIYGGIIYAHC 400

Query: 512 KARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEP 571
           +  N   A  L R+M+  G +     Y  +M+     G  ++   VF  ++   + P   
Sbjct: 401 QICNMDRAEALVREMEEQGIDAPIDIYHTMMDGYTMIGNEEKCLIVFDRLKECGFFPSVI 460

Query: 572 VYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGM 631
            YG L++L+ K G V KA E  + M  +G++ N+ T + L++ FL++   ++A+ + +  
Sbjct: 461 SYGCLINLYTKVGKVSKALEISKMMKMSGIKHNMKTYSMLINGFLKLKDWANAFSVFEDF 520

Query: 632 LNLGLKPSLQTYTLLLS 648
              GLKP +  Y  +++
Sbjct: 521 TKDGLKPDVVLYNNIIT 537



 Score =  109 bits (273), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 68/235 (28%), Positives = 116/235 (49%), Gaps = 1/235 (0%)

Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLI 402
           AL  F+ +RR +G     HTY  ++  L   RQ      +LD+M   G  PN  TY  L+
Sbjct: 583 ALEIFDMMRR-SGCIPTVHTYNALILGLVEKRQMTKAVAILDEMNVAGVGPNEHTYTTLM 641

Query: 403 HSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLS 462
             Y       +A   F  ++  G E D  TY  L+    K+G +  A+ + K+M A  + 
Sbjct: 642 QGYASLGDTEKAFQYFTVLRNEGLEIDVYTYEALLKSCCKSGRMQSALAVTKEMSAKNIP 701

Query: 463 PDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKL 522
            +TF Y+++I+   + G +  A  L  +M  +G +P++ TY   I    KA + Q A ++
Sbjct: 702 RNTFVYNILIDGWARRGDVWEAADLMQQMRKEGLLPDIHTYTSFINACCKAGDMQKATEI 761

Query: 523 YRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLV 577
            ++M+ +G +P+  TY+ ++         ++A + F EM+   + PD+ VY  LV
Sbjct: 762 IQEMEASGIKPNLKTYTTLINGWARASMPEKALSCFEEMKLAGFKPDKAVYHCLV 816



 Score =  109 bits (273), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 66/296 (22%), Positives = 142/296 (47%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           ++ G +    TY+ +VG   +     A +   ++        N V Y  +I+++ +   +
Sbjct: 346 KEEGIEMTIVTYSIIVGGFAKMGNADAADHWFEEAKEKLPSLNAVIYGGIIYAHCQICNM 405

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
           + A  + ++M+  G +     Y T++D +   G  +  + ++ +++  G  P   +Y  +
Sbjct: 406 DRAEALVREMEEQGIDAPIDIYHTMMDGYTMIGNEEKCLIVFDRLKECGFFPSVISYGCL 465

Query: 472 INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF 531
           IN   K G +  A ++   M   G   N+ TY+++I    K +++ +A  ++ D    G 
Sbjct: 466 INLYTKVGKVSKALEISKMMKMSGIKHNMKTYSMLINGFLKLKDWANAFSVFEDFTKDGL 525

Query: 532 EPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWE 591
           +PD V Y+ ++      G +D A  +  +M+++   P    +  ++  + +AG +R+A E
Sbjct: 526 KPDVVLYNNIITAFCGMGNMDRAICMVRQMQKERHRPTTRTFLPIIHGFARAGEMRRALE 585

Query: 592 WYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
            ++ M ++G  P V T N+L+   +   Q++ A  +L  M   G+ P+  TYT L+
Sbjct: 586 IFDMMRRSGCIPTVHTYNALILGLVEKRQMTKAVAILDEMNVAGVGPNEHTYTTLM 641



 Score =  109 bits (272), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 86/367 (23%), Positives = 156/367 (42%), Gaps = 8/367 (2%)

Query: 382 LLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHA 441
           L+ +M   G    +  Y+ ++  Y       + L VF +++  G  P  ++Y  LI+++ 
Sbjct: 411 LVREMEEQGIDAPIDIYHTMMDGYTMIGNEEKCLIVFDRLKECGFFPSVISYGCLINLYT 470

Query: 442 KAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLV 501
           K G +  A+++ K M+ +G+  +  TYS++IN   K      A  +F +    G  P++V
Sbjct: 471 KVGKVSKALEISKMMKMSGIKHNMKTYSMLINGFLKLKDWANAFSVFEDFTKDGLKPDVV 530

Query: 502 TYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEM 561
            YN +I       N   A+ + R MQ     P   T+  ++      G +  A  +F  M
Sbjct: 531 LYNNIITAFCGMGNMDRAICMVRQMQKERHRPTTRTFLPIIHGFARAGEMRRALEIFDMM 590

Query: 562 RRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQL 621
           RR   +P    Y  L+    +   + KA    + M  AG+ PN  T  +L+  +  +G  
Sbjct: 591 RRSGCIPTVHTYNALILGLVEKRQMTKAVAILDEMNVAGVGPNEHTYTTLMQGYASLGDT 650

Query: 622 SDAYHLLQGMLNLGLKPSLQTYTLLL-SCCTEARSPYDMGFCHELMAVSGHPAHMFLLSM 680
             A+     + N GL+  + TY  LL SCC   R    +    E M+    P + F+ ++
Sbjct: 651 EKAFQYFTVLRNEGLEIDVYTYEALLKSCCKSGRMQSALAVTKE-MSAKNIPRNTFVYNI 709

Query: 681 PSPGPDGQNVRDHVGSFLEMMHSEDRESKRGLVDAVVDFLH---KSGLKEEAGSVWEVAA 737
                DG   R  V    ++M    +E     +     F++   K+G  ++A  + +   
Sbjct: 710 LI---DGWARRGDVWEAADLMQQMRKEGLLPDIHTYTSFINACCKAGDMQKATEIIQEME 766

Query: 738 QKNVYPD 744
              + P+
Sbjct: 767 ASGIKPN 773



 Score = 93.2 bits (230), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 65/285 (22%), Positives = 128/285 (44%)

Query: 363 YTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQ 422
           Y  MV   GR        +  + M   G +P+   Y+ LIH+Y     + EAL   ++M+
Sbjct: 287 YGLMVKYYGRRGDMHHARQTFESMRARGIEPSSHVYSSLIHAYAVGRDMEEALHCVRKMK 346

Query: 423 VVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQ 482
             G E   VTY  ++   AK G  D A   +++ +    S +   Y  II    +  ++ 
Sbjct: 347 EEGIEMTIVTYSIIVGGFAKMGNADAADHWFEEAKEKLPSLNAVIYGGIIYAHCQICNMD 406

Query: 483 AAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVM 542
            A  L  EM  QG    +  Y+ M+       N +  L ++  ++  GF P  ++Y  ++
Sbjct: 407 RAEALVREMEEQGIDAPIDIYHTMMDGYTMIGNEEKCLIVFDRLKECGFFPSVISYGCLI 466

Query: 543 EVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLR 602
            +    G + +A  +   M+      +   Y +L++ + K  +   A+  +E   + GL+
Sbjct: 467 NLYTKVGKVSKALEISKMMKMSGIKHNMKTYSMLINGFLKLKDWANAFSVFEDFTKDGLK 526

Query: 603 PNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
           P+V   N++++AF  +G +  A  +++ M     +P+ +T+  ++
Sbjct: 527 PDVVLYNNIITAFCGMGNMDRAICMVRQMQKERHRPTTRTFLPII 571


>gi|18071404|gb|AAL58263.1|AC068923_5 putative membrane-associated protein [Oryza sativa Japonica Group]
          Length = 1219

 Score =  151 bits (382), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 91/322 (28%), Positives = 151/322 (46%), Gaps = 35/322 (10%)

Query: 362 TYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQM 421
           TY++++  L +A+      ++L  MV++G  PN  TYN ++H Y  +    EA+   K+M
Sbjct: 236 TYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKM 295

Query: 422 QVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHL 481
              G EPD VTY +L+D   K G    A  M+  M   GL P+  TY  ++      G L
Sbjct: 296 HSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGAL 355

Query: 482 QAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIV 541
              H L   MV  G  PN   ++I+I   AK      A+ ++  M+  G  PD VTY  V
Sbjct: 356 VEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTV 415

Query: 542 MEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLV------DLWGKA------------ 583
           + +L   G +++A   F +M  +   P   VY  L+      D W KA            
Sbjct: 416 IGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGI 475

Query: 584 -----------------GNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYH 626
                            G V ++ + ++ M++ G++P++ T ++L+  +   G++ +A  
Sbjct: 476 CLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATK 535

Query: 627 LLQGMLNLGLKPSLQTYTLLLS 648
           LL  M+++G+KP   TY  L++
Sbjct: 536 LLASMVSVGMKPDCVTYNTLIN 557



 Score =  150 bits (379), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 103/416 (24%), Positives = 193/416 (46%), Gaps = 5/416 (1%)

Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLI 402
           A+GF   +    G + D  TY +++  L +  +     K+ D M + G +P + TY  L+
Sbjct: 288 AIGFLKKMHSD-GVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLL 346

Query: 403 HSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLS 462
             Y     L E   +   M   G  P+   +  LI  +AK G +D AM ++ KM+  GL+
Sbjct: 347 QGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLN 406

Query: 463 PDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKL 522
           PDT TY  +I  L K+G ++ A + F +M+++   P  + YN +I        +  A +L
Sbjct: 407 PDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKEL 466

Query: 523 YRDMQNAGFEPDKVTYSIVMEVLGHC--GYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLW 580
             +M + G   D + ++ +++   HC  G + E+E +F  M R    PD   Y  L+D +
Sbjct: 467 ILEMLDRGICLDTIFFNSIID--SHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGY 524

Query: 581 GKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSL 640
             AG + +A +   +M+  G++P+  T N+L++ + ++ ++ DA  L + M + G+ P +
Sbjct: 525 CLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDI 584

Query: 641 QTYTLLLSCCTEARSPYDMGFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEM 700
            TY ++L    + R        +  +  SG    +   ++   G    N+ D      + 
Sbjct: 585 ITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQN 644

Query: 701 MHSEDRESKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAVKEKGMSYWLI 756
           +   D + +    + ++  L K G  +EA  ++   +   + PD      M+  LI
Sbjct: 645 LCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLI 700



 Score =  147 bits (370), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 96/327 (29%), Positives = 159/327 (48%), Gaps = 4/327 (1%)

Query: 353 QAGFKHDEHTYTTMV-GILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           + GF+ D   +T ++ G+    R   A++ +L +M + GC PNV +YN L+      N  
Sbjct: 119 KKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTQLGCIPNVFSYNILLKGLCDENRS 178

Query: 412 NEALDVFKQMQVVG--CEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYS 469
            EAL++ + M   G  C PD V+Y T+I+   K G LD A   Y +M   G+ P+  TYS
Sbjct: 179 QEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYS 238

Query: 470 VIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNA 529
            II  L KA  +  A ++   MV  G +PN  TYN ++     +   + A+   + M + 
Sbjct: 239 SIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSD 298

Query: 530 GFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKA 589
           G EPD VTY+ +M+ L   G   EA  +F  M ++   P+   YG L+  +   G + + 
Sbjct: 299 GVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEM 358

Query: 590 WEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTY-TLLLS 648
               + M++ G+ PN    + L+ A+ + G++  A  +   M   GL P   TY T++  
Sbjct: 359 HGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGI 418

Query: 649 CCTEARSPYDMGFCHELMAVSGHPAHM 675
            C   R    M +  +++     P ++
Sbjct: 419 LCKSGRVEDAMRYFEQMIDERLSPGNI 445



 Score =  127 bits (318), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 73/244 (29%), Positives = 133/244 (54%)

Query: 381 KLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIH 440
           KL D MVR G +P+++TY+ LI  Y  A  ++EA  +   M  VG +PD VTY TLI+ +
Sbjct: 500 KLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGY 559

Query: 441 AKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNL 500
            K   ++ A+ ++++M+++G+SPD  TY++I+  L +     AA +L+  +   G    L
Sbjct: 560 CKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLEL 619

Query: 501 VTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAE 560
            TYNI++    K      AL++++++     + +  T++I++  L   G  DEA+ +FA 
Sbjct: 620 STYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAA 679

Query: 561 MRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQ 620
           +     VPD   Y L+ +   + G + +  + + +M + G   N    NS++   L+ G 
Sbjct: 680 LSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIVRKLLQRGD 739

Query: 621 LSDA 624
           ++ A
Sbjct: 740 ITRA 743



 Score =  107 bits (266), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 91/359 (25%), Positives = 152/359 (42%), Gaps = 5/359 (1%)

Query: 389 DGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDV 448
           D   PN+ TY  LI S   A  L+        +   G   D + +  L+           
Sbjct: 85  DEVTPNLCTYGILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSD 144

Query: 449 AMDM-YKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQG--CIPNLVTYNI 505
           AMD+  ++M   G  P+ F+Y++++  L      Q A +L   M + G  C P++V+Y  
Sbjct: 145 AMDIVLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTT 204

Query: 506 MIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKN 565
           +I    K  +   A   Y +M + G  P+ VTYS ++  L     +D+A  V   M +  
Sbjct: 205 VINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNG 264

Query: 566 WVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAY 625
            +P+   Y  +V  +  +G  ++A  + + M   G+ P+V T NSL+    + G+ ++A 
Sbjct: 265 VMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEAR 324

Query: 626 HLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGFCHELMAVSG-HPAHMFLLSMPSPG 684
            +   M   GLKP + TY  LL       +  +M    +LM  +G HP H ++ S+    
Sbjct: 325 KMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNH-YVFSILICA 383

Query: 685 PDGQNVRDHVGSFLEMMHSEDRESKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYP 743
              Q   D        M  +           V+  L KSG  E+A   +E    + + P
Sbjct: 384 YAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSP 442


>gi|242067038|ref|XP_002454808.1| hypothetical protein SORBIDRAFT_04g037860 [Sorghum bicolor]
 gi|241934639|gb|EES07784.1| hypothetical protein SORBIDRAFT_04g037860 [Sorghum bicolor]
          Length = 951

 Score =  151 bits (382), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 94/314 (29%), Positives = 158/314 (50%), Gaps = 1/314 (0%)

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
           + G   +  TY T++  L +AR+      LL +MV  G   ++V Y  L+   G+   + 
Sbjct: 320 KIGVAPNHVTYCTLIDSLAKARRGSESLGLLGEMVSRGVVMDLVMYTALMDRLGKEGKIE 379

Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
           EA DV +  Q     P+ VTY  L+D H +AG +D A  +  +M+   + P+  T+S II
Sbjct: 380 EAKDVLRHAQSDNITPNFVTYTVLVDAHCRAGNIDGAEQVLLQMEEKSVIPNVVTFSSII 439

Query: 473 NCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFE 532
           N L K G L  A     +M + G  PN+VTY  +I    K +  ++AL +YRDM + G E
Sbjct: 440 NGLVKRGCLGKAADYMRKMKDSGIAPNVVTYGTLIDGFFKFQGQEAALDVYRDMLHEGVE 499

Query: 533 PDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEW 592
            +      ++  L   G ++ AEA+F +M  +  + D   Y  L+D   K GN+  A++ 
Sbjct: 500 ANNFVVDSLVNGLRKNGNIEGAEALFKDMDERGLLLDHVNYTTLMDGLFKTGNMPAAFKV 559

Query: 593 YEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTY-TLLLSCCT 651
            + +++  L P+    N  ++    +G+ S+A   L+ M N GL+P   TY T++ + C 
Sbjct: 560 GQELMEKNLSPDAVVYNVFINCLCTLGKFSEAKSFLKEMRNTGLEPDQATYNTMIAARCR 619

Query: 652 EARSPYDMGFCHEL 665
           E ++   +    E+
Sbjct: 620 EGKTSKALKLLKEM 633



 Score =  150 bits (378), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 124/452 (27%), Positives = 210/452 (46%), Gaps = 24/452 (5%)

Query: 372 RARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRV 431
           + +   A   ++++M   G   +VV YN L+  +  +   + AL+V ++M+  G EP+ V
Sbjct: 199 KVQDMAAALAVVERMTTQGVALDVVGYNSLVAGFFHSGDADAALEVVERMKADGVEPNVV 258

Query: 432 TYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEM 491
           TY  LI  + K   +D A  +Y+ M  +G+ PD  T S +++ L + G    A+ LF EM
Sbjct: 259 TYTALIGEYCKGKGMDEAFSLYEGMVRSGVLPDVVTLSALVDGLCRDGQFSEAYALFREM 318

Query: 492 VNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYL 551
              G  PN VTY  +I   AKAR    +L L  +M + G   D V Y+ +M+ LG  G +
Sbjct: 319 DKIGVAPNHVTYCTLIDSLAKARRGSESLGLLGEMVSRGVVMDLVMYTALMDRLGKEGKI 378

Query: 552 DEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSL 611
           +EA+ V    +  N  P+   Y +LVD   +AGN+  A +    M +  + PNV T +S+
Sbjct: 379 EEAKDVLRHAQSDNITPNFVTYTVLVDAHCRAGNIDGAEQVLLQMEEKSVIPNVVTFSSI 438

Query: 612 LSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGFCHELMAVSGH 671
           ++  ++ G L  A   ++ M + G+ P++ TY  L+    + +        +  M   G 
Sbjct: 439 INGLVKRGCLGKAADYMRKMKDSGIAPNVVTYGTLIDGFFKFQGQEAALDVYRDMLHEGV 498

Query: 672 PAHMFLL-SMPSPGPDGQNVRDHVGSFLEMMHSEDRESKRGLV------DAVVDFLHKSG 724
            A+ F++ S+ +      N+      F +M        +RGL+        ++D L K+G
Sbjct: 499 EANNFVVDSLVNGLRKNGNIEGAEALFKDM-------DERGLLLDHVNYTTLMDGLFKTG 551

Query: 725 LKEEAGSVWEVAAQKNVYPDAVKEKGMSYWLINLHVMSDGTAVIALSRTLAWFRKQMLIS 784
               A  V +   +KN+ PDAV        L  L   S+  +          F K+M  +
Sbjct: 552 NMPAAFKVGQELMEKNLSPDAVVYNVFINCLCTLGKFSEAKS----------FLKEMRNT 601

Query: 785 GVGPSRIDIVTGWGRRSRVTGTSLVRQAVQEL 816
           G+ P +    T    R R   TS   + ++E+
Sbjct: 602 GLEPDQATYNTMIAARCREGKTSKALKLLKEM 633



 Score =  149 bits (377), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 90/309 (29%), Positives = 151/309 (48%)

Query: 362 TYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQM 421
           TYT +V    RA       ++L QM      PNVVT++ +I+   +   L +A D  ++M
Sbjct: 399 TYTVLVDAHCRAGNIDGAEQVLLQMEEKSVIPNVVTFSSIINGLVKRGCLGKAADYMRKM 458

Query: 422 QVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHL 481
           +  G  P+ VTY TLID   K    + A+D+Y+ M   G+  + F    ++N L K G++
Sbjct: 459 KDSGIAPNVVTYGTLIDGFFKFQGQEAALDVYRDMLHEGVEANNFVVDSLVNGLRKNGNI 518

Query: 482 QAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIV 541
           + A  LF +M  +G + + V Y  ++    K  N  +A K+ +++      PD V Y++ 
Sbjct: 519 EGAEALFKDMDERGLLLDHVNYTTLMDGLFKTGNMPAAFKVGQELMEKNLSPDAVVYNVF 578

Query: 542 MEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGL 601
           +  L   G   EA++   EMR     PD+  Y  ++    + G   KA +  + M +  +
Sbjct: 579 INCLCTLGKFSEAKSFLKEMRNTGLEPDQATYNTMIAARCREGKTSKALKLLKEMKRNSI 638

Query: 602 RPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGF 661
           +PN+ T  +L+   L  G +  A  LL  M + G  P+  T+  +L  C+ +R P  +  
Sbjct: 639 KPNLITYTTLVVGLLEAGVVKKAKFLLNEMASAGFAPTSLTHQRVLQACSGSRRPDVILE 698

Query: 662 CHELMAVSG 670
            HELM  +G
Sbjct: 699 IHELMMGAG 707



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 82/304 (26%), Positives = 151/304 (49%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           R  G + D+ TY TM+    R  +     KLL +M R+  +PN++TY  L+     A  +
Sbjct: 599 RNTGLEPDQATYNTMIAARCREGKTSKALKLLKEMKRNSIKPNLITYTTLVVGLLEAGVV 658

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
            +A  +  +M   G  P  +T+  ++   + +   DV +++++ M  AGL  D   Y+ +
Sbjct: 659 KKAKFLLNEMASAGFAPTSLTHQRVLQACSGSRRPDVILEIHELMMGAGLHADITVYNTL 718

Query: 472 INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF 531
           ++ L   G  + A  +  EM+ +G  P+ +T+N +I    K+ +  +A  +Y  M + G 
Sbjct: 719 VHVLCCHGMARNATVVLDEMLTRGIAPDTITFNALILGHCKSSHLDNAFAIYAQMLHQGL 778

Query: 532 EPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWE 591
            P+  T++ ++  L   G + EA+ V ++M++    P+   Y +LV  + K  N  +A  
Sbjct: 779 SPNIATFNTLLGGLESAGRIGEADTVLSDMKKVGLEPNNLTYDILVTGYAKKSNKVEALR 838

Query: 592 WYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCT 651
            Y  M+  G  P   T NSL+S F + G ++ A  L   M   G+  +  TY +LL+  +
Sbjct: 839 LYCEMVSKGFIPKASTYNSLMSDFAKAGMMNQAKELFSEMKRRGVLHTSSTYDILLNGWS 898

Query: 652 EARS 655
           + R+
Sbjct: 899 KLRN 902



 Score =  134 bits (338), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 83/302 (27%), Positives = 150/302 (49%), Gaps = 1/302 (0%)

Query: 336 QLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNV 395
           ++QD   AL     +  Q G   D   Y ++V     +    A  +++++M  DG +PNV
Sbjct: 199 KVQDMAAALAVVERMTTQ-GVALDVVGYNSLVAGFFHSGDADAALEVVERMKADGVEPNV 257

Query: 396 VTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKK 455
           VTY  LI  Y +   ++EA  +++ M   G  PD VT   L+D   + G    A  ++++
Sbjct: 258 VTYTALIGEYCKGKGMDEAFSLYEGMVRSGVLPDVVTLSALVDGLCRDGQFSEAYALFRE 317

Query: 456 MQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARN 515
           M   G++P+  TY  +I+ L KA     +  L  EMV++G + +LV Y  ++    K   
Sbjct: 318 MDKIGVAPNHVTYCTLIDSLAKARRGSESLGLLGEMVSRGVVMDLVMYTALMDRLGKEGK 377

Query: 516 YQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGL 575
            + A  + R  Q+    P+ VTY+++++     G +D AE V  +M  K+ +P+   +  
Sbjct: 378 IEEAKDVLRHAQSDNITPNFVTYTVLVDAHCRAGNIDGAEQVLLQMEEKSVIPNVVTFSS 437

Query: 576 LVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLG 635
           +++   K G + KA ++   M  +G+ PNV T  +L+  F +      A  + + ML+ G
Sbjct: 438 IINGLVKRGCLGKAADYMRKMKDSGIAPNVVTYGTLIDGFFKFQGQEAALDVYRDMLHEG 497

Query: 636 LK 637
           ++
Sbjct: 498 VE 499



 Score =  132 bits (332), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 81/281 (28%), Positives = 139/281 (49%)

Query: 354 AGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNE 413
           AGF     T+  ++     +R+   I ++ + M+  G   ++  YN L+H          
Sbjct: 671 AGFAPTSLTHQRVLQACSGSRRPDVILEIHELMMGAGLHADITVYNTLVHVLCCHGMARN 730

Query: 414 ALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIIN 473
           A  V  +M   G  PD +T+  LI  H K+  LD A  +Y +M   GLSP+  T++ ++ 
Sbjct: 731 ATVVLDEMLTRGIAPDTITFNALILGHCKSSHLDNAFAIYAQMLHQGLSPNIATFNTLLG 790

Query: 474 CLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEP 533
            L  AG +  A  +  +M   G  PN +TY+I++   AK  N   AL+LY +M + GF P
Sbjct: 791 GLESAGRIGEADTVLSDMKKVGLEPNNLTYDILVTGYAKKSNKVEALRLYCEMVSKGFIP 850

Query: 534 DKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWY 593
              TY+ +M      G +++A+ +F+EM+R+  +     Y +L++ W K  N  +     
Sbjct: 851 KASTYNSLMSDFAKAGMMNQAKELFSEMKRRGVLHTSSTYDILLNGWSKLRNGIEVRILL 910

Query: 594 EAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNL 634
           + M + G +P+  T +S+  AF R G   +A  LL+ +  +
Sbjct: 911 KDMKELGFKPSKGTISSMSRAFSRPGMTGEARRLLKTLFKV 951



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 82/296 (27%), Positives = 142/296 (47%)

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
           + G   D   YTT++  L +     A  K+  +++     P+ V YN  I+        +
Sbjct: 530 ERGLLLDHVNYTTLMDGLFKTGNMPAAFKVGQELMEKNLSPDAVVYNVFINCLCTLGKFS 589

Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
           EA    K+M+  G EPD+ TY T+I    + G    A+ + K+M+   + P+  TY+ ++
Sbjct: 590 EAKSFLKEMRNTGLEPDQATYNTMIAARCREGKTSKALKLLKEMKRNSIKPNLITYTTLV 649

Query: 473 NCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFE 532
             L +AG ++ A  L  EM + G  P  +T+  ++   + +R     L+++  M  AG  
Sbjct: 650 VGLLEAGVVKKAKFLLNEMASAGFAPTSLTHQRVLQACSGSRRPDVILEIHELMMGAGLH 709

Query: 533 PDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEW 592
            D   Y+ ++ VL   G    A  V  EM  +   PD   +  L+    K+ ++  A+  
Sbjct: 710 ADITVYNTLVHVLCCHGMARNATVVLDEMLTRGIAPDTITFNALILGHCKSSHLDNAFAI 769

Query: 593 YEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
           Y  ML  GL PN+ T N+LL      G++ +A  +L  M  +GL+P+  TY +L++
Sbjct: 770 YAQMLHQGLSPNIATFNTLLGGLESAGRIGEADTVLSDMKKVGLEPNNLTYDILVT 825



 Score = 85.5 bits (210), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 71/267 (26%), Positives = 119/267 (44%), Gaps = 6/267 (2%)

Query: 394 NVVTYNRLIHSYGRANYLNEALDVFKQMQVVG----CEPDRVTYCTLIDIHAKAGFLDVA 449
           + +T N +I SY     L  AL + +             D V+Y   +   ++ G   +A
Sbjct: 75  DTLTLNSIILSYCSLRSLRPALSLLRSSSGPQSQSQVAADTVSYNIFLAALSEQGHGRLA 134

Query: 450 MDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNL--VTYNIMI 507
             +  +M   G+S D  T S  +  L + G +  A  L   +V    I  L  V +N +I
Sbjct: 135 PPVLSEMCKRGVSWDGVTVSTALVGLCRTGLVGEAAALAEMLVRGRGIDGLDVVGWNALI 194

Query: 508 ALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWV 567
               K ++  +AL +   M   G   D V Y+ ++    H G  D A  V   M+     
Sbjct: 195 DGYCKVQDMAAALAVVERMTTQGVALDVVGYNSLVAGFFHSGDADAALEVVERMKADGVE 254

Query: 568 PDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHL 627
           P+   Y  L+  + K   + +A+  YE M+++G+ P+V T ++L+    R GQ S+AY L
Sbjct: 255 PNVVTYTALIGEYCKGKGMDEAFSLYEGMVRSGVLPDVVTLSALVDGLCRDGQFSEAYAL 314

Query: 628 LQGMLNLGLKPSLQTYTLLLSCCTEAR 654
            + M  +G+ P+  TY  L+    +AR
Sbjct: 315 FREMDKIGVAPNHVTYCTLIDSLAKAR 341



 Score = 53.1 bits (126), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 71/283 (25%), Positives = 116/283 (40%), Gaps = 37/283 (13%)

Query: 501 VTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAE 560
           V+YNI +A  ++  + + A  +  +M   G   D VT S  +  L   G + EA A+   
Sbjct: 116 VSYNIFLAALSEQGHGRLAPPVLSEMCKRGVSWDGVTVSTALVGLCRTGLVGEAAALAEM 175

Query: 561 MRRKNWVPDEPVYG--LLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRV 618
           + R   +    V G   L+D + K  ++  A    E M   G+  +V   NSL++ F   
Sbjct: 176 LVRGRGIDGLDVVGWNALIDGYCKVQDMAAALAVVERMTTQGVALDVVGYNSLVAGFFHS 235

Query: 619 GQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGFCHELMAVSGHPAHMFLL 678
           G    A  +++ M   G++P++ TYT L+    + +   +    +E M  SG    +  L
Sbjct: 236 GDADAALEVVERMKADGVEPNVVTYTALIGEYCKGKGMDEAFSLYEGMVRSGVLPDVVTL 295

Query: 679 SMPSPG--PDGQ--------NVRDHVG---------SFLEMMHSEDRESK---------- 709
           S    G   DGQ           D +G         + ++ +    R S+          
Sbjct: 296 SALVDGLCRDGQFSEAYALFREMDKIGVAPNHVTYCTLIDSLAKARRGSESLGLLGEMVS 355

Query: 710 RGLV------DAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAV 746
           RG+V       A++D L K G  EEA  V   A   N+ P+ V
Sbjct: 356 RGVVMDLVMYTALMDRLGKEGKIEEAKDVLRHAQSDNITPNFV 398


>gi|449507908|ref|XP_004163164.1| PREDICTED: pentatricopeptide repeat-containing protein At1g51965,
           mitochondrial-like [Cucumis sativus]
          Length = 685

 Score =  151 bits (382), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 70/189 (37%), Positives = 112/189 (59%)

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
           + G   D   Y T++  LG+ +Q   ++ L ++M +DG  P++ TYN LI S GR   + 
Sbjct: 469 EKGISTDTMMYNTVLSTLGKLKQVSHLHDLYEKMKQDGPFPDIFTYNILISSLGRVGKVK 528

Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
           EA++VF++++   C+PD ++Y +LI+   K G +D A   + +MQ  GL+PD  TYS +I
Sbjct: 529 EAVEVFEELESSDCKPDIISYNSLINCLGKNGDVDEAHMRFLEMQDKGLNPDVVTYSTLI 588

Query: 473 NCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFE 532
            C GK   ++ A  LF  M+ QGC PN+VTYNI++    +A      + LY  ++  G  
Sbjct: 589 ECFGKTDKVEMARSLFDRMITQGCCPNIVTYNILLDCLERAGRTAETVDLYAKLREQGLT 648

Query: 533 PDKVTYSIV 541
           PD +TY+I+
Sbjct: 649 PDSITYAIL 657



 Score =  138 bits (347), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 94/366 (25%), Positives = 151/366 (41%), Gaps = 67/366 (18%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           G++ D   Y  ++  L +  Q     K+   M    C P+  TY  +I   G+     E+
Sbjct: 264 GYQLDIFAYNMLLDALAKDEQLDRSYKVFKDMKLKHCNPDEYTYTIMIRMTGKMGRAEES 323

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
           L +F++M   GC P+ + Y T+I   +K+G +D A+ ++  M      P+ FTYS+I+N 
Sbjct: 324 LALFEEMLTKGCTPNLIAYNTMIQALSKSGMVDKAILLFCNMIKNNCRPNEFTYSIILNV 383

Query: 475 --------------------------------LGKAGHLQAAHQLFCEMVN--------- 493
                                           L K GH   AH+LFC M +         
Sbjct: 384 LVAEGQLGRLDEVLEVSNKFINKSIYAYLVRTLSKLGHSSEAHRLFCNMWSFHDGGDRDA 443

Query: 494 --------------------------QGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQ 527
                                     +G   + + YN +++   K +       LY  M+
Sbjct: 444 YISMLESLCRGGKTVEAIELLSKVHEKGISTDTMMYNTVLSTLGKLKQVSHLHDLYEKMK 503

Query: 528 NAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVR 587
             G  PD  TY+I++  LG  G + EA  VF E+   +  PD   Y  L++  GK G+V 
Sbjct: 504 QDGPFPDIFTYNILISSLGRVGKVKEAVEVFEELESSDCKPDIISYNSLINCLGKNGDVD 563

Query: 588 KAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
           +A   +  M   GL P+V T ++L+  F +  ++  A  L   M+  G  P++ TY +LL
Sbjct: 564 EAHMRFLEMQDKGLNPDVVTYSTLIECFGKTDKVEMARSLFDRMITQGCCPNIVTYNILL 623

Query: 648 SCCTEA 653
            C   A
Sbjct: 624 DCLERA 629



 Score =  134 bits (336), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 80/303 (26%), Positives = 152/303 (50%), Gaps = 5/303 (1%)

Query: 344 LGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIH 403
           L F N ++     + +E TY+ ++ +L    Q G ++++L+   +     N   Y  L+ 
Sbjct: 360 LLFCNMIKNNC--RPNEFTYSIILNVLVAEGQLGRLDEVLEVSNK---FINKSIYAYLVR 414

Query: 404 SYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSP 463
           +  +  + +EA  +F  M       DR  Y ++++   + G    A+++  K+   G+S 
Sbjct: 415 TLSKLGHSSEAHRLFCNMWSFHDGGDRDAYISMLESLCRGGKTVEAIELLSKVHEKGIST 474

Query: 464 DTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLY 523
           DT  Y+ +++ LGK   +   H L+ +M   G  P++ TYNI+I+   +    + A++++
Sbjct: 475 DTMMYNTVLSTLGKLKQVSHLHDLYEKMKQDGPFPDIFTYNILISSLGRVGKVKEAVEVF 534

Query: 524 RDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKA 583
            +++++  +PD ++Y+ ++  LG  G +DEA   F EM+ K   PD   Y  L++ +GK 
Sbjct: 535 EELESSDCKPDIISYNSLINCLGKNGDVDEAHMRFLEMQDKGLNPDVVTYSTLIECFGKT 594

Query: 584 GNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTY 643
             V  A   ++ M+  G  PN+ T N LL    R G+ ++   L   +   GL P   TY
Sbjct: 595 DKVEMARSLFDRMITQGCCPNIVTYNILLDCLERAGRTAETVDLYAKLREQGLTPDSITY 654

Query: 644 TLL 646
            +L
Sbjct: 655 AIL 657



 Score =  124 bits (312), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 118/466 (25%), Positives = 207/466 (44%), Gaps = 53/466 (11%)

Query: 324 SMDAYQANQVLKQLQDHTVALGFFNWLRRQA-GFKHDEHTYTTMVGILGRA---RQFGAI 379
           S+   +A+++LK L    +AL FF+        F+HD  TY+ ++ +L  +   ++   +
Sbjct: 127 SLTPAEASEILKSLNSPDLALQFFHRCSSLCPKFRHDAFTYSRILLMLSHSSSSKRIDQV 186

Query: 380 NKLLDQMVRD--------------------------------GCQPNVVTYNRLIHSYGR 407
            ++L QM RD                                  + N  TY  L+ ++ R
Sbjct: 187 REILSQMDRDQIRGTISTVNILIKIFSSNEDLELCTGLIKKWDLRLNAYTYRCLLQAHIR 246

Query: 408 ANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFT 467
           +   + A +V+ +M   G + D   Y  L+D  AK   LD +  ++K M+    +PD +T
Sbjct: 247 SRDSDRAFNVYMEMWSNGYQLDIFAYNMLLDALAKDEQLDRSYKVFKDMKLKHCNPDEYT 306

Query: 468 YSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQ 527
           Y+++I   GK G  + +  LF EM+ +GC PNL+ YN MI   +K+     A+ L+ +M 
Sbjct: 307 YTIMIRMTGKMGRAEESLALFEEMLTKGCTPNLIAYNTMIQALSKSGMVDKAILLFCNMI 366

Query: 528 NAGFEPDKVTYSIVMEVL---GHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAG 584
                P++ TYSI++ VL   G  G LDE   V       N   ++ +Y  LV    K G
Sbjct: 367 KNNCRPNEFTYSIILNVLVAEGQLGRLDEVLEV------SNKFINKSIYAYLVRTLSKLG 420

Query: 585 NVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYT 644
           +  +A   +  M       +     S+L +  R G+  +A  LL  +   G+      Y 
Sbjct: 421 HSSEAHRLFCNMWSFHDGGDRDAYISMLESLCRGGKTVEAIELLSKVHEKGISTDTMMYN 480

Query: 645 LLLSCCTEARSPYDMGFCHELMAVSGHPAHMFL--LSMPSPGPDGQNVRDHVGSFLEMMH 702
            +LS   + +    +   +E M   G    +F   + + S G  G+ V++ V  F E+  
Sbjct: 481 TVLSTLGKLKQVSHLHDLYEKMKQDGPFPDIFTYNILISSLGRVGK-VKEAVEVFEEL-- 537

Query: 703 SEDRESKRGLV--DAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAV 746
            E  + K  ++  +++++ L K+G  +EA   +     K + PD V
Sbjct: 538 -ESSDCKPDIISYNSLINCLGKNGDVDEAHMRFLEMQDKGLNPDVV 582



 Score =  100 bits (250), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 49/160 (30%), Positives = 89/160 (55%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           +Q G   D  TY  ++  LGR  +     ++ +++    C+P++++YN LI+  G+   +
Sbjct: 503 KQDGPFPDIFTYNILISSLGRVGKVKEAVEVFEELESSDCKPDIISYNSLINCLGKNGDV 562

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
           +EA   F +MQ  G  PD VTY TLI+   K   +++A  ++ +M   G  P+  TY+++
Sbjct: 563 DEAHMRFLEMQDKGLNPDVVTYSTLIECFGKTDKVEMARSLFDRMITQGCCPNIVTYNIL 622

Query: 472 INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQA 511
           ++CL +AG       L+ ++  QG  P+ +TY I+  LQ+
Sbjct: 623 LDCLERAGRTAETVDLYAKLREQGLTPDSITYAILDRLQS 662


>gi|449465242|ref|XP_004150337.1| PREDICTED: pentatricopeptide repeat-containing protein At1g51965,
           mitochondrial-like [Cucumis sativus]
          Length = 690

 Score =  151 bits (382), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 70/189 (37%), Positives = 112/189 (59%)

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
           + G   D   Y T++  LG+ +Q   ++ L ++M +DG  P++ TYN LI S GR   + 
Sbjct: 474 EKGISTDTMMYNTVLSTLGKLKQVSHLHDLYEKMKQDGPFPDIFTYNILISSLGRVGKVK 533

Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
           EA++VF++++   C+PD ++Y +LI+   K G +D A   + +MQ  GL+PD  TYS +I
Sbjct: 534 EAVEVFEELESSDCKPDIISYNSLINCLGKNGDVDEAHMRFLEMQDKGLNPDVVTYSTLI 593

Query: 473 NCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFE 532
            C GK   ++ A  LF  M+ QGC PN+VTYNI++    +A      + LY  ++  G  
Sbjct: 594 ECFGKTDKVEMARSLFDRMITQGCCPNIVTYNILLDCLERAGRTAETVDLYAKLREQGLT 653

Query: 533 PDKVTYSIV 541
           PD +TY+I+
Sbjct: 654 PDSITYAIL 662



 Score =  138 bits (347), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 94/366 (25%), Positives = 151/366 (41%), Gaps = 67/366 (18%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           G++ D   Y  ++  L +  Q     K+   M    C P+  TY  +I   G+     E+
Sbjct: 269 GYQLDIFAYNMLLDALAKDEQLDRSYKVFKDMKLKHCNPDEYTYTIMIRMTGKMGRAEES 328

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
           L +F++M   GC P+ + Y T+I   +K+G +D A+ ++  M      P+ FTYS+I+N 
Sbjct: 329 LALFEEMLTKGCTPNLIAYNTMIQALSKSGMVDKAILLFCNMIKNNCRPNEFTYSIILNV 388

Query: 475 --------------------------------LGKAGHLQAAHQLFCEMVN--------- 493
                                           L K GH   AH+LFC M +         
Sbjct: 389 LVAEGQLGRLDEVLEVSNKFINKSIYAYLVRTLSKLGHSSEAHRLFCNMWSFHDGGDRDA 448

Query: 494 --------------------------QGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQ 527
                                     +G   + + YN +++   K +       LY  M+
Sbjct: 449 YISMLESLCRGGKTVEAIELLSKVHEKGISTDTMMYNTVLSTLGKLKQVSHLHDLYEKMK 508

Query: 528 NAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVR 587
             G  PD  TY+I++  LG  G + EA  VF E+   +  PD   Y  L++  GK G+V 
Sbjct: 509 QDGPFPDIFTYNILISSLGRVGKVKEAVEVFEELESSDCKPDIISYNSLINCLGKNGDVD 568

Query: 588 KAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
           +A   +  M   GL P+V T ++L+  F +  ++  A  L   M+  G  P++ TY +LL
Sbjct: 569 EAHMRFLEMQDKGLNPDVVTYSTLIECFGKTDKVEMARSLFDRMITQGCCPNIVTYNILL 628

Query: 648 SCCTEA 653
            C   A
Sbjct: 629 DCLERA 634



 Score =  133 bits (334), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 80/303 (26%), Positives = 152/303 (50%), Gaps = 5/303 (1%)

Query: 344 LGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIH 403
           L F N ++     + +E TY+ ++ +L    Q G ++++L+   +     N   Y  L+ 
Sbjct: 365 LLFCNMIKNNC--RPNEFTYSIILNVLVAEGQLGRLDEVLEVSNK---FINKSIYAYLVR 419

Query: 404 SYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSP 463
           +  +  + +EA  +F  M       DR  Y ++++   + G    A+++  K+   G+S 
Sbjct: 420 TLSKLGHSSEAHRLFCNMWSFHDGGDRDAYISMLESLCRGGKTVEAIELLSKVHEKGIST 479

Query: 464 DTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLY 523
           DT  Y+ +++ LGK   +   H L+ +M   G  P++ TYNI+I+   +    + A++++
Sbjct: 480 DTMMYNTVLSTLGKLKQVSHLHDLYEKMKQDGPFPDIFTYNILISSLGRVGKVKEAVEVF 539

Query: 524 RDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKA 583
            +++++  +PD ++Y+ ++  LG  G +DEA   F EM+ K   PD   Y  L++ +GK 
Sbjct: 540 EELESSDCKPDIISYNSLINCLGKNGDVDEAHMRFLEMQDKGLNPDVVTYSTLIECFGKT 599

Query: 584 GNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTY 643
             V  A   ++ M+  G  PN+ T N LL    R G+ ++   L   +   GL P   TY
Sbjct: 600 DKVEMARSLFDRMITQGCCPNIVTYNILLDCLERAGRTAETVDLYAKLREQGLTPDSITY 659

Query: 644 TLL 646
            +L
Sbjct: 660 AIL 662



 Score =  125 bits (314), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 118/466 (25%), Positives = 207/466 (44%), Gaps = 53/466 (11%)

Query: 324 SMDAYQANQVLKQLQDHTVALGFFNWLRRQA-GFKHDEHTYTTMVGILGRA---RQFGAI 379
           S+   +A+++LK L    +AL FF+        F+HD  TY+ ++ +L  +   ++   +
Sbjct: 132 SLTPAEASEILKSLNSPDLALQFFHRCSSLCPKFRHDAFTYSRILLMLSHSSSSKRIDQV 191

Query: 380 NKLLDQMVRD--------------------------------GCQPNVVTYNRLIHSYGR 407
            ++L QM RD                                  + N  TY  L+ ++ R
Sbjct: 192 REILSQMDRDQIRGTISTVNILIKIFSSNEDLELCTGLIKKWDLRLNAYTYRCLLQAHIR 251

Query: 408 ANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFT 467
           +   + A +V+ +M   G + D   Y  L+D  AK   LD +  ++K M+    +PD +T
Sbjct: 252 SRDSDRAFNVYMEMWSKGYQLDIFAYNMLLDALAKDEQLDRSYKVFKDMKLKHCNPDEYT 311

Query: 468 YSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQ 527
           Y+++I   GK G  + +  LF EM+ +GC PNL+ YN MI   +K+     A+ L+ +M 
Sbjct: 312 YTIMIRMTGKMGRAEESLALFEEMLTKGCTPNLIAYNTMIQALSKSGMVDKAILLFCNMI 371

Query: 528 NAGFEPDKVTYSIVMEVL---GHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAG 584
                P++ TYSI++ VL   G  G LDE   V       N   ++ +Y  LV    K G
Sbjct: 372 KNNCRPNEFTYSIILNVLVAEGQLGRLDEVLEV------SNKFINKSIYAYLVRTLSKLG 425

Query: 585 NVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYT 644
           +  +A   +  M       +     S+L +  R G+  +A  LL  +   G+      Y 
Sbjct: 426 HSSEAHRLFCNMWSFHDGGDRDAYISMLESLCRGGKTVEAIELLSKVHEKGISTDTMMYN 485

Query: 645 LLLSCCTEARSPYDMGFCHELMAVSGHPAHMFL--LSMPSPGPDGQNVRDHVGSFLEMMH 702
            +LS   + +    +   +E M   G    +F   + + S G  G+ V++ V  F E+  
Sbjct: 486 TVLSTLGKLKQVSHLHDLYEKMKQDGPFPDIFTYNILISSLGRVGK-VKEAVEVFEEL-- 542

Query: 703 SEDRESKRGLV--DAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAV 746
            E  + K  ++  +++++ L K+G  +EA   +     K + PD V
Sbjct: 543 -ESSDCKPDIISYNSLINCLGKNGDVDEAHMRFLEMQDKGLNPDVV 587



 Score =  100 bits (250), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 49/160 (30%), Positives = 89/160 (55%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           +Q G   D  TY  ++  LGR  +     ++ +++    C+P++++YN LI+  G+   +
Sbjct: 508 KQDGPFPDIFTYNILISSLGRVGKVKEAVEVFEELESSDCKPDIISYNSLINCLGKNGDV 567

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
           +EA   F +MQ  G  PD VTY TLI+   K   +++A  ++ +M   G  P+  TY+++
Sbjct: 568 DEAHMRFLEMQDKGLNPDVVTYSTLIECFGKTDKVEMARSLFDRMITQGCCPNIVTYNIL 627

Query: 472 INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQA 511
           ++CL +AG       L+ ++  QG  P+ +TY I+  LQ+
Sbjct: 628 LDCLERAGRTAETVDLYAKLREQGLTPDSITYAILDRLQS 667


>gi|12321310|gb|AAG50731.1|AC079041_24 PPR-repeat protein, putative [Arabidopsis thaliana]
          Length = 690

 Score =  151 bits (382), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 106/402 (26%), Positives = 187/402 (46%), Gaps = 6/402 (1%)

Query: 375 QFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYC 434
           Q    ++LL  ++  G  PNVVT+  LI+ + +   ++ A D+FK M+  G EPD + Y 
Sbjct: 266 QIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYS 325

Query: 435 TLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQ 494
           TLID + KAG L +   ++ +    G+  D   +S  I+   K+G L  A  ++  M+ Q
Sbjct: 326 TLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQ 385

Query: 495 GCIPNLVTYNIMI-ALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDE 553
           G  PN+VTY I+I  L    R Y+ A  +Y  +   G EP  VTYS +++    CG L  
Sbjct: 386 GISPNVVTYTILIKGLCQDGRIYE-AFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRS 444

Query: 554 AEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLS 613
             A++ +M +  + PD  +YG+LVD   K G +  A  +   ML   +R NV   NSL+ 
Sbjct: 445 GFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLID 504

Query: 614 AFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSC-CTEARSPYDMGFCHELMAVSGHP 672
            + R+ +  +A  + + M   G+KP + T+T ++     E R    +     +  +   P
Sbjct: 505 GWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEP 564

Query: 673 AHMFLLSMPSPGPDGQNVRDHVG-SFLEMMHSEDRESKRGLVDAVVDFLHKSGLKEEAGS 731
             +   ++       ++++  +G    ++M      +   + + V+  L K    E+A  
Sbjct: 565 DALAYCTLIDAFC--KHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASK 622

Query: 732 VWEVAAQKNVYPDAVKEKGMSYWLINLHVMSDGTAVIALSRT 773
            +    +  + PD V    M     +L  + +   +  L + 
Sbjct: 623 FFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKV 664



 Score =  129 bits (325), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 85/315 (26%), Positives = 147/315 (46%), Gaps = 4/315 (1%)

Query: 344 LGFFNWLRRQA---GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNR 400
           LG  + L  QA   G K D   +++ + +  ++      + +  +M+  G  PNVVTY  
Sbjct: 337 LGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTI 396

Query: 401 LIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAG 460
           LI    +   + EA  ++ Q+   G EP  VTY +LID   K G L     +Y+ M   G
Sbjct: 397 LIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMG 456

Query: 461 LSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSAL 520
             PD   Y V+++ L K G +  A +   +M+ Q    N+V +N +I    +   +  AL
Sbjct: 457 YPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEAL 516

Query: 521 KLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLW 580
           K++R M   G +PD  T++ VM V    G L+EA  +F  M +    PD   Y  L+D +
Sbjct: 517 KVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAF 576

Query: 581 GKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSL 640
            K        + ++ M +  +  ++  CN ++    +  ++ DA      ++   ++P +
Sbjct: 577 CKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDI 636

Query: 641 QTY-TLLLSCCTEAR 654
            TY T++   C+  R
Sbjct: 637 VTYNTMICGYCSLRR 651



 Score = 84.3 bits (207), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 51/174 (29%), Positives = 86/174 (49%)

Query: 372 RARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRV 431
           R  +F    K+   M   G +P+V T+  ++        L EAL +F +M  +G EPD +
Sbjct: 508 RLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDAL 567

Query: 432 TYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEM 491
            YCTLID   K     + + ++  MQ   +S D    +V+I+ L K   ++ A + F  +
Sbjct: 568 AYCTLIDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNL 627

Query: 492 VNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVL 545
           +     P++VTYN MI      R    A +++  ++   F P+ VT +I++ VL
Sbjct: 628 IEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVL 681



 Score = 79.3 bits (194), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 62/293 (21%), Positives = 116/293 (39%), Gaps = 37/293 (12%)

Query: 362 TYTTMV-GILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQ 420
           TYT ++ G+    R + A   +  Q+++ G +P++VTY+ LI  + +   L     +++ 
Sbjct: 393 TYTILIKGLCQDGRIYEAFG-MYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYED 451

Query: 421 MQVVGCEPDRVTYCTLIDIHAKAGFL---------------------------------- 446
           M  +G  PD V Y  L+D  +K G +                                  
Sbjct: 452 MIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNR 511

Query: 447 -DVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNI 505
            D A+ +++ M   G+ PD  T++ ++      G L+ A  LF  M   G  P+ + Y  
Sbjct: 512 FDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCT 571

Query: 506 MIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKN 565
           +I    K       L+L+  MQ      D    ++V+ +L  C  +++A   F  +    
Sbjct: 572 LIDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGK 631

Query: 566 WVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRV 618
             PD   Y  ++  +     + +A   +E +      PN  T   L+    ++
Sbjct: 632 MEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKI 684



 Score = 41.2 bits (95), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 51/250 (20%), Positives = 95/250 (38%), Gaps = 52/250 (20%)

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKM------------QAA 459
           N AL  F+  ++ G +P   ++ T+  +  + G  DVA  ++ +M               
Sbjct: 84  NSALKYFRWAEISGKDP---SFYTIAHVLIRNGMFDVADKVFDEMITNRGKDFNVLGSIR 140

Query: 460 GLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGC-IPNLVTYNIMIALQAKARNYQS 518
             S D      ++ C  + G +  A ++F      G  IP    Y ++ +L    R    
Sbjct: 141 DRSLDADVCKFLMECCCRYGMVDKALEIFVYSTQLGVVIPQDSVYRMLNSLIGSDRVDLI 200

Query: 519 ALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVD 578
           A   +  +   G EP  V+                                   +G ++D
Sbjct: 201 A-DHFDKLCRGGIEPSGVS----------------------------------AHGFVLD 225

Query: 579 LWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKP 638
                G V KA +++  +++ G R  + +CN +L   L V Q+  A  LL  +L+ G  P
Sbjct: 226 ALFCKGEVTKALDFHRLVMERGFRVGIVSCNKVLKG-LSVDQIEVASRLLSLVLDCGPAP 284

Query: 639 SLQTYTLLLS 648
           ++ T+  L++
Sbjct: 285 NVVTFCTLIN 294


>gi|384247929|gb|EIE21414.1| TPR-like protein [Coccomyxa subellipsoidea C-169]
          Length = 448

 Score =  151 bits (382), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 105/366 (28%), Positives = 173/366 (47%), Gaps = 12/366 (3%)

Query: 298 VESVSRILRQWKWGPLAEEALGNTNYSMDAYQANQVLKQLQDHTVALG-----FFNWLR- 351
           VE + RI+R       A  A+    + +D+     +LK+L  H V L       F+WLR 
Sbjct: 3   VEDLLRIVRSLPPEESAVAAVSRGLFYLDSRALAALLKEL--HKVGLSNRASELFDWLRS 60

Query: 352 ----RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGR 407
                +     D +TYTT++   G  +Q     +L+ +M   G   NV TY+ L++   +
Sbjct: 61  LPDNHELAHLCDVYTYTTIISQCGSHQQLRKALELVAEMRGHGVVCNVHTYSALMNVCIK 120

Query: 408 ANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFT 467
           AN L  ALDV+ Q+   GC P+ VTY  LIDIH K G    A+ +   ++  G  P+  T
Sbjct: 121 ANELELALDVYGQLLREGCTPNLVTYNILIDIHGKMGNWQEAVQVLDALEDQGTKPEVRT 180

Query: 468 YSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQ 527
           Y+ I++   ++G  + A +++  M+  G  P   TY  +I+   K    + AL++++DM 
Sbjct: 181 YNTILSACNRSGQPEHALRVYERMLADGAQPTATTYTALISAYGKTGKIEEALRIFQDMV 240

Query: 528 NAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVR 587
             G E + +TYS ++      G    A  +  EM R N  P+   +  L+    + G  +
Sbjct: 241 RRGCERNVITYSSLISACEKAGRWQLALELLDEMHRDNCKPNTVTFNALLSACAQGGQWK 300

Query: 588 KAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
            A + +E M   G +P+  +   L+SAF R  Q   A   L  M   G +P +  Y +++
Sbjct: 301 AAQDVFEQMPSCGCKPDAVSYAILISAFDRGNQWCRALQALDEMQGQGHRPDVGVYNVVI 360

Query: 648 SCCTEA 653
              T +
Sbjct: 361 EALTRS 366



 Score =  145 bits (366), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 87/300 (29%), Positives = 153/300 (51%), Gaps = 4/300 (1%)

Query: 326 DAYQANQVLKQLQDHTV---ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKL 382
           D Y    ++ Q   H     AL     +R   G   + HTY+ ++ +  +A +      +
Sbjct: 72  DVYTYTTIISQCGSHQQLRKALELVAEMRGH-GVVCNVHTYSALMNVCIKANELELALDV 130

Query: 383 LDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAK 442
             Q++R+GC PN+VTYN LI  +G+     EA+ V   ++  G +P+  TY T++    +
Sbjct: 131 YGQLLREGCTPNLVTYNILIDIHGKMGNWQEAVQVLDALEDQGTKPEVRTYNTILSACNR 190

Query: 443 AGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVT 502
           +G  + A+ +Y++M A G  P   TY+ +I+  GK G ++ A ++F +MV +GC  N++T
Sbjct: 191 SGQPEHALRVYERMLADGAQPTATTYTALISAYGKTGKIEEALRIFQDMVRRGCERNVIT 250

Query: 503 YNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMR 562
           Y+ +I+   KA  +Q AL+L  +M     +P+ VT++ ++      G    A+ VF +M 
Sbjct: 251 YSSLISACEKAGRWQLALELLDEMHRDNCKPNTVTFNALLSACAQGGQWKAAQDVFEQMP 310

Query: 563 RKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLS 622
                PD   Y +L+  + +     +A +  + M   G RP+V   N ++ A  R G LS
Sbjct: 311 SCGCKPDAVSYAILISAFDRGNQWCRALQALDEMQGQGHRPDVGVYNVVIEALTRSGVLS 370



 Score = 89.7 bits (221), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 48/168 (28%), Positives = 86/168 (51%)

Query: 362 TYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQM 421
           TYT ++   G+  +     ++   MVR GC+ NV+TY+ LI +  +A     AL++  +M
Sbjct: 215 TYTALISAYGKTGKIEEALRIFQDMVRRGCERNVITYSSLISACEKAGRWQLALELLDEM 274

Query: 422 QVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHL 481
               C+P+ VT+  L+   A+ G    A D++++M + G  PD  +Y+++I+   +    
Sbjct: 275 HRDNCKPNTVTFNALLSACAQGGQWKAAQDVFEQMPSCGCKPDAVSYAILISAFDRGNQW 334

Query: 482 QAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNA 529
             A Q   EM  QG  P++  YN++I    ++    + LK  +  Q A
Sbjct: 335 CRALQALDEMQGQGHRPDVGVYNVVIEALTRSGVLSAQLKAAQIFQAA 382



 Score = 89.0 bits (219), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 52/153 (33%), Positives = 81/153 (52%), Gaps = 5/153 (3%)

Query: 346 FFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSY 405
           F + +RR  G + +  TY++++    +A ++    +LLD+M RD C+PN VT+N L+ + 
Sbjct: 236 FQDMVRR--GCERNVITYSSLISACEKAGRWQLALELLDEMHRDNCKPNTVTFNALLSAC 293

Query: 406 GRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDT 465
            +      A DVF+QM   GC+PD V+Y  LI    +      A+    +MQ  G  PD 
Sbjct: 294 AQGGQWKAAQDVFEQMPSCGCKPDAVSYAILISAFDRGNQWCRALQALDEMQGQGHRPDV 353

Query: 466 FTYSVIINCLGKAGHLQA---AHQLFCEMVNQG 495
             Y+V+I  L ++G L A   A Q+F     QG
Sbjct: 354 GVYNVVIEALTRSGVLSAQLKAAQIFQAATRQG 386



 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 51/206 (24%), Positives = 91/206 (44%), Gaps = 9/206 (4%)

Query: 534 DKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWY 593
           D  TY+ ++   G    L +A  + AEMR    V +   Y  L+++  KA  +  A + Y
Sbjct: 72  DVYTYTTIISQCGSHQQLRKALELVAEMRGHGVVCNVHTYSALMNVCIKANELELALDVY 131

Query: 594 EAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEA 653
             +L+ G  PN+ T N L+    ++G   +A  +L  + + G KP ++TY  +LS C  +
Sbjct: 132 GQLLREGCTPNLVTYNILIDIHGKMGNWQEAVQVLDALEDQGTKPEVRTYNTILSACNRS 191

Query: 654 RSPYDMGFCHELMAVSG-HPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRESKRGL 712
             P      +E M   G  P      ++ S       + + +  F +M+       +RG 
Sbjct: 192 GQPEHALRVYERMLADGAQPTATTYTALISAYGKTGKIEEALRIFQDMV-------RRGC 244

Query: 713 VDAVVDFLHKSGLKEEAGSVWEVAAQ 738
              V+ +       E+AG  W++A +
Sbjct: 245 ERNVITYSSLISACEKAGR-WQLALE 269


>gi|449455399|ref|XP_004145440.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g35130-like [Cucumis sativus]
          Length = 576

 Score =  151 bits (382), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 81/309 (26%), Positives = 158/309 (51%), Gaps = 1/309 (0%)

Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLI 402
           A+  F+ ++R  G +    TYT ++ + G+  +      + D+M    C+PN+ T+  L+
Sbjct: 244 AVEIFHRMKRD-GCQPTTDTYTMLINVYGKESKSHMAQNIFDEMRTQRCKPNICTFTALV 302

Query: 403 HSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLS 462
           ++  R     +A ++F+QMQ  G EPD   Y  L++ +++AGF   A +++  MQ  G  
Sbjct: 303 NALAREGLCEKAEEIFEQMQEAGYEPDVYAYNALMESYSRAGFPYGAAEIFSLMQHMGCE 362

Query: 463 PDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKL 522
           PD  +Y+++++  G+AG  + A  +F EM   G  P + ++ ++++  + A N      +
Sbjct: 363 PDRASYNIMVDAYGRAGLHEDAQAVFEEMKRIGITPTMKSHMLLLSAYSSAGNVAKCEDI 422

Query: 523 YRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGK 582
              M  +G +PD    + ++ + G  G   + E +F+ M++     D   Y +L++++G+
Sbjct: 423 IGQMHKSGLKPDTFVMNSMLNLYGRLGQFGKMEDLFSTMQKGPCRADISTYNILINVYGR 482

Query: 583 AGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQT 642
           AG V +  E ++ +    L P+V T  S + A+ R         L + M++ G  P   T
Sbjct: 483 AGFVERMEELFQLLPAKNLEPDVVTWTSRIGAYSRKKLYKRCLELFEKMIDAGCYPDGGT 542

Query: 643 YTLLLSCCT 651
             +LLS C+
Sbjct: 543 AKVLLSACS 551



 Score =  145 bits (365), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 82/290 (28%), Positives = 142/290 (48%)

Query: 349 WLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRA 408
           W+  ++ F+ D   Y  ++   G+   +  +     +++   C P   TY  L+ +Y ++
Sbjct: 144 WIMNKSTFRPDVIVYNLLMDAYGQRSLYKDVESTYLELLESHCIPTEDTYALLLKAYCKS 203

Query: 409 NYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTY 468
             L +A  VF +M+  G  P  + Y   ID   K G    A++++ +M+  G  P T TY
Sbjct: 204 GLLEKAEAVFAEMRKYGLSPSAIVYNAYIDGLVKGGNNVKAVEIFHRMKRDGCQPTTDTY 263

Query: 469 SVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQN 528
           +++IN  GK      A  +F EM  Q C PN+ T+  ++   A+    + A +++  MQ 
Sbjct: 264 TMLINVYGKESKSHMAQNIFDEMRTQRCKPNICTFTALVNALAREGLCEKAEEIFEQMQE 323

Query: 529 AGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRK 588
           AG+EPD   Y+ +ME     G+   A  +F+ M+     PD   Y ++VD +G+AG    
Sbjct: 324 AGYEPDVYAYNALMESYSRAGFPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHED 383

Query: 589 AWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKP 638
           A   +E M + G+ P + +   LLSA+   G ++    ++  M   GLKP
Sbjct: 384 AQAVFEEMKRIGITPTMKSHMLLLSAYSSAGNVAKCEDIIGQMHKSGLKP 433



 Score =  143 bits (360), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 96/369 (26%), Positives = 179/369 (48%), Gaps = 20/369 (5%)

Query: 293 STGNVVESVSRILR-QWKWGP--LAEEALGNT----------NYSMDAYQANQVLKQLQD 339
           ST + + SV+  LR   KWGP  L  E + N           N  MDAY    + K ++ 
Sbjct: 117 STWDDIISVAVQLRLNKKWGPIILICEWIMNKSTFRPDVIVYNLLMDAYGQRSLYKDVES 176

Query: 340 HTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYN 399
             + L        ++     E TY  ++    ++        +  +M + G  P+ + YN
Sbjct: 177 TYLEL-------LESHCIPTEDTYALLLKAYCKSGLLEKAEAVFAEMRKYGLSPSAIVYN 229

Query: 400 RLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAA 459
             I    +     +A+++F +M+  GC+P   TY  LI+++ K     +A +++ +M+  
Sbjct: 230 AYIDGLVKGGNNVKAVEIFHRMKRDGCQPTTDTYTMLINVYGKESKSHMAQNIFDEMRTQ 289

Query: 460 GLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSA 519
              P+  T++ ++N L + G  + A ++F +M   G  P++  YN ++   ++A     A
Sbjct: 290 RCKPNICTFTALVNALAREGLCEKAEEIFEQMQEAGYEPDVYAYNALMESYSRAGFPYGA 349

Query: 520 LKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDL 579
            +++  MQ+ G EPD+ +Y+I+++  G  G  ++A+AVF EM+R    P    + LL+  
Sbjct: 350 AEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHEDAQAVFEEMKRIGITPTMKSHMLLLSA 409

Query: 580 WGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPS 639
           +  AGNV K  +    M ++GL+P+    NS+L+ + R+GQ      L   M     +  
Sbjct: 410 YSSAGNVAKCEDIIGQMHKSGLKPDTFVMNSMLNLYGRLGQFGKMEDLFSTMQKGPCRAD 469

Query: 640 LQTYTLLLS 648
           + TY +L++
Sbjct: 470 ISTYNILIN 478



 Score =  134 bits (338), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 88/364 (24%), Positives = 173/364 (47%), Gaps = 18/364 (4%)

Query: 392 QPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMD 451
           +P+V+ YN L+ +YG+ +   +    + ++    C P   TY  L+  + K+G L+ A  
Sbjct: 152 RPDVIVYNLLMDAYGQRSLYKDVESTYLELLESHCIPTEDTYALLLKAYCKSGLLEKAEA 211

Query: 452 MYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQA 511
           ++ +M+  GLSP    Y+  I+ L K G+   A ++F  M   GC P   TY ++I +  
Sbjct: 212 VFAEMRKYGLSPSAIVYNAYIDGLVKGGNNVKAVEIFHRMKRDGCQPTTDTYTMLINVYG 271

Query: 512 KARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEP 571
           K      A  ++ +M+    +P+  T++ ++  L   G  ++AE +F +M+   + PD  
Sbjct: 272 KESKSHMAQNIFDEMRTQRCKPNICTFTALVNALAREGLCEKAEEIFEQMQEAGYEPDVY 331

Query: 572 VYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGM 631
            Y  L++ + +AG    A E +  M   G  P+  + N ++ A+ R G   DA  + + M
Sbjct: 332 AYNALMESYSRAGFPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHEDAQAVFEEM 391

Query: 632 LNLGLKPSLQTYTLLLSCCTEARSPYDMGFCHEL---MAVSGHPAHMFLLSMPSPGPDGQ 688
             +G+ P+++++ LLLS  + A    ++  C ++   M  SG     F+++         
Sbjct: 392 KRIGITPTMKSHMLLLSAYSSAG---NVAKCEDIIGQMHKSGLKPDTFVMN------SML 442

Query: 689 NVRDHVGSFLEM------MHSEDRESKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVY 742
           N+   +G F +M      M      +     + +++   ++G  E    ++++   KN+ 
Sbjct: 443 NLYGRLGQFGKMEDLFSTMQKGPCRADISTYNILINVYGRAGFVERMEELFQLLPAKNLE 502

Query: 743 PDAV 746
           PD V
Sbjct: 503 PDVV 506



 Score =  132 bits (333), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 79/297 (26%), Positives = 147/297 (49%), Gaps = 2/297 (0%)

Query: 335 KQLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPN 394
           K+ + H +A   F+ +R Q   K +  T+T +V  L R        ++ +QM   G +P+
Sbjct: 272 KESKSH-MAQNIFDEMRTQR-CKPNICTFTALVNALAREGLCEKAEEIFEQMQEAGYEPD 329

Query: 395 VVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYK 454
           V  YN L+ SY RA +   A ++F  MQ +GCEPDR +Y  ++D + +AG  + A  +++
Sbjct: 330 VYAYNALMESYSRAGFPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHEDAQAVFE 389

Query: 455 KMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKAR 514
           +M+  G++P   ++ ++++    AG++     +  +M   G  P+    N M+ L  +  
Sbjct: 390 EMKRIGITPTMKSHMLLLSAYSSAGNVAKCEDIIGQMHKSGLKPDTFVMNSMLNLYGRLG 449

Query: 515 NYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYG 574
            +     L+  MQ      D  TY+I++ V G  G+++  E +F  +  KN  PD   + 
Sbjct: 450 QFGKMEDLFSTMQKGPCRADISTYNILINVYGRAGFVERMEELFQLLPAKNLEPDVVTWT 509

Query: 575 LLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGM 631
             +  + +    ++  E +E M+ AG  P+  T   LLSA     Q+    ++++ M
Sbjct: 510 SRIGAYSRKKLYKRCLELFEKMIDAGCYPDGGTAKVLLSACSSEEQIEQVTNVVRTM 566



 Score = 87.0 bits (214), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 61/288 (21%), Positives = 116/288 (40%), Gaps = 35/288 (12%)

Query: 456 MQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARN 515
           M  +   PD   Y+++++  G+    +     + E++   CIP   TY +++    K+  
Sbjct: 146 MNKSTFRPDVIVYNLLMDAYGQRSLYKDVESTYLELLESHCIPTEDTYALLLKAYCKSGL 205

Query: 516 YQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGL 575
            + A  ++ +M+  G  P  + Y+  ++ L   G   +A  +F  M+R    P    Y +
Sbjct: 206 LEKAEAVFAEMRKYGLSPSAIVYNAYIDGLVKGGNNVKAVEIFHRMKRDGCQPTTDTYTM 265

Query: 576 LVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLG 635
           L++++GK      A   ++ M     +PN+ T  +L++A  R G    A  + + M   G
Sbjct: 266 LINVYGKESKSHMAQNIFDEMRTQRCKPNICTFTALVNALAREGLCEKAEEIFEQMQEAG 325

Query: 636 LKPSLQTYTLLLSCCTEARSPYDMGFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVG 695
            +P +  Y  L+   + A  PY       LM                          H+G
Sbjct: 326 YEPDVYAYNALMESYSRAGFPYGAAEIFSLM-------------------------QHMG 360

Query: 696 SFLEMMHSEDRESKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYP 743
                      E  R   + +VD   ++GL E+A +V+E   +  + P
Sbjct: 361 C----------EPDRASYNIMVDAYGRAGLHEDAQAVFEEMKRIGITP 398


>gi|296081998|emb|CBI21003.3| unnamed protein product [Vitis vinifera]
          Length = 837

 Score =  151 bits (382), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 106/350 (30%), Positives = 162/350 (46%), Gaps = 28/350 (8%)

Query: 298 VESVSRILRQWKWGPLAEEALGNTNYSMDAYQANQVLKQLQDHTVALGFFNWLRRQAGFK 357
           V +V+ +LR +   PL EEA                  +L D  V  G  N         
Sbjct: 395 VFNVNSLLRGYLKAPLWEEA-----------------SKLFDEAVDCGVANIF------- 430

Query: 358 HDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDV 417
               TY  M+  L +  +      LLD MV  G  PNVV+YN +I  + R   ++ A  V
Sbjct: 431 ----TYNIMMSWLCKGGKMDEACSLLDNMVNQGMVPNVVSYNDMILGHCRKGNMDMASSV 486

Query: 418 FKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGK 477
           F  M     +P+ VTY  LID + K G  + A+D++ +M +  ++P  FT++ IIN L K
Sbjct: 487 FSDMLARDLKPNVVTYSILIDGNFKKGDSEKALDLFDQMLSLNIAPTDFTFNTIINGLCK 546

Query: 478 AGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVT 537
            G +  A       + +G IP+ +TYN ++    K  N  SAL +YR+M   G  P+ VT
Sbjct: 547 VGQMSEARDKLKNFLEEGFIPSCMTYNSIVDGFIKEGNIDSALAVYREMCEFGVSPNVVT 606

Query: 538 YSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAML 597
           Y+ ++        +D A     EMR K    D   Y  L+D + K  ++  A + +  +L
Sbjct: 607 YTSLINGFCKSNRIDLALKTRDEMREKGLELDVTAYSALIDGFCKRRDMESAQDLFFELL 666

Query: 598 QAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
           + GL PN    NS++S F  +  +  A    + M+N  +   L TYT L+
Sbjct: 667 EVGLSPNRIVYNSMISGFRDLNNMEAALVWYKKMINDRIPCDLGTYTTLI 716



 Score =  142 bits (357), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 85/289 (29%), Positives = 148/289 (51%)

Query: 360 EHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFK 419
           + T+ T++  L +  Q       L   + +G  P+ +TYN ++  + +   ++ AL V++
Sbjct: 534 DFTFNTIINGLCKVGQMSEARDKLKNFLEEGFIPSCMTYNSIVDGFIKEGNIDSALAVYR 593

Query: 420 QMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAG 479
           +M   G  P+ VTY +LI+   K+  +D+A+    +M+  GL  D   YS +I+   K  
Sbjct: 594 EMCEFGVSPNVVTYTSLINGFCKSNRIDLALKTRDEMREKGLELDVTAYSALIDGFCKRR 653

Query: 480 HLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYS 539
            +++A  LF E++  G  PN + YN MI+      N ++AL  Y+ M N     D  TY+
Sbjct: 654 DMESAQDLFFELLEVGLSPNRIVYNSMISGFRDLNNMEAALVWYKKMINDRIPCDLGTYT 713

Query: 540 IVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQA 599
            +++ L   G L  A  ++ EM  K  VPD   + +LV+     G +  A +  E M + 
Sbjct: 714 TLIDGLLKEGRLVFASDLYMEMLSKGIVPDIITFHVLVNGLCNKGQLENARKILEEMDRK 773

Query: 600 GLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
            + P+V   N+L++ + R G L +A+ L   ML+ GL P   TY +L++
Sbjct: 774 NMTPSVLIYNTLIAGYFREGNLKEAFTLHDEMLDRGLVPDDVTYDILIN 822



 Score = 99.8 bits (247), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 74/299 (24%), Positives = 139/299 (46%), Gaps = 5/299 (1%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           ++  F+ D   +  ++    RA +        + M+     P V   N L+ +  R N +
Sbjct: 142 KRFDFELDHRVFNYLLNAYIRANRIENAIDCFNAMICQDVIPWVPYMNILLTALVRRNMI 201

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
            E  D++ +M + G   D  T   ++    K G ++ A + +++ +  G+  D   YS+I
Sbjct: 202 GELRDLYNKMVLRGIYGDHFTVHVMVRACLKEGRVEEAEEYFRETKERGVKLDAGAYSII 261

Query: 472 INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF 531
           I  + K  +     +L  EM  +G +P+  T+  +I       N   AL+L  +M N G 
Sbjct: 262 IQAVCKKPNSNLGLELLEEMKERGWVPSEATFTSVIVACVAQGNMVEALRLKEEMINCGK 321

Query: 532 EPDKVTYSIVMEVLGHC--GYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKA 589
             + V  + +M+  G+C  G LD A  +F ++      P++  Y +L++    +GN+ KA
Sbjct: 322 PMNLVVATSLMK--GYCAQGNLDSALNLFNKITEDGLFPNKVTYSVLIEGCCNSGNIEKA 379

Query: 590 WEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
            E Y  M   G+ P+V   NSLL  +L+     +A  L    ++ G+  ++ TY +++S
Sbjct: 380 SELYTQMKLNGIPPSVFNVNSLLRGYLKAPLWEEASKLFDEAVDCGVA-NIFTYNIMMS 437



 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 79/357 (22%), Positives = 153/357 (42%), Gaps = 23/357 (6%)

Query: 322 NYSMDAYQANQVLKQLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQ-FGAIN 380
           N+ +DA     +L  + D   AL +F     Q GF      Y  ++ IL R+ +  G   
Sbjct: 61  NHVIDA-----LLCHVNDPQSALRYFKRAETQRGFIRGVDAYCVLLHILMRSPETHGHAR 115

Query: 381 KLLDQMVRDGCQPN-VVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDI 439
           KLL++ V     P+ VV  + LI+   R ++                E D   +  L++ 
Sbjct: 116 KLLNRYVSGDSDPSPVVFVDHLINCAKRFDF----------------ELDHRVFNYLLNA 159

Query: 440 HAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPN 499
           + +A  ++ A+D +  M    + P     ++++  L +   +     L+ +MV +G   +
Sbjct: 160 YIRANRIENAIDCFNAMICQDVIPWVPYMNILLTALVRRNMIGELRDLYNKMVLRGIYGD 219

Query: 500 LVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFA 559
             T ++M+    K    + A + +R+ +  G + D   YSI+++ +      +    +  
Sbjct: 220 HFTVHVMVRACLKEGRVEEAEEYFRETKERGVKLDAGAYSIIIQAVCKKPNSNLGLELLE 279

Query: 560 EMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVG 619
           EM+ + WVP E  +  ++      GN+ +A    E M+  G   N+    SL+  +   G
Sbjct: 280 EMKERGWVPSEATFTSVIVACVAQGNMVEALRLKEEMINCGKPMNLVVATSLMKGYCAQG 339

Query: 620 QLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGFCHELMAVSGHPAHMF 676
            L  A +L   +   GL P+  TY++L+  C  + +       +  M ++G P  +F
Sbjct: 340 NLDSALNLFNKITEDGLFPNKVTYSVLIEGCCNSGNIEKASELYTQMKLNGIPPSVF 396



 Score = 57.0 bits (136), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 35/116 (30%), Positives = 59/116 (50%), Gaps = 2/116 (1%)

Query: 359 DEHTYTTMV-GILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDV 417
           D  TYTT++ G+L   R   A + L  +M+  G  P+++T++ L++       L  A  +
Sbjct: 708 DLGTYTTLIDGLLKEGRLVFA-SDLYMEMLSKGIVPDIITFHVLVNGLCNKGQLENARKI 766

Query: 418 FKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIIN 473
            ++M      P  + Y TLI  + + G L  A  ++ +M   GL PD  TY ++IN
Sbjct: 767 LEEMDRKNMTPSVLIYNTLIAGYFREGNLKEAFTLHDEMLDRGLVPDDVTYDILIN 822



 Score = 48.1 bits (113), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 30/84 (35%), Positives = 40/84 (47%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           G   D  T+  +V  L    Q     K+L++M R    P+V+ YN LI  Y R   L EA
Sbjct: 739 GIVPDIITFHVLVNGLCNKGQLENARKILEEMDRKNMTPSVLIYNTLIAGYFREGNLKEA 798

Query: 415 LDVFKQMQVVGCEPDRVTYCTLID 438
             +  +M   G  PD VTY  LI+
Sbjct: 799 FTLHDEMLDRGLVPDDVTYDILIN 822


>gi|147858101|emb|CAN78867.1| hypothetical protein VITISV_041982 [Vitis vinifera]
          Length = 962

 Score =  151 bits (382), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 117/439 (26%), Positives = 197/439 (44%), Gaps = 44/439 (10%)

Query: 362 TYTTMV-GILGRARQFGAIN---KLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDV 417
           TY T++ G L +    G +N   +LLD M  +GC+P+  TYN L+  + +   L  A   
Sbjct: 487 TYNTLINGYLTK----GNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFY 542

Query: 418 FKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGK 477
           F++M   G  P+ V+Y TLID H+K G +D+A+ + ++M+  G +P+  +Y+ +IN L K
Sbjct: 543 FQEMVECGLNPNPVSYTTLIDGHSKDGKVDIALSLLERMEEMGCNPNVESYNAVINGLSK 602

Query: 478 AGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVT 537
                 A ++  +M  QG +PN++TY  +I    +    Q A K++ DM+     P+  T
Sbjct: 603 ENRFSEAEKICDKMAEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYT 662

Query: 538 YSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAML 597
           YS ++  L   G  DEAE +  EM RK   PDE  +  L+D +   G +  A+     M+
Sbjct: 663 YSSLIYGLCQEGKADEAEILLKEMERKGLAPDEVTFTSLIDGFVVLGRIDHAFLLLRRMV 722

Query: 598 QAGLRPNVPTCNSLLSAFLRVGQLSD------------------------AYHLLQGMLN 633
             G +PN  T + LL    +   L +                          +LL  M  
Sbjct: 723 DVGCKPNYRTYSVLLKGLQKECLLLEEKVAVQHEAVYSFSPHEKDVNFEIVSNLLARMSE 782

Query: 634 LGLKPSLQTYTLLLS-CCTEARSPYDMGFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRD 692
           +G +P+L TY+ L+S  C + R         ++      P      S+         V D
Sbjct: 783 IGCEPTLDTYSTLVSGLCRKGRFYEAEQLVKDMKERGFCPDREIYYSLLIAHCKNLEV-D 841

Query: 693 HVGSFLEMMHSEDRESKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAV------ 746
           H       + ++  +    +  A++  L K+G  EEA ++++   +K    D +      
Sbjct: 842 HALKIFHSIEAKGFQLHLSIYRALICALCKAGQVEEAQALFDNMLEKEWNADEIVWTVLV 901

Query: 747 ----KEKGMSYWLINLHVM 761
               KE  +   +  LH+M
Sbjct: 902 DGLLKEGELDLCMKLLHIM 920



 Score =  149 bits (377), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 114/426 (26%), Positives = 191/426 (44%), Gaps = 2/426 (0%)

Query: 323 YSMDAYQANQVLKQLQDHTVALGFFNWLRR--QAGFKHDEHTYTTMVGILGRARQFGAIN 380
           +    Y  N +L QL    +  G  N  ++   +G +    T+ T++ IL +  +     
Sbjct: 201 FGFSLYSCNTLLIQLAKFEMVEGARNLYKQMLNSGIQPSLLTFNTLINILSKKGKVREAE 260

Query: 381 KLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIH 440
            +L Q+ +    P+V TY  LI  + R   L+ A  VF +M   GC+P+ VTY TLI+  
Sbjct: 261 LILSQIFQYDLSPDVFTYTSLILGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGL 320

Query: 441 AKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNL 500
              G +D A+DM ++M   G+ P  +TY++ I  L    H + A +L   M  +GC PN+
Sbjct: 321 CNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNV 380

Query: 501 VTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAE 560
            TY  +I+  ++    + A+ LY  M   G  P+ VTY+ ++  L   G    A  +F  
Sbjct: 381 QTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHW 440

Query: 561 MRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQ 620
           M     + +   Y  ++      G++ KA   +E ML+ G  P V T N+L++ +L  G 
Sbjct: 441 MEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGN 500

Query: 621 LSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGFCHELMAVSGHPAHMFLLSM 680
           +++A  LL  M   G +P   TY  L+S  ++        F  + M   G   +    + 
Sbjct: 501 VNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTT 560

Query: 681 PSPGPDGQNVRDHVGSFLEMMHSEDRESKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKN 740
              G       D   S LE M            +AV++ L K     EA  + +  A++ 
Sbjct: 561 LIDGHSKDGKVDIALSLLERMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMAEQG 620

Query: 741 VYPDAV 746
           + P+ +
Sbjct: 621 LLPNVI 626



 Score =  145 bits (366), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 90/307 (29%), Positives = 156/307 (50%), Gaps = 1/307 (0%)

Query: 341 TVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNR 400
           + AL  F+W+       + + TY  ++  L           L ++M++ G  P VVTYN 
Sbjct: 432 STALKIFHWMEGHGSLANTQ-TYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNT 490

Query: 401 LIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAG 460
           LI+ Y     +N A  +   M+  GCEPD  TY  L+   +K G L+ A   +++M   G
Sbjct: 491 LINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECG 550

Query: 461 LSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSAL 520
           L+P+  +Y+ +I+   K G +  A  L   M   GC PN+ +YN +I   +K   +  A 
Sbjct: 551 LNPNPVSYTTLIDGHSKDGKVDIALSLLERMEEMGCNPNVESYNAVINGLSKENRFSEAE 610

Query: 521 KLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLW 580
           K+   M   G  P+ +TY+ +++ L   G    A  +F +M ++  +P+   Y  L+   
Sbjct: 611 KICDKMAEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGL 670

Query: 581 GKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSL 640
            + G   +A    + M + GL P+  T  SL+  F+ +G++  A+ LL+ M+++G KP+ 
Sbjct: 671 CQEGKADEAEILLKEMERKGLAPDEVTFTSLIDGFVVLGRIDHAFLLLRRMVDVGCKPNY 730

Query: 641 QTYTLLL 647
           +TY++LL
Sbjct: 731 RTYSVLL 737



 Score =  137 bits (344), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 93/314 (29%), Positives = 148/314 (47%), Gaps = 1/314 (0%)

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
           + G +   +TYT  +  L          +L+ +M + GC+PNV TY  LI    R   L 
Sbjct: 338 EKGIEPTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLE 397

Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
            A+ ++ +M   G  P+ VTY  LI+     G    A+ ++  M+  G   +T TY+ II
Sbjct: 398 VAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEII 457

Query: 473 NCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFE 532
             L   G ++ A  LF +M+  G +P +VTYN +I       N  +A +L   M+  G E
Sbjct: 458 KGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCE 517

Query: 533 PDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEW 592
           PD+ TY+ ++      G L+ A   F EM      P+   Y  L+D   K G V  A   
Sbjct: 518 PDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTTLIDGHSKDGKVDIALSL 577

Query: 593 YEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS-CCT 651
            E M + G  PNV + N++++   +  + S+A  +   M   GL P++ TYT L+   C 
Sbjct: 578 LERMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMAEQGLLPNVITYTTLIDGLCR 637

Query: 652 EARSPYDMGFCHEL 665
             R+ +     H++
Sbjct: 638 NGRTQFAFKIFHDM 651



 Score =  128 bits (322), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 102/394 (25%), Positives = 176/394 (44%), Gaps = 31/394 (7%)

Query: 272 SKP--SREMKIPAGLAPFSRHFASTGNVVESVSRILRQWKWGPLAEEALGNTNYSMDAYQ 329
           SKP  S    +PA   PF         +V  V  IL + +W   +E  L   +  + A+ 
Sbjct: 69  SKPHISSHFAVPASREPFQA-------IVSRVCAILSRVQWKGSSE--LKQLSPQLKAHH 119

Query: 330 ANQVLKQLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRD 389
             +++   +D    + FF W+ ++  +KH+ + + +M+  L R R F   + +   M++ 
Sbjct: 120 VAEIVAVHKDTESVIQFFYWISKRPFYKHNMNCFISMLNRLVRDRVFAPADHIRILMIKA 179

Query: 390 --------------------GCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPD 429
                               G   ++ + N L+    +   +  A +++KQM   G +P 
Sbjct: 180 CRNEEEIRRVADFLNEISGMGFGFSLYSCNTLLIQLAKFEMVEGARNLYKQMLNSGIQPS 239

Query: 430 RVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFC 489
            +T+ TLI+I +K G +  A  +  ++    LSPD FTY+ +I    +  +L  A  +F 
Sbjct: 240 LLTFNTLINILSKKGKVREAELILSQIFQYDLSPDVFTYTSLILGHCRNRNLDLAFGVFD 299

Query: 490 EMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCG 549
            MV +GC PN VTY+ +I           AL +  +M   G EP   TY++ +  L    
Sbjct: 300 RMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITALCAIE 359

Query: 550 YLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCN 609
           + +EA  + A M+++   P+   Y  L+    + G +  A   Y  ML+ GL PN  T N
Sbjct: 360 HEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYN 419

Query: 610 SLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTY 643
           +L++     G+ S A  +   M   G   + QTY
Sbjct: 420 ALINELCVGGRFSTALKIFHWMEGHGSLANTQTY 453



 Score =  118 bits (296), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 81/305 (26%), Positives = 144/305 (47%), Gaps = 1/305 (0%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           ++ G + +  TYT ++  L R  +      L  +M+++G  PN VTYN LI+        
Sbjct: 372 KKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRF 431

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
           + AL +F  M+  G   +  TY  +I      G ++ AM +++KM   G  P   TY+ +
Sbjct: 432 STALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTL 491

Query: 472 INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF 531
           IN     G++  A +L   M   GC P+  TYN +++  +K    +SA   +++M   G 
Sbjct: 492 INGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGL 551

Query: 532 EPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWE 591
            P+ V+Y+ +++     G +D A ++   M      P+   Y  +++   K     +A +
Sbjct: 552 NPNPVSYTTLIDGHSKDGKVDIALSLLERMEEMGCNPNVESYNAVINGLSKENRFSEAEK 611

Query: 592 WYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTY-TLLLSCC 650
             + M + GL PNV T  +L+    R G+   A+ +   M      P+L TY +L+   C
Sbjct: 612 ICDKMAEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLC 671

Query: 651 TEARS 655
            E ++
Sbjct: 672 QEGKA 676



 Score =  118 bits (295), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 85/311 (27%), Positives = 138/311 (44%), Gaps = 28/311 (9%)

Query: 362 TYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQM 421
           TYTT++  L R  +     K+   M +  C PN+ TY+ LI+   +    +EA  + K+M
Sbjct: 627 TYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKADEAEILLKEM 686

Query: 422 QVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHL 481
           +  G  PD VT+ +LID     G +D A  + ++M   G  P+  TYSV++  L K   L
Sbjct: 687 ERKGLAPDEVTFTSLIDGFVVLGRIDHAFLLLRRMVDVGCKPNYRTYSVLLKGLQKECLL 746

Query: 482 ------------------------QAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQ 517
                                   +    L   M   GC P L TY+ +++   +   + 
Sbjct: 747 LEEKVAVQHEAVYSFSPHEKDVNFEIVSNLLARMSEIGCEPTLDTYSTLVSGLCRKGRFY 806

Query: 518 SALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYL--DEAEAVFAEMRRKNWVPDEPVYGL 575
            A +L +DM+  GF PD+  Y  ++  + HC  L  D A  +F  +  K +     +Y  
Sbjct: 807 EAEQLVKDMKERGFCPDREIYYSLL--IAHCKNLEVDHALKIFHSIEAKGFQLHLSIYRA 864

Query: 576 LVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLG 635
           L+    KAG V +A   ++ ML+     +      L+   L+ G+L     LL  M +  
Sbjct: 865 LICALCKAGQVEEAQALFDNMLEKEWNADEIVWTVLVDGLLKEGELDLCMKLLHIMESKN 924

Query: 636 LKPSLQTYTLL 646
             P++QTY +L
Sbjct: 925 FTPNIQTYVIL 935



 Score = 78.6 bits (192), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 50/187 (26%), Positives = 88/187 (47%)

Query: 376 FGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCT 435
           F  ++ LL +M   GC+P + TY+ L+    R     EA  + K M+  G  PDR  Y +
Sbjct: 770 FEIVSNLLARMSEIGCEPTLDTYSTLVSGLCRKGRFYEAEQLVKDMKERGFCPDREIYYS 829

Query: 436 LIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQG 495
           L+  H K   +D A+ ++  ++A G       Y  +I  L KAG ++ A  LF  M+ + 
Sbjct: 830 LLIAHCKNLEVDHALKIFHSIEAKGFQLHLSIYRALICALCKAGQVEEAQALFDNMLEKE 889

Query: 496 CIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAE 555
              + + + +++    K       +KL   M++  F P+  TY I+   L   G   E+E
Sbjct: 890 WNADEIVWTVLVDGLLKEGELDLCMKLLHIMESKNFTPNIQTYVILGRELSRIGKSIESE 949

Query: 556 AVFAEMR 562
            +  +++
Sbjct: 950 PLADKLK 956


>gi|242045792|ref|XP_002460767.1| hypothetical protein SORBIDRAFT_02g034620 [Sorghum bicolor]
 gi|241924144|gb|EER97288.1| hypothetical protein SORBIDRAFT_02g034620 [Sorghum bicolor]
          Length = 762

 Score =  151 bits (382), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 95/312 (30%), Positives = 151/312 (48%)

Query: 359 DEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVF 418
           DE  YTT++          +  +  D+M R G   + VTY  LI+   RA  L EA  V 
Sbjct: 363 DEAVYTTVLSGFCNKGDLVSARRWFDEMQRKGLATDGVTYTTLINGLCRAGELKEAEKVL 422

Query: 419 KQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKA 478
           ++M     + D VTY  L+D + K G +  A  ++  M   G++P+  TY+ + + L K 
Sbjct: 423 QEMLARRLDVDEVTYTVLVDGYCKRGKMAEAFQVHNTMVQRGVAPNVVTYTALSDGLCKQ 482

Query: 479 GHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTY 538
           G +QAA++L  EM N+G   N  TYN +I    KA     A++   DM  AG +PD  TY
Sbjct: 483 GDVQAANELLHEMSNKGLELNACTYNSLINGLCKAGYLDQAMRTMADMDAAGLKPDVYTY 542

Query: 539 SIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQ 598
           + +++ L   G LD A  +  EM      P    Y +L++ +  +G V    +  E ML+
Sbjct: 543 TTLIDALCKSGELDRAHDLLQEMLDNGIKPTIVTYNVLMNGFCMSGRVEGGKKLLEWMLE 602

Query: 599 AGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYD 658
             + PN  T NSL+  +     +     + +GM +  ++P+  TY +L+    +ARS  +
Sbjct: 603 KNIHPNATTYNSLMKQYCIGNNMKSTTEIYKGMCSRNVEPNENTYNILIKGHCKARSMKE 662

Query: 659 MGFCHELMAVSG 670
             + H  M   G
Sbjct: 663 AQYFHNEMIEKG 674



 Score =  133 bits (335), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 87/293 (29%), Positives = 142/293 (48%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           G + +   YT++V +L    +      +++ MV      +   Y  ++  +     L  A
Sbjct: 324 GVEPNATVYTSVVALLCDKGRVSDALTVVEDMVHHKVILDEAVYTTVLSGFCNKGDLVSA 383

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
              F +MQ  G   D VTY TLI+   +AG L  A  + ++M A  L  D  TY+V+++ 
Sbjct: 384 RRWFDEMQRKGLATDGVTYTTLINGLCRAGELKEAEKVLQEMLARRLDVDEVTYTVLVDG 443

Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPD 534
             K G +  A Q+   MV +G  PN+VTY  +     K  + Q+A +L  +M N G E +
Sbjct: 444 YCKRGKMAEAFQVHNTMVQRGVAPNVVTYTALSDGLCKQGDVQAANELLHEMSNKGLELN 503

Query: 535 KVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYE 594
             TY+ ++  L   GYLD+A    A+M      PD   Y  L+D   K+G + +A +  +
Sbjct: 504 ACTYNSLINGLCKAGYLDQAMRTMADMDAAGLKPDVYTYTTLIDALCKSGELDRAHDLLQ 563

Query: 595 AMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
            ML  G++P + T N L++ F   G++     LL+ ML   + P+  TY  L+
Sbjct: 564 EMLDNGIKPTIVTYNVLMNGFCMSGRVEGGKKLLEWMLEKNIHPNATTYNSLM 616



 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 86/312 (27%), Positives = 144/312 (46%), Gaps = 1/312 (0%)

Query: 359 DEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVF 418
           DE TYT +V    +  +     ++ + MV+ G  PNVVTY  L     +   +  A ++ 
Sbjct: 433 DEVTYTVLVDGYCKRGKMAEAFQVHNTMVQRGVAPNVVTYTALSDGLCKQGDVQAANELL 492

Query: 419 KQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKA 478
            +M   G E +  TY +LI+   KAG+LD AM     M AAGL PD +TY+ +I+ L K+
Sbjct: 493 HEMSNKGLELNACTYNSLINGLCKAGYLDQAMRTMADMDAAGLKPDVYTYTTLIDALCKS 552

Query: 479 GHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTY 538
           G L  AH L  EM++ G  P +VTYN+++     +   +   KL   M      P+  TY
Sbjct: 553 GELDRAHDLLQEMLDNGIKPTIVTYNVLMNGFCMSGRVEGGKKLLEWMLEKNIHPNATTY 612

Query: 539 SIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQ 598
           + +M+       +     ++  M  +N  P+E  Y +L+    KA ++++A  ++  M++
Sbjct: 613 NSLMKQYCIGNNMKSTTEIYKGMCSRNVEPNENTYNILIKGHCKARSMKEAQYFHNEMIE 672

Query: 599 AGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSC-CTEARSPY 657
            G R    + ++L+    +  +  +A  L   M   G       Y   +     E     
Sbjct: 673 KGFRLTASSYSALIRLLNKKKKFVEARKLFHDMRKEGFTAEPDVYNFYIDFNFNEDNLEA 732

Query: 658 DMGFCHELMAVS 669
            +  C EL+  S
Sbjct: 733 TLALCDELVEAS 744



 Score =  127 bits (319), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 85/309 (27%), Positives = 144/309 (46%), Gaps = 1/309 (0%)

Query: 339 DHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTY 398
           D   A  +F+ ++R+ G   D  TYTT++  L RA +     K+L +M+      + VTY
Sbjct: 379 DLVSARRWFDEMQRK-GLATDGVTYTTLINGLCRAGELKEAEKVLQEMLARRLDVDEVTY 437

Query: 399 NRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQA 458
             L+  Y +   + EA  V   M   G  P+ VTY  L D   K G +  A ++  +M  
Sbjct: 438 TVLVDGYCKRGKMAEAFQVHNTMVQRGVAPNVVTYTALSDGLCKQGDVQAANELLHEMSN 497

Query: 459 AGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQS 518
            GL  +  TY+ +IN L KAG+L  A +   +M   G  P++ TY  +I    K+     
Sbjct: 498 KGLELNACTYNSLINGLCKAGYLDQAMRTMADMDAAGLKPDVYTYTTLIDALCKSGELDR 557

Query: 519 ALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVD 578
           A  L ++M + G +P  VTY+++M      G ++  + +   M  KN  P+   Y  L+ 
Sbjct: 558 AHDLLQEMLDNGIKPTIVTYNVLMNGFCMSGRVEGGKKLLEWMLEKNIHPNATTYNSLMK 617

Query: 579 LWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKP 638
            +    N++   E Y+ M    + PN  T N L+    +   + +A +    M+  G + 
Sbjct: 618 QYCIGNNMKSTTEIYKGMCSRNVEPNENTYNILIKGHCKARSMKEAQYFHNEMIEKGFRL 677

Query: 639 SLQTYTLLL 647
           +  +Y+ L+
Sbjct: 678 TASSYSALI 686



 Score =  124 bits (312), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 79/257 (30%), Positives = 127/257 (49%), Gaps = 6/257 (2%)

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
           Q G   +  TYT +   L +     A N+LL +M   G + N  TYN LI+   +A YL+
Sbjct: 462 QRGVAPNVVTYTALSDGLCKQGDVQAANELLHEMSNKGLELNACTYNSLINGLCKAGYLD 521

Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
           +A+     M   G +PD  TY TLID   K+G LD A D+ ++M   G+ P   TY+V++
Sbjct: 522 QAMRTMADMDAAGLKPDVYTYTTLIDALCKSGELDRAHDLLQEMLDNGIKPTIVTYNVLM 581

Query: 473 NCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFE 532
           N    +G ++   +L   M+ +   PN  TYN ++       N +S  ++Y+ M +   E
Sbjct: 582 NGFCMSGRVEGGKKLLEWMLEKNIHPNATTYNSLMKQYCIGNNMKSTTEIYKGMCSRNVE 641

Query: 533 PDKVTYSIVMEVLGHCGY--LDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAW 590
           P++ TY+I+++  GHC    + EA+    EM  K +      Y  L+ L  K     +A 
Sbjct: 642 PNENTYNILIK--GHCKARSMKEAQYFHNEMIEKGFRLTASSYSALIRLLNKKKKFVEAR 699

Query: 591 EWYEAMLQAGL--RPNV 605
           + +  M + G    P+V
Sbjct: 700 KLFHDMRKEGFTAEPDV 716



 Score =  124 bits (312), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 92/336 (27%), Positives = 150/336 (44%), Gaps = 49/336 (14%)

Query: 362 TYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQM 421
           +Y  ++ +L  A +     +L D+M      P+VVTY  LIH Y     L  A+ +   M
Sbjct: 264 SYNILLKVLCGAGRVEDARQLFDEM---ASPPDVVTYGILIHGYCALGELENAVKLLDDM 320

Query: 422 QVVGCEPDRVTYCTLIDIHAKAG----FLDVAMDM------------------------- 452
              G EP+   Y +++ +    G     L V  DM                         
Sbjct: 321 VARGVEPNATVYTSVVALLCDKGRVSDALTVVEDMVHHKVILDEAVYTTVLSGFCNKGDL 380

Query: 453 ------YKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIM 506
                 + +MQ  GL+ D  TY+ +IN L +AG L+ A ++  EM+ +    + VTY ++
Sbjct: 381 VSARRWFDEMQRKGLATDGVTYTTLINGLCRAGELKEAEKVLQEMLARRLDVDEVTYTVL 440

Query: 507 IALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNW 566
           +    K      A +++  M   G  P+ VTY+ + + L   G +  A  +  EM  K  
Sbjct: 441 VDGYCKRGKMAEAFQVHNTMVQRGVAPNVVTYTALSDGLCKQGDVQAANELLHEMSNKGL 500

Query: 567 VPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYH 626
             +   Y  L++   KAG + +A      M  AGL+P+V T  +L+ A  + G+L  A+ 
Sbjct: 501 ELNACTYNSLINGLCKAGYLDQAMRTMADMDAAGLKPDVYTYTTLIDALCKSGELDRAHD 560

Query: 627 LLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGFC 662
           LLQ ML+ G+KP++ TY +L++           GFC
Sbjct: 561 LLQEMLDNGIKPTIVTYNVLMN-----------GFC 585



 Score =  117 bits (292), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 86/294 (29%), Positives = 138/294 (46%), Gaps = 17/294 (5%)

Query: 369 ILGRARQFG------AINKLLDQMVRDGC--------QPNVVTYNRLIHSYGRANYLNEA 414
           +L R RQ+G      A N +L ++  D            NV +YN L+     A  + +A
Sbjct: 222 LLRRVRQYGISPSPEACNAVLSRLPLDEAIELFQGLPDKNVCSYNILLKVLCGAGRVEDA 281

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
             +F +M      PD VTY  LI  +   G L+ A+ +   M A G+ P+   Y+ ++  
Sbjct: 282 RQLFDEM---ASPPDVVTYGILIHGYCALGELENAVKLLDDMVARGVEPNATVYTSVVAL 338

Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPD 534
           L   G +  A  +  +MV+   I +   Y  +++      +  SA + + +MQ  G   D
Sbjct: 339 LCDKGRVSDALTVVEDMVHHKVILDEAVYTTVLSGFCNKGDLVSARRWFDEMQRKGLATD 398

Query: 535 KVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYE 594
            VTY+ ++  L   G L EAE V  EM  +    DE  Y +LVD + K G + +A++ + 
Sbjct: 399 GVTYTTLINGLCRAGELKEAEKVLQEMLARRLDVDEVTYTVLVDGYCKRGKMAEAFQVHN 458

Query: 595 AMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
            M+Q G+ PNV T  +L     + G +  A  LL  M N GL+ +  TY  L++
Sbjct: 459 TMVQRGVAPNVVTYTALSDGLCKQGDVQAANELLHEMSNKGLELNACTYNSLIN 512



 Score = 90.1 bits (222), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 52/189 (27%), Positives = 96/189 (50%), Gaps = 2/189 (1%)

Query: 354 AGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNE 413
           AG K D +TYTT++  L ++ +    + LL +M+ +G +P +VTYN L++ +  +  +  
Sbjct: 533 AGLKPDVYTYTTLIDALCKSGELDRAHDLLQEMLDNGIKPTIVTYNVLMNGFCMSGRVEG 592

Query: 414 ALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIIN 473
              + + M      P+  TY +L+  +     +    ++YK M +  + P+  TY+++I 
Sbjct: 593 GKKLLEWMLEKNIHPNATTYNSLMKQYCIGNNMKSTTEIYKGMCSRNVEPNENTYNILIK 652

Query: 474 CLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF-- 531
              KA  ++ A     EM+ +G      +Y+ +I L  K + +  A KL+ DM+  GF  
Sbjct: 653 GHCKARSMKEAQYFHNEMIEKGFRLTASSYSALIRLLNKKKKFVEARKLFHDMRKEGFTA 712

Query: 532 EPDKVTYSI 540
           EPD   + I
Sbjct: 713 EPDVYNFYI 721


>gi|60390261|sp|Q76C99.1|RF1_ORYSI RecName: Full=Protein Rf1, mitochondrial; AltName: Full=Fertility
           restorer; AltName: Full=Protein PPR; AltName:
           Full=Restorer for CMS; Flags: Precursor
 gi|33859440|dbj|BAC77665.2| PPR protein [Oryza sativa Indica Group]
 gi|33859442|dbj|BAC77666.2| Rf1 [Oryza sativa Indica Group]
 gi|41152689|dbj|BAD08214.1| fertility restorer [Oryza sativa Indica Group]
 gi|46091159|dbj|BAD13708.1| PPR protein [Oryza sativa Indica Group]
 gi|47550657|dbj|BAD20283.1| restorer for CMS [Oryza sativa Indica Group]
          Length = 791

 Score =  151 bits (382), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 91/329 (27%), Positives = 158/329 (48%), Gaps = 35/329 (10%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           G   D  TY +++  L +A+      ++L+ MV++G  P+ +TYN ++H Y  +    EA
Sbjct: 226 GILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEA 285

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTY------ 468
           +   K+M+  G EPD VTY  L+D   K G    A  ++  M   GL P+  TY      
Sbjct: 286 IGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQG 345

Query: 469 -----------------------------SVIINCLGKAGHLQAAHQLFCEMVNQGCIPN 499
                                        S++I    K G +  A  +F +M  QG  PN
Sbjct: 346 YATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPN 405

Query: 500 LVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFA 559
            VTY  +I +  K+   + A+  +  M + G  P  + Y+ ++  L  C   + AE +  
Sbjct: 406 AVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELIL 465

Query: 560 EMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVG 619
           EM  +    +   +  ++D   K G V ++ + +E M++ G++PNV T N+L++ +   G
Sbjct: 466 EMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAG 525

Query: 620 QLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
           ++ +A  LL GM+++GLKP+  TY+ L++
Sbjct: 526 KMDEAMKLLSGMVSVGLKPNTVTYSTLIN 554



 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 101/418 (24%), Positives = 192/418 (45%), Gaps = 13/418 (3%)

Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLI 402
           A+GF   +R   G + D  TY+ ++  L +  +     K+ D M + G +P + TY  L+
Sbjct: 285 AIGFLKKMRSD-GVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLL 343

Query: 403 HSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLS 462
             Y     L E   +   M   G  PD   +  LI  +AK G +D AM ++ KM+  GL+
Sbjct: 344 QGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLN 403

Query: 463 PDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKL 522
           P+  TY  +I  L K+G ++ A   F +M+++G  P  + YN +I        ++ A +L
Sbjct: 404 PNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEEL 463

Query: 523 YRDMQNAGFEPDKVTYSIVMEVLGHC--GYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLW 580
             +M + G   + + ++ +++   HC  G + E+E +F  M R    P+   Y  L++ +
Sbjct: 464 ILEMLDRGICLNTIFFNSIID--SHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGY 521

Query: 581 GKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSL 640
             AG + +A +    M+  GL+PN  T ++L++ + ++ ++ DA  L + M + G+ P +
Sbjct: 522 CLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDI 581

Query: 641 QTYTLLLSCCTEARSPYDMGFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEM 700
            TY ++L    + R        +  +  SG    +   ++   G     + D      + 
Sbjct: 582 ITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQN 641

Query: 701 MHSEDRESKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAVKEKGMSYWLINL 758
           +   D + +    + ++D L K G  +EA  ++   +   + P+        YW   L
Sbjct: 642 LCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPN--------YWTYRL 691



 Score =  136 bits (343), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 92/328 (28%), Positives = 159/328 (48%), Gaps = 5/328 (1%)

Query: 353 QAGFKHDEHTYTTMV-GILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           + GF+ D   +T ++ G+    R   A++ +L +M   GC PNV +YN L+      N  
Sbjct: 115 KKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTELGCIPNVFSYNILLKGLCDENRS 174

Query: 412 NEALDVFKQM---QVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTY 468
            EAL++   M   +  G  PD V+Y T+I+   K G  D A   Y +M   G+ PD  TY
Sbjct: 175 QEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTY 234

Query: 469 SVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQN 528
           + II  L KA  +  A ++   MV  G +P+ +TYN ++     +   + A+   + M++
Sbjct: 235 NSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRS 294

Query: 529 AGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRK 588
            G EPD VTYS++M+ L   G   EA  +F  M ++   P+   YG L+  +   G + +
Sbjct: 295 DGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVE 354

Query: 589 AWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
                + M++ G+ P+    + L+ A+ + G++  A  +   M   GL P+  TY  ++ 
Sbjct: 355 MHGLLDLMVRNGIHPDHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIG 414

Query: 649 C-CTEARSPYDMGFCHELMAVSGHPAHM 675
             C   R    M +  +++     P ++
Sbjct: 415 ILCKSGRVEDAMLYFEQMIDEGLSPGNI 442



 Score =  122 bits (307), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 71/244 (29%), Positives = 133/244 (54%)

Query: 381 KLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIH 440
           KL + MVR G +PNV+TYN LI+ Y  A  ++EA+ +   M  VG +P+ VTY TLI+ +
Sbjct: 497 KLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGY 556

Query: 441 AKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNL 500
            K   ++ A+ ++K+M+++G+SPD  TY++I+  L +     AA +L+  +   G    L
Sbjct: 557 CKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIEL 616

Query: 501 VTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAE 560
            TYNI++    K +    AL++++++     + +  T++I+++ L   G  DEA+ +F  
Sbjct: 617 STYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVA 676

Query: 561 MRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQ 620
                 VP+   Y L+ +     G + +  + + +M   G   +    N ++   L+ G+
Sbjct: 677 FSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQRGE 736

Query: 621 LSDA 624
           ++ A
Sbjct: 737 ITRA 740



 Score =  122 bits (306), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 77/295 (26%), Positives = 142/295 (48%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           RQ G   +  TY  ++GIL ++ +        +QM+ +G  P  + YN LIH     N  
Sbjct: 398 RQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKW 457

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
             A ++  +M   G   + + + ++ID H K G +  +  +++ M   G+ P+  TY+ +
Sbjct: 458 ERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTL 517

Query: 472 INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF 531
           IN    AG +  A +L   MV+ G  PN VTY+ +I    K    + AL L+++M+++G 
Sbjct: 518 INGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGV 577

Query: 532 EPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWE 591
            PD +TY+I+++ L        A+ ++  +       +   Y +++    K      A +
Sbjct: 578 SPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQ 637

Query: 592 WYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLL 646
            ++ +    L+    T N ++ A L+VG+  +A  L     + GL P+  TY L+
Sbjct: 638 MFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLM 692



 Score =  102 bits (254), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 80/290 (27%), Positives = 132/290 (45%), Gaps = 14/290 (4%)

Query: 382 LLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCE---PDRVTYCTLID 438
           + D+++R G   ++   NR +    R +    A+  + +M   G +   PD  TY  LI 
Sbjct: 37  VFDELLRRGRGASIYGLNRALADVAR-DSPAAAVSRYNRMARAGADEVTPDLCTYGILIG 95

Query: 439 IHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFC-EMVNQGCI 497
              +AG LD+       +   G   D   ++ ++  L        A  +    M   GCI
Sbjct: 96  CCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTELGCI 155

Query: 498 PNLVTYNIMIALQAKARNYQSALKLYR---DMQNAGFEPDKVTYSIVMEVLGHCGYLDEA 554
           PN+ +YNI++         Q AL+L     D +  G  PD V+Y+ V+      G  D+A
Sbjct: 156 PNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEGDSDKA 215

Query: 555 EAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSA 614
            + + EM  +  +PD   Y  ++    KA  + KA E    M++ G+ P+  T NS+L  
Sbjct: 216 YSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHG 275

Query: 615 FLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS--C----CTEARSPYD 658
           +   GQ  +A   L+ M + G++P + TY+LL+   C    C EAR  +D
Sbjct: 276 YCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFD 325



 Score = 63.2 bits (152), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 42/165 (25%), Positives = 79/165 (47%), Gaps = 1/165 (0%)

Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLI 402
           AL  F  +   +G   D  TY  ++  L + R+  A  +L  ++   G Q  + TYN ++
Sbjct: 565 ALVLFKEME-SSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIIL 623

Query: 403 HSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLS 462
           H   +    ++AL +F+ + ++  + +  T+  +ID   K G  D A D++    + GL 
Sbjct: 624 HGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLV 683

Query: 463 PDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMI 507
           P+ +TY ++   +   G L+   QLF  M + GC  +    N ++
Sbjct: 684 PNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIV 728


>gi|449449675|ref|XP_004142590.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
           chloroplastic-like [Cucumis sativus]
          Length = 581

 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 83/290 (28%), Positives = 148/290 (51%)

Query: 359 DEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVF 418
           D ++Y  M+    +A Q  + N++ D+M   G  P+VVTYN +I S      L  A +V 
Sbjct: 130 DVYSYNAMISGFSKANQIDSANQVFDRMRSRGFSPDVVTYNIMIGSLCSRGKLELAFEVM 189

Query: 419 KQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKA 478
            ++   GC+P  +TY  LI+     G ++ A++++ ++ + GL PD +TY+ II  + K 
Sbjct: 190 DELLKDGCKPSVITYTILIEATILEGRINEALELFDELVSRGLRPDLYTYNAIIRGICKE 249

Query: 479 GHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTY 538
           G    A      +  +GC P++V+YNI++        ++   +L +DM  +G EP+ VT+
Sbjct: 250 GMEDRALDFVRHLSARGCNPDVVSYNILLRSFLNKSRWEDGERLMKDMVLSGCEPNVVTH 309

Query: 539 SIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQ 598
           SI++      G + EA  V   M+ K   PD   Y  L+  + K G +  A E+ E M+ 
Sbjct: 310 SILISSFCREGRVREAVNVLEVMKEKGLTPDSYSYDPLISAFCKEGRLDLAIEYLEKMVS 369

Query: 599 AGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
            G  P++   N++L+   + G    A  + + +  +G  P+++ Y  + S
Sbjct: 370 DGCLPDIVNYNTILATLCKFGCADLALDVFEKLDEVGCPPTVRAYNTMFS 419



 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 89/323 (27%), Positives = 152/323 (47%), Gaps = 1/323 (0%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           R  GF  D  TY  M+G L    +     +++D++++DGC+P+V+TY  LI +      +
Sbjct: 158 RSRGFSPDVVTYNIMIGSLCSRGKLELAFEVMDELLKDGCKPSVITYTILIEATILEGRI 217

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
           NEAL++F ++   G  PD  TY  +I    K G  D A+D  + + A G +PD  +Y+++
Sbjct: 218 NEALELFDELVSRGLRPDLYTYNAIIRGICKEGMEDRALDFVRHLSARGCNPDVVSYNIL 277

Query: 472 INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF 531
           +         +   +L  +MV  GC PN+VT++I+I+   +    + A+ +   M+  G 
Sbjct: 278 LRSFLNKSRWEDGERLMKDMVLSGCEPNVVTHSILISSFCREGRVREAVNVLEVMKEKGL 337

Query: 532 EPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWE 591
            PD  +Y  ++      G LD A     +M     +PD   Y  ++    K G    A +
Sbjct: 338 TPDSYSYDPLISAFCKEGRLDLAIEYLEKMVSDGCLPDIVNYNTILATLCKFGCADLALD 397

Query: 592 WYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSC-C 650
            +E + + G  P V   N++ SA    G    A  ++  M+  G+ P   TY  L+SC C
Sbjct: 398 VFEKLDEVGCPPTVRAYNTMFSALWSCGNKIKALEMISEMIRKGIDPDEITYNSLISCLC 457

Query: 651 TEARSPYDMGFCHELMAVSGHPA 673
            +      +G   ++ A    P 
Sbjct: 458 RDGLVDEAIGLLVDMEATRFQPT 480



 Score =  136 bits (343), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 87/306 (28%), Positives = 151/306 (49%), Gaps = 3/306 (0%)

Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMV-GILGRARQFGAINKLLDQMVRDGCQPNVVTYNRL 401
           AL  F+ L  + G + D +TY  ++ GI     +  A++  +  +   GC P+VV+YN L
Sbjct: 220 ALELFDELVSR-GLRPDLYTYNAIIRGICKEGMEDRALD-FVRHLSARGCNPDVVSYNIL 277

Query: 402 IHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGL 461
           + S+   +   +   + K M + GCEP+ VT+  LI    + G +  A+++ + M+  GL
Sbjct: 278 LRSFLNKSRWEDGERLMKDMVLSGCEPNVVTHSILISSFCREGRVREAVNVLEVMKEKGL 337

Query: 462 SPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALK 521
           +PD+++Y  +I+   K G L  A +   +MV+ GC+P++V YN ++A   K      AL 
Sbjct: 338 TPDSYSYDPLISAFCKEGRLDLAIEYLEKMVSDGCLPDIVNYNTILATLCKFGCADLALD 397

Query: 522 LYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWG 581
           ++  +   G  P    Y+ +   L  CG   +A  + +EM RK   PDE  Y  L+    
Sbjct: 398 VFEKLDEVGCPPTVRAYNTMFSALWSCGNKIKALEMISEMIRKGIDPDEITYNSLISCLC 457

Query: 582 KAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQ 641
           + G V +A      M     +P V + N +L    +  ++ +   LL  M+  G  P+  
Sbjct: 458 RDGLVDEAIGLLVDMEATRFQPTVISFNIVLLGMCKAHRVFEGIELLITMVEKGCLPNET 517

Query: 642 TYTLLL 647
           +Y LL+
Sbjct: 518 SYVLLI 523



 Score =  132 bits (333), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 84/297 (28%), Positives = 148/297 (49%), Gaps = 2/297 (0%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           GFK D    T ++     +R      ++++ +   G  P+V +YN +I  + +AN ++ A
Sbjct: 92  GFKPDVVLCTKLIKGFFNSRNLKKAMRVMEILETYG-DPDVYSYNAMISGFSKANQIDSA 150

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
             VF +M+  G  PD VTY  +I      G L++A ++  ++   G  P   TY+++I  
Sbjct: 151 NQVFDRMRSRGFSPDVVTYNIMIGSLCSRGKLELAFEVMDELLKDGCKPSVITYTILIEA 210

Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPD 534
               G +  A +LF E+V++G  P+L TYN +I    K      AL   R +   G  PD
Sbjct: 211 TILEGRINEALELFDELVSRGLRPDLYTYNAIIRGICKEGMEDRALDFVRHLSARGCNPD 270

Query: 535 KVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYE 594
            V+Y+I++    +    ++ E +  +M      P+   + +L+  + + G VR+A    E
Sbjct: 271 VVSYNILLRSFLNKSRWEDGERLMKDMVLSGCEPNVVTHSILISSFCREGRVREAVNVLE 330

Query: 595 AMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTY-TLLLSCC 650
            M + GL P+  + + L+SAF + G+L  A   L+ M++ G  P +  Y T+L + C
Sbjct: 331 VMKEKGLTPDSYSYDPLISAFCKEGRLDLAIEYLEKMVSDGCLPDIVNYNTILATLC 387



 Score =  129 bits (323), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 87/314 (27%), Positives = 148/314 (47%), Gaps = 4/314 (1%)

Query: 326 DAYQANQVLKQLQDHTV---ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKL 382
           D Y  N +++ +    +   AL F   L  + G   D  +Y  ++       ++    +L
Sbjct: 235 DLYTYNAIIRGICKEGMEDRALDFVRHLSAR-GCNPDVVSYNILLRSFLNKSRWEDGERL 293

Query: 383 LDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAK 442
           +  MV  GC+PNVVT++ LI S+ R   + EA++V + M+  G  PD  +Y  LI    K
Sbjct: 294 MKDMVLSGCEPNVVTHSILISSFCREGRVREAVNVLEVMKEKGLTPDSYSYDPLISAFCK 353

Query: 443 AGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVT 502
            G LD+A++  +KM + G  PD   Y+ I+  L K G    A  +F ++   GC P +  
Sbjct: 354 EGRLDLAIEYLEKMVSDGCLPDIVNYNTILATLCKFGCADLALDVFEKLDEVGCPPTVRA 413

Query: 503 YNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMR 562
           YN M +      N   AL++  +M   G +PD++TY+ ++  L   G +DEA  +  +M 
Sbjct: 414 YNTMFSALWSCGNKIKALEMISEMIRKGIDPDEITYNSLISCLCRDGLVDEAIGLLVDME 473

Query: 563 RKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLS 622
              + P    + +++    KA  V +  E    M++ G  PN  +   L+      G  +
Sbjct: 474 ATRFQPTVISFNIVLLGMCKAHRVFEGIELLITMVEKGCLPNETSYVLLIEGIAYAGWRA 533

Query: 623 DAYHLLQGMLNLGL 636
           +A  L   +  LG+
Sbjct: 534 EAMELANSLYRLGV 547


>gi|227463004|gb|ACP39954.1| pentatricopeptide repeat protein [Gossypium hirsutum]
 gi|227463006|gb|ACP39955.1| pentatricopeptide repeat protein [Gossypium hirsutum]
          Length = 547

 Score =  151 bits (381), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 91/347 (26%), Positives = 177/347 (51%), Gaps = 4/347 (1%)

Query: 311 GPLAEEALGNTNYSMDAYQANQVLKQLQDH-TVALGFFNWLRRQAGFKHDEHTYTTMVGI 369
           G  A++ L + +  +      +VLK+L +   +AL FF W  +Q GFK++  +Y  ++  
Sbjct: 107 GSHADKLLEDASIKVSPSLVVEVLKRLSNAGVIALSFFTWAEKQKGFKYNTESYNALIEA 166

Query: 370 LGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPD 429
           LG+ +QF  I  L+++M +     N  T+  +   + RA  + EA++ F++M+  G + +
Sbjct: 167 LGKIKQFKLIRSLVNEM-KSRKLLNKDTFALISRRHARARKVEEAIEAFERMEEFGFKLE 225

Query: 430 RVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFC 489
              +  L+D   K+  ++ A  ++ KM+     PD  +Y++++   GK  +L    +++ 
Sbjct: 226 TSDFNRLLDTLCKSRHVEKANKVFDKMKKRRFVPDIKSYTILLEGWGKEHNLLRLDEVYL 285

Query: 490 EMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCG 549
           EM   G  P++VTY I+I+   KA+ Y +A++L+ +M+    +P    Y  ++  LG   
Sbjct: 286 EMKYDGFEPDVVTYGILISAYCKAKKYDAAIELFHEMEAKNCKPTPHVYCTLINGLGSEK 345

Query: 550 YLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCN 609
            L EA   F   +   + P+ P Y  LV  +  +  +  A++  + M +    PN  T +
Sbjct: 346 RLSEALEFFERFKSCGFTPEAPTYNSLVGAYCWSMRIDDAFQVIDEMRKHSAGPNSRTYD 405

Query: 610 SLLSAFLRVGQLSDAYHLLQGMLNL-GLKPSLQTYTLLLSC-CTEAR 654
            +L   ++  + ++AY   Q M N  G +P++ TY +++   C E R
Sbjct: 406 IILHHLIKARRTNEAYFRFQKMSNEPGCEPTVSTYEIIVRMFCNEDR 452



 Score =  127 bits (319), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 95/370 (25%), Positives = 174/370 (47%), Gaps = 20/370 (5%)

Query: 275 SREMKIPAGLAPFSRHFASTGNVVESVSRILRQWKWGPLAEEA-----LGNTNYSMDAYQ 329
           SR++      A  SR  A    V E++    R  ++G   E +     L     S    +
Sbjct: 185 SRKLLNKDTFALISRRHARARKVEEAIEAFERMEEFGFKLETSDFNRLLDTLCKSRHVEK 244

Query: 330 ANQVLKQLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRD 389
           AN+V  +++            RR   F  D  +YT ++   G+      ++++  +M  D
Sbjct: 245 ANKVFDKMKK-----------RR---FVPDIKSYTILLEGWGKEHNLLRLDEVYLEMKYD 290

Query: 390 GCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVA 449
           G +P+VVTY  LI +Y +A   + A+++F +M+   C+P    YCTLI+       L  A
Sbjct: 291 GFEPDVVTYGILISAYCKAKKYDAAIELFHEMEAKNCKPTPHVYCTLINGLGSEKRLSEA 350

Query: 450 MDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIAL 509
           ++ +++ ++ G +P+  TY+ ++     +  +  A Q+  EM      PN  TY+I++  
Sbjct: 351 LEFFERFKSCGFTPEAPTYNSLVGAYCWSMRIDDAFQVIDEMRKHSAGPNSRTYDIILHH 410

Query: 510 QAKARNYQSALKLYRDMQNA-GFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVP 568
             KAR    A   ++ M N  G EP   TY I++ +  +   +D A+ V+ +M+ K  +P
Sbjct: 411 LIKARRTNEAYFRFQKMSNEPGCEPTVSTYEIIVRMFCNEDRVDLAKQVWDQMKAKGVLP 470

Query: 569 DEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLL 628
              +Y  L+        + +A ++++ ML AG+RP     ++L  A L  G+  +A +L 
Sbjct: 471 GMHMYSDLITSLCHKNKLGEACKYFQEMLDAGIRPPAKMFSNLKQALLDEGKNDEALNLA 530

Query: 629 QGMLNLGLKP 638
           + +  L   P
Sbjct: 531 RKINKLRGTP 540


>gi|255660858|gb|ACU25598.1| pentatricopeptide repeat-containing protein [Duranta serratifolia]
          Length = 418

 Score =  151 bits (381), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 82/279 (29%), Positives = 152/279 (54%)

Query: 370 LGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPD 429
           L + + F  +     +++  G   ++  +N ++H + +   +  A  VF  +   G  P 
Sbjct: 111 LMKLKYFKLVWDFYKEILECGYPASLYFFNIVMHRFCKEGEMRRAQSVFDAITKWGLRPS 170

Query: 430 RVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFC 489
            V++ TL++ + + G LD    +   M A+G+ PD +TYSV+IN L K   +  A++LF 
Sbjct: 171 VVSFNTLMNGYIRLGDLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKVDEANELFN 230

Query: 490 EMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCG 549
           EM+++G +PN VT+  +I +  K     SA+++Y+ M + GF PD +TY+ ++  L   G
Sbjct: 231 EMLDRGLVPNGVTFTTLIDVHCKNGMVDSAMEIYKQMLSQGFSPDLITYNTLIYGLCKKG 290

Query: 550 YLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCN 609
            L +  A+  EM      PD+  Y  L+D   K G++  A+E+ + M++  +R +     
Sbjct: 291 DLKQVRALIDEMSMNGLKPDKITYTTLIDGCCKEGDLETAFEFRKRMIKESIRLDNVAYT 350

Query: 610 SLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
           +L+S   + G+  DA  + + ML++GLKP   TYT++++
Sbjct: 351 ALVSGLCQEGRADDAEKMFREMLSVGLKPDNGTYTMIIN 389



 Score =  132 bits (332), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 77/227 (33%), Positives = 120/227 (52%)

Query: 381 KLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIH 440
           +L   M   G QP+V TY+ LI+   + + ++EA ++F +M   G  P+ VT+ TLID+H
Sbjct: 192 RLKSAMHASGVQPDVYTYSVLINGLCKESKVDEANELFNEMLDRGLVPNGVTFTTLIDVH 251

Query: 441 AKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNL 500
            K G +D AM++YK+M + G SPD  TY+ +I  L K G L+    L  EM   G  P+ 
Sbjct: 252 CKNGMVDSAMEIYKQMLSQGFSPDLITYNTLIYGLCKKGDLKQVRALIDEMSMNGLKPDK 311

Query: 501 VTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAE 560
           +TY  +I    K  + ++A +  + M       D V Y+ ++  L   G  D+AE +F E
Sbjct: 312 ITYTTLIDGCCKEGDLETAFEFRKRMIKESIRLDNVAYTALVSGLCQEGRADDAEKMFRE 371

Query: 561 MRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPT 607
           M      PD   Y ++++ + K G+VR A    + M + G  P V T
Sbjct: 372 MLSVGLKPDNGTYTMIINEFCKKGDVRTASRLLKEMQRDGHVPCVVT 418



 Score =  120 bits (302), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 74/261 (28%), Positives = 133/261 (50%)

Query: 382 LLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHA 441
           + D + + G +P+VV++N L++ Y R   L+E   +   M   G +PD  TY  LI+   
Sbjct: 158 VFDAITKWGLRPSVVSFNTLMNGYIRLGDLDEGFRLKSAMHASGVQPDVYTYSVLINGLC 217

Query: 442 KAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLV 501
           K   +D A +++ +M   GL P+  T++ +I+   K G + +A +++ +M++QG  P+L+
Sbjct: 218 KESKVDEANELFNEMLDRGLVPNGVTFTTLIDVHCKNGMVDSAMEIYKQMLSQGFSPDLI 277

Query: 502 TYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEM 561
           TYN +I    K  + +    L  +M   G +PDK+TY+ +++     G L+ A      M
Sbjct: 278 TYNTLIYGLCKKGDLKQVRALIDEMSMNGLKPDKITYTTLIDGCCKEGDLETAFEFRKRM 337

Query: 562 RRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQL 621
            +++   D   Y  LV    + G    A + +  ML  GL+P+  T   +++ F + G +
Sbjct: 338 IKESIRLDNVAYTALVSGLCQEGRADDAEKMFREMLSVGLKPDNGTYTMIINEFCKKGDV 397

Query: 622 SDAYHLLQGMLNLGLKPSLQT 642
             A  LL+ M   G  P + T
Sbjct: 398 RTASRLLKEMQRDGHVPCVVT 418



 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 77/317 (24%), Positives = 144/317 (45%), Gaps = 19/317 (5%)

Query: 356 FKHDEHTYTTMVGILGRARQFGAINKLLDQMV-RDGC-----------------QPNVVT 397
           F+H  HTY TM+  L   +       L+  +V R G                  + ++  
Sbjct: 9   FRHTLHTYCTMIHFLCTHQMLLEAKSLIRIVVSRKGKDSASAVFAAILGTKGTQRSDIYV 68

Query: 398 YNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQ 457
           ++ L+ +Y  + ++++A+  F+  +         T   +++   K  +  +  D YK++ 
Sbjct: 69  FSGLMTAYLESGFVHDAIQCFRLTKKHKFWVPFDTCRKVLEHLMKLKYFKLVWDFYKEIL 128

Query: 458 AAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQ 517
             G     + ++++++   K G ++ A  +F  +   G  P++V++N ++    +  +  
Sbjct: 129 ECGYPASLYFFNIVMHRFCKEGEMRRAQSVFDAITKWGLRPSVVSFNTLMNGYIRLGDLD 188

Query: 518 SALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLV 577
              +L   M  +G +PD  TYS+++  L     +DEA  +F EM  +  VP+   +  L+
Sbjct: 189 EGFRLKSAMHASGVQPDVYTYSVLINGLCKESKVDEANELFNEMLDRGLVPNGVTFTTLI 248

Query: 578 DLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLK 637
           D+  K G V  A E Y+ ML  G  P++ T N+L+    + G L     L+  M   GLK
Sbjct: 249 DVHCKNGMVDSAMEIYKQMLSQGFSPDLITYNTLIYGLCKKGDLKQVRALIDEMSMNGLK 308

Query: 638 PSLQTYTLLLS-CCTEA 653
           P   TYT L+  CC E 
Sbjct: 309 PDKITYTTLIDGCCKEG 325



 Score =  106 bits (265), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 61/215 (28%), Positives = 109/215 (50%)

Query: 354 AGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNE 413
           +G + D +TY+ ++  L +  +    N+L ++M+  G  PN VT+  LI  + +   ++ 
Sbjct: 200 SGVQPDVYTYSVLINGLCKESKVDEANELFNEMLDRGLVPNGVTFTTLIDVHCKNGMVDS 259

Query: 414 ALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIIN 473
           A++++KQM   G  PD +TY TLI    K G L     +  +M   GL PD  TY+ +I+
Sbjct: 260 AMEIYKQMLSQGFSPDLITYNTLIYGLCKKGDLKQVRALIDEMSMNGLKPDKITYTTLID 319

Query: 474 CLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEP 533
              K G L+ A +    M+ +    + V Y  +++   +      A K++R+M + G +P
Sbjct: 320 GCCKEGDLETAFEFRKRMIKESIRLDNVAYTALVSGLCQEGRADDAEKMFREMLSVGLKP 379

Query: 534 DKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVP 568
           D  TY++++      G +  A  +  EM+R   VP
Sbjct: 380 DNGTYTMIINEFCKKGDVRTASRLLKEMQRDGHVP 414



 Score = 92.0 bits (227), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 51/176 (28%), Positives = 94/176 (53%)

Query: 362 TYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQM 421
           T+TT++ +  +     +  ++  QM+  G  P+++TYN LI+   +   L +   +  +M
Sbjct: 243 TFTTLIDVHCKNGMVDSAMEIYKQMLSQGFSPDLITYNTLIYGLCKKGDLKQVRALIDEM 302

Query: 422 QVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHL 481
            + G +PD++TY TLID   K G L+ A +  K+M    +  D   Y+ +++ L + G  
Sbjct: 303 SMNGLKPDKITYTTLIDGCCKEGDLETAFEFRKRMIKESIRLDNVAYTALVSGLCQEGRA 362

Query: 482 QAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVT 537
             A ++F EM++ G  P+  TY ++I    K  + ++A +L ++MQ  G  P  VT
Sbjct: 363 DDAEKMFREMLSVGLKPDNGTYTMIINEFCKKGDVRTASRLLKEMQRDGHVPCVVT 418



 Score = 79.7 bits (195), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 48/148 (32%), Positives = 74/148 (50%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           GF  D  TY T++  L +      +  L+D+M  +G +P+ +TY  LI    +   L  A
Sbjct: 271 GFSPDLITYNTLIYGLCKKGDLKQVRALIDEMSMNGLKPDKITYTTLIDGCCKEGDLETA 330

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
            +  K+M       D V Y  L+    + G  D A  M+++M + GL PD  TY++IIN 
Sbjct: 331 FEFRKRMIKESIRLDNVAYTALVSGLCQEGRADDAEKMFREMLSVGLKPDNGTYTMIINE 390

Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPNLVT 502
             K G ++ A +L  EM   G +P +VT
Sbjct: 391 FCKKGDVRTASRLLKEMQRDGHVPCVVT 418


>gi|225189439|emb|CAR70003.1| pentatricopeptide repeat(PPR)-containing protein At1g12700
           [Arabidopsis thaliana]
          Length = 602

 Score =  151 bits (381), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 85/297 (28%), Positives = 157/297 (52%), Gaps = 4/297 (1%)

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
           + G++ D  T+ T++  L    +      L+D+MV +GCQP++VTYN +++   R+   +
Sbjct: 151 KLGYEPDTTTFNTLINGLCLEGKVSKAVVLVDRMVENGCQPDMVTYNSIVNGICRSGDTS 210

Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
            A D+ ++M+    + D  TY T+ID   + G +D A+ ++K+M+  G+     TY+ ++
Sbjct: 211 LAFDMLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLV 270

Query: 473 NCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFE 532
             L KAG       L  +MV++  +PN++T+N+++ +  K    Q A +LY++M   G  
Sbjct: 271 RGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGIS 330

Query: 533 PDKVTYSIVMEVLGHC--GYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAW 590
           P+ +TY+ +M+  G+C    L EA  +   M R    PD   +  L+  +     V    
Sbjct: 331 PNIITYNTLMD--GYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGM 388

Query: 591 EWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
           + +  + + GL  N  T + L+  F + G++  A  L Q M++ G+ P + TY +LL
Sbjct: 389 KVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILL 445



 Score =  148 bits (373), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 85/304 (27%), Positives = 155/304 (50%), Gaps = 2/304 (0%)

Query: 347 FNWLRR--QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHS 404
           F+ LR+  +   K D  TY+T++  L R     A   L  +M   G + +VVTYN L+  
Sbjct: 213 FDMLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRG 272

Query: 405 YGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPD 464
             +A   N+   + K M      P+ +T+  L+D+  K G L  A ++YK+M   G+SP+
Sbjct: 273 LCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPN 332

Query: 465 TFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYR 524
             TY+ +++       L  A+ +   MV   C P++VT+  +I      +     +K++R
Sbjct: 333 IITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFR 392

Query: 525 DMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAG 584
           ++   G   + VTYSI+++     G +  AE +F EM     +PD   YG+L+D     G
Sbjct: 393 NISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNG 452

Query: 585 NVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYT 644
            + KA E +E + ++ +   +    +++    + G++ DA++L   +   G+KP++ TYT
Sbjct: 453 KLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYT 512

Query: 645 LLLS 648
           +++S
Sbjct: 513 VMIS 516



 Score =  135 bits (339), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 81/309 (26%), Positives = 154/309 (49%), Gaps = 11/309 (3%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           G  H+ +T   M+    R  +      +L ++++ G +P+  T+N LI+       +++A
Sbjct: 118 GIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLINGLCLEGKVSKA 177

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
           + +  +M   GC+PD VTY ++++   ++G   +A DM +KM+   +  D FTYS II+ 
Sbjct: 178 VVLVDRMVENGCQPDMVTYNSIVNGICRSGDTSLAFDMLRKMEERNVKADVFTYSTIIDS 237

Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPD 534
           L + G + AA  LF EM  +G   ++VTYN ++    KA  +     L +DM +    P+
Sbjct: 238 LCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPN 297

Query: 535 KVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYE 594
            +T++++++V    G L EA  ++ EM  +   P+   Y  L+D +     + +A    +
Sbjct: 298 VITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLD 357

Query: 595 AMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEAR 654
            M++    P++ T  SL+  +  V ++ D   + + +   GL  +  TY++L+       
Sbjct: 358 LMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQ------ 411

Query: 655 SPYDMGFCH 663
                GFC 
Sbjct: 412 -----GFCQ 415



 Score =  132 bits (333), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 74/275 (26%), Positives = 144/275 (52%)

Query: 362 TYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQM 421
           T+  ++ +  +  +    N+L  +M+  G  PN++TYN L+  Y   N L+EA ++   M
Sbjct: 300 TFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLM 359

Query: 422 QVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHL 481
               C PD VT+ +LI  +     +D  M +++ +   GL  +  TYS+++    ++G +
Sbjct: 360 VRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKI 419

Query: 482 QAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIV 541
           + A +LF EMV+ G +P+++TY I++         + AL+++ D+Q +  +   V Y+ +
Sbjct: 420 KLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTI 479

Query: 542 MEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGL 601
           +E +   G +++A  +F  +  K   P+   Y +++    K G++ +A      M + G 
Sbjct: 480 IEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGN 539

Query: 602 RPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGL 636
            PN  T N+L+ A LR G L+ +  L++ M + G 
Sbjct: 540 APNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGF 574



 Score =  128 bits (322), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 89/329 (27%), Positives = 164/329 (49%), Gaps = 4/329 (1%)

Query: 322 NYSMDAYQANQVLKQL-QDHTV--ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGA 378
           N   D +  + ++  L +D  +  A+  F  +  + G K    TY ++V  L +A ++  
Sbjct: 223 NVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETK-GIKSSVVTYNSLVRGLCKAGKWND 281

Query: 379 INKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLID 438
              LL  MV     PNV+T+N L+  + +   L EA +++K+M   G  P+ +TY TL+D
Sbjct: 282 GALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMD 341

Query: 439 IHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIP 498
            +     L  A +M   M     SPD  T++ +I        +    ++F  +  +G + 
Sbjct: 342 GYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVA 401

Query: 499 NLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVF 558
           N VTY+I++    ++   + A +L+++M + G  PD +TY I+++ L   G L++A  +F
Sbjct: 402 NAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIF 461

Query: 559 AEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRV 618
            ++++        +Y  +++   K G V  AW  + ++   G++PNV T   ++S   + 
Sbjct: 462 EDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKK 521

Query: 619 GQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
           G LS+A  LL+ M   G  P+  TY  L+
Sbjct: 522 GSLSEANILLRKMEEDGNAPNDCTYNTLI 550



 Score =  122 bits (305), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 71/278 (25%), Positives = 141/278 (50%)

Query: 370 LGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPD 429
           + R +QF  +     Q+  +G   N+ T N +I+ + R      A  V  ++  +G EPD
Sbjct: 98  IARTKQFNLVLDFCKQLELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPD 157

Query: 430 RVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFC 489
             T+ TLI+     G +  A+ +  +M   G  PD  TY+ I+N + ++G    A  +  
Sbjct: 158 TTTFNTLINGLCLEGKVSKAVVLVDRMVENGCQPDMVTYNSIVNGICRSGDTSLAFDMLR 217

Query: 490 EMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCG 549
           +M  +    ++ TY+ +I    +     +A+ L+++M+  G +   VTY+ ++  L   G
Sbjct: 218 KMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAG 277

Query: 550 YLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCN 609
             ++   +  +M  +  VP+   + +L+D++ K G +++A E Y+ M+  G+ PN+ T N
Sbjct: 278 KWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYN 337

Query: 610 SLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
           +L+  +    +LS+A ++L  M+     P + T+T L+
Sbjct: 338 TLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLI 375



 Score =  120 bits (301), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 97/377 (25%), Positives = 161/377 (42%), Gaps = 24/377 (6%)

Query: 382 LLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHA 441
           L  +M+R    P +V ++R   +  R    N  LD  KQ+++ G   +  T   +I+   
Sbjct: 75  LFQEMIRSRPLPGLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMINCFC 134

Query: 442 KAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLV 501
           +      A  +  K+   G  PDT T++ +IN L   G +  A  L   MV  GC P++V
Sbjct: 135 RCCKTCFAYSVLGKVMKLGYEPDTTTFNTLINGLCLEGKVSKAVVLVDRMVENGCQPDMV 194

Query: 502 TYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEM 561
           TYN ++    ++ +   A  + R M+    + D  TYS +++ L   G +D A ++F EM
Sbjct: 195 TYNSIVNGICRSGDTSLAFDMLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEM 254

Query: 562 RRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQL 621
             K        Y  LV    KAG         + M+   + PNV T N LL  F++ G+L
Sbjct: 255 ETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKL 314

Query: 622 SDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGFCHELMAVSGHPAHMFLLSMP 681
            +A  L + M+  G+ P++ TY  L+            G+C +   +S     + L+   
Sbjct: 315 QEANELYKEMITRGISPNIITYNTLMD-----------GYCMQ-NRLSEANNMLDLMVRN 362

Query: 682 SPGPDGQNVRDHVGSFLEMMHSED------RESKRGLVDAVVDF------LHKSGLKEEA 729
              PD       +  +  +   +D        SKRGLV   V +        +SG  + A
Sbjct: 363 KCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLA 422

Query: 730 GSVWEVAAQKNVYPDAV 746
             +++      V PD +
Sbjct: 423 EELFQEMVSHGVLPDVM 439



 Score =  107 bits (268), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 62/264 (23%), Positives = 127/264 (48%), Gaps = 1/264 (0%)

Query: 362 TYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQM 421
           TY T++       +    N +LD MVR+ C P++VT+  LI  Y     +++ + VF+ +
Sbjct: 335 TYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNI 394

Query: 422 QVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHL 481
              G   + VTY  L+    ++G + +A +++++M + G+ PD  TY ++++ L   G L
Sbjct: 395 SKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKL 454

Query: 482 QAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIV 541
           + A ++F ++        +V Y  +I    K    + A  L+  +   G +P+ +TY+++
Sbjct: 455 EKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVM 514

Query: 542 MEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGL 601
           +  L   G L EA  +  +M      P++  Y  L+    + G++  + +  E M   G 
Sbjct: 515 ISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGF 574

Query: 602 RPNVPTCNSLLSAFLRVGQLSDAY 625
             +  +   ++   L  G+L  ++
Sbjct: 575 SADASSIKMVIDMLLS-GELDKSF 597



 Score = 57.8 bits (138), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 48/236 (20%), Positives = 102/236 (43%), Gaps = 35/236 (14%)

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
           ++A+ +F++M      P  V +       A+    ++ +D  K+++  G++ + +T +++
Sbjct: 70  DDAIALFQEMIRSRPLPGLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIM 129

Query: 472 INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF 531
           INC             FC      C      Y+++             +KL       G+
Sbjct: 130 INC-------------FCR-----CCKTCFAYSVL----------GKVMKL-------GY 154

Query: 532 EPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWE 591
           EPD  T++ ++  L   G + +A  +   M      PD   Y  +V+   ++G+   A++
Sbjct: 155 EPDTTTFNTLINGLCLEGKVSKAVVLVDRMVENGCQPDMVTYNSIVNGICRSGDTSLAFD 214

Query: 592 WYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
               M +  ++ +V T ++++ +  R G +  A  L + M   G+K S+ TY  L+
Sbjct: 215 MLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLV 270



 Score = 43.9 bits (102), Expect = 0.42,   Method: Compositional matrix adjust.
 Identities = 30/98 (30%), Positives = 45/98 (45%), Gaps = 4/98 (4%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           G K +  TYT M+  L +       N LL +M  DG  PN  TYN LI ++ R   L  +
Sbjct: 503 GVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTAS 562

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDI----HAKAGFLDV 448
             + ++M+  G   D  +   +ID+         FLD+
Sbjct: 563 AKLIEEMKSCGFSADASSIKMVIDMLLSGELDKSFLDM 600


>gi|226528493|ref|NP_001147073.1| ATP binding protein [Zea mays]
 gi|195607078|gb|ACG25369.1| ATP binding protein [Zea mays]
          Length = 655

 Score =  151 bits (381), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 83/293 (28%), Positives = 149/293 (50%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           G K +   Y T++  L  A ++    +LL +M    C  + VT+N L+  + +   ++  
Sbjct: 327 GLKPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRV 386

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
           +++ +QM V GC PD +TY T+I+   K G +D A+ + K M A G  P+T +Y++++  
Sbjct: 387 IELLEQMLVHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKG 446

Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPD 534
           L  A     A  L  +M+ QGC  N +T+N +I    K    + A++L + M   G  PD
Sbjct: 447 LCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIELLKQMLVNGCSPD 506

Query: 535 KVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYE 594
            ++YS V++ LG  G  DEA  +   M  K   P+  +Y  +     + G + K  + ++
Sbjct: 507 LISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSREGRINKVIQMFD 566

Query: 595 AMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
            +    +R +    N+++S+  + G+   A   L  M++ G  P+  TYT+L+
Sbjct: 567 NIQDTTIRSDAVLYNAVISSLCKRGETERAIEFLAYMVSSGCVPNESTYTILI 619



 Score =  140 bits (353), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 93/334 (27%), Positives = 153/334 (45%), Gaps = 2/334 (0%)

Query: 316 EALGNTNYSMDAYQANQVLKQLQDHTVALGFFNWLRRQAGF--KHDEHTYTTMVGILGRA 373
           E L     ++D    N VL  + D        + LR    F  + D  +Y  ++  L  A
Sbjct: 181 EDLHARGCALDVGNCNLVLNAICDQGSVDKALHLLRDLPSFGCEPDVVSYNAVLKGLCMA 240

Query: 374 RQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTY 433
           +++G + +L+++MVR  C PN+VT+N LI    R        +V  QM   GC PD   Y
Sbjct: 241 KRWGCVQELMEEMVRMACPPNIVTFNTLISYLCRNGLFERVHEVLAQMAEHGCTPDIRMY 300

Query: 434 CTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVN 493
            T+ID   K G L VA ++  +M + GL P+   Y+ ++  L  A   +   +L  EM +
Sbjct: 301 ATIIDGICKEGHLKVAHEILNRMPSYGLKPNVVCYNTLLKGLCSAERWEETEELLAEMFD 360

Query: 494 QGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDE 553
           + C  + VT+NI++    +       ++L   M   G  PD +TY+ V+      G +DE
Sbjct: 361 KDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLVHGCMPDVITYTTVINGFCKEGLIDE 420

Query: 554 AEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLS 613
           A  +   M      P+   Y +++     A     A +    M+Q G   N  T N+L++
Sbjct: 421 AVMLLKSMTACGCKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLIN 480

Query: 614 AFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
              + G +  A  LL+ ML  G  P L +Y+ ++
Sbjct: 481 FLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVI 514



 Score =  124 bits (310), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 72/277 (25%), Positives = 135/277 (48%)

Query: 359 DEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVF 418
           D+ T+  +V    +      + +LL+QM+  GC P+V+TY  +I+ + +   ++EA+ + 
Sbjct: 366 DDVTFNILVDFFCQNGLVDRVIELLEQMLVHGCMPDVITYTTVINGFCKEGLIDEAVMLL 425

Query: 419 KQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKA 478
           K M   GC+P+ ++Y  ++     A     A D+  +M   G   +  T++ +IN L K 
Sbjct: 426 KSMTACGCKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKK 485

Query: 479 GHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTY 538
           G ++ A +L  +M+  GC P+L++Y+ +I    KA     AL+L   M N G  P+ + Y
Sbjct: 486 GLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIY 545

Query: 539 SIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQ 598
           S +   L   G +++   +F  ++      D  +Y  ++    K G   +A E+   M+ 
Sbjct: 546 SSIASALSREGRINKVIQMFDNIQDTTIRSDAVLYNAVISSLCKRGETERAIEFLAYMVS 605

Query: 599 AGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLG 635
           +G  PN  T   L+      G + +A  +L  + + G
Sbjct: 606 SGCVPNESTYTILIRGLASEGFVKEAQEMLTELCSKG 642



 Score =  123 bits (308), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 92/404 (22%), Positives = 179/404 (44%), Gaps = 1/404 (0%)

Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLI 402
           AL   + + R+ G       Y  ++    R   F +  ++L+ +   GC  +V   N ++
Sbjct: 141 ALAVLDEMPRR-GCAPIPPMYHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVL 199

Query: 403 HSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLS 462
           ++      +++AL + + +   GCEPD V+Y  ++     A       ++ ++M      
Sbjct: 200 NAICDQGSVDKALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACP 259

Query: 463 PDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKL 522
           P+  T++ +I+ L + G  +  H++  +M   GC P++  Y  +I    K  + + A ++
Sbjct: 260 PNIVTFNTLISYLCRNGLFERVHEVLAQMAEHGCTPDIRMYATIIDGICKEGHLKVAHEI 319

Query: 523 YRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGK 582
              M + G +P+ V Y+ +++ L      +E E + AEM  K+   D+  + +LVD + +
Sbjct: 320 LNRMPSYGLKPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQ 379

Query: 583 AGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQT 642
            G V +  E  E ML  G  P+V T  ++++ F + G + +A  LL+ M   G KP+  +
Sbjct: 380 NGLVDRVIELLEQMLVHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTIS 439

Query: 643 YTLLLSCCTEARSPYDMGFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMH 702
           YT++L     A    D       M   G P +    +        + + +     L+ M 
Sbjct: 440 YTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIELLKQML 499

Query: 703 SEDRESKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAV 746
                        V+D L K+G  +EA  +  V   K + P+ +
Sbjct: 500 VNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTI 543



 Score =  120 bits (301), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 71/246 (28%), Positives = 118/246 (47%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           G   D  TYTT++    +         LL  M   GC+PN ++Y  ++     A    +A
Sbjct: 397 GCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLCSAERWVDA 456

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
            D+  QM   GC  + +T+ TLI+   K G ++ A+++ K+M   G SPD  +YS +I+ 
Sbjct: 457 EDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDG 516

Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPD 534
           LGKAG    A +L   MVN+G  PN + Y+ + +  ++       ++++ ++Q+     D
Sbjct: 517 LGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSREGRINKVIQMFDNIQDTTIRSD 576

Query: 535 KVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYE 594
            V Y+ V+  L   G  + A    A M     VP+E  Y +L+      G V++A E   
Sbjct: 577 AVLYNAVISSLCKRGETERAIEFLAYMVSSGCVPNESTYTILIRGLASEGFVKEAQEMLT 636

Query: 595 AMLQAG 600
            +   G
Sbjct: 637 ELCSKG 642



 Score = 96.7 bits (239), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 109/493 (22%), Positives = 189/493 (38%), Gaps = 79/493 (16%)

Query: 363 YTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQ 422
           Y  MV    RA Q  +  +L   +      PN  TY  ++ +      + +AL V  +M 
Sbjct: 93  YNAMVAGYCRAGQLESARRLAAAV---PVPPNAYTYFPVVRALCARGRIADALAVLDEMP 149

Query: 423 VVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQ 482
             GC P    Y  +++   + G    A+ + + + A G + D    ++++N +   G + 
Sbjct: 150 RRGCAPIPPMYHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSVD 209

Query: 483 AAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVM 542
            A  L  ++ + GC P++V+YN ++     A+ +    +L  +M      P+ VT++ ++
Sbjct: 210 KALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLI 269

Query: 543 EVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLR 602
             L   G  +    V A+M      PD  +Y  ++D   K G+++ A E    M   GL+
Sbjct: 270 SYLCRNGLFERVHEVLAQMAEHGCTPDIRMYATIIDGICKEGHLKVAHEILNRMPSYGLK 329

Query: 603 PNVPTCNSLLSA-----------------------------------FLRVGQLSDAYHL 627
           PNV   N+LL                                     F + G +     L
Sbjct: 330 PNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIEL 389

Query: 628 LQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGFCHELMAVSGHPAHMFLLSMPSPGPDG 687
           L+ ML  G  P + TYT +++           GFC E +      A M L SM + G   
Sbjct: 390 LEQMLVHGCMPDVITYTTVIN-----------GFCKEGLI---DEAVMLLKSMTACGCKP 435

Query: 688 QN-----VRDHVGSFLEMMHSEDRES---KRGL------VDAVVDFLHKSGLKEEAGSVW 733
                  V   + S    + +ED  S   ++G        + +++FL K GL E+A  + 
Sbjct: 436 NTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIELL 495

Query: 734 EVAAQKNVYPDAVKEKGMSYWLINLHVMSDGTAVIALSRTLAWFRKQMLISGVGPSRI-- 791
           +        PD          LI+   + DG      +         M+  G+ P+ I  
Sbjct: 496 KQMLVNGCSPD----------LISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIY 545

Query: 792 -DIVTGWGRRSRV 803
             I +   R  R+
Sbjct: 546 SSIASALSREGRI 558



 Score = 95.1 bits (235), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 60/212 (28%), Positives = 100/212 (47%), Gaps = 35/212 (16%)

Query: 354 AGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNE 413
            G K +  +YT ++  L  A ++     L+ QM++ GC  N +T+N LI+   +   + +
Sbjct: 431 CGCKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQ 490

Query: 414 ALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIIN 473
           A+++ KQM V GC PD ++Y T+ID   KAG  D A+++   M   G+SP+T  YS I +
Sbjct: 491 AIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIAS 550

Query: 474 CLGKAGHLQAAHQLF----------------------CE-------------MVNQGCIP 498
            L + G +    Q+F                      C+             MV+ GC+P
Sbjct: 551 ALSREGRINKVIQMFDNIQDTTIRSDAVLYNAVISSLCKRGETERAIEFLAYMVSSGCVP 610

Query: 499 NLVTYNIMIALQAKARNYQSALKLYRDMQNAG 530
           N  TY I+I   A     + A ++  ++ + G
Sbjct: 611 NESTYTILIRGLASEGFVKEAQEMLTELCSKG 642


>gi|255580475|ref|XP_002531063.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223529358|gb|EEF31324.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 533

 Score =  151 bits (381), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 94/389 (24%), Positives = 191/389 (49%), Gaps = 7/389 (1%)

Query: 294 TGNVVESVSRILRQWKWGPLA--EEALGNTNYSMDAYQANQVLKQLQDH-TVALGFFNWL 350
           T  ++E    I R     P +  E+ L   ++ +      +VLK+L +   +AL FF W 
Sbjct: 78  TDKIIEDTRNICRLLSKNPNSSIEKLLLGASFKVSPALVLEVLKRLSNAGALALSFFKWA 137

Query: 351 RRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANY 410
            +Q GF ++  +Y  ++  LG+ +QF  I  L++ M R G      T+  +   Y R+  
Sbjct: 138 EKQKGFMYNTESYNALIDSLGKIKQFNMIWNLVNDMKRKGVLTKE-TFALISRRYARSGK 196

Query: 411 LNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSV 470
           + EA++ F++M+  G + +   +  L+D   K+  +  A +++ KM+     PD  +Y++
Sbjct: 197 VKEAMNTFEKMEKFGLKIESTDFNRLLDTLIKSRQVLSAQNVFDKMKIRRFVPDIKSYTI 256

Query: 471 IINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAG 530
           ++   G+  +L    +++ EM ++G  P++VTY I+I    K R Y  A++L+R+M++  
Sbjct: 257 LLEGWGQEKNLLKLDEVYREMKDEGFEPDVVTYGILINAYCKVRKYDDAIELFREMESKN 316

Query: 531 FEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAW 590
            +P    +  ++  LG    L EA   F   +   + P+ P Y  +V  +  +  +  A+
Sbjct: 317 CQPSPHIFCTLINGLGSVRRLSEALEFFRRSKASGFAPETPTYNAVVGAYCWSMRIDDAY 376

Query: 591 EWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLN-LGLKPSLQTYTLLLSC 649
              + M ++G+ PN  T + +L   ++  + ++A+ + + M +    +P++ TY +++  
Sbjct: 377 RMVDEMRKSGVGPNSRTYDIILHHLIKAEKTTEAFSVFEKMSSEEECEPTVSTYDIIVRM 436

Query: 650 -CTEARSPYDMGFCHELMAVSGHPA-HMF 676
            C   +    +     + A   HP  HMF
Sbjct: 437 FCNMDKVESAIKVWDRMKAKGVHPGMHMF 465



 Score =  123 bits (308), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 86/357 (24%), Positives = 174/357 (48%), Gaps = 12/357 (3%)

Query: 284 LAPFSRHFASTGNVVESVSRILRQWKWGPLAEEALGNTNYSMDAY-QANQVLKQLQDHTV 342
            A  SR +A +G V E+++   +  K+G   E    + N  +D   ++ QVL        
Sbjct: 184 FALISRRYARSGKVKEAMNTFEKMEKFGLKIEST--DFNRLLDTLIKSRQVLS------- 234

Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLI 402
           A   F+ ++ +  F  D  +YT ++   G+ +    ++++  +M  +G +P+VVTY  LI
Sbjct: 235 AQNVFDKMKIRR-FVPDIKSYTILLEGWGQEKNLLKLDEVYREMKDEGFEPDVVTYGILI 293

Query: 403 HSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLS 462
           ++Y +    ++A+++F++M+   C+P    +CTLI+       L  A++ +++ +A+G +
Sbjct: 294 NAYCKVRKYDDAIELFREMESKNCQPSPHIFCTLINGLGSVRRLSEALEFFRRSKASGFA 353

Query: 463 PDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKL 522
           P+T TY+ ++     +  +  A+++  EM   G  PN  TY+I++    KA     A  +
Sbjct: 354 PETPTYNAVVGAYCWSMRIDDAYRMVDEMRKSGVGPNSRTYDIILHHLIKAEKTTEAFSV 413

Query: 523 YRDMQNAG-FEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWG 581
           +  M +    EP   TY I++ +  +   ++ A  V+  M+ K   P   ++ +L++   
Sbjct: 414 FEKMSSEEECEPTVSTYDIIVRMFCNMDKVESAIKVWDRMKAKGVHPGMHMFSILINSLC 473

Query: 582 KAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKP 638
               +  A ++++ ML  G+RP     + L  A +  G+      L Q +  L   P
Sbjct: 474 HENKLDIACKYFQEMLDVGIRPPAALFSHLKQALIEDGRKDTVVLLAQKIDKLRKTP 530


>gi|356551942|ref|XP_003544331.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
           mitochondrial-like [Glycine max]
          Length = 545

 Score =  151 bits (381), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 93/326 (28%), Positives = 165/326 (50%), Gaps = 2/326 (0%)

Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLI 402
           AL F + +  Q GF+    +Y  ++  + +  +  A  +LL ++ R   +PNVV Y+ +I
Sbjct: 147 ALRFHDKVLAQ-GFRLSGISYGILINGVCKIGETRAAIRLLRRIERWSIRPNVVIYSMII 205

Query: 403 HSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLS 462
               +   ++EA D++ +M   G  PD VTY  L+      G L+ A+D+  +M    ++
Sbjct: 206 DRLCKDTLVDEAYDLYTEMVGKGISPDVVTYSILVSGFCIVGQLNRAIDLLNEMVLENIN 265

Query: 463 PDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKL 522
           PD +TY+++++ L K G ++ A  +   MV      ++V Y+ ++          +A ++
Sbjct: 266 PDIYTYTILVDALCKEGKVKEAENVLAVMVKACVNLDVVVYSTLMDGYCLVNEVNNAKRV 325

Query: 523 YRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGK 582
           +  M   G  PD   YSI++  L     +DEA  +F E+ +KN VPD   Y  L+D   K
Sbjct: 326 FYTMTQMGVTPDVHCYSIMINGLCKIKRVDEALNLFEEIHQKNMVPDTVTYTSLIDCLCK 385

Query: 583 AGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQT 642
           +G +   W+ ++ ML  G  P+V T N+L+ A  + G L  A  L   M +  ++P++ T
Sbjct: 386 SGRISYVWDLFDEMLDRGQPPDVITYNNLIDALCKNGHLDRAIALFNKMKDQAIRPNVYT 445

Query: 643 YTLLLS-CCTEARSPYDMGFCHELMA 667
           +T+LL   C   R    + F  +L+ 
Sbjct: 446 FTILLDGLCKVGRLKNALEFFQDLLT 471



 Score =  131 bits (329), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 80/286 (27%), Positives = 136/286 (47%)

Query: 363 YTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQ 422
           Y+ ++  L +         L  +MV  G  P+VVTY+ L+  +     LN A+D+  +M 
Sbjct: 201 YSMIIDRLCKDTLVDEAYDLYTEMVGKGISPDVVTYSILVSGFCIVGQLNRAIDLLNEMV 260

Query: 423 VVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQ 482
           +    PD  TY  L+D   K G +  A ++   M  A ++ D   YS +++       + 
Sbjct: 261 LENINPDIYTYTILVDALCKEGKVKEAENVLAVMVKACVNLDVVVYSTLMDGYCLVNEVN 320

Query: 483 AAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVM 542
            A ++F  M   G  P++  Y+IMI    K +    AL L+ ++      PD VTY+ ++
Sbjct: 321 NAKRVFYTMTQMGVTPDVHCYSIMINGLCKIKRVDEALNLFEEIHQKNMVPDTVTYTSLI 380

Query: 543 EVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLR 602
           + L   G +     +F EM  +   PD   Y  L+D   K G++ +A   +  M    +R
Sbjct: 381 DCLCKSGRISYVWDLFDEMLDRGQPPDVITYNNLIDALCKNGHLDRAIALFNKMKDQAIR 440

Query: 603 PNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
           PNV T   LL    +VG+L +A    Q +L  G   +++TYT++++
Sbjct: 441 PNVYTFTILLDGLCKVGRLKNALEFFQDLLTKGYCLNVRTYTVMIN 486



 Score =  120 bits (300), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 79/293 (26%), Positives = 141/293 (48%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           G   D  TY+ +V       Q      LL++MV +   P++ TY  L+ +  +   + EA
Sbjct: 228 GISPDVVTYSILVSGFCIVGQLNRAIDLLNEMVLENINPDIYTYTILVDALCKEGKVKEA 287

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
            +V   M       D V Y TL+D +     ++ A  ++  M   G++PD   YS++IN 
Sbjct: 288 ENVLAVMVKACVNLDVVVYSTLMDGYCLVNEVNNAKRVFYTMTQMGVTPDVHCYSIMING 347

Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPD 534
           L K   +  A  LF E+  +  +P+ VTY  +I    K+        L+ +M + G  PD
Sbjct: 348 LCKIKRVDEALNLFEEIHQKNMVPDTVTYTSLIDCLCKSGRISYVWDLFDEMLDRGQPPD 407

Query: 535 KVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYE 594
            +TY+ +++ L   G+LD A A+F +M+ +   P+   + +L+D   K G ++ A E+++
Sbjct: 408 VITYNNLIDALCKNGHLDRAIALFNKMKDQAIRPNVYTFTILLDGLCKVGRLKNALEFFQ 467

Query: 595 AMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
            +L  G   NV T   +++   + G L +A  L   M + G      T+ +++
Sbjct: 468 DLLTKGYCLNVRTYTVMINGLCKEGLLDEALALQSRMEDNGCISDAVTFEIMI 520



 Score =  118 bits (296), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 75/278 (26%), Positives = 137/278 (49%)

Query: 359 DEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVF 418
           D +TYT +V  L +  +      +L  MV+     +VV Y+ L+  Y   N +N A  VF
Sbjct: 267 DIYTYTILVDALCKEGKVKEAENVLAVMVKACVNLDVVVYSTLMDGYCLVNEVNNAKRVF 326

Query: 419 KQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKA 478
             M  +G  PD   Y  +I+   K   +D A+++++++    + PDT TY+ +I+CL K+
Sbjct: 327 YTMTQMGVTPDVHCYSIMINGLCKIKRVDEALNLFEEIHQKNMVPDTVTYTSLIDCLCKS 386

Query: 479 GHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTY 538
           G +     LF EM+++G  P+++TYN +I    K  +   A+ L+  M++    P+  T+
Sbjct: 387 GRISYVWDLFDEMLDRGQPPDVITYNNLIDALCKNGHLDRAIALFNKMKDQAIRPNVYTF 446

Query: 539 SIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQ 598
           +I+++ L   G L  A   F ++  K +  +   Y ++++   K G + +A      M  
Sbjct: 447 TILLDGLCKVGRLKNALEFFQDLLTKGYCLNVRTYTVMINGLCKEGLLDEALALQSRMED 506

Query: 599 AGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGL 636
            G   +  T   ++ AF    +   A  L++ M+  GL
Sbjct: 507 NGCISDAVTFEIMIRAFFDKDENDKAEKLVREMIARGL 544



 Score =  114 bits (284), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 82/312 (26%), Positives = 146/312 (46%), Gaps = 4/312 (1%)

Query: 350 LRRQAGFKHDEHTYTTMVGILGRARQFGAINKL---LDQMVRDGCQPNVVTYNRLIHSYG 406
           L +Q      E  Y T+  I+     FG +      + ++++ G QPN +T N L+    
Sbjct: 80  LYKQMELSEVEPDYFTLNIIINCFCHFGQVVLAFSGVSKILKLGYQPNTITLNTLMKGLC 139

Query: 407 RANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTF 466
               + EAL    ++   G     ++Y  LI+   K G    A+ + ++++   + P+  
Sbjct: 140 LEGKVKEALRFHDKVLAQGFRLSGISYGILINGVCKIGETRAAIRLLRRIERWSIRPNVV 199

Query: 467 TYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDM 526
            YS+II+ L K   +  A+ L+ EMV +G  P++VTY+I+++          A+ L  +M
Sbjct: 200 IYSMIIDRLCKDTLVDEAYDLYTEMVGKGISPDVVTYSILVSGFCIVGQLNRAIDLLNEM 259

Query: 527 QNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNV 586
                 PD  TY+I+++ L   G + EAE V A M +     D  VY  L+D +     V
Sbjct: 260 VLENINPDIYTYTILVDALCKEGKVKEAENVLAVMVKACVNLDVVVYSTLMDGYCLVNEV 319

Query: 587 RKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLL 646
             A   +  M Q G+ P+V   + +++   ++ ++ +A +L + +    + P   TYT L
Sbjct: 320 NNAKRVFYTMTQMGVTPDVHCYSIMINGLCKIKRVDEALNLFEEIHQKNMVPDTVTYTSL 379

Query: 647 LSC-CTEARSPY 657
           + C C   R  Y
Sbjct: 380 IDCLCKSGRISY 391



 Score =  106 bits (265), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 78/306 (25%), Positives = 143/306 (46%), Gaps = 1/306 (0%)

Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLI 402
           A+  FN +       H  H    ++ ++   R   AI+ L  QM     +P+  T N +I
Sbjct: 42  AVSQFNHMFHVHPTPHTFHFNKILISLVNVKRYPTAIS-LYKQMELSEVEPDYFTLNIII 100

Query: 403 HSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLS 462
           + +     +  A     ++  +G +P+ +T  TL+      G +  A+  + K+ A G  
Sbjct: 101 NCFCHFGQVVLAFSGVSKILKLGYQPNTITLNTLMKGLCLEGKVKEALRFHDKVLAQGFR 160

Query: 463 PDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKL 522
               +Y ++IN + K G  +AA +L   +      PN+V Y+++I    K      A  L
Sbjct: 161 LSGISYGILINGVCKIGETRAAIRLLRRIERWSIRPNVVIYSMIIDRLCKDTLVDEAYDL 220

Query: 523 YRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGK 582
           Y +M   G  PD VTYSI++      G L+ A  +  EM  +N  PD   Y +LVD   K
Sbjct: 221 YTEMVGKGISPDVVTYSILVSGFCIVGQLNRAIDLLNEMVLENINPDIYTYTILVDALCK 280

Query: 583 AGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQT 642
            G V++A      M++A +  +V   ++L+  +  V ++++A  +   M  +G+ P +  
Sbjct: 281 EGKVKEAENVLAVMVKACVNLDVVVYSTLMDGYCLVNEVNNAKRVFYTMTQMGVTPDVHC 340

Query: 643 YTLLLS 648
           Y+++++
Sbjct: 341 YSIMIN 346



 Score =  102 bits (255), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 61/209 (29%), Positives = 106/209 (50%)

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
           Q G   D H Y+ M+  L + ++      L +++ +    P+ VTY  LI    ++  ++
Sbjct: 331 QMGVTPDVHCYSIMINGLCKIKRVDEALNLFEEIHQKNMVPDTVTYTSLIDCLCKSGRIS 390

Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
              D+F +M   G  PD +TY  LID   K G LD A+ ++ KM+   + P+ +T+++++
Sbjct: 391 YVWDLFDEMLDRGQPPDVITYNNLIDALCKNGHLDRAIALFNKMKDQAIRPNVYTFTILL 450

Query: 473 NCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFE 532
           + L K G L+ A + F +++ +G   N+ TY +MI    K      AL L   M++ G  
Sbjct: 451 DGLCKVGRLKNALEFFQDLLTKGYCLNVRTYTVMINGLCKEGLLDEALALQSRMEDNGCI 510

Query: 533 PDKVTYSIVMEVLGHCGYLDEAEAVFAEM 561
            D VT+ I++         D+AE +  EM
Sbjct: 511 SDAVTFEIMIRAFFDKDENDKAEKLVREM 539


>gi|225459022|ref|XP_002285611.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like isoform 1 [Vitis vinifera]
          Length = 610

 Score =  151 bits (381), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 92/297 (30%), Positives = 149/297 (50%), Gaps = 2/297 (0%)

Query: 352 RQAGFKHDEHTYTTMV-GILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANY 410
           R  G K D  TY  ++ GI    R   AI K L+ M   GCQPNV+T+N ++ S      
Sbjct: 278 RNKGSKPDVVTYNVLINGICKEGRLDEAI-KFLNNMPSYGCQPNVITHNIILRSMCSTGR 336

Query: 411 LNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSV 470
             +A  +   M   GC P  VT+  LI+   + G L  A+D+ +KM   G +P++ +Y+ 
Sbjct: 337 WMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNP 396

Query: 471 IINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAG 530
           +++   K   +  A +    MV++GC P++VTYN ++    K      A+++   + + G
Sbjct: 397 LLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKG 456

Query: 531 FEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAW 590
             P  +TY+ V++ L   G  + A  +  EMRRK   PD   Y  LV    + G V +A 
Sbjct: 457 CSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAI 516

Query: 591 EWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
           +++  +   G+RPN  T NS++    +  Q   A   L  M++   KP+  TYT+L+
Sbjct: 517 KFFHDLEGLGIRPNAITYNSIMLGLCKSRQTDRAIDFLAYMISKRCKPTEATYTILI 573



 Score =  147 bits (372), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 98/364 (26%), Positives = 169/364 (46%), Gaps = 3/364 (0%)

Query: 314 AEEALGNTNYSMDAYQANQVLKQLQDHTVALGFFNWLRRQAGFKH--DEHTYTTMVGILG 371
           A + L   N + D    N +L+ L D          L RQ   +   D  TYT ++    
Sbjct: 203 ALQVLDRMNVAPDVVTYNTILRTLCDSGKLKQAMEVLDRQLQKECYPDVITYTILIEATC 262

Query: 372 RARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRV 431
           +    G   KLLD+M   G +P+VVTYN LI+   +   L+EA+     M   GC+P+ +
Sbjct: 263 KESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCQPNVI 322

Query: 432 TYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEM 491
           T+  ++      G    A  +   M   G SP   T++++IN L + G L  A  +  +M
Sbjct: 323 THNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKM 382

Query: 492 VNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYL 551
              GC PN ++YN ++    K +    A++    M + G  PD VTY+ ++  L   G +
Sbjct: 383 PMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKV 442

Query: 552 DEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSL 611
           D A  +  ++  K   P    Y  ++D   K G   +A +  + M + GL+P++ T +SL
Sbjct: 443 DVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSL 502

Query: 612 LSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTY-TLLLSCCTEARSPYDMGFCHELMAVSG 670
           +S   R G++ +A      +  LG++P+  TY +++L  C   ++   + F   +++   
Sbjct: 503 VSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNSIMLGLCKSRQTDRAIDFLAYMISKRC 562

Query: 671 HPAH 674
            P  
Sbjct: 563 KPTE 566



 Score =  140 bits (352), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 86/295 (29%), Positives = 145/295 (49%), Gaps = 3/295 (1%)

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
           Q+G   D  TY  ++    ++   G I+  L  + R    P+VVTYN ++ +   +  L 
Sbjct: 177 QSGAVPDVITYNVLISGYCKS---GEIDNALQVLDRMNVAPDVVTYNTILRTLCDSGKLK 233

Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
           +A++V  +     C PD +TY  LI+   K   +  AM +  +M+  G  PD  TY+V+I
Sbjct: 234 QAMEVLDRQLQKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLI 293

Query: 473 NCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFE 532
           N + K G L  A +    M + GC PN++T+NI++        +  A KL  DM   G  
Sbjct: 294 NGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCS 353

Query: 533 PDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEW 592
           P  VT++I++  L   G L  A  +  +M      P+   Y  L+  + K   + +A E+
Sbjct: 354 PSVVTFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEY 413

Query: 593 YEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
            + M+  G  P++ T N+LL+A  + G++  A  +L  + + G  P L TY  ++
Sbjct: 414 LDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVI 468



 Score =  131 bits (329), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 76/256 (29%), Positives = 130/256 (50%)

Query: 381 KLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIH 440
           KLL  M+R GC P+VVT+N LI+   R   L  A+D+ ++M + GC P+ ++Y  L+   
Sbjct: 342 KLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGF 401

Query: 441 AKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNL 500
            K   +D A++    M + G  PD  TY+ ++  L K G +  A ++  ++ ++GC P L
Sbjct: 402 CKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVL 461

Query: 501 VTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAE 560
           +TYN +I   +K    + A+KL  +M+  G +PD +TYS ++  L   G +DEA   F +
Sbjct: 462 ITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHD 521

Query: 561 MRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQ 620
           +      P+   Y  ++    K+    +A ++   M+    +P   T   L+      G 
Sbjct: 522 LEGLGIRPNAITYNSIMLGLCKSRQTDRAIDFLAYMISKRCKPTEATYTILIEGIAYEGL 581

Query: 621 LSDAYHLLQGMLNLGL 636
             +A  LL  + + GL
Sbjct: 582 AKEALDLLNELCSRGL 597



 Score =  129 bits (325), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 69/240 (28%), Positives = 122/240 (50%)

Query: 362 TYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQM 421
           T+  ++  L R    G    +L++M   GC PN ++YN L+H + +   ++ A++    M
Sbjct: 358 TFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIM 417

Query: 422 QVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHL 481
              GC PD VTY TL+    K G +DVA+++  ++ + G SP   TY+ +I+ L K G  
Sbjct: 418 VSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKT 477

Query: 482 QAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIV 541
           + A +L  EM  +G  P+++TY+ +++  ++      A+K + D++  G  P+ +TY+ +
Sbjct: 478 ERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNSI 537

Query: 542 MEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGL 601
           M  L      D A    A M  K   P E  Y +L++     G  ++A +    +   GL
Sbjct: 538 MLGLCKSRQTDRAIDFLAYMISKRCKPTEATYTILIEGIAYEGLAKEALDLLNELCSRGL 597



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 97/368 (26%), Positives = 169/368 (45%), Gaps = 7/368 (1%)

Query: 381 KLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIH 440
           K L+ MV  G  P+++    LI  + R     +A  V + ++  G  PD +TY  LI  +
Sbjct: 135 KFLESMVYRGDIPDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGAVPDVITYNVLISGY 194

Query: 441 AKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNL 500
            K+G +D A+ +  +M  A   PD  TY+ I+  L  +G L+ A ++    + + C P++
Sbjct: 195 CKSGEIDNALQVLDRMNVA---PDVVTYNTILRTLCDSGKLKQAMEVLDRQLQKECYPDV 251

Query: 501 VTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAE 560
           +TY I+I    K      A+KL  +M+N G +PD VTY++++  +   G LDEA      
Sbjct: 252 ITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNN 311

Query: 561 MRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQ 620
           M      P+   + +++      G    A +    ML+ G  P+V T N L++   R G 
Sbjct: 312 MPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGL 371

Query: 621 LSDAYHLLQGMLNLGLKPSLQTYT-LLLSCCTEARSPYDMGFCHELMAVSGHPAHM-FLL 678
           L  A  +L+ M   G  P+  +Y  LL   C E +    + +   +++   +P  + +  
Sbjct: 372 LGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNT 431

Query: 679 SMPSPGPDGQNVRDHVGSFLEMMHSEDRESKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQ 738
            + +   DG+   D     L  + S+         + V+D L K G  E A  + +   +
Sbjct: 432 LLTALCKDGK--VDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRR 489

Query: 739 KNVYPDAV 746
           K + PD +
Sbjct: 490 KGLKPDII 497



 Score = 97.8 bits (242), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 69/243 (28%), Positives = 118/243 (48%), Gaps = 5/243 (2%)

Query: 407 RANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTF 466
           R   L +     + M   G  PD +   +LI    + G    A  + + ++ +G  PD  
Sbjct: 126 RNGELEDGFKFLESMVYRGDIPDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGAVPDVI 185

Query: 467 TYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALK-LYRD 525
           TY+V+I+   K+G +  A Q+   M      P++VTYN ++     +   + A++ L R 
Sbjct: 186 TYNVLISGYCKSGEIDNALQVLDRM---NVAPDVVTYNTILRTLCDSGKLKQAMEVLDRQ 242

Query: 526 MQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGN 585
           +Q   + PD +TY+I++E       + +A  +  EMR K   PD   Y +L++   K G 
Sbjct: 243 LQKECY-PDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGR 301

Query: 586 VRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTL 645
           + +A ++   M   G +PNV T N +L +    G+  DA  LL  ML  G  PS+ T+ +
Sbjct: 302 LDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNI 361

Query: 646 LLS 648
           L++
Sbjct: 362 LIN 364



 Score = 71.2 bits (173), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 73/306 (23%), Positives = 128/306 (41%), Gaps = 31/306 (10%)

Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPD 534
           L + G L+   +    MV +G IP+++    +I    +    + A  +   ++ +G  PD
Sbjct: 124 LVRNGELEDGFKFLESMVYRGDIPDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGAVPD 183

Query: 535 KVTYSIVMEVLGHC--GYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEW 592
            +TY++++   G+C  G +D A  V   M   N  PD   Y  ++     +G +++A E 
Sbjct: 184 VITYNVLIS--GYCKSGEIDNALQVLDRM---NVAPDVVTYNTILRTLCDSGKLKQAMEV 238

Query: 593 YEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS-CCT 651
            +  LQ    P+V T   L+ A  +   +  A  LL  M N G KP + TY +L++  C 
Sbjct: 239 LDRQLQKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICK 298

Query: 652 EARSPYDMGFCHELMAVSGHPA----HMFLLSMPSPGP--DGQNVRDHVGSFLEMMHSED 705
           E R    + F + + +    P     ++ L SM S G   D +         L  M  + 
Sbjct: 299 EGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAE-------KLLSDMLRKG 351

Query: 706 RESKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAV----------KEKGMSYWL 755
                   + +++FL + GL   A  + E        P+++          KEK M   +
Sbjct: 352 CSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAI 411

Query: 756 INLHVM 761
             L +M
Sbjct: 412 EYLDIM 417



 Score = 68.6 bits (166), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 37/136 (27%), Positives = 71/136 (52%)

Query: 362 TYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQM 421
           TY T++  L +  +     KLLD+M R G +P+++TY+ L+    R   ++EA+  F  +
Sbjct: 463 TYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDL 522

Query: 422 QVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHL 481
           + +G  P+ +TY +++    K+   D A+D    M +    P   TY+++I  +   G  
Sbjct: 523 EGLGIRPNAITYNSIMLGLCKSRQTDRAIDFLAYMISKRCKPTEATYTILIEGIAYEGLA 582

Query: 482 QAAHQLFCEMVNQGCI 497
           + A  L  E+ ++G +
Sbjct: 583 KEALDLLNELCSRGLV 598



 Score = 55.1 bits (131), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 33/119 (27%), Positives = 57/119 (47%), Gaps = 1/119 (0%)

Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLI 402
           A+   + +RR+ G K D  TY+++V  L R  +     K    +   G +PN +TYN ++
Sbjct: 480 AIKLLDEMRRK-GLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNSIM 538

Query: 403 HSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGL 461
               ++   + A+D    M    C+P   TY  LI+  A  G    A+D+  ++ + GL
Sbjct: 539 LGLCKSRQTDRAIDFLAYMISKRCKPTEATYTILIEGIAYEGLAKEALDLLNELCSRGL 597


>gi|115468576|ref|NP_001057887.1| Os06g0565000 [Oryza sativa Japonica Group]
 gi|113595927|dbj|BAF19801.1| Os06g0565000 [Oryza sativa Japonica Group]
 gi|125597608|gb|EAZ37388.1| hypothetical protein OsJ_21726 [Oryza sativa Japonica Group]
          Length = 687

 Score =  151 bits (381), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 92/331 (27%), Positives = 160/331 (48%), Gaps = 35/331 (10%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           ++ G   D  T+ +++   G+  +   + +L+++M R GC+ +VVTYN LI+ + +   +
Sbjct: 215 KEMGCLPDVVTFNSLIDGYGKCGELDEVEQLVEEMRRSGCKADVVTYNALINCFCKFGRM 274

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
             A   F  M+  G   + VT+ T +D   K G +  AM ++ +M+  G++ + FTY+ +
Sbjct: 275 ETAYGYFAAMKREGVMANVVTFSTFVDAFCKEGLVREAMKLFAQMRVRGMALNEFTYTCL 334

Query: 472 INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKAR----------------- 514
           I+   KAG L  A  L  EMV QG   N+VTY +++    K R                 
Sbjct: 335 IDGTCKAGRLDDAIVLLDEMVRQGVPLNVVTYTVLVDGLCKERKVAEAEDVLRMMEKAGV 394

Query: 515 ------------------NYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEA 556
                             N + AL L  +M+N G E D   Y  +++ L +   LDEA++
Sbjct: 395 RANELLYTTLIHGHFMNKNSEKALGLLSEMKNKGLELDISLYGALIQGLCNVHKLDEAKS 454

Query: 557 VFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFL 616
           +  +M      P+  +Y  ++D   K+G V +A    + +L +G +PNV T  +L+    
Sbjct: 455 LLTKMDESGLEPNYIIYTTMMDACFKSGKVPEAIAMLQKILDSGFQPNVITYCALIDGLC 514

Query: 617 RVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
           + G + +A      M +LGL P++Q YT L+
Sbjct: 515 KAGSIDEAISHFNKMRDLGLDPNVQAYTALV 545



 Score =  137 bits (345), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 93/321 (28%), Positives = 151/321 (47%), Gaps = 12/321 (3%)

Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLI 402
           A+  F  +R + G   +E TYT ++    +A +      LLD+MVR G   NVVTY  L+
Sbjct: 312 AMKLFAQMRVR-GMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPLNVVTYTVLV 370

Query: 403 HSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLS 462
               +   + EA DV + M+  G   + + Y TLI  H      + A+ +  +M+  GL 
Sbjct: 371 DGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEKALGLLSEMKNKGLE 430

Query: 463 PDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKL 522
            D   Y  +I  L     L  A  L  +M   G  PN + Y  M+    K+     A+ +
Sbjct: 431 LDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTMMDACFKSGKVPEAIAM 490

Query: 523 YRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGK 582
            + + ++GF+P+ +TY  +++ L   G +DEA + F +MR     P+   Y  LVD   K
Sbjct: 491 LQKILDSGFQPNVITYCALIDGLCKAGSIDEAISHFNKMRDLGLDPNVQAYTALVDGLCK 550

Query: 583 AGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQT 642
            G + +A + +  M+  G+  +     +LL  +L+ G L DA+ L   M++ GL+  L  
Sbjct: 551 NGCLNEAVQLFNEMVHKGMSLDKVVYTALLDGYLKQGNLHDAFALKAKMIDSGLQLDLFC 610

Query: 643 YTLLLSCCTEARSPYDMGFCH 663
           YT  +S           GFC+
Sbjct: 611 YTCFIS-----------GFCN 620



 Score =  127 bits (318), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 83/278 (29%), Positives = 137/278 (49%), Gaps = 4/278 (1%)

Query: 370 LGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPD 429
           L R R    + +L +Q+      PNV T+N +I    +   L EA  +F +M+ +GC PD
Sbjct: 167 LARDRSGRLVRRLFEQLP----APNVFTFNIVIDFLCKEGELAEARSLFSRMKEMGCLPD 222

Query: 430 RVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFC 489
            VT+ +LID + K G LD    + ++M+ +G   D  TY+ +INC  K G ++ A+  F 
Sbjct: 223 VVTFNSLIDGYGKCGELDEVEQLVEEMRRSGCKADVVTYNALINCFCKFGRMETAYGYFA 282

Query: 490 EMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCG 549
            M  +G + N+VT++  +    K    + A+KL+  M+  G   ++ TY+ +++     G
Sbjct: 283 AMKREGVMANVVTFSTFVDAFCKEGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAG 342

Query: 550 YLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCN 609
            LD+A  +  EM R+    +   Y +LVD   K   V +A +    M +AG+R N     
Sbjct: 343 RLDDAIVLLDEMVRQGVPLNVVTYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELLYT 402

Query: 610 SLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
           +L+           A  LL  M N GL+  +  Y  L+
Sbjct: 403 TLIHGHFMNKNSEKALGLLSEMKNKGLELDISLYGALI 440



 Score =  122 bits (306), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 76/267 (28%), Positives = 130/267 (48%), Gaps = 6/267 (2%)

Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLI 402
           ALG  + ++ + G + D   Y  ++  L    +      LL +M   G +PN + Y  ++
Sbjct: 417 ALGLLSEMKNK-GLELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTMM 475

Query: 403 HSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLS 462
            +  ++  + EA+ + +++   G +P+ +TYC LID   KAG +D A+  + KM+  GL 
Sbjct: 476 DACFKSGKVPEAIAMLQKILDSGFQPNVITYCALIDGLCKAGSIDEAISHFNKMRDLGLD 535

Query: 463 PDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKL 522
           P+   Y+ +++ L K G L  A QLF EMV++G   + V Y  ++    K  N   A  L
Sbjct: 536 PNVQAYTALVDGLCKNGCLNEAVQLFNEMVHKGMSLDKVVYTALLDGYLKQGNLHDAFAL 595

Query: 523 YRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGK 582
              M ++G + D   Y+  +    +   + EA  VF+EM      PD  VY  L+  + K
Sbjct: 596 KAKMIDSGLQLDLFCYTCFISGFCNLNMMPEAREVFSEMIGHGIAPDRAVYNCLISKYQK 655

Query: 583 AGNVRKAWEWYEAMLQAGLRPNVPTCN 609
            GN+ +A       LQ  +   +P+C 
Sbjct: 656 LGNLEEAIS-----LQDEMERVLPSCT 677



 Score =  116 bits (290), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 84/331 (25%), Positives = 144/331 (43%), Gaps = 35/331 (10%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           R++G K D  TY  ++    +  +          M R+G   NVVT++  + ++ +   +
Sbjct: 250 RRSGCKADVVTYNALINCFCKFGRMETAYGYFAAMKREGVMANVVTFSTFVDAFCKEGLV 309

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
            EA+ +F QM+V G   +  TY  LID   KAG LD A+ +  +M   G+  +  TY+V+
Sbjct: 310 REAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPLNVVTYTVL 369

Query: 472 INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQN--- 528
           ++ L K   +  A  +   M   G   N + Y  +I      +N + AL L  +M+N   
Sbjct: 370 VDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEKALGLLSEMKNKGL 429

Query: 529 --------------------------------AGFEPDKVTYSIVMEVLGHCGYLDEAEA 556
                                           +G EP+ + Y+ +M+     G + EA A
Sbjct: 430 ELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTMMDACFKSGKVPEAIA 489

Query: 557 VFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFL 616
           +  ++    + P+   Y  L+D   KAG++ +A   +  M   GL PNV    +L+    
Sbjct: 490 MLQKILDSGFQPNVITYCALIDGLCKAGSIDEAISHFNKMRDLGLDPNVQAYTALVDGLC 549

Query: 617 RVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
           + G L++A  L   M++ G+      YT LL
Sbjct: 550 KNGCLNEAVQLFNEMVHKGMSLDKVVYTALL 580


>gi|413955492|gb|AFW88141.1| hypothetical protein ZEAMMB73_138069 [Zea mays]
          Length = 1091

 Score =  151 bits (381), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 97/318 (30%), Positives = 160/318 (50%), Gaps = 4/318 (1%)

Query: 333  VLKQLQDHTVAL---GFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRD 389
            +++ L  H  AL     FN  +   G      +Y +++  L           L  +M R 
Sbjct: 737  LIRHLCKHKKALEAHQLFNKFK-GLGVSLKTGSYNSLIRGLVDENLIDIAEDLFTEMKRL 795

Query: 390  GCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVA 449
            GC P+  TYN ++ + G++  + E L V K+M   G E   VTY T+I    K+  L+ A
Sbjct: 796  GCGPDEFTYNLILDAMGKSMRVEEMLKVQKEMHRKGYESTYVTYNTIISGLVKSKRLEQA 855

Query: 450  MDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIAL 509
            +D+Y  + + G SP   TY  +++ L K+G +  A  LF EM+  GC PN   YNI++  
Sbjct: 856  IDLYYNLMSEGFSPTPCTYGPLLDGLLKSGKMVDAENLFNEMLEYGCEPNCTIYNILLNG 915

Query: 510  QAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPD 569
               A N ++  +L+  M   G  PD  +Y+I+++ L   G L++    F ++      PD
Sbjct: 916  HRIAGNTENVCQLFEKMVEQGINPDIKSYTILIDTLCTAGRLNDGLCYFRQLHELGLEPD 975

Query: 570  EPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQ 629
              VY LL+D  GK+  + +A   +  M + G+ PN+ T NSL+    + G+ ++A  + +
Sbjct: 976  LIVYNLLIDGLGKSERIEEAVSLFNEMKKKGIIPNLYTYNSLILHLGKAGKAAEAAQMYE 1035

Query: 630  GMLNLGLKPSLQTYTLLL 647
             +L  G KPS+ TY  L+
Sbjct: 1036 ELLRKGWKPSVFTYNALI 1053



 Score =  149 bits (376), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 84/304 (27%), Positives = 156/304 (51%)

Query: 349 WLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRA 408
           W  + +  K D  TY T++   G +    ++ ++ + MV DG   N+V+Y  ++ +  + 
Sbjct: 300 WKMKASDQKPDRVTYITLLDKCGDSGDSQSVVEVWNAMVADGYNDNIVSYTAVVDALCQV 359

Query: 409 NYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTY 468
             ++EAL VF +M+  G  P++ +Y +LI    KA   D A++++  M A G SP+ +T+
Sbjct: 360 GRVDEALAVFDEMKEKGMSPEQYSYNSLISGFLKADMFDRALELFNHMNACGPSPNGYTH 419

Query: 469 SVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQN 528
            + IN  GK+G    A Q +  M ++G +P++   N ++   A +     A +++ +++ 
Sbjct: 420 VLFINYYGKSGQSLKAIQRYEHMKSKGIVPDVAAANAVLYSLAGSGRLGMAKRVFYELKA 479

Query: 529 AGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRK 588
            G  PD +TY+++++        DEA   F++M     VPD      L+D   K G   +
Sbjct: 480 MGVSPDTITYTMMIKCCSKASKADEAMNFFSDMVESGCVPDVLALNSLIDTLYKGGKGNE 539

Query: 589 AWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
           AW+ +  + +  + P   T N+LLS   R G++ +   LL+ M      P+L TY  +L 
Sbjct: 540 AWQLFHKLKEMKIEPTNGTYNTLLSGLGREGKVKEVMQLLEEMTRTIYPPNLITYNTVLD 599

Query: 649 CCTE 652
           C ++
Sbjct: 600 CLSK 603



 Score =  145 bits (365), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 90/345 (26%), Positives = 168/345 (48%), Gaps = 4/345 (1%)

Query: 312 PLAEEALGNTNYSMDAYQANQVLKQLQDHTV---ALGFFNWLRRQAGFKHDEHTYTTMVG 368
           P+A   +     S++AY  N ++  L        A+  +  +  + G      TY+ ++ 
Sbjct: 156 PVALPVMREAGMSLNAYTYNGLIYFLVKSGFDAEAMEVYKAMV-EDGISPSVRTYSVLMV 214

Query: 369 ILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEP 428
             G+ R    +  LL++M   G +PNV +Y   I   G+A   +EA  +  +M+  GC+P
Sbjct: 215 AFGKKRDVDTVLWLLNEMEARGVKPNVYSYTICIRVLGQAARFDEAYHILGKMEDSGCKP 274

Query: 429 DRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLF 488
           D VT+  +I +   AG L  A  ++ KM+A+   PD  TY  +++  G +G  Q+  +++
Sbjct: 275 DVVTHTVIIQVLCDAGRLSDAKAVFWKMKASDQKPDRVTYITLLDKCGDSGDSQSVVEVW 334

Query: 489 CEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHC 548
             MV  G   N+V+Y  ++    +      AL ++ +M+  G  P++ +Y+ ++      
Sbjct: 335 NAMVADGYNDNIVSYTAVVDALCQVGRVDEALAVFDEMKEKGMSPEQYSYNSLISGFLKA 394

Query: 549 GYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTC 608
              D A  +F  M      P+   + L ++ +GK+G   KA + YE M   G+ P+V   
Sbjct: 395 DMFDRALELFNHMNACGPSPNGYTHVLFINYYGKSGQSLKAIQRYEHMKSKGIVPDVAAA 454

Query: 609 NSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEA 653
           N++L +    G+L  A  +   +  +G+ P   TYT+++ CC++A
Sbjct: 455 NAVLYSLAGSGRLGMAKRVFYELKAMGVSPDTITYTMMIKCCSKA 499



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 102/366 (27%), Positives = 182/366 (49%), Gaps = 15/366 (4%)

Query: 284  LAPFSRHFASTGNVVESVSRILRQWKWGPLAEEALGNTNYSMDAYQANQVLKQLQDHT-- 341
            L P  RH       +E+  ++  ++K        LG    S+     N +++ L D    
Sbjct: 734  LCPLIRHLCKHKKALEA-HQLFNKFK-------GLG---VSLKTGSYNSLIRGLVDENLI 782

Query: 342  -VALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNR 400
             +A   F  ++R  G   DE TY  ++  +G++ +   + K+  +M R G +   VTYN 
Sbjct: 783  DIAEDLFTEMKR-LGCGPDEFTYNLILDAMGKSMRVEEMLKVQKEMHRKGYESTYVTYNT 841

Query: 401  LIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAG 460
            +I    ++  L +A+D++  +   G  P   TY  L+D   K+G +  A +++ +M   G
Sbjct: 842  IISGLVKSKRLEQAIDLYYNLMSEGFSPTPCTYGPLLDGLLKSGKMVDAENLFNEMLEYG 901

Query: 461  LSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSAL 520
              P+   Y++++N    AG+ +   QLF +MV QG  P++ +Y I+I     A      L
Sbjct: 902  CEPNCTIYNILLNGHRIAGNTENVCQLFEKMVEQGINPDIKSYTILIDTLCTAGRLNDGL 961

Query: 521  KLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLW 580
              +R +   G EPD + Y+++++ LG    ++EA ++F EM++K  +P+   Y  L+   
Sbjct: 962  CYFRQLHELGLEPDLIVYNLLIDGLGKSERIEEAVSLFNEMKKKGIIPNLYTYNSLILHL 1021

Query: 581  GKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSL 640
            GKAG   +A + YE +L+ G +P+V T N+L+  +   G   +AY     M+  G +P+ 
Sbjct: 1022 GKAGKAAEAAQMYEELLRKGWKPSVFTYNALIRGYSVSGSTDNAYAAYGQMIVGGCQPNS 1081

Query: 641  QTYTLL 646
             TY  L
Sbjct: 1082 STYMQL 1087



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 89/317 (28%), Positives = 153/317 (48%)

Query: 332 QVLKQLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGC 391
            +L+   D   AL  F    RQ    H   +   M+ ++    + G + ++ D M +   
Sbjct: 73  HMLRSAPDPAEALELFTAAARQPTKVHTTESCNYMLELMRAHGRVGDMAQVFDLMQKQVV 132

Query: 392 QPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMD 451
           + NV T+  +    G    L  A      M+  G   +  TY  LI    K+GF   AM+
Sbjct: 133 KTNVGTFATIFGGVGVEGGLRSAPVALPVMREAGMSLNAYTYNGLIYFLVKSGFDAEAME 192

Query: 452 MYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQA 511
           +YK M   G+SP   TYSV++   GK   +     L  EM  +G  PN+ +Y I I +  
Sbjct: 193 VYKAMVEDGISPSVRTYSVLMVAFGKKRDVDTVLWLLNEMEARGVKPNVYSYTICIRVLG 252

Query: 512 KARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEP 571
           +A  +  A  +   M+++G +PD VT++++++VL   G L +A+AVF +M+  +  PD  
Sbjct: 253 QAARFDEAYHILGKMEDSGCKPDVVTHTVIIQVLCDAGRLSDAKAVFWKMKASDQKPDRV 312

Query: 572 VYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGM 631
            Y  L+D  G +G+ +   E + AM+  G   N+ +  +++ A  +VG++ +A  +   M
Sbjct: 313 TYITLLDKCGDSGDSQSVVEVWNAMVADGYNDNIVSYTAVVDALCQVGRVDEALAVFDEM 372

Query: 632 LNLGLKPSLQTYTLLLS 648
              G+ P   +Y  L+S
Sbjct: 373 KEKGMSPEQYSYNSLIS 389



 Score =  137 bits (344), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 91/338 (26%), Positives = 159/338 (47%), Gaps = 38/338 (11%)

Query: 349 WLRRQA---GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSY 405
           WL  +    G K + ++YT  + +LG+A +F     +L +M   GC+P+VVT+  +I   
Sbjct: 227 WLLNEMEARGVKPNVYSYTICIRVLGQAARFDEAYHILGKMEDSGCKPDVVTHTVIIQVL 286

Query: 406 GRANYLNEALDVFKQMQVVGCEPDRVTYCTL----------------------------- 436
             A  L++A  VF +M+    +PDRVTY TL                             
Sbjct: 287 CDAGRLSDAKAVFWKMKASDQKPDRVTYITLLDKCGDSGDSQSVVEVWNAMVADGYNDNI 346

Query: 437 ------IDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCE 490
                 +D   + G +D A+ ++ +M+  G+SP+ ++Y+ +I+   KA     A +LF  
Sbjct: 347 VSYTAVVDALCQVGRVDEALAVFDEMKEKGMSPEQYSYNSLISGFLKADMFDRALELFNH 406

Query: 491 MVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGY 550
           M   G  PN  T+ + I    K+     A++ Y  M++ G  PD    + V+  L   G 
Sbjct: 407 MNACGPSPNGYTHVLFINYYGKSGQSLKAIQRYEHMKSKGIVPDVAAANAVLYSLAGSGR 466

Query: 551 LDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNS 610
           L  A+ VF E++     PD   Y +++    KA    +A  ++  M+++G  P+V   NS
Sbjct: 467 LGMAKRVFYELKAMGVSPDTITYTMMIKCCSKASKADEAMNFFSDMVESGCVPDVLALNS 526

Query: 611 LLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
           L+    + G+ ++A+ L   +  + ++P+  TY  LLS
Sbjct: 527 LIDTLYKGGKGNEAWQLFHKLKEMKIEPTNGTYNTLLS 564



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 79/301 (26%), Positives = 145/301 (48%), Gaps = 1/301 (0%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           G+  +  +YT +V  L +  +      + D+M   G  P   +YN LI  + +A+  + A
Sbjct: 341 GYNDNIVSYTAVVDALCQVGRVDEALAVFDEMKEKGMSPEQYSYNSLISGFLKADMFDRA 400

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
           L++F  M   G  P+  T+   I+ + K+G    A+  Y+ M++ G+ PD    + ++  
Sbjct: 401 LELFNHMNACGPSPNGYTHVLFINYYGKSGQSLKAIQRYEHMKSKGIVPDVAAANAVLYS 460

Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPD 534
           L  +G L  A ++F E+   G  P+ +TY +MI   +KA     A+  + DM  +G  PD
Sbjct: 461 LAGSGRLGMAKRVFYELKAMGVSPDTITYTMMIKCCSKASKADEAMNFFSDMVESGCVPD 520

Query: 535 KVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYE 594
            +  + +++ L   G  +EA  +F +++     P    Y  L+   G+ G V++  +  E
Sbjct: 521 VLALNSLIDTLYKGGKGNEAWQLFHKLKEMKIEPTNGTYNTLLSGLGREGKVKEVMQLLE 580

Query: 595 AMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTY-TLLLSCCTEA 653
            M +    PN+ T N++L    + G+++ A  +L  M   G  P L +Y T++     E 
Sbjct: 581 EMTRTIYPPNLITYNTVLDCLSKNGEVNCAIDMLYSMTEKGCAPDLSSYNTVMYGLIKEE 640

Query: 654 R 654
           R
Sbjct: 641 R 641



 Score =  129 bits (325), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 78/305 (25%), Positives = 150/305 (49%), Gaps = 2/305 (0%)

Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLI 402
           AL  F+ ++ + G   ++++Y +++    +A  F    +L + M   G  PN  T+   I
Sbjct: 365 ALAVFDEMKEK-GMSPEQYSYNSLISGFLKADMFDRALELFNHMNACGPSPNGYTHVLFI 423

Query: 403 HSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLS 462
           + YG++    +A+  ++ M+  G  PD      ++   A +G L +A  ++ +++A G+S
Sbjct: 424 NYYGKSGQSLKAIQRYEHMKSKGIVPDVAAANAVLYSLAGSGRLGMAKRVFYELKAMGVS 483

Query: 463 PDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKL 522
           PDT TY+++I C  KA     A   F +MV  GC+P+++  N +I    K      A +L
Sbjct: 484 PDTITYTMMIKCCSKASKADEAMNFFSDMVESGCVPDVLALNSLIDTLYKGGKGNEAWQL 543

Query: 523 YRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGK 582
           +  ++    EP   TY+ ++  LG  G + E   +  EM R  + P+   Y  ++D   K
Sbjct: 544 FHKLKEMKIEPTNGTYNTLLSGLGREGKVKEVMQLLEEMTRTIYPPNLITYNTVLDCLSK 603

Query: 583 AGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQT 642
            G V  A +   +M + G  P++ + N+++   ++  +L +A+ +   M  + L P   T
Sbjct: 604 NGEVNCAIDMLYSMTEKGCAPDLSSYNTVMYGLIKEERLEEAFRMFCQMKKI-LAPDYAT 662

Query: 643 YTLLL 647
              +L
Sbjct: 663 LCTIL 667



 Score =  105 bits (261), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 99/420 (23%), Positives = 176/420 (41%), Gaps = 39/420 (9%)

Query: 362  TYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQM 421
            TY T++  L +  +      +L  M   GC P++ +YN +++   +   L EA  +F QM
Sbjct: 593  TYNTVLDCLSKNGEVNCAIDMLYSMTEKGCAPDLSSYNTVMYGLIKEERLEEAFRMFCQM 652

Query: 422  QVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKK-MQAAGLSPDTFTY-SVIINCLGKAG 479
            + +   PD  T CT++    K G +  A+   K+ +  AG + D  ++ S++   L KAG
Sbjct: 653  KKI-LAPDYATLCTILPSFVKNGLMKEALHTVKEYILKAGCNVDKSSFHSLMEGILKKAG 711

Query: 480  --------------------------------HLQA--AHQLFCEMVNQGCIPNLVTYNI 505
                                            H +A  AHQLF +    G      +YN 
Sbjct: 712  VEKSIEFAENIASRGILLNDFFLCPLIRHLCKHKKALEAHQLFNKFKGLGVSLKTGSYNS 771

Query: 506  MIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKN 565
            +I           A  L+ +M+  G  PD+ TY+++++ +G    ++E   V  EM RK 
Sbjct: 772  LIRGLVDENLIDIAEDLFTEMKRLGCGPDEFTYNLILDAMGKSMRVEEMLKVQKEMHRKG 831

Query: 566  WVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAY 625
            +      Y  ++    K+  + +A + Y  ++  G  P   T   LL   L+ G++ DA 
Sbjct: 832  YESTYVTYNTIISGLVKSKRLEQAIDLYYNLMSEGFSPTPCTYGPLLDGLLKSGKMVDAE 891

Query: 626  HLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGFCHELMAVSG-HPAHMFLLSMPSPG 684
            +L   ML  G +P+   Y +LL+    A +  ++    E M   G +P       +    
Sbjct: 892  NLFNEMLEYGCEPNCTIYNILLNGHRIAGNTENVCQLFEKMVEQGINPDIKSYTILIDTL 951

Query: 685  PDGQNVRDHVGSFLEMMHSEDRESKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPD 744
                 + D +  +   +H    E    + + ++D L KS   EEA S++    +K + P+
Sbjct: 952  CTAGRLNDGL-CYFRQLHELGLEPDLIVYNLLIDGLGKSERIEEAVSLFNEMKKKGIIPN 1010



 Score = 73.9 bits (180), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 65/263 (24%), Positives = 109/263 (41%), Gaps = 7/263 (2%)

Query: 395 VVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCT----LIDIHAKAGFLDVAM 450
           VV  + ++H    A    EAL++F        +      C     L+  H + G +    
Sbjct: 65  VVGTDSVVHMLRSAPDPAEALELFTAAARQPTKVHTTESCNYMLELMRAHGRVGDMAQVF 124

Query: 451 DMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQ 510
           D+   MQ   +  +  T++ I   +G  G L++A      M   G   N  TYN +I   
Sbjct: 125 DL---MQKQVVKTNVGTFATIFGGVGVEGGLRSAPVALPVMREAGMSLNAYTYNGLIYFL 181

Query: 511 AKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDE 570
            K+     A+++Y+ M   G  P   TYS++M   G    +D    +  EM  +   P+ 
Sbjct: 182 VKSGFDAEAMEVYKAMVEDGISPSVRTYSVLMVAFGKKRDVDTVLWLLNEMEARGVKPNV 241

Query: 571 PVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQG 630
             Y + + + G+A    +A+     M  +G +P+V T   ++      G+LSDA  +   
Sbjct: 242 YSYTICIRVLGQAARFDEAYHILGKMEDSGCKPDVVTHTVIIQVLCDAGRLSDAKAVFWK 301

Query: 631 MLNLGLKPSLQTYTLLLSCCTEA 653
           M     KP   TY  LL  C ++
Sbjct: 302 MKASDQKPDRVTYITLLDKCGDS 324



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 39/133 (29%), Positives = 65/133 (48%), Gaps = 1/133 (0%)

Query: 343  ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLI 402
             L +F  L  + G + D   Y  ++  LG++ +      L ++M + G  PN+ TYN LI
Sbjct: 960  GLCYFRQLH-ELGLEPDLIVYNLLIDGLGKSERIEEAVSLFNEMKKKGIIPNLYTYNSLI 1018

Query: 403  HSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLS 462
               G+A    EA  +++++   G +P   TY  LI  ++ +G  D A   Y +M   G  
Sbjct: 1019 LHLGKAGKAAEAAQMYEELLRKGWKPSVFTYNALIRGYSVSGSTDNAYAAYGQMIVGGCQ 1078

Query: 463  PDTFTYSVIINCL 475
            P++ TY  + N L
Sbjct: 1079 PNSSTYMQLPNQL 1091


>gi|356575482|ref|XP_003555869.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g35130-like [Glycine max]
          Length = 576

 Score =  151 bits (381), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 94/297 (31%), Positives = 147/297 (49%), Gaps = 2/297 (0%)

Query: 349 WLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRA 408
           W+  ++ FK D   Y  ++   G+   +        Q++   C P   TY  LI +Y  +
Sbjct: 144 WILLRSSFKPDVICYNLLIEAFGQKLLYKEAESTYLQLLEARCIPTEDTYALLIKAYCIS 203

Query: 409 NYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTY 468
             L +A  VF +M+  G     V Y   I+   K G  D A +++K+M+     P T TY
Sbjct: 204 GLLEKAEAVFAEMRNYGLPSSAVVYNAYINGLMKGGNSDKAEEIFKRMKKDACKPTTETY 263

Query: 469 SVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQN 528
           +++IN  GKAG    A +LF EM++  C PN+ TY  ++   A+    + A +++  MQ 
Sbjct: 264 TMLINLYGKAGKSFMALKLFHEMMSHDCKPNICTYTALVNAFAREGLCEKAEEVFEQMQE 323

Query: 529 AGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRK 588
           AG EPD   Y+ +ME     GY   A  +F+ M+     PD   Y +LVD +GKAG    
Sbjct: 324 AGLEPDVYAYNALMEAYSRAGYPYGAAEIFSLMQHMGCEPDRASYNILVDAYGKAGFQDD 383

Query: 589 AWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTL 645
           A   ++ M + G+ P + +   LLSA+ ++G ++    +L  M   GLK  L TY L
Sbjct: 384 AEAVFKDMKRVGITPTMKSHMVLLSAYSKMGSVNKCEEILNQMCKSGLK--LDTYVL 438



 Score =  147 bits (370), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 80/307 (26%), Positives = 161/307 (52%), Gaps = 3/307 (0%)

Query: 346 FFNWLRRQAGFKHDEHTYTTMVGILGRA-RQFGAINKLLDQMVRDGCQPNVVTYNRLIHS 404
            F  +++ A  K    TYT ++ + G+A + F A+ KL  +M+   C+PN+ TY  L+++
Sbjct: 247 IFKRMKKDAC-KPTTETYTMLINLYGKAGKSFMAL-KLFHEMMSHDCKPNICTYTALVNA 304

Query: 405 YGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPD 464
           + R     +A +VF+QMQ  G EPD   Y  L++ +++AG+   A +++  MQ  G  PD
Sbjct: 305 FAREGLCEKAEEVFEQMQEAGLEPDVYAYNALMEAYSRAGYPYGAAEIFSLMQHMGCEPD 364

Query: 465 TFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYR 524
             +Y+++++  GKAG    A  +F +M   G  P + ++ ++++  +K  +     ++  
Sbjct: 365 RASYNILVDAYGKAGFQDDAEAVFKDMKRVGITPTMKSHMVLLSAYSKMGSVNKCEEILN 424

Query: 525 DMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAG 584
            M  +G + D    + ++ + G  G   + E V   M + ++V D   Y +L++ +G+AG
Sbjct: 425 QMCKSGLKLDTYVLNSMLNLYGRLGQFGKMEEVLRVMEKGSYVADISTYNILINRYGQAG 484

Query: 585 NVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYT 644
            + +  + ++ +   GL+P+V T  S + A+ +         + + M++ G  P   T  
Sbjct: 485 FIERMEDLFQLLPSKGLKPDVVTWTSRIGAYSKKKLYLKCLEIFEEMIDDGCYPDGGTAK 544

Query: 645 LLLSCCT 651
           +LL+ C+
Sbjct: 545 VLLAACS 551



 Score =  139 bits (349), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 76/293 (25%), Positives = 143/293 (48%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           R  G       Y   +  L +        ++  +M +D C+P   TY  LI+ YG+A   
Sbjct: 217 RNYGLPSSAVVYNAYINGLMKGGNSDKAEEIFKRMKKDACKPTTETYTMLINLYGKAGKS 276

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
             AL +F +M    C+P+  TY  L++  A+ G  + A +++++MQ AGL PD + Y+ +
Sbjct: 277 FMALKLFHEMMSHDCKPNICTYTALVNAFAREGLCEKAEEVFEQMQEAGLEPDVYAYNAL 336

Query: 472 INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF 531
           +    +AG+   A ++F  M + GC P+  +YNI++    KA     A  +++DM+  G 
Sbjct: 337 MEAYSRAGYPYGAAEIFSLMQHMGCEPDRASYNILVDAYGKAGFQDDAEAVFKDMKRVGI 396

Query: 532 EPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWE 591
            P   ++ +++      G +++ E +  +M +     D  V   +++L+G+ G   K  E
Sbjct: 397 TPTMKSHMVLLSAYSKMGSVNKCEEILNQMCKSGLKLDTYVLNSMLNLYGRLGQFGKMEE 456

Query: 592 WYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYT 644
               M +     ++ T N L++ + + G +     L Q + + GLKP + T+T
Sbjct: 457 VLRVMEKGSYVADISTYNILINRYGQAGFIERMEDLFQLLPSKGLKPDVVTWT 509



 Score = 90.5 bits (223), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 64/269 (23%), Positives = 120/269 (44%), Gaps = 52/269 (19%)

Query: 329 QANQVLKQLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVR 388
           +A +V +Q+Q              +AG + D + Y  ++    RA       ++   M  
Sbjct: 313 KAEEVFEQMQ--------------EAGLEPDVYAYNALMEAYSRAGYPYGAAEIFSLMQH 358

Query: 389 DGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDV 448
            GC+P+  +YN L+ +YG+A + ++A  VFK M+ VG  P   ++  L+  ++K G ++ 
Sbjct: 359 MGCEPDRASYNILVDAYGKAGFQDDAEAVFKDMKRVGITPTMKSHMVLLSAYSKMGSVNK 418

Query: 449 AMDMYKKMQAAGLSPDTF-----------------------------------TYSVIIN 473
             ++  +M  +GL  DT+                                   TY+++IN
Sbjct: 419 CEEILNQMCKSGLKLDTYVLNSMLNLYGRLGQFGKMEEVLRVMEKGSYVADISTYNILIN 478

Query: 474 CLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEP 533
             G+AG ++    LF  + ++G  P++VT+   I   +K + Y   L+++ +M + G  P
Sbjct: 479 RYGQAGFIERMEDLFQLLPSKGLKPDVVTWTSRIGAYSKKKLYLKCLEIFEEMIDDGCYP 538

Query: 534 DKVTYSIVMEVLGHCGYLDEAEAVFAEMR 562
           D  T  +   +L  C   D+ E V   +R
Sbjct: 539 DGGTAKV---LLAACSNEDQTEQVTTVIR 564


>gi|147767652|emb|CAN77908.1| hypothetical protein VITISV_033177 [Vitis vinifera]
          Length = 1563

 Score =  151 bits (381), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 94/375 (25%), Positives = 165/375 (44%), Gaps = 73/375 (19%)

Query: 344  LGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIH 403
            L FFNW      F H    Y  M+ + G+ RQF    +L+D M     +  V T+  L+ 
Sbjct: 1162 LAFFNWATNLEEFGHSPEPYMEMIDLAGKVRQFDLAWQLIDLMKTRNVEIPVETFTILVR 1221

Query: 404  SYGRANYLNEALDVFKQMQVVGCEPDR--------------------------------- 430
             Y +A    EA+  F +M+  GC+PD+                                 
Sbjct: 1222 RYVKAGLAAEAVHAFNRMEDYGCKPDKIAFSVVISSLSKKRRAIEAQSFFDSLKDRFEPD 1281

Query: 431  -VTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFC 489
             V Y +L+    +AG +  A  ++ +M+ AG+ P+ +TYS++I+ L ++G +  AH +F 
Sbjct: 1282 VVVYTSLVHGWCRAGNISEAERVFGEMKMAGIXPNVYTYSIVIDALCRSGQITRAHDVFS 1341

Query: 490  EMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHC- 548
            EM++ GC PN +T+N ++ +  KA   +  L++Y  M+  G  PD +TY+ ++E   HC 
Sbjct: 1342 EMIDVGCDPNAITFNNLMRVHVKAGRTEKVLQVYNQMKRLGCPPDAITYNFLIE--SHCR 1399

Query: 549  -----------------------------------GYLDEAEAVFAEMRRKNWVPDEPVY 573
                                               G ++ A  +FA+M+     P+   Y
Sbjct: 1400 DDNLEEAVKILNSVKKGCNLNASSFNPIFGCISKLGDVNSAHRMFAKMKDLKCRPNTVTY 1459

Query: 574  GLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLN 633
             +L+ ++    +     +  + M +  + PN  T   L+S F  +G  ++AY   + M+ 
Sbjct: 1460 NILMRMFADKKSTDMVLKLRKEMDENEIEPNANTYRVLISTFCGIGHWNNAYSFFKEMIE 1519

Query: 634  LG-LKPSLQTYTLLL 647
               L+PSL  Y ++L
Sbjct: 1520 EKCLRPSLPVYEMVL 1534



 Score =  139 bits (350), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 99/353 (28%), Positives = 164/353 (46%), Gaps = 50/353 (14%)

Query: 298  VESVSRILRQWKWGPLAEEALGNTNYSMDAYQANQ-------VLKQLQDHTVAL---GFF 347
            VE+ + ++R++    LA EA+   N  M+ Y           V+  L     A+    FF
Sbjct: 1213 VETFTILVRRYVKAGLAAEAVHAFN-RMEDYGCKPDKIAFSVVISSLSKKRRAIEAQSFF 1271

Query: 348  NWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGR 407
            + L+ +  F+ D   YT++V    RA       ++  +M   G  PNV TY+ +I +  R
Sbjct: 1272 DSLKDR--FEPDVVVYTSLVHGWCRAGNISEAERVFGEMKMAGIXPNVYTYSIVIDALCR 1329

Query: 408  ANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFT 467
            +  +  A DVF +M  VGC+P+ +T+  L+ +H KAG  +  + +Y +M+  G  PD  T
Sbjct: 1330 SGQITRAHDVFSEMIDVGCDPNAITFNNLMRVHVKAGRTEKVLQVYNQMKRLGCPPDAIT 1389

Query: 468  YSVIIN----------------------------------CLGKAGHLQAAHQLFCEMVN 493
            Y+ +I                                   C+ K G + +AH++F +M +
Sbjct: 1390 YNFLIESHCRDDNLEEAVKILNSVKKGCNLNASSFNPIFGCISKLGDVNSAHRMFAKMKD 1449

Query: 494  QGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDE 553
              C PN VTYNI++ + A  ++    LKL ++M     EP+  TY +++      G+ + 
Sbjct: 1450 LKCRPNTVTYNILMRMFADKKSTDMVLKLRKEMDENEIEPNANTYRVLISTFCGIGHWNN 1509

Query: 554  AEAVFAEM-RRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGL--RP 603
            A + F EM   K   P  PVY +++    KAG ++K  E  E M+  G   RP
Sbjct: 1510 AYSFFKEMIEEKCLRPSLPVYEMVLQQLRKAGQLKKHEELVEKMVNRGFVTRP 1562


>gi|255660810|gb|ACU25574.1| pentatricopeptide repeat-containing protein [Glandularia dissecta]
          Length = 418

 Score =  151 bits (381), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 88/299 (29%), Positives = 160/299 (53%)

Query: 350 LRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRAN 409
           L ++  F+    T   ++  L + + F  +    ++ +  G   ++  +N L+HS+ +  
Sbjct: 91  LTKEHKFRVPFDTCRKVIEHLMKLKYFKLVWGFYEESLECGYPASLYFFNILMHSFVKEG 150

Query: 410 YLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYS 469
            +  A  VF  +   G  P  V++ TL++ + K G LD    +   MQA+G+ PD +TYS
Sbjct: 151 EIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQASGVQPDVYTYS 210

Query: 470 VIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNA 529
           V+IN L K   +  A++LF EM++ G +PN VT+  +I    K      A+++Y  M + 
Sbjct: 211 VLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYXQMLSQ 270

Query: 530 GFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKA 589
              PD +TY+ ++  L   G L +A+ +  EM  K   PD+  Y  L+D   K G++  A
Sbjct: 271 SLSPDLITYNTLIYGLCKKGDLKQAQDLXDEMSMKGLKPDKITYTTLIDGSCKEGDLETA 330

Query: 590 WEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
           +E+ + M++  +R +     +L+S   + G+  DA  +L+ ML++GLKP + TYT++++
Sbjct: 331 FEYRKRMIKENIRLDXVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIIN 389



 Score =  117 bits (293), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 71/227 (31%), Positives = 120/227 (52%)

Query: 381 KLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIH 440
           +L + M   G QP+V TY+ LI+   + + +++A ++F +M   G  P+ VT+ TLID H
Sbjct: 192 RLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGH 251

Query: 441 AKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNL 500
            K G +D+AM++Y +M +  LSPD  TY+ +I  L K G L+ A  L  EM  +G  P+ 
Sbjct: 252 CKNGRVDLAMEIYXQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLXDEMSMKGLKPDK 311

Query: 501 VTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAE 560
           +TY  +I    K  + ++A +  + M       D V Y+ ++  L   G   +AE +  E
Sbjct: 312 ITYTTLIDGSCKEGDLETAFEYRKRMIKENIRLDXVAYTALISGLCQEGRSVDAEKMLRE 371

Query: 561 MRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPT 607
           M      P+   Y ++++ + K G+V    +  + M + G  P+V T
Sbjct: 372 MLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYVPSVVT 418



 Score =  108 bits (269), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 80/303 (26%), Positives = 141/303 (46%), Gaps = 16/303 (5%)

Query: 271 FSKPSREMKIPAGLAPFS---RHFASTGNV--VESVSRILRQWKWGPLAEEALGNTNYSM 325
           F + S E   PA L  F+     F   G +   +SV   + +W   P    ++ + N  M
Sbjct: 123 FYEESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRP----SVVSFNTLM 178

Query: 326 DAYQANQVLKQLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQ 385
           + Y       +L D        N ++  +G + D +TY+ ++  L +  +    N+L D+
Sbjct: 179 NGYI------KLGDLDEGFRLKNAMQ-ASGVQPDVYTYSVLINGLCKESKMDDANELFDE 231

Query: 386 MVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGF 445
           M+ +G  PN VT+  LI  + +   ++ A++++ QM      PD +TY TLI    K G 
Sbjct: 232 MLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYXQMLSQSLSPDLITYNTLIYGLCKKGD 291

Query: 446 LDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNI 505
           L  A D+  +M   GL PD  TY+ +I+   K G L+ A +    M+ +    + V Y  
Sbjct: 292 LKQAQDLXDEMSMKGLKPDKITYTTLIDGSCKEGDLETAFEYRKRMIKENIRLDXVAYTA 351

Query: 506 MIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKN 565
           +I+   +      A K+ R+M + G +P+  TY++++      G +     +  EM+R  
Sbjct: 352 LISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDG 411

Query: 566 WVP 568
           +VP
Sbjct: 412 YVP 414


>gi|356562834|ref|XP_003549673.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g74580-like [Glycine max]
          Length = 747

 Score =  151 bits (381), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 85/306 (27%), Positives = 156/306 (50%), Gaps = 2/306 (0%)

Query: 363 YTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQ 422
           Y T++  L +        +L+++M  +GC PN+ TYN +I+   +   +++A  +     
Sbjct: 368 YNTLIKGLSQQGLILPALQLMNEMAENGCLPNIWTYNLVINGLCKMGCVSDASHLVDDAI 427

Query: 423 VVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQ 482
             GC PD  TY TLID + K   LD A +M  +M + G++PD  TY+ ++N L KAG  +
Sbjct: 428 AKGCPPDIFTYNTLIDGYCKQLKLDSATEMVNRMWSQGMTPDVITYNTLLNGLCKAGKSE 487

Query: 483 AAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVM 542
              ++F  M  +GC PN++TYNI++    KA+    A+ L  +M++ G +PD V++  + 
Sbjct: 488 EVMEIFKAMEEKGCTPNIITYNIIVDSLCKAKKVNEAVDLLGEMKSKGLKPDVVSFGTLF 547

Query: 543 EVLGHCGYLDEAEAVFAEMRRK-NWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGL 601
                 G +D A  +F  M ++ +       Y ++V  + +  N+  A + +  M  +G 
Sbjct: 548 TGFCKIGDIDGAYQLFRRMEKQYDVCHTTATYNIIVSAFSEQLNMNMAMKLFSVMKNSGC 607

Query: 602 RPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSC-CTEARSPYDMG 660
            P+  T   ++  F ++G ++  Y  L   +     PSL T+  +L+C C + +    +G
Sbjct: 608 DPDNYTYRVVIDGFCKMGNITQGYKFLLENMEKRFIPSLTTFGRVLNCLCVKDKVHEAVG 667

Query: 661 FCHELM 666
             H ++
Sbjct: 668 IIHLML 673



 Score =  137 bits (344), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 83/285 (29%), Positives = 141/285 (49%), Gaps = 2/285 (0%)

Query: 349 WLRR--QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYG 406
           +LR+    GF+ D+ TY +++    +       N++L   V  G +P+  TY  LI+ + 
Sbjct: 282 YLRKMVNGGFEPDDLTYNSIIDGYCKKGMVQDANRVLKDAVFKGFKPDEFTYCSLINGFC 341

Query: 407 RANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTF 466
           +    + A+ VFK     G  P  V Y TLI   ++ G +  A+ +  +M   G  P+ +
Sbjct: 342 KDGDPDRAMAVFKDGLGKGLRPSIVLYNTLIKGLSQQGLILPALQLMNEMAENGCLPNIW 401

Query: 467 TYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDM 526
           TY+++IN L K G +  A  L  + + +GC P++ TYN +I    K     SA ++   M
Sbjct: 402 TYNLVINGLCKMGCVSDASHLVDDAIAKGCPPDIFTYNTLIDGYCKQLKLDSATEMVNRM 461

Query: 527 QNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNV 586
            + G  PD +TY+ ++  L   G  +E   +F  M  K   P+   Y ++VD   KA  V
Sbjct: 462 WSQGMTPDVITYNTLLNGLCKAGKSEEVMEIFKAMEEKGCTPNIITYNIIVDSLCKAKKV 521

Query: 587 RKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGM 631
            +A +    M   GL+P+V +  +L + F ++G +  AY L + M
Sbjct: 522 NEAVDLLGEMKSKGLKPDVVSFGTLFTGFCKIGDIDGAYQLFRRM 566



 Score =  134 bits (336), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 101/397 (25%), Positives = 185/397 (46%), Gaps = 13/397 (3%)

Query: 361 HTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQ 420
           H++  ++ IL         +K+  +M   G Q +V TY   I S+ +      AL + + 
Sbjct: 112 HSHNAIMNILVEFGYHNQAHKVYMRMRDRGVQSDVYTYTIRIKSFCKTARPYAALRLLRN 171

Query: 421 MQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGH 480
           M  +GC+ + V YCT++     +G  D A +++ +M A  L PD   ++ +++ L K G 
Sbjct: 172 MPELGCDSNAVAYCTVVAGLYDSGEHDHARELFDEMLARCLCPDVVAFNKLVHVLCKKGL 231

Query: 481 LQAAHQLFCEMVNQGCIPNLVTYNIMI-------ALQAKARNYQ--SALKLYRDMQNAGF 531
           +  + +L  +++ +G  PNL T+NI +       AL    RN +   A +  R M N GF
Sbjct: 232 VFESERLLGKVLKRGVCPNLFTFNIFVQGLCREGALDRAVRNSRVVEAEEYLRKMVNGGF 291

Query: 532 EPDKVTYSIVMEVLGHC--GYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKA 589
           EPD +TY+ +++  G+C  G + +A  V  +   K + PDE  Y  L++ + K G+  +A
Sbjct: 292 EPDDLTYNSIID--GYCKKGMVQDANRVLKDAVFKGFKPDEFTYCSLINGFCKDGDPDRA 349

Query: 590 WEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSC 649
              ++  L  GLRP++   N+L+    + G +  A  L+  M   G  P++ TY L+++ 
Sbjct: 350 MAVFKDGLGKGLRPSIVLYNTLIKGLSQQGLILPALQLMNEMAENGCLPNIWTYNLVING 409

Query: 650 CTEARSPYDMGFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRESK 709
             +     D     +     G P  +F  +    G   Q   D     +  M S+     
Sbjct: 410 LCKMGCVSDASHLVDDAIAKGCPPDIFTYNTLIDGYCKQLKLDSATEMVNRMWSQGMTPD 469

Query: 710 RGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAV 746
               + +++ L K+G  EE   +++   +K   P+ +
Sbjct: 470 VITYNTLLNGLCKAGKSEEVMEIFKAMEEKGCTPNII 506



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 72/261 (27%), Positives = 133/261 (50%), Gaps = 3/261 (1%)

Query: 359 DEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVF 418
           D  TY T++    +  +  +  +++++M   G  P+V+TYN L++   +A    E +++F
Sbjct: 434 DIFTYNTLIDGYCKQLKLDSATEMVNRMWSQGMTPDVITYNTLLNGLCKAGKSEEVMEIF 493

Query: 419 KQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKA 478
           K M+  GC P+ +TY  ++D   KA  ++ A+D+  +M++ GL PD  ++  +     K 
Sbjct: 494 KAMEEKGCTPNIITYNIIVDSLCKAKKVNEAVDLLGEMKSKGLKPDVVSFGTLFTGFCKI 553

Query: 479 GHLQAAHQLFCEMVNQ-GCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVT 537
           G +  A+QLF  M  Q        TYNI+++  ++  N   A+KL+  M+N+G +PD  T
Sbjct: 554 GDIDGAYQLFRRMEKQYDVCHTTATYNIIVSAFSEQLNMNMAMKLFSVMKNSGCDPDNYT 613

Query: 538 YSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAML 597
           Y +V++     G + +      E   K ++P    +G +++       V +A      ML
Sbjct: 614 YRVVIDGFCKMGNITQGYKFLLENMEKRFIPSLTTFGRVLNCLCVKDKVHEAVGIIHLML 673

Query: 598 QAGLRPNVPTCNSLLSAFLRV 618
           Q G+ P   T N++  A  +V
Sbjct: 674 QKGIVPE--TVNTIFEADKKV 692



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 90/343 (26%), Positives = 160/343 (46%), Gaps = 23/343 (6%)

Query: 333 VLKQLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQ 392
           V+K   D   AL  FN  + + GFKH   TY  +V  LG   +F  + KLL +M R+   
Sbjct: 13  VVKIQTDPLKALEMFNSAKSEDGFKHTASTYKCIVQKLGHHGEFEEMEKLLSEM-RENVN 71

Query: 393 PNVV--TYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAM 450
             ++   Y   + +YGR   + EA+D F++M    C+P   ++  +++I  + G+ + A 
Sbjct: 72  NALLEGAYIEAMKNYGRKGKVQEAVDTFERMDFYNCDPSVHSHNAIMNILVEFGYHNQAH 131

Query: 451 DMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQ 510
            +Y +M+  G+  D +TY++ I    K     AA +L   M   GC  N V Y  ++A  
Sbjct: 132 KVYMRMRDRGVQSDVYTYTIRIKSFCKTARPYAALRLLRNMPELGCDSNAVAYCTVVAGL 191

Query: 511 AKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDE 570
             +  +  A +L+ +M      PD V ++ ++ VL   G + E+E +  ++ ++   P+ 
Sbjct: 192 YDSGEHDHARELFDEMLARCLCPDVVAFNKLVHVLCKKGLVFESERLLGKVLKRGVCPNL 251

Query: 571 PVYGLLVDLWGKAG---------NVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQL 621
             + + V    + G          V +A E+   M+  G  P+  T NS++  + + G +
Sbjct: 252 FTFNIFVQGLCREGALDRAVRNSRVVEAEEYLRKMVNGGFEPDDLTYNSIIDGYCKKGMV 311

Query: 622 SDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGFCHE 664
            DA  +L+  +  G KP   TY  L++           GFC +
Sbjct: 312 QDANRVLKDAVFKGFKPDEFTYCSLIN-----------GFCKD 343



 Score =  117 bits (294), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 81/305 (26%), Positives = 142/305 (46%), Gaps = 9/305 (2%)

Query: 359 DEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN------ 412
           D   +  +V +L +        +LL ++++ G  PN+ T+N  +    R   L+      
Sbjct: 215 DVVAFNKLVHVLCKKGLVFESERLLGKVLKRGVCPNLFTFNIFVQGLCREGALDRAVRNS 274

Query: 413 ---EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYS 469
              EA +  ++M   G EPD +TY ++ID + K G +  A  + K     G  PD FTY 
Sbjct: 275 RVVEAEEYLRKMVNGGFEPDDLTYNSIIDGYCKKGMVQDANRVLKDAVFKGFKPDEFTYC 334

Query: 470 VIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNA 529
            +IN   K G    A  +F + + +G  P++V YN +I   ++      AL+L  +M   
Sbjct: 335 SLINGFCKDGDPDRAMAVFKDGLGKGLRPSIVLYNTLIKGLSQQGLILPALQLMNEMAEN 394

Query: 530 GFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKA 589
           G  P+  TY++V+  L   G + +A  +  +   K   PD   Y  L+D + K   +  A
Sbjct: 395 GCLPNIWTYNLVINGLCKMGCVSDASHLVDDAIAKGCPPDIFTYNTLIDGYCKQLKLDSA 454

Query: 590 WEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSC 649
            E    M   G+ P+V T N+LL+   + G+  +   + + M   G  P++ TY +++  
Sbjct: 455 TEMVNRMWSQGMTPDVITYNTLLNGLCKAGKSEEVMEIFKAMEEKGCTPNIITYNIIVDS 514

Query: 650 CTEAR 654
             +A+
Sbjct: 515 LCKAK 519



 Score =  114 bits (286), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 100/390 (25%), Positives = 174/390 (44%), Gaps = 36/390 (9%)

Query: 295 GNVVESVSRILRQWKWGPLAEEALGNTNYSMDAYQANQVLKQ---LQDHTVALGFFN--- 348
           G  +E++    R+ K     +EA+ +T   MD Y  +  +     + +  V  G+ N   
Sbjct: 77  GAYIEAMKNYGRKGK----VQEAV-DTFERMDFYNCDPSVHSHNAIMNILVEFGYHNQAH 131

Query: 349 --WLR-RQAGFKHDEHTYTTMVGILGR-ARQFGAINKLLDQMVRDGCQPNVVTYNRLIHS 404
             ++R R  G + D +TYT  +    + AR + A+ +LL  M   GC  N V Y  ++  
Sbjct: 132 KVYMRMRDRGVQSDVYTYTIRIKSFCKTARPYAAL-RLLRNMPELGCDSNAVAYCTVVAG 190

Query: 405 YGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPD 464
              +   + A ++F +M      PD V +  L+ +  K G +  +  +  K+   G+ P+
Sbjct: 191 LYDSGEHDHARELFDEMLARCLCPDVVAFNKLVHVLCKKGLVFESERLLGKVLKRGVCPN 250

Query: 465 TFTYSVIINCLGKAGHLQ---------AAHQLFCEMVNQGCIPNLVTYNIMIALQAKARN 515
            FT+++ +  L + G L           A +   +MVN G  P+ +TYN +I    K   
Sbjct: 251 LFTFNIFVQGLCREGALDRAVRNSRVVEAEEYLRKMVNGGFEPDDLTYNSIIDGYCKKGM 310

Query: 516 YQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGL 575
            Q A ++ +D    GF+PD+ TY  ++      G  D A AVF +   K   P   +Y  
Sbjct: 311 VQDANRVLKDAVFKGFKPDEFTYCSLINGFCKDGDPDRAMAVFKDGLGKGLRPSIVLYNT 370

Query: 576 LVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLG 635
           L+    + G +  A +    M + G  PN+ T N +++   ++G +SDA HL+   +  G
Sbjct: 371 LIKGLSQQGLILPALQLMNEMAENGCLPNIWTYNLVINGLCKMGCVSDASHLVDDAIAKG 430

Query: 636 LKPSLQTYTLLLSCCTEARSPYDMGFCHEL 665
             P + TY  L+            G+C +L
Sbjct: 431 CPPDIFTYNTLID-----------GYCKQL 449


>gi|255660836|gb|ACU25587.1| pentatricopeptide repeat-containing protein [Lampayo castellani]
          Length = 418

 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 84/277 (30%), Positives = 149/277 (53%)

Query: 372 RARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRV 431
           + + F  +     +++  G   ++  +N L+H + +   +  A  VF ++   G  P  V
Sbjct: 113 KLKYFKLVWGFYKEILECGYPASLYFFNILMHRFCKEGEMRLAQSVFDEITKWGLRPSVV 172

Query: 432 TYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEM 491
           ++ TL++ + + G LD    +   M A+G+ PD +TYSV+IN L K   +  A++LF EM
Sbjct: 173 SFNTLMNGYIRLGDLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMNDANELFGEM 232

Query: 492 VNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYL 551
           +  G +PN VT+  +I    K  +   A++ Y++M   GF PD +TY+ ++  L   G L
Sbjct: 233 IGNGLVPNGVTFTTLIDGHCKTGSIDLAMETYKEMLRQGFSPDLITYNTLIYGLCKKGDL 292

Query: 552 DEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSL 611
            +A+ +  EM  K   PD+  Y  L+D   K G++  A  + + M++  +R +     +L
Sbjct: 293 KQAQDLIDEMSMKGLKPDKITYTTLIDGSCKEGDLETALYYRKRMIKENIRLDDVAYTAL 352

Query: 612 LSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
           +S   R GQ  DA  +L+ ML++GLKP   TYT++++
Sbjct: 353 ISGLCREGQSVDAEKMLREMLSVGLKPDNGTYTMIIN 389



 Score =  123 bits (309), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 75/227 (33%), Positives = 118/227 (51%)

Query: 381 KLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIH 440
           +L   M   G QP+V TY+ LI+   + + +N+A ++F +M   G  P+ VT+ TLID H
Sbjct: 192 RLKSAMHASGVQPDVYTYSVLINGLCKESKMNDANELFGEMIGNGLVPNGVTFTTLIDGH 251

Query: 441 AKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNL 500
            K G +D+AM+ YK+M   G SPD  TY+ +I  L K G L+ A  L  EM  +G  P+ 
Sbjct: 252 CKTGSIDLAMETYKEMLRQGFSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDK 311

Query: 501 VTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAE 560
           +TY  +I    K  + ++AL   + M       D V Y+ ++  L   G   +AE +  E
Sbjct: 312 ITYTTLIDGSCKEGDLETALYYRKRMIKENIRLDDVAYTALISGLCREGQSVDAEKMLRE 371

Query: 561 MRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPT 607
           M      PD   Y ++++ + K G+V+   +  + M + G  P V T
Sbjct: 372 MLSVGLKPDNGTYTMIINEFCKKGDVKTGSKLLKEMQRDGHVPCVVT 418



 Score =  120 bits (301), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 80/309 (25%), Positives = 150/309 (48%), Gaps = 5/309 (1%)

Query: 336 QLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNV 395
           +L+   +  GF+  +  + G+    + +  ++    +  +      + D++ + G +P+V
Sbjct: 113 KLKYFKLVWGFYKEIL-ECGYPASLYFFNILMHRFCKEGEMRLAQSVFDEITKWGLRPSV 171

Query: 396 VTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKK 455
           V++N L++ Y R   L+E   +   M   G +PD  TY  LI+   K   ++ A +++ +
Sbjct: 172 VSFNTLMNGYIRLGDLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMNDANELFGE 231

Query: 456 MQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARN 515
           M   GL P+  T++ +I+   K G +  A + + EM+ QG  P+L+TYN +I    K  +
Sbjct: 232 MIGNGLVPNGVTFTTLIDGHCKTGSIDLAMETYKEMLRQGFSPDLITYNTLIYGLCKKGD 291

Query: 516 YQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHC--GYLDEAEAVFAEMRRKNWVPDEPVY 573
            + A  L  +M   G +PDK+TY+ +++  G C  G L+ A      M ++N   D+  Y
Sbjct: 292 LKQAQDLIDEMSMKGLKPDKITYTTLID--GSCKEGDLETALYYRKRMIKENIRLDDVAY 349

Query: 574 GLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLN 633
             L+    + G    A +    ML  GL+P+  T   +++ F + G +     LL+ M  
Sbjct: 350 TALISGLCREGQSVDAEKMLREMLSVGLKPDNGTYTMIINEFCKKGDVKTGSKLLKEMQR 409

Query: 634 LGLKPSLQT 642
            G  P + T
Sbjct: 410 DGHVPCVVT 418



 Score =  108 bits (271), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 73/310 (23%), Positives = 142/310 (45%), Gaps = 18/310 (5%)

Query: 356 FKHDEHTYTTMVGILGRARQFGAINKLLDQMV------------------RDGCQPNVVT 397
           F+H  H+Y TM+  L   +       L+  +V                  +   + +V  
Sbjct: 9   FRHTLHSYCTMIHFLCTHQMLPEAKNLIQIVVSRKGKDSASAVFEAILEAKGAQRSDVYV 68

Query: 398 YNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQ 457
           ++ LI +Y  + +L++AL+ F+  +         T   +++   K  +  +    YK++ 
Sbjct: 69  FSGLITAYLESGFLHDALECFRLTREHKFWVPFDTCRKVLEHFMKLKYFKLVWGFYKEIL 128

Query: 458 AAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQ 517
             G     + ++++++   K G ++ A  +F E+   G  P++V++N ++    +  +  
Sbjct: 129 ECGYPASLYFFNILMHRFCKEGEMRLAQSVFDEITKWGLRPSVVSFNTLMNGYIRLGDLD 188

Query: 518 SALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLV 577
              +L   M  +G +PD  TYS+++  L     +++A  +F EM     VP+   +  L+
Sbjct: 189 EGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMNDANELFGEMIGNGLVPNGVTFTTLI 248

Query: 578 DLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLK 637
           D   K G++  A E Y+ ML+ G  P++ T N+L+    + G L  A  L+  M   GLK
Sbjct: 249 DGHCKTGSIDLAMETYKEMLRQGFSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLK 308

Query: 638 PSLQTYTLLL 647
           P   TYT L+
Sbjct: 309 PDKITYTTLI 318



 Score = 92.0 bits (227), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 65/279 (23%), Positives = 128/279 (45%), Gaps = 5/279 (1%)

Query: 397 TYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKM 456
           T  +++  + +  Y       +K++   G       +  L+    K G + +A  ++ ++
Sbjct: 103 TCRKVLEHFMKLKYFKLVWGFYKEILECGYPASLYFFNILMHRFCKEGEMRLAQSVFDEI 162

Query: 457 QAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNY 516
              GL P   +++ ++N   + G L    +L   M   G  P++ TY+++I    K    
Sbjct: 163 TKWGLRPSVVSFNTLMNGYIRLGDLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKM 222

Query: 517 QSALKLYRDMQNAGFEPDKVTYSIVMEVLGHC--GYLDEAEAVFAEMRRKNWVPDEPVYG 574
             A +L+ +M   G  P+ VT++ +++  GHC  G +D A   + EM R+ + PD   Y 
Sbjct: 223 NDANELFGEMIGNGLVPNGVTFTTLID--GHCKTGSIDLAMETYKEMLRQGFSPDLITYN 280

Query: 575 LLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNL 634
            L+    K G++++A +  + M   GL+P+  T  +L+    + G L  A +  + M+  
Sbjct: 281 TLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGSCKEGDLETALYYRKRMIKE 340

Query: 635 GLKPSLQTYTLLLS-CCTEARSPYDMGFCHELMAVSGHP 672
            ++     YT L+S  C E +S        E+++V   P
Sbjct: 341 NIRLDDVAYTALISGLCREGQSVDAEKMLREMLSVGLKP 379


>gi|222629056|gb|EEE61188.1| hypothetical protein OsJ_15186 [Oryza sativa Japonica Group]
          Length = 897

 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 93/311 (29%), Positives = 149/311 (47%), Gaps = 4/311 (1%)

Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLL--DQMVRDGCQPNVVTYNR 400
           A+  F+ +  +   K +   Y  ++G  G   Q      LL  D+MV  G    V TYN 
Sbjct: 569 AVKVFDEMLTKGEVKPEAVMYNALIG--GYCDQGKLDTALLYRDRMVERGVAMTVATYNL 626

Query: 401 LIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAG 460
           L+H+        EA ++ ++M   G  PD  TY  LI+ H K G +  A+++++ M   G
Sbjct: 627 LVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRG 686

Query: 461 LSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSAL 520
           +     TY+ +I  L K G +Q   +LF E V +G  P+LV YN +I   + + N   A 
Sbjct: 687 VRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAF 746

Query: 521 KLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLW 580
           ++  +M+     PD VTY+ +M  L   G +DEA  +  EM  +   PD   Y  L+  +
Sbjct: 747 EIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGY 806

Query: 581 GKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSL 640
              G+V+ A      M+  G  P + T N+L+    + GQ  DA ++++ M+  G+ P  
Sbjct: 807 SMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDD 866

Query: 641 QTYTLLLSCCT 651
            TY  L+   T
Sbjct: 867 STYISLIEGLT 877



 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 85/289 (29%), Positives = 148/289 (51%), Gaps = 2/289 (0%)

Query: 362 TYTTMV-GILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQ 420
           TY T++ G   R R   A++ + +   R G  PN  TY  +I  + +   ++EA+ VF +
Sbjct: 516 TYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDE 575

Query: 421 MQVVG-CEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAG 479
           M   G  +P+ V Y  LI  +   G LD A+    +M   G++    TY+++++ L   G
Sbjct: 576 MLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDG 635

Query: 480 HLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYS 539
               A++L  EM  +G  P++ TYNI+I    K  N + AL+++ +M   G     VTY+
Sbjct: 636 RGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYT 695

Query: 540 IVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQA 599
            ++  L   G + E + +F E  R+   PD  +Y  L++    +GN+ +A+E    M + 
Sbjct: 696 ALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKK 755

Query: 600 GLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
            + P+  T N+L+     +G++ +A  L+  M   G++P L TY  L+S
Sbjct: 756 RIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLIS 804



 Score =  140 bits (353), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 88/306 (28%), Positives = 147/306 (48%), Gaps = 1/306 (0%)

Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDG-CQPNVVTYNRL 401
           AL     +R + G   +++TY T++    +  +     K+ D+M+  G  +P  V YN L
Sbjct: 533 ALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNAL 592

Query: 402 IHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGL 461
           I  Y     L+ AL    +M   G      TY  L+      G    A ++ ++M   GL
Sbjct: 593 IGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGL 652

Query: 462 SPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALK 521
           +PD FTY+++IN   K G+++ A ++F  M  +G    +VTY  +I   +K    Q   K
Sbjct: 653 APDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDK 712

Query: 522 LYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWG 581
           L+ +    G  PD V Y+ ++      G +D A  +  EM +K   PD+  Y  L+    
Sbjct: 713 LFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLC 772

Query: 582 KAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQ 641
             G V +A +  + M + G++P++ T N+L+S +   G + DA  +   M+N G  P+L 
Sbjct: 773 LLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLL 832

Query: 642 TYTLLL 647
           TY  L+
Sbjct: 833 TYNALI 838



 Score = 88.6 bits (218), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 84/306 (27%), Positives = 133/306 (43%), Gaps = 57/306 (18%)

Query: 465 TFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYR 524
           T T+++++  L  AG    A +L  +M      PN VTYN +IA        Q+AL + R
Sbjct: 483 TTTFNIMLRHLCSAGKPARALELLRQMPR----PNAVTYNTVIAGFCSRGRVQAALDIMR 538

Query: 525 DM-QNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWV-PDEPVYGLLVDLWGK 582
           +M +  G  P++ TY  V+      G +DEA  VF EM  K  V P+  +Y  L+  +  
Sbjct: 539 EMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCD 598

Query: 583 AGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQT 642
            G +  A  + + M++ G+   V T N L+ A    G+ ++AY L++ M   GL P + T
Sbjct: 599 QGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFT 658

Query: 643 YTLLLSCCTEARSPYDMGFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMH 702
           Y +L++           G C E                        NV+  +  F  M  
Sbjct: 659 YNILIN-----------GHCKE-----------------------GNVKKALEIFENM-- 682

Query: 703 SEDRESKRGLVDAVVDF------LHKSGLKEEAGSVWEVAAQKNVYPDAVKEKGMSYWLI 756
                S+RG+   VV +      L K G  +E   +++ A ++ + PD V    +   LI
Sbjct: 683 -----SRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLV----LYNALI 733

Query: 757 NLHVMS 762
           N H  S
Sbjct: 734 NSHSTS 739


>gi|168038876|ref|XP_001771925.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162676707|gb|EDQ63186.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 831

 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 89/328 (27%), Positives = 161/328 (49%), Gaps = 1/328 (0%)

Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLI 402
           AL   N +  Q G KH+  TY+ ++    +         + + M   G +P+ +TYN L+
Sbjct: 389 ALQISNEMEDQ-GIKHNRKTYSMIIDGYVQLGDTANAFSVFEDMSNAGIKPDGITYNILM 447

Query: 403 HSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLS 462
           +++ +   +N AL++  +M+   C P   TY  +ID   K G L +A +  + M+ AG  
Sbjct: 448 NAFCKNGQMNRALELLARMESGDCPPTLRTYTIIIDGFMKIGDLRMAFETVRDMKMAGFR 507

Query: 463 PDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKL 522
           P   TY+VI++ L +AG +  A  +  EMV  G  PN  +Y  +I   A   +   A K 
Sbjct: 508 PSAATYNVIMHGLAQAGQMDRAASIIDEMVVAGVHPNERSYTTLIEGYACIGDMGLAFKY 567

Query: 523 YRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGK 582
           +  ++  G +PD + Y+ +++     G +    A+ AEM       +  +Y +L+D W +
Sbjct: 568 FNRIKEVGLKPDVIAYASLLKACCKAGRMQSTLAITAEMAAAGVPMNNYIYNILLDGWAQ 627

Query: 583 AGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQT 642
            G++ +A +  + M   GL P++ +  S ++A  + G +  A   ++ M   G++P+LQ 
Sbjct: 628 RGDMWEASDIMQKMRHEGLTPDIHSYTSFINACCKAGDMLKATETIEQMKQQGVQPNLQA 687

Query: 643 YTLLLSCCTEARSPYDMGFCHELMAVSG 670
           YT L+     A  P     C++ M  +G
Sbjct: 688 YTTLIHGWASASYPEKALICYDEMKSAG 715



 Score =  141 bits (355), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 82/299 (27%), Positives = 144/299 (48%), Gaps = 35/299 (11%)

Query: 390 GCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVA 449
           G  P VV+Y  LI+ Y +   +++AL +  +M+  G + +R TY  +ID + + G    A
Sbjct: 365 GLSPTVVSYGCLINLYSKLGKMDKALQISNEMEDQGIKHNRKTYSMIIDGYVQLGDTANA 424

Query: 450 MDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIAL 509
             +++ M  AG+ PD  TY++++N   K G +  A +L   M +  C P L TY I+I  
Sbjct: 425 FSVFEDMSNAGIKPDGITYNILMNAFCKNGQMNRALELLARMESGDCPPTLRTYTIIIDG 484

Query: 510 QAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPD 569
             K  + + A +  RDM+ AGF P   TY+++M  L   G +D A ++  EM      P+
Sbjct: 485 FMKIGDLRMAFETVRDMKMAGFRPSAATYNVIMHGLAQAGQMDRAASIIDEMVVAGVHPN 544

Query: 570 EPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLS------- 622
           E  Y  L++ +   G++  A++++  + + GL+P+V    SLL A  + G++        
Sbjct: 545 ERSYTTLIEGYACIGDMGLAFKYFNRIKEVGLKPDVIAYASLLKACCKAGRMQSTLAITA 604

Query: 623 ----------------------------DAYHLLQGMLNLGLKPSLQTYTLLLSCCTEA 653
                                       +A  ++Q M + GL P + +YT  ++ C +A
Sbjct: 605 EMAAAGVPMNNYIYNILLDGWAQRGDMWEASDIMQKMRHEGLTPDIHSYTSFINACCKA 663



 Score =  140 bits (352), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 95/385 (24%), Positives = 174/385 (45%), Gaps = 51/385 (13%)

Query: 313 LAEEALGNTNYSMDAYQANQVLKQLQDHTVALGFFNWL------------RRQAGFKHDE 360
           L E+   +    +DA++  +  KQ +DHT+ + ++                R AG + + 
Sbjct: 169 LVEDHPKDARKVVDAFKRIKKPKQ-RDHTLLVNYYGKRGDKHSARAAFESMRAAGIEPNV 227

Query: 361 HTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVT----------------------- 397
           H+YT ++     A+        +++M  +G  PN  T                       
Sbjct: 228 HSYTNLIHAYAVAQDLRGAIACVEEMEAEGVSPNAATYSVIISGYGRLGDVEAAERWFQR 287

Query: 398 ------------YNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGF 445
                       YN +IH+Y +A  +  A  +   M+  G E     Y  L+D +     
Sbjct: 288 ALSENWHHNDVIYNNIIHAYCKAGNMERAEAIMTAMEEQGLEATLGLYNMLMDGYVHCRA 347

Query: 446 LDVAMDMYKKMQA---AGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVT 502
           +D  ++++++++A    GLSP   +Y  +IN   K G +  A Q+  EM +QG   N  T
Sbjct: 348 VDKCLNVFRRLKARTETGLSPTVVSYGCLINLYSKLGKMDKALQISNEMEDQGIKHNRKT 407

Query: 503 YNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMR 562
           Y+++I    +  +  +A  ++ DM NAG +PD +TY+I+M      G ++ A  + A M 
Sbjct: 408 YSMIIDGYVQLGDTANAFSVFEDMSNAGIKPDGITYNILMNAFCKNGQMNRALELLARME 467

Query: 563 RKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLS 622
             +  P    Y +++D + K G++R A+E    M  AG RP+  T N ++    + GQ+ 
Sbjct: 468 SGDCPPTLRTYTIIIDGFMKIGDLRMAFETVRDMKMAGFRPSAATYNVIMHGLAQAGQMD 527

Query: 623 DAYHLLQGMLNLGLKPSLQTYTLLL 647
            A  ++  M+  G+ P+ ++YT L+
Sbjct: 528 RAASIIDEMVVAGVHPNERSYTTLI 552



 Score =  124 bits (312), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 75/260 (28%), Positives = 136/260 (52%), Gaps = 3/260 (1%)

Query: 392 QPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMD 451
           +P    +  L++ YG+    + A   F+ M+  G EP+  +Y  LI  +A A  L  A+ 
Sbjct: 189 KPKQRDHTLLVNYYGKRGDKHSARAAFESMRAAGIEPNVHSYTNLIHAYAVAQDLRGAIA 248

Query: 452 MYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQA 511
             ++M+A G+SP+  TYSVII+  G+ G ++AA + F   +++    N V YN +I    
Sbjct: 249 CVEEMEAEGVSPNAATYSVIISGYGRLGDVEAAERWFQRALSENWHHNDVIYNNIIHAYC 308

Query: 512 KARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEP 571
           KA N + A  +   M+  G E     Y+++M+   HC  +D+   VF  ++ +      P
Sbjct: 309 KAGNMERAEAIMTAMEEQGLEATLGLYNMLMDGYVHCRAVDKCLNVFRRLKARTETGLSP 368

Query: 572 V---YGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLL 628
               YG L++L+ K G + KA +    M   G++ N  T + ++  ++++G  ++A+ + 
Sbjct: 369 TVVSYGCLINLYSKLGKMDKALQISNEMEDQGIKHNRKTYSMIIDGYVQLGDTANAFSVF 428

Query: 629 QGMLNLGLKPSLQTYTLLLS 648
           + M N G+KP   TY +L++
Sbjct: 429 EDMSNAGIKPDGITYNILMN 448



 Score = 60.8 bits (146), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 35/158 (22%), Positives = 70/158 (44%)

Query: 498 PNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAV 557
           P    + +++    K  +  SA   +  M+ AG EP+  +Y+ ++        L  A A 
Sbjct: 190 PKQRDHTLLVNYYGKRGDKHSARAAFESMRAAGIEPNVHSYTNLIHAYAVAQDLRGAIAC 249

Query: 558 FAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLR 617
             EM  +   P+   Y +++  +G+ G+V  A  W++  L      N    N+++ A+ +
Sbjct: 250 VEEMEAEGVSPNAATYSVIISGYGRLGDVEAAERWFQRALSENWHHNDVIYNNIIHAYCK 309

Query: 618 VGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARS 655
            G +  A  ++  M   GL+ +L  Y +L+      R+
Sbjct: 310 AGNMERAEAIMTAMEEQGLEATLGLYNMLMDGYVHCRA 347


>gi|326518288|dbj|BAJ88173.1| predicted protein [Hordeum vulgare subsp. vulgare]
 gi|326527987|dbj|BAJ89045.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 706

 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 117/500 (23%), Positives = 218/500 (43%), Gaps = 17/500 (3%)

Query: 354 AGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQ--PNVVTYNRLIHSYGRANYL 411
           +G   D  TY+T++    R RQF    +  ++M   G    P+ VTY+ ++  Y +    
Sbjct: 204 SGVPLDNITYSTLITAARRCRQFAKAVEWFERMYSPGSAVLPDEVTYSAVLDVYAQLRMK 263

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
            E L +F + +  G +PD V +  L  +  +AG  D    ++K+M+  G  P+ F Y+ +
Sbjct: 264 EEVLALFDRARGSGWKPDHVAFAVLAKMFGEAGDYDGIQFVFKEMREVGTKPNIFVYNAL 323

Query: 472 INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF 531
           +  LGK G    A  LF EM  +G  PN  T   +  +  +AR  + AL+L+  M+    
Sbjct: 324 LEALGKTGKPGLARNLFEEMTAEGVEPNARTLTAVAKIYGRARWGRDALQLWDQMREKKI 383

Query: 532 EPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWV----PDEPVYGLLVDLWGKAGNVR 587
             D +  + ++ +    G + EAE +F EM+  +      PD+  Y  +++++G   +  
Sbjct: 384 PADSILCNTLLSMCADVGLVAEAEQLFEEMKDPDLTDVPQPDKWSYTAMINIYGSIKDAD 443

Query: 588 KAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
           +A + +  MLQ+G+  N+ +   ++    +  ++ DA  +L+  L  GLKP  +    LL
Sbjct: 444 RALQLFVEMLQSGIEANIMSYTIVIQCLGKANRIRDAVEVLEAGLERGLKPDDRLCGCLL 503

Query: 648 SCCTEARSPYDMGFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLE-MMHSEDR 706
           S           G   EL+       +  L+ +     D Q   D +   L+ ++++ + 
Sbjct: 504 SVVA-----LSTGEETELVLACLEKFNRNLVKLIRMLGDDQVGADELKEQLKAVLNAAET 558

Query: 707 ESKRGLVDAVVDFLHKSGLK-EEAGSVWEVAAQKNVYPDAVKEKGMSYWLINLHVMSDGT 765
           + +R   + ++D     GL       ++ +A    +Y   +  +    WL++L  +S G 
Sbjct: 559 DVRRPYCNCLIDICQNHGLPARRPRELFRLAQGYGLY-SKLHIRKDDEWLLDLRSLSVGA 617

Query: 766 AVIALSRTLAWFRKQMLISGVGPSRIDIVTGWGRRSRVTGTSLVRQAVQELLHMFSFPFF 825
           A  A    +A  +++ +     P   ++ TG        G +    A    L   + PF 
Sbjct: 618 AKTAFDDWMAALKERAVQGQTLPQSFNVFTGSSTHKFAQGLA---SAFAAHLEEAAAPFR 674

Query: 826 TENGNSGCFVGCGEPLNKWL 845
                 G FV   + L  WL
Sbjct: 675 PSESQVGSFVSSRDELVLWL 694



 Score = 94.7 bits (234), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 56/198 (28%), Positives = 99/198 (50%), Gaps = 2/198 (1%)

Query: 459 AGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQS 518
           AG + DT  ++V +  L  A     A +L  +MV+ G   + +TY+ +I    + R +  
Sbjct: 169 AGFAVDTILFNVALKSLRAARRWDEAERLALDMVDSGVPLDNITYSTLITAARRCRQFAK 228

Query: 519 ALKLYRDMQNAG--FEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLL 576
           A++ +  M + G    PD+VTYS V++V       +E  A+F   R   W PD   + +L
Sbjct: 229 AVEWFERMYSPGSAVLPDEVTYSAVLDVYAQLRMKEEVLALFDRARGSGWKPDHVAFAVL 288

Query: 577 VDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGL 636
             ++G+AG+       ++ M + G +PN+   N+LL A  + G+   A +L + M   G+
Sbjct: 289 AKMFGEAGDYDGIQFVFKEMREVGTKPNIFVYNALLEALGKTGKPGLARNLFEEMTAEGV 348

Query: 637 KPSLQTYTLLLSCCTEAR 654
           +P+ +T T +      AR
Sbjct: 349 EPNARTLTAVAKIYGRAR 366



 Score = 43.9 bits (102), Expect = 0.41,   Method: Compositional matrix adjust.
 Identities = 46/223 (20%), Positives = 90/223 (40%), Gaps = 6/223 (2%)

Query: 528 NAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVR 587
           +AGF  D + +++ ++ L      DEAE +  +M       D   Y  L+    +     
Sbjct: 168 DAGFAVDTILFNVALKSLRAARRWDEAERLALDMVDSGVPLDNITYSTLITAARRCRQFA 227

Query: 588 KAWEWYEAMLQAG--LRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTL 645
           KA EW+E M   G  + P+  T +++L  + ++    +   L       G KP    + +
Sbjct: 228 KAVEWFERMYSPGSAVLPDEVTYSAVLDVYAQLRMKEEVLALFDRARGSGWKPDHVAFAV 287

Query: 646 LLSCCTEARSPYDMGFCHELMAVSGHPAHMFLLS--MPSPGPDGQNVRDHVGSFLEMMHS 703
           L     EA     + F  + M   G   ++F+ +  + + G  G+       +  E M +
Sbjct: 288 LAKMFGEAGDYDGIQFVFKEMREVGTKPNIFVYNALLEALGKTGKP--GLARNLFEEMTA 345

Query: 704 EDRESKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAV 746
           E  E     + AV     ++    +A  +W+   +K +  D++
Sbjct: 346 EGVEPNARTLTAVAKIYGRARWGRDALQLWDQMREKKIPADSI 388


>gi|302753732|ref|XP_002960290.1| hypothetical protein SELMODRAFT_73828 [Selaginella moellendorffii]
 gi|300171229|gb|EFJ37829.1| hypothetical protein SELMODRAFT_73828 [Selaginella moellendorffii]
          Length = 546

 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 89/313 (28%), Positives = 165/313 (52%), Gaps = 2/313 (0%)

Query: 339 DHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTY 398
           D   +L   +W+  + G+      Y  ++  + RARQ+     L+ +MV     P+  T+
Sbjct: 4   DWQRSLALHDWMIEKGGYAPSIFAYNVVLKNVLRARQWELAEGLVLEMVEKDLVPDKFTF 63

Query: 399 NRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQA 458
           + LI  YGRAN L +A+   ++M+  G +PD V + TLI++  K      A  ++ K++A
Sbjct: 64  STLISGYGRANRLEDAMGWLQEMEAGGIKPDLVIFSTLIELAGKVKDYSKATSLFSKLKA 123

Query: 459 AGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQS 518
           +G++PD   Y+ +IN  GKA   + A  L  EM   G +P+ V+Y I+I   A+++ Y  
Sbjct: 124 SGIAPDKVIYNSMINLYGKAKFYKEAQGLLAEMKEAGLMPDTVSYTILINAYAESQKYLE 183

Query: 519 ALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPV-YGLLV 577
           A +++ +M+  G + D  T +++++V G    + +AE +F  M +   +    V Y  ++
Sbjct: 184 AKQVFLEMKTKGIQLDVTTCNMMIDVYGKLEMVRDAEELFWSMSKTLGIQQNVVTYNTMI 243

Query: 578 DLWGKAGNVRKAWE-WYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGL 636
            ++ +A  + +A+  +Y    + G+ PNV T N++L       Q   A  L++ M   G+
Sbjct: 244 KVYKEAELLSEAFNVFYYMQNKGGVEPNVITYNTILFLHGLTLQHEKAMRLVRKMQQRGI 303

Query: 637 KPSLQTYTLLLSC 649
           +P+  TY+ L+S 
Sbjct: 304 EPNAVTYSTLISI 316



 Score =  137 bits (346), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 92/356 (25%), Positives = 166/356 (46%), Gaps = 34/356 (9%)

Query: 336 QLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNV 395
           +++D++ A   F+ L+  +G   D+  Y +M+ + G+A+ +     LL +M   G  P+ 
Sbjct: 107 KVKDYSKATSLFSKLK-ASGIAPDKVIYNSMINLYGKAKFYKEAQGLLAEMKEAGLMPDT 165

Query: 396 VTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKK 455
           V+Y  LI++Y  +    EA  VF +M+  G + D  T   +ID++ K   +  A +++  
Sbjct: 166 VSYTILINAYAESQKYLEAKQVFLEMKTKGIQLDVTTCNMMIDVYGKLEMVRDAEELFWS 225

Query: 456 M-QAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCI-PNLVTYNIMIALQAKA 513
           M +  G+  +  TY+ +I    +A  L  A  +F  M N+G + PN++TYN ++ L    
Sbjct: 226 MSKTLGIQQNVVTYNTMIKVYKEAELLSEAFNVFYYMQNKGGVEPNVITYNTILFLHGLT 285

Query: 514 RNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVY 573
             ++ A++L R MQ  G EP+ VTYS ++ + G  G  D A  +F  +R K +  DE +Y
Sbjct: 286 LQHEKAMRLVRKMQQRGIEPNAVTYSTLISIYGKTGKYDRAAFLFKTLREKGFEMDEILY 345

Query: 574 GLLVDLWGKAGNVRKAWEWYEAMLQAGLRP------------------------------ 603
             ++ ++ +AG V  A    E + Q  + P                              
Sbjct: 346 QSMIVVYERAGLVAHAKRLLEELKQPDIVPRDTAISILAKAEKLEEAAKLYWRSHEAGEI 405

Query: 604 -NVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYD 658
               T  S++  F+R  +  +A  + + M   G  P  +T  +LL+   + R   D
Sbjct: 406 KESVTYKSMIQLFVRNKRSKNAIDVFENMRESGFLPDSETTVVLLAAYGQLRQLED 461



 Score =  123 bits (308), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 77/300 (25%), Positives = 155/300 (51%), Gaps = 5/300 (1%)

Query: 332 QVLKQLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGC 391
           +V K+ +  + A   F +++ + G + +  TY T++ + G   Q     +L+ +M + G 
Sbjct: 244 KVYKEAELLSEAFNVFYYMQNKGGVEPNVITYNTILFLHGLTLQHEKAMRLVRKMQQRGI 303

Query: 392 QPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMD 451
           +PN VTY+ LI  YG+    + A  +FK ++  G E D + Y ++I ++ +AG +  A  
Sbjct: 304 EPNAVTYSTLISIYGKTGKYDRAAFLFKTLREKGFEMDEILYQSMIVVYERAGLVAHAKR 363

Query: 452 MYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQA 511
           + ++++     PD       I+ L KA  L+ A +L+      G I   VTY  MI L  
Sbjct: 364 LLEELK----QPDIVPRDTAISILAKAEKLEEAAKLYWRSHEAGEIKESVTYKSMIQLFV 419

Query: 512 KARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEP 571
           + +  ++A+ ++ +M+ +GF PD  T  +++   G    L++AE ++ +MR +    ++ 
Sbjct: 420 RNKRSKNAIDVFENMRESGFLPDSETTVVLLAAYGQLRQLEDAEKLYLDMRERGCTLEKE 479

Query: 572 VYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGM 631
           V+  ++ L+G A  +R+A + + A+   GL  +     +++  + R  +L++A  L   M
Sbjct: 480 VHFQMLKLYGDARKIREAEDMFAALKLEGLDGD-ELYLTMIRIYERASKLNEASRLFSEM 538



 Score =  118 bits (295), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 88/334 (26%), Positives = 153/334 (45%), Gaps = 9/334 (2%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRD-GCQPNVVTYNRLIHSYGRANY 410
           +  G + D  T   M+ + G+        +L   M +  G Q NVVTYN +I  Y  A  
Sbjct: 192 KTKGIQLDVTTCNMMIDVYGKLEMVRDAEELFWSMSKTLGIQQNVVTYNTMIKVYKEAEL 251

Query: 411 LNEALDVFKQMQVVG-CEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYS 469
           L+EA +VF  MQ  G  EP+ +TY T++ +H      + AM + +KMQ  G+ P+  TYS
Sbjct: 252 LSEAFNVFYYMQNKGGVEPNVITYNTILFLHGLTLQHEKAMRLVRKMQQRGIEPNAVTYS 311

Query: 470 VIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNA 529
            +I+  GK G    A  LF  +  +G   + + Y  MI +  +A     A +L  +++  
Sbjct: 312 TLISIYGKTGKYDRAAFLFKTLREKGFEMDEILYQSMIVVYERAGLVAHAKRLLEELK-- 369

Query: 530 GFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKA 589
             +PD V     + +L     L+EA  ++        + +   Y  ++ L+ +    + A
Sbjct: 370 --QPDIVPRDTAISILAKAEKLEEAAKLYWRSHEAGEIKESVTYKSMIQLFVRNKRSKNA 427

Query: 590 WEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSC 649
            + +E M ++G  P+  T   LL+A+ ++ QL DA  L   M   G     + +  +L  
Sbjct: 428 IDVFENMRESGFLPDSETTVVLLAAYGQLRQLEDAEKLYLDMRERGCTLEKEVHFQMLKL 487

Query: 650 CTEA---RSPYDMGFCHELMAVSGHPAHMFLLSM 680
             +A   R   DM    +L  + G   ++ ++ +
Sbjct: 488 YGDARKIREAEDMFAALKLEGLDGDELYLTMIRI 521


>gi|125548468|gb|EAY94290.1| hypothetical protein OsI_16061 [Oryza sativa Indica Group]
          Length = 586

 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 100/365 (27%), Positives = 184/365 (50%), Gaps = 11/365 (3%)

Query: 325 MDAYQANQVLKQL----QDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAIN 380
           ++AY  N+++  L    + H V   F  W++ +  +  D  ++  ++  + R  Q     
Sbjct: 216 VEAYAYNKLMSSLIGRGRVHDVVALFERWIQDRV-YSPDVWSFNVVIKGVCRVGQVQKAL 274

Query: 381 KLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVG-CEPDRVTYCTLIDI 439
           +L+++M   GC P+ VT+N ++    R N ++   +V +++Q  G C P+ VT+ ++I  
Sbjct: 275 ELVERMNEFGCSPDTVTHNIIVDGLCRTNEVSRGHEVLRRLQRDGVCMPNVVTFTSVISG 334

Query: 440 HAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPN 499
           + KAG L+ AM +Y  M A+G+ P+T TY+V+IN  GK G L +A +++ +M    C P+
Sbjct: 335 YCKAGKLEDAMAVYNDMVASGIMPNTVTYNVLINGYGKVGDLGSAVEVYQQMTRLRCPPD 394

Query: 500 LVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFA 559
           +VT++ +I    +      AL+++ DM     +P+  T+SI++  L      DEA  +  
Sbjct: 395 VVTFSSLIDGYCRCGQLDDALRIWSDMAQHRIQPNVYTFSIIIHSLCKQNRSDEAICLLN 454

Query: 560 EMR-RKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRV 618
           E+  R +  P   +Y  ++D+  K G V +A    + M + G RP+  T   L+  +   
Sbjct: 455 ELNLRPDIAPQAFIYNPVIDVLCKCGKVDEANLIRKGMEEKGCRPDKYTYTILIIGYCMK 514

Query: 619 GQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGFCHELMAVSGHPAHMFLL 678
            ++S+A      M+  G  P   T    +SC  +A  P ++   H +   SG  +   + 
Sbjct: 515 SRISEAIMFFHEMVEAGCSPDSITVNCFISCLLKAGMPNEVD--HVMRLASGGASS--IQ 570

Query: 679 SMPSP 683
             PSP
Sbjct: 571 EFPSP 575



 Score =  120 bits (301), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 88/369 (23%), Positives = 165/369 (44%), Gaps = 39/369 (10%)

Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLI 402
           AL  F+ +    G+  D    + +V     A    A   LL +    GC+     YN+L+
Sbjct: 166 ALQLFDQMTTHYGYSPDARFLSFLVSSCTCANLLDASATLLSKASEFGCRVEAYAYNKLM 225

Query: 403 HSYGRANYLNEALDVFKQ-MQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGL 461
            S      +++ + +F++ +Q     PD  ++  +I    + G +  A+++ ++M   G 
Sbjct: 226 SSLIGRGRVHDVVALFERWIQDRVYSPDVWSFNVVIKGVCRVGQVQKALELVERMNEFGC 285

Query: 462 SPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQG-CIPNLVTYNIMIALQAKARNYQSAL 520
           SPDT T+++I++ L +   +   H++   +   G C+PN+VT+  +I+   KA   + A+
Sbjct: 286 SPDTVTHNIIVDGLCRTNEVSRGHEVLRRLQRDGVCMPNVVTFTSVISGYCKAGKLEDAM 345

Query: 521 KLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLW 580
            +Y DM  +G  P+ VTY++++   G  G L  A  V+ +M R    PD   +  L+D +
Sbjct: 346 AVYNDMVASGIMPNTVTYNVLINGYGKVGDLGSAVEVYQQMTRLRCPPDVVTFSSLIDGY 405

Query: 581 GKAGNVRKAWEWYEAMLQAGLRPNVPT--------C------------------------ 608
            + G +  A   +  M Q  ++PNV T        C                        
Sbjct: 406 CRCGQLDDALRIWSDMAQHRIQPNVYTFSIIIHSLCKQNRSDEAICLLNELNLRPDIAPQ 465

Query: 609 ----NSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYT-LLLSCCTEARSPYDMGFCH 663
               N ++    + G++ +A  + +GM   G +P   TYT L++  C ++R    + F H
Sbjct: 466 AFIYNPVIDVLCKCGKVDEANLIRKGMEEKGCRPDKYTYTILIIGYCMKSRISEAIMFFH 525

Query: 664 ELMAVSGHP 672
           E++     P
Sbjct: 526 EMVEAGCSP 534



 Score =  115 bits (288), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 97/389 (24%), Positives = 178/389 (45%), Gaps = 41/389 (10%)

Query: 361 HTYTTMVGILGRA-RQFGAINKLLDQMVRD-GCQPNVVTYNRLIHSYGRANYLNEALDVF 418
           H+   ++ +L R+ RQ  A+ +L DQM    G  P+    + L+ S   AN L+ +  + 
Sbjct: 148 HSCQQIIVVLCRSGRQADAL-QLFDQMTTHYGYSPDARFLSFLVSSCTCANLLDASATLL 206

Query: 419 KQMQVVGCEPDRVTYCTLID-IHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGK 477
            +    GC  +   Y  L+  +  +    DV     + +Q    SPD ++++V+I  + +
Sbjct: 207 SKASEFGCRVEAYAYNKLMSSLIGRGRVHDVVALFERWIQDRVYSPDVWSFNVVIKGVCR 266

Query: 478 AGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF-EPDKV 536
            G +Q A +L   M   GC P+ VT+NI++    +        ++ R +Q  G   P+ V
Sbjct: 267 VGQVQKALELVERMNEFGCSPDTVTHNIIVDGLCRTNEVSRGHEVLRRLQRDGVCMPNVV 326

Query: 537 TYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAM 596
           T++ V+      G L++A AV+ +M     +P+   Y +L++ +GK G++  A E Y+ M
Sbjct: 327 TFTSVISGYCKAGKLEDAMAVYNDMVASGIMPNTVTYNVLINGYGKVGDLGSAVEVYQQM 386

Query: 597 LQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL-SCCTEARS 655
            +    P+V T +SL+  + R GQL DA  +   M    ++P++ T+++++ S C + RS
Sbjct: 387 TRLRCPPDVVTFSSLIDGYCRCGQLDDALRIWSDMAQHRIQPNVYTFSIIIHSLCKQNRS 446

Query: 656 PYDMGFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRESKRGLVDA 715
              +   +EL                       N+R             D   +  + + 
Sbjct: 447 DEAICLLNEL-----------------------NLR------------PDIAPQAFIYNP 471

Query: 716 VVDFLHKSGLKEEAGSVWEVAAQKNVYPD 744
           V+D L K G  +EA  + +   +K   PD
Sbjct: 472 VIDVLCKCGKVDEANLIRKGMEEKGCRPD 500


>gi|414874052|tpg|DAA52609.1| TPA: hypothetical protein ZEAMMB73_367214 [Zea mays]
          Length = 716

 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 88/295 (29%), Positives = 151/295 (51%)

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
           Q G   D  TY+++V  L +AR  G     L QMV  G  P+  TYN LI+ Y       
Sbjct: 251 QRGIPPDLVTYSSVVHALCKARAMGKAEAFLRQMVNKGVLPDNWTYNNLIYGYSSTGQWK 310

Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
           EA+ VFK+M+     PD VT   L+    K G +  A D++  M   G +PD F+Y +++
Sbjct: 311 EAVRVFKEMRRHSILPDVVTLNMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYKIML 370

Query: 473 NCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFE 532
           N     G L     LF  M+  G  P++ T++++I   A       A+ ++ +M++ G +
Sbjct: 371 NGYATKGCLVDMTDLFDLMLGDGIAPDIYTFSVLIKAYANCGMLDKAMIIFNEMRDHGVK 430

Query: 533 PDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEW 592
           PD VTY+ V+  L   G +D+A   F +M  +   PD+  Y  L+  +   G++ KA E 
Sbjct: 431 PDVVTYTTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKEL 490

Query: 593 YEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
              ++  G+R ++   +S+++   ++G++ DA ++    +N+G  P    Y++L+
Sbjct: 491 ILEIMNNGMRLDIVFFSSIINNLCKLGRIMDAQNIFDLTVNVGQHPDAVVYSMLM 545



 Score =  147 bits (372), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 125/487 (25%), Positives = 233/487 (47%), Gaps = 30/487 (6%)

Query: 342 VALGFFNWLRRQAGFKHDEHTYTTMV-GILGRARQFGAINKLLDQMVRDGCQPNVVTYNR 400
           +AL FF  L R  G + D      ++ G     R   A++ LL +    GC P+V +Y+ 
Sbjct: 133 LALAFFGQLLR-TGLRVDIIIANHLLKGFCEAKRTDEALDILLHRTPELGCVPDVFSYSI 191

Query: 401 LIHSYGRANYLNEALDVFKQMQVVG--CEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQA 458
           L+ S        +A D+ + M   G  C PD V Y T+ID   K G ++ A D++K+M  
Sbjct: 192 LLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYTTVIDCFFKEGDVNKACDLFKEMVQ 251

Query: 459 AGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQS 518
            G+ PD  TYS +++ L KA  +  A     +MVN+G +P+  TYN +I   +    ++ 
Sbjct: 252 RGIPPDLVTYSSVVHALCKARAMGKAEAFLRQMVNKGVLPDNWTYNNLIYGYSSTGQWKE 311

Query: 519 ALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVD 578
           A++++++M+     PD VT +++M  L   G + EA  VF  M  K   PD   Y ++++
Sbjct: 312 AVRVFKEMRRHSILPDVVTLNMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYKIMLN 371

Query: 579 LWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKP 638
            +   G +    + ++ ML  G+ P++ T + L+ A+   G L  A  +   M + G+KP
Sbjct: 372 GYATKGCLVDMTDLFDLMLGDGIAPDIYTFSVLIKAYANCGMLDKAMIIFNEMRDHGVKP 431

Query: 639 SLQTYTLLLSC-CTEARSPYDMGFCHELM----AVSGHPAHMFLLSMPSPGPDGQNVRDH 693
            + TYT +++  C   +    M   ++++    A   +  H  +    + G    ++   
Sbjct: 432 DVVTYTTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHG----SLLKA 487

Query: 694 VGSFLEMMHSEDRESKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAVKEKGMSY 753
               LE+M++  R        ++++ L K G   +A +++++      +PDAV       
Sbjct: 488 KELILEIMNNGMRLDIV-FFSSIINNLCKLGRIMDAQNIFDLTVNVGQHPDAVV------ 540

Query: 754 WLINLHVMSDGTAVIA-LSRTLAWFRKQMLISGVGPSRI---DIVTGWGRRSRV-TGTSL 808
                 ++ DG  ++  + + L  F   M+ +G+ P+ +    +V G+ +  R+  G SL
Sbjct: 541 ----YSMLMDGYCLVGKMEKALRVF-DAMVSAGIEPNVVVYGTLVNGYCKIGRIDEGLSL 595

Query: 809 VRQAVQE 815
            R+ +Q+
Sbjct: 596 FREMLQK 602



 Score =  131 bits (330), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 79/271 (29%), Positives = 136/271 (50%), Gaps = 4/271 (1%)

Query: 379 INKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLID 438
           +  L D M+ DG  P++ T++ LI +Y     L++A+ +F +M+  G +PD VTY T+I 
Sbjct: 382 MTDLFDLMLGDGIAPDIYTFSVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYTTVIA 441

Query: 439 IHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIP 498
              + G +D AM+ + +M   G++PD + Y  +I      G L  A +L  E++N G   
Sbjct: 442 ALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELILEIMNNGMRL 501

Query: 499 NLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHC--GYLDEAEA 556
           ++V ++ +I    K      A  ++    N G  PD V YS++M+  G+C  G +++A  
Sbjct: 502 DIVFFSSIINNLCKLGRIMDAQNIFDLTVNVGQHPDAVVYSMLMD--GYCLVGKMEKALR 559

Query: 557 VFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFL 616
           VF  M      P+  VYG LV+ + K G + +    +  MLQ G++P+    N ++    
Sbjct: 560 VFDAMVSAGIEPNVVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLF 619

Query: 617 RVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
             G+   A      M   G+  +  TY ++L
Sbjct: 620 VAGRTVPAKVKFHEMTESGIAINKCTYNIVL 650



 Score =  115 bits (288), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 78/302 (25%), Positives = 142/302 (47%), Gaps = 4/302 (1%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           G   D +T++ ++              + ++M   G +P+VVTY  +I +  R   +++A
Sbjct: 393 GIAPDIYTFSVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYTTVIAALCRIGKMDDA 452

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
           ++ F QM   G  PD+  Y  LI      G L  A ++  ++   G+  D   +S IIN 
Sbjct: 453 MEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELILEIMNNGMRLDIVFFSSIINN 512

Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPD 534
           L K G +  A  +F   VN G  P+ V Y++++         + AL+++  M +AG EP+
Sbjct: 513 LCKLGRIMDAQNIFDLTVNVGQHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPN 572

Query: 535 KVTYSIVMEVLGHC--GYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEW 592
            V Y  ++   G+C  G +DE  ++F EM +K   P   +Y +++D    AG    A   
Sbjct: 573 VVVYGTLVN--GYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFVAGRTVPAKVK 630

Query: 593 YEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTE 652
           +  M ++G+  N  T N +L  F +     +A  L + +  + +K  + T   +++   +
Sbjct: 631 FHEMTESGIAINKCTYNIVLRGFFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQ 690

Query: 653 AR 654
            R
Sbjct: 691 TR 692



 Score =  101 bits (252), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 78/323 (24%), Positives = 134/323 (41%), Gaps = 38/323 (11%)

Query: 361 HTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVF-K 419
           HTY  ++    RA +         Q++R G + +++  N L+  +  A   +EALD+   
Sbjct: 116 HTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDIIIANHLLKGFCEAKRTDEALDILLH 175

Query: 420 QMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAG--LSPDTFTYSVIINCLGK 477
           +   +GC PD  +Y  L+      G    A D+ + M   G   SPD   Y+ +I+C  K
Sbjct: 176 RTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYTTVIDCFFK 235

Query: 478 AGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVT 537
            G            VN+ C                         L+++M   G  PD VT
Sbjct: 236 EGD-----------VNKAC------------------------DLFKEMVQRGIPPDLVT 260

Query: 538 YSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAML 597
           YS V+  L     + +AEA   +M  K  +PD   Y  L+  +   G  ++A   ++ M 
Sbjct: 261 YSSVVHALCKARAMGKAEAFLRQMVNKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMR 320

Query: 598 QAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPY 657
           +  + P+V T N L+ +  + G++ +A  +   M   G  P + +Y ++L+         
Sbjct: 321 RHSILPDVVTLNMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYKIMLNGYATKGCLV 380

Query: 658 DMGFCHELMAVSGHPAHMFLLSM 680
           DM    +LM   G    ++  S+
Sbjct: 381 DMTDLFDLMLGDGIAPDIYTFSV 403



 Score =  100 bits (249), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 70/300 (23%), Positives = 139/300 (46%), Gaps = 1/300 (0%)

Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLI 402
           A+  FN +R   G K D  TYTT++  L R  +     +  +QM+  G  P+   Y+ LI
Sbjct: 417 AMIIFNEMRDH-GVKPDVVTYTTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLI 475

Query: 403 HSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLS 462
             +     L +A ++  ++   G   D V + ++I+   K G +  A +++      G  
Sbjct: 476 QGFCTHGSLLKAKELILEIMNNGMRLDIVFFSSIINNLCKLGRIMDAQNIFDLTVNVGQH 535

Query: 463 PDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKL 522
           PD   YS++++     G ++ A ++F  MV+ G  PN+V Y  ++    K       L L
Sbjct: 536 PDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYGTLVNGYCKIGRIDEGLSL 595

Query: 523 YRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGK 582
           +R+M   G +P  + Y+I+++ L   G    A+  F EM       ++  Y +++  + K
Sbjct: 596 FREMLQKGIKPSTILYNIIIDGLFVAGRTVPAKVKFHEMTESGIAINKCTYNIVLRGFFK 655

Query: 583 AGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQT 642
                +A   ++ +    ++ ++ T N++++   +  ++ +A  L   +   GL P + T
Sbjct: 656 NRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCVVT 715



 Score = 76.3 bits (186), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 51/190 (26%), Positives = 96/190 (50%), Gaps = 3/190 (1%)

Query: 461 LSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSAL 520
           LSP + TY+++++C  +A   + A   F +++  G   +++  N ++    +A+    AL
Sbjct: 111 LSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDIIIANHLLKGFCEAKRTDEAL 170

Query: 521 K-LYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWV--PDEPVYGLLV 577
             L       G  PD  +YSI+++ L   G   +A+ +   M     V  PD   Y  ++
Sbjct: 171 DILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYTTVI 230

Query: 578 DLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLK 637
           D + K G+V KA + ++ M+Q G+ P++ T +S++ A  +   +  A   L+ M+N G+ 
Sbjct: 231 DCFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMGKAEAFLRQMVNKGVL 290

Query: 638 PSLQTYTLLL 647
           P   TY  L+
Sbjct: 291 PDNWTYNNLI 300


>gi|147771991|emb|CAN69054.1| hypothetical protein VITISV_022964 [Vitis vinifera]
          Length = 586

 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 89/285 (31%), Positives = 154/285 (54%)

Query: 363 YTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQ 422
           ++T+V  L +  +    + ++D M++ G +PNVVTYN L+  +   + ++EA+ VF  M 
Sbjct: 281 FSTVVDALCKEGKVMEAHDVVDMMIKRGVEPNVVTYNALMDGHCLRSEMDEAVKVFDTMV 340

Query: 423 VVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQ 482
             G  PD V+Y TLI+ + K   ++ AM ++++M    L P+T TYS +++ L   G LQ
Sbjct: 341 CKGFAPDVVSYSTLINGYCKIQRIEKAMYLFEEMCRKELIPNTVTYSTLMHGLCHVGRLQ 400

Query: 483 AAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVM 542
            A  LF EMV +G IP+ V+Y I++    K R    A+ L + ++ +  +PD   Y+IV+
Sbjct: 401 DAIALFHEMVTRGQIPDFVSYCILLDYLCKNRRLDEAIALLKAIEGSNMDPDIQIYTIVI 460

Query: 543 EVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLR 602
           + +   G L+ A  +F+ +  K   P+   Y ++++   + G + +A + +  M + G  
Sbjct: 461 DGMCRAGELEAARDLFSNLSSKGLHPNVWTYTIMINGLCQQGLLAEASKLFGEMKRKGYS 520

Query: 603 PNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
           PN  T N +   FLR  +      LLQ ML  G    + T T+L+
Sbjct: 521 PNGCTYNLITRGFLRNNETLRGIQLLQEMLARGFSADVSTSTVLV 565



 Score =  145 bits (367), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 99/344 (28%), Positives = 163/344 (47%), Gaps = 8/344 (2%)

Query: 303 RILRQWKWGPLAEEALGNTNYSMDAYQANQVLKQLQDHTVALGFFNWLRRQAGFKHDEHT 362
           R+LR  + G    + +  T+      +  QV       T A   F+ +  Q G      T
Sbjct: 194 RLLRSMEQGNCQPDVVVYTSIIDSLCKDRQV-------TQAFNLFSEMIHQ-GISPSIFT 245

Query: 363 YTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQ 422
           Y +++  L    ++  +  LL++MV     PNVV ++ ++ +  +   + EA DV   M 
Sbjct: 246 YNSLIHALCNLCEWKHVTALLNEMVNSKIMPNVVIFSTVVDALCKEGKVMEAHDVVDMMI 305

Query: 423 VVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQ 482
             G EP+ VTY  L+D H     +D A+ ++  M   G +PD  +YS +IN   K   ++
Sbjct: 306 KRGVEPNVVTYNALMDGHCLRSEMDEAVKVFDTMVCKGFAPDVVSYSTLINGYCKIQRIE 365

Query: 483 AAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVM 542
            A  LF EM  +  IPN VTY+ ++         Q A+ L+ +M   G  PD V+Y I++
Sbjct: 366 KAMYLFEEMCRKELIPNTVTYSTLMHGLCHVGRLQDAIALFHEMVTRGQIPDFVSYCILL 425

Query: 543 EVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLR 602
           + L     LDEA A+   +   N  PD  +Y +++D   +AG +  A + +  +   GL 
Sbjct: 426 DYLCKNRRLDEAIALLKAIEGSNMDPDIQIYTIVIDGMCRAGELEAARDLFSNLSSKGLH 485

Query: 603 PNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLL 646
           PNV T   +++   + G L++A  L   M   G  P+  TY L+
Sbjct: 486 PNVWTYTIMINGLCQQGLLAEASKLFGEMKRKGYSPNGCTYNLI 529



 Score =  137 bits (346), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 93/330 (28%), Positives = 147/330 (44%), Gaps = 39/330 (11%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           G   + +T   ++      ++ G    +L ++++ G QPN+ T+N LI        + E 
Sbjct: 98  GIPPNIYTLNILINSFCHLQRLGFAFSVLAKILKLGHQPNIATFNTLIRGLCVEGKIGEV 157

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
           L +F +M   G +P+ VTY TLI+   K G    A+ + + M+     PD   Y+ II+ 
Sbjct: 158 LHLFDKMIGEGFQPNVVTYGTLINGLCKVGSTSAAIRLLRSMEQGNCQPDVVVYTSIIDS 217

Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNA----- 529
           L K   +  A  LF EM++QG  P++ TYN +I        ++    L  +M N+     
Sbjct: 218 LCKDRQVTQAFNLFSEMIHQGISPSIFTYNSLIHALCNLCEWKHVTALLNEMVNSKIMPN 277

Query: 530 ------------------------------GFEPDKVTYSIVMEVLGHC--GYLDEAEAV 557
                                         G EP+ VTY+ +M+  GHC    +DEA  V
Sbjct: 278 VVIFSTVVDALCKEGKVMEAHDVVDMMIKRGVEPNVVTYNALMD--GHCLRSEMDEAVKV 335

Query: 558 FAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLR 617
           F  M  K + PD   Y  L++ + K   + KA   +E M +  L PN  T ++L+     
Sbjct: 336 FDTMVCKGFAPDVVSYSTLINGYCKIQRIEKAMYLFEEMCRKELIPNTVTYSTLMHGLCH 395

Query: 618 VGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
           VG+L DA  L   M+  G  P   +Y +LL
Sbjct: 396 VGRLQDAIALFHEMVTRGQIPDFVSYCILL 425



 Score =  132 bits (332), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 97/382 (25%), Positives = 163/382 (42%), Gaps = 73/382 (19%)

Query: 340 HTVALGF-FNWLRRQAGFKHDEH--TYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVV 396
           H   LGF F+ L +     H  +  T+ T++  L    + G +  L D+M+ +G QPNVV
Sbjct: 115 HLQRLGFAFSVLAKILKLGHQPNIATFNTLIRGLCVEGKIGEVLHLFDKMIGEGFQPNVV 174

Query: 397 TYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKM 456
           TY  LI+   +    + A+ + + M+   C+PD V Y ++ID   K   +  A +++ +M
Sbjct: 175 TYGTLINGLCKVGSTSAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTQAFNLFSEM 234

Query: 457 QAAGLSPDTFTY-----------------------------------SVIINCLGKAGHL 481
              G+SP  FTY                                   S +++ L K G +
Sbjct: 235 IHQGISPSIFTYNSLIHALCNLCEWKHVTALLNEMVNSKIMPNVVIFSTVVDALCKEGKV 294

Query: 482 QAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPD------- 534
             AH +   M+ +G  PN+VTYN ++           A+K++  M   GF PD       
Sbjct: 295 MEAHDVVDMMIKRGVEPNVVTYNALMDGHCLRSEMDEAVKVFDTMVCKGFAPDVVSYSTL 354

Query: 535 ----------------------------KVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNW 566
                                        VTYS +M  L H G L +A A+F EM  +  
Sbjct: 355 INGYCKIQRIEKAMYLFEEMCRKELIPNTVTYSTLMHGLCHVGRLQDAIALFHEMVTRGQ 414

Query: 567 VPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYH 626
           +PD   Y +L+D   K   + +A    +A+  + + P++     ++    R G+L  A  
Sbjct: 415 IPDFVSYCILLDYLCKNRRLDEAIALLKAIEGSNMDPDIQIYTIVIDGMCRAGELEAARD 474

Query: 627 LLQGMLNLGLKPSLQTYTLLLS 648
           L   + + GL P++ TYT++++
Sbjct: 475 LFSNLSSKGLHPNVWTYTIMIN 496



 Score =  124 bits (312), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 76/286 (26%), Positives = 134/286 (46%)

Query: 363 YTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQ 422
           +T ++  + + + +  +  L  QM   G  PN+ T N LI+S+     L  A  V  ++ 
Sbjct: 71  FTKLLISITKMKHYSTVLSLSHQMDSFGIPPNIYTLNILINSFCHLQRLGFAFSVLAKIL 130

Query: 423 VVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQ 482
            +G +P+  T+ TLI      G +   + ++ KM   G  P+  TY  +IN L K G   
Sbjct: 131 KLGHQPNIATFNTLIRGLCVEGKIGEVLHLFDKMIGEGFQPNVVTYGTLINGLCKVGSTS 190

Query: 483 AAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVM 542
           AA +L   M    C P++V Y  +I    K R    A  L+ +M + G  P   TY+ ++
Sbjct: 191 AAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTQAFNLFSEMIHQGISPSIFTYNSLI 250

Query: 543 EVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLR 602
             L +        A+  EM     +P+  ++  +VD   K G V +A +  + M++ G+ 
Sbjct: 251 HALCNLCEWKHVTALLNEMVNSKIMPNVVIFSTVVDALCKEGKVMEAHDVVDMMIKRGVE 310

Query: 603 PNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
           PNV T N+L+       ++ +A  +   M+  G  P + +Y+ L++
Sbjct: 311 PNVVTYNALMDGHCLRSEMDEAVKVFDTMVCKGFAPDVVSYSTLIN 356



 Score = 97.4 bits (241), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 64/241 (26%), Positives = 109/241 (45%), Gaps = 35/241 (14%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           GF  D  +Y+T++    + ++      L ++M R    PN VTY+ L+H       L +A
Sbjct: 343 GFAPDVVSYSTLINGYCKIQRIEKAMYLFEEMCRKELIPNTVTYSTLMHGLCHVGRLQDA 402

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAK-------------------------------- 442
           + +F +M   G  PD V+YC L+D   K                                
Sbjct: 403 IALFHEMVTRGQIPDFVSYCILLDYLCKNRRLDEAIALLKAIEGSNMDPDIQIYTIVIDG 462

Query: 443 ---AGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPN 499
              AG L+ A D++  + + GL P+ +TY+++IN L + G L  A +LF EM  +G  PN
Sbjct: 463 MCRAGELEAARDLFSNLSSKGLHPNVWTYTIMINGLCQQGLLAEASKLFGEMKRKGYSPN 522

Query: 500 LVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFA 559
             TYN++     +       ++L ++M   GF  D  T ++++E+L   G     + + +
Sbjct: 523 GCTYNLITRGFLRNNETLRGIQLLQEMLARGFSADVSTSTVLVEMLSDDGLDQSVKQILS 582

Query: 560 E 560
           E
Sbjct: 583 E 583



 Score = 95.5 bits (236), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 60/255 (23%), Positives = 120/255 (47%)

Query: 393 PNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDM 452
           P++  + +L+ S  +  + +  L +  QM   G  P+  T   LI+       L  A  +
Sbjct: 66  PSIADFTKLLISITKMKHYSTVLSLSHQMDSFGIPPNIYTLNILINSFCHLQRLGFAFSV 125

Query: 453 YKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAK 512
             K+   G  P+  T++ +I  L   G +     LF +M+ +G  PN+VTY  +I    K
Sbjct: 126 LAKILKLGHQPNIATFNTLIRGLCVEGKIGEVLHLFDKMIGEGFQPNVVTYGTLINGLCK 185

Query: 513 ARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPV 572
             +  +A++L R M+    +PD V Y+ +++ L     + +A  +F+EM  +   P    
Sbjct: 186 VGSTSAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTQAFNLFSEMIHQGISPSIFT 245

Query: 573 YGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGML 632
           Y  L+         +        M+ + + PNV   ++++ A  + G++ +A+ ++  M+
Sbjct: 246 YNSLIHALCNLCEWKHVTALLNEMVNSKIMPNVVIFSTVVDALCKEGKVMEAHDVVDMMI 305

Query: 633 NLGLKPSLQTYTLLL 647
             G++P++ TY  L+
Sbjct: 306 KRGVEPNVVTYNALM 320



 Score = 92.4 bits (228), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 61/247 (24%), Positives = 112/247 (45%), Gaps = 1/247 (0%)

Query: 409 NYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTY 468
           N L++AL  F +M  +   P    +  L+    K       + +  +M + G+ P+ +T 
Sbjct: 47  NTLDDALSSFNRMLHMHPPPSIADFTKLLISITKMKHYSTVLSLSHQMDSFGIPPNIYTL 106

Query: 469 SVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQN 528
           +++IN       L  A  +  +++  G  PN+ T+N +I            L L+  M  
Sbjct: 107 NILINSFCHLQRLGFAFSVLAKILKLGHQPNIATFNTLIRGLCVEGKIGEVLHLFDKMIG 166

Query: 529 AGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRK 588
            GF+P+ VTY  ++  L   G    A  +   M + N  PD  VY  ++D   K   V +
Sbjct: 167 EGFQPNVVTYGTLINGLCKVGSTSAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTQ 226

Query: 589 AWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTY-TLLL 647
           A+  +  M+  G+ P++ T NSL+ A   + +      LL  M+N  + P++  + T++ 
Sbjct: 227 AFNLFSEMIHQGISPSIFTYNSLIHALCNLCEWKHVTALLNEMVNSKIMPNVVIFSTVVD 286

Query: 648 SCCTEAR 654
           + C E +
Sbjct: 287 ALCKEGK 293



 Score = 69.3 bits (168), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 65/301 (21%), Positives = 120/301 (39%), Gaps = 35/301 (11%)

Query: 446 LDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNI 505
           LD A+  + +M      P    ++ ++  + K  H      L  +M + G  PN+ T NI
Sbjct: 49  LDDALSSFNRMLHMHPPPSIADFTKLLISITKMKHYSTVLSLSHQMDSFGIPPNIYTLNI 108

Query: 506 MIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKN 565
           +I      +    A  +   +   G +P+  T++ ++  L   G + E   +F +M  + 
Sbjct: 109 LINSFCHLQRLGFAFSVLAKILKLGHQPNIATFNTLIRGLCVEGKIGEVLHLFDKMIGEG 168

Query: 566 WVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAY 625
           + P+   YG L++   K G+   A     +M Q   +P+V    S++ +  +  Q++ A+
Sbjct: 169 FQPNVVTYGTLINGLCKVGSTSAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTQAF 228

Query: 626 HLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGFCHELMAVSGHPAHMFLLSMPSPGP 685
           +L   M++ G+ PS+ TY  L+               H L  +                 
Sbjct: 229 NLFSEMIHQGISPSIFTYNSLI---------------HALCNLCE--------------- 258

Query: 686 DGQNVRDHVGSFLEMMHSEDRESKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDA 745
                  HV + L  M +        +   VVD L K G   EA  V ++  ++ V P+ 
Sbjct: 259 -----WKHVTALLNEMVNSKIMPNVVIFSTVVDALCKEGKVMEAHDVVDMMIKRGVEPNV 313

Query: 746 V 746
           V
Sbjct: 314 V 314


>gi|222628664|gb|EEE60796.1| hypothetical protein OsJ_14385 [Oryza sativa Japonica Group]
          Length = 808

 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 102/340 (30%), Positives = 153/340 (45%), Gaps = 39/340 (11%)

Query: 354 AGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNE 413
           +G   D  TY+ ++  L +++      ++L+QMV  G +PN +TYN LIH Y  +   NE
Sbjct: 198 SGIAPDLFTYSLIIDGLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNE 257

Query: 414 ALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIIN 473
           ++ VFKQM   G  P      + I    K G  + A  ++  M   G  PD  +YS +++
Sbjct: 258 SVRVFKQMSSCGVIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLH 317

Query: 474 CLGKAGH--LQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF 531
               A    L   H +F  M+ +G  PN   +NI+I   A+      A+ ++ DMQN G 
Sbjct: 318 GYATATDSCLADVHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGM 377

Query: 532 EPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWE 591
            PD VT++ V+  L   G LD+A   F  M      P E VYG L+      G + KA E
Sbjct: 378 IPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKE 437

Query: 592 WY------------------------------------EAMLQAGLRPNVPTCNSLLSAF 615
                                                 + M+Q G RPNV T NSL+  +
Sbjct: 438 LISEMMNKDIPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGY 497

Query: 616 LRVGQLSDAYHLLQGMLNLGLKPSLQTY-TLLLSCCTEAR 654
             VG + +A+ LL  M ++G++P+   Y TL+   C   R
Sbjct: 498 CLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGR 537



 Score =  133 bits (334), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 89/366 (24%), Positives = 171/366 (46%), Gaps = 3/366 (0%)

Query: 382 LLDQMVRDGCQPNVVTYNRLIHSYGRA--NYLNEALDVFKQMQVVGCEPDRVTYCTLIDI 439
           + D MV  G +P++++Y+ ++H Y  A  + L +  ++F  M   G  P++  +  LI+ 
Sbjct: 296 IFDSMVLKGPKPDIISYSTMLHGYATATDSCLADVHNIFNLMLTKGIAPNKHVFNILINA 355

Query: 440 HAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPN 499
           +A+ G +D AM +++ MQ  G+ PDT T++ +I+ L + G L  A   F  MV+ G  P+
Sbjct: 356 YARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPS 415

Query: 500 LVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTY-SIVMEVLGHCGYLDEAEAVF 558
              Y  +I           A +L  +M N    P  V Y S ++  L   G + E + + 
Sbjct: 416 EAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIINNLCKEGRVAEGKDIM 475

Query: 559 AEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRV 618
             M +    P+   +  L++ +   GN+ +A+   +AM   G+ PN     +L+  + + 
Sbjct: 476 DMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKN 535

Query: 619 GQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGFCHELMAVSGHPAHMFLL 678
           G++ DA  + + ML+ G+KP+   Y+++L    +AR           M  SG    +   
Sbjct: 536 GRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAAKKMFHEMIESGTTVSIHTY 595

Query: 679 SMPSPGPDGQNVRDHVGSFLEMMHSEDRESKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQ 738
            +   G    N  D     LE + + + +      + V+  + K G ++EA  +++  + 
Sbjct: 596 GVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMFKVGRRQEAKELFDAIST 655

Query: 739 KNVYPD 744
             + P+
Sbjct: 656 YGLVPN 661



 Score =  117 bits (294), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 85/341 (24%), Positives = 158/341 (46%), Gaps = 30/341 (8%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINK---LLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           G   D+ +Y+ + G +    + G ++K   L  +M+  G  P ++  N +I    +   +
Sbjct: 130 GLGPDDFSYSLIYGFV----KDGEVDKAHCLFLEMMEQGVLPKILICNSIIKELCKMKEM 185

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
           ++A  + ++M   G  PD  TY  +ID   K+  +D A  + ++M  AG  P++ TY+ +
Sbjct: 186 DKAESIVQKMVDSGIAPDLFTYSLIIDGLCKSKAMDKAERVLEQMVEAGTRPNSITYNSL 245

Query: 472 INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF 531
           I+    +G    + ++F +M + G IP +   N  I    K      A  ++  M   G 
Sbjct: 246 IHGYSISGMWNESVRVFKQMSSCGVIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGP 305

Query: 532 EPDKVTYSIVMEVLGHCGY-------LDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAG 584
           +PD ++YS ++      GY       L +   +F  M  K   P++ V+ +L++ + + G
Sbjct: 306 KPDIISYSTMLH-----GYATATDSCLADVHNIFNLMLTKGIAPNKHVFNILINAYARCG 360

Query: 585 NVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYT 644
            + KA   +E M   G+ P+  T  +++S+  R+G+L DA H    M+++G+ PS   Y 
Sbjct: 361 MMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYG 420

Query: 645 LLL-SCCTEARSPYDMGFCHELMAVSGHPAHMFLLSMPSPG 684
            L+  CC             EL+      + M    +P PG
Sbjct: 421 CLIQGCCNHG----------ELVKAKELISEMMNKDIPPPG 451



 Score =  113 bits (283), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 83/298 (27%), Positives = 138/298 (46%), Gaps = 7/298 (2%)

Query: 355 GFKHDEHTYTTMVGILGRARQ--FGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
           G K D  +Y+TM+     A       ++ + + M+  G  PN   +N LI++Y R   ++
Sbjct: 304 GPKPDIISYSTMLHGYATATDSCLADVHNIFNLMLTKGIAPNKHVFNILINAYARCGMMD 363

Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
           +A+ +F+ MQ  G  PD VT+ T+I    + G LD A+  +  M   G+ P    Y  +I
Sbjct: 364 KAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLI 423

Query: 473 NCLGKAGHLQAAHQLFCEMVNQGCIPNLVTY-NIMIALQAKARNYQSALKLYRDMQNAGF 531
                 G L  A +L  EM+N+   P  V Y + +I    K         +   M   G 
Sbjct: 424 QGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQ 483

Query: 532 EPDKVTYSIVMEVLGHC--GYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKA 589
            P+ VT++ +ME  G+C  G ++EA A+   M      P+  +YG LVD + K G +  A
Sbjct: 484 RPNVVTFNSLME--GYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDA 541

Query: 590 WEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
              +  ML  G++P     + +L    +  + + A  +   M+  G   S+ TY ++L
Sbjct: 542 LTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAAKKMFHEMIESGTTVSIHTYGVVL 599



 Score =  109 bits (272), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 63/220 (28%), Positives = 111/220 (50%), Gaps = 1/220 (0%)

Query: 428 PDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQL 487
           P   TY  LID + +    D+ + +  ++   GL PD F+YS+I   + K G +  AH L
Sbjct: 98  PTIHTYNILIDCYRRVHRPDLGLAIVGRLLKNGLGPDDFSYSLIYGFV-KDGEVDKAHCL 156

Query: 488 FCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGH 547
           F EM+ QG +P ++  N +I    K +    A  + + M ++G  PD  TYS++++ L  
Sbjct: 157 FLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSLIIDGLCK 216

Query: 548 CGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPT 607
              +D+AE V  +M      P+   Y  L+  +  +G   ++   ++ M   G+ P V  
Sbjct: 217 SKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIPTVDN 276

Query: 608 CNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
           CNS + A  + G+ ++A  +   M+  G KP + +Y+ +L
Sbjct: 277 CNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTML 316



 Score =  105 bits (262), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 72/288 (25%), Positives = 141/288 (48%), Gaps = 4/288 (1%)

Query: 363 YTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQ 422
           +++++  L +  +      ++D MV+ G +PNVVT+N L+  Y     + EA  +   M 
Sbjct: 455 FSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMA 514

Query: 423 VVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQ 482
            +G EP+   Y TL+D + K G +D A+ +++ M   G+ P +  YS+I++ L +A    
Sbjct: 515 SIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTT 574

Query: 483 AAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVM 542
           AA ++F EM+  G   ++ TY +++    +      A  L   +     + D +T++IV+
Sbjct: 575 AAKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVI 634

Query: 543 EVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLR 602
             +   G   EA+ +F  +     VP+   Y +++    K  +  +A   + ++ ++G  
Sbjct: 635 SAMFKVGRRQEAKELFDAISTYGLVPNIQTYSMMITNLIKEESYEEADNLFISVEKSGHA 694

Query: 603 PNVPTCNSLLSAFLRVGQLSDA--YHLLQGMLNLGLKPSLQTYTLLLS 648
            +    N ++   L   +++ A  Y  + G  NL L+ S  T +LL S
Sbjct: 695 SDSRLLNHIVRMLLNKAEVAKASNYLSIIGENNLTLEAS--TISLLAS 740



 Score = 89.7 bits (221), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 56/245 (22%), Positives = 120/245 (48%)

Query: 384 DQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKA 443
           + M +D   P V  ++ +I++  +   + E  D+   M   G  P+ VT+ +L++ +   
Sbjct: 441 EMMNKDIPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLV 500

Query: 444 GFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTY 503
           G ++ A  +   M + G+ P+ + Y  +++   K G +  A  +F +M+++G  P  V Y
Sbjct: 501 GNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLY 560

Query: 504 NIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRR 563
           +I++    +AR   +A K++ +M  +G      TY +V+  L      DEA  +  ++  
Sbjct: 561 SIILHGLFQARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFA 620

Query: 564 KNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSD 623
            N   D   + +++    K G  ++A E ++A+   GL PN+ T + +++  ++     +
Sbjct: 621 MNVKFDIITFNIVISAMFKVGRRQEAKELFDAISTYGLVPNIQTYSMMITNLIKEESYEE 680

Query: 624 AYHLL 628
           A +L 
Sbjct: 681 ADNLF 685



 Score = 82.0 bits (201), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 59/244 (24%), Positives = 107/244 (43%)

Query: 382 LLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHA 441
           LLD M   G +PN   Y  L+  Y +   +++AL VF+ M   G +P  V Y  ++    
Sbjct: 509 LLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLF 568

Query: 442 KAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLV 501
           +A     A  M+ +M  +G +    TY V++  L +      A+ L  ++       +++
Sbjct: 569 QARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDII 628

Query: 502 TYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEM 561
           T+NI+I+   K    Q A +L+  +   G  P+  TYS+++  L      +EA+ +F  +
Sbjct: 629 TFNIVISAMFKVGRRQEAKELFDAISTYGLVPNIQTYSMMITNLIKEESYEEADNLFISV 688

Query: 562 RRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQL 621
            +     D  +   +V +      V KA  +   + +  L     T + L S F R G +
Sbjct: 689 EKSGHASDSRLLNHIVRMLLNKAEVAKASNYLSIIGENNLTLEASTISLLASLFSREGMI 748

Query: 622 SDAY 625
              +
Sbjct: 749 KGLF 752



 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 63/262 (24%), Positives = 106/262 (40%), Gaps = 18/262 (6%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           G K     Y+ ++  L +AR+  A  K+  +M+  G   ++ TY  ++    R N  +EA
Sbjct: 552 GVKPTSVLYSIILHGLFQARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEA 611

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
             + +++  +  + D +T+  +I    K G    A +++  +   GL P+  TYS++I  
Sbjct: 612 NMLLEKLFAMNVKFDIITFNIVISAMFKVGRRQEAKELFDAISTYGLVPNIQTYSMMITN 671

Query: 475 LGKAGHLQAAHQLFCEMVNQG------CIPNLVTYNIMIALQAKARNYQSALKLYRDMQN 528
           L K    + A  LF  +   G       + ++V   +  A  AKA NY S +       N
Sbjct: 672 LIKEESYEEADNLFISVEKSGHASDSRLLNHIVRMLLNKAEVAKASNYLSII----GENN 727

Query: 529 AGFEPDKVT-----YSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGK- 582
              E   ++     +S    + G  G          E+     V   P  G  V+L G  
Sbjct: 728 LTLEASTISLLASLFSREGMIKGLFGTAPAPAPALLELELSQTVSAPPKLG--VELGGAL 785

Query: 583 AGNVRKAWEWYEAMLQAGLRPN 604
             N  + W W  A  Q   RPN
Sbjct: 786 TQNELELWSWVYAAPQLHSRPN 807


>gi|388499386|gb|AFK37759.1| unknown [Lotus japonicus]
          Length = 500

 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 92/297 (30%), Positives = 149/297 (50%), Gaps = 2/297 (0%)

Query: 349 WLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRA 408
           W+  ++ FK D   Y  ++   G+   +        Q++   C PN  TY  LI +Y  +
Sbjct: 151 WILLRSSFKQDVICYNLLIDAFGQKFLYKEAESTYLQLLEARCIPNEDTYALLIKAYCLS 210

Query: 409 NYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTY 468
             L +A  VF +M+  G     V Y + I+   K G  + A +++ +M+  G  P T TY
Sbjct: 211 GLLEKAEAVFVEMKNYGLPSSAVVYNSYINGLMKGGNPNKAEEIFLRMKRDGCKPSTETY 270

Query: 469 SVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQN 528
           +++IN  GK G    A ++F EM++  C PN+ TY  ++   A+    + A +++  MQ 
Sbjct: 271 TMLINLYGKDGKSFMALKVFNEMLSHKCKPNICTYTALVNAFAREGLCEKAEEVFEQMQE 330

Query: 529 AGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRK 588
           AG EPD  +Y+ +ME     G+   A  +F+ M+     PD   Y +LVD +G+AG +  
Sbjct: 331 AGLEPDVYSYNALMEAYSRAGFPYGAAEIFSLMQHMGCEPDRASYNILVDAYGRAGFLND 390

Query: 589 AWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTL 645
           A   +E M + G+ P + +   LLSAF + G +S    +L  M   GLK  L T+ L
Sbjct: 391 AEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCEDILNQMCKSGLK--LDTFVL 445



 Score =  132 bits (332), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 77/263 (29%), Positives = 135/263 (51%)

Query: 386 MVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGF 445
           ++R   + +V+ YN LI ++G+     EA   + Q+    C P+  TY  LI  +  +G 
Sbjct: 153 LLRSSFKQDVICYNLLIDAFGQKFLYKEAESTYLQLLEARCIPNEDTYALLIKAYCLSGL 212

Query: 446 LDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNI 505
           L+ A  ++ +M+  GL      Y+  IN L K G+   A ++F  M   GC P+  TY +
Sbjct: 213 LEKAEAVFVEMKNYGLPSSAVVYNSYINGLMKGGNPNKAEEIFLRMKRDGCKPSTETYTM 272

Query: 506 MIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKN 565
           +I L  K      ALK++ +M +   +P+  TY+ ++      G  ++AE VF +M+   
Sbjct: 273 LINLYGKDGKSFMALKVFNEMLSHKCKPNICTYTALVNAFAREGLCEKAEEVFEQMQEAG 332

Query: 566 WVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAY 625
             PD   Y  L++ + +AG    A E +  M   G  P+  + N L+ A+ R G L+DA 
Sbjct: 333 LEPDVYSYNALMEAYSRAGFPYGAAEIFSLMQHMGCEPDRASYNILVDAYGRAGFLNDAE 392

Query: 626 HLLQGMLNLGLKPSLQTYTLLLS 648
            + + M  +G+ P+++++ +LLS
Sbjct: 393 AVFEDMKRVGITPTMKSHMVLLS 415



 Score =  125 bits (315), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 65/238 (27%), Positives = 127/238 (53%), Gaps = 2/238 (0%)

Query: 352 RQAGFKHDEHTYTTMVGILGR-ARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANY 410
           ++ G K    TYT ++ + G+  + F A+ K+ ++M+   C+PN+ TY  L++++ R   
Sbjct: 259 KRDGCKPSTETYTMLINLYGKDGKSFMAL-KVFNEMLSHKCKPNICTYTALVNAFAREGL 317

Query: 411 LNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSV 470
             +A +VF+QMQ  G EPD  +Y  L++ +++AGF   A +++  MQ  G  PD  +Y++
Sbjct: 318 CEKAEEVFEQMQEAGLEPDVYSYNALMEAYSRAGFPYGAAEIFSLMQHMGCEPDRASYNI 377

Query: 471 IINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAG 530
           +++  G+AG L  A  +F +M   G  P + ++ ++++  +K  N      +   M  +G
Sbjct: 378 LVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCEDILNQMCKSG 437

Query: 531 FEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRK 588
            + D    + ++ + G  G   + E V   M   +   D   Y +L++ +G+AG + K
Sbjct: 438 LKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINRYGQAGFIDK 495



 Score =  125 bits (314), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 65/235 (27%), Positives = 120/235 (51%)

Query: 385 QMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAG 444
           +M RDGC+P+  TY  LI+ YG+      AL VF +M    C+P+  TY  L++  A+ G
Sbjct: 257 RMKRDGCKPSTETYTMLINLYGKDGKSFMALKVFNEMLSHKCKPNICTYTALVNAFAREG 316

Query: 445 FLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYN 504
             + A +++++MQ AGL PD ++Y+ ++    +AG    A ++F  M + GC P+  +YN
Sbjct: 317 LCEKAEEVFEQMQEAGLEPDVYSYNALMEAYSRAGFPYGAAEIFSLMQHMGCEPDRASYN 376

Query: 505 IMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRK 564
           I++    +A     A  ++ DM+  G  P   ++ +++      G + + E +  +M + 
Sbjct: 377 ILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCEDILNQMCKS 436

Query: 565 NWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVG 619
               D  V   +++L+G+ G   K  E    M       ++ T N L++ + + G
Sbjct: 437 GLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINRYGQAG 491



 Score =  115 bits (289), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 57/197 (28%), Positives = 104/197 (52%)

Query: 362 TYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQM 421
           TYT +V    R        ++ +QM   G +P+V +YN L+ +Y RA +   A ++F  M
Sbjct: 304 TYTALVNAFAREGLCEKAEEVFEQMQEAGLEPDVYSYNALMEAYSRAGFPYGAAEIFSLM 363

Query: 422 QVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHL 481
           Q +GCEPDR +Y  L+D + +AGFL+ A  +++ M+  G++P   ++ V+++   K G++
Sbjct: 364 QHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNV 423

Query: 482 QAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIV 541
                +  +M   G   +    N M+ L  +   +    ++   M+N   E D  TY+I+
Sbjct: 424 SKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNIL 483

Query: 542 MEVLGHCGYLDEAEAVF 558
           +   G  G++D+ E +F
Sbjct: 484 INRYGQAGFIDKMEGLF 500



 Score = 94.7 bits (234), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 55/208 (26%), Positives = 98/208 (47%)

Query: 459 AGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQS 518
           +    D   Y+++I+  G+    + A   + +++   CIPN  TY ++I     +   + 
Sbjct: 156 SSFKQDVICYNLLIDAFGQKFLYKEAESTYLQLLEARCIPNEDTYALLIKAYCLSGLLEK 215

Query: 519 ALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVD 578
           A  ++ +M+N G     V Y+  +  L   G  ++AE +F  M+R    P    Y +L++
Sbjct: 216 AEAVFVEMKNYGLPSSAVVYNSYINGLMKGGNPNKAEEIFLRMKRDGCKPSTETYTMLIN 275

Query: 579 LWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKP 638
           L+GK G    A + +  ML    +PN+ T  +L++AF R G    A  + + M   GL+P
Sbjct: 276 LYGKDGKSFMALKVFNEMLSHKCKPNICTYTALVNAFAREGLCEKAEEVFEQMQEAGLEP 335

Query: 639 SLQTYTLLLSCCTEARSPYDMGFCHELM 666
            + +Y  L+   + A  PY       LM
Sbjct: 336 DVYSYNALMEAYSRAGFPYGAAEIFSLM 363



 Score = 70.1 bits (170), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 49/195 (25%), Positives = 83/195 (42%), Gaps = 49/195 (25%)

Query: 329 QANQVLKQLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVR 388
           +A +V +Q+Q              +AG + D ++Y  ++    RA       ++   M  
Sbjct: 320 KAEEVFEQMQ--------------EAGLEPDVYSYNALMEAYSRAGFPYGAAEIFSLMQH 365

Query: 389 DGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDV 448
            GC+P+  +YN L+ +YGRA +LN+A  VF+ M+ VG  P   ++  L+   +K G +  
Sbjct: 366 MGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSK 425

Query: 449 AMDMYKKMQAAGLSPDTF-----------------------------------TYSVIIN 473
             D+  +M  +GL  DTF                                   TY+++IN
Sbjct: 426 CEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILIN 485

Query: 474 CLGKAGHLQAAHQLF 488
             G+AG +     LF
Sbjct: 486 RYGQAGFIDKMEGLF 500



 Score = 39.7 bits (91), Expect = 6.6,   Method: Compositional matrix adjust.
 Identities = 46/187 (24%), Positives = 79/187 (42%), Gaps = 4/187 (2%)

Query: 561 MRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQ 620
           + R ++  D   Y LL+D +G+    ++A   Y  +L+A   PN  T   L+ A+   G 
Sbjct: 153 LLRSSFKQDVICYNLLIDAFGQKFLYKEAESTYLQLLEARCIPNEDTYALLIKAYCLSGL 212

Query: 621 LSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGFCHELMAVSG-HPA-HMFLL 678
           L  A  +   M N GL  S   Y   ++   +  +P         M   G  P+   + +
Sbjct: 213 LEKAEAVFVEMKNYGLPSSAVVYNSYINGLMKGGNPNKAEEIFLRMKRDGCKPSTETYTM 272

Query: 679 SMPSPGPDGQNVRDHVGSFLEMMHSEDRESKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQ 738
            +   G DG++    +  F EM+ S   +       A+V+   + GL E+A  V+E   +
Sbjct: 273 LINLYGKDGKSFM-ALKVFNEML-SHKCKPNICTYTALVNAFAREGLCEKAEEVFEQMQE 330

Query: 739 KNVYPDA 745
             + PD 
Sbjct: 331 AGLEPDV 337


>gi|326490085|dbj|BAJ94116.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 641

 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 82/293 (27%), Positives = 151/293 (51%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           G K +   Y T++  L  A ++     LL +M ++ C  + VT+N L+  + +   ++  
Sbjct: 313 GLKPNVVCYNTVLKGLCSAERWEEAEDLLAEMFQEDCPLDDVTFNILVDFFCQNGLVDRV 372

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
           +++ +QM   GC PD +TY T+I+   K G +D A+ + K M A G  P+T +Y++++  
Sbjct: 373 IELLEQMLEHGCIPDVITYTTVINGFCKEGLVDEAVMLLKNMSACGCKPNTISYTIVLKG 432

Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPD 534
           L +A     A +L   M+ QGC+PN VT+N +I    K    + A++L + M   G  PD
Sbjct: 433 LCRAERWVDAQELISHMIQQGCLPNPVTFNTLINFMCKKGLVEQAIELLKQMLVNGCSPD 492

Query: 535 KVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYE 594
            ++YS V++ LG  G  +EA  +   M  K   P+  +Y  +     + G   K  + ++
Sbjct: 493 LISYSTVIDGLGKAGKTEEALELLNVMINKGITPNTIIYSSMASALSREGRTDKIIQMFD 552

Query: 595 AMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
           ++  A +R +    N+++S+  +  +   A      M++ G  P+  TYT+L+
Sbjct: 553 SIQDATVRSDAALYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTILI 605



 Score =  139 bits (351), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 93/336 (27%), Positives = 154/336 (45%), Gaps = 2/336 (0%)

Query: 314 AEEALGNTNYSMDAYQANQVLKQLQDHTVALGFFNWLRRQAGF--KHDEHTYTTMVGILG 371
           A + L     ++D+   N V+  + +          LR+   F  + D  +Y  ++  L 
Sbjct: 165 ALQVLHAKGCTLDSGNCNLVVSAICEQGCVDEGVELLRKLPSFGCEPDIVSYNAVLKGLC 224

Query: 372 RARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRV 431
            A+++  + +L+ +MVR GC PNV T+N LI    R     +  +   QM   GC PD  
Sbjct: 225 MAKRWDDVEELMVEMVRVGCPPNVATFNTLIAYLCRNGLFEQVHEALSQMPEHGCTPDLR 284

Query: 432 TYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEM 491
            Y T+ID   K G  +VA D+  +M + GL P+   Y+ ++  L  A   + A  L  EM
Sbjct: 285 MYATIIDGICKDGHHEVANDILSRMPSYGLKPNVVCYNTVLKGLCSAERWEEAEDLLAEM 344

Query: 492 VNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYL 551
             + C  + VT+NI++    +       ++L   M   G  PD +TY+ V+      G +
Sbjct: 345 FQEDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCIPDVITYTTVINGFCKEGLV 404

Query: 552 DEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSL 611
           DEA  +   M      P+   Y +++    +A     A E    M+Q G  PN  T N+L
Sbjct: 405 DEAVMLLKNMSACGCKPNTISYTIVLKGLCRAERWVDAQELISHMIQQGCLPNPVTFNTL 464

Query: 612 LSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
           ++   + G +  A  LL+ ML  G  P L +Y+ ++
Sbjct: 465 INFMCKKGLVEQAIELLKQMLVNGCSPDLISYSTVI 500



 Score =  122 bits (306), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 97/394 (24%), Positives = 177/394 (44%), Gaps = 20/394 (5%)

Query: 372 RARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRV 431
           R   F +  + L  +   GC  +    N ++ +      ++E +++ +++   GCEPD V
Sbjct: 155 RGGGFRSAVRALQVLHAKGCTLDSGNCNLVVSAICEQGCVDEGVELLRKLPSFGCEPDIV 214

Query: 432 TYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEM 491
           +Y  ++     A   D   ++  +M   G  P+  T++ +I  L + G  +  H+   +M
Sbjct: 215 SYNAVLKGLCMAKRWDDVEELMVEMVRVGCPPNVATFNTLIAYLCRNGLFEQVHEALSQM 274

Query: 492 VNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYL 551
              GC P+L  Y  +I    K  +++ A  +   M + G +P+ V Y+ V++ L      
Sbjct: 275 PEHGCTPDLRMYATIIDGICKDGHHEVANDILSRMPSYGLKPNVVCYNTVLKGLCSAERW 334

Query: 552 DEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSL 611
           +EAE + AEM +++   D+  + +LVD + + G V +  E  E ML+ G  P+V T  ++
Sbjct: 335 EEAEDLLAEMFQEDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCIPDVITYTTV 394

Query: 612 LSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGFCHELMAVSGH 671
           ++ F + G + +A  LL+ M   G KP+  +YT++L     A    D     EL+     
Sbjct: 395 INGFCKEGLVDEAVMLLKNMSACGCKPNTISYTIVLKGLCRAERWVDA---QELI----- 446

Query: 672 PAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRESKRGLVDA----------VVDFLH 721
            +HM       P P   N   +      ++       K+ LV+           V+D L 
Sbjct: 447 -SHMIQQGC-LPNPVTFNTLINFMCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLG 504

Query: 722 KSGLKEEAGSVWEVAAQKNVYPDAVKEKGMSYWL 755
           K+G  EEA  +  V   K + P+ +    M+  L
Sbjct: 505 KAGKTEEALELLNVMINKGITPNTIIYSSMASAL 538



 Score =  120 bits (301), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 70/270 (25%), Positives = 132/270 (48%)

Query: 359 DEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVF 418
           D+ T+  +V    +      + +LL+QM+  GC P+V+TY  +I+ + +   ++EA+ + 
Sbjct: 352 DDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCIPDVITYTTVINGFCKEGLVDEAVMLL 411

Query: 419 KQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKA 478
           K M   GC+P+ ++Y  ++    +A     A ++   M   G  P+  T++ +IN + K 
Sbjct: 412 KNMSACGCKPNTISYTIVLKGLCRAERWVDAQELISHMIQQGCLPNPVTFNTLINFMCKK 471

Query: 479 GHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTY 538
           G ++ A +L  +M+  GC P+L++Y+ +I    KA   + AL+L   M N G  P+ + Y
Sbjct: 472 GLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMINKGITPNTIIY 531

Query: 539 SIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQ 598
           S +   L   G  D+   +F  ++      D  +Y  ++    K     +A +++  M+ 
Sbjct: 532 SSMASALSREGRTDKIIQMFDSIQDATVRSDAALYNAVISSLCKRWETDRAIDFFAYMVS 591

Query: 599 AGLRPNVPTCNSLLSAFLRVGQLSDAYHLL 628
            G  PN  T   L+      G + +A  LL
Sbjct: 592 NGCMPNESTYTILIRGLASEGLVREAQDLL 621



 Score =  108 bits (271), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 62/214 (28%), Positives = 113/214 (52%)

Query: 354 AGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNE 413
            G K +  +YT ++  L RA ++    +L+  M++ GC PN VT+N LI+   +   + +
Sbjct: 417 CGCKPNTISYTIVLKGLCRAERWVDAQELISHMIQQGCLPNPVTFNTLINFMCKKGLVEQ 476

Query: 414 ALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIIN 473
           A+++ KQM V GC PD ++Y T+ID   KAG  + A+++   M   G++P+T  YS + +
Sbjct: 477 AIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMINKGITPNTIIYSSMAS 536

Query: 474 CLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEP 533
            L + G      Q+F  + +     +   YN +I+   K      A+  +  M + G  P
Sbjct: 537 ALSREGRTDKIIQMFDSIQDATVRSDAALYNAVISSLCKRWETDRAIDFFAYMVSNGCMP 596

Query: 534 DKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWV 567
           ++ TY+I++  L   G + EA+ + +E+  +  V
Sbjct: 597 NESTYTILIRGLASEGLVREAQDLLSELCSRRAV 630



 Score = 80.5 bits (197), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 52/240 (21%), Positives = 107/240 (44%)

Query: 393 PNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDM 452
           PN  TY  ++ S      + +AL V  +M + GC         +++   + G    A+  
Sbjct: 106 PNAYTYFPIVRSLCARGLIADALTVLDEMPLRGCAATPPMCHVILEAACRGGGFRSAVRA 165

Query: 453 YKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAK 512
            + + A G + D+   +++++ + + G +    +L  ++ + GC P++V+YN ++     
Sbjct: 166 LQVLHAKGCTLDSGNCNLVVSAICEQGCVDEGVELLRKLPSFGCEPDIVSYNAVLKGLCM 225

Query: 513 ARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPV 572
           A+ +    +L  +M   G  P+  T++ ++  L   G  ++     ++M      PD  +
Sbjct: 226 AKRWDDVEELMVEMVRVGCPPNVATFNTLIAYLCRNGLFEQVHEALSQMPEHGCTPDLRM 285

Query: 573 YGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGML 632
           Y  ++D   K G+   A +    M   GL+PNV   N++L       +  +A  LL  M 
Sbjct: 286 YATIIDGICKDGHHEVANDILSRMPSYGLKPNVVCYNTVLKGLCSAERWEEAEDLLAEMF 345



 Score = 69.7 bits (169), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 94/432 (21%), Positives = 164/432 (37%), Gaps = 28/432 (6%)

Query: 395 VVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYK 454
           VV YN +I  Y RA  +  A  +   + V    P+  TY  ++      G +  A+ +  
Sbjct: 76  VVAYNAMIAGYCRAGQVAAARRLAAAVPV---PPNAYTYFPIVRSLCARGLIADALTVLD 132

Query: 455 KMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKAR 514
           +M   G +       VI+    + G  ++A +    +  +GC  +    N++++   +  
Sbjct: 133 EMPLRGCAATPPMCHVILEAACRGGGFRSAVRALQVLHAKGCTLDSGNCNLVVSAICEQG 192

Query: 515 NYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYG 574
                ++L R + + G EPD V+Y+ V++ L      D+ E +  EM R    P+   + 
Sbjct: 193 CVDEGVELLRKLPSFGCEPDIVSYNAVLKGLCMAKRWDDVEELMVEMVRVGCPPNVATFN 252

Query: 575 LLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNL 634
            L+    + G   +  E    M + G  P++    +++    + G    A  +L  M + 
Sbjct: 253 TLIAYLCRNGLFEQVHEALSQMPEHGCTPDLRMYATIIDGICKDGHHEVANDILSRMPSY 312

Query: 635 GLKPSLQTY-TLLLSCCTEARSPYDMGFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDH 693
           GLKP++  Y T+L   C+  R         E+      P      ++         + D 
Sbjct: 313 GLKPNVVCYNTVLKGLCSAERWEEAEDLLAEMFQ-EDCPLDDVTFNILVDFFCQNGLVDR 371

Query: 694 VGSFLEMMHSEDRESKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAVKEKGMSY 753
           V   LE M              V++   K GL +EA     V   KN+     K   +SY
Sbjct: 372 VIELLEQMLEHGCIPDVITYTTVINGFCKEGLVDEA-----VMLLKNMSACGCKPNTISY 426

Query: 754 WLINLHVMSDGTAVIALSRTLAWFRKQMLIS-----GVGPSRIDIVTGWGRRSRVTGTSL 808
            ++          +  L R   W   Q LIS     G  P+ +   T      +     L
Sbjct: 427 TIV----------LKGLCRAERWVDAQELISHMIQQGCLPNPVTFNTLINFMCK---KGL 473

Query: 809 VRQAVQELLHMF 820
           V QA++ L  M 
Sbjct: 474 VEQAIELLKQML 485


>gi|225451352|ref|XP_002274891.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 577

 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 89/285 (31%), Positives = 154/285 (54%)

Query: 363 YTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQ 422
           ++T+V  L +  +    + ++D M++ G +PNVVTYN L+  +   + ++EA+ VF  M 
Sbjct: 272 FSTVVDALCKEGKVMEAHDVVDMMIKRGVEPNVVTYNALMDGHCLRSEMDEAVKVFDTMV 331

Query: 423 VVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQ 482
             G  PD V+Y TLI+ + K   ++ AM ++++M    L P+T TYS +++ L   G LQ
Sbjct: 332 CKGFAPDVVSYSTLINGYCKIQRIEKAMYLFEEMCRKELIPNTVTYSTLMHGLCHVGRLQ 391

Query: 483 AAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVM 542
            A  LF EMV +G IP+ V+Y I++    K R    A+ L + ++ +  +PD   Y+IV+
Sbjct: 392 DAIALFHEMVTRGQIPDFVSYCILLDYLCKNRRLDEAIALLKAIEGSNMDPDIQIYTIVI 451

Query: 543 EVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLR 602
           + +   G L+ A  +F+ +  K   P+   Y ++++   + G + +A + +  M + G  
Sbjct: 452 DGMCRAGELEAARDLFSNLSSKGLHPNVWTYTIMINGLCQQGLLAEASKLFGEMKRKGYS 511

Query: 603 PNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
           PN  T N +   FLR  +      LLQ ML  G    + T T+L+
Sbjct: 512 PNGCTYNLITRGFLRNNETLRGIQLLQEMLARGFSADVSTSTVLV 556



 Score =  145 bits (367), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 99/344 (28%), Positives = 163/344 (47%), Gaps = 8/344 (2%)

Query: 303 RILRQWKWGPLAEEALGNTNYSMDAYQANQVLKQLQDHTVALGFFNWLRRQAGFKHDEHT 362
           R+LR  + G    + +  T+      +  QV       T A   F+ +  Q G      T
Sbjct: 185 RLLRSMEQGNCQPDVVVYTSIIDSLCKDRQV-------TQAFNLFSEMIHQ-GISPSIFT 236

Query: 363 YTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQ 422
           Y +++  L    ++  +  LL++MV     PNVV ++ ++ +  +   + EA DV   M 
Sbjct: 237 YNSLIHALCNLCEWKHVTALLNEMVNSKIMPNVVIFSTVVDALCKEGKVMEAHDVVDMMI 296

Query: 423 VVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQ 482
             G EP+ VTY  L+D H     +D A+ ++  M   G +PD  +YS +IN   K   ++
Sbjct: 297 KRGVEPNVVTYNALMDGHCLRSEMDEAVKVFDTMVCKGFAPDVVSYSTLINGYCKIQRIE 356

Query: 483 AAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVM 542
            A  LF EM  +  IPN VTY+ ++         Q A+ L+ +M   G  PD V+Y I++
Sbjct: 357 KAMYLFEEMCRKELIPNTVTYSTLMHGLCHVGRLQDAIALFHEMVTRGQIPDFVSYCILL 416

Query: 543 EVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLR 602
           + L     LDEA A+   +   N  PD  +Y +++D   +AG +  A + +  +   GL 
Sbjct: 417 DYLCKNRRLDEAIALLKAIEGSNMDPDIQIYTIVIDGMCRAGELEAARDLFSNLSSKGLH 476

Query: 603 PNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLL 646
           PNV T   +++   + G L++A  L   M   G  P+  TY L+
Sbjct: 477 PNVWTYTIMINGLCQQGLLAEASKLFGEMKRKGYSPNGCTYNLI 520



 Score =  137 bits (346), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 93/330 (28%), Positives = 147/330 (44%), Gaps = 39/330 (11%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           G   + +T   ++      ++ G    +L ++++ G QPN+ T+N LI        + E 
Sbjct: 89  GIPPNIYTLNILINSFCHLQRLGFAFSVLAKILKLGHQPNIATFNTLIRGLCVEGKIGEV 148

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
           L +F +M   G +P+ VTY TLI+   K G    A+ + + M+     PD   Y+ II+ 
Sbjct: 149 LHLFDKMIGEGFQPNVVTYGTLINGLCKVGSTSAAIRLLRSMEQGNCQPDVVVYTSIIDS 208

Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNA----- 529
           L K   +  A  LF EM++QG  P++ TYN +I        ++    L  +M N+     
Sbjct: 209 LCKDRQVTQAFNLFSEMIHQGISPSIFTYNSLIHALCNLCEWKHVTALLNEMVNSKIMPN 268

Query: 530 ------------------------------GFEPDKVTYSIVMEVLGHC--GYLDEAEAV 557
                                         G EP+ VTY+ +M+  GHC    +DEA  V
Sbjct: 269 VVIFSTVVDALCKEGKVMEAHDVVDMMIKRGVEPNVVTYNALMD--GHCLRSEMDEAVKV 326

Query: 558 FAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLR 617
           F  M  K + PD   Y  L++ + K   + KA   +E M +  L PN  T ++L+     
Sbjct: 327 FDTMVCKGFAPDVVSYSTLINGYCKIQRIEKAMYLFEEMCRKELIPNTVTYSTLMHGLCH 386

Query: 618 VGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
           VG+L DA  L   M+  G  P   +Y +LL
Sbjct: 387 VGRLQDAIALFHEMVTRGQIPDFVSYCILL 416



 Score =  132 bits (332), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 97/382 (25%), Positives = 163/382 (42%), Gaps = 73/382 (19%)

Query: 340 HTVALGF-FNWLRRQAGFKHDEH--TYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVV 396
           H   LGF F+ L +     H  +  T+ T++  L    + G +  L D+M+ +G QPNVV
Sbjct: 106 HLQRLGFAFSVLAKILKLGHQPNIATFNTLIRGLCVEGKIGEVLHLFDKMIGEGFQPNVV 165

Query: 397 TYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKM 456
           TY  LI+   +    + A+ + + M+   C+PD V Y ++ID   K   +  A +++ +M
Sbjct: 166 TYGTLINGLCKVGSTSAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTQAFNLFSEM 225

Query: 457 QAAGLSPDTFTY-----------------------------------SVIINCLGKAGHL 481
              G+SP  FTY                                   S +++ L K G +
Sbjct: 226 IHQGISPSIFTYNSLIHALCNLCEWKHVTALLNEMVNSKIMPNVVIFSTVVDALCKEGKV 285

Query: 482 QAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPD------- 534
             AH +   M+ +G  PN+VTYN ++           A+K++  M   GF PD       
Sbjct: 286 MEAHDVVDMMIKRGVEPNVVTYNALMDGHCLRSEMDEAVKVFDTMVCKGFAPDVVSYSTL 345

Query: 535 ----------------------------KVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNW 566
                                        VTYS +M  L H G L +A A+F EM  +  
Sbjct: 346 INGYCKIQRIEKAMYLFEEMCRKELIPNTVTYSTLMHGLCHVGRLQDAIALFHEMVTRGQ 405

Query: 567 VPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYH 626
           +PD   Y +L+D   K   + +A    +A+  + + P++     ++    R G+L  A  
Sbjct: 406 IPDFVSYCILLDYLCKNRRLDEAIALLKAIEGSNMDPDIQIYTIVIDGMCRAGELEAARD 465

Query: 627 LLQGMLNLGLKPSLQTYTLLLS 648
           L   + + GL P++ TYT++++
Sbjct: 466 LFSNLSSKGLHPNVWTYTIMIN 487



 Score =  124 bits (312), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 76/286 (26%), Positives = 134/286 (46%)

Query: 363 YTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQ 422
           +T ++  + + + +  +  L  QM   G  PN+ T N LI+S+     L  A  V  ++ 
Sbjct: 62  FTKLLISITKMKHYSTVLSLSHQMDSFGIPPNIYTLNILINSFCHLQRLGFAFSVLAKIL 121

Query: 423 VVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQ 482
            +G +P+  T+ TLI      G +   + ++ KM   G  P+  TY  +IN L K G   
Sbjct: 122 KLGHQPNIATFNTLIRGLCVEGKIGEVLHLFDKMIGEGFQPNVVTYGTLINGLCKVGSTS 181

Query: 483 AAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVM 542
           AA +L   M    C P++V Y  +I    K R    A  L+ +M + G  P   TY+ ++
Sbjct: 182 AAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTQAFNLFSEMIHQGISPSIFTYNSLI 241

Query: 543 EVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLR 602
             L +        A+  EM     +P+  ++  +VD   K G V +A +  + M++ G+ 
Sbjct: 242 HALCNLCEWKHVTALLNEMVNSKIMPNVVIFSTVVDALCKEGKVMEAHDVVDMMIKRGVE 301

Query: 603 PNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
           PNV T N+L+       ++ +A  +   M+  G  P + +Y+ L++
Sbjct: 302 PNVVTYNALMDGHCLRSEMDEAVKVFDTMVCKGFAPDVVSYSTLIN 347



 Score = 97.4 bits (241), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 64/241 (26%), Positives = 109/241 (45%), Gaps = 35/241 (14%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           GF  D  +Y+T++    + ++      L ++M R    PN VTY+ L+H       L +A
Sbjct: 334 GFAPDVVSYSTLINGYCKIQRIEKAMYLFEEMCRKELIPNTVTYSTLMHGLCHVGRLQDA 393

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAK-------------------------------- 442
           + +F +M   G  PD V+YC L+D   K                                
Sbjct: 394 IALFHEMVTRGQIPDFVSYCILLDYLCKNRRLDEAIALLKAIEGSNMDPDIQIYTIVIDG 453

Query: 443 ---AGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPN 499
              AG L+ A D++  + + GL P+ +TY+++IN L + G L  A +LF EM  +G  PN
Sbjct: 454 MCRAGELEAARDLFSNLSSKGLHPNVWTYTIMINGLCQQGLLAEASKLFGEMKRKGYSPN 513

Query: 500 LVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFA 559
             TYN++     +       ++L ++M   GF  D  T ++++E+L   G     + + +
Sbjct: 514 GCTYNLITRGFLRNNETLRGIQLLQEMLARGFSADVSTSTVLVEMLSDDGLDQSVKQILS 573

Query: 560 E 560
           E
Sbjct: 574 E 574



 Score = 95.1 bits (235), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 60/255 (23%), Positives = 120/255 (47%)

Query: 393 PNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDM 452
           P++  + +L+ S  +  + +  L +  QM   G  P+  T   LI+       L  A  +
Sbjct: 57  PSIADFTKLLISITKMKHYSTVLSLSHQMDSFGIPPNIYTLNILINSFCHLQRLGFAFSV 116

Query: 453 YKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAK 512
             K+   G  P+  T++ +I  L   G +     LF +M+ +G  PN+VTY  +I    K
Sbjct: 117 LAKILKLGHQPNIATFNTLIRGLCVEGKIGEVLHLFDKMIGEGFQPNVVTYGTLINGLCK 176

Query: 513 ARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPV 572
             +  +A++L R M+    +PD V Y+ +++ L     + +A  +F+EM  +   P    
Sbjct: 177 VGSTSAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTQAFNLFSEMIHQGISPSIFT 236

Query: 573 YGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGML 632
           Y  L+         +        M+ + + PNV   ++++ A  + G++ +A+ ++  M+
Sbjct: 237 YNSLIHALCNLCEWKHVTALLNEMVNSKIMPNVVIFSTVVDALCKEGKVMEAHDVVDMMI 296

Query: 633 NLGLKPSLQTYTLLL 647
             G++P++ TY  L+
Sbjct: 297 KRGVEPNVVTYNALM 311



 Score = 92.4 bits (228), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 61/247 (24%), Positives = 112/247 (45%), Gaps = 1/247 (0%)

Query: 409 NYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTY 468
           N L++AL  F +M  +   P    +  L+    K       + +  +M + G+ P+ +T 
Sbjct: 38  NTLDDALSSFNRMLHMHPPPSIADFTKLLISITKMKHYSTVLSLSHQMDSFGIPPNIYTL 97

Query: 469 SVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQN 528
           +++IN       L  A  +  +++  G  PN+ T+N +I            L L+  M  
Sbjct: 98  NILINSFCHLQRLGFAFSVLAKILKLGHQPNIATFNTLIRGLCVEGKIGEVLHLFDKMIG 157

Query: 529 AGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRK 588
            GF+P+ VTY  ++  L   G    A  +   M + N  PD  VY  ++D   K   V +
Sbjct: 158 EGFQPNVVTYGTLINGLCKVGSTSAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTQ 217

Query: 589 AWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTY-TLLL 647
           A+  +  M+  G+ P++ T NSL+ A   + +      LL  M+N  + P++  + T++ 
Sbjct: 218 AFNLFSEMIHQGISPSIFTYNSLIHALCNLCEWKHVTALLNEMVNSKIMPNVVIFSTVVD 277

Query: 648 SCCTEAR 654
           + C E +
Sbjct: 278 ALCKEGK 284



 Score = 69.3 bits (168), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 65/301 (21%), Positives = 120/301 (39%), Gaps = 35/301 (11%)

Query: 446 LDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNI 505
           LD A+  + +M      P    ++ ++  + K  H      L  +M + G  PN+ T NI
Sbjct: 40  LDDALSSFNRMLHMHPPPSIADFTKLLISITKMKHYSTVLSLSHQMDSFGIPPNIYTLNI 99

Query: 506 MIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKN 565
           +I      +    A  +   +   G +P+  T++ ++  L   G + E   +F +M  + 
Sbjct: 100 LINSFCHLQRLGFAFSVLAKILKLGHQPNIATFNTLIRGLCVEGKIGEVLHLFDKMIGEG 159

Query: 566 WVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAY 625
           + P+   YG L++   K G+   A     +M Q   +P+V    S++ +  +  Q++ A+
Sbjct: 160 FQPNVVTYGTLINGLCKVGSTSAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTQAF 219

Query: 626 HLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGFCHELMAVSGHPAHMFLLSMPSPGP 685
           +L   M++ G+ PS+ TY  L+               H L  +                 
Sbjct: 220 NLFSEMIHQGISPSIFTYNSLI---------------HALCNLCE--------------- 249

Query: 686 DGQNVRDHVGSFLEMMHSEDRESKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDA 745
                  HV + L  M +        +   VVD L K G   EA  V ++  ++ V P+ 
Sbjct: 250 -----WKHVTALLNEMVNSKIMPNVVIFSTVVDALCKEGKVMEAHDVVDMMIKRGVEPNV 304

Query: 746 V 746
           V
Sbjct: 305 V 305


>gi|326495542|dbj|BAJ85867.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 706

 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 117/500 (23%), Positives = 218/500 (43%), Gaps = 17/500 (3%)

Query: 354 AGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQ--PNVVTYNRLIHSYGRANYL 411
           +G   D  TY+T++    R RQF    +  ++M   G    P+ VTY+ ++  Y +    
Sbjct: 204 SGVPLDNITYSTLITAARRCRQFAKAVEWFERMYSPGSAVLPDEVTYSAVLDVYAQLRMK 263

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
            E L +F + +  G +PD V +  L  +  +AG  D    ++K+M+  G  P+ F Y+ +
Sbjct: 264 EEVLALFDRARGSGWKPDHVAFAVLAKMFGEAGDYDGIQFVFKEMREVGTKPNIFVYNAL 323

Query: 472 INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF 531
           +  LGK G    A  LF EM  +G  PN  T   +  +  +AR  + AL+L+  M+    
Sbjct: 324 LEALGKTGKPGLARNLFEEMTAEGVEPNARTLTAVAKIYGRARWGRDALQLWDQMREKKI 383

Query: 532 EPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWV----PDEPVYGLLVDLWGKAGNVR 587
             D +  + ++ +    G + EAE +F EM+  +      PD+  Y  +++++G   +  
Sbjct: 384 PADSILCNTLLSMCADVGLVAEAEQLFEEMKDPDLTDVPQPDKWSYTAMINIYGSIKDAD 443

Query: 588 KAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
           +A + +  MLQ+G+  N+ +   ++    +  ++ DA  +L+  L  GLKP  +    LL
Sbjct: 444 RALQLFVEMLQSGIEANIMSYTIVIQCLGKANRIRDAVEMLEAGLERGLKPDDRLCGCLL 503

Query: 648 SCCTEARSPYDMGFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLE-MMHSEDR 706
           S           G   EL+       +  L+ +     D Q   D +   L+ ++++ + 
Sbjct: 504 SVVA-----LSTGEETELVLACLEKFNRNLVKLIRMLGDDQVGADELKEQLKAVLNAAET 558

Query: 707 ESKRGLVDAVVDFLHKSGLK-EEAGSVWEVAAQKNVYPDAVKEKGMSYWLINLHVMSDGT 765
           + +R   + ++D     GL       ++ +A    +Y   +  +    WL++L  +S G 
Sbjct: 559 DVRRPYCNCLIDICQNHGLPARRPRELFRLAQGYGLY-SKLHIRKDDEWLLDLRSLSVGA 617

Query: 766 AVIALSRTLAWFRKQMLISGVGPSRIDIVTGWGRRSRVTGTSLVRQAVQELLHMFSFPFF 825
           A  A    +A  +++ +     P   ++ TG        G +    A    L   + PF 
Sbjct: 618 AKTAFDDWMAALKERAVQGQTLPQSFNVFTGSSTHKFAQGLA---SAFAAHLEEAAAPFR 674

Query: 826 TENGNSGCFVGCGEPLNKWL 845
                 G FV   + L  WL
Sbjct: 675 PSESQVGSFVSSRDELVLWL 694



 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 56/198 (28%), Positives = 99/198 (50%), Gaps = 2/198 (1%)

Query: 459 AGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQS 518
           AG + DT  ++V +  L  A     A +L  +MV+ G   + +TY+ +I    + R +  
Sbjct: 169 AGFAVDTILFNVALKSLRAARRWDEAERLALDMVDSGVPLDNITYSTLITAARRCRQFAK 228

Query: 519 ALKLYRDMQNAG--FEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLL 576
           A++ +  M + G    PD+VTYS V++V       +E  A+F   R   W PD   + +L
Sbjct: 229 AVEWFERMYSPGSAVLPDEVTYSAVLDVYAQLRMKEEVLALFDRARGSGWKPDHVAFAVL 288

Query: 577 VDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGL 636
             ++G+AG+       ++ M + G +PN+   N+LL A  + G+   A +L + M   G+
Sbjct: 289 AKMFGEAGDYDGIQFVFKEMREVGTKPNIFVYNALLEALGKTGKPGLARNLFEEMTAEGV 348

Query: 637 KPSLQTYTLLLSCCTEAR 654
           +P+ +T T +      AR
Sbjct: 349 EPNARTLTAVAKIYGRAR 366



 Score = 43.5 bits (101), Expect = 0.47,   Method: Compositional matrix adjust.
 Identities = 46/223 (20%), Positives = 90/223 (40%), Gaps = 6/223 (2%)

Query: 528 NAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVR 587
           +AGF  D + +++ ++ L      DEAE +  +M       D   Y  L+    +     
Sbjct: 168 DAGFAVDTILFNVALKSLRAARRWDEAERLALDMVDSGVPLDNITYSTLITAARRCRQFA 227

Query: 588 KAWEWYEAMLQAG--LRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTL 645
           KA EW+E M   G  + P+  T +++L  + ++    +   L       G KP    + +
Sbjct: 228 KAVEWFERMYSPGSAVLPDEVTYSAVLDVYAQLRMKEEVLALFDRARGSGWKPDHVAFAV 287

Query: 646 LLSCCTEARSPYDMGFCHELMAVSGHPAHMFLLS--MPSPGPDGQNVRDHVGSFLEMMHS 703
           L     EA     + F  + M   G   ++F+ +  + + G  G+       +  E M +
Sbjct: 288 LAKMFGEAGDYDGIQFVFKEMREVGTKPNIFVYNALLEALGKTGKP--GLARNLFEEMTA 345

Query: 704 EDRESKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAV 746
           E  E     + AV     ++    +A  +W+   +K +  D++
Sbjct: 346 EGVEPNARTLTAVAKIYGRARWGRDALQLWDQMREKKIPADSI 388


>gi|302755296|ref|XP_002961072.1| hypothetical protein SELMODRAFT_75621 [Selaginella moellendorffii]
 gi|300172011|gb|EFJ38611.1| hypothetical protein SELMODRAFT_75621 [Selaginella moellendorffii]
          Length = 628

 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 95/305 (31%), Positives = 160/305 (52%), Gaps = 4/305 (1%)

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
           ++G   D  TY T +  L +A +     ++L++M R G  P+VVT+  +I    +AN ++
Sbjct: 180 ESGRIPDVVTYNTFISGLCKAGKLDKGLEMLEEMDRGGIPPDVVTFCSIISGLCKANRID 239

Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQA--AGLSPDTFTYSV 470
           +A  VFK M   GC PD +TY  ++D  ++A  LD   ++ + MQA  AG   + +T++ 
Sbjct: 240 DAFQVFKGMLERGCVPDSLTYSIMLDNLSRANRLDTVDEVLEHMQAMKAGCVMEVYTHNA 299

Query: 471 IINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAG 530
            I  L ++G    A  +   M+  G +PNL++YN +I    K+ N   A KL R M ++G
Sbjct: 300 FIGALCRSGKFPLAKNILLGMIESGSLPNLLSYNFVIDGLCKSGNVDDAWKLSRKMLDSG 359

Query: 531 -FEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKN-WVPDEPVYGLLVDLWGKAGNVRK 588
             +PD + ++ ++      G L +A  +  EM+ KN  VPD   Y  L+D   K G++++
Sbjct: 360 CCKPDVIFFNTLISGFCKAGRLSQAHQLLIEMKAKNICVPDVVTYNTLIDGQSKFGSLKQ 419

Query: 589 AWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
           A    + M   G +PNV T  +L++ + + G   +A  L   M   G  P + TY  +LS
Sbjct: 420 AKLLLQEMQAVGCKPNVVTYAALINGYAKHGMYEEAESLFDEMSAKGCFPDIITYNTVLS 479

Query: 649 CCTEA 653
             ++A
Sbjct: 480 AFSKA 484



 Score =  140 bits (352), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 129/471 (27%), Positives = 199/471 (42%), Gaps = 82/471 (17%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           G+     TYTT++  L ++    A   LL +M   GC PNVVTY  LI    +A   ++A
Sbjct: 5   GYDASVVTYTTLIDGLCKSGDLDAAQALLQKMADAGCAPNVVTYTALIDGLCKARRPHDA 64

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYS--VII 472
           +   K+M   GCEPD VTY +LI     A  +D A  + +++   G +P+  TYS  VI 
Sbjct: 65  IQTVKRMLRSGCEPDLVTYNSLIHGLCMANRMDDAGLVLQELVRNGFAPNHITYSTLVIW 124

Query: 473 NC----LGKAGHLQAAHQL----------------FC---------------EMVNQGCI 497
           NC    L +A  L     L                FC               EM+  G I
Sbjct: 125 NCRRRRLDQARGLIREMILRGSVCNLVVYIDCIFGFCEARCQSSRYECRDGDEMIESGRI 184

Query: 498 PNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAV 557
           P++VTYN  I+   KA      L++  +M   G  PD VT+  ++  L     +D+A  V
Sbjct: 185 PDVVTYNTFISGLCKAGKLDKGLEMLEEMDRGGIPPDVVTFCSIISGLCKANRIDDAFQV 244

Query: 558 FAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAM--LQAGLRPNVPTCNSLLSAF 615
           F  M  +  VPD   Y +++D   +A  +    E  E M  ++AG    V T N+ + A 
Sbjct: 245 FKGMLERGCVPDSLTYSIMLDNLSRANRLDTVDEVLEHMQAMKAGCVMEVYTHNAFIGAL 304

Query: 616 LRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTE----------ARSPYDMGFCHEL 665
            R G+   A ++L GM+  G  P+L +Y  ++    +          +R   D G C   
Sbjct: 305 CRSGKFPLAKNILLGMIESGSLPNLLSYNFVIDGLCKSGNVDDAWKLSRKMLDSGCCKPD 364

Query: 666 MA-----VSGH-------PAHMFLLSMPSPG------------PDGQNVRDHVGS----- 696
           +      +SG         AH  L+ M +               DGQ+     GS     
Sbjct: 365 VIFFNTLISGFCKAGRLSQAHQLLIEMKAKNICVPDVVTYNTLIDGQS---KFGSLKQAK 421

Query: 697 -FLEMMHSEDRESKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAV 746
             L+ M +   +       A+++   K G+ EEA S+++  + K  +PD +
Sbjct: 422 LLLQEMQAVGCKPNVVTYAALINGYAKHGMYEEAESLFDEMSAKGCFPDII 472



 Score =  136 bits (342), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 86/258 (33%), Positives = 138/258 (53%), Gaps = 9/258 (3%)

Query: 381 KLLDQMVRDGC-QPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVG-CEPDRVTYCTLID 438
           KL  +M+  GC +P+V+ +N LI  + +A  L++A  +  +M+    C PD VTY TLID
Sbjct: 350 KLSRKMLDSGCCKPDVIFFNTLISGFCKAGRLSQAHQLLIEMKAKNICVPDVVTYNTLID 409

Query: 439 IHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIP 498
             +K G L  A  + ++MQA G  P+  TY+ +IN   K G  + A  LF EM  +GC P
Sbjct: 410 GQSKFGSLKQAKLLLQEMQAVGCKPNVVTYAALINGYAKHGMYEEAESLFDEMSAKGCFP 469

Query: 499 NLVTYNIMIALQAKARNYQSALKLYRDMQN--AGFEPDKVTYSIVMEVLGHCGYLDEAEA 556
           +++TYN +++  +KA     A  +Y+ ++N  +   PD +TY I+++  G+C   D  + 
Sbjct: 470 DIITYNTVLSAFSKAGMMSKAEGVYQQLKNKTSYCSPDAITYRILID--GYCRAEDTEQG 527

Query: 557 V--FAEMRRKNWVPDEPVYGLLVDLWGKAGNV-RKAWEWYEAMLQAGLRPNVPTCNSLLS 613
           +    EM  + W  D   Y +L+    +   V  KA   Y+ ML     P+    NSL+ 
Sbjct: 528 LTLLQEMTARGWSCDSYTYNVLIAKLAETEEVPSKALAVYQQMLDQDCVPSASIFNSLVR 587

Query: 614 AFLRVGQLSDAYHLLQGM 631
            FLR G ++ A  ++Q M
Sbjct: 588 LFLRTGDVNSARSMVQEM 605



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 94/309 (30%), Positives = 153/309 (49%), Gaps = 8/309 (2%)

Query: 346 FFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQM--VRDGCQPNVVTYNRLIH 403
           F   L R  G   D  TY+ M+  L RA +   ++++L+ M  ++ GC   V T+N  I 
Sbjct: 245 FKGMLER--GCVPDSLTYSIMLDNLSRANRLDTVDEVLEHMQAMKAGCVMEVYTHNAFIG 302

Query: 404 SYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLS- 462
           +  R+     A ++   M   G  P+ ++Y  +ID   K+G +D A  + +KM  +G   
Sbjct: 303 ALCRSGKFPLAKNILLGMIESGSLPNLLSYNFVIDGLCKSGNVDDAWKLSRKMLDSGCCK 362

Query: 463 PDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQG-CIPNLVTYNIMIALQAKARNYQSALK 521
           PD   ++ +I+   KAG L  AHQL  EM  +  C+P++VTYN +I  Q+K  + + A  
Sbjct: 363 PDVIFFNTLISGFCKAGRLSQAHQLLIEMKAKNICVPDVVTYNTLIDGQSKFGSLKQAKL 422

Query: 522 LYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWG 581
           L ++MQ  G +P+ VTY+ ++      G  +EAE++F EM  K   PD   Y  ++  + 
Sbjct: 423 LLQEMQAVGCKPNVVTYAALINGYAKHGMYEEAESLFDEMSAKGCFPDIITYNTVLSAFS 482

Query: 582 KAGNVRKAWEWYEAMLQ--AGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPS 639
           KAG + KA   Y+ +    +   P+  T   L+  + R         LLQ M   G    
Sbjct: 483 KAGMMSKAEGVYQQLKNKTSYCSPDAITYRILIDGYCRAEDTEQGLTLLQEMTARGWSCD 542

Query: 640 LQTYTLLLS 648
             TY +L++
Sbjct: 543 SYTYNVLIA 551



 Score =  126 bits (317), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 74/248 (29%), Positives = 134/248 (54%), Gaps = 4/248 (1%)

Query: 357 KHDEHTYTTMVGILGRARQFGAINKLLDQM-VRDGCQPNVVTYNRLIHSYGRANYLNEAL 415
           K D   + T++    +A +    ++LL +M  ++ C P+VVTYN LI    +   L +A 
Sbjct: 362 KPDVIFFNTLISGFCKAGRLSQAHQLLIEMKAKNICVPDVVTYNTLIDGQSKFGSLKQAK 421

Query: 416 DVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCL 475
            + ++MQ VGC+P+ VTY  LI+ +AK G  + A  ++ +M A G  PD  TY+ +++  
Sbjct: 422 LLLQEMQAVGCKPNVVTYAALINGYAKHGMYEEAESLFDEMSAKGCFPDIITYNTVLSAF 481

Query: 476 GKAGHLQAAHQLFCEMVNQG--CIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEP 533
            KAG +  A  ++ ++ N+   C P+ +TY I+I    +A + +  L L ++M   G+  
Sbjct: 482 SKAGMMSKAEGVYQQLKNKTSYCSPDAITYRILIDGYCRAEDTEQGLTLLQEMTARGWSC 541

Query: 534 DKVTYSIVMEVLGHCGYL-DEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEW 592
           D  TY++++  L     +  +A AV+ +M  ++ VP   ++  LV L+ + G+V  A   
Sbjct: 542 DSYTYNVLIAKLAETEEVPSKALAVYQQMLDQDCVPSASIFNSLVRLFLRTGDVNSARSM 601

Query: 593 YEAMLQAG 600
            + M + G
Sbjct: 602 VQEMNEKG 609



 Score =  117 bits (292), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 81/270 (30%), Positives = 126/270 (46%), Gaps = 14/270 (5%)

Query: 386 MVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGF 445
           M  +G   +VVTY  LI    ++  L+ A  + ++M   GC P+ VTY  LID   KA  
Sbjct: 1   MAANGYDASVVTYTTLIDGLCKSGDLDAAQALLQKMADAGCAPNVVTYTALIDGLCKARR 60

Query: 446 LDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNI 505
              A+   K+M  +G  PD  TY+ +I+ L  A  +  A  +  E+V  G  PN +TY+ 
Sbjct: 61  PHDAIQTVKRMLRSGCEPDLVTYNSLIHGLCMANRMDDAGLVLQELVRNGFAPNHITYST 120

Query: 506 MIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFA------ 559
           ++    + R    A  L R+M   G   + V Y  +  + G C    EA    +      
Sbjct: 121 LVIWNCRRRRLDQARGLIREMILRGSVCNLVVY--IDCIFGFC----EARCQSSRYECRD 174

Query: 560 --EMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLR 617
             EM     +PD   Y   +    KAG + K  E  E M + G+ P+V T  S++S   +
Sbjct: 175 GDEMIESGRIPDVVTYNTFISGLCKAGKLDKGLEMLEEMDRGGIPPDVVTFCSIISGLCK 234

Query: 618 VGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
             ++ DA+ + +GML  G  P   TY+++L
Sbjct: 235 ANRIDDAFQVFKGMLERGCVPDSLTYSIML 264



 Score = 91.7 bits (226), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 65/231 (28%), Positives = 102/231 (44%), Gaps = 39/231 (16%)

Query: 456 MQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARN 515
           M A G      TY+ +I+ L K+G L AA  L  +M + GC PN+VTY  +I    KAR 
Sbjct: 1   MAANGYDASVVTYTTLIDGLCKSGDLDAAQALLQKMADAGCAPNVVTYTALIDGLCKARR 60

Query: 516 YQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGL 575
              A++  + M  +G EPD VTY+ ++  L     +D+A  V  E+ R  + P+   Y  
Sbjct: 61  PHDAIQTVKRMLRSGCEPDLVTYNSLIHGLCMANRMDDAGLVLQELVRNGFAPNHITYST 120

Query: 576 LVDLW--------------------GKAGNV-------------RKAWEWYEA-----ML 597
           LV +W                    G   N+             R     YE      M+
Sbjct: 121 LV-IWNCRRRRLDQARGLIREMILRGSVCNLVVYIDCIFGFCEARCQSSRYECRDGDEMI 179

Query: 598 QAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
           ++G  P+V T N+ +S   + G+L     +L+ M   G+ P + T+  ++S
Sbjct: 180 ESGRIPDVVTYNTFISGLCKAGKLDKGLEMLEEMDRGGIPPDVVTFCSIIS 230



 Score = 45.1 bits (105), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 43/177 (24%), Positives = 71/177 (40%), Gaps = 36/177 (20%)

Query: 491 MVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGY 550
           M   G   ++VTY  +I    K+ +  +A  L + M +AG  P+ VTY+           
Sbjct: 1   MAANGYDASVVTYTTLIDGLCKSGDLDAAQALLQKMADAGCAPNVVTYTA---------- 50

Query: 551 LDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNS 610
                                    L+D   KA     A +  + ML++G  P++ T NS
Sbjct: 51  -------------------------LIDGLCKARRPHDAIQTVKRMLRSGCEPDLVTYNS 85

Query: 611 LLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTY-TLLLSCCTEARSPYDMGFCHELM 666
           L+       ++ DA  +LQ ++  G  P+  TY TL++  C   R     G   E++
Sbjct: 86  LIHGLCMANRMDDAGLVLQELVRNGFAPNHITYSTLVIWNCRRRRLDQARGLIREMI 142


>gi|255660840|gb|ACU25589.1| pentatricopeptide repeat-containing protein [Pitraea cuneato-ovata]
          Length = 418

 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 82/250 (32%), Positives = 141/250 (56%)

Query: 398 YNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQ 457
           +N L+  + +   +  A  VF  +   G  P  V++ TL++ + K G LD    +   M 
Sbjct: 139 FNILMDRFCKEGEIRLAQSVFDGITKWGLRPSVVSFNTLMNGYIKLGDLDEGFRLKSAMH 198

Query: 458 AAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQ 517
           A+G+ PD +TYSV+IN L K   +  AH+LF EM+++G +PN VT+  +I    K     
Sbjct: 199 ASGVQPDVYTYSVLINGLCKESKMDEAHKLFDEMLDRGLVPNGVTFTTLIDGHCKNGKLD 258

Query: 518 SALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLV 577
            A+++Y+ M + GF PD +TY+ ++  L   G L +A+ +  EM  K   PD+  Y  L+
Sbjct: 259 LAMEIYKQMLSQGFSPDXITYNTLIYGLCKKGDLXQAKDLXDEMSMKGLKPDKITYTTLI 318

Query: 578 DLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLK 637
           D   K G++  A+E+ + M++  +R +  +  +L+S   + G+  DA  +L+ ML++GLK
Sbjct: 319 DGSCKEGDLETAFEYRKRMIKENIRLDDVSYTALISGLCKEGRSVDAEKMLREMLSVGLK 378

Query: 638 PSLQTYTLLL 647
           P   TYT+++
Sbjct: 379 PDTGTYTIVM 388



 Score =  121 bits (303), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 75/227 (33%), Positives = 118/227 (51%)

Query: 381 KLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIH 440
           +L   M   G QP+V TY+ LI+   + + ++EA  +F +M   G  P+ VT+ TLID H
Sbjct: 192 RLKSAMHASGVQPDVYTYSVLINGLCKESKMDEAHKLFDEMLDRGLVPNGVTFTTLIDGH 251

Query: 441 AKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNL 500
            K G LD+AM++YK+M + G SPD  TY+ +I  L K G L  A  L  EM  +G  P+ 
Sbjct: 252 CKNGKLDLAMEIYKQMLSQGFSPDXITYNTLIYGLCKKGDLXQAKDLXDEMSMKGLKPDK 311

Query: 501 VTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAE 560
           +TY  +I    K  + ++A +  + M       D V+Y+ ++  L   G   +AE +  E
Sbjct: 312 ITYTTLIDGSCKEGDLETAFEYRKRMIKENIRLDDVSYTALISGLCKEGRSVDAEKMLRE 371

Query: 561 MRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPT 607
           M      PD   Y +++  + K G+V+   +  + M + G  P V T
Sbjct: 372 MLSVGLKPDTGTYTIVMHEFCKNGDVKMGSKLLKEMQRDGHVPCVIT 418



 Score =  117 bits (292), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 88/304 (28%), Positives = 140/304 (46%), Gaps = 18/304 (5%)

Query: 271 FSKPSREMKIPAGLAPFS---RHFASTGNV--VESVSRILRQWKWGPLAEEALGNTNYSM 325
           F K   E + PA L  F+     F   G +   +SV   + +W   P    ++ + N  M
Sbjct: 123 FYKEILECRYPASLYFFNILMDRFCKEGEIRLAQSVFDGITKWGLRP----SVVSFNTLM 178

Query: 326 DAYQANQVLKQLQDHTVALGF-FNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLD 384
           + Y     L +        GF        +G + D +TY+ ++  L +  +    +KL D
Sbjct: 179 NGYIKLGDLDE--------GFRLKSAMHASGVQPDVYTYSVLINGLCKESKMDEAHKLFD 230

Query: 385 QMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAG 444
           +M+  G  PN VT+  LI  + +   L+ A++++KQM   G  PD +TY TLI    K G
Sbjct: 231 EMLDRGLVPNGVTFTTLIDGHCKNGKLDLAMEIYKQMLSQGFSPDXITYNTLIYGLCKKG 290

Query: 445 FLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYN 504
            L  A D+  +M   GL PD  TY+ +I+   K G L+ A +    M+ +    + V+Y 
Sbjct: 291 DLXQAKDLXDEMSMKGLKPDKITYTTLIDGSCKEGDLETAFEYRKRMIKENIRLDDVSYT 350

Query: 505 IMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRK 564
            +I+   K      A K+ R+M + G +PD  TY+IVM      G +     +  EM+R 
Sbjct: 351 ALISGLCKEGRSVDAEKMLREMLSVGLKPDTGTYTIVMHEFCKNGDVKMGSKLLKEMQRD 410

Query: 565 NWVP 568
             VP
Sbjct: 411 GHVP 414



 Score =  102 bits (254), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 72/310 (23%), Positives = 136/310 (43%), Gaps = 18/310 (5%)

Query: 356 FKHDEHTYTTMVGILGRARQFGAINKLLDQMV------------------RDGCQPNVVT 397
           F+H  H+Y TM+  L   +       L+  +V                  +   + ++  
Sbjct: 9   FRHTLHSYCTMIHFLCTHQMLPEAKSLIQIVVSRKGKDSASAVFATILETKGAQRSDIYV 68

Query: 398 YNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQ 457
           ++ LI +Y  + +L +A++ F+  +         T   +++   K  +  +    YK++ 
Sbjct: 69  FSGLITAYLESGFLRDAIECFRLTRENKYWVPFDTCRKVLEHLMKLKYFKLVWSFYKEIL 128

Query: 458 AAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQ 517
                   + ++++++   K G ++ A  +F  +   G  P++V++N ++    K  +  
Sbjct: 129 ECRYPASLYFFNILMDRFCKEGEIRLAQSVFDGITKWGLRPSVVSFNTLMNGYIKLGDLD 188

Query: 518 SALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLV 577
              +L   M  +G +PD  TYS+++  L     +DEA  +F EM  +  VP+   +  L+
Sbjct: 189 EGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMDEAHKLFDEMLDRGLVPNGVTFTTLI 248

Query: 578 DLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLK 637
           D   K G +  A E Y+ ML  G  P+  T N+L+    + G L  A  L   M   GLK
Sbjct: 249 DGHCKNGKLDLAMEIYKQMLSQGFSPDXITYNTLIYGLCKKGDLXQAKDLXDEMSMKGLK 308

Query: 638 PSLQTYTLLL 647
           P   TYT L+
Sbjct: 309 PDKITYTTLI 318



 Score = 75.5 bits (184), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 46/176 (26%), Positives = 81/176 (46%), Gaps = 35/176 (19%)

Query: 362 TYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQM 421
           T+TT++    +  +     ++  QM+  G  P+ +TYN LI+   +   L +A D+  +M
Sbjct: 243 TFTTLIDGHCKNGKLDLAMEIYKQMLSQGFSPDXITYNTLIYGLCKKGDLXQAKDLXDEM 302

Query: 422 QVVGCEPDRVTYCTLIDIHAKAGFLDVAMD------------------------------ 451
            + G +PD++TY TLID   K G L+ A +                              
Sbjct: 303 SMKGLKPDKITYTTLIDGSCKEGDLETAFEYRKRMIKENIRLDDVSYTALISGLCKEGRS 362

Query: 452 -----MYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVT 502
                M ++M + GL PDT TY+++++   K G ++   +L  EM   G +P ++T
Sbjct: 363 VDAEKMLREMLSVGLKPDTGTYTIVMHEFCKNGDVKMGSKLLKEMQRDGHVPCVIT 418



 Score = 57.4 bits (137), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 29/115 (25%), Positives = 63/115 (54%), Gaps = 1/115 (0%)

Query: 541 VMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAG 600
           V+E L    Y     + + E+    +      + +L+D + K G +R A   ++ + + G
Sbjct: 107 VLEHLMKLKYFKLVWSFYKEILECRYPASLYFFNILMDRFCKEGEIRLAQSVFDGITKWG 166

Query: 601 LRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS-CCTEAR 654
           LRP+V + N+L++ ++++G L + + L   M   G++P + TY++L++  C E++
Sbjct: 167 LRPSVVSFNTLMNGYIKLGDLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESK 221



 Score = 43.1 bits (100), Expect = 0.59,   Method: Compositional matrix adjust.
 Identities = 58/279 (20%), Positives = 110/279 (39%), Gaps = 19/279 (6%)

Query: 488 FCEMVNQGCIPNLVTYN---IMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEV 544
           +C M++  C   ++      I I +  K ++  SA+             D   +S ++  
Sbjct: 16  YCTMIHFLCTHQMLPEAKSLIQIVVSRKGKDSASAVFATILETKGAQRSDIYVFSGLITA 75

Query: 545 LGHCGYLDEAEAVFAEMRR-KNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRP 603
               G+L +A   F   R  K WVP +    +L  L  K    +  W +Y+ +L+     
Sbjct: 76  YLESGFLRDAIECFRLTRENKYWVPFDTCRKVLEHLM-KLKYFKLVWSFYKEILECRYPA 134

Query: 604 NVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGF-C 662
           ++   N L+  F + G++  A  +  G+   GL+PS+ ++  L++   +     D GF  
Sbjct: 135 SLYFFNILMDRFCKEGEIRLAQSVFDGITKWGLRPSVVSFNTLMNGYIKL-GDLDEGFRL 193

Query: 663 HELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRESKRGLV------DAV 716
              M  SG    ++  S+   G   ++  D      + M        RGLV        +
Sbjct: 194 KSAMHASGVQPDVYTYSVLINGLCKESKMDEAHKLFDEMLD------RGLVPNGVTFTTL 247

Query: 717 VDFLHKSGLKEEAGSVWEVAAQKNVYPDAVKEKGMSYWL 755
           +D   K+G  + A  +++    +   PD +    + Y L
Sbjct: 248 IDGHCKNGKLDLAMEIYKQMLSQGFSPDXITYNTLIYGL 286


>gi|302768008|ref|XP_002967424.1| hypothetical protein SELMODRAFT_231012 [Selaginella moellendorffii]
 gi|300165415|gb|EFJ32023.1| hypothetical protein SELMODRAFT_231012 [Selaginella moellendorffii]
          Length = 546

 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 89/313 (28%), Positives = 165/313 (52%), Gaps = 2/313 (0%)

Query: 339 DHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTY 398
           D   +L   +W+  + G+      Y  ++  + RARQ+     L+ +MV     P+  T+
Sbjct: 4   DWQRSLALHDWMIEKGGYAPSIFAYNVVLKNVLRARQWELAEGLVLEMVEKDLVPDKFTF 63

Query: 399 NRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQA 458
           + LI  YGRAN L +A+   ++M+  G +PD V + TLI++  K      A  ++ K++A
Sbjct: 64  STLISGYGRANRLEDAMGWLQEMEAGGIKPDLVIFSTLIELAGKVKDYSKATSLFSKLKA 123

Query: 459 AGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQS 518
           +G++PD   Y+ +IN  GKA   + A  L  EM   G +P+ V+Y I+I   A+++ Y  
Sbjct: 124 SGIAPDKVIYNSMINLYGKAKFYKEAQGLLAEMKEAGLMPDTVSYTILINAYAESQKYLE 183

Query: 519 ALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPV-YGLLV 577
           A +++ +M+  G + D  T +++++V G    + +AE +F  M +   +    V Y  ++
Sbjct: 184 AKQVFLEMKTKGIQLDVTTCNMMIDVYGKLEMVRDAEELFWSMSKTLGIQQNVVTYNTMI 243

Query: 578 DLWGKAGNVRKAWE-WYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGL 636
            ++ +A  + +A+  +Y    + G+ PNV T N++L       Q   A  L++ M   G+
Sbjct: 244 KVYKEAELLSEAFNVFYYMQNKGGVEPNVITYNTILFLHGLTLQHEKAMRLVRKMQQRGI 303

Query: 637 KPSLQTYTLLLSC 649
           +P+  TY+ L+S 
Sbjct: 304 EPNAVTYSTLISI 316



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 92/356 (25%), Positives = 166/356 (46%), Gaps = 34/356 (9%)

Query: 336 QLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNV 395
           +++D++ A   F+ L+  +G   D+  Y +M+ + G+A+ +     LL +M   G  P+ 
Sbjct: 107 KVKDYSKATSLFSKLK-ASGIAPDKVIYNSMINLYGKAKFYKEAQGLLAEMKEAGLMPDT 165

Query: 396 VTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKK 455
           V+Y  LI++Y  +    EA  VF +M+  G + D  T   +ID++ K   +  A +++  
Sbjct: 166 VSYTILINAYAESQKYLEAKQVFLEMKTKGIQLDVTTCNMMIDVYGKLEMVRDAEELFWS 225

Query: 456 M-QAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCI-PNLVTYNIMIALQAKA 513
           M +  G+  +  TY+ +I    +A  L  A  +F  M N+G + PN++TYN ++ L    
Sbjct: 226 MSKTLGIQQNVVTYNTMIKVYKEAELLSEAFNVFYYMQNKGGVEPNVITYNTILFLHGLT 285

Query: 514 RNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVY 573
             ++ A++L R MQ  G EP+ VTYS ++ + G  G  D A  +F  +R K +  DE +Y
Sbjct: 286 LQHEKAMRLVRKMQQRGIEPNAVTYSTLISIYGKTGKYDRAAFLFKTLREKGFEMDEILY 345

Query: 574 GLLVDLWGKAGNVRKAWEWYEAMLQAGLRP------------------------------ 603
             ++ ++ +AG V  A    E + Q  + P                              
Sbjct: 346 QSMIVVYERAGLVAHAKRLLEELKQPDIVPRDTAISILAKAEKLEEAAKLYWRSHEAGEI 405

Query: 604 -NVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYD 658
               T  S++  F+R  +  +A  + + M   G  P  +T  +LL+   + R   D
Sbjct: 406 KESVTYKSMIQLFMRNKRSKNAIDVFENMRESGFLPDSETTVVLLAAYGQLRQLED 461



 Score =  122 bits (307), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 77/300 (25%), Positives = 155/300 (51%), Gaps = 5/300 (1%)

Query: 332 QVLKQLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGC 391
           +V K+ +  + A   F +++ + G + +  TY T++ + G   Q     +L+ +M + G 
Sbjct: 244 KVYKEAELLSEAFNVFYYMQNKGGVEPNVITYNTILFLHGLTLQHEKAMRLVRKMQQRGI 303

Query: 392 QPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMD 451
           +PN VTY+ LI  YG+    + A  +FK ++  G E D + Y ++I ++ +AG +  A  
Sbjct: 304 EPNAVTYSTLISIYGKTGKYDRAAFLFKTLREKGFEMDEILYQSMIVVYERAGLVAHAKR 363

Query: 452 MYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQA 511
           + ++++     PD       I+ L KA  L+ A +L+      G I   VTY  MI L  
Sbjct: 364 LLEELK----QPDIVPRDTAISILAKAEKLEEAAKLYWRSHEAGEIKESVTYKSMIQLFM 419

Query: 512 KARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEP 571
           + +  ++A+ ++ +M+ +GF PD  T  +++   G    L++AE ++ +MR +    ++ 
Sbjct: 420 RNKRSKNAIDVFENMRESGFLPDSETTVVLLAAYGQLRQLEDAEKLYLDMRERGCTLEKE 479

Query: 572 VYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGM 631
           V+  ++ L+G A  +R+A + + A+   GL  +     +++  + R  +L++A  L   M
Sbjct: 480 VHFQMLKLYGDARKIREAEDMFAALKLEGLDGD-ELYLTMIRIYERASKLNEASRLFSEM 538



 Score =  118 bits (295), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 88/334 (26%), Positives = 153/334 (45%), Gaps = 9/334 (2%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRD-GCQPNVVTYNRLIHSYGRANY 410
           +  G + D  T   M+ + G+        +L   M +  G Q NVVTYN +I  Y  A  
Sbjct: 192 KTKGIQLDVTTCNMMIDVYGKLEMVRDAEELFWSMSKTLGIQQNVVTYNTMIKVYKEAEL 251

Query: 411 LNEALDVFKQMQVVG-CEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYS 469
           L+EA +VF  MQ  G  EP+ +TY T++ +H      + AM + +KMQ  G+ P+  TYS
Sbjct: 252 LSEAFNVFYYMQNKGGVEPNVITYNTILFLHGLTLQHEKAMRLVRKMQQRGIEPNAVTYS 311

Query: 470 VIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNA 529
            +I+  GK G    A  LF  +  +G   + + Y  MI +  +A     A +L  +++  
Sbjct: 312 TLISIYGKTGKYDRAAFLFKTLREKGFEMDEILYQSMIVVYERAGLVAHAKRLLEELK-- 369

Query: 530 GFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKA 589
             +PD V     + +L     L+EA  ++        + +   Y  ++ L+ +    + A
Sbjct: 370 --QPDIVPRDTAISILAKAEKLEEAAKLYWRSHEAGEIKESVTYKSMIQLFMRNKRSKNA 427

Query: 590 WEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSC 649
            + +E M ++G  P+  T   LL+A+ ++ QL DA  L   M   G     + +  +L  
Sbjct: 428 IDVFENMRESGFLPDSETTVVLLAAYGQLRQLEDAEKLYLDMRERGCTLEKEVHFQMLKL 487

Query: 650 CTEA---RSPYDMGFCHELMAVSGHPAHMFLLSM 680
             +A   R   DM    +L  + G   ++ ++ +
Sbjct: 488 YGDARKIREAEDMFAALKLEGLDGDELYLTMIRI 521


>gi|449440401|ref|XP_004137973.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g32630-like [Cucumis sativus]
          Length = 606

 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 87/293 (29%), Positives = 147/293 (50%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           GFK    TY T++      +  G +N++L  M ++    NV TY  LI  Y R++ + EA
Sbjct: 222 GFKPSVITYNTLLNGYIEIKDVGGVNEILSLMEKNVVDYNVTTYTMLIEWYSRSSKIEEA 281

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
             +F +M   G EPD   Y ++I+ + K G +  A  ++ +M    L P+ +TY  +IN 
Sbjct: 282 EKLFDEMLKKGIEPDVYIYTSIINWNCKFGNMKRAFVLFDEMTERRLVPNAYTYGALING 341

Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPD 534
             KAG ++AA  +  +M ++G   N V +N ++    K      AL+L   MQ  GFE D
Sbjct: 342 ACKAGEMKAAEMMVNDMQSKGVDVNRVIFNTLMDGYCKKGMIDEALRLQNIMQQKGFEID 401

Query: 535 KVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYE 594
             T +I+          +EA+ +   M  +   P+   + +L+D++ K  N  +A   ++
Sbjct: 402 AFTCNIIASGFCRSNRREEAKRLLLTMEERGVAPNVVSFSILIDIYCKEQNFAEARRLFK 461

Query: 595 AMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
            M + G  P+V T N+ +  + + G++ +AY L+  M   GL P   TYT L+
Sbjct: 462 VMEKKGKAPSVVTYNAFIERYCKKGKMEEAYKLINEMQERGLMPDTYTYTSLI 514



 Score =  143 bits (361), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 88/299 (29%), Positives = 151/299 (50%), Gaps = 6/299 (2%)

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINK---LLDQMVRDGCQPNVVTYNRLIHSYGRAN 409
           + G + D + YT+   I+    +FG + +   L D+M      PN  TY  LI+   +A 
Sbjct: 290 KKGIEPDVYIYTS---IINWNCKFGNMKRAFVLFDEMTERRLVPNAYTYGALINGACKAG 346

Query: 410 YLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYS 469
            +  A  +   MQ  G + +RV + TL+D + K G +D A+ +   MQ  G   D FT +
Sbjct: 347 EMKAAEMMVNDMQSKGVDVNRVIFNTLMDGYCKKGMIDEALRLQNIMQQKGFEIDAFTCN 406

Query: 470 VIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNA 529
           +I +   ++   + A +L   M  +G  PN+V+++I+I +  K +N+  A +L++ M+  
Sbjct: 407 IIASGFCRSNRREEAKRLLLTMEERGVAPNVVSFSILIDIYCKEQNFAEARRLFKVMEKK 466

Query: 530 GFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKA 589
           G  P  VTY+  +E     G ++EA  +  EM+ +  +PD   Y  L+D    +GNV +A
Sbjct: 467 GKAPSVVTYNAFIERYCKKGKMEEAYKLINEMQERGLMPDTYTYTSLIDGERASGNVDRA 526

Query: 590 WEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
            E +  M Q GL  NV T   ++S   + G+  +A+ L   M   G+ P    Y+ L++
Sbjct: 527 LELFNEMPQLGLNRNVVTYTVIISGLSKDGRADEAFKLYDEMNKEGIVPDDGIYSSLIA 585



 Score =  108 bits (270), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 88/390 (22%), Positives = 175/390 (44%), Gaps = 12/390 (3%)

Query: 274 PSREMKIPAGLAPFSR-----HFASTGNVVESVSRILRQWKWGPLAEEALGN--TNYSMD 326
           PSR+  +PA L  FSR      FA   NV++ +      W        ++G      S+ 
Sbjct: 62  PSRKPDLPAHLILFSRLYRARKFAEMKNVLKFIVNDGNLWSNVERIVSSIGGEFNEPSIV 121

Query: 327 AYQANQVLKQLQDHTV---ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLL 383
               + + +   D+ +   +L  F++ R++ GF+ DE +    +  L R+       + L
Sbjct: 122 EKFCDMLFRVYMDNRMFDSSLEVFDYARKK-GFEIDERSCFEFLLALKRSGNMELCVEFL 180

Query: 384 DQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKA 443
            QMV  G +  V ++  ++    +   +  A  +  ++   G +P  +TY TL++ + + 
Sbjct: 181 RQMVDSGIEIRVCSWTAVVDGLCKKGEVVRAKALMDELVCKGFKPSVITYNTLLNGYIEI 240

Query: 444 GFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTY 503
             +    ++   M+   +  +  TY+++I    ++  ++ A +LF EM+ +G  P++  Y
Sbjct: 241 KDVGGVNEILSLMEKNVVDYNVTTYTMLIEWYSRSSKIEEAEKLFDEMLKKGIEPDVYIY 300

Query: 504 NIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRR 563
             +I    K  N + A  L+ +M      P+  TY  ++      G +  AE +  +M+ 
Sbjct: 301 TSIINWNCKFGNMKRAFVLFDEMTERRLVPNAYTYGALINGACKAGEMKAAEMMVNDMQS 360

Query: 564 KNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSD 623
           K    +  ++  L+D + K G + +A      M Q G   +  TCN + S F R  +  +
Sbjct: 361 KGVDVNRVIFNTLMDGYCKKGMIDEALRLQNIMQQKGFEIDAFTCNIIASGFCRSNRREE 420

Query: 624 AYHLLQGMLNLGLKPSLQTYTLLLSC-CTE 652
           A  LL  M   G+ P++ ++++L+   C E
Sbjct: 421 AKRLLLTMEERGVAPNVVSFSILIDIYCKE 450



 Score =  107 bits (266), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 67/202 (33%), Positives = 102/202 (50%)

Query: 350 LRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRAN 409
           + +Q GF+ D  T   +     R+ +     +LL  M   G  PNVV+++ LI  Y +  
Sbjct: 392 IMQQKGFEIDAFTCNIIASGFCRSNRREEAKRLLLTMEERGVAPNVVSFSILIDIYCKEQ 451

Query: 410 YLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYS 469
              EA  +FK M+  G  P  VTY   I+ + K G ++ A  +  +MQ  GL PDT+TY+
Sbjct: 452 NFAEARRLFKVMEKKGKAPSVVTYNAFIERYCKKGKMEEAYKLINEMQERGLMPDTYTYT 511

Query: 470 VIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNA 529
            +I+    +G++  A +LF EM   G   N+VTY ++I+  +K      A KLY +M   
Sbjct: 512 SLIDGERASGNVDRALELFNEMPQLGLNRNVVTYTVIISGLSKDGRADEAFKLYDEMNKE 571

Query: 530 GFEPDKVTYSIVMEVLGHCGYL 551
           G  PD   YS ++  L   G L
Sbjct: 572 GIVPDDGIYSSLIASLHKVGPL 593



 Score =  103 bits (258), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 94/429 (21%), Positives = 191/429 (44%), Gaps = 33/429 (7%)

Query: 344 LGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDG------------- 390
           L FF++LR+    K D   +  +   L RAR+F  +  +L  +V DG             
Sbjct: 52  LRFFDFLRQNPSRKPDLPAHLILFSRLYRARKFAEMKNVLKFIVNDGNLWSNVERIVSSI 111

Query: 391 ----CQPNVVTY--NRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAG 444
                +P++V    + L   Y      + +L+VF   +  G E D  +    +    ++G
Sbjct: 112 GGEFNEPSIVEKFCDMLFRVYMDNRMFDSSLEVFDYARKKGFEIDERSCFEFLLALKRSG 171

Query: 445 FLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYN 504
            +++ ++  ++M  +G+     +++ +++ L K G +  A  L  E+V +G  P+++TYN
Sbjct: 172 NMELCVEFLRQMVDSGIEIRVCSWTAVVDGLCKKGEVVRAKALMDELVCKGFKPSVITYN 231

Query: 505 IMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRK 564
            ++    + ++     ++   M+    + +  TY++++E       ++EAE +F EM +K
Sbjct: 232 TLLNGYIEIKDVGGVNEILSLMEKNVVDYNVTTYTMLIEWYSRSSKIEEAEKLFDEMLKK 291

Query: 565 NWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDA 624
              PD  +Y  +++   K GN+++A+  ++ M +  L PN  T  +L++   + G++  A
Sbjct: 292 GIEPDVYIYTSIINWNCKFGNMKRAFVLFDEMTERRLVPNAYTYGALINGACKAGEMKAA 351

Query: 625 YHLLQGMLNLGLKPSLQTY-TLLLSCCTEARSPYDMGFCHELMAVSGHPAHMFLLSMPSP 683
             ++  M + G+  +   + TL+   C +      +     +M   G     F  ++ + 
Sbjct: 352 EMMVNDMQSKGVDVNRVIFNTLMDGYCKKGMIDEALRL-QNIMQQKGFEIDAFTCNIIAS 410

Query: 684 GPDGQNVRDHVGSFLEMMHSEDRESKRGLVDAVVDF--LHKSGLKE----EAGSVWEVAA 737
           G    N R+     L  M       +RG+   VV F  L     KE    EA  +++V  
Sbjct: 411 GFCRSNRREEAKRLLLTME------ERGVAPNVVSFSILIDIYCKEQNFAEARRLFKVME 464

Query: 738 QKNVYPDAV 746
           +K   P  V
Sbjct: 465 KKGKAPSVV 473


>gi|326522214|dbj|BAK04235.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 966

 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 93/318 (29%), Positives = 148/318 (46%), Gaps = 16/318 (5%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           ++ G   D +TYT ++    +A          D+M   GC PNVVTY  L+H+Y ++  L
Sbjct: 479 KKVGVNPDVYTYTILIDSFCKAGLIEQAQSWFDEMRSAGCSPNVVTYTALLHAYLKSKQL 538

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAG----------- 460
            +A D+F +M    C P+ +TY  LID   KAG +  A ++Y K+               
Sbjct: 539 YQANDIFHRMVGDACYPNAITYSALIDGLCKAGEIQKACEVYAKLIGTSDNIESDFYFEG 598

Query: 461 -----LSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARN 515
                +SP+  TY  ++N L KA  +  AH L   M+  GC PN + Y+ ++    K   
Sbjct: 599 KDTDTISPNVVTYGALVNGLCKAQKVSDAHDLLDAMLAAGCEPNQIVYDALVDGFCKVGE 658

Query: 516 YQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGL 575
             SA +++  M   G+ P   TY+ +++ +   G LD A  V ++M + +  P+   Y  
Sbjct: 659 IDSAQEVFLRMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCNPNVVTYTA 718

Query: 576 LVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLG 635
           +VD   K G   KA      M + G  PNV T  +L+    + G++     L   M   G
Sbjct: 719 MVDGLCKTGETEKALNLLSLMEKKGCSPNVVTYTALIDGLGKAGKVDAGLELFMQMKTKG 778

Query: 636 LKPSLQTYTLLLSCCTEA 653
             P+  TY +L++ C  A
Sbjct: 779 CAPNYVTYRILINHCCAA 796



 Score =  147 bits (370), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 90/311 (28%), Positives = 150/311 (48%), Gaps = 16/311 (5%)

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
           + GF  D  TYT ++  L +A++      L  +M + G  P+V TY  LI S+ +A  + 
Sbjct: 445 RKGFVPDASTYTKVITFLCQAKRVDKAFLLFQEMKKVGVNPDVYTYTILIDSFCKAGLIE 504

Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
           +A   F +M+  GC P+ VTY  L+  + K+  L  A D++ +M      P+  TYS +I
Sbjct: 505 QAQSWFDEMRSAGCSPNVVTYTALLHAYLKSKQLYQANDIFHRMVGDACYPNAITYSALI 564

Query: 473 NCLGKAGHLQAAHQLFCEMVNQG----------------CIPNLVTYNIMIALQAKARNY 516
           + L KAG +Q A +++ +++                     PN+VTY  ++    KA+  
Sbjct: 565 DGLCKAGEIQKACEVYAKLIGTSDNIESDFYFEGKDTDTISPNVVTYGALVNGLCKAQKV 624

Query: 517 QSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLL 576
             A  L   M  AG EP+++ Y  +++     G +D A+ VF  M +  ++P    Y  L
Sbjct: 625 SDAHDLLDAMLAAGCEPNQIVYDALVDGFCKVGEIDSAQEVFLRMTKCGYLPSVHTYTSL 684

Query: 577 VDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGL 636
           +D   K G +  A +    ML+    PNV T  +++    + G+   A +LL  M   G 
Sbjct: 685 IDRMFKDGRLDLAMKVLSQMLKDSCNPNVVTYTAMVDGLCKTGETEKALNLLSLMEKKGC 744

Query: 637 KPSLQTYTLLL 647
            P++ TYT L+
Sbjct: 745 SPNVVTYTALI 755



 Score =  139 bits (350), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 93/322 (28%), Positives = 152/322 (47%), Gaps = 36/322 (11%)

Query: 362 TYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQM 421
           TY  +V  L +A++    + LLD M+  GC+PN + Y+ L+  + +   ++ A +VF +M
Sbjct: 610 TYGALVNGLCKAQKVSDAHDLLDAMLAAGCEPNQIVYDALVDGFCKVGEIDSAQEVFLRM 669

Query: 422 QVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHL 481
              G  P   TY +LID   K G LD+AM +  +M     +P+  TY+ +++ L K G  
Sbjct: 670 TKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCNPNVVTYTAMVDGLCKTGET 729

Query: 482 QAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIV 541
           + A  L   M  +GC PN+VTY  +I    KA    + L+L+  M+  G  P+ VTY I+
Sbjct: 730 EKALNLLSLMEKKGCSPNVVTYTALIDGLGKAGKVDAGLELFMQMKTKGCAPNYVTYRIL 789

Query: 542 MEVLGHCGYLDEAEAVFAEMRRKNW---------------------------------VP 568
           +      G LD+A  +  EM++ +W                                  P
Sbjct: 790 INHCCAAGLLDDAHLLLDEMKQTHWPKYLQGYRTTVQGFSKRFLASLGLLEEMESHDTAP 849

Query: 569 DEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCN---SLLSAFLRVGQLSDAY 625
             PVYG+L+D + KAG +  A E ++ M++     N+ + +   SL+ A     Q+ +A 
Sbjct: 850 IAPVYGMLIDSFSKAGRLETALELHKEMMEVSSSLNMASKDMHTSLIQALCLSSQVEEAV 909

Query: 626 HLLQGMLNLGLKPSLQTYTLLL 647
            L   M   G+ P L  +  L+
Sbjct: 910 ALYSEMRRRGIVPDLSAFVCLV 931



 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 117/516 (22%), Positives = 212/516 (41%), Gaps = 88/516 (17%)

Query: 304 ILRQWKWGPLAEEALGNTNYSMDAYQANQVLKQLQDHTV---ALGFFNWLRRQAGFKHDE 360
           + ++ +WG  A + L   ++ +D     Q++  L + ++   A+ F + +R  + +  + 
Sbjct: 249 LCKEGRWGD-ALDLLEREDFKLDTVLCTQMISGLMEASLFNEAMSFLHRMRCNS-YIPNV 306

Query: 361 HTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQ 420
            TY T++    + +Q G   ++++ M+ +GC P+   +N L+H+Y  A     A  +F +
Sbjct: 307 VTYRTLLTGFLKKKQLGWCKRIINMMMTEGCNPSPSLFNSLVHTYCNAEDYAYAYKLFNR 366

Query: 421 MQVVGCEPDRVTYCTLI------DIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
           M   GC P  V Y   I      +       LD+A  +Y++M  A    +    +    C
Sbjct: 367 MNTCGCPPGYVVYNIFIGSICGREELPNPELLDLAEKVYEEMLVASCVLNKINTANFARC 426

Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPD 534
           L   G  + A Q+  EM+ +G +P+  TY  +I    +A+    A  L+++M+  G  PD
Sbjct: 427 LCGVGKFEKAFQIVKEMMRKGFVPDASTYTKVITFLCQAKRVDKAFLLFQEMKKVGVNPD 486

Query: 535 KVTYSIVMEVLGHCGYLDEAEAVFAEMRRKN----------------------------- 565
             TY+I+++     G +++A++ F EMR                                
Sbjct: 487 VYTYTILIDSFCKAGLIEQAQSWFDEMRSAGCSPNVVTYTALLHAYLKSKQLYQANDIFH 546

Query: 566 ------WVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAG----------------LRP 603
                   P+   Y  L+D   KAG ++KA E Y  ++                   + P
Sbjct: 547 RMVGDACYPNAITYSALIDGLCKAGEIQKACEVYAKLIGTSDNIESDFYFEGKDTDTISP 606

Query: 604 NVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGFC- 662
           NV T  +L++   +  ++SDA+ LL  ML  G +P+   Y  L+            GFC 
Sbjct: 607 NVVTYGALVNGLCKAQKVSDAHDLLDAMLAAGCEPNQIVYDALVD-----------GFCK 655

Query: 663 -------HEL---MAVSGH--PAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRESKR 710
                   E+   M   G+    H +   +     DG+   D     L  M  +      
Sbjct: 656 VGEIDSAQEVFLRMTKCGYLPSVHTYTSLIDRMFKDGR--LDLAMKVLSQMLKDSCNPNV 713

Query: 711 GLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAV 746
               A+VD L K+G  E+A ++  +  +K   P+ V
Sbjct: 714 VTYTAMVDGLCKTGETEKALNLLSLMEKKGCSPNVV 749



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 63/196 (32%), Positives = 104/196 (53%)

Query: 389 DGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDV 448
           D   PNVVTY  L++   +A  +++A D+   M   GCEP+++ Y  L+D   K G +D 
Sbjct: 602 DTISPNVVTYGALVNGLCKAQKVSDAHDLLDAMLAAGCEPNQIVYDALVDGFCKVGEIDS 661

Query: 449 AMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIA 508
           A +++ +M   G  P   TY+ +I+ + K G L  A ++  +M+   C PN+VTY  M+ 
Sbjct: 662 AQEVFLRMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCNPNVVTYTAMVD 721

Query: 509 LQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVP 568
              K    + AL L   M+  G  P+ VTY+ +++ LG  G +D    +F +M+ K   P
Sbjct: 722 GLCKTGETEKALNLLSLMEKKGCSPNVVTYTALIDGLGKAGKVDAGLELFMQMKTKGCAP 781

Query: 569 DEPVYGLLVDLWGKAG 584
           +   Y +L++    AG
Sbjct: 782 NYVTYRILINHCCAAG 797



 Score =  107 bits (267), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 71/261 (27%), Positives = 125/261 (47%), Gaps = 36/261 (13%)

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
           + G+    HTYT+++  + +  +     K+L QM++D C PNVVTY  ++    +     
Sbjct: 671 KCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCNPNVVTYTAMVDGLCKTGETE 730

Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
           +AL++   M+  GC P+ VTY  LID   KAG +D  ++++ +M+  G +P+  TY ++I
Sbjct: 731 KALNLLSLMEKKGCSPNVVTYTALIDGLGKAGKVDAGLELFMQMKTKGCAPNYVTYRILI 790

Query: 473 NCLGKAG-------------------HLQ--------------AAHQLFCEMVNQGCIPN 499
           N    AG                   +LQ              A+  L  EM +    P 
Sbjct: 791 NHCCAAGLLDDAHLLLDEMKQTHWPKYLQGYRTTVQGFSKRFLASLGLLEEMESHDTAPI 850

Query: 500 LVTYNIMIALQAKARNYQSALKLYRDMQNAGFE---PDKVTYSIVMEVLGHCGYLDEAEA 556
              Y ++I   +KA   ++AL+L+++M           K  ++ +++ L     ++EA A
Sbjct: 851 APVYGMLIDSFSKAGRLETALELHKEMMEVSSSLNMASKDMHTSLIQALCLSSQVEEAVA 910

Query: 557 VFAEMRRKNWVPDEPVYGLLV 577
           +++EMRR+  VPD   +  LV
Sbjct: 911 LYSEMRRRGIVPDLSAFVCLV 931



 Score =  103 bits (256), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 100/433 (23%), Positives = 159/433 (36%), Gaps = 108/433 (24%)

Query: 333 VLKQLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILG----------RARQFG----- 377
           VL  ++   + + FF W  RQ G+KH    Y  +  +LG            R+ G     
Sbjct: 107 VLGAVRSPELCVRFFLWAERQVGYKHTGACYDALAEVLGFEDPARTAERLLREIGEDDRD 166

Query: 378 AINKLLDQMVRDGC--------------------QPNVVTYNRLIHSYGRANYLNEALDV 417
            + +LL+ +VR  C                    +P+ VTYN L+     A  +  A  V
Sbjct: 167 VLGRLLNVLVRRCCLQGLWGEALEELGRLKDFGYRPSAVTYNALVQVLASAGQVEMAFRV 226

Query: 418 FKQMQVVGCEPDRVT-------------------------------YCT-LIDIHAKAGF 445
            K+M   G   DR T                                CT +I    +A  
Sbjct: 227 QKEMSASGFCMDRSTVGSFAQALCKEGRWGDALDLLEREDFKLDTVLCTQMISGLMEASL 286

Query: 446 LDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNI 505
            + AM    +M+     P+  TY  ++    K   L    ++   M+ +GC P+   +N 
Sbjct: 287 FNEAMSFLHRMRCNSYIPNVVTYRTLLTGFLKKKQLGWCKRIINMMMTEGCNPSPSLFNS 346

Query: 506 MIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVM------EVLGHCGYLDEAEAVF- 558
           ++     A +Y  A KL+  M   G  P  V Y+I +      E L +   LD AE V+ 
Sbjct: 347 LVHTYCNAEDYAYAYKLFNRMNTCGCPPGYVVYNIFIGSICGREELPNPELLDLAEKVYE 406

Query: 559 ----------------------------------AEMRRKNWVPDEPVYGLLVDLWGKAG 584
                                              EM RK +VPD   Y  ++    +A 
Sbjct: 407 EMLVASCVLNKINTANFARCLCGVGKFEKAFQIVKEMMRKGFVPDASTYTKVITFLCQAK 466

Query: 585 NVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYT 644
            V KA+  ++ M + G+ P+V T   L+ +F + G +  A      M + G  P++ TYT
Sbjct: 467 RVDKAFLLFQEMKKVGVNPDVYTYTILIDSFCKAGLIEQAQSWFDEMRSAGCSPNVVTYT 526

Query: 645 LLLSCCTEARSPY 657
            LL    +++  Y
Sbjct: 527 ALLHAYLKSKQLY 539



 Score = 56.6 bits (135), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 51/188 (27%), Positives = 90/188 (47%), Gaps = 5/188 (2%)

Query: 350 LRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRAN 409
           L  + G   +  TYT ++  LG+A +  A  +L  QM   GC PN VTY  LI+    A 
Sbjct: 738 LMEKKGCSPNVVTYTALIDGLGKAGKVDAGLELFMQMKTKGCAPNYVTYRILINHCCAAG 797

Query: 410 YLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYS 469
            L++A  +  +M+          Y T +   +K  FL  ++ + ++M++   +P    Y 
Sbjct: 798 LLDDAHLLLDEMKQTHWPKYLQGYRTTVQGFSKR-FL-ASLGLLEEMESHDTAPIAPVYG 855

Query: 470 VIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNI---MIALQAKARNYQSALKLYRDM 526
           ++I+   KAG L+ A +L  EM+      N+ + ++   +I     +   + A+ LY +M
Sbjct: 856 MLIDSFSKAGRLETALELHKEMMEVSSSLNMASKDMHTSLIQALCLSSQVEEAVALYSEM 915

Query: 527 QNAGFEPD 534
           +  G  PD
Sbjct: 916 RRRGIVPD 923


>gi|297743170|emb|CBI36037.3| unnamed protein product [Vitis vinifera]
          Length = 646

 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 96/364 (26%), Positives = 171/364 (46%), Gaps = 41/364 (11%)

Query: 323 YSMDAYQANQVLKQL-QDHTVALGF--FNWLRRQAGFKHDEHTYTTMVGILGRARQFGAI 379
           Y +D +  N +L  L +D+ V   +  F  ++R+   + DE+TYT M+ + G+  +    
Sbjct: 256 YKLDIFAYNMLLDALAKDNKVDQVYMVFKDMKRKHC-EPDEYTYTIMIRMTGKIGKADES 314

Query: 380 NKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQV---------------- 423
             L  +M   G  PN++ YN +I +      +++ + +F +M V                
Sbjct: 315 LTLFQEMTEKGYTPNLIAYNTMIQALANNRMVDKTIFLFSKMVVEVSNKFMNKSIYAYLV 374

Query: 424 --------------VGC-------EPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLS 462
                         + C       E DR  Y ++++    AG    A+D+  K+    +S
Sbjct: 375 RTLSKLGHASEAHRLFCNMWSFHDEGDRDAYMSMLESLCDAGKTTEALDLLSKIHEKRIS 434

Query: 463 PDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKL 522
            DT  Y+ +++ LGK       H L+ +M   G  P++ +YNI+I+   +A   + A+K+
Sbjct: 435 TDTVMYNTVLSALGKLKKTSDLHDLYEKMKQDGPSPDIFSYNILISSFGRAGRVEEAVKI 494

Query: 523 YRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGK 582
           + +++N+  +PD ++++ ++  LG  G +DEA   F EMR +   PD   Y  L++ +GK
Sbjct: 495 FEELENSSCKPDIISFNSLINCLGKNGDIDEAHMRFKEMREEGLSPDVVTYSTLIECFGK 554

Query: 583 AGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQT 642
              V  A   ++ ML  G  PN+ T N LL    R G+ ++A  L   +   GL P   T
Sbjct: 555 TDKVEMACRLFDEMLAEGCSPNIVTYNILLDCLERSGRTAEAVDLYAKLKQQGLTPDSIT 614

Query: 643 YTLL 646
           Y +L
Sbjct: 615 YAVL 618



 Score =  132 bits (333), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 86/344 (25%), Positives = 155/344 (45%), Gaps = 38/344 (11%)

Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLI 402
           A   +  LRR+ G+K D   Y  ++  L +  +   +  +   M R  C+P+  TY  +I
Sbjct: 244 AFEVYVELRRR-GYKLDIFAYNMLLDALAKDNKVDQVYMVFKDMKRKHCEPDEYTYTIMI 302

Query: 403 HSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKM--QAAG 460
              G+    +E+L +F++M   G  P+ + Y T+I   A    +D  + ++ KM  + + 
Sbjct: 303 RMTGKIGKADESLTLFQEMTEKGYTPNLIAYNTMIQALANNRMVDKTIFLFSKMVVEVSN 362

Query: 461 LSPDTFTYSVIINCLGKAGHLQAAHQLFCEM----------------------------- 491
              +   Y+ ++  L K GH   AH+LFC M                             
Sbjct: 363 KFMNKSIYAYLVRTLSKLGHASEAHRLFCNMWSFHDEGDRDAYMSMLESLCDAGKTTEAL 422

Query: 492 -----VNQGCI-PNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVL 545
                +++  I  + V YN +++   K +       LY  M+  G  PD  +Y+I++   
Sbjct: 423 DLLSKIHEKRISTDTVMYNTVLSALGKLKKTSDLHDLYEKMKQDGPSPDIFSYNILISSF 482

Query: 546 GHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNV 605
           G  G ++EA  +F E+   +  PD   +  L++  GK G++ +A   ++ M + GL P+V
Sbjct: 483 GRAGRVEEAVKIFEELENSSCKPDIISFNSLINCLGKNGDIDEAHMRFKEMREEGLSPDV 542

Query: 606 PTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSC 649
            T ++L+  F +  ++  A  L   ML  G  P++ TY +LL C
Sbjct: 543 VTYSTLIECFGKTDKVEMACRLFDEMLAEGCSPNIVTYNILLDC 586



 Score =  124 bits (311), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 122/525 (23%), Positives = 208/525 (39%), Gaps = 104/525 (19%)

Query: 312 PLAEEALGNTNYSMDAYQANQVLKQLQDHTVALGFFNWLRRQA-GFKHDEHTYTTMVGIL 370
           P   E L   N ++   +A+++LK L    ++L FF +       F+H+  TY  ++ IL
Sbjct: 103 PDLSEYLQTLNLTITPSEASEILKCLNHPHLSLEFFRFCSSNIPKFQHNSFTYNRLLVIL 162

Query: 371 GR------ARQFGAINKLLDQMVRDGC--------------------------------Q 392
            +      + +   I  +LD M R G                                 Q
Sbjct: 163 SKPSALRDSERLDLIRAILDDMERCGVRGSISTINILIGIFGGGADVERCFDLVKKWDLQ 222

Query: 393 PNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDM 452
            N  TY  L+ ++ R+N  N+A +V+ +++  G + D   Y  L+D  AK   +D    +
Sbjct: 223 MNCYTYKCLLQAHLRSNNSNKAFEVYVELRRRGYKLDIFAYNMLLDALAKDNKVDQVYMV 282

Query: 453 YKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAK 512
           +K M+     PD +TY+++I   GK G    +  LF EM  +G  PNL+ YN MI   A 
Sbjct: 283 FKDMKRKHCEPDEYTYTIMIRMTGKIGKADESLTLFQEMTEKGYTPNLIAYNTMIQALAN 342

Query: 513 AR-------------------------------------NYQSALKLYRDMQNAGFEPDK 535
            R                                     +   A +L+ +M +   E D+
Sbjct: 343 NRMVDKTIFLFSKMVVEVSNKFMNKSIYAYLVRTLSKLGHASEAHRLFCNMWSFHDEGDR 402

Query: 536 VTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEA 595
             Y  ++E L   G   EA  + +++  K    D  +Y  ++   GK        + YE 
Sbjct: 403 DAYMSMLESLCDAGKTTEALDLLSKIHEKRISTDTVMYNTVLSALGKLKKTSDLHDLYEK 462

Query: 596 MLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARS 655
           M Q G  P++ + N L+S+F R G++ +A  + + + N   KP + ++  L++C  +   
Sbjct: 463 MKQDGPSPDIFSYNILISSFGRAGRVEEAVKIFEELENSSCKPDIISFNSLINCLGKN-- 520

Query: 656 PYDMGFCHELMAVSGHPAHMFLLSMPSPG--PDGQNVRDHVGSF-----LEM-------M 701
               G   E        AHM    M   G  PD       +  F     +EM       M
Sbjct: 521 ----GDIDE--------AHMRFKEMREEGLSPDVVTYSTLIECFGKTDKVEMACRLFDEM 568

Query: 702 HSEDRESKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAV 746
            +E         + ++D L +SG   EA  ++    Q+ + PD++
Sbjct: 569 LAEGCSPNIVTYNILLDCLERSGRTAEAVDLYAKLKQQGLTPDSI 613



 Score =  105 bits (261), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 49/160 (30%), Positives = 93/160 (58%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           +Q G   D  +Y  ++   GRA +     K+ +++    C+P+++++N LI+  G+   +
Sbjct: 464 KQDGPSPDIFSYNILISSFGRAGRVEEAVKIFEELENSSCKPDIISFNSLINCLGKNGDI 523

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
           +EA   FK+M+  G  PD VTY TLI+   K   +++A  ++ +M A G SP+  TY+++
Sbjct: 524 DEAHMRFKEMREEGLSPDVVTYSTLIECFGKTDKVEMACRLFDEMLAEGCSPNIVTYNIL 583

Query: 472 INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQA 511
           ++CL ++G    A  L+ ++  QG  P+ +TY ++  LQ+
Sbjct: 584 LDCLERSGRTAEAVDLYAKLKQQGLTPDSITYAVLERLQS 623


>gi|255660782|gb|ACU25560.1| pentatricopeptide repeat-containing protein [Verbena halei]
          Length = 418

 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 85/279 (30%), Positives = 153/279 (54%)

Query: 370 LGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPD 429
           L + + F  +    ++ +  G   ++  +N L+HS+ +   +  A  VF  +      P 
Sbjct: 111 LMKLKYFKLVWGFYEESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPS 170

Query: 430 RVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFC 489
            V++ TL++ + K G LD    +   MQA+G+  D +TYSV+IN L KA  +  A++LF 
Sbjct: 171 VVSFNTLMNGYIKLGDLDEGFRLKNAMQASGVQSDVYTYSVLINGLCKASKMDDANELFD 230

Query: 490 EMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCG 549
           EM++ G +PN VT+  +I    K R    A+++Y+ M +    PD +TY+ ++  L   G
Sbjct: 231 EMLDNGLVPNGVTFTTLIDGHCKNRRVDVAMEIYKQMLSQSLSPDLITYNTLIYGLCKKG 290

Query: 550 YLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCN 609
            L +A+ +  EM  K   PD+  Y  L+D   K G++  A+E+ + M++  +R +     
Sbjct: 291 DLKQAQDLIDEMSMKGLKPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYT 350

Query: 610 SLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
           +L+S   + G+  DA  +L+ ML++GLKP + TYT++++
Sbjct: 351 ALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIIN 389



 Score =  116 bits (290), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 78/316 (24%), Positives = 152/316 (48%), Gaps = 10/316 (3%)

Query: 335 KQLQDHTVALGFFNWL------RRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVR 388
           +++ +H + L +F  +        + G+    + +  ++    +  +      + D + +
Sbjct: 105 RKVLEHLMKLKYFKLVWGFYEESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITK 164

Query: 389 DGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDV 448
              +P+VV++N L++ Y +   L+E   +   MQ  G + D  TY  LI+   KA  +D 
Sbjct: 165 WSLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQASGVQSDVYTYSVLINGLCKASKMDD 224

Query: 449 AMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIA 508
           A +++ +M   GL P+  T++ +I+   K   +  A +++ +M++Q   P+L+TYN +I 
Sbjct: 225 ANELFDEMLDNGLVPNGVTFTTLIDGHCKNRRVDVAMEIYKQMLSQSLSPDLITYNTLIY 284

Query: 509 LQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHC--GYLDEAEAVFAEMRRKNW 566
              K  + + A  L  +M   G +PDK+TY+ +++  G+C  G L+ A      M ++N 
Sbjct: 285 GLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLID--GNCKEGDLETAFEYRKRMIKENI 342

Query: 567 VPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYH 626
             D+  Y  L+    + G    A +    ML  GL+P + T   +++ F   G +     
Sbjct: 343 RLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCEKGDVWTGLK 402

Query: 627 LLQGMLNLGLKPSLQT 642
           LL+ M   G  PS+ T
Sbjct: 403 LLKEMQRDGYMPSVVT 418



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 62/320 (19%), Positives = 127/320 (39%), Gaps = 60/320 (18%)

Query: 356 FKHDEHTYTTMVGILGRARQFGAINKLLDQMV-----------------RDGCQ-PNVVT 397
           F+H   +Y TM+  L   +       L+  +V                   G Q  ++  
Sbjct: 9   FRHTLQSYCTMIHFLCTHQMLPEAKTLIQIVVSRKGKGSASAVFAAILETKGTQRSDIYV 68

Query: 398 YNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCT---LIDIHAKAGFLDVAMDMYK 454
           ++ LI +Y  + +L +A++ ++   ++     RV + T   +++   K  +  +    Y+
Sbjct: 69  FSGLITAYLESGFLRDAIECYR---LIKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFYE 125

Query: 455 KMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKAR 514
           +    G     + ++++++   K G ++ A  +F  +      P++V++N ++    K  
Sbjct: 126 ESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLG 185

Query: 515 NYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYG 574
           +     +L   MQ +G + D  TYS+++   G C                          
Sbjct: 186 DLDEGFRLKNAMQASGVQSDVYTYSVLIN--GLC-------------------------- 217

Query: 575 LLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNL 634
                  KA  +  A E ++ ML  GL PN  T  +L+    +  ++  A  + + ML+ 
Sbjct: 218 -------KASKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNRRVDVAMEIYKQMLSQ 270

Query: 635 GLKPSLQTY-TLLLSCCTEA 653
            L P L TY TL+   C + 
Sbjct: 271 SLSPDLITYNTLIYGLCKKG 290


>gi|302141714|emb|CBI18917.3| unnamed protein product [Vitis vinifera]
          Length = 496

 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 88/341 (25%), Positives = 159/341 (46%), Gaps = 40/341 (11%)

Query: 344 LGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIH 403
           L FFNW      F H    Y  M+ + G+A          ++M   GC+P+ + ++ +I 
Sbjct: 130 LAFFNWATNLEEFGHSPEPYMEMIDLAGKAGLAAEAVHAFNRMEDYGCKPDKIAFSVVIS 189

Query: 404 SYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSP 463
           S  +     EA   F  ++    EPD V Y +L+    +AG +  A  ++ +M+ AG+ P
Sbjct: 190 SLSKKRRAIEAQSFFDSLKD-RFEPDVVVYTSLVHGWCRAGNISEAERVFGEMKMAGIQP 248

Query: 464 DTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLY 523
           + +TYS++I+ L ++G +  AH +F EM++ GC PN +T+N ++ +  KA   +  L++Y
Sbjct: 249 NVYTYSIVIDALCRSGQITRAHDVFSEMIDVGCDPNAITFNNLMRVHVKAGRTEKVLQVY 308

Query: 524 RDMQNAGFEPDKVTYSIVMEVLGHC----------------------------------- 548
             M+  G  PD +TY+ ++E   HC                                   
Sbjct: 309 NQMKRLGCPPDAITYNFLIE--SHCRDDNLEEAVKILNSVKKGCNLNASSFNPIFGCISK 366

Query: 549 -GYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPT 607
            G ++ A  +FA+M+     P+   Y +L+ ++    +     +  + M +  + PN  T
Sbjct: 367 LGDVNSAHRMFAKMKDLKCRPNTVTYNILMRMFADKKSTDMVLKLRKEMDENEIEPNANT 426

Query: 608 CNSLLSAFLRVGQLSDAYHLLQGMLNLG-LKPSLQTYTLLL 647
              L+S F  +G  ++AY   + M+    L+PSL  Y ++L
Sbjct: 427 YRVLISTFCGIGHWNNAYSFFKEMIEEKCLRPSLPVYEMVL 467



 Score =  146 bits (368), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 77/255 (30%), Positives = 138/255 (54%), Gaps = 4/255 (1%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           + AG + + +TY+ ++  L R+ Q    + +  +M+  GC PN +T+N L+  + +A   
Sbjct: 242 KMAGIQPNVYTYSIVIDALCRSGQITRAHDVFSEMIDVGCDPNAITFNNLMRVHVKAGRT 301

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
            + L V+ QM+ +GC PD +TY  LI+ H +   L+ A+ +   ++  G + +  +++ I
Sbjct: 302 EKVLQVYNQMKRLGCPPDAITYNFLIESHCRDDNLEEAVKILNSVKK-GCNLNASSFNPI 360

Query: 472 INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF 531
             C+ K G + +AH++F +M +  C PN VTYNI++ + A  ++    LKL ++M     
Sbjct: 361 FGCISKLGDVNSAHRMFAKMKDLKCRPNTVTYNILMRMFADKKSTDMVLKLRKEMDENEI 420

Query: 532 EPDKVTYSIVMEVLGHCGYLDEAEAVFAEM-RRKNWVPDEPVYGLLVDLWGKAGNVRKAW 590
           EP+  TY +++      G+ + A + F EM   K   P  PVY +++    KAG ++K  
Sbjct: 421 EPNANTYRVLISTFCGIGHWNNAYSFFKEMIEEKCLRPSLPVYEMVLQQLRKAGQLKKHE 480

Query: 591 EWYEAMLQAGL--RP 603
           E  E M+  G   RP
Sbjct: 481 ELVEKMVNRGFVTRP 495



 Score =  139 bits (351), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 82/295 (27%), Positives = 149/295 (50%), Gaps = 4/295 (1%)

Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLI 402
           A  FF+ L+ +  F+ D   YT++V    RA       ++  +M   G QPNV TY+ +I
Sbjct: 200 AQSFFDSLKDR--FEPDVVVYTSLVHGWCRAGNISEAERVFGEMKMAGIQPNVYTYSIVI 257

Query: 403 HSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLS 462
            +  R+  +  A DVF +M  VGC+P+ +T+  L+ +H KAG  +  + +Y +M+  G  
Sbjct: 258 DALCRSGQITRAHDVFSEMIDVGCDPNAITFNNLMRVHVKAGRTEKVLQVYNQMKRLGCP 317

Query: 463 PDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKL 522
           PD  TY+ +I    +  +L+ A ++    V +GC  N  ++N +    +K  +  SA ++
Sbjct: 318 PDAITYNFLIESHCRDDNLEEAVKIL-NSVKKGCNLNASSFNPIFGCISKLGDVNSAHRM 376

Query: 523 YRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGK 582
           +  M++    P+ VTY+I+M +       D    +  EM      P+   Y +L+  +  
Sbjct: 377 FAKMKDLKCRPNTVTYNILMRMFADKKSTDMVLKLRKEMDENEIEPNANTYRVLISTFCG 436

Query: 583 AGNVRKAWEWYEAMLQAG-LRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGL 636
            G+   A+ +++ M++   LRP++P    +L    + GQL     L++ M+N G 
Sbjct: 437 IGHWNNAYSFFKEMIEEKCLRPSLPVYEMVLQQLRKAGQLKKHEELVEKMVNRGF 491


>gi|224111362|ref|XP_002315826.1| predicted protein [Populus trichocarpa]
 gi|222864866|gb|EEF01997.1| predicted protein [Populus trichocarpa]
          Length = 636

 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 101/398 (25%), Positives = 184/398 (46%)

Query: 354 AGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNE 413
           AG      TY  M+G + +         L +QM + G  P++VTYN LI  YG+   L+E
Sbjct: 126 AGIAPTVFTYNIMIGHVCKEGDMLTARSLFEQMKKMGLTPDIVTYNTLIDGYGKIGLLDE 185

Query: 414 ALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIIN 473
           ++ +F++M+ +GCEPD +TY  LI+   K   +  A + +++M+   L P+  +YS +I+
Sbjct: 186 SVCLFEEMKFMGCEPDVITYNALINSFCKFKGMLRAFEFFREMKDKDLKPNVISYSTLID 245

Query: 474 CLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEP 533
            L K G +Q A + F +M   G +PN  TY+ +I    KA N   A  L  +M     + 
Sbjct: 246 ALCKEGMMQMAIKFFVDMTRVGLLPNEFTYSSLIDANCKAGNLGEAFMLADEMLQEHVDL 305

Query: 534 DKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWY 593
           + VTY+ +++ L   G ++EAE +F  M +    P+   Y  L+    K  ++ KA E +
Sbjct: 306 NIVTYTTLLDGLCEEGMMNEAEELFRAMGKAGVTPNLQAYTALIHGHIKVRSMDKAMELF 365

Query: 594 EAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEA 653
             M +  ++P++    +++       +L +   ++  M   G+  +   YT L+    +A
Sbjct: 366 NEMREKDIKPDILLWGTIVWGLCSESKLEECKIIMTEMKESGIGANPVIYTTLMDAYFKA 425

Query: 654 RSPYDMGFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRESKRGLV 713
            +  +     E M   G    +        G   + +      +   M   D +    + 
Sbjct: 426 GNRTEAINLLEEMRDLGTEVTVVTFCALIDGLCKRGLVQEAIYYFGRMPDHDLQPNVAVY 485

Query: 714 DAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAVKEKGM 751
            A++D L K+    +A  +++    KN+ PD +    M
Sbjct: 486 TALIDGLCKNNCIGDAKKLFDEMQDKNMIPDKIAYTAM 523



 Score =  141 bits (355), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 95/356 (26%), Positives = 159/356 (44%), Gaps = 53/356 (14%)

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMV------------------RDGCQPN 394
           + GF+H   +Y  +V IL  AR +   N +L ++V                  R+ C P 
Sbjct: 2   RVGFRHTTESYCILVHILFYARMYFHANNILKELVLSSWVLPGSDVFEILWTTRNVCVPG 61

Query: 395 VVTY-----------------------------------NRLIHSYGRANYLNEALDVFK 419
              +                                   N  +H   +A   + + D F+
Sbjct: 62  FGVFDALFSVLVELGMLEAAGQCFLRMTKFRVLPKARSCNAFLHRLSKAGEGDLSRDFFR 121

Query: 420 QMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAG 479
            M   G  P   TY  +I    K G +  A  ++++M+  GL+PD  TY+ +I+  GK G
Sbjct: 122 DMVGAGIAPTVFTYNIMIGHVCKEGDMLTARSLFEQMKKMGLTPDIVTYNTLIDGYGKIG 181

Query: 480 HLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYS 539
            L  +  LF EM   GC P+++TYN +I    K +    A + +R+M++   +P+ ++YS
Sbjct: 182 LLDESVCLFEEMKFMGCEPDVITYNALINSFCKFKGMLRAFEFFREMKDKDLKPNVISYS 241

Query: 540 IVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQA 599
            +++ L   G +  A   F +M R   +P+E  Y  L+D   KAGN+ +A+   + MLQ 
Sbjct: 242 TLIDALCKEGMMQMAIKFFVDMTRVGLLPNEFTYSSLIDANCKAGNLGEAFMLADEMLQE 301

Query: 600 GLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARS 655
            +  N+ T  +LL      G +++A  L + M   G+ P+LQ YT L+    + RS
Sbjct: 302 HVDLNIVTYTTLLDGLCEEGMMNEAEELFRAMGKAGVTPNLQAYTALIHGHIKVRS 357



 Score =  139 bits (349), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 100/345 (28%), Positives = 167/345 (48%), Gaps = 2/345 (0%)

Query: 386 MVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGF 445
           MV  G  P V TYN +I    +   +  A  +F+QM+ +G  PD VTY TLID + K G 
Sbjct: 123 MVGAGIAPTVFTYNIMIGHVCKEGDMLTARSLFEQMKKMGLTPDIVTYNTLIDGYGKIGL 182

Query: 446 LDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNI 505
           LD ++ ++++M+  G  PD  TY+ +IN   K   +  A + F EM ++   PN+++Y+ 
Sbjct: 183 LDESVCLFEEMKFMGCEPDVITYNALINSFCKFKGMLRAFEFFREMKDKDLKPNVISYST 242

Query: 506 MIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKN 565
           +I    K    Q A+K + DM   G  P++ TYS +++     G L EA  +  EM +++
Sbjct: 243 LIDALCKEGMMQMAIKFFVDMTRVGLLPNEFTYSSLIDANCKAGNLGEAFMLADEMLQEH 302

Query: 566 WVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAY 625
              +   Y  L+D   + G + +A E + AM +AG+ PN+    +L+   ++V  +  A 
Sbjct: 303 VDLNIVTYTTLLDGLCEEGMMNEAEELFRAMGKAGVTPNLQAYTALIHGHIKVRSMDKAM 362

Query: 626 HLLQGMLNLGLKPSLQTY-TLLLSCCTEARSPYDMGFCHELMAVSGHPAHMFLLSMPSPG 684
            L   M    +KP +  + T++   C+E++   +       M  SG  A+  + +     
Sbjct: 363 ELFNEMREKDIKPDILLWGTIVWGLCSESKLE-ECKIIMTEMKESGIGANPVIYTTLMDA 421

Query: 685 PDGQNVRDHVGSFLEMMHSEDRESKRGLVDAVVDFLHKSGLKEEA 729
                 R    + LE M     E       A++D L K GL +EA
Sbjct: 422 YFKAGNRTEAINLLEEMRDLGTEVTVVTFCALIDGLCKRGLVQEA 466



 Score =  118 bits (295), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 82/316 (25%), Positives = 146/316 (46%), Gaps = 4/316 (1%)

Query: 342 VALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRL 401
           +A+ FF  + R  G   +E TY++++    +A   G    L D+M+++    N+VTY  L
Sbjct: 255 MAIKFFVDMTR-VGLLPNEFTYSSLIDANCKAGNLGEAFMLADEMLQEHVDLNIVTYTTL 313

Query: 402 IHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGL 461
           +        +NEA ++F+ M   G  P+   Y  LI  H K   +D AM+++ +M+   +
Sbjct: 314 LDGLCEEGMMNEAEELFRAMGKAGVTPNLQAYTALIHGHIKVRSMDKAMELFNEMREKDI 373

Query: 462 SPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALK 521
            PD   +  I+  L     L+    +  EM   G   N V Y  ++    KA N   A+ 
Sbjct: 374 KPDILLWGTIVWGLCSESKLEECKIIMTEMKESGIGANPVIYTTLMDAYFKAGNRTEAIN 433

Query: 522 LYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWG 581
           L  +M++ G E   VT+  +++ L   G + EA   F  M   +  P+  VY  L+D   
Sbjct: 434 LLEEMRDLGTEVTVVTFCALIDGLCKRGLVQEAIYYFGRMPDHDLQPNVAVYTALIDGLC 493

Query: 582 KAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQ 641
           K   +  A + ++ M    + P+     +++   L+ G   +A ++   M+ +G++  L 
Sbjct: 494 KNNCIGDAKKLFDEMQDKNMIPDKIAYTAMIDGNLKHGNFQEALNMRNKMMEMGIELDLY 553

Query: 642 TYTLL---LSCCTEAR 654
            YT L   LS C + +
Sbjct: 554 AYTSLVWGLSQCGQVQ 569



 Score =  115 bits (289), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 79/269 (29%), Positives = 129/269 (47%), Gaps = 6/269 (2%)

Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLI 402
           A+  FN +R +   K D   + T+V  L    +      ++ +M   G   N V Y  L+
Sbjct: 361 AMELFNEMREK-DIKPDILLWGTIVWGLCSESKLEECKIIMTEMKESGIGANPVIYTTLM 419

Query: 403 HSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLS 462
            +Y +A    EA+++ ++M+ +G E   VT+C LID   K G +  A+  + +M    L 
Sbjct: 420 DAYFKAGNRTEAINLLEEMRDLGTEVTVVTFCALIDGLCKRGLVQEAIYYFGRMPDHDLQ 479

Query: 463 PDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKL 522
           P+   Y+ +I+ L K   +  A +LF EM ++  IP+ + Y  MI    K  N+Q AL +
Sbjct: 480 PNVAVYTALIDGLCKNNCIGDAKKLFDEMQDKNMIPDKIAYTAMIDGNLKHGNFQEALNM 539

Query: 523 YRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGK 582
              M   G E D   Y+ ++  L  CG + +A    AEM  K  +PDE +   L+    +
Sbjct: 540 RNKMMEMGIELDLYAYTSLVWGLSQCGQVQQARKFLAEMIGKGIIPDETLCTRLLRKHYE 599

Query: 583 AGNVRKAWEWYEAMLQAGL-----RPNVP 606
            GN+ +A E    +++ GL      P VP
Sbjct: 600 LGNIDEAIELQNELVEKGLIHGNSNPAVP 628



 Score = 92.4 bits (228), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 77/312 (24%), Positives = 131/312 (41%), Gaps = 39/312 (12%)

Query: 362 TYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQM 421
           TYTT++  L          +L   M + G  PN+  Y  LIH + +   +++A+++F +M
Sbjct: 309 TYTTLLDGLCEEGMMNEAEELFRAMGKAGVTPNLQAYTALIHGHIKVRSMDKAMELFNEM 368

Query: 422 QVVGCEPDR-----------------------------------VTYCTLIDIHAKAGFL 446
           +    +PD                                    V Y TL+D + KAG  
Sbjct: 369 REKDIKPDILLWGTIVWGLCSESKLEECKIIMTEMKESGIGANPVIYTTLMDAYFKAGNR 428

Query: 447 DVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIM 506
             A+++ ++M+  G      T+  +I+ L K G +Q A   F  M +    PN+  Y  +
Sbjct: 429 TEAINLLEEMRDLGTEVTVVTFCALIDGLCKRGLVQEAIYYFGRMPDHDLQPNVAVYTAL 488

Query: 507 IALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNW 566
           I    K      A KL+ +MQ+    PDK+ Y+ +++     G   EA  +  +M     
Sbjct: 489 IDGLCKNNCIGDAKKLFDEMQDKNMIPDKIAYTAMIDGNLKHGNFQEALNMRNKMMEMGI 548

Query: 567 VPDEPVYGLLVDLWG--KAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDA 624
             D   Y  LV  WG  + G V++A ++   M+  G+ P+   C  LL     +G + +A
Sbjct: 549 ELDLYAYTSLV--WGLSQCGQVQQARKFLAEMIGKGIIPDETLCTRLLRKHYELGNIDEA 606

Query: 625 YHLLQGMLNLGL 636
             L   ++  GL
Sbjct: 607 IELQNELVEKGL 618


>gi|449531231|ref|XP_004172591.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g32630-like, partial [Cucumis sativus]
          Length = 602

 Score =  150 bits (380), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 87/293 (29%), Positives = 147/293 (50%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           GFK    TY T++      +  G +N++L  M ++    NV TY  LI  Y R++ + EA
Sbjct: 218 GFKPSVITYNTLLNGYIEIKDVGGVNEILSLMEKNVVDYNVTTYTMLIEWYSRSSKIEEA 277

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
             +F +M   G EPD   Y ++I+ + K G +  A  ++ +M    L P+ +TY  +IN 
Sbjct: 278 EKLFDEMLKKGIEPDVYIYTSIINWNCKFGNMKRAFVLFDEMTERRLVPNAYTYGALING 337

Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPD 534
             KAG ++AA  +  +M ++G   N V +N ++    K      AL+L   MQ  GFE D
Sbjct: 338 ACKAGEMKAAEMMVNDMQSKGVDVNRVIFNTLMDGYCKKGMIDEALRLQNIMQQKGFEID 397

Query: 535 KVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYE 594
             T +I+          +EA+ +   M  +   P+   + +L+D++ K  N  +A   ++
Sbjct: 398 AFTCNIIASGFCRSNRREEAKRLLLTMEERGVAPNVVSFSILIDIYCKEQNFAEARRLFK 457

Query: 595 AMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
            M + G  P+V T N+ +  + + G++ +AY L+  M   GL P   TYT L+
Sbjct: 458 VMEKKGKAPSVVTYNAFIERYCKKGKMEEAYKLINEMQERGLMPDTYTYTSLI 510



 Score =  143 bits (361), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 88/299 (29%), Positives = 151/299 (50%), Gaps = 6/299 (2%)

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINK---LLDQMVRDGCQPNVVTYNRLIHSYGRAN 409
           + G + D + YT+   I+    +FG + +   L D+M      PN  TY  LI+   +A 
Sbjct: 286 KKGIEPDVYIYTS---IINWNCKFGNMKRAFVLFDEMTERRLVPNAYTYGALINGACKAG 342

Query: 410 YLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYS 469
            +  A  +   MQ  G + +RV + TL+D + K G +D A+ +   MQ  G   D FT +
Sbjct: 343 EMKAAEMMVNDMQSKGVDVNRVIFNTLMDGYCKKGMIDEALRLQNIMQQKGFEIDAFTCN 402

Query: 470 VIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNA 529
           +I +   ++   + A +L   M  +G  PN+V+++I+I +  K +N+  A +L++ M+  
Sbjct: 403 IIASGFCRSNRREEAKRLLLTMEERGVAPNVVSFSILIDIYCKEQNFAEARRLFKVMEKK 462

Query: 530 GFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKA 589
           G  P  VTY+  +E     G ++EA  +  EM+ +  +PD   Y  L+D    +GNV +A
Sbjct: 463 GKAPSVVTYNAFIERYCKKGKMEEAYKLINEMQERGLMPDTYTYTSLIDGERASGNVDRA 522

Query: 590 WEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
            E +  M Q GL  NV T   ++S   + G+  +A+ L   M   G+ P    Y+ L++
Sbjct: 523 LELFNEMPQLGLNRNVVTYTVIISGLSKDGRADEAFKLYDEMNKEGIVPDDGIYSSLIA 581



 Score =  108 bits (269), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 88/390 (22%), Positives = 175/390 (44%), Gaps = 12/390 (3%)

Query: 274 PSREMKIPAGLAPFSR-----HFASTGNVVESVSRILRQWKWGPLAEEALGN--TNYSMD 326
           PSR+  +PA L  FSR      FA   NV++ +      W        ++G      S+ 
Sbjct: 58  PSRKPDLPAHLILFSRLYRARKFAEMKNVLKFIVNDGNLWSNVERIVSSIGGEFNEPSIV 117

Query: 327 AYQANQVLKQLQDHTV---ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLL 383
               + + +   D+ +   +L  F++ R++ GF+ DE +    +  L R+       + L
Sbjct: 118 EKFCDMLFRVYMDNRMFDSSLEVFDYARKK-GFEIDERSCFEFLLALKRSGNMELCVEFL 176

Query: 384 DQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKA 443
            QMV  G +  V ++  ++    +   +  A  +  ++   G +P  +TY TL++ + + 
Sbjct: 177 RQMVDSGIEIRVCSWTAVVDGLCKKGEVVRAKALMDELVCKGFKPSVITYNTLLNGYIEI 236

Query: 444 GFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTY 503
             +    ++   M+   +  +  TY+++I    ++  ++ A +LF EM+ +G  P++  Y
Sbjct: 237 KDVGGVNEILSLMEKNVVDYNVTTYTMLIEWYSRSSKIEEAEKLFDEMLKKGIEPDVYIY 296

Query: 504 NIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRR 563
             +I    K  N + A  L+ +M      P+  TY  ++      G +  AE +  +M+ 
Sbjct: 297 TSIINWNCKFGNMKRAFVLFDEMTERRLVPNAYTYGALINGACKAGEMKAAEMMVNDMQS 356

Query: 564 KNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSD 623
           K    +  ++  L+D + K G + +A      M Q G   +  TCN + S F R  +  +
Sbjct: 357 KGVDVNRVIFNTLMDGYCKKGMIDEALRLQNIMQQKGFEIDAFTCNIIASGFCRSNRREE 416

Query: 624 AYHLLQGMLNLGLKPSLQTYTLLLSC-CTE 652
           A  LL  M   G+ P++ ++++L+   C E
Sbjct: 417 AKRLLLTMEERGVAPNVVSFSILIDIYCKE 446



 Score =  107 bits (266), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 67/202 (33%), Positives = 102/202 (50%)

Query: 350 LRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRAN 409
           + +Q GF+ D  T   +     R+ +     +LL  M   G  PNVV+++ LI  Y +  
Sbjct: 388 IMQQKGFEIDAFTCNIIASGFCRSNRREEAKRLLLTMEERGVAPNVVSFSILIDIYCKEQ 447

Query: 410 YLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYS 469
              EA  +FK M+  G  P  VTY   I+ + K G ++ A  +  +MQ  GL PDT+TY+
Sbjct: 448 NFAEARRLFKVMEKKGKAPSVVTYNAFIERYCKKGKMEEAYKLINEMQERGLMPDTYTYT 507

Query: 470 VIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNA 529
            +I+    +G++  A +LF EM   G   N+VTY ++I+  +K      A KLY +M   
Sbjct: 508 SLIDGERASGNVDRALELFNEMPQLGLNRNVVTYTVIISGLSKDGRADEAFKLYDEMNKE 567

Query: 530 GFEPDKVTYSIVMEVLGHCGYL 551
           G  PD   YS ++  L   G L
Sbjct: 568 GIVPDDGIYSSLIASLHKVGPL 589



 Score =  103 bits (257), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 94/429 (21%), Positives = 191/429 (44%), Gaps = 33/429 (7%)

Query: 344 LGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDG------------- 390
           L FF++LR+    K D   +  +   L RAR+F  +  +L  +V DG             
Sbjct: 48  LRFFDFLRQNPSRKPDLPAHLILFSRLYRARKFAEMKNVLKFIVNDGNLWSNVERIVSSI 107

Query: 391 ----CQPNVVTY--NRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAG 444
                +P++V    + L   Y      + +L+VF   +  G E D  +    +    ++G
Sbjct: 108 GGEFNEPSIVEKFCDMLFRVYMDNRMFDSSLEVFDYARKKGFEIDERSCFEFLLALKRSG 167

Query: 445 FLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYN 504
            +++ ++  ++M  +G+     +++ +++ L K G +  A  L  E+V +G  P+++TYN
Sbjct: 168 NMELCVEFLRQMVDSGIEIRVCSWTAVVDGLCKKGEVVRAKALMDELVCKGFKPSVITYN 227

Query: 505 IMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRK 564
            ++    + ++     ++   M+    + +  TY++++E       ++EAE +F EM +K
Sbjct: 228 TLLNGYIEIKDVGGVNEILSLMEKNVVDYNVTTYTMLIEWYSRSSKIEEAEKLFDEMLKK 287

Query: 565 NWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDA 624
              PD  +Y  +++   K GN+++A+  ++ M +  L PN  T  +L++   + G++  A
Sbjct: 288 GIEPDVYIYTSIINWNCKFGNMKRAFVLFDEMTERRLVPNAYTYGALINGACKAGEMKAA 347

Query: 625 YHLLQGMLNLGLKPSLQTY-TLLLSCCTEARSPYDMGFCHELMAVSGHPAHMFLLSMPSP 683
             ++  M + G+  +   + TL+   C +      +     +M   G     F  ++ + 
Sbjct: 348 EMMVNDMQSKGVDVNRVIFNTLMDGYCKKGMIDEALRL-QNIMQQKGFEIDAFTCNIIAS 406

Query: 684 GPDGQNVRDHVGSFLEMMHSEDRESKRGLVDAVVDF--LHKSGLKE----EAGSVWEVAA 737
           G    N R+     L  M       +RG+   VV F  L     KE    EA  +++V  
Sbjct: 407 GFCRSNRREEAKRLLLTME------ERGVAPNVVSFSILIDIYCKEQNFAEARRLFKVME 460

Query: 738 QKNVYPDAV 746
           +K   P  V
Sbjct: 461 KKGKAPSVV 469


>gi|326506436|dbj|BAJ86536.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 616

 Score =  150 bits (380), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 82/293 (27%), Positives = 151/293 (51%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           G K +   Y T++  L  A ++     LL +M ++ C  + VT+N L+  + +   ++  
Sbjct: 288 GLKPNVVCYNTVLKGLCSAERWEEAEDLLAEMFQEDCPLDDVTFNILVDFFCQNGLVDRV 347

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
           +++ +QM   GC PD +TY T+I+   K G +D A+ + K M A G  P+T +Y++++  
Sbjct: 348 IELLEQMLEHGCIPDVITYTTVINGFCKEGLVDEAVMLLKNMSACGCKPNTISYTIVLKG 407

Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPD 534
           L +A     A +L   M+ QGC+PN VT+N +I    K    + A++L + M   G  PD
Sbjct: 408 LCRAERWVDAQELISHMIQQGCLPNPVTFNTLINFMCKKGLAEQAIELLKQMLVNGCSPD 467

Query: 535 KVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYE 594
            ++YS V++ LG  G  +EA  +   M  K   P+  +Y  +     + G   K  + ++
Sbjct: 468 LISYSTVIDGLGKAGKTEEALELLNVMINKGITPNTIIYSSMASALSREGRTDKIIQMFD 527

Query: 595 AMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
           ++  A +R +    N+++S+  +  +   A      M++ G  P+  TYT+L+
Sbjct: 528 SIQDATVRSDAALYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTILI 580



 Score =  129 bits (324), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 78/294 (26%), Positives = 133/294 (45%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           G   D   Y T++  + +       N +L +M   G +PNVV YN ++     A    EA
Sbjct: 253 GCTPDLRMYATIIDGICKDGHHEVANDILSRMPSYGLKPNVVCYNTVLKGLCSAERWEEA 312

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
            D+  +M    C  D VT+  L+D   + G +D  +++ ++M   G  PD  TY+ +IN 
Sbjct: 313 EDLLAEMFQEDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCIPDVITYTTVING 372

Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPD 534
             K G +  A  L   M   GC PN ++Y I++    +A  +  A +L   M   G  P+
Sbjct: 373 FCKEGLVDEAVMLLKNMSACGCKPNTISYTIVLKGLCRAERWVDAQELISHMIQQGCLPN 432

Query: 535 KVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYE 594
            VT++ ++  +   G  ++A  +  +M      PD   Y  ++D  GKAG   +A E   
Sbjct: 433 PVTFNTLINFMCKKGLAEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLN 492

Query: 595 AMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
            M+  G+ PN    +S+ SA  R G+      +   + +  ++     Y  ++S
Sbjct: 493 VMINKGITPNTIIYSSMASALSREGRTDKIIQMFDSIQDATVRSDAALYNAVIS 546



 Score =  119 bits (298), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 70/270 (25%), Positives = 131/270 (48%)

Query: 359 DEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVF 418
           D+ T+  +V    +      + +LL+QM+  GC P+V+TY  +I+ + +   ++EA+ + 
Sbjct: 327 DDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCIPDVITYTTVINGFCKEGLVDEAVMLL 386

Query: 419 KQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKA 478
           K M   GC+P+ ++Y  ++    +A     A ++   M   G  P+  T++ +IN + K 
Sbjct: 387 KNMSACGCKPNTISYTIVLKGLCRAERWVDAQELISHMIQQGCLPNPVTFNTLINFMCKK 446

Query: 479 GHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTY 538
           G  + A +L  +M+  GC P+L++Y+ +I    KA   + AL+L   M N G  P+ + Y
Sbjct: 447 GLAEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMINKGITPNTIIY 506

Query: 539 SIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQ 598
           S +   L   G  D+   +F  ++      D  +Y  ++    K     +A +++  M+ 
Sbjct: 507 SSMASALSREGRTDKIIQMFDSIQDATVRSDAALYNAVISSLCKRWETDRAIDFFAYMVS 566

Query: 599 AGLRPNVPTCNSLLSAFLRVGQLSDAYHLL 628
            G  PN  T   L+      G + +A  LL
Sbjct: 567 NGCMPNESTYTILIRGLASEGLVREAQDLL 596



 Score =  114 bits (284), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 77/347 (22%), Positives = 163/347 (46%), Gaps = 12/347 (3%)

Query: 314 AEEALGNTNYSMDAYQANQVLKQLQDHTVALGFFNWLRRQAGF--KHDEHTYTTMVGILG 371
           A + L     ++D+   N V+  + +          LR+   F  + D  +Y  ++  L 
Sbjct: 165 ALQVLHAKGCTLDSGNCNLVVSAICEQGCVDEGVELLRKLPSFGCEPDIVSYNAVLKGLC 224

Query: 372 RARQFGAINKLLDQMVR----------DGCQPNVVTYNRLIHSYGRANYLNEALDVFKQM 421
            A+++  + +L+ +MVR           GC P++  Y  +I    +  +   A D+  +M
Sbjct: 225 MAKRWDDVEELMVEMVRVHEALSQMPEHGCTPDLRMYATIIDGICKDGHHEVANDILSRM 284

Query: 422 QVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHL 481
              G +P+ V Y T++     A   + A D+  +M       D  T++++++   + G +
Sbjct: 285 PSYGLKPNVVCYNTVLKGLCSAERWEEAEDLLAEMFQEDCPLDDVTFNILVDFFCQNGLV 344

Query: 482 QAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIV 541
               +L  +M+  GCIP+++TY  +I    K      A+ L ++M   G +P+ ++Y+IV
Sbjct: 345 DRVIELLEQMLEHGCIPDVITYTTVINGFCKEGLVDEAVMLLKNMSACGCKPNTISYTIV 404

Query: 542 MEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGL 601
           ++ L       +A+ + + M ++  +P+   +  L++   K G   +A E  + ML  G 
Sbjct: 405 LKGLCRAERWVDAQELISHMIQQGCLPNPVTFNTLINFMCKKGLAEQAIELLKQMLVNGC 464

Query: 602 RPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
            P++ + ++++    + G+  +A  LL  M+N G+ P+   Y+ + S
Sbjct: 465 SPDLISYSTVIDGLGKAGKTEEALELLNVMINKGITPNTIIYSSMAS 511



 Score =  108 bits (269), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 62/214 (28%), Positives = 112/214 (52%)

Query: 354 AGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNE 413
            G K +  +YT ++  L RA ++    +L+  M++ GC PN VT+N LI+   +     +
Sbjct: 392 CGCKPNTISYTIVLKGLCRAERWVDAQELISHMIQQGCLPNPVTFNTLINFMCKKGLAEQ 451

Query: 414 ALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIIN 473
           A+++ KQM V GC PD ++Y T+ID   KAG  + A+++   M   G++P+T  YS + +
Sbjct: 452 AIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMINKGITPNTIIYSSMAS 511

Query: 474 CLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEP 533
            L + G      Q+F  + +     +   YN +I+   K      A+  +  M + G  P
Sbjct: 512 ALSREGRTDKIIQMFDSIQDATVRSDAALYNAVISSLCKRWETDRAIDFFAYMVSNGCMP 571

Query: 534 DKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWV 567
           ++ TY+I++  L   G + EA+ + +E+  +  V
Sbjct: 572 NESTYTILIRGLASEGLVREAQDLLSELCSRRAV 605



 Score = 92.8 bits (229), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 90/417 (21%), Positives = 173/417 (41%), Gaps = 63/417 (15%)

Query: 393 PNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDM 452
           PN  TY  ++ S      + +AL V  +M + GC         +++   + G    A+  
Sbjct: 106 PNAYTYFPIVRSLCARGLIADALTVLDEMPLRGCAATPPMCHVILEAACRGGGFRSAVRA 165

Query: 453 YKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAK 512
            + + A G + D+   +++++ + + G +    +L  ++ + GC P++V+YN ++     
Sbjct: 166 LQVLHAKGCTLDSGNCNLVVSAICEQGCVDEGVELLRKLPSFGCEPDIVSYNAVLKGLCM 225

Query: 513 ARNYQSA-------------------------LKLY--------RD------------MQ 527
           A+ +                            L++Y        +D            M 
Sbjct: 226 AKRWDDVEELMVEMVRVHEALSQMPEHGCTPDLRMYATIIDGICKDGHHEVANDILSRMP 285

Query: 528 NAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVR 587
           + G +P+ V Y+ V++ L      +EAE + AEM +++   D+  + +LVD + + G V 
Sbjct: 286 SYGLKPNVVCYNTVLKGLCSAERWEEAEDLLAEMFQEDCPLDDVTFNILVDFFCQNGLVD 345

Query: 588 KAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
           +  E  E ML+ G  P+V T  ++++ F + G + +A  LL+ M   G KP+  +YT++L
Sbjct: 346 RVIELLEQMLEHGCIPDVITYTTVINGFCKEGLVDEAVMLLKNMSACGCKPNTISYTIVL 405

Query: 648 SCCTEARSPYDMGFCHELMAVSGHPAHMFLL-SMPSPGPDG--------QNVRDHVGSFL 698
                A    D     EL+      +HM     +P+P            + + +     L
Sbjct: 406 KGLCRAERWVDA---QELI------SHMIQQGCLPNPVTFNTLINFMCKKGLAEQAIELL 456

Query: 699 EMMHSEDRESKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAVKEKGMSYWL 755
           + M              V+D L K+G  EEA  +  V   K + P+ +    M+  L
Sbjct: 457 KQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMINKGITPNTIIYSSMASAL 513


>gi|6630464|gb|AAF19552.1|AC007190_20 F23N19.4 [Arabidopsis thaliana]
          Length = 1244

 Score =  150 bits (379), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 107/393 (27%), Positives = 190/393 (48%), Gaps = 8/393 (2%)

Query: 355  GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
            G  H+ +TY+ ++    R  Q      +L +M++ G +PN+VT + L++ Y  +  ++EA
Sbjct: 725  GIPHNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEA 784

Query: 415  LDVFKQMQVVGCEPDRVTYCTLID---IHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
            + +  QM V G +P+ VT+ TLI    +H KA     AM +  +M A G  PD  TY V+
Sbjct: 785  VALVDQMFVTGYQPNTVTFNTLIHGLFLHNKAS---EAMALIDRMVAKGCQPDLVTYGVV 841

Query: 472  INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF 531
            +N L K G    A  L  +M      P ++ YN +I    K ++   AL L+++M+  G 
Sbjct: 842  VNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGI 901

Query: 532  EPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWE 591
             P+ VTYS ++  L + G   +A  + ++M  +   PD   +  L+D + K G + +A +
Sbjct: 902  RPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEK 961

Query: 592  WYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTY-TLLLSCC 650
             Y+ M++  + P++ T +SL++ F    +L +A  + + M++    P + TY TL+   C
Sbjct: 962  LYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFC 1021

Query: 651  TEARSPYDMGFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRESKR 710
               R    M    E M+  G   +    ++   G       D      + M S+      
Sbjct: 1022 KYKRVEEGMEVFRE-MSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNI 1080

Query: 711  GLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYP 743
               + ++D L K+G  E+A  V+E   +  + P
Sbjct: 1081 MTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEP 1113



 Score =  149 bits (376), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 117/452 (25%), Positives = 208/452 (46%), Gaps = 61/452 (13%)

Query: 267 VSERFSKPS-REMKIPAGLAPFS-----RHFASTGNVVESVSRILRQWKWGPLAE----- 315
           + ER SK   R++K+   +  FS     R F S  +    +S I++  K+  +       
Sbjct: 155 LRERLSKTRLRDIKLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKM 214

Query: 316 EALGNTNYSMDAYQANQVLKQLQ---DHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGR 372
           E LG  N   D Y  N V+         ++AL     + +  G++ D  T  ++V    R
Sbjct: 215 EVLGIRN---DLYTFNIVINCFCCCFQVSLALSILGKMLK-LGYEPDRVTIGSLVNGFCR 270

Query: 373 ARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVT 432
             +      L+D+MV  G +P++V YN +I S  +   +N+A D FK+++  G  P+ VT
Sbjct: 271 RNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVT 330

Query: 433 YCTLI-----------------------------------DIHAKAGFLDVAMDMYKKMQ 457
           Y  L+                                   D   K G +  A +++++M 
Sbjct: 331 YTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMV 390

Query: 458 AAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQ 517
              + PD  TYS +IN L     +  A+Q+F  MV++GC+ ++V+YN +I    KA+  +
Sbjct: 391 RMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVE 450

Query: 518 SALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLV 577
             +KL+R+M   G   + VTY+ +++     G +D+A+  F++M      PD   Y +L+
Sbjct: 451 DGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILL 510

Query: 578 DLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLK 637
                 G + KA   +E M +  +  ++ T  +++    + G++ +A+ L   +   GLK
Sbjct: 511 GGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLK 570

Query: 638 PSLQTYTLLLS-CCTEARSPYDMGFCHELMAV 668
           P + TYT ++S  CT+       G  HE+ A+
Sbjct: 571 PDIVTYTTMMSGLCTK-------GLLHEVEAL 595



 Score =  147 bits (370), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 103/397 (25%), Positives = 184/397 (46%), Gaps = 6/397 (1%)

Query: 353  QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
            + G++ +  T ++++     +++      L+DQM   G QPN VT+N LIH     N  +
Sbjct: 758  KLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKAS 817

Query: 413  EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
            EA+ +  +M   GC+PD VTY  +++   K G  D+A ++  KM+   L P    Y+ II
Sbjct: 818  EAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTII 877

Query: 473  NCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFE 532
            + L K  H+  A  LF EM  +G  PN+VTY+ +I+       +  A +L  DM      
Sbjct: 878  DGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKIN 937

Query: 533  PDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEW 592
            PD  T+S +++     G L EAE ++ EM +++  P    Y  L++ +     + +A + 
Sbjct: 938  PDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQM 997

Query: 593  YEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTE 652
            +E M+     P+V T N+L+  F +  ++ +   + + M   GL  +  TY +L+    +
Sbjct: 998  FEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQ 1057

Query: 653  ARSPYDMGFCHEL---MAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRESK 709
            A    D     E+   M   G P ++   +    G       +      E +     E  
Sbjct: 1058 AG---DCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPT 1114

Query: 710  RGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAV 746
                + +++ + K+G  E+   ++   + K V PD V
Sbjct: 1115 IYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVV 1151



 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 103/379 (27%), Positives = 178/379 (46%), Gaps = 19/379 (5%)

Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLI 402
           A  FF  + R+ G + +  TYT +V  L  + ++    +LL  M++    PNV+TY+ L+
Sbjct: 312 AFDFFKEIERK-GIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALL 370

Query: 403 HSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLS 462
            ++ +   + EA ++F++M  +  +PD VTY +LI+       +D A  M+  M + G  
Sbjct: 371 DAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCL 430

Query: 463 PDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKL 522
            D  +Y+ +IN   KA  ++   +LF EM  +G + N VTYN +I    +A +   A + 
Sbjct: 431 ADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEF 490

Query: 523 YRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGK 582
           +  M   G  PD  TY+I++  L   G L++A  +F +M+++    D   Y  ++    K
Sbjct: 491 FSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCK 550

Query: 583 AGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKP---- 638
            G V +AW  + ++   GL+P++ T  +++S     G L +   L   M   GL      
Sbjct: 551 TGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKNDCT 610

Query: 639 --------SLQTYTLLLSCCTEARSPYDM--GFCHE----LMAVSGHPAHMFLLSMPSPG 684
                   S +    +LSC        D+  G C +    L A SG  ++ +   +   G
Sbjct: 611 LSDGDITLSAELIKKMLSCGYAPSLLKDIKSGVCKKALSLLRAFSGKTSYDYREKLSRNG 670

Query: 685 PDGQNVRDHVGSFLEMMHS 703
                + D V  F EM+ S
Sbjct: 671 LSELKLDDAVALFGEMVKS 689



 Score =  140 bits (352), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 83/296 (28%), Positives = 152/296 (51%)

Query: 359  DEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVF 418
            D  T++ ++    +  +     KL D+MV+    P++VTY+ LI+ +   + L+EA  +F
Sbjct: 939  DVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMF 998

Query: 419  KQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKA 478
            + M    C PD VTY TLI    K   ++  M+++++M   GL  +T TY+++I  L +A
Sbjct: 999  EFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQA 1058

Query: 479  GHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTY 538
            G    A ++F EMV+ G  PN++TYN ++    K    + A+ ++  +Q +  EP   TY
Sbjct: 1059 GDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTY 1118

Query: 539  SIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQ 598
            +I++E +   G +++   +F  +  K   PD   Y  ++  + + G+  +A   ++ M +
Sbjct: 1119 NIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKE 1178

Query: 599  AGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEAR 654
             G  PN    N+L+ A LR G    +  L++ M + G      T  L+ +   + R
Sbjct: 1179 DGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTNMLHDGR 1234



 Score =  139 bits (350), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 89/320 (27%), Positives = 147/320 (45%), Gaps = 13/320 (4%)

Query: 347  FNWLRR--QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHS 404
            FN L +  Q   +     Y T++  L + +       L  +M   G +PNVVTY+ LI  
Sbjct: 855  FNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISC 914

Query: 405  YGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPD 464
                   ++A  +   M      PD  T+  LID   K G L  A  +Y +M    + P 
Sbjct: 915  LCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPS 974

Query: 465  TFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYR 524
              TYS +IN       L  A Q+F  MV++ C P++VTYN +I    K +  +  ++++R
Sbjct: 975  IVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFR 1034

Query: 525  DMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAG 584
            +M   G   + VTY+I+++ L   G  D A+ +F EM      P+   Y  L+D   K G
Sbjct: 1035 EMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNG 1094

Query: 585  NVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYT 644
             + KA   +E + ++ + P + T N ++    + G++ D + L   +   G+KP +  Y 
Sbjct: 1095 KLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYN 1154

Query: 645  LLLSCCTEARSPYDMGFCHE 664
             ++S           GFC +
Sbjct: 1155 TMIS-----------GFCRK 1163



 Score =  136 bits (342), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 83/305 (27%), Positives = 155/305 (50%), Gaps = 1/305 (0%)

Query: 343  ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLI 402
            AL  F  +  + G + +  TY++++  L    ++   ++LL  M+     P+V T++ LI
Sbjct: 889  ALNLFKEMETK-GIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALI 947

Query: 403  HSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLS 462
             ++ +   L EA  ++ +M     +P  VTY +LI+       LD A  M++ M +    
Sbjct: 948  DAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCF 1007

Query: 463  PDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKL 522
            PD  TY+ +I    K   ++   ++F EM  +G + N VTYNI+I    +A +   A ++
Sbjct: 1008 PDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEI 1067

Query: 523  YRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGK 582
            +++M + G  P+ +TY+ +++ L   G L++A  VF  ++R    P    Y ++++   K
Sbjct: 1068 FKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCK 1127

Query: 583  AGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQT 642
            AG V   W+ +  +   G++P+V   N+++S F R G   +A  L + M   G  P+   
Sbjct: 1128 AGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGC 1187

Query: 643  YTLLL 647
            Y  L+
Sbjct: 1188 YNTLI 1192



 Score =  122 bits (306), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 99/396 (25%), Positives = 179/396 (45%), Gaps = 24/396 (6%)

Query: 363  YTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQ 422
            ++ ++  + +  +F  +  L +QM   G   N  TY+ LI+ + R + L  AL V  +M 
Sbjct: 698  FSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILINCFCRRSQLPLALAVLGKMM 757

Query: 423  VVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQ 482
             +G EP+ VT  +L++ +  +  +  A+ +  +M   G  P+T T++ +I+ L       
Sbjct: 758  KLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKAS 817

Query: 483  AAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVM 542
             A  L   MV +GC P+LVTY +++    K  +   A  L   M+    EP  + Y+ ++
Sbjct: 818  EAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTII 877

Query: 543  EVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLR 602
            + L    ++D+A  +F EM  K   P+   Y  L+      G    A      M++  + 
Sbjct: 878  DGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKIN 937

Query: 603  PNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGFC 662
            P+V T ++L+ AF++ G+L +A  L   M+   + PS+ TY+ L++           GFC
Sbjct: 938  PDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLIN-----------GFC 986

Query: 663  HELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSED-----RE-SKRGLVDAV 716
                         F++S     PD       +  F +    E+     RE S+RGLV   
Sbjct: 987  MHDRLDEAKQMFEFMVS-KHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNT 1045

Query: 717  VDF------LHKSGLKEEAGSVWEVAAQKNVYPDAV 746
            V +      L ++G  + A  +++      V P+ +
Sbjct: 1046 VTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIM 1081



 Score =  117 bits (292), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 114/476 (23%), Positives = 207/476 (43%), Gaps = 56/476 (11%)

Query: 363 YTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQ 422
           +  ++  + + +++  +  L  +M   G + ++ T+N +I+ +     ++ AL +  +M 
Sbjct: 191 FNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVSLALSILGKML 250

Query: 423 VVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQ 482
            +G EPDRVT  +L++   +   +  A+ +  KM   G  PD   Y+ II+ L K   + 
Sbjct: 251 KLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVN 310

Query: 483 AAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVM 542
            A   F E+  +G  PN+VTY  ++     +  +  A +L  DM      P+ +TYS ++
Sbjct: 311 DAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALL 370

Query: 543 EVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLR 602
           +     G + EA+ +F EM R +  PD   Y  L++       + +A + ++ M+  G  
Sbjct: 371 DAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCL 430

Query: 603 PNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGFC 662
            +V + N+L++ F +  ++ D   L + M   GL  +  TY  L+            GF 
Sbjct: 431 ADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQ-----------GF- 478

Query: 663 HELMAVSGHPAHMFLLSMPSPG--PDGQNVRDHVGSFLE-------MMHSEDRESKRGLV 713
               A     A  F   M   G  PD       +G   +       ++  ED + +   +
Sbjct: 479 --FQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDL 536

Query: 714 D-----AVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAVK---------EKGMSYWLINLH 759
           D      V+  + K+G  EEA S++   + K + PD V           KG+ + +  L+
Sbjct: 537 DIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALY 596

Query: 760 -------------VMSDGTAVIALSRTLAWFRKQMLISGVGPSRI-DIVTGWGRRS 801
                         +SDG   I LS  L    K+ML  G  PS + DI +G  +++
Sbjct: 597 TKMKQEGLMKNDCTLSDGD--ITLSAELI---KKMLSCGYAPSLLKDIKSGVCKKA 647



 Score =  111 bits (277), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 77/283 (27%), Positives = 131/283 (46%), Gaps = 6/283 (2%)

Query: 382 LLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHA 441
           L  +MV+    P+++ +++L+ +  + N  +  + + +QMQ +G   +  TY  LI+   
Sbjct: 682 LFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILINCFC 741

Query: 442 KAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLV 501
           +   L +A+ +  KM   G  P+  T S ++N    +  +  A  L  +M   G  PN V
Sbjct: 742 RRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTV 801

Query: 502 TYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEM 561
           T+N +I           A+ L   M   G +PD VTY +V+  L   G  D A  +  +M
Sbjct: 802 TFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKM 861

Query: 562 RRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQL 621
            +    P   +Y  ++D   K  ++  A   ++ M   G+RPNV T +SL+S     G+ 
Sbjct: 862 EQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRW 921

Query: 622 SDAYHLLQGMLNLGLKPSLQTYTLLLSC------CTEARSPYD 658
           SDA  LL  M+   + P + T++ L+          EA   YD
Sbjct: 922 SDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYD 964



 Score =  107 bits (266), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 67/245 (27%), Positives = 121/245 (49%), Gaps = 1/245 (0%)

Query: 411 LNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSV 470
           L++A+ +F +M      P  + +  L+   AK    DV + + ++MQ  G+  + +TYS+
Sbjct: 676 LDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSI 735

Query: 471 IINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAG 530
           +INC  +   L  A  +  +M+  G  PN+VT + ++     ++    A+ L   M   G
Sbjct: 736 LINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTG 795

Query: 531 FEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAW 590
           ++P+ VT++ ++  L       EA A+   M  K   PD   YG++V+   K G+   A+
Sbjct: 796 YQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAF 855

Query: 591 EWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSC- 649
                M Q  L P V   N+++    +   + DA +L + M   G++P++ TY+ L+SC 
Sbjct: 856 NLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCL 915

Query: 650 CTEAR 654
           C   R
Sbjct: 916 CNYGR 920



 Score =  106 bits (264), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 84/323 (26%), Positives = 148/323 (45%), Gaps = 12/323 (3%)

Query: 400 RLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAA 459
           RL  +  R   LN+A+D+F  M      P  V +  L+    K    DV + + KKM+  
Sbjct: 158 RLSKTRLRDIKLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVL 217

Query: 460 GLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSA 519
           G+  D +T++++INC      +  A  +  +M+  G  P+ VT   ++    +      A
Sbjct: 218 GIRNDLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDA 277

Query: 520 LKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDL 579
           + L   M   G++PD V Y+ +++ L     +++A   F E+ RK   P+   Y  LV+ 
Sbjct: 278 VSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNG 337

Query: 580 WGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPS 639
              +     A      M++  + PNV T ++LL AF++ G++ +A  L + M+ + + P 
Sbjct: 338 LCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPD 397

Query: 640 LQTYTLLLS--CCTEARSPYDMGFCHELMAVSGHPAHMFLLSMPSPG-PDGQNVRDHVGS 696
           + TY+ L++  C  +     +  F  +LM   G  A +   +    G    + V D +  
Sbjct: 398 IVTYSSLINGLCLHDRIDEANQMF--DLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKL 455

Query: 697 FLEMMHSEDRESKRGLVDAVVDF 719
           F EM       S+RGLV   V +
Sbjct: 456 FREM-------SQRGLVSNTVTY 471



 Score =  100 bits (249), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 59/202 (29%), Positives = 104/202 (51%), Gaps = 1/202 (0%)

Query: 353  QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
            Q G   +  TY  ++  L +A       ++  +MV DG  PN++TYN L+    +   L 
Sbjct: 1038 QRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLE 1097

Query: 413  EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
            +A+ VF+ +Q    EP   TY  +I+   KAG ++   D++  +   G+ PD   Y+ +I
Sbjct: 1098 KAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMI 1157

Query: 473  NCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFE 532
            +   + G  + A  LF EM   G +PN   YN +I  + +  + +++ +L ++M++ GF 
Sbjct: 1158 SGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFA 1217

Query: 533  PDKVTYSIVMEVLGHCGYLDEA 554
             D  T  +V  +L H G LD++
Sbjct: 1218 GDASTIGLVTNML-HDGRLDKS 1238


>gi|115458970|ref|NP_001053085.1| Os04g0477200 [Oryza sativa Japonica Group]
 gi|113564656|dbj|BAF14999.1| Os04g0477200, partial [Oryza sativa Japonica Group]
          Length = 528

 Score =  150 bits (379), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 93/311 (29%), Positives = 149/311 (47%), Gaps = 4/311 (1%)

Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLL--DQMVRDGCQPNVVTYNR 400
           A+  F+ +  +   K +   Y  ++G  G   Q      LL  D+MV  G    V TYN 
Sbjct: 200 AVKVFDEMLTKGEVKPEAVMYNALIG--GYCDQGKLDTALLYRDRMVERGVAMTVATYNL 257

Query: 401 LIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAG 460
           L+H+        EA ++ ++M   G  PD  TY  LI+ H K G +  A+++++ M   G
Sbjct: 258 LVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRG 317

Query: 461 LSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSAL 520
           +     TY+ +I  L K G +Q   +LF E V +G  P+LV YN +I   + + N   A 
Sbjct: 318 VRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAF 377

Query: 521 KLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLW 580
           ++  +M+     PD VTY+ +M  L   G +DEA  +  EM  +   PD   Y  L+  +
Sbjct: 378 EIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGY 437

Query: 581 GKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSL 640
              G+V+ A      M+  G  P + T N+L+    + GQ  DA ++++ M+  G+ P  
Sbjct: 438 SMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDD 497

Query: 641 QTYTLLLSCCT 651
            TY  L+   T
Sbjct: 498 STYISLIEGLT 508



 Score =  140 bits (353), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 85/289 (29%), Positives = 148/289 (51%), Gaps = 2/289 (0%)

Query: 362 TYTTMV-GILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQ 420
           TY T++ G   R R   A++ + +   R G  PN  TY  +I  + +   ++EA+ VF +
Sbjct: 147 TYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDE 206

Query: 421 MQVVG-CEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAG 479
           M   G  +P+ V Y  LI  +   G LD A+    +M   G++    TY+++++ L   G
Sbjct: 207 MLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDG 266

Query: 480 HLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYS 539
               A++L  EM  +G  P++ TYNI+I    K  N + AL+++ +M   G     VTY+
Sbjct: 267 RGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYT 326

Query: 540 IVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQA 599
            ++  L   G + E + +F E  R+   PD  +Y  L++    +GN+ +A+E    M + 
Sbjct: 327 ALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKK 386

Query: 600 GLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
            + P+  T N+L+     +G++ +A  L+  M   G++P L TY  L+S
Sbjct: 387 RIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLIS 435



 Score =  139 bits (350), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 88/306 (28%), Positives = 147/306 (48%), Gaps = 1/306 (0%)

Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDG-CQPNVVTYNRL 401
           AL     +R + G   +++TY T++    +  +     K+ D+M+  G  +P  V YN L
Sbjct: 164 ALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNAL 223

Query: 402 IHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGL 461
           I  Y     L+ AL    +M   G      TY  L+      G    A ++ ++M   GL
Sbjct: 224 IGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGL 283

Query: 462 SPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALK 521
           +PD FTY+++IN   K G+++ A ++F  M  +G    +VTY  +I   +K    Q   K
Sbjct: 284 APDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDK 343

Query: 522 LYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWG 581
           L+ +    G  PD V Y+ ++      G +D A  +  EM +K   PD+  Y  L+    
Sbjct: 344 LFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLC 403

Query: 582 KAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQ 641
             G V +A +  + M + G++P++ T N+L+S +   G + DA  +   M+N G  P+L 
Sbjct: 404 LLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLL 463

Query: 642 TYTLLL 647
           TY  L+
Sbjct: 464 TYNALI 469



 Score = 88.6 bits (218), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 84/306 (27%), Positives = 133/306 (43%), Gaps = 57/306 (18%)

Query: 465 TFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYR 524
           T T+++++  L  AG    A +L  +M      PN VTYN +IA        Q+AL + R
Sbjct: 114 TTTFNIMLRHLCSAGKPARALELLRQMPR----PNAVTYNTVIAGFCSRGRVQAALDIMR 169

Query: 525 DM-QNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWV-PDEPVYGLLVDLWGK 582
           +M +  G  P++ TY  V+      G +DEA  VF EM  K  V P+  +Y  L+  +  
Sbjct: 170 EMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCD 229

Query: 583 AGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQT 642
            G +  A  + + M++ G+   V T N L+ A    G+ ++AY L++ M   GL P + T
Sbjct: 230 QGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFT 289

Query: 643 YTLLLSCCTEARSPYDMGFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMH 702
           Y +L++           G C E                        NV+  +  F  M  
Sbjct: 290 YNILIN-----------GHCKE-----------------------GNVKKALEIFENM-- 313

Query: 703 SEDRESKRGLVDAVVDF------LHKSGLKEEAGSVWEVAAQKNVYPDAVKEKGMSYWLI 756
                S+RG+   VV +      L K G  +E   +++ A ++ + PD V    +   LI
Sbjct: 314 -----SRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLV----LYNALI 364

Query: 757 NLHVMS 762
           N H  S
Sbjct: 365 NSHSTS 370


>gi|255660812|gb|ACU25575.1| pentatricopeptide repeat-containing protein [Glandularia incisa]
          Length = 418

 Score =  150 bits (379), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 85/279 (30%), Positives = 153/279 (54%)

Query: 370 LGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPD 429
           L + + F  +    ++ +  G   ++  +N L+HS+ +   +  A  VF  +   G  P 
Sbjct: 111 LMKLKYFKLVWGFYEESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPS 170

Query: 430 RVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFC 489
            V++ TL++ + K G LD    +   MQA+G+ PD +TYSV+IN L K   +  A++LF 
Sbjct: 171 VVSFNTLMNGYIKLGNLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFD 230

Query: 490 EMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCG 549
           EM++ G +PN VT+  +I    K      A+++Y+ M +    PD +TY+ ++  L   G
Sbjct: 231 EMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKG 290

Query: 550 YLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCN 609
            L +A+ +  EM  K   PD+  Y  L+D   K G++  A+E+ + M++  +R +     
Sbjct: 291 DLKQAQDLTDEMSMKGLKPDKITYTTLIDGSCKEGHLETAFEYRKRMIKENIRLDDVAYT 350

Query: 610 SLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
           +L+S   + G+  DA  +L+ ML++GLKP + TYT++++
Sbjct: 351 ALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIIN 389



 Score =  125 bits (313), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 80/316 (25%), Positives = 155/316 (49%), Gaps = 10/316 (3%)

Query: 335 KQLQDHTVALGFFNWL------RRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVR 388
           +++ +H + L +F  +        + G+    + +  ++    +  +      + D + +
Sbjct: 105 RKVLEHLMKLKYFKLVWGFYEESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITK 164

Query: 389 DGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDV 448
            G +P+VV++N L++ Y +   L+E   +   MQ  G +PD  TY  LI+   K   +D 
Sbjct: 165 WGLRPSVVSFNTLMNGYIKLGNLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDD 224

Query: 449 AMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIA 508
           A +++ +M   GL P+  T++ +I+   K G +  A +++ +M++Q   P+L+TYN +I 
Sbjct: 225 ANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIY 284

Query: 509 LQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHC--GYLDEAEAVFAEMRRKNW 566
              K  + + A  L  +M   G +PDK+TY+ +++  G C  G+L+ A      M ++N 
Sbjct: 285 GLCKKGDLKQAQDLTDEMSMKGLKPDKITYTTLID--GSCKEGHLETAFEYRKRMIKENI 342

Query: 567 VPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYH 626
             D+  Y  L+    + G    A +    ML  GL+P + T   +++ F + G +     
Sbjct: 343 RLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSK 402

Query: 627 LLQGMLNLGLKPSLQT 642
           LL+ M   G  PS+ T
Sbjct: 403 LLKEMQRDGYAPSVVT 418



 Score = 57.8 bits (138), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 36/159 (22%), Positives = 79/159 (49%), Gaps = 1/159 (0%)

Query: 497 IPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEA 556
           I ++  ++ +I    ++   + A++ YR  +   F     T   V+E L    Y      
Sbjct: 63  ISDIYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWG 122

Query: 557 VFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFL 616
            + E     +      + +L+  + K G +R A   ++A+ + GLRP+V + N+L++ ++
Sbjct: 123 FYEESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYI 182

Query: 617 RVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS-CCTEAR 654
           ++G L + + L   M   G++P + TY++L++  C E++
Sbjct: 183 KLGNLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESK 221


>gi|41152686|dbj|BAD08211.1| hypothetical protein [Oryza sativa Indica Group]
 gi|67906118|dbj|BAE00069.1| PPR protein [Oryza sativa Indica Group]
          Length = 794

 Score =  150 bits (379), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 92/322 (28%), Positives = 150/322 (46%), Gaps = 35/322 (10%)

Query: 362 TYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQM 421
           TY +++  L +A+      ++L  MV++G  PN  TYN ++H Y  +    EA+   K+M
Sbjct: 236 TYNSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKM 295

Query: 422 QVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHL 481
              G EPD VTY +L+D   K G    A  M+  M   GL P+  TY  ++      G L
Sbjct: 296 HSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGAL 355

Query: 482 QAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIV 541
              H L   MV  G  PN   ++I+I   AK      A+ ++  M+  G  PD VTY  V
Sbjct: 356 VEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTV 415

Query: 542 MEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLV------DLWGKA------------ 583
           + +L   G +++A   F +M  +   P   VY  L+      D W KA            
Sbjct: 416 IGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGI 475

Query: 584 -----------------GNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYH 626
                            G V ++ + ++ M++ G++PN+ T ++L+  +   G++ +A  
Sbjct: 476 CLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPNIITYSTLIDGYCLAGKMDEATK 535

Query: 627 LLQGMLNLGLKPSLQTYTLLLS 648
           LL  M+++G+KP   TY  L++
Sbjct: 536 LLASMVSVGMKPDCVTYNTLIN 557



 Score =  145 bits (367), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 102/416 (24%), Positives = 193/416 (46%), Gaps = 5/416 (1%)

Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLI 402
           A+GF   +    G + D  TY +++  L +  +     K+ D M + G +P + TY  L+
Sbjct: 288 AIGFLKKMHSD-GVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLL 346

Query: 403 HSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLS 462
             Y     L E   +   M   G  P+   +  LI  +AK G +D AM ++ KM+  GL+
Sbjct: 347 QGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLN 406

Query: 463 PDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKL 522
           PDT TY  +I  L K+G ++ A + F +M+++   P  + YN +I        +  A +L
Sbjct: 407 PDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKEL 466

Query: 523 YRDMQNAGFEPDKVTYSIVMEVLGHC--GYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLW 580
             +M + G   D + ++ +++   HC  G + E+E +F  M R    P+   Y  L+D +
Sbjct: 467 ILEMLDRGICLDTIFFNSIID--SHCKEGRVIESEKLFDLMVRIGVKPNIITYSTLIDGY 524

Query: 581 GKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSL 640
             AG + +A +   +M+  G++P+  T N+L++ + ++ ++ DA  L + M + G+ P +
Sbjct: 525 CLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDI 584

Query: 641 QTYTLLLSCCTEARSPYDMGFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEM 700
            TY ++L    + R        +  +  SG    +   ++   G    N+ D      + 
Sbjct: 585 ITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQN 644

Query: 701 MHSEDRESKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAVKEKGMSYWLI 756
           +   D + +    + ++  L K G  +EA  ++   +   + PD      M+  LI
Sbjct: 645 LCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLI 700



 Score =  142 bits (359), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 95/327 (29%), Positives = 159/327 (48%), Gaps = 4/327 (1%)

Query: 353 QAGFKHDEHTYTTMV-GILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           + GF+ D   +T ++ G+    R   A++ +L +M + GC PNV +YN L+      N  
Sbjct: 119 KKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTQLGCIPNVFSYNILLKGLCDENRS 178

Query: 412 NEALDVFKQMQVVG--CEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYS 469
            EAL++ + M   G  C PD V+Y T+I+   K G LD A   Y +M   G+ P+  TY+
Sbjct: 179 QEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYN 238

Query: 470 VIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNA 529
            II  L KA  +  A ++   MV  G +PN  TYN ++     +   + A+   + M + 
Sbjct: 239 SIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSD 298

Query: 530 GFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKA 589
           G EPD VTY+ +M+ L   G   EA  +F  M ++   P+   YG L+  +   G + + 
Sbjct: 299 GVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEM 358

Query: 590 WEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTY-TLLLS 648
               + M++ G+ PN    + L+ A+ + G++  A  +   M   GL P   TY T++  
Sbjct: 359 HGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGI 418

Query: 649 CCTEARSPYDMGFCHELMAVSGHPAHM 675
            C   R    M +  +++     P ++
Sbjct: 419 LCKSGRVEDAMRYFEQMIDERLSPGNI 445



 Score =  126 bits (317), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 74/244 (30%), Positives = 133/244 (54%)

Query: 381 KLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIH 440
           KL D MVR G +PN++TY+ LI  Y  A  ++EA  +   M  VG +PD VTY TLI+ +
Sbjct: 500 KLFDLMVRIGVKPNIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGY 559

Query: 441 AKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNL 500
            K   ++ A+ ++++M+++G+SPD  TY++I+  L +     AA +L+  +   G    L
Sbjct: 560 CKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLEL 619

Query: 501 VTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAE 560
            TYNI++    K      AL++++++     + +  T++I++  L   G  DEA+ +FA 
Sbjct: 620 STYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAA 679

Query: 561 MRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQ 620
           +     VPD   Y L+ +   + G + +  + + +M + G   N    NS++   L+ G 
Sbjct: 680 LSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIVRKLLQRGD 739

Query: 621 LSDA 624
           ++ A
Sbjct: 740 ITRA 743



 Score =  103 bits (258), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 90/359 (25%), Positives = 152/359 (42%), Gaps = 5/359 (1%)

Query: 389 DGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDV 448
           D   PN+ TY  LI S   A  L+        +   G   D + +  L+           
Sbjct: 85  DEVTPNLCTYGILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSD 144

Query: 449 AMDM-YKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQG--CIPNLVTYNI 505
           AMD+  ++M   G  P+ F+Y++++  L      Q A +L   M + G  C P++V+Y  
Sbjct: 145 AMDIVLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTT 204

Query: 506 MIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKN 565
           +I    K  +   A   Y +M + G  P+ VTY+ ++  L     +D+A  V   M +  
Sbjct: 205 VINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYNSIIAALCKAQAMDKAMEVLTSMVKNG 264

Query: 566 WVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAY 625
            +P+   Y  +V  +  +G  ++A  + + M   G+ P+V T NSL+    + G+ ++A 
Sbjct: 265 VMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEAR 324

Query: 626 HLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGFCHELMAVSG-HPAHMFLLSMPSPG 684
            +   M   GLKP + TY  LL       +  +M    +LM  +G HP H ++ S+    
Sbjct: 325 KMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNH-YVFSILICA 383

Query: 685 PDGQNVRDHVGSFLEMMHSEDRESKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYP 743
              Q   D        M  +           V+  L KSG  E+A   +E    + + P
Sbjct: 384 YAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSP 442


>gi|302815701|ref|XP_002989531.1| hypothetical protein SELMODRAFT_130008 [Selaginella moellendorffii]
 gi|300142709|gb|EFJ09407.1| hypothetical protein SELMODRAFT_130008 [Selaginella moellendorffii]
          Length = 436

 Score =  150 bits (379), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 89/298 (29%), Positives = 161/298 (54%), Gaps = 5/298 (1%)

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
           +AG+      Y  ++  L +   F    KLL  M     +   + Y+ +I+   + N + 
Sbjct: 38  EAGYTLRASGYGILISCLCKVGNFDEAYKLLHTMRLKRFKRKAIAYSTIINWLCKLNRVE 97

Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
           EA ++ ++M      PD +TY  +++   K   +D A+   ++M   G+ PD F Y+ ++
Sbjct: 98  EARELIEKMARYA-PPDALTYGPIVERLCKTKRIDDALATVEEMATRGIKPDAFIYNFVL 156

Query: 473 NCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFE 532
           + L +   ++ A  LF +MV Q   PN+VTYN +I    KA   ++A +L+++M   G+ 
Sbjct: 157 SGLCQEEKVEEARLLFEKMVKQRINPNVVTYNTLINGLCKAWRIETAYELFKEMAGKGYV 216

Query: 533 PDKVTYSIVMEVLGHCGYLD--EAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAW 590
           P +V+Y+ +++  G C   D   A+ VF +M R N VP+   Y  L+D   K+G V+ A 
Sbjct: 217 PTEVSYNTLID--GFCKKKDLVAAKDVFDKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAA 274

Query: 591 EWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
           E  + M++ G+ PNV T + L+  F +V ++ +A+ LL+ M+  G+ P++ TY +LL+
Sbjct: 275 EVLDGMVKKGVTPNVATYSCLIDGFCKVRRVDEAHKLLEQMVTQGIAPTVVTYNILLN 332



 Score =  138 bits (347), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 85/237 (35%), Positives = 122/237 (51%), Gaps = 4/237 (1%)

Query: 362 TYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQM 421
           TY T++  L +A +     +L  +M   G  P  V+YN LI  + +   L  A DVF +M
Sbjct: 186 TYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFCKKKDLVAAKDVFDKM 245

Query: 422 QVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHL 481
               C P+ VTY TLID  +K+G +  A ++   M   G++P+  TYS +I+   K   +
Sbjct: 246 VRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVATYSCLIDGFCKVRRV 305

Query: 482 QAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIV 541
             AH+L  +MV QG  P +VTYNI++    +A   + A KL+R M      P  VTY+ +
Sbjct: 306 DEAHKLLEQMVTQGIAPTVVTYNILLNSLCRADKLEDAFKLFRGMAQRRCHPTVVTYNTL 365

Query: 542 MEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWG--KAGNVRKAWEWYEAM 596
           +  L H   LD A  ++AEM  K   PD   Y  L   WG  +AG V +A E  E M
Sbjct: 366 LRALCHHKQLDGAHRLYAEMIAKGCPPDAITYDTLA--WGLTRAGKVHEAQELMEKM 420



 Score =  137 bits (345), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 88/336 (26%), Positives = 160/336 (47%), Gaps = 13/336 (3%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           R   FK     Y+T++  L +  +     +L+++M R    P+ +TY  ++    +   +
Sbjct: 72  RLKRFKRKAIAYSTIINWLCKLNRVEEARELIEKMARYA-PPDALTYGPIVERLCKTKRI 130

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
           ++AL   ++M   G +PD   Y  ++    +   ++ A  +++KM    ++P+  TY+ +
Sbjct: 131 DDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLLFEKMVKQRINPNVVTYNTL 190

Query: 472 INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF 531
           IN L KA  ++ A++LF EM  +G +P  V+YN +I    K ++  +A  ++  M  +  
Sbjct: 191 INGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFCKKKDLVAAKDVFDKMVRSNC 250

Query: 532 EPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWE 591
            P+ VTY+ +++ L   G +  A  V   M +K   P+   Y  L+D + K   V +A +
Sbjct: 251 VPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVATYSCLIDGFCKVRRVDEAHK 310

Query: 592 WYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCT 651
             E M+  G+ P V T N LL++  R  +L DA+ L +GM      P++ TY  LL    
Sbjct: 311 LLEQMVTQGIAPTVVTYNILLNSLCRADKLEDAFKLFRGMAQRRCHPTVVTYNTLLR--- 367

Query: 652 EARSPYDMGFCHELMAVSGHPAHMFLLSMPSPGPDG 687
                     CH       H  +  +++   P PD 
Sbjct: 368 --------ALCHHKQLDGAHRLYAEMIAKGCP-PDA 394



 Score =  134 bits (338), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 86/277 (31%), Positives = 134/277 (48%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           G K D   Y  ++  L +  +      L ++MV+    PNVVTYN LI+   +A  +  A
Sbjct: 144 GIKPDAFIYNFVLSGLCQEEKVEEARLLFEKMVKQRINPNVVTYNTLINGLCKAWRIETA 203

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
            ++FK+M   G  P  V+Y TLID   K   L  A D++ KM  +   P+  TY+ +I+ 
Sbjct: 204 YELFKEMAGKGYVPTEVSYNTLIDGFCKKKDLVAAKDVFDKMVRSNCVPNVVTYTTLIDG 263

Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPD 534
           L K+G +QAA ++   MV +G  PN+ TY+ +I    K R    A KL   M   G  P 
Sbjct: 264 LSKSGKVQAAAEVLDGMVKKGVTPNVATYSCLIDGFCKVRRVDEAHKLLEQMVTQGIAPT 323

Query: 535 KVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYE 594
            VTY+I++  L     L++A  +F  M ++   P    Y  L+        +  A   Y 
Sbjct: 324 VVTYNILLNSLCRADKLEDAFKLFRGMAQRRCHPTVVTYNTLLRALCHHKQLDGAHRLYA 383

Query: 595 AMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGM 631
            M+  G  P+  T ++L     R G++ +A  L++ M
Sbjct: 384 EMIAKGCPPDAITYDTLAWGLTRAGKVHEAQELMEKM 420



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 81/288 (28%), Positives = 138/288 (47%)

Query: 359 DEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVF 418
           D  TY  +V  L + ++       +++M   G +P+   YN ++    +   + EA  +F
Sbjct: 113 DALTYGPIVERLCKTKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLLF 172

Query: 419 KQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKA 478
           ++M      P+ VTY TLI+   KA  ++ A +++K+M   G  P   +Y+ +I+   K 
Sbjct: 173 EKMVKQRINPNVVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFCKK 232

Query: 479 GHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTY 538
             L AA  +F +MV   C+PN+VTY  +I   +K+   Q+A ++   M   G  P+  TY
Sbjct: 233 KDLVAAKDVFDKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVATY 292

Query: 539 SIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQ 598
           S +++       +DEA  +  +M  +   P    Y +L++   +A  +  A++ +  M Q
Sbjct: 293 SCLIDGFCKVRRVDEAHKLLEQMVTQGIAPTVVTYNILLNSLCRADKLEDAFKLFRGMAQ 352

Query: 599 AGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLL 646
               P V T N+LL A     QL  A+ L   M+  G  P   TY  L
Sbjct: 353 RRCHPTVVTYNTLLRALCHHKQLDGAHRLYAEMIAKGCPPDAITYDTL 400



 Score =  115 bits (288), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 64/208 (30%), Positives = 104/208 (50%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           G+   E +Y T++    + +   A   + D+MVR  C PNVVTY  LI    ++  +  A
Sbjct: 214 GYVPTEVSYNTLIDGFCKKKDLVAAKDVFDKMVRSNCVPNVVTYTTLIDGLSKSGKVQAA 273

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
            +V   M   G  P+  TY  LID   K   +D A  + ++M   G++P   TY++++N 
Sbjct: 274 AEVLDGMVKKGVTPNVATYSCLIDGFCKVRRVDEAHKLLEQMVTQGIAPTVVTYNILLNS 333

Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPD 534
           L +A  L+ A +LF  M  + C P +VTYN ++      +    A +LY +M   G  PD
Sbjct: 334 LCRADKLEDAFKLFRGMAQRRCHPTVVTYNTLLRALCHHKQLDGAHRLYAEMIAKGCPPD 393

Query: 535 KVTYSIVMEVLGHCGYLDEAEAVFAEMR 562
            +TY  +   L   G + EA+ +  +M+
Sbjct: 394 AITYDTLAWGLTRAGKVHEAQELMEKMK 421



 Score = 95.9 bits (237), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 77/326 (23%), Positives = 129/326 (39%), Gaps = 48/326 (14%)

Query: 393 PNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDM 452
           P   T+N +   + +A  L +  +V++ M   G       Y  LI    K G  D A  +
Sbjct: 8   PGAATFNTVADGFAKAGRLEQVKEVYQGMVEAGYTLRASGYGILISCLCKVGNFDEAYKL 67

Query: 453 YKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQL---------------------FC-- 489
              M+          YS IIN L K   ++ A +L                      C  
Sbjct: 68  LHTMRLKRFKRKAIAYSTIINWLCKLNRVEEARELIEKMARYAPPDALTYGPIVERLCKT 127

Query: 490 -----------EMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTY 538
                      EM  +G  P+   YN +++   +    + A  L+  M      P+ VTY
Sbjct: 128 KRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLLFEKMVKQRINPNVVTY 187

Query: 539 SIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQ 598
           + ++  L     ++ A  +F EM  K +VP E  Y  L+D + K  ++  A + ++ M++
Sbjct: 188 NTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFCKKKDLVAAKDVFDKMVR 247

Query: 599 AGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYD 658
           +   PNV T  +L+    + G++  A  +L GM+  G+ P++ TY+ L+           
Sbjct: 248 SNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVATYSCLID---------- 297

Query: 659 MGFCHELMAVSGHPAHMFLLSMPSPG 684
            GFC          AH  L  M + G
Sbjct: 298 -GFCK---VRRVDEAHKLLEQMVTQG 319



 Score = 56.2 bits (134), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 41/159 (25%), Positives = 68/159 (42%), Gaps = 2/159 (1%)

Query: 497 IPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEA 556
           IP   T+N +    AKA   +   ++Y+ M  AG+      Y I++  L   G  DEA  
Sbjct: 7   IPGAATFNTVADGFAKAGRLEQVKEVYQGMVEAGYTLRASGYGILISCLCKVGNFDEAYK 66

Query: 557 VFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFL 616
           +   MR K +      Y  +++   K   V +A E  E M +    P+  T   ++    
Sbjct: 67  LLHTMRLKRFKRKAIAYSTIINWLCKLNRVEEARELIEKMARYA-PPDALTYGPIVERLC 125

Query: 617 RVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS-CCTEAR 654
           +  ++ DA   ++ M   G+KP    Y  +LS  C E +
Sbjct: 126 KTKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEK 164



 Score = 55.1 bits (131), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 33/102 (32%), Positives = 51/102 (50%)

Query: 362 TYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQM 421
           TY  ++  L RA +     KL   M +  C P VVTYN L+ +      L+ A  ++ +M
Sbjct: 326 TYNILLNSLCRADKLEDAFKLFRGMAQRRCHPTVVTYNTLLRALCHHKQLDGAHRLYAEM 385

Query: 422 QVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSP 463
              GC PD +TY TL     +AG +  A ++ +KM+    +P
Sbjct: 386 IAKGCPPDAITYDTLAWGLTRAGKVHEAQELMEKMKLTKRNP 427



 Score = 40.8 bits (94), Expect = 3.6,   Method: Compositional matrix adjust.
 Identities = 20/71 (28%), Positives = 33/71 (46%)

Query: 561 MRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQ 620
           M  +  +P    +  + D + KAG + +  E Y+ M++AG          L+S   +VG 
Sbjct: 1   MALRRVIPGAATFNTVADGFAKAGRLEQVKEVYQGMVEAGYTLRASGYGILISCLCKVGN 60

Query: 621 LSDAYHLLQGM 631
             +AY LL  M
Sbjct: 61  FDEAYKLLHTM 71


>gi|224096624|ref|XP_002310676.1| predicted protein [Populus trichocarpa]
 gi|222853579|gb|EEE91126.1| predicted protein [Populus trichocarpa]
          Length = 424

 Score =  150 bits (379), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 98/356 (27%), Positives = 174/356 (48%), Gaps = 11/356 (3%)

Query: 306 RQWKWGPLAEEALGNTNYSMD------AYQANQVLK---QLQDHTVALGFFNWLRRQAGF 356
           R+  +G L ++AL + N  +D        + N++L    +++ +   +  F  +  + G 
Sbjct: 14  RKGYFGNL-DDALASFNRMLDRNPQPPIIEFNRLLSSVVRMKKYETVVSLFKEMEFR-GI 71

Query: 357 KHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALD 416
           K++  T + ++              +  + ++ G +P+VV +  LI    R      A  
Sbjct: 72  KYNVCTLSILINCFCFLHHVDYGFSVFGKTLKRGFKPDVVIFTTLIDGVCRIGKTELAAG 131

Query: 417 VFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLG 476
           + K+M +VGC PD VT  +L+  +   G +D    ++  M + GL PD ++YS+ IN   
Sbjct: 132 LLKEMGLVGCVPDVVTCNSLMRGYCSQGKIDKVRKIFHLMVSKGLKPDVYSYSIFINGYC 191

Query: 477 KAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKV 536
           K   +  A +LF EM ++G +PN VTYN +I    +A   + A  L+R M   G  PD +
Sbjct: 192 KVEKIDEAMELFDEMSHRGVVPNAVTYNTLIKALCQALRPRDAQVLFRKMCACGLSPDIL 251

Query: 537 TYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAM 596
            YS +++     G LDE   +F EM+R+   PD  VY ++++   ++  V+ A E    +
Sbjct: 252 AYSTLLDGFCKQGNLDEMLVLFQEMQRRLVKPDLVVYTIIINGMCRSRKVKDAKEVLSRL 311

Query: 597 LQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTE 652
           +  GL+P+V T  +L+    R G + +A  L + M   G  P   +Y +LL  C +
Sbjct: 312 IVEGLKPDVHTYTALVDGLCREGSIIEALRLFRKMEEDGCMPGSCSYNVLLQGCLQ 367



 Score =  122 bits (306), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 86/310 (27%), Positives = 146/310 (47%), Gaps = 5/310 (1%)

Query: 340 HTVALGFFNW---LRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVV 396
           H V  GF  +   L+R  GFK D   +TT++  + R  +      LL +M   GC P+VV
Sbjct: 89  HHVDYGFSVFGKTLKR--GFKPDVVIFTTLIDGVCRIGKTELAAGLLKEMGLVGCVPDVV 146

Query: 397 TYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKM 456
           T N L+  Y     +++   +F  M   G +PD  +Y   I+ + K   +D AM+++ +M
Sbjct: 147 TCNSLMRGYCSQGKIDKVRKIFHLMVSKGLKPDVYSYSIFINGYCKVEKIDEAMELFDEM 206

Query: 457 QAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNY 516
              G+ P+  TY+ +I  L +A   + A  LF +M   G  P+++ Y+ ++    K  N 
Sbjct: 207 SHRGVVPNAVTYNTLIKALCQALRPRDAQVLFRKMCACGLSPDILAYSTLLDGFCKQGNL 266

Query: 517 QSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLL 576
              L L+++MQ    +PD V Y+I++  +     + +A+ V + +  +   PD   Y  L
Sbjct: 267 DEMLVLFQEMQRRLVKPDLVVYTIIINGMCRSRKVKDAKEVLSRLIVEGLKPDVHTYTAL 326

Query: 577 VDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGL 636
           VD   + G++ +A   +  M + G  P   + N LL   L+    S    L+  M + G 
Sbjct: 327 VDGLCREGSIIEALRLFRKMEEDGCMPGSCSYNVLLQGCLQHNDTSTVVQLIHEMADRGF 386

Query: 637 KPSLQTYTLL 646
                T T L
Sbjct: 387 YADAVTRTFL 396



 Score =  119 bits (299), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 76/285 (26%), Positives = 132/285 (46%), Gaps = 8/285 (2%)

Query: 376 FGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCT 435
             + N++LD+      QP ++ +NRL+ S  R       + +FK+M+  G + +  T   
Sbjct: 25  LASFNRMLDR----NPQPPIIEFNRLLSSVVRMKKYETVVSLFKEMEFRGIKYNVCTLSI 80

Query: 436 LIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQG 495
           LI+       +D    ++ K    G  PD   ++ +I+ + + G  + A  L  EM   G
Sbjct: 81  LINCFCFLHHVDYGFSVFGKTLKRGFKPDVVIFTTLIDGVCRIGKTELAAGLLKEMGLVG 140

Query: 496 CIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGY--LDE 553
           C+P++VT N ++             K++  M + G +PD  +YSI +   G+C    +DE
Sbjct: 141 CVPDVVTCNSLMRGYCSQGKIDKVRKIFHLMVSKGLKPDVYSYSIFIN--GYCKVEKIDE 198

Query: 554 AEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLS 613
           A  +F EM  +  VP+   Y  L+    +A   R A   +  M   GL P++   ++LL 
Sbjct: 199 AMELFDEMSHRGVVPNAVTYNTLIKALCQALRPRDAQVLFRKMCACGLSPDILAYSTLLD 258

Query: 614 AFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYD 658
            F + G L +   L Q M    +KP L  YT++++    +R   D
Sbjct: 259 GFCKQGNLDEMLVLFQEMQRRLVKPDLVVYTIIINGMCRSRKVKD 303



 Score = 91.3 bits (225), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 58/226 (25%), Positives = 102/226 (45%), Gaps = 35/226 (15%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           G K D ++Y+  +    +  +     +L D+M   G  PN VTYN LI +  +A    +A
Sbjct: 175 GLKPDVYSYSIFINGYCKVEKIDEAMELFDEMSHRGVVPNAVTYNTLIKALCQALRPRDA 234

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQ----------------- 457
             +F++M   G  PD + Y TL+D   K G LD  + ++++MQ                 
Sbjct: 235 QVLFRKMCACGLSPDILAYSTLLDGFCKQGNLDEMLVLFQEMQRRLVKPDLVVYTIIING 294

Query: 458 ------------------AAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPN 499
                               GL PD  TY+ +++ L + G +  A +LF +M   GC+P 
Sbjct: 295 MCRSRKVKDAKEVLSRLIVEGLKPDVHTYTALVDGLCREGSIIEALRLFRKMEEDGCMPG 354

Query: 500 LVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVL 545
             +YN+++    +  +  + ++L  +M + GF  D VT + + + L
Sbjct: 355 SCSYNVLLQGCLQHNDTSTVVQLIHEMADRGFYADAVTRTFLKDFL 400



 Score = 70.1 bits (170), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 49/227 (21%), Positives = 98/227 (43%)

Query: 444 GFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTY 503
           G LD A+  + +M      P    ++ +++ + +    +    LF EM  +G   N+ T 
Sbjct: 19  GNLDDALASFNRMLDRNPQPPIIEFNRLLSSVVRMKKYETVVSLFKEMEFRGIKYNVCTL 78

Query: 504 NIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRR 563
           +I+I       +      ++      GF+PD V ++ +++ +   G  + A  +  EM  
Sbjct: 79  SILINCFCFLHHVDYGFSVFGKTLKRGFKPDVVIFTTLIDGVCRIGKTELAAGLLKEMGL 138

Query: 564 KNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSD 623
              VPD      L+  +   G + K  + +  M+  GL+P+V + +  ++ + +V ++ +
Sbjct: 139 VGCVPDVVTCNSLMRGYCSQGKIDKVRKIFHLMVSKGLKPDVYSYSIFINGYCKVEKIDE 198

Query: 624 AYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGFCHELMAVSG 670
           A  L   M + G+ P+  TY  L+    +A  P D       M   G
Sbjct: 199 AMELFDEMSHRGVVPNAVTYNTLIKALCQALRPRDAQVLFRKMCACG 245


>gi|115436822|ref|NP_001043145.1| Os01g0505500 [Oryza sativa Japonica Group]
 gi|56201654|dbj|BAD73118.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
           sativa Japonica Group]
 gi|113532676|dbj|BAF05059.1| Os01g0505500 [Oryza sativa Japonica Group]
 gi|125570544|gb|EAZ12059.1| hypothetical protein OsJ_01942 [Oryza sativa Japonica Group]
          Length = 540

 Score =  150 bits (379), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 88/318 (27%), Positives = 165/318 (51%), Gaps = 3/318 (0%)

Query: 332 QVLKQLQDHTV-ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDG 390
           +VLK L +  + AL FF W  RQ GF++    +  ++  LG+ +QF  +  L++ M    
Sbjct: 125 EVLKNLSNAGILALAFFRWAERQQGFRYSAEGFHNLIEALGKIKQFRLVWSLVEAMRCRS 184

Query: 391 CQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAM 450
           C     T+  ++  Y RA  + EA++ F++M   G + D   Y  LIDI +K+  +  A 
Sbjct: 185 CLSKD-TFKIIVRRYARARKVKEAVETFEKMSSFGLKTDLSDYNWLIDILSKSKQVKKAH 243

Query: 451 DMYKKMQAAG-LSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIAL 509
            ++K+M+  G   PD  TY+V++   G    L     ++ EM++ G  P++V Y ++I+ 
Sbjct: 244 AIFKEMKRKGRFIPDLKTYTVLMEGWGHEKDLLMLKAVYQEMLDAGIKPDVVAYGMLISA 303

Query: 510 QAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPD 569
             K+     A+K++ +M+ +G  P    Y +++  LG    LDEA   F   +   +  +
Sbjct: 304 FCKSGKCDEAIKVFHEMEESGCMPSPHVYCMLINGLGSMERLDEALKYFQLSKESGFPME 363

Query: 570 EPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQ 629
            P    ++  + +A     A++  + M ++G+ PN  T + +L+  ++  ++ +AY+L Q
Sbjct: 364 VPTCNAVIGAYCRALEFHHAFKMVDEMRKSGIGPNTRTYDIILNHLIKSEKIEEAYNLFQ 423

Query: 630 GMLNLGLKPSLQTYTLLL 647
            M   G +P L TYT+++
Sbjct: 424 RMERDGCEPELNTYTMMV 441



 Score =  123 bits (308), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 84/350 (24%), Positives = 165/350 (47%), Gaps = 8/350 (2%)

Query: 289 RHFASTGNVVESVSRILRQWKWGPLAEEALGNTNYSMDAYQANQVLKQLQDHTVALGFFN 348
           R +A    V E+V    +   +G   +  L + N+ +D    ++ +K+      A   F 
Sbjct: 196 RRYARARKVKEAVETFEKMSSFG--LKTDLSDYNWLIDILSKSKQVKK------AHAIFK 247

Query: 349 WLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRA 408
            ++R+  F  D  TYT ++   G  +    +  +  +M+  G +P+VV Y  LI ++ ++
Sbjct: 248 EMKRKGRFIPDLKTYTVLMEGWGHEKDLLMLKAVYQEMLDAGIKPDVVAYGMLISAFCKS 307

Query: 409 NYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTY 468
              +EA+ VF +M+  GC P    YC LI+       LD A+  ++  + +G   +  T 
Sbjct: 308 GKCDEAIKVFHEMEESGCMPSPHVYCMLINGLGSMERLDEALKYFQLSKESGFPMEVPTC 367

Query: 469 SVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQN 528
           + +I    +A     A ++  EM   G  PN  TY+I++    K+   + A  L++ M+ 
Sbjct: 368 NAVIGAYCRALEFHHAFKMVDEMRKSGIGPNTRTYDIILNHLIKSEKIEEAYNLFQRMER 427

Query: 529 AGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRK 588
            G EP+  TY++++ +      +D A  V+ +M+ K  +P   ++  L++       + +
Sbjct: 428 DGCEPELNTYTMMVGMFCSNERVDMALKVWKQMKEKGVLPCMHMFSALINGLCFENRLEE 487

Query: 589 AWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKP 638
           A  +++ ML  G+RP     ++L  A +  G+++ A  + Q +  L   P
Sbjct: 488 ACVYFQEMLDKGIRPPGQLFSNLKEALVEGGRITLAQEVTQRLEMLRRTP 537



 Score = 90.1 bits (222), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 56/207 (27%), Positives = 102/207 (49%), Gaps = 3/207 (1%)

Query: 443 AGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVT 502
           AG L +A   + + Q  G       +  +I  LGK    +    L   M  + C+    T
Sbjct: 133 AGILALAFFRWAERQQ-GFRYSAEGFHNLIEALGKIKQFRLVWSLVEAMRCRSCLSK-DT 190

Query: 503 YNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMR 562
           + I++   A+AR  + A++ +  M + G + D   Y+ ++++L     + +A A+F EM+
Sbjct: 191 FKIIVRRYARARKVKEAVETFEKMSSFGLKTDLSDYNWLIDILSKSKQVKKAHAIFKEMK 250

Query: 563 RK-NWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQL 621
           RK  ++PD   Y +L++ WG   ++      Y+ ML AG++P+V     L+SAF + G+ 
Sbjct: 251 RKGRFIPDLKTYTVLMEGWGHEKDLLMLKAVYQEMLDAGIKPDVVAYGMLISAFCKSGKC 310

Query: 622 SDAYHLLQGMLNLGLKPSLQTYTLLLS 648
            +A  +   M   G  PS   Y +L++
Sbjct: 311 DEAIKVFHEMEESGCMPSPHVYCMLIN 337


>gi|224130828|ref|XP_002328386.1| predicted protein [Populus trichocarpa]
 gi|222838101|gb|EEE76466.1| predicted protein [Populus trichocarpa]
          Length = 617

 Score =  150 bits (379), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 86/286 (30%), Positives = 144/286 (50%)

Query: 362 TYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQM 421
           TY T++  L + R      + L +MV  G  P+VVTYN ++H +     LNEA  +FK+M
Sbjct: 238 TYNTIIDSLCKDRLVNEAVEFLSEMVDRGIPPDVVTYNTILHGFCSLGQLNEATRLFKEM 297

Query: 422 QVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHL 481
                 PD VT+  L+D   K G +  A  + + M   G  P+ +TY+ +++       +
Sbjct: 298 VGRNVMPDTVTFNILVDGLCKEGMVSEARCVSETMTEKGAEPNAYTYNALMDGYCLHNQM 357

Query: 482 QAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIV 541
             A ++   M+ +GC PNL +YNI+I    K++    A +L  +M      PD VTYS +
Sbjct: 358 DEAIKVLGIMIGKGCAPNLSSYNILINGYCKSKRMNEAKRLLSEMSEKNLTPDTVTYSTL 417

Query: 542 MEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGL 601
           M+ L   G   EA  +F EM     +PD   Y +L+D + K G++ +A +  + M +  +
Sbjct: 418 MQGLCQVGRPREALNLFKEMCSSGLLPDLMAYSILLDGFCKHGHLDEALKLLKEMHERRI 477

Query: 602 RPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
           +PN+     L+      G+L  A  L   +   G++P + TY +++
Sbjct: 478 KPNIILYTILIRGMFIAGKLEVAKELFSKLSADGIRPDIWTYNVMI 523



 Score =  146 bits (368), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 87/286 (30%), Positives = 151/286 (52%)

Query: 363 YTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQ 422
           +   +G + + +Q+ +   L +QM   G   NV + N LI+   R ++++ A+ V  +M 
Sbjct: 99  FGKFLGSIAKKKQYSSAVSLCNQMDLFGVTHNVYSLNVLINCLCRLSHVDFAVSVMGKMF 158

Query: 423 VVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQ 482
            +G +PD +T+ TLI+     G +  A+ ++ +M  +G  P+  +Y+ +IN L K G+  
Sbjct: 159 KLGIQPDAITFNTLINGLCNEGKIKEAVGLFNEMVWSGHEPNVISYNTVINGLCKNGNTI 218

Query: 483 AAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVM 542
            A ++F +M      PN+VTYN +I    K R    A++   +M + G  PD VTY+ ++
Sbjct: 219 MAVRVFRKMEQNRGKPNVVTYNTIIDSLCKDRLVNEAVEFLSEMVDRGIPPDVVTYNTIL 278

Query: 543 EVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLR 602
                 G L+EA  +F EM  +N +PD   + +LVD   K G V +A    E M + G  
Sbjct: 279 HGFCSLGQLNEATRLFKEMVGRNVMPDTVTFNILVDGLCKEGMVSEARCVSETMTEKGAE 338

Query: 603 PNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
           PN  T N+L+  +    Q+ +A  +L  M+  G  P+L +Y +L++
Sbjct: 339 PNAYTYNALMDGYCLHNQMDEAIKVLGIMIGKGCAPNLSSYNILIN 384



 Score =  137 bits (346), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 87/297 (29%), Positives = 153/297 (51%), Gaps = 4/297 (1%)

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
           + G + D  T+ T++  L    +      L ++MV  G +PNV++YN +I+   +     
Sbjct: 159 KLGIQPDAITFNTLINGLCNEGKIKEAVGLFNEMVWSGHEPNVISYNTVINGLCKNGNTI 218

Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
            A+ VF++M+    +P+ VTY T+ID   K   ++ A++   +M   G+ PD  TY+ I+
Sbjct: 219 MAVRVFRKMEQNRGKPNVVTYNTIIDSLCKDRLVNEAVEFLSEMVDRGIPPDVVTYNTIL 278

Query: 473 NCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFE 532
           +     G L  A +LF EMV +  +P+ VT+NI++    K      A  +   M   G E
Sbjct: 279 HGFCSLGQLNEATRLFKEMVGRNVMPDTVTFNILVDGLCKEGMVSEARCVSETMTEKGAE 338

Query: 533 PDKVTYSIVMEVLGHCGY--LDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAW 590
           P+  TY+ +M+  G+C +  +DEA  V   M  K   P+   Y +L++ + K+  + +A 
Sbjct: 339 PNAYTYNALMD--GYCLHNQMDEAIKVLGIMIGKGCAPNLSSYNILINGYCKSKRMNEAK 396

Query: 591 EWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
                M +  L P+  T ++L+    +VG+  +A +L + M + GL P L  Y++LL
Sbjct: 397 RLLSEMSEKNLTPDTVTYSTLMQGLCQVGRPREALNLFKEMCSSGLLPDLMAYSILL 453



 Score =  134 bits (338), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 106/434 (24%), Positives = 191/434 (44%), Gaps = 10/434 (2%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           G  H+ ++   ++  L R         ++ +M + G QP+ +T+N LI+       + EA
Sbjct: 126 GVTHNVYSLNVLINCLCRLSHVDFAVSVMGKMFKLGIQPDAITFNTLINGLCNEGKIKEA 185

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
           + +F +M   G EP+ ++Y T+I+   K G   +A+ +++KM+     P+  TY+ II+ 
Sbjct: 186 VGLFNEMVWSGHEPNVISYNTVINGLCKNGNTIMAVRVFRKMEQNRGKPNVVTYNTIIDS 245

Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPD 534
           L K   +  A +   EMV++G  P++VTYN ++           A +L+++M      PD
Sbjct: 246 LCKDRLVNEAVEFLSEMVDRGIPPDVVTYNTILHGFCSLGQLNEATRLFKEMVGRNVMPD 305

Query: 535 KVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYE 594
            VT++I+++ L   G + EA  V   M  K   P+   Y  L+D +     + +A +   
Sbjct: 306 TVTFNILVDGLCKEGMVSEARCVSETMTEKGAEPNAYTYNALMDGYCLHNQMDEAIKVLG 365

Query: 595 AMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEAR 654
            M+  G  PN+ + N L++ + +  ++++A  LL  M    L P   TY+ L+    +  
Sbjct: 366 IMIGKGCAPNLSSYNILINGYCKSKRMNEAKRLLSEMSEKNLTPDTVTYSTLMQGLCQVG 425

Query: 655 SPYDMGFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRESKRGLVD 714
            P +     + M  SG    +   S+   G       D     L+ MH    +    L  
Sbjct: 426 RPREALNLFKEMCSSGLLPDLMAYSILLDGFCKHGHLDEALKLLKEMHERRIKPNIILYT 485

Query: 715 AVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAVKEKGMSYWLINLHVMSDGTAVIALSRTL 774
            ++  +  +G  E A  ++   +   + PD         W  N  VM  G     LS   
Sbjct: 486 ILIRGMFIAGKLEVAKELFSKLSADGIRPDI--------WTYN--VMIKGLLKEGLSDEA 535

Query: 775 AWFRKQMLISGVGP 788
             F ++M   G  P
Sbjct: 536 YEFFRKMEDDGFLP 549



 Score =  128 bits (322), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 79/289 (27%), Positives = 142/289 (49%)

Query: 359 DEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVF 418
           D  T+  +V  L +         + + M   G +PN  TYN L+  Y   N ++EA+ V 
Sbjct: 305 DTVTFNILVDGLCKEGMVSEARCVSETMTEKGAEPNAYTYNALMDGYCLHNQMDEAIKVL 364

Query: 419 KQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKA 478
             M   GC P+  +Y  LI+ + K+  ++ A  +  +M    L+PDT TYS ++  L + 
Sbjct: 365 GIMIGKGCAPNLSSYNILINGYCKSKRMNEAKRLLSEMSEKNLTPDTVTYSTLMQGLCQV 424

Query: 479 GHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTY 538
           G  + A  LF EM + G +P+L+ Y+I++    K  +   ALKL ++M     +P+ + Y
Sbjct: 425 GRPREALNLFKEMCSSGLLPDLMAYSILLDGFCKHGHLDEALKLLKEMHERRIKPNIILY 484

Query: 539 SIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQ 598
           +I++  +   G L+ A+ +F+++      PD   Y +++    K G   +A+E++  M  
Sbjct: 485 TILIRGMFIAGKLEVAKELFSKLSADGIRPDIWTYNVMIKGLLKEGLSDEAYEFFRKMED 544

Query: 599 AGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
            G  P+  + N ++  FL+    S A  L+  M+         T+ +LL
Sbjct: 545 DGFLPDSCSYNVIIQGFLQNQDSSTAIQLIDEMVGKRFSADSSTFQMLL 593



 Score =  120 bits (300), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 73/260 (28%), Positives = 129/260 (49%)

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
           + G + + +TY  ++       Q     K+L  M+  GC PN+ +YN LI+ Y ++  +N
Sbjct: 334 EKGAEPNAYTYNALMDGYCLHNQMDEAIKVLGIMIGKGCAPNLSSYNILINGYCKSKRMN 393

Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
           EA  +  +M      PD VTY TL+    + G    A++++K+M ++GL PD   YS+++
Sbjct: 394 EAKRLLSEMSEKNLTPDTVTYSTLMQGLCQVGRPREALNLFKEMCSSGLLPDLMAYSILL 453

Query: 473 NCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFE 532
           +   K GHL  A +L  EM  +   PN++ Y I+I     A   + A +L+  +   G  
Sbjct: 454 DGFCKHGHLDEALKLLKEMHERRIKPNIILYTILIRGMFIAGKLEVAKELFSKLSADGIR 513

Query: 533 PDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEW 592
           PD  TY+++++ L   G  DEA   F +M    ++PD   Y +++  + +  +   A + 
Sbjct: 514 PDIWTYNVMIKGLLKEGLSDEAYEFFRKMEDDGFLPDSCSYNVIIQGFLQNQDSSTAIQL 573

Query: 593 YEAMLQAGLRPNVPTCNSLL 612
            + M+      +  T   LL
Sbjct: 574 IDEMVGKRFSADSSTFQMLL 593



 Score =  103 bits (257), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 79/336 (23%), Positives = 150/336 (44%)

Query: 411 LNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSV 470
           +++AL  F +M  +   P  V +   +   AK      A+ +  +M   G++ + ++ +V
Sbjct: 77  IDDALTSFYRMVRMNPRPSVVEFGKFLGSIAKKKQYSSAVSLCNQMDLFGVTHNVYSLNV 136

Query: 471 IINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAG 530
           +INCL +  H+  A  +  +M   G  P+ +T+N +I         + A+ L+ +M  +G
Sbjct: 137 LINCLCRLSHVDFAVSVMGKMFKLGIQPDAITFNTLINGLCNEGKIKEAVGLFNEMVWSG 196

Query: 531 FEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAW 590
            EP+ ++Y+ V+  L   G    A  VF +M +    P+   Y  ++D   K   V +A 
Sbjct: 197 HEPNVISYNTVINGLCKNGNTIMAVRVFRKMEQNRGKPNVVTYNTIIDSLCKDRLVNEAV 256

Query: 591 EWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCC 650
           E+   M+  G+ P+V T N++L  F  +GQL++A  L + M+   + P   T+ +L+   
Sbjct: 257 EFLSEMVDRGIPPDVVTYNTILHGFCSLGQLNEATRLFKEMVGRNVMPDTVTFNILVDGL 316

Query: 651 TEARSPYDMGFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRESKR 710
            +     +     E M   G   + +  +    G    N  D     L +M  +      
Sbjct: 317 CKEGMVSEARCVSETMTEKGAEPNAYTYNALMDGYCLHNQMDEAIKVLGIMIGKGCAPNL 376

Query: 711 GLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAV 746
              + +++   KS    EA  +    ++KN+ PD V
Sbjct: 377 SSYNILINGYCKSKRMNEAKRLLSEMSEKNLTPDTV 412



 Score = 97.8 bits (242), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 58/192 (30%), Positives = 109/192 (56%), Gaps = 6/192 (3%)

Query: 359 DEHTYTTMVGIL---GRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEAL 415
           D  TY+T++  L   GR R+  A+N L  +M   G  P+++ Y+ L+  + +  +L+EAL
Sbjct: 410 DTVTYSTLMQGLCQVGRPRE--ALN-LFKEMCSSGLLPDLMAYSILLDGFCKHGHLDEAL 466

Query: 416 DVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCL 475
            + K+M     +P+ + Y  LI     AG L+VA +++ K+ A G+ PD +TY+V+I  L
Sbjct: 467 KLLKEMHERRIKPNIILYTILIRGMFIAGKLEVAKELFSKLSADGIRPDIWTYNVMIKGL 526

Query: 476 GKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDK 535
            K G    A++ F +M + G +P+  +YN++I    + ++  +A++L  +M    F  D 
Sbjct: 527 LKEGLSDEAYEFFRKMEDDGFLPDSCSYNVIIQGFLQNQDSSTAIQLIDEMVGKRFSADS 586

Query: 536 VTYSIVMEVLGH 547
            T+ +++++  H
Sbjct: 587 STFQMLLDLESH 598


>gi|224713520|gb|ACN62067.1| PPR-816 [Zea mays]
          Length = 816

 Score =  150 bits (379), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 89/295 (30%), Positives = 148/295 (50%)

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
           Q G   D  TY+++V  L +AR        L QMV  G  P+  TYN LI+ Y       
Sbjct: 249 QRGIPPDLVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPDNWTYNNLIYGYSSTGQWK 308

Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
           EA+ VFK+M+     PD V   TL+    K G +  A D++  M   G +PD F+Y++++
Sbjct: 309 EAVRVFKEMRRQSILPDVVALNTLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYTIML 368

Query: 473 NCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFE 532
           N     G L     LF  M+  G  P + T+N++I   A       A+ ++ +M++ G +
Sbjct: 369 NGYATKGCLVDMTDLFDLMLGDGIAPVICTFNVLIKAYANCGMLDKAMIIFNEMRDHGVK 428

Query: 533 PDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEW 592
           P  VTY  V+  L   G +D+A   F +M  +  VPD+  Y  L+  +   G++ KA E 
Sbjct: 429 PHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQGVVPDKYAYHCLIQGFCTHGSLLKAKEL 488

Query: 593 YEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
              ++  G+R ++    S+++   ++G++ DA ++    +N+GL P    Y +L+
Sbjct: 489 ISEIMNNGMRLDIVFFGSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLM 543



 Score =  147 bits (372), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 130/492 (26%), Positives = 230/492 (46%), Gaps = 40/492 (8%)

Query: 342 VALGFFNWLRRQAGFKHDEHTYTTMV-GILGRARQFGAINKLLDQMVRDGCQPNVVTYNR 400
           +AL FF  L R  G + D    + ++ G     R   A++ LL +    GC P+V +YN 
Sbjct: 131 LALAFFGQLLR-TGLRVDAIIASHLLKGFCEAKRTDEALDILLHRTPELGCVPDVFSYNI 189

Query: 401 LIHSYGRANYLNEALDVFKQMQVVG--CEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQA 458
           L+ S        +A D+ + M   G  C PD V Y T+ID   K G ++ A D++K+M  
Sbjct: 190 LLKSLCNQGKSGQADDLLRMMAEGGTVCSPDVVAYNTVIDGFFKEGDVNKACDLFKEMVQ 249

Query: 459 AGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQS 518
            G+ PD  TYS +++ L KA  +  A     +MVN+G +P+  TYN +I   +    ++ 
Sbjct: 250 RGIPPDLVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPDNWTYNNLIYGYSSTGQWKE 309

Query: 519 ALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVD 578
           A++++++M+     PD V  + +M  L   G + EA  VF  M  K   PD   Y ++++
Sbjct: 310 AVRVFKEMRRQSILPDVVALNTLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYTIMLN 369

Query: 579 LWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKP 638
            +   G +    + ++ ML  G+ P + T N L+ A+   G L  A  +   M + G+KP
Sbjct: 370 GYATKGCLVDMTDLFDLMLGDGIAPVICTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKP 429

Query: 639 SLQTY-TLLLSCCTEARSPYDMGFCHELM---AVSGHPAHMFLLSMPSPGPDGQNVRDHV 694
            + TY T++ + C   +    M   ++++    V    A+  L+         Q    H 
Sbjct: 430 HVVTYMTVIAALCRIGKMDDAMEKFNQMIDQGVVPDKYAYHCLI---------QGFCTH- 479

Query: 695 GSFLEMMHSEDRESKRGLVDAVVDF------LHKSGLKEEAGSVWEVAAQKNVYPDAVKE 748
           GS L+           G+   +V F      L K G   +A +++++     ++PDAV  
Sbjct: 480 GSLLKAKELISEIMNNGMRLDIVFFGSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVV- 538

Query: 749 KGMSYWLINLHVMSDGTAVIA-LSRTLAWFRKQMLISGVGPSRI---DIVTGWGRRSRV- 803
                     +++ DG  ++  + + L  F   M+ +G+ P+ +    +V G+ +  R+ 
Sbjct: 539 ---------YNMLMDGYCLVGKMEKALRVF-DAMVSAGIEPNVVGYGTLVNGYCKIGRID 588

Query: 804 TGTSLVRQAVQE 815
            G SL R+ +Q+
Sbjct: 589 EGLSLFREMLQK 600



 Score =  140 bits (353), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 85/311 (27%), Positives = 151/311 (48%), Gaps = 1/311 (0%)

Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLI 402
           A+  F  +RRQ+    D     T++G L +  +      + D M   G  P+V +Y  ++
Sbjct: 310 AVRVFKEMRRQSILP-DVVALNTLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYTIML 368

Query: 403 HSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLS 462
           + Y     L +  D+F  M   G  P   T+  LI  +A  G LD AM ++ +M+  G+ 
Sbjct: 369 NGYATKGCLVDMTDLFDLMLGDGIAPVICTFNVLIKAYANCGMLDKAMIIFNEMRDHGVK 428

Query: 463 PDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKL 522
           P   TY  +I  L + G +  A + F +M++QG +P+   Y+ +I       +   A +L
Sbjct: 429 PHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQGVVPDKYAYHCLIQGFCTHGSLLKAKEL 488

Query: 523 YRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGK 582
             ++ N G   D V +  ++  L   G + +A+ +F         PD  VY +L+D +  
Sbjct: 489 ISEIMNNGMRLDIVFFGSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCL 548

Query: 583 AGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQT 642
            G + KA   ++AM+ AG+ PNV    +L++ + ++G++ +   L + ML  G+KPS   
Sbjct: 549 VGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTIL 608

Query: 643 YTLLLSCCTEA 653
           Y +++    EA
Sbjct: 609 YNIIIDGLFEA 619



 Score =  130 bits (327), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 104/396 (26%), Positives = 176/396 (44%), Gaps = 18/396 (4%)

Query: 359 DEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVF 418
           D  +YT M+           +  L D M+ DG  P + T+N LI +Y     L++A+ +F
Sbjct: 360 DVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPVICTFNVLIKAYANCGMLDKAMIIF 419

Query: 419 KQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKA 478
            +M+  G +P  VTY T+I    + G +D AM+ + +M   G+ PD + Y  +I      
Sbjct: 420 NEMRDHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQGVVPDKYAYHCLIQGFCTH 479

Query: 479 GHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTY 538
           G L  A +L  E++N G   ++V +  +I    K      A  ++    N G  PD V Y
Sbjct: 480 GSLLKAKELISEIMNNGMRLDIVFFGSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVY 539

Query: 539 SIVMEVLGHC--GYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAM 596
           +++M+  G+C  G +++A  VF  M      P+   YG LV+ + K G + +    +  M
Sbjct: 540 NMLMD--GYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREM 597

Query: 597 LQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSP 656
           LQ G++P+    N ++      G+   A      M   G+  +  TY+++L    + R  
Sbjct: 598 LQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSIVLRGLFKNRCF 657

Query: 657 YDMGFC-HELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRESKRGLVDA 715
            +  F   EL A++     + L +M +     + V +    F  +       S+ GLV  
Sbjct: 658 DEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASI-------SRSGLVPC 710

Query: 716 VVDF------LHKSGLKEEAGSVWEVAAQKNVYPDA 745
            V +      L K GL EEA  ++         PD+
Sbjct: 711 AVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPDS 746



 Score =  117 bits (294), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 71/270 (26%), Positives = 132/270 (48%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           G + D   + +++  L +  +      + D  V  G  P+ V YN L+  Y     + +A
Sbjct: 496 GMRLDIVFFGSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKA 555

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
           L VF  M   G EP+ V Y TL++ + K G +D  + ++++M   G+ P T  Y++II+ 
Sbjct: 556 LRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDG 615

Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPD 534
           L +AG    A   F EM   G   N  TY+I++    K R +  A+ L+++++    + D
Sbjct: 616 LFEAGRTVPAKVKFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKID 675

Query: 535 KVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYE 594
            +T + ++  +     ++EA+ +FA + R   VP    Y +++    K G V +A + + 
Sbjct: 676 IITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCAVTYSIMITNLIKEGLVEEAEDMFS 735

Query: 595 AMLQAGLRPNVPTCNSLLSAFLRVGQLSDA 624
           +M  AG  P+    N ++   L+  ++  A
Sbjct: 736 SMQNAGCEPDSRLLNHVVRELLKKNEIVRA 765



 Score =  105 bits (261), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 77/281 (27%), Positives = 126/281 (44%), Gaps = 3/281 (1%)

Query: 393 PNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMD- 451
           P   TY  L+    RA+    AL  F Q+   G   D +    L+    +A   D A+D 
Sbjct: 111 PTSYTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDAIIASHLLKGFCEAKRTDEALDI 170

Query: 452 MYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQG--CIPNLVTYNIMIAL 509
           +  +    G  PD F+Y++++  L   G    A  L   M   G  C P++V YN +I  
Sbjct: 171 LLHRTPELGCVPDVFSYNILLKSLCNQGKSGQADDLLRMMAEGGTVCSPDVVAYNTVIDG 230

Query: 510 QAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPD 569
             K  +   A  L+++M   G  PD VTYS V+  L     +D+AEA   +M  K  +PD
Sbjct: 231 FFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPD 290

Query: 570 EPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQ 629
              Y  L+  +   G  ++A   ++ M +  + P+V   N+L+ +  + G++ +A  +  
Sbjct: 291 NWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVALNTLMGSLCKYGKIKEARDVFD 350

Query: 630 GMLNLGLKPSLQTYTLLLSCCTEARSPYDMGFCHELMAVSG 670
            M   G  P + +YT++L+         DM    +LM   G
Sbjct: 351 TMAMKGQNPDVFSYTIMLNGYATKGCLVDMTDLFDLMLGDG 391



 Score =  100 bits (249), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 69/306 (22%), Positives = 142/306 (46%), Gaps = 1/306 (0%)

Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLI 402
           A+  FN +R   G K    TY T++  L R  +     +  +QM+  G  P+   Y+ LI
Sbjct: 415 AMIIFNEMRDH-GVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQGVVPDKYAYHCLI 473

Query: 403 HSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLS 462
             +     L +A ++  ++   G   D V + ++I+   K G +  A +++      GL 
Sbjct: 474 QGFCTHGSLLKAKELISEIMNNGMRLDIVFFGSIINNLCKLGRVMDAQNIFDLTVNVGLH 533

Query: 463 PDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKL 522
           PD   Y+++++     G ++ A ++F  MV+ G  PN+V Y  ++    K       L L
Sbjct: 534 PDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSL 593

Query: 523 YRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGK 582
           +R+M   G +P  + Y+I+++ L   G    A+  F EM       ++  Y +++    K
Sbjct: 594 FREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSIVLRGLFK 653

Query: 583 AGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQT 642
                +A   ++ +    ++ ++ T N++++   +  ++ +A  L   +   GL P   T
Sbjct: 654 NRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCAVT 713

Query: 643 YTLLLS 648
           Y+++++
Sbjct: 714 YSIMIT 719



 Score = 90.9 bits (224), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 64/250 (25%), Positives = 110/250 (44%), Gaps = 35/250 (14%)

Query: 381 KLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLID-- 438
           ++ D MV  G +PNVV Y  L++ Y +   ++E L +F++M   G +P  + Y  +ID  
Sbjct: 557 RVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGL 616

Query: 439 ------IHAKAGF---------------------------LDVAMDMYKKMQAAGLSPDT 465
                 + AK  F                            D A+ ++K+++A  +  D 
Sbjct: 617 FEAGRTVPAKVKFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDI 676

Query: 466 FTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRD 525
            T + +I  + +   ++ A  LF  +   G +P  VTY+IMI    K    + A  ++  
Sbjct: 677 ITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCAVTYSIMITNLIKEGLVEEAEDMFSS 736

Query: 526 MQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGN 585
           MQNAG EPD    + V+  L     +  A A  +++  +N+  +     LLVDL+   G 
Sbjct: 737 MQNAGCEPDSRLLNHVVRELLKKNEIVRAGAYLSKIDERNFSLEHLTAMLLVDLFSSKGT 796

Query: 586 VRKAWEWYEA 595
            R+   +  A
Sbjct: 797 CREQIRFLPA 806



 Score = 60.5 bits (145), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 40/148 (27%), Positives = 71/148 (47%), Gaps = 2/148 (1%)

Query: 353 QAGFKHDEHTYTTMV-GILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           Q G K     Y  ++ G+    R   A  K   +M   G   N  TY+ ++    +    
Sbjct: 599 QKGIKPSTILYNIIIDGLFEAGRTVPAKVKF-HEMTESGIAMNKCTYSIVLRGLFKNRCF 657

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
           +EA+ +FK+++ +  + D +T  T+I    +   ++ A D++  +  +GL P   TYS++
Sbjct: 658 DEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCAVTYSIM 717

Query: 472 INCLGKAGHLQAAHQLFCEMVNQGCIPN 499
           I  L K G ++ A  +F  M N GC P+
Sbjct: 718 ITNLIKEGLVEEAEDMFSSMQNAGCEPD 745



 Score = 47.4 bits (111), Expect = 0.039,   Method: Compositional matrix adjust.
 Identities = 29/87 (33%), Positives = 41/87 (47%), Gaps = 1/87 (1%)

Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLI 402
           A+  F  LR     K D  T  TM+  + + R+      L   + R G  P  VTY+ +I
Sbjct: 660 AIFLFKELR-AMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCAVTYSIMI 718

Query: 403 HSYGRANYLNEALDVFKQMQVVGCEPD 429
            +  +   + EA D+F  MQ  GCEPD
Sbjct: 719 TNLIKEGLVEEAEDMFSSMQNAGCEPD 745


>gi|296089773|emb|CBI39592.3| unnamed protein product [Vitis vinifera]
          Length = 577

 Score =  150 bits (379), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 98/297 (32%), Positives = 146/297 (49%), Gaps = 7/297 (2%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           GF     TY T++    +A +    + LL +MV     PN +T+N LI  + R   +  A
Sbjct: 259 GFSPSVITYNTIIDGYCKAGKMFKADALLKEMVAKRIHPNEITFNILIDGFCRDENVTAA 318

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
             VF++MQ  G +P+ VTY +LI+     G LD A+ +  KM   GL P+  TY+ +IN 
Sbjct: 319 KKVFEEMQRQGLQPNVVTYNSLINGLCSNGKLDEALGLQDKMSGMGLKPNVVTYNALING 378

Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPD 534
             K   L+ A ++  ++  +G  PN++T+N +I    KA     A  L   M + G  P+
Sbjct: 379 FCKKKMLKEAREMLDDIGKRGLAPNVITFNTLIDAYGKAGRMDDAFLLRSMMLDTGVCPN 438

Query: 535 KVTYSIVMEVLGHC--GYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEW 592
             TY+ +  ++G C  G + EA  +  EM       D   Y +LVD   K G  RKA   
Sbjct: 439 VSTYNCL--IVGFCREGNVKEARKLAKEMEGNGLKADLVTYNILVDALCKKGETRKAVRL 496

Query: 593 YEAML---QAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLL 646
            + M    + G R N+ T N L+  F   G+L +A  LL  ML  GL P+  TY +L
Sbjct: 497 LDEMTLMEKKGRRANIVTYNVLIKGFCNKGKLEEANRLLNEMLEKGLIPNRTTYDIL 553



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 102/374 (27%), Positives = 176/374 (47%), Gaps = 3/374 (0%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           GF+    +   M+  L +  + G +  +  +M+R     NVVT++ +I+   +     +A
Sbjct: 189 GFRLSALSCNPMLVSLVKEGRIGVVESVYKEMIRRRIGVNVVTFDVVINGLCKVGKFQKA 248

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
            DV + M+  G  P  +TY T+ID + KAG +  A  + K+M A  + P+  T++++I+ 
Sbjct: 249 GDVVEDMKAWGFSPSVITYNTIIDGYCKAGKMFKADALLKEMVAKRIHPNEITFNILIDG 308

Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPD 534
             +  ++ AA ++F EM  QG  PN+VTYN +I           AL L   M   G +P+
Sbjct: 309 FCRDENVTAAKKVFEEMQRQGLQPNVVTYNSLINGLCSNGKLDEALGLQDKMSGMGLKPN 368

Query: 535 KVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYE 594
            VTY+ ++        L EA  +  ++ ++   P+   +  L+D +GKAG +  A+    
Sbjct: 369 VVTYNALINGFCKKKMLKEAREMLDDIGKRGLAPNVITFNTLIDAYGKAGRMDDAFLLRS 428

Query: 595 AMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL-SCCTEA 653
            ML  G+ PNV T N L+  F R G + +A  L + M   GLK  L TY +L+ + C + 
Sbjct: 429 MMLDTGVCPNVSTYNCLIVGFCREGNVKEARKLAKEMEGNGLKADLVTYNILVDALCKKG 488

Query: 654 RSPYDMGFCHE--LMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRESKRG 711
            +   +    E  LM   G  A++   ++   G   +   +     L  M  +     R 
Sbjct: 489 ETRKAVRLLDEMTLMEKKGRRANIVTYNVLIKGFCNKGKLEEANRLLNEMLEKGLIPNRT 548

Query: 712 LVDAVVDFLHKSGL 725
             D + D + + G 
Sbjct: 549 TYDILRDEMMEKGF 562



 Score =  126 bits (317), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 102/413 (24%), Positives = 190/413 (46%), Gaps = 53/413 (12%)

Query: 266 CVSERFSKPSREMKIPAGLAPFS--RHFASTGNV----VESVSRILRQWKWGPLAEEALG 319
           C+S RF  PS + K+     PFS      +T N       ++S+++ +  W  L +  + 
Sbjct: 13  CLSTRF--PSLDPKLNNTKTPFSSPNSTYTTPNSHTFDTPTISQLIAKQHWSKL-KTIVK 69

Query: 320 NTNYSMDAYQANQVLKQLQDHT----VALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQ 375
            TN S        +L+ L +      + L +F W +++ G  H+   +  ++ +L  A+ 
Sbjct: 70  ETNPS-------SLLQHLFNSEAQPDLILCYFKWTQKEFGAIHNVEQFCRLLHLLANAKN 122

Query: 376 FGAINKLLDQMVRDGCQPNVVTYNRL--IHSYGRANYLNEALDVFKQMQVVGCEPDRVTY 433
           +  I  LLD   ++    N   ++ L  + S+G AN                     +  
Sbjct: 123 YNKIRALLDSFAKNAHYSNSTIFHSLSVLGSWGCAN--------------------SIIV 162

Query: 434 CTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVN 493
             L+  + K G +D+A++ + +    G      + + ++  L K G +     ++ EM+ 
Sbjct: 163 DMLVWAYVKNGEMDLALEGFDRAGDYGFRLSALSCNPMLVSLVKEGRIGVVESVYKEMIR 222

Query: 494 QGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDE 553
           +    N+VT++++I    K   +Q A  +  DM+  GF P  +TY+ +++     G + +
Sbjct: 223 RRIGVNVVTFDVVINGLCKVGKFQKAGDVVEDMKAWGFSPSVITYNTIIDGYCKAGKMFK 282

Query: 554 AEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLS 613
           A+A+  EM  K   P+E  + +L+D + +  NV  A + +E M + GL+PNV T NSL++
Sbjct: 283 ADALLKEMVAKRIHPNEITFNILIDGFCRDENVTAAKKVFEEMQRQGLQPNVVTYNSLIN 342

Query: 614 AFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGFCHELM 666
                G+L +A  L   M  +GLKP++ TY  L++           GFC + M
Sbjct: 343 GLCSNGKLDEALGLQDKMSGMGLKPNVVTYNALIN-----------GFCKKKM 384



 Score =  123 bits (309), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 91/333 (27%), Positives = 147/333 (44%), Gaps = 67/333 (20%)

Query: 291 FASTGNVVESVSRILRQWKWGPLAEEALGNTNYSMDAY-------QANQVLKQLQDHTVA 343
           F   G+VVE     ++ W + P    ++   N  +D Y       +A+ +LK++    + 
Sbjct: 245 FQKAGDVVED----MKAWGFSP----SVITYNTIIDGYCKAGKMFKADALLKEMVAKRI- 295

Query: 344 LGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIH 403
                          +E T+  ++    R     A  K+ ++M R G QPNVVTYN LI+
Sbjct: 296 -------------HPNEITFNILIDGFCRDENVTAAKKVFEEMQRQGLQPNVVTYNSLIN 342

Query: 404 SYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSP 463
                  L+EAL +  +M  +G +P+ VTY  LI+   K   L  A +M   +   GL+P
Sbjct: 343 GLCSNGKLDEALGLQDKMSGMGLKPNVVTYNALINGFCKKKMLKEAREMLDDIGKRGLAP 402

Query: 464 DTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLY 523
           +  T++ +I+  GKAG +  A  L   M++ G  PN+ TYN +I    +  N + A KL 
Sbjct: 403 NVITFNTLIDAYGKAGRMDDAFLLRSMMLDTGVCPNVSTYNCLIVGFCREGNVKEARKLA 462

Query: 524 RDMQNAGFEPDKVTYSIVMEVL------------------------------------GH 547
           ++M+  G + D VTY+I+++ L                                    G 
Sbjct: 463 KEMEGNGLKADLVTYNILVDALCKKGETRKAVRLLDEMTLMEKKGRRANIVTYNVLIKGF 522

Query: 548 C--GYLDEAEAVFAEMRRKNWVPDEPVYGLLVD 578
           C  G L+EA  +  EM  K  +P+   Y +L D
Sbjct: 523 CNKGKLEEANRLLNEMLEKGLIPNRTTYDILRD 555



 Score = 99.0 bits (245), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 57/205 (27%), Positives = 103/205 (50%), Gaps = 3/205 (1%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           G K +  TY  ++    + +      ++LD + + G  PNV+T+N LI +YG+A  +++A
Sbjct: 364 GLKPNVVTYNALINGFCKKKMLKEAREMLDDIGKRGLAPNVITFNTLIDAYGKAGRMDDA 423

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
             +   M   G  P+  TY  LI    + G +  A  + K+M+  GL  D  TY+++++ 
Sbjct: 424 FLLRSMMLDTGVCPNVSTYNCLIVGFCREGNVKEARKLAKEMEGNGLKADLVTYNILVDA 483

Query: 475 LGKAGHLQAAHQLFCEMV---NQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF 531
           L K G  + A +L  EM     +G   N+VTYN++I         + A +L  +M   G 
Sbjct: 484 LCKKGETRKAVRLLDEMTLMEKKGRRANIVTYNVLIKGFCNKGKLEEANRLLNEMLEKGL 543

Query: 532 EPDKVTYSIVMEVLGHCGYLDEAEA 556
            P++ TY I+ + +   G++ + + 
Sbjct: 544 IPNRTTYDILRDEMMEKGFIPDIDG 568


>gi|449488099|ref|XP_004157939.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g06000-like [Cucumis sativus]
          Length = 548

 Score =  150 bits (379), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 106/434 (24%), Positives = 191/434 (44%), Gaps = 42/434 (9%)

Query: 317 ALGNTNYSMDAYQANQVLKQLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQF 376
             G  + +++   A +V+K+  D  + L FF + R      H  +TY  ++  L +    
Sbjct: 66  CFGYLSRNLNPSIAFEVIKRFSDPLLGLKFFEFSRTHLSINHTFNTYDLLMRNLCKVGLN 125

Query: 377 GAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTL 436
            +   + D M  DG  P+      L+ SY R   L+ A +   ++   G +     Y  L
Sbjct: 126 DSAKIVFDCMRSDGILPDSSILELLVSSYARMGKLDSAKNFLNEVHCYGIKVSPFVYNNL 185

Query: 437 IDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGC 496
           +++  K   +D A+ ++++       PD ++++++I  L + G +  A + F  M N GC
Sbjct: 186 LNMLVKQNLVDEAVLLFREHLEPYFVPDVYSFNILIRGLCRIGEIDKAFEFFQNMGNFGC 245

Query: 497 IPNLVTYNIMIALQAKARNYQSALKLYR-DMQNAGFEPDKVTYSIVMEVLGHC--GYLDE 553
            P++V+YN +I    +         L + DM   G  PD +TY+ ++   G+C  G +  
Sbjct: 246 FPDIVSYNTLINGFCRVNEISKGHDLLKEDMLIKGVSPDVITYTSIIS--GYCKLGDMKA 303

Query: 554 AEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLS 613
           A  +F EM      P++  + +L+D +GK GN+R A   YE ML  G  P+V T  SL+ 
Sbjct: 304 ASELFDEMVSSGIKPNDFTFNVLIDGFGKVGNMRSAMVMYEKMLLLGCLPDVVTFTSLID 363

Query: 614 AFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL-SCCTEARSPYDMGFCHELMAVSGHP 672
            + R G+++    L + M    L P++ TY +L+ + C E R                  
Sbjct: 364 GYCREGEVNQGLKLWEEMKVRNLSPNVYTYAVLINALCKENR------------------ 405

Query: 673 AHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRESKRGLVDAVVDFLHKSGLKEEAGSV 732
                            +R+   +FL  + S +   K  + + V+D   K+G  +EA  +
Sbjct: 406 -----------------IRE-ARNFLRHLKSSEVVPKPFIYNPVIDGFCKAGKVDEANFI 447

Query: 733 WEVAAQKNVYPDAV 746
                +K   PD +
Sbjct: 448 VAEMQEKKCRPDKI 461



 Score =  142 bits (357), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 88/328 (26%), Positives = 166/328 (50%), Gaps = 5/328 (1%)

Query: 331 NQVLKQ-LQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRD 389
           N ++KQ L D  V L F   L  +  F  D +++  ++  L R  +     +    M   
Sbjct: 187 NMLVKQNLVDEAVLL-FREHL--EPYFVPDVYSFNILIRGLCRIGEIDKAFEFFQNMGNF 243

Query: 390 GCQPNVVTYNRLIHSYGRANYLNEALDVFKQ-MQVVGCEPDRVTYCTLIDIHAKAGFLDV 448
           GC P++V+YN LI+ + R N +++  D+ K+ M + G  PD +TY ++I  + K G +  
Sbjct: 244 GCFPDIVSYNTLINGFCRVNEISKGHDLLKEDMLIKGVSPDVITYTSIISGYCKLGDMKA 303

Query: 449 AMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIA 508
           A +++ +M ++G+ P+ FT++V+I+  GK G++++A  ++ +M+  GC+P++VT+  +I 
Sbjct: 304 ASELFDEMVSSGIKPNDFTFNVLIDGFGKVGNMRSAMVMYEKMLLLGCLPDVVTFTSLID 363

Query: 509 LQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVP 568
              +       LKL+ +M+     P+  TY++++  L     + EA      ++    VP
Sbjct: 364 GYCREGEVNQGLKLWEEMKVRNLSPNVYTYAVLINALCKENRIREARNFLRHLKSSEVVP 423

Query: 569 DEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLL 628
              +Y  ++D + KAG V +A      M +   RP+  T   L+      G++ +A    
Sbjct: 424 KPFIYNPVIDGFCKAGKVDEANFIVAEMQEKKCRPDKITFTILIIGNCMKGRMVEAISTF 483

Query: 629 QGMLNLGLKPSLQTYTLLLSCCTEARSP 656
             M+ +   P   T   L+SC  +A  P
Sbjct: 484 YKMIEINCVPDEITINSLISCLLKAGMP 511



 Score =  133 bits (335), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 76/246 (30%), Positives = 133/246 (54%), Gaps = 4/246 (1%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           G   D  TYT+++    +     A ++L D+MV  G +PN  T+N LI  +G+   +  A
Sbjct: 280 GVSPDVITYTSIISGYCKLGDMKAASELFDEMVSSGIKPNDFTFNVLIDGFGKVGNMRSA 339

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
           + ++++M ++GC PD VT+ +LID + + G ++  + ++++M+   LSP+ +TY+V+IN 
Sbjct: 340 MVMYEKMLLLGCLPDVVTFTSLIDGYCREGEVNQGLKLWEEMKVRNLSPNVYTYAVLINA 399

Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPD 534
           L K   ++ A      + +   +P    YN +I    KA     A  +  +MQ     PD
Sbjct: 400 LCKENRIREARNFLRHLKSSEVVPKPFIYNPVIDGFCKAGKVDEANFIVAEMQEKKCRPD 459

Query: 535 KVTYSIVMEVLGHC--GYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEW 592
           K+T++I+  ++G+C  G + EA + F +M   N VPDE     L+    KAG   +A + 
Sbjct: 460 KITFTIL--IIGNCMKGRMVEAISTFYKMIEINCVPDEITINSLISCLLKAGMPNEASQI 517

Query: 593 YEAMLQ 598
            +A LQ
Sbjct: 518 KQAALQ 523



 Score = 92.0 bits (227), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 50/204 (24%), Positives = 101/204 (49%)

Query: 354 AGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNE 413
           +G K ++ T+  ++   G+     +   + ++M+  GC P+VVT+  LI  Y R   +N+
Sbjct: 314 SGIKPNDFTFNVLIDGFGKVGNMRSAMVMYEKMLLLGCLPDVVTFTSLIDGYCREGEVNQ 373

Query: 414 ALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIIN 473
            L ++++M+V    P+  TY  LI+   K   +  A +  + ++++ + P  F Y+ +I+
Sbjct: 374 GLKLWEEMKVRNLSPNVYTYAVLINALCKENRIREARNFLRHLKSSEVVPKPFIYNPVID 433

Query: 474 CLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEP 533
              KAG +  A+ +  EM  + C P+ +T+ I+I           A+  +  M      P
Sbjct: 434 GFCKAGKVDEANFIVAEMQEKKCRPDKITFTILIIGNCMKGRMVEAISTFYKMIEINCVP 493

Query: 534 DKVTYSIVMEVLGHCGYLDEAEAV 557
           D++T + ++  L   G  +EA  +
Sbjct: 494 DEITINSLISCLLKAGMPNEASQI 517


>gi|449446624|ref|XP_004141071.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g06000-like [Cucumis sativus]
          Length = 548

 Score =  150 bits (379), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 92/342 (26%), Positives = 164/342 (47%), Gaps = 6/342 (1%)

Query: 317 ALGNTNYSMDAYQANQVLKQLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQF 376
             G  + +++   A +V+K+  D  + L FF + R      H  +TY  ++  L +    
Sbjct: 66  CFGYLSRNLNPSIAFEVIKRFSDPLLGLKFFEFSRTHLSINHTFNTYDLLMRNLCKVGLN 125

Query: 377 GAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTL 436
            +   + D M  DG  P+      L+ SY R   L+ A +   ++   G +     Y  L
Sbjct: 126 DSAKIVFDCMRSDGILPDSSILELLVSSYARMGKLDSAKNFLNEVHCYGIKVSPFVYNNL 185

Query: 437 IDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGC 496
           +++  K   +D A+ ++++       PD ++++++I  L + G +  A + F  M N GC
Sbjct: 186 LNMLVKQNLVDEAVLLFREHLEPYFVPDVYSFNILIRGLCRIGEIDKAFEFFQNMGNFGC 245

Query: 497 IPNLVTYNIMIALQAKARNYQSALKLYR-DMQNAGFEPDKVTYSIVMEVLGHC--GYLDE 553
            P++V+YN +I    +         L + DM   G  PD +TY+ ++   G+C  G +  
Sbjct: 246 FPDIVSYNTLINGFCRVNEISKGHDLLKEDMLIKGVSPDVITYTSIIS--GYCKLGDMKA 303

Query: 554 AEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLS 613
           A  +F EM      P++  + +L+D +GK GN+R A   YE ML  G  P+V T  SL+ 
Sbjct: 304 ASELFDEMVSSGIKPNDFTFNVLIDGFGKVGNMRSAMVMYEKMLLLGCLPDVVTFTSLID 363

Query: 614 AFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL-SCCTEAR 654
            + R G+++    L + M    L P++ TY +L+ + C E R
Sbjct: 364 GYCREGEVNQGLKLWEEMKVRNLSPNVYTYAVLINALCKENR 405



 Score =  142 bits (357), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 88/328 (26%), Positives = 166/328 (50%), Gaps = 5/328 (1%)

Query: 331 NQVLKQ-LQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRD 389
           N ++KQ L D  V L F   L  +  F  D +++  ++  L R  +     +    M   
Sbjct: 187 NMLVKQNLVDEAVLL-FREHL--EPYFVPDVYSFNILIRGLCRIGEIDKAFEFFQNMGNF 243

Query: 390 GCQPNVVTYNRLIHSYGRANYLNEALDVFKQ-MQVVGCEPDRVTYCTLIDIHAKAGFLDV 448
           GC P++V+YN LI+ + R N +++  D+ K+ M + G  PD +TY ++I  + K G +  
Sbjct: 244 GCFPDIVSYNTLINGFCRVNEISKGHDLLKEDMLIKGVSPDVITYTSIISGYCKLGDMKA 303

Query: 449 AMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIA 508
           A +++ +M ++G+ P+ FT++V+I+  GK G++++A  ++ +M+  GC+P++VT+  +I 
Sbjct: 304 ASELFDEMVSSGIKPNDFTFNVLIDGFGKVGNMRSAMVMYEKMLLLGCLPDVVTFTSLID 363

Query: 509 LQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVP 568
              +       LKL+ +M+     P+  TY++++  L     + EA      ++    VP
Sbjct: 364 GYCREGEVNQGLKLWEEMKVRNLSPNVYTYAVLINALCKENRIREARNFLRHLKSSEVVP 423

Query: 569 DEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLL 628
              +Y  ++D + KAG V +A      M +   RP+  T   L+      G++ +A    
Sbjct: 424 KPFIYNPVIDGFCKAGKVDEANFIVAEMQEKKCRPDKITFTILIIGNCMKGRMVEAISTF 483

Query: 629 QGMLNLGLKPSLQTYTLLLSCCTEARSP 656
             M+ +   P   T   L+SC  +A  P
Sbjct: 484 YKMIEINCVPDEITINSLISCLLKAGMP 511



 Score =  133 bits (335), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 76/246 (30%), Positives = 133/246 (54%), Gaps = 4/246 (1%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           G   D  TYT+++    +     A ++L D+MV  G +PN  T+N LI  +G+   +  A
Sbjct: 280 GVSPDVITYTSIISGYCKLGDMKAASELFDEMVSSGIKPNDFTFNVLIDGFGKVGNMRSA 339

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
           + ++++M ++GC PD VT+ +LID + + G ++  + ++++M+   LSP+ +TY+V+IN 
Sbjct: 340 MVMYEKMLLLGCLPDVVTFTSLIDGYCREGEVNQGLKLWEEMKVRNLSPNVYTYAVLINA 399

Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPD 534
           L K   ++ A      + +   +P    YN +I    KA     A  +  +MQ     PD
Sbjct: 400 LCKENRIREARNFLRHLKSSEVVPKPFIYNPVIDGFCKAGKVDEANFIVAEMQEKKCRPD 459

Query: 535 KVTYSIVMEVLGHC--GYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEW 592
           K+T++I+  ++G+C  G + EA + F +M   N VPDE     L+    KAG   +A + 
Sbjct: 460 KITFTIL--IIGNCMKGRMVEAISTFYKMIEINCVPDEITINSLISCLLKAGMPNEASQI 517

Query: 593 YEAMLQ 598
            +A LQ
Sbjct: 518 KQAALQ 523



 Score = 92.0 bits (227), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 50/204 (24%), Positives = 101/204 (49%)

Query: 354 AGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNE 413
           +G K ++ T+  ++   G+     +   + ++M+  GC P+VVT+  LI  Y R   +N+
Sbjct: 314 SGIKPNDFTFNVLIDGFGKVGNMRSAMVMYEKMLLLGCLPDVVTFTSLIDGYCREGEVNQ 373

Query: 414 ALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIIN 473
            L ++++M+V    P+  TY  LI+   K   +  A +  + ++++ + P  F Y+ +I+
Sbjct: 374 GLKLWEEMKVRNLSPNVYTYAVLINALCKENRIREARNFLRHLKSSEVVPKPFIYNPVID 433

Query: 474 CLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEP 533
              KAG +  A+ +  EM  + C P+ +T+ I+I           A+  +  M      P
Sbjct: 434 GFCKAGKVDEANFIVAEMQEKKCRPDKITFTILIIGNCMKGRMVEAISTFYKMIEINCVP 493

Query: 534 DKVTYSIVMEVLGHCGYLDEAEAV 557
           D++T + ++  L   G  +EA  +
Sbjct: 494 DEITINSLISCLLKAGMPNEASQI 517


>gi|242082678|ref|XP_002441764.1| hypothetical protein SORBIDRAFT_08g002022 [Sorghum bicolor]
 gi|241942457|gb|EES15602.1| hypothetical protein SORBIDRAFT_08g002022 [Sorghum bicolor]
          Length = 695

 Score =  150 bits (379), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 96/335 (28%), Positives = 160/335 (47%), Gaps = 36/335 (10%)

Query: 349 WLRRQA-GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGR 407
           ++R +A G   D  TY +++   G+      + +L+ +M + GC  +VVTYN LI+ + +
Sbjct: 223 FVRMKAMGCSPDVVTYNSLIDGYGKCGDLEEVEQLVSEMRKSGCAADVVTYNALINCFSK 282

Query: 408 ANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFT 467
              + +A   F +M+  G   + VT+ T +D   K G +  AM ++ +M+  G+ P+ FT
Sbjct: 283 FGRMEKAYSYFGEMKRQGVVANVVTFSTFVDAFCKEGLVQEAMKLFAQMRVRGMMPNEFT 342

Query: 468 YSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMI--------------ALQAKA 513
           Y+ +++   KAG L  A  L  EMV+QG +PN+VTY +M+               L    
Sbjct: 343 YTSLVDGTCKAGRLDDAIVLLDEMVHQGLVPNVVTYTVMVDGLCKEGKVAEADNVLSLME 402

Query: 514 R---------------------NYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLD 552
           R                     N + AL L   M+N G E D   Y  ++  L     +D
Sbjct: 403 RGGVKANELLYTTLIHGHFMNNNSERALDLLNQMKNKGMELDVSLYGTLIWGLCKDQKVD 462

Query: 553 EAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLL 612
           EA+++  +M      P+  +Y  ++D   KAG   +A      +L +G +PNV T  +L+
Sbjct: 463 EAKSLLHKMAGCGLRPNTVIYTTIMDALFKAGKESEAVALLHKILDSGFQPNVVTYCALI 522

Query: 613 SAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
               + G +S+A      M  LGL P++Q YT L+
Sbjct: 523 DGLCKAGSISEAISHFNKMRELGLDPNVQAYTALI 557



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 91/304 (29%), Positives = 148/304 (48%), Gaps = 5/304 (1%)

Query: 370 LGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPD 429
           L R RQ G + +L D +      PNV T+N +I    +   L EA  +F +M+ +GC PD
Sbjct: 179 LARNRQGGLVRRLFDLLP----VPNVFTFNIVIDFLCKEGELVEARALFVRMKAMGCSPD 234

Query: 430 RVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFC 489
            VTY +LID + K G L+    +  +M+ +G + D  TY+ +INC  K G ++ A+  F 
Sbjct: 235 VVTYNSLIDGYGKCGDLEEVEQLVSEMRKSGCAADVVTYNALINCFSKFGRMEKAYSYFG 294

Query: 490 EMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCG 549
           EM  QG + N+VT++  +    K    Q A+KL+  M+  G  P++ TY+ +++     G
Sbjct: 295 EMKRQGVVANVVTFSTFVDAFCKEGLVQEAMKLFAQMRVRGMMPNEFTYTSLVDGTCKAG 354

Query: 550 YLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCN 609
            LD+A  +  EM  +  VP+   Y ++VD   K G V +A      M + G++ N     
Sbjct: 355 RLDDAIVLLDEMVHQGLVPNVVTYTVMVDGLCKEGKVAEADNVLSLMERGGVKANELLYT 414

Query: 610 SLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTY-TLLLSCCTEARSPYDMGFCHELMAV 668
           +L+           A  LL  M N G++  +  Y TL+   C + +        H++   
Sbjct: 415 TLIHGHFMNNNSERALDLLNQMKNKGMELDVSLYGTLIWGLCKDQKVDEAKSLLHKMAGC 474

Query: 669 SGHP 672
              P
Sbjct: 475 GLRP 478



 Score =  132 bits (332), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 92/321 (28%), Positives = 150/321 (46%), Gaps = 12/321 (3%)

Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLI 402
           A+  F  +R + G   +E TYT++V    +A +      LLD+MV  G  PNVVTY  ++
Sbjct: 324 AMKLFAQMRVR-GMMPNEFTYTSLVDGTCKAGRLDDAIVLLDEMVHQGLVPNVVTYTVMV 382

Query: 403 HSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLS 462
               +   + EA +V   M+  G + + + Y TLI  H      + A+D+  +M+  G+ 
Sbjct: 383 DGLCKEGKVAEADNVLSLMERGGVKANELLYTTLIHGHFMNNNSERALDLLNQMKNKGME 442

Query: 463 PDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKL 522
            D   Y  +I  L K   +  A  L  +M   G  PN V Y  ++    KA     A+ L
Sbjct: 443 LDVSLYGTLIWGLCKDQKVDEAKSLLHKMAGCGLRPNTVIYTTIMDALFKAGKESEAVAL 502

Query: 523 YRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGK 582
              + ++GF+P+ VTY  +++ L   G + EA + F +MR     P+   Y  L+D + K
Sbjct: 503 LHKILDSGFQPNVVTYCALIDGLCKAGSISEAISHFNKMRELGLDPNVQAYTALIDGFCK 562

Query: 583 AGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQT 642
            G++ KA      M+  G+  +     SL+  +++   L DA+ L   M+  GL+  L  
Sbjct: 563 IGSLNKAMHLMNEMIDKGMSLDKVVYTSLIDGYMKQANLQDAFALKTKMIESGLQLDLYC 622

Query: 643 YTLLLSCCTEARSPYDMGFCH 663
           YT  +S           GFC+
Sbjct: 623 YTCFIS-----------GFCN 632



 Score =  129 bits (325), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 85/286 (29%), Positives = 139/286 (48%)

Query: 362 TYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQM 421
           TYT MV  L +  +    + +L  M R G + N + Y  LIH +   N    ALD+  QM
Sbjct: 377 TYTVMVDGLCKEGKVAEADNVLSLMERGGVKANELLYTTLIHGHFMNNNSERALDLLNQM 436

Query: 422 QVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHL 481
           +  G E D   Y TLI    K   +D A  +  KM   GL P+T  Y+ I++ L KAG  
Sbjct: 437 KNKGMELDVSLYGTLIWGLCKDQKVDEAKSLLHKMAGCGLRPNTVIYTTIMDALFKAGKE 496

Query: 482 QAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIV 541
             A  L  ++++ G  PN+VTY  +I    KA +   A+  +  M+  G +P+   Y+ +
Sbjct: 497 SEAVALLHKILDSGFQPNVVTYCALIDGLCKAGSISEAISHFNKMRELGLDPNVQAYTAL 556

Query: 542 MEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGL 601
           ++     G L++A  +  EM  K    D+ VY  L+D + K  N++ A+     M+++GL
Sbjct: 557 IDGFCKIGSLNKAMHLMNEMIDKGMSLDKVVYTSLIDGYMKQANLQDAFALKTKMIESGL 616

Query: 602 RPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
           + ++      +S F  +  + +A  +L  M+  G+ P    Y  L+
Sbjct: 617 QLDLYCYTCFISGFCNMNMMQEARGVLSEMIGTGITPDKTVYNCLI 662



 Score =  120 bits (300), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 82/305 (26%), Positives = 141/305 (46%), Gaps = 1/305 (0%)

Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLI 402
           A  +F  ++RQ G   +  T++T V    +        KL  QM   G  PN  TY  L+
Sbjct: 289 AYSYFGEMKRQ-GVVANVVTFSTFVDAFCKEGLVQEAMKLFAQMRVRGMMPNEFTYTSLV 347

Query: 403 HSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLS 462
               +A  L++A+ +  +M   G  P+ VTY  ++D   K G +  A ++   M+  G+ 
Sbjct: 348 DGTCKAGRLDDAIVLLDEMVHQGLVPNVVTYTVMVDGLCKEGKVAEADNVLSLMERGGVK 407

Query: 463 PDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKL 522
            +   Y+ +I+      + + A  L  +M N+G   ++  Y  +I    K +    A  L
Sbjct: 408 ANELLYTTLIHGHFMNNNSERALDLLNQMKNKGMELDVSLYGTLIWGLCKDQKVDEAKSL 467

Query: 523 YRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGK 582
              M   G  P+ V Y+ +M+ L   G   EA A+  ++    + P+   Y  L+D   K
Sbjct: 468 LHKMAGCGLRPNTVIYTTIMDALFKAGKESEAVALLHKILDSGFQPNVVTYCALIDGLCK 527

Query: 583 AGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQT 642
           AG++ +A   +  M + GL PNV    +L+  F ++G L+ A HL+  M++ G+      
Sbjct: 528 AGSISEAISHFNKMRELGLDPNVQAYTALIDGFCKIGSLNKAMHLMNEMIDKGMSLDKVV 587

Query: 643 YTLLL 647
           YT L+
Sbjct: 588 YTSLI 592



 Score =  110 bits (274), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 90/344 (26%), Positives = 152/344 (44%), Gaps = 33/344 (9%)

Query: 435 TLIDIHAKAGFLDVAMDMYKKMQAAGLSPDT----------------------------- 465
           TL+ + A  G LD A+    +++   + P+T                             
Sbjct: 139 TLLSLLADHGLLDDAVRALARVRQLRVPPNTRTCNHILLRLARNRQGGLVRRLFDLLPVP 198

Query: 466 --FTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLY 523
             FT++++I+ L K G L  A  LF  M   GC P++VTYN +I    K  + +   +L 
Sbjct: 199 NVFTFNIVIDFLCKEGELVEARALFVRMKAMGCSPDVVTYNSLIDGYGKCGDLEEVEQLV 258

Query: 524 RDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKA 583
            +M+ +G   D VTY+ ++      G +++A + F EM+R+  V +   +   VD + K 
Sbjct: 259 SEMRKSGCAADVVTYNALINCFSKFGRMEKAYSYFGEMKRQGVVANVVTFSTFVDAFCKE 318

Query: 584 GNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTY 643
           G V++A + +  M   G+ PN  T  SL+    + G+L DA  LL  M++ GL P++ TY
Sbjct: 319 GLVQEAMKLFAQMRVRGMMPNEFTYTSLVDGTCKAGRLDDAIVLLDEMVHQGLVPNVVTY 378

Query: 644 TLLLS-CCTEARSPYDMGFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMH 702
           T+++   C E +   +      LM   G  A+  L +    G    N  +     L  M 
Sbjct: 379 TVMVDGLCKEGKVA-EADNVLSLMERGGVKANELLYTTLIHGHFMNNNSERALDLLNQMK 437

Query: 703 SEDRESKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAV 746
           ++  E    L   ++  L K    +EA S+    A   + P+ V
Sbjct: 438 NKGMELDVSLYGTLIWGLCKDQKVDEAKSLLHKMAGCGLRPNTV 481



 Score = 97.1 bits (240), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 63/207 (30%), Positives = 102/207 (49%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           G + +   YTT++  L +A +      LL +++  G QPNVVTY  LI    +A  ++EA
Sbjct: 475 GLRPNTVIYTTIMDALFKAGKESEAVALLHKILDSGFQPNVVTYCALIDGLCKAGSISEA 534

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
           +  F +M+ +G +P+   Y  LID   K G L+ AM +  +M   G+S D   Y+ +I+ 
Sbjct: 535 ISHFNKMRELGLDPNVQAYTALIDGFCKIGSLNKAMHLMNEMIDKGMSLDKVVYTSLIDG 594

Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPD 534
             K  +LQ A  L  +M+  G   +L  Y   I+        Q A  +  +M   G  PD
Sbjct: 595 YMKQANLQDAFALKTKMIESGLQLDLYCYTCFISGFCNMNMMQEARGVLSEMIGTGITPD 654

Query: 535 KVTYSIVMEVLGHCGYLDEAEAVFAEM 561
           K  Y+ ++      G ++EA ++  EM
Sbjct: 655 KTVYNCLIRKYQKLGNMEEASSLQNEM 681



 Score = 77.4 bits (189), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 49/176 (27%), Positives = 80/176 (45%)

Query: 354 AGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNE 413
           +GF+ +  TY  ++  L +A          ++M   G  PNV  Y  LI  + +   LN+
Sbjct: 509 SGFQPNVVTYCALIDGLCKAGSISEAISHFNKMRELGLDPNVQAYTALIDGFCKIGSLNK 568

Query: 414 ALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIIN 473
           A+ +  +M   G   D+V Y +LID + K   L  A  +  KM  +GL  D + Y+  I+
Sbjct: 569 AMHLMNEMIDKGMSLDKVVYTSLIDGYMKQANLQDAFALKTKMIESGLQLDLYCYTCFIS 628

Query: 474 CLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNA 529
                  +Q A  +  EM+  G  P+   YN +I    K  N + A  L  +M++ 
Sbjct: 629 GFCNMNMMQEARGVLSEMIGTGITPDKTVYNCLIRKYQKLGNMEEASSLQNEMESV 684



 Score = 50.4 bits (119), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 38/152 (25%), Positives = 67/152 (44%), Gaps = 7/152 (4%)

Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINK---LLDQMVRDGCQPNVVTYN 399
           A+  FN +R + G   +   YT ++    +    G++NK   L+++M+  G   + V Y 
Sbjct: 534 AISHFNKMR-ELGLDPNVQAYTALIDGFCK---IGSLNKAMHLMNEMIDKGMSLDKVVYT 589

Query: 400 RLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAA 459
            LI  Y +   L +A  +  +M   G + D   Y   I        +  A  +  +M   
Sbjct: 590 SLIDGYMKQANLQDAFALKTKMIESGLQLDLYCYTCFISGFCNMNMMQEARGVLSEMIGT 649

Query: 460 GLSPDTFTYSVIINCLGKAGHLQAAHQLFCEM 491
           G++PD   Y+ +I    K G+++ A  L  EM
Sbjct: 650 GITPDKTVYNCLIRKYQKLGNMEEASSLQNEM 681


>gi|125526112|gb|EAY74226.1| hypothetical protein OsI_02107 [Oryza sativa Indica Group]
          Length = 540

 Score =  150 bits (379), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 100/370 (27%), Positives = 184/370 (49%), Gaps = 16/370 (4%)

Query: 283 GLAPFSRHFASTGNVVESVSRILR---QWKWGPLAEEALGNTNYSMDAYQANQVLKQLQD 339
           GLAP            E V R++    + +  P+ + ALG T   +      +VLK L +
Sbjct: 83  GLAP------GVSEAAERVCRVVSAQPEHRIAPVLD-ALGVT---VSPQLVAEVLKNLSN 132

Query: 340 HTV-ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTY 398
             + AL FF W  RQ GF++    +  ++  LG+ +QF  +  L++ M    C     T+
Sbjct: 133 AGILALAFFRWAERQQGFRYSAEGFHNLIEALGKIKQFRLVWSLVEAMRCRSCLSKD-TF 191

Query: 399 NRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQA 458
             ++  Y RA  + EA++ F++M   G + D   Y  LIDI +K+  +  A  ++K+M+ 
Sbjct: 192 KIIVRRYARARKVKEAVETFEKMSSFGLKTDLSDYNWLIDILSKSKQVKKAHAIFKEMKR 251

Query: 459 AG-LSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQ 517
            G   PD  TY+V++   G    L     ++ EM++ G  P++V Y ++I+   K+    
Sbjct: 252 KGRFIPDLKTYTVLMEGWGHEKDLLMLKAVYQEMLDAGIKPDVVAYGMLISAFCKSGKCD 311

Query: 518 SALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLV 577
            A+K++ +M+ +G  P    Y +++  LG    LDEA   F   +   +  + P    ++
Sbjct: 312 EAIKVFHEMEESGCMPSPHVYCMLINGLGSMERLDEALKYFQLSKESGFPMEVPTCNAVI 371

Query: 578 DLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLK 637
             + +A     A++  + M ++G+ PN  T + +L+  ++  ++ +AY+L Q M   G +
Sbjct: 372 GAYCRALEFHHAFKMVDEMRKSGIGPNTRTYDIILNHLIKSEKIEEAYNLFQRMERDGCE 431

Query: 638 PSLQTYTLLL 647
           P L TYT+++
Sbjct: 432 PELNTYTMMV 441



 Score =  123 bits (308), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 84/350 (24%), Positives = 165/350 (47%), Gaps = 8/350 (2%)

Query: 289 RHFASTGNVVESVSRILRQWKWGPLAEEALGNTNYSMDAYQANQVLKQLQDHTVALGFFN 348
           R +A    V E+V    +   +G   +  L + N+ +D    ++ +K+      A   F 
Sbjct: 196 RRYARARKVKEAVETFEKMSSFG--LKTDLSDYNWLIDILSKSKQVKK------AHAIFK 247

Query: 349 WLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRA 408
            ++R+  F  D  TYT ++   G  +    +  +  +M+  G +P+VV Y  LI ++ ++
Sbjct: 248 EMKRKGRFIPDLKTYTVLMEGWGHEKDLLMLKAVYQEMLDAGIKPDVVAYGMLISAFCKS 307

Query: 409 NYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTY 468
              +EA+ VF +M+  GC P    YC LI+       LD A+  ++  + +G   +  T 
Sbjct: 308 GKCDEAIKVFHEMEESGCMPSPHVYCMLINGLGSMERLDEALKYFQLSKESGFPMEVPTC 367

Query: 469 SVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQN 528
           + +I    +A     A ++  EM   G  PN  TY+I++    K+   + A  L++ M+ 
Sbjct: 368 NAVIGAYCRALEFHHAFKMVDEMRKSGIGPNTRTYDIILNHLIKSEKIEEAYNLFQRMER 427

Query: 529 AGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRK 588
            G EP+  TY++++ +      +D A  V+ +M+ K  +P   ++  L++       + +
Sbjct: 428 DGCEPELNTYTMMVGMFCSNERVDMALKVWKQMKEKGVLPCMHMFSALINGLCFDNRLEE 487

Query: 589 AWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKP 638
           A  +++ ML  G+RP     ++L  A +  G+++ A  + Q +  L   P
Sbjct: 488 ACVYFQEMLDKGIRPPGQLFSNLKEALVEGGRITLAQEVTQRLEMLRRTP 537



 Score = 90.1 bits (222), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 56/207 (27%), Positives = 102/207 (49%), Gaps = 3/207 (1%)

Query: 443 AGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVT 502
           AG L +A   + + Q  G       +  +I  LGK    +    L   M  + C+    T
Sbjct: 133 AGILALAFFRWAERQQ-GFRYSAEGFHNLIEALGKIKQFRLVWSLVEAMRCRSCLSK-DT 190

Query: 503 YNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMR 562
           + I++   A+AR  + A++ +  M + G + D   Y+ ++++L     + +A A+F EM+
Sbjct: 191 FKIIVRRYARARKVKEAVETFEKMSSFGLKTDLSDYNWLIDILSKSKQVKKAHAIFKEMK 250

Query: 563 RK-NWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQL 621
           RK  ++PD   Y +L++ WG   ++      Y+ ML AG++P+V     L+SAF + G+ 
Sbjct: 251 RKGRFIPDLKTYTVLMEGWGHEKDLLMLKAVYQEMLDAGIKPDVVAYGMLISAFCKSGKC 310

Query: 622 SDAYHLLQGMLNLGLKPSLQTYTLLLS 648
            +A  +   M   G  PS   Y +L++
Sbjct: 311 DEAIKVFHEMEESGCMPSPHVYCMLIN 337


>gi|242054609|ref|XP_002456450.1| hypothetical protein SORBIDRAFT_03g036550 [Sorghum bicolor]
 gi|241928425|gb|EES01570.1| hypothetical protein SORBIDRAFT_03g036550 [Sorghum bicolor]
          Length = 669

 Score =  150 bits (379), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 100/343 (29%), Positives = 163/343 (47%), Gaps = 43/343 (12%)

Query: 345 GFFNWLRRQAG---FKHDEHTYTTMVGIL-GRARQFGAINKLLDQMVRDGCQPNVVTYNR 400
           G  +  RR  G      D +TYT ++ +L  R R   A++ LLD M+R GCQPNVVTY  
Sbjct: 125 GHLDAARRLIGSMPVAPDAYTYTPLIRVLCDRGRVADALS-LLDDMLRRGCQPNVVTYTV 183

Query: 401 LIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAG 460
           L+ +  R +   +A+ V  +M+  GC P+ VTY  +I+   + G +D A ++  ++ + G
Sbjct: 184 LLEAMCRNSGFEQAMAVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDARELLNRLPSYG 243

Query: 461 LSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMI-----------AL 509
             PDT +Y+ ++  L  +       +LF EM+ + C+PN VT++++I           A+
Sbjct: 244 FQPDTVSYTTLLKGLCASKRWDDVEELFAEMMEKNCMPNEVTFDMLIRFFCRGGMVERAI 303

Query: 510 Q------------------------AKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVL 545
           Q                         K      A KL  DM + G  PD ++Y+ V++ L
Sbjct: 304 QVLEQMTEHGCATNTTLCNIVINSICKQGRVDDAFKLLNDMGSYGCNPDTISYTTVLKGL 363

Query: 546 GHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNV 605
                 D+A+ +  EM R N  P+E  +   + +  + G + +A    E M + G    V
Sbjct: 364 CRAERWDDAKELLNEMVRNNCPPNEVTFNTFICILCQKGLIEQAIMLIEQMSEHGCTVGV 423

Query: 606 PTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
            T N+L++ F   G +  A  L + M     KP+  TYT LL+
Sbjct: 424 VTYNALVNGFCVQGHIDSALELFRSM---PCKPNTITYTTLLT 463



 Score =  139 bits (350), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 94/306 (30%), Positives = 148/306 (48%), Gaps = 7/306 (2%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           GF+ D  +YTT++  L  ++++  + +L  +M+   C PN VT++ LI  + R   +  A
Sbjct: 243 GFQPDTVSYTTLLKGLCASKRWDDVEELFAEMMEKNCMPNEVTFDMLIRFFCRGGMVERA 302

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
           + V +QM   GC  +      +I+   K G +D A  +   M + G +PDT +Y+ ++  
Sbjct: 303 IQVLEQMTEHGCATNTTLCNIVINSICKQGRVDDAFKLLNDMGSYGCNPDTISYTTVLKG 362

Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPD 534
           L +A     A +L  EMV   C PN VT+N  I +  +    + A+ L   M   G    
Sbjct: 363 LCRAERWDDAKELLNEMVRNNCPPNEVTFNTFICILCQKGLIEQAIMLIEQMSEHGCTVG 422

Query: 535 KVTYSIVMEVLGHC--GYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEW 592
            VTY+ ++   G C  G++D A  +F  M  K   P+   Y  L+     A  +  A E 
Sbjct: 423 VVTYNALVN--GFCVQGHIDSALELFRSMPCK---PNTITYTTLLTGLCNAERLDGAAEL 477

Query: 593 YEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTE 652
              ML+    PNV T N L+S F + G L +A  L++ M+  G  P+L TY  LL   T+
Sbjct: 478 VAEMLRGDCPPNVVTFNVLVSFFCQKGFLEEAIELVEQMMEHGCTPNLITYNTLLDGITK 537

Query: 653 ARSPYD 658
             S  D
Sbjct: 538 DCSSED 543



 Score =  135 bits (341), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 92/361 (25%), Positives = 169/361 (46%), Gaps = 17/361 (4%)

Query: 290 HFASTGNVVESVSRILRQWKWGPLAEEALGNTNYSMDAYQANQVLKQ--LQDHTVALGFF 347
            F   G +VE   ++L Q      A      TN ++     N + KQ  + D   A    
Sbjct: 291 RFFCRGGMVERAIQVLEQMTEHGCA------TNTTLCNIVINSICKQGRVDD---AFKLL 341

Query: 348 NWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGR 407
           N +    G   D  +YTT++  L RA ++    +LL++MVR+ C PN VT+N  I    +
Sbjct: 342 NDMG-SYGCNPDTISYTTVLKGLCRAERWDDAKELLNEMVRNNCPPNEVTFNTFICILCQ 400

Query: 408 ANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFT 467
              + +A+ + +QM   GC    VTY  L++     G +D A+++++ M      P+T T
Sbjct: 401 KGLIEQAIMLIEQMSEHGCTVGVVTYNALVNGFCVQGHIDSALELFRSMPC---KPNTIT 457

Query: 468 YSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQ 527
           Y+ ++  L  A  L  A +L  EM+   C PN+VT+N++++   +    + A++L   M 
Sbjct: 458 YTTLLTGLCNAERLDGAAELVAEMLRGDCPPNVVTFNVLVSFFCQKGFLEEAIELVEQMM 517

Query: 528 NAGFEPDKVTYSIVME-VLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNV 586
             G  P+ +TY+ +++ +   C   D  E +   +  K   PD   +  ++ +  K   +
Sbjct: 518 EHGCTPNLITYNTLLDGITKDCSSEDALELLHG-LVSKGVSPDVITFSSIIGILSKEDRI 576

Query: 587 RKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLL 646
            +A + +  +   G+RP     N +L    +  ++ +A      M++ G  P+  TY +L
Sbjct: 577 EEAVQLFHVVQDIGMRPKAVVYNKILLGLCKRCEIDNAIDFFAYMVSNGCMPNESTYIIL 636

Query: 647 L 647
           +
Sbjct: 637 I 637



 Score =  126 bits (317), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 77/278 (27%), Positives = 140/278 (50%), Gaps = 3/278 (1%)

Query: 359 DEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVF 418
           +E T+ T + IL +         L++QM   GC   VVTYN L++ +    +++ AL++F
Sbjct: 387 NEVTFNTFICILCQKGLIEQAIMLIEQMSEHGCTVGVVTYNALVNGFCVQGHIDSALELF 446

Query: 419 KQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKA 478
           + M    C+P+ +TY TL+     A  LD A ++  +M      P+  T++V+++   + 
Sbjct: 447 RSMP---CKPNTITYTTLLTGLCNAERLDGAAELVAEMLRGDCPPNVVTFNVLVSFFCQK 503

Query: 479 GHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTY 538
           G L+ A +L  +M+  GC PNL+TYN ++    K  + + AL+L   + + G  PD +T+
Sbjct: 504 GFLEEAIELVEQMMEHGCTPNLITYNTLLDGITKDCSSEDALELLHGLVSKGVSPDVITF 563

Query: 539 SIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQ 598
           S ++ +L     ++EA  +F  ++     P   VY  ++    K   +  A +++  M+ 
Sbjct: 564 SSIIGILSKEDRIEEAVQLFHVVQDIGMRPKAVVYNKILLGLCKRCEIDNAIDFFAYMVS 623

Query: 599 AGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGL 636
            G  PN  T   L+      G L +A  LL  + + G+
Sbjct: 624 NGCMPNESTYIILIEGLAHEGLLKEAQDLLSVLCSRGV 661



 Score =  124 bits (312), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 80/311 (25%), Positives = 140/311 (45%), Gaps = 32/311 (10%)

Query: 369 ILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEP 428
           ++ R    GA+  +      DG  P+V    +LI +  R    ++A  V +  +  G   
Sbjct: 50  LIAREDLAGAVRLVERSGSCDGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAEGSGSPV 109

Query: 429 DRVTYCTLIDIHAKAGFLDVAMDMYKKMQAA----------------------------- 459
           D   Y TL+  + + G LD A  +   M  A                             
Sbjct: 110 DVFAYNTLVAGYCRYGHLDAARRLIGSMPVAPDAYTYTPLIRVLCDRGRVADALSLLDDM 169

Query: 460 ---GLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNY 516
              G  P+  TY+V++  + +    + A  +  EM  +GC PN+VTYN++I    +    
Sbjct: 170 LRRGCQPNVVTYTVLLEAMCRNSGFEQAMAVLDEMRAKGCTPNIVTYNVIINGMCREGRV 229

Query: 517 QSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLL 576
             A +L   + + GF+PD V+Y+ +++ L      D+ E +FAEM  KN +P+E  + +L
Sbjct: 230 DDARELLNRLPSYGFQPDTVSYTTLLKGLCASKRWDDVEELFAEMMEKNCMPNEVTFDML 289

Query: 577 VDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGL 636
           +  + + G V +A +  E M + G   N   CN ++++  + G++ DA+ LL  M + G 
Sbjct: 290 IRFFCRGGMVERAIQVLEQMTEHGCATNTTLCNIVINSICKQGRVDDAFKLLNDMGSYGC 349

Query: 637 KPSLQTYTLLL 647
            P   +YT +L
Sbjct: 350 NPDTISYTTVL 360



 Score =  120 bits (300), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 74/249 (29%), Positives = 126/249 (50%), Gaps = 18/249 (7%)

Query: 329 QANQVLKQLQDHTVALGFFNW------------------LRRQAGFKHDEHTYTTMVGIL 370
           QA  +++Q+ +H   +G   +                  L R    K +  TYTT++  L
Sbjct: 406 QAIMLIEQMSEHGCTVGVVTYNALVNGFCVQGHIDSALELFRSMPCKPNTITYTTLLTGL 465

Query: 371 GRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDR 430
             A +     +L+ +M+R  C PNVVT+N L+  + +  +L EA+++ +QM   GC P+ 
Sbjct: 466 CNAERLDGAAELVAEMLRGDCPPNVVTFNVLVSFFCQKGFLEEAIELVEQMMEHGCTPNL 525

Query: 431 VTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCE 490
           +TY TL+D   K    + A+++   + + G+SPD  T+S II  L K   ++ A QLF  
Sbjct: 526 ITYNTLLDGITKDCSSEDALELLHGLVSKGVSPDVITFSSIIGILSKEDRIEEAVQLFHV 585

Query: 491 MVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGY 550
           + + G  P  V YN ++    K     +A+  +  M + G  P++ TY I++E L H G 
Sbjct: 586 VQDIGMRPKAVVYNKILLGLCKRCEIDNAIDFFAYMVSNGCMPNESTYIILIEGLAHEGL 645

Query: 551 LDEAEAVFA 559
           L EA+ + +
Sbjct: 646 LKEAQDLLS 654


>gi|224085950|ref|XP_002307751.1| predicted protein [Populus trichocarpa]
 gi|222857200|gb|EEE94747.1| predicted protein [Populus trichocarpa]
          Length = 480

 Score =  150 bits (379), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 96/350 (27%), Positives = 173/350 (49%), Gaps = 14/350 (4%)

Query: 298 VESVSRILRQWKWGPLAEEALGNTNYSMDAYQAN----------QVLKQLQDHTVALGFF 347
           VE+   ++R++    LA EA+   N  M+ Y              +L + +  + A  FF
Sbjct: 129 VETFLILMRRYVRAGLAAEAIHAFN-RMEDYNCKPDKIAFSILISILCRERRASQAQEFF 187

Query: 348 NWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGR 407
           + L+ +  F+ D   YT +V    RA       ++  +M   G +PNV TY+ +I S  R
Sbjct: 188 DSLKDK--FEPDVIVYTNLVRGWCRAGNISEAERVFGEMKVAGIKPNVYTYSIVIDSLCR 245

Query: 408 ANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFT 467
              +  A D+F +M   GC+P+ +TY +L+ IH KAG  +  + +Y +M+  G  PDT T
Sbjct: 246 CGQITRAHDIFAEMLDAGCQPNSITYNSLMRIHVKAGRTEKVLQVYNQMKRLGCEPDTVT 305

Query: 468 YSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQ 527
           Y+ +I    K  +L+ A ++   M  +GC PN  T+N +    AK  +  +A ++Y+ M+
Sbjct: 306 YNFLIETHCKDENLEDAIKVIGLMAKKGCAPNASTFNTLFGCIAKLGDVNAAHRMYKKMK 365

Query: 528 NAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVR 587
               E + VTY+ +M++       D    +  EM      P+   Y +L+ ++   G+  
Sbjct: 366 ELNCEANTVTYNTLMKMFVASKSTDMVLKLKTEMDENKIEPNVNTYKVLITMYCGMGHWN 425

Query: 588 KAWEWYEAML-QAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGL 636
            A++++  M+ +  LRP++P  + +L    + GQL     L++ M++ G 
Sbjct: 426 NAYKFFREMIDEKCLRPSLPVYDMVLQQLRKAGQLKKHEELVEKMVDRGF 475



 Score =  148 bits (374), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 82/255 (32%), Positives = 135/255 (52%), Gaps = 3/255 (1%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           + AG K + +TY+ ++  L R  Q    + +  +M+  GCQPN +TYN L+  + +A   
Sbjct: 225 KVAGIKPNVYTYSIVIDSLCRCGQITRAHDIFAEMLDAGCQPNSITYNSLMRIHVKAGRT 284

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
            + L V+ QM+ +GCEPD VTY  LI+ H K   L+ A+ +   M   G +P+  T++ +
Sbjct: 285 EKVLQVYNQMKRLGCEPDTVTYNFLIETHCKDENLEDAIKVIGLMAKKGCAPNASTFNTL 344

Query: 472 INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF 531
             C+ K G + AAH+++ +M    C  N VTYN ++ +   +++    LKL  +M     
Sbjct: 345 FGCIAKLGDVNAAHRMYKKMKELNCEANTVTYNTLMKMFVASKSTDMVLKLKTEMDENKI 404

Query: 532 EPDKVTYSIVMEVLGHCGYLDEAEAVFAEM-RRKNWVPDEPVYGLLVDLWGKAGNVRKAW 590
           EP+  TY +++ +    G+ + A   F EM   K   P  PVY +++    KAG ++K  
Sbjct: 405 EPNVNTYKVLITMYCGMGHWNNAYKFFREMIDEKCLRPSLPVYDMVLQQLRKAGQLKKHE 464

Query: 591 EWYEAMLQAGL--RP 603
           E  E M+  G   RP
Sbjct: 465 ELVEKMVDRGFVTRP 479



 Score =  140 bits (353), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 82/313 (26%), Positives = 144/313 (46%), Gaps = 1/313 (0%)

Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLI 402
            L FFNW   Q GF+     Y  MV   G+   F      +D M        V T+  L+
Sbjct: 77  VLAFFNWASNQDGFRKSPEAYNEMVDFSGQVMMFDVAWYFIDLMKARNVDVTVETFLILM 136

Query: 403 HSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLS 462
             Y RA    EA+  F +M+   C+PD++ +  LI I  +      A + +  ++     
Sbjct: 137 RRYVRAGLAAEAIHAFNRMEDYNCKPDKIAFSILISILCRERRASQAQEFFDSLKDK-FE 195

Query: 463 PDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKL 522
           PD   Y+ ++    +AG++  A ++F EM   G  PN+ TY+I+I    +      A  +
Sbjct: 196 PDVIVYTNLVRGWCRAGNISEAERVFGEMKVAGIKPNVYTYSIVIDSLCRCGQITRAHDI 255

Query: 523 YRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGK 582
           + +M +AG +P+ +TY+ +M +    G  ++   V+ +M+R    PD   Y  L++   K
Sbjct: 256 FAEMLDAGCQPNSITYNSLMRIHVKAGRTEKVLQVYNQMKRLGCEPDTVTYNFLIETHCK 315

Query: 583 AGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQT 642
             N+  A +    M + G  PN  T N+L     ++G ++ A+ + + M  L  + +  T
Sbjct: 316 DENLEDAIKVIGLMAKKGCAPNASTFNTLFGCIAKLGDVNAAHRMYKKMKELNCEANTVT 375

Query: 643 YTLLLSCCTEARS 655
           Y  L+     ++S
Sbjct: 376 YNTLMKMFVASKS 388


>gi|147833323|emb|CAN61988.1| hypothetical protein VITISV_026694 [Vitis vinifera]
          Length = 553

 Score =  150 bits (379), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 92/297 (30%), Positives = 149/297 (50%), Gaps = 2/297 (0%)

Query: 352 RQAGFKHDEHTYTTMV-GILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANY 410
           R  G K D  TY  ++ GI    R   AI K L+ M   GCQPNV+T+N ++ S      
Sbjct: 221 RNKGSKPDVVTYNVLINGICKEGRLDEAI-KFLNNMPSYGCQPNVITHNIILRSMCSTGR 279

Query: 411 LNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSV 470
             +A  +   M   GC P  VT+  LI+   + G L  A+D+ +KM   G +P++ +Y+ 
Sbjct: 280 WMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNP 339

Query: 471 IINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAG 530
           +++   K   +  A +    MV++GC P++VTYN ++    K      A+++   + + G
Sbjct: 340 LLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKG 399

Query: 531 FEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAW 590
             P  +TY+ V++ L   G  + A  +  EMRRK   PD   Y  LV    + G V +A 
Sbjct: 400 CSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAI 459

Query: 591 EWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
           +++  +   G+RPN  T NS++    +  Q   A   L  M++   KP+  TYT+L+
Sbjct: 460 KFFHDLEGLGIRPNAITYNSIMLGLCKSRQTDRAIDFLAYMISKRCKPTEATYTILI 516



 Score =  147 bits (371), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 98/364 (26%), Positives = 169/364 (46%), Gaps = 3/364 (0%)

Query: 314 AEEALGNTNYSMDAYQANQVLKQLQDHTVALGFFNWLRRQAGFKH--DEHTYTTMVGILG 371
           A + L   N + D    N +L+ L D          L RQ   +   D  TYT ++    
Sbjct: 146 ALQVLDRMNVAPDVVTYNTILRTLCDSGKLKQAMEVLDRQLQKECYPDVITYTILIEATC 205

Query: 372 RARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRV 431
           +    G   KLLD+M   G +P+VVTYN LI+   +   L+EA+     M   GC+P+ +
Sbjct: 206 KESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCQPNVI 265

Query: 432 TYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEM 491
           T+  ++      G    A  +   M   G SP   T++++IN L + G L  A  +  +M
Sbjct: 266 THNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKM 325

Query: 492 VNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYL 551
              GC PN ++YN ++    K +    A++    M + G  PD VTY+ ++  L   G +
Sbjct: 326 PMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKV 385

Query: 552 DEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSL 611
           D A  +  ++  K   P    Y  ++D   K G   +A +  + M + GL+P++ T +SL
Sbjct: 386 DVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSL 445

Query: 612 LSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTY-TLLLSCCTEARSPYDMGFCHELMAVSG 670
           +S   R G++ +A      +  LG++P+  TY +++L  C   ++   + F   +++   
Sbjct: 446 VSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNSIMLGLCKSRQTDRAIDFLAYMISKRC 505

Query: 671 HPAH 674
            P  
Sbjct: 506 KPTE 509



 Score =  139 bits (350), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 87/295 (29%), Positives = 145/295 (49%), Gaps = 3/295 (1%)

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
           Q+G   D  TY  ++   G  +  G I+  L  + R    P+VVTYN ++ +   +  L 
Sbjct: 120 QSGAVPDVITYNVLIS--GYCKS-GEIDNALQVLDRMNVAPDVVTYNTILRTLCDSGKLK 176

Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
           +A++V  +     C PD +TY  LI+   K   +  AM +  +M+  G  PD  TY+V+I
Sbjct: 177 QAMEVLDRQLQKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLI 236

Query: 473 NCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFE 532
           N + K G L  A +    M + GC PN++T+NI++        +  A KL  DM   G  
Sbjct: 237 NGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCS 296

Query: 533 PDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEW 592
           P  VT++I++  L   G L  A  +  +M      P+   Y  L+  + K   + +A E+
Sbjct: 297 PSVVTFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEY 356

Query: 593 YEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
            + M+  G  P++ T N+LL+A  + G++  A  +L  + + G  P L TY  ++
Sbjct: 357 LDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVI 411



 Score =  130 bits (327), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 76/256 (29%), Positives = 130/256 (50%)

Query: 381 KLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIH 440
           KLL  M+R GC P+VVT+N LI+   R   L  A+D+ ++M + GC P+ ++Y  L+   
Sbjct: 285 KLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGF 344

Query: 441 AKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNL 500
            K   +D A++    M + G  PD  TY+ ++  L K G +  A ++  ++ ++GC P L
Sbjct: 345 CKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVL 404

Query: 501 VTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAE 560
           +TYN +I   +K    + A+KL  +M+  G +PD +TYS ++  L   G +DEA   F +
Sbjct: 405 ITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHD 464

Query: 561 MRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQ 620
           +      P+   Y  ++    K+    +A ++   M+    +P   T   L+      G 
Sbjct: 465 LEGLGIRPNAITYNSIMLGLCKSRQTDRAIDFLAYMISKRCKPTEATYTILIEGIAYEGL 524

Query: 621 LSDAYHLLQGMLNLGL 636
             +A  LL  + + GL
Sbjct: 525 AKEALDLLNELCSRGL 540



 Score =  129 bits (323), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 69/240 (28%), Positives = 122/240 (50%)

Query: 362 TYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQM 421
           T+  ++  L R    G    +L++M   GC PN ++YN L+H + +   ++ A++    M
Sbjct: 301 TFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIM 360

Query: 422 QVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHL 481
              GC PD VTY TL+    K G +DVA+++  ++ + G SP   TY+ +I+ L K G  
Sbjct: 361 VSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKT 420

Query: 482 QAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIV 541
           + A +L  EM  +G  P+++TY+ +++  ++      A+K + D++  G  P+ +TY+ +
Sbjct: 421 ERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNSI 480

Query: 542 MEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGL 601
           M  L      D A    A M  K   P E  Y +L++     G  ++A +    +   GL
Sbjct: 481 MLGLCKSRQTDRAIDFLAYMISKRCKPTEATYTILIEGIAYEGLAKEALDLLNELCSRGL 540



 Score =  126 bits (317), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 97/368 (26%), Positives = 169/368 (45%), Gaps = 7/368 (1%)

Query: 381 KLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIH 440
           K L+ MV  G  P+++    LI  + R     +A  V + ++  G  PD +TY  LI  +
Sbjct: 78  KFLESMVYRGDIPDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGAVPDVITYNVLISGY 137

Query: 441 AKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNL 500
            K+G +D A+ +  +M  A   PD  TY+ I+  L  +G L+ A ++    + + C P++
Sbjct: 138 CKSGEIDNALQVLDRMNVA---PDVVTYNTILRTLCDSGKLKQAMEVLDRQLQKECYPDV 194

Query: 501 VTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAE 560
           +TY I+I    K      A+KL  +M+N G +PD VTY++++  +   G LDEA      
Sbjct: 195 ITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNN 254

Query: 561 MRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQ 620
           M      P+   + +++      G    A +    ML+ G  P+V T N L++   R G 
Sbjct: 255 MPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGL 314

Query: 621 LSDAYHLLQGMLNLGLKPSLQTYT-LLLSCCTEARSPYDMGFCHELMAVSGHPAHM-FLL 678
           L  A  +L+ M   G  P+  +Y  LL   C E +    + +   +++   +P  + +  
Sbjct: 315 LGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNT 374

Query: 679 SMPSPGPDGQNVRDHVGSFLEMMHSEDRESKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQ 738
            + +   DG+   D     L  + S+         + V+D L K G  E A  + +   +
Sbjct: 375 LLTALCKDGK--VDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRR 432

Query: 739 KNVYPDAV 746
           K + PD +
Sbjct: 433 KGLKPDII 440



 Score = 97.1 bits (240), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 69/243 (28%), Positives = 118/243 (48%), Gaps = 5/243 (2%)

Query: 407 RANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTF 466
           R   L +     + M   G  PD +   +LI    + G    A  + + ++ +G  PD  
Sbjct: 69  RNGELEDGFKFLESMVYRGDIPDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGAVPDVI 128

Query: 467 TYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALK-LYRD 525
           TY+V+I+   K+G +  A Q+   M      P++VTYN ++     +   + A++ L R 
Sbjct: 129 TYNVLISGYCKSGEIDNALQVLDRM---NVAPDVVTYNTILRTLCDSGKLKQAMEVLDRQ 185

Query: 526 MQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGN 585
           +Q   + PD +TY+I++E       + +A  +  EMR K   PD   Y +L++   K G 
Sbjct: 186 LQKECY-PDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGR 244

Query: 586 VRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTL 645
           + +A ++   M   G +PNV T N +L +    G+  DA  LL  ML  G  PS+ T+ +
Sbjct: 245 LDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNI 304

Query: 646 LLS 648
           L++
Sbjct: 305 LIN 307



 Score = 70.5 bits (171), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 73/306 (23%), Positives = 128/306 (41%), Gaps = 31/306 (10%)

Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPD 534
           L + G L+   +    MV +G IP+++    +I    +    + A  +   ++ +G  PD
Sbjct: 67  LVRNGELEDGFKFLESMVYRGDIPDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGAVPD 126

Query: 535 KVTYSIVMEVLGHC--GYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEW 592
            +TY++++   G+C  G +D A  V   M   N  PD   Y  ++     +G +++A E 
Sbjct: 127 VITYNVLIS--GYCKSGEIDNALQVLDRM---NVAPDVVTYNTILRTLCDSGKLKQAMEV 181

Query: 593 YEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS-CCT 651
            +  LQ    P+V T   L+ A  +   +  A  LL  M N G KP + TY +L++  C 
Sbjct: 182 LDRQLQKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICK 241

Query: 652 EARSPYDMGFCHELMAVSGHPA----HMFLLSMPSPGP--DGQNVRDHVGSFLEMMHSED 705
           E R    + F + + +    P     ++ L SM S G   D +         L  M  + 
Sbjct: 242 EGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAE-------KLLSDMLRKG 294

Query: 706 RESKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAV----------KEKGMSYWL 755
                   + +++FL + GL   A  + E        P+++          KEK M   +
Sbjct: 295 CSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAI 354

Query: 756 INLHVM 761
             L +M
Sbjct: 355 EYLDIM 360



 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 37/136 (27%), Positives = 71/136 (52%)

Query: 362 TYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQM 421
           TY T++  L +  +     KLLD+M R G +P+++TY+ L+    R   ++EA+  F  +
Sbjct: 406 TYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDL 465

Query: 422 QVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHL 481
           + +G  P+ +TY +++    K+   D A+D    M +    P   TY+++I  +   G  
Sbjct: 466 EGLGIRPNAITYNSIMLGLCKSRQTDRAIDFLAYMISKRCKPTEATYTILIEGIAYEGLA 525

Query: 482 QAAHQLFCEMVNQGCI 497
           + A  L  E+ ++G +
Sbjct: 526 KEALDLLNELCSRGLV 541



 Score = 55.1 bits (131), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 33/119 (27%), Positives = 57/119 (47%), Gaps = 1/119 (0%)

Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLI 402
           A+   + +RR+ G K D  TY+++V  L R  +     K    +   G +PN +TYN ++
Sbjct: 423 AIKLLDEMRRK-GLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNSIM 481

Query: 403 HSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGL 461
               ++   + A+D    M    C+P   TY  LI+  A  G    A+D+  ++ + GL
Sbjct: 482 LGLCKSRQTDRAIDFLAYMISKRCKPTEATYTILIEGIAYEGLAKEALDLLNELCSRGL 540


>gi|449515696|ref|XP_004164884.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
           mitochondrial-like [Cucumis sativus]
          Length = 657

 Score =  150 bits (379), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 107/389 (27%), Positives = 187/389 (48%), Gaps = 8/389 (2%)

Query: 362 TYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQM 421
           T+ T++  L +  +      L D+++  G  PNVV+YN +I  + R + +N A  V+K+M
Sbjct: 251 TFNTLLSWLCKEGKMNEACNLWDEVIAKGISPNVVSYNNIILGHCRKDNINAACKVYKEM 310

Query: 422 QVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHL 481
              G  P+ VT+  L+D + K G ++ A  ++ +M+ A + P   T  +II  L KAG  
Sbjct: 311 LDNGFTPNAVTFTILMDGYFKKGDIENAFSIFHRMKDANILPTDTTLGIIIKGLCKAGRS 370

Query: 482 QAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIV 541
                LF + V+QG +P  + YN +I    K  N   A  +YR+M   G  P  VTY+ +
Sbjct: 371 FEGRDLFNKFVSQGFVPTCMPYNTIIDGFIKEGNINLASNVYREMCEVGITPSTVTYTSL 430

Query: 542 MEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGL 601
           ++       +D A  +  +M+RK    D   YG L+D + K  +++ A E    +  AGL
Sbjct: 431 IDGFCKGNNIDLALKLLNDMKRKGLKMDIKAYGTLIDGFCKRRDMKSAHELLNELRGAGL 490

Query: 602 RPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEA-RSPYDMG 660
            PN    NS+++ F  +  + +A  L + M+N G+   L+TYT L+    ++ R  Y   
Sbjct: 491 SPNRFIYNSMITGFKNMNNVEEAIDLYKKMVNEGIPCDLKTYTSLIDGLLKSGRLLYASD 550

Query: 661 FCHELMAVSGHP---AHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRESKRGLVDAVV 717
              E+++    P   AH  L++        +N R      LE M+ ++      + + ++
Sbjct: 551 IHTEMLSKGILPDDRAHTVLINGLCNKGQFENAR----KILEDMNGKNMIPSVLIYNTLI 606

Query: 718 DFLHKSGLKEEAGSVWEVAAQKNVYPDAV 746
               K G  +EA  + +    + + PD +
Sbjct: 607 AGHFKEGNLQEAFRLHDEMLDRGLVPDNI 635



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 87/306 (28%), Positives = 143/306 (46%), Gaps = 1/306 (0%)

Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLI 402
           A   F+ ++       D      + G+    R F     L ++ V  G  P  + YN +I
Sbjct: 338 AFSIFHRMKDANILPTDTTLGIIIKGLCKAGRSFEG-RDLFNKFVSQGFVPTCMPYNTII 396

Query: 403 HSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLS 462
             + +   +N A +V+++M  VG  P  VTY +LID   K   +D+A+ +   M+  GL 
Sbjct: 397 DGFIKEGNINLASNVYREMCEVGITPSTVTYTSLIDGFCKGNNIDLALKLLNDMKRKGLK 456

Query: 463 PDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKL 522
            D   Y  +I+   K   +++AH+L  E+   G  PN   YN MI       N + A+ L
Sbjct: 457 MDIKAYGTLIDGFCKRRDMKSAHELLNELRGAGLSPNRFIYNSMITGFKNMNNVEEAIDL 516

Query: 523 YRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGK 582
           Y+ M N G   D  TY+ +++ L   G L  A  +  EM  K  +PD+  + +L++    
Sbjct: 517 YKKMVNEGIPCDLKTYTSLIDGLLKSGRLLYASDIHTEMLSKGILPDDRAHTVLINGLCN 576

Query: 583 AGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQT 642
            G    A +  E M    + P+V   N+L++   + G L +A+ L   ML+ GL P   T
Sbjct: 577 KGQFENARKILEDMNGKNMIPSVLIYNTLIAGHFKEGNLQEAFRLHDEMLDRGLVPDNIT 636

Query: 643 YTLLLS 648
           Y +L++
Sbjct: 637 YDILVN 642



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 85/333 (25%), Positives = 157/333 (47%), Gaps = 40/333 (12%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           R AG+   E T+T+++    +        +L D MV  G   N+     L+  Y     L
Sbjct: 102 RAAGWIPPEGTFTSVITACVKEGNVAEALRLKDDMVNCGKSMNLAVATSLMKGYCMQGNL 161

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLS--------- 462
             AL +  ++   G  P++VTY  LID   K G ++ A + Y +M+  G+          
Sbjct: 162 RSALVLVNEISESGLVPNKVTYSVLIDGCCKNGNIEKAFEFYSEMKTKGIRSSVYSLNSI 221

Query: 463 -------------------------PDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCI 497
                                     + FT++ +++ L K G +  A  L+ E++ +G  
Sbjct: 222 LEGYLKCQSWQNAFTMFNDALESGLANVFTFNTLLSWLCKEGKMNEACNLWDEVIAKGIS 281

Query: 498 PNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAV 557
           PN+V+YN +I    +  N  +A K+Y++M + GF P+ VT++I+M+     G ++ A ++
Sbjct: 282 PNVVSYNNIILGHCRKDNINAACKVYKEMLDNGFTPNAVTFTILMDGYFKKGDIENAFSI 341

Query: 558 FAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTC---NSLLSA 614
           F  M+  N +P +   G+++    KAG   +  + +   +  G    VPTC   N+++  
Sbjct: 342 FHRMKDANILPTDTTLGIIIKGLCKAGRSFEGRDLFNKFVSQGF---VPTCMPYNTIIDG 398

Query: 615 FLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
           F++ G ++ A ++ + M  +G+ PS  TYT L+
Sbjct: 399 FIKEGNINLASNVYREMCEVGITPSTVTYTSLI 431



 Score =  117 bits (292), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 65/201 (32%), Positives = 111/201 (55%), Gaps = 1/201 (0%)

Query: 342 VALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRL 401
           +AL   N ++R+ G K D   Y T++    + R   + ++LL+++   G  PN   YN +
Sbjct: 442 LALKLLNDMKRK-GLKMDIKAYGTLIDGFCKRRDMKSAHELLNELRGAGLSPNRFIYNSM 500

Query: 402 IHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGL 461
           I  +   N + EA+D++K+M   G   D  TY +LID   K+G L  A D++ +M + G+
Sbjct: 501 ITGFKNMNNVEEAIDLYKKMVNEGIPCDLKTYTSLIDGLLKSGRLLYASDIHTEMLSKGI 560

Query: 462 SPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALK 521
            PD   ++V+IN L   G  + A ++  +M  +  IP+++ YN +IA   K  N Q A +
Sbjct: 561 LPDDRAHTVLINGLCNKGQFENARKILEDMNGKNMIPSVLIYNTLIAGHFKEGNLQEAFR 620

Query: 522 LYRDMQNAGFEPDKVTYSIVM 542
           L+ +M + G  PD +TY I++
Sbjct: 621 LHDEMLDRGLVPDNITYDILV 641



 Score = 96.7 bits (239), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 75/264 (28%), Positives = 121/264 (45%), Gaps = 4/264 (1%)

Query: 393 PNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDM 452
           P++   N L+ +  R N   EA ++  +M +VG   D  T   ++    K G +  A   
Sbjct: 3   PSIQCMNILLTAMVRKNMTCEARELHNKMLLVGVTGDCFTLHVMLRACLKEGNILEAEQH 62

Query: 453 YKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAK 512
           + + +A G+  D   YS+ ++ L    +   A  L  EM   G IP   T+  +I    K
Sbjct: 63  FLQAKARGVELDQEAYSIFVHLLCLKPNSGYALSLLREMRAAGWIPPEGTFTSVITACVK 122

Query: 513 ARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHC--GYLDEAEAVFAEMRRKNWVPDE 570
             N   AL+L  DM N G   +    + +M+  G+C  G L  A  +  E+     VP++
Sbjct: 123 EGNVAEALRLKDDMVNCGKSMNLAVATSLMK--GYCMQGNLRSALVLVNEISESGLVPNK 180

Query: 571 PVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQG 630
             Y +L+D   K GN+ KA+E+Y  M   G+R +V + NS+L  +L+     +A+ +   
Sbjct: 181 VTYSVLIDGCCKNGNIEKAFEFYSEMKTKGIRSSVYSLNSILEGYLKCQSWQNAFTMFND 240

Query: 631 MLNLGLKPSLQTYTLLLSCCTEAR 654
            L  GL       TLL   C E +
Sbjct: 241 ALESGLANVFTFNTLLSWLCKEGK 264



 Score = 89.7 bits (221), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 69/305 (22%), Positives = 141/305 (46%), Gaps = 2/305 (0%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           +  G + D+  Y+  V +L      G    LL +M   G  P   T+  +I +  +   +
Sbjct: 67  KARGVELDQEAYSIFVHLLCLKPNSGYALSLLREMRAAGWIPPEGTFTSVITACVKEGNV 126

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
            EAL +   M   G   +     +L+  +   G L  A+ +  ++  +GL P+  TYSV+
Sbjct: 127 AEALRLKDDMVNCGKSMNLAVATSLMKGYCMQGNLRSALVLVNEISESGLVPNKVTYSVL 186

Query: 472 INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF 531
           I+   K G+++ A + + EM  +G   ++ + N ++    K +++Q+A  ++ D   +G 
Sbjct: 187 IDGCCKNGNIEKAFEFYSEMKTKGIRSSVYSLNSILEGYLKCQSWQNAFTMFNDALESGL 246

Query: 532 EPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWE 591
             +  T++ ++  L   G ++EA  ++ E+  K   P+   Y  ++    +  N+  A +
Sbjct: 247 -ANVFTFNTLLSWLCKEGKMNEACNLWDEVIAKGISPNVVSYNNIILGHCRKDNINAACK 305

Query: 592 WYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS-CC 650
            Y+ ML  G  PN  T   L+  + + G + +A+ +   M +  + P+  T  +++   C
Sbjct: 306 VYKEMLDNGFTPNAVTFTILMDGYFKKGDIENAFSIFHRMKDANILPTDTTLGIIIKGLC 365

Query: 651 TEARS 655
              RS
Sbjct: 366 KAGRS 370



 Score = 84.0 bits (206), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 70/273 (25%), Positives = 139/273 (50%), Gaps = 6/273 (2%)

Query: 381 KLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIH 440
           +L ++M+  G   +  T + ++ +  +   + EA   F Q +  G E D+  Y   + + 
Sbjct: 26  ELHNKMLLVGVTGDCFTLHVMLRACLKEGNILEAEQHFLQAKARGVELDQEAYSIFVHLL 85

Query: 441 AKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNL 500
                   A+ + ++M+AAG  P   T++ +I    K G++  A +L  +MVN G   NL
Sbjct: 86  CLKPNSGYALSLLREMRAAGWIPPEGTFTSVITACVKEGNVAEALRLKDDMVNCGKSMNL 145

Query: 501 VTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAE 560
                ++       N +SAL L  ++  +G  P+KVTYS++++     G +++A   ++E
Sbjct: 146 AVATSLMKGYCMQGNLRSALVLVNEISESGLVPNKVTYSVLIDGCCKNGNIEKAFEFYSE 205

Query: 561 MRRKNWVPDEPVYGL--LVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRV 618
           M+ K       VY L  +++ + K  + + A+  +   L++GL  NV T N+LLS   + 
Sbjct: 206 MKTKGI--RSSVYSLNSILEGYLKCQSWQNAFTMFNDALESGL-ANVFTFNTLLSWLCKE 262

Query: 619 GQLSDAYHLLQGMLNLGLKPSLQTY-TLLLSCC 650
           G++++A +L   ++  G+ P++ +Y  ++L  C
Sbjct: 263 GKMNEACNLWDEVIAKGISPNVVSYNNIILGHC 295


>gi|255660808|gb|ACU25573.1| pentatricopeptide repeat-containing protein [Glandularia subincana]
          Length = 418

 Score =  150 bits (379), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 85/279 (30%), Positives = 153/279 (54%)

Query: 370 LGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPD 429
           L + + F  +    ++ +  G   ++  +N L+HS+ +   +  A  VF  +   G  P 
Sbjct: 111 LMKLKYFKLVWGFYEESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPS 170

Query: 430 RVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFC 489
            V++ TL++ + K G LD    +   MQA+G+ PD +TYSV+IN L K   +  A++LF 
Sbjct: 171 VVSFNTLMNGYIKLGDLDEGFRLKNXMQASGVQPDVYTYSVLINGLCKESKMDDANELFD 230

Query: 490 EMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCG 549
           EM++ G +PN VT+  +I    K      A+++Y+ M +    PD +TY+ ++  L   G
Sbjct: 231 EMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKG 290

Query: 550 YLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCN 609
            L +A+ +  EM  K   PD+  Y  L+D   K G++  A+E+ + M++  +R +     
Sbjct: 291 DLKQAQDLTDEMSMKGLKPDKITYTTLIDGSCKEGHLETAFEYRKRMIKENIRLDDVAYT 350

Query: 610 SLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
           +L+S   + G+  DA  +L+ ML++GLKP + TYT++++
Sbjct: 351 ALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIIN 389



 Score =  124 bits (310), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 80/316 (25%), Positives = 155/316 (49%), Gaps = 10/316 (3%)

Query: 335 KQLQDHTVALGFFNWL------RRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVR 388
           +++ +H + L +F  +        + G+    + +  ++    +  +      + D + +
Sbjct: 105 RKVJEHLMKLKYFKLVWGFYEESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITK 164

Query: 389 DGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDV 448
            G +P+VV++N L++ Y +   L+E   +   MQ  G +PD  TY  LI+   K   +D 
Sbjct: 165 WGLRPSVVSFNTLMNGYIKLGDLDEGFRLKNXMQASGVQPDVYTYSVLINGLCKESKMDD 224

Query: 449 AMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIA 508
           A +++ +M   GL P+  T++ +I+   K G +  A +++ +M++Q   P+L+TYN +I 
Sbjct: 225 ANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIY 284

Query: 509 LQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHC--GYLDEAEAVFAEMRRKNW 566
              K  + + A  L  +M   G +PDK+TY+ +++  G C  G+L+ A      M ++N 
Sbjct: 285 GLCKKGDLKQAQDLTDEMSMKGLKPDKITYTTLID--GSCKEGHLETAFEYRKRMIKENI 342

Query: 567 VPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYH 626
             D+  Y  L+    + G    A +    ML  GL+P + T   +++ F + G +     
Sbjct: 343 RLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSK 402

Query: 627 LLQGMLNLGLKPSLQT 642
           LL+ M   G  PS+ T
Sbjct: 403 LLKEMQRDGYVPSVVT 418



 Score = 57.4 bits (137), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 36/159 (22%), Positives = 79/159 (49%), Gaps = 1/159 (0%)

Query: 497 IPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEA 556
           I ++  ++ +I    ++   + A++ YR  +   F     T   V+E L    Y      
Sbjct: 63  ISDIYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVJEHLMKLKYFKLVWG 122

Query: 557 VFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFL 616
            + E     +      + +L+  + K G +R A   ++A+ + GLRP+V + N+L++ ++
Sbjct: 123 FYEESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYI 182

Query: 617 RVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS-CCTEAR 654
           ++G L + + L   M   G++P + TY++L++  C E++
Sbjct: 183 KLGDLDEGFRLKNXMQASGVQPDVYTYSVLINGLCKESK 221


>gi|357499777|ref|XP_003620177.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495192|gb|AES76395.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 612

 Score =  150 bits (379), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 104/373 (27%), Positives = 177/373 (47%), Gaps = 11/373 (2%)

Query: 329 QANQVLKQLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVR 388
           Q +Q L    D  VALGF            ++  Y T++  L +  Q  A  +LL ++  
Sbjct: 141 QIHQAL-HFHDKVVALGF----------HLNKVCYGTLINGLCKVGQTSAALQLLRRVDG 189

Query: 389 DGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDV 448
              QPNVV YN +I S  +   +NEA D++ +M   G  PD VTY  LI      G L+ 
Sbjct: 190 KLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKGISPDVVTYSALISGFCILGKLND 249

Query: 449 AMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIA 508
           A+ ++ KM +  ++PD +T+S++++   K G ++ A  +   M+ QG  P++VTY  ++ 
Sbjct: 250 AIGLFNKMISEEINPDVYTFSILVDGFCKEGRVKEAKNVLAMMMKQGIKPDVVTYCSLMD 309

Query: 509 LQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVP 568
                +    A  ++  M   G   +  +Y+I++        +DEA  +F EM  KN +P
Sbjct: 310 GYCLVKQVNKAKSIFNTMAQGGVTANVQSYNIMINGFCKIKKVDEAMNLFKEMHCKNIIP 369

Query: 569 DEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLL 628
           D   Y  L+D   K+G +  A +  + M   G+  +  T NS+L A  +  Q+  A  LL
Sbjct: 370 DVVTYNSLIDGLCKSGKISYALKLVDEMHDRGVPHDKITYNSILDALCKNHQVDKAIALL 429

Query: 629 QGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGFCHELMAVSGHPAHMFLLSMPSPGPDGQ 688
             M + G++P + TYT+L+    +     D     E + V G+   ++  ++   G    
Sbjct: 430 TKMKDEGIQPDMYTYTILIDGLCKGGRLKDAQNIFEDLLVKGYNITVYTYTVMIQGFCDN 489

Query: 689 NVRDHVGSFLEMM 701
           ++ D   + L  M
Sbjct: 490 DLFDKALALLSKM 502



 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 85/296 (28%), Positives = 149/296 (50%), Gaps = 6/296 (2%)

Query: 355 GFKHDEHTYTTMVG---ILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           G   D  TY+ ++    ILG+     AI  L ++M+ +   P+V T++ L+  + +   +
Sbjct: 226 GISPDVVTYSALISGFCILGKLND--AIG-LFNKMISEEINPDVYTFSILVDGFCKEGRV 282

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
            EA +V   M   G +PD VTYC+L+D +     ++ A  ++  M   G++ +  +Y+++
Sbjct: 283 KEAKNVLAMMMKQGIKPDVVTYCSLMDGYCLVKQVNKAKSIFNTMAQGGVTANVQSYNIM 342

Query: 472 INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF 531
           IN   K   +  A  LF EM  +  IP++VTYN +I    K+     ALKL  +M + G 
Sbjct: 343 INGFCKIKKVDEAMNLFKEMHCKNIIPDVVTYNSLIDGLCKSGKISYALKLVDEMHDRGV 402

Query: 532 EPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWE 591
             DK+TY+ +++ L     +D+A A+  +M+ +   PD   Y +L+D   K G ++ A  
Sbjct: 403 PHDKITYNSILDALCKNHQVDKAIALLTKMKDEGIQPDMYTYTILIDGLCKGGRLKDAQN 462

Query: 592 WYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
            +E +L  G    V T   ++  F        A  LL  M + G  P+ +TY +++
Sbjct: 463 IFEDLLVKGYNITVYTYTVMIQGFCDNDLFDKALALLSKMEDNGCIPNAKTYEIII 518



 Score =  125 bits (314), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 80/286 (27%), Positives = 142/286 (49%)

Query: 363 YTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQ 422
           +  ++G L +   +     L  +M  +G   ++VT+N LI+ + +  + + +  VF  + 
Sbjct: 59  FGKILGSLVKINCYQTAISLHREMEFNGIASDLVTFNILINCFSQLGHTHFSFSVFANIL 118

Query: 423 VVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQ 482
             G EP+ +T  TLI      G +  A+  + K+ A G   +   Y  +IN L K G   
Sbjct: 119 KKGYEPNAITLTTLIKGLCLKGQIHQALHFHDKVVALGFHLNKVCYGTLINGLCKVGQTS 178

Query: 483 AAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVM 542
           AA QL   +  +   PN+V YN +I    K +    A  LY +M + G  PD VTYS ++
Sbjct: 179 AALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKGISPDVVTYSALI 238

Query: 543 EVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLR 602
                 G L++A  +F +M  +   PD   + +LVD + K G V++A      M++ G++
Sbjct: 239 SGFCILGKLNDAIGLFNKMISEEINPDVYTFSILVDGFCKEGRVKEAKNVLAMMMKQGIK 298

Query: 603 PNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
           P+V T  SL+  +  V Q++ A  +   M   G+  ++Q+Y ++++
Sbjct: 299 PDVVTYCSLMDGYCLVKQVNKAKSIFNTMAQGGVTANVQSYNIMIN 344



 Score =  116 bits (291), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 85/350 (24%), Positives = 161/350 (46%), Gaps = 2/350 (0%)

Query: 386 MVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGF 445
           +++ G +PN +T   LI        +++AL    ++  +G   ++V Y TLI+   K G 
Sbjct: 117 ILKKGYEPNAITLTTLIKGLCLKGQIHQALHFHDKVVALGFHLNKVCYGTLINGLCKVGQ 176

Query: 446 LDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNI 505
              A+ + +++    + P+   Y+ II+ + K   +  A  L+ EMV++G  P++VTY+ 
Sbjct: 177 TSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKGISPDVVTYSA 236

Query: 506 MIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKN 565
           +I+          A+ L+  M +    PD  T+SI+++     G + EA+ V A M ++ 
Sbjct: 237 LISGFCILGKLNDAIGLFNKMISEEINPDVYTFSILVDGFCKEGRVKEAKNVLAMMMKQG 296

Query: 566 WVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAY 625
             PD   Y  L+D +     V KA   +  M Q G+  NV + N +++ F ++ ++ +A 
Sbjct: 297 IKPDVVTYCSLMDGYCLVKQVNKAKSIFNTMAQGGVTANVQSYNIMINGFCKIKKVDEAM 356

Query: 626 HLLQGMLNLGLKPSLQTY-TLLLSCCTEARSPYDMGFCHELMAVSGHPAHMFLLSMPSPG 684
           +L + M    + P + TY +L+   C   +  Y +    E M   G P      +     
Sbjct: 357 NLFKEMHCKNIIPDVVTYNSLIDGLCKSGKISYALKLVDE-MHDRGVPHDKITYNSILDA 415

Query: 685 PDGQNVRDHVGSFLEMMHSEDRESKRGLVDAVVDFLHKSGLKEEAGSVWE 734
               +  D   + L  M  E  +        ++D L K G  ++A +++E
Sbjct: 416 LCKNHQVDKAIALLTKMKDEGIQPDMYTYTILIDGLCKGGRLKDAQNIFE 465



 Score = 96.3 bits (238), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 60/255 (23%), Positives = 120/255 (47%)

Query: 393 PNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDM 452
           P +  + +++ S  + N    A+ + ++M+  G   D VT+  LI+  ++ G    +  +
Sbjct: 54  PPIFEFGKILGSLVKINCYQTAISLHREMEFNGIASDLVTFNILINCFSQLGHTHFSFSV 113

Query: 453 YKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAK 512
           +  +   G  P+  T + +I  L   G +  A     ++V  G   N V Y  +I    K
Sbjct: 114 FANILKKGYEPNAITLTTLIKGLCLKGQIHQALHFHDKVVALGFHLNKVCYGTLINGLCK 173

Query: 513 ARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPV 572
                +AL+L R +     +P+ V Y+ +++ +     ++EA  +++EM  K   PD   
Sbjct: 174 VGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKGISPDVVT 233

Query: 573 YGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGML 632
           Y  L+  +   G +  A   +  M+   + P+V T + L+  F + G++ +A ++L  M+
Sbjct: 234 YSALISGFCILGKLNDAIGLFNKMISEEINPDVYTFSILVDGFCKEGRVKEAKNVLAMMM 293

Query: 633 NLGLKPSLQTYTLLL 647
             G+KP + TY  L+
Sbjct: 294 KQGIKPDVVTYCSLM 308



 Score = 95.9 bits (237), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 67/237 (28%), Positives = 115/237 (48%), Gaps = 7/237 (2%)

Query: 325 MDAYQANQVLKQLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLD 384
           MD Y    ++KQ+     A   FN +  Q G   +  +Y  M+    + ++      L  
Sbjct: 308 MDGYC---LVKQVNK---AKSIFNTMA-QGGVTANVQSYNIMINGFCKIKKVDEAMNLFK 360

Query: 385 QMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAG 444
           +M      P+VVTYN LI    ++  ++ AL +  +M   G   D++TY +++D   K  
Sbjct: 361 EMHCKNIIPDVVTYNSLIDGLCKSGKISYALKLVDEMHDRGVPHDKITYNSILDALCKNH 420

Query: 445 FLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYN 504
            +D A+ +  KM+  G+ PD +TY+++I+ L K G L+ A  +F +++ +G    + TY 
Sbjct: 421 QVDKAIALLTKMKDEGIQPDMYTYTILIDGLCKGGRLKDAQNIFEDLLVKGYNITVYTYT 480

Query: 505 IMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEM 561
           +MI        +  AL L   M++ G  P+  TY I++  L      D AE +  EM
Sbjct: 481 VMIQGFCDNDLFDKALALLSKMEDNGCIPNAKTYEIIILSLFEKDENDMAEKLLREM 537



 Score = 73.9 bits (180), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 64/285 (22%), Positives = 126/285 (44%), Gaps = 35/285 (12%)

Query: 462 SPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALK 521
           +P  F +  I+  L K    Q A  L  EM   G   +LVT+NI+I   ++  +   +  
Sbjct: 53  TPPIFEFGKILGSLVKINCYQTAISLHREMEFNGIASDLVTFNILINCFSQLGHTHFSFS 112

Query: 522 LYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWG 581
           ++ ++   G+EP+ +T + +++ L   G + +A     ++    +  ++  YG L++   
Sbjct: 113 VFANILKKGYEPNAITLTTLIKGLCLKGQIHQALHFHDKVVALGFHLNKVCYGTLINGLC 172

Query: 582 KAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQ 641
           K G    A +    +    ++PNV   N+++ +  +V  +++A+ L   M++ G+ P + 
Sbjct: 173 KVGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKGISPDVV 232

Query: 642 TYTLLLSCCTEARSPYDMGFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMM 701
           TY+ L+S           GFC     + G                   + D +G F +M+
Sbjct: 233 TYSALIS-----------GFC-----ILG------------------KLNDAIGLFNKMI 258

Query: 702 HSEDRESKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAV 746
            SE+          +VD   K G  +EA +V  +  ++ + PD V
Sbjct: 259 -SEEINPDVYTFSILVDGFCKEGRVKEAKNVLAMMMKQGIKPDVV 302



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 41/143 (28%), Positives = 67/143 (46%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           G  HD+ TY +++  L +  Q      LL +M  +G QP++ TY  LI    +   L +A
Sbjct: 401 GVPHDKITYNSILDALCKNHQVDKAIALLTKMKDEGIQPDMYTYTILIDGLCKGGRLKDA 460

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
            ++F+ + V G      TY  +I         D A+ +  KM+  G  P+  TY +II  
Sbjct: 461 QNIFEDLLVKGYNITVYTYTVMIQGFCDNDLFDKALALLSKMEDNGCIPNAKTYEIIILS 520

Query: 475 LGKAGHLQAAHQLFCEMVNQGCI 497
           L +      A +L  EM+ +G +
Sbjct: 521 LFEKDENDMAEKLLREMIARGLL 543


>gi|449435168|ref|XP_004135367.1| PREDICTED: pentatricopeptide repeat-containing protein At5g04810,
           chloroplastic-like [Cucumis sativus]
          Length = 962

 Score =  150 bits (378), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 83/318 (26%), Positives = 163/318 (51%)

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
            AG KH+  TY+ ++    + + +     + + +++DG +P+VV YN +I ++     ++
Sbjct: 514 HAGIKHNMKTYSMLINGFLKLKDWANAFAIFEDLIKDGIKPDVVLYNNIITAFCGMGKMD 573

Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
            A+   K+MQ    +P   T+  +I   A+ G +  A+D++  M+ +G  P   TY+ +I
Sbjct: 574 RAVCTVKEMQKQRHKPTTRTFMPIIHGFARKGEMKKALDVFDMMRMSGCIPTVHTYNALI 633

Query: 473 NCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFE 532
             L +   ++ A Q+  EM   G  PN  TY  ++   A   +   A   +  +++ G +
Sbjct: 634 LGLVEKRKMEKAEQILDEMTLAGVSPNEHTYTTIMHGYASLGDTGKAFTYFTKLRDEGLQ 693

Query: 533 PDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEW 592
            D  TY  +++     G +  A AV  EM  +N   +  +Y +L+D W + G++ +A + 
Sbjct: 694 LDVYTYEALLKACCKSGRMQSALAVTKEMSAQNIPRNTFIYNILIDGWARRGDIWEAADL 753

Query: 593 YEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTE 652
            + M + G++P++ T  S ++A  + G +  A   ++ M ++G+KP+++TYT L++    
Sbjct: 754 MQQMKREGVQPDIHTYTSFINACSKAGDMQRATKTIEEMKSVGVKPNVKTYTTLINGWAR 813

Query: 653 ARSPYDMGFCHELMAVSG 670
           A  P     C E M +SG
Sbjct: 814 ASLPEKALSCFEEMKLSG 831



 Score =  116 bits (290), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 77/263 (29%), Positives = 121/263 (46%), Gaps = 4/263 (1%)

Query: 357 KHDEHTYTTMVGILGRARQFGAINKLLD---QMVRDGCQPNVVTYNRLIHSYGRANYLNE 413
           +H   T T M  I G AR+ G + K LD    M   GC P V TYN LI        + +
Sbjct: 586 RHKPTTRTFMPIIHGFARK-GEMKKALDVFDMMRMSGCIPTVHTYNALILGLVEKRKMEK 644

Query: 414 ALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIIN 473
           A  +  +M + G  P+  TY T++  +A  G    A   + K++  GL  D +TY  ++ 
Sbjct: 645 AEQILDEMTLAGVSPNEHTYTTIMHGYASLGDTGKAFTYFTKLRDEGLQLDVYTYEALLK 704

Query: 474 CLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEP 533
              K+G +Q+A  +  EM  Q    N   YNI+I   A+  +   A  L + M+  G +P
Sbjct: 705 ACCKSGRMQSALAVTKEMSAQNIPRNTFIYNILIDGWARRGDIWEAADLMQQMKREGVQP 764

Query: 534 DKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWY 593
           D  TY+  +      G +  A     EM+     P+   Y  L++ W +A    KA   +
Sbjct: 765 DIHTYTSFINACSKAGDMQRATKTIEEMKSVGVKPNVKTYTTLINGWARASLPEKALSCF 824

Query: 594 EAMLQAGLRPNVPTCNSLLSAFL 616
           E M  +GL+P+    + L+++ L
Sbjct: 825 EEMKLSGLKPDRAVYHCLMTSLL 847



 Score =  114 bits (286), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 65/296 (21%), Positives = 142/296 (47%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           ++ G +    TY+ +V    +     + +    +        N + Y  +I++Y +   +
Sbjct: 373 KEEGIEMSLVTYSILVSGFAKTGNAESADHWFQEAKEKHSSLNAIIYGNIIYAYCQRCNM 432

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
           ++A  + ++M+  G +     Y T++D +   G  D  + ++++ +  GL+P   TY  +
Sbjct: 433 DKAEALVREMEEEGIDAPIDIYHTMMDGYTMVGDEDKCLLVFERFKECGLNPSVITYGCL 492

Query: 472 INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF 531
           IN   K G +  A ++  EM + G   N+ TY+++I    K +++ +A  ++ D+   G 
Sbjct: 493 INLYAKLGKVSKALEVSKEMEHAGIKHNMKTYSMLINGFLKLKDWANAFAIFEDLIKDGI 552

Query: 532 EPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWE 591
           +PD V Y+ ++      G +D A     EM+++   P    +  ++  + + G ++KA +
Sbjct: 553 KPDVVLYNNIITAFCGMGKMDRAVCTVKEMQKQRHKPTTRTFMPIIHGFARKGEMKKALD 612

Query: 592 WYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
            ++ M  +G  P V T N+L+   +   ++  A  +L  M   G+ P+  TYT ++
Sbjct: 613 VFDMMRMSGCIPTVHTYNALILGLVEKRKMEKAEQILDEMTLAGVSPNEHTYTTIM 668



 Score =  114 bits (285), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 96/414 (23%), Positives = 182/414 (43%), Gaps = 20/414 (4%)

Query: 382 LLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHA 441
           L+ +M  +G    +  Y+ ++  Y      ++ L VF++ +  G  P  +TY  LI+++A
Sbjct: 438 LVREMEEEGIDAPIDIYHTMMDGYTMVGDEDKCLLVFERFKECGLNPSVITYGCLINLYA 497

Query: 442 KAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLV 501
           K G +  A+++ K+M+ AG+  +  TYS++IN   K      A  +F +++  G  P++V
Sbjct: 498 KLGKVSKALEVSKEMEHAGIKHNMKTYSMLINGFLKLKDWANAFAIFEDLIKDGIKPDVV 557

Query: 502 TYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEM 561
            YN +I           A+   ++MQ    +P   T+  ++      G + +A  VF  M
Sbjct: 558 LYNNIITAFCGMGKMDRAVCTVKEMQKQRHKPTTRTFMPIIHGFARKGEMKKALDVFDMM 617

Query: 562 RRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQL 621
           R    +P    Y  L+    +   + KA +  + M  AG+ PN  T  +++  +  +G  
Sbjct: 618 RMSGCIPTVHTYNALILGLVEKRKMEKAEQILDEMTLAGVSPNEHTYTTIMHGYASLGDT 677

Query: 622 SDAYHLLQGMLNLGLKPSLQTYTLLL-SCCTEARSPYDMGFCHELMAVSGHPAHMFLLSM 680
             A+     + + GL+  + TY  LL +CC   R    +    E M+    P + F+ ++
Sbjct: 678 GKAFTYFTKLRDEGLQLDVYTYEALLKACCKSGRMQSALAVTKE-MSAQNIPRNTFIYNI 736

Query: 681 PSPGPDGQNVRDHVGSFLEMMHSEDRESKRGLVDAVVDFLH---KSGLKEEAGSVWEVAA 737
                DG   R  +    ++M    RE  +  +     F++   K+G  + A    E   
Sbjct: 737 L---IDGWARRGDIWEAADLMQQMKREGVQPDIHTYTSFINACSKAGDMQRATKTIEEMK 793

Query: 738 QKNVYPDAVKEKGMSYWLINLHVMSDGTAVIAL-SRTLAWFRKQMLISGVGPSR 790
              V P+          +     + +G A  +L  + L+ F ++M +SG+ P R
Sbjct: 794 SVGVKPN----------VKTYTTLINGWARASLPEKALSCF-EEMKLSGLKPDR 836



 Score =  113 bits (283), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 65/257 (25%), Positives = 125/257 (48%)

Query: 392 QPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMD 451
           +P+   Y  +++ Y R   ++ A + F++M+  G EP    Y  LI  +A    ++ A+ 
Sbjct: 308 KPSRKEYGLMVNYYTRRGDMHRARETFEKMRARGIEPSSHVYTNLIHAYAVGRDMEEALS 367

Query: 452 MYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQA 511
             +KM+  G+     TYS++++   K G+ ++A   F E   +    N + Y  +I    
Sbjct: 368 CVRKMKEEGIEMSLVTYSILVSGFAKTGNAESADHWFQEAKEKHSSLNAIIYGNIIYAYC 427

Query: 512 KARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEP 571
           +  N   A  L R+M+  G +     Y  +M+     G  D+   VF   +     P   
Sbjct: 428 QRCNMDKAEALVREMEEEGIDAPIDIYHTMMDGYTMVGDEDKCLLVFERFKECGLNPSVI 487

Query: 572 VYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGM 631
            YG L++L+ K G V KA E  + M  AG++ N+ T + L++ FL++   ++A+ + + +
Sbjct: 488 TYGCLINLYAKLGKVSKALEVSKEMEHAGIKHNMKTYSMLINGFLKLKDWANAFAIFEDL 547

Query: 632 LNLGLKPSLQTYTLLLS 648
           +  G+KP +  Y  +++
Sbjct: 548 IKDGIKPDVVLYNNIIT 564



 Score =  106 bits (265), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 65/235 (27%), Positives = 114/235 (48%), Gaps = 1/235 (0%)

Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLI 402
           AL  F+ +R  +G     HTY  ++  L   R+     ++LD+M   G  PN  TY  ++
Sbjct: 610 ALDVFDMMR-MSGCIPTVHTYNALILGLVEKRKMEKAEQILDEMTLAGVSPNEHTYTTIM 668

Query: 403 HSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLS 462
           H Y       +A   F +++  G + D  TY  L+    K+G +  A+ + K+M A  + 
Sbjct: 669 HGYASLGDTGKAFTYFTKLRDEGLQLDVYTYEALLKACCKSGRMQSALAVTKEMSAQNIP 728

Query: 463 PDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKL 522
            +TF Y+++I+   + G +  A  L  +M  +G  P++ TY   I   +KA + Q A K 
Sbjct: 729 RNTFIYNILIDGWARRGDIWEAADLMQQMKREGVQPDIHTYTSFINACSKAGDMQRATKT 788

Query: 523 YRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLV 577
             +M++ G +P+  TY+ ++         ++A + F EM+     PD  VY  L+
Sbjct: 789 IEEMKSVGVKPNVKTYTTLINGWARASLPEKALSCFEEMKLSGLKPDRAVYHCLM 843



 Score = 95.5 bits (236), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 66/285 (23%), Positives = 129/285 (45%), Gaps = 6/285 (2%)

Query: 363 YTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQ 422
           Y T  G + RAR+        ++M   G +P+   Y  LIH+Y     + EAL   ++M+
Sbjct: 320 YYTRRGDMHRARE------TFEKMRARGIEPSSHVYTNLIHAYAVGRDMEEALSCVRKMK 373

Query: 423 VVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQ 482
             G E   VTY  L+   AK G  + A   +++ +    S +   Y  II    +  ++ 
Sbjct: 374 EEGIEMSLVTYSILVSGFAKTGNAESADHWFQEAKEKHSSLNAIIYGNIIYAYCQRCNMD 433

Query: 483 AAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVM 542
            A  L  EM  +G    +  Y+ M+       +    L ++   +  G  P  +TY  ++
Sbjct: 434 KAEALVREMEEEGIDAPIDIYHTMMDGYTMVGDEDKCLLVFERFKECGLNPSVITYGCLI 493

Query: 543 EVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLR 602
            +    G + +A  V  EM       +   Y +L++ + K  +   A+  +E +++ G++
Sbjct: 494 NLYAKLGKVSKALEVSKEMEHAGIKHNMKTYSMLINGFLKLKDWANAFAIFEDLIKDGIK 553

Query: 603 PNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
           P+V   N++++AF  +G++  A   ++ M     KP+ +T+  ++
Sbjct: 554 PDVVLYNNIITAFCGMGKMDRAVCTVKEMQKQRHKPTTRTFMPII 598


>gi|242061252|ref|XP_002451915.1| hypothetical protein SORBIDRAFT_04g009890 [Sorghum bicolor]
 gi|241931746|gb|EES04891.1| hypothetical protein SORBIDRAFT_04g009890 [Sorghum bicolor]
          Length = 571

 Score =  150 bits (378), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 96/369 (26%), Positives = 176/369 (47%), Gaps = 37/369 (10%)

Query: 289 RHFASTGNVVESVSRILRQWKWGPLAEEALGNTNYSMDAYQANQVLKQLQDHTVALGFFN 348
           R+  S   + E   RIL+ +KWGP AE+AL      +D +   +++K      V + FF 
Sbjct: 52  RYTHSVRVLDERFIRILKIFKWGPDAEKALEVLMLRVDHWLVREIMKTDIGVNVKMQFFR 111

Query: 349 WLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDG-CQPNVVTYNRLIHSYGR 407
           W  ++  ++HD  TY  ++  L    Q+G + K++ +MVR+  C       + ++   G 
Sbjct: 112 WAAKRRNYEHDTSTYMALIHCLEVVEQYGEMWKMIQEMVRNPICVVTPTELSEVVRMLGN 171

Query: 408 ANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFT 467
           A  +++A+ +F Q++   C+P            A+A                        
Sbjct: 172 AKMVSKAIAIFYQIKTRKCQPT-----------AQA------------------------ 196

Query: 468 YSVIINCLGKAGHLQAAHQLFCEMVNQG-CIPNLVTYNIMIALQAKARNYQSALKLYRDM 526
           Y+ +I  L   G  +  H+L+ EM  +G C P+ +TY+ +I+   K     SA++L  +M
Sbjct: 197 YNSMIIMLMHEGQYEKVHELYNEMSTEGHCFPDTMTYSALISAFCKLGRRDSAIQLLNEM 256

Query: 527 QNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNV 586
           ++ G +P    Y++++ +      +  A ++F EMR +   PD   Y  L+   GKAG +
Sbjct: 257 KDNGMQPTTKIYTMLVALFFKLNDVHGALSLFEEMRHQYCRPDVFTYTELIRGLGKAGRI 316

Query: 587 RKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLL 646
            +A+ ++  M + G RP+    N++++   + G+L DA  L Q M  L   PS+ TY  +
Sbjct: 317 DEAYHFFYEMQREGCRPDTIVMNNMINFLGKAGRLDDAMKLFQEMGTLRCIPSVVTYNTI 376

Query: 647 LSCCTEARS 655
           +    E++S
Sbjct: 377 IKALFESKS 385



 Score =  143 bits (360), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 93/326 (28%), Positives = 151/326 (46%), Gaps = 36/326 (11%)

Query: 359 DEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVF 418
           D  TY+ ++    +  +  +  +LL++M  +G QP    Y  L+  + + N ++ AL +F
Sbjct: 229 DTMTYSALISAFCKLGRRDSAIQLLNEMKDNGMQPTTKIYTMLVALFFKLNDVHGALSLF 288

Query: 419 KQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKA 478
           ++M+   C PD  TY  LI    KAG +D A   + +MQ  G  PDT   + +IN LGKA
Sbjct: 289 EEMRHQYCRPDVFTYTELIRGLGKAGRIDEAYHFFYEMQREGCRPDTIVMNNMINFLGKA 348

Query: 479 GHLQAAHQLFCEMVNQGCIPNLVTYNIMIA--LQAKAR---------------------- 514
           G L  A +LF EM    CIP++VTYN +I    ++K+R                      
Sbjct: 349 GRLDDAMKLFQEMGTLRCIPSVVTYNTIIKALFESKSRASEVPSWFERMKESGISPSSFT 408

Query: 515 ------------NYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMR 562
                         + A+ L  +M   GF P    Y  +++ LG     D A  +F E++
Sbjct: 409 YSILIDGFCKTNRMEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLACELFQELK 468

Query: 563 RKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLS 622
                    VY +++   GKAG +  A   ++ M + G  P+V   N+L+S   R G L 
Sbjct: 469 ENCGSSSSRVYAVMIKHLGKAGRLDDAINMFDEMNKLGCAPDVYAYNALMSGLARTGMLD 528

Query: 623 DAYHLLQGMLNLGLKPSLQTYTLLLS 648
           +A   ++ M   G  P + +Y ++L+
Sbjct: 529 EALSTMRRMQEHGCIPDINSYNIILN 554



 Score =  130 bits (327), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 83/283 (29%), Positives = 149/283 (52%), Gaps = 6/283 (2%)

Query: 336 QLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNV 395
           +L D   AL  F  +R Q   + D  TYT ++  LG+A +         +M R+GC+P+ 
Sbjct: 277 KLNDVHGALSLFEEMRHQYC-RPDVFTYTELIRGLGKAGRIDEAYHFFYEMQREGCRPDT 335

Query: 396 VTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLID--IHAKAGFLDVAMDMY 453
           +  N +I+  G+A  L++A+ +F++M  + C P  VTY T+I     +K+   +V    +
Sbjct: 336 IVMNNMINFLGKAGRLDDAMKLFQEMGTLRCIPSVVTYNTIIKALFESKSRASEVP-SWF 394

Query: 454 KKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKA 513
           ++M+ +G+SP +FTYS++I+   K   ++ A  L  EM  +G  P    Y  +I    KA
Sbjct: 395 ERMKESGISPSSFTYSILIDGFCKTNRMEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKA 454

Query: 514 RNYQSALKLYRDM-QNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPV 572
           + Y  A +L++++ +N G    +V Y+++++ LG  G LD+A  +F EM +    PD   
Sbjct: 455 KRYDLACELFQELKENCGSSSSRV-YAVMIKHLGKAGRLDDAINMFDEMNKLGCAPDVYA 513

Query: 573 YGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAF 615
           Y  L+    + G + +A      M + G  P++ + N +L+  
Sbjct: 514 YNALMSGLARTGMLDEALSTMRRMQEHGCIPDINSYNIILNGL 556



 Score =  122 bits (307), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 83/330 (25%), Positives = 149/330 (45%), Gaps = 47/330 (14%)

Query: 361 HTYTTMVGILGRARQFGAINKLLDQMVRDG-CQPNVVTYNRLIHSYGRANYLNEALDVFK 419
             Y +M+ +L    Q+  +++L ++M  +G C P+ +TY+ LI ++ +    + A+ +  
Sbjct: 195 QAYNSMIIMLMHEGQYEKVHELYNEMSTEGHCFPDTMTYSALISAFCKLGRRDSAIQLLN 254

Query: 420 QMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAG 479
           +M+  G +P    Y  L+ +  K   +  A+ ++++M+     PD FTY+ +I  LGKAG
Sbjct: 255 EMKDNGMQPTTKIYTMLVALFFKLNDVHGALSLFEEMRHQYCRPDVFTYTELIRGLGKAG 314

Query: 480 HLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRD-------------- 525
            +  A+  F EM  +GC P+ +  N MI    KA     A+KL+++              
Sbjct: 315 RIDEAYHFFYEMQREGCRPDTIVMNNMINFLGKAGRLDDAMKLFQEMGTLRCIPSVVTYN 374

Query: 526 ----------------------MQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRR 563
                                 M+ +G  P   TYSI+++       +++A  +  EM  
Sbjct: 375 TIIKALFESKSRASEVPSWFERMKESGISPSSFTYSILIDGFCKTNRMEKAMMLLEEMDE 434

Query: 564 KNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFL-----RV 618
           K + P    Y  L+D  GKA     A E ++      L+ N  + +S + A +     + 
Sbjct: 435 KGFPPCPAAYCSLIDALGKAKRYDLACELFQE-----LKENCGSSSSRVYAVMIKHLGKA 489

Query: 619 GQLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
           G+L DA ++   M  LG  P +  Y  L+S
Sbjct: 490 GRLDDAINMFDEMNKLGCAPDVYAYNALMS 519


>gi|356561677|ref|XP_003549106.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g62910-like [Glycine max]
          Length = 511

 Score =  150 bits (378), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 92/306 (30%), Positives = 159/306 (51%), Gaps = 1/306 (0%)

Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLI 402
           AL F + L  Q GF+ D+ +Y T++  L +  +  A+ +LL ++     +P+VV YN +I
Sbjct: 146 ALYFHDQLVAQ-GFQLDQVSYGTLINGLCKTGETKAVARLLRKLEGHSVKPDVVMYNTII 204

Query: 403 HSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLS 462
           +S  +   L +A DV+ +M V G  PD VTY TLI      G L  A  +  +M+   ++
Sbjct: 205 NSLCKNKLLGDACDVYSEMIVKGISPDVVTYTTLIHGFCIMGHLKEAFSLLNEMKLKNIN 264

Query: 463 PDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKL 522
           P+  T++++I+ L K G ++ A  L   M+     P++ TYN +I         + A  +
Sbjct: 265 PNVCTFNILIDALSKEGKMKEAKILLAVMMKACIKPDVFTYNSLIDGYFLVDEVKHAKYV 324

Query: 523 YRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGK 582
           +  M   G  PD   Y+ ++  L     +DEA ++F EM+ KN +PD   Y  L+D   K
Sbjct: 325 FYSMAQRGVTPDVQCYTNMINGLCKTKMVDEAMSLFEEMKHKNMIPDIVTYNSLIDGLCK 384

Query: 583 AGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQT 642
             ++ +A    + M + G++P+V +   LL    + G+L DA  + Q +L  G   ++  
Sbjct: 385 NHHLERAIALCKRMKEQGIQPDVYSYTILLDGLCKSGRLEDAKEIFQRLLAKGYHLNVHA 444

Query: 643 YTLLLS 648
           YT+L++
Sbjct: 445 YTVLIN 450



 Score =  129 bits (323), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 82/301 (27%), Positives = 143/301 (47%), Gaps = 2/301 (0%)

Query: 349 WLRRQAG--FKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYG 406
            LR+  G   K D   Y T++  L + +  G    +  +M+  G  P+VVTY  LIH + 
Sbjct: 184 LLRKLEGHSVKPDVVMYNTIINSLCKNKLLGDACDVYSEMIVKGISPDVVTYTTLIHGFC 243

Query: 407 RANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTF 466
              +L EA  +  +M++    P+  T+  LID  +K G +  A  +   M  A + PD F
Sbjct: 244 IMGHLKEAFSLLNEMKLKNINPNVCTFNILIDALSKEGKMKEAKILLAVMMKACIKPDVF 303

Query: 467 TYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDM 526
           TY+ +I+       ++ A  +F  M  +G  P++  Y  MI    K +    A+ L+ +M
Sbjct: 304 TYNSLIDGYFLVDEVKHAKYVFYSMAQRGVTPDVQCYTNMINGLCKTKMVDEAMSLFEEM 363

Query: 527 QNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNV 586
           ++    PD VTY+ +++ L    +L+ A A+   M+ +   PD   Y +L+D   K+G +
Sbjct: 364 KHKNMIPDIVTYNSLIDGLCKNHHLERAIALCKRMKEQGIQPDVYSYTILLDGLCKSGRL 423

Query: 587 RKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLL 646
             A E ++ +L  G   NV     L++   + G   +A  L   M + G  P   T+ ++
Sbjct: 424 EDAKEIFQRLLAKGYHLNVHAYTVLINRLCKAGFFDEALDLKSKMEDKGCMPDAVTFDII 483

Query: 647 L 647
           +
Sbjct: 484 I 484



 Score =  124 bits (311), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 75/282 (26%), Positives = 136/282 (48%)

Query: 363 YTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQ 422
           +  ++  L   + +  +  L  Q   +G  P++ T + LI+ +    ++  A  VF  + 
Sbjct: 60  FNNILSSLVNNKHYPTVISLFKQFEPNGITPDLCTLSILINCFCHQAHITLAFSVFANIL 119

Query: 423 VVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQ 482
             G  P+ +T  TLI      G +  A+  + ++ A G   D  +Y  +IN L K G  +
Sbjct: 120 KRGFHPNAITLNTLIKGLCFRGEIKKALYFHDQLVAQGFQLDQVSYGTLINGLCKTGETK 179

Query: 483 AAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVM 542
           A  +L  ++      P++V YN +I    K +    A  +Y +M   G  PD VTY+ ++
Sbjct: 180 AVARLLRKLEGHSVKPDVVMYNTIINSLCKNKLLGDACDVYSEMIVKGISPDVVTYTTLI 239

Query: 543 EVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLR 602
                 G+L EA ++  EM+ KN  P+   + +L+D   K G +++A      M++A ++
Sbjct: 240 HGFCIMGHLKEAFSLLNEMKLKNINPNVCTFNILIDALSKEGKMKEAKILLAVMMKACIK 299

Query: 603 PNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYT 644
           P+V T NSL+  +  V ++  A ++   M   G+ P +Q YT
Sbjct: 300 PDVFTYNSLIDGYFLVDEVKHAKYVFYSMAQRGVTPDVQCYT 341



 Score = 97.4 bits (241), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 86/356 (24%), Positives = 149/356 (41%), Gaps = 39/356 (10%)

Query: 393 PNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDM 452
           P    +N ++ S     +    + +FKQ +  G  PD  T   LI+       + +A  +
Sbjct: 55  PPTFHFNNILSSLVNNKHYPTVISLFKQFEPNGITPDLCTLSILINCFCHQAHITLAFSV 114

Query: 453 YKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAK 512
           +  +   G  P+  T + +I  L   G ++ A     ++V QG   + V+Y  +I    K
Sbjct: 115 FANILKRGFHPNAITLNTLIKGLCFRGEIKKALYFHDQLVAQGFQLDQVSYGTLINGLCK 174

Query: 513 ARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPV 572
               ++  +L R ++    +PD V Y+ ++  L     L +A  V++EM  K   PD   
Sbjct: 175 TGETKAVARLLRKLEGHSVKPDVVMYNTIINSLCKNKLLGDACDVYSEMIVKGISPDVVT 234

Query: 573 YGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGML 632
           Y  L+  +   G++++A+     M    + PNV T N L+ A  + G++ +A  LL  M+
Sbjct: 235 YTTLIHGFCIMGHLKEAFSLLNEMKLKNINPNVCTFNILIDALSKEGKMKEAKILLAVMM 294

Query: 633 NLGLKPSLQTYTLLLSCCTEARSPYDMGFCHELMAVSGHPAHMFLLSMPSPG--PDGQNV 690
              +KP + TY  L+          D  F   L+    H  ++F  SM   G  PD Q  
Sbjct: 295 KACIKPDVFTYNSLI----------DGYF---LVDEVKHAKYVF-YSMAQRGVTPDVQCY 340

Query: 691 RDHVGSFLEMMHSEDRESKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAV 746
            + +                         L K+ + +EA S++E    KN+ PD V
Sbjct: 341 TNMING-----------------------LCKTKMVDEAMSLFEEMKHKNMIPDIV 373



 Score = 95.5 bits (236), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 59/180 (32%), Positives = 97/180 (53%), Gaps = 2/180 (1%)

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
           Q G   D   YT M+  L + +       L ++M      P++VTYN LI    + ++L 
Sbjct: 330 QRGVTPDVQCYTNMINGLCKTKMVDEAMSLFEEMKHKNMIPDIVTYNSLIDGLCKNHHLE 389

Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
            A+ + K+M+  G +PD  +Y  L+D   K+G L+ A ++++++ A G   +   Y+V+I
Sbjct: 390 RAIALCKRMKEQGIQPDVYSYTILLDGLCKSGRLEDAKEIFQRLLAKGYHLNVHAYTVLI 449

Query: 473 NCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMI-ALQAKARNYQSALKLYRDMQNAGF 531
           N L KAG    A  L  +M ++GC+P+ VT++I+I AL  K  N   A K+ R+M   G 
Sbjct: 450 NRLCKAGFFDEALDLKSKMEDKGCMPDAVTFDIIIRALFEKDEN-DKAEKILREMIARGL 508



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 30/110 (27%), Positives = 58/110 (52%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           ++ G + D ++YT ++  L ++ +     ++  +++  G   NV  Y  LI+   +A + 
Sbjct: 399 KEQGIQPDVYSYTILLDGLCKSGRLEDAKEIFQRLLAKGYHLNVHAYTVLINRLCKAGFF 458

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGL 461
           +EALD+  +M+  GC PD VT+  +I    +    D A  + ++M A GL
Sbjct: 459 DEALDLKSKMEDKGCMPDAVTFDIIIRALFEKDENDKAEKILREMIARGL 508


>gi|242071495|ref|XP_002451024.1| hypothetical protein SORBIDRAFT_05g022840 [Sorghum bicolor]
 gi|241936867|gb|EES10012.1| hypothetical protein SORBIDRAFT_05g022840 [Sorghum bicolor]
          Length = 813

 Score =  150 bits (378), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 93/309 (30%), Positives = 150/309 (48%), Gaps = 1/309 (0%)

Query: 339 DHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTY 398
           D   A   FN +  Q G   D  TY  +V  L +AR       +L QMV  G  P+  TY
Sbjct: 231 DVNKACDLFNEMV-QRGISPDLSTYNCVVNALCKARAMDKAEAILRQMVDKGVLPDNWTY 289

Query: 399 NRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQA 458
           N LI+ Y       EA+ V K+M   G  PD VT  +L+    K G +  A D++  M  
Sbjct: 290 NSLIYGYSSTGQWKEAVRVSKKMTSQGILPDVVTLNSLMASLCKHGKIKDARDVFDSMAM 349

Query: 459 AGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQS 518
            G   D F+Y +++N     G L    +LF  M++ G  P+   +N++I   AK      
Sbjct: 350 KGQKTDIFSYKIMLNGYATKGCLVDLTELFNLMLSDGIAPDSHIFNVLIKAYAKCGMLDR 409

Query: 519 ALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVD 578
           A  ++ +M+  G EPD VTYS V+  L   G +D+A   F +M  +   P    Y  L+ 
Sbjct: 410 ATIIFNEMREQGVEPDVVTYSTVIAALCRIGKMDDAVEKFNQMIDQGVAPSISTYHFLIQ 469

Query: 579 LWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKP 638
            +   G++ KA +    M+  G+RP++   N +++   ++G++ DA ++    +++GL P
Sbjct: 470 GFCTHGDLLKAKDLVLQMMNKGMRPDIGCFNFIINNLCKLGRVMDAQNIFDFTISIGLHP 529

Query: 639 SLQTYTLLL 647
           ++  Y  L+
Sbjct: 530 NVMVYNTLM 538



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 116/466 (24%), Positives = 212/466 (45%), Gaps = 55/466 (11%)

Query: 359 DEHTYTTMVGILGRARQFGAINKLLDQMVRDG--CQPNVVTYNRLIHSYGRANYLNEALD 416
           D  +Y  ++  L   R+ G  ++LL  M   G  C PN V YN +I  + +   +N+A D
Sbjct: 178 DVFSYCIVLKSLCSDRKSGQADELLRMMAEGGAVCLPNAVAYNTVIDGFFKEGDVNKACD 237

Query: 417 VFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLG 476
           +F +M   G  PD  TY  +++   KA  +D A  + ++M   G+ PD +TY+ +I    
Sbjct: 238 LFNEMVQRGISPDLSTYNCVVNALCKARAMDKAEAILRQMVDKGVLPDNWTYNSLIYGYS 297

Query: 477 KAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKV 536
             G  + A ++  +M +QG +P++VT N ++A   K    + A  ++  M   G + D  
Sbjct: 298 STGQWKEAVRVSKKMTSQGILPDVVTLNSLMASLCKHGKIKDARDVFDSMAMKGQKTDIF 357

Query: 537 TYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAM 596
           +Y I++      G L +   +F  M      PD  ++ +L+  + K G + +A   +  M
Sbjct: 358 SYKIMLNGYATKGCLVDLTELFNLMLSDGIAPDSHIFNVLIKAYAKCGMLDRATIIFNEM 417

Query: 597 LQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSP 656
            + G+ P+V T +++++A  R+G++ DA      M++ G+ PS+ TY  L+         
Sbjct: 418 REQGVEPDVVTYSTVIAALCRIGKMDDAVEKFNQMIDQGVAPSISTYHFLIQ-------- 469

Query: 657 YDMGFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRESKRGLVDAV 716
              GFC           H  LL            +D V   L+MM+   R    G  + +
Sbjct: 470 ---GFC----------THGDLL----------KAKDLV---LQMMNKGMRPDI-GCFNFI 502

Query: 717 VDFLHKSGLKEEAGSVWEVAAQKNVYPDAVKEKGMSYWLINLHVMSDGTAVIALSRTLAW 776
           ++ L K G   +A ++++      ++P+      M Y     + + DG  ++        
Sbjct: 503 INNLCKLGRVMDAQNIFDFTISIGLHPNV-----MVY-----NTLMDGYCLVGKMENALR 552

Query: 777 FRKQMLISGVGPSRI---DIVTGWGRRSRV-TGTSLVRQAVQELLH 818
               M+ +G+ P+ +    +V G+ +  R+  G SL R    E+LH
Sbjct: 553 VFDVMVSAGIQPNVVVYGTLVNGYCKVGRIDEGLSLFR----EILH 594



 Score =  128 bits (321), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 111/448 (24%), Positives = 192/448 (42%), Gaps = 40/448 (8%)

Query: 307 QWKWGPLAEEALGNTNYSMDAYQANQVLKQLQDH---TVALGFFNWLRRQAGFKHDEHTY 363
           QWK      + + +     D    N ++  L  H     A   F+ +  + G K D  +Y
Sbjct: 301 QWKEAVRVSKKMTSQGILPDVVTLNSLMASLCKHGKIKDARDVFDSMAMK-GQKTDIFSY 359

Query: 364 TTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQV 423
             M+           + +L + M+ DG  P+   +N LI +Y +   L+ A  +F +M+ 
Sbjct: 360 KIMLNGYATKGCLVDLTELFNLMLSDGIAPDSHIFNVLIKAYAKCGMLDRATIIFNEMRE 419

Query: 424 VGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQA 483
            G EPD VTY T+I    + G +D A++ + +M   G++P   TY  +I      G L  
Sbjct: 420 QGVEPDVVTYSTVIAALCRIGKMDDAVEKFNQMIDQGVAPSISTYHFLIQGFCTHGDLLK 479

Query: 484 AHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVME 543
           A  L  +M+N+G  P++  +N +I    K      A  ++    + G  P+ + Y+ +M+
Sbjct: 480 AKDLVLQMMNKGMRPDIGCFNFIINNLCKLGRVMDAQNIFDFTISIGLHPNVMVYNTLMD 539

Query: 544 VLGHC--GYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGL 601
             G+C  G ++ A  VF  M      P+  VYG LV+ + K G + +    +  +L  G+
Sbjct: 540 --GYCLVGKMENALRVFDVMVSAGIQPNVVVYGTLVNGYCKVGRIDEGLSLFREILHKGI 597

Query: 602 RPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL------SCCTEA-- 653
           +P+    N +L    + G+   A      M   G+     TY+++L      SC  EA  
Sbjct: 598 KPSTTLYNIILHGLFQAGRTVPAKVKFHEMTESGIAMDRYTYSIVLGGLFKNSCSDEAIL 657

Query: 654 --RSPYDMGFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRESKRG 711
             +  + M    ++  ++   A MF +         +  +D   S           S+ G
Sbjct: 658 LFKELHAMNVKIDITTLNIMIAGMFQIRRV------EEAKDLFASI----------SRSG 701

Query: 712 LVDAVVDF------LHKSGLKEEAGSVW 733
           LV +VV +      L K GL EEA  ++
Sbjct: 702 LVPSVVTYSIMMTNLIKEGLVEEADDMF 729



 Score =  105 bits (263), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 79/326 (24%), Positives = 147/326 (45%), Gaps = 38/326 (11%)

Query: 346 FFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSY 405
            FN +R Q G + D  TY+T++  L R  +     +  +QM+  G  P++ TY+ LI  +
Sbjct: 413 IFNEMREQ-GVEPDVVTYSTVIAALCRIGKMDDAVEKFNQMIDQGVAPSISTYHFLIQGF 471

Query: 406 GRANYLNEALDVFKQMQ-----------------------------------VVGCEPDR 430
                L +A D+  QM                                     +G  P+ 
Sbjct: 472 CTHGDLLKAKDLVLQMMNKGMRPDIGCFNFIINNLCKLGRVMDAQNIFDFTISIGLHPNV 531

Query: 431 VTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCE 490
           + Y TL+D +   G ++ A+ ++  M +AG+ P+   Y  ++N   K G +     LF E
Sbjct: 532 MVYNTLMDGYCLVGKMENALRVFDVMVSAGIQPNVVVYGTLVNGYCKVGRIDEGLSLFRE 591

Query: 491 MVNQGCIPNLVTYNIMI-ALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCG 549
           ++++G  P+   YNI++  L    R   + +K + +M  +G   D+ TYSIV+  L    
Sbjct: 592 ILHKGIKPSTTLYNIILHGLFQAGRTVPAKVK-FHEMTESGIAMDRYTYSIVLGGLFKNS 650

Query: 550 YLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCN 609
             DEA  +F E+   N   D     +++    +   V +A + + ++ ++GL P+V T +
Sbjct: 651 CSDEAILLFKELHAMNVKIDITTLNIMIAGMFQIRRVEEAKDLFASISRSGLVPSVVTYS 710

Query: 610 SLLSAFLRVGQLSDAYHLLQGMLNLG 635
            +++  ++ G + +A  +   M N G
Sbjct: 711 IMMTNLIKEGLVEEADDMFSSMENAG 736



 Score =  105 bits (261), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 73/294 (24%), Positives = 135/294 (45%), Gaps = 1/294 (0%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           G + D   +  ++  L +  +      + D  +  G  PNV+ YN L+  Y     +  A
Sbjct: 491 GMRPDIGCFNFIINNLCKLGRVMDAQNIFDFTISIGLHPNVMVYNTLMDGYCLVGKMENA 550

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
           L VF  M   G +P+ V Y TL++ + K G +D  + +++++   G+ P T  Y++I++ 
Sbjct: 551 LRVFDVMVSAGIQPNVVVYGTLVNGYCKVGRIDEGLSLFREILHKGIKPSTTLYNIILHG 610

Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPD 534
           L +AG    A   F EM   G   +  TY+I++    K      A+ L++++     + D
Sbjct: 611 LFQAGRTVPAKVKFHEMTESGIAMDRYTYSIVLGGLFKNSCSDEAILLFKELHAMNVKID 670

Query: 535 KVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYE 594
             T +I++  +     ++EA+ +FA + R   VP    Y +++    K G V +A + + 
Sbjct: 671 ITTLNIMIAGMFQIRRVEEAKDLFASISRSGLVPSVVTYSIMMTNLIKEGLVEEADDMFS 730

Query: 595 AMLQAGL-RPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
           +M  AG  +PN    N ++   L   ++  A   L  +          T TLL+
Sbjct: 731 SMENAGCEQPNSQLLNHVVRELLEKREIVRAGTYLSKIDERSFSLDHSTTTLLI 784



 Score = 85.9 bits (211), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 87/371 (23%), Positives = 154/371 (41%), Gaps = 25/371 (6%)

Query: 428 PDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHL-QAAHQ 486
           P   TY  L+D   +A    + +  + ++   GL  DT   S ++  L +A    +A   
Sbjct: 106 PTLHTYGILMDCCTRAHRPKLTLAFFGQVLKTGLGIDTIMISNLLRGLCEAKRTAEALDI 165

Query: 487 LFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAG--FEPDKVTYSIVMEV 544
           L   M + GC+P++ +Y I++      R    A +L R M   G    P+ V Y+ V++ 
Sbjct: 166 LLHRMPHLGCVPDVFSYCIVLKSLCSDRKSGQADELLRMMAEGGAVCLPNAVAYNTVIDG 225

Query: 545 LGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPN 604
               G +++A  +F EM ++   PD   Y  +V+   KA  + KA      M+  G+ P+
Sbjct: 226 FFKEGDVNKACDLFNEMVQRGISPDLSTYNCVVNALCKARAMDKAEAILRQMVDKGVLPD 285

Query: 605 VPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTY-TLLLSCC-----TEARSPYD 658
             T NSL+  +   GQ  +A  + + M + G+ P + T  +L+ S C      +AR  +D
Sbjct: 286 NWTYNSLIYGYSSTGQWKEAVRVSKKMTSQGILPDVVTLNSLMASLCKHGKIKDARDVFD 345

Query: 659 MGFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRESKRGLVDAVVD 718
                  MA+ G    +F   +   G   +     +     +M S+       + + ++ 
Sbjct: 346 S------MAMKGQKTDIFSYKIMLNGYATKGCLVDLTELFNLMLSDGIAPDSHIFNVLIK 399

Query: 719 FLHKSGLKEEAGSVWEVAAQKNVYPDAVKEKGMSYWLINLHVMSDGTAVIALSRTLAWFR 778
              K G+ + A  ++    ++ V PD V    +   L  +  M D               
Sbjct: 400 AYAKCGMLDRATIIFNEMREQGVEPDVVTYSTVIAALCRIGKMDDAVEKF---------- 449

Query: 779 KQMLISGVGPS 789
            QM+  GV PS
Sbjct: 450 NQMIDQGVAPS 460


>gi|356558071|ref|XP_003547332.1| PREDICTED: pentatricopeptide repeat-containing protein At1g51965,
           mitochondrial-like [Glycine max]
          Length = 647

 Score =  150 bits (378), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 73/201 (36%), Positives = 119/201 (59%), Gaps = 1/201 (0%)

Query: 341 TVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNR 400
           T A+   N +  + G   D   Y T+   LGR +Q   I+ L ++M +DG  P++ TYN 
Sbjct: 420 TEAIDLLNKIH-EKGITTDTIMYNTVFTALGRLKQISHIHDLYEKMKQDGPPPDIFTYNI 478

Query: 401 LIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAG 460
           LI S+GRA  ++ A+  F++++   C+PD ++Y +LI+   K G +D A   +K+MQ  G
Sbjct: 479 LISSFGRAGRVDIAVKFFEELENSDCKPDVISYNSLINCLGKNGDVDEAHMRFKEMQEKG 538

Query: 461 LSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSAL 520
           L+PD  TYS +I C GK   ++ A +LF EM+ + C PNL+TYNI++    ++     A+
Sbjct: 539 LNPDVVTYSTLIECFGKTDKVEMACRLFDEMLAEECTPNLITYNILLDCLERSGRTAEAV 598

Query: 521 KLYRDMQNAGFEPDKVTYSIV 541
            LY  ++  G  PD +TY+++
Sbjct: 599 DLYAKLKQQGLTPDSITYAVL 619



 Score =  145 bits (366), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 100/383 (26%), Positives = 163/383 (42%), Gaps = 70/383 (18%)

Query: 334 LKQLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQP 393
           L+ L   T    + + +R   G++ D   Y  ++  L +  +  +  K+ + M R  C+P
Sbjct: 208 LRALDSSTAFRVYLDMIRH--GYRLDIFGYNMLLDALAKDEKVCSY-KVFEDMKRRHCEP 264

Query: 394 NVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMY 453
           +V TY  +I   G+++  +EAL +F+ M   GC P+ + Y T+I+  AK   +D A+ ++
Sbjct: 265 DVFTYTIMIRMTGKSSKTDEALALFQAMLAKGCTPNLIGYNTMIEALAKGRMVDKAVLLF 324

Query: 454 KKMQAAGLSPDTFTYSVIIN--------------------------------CLGKAGHL 481
            KM    + P+ FTYSVI+N                                 L K GH 
Sbjct: 325 SKMVENDIQPNEFTYSVILNLLVAEGKLNKLDNIVDISKKYINKQIYAYFVRTLSKVGHA 384

Query: 482 QAAHQLFCEMVN-----------------------------------QGCIPNLVTYNIM 506
             AH+LFC M N                                   +G   + + YN +
Sbjct: 385 SEAHRLFCNMWNFHDKGDKDACMSMLESLCSAGKMTEAIDLLNKIHEKGITTDTIMYNTV 444

Query: 507 IALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNW 566
                + +       LY  M+  G  PD  TY+I++   G  G +D A   F E+   + 
Sbjct: 445 FTALGRLKQISHIHDLYEKMKQDGPPPDIFTYNILISSFGRAGRVDIAVKFFEELENSDC 504

Query: 567 VPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYH 626
            PD   Y  L++  GK G+V +A   ++ M + GL P+V T ++L+  F +  ++  A  
Sbjct: 505 KPDVISYNSLINCLGKNGDVDEAHMRFKEMQEKGLNPDVVTYSTLIECFGKTDKVEMACR 564

Query: 627 LLQGMLNLGLKPSLQTYTLLLSC 649
           L   ML     P+L TY +LL C
Sbjct: 565 LFDEMLAEECTPNLITYNILLDC 587



 Score =  139 bits (350), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 90/317 (28%), Positives = 149/317 (47%), Gaps = 34/317 (10%)

Query: 363 YTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYN---RLIHSYGRANYLNEALDVFK 419
           Y TM+  L + R       L  +MV +  QPN  TY+    L+ + G+ N L+  +D+ K
Sbjct: 304 YNTMIEALAKGRMVDKAVLLFSKMVENDIQPNEFTYSVILNLLVAEGKLNKLDNIVDISK 363

Query: 420 Q-------------MQVVG--CEPDRVTYCTLIDIHAK---------------AGFLDVA 449
           +             +  VG   E  R+ +C + + H K               AG +  A
Sbjct: 364 KYINKQIYAYFVRTLSKVGHASEAHRL-FCNMWNFHDKGDKDACMSMLESLCSAGKMTEA 422

Query: 450 MDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIAL 509
           +D+  K+   G++ DT  Y+ +   LG+   +   H L+ +M   G  P++ TYNI+I+ 
Sbjct: 423 IDLLNKIHEKGITTDTIMYNTVFTALGRLKQISHIHDLYEKMKQDGPPPDIFTYNILISS 482

Query: 510 QAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPD 569
             +A     A+K + +++N+  +PD ++Y+ ++  LG  G +DEA   F EM+ K   PD
Sbjct: 483 FGRAGRVDIAVKFFEELENSDCKPDVISYNSLINCLGKNGDVDEAHMRFKEMQEKGLNPD 542

Query: 570 EPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQ 629
              Y  L++ +GK   V  A   ++ ML     PN+ T N LL    R G+ ++A  L  
Sbjct: 543 VVTYSTLIECFGKTDKVEMACRLFDEMLAEECTPNLITYNILLDCLERSGRTAEAVDLYA 602

Query: 630 GMLNLGLKPSLQTYTLL 646
            +   GL P   TY +L
Sbjct: 603 KLKQQGLTPDSITYAVL 619



 Score =  122 bits (305), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 67/232 (28%), Positives = 123/232 (53%), Gaps = 1/232 (0%)

Query: 357 KHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALD 416
           K D+    +M+  L  A +      LL+++   G   + + YN +  + GR   ++   D
Sbjct: 400 KGDKDACMSMLESLCSAGKMTEAIDLLNKIHEKGITTDTIMYNTVFTALGRLKQISHIHD 459

Query: 417 VFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLG 476
           ++++M+  G  PD  TY  LI    +AG +D+A+  +++++ +   PD  +Y+ +INCLG
Sbjct: 460 LYEKMKQDGPPPDIFTYNILISSFGRAGRVDIAVKFFEELENSDCKPDVISYNSLINCLG 519

Query: 477 KAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKV 536
           K G +  AH  F EM  +G  P++VTY+ +I    K    + A +L+ +M      P+ +
Sbjct: 520 KNGDVDEAHMRFKEMQEKGLNPDVVTYSTLIECFGKTDKVEMACRLFDEMLAEECTPNLI 579

Query: 537 TYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLW-GKAGNVR 587
           TY+I+++ L   G   EA  ++A+++++   PD   Y +L  L  G  G +R
Sbjct: 580 TYNILLDCLERSGRTAEAVDLYAKLKQQGLTPDSITYAVLERLQSGGHGKLR 631



 Score =  119 bits (298), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 109/456 (23%), Positives = 198/456 (43%), Gaps = 44/456 (9%)

Query: 329 QANQVLKQLQDHTVALGFFNWL-RRQAGFKHDEHTYTTMVGILGRAR---QFGAINKLLD 384
           +A+++LK L+  ++AL FF +       F+H+  TY  +  IL ++    +F     LL 
Sbjct: 95  EASEILKALKHPSLALRFFQFCPSLNPSFRHESFTYNRLFLILSKSTNPARFDQARSLLH 154

Query: 385 QMVR-----------------------DGC---------QPNVVTYNRLIHSYGRANYLN 412
            M R                       + C         + N  TY  L+ +Y RA   +
Sbjct: 155 DMDRRAVRGSISTVNILVGFFGAGEDLERCVSLVKKWDLRLNAYTYKCLLQAYLRALDSS 214

Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
            A  V+  M   G   D   Y  L+D  AK   +  +  +++ M+     PD FTY+++I
Sbjct: 215 TAFRVYLDMIRHGYRLDIFGYNMLLDALAKDEKV-CSYKVFEDMKRRHCEPDVFTYTIMI 273

Query: 473 NCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFE 532
              GK+     A  LF  M+ +GC PNL+ YN MI   AK R    A+ L+  M     +
Sbjct: 274 RMTGKSSKTDEALALFQAMLAKGCTPNLIGYNTMIEALAKGRMVDKAVLLFSKMVENDIQ 333

Query: 533 PDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEW 592
           P++ TYS+++ +L   G L++ + +  ++ +K    ++ +Y   V    K G+  +A   
Sbjct: 334 PNEFTYSVILNLLVAEGKLNKLDNI-VDISKKYI--NKQIYAYFVRTLSKVGHASEAHRL 390

Query: 593 YEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTE 652
           +  M     + +   C S+L +    G++++A  LL  +   G+      Y  + +    
Sbjct: 391 FCNMWNFHDKGDKDACMSMLESLCSAGKMTEAIDLLNKIHEKGITTDTIMYNTVFTALGR 450

Query: 653 ARSPYDMGFCHELMAVSGHPAHMFL--LSMPSPGPDGQNVRDHVGSFLEMMHSEDRESKR 710
            +    +   +E M   G P  +F   + + S G  G+   D    F E + + D +   
Sbjct: 451 LKQISHIHDLYEKMKQDGPPPDIFTYNILISSFGRAGR--VDIAVKFFEELENSDCKPDV 508

Query: 711 GLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAV 746
              +++++ L K+G  +EA   ++   +K + PD V
Sbjct: 509 ISYNSLINCLGKNGDVDEAHMRFKEMQEKGLNPDVV 544



 Score =  105 bits (262), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 51/160 (31%), Positives = 91/160 (56%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           +Q G   D  TY  ++   GRA +     K  +++    C+P+V++YN LI+  G+   +
Sbjct: 465 KQDGPPPDIFTYNILISSFGRAGRVDIAVKFFEELENSDCKPDVISYNSLINCLGKNGDV 524

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
           +EA   FK+MQ  G  PD VTY TLI+   K   +++A  ++ +M A   +P+  TY+++
Sbjct: 525 DEAHMRFKEMQEKGLNPDVVTYSTLIECFGKTDKVEMACRLFDEMLAEECTPNLITYNIL 584

Query: 472 INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQA 511
           ++CL ++G    A  L+ ++  QG  P+ +TY ++  LQ+
Sbjct: 585 LDCLERSGRTAEAVDLYAKLKQQGLTPDSITYAVLERLQS 624


>gi|115472343|ref|NP_001059770.1| Os07g0513200 [Oryza sativa Japonica Group]
 gi|27818007|dbj|BAC55770.1| putative CRP1 protein [Oryza sativa Japonica Group]
 gi|50509504|dbj|BAD31185.1| putative CRP1 protein [Oryza sativa Japonica Group]
 gi|113611306|dbj|BAF21684.1| Os07g0513200 [Oryza sativa Japonica Group]
 gi|215715304|dbj|BAG95055.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 754

 Score =  150 bits (378), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 96/316 (30%), Positives = 154/316 (48%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           G   D   +TT++    R     A     D+M + G   + VTY  LI+   RA  L EA
Sbjct: 350 GVVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEA 409

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
             V ++M+  G + D VTY  LID + K G +  A  ++ KM    ++P+  TY+ + + 
Sbjct: 410 ERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDG 469

Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPD 534
           L K G + AA++L  EM ++G   N+ TYN +I    KA N + A++   DM  AG +PD
Sbjct: 470 LCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPD 529

Query: 535 KVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYE 594
             TY+ ++  L     LD A ++  EM  K   P    Y +L++ +  +G V       E
Sbjct: 530 VYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLE 589

Query: 595 AMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEAR 654
            ML+  + PN  T NSL+  +     +     + +GML+  + P+  TY +L+    +AR
Sbjct: 590 WMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQEVVPNENTYNILIKGHCKAR 649

Query: 655 SPYDMGFCHELMAVSG 670
           +  +  + H  M   G
Sbjct: 650 NMKEALYFHSEMIEKG 665



 Score =  129 bits (325), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 84/309 (27%), Positives = 147/309 (47%), Gaps = 1/309 (0%)

Query: 339 DHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTY 398
           D   A  +F+ ++++ G   D  TYT ++  L RA +     ++L +M   G   + VTY
Sbjct: 370 DLAAARNWFDEMQKR-GLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTY 428

Query: 399 NRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQA 458
             LI  Y +   + EA  V  +M      P+ VTY  L D   K G +  A ++  +M +
Sbjct: 429 TVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCS 488

Query: 459 AGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQS 518
            GL  + FTY+ +IN L KAG+L+ A +   +M   G  P++ TY  +I    +++    
Sbjct: 489 KGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDR 548

Query: 519 ALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVD 578
           A  L ++M + G +P  VTY+++M      G ++  + +   M  KN  P+   Y  L+ 
Sbjct: 549 AHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMK 608

Query: 579 LWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKP 638
            +    N++   E Y+ ML   + PN  T N L+    +   + +A +    M+  G + 
Sbjct: 609 QYCIEKNMKSTTEIYKGMLSQEVVPNENTYNILIKGHCKARNMKEALYFHSEMIEKGFRL 668

Query: 639 SLQTYTLLL 647
           +  +Y  L+
Sbjct: 669 TASSYNALI 677



 Score =  124 bits (310), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 88/304 (28%), Positives = 146/304 (48%), Gaps = 11/304 (3%)

Query: 359 DEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVF 418
           D  TY  MV       +     KLL +M   G + N V Y  +I        +++A+ V 
Sbjct: 284 DVVTYGIMVHGYCTLSELETAIKLLSEMAARGLELNPVAYTSVIALLCDEGQVSDAVRVV 343

Query: 419 KQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKA 478
           + M + G   D   + T++    + G L  A + + +MQ  GL+ D  TY+ +IN L +A
Sbjct: 344 EDMVMHGVVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRA 403

Query: 479 GHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTY 538
           G L+ A ++  EM ++G   + VTY ++I    K      A  ++  M      P+ VTY
Sbjct: 404 GELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTY 463

Query: 539 SIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQ 598
           + + + L   G +  A  +  EM  K    +   Y  L++   KAGN+ +A      M +
Sbjct: 464 TALSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDE 523

Query: 599 AGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYD 658
           AGL+P+V T  +++ A  +  +L  A+ LLQ ML+ G+KP++ TY +L++          
Sbjct: 524 AGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMN---------- 573

Query: 659 MGFC 662
            GFC
Sbjct: 574 -GFC 576



 Score =  123 bits (309), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 82/295 (27%), Positives = 145/295 (49%), Gaps = 7/295 (2%)

Query: 362 TYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQM 421
           +Y  ++  L  A +    ++L D+M      P+VVTY  ++H Y   + L  A+ +  +M
Sbjct: 255 SYNILLKALCTAGRIKDAHQLFDEM---ASPPDVVTYGIMVHGYCTLSELETAIKLLSEM 311

Query: 422 QVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHL 481
              G E + V Y ++I +    G +  A+ + + M   G+  D   ++ +++   + G L
Sbjct: 312 AARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDL 371

Query: 482 QAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIV 541
            AA   F EM  +G   + VTY  +I    +A   + A ++ ++M++ G + D VTY+++
Sbjct: 372 AAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVL 431

Query: 542 MEVLGHC--GYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQA 599
           ++  G+C  G + EA  V  +M +K   P+   Y  L D   K G+V  A E    M   
Sbjct: 432 ID--GYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSK 489

Query: 600 GLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEAR 654
           GL  N+ T NSL++   + G L  A   +  M   GLKP + TYT ++    +++
Sbjct: 490 GLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSK 544



 Score =  109 bits (273), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 71/248 (28%), Positives = 122/248 (49%), Gaps = 6/248 (2%)

Query: 362 TYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQM 421
           TYT +   L +     A N+LL +M   G + N+ TYN LI+   +A  L +A+     M
Sbjct: 462 TYTALSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDM 521

Query: 422 QVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHL 481
              G +PD  TY T+I    ++  LD A  + ++M   G+ P   TY+V++N    +G +
Sbjct: 522 DEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRV 581

Query: 482 QAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIV 541
           +   +L   M+ +   PN  TYN ++      +N +S  ++Y+ M +    P++ TY+I+
Sbjct: 582 EGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQEVVPNENTYNIL 641

Query: 542 MEVLGHCGYLDEAEAVF--AEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQA 599
           ++  GHC   +  EA++  +EM  K +      Y  L+ L  K     +A   +E M + 
Sbjct: 642 IK--GHCKARNMKEALYFHSEMIEKGFRLTASSYNALIRLLNKKKKFTEARRLFEKMRKE 699

Query: 600 GL--RPNV 605
            L   P+V
Sbjct: 700 RLTAEPDV 707



 Score = 96.3 bits (238), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 59/202 (29%), Positives = 108/202 (53%), Gaps = 7/202 (3%)

Query: 446 LDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNI 505
           LD A+ +++++       +T +Y++++  L  AG ++ AHQLF EM +    P++VTY I
Sbjct: 238 LDEAVQLFQELP----EKNTCSYNILLKALCTAGRIKDAHQLFDEMASP---PDVVTYGI 290

Query: 506 MIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKN 565
           M+         ++A+KL  +M   G E + V Y+ V+ +L   G + +A  V  +M    
Sbjct: 291 MVHGYCTLSELETAIKLLSEMAARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHG 350

Query: 566 WVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAY 625
            V D  V+  ++  + + G++  A  W++ M + GL  +  T  +L++   R G+L +A 
Sbjct: 351 VVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAE 410

Query: 626 HLLQGMLNLGLKPSLQTYTLLL 647
            +LQ M + GL     TYT+L+
Sbjct: 411 RVLQEMEDKGLDVDAVTYTVLI 432



 Score = 65.9 bits (159), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 50/205 (24%), Positives = 80/205 (39%), Gaps = 35/205 (17%)

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVT--------------- 397
           +AG K D +TYTT++G L ++++    + LL +M+  G +P +VT               
Sbjct: 523 EAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVE 582

Query: 398 --------------------YNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLI 437
                               YN L+  Y     +    +++K M      P+  TY  LI
Sbjct: 583 GGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQEVVPNENTYNILI 642

Query: 438 DIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCI 497
             H KA  +  A+  + +M   G      +Y+ +I  L K      A +LF +M  +   
Sbjct: 643 KGHCKARNMKEALYFHSEMIEKGFRLTASSYNALIRLLNKKKKFTEARRLFEKMRKERLT 702

Query: 498 PNLVTYNIMIALQAKARNYQSALKL 522
                YN  I L     N +S L L
Sbjct: 703 AEPDVYNFYIDLSFNEDNLESTLAL 727


>gi|302773712|ref|XP_002970273.1| hypothetical protein SELMODRAFT_411148 [Selaginella moellendorffii]
 gi|300161789|gb|EFJ28403.1| hypothetical protein SELMODRAFT_411148 [Selaginella moellendorffii]
          Length = 831

 Score =  150 bits (378), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 91/318 (28%), Positives = 159/318 (50%), Gaps = 2/318 (0%)

Query: 331 NQVLKQLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDG 390
           N + K  + H  A   F+ +  +  F  D  +Y+ ++    +  + G   KL  QM+   
Sbjct: 454 NSLCKAKKVHQ-AFAIFSTMVSERSFVPDVVSYSILIDGFCKIDELGRAEKLYKQMIDLN 512

Query: 391 CQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAM 450
           C PNV TYN  ++   R   + +A  V+++M   GC PD +TY TLI   + A   D A 
Sbjct: 513 CVPNVTTYNAFLNGLMRKGRIADAQGVYEEMVAAGCSPDVITYSTLIHGFSLARKHDQAH 572

Query: 451 DMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQ 510
           ++++ M + G  P+  TY+ +++ L K      AH+LF +MV +GC P+ VTY  ++   
Sbjct: 573 ELFETMISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVERGCDPDRVTYTTLLYGF 632

Query: 511 AKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDE 570
                 + A++++ +M + G +PD V Y+ +++     G   EA+ +F  M  +   PD 
Sbjct: 633 CNVGKIEQAVEVFDEMVSKGHDPDVVAYNCLLKGFFRAGKPGEAKQLFQVMVSRQCKPDT 692

Query: 571 PVYGLLVDLWGKAGNVRKAWEWYEAMLQA-GLRPNVPTCNSLLSAFLRVGQLSDAYHLLQ 629
             + +++D   KA  +  A E +E M Q  G  P++ T NSL+       +LS+A  + +
Sbjct: 693 VSHNIMIDGLSKAKRLDDAVEVFERMEQDHGCSPDLVTYNSLIFGLCGEQRLSEAMKVFK 752

Query: 630 GMLNLGLKPSLQTYTLLL 647
            +  L L P    + +LL
Sbjct: 753 EIDRLKLSPDPHAFNVLL 770



 Score =  146 bits (369), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 89/295 (30%), Positives = 153/295 (51%), Gaps = 3/295 (1%)

Query: 363 YTTMVGILGRARQFGAINKLLDQMVRD-GCQPNVVTYNRLIHSYGRANYLNEALDVFKQM 421
           Y +++  L +A++      +   MV +    P+VV+Y+ LI  + + + L  A  ++KQM
Sbjct: 449 YNSLLNSLCKAKKVHQAFAIFSTMVSERSFVPDVVSYSILIDGFCKIDELGRAEKLYKQM 508

Query: 422 QVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHL 481
             + C P+  TY   ++   + G +  A  +Y++M AAG SPD  TYS +I+    A   
Sbjct: 509 IDLNCVPNVTTYNAFLNGLMRKGRIADAQGVYEEMVAAGCSPDVITYSTLIHGFSLARKH 568

Query: 482 QAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIV 541
             AH+LF  M+++GC PN VTYN ++    K      A +L+R M   G +PD+VTY+ +
Sbjct: 569 DQAHELFETMISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVERGCDPDRVTYTTL 628

Query: 542 MEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGL 601
           +    + G +++A  VF EM  K   PD   Y  L+  + +AG   +A + ++ M+    
Sbjct: 629 LYGFCNVGKIEQAVEVFDEMVSKGHDPDVVAYNCLLKGFFRAGKPGEAKQLFQVMVSRQC 688

Query: 602 RPNVPTCNSLLSAFLRVGQLSDAYHLLQGM-LNLGLKPSLQTY-TLLLSCCTEAR 654
           +P+  + N ++    +  +L DA  + + M  + G  P L TY +L+   C E R
Sbjct: 689 KPDTVSHNIMIDGLSKAKRLDDAVEVFERMEQDHGCSPDLVTYNSLIFGLCGEQR 743



 Score =  117 bits (293), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 85/322 (26%), Positives = 155/322 (48%), Gaps = 13/322 (4%)

Query: 333 VLKQLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQ 392
           V+K L+D   AL FF WL+ +  FKHD  TY  ++  L R R      ++ ++MV  G  
Sbjct: 103 VIKHLRDGGEALTFFRWLQAR-NFKHDVFTYNCLLDKLIRHRDLKQAGQVFEKMVAQGVV 161

Query: 393 PNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAG----FLDV 448
           PN  TY  L+ S       +EA+  F +M   G +P    Y  + +     G    F  V
Sbjct: 162 PNGFTYAVLVQSSCYERNSDEAVRFFGEMVDKGFKPSSTLYQKVTECLKATGKEGEFSRV 221

Query: 449 -AMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMI 507
              D+ K++    +       ++++N + +   ++A+ +LF  MV  GC P+   Y+ M+
Sbjct: 222 FGRDLEKRVAVEMM----LKKALLVNFVIQDKAIEAS-KLFRAMVKSGCKPDATIYSYMV 276

Query: 508 ALQAKARNYQSALKLYRDMQNAGFEP-DKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNW 566
               K  N   A KL+ +M      P + V ++  +  L   G +++A      M+ ++ 
Sbjct: 277 LAHCKLENLDEAFKLFLEMAVESKAPLNNVAWTAFLSGLCKSGKIEQAFEACRTMQ-ESL 335

Query: 567 VPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYH 626
              +PVY +L+ L  ++G + KA E    +    ++P+  TC+S++    + G++  A  
Sbjct: 336 SSSQPVYDMLIRLLIESGRIDKAEEACLEIAGRNIQPSSGTCHSVIQELCKAGRVDSALS 395

Query: 627 LLQGMLNLGLKPSLQTYTLLLS 648
           LL+ M+  G  P + T+++L++
Sbjct: 396 LLETMIKRGYCPDMATHSMLIN 417



 Score =  115 bits (289), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 72/268 (26%), Positives = 126/268 (47%), Gaps = 46/268 (17%)

Query: 354 AGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNE 413
           AG   D  TY+T++     AR+    ++L + M+  GC+PN VTYN L+H   + +  +E
Sbjct: 546 AGCSPDVITYSTLIHGFSLARKHDQAHELFETMISRGCRPNAVTYNCLLHGLCKESKPDE 605

Query: 414 ALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIIN 473
           A ++F++M   GC+PDRVTY TL+      G ++ A++++ +M + G  PD   Y+ ++ 
Sbjct: 606 AHELFRKMVERGCDPDRVTYTTLLYGFCNVGKIEQAVEVFDEMVSKGHDPDVVAYNCLLK 665

Query: 474 CLGKAGHLQAAHQLFCEMV------------------------------------NQGCI 497
              +AG    A QLF  MV                                    + GC 
Sbjct: 666 GFFRAGKPGEAKQLFQVMVSRQCKPDTVSHNIMIDGLSKAKRLDDAVEVFERMEQDHGCS 725

Query: 498 PNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAV 557
           P+LVTYN +I      +    A+K+++++      PD   +++++E +  CG + + E  
Sbjct: 726 PDLVTYNSLIFGLCGEQRLSEAMKVFKEIDRLKLSPDPHAFNVLLEAI-KCGIVYQFEIR 784

Query: 558 FAEMRRKNWVPDEPVYGLLVDLWGKAGN 585
           F          D P + +L++    AG+
Sbjct: 785 F---------KDPPAFNVLMEAMHAAGH 803



 Score =  111 bits (277), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 73/289 (25%), Positives = 137/289 (47%), Gaps = 3/289 (1%)

Query: 362 TYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQM 421
           T  +++  L +A +  +   LL+ M++ G  P++ T++ LI+   +A+ + EA +  + M
Sbjct: 376 TCHSVIQELCKAGRVDSALSLLETMIKRGYCPDMATHSMLINELCKADKIQEAQEFLQGM 435

Query: 422 --QVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAA-GLSPDTFTYSVIINCLGKA 478
             ++        +Y +L++   KA  +  A  ++  M +     PD  +YS++I+   K 
Sbjct: 436 DRKISSRSSSCFSYNSLLNSLCKAKKVHQAFAIFSTMVSERSFVPDVVSYSILIDGFCKI 495

Query: 479 GHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTY 538
             L  A +L+ +M++  C+PN+ TYN  +    +      A  +Y +M  AG  PD +TY
Sbjct: 496 DELGRAEKLYKQMIDLNCVPNVTTYNAFLNGLMRKGRIADAQGVYEEMVAAGCSPDVITY 555

Query: 539 SIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQ 598
           S ++         D+A  +F  M  +   P+   Y  L+    K     +A E +  M++
Sbjct: 556 STLIHGFSLARKHDQAHELFETMISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVE 615

Query: 599 AGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
            G  P+  T  +LL  F  VG++  A  +   M++ G  P +  Y  LL
Sbjct: 616 RGCDPDRVTYTTLLYGFCNVGKIEQAVEVFDEMVSKGHDPDVVAYNCLL 664



 Score =  105 bits (263), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 76/307 (24%), Positives = 138/307 (44%), Gaps = 40/307 (13%)

Query: 380 NKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEP-DRVTYCTLID 438
           +KL   MV+ GC+P+   Y+ ++ ++ +   L+EA  +F +M V    P + V +   + 
Sbjct: 254 SKLFRAMVKSGCKPDATIYSYMVLAHCKLENLDEAFKLFLEMAVESKAPLNNVAWTAFLS 313

Query: 439 IHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIP 498
              K+G ++ A +  + MQ + LS     Y ++I  L ++G +  A +   E+  +   P
Sbjct: 314 GLCKSGKIEQAFEACRTMQES-LSSSQPVYDMLIRLLIESGRIDKAEEACLEIAGRNIQP 372

Query: 499 NLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVF 558
           +  T + +I    KA    SAL L   M   G+ PD  T+S+++  L     + EA+   
Sbjct: 373 SSGTCHSVIQELCKAGRVDSALSLLETMIKRGYCPDMATHSMLINELCKADKIQEAQEFL 432

Query: 559 AEMRRK--------------------------------------NWVPDEPVYGLLVDLW 580
             M RK                                      ++VPD   Y +L+D +
Sbjct: 433 QGMDRKISSRSSSCFSYNSLLNSLCKAKKVHQAFAIFSTMVSERSFVPDVVSYSILIDGF 492

Query: 581 GKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSL 640
            K   + +A + Y+ M+     PNV T N+ L+  +R G+++DA  + + M+  G  P +
Sbjct: 493 CKIDELGRAEKLYKQMIDLNCVPNVTTYNAFLNGLMRKGRIADAQGVYEEMVAAGCSPDV 552

Query: 641 QTYTLLL 647
            TY+ L+
Sbjct: 553 ITYSTLI 559



 Score =  103 bits (258), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 76/259 (29%), Positives = 125/259 (48%), Gaps = 3/259 (1%)

Query: 392 QPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMD 451
           QP+  T + +I    +A  ++ AL + + M   G  PD  T+  LI+   KA  +  A +
Sbjct: 371 QPSSGTCHSVIQELCKAGRVDSALSLLETMIKRGYCPDMATHSMLINELCKADKIQEAQE 430

Query: 452 MYKKM--QAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQ-GCIPNLVTYNIMIA 508
             + M  + +  S   F+Y+ ++N L KA  +  A  +F  MV++   +P++V+Y+I+I 
Sbjct: 431 FLQGMDRKISSRSSSCFSYNSLLNSLCKAKKVHQAFAIFSTMVSERSFVPDVVSYSILID 490

Query: 509 LQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVP 568
              K      A KLY+ M +    P+  TY+  +  L   G + +A+ V+ EM      P
Sbjct: 491 GFCKIDELGRAEKLYKQMIDLNCVPNVTTYNAFLNGLMRKGRIADAQGVYEEMVAAGCSP 550

Query: 569 DEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLL 628
           D   Y  L+  +  A    +A E +E M+  G RPN  T N LL    +  +  +A+ L 
Sbjct: 551 DVITYSTLIHGFSLARKHDQAHELFETMISRGCRPNAVTYNCLLHGLCKESKPDEAHELF 610

Query: 629 QGMLNLGLKPSLQTYTLLL 647
           + M+  G  P   TYT LL
Sbjct: 611 RKMVERGCDPDRVTYTTLL 629


>gi|125572252|gb|EAZ13767.1| hypothetical protein OsJ_03693 [Oryza sativa Japonica Group]
          Length = 715

 Score =  150 bits (378), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 124/498 (24%), Positives = 204/498 (40%), Gaps = 92/498 (18%)

Query: 359 DEHTYTTMV-GILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDV 417
           D +TYT ++ G+  R R  G    LLD M+  GCQP+VVTY  L+ +  ++    +A++V
Sbjct: 175 DAYTYTPIIRGLCDRGR-VGEALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEV 233

Query: 418 FKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGK 477
             +M+  GC P+ VTY  +I+   + G +D A +   ++ + G  PDT +Y+ ++  L  
Sbjct: 234 LDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCA 293

Query: 478 AGHLQAAHQLFCEMVNQGCIPNLVTY---------------------------------- 503
           A   +   +LF EM+ + C+PN VT+                                  
Sbjct: 294 AKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTL 353

Query: 504 -NIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMR 562
            NI+I    K      A +   +M + G  PD ++Y+ V++ L      ++A+ +  EM 
Sbjct: 354 CNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMV 413

Query: 563 RKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLS 622
           RKN  P+E  +   + +  + G + +A    E M + G   N+ T N+L++ F   G++ 
Sbjct: 414 RKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVD 473

Query: 623 DAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGFCHELMAVSGHPAHMFLLSMPS 682
            A  L   M     KP+  TYT LL+           G C+                   
Sbjct: 474 SALELFYSM---PCKPNTITYTTLLT-----------GLCN------------------- 500

Query: 683 PGPDGQNVRDHVGSFLEMMHSEDRESKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVY 742
                    D     L  M  +D        + +V F  + GL +EA  + E        
Sbjct: 501 -----AERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVE-------- 547

Query: 743 PDAVKEKGMSYWLINLHVMSDGTAVIALSRTLAWFRKQMLISGVGPSRIDIVTGWGRRSR 802
              + E G +  LI  + + DG      S         ++ +GV P   DIVT     S 
Sbjct: 548 --QMMEHGCTPNLITYNTLLDGITKDCNSEEALELLHGLVSNGVSP---DIVT----YSS 598

Query: 803 VTGTSLVRQAVQELLHMF 820
           + G       V+E + MF
Sbjct: 599 IIGVLSREDRVEEAIKMF 616



 Score =  146 bits (369), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 91/334 (27%), Positives = 156/334 (46%), Gaps = 33/334 (9%)

Query: 346 FFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSY 405
           F N L    GF+ D  +YTT++  L  A+++  + +L  +M+   C PN VT++ L+  +
Sbjct: 268 FLNRLS-SYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFF 326

Query: 406 GRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDT 465
            R   +  A+ V +QM   GC  +      +I+   K G +D A      M + G SPDT
Sbjct: 327 CRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDT 386

Query: 466 FTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRD 525
            +Y+ ++  L +A   + A +L  EMV + C PN VT+N  I +  +    + A  L   
Sbjct: 387 ISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQ 446

Query: 526 MQNAGFE--------------------------------PDKVTYSIVMEVLGHCGYLDE 553
           M   G E                                P+ +TY+ ++  L +   LD 
Sbjct: 447 MSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSMPCKPNTITYTTLLTGLCNAERLDA 506

Query: 554 AEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLS 613
           A  + AEM +K+  P+   + +LV  + + G + +A E  E M++ G  PN+ T N+LL 
Sbjct: 507 AAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNTLLD 566

Query: 614 AFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
              +     +A  LL G+++ G+ P + TY+ ++
Sbjct: 567 GITKDCNSEEALELLHGLVSNGVSPDIVTYSSII 600



 Score =  136 bits (342), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 83/293 (28%), Positives = 138/293 (47%), Gaps = 3/293 (1%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           G   D +  T ++  L R  +     ++L    R G   +V  YN L+  Y R   L+ A
Sbjct: 104 GEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAVDVFAYNTLVAGYCRYGQLDAA 163

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
             +   M V    PD  TY  +I      G +  A+ +   M   G  P   TY+V++  
Sbjct: 164 RRLIASMPVA---PDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQPSVVTYTVLLEA 220

Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPD 534
           + K+     A ++  EM  +GC PN+VTYN++I    +      A +    + + GF+PD
Sbjct: 221 VCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPD 280

Query: 535 KVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYE 594
            V+Y+ V++ L      ++ E +FAEM  KN +P+E  + +LV  + + G V +A +  E
Sbjct: 281 TVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLE 340

Query: 595 AMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
            M   G   N   CN +++   + G++ DA+  L  M + G  P   +YT +L
Sbjct: 341 QMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVL 393



 Score =  132 bits (332), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 94/360 (26%), Positives = 164/360 (45%), Gaps = 15/360 (4%)

Query: 290 HFASTGNVVESVSRILRQWKWGPLAEEALGNTNYSMDAYQANQVLKQ--LQDHTVALGFF 347
            F   G +VE   ++L Q      A       N ++     N + KQ  + D   A  F 
Sbjct: 324 RFFCRGGMVERAIQVLEQMSGHGCA------ANTTLCNIVINTICKQGRVDD---AFQFL 374

Query: 348 NWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGR 407
           N +    G   D  +YTT++  L RA ++    +LL +MVR  C PN VT+N  I    +
Sbjct: 375 NNMG-SYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQ 433

Query: 408 ANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFT 467
              + +A  + +QM   GCE + VTY  L++     G +D A++++  M      P+T T
Sbjct: 434 KGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSMPC---KPNTIT 490

Query: 468 YSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQ 527
           Y+ ++  L  A  L AA +L  EM+ + C PN+VT+N++++   +      A++L   M 
Sbjct: 491 YTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMM 550

Query: 528 NAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVR 587
             G  P+ +TY+ +++ +      +EA  +   +      PD   Y  ++ +  +   V 
Sbjct: 551 EHGCTPNLITYNTLLDGITKDCNSEEALELLHGLVSNGVSPDIVTYSSIIGVLSREDRVE 610

Query: 588 KAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
           +A + +  +   G+RP     N +L A  +      A      M++ G  P+  TY  L+
Sbjct: 611 EAIKMFHIVQDLGMRPKAVIYNKILLALCKRCNTDGAIDFFAYMVSNGCMPNELTYITLI 670



 Score =  129 bits (323), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 78/278 (28%), Positives = 140/278 (50%), Gaps = 3/278 (1%)

Query: 359 DEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVF 418
           +E T+ T + IL +         L++QM   GC+ N+VTYN L++ +     ++ AL++F
Sbjct: 420 NEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELF 479

Query: 419 KQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKA 478
             M    C+P+ +TY TL+     A  LD A ++  +M     +P+  T++V+++   + 
Sbjct: 480 YSMP---CKPNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQK 536

Query: 479 GHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTY 538
           G +  A +L  +M+  GC PNL+TYN ++    K  N + AL+L   + + G  PD VTY
Sbjct: 537 GLMDEAIELVEQMMEHGCTPNLITYNTLLDGITKDCNSEEALELLHGLVSNGVSPDIVTY 596

Query: 539 SIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQ 598
           S ++ VL     ++EA  +F  ++     P   +Y  ++    K  N   A +++  M+ 
Sbjct: 597 SSIIGVLSREDRVEEAIKMFHIVQDLGMRPKAVIYNKILLALCKRCNTDGAIDFFAYMVS 656

Query: 599 AGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGL 636
            G  PN  T  +L+        L +   LL+ + + G+
Sbjct: 657 NGCMPNELTYITLIEGLANEDFLKETRDLLRELCSRGV 694



 Score =  117 bits (294), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 70/301 (23%), Positives = 141/301 (46%), Gaps = 4/301 (1%)

Query: 381 KLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIH 440
           + L+ M   GC P+ ++Y  ++    RA    +A ++ K+M    C P+ VT+ T I I 
Sbjct: 372 QFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICIL 431

Query: 441 AKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNL 500
            + G ++ A  + ++M   G   +  TY+ ++N     G + +A +LF  M    C PN 
Sbjct: 432 CQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSM---PCKPNT 488

Query: 501 VTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAE 560
           +TY  ++     A    +A +L  +M      P+ VT+++++      G +DEA  +  +
Sbjct: 489 ITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQ 548

Query: 561 MRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQ 620
           M      P+   Y  L+D   K  N  +A E    ++  G+ P++ T +S++    R  +
Sbjct: 549 MMEHGCTPNLITYNTLLDGITKDCNSEEALELLHGLVSNGVSPDIVTYSSIIGVLSREDR 608

Query: 621 LSDAYHLLQGMLNLGLKPSLQTYT-LLLSCCTEARSPYDMGFCHELMAVSGHPAHMFLLS 679
           + +A  +   + +LG++P    Y  +LL+ C    +   + F   +++    P  +  ++
Sbjct: 609 VEEAIKMFHIVQDLGMRPKAVIYNKILLALCKRCNTDGAIDFFAYMVSNGCMPNELTYIT 668

Query: 680 M 680
           +
Sbjct: 669 L 669



 Score =  112 bits (281), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 69/251 (27%), Positives = 125/251 (49%), Gaps = 18/251 (7%)

Query: 329 QANQVLKQLQDHTVALGFFNWLRRQAGF------------------KHDEHTYTTMVGIL 370
           QA  +++Q+ +H   +    +     GF                  K +  TYTT++  L
Sbjct: 439 QATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSMPCKPNTITYTTLLTGL 498

Query: 371 GRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDR 430
             A +  A  +LL +M++  C PNVVT+N L+  + +   ++EA+++ +QM   GC P+ 
Sbjct: 499 CNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNL 558

Query: 431 VTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCE 490
           +TY TL+D   K    + A+++   + + G+SPD  TYS II  L +   ++ A ++F  
Sbjct: 559 ITYNTLLDGITKDCNSEEALELLHGLVSNGVSPDIVTYSSIIGVLSREDRVEEAIKMFHI 618

Query: 491 MVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGY 550
           + + G  P  V YN ++    K  N   A+  +  M + G  P+++TY  ++E L +  +
Sbjct: 619 VQDLGMRPKAVIYNKILLALCKRCNTDGAIDFFAYMVSNGCMPNELTYITLIEGLANEDF 678

Query: 551 LDEAEAVFAEM 561
           L E   +  E+
Sbjct: 679 LKETRDLLREL 689



 Score = 55.8 bits (133), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 32/108 (29%), Positives = 58/108 (53%), Gaps = 2/108 (1%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRD-GCQPNVVTYNRLIHSYGRANYLNE 413
           G   D  TY++++G+L R  +     K+   +V+D G +P  V YN+++ +  +    + 
Sbjct: 588 GVSPDIVTYSSIIGVLSREDRVEEAIKMF-HIVQDLGMRPKAVIYNKILLALCKRCNTDG 646

Query: 414 ALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGL 461
           A+D F  M   GC P+ +TY TLI+  A   FL    D+ +++ + G+
Sbjct: 647 AIDFFAYMVSNGCMPNELTYITLIEGLANEDFLKETRDLLRELCSRGV 694



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 55/219 (25%), Positives = 88/219 (40%), Gaps = 9/219 (4%)

Query: 519 ALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGY--LDEAEAVFAEMRRKNWVPDEPVYGLL 576
           A ++ R  + +G   D   Y+ +  V G+C Y  LD A  + A M      PD   Y  +
Sbjct: 128 AARVLRAAERSGTAVDVFAYNTL--VAGYCRYGQLDAARRLIASM---PVAPDAYTYTPI 182

Query: 577 VDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGL 636
           +      G V +A    + ML  G +P+V T   LL A  +      A  +L  M   G 
Sbjct: 183 IRGLCDRGRVGEALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGC 242

Query: 637 KPSLQTYTLLLS-CCTEARSPYDMGFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVG 695
            P++ TY ++++  C E R      F + L +    P  +   ++       +   D   
Sbjct: 243 TPNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEE 302

Query: 696 SFLEMMHSEDRESKRGLVDAVVDFLHKSGLKEEAGSVWE 734
            F EMM      ++    D +V F  + G+ E A  V E
Sbjct: 303 LFAEMMEKNCMPNEVTF-DMLVRFFCRGGMVERAIQVLE 340


>gi|224127136|ref|XP_002329409.1| predicted protein [Populus trichocarpa]
 gi|222870459|gb|EEF07590.1| predicted protein [Populus trichocarpa]
          Length = 599

 Score =  150 bits (378), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 94/332 (28%), Positives = 160/332 (48%), Gaps = 10/332 (3%)

Query: 323 YSMDAYQANQVLKQLQDHTVALGFFN---WLRR---QAGFKHDEHTYTTMVGILGRARQF 376
           + M+   AN ++K       +LG      W+ R   + G +    TY  ++  L  +   
Sbjct: 128 FLMNVSAANSLIKSFG----SLGMVEELLWVWRGMKENGVEPSLFTYNFLLNGLVNSVFI 183

Query: 377 GAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTL 436
            +  ++L+ M      P+VVTYN +I  Y +     +A + F+ M++    PD++TY TL
Sbjct: 184 ESAERVLEVMENGKIGPDVVTYNTMIKGYCQVGKTQKAFEKFRDMELRNVAPDKITYMTL 243

Query: 437 IDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGC 496
           I      G  D+ + +Y +M   GL      YS++I  L K G     + +F +M+ +GC
Sbjct: 244 IQACYAEGDFDLCLSLYHEMDENGLEIPPHAYSLVIGGLCKEGKCVEGYAVFEKMIQKGC 303

Query: 497 IPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEA 556
             N+  Y  +I   AK  N   A+ L+  M+  G EPD VTY +V+  +   G LDEA  
Sbjct: 304 KVNVAIYTALIDSNAKCGNMGEAMLLFERMKKEGLEPDVVTYGVVVNCMCKSGRLDEAME 363

Query: 557 VFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFL 616
                R      +  +Y  L+D  GKAG V +A + +E M++ G  P+    N+L+ A  
Sbjct: 364 YLEFCRVNGVAVNAMLYSSLIDGLGKAGRVHEAEKLFEEMVKKGCPPDSYCYNALIDALA 423

Query: 617 RVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
           + G+  +A    + M + G   ++ TYT++++
Sbjct: 424 KCGKTDEALAFFKRMEDEGCDQTVYTYTIMIN 455



 Score =  130 bits (327), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 101/414 (24%), Positives = 178/414 (42%)

Query: 342 VALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRL 401
           +AL FF W  +Q  + H+   Y + + +L        +  +  +    G   NV   N L
Sbjct: 79  LALKFFTWAGKQKKYTHNLQCYVSSIDVLAINGDLDNVKSVFCKFRGMGFLMNVSAANSL 138

Query: 402 IHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGL 461
           I S+G    + E L V++ M+  G EP   TY  L++    + F++ A  + + M+   +
Sbjct: 139 IKSFGSLGMVEELLWVWRGMKENGVEPSLFTYNFLLNGLVNSVFIESAERVLEVMENGKI 198

Query: 462 SPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALK 521
            PD  TY+ +I    + G  Q A + F +M  +   P+ +TY  +I       ++   L 
Sbjct: 199 GPDVVTYNTMIKGYCQVGKTQKAFEKFRDMELRNVAPDKITYMTLIQACYAEGDFDLCLS 258

Query: 522 LYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWG 581
           LY +M   G E     YS+V+  L   G   E  AVF +M +K    +  +Y  L+D   
Sbjct: 259 LYHEMDENGLEIPPHAYSLVIGGLCKEGKCVEGYAVFEKMIQKGCKVNVAIYTALIDSNA 318

Query: 582 KAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQ 641
           K GN+ +A   +E M + GL P+V T   +++   + G+L +A   L+     G+  +  
Sbjct: 319 KCGNMGEAMLLFERMKKEGLEPDVVTYGVVVNCMCKSGRLDEAMEYLEFCRVNGVAVNAM 378

Query: 642 TYTLLLSCCTEARSPYDMGFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMM 701
            Y+ L+    +A   ++     E M   G P   +  +            D   +F + M
Sbjct: 379 LYSSLIDGLGKAGRVHEAEKLFEEMVKKGCPPDSYCYNALIDALAKCGKTDEALAFFKRM 438

Query: 702 HSEDRESKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAVKEKGMSYWL 755
             E  +        +++ L +    EEA  +W++   K + P A   + +S  L
Sbjct: 439 EDEGCDQTVYTYTIMINGLFREHKNEEALKMWDMMIDKGITPTAAAFRALSIGL 492



 Score =  117 bits (292), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 96/384 (25%), Positives = 166/384 (43%), Gaps = 26/384 (6%)

Query: 283 GLAP--FSRHFASTGNV----VESVSRILRQWKWGPLAEEALGNTNYSMDAY----QANQ 332
           G+ P  F+ +F   G V    +ES  R+L   + G +  + +   N  +  Y    +  +
Sbjct: 162 GVEPSLFTYNFLLNGLVNSVFIESAERVLEVMENGKIGPDVV-TYNTMIKGYCQVGKTQK 220

Query: 333 VLKQLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQ 392
             ++ +D          LR  A    D+ TY T++        F     L  +M  +G +
Sbjct: 221 AFEKFRDME--------LRNVA---PDKITYMTLIQACYAEGDFDLCLSLYHEMDENGLE 269

Query: 393 PNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDM 452
                Y+ +I    +     E   VF++M   GC+ +   Y  LID +AK G +  AM +
Sbjct: 270 IPPHAYSLVIGGLCKEGKCVEGYAVFEKMIQKGCKVNVAIYTALIDSNAKCGNMGEAMLL 329

Query: 453 YKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQL--FCEMVNQGCIPNLVTYNIMIALQ 510
           +++M+  GL PD  TY V++NC+ K+G L  A +   FC +   G   N + Y+ +I   
Sbjct: 330 FERMKKEGLEPDVVTYGVVVNCMCKSGRLDEAMEYLEFCRV--NGVAVNAMLYSSLIDGL 387

Query: 511 AKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDE 570
            KA     A KL+ +M   G  PD   Y+ +++ L  CG  DEA A F  M  +      
Sbjct: 388 GKAGRVHEAEKLFEEMVKKGCPPDSYCYNALIDALAKCGKTDEALAFFKRMEDEGCDQTV 447

Query: 571 PVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQG 630
             Y ++++   +     +A + ++ M+  G+ P      +L       G+++ A  LL  
Sbjct: 448 YTYTIMINGLFREHKNEEALKMWDMMIDKGITPTAAAFRALSIGLCLSGKVARACKLLDE 507

Query: 631 MLNLGLKPSLQTYTLLLSCCTEAR 654
           +  +G+ P      +L   C   R
Sbjct: 508 LAPMGVIPETAFEDMLNVLCKAGR 531



 Score =  103 bits (257), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 69/283 (24%), Positives = 133/283 (46%), Gaps = 1/283 (0%)

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
           Q G K +   YT ++    +    G    L ++M ++G +P+VVTY  +++   ++  L+
Sbjct: 300 QKGCKVNVAIYTALIDSNAKCGNMGEAMLLFERMKKEGLEPDVVTYGVVVNCMCKSGRLD 359

Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
           EA++  +  +V G   + + Y +LID   KAG +  A  ++++M   G  PD++ Y+ +I
Sbjct: 360 EAMEYLEFCRVNGVAVNAMLYSSLIDGLGKAGRVHEAEKLFEEMVKKGCPPDSYCYNALI 419

Query: 473 NCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFE 532
           + L K G    A   F  M ++GC   + TY IMI    +    + ALK++  M + G  
Sbjct: 420 DALAKCGKTDEALAFFKRMEDEGCDQTVYTYTIMINGLFREHKNEEALKMWDMMIDKGIT 479

Query: 533 PDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEW 592
           P    +  +   L   G +  A  +  E+     +P E  +  ++++  KAG +++A + 
Sbjct: 480 PTAAAFRALSIGLCLSGKVARACKLLDELAPMGVIP-ETAFEDMLNVLCKAGRIKEACKL 538

Query: 593 YEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLG 635
            +  +  G          L++A  + G    A  L+   + +G
Sbjct: 539 ADGFVDRGREIPGRVRTVLINALRKAGNADLALKLMHSKIGIG 581



 Score = 82.8 bits (203), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 65/261 (24%), Positives = 123/261 (47%), Gaps = 8/261 (3%)

Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLI 402
           A+  F  ++++ G + D  TY  +V  + ++ +     + L+    +G   N + Y+ LI
Sbjct: 326 AMLLFERMKKE-GLEPDVVTYGVVVNCMCKSGRLDEAMEYLEFCRVNGVAVNAMLYSSLI 384

Query: 403 HSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLS 462
              G+A  ++EA  +F++M   GC PD   Y  LID  AK G  D A+  +K+M+  G  
Sbjct: 385 DGLGKAGRVHEAEKLFEEMVKKGCPPDSYCYNALIDALAKCGKTDEALAFFKRMEDEGCD 444

Query: 463 PDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKL 522
              +TY+++IN L +    + A +++  M+++G  P    +  +      +     A KL
Sbjct: 445 QTVYTYTIMINGLFREHKNEEALKMWDMMIDKGITPTAAAFRALSIGLCLSGKVARACKL 504

Query: 523 YRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAV---FAEMRRKNWVPDEPVYGLLVDL 579
             ++   G  P+   +  ++ VL   G + EA  +   F +  R+  +P   V  +L++ 
Sbjct: 505 LDELAPMGVIPE-TAFEDMLNVLCKAGRIKEACKLADGFVDRGRE--IPGR-VRTVLINA 560

Query: 580 WGKAGNVRKAWEWYEAMLQAG 600
             KAGN   A +   + +  G
Sbjct: 561 LRKAGNADLALKLMHSKIGIG 581


>gi|297849270|ref|XP_002892516.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297338358|gb|EFH68775.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 607

 Score =  150 bits (378), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 87/269 (32%), Positives = 146/269 (54%), Gaps = 4/269 (1%)

Query: 381 KLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIH 440
           +L   M +   +P+V TY+ LI++  + N ++ A  +F +M   G  P+ V + TLI  H
Sbjct: 296 RLKHHMEKSRTRPDVFTYSALINALCKENKMDGAHRLFYEMCERGLIPNDVIFTTLIHGH 355

Query: 441 AKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNL 500
           ++ G +D+  + Y+KM + GL PD   Y+ ++N   K G L AA  +   M+ +G  P+ 
Sbjct: 356 SRNGQIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDK 415

Query: 501 VTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHC--GYLDEAEAVF 558
           VTY  +I    +  +  +AL++ ++M   G E D+V +S +  + G C  G + +AE   
Sbjct: 416 VTYTTLIDGFCRGGDVDTALEIRKEMDQNGIELDRVGFSAL--ICGMCKEGRVIDAERAL 473

Query: 559 AEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRV 618
            EM R    PD+  Y +++D + K G+ +  ++  + M   G  PNV T N LL+   ++
Sbjct: 474 REMLRAGMKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHIPNVVTYNVLLNGLCKL 533

Query: 619 GQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
           GQ+ +A  LL  MLN+G+ P   TY  LL
Sbjct: 534 GQMKNADMLLDAMLNVGVVPDDITYNTLL 562



 Score =  133 bits (335), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 82/265 (30%), Positives = 136/265 (51%), Gaps = 4/265 (1%)

Query: 385 QMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAG 444
           +++  G   NV  +N L++ + +   + +A  VF ++      P  V++ TLI+ + K G
Sbjct: 230 EILDAGFPLNVYVFNILMNKFCKEGNICDAQKVFDEITKRSLRPTVVSFNTLINGYCKVG 289

Query: 445 FLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYN 504
            LDV   +   M+ +   PD FTYS +IN L K   +  AH+LF EM  +G IPN V + 
Sbjct: 290 NLDVGFRLKHHMEKSRTRPDVFTYSALINALCKENKMDGAHRLFYEMCERGLIPNDVIFT 349

Query: 505 IMIALQAKARNYQSAL--KLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMR 562
            +I     +RN Q  L  + Y+ M + G +PD V Y+ ++      G L  A  +   M 
Sbjct: 350 TLI--HGHSRNGQIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMI 407

Query: 563 RKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLS 622
           R+   PD+  Y  L+D + + G+V  A E  + M Q G+  +    ++L+    + G++ 
Sbjct: 408 RRGLRPDKVTYTTLIDGFCRGGDVDTALEIRKEMDQNGIELDRVGFSALICGMCKEGRVI 467

Query: 623 DAYHLLQGMLNLGLKPSLQTYTLLL 647
           DA   L+ ML  G+KP   TYT+++
Sbjct: 468 DAERALREMLRAGMKPDDVTYTMMM 492



 Score =  119 bits (297), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 73/268 (27%), Positives = 135/268 (50%), Gaps = 3/268 (1%)

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
           + G   ++  +TT++    R  Q   + +   +M+  G QP++V YN L++ + +   L 
Sbjct: 338 ERGLIPNDVIFTTLIHGHSRNGQIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLV 397

Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
            A ++   M   G  PD+VTY TLID   + G +D A+++ K+M   G+  D   +S +I
Sbjct: 398 AARNIVDGMIRRGLRPDKVTYTTLIDGFCRGGDVDTALEIRKEMDQNGIELDRVGFSALI 457

Query: 473 NCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFE 532
             + K G +  A +   EM+  G  P+ VTY +M+    K  + Q+  KL ++MQ+ G  
Sbjct: 458 CGMCKEGRVIDAERALREMLRAGMKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHI 517

Query: 533 PDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEW 592
           P+ VTY++++  L   G +  A+ +   M     VPD+  Y  L++   +  N   A + 
Sbjct: 518 PNVVTYNVLLNGLCKLGQMKNADMLLDAMLNVGVVPDDITYNTLLEGHHRHAN---ASKH 574

Query: 593 YEAMLQAGLRPNVPTCNSLLSAFLRVGQ 620
           Y+   + G+  ++ +  SL++   R  +
Sbjct: 575 YKQKPEIGIVADLASYKSLVNELYRASK 602



 Score =  117 bits (294), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 74/267 (27%), Positives = 126/267 (47%)

Query: 359 DEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVF 418
           D  TY+ ++  L +  +    ++L  +M   G  PN V +  LIH + R   ++   + +
Sbjct: 309 DVFTYSALINALCKENKMDGAHRLFYEMCERGLIPNDVIFTTLIHGHSRNGQIDLMKESY 368

Query: 419 KQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKA 478
           ++M   G +PD V Y TL++   K G L  A ++   M   GL PD  TY+ +I+   + 
Sbjct: 369 QKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKVTYTTLIDGFCRG 428

Query: 479 GHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTY 538
           G +  A ++  EM   G   + V ++ +I    K      A +  R+M  AG +PD VTY
Sbjct: 429 GDVDTALEIRKEMDQNGIELDRVGFSALICGMCKEGRVIDAERALREMLRAGMKPDDVTY 488

Query: 539 SIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQ 598
           +++M+     G       +  EM+    +P+   Y +L++   K G ++ A    +AML 
Sbjct: 489 TMMMDAFCKKGDAQTGFKLLKEMQSDGHIPNVVTYNVLLNGLCKLGQMKNADMLLDAMLN 548

Query: 599 AGLRPNVPTCNSLLSAFLRVGQLSDAY 625
            G+ P+  T N+LL    R    S  Y
Sbjct: 549 VGVVPDDITYNTLLEGHHRHANASKHY 575



 Score =  113 bits (283), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 83/342 (24%), Positives = 148/342 (43%), Gaps = 32/342 (9%)

Query: 340 HTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMV-RDGCQPNVVTY 398
           H     FF ++  Q  F+    TY  M   L     F     L++ +V R G       +
Sbjct: 98  HRSIFAFFKFISSQPEFRFTVETYFVMARFLAIHEMFVEAQSLIELVVSRKGKNSASSVF 157

Query: 399 NRLIHSYGR--ANYLNEALDVFKQMQVVGCEPDRVTYCTL-------IDIHAKAGFLDVA 449
             L+   G    ++L +AL +      +G  PD +    L       + I      LD  
Sbjct: 158 ISLVEMRGTPMCDFLVDALMI--TYMDLGFIPDVIQCFRLSRKHNFVVPIRGCGNLLDRM 215

Query: 450 MDM---------YKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNL 500
           M +         Y ++  AG   + + +++++N   K G++  A ++F E+  +   P +
Sbjct: 216 MKLNPTGTVWGFYMEILDAGFPLNVYVFNILMNKFCKEGNICDAQKVFDEITKRSLRPTV 275

Query: 501 VTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAE 560
           V++N +I    K  N     +L   M+ +   PD  TYS ++  L     +D A  +F E
Sbjct: 276 VSFNTLINGYCKVGNLDVGFRLKHHMEKSRTRPDVFTYSALINALCKENKMDGAHRLFYE 335

Query: 561 MRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQ 620
           M  +  +P++ ++  L+    + G +    E Y+ ML  GL+P++   N+L++ F + G 
Sbjct: 336 MCERGLIPNDVIFTTLIHGHSRNGQIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGD 395

Query: 621 LSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGFC 662
           L  A +++ GM+  GL+P   TYT L+            GFC
Sbjct: 396 LVAARNIVDGMIRRGLRPDKVTYTTLID-----------GFC 426


>gi|225454300|ref|XP_002275491.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
           mitochondrial [Vitis vinifera]
 gi|297745328|emb|CBI40408.3| unnamed protein product [Vitis vinifera]
          Length = 765

 Score =  150 bits (378), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 89/311 (28%), Positives = 151/311 (48%), Gaps = 1/311 (0%)

Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLI 402
            LG    +R Q     +  TY  ++    +A    A  +L DQM +DG  PNVVT N L+
Sbjct: 399 GLGLVERMRSQPRCMPNTVTYNCLIDGYCKASMIEAARELFDQMNKDGVPPNVVTLNTLV 458

Query: 403 HSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLS 462
               +   +N A++ F +MQ  G + + VTY  LI        ++ AM+++ +M  AG S
Sbjct: 459 DGMCKHGRINGAVEFFNEMQGKGLKGNAVTYTALIRAFCNVNNIEKAMELFDEMLEAGCS 518

Query: 463 PDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKL 522
           PD   Y  +I+ L +AG L  A  +  +M   G  P++V++N++I    +      A ++
Sbjct: 519 PDAIVYYTLISGLSQAGKLDRASFVLSKMKEAGFSPDIVSFNVLINGFCRKNKLDEAYEM 578

Query: 523 YRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGK 582
            ++M+NAG +PD VTY+ ++      G    A  +  +M ++  VP    YG L+  +  
Sbjct: 579 LKEMENAGIKPDGVTYNTLISHFSKTGDFSTAHRLMKKMVKEGLVPTVVTYGALIHAYCL 638

Query: 583 AGNVRKAWEWYEAMLQAG-LRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQ 641
            GN+ +A + +  M     + PN    N L+++  R  Q+  A  L+  M   G+KP+  
Sbjct: 639 NGNLDEAMKIFRDMSSTSKVPPNTVIYNILINSLCRKNQVDLALSLMDDMKVKGVKPNTN 698

Query: 642 TYTLLLSCCTE 652
           T+  +     E
Sbjct: 699 TFNAMFKGLQE 709



 Score =  144 bits (362), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 88/295 (29%), Positives = 148/295 (50%), Gaps = 8/295 (2%)

Query: 359 DEHTYTTMV-GILGRARQ---FGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           D  TY T++ G+    RQ    G + ++  Q     C PN VTYN LI  Y +A+ +  A
Sbjct: 379 DVITYNTLIDGLCKVGRQEEGLGLVERMRSQ---PRCMPNTVTYNCLIDGYCKASMIEAA 435

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
            ++F QM   G  P+ VT  TL+D   K G ++ A++ + +MQ  GL  +  TY+ +I  
Sbjct: 436 RELFDQMNKDGVPPNVVTLNTLVDGMCKHGRINGAVEFFNEMQGKGLKGNAVTYTALIRA 495

Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPD 534
                +++ A +LF EM+  GC P+ + Y  +I+  ++A     A  +   M+ AGF PD
Sbjct: 496 FCNVNNIEKAMELFDEMLEAGCSPDAIVYYTLISGLSQAGKLDRASFVLSKMKEAGFSPD 555

Query: 535 KVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYE 594
            V++++++        LDEA  +  EM      PD   Y  L+  + K G+   A    +
Sbjct: 556 IVSFNVLINGFCRKNKLDEAYEMLKEMENAGIKPDGVTYNTLISHFSKTGDFSTAHRLMK 615

Query: 595 AMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLG-LKPSLQTYTLLLS 648
            M++ GL P V T  +L+ A+   G L +A  + + M +   + P+   Y +L++
Sbjct: 616 KMVKEGLVPTVVTYGALIHAYCLNGNLDEAMKIFRDMSSTSKVPPNTVIYNILIN 670



 Score =  136 bits (343), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 82/289 (28%), Positives = 140/289 (48%), Gaps = 2/289 (0%)

Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLI 402
           A+ FFN ++ + G K +  TYT ++             +L D+M+  GC P+ + Y  LI
Sbjct: 470 AVEFFNEMQGK-GLKGNAVTYTALIRAFCNVNNIEKAMELFDEMLEAGCSPDAIVYYTLI 528

Query: 403 HSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLS 462
               +A  L+ A  V  +M+  G  PD V++  LI+   +   LD A +M K+M+ AG+ 
Sbjct: 529 SGLSQAGKLDRASFVLSKMKEAGFSPDIVSFNVLINGFCRKNKLDEAYEMLKEMENAGIK 588

Query: 463 PDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKL 522
           PD  TY+ +I+   K G    AH+L  +MV +G +P +VTY  +I       N   A+K+
Sbjct: 589 PDGVTYNTLISHFSKTGDFSTAHRLMKKMVKEGLVPTVVTYGALIHAYCLNGNLDEAMKI 648

Query: 523 YRDMQNAG-FEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWG 581
           +RDM +     P+ V Y+I++  L     +D A ++  +M+ K   P+   +  +     
Sbjct: 649 FRDMSSTSKVPPNTVIYNILINSLCRKNQVDLALSLMDDMKVKGVKPNTNTFNAMFKGLQ 708

Query: 582 KAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQG 630
           +   + KA+E  + M +    P+  T   L      VG+ +     +QG
Sbjct: 709 EKNWLSKAFELMDRMTEHACNPDYITMEILTEWLSAVGETAKLKSFVQG 757



 Score =  117 bits (294), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 87/344 (25%), Positives = 155/344 (45%), Gaps = 44/344 (12%)

Query: 364 TTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQV 423
           T ++  L R+ +      +L  +++ G      + N L+ + GRA        +  +M+ 
Sbjct: 274 TQLISRLCRSGRTDRAWDVLHGLMKLGGVMEAASCNALLTALGRAREFKRMNTLLAEMKE 333

Query: 424 VGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKM--------------------------- 456
           +  +P+ VT+  LI+   K   +D A+++++KM                           
Sbjct: 334 MDIQPNVVTFGILINHLCKFRRVDEALEVFEKMNGGESNGFLVEPDVITYNTLIDGLCKV 393

Query: 457 --QAAGLS------------PDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVT 502
             Q  GL             P+T TY+ +I+   KA  ++AA +LF +M   G  PN+VT
Sbjct: 394 GRQEEGLGLVERMRSQPRCMPNTVTYNCLIDGYCKASMIEAARELFDQMNKDGVPPNVVT 453

Query: 503 YNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMR 562
            N ++    K      A++ + +MQ  G + + VTY+ ++    +   +++A  +F EM 
Sbjct: 454 LNTLVDGMCKHGRINGAVEFFNEMQGKGLKGNAVTYTALIRAFCNVNNIEKAMELFDEML 513

Query: 563 RKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLS 622
                PD  VY  L+    +AG + +A      M +AG  P++ + N L++ F R  +L 
Sbjct: 514 EAGCSPDAIVYYTLISGLSQAGKLDRASFVLSKMKEAGFSPDIVSFNVLINGFCRKNKLD 573

Query: 623 DAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGFCHELM 666
           +AY +L+ M N G+KP   TY  L+S  ++     D    H LM
Sbjct: 574 EAYEMLKEMENAGIKPDGVTYNTLISHFSKTG---DFSTAHRLM 614



 Score = 85.9 bits (211), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 86/386 (22%), Positives = 157/386 (40%), Gaps = 12/386 (3%)

Query: 370 LGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPD 429
           +GRA     I  L+ +       PN +   +LI    R+   + A DV   +  +G   +
Sbjct: 245 VGRAVDEEEIVGLVSKFAEHEVFPNSIWLTQLISRLCRSGRTDRAWDVLHGLMKLGGVME 304

Query: 430 RVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFC 489
             +   L+    +A        +  +M+   + P+  T+ ++IN L K   +  A ++F 
Sbjct: 305 AASCNALLTALGRAREFKRMNTLLAEMKEMDIQPNVVTFGILINHLCKFRRVDEALEVF- 363

Query: 490 EMVNQG------CIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAG-FEPDKVTYSIVM 542
           E +N G        P+++TYN +I    K    +  L L   M++     P+ VTY+ ++
Sbjct: 364 EKMNGGESNGFLVEPDVITYNTLIDGLCKVGRQEEGLGLVERMRSQPRCMPNTVTYNCLI 423

Query: 543 EVLGHC--GYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAG 600
           +  G+C    ++ A  +F +M +    P+      LVD   K G +  A E++  M   G
Sbjct: 424 D--GYCKASMIEAARELFDQMNKDGVPPNVVTLNTLVDGMCKHGRINGAVEFFNEMQGKG 481

Query: 601 LRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMG 660
           L+ N  T  +L+ AF  V  +  A  L   ML  G  P    Y  L+S  ++A       
Sbjct: 482 LKGNAVTYTALIRAFCNVNNIEKAMELFDEMLEAGCSPDAIVYYTLISGLSQAGKLDRAS 541

Query: 661 FCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRESKRGLVDAVVDFL 720
           F    M  +G    +   ++   G   +N  D     L+ M +   +      + ++   
Sbjct: 542 FVLSKMKEAGFSPDIVSFNVLINGFCRKNKLDEAYEMLKEMENAGIKPDGVTYNTLISHF 601

Query: 721 HKSGLKEEAGSVWEVAAQKNVYPDAV 746
            K+G    A  + +   ++ + P  V
Sbjct: 602 SKTGDFSTAHRLMKKMVKEGLVPTVV 627



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 99/486 (20%), Positives = 185/486 (38%), Gaps = 116/486 (23%)

Query: 270 RFSKPSREMKIPAGLAPFSRHFAS--------------TGNVVESVSRILR----QWKWG 311
           RF +P    + P  L+   RH ++              + +VV  V  +L+     W   
Sbjct: 16  RFLRP----QTPPNLSSLLRHLSAEPDHHPPAPPPQNDSSSVVNLVVELLQTTDNDWNED 71

Query: 312 PLAEEALGNTNYSMDAYQANQVLKQLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILG 371
            L +     T+     +   Q+ + L     AL FFNW++  +  +       T+  +  
Sbjct: 72  KLHQLLFPTTSPPPPPHNLLQITRLLGSTAKALKFFNWVQANSPCQDSPLLSFTLEAVFE 131

Query: 372 RA-RQFGAINKLLDQMVRDGCQPNVVTYNR---LIHSYGRANYLNEALDVFKQMQVVGCE 427
            A R+  + NKLLD           ++ N    LI  +GRA  ++E+  V+ ++    C 
Sbjct: 132 HASREPNSHNKLLDLFKTSKSHKIPLSVNAATLLIRCFGRAQMVDESFLVYNEL----CP 187

Query: 428 PDRVTYC--TLIDIHAKAGFLDVAMDMYKKM--QAAGLSPDTFTYSVIINCLGKAGHLQ- 482
             R+T+    LID+  + G +D A+ +  +M    A   P++ T  ++ + L K   +  
Sbjct: 188 SRRLTHIRNILIDVLFRKGRVDDALHLLDEMLQPKAEFPPNSNTGHIVFSALSKRDKVGR 247

Query: 483 --------------AAHQLF------CEMVNQGC--------------------IPNLVT 502
                         A H++F       +++++ C                    +    +
Sbjct: 248 AVDEEEIVGLVSKFAEHEVFPNSIWLTQLISRLCRSGRTDRAWDVLHGLMKLGGVMEAAS 307

Query: 503 YNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMR 562
            N ++    +AR ++    L  +M+    +P+ VT+ I++  L     +DEA  VF +M 
Sbjct: 308 CNALLTALGRAREFKRMNTLLAEMKEMDIQPNVVTFGILINHLCKFRRVDEALEVFEKMN 367

Query: 563 -----------------------------------------RKNWVPDEPVYGLLVDLWG 581
                                                    +   +P+   Y  L+D + 
Sbjct: 368 GGESNGFLVEPDVITYNTLIDGLCKVGRQEEGLGLVERMRSQPRCMPNTVTYNCLIDGYC 427

Query: 582 KAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQ 641
           KA  +  A E ++ M + G+ PNV T N+L+    + G+++ A      M   GLK +  
Sbjct: 428 KASMIEAARELFDQMNKDGVPPNVVTLNTLVDGMCKHGRINGAVEFFNEMQGKGLKGNAV 487

Query: 642 TYTLLL 647
           TYT L+
Sbjct: 488 TYTALI 493


>gi|115482066|ref|NP_001064626.1| Os10g0421800 [Oryza sativa Japonica Group]
 gi|113639235|dbj|BAF26540.1| Os10g0421800, partial [Oryza sativa Japonica Group]
          Length = 973

 Score =  150 bits (378), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 87/301 (28%), Positives = 155/301 (51%)

Query: 349 WLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRA 408
           W  +++  K D  TY T++   G      ++ ++ + M  DG   NVV Y  +I +  + 
Sbjct: 324 WKMKKSDQKPDRVTYITLLDKFGDNGDSQSVMEIWNAMKADGYNDNVVAYTAVIDALCQV 383

Query: 409 NYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTY 468
             + EAL++F +M+  G  P++ +Y +LI    KA     A++++K M   G  P+ +T+
Sbjct: 384 GRVFEALEMFDEMKQKGIVPEQYSYNSLISGFLKADRFGDALELFKHMDIHGPKPNGYTH 443

Query: 469 SVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQN 528
            + IN  GK+G    A Q +  M ++G +P++V  N ++   AK+     A +++ +++ 
Sbjct: 444 VLFINYYGKSGESIKAIQRYELMKSKGIVPDVVAGNAVLFGLAKSGRLGMAKRVFHELKA 503

Query: 529 AGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRK 588
            G  PD +TY+++++        DEA  +F +M   N VPD      L+D   KAG   +
Sbjct: 504 MGVSPDTITYTMMIKCCSKASKFDEAVKIFYDMIENNCVPDVLAVNSLIDTLYKAGRGDE 563

Query: 589 AWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
           AW  +  + +  L P   T N+LL+   R G++ +  HLL+ M +    P+L TY  +L 
Sbjct: 564 AWRIFYQLKEMNLEPTDGTYNTLLAGLGREGKVKEVMHLLEEMYHSNYPPNLITYNTILD 623

Query: 649 C 649
           C
Sbjct: 624 C 624



 Score =  149 bits (376), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 89/313 (28%), Positives = 159/313 (50%), Gaps = 39/313 (12%)

Query: 349 WLRRQA---GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSY 405
           WL R+    G K + ++YT  + +LG+A++F    ++L +M  +GC+P+V+T+  LI   
Sbjct: 251 WLLREMEAHGVKPNVYSYTICIRVLGQAKRFDEAYRILAKMENEGCKPDVITHTVLIQVL 310

Query: 406 GRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDT 465
             A  +++A DVF +M+    +PDRVTY TL+D     G     M+++  M+A G + + 
Sbjct: 311 CDAGRISDAKDVFWKMKKSDQKPDRVTYITLLDKFGDNGDSQSVMEIWNAMKADGYNDNV 370

Query: 466 FTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRD 525
             Y+ +I+ L + G +  A ++F EM  +G +P   +YN +I+   KA  +  AL+L++ 
Sbjct: 371 VAYTAVIDALCQVGRVFEALEMFDEMKQKGIVPEQYSYNSLISGFLKADRFGDALELFKH 430

Query: 526 MQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGN 585
           M   G +P+  T+                                    L ++ +GK+G 
Sbjct: 431 MDIHGPKPNGYTHV-----------------------------------LFINYYGKSGE 455

Query: 586 VRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTL 645
             KA + YE M   G+ P+V   N++L    + G+L  A  +   +  +G+ P   TYT+
Sbjct: 456 SIKAIQRYELMKSKGIVPDVVAGNAVLFGLAKSGRLGMAKRVFHELKAMGVSPDTITYTM 515

Query: 646 LLSCCTEARSPYD 658
           ++ CC++A S +D
Sbjct: 516 MIKCCSKA-SKFD 527



 Score =  145 bits (366), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 86/302 (28%), Positives = 155/302 (51%), Gaps = 3/302 (0%)

Query: 355 GFKHDEHTYTTMVGILGR-ARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNE 413
           G+  +   YT ++  L +  R F A+ ++ D+M + G  P   +YN LI  + +A+   +
Sbjct: 365 GYNDNVVAYTAVIDALCQVGRVFEAL-EMFDEMKQKGIVPEQYSYNSLISGFLKADRFGD 423

Query: 414 ALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIIN 473
           AL++FK M + G +P+  T+   I+ + K+G    A+  Y+ M++ G+ PD    + ++ 
Sbjct: 424 ALELFKHMDIHGPKPNGYTHVLFINYYGKSGESIKAIQRYELMKSKGIVPDVVAGNAVLF 483

Query: 474 CLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEP 533
            L K+G L  A ++F E+   G  P+ +TY +MI   +KA  +  A+K++ DM      P
Sbjct: 484 GLAKSGRLGMAKRVFHELKAMGVSPDTITYTMMIKCCSKASKFDEAVKIFYDMIENNCVP 543

Query: 534 DKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWY 593
           D +  + +++ L   G  DEA  +F +++  N  P +  Y  L+   G+ G V++     
Sbjct: 544 DVLAVNSLIDTLYKAGRGDEAWRIFYQLKEMNLEPTDGTYNTLLAGLGREGKVKEVMHLL 603

Query: 594 EAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTY-TLLLSCCTE 652
           E M  +   PN+ T N++L    + G ++DA  +L  M   G  P L +Y T++     E
Sbjct: 604 EEMYHSNYPPNLITYNTILDCLCKNGAVNDALDMLYSMTTKGCIPDLSSYNTVIYGLVKE 663

Query: 653 AR 654
            R
Sbjct: 664 ER 665



 Score =  135 bits (341), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 81/302 (26%), Positives = 153/302 (50%), Gaps = 1/302 (0%)

Query: 347 FNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYG 406
           F+ ++RQ   K +  T+  + G LG      +    L  M   G   N  TYN L++   
Sbjct: 148 FDVMQRQI-VKANVGTFAAIFGGLGVEGGLRSAPVALPVMKEAGIVLNAYTYNGLVYFLV 206

Query: 407 RANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTF 466
           ++ +  EAL+V++ M V G  P   TY  L+    K   ++  + + ++M+A G+ P+ +
Sbjct: 207 KSGFDREALEVYRVMMVDGVVPSVRTYSVLMVAFGKRRDVETVLWLLREMEAHGVKPNVY 266

Query: 467 TYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDM 526
           +Y++ I  LG+A     A+++  +M N+GC P+++T+ ++I +   A     A  ++  M
Sbjct: 267 SYTICIRVLGQAKRFDEAYRILAKMENEGCKPDVITHTVLIQVLCDAGRISDAKDVFWKM 326

Query: 527 QNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNV 586
           + +  +PD+VTY  +++  G  G       ++  M+   +  +   Y  ++D   + G V
Sbjct: 327 KKSDQKPDRVTYITLLDKFGDNGDSQSVMEIWNAMKADGYNDNVVAYTAVIDALCQVGRV 386

Query: 587 RKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLL 646
            +A E ++ M Q G+ P   + NSL+S FL+  +  DA  L + M   G KP+  T+ L 
Sbjct: 387 FEALEMFDEMKQKGIVPEQYSYNSLISGFLKADRFGDALELFKHMDIHGPKPNGYTHVLF 446

Query: 647 LS 648
           ++
Sbjct: 447 IN 448



 Score =  130 bits (326), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 79/305 (25%), Positives = 155/305 (50%), Gaps = 2/305 (0%)

Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLI 402
           AL  F+ ++ Q G   ++++Y +++    +A +FG   +L   M   G +PN  T+   I
Sbjct: 389 ALEMFDEMK-QKGIVPEQYSYNSLISGFLKADRFGDALELFKHMDIHGPKPNGYTHVLFI 447

Query: 403 HSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLS 462
           + YG++    +A+  ++ M+  G  PD V    ++   AK+G L +A  ++ +++A G+S
Sbjct: 448 NYYGKSGESIKAIQRYELMKSKGIVPDVVAGNAVLFGLAKSGRLGMAKRVFHELKAMGVS 507

Query: 463 PDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKL 522
           PDT TY+++I C  KA     A ++F +M+   C+P+++  N +I    KA     A ++
Sbjct: 508 PDTITYTMMIKCCSKASKFDEAVKIFYDMIENNCVPDVLAVNSLIDTLYKAGRGDEAWRI 567

Query: 523 YRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGK 582
           +  ++    EP   TY+ ++  LG  G + E   +  EM   N+ P+   Y  ++D   K
Sbjct: 568 FYQLKEMNLEPTDGTYNTLLAGLGREGKVKEVMHLLEEMYHSNYPPNLITYNTILDCLCK 627

Query: 583 AGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQT 642
            G V  A +   +M   G  P++ + N+++   ++  + ++A+ +   M  + L P   T
Sbjct: 628 NGAVNDALDMLYSMTTKGCIPDLSSYNTVIYGLVKEERYNEAFSIFCQMKKV-LIPDYAT 686

Query: 643 YTLLL 647
              +L
Sbjct: 687 LCTIL 691



 Score =  129 bits (325), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 103/406 (25%), Positives = 184/406 (45%), Gaps = 4/406 (0%)

Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLI 402
           AL  F    R+    H   +   M+ ++    + G + ++ D M R   + NV T+  + 
Sbjct: 108 ALERFRSAARKPRVAHTTASCNYMLELMRGHGRVGDMAEVFDVMQRQIVKANVGTFAAIF 167

Query: 403 HSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLS 462
              G    L  A      M+  G   +  TY  L+    K+GF   A+++Y+ M   G+ 
Sbjct: 168 GGLGVEGGLRSAPVALPVMKEAGIVLNAYTYNGLVYFLVKSGFDREALEVYRVMMVDGVV 227

Query: 463 PDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKL 522
           P   TYSV++   GK   ++    L  EM   G  PN+ +Y I I +  +A+ +  A ++
Sbjct: 228 PSVRTYSVLMVAFGKRRDVETVLWLLREMEAHGVKPNVYSYTICIRVLGQAKRFDEAYRI 287

Query: 523 YRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGK 582
              M+N G +PD +T++++++VL   G + +A+ VF +M++ +  PD   Y  L+D +G 
Sbjct: 288 LAKMENEGCKPDVITHTVLIQVLCDAGRISDAKDVFWKMKKSDQKPDRVTYITLLDKFGD 347

Query: 583 AGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQT 642
            G+ +   E + AM   G   NV    +++ A  +VG++ +A  +   M   G+ P   +
Sbjct: 348 NGDSQSVMEIWNAMKADGYNDNVVAYTAVIDALCQVGRVFEALEMFDEMKQKGIVPEQYS 407

Query: 643 YTLLLSCCTEARSPYDMGFCHELMAVSGHP--AHMFLLSMPSPGPDGQNVRDHVGSFLEM 700
           Y  L+S   +A    D     + M + G     +  +L +   G  G++++       E+
Sbjct: 408 YNSLISGFLKADRFGDALELFKHMDIHGPKPNGYTHVLFINYYGKSGESIK--AIQRYEL 465

Query: 701 MHSEDRESKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAV 746
           M S+         +AV+  L KSG    A  V+       V PD +
Sbjct: 466 MKSKGIVPDVVAGNAVLFGLAKSGRLGMAKRVFHELKAMGVSPDTI 511



 Score =  107 bits (267), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 66/230 (28%), Positives = 113/230 (49%), Gaps = 2/230 (0%)

Query: 316 EALGNTNYSMDAYQANQVLKQLQDHTVALGFFNWLRRQAGFKHDEHT--YTTMVGILGRA 373
           E + ++  ++D +    ++K L     AL     +++   F     T  Y +++  L   
Sbjct: 744 EIIASSGITLDDFFLCPLIKHLCKQKKALEAHELVKKFKSFGVSLKTGLYNSLICGLVDE 803

Query: 374 RQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTY 433
                   L  +M   GC P+  TYN L+ + G++  + E L V ++M   G E   VTY
Sbjct: 804 NLIDIAEGLFAEMKELGCGPDEFTYNLLLDAMGKSMRIEEMLKVQEEMHRKGYESTYVTY 863

Query: 434 CTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVN 493
            T+I    K+  L+ A+D+Y  + + G SP   TY  +++ L KAG ++ A  LF EM+ 
Sbjct: 864 NTIISGLVKSRRLEQAIDLYYNLMSQGFSPTPCTYGPLLDGLLKAGRIEDAENLFNEMLE 923

Query: 494 QGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVME 543
            GC  N   YNI++     A N +    L++DM + G  PD  +Y+I+++
Sbjct: 924 YGCKANCTIYNILLNGHRIAGNTEKVCHLFQDMVDQGINPDIKSYTIIID 973



 Score =  104 bits (260), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 72/289 (24%), Positives = 134/289 (46%), Gaps = 4/289 (1%)

Query: 363 YTTMVGILGRARQFG----AINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVF 418
           Y T+  IL    + G    A++ + D  ++ G + +  + + L+    +   + ++++  
Sbjct: 684 YATLCTILPSFVKIGLMKEALHIIKDYFLQPGSKTDRSSCHSLMEGILKKAGIEKSIEFA 743

Query: 419 KQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKA 478
           + +   G   D    C LI    K      A ++ KK ++ G+S  T  Y+ +I  L   
Sbjct: 744 EIIASSGITLDDFFLCPLIKHLCKQKKALEAHELVKKFKSFGVSLKTGLYNSLICGLVDE 803

Query: 479 GHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTY 538
             +  A  LF EM   GC P+  TYN+++    K+   +  LK+  +M   G+E   VTY
Sbjct: 804 NLIDIAEGLFAEMKELGCGPDEFTYNLLLDAMGKSMRIEEMLKVQEEMHRKGYESTYVTY 863

Query: 539 SIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQ 598
           + ++  L     L++A  ++  +  + + P    YG L+D   KAG +  A   +  ML+
Sbjct: 864 NTIISGLVKSRRLEQAIDLYYNLMSQGFSPTPCTYGPLLDGLLKAGRIEDAENLFNEMLE 923

Query: 599 AGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
            G + N    N LL+     G      HL Q M++ G+ P +++YT+++
Sbjct: 924 YGCKANCTIYNILLNGHRIAGNTEKVCHLFQDMVDQGINPDIKSYTIII 972



 Score =  103 bits (256), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 81/326 (24%), Positives = 136/326 (41%), Gaps = 43/326 (13%)

Query: 362 TYTTMVGILGRARQFGAINKLLDQ---MVRDGCQPNVVTYNRLIHSYGRANYLNEALDVF 418
           TY T++  L +    GA+N  LD    M   GC P++ +YN +I+   +    NEA  +F
Sbjct: 617 TYNTILDCLCKN---GAVNDALDMLYSMTTKGCIPDLSSYNTVIYGLVKEERYNEAFSIF 673

Query: 419 KQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKK----------------------- 455
            QM+ V   PD  T CT++    K G +  A+ + K                        
Sbjct: 674 CQMKKV-LIPDYATLCTILPSFVKIGLMKEALHIIKDYFLQPGSKTDRSSCHSLMEGILK 732

Query: 456 -------------MQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVT 502
                        + ++G++ D F    +I  L K      AH+L  +  + G       
Sbjct: 733 KAGIEKSIEFAEIIASSGITLDDFFLCPLIKHLCKQKKALEAHELVKKFKSFGVSLKTGL 792

Query: 503 YNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMR 562
           YN +I           A  L+ +M+  G  PD+ TY+++++ +G    ++E   V  EM 
Sbjct: 793 YNSLICGLVDENLIDIAEGLFAEMKELGCGPDEFTYNLLLDAMGKSMRIEEMLKVQEEMH 852

Query: 563 RKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLS 622
           RK +      Y  ++    K+  + +A + Y  ++  G  P   T   LL   L+ G++ 
Sbjct: 853 RKGYESTYVTYNTIISGLVKSRRLEQAIDLYYNLMSQGFSPTPCTYGPLLDGLLKAGRIE 912

Query: 623 DAYHLLQGMLNLGLKPSLQTYTLLLS 648
           DA +L   ML  G K +   Y +LL+
Sbjct: 913 DAENLFNEMLEYGCKANCTIYNILLN 938



 Score =  103 bits (256), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 85/357 (23%), Positives = 146/357 (40%), Gaps = 39/357 (10%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           +  G   D  TYT M+    +A +F    K+   M+ + C P+V+  N LI +  +A   
Sbjct: 502 KAMGVSPDTITYTMMIKCCSKASKFDEAVKIFYDMIENNCVPDVLAVNSLIDTLYKAGRG 561

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
           +EA  +F Q++ +  EP   TY TL+    + G +   M + ++M  +   P+  TY+ I
Sbjct: 562 DEAWRIFYQLKEMNLEPTDGTYNTLLAGLGREGKVKEVMHLLEEMYHSNYPPNLITYNTI 621

Query: 472 INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF 531
           ++CL K G +  A  +   M  +GCIP+L +YN +I    K   Y  A  ++  M+    
Sbjct: 622 LDCLCKNGAVNDALDMLYSMTTKGCIPDLSSYNTVIYGLVKEERYNEAFSIFCQMKKV-L 680

Query: 532 EPDKVTYSIVMEVLGHCGYLDEAEAVFAE--MRRKNWVPDEPVYGLLVDLWGKAGNVRKA 589
            PD  T   ++      G + EA  +  +  ++  +       + L+  +  KAG + K+
Sbjct: 681 IPDYATLCTILPSFVKIGLMKEALHIIKDYFLQPGSKTDRSSCHSLMEGILKKAG-IEKS 739

Query: 590 WEWYEAMLQAGLR-PNVPTC----------------------------------NSLLSA 614
            E+ E +  +G+   +   C                                  NSL+  
Sbjct: 740 IEFAEIIASSGITLDDFFLCPLIKHLCKQKKALEAHELVKKFKSFGVSLKTGLYNSLICG 799

Query: 615 FLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGFCHELMAVSGH 671
            +    +  A  L   M  LG  P   TY LLL    ++    +M    E M   G+
Sbjct: 800 LVDENLIDIAEGLFAEMKELGCGPDEFTYNLLLDAMGKSMRIEEMLKVQEEMHRKGY 856


>gi|297723047|ref|NP_001173887.1| Os04g0351333 [Oryza sativa Japonica Group]
 gi|255675359|dbj|BAH92615.1| Os04g0351333 [Oryza sativa Japonica Group]
          Length = 740

 Score =  150 bits (378), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 102/340 (30%), Positives = 153/340 (45%), Gaps = 39/340 (11%)

Query: 354 AGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNE 413
           +G   D  TY+ ++  L +++      ++L+QMV  G +PN +TYN LIH Y  +   NE
Sbjct: 112 SGIAPDLFTYSLIIDGLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNE 171

Query: 414 ALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIIN 473
           ++ VFKQM   G  P      + I    K G  + A  ++  M   G  PD  +YS +++
Sbjct: 172 SVRVFKQMSSCGVIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLH 231

Query: 474 CLGKAGH--LQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF 531
               A    L   H +F  M+ +G  PN   +NI+I   A+      A+ ++ DMQN G 
Sbjct: 232 GYATATDSCLADVHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGM 291

Query: 532 EPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWE 591
            PD VT++ V+  L   G LD+A   F  M      P E VYG L+      G + KA E
Sbjct: 292 IPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKE 351

Query: 592 WY------------------------------------EAMLQAGLRPNVPTCNSLLSAF 615
                                                 + M+Q G RPNV T NSL+  +
Sbjct: 352 LISEMMNKDIPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGY 411

Query: 616 LRVGQLSDAYHLLQGMLNLGLKPSLQTY-TLLLSCCTEAR 654
             VG + +A+ LL  M ++G++P+   Y TL+   C   R
Sbjct: 412 CLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGR 451



 Score =  132 bits (332), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 89/366 (24%), Positives = 171/366 (46%), Gaps = 3/366 (0%)

Query: 382 LLDQMVRDGCQPNVVTYNRLIHSYGRA--NYLNEALDVFKQMQVVGCEPDRVTYCTLIDI 439
           + D MV  G +P++++Y+ ++H Y  A  + L +  ++F  M   G  P++  +  LI+ 
Sbjct: 210 IFDSMVLKGPKPDIISYSTMLHGYATATDSCLADVHNIFNLMLTKGIAPNKHVFNILINA 269

Query: 440 HAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPN 499
           +A+ G +D AM +++ MQ  G+ PDT T++ +I+ L + G L  A   F  MV+ G  P+
Sbjct: 270 YARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPS 329

Query: 500 LVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTY-SIVMEVLGHCGYLDEAEAVF 558
              Y  +I           A +L  +M N    P  V Y S ++  L   G + E + + 
Sbjct: 330 EAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIINNLCKEGRVAEGKDIM 389

Query: 559 AEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRV 618
             M +    P+   +  L++ +   GN+ +A+   +AM   G+ PN     +L+  + + 
Sbjct: 390 DMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKN 449

Query: 619 GQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGFCHELMAVSGHPAHMFLL 678
           G++ DA  + + ML+ G+KP+   Y+++L    +AR           M  SG    +   
Sbjct: 450 GRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAAKKMFHEMIESGTTVSIHTY 509

Query: 679 SMPSPGPDGQNVRDHVGSFLEMMHSEDRESKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQ 738
            +   G    N  D     LE + + + +      + V+  + K G ++EA  +++  + 
Sbjct: 510 GVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMFKVGRRQEAKELFDAIST 569

Query: 739 KNVYPD 744
             + P+
Sbjct: 570 YGLVPN 575



 Score =  117 bits (292), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 85/341 (24%), Positives = 158/341 (46%), Gaps = 30/341 (8%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINK---LLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           G   D+ +Y+ + G +    + G ++K   L  +M+  G  P ++  N +I    +   +
Sbjct: 44  GLGPDDFSYSLIYGFV----KDGEVDKAHCLFLEMMEQGVLPKILICNSIIKELCKMKEM 99

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
           ++A  + ++M   G  PD  TY  +ID   K+  +D A  + ++M  AG  P++ TY+ +
Sbjct: 100 DKAESIVQKMVDSGIAPDLFTYSLIIDGLCKSKAMDKAERVLEQMVEAGTRPNSITYNSL 159

Query: 472 INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF 531
           I+    +G    + ++F +M + G IP +   N  I    K      A  ++  M   G 
Sbjct: 160 IHGYSISGMWNESVRVFKQMSSCGVIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGP 219

Query: 532 EPDKVTYSIVMEVLGHCGY-------LDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAG 584
           +PD ++YS ++      GY       L +   +F  M  K   P++ V+ +L++ + + G
Sbjct: 220 KPDIISYSTMLH-----GYATATDSCLADVHNIFNLMLTKGIAPNKHVFNILINAYARCG 274

Query: 585 NVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYT 644
            + KA   +E M   G+ P+  T  +++S+  R+G+L DA H    M+++G+ PS   Y 
Sbjct: 275 MMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYG 334

Query: 645 LLLS-CCTEARSPYDMGFCHELMAVSGHPAHMFLLSMPSPG 684
            L+  CC             EL+      + M    +P PG
Sbjct: 335 CLIQGCCNHG----------ELVKAKELISEMMNKDIPPPG 365



 Score =  112 bits (281), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 84/299 (28%), Positives = 141/299 (47%), Gaps = 9/299 (3%)

Query: 355 GFKHDEHTYTTMVGILGRARQ--FGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
           G K D  +Y+TM+     A       ++ + + M+  G  PN   +N LI++Y R   ++
Sbjct: 218 GPKPDIISYSTMLHGYATATDSCLADVHNIFNLMLTKGIAPNKHVFNILINAYARCGMMD 277

Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
           +A+ +F+ MQ  G  PD VT+ T+I    + G LD A+  +  M   G+ P    Y  +I
Sbjct: 278 KAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLI 337

Query: 473 NCLGKAGHLQAAHQLFCEMVNQGCIPNLVTY--NIMIALQAKARNYQSALKLYRDMQNAG 530
                 G L  A +L  EM+N+   P  V Y  +I+  L  + R  +    +   M   G
Sbjct: 338 QGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIINNLCKEGRVAEGK-DIMDMMVQTG 396

Query: 531 FEPDKVTYSIVMEVLGHC--GYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRK 588
             P+ VT++ +ME  G+C  G ++EA A+   M      P+  +YG LVD + K G +  
Sbjct: 397 QRPNVVTFNSLME--GYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDD 454

Query: 589 AWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
           A   +  ML  G++P     + +L    +  + + A  +   M+  G   S+ TY ++L
Sbjct: 455 ALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAAKKMFHEMIESGTTVSIHTYGVVL 513



 Score =  108 bits (271), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 63/220 (28%), Positives = 111/220 (50%), Gaps = 1/220 (0%)

Query: 428 PDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQL 487
           P   TY  LID + +    D+ + +  ++   GL PD F+YS+I   + K G +  AH L
Sbjct: 12  PTIHTYNILIDCYRRVHRPDLGLAIVGRLLKNGLGPDDFSYSLIYGFV-KDGEVDKAHCL 70

Query: 488 FCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGH 547
           F EM+ QG +P ++  N +I    K +    A  + + M ++G  PD  TYS++++ L  
Sbjct: 71  FLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSLIIDGLCK 130

Query: 548 CGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPT 607
              +D+AE V  +M      P+   Y  L+  +  +G   ++   ++ M   G+ P V  
Sbjct: 131 SKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIPTVDN 190

Query: 608 CNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
           CNS + A  + G+ ++A  +   M+  G KP + +Y+ +L
Sbjct: 191 CNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTML 230



 Score =  104 bits (260), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 72/288 (25%), Positives = 141/288 (48%), Gaps = 4/288 (1%)

Query: 363 YTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQ 422
           +++++  L +  +      ++D MV+ G +PNVVT+N L+  Y     + EA  +   M 
Sbjct: 369 FSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMA 428

Query: 423 VVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQ 482
            +G EP+   Y TL+D + K G +D A+ +++ M   G+ P +  YS+I++ L +A    
Sbjct: 429 SIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTT 488

Query: 483 AAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVM 542
           AA ++F EM+  G   ++ TY +++    +      A  L   +     + D +T++IV+
Sbjct: 489 AAKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVI 548

Query: 543 EVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLR 602
             +   G   EA+ +F  +     VP+   Y +++    K  +  +A   + ++ ++G  
Sbjct: 549 SAMFKVGRRQEAKELFDAISTYGLVPNIQTYSMMITNLIKEESYEEADNLFISVEKSGHA 608

Query: 603 PNVPTCNSLLSAFLRVGQLSDA--YHLLQGMLNLGLKPSLQTYTLLLS 648
            +    N ++   L   +++ A  Y  + G  NL L+ S  T +LL S
Sbjct: 609 SDSRLLNHIVRMLLNKAEVAKASNYLSIIGENNLTLEAS--TISLLAS 654



 Score = 89.0 bits (219), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 56/245 (22%), Positives = 120/245 (48%)

Query: 384 DQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKA 443
           + M +D   P V  ++ +I++  +   + E  D+   M   G  P+ VT+ +L++ +   
Sbjct: 355 EMMNKDIPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLV 414

Query: 444 GFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTY 503
           G ++ A  +   M + G+ P+ + Y  +++   K G +  A  +F +M+++G  P  V Y
Sbjct: 415 GNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLY 474

Query: 504 NIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRR 563
           +I++    +AR   +A K++ +M  +G      TY +V+  L      DEA  +  ++  
Sbjct: 475 SIILHGLFQARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFA 534

Query: 564 KNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSD 623
            N   D   + +++    K G  ++A E ++A+   GL PN+ T + +++  ++     +
Sbjct: 535 MNVKFDIITFNIVISAMFKVGRRQEAKELFDAISTYGLVPNIQTYSMMITNLIKEESYEE 594

Query: 624 AYHLL 628
           A +L 
Sbjct: 595 ADNLF 599



 Score = 82.4 bits (202), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 61/255 (23%), Positives = 112/255 (43%)

Query: 382 LLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHA 441
           LLD M   G +PN   Y  L+  Y +   +++AL VF+ M   G +P  V Y  ++    
Sbjct: 423 LLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLF 482

Query: 442 KAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLV 501
           +A     A  M+ +M  +G +    TY V++  L +      A+ L  ++       +++
Sbjct: 483 QARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDII 542

Query: 502 TYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEM 561
           T+NI+I+   K    Q A +L+  +   G  P+  TYS+++  L      +EA+ +F  +
Sbjct: 543 TFNIVISAMFKVGRRQEAKELFDAISTYGLVPNIQTYSMMITNLIKEESYEEADNLFISV 602

Query: 562 RRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQL 621
            +     D  +   +V +      V KA  +   + +  L     T + L S F R G+ 
Sbjct: 603 EKSGHASDSRLLNHIVRMLLNKAEVAKASNYLSIIGENNLTLEASTISLLASLFSREGKY 662

Query: 622 SDAYHLLQGMLNLGL 636
            +   LL   + + +
Sbjct: 663 REHIKLLPANMTMAV 677



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 43/172 (25%), Positives = 79/172 (45%), Gaps = 6/172 (3%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           G K     Y+ ++  L +AR+  A  K+  +M+  G   ++ TY  ++    R N  +EA
Sbjct: 466 GVKPTSVLYSIILHGLFQARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEA 525

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
             + +++  +  + D +T+  +I    K G    A +++  +   GL P+  TYS++I  
Sbjct: 526 NMLLEKLFAMNVKFDIITFNIVISAMFKVGRRQEAKELFDAISTYGLVPNIQTYSMMITN 585

Query: 475 LGKAGHLQAAHQLFCEMVNQG------CIPNLVTYNIMIALQAKARNYQSAL 520
           L K    + A  LF  +   G       + ++V   +  A  AKA NY S +
Sbjct: 586 LIKEESYEEADNLFISVEKSGHASDSRLLNHIVRMLLNKAEVAKASNYLSII 637


>gi|356510082|ref|XP_003523769.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Glycine max]
          Length = 602

 Score =  150 bits (378), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 99/351 (28%), Positives = 163/351 (46%), Gaps = 3/351 (0%)

Query: 314 AEEALGNTNYSMDAYQANQVLKQLQDHTVALGFFNWLRRQAGFK--HDEHTYTTMVGILG 371
           A E L   + + D    N +L+ L D          L RQ   +   D  TYT ++    
Sbjct: 195 ALEVLERMSVAPDVVTYNTILRSLCDSGKLKEAMEVLDRQLQRECYPDVITYTILIEATC 254

Query: 372 RARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRV 431
                G   KLLD+M + GC+P+VVTYN LI+   +   L+EA+     M   GC+P+ +
Sbjct: 255 NDSGVGQAMKLLDEMRKKGCKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCKPNVI 314

Query: 432 TYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEM 491
           T+  ++      G    A  +   M   G SP   T++++IN L +   L  A  +  +M
Sbjct: 315 THNIILRSMCSTGRWMDAERLLSDMLRKGCSPSVVTFNILINFLCRKRLLGRAIDVLEKM 374

Query: 492 VNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYL 551
              GC+PN ++YN ++    + +    A++    M + G  PD VTY+ ++  L   G +
Sbjct: 375 PKHGCVPNSLSYNPLLHGFCQEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKV 434

Query: 552 DEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSL 611
           D A  +  ++  K   P    Y  ++D   K G    A E  E M + GL+P++ T ++L
Sbjct: 435 DAAVEILNQLSSKGCSPVLITYNTVIDGLTKVGKTEYAVELLEEMRRKGLKPDIITYSTL 494

Query: 612 LSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTY-TLLLSCCTEARSPYDMGF 661
           L    R G++ +A  +   M  L +KPS  TY  ++L  C   ++   + F
Sbjct: 495 LRGLGREGKVDEAIKIFHDMEGLSIKPSAVTYNAIMLGLCKAQQTSRAIDF 545



 Score =  146 bits (368), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 91/313 (29%), Positives = 155/313 (49%), Gaps = 4/313 (1%)

Query: 354 AGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNE 413
           +G   D  TY  ++G   ++   G I+K L+ + R    P+VVTYN ++ S   +  L E
Sbjct: 170 SGAVPDVITYNVLIGGYCKS---GEIDKALEVLERMSVAPDVVTYNTILRSLCDSGKLKE 226

Query: 414 ALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIIN 473
           A++V  +     C PD +TY  LI+       +  AM +  +M+  G  PD  TY+V+IN
Sbjct: 227 AMEVLDRQLQRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNVLIN 286

Query: 474 CLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEP 533
            + K G L  A +    M + GC PN++T+NI++        +  A +L  DM   G  P
Sbjct: 287 GICKEGRLDEAIKFLNNMPSYGCKPNVITHNIILRSMCSTGRWMDAERLLSDMLRKGCSP 346

Query: 534 DKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWY 593
             VT++I++  L     L  A  V  +M +   VP+   Y  L+  + +   + +A E+ 
Sbjct: 347 SVVTFNILINFLCRKRLLGRAIDVLEKMPKHGCVPNSLSYNPLLHGFCQEKKMDRAIEYL 406

Query: 594 EAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTE- 652
           E M+  G  P++ T N+LL+A  + G++  A  +L  + + G  P L TY  ++   T+ 
Sbjct: 407 EIMVSRGCYPDIVTYNTLLTALCKDGKVDAAVEILNQLSSKGCSPVLITYNTVIDGLTKV 466

Query: 653 ARSPYDMGFCHEL 665
            ++ Y +    E+
Sbjct: 467 GKTEYAVELLEEM 479



 Score =  135 bits (340), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 89/338 (26%), Positives = 168/338 (49%), Gaps = 6/338 (1%)

Query: 320 NTNYSMDAYQANQVLKQLQDHTVALGFFNWLRRQA--GFKHDEHTYTTMVGILGRARQFG 377
           N + S + + +N  L++L  +        +L R    G   D    T+++    R+ +  
Sbjct: 99  NGSRSFEEFASNIHLRKLVRNGELEEGLKFLERMIYQGDIPDVIACTSLIRGFCRSGKTK 158

Query: 378 AINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLI 437
              ++++ +   G  P+V+TYN LI  Y ++  +++AL+V ++M V    PD VTY T++
Sbjct: 159 KATRIMEILENSGAVPDVITYNVLIGGYCKSGEIDKALEVLERMSVA---PDVVTYNTIL 215

Query: 438 DIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCI 497
                +G L  AM++  +       PD  TY+++I        +  A +L  EM  +GC 
Sbjct: 216 RSLCDSGKLKEAMEVLDRQLQRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCK 275

Query: 498 PNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAV 557
           P++VTYN++I    K      A+K   +M + G +P+ +T++I++  +   G   +AE +
Sbjct: 276 PDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCKPNVITHNIILRSMCSTGRWMDAERL 335

Query: 558 FAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLR 617
            ++M RK   P    + +L++   +   + +A +  E M + G  PN  + N LL  F +
Sbjct: 336 LSDMLRKGCSPSVVTFNILINFLCRKRLLGRAIDVLEKMPKHGCVPNSLSYNPLLHGFCQ 395

Query: 618 VGQLSDAYHLLQGMLNLGLKPSLQTY-TLLLSCCTEAR 654
             ++  A   L+ M++ G  P + TY TLL + C + +
Sbjct: 396 EKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGK 433



 Score =  135 bits (340), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 73/235 (31%), Positives = 125/235 (53%)

Query: 381 KLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIH 440
           +LL  M+R GC P+VVT+N LI+   R   L  A+DV ++M   GC P+ ++Y  L+   
Sbjct: 334 RLLSDMLRKGCSPSVVTFNILINFLCRKRLLGRAIDVLEKMPKHGCVPNSLSYNPLLHGF 393

Query: 441 AKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNL 500
            +   +D A++  + M + G  PD  TY+ ++  L K G + AA ++  ++ ++GC P L
Sbjct: 394 CQEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKVDAAVEILNQLSSKGCSPVL 453

Query: 501 VTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAE 560
           +TYN +I    K    + A++L  +M+  G +PD +TYS ++  LG  G +DEA  +F +
Sbjct: 454 ITYNTVIDGLTKVGKTEYAVELLEEMRRKGLKPDIITYSTLLRGLGREGKVDEAIKIFHD 513

Query: 561 MRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAF 615
           M   +  P    Y  ++    KA    +A ++   M++ G +P   T   L+   
Sbjct: 514 MEGLSIKPSAVTYNAIMLGLCKAQQTSRAIDFLAYMVEKGCKPTEATYTILIEGI 568



 Score =  127 bits (319), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 67/219 (30%), Positives = 117/219 (53%), Gaps = 4/219 (1%)

Query: 362 TYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQM 421
           T+  ++  L R R  G    +L++M + GC PN ++YN L+H + +   ++ A++  + M
Sbjct: 350 TFNILINFLCRKRLLGRAIDVLEKMPKHGCVPNSLSYNPLLHGFCQEKKMDRAIEYLEIM 409

Query: 422 QVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHL 481
              GC PD VTY TL+    K G +D A+++  ++ + G SP   TY+ +I+ L K G  
Sbjct: 410 VSRGCYPDIVTYNTLLTALCKDGKVDAAVEILNQLSSKGCSPVLITYNTVIDGLTKVGKT 469

Query: 482 QAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIV 541
           + A +L  EM  +G  P+++TY+ ++    +      A+K++ DM+    +P  VTY+ +
Sbjct: 470 EYAVELLEEMRRKGLKPDIITYSTLLRGLGREGKVDEAIKIFHDMEGLSIKPSAVTYNAI 529

Query: 542 MEVLGHCGYLDEAEAV--FAEMRRKNWVPDEPVYGLLVD 578
           M  LG C     + A+   A M  K   P E  Y +L++
Sbjct: 530 M--LGLCKAQQTSRAIDFLAYMVEKGCKPTEATYTILIE 566



 Score =  125 bits (314), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 94/368 (25%), Positives = 169/368 (45%), Gaps = 7/368 (1%)

Query: 381 KLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIH 440
           K L++M+  G  P+V+    LI  + R+    +A  + + ++  G  PD +TY  LI  +
Sbjct: 127 KFLERMIYQGDIPDVIACTSLIRGFCRSGKTKKATRIMEILENSGAVPDVITYNVLIGGY 186

Query: 441 AKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNL 500
            K+G +D A+++ ++M  A   PD  TY+ I+  L  +G L+ A ++    + + C P++
Sbjct: 187 CKSGEIDKALEVLERMSVA---PDVVTYNTILRSLCDSGKLKEAMEVLDRQLQRECYPDV 243

Query: 501 VTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAE 560
           +TY I+I           A+KL  +M+  G +PD VTY++++  +   G LDEA      
Sbjct: 244 ITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNVLINGICKEGRLDEAIKFLNN 303

Query: 561 MRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQ 620
           M      P+   + +++      G    A      ML+ G  P+V T N L++   R   
Sbjct: 304 MPSYGCKPNVITHNIILRSMCSTGRWMDAERLLSDMLRKGCSPSVVTFNILINFLCRKRL 363

Query: 621 LSDAYHLLQGMLNLGLKPSLQTYT-LLLSCCTEARSPYDMGFCHELMAVSGHPAHM-FLL 678
           L  A  +L+ M   G  P+  +Y  LL   C E +    + +   +++   +P  + +  
Sbjct: 364 LGRAIDVLEKMPKHGCVPNSLSYNPLLHGFCQEKKMDRAIEYLEIMVSRGCYPDIVTYNT 423

Query: 679 SMPSPGPDGQNVRDHVGSFLEMMHSEDRESKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQ 738
            + +   DG+   D     L  + S+         + V+D L K G  E A  + E   +
Sbjct: 424 LLTALCKDGK--VDAAVEILNQLSSKGCSPVLITYNTVIDGLTKVGKTEYAVELLEEMRR 481

Query: 739 KNVYPDAV 746
           K + PD +
Sbjct: 482 KGLKPDII 489



 Score =  107 bits (267), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 104/415 (25%), Positives = 178/415 (42%), Gaps = 46/415 (11%)

Query: 407 RANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTF 466
           R   L E L   ++M   G  PD +   +LI    ++G    A  + + ++ +G  PD  
Sbjct: 118 RNGELEEGLKFLERMIYQGDIPDVIACTSLIRGFCRSGKTKKATRIMEILENSGAVPDVI 177

Query: 467 TYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALK-LYRD 525
           TY+V+I    K+G +  A ++   M      P++VTYN ++     +   + A++ L R 
Sbjct: 178 TYNVLIGGYCKSGEIDKALEVLERM---SVAPDVVTYNTILRSLCDSGKLKEAMEVLDRQ 234

Query: 526 MQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGN 585
           +Q   + PD +TY+I++E   +   + +A  +  EMR+K   PD   Y +L++   K G 
Sbjct: 235 LQRECY-PDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNVLINGICKEGR 293

Query: 586 VRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTL 645
           + +A ++   M   G +PNV T N +L +    G+  DA  LL  ML  G  PS+ T+ +
Sbjct: 294 LDEAIKFLNNMPSYGCKPNVITHNIILRSMCSTGRWMDAERLLSDMLRKGCSPSVVTFNI 353

Query: 646 LLSCCTEARSPYDMGFCHELMAVSGHPAHMFLLSMPSPGP-----DGQNVRDHVGSFLEM 700
           L++     R          +  +   P H  + +  S  P       +   D    +LE+
Sbjct: 354 LINFLCRKRL-----LGRAIDVLEKMPKHGCVPNSLSYNPLLHGFCQEKKMDRAIEYLEI 408

Query: 701 MHSEDRESKRGLVDAVVDF------LHKSGLKEEAGSVWEVAAQKNVYPDAVKEKGMSYW 754
           M S      RG    +V +      L K G  + A  +           + +  KG S  
Sbjct: 409 MVS------RGCYPDIVTYNTLLTALCKDGKVDAAVEIL----------NQLSSKGCSPV 452

Query: 755 LINLHVMSDGTAVIALSRTLAWFRKQMLISGVGPSRIDIVT------GWGRRSRV 803
           LI  + + DG   +  +       ++M   G+ P   DI+T      G GR  +V
Sbjct: 453 LITYNTVIDGLTKVGKTEYAVELLEEMRRKGLKP---DIITYSTLLRGLGREGKV 504



 Score = 85.5 bits (210), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 46/153 (30%), Positives = 78/153 (50%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           G   D  TY T++  L +  +  A  ++L+Q+   GC P ++TYN +I    +      A
Sbjct: 413 GCYPDIVTYNTLLTALCKDGKVDAAVEILNQLSSKGCSPVLITYNTVIDGLTKVGKTEYA 472

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
           +++ ++M+  G +PD +TY TL+    + G +D A+ ++  M+   + P   TY+ I+  
Sbjct: 473 VELLEEMRRKGLKPDIITYSTLLRGLGREGKVDEAIKIFHDMEGLSIKPSAVTYNAIMLG 532

Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMI 507
           L KA     A      MV +GC P   TY I+I
Sbjct: 533 LCKAQQTSRAIDFLAYMVEKGCKPTEATYTILI 565



 Score = 73.6 bits (179), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 58/230 (25%), Positives = 108/230 (46%), Gaps = 12/230 (5%)

Query: 462 SPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALK 521
           S + F  ++ +  L + G L+   +    M+ QG IP+++    +I    ++   + A +
Sbjct: 103 SFEEFASNIHLRKLVRNGELEEGLKFLERMIYQGDIPDVIACTSLIRGFCRSGKTKKATR 162

Query: 522 LYRDMQNAGFEPDKVTYSIVMEVLGHC--GYLDEAEAVFAEMRRKNWVPDEPVYGLLVDL 579
           +   ++N+G  PD +TY++++   G+C  G +D+A  V   + R +  PD   Y  ++  
Sbjct: 163 IMEILENSGAVPDVITYNVLIG--GYCKSGEIDKALEV---LERMSVAPDVVTYNTILRS 217

Query: 580 WGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPS 639
              +G +++A E  +  LQ    P+V T   L+ A      +  A  LL  M   G KP 
Sbjct: 218 LCDSGKLKEAMEVLDRQLQRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPD 277

Query: 640 LQTYTLLLS-CCTEARSPYDMGFCHELMAVSGHPA----HMFLLSMPSPG 684
           + TY +L++  C E R    + F + + +    P     ++ L SM S G
Sbjct: 278 VVTYNVLINGICKEGRLDEAIKFLNNMPSYGCKPNVITHNIILRSMCSTG 327



 Score = 50.8 bits (120), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 30/96 (31%), Positives = 47/96 (48%), Gaps = 1/96 (1%)

Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLI 402
           A+     +RR+ G K D  TY+T++  LGR  +     K+   M     +P+ VTYN ++
Sbjct: 472 AVELLEEMRRK-GLKPDIITYSTLLRGLGREGKVDEAIKIFHDMEGLSIKPSAVTYNAIM 530

Query: 403 HSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLID 438
               +A   + A+D    M   GC+P   TY  LI+
Sbjct: 531 LGLCKAQQTSRAIDFLAYMVEKGCKPTEATYTILIE 566


>gi|326488077|dbj|BAJ89877.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 395

 Score =  150 bits (378), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 95/357 (26%), Positives = 177/357 (49%), Gaps = 2/357 (0%)

Query: 316 EALGNTNYSMDAYQANQVLKQLQDHTVALGFFNWLRR--QAGFKHDEHTYTTMVGILGRA 373
           E + ++   +D    + +++ L  H  AL     +++    G      +Y  ++  L   
Sbjct: 23  ENIASSGLLLDDLFLSPIIRHLCKHKEALAAHELVKKFENLGVSLKTGSYNALICGLVDE 82

Query: 374 RQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTY 433
                  +L  +M R GC P+  TY+ ++ + G++  + + L + ++M   G +   VTY
Sbjct: 83  DLIDIAEELFSEMKRLGCDPDEFTYHLILDAMGKSMRIEDMLKIQEEMHNKGYKSTYVTY 142

Query: 434 CTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVN 493
            T+I    K+  LD A+++Y ++ + G SP   TY  +++ L K G+++ A  LF EM+ 
Sbjct: 143 NTIISGLVKSKMLDEAINLYYQLMSEGFSPTPCTYGPLLDGLLKDGNIEDAEALFDEMLE 202

Query: 494 QGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDE 553
            GC PN   YNI++     A + +   +L+  M   G  PD  +Y++V++ L   G L++
Sbjct: 203 CGCEPNCAIYNILLNGYRIAGDTEKVCELFESMVEQGMNPDIKSYTVVIDTLCADGRLND 262

Query: 554 AEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLS 613
             + F ++      PD   Y LL+   GK+G + +A   Y  M + G+ PN+ T NSL+ 
Sbjct: 263 GLSYFKQLTDMGLEPDLITYNLLIHGLGKSGRLEEALSLYNDMEKKGIAPNLYTYNSLIL 322

Query: 614 AFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGFCHELMAVSG 670
              + G+ ++A  + + +L  G KP++ TY  L+   + + SP +    +  M V G
Sbjct: 323 YLGKAGKAAEAGKMYEELLAKGWKPNVFTYNALIRGYSVSGSPENAFAAYGRMIVGG 379



 Score =  149 bits (377), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 102/371 (27%), Positives = 185/371 (49%), Gaps = 12/371 (3%)

Query: 287 FSRHFASTGNVVESV--SRILRQW---KWGPLAEEALG---NTNYSMDAYQANQVLKQLQ 338
           F+ + AS+G +++ +  S I+R     K    A E +    N   S+     N ++  L 
Sbjct: 21  FAENIASSGLLLDDLFLSPIIRHLCKHKEALAAHELVKKFENLGVSLKTGSYNALICGLV 80

Query: 339 DHT---VALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNV 395
           D     +A   F+ ++R  G   DE TY  ++  +G++ +   + K+ ++M   G +   
Sbjct: 81  DEDLIDIAEELFSEMKR-LGCDPDEFTYHLILDAMGKSMRIEDMLKIQEEMHNKGYKSTY 139

Query: 396 VTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKK 455
           VTYN +I    ++  L+EA++++ Q+   G  P   TY  L+D   K G ++ A  ++ +
Sbjct: 140 VTYNTIISGLVKSKMLDEAINLYYQLMSEGFSPTPCTYGPLLDGLLKDGNIEDAEALFDE 199

Query: 456 MQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARN 515
           M   G  P+   Y++++N    AG  +   +LF  MV QG  P++ +Y ++I        
Sbjct: 200 MLECGCEPNCAIYNILLNGYRIAGDTEKVCELFESMVEQGMNPDIKSYTVVIDTLCADGR 259

Query: 516 YQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGL 575
               L  ++ + + G EPD +TY++++  LG  G L+EA +++ +M +K   P+   Y  
Sbjct: 260 LNDGLSYFKQLTDMGLEPDLITYNLLIHGLGKSGRLEEALSLYNDMEKKGIAPNLYTYNS 319

Query: 576 LVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLG 635
           L+   GKAG   +A + YE +L  G +PNV T N+L+  +   G   +A+     M+  G
Sbjct: 320 LILYLGKAGKAAEAGKMYEELLAKGWKPNVFTYNALIRGYSVSGSPENAFAAYGRMIVGG 379

Query: 636 LKPSLQTYTLL 646
            +P+  TY  L
Sbjct: 380 CRPNSSTYMQL 390



 Score =  117 bits (294), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 82/338 (24%), Positives = 159/338 (47%), Gaps = 47/338 (13%)

Query: 414 ALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIIN 473
           A ++ K+ + +G      +Y  LI        +D+A +++ +M+  G  PD FTY +I++
Sbjct: 53  AHELVKKFENLGVSLKTGSYNALICGLVDEDLIDIAEELFSEMKRLGCDPDEFTYHLILD 112

Query: 474 CLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEP 533
            +GK+  ++   ++  EM N+G     VTYN +I+   K++    A+ LY  + + GF P
Sbjct: 113 AMGKSMRIEDMLKIQEEMHNKGYKSTYVTYNTIISGLVKSKMLDEAINLYYQLMSEGFSP 172

Query: 534 DKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWY 593
              TY  +++ L   G +++AEA+F EM      P+  +Y +L++ +  AG+  K  E +
Sbjct: 173 TPCTYGPLLDGLLKDGNIEDAEALFDEMLECGCEPNCAIYNILLNGYRIAGDTEKVCELF 232

Query: 594 EAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEA 653
           E+M++ G+ P++ +   ++      G+L+D     + + ++GL+P L TY LL+      
Sbjct: 233 ESMVEQGMNPDIKSYTVVIDTLCADGRLNDGLSYFKQLTDMGLEPDLITYNLLI------ 286

Query: 654 RSPYDMGFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRESKRGLV 713
                    H L                     G++     G   E +   +   K+G+ 
Sbjct: 287 ---------HGL---------------------GKS-----GRLEEALSLYNDMEKKGIA 311

Query: 714 ------DAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDA 745
                 ++++ +L K+G   EAG ++E    K   P+ 
Sbjct: 312 PNLYTYNSLILYLGKAGKAAEAGKMYEELLAKGWKPNV 349


>gi|15221549|ref|NP_176454.1| RNA processing factor 2 [Arabidopsis thaliana]
 gi|193806496|sp|Q9SXD1.2|PPR91_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g62670, mitochondrial; Flags: Precursor
 gi|332195871|gb|AEE33992.1| RNA processing factor 2 [Arabidopsis thaliana]
          Length = 630

 Score =  150 bits (378), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 107/393 (27%), Positives = 190/393 (48%), Gaps = 8/393 (2%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           G  H+ +TY+ ++    R  Q      +L +M++ G +PN+VT + L++ Y  +  ++EA
Sbjct: 111 GIPHNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEA 170

Query: 415 LDVFKQMQVVGCEPDRVTYCTLID---IHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
           + +  QM V G +P+ VT+ TLI    +H KA     AM +  +M A G  PD  TY V+
Sbjct: 171 VALVDQMFVTGYQPNTVTFNTLIHGLFLHNKAS---EAMALIDRMVAKGCQPDLVTYGVV 227

Query: 472 INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF 531
           +N L K G    A  L  +M      P ++ YN +I    K ++   AL L+++M+  G 
Sbjct: 228 VNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGI 287

Query: 532 EPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWE 591
            P+ VTYS ++  L + G   +A  + ++M  +   PD   +  L+D + K G + +A +
Sbjct: 288 RPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEK 347

Query: 592 WYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTY-TLLLSCC 650
            Y+ M++  + P++ T +SL++ F    +L +A  + + M++    P + TY TL+   C
Sbjct: 348 LYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFC 407

Query: 651 TEARSPYDMGFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRESKR 710
              R    M    E M+  G   +    ++   G       D      + M S+      
Sbjct: 408 KYKRVEEGMEVFRE-MSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNI 466

Query: 711 GLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYP 743
              + ++D L K+G  E+A  V+E   +  + P
Sbjct: 467 MTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEP 499



 Score =  146 bits (369), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 104/402 (25%), Positives = 185/402 (46%), Gaps = 6/402 (1%)

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
           + G++ +  T ++++     +++      L+DQM   G QPN VT+N LIH     N  +
Sbjct: 144 KLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKAS 203

Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
           EA+ +  +M   GC+PD VTY  +++   K G  D+A ++  KM+   L P    Y+ II
Sbjct: 204 EAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTII 263

Query: 473 NCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFE 532
           + L K  H+  A  LF EM  +G  PN+VTY+ +I+       +  A +L  DM      
Sbjct: 264 DGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKIN 323

Query: 533 PDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEW 592
           PD  T+S +++     G L EAE ++ EM +++  P    Y  L++ +     + +A + 
Sbjct: 324 PDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQM 383

Query: 593 YEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTE 652
           +E M+     P+V T N+L+  F +  ++ +   + + M   GL  +  TY +L+    +
Sbjct: 384 FEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQ 443

Query: 653 ARSPYDMGFCHEL---MAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRESK 709
           A    D     E+   M   G P ++   +    G       +      E +     E  
Sbjct: 444 AG---DCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPT 500

Query: 710 RGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAVKEKGM 751
               + +++ + K+G  E+   ++   + K V PD V    M
Sbjct: 501 IYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTM 542



 Score =  139 bits (351), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 83/296 (28%), Positives = 152/296 (51%)

Query: 359 DEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVF 418
           D  T++ ++    +  +     KL D+MV+    P++VTY+ LI+ +   + L+EA  +F
Sbjct: 325 DVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMF 384

Query: 419 KQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKA 478
           + M    C PD VTY TLI    K   ++  M+++++M   GL  +T TY+++I  L +A
Sbjct: 385 EFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQA 444

Query: 479 GHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTY 538
           G    A ++F EMV+ G  PN++TYN ++    K    + A+ ++  +Q +  EP   TY
Sbjct: 445 GDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTY 504

Query: 539 SIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQ 598
           +I++E +   G +++   +F  +  K   PD   Y  ++  + + G+  +A   ++ M +
Sbjct: 505 NIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKE 564

Query: 599 AGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEAR 654
            G  PN    N+L+ A LR G    +  L++ M + G      T  L+ +   + R
Sbjct: 565 DGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTNMLHDGR 620



 Score =  138 bits (348), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 92/323 (28%), Positives = 151/323 (46%), Gaps = 19/323 (5%)

Query: 347 FNWLRR--QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIH- 403
           FN L +  Q   +     Y T++  L + +       L  +M   G +PNVVTY+ LI  
Sbjct: 241 FNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISC 300

Query: 404 --SYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGL 461
             +YGR    ++A  +   M      PD  T+  LID   K G L  A  +Y +M    +
Sbjct: 301 LCNYGR---WSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSI 357

Query: 462 SPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALK 521
            P   TYS +IN       L  A Q+F  MV++ C P++VTYN +I    K +  +  ++
Sbjct: 358 DPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGME 417

Query: 522 LYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWG 581
           ++R+M   G   + VTY+I+++ L   G  D A+ +F EM      P+   Y  L+D   
Sbjct: 418 VFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLC 477

Query: 582 KAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQ 641
           K G + KA   +E + ++ + P + T N ++    + G++ D + L   +   G+KP + 
Sbjct: 478 KNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVV 537

Query: 642 TYTLLLSCCTEARSPYDMGFCHE 664
            Y  ++S           GFC +
Sbjct: 538 AYNTMIS-----------GFCRK 549



 Score =  135 bits (340), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 83/305 (27%), Positives = 155/305 (50%), Gaps = 1/305 (0%)

Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLI 402
           AL  F  +  + G + +  TY++++  L    ++   ++LL  M+     P+V T++ LI
Sbjct: 275 ALNLFKEMETK-GIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALI 333

Query: 403 HSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLS 462
            ++ +   L EA  ++ +M     +P  VTY +LI+       LD A  M++ M +    
Sbjct: 334 DAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCF 393

Query: 463 PDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKL 522
           PD  TY+ +I    K   ++   ++F EM  +G + N VTYNI+I    +A +   A ++
Sbjct: 394 PDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEI 453

Query: 523 YRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGK 582
           +++M + G  P+ +TY+ +++ L   G L++A  VF  ++R    P    Y ++++   K
Sbjct: 454 FKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCK 513

Query: 583 AGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQT 642
           AG V   W+ +  +   G++P+V   N+++S F R G   +A  L + M   G  P+   
Sbjct: 514 AGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGC 573

Query: 643 YTLLL 647
           Y  L+
Sbjct: 574 YNTLI 578



 Score =  122 bits (305), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 99/396 (25%), Positives = 179/396 (45%), Gaps = 24/396 (6%)

Query: 363 YTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQ 422
           ++ ++  + +  +F  +  L +QM   G   N  TY+ LI+ + R + L  AL V  +M 
Sbjct: 84  FSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILINCFCRRSQLPLALAVLGKMM 143

Query: 423 VVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQ 482
            +G EP+ VT  +L++ +  +  +  A+ +  +M   G  P+T T++ +I+ L       
Sbjct: 144 KLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKAS 203

Query: 483 AAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVM 542
            A  L   MV +GC P+LVTY +++    K  +   A  L   M+    EP  + Y+ ++
Sbjct: 204 EAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTII 263

Query: 543 EVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLR 602
           + L    ++D+A  +F EM  K   P+   Y  L+      G    A      M++  + 
Sbjct: 264 DGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKIN 323

Query: 603 PNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGFC 662
           P+V T ++L+ AF++ G+L +A  L   M+   + PS+ TY+ L++           GFC
Sbjct: 324 PDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLIN-----------GFC 372

Query: 663 HELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSED-----RE-SKRGLVDAV 716
                        F++S     PD       +  F +    E+     RE S+RGLV   
Sbjct: 373 MHDRLDEAKQMFEFMVS-KHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNT 431

Query: 717 VDF------LHKSGLKEEAGSVWEVAAQKNVYPDAV 746
           V +      L ++G  + A  +++      V P+ +
Sbjct: 432 VTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIM 467



 Score =  111 bits (278), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 77/283 (27%), Positives = 131/283 (46%), Gaps = 6/283 (2%)

Query: 382 LLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHA 441
           L  +MV+    P+++ +++L+ +  + N  +  + + +QMQ +G   +  TY  LI+   
Sbjct: 68  LFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILINCFC 127

Query: 442 KAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLV 501
           +   L +A+ +  KM   G  P+  T S ++N    +  +  A  L  +M   G  PN V
Sbjct: 128 RRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTV 187

Query: 502 TYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEM 561
           T+N +I           A+ L   M   G +PD VTY +V+  L   G  D A  +  +M
Sbjct: 188 TFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKM 247

Query: 562 RRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQL 621
            +    P   +Y  ++D   K  ++  A   ++ M   G+RPNV T +SL+S     G+ 
Sbjct: 248 EQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRW 307

Query: 622 SDAYHLLQGMLNLGLKPSLQTYTLLLSC------CTEARSPYD 658
           SDA  LL  M+   + P + T++ L+          EA   YD
Sbjct: 308 SDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYD 350



 Score =  107 bits (268), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 67/245 (27%), Positives = 121/245 (49%), Gaps = 1/245 (0%)

Query: 411 LNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSV 470
           L++A+ +F +M      P  + +  L+   AK    DV + + ++MQ  G+  + +TYS+
Sbjct: 62  LDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSI 121

Query: 471 IINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAG 530
           +INC  +   L  A  +  +M+  G  PN+VT + ++     ++    A+ L   M   G
Sbjct: 122 LINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTG 181

Query: 531 FEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAW 590
           ++P+ VT++ ++  L       EA A+   M  K   PD   YG++V+   K G+   A+
Sbjct: 182 YQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAF 241

Query: 591 EWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSC- 649
                M Q  L P V   N+++    +   + DA +L + M   G++P++ TY+ L+SC 
Sbjct: 242 NLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCL 301

Query: 650 CTEAR 654
           C   R
Sbjct: 302 CNYGR 306



 Score = 99.8 bits (247), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 59/202 (29%), Positives = 104/202 (51%), Gaps = 1/202 (0%)

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
           Q G   +  TY  ++  L +A       ++  +MV DG  PN++TYN L+    +   L 
Sbjct: 424 QRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLE 483

Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
           +A+ VF+ +Q    EP   TY  +I+   KAG ++   D++  +   G+ PD   Y+ +I
Sbjct: 484 KAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMI 543

Query: 473 NCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFE 532
           +   + G  + A  LF EM   G +PN   YN +I  + +  + +++ +L ++M++ GF 
Sbjct: 544 SGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFA 603

Query: 533 PDKVTYSIVMEVLGHCGYLDEA 554
            D  T  +V  +L H G LD++
Sbjct: 604 GDASTIGLVTNML-HDGRLDKS 624


>gi|259490098|ref|NP_001159276.1| uncharacterized protein LOC100304366 [Zea mays]
 gi|223943161|gb|ACN25664.1| unknown [Zea mays]
 gi|414590092|tpg|DAA40663.1| TPA: hypothetical protein ZEAMMB73_658820 [Zea mays]
 gi|414590093|tpg|DAA40664.1| TPA: hypothetical protein ZEAMMB73_658820 [Zea mays]
          Length = 535

 Score =  150 bits (378), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 89/267 (33%), Positives = 140/267 (52%), Gaps = 4/267 (1%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           +Q+G   + +TYT ++  + RA Q     +LL QM+  GC PN  T+N ++ S+ +A   
Sbjct: 267 QQSGIMPNVYTYTAVIDAMYRAGQVPRAQELLCQMIDSGCPPNTTTFNAIMRSHVKAGRS 326

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGF--LDVAMDMYKKMQAAGLSPDTFTYS 469
            + L V  QMQ + CEPD +TY  LI+ H   G   LD A+ +  KM A    PD  T++
Sbjct: 327 EQVLQVHNQMQQLRCEPDVITYNFLIETHCGKGQGNLDAALKVLDKMTAKKCVPDCHTFN 386

Query: 470 VIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNA 529
            +   L   G++ AAH+L+ +M    C PN+VTYN ++ L  K ++    L++ +DM   
Sbjct: 387 PMFRLLLVLGNIGAAHKLYEKMRELQCKPNVVTYNCLLRLFNKEKSMDMVLRMKKDMDAE 446

Query: 530 GFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEM-RRKNWVPDEPVYGLLVDLWGKAGNVRK 588
           G EP+  TY+ ++E     G    A     EM   K++ P + V  +++ L  KAG ++K
Sbjct: 447 GIEPNMHTYAALIEAFCGRGNWKRAHTTLKEMIEEKSFKPSKQVRDMVLVLLRKAGQLKK 506

Query: 589 AWEWYEAMLQAGLRPNVPTCNSLLSAF 615
             E  E M+  G     P  ++L SA 
Sbjct: 507 HEELVELMVDRGFISQPPN-DALWSAL 532



 Score =  149 bits (375), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 95/344 (27%), Positives = 156/344 (45%), Gaps = 41/344 (11%)

Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLI 402
           A+ FF+ +            Y +M+ +L + R FG    LLD+M       +      L 
Sbjct: 118 AVAFFHHVSPSLPADSLPDLYASMIVLLAKHRHFGLARHLLDEMRERAVPISRQLILALT 177

Query: 403 HSYGRANYLNEALDVFKQMQVVGC-----------------------------------E 427
             Y RA   +EA D+F++M+  G                                     
Sbjct: 178 RRYVRAEMPSEAADLFRRMEEYGAGAPDPATLASLLAALSKKRLASEAQALFDSCRTVFT 237

Query: 428 PDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQL 487
           PD V Y  ++    +AG LD A  ++ +MQ +G+ P+ +TY+ +I+ + +AG +  A +L
Sbjct: 238 PDVVLYTAVVHAWCRAGRLDEAERVFTEMQQSGIMPNVYTYTAVIDAMYRAGQVPRAQEL 297

Query: 488 FCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGH 547
            C+M++ GC PN  T+N ++    KA   +  L+++  MQ    EPD +TY+ ++E   H
Sbjct: 298 LCQMIDSGCPPNTTTFNAIMRSHVKAGRSEQVLQVHNQMQQLRCEPDVITYNFLIET--H 355

Query: 548 CGY----LDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRP 603
           CG     LD A  V  +M  K  VPD   +  +  L    GN+  A + YE M +   +P
Sbjct: 356 CGKGQGNLDAALKVLDKMTAKKCVPDCHTFNPMFRLLLVLGNIGAAHKLYEKMRELQCKP 415

Query: 604 NVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
           NV T N LL  F +   +     + + M   G++P++ TY  L+
Sbjct: 416 NVVTYNCLLRLFNKEKSMDMVLRMKKDMDAEGIEPNMHTYAALI 459


>gi|255660846|gb|ACU25592.1| pentatricopeptide repeat-containing protein [Tamonea boxiana]
          Length = 418

 Score =  150 bits (378), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 86/279 (30%), Positives = 152/279 (54%)

Query: 370 LGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPD 429
           L + + F  +     +++  G   ++  +N L+H + +   +  A  VF  +   G  P 
Sbjct: 111 LMKLKYFKLVWGFYKEILECGYPASLYFFNILMHRFCKEGEIWIAQSVFDSITKWGLRPS 170

Query: 430 RVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFC 489
            V++ TL++ + + G LD    +   M A+G+ PD +TYSV+IN L K   +  A+ LF 
Sbjct: 171 VVSFNTLMNGYIRLGDLDQGFKLKNAMHASGVQPDVYTYSVLINGLCKESKMNEANDLFN 230

Query: 490 EMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCG 549
           EM+++G +PN VT+  +I    K     SA++ Y+ M +  F PD +TY+ ++  L   G
Sbjct: 231 EMLDKGLVPNGVTFTTLIDGHCKNGKVDSAMETYKQMLSQCFLPDLITYNTLIYGLCKKG 290

Query: 550 YLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCN 609
            L +A+ +  EMR K   PD+  Y  L+D   K G++  A+E  E M++  +R +     
Sbjct: 291 DLKQAQDLLDEMRMKGLKPDKITYTTLIDGNCKEGDLDSAFELRETMVKESIRLDDVAYT 350

Query: 610 SLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
           +L+S   + G+ +DA  +L+ ML++GLKP   TYT++++
Sbjct: 351 ALISGLCQEGRATDAEKMLREMLSVGLKPDNGTYTMIIN 389



 Score =  123 bits (309), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 77/227 (33%), Positives = 116/227 (51%)

Query: 381 KLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIH 440
           KL + M   G QP+V TY+ LI+   + + +NEA D+F +M   G  P+ VT+ TLID H
Sbjct: 192 KLKNAMHASGVQPDVYTYSVLINGLCKESKMNEANDLFNEMLDKGLVPNGVTFTTLIDGH 251

Query: 441 AKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNL 500
            K G +D AM+ YK+M +    PD  TY+ +I  L K G L+ A  L  EM  +G  P+ 
Sbjct: 252 CKNGKVDSAMETYKQMLSQCFLPDLITYNTLIYGLCKKGDLKQAQDLLDEMRMKGLKPDK 311

Query: 501 VTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAE 560
           +TY  +I    K  +  SA +L   M       D V Y+ ++  L   G   +AE +  E
Sbjct: 312 ITYTTLIDGNCKEGDLDSAFELRETMVKESIRLDDVAYTALISGLCQEGRATDAEKMLRE 371

Query: 561 MRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPT 607
           M      PD   Y ++++ + K  +V+ A +  + M + G  P V T
Sbjct: 372 MLSVGLKPDNGTYTMIINEFCKKEDVKTAAKLLKEMQRQGHVPCVVT 418



 Score = 91.7 bits (226), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 64/279 (22%), Positives = 127/279 (45%), Gaps = 5/279 (1%)

Query: 397 TYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKM 456
           T  +++    +  Y       +K++   G       +  L+    K G + +A  ++  +
Sbjct: 103 TCRKVLEHLMKLKYFKLVWGFYKEILECGYPASLYFFNILMHRFCKEGEIWIAQSVFDSI 162

Query: 457 QAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNY 516
              GL P   +++ ++N   + G L    +L   M   G  P++ TY+++I    K    
Sbjct: 163 TKWGLRPSVVSFNTLMNGYIRLGDLDQGFKLKNAMHASGVQPDVYTYSVLINGLCKESKM 222

Query: 517 QSALKLYRDMQNAGFEPDKVTYSIVMEVLGHC--GYLDEAEAVFAEMRRKNWVPDEPVYG 574
             A  L+ +M + G  P+ VT++ +++  GHC  G +D A   + +M  + ++PD   Y 
Sbjct: 223 NEANDLFNEMLDKGLVPNGVTFTTLID--GHCKNGKVDSAMETYKQMLSQCFLPDLITYN 280

Query: 575 LLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNL 634
            L+    K G++++A +  + M   GL+P+  T  +L+    + G L  A+ L + M+  
Sbjct: 281 TLIYGLCKKGDLKQAQDLLDEMRMKGLKPDKITYTTLIDGNCKEGDLDSAFELRETMVKE 340

Query: 635 GLKPSLQTYTLLLS-CCTEARSPYDMGFCHELMAVSGHP 672
            ++     YT L+S  C E R+        E+++V   P
Sbjct: 341 SIRLDDVAYTALISGLCQEGRATDAEKMLREMLSVGLKP 379



 Score = 64.3 bits (155), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 63/300 (21%), Positives = 119/300 (39%), Gaps = 20/300 (6%)

Query: 356 FKHDEHTYTTMVGILGRARQFGAINKLLDQMV-RDGCQPNVVTYNRLIHSYGRANYLNEA 414
           F+H  HTY TM+  L   +       L+  +V R G       +  ++ + G        
Sbjct: 9   FRHTLHTYCTMIHFLCTHQMLLEAKSLIQIVVSRKGKDSASAVFAAILETKGTQ------ 62

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
                         D   +  LI+ + ++GF+  A++ ++  +   L     T   ++  
Sbjct: 63  ------------RSDIYVFSGLINAYLESGFVRDAIECFRLTREHKLRVPFDTCRKVLEH 110

Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPD 534
           L K  + +     + E++  G   +L  +NI++    K      A  ++  +   G  P 
Sbjct: 111 LMKLKYFKLVWGFYKEILECGYPASLYFFNILMHRFCKEGEIWIAQSVFDSITKWGLRPS 170

Query: 535 KVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYE 594
            V+++ +M      G LD+   +   M      PD   Y +L++   K   + +A + + 
Sbjct: 171 VVSFNTLMNGYIRLGDLDQGFKLKNAMHASGVQPDVYTYSVLINGLCKESKMNEANDLFN 230

Query: 595 AMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTY-TLLLSCCTEA 653
            ML  GL PN  T  +L+    + G++  A    + ML+    P L TY TL+   C + 
Sbjct: 231 EMLDKGLVPNGVTFTTLIDGHCKNGKVDSAMETYKQMLSQCFLPDLITYNTLIYGLCKKG 290


>gi|413933767|gb|AFW68318.1| hypothetical protein ZEAMMB73_786057 [Zea mays]
          Length = 645

 Score =  150 bits (378), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 88/306 (28%), Positives = 152/306 (49%), Gaps = 1/306 (0%)

Query: 342 VALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRL 401
           VA G  N +    G   +   Y T++  L  A ++     LL +M    C  + VT+N L
Sbjct: 305 VARGILNRMPSY-GLSPNVVCYNTLLKGLCSADRWEEAEGLLAEMFDKDCPLDDVTFNIL 363

Query: 402 IHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGL 461
           +    +   ++  ++V +QM   GC PD +TY T+I+   K G +D A+ + + M A G 
Sbjct: 364 VDFLCQNGLVDRVIEVLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLRSMAACGC 423

Query: 462 SPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALK 521
            P+T +Y++++  L  A     A +L  +M+ QGC PN VT+N +I    K    + A++
Sbjct: 424 RPNTVSYTIVLKGLCSAERWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIE 483

Query: 522 LYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWG 581
           L + M   G  PD ++YS V++ LG  G  DEA  +   M +K   P+  +Y  +     
Sbjct: 484 LLKQMLVNGCSPDLISYSTVIDGLGKAGNTDEALELLNVMVKKGMSPNTIIYSSIASALS 543

Query: 582 KAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQ 641
             G + K  + +E +    +R +    N+++S+  + G+   A   L  M++ G  P+  
Sbjct: 544 GEGRINKVIQMFENIQDTTVRSDAVLYNAVISSLCKRGETDRAIEFLAYMVSSGCVPNES 603

Query: 642 TYTLLL 647
           TYT+L+
Sbjct: 604 TYTILI 609



 Score =  142 bits (357), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 108/409 (26%), Positives = 180/409 (44%), Gaps = 3/409 (0%)

Query: 324 SMDAYQANQVLKQLQDH---TVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAIN 380
           ++D    N VL+ + D      A+     L    G + D  +Y  ++  L  AR++G + 
Sbjct: 178 ALDVGNCNLVLQAVCDQGPVDEAVRLLRDLLPSFGCEPDVVSYNAVLRGLCMARRWGHVQ 237

Query: 381 KLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIH 440
            L+++MV  GC PN+VT++ LI    R        +V  QM   GC PD   Y T+ID  
Sbjct: 238 DLMEEMVAAGCPPNIVTFSTLIGHLCRNGLFERVHEVHAQMAEHGCAPDVRMYATIIDGV 297

Query: 441 AKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNL 500
            K   L+VA  +  +M + GLSP+   Y+ ++  L  A   + A  L  EM ++ C  + 
Sbjct: 298 CKEERLEVARGILNRMPSYGLSPNVVCYNTLLKGLCSADRWEEAEGLLAEMFDKDCPLDD 357

Query: 501 VTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAE 560
           VT+NI++    +       +++   M   G  PD +TY+ V+      G +DEA  +   
Sbjct: 358 VTFNILVDFLCQNGLVDRVIEVLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLRS 417

Query: 561 MRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQ 620
           M      P+   Y +++     A     A E    M+Q G  PN  T N+L++   + G 
Sbjct: 418 MAACGCRPNTVSYTIVLKGLCSAERWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGL 477

Query: 621 LSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGFCHELMAVSGHPAHMFLLSM 680
           +  A  LL+ ML  G  P L +Y+ ++    +A +  +      +M   G   +  + S 
Sbjct: 478 VEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGNTDEALELLNVMVKKGMSPNTIIYSS 537

Query: 681 PSPGPDGQNVRDHVGSFLEMMHSEDRESKRGLVDAVVDFLHKSGLKEEA 729
            +    G+   + V    E +      S   L +AV+  L K G  + A
Sbjct: 538 IASALSGEGRINKVIQMFENIQDTTVRSDAVLYNAVISSLCKRGETDRA 586



 Score =  125 bits (314), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 97/377 (25%), Positives = 170/377 (45%), Gaps = 3/377 (0%)

Query: 372 RARQF-GAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQM-QVVGCEPD 429
           RA  F GA+  L D   R GC  +V   N ++ +      ++EA+ + + +    GCEPD
Sbjct: 158 RASGFRGAVGVLRDLHGR-GCALDVGNCNLVLQAVCDQGPVDEAVRLLRDLLPSFGCEPD 216

Query: 430 RVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFC 489
            V+Y  ++     A       D+ ++M AAG  P+  T+S +I  L + G  +  H++  
Sbjct: 217 VVSYNAVLRGLCMARRWGHVQDLMEEMVAAGCPPNIVTFSTLIGHLCRNGLFERVHEVHA 276

Query: 490 EMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCG 549
           +M   GC P++  Y  +I    K    + A  +   M + G  P+ V Y+ +++ L    
Sbjct: 277 QMAEHGCAPDVRMYATIIDGVCKEERLEVARGILNRMPSYGLSPNVVCYNTLLKGLCSAD 336

Query: 550 YLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCN 609
             +EAE + AEM  K+   D+  + +LVD   + G V +  E  E ML+ G  P+V T  
Sbjct: 337 RWEEAEGLLAEMFDKDCPLDDVTFNILVDFLCQNGLVDRVIEVLEQMLEHGCMPDVITYT 396

Query: 610 SLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGFCHELMAVS 669
           ++++ F + G + +A  LL+ M   G +P+  +YT++L     A    D       M   
Sbjct: 397 TVINGFCKEGLIDEAVMLLRSMAACGCRPNTVSYTIVLKGLCSAERWVDAEELMSQMIQQ 456

Query: 670 GHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRESKRGLVDAVVDFLHKSGLKEEA 729
           G P +    +        + + +     L+ M              V+D L K+G  +EA
Sbjct: 457 GCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGNTDEA 516

Query: 730 GSVWEVAAQKNVYPDAV 746
             +  V  +K + P+ +
Sbjct: 517 LELLNVMVKKGMSPNTI 533



 Score =  125 bits (313), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 72/277 (25%), Positives = 136/277 (49%)

Query: 359 DEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVF 418
           D+ T+  +V  L +      + ++L+QM+  GC P+V+TY  +I+ + +   ++EA+ + 
Sbjct: 356 DDVTFNILVDFLCQNGLVDRVIEVLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLL 415

Query: 419 KQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKA 478
           + M   GC P+ V+Y  ++     A     A ++  +M   G  P+  T++ +IN L K 
Sbjct: 416 RSMAACGCRPNTVSYTIVLKGLCSAERWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKK 475

Query: 479 GHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTY 538
           G ++ A +L  +M+  GC P+L++Y+ +I    KA N   AL+L   M   G  P+ + Y
Sbjct: 476 GLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGNTDEALELLNVMVKKGMSPNTIIY 535

Query: 539 SIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQ 598
           S +   L   G +++   +F  ++      D  +Y  ++    K G   +A E+   M+ 
Sbjct: 536 SSIASALSGEGRINKVIQMFENIQDTTVRSDAVLYNAVISSLCKRGETDRAIEFLAYMVS 595

Query: 599 AGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLG 635
           +G  PN  T   L+      G + +A  +L  + + G
Sbjct: 596 SGCVPNESTYTILIRGLASEGFVKEAQEILTELCSKG 632



 Score =  123 bits (309), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 81/270 (30%), Positives = 128/270 (47%), Gaps = 16/270 (5%)

Query: 332 QVLKQLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGC 391
           +VL+Q+ +H              G   D  TYTT++    +         LL  M   GC
Sbjct: 378 EVLEQMLEH--------------GCMPDVITYTTVINGFCKEGLIDEAVMLLRSMAACGC 423

Query: 392 QPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMD 451
           +PN V+Y  ++     A    +A ++  QM   GC P+ VT+ TLI+   K G ++ A++
Sbjct: 424 RPNTVSYTIVLKGLCSAERWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIE 483

Query: 452 MYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTY-NIMIALQ 510
           + K+M   G SPD  +YS +I+ LGKAG+   A +L   MV +G  PN + Y +I  AL 
Sbjct: 484 LLKQMLVNGCSPDLISYSTVIDGLGKAGNTDEALELLNVMVKKGMSPNTIIYSSIASALS 543

Query: 511 AKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDE 570
            + R     ++++ ++Q+     D V Y+ V+  L   G  D A    A M     VP+E
Sbjct: 544 GEGR-INKVIQMFENIQDTTVRSDAVLYNAVISSLCKRGETDRAIEFLAYMVSSGCVPNE 602

Query: 571 PVYGLLVDLWGKAGNVRKAWEWYEAMLQAG 600
             Y +L+      G V++A E    +   G
Sbjct: 603 STYTILIRGLASEGFVKEAQEILTELCSKG 632



 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 61/288 (21%), Positives = 117/288 (40%), Gaps = 3/288 (1%)

Query: 461 LSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSAL 520
           ++P+ +TY  ++  L   G +  A  +  +M  +GC P    Y++ +    +A  ++ A+
Sbjct: 107 VAPNAYTYFPLVRALCARGRIADALAVLDDMARRGCAPTPPMYHVTLEAACRASGFRGAV 166

Query: 521 KLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRK-NWVPDEPVYGLLVDL 579
            + RD+   G   D    ++V++ +   G +DEA  +  ++       PD   Y  ++  
Sbjct: 167 GVLRDLHGRGCALDVGNCNLVLQAVCDQGPVDEAVRLLRDLLPSFGCEPDVVSYNAVLRG 226

Query: 580 WGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPS 639
              A       +  E M+ AG  PN+ T ++L+    R G     + +   M   G  P 
Sbjct: 227 LCMARRWGHVQDLMEEMVAAGCPPNIVTFSTLIGHLCRNGLFERVHEVHAQMAEHGCAPD 286

Query: 640 LQTY-TLLLSCCTEARSPYDMGFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFL 698
           ++ Y T++   C E R     G  +  M   G   ++   +    G    +  +     L
Sbjct: 287 VRMYATIIDGVCKEERLEVARGILNR-MPSYGLSPNVVCYNTLLKGLCSADRWEEAEGLL 345

Query: 699 EMMHSEDRESKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAV 746
             M  +D        + +VDFL ++GL +    V E   +    PD +
Sbjct: 346 AEMFDKDCPLDDVTFNILVDFLCQNGLVDRVIEVLEQMLEHGCMPDVI 393


>gi|302822936|ref|XP_002993123.1| hypothetical protein SELMODRAFT_136561 [Selaginella moellendorffii]
 gi|300139014|gb|EFJ05763.1| hypothetical protein SELMODRAFT_136561 [Selaginella moellendorffii]
          Length = 569

 Score =  150 bits (378), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 92/302 (30%), Positives = 153/302 (50%), Gaps = 7/302 (2%)

Query: 339 DHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTY 398
           D  VAL      RR  GF  D  TY+T++  L +A +      + ++M    C P  +TY
Sbjct: 236 DEAVALLLGEVTRR--GFTPDIVTYSTVIDGLCKAGRLRDAVDIFEEM---SCAPTAITY 290

Query: 399 NRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQA 458
           N LI  Y RA  ++EA+ +  +M    C PD +TY TL+    K G LD A +++++M A
Sbjct: 291 NSLIGGYCRAGDMDEAIRLLGKMVDDNCAPDVITYTTLMSAFCKMGRLDDAYELFQQMVA 350

Query: 459 AGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQS 518
             LSPD  T++ +++ L   G ++ A +L  E+  +GC P + TYN ++    K+   + 
Sbjct: 351 NKLSPDVVTFTSLVDGLCGEGRMEDALELLEEITRRGCPPTIYTYNCVVDGYCKSNQVRK 410

Query: 519 ALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPV--YGLL 576
           A +L  D ++ GF P+ VTY+I++      G  D+A     ++  +       V  Y ++
Sbjct: 411 AEELVADFRSRGFVPNTVTYNILVAGCCRAGRTDQALQYLDQLNSEGGPCPTSVAMYAII 470

Query: 577 VDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGL 636
           +D   + G    A ++YE M+Q G  P   T  +++ A  +  Q   A+ LL+ M+  G 
Sbjct: 471 LDALCRDGRTDDAVQFYEEMIQRGYVPAAATFATVVFALCKAHQPQQAHELLEEMIKYGH 530

Query: 637 KP 638
            P
Sbjct: 531 TP 532



 Score =  132 bits (332), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 93/298 (31%), Positives = 146/298 (48%), Gaps = 6/298 (2%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           R  G   D     T++  L  AR       L D+M   G   N  TY  LIH   +A  L
Sbjct: 38  RDRGLSPDPVELNTILAELCDARDTTTAMALFDKMAELG-AVNHTTYYNLIHPLCKARLL 96

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
           +EA+ +   M+  G  P  + +  +I    +AG L  A+ +Y++M  A   PD  TY+ +
Sbjct: 97  DEAMGLLLDMKSRGMNPGTLLHNVVIGGLCRAGRLRHALGVYRQMNDAH-PPDFLTYTKL 155

Query: 472 INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF 531
           ++ L KAG L+ A Q+  EMV+   +P+  T  +++           A +L  +M + G 
Sbjct: 156 VHGLSKAGRLRDAVQVLQEMVSARHVPDNTTLTVVVQSLCLGDRVDDARELVEEMLHRGM 215

Query: 532 EPDKVTYSIVMEVLGHCGYLDEAEA-VFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAW 590
             + +TYS +++ L  C  LDEA A +  E+ R+ + PD   Y  ++D   KAG +R A 
Sbjct: 216 AANAITYSALVDGLCKCERLDEAVALLLGEVTRRGFTPDIVTYSTVIDGLCKAGRLRDAV 275

Query: 591 EWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
           + +E M  A   P   T NSL+  + R G + +A  LL  M++    P + TYT L+S
Sbjct: 276 DIFEEMSCA---PTAITYNSLIGGYCRAGDMDEAIRLLGKMVDDNCAPDVITYTTLMS 330



 Score = 85.5 bits (210), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 56/207 (27%), Positives = 103/207 (49%), Gaps = 4/207 (1%)

Query: 359 DEHTYTTMV-GILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDV 417
           D  T+T++V G+ G  R   A+ +LL+++ R GC P + TYN ++  Y ++N + +A ++
Sbjct: 356 DVVTFTSLVDGLCGEGRMEDAL-ELLEEITRRGCPPTIYTYNCVVDGYCKSNQVRKAEEL 414

Query: 418 FKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAG--LSPDTFTYSVIINCL 475
               +  G  P+ VTY  L+    +AG  D A+    ++ + G         Y++I++ L
Sbjct: 415 VADFRSRGFVPNTVTYNILVAGCCRAGRTDQALQYLDQLNSEGGPCPTSVAMYAIILDAL 474

Query: 476 GKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDK 535
            + G    A Q + EM+ +G +P   T+  ++    KA   Q A +L  +M   G  P  
Sbjct: 475 CRDGRTDDAVQFYEEMIQRGYVPAAATFATVVFALCKAHQPQQAHELLEEMIKYGHTPGP 534

Query: 536 VTYSIVMEVLGHCGYLDEAEAVFAEMR 562
            T   V+      G + +A+ + +E+R
Sbjct: 535 GTCDAVVSAYCRAGMIQKADELASELR 561



 Score = 73.6 bits (179), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 58/209 (27%), Positives = 99/209 (47%), Gaps = 2/209 (0%)

Query: 439 IHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIP 498
           +HA A    +   +  +++  GLSPD    + I+  L  A     A  LF +M   G + 
Sbjct: 20  LHASAKLRHLGPLLLDEIRDRGLSPDPVELNTILAELCDARDTTTAMALFDKMAELGAVN 79

Query: 499 NLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVF 558
           +   YN++  L  KAR    A+ L  DM++ G  P  + +++V+  L   G L  A  V+
Sbjct: 80  HTTYYNLIHPL-CKARLLDEAMGLLLDMKSRGMNPGTLLHNVVIGGLCRAGRLRHALGVY 138

Query: 559 AEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRV 618
            +M   +  PD   Y  LV    KAG +R A +  + M+ A   P+  T   ++ +    
Sbjct: 139 RQMNDAHP-PDFLTYTKLVHGLSKAGRLRDAVQVLQEMVSARHVPDNTTLTVVVQSLCLG 197

Query: 619 GQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
            ++ DA  L++ ML+ G+  +  TY+ L+
Sbjct: 198 DRVDDARELVEEMLHRGMAANAITYSALV 226



 Score = 66.6 bits (161), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 49/173 (28%), Positives = 77/173 (44%), Gaps = 8/173 (4%)

Query: 361 HTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQ 420
           +TY  +V    ++ Q     +L+      G  PN VTYN L+    RA   ++AL    Q
Sbjct: 393 YTYNCVVDGYCKSNQVRKAEELVADFRSRGFVPNTVTYNILVAGCCRAGRTDQALQYLDQ 452

Query: 421 MQVVG--CEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKA 478
           +   G  C      Y  ++D   + G  D A+  Y++M   G  P   T++ ++  L KA
Sbjct: 453 LNSEGGPCPTSVAMYAIILDALCRDGRTDDAVQFYEEMIQRGYVPAAATFATVVFALCKA 512

Query: 479 GHLQAAHQLFCEMVNQGCIPNLVTYNIMIA------LQAKARNYQSALKLYRD 525
              Q AH+L  EM+  G  P   T + +++      +  KA    S L+LY D
Sbjct: 513 HQPQQAHELLEEMIKYGHTPGPGTCDAVVSAYCRAGMIQKADELASELRLYTD 565


>gi|218195055|gb|EEC77482.1| hypothetical protein OsI_16315 [Oryza sativa Indica Group]
          Length = 455

 Score =  150 bits (378), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 93/311 (29%), Positives = 150/311 (48%), Gaps = 4/311 (1%)

Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLL--DQMVRDGCQPNVVTYNR 400
           A+  F+ +  +   K +   Y  ++G  G   Q      LL  D+MV  G    V TYN 
Sbjct: 127 AVKVFDEMLTKGEVKPEAVMYNALIG--GYCDQGKLDTALLYRDRMVERGVAMTVATYNL 184

Query: 401 LIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAG 460
           L+H+        EA ++ ++M   G  PD  TY  LI+ H K G +  A+++++ M   G
Sbjct: 185 LVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRG 244

Query: 461 LSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSAL 520
           +     TY+ +I  L K G +Q   +LF E V +G  P+LV YN +I   + + N   A 
Sbjct: 245 VRATVVTYTSLIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAF 304

Query: 521 KLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLW 580
           ++  +M+     PD VTY+ +M  L   G +DEA  +  EM ++   PD   Y  L+  +
Sbjct: 305 EIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTKRGIQPDLVTYNTLISGY 364

Query: 581 GKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSL 640
              G+V+ A      M+  G  P + T N+L+    + GQ  DA ++++ M+  G+ P  
Sbjct: 365 SMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDD 424

Query: 641 QTYTLLLSCCT 651
            TY  L+   T
Sbjct: 425 STYISLIEGLT 435



 Score =  139 bits (350), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 85/289 (29%), Positives = 148/289 (51%), Gaps = 2/289 (0%)

Query: 362 TYTTMV-GILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQ 420
           TY T++ G   R R   A++ + +   R G  PN  TY  +I  + +   ++EA+ VF +
Sbjct: 74  TYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDE 133

Query: 421 MQVVG-CEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAG 479
           M   G  +P+ V Y  LI  +   G LD A+    +M   G++    TY+++++ L   G
Sbjct: 134 MLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDG 193

Query: 480 HLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYS 539
               A++L  EM  +G  P++ TYNI+I    K  N + AL+++ +M   G     VTY+
Sbjct: 194 RGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYT 253

Query: 540 IVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQA 599
            ++  L   G + E + +F E  R+   PD  +Y  L++    +GN+ +A+E    M + 
Sbjct: 254 SLIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKK 313

Query: 600 GLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
            + P+  T N+L+     +G++ +A  L+  M   G++P L TY  L+S
Sbjct: 314 RIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTKRGIQPDLVTYNTLIS 362



 Score =  137 bits (346), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 88/306 (28%), Positives = 147/306 (48%), Gaps = 1/306 (0%)

Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDG-CQPNVVTYNRL 401
           AL     +R + G   +++TY T++    +  +     K+ D+M+  G  +P  V YN L
Sbjct: 91  ALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNAL 150

Query: 402 IHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGL 461
           I  Y     L+ AL    +M   G      TY  L+      G    A ++ ++M   GL
Sbjct: 151 IGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGL 210

Query: 462 SPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALK 521
           +PD FTY+++IN   K G+++ A ++F  M  +G    +VTY  +I   +K    Q   K
Sbjct: 211 APDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTSLIYALSKKGQVQETDK 270

Query: 522 LYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWG 581
           L+ +    G  PD V Y+ ++      G +D A  +  EM +K   PD+  Y  L+    
Sbjct: 271 LFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLC 330

Query: 582 KAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQ 641
             G V +A +  + M + G++P++ T N+L+S +   G + DA  +   M+N G  P+L 
Sbjct: 331 LLGRVDEARKLIDEMTKRGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLL 390

Query: 642 TYTLLL 647
           TY  L+
Sbjct: 391 TYNALI 396



 Score = 88.2 bits (217), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 84/306 (27%), Positives = 133/306 (43%), Gaps = 57/306 (18%)

Query: 465 TFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYR 524
           T T+++++  L  AG    A +L  +M      PN VTYN +IA        Q+AL + R
Sbjct: 41  TTTFNIMLRHLCSAGKPARALELLRQMPR----PNAVTYNTVIAGFCSRGRVQAALDIMR 96

Query: 525 DM-QNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWV-PDEPVYGLLVDLWGK 582
           +M +  G  P++ TY  V+      G +DEA  VF EM  K  V P+  +Y  L+  +  
Sbjct: 97  EMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCD 156

Query: 583 AGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQT 642
            G +  A  + + M++ G+   V T N L+ A    G+ ++AY L++ M   GL P + T
Sbjct: 157 QGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFT 216

Query: 643 YTLLLSCCTEARSPYDMGFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMH 702
           Y +L++           G C E                        NV+  +  F  M  
Sbjct: 217 YNILIN-----------GHCKE-----------------------GNVKKALEIFENM-- 240

Query: 703 SEDRESKRGLVDAVVDF------LHKSGLKEEAGSVWEVAAQKNVYPDAVKEKGMSYWLI 756
                S+RG+   VV +      L K G  +E   +++ A ++ + PD V    +   LI
Sbjct: 241 -----SRRGVRATVVTYTSLIYALSKKGQVQETDKLFDEAVRRGIRPDLV----LYNALI 291

Query: 757 NLHVMS 762
           N H  S
Sbjct: 292 NSHSTS 297


>gi|38605763|emb|CAE05864.3| OSJNBa0044K18.6 [Oryza sativa Japonica Group]
          Length = 902

 Score =  150 bits (378), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 93/311 (29%), Positives = 149/311 (47%), Gaps = 4/311 (1%)

Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLL--DQMVRDGCQPNVVTYNR 400
           A+  F+ +  +   K +   Y  ++G  G   Q      LL  D+MV  G    V TYN 
Sbjct: 574 AVKVFDEMLTKGEVKPEAVMYNALIG--GYCDQGKLDTALLYRDRMVERGVAMTVATYNL 631

Query: 401 LIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAG 460
           L+H+        EA ++ ++M   G  PD  TY  LI+ H K G +  A+++++ M   G
Sbjct: 632 LVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRG 691

Query: 461 LSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSAL 520
           +     TY+ +I  L K G +Q   +LF E V +G  P+LV YN +I   + + N   A 
Sbjct: 692 VRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAF 751

Query: 521 KLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLW 580
           ++  +M+     PD VTY+ +M  L   G +DEA  +  EM  +   PD   Y  L+  +
Sbjct: 752 EIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGY 811

Query: 581 GKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSL 640
              G+V+ A      M+  G  P + T N+L+    + GQ  DA ++++ M+  G+ P  
Sbjct: 812 SMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDD 871

Query: 641 QTYTLLLSCCT 651
            TY  L+   T
Sbjct: 872 STYISLIEGLT 882



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 85/289 (29%), Positives = 148/289 (51%), Gaps = 2/289 (0%)

Query: 362 TYTTMV-GILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQ 420
           TY T++ G   R R   A++ + +   R G  PN  TY  +I  + +   ++EA+ VF +
Sbjct: 521 TYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDE 580

Query: 421 MQVVG-CEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAG 479
           M   G  +P+ V Y  LI  +   G LD A+    +M   G++    TY+++++ L   G
Sbjct: 581 MLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDG 640

Query: 480 HLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYS 539
               A++L  EM  +G  P++ TYNI+I    K  N + AL+++ +M   G     VTY+
Sbjct: 641 RGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYT 700

Query: 540 IVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQA 599
            ++  L   G + E + +F E  R+   PD  +Y  L++    +GN+ +A+E    M + 
Sbjct: 701 ALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKK 760

Query: 600 GLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
            + P+  T N+L+     +G++ +A  L+  M   G++P L TY  L+S
Sbjct: 761 RIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLIS 809



 Score =  139 bits (350), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 88/306 (28%), Positives = 147/306 (48%), Gaps = 1/306 (0%)

Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDG-CQPNVVTYNRL 401
           AL     +R + G   +++TY T++    +  +     K+ D+M+  G  +P  V YN L
Sbjct: 538 ALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNAL 597

Query: 402 IHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGL 461
           I  Y     L+ AL    +M   G      TY  L+      G    A ++ ++M   GL
Sbjct: 598 IGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGL 657

Query: 462 SPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALK 521
           +PD FTY+++IN   K G+++ A ++F  M  +G    +VTY  +I   +K    Q   K
Sbjct: 658 APDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDK 717

Query: 522 LYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWG 581
           L+ +    G  PD V Y+ ++      G +D A  +  EM +K   PD+  Y  L+    
Sbjct: 718 LFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLC 777

Query: 582 KAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQ 641
             G V +A +  + M + G++P++ T N+L+S +   G + DA  +   M+N G  P+L 
Sbjct: 778 LLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLL 837

Query: 642 TYTLLL 647
           TY  L+
Sbjct: 838 TYNALI 843



 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 84/306 (27%), Positives = 133/306 (43%), Gaps = 57/306 (18%)

Query: 465 TFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYR 524
           T T+++++  L  AG    A +L  +M      PN VTYN +IA        Q+AL + R
Sbjct: 488 TTTFNIMLRHLCSAGKPARALELLRQMPR----PNAVTYNTVIAGFCSRGRVQAALDIMR 543

Query: 525 DM-QNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWV-PDEPVYGLLVDLWGK 582
           +M +  G  P++ TY  V+      G +DEA  VF EM  K  V P+  +Y  L+  +  
Sbjct: 544 EMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCD 603

Query: 583 AGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQT 642
            G +  A  + + M++ G+   V T N L+ A    G+ ++AY L++ M   GL P + T
Sbjct: 604 QGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFT 663

Query: 643 YTLLLSCCTEARSPYDMGFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMH 702
           Y +L++           G C E                        NV+  +  F  M  
Sbjct: 664 YNILIN-----------GHCKE-----------------------GNVKKALEIFENM-- 687

Query: 703 SEDRESKRGLVDAVVDF------LHKSGLKEEAGSVWEVAAQKNVYPDAVKEKGMSYWLI 756
                S+RG+   VV +      L K G  +E   +++ A ++ + PD V    +   LI
Sbjct: 688 -----SRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLV----LYNALI 738

Query: 757 NLHVMS 762
           N H  S
Sbjct: 739 NSHSTS 744


>gi|359492658|ref|XP_002281859.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g19290-like [Vitis vinifera]
          Length = 939

 Score =  150 bits (378), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 136/521 (26%), Positives = 227/521 (43%), Gaps = 74/521 (14%)

Query: 299 ESVSRILRQWKWGPLAEEALGNTNYSMDAYQANQVLKQLQ-DHTVALGFFNWLRRQAGFK 357
           E VSRI R          A+   N+       + VL+ L+ + T +LGFF ++ +Q  F+
Sbjct: 42  ELVSRICRLVLLRRC--NAISKLNFVFSDDIVDAVLRNLRLNPTASLGFFQFVSKQQNFR 99

Query: 358 HDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQ----PNVV----------------T 397
            +  +Y  +V IL R R +      L+Q+V D C+     NV+                 
Sbjct: 100 PNVKSYCKLVHILSRGRMYDETRAYLNQLV-DLCKFKDRGNVIWDELVGVYREFAFSPTV 158

Query: 398 YNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQ 457
           ++ ++  Y        AL VF  M   G  P   +  +L++   K G    A  +Y++M 
Sbjct: 159 FDMILKVYVEKGLTKNALYVFDNMGKCGRIPSLRSCNSLLNNLVKNGETHTAHYVYQQMI 218

Query: 458 AAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQ 517
             G+ PD F  S+++N   K G +  A     +M N G  PN+VTY+ +I       + +
Sbjct: 219 RVGIVPDVFMVSIMVNAFCKDGKVDEAAGFVKKMENLGVEPNIVTYHSLINGYVSLGDVE 278

Query: 518 SALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGY--LDEAEAVFAEMRRKN-WVPDEPVYG 574
           +A  + + M   G   + VTY+++++  G+C    +DEAE V   M+ +   VPDE  YG
Sbjct: 279 AAKGVLKFMSEKGVSRNVVTYTLLIK--GYCKQCKMDEAEKVLRGMQEEAALVPDERAYG 336

Query: 575 LLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNL 634
           +L+D + + G +  A    + ML+ GL+ N+  CNSL++ + + G++ +A  ++  M++ 
Sbjct: 337 VLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMVDW 396

Query: 635 GLKPSLQTYTLLLSCCTEARSPYDMGFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHV 694
            LKP   +Y  LL            G+C E     GH +  F                  
Sbjct: 397 NLKPDSYSYNTLLD-----------GYCRE-----GHTSEAF------------------ 422

Query: 695 GSFLEMMHSEDRESKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAVKEKGMSYW 754
            +  + M  E  E      + ++  L + G  ++A  +W +  ++ V PD V   G S  
Sbjct: 423 -NLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKRGVAPDEV---GYSTL 478

Query: 755 LINLHVMSDGTAVIALSRTLAWFRKQMLISGVGPSRIDIVT 795
           L  L  M +      L     W  K +L  G   SRI   T
Sbjct: 479 LDGLFKMENFEGASTL-----W--KDILARGFTKSRITFNT 512



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 136/570 (23%), Positives = 233/570 (40%), Gaps = 66/570 (11%)

Query: 265 ECVSERFSKPSREMKIPAGLAPFSRHFA-------STGNVVESVSRILRQWKWGPLAEEA 317
           +C  +   K  R M+  A L P  R +         TG + ++V  +    + G      
Sbjct: 309 QCKMDEAEKVLRGMQEEAALVPDERAYGVLIDGYCRTGKIDDAVRLLDEMLRLGL----- 363

Query: 318 LGNTNYSMDAYQANQVLKQLQDHT---VALGFFNWLRRQAGFKHDEHTYTTMVGILGRAR 374
              TN  +     N   K+ + H    V     +W       K D ++Y T++    R  
Sbjct: 364 --KTNLFICNSLINGYCKRGEIHEAEGVITRMVDW-----NLKPDSYSYNTLLDGYCREG 416

Query: 375 QFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYC 434
                  L D+M+++G +P V+TYN L+    R    ++AL ++  M   G  PD V Y 
Sbjct: 417 HTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKRGVAPDEVGYS 476

Query: 435 TLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQ 494
           TL+D   K    + A  ++K + A G +    T++ +I+ L K G +  A ++F +M + 
Sbjct: 477 TLLDGLFKMENFEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDL 536

Query: 495 GCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEA 554
           GC P+ +TY  +I    KA N   A K+   M+     P    Y+ ++  L     L E 
Sbjct: 537 GCSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREPISPSIEMYNSLISGLFKSRRLVEV 596

Query: 555 EAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSA 614
             +  EM  +   P+   YG L+D W K G + KA+  Y  M + GL  N+  C++++S 
Sbjct: 597 TDLLTEMGIRGLTPNIVTYGALIDGWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVSG 656

Query: 615 FLRVGQLSDAYHLLQGMLNLGLKPSLQTYTL--------------LLSCCTEARSPYDM- 659
             R+G++ +A  L+Q M++ G  P  + +                L   C     P ++ 
Sbjct: 657 LYRLGRIDEANLLMQKMVDHGFFPDHECFLKSDIRYAAIQKIADSLDESCKTFLLPNNIV 716

Query: 660 ------GFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHV------GSFLEMMHSEDRE 707
                 G C +   V        +LS+    PD       +      G+  E     D  
Sbjct: 717 YNIAIAGLC-KTGKVDDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEM 775

Query: 708 SKRGLV------DAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAVKEKGMSYWLINLHVM 761
            +RGLV      +A+++ L KS   + A  ++    QK ++P+ V            + +
Sbjct: 776 LRRGLVPNIVTYNALINGLCKSENVDRAQRLFHKLHQKGLFPNVV----------TYNTL 825

Query: 762 SDGTAVIALSRTLAWFRKQMLISGVGPSRI 791
            DG   I         + +M+  G+ PS +
Sbjct: 826 IDGYCKIGNMDAAFKLKDKMIEEGISPSVV 855



 Score =  139 bits (350), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 94/329 (28%), Positives = 148/329 (44%), Gaps = 32/329 (9%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           +  G   D  TY T++    +A   G   K+   M R+   P++  YN LI    ++  L
Sbjct: 534 KDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREPISPSIEMYNSLISGLFKSRRL 593

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
            E  D+  +M + G  P+ VTY  LID   K G LD A   Y +M   GLS +    S +
Sbjct: 594 VEVTDLLTEMGIRGLTPNIVTYGALIDGWCKEGMLDKAFSSYFEMTENGLSANIIICSTM 653

Query: 472 INCLGKAGHLQAAHQLFCEMVNQG--------------------------------CIPN 499
           ++ L + G +  A+ L  +MV+ G                                 +PN
Sbjct: 654 VSGLYRLGRIDEANLLMQKMVDHGFFPDHECFLKSDIRYAAIQKIADSLDESCKTFLLPN 713

Query: 500 LVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFA 559
            + YNI IA   K      A + +  +   GF PD  TY  ++      G +DEA  +  
Sbjct: 714 NIVYNIAIAGLCKTGKVDDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRD 773

Query: 560 EMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVG 619
           EM R+  VP+   Y  L++   K+ NV +A   +  + Q GL PNV T N+L+  + ++G
Sbjct: 774 EMLRRGLVPNIVTYNALINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCKIG 833

Query: 620 QLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
            +  A+ L   M+  G+ PS+ TY+ L++
Sbjct: 834 NMDAAFKLKDKMIEEGISPSVVTYSALIN 862



 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 78/317 (24%), Positives = 144/317 (45%), Gaps = 32/317 (10%)

Query: 363 YTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQ 422
           Y +++  L ++R+   +  LL +M   G  PN+VTY  LI  + +   L++A   + +M 
Sbjct: 580 YNSLISGLFKSRRLVEVTDLLTEMGIRGLTPNIVTYGALIDGWCKEGMLDKAFSSYFEMT 639

Query: 423 VVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPD------------------ 464
             G   + +   T++    + G +D A  + +KM   G  PD                  
Sbjct: 640 ENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGFFPDHECFLKSDIRYAAIQKIA 699

Query: 465 --------TF------TYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQ 510
                   TF       Y++ I  L K G +  A + F  +  +G +P+  TY  +I   
Sbjct: 700 DSLDESCKTFLLPNNIVYNIAIAGLCKTGKVDDARRFFSMLSLKGFVPDNFTYCTLIHGY 759

Query: 511 AKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDE 570
           + A N   A +L  +M   G  P+ VTY+ ++  L     +D A+ +F ++ +K   P+ 
Sbjct: 760 SAAGNVDEAFRLRDEMLRRGLVPNIVTYNALINGLCKSENVDRAQRLFHKLHQKGLFPNV 819

Query: 571 PVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQG 630
             Y  L+D + K GN+  A++  + M++ G+ P+V T ++L++   + G +  +  LL  
Sbjct: 820 VTYNTLIDGYCKIGNMDAAFKLKDKMIEEGISPSVVTYSALINGLCKHGDIERSMKLLNQ 879

Query: 631 MLNLGLKPSLQTYTLLL 647
           M+  G+   L  Y  L+
Sbjct: 880 MIKAGVDSKLIEYCTLV 896



 Score =  108 bits (270), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 85/347 (24%), Positives = 157/347 (45%), Gaps = 37/347 (10%)

Query: 337 LQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQ-PNV 395
           L D   A G   ++  + G   +  TYT ++    +  +     K+L  M  +    P+ 
Sbjct: 274 LGDVEAAKGVLKFMS-EKGVSRNVVTYTLLIKGYCKQCKMDEAEKVLRGMQEEAALVPDE 332

Query: 396 VTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKK 455
             Y  LI  Y R   +++A+ +  +M  +G + +     +LI+ + K G +  A  +  +
Sbjct: 333 RAYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITR 392

Query: 456 MQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMI-------- 507
           M    L PD+++Y+ +++   + GH   A  L  +M+ +G  P ++TYN ++        
Sbjct: 393 MVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGA 452

Query: 508 ---ALQA------------------------KARNYQSALKLYRDMQNAGFEPDKVTYSI 540
              ALQ                         K  N++ A  L++D+   GF   ++T++ 
Sbjct: 453 FDDALQIWHLMMKRGVAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTKSRITFNT 512

Query: 541 VMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAG 600
           ++  L   G + EAE +F +M+     PD   Y  L+D + KA NV +A++   AM +  
Sbjct: 513 MISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREP 572

Query: 601 LRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
           + P++   NSL+S   +  +L +   LL  M   GL P++ TY  L+
Sbjct: 573 ISPSIEMYNSLISGLFKSRRLVEVTDLLTEMGIRGLTPNIVTYGALI 619



 Score =  107 bits (267), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 76/271 (28%), Positives = 128/271 (47%), Gaps = 23/271 (8%)

Query: 329 QANQVLKQLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKL---LDQ 385
           +AN +++++ DH              GF  D   +      L    ++ AI K+   LD+
Sbjct: 665 EANLLMQKMVDH--------------GFFPDHECF------LKSDIRYAAIQKIADSLDE 704

Query: 386 MVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGF 445
             +    PN + YN  I    +   +++A   F  + + G  PD  TYCTLI  ++ AG 
Sbjct: 705 SCKTFLLPNNIVYNIAIAGLCKTGKVDDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGN 764

Query: 446 LDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNI 505
           +D A  +  +M   GL P+  TY+ +IN L K+ ++  A +LF ++  +G  PN+VTYN 
Sbjct: 765 VDEAFRLRDEMLRRGLVPNIVTYNALINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNT 824

Query: 506 MIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKN 565
           +I    K  N  +A KL   M   G  P  VTYS ++  L   G ++ +  +  +M +  
Sbjct: 825 LIDGYCKIGNMDAAFKLKDKMIEEGISPSVVTYSALINGLCKHGDIERSMKLLNQMIKAG 884

Query: 566 WVPDEPVYGLLVDLWGKAGNVRKAWEWYEAM 596
                  Y  LV  + ++G ++K  + Y+ M
Sbjct: 885 VDSKLIEYCTLVQGYIRSGEMQKIHKLYDMM 915



 Score =  102 bits (253), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 70/270 (25%), Positives = 130/270 (48%), Gaps = 7/270 (2%)

Query: 364 TTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQV 423
           +TMV  L R  +    N L+ +MV  G  P+   + +    Y     + ++LD   +  +
Sbjct: 651 STMVSGLYRLGRIDEANLLMQKMVDHGFFPDHECFLKSDIRYAAIQKIADSLDESCKTFL 710

Query: 424 VGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQA 483
           +   P+ + Y   I    K G +D A   +  +   G  PD FTY  +I+    AG++  
Sbjct: 711 L---PNNIVYNIAIAGLCKTGKVDDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDE 767

Query: 484 AHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVME 543
           A +L  EM+ +G +PN+VTYN +I    K+ N   A +L+  +   G  P+ VTY+ +++
Sbjct: 768 AFRLRDEMLRRGLVPNIVTYNALINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLID 827

Query: 544 VLGHC--GYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGL 601
             G+C  G +D A  +  +M  +   P    Y  L++   K G++ ++ +    M++AG+
Sbjct: 828 --GYCKIGNMDAAFKLKDKMIEEGISPSVVTYSALINGLCKHGDIERSMKLLNQMIKAGV 885

Query: 602 RPNVPTCNSLLSAFLRVGQLSDAYHLLQGM 631
              +    +L+  ++R G++   + L   M
Sbjct: 886 DSKLIEYCTLVQGYIRSGEMQKIHKLYDMM 915



 Score = 53.5 bits (127), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 30/116 (25%), Positives = 55/116 (47%)

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
           Q G   +  TY T++    +     A  KL D+M+ +G  P+VVTY+ LI+   +   + 
Sbjct: 812 QKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKDKMIEEGISPSVVTYSALINGLCKHGDIE 871

Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTY 468
            ++ +  QM   G +   + YCTL+  + ++G +     +Y  M    LS    ++
Sbjct: 872 RSMKLLNQMIKAGVDSKLIEYCTLVQGYIRSGEMQKIHKLYDMMHIRCLSTTAISH 927


>gi|255660802|gb|ACU25570.1| pentatricopeptide repeat-containing protein [Glandularia
           microphylla]
          Length = 418

 Score =  150 bits (378), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 85/279 (30%), Positives = 152/279 (54%)

Query: 370 LGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPD 429
           L + + F  +    ++ +  G   ++  +N L+HS+ +   +  A  VF  +   G  P 
Sbjct: 111 LMKLKYFKLVWGFYEESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPS 170

Query: 430 RVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFC 489
            V++ TL++ + K G LD    +   MQA+G+ PD +TYSV+IN L K   +  A++LF 
Sbjct: 171 VVSFNTLMNGYIKLGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFD 230

Query: 490 EMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCG 549
           EM++ G +PN VT+  +I    K      A+++Y+ M +    PD +TY+ ++  L   G
Sbjct: 231 EMLDNGLVPNGVTFTTLIDGHCKNGRVVLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKG 290

Query: 550 YLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCN 609
            L +A+ +  EM  K   PD+  Y  L+D   K G++  A E+ + M++  +R +     
Sbjct: 291 DLKQAQDLIDEMSMKGLKPDKITYTTLIDGSCKEGDLETALEYRKRMIKENIRLDDVAYT 350

Query: 610 SLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
           +L+S   + G+  DA  +L+ ML++GLKP + TYT++++
Sbjct: 351 ALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIIN 389



 Score =  122 bits (306), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 80/316 (25%), Positives = 154/316 (48%), Gaps = 10/316 (3%)

Query: 335 KQLQDHTVALGFFNWL------RRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVR 388
           +++ +H + L +F  +        + G+    + +  ++    +  +      + D + +
Sbjct: 105 RKVLEHLMKLKYFKLVWGFYEESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITK 164

Query: 389 DGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDV 448
            G +P+VV++N L++ Y +   L+E   +   MQ  G +PD  TY  LI+   K   +D 
Sbjct: 165 WGLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDD 224

Query: 449 AMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIA 508
           A +++ +M   GL P+  T++ +I+   K G +  A +++ +M++Q   P+L+TYN +I 
Sbjct: 225 ANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVVLAMEIYKQMLSQSLSPDLITYNTLIY 284

Query: 509 LQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHC--GYLDEAEAVFAEMRRKNW 566
              K  + + A  L  +M   G +PDK+TY+ +++  G C  G L+ A      M ++N 
Sbjct: 285 GLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLID--GSCKEGDLETALEYRKRMIKENI 342

Query: 567 VPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYH 626
             D+  Y  L+    + G    A +    ML  GL+P + T   +++ F + G +     
Sbjct: 343 RLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSK 402

Query: 627 LLQGMLNLGLKPSLQT 642
           LL+ M   G  PS+ T
Sbjct: 403 LLKEMQRDGYVPSVVT 418



 Score = 56.2 bits (134), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 35/157 (22%), Positives = 78/157 (49%), Gaps = 1/157 (0%)

Query: 499 NLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVF 558
           ++  ++ +I    ++   + A++ YR  +   F     T   V+E L    Y       +
Sbjct: 65  DIYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFY 124

Query: 559 AEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRV 618
            E     +      + +L+  + K G +R A   ++A+ + GLRP+V + N+L++ ++++
Sbjct: 125 EESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKL 184

Query: 619 GQLSDAYHLLQGMLNLGLKPSLQTYTLLLS-CCTEAR 654
           G L + + L   M   G++P + TY++L++  C E++
Sbjct: 185 GDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESK 221


>gi|224054488|ref|XP_002298285.1| predicted protein [Populus trichocarpa]
 gi|222845543|gb|EEE83090.1| predicted protein [Populus trichocarpa]
          Length = 575

 Score =  150 bits (378), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 90/349 (25%), Positives = 173/349 (49%), Gaps = 6/349 (1%)

Query: 334 LKQLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQP 393
            KQL+   +      WL+ Q  +  +E  +  ++   G+   F     +L  M  +G  P
Sbjct: 90  FKQLKKWDLVSEILEWLQSQHWWDFNEMDFLMLITAYGKLGDFNGAEMVLRSMNGNGYVP 149

Query: 394 NVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMY 453
           NVV++  L+ +YGR    N A  +F++MQ  G EP  +TY  ++    +      A +++
Sbjct: 150 NVVSHTALMEAYGRGGRYNNAEAIFRRMQTSGPEPSALTYQIILKTFVEGNKFKEAEEVF 209

Query: 454 KKM---QAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQ 510
           + +   + + L PD   + ++I    KAG+ + A ++F  M  +G   + VTYN +++ +
Sbjct: 210 ETLLNKENSPLEPDQKMFHMMIYMQKKAGNYEKARKVFALMAERGVPQSTVTYNSLMSFE 269

Query: 511 AKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDE 570
               NY+   K+Y  MQ +G  PD V+Y+++++  G     +EA AVF EM      P  
Sbjct: 270 T---NYKEVSKIYDQMQRSGLRPDVVSYALLIKAYGRARREEEALAVFEEMLDAGVRPSH 326

Query: 571 PVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQG 630
             Y +L+D +  +G V +A   +++M +    P++ +  ++LSA++    +  A +  + 
Sbjct: 327 KAYNILLDAFAISGMVEQARVVFKSMRRDRCTPDLCSYTTMLSAYVNASDMEGAENFFKR 386

Query: 631 MLNLGLKPSLQTYTLLLSCCTEARSPYDMGFCHELMAVSGHPAHMFLLS 679
           +   GLKP++ TY  L+    +  +   M   +E M ++   A+  +L+
Sbjct: 387 LRQDGLKPNVVTYGALIKGHAKVNNLEKMMEIYEEMQLNSIKANQTILT 435



 Score =  114 bits (284), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 60/204 (29%), Positives = 103/204 (50%)

Query: 376 FGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCT 435
           +  ++K+ DQM R G +P+VV+Y  LI +YGRA    EAL VF++M   G  P    Y  
Sbjct: 272 YKEVSKIYDQMQRSGLRPDVVSYALLIKAYGRARREEEALAVFEEMLDAGVRPSHKAYNI 331

Query: 436 LIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQG 495
           L+D  A +G ++ A  ++K M+    +PD  +Y+ +++    A  ++ A   F  +   G
Sbjct: 332 LLDAFAISGMVEQARVVFKSMRRDRCTPDLCSYTTMLSAYVNASDMEGAENFFKRLRQDG 391

Query: 496 CIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAE 555
             PN+VTY  +I   AK  N +  +++Y +MQ    + ++   + +M+  G       A 
Sbjct: 392 LKPNVVTYGALIKGHAKVNNLEKMMEIYEEMQLNSIKANQTILTTIMDAYGKNKDFGSAV 451

Query: 556 AVFAEMRRKNWVPDEPVYGLLVDL 579
             + EM      PD+    +L+ L
Sbjct: 452 IWYKEMEHHGVPPDQKAQNILLSL 475



 Score =  108 bits (271), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 63/255 (24%), Positives = 124/255 (48%), Gaps = 3/255 (1%)

Query: 359 DEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVF 418
           D+  +  M+ +  +A  +    K+   M   G   + VTYN L+      NY  E   ++
Sbjct: 223 DQKMFHMMIYMQKKAGNYEKARKVFALMAERGVPQSTVTYNSLMSF--ETNY-KEVSKIY 279

Query: 419 KQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKA 478
            QMQ  G  PD V+Y  LI  + +A   + A+ ++++M  AG+ P    Y+++++    +
Sbjct: 280 DQMQRSGLRPDVVSYALLIKAYGRARREEEALAVFEEMLDAGVRPSHKAYNILLDAFAIS 339

Query: 479 GHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTY 538
           G ++ A  +F  M    C P+L +Y  M++    A + + A   ++ ++  G +P+ VTY
Sbjct: 340 GMVEQARVVFKSMRRDRCTPDLCSYTTMLSAYVNASDMEGAENFFKRLRQDGLKPNVVTY 399

Query: 539 SIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQ 598
             +++       L++   ++ EM+  +   ++ +   ++D +GK  +   A  WY+ M  
Sbjct: 400 GALIKGHAKVNNLEKMMEIYEEMQLNSIKANQTILTTIMDAYGKNKDFGSAVIWYKEMEH 459

Query: 599 AGLRPNVPTCNSLLS 613
            G+ P+    N LLS
Sbjct: 460 HGVPPDQKAQNILLS 474



 Score = 72.0 bits (175), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 43/164 (26%), Positives = 81/164 (49%), Gaps = 1/164 (0%)

Query: 354 AGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNE 413
           AG +     Y  ++     +        +   M RD C P++ +Y  ++ +Y  A+ +  
Sbjct: 320 AGVRPSHKAYNILLDAFAISGMVEQARVVFKSMRRDRCTPDLCSYTTMLSAYVNASDMEG 379

Query: 414 ALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIIN 473
           A + FK+++  G +P+ VTY  LI  HAK   L+  M++Y++MQ   +  +    + I++
Sbjct: 380 AENFFKRLRQDGLKPNVVTYGALIKGHAKVNNLEKMMEIYEEMQLNSIKANQTILTTIMD 439

Query: 474 CLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQ 517
             GK     +A   + EM + G  P+    NI+++L AK ++ Q
Sbjct: 440 AYGKNKDFGSAVIWYKEMEHHGVPPDQKAQNILLSL-AKTQDEQ 482



 Score = 65.1 bits (157), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 32/126 (25%), Positives = 64/126 (50%)

Query: 362 TYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQM 421
           +YTTM+     A           ++ +DG +PNVVTY  LI  + + N L + ++++++M
Sbjct: 363 SYTTMLSAYVNASDMEGAENFFKRLRQDGLKPNVVTYGALIKGHAKVNNLEKMMEIYEEM 422

Query: 422 QVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHL 481
           Q+   + ++    T++D + K      A+  YK+M+  G+ PD    +++++        
Sbjct: 423 QLNSIKANQTILTTIMDAYGKNKDFGSAVIWYKEMEHHGVPPDQKAQNILLSLAKTQDEQ 482

Query: 482 QAAHQL 487
           + A QL
Sbjct: 483 KEASQL 488


>gi|297807691|ref|XP_002871729.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297317566|gb|EFH47988.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 504

 Score =  149 bits (377), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 92/317 (29%), Positives = 165/317 (52%), Gaps = 7/317 (2%)

Query: 334 LKQLQDHTVALGFFNWLRRQA-GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQ 392
           + +++ + V +  + W + Q  G  H+  T   ++    R  Q       L +M++ G +
Sbjct: 91  ISKMKKYDVVI--YLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMMKLGHE 148

Query: 393 PNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDM 452
           P++VT+  L++ + R + + +AL +F +M  +G EP+ V Y T+ID   K+  +D A+D+
Sbjct: 149 PDIVTFGSLLNGFCRGDRIYDALYMFDRMVEMGYEPNVVIYNTIIDGLCKSKQVDNALDL 208

Query: 453 YKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAK 512
             +M+  G+ PD  TY+ +I+ L  +G    A ++   M  +   P++ T+N +I    K
Sbjct: 209 LNRMEVDGIRPDAVTYNSLISGLCNSGRWDDATRMVSCMTKREIYPDVFTFNALIDACVK 268

Query: 513 ARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGY--LDEAEAVFAEMRRKNWVPDE 570
                 A +LY +M     +PD VTYS++  + G C Y  LDEAE +F  M  K   PD 
Sbjct: 269 EGRISEAEELYEEMIRRSLDPDIVTYSLL--IYGLCMYSRLDEAEQMFGFMVSKGCFPDV 326

Query: 571 PVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQG 630
             Y +L++ + K+  V    + +  M Q G+  N  T   L+  + R G+L+ A  + + 
Sbjct: 327 VTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTVLIQGYCRAGKLNVAEEIFKW 386

Query: 631 MLNLGLKPSLQTYTLLL 647
           M+  G+ P++ TY +LL
Sbjct: 387 MVFCGVPPNIITYNVLL 403



 Score =  140 bits (353), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 88/297 (29%), Positives = 155/297 (52%), Gaps = 4/297 (1%)

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
           + G++ +   Y T++  L +++Q      LL++M  DG +P+ VTYN LI     +   +
Sbjct: 179 EMGYEPNVVIYNTIIDGLCKSKQVDNALDLLNRMEVDGIRPDAVTYNSLISGLCNSGRWD 238

Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
           +A  +   M      PD  T+  LID   K G +  A ++Y++M    L PD  TYS++I
Sbjct: 239 DATRMVSCMTKREIYPDVFTFNALIDACVKEGRISEAEELYEEMIRRSLDPDIVTYSLLI 298

Query: 473 NCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFE 532
             L     L  A Q+F  MV++GC P++VTY+I+I    K++  +  +KL+ +M   G  
Sbjct: 299 YGLCMYSRLDEAEQMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVV 358

Query: 533 PDKVTYSIVMEVLGHC--GYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAW 590
            + VTY+++++  G+C  G L+ AE +F  M      P+   Y +L+      G + KA 
Sbjct: 359 RNTVTYTVLIQ--GYCRAGKLNVAEEIFKWMVFCGVPPNIITYNVLLHGLCDNGKIEKAL 416

Query: 591 EWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
                M ++G+  ++ T N ++    + G+++DA+ L   +   GL P + TYT ++
Sbjct: 417 VILADMQKSGMDADIVTYNIIIRGMCKAGEVADAWDLYCSLNLKGLTPDIWTYTAMM 473



 Score =  139 bits (349), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 89/309 (28%), Positives = 158/309 (51%), Gaps = 5/309 (1%)

Query: 341 TVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNR 400
           ++AL F   + +  G + D  T+ +++    R  +      + D+MV  G +PNVV YN 
Sbjct: 133 SLALSFLGKMMK-LGHEPDIVTFGSLLNGFCRGDRIYDALYMFDRMVEMGYEPNVVIYNT 191

Query: 401 LIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAG 460
           +I    ++  ++ ALD+  +M+V G  PD VTY +LI     +G  D A  M   M    
Sbjct: 192 IIDGLCKSKQVDNALDLLNRMEVDGIRPDAVTYNSLISGLCNSGRWDDATRMVSCMTKRE 251

Query: 461 LSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSAL 520
           + PD FT++ +I+   K G +  A +L+ EM+ +   P++VTY+++I           A 
Sbjct: 252 IYPDVFTFNALIDACVKEGRISEAEELYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAE 311

Query: 521 KLYRDMQNAGFEPDKVTYSIVMEVLGHC--GYLDEAEAVFAEMRRKNWVPDEPVYGLLVD 578
           +++  M + G  PD VTYSI++   G+C    ++    +F EM ++  V +   Y +L+ 
Sbjct: 312 QMFGFMVSKGCFPDVVTYSILIN--GYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTVLIQ 369

Query: 579 LWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKP 638
            + +AG +  A E ++ M+  G+ PN+ T N LL      G++  A  +L  M   G+  
Sbjct: 370 GYCRAGKLNVAEEIFKWMVFCGVPPNIITYNVLLHGLCDNGKIEKALVILADMQKSGMDA 429

Query: 639 SLQTYTLLL 647
            + TY +++
Sbjct: 430 DIVTYNIII 438



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 78/285 (27%), Positives = 147/285 (51%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           G + D  TY +++  L  + ++    +++  M +    P+V T+N LI +  +   ++EA
Sbjct: 216 GIRPDAVTYNSLISGLCNSGRWDDATRMVSCMTKREIYPDVFTFNALIDACVKEGRISEA 275

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
            +++++M     +PD VTY  LI        LD A  M+  M + G  PD  TYS++IN 
Sbjct: 276 EELYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEQMFGFMVSKGCFPDVVTYSILING 335

Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPD 534
             K+  ++   +LFCEM  +G + N VTY ++I    +A     A ++++ M   G  P+
Sbjct: 336 YCKSKKVEHGMKLFCEMSQRGVVRNTVTYTVLIQGYCRAGKLNVAEEIFKWMVFCGVPPN 395

Query: 535 KVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYE 594
            +TY++++  L   G +++A  + A+M++     D   Y +++    KAG V  AW+ Y 
Sbjct: 396 IITYNVLLHGLCDNGKIEKALVILADMQKSGMDADIVTYNIIIRGMCKAGEVADAWDLYC 455

Query: 595 AMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPS 639
           ++   GL P++ T  +++    + G   +A  L + M   G+ P+
Sbjct: 456 SLNLKGLTPDIWTYTAMMLGLYKKGLRGEADALFRKMKEDGILPN 500



 Score =  117 bits (292), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 68/256 (26%), Positives = 129/256 (50%)

Query: 393 PNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDM 452
           P++  ++RL+ +  +    +  + +++QMQ++G   +  T   L++   +   L +A+  
Sbjct: 79  PSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSF 138

Query: 453 YKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAK 512
             KM   G  PD  T+  ++N   +   +  A  +F  MV  G  PN+V YN +I    K
Sbjct: 139 LGKMMKLGHEPDIVTFGSLLNGFCRGDRIYDALYMFDRMVEMGYEPNVVIYNTIIDGLCK 198

Query: 513 ARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPV 572
           ++   +AL L   M+  G  PD VTY+ ++  L + G  D+A  + + M ++   PD   
Sbjct: 199 SKQVDNALDLLNRMEVDGIRPDAVTYNSLISGLCNSGRWDDATRMVSCMTKREIYPDVFT 258

Query: 573 YGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGML 632
           +  L+D   K G + +A E YE M++  L P++ T + L+       +L +A  +   M+
Sbjct: 259 FNALIDACVKEGRISEAEELYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEQMFGFMV 318

Query: 633 NLGLKPSLQTYTLLLS 648
           + G  P + TY++L++
Sbjct: 319 SKGCFPDVVTYSILIN 334



 Score =  110 bits (275), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 67/212 (31%), Positives = 111/212 (52%)

Query: 359 DEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVF 418
           D  TY+ ++  L    +     ++   MV  GC P+VVTY+ LI+ Y ++  +   + +F
Sbjct: 290 DIVTYSLLIYGLCMYSRLDEAEQMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLF 349

Query: 419 KQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKA 478
            +M   G   + VTY  LI  + +AG L+VA +++K M   G+ P+  TY+V+++ L   
Sbjct: 350 CEMSQRGVVRNTVTYTVLIQGYCRAGKLNVAEEIFKWMVFCGVPPNIITYNVLLHGLCDN 409

Query: 479 GHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTY 538
           G ++ A  +  +M   G   ++VTYNI+I    KA     A  LY  +   G  PD  TY
Sbjct: 410 GKIEKALVILADMQKSGMDADIVTYNIIIRGMCKAGEVADAWDLYCSLNLKGLTPDIWTY 469

Query: 539 SIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDE 570
           + +M  L   G   EA+A+F +M+    +P+E
Sbjct: 470 TAMMLGLYKKGLRGEADALFRKMKEDGILPNE 501



 Score = 93.2 bits (230), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 61/250 (24%), Positives = 118/250 (47%)

Query: 398 YNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQ 457
           Y  ++ +  R   L+++LD+F  M      P    +  L+   +K    DV + ++++MQ
Sbjct: 49  YREMLRNGIRYMKLDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQ 108

Query: 458 AAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQ 517
             G+  +  T ++++NC  +   L  A     +M+  G  P++VT+  ++    +     
Sbjct: 109 MLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMMKLGHEPDIVTFGSLLNGFCRGDRIY 168

Query: 518 SALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLV 577
            AL ++  M   G+EP+ V Y+ +++ L     +D A  +   M      PD   Y  L+
Sbjct: 169 DALYMFDRMVEMGYEPNVVIYNTIIDGLCKSKQVDNALDLLNRMEVDGIRPDAVTYNSLI 228

Query: 578 DLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLK 637
                +G    A      M +  + P+V T N+L+ A ++ G++S+A  L + M+   L 
Sbjct: 229 SGLCNSGRWDDATRMVSCMTKREIYPDVFTFNALIDACVKEGRISEAEELYEEMIRRSLD 288

Query: 638 PSLQTYTLLL 647
           P + TY+LL+
Sbjct: 289 PDIVTYSLLI 298



 Score = 80.5 bits (197), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 49/147 (33%), Positives = 73/147 (49%)

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
           Q G   +  TYT ++    RA +     ++   MV  G  PN++TYN L+H       + 
Sbjct: 354 QRGVVRNTVTYTVLIQGYCRAGKLNVAEEIFKWMVFCGVPPNIITYNVLLHGLCDNGKIE 413

Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
           +AL +   MQ  G + D VTY  +I    KAG +  A D+Y  +   GL+PD +TY+ ++
Sbjct: 414 KALVILADMQKSGMDADIVTYNIIIRGMCKAGEVADAWDLYCSLNLKGLTPDIWTYTAMM 473

Query: 473 NCLGKAGHLQAAHQLFCEMVNQGCIPN 499
             L K G    A  LF +M   G +PN
Sbjct: 474 LGLYKKGLRGEADALFRKMKEDGILPN 500



 Score = 70.1 bits (170), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 50/207 (24%), Positives = 88/207 (42%)

Query: 446 LDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNI 505
           LD ++D++  M      P    +S +++ + K         L+ +M   G   NL T NI
Sbjct: 62  LDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNI 121

Query: 506 MIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKN 565
           ++    +      AL     M   G EPD VT+  ++        + +A  +F  M    
Sbjct: 122 LLNCFCRCSQLSLALSFLGKMMKLGHEPDIVTFGSLLNGFCRGDRIYDALYMFDRMVEMG 181

Query: 566 WVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAY 625
           + P+  +Y  ++D   K+  V  A +    M   G+RP+  T NSL+S     G+  DA 
Sbjct: 182 YEPNVVIYNTIIDGLCKSKQVDNALDLLNRMEVDGIRPDAVTYNSLISGLCNSGRWDDAT 241

Query: 626 HLLQGMLNLGLKPSLQTYTLLLSCCTE 652
            ++  M    + P + T+  L+  C +
Sbjct: 242 RMVSCMTKREIYPDVFTFNALIDACVK 268



 Score = 65.1 bits (157), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 58/275 (21%), Positives = 110/275 (40%), Gaps = 35/275 (12%)

Query: 481 LQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSI 540
           L  +  LF  MV    +P++  ++ +++  +K + Y   + L+  MQ  G   +  T +I
Sbjct: 62  LDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNI 121

Query: 541 VMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAG 600
           ++     C  L  A +   +M +    PD   +G L++ + +   +  A   ++ M++ G
Sbjct: 122 LLNCFCRCSQLSLALSFLGKMMKLGHEPDIVTFGSLLNGFCRGDRIYDALYMFDRMVEMG 181

Query: 601 LRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMG 660
             PNV   N+++    +  Q+ +A  LL  M   G++P   TY  L+S           G
Sbjct: 182 YEPNVVIYNTIIDGLCKSKQVDNALDLLNRMEVDGIRPDAVTYNSLIS-----------G 230

Query: 661 FCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRESKRGLVDAVVDFL 720
            C+     SG                     D     +  M   +        +A++D  
Sbjct: 231 LCN-----SGR-------------------WDDATRMVSCMTKREIYPDVFTFNALIDAC 266

Query: 721 HKSGLKEEAGSVWEVAAQKNVYPDAVKEKGMSYWL 755
            K G   EA  ++E   ++++ PD V    + Y L
Sbjct: 267 VKEGRISEAEELYEEMIRRSLDPDIVTYSLLIYGL 301


>gi|302767030|ref|XP_002966935.1| hypothetical protein SELMODRAFT_87043 [Selaginella moellendorffii]
 gi|300164926|gb|EFJ31534.1| hypothetical protein SELMODRAFT_87043 [Selaginella moellendorffii]
          Length = 428

 Score =  149 bits (377), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 96/294 (32%), Positives = 147/294 (50%), Gaps = 1/294 (0%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           G+     TYTT++  L ++    A   LL +M   GC PNVVTY  LI    +A   ++A
Sbjct: 40  GYDASVVTYTTLIDGLCKSGDLDAAQALLQKMADAGCAPNVVTYTALIDGLCKARRPHDA 99

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVA-MDMYKKMQAAGLSPDTFTYSVIIN 473
           +   K+M   GCEPD VTY +LI     A  +D A + + + M  +G  PD  TY+  I+
Sbjct: 100 IQTVKRMLRSGCEPDLVTYNSLIHGLCMANRMDDAGLVLQELMIESGRIPDVVTYNTFIS 159

Query: 474 CLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEP 533
            L KAG L    ++  EM   G  P++VT+  +I+   KA     A ++++ M   G  P
Sbjct: 160 GLCKAGKLDKGLEMLEEMDRGGISPDVVTFCSIISGLCKANRIDDAFQVFKGMLERGCVP 219

Query: 534 DKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWY 593
           D +TYSI+++ L     LD  E V   M +         Y  L+    +AG++  A   Y
Sbjct: 220 DSLTYSIMLDNLSRANRLDTVEEVLEHMVKSGHYALSATYAPLIHALIRAGDIESASWAY 279

Query: 594 EAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
           E  ++AG    V T N+ + A  R G+   A ++L GM+  G  P+L +Y  ++
Sbjct: 280 EQAMEAGCVMEVYTHNAFIGALCRSGKFPLAKNILLGMIESGSLPNLLSYNFVI 333



 Score =  144 bits (364), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 97/315 (30%), Positives = 157/315 (49%), Gaps = 37/315 (11%)

Query: 354 AGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNE 413
           AG   +  TYT ++  L +AR+     + + +M+R GC+P++VTYN LIH    AN +++
Sbjct: 74  AGCAPNVVTYTALIDGLCKARRPHDAIQTVKRMLRSGCEPDLVTYNSLIHGLCMANRMDD 133

Query: 414 ALDVFKQMQV-VGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
           A  V +++ +  G  PD VTY T I    KAG LD  ++M ++M   G+SPD  T+  II
Sbjct: 134 AGLVLQELMIESGRIPDVVTYNTFISGLCKAGKLDKGLEMLEEMDRGGISPDVVTFCSII 193

Query: 473 NCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFE 532
           + L KA  +  A Q+F  M+ +GC+P+ +TY+IM+   ++A    +  ++   M  +G  
Sbjct: 194 SGLCKANRIDDAFQVFKGMLERGCVPDSLTYSIMLDNLSRANRLDTVEEVLEHMVKSGHY 253

Query: 533 PDKVTYS--------------------------IVMEVLGHCGYLDE---------AEAV 557
               TY+                           VMEV  H  ++           A+ +
Sbjct: 254 ALSATYAPLIHALIRAGDIESASWAYEQAMEAGCVMEVYTHNAFIGALCRSGKFPLAKNI 313

Query: 558 FAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAG-LRPNVPTCNSLLSAFL 616
              M     +P+   Y  ++D   K+GNV  AW+    ML +G  +P+V   N+L+S F 
Sbjct: 314 LLGMIESGSLPNLLSYNFVIDGLCKSGNVDDAWKLSRKMLDSGCCKPDVIFFNTLISGFC 373

Query: 617 RVGQLSDAYHLLQGM 631
           + G+LS A  LL+ M
Sbjct: 374 KAGRLSQAQQLLKEM 388



 Score =  122 bits (306), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 81/246 (32%), Positives = 120/246 (48%), Gaps = 1/246 (0%)

Query: 429 DRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLF 488
           D   Y TLI    KA     A+++   M A G      TY+ +I+ L K+G L AA  L 
Sbjct: 9   DAAIYNTLIAGLCKARKPRHALELLHVMAANGYDASVVTYTTLIDGLCKSGDLDAAQALL 68

Query: 489 CEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHC 548
            +M + GC PN+VTY  +I    KAR    A++  + M  +G EPD VTY+ ++  L   
Sbjct: 69  QKMADAGCAPNVVTYTALIDGLCKARRPHDAIQTVKRMLRSGCEPDLVTYNSLIHGLCMA 128

Query: 549 GYLDEAEAVFAE-MRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPT 607
             +D+A  V  E M     +PD   Y   +    KAG + K  E  E M + G+ P+V T
Sbjct: 129 NRMDDAGLVLQELMIESGRIPDVVTYNTFISGLCKAGKLDKGLEMLEEMDRGGISPDVVT 188

Query: 608 CNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGFCHELMA 667
             S++S   +  ++ DA+ + +GML  G  P   TY+++L   + A     +    E M 
Sbjct: 189 FCSIISGLCKANRIDDAFQVFKGMLERGCVPDSLTYSIMLDNLSRANRLDTVEEVLEHMV 248

Query: 668 VSGHPA 673
            SGH A
Sbjct: 249 KSGHYA 254



 Score =  115 bits (289), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 81/288 (28%), Positives = 136/288 (47%), Gaps = 37/288 (12%)

Query: 350 LRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRAN 409
           L  ++G   D  TY T +  L +A +     ++L++M R G  P+VVT+  +I    +AN
Sbjct: 141 LMIESGRIPDVVTYNTFISGLCKAGKLDKGLEMLEEMDRGGISPDVVTFCSIISGLCKAN 200

Query: 410 YLNEALDVFKQMQVVGCEPDRVTYCTLID------------------------------- 438
            +++A  VFK M   GC PD +TY  ++D                               
Sbjct: 201 RIDDAFQVFKGMLERGCVPDSLTYSIMLDNLSRANRLDTVEEVLEHMVKSGHYALSATYA 260

Query: 439 --IHA--KAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQ 494
             IHA  +AG ++ A   Y++   AG   + +T++  I  L ++G    A  +   M+  
Sbjct: 261 PLIHALIRAGDIESASWAYEQAMEAGCVMEVYTHNAFIGALCRSGKFPLAKNILLGMIES 320

Query: 495 GCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF-EPDKVTYSIVMEVLGHCGYLDE 553
           G +PNL++YN +I    K+ N   A KL R M ++G  +PD + ++ ++      G L +
Sbjct: 321 GSLPNLLSYNFVIDGLCKSGNVDDAWKLSRKMLDSGCCKPDVIFFNTLISGFCKAGRLSQ 380

Query: 554 AEAVFAEMRRKN-WVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAG 600
           A+ +  EM+ KN  VPD   Y  ++D   K G++++A    E M   G
Sbjct: 381 AQQLLKEMKAKNICVPDVVTYNTMIDGQSKFGSLKQAKLLLEEMQAVG 428



 Score =  113 bits (282), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 101/351 (28%), Positives = 155/351 (44%), Gaps = 18/351 (5%)

Query: 394 NVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMY 453
           +   YN LI    +A     AL++   M   G +   VTY TLID   K+G LD A  + 
Sbjct: 9   DAAIYNTLIAGLCKARKPRHALELLHVMAANGYDASVVTYTTLIDGLCKSGDLDAAQALL 68

Query: 454 KKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMI-ALQAK 512
           +KM  AG +P+  TY+ +I+ L KA     A Q    M+  GC P+LVTYN +I  L   
Sbjct: 69  QKMADAGCAPNVVTYTALIDGLCKARRPHDAIQTVKRMLRSGCEPDLVTYNSLIHGLCMA 128

Query: 513 ARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPV 572
            R   + L L   M  +G  PD VTY+  +  L   G LD+   +  EM R    PD   
Sbjct: 129 NRMDDAGLVLQELMIESGRIPDVVTYNTFISGLCKAGKLDKGLEMLEEMDRGGISPDVVT 188

Query: 573 YGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGML 632
           +  ++    KA  +  A++ ++ ML+ G  P+  T + +L    R  +L     +L+ M+
Sbjct: 189 FCSIISGLCKANRIDDAFQVFKGMLERGCVPDSLTYSIMLDNLSRANRLDTVEEVLEHMV 248

Query: 633 NLGLKPSLQTYTLLLSCCTEARSPYDMGFCHE-------LMAVSGHPAHMFLLSMPSPGP 685
             G      TY  L+     A       + +E       +M V  H A +  L      P
Sbjct: 249 KSGHYALSATYAPLIHALIRAGDIESASWAYEQAMEAGCVMEVYTHNAFIGALCRSGKFP 308

Query: 686 DGQNVRDHVGSFLEMMHSEDRESKRGLVDAVVDFLHKSGLKEEAGSVWEVA 736
             +N+       L M+ S    +     + V+D L KSG  ++A   W+++
Sbjct: 309 LAKNI------LLGMIESGSLPNLLS-YNFVIDGLCKSGNVDDA---WKLS 349



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 49/187 (26%), Positives = 76/187 (40%), Gaps = 1/187 (0%)

Query: 561 MRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQ 620
           M  +++  D  +Y  L+    KA   R A E    M   G   +V T  +L+    + G 
Sbjct: 1   MASRHFRLDAAIYNTLIAGLCKARKPRHALELLHVMAANGYDASVVTYTTLIDGLCKSGD 60

Query: 621 LSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGFCHELMAVSGHPAHMFLLSM 680
           L  A  LLQ M + G  P++ TYT L+    +AR P+D     + M  SG    +   + 
Sbjct: 61  LDAAQALLQKMADAGCAPNVVTYTALIDGLCKARRPHDAIQTVKRMLRSGCEPDLVTYNS 120

Query: 681 PSPGPDGQNVRDHVGSFL-EMMHSEDRESKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQK 739
              G    N  D  G  L E+M    R       +  +  L K+G  ++   + E   + 
Sbjct: 121 LIHGLCMANRMDDAGLVLQELMIESGRIPDVVTYNTFISGLCKAGKLDKGLEMLEEMDRG 180

Query: 740 NVYPDAV 746
            + PD V
Sbjct: 181 GISPDVV 187


>gi|224069254|ref|XP_002302938.1| predicted protein [Populus trichocarpa]
 gi|222844664|gb|EEE82211.1| predicted protein [Populus trichocarpa]
          Length = 599

 Score =  149 bits (377), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 83/263 (31%), Positives = 145/263 (55%)

Query: 385 QMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAG 444
           +++  G  PNV T+N L++   +   + +A  +F +++  G +P  V++ TLI+ + K+G
Sbjct: 222 EILDSGYPPNVYTFNVLMNRLCKEGKVKDAQLIFDEIRKTGLQPTAVSFNTLINGYCKSG 281

Query: 445 FLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYN 504
            L+    +   M+   + PD FTYS +I+ L K   L+ A+ LF EM ++G +PN VT+ 
Sbjct: 282 NLEEGFRLKMVMEEFRVFPDVFTYSALIDGLCKECQLEDANHLFKEMCDRGLVPNDVTFT 341

Query: 505 IMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRK 564
            +I  Q K      AL++Y+ M   G + D V Y+ +++ L   GY  EA     EM ++
Sbjct: 342 TLINGQCKNGRVDLALEIYQQMFTKGLKADLVLYNTLIDGLCKGGYFREARKFVGEMTKR 401

Query: 565 NWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDA 624
             +PD+  Y  L+D   K G++  A E  + M++ G++ +     +++S   R G++ DA
Sbjct: 402 GLIPDKFTYTTLLDGSCKEGDLELALEMRKEMVKEGIQLDNVAFTAIISGLCRDGKIVDA 461

Query: 625 YHLLQGMLNLGLKPSLQTYTLLL 647
              L+ ML  GLKP   TYT+++
Sbjct: 462 ERTLREMLRAGLKPDDGTYTMVM 484



 Score =  149 bits (375), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 83/255 (32%), Positives = 139/255 (54%)

Query: 393 PNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDM 452
           P+V TY+ LI    +   L +A  +FK+M   G  P+ VT+ TLI+   K G +D+A+++
Sbjct: 300 PDVFTYSALIDGLCKECQLEDANHLFKEMCDRGLVPNDVTFTTLINGQCKNGRVDLALEI 359

Query: 453 YKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAK 512
           Y++M   GL  D   Y+ +I+ L K G+ + A +   EM  +G IP+  TY  ++    K
Sbjct: 360 YQQMFTKGLKADLVLYNTLIDGLCKGGYFREARKFVGEMTKRGLIPDKFTYTTLLDGSCK 419

Query: 513 ARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPV 572
             + + AL++ ++M   G + D V ++ ++  L   G + +AE    EM R    PD+  
Sbjct: 420 EGDLELALEMRKEMVKEGIQLDNVAFTAIISGLCRDGKIVDAERTLREMLRAGLKPDDGT 479

Query: 573 YGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGML 632
           Y +++D + K G+V+  ++  + M   G  P V T N L++   + GQ+ +A  LL  ML
Sbjct: 480 YTMVMDGFCKKGDVKMGFKLLKEMQSDGHIPGVITYNVLMNGLCKQGQVKNADMLLNAML 539

Query: 633 NLGLKPSLQTYTLLL 647
           NLG+ P   TY +LL
Sbjct: 540 NLGVVPDDITYNILL 554



 Score =  125 bits (314), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 81/265 (30%), Positives = 129/265 (48%)

Query: 359 DEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVF 418
           D  TY+ ++  L +  Q    N L  +M   G  PN VT+  LI+   +   ++ AL+++
Sbjct: 301 DVFTYSALIDGLCKECQLEDANHLFKEMCDRGLVPNDVTFTTLINGQCKNGRVDLALEIY 360

Query: 419 KQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKA 478
           +QM   G + D V Y TLID   K G+   A     +M   GL PD FTY+ +++   K 
Sbjct: 361 QQMFTKGLKADLVLYNTLIDGLCKGGYFREARKFVGEMTKRGLIPDKFTYTTLLDGSCKE 420

Query: 479 GHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTY 538
           G L+ A ++  EMV +G   + V +  +I+   +      A +  R+M  AG +PD  TY
Sbjct: 421 GDLELALEMRKEMVKEGIQLDNVAFTAIISGLCRDGKIVDAERTLREMLRAGLKPDDGTY 480

Query: 539 SIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQ 598
           ++VM+     G +     +  EM+    +P    Y +L++   K G V+ A     AML 
Sbjct: 481 TMVMDGFCKKGDVKMGFKLLKEMQSDGHIPGVITYNVLMNGLCKQGQVKNADMLLNAMLN 540

Query: 599 AGLRPNVPTCNSLLSAFLRVGQLSD 623
            G+ P+  T N LL    + G+L D
Sbjct: 541 LGVVPDDITYNILLQGHCKHGKLGD 565



 Score = 99.0 bits (245), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 75/271 (27%), Positives = 121/271 (44%), Gaps = 42/271 (15%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           G   ++ T+TT++    +  +     ++  QM   G + ++V YN LI    +  Y  EA
Sbjct: 332 GLVPNDVTFTTLINGQCKNGRVDLALEIYQQMFTKGLKADLVLYNTLIDGLCKGGYFREA 391

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQA---------------- 458
                +M   G  PD+ TY TL+D   K G L++A++M K+M                  
Sbjct: 392 RKFVGEMTKRGLIPDKFTYTTLLDGSCKEGDLELALEMRKEMVKEGIQLDNVAFTAIISG 451

Query: 459 -------------------AGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPN 499
                              AGL PD  TY+++++   K G ++   +L  EM + G IP 
Sbjct: 452 LCRDGKIVDAERTLREMLRAGLKPDDGTYTMVMDGFCKKGDVKMGFKLLKEMQSDGHIPG 511

Query: 500 LVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHC--GYLDEAEAV 557
           ++TYN+++    K    ++A  L   M N G  PD +TY+I+++  GHC  G L + + V
Sbjct: 512 VITYNVLMNGLCKQGQVKNADMLLNAMLNLGVVPDDITYNILLQ--GHCKHGKLGDFQNV 569

Query: 558 FAEMRRKNWVPDEPVYGLLVDLWGKAGNVRK 588
             EM     V D   Y  L+    KA   R+
Sbjct: 570 KTEM---GLVSDYASYRSLLHELSKASKDRQ 597


>gi|414586649|tpg|DAA37220.1| TPA: hypothetical protein ZEAMMB73_348855 [Zea mays]
 gi|414586650|tpg|DAA37221.1| TPA: hypothetical protein ZEAMMB73_348855 [Zea mays]
          Length = 969

 Score =  149 bits (377), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 95/322 (29%), Positives = 152/322 (47%), Gaps = 36/322 (11%)

Query: 362 TYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQM 421
           TY  ++  L +A +     +LLD M  +GC+PN + Y+ LI  + +   L+ A +VF +M
Sbjct: 613 TYGALIDGLCKAHKVVDAQELLDVMSSNGCEPNHIIYDALIDGFCKVGKLDNAQEVFFRM 672

Query: 422 QVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHL 481
              G  P   TY +LID   K   LD+A+ +  +M  +  +P+  TY+ +I+ L + G  
Sbjct: 673 SKCGYLPTVHTYTSLIDAMFKDRRLDLAIKVLSQMLESSCTPNVVTYTAMIDGLCRIGEC 732

Query: 482 QAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIV 541
           Q A +L   M  +GC PN+VTY  +I    K+     +L+L+  M   G  P+ VTY ++
Sbjct: 733 QKALKLLSMMEKRGCNPNVVTYTSLIDGLGKSGKVDMSLQLFTQMITQGCAPNYVTYRVL 792

Query: 542 MEVLGHCGYLDEAEAVFAEMRRKNW---------------------------------VP 568
           +      G LDEA ++ +EM++  W                                 V 
Sbjct: 793 INHCCAAGLLDEAHSLLSEMKQTYWPKYVQGYCSVVQGFSKKFIASLGLLEELESHGMVS 852

Query: 569 DEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVP---TCNSLLSAFLRVGQLSDAY 625
             PVYGLL+D + KAG + KA E ++ M++     N+    T  SL+ A     QL  A+
Sbjct: 853 IAPVYGLLIDSFSKAGRLEKALELHKEMMEVSSSLNITSKDTYTSLIQALCLASQLEKAF 912

Query: 626 HLLQGMLNLGLKPSLQTYTLLL 647
            L   +   G+ P L  +  L+
Sbjct: 913 ELYSEITRKGVVPELSAFICLI 934



 Score =  147 bits (372), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 93/314 (29%), Positives = 148/314 (47%), Gaps = 16/314 (5%)

Query: 350 LRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRAN 409
           L  + GF  D  TY+ ++  L  A +      L  +M   G  P+V TY  LI S+ +  
Sbjct: 445 LMMRKGFVPDTSTYSKVITFLCEAMKVEKAFLLFQEMKSVGVIPDVYTYTILIDSFCKVG 504

Query: 410 YLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYS 469
            + +A   F +M+ VGC P  VTY  L+  + K   +  A D++ +M  AG +P+T TYS
Sbjct: 505 LIEQARSWFDEMESVGCSPSVVTYTALLHAYLKTKQVPQASDIFHRMVDAGCAPNTITYS 564

Query: 470 VIINCLGKAGHLQAAHQLFCEMV----------------NQGCIPNLVTYNIMIALQAKA 513
            +++ L KAG  Q A +++ +M+                     PN+VTY  +I    KA
Sbjct: 565 ALVDGLCKAGESQKACEVYAKMIGTSDNVGSDFYFEGEHTDSIAPNVVTYGALIDGLCKA 624

Query: 514 RNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVY 573
                A +L   M + G EP+ + Y  +++     G LD A+ VF  M +  ++P    Y
Sbjct: 625 HKVVDAQELLDVMSSNGCEPNHIIYDALIDGFCKVGKLDNAQEVFFRMSKCGYLPTVHTY 684

Query: 574 GLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLN 633
             L+D   K   +  A +    ML++   PNV T  +++    R+G+   A  LL  M  
Sbjct: 685 TSLIDAMFKDRRLDLAIKVLSQMLESSCTPNVVTYTAMIDGLCRIGECQKALKLLSMMEK 744

Query: 634 LGLKPSLQTYTLLL 647
            G  P++ TYT L+
Sbjct: 745 RGCNPNVVTYTSLI 758



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 83/289 (28%), Positives = 140/289 (48%), Gaps = 16/289 (5%)

Query: 375 QFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYC 434
           +F    +++  M+R G  P+  TY+++I     A  + +A  +F++M+ VG  PD  TY 
Sbjct: 435 KFDKAFQIIKLMMRKGFVPDTSTYSKVITFLCEAMKVEKAFLLFQEMKSVGVIPDVYTYT 494

Query: 435 TLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQ 494
            LID   K G ++ A   + +M++ G SP   TY+ +++   K   +  A  +F  MV+ 
Sbjct: 495 ILIDSFCKVGLIEQARSWFDEMESVGCSPSVVTYTALLHAYLKTKQVPQASDIFHRMVDA 554

Query: 495 GCIPNLVTYNIMIALQAKARNYQSALKLYRDM----QNAG----FE--------PDKVTY 538
           GC PN +TY+ ++    KA   Q A ++Y  M     N G    FE        P+ VTY
Sbjct: 555 GCAPNTITYSALVDGLCKAGESQKACEVYAKMIGTSDNVGSDFYFEGEHTDSIAPNVVTY 614

Query: 539 SIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQ 598
             +++ L     + +A+ +   M      P+  +Y  L+D + K G +  A E +  M +
Sbjct: 615 GALIDGLCKAHKVVDAQELLDVMSSNGCEPNHIIYDALIDGFCKVGKLDNAQEVFFRMSK 674

Query: 599 AGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
            G  P V T  SL+ A  +  +L  A  +L  ML     P++ TYT ++
Sbjct: 675 CGYLPTVHTYTSLIDAMFKDRRLDLAIKVLSQMLESSCTPNVVTYTAMI 723



 Score =  126 bits (317), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 78/287 (27%), Positives = 141/287 (49%), Gaps = 5/287 (1%)

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
           + G+    HTYT+++  + + R+     K+L QM+   C PNVVTY  +I    R     
Sbjct: 674 KCGYLPTVHTYTSLIDAMFKDRRLDLAIKVLSQMLESSCTPNVVTYTAMIDGLCRIGECQ 733

Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
           +AL +   M+  GC P+ VTY +LID   K+G +D+++ ++ +M   G +P+  TY V+I
Sbjct: 734 KALKLLSMMEKRGCNPNVVTYTSLIDGLGKSGKVDMSLQLFTQMITQGCAPNYVTYRVLI 793

Query: 473 NCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFE 532
           N    AG L  AH L  EM  Q   P  V     + +Q  ++ + ++L L  ++++ G  
Sbjct: 794 NHCCAAGLLDEAHSLLSEM-KQTYWPKYVQGYCSV-VQGFSKKFIASLGLLEELESHGMV 851

Query: 533 PDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNW---VPDEPVYGLLVDLWGKAGNVRKA 589
                Y ++++     G L++A  +  EM   +    +  +  Y  L+     A  + KA
Sbjct: 852 SIAPVYGLLIDSFSKAGRLEKALELHKEMMEVSSSLNITSKDTYTSLIQALCLASQLEKA 911

Query: 590 WEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGL 636
           +E Y  + + G+ P +     L+   ++V + ++A  L   M + G+
Sbjct: 912 FELYSEITRKGVVPELSAFICLIKGLIKVNKWNEALQLCYSMCDEGV 958



 Score =  122 bits (306), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 92/364 (25%), Positives = 153/364 (42%), Gaps = 63/364 (17%)

Query: 347 FNWLRRQAGFKHDE------HTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNR 400
             W +R      +E        + ++V     AR +    KLL++M   GC P  V YN 
Sbjct: 325 LGWCKRIISMMMNEGCNPNPSLFNSLVHSYCNARDYPYAYKLLNRMAGCGCPPGYVVYNI 384

Query: 401 LIHSY--------------------------------GRANY---------LNEALDVFK 419
            I S                                   AN+          ++A  + K
Sbjct: 385 FIGSICSGEELPSPDLLALAEKVYEEMLASSCVLNKVNTANFARCLCGMGKFDKAFQIIK 444

Query: 420 QMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAG 479
            M   G  PD  TY  +I    +A  ++ A  ++++M++ G+ PD +TY+++I+   K G
Sbjct: 445 LMMRKGFVPDTSTYSKVITFLCEAMKVEKAFLLFQEMKSVGVIPDVYTYTILIDSFCKVG 504

Query: 480 HLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYS 539
            ++ A   F EM + GC P++VTY  ++    K +    A  ++  M +AG  P+ +TYS
Sbjct: 505 LIEQARSWFDEMESVGCSPSVVTYTALLHAYLKTKQVPQASDIFHRMVDAGCAPNTITYS 564

Query: 540 IVMEVLGHCGYLDEAEAVFAEM----------------RRKNWVPDEPVYGLLVDLWGKA 583
            +++ L   G   +A  V+A+M                   +  P+   YG L+D   KA
Sbjct: 565 ALVDGLCKAGESQKACEVYAKMIGTSDNVGSDFYFEGEHTDSIAPNVVTYGALIDGLCKA 624

Query: 584 GNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTY 643
             V  A E  + M   G  PN    ++L+  F +VG+L +A  +   M   G  P++ TY
Sbjct: 625 HKVVDAQELLDVMSSNGCEPNHIIYDALIDGFCKVGKLDNAQEVFFRMSKCGYLPTVHTY 684

Query: 644 TLLL 647
           T L+
Sbjct: 685 TSLI 688



 Score =  120 bits (301), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 89/381 (23%), Positives = 169/381 (44%), Gaps = 27/381 (7%)

Query: 322 NYSMDAYQANQVLKQLQDHTV---ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGA 378
           ++ +D     Q++  L + ++   A+ F + +R  +    +  TY T++    + +Q G 
Sbjct: 269 DFKLDTVLCTQMISGLMEASLFDEAISFLHRMRCNSCIP-NVVTYRTLLAGFLKKKQLGW 327

Query: 379 INKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLI- 437
             +++  M+ +GC PN   +N L+HSY  A     A  +  +M   GC P  V Y   I 
Sbjct: 328 CKRIISMMMNEGCNPNPSLFNSLVHSYCNARDYPYAYKLLNRMAGCGCPPGYVVYNIFIG 387

Query: 438 -----DIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMV 492
                +       L +A  +Y++M A+    +    +    CL   G    A Q+   M+
Sbjct: 388 SICSGEELPSPDLLALAEKVYEEMLASSCVLNKVNTANFARCLCGMGKFDKAFQIIKLMM 447

Query: 493 NQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLD 552
            +G +P+  TY+ +I    +A   + A  L+++M++ G  PD  TY+I+++     G ++
Sbjct: 448 RKGFVPDTSTYSKVITFLCEAMKVEKAFLLFQEMKSVGVIPDVYTYTILIDSFCKVGLIE 507

Query: 553 EAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLL 612
           +A + F EM      P    Y  L+  + K   V +A + +  M+ AG  PN  T ++L+
Sbjct: 508 QARSWFDEMESVGCSPSVVTYTALLHAYLKTKQVPQASDIFHRMVDAGCAPNTITYSALV 567

Query: 613 SAFLRVGQLSDAYHLLQGML----NLG------------LKPSLQTYTLLLSCCTEARSP 656
               + G+   A  +   M+    N+G            + P++ TY  L+    +A   
Sbjct: 568 DGLCKAGESQKACEVYAKMIGTSDNVGSDFYFEGEHTDSIAPNVVTYGALIDGLCKAHKV 627

Query: 657 YDMGFCHELMAVSG-HPAHMF 676
            D     ++M+ +G  P H+ 
Sbjct: 628 VDAQELLDVMSSNGCEPNHII 648



 Score =  103 bits (258), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 99/423 (23%), Positives = 157/423 (37%), Gaps = 108/423 (25%)

Query: 333 VLKQLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGIL---GRA-------RQFG----- 377
           VL+ ++   + + FF W  RQ G+ H    Y  +  +L    RA       R+ G     
Sbjct: 110 VLRSVRTPELCVRFFLWAERQVGYSHTGACYNALAEVLHFDDRARTTERLLREIGEDDRE 169

Query: 378 AINKLLDQMVRDGC--------------------QPNVVTYNRLIHSYGRANYLNEALDV 417
            + +LL+ +VR  C                    +P+  TYN L+     A  ++    V
Sbjct: 170 VLGRLLNVIVRKCCRHGAWAKALEELGRLKDFGYRPSGATYNALVQVLATAGQMDMGFRV 229

Query: 418 FKQMQVVGCEPDRVT-------------------------------YCT-LIDIHAKAGF 445
            K+M  +G   D+ T                                CT +I    +A  
Sbjct: 230 QKEMSELGFCTDKFTVGCFAQALCKEGRWSDALVMIEREDFKLDTVLCTQMISGLMEASL 289

Query: 446 LDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNI 505
            D A+    +M+     P+  TY  ++    K   L    ++   M+N+GC PN   +N 
Sbjct: 290 FDEAISFLHRMRCNSCIPNVVTYRTLLAGFLKKKQLGWCKRIISMMMNEGCNPNPSLFNS 349

Query: 506 MIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVM----------------------- 542
           ++     AR+Y  A KL   M   G  P  V Y+I +                       
Sbjct: 350 LVHSYCNARDYPYAYKLLNRMAGCGCPPGYVVYNIFIGSICSGEELPSPDLLALAEKVYE 409

Query: 543 EVLGH----------------CGY--LDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAG 584
           E+L                  CG    D+A  +   M RK +VPD   Y  ++    +A 
Sbjct: 410 EMLASSCVLNKVNTANFARCLCGMGKFDKAFQIIKLMMRKGFVPDTSTYSKVITFLCEAM 469

Query: 585 NVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYT 644
            V KA+  ++ M   G+ P+V T   L+ +F +VG +  A      M ++G  PS+ TYT
Sbjct: 470 KVEKAFLLFQEMKSVGVIPDVYTYTILIDSFCKVGLIEQARSWFDEMESVGCSPSVVTYT 529

Query: 645 LLL 647
            LL
Sbjct: 530 ALL 532


>gi|255660818|gb|ACU25578.1| pentatricopeptide repeat-containing protein [Junellia uniflora]
          Length = 418

 Score =  149 bits (377), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 84/279 (30%), Positives = 153/279 (54%)

Query: 370 LGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPD 429
           L + + F  +    ++ +  G   ++  +N L+HS+ +   +  A  VF  +   G  P 
Sbjct: 111 LMKLKYFKLVWGFYEESLECGYPASLYFFNILMHSFCKEGEIRLAQSVFDAITKWGLRPS 170

Query: 430 RVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFC 489
            V++ TL++ + K G L+    +   MQA+G+ PD +TYSV+IN L K   L  A++LF 
Sbjct: 171 VVSFNTLMNGYIKLGDLNEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKLDDANELFD 230

Query: 490 EMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCG 549
           EM++ G +PN V++  +I    K      A+++Y+ M +    PD +TY+ ++  L   G
Sbjct: 231 EMLDNGLVPNSVSFTTLIDGHCKDGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKNG 290

Query: 550 YLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCN 609
            L +A+ +  EM  K   PD+  Y  L+D   K G++  A+E+ + M++  +R +     
Sbjct: 291 DLKQAQDLINEMSMKGLKPDKITYTTLIDGSCKEGDLETAFEYRKRMIKENIRLDDVAYT 350

Query: 610 SLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
           +L+S   + G+  DA  +L+ ML++GLKP + TYT++++
Sbjct: 351 ALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIIN 389



 Score = 56.6 bits (135), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 34/139 (24%), Positives = 71/139 (51%), Gaps = 1/139 (0%)

Query: 517 QSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLL 576
           + A++ YR  +   F     T   V+E L    Y       + E     +      + +L
Sbjct: 83  RDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFYEESLECGYPASLYFFNIL 142

Query: 577 VDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGL 636
           +  + K G +R A   ++A+ + GLRP+V + N+L++ ++++G L++ + L   M   G+
Sbjct: 143 MHSFCKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLNEGFRLKNAMQASGV 202

Query: 637 KPSLQTYTLLLS-CCTEAR 654
           +P + TY++L++  C E++
Sbjct: 203 QPDVYTYSVLINGLCKESK 221


>gi|222637127|gb|EEE67259.1| hypothetical protein OsJ_24425 [Oryza sativa Japonica Group]
          Length = 799

 Score =  149 bits (377), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 96/316 (30%), Positives = 154/316 (48%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           G   D   +TT++    R     A     D+M + G   + VTY  LI+   RA  L EA
Sbjct: 350 GVVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEA 409

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
             V ++M+  G + D VTY  LID + K G +  A  ++ KM    ++P+  TY+ + + 
Sbjct: 410 ERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDG 469

Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPD 534
           L K G + AA++L  EM ++G   N+ TYN +I    KA N + A++   DM  AG +PD
Sbjct: 470 LCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPD 529

Query: 535 KVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYE 594
             TY+ ++  L     LD A ++  EM  K   P    Y +L++ +  +G V       E
Sbjct: 530 VYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLE 589

Query: 595 AMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEAR 654
            ML+  + PN  T NSL+  +     +     + +GML+  + P+  TY +L+    +AR
Sbjct: 590 WMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQEVVPNENTYNILIKGHCKAR 649

Query: 655 SPYDMGFCHELMAVSG 670
           +  +  + H  M   G
Sbjct: 650 NMKEALYFHSEMIEKG 665



 Score =  129 bits (323), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 88/326 (26%), Positives = 153/326 (46%), Gaps = 7/326 (2%)

Query: 339 DHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTY 398
           D   A  +F+ ++++ G   D  TYT ++  L RA +     ++L +M   G   + VTY
Sbjct: 370 DLAAARNWFDEMQKR-GLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTY 428

Query: 399 NRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQA 458
             LI  Y +   + EA  V  +M      P+ VTY  L D   K G +  A ++  +M +
Sbjct: 429 TVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCS 488

Query: 459 AGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQS 518
            GL  + FTY+ +IN L KAG+L+ A +   +M   G  P++ TY  +I    +++    
Sbjct: 489 KGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDR 548

Query: 519 ALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVD 578
           A  L ++M + G +P  VTY+++M      G ++  + +   M  KN  P+   Y  L+ 
Sbjct: 549 AHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMK 608

Query: 579 LWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKP 638
            +    N++   E Y+ ML   + PN  T N L+    +   + +A +    M+  G + 
Sbjct: 609 QYCIEKNMKSTTEIYKGMLSQEVVPNENTYNILIKGHCKARNMKEALYFHSEMIEKGFRL 668

Query: 639 SLQTYTLLLSCC------TEARSPYD 658
           +  +Y  L+         TEAR  ++
Sbjct: 669 TASSYNALIRLLNKKKKFTEARRLFE 694



 Score =  123 bits (308), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 88/304 (28%), Positives = 146/304 (48%), Gaps = 11/304 (3%)

Query: 359 DEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVF 418
           D  TY  MV       +     KLL +M   G + N V Y  +I        +++A+ V 
Sbjct: 284 DVVTYGIMVHGYCTLSELETAIKLLSEMAARGLELNPVAYTSVIALLCDEGQVSDAVRVV 343

Query: 419 KQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKA 478
           + M + G   D   + T++    + G L  A + + +MQ  GL+ D  TY+ +IN L +A
Sbjct: 344 EDMVMHGVVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRA 403

Query: 479 GHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTY 538
           G L+ A ++  EM ++G   + VTY ++I    K      A  ++  M      P+ VTY
Sbjct: 404 GELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTY 463

Query: 539 SIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQ 598
           + + + L   G +  A  +  EM  K    +   Y  L++   KAGN+ +A      M +
Sbjct: 464 TALSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDE 523

Query: 599 AGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYD 658
           AGL+P+V T  +++ A  +  +L  A+ LLQ ML+ G+KP++ TY +L++          
Sbjct: 524 AGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMN---------- 573

Query: 659 MGFC 662
            GFC
Sbjct: 574 -GFC 576



 Score =  123 bits (308), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 82/295 (27%), Positives = 145/295 (49%), Gaps = 7/295 (2%)

Query: 362 TYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQM 421
           +Y  ++  L  A +    ++L D+M      P+VVTY  ++H Y   + L  A+ +  +M
Sbjct: 255 SYNILLKALCTAGRIKDAHQLFDEM---ASPPDVVTYGIMVHGYCTLSELETAIKLLSEM 311

Query: 422 QVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHL 481
              G E + V Y ++I +    G +  A+ + + M   G+  D   ++ +++   + G L
Sbjct: 312 AARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDL 371

Query: 482 QAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIV 541
            AA   F EM  +G   + VTY  +I    +A   + A ++ ++M++ G + D VTY+++
Sbjct: 372 AAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVL 431

Query: 542 MEVLGHC--GYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQA 599
           ++  G+C  G + EA  V  +M +K   P+   Y  L D   K G+V  A E    M   
Sbjct: 432 ID--GYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSK 489

Query: 600 GLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEAR 654
           GL  N+ T NSL++   + G L  A   +  M   GLKP + TYT ++    +++
Sbjct: 490 GLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSK 544



 Score =  109 bits (272), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 71/248 (28%), Positives = 122/248 (49%), Gaps = 6/248 (2%)

Query: 362 TYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQM 421
           TYT +   L +     A N+LL +M   G + N+ TYN LI+   +A  L +A+     M
Sbjct: 462 TYTALSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDM 521

Query: 422 QVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHL 481
              G +PD  TY T+I    ++  LD A  + ++M   G+ P   TY+V++N    +G +
Sbjct: 522 DEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRV 581

Query: 482 QAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIV 541
           +   +L   M+ +   PN  TYN ++      +N +S  ++Y+ M +    P++ TY+I+
Sbjct: 582 EGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQEVVPNENTYNIL 641

Query: 542 MEVLGHCGYLDEAEAVF--AEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQA 599
           ++  GHC   +  EA++  +EM  K +      Y  L+ L  K     +A   +E M + 
Sbjct: 642 IK--GHCKARNMKEALYFHSEMIEKGFRLTASSYNALIRLLNKKKKFTEARRLFEKMRKE 699

Query: 600 GL--RPNV 605
            L   P+V
Sbjct: 700 RLTAEPDV 707



 Score = 95.5 bits (236), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 59/202 (29%), Positives = 108/202 (53%), Gaps = 7/202 (3%)

Query: 446 LDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNI 505
           LD A+ +++++       +T +Y++++  L  AG ++ AHQLF EM +    P++VTY I
Sbjct: 238 LDEAVQLFQELP----EKNTCSYNILLKALCTAGRIKDAHQLFDEMASP---PDVVTYGI 290

Query: 506 MIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKN 565
           M+         ++A+KL  +M   G E + V Y+ V+ +L   G + +A  V  +M    
Sbjct: 291 MVHGYCTLSELETAIKLLSEMAARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHG 350

Query: 566 WVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAY 625
            V D  V+  ++  + + G++  A  W++ M + GL  +  T  +L++   R G+L +A 
Sbjct: 351 VVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAE 410

Query: 626 HLLQGMLNLGLKPSLQTYTLLL 647
            +LQ M + GL     TYT+L+
Sbjct: 411 RVLQEMEDKGLDVDAVTYTVLI 432



 Score = 66.2 bits (160), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 50/205 (24%), Positives = 80/205 (39%), Gaps = 35/205 (17%)

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVT--------------- 397
           +AG K D +TYTT++G L ++++    + LL +M+  G +P +VT               
Sbjct: 523 EAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVE 582

Query: 398 --------------------YNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLI 437
                               YN L+  Y     +    +++K M      P+  TY  LI
Sbjct: 583 GGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQEVVPNENTYNILI 642

Query: 438 DIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCI 497
             H KA  +  A+  + +M   G      +Y+ +I  L K      A +LF +M  +   
Sbjct: 643 KGHCKARNMKEALYFHSEMIEKGFRLTASSYNALIRLLNKKKKFTEARRLFEKMRKERLT 702

Query: 498 PNLVTYNIMIALQAKARNYQSALKL 522
                YN  I L     N +S L L
Sbjct: 703 AEPDVYNFYIDLSFNEDNLESTLAL 727


>gi|255660788|gb|ACU25563.1| pentatricopeptide repeat-containing protein [Verbena hastata]
          Length = 418

 Score =  149 bits (377), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 84/279 (30%), Positives = 152/279 (54%)

Query: 370 LGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPD 429
           L + + F  +    ++ +  G   ++  +N L+HS+ +   +  A  VF  +      P 
Sbjct: 111 LMKLKYFKLVWGFYEESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPS 170

Query: 430 RVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFC 489
            V++ TL++ + K G LD    +   MQA+G+ PD +TYSV+IN L K   +  A++LF 
Sbjct: 171 VVSFNTLMNGYIKLGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFD 230

Query: 490 EMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCG 549
           EM++ G +PN VT+  +I    K      A+++Y+ M +    PD +TY+ ++  L   G
Sbjct: 231 EMIDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKG 290

Query: 550 YLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCN 609
            L +A+ +  EM  K   PD+  Y  L+D   K G++  A+E+ + M++  +R +     
Sbjct: 291 DLKQAQDLIDEMSMKGLKPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYT 350

Query: 610 SLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
           +L+S   + G+  DA  +L+ ML++GLKP + TYT++++
Sbjct: 351 ALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIIN 389



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 79/316 (25%), Positives = 154/316 (48%), Gaps = 10/316 (3%)

Query: 335 KQLQDHTVALGFFNWL------RRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVR 388
           +++ +H + L +F  +        + G+    + +  ++    +  +      + D + +
Sbjct: 105 RKVLEHLMKLKYFKLVWGFYEESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITK 164

Query: 389 DGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDV 448
              +P+VV++N L++ Y +   L+E   +   MQ  G +PD  TY  LI+   K   +D 
Sbjct: 165 WSLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDD 224

Query: 449 AMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIA 508
           A +++ +M   GL P+  T++ +I+   K G +  A +++ +M++Q   P+L+TYN +I 
Sbjct: 225 ANELFDEMIDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIY 284

Query: 509 LQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHC--GYLDEAEAVFAEMRRKNW 566
              K  + + A  L  +M   G +PDK+TY+ +++  G+C  G L+ A      M ++N 
Sbjct: 285 GLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLID--GNCKEGDLETAFEYRKRMIKENI 342

Query: 567 VPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYH 626
             D+  Y  L+    + G    A +    ML  GL+P + T   +++ F + G +     
Sbjct: 343 RLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSK 402

Query: 627 LLQGMLNLGLKPSLQT 642
           LL+ M   G  PS+ T
Sbjct: 403 LLKEMQRDGYMPSVVT 418



 Score = 53.9 bits (128), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 33/139 (23%), Positives = 69/139 (49%), Gaps = 1/139 (0%)

Query: 517 QSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLL 576
           + A++ YR  +   F     T   V+E L    Y       + E     +      + +L
Sbjct: 83  RDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFYEESLECGYPASLYFFNIL 142

Query: 577 VDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGL 636
           +  + K G +R A   ++A+ +  LRP+V + N+L++ ++++G L + + L   M   G+
Sbjct: 143 MHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQASGV 202

Query: 637 KPSLQTYTLLLS-CCTEAR 654
           +P + TY++L++  C E++
Sbjct: 203 QPDVYTYSVLINGLCKESK 221


>gi|116310235|emb|CAH67244.1| OSIGBa0140O07.12 [Oryza sativa Indica Group]
          Length = 581

 Score =  149 bits (377), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 100/365 (27%), Positives = 184/365 (50%), Gaps = 11/365 (3%)

Query: 325 MDAYQANQVLKQL----QDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAIN 380
           ++AY  N+++  L    + H V   F  W++ +  +  D  ++  ++  + R  Q     
Sbjct: 211 VEAYAYNKLMSSLIGRGRVHDVVALFERWIQDRL-YSPDVWSFNVVIKGVCRVGQVQKAL 269

Query: 381 KLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVG-CEPDRVTYCTLIDI 439
           +L+++M   GC P+ VT+N ++    R N ++   +V +++Q  G C P+ VT+ ++I  
Sbjct: 270 ELVERMNEFGCSPDTVTHNIIVDGLCRTNEVSRGHEVLRRLQRDGVCMPNVVTFTSVISG 329

Query: 440 HAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPN 499
           + KAG L+ AM +Y  M A+G+ P+T TY+V+IN  GK G L +A +++ +M    C P+
Sbjct: 330 YCKAGKLEDAMAVYNDMVASGIMPNTVTYNVLINGYGKVGDLGSAVEVYQQMTRLRCPPD 389

Query: 500 LVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFA 559
           +VT++ +I    +      AL+++ DM     +P+  T+SI++  L      DEA  +  
Sbjct: 390 VVTFSSLIDGYCRCGQLDDALRIWSDMAQHRIQPNVYTFSIIIHSLCKQNRSDEAIRLLN 449

Query: 560 EMR-RKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRV 618
           E+  R +  P   +Y  ++D+  K G V +A    + M + G RP+  T   L+  +   
Sbjct: 450 ELNLRPDIAPQAFIYNPVIDVLCKCGKVDEANLIRKGMEEKGCRPDKYTYTILIIGYCMK 509

Query: 619 GQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGFCHELMAVSGHPAHMFLL 678
            ++S+A      M+  G  P   T    +SC  +A  P ++   H +   SG  +   + 
Sbjct: 510 SRISEAIMFFHEMVEAGCSPDSITVNCFISCLLKAGMPNEVD--HVMRLASGGASS--IQ 565

Query: 679 SMPSP 683
             PSP
Sbjct: 566 EFPSP 570



 Score =  120 bits (301), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 88/369 (23%), Positives = 165/369 (44%), Gaps = 39/369 (10%)

Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLI 402
           AL  F+ +    G+  D    + +V     A    A   LL +    GC+     YN+L+
Sbjct: 161 ALQLFDQMTTHYGYSPDARFLSFLVSSCTCANLLDASATLLSKASEFGCRVEAYAYNKLM 220

Query: 403 HSYGRANYLNEALDVFKQ-MQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGL 461
            S      +++ + +F++ +Q     PD  ++  +I    + G +  A+++ ++M   G 
Sbjct: 221 SSLIGRGRVHDVVALFERWIQDRLYSPDVWSFNVVIKGVCRVGQVQKALELVERMNEFGC 280

Query: 462 SPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQG-CIPNLVTYNIMIALQAKARNYQSAL 520
           SPDT T+++I++ L +   +   H++   +   G C+PN+VT+  +I+   KA   + A+
Sbjct: 281 SPDTVTHNIIVDGLCRTNEVSRGHEVLRRLQRDGVCMPNVVTFTSVISGYCKAGKLEDAM 340

Query: 521 KLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLW 580
            +Y DM  +G  P+ VTY++++   G  G L  A  V+ +M R    PD   +  L+D +
Sbjct: 341 AVYNDMVASGIMPNTVTYNVLINGYGKVGDLGSAVEVYQQMTRLRCPPDVVTFSSLIDGY 400

Query: 581 GKAGNVRKAWEWYEAMLQAGLRPNVPT--------C------------------------ 608
            + G +  A   +  M Q  ++PNV T        C                        
Sbjct: 401 CRCGQLDDALRIWSDMAQHRIQPNVYTFSIIIHSLCKQNRSDEAIRLLNELNLRPDIAPQ 460

Query: 609 ----NSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYT-LLLSCCTEARSPYDMGFCH 663
               N ++    + G++ +A  + +GM   G +P   TYT L++  C ++R    + F H
Sbjct: 461 AFIYNPVIDVLCKCGKVDEANLIRKGMEEKGCRPDKYTYTILIIGYCMKSRISEAIMFFH 520

Query: 664 ELMAVSGHP 672
           E++     P
Sbjct: 521 EMVEAGCSP 529



 Score =  115 bits (288), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 97/389 (24%), Positives = 178/389 (45%), Gaps = 41/389 (10%)

Query: 361 HTYTTMVGILGRA-RQFGAINKLLDQMVRD-GCQPNVVTYNRLIHSYGRANYLNEALDVF 418
           H+   ++ +L R+ RQ  A+ +L DQM    G  P+    + L+ S   AN L+ +  + 
Sbjct: 143 HSCQQIIVVLCRSGRQADAL-QLFDQMTTHYGYSPDARFLSFLVSSCTCANLLDASATLL 201

Query: 419 KQMQVVGCEPDRVTYCTLID-IHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGK 477
            +    GC  +   Y  L+  +  +    DV     + +Q    SPD ++++V+I  + +
Sbjct: 202 SKASEFGCRVEAYAYNKLMSSLIGRGRVHDVVALFERWIQDRLYSPDVWSFNVVIKGVCR 261

Query: 478 AGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF-EPDKV 536
            G +Q A +L   M   GC P+ VT+NI++    +        ++ R +Q  G   P+ V
Sbjct: 262 VGQVQKALELVERMNEFGCSPDTVTHNIIVDGLCRTNEVSRGHEVLRRLQRDGVCMPNVV 321

Query: 537 TYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAM 596
           T++ V+      G L++A AV+ +M     +P+   Y +L++ +GK G++  A E Y+ M
Sbjct: 322 TFTSVISGYCKAGKLEDAMAVYNDMVASGIMPNTVTYNVLINGYGKVGDLGSAVEVYQQM 381

Query: 597 LQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL-SCCTEARS 655
            +    P+V T +SL+  + R GQL DA  +   M    ++P++ T+++++ S C + RS
Sbjct: 382 TRLRCPPDVVTFSSLIDGYCRCGQLDDALRIWSDMAQHRIQPNVYTFSIIIHSLCKQNRS 441

Query: 656 PYDMGFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRESKRGLVDA 715
              +   +EL                       N+R             D   +  + + 
Sbjct: 442 DEAIRLLNEL-----------------------NLR------------PDIAPQAFIYNP 466

Query: 716 VVDFLHKSGLKEEAGSVWEVAAQKNVYPD 744
           V+D L K G  +EA  + +   +K   PD
Sbjct: 467 VIDVLCKCGKVDEANLIRKGMEEKGCRPD 495


>gi|299473436|emb|CBN77833.1| conserved unknown protein [Ectocarpus siliculosus]
          Length = 1139

 Score =  149 bits (377), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 81/262 (30%), Positives = 137/262 (52%), Gaps = 2/262 (0%)

Query: 391 CQ--PNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDV 448
           CQ  P +VT++ LI   G    +  A   F++M   G  PD     +LI+  AKAG  D 
Sbjct: 123 CQLRPTIVTFSTLISRAGACRRVRLAERFFREMLEAGITPDVQAINSLINAFAKAGSPDQ 182

Query: 449 AMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIA 508
           A+ ++ +M   G++P   T++ +I+  G+AG +  A Q+F  +   G  PN  T++ +I 
Sbjct: 183 ALKVFDQMSRYGVTPSVITFNTLIDACGRAGDIDRARQVFSRLSQAGLSPNDRTFSALIH 242

Query: 509 LQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVP 568
             A       A    ++M+  G EP++VTYS ++   G  G L  A     EM      P
Sbjct: 243 SHAVQGQVDEAFSWLQEMRARGLEPNRVTYSALINACGRAGQLARAFQTLDEMFGTGIEP 302

Query: 569 DEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLL 628
           +   +  L+D  GK   +  +++ ++ M + G  PN  TC++L+ A L+  +L  A+ +L
Sbjct: 303 NVVTWTTLIDACGKGKELEWSFKLFKEMRERGTVPNGVTCSALMDACLKADELDLAFAVL 362

Query: 629 QGMLNLGLKPSLQTYTLLLSCC 650
           + ML++G++P+  TYT LL+ C
Sbjct: 363 EHMLDVGIEPTEVTYTSLLTQC 384



 Score =  142 bits (359), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 83/267 (31%), Positives = 135/267 (50%)

Query: 362 TYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQM 421
           T++T++   G  R+     +   +M+  G  P+V   N LI+++ +A   ++AL VF QM
Sbjct: 131 TFSTLISRAGACRRVRLAERFFREMLEAGITPDVQAINSLINAFAKAGSPDQALKVFDQM 190

Query: 422 QVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHL 481
              G  P  +T+ TLID   +AG +D A  ++ ++  AGLSP+  T+S +I+     G +
Sbjct: 191 SRYGVTPSVITFNTLIDACGRAGDIDRARQVFSRLSQAGLSPNDRTFSALIHSHAVQGQV 250

Query: 482 QAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIV 541
             A     EM  +G  PN VTY+ +I    +A     A +   +M   G EP+ VT++ +
Sbjct: 251 DEAFSWLQEMRARGLEPNRVTYSALINACGRAGQLARAFQTLDEMFGTGIEPNVVTWTTL 310

Query: 542 MEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGL 601
           ++  G    L+ +  +F EMR +  VP+      L+D   KA  +  A+   E ML  G+
Sbjct: 311 IDACGKGKELEWSFKLFKEMRERGTVPNGVTCSALMDACLKADELDLAFAVLEHMLDVGI 370

Query: 602 RPNVPTCNSLLSAFLRVGQLSDAYHLL 628
            P   T  SLL+   R+GQ   A  +L
Sbjct: 371 EPTEVTYTSLLTQCARLGQADRAGIVL 397



 Score =  137 bits (344), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 80/244 (32%), Positives = 120/244 (49%), Gaps = 1/244 (0%)

Query: 346 FFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSY 405
           FF  +  +AG   D     +++    +A       K+ DQM R G  P+V+T+N LI + 
Sbjct: 151 FFREML-EAGITPDVQAINSLINAFAKAGSPDQALKVFDQMSRYGVTPSVITFNTLIDAC 209

Query: 406 GRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDT 465
           GRA  ++ A  VF ++   G  P+  T+  LI  HA  G +D A    ++M+A GL P+ 
Sbjct: 210 GRAGDIDRARQVFSRLSQAGLSPNDRTFSALIHSHAVQGQVDEAFSWLQEMRARGLEPNR 269

Query: 466 FTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRD 525
            TYS +IN  G+AG L  A Q   EM   G  PN+VT+  +I    K +  + + KL+++
Sbjct: 270 VTYSALINACGRAGQLARAFQTLDEMFGTGIEPNVVTWTTLIDACGKGKELEWSFKLFKE 329

Query: 526 MQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGN 585
           M+  G  P+ VT S +M+       LD A AV   M      P E  Y  L+    + G 
Sbjct: 330 MRERGTVPNGVTCSALMDACLKADELDLAFAVLEHMLDVGIEPTEVTYTSLLTQCARLGQ 389

Query: 586 VRKA 589
             +A
Sbjct: 390 ADRA 393



 Score =  122 bits (306), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 63/212 (29%), Positives = 110/212 (51%)

Query: 443 AGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVT 502
           AG +D  +  Y+ M A  L P   T+S +I+  G    ++ A + F EM+  G  P++  
Sbjct: 107 AGRIDDCVAAYEAMLACQLRPTIVTFSTLISRAGACRRVRLAERFFREMLEAGITPDVQA 166

Query: 503 YNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMR 562
            N +I   AKA +   ALK++  M   G  P  +T++ +++  G  G +D A  VF+ + 
Sbjct: 167 INSLINAFAKAGSPDQALKVFDQMSRYGVTPSVITFNTLIDACGRAGDIDRARQVFSRLS 226

Query: 563 RKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLS 622
           +    P++  +  L+      G V +A+ W + M   GL PN  T ++L++A  R GQL+
Sbjct: 227 QAGLSPNDRTFSALIHSHAVQGQVDEAFSWLQEMRARGLEPNRVTYSALINACGRAGQLA 286

Query: 623 DAYHLLQGMLNLGLKPSLQTYTLLLSCCTEAR 654
            A+  L  M   G++P++ T+T L+  C + +
Sbjct: 287 RAFQTLDEMFGTGIEPNVVTWTTLIDACGKGK 318



 Score =  118 bits (296), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 66/222 (29%), Positives = 111/222 (50%), Gaps = 1/222 (0%)

Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLI 402
           AL  F+ + R  G      T+ T++   GRA       ++  ++ + G  PN  T++ LI
Sbjct: 183 ALKVFDQMSRY-GVTPSVITFNTLIDACGRAGDIDRARQVFSRLSQAGLSPNDRTFSALI 241

Query: 403 HSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLS 462
           HS+     ++EA    ++M+  G EP+RVTY  LI+   +AG L  A     +M   G+ 
Sbjct: 242 HSHAVQGQVDEAFSWLQEMRARGLEPNRVTYSALINACGRAGQLARAFQTLDEMFGTGIE 301

Query: 463 PDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKL 522
           P+  T++ +I+  GK   L+ + +LF EM  +G +PN VT + ++    KA     A  +
Sbjct: 302 PNVVTWTTLIDACGKGKELEWSFKLFKEMRERGTVPNGVTCSALMDACLKADELDLAFAV 361

Query: 523 YRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRK 564
              M + G EP +VTY+ ++      G  D A  V  E+ ++
Sbjct: 362 LEHMLDVGIEPTEVTYTSLLTQCARLGQADRAGIVLDELNKR 403



 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 35/147 (23%), Positives = 75/147 (51%), Gaps = 2/147 (1%)

Query: 401 LIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAG 460
           L+  +G+A+ ++ A  V + M      PD  T+  L++    AG LD A+++ ++ +A G
Sbjct: 548 LLQLFGQADQVDAAFKVLEGMVERRDSPDGETWLLLLNAVDTAGALDKAVELMERSRAEG 607

Query: 461 LSPDT--FTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQS 518
              +    TYS ++   G+A  L  A ++   M   G  P   TY  ++ +   +R+ ++
Sbjct: 608 HGSEINELTYSALLGACGRAKKLARAFRIVQSMRETGVKPTEGTYLALMEVCRHSRDSKA 667

Query: 519 ALKLYRDMQNAGFEPDKVTYSIVMEVL 545
           A++++  M+  G  P   +Y+ +++ +
Sbjct: 668 AVEVFEAMETEGVRPGVRSYTSLLKAI 694



 Score = 60.5 bits (145), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 51/187 (27%), Positives = 81/187 (43%), Gaps = 19/187 (10%)

Query: 412  NEALD-------VFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKM----QAAG 460
            N ALD       VF++M+  G  PD   Y  L++  A  G  D A+ + + M    +  G
Sbjct: 869  NPALDNLFRVFLVFQEMRSRGVRPDLRAYNALVNTCADLGEFDRALGVVRLMVDDGEGGG 928

Query: 461  LSPDTFTYSVIINCLGKA--GHLQAAHQLFCEMVNQG------CIPNLVTYNIMIALQAK 512
            L PD  TY+ +I    +A    ++ A ++F  M  +         P  VTY  ++     
Sbjct: 929  LQPDAVTYTSLIKAAARAVPPRVEEAEEIFATMQQRTNHFSTFARPTEVTYAHLMRASVM 988

Query: 513  ARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPV 572
            A +Y  AL+++R   +AG  P   +    +   G  G +D A  V+  MR     P+   
Sbjct: 989  AEDYGRALEIWRQQLSAGVAPGPRSTRAALAACGGAGDVDTALQVYDVMREGGIRPNSRA 1048

Query: 573  YGLLVDL 579
               LV+L
Sbjct: 1049 LLDLVNL 1055



 Score = 56.6 bits (135), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 45/176 (25%), Positives = 81/176 (46%), Gaps = 12/176 (6%)

Query: 487  LFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYR----DMQNAGFEPDKVTYSIVM 542
            +F EM ++G  P+L  YN ++   A    +  AL + R    D +  G +PD VTY+ ++
Sbjct: 881  VFQEMRSRGVRPDLRAYNALVNTCADLGEFDRALGVVRLMVDDGEGGGLQPDAVTYTSLI 940

Query: 543  EVLGHC--GYLDEAEAVFAEMRRKN------WVPDEPVYGLLVDLWGKAGNVRKAWEWYE 594
            +         ++EAE +FA M+++         P E  Y  L+     A +  +A E + 
Sbjct: 941  KAAARAVPPRVEEAEEIFATMQQRTNHFSTFARPTEVTYAHLMRASVMAEDYGRALEIWR 1000

Query: 595  AMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCC 650
              L AG+ P   +  + L+A    G +  A  +   M   G++P+ +    L++ C
Sbjct: 1001 QQLSAGVAPGPRSTRAALAACGGAGDVDTALQVYDVMREGGIRPNSRALLDLVNLC 1056



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 39/149 (26%), Positives = 69/149 (46%), Gaps = 2/149 (1%)

Query: 469 SVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRD--M 526
           S ++   G+A  + AA ++   MV +   P+  T+ +++     A     A++L      
Sbjct: 546 SDLLQLFGQADQVDAAFKVLEGMVERRDSPDGETWLLLLNAVDTAGALDKAVELMERSRA 605

Query: 527 QNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNV 586
           +  G E +++TYS ++   G    L  A  +   MR     P E  Y  L+++   + + 
Sbjct: 606 EGHGSEINELTYSALLGACGRAKKLARAFRIVQSMRETGVKPTEGTYLALMEVCRHSRDS 665

Query: 587 RKAWEWYEAMLQAGLRPNVPTCNSLLSAF 615
           + A E +EAM   G+RP V +  SLL A 
Sbjct: 666 KAAVEVFEAMETEGVRPGVRSYTSLLKAI 694



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 27/111 (24%), Positives = 58/111 (52%), Gaps = 5/111 (4%)

Query: 377 GAINKLLDQMVRD-----GCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRV 431
           GA++K ++ M R      G + N +TY+ L+ + GRA  L  A  + + M+  G +P   
Sbjct: 591 GALDKAVELMERSRAEGHGSEINELTYSALLGACGRAKKLARAFRIVQSMRETGVKPTEG 650

Query: 432 TYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQ 482
           TY  L+++   +     A+++++ M+  G+ P   +Y+ ++  + +   L+
Sbjct: 651 TYLALMEVCRHSRDSKAAVEVFEAMETEGVRPGVRSYTSLLKAISEENTLR 701



 Score = 50.8 bits (120), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 38/134 (28%), Positives = 59/134 (44%), Gaps = 2/134 (1%)

Query: 539 SIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQ 598
           S ++++ G    +D A  V   M  +   PD   + LL++    AG + KA E  E    
Sbjct: 546 SDLLQLFGQADQVDAAFKVLEGMVERRDSPDGETWLLLLNAVDTAGALDKAVELMERSRA 605

Query: 599 AG--LRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSP 656
            G     N  T ++LL A  R  +L+ A+ ++Q M   G+KP+  TY  L+  C  +R  
Sbjct: 606 EGHGSEINELTYSALLGACGRAKKLARAFRIVQSMRETGVKPTEGTYLALMEVCRHSRDS 665

Query: 657 YDMGFCHELMAVSG 670
                  E M   G
Sbjct: 666 KAAVEVFEAMETEG 679



 Score = 49.3 bits (116), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 44/160 (27%), Positives = 69/160 (43%), Gaps = 12/160 (7%)

Query: 352  RQAGFKHDEHTYTTMVGI---LGR-ARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGR 407
            R  G + D   Y  +V     LG   R  G +  ++D     G QP+ VTY  LI +  R
Sbjct: 886  RSRGVRPDLRAYNALVNTCADLGEFDRALGVVRLMVDDGEGGGLQPDAVTYTSLIKAAAR 945

Query: 408  A--NYLNEALDVFKQMQ------VVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAA 459
            A    + EA ++F  MQ           P  VTY  L+     A     A++++++  +A
Sbjct: 946  AVPPRVEEAEEIFATMQQRTNHFSTFARPTEVTYAHLMRASVMAEDYGRALEIWRQQLSA 1005

Query: 460  GLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPN 499
            G++P   +    +   G AG +  A Q++  M   G  PN
Sbjct: 1006 GVAPGPRSTRAALAACGGAGDVDTALQVYDVMREGGIRPN 1045



 Score = 43.5 bits (101), Expect = 0.53,   Method: Compositional matrix adjust.
 Identities = 22/83 (26%), Positives = 42/83 (50%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           G + +E TY+ ++G  GRA++     +++  M   G +P   TY  L+     +     A
Sbjct: 609 GSEINELTYSALLGACGRAKKLARAFRIVQSMRETGVKPTEGTYLALMEVCRHSRDSKAA 668

Query: 415 LDVFKQMQVVGCEPDRVTYCTLI 437
           ++VF+ M+  G  P   +Y +L+
Sbjct: 669 VEVFEAMETEGVRPGVRSYTSLL 691



 Score = 43.1 bits (100), Expect = 0.68,   Method: Compositional matrix adjust.
 Identities = 25/86 (29%), Positives = 40/86 (46%)

Query: 571 PVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQG 630
           P   + +   G AG +      YEAML   LRP + T ++L+S      ++  A    + 
Sbjct: 95  PACNVFLRALGDAGRIDDCVAAYEAMLACQLRPTIVTFSTLISRAGACRRVRLAERFFRE 154

Query: 631 MLNLGLKPSLQTYTLLLSCCTEARSP 656
           ML  G+ P +Q    L++   +A SP
Sbjct: 155 MLEAGITPDVQAINSLINAFAKAGSP 180


>gi|218199706|gb|EEC82133.1| hypothetical protein OsI_26175 [Oryza sativa Indica Group]
          Length = 799

 Score =  149 bits (377), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 96/316 (30%), Positives = 154/316 (48%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           G   D   +TT++    R     A     D+M + G   + VTY  LI+   RA  L EA
Sbjct: 350 GVVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEA 409

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
             V ++M+  G + D VTY  LID + K G +  A  ++ KM    ++P+  TY+ + + 
Sbjct: 410 ERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDG 469

Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPD 534
           L K G + AA++L  EM ++G   N+ TYN +I    KA N + A++   DM  AG +PD
Sbjct: 470 LCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPD 529

Query: 535 KVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYE 594
             TY+ ++  L     LD A ++  EM  K   P    Y +L++ +  +G V       E
Sbjct: 530 VYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLE 589

Query: 595 AMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEAR 654
            ML+  + PN  T NSL+  +     +     + +GML+  + P+  TY +L+    +AR
Sbjct: 590 WMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQEVVPNENTYNILIKGHCKAR 649

Query: 655 SPYDMGFCHELMAVSG 670
           +  +  + H  M   G
Sbjct: 650 NMKEALYFHSEMIEKG 665



 Score =  128 bits (322), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 84/309 (27%), Positives = 147/309 (47%), Gaps = 1/309 (0%)

Query: 339 DHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTY 398
           D   A  +F+ ++++ G   D  TYT ++  L RA +     ++L +M   G   + VTY
Sbjct: 370 DLAAARNWFDEMQKR-GLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTY 428

Query: 399 NRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQA 458
             LI  Y +   + EA  V  +M      P+ VTY  L D   K G +  A ++  +M +
Sbjct: 429 TVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCS 488

Query: 459 AGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQS 518
            GL  + FTY+ +IN L KAG+L+ A +   +M   G  P++ TY  +I    +++    
Sbjct: 489 KGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDR 548

Query: 519 ALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVD 578
           A  L ++M + G +P  VTY+++M      G ++  + +   M  KN  P+   Y  L+ 
Sbjct: 549 AHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMK 608

Query: 579 LWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKP 638
            +    N++   E Y+ ML   + PN  T N L+    +   + +A +    M+  G + 
Sbjct: 609 QYCIEKNMKSTTEIYKGMLSQEVVPNENTYNILIKGHCKARNMKEALYFHSEMIEKGFRL 668

Query: 639 SLQTYTLLL 647
           +  +Y  L+
Sbjct: 669 TASSYNALI 677



 Score =  123 bits (308), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 88/304 (28%), Positives = 146/304 (48%), Gaps = 11/304 (3%)

Query: 359 DEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVF 418
           D  TY  MV       +     KLL +M   G + N V Y  +I        +++A+ V 
Sbjct: 284 DVVTYGIMVHGYCTLSELETAIKLLSEMAARGLELNPVAYTSVIALLCDEGQVSDAVRVV 343

Query: 419 KQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKA 478
           + M + G   D   + T++    + G L  A + + +MQ  GL+ D  TY+ +IN L +A
Sbjct: 344 EDMVMHGVVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRA 403

Query: 479 GHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTY 538
           G L+ A ++  EM ++G   + VTY ++I    K      A  ++  M      P+ VTY
Sbjct: 404 GELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTY 463

Query: 539 SIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQ 598
           + + + L   G +  A  +  EM  K    +   Y  L++   KAGN+ +A      M +
Sbjct: 464 TALSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDE 523

Query: 599 AGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYD 658
           AGL+P+V T  +++ A  +  +L  A+ LLQ ML+ G+KP++ TY +L++          
Sbjct: 524 AGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMN---------- 573

Query: 659 MGFC 662
            GFC
Sbjct: 574 -GFC 576



 Score =  122 bits (307), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 80/293 (27%), Positives = 142/293 (48%), Gaps = 3/293 (1%)

Query: 362 TYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQM 421
           +Y  ++  L  A +    ++L D+M      P+VVTY  ++H Y   + L  A+ +  +M
Sbjct: 255 SYNILLKALCTAGRIKDAHQLFDEM---ASPPDVVTYGIMVHGYCTLSELETAIKLLSEM 311

Query: 422 QVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHL 481
              G E + V Y ++I +    G +  A+ + + M   G+  D   ++ +++   + G L
Sbjct: 312 AARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDL 371

Query: 482 QAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIV 541
            AA   F EM  +G   + VTY  +I    +A   + A ++ ++M++ G + D VTY+++
Sbjct: 372 AAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVL 431

Query: 542 MEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGL 601
           ++     G + EA  V  +M +K   P+   Y  L D   K G+V  A E    M   GL
Sbjct: 432 IDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGL 491

Query: 602 RPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEAR 654
             N+ T NSL++   + G L  A   +  M   GLKP + TYT ++    +++
Sbjct: 492 ELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSK 544



 Score =  108 bits (271), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 68/237 (28%), Positives = 117/237 (49%), Gaps = 4/237 (1%)

Query: 362 TYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQM 421
           TYT +   L +     A N+LL +M   G + N+ TYN LI+   +A  L +A+     M
Sbjct: 462 TYTALSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDM 521

Query: 422 QVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHL 481
              G +PD  TY T+I    ++  LD A  + ++M   G+ P   TY+V++N    +G +
Sbjct: 522 DEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRV 581

Query: 482 QAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIV 541
           +   +L   M+ +   PN  TYN ++      +N +S  ++Y+ M +    P++ TY+I+
Sbjct: 582 EGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQEVVPNENTYNIL 641

Query: 542 MEVLGHCGYLDEAEAVF--AEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAM 596
           ++  GHC   +  EA++  +EM  K +      Y  L+ L  K     +A   +E M
Sbjct: 642 IK--GHCKARNMKEALYFHSEMIEKGFRLTASSYNALIRLLNKKKKFTEARRLFEKM 696



 Score = 95.5 bits (236), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 59/202 (29%), Positives = 108/202 (53%), Gaps = 7/202 (3%)

Query: 446 LDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNI 505
           LD A+ +++++       +T +Y++++  L  AG ++ AHQLF EM +    P++VTY I
Sbjct: 238 LDEAVQLFQELP----EKNTCSYNILLKALCTAGRIKDAHQLFDEMASP---PDVVTYGI 290

Query: 506 MIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKN 565
           M+         ++A+KL  +M   G E + V Y+ V+ +L   G + +A  V  +M    
Sbjct: 291 MVHGYCTLSELETAIKLLSEMAARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHG 350

Query: 566 WVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAY 625
            V D  V+  ++  + + G++  A  W++ M + GL  +  T  +L++   R G+L +A 
Sbjct: 351 VVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAE 410

Query: 626 HLLQGMLNLGLKPSLQTYTLLL 647
            +LQ M + GL     TYT+L+
Sbjct: 411 RVLQEMEDKGLDVDAVTYTVLI 432



 Score = 65.1 bits (157), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 50/205 (24%), Positives = 79/205 (38%), Gaps = 35/205 (17%)

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVT--------------- 397
           +AG K D +TYTT++G L ++++    + LL +M+  G +P +VT               
Sbjct: 523 EAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVE 582

Query: 398 --------------------YNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLI 437
                               YN L+  Y     +    +++K M      P+  TY  LI
Sbjct: 583 GGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQEVVPNENTYNILI 642

Query: 438 DIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCI 497
             H KA  +  A+  + +M   G      +Y+ +I  L K      A +LF +M      
Sbjct: 643 KGHCKARNMKEALYFHSEMIEKGFRLTASSYNALIRLLNKKKKFTEARRLFEKMRKDRLT 702

Query: 498 PNLVTYNIMIALQAKARNYQSALKL 522
                YN  I L     N +S L L
Sbjct: 703 AEPDVYNFYIDLSFNEDNLESTLAL 727


>gi|125538899|gb|EAY85294.1| hypothetical protein OsI_06665 [Oryza sativa Indica Group]
          Length = 632

 Score =  149 bits (377), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 103/392 (26%), Positives = 182/392 (46%), Gaps = 40/392 (10%)

Query: 267 VSERFSKPS-REMKIPAGLAPFSRHFASTGNVVESVSRILRQWKWGPLAEEALGNTNYSM 325
           + + F  PS R     A L+P  R+  S   + E   RIL+ +KWGP AE AL      +
Sbjct: 31  IVQMFRTPSPRNEDAVAALSP--RYTNSVRVLDERFIRILKIFKWGPDAERALEVLMLRV 88

Query: 326 DAYQANQVLKQLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQ 385
           D +   +V+K      V + FF W  ++  ++HD  TY  ++  L    Q+G + K++ +
Sbjct: 89  DHWLVREVMKTDVGVNVKMQFFRWAAKKRNYQHDTSTYMALIHCLELVEQYGEMWKMIQE 148

Query: 386 MVRDG-CQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAG 444
           MVR   C    +  +++I   G A  + +A+ +F Q++   C+P            A+A 
Sbjct: 149 MVRSPICVVTPMELSQVIRMLGNAKMIGKAITIFYQIKARKCQPT-----------AQA- 196

Query: 445 FLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQG-CIPNLVTY 503
                                  Y+ +I  L   G  +  H+L+ EM N+G C P+ VTY
Sbjct: 197 -----------------------YNSMIIMLIHEGQYEKVHELYNEMSNEGHCQPDTVTY 233

Query: 504 NIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRR 563
           + +I+   K     SA++L  +M+  G +P    Y++++ +      +  A ++F EMR 
Sbjct: 234 SALISAFCKLGRQDSAIRLLNEMKENGMQPTAKIYTMIISLFFKLDNVHGALSLFEEMRY 293

Query: 564 KNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSD 623
               PD   Y  L+   GKAG + +A+ +Y  M + G +P+    N++++   + G+L D
Sbjct: 294 MYCRPDVFTYTELIRGLGKAGRIDEAYHFYHEMQREGCKPDTVVMNNMINFLGKAGRLDD 353

Query: 624 AYHLLQGMLNLGLKPSLQTYTLLLSCCTEARS 655
              L + M      P++ TY  ++    E++S
Sbjct: 354 GLKLFEEMGVSHCIPNVVTYNTIIKALFESKS 385



 Score =  148 bits (374), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 99/349 (28%), Positives = 160/349 (45%), Gaps = 38/349 (10%)

Query: 346 FFNWLRRQAGFKHDEHTYTTMVGILGR-ARQFGAINKLLDQMVRDGCQPNVVTYNRLIHS 404
            +N +  +   + D  TY+ ++    +  RQ  AI +LL++M  +G QP    Y  +I  
Sbjct: 216 LYNEMSNEGHCQPDTVTYSALISAFCKLGRQDSAI-RLLNEMKENGMQPTAKIYTMIISL 274

Query: 405 YGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPD 464
           + + + ++ AL +F++M+ + C PD  TY  LI    KAG +D A   Y +MQ  G  PD
Sbjct: 275 FFKLDNVHGALSLFEEMRYMYCRPDVFTYTELIRGLGKAGRIDEAYHFYHEMQREGCKPD 334

Query: 465 TFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIA--LQAKAR-------- 514
           T   + +IN LGKAG L    +LF EM    CIPN+VTYN +I    ++K+R        
Sbjct: 335 TVVMNNMINFLGKAGRLDDGLKLFEEMGVSHCIPNVVTYNTIIKALFESKSRVSEVFSWF 394

Query: 515 --------------------------NYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHC 548
                                       + A+ L  +M   GF P    Y  +++ LG  
Sbjct: 395 ERMKGSGISPSPFTYSILIDGFCKTNRIEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKA 454

Query: 549 GYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTC 608
              D A  +F E++         VY +++   GKAG +  A   ++ M + G  PNV   
Sbjct: 455 KRYDLACELFQELKENCGSSSARVYAVMIKHLGKAGRLDDAINLFDEMSKLGCTPNVYAY 514

Query: 609 NSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPY 657
           N+L+S   R   L +A   ++ M   G  P + +Y ++L+   +   P+
Sbjct: 515 NALMSGLARACMLDEALTTMRKMQEHGCLPDINSYNIILNGLAKTGGPH 563



 Score =  139 bits (351), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 92/314 (29%), Positives = 161/314 (51%), Gaps = 6/314 (1%)

Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLI 402
           AL  F  +R     + D  TYT ++  LG+A +         +M R+GC+P+ V  N +I
Sbjct: 284 ALSLFEEMRYMYC-RPDVFTYTELIRGLGKAGRIDEAYHFYHEMQREGCKPDTVVMNNMI 342

Query: 403 HSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLID--IHAKAGFLDVAMDMYKKMQAAG 460
           +  G+A  L++ L +F++M V  C P+ VTY T+I     +K+   +V    +++M+ +G
Sbjct: 343 NFLGKAGRLDDGLKLFEEMGVSHCIPNVVTYNTIIKALFESKSRVSEV-FSWFERMKGSG 401

Query: 461 LSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSAL 520
           +SP  FTYS++I+   K   ++ A  L  EM  +G  P    Y  +I    KA+ Y  A 
Sbjct: 402 ISPSPFTYSILIDGFCKTNRIEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLAC 461

Query: 521 KLYRDM-QNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDL 579
           +L++++ +N G    +V Y+++++ LG  G LD+A  +F EM +    P+   Y  L+  
Sbjct: 462 ELFQELKENCGSSSARV-YAVMIKHLGKAGRLDDAINLFDEMSKLGCTPNVYAYNALMSG 520

Query: 580 WGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPS 639
             +A  + +A      M + G  P++ + N +L+   + G    A  +L  M N  +KP 
Sbjct: 521 LARACMLDEALTTMRKMQEHGCLPDINSYNIILNGLAKTGGPHRAMEMLTNMKNSTIKPD 580

Query: 640 LQTYTLLLSCCTEA 653
             +Y  +LS  + A
Sbjct: 581 AVSYNTVLSALSHA 594



 Score =  133 bits (334), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 89/307 (28%), Positives = 146/307 (47%), Gaps = 2/307 (0%)

Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLI 402
           A  F++ ++R+ G K D      M+  LG+A +     KL ++M    C PNVVTYN +I
Sbjct: 319 AYHFYHEMQRE-GCKPDTVVMNNMINFLGKAGRLDDGLKLFEEMGVSHCIPNVVTYNTII 377

Query: 403 HS-YGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGL 461
            + +   + ++E    F++M+  G  P   TY  LID   K   ++ AM + ++M   G 
Sbjct: 378 KALFESKSRVSEVFSWFERMKGSGISPSPFTYSILIDGFCKTNRIEKAMMLLEEMDEKGF 437

Query: 462 SPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALK 521
            P    Y  +I+ LGKA     A +LF E+       +   Y +MI    KA     A+ 
Sbjct: 438 PPCPAAYCSLIDALGKAKRYDLACELFQELKENCGSSSARVYAVMIKHLGKAGRLDDAIN 497

Query: 522 LYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWG 581
           L+ +M   G  P+   Y+ +M  L     LDEA     +M+    +PD   Y ++++   
Sbjct: 498 LFDEMSKLGCTPNVYAYNALMSGLARACMLDEALTTMRKMQEHGCLPDINSYNIILNGLA 557

Query: 582 KAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQ 641
           K G   +A E    M  + ++P+  + N++LSA    G   +A  L++ M  LG +  L 
Sbjct: 558 KTGGPHRAMEMLTNMKNSTIKPDAVSYNTVLSALSHAGMFEEAAELMKEMNALGFEYDLI 617

Query: 642 TYTLLLS 648
           TY+ +L 
Sbjct: 618 TYSSILE 624



 Score =  109 bits (272), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 57/194 (29%), Positives = 105/194 (54%)

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
           + GF      Y +++  LG+A+++    +L  ++  +    +   Y  +I   G+A  L+
Sbjct: 434 EKGFPPCPAAYCSLIDALGKAKRYDLACELFQELKENCGSSSARVYAVMIKHLGKAGRLD 493

Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
           +A+++F +M  +GC P+   Y  L+   A+A  LD A+   +KMQ  G  PD  +Y++I+
Sbjct: 494 DAINLFDEMSKLGCTPNVYAYNALMSGLARACMLDEALTTMRKMQEHGCLPDINSYNIIL 553

Query: 473 NCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFE 532
           N L K G    A ++   M N    P+ V+YN +++  + A  ++ A +L ++M   GFE
Sbjct: 554 NGLAKTGGPHRAMEMLTNMKNSTIKPDAVSYNTVLSALSHAGMFEEAAELMKEMNALGFE 613

Query: 533 PDKVTYSIVMEVLG 546
            D +TYS ++E +G
Sbjct: 614 YDLITYSSILEAIG 627



 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 34/135 (25%), Positives = 67/135 (49%), Gaps = 1/135 (0%)

Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLI 402
           A+  F+ + +  G   + + Y  ++  L RA         + +M   GC P++ +YN ++
Sbjct: 495 AINLFDEMSK-LGCTPNVYAYNALMSGLARACMLDEALTTMRKMQEHGCLPDINSYNIIL 553

Query: 403 HSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLS 462
           +   +    + A+++   M+    +PD V+Y T++   + AG  + A ++ K+M A G  
Sbjct: 554 NGLAKTGGPHRAMEMLTNMKNSTIKPDAVSYNTVLSALSHAGMFEEAAELMKEMNALGFE 613

Query: 463 PDTFTYSVIINCLGK 477
            D  TYS I+  +GK
Sbjct: 614 YDLITYSSILEAIGK 628


>gi|255660838|gb|ACU25588.1| pentatricopeptide repeat-containing protein [Neosparton
           ephedroides]
          Length = 418

 Score =  149 bits (377), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 82/277 (29%), Positives = 150/277 (54%)

Query: 372 RARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRV 431
           + + F ++     +++  G   ++  +N L+H + +   +  A  VF ++   G  P  V
Sbjct: 113 KLKYFKSVWGFYKEILECGYPASLYFFNILMHRFCKEGEMRLAQSVFDEITKWGLRPSVV 172

Query: 432 TYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEM 491
           ++ TL++ + + G LD    +   M  +G+ PD +TYSV+IN L K   +  A++LF EM
Sbjct: 173 SFNTLMNGYIRLGDLDEGFRLKSAMHGSGIQPDVYTYSVLINGLCKESKMNDANELFDEM 232

Query: 492 VNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYL 551
           +  G +PN VT+  +I    K  +   A++ Y++M   GF PD +TY+ ++  L   G L
Sbjct: 233 IGNGLVPNGVTFTTLIDGHCKTGSIDLAMEAYKEMLRQGFSPDLITYNTLIYGLCKEGDL 292

Query: 552 DEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSL 611
            +A+ +  EM  K   PD+  Y  L+D   K G++  A+++ + M++  +R +     +L
Sbjct: 293 KQAQDLIDEMSMKGLKPDKITYTTLIDGSCKEGDLETAFKYKKRMIKENIRLDDVAYTAL 352

Query: 612 LSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
           +S   R GQ   A  +L+ ML++GLKP   TYT++++
Sbjct: 353 ISGLCREGQSVGAEKMLREMLSVGLKPDNGTYTMIIN 389



 Score =  123 bits (308), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 75/227 (33%), Positives = 117/227 (51%)

Query: 381 KLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIH 440
           +L   M   G QP+V TY+ LI+   + + +N+A ++F +M   G  P+ VT+ TLID H
Sbjct: 192 RLKSAMHGSGIQPDVYTYSVLINGLCKESKMNDANELFDEMIGNGLVPNGVTFTTLIDGH 251

Query: 441 AKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNL 500
            K G +D+AM+ YK+M   G SPD  TY+ +I  L K G L+ A  L  EM  +G  P+ 
Sbjct: 252 CKTGSIDLAMEAYKEMLRQGFSPDLITYNTLIYGLCKEGDLKQAQDLIDEMSMKGLKPDK 311

Query: 501 VTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAE 560
           +TY  +I    K  + ++A K  + M       D V Y+ ++  L   G    AE +  E
Sbjct: 312 ITYTTLIDGSCKEGDLETAFKYKKRMIKENIRLDDVAYTALISGLCREGQSVGAEKMLRE 371

Query: 561 MRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPT 607
           M      PD   Y ++++ + K G+V+   +  + M + G  P V T
Sbjct: 372 MLSVGLKPDNGTYTMIINEFCKKGDVKMGSKLLKEMQRDGHVPCVVT 418



 Score =  110 bits (276), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 63/215 (29%), Positives = 109/215 (50%)

Query: 354 AGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNE 413
           +G + D +TY+ ++  L +  +    N+L D+M+ +G  PN VT+  LI  + +   ++ 
Sbjct: 200 SGIQPDVYTYSVLINGLCKESKMNDANELFDEMIGNGLVPNGVTFTTLIDGHCKTGSIDL 259

Query: 414 ALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIIN 473
           A++ +K+M   G  PD +TY TLI    K G L  A D+  +M   GL PD  TY+ +I+
Sbjct: 260 AMEAYKEMLRQGFSPDLITYNTLIYGLCKEGDLKQAQDLIDEMSMKGLKPDKITYTTLID 319

Query: 474 CLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEP 533
              K G L+ A +    M+ +    + V Y  +I+   +      A K+ R+M + G +P
Sbjct: 320 GSCKEGDLETAFKYKKRMIKENIRLDDVAYTALISGLCREGQSVGAEKMLREMLSVGLKP 379

Query: 534 DKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVP 568
           D  TY++++      G +     +  EM+R   VP
Sbjct: 380 DNGTYTMIINEFCKKGDVKMGSKLLKEMQRDGHVP 414



 Score =  107 bits (268), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 73/310 (23%), Positives = 141/310 (45%), Gaps = 18/310 (5%)

Query: 356 FKHDEHTYTTMVGILGRARQFGAINKLLDQMV------------------RDGCQPNVVT 397
           F+H  H+Y TM+  L   +       L+  +V                  +   + +V  
Sbjct: 9   FRHTLHSYCTMIHFLCTHQMLPEAKNLIQIVVSRKGKDSASAVFEAILEAKGAQRSDVYV 68

Query: 398 YNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQ 457
           ++ LI +Y  + +L++AL+ F+  +         T   +++   K  +       YK++ 
Sbjct: 69  FSGLITAYLESGFLHDALECFRLTREHKFWVPFDTCRKVLEHFMKLKYFKSVWGFYKEIL 128

Query: 458 AAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQ 517
             G     + ++++++   K G ++ A  +F E+   G  P++V++N ++    +  +  
Sbjct: 129 ECGYPASLYFFNILMHRFCKEGEMRLAQSVFDEITKWGLRPSVVSFNTLMNGYIRLGDLD 188

Query: 518 SALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLV 577
              +L   M  +G +PD  TYS+++  L     +++A  +F EM     VP+   +  L+
Sbjct: 189 EGFRLKSAMHGSGIQPDVYTYSVLINGLCKESKMNDANELFDEMIGNGLVPNGVTFTTLI 248

Query: 578 DLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLK 637
           D   K G++  A E Y+ ML+ G  P++ T N+L+    + G L  A  L+  M   GLK
Sbjct: 249 DGHCKTGSIDLAMEAYKEMLRQGFSPDLITYNTLIYGLCKEGDLKQAQDLIDEMSMKGLK 308

Query: 638 PSLQTYTLLL 647
           P   TYT L+
Sbjct: 309 PDKITYTTLI 318



 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 65/279 (23%), Positives = 128/279 (45%), Gaps = 5/279 (1%)

Query: 397 TYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKM 456
           T  +++  + +  Y       +K++   G       +  L+    K G + +A  ++ ++
Sbjct: 103 TCRKVLEHFMKLKYFKSVWGFYKEILECGYPASLYFFNILMHRFCKEGEMRLAQSVFDEI 162

Query: 457 QAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNY 516
              GL P   +++ ++N   + G L    +L   M   G  P++ TY+++I    K    
Sbjct: 163 TKWGLRPSVVSFNTLMNGYIRLGDLDEGFRLKSAMHGSGIQPDVYTYSVLINGLCKESKM 222

Query: 517 QSALKLYRDMQNAGFEPDKVTYSIVMEVLGHC--GYLDEAEAVFAEMRRKNWVPDEPVYG 574
             A +L+ +M   G  P+ VT++ +++  GHC  G +D A   + EM R+ + PD   Y 
Sbjct: 223 NDANELFDEMIGNGLVPNGVTFTTLID--GHCKTGSIDLAMEAYKEMLRQGFSPDLITYN 280

Query: 575 LLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNL 634
            L+    K G++++A +  + M   GL+P+  T  +L+    + G L  A+   + M+  
Sbjct: 281 TLIYGLCKEGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGSCKEGDLETAFKYKKRMIKE 340

Query: 635 GLKPSLQTYTLLLS-CCTEARSPYDMGFCHELMAVSGHP 672
            ++     YT L+S  C E +S        E+++V   P
Sbjct: 341 NIRLDDVAYTALISGLCREGQSVGAEKMLREMLSVGLKP 379



 Score = 78.2 bits (191), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 52/179 (29%), Positives = 85/179 (47%), Gaps = 41/179 (22%)

Query: 362 TYTTMVGILGRARQFGAINKLLD---QMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVF 418
           T+TT++   G  +  G+I+  ++   +M+R G  P+++TYN LI+   +   L +A D+ 
Sbjct: 243 TFTTLID--GHCKT-GSIDLAMEAYKEMLRQGFSPDLITYNTLIYGLCKEGDLKQAQDLI 299

Query: 419 KQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMD--------------------------- 451
            +M + G +PD++TY TLID   K G L+ A                             
Sbjct: 300 DEMSMKGLKPDKITYTTLIDGSCKEGDLETAFKYKKRMIKENIRLDDVAYTALISGLCRE 359

Query: 452 --------MYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVT 502
                   M ++M + GL PD  TY++IIN   K G ++   +L  EM   G +P +VT
Sbjct: 360 GQSVGAEKMLREMLSVGLKPDNGTYTMIINEFCKKGDVKMGSKLLKEMQRDGHVPCVVT 418


>gi|449520325|ref|XP_004167184.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Cucumis sativus]
          Length = 605

 Score =  149 bits (377), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 103/398 (25%), Positives = 185/398 (46%), Gaps = 39/398 (9%)

Query: 351 RRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANY 410
           R +   K +  TY  +V  L +  +     +L ++M   G  P++++YN LIH +  A  
Sbjct: 206 RYEINCKPNVITYNIIVDGLCKVGREDEAKQLFEEMKTQGMIPSIISYNSLIHGFCCAGK 265

Query: 411 LNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSV 470
             E+  +  +M   G +PD VT+  LID   K G +  A  +   M  +G+ PD  TY+ 
Sbjct: 266 WEESKRLLDEMLDQGLQPDMVTFNVLIDTLCKEGKVIEAKKLLGVMIESGIVPDLVTYNS 325

Query: 471 IINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAG 530
           +I      G L +A +LF  M ++GC P++++YN++I   +K    + A+KLY +M   G
Sbjct: 326 LIEGFCMVGDLNSARELFVSMPSKGCEPDVISYNVLINGYSKTLKVEEAMKLYNEMLLVG 385

Query: 531 FEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAW 590
             P+ +TY  +++ +   G +D+A+ +F+ M+      +   YG+ +D   K   + +A 
Sbjct: 386 KRPNVITYDSLLKGIFLAGKVDDAKKLFSVMKAHGIAENSYTYGIFLDGLCKNDCLFEAM 445

Query: 591 EWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCC 650
           + +  +  +  +  +   N L+    + G+L  A+ L + + N G +P++ TYT+++   
Sbjct: 446 KLFTELKSSNFKLEIENLNCLIDGLCKAGKLETAWELFEKLSNEGHEPNVVTYTIMIH-- 503

Query: 651 TEARSPYDMGFCHELMAVSGHPAHMFLLSMPSPG--PDGQNVRDHVGSFLEMMHSEDRES 708
                    GFC E        A++ +  M + G  PD       +  F E    E+   
Sbjct: 504 ---------GFCREGQV---DKANVLIQKMEANGCTPDIITYNTLMRGFYESNKLEE--- 548

Query: 709 KRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAV 746
                  VV  LH+              AQK+V PDA+
Sbjct: 549 -------VVQLLHR-------------MAQKDVSPDAI 566



 Score =  132 bits (331), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 88/320 (27%), Positives = 151/320 (47%), Gaps = 19/320 (5%)

Query: 341 TVALGFFNWLRRQ------AGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPN 394
           T AL FF+ + R       + F H       ++  L + + +  +  L +QM   G   +
Sbjct: 51  THALHFFHLMMRSTPTPSLSSFNH-------LLSGLAKIKHYSQVFSLYNQMRLSGLSSD 103

Query: 395 VVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYK 454
             T N L++     N L E    F  +   G  P+ VTY TLI        +  A  ++ 
Sbjct: 104 RCTLNILLNCLCNVNRLREGFAAFAGILRRGYSPNIVTYNTLIKGLCMEHRISEATRLFL 163

Query: 455 KMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQ------GCIPNLVTYNIMIA 508
           +MQ  G +PD  TY  +I  L   G++  A +L  EM+N        C PN++TYNI++ 
Sbjct: 164 RMQKLGCTPDVVTYGTLIKGLCGTGNINIALKLHQEMLNDISRYEINCKPNVITYNIIVD 223

Query: 509 LQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVP 568
              K      A +L+ +M+  G  P  ++Y+ ++      G  +E++ +  EM  +   P
Sbjct: 224 GLCKVGREDEAKQLFEEMKTQGMIPSIISYNSLIHGFCCAGKWEESKRLLDEMLDQGLQP 283

Query: 569 DEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLL 628
           D   + +L+D   K G V +A +    M+++G+ P++ T NSL+  F  VG L+ A  L 
Sbjct: 284 DMVTFNVLIDTLCKEGKVIEAKKLLGVMIESGIVPDLVTYNSLIEGFCMVGDLNSARELF 343

Query: 629 QGMLNLGLKPSLQTYTLLLS 648
             M + G +P + +Y +L++
Sbjct: 344 VSMPSKGCEPDVISYNVLIN 363



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 86/309 (27%), Positives = 145/309 (46%), Gaps = 22/309 (7%)

Query: 386 MVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGF 445
           M+R    P++ ++N L+    +  + ++   ++ QM++ G   DR T   L++       
Sbjct: 60  MMRSTPTPSLSSFNHLLSGLAKIKHYSQVFSLYNQMRLSGLSSDRCTLNILLNCLCNVNR 119

Query: 446 LDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNI 505
           L      +  +   G SP+  TY+ +I  L     +  A +LF  M   GC P++VTY  
Sbjct: 120 LREGFAAFAGILRRGYSPNIVTYNTLIKGLCMEHRISEATRLFLRMQKLGCTPDVVTYGT 179

Query: 506 MIALQAKARNYQSALKLYRDMQN------AGFEPDKVTYSIVMEVLGHCGYLDEAEAVFA 559
           +I       N   ALKL+++M N         +P+ +TY+I+++ L   G  DEA+ +F 
Sbjct: 180 LIKGLCGTGNINIALKLHQEMLNDISRYEINCKPNVITYNIIVDGLCKVGREDEAKQLFE 239

Query: 560 EMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVG 619
           EM+ +  +P    Y  L+  +  AG   ++    + ML  GL+P++ T N L+    + G
Sbjct: 240 EMKTQGMIPSIISYNSLIHGFCCAGKWEESKRLLDEMLDQGLQPDMVTFNVLIDTLCKEG 299

Query: 620 QLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGFCHELMAVSGHPAHMFLLS 679
           ++ +A  LL  M+  G+ P L TY  L+            GFC   M    + A    +S
Sbjct: 300 KVIEAKKLLGVMIESGIVPDLVTYNSLIE-----------GFC---MVGDLNSARELFVS 345

Query: 680 MPSPG--PD 686
           MPS G  PD
Sbjct: 346 MPSKGCEPD 354



 Score =  126 bits (317), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 78/293 (26%), Positives = 142/293 (48%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           G + D  T+  ++  L +  +     KLL  M+  G  P++VTYN LI  +     LN A
Sbjct: 280 GLQPDMVTFNVLIDTLCKEGKVIEAKKLLGVMIESGIVPDLVTYNSLIEGFCMVGDLNSA 339

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
            ++F  M   GCEPD ++Y  LI+ ++K   ++ AM +Y +M   G  P+  TY  ++  
Sbjct: 340 RELFVSMPSKGCEPDVISYNVLINGYSKTLKVEEAMKLYNEMLLVGKRPNVITYDSLLKG 399

Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPD 534
           +  AG +  A +LF  M   G   N  TY I +    K      A+KL+ +++++ F+ +
Sbjct: 400 IFLAGKVDDAKKLFSVMKAHGIAENSYTYGIFLDGLCKNDCLFEAMKLFTELKSSNFKLE 459

Query: 535 KVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYE 594
               + +++ L   G L+ A  +F ++  +   P+   Y +++  + + G V KA    +
Sbjct: 460 IENLNCLIDGLCKAGKLETAWELFEKLSNEGHEPNVVTYTIMIHGFCREGQVDKANVLIQ 519

Query: 595 AMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
            M   G  P++ T N+L+  F    +L +   LL  M    + P   T ++++
Sbjct: 520 KMEANGCTPDIITYNTLMRGFYESNKLEEVVQLLHRMAQKDVSPDAITCSIVV 572



 Score =  121 bits (303), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 70/276 (25%), Positives = 138/276 (50%)

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
           ++G   D  TY +++          +  +L   M   GC+P+V++YN LI+ Y +   + 
Sbjct: 313 ESGIVPDLVTYNSLIEGFCMVGDLNSARELFVSMPSKGCEPDVISYNVLINGYSKTLKVE 372

Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
           EA+ ++ +M +VG  P+ +TY +L+     AG +D A  ++  M+A G++ +++TY + +
Sbjct: 373 EAMKLYNEMLLVGKRPNVITYDSLLKGIFLAGKVDDAKKLFSVMKAHGIAENSYTYGIFL 432

Query: 473 NCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFE 532
           + L K   L  A +LF E+ +      +   N +I    KA   ++A +L+  + N G E
Sbjct: 433 DGLCKNDCLFEAMKLFTELKSSNFKLEIENLNCLIDGLCKAGKLETAWELFEKLSNEGHE 492

Query: 533 PDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEW 592
           P+ VTY+I++      G +D+A  +  +M      PD   Y  L+  + ++  + +  + 
Sbjct: 493 PNVVTYTIMIHGFCREGQVDKANVLIQKMEANGCTPDIITYNTLMRGFYESNKLEEVVQL 552

Query: 593 YEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLL 628
              M Q  + P+  TC+ ++    +  +  +  HLL
Sbjct: 553 LHRMAQKDVSPDAITCSIVVDMLSKDEKYQECLHLL 588



 Score =  107 bits (268), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 71/248 (28%), Positives = 118/248 (47%), Gaps = 7/248 (2%)

Query: 414 ALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIIN 473
           AL  F  M      P   ++  L+   AK         +Y +M+ +GLS D  T ++++N
Sbjct: 53  ALHFFHLMMRSTPTPSLSSFNHLLSGLAKIKHYSQVFSLYNQMRLSGLSSDRCTLNILLN 112

Query: 474 CLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEP 533
           CL     L+     F  ++ +G  PN+VTYN +I           A +L+  MQ  G  P
Sbjct: 113 CLCNVNRLREGFAAFAGILRRGYSPNIVTYNTLIKGLCMEHRISEATRLFLRMQKLGCTP 172

Query: 534 DKVTYSIVMEVLGHCGYLDEAEAVFAEMRRK------NWVPDEPVYGLLVDLWGKAGNVR 587
           D VTY  +++ L   G ++ A  +  EM         N  P+   Y ++VD   K G   
Sbjct: 173 DVVTYGTLIKGLCGTGNINIALKLHQEMLNDISRYEINCKPNVITYNIIVDGLCKVGRED 232

Query: 588 KAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
           +A + +E M   G+ P++ + NSL+  F   G+  ++  LL  ML+ GL+P + T+ +L+
Sbjct: 233 EAKQLFEEMKTQGMIPSIISYNSLIHGFCCAGKWEESKRLLDEMLDQGLQPDMVTFNVLI 292

Query: 648 -SCCTEAR 654
            + C E +
Sbjct: 293 DTLCKEGK 300



 Score = 70.1 bits (170), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 39/146 (26%), Positives = 75/146 (51%), Gaps = 1/146 (0%)

Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLI 402
           A+  F  L+  + FK +      ++  L +A +     +L +++  +G +PNVVTY  +I
Sbjct: 444 AMKLFTELK-SSNFKLEIENLNCLIDGLCKAGKLETAWELFEKLSNEGHEPNVVTYTIMI 502

Query: 403 HSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLS 462
           H + R   +++A  + ++M+  GC PD +TY TL+    ++  L+  + +  +M    +S
Sbjct: 503 HGFCREGQVDKANVLIQKMEANGCTPDIITYNTLMRGFYESNKLEEVVQLLHRMAQKDVS 562

Query: 463 PDTFTYSVIINCLGKAGHLQAAHQLF 488
           PD  T S++++ L K    Q    L 
Sbjct: 563 PDAITCSIVVDMLSKDEKYQECLHLL 588


>gi|414591648|tpg|DAA42219.1| TPA: PPR-814b [Zea mays]
          Length = 827

 Score =  149 bits (377), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 88/295 (29%), Positives = 147/295 (49%)

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
           Q G   D  TY ++V  L +AR        L QMV     PN  TYN LI+ Y       
Sbjct: 260 QRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQWK 319

Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
           EA+ VFK+M+     PD VT   L+    K G +  A D++  M   G +PD F+Y++++
Sbjct: 320 EAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIML 379

Query: 473 NCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFE 532
           N     G L     LF  M+  G  P+  T+N++I   A       A+ ++ +M++ G +
Sbjct: 380 NGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVK 439

Query: 533 PDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEW 592
           PD VTY  V+  L   G +D+A   F +M  +   PD+  Y  L+  +   G++ KA E 
Sbjct: 440 PDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKEL 499

Query: 593 YEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
              ++  G+  ++   +S+++   ++G++ DA ++    +N+GL P    Y++L+
Sbjct: 500 ISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYSMLM 554



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 125/490 (25%), Positives = 226/490 (46%), Gaps = 38/490 (7%)

Query: 342 VALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRL 401
           +AL FF  L R     +       + G     R   A++ LL +    GC P+V +Y+ L
Sbjct: 142 LALAFFGQLLRTGLRVNIIIANHLLEGFCEAKRTDEALDILLHRTPELGCVPDVFSYSIL 201

Query: 402 IHSYGRANYLNEALDVFKQMQVVG--CEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAA 459
           + S        +A D+ + M   G  C P+ V Y T+ID   K G ++ A D++K+M   
Sbjct: 202 LKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNTVIDGFFKEGDVNKACDLFKEMVQR 261

Query: 460 GLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSA 519
           G+ PD  TY+ +++ L KA  +  A     +MVN+  +PN  TYN +I   +    ++ A
Sbjct: 262 GIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEA 321

Query: 520 LKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDL 579
           ++++++M+     PD VT S++M  L   G + EA  VF  M  K   PD   Y ++++ 
Sbjct: 322 VRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNG 381

Query: 580 WGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPS 639
           +   G +    + ++ ML  G+ P+  T N L+ A+   G L  A  +   M + G+KP 
Sbjct: 382 YATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPD 441

Query: 640 LQTY-TLLLSCCTEARSPYDMGFCHELMAVSGHP---AHMFLLSMPSPGPDGQNVRDHVG 695
           + TY T++ + C   +    M   ++++     P   A+  L+         Q    H G
Sbjct: 442 VVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLI---------QGFCTH-G 491

Query: 696 SFLEMMHSEDRESKRGL------VDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAVKEK 749
           S L+           G+        ++++ L K G   +A +++++     ++PDAV   
Sbjct: 492 SLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVV-- 549

Query: 750 GMSYWLINLHVMSDGTAVIA-LSRTLAWFRKQMLISGVGPSRI---DIVTGWGRRSRV-T 804
                     ++ DG  ++  + + L  F   M+ +G+ P+ +    +V G+ +  R+  
Sbjct: 550 --------YSMLMDGYCLVGKMEKALRVF-DAMVSAGIEPNVVVYCTLVNGYCKIGRIDE 600

Query: 805 GTSLVRQAVQ 814
           G SL R+ +Q
Sbjct: 601 GLSLFREMLQ 610



 Score =  131 bits (329), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 81/291 (27%), Positives = 141/291 (48%), Gaps = 4/291 (1%)

Query: 359 DEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVF 418
           D  +Y  M+           +  L D M+ DG  P+  T+N LI +Y     L++A+ +F
Sbjct: 371 DVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIF 430

Query: 419 KQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKA 478
            +M+  G +PD VTY T+I    + G +D AM+ + +M   G++PD + Y+ +I      
Sbjct: 431 NEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTH 490

Query: 479 GHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTY 538
           G L  A +L  E++N G   ++V ++ +I    K      A  ++    N G  PD V Y
Sbjct: 491 GSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVY 550

Query: 539 SIVMEVLGHC--GYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAM 596
           S++M+  G+C  G +++A  VF  M      P+  VY  LV+ + K G + +    +  M
Sbjct: 551 SMLMD--GYCLVGKMEKALRVFDAMVSAGIEPNVVVYCTLVNGYCKIGRIDEGLSLFREM 608

Query: 597 LQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
           LQ G++P+    + ++    + G+   A      M   G+   + TY ++L
Sbjct: 609 LQRGIKPSTILYSIIIDGLFQAGRTVPAKMKFHEMTESGIAMDICTYNIVL 659



 Score =  127 bits (319), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 72/270 (26%), Positives = 136/270 (50%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           G   D   +++++  L +  +      + D  V  G  P+ V Y+ L+  Y     + +A
Sbjct: 507 GMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYSMLMDGYCLVGKMEKA 566

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
           L VF  M   G EP+ V YCTL++ + K G +D  + ++++M   G+ P T  YS+II+ 
Sbjct: 567 LRVFDAMVSAGIEPNVVVYCTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDG 626

Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPD 534
           L +AG    A   F EM   G   ++ TYNI++    K R +  A+ L+++++    + +
Sbjct: 627 LFQAGRTVPAKMKFHEMTESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKIN 686

Query: 535 KVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYE 594
            +T + +++ +     ++EA+ +FA + R   VP+   Y +++    K G V +A + + 
Sbjct: 687 IITLNTMIDGMFQTRRVEEAKDLFASISRSRLVPNVVTYSIMITNLIKEGLVEEAEDMFS 746

Query: 595 AMLQAGLRPNVPTCNSLLSAFLRVGQLSDA 624
           +M  AG  PN    N ++   L+  ++  A
Sbjct: 747 SMQNAGCEPNSRLLNHVVRELLKKNEIVRA 776



 Score =  114 bits (285), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 74/295 (25%), Positives = 140/295 (47%), Gaps = 4/295 (1%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           G   D +T+  ++              + ++M   G +P+VVTY  +I +  R   +++A
Sbjct: 402 GIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDA 461

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
           ++ F QM   G  PD+  Y  LI      G L  A ++  ++   G+  D   +S IIN 
Sbjct: 462 MEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINN 521

Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPD 534
           L K G +  A  +F   VN G  P+ V Y++++         + AL+++  M +AG EP+
Sbjct: 522 LCKLGRVMDAQNIFDLTVNVGLHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPN 581

Query: 535 KVTYSIVMEVLGHC--GYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEW 592
            V Y  ++   G+C  G +DE  ++F EM ++   P   +Y +++D   +AG    A   
Sbjct: 582 VVVYCTLVN--GYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFQAGRTVPAKMK 639

Query: 593 YEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
           +  M ++G+  ++ T N +L    +     +A  L + +  + +K ++ T   ++
Sbjct: 640 FHEMTESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMI 694



 Score =  110 bits (274), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 72/298 (24%), Positives = 146/298 (48%), Gaps = 3/298 (1%)

Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLI 402
           A+  FN +  Q G   D++ Y  ++             +L+ +++ +G   ++V ++ +I
Sbjct: 461 AMEKFNQMIDQ-GVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSII 519

Query: 403 HSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLS 462
           ++  +   + +A ++F     VG  PD V Y  L+D +   G ++ A+ ++  M +AG+ 
Sbjct: 520 NNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIE 579

Query: 463 PDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMI-ALQAKARNYQSALK 521
           P+   Y  ++N   K G +     LF EM+ +G  P+ + Y+I+I  L    R   + +K
Sbjct: 580 PNVVVYCTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFQAGRTVPAKMK 639

Query: 522 LYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWG 581
            + +M  +G   D  TY+IV+  L      DEA  +F E+R  N   +      ++D   
Sbjct: 640 -FHEMTESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIDGMF 698

Query: 582 KAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPS 639
           +   V +A + + ++ ++ L PNV T + +++  ++ G + +A  +   M N G +P+
Sbjct: 699 QTRRVEEAKDLFASISRSRLVPNVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPN 756



 Score =  108 bits (271), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 78/326 (23%), Positives = 150/326 (46%), Gaps = 4/326 (1%)

Query: 326 DAYQANQVLKQLQDHTV---ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKL 382
           D Y  N ++K   +  +   A+  FN +R   G K D  TY T++  L R  +     + 
Sbjct: 406 DFYTFNVLIKAYANCGMLDKAMIIFNEMRDH-GVKPDVVTYRTVIAALCRIGKMDDAMEK 464

Query: 383 LDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAK 442
            +QM+  G  P+   YN LI  +     L +A ++  ++   G   D V + ++I+   K
Sbjct: 465 FNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCK 524

Query: 443 AGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVT 502
            G +  A +++      GL PD   YS++++     G ++ A ++F  MV+ G  PN+V 
Sbjct: 525 LGRVMDAQNIFDLTVNVGLHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVV 584

Query: 503 YNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMR 562
           Y  ++    K       L L+R+M   G +P  + YSI+++ L   G    A+  F EM 
Sbjct: 585 YCTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFQAGRTVPAKMKFHEMT 644

Query: 563 RKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLS 622
                 D   Y +++    K     +A   ++ +    ++ N+ T N+++    +  ++ 
Sbjct: 645 ESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIDGMFQTRRVE 704

Query: 623 DAYHLLQGMLNLGLKPSLQTYTLLLS 648
           +A  L   +    L P++ TY+++++
Sbjct: 705 EAKDLFASISRSRLVPNVVTYSIMIT 730



 Score =  101 bits (251), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 79/324 (24%), Positives = 126/324 (38%), Gaps = 71/324 (21%)

Query: 361 HTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQ 420
           HTY  ++    RA +         Q++R G + N++  N L+  +  A   +EALD+   
Sbjct: 125 HTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLEGFCEAKRTDEALDI--- 181

Query: 421 MQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGH 480
                                          +  +    G  PD F+YS+++  L   G 
Sbjct: 182 -------------------------------LLHRTPELGCVPDVFSYSILLKSLCDQGK 210

Query: 481 LQAAHQLFCEMVNQG--CIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTY 538
              A  L   M   G  C PN+V YN +I    K  +   A  L+++M   G  PD VTY
Sbjct: 211 SGQADDLLRMMAEGGAVCSPNVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTY 270

Query: 539 SIVMEVLGHCGYLDEAEA-----------------------------------VFAEMRR 563
           + V+  L     +D+AEA                                   VF EMRR
Sbjct: 271 NSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRR 330

Query: 564 KNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSD 623
            + +PD     +L+    K G +++A + ++ M   G  P+V + N +L+ +   G L D
Sbjct: 331 HSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVD 390

Query: 624 AYHLLQGMLNLGLKPSLQTYTLLL 647
              L   ML  G+ P   T+ +L+
Sbjct: 391 MTDLFDLMLGDGIAPDFYTFNVLI 414



 Score = 89.7 bits (221), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 62/250 (24%), Positives = 112/250 (44%), Gaps = 35/250 (14%)

Query: 381 KLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLID-- 438
           ++ D MV  G +PNVV Y  L++ Y +   ++E L +F++M   G +P  + Y  +ID  
Sbjct: 568 RVFDAMVSAGIEPNVVVYCTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGL 627

Query: 439 ------IHAKAGF---------------------------LDVAMDMYKKMQAAGLSPDT 465
                 + AK  F                            D A+ ++K+++A  +  + 
Sbjct: 628 FQAGRTVPAKMKFHEMTESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINI 687

Query: 466 FTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRD 525
            T + +I+ + +   ++ A  LF  +     +PN+VTY+IMI    K    + A  ++  
Sbjct: 688 ITLNTMIDGMFQTRRVEEAKDLFASISRSRLVPNVVTYSIMITNLIKEGLVEEAEDMFSS 747

Query: 526 MQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGN 585
           MQNAG EP+    + V+  L     +  A A  +++  +N+  +     LLVDL+   G 
Sbjct: 748 MQNAGCEPNSRLLNHVVRELLKKNEIVRAGAYLSKIDERNFSLEHLTAMLLVDLFSSKGT 807

Query: 586 VRKAWEWYEA 595
            R+   +  A
Sbjct: 808 CREQIRFLPA 817



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 51/190 (26%), Positives = 96/190 (50%), Gaps = 3/190 (1%)

Query: 461 LSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSAL 520
           LSP + TY+++++C  +A   + A   F +++  G   N++  N ++    +A+    AL
Sbjct: 120 LSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLEGFCEAKRTDEAL 179

Query: 521 K-LYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWV--PDEPVYGLLV 577
             L       G  PD  +YSI+++ L   G   +A+ +   M     V  P+   Y  ++
Sbjct: 180 DILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNTVI 239

Query: 578 DLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLK 637
           D + K G+V KA + ++ M+Q G+ P++ T NS++ A  +   +  A   L+ M+N  + 
Sbjct: 240 DGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVL 299

Query: 638 PSLQTYTLLL 647
           P+  TY  L+
Sbjct: 300 PNNWTYNNLI 309


>gi|326524964|dbj|BAK04418.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 565

 Score =  149 bits (377), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 99/352 (28%), Positives = 179/352 (50%), Gaps = 6/352 (1%)

Query: 299 ESVSRILRQWKWGPLAEEALGNTNYSMDAYQANQVLKQLQDHTV-ALGFFNWLRRQAGFK 357
           E V R+L      P    AL     S+      +VLK L +  + AL FF W  RQ GF 
Sbjct: 118 ERVCRVLSTLP-EPRVPAALDALGASVSPQLVAEVLKNLSNAGILALAFFRWAERQQGFV 176

Query: 358 HDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDV 417
           +   ++  ++  LG+ +QF  +  L++ M   G      T+  ++  Y RA  + EA++ 
Sbjct: 177 YTADSFHNLIEALGKIKQFRLVWSLVEAMRCRGLLSK-DTFRLIVRRYARARKVKEAVET 235

Query: 418 FKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAG-LSPDTFTYSVIINCLG 476
           F++M   G + D   Y  LID+ +K+  +  A  ++K+M+  G   PD  TY+V++   G
Sbjct: 236 FEKMAGFGLKADLSDYNWLIDVLSKSKQVKKAHAIFKEMKRNGRFVPDLKTYTVLMEGWG 295

Query: 477 KAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKV 536
               L     ++ EM++ G  P++V Y ++I+   K+     A+K++R+M+  G  P   
Sbjct: 296 HEKDLLMLKSVYQEMLDAGLQPDVVAYGMLISSFCKSGKCDEAIKVFREMETNGCMPSPH 355

Query: 537 TYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDE-PVYGLLVDLWGKAGNVRKAWEWYEA 595
            Y +++  LG    LDEA   F E+ + +  P E P    +V  + ++   + A++  + 
Sbjct: 356 VYCMLINGLGSEERLDEALKYF-ELSKASGFPMEVPTCNAVVGAYCRSSKFQHAFKMVDE 414

Query: 596 MLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
           M ++G+ PN  T + +L   ++  ++ +AY++ QGM   G +P L TYT+++
Sbjct: 415 MRKSGIGPNSRTYDIILHHLIKSQKIEEAYNVFQGMSKDGCEPQLNTYTMMV 466



 Score =  127 bits (319), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 84/339 (24%), Positives = 163/339 (48%), Gaps = 8/339 (2%)

Query: 289 RHFASTGNVVESVSRILRQWKWGPLAEEALGNTNYSMDAYQANQVLKQLQDHTVALGFFN 348
           R +A    V E+V    +   +G  A+  L + N+ +D    ++ +K+      A   F 
Sbjct: 221 RRYARARKVKEAVETFEKMAGFGLKAD--LSDYNWLIDVLSKSKQVKK------AHAIFK 272

Query: 349 WLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRA 408
            ++R   F  D  TYT ++   G  +    +  +  +M+  G QP+VV Y  LI S+ ++
Sbjct: 273 EMKRNGRFVPDLKTYTVLMEGWGHEKDLLMLKSVYQEMLDAGLQPDVVAYGMLISSFCKS 332

Query: 409 NYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTY 468
              +EA+ VF++M+  GC P    YC LI+       LD A+  ++  +A+G   +  T 
Sbjct: 333 GKCDEAIKVFREMETNGCMPSPHVYCMLINGLGSEERLDEALKYFELSKASGFPMEVPTC 392

Query: 469 SVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQN 528
           + ++    ++   Q A ++  EM   G  PN  TY+I++    K++  + A  +++ M  
Sbjct: 393 NAVVGAYCRSSKFQHAFKMVDEMRKSGIGPNSRTYDIILHHLIKSQKIEEAYNVFQGMSK 452

Query: 529 AGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRK 588
            G EP   TY++++ +      +D A  V+ +M+ K  +P   ++  L++       + +
Sbjct: 453 DGCEPQLNTYTMMVGMFCSNERVDVALKVWNQMKEKGVLPCMHMFSALINGLCFENRLEE 512

Query: 589 AWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHL 627
           A  +++ ML  G+RP     ++L  A +  G++S A  +
Sbjct: 513 ACAYFQEMLDRGIRPPGQLFSNLKEALIEGGRISLAQEM 551



 Score = 40.8 bits (94), Expect = 3.7,   Method: Compositional matrix adjust.
 Identities = 27/103 (26%), Positives = 46/103 (44%)

Query: 361 HTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQ 420
           +TYT MVG+     +     K+ +QM   G  P +  ++ LI+     N L EA   F++
Sbjct: 460 NTYTMMVGMFCSNERVDVALKVWNQMKEKGVLPCMHMFSALINGLCFENRLEEACAYFQE 519

Query: 421 MQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSP 463
           M   G  P    +  L +   + G + +A +M  K+     +P
Sbjct: 520 MLDRGIRPPGQLFSNLKEALIEGGRISLAQEMALKLDELRKTP 562


>gi|297806115|ref|XP_002870941.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297316778|gb|EFH47200.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 719

 Score =  149 bits (377), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 91/310 (29%), Positives = 162/310 (52%), Gaps = 7/310 (2%)

Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLI 402
           AL +FN ++ +AG   D   YT ++    R         L ++M++ GC  +VVTYN ++
Sbjct: 384 ALMYFNSVK-EAGLIPDNVIYTILIQGYCRKGMISEAMNLRNEMLQQGCAMDVVTYNTIL 442

Query: 403 HSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLS 462
           H   +   L EA  +F +M   G  PD  T   LID H K G L  AM+++KKM+   + 
Sbjct: 443 HGLCKRKMLGEADKLFNEMTERGLFPDSYTLTILIDGHCKLGNLQNAMELFKKMKEKRIK 502

Query: 463 PDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKL 522
            D  TY+ +++  GK G +  A +++ +MV++  +P  ++++I++       +   A ++
Sbjct: 503 LDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISFSILVNALCSKGHLSEAFRV 562

Query: 523 YRDMQNAGFEPDKVTYSIVMEVLGHC--GYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLW 580
           + +M +   +P  +  + +++  G+C  G   + E    +M  + +VPD   Y  L+  +
Sbjct: 563 WDEMISKSIKPTVMICNSMIK--GYCRSGNASDGEIFLEKMISEGFVPDCISYNTLIYGF 620

Query: 581 GKAGNVRKAWEWYEAM--LQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKP 638
            K  N+ KA+   + M   Q GL P+V T NS+L  F R  Q+ +A  +L+ M+  G+ P
Sbjct: 621 VKEENMSKAFGLVKKMEEKQGGLVPDVFTYNSILHGFCRENQMKEAEAVLRKMIERGVNP 680

Query: 639 SLQTYTLLLS 648
              TYT L++
Sbjct: 681 DRSTYTSLIN 690



 Score =  144 bits (364), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 93/337 (27%), Positives = 169/337 (50%), Gaps = 10/337 (2%)

Query: 317 ALGNTNYSMDAYQANQVLKQLQDH---TVALGFFNWLRRQAGFKHDEHTYTTMVGILGRA 373
           A+ +  +S   Y  N V+  L  H     A   F  + R +G   D  TY ++  ++   
Sbjct: 285 AMPSKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLR-SGLSPDSTTYRSL--LMEAC 341

Query: 374 RQFGAI---NKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDR 430
           ++  A+   N   D   RD   P++V ++ ++  + R+  L++AL  F  ++  G  PD 
Sbjct: 342 KKGDAVETENIFSDMRSRD-VVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDN 400

Query: 431 VTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCE 490
           V Y  LI  + + G +  AM++  +M   G + D  TY+ I++ L K   L  A +LF E
Sbjct: 401 VIYTILIQGYCRKGMISEAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNE 460

Query: 491 MVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGY 550
           M  +G  P+  T  I+I    K  N Q+A++L++ M+    + D VTY+ +++  G  G 
Sbjct: 461 MTERGLFPDSYTLTILIDGHCKLGNLQNAMELFKKMKEKRIKLDVVTYNTLLDGFGKVGD 520

Query: 551 LDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNS 610
           +D A+ ++A+M  K  +P    + +LV+     G++ +A+  ++ M+   ++P V  CNS
Sbjct: 521 IDTAKEIWADMVSKEILPTPISFSILVNALCSKGHLSEAFRVWDEMISKSIKPTVMICNS 580

Query: 611 LLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
           ++  + R G  SD    L+ M++ G  P   +Y  L+
Sbjct: 581 MIKGYCRSGNASDGEIFLEKMISEGFVPDCISYNTLI 617



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 116/481 (24%), Positives = 210/481 (43%), Gaps = 59/481 (12%)

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
           ++G   + +T   MV  L +  +   +   L ++   G  P++VTYN LI +Y     + 
Sbjct: 218 RSGVGVNVYTLNIMVNALCKDGKMEKVGTFLSEVQEKGVYPDIVTYNTLISAYSSQGLME 277

Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
           EA ++   M   G  P   TY T+I+   K G  + A +++ +M  +GLSPD+ TY  ++
Sbjct: 278 EAFELMHAMPSKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLL 337

Query: 473 NCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFE 532
               K G       +F +M ++  +P+LV ++ M++L  ++ N   AL  +  ++ AG  
Sbjct: 338 MEACKKGDAVETENIFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLI 397

Query: 533 PDKVTYSIVMEVLGHC-------------------------------------GYLDEAE 555
           PD V Y+I+++  G+C                                       L EA+
Sbjct: 398 PDNVIYTILIQ--GYCRKGMISEAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEAD 455

Query: 556 AVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAF 615
            +F EM  +   PD     +L+D   K GN++ A E ++ M +  ++ +V T N+LL  F
Sbjct: 456 KLFNEMTERGLFPDSYTLTILIDGHCKLGNLQNAMELFKKMKEKRIKLDVVTYNTLLDGF 515

Query: 616 LRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL-SCCTEARSPYDMGFCHELMAVSGHPAH 674
            +VG +  A  +   M++  + P+  ++++L+ + C++           E+++ S  P  
Sbjct: 516 GKVGDIDTAKEIWADMVSKEILPTPISFSILVNALCSKGHLSEAFRVWDEMISKSIKPTV 575

Query: 675 MFLLSMPSPGPDGQNVRDHVGSFLEMMHSE----DRESKRGLVDAVVDFLHKSGLKEEAG 730
           M   SM        N  D    FLE M SE    D  S   L+     F+ +  + +  G
Sbjct: 576 MICNSMIKGYCRSGNASDG-EIFLEKMISEGFVPDCISYNTLIYG---FVKEENMSKAFG 631

Query: 731 SVWEV-AAQKNVYPDAVKEKGMSYWLINLHVMSDGTAVIALSRTLAWFRKQMLISGVGPS 789
            V ++   Q  + PD      + +     + M +  AV+          ++M+  GV P 
Sbjct: 632 LVKKMEEKQGGLVPDVFTYNSILHGFCRENQMKEAEAVL----------RKMIERGVNPD 681

Query: 790 R 790
           R
Sbjct: 682 R 682



 Score =  132 bits (332), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 80/298 (26%), Positives = 139/298 (46%)

Query: 350 LRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRAN 409
           L R  G+         ++G L R        ++  ++ R G   NV T N ++++  +  
Sbjct: 180 LLRSKGYTVSIDACNALIGSLVRIGWVELAWRIYQEISRSGVGVNVYTLNIMVNALCKDG 239

Query: 410 YLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYS 469
            + +      ++Q  G  PD VTY TLI  ++  G ++ A ++   M + G SP  +TY+
Sbjct: 240 KMEKVGTFLSEVQEKGVYPDIVTYNTLISAYSSQGLMEEAFELMHAMPSKGFSPGVYTYN 299

Query: 470 VIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNA 529
            +IN L K G  + A ++F EM+  G  P+  TY  ++    K  +      ++ DM++ 
Sbjct: 300 TVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDAVETENIFSDMRSR 359

Query: 530 GFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKA 589
              PD V +S +M +    G LD+A   F  ++    +PD  +Y +L+  + + G + +A
Sbjct: 360 DVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISEA 419

Query: 590 WEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
                 MLQ G   +V T N++L    +   L +A  L   M   GL P   T T+L+
Sbjct: 420 MNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERGLFPDSYTLTILI 477



 Score =  117 bits (294), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 75/289 (25%), Positives = 133/289 (46%), Gaps = 37/289 (12%)

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
           Q G   D  TY T++  L + +  G  +KL ++M   G  P+  T   LI  + +   L 
Sbjct: 428 QQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERGLFPDSYTLTILIDGHCKLGNLQ 487

Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
            A+++FK+M+    + D VTY TL+D   K G +D A +++  M +  + P   ++S+++
Sbjct: 488 NAMELFKKMKEKRIKLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISFSILV 547

Query: 473 NCLGKAGHLQAAHQL----------------------FC-------------EMVNQGCI 497
           N L   GHL  A ++                      +C             +M+++G +
Sbjct: 548 NALCSKGHLSEAFRVWDEMISKSIKPTVMICNSMIKGYCRSGNASDGEIFLEKMISEGFV 607

Query: 498 PNLVTYNIMIALQAKARNYQSALKLYRDMQ--NAGFEPDKVTYSIVMEVLGHCGYLDEAE 555
           P+ ++YN +I    K  N   A  L + M+    G  PD  TY+ ++        + EAE
Sbjct: 608 PDCISYNTLIYGFVKEENMSKAFGLVKKMEEKQGGLVPDVFTYNSILHGFCRENQMKEAE 667

Query: 556 AVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPN 604
           AV  +M  +   PD   Y  L++ +    N+ +A+ +++ MLQ G  P+
Sbjct: 668 AVLRKMIERGVNPDRSTYTSLINGFVSQDNLTEAFRFHDEMLQRGFSPD 716



 Score =  112 bits (281), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 98/448 (21%), Positives = 193/448 (43%), Gaps = 62/448 (13%)

Query: 356 FKHDEHTYTTMVGILGRARQFGAINKLLDQMVR-----------------DGCQPNVVTY 398
           FKH   + + M+ IL R+ +       + +M+R                   C  N   +
Sbjct: 99  FKHTSLSLSAMIHILVRSGRLSDAQSCVLRMIRRSGVSRVEIVNSLVSTYSNCGSNDSVF 158

Query: 399 NRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQA 458
           + LI ++ +A  L EA + F  ++  G          LI    + G++++A  +Y+++  
Sbjct: 159 DLLIRTFVQARKLREAYEAFTLLRSKGYTVSIDACNALIGSLVRIGWVELAWRIYQEISR 218

Query: 459 AGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQA------- 511
           +G+  + +T ++++N L K G ++       E+  +G  P++VTYN +I+  +       
Sbjct: 219 SGVGVNVYTLNIMVNALCKDGKMEKVGTFLSEVQEKGVYPDIVTYNTLISAYSSQGLMEE 278

Query: 512 ----------------------------KARNYQSALKLYRDMQNAGFEPDKVTY-SIVM 542
                                       K   Y+ A +++ +M  +G  PD  TY S++M
Sbjct: 279 AFELMHAMPSKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLM 338

Query: 543 EVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLR 602
           E     G   E E +F++MR ++ VPD   +  ++ L+ ++GN+ KA  ++ ++ +AGL 
Sbjct: 339 EACKK-GDAVETENIFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLI 397

Query: 603 PNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS--CCTEARSPYDMG 660
           P+      L+  + R G +S+A +L   ML  G    + TY  +L   C  +     D  
Sbjct: 398 PDNVIYTILIQGYCRKGMISEAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKL 457

Query: 661 FCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRESKRGLV--DAVVD 718
           F +E+      P    L  +        N+++ +  F +M   +++  K  +V  + ++D
Sbjct: 458 F-NEMTERGLFPDSYTLTILIDGHCKLGNLQNAMELFKKM---KEKRIKLDVVTYNTLLD 513

Query: 719 FLHKSGLKEEAGSVWEVAAQKNVYPDAV 746
              K G  + A  +W     K + P  +
Sbjct: 514 GFGKVGDIDTAKEIWADMVSKEILPTPI 541



 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 49/221 (22%), Positives = 99/221 (44%), Gaps = 2/221 (0%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           ++   K D  TY T++   G+        ++   MV     P  ++++ L+++     +L
Sbjct: 497 KEKRIKLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISFSILVNALCSKGHL 556

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
           +EA  V+ +M     +P  +   ++I  + ++G         +KM + G  PD  +Y+ +
Sbjct: 557 SEAFRVWDEMISKSIKPTVMICNSMIKGYCRSGNASDGEIFLEKMISEGFVPDCISYNTL 616

Query: 472 INCLGKAGHLQAAHQLFCEMVNQ--GCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNA 529
           I    K  ++  A  L  +M  +  G +P++ TYN ++    +    + A  + R M   
Sbjct: 617 IYGFVKEENMSKAFGLVKKMEEKQGGLVPDVFTYNSILHGFCRENQMKEAEAVLRKMIER 676

Query: 530 GFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDE 570
           G  PD+ TY+ ++        L EA     EM ++ + PD+
Sbjct: 677 GVNPDRSTYTSLINGFVSQDNLTEAFRFHDEMLQRGFSPDD 717


>gi|357491947|ref|XP_003616261.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355517596|gb|AES99219.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 811

 Score =  149 bits (377), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 89/301 (29%), Positives = 161/301 (53%), Gaps = 1/301 (0%)

Query: 347 FNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYG 406
           F+ + R+ G +    ++ T++    R++       L   M  +   P+V TY+ LI+   
Sbjct: 249 FDEISRR-GLRPSVVSFNTLISGYCRSKNVEEGFVLKSVMESERISPDVFTYSALINGLC 307

Query: 407 RANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTF 466
           + + + EA  +F +M  +G  P+ VT+ TLID   K G +D+A+  ++ M+  G+ PD  
Sbjct: 308 KESRVEEANGLFDEMCEMGLVPNGVTFTTLIDGQCKHGKIDLALRNFEIMKDRGIRPDLI 367

Query: 467 TYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDM 526
           TY+ +IN L + G L+ A +L  EM+  G  P+ +T+  ++    K  +  SAL++   M
Sbjct: 368 TYNALINGLCRDGDLKEARKLLNEMIGNGFKPDKITFTTLMDGCCKDGDMDSALEIKDRM 427

Query: 527 QNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNV 586
              G E D V ++ ++  L   G + +AE +  +M      PD+P Y +++D + K G+V
Sbjct: 428 VEEGIELDDVAFTALISGLCRDGRVRDAERMLKDMLSAGHKPDDPTYTMVIDCFCKKGDV 487

Query: 587 RKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLL 646
           +   +  + M + G  P V T N+L++ F + GQ+ +A  LL  MLN+ + P+  T+ +L
Sbjct: 488 KMGAKLLKEMQRDGRVPGVVTYNALMNGFCKQGQMKNAKMLLHAMLNMEVVPNDITFNIL 547

Query: 647 L 647
           L
Sbjct: 548 L 548



 Score =  140 bits (352), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 82/260 (31%), Positives = 137/260 (52%)

Query: 390 GCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVA 449
           G  PNV  +N L+H + +   +  A  VF ++   G  P  V++ TLI  + ++  ++  
Sbjct: 221 GYPPNVYLFNILMHGFCKIGDVMNARMVFDEISRRGLRPSVVSFNTLISGYCRSKNVEEG 280

Query: 450 MDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIAL 509
             +   M++  +SPD FTYS +IN L K   ++ A+ LF EM   G +PN VT+  +I  
Sbjct: 281 FVLKSVMESERISPDVFTYSALINGLCKESRVEEANGLFDEMCEMGLVPNGVTFTTLIDG 340

Query: 510 QAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPD 569
           Q K      AL+ +  M++ G  PD +TY+ ++  L   G L EA  +  EM    + PD
Sbjct: 341 QCKHGKIDLALRNFEIMKDRGIRPDLITYNALINGLCRDGDLKEARKLLNEMIGNGFKPD 400

Query: 570 EPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQ 629
           +  +  L+D   K G++  A E  + M++ G+  +     +L+S   R G++ DA  +L+
Sbjct: 401 KITFTTLMDGCCKDGDMDSALEIKDRMVEEGIELDDVAFTALISGLCRDGRVRDAERMLK 460

Query: 630 GMLNLGLKPSLQTYTLLLSC 649
            ML+ G KP   TYT+++ C
Sbjct: 461 DMLSAGHKPDDPTYTMVIDC 480



 Score =  113 bits (283), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 81/339 (23%), Positives = 153/339 (45%), Gaps = 35/339 (10%)

Query: 344 LGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLL-------------------D 384
             FFN+L  +  F+H  H Y+TM   L         + L                     
Sbjct: 83  FSFFNYLASRPPFRHTLHNYSTMAHFLSSHNLLSQTHSLFLFIISKMGHHSSTSLISSLI 142

Query: 385 QMVRDGCQPN--VVTYNRLIHSYGRANYLNEALDVFKQMQ-------VVGCEPDRVTYCT 435
           Q V    + N  V+ ++ LI +Y  + ++ +A+   + ++       V GC+        
Sbjct: 143 QTVPTHHRHNHSVLVFDALIIAYTDSEFIEDAIQCLRLVKKNNFSIPVCGCD---YLLRR 199

Query: 436 LIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQG 495
           ++ ++ + G      + Y ++   G  P+ + ++++++   K G +  A  +F E+  +G
Sbjct: 200 VMKLNQQPGH---CWEFYLEVLDYGYPPNVYLFNILMHGFCKIGDVMNARMVFDEISRRG 256

Query: 496 CIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAE 555
             P++V++N +I+   +++N +    L   M++    PD  TYS ++  L     ++EA 
Sbjct: 257 LRPSVVSFNTLISGYCRSKNVEEGFVLKSVMESERISPDVFTYSALINGLCKESRVEEAN 316

Query: 556 AVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAF 615
            +F EM     VP+   +  L+D   K G +  A   +E M   G+RP++ T N+L++  
Sbjct: 317 GLFDEMCEMGLVPNGVTFTTLIDGQCKHGKIDLALRNFEIMKDRGIRPDLITYNALINGL 376

Query: 616 LRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS-CCTEA 653
            R G L +A  LL  M+  G KP   T+T L+  CC + 
Sbjct: 377 CRDGDLKEARKLLNEMIGNGFKPDKITFTTLMDGCCKDG 415



 Score = 97.4 bits (241), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 61/216 (28%), Positives = 109/216 (50%), Gaps = 3/216 (1%)

Query: 336 QLQDHTVALGFFNW-LRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPN 394
           Q +   + L   N+ + +  G + D  TY  ++  L R        KLL++M+ +G +P+
Sbjct: 341 QCKHGKIDLALRNFEIMKDRGIRPDLITYNALINGLCRDGDLKEARKLLNEMIGNGFKPD 400

Query: 395 VVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYK 454
            +T+  L+    +   ++ AL++  +M   G E D V +  LI    + G +  A  M K
Sbjct: 401 KITFTTLMDGCCKDGDMDSALEIKDRMVEEGIELDDVAFTALISGLCRDGRVRDAERMLK 460

Query: 455 KMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKAR 514
            M +AG  PD  TY+++I+C  K G ++   +L  EM   G +P +VTYN ++    K  
Sbjct: 461 DMLSAGHKPDDPTYTMVIDCFCKKGDVKMGAKLLKEMQRDGRVPGVVTYNALMNGFCKQG 520

Query: 515 NYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGY 550
             ++A  L   M N    P+ +T++I+++  GHC +
Sbjct: 521 QMKNAKMLLHAMLNMEVVPNDITFNILLD--GHCKH 554


>gi|359484268|ref|XP_002278014.2| PREDICTED: pentatricopeptide repeat-containing protein
           At2g06000-like [Vitis vinifera]
          Length = 641

 Score =  149 bits (377), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 93/347 (26%), Positives = 172/347 (49%), Gaps = 5/347 (1%)

Query: 313 LAEEALGNTNYSMDAYQANQVLKQLQDHTVALGFFNWLRRQAGFK--HDEHTYTTMVGIL 370
           +A   +    +S+  Y  N++L QL           + R Q G     D  ++  ++  L
Sbjct: 190 IARTWVDGVEFSLVVY--NKLLNQLVRGNQVDEAVCFFREQMGLHGPFDSCSFNILIRGL 247

Query: 371 GRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVG-CEPD 429
            R  +     +L ++M   GC P+V+TYN LI+ + R N ++   D+ K++       PD
Sbjct: 248 CRIGKVDKAFELFNEMRGFGCSPDVITYNTLINGFCRVNEVDRGHDLLKELLSKNDLSPD 307

Query: 430 RVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFC 489
            VTY ++I  + K G ++ A  ++  M ++G+ P+ FT++++IN  GK G + +A  ++ 
Sbjct: 308 VVTYTSIISGYCKLGKMEKASILFNNMISSGIKPNAFTFNILINGFGKVGDMVSAENMYE 367

Query: 490 EMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCG 549
           EM+  GC P+++T+  +I    +    + +LKL+ ++      P++ T++I+   L    
Sbjct: 368 EMLLLGCPPDIITFTSLIDGHCRTGKVERSLKLWHELNARNLSPNEYTFAILTNALCKEN 427

Query: 550 YLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCN 609
            L EA     +++ ++ V    +Y  ++D + KAGNV +A      M +   +P+  T  
Sbjct: 428 RLHEARGFLRDLKWRHIVAQPFMYNPVIDGFCKAGNVDEANVILAEMEEKRCKPDKITYT 487

Query: 610 SLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSP 656
            L+      G+LS+A  +   ML  G  P   T T L+SC  +A  P
Sbjct: 488 ILIIGHCMKGRLSEAISIFNRMLGTGCAPDSITMTSLISCLLKAGMP 534


>gi|224713524|gb|ACN62069.1| PPR-814c [Zea mays]
          Length = 814

 Score =  149 bits (377), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 88/295 (29%), Positives = 147/295 (49%)

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
           Q G   D  TY ++V  L +AR        L QMV     PN  TYN LI+ Y       
Sbjct: 247 QRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQWK 306

Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
           EA+ VFK+M+     PD VT   L+    K G +  A D++  M   G +PD F+Y++++
Sbjct: 307 EAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIML 366

Query: 473 NCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFE 532
           N     G L     LF  M+  G  P+  T+N++I   A       A+ ++ +M++ G +
Sbjct: 367 NGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVK 426

Query: 533 PDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEW 592
           PD VTY  V+  L   G +D+A   F +M  +   PD+  Y  L+  +   G++ KA E 
Sbjct: 427 PDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKEL 486

Query: 593 YEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
              ++  G+  ++   +S+++   ++G++ DA ++    +N+GL P    Y++L+
Sbjct: 487 ISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYSMLM 541



 Score =  140 bits (353), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 125/490 (25%), Positives = 226/490 (46%), Gaps = 38/490 (7%)

Query: 342 VALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRL 401
           +AL FF  L R     +       + G     R   A++ LL +    GC P+V +Y+ L
Sbjct: 129 LALAFFGQLLRTGLRVNIIIANHLLEGFCEAKRTDEALDILLHRTPELGCVPDVFSYSIL 188

Query: 402 IHSYGRANYLNEALDVFKQMQVVG--CEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAA 459
           + S        +A D+ + M   G  C P+ V Y T+ID   K G ++ A D++K+M   
Sbjct: 189 LKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNTVIDGFFKEGDVNKACDLFKEMVQR 248

Query: 460 GLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSA 519
           G+ PD  TY+ +++ L KA  +  A     +MVN+  +PN  TYN +I   +    ++ A
Sbjct: 249 GIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEA 308

Query: 520 LKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDL 579
           ++++++M+     PD VT S++M  L   G + EA  VF  M  K   PD   Y ++++ 
Sbjct: 309 VRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNG 368

Query: 580 WGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPS 639
           +   G +    + ++ ML  G+ P+  T N L+ A+   G L  A  +   M + G+KP 
Sbjct: 369 YATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPD 428

Query: 640 LQTY-TLLLSCCTEARSPYDMGFCHELMAVSGHP---AHMFLLSMPSPGPDGQNVRDHVG 695
           + TY T++ + C   +    M   ++++     P   A+  L+         Q    H G
Sbjct: 429 VVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLI---------QGFCTH-G 478

Query: 696 SFLEMMHSEDRESKRGL------VDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAVKEK 749
           S L+           G+        ++++ L K G   +A +++++     ++PDAV   
Sbjct: 479 SLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVV-- 536

Query: 750 GMSYWLINLHVMSDGTAVIA-LSRTLAWFRKQMLISGVGPSRI---DIVTGWGRRSRV-T 804
                     ++ DG  ++  + + L  F   M+ +G+ P+ +    +V G+ +  R+  
Sbjct: 537 --------YSMLMDGYCLVGKMEKALRVF-DAMVSAGIEPNVVVYCTLVNGYCKIGRIDE 587

Query: 805 GTSLVRQAVQ 814
           G SL R+ +Q
Sbjct: 588 GLSLFREMLQ 597



 Score =  130 bits (327), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 81/291 (27%), Positives = 141/291 (48%), Gaps = 4/291 (1%)

Query: 359 DEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVF 418
           D  +Y  M+           +  L D M+ DG  P+  T+N LI +Y     L++A+ +F
Sbjct: 358 DVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIF 417

Query: 419 KQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKA 478
            +M+  G +PD VTY T+I    + G +D AM+ + +M   G++PD + Y+ +I      
Sbjct: 418 NEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTH 477

Query: 479 GHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTY 538
           G L  A +L  E++N G   ++V ++ +I    K      A  ++    N G  PD V Y
Sbjct: 478 GSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVY 537

Query: 539 SIVMEVLGHC--GYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAM 596
           S++M+  G+C  G +++A  VF  M      P+  VY  LV+ + K G + +    +  M
Sbjct: 538 SMLMD--GYCLVGKMEKALRVFDAMVSAGIEPNVVVYCTLVNGYCKIGRIDEGLSLFREM 595

Query: 597 LQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
           LQ G++P+    + ++    + G+   A      M   G+   + TY ++L
Sbjct: 596 LQRGIKPSTILYSIIIDGLFQAGRTVPAKVKFHEMTESGIAMDICTYNIVL 646



 Score =  126 bits (316), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 72/270 (26%), Positives = 135/270 (50%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           G   D   +++++  L +  +      + D  V  G  P+ V Y+ L+  Y     + +A
Sbjct: 494 GMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYSMLMDGYCLVGKMEKA 553

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
           L VF  M   G EP+ V YCTL++ + K G +D  + ++++M   G+ P T  YS+II+ 
Sbjct: 554 LRVFDAMVSAGIEPNVVVYCTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDG 613

Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPD 534
           L +AG    A   F EM   G   ++ TYNI++    K R +  A+ L+++++    + +
Sbjct: 614 LFQAGRTVPAKVKFHEMTESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKIN 673

Query: 535 KVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYE 594
            +T + +++ +     ++EA+ +FA + R   VP    Y +++    K G V +A + + 
Sbjct: 674 IITLNTMIDGMFQTRRVEEAKDLFASISRSRLVPSVVTYSIMITNLIKEGLVEEAEDMFS 733

Query: 595 AMLQAGLRPNVPTCNSLLSAFLRVGQLSDA 624
           +M  AG  PN    N ++   L+  ++  A
Sbjct: 734 SMQNAGCEPNSRLLNHVVRELLKKNEIVRA 763



 Score =  114 bits (285), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 75/302 (24%), Positives = 142/302 (47%), Gaps = 4/302 (1%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           G   D +T+  ++              + ++M   G +P+VVTY  +I +  R   +++A
Sbjct: 389 GIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDA 448

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
           ++ F QM   G  PD+  Y  LI      G L  A ++  ++   G+  D   +S IIN 
Sbjct: 449 MEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINN 508

Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPD 534
           L K G +  A  +F   VN G  P+ V Y++++         + AL+++  M +AG EP+
Sbjct: 509 LCKLGRVMDAQNIFDLTVNVGLHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPN 568

Query: 535 KVTYSIVMEVLGHC--GYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEW 592
            V Y  ++   G+C  G +DE  ++F EM ++   P   +Y +++D   +AG    A   
Sbjct: 569 VVVYCTLVN--GYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFQAGRTVPAKVK 626

Query: 593 YEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTE 652
           +  M ++G+  ++ T N +L    +     +A  L + +  + +K ++ T   ++    +
Sbjct: 627 FHEMTESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIDGMFQ 686

Query: 653 AR 654
            R
Sbjct: 687 TR 688



 Score =  110 bits (275), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 79/326 (24%), Positives = 150/326 (46%), Gaps = 4/326 (1%)

Query: 326 DAYQANQVLKQLQDHTV---ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKL 382
           D Y  N ++K   +  +   A+  FN +R   G K D  TY T++  L R  +     + 
Sbjct: 393 DFYTFNVLIKAYANCGMLDKAMIIFNEMRDH-GVKPDVVTYRTVIAALCRIGKMDDAMEK 451

Query: 383 LDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAK 442
            +QM+  G  P+   YN LI  +     L +A ++  ++   G   D V + ++I+   K
Sbjct: 452 FNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCK 511

Query: 443 AGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVT 502
            G +  A +++      GL PD   YS++++     G ++ A ++F  MV+ G  PN+V 
Sbjct: 512 LGRVMDAQNIFDLTVNVGLHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVV 571

Query: 503 YNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMR 562
           Y  ++    K       L L+R+M   G +P  + YSI+++ L   G    A+  F EM 
Sbjct: 572 YCTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFQAGRTVPAKVKFHEMT 631

Query: 563 RKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLS 622
                 D   Y +++    K     +A   ++ +    ++ N+ T N+++    +  ++ 
Sbjct: 632 ESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIDGMFQTRRVE 691

Query: 623 DAYHLLQGMLNLGLKPSLQTYTLLLS 648
           +A  L   +    L PS+ TY+++++
Sbjct: 692 EAKDLFASISRSRLVPSVVTYSIMIT 717



 Score =  107 bits (267), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 71/298 (23%), Positives = 146/298 (48%), Gaps = 3/298 (1%)

Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLI 402
           A+  FN +  Q G   D++ Y  ++             +L+ +++ +G   ++V ++ +I
Sbjct: 448 AMEKFNQMIDQ-GVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSII 506

Query: 403 HSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLS 462
           ++  +   + +A ++F     VG  PD V Y  L+D +   G ++ A+ ++  M +AG+ 
Sbjct: 507 NNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIE 566

Query: 463 PDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMI-ALQAKARNYQSALK 521
           P+   Y  ++N   K G +     LF EM+ +G  P+ + Y+I+I  L    R   + +K
Sbjct: 567 PNVVVYCTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFQAGRTVPAKVK 626

Query: 522 LYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWG 581
            + +M  +G   D  TY+IV+  L      DEA  +F E+R  N   +      ++D   
Sbjct: 627 -FHEMTESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIDGMF 685

Query: 582 KAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPS 639
           +   V +A + + ++ ++ L P+V T + +++  ++ G + +A  +   M N G +P+
Sbjct: 686 QTRRVEEAKDLFASISRSRLVPSVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPN 743



 Score =  101 bits (251), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 79/324 (24%), Positives = 126/324 (38%), Gaps = 71/324 (21%)

Query: 361 HTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQ 420
           HTY  ++    RA +         Q++R G + N++  N L+  +  A   +EALD+   
Sbjct: 112 HTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLEGFCEAKRTDEALDI--- 168

Query: 421 MQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGH 480
                                          +  +    G  PD F+YS+++  L   G 
Sbjct: 169 -------------------------------LLHRTPELGCVPDVFSYSILLKSLCDQGK 197

Query: 481 LQAAHQLFCEMVNQG--CIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTY 538
              A  L   M   G  C PN+V YN +I    K  +   A  L+++M   G  PD VTY
Sbjct: 198 SGQADDLLRMMAEGGAVCSPNVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTY 257

Query: 539 SIVMEVLGHCGYLDEAEA-----------------------------------VFAEMRR 563
           + V+  L     +D+AEA                                   VF EMRR
Sbjct: 258 NSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRR 317

Query: 564 KNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSD 623
            + +PD     +L+    K G +++A + ++ M   G  P+V + N +L+ +   G L D
Sbjct: 318 HSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVD 377

Query: 624 AYHLLQGMLNLGLKPSLQTYTLLL 647
              L   ML  G+ P   T+ +L+
Sbjct: 378 MTDLFDLMLGDGIAPDFYTFNVLI 401



 Score = 87.4 bits (215), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 61/250 (24%), Positives = 112/250 (44%), Gaps = 35/250 (14%)

Query: 381 KLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLID-- 438
           ++ D MV  G +PNVV Y  L++ Y +   ++E L +F++M   G +P  + Y  +ID  
Sbjct: 555 RVFDAMVSAGIEPNVVVYCTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGL 614

Query: 439 ------IHAKAGF---------------------------LDVAMDMYKKMQAAGLSPDT 465
                 + AK  F                            D A+ ++K+++A  +  + 
Sbjct: 615 FQAGRTVPAKVKFHEMTESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINI 674

Query: 466 FTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRD 525
            T + +I+ + +   ++ A  LF  +     +P++VTY+IMI    K    + A  ++  
Sbjct: 675 ITLNTMIDGMFQTRRVEEAKDLFASISRSRLVPSVVTYSIMITNLIKEGLVEEAEDMFSS 734

Query: 526 MQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGN 585
           MQNAG EP+    + V+  L     +  A A  +++  +N+  +     LLVDL+   G 
Sbjct: 735 MQNAGCEPNSRLLNHVVRELLKKNEIVRAGAYLSKIDERNFSLEHLTTMLLVDLFSSKGT 794

Query: 586 VRKAWEWYEA 595
            R+   +  A
Sbjct: 795 CREHIRFLPA 804



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 51/190 (26%), Positives = 96/190 (50%), Gaps = 3/190 (1%)

Query: 461 LSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSAL 520
           LSP + TY+++++C  +A   + A   F +++  G   N++  N ++    +A+    AL
Sbjct: 107 LSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLEGFCEAKRTDEAL 166

Query: 521 K-LYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWV--PDEPVYGLLV 577
             L       G  PD  +YSI+++ L   G   +A+ +   M     V  P+   Y  ++
Sbjct: 167 DILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNTVI 226

Query: 578 DLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLK 637
           D + K G+V KA + ++ M+Q G+ P++ T NS++ A  +   +  A   L+ M+N  + 
Sbjct: 227 DGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVL 286

Query: 638 PSLQTYTLLL 647
           P+  TY  L+
Sbjct: 287 PNNWTYNNLI 296


>gi|449463418|ref|XP_004149431.1| PREDICTED: pentatricopeptide repeat-containing protein At1g77360,
           mitochondrial-like [Cucumis sativus]
 gi|449499065|ref|XP_004160711.1| PREDICTED: pentatricopeptide repeat-containing protein At1g77360,
           mitochondrial-like [Cucumis sativus]
          Length = 439

 Score =  149 bits (377), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 90/348 (25%), Positives = 175/348 (50%), Gaps = 5/348 (1%)

Query: 315 EEALGNTNYSMDAYQANQVLKQLQDH-TVALGFFNWLRRQAGFKHDEHTYTTMVGILGRA 373
           E AL  T   +    A  VL++ ++   +A  FF W  +Q  + H    Y +M+  L + 
Sbjct: 10  ETALDQTGIRISPEIAEPVLRRFENAGMLAYRFFEWASKQRNYVHSVRAYHSMIESLAKI 69

Query: 374 RQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTY 433
           RQ+  +  L++ M R+    NV  +  ++  Y RA  + EA+  F  M+    +P+   +
Sbjct: 70  RQYQMVWDLVNAM-RNKEILNVEAFCIIMRKYARAQKVEEAVYTFNVMEKYNMKPNVAAF 128

Query: 434 CTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVN 493
             L+    K+  +  A +++  M+     PD+ TYS++I   G+A +L  A +++ EM++
Sbjct: 129 NGLLSALCKSKNVRKAQEIFDNMKDQ-FVPDSKTYSILIEGWGRAPNLPKAREIYREMID 187

Query: 494 QGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDE 553
            GCIP+ VTY+IM+ +  KA     A+++ ++M     +P    YS+++   G    +++
Sbjct: 188 SGCIPDEVTYSIMVDVLCKAGRVDEAVEIVKEMDYNNCKPSSFIYSVLVHTYGVENRIED 247

Query: 554 AEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLS 613
           A + F EM R   + D   Y  L+  + KA  ++  +   + M   G+ PN  TCN +++
Sbjct: 248 AVSTFLEMERNGVMADVAAYNALISAFCKANKMKNVYRVLKDMDLKGVNPNSRTCNIIIN 307

Query: 614 AFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGF 661
           + +  G+  +A+ + + M+ +  +P + +YT+++      R   DM  
Sbjct: 308 SLIGRGETDEAFKIFRRMIKV-CEPDVDSYTMIIKMFC-GRKELDMAL 353



 Score =  131 bits (329), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 81/301 (26%), Positives = 155/301 (51%), Gaps = 3/301 (0%)

Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLI 402
           A+  FN + +    K +   +  ++  L +++      ++ D M +D   P+  TY+ LI
Sbjct: 109 AVYTFNVMEKY-NMKPNVAAFNGLLSALCKSKNVRKAQEIFDNM-KDQFVPDSKTYSILI 166

Query: 403 HSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLS 462
             +GRA  L +A +++++M   GC PD VTY  ++D+  KAG +D A+++ K+M      
Sbjct: 167 EGWGRAPNLPKAREIYREMIDSGCIPDEVTYSIMVDVLCKAGRVDEAVEIVKEMDYNNCK 226

Query: 463 PDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKL 522
           P +F YSV+++  G    ++ A   F EM   G + ++  YN +I+   KA   ++  ++
Sbjct: 227 PSSFIYSVLVHTYGVENRIEDAVSTFLEMERNGVMADVAAYNALISAFCKANKMKNVYRV 286

Query: 523 YRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGK 582
            +DM   G  P+  T +I++  L   G  DEA  +F  M  K   PD   Y +++ ++  
Sbjct: 287 LKDMDLKGVNPNSRTCNIIINSLIGRGETDEAFKIFRRM-IKVCEPDVDSYTMIIKMFCG 345

Query: 583 AGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQT 642
              +  A + ++ M +    P++ T + L++   ++G  + A  LL+ M+  G++PS  T
Sbjct: 346 RKELDMALKIWKYMKKKQFVPSMHTFSVLINGLCQIGNATQACVLLEEMIEKGIRPSGAT 405

Query: 643 Y 643
           +
Sbjct: 406 F 406



 Score =  122 bits (306), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 90/352 (25%), Positives = 170/352 (48%), Gaps = 13/352 (3%)

Query: 298 VESVSRILRQWKWGPLAEEALGNTN----YSMDAYQA--NQVLKQL---QDHTVALGFFN 348
           VE+   I+R++      EEA+   N    Y+M    A  N +L  L   ++   A   F+
Sbjct: 90  VEAFCIIMRKYARAQKVEEAVYTFNVMEKYNMKPNVAAFNGLLSALCKSKNVRKAQEIFD 149

Query: 349 WLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRA 408
            ++ Q  F  D  TY+ ++   GRA       ++  +M+  GC P+ VTY+ ++    +A
Sbjct: 150 NMKDQ--FVPDSKTYSILIEGWGRAPNLPKAREIYREMIDSGCIPDEVTYSIMVDVLCKA 207

Query: 409 NYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTY 468
             ++EA+++ K+M    C+P    Y  L+  +     ++ A+  + +M+  G+  D   Y
Sbjct: 208 GRVDEAVEIVKEMDYNNCKPSSFIYSVLVHTYGVENRIEDAVSTFLEMERNGVMADVAAY 267

Query: 469 SVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQN 528
           + +I+   KA  ++  +++  +M  +G  PN  T NI+I           A K++R M  
Sbjct: 268 NALISAFCKANKMKNVYRVLKDMDLKGVNPNSRTCNIIINSLIGRGETDEAFKIFRRMIK 327

Query: 529 AGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRK 588
              EPD  +Y++++++      LD A  ++  M++K +VP    + +L++   + GN  +
Sbjct: 328 VC-EPDVDSYTMIIKMFCGRKELDMALKIWKYMKKKQFVPSMHTFSVLINGLCQIGNATQ 386

Query: 589 AWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSL 640
           A    E M++ G+RP+  T   L    ++ G+  D    LQ  +NL +K  L
Sbjct: 387 ACVLLEEMIEKGIRPSGATFGRLRHLLIKEGR-KDVLKFLQEKMNLLVKEPL 437


>gi|410109885|gb|AFV61022.1| pentatricopeptide repeat-containing protein 11, partial
           [Coelocarpum swinglei]
          Length = 429

 Score =  149 bits (376), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 84/279 (30%), Positives = 152/279 (54%)

Query: 370 LGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPD 429
           L + + F  +     +++  G   ++  +N L+H + +   +  AL VF  +   G  P 
Sbjct: 115 LMKLKYFKLVWXFYKEILECGYPASLYFFNILMHRFCKEGDIRVALSVFDAITKWGLRPS 174

Query: 430 RVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFC 489
            V++ TL++ + + G LD    +   M A+G+ PD +TYSV+IN L K   +  A++LF 
Sbjct: 175 VVSFNTLMNGYIRLGDLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMDDANELFD 234

Query: 490 EMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCG 549
           EM+++G +PN VT+  +I    K      A+++Y+ M +    PD +TY+ ++  L   G
Sbjct: 235 EMLDKGLVPNGVTFTTLIDGHCKNGRVDLAMEVYKQMLSQSLSPDLITYNTLIYGLCKKG 294

Query: 550 YLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCN 609
            L +A+ +  EMR K   PD+  Y  L+D   K G++  A+E  + M+Q  +R +     
Sbjct: 295 DLKQAQDLIDEMRMKGLKPDKISYTTLIDGCCKEGDLETAFEHRKRMIQENIRLDDVAYT 354

Query: 610 SLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
           +L+S   + G+  DA  +L+ ML++GL+P   TYT++++
Sbjct: 355 ALISGLCQEGRSIDAEKMLREMLSVGLRPDTGTYTMIIN 393



 Score =  123 bits (309), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 76/267 (28%), Positives = 138/267 (51%)

Query: 382 LLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHA 441
           + D + + G +P+VV++N L++ Y R   L+E   +   M   G +PD  TY  LI+   
Sbjct: 162 VFDAITKWGLRPSVVSFNTLMNGYIRLGDLDEGFRLKSAMHASGVQPDVYTYSVLINGLC 221

Query: 442 KAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLV 501
           K   +D A +++ +M   GL P+  T++ +I+   K G +  A +++ +M++Q   P+L+
Sbjct: 222 KESKMDDANELFDEMLDKGLVPNGVTFTTLIDGHCKNGRVDLAMEVYKQMLSQSLSPDLI 281

Query: 502 TYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEM 561
           TYN +I    K  + + A  L  +M+  G +PDK++Y+ +++     G L+ A      M
Sbjct: 282 TYNTLIYGLCKKGDLKQAQDLIDEMRMKGLKPDKISYTTLIDGCCKEGDLETAFEHRKRM 341

Query: 562 RRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQL 621
            ++N   D+  Y  L+    + G    A +    ML  GLRP+  T   +++ F + G +
Sbjct: 342 IQENIRLDDVAYTALISGLCQEGRSIDAEKMLREMLSVGLRPDTGTYTMIINEFCKKGDV 401

Query: 622 SDAYHLLQGMLNLGLKPSLQTYTLLLS 648
                LL+ M   G  PS+ TY +L++
Sbjct: 402 WTGSKLLKEMQRDGHVPSVVTYNVLMN 428



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 82/276 (29%), Positives = 140/276 (50%), Gaps = 1/276 (0%)

Query: 339 DHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTY 398
           D  VAL  F+ + +  G +    ++ T++    R        +L   M   G QP+V TY
Sbjct: 155 DIRVALSVFDAITKW-GLRPSVVSFNTLMNGYIRLGDLDEGFRLKSAMHASGVQPDVYTY 213

Query: 399 NRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQA 458
           + LI+   + + +++A ++F +M   G  P+ VT+ TLID H K G +D+AM++YK+M +
Sbjct: 214 SVLINGLCKESKMDDANELFDEMLDKGLVPNGVTFTTLIDGHCKNGRVDLAMEVYKQMLS 273

Query: 459 AGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQS 518
             LSPD  TY+ +I  L K G L+ A  L  EM  +G  P+ ++Y  +I    K  + ++
Sbjct: 274 QSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMRMKGLKPDKISYTTLIDGCCKEGDLET 333

Query: 519 ALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVD 578
           A +  + M       D V Y+ ++  L   G   +AE +  EM      PD   Y ++++
Sbjct: 334 AFEHRKRMIQENIRLDDVAYTALISGLCQEGRSIDAEKMLREMLSVGLRPDTGTYTMIIN 393

Query: 579 LWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSA 614
            + K G+V    +  + M + G  P+V T N L++ 
Sbjct: 394 EFCKKGDVWTGSKLLKEMQRDGHVPSVVTYNVLMNG 429



 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 80/329 (24%), Positives = 147/329 (44%), Gaps = 21/329 (6%)

Query: 346 FFNWLR--RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMV---------------- 387
           FF WL     + F+H  H+Y TM+  L   +       L+  +V                
Sbjct: 1   FFTWLSFPTNSTFRHTLHSYCTMIHFLCTHQMLPEAKNLIQVVVSRKGKNSASAVFAAIL 60

Query: 388 -RDGCQ-PNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGF 445
              G Q  ++  ++ LI +Y  + +L +A++ ++  +         T   +++   K  +
Sbjct: 61  ETQGTQRSDIYVFSGLITAYLESGFLRDAIECYRLTREHKFWVPFDTCRKVLEHLMKLKY 120

Query: 446 LDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNI 505
             +    YK++   G     + ++++++   K G ++ A  +F  +   G  P++V++N 
Sbjct: 121 FKLVWXFYKEILECGYPASLYFFNILMHRFCKEGDIRVALSVFDAITKWGLRPSVVSFNT 180

Query: 506 MIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKN 565
           ++    +  +     +L   M  +G +PD  TYS+++  L     +D+A  +F EM  K 
Sbjct: 181 LMNGYIRLGDLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDKG 240

Query: 566 WVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAY 625
            VP+   +  L+D   K G V  A E Y+ ML   L P++ T N+L+    + G L  A 
Sbjct: 241 LVPNGVTFTTLIDGHCKNGRVDLAMEVYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQ 300

Query: 626 HLLQGMLNLGLKPSLQTYTLLLS-CCTEA 653
            L+  M   GLKP   +YT L+  CC E 
Sbjct: 301 DLIDEMRMKGLKPDKISYTTLIDGCCKEG 329


>gi|302142431|emb|CBI19634.3| unnamed protein product [Vitis vinifera]
          Length = 839

 Score =  149 bits (376), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 130/503 (25%), Positives = 221/503 (43%), Gaps = 72/503 (14%)

Query: 317 ALGNTNYSMDAYQANQVLKQLQ-DHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQ 375
           A+   N+       + VL+ L+ + T +LGFF ++ +Q  F+ +  +Y  +V IL R R 
Sbjct: 24  AISKLNFVFSDDIVDAVLRNLRLNPTASLGFFQFVSKQQNFRPNVKSYCKLVHILSRGRM 83

Query: 376 FGAINKLLDQMVRDGCQ----PNVV----------------TYNRLIHSYGRANYLNEAL 415
           +      L+Q+V D C+     NV+                 ++ ++  Y        AL
Sbjct: 84  YDETRAYLNQLV-DLCKFKDRGNVIWDELVGVYREFAFSPTVFDMILKVYVEKGLTKNAL 142

Query: 416 DVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCL 475
            VF  M   G  P   +  +L++   K G    A  +Y++M   G+ PD F  S+++N  
Sbjct: 143 YVFDNMGKCGRIPSLRSCNSLLNNLVKNGETHTAHYVYQQMIRVGIVPDVFMVSIMVNAF 202

Query: 476 GKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDK 535
            K G +  A     +M N G  PN+VTY+ +I       + ++A  + + M   G   + 
Sbjct: 203 CKDGKVDEAAGFVKKMENLGVEPNIVTYHSLINGYVSLGDVEAAKGVLKFMSEKGVSRNV 262

Query: 536 VTYSIVMEVLGHCGY--LDEAEAVFAEMRRKN-WVPDEPVYGLLVDLWGKAGNVRKAWEW 592
           VTY+++++  G+C    +DEAE V   M+ +   VPDE  YG+L+D + + G +  A   
Sbjct: 263 VTYTLLIK--GYCKQCKMDEAEKVLRGMQEEAALVPDERAYGVLIDGYCRTGKIDDAVRL 320

Query: 593 YEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTE 652
            + ML+ GL+ N+  CNSL++ + + G++ +A  ++  M++  LKP   +Y  LL     
Sbjct: 321 LDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMVDWNLKPDSYSYNTLLD---- 376

Query: 653 ARSPYDMGFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRESKRGL 712
                  G+C E     GH +  F                   +  + M  E  E     
Sbjct: 377 -------GYCRE-----GHTSEAF-------------------NLCDKMLQEGIEPTVLT 405

Query: 713 VDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAVKEKGMSYWLINLHVMSDGTAVIALSR 772
            + ++  L + G  ++A  +W +  ++ V PD V   G S  L  L  M +      L  
Sbjct: 406 YNTLLKGLCRVGAFDDALQIWHLMMKRGVAPDEV---GYSTLLDGLFKMENFEGASTL-- 460

Query: 773 TLAWFRKQMLISGVGPSRIDIVT 795
              W  K +L  G   SRI   T
Sbjct: 461 ---W--KDILARGFTKSRITFNT 478



 Score =  144 bits (362), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 136/568 (23%), Positives = 232/568 (40%), Gaps = 66/568 (11%)

Query: 265 ECVSERFSKPSREMKIPAGLAPFSRHFA-------STGNVVESVSRILRQWKWGPLAEEA 317
           +C  +   K  R M+  A L P  R +         TG + ++V  +    + G      
Sbjct: 275 QCKMDEAEKVLRGMQEEAALVPDERAYGVLIDGYCRTGKIDDAVRLLDEMLRLGL----- 329

Query: 318 LGNTNYSMDAYQANQVLKQLQDHT---VALGFFNWLRRQAGFKHDEHTYTTMVGILGRAR 374
              TN  +     N   K+ + H    V     +W       K D ++Y T++    R  
Sbjct: 330 --KTNLFICNSLINGYCKRGEIHEAEGVITRMVDW-----NLKPDSYSYNTLLDGYCREG 382

Query: 375 QFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYC 434
                  L D+M+++G +P V+TYN L+    R    ++AL ++  M   G  PD V Y 
Sbjct: 383 HTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKRGVAPDEVGYS 442

Query: 435 TLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQ 494
           TL+D   K    + A  ++K + A G +    T++ +I+ L K G +  A ++F +M + 
Sbjct: 443 TLLDGLFKMENFEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDL 502

Query: 495 GCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEA 554
           GC P+ +TY  +I    KA N   A K+   M+     P    Y+ ++  L     L E 
Sbjct: 503 GCSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREPISPSIEMYNSLISGLFKSRRLVEV 562

Query: 555 EAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSA 614
             +  EM  +   P+   YG L+D W K G + KA+  Y  M + GL  N+  C++++S 
Sbjct: 563 TDLLTEMGIRGLTPNIVTYGALIDGWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVSG 622

Query: 615 FLRVGQLSDAYHLLQGMLNLGLKPSLQTYTL--------------LLSCCTEARSPYDM- 659
             R+G++ +A  L+Q M++ G  P  + +                L   C     P ++ 
Sbjct: 623 LYRLGRIDEANLLMQKMVDHGFFPDHECFLKSDIRYAAIQKIADSLDESCKTFLLPNNIV 682

Query: 660 ------GFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHV------GSFLEMMHSEDRE 707
                 G C +   V        +LS+    PD       +      G+  E     D  
Sbjct: 683 YNIAIAGLC-KTGKVDDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEM 741

Query: 708 SKRGLV------DAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAVKEKGMSYWLINLHVM 761
            +RGLV      +A+++ L KS   + A  ++    QK ++P+ V            + +
Sbjct: 742 LRRGLVPNIVTYNALINGLCKSENVDRAQRLFHKLHQKGLFPNVV----------TYNTL 791

Query: 762 SDGTAVIALSRTLAWFRKQMLISGVGPS 789
            DG   I         + +M+  G+ PS
Sbjct: 792 IDGYCKIGNMDAAFKLKDKMIEEGISPS 819



 Score =  135 bits (341), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 93/326 (28%), Positives = 144/326 (44%), Gaps = 32/326 (9%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           +  G   D  TY T++    +A   G   K+   M R+   P++  YN LI    ++  L
Sbjct: 500 KDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREPISPSIEMYNSLISGLFKSRRL 559

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
            E  D+  +M + G  P+ VTY  LID   K G LD A   Y +M   GLS +    S +
Sbjct: 560 VEVTDLLTEMGIRGLTPNIVTYGALIDGWCKEGMLDKAFSSYFEMTENGLSANIIICSTM 619

Query: 472 INCLGKAGHLQAAHQLFCEMVNQG--------------------------------CIPN 499
           ++ L + G +  A+ L  +MV+ G                                 +PN
Sbjct: 620 VSGLYRLGRIDEANLLMQKMVDHGFFPDHECFLKSDIRYAAIQKIADSLDESCKTFLLPN 679

Query: 500 LVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFA 559
            + YNI IA   K      A + +  +   GF PD  TY  ++      G +DEA  +  
Sbjct: 680 NIVYNIAIAGLCKTGKVDDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRD 739

Query: 560 EMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVG 619
           EM R+  VP+   Y  L++   K+ NV +A   +  + Q GL PNV T N+L+  + ++G
Sbjct: 740 EMLRRGLVPNIVTYNALINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCKIG 799

Query: 620 QLSDAYHLLQGMLNLGLKPSLQTYTL 645
            +  A+ L   M+  G+ PS+Q   L
Sbjct: 800 NMDAAFKLKDKMIEEGISPSIQCNLL 825



 Score =  108 bits (270), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 85/347 (24%), Positives = 157/347 (45%), Gaps = 37/347 (10%)

Query: 337 LQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQ-PNV 395
           L D   A G   ++  + G   +  TYT ++    +  +     K+L  M  +    P+ 
Sbjct: 240 LGDVEAAKGVLKFMS-EKGVSRNVVTYTLLIKGYCKQCKMDEAEKVLRGMQEEAALVPDE 298

Query: 396 VTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKK 455
             Y  LI  Y R   +++A+ +  +M  +G + +     +LI+ + K G +  A  +  +
Sbjct: 299 RAYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITR 358

Query: 456 MQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMI-------- 507
           M    L PD+++Y+ +++   + GH   A  L  +M+ +G  P ++TYN ++        
Sbjct: 359 MVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGA 418

Query: 508 ---ALQA------------------------KARNYQSALKLYRDMQNAGFEPDKVTYSI 540
              ALQ                         K  N++ A  L++D+   GF   ++T++ 
Sbjct: 419 FDDALQIWHLMMKRGVAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTKSRITFNT 478

Query: 541 VMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAG 600
           ++  L   G + EAE +F +M+     PD   Y  L+D + KA NV +A++   AM +  
Sbjct: 479 MISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREP 538

Query: 601 LRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
           + P++   NSL+S   +  +L +   LL  M   GL P++ TY  L+
Sbjct: 539 ISPSIEMYNSLISGLFKSRRLVEVTDLLTEMGIRGLTPNIVTYGALI 585


>gi|299471045|emb|CBN78905.1| conserved unknown protein [Ectocarpus siliculosus]
          Length = 755

 Score =  149 bits (376), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 83/288 (28%), Positives = 141/288 (48%)

Query: 363 YTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQ 422
           + + +   G+  Q+    +LL ++   G  P+  ++N  I +  ++    EAL++ K+M 
Sbjct: 358 FNSAIVACGKGGQWEKAVELLREVTALGLTPDATSFNSAIAACTKSGRWKEALELLKEMP 417

Query: 423 VVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQ 482
               +PD ++Y + I+   K G  ++A+++ ++M   GL+P+  + ++ I   G+ G  Q
Sbjct: 418 AKRLKPDAISYNSAIEACGKGGQWEMALELRRQMPTKGLTPNVISSNIAIRACGERGRWQ 477

Query: 483 AAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVM 542
              +L  +M  QG  PN++TYN  I    K   ++ AL L   M+     PD +TY+  +
Sbjct: 478 EGLELLRQMPAQGLTPNVITYNSAIKTCGKGGQWEKALDLLAKMKELAMTPDSITYNSAI 537

Query: 543 EVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLR 602
                 G   EA A+  EM  +   PD   Y   +D +GK G   +A E    M   GL 
Sbjct: 538 AACSKRGRWKEAVALLREMPGQGLTPDVISYTAAIDAYGKNGQWERAVELLRQMPTKGLT 597

Query: 603 PNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCC 650
           PNV T NS++ A  R G+   A  LL+ +    + P L +Y L +S C
Sbjct: 598 PNVITYNSVIKACGRGGEWEKALDLLKELKETAVAPDLMSYNLAISAC 645



 Score =  144 bits (364), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 82/292 (28%), Positives = 134/292 (45%)

Query: 359 DEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVF 418
           DE +Y + +   GR  Q+  +  LL +M   G  P+ +TYN +I   G+     EAL V 
Sbjct: 214 DEISYNSAIKACGRGGQWERVIGLLREMPSVGLTPDAITYNSVITGCGKEGQWKEALSVL 273

Query: 419 KQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKA 478
            +M   G  P+ ++Y   I    ++G    A+++ ++M++ G++PD  +Y   I   G  
Sbjct: 274 TEMSAKGLTPETISYNMAIRACGRSGRWKEAVEVLRQMESQGVTPDVISYDAAIKACGGG 333

Query: 479 GHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTY 538
           G  + +  L  EM  +G  PN + +N  I    K   ++ A++L R++   G  PD  ++
Sbjct: 334 GQWETSVDLLDEMAGRGVAPNTIHFNSAIVACGKGGQWEKAVELLREVTALGLTPDATSF 393

Query: 539 SIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQ 598
           +  +      G   EA  +  EM  K   PD   Y   ++  GK G    A E    M  
Sbjct: 394 NSAIAACTKSGRWKEALELLKEMPAKRLKPDAISYNSAIEACGKGGQWEMALELRRQMPT 453

Query: 599 AGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCC 650
            GL PNV + N  + A    G+  +   LL+ M   GL P++ TY   +  C
Sbjct: 454 KGLTPNVISSNIAIRACGERGRWQEGLELLRQMPAQGLTPNVITYNSAIKTC 505



 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 85/295 (28%), Positives = 139/295 (47%)

Query: 356 FKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEAL 415
            K D  +Y + +   G+  Q+    +L  QM   G  PNV++ N  I + G      E L
Sbjct: 421 LKPDAISYNSAIEACGKGGQWEMALELRRQMPTKGLTPNVISSNIAIRACGERGRWQEGL 480

Query: 416 DVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCL 475
           ++ +QM   G  P+ +TY + I    K G  + A+D+  KM+   ++PD+ TY+  I   
Sbjct: 481 ELLRQMPAQGLTPNVITYNSAIKTCGKGGQWEKALDLLAKMKELAMTPDSITYNSAIAAC 540

Query: 476 GKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDK 535
            K G  + A  L  EM  QG  P++++Y   I    K   ++ A++L R M   G  P+ 
Sbjct: 541 SKRGRWKEAVALLREMPGQGLTPDVISYTAAIDAYGKNGQWERAVELLRQMPTKGLTPNV 600

Query: 536 VTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEA 595
           +TY+ V++  G  G  ++A  +  E++     PD   Y L +   GK G   +A +    
Sbjct: 601 ITYNSVIKACGRGGEWEKALDLLKELKETAVAPDLMSYNLAISACGKRGRWEEALDLLRE 660

Query: 596 MLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCC 650
           M   GL P+V +  S + A    G+   A  LL  M   G+ P+  +Y+L +  C
Sbjct: 661 MPAEGLTPDVISYTSAIRACNAEGEWEKALGLLNLMGAHGVSPTATSYSLAIEAC 715



 Score =  139 bits (350), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 81/298 (27%), Positives = 141/298 (47%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           G   D  TY +++   G+  Q+     +L +M   G  P  ++YN  I + GR+    EA
Sbjct: 245 GLTPDAITYNSVITGCGKEGQWKEALSVLTEMSAKGLTPETISYNMAIRACGRSGRWKEA 304

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
           ++V +QM+  G  PD ++Y   I      G  + ++D+  +M   G++P+T  ++  I  
Sbjct: 305 VEVLRQMESQGVTPDVISYDAAIKACGGGGQWETSVDLLDEMAGRGVAPNTIHFNSAIVA 364

Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPD 534
            GK G  + A +L  E+   G  P+  ++N  IA   K+  ++ AL+L ++M     +PD
Sbjct: 365 CGKGGQWEKAVELLREVTALGLTPDATSFNSAIAACTKSGRWKEALELLKEMPAKRLKPD 424

Query: 535 KVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYE 594
            ++Y+  +E  G  G  + A  +  +M  K   P+     + +   G+ G  ++  E   
Sbjct: 425 AISYNSAIEACGKGGQWEMALELRRQMPTKGLTPNVISSNIAIRACGERGRWQEGLELLR 484

Query: 595 AMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTE 652
            M   GL PNV T NS +    + GQ   A  LL  M  L + P   TY   ++ C++
Sbjct: 485 QMPAQGLTPNVITYNSAIKTCGKGGQWEKALDLLAKMKELAMTPDSITYNSAIAACSK 542



 Score =  136 bits (342), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 81/309 (26%), Positives = 148/309 (47%), Gaps = 3/309 (0%)

Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQM-VRDGCQPNVVTYNRL 401
           ALG  + ++   G     H+YTT +   GR  Q+    +LL ++  ++G  PNV  YN  
Sbjct: 129 ALGILDEMKE--GGVVCAHSYTTAITTCGRQGQWEKALELLREIPEQEGVSPNVFCYNSA 186

Query: 402 IHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGL 461
           I + G  +    A+ + ++M      PD ++Y + I    + G  +  + + ++M + GL
Sbjct: 187 IEACGSGDQWEIAVSLLREMADREVVPDEISYNSAIKACGRGGQWERVIGLLREMPSVGL 246

Query: 462 SPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALK 521
           +PD  TY+ +I   GK G  + A  +  EM  +G  P  ++YN+ I    ++  ++ A++
Sbjct: 247 TPDAITYNSVITGCGKEGQWKEALSVLTEMSAKGLTPETISYNMAIRACGRSGRWKEAVE 306

Query: 522 LYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWG 581
           + R M++ G  PD ++Y   ++  G  G  + +  +  EM  +   P+   +   +   G
Sbjct: 307 VLRQMESQGVTPDVISYDAAIKACGGGGQWETSVDLLDEMAGRGVAPNTIHFNSAIVACG 366

Query: 582 KAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQ 641
           K G   KA E    +   GL P+  + NS ++A  + G+  +A  LL+ M    LKP   
Sbjct: 367 KGGQWEKAVELLREVTALGLTPDATSFNSAIAACTKSGRWKEALELLKEMPAKRLKPDAI 426

Query: 642 TYTLLLSCC 650
           +Y   +  C
Sbjct: 427 SYNSAIEAC 435



 Score =  129 bits (325), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 73/296 (24%), Positives = 141/296 (47%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           G   D  ++ + +    ++ ++    +LL +M     +P+ ++YN  I + G+      A
Sbjct: 385 GLTPDATSFNSAIAACTKSGRWKEALELLKEMPAKRLKPDAISYNSAIEACGKGGQWEMA 444

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
           L++ +QM   G  P+ ++    I    + G     +++ ++M A GL+P+  TY+  I  
Sbjct: 445 LELRRQMPTKGLTPNVISSNIAIRACGERGRWQEGLELLRQMPAQGLTPNVITYNSAIKT 504

Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPD 534
            GK G  + A  L  +M      P+ +TYN  IA  +K   ++ A+ L R+M   G  PD
Sbjct: 505 CGKGGQWEKALDLLAKMKELAMTPDSITYNSAIAACSKRGRWKEAVALLREMPGQGLTPD 564

Query: 535 KVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYE 594
            ++Y+  ++  G  G  + A  +  +M  K   P+   Y  ++   G+ G   KA +  +
Sbjct: 565 VISYTAAIDAYGKNGQWERAVELLRQMPTKGLTPNVITYNSVIKACGRGGEWEKALDLLK 624

Query: 595 AMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCC 650
            + +  + P++ + N  +SA  + G+  +A  LL+ M   GL P + +YT  +  C
Sbjct: 625 ELKETAVAPDLMSYNLAISACGKRGRWEEALDLLREMPAEGLTPDVISYTSAIRAC 680



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 73/256 (28%), Positives = 125/256 (48%)

Query: 381 KLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIH 440
           +LL QM   G  PNV+TYN  I + G+     +ALD+  +M+ +   PD +TY + I   
Sbjct: 481 ELLRQMPAQGLTPNVITYNSAIKTCGKGGQWEKALDLLAKMKELAMTPDSITYNSAIAAC 540

Query: 441 AKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNL 500
           +K G    A+ + ++M   GL+PD  +Y+  I+  GK G  + A +L  +M  +G  PN+
Sbjct: 541 SKRGRWKEAVALLREMPGQGLTPDVISYTAAIDAYGKNGQWERAVELLRQMPTKGLTPNV 600

Query: 501 VTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAE 560
           +TYN +I    +   ++ AL L ++++     PD ++Y++ +   G  G  +EA  +  E
Sbjct: 601 ITYNSVIKACGRGGEWEKALDLLKELKETAVAPDLMSYNLAISACGKRGRWEEALDLLRE 660

Query: 561 MRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQ 620
           M  +   PD   Y   +      G   KA      M   G+ P   + +  + A  + G+
Sbjct: 661 MPAEGLTPDVISYTSAIRACNAEGEWEKALGLLNLMGAHGVSPTATSYSLAIEACGKGGR 720

Query: 621 LSDAYHLLQGMLNLGL 636
             +A  L++ M   GL
Sbjct: 721 REEAVCLVREMAQRGL 736



 Score =  115 bits (287), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 66/247 (26%), Positives = 114/247 (46%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           G   +  TY + +   G+  Q+     LL +M      P+ +TYN  I +  +     EA
Sbjct: 490 GLTPNVITYNSAIKTCGKGGQWEKALDLLAKMKELAMTPDSITYNSAIAACSKRGRWKEA 549

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
           + + ++M   G  PD ++Y   ID + K G  + A+++ ++M   GL+P+  TY+ +I  
Sbjct: 550 VALLREMPGQGLTPDVISYTAAIDAYGKNGQWERAVELLRQMPTKGLTPNVITYNSVIKA 609

Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPD 534
            G+ G  + A  L  E+      P+L++YN+ I+   K   ++ AL L R+M   G  PD
Sbjct: 610 CGRGGEWEKALDLLKELKETAVAPDLMSYNLAISACGKRGRWEEALDLLREMPAEGLTPD 669

Query: 535 KVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYE 594
            ++Y+  +      G  ++A  +   M      P    Y L ++  GK G   +A     
Sbjct: 670 VISYTSAIRACNAEGEWEKALGLLNLMGAHGVSPTATSYSLAIEACGKGGRREEAVCLVR 729

Query: 595 AMLQAGL 601
            M Q GL
Sbjct: 730 EMAQRGL 736



 Score =  107 bits (267), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 58/192 (30%), Positives = 93/192 (48%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           G   D  +YT  +   G+  Q+    +LL QM   G  PNV+TYN +I + GR     +A
Sbjct: 560 GLTPDVISYTAAIDAYGKNGQWERAVELLRQMPTKGLTPNVITYNSVIKACGRGGEWEKA 619

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
           LD+ K+++     PD ++Y   I    K G  + A+D+ ++M A GL+PD  +Y+  I  
Sbjct: 620 LDLLKELKETAVAPDLMSYNLAISACGKRGRWEEALDLLREMPAEGLTPDVISYTSAIRA 679

Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPD 534
               G  + A  L   M   G  P   +Y++ I    K    + A+ L R+M   G    
Sbjct: 680 CNAEGEWEKALGLLNLMGAHGVSPTATSYSLAIEACGKGGRREEAVCLVREMAQRGLSHR 739

Query: 535 KVTYSIVMEVLG 546
            ++ S+++E LG
Sbjct: 740 NISNSLIVEALG 751



 Score =  106 bits (265), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 67/273 (24%), Positives = 125/273 (45%), Gaps = 2/273 (0%)

Query: 382 LLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQM-QVVGCEPDRVTYCTLIDIH 440
           +LD+M ++G      +Y   I + GR     +AL++ +++ +  G  P+   Y + I+  
Sbjct: 132 ILDEM-KEGGVVCAHSYTTAITTCGRQGQWEKALELLREIPEQEGVSPNVFCYNSAIEAC 190

Query: 441 AKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNL 500
                 ++A+ + ++M    + PD  +Y+  I   G+ G  +    L  EM + G  P+ 
Sbjct: 191 GSGDQWEIAVSLLREMADREVVPDEISYNSAIKACGRGGQWERVIGLLREMPSVGLTPDA 250

Query: 501 VTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAE 560
           +TYN +I    K   ++ AL +  +M   G  P+ ++Y++ +   G  G   EA  V  +
Sbjct: 251 ITYNSVITGCGKEGQWKEALSVLTEMSAKGLTPETISYNMAIRACGRSGRWKEAVEVLRQ 310

Query: 561 MRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQ 620
           M  +   PD   Y   +   G  G    + +  + M   G+ PN    NS + A  + GQ
Sbjct: 311 MESQGVTPDVISYDAAIKACGGGGQWETSVDLLDEMAGRGVAPNTIHFNSAIVACGKGGQ 370

Query: 621 LSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEA 653
              A  LL+ +  LGL P   ++   ++ CT++
Sbjct: 371 WEKAVELLREVTALGLTPDATSFNSAIAACTKS 403


>gi|115482730|ref|NP_001064958.1| Os10g0497300 [Oryza sativa Japonica Group]
 gi|41152691|dbj|BAD08215.1| hypothetical protein [Oryza sativa Japonica Group]
 gi|113639567|dbj|BAF26872.1| Os10g0497300 [Oryza sativa Japonica Group]
 gi|215693996|dbj|BAG89195.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 794

 Score =  149 bits (376), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 91/322 (28%), Positives = 151/322 (46%), Gaps = 35/322 (10%)

Query: 362 TYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQM 421
           TY++++  L +A+      ++L  MV++G  PN  TYN ++H Y  +    EA+   K+M
Sbjct: 236 TYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKM 295

Query: 422 QVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHL 481
              G EPD VTY +L+D   K G    A  M+  M   GL P+  TY  ++      G L
Sbjct: 296 HSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGAL 355

Query: 482 QAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIV 541
              H L   MV  G  PN   ++I+I   AK      A+ ++  M+  G  PD VTY  V
Sbjct: 356 VEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTV 415

Query: 542 MEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLV------DLWGKA------------ 583
           + +L   G +++A   F +M  +   P   VY  L+      D W KA            
Sbjct: 416 IGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGI 475

Query: 584 -----------------GNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYH 626
                            G V ++ + ++ M++ G++P++ T ++L+  +   G++ +A  
Sbjct: 476 CLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATK 535

Query: 627 LLQGMLNLGLKPSLQTYTLLLS 648
           LL  M+++G+KP   TY  L++
Sbjct: 536 LLASMVSVGMKPDCVTYNTLIN 557



 Score =  147 bits (372), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 103/416 (24%), Positives = 193/416 (46%), Gaps = 5/416 (1%)

Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLI 402
           A+GF   +    G + D  TY +++  L +  +     K+ D M + G +P + TY  L+
Sbjct: 288 AIGFLKKMHSD-GVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLL 346

Query: 403 HSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLS 462
             Y     L E   +   M   G  P+   +  LI  +AK G +D AM ++ KM+  GL+
Sbjct: 347 QGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLN 406

Query: 463 PDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKL 522
           PDT TY  +I  L K+G ++ A + F +M+++   P  + YN +I        +  A +L
Sbjct: 407 PDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKEL 466

Query: 523 YRDMQNAGFEPDKVTYSIVMEVLGHC--GYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLW 580
             +M + G   D + ++ +++   HC  G + E+E +F  M R    PD   Y  L+D +
Sbjct: 467 ILEMLDRGICLDTIFFNSIID--SHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGY 524

Query: 581 GKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSL 640
             AG + +A +   +M+  G++P+  T N+L++ + ++ ++ DA  L + M + G+ P +
Sbjct: 525 CLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDI 584

Query: 641 QTYTLLLSCCTEARSPYDMGFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEM 700
            TY ++L    + R        +  +  SG    +   ++   G    N+ D      + 
Sbjct: 585 ITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQN 644

Query: 701 MHSEDRESKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAVKEKGMSYWLI 756
           +   D + +    + ++  L K G  +EA  ++   +   + PD      M+  LI
Sbjct: 645 LCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLI 700



 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 96/327 (29%), Positives = 159/327 (48%), Gaps = 4/327 (1%)

Query: 353 QAGFKHDEHTYTTMV-GILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           + GF+ D   +T ++ G+    R   A++ +L +M + GC PNV +YN L+      N  
Sbjct: 119 KKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTQLGCIPNVFSYNILLKGLCDENRS 178

Query: 412 NEALDVFKQMQVVG--CEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYS 469
            EAL++ + M   G  C PD V+Y T+I+   K G LD A   Y +M   G+ P+  TYS
Sbjct: 179 QEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYS 238

Query: 470 VIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNA 529
            II  L KA  +  A ++   MV  G +PN  TYN ++     +   + A+   + M + 
Sbjct: 239 SIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSD 298

Query: 530 GFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKA 589
           G EPD VTY+ +M+ L   G   EA  +F  M ++   P+   YG L+  +   G + + 
Sbjct: 299 GVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEM 358

Query: 590 WEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTY-TLLLS 648
               + M++ G+ PN    + L+ A+ + G++  A  +   M   GL P   TY T++  
Sbjct: 359 HGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGI 418

Query: 649 CCTEARSPYDMGFCHELMAVSGHPAHM 675
            C   R    M +  +++     P ++
Sbjct: 419 LCKSGRVEDAMRYFEQMIDERLSPGNI 445



 Score =  125 bits (313), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 73/244 (29%), Positives = 133/244 (54%)

Query: 381 KLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIH 440
           KL D MVR G +P+++TY+ LI  Y  A  ++EA  +   M  VG +PD VTY TLI+ +
Sbjct: 500 KLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGY 559

Query: 441 AKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNL 500
            K   ++ A+ ++++M+++G+SPD  TY++I+  L +     AA +L+  +   G    L
Sbjct: 560 CKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLEL 619

Query: 501 VTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAE 560
            TYNI++    K      AL++++++     + +  T++I++  L   G  DEA+ +FA 
Sbjct: 620 STYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAA 679

Query: 561 MRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQ 620
           +     VPD   Y L+ +   + G + +  + + +M + G   N    NS++   L+ G 
Sbjct: 680 LSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIVRKLLQRGD 739

Query: 621 LSDA 624
           ++ A
Sbjct: 740 ITRA 743



 Score =  105 bits (261), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 91/359 (25%), Positives = 152/359 (42%), Gaps = 5/359 (1%)

Query: 389 DGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDV 448
           D   PN+ TY  LI S   A  L+        +   G   D + +  L+           
Sbjct: 85  DEVTPNLCTYGILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSD 144

Query: 449 AMDM-YKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQG--CIPNLVTYNI 505
           AMD+  ++M   G  P+ F+Y++++  L      Q A +L   M + G  C P++V+Y  
Sbjct: 145 AMDIVLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTT 204

Query: 506 MIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKN 565
           +I    K  +   A   Y +M + G  P+ VTYS ++  L     +D+A  V   M +  
Sbjct: 205 VINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNG 264

Query: 566 WVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAY 625
            +P+   Y  +V  +  +G  ++A  + + M   G+ P+V T NSL+    + G+ ++A 
Sbjct: 265 VMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEAR 324

Query: 626 HLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGFCHELMAVSG-HPAHMFLLSMPSPG 684
            +   M   GLKP + TY  LL       +  +M    +LM  +G HP H ++ S+    
Sbjct: 325 KMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNH-YVFSILICA 383

Query: 685 PDGQNVRDHVGSFLEMMHSEDRESKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYP 743
              Q   D        M  +           V+  L KSG  E+A   +E    + + P
Sbjct: 384 YAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSP 442


>gi|356577949|ref|XP_003557083.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16390,
           chloroplastic-like [Glycine max]
          Length = 700

 Score =  149 bits (376), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 138/605 (22%), Positives = 257/605 (42%), Gaps = 74/605 (12%)

Query: 282 AGLAPFSRHFASTGNVVESVSRILRQWKWGPLAEEALGNTNYSMDAYQANQVLKQLQDHT 341
           + L   ++   S     + VS+IL          + LG+  +  DA     +L  + +  
Sbjct: 106 SSLTKLAKSLDSCNPTQQRVSQIL----------QVLGDKVFESDAVV---ILNSMVNPY 152

Query: 342 VALGFFNWLRRQAGFKHDEHT--YTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYN 399
            AL   N+   Q   K   H   Y   + +    R F    KL D+M++ G +PN  T++
Sbjct: 153 TALLAVNYYFTQK-IKPSRHVVLYNVTLKLFRAVRDFEGEEKLFDEMLQRGVKPNNFTFS 211

Query: 400 RLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAA 459
            ++      N  N+ +++F++M   G EPD +T   ++  +A +  +D A+ +Y +  A 
Sbjct: 212 TMV------NCANKPVELFEKMSGFGYEPDGITCSAMVYAYALSNNVDKAVSLYDRAIAE 265

Query: 460 GLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSA 519
               D  T+S +I     AG+     +++ EM   G  PN+VTYN ++    KA+ ++ A
Sbjct: 266 KWCLDAATFSALIKMYSMAGNYDKCLKVYQEMKVLGAKPNVVTYNTLLGAMLKAQKHRQA 325

Query: 520 LKLYRDMQNAGFEPDKVTYSIVMEV--LGHC----------------------------- 548
             +Y++M++ G  PD +TY+ ++EV  + HC                             
Sbjct: 326 KAIYKEMKSNGVSPDFITYACLLEVYTIAHCSEEALGVYKEMKGNGMDMTADLYNKLLAM 385

Query: 549 ----GYLDEAEAVFAEMRRKNWV-PDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRP 603
               GY D A  +F EM+      PD   +  ++ ++ ++G V +A      M+Q+G +P
Sbjct: 386 CADVGYTDRAAEIFYEMKSSGTCQPDSWTFSSMITMYSRSGKVSEAEGMLNEMIQSGFQP 445

Query: 604 NVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEA-RSPY-DMGF 661
            +    SL+  + +  +  D   + + +L+LG+ P+      LL+  T+  +  Y  +  
Sbjct: 446 TIFVLTSLVHCYGKAKRTDDVVKVFKQLLDLGIVPNDHFCCSLLNVLTQTPKEEYGKLTD 505

Query: 662 CHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRESKRGLVDAVVDFLH 721
           C E           +L+     G       D      E ++S D + K  L + ++D   
Sbjct: 506 CIEKANTKLGSVVKYLVEEEGDG-------DFKKEASEFLNSIDAKVKMPLCNCLIDLCV 558

Query: 722 KSGLKEEAGSVWEVAAQKNVYPDAVKEKGMSYWLINLHVMSDGTAVIALSRTLAWFRKQM 781
           K  + E A  + ++     +YP+ ++ K  + W ++L  +S G A+ AL   +    K +
Sbjct: 559 KLNVPERACDLLDLGLVLEIYPN-IQSKSQTQWSLHLKELSVGAAMTALHVWINELSKAL 617

Query: 782 LISGVGPSRIDIVTGWGR-RSRVTGTSLVRQAVQELLHMFSFPFFTENGNSGCFVGCGEP 840
                 P  + I TG G+ +    G + V ++  + LH    PF      +G F+     
Sbjct: 618 ESGEDLPPLLGINTGKGKLKYSEKGLAGVFESHLKELHA---PF--HEAKAGWFLVTKAA 672

Query: 841 LNKWL 845
              WL
Sbjct: 673 AKSWL 677


>gi|449508997|ref|XP_004163464.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
           mitochondrial-like [Cucumis sativus]
          Length = 732

 Score =  149 bits (376), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 87/284 (30%), Positives = 145/284 (51%), Gaps = 5/284 (1%)

Query: 365 TMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVV 424
            M G L  A+ F     L + M+  G QP++ TYN L+H   +   L+ A D+  +M   
Sbjct: 365 VMSGQLKEAQSF-----LNETMINFGFQPDIFTYNILMHGLCKEGSLSFARDLVNEMSRR 419

Query: 425 GCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAA 484
           GCEP+ +TY  L++   KAG L+ A  +  +M A GL+ ++  Y+ +I  L +   +  A
Sbjct: 420 GCEPNVITYAILVNGLCKAGLLEEAGLVLHEMSARGLTINSVIYNCLICALCRKEKVHVA 479

Query: 485 HQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEV 544
             L  EM  +GC P+L TYN +I    K      A +L+ +M   G   + VTY+ ++  
Sbjct: 480 LNLLSEMCTKGCKPDLFTYNSLIYGLCKVDRIDEAFRLFHNMLLDGAVANNVTYNTLIHA 539

Query: 545 LGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPN 604
           L   G   +A  +  +M  +    D+  Y  L+  + K GN+ K  E YE M+  GL  +
Sbjct: 540 LLRRGAFQKALTLVNDMLFRGCTLDKITYNGLIKAFCKVGNIEKGLELYEQMIMDGLGAD 599

Query: 605 VPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
             +CN +++   +VG++ +A+  L+  +N G  P + TY  +L+
Sbjct: 600 TISCNIMINGLCKVGKVDNAFEFLRDAINRGFVPDIVTYNSVLN 643



 Score =  140 bits (353), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 95/337 (28%), Positives = 160/337 (47%), Gaps = 8/337 (2%)

Query: 312 PLAEEALGNTNYSMDAYQANQVLKQLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILG 371
           P    A+ NT   ++ Y  +  LK+ Q       F N      GF+ D  TY  ++  L 
Sbjct: 350 PCPNNAILNT--LINGYVMSGQLKEAQS------FLNETMINFGFQPDIFTYNILMHGLC 401

Query: 372 RARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRV 431
           +         L+++M R GC+PNV+TY  L++   +A  L EA  V  +M   G   + V
Sbjct: 402 KEGSLSFARDLVNEMSRRGCEPNVITYAILVNGLCKAGLLEEAGLVLHEMSARGLTINSV 461

Query: 432 TYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEM 491
            Y  LI    +   + VA+++  +M   G  PD FTY+ +I  L K   +  A +LF  M
Sbjct: 462 IYNCLICALCRKEKVHVALNLLSEMCTKGCKPDLFTYNSLIYGLCKVDRIDEAFRLFHNM 521

Query: 492 VNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYL 551
           +  G + N VTYN +I    +   +Q AL L  DM   G   DK+TY+ +++     G +
Sbjct: 522 LLDGAVANNVTYNTLIHALLRRGAFQKALTLVNDMLFRGCTLDKITYNGLIKAFCKVGNI 581

Query: 552 DEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSL 611
           ++   ++ +M       D     ++++   K G V  A+E+    +  G  P++ T NS+
Sbjct: 582 EKGLELYEQMIMDGLGADTISCNIMINGLCKVGKVDNAFEFLRDAINRGFVPDIVTYNSV 641

Query: 612 LSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
           L+   +VG++ +A +L   +   G++P   TY   +S
Sbjct: 642 LNGLCKVGRIKEALNLFDRLQVEGVRPDAFTYNTFIS 678



 Score =  125 bits (313), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 88/340 (25%), Positives = 155/340 (45%), Gaps = 7/340 (2%)

Query: 329 QANQVLKQLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVR 388
           Q  ++L+   D    L  F  +  Q G+ H    Y   +  LG   +F  I+KLL QM  
Sbjct: 81  QLCKLLELPLDVPTLLEIFERVGGQKGYCHTFDVYYVFINKLGAIGKFKLIDKLLMQMKE 140

Query: 389 DGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVG-CEPDRVTYCTLIDIHAKAGFLD 447
           +G       +  ++  YG+A    +A+ +   M+ V  CEP   +Y  +++I        
Sbjct: 141 EGIVFRESIFMIIMKHYGKAGQPGQAIRLLLDMRAVYLCEPTFKSYDLVLEILVTGNCPQ 200

Query: 448 VAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMI 507
           VA +++  M + G+SP  FT+ +++  L     + +A  L  +M   GC+PN + Y  +I
Sbjct: 201 VATNVFYDMLSKGVSPTVFTFGIVMKALCMFNEVDSACSLLRDMTKHGCVPNSIVYQTLI 260

Query: 508 ALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWV 567
              ++      ALKL  +M   G  PD  T++ V+  L     + +A  +   M  + + 
Sbjct: 261 HALSQKNQVSEALKLLEEMFVMGCMPDVQTFNDVIHGLCKVNKIHDATKLVDRMLLRGFY 320

Query: 568 PDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHL 627
           PD   YG L+    + G + +A      +L     PN    N+L++ ++  GQL +A   
Sbjct: 321 PDNMTYGFLLHGLCRIGKLNEA----RKILIKIPCPNNAILNTLINGYVMSGQLKEAQSF 376

Query: 628 L-QGMLNLGLKPSLQTYTLLL-SCCTEARSPYDMGFCHEL 665
           L + M+N G +P + TY +L+   C E    +     +E+
Sbjct: 377 LNETMINFGFQPDIFTYNILMHGLCKEGSLSFARDLVNEM 416



 Score =  119 bits (298), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 75/274 (27%), Positives = 127/274 (46%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           G   +   Y  ++  L R  +      LL +M   GC+P++ TYN LI+   + + ++EA
Sbjct: 455 GLTINSVIYNCLICALCRKEKVHVALNLLSEMCTKGCKPDLFTYNSLIYGLCKVDRIDEA 514

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
             +F  M + G   + VTY TLI    + G    A+ +   M   G + D  TY+ +I  
Sbjct: 515 FRLFHNMLLDGAVANNVTYNTLIHALLRRGAFQKALTLVNDMLFRGCTLDKITYNGLIKA 574

Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPD 534
             K G+++   +L+ +M+  G   + ++ NIMI    K     +A +  RD  N GF PD
Sbjct: 575 FCKVGNIEKGLELYEQMIMDGLGADTISCNIMINGLCKVGKVDNAFEFLRDAINRGFVPD 634

Query: 535 KVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYE 594
            VTY+ V+  L   G + EA  +F  ++ +   PD   Y   +    K G V  A  ++ 
Sbjct: 635 IVTYNSVLNGLCKVGRIKEALNLFDRLQVEGVRPDAFTYNTFISWQCKEGMVNDACSFFY 694

Query: 595 AMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLL 628
             ++ G  P+  T N L+   L+     + + +L
Sbjct: 695 RGIENGFVPSNLTWNVLVYTLLKQSNQENNFFVL 728


>gi|83744088|gb|ABC42330.1| PPR protein [Oryza sativa Indica Group]
          Length = 791

 Score =  149 bits (376), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 90/329 (27%), Positives = 157/329 (47%), Gaps = 35/329 (10%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           G   D  TY +++  L +A+      ++L+ MV++G  P+ +TYN ++H Y  +    EA
Sbjct: 226 GILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEA 285

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTY------ 468
           +   K+M+  G EPD VTY  L+D   K G    A  ++  M   GL P+  TY      
Sbjct: 286 IGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQG 345

Query: 469 -----------------------------SVIINCLGKAGHLQAAHQLFCEMVNQGCIPN 499
                                        S++I      G +  A  +F +M  QG  PN
Sbjct: 346 YATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYANQGKVDQAMLVFSKMRQQGLNPN 405

Query: 500 LVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFA 559
            VTY  +I +  K+   + A+  +  M + G  P  + Y+ ++  L  C   + AE +  
Sbjct: 406 AVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELIL 465

Query: 560 EMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVG 619
           EM  +    +   +  ++D   K G V ++ + +E M++ G++PNV T N+L++ +   G
Sbjct: 466 EMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAG 525

Query: 620 QLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
           ++ +A  LL GM+++GLKP+  TY+ L++
Sbjct: 526 KMDEAMKLLSGMVSVGLKPNTVTYSTLIN 554



 Score =  142 bits (358), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 100/418 (23%), Positives = 191/418 (45%), Gaps = 13/418 (3%)

Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLI 402
           A+GF   +R   G + D  TY+ ++  L +  +     K+ D M + G +P + TY  L+
Sbjct: 285 AIGFLKKMRSD-GVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLL 343

Query: 403 HSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLS 462
             Y     L E   +   M   G  PD   +  LI  +A  G +D AM ++ KM+  GL+
Sbjct: 344 QGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYANQGKVDQAMLVFSKMRQQGLN 403

Query: 463 PDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKL 522
           P+  TY  +I  L K+G ++ A   F +M+++G  P  + YN +I        ++ A +L
Sbjct: 404 PNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEEL 463

Query: 523 YRDMQNAGFEPDKVTYSIVMEVLGHC--GYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLW 580
             +M + G   + + ++ +++   HC  G + E+E +F  M R    P+   Y  L++ +
Sbjct: 464 ILEMLDRGICLNTIFFNSIID--SHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGY 521

Query: 581 GKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSL 640
             AG + +A +    M+  GL+PN  T ++L++ + ++ ++ DA  L + M + G+ P +
Sbjct: 522 CLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDI 581

Query: 641 QTYTLLLSCCTEARSPYDMGFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEM 700
            TY ++L    + R        +  +  SG    +   ++   G     + D      + 
Sbjct: 582 ITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQN 641

Query: 701 MHSEDRESKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAVKEKGMSYWLINL 758
           +   D + +    + ++D L K G  +EA  ++   +   + P+        YW   L
Sbjct: 642 LCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPN--------YWTYRL 691



 Score =  135 bits (340), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 92/328 (28%), Positives = 158/328 (48%), Gaps = 5/328 (1%)

Query: 353 QAGFKHDEHTYTTMV-GILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           + GF+ D   +T ++ G+    R   A++ +L +M   GC PNV +YN L+      N  
Sbjct: 115 KKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTELGCIPNVFSYNILLKGLCDENRS 174

Query: 412 NEALDVFKQM---QVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTY 468
            EAL++   M   +  G  PD V+Y T+I+   K G  D A   Y +M   G+ PD  TY
Sbjct: 175 QEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTY 234

Query: 469 SVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQN 528
           + II  L KA  +  A ++   MV  G +P+ +TYN ++     +   + A+   + M++
Sbjct: 235 NSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRS 294

Query: 529 AGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRK 588
            G EPD VTYS++M+ L   G   EA  +F  M ++   P+   YG L+  +   G + +
Sbjct: 295 DGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVE 354

Query: 589 AWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
                + M++ G+ P+    + L+ A+   G++  A  +   M   GL P+  TY  ++ 
Sbjct: 355 MHGLLDLMVRNGIHPDHYVFSILICAYANQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIG 414

Query: 649 C-CTEARSPYDMGFCHELMAVSGHPAHM 675
             C   R    M +  +++     P ++
Sbjct: 415 ILCKSGRVEDAMLYFEQMIDEGLSPGNI 442



 Score =  122 bits (307), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 71/244 (29%), Positives = 133/244 (54%)

Query: 381 KLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIH 440
           KL + MVR G +PNV+TYN LI+ Y  A  ++EA+ +   M  VG +P+ VTY TLI+ +
Sbjct: 497 KLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGY 556

Query: 441 AKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNL 500
            K   ++ A+ ++K+M+++G+SPD  TY++I+  L +     AA +L+  +   G    L
Sbjct: 557 CKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIEL 616

Query: 501 VTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAE 560
            TYNI++    K +    AL++++++     + +  T++I+++ L   G  DEA+ +F  
Sbjct: 617 STYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVA 676

Query: 561 MRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQ 620
                 VP+   Y L+ +     G + +  + + +M   G   +    N ++   L+ G+
Sbjct: 677 FSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQRGE 736

Query: 621 LSDA 624
           ++ A
Sbjct: 737 ITRA 740



 Score =  122 bits (306), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 77/295 (26%), Positives = 142/295 (48%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           RQ G   +  TY  ++GIL ++ +        +QM+ +G  P  + YN LIH     N  
Sbjct: 398 RQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKW 457

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
             A ++  +M   G   + + + ++ID H K G +  +  +++ M   G+ P+  TY+ +
Sbjct: 458 ERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTL 517

Query: 472 INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF 531
           IN    AG +  A +L   MV+ G  PN VTY+ +I    K    + AL L+++M+++G 
Sbjct: 518 INGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGV 577

Query: 532 EPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWE 591
            PD +TY+I+++ L        A+ ++  +       +   Y +++    K      A +
Sbjct: 578 SPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQ 637

Query: 592 WYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLL 646
            ++ +    L+    T N ++ A L+VG+  +A  L     + GL P+  TY L+
Sbjct: 638 MFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLM 692



 Score =  102 bits (254), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 80/290 (27%), Positives = 132/290 (45%), Gaps = 14/290 (4%)

Query: 382 LLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCE---PDRVTYCTLID 438
           + D+++R G   ++   NR +    R +    A+  + +M   G +   PD  TY  LI 
Sbjct: 37  VFDELLRRGRGASIYGLNRALADVAR-DSPAAAVSRYNRMARAGADEVTPDLCTYGILIG 95

Query: 439 IHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFC-EMVNQGCI 497
              +AG LD+       +   G   D   ++ ++  L        A  +    M   GCI
Sbjct: 96  CCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTELGCI 155

Query: 498 PNLVTYNIMIALQAKARNYQSALKLYR---DMQNAGFEPDKVTYSIVMEVLGHCGYLDEA 554
           PN+ +YNI++         Q AL+L     D +  G  PD V+Y+ V+      G  D+A
Sbjct: 156 PNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEGDSDKA 215

Query: 555 EAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSA 614
            + + EM  +  +PD   Y  ++    KA  + KA E    M++ G+ P+  T NS+L  
Sbjct: 216 YSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHG 275

Query: 615 FLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS--C----CTEARSPYD 658
           +   GQ  +A   L+ M + G++P + TY+LL+   C    C EAR  +D
Sbjct: 276 YCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFD 325



 Score = 63.2 bits (152), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 42/165 (25%), Positives = 79/165 (47%), Gaps = 1/165 (0%)

Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLI 402
           AL  F  +   +G   D  TY  ++  L + R+  A  +L  ++   G Q  + TYN ++
Sbjct: 565 ALVLFKEME-SSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIIL 623

Query: 403 HSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLS 462
           H   +    ++AL +F+ + ++  + +  T+  +ID   K G  D A D++    + GL 
Sbjct: 624 HGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLV 683

Query: 463 PDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMI 507
           P+ +TY ++   +   G L+   QLF  M + GC  +    N ++
Sbjct: 684 PNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIV 728


>gi|46091165|dbj|BAD13711.1| PPR protein [Oryza sativa Indica Group]
          Length = 794

 Score =  149 bits (376), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 91/322 (28%), Positives = 151/322 (46%), Gaps = 35/322 (10%)

Query: 362 TYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQM 421
           TY++++  L +A+      ++L  MV++G  PN  TYN ++H Y  +    EA+   K+M
Sbjct: 236 TYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKM 295

Query: 422 QVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHL 481
              G EPD VTY +L+D   K G    A  M+  M   GL P+  TY  ++      G L
Sbjct: 296 HSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGAL 355

Query: 482 QAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIV 541
              H L   MV  G  PN   ++I+I   AK      A+ ++  M+  G  PD VTY  V
Sbjct: 356 VEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTV 415

Query: 542 MEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLV------DLWGKA------------ 583
           + +L   G +++A   F +M  +   P   VY  L+      D W KA            
Sbjct: 416 IGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGI 475

Query: 584 -----------------GNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYH 626
                            G V ++ + ++ M++ G++P++ T ++L+  +   G++ +A  
Sbjct: 476 CLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATK 535

Query: 627 LLQGMLNLGLKPSLQTYTLLLS 648
           LL  M+++G+KP   TY  L++
Sbjct: 536 LLASMVSVGMKPDCVTYNTLIN 557



 Score =  147 bits (372), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 103/416 (24%), Positives = 193/416 (46%), Gaps = 5/416 (1%)

Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLI 402
           A+GF   +    G + D  TY +++  L +  +     K+ D M + G +P + TY  L+
Sbjct: 288 AIGFLKKMHSD-GVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLL 346

Query: 403 HSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLS 462
             Y     L E   +   M   G  P+   +  LI  +AK G +D AM ++ KM+  GL+
Sbjct: 347 QGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLN 406

Query: 463 PDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKL 522
           PDT TY  +I  L K+G ++ A + F +M+++   P  + YN +I        +  A +L
Sbjct: 407 PDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKEL 466

Query: 523 YRDMQNAGFEPDKVTYSIVMEVLGHC--GYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLW 580
             +M + G   D + ++ +++   HC  G + E+E +F  M R    PD   Y  L+D +
Sbjct: 467 ILEMLDRGICLDTIFFNSIID--SHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGY 524

Query: 581 GKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSL 640
             AG + +A +   +M+  G++P+  T N+L++ + ++ ++ DA  L + M + G+ P +
Sbjct: 525 CLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDI 584

Query: 641 QTYTLLLSCCTEARSPYDMGFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEM 700
            TY ++L    + R        +  +  SG    +   ++   G    N+ D      + 
Sbjct: 585 ITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQN 644

Query: 701 MHSEDRESKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAVKEKGMSYWLI 756
           +   D + +    + ++  L K G  +EA  ++   +   + PD      M+  LI
Sbjct: 645 LCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLI 700



 Score =  143 bits (361), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 97/327 (29%), Positives = 158/327 (48%), Gaps = 4/327 (1%)

Query: 353 QAGFKHDEHTYTTMV-GILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           + GF  D   +T M+ G+    R   A++ +L +M + GC PNV +YN L+      N  
Sbjct: 119 KKGFIVDAIAFTPMLKGLCADKRTSDAMDIVLRRMTQLGCIPNVFSYNILLKGLCDDNRS 178

Query: 412 NEALDVFKQMQVVG--CEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYS 469
            EAL++ + M   G  C PD V+Y T+I+   K G LD A   Y +M   G+ P+  TYS
Sbjct: 179 QEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYS 238

Query: 470 VIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNA 529
            II  L KA  +  A ++   MV  G +PN  TYN ++     +   + A+   + M + 
Sbjct: 239 SIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSD 298

Query: 530 GFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKA 589
           G EPD VTY+ +M+ L   G   EA  +F  M ++   P+   YG L+  +   G + + 
Sbjct: 299 GVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEM 358

Query: 590 WEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTY-TLLLS 648
               + M++ G+ PN    + L+ A+ + G++  A  +   M   GL P   TY T++  
Sbjct: 359 HGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGI 418

Query: 649 CCTEARSPYDMGFCHELMAVSGHPAHM 675
            C   R    M +  +++     P ++
Sbjct: 419 LCKSGRVEDAMRYFEQMIDERLSPGNI 445



 Score =  125 bits (313), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 73/244 (29%), Positives = 133/244 (54%)

Query: 381 KLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIH 440
           KL D MVR G +P+++TY+ LI  Y  A  ++EA  +   M  VG +PD VTY TLI+ +
Sbjct: 500 KLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGY 559

Query: 441 AKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNL 500
            K   ++ A+ ++++M+++G+SPD  TY++I+  L +     AA +L+  +   G    L
Sbjct: 560 CKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLEL 619

Query: 501 VTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAE 560
            TYNI++    K      AL++++++     + +  T++I++  L   G  DEA+ +FA 
Sbjct: 620 STYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAA 679

Query: 561 MRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQ 620
           +     VPD   Y L+ +   + G + +  + + +M + G   N    NS++   L+ G 
Sbjct: 680 LSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIVRKLLQRGD 739

Query: 621 LSDA 624
           ++ A
Sbjct: 740 ITRA 743



 Score =  101 bits (251), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 89/359 (24%), Positives = 152/359 (42%), Gaps = 5/359 (1%)

Query: 389 DGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDV 448
           D   PN+ TY  L+ S   A  L+        +   G   D + +  ++           
Sbjct: 85  DEVTPNLCTYGILMGSCCCAGRLDLGFAALGNVIKKGFIVDAIAFTPMLKGLCADKRTSD 144

Query: 449 AMDM-YKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQG--CIPNLVTYNI 505
           AMD+  ++M   G  P+ F+Y++++  L      Q A +L   M + G  C P++V+Y  
Sbjct: 145 AMDIVLRRMTQLGCIPNVFSYNILLKGLCDDNRSQEALELLQMMPDDGGDCPPDVVSYTT 204

Query: 506 MIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKN 565
           +I    K  +   A   Y +M + G  P+ VTYS ++  L     +D+A  V   M +  
Sbjct: 205 VINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNG 264

Query: 566 WVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAY 625
            +P+   Y  +V  +  +G  ++A  + + M   G+ P+V T NSL+    + G+ ++A 
Sbjct: 265 VMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEAR 324

Query: 626 HLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGFCHELMAVSG-HPAHMFLLSMPSPG 684
            +   M   GLKP + TY  LL       +  +M    +LM  +G HP H ++ S+    
Sbjct: 325 KMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNH-YVFSILICA 383

Query: 685 PDGQNVRDHVGSFLEMMHSEDRESKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYP 743
              Q   D        M  +           V+  L KSG  E+A   +E    + + P
Sbjct: 384 YAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSP 442


>gi|357145546|ref|XP_003573680.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Brachypodium distachyon]
          Length = 739

 Score =  149 bits (376), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 98/330 (29%), Positives = 154/330 (46%), Gaps = 35/330 (10%)

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
           +AGF  D H YT+ V    RA       +L   M   GC     TY  L+H    A  + 
Sbjct: 100 RAGFAPDSHAYTSFVVGYCRAGLLAHACRLFVLMPLRGCVRTAFTYTALLHGLCGAGMVR 159

Query: 413 EALDVFKQMQVVGC-----------------------------------EPDRVTYCTLI 437
           EA+ VF  MQ  GC                                   EP+ V Y  LI
Sbjct: 160 EAMSVFAGMQADGCAPDPHVYATMVHGLCGAGRTREAETLLSDAMAEGFEPNVVVYNALI 219

Query: 438 DIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCI 497
           D +   G L++A+D++++M   G SP+  TY+ +I+   K+  L  A  LF  MV+ G +
Sbjct: 220 DGYCNVGDLELAVDVFERMDVNGCSPNVRTYTELISGFCKSRKLDRAMMLFSRMVDAGLV 279

Query: 498 PNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAV 557
           PN+VTY  +I  Q        A +L + M+N+G  P++ T S++++ L     + EA+ +
Sbjct: 280 PNVVTYTALIQGQCSDGQLDCAYRLLQSMENSGLVPNEWTCSVLIDALCKHERVGEAQLL 339

Query: 558 FAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLR 617
              + +K    +E VY  L+D   KAG    A    + ++  G  P+  T +SL+    R
Sbjct: 340 LGSLIQKGIKVNEIVYTSLIDGLCKAGRFAAADRLMQTLVSQGFVPDAHTYSSLIDGLCR 399

Query: 618 VGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
             +LS+A  +L  M+  G++PS  TYT+++
Sbjct: 400 QKELSEAMLVLDDMMEKGVQPSPVTYTIII 429



 Score =  142 bits (357), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 100/329 (30%), Positives = 152/329 (46%), Gaps = 37/329 (11%)

Query: 355 GFKHDEHTYTTMV-GILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNE 413
           G   D H Y TMV G+ G  R   A   L D M  +G +PNVV YN LI  Y     L  
Sbjct: 172 GCAPDPHVYATMVHGLCGAGRTREAETLLSDAMA-EGFEPNVVVYNALIDGYCNVGDLEL 230

Query: 414 ALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIIN 473
           A+DVF++M V GC P+  TY  LI    K+  LD AM ++ +M  AGL P+  TY+ +I 
Sbjct: 231 AVDVFERMDVNGCSPNVRTYTELISGFCKSRKLDRAMMLFSRMVDAGLVPNVVTYTALIQ 290

Query: 474 CLGKAGHLQAAHQLFCEMVNQGCIP----------------------------------- 498
                G L  A++L   M N G +P                                   
Sbjct: 291 GQCSDGQLDCAYRLLQSMENSGLVPNEWTCSVLIDALCKHERVGEAQLLLGSLIQKGIKV 350

Query: 499 NLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVF 558
           N + Y  +I    KA  + +A +L + + + GF PD  TYS +++ L     L EA  V 
Sbjct: 351 NEIVYTSLIDGLCKAGRFAAADRLMQTLVSQGFVPDAHTYSSLIDGLCRQKELSEAMLVL 410

Query: 559 AEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRV 618
            +M  K   P    Y +++D   +      + +  + M+ AG++P+V T    + ++   
Sbjct: 411 DDMMEKGVQPSPVTYTIIIDELVREVGADGSKKILDKMIAAGIKPDVFTYTIFVRSYCHE 470

Query: 619 GQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
           G++ DA H++  M++ G+ P+L TY  L+
Sbjct: 471 GRMEDAEHMMLHMVDHGVCPNLVTYNALI 499



 Score =  138 bits (348), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 103/395 (26%), Positives = 177/395 (44%), Gaps = 27/395 (6%)

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
           Q G K +E  YT+++  L +A +F A ++L+  +V  G  P+  TY+ LI    R   L+
Sbjct: 345 QKGIKVNEIVYTSLIDGLCKAGRFAAADRLMQTLVSQGFVPDAHTYSSLIDGLCRQKELS 404

Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
           EA+ V   M   G +P  VTY  +ID   +    D +  +  KM AAG+ PD FTY++ +
Sbjct: 405 EAMLVLDDMMEKGVQPSPVTYTIIIDELVREVGADGSKKILDKMIAAGIKPDVFTYTIFV 464

Query: 473 NCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFE 532
                 G ++ A  +   MV+ G  PNLVTYN +I   A       A   ++ M   G +
Sbjct: 465 RSYCHEGRMEDAEHMMLHMVDHGVCPNLVTYNALICGYANLGLTSQAFSTFKHMVANGCK 524

Query: 533 PDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEW 592
           P++ +Y++++ +L              +    N +P        V +W K   ++     
Sbjct: 525 PNEESYTVLLRLL-------------IKKESSNNIPANS-----VSIW-KIAEMKYLHGL 565

Query: 593 YEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTE 652
            E M++  L   +   N  L++  RV +L +A  LL  M +  L PS   YT +++CC  
Sbjct: 566 LEEMVKLQLPSEIDIYNCFLTSLCRVDRLDEAKILLIEMQSANLTPSEDVYTSIIACCCR 625

Query: 653 ARSPYDMGFCHELMAVSGH----PAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRES 708
            +   +     + M  SG+     ++  ++S        Q  +   G  L   ++ +  +
Sbjct: 626 LKMLTEALTFVDSMVKSGYIPQLESYRHIISSLCEEGSIQTAKQVFGDMLSKEYNYEEIA 685

Query: 709 KRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYP 743
            R L+D ++    + G   E  S+  V  +KN  P
Sbjct: 686 WRILIDGLL----QKGYVAECSSLLSVMEEKNYRP 716



 Score =  119 bits (298), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 81/293 (27%), Positives = 138/293 (47%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           G   +  TYT ++    ++R+      L  +MV  G  PNVVTY  LI        L+ A
Sbjct: 242 GCSPNVRTYTELISGFCKSRKLDRAMMLFSRMVDAGLVPNVVTYTALIQGQCSDGQLDCA 301

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
             + + M+  G  P+  T   LID   K   +  A  +   +   G+  +   Y+ +I+ 
Sbjct: 302 YRLLQSMENSGLVPNEWTCSVLIDALCKHERVGEAQLLLGSLIQKGIKVNEIVYTSLIDG 361

Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPD 534
           L KAG   AA +L   +V+QG +P+  TY+ +I    + +    A+ +  DM   G +P 
Sbjct: 362 LCKAGRFAAADRLMQTLVSQGFVPDAHTYSSLIDGLCRQKELSEAMLVLDDMMEKGVQPS 421

Query: 535 KVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYE 594
            VTY+I+++ L      D ++ +  +M      PD   Y + V  +   G +  A     
Sbjct: 422 PVTYTIIIDELVREVGADGSKKILDKMIAAGIKPDVFTYTIFVRSYCHEGRMEDAEHMML 481

Query: 595 AMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
            M+  G+ PN+ T N+L+  +  +G  S A+   + M+  G KP+ ++YT+LL
Sbjct: 482 HMVDHGVCPNLVTYNALICGYANLGLTSQAFSTFKHMVANGCKPNEESYTVLL 534



 Score =  117 bits (294), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 80/286 (27%), Positives = 133/286 (46%)

Query: 362 TYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQM 421
           TYTT++     A    A  + L  ++R G  P+   Y   +  Y RA  L  A  +F  M
Sbjct: 74  TYTTLINAYCLAGDLPASKRHLSSLLRAGFAPDSHAYTSFVVGYCRAGLLAHACRLFVLM 133

Query: 422 QVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHL 481
            + GC     TY  L+     AG +  AM ++  MQA G +PD   Y+ +++ L  AG  
Sbjct: 134 PLRGCVRTAFTYTALLHGLCGAGMVREAMSVFAGMQADGCAPDPHVYATMVHGLCGAGRT 193

Query: 482 QAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIV 541
           + A  L  + + +G  PN+V YN +I       + + A+ ++  M   G  P+  TY+ +
Sbjct: 194 REAETLLSDAMAEGFEPNVVVYNALIDGYCNVGDLELAVDVFERMDVNGCSPNVRTYTEL 253

Query: 542 MEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGL 601
           +        LD A  +F+ M     VP+   Y  L+      G +  A+   ++M  +GL
Sbjct: 254 ISGFCKSRKLDRAMMLFSRMVDAGLVPNVVTYTALIQGQCSDGQLDCAYRLLQSMENSGL 313

Query: 602 RPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
            PN  TC+ L+ A  +  ++ +A  LL  ++  G+K +   YT L+
Sbjct: 314 VPNEWTCSVLIDALCKHERVGEAQLLLGSLIQKGIKVNEIVYTSLI 359



 Score =  106 bits (264), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 77/254 (30%), Positives = 119/254 (46%)

Query: 394 NVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMY 453
           N+ TY  LI++Y  A  L  +      +   G  PD   Y + +  + +AG L  A  ++
Sbjct: 71  NLRTYTTLINAYCLAGDLPASKRHLSSLLRAGFAPDSHAYTSFVVGYCRAGLLAHACRLF 130

Query: 454 KKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKA 513
             M   G     FTY+ +++ L  AG ++ A  +F  M   GC P+   Y  M+     A
Sbjct: 131 VLMPLRGCVRTAFTYTALLHGLCGAGMVREAMSVFAGMQADGCAPDPHVYATMVHGLCGA 190

Query: 514 RNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVY 573
              + A  L  D    GFEP+ V Y+ +++   + G L+ A  VF  M      P+   Y
Sbjct: 191 GRTREAETLLSDAMAEGFEPNVVVYNALIDGYCNVGDLELAVDVFERMDVNGCSPNVRTY 250

Query: 574 GLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLN 633
             L+  + K+  + +A   +  M+ AGL PNV T  +L+      GQL  AY LLQ M N
Sbjct: 251 TELISGFCKSRKLDRAMMLFSRMVDAGLVPNVVTYTALIQGQCSDGQLDCAYRLLQSMEN 310

Query: 634 LGLKPSLQTYTLLL 647
            GL P+  T ++L+
Sbjct: 311 SGLVPNEWTCSVLI 324



 Score = 90.1 bits (222), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 70/286 (24%), Positives = 116/286 (40%), Gaps = 51/286 (17%)

Query: 354 AGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNE 413
           AG K D  TYT  V       +      ++  MV  G  PN+VTYN LI  Y      ++
Sbjct: 451 AGIKPDVFTYTIFVRSYCHEGRMEDAEHMMLHMVDHGVCPNLVTYNALICGYANLGLTSQ 510

Query: 414 ALDVFKQMQVVGCEPDRVTYCTL------------------------------------- 436
           A   FK M   GC+P+  +Y  L                                     
Sbjct: 511 AFSTFKHMVANGCKPNEESYTVLLRLLIKKESSNNIPANSVSIWKIAEMKYLHGLLEEMV 570

Query: 437 -------IDIH-------AKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQ 482
                  IDI+        +   LD A  +  +MQ+A L+P    Y+ II C  +   L 
Sbjct: 571 KLQLPSEIDIYNCFLTSLCRVDRLDEAKILLIEMQSANLTPSEDVYTSIIACCCRLKMLT 630

Query: 483 AAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVM 542
            A      MV  G IP L +Y  +I+   +  + Q+A +++ DM +  +  +++ + I++
Sbjct: 631 EALTFVDSMVKSGYIPQLESYRHIISSLCEEGSIQTAKQVFGDMLSKEYNYEEIAWRILI 690

Query: 543 EVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRK 588
           + L   GY+ E  ++ + M  KN+ P + +Y  L      A ++++
Sbjct: 691 DGLLQKGYVAECSSLLSVMEEKNYRPSDALYARLTGKITDANDIQE 736



 Score = 74.3 bits (181), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 53/182 (29%), Positives = 82/182 (45%)

Query: 467 TYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDM 526
           TY+ +IN    AG L A+ +    ++  G  P+   Y   +    +A     A +L+  M
Sbjct: 74  TYTTLINAYCLAGDLPASKRHLSSLLRAGFAPDSHAYTSFVVGYCRAGLLAHACRLFVLM 133

Query: 527 QNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNV 586
              G      TY+ ++  L   G + EA +VFA M+     PD  VY  +V     AG  
Sbjct: 134 PLRGCVRTAFTYTALLHGLCGAGMVREAMSVFAGMQADGCAPDPHVYATMVHGLCGAGRT 193

Query: 587 RKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLL 646
           R+A       +  G  PNV   N+L+  +  VG L  A  + + M   G  P+++TYT L
Sbjct: 194 REAETLLSDAMAEGFEPNVVVYNALIDGYCNVGDLELAVDVFERMDVNGCSPNVRTYTEL 253

Query: 647 LS 648
           +S
Sbjct: 254 IS 255


>gi|359492357|ref|XP_002284592.2| PREDICTED: pentatricopeptide repeat-containing protein At1g77360,
           mitochondrial-like [Vitis vinifera]
          Length = 476

 Score =  149 bits (376), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 88/316 (27%), Positives = 164/316 (51%), Gaps = 4/316 (1%)

Query: 333 VLKQLQDH-TVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGC 391
           VLK+ ++   +A  FF W  +Q  + H    Y TM+  L + RQ+  +  L+++M R   
Sbjct: 49  VLKRFENAGMLAYQFFEWAGKQRNYTHSIRAYHTMIESLAKIRQYQIMWDLVNKM-RSLK 107

Query: 392 QPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMD 451
             NV T+  ++  Y R+  + EA+  F  M+     P+   + +L+    K+  +  A +
Sbjct: 108 ILNVETFCIIMRKYARSQKVKEAVYTFNIMEKYDVPPNLAAFNSLLSALCKSKNVVKAQE 167

Query: 452 MYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQA 511
           ++  M+   + PD+ TYS+++   GKA +L  A ++F EMV+ GC P++VTY IM+ +  
Sbjct: 168 IFNGMKDQFI-PDSKTYSILLEGWGKAPNLPKAREIFREMVDMGCDPDIVTYGIMVDILC 226

Query: 512 KARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEP 571
           KA     A+ + ++M ++  +P    YS+++   G    +++A   F +M R     D  
Sbjct: 227 KAGRVDEAVGIVKEMDSSVCKPTSFIYSVLVHTYGIENRIEDAVYTFLDMERNEIEADVA 286

Query: 572 VYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGM 631
           VY  L+  + K   ++ A+     M   G+RPN  TCN +L++ +  G   +A+ + + M
Sbjct: 287 VYNALIGAFCKVNKLKNAYRVLNEMDCKGIRPNSRTCNIILNSLISCGDTDEAFRVFRRM 346

Query: 632 LNLGLKPSLQTYTLLL 647
           + +   P   TYT+++
Sbjct: 347 IKV-CDPDADTYTMMI 361



 Score =  124 bits (310), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 82/312 (26%), Positives = 146/312 (46%), Gaps = 36/312 (11%)

Query: 363 YTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQ 422
           + +++  L +++      ++ + M +D   P+  TY+ L+  +G+A  L +A ++F++M 
Sbjct: 149 FNSLLSALCKSKNVVKAQEIFNGM-KDQFIPDSKTYSILLEGWGKAPNLPKAREIFREMV 207

Query: 423 VVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQ 482
            +GC+PD VTY  ++DI  KAG +D A+ + K+M ++   P +F YSV+++  G    ++
Sbjct: 208 DMGCDPDIVTYGIMVDILCKAGRVDEAVGIVKEMDSSVCKPTSFIYSVLVHTYGIENRIE 267

Query: 483 AAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVM 542
            A   F +M       ++  YN +I    K    ++A ++  +M   G  P+  T +I++
Sbjct: 268 DAVYTFLDMERNEIEADVAVYNALIGAFCKVNKLKNAYRVLNEMDCKGIRPNSRTCNIIL 327

Query: 543 EVLGHCGYLDEAEAVFAEM----------------------------------RRKNWVP 568
             L  CG  DEA  VF  M                                  R K +VP
Sbjct: 328 NSLISCGDTDEAFRVFRRMIKVCDPDADTYTMMIKMFCENDKLEMALKVWKYMRLKQFVP 387

Query: 569 DEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLL 628
               + +L++   K GN  KA    E M++ G+RP+  T   L    ++ G+  D    L
Sbjct: 388 SMHTFSVLINGLCKKGNASKACILLEEMIEKGIRPSSVTFGKLKQLLIKEGR-EDVLEFL 446

Query: 629 QGMLNLGLKPSL 640
           Q  +NL +K  L
Sbjct: 447 QEKMNLLVKEPL 458



 Score = 73.6 bits (179), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 44/145 (30%), Positives = 76/145 (52%), Gaps = 1/145 (0%)

Query: 359 DEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVF 418
           D   Y  ++G   +  +     ++L++M   G +PN  T N +++S       +EA  VF
Sbjct: 284 DVAVYNALIGAFCKVNKLKNAYRVLNEMDCKGIRPNSRTCNIILNSLISCGDTDEAFRVF 343

Query: 419 KQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKA 478
           ++M  V C+PD  TY  +I +  +   L++A+ ++K M+     P   T+SV+IN L K 
Sbjct: 344 RRMIKV-CDPDADTYTMMIKMFCENDKLEMALKVWKYMRLKQFVPSMHTFSVLINGLCKK 402

Query: 479 GHLQAAHQLFCEMVNQGCIPNLVTY 503
           G+   A  L  EM+ +G  P+ VT+
Sbjct: 403 GNASKACILLEEMIEKGIRPSSVTF 427


>gi|356551209|ref|XP_003543970.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960,
           mitochondrial-like [Glycine max]
          Length = 687

 Score =  149 bits (376), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 95/293 (32%), Positives = 147/293 (50%)

Query: 362 TYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQM 421
           TY T++  L +  +     KLLD MV     P++V+YN LI+ Y R   + EA  +F ++
Sbjct: 309 TYNTIMYGLCKWGRVSDARKLLDVMVNKNLMPDLVSYNTLIYGYTRLGNIGEAFLLFAEL 368

Query: 422 QVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHL 481
           +     P  VTY TLID   + G LDVAM +  +M   G  PD FT++  +    K G+L
Sbjct: 369 RYRSLAPSVVTYNTLIDGLCRLGDLDVAMRLKDEMIKHGPDPDVFTFTTFVRGFCKMGNL 428

Query: 482 QAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIV 541
             A +LF EM+N+G  P+   Y   I  + K  +   A  +  +M   GF PD +TY++ 
Sbjct: 429 PMAKELFDEMLNRGLQPDRFAYITRIVGELKLGDPSKAFGMQEEMLARGFPPDLITYNVF 488

Query: 542 MEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGL 601
           ++ L   G L EA  +  +M     VPD   Y  ++     AG++RKA   +  ML  G+
Sbjct: 489 IDGLHKLGNLKEASELVKKMLYNGLVPDHVTYTSIIHAHLMAGHLRKARALFLEMLSKGI 548

Query: 602 RPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEAR 654
            P+V T   L+ ++   G+L  A      M   G+ P++ TY  L++   + R
Sbjct: 549 FPSVVTYTVLIHSYAVRGRLKLAILHFFEMHEKGVHPNVITYNALINGLCKVR 601



 Score =  139 bits (349), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 82/258 (31%), Positives = 134/258 (51%)

Query: 386 MVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGF 445
           MV  G  P VVTYN ++ S+ +   + EAL +  QMQ +GC P+ VTY  L++  + +G 
Sbjct: 193 MVECGICPTVVTYNTMLDSFCKKGMVQEALQLLFQMQAMGCSPNDVTYNVLVNGLSHSGE 252

Query: 446 LDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNI 505
           ++ A ++ + M   GL    +TY  +I    + G ++ A +L  EM+++G +P +VTYN 
Sbjct: 253 MEQAKELIQDMLRLGLEVSVYTYDPLIRGYCEKGQIEEASRLGEEMLSRGAVPTVVTYNT 312

Query: 506 MIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKN 565
           ++    K      A KL   M N    PD V+Y+ ++      G + EA  +FAE+R ++
Sbjct: 313 IMYGLCKWGRVSDARKLLDVMVNKNLMPDLVSYNTLIYGYTRLGNIGEAFLLFAELRYRS 372

Query: 566 WVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAY 625
             P    Y  L+D   + G++  A    + M++ G  P+V T  + +  F ++G L  A 
Sbjct: 373 LAPSVVTYNTLIDGLCRLGDLDVAMRLKDEMIKHGPDPDVFTFTTFVRGFCKMGNLPMAK 432

Query: 626 HLLQGMLNLGLKPSLQTY 643
            L   MLN GL+P    Y
Sbjct: 433 ELFDEMLNRGLQPDRFAY 450



 Score =  134 bits (336), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 89/290 (30%), Positives = 142/290 (48%)

Query: 359 DEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVF 418
           D  +Y T++    R    G    L  ++      P+VVTYN LI    R   L+ A+ + 
Sbjct: 341 DLVSYNTLIYGYTRLGNIGEAFLLFAELRYRSLAPSVVTYNTLIDGLCRLGDLDVAMRLK 400

Query: 419 KQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKA 478
            +M   G +PD  T+ T +    K G L +A +++ +M   GL PD F Y   I    K 
Sbjct: 401 DEMIKHGPDPDVFTFTTFVRGFCKMGNLPMAKELFDEMLNRGLQPDRFAYITRIVGELKL 460

Query: 479 GHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTY 538
           G    A  +  EM+ +G  P+L+TYN+ I    K  N + A +L + M   G  PD VTY
Sbjct: 461 GDPSKAFGMQEEMLARGFPPDLITYNVFIDGLHKLGNLKEASELVKKMLYNGLVPDHVTY 520

Query: 539 SIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQ 598
           + ++      G+L +A A+F EM  K   P    Y +L+  +   G ++ A   +  M +
Sbjct: 521 TSIIHAHLMAGHLRKARALFLEMLSKGIFPSVVTYTVLIHSYAVRGRLKLAILHFFEMHE 580

Query: 599 AGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
            G+ PNV T N+L++   +V ++  AY+    M   G+ P+  TYT+L++
Sbjct: 581 KGVHPNVITYNALINGLCKVRKMDQAYNFFAEMQAKGISPNKYTYTILIN 630



 Score =  132 bits (332), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 131/524 (25%), Positives = 217/524 (41%), Gaps = 78/524 (14%)

Query: 341 TVALGFFNWLRRQAGFKHDEHTYTTMVGILGR-----------------ARQFGAINK-- 381
            VAL FF W  RQ GFK  E +Y+ ++ IL R                   + G I+   
Sbjct: 62  VVALRFFRWAERQTGFKRSEISYSVILDILARNGLMRSAYCVMEKVVSVKMENGVIDVVS 121

Query: 382 -----------LLD--------------------QMVRDGCQPNVVTYNRLIHSY-GRAN 409
                      +LD                    +MV  G  P+V   NR++     R N
Sbjct: 122 SSEVSMPSVKLILDLLLWIYVKKSLLEKCLLVFYKMVSKGLLPDVKNCNRVLRLLRDRDN 181

Query: 410 YLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYS 469
            ++ A +V+  M   G  P  VTY T++D   K G +  A+ +  +MQA G SP+  TY+
Sbjct: 182 NIDVAREVYNVMVECGICPTVVTYNTMLDSFCKKGMVQEALQLLFQMQAMGCSPNDVTYN 241

Query: 470 VIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNA 529
           V++N L  +G ++ A +L  +M+  G   ++ TY+ +I    +    + A +L  +M + 
Sbjct: 242 VLVNGLSHSGEMEQAKELIQDMLRLGLEVSVYTYDPLIRGYCEKGQIEEASRLGEEMLSR 301

Query: 530 GFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKA 589
           G  P  VTY+ +M  L   G + +A  +   M  KN +PD   Y  L+  + + GN+ +A
Sbjct: 302 GAVPTVVTYNTIMYGLCKWGRVSDARKLLDVMVNKNLMPDLVSYNTLIYGYTRLGNIGEA 361

Query: 590 WEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL-S 648
           +  +  +    L P+V T N+L+    R+G L  A  L   M+  G  P + T+T  +  
Sbjct: 362 FLLFAELRYRSLAPSVVTYNTLIDGLCRLGDLDVAMRLKDEMIKHGPDPDVFTFTTFVRG 421

Query: 649 CCTEARSPYDMGFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRES 708
            C     P       E++     P     ++         +     G   EM+       
Sbjct: 422 FCKMGNLPMAKELFDEMLNRGLQPDRFAYITRIVGELKLGDPSKAFGMQEEML------- 474

Query: 709 KRGL------VDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAVKEKGMSYWLINLHVMS 762
            RG        +  +D LHK G  +EA  + +      + PD V        +I+ H+M+
Sbjct: 475 ARGFPPDLITYNVFIDGLHKLGNLKEASELVKKMLYNGLVPDHVTYTS----IIHAHLMA 530

Query: 763 DGTAVIALSRTLAWFRKQMLISGVGPSRID---IVTGWGRRSRV 803
                  L +  A F  +ML  G+ PS +    ++  +  R R+
Sbjct: 531 G-----HLRKARALFL-EMLSKGIFPSVVTYTVLIHSYAVRGRL 568



 Score =  129 bits (323), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 97/347 (27%), Positives = 162/347 (46%), Gaps = 9/347 (2%)

Query: 309 KWGPLAE-----EALGNTNYSMDAYQANQVL---KQLQDHTVALGFFNWLRRQAGFKHDE 360
           KWG +++     + + N N   D    N ++    +L +   A   F  LR ++      
Sbjct: 319 KWGRVSDARKLLDVMVNKNLMPDLVSYNTLIYGYTRLGNIGEAFLLFAELRYRS-LAPSV 377

Query: 361 HTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQ 420
            TY T++  L R        +L D+M++ G  P+V T+   +  + +   L  A ++F +
Sbjct: 378 VTYNTLIDGLCRLGDLDVAMRLKDEMIKHGPDPDVFTFTTFVRGFCKMGNLPMAKELFDE 437

Query: 421 MQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGH 480
           M   G +PDR  Y T I    K G    A  M ++M A G  PD  TY+V I+ L K G+
Sbjct: 438 MLNRGLQPDRFAYITRIVGELKLGDPSKAFGMQEEMLARGFPPDLITYNVFIDGLHKLGN 497

Query: 481 LQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSI 540
           L+ A +L  +M+  G +P+ VTY  +I     A + + A  L+ +M + G  P  VTY++
Sbjct: 498 LKEASELVKKMLYNGLVPDHVTYTSIIHAHLMAGHLRKARALFLEMLSKGIFPSVVTYTV 557

Query: 541 VMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAG 600
           ++      G L  A   F EM  K   P+   Y  L++   K   + +A+ ++  M   G
Sbjct: 558 LIHSYAVRGRLKLAILHFFEMHEKGVHPNVITYNALINGLCKVRKMDQAYNFFAEMQAKG 617

Query: 601 LRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
           + PN  T   L++    +G   +A  L + ML+  ++P   T+  LL
Sbjct: 618 ISPNKYTYTILINENCNLGHWQEALRLYKDMLDREIQPDSCTHRSLL 664



 Score =  125 bits (315), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 95/326 (29%), Positives = 157/326 (48%), Gaps = 5/326 (1%)

Query: 326 DAYQANQVLKQLQDHT----VALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINK 381
           D    N+VL+ L+D      VA   +N +  + G      TY TM+    +        +
Sbjct: 165 DVKNCNRVLRLLRDRDNNIDVAREVYNVMV-ECGICPTVVTYNTMLDSFCKKGMVQEALQ 223

Query: 382 LLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHA 441
           LL QM   GC PN VTYN L++    +  + +A ++ + M  +G E    TY  LI  + 
Sbjct: 224 LLFQMQAMGCSPNDVTYNVLVNGLSHSGEMEQAKELIQDMLRLGLEVSVYTYDPLIRGYC 283

Query: 442 KAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLV 501
           + G ++ A  + ++M + G  P   TY+ I+  L K G +  A +L   MVN+  +P+LV
Sbjct: 284 EKGQIEEASRLGEEMLSRGAVPTVVTYNTIMYGLCKWGRVSDARKLLDVMVNKNLMPDLV 343

Query: 502 TYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEM 561
           +YN +I    +  N   A  L+ +++     P  VTY+ +++ L   G LD A  +  EM
Sbjct: 344 SYNTLIYGYTRLGNIGEAFLLFAELRYRSLAPSVVTYNTLIDGLCRLGDLDVAMRLKDEM 403

Query: 562 RRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQL 621
            +    PD   +   V  + K GN+  A E ++ ML  GL+P+     + +   L++G  
Sbjct: 404 IKHGPDPDVFTFTTFVRGFCKMGNLPMAKELFDEMLNRGLQPDRFAYITRIVGELKLGDP 463

Query: 622 SDAYHLLQGMLNLGLKPSLQTYTLLL 647
           S A+ + + ML  G  P L TY + +
Sbjct: 464 SKAFGMQEEMLARGFPPDLITYNVFI 489



 Score =  123 bits (309), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 83/269 (30%), Positives = 134/269 (49%)

Query: 359 DEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVF 418
           D  T+TT V    +        +L D+M+  G QP+   Y   I    +    ++A  + 
Sbjct: 411 DVFTFTTFVRGFCKMGNLPMAKELFDEMLNRGLQPDRFAYITRIVGELKLGDPSKAFGMQ 470

Query: 419 KQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKA 478
           ++M   G  PD +TY   ID   K G L  A ++ KKM   GL PD  TY+ II+    A
Sbjct: 471 EEMLARGFPPDLITYNVFIDGLHKLGNLKEASELVKKMLYNGLVPDHVTYTSIIHAHLMA 530

Query: 479 GHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTY 538
           GHL+ A  LF EM+++G  P++VTY ++I   A     + A+  + +M   G  P+ +TY
Sbjct: 531 GHLRKARALFLEMLSKGIFPSVVTYTVLIHSYAVRGRLKLAILHFFEMHEKGVHPNVITY 590

Query: 539 SIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQ 598
           + ++  L     +D+A   FAEM+ K   P++  Y +L++     G+ ++A   Y+ ML 
Sbjct: 591 NALINGLCKVRKMDQAYNFFAEMQAKGISPNKYTYTILINENCNLGHWQEALRLYKDMLD 650

Query: 599 AGLRPNVPTCNSLLSAFLRVGQLSDAYHL 627
             ++P+  T  SLL    +  +L    HL
Sbjct: 651 REIQPDSCTHRSLLKHLNKDYKLHVVRHL 679


>gi|255660822|gb|ACU25580.1| pentatricopeptide repeat-containing protein [Mulguraea scoparia]
          Length = 418

 Score =  149 bits (376), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 88/299 (29%), Positives = 160/299 (53%)

Query: 350 LRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRAN 409
           L ++  F+    T   ++  L + + F  +    ++ +  G   ++  +N L+H++ +  
Sbjct: 91  LTKEHKFRVPFDTCRKVIEHLMKLKYFKLVWGFYEESLECGYPASLYFFNILMHNFCKGG 150

Query: 410 YLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYS 469
            +  A  VF  +   G  P  V++ TL++ + K G LD    +   MQA+G+ PD +TYS
Sbjct: 151 EIXLAQSVFDSITKWGLRPSVVSFNTLMNGYIKIGDLDEGFRLKSVMQASGVQPDVYTYS 210

Query: 470 VIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNA 529
           V+IN L K   +  A+ LF EM++ G +PN VT+  +I    K      A+++YR M + 
Sbjct: 211 VLINGLCKESKMDDANALFDEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYRQMLSQ 270

Query: 530 GFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKA 589
              PD +TY+ ++  L   G L +A+ +  EM  K   PD+  Y  L+D   K G++  A
Sbjct: 271 SLLPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGNCKEGDLETA 330

Query: 590 WEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
           +E+ + M++  +R +     +L+S   + G+  DA  +L+ ML++GLKP + TYT++++
Sbjct: 331 FEYRKRMIKENIRLDDVAYTALISXLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIIN 389



 Score =  123 bits (308), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 79/316 (25%), Positives = 155/316 (49%), Gaps = 10/316 (3%)

Query: 335 KQLQDHTVALGFFNWL------RRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVR 388
           +++ +H + L +F  +        + G+    + +  ++    +  +      + D + +
Sbjct: 105 RKVIEHLMKLKYFKLVWGFYEESLECGYPASLYFFNILMHNFCKGGEIXLAQSVFDSITK 164

Query: 389 DGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDV 448
            G +P+VV++N L++ Y +   L+E   +   MQ  G +PD  TY  LI+   K   +D 
Sbjct: 165 WGLRPSVVSFNTLMNGYIKIGDLDEGFRLKSVMQASGVQPDVYTYSVLINGLCKESKMDD 224

Query: 449 AMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIA 508
           A  ++ +M   GL P+  T++ +I+   K G +  A +++ +M++Q  +P+L+TYN +I 
Sbjct: 225 ANALFDEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYRQMLSQSLLPDLITYNTLIY 284

Query: 509 LQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHC--GYLDEAEAVFAEMRRKNW 566
              K  + + A  L  +M   G +PDK+TY+ +++  G+C  G L+ A      M ++N 
Sbjct: 285 GLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLID--GNCKEGDLETAFEYRKRMIKENI 342

Query: 567 VPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYH 626
             D+  Y  L+    + G    A +    ML  GL+P + T   +++ F + G +     
Sbjct: 343 RLDDVAYTALISXLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSK 402

Query: 627 LLQGMLNLGLKPSLQT 642
           LL+ M   G  P++ T
Sbjct: 403 LLKEMQRDGYLPNVVT 418


>gi|449443698|ref|XP_004139614.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
           mitochondrial-like [Cucumis sativus]
          Length = 732

 Score =  149 bits (376), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 87/284 (30%), Positives = 145/284 (51%), Gaps = 5/284 (1%)

Query: 365 TMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVV 424
            M G L  A+ F     L + M+  G QP++ TYN L+H   +   L+ A D+  +M   
Sbjct: 365 VMSGQLKEAQSF-----LNETMINFGFQPDIFTYNILMHGLCKEGSLSFARDLVNEMSRR 419

Query: 425 GCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAA 484
           GCEP+ +TY  L++   KAG L+ A  +  +M A GL+ ++  Y+ +I  L +   +  A
Sbjct: 420 GCEPNVITYAILVNGLCKAGLLEEAGLVLHEMSARGLTINSVIYNCLICALCRKEKVHVA 479

Query: 485 HQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEV 544
             L  EM  +GC P+L TYN +I    K      A +L+ +M   G   + VTY+ ++  
Sbjct: 480 LNLLSEMCTKGCKPDLFTYNSLIYGLCKVDRIDEAFRLFHNMLLDGAVANNVTYNTLIHA 539

Query: 545 LGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPN 604
           L   G   +A  +  +M  +    D+  Y  L+  + K GN+ K  E YE M+  GL  +
Sbjct: 540 LLRRGAFQKALTLVNDMLFRGCTLDKITYNGLIKAFCKVGNIEKGLELYEQMIMDGLGAD 599

Query: 605 VPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
             +CN +++   +VG++ +A+  L+  +N G  P + TY  +L+
Sbjct: 600 TISCNIMINGLCKVGKVDNAFEFLRDAINRGFVPDIVTYNSVLN 643



 Score =  140 bits (352), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 95/337 (28%), Positives = 160/337 (47%), Gaps = 8/337 (2%)

Query: 312 PLAEEALGNTNYSMDAYQANQVLKQLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILG 371
           P    A+ NT   ++ Y  +  LK+ Q       F N      GF+ D  TY  ++  L 
Sbjct: 350 PCPNNAILNT--LINGYVMSGQLKEAQS------FLNETMINFGFQPDIFTYNILMHGLC 401

Query: 372 RARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRV 431
           +         L+++M R GC+PNV+TY  L++   +A  L EA  V  +M   G   + V
Sbjct: 402 KEGSLSFARDLVNEMSRRGCEPNVITYAILVNGLCKAGLLEEAGLVLHEMSARGLTINSV 461

Query: 432 TYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEM 491
            Y  LI    +   + VA+++  +M   G  PD FTY+ +I  L K   +  A +LF  M
Sbjct: 462 IYNCLICALCRKEKVHVALNLLSEMCTKGCKPDLFTYNSLIYGLCKVDRIDEAFRLFHNM 521

Query: 492 VNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYL 551
           +  G + N VTYN +I    +   +Q AL L  DM   G   DK+TY+ +++     G +
Sbjct: 522 LLDGAVANNVTYNTLIHALLRRGAFQKALTLVNDMLFRGCTLDKITYNGLIKAFCKVGNI 581

Query: 552 DEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSL 611
           ++   ++ +M       D     ++++   K G V  A+E+    +  G  P++ T NS+
Sbjct: 582 EKGLELYEQMIMDGLGADTISCNIMINGLCKVGKVDNAFEFLRDAINRGFVPDIVTYNSV 641

Query: 612 LSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
           L+   +VG++ +A +L   +   G++P   TY   +S
Sbjct: 642 LNGLCKVGRIKEALNLFDRLQVEGVRPDAFTYNTFIS 678



 Score =  124 bits (312), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 90/357 (25%), Positives = 160/357 (44%), Gaps = 7/357 (1%)

Query: 312 PLAEEALGNTNYSMDAYQANQVLKQLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILG 371
           P     L  ++  +   Q  ++L+   D    L  F  +  Q G+ H    Y   +  LG
Sbjct: 64  PFDLTKLRKSHILITPVQLCKLLELPLDVPTLLEIFERVGGQKGYCHTFDVYYVFINKLG 123

Query: 372 RARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVG-CEPDR 430
              +F  I+KLL QM  +G       +  ++  YG+A    +A+ +   M+ V  CEP  
Sbjct: 124 AIGKFKLIDKLLMQMKEEGIVFRESIFMIIMKHYGKAGQPGQAIRLLLDMRAVYLCEPTF 183

Query: 431 VTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCE 490
            +Y  +++I        VA +++  M + G+SP  FT+ +++  L     + +A  L  +
Sbjct: 184 KSYDLVLEILVTGNCPQVATNVFYDMLSKGVSPTVFTFGIVMKALCMFNEVDSACSLLRD 243

Query: 491 MVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGY 550
           M   GC+PN + Y  +I   ++      ALKL  +M   G  PD  T++ V+  L     
Sbjct: 244 MTKHGCVPNSIVYQTLIHALSQKNQVSEALKLLEEMFVMGCMPDVQTFNDVIHGLCKVNK 303

Query: 551 LDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNS 610
           + +A  +   M  + + PD   YG L+    + G + +A      +L     PN    N+
Sbjct: 304 IHDATKLVDRMLLRGFYPDNMTYGFLLHGLCRIGKLNEA----RKILIKIPCPNNAILNT 359

Query: 611 LLSAFLRVGQLSDAYHLL-QGMLNLGLKPSLQTYTLLL-SCCTEARSPYDMGFCHEL 665
           L++ ++  GQL +A   L + M+N G +P + TY +L+   C E    +     +E+
Sbjct: 360 LINGYVMSGQLKEAQSFLNETMINFGFQPDIFTYNILMHGLCKEGSLSFARDLVNEM 416



 Score =  118 bits (296), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 75/274 (27%), Positives = 127/274 (46%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           G   +   Y  ++  L R  +      LL +M   GC+P++ TYN LI+   + + ++EA
Sbjct: 455 GLTINSVIYNCLICALCRKEKVHVALNLLSEMCTKGCKPDLFTYNSLIYGLCKVDRIDEA 514

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
             +F  M + G   + VTY TLI    + G    A+ +   M   G + D  TY+ +I  
Sbjct: 515 FRLFHNMLLDGAVANNVTYNTLIHALLRRGAFQKALTLVNDMLFRGCTLDKITYNGLIKA 574

Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPD 534
             K G+++   +L+ +M+  G   + ++ NIMI    K     +A +  RD  N GF PD
Sbjct: 575 FCKVGNIEKGLELYEQMIMDGLGADTISCNIMINGLCKVGKVDNAFEFLRDAINRGFVPD 634

Query: 535 KVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYE 594
            VTY+ V+  L   G + EA  +F  ++ +   PD   Y   +    K G V  A  ++ 
Sbjct: 635 IVTYNSVLNGLCKVGRIKEALNLFDRLQVEGVRPDAFTYNTFISWQCKEGMVNDACLFFY 694

Query: 595 AMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLL 628
             ++ G  P+  T N L+   L+     + + +L
Sbjct: 695 RGIENGFVPSNLTWNVLVYTLLKQSNQENNFFVL 728


>gi|357120470|ref|XP_003561950.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Brachypodium distachyon]
          Length = 925

 Score =  149 bits (376), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 107/382 (28%), Positives = 185/382 (48%), Gaps = 26/382 (6%)

Query: 382 LLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHA 441
           +L  M++    P +VTYN +I  Y  +   + A+ V + M+  GC+PD  +Y  LI    
Sbjct: 457 MLTNMLKGRPTPTLVTYNIIIKGYCDSGDTDVAIRVLELMKANGCQPDEWSYTELISGFC 516

Query: 442 KAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLV 501
           K   +++A  M+ +M   GL P+  TY+ +I+   K   L  A ++   M   GC PN+ 
Sbjct: 517 KISKMELASGMFNEMMDRGLCPNEVTYTALISGYCKDEKLDCAARMLERMKRSGCRPNVQ 576

Query: 502 TYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEM 561
           TYN++I    K  N+  A +L + M      PD VTYS V+  L + G +  A  +F +M
Sbjct: 577 TYNVLIHGLTKQNNFSGAEELCKVMLEEKISPDVVTYSTVINGLCNNGAIPLALEMFNKM 636

Query: 562 RRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQL 621
            +   +P+   Y  L+   G+ G V +A E +  + + GL P+  T   ++   +  G++
Sbjct: 637 VKHGCLPNLHTYSSLIQALGQEGRVEEAEEMFSELKKQGLIPDEVTYVKMIEVCVMSGKV 696

Query: 622 SDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGFCHELMAVSGHPAHMFLLSMP 681
             A+  L  M+N G +P+LQTY +L+            G  +E++       +  L+++P
Sbjct: 697 DRAFDFLGEMINAGCQPTLQTYDVLIK-----------GLQNEMV-------YHKLVALP 738

Query: 682 SPGP----DGQNVRDHVGSFLEMMHSE-DRESKRGLVDAVVDFLHKSGLKEEAGSVWEVA 736
           +       D Q +   V S L    +E D E  R L DA++  L +SG   EA +++   
Sbjct: 739 NAASTSTFDDQIINKDVISVLSSKLAELDFELSRQLYDALLSRLSRSGRWFEANNLYRSM 798

Query: 737 AQKNVYPDAVKEKGMSYWLINL 758
             ++  P+   +    ++LI+L
Sbjct: 799 VSQSQCPN---QDTYKHFLISL 817



 Score =  134 bits (336), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 112/444 (25%), Positives = 188/444 (42%), Gaps = 41/444 (9%)

Query: 339 DHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTY 398
           + T AL + +    Q G K    TYTT++  L +      +     Q++R+G QPN++ Y
Sbjct: 173 EMTQALNYLDMFS-QRGPKMGLFTYTTLLIQLNKLNMTSTVMDRYHQILREGLQPNLLIY 231

Query: 399 NRLIHS-----------------------------------YGRANYLNEALDVFKQMQV 423
           N +I++                                   Y R   L+ A ++F +M  
Sbjct: 232 NSVINALCKDGNVRDAESIINKVFKSGMKPDTFTYTSMILGYCRNRDLDSAFEIFNRMDE 291

Query: 424 VGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQA 483
            GCEP+  TY TLI+    +G ++ A+D   +M   G+ P   T++  I  L   G ++ 
Sbjct: 292 EGCEPNAATYSTLINGLCNSGRVNEALDFISEMTRHGVLPTVHTFTAPIVALCDMGRIED 351

Query: 484 AHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVME 543
           A ++F +M  +GC PN+ TY  +I+ Q  +R    A+ L+  M   G  P+ VTY+ +M 
Sbjct: 352 AWKIFIDMKKKGCKPNVYTYTSLISGQRVSR---MAIGLFHRMSRDGVVPNTVTYNALMN 408

Query: 544 VLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRP 603
           VL     +D A  VF  M +   +P+   Y  L+  +   G+  KA      ML+    P
Sbjct: 409 VLMENMEIDSALIVFNMMGKHGCLPNTSSYNELIRGYCTIGDTEKAMSMLTNMLKGRPTP 468

Query: 604 NVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS-CCTEARSPYDMGFC 662
            + T N ++  +   G    A  +L+ M   G +P   +YT L+S  C  ++     G  
Sbjct: 469 TLVTYNIIIKGYCDSGDTDVAIRVLELMKANGCQPDEWSYTELISGFCKISKMELASGMF 528

Query: 663 HELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRESKRGLVDAVVDFLHK 722
           +E+M     P  +   ++ S G       D     LE M            + ++  L K
Sbjct: 529 NEMMDRGLCPNEVTYTALIS-GYCKDEKLDCAARMLERMKRSGCRPNVQTYNVLIHGLTK 587

Query: 723 SGLKEEAGSVWEVAAQKNVYPDAV 746
                 A  + +V  ++ + PD V
Sbjct: 588 QNNFSGAEELCKVMLEEKISPDVV 611



 Score =  102 bits (254), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 82/312 (26%), Positives = 134/312 (42%), Gaps = 21/312 (6%)

Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNR-- 400
           AL F  +L R+   K+   T+  +   L  +R                 +P  V   R  
Sbjct: 120 ALEFLLFLSREHSHKYGPDTFAKVAMRLLESRD----------------RPAAVGRARIH 163

Query: 401 LIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAG 460
           +I S      + +AL+        G +    TY TL+    K       MD Y ++   G
Sbjct: 164 MIKSCSNKAEMTQALNYLDMFSQRGPKMGLFTYTTLLIQLNKLNMTSTVMDRYHQILREG 223

Query: 461 LSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSAL 520
           L P+   Y+ +IN L K G+++ A  +  ++   G  P+  TY  MI    + R+  SA 
Sbjct: 224 LQPNLLIYNSVINALCKDGNVRDAESIINKVFKSGMKPDTFTYTSMILGYCRNRDLDSAF 283

Query: 521 KLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLW 580
           +++  M   G EP+  TYS ++  L + G ++EA    +EM R   +P    +   +   
Sbjct: 284 EIFNRMDEEGCEPNAATYSTLINGLCNSGRVNEALDFISEMTRHGVLPTVHTFTAPIVAL 343

Query: 581 GKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSL 640
              G +  AW+ +  M + G +PNV T  SL+S   RV ++  A  L   M   G+ P+ 
Sbjct: 344 CDMGRIEDAWKIFIDMKKKGCKPNVYTYTSLISG-QRVSRM--AIGLFHRMSRDGVVPNT 400

Query: 641 QTYTLLLSCCTE 652
            TY  L++   E
Sbjct: 401 VTYNALMNVLME 412



 Score = 69.7 bits (169), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 66/295 (22%), Positives = 116/295 (39%), Gaps = 57/295 (19%)

Query: 359 DEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVF 418
           D  TY+T++  L          ++ ++MV+ GC PN+ TY+ LI + G+   + EA ++F
Sbjct: 609 DVVTYSTVINGLCNNGAIPLALEMFNKMVKHGCLPNLHTYSSLIQALGQEGRVEEAEEMF 668

Query: 419 KQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMD--------------------------- 451
            +++  G  PD VTY  +I++   +G +D A D                           
Sbjct: 669 SELKKQGLIPDEVTYVKMIEVCVMSGKVDRAFDFLGEMINAGCQPTLQTYDVLIKGLQNE 728

Query: 452 -MYKKMQAAGLSPDTFT-----------------------------YSVIINCLGKAGHL 481
            +Y K+ A   +  T T                             Y  +++ L ++G  
Sbjct: 729 MVYHKLVALPNAASTSTFDDQIINKDVISVLSSKLAELDFELSRQLYDALLSRLSRSGRW 788

Query: 482 QAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIV 541
             A+ L+  MV+Q   PN  TY   +    +A     A+ +++ M +   E     Y  +
Sbjct: 789 FEANNLYRSMVSQSQCPNQDTYKHFLISLLRALKVDLAMDVFKHMSDQRCELHLTGYKEL 848

Query: 542 MEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAM 596
           +  L       EA  VF +M  +    DE V+ +L++    AG      E+   M
Sbjct: 849 ICTLCQLHRRKEARFVFEKMLSRALNADEIVWTILINGLLGAGYKDLCMEFLHIM 903



 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 54/229 (23%), Positives = 94/229 (41%), Gaps = 23/229 (10%)

Query: 346 FFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHS- 404
            F+ L++Q G   DE TY  M+ +   + +       L +M+  GCQP + TY+ LI   
Sbjct: 667 MFSELKKQ-GLIPDEVTYVKMIEVCVMSGKVDRAFDFLGEMINAGCQPTLQTYDVLIKGL 725

Query: 405 -----YGRANYLNEAL------------DVFKQMQVVGCEPD----RVTYCTLIDIHAKA 443
                Y +   L  A             DV   +     E D    R  Y  L+   +++
Sbjct: 726 QNEMVYHKLVALPNAASTSTFDDQIINKDVISVLSSKLAELDFELSRQLYDALLSRLSRS 785

Query: 444 GFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTY 503
           G    A ++Y+ M +    P+  TY   +  L +A  +  A  +F  M +Q C  +L  Y
Sbjct: 786 GRWFEANNLYRSMVSQSQCPNQDTYKHFLISLLRALKVDLAMDVFKHMSDQRCELHLTGY 845

Query: 504 NIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLD 552
             +I    +    + A  ++  M +     D++ ++I++  L   GY D
Sbjct: 846 KELICTLCQLHRRKEARFVFEKMLSRALNADEIVWTILINGLLGAGYKD 894


>gi|297793693|ref|XP_002864731.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297310566|gb|EFH40990.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 732

 Score =  149 bits (376), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 92/293 (31%), Positives = 141/293 (48%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           G   D H Y+ +     +        KLLD+M   G +PNV  Y   I    R N + EA
Sbjct: 228 GLVPDVHIYSVLFQCCFKQGFPSKKEKLLDEMTSLGVKPNVYIYTIYIRDLCRENKMEEA 287

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
             +F+ M++ G  P+  TY  +ID + K G L  A  +YK++  A L P+   +  +++ 
Sbjct: 288 EKMFELMKIHGVVPNLYTYSAMIDGYCKTGNLRQAYGLYKEILVAELLPNVVVFGTLVDG 347

Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPD 534
             KA  L AA  LF  MV  G  PNL  YN +I  Q K+ N   A+ L  +M++    PD
Sbjct: 348 FCKARELVAARSLFVHMVKFGVDPNLYVYNCLIHGQCKSGNMLEAMGLLSEMESLNLSPD 407

Query: 535 KVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYE 594
             TY+I++  L     L EA  +F  M+ +   P    Y  L+  + K  N+ KA +   
Sbjct: 408 VFTYTILINGLCTEERLAEANRLFQRMKNERIFPSSVTYNSLIHGFCKEYNIEKALDLCS 467

Query: 595 AMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
            M  +G+ PN+ T ++L+  + +V  +  A  L   M   G+ P + TYT L+
Sbjct: 468 EMTSSGVEPNIITFSTLIDGYCKVRNIKAAMGLYFEMTIKGIVPDVVTYTTLI 520


>gi|357477483|ref|XP_003609027.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355510082|gb|AES91224.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 583

 Score =  149 bits (376), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 90/312 (28%), Positives = 159/312 (50%), Gaps = 1/312 (0%)

Query: 359 DEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVF 418
           +E T+ T++    +     A  K  ++M + G +PN+VTYN LI+       L EA+D++
Sbjct: 272 NEVTFNTLIDGFCKDENVAAAKKAFEEMQKQGLKPNIVTYNSLINGLCNNGKLEEAIDLW 331

Query: 419 KQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKA 478
            +M  +G +P+ VTY  LI+   K   +  A  ++  +    L P+  T++ +I+   K 
Sbjct: 332 DKMVGLGLKPNIVTYNALINGFCKKKMMKEATKVFDDVSKQELVPNVITFNTMIDAYCKE 391

Query: 479 GHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTY 538
           G ++    L   M+++G +PN+ TYN +IA   + ++ Q+A +L  +M+N G + D VTY
Sbjct: 392 GMMEEGFSLCSSMLDEGILPNVSTYNCLIAGLCRKQDLQAAKELLNEMENKGLKGDVVTY 451

Query: 539 SIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQ 598
           +I+++ L        AE +  EM      P+   Y  L+D +   G ++ A      M +
Sbjct: 452 NILIDGLCKNDKSRNAEKLLNEMFNLGLKPNHVTYNTLMDGYCMEGKLKAALNVRTRMEK 511

Query: 599 AGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLL-LSCCTEARSPY 657
              +PNV T N L+  + ++ +L  A  LL  ML  GL P+  TY ++ L    +  SP 
Sbjct: 512 ERKQPNVVTYNVLIKGYCKINKLEAANGLLNEMLEKGLNPNRTTYDIVRLEMLEKGFSPD 571

Query: 658 DMGFCHELMAVS 669
             G  + + ++S
Sbjct: 572 IEGHLYNISSMS 583



 Score =  147 bits (371), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 94/328 (28%), Positives = 160/328 (48%), Gaps = 4/328 (1%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           +  GFK    +   ++  L +  + G +  +  +M++     N+ T+N  I+   RA  L
Sbjct: 157 KDYGFKLSLTSCNPLLSALVKENKIGDVEYVYKEMIKRRIHTNLNTFNIFINGLCRAGKL 216

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAK---AGFLDVAMDMYKKMQAAGLSPDTFTY 468
           N+A D  + M+  G  P+ VTY TL+D + K   AG +  A    K+M A  + P+  T+
Sbjct: 217 NKAEDAIEDMKAWGISPNVVTYNTLVDGYCKRGSAGKMYKAEAFMKEMLANKICPNEVTF 276

Query: 469 SVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQN 528
           + +I+   K  ++ AA + F EM  QG  PN+VTYN +I         + A+ L+  M  
Sbjct: 277 NTLIDGFCKDENVAAAKKAFEEMQKQGLKPNIVTYNSLINGLCNNGKLEEAIDLWDKMVG 336

Query: 529 AGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRK 588
            G +P+ VTY+ ++        + EA  VF ++ ++  VP+   +  ++D + K G + +
Sbjct: 337 LGLKPNIVTYNALINGFCKKKMMKEATKVFDDVSKQELVPNVITFNTMIDAYCKEGMMEE 396

Query: 589 AWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
            +    +ML  G+ PNV T N L++   R   L  A  LL  M N GLK  + TY +L+ 
Sbjct: 397 GFSLCSSMLDEGILPNVSTYNCLIAGLCRKQDLQAAKELLNEMENKGLKGDVVTYNILID 456

Query: 649 -CCTEARSPYDMGFCHELMAVSGHPAHM 675
             C   +S       +E+  +   P H+
Sbjct: 457 GLCKNDKSRNAEKLLNEMFNLGLKPNHV 484



 Score =  132 bits (331), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 86/264 (32%), Positives = 139/264 (52%), Gaps = 7/264 (2%)

Query: 347 FNWLRRQAGFKHDEHTYTTMV-GILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSY 405
           F  +++Q G K +  TY +++ G+    +   AI+ L D+MV  G +PN+VTYN LI+ +
Sbjct: 296 FEEMQKQ-GLKPNIVTYNSLINGLCNNGKLEEAID-LWDKMVGLGLKPNIVTYNALINGF 353

Query: 406 GRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDT 465
            +   + EA  VF  +      P+ +T+ T+ID + K G ++    +   M   G+ P+ 
Sbjct: 354 CKKKMMKEATKVFDDVSKQELVPNVITFNTMIDAYCKEGMMEEGFSLCSSMLDEGILPNV 413

Query: 466 FTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRD 525
            TY+ +I  L +   LQAA +L  EM N+G   ++VTYNI+I    K    ++A KL  +
Sbjct: 414 STYNCLIAGLCRKQDLQAAKELLNEMENKGLKGDVVTYNILIDGLCKNDKSRNAEKLLNE 473

Query: 526 MQNAGFEPDKVTYSIVMEVLGHC--GYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKA 583
           M N G +P+ VTY+ +M+  G+C  G L  A  V   M ++   P+   Y +L+  + K 
Sbjct: 474 MFNLGLKPNHVTYNTLMD--GYCMEGKLKAALNVRTRMEKERKQPNVVTYNVLIKGYCKI 531

Query: 584 GNVRKAWEWYEAMLQAGLRPNVPT 607
             +  A      ML+ GL PN  T
Sbjct: 532 NKLEAANGLLNEMLEKGLNPNRTT 555



 Score =  128 bits (322), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 84/289 (29%), Positives = 141/289 (48%), Gaps = 3/289 (1%)

Query: 362 TYTTMVGILGRARQFGAINK---LLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVF 418
           TY T+V    +    G + K    + +M+ +   PN VT+N LI  + +   +  A   F
Sbjct: 237 TYNTLVDGYCKRGSAGKMYKAEAFMKEMLANKICPNEVTFNTLIDGFCKDENVAAAKKAF 296

Query: 419 KQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKA 478
           ++MQ  G +P+ VTY +LI+     G L+ A+D++ KM   GL P+  TY+ +IN   K 
Sbjct: 297 EEMQKQGLKPNIVTYNSLINGLCNNGKLEEAIDLWDKMVGLGLKPNIVTYNALINGFCKK 356

Query: 479 GHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTY 538
             ++ A ++F ++  Q  +PN++T+N MI    K    +    L   M + G  P+  TY
Sbjct: 357 KMMKEATKVFDDVSKQELVPNVITFNTMIDAYCKEGMMEEGFSLCSSMLDEGILPNVSTY 416

Query: 539 SIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQ 598
           + ++  L     L  A+ +  EM  K    D   Y +L+D   K    R A +    M  
Sbjct: 417 NCLIAGLCRKQDLQAAKELLNEMENKGLKGDVVTYNILIDGLCKNDKSRNAEKLLNEMFN 476

Query: 599 AGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
            GL+PN  T N+L+  +   G+L  A ++   M     +P++ TY +L+
Sbjct: 477 LGLKPNHVTYNTLMDGYCMEGKLKAALNVRTRMEKERKQPNVVTYNVLI 525



 Score =  102 bits (253), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 89/386 (23%), Positives = 159/386 (41%), Gaps = 64/386 (16%)

Query: 298 VESVSRILRQWKWGPLAEEALGNTNYSMDAYQANQVLKQLQDHTVALGFFNWLRRQAGFK 357
           + ++S +L +  W  L      +   +  A   +Q+L    D  + L FF W +++    
Sbjct: 20  IPTISELLSKQHWSELKP----HLRVTKPATFLDQLLNAGVDSELVLRFFKWSQKEYRLS 75

Query: 358 HDEHTYTTMVGILGRARQFGAINKLLDQMVR---------------DGCQP--NVVTYNR 400
           +     + ++  L  ++++  +   LD  V+               DG +P    +  + 
Sbjct: 76  YGLEPTSKVLHFLANSKRYSKVRSFLDSFVKNEKHTVSSVFHSLLLDGGRPGATALIIDM 135

Query: 401 LIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAG 460
           L+ +Y +   L+ A + F + +  G +    +   L+    K   +     +YK+M    
Sbjct: 136 LVLAYVKNLELHCAYEAFTRAKDYGFKLSLTSCNPLLSALVKENKIGDVEYVYKEMIKRR 195

Query: 461 LSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSAL 520
           +  +  T+++ IN L +AG L  A     +M   G  PN+VTYN ++    K        
Sbjct: 196 IHTNLNTFNIFINGLCRAGKLNKAEDAIEDMKAWGISPNVVTYNTLVDGYCKR------- 248

Query: 521 KLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLW 580
                                    G  G + +AEA   EM      P+E  +  L+D +
Sbjct: 249 -------------------------GSAGKMYKAEAFMKEMLANKICPNEVTFNTLIDGF 283

Query: 581 GKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSL 640
            K  NV  A + +E M + GL+PN+ T NSL++     G+L +A  L   M+ LGLKP++
Sbjct: 284 CKDENVAAAKKAFEEMQKQGLKPNIVTYNSLINGLCNNGKLEEAIDLWDKMVGLGLKPNI 343

Query: 641 QTYTLLLSCCTEARSPYDMGFCHELM 666
            TY  L++           GFC + M
Sbjct: 344 VTYNALIN-----------GFCKKKM 358


>gi|242079087|ref|XP_002444312.1| hypothetical protein SORBIDRAFT_07g020010 [Sorghum bicolor]
 gi|241940662|gb|EES13807.1| hypothetical protein SORBIDRAFT_07g020010 [Sorghum bicolor]
          Length = 695

 Score =  149 bits (376), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 96/354 (27%), Positives = 168/354 (47%), Gaps = 4/354 (1%)

Query: 326 DAYQANQVLKQL---QDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKL 382
           DA+  N V+  L      + AL  F+ +  + G   ++ TY TM+    +     A  +L
Sbjct: 194 DAFSYNVVIAGLWRSGKGSDALKVFDEMVDR-GVAPNQITYNTMIDGHVKGGDLEAGFRL 252

Query: 383 LDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAK 442
            DQM++DG +PNVVTYN L+    RA  ++E   +  +M      PD  TY  L D   +
Sbjct: 253 RDQMLQDGRKPNVVTYNVLLSGLCRAGRMDETRALMDEMTSYSMLPDGFTYSILFDGLTR 312

Query: 443 AGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVT 502
            G     + ++ +    G+    +T S+++N L K G +  A Q+   +V+ G +P    
Sbjct: 313 TGDSRTMLSLFGESLKKGVIIGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTAI 372

Query: 503 YNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMR 562
           YN +I    + R+ Q A  ++  M++    PD +TY+ ++  L     + EAE +  EM 
Sbjct: 373 YNTLINGYCQVRDLQGAFSIFEQMKSRHIRPDHITYNALINGLCKMEMITEAEDLVMEME 432

Query: 563 RKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLS 622
           +    P    +  L+D +G+AG + K +     M   G++ NV +  S++ AF + G++ 
Sbjct: 433 KSGVDPSVETFNTLIDAYGRAGQLEKCFTVLSDMQDKGIKSNVISFGSVVKAFCKNGKIP 492

Query: 623 DAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGFCHELMAVSGHPAHMF 676
           +A  +L  M++  + P+ Q Y  ++    E+          E M  SG  A +F
Sbjct: 493 EAVAILDDMIHKDVVPNAQVYNSIIDAYIESGGTEQAFLLVEKMKSSGVSASIF 546



 Score =  123 bits (309), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 84/349 (24%), Positives = 161/349 (46%), Gaps = 9/349 (2%)

Query: 359 DEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVF 418
           D  TY+ +   L R      +  L  + ++ G      T + L++   +   + +A  V 
Sbjct: 299 DGFTYSILFDGLTRTGDSRTMLSLFGESLKKGVIIGAYTCSILLNGLCKDGKVAKAEQVL 358

Query: 419 KQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKA 478
           + +   G  P    Y TLI+ + +   L  A  ++++M++  + PD  TY+ +IN L K 
Sbjct: 359 EMLVHTGLVPTTAIYNTLINGYCQVRDLQGAFSIFEQMKSRHIRPDHITYNALINGLCKM 418

Query: 479 GHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTY 538
             +  A  L  EM   G  P++ T+N +I    +A   +    +  DMQ+ G + + +++
Sbjct: 419 EMITEAEDLVMEMEKSGVDPSVETFNTLIDAYGRAGQLEKCFTVLSDMQDKGIKSNVISF 478

Query: 539 SIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQ 598
             V++     G + EA A+  +M  K+ VP+  VY  ++D + ++G   +A+   E M  
Sbjct: 479 GSVVKAFCKNGKIPEAVAILDDMIHKDVVPNAQVYNSIIDAYIESGGTEQAFLLVEKMKS 538

Query: 599 AGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTY-TLLLSCCTEARSPY 657
           +G+  ++ T N LL    +  Q+ +A  L+  + N GL+P + +Y T++ +CC +  +  
Sbjct: 539 SGVSASIFTYNLLLKGLCKNSQIDEAEELIYNLTNQGLRPDVVSYNTIISACCNKGDTDR 598

Query: 658 DMGFCHELMAVSGHPA----HMFLLSMPSPGPDGQNVRDHVGSFLEMMH 702
            +    E+      P     H  L ++ S G     V D    +  M+H
Sbjct: 599 ALELLQEMHKYDIRPTLRTYHPLLSALGSAG----RVHDMECLYQHMVH 643



 Score =  121 bits (303), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 70/281 (24%), Positives = 134/281 (47%)

Query: 363 YTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQ 422
           Y T++    + R       + +QM     +P+ +TYN LI+   +   + EA D+  +M+
Sbjct: 373 YNTLINGYCQVRDLQGAFSIFEQMKSRHIRPDHITYNALINGLCKMEMITEAEDLVMEME 432

Query: 423 VVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQ 482
             G +P   T+ TLID + +AG L+    +   MQ  G+  +  ++  ++    K G + 
Sbjct: 433 KSGVDPSVETFNTLIDAYGRAGQLEKCFTVLSDMQDKGIKSNVISFGSVVKAFCKNGKIP 492

Query: 483 AAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVM 542
            A  +  +M+++  +PN   YN +I    ++   + A  L   M+++G      TY++++
Sbjct: 493 EAVAILDDMIHKDVVPNAQVYNSIIDAYIESGGTEQAFLLVEKMKSSGVSASIFTYNLLL 552

Query: 543 EVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLR 602
           + L     +DEAE +   +  +   PD   Y  ++      G+  +A E  + M +  +R
Sbjct: 553 KGLCKNSQIDEAEELIYNLTNQGLRPDVVSYNTIISACCNKGDTDRALELLQEMHKYDIR 612

Query: 603 PNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTY 643
           P + T + LLSA    G++ D   L Q M++  ++PS   Y
Sbjct: 613 PTLRTYHPLLSALGSAGRVHDMECLYQHMVHKNVEPSSSIY 653



 Score =  121 bits (303), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 73/264 (27%), Positives = 129/264 (48%), Gaps = 2/264 (0%)

Query: 393 PNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDM 452
           P++ + N L+ S        +    F  +   G  PD   +   +     AG LD A+ M
Sbjct: 121 PSLSSCNLLLESLLSVGRHADVRAAFGLLVAAGARPDTFAWNKAVQACVAAGDLDEALAM 180

Query: 453 YKKM--QAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQ 510
            ++M        PD F+Y+V+I  L ++G    A ++F EMV++G  PN +TYN MI   
Sbjct: 181 LRRMGRSEGAPPPDAFSYNVVIAGLWRSGKGSDALKVFDEMVDRGVAPNQITYNTMIDGH 240

Query: 511 AKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDE 570
            K  + ++  +L   M   G +P+ VTY++++  L   G +DE  A+  EM   + +PD 
Sbjct: 241 VKGGDLEAGFRLRDQMLQDGRKPNVVTYNVLLSGLCRAGRMDETRALMDEMTSYSMLPDG 300

Query: 571 PVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQG 630
             Y +L D   + G+ R     +   L+ G+     TC+ LL+   + G+++ A  +L+ 
Sbjct: 301 FTYSILFDGLTRTGDSRTMLSLFGESLKKGVIIGAYTCSILLNGLCKDGKVAKAEQVLEM 360

Query: 631 MLNLGLKPSLQTYTLLLSCCTEAR 654
           +++ GL P+   Y  L++   + R
Sbjct: 361 LVHTGLVPTTAIYNTLINGYCQVR 384



 Score =  118 bits (295), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 68/255 (26%), Positives = 131/255 (51%)

Query: 393 PNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDM 452
           P+  +YN +I    R+   ++AL VF +M   G  P+++TY T+ID H K G L+    +
Sbjct: 193 PDAFSYNVVIAGLWRSGKGSDALKVFDEMVDRGVAPNQITYNTMIDGHVKGGDLEAGFRL 252

Query: 453 YKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAK 512
             +M   G  P+  TY+V+++ L +AG +     L  EM +   +P+  TY+I+     +
Sbjct: 253 RDQMLQDGRKPNVVTYNVLLSGLCRAGRMDETRALMDEMTSYSMLPDGFTYSILFDGLTR 312

Query: 513 ARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPV 572
             + ++ L L+ +    G      T SI++  L   G + +AE V   +     VP   +
Sbjct: 313 TGDSRTMLSLFGESLKKGVIIGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTAI 372

Query: 573 YGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGML 632
           Y  L++ + +  +++ A+  +E M    +RP+  T N+L++   ++  +++A  L+  M 
Sbjct: 373 YNTLINGYCQVRDLQGAFSIFEQMKSRHIRPDHITYNALINGLCKMEMITEAEDLVMEME 432

Query: 633 NLGLKPSLQTYTLLL 647
             G+ PS++T+  L+
Sbjct: 433 KSGVDPSVETFNTLI 447



 Score =  108 bits (271), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 70/288 (24%), Positives = 127/288 (44%), Gaps = 36/288 (12%)

Query: 336 QLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNV 395
           Q++D   A   F  ++ +   + D  TY  ++  L +         L+ +M + G  P+V
Sbjct: 382 QVRDLQGAFSIFEQMKSRH-IRPDHITYNALINGLCKMEMITEAEDLVMEMEKSGVDPSV 440

Query: 396 VTYNRLIHSYGRANYLNEALDVFKQMQVVGCE---------------------------- 427
            T+N LI +YGRA  L +   V   MQ  G +                            
Sbjct: 441 ETFNTLIDAYGRAGQLEKCFTVLSDMQDKGIKSNVISFGSVVKAFCKNGKIPEAVAILDD 500

Query: 428 -------PDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGH 480
                  P+   Y ++ID + ++G  + A  + +KM+++G+S   FTY++++  L K   
Sbjct: 501 MIHKDVVPNAQVYNSIIDAYIESGGTEQAFLLVEKMKSSGVSASIFTYNLLLKGLCKNSQ 560

Query: 481 LQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSI 540
           +  A +L   + NQG  P++V+YN +I+      +   AL+L ++M      P   TY  
Sbjct: 561 IDEAEELIYNLTNQGLRPDVVSYNTIISACCNKGDTDRALELLQEMHKYDIRPTLRTYHP 620

Query: 541 VMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRK 588
           ++  LG  G + + E ++  M  KN  P   +YG   +   K  +++K
Sbjct: 621 LLSALGSAGRVHDMECLYQHMVHKNVEPSSSIYGTRCENESKVASLKK 668



 Score =  105 bits (263), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 92/376 (24%), Positives = 170/376 (45%), Gaps = 30/376 (7%)

Query: 386 MVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQM-QVVGCEP-DRVTYCTLIDIHAKA 443
           +V  G +P+   +N+ + +   A  L+EAL + ++M +  G  P D  +Y  +I    ++
Sbjct: 149 LVAAGARPDTFAWNKAVQACVAAGDLDEALAMLRRMGRSEGAPPPDAFSYNVVIAGLWRS 208

Query: 444 GFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTY 503
           G    A+ ++ +M   G++P+  TY+ +I+   K G L+A  +L  +M+  G  PN+VTY
Sbjct: 209 GKGSDALKVFDEMVDRGVAPNQITYNTMIDGHVKGGDLEAGFRLRDQMLQDGRKPNVVTY 268

Query: 504 NIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRR 563
           N++++   +A        L  +M +    PD  TYSI+ + L   G      ++F E  +
Sbjct: 269 NVLLSGLCRAGRMDETRALMDEMTSYSMLPDGFTYSILFDGLTRTGDSRTMLSLFGESLK 328

Query: 564 KNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSD 623
           K  +       +L++   K G V KA +  E ++  GL P     N+L++ + +V  L  
Sbjct: 329 KGVIIGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTAIYNTLINGYCQVRDLQG 388

Query: 624 AYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGFCHELMAVSGHPAHMFLLSMPSP 683
           A+ + + M +  ++P   TY  L++           G C   M      A   ++ M   
Sbjct: 389 AFSIFEQMKSRHIRPDHITYNALIN-----------GLCKMEMITE---AEDLVMEMEKS 434

Query: 684 GPDG-----QNVRDHVG-------SFLEMMHSEDRESKRGLVD--AVVDFLHKSGLKEEA 729
           G D        + D  G        F  +   +D+  K  ++   +VV    K+G   EA
Sbjct: 435 GVDPSVETFNTLIDAYGRAGQLEKCFTVLSDMQDKGIKSNVISFGSVVKAFCKNGKIPEA 494

Query: 730 GSVWEVAAQKNVYPDA 745
            ++ +    K+V P+A
Sbjct: 495 VAILDDMIHKDVVPNA 510



 Score = 60.1 bits (144), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 37/164 (22%), Positives = 76/164 (46%), Gaps = 4/164 (2%)

Query: 382 LLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHA 441
           L+++M   G   ++ TYN L+    + + ++EA ++   +   G  PD V+Y T+I    
Sbjct: 532 LVEKMKSSGVSASIFTYNLLLKGLCKNSQIDEAEELIYNLTNQGLRPDVVSYNTIISACC 591

Query: 442 KAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLV 501
             G  D A+++ ++M    + P   TY  +++ LG AG +     L+  MV++   P+  
Sbjct: 592 NKGDTDRALELLQEMHKYDIRPTLRTYHPLLSALGSAGRVHDMECLYQHMVHKNVEPSSS 651

Query: 502 TYNIMIALQAKARNYQSALK----LYRDMQNAGFEPDKVTYSIV 541
            Y      ++K  + +  +      + D +    E D++  S +
Sbjct: 652 IYGTRCENESKVASLKKEMSEKGIAFDDTERTNLELDRIIASPI 695


>gi|302771513|ref|XP_002969175.1| hypothetical protein SELMODRAFT_90172 [Selaginella moellendorffii]
 gi|300163680|gb|EFJ30291.1| hypothetical protein SELMODRAFT_90172 [Selaginella moellendorffii]
          Length = 399

 Score =  149 bits (376), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 99/300 (33%), Positives = 155/300 (51%), Gaps = 6/300 (2%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           +    K D  T+ T++  L +A +     ++LD+M R G   N+VTYN LI+    A   
Sbjct: 81  KDGACKPDVVTFNTLIAGLCKAGRLDEAQQVLDEMERSGFAANLVTYNTLINGLSSAGRS 140

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKM-QAAGLSPDTFTYSV 470
            EA+ V + M      PD  TY  +I    K+G +D A    ++M Q AG SPDTFTYS+
Sbjct: 141 GEAVLVMQGMTTT---PDTQTYNAIIHGFCKSGEIDRAYGFLEEMKQRAGCSPDTFTYSI 197

Query: 471 IINCLGKAGHLQAAHQLFCEMVN-QGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNA 529
           +IN L K+ +L+ A +L  EM+  + C  ++V +N ++    KA++   A +L   M   
Sbjct: 198 LINGLCKSSNLRKADELLQEMIGRKDCCASVVAFNTLVDGYCKAQDLDRARELLSSMLEH 257

Query: 530 GFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKA 589
           G  PD VTYS +++ L  CG +D+  A+  +M  +   PD   Y +LV    KAG + +A
Sbjct: 258 GCAPDVVTYSTIIDGLCRCGDVDKGFALLEKMVSRGCKPDVVTYTVLVTGLCKAGKMVEA 317

Query: 590 WEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTY-TLLLS 648
               + ML+ G  PN  T + +     ++ +L  A  LL  + + G    +  + TLLLS
Sbjct: 318 CRLVKRMLEDGCTPNAVTYSLVFDGLCKIDKLDMANDLLTSIRDKGRVTDVVAFETLLLS 377



 Score =  134 bits (338), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 95/295 (32%), Positives = 150/295 (50%), Gaps = 10/295 (3%)

Query: 359 DEHTYTTMVGILGRARQFGAINKLLDQMVRD-GCQPNVVTYNRLIHSYGRANYLNEALDV 417
           D +TY  +V     A +  A   LL +M +  G  P    YN  +H+  ++  + EA++V
Sbjct: 17  DNYTYFVLVRAHCLAGELQAAMDLLREMEQQPGMAPTPSMYNFFVHALCKSGKVPEAMEV 76

Query: 418 FKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGK 477
            K M+   C+PD VT+ TLI    KAG LD A  +  +M+ +G + +  TY+ +IN L  
Sbjct: 77  VKNMKDGACKPDVVTFNTLIAGLCKAGRLDEAQQVLDEMERSGFAANLVTYNTLINGLSS 136

Query: 478 AGHLQAAHQLFCEMVNQG--CIPNLVTYNIMIALQAKARNYQSALKLYRDM-QNAGFEPD 534
           AG    A      +V QG    P+  TYN +I    K+     A     +M Q AG  PD
Sbjct: 137 AGRSGEAV-----LVMQGMTTTPDTQTYNAIIHGFCKSGEIDRAYGFLEEMKQRAGCSPD 191

Query: 535 KVTYSIVMEVLGHCGYLDEAEAVFAEM-RRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWY 593
             TYSI++  L     L +A+ +  EM  RK+       +  LVD + KA ++ +A E  
Sbjct: 192 TFTYSILINGLCKSSNLRKADELLQEMIGRKDCCASVVAFNTLVDGYCKAQDLDRARELL 251

Query: 594 EAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
            +ML+ G  P+V T ++++    R G +   + LL+ M++ G KP + TYT+L++
Sbjct: 252 SSMLEHGCAPDVVTYSTIIDGLCRCGDVDKGFALLEKMVSRGCKPDVVTYTVLVT 306



 Score =  114 bits (284), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 63/201 (31%), Positives = 104/201 (51%), Gaps = 1/201 (0%)

Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMV-RDGCQPNVVTYNRL 401
           A GF   ++++AG   D  TY+ ++  L ++      ++LL +M+ R  C  +VV +N L
Sbjct: 175 AYGFLEEMKQRAGCSPDTFTYSILINGLCKSSNLRKADELLQEMIGRKDCCASVVAFNTL 234

Query: 402 IHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGL 461
           +  Y +A  L+ A ++   M   GC PD VTY T+ID   + G +D    + +KM + G 
Sbjct: 235 VDGYCKAQDLDRARELLSSMLEHGCAPDVVTYSTIIDGLCRCGDVDKGFALLEKMVSRGC 294

Query: 462 SPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALK 521
            PD  TY+V++  L KAG +  A +L   M+  GC PN VTY+++     K      A  
Sbjct: 295 KPDVVTYTVLVTGLCKAGKMVEACRLVKRMLEDGCTPNAVTYSLVFDGLCKIDKLDMAND 354

Query: 522 LYRDMQNAGFEPDKVTYSIVM 542
           L   +++ G   D V +  ++
Sbjct: 355 LLTSIRDKGRVTDVVAFETLL 375



 Score = 67.0 bits (162), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 58/214 (27%), Positives = 95/214 (44%), Gaps = 7/214 (3%)

Query: 276 REMKIPAGLAPFSRHFASTGNVVESVSRILRQWKWGPLAEEALGNTNYSMDAYQANQVLK 335
            EMK  AG +P +  ++   N +   S +    K   L +E +G  +        N ++ 
Sbjct: 180 EEMKQRAGCSPDTFTYSILINGLCKSSNL---RKADELLQEMIGRKDCCASVVAFNTLVD 236

Query: 336 ---QLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQ 392
              + QD   A    + +    G   D  TY+T++  L R         LL++MV  GC+
Sbjct: 237 GYCKAQDLDRARELLSSMLEH-GCAPDVVTYSTIIDGLCRCGDVDKGFALLEKMVSRGCK 295

Query: 393 PNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDM 452
           P+VVTY  L+    +A  + EA  + K+M   GC P+ VTY  + D   K   LD+A D+
Sbjct: 296 PDVVTYTVLVTGLCKAGKMVEACRLVKRMLEDGCTPNAVTYSLVFDGLCKIDKLDMANDL 355

Query: 453 YKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQ 486
              ++  G   D   +  ++  + K    +AA Q
Sbjct: 356 LTSIRDKGRVTDVVAFETLLLSVKKRLLDRAAFQ 389


>gi|255547341|ref|XP_002514728.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223546332|gb|EEF47834.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 517

 Score =  149 bits (376), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 88/284 (30%), Positives = 142/284 (50%), Gaps = 6/284 (2%)

Query: 362 TYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQM 421
           TY  +V    R         L+ +MV+ G +P VV Y  LIH     + L EA  +F+QM
Sbjct: 188 TYNVLVDACCRQGDVLRAKSLISEMVKKGIEPTVVIYTTLIHGLCSESKLMEAESMFRQM 247

Query: 422 QVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHL 481
           +  G  P+  TY  L+D + K   +  A+ +Y+ M   GL P+  T+ ++I+ L K   L
Sbjct: 248 KDSGVFPNLYTYNVLMDGYCKTANVKQALHLYQGMLDDGLQPNVVTFGILIDALCKVREL 307

Query: 482 QAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIV 541
            AA + F +M   G +PN+V +N +I   +KA N   A  L  +M+     PD  TYSI+
Sbjct: 308 LAARRFFVQMAKFGVVPNVVVFNSLIDGYSKAGNCSEATDLLLEMEKFKISPDVFTYSIL 367

Query: 542 MEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEA------ 595
           ++     G ++EA+ +   M ++    +  VY  L+D + K GN+ KA E ++A      
Sbjct: 368 IKNACRLGTVEEADDILKRMEKEGVPANSVVYNSLIDGYCKEGNMEKALEIFKATKFFSD 427

Query: 596 MLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPS 639
           M + GLRP+      +L   L    ++D   L   M+ +G+ P+
Sbjct: 428 MRRNGLRPDALAYAVMLQGHLNAKHMADVMMLHADMIKMGIVPN 471



 Score =  114 bits (286), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 81/318 (25%), Positives = 146/318 (45%), Gaps = 14/318 (4%)

Query: 347 FNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYG 406
           FN L +  G K +   +  ++       + G +++ L   ++ G  P V   N L++   
Sbjct: 106 FNALSQLRGSKFNPSVFGVLIIAFS---EVGLVDEALRVYLKVGAFPAVQACNALLNGLL 162

Query: 407 RANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTF 466
           + +  +   +++  M      P  VTY  L+D   + G +  A  +  +M   G+ P   
Sbjct: 163 KKSSFDIMWELYNNMVSRRLFPTVVTYNVLVDACCRQGDVLRAKSLISEMVKKGIEPTVV 222

Query: 467 TYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDM 526
            Y+ +I+ L     L  A  +F +M + G  PNL TYN+++    K  N + AL LY+ M
Sbjct: 223 IYTTLIHGLCSESKLMEAESMFRQMKDSGVFPNLYTYNVLMDGYCKTANVKQALHLYQGM 282

Query: 527 QNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNV 586
            + G +P+ VT+ I+++ L     L  A   F +M +   VP+  V+  L+D + KAGN 
Sbjct: 283 LDDGLQPNVVTFGILIDALCKVRELLAARRFFVQMAKFGVVPNVVVFNSLIDGYSKAGNC 342

Query: 587 RKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLL 646
            +A +    M +  + P+V T + L+    R+G + +A  +L+ M   G+  +   Y  L
Sbjct: 343 SEATDLLLEMEKFKISPDVFTYSILIKNACRLGTVEEADDILKRMEKEGVPANSVVYNSL 402

Query: 647 LSCCTEARSPYDMGFCHE 664
           +            G+C E
Sbjct: 403 ID-----------GYCKE 409



 Score =  103 bits (257), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 64/225 (28%), Positives = 112/225 (49%), Gaps = 6/225 (2%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           + +G   + +TY  ++    +         L   M+ DG QPNVVT+  LI +  +   L
Sbjct: 248 KDSGVFPNLYTYNVLMDGYCKTANVKQALHLYQGMLDDGLQPNVVTFGILIDALCKVREL 307

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
             A   F QM   G  P+ V + +LID ++KAG    A D+  +M+   +SPD FTYS++
Sbjct: 308 LAARRFFVQMAKFGVVPNVVVFNSLIDGYSKAGNCSEATDLLLEMEKFKISPDVFTYSIL 367

Query: 472 INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYR------D 525
           I    + G ++ A  +   M  +G   N V YN +I    K  N + AL++++      D
Sbjct: 368 IKNACRLGTVEEADDILKRMEKEGVPANSVVYNSLIDGYCKEGNMEKALEIFKATKFFSD 427

Query: 526 MQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDE 570
           M+  G  PD + Y+++++   +  ++ +   + A+M +   VP+E
Sbjct: 428 MRRNGLRPDALAYAVMLQGHLNAKHMADVMMLHADMIKMGIVPNE 472



 Score = 99.8 bits (247), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 100/419 (23%), Positives = 177/419 (42%), Gaps = 42/419 (10%)

Query: 361 HTYTTMVGILGRARQFGA---INKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDV 417
           H Y+ ++  L  A+ +     + K L Q +   C P             R N L     V
Sbjct: 63  HLYSAVIHYLTGAKVYPTARCLTKDLIQTLLQSCTPR------------RVNSL-----V 105

Query: 418 FKQM-QVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLG 476
           F  + Q+ G + +   +  LI   ++ G +D A+ +Y K+   G  P     + ++N L 
Sbjct: 106 FNALSQLRGSKFNPSVFGVLIIAFSEVGLVDEALRVYLKV---GAFPAVQACNALLNGLL 162

Query: 477 KAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKV 536
           K        +L+  MV++   P +VTYN+++    +  +   A  L  +M   G EP  V
Sbjct: 163 KKSSFDIMWELYNNMVSRRLFPTVVTYNVLVDACCRQGDVLRAKSLISEMVKKGIEPTVV 222

Query: 537 TYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAM 596
            Y+ ++  L     L EAE++F +M+     P+   Y +L+D + K  NV++A   Y+ M
Sbjct: 223 IYTTLIHGLCSESKLMEAESMFRQMKDSGVFPNLYTYNVLMDGYCKTANVKQALHLYQGM 282

Query: 597 LQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSC------C 650
           L  GL+PNV T   L+ A  +V +L  A      M   G+ P++  +  L+        C
Sbjct: 283 LDDGLQPNVVTFGILIDALCKVRELLAARRFFVQMAKFGVVPNVVVFNSLIDGYSKAGNC 342

Query: 651 TEARSPYDMGFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRESKR 710
           +EA    D+    E   +S     +F  S+           +     L+ M  E   +  
Sbjct: 343 SEAT---DLLLEMEKFKIS---PDVFTYSILIKNACRLGTVEEADDILKRMEKEGVPANS 396

Query: 711 GLVDAVVDFLHKSGLKEEAGSVWEVAA------QKNVYPDAVKEKGMSYWLINLHVMSD 763
            + ++++D   K G  E+A  +++         +  + PDA+    M    +N   M+D
Sbjct: 397 VVYNSLIDGYCKEGNMEKALEIFKATKFFSDMRRNGLRPDALAYAVMLQGHLNAKHMAD 455



 Score = 97.8 bits (242), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 65/239 (27%), Positives = 112/239 (46%), Gaps = 13/239 (5%)

Query: 322 NYSMDAYQANQVLKQLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINK 381
           N  MD Y     +KQ      AL  +  +    G + +  T+  ++  L + R+  A  +
Sbjct: 260 NVLMDGYCKTANVKQ------ALHLYQGMLDD-GLQPNVVTFGILIDALCKVRELLAARR 312

Query: 382 LLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHA 441
              QM + G  PNVV +N LI  Y +A   +EA D+  +M+     PD  TY  LI    
Sbjct: 313 FFVQMAKFGVVPNVVVFNSLIDGYSKAGNCSEATDLLLEMEKFKISPDVFTYSILIKNAC 372

Query: 442 KAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQL------FCEMVNQG 495
           + G ++ A D+ K+M+  G+  ++  Y+ +I+   K G+++ A ++      F +M   G
Sbjct: 373 RLGTVEEADDILKRMEKEGVPANSVVYNSLIDGYCKEGNMEKALEIFKATKFFSDMRRNG 432

Query: 496 CIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEA 554
             P+ + Y +M+     A++    + L+ DM   G  P++VT  +V       GYL  A
Sbjct: 433 LRPDALAYAVMLQGHLNAKHMADVMMLHADMIKMGIVPNEVTSQVVRRGYQDNGYLKSA 491


>gi|410109887|gb|AFV61023.1| pentatricopeptide repeat-containing protein 11, partial [Junellia
           succulentifolia]
          Length = 429

 Score =  149 bits (376), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 85/279 (30%), Positives = 152/279 (54%)

Query: 370 LGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPD 429
           L + + F  +    ++ +  G   ++  +N L+HS+ +   +  A  VF  +   G  P 
Sbjct: 115 LMKLKYFKLVWGFYEESLECGYPASLYFFNILMHSFCKEGEIRLAQSVFDAITKWGLRPS 174

Query: 430 RVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFC 489
            V++ TL++ + K G L+    + K MQA+G+ PD +TYSV+IN L K   +   ++LF 
Sbjct: 175 VVSFNTLMNGYIKLGDLNEXFRLKKAMQASGVQPDVYTYSVLINGLCKESKMDDXNELFD 234

Query: 490 EMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCG 549
           EM++ G +PN VT+  +I    K      A+++Y+ M +    PD VTY+ ++  L   G
Sbjct: 235 EMLDXGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLVTYNTLIYGLCKKG 294

Query: 550 YLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCN 609
            L +A+ +  EM  K   PD+  Y  L+D   K G++  A+E+   M++  +R +     
Sbjct: 295 DLKQAQDLIDEMSMKGLKPDKITYTTLIDGSCKEGDLETAFEYRXRMIKENIRLDDVAYT 354

Query: 610 SLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
           +L+S   + G+  DA  +L+ ML++GLKP + TYT++++
Sbjct: 355 ALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIIN 393



 Score =  129 bits (324), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 83/322 (25%), Positives = 159/322 (49%), Gaps = 10/322 (3%)

Query: 335 KQLQDHTVALGFFNWL------RRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVR 388
           +++ +H + L +F  +        + G+    + +  ++    +  +      + D + +
Sbjct: 109 RKVLEHLMKLKYFKLVWGFYEESLECGYPASLYFFNILMHSFCKEGEIRLAQSVFDAITK 168

Query: 389 DGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDV 448
            G +P+VV++N L++ Y +   LNE   + K MQ  G +PD  TY  LI+   K   +D 
Sbjct: 169 WGLRPSVVSFNTLMNGYIKLGDLNEXFRLKKAMQASGVQPDVYTYSVLINGLCKESKMDD 228

Query: 449 AMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIA 508
             +++ +M   GL P+  T++ +I+   K G +  A +++ +M++Q   P+LVTYN +I 
Sbjct: 229 XNELFDEMLDXGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLVTYNTLIY 288

Query: 509 LQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHC--GYLDEAEAVFAEMRRKNW 566
              K  + + A  L  +M   G +PDK+TY+ +++  G C  G L+ A      M ++N 
Sbjct: 289 GLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLID--GSCKEGDLETAFEYRXRMIKENI 346

Query: 567 VPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYH 626
             D+  Y  L+    + G    A +    ML  GL+P + T   +++ F + G +     
Sbjct: 347 RLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSK 406

Query: 627 LLQGMLNLGLKPSLQTYTLLLS 648
           L++ M   G  PS+ TY +L++
Sbjct: 407 LMKEMQRDGYVPSVVTYNVLMN 428



 Score = 57.0 bits (136), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 34/139 (24%), Positives = 72/139 (51%), Gaps = 1/139 (0%)

Query: 517 QSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLL 576
           + A++ YR  +   F     T   V+E L    Y       + E     +      + +L
Sbjct: 87  RDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFYEESLECGYPASLYFFNIL 146

Query: 577 VDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGL 636
           +  + K G +R A   ++A+ + GLRP+V + N+L++ ++++G L++ + L + M   G+
Sbjct: 147 MHSFCKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLNEXFRLKKAMQASGV 206

Query: 637 KPSLQTYTLLLS-CCTEAR 654
           +P + TY++L++  C E++
Sbjct: 207 QPDVYTYSVLINGLCKESK 225


>gi|255542744|ref|XP_002512435.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223548396|gb|EEF49887.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 546

 Score =  149 bits (376), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 91/319 (28%), Positives = 161/319 (50%), Gaps = 14/319 (4%)

Query: 328 YQANQVLKQLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMV 387
           Y+A+ +LK++              R  G   +E T+  ++    + +   A  K+  +M 
Sbjct: 218 YKADAILKEM--------------RADGICPNEVTFNILIDGFCKDKNVSAAMKVFAEMN 263

Query: 388 RDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLD 447
           R G +PNVVTYN LI+       +NEA  +  QM     +P+ +T+  L++   K   + 
Sbjct: 264 RQGVKPNVVTYNSLINGLCNNGKVNEATALRDQMVNSCLKPNIITHNALLNGFCKNKMVK 323

Query: 448 VAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMI 507
            A +++  M   G++P+  TY+++I+   K  +++ A  L+  M+ +G  P++ TYN +I
Sbjct: 324 QAGELFDDMPKQGITPNVTTYNILIDAYCKDENMEDAFALYRIMLGKGVCPDVSTYNCLI 383

Query: 508 ALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWV 567
           A   +  + ++A  L  +M     + D +TY+I+++ L + G + +A  +  EM RK   
Sbjct: 384 AGLCRKGDLEAARNLVSEMDTKHLKADLITYNILIDSLCNKGEMKKALRLLDEMCRKGLK 443

Query: 568 PDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHL 627
           P +  Y  ++D + K GN+R A      M + G   NV T N L+  F +  +L DA  L
Sbjct: 444 PSQLTYNTMIDGYCKEGNLRAALNLRSQMEKVGRLANVATYNVLIKGFCKKDKLEDANGL 503

Query: 628 LQGMLNLGLKPSLQTYTLL 646
           L  ML  GL P+  TY ++
Sbjct: 504 LNEMLEKGLIPNRMTYEIV 522



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 94/318 (29%), Positives = 160/318 (50%), Gaps = 4/318 (1%)

Query: 362 TYTTMVGILGRARQFGAINK---LLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVF 418
           TY T++    +  + G + K   +L +M  DG  PN VT+N LI  + +   ++ A+ VF
Sbjct: 200 TYNTLIDGYCKMGKIGKMYKADAILKEMRADGICPNEVTFNILIDGFCKDKNVSAAMKVF 259

Query: 419 KQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKA 478
            +M   G +P+ VTY +LI+     G ++ A  +  +M  + L P+  T++ ++N   K 
Sbjct: 260 AEMNRQGVKPNVVTYNSLINGLCNNGKVNEATALRDQMVNSCLKPNIITHNALLNGFCKN 319

Query: 479 GHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTY 538
             ++ A +LF +M  QG  PN+ TYNI+I    K  N + A  LYR M   G  PD  TY
Sbjct: 320 KMVKQAGELFDDMPKQGITPNVTTYNILIDAYCKDENMEDAFALYRIMLGKGVCPDVSTY 379

Query: 539 SIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQ 598
           + ++  L   G L+ A  + +EM  K+   D   Y +L+D     G ++KA    + M +
Sbjct: 380 NCLIAGLCRKGDLEAARNLVSEMDTKHLKADLITYNILIDSLCNKGEMKKALRLLDEMCR 439

Query: 599 AGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS-CCTEARSPY 657
            GL+P+  T N+++  + + G L  A +L   M  +G   ++ TY +L+   C + +   
Sbjct: 440 KGLKPSQLTYNTMIDGYCKEGNLRAALNLRSQMEKVGRLANVATYNVLIKGFCKKDKLED 499

Query: 658 DMGFCHELMAVSGHPAHM 675
             G  +E++     P  M
Sbjct: 500 ANGLLNEMLEKGLIPNRM 517



 Score =  146 bits (368), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 110/452 (24%), Positives = 209/452 (46%), Gaps = 17/452 (3%)

Query: 324 SMDAYQANQVLKQL------QDHTVALGFFNWLR-RQAGFKHDEHTYTTMVGILGRARQF 376
           S D++ AN ++  +      ++    LGF  + R    G K    +   ++  L +  + 
Sbjct: 85  SGDSFCANSIIVDILVWAYAKNLRTRLGFEAFKRASDYGLKLSVTSCNPLMSGLVKVGEI 144

Query: 377 GAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTL 436
           G +  +  +M+R   +P ++++N +I+   +   LN+A D+ + M+V G   + +TY TL
Sbjct: 145 GDMEFVYKEMIRRRIEPTLISFNIVINGLCKVGKLNKAGDIIEDMKVRGVSANVITYNTL 204

Query: 437 IDIHAKAGFLD---VAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVN 493
           ID + K G +     A  + K+M+A G+ P+  T++++I+   K  ++ AA ++F EM  
Sbjct: 205 IDGYCKMGKIGKMYKADAILKEMRADGICPNEVTFNILIDGFCKDKNVSAAMKVFAEMNR 264

Query: 494 QGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDE 553
           QG  PN+VTYN +I           A  L   M N+  +P+ +T++ ++        + +
Sbjct: 265 QGVKPNVVTYNSLINGLCNNGKVNEATALRDQMVNSCLKPNIITHNALLNGFCKNKMVKQ 324

Query: 554 AEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLS 613
           A  +F +M ++   P+   Y +L+D + K  N+  A+  Y  ML  G+ P+V T N L++
Sbjct: 325 AGELFDDMPKQGITPNVTTYNILIDAYCKDENMEDAFALYRIMLGKGVCPDVSTYNCLIA 384

Query: 614 AFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL-SCCTEARSPYDMGFCHELMAVSGHP 672
              R G L  A +L+  M    LK  L TY +L+ S C +      +    E+      P
Sbjct: 385 GLCRKGDLEAARNLVSEMDTKHLKADLITYNILIDSLCNKGEMKKALRLLDEMCRKGLKP 444

Query: 673 AHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRESKRGLVDAVVDFLHKSGLKEEAGSV 732
           + +   +M        N+R  + +    M    R +     + ++    K    E+A  +
Sbjct: 445 SQLTYNTMIDGYCKEGNLRAAL-NLRSQMEKVGRLANVATYNVLIKGFCKKDKLEDANGL 503

Query: 733 WEVAAQKNVYPDAVKEKGMSYWLINLHVMSDG 764
                +K + P+      M+Y ++   +M  G
Sbjct: 504 LNEMLEKGLIPNR-----MTYEIVTEEMMEKG 530



 Score = 89.4 bits (220), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 65/235 (27%), Positives = 108/235 (45%), Gaps = 7/235 (2%)

Query: 322 NYSMDAYQANQVLKQLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINK 381
           N  ++ +  N+++KQ      A   F+ + +Q G   +  TY  ++    +         
Sbjct: 310 NALLNGFCKNKMVKQ------AGELFDDMPKQ-GITPNVTTYNILIDAYCKDENMEDAFA 362

Query: 382 LLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHA 441
           L   M+  G  P+V TYN LI    R   L  A ++  +M     + D +TY  LID   
Sbjct: 363 LYRIMLGKGVCPDVSTYNCLIAGLCRKGDLEAARNLVSEMDTKHLKADLITYNILIDSLC 422

Query: 442 KAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLV 501
             G +  A+ +  +M   GL P   TY+ +I+   K G+L+AA  L  +M   G + N+ 
Sbjct: 423 NKGEMKKALRLLDEMCRKGLKPSQLTYNTMIDGYCKEGNLRAALNLRSQMEKVGRLANVA 482

Query: 502 TYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEA 556
           TYN++I    K    + A  L  +M   G  P+++TY IV E +   G++ + E 
Sbjct: 483 TYNVLIKGFCKKDKLEDANGLLNEMLEKGLIPNRMTYEIVTEEMMEKGFVPDIEG 537



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 39/186 (20%), Positives = 81/186 (43%), Gaps = 14/186 (7%)

Query: 482 QAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIV 541
           Q   Q+   +       N +  +I++   AK    +   + ++   + G +    + + +
Sbjct: 75  QEQTQILLSVSGDSFCANSIIVDILVWAYAKNLRTRLGFEAFKRASDYGLKLSVTSCNPL 134

Query: 542 MEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGL 601
           M  L   G + + E V+ EM R+   P    + ++++   K G + KA +  E M   G+
Sbjct: 135 MSGLVKVGEIGDMEFVYKEMIRRRIEPTLISFNIVINGLCKVGKLNKAGDIIEDMKVRGV 194

Query: 602 RPNVPTCNSLLSAFLRVGQLSDAYH---LLQGMLNLGLKPSLQTYTLLLSCCTEARSPYD 658
             NV T N+L+  + ++G++   Y    +L+ M   G+ P+  T+ +L+           
Sbjct: 195 SANVITYNTLIDGYCKMGKIGKMYKADAILKEMRADGICPNEVTFNILID---------- 244

Query: 659 MGFCHE 664
            GFC +
Sbjct: 245 -GFCKD 249


>gi|363543233|ref|NP_001241831.1| uncharacterized protein LOC100857030 [Zea mays]
 gi|224033903|gb|ACN36027.1| unknown [Zea mays]
          Length = 655

 Score =  149 bits (376), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 82/293 (27%), Positives = 148/293 (50%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           G K +   Y T++  L  A ++    +LL +M    C  + VT+N L+  + +   ++  
Sbjct: 327 GLKPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRV 386

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
           +++ +QM   GC PD +TY T+I+   K G +D A+ + K M A G  P+T +Y++++  
Sbjct: 387 IELLEQMLERGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKG 446

Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPD 534
           L  A     A  L  +M+ QGC  N +T+N +I    K    + A++L + M   G  PD
Sbjct: 447 LCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIELLKQMLVNGCSPD 506

Query: 535 KVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYE 594
            ++YS V++ LG  G  DEA  +   M  K   P+  +Y  +     + G + K  + ++
Sbjct: 507 LISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSREGRINKVIQMFD 566

Query: 595 AMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
            +    +R +    N+++S+  + G+   A   L  M++ G  P+  TYT+L+
Sbjct: 567 NIQDTTIRSDAVLYNAVISSLCKRGETERAIEFLAYMVSSGCVPNESTYTILI 619



 Score =  142 bits (357), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 93/334 (27%), Positives = 154/334 (46%), Gaps = 2/334 (0%)

Query: 316 EALGNTNYSMDAYQANQVLKQLQDHTVALGFFNWLRRQAGF--KHDEHTYTTMVGILGRA 373
           E L     ++D    N VL  + D        + LR    F  + D  +Y  ++  L  A
Sbjct: 181 EDLHARGCALDVGNCNLVLNAICDQGSVDEALHLLRDLPSFGCEPDVVSYNAVLKGLCMA 240

Query: 374 RQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTY 433
           +++G + +L+++MVR  C PN+VT+N LI    R        +V  QM   GC PD   Y
Sbjct: 241 KRWGCVQELMEEMVRMACPPNIVTFNTLISYLCRNGLFERVHEVLAQMVEHGCTPDIRMY 300

Query: 434 CTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVN 493
            T+ID   K G L+VA ++  +M + GL P+   Y+ ++  L  A   +   +L  EM +
Sbjct: 301 ATIIDGICKEGHLEVAHEILNRMPSYGLKPNVVCYNTLLKGLCSAERWEETEELLAEMFD 360

Query: 494 QGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDE 553
           + C  + VT+NI++    +       ++L   M   G  PD +TY+ V+      G +DE
Sbjct: 361 KDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLERGCMPDVITYTTVINGFCKEGLIDE 420

Query: 554 AEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLS 613
           A  +   M      P+   Y +++     A     A +    M+Q G   N  T N+L++
Sbjct: 421 AVMLLKSMTACGCKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLIN 480

Query: 614 AFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
              + G +  A  LL+ ML  G  P L +Y+ ++
Sbjct: 481 FLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVI 514



 Score =  129 bits (323), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 89/375 (23%), Positives = 171/375 (45%)

Query: 372 RARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRV 431
           R   F +  ++L+ +   GC  +V   N ++++      ++EAL + + +   GCEPD V
Sbjct: 169 RGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSVDEALHLLRDLPSFGCEPDVV 228

Query: 432 TYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEM 491
           +Y  ++     A       ++ ++M      P+  T++ +I+ L + G  +  H++  +M
Sbjct: 229 SYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLISYLCRNGLFERVHEVLAQM 288

Query: 492 VNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYL 551
           V  GC P++  Y  +I    K  + + A ++   M + G +P+ V Y+ +++ L      
Sbjct: 289 VEHGCTPDIRMYATIIDGICKEGHLEVAHEILNRMPSYGLKPNVVCYNTLLKGLCSAERW 348

Query: 552 DEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSL 611
           +E E + AEM  K+   D+  + +LVD + + G V +  E  E ML+ G  P+V T  ++
Sbjct: 349 EETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLERGCMPDVITYTTV 408

Query: 612 LSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGFCHELMAVSGH 671
           ++ F + G + +A  LL+ M   G KP+  +YT++L     A    D       M   G 
Sbjct: 409 INGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQGC 468

Query: 672 PAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRESKRGLVDAVVDFLHKSGLKEEAGS 731
           P +    +        + + +     L+ M              V+D L K+G  +EA  
Sbjct: 469 PLNPITFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEALE 528

Query: 732 VWEVAAQKNVYPDAV 746
           +  V   K + P+ +
Sbjct: 529 LLNVMVNKGMSPNTI 543



 Score =  124 bits (312), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 72/277 (25%), Positives = 135/277 (48%)

Query: 359 DEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVF 418
           D+ T+  +V    +      + +LL+QM+  GC P+V+TY  +I+ + +   ++EA+ + 
Sbjct: 366 DDVTFNILVDFFCQNGLVDRVIELLEQMLERGCMPDVITYTTVINGFCKEGLIDEAVMLL 425

Query: 419 KQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKA 478
           K M   GC+P+ ++Y  ++     A     A D+  +M   G   +  T++ +IN L K 
Sbjct: 426 KSMTACGCKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKK 485

Query: 479 GHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTY 538
           G ++ A +L  +M+  GC P+L++Y+ +I    KA     AL+L   M N G  P+ + Y
Sbjct: 486 GLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIY 545

Query: 539 SIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQ 598
           S +   L   G +++   +F  ++      D  +Y  ++    K G   +A E+   M+ 
Sbjct: 546 SSIASALSREGRINKVIQMFDNIQDTTIRSDAVLYNAVISSLCKRGETERAIEFLAYMVS 605

Query: 599 AGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLG 635
           +G  PN  T   L+      G + +A  +L  + + G
Sbjct: 606 SGCVPNESTYTILIRGLASEGFVKEAQEMLTELCSKG 642



 Score =  120 bits (301), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 71/248 (28%), Positives = 119/248 (47%)

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
           + G   D  TYTT++    +         LL  M   GC+PN ++Y  ++     A    
Sbjct: 395 ERGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLCSAERWV 454

Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
           +A D+  QM   GC  + +T+ TLI+   K G ++ A+++ K+M   G SPD  +YS +I
Sbjct: 455 DAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVI 514

Query: 473 NCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFE 532
           + LGKAG    A +L   MVN+G  PN + Y+ + +  ++       ++++ ++Q+    
Sbjct: 515 DGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSREGRINKVIQMFDNIQDTTIR 574

Query: 533 PDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEW 592
            D V Y+ V+  L   G  + A    A M     VP+E  Y +L+      G V++A E 
Sbjct: 575 SDAVLYNAVISSLCKRGETERAIEFLAYMVSSGCVPNESTYTILIRGLASEGFVKEAQEM 634

Query: 593 YEAMLQAG 600
              +   G
Sbjct: 635 LTELCSKG 642



 Score = 97.1 bits (240), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 109/493 (22%), Positives = 188/493 (38%), Gaps = 79/493 (16%)

Query: 363 YTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQ 422
           Y  MV    RA Q  +  +L   +      PN  TY  ++ +      + +AL V  +M 
Sbjct: 93  YNAMVAGYCRAGQLESARRLAAAV---PVPPNAYTYFPVVRALCARGRIADALAVLDEMP 149

Query: 423 VVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQ 482
             GC P    Y  +++   + G    A+ + + + A G + D    ++++N +   G + 
Sbjct: 150 RRGCAPIPPMYHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSVD 209

Query: 483 AAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVM 542
            A  L  ++ + GC P++V+YN ++     A+ +    +L  +M      P+ VT++ ++
Sbjct: 210 EALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLI 269

Query: 543 EVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLR 602
             L   G  +    V A+M      PD  +Y  ++D   K G++  A E    M   GL+
Sbjct: 270 SYLCRNGLFERVHEVLAQMVEHGCTPDIRMYATIIDGICKEGHLEVAHEILNRMPSYGLK 329

Query: 603 PNVPTCNSLLSA-----------------------------------FLRVGQLSDAYHL 627
           PNV   N+LL                                     F + G +     L
Sbjct: 330 PNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIEL 389

Query: 628 LQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGFCHELMAVSGHPAHMFLLSMPSPGPDG 687
           L+ ML  G  P + TYT +++           GFC E +      A M L SM + G   
Sbjct: 390 LEQMLERGCMPDVITYTTVIN-----------GFCKEGLI---DEAVMLLKSMTACGCKP 435

Query: 688 QN-----VRDHVGSFLEMMHSEDRES---KRGL------VDAVVDFLHKSGLKEEAGSVW 733
                  V   + S    + +ED  S   ++G        + +++FL K GL E+A  + 
Sbjct: 436 NTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIELL 495

Query: 734 EVAAQKNVYPDAVKEKGMSYWLINLHVMSDGTAVIALSRTLAWFRKQMLISGVGPSRI-- 791
           +        PD          LI+   + DG      +         M+  G+ P+ I  
Sbjct: 496 KQMLVNGCSPD----------LISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIY 545

Query: 792 -DIVTGWGRRSRV 803
             I +   R  R+
Sbjct: 546 SSIASALSREGRI 558


>gi|15237575|ref|NP_198933.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75309191|sp|Q9FLL3.1|PP412_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g41170, mitochondrial; Flags: Precursor
 gi|9759163|dbj|BAB09719.1| salt-inducible protein-like [Arabidopsis thaliana]
 gi|66792708|gb|AAY56456.1| At5g41170 [Arabidopsis thaliana]
 gi|332007267|gb|AED94650.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 527

 Score =  149 bits (376), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 89/325 (27%), Positives = 165/325 (50%), Gaps = 1/325 (0%)

Query: 325 MDAYQANQVLKQLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLD 384
           +D  +   V+ +++   V +   + L+   G  HD +T   ++    ++ Q    +  L 
Sbjct: 73  IDFTKLLNVIAKMKKFDVVINLCDHLQIM-GVSHDLYTCNLLMNCFCQSSQPYLASSFLG 131

Query: 385 QMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAG 444
           +M++ G +P++VT+  LI+ +   N + EA+ +  QM  +G +PD V Y T+ID   K G
Sbjct: 132 KMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNG 191

Query: 445 FLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYN 504
            ++ A+ ++ +M+  G+ PD   Y+ ++N L  +G  + A  L   M  +   P+++T+N
Sbjct: 192 HVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFN 251

Query: 505 IMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRK 564
            +I    K   +  A +LY +M      P+  TY+ ++      G +DEA  +F  M  K
Sbjct: 252 ALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETK 311

Query: 565 NWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDA 624
              PD   Y  L++ + K   V  A + +  M Q GL  N  T  +L+  F +VG+ + A
Sbjct: 312 GCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVA 371

Query: 625 YHLLQGMLNLGLKPSLQTYTLLLSC 649
             +   M++ G+ P+++TY +LL C
Sbjct: 372 QEVFSHMVSRGVPPNIRTYNVLLHC 396



 Score =  139 bits (351), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 82/278 (29%), Positives = 146/278 (52%), Gaps = 3/278 (1%)

Query: 357 KHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALD 416
           K D  T+  ++    +  +F    +L ++M+R    PN+ TY  LI+ +     ++EA  
Sbjct: 244 KPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQ 303

Query: 417 VFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLG 476
           +F  M+  GC PD V Y +LI+   K   +D AM ++ +M   GL+ +T TY+ +I   G
Sbjct: 304 MFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFG 363

Query: 477 KAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNA---GFEP 533
           + G    A ++F  MV++G  PN+ TYN+++         + AL ++ DMQ     G  P
Sbjct: 364 QVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAP 423

Query: 534 DKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWY 593
           +  TY++++  L + G L++A  VF +MR++        Y +++    KAG V+ A   +
Sbjct: 424 NIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLF 483

Query: 594 EAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGM 631
            ++   G++PNV T  +++S   R G   +A+ L + M
Sbjct: 484 CSLPSKGVKPNVVTYTTMISGLFREGLKHEAHVLFRKM 521



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 83/283 (29%), Positives = 138/283 (48%), Gaps = 5/283 (1%)

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
           + G K D   YTT++  L +         L DQM   G +P+VV Y  L++    +    
Sbjct: 170 EMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWR 229

Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAG-FLDVAMDMYKKMQAAGLSPDTFTYSVI 471
           +A  + + M     +PD +T+  LID   K G FLD A ++Y +M    ++P+ FTY+ +
Sbjct: 230 DADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLD-AEELYNEMIRMSIAPNIFTYTSL 288

Query: 472 INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF 531
           IN     G +  A Q+F  M  +GC P++V Y  +I    K +    A+K++ +M   G 
Sbjct: 289 INGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGL 348

Query: 532 EPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWE 591
             + +TY+ +++  G  G  + A+ VF+ M  +   P+   Y +L+      G V+KA  
Sbjct: 349 TGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALM 408

Query: 592 WYEAMLQA---GLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGM 631
            +E M +    G+ PN+ T N LL      G+L  A  + + M
Sbjct: 409 IFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDM 451



 Score =  116 bits (290), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 69/253 (27%), Positives = 127/253 (50%), Gaps = 6/253 (2%)

Query: 411 LNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSV 470
            NEALD+F  M      P  + +  L+++ AK    DV +++   +Q  G+S D +T ++
Sbjct: 53  FNEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCNL 112

Query: 471 IINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAG 530
           ++NC  ++     A     +M+  G  P++VT+  +I         + A+ +   M   G
Sbjct: 113 LMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMG 172

Query: 531 FEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAW 590
            +PD V Y+ +++ L   G+++ A ++F +M      PD  +Y  LV+    +G  R A 
Sbjct: 173 IKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDAD 232

Query: 591 EWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS-- 648
                M +  ++P+V T N+L+ AF++ G+  DA  L   M+ + + P++ TYT L++  
Sbjct: 233 SLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGF 292

Query: 649 ----CCTEARSPY 657
               C  EAR  +
Sbjct: 293 CMEGCVDEARQMF 305



 Score =  111 bits (278), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 68/274 (24%), Positives = 126/274 (45%)

Query: 375 QFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYC 434
           QF     L   MV     P+++ + +L++   +    +  +++   +Q++G   D  T  
Sbjct: 52  QFNEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCN 111

Query: 435 TLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQ 494
            L++   ++    +A     KM   G  PD  T++ +IN       ++ A  +  +MV  
Sbjct: 112 LLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEM 171

Query: 495 GCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEA 554
           G  P++V Y  +I    K  +   AL L+  M+N G  PD V Y+ ++  L + G   +A
Sbjct: 172 GIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDA 231

Query: 555 EAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSA 614
           +++   M ++   PD   +  L+D + K G    A E Y  M++  + PN+ T  SL++ 
Sbjct: 232 DSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLING 291

Query: 615 FLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
           F   G + +A  +   M   G  P +  YT L++
Sbjct: 292 FCMEGCVDEARQMFYLMETKGCFPDVVAYTSLIN 325



 Score = 73.9 bits (180), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 58/218 (26%), Positives = 108/218 (49%), Gaps = 3/218 (1%)

Query: 349 WLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRA 408
           +L    G   D   YT+++    + ++     K+  +M + G   N +TY  LI  +G+ 
Sbjct: 306 YLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQV 365

Query: 409 NYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAA---GLSPDT 465
              N A +VF  M   G  P+  TY  L+      G +  A+ +++ MQ     G++P+ 
Sbjct: 366 GKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNI 425

Query: 466 FTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRD 525
           +TY+V+++ L   G L+ A  +F +M  +     ++TY I+I    KA   ++A+ L+  
Sbjct: 426 WTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFCS 485

Query: 526 MQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRR 563
           + + G +P+ VTY+ ++  L   G   EA  +F +M+ 
Sbjct: 486 LPSKGVKPNVVTYTTMISGLFREGLKHEAHVLFRKMKE 523



 Score = 73.6 bits (179), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 55/181 (30%), Positives = 91/181 (50%), Gaps = 3/181 (1%)

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
           Q G   +  TYTT++   G+  +     ++   MV  G  PN+ TYN L+H       + 
Sbjct: 345 QKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVK 404

Query: 413 EALDVFKQMQ---VVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYS 469
           +AL +F+ MQ   + G  P+  TY  L+      G L+ A+ +++ M+   +     TY+
Sbjct: 405 KALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYT 464

Query: 470 VIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNA 529
           +II  + KAG ++ A  LFC + ++G  PN+VTY  MI+   +      A  L+R M+  
Sbjct: 465 IIIQGMCKAGKVKNAVNLFCSLPSKGVKPNVVTYTTMISGLFREGLKHEAHVLFRKMKED 524

Query: 530 G 530
           G
Sbjct: 525 G 525


>gi|224713518|gb|ACN62066.1| PPR-817 [Zea mays]
          Length = 817

 Score =  149 bits (375), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 88/295 (29%), Positives = 146/295 (49%)

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
           Q G   D  TY ++V  L +AR        L QMV     PN  TYN LI+ Y       
Sbjct: 250 QRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQWK 309

Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
           EA+ VFK+M+     PD VT   L+    K G +  A D++  M   G +PD F+Y++++
Sbjct: 310 EAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIML 369

Query: 473 NCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFE 532
           N     G L     LF  M+  G  P+  T+N++I   A       A+ ++ +M++ G +
Sbjct: 370 NGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVK 429

Query: 533 PDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEW 592
           PD VTY  V+  L   G +D+A   F +M  +   PD+  Y  L+  +   G++ KA E 
Sbjct: 430 PDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKEL 489

Query: 593 YEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
              ++  G+  ++   +S+++   ++G++ DA ++    +N+GL P    Y +L+
Sbjct: 490 ISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLM 544



 Score =  141 bits (355), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 125/490 (25%), Positives = 227/490 (46%), Gaps = 38/490 (7%)

Query: 342 VALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRL 401
           +AL FF  L R     +       + G     R   A++ LL +    GC P+V +Y+ L
Sbjct: 132 LALAFFGQLLRTGLRVNIIIANHLLEGFCEAKRTDEALDILLHRTPELGCVPDVFSYSIL 191

Query: 402 IHSYGRANYLNEALDVFKQMQVVG--CEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAA 459
           + S        +A D+ + M   G  C P+ V Y T+ID   K G ++ A D++K+M   
Sbjct: 192 LKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNTVIDGFFKEGDVNKACDLFKEMVQR 251

Query: 460 GLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSA 519
           G+ PD  TY+ +++ L KA  +  A     +MVN+  +PN  TYN +I   +    ++ A
Sbjct: 252 GIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEA 311

Query: 520 LKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDL 579
           ++++++M+     PD VT S++M  L   G + EA  VF  M  K   PD   Y ++++ 
Sbjct: 312 VRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNG 371

Query: 580 WGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPS 639
           +   G +    + ++ ML  G+ P+  T N L+ A+   G L  A  +   M + G+KP 
Sbjct: 372 YATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPD 431

Query: 640 LQTY-TLLLSCCTEARSPYDMGFCHELMAVSGHP---AHMFLLSMPSPGPDGQNVRDHVG 695
           + TY T++ + C   +    M   ++++     P   A+  L+         Q    H G
Sbjct: 432 VVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLI---------QGFCTH-G 481

Query: 696 SFLEMMHSEDRESKRGL------VDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAVKEK 749
           S L+           G+        ++++ L K G   +A +++++     ++PDAV   
Sbjct: 482 SLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVV-- 539

Query: 750 GMSYWLINLHVMSDGTAVIA-LSRTLAWFRKQMLISGVGPSRI---DIVTGWGRRSRV-T 804
                    +++ DG  ++  + + L  F   M+ +G+ P+ +    +V G+ +  R+  
Sbjct: 540 --------YNMLMDGYCLVGKMEKALRVF-DAMVSAGIEPNVVGYGTLVNGYCKIGRIDE 590

Query: 805 GTSLVRQAVQ 814
           G SL R+ +Q
Sbjct: 591 GLSLFREMLQ 600



 Score =  129 bits (325), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 77/271 (28%), Positives = 135/271 (49%), Gaps = 4/271 (1%)

Query: 379 INKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLID 438
           +  L D M+ DG  P+  T+N LI +Y     L++A+ +F +M+  G +PD VTY T+I 
Sbjct: 381 MTDLFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIA 440

Query: 439 IHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIP 498
              + G +D AM+ + +M   G++PD + Y+ +I      G L  A +L  E++N G   
Sbjct: 441 ALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHL 500

Query: 499 NLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHC--GYLDEAEA 556
           ++V ++ +I    K      A  ++    N G  PD V Y+++M+  G+C  G +++A  
Sbjct: 501 DIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMD--GYCLVGKMEKALR 558

Query: 557 VFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFL 616
           VF  M      P+   YG LV+ + K G + +    +  MLQ G++P+    + ++    
Sbjct: 559 VFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLF 618

Query: 617 RVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
             G+   A      M   G+   + TY ++L
Sbjct: 619 EAGRTVPAKMKFHEMTESGIAMDICTYNIVL 649



 Score =  123 bits (308), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 72/270 (26%), Positives = 134/270 (49%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           G   D   +++++  L +  +      + D  V  G  P+ V YN L+  Y     + +A
Sbjct: 497 GMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKA 556

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
           L VF  M   G EP+ V Y TL++ + K G +D  + ++++M   G+ P T  YS+II+ 
Sbjct: 557 LRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDG 616

Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPD 534
           L +AG    A   F EM   G   ++ TYNI++    K R +  A+ L+++++    + +
Sbjct: 617 LFEAGRTVPAKMKFHEMTESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKIN 676

Query: 535 KVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYE 594
            +T + +++ +     ++EA+ +FA + R   VP    Y +++    K G V +A + + 
Sbjct: 677 IITLNTMIDGMFQTRRVEEAKDLFASISRSRLVPSVVTYSIMITNLIKEGLVEEAEDMFS 736

Query: 595 AMLQAGLRPNVPTCNSLLSAFLRVGQLSDA 624
           +M  AG  PN    N ++   L+  ++  A
Sbjct: 737 SMQNAGCEPNSRLLNHVVRELLKKNEIVRA 766



 Score =  115 bits (289), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 76/302 (25%), Positives = 142/302 (47%), Gaps = 4/302 (1%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           G   D +T+  ++              + ++M   G +P+VVTY  +I +  R   +++A
Sbjct: 392 GIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDA 451

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
           ++ F QM   G  PD+  Y  LI      G L  A ++  ++   G+  D   +S IIN 
Sbjct: 452 MEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINN 511

Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPD 534
           L K G +  A  +F   VN G  P+ V YN+++         + AL+++  M +AG EP+
Sbjct: 512 LCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPN 571

Query: 535 KVTYSIVMEVLGHC--GYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEW 592
            V Y  ++   G+C  G +DE  ++F EM ++   P   +Y +++D   +AG    A   
Sbjct: 572 VVGYGTLVN--GYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFEAGRTVPAKMK 629

Query: 593 YEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTE 652
           +  M ++G+  ++ T N +L    +     +A  L + +  + +K ++ T   ++    +
Sbjct: 630 FHEMTESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIDGMFQ 689

Query: 653 AR 654
            R
Sbjct: 690 TR 691



 Score =  108 bits (270), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 78/326 (23%), Positives = 150/326 (46%), Gaps = 4/326 (1%)

Query: 326 DAYQANQVLKQLQDHTV---ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKL 382
           D Y  N ++K   +  +   A+  FN +R   G K D  TY T++  L R  +     + 
Sbjct: 396 DFYTFNVLIKAYANCGMLDKAMIIFNEMRDH-GVKPDVVTYRTVIAALCRIGKMDDAMEK 454

Query: 383 LDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAK 442
            +QM+  G  P+   YN LI  +     L +A ++  ++   G   D V + ++I+   K
Sbjct: 455 FNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCK 514

Query: 443 AGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVT 502
            G +  A +++      GL PD   Y+++++     G ++ A ++F  MV+ G  PN+V 
Sbjct: 515 LGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVG 574

Query: 503 YNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMR 562
           Y  ++    K       L L+R+M   G +P  + YSI+++ L   G    A+  F EM 
Sbjct: 575 YGTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFEAGRTVPAKMKFHEMT 634

Query: 563 RKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLS 622
                 D   Y +++    K     +A   ++ +    ++ N+ T N+++    +  ++ 
Sbjct: 635 ESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIDGMFQTRRVE 694

Query: 623 DAYHLLQGMLNLGLKPSLQTYTLLLS 648
           +A  L   +    L PS+ TY+++++
Sbjct: 695 EAKDLFASISRSRLVPSVVTYSIMIT 720



 Score =  106 bits (265), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 71/298 (23%), Positives = 146/298 (48%), Gaps = 3/298 (1%)

Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLI 402
           A+  FN +  Q G   D++ Y  ++             +L+ +++ +G   ++V ++ +I
Sbjct: 451 AMEKFNQMIDQ-GVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSII 509

Query: 403 HSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLS 462
           ++  +   + +A ++F     VG  PD V Y  L+D +   G ++ A+ ++  M +AG+ 
Sbjct: 510 NNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIE 569

Query: 463 PDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMI-ALQAKARNYQSALK 521
           P+   Y  ++N   K G +     LF EM+ +G  P+ + Y+I+I  L    R   + +K
Sbjct: 570 PNVVGYGTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFEAGRTVPAKMK 629

Query: 522 LYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWG 581
            + +M  +G   D  TY+IV+  L      DEA  +F E+R  N   +      ++D   
Sbjct: 630 -FHEMTESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIDGMF 688

Query: 582 KAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPS 639
           +   V +A + + ++ ++ L P+V T + +++  ++ G + +A  +   M N G +P+
Sbjct: 689 QTRRVEEAKDLFASISRSRLVPSVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPN 746



 Score =  101 bits (251), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 79/324 (24%), Positives = 126/324 (38%), Gaps = 71/324 (21%)

Query: 361 HTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQ 420
           HTY  ++    RA +         Q++R G + N++  N L+  +  A   +EALD+   
Sbjct: 115 HTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLEGFCEAKRTDEALDI--- 171

Query: 421 MQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGH 480
                                          +  +    G  PD F+YS+++  L   G 
Sbjct: 172 -------------------------------LLHRTPELGCVPDVFSYSILLKSLCDQGK 200

Query: 481 LQAAHQLFCEMVNQG--CIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTY 538
              A  L   M   G  C PN+V YN +I    K  +   A  L+++M   G  PD VTY
Sbjct: 201 SGQADDLLRMMAEGGAVCSPNVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTY 260

Query: 539 SIVMEVLGHCGYLDEAEA-----------------------------------VFAEMRR 563
           + V+  L     +D+AEA                                   VF EMRR
Sbjct: 261 NSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRR 320

Query: 564 KNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSD 623
            + +PD     +L+    K G +++A + ++ M   G  P+V + N +L+ +   G L D
Sbjct: 321 HSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVD 380

Query: 624 AYHLLQGMLNLGLKPSLQTYTLLL 647
              L   ML  G+ P   T+ +L+
Sbjct: 381 MTDLFDLMLGDGIAPDFYTFNVLI 404



 Score = 87.4 bits (215), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 61/250 (24%), Positives = 112/250 (44%), Gaps = 35/250 (14%)

Query: 381 KLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLID-- 438
           ++ D MV  G +PNVV Y  L++ Y +   ++E L +F++M   G +P  + Y  +ID  
Sbjct: 558 RVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGL 617

Query: 439 ------IHAKAGF---------------------------LDVAMDMYKKMQAAGLSPDT 465
                 + AK  F                            D A+ ++K+++A  +  + 
Sbjct: 618 FEAGRTVPAKMKFHEMTESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINI 677

Query: 466 FTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRD 525
            T + +I+ + +   ++ A  LF  +     +P++VTY+IMI    K    + A  ++  
Sbjct: 678 ITLNTMIDGMFQTRRVEEAKDLFASISRSRLVPSVVTYSIMITNLIKEGLVEEAEDMFSS 737

Query: 526 MQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGN 585
           MQNAG EP+    + V+  L     +  A A  +++  +N+  +     LLVDL+   G 
Sbjct: 738 MQNAGCEPNSRLLNHVVRELLKKNEIVRAGAYLSKIDERNFSLEHLTAMLLVDLFSSKGT 797

Query: 586 VRKAWEWYEA 595
            R+   +  A
Sbjct: 798 CREQIRFLPA 807



 Score = 74.3 bits (181), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 51/190 (26%), Positives = 96/190 (50%), Gaps = 3/190 (1%)

Query: 461 LSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSAL 520
           LSP + TY+++++C  +A   + A   F +++  G   N++  N ++    +A+    AL
Sbjct: 110 LSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLEGFCEAKRTDEAL 169

Query: 521 K-LYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWV--PDEPVYGLLV 577
             L       G  PD  +YSI+++ L   G   +A+ +   M     V  P+   Y  ++
Sbjct: 170 DILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNTVI 229

Query: 578 DLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLK 637
           D + K G+V KA + ++ M+Q G+ P++ T NS++ A  +   +  A   L+ M+N  + 
Sbjct: 230 DGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVL 289

Query: 638 PSLQTYTLLL 647
           P+  TY  L+
Sbjct: 290 PNNWTYNNLI 299


>gi|449477018|ref|XP_004154904.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g19290-like [Cucumis sativus]
          Length = 567

 Score =  149 bits (375), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 127/477 (26%), Positives = 216/477 (45%), Gaps = 45/477 (9%)

Query: 293 STGNVVESVSRILRQWKWGPLAEEALGNTNYSMDAYQANQVLKQLQ-DHTVALGFFNWLR 351
           S  ++V+ +SR+L   ++  LA  +   +N  MD      VL+ L+ +   +L FF    
Sbjct: 69  SQPDLVDRISRLLVLRRFDALANLSFSFSNELMDL-----VLRNLRLNPDASLEFFKLAS 123

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVV--------------- 396
           +Q  F+ D  +Y  +V IL RAR +  +   L+++V   C+ N +               
Sbjct: 124 KQPKFRPDVSSYCKIVHILSRARMYKEVRVYLNELVV-LCKNNYIASAVWDELVSVYREF 182

Query: 397 -----TYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMD 451
                 ++ ++  Y        AL VF  M   G  P   +  +L+    + G    A+ 
Sbjct: 183 SFSPTVFDMILKVYAEKGMTKFALCVFDNMGKCGRVPSLRSCNSLLSNLVQNGEAFKALL 242

Query: 452 MYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQA 511
           +Y++M A G+ PD F+Y++++N   K G +  A     EM    C PN+VTYN +I    
Sbjct: 243 VYEQMIALGILPDIFSYTIMVNAYCKEGRVDEAFNFVKEMERSCCEPNVVTYNSLIDGYV 302

Query: 512 KARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHC--GYLDEAEAVFAEMRRKNWVPD 569
              +   A K+   M   G   +  TY+++++  G+C  G +++AE +F  M  KN   D
Sbjct: 303 SLGDVCGAKKVLALMSEKGIPENSRTYTLLIK--GYCKRGQMEQAEKLFGCMMEKNLFVD 360

Query: 570 EPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQ 629
           E VYG+L+  +  AG V  A    +AML+ GL+ N   CNSL++ + ++G ++ A  +L 
Sbjct: 361 EHVYGVLIHAYCTAGRVDDALRIRDAMLKVGLKMNTVICNSLINGYCKLGHVNKAAEVLV 420

Query: 630 GMLNLGLKPSLQTY-TLLLSCCTEARSPYDMGFCHELMAVSGHPAHMFLLSMPSPGPDGQ 688
            M +  LKP    Y TLL   C +         C E+     +       ++ +     +
Sbjct: 421 SMKDWNLKPDSYGYNTLLDGFCKQEDFIKAFKLCDEMHNKGVN------FTVVTYNTLLK 474

Query: 689 NVRDHVGSFLEMMHSEDRESKRGLVD------AVVDFLHKSGLKEEAGSVWEVAAQK 739
           N+  HVG     +H  +   KRG+         ++D   K G  + A  +W+ A  K
Sbjct: 475 NLF-HVGHVEHALHIWNLMHKRGVAPNEVTYCTLLDAFFKVGTFDRAMMIWKDALSK 530



 Score = 97.1 bits (240), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 77/315 (24%), Positives = 129/315 (40%), Gaps = 35/315 (11%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           G   D  +YT MV    +  +       + +M R  C+PNVVTYN LI  Y     +  A
Sbjct: 251 GILPDIFSYTIMVNAYCKEGRVDEAFNFVKEMERSCCEPNVVTYNSLIDGYVSLGDVCGA 310

Query: 415 LDVFKQM-----------------------------QVVGCE------PDRVTYCTLIDI 439
             V   M                             ++ GC        D   Y  LI  
Sbjct: 311 KKVLALMSEKGIPENSRTYTLLIKGYCKRGQMEQAEKLFGCMMEKNLFVDEHVYGVLIHA 370

Query: 440 HAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPN 499
           +  AG +D A+ +   M   GL  +T   + +IN   K GH+  A ++   M +    P+
Sbjct: 371 YCTAGRVDDALRIRDAMLKVGLKMNTVICNSLINGYCKLGHVNKAAEVLVSMKDWNLKPD 430

Query: 500 LVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFA 559
              YN ++    K  ++  A KL  +M N G     VTY+ +++ L H G+++ A  ++ 
Sbjct: 431 SYGYNTLLDGFCKQEDFIKAFKLCDEMHNKGVNFTVVTYNTLLKNLFHVGHVEHALHIWN 490

Query: 560 EMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVG 619
            M ++   P+E  Y  L+D + K G   +A   ++  L  G   ++   N+++  F ++ 
Sbjct: 491 LMHKRGVAPNEVTYCTLLDAFFKVGTFDRAMMIWKDALSKGFTKSITLYNTMICGFCKME 550

Query: 620 QLSDAYHLLQGMLNL 634
           +L  A  +   M  L
Sbjct: 551 KLVQAQEIFLKMKEL 565



 Score = 81.6 bits (200), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 59/247 (23%), Positives = 112/247 (45%)

Query: 350 LRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRAN 409
           L  + G   +  TYT ++    +  Q     KL   M+      +   Y  LIH+Y  A 
Sbjct: 316 LMSEKGIPENSRTYTLLIKGYCKRGQMEQAEKLFGCMMEKNLFVDEHVYGVLIHAYCTAG 375

Query: 410 YLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYS 469
            +++AL +   M  VG + + V   +LI+ + K G ++ A ++   M+   L PD++ Y+
Sbjct: 376 RVDDALRIRDAMLKVGLKMNTVICNSLINGYCKLGHVNKAAEVLVSMKDWNLKPDSYGYN 435

Query: 470 VIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNA 529
            +++   K      A +L  EM N+G    +VTYN ++       + + AL ++  M   
Sbjct: 436 TLLDGFCKQEDFIKAFKLCDEMHNKGVNFTVVTYNTLLKNLFHVGHVEHALHIWNLMHKR 495

Query: 530 GFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKA 589
           G  P++VTY  +++     G  D A  ++ +   K +     +Y  ++  + K   + +A
Sbjct: 496 GVAPNEVTYCTLLDAFFKVGTFDRAMMIWKDALSKGFTKSITLYNTMICGFCKMEKLVQA 555

Query: 590 WEWYEAM 596
            E +  M
Sbjct: 556 QEIFLKM 562


>gi|357457245|ref|XP_003598903.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355487951|gb|AES69154.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 767

 Score =  149 bits (375), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 106/443 (23%), Positives = 196/443 (44%), Gaps = 16/443 (3%)

Query: 310 WGPLAEEALGNTNYSMDAYQANQVLKQLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGI 369
           WGP     L           A +VLK   + T+A  FF+W+ +Q G+ H+  +Y      
Sbjct: 105 WGPPVVTELNKLRRVTPTLVA-EVLKVQTNPTLAFKFFHWVEKQKGYHHNFASYNAFTYC 163

Query: 370 LGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQ-VVGCEP 428
           L RA  F A ++L + M   G  P+   +  LI  +  A        V+ +M+   G +P
Sbjct: 164 LNRANHFRAADQLPELMDAQGKPPSEKQFEILIRMHSDAGRGLRVYHVYDKMRNKFGVKP 223

Query: 429 DRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLF 488
               Y  ++D   K G LD+A+ +Y   +  GL  ++ T+ ++I  L K G +    ++ 
Sbjct: 224 RVFLYNRIMDALVKTGHLDLALSVYNDFREDGLVEESVTFMILIKGLCKGGKIDEMLEVL 283

Query: 489 CEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHC 548
             M  + C P++  Y  ++ +  K  N    L+++++M+    +PD + Y  ++  L   
Sbjct: 284 GRMREKLCKPDVFAYTALVRIMVKEGNLDGCLRVWKEMKRDRVDPDVMAYGTIIGGLAKG 343

Query: 549 GYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTC 608
           G + E   +F EM+ K  + D  +YG LV+ +     V  A++  + ++ +G R ++   
Sbjct: 344 GRVSEGYELFKEMKSKGHLIDRAIYGSLVESFVAGNKVGLAFDLLKDLVSSGYRADLGMY 403

Query: 609 NSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGFCHELMAV 668
           N+L+     + ++  AY L Q  +  GL+P   +   LL    EA+   +     E M  
Sbjct: 404 NNLIEGLCNLNKVEKAYKLFQVTIQEGLEPDFLSVKPLLLAYAEAKRMEEFFMLLEKMKK 463

Query: 669 SGHP-----AHMFLLSMPSPGPD-GQNVRDHVGSFLEMMHSEDRESKRGLVDAVVDFLHK 722
            G P     +  F   +   GP+    +  H+         E       + +  ++ LH 
Sbjct: 464 LGFPVIDDLSKFFSHLVEKKGPEMALEIFTHL--------KEKSYVSVEIYNIFMESLHL 515

Query: 723 SGLKEEAGSVWEVAAQKNVYPDA 745
           SG  E+A S+++     ++ PD+
Sbjct: 516 SGKVEKALSLFDEIKGSDLEPDS 538



 Score = 95.9 bits (237), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 86/406 (21%), Positives = 178/406 (43%), Gaps = 25/406 (6%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           R+   K D   YT +V I+ +        ++  +M RD   P+V+ Y  +I    +   +
Sbjct: 287 REKLCKPDVFAYTALVRIMVKEGNLDGCLRVWKEMKRDRVDPDVMAYGTIIGGLAKGGRV 346

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
           +E  ++FK+M+  G   DR  Y +L++       + +A D+ K + ++G   D   Y+ +
Sbjct: 347 SEGYELFKEMKSKGHLIDRAIYGSLVESFVAGNKVGLAFDLLKDLVSSGYRADLGMYNNL 406

Query: 472 INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF 531
           I  L     ++ A++LF   + +G  P+ ++   ++   A+A+  +    L   M+  GF
Sbjct: 407 IEGLCNLNKVEKAYKLFQVTIQEGLEPDFLSVKPLLLAYAEAKRMEEFFMLLEKMKKLGF 466

Query: 532 EP-DKVT--YSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRK 588
              D ++  +S ++E  G     + A  +F  ++ K++V  E +Y + ++    +G V K
Sbjct: 467 PVIDDLSKFFSHLVEKKGP----EMALEIFTHLKEKSYVSVE-IYNIFMESLHLSGKVEK 521

Query: 589 AWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
           A   ++ +  + L P+  T N  +   +  GQ+ +A      ++ +   PS+  Y  L  
Sbjct: 522 ALSLFDEIKGSDLEPDSSTYNIAILCLVDHGQIKEACECHNKIIEMSSIPSVAAYNCL-- 579

Query: 649 CCTEARSPYDMGFCHELMAV---------SGHPAHMFLLSMPSPGPDGQNVRDHVGSFLE 699
               A+   ++G   E M +         SG     + L++        NV + +   L 
Sbjct: 580 ----AKGLCNIGEIDEAMLLVRDCLGNVTSGPMEFKYCLTIIRMCK--SNVAEKLIDVLN 633

Query: 700 MMHSEDRESKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDA 745
            M  E       +  A++  + K G  EEA  V+ +  ++ +  ++
Sbjct: 634 EMMQEGCSLDNVVCSAIISGMCKYGTIEEARKVFSILRERKLLTES 679


>gi|255549482|ref|XP_002515794.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223545122|gb|EEF46633.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 924

 Score =  149 bits (375), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 84/317 (26%), Positives = 163/317 (51%)

Query: 354 AGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNE 413
           AG KH+  TY+ ++    + + +     + + +V+DG +P+VV YN +I ++     ++ 
Sbjct: 510 AGIKHNMKTYSMLINGFLKLKDWANAFAIFEDVVKDGLKPDVVLYNNIIRAFCGMGTMDR 569

Query: 414 ALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIIN 473
           A+ + K+MQ     P   T+  +I   A+AG +  A+D++  M+ +G  P   T++ +I 
Sbjct: 570 AICMVKEMQKERHRPTSRTFMPIIHGFARAGEMKRALDVFDMMRRSGCIPTVHTFNALIL 629

Query: 474 CLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEP 533
            L +   ++ A ++  EM   G  PN  TY  ++   A   +   A + +  +++ G + 
Sbjct: 630 GLVEKRQMEKAIEILDEMALAGVSPNEHTYTTIMHGYAALGDTGKAFEYFTKLRDEGLQL 689

Query: 534 DKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWY 593
           D  TY  +++     G +  A AV  EM  +N   +  VY +L+D W + G+V +A +  
Sbjct: 690 DVYTYEALLKACCKSGRMQSALAVTKEMSAQNIPRNTFVYNILIDGWARRGDVWEAADLM 749

Query: 594 EAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEA 653
           + M Q G++P++ T  S ++A  + G +  A  +++ M   G+KP+++TYT L+     A
Sbjct: 750 QQMKQGGVKPDIHTYTSFINACCKAGDMLRASKMMEEMETSGVKPNVKTYTTLIHGWARA 809

Query: 654 RSPYDMGFCHELMAVSG 670
             P     C + M ++G
Sbjct: 810 SLPEKALRCFQEMKLAG 826



 Score =  123 bits (308), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 72/264 (27%), Positives = 123/264 (46%)

Query: 362 TYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQM 421
           T+  ++    RA +      + D M R GC P V T+N LI        + +A+++  +M
Sbjct: 588 TFMPIIHGFARAGEMKRALDVFDMMRRSGCIPTVHTFNALILGLVEKRQMEKAIEILDEM 647

Query: 422 QVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHL 481
            + G  P+  TY T++  +A  G    A + + K++  GL  D +TY  ++    K+G +
Sbjct: 648 ALAGVSPNEHTYTTIMHGYAALGDTGKAFEYFTKLRDEGLQLDVYTYEALLKACCKSGRM 707

Query: 482 QAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIV 541
           Q+A  +  EM  Q    N   YNI+I   A+  +   A  L + M+  G +PD  TY+  
Sbjct: 708 QSALAVTKEMSAQNIPRNTFVYNILIDGWARRGDVWEAADLMQQMKQGGVKPDIHTYTSF 767

Query: 542 MEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGL 601
           +      G +  A  +  EM      P+   Y  L+  W +A    KA   ++ M  AGL
Sbjct: 768 INACCKAGDMLRASKMMEEMETSGVKPNVKTYTTLIHGWARASLPEKALRCFQEMKLAGL 827

Query: 602 RPNVPTCNSLLSAFLRVGQLSDAY 625
           +P+    + L++A L    +++AY
Sbjct: 828 KPDKAVYHCLMTALLSRATVTEAY 851



 Score =  117 bits (293), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 64/296 (21%), Positives = 146/296 (49%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           ++ G +    TY+ +VG   +     A ++   +        N + Y  +I++Y +   +
Sbjct: 368 KEEGVEMSLVTYSIIVGGFAKIGNADAADRWFKEAKDRHSHMNAIIYGNMIYAYCQTCNM 427

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
           ++A  + ++M+  G +     Y T++D +   G  +  + ++++++  G +P   +Y  +
Sbjct: 428 DQAEALVREMEGEGIDAPIDIYHTMMDGYTMVGNEEKCLTVFERLKECGFAPSVVSYGCL 487

Query: 472 INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF 531
           IN   K G +  A ++   M + G   N+ TY+++I    K +++ +A  ++ D+   G 
Sbjct: 488 INLYAKVGKISKALEVSKMMESAGIKHNMKTYSMLINGFLKLKDWANAFAIFEDVVKDGL 547

Query: 532 EPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWE 591
           +PD V Y+ ++      G +D A  +  EM+++   P    +  ++  + +AG +++A +
Sbjct: 548 KPDVVLYNNIIRAFCGMGTMDRAICMVKEMQKERHRPTSRTFMPIIHGFARAGEMKRALD 607

Query: 592 WYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
            ++ M ++G  P V T N+L+   +   Q+  A  +L  M   G+ P+  TYT ++
Sbjct: 608 VFDMMRRSGCIPTVHTFNALILGLVEKRQMEKAIEILDEMALAGVSPNEHTYTTIM 663



 Score =  115 bits (288), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 67/256 (26%), Positives = 124/256 (48%)

Query: 392 QPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMD 451
           +P+   Y  ++  Y R   ++ A   F+ M+  G EP    Y +LI  +A    ++ A+ 
Sbjct: 303 KPSRREYGLMVSYYARRGDMHRARQTFESMRARGIEPTSHVYTSLIHAYAVGRDMEEALS 362

Query: 452 MYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQA 511
             +KM+  G+     TYS+I+    K G+  AA + F E  ++    N + Y  MI    
Sbjct: 363 CARKMKEEGVEMSLVTYSIIVGGFAKIGNADAADRWFKEAKDRHSHMNAIIYGNMIYAYC 422

Query: 512 KARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEP 571
           +  N   A  L R+M+  G +     Y  +M+     G  ++   VF  ++   + P   
Sbjct: 423 QTCNMDQAEALVREMEGEGIDAPIDIYHTMMDGYTMVGNEEKCLTVFERLKECGFAPSVV 482

Query: 572 VYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGM 631
            YG L++L+ K G + KA E  + M  AG++ N+ T + L++ FL++   ++A+ + + +
Sbjct: 483 SYGCLINLYAKVGKISKALEVSKMMESAGIKHNMKTYSMLINGFLKLKDWANAFAIFEDV 542

Query: 632 LNLGLKPSLQTYTLLL 647
           +  GLKP +  Y  ++
Sbjct: 543 VKDGLKPDVVLYNNII 558



 Score =  114 bits (284), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 75/300 (25%), Positives = 139/300 (46%), Gaps = 2/300 (0%)

Query: 382 LLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHA 441
           L+ +M  +G    +  Y+ ++  Y       + L VF++++  G  P  V+Y  LI+++A
Sbjct: 433 LVREMEGEGIDAPIDIYHTMMDGYTMVGNEEKCLTVFERLKECGFAPSVVSYGCLINLYA 492

Query: 442 KAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLV 501
           K G +  A+++ K M++AG+  +  TYS++IN   K      A  +F ++V  G  P++V
Sbjct: 493 KVGKISKALEVSKMMESAGIKHNMKTYSMLINGFLKLKDWANAFAIFEDVVKDGLKPDVV 552

Query: 502 TYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEM 561
            YN +I           A+ + ++MQ     P   T+  ++      G +  A  VF  M
Sbjct: 553 LYNNIIRAFCGMGTMDRAICMVKEMQKERHRPTSRTFMPIIHGFARAGEMKRALDVFDMM 612

Query: 562 RRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQL 621
           RR   +P    +  L+    +   + KA E  + M  AG+ PN  T  +++  +  +G  
Sbjct: 613 RRSGCIPTVHTFNALILGLVEKRQMEKAIEILDEMALAGVSPNEHTYTTIMHGYAALGDT 672

Query: 622 SDAYHLLQGMLNLGLKPSLQTYTLLL-SCCTEARSPYDMGFCHELMAVSGHPAHMFLLSM 680
             A+     + + GL+  + TY  LL +CC   R    +    E M+    P + F+ ++
Sbjct: 673 GKAFEYFTKLRDEGLQLDVYTYEALLKACCKSGRMQSALAVTKE-MSAQNIPRNTFVYNI 731



 Score =  104 bits (260), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 72/277 (25%), Positives = 128/277 (46%), Gaps = 12/277 (4%)

Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLI 402
           AL  F+ +RR +G     HT+  ++  L   RQ     ++LD+M   G  PN  TY  ++
Sbjct: 605 ALDVFDMMRR-SGCIPTVHTFNALILGLVEKRQMEKAIEILDEMALAGVSPNEHTYTTIM 663

Query: 403 HSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLS 462
           H Y       +A + F +++  G + D  TY  L+    K+G +  A+ + K+M A  + 
Sbjct: 664 HGYAALGDTGKAFEYFTKLRDEGLQLDVYTYEALLKACCKSGRMQSALAVTKEMSAQNIP 723

Query: 463 PDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKL 522
            +TF Y+++I+   + G +  A  L  +M   G  P++ TY   I    KA +   A K+
Sbjct: 724 RNTFVYNILIDGWARRGDVWEAADLMQQMKQGGVKPDIHTYTSFINACCKAGDMLRASKM 783

Query: 523 YRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGK 582
             +M+ +G +P+  TY+ ++         ++A   F EM+     PD+ VY  L+     
Sbjct: 784 MEEMETSGVKPNVKTYTTLIHGWARASLPEKALRCFQEMKLAGLKPDKAVYHCLMTALLS 843

Query: 583 AGNVRKAWEWYEAMLQAGLRPNV-PTCNSLLSAFLRV 618
              V +A+          +RP +   C  ++ + L V
Sbjct: 844 RATVTEAY----------VRPGILSICKEMIESGLIV 870



 Score = 92.8 bits (229), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 66/286 (23%), Positives = 127/286 (44%), Gaps = 6/286 (2%)

Query: 362 TYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQM 421
           +Y    G + RARQ        + M   G +P    Y  LIH+Y     + EAL   ++M
Sbjct: 314 SYYARRGDMHRARQ------TFESMRARGIEPTSHVYTSLIHAYAVGRDMEEALSCARKM 367

Query: 422 QVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHL 481
           +  G E   VTY  ++   AK G  D A   +K+ +      +   Y  +I    +  ++
Sbjct: 368 KEEGVEMSLVTYSIIVGGFAKIGNADAADRWFKEAKDRHSHMNAIIYGNMIYAYCQTCNM 427

Query: 482 QAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIV 541
             A  L  EM  +G    +  Y+ M+       N +  L ++  ++  GF P  V+Y  +
Sbjct: 428 DQAEALVREMEGEGIDAPIDIYHTMMDGYTMVGNEEKCLTVFERLKECGFAPSVVSYGCL 487

Query: 542 MEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGL 601
           + +    G + +A  V   M       +   Y +L++ + K  +   A+  +E +++ GL
Sbjct: 488 INLYAKVGKISKALEVSKMMESAGIKHNMKTYSMLINGFLKLKDWANAFAIFEDVVKDGL 547

Query: 602 RPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
           +P+V   N+++ AF  +G +  A  +++ M     +P+ +T+  ++
Sbjct: 548 KPDVVLYNNIIRAFCGMGTMDRAICMVKEMQKERHRPTSRTFMPII 593



 Score = 88.6 bits (218), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 51/222 (22%), Positives = 114/222 (51%)

Query: 427 EPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQ 486
           +P R  Y  ++  +A+ G +  A   ++ M+A G+ P +  Y+ +I+       ++ A  
Sbjct: 303 KPSRREYGLMVSYYARRGDMHRARQTFESMRARGIEPTSHVYTSLIHAYAVGRDMEEALS 362

Query: 487 LFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLG 546
              +M  +G   +LVTY+I++   AK  N  +A + +++ ++     + + Y  ++    
Sbjct: 363 CARKMKEEGVEMSLVTYSIIVGGFAKIGNADAADRWFKEAKDRHSHMNAIIYGNMIYAYC 422

Query: 547 HCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVP 606
               +D+AEA+  EM  +       +Y  ++D +   GN  K    +E + + G  P+V 
Sbjct: 423 QTCNMDQAEALVREMEGEGIDAPIDIYHTMMDGYTMVGNEEKCLTVFERLKECGFAPSVV 482

Query: 607 TCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
           +   L++ + +VG++S A  + + M + G+K +++TY++L++
Sbjct: 483 SYGCLINLYAKVGKISKALEVSKMMESAGIKHNMKTYSMLIN 524


>gi|357503117|ref|XP_003621847.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355496862|gb|AES78065.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 457

 Score =  149 bits (375), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 90/296 (30%), Positives = 155/296 (52%), Gaps = 1/296 (0%)

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
           + G   D  TY T++    R     A   +L++M   G  P+VV+YN L     R   L 
Sbjct: 35  KLGLNPDIITYNTLIDGYCRFVGIDAAYNILNRMKEAGINPDVVSYNSLSSGAVRKCLLQ 94

Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAG-LSPDTFTYSVI 471
           ++LD+F +M   G  PD  +Y  L+  + + G  + A  +++ +   G + P   +Y+V+
Sbjct: 95  KSLDLFDEMLQSGIRPDVWSYNILMHCYFRLGKPEEANGVFRDIFERGEIYPSMASYNVM 154

Query: 472 INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF 531
           IN L K G++  A  LF  +  +G +P ++TYN MI    KAR    A ++  +  + GF
Sbjct: 155 INGLCKNGYVNNALMLFRNLRRRGFVPEVLTYNAMINGLCKARRLADARRVLNEFCDFGF 214

Query: 532 EPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWE 591
           EP+ +TY+ VM+    CG L++   + +EMRRK +  D   Y  +V    K G + +A E
Sbjct: 215 EPNAITYTTVMKCCFRCGRLEQGLEILSEMRRKGFTFDGFAYCTVVAALVKTGRIEEADE 274

Query: 592 WYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
             E M+  GL P++ + N++++ F R G+  +A  L+  +   G+K    T+T+++
Sbjct: 275 IAEKMMSNGLVPDLASYNTMINLFCRQGRFDEALRLVDEIEKQGMKCDQYTHTIII 330



 Score =  115 bits (288), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 79/310 (25%), Positives = 145/310 (46%), Gaps = 3/310 (0%)

Query: 347 FNWLRR--QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHS 404
           +N L R  +AG   D  +Y ++     R         L D+M++ G +P+V +YN L+H 
Sbjct: 62  YNILNRMKEAGINPDVVSYNSLSSGAVRKCLLQKSLDLFDEMLQSGIRPDVWSYNILMHC 121

Query: 405 YGRANYLNEALDVFKQMQVVG-CEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSP 463
           Y R     EA  VF+ +   G   P   +Y  +I+   K G+++ A+ +++ ++  G  P
Sbjct: 122 YFRLGKPEEANGVFRDIFERGEIYPSMASYNVMINGLCKNGYVNNALMLFRNLRRRGFVP 181

Query: 464 DTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLY 523
           +  TY+ +IN L KA  L  A ++  E  + G  PN +TY  ++    +    +  L++ 
Sbjct: 182 EVLTYNAMINGLCKARRLADARRVLNEFCDFGFEPNAITYTTVMKCCFRCGRLEQGLEIL 241

Query: 524 RDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKA 583
            +M+  GF  D   Y  V+  L   G ++EA+ +  +M     VPD   Y  +++L+ + 
Sbjct: 242 SEMRRKGFTFDGFAYCTVVAALVKTGRIEEADEIAEKMMSNGLVPDLASYNTMINLFCRQ 301

Query: 584 GNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTY 643
           G   +A    + + + G++ +  T   ++    + G    A   L  M  LG   +L  +
Sbjct: 302 GRFDEALRLVDEIEKQGMKCDQYTHTIIIHGLCKDGNFEGAEKHLDYMNTLGFGFNLVAF 361

Query: 644 TLLLSCCTEA 653
             +L C  +A
Sbjct: 362 NSILDCLGKA 371



 Score =  108 bits (271), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 78/282 (27%), Positives = 134/282 (47%), Gaps = 5/282 (1%)

Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLI 402
           AL  F  LRR+ GF  +  TY  M+  L +AR+     ++L++    G +PN +TY  ++
Sbjct: 167 ALMLFRNLRRR-GFVPEVLTYNAMINGLCKARRLADARRVLNEFCDFGFEPNAITYTTVM 225

Query: 403 HSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLS 462
               R   L + L++  +M+  G   D   YCT++    K G ++ A ++ +KM + GL 
Sbjct: 226 KCCFRCGRLEQGLEILSEMRRKGFTFDGFAYCTVVAALVKTGRIEEADEIAEKMMSNGLV 285

Query: 463 PDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKL 522
           PD  +Y+ +IN   + G    A +L  E+  QG   +  T+ I+I    K  N++ A K 
Sbjct: 286 PDLASYNTMINLFCRQGRFDEALRLVDEIEKQGMKCDQYTHTIIIHGLCKDGNFEGAEKH 345

Query: 523 YRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGK 582
              M   GF  + V ++ +++ LG  G +D+A  VF  M     V D   Y  L+    +
Sbjct: 346 LDYMNTLGFGFNLVAFNSILDCLGKAGDIDKAVKVFDSME----VKDSFTYTSLLHNLCR 401

Query: 583 AGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDA 624
           A   R A +   A ++ G +    T  +++      G + +A
Sbjct: 402 AKKFRIASKLLVASIEDGFQILRATQRAVIDGLTTSGLVYEA 443



 Score = 78.2 bits (191), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 54/216 (25%), Positives = 105/216 (48%), Gaps = 4/216 (1%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           R+ GF  D   Y T+V  L +  +    +++ ++M+ +G  P++ +YN +I+ + R    
Sbjct: 245 RRKGFTFDGFAYCTVVAALVKTGRIEEADEIAEKMMSNGLVPDLASYNTMINLFCRQGRF 304

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
           +EAL +  +++  G + D+ T+  +I    K G  + A      M   G   +   ++ I
Sbjct: 305 DEALRLVDEIEKQGMKCDQYTHTIIIHGLCKDGNFEGAEKHLDYMNTLGFGFNLVAFNSI 364

Query: 472 INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF 531
           ++CLGKAG +  A ++F  M     + +  TY  ++    +A+ ++ A KL       GF
Sbjct: 365 LDCLGKAGDIDKAVKVFDSME----VKDSFTYTSLLHNLCRAKKFRIASKLLVASIEDGF 420

Query: 532 EPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWV 567
           +  + T   V++ L   G + EA  V  +++R   V
Sbjct: 421 QILRATQRAVIDGLTTSGLVYEARKVKLKIQRARLV 456



 Score = 50.8 bits (120), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 28/97 (28%), Positives = 48/97 (49%)

Query: 553 EAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLL 612
           +AE V  +  +    PD   Y  L+D + +   +  A+     M +AG+ P+V + NSL 
Sbjct: 25  KAETVLIDGIKLGLNPDIITYNTLIDGYCRFVGIDAAYNILNRMKEAGINPDVVSYNSLS 84

Query: 613 SAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSC 649
           S  +R   L  +  L   ML  G++P + +Y +L+ C
Sbjct: 85  SGAVRKCLLQKSLDLFDEMLQSGIRPDVWSYNILMHC 121


>gi|215794293|gb|ACJ70132.1| restorer-of-fertility [Brassica napus]
          Length = 667

 Score =  149 bits (375), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 104/354 (29%), Positives = 172/354 (48%), Gaps = 56/354 (15%)

Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLI 402
           AL FF+ +      K +   +TT++  L R  +      LLD+MV DG QPN +TY  ++
Sbjct: 165 ALHFFHQI-----CKPNVIAFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIV 219

Query: 403 HSYGRANYLNEALDVFKQMQVVG-CEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGL 461
               +      AL++ ++M+ V   +P+ V Y  +ID   K G    A +++ +MQ  G+
Sbjct: 220 DGMCKMGDTVSALNLLRKMEEVSRIKPNVVIYSAIIDGLWKDGRQTDAQNLFSEMQEKGI 279

Query: 462 SPDTFTY-----------------------------------SVIINCLGKAGHLQAAHQ 486
           SP+ FTY                                   SV+IN L K G    A +
Sbjct: 280 SPNLFTYNCMINGFCSSGRWSEAQRLLREMFERKMSPDVVTFSVLINALVKEGKFFEAEE 339

Query: 487 LFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLG 546
           L+ EM+ +G IPN +TYN MI   +K     +A +++  M   G  PD +T+SI+++  G
Sbjct: 340 LYNEMLPRGIIPNTITYNSMIDGFSKQNRLDAAERMFYLMATKGCSPDVITFSILID--G 397

Query: 547 HCG--YLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPN 604
           +CG   +D+   +  EM R+  V +   Y  L+  + + GN+  A +  + M+ +G+ PN
Sbjct: 398 YCGAKRVDDGMKLLHEMSRRGLVANTITYTTLIHGFCQLGNLNAALDLLQEMISSGVCPN 457

Query: 605 VPTCNSLLSAFLRVGQLSDAYHLLQGM----LNL-------GLKPSLQTYTLLL 647
           V TCN+LL      G+L DA  + + M    ++L        ++P +QTY +L+
Sbjct: 458 VVTCNTLLDGLCNNGKLKDALEMFKVMQKSKMDLDASHPFNDVEPDVQTYNILI 511



 Score =  142 bits (357), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 92/336 (27%), Positives = 152/336 (45%), Gaps = 46/336 (13%)

Query: 359 DEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVF 418
           D  T++ ++  L +  +F    +L ++M+  G  PN +TYN +I  + + N L+ A  +F
Sbjct: 317 DVVTFSVLINALVKEGKFFEAEELYNEMLPRGIIPNTITYNSMIDGFSKQNRLDAAERMF 376

Query: 419 KQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKA 478
             M   GC PD +T+  LID +  A  +D  M +  +M   GL  +T TY+ +I+   + 
Sbjct: 377 YLMATKGCSPDVITFSILIDGYCGAKRVDDGMKLLHEMSRRGLVANTITYTTLIHGFCQL 436

Query: 479 GHLQAAHQLFCEMVNQGCIPNLVT------------------------------------ 502
           G+L AA  L  EM++ G  PN+VT                                    
Sbjct: 437 GNLNAALDLLQEMISSGVCPNVVTCNTLLDGLCNNGKLKDALEMFKVMQKSKMDLDASHP 496

Query: 503 ----------YNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLD 552
                     YNI+I        +  A +LY +M + G  PD +TY+ V++ L     LD
Sbjct: 497 FNDVEPDVQTYNILICGLINEGKFSEAEELYEEMPHRGLVPDTITYNSVIDGLCKQSRLD 556

Query: 553 EAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLL 612
           EA  +F  M  K + PD   +  L++ + K G V    E +  M + G+  N  T  +L+
Sbjct: 557 EATQMFDSMGSKGFSPDVVTFTTLINGYCKVGRVGDGLEVFCEMGRRGIVANAITYRTLI 616

Query: 613 SAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
             F +VG ++ A  + Q M++ G+ P   T   +L+
Sbjct: 617 HGFCQVGNINGALDIFQEMISSGVYPDTITIRNMLT 652



 Score =  134 bits (336), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 85/293 (29%), Positives = 145/293 (49%), Gaps = 15/293 (5%)

Query: 349 WLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRA 408
           +L    G   D  T++ ++     A++     KLL +M R G   N +TY  LIH + + 
Sbjct: 377 YLMATKGCSPDVITFSILIDGYCGAKRVDDGMKLLHEMSRRGLVANTITYTTLIHGFCQL 436

Query: 409 NYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGL------- 461
             LN ALD+ ++M   G  P+ VT  TL+D     G L  A++M+K MQ + +       
Sbjct: 437 GNLNAALDLLQEMISSGVCPNVVTCNTLLDGLCNNGKLKDALEMFKVMQKSKMDLDASHP 496

Query: 462 ----SPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQ 517
                PD  TY+++I  L   G    A +L+ EM ++G +P+ +TYN +I    K     
Sbjct: 497 FNDVEPDVQTYNILICGLINEGKFSEAEELYEEMPHRGLVPDTITYNSVIDGLCKQSRLD 556

Query: 518 SALKLYRDMQNAGFEPDKVTYSIVMEVLGHC--GYLDEAEAVFAEMRRKNWVPDEPVYGL 575
            A +++  M + GF PD VT++ ++   G+C  G + +   VF EM R+  V +   Y  
Sbjct: 557 EATQMFDSMGSKGFSPDVVTFTTLIN--GYCKVGRVGDGLEVFCEMGRRGIVANAITYRT 614

Query: 576 LVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLL 628
           L+  + + GN+  A + ++ M+ +G+ P+  T  ++L+      +L  A   L
Sbjct: 615 LIHGFCQVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRAVQCL 667



 Score =  131 bits (329), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 108/453 (23%), Positives = 197/453 (43%), Gaps = 35/453 (7%)

Query: 326 DAYQANQV--------LKQLQDHTVALGFFNWLRRQAGFKHDEHTYTTMV-GILGRARQF 376
           D  Q NQ+        + ++ D   AL     +   +  K +   Y+ ++ G+    RQ 
Sbjct: 206 DGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEEVSRIKPNVVIYSAIIDGLWKDGRQT 265

Query: 377 GAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTL 436
            A N L  +M   G  PN+ TYN +I+ +  +   +EA  + ++M      PD VT+  L
Sbjct: 266 DAQN-LFSEMQEKGISPNLFTYNCMINGFCSSGRWSEAQRLLREMFERKMSPDVVTFSVL 324

Query: 437 IDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGC 496
           I+   K G    A ++Y +M   G+ P+T TY+ +I+   K   L AA ++F  M  +GC
Sbjct: 325 INALVKEGKFFEAEELYNEMLPRGIIPNTITYNSMIDGFSKQNRLDAAERMFYLMATKGC 384

Query: 497 IPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEA 556
            P+++T++I+I     A+     +KL  +M   G   + +TY+ ++      G L+ A  
Sbjct: 385 SPDVITFSILIDGYCGAKRVDDGMKLLHEMSRRGLVANTITYTTLIHGFCQLGNLNAALD 444

Query: 557 VFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGL-----------RPNV 605
           +  EM      P+      L+D     G ++ A E ++ M ++ +            P+V
Sbjct: 445 LLQEMISSGVCPNVVTCNTLLDGLCNNGKLKDALEMFKVMQKSKMDLDASHPFNDVEPDV 504

Query: 606 PTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTY-TLLLSCCTEARSPYDMGFCHE 664
            T N L+   +  G+ S+A  L + M + GL P   TY +++   C ++R          
Sbjct: 505 QTYNILICGLINEGKFSEAEELYEEMPHRGLVPDTITYNSVIDGLCKQSRLDEATQMFDS 564

Query: 665 LMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRESKRGLVDAVVDF---LH 721
           + +    P  +   ++ +       V D +  F EM        +RG+V   + +   +H
Sbjct: 565 MGSKGFSPDVVTFTTLINGYCKVGRVGDGLEVFCEM-------GRRGIVANAITYRTLIH 617

Query: 722 ---KSGLKEEAGSVWEVAAQKNVYPDAVKEKGM 751
              + G    A  +++      VYPD +  + M
Sbjct: 618 GFCQVGNINGALDIFQEMISSGVYPDTITIRNM 650



 Score = 97.4 bits (241), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 81/336 (24%), Positives = 140/336 (41%), Gaps = 33/336 (9%)

Query: 363 YTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQ 422
           +  ++G++ R  +   +  L  +M       N+ ++  LI  +   + L  AL  F ++ 
Sbjct: 79  FCKLLGVVVRMERPDVVISLHRKMEMRRIPCNIYSFTILIKCFCSCSKLPFALSTFGKIT 138

Query: 423 VVGCEPDRVTYCTLID-----------IH--------------------AKAGFLDVAMD 451
            +G  P  VT+ TL+            +H                     + G +  A+ 
Sbjct: 139 KLGFHPSLVTFSTLLHGLCVEDRVSEALHFFHQICKPNVIAFTTLMNGLCREGRVVEAVA 198

Query: 452 MYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCI-PNLVTYNIMIALQ 510
           +  +M   GL P+  TY  I++ + K G   +A  L  +M     I PN+V Y+ +I   
Sbjct: 199 LLDRMVEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEEVSRIKPNVVIYSAIIDGL 258

Query: 511 AKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDE 570
            K      A  L+ +MQ  G  P+  TY+ ++      G   EA+ +  EM  +   PD 
Sbjct: 259 WKDGRQTDAQNLFSEMQEKGISPNLFTYNCMINGFCSSGRWSEAQRLLREMFERKMSPDV 318

Query: 571 PVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQG 630
             + +L++   K G   +A E Y  ML  G+ PN  T NS++  F +  +L  A  +   
Sbjct: 319 VTFSVLINALVKEGKFFEAEELYNEMLPRGIIPNTITYNSMIDGFSKQNRLDAAERMFYL 378

Query: 631 MLNLGLKPSLQTYTLLLS-CCTEARSPYDMGFCHEL 665
           M   G  P + T+++L+   C   R    M   HE+
Sbjct: 379 MATKGCSPDVITFSILIDGYCGAKRVDDGMKLLHEM 414



 Score = 84.7 bits (208), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 71/344 (20%), Positives = 146/344 (42%), Gaps = 19/344 (5%)

Query: 411 LNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSV 470
           L++A+D+F  M      P  + +C L+ +  +    DV + +++KM+   +  + +++++
Sbjct: 57  LDDAIDLFGYMVRSRPLPCVIDFCKLLGVVVRMERPDVVISLHRKMEMRRIPCNIYSFTI 116

Query: 471 IINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAG 530
           +I C      L  A   F ++   G  P+LVT++ ++           AL  +  +    
Sbjct: 117 LIKCFCSCSKLPFALSTFGKITKLGFHPSLVTFSTLLHGLCVEDRVSEALHFFHQI---- 172

Query: 531 FEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAW 590
            +P+ + ++ +M  L   G + EA A+   M      P++  YG +VD   K G+   A 
Sbjct: 173 CKPNVIAFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKMGDTVSAL 232

Query: 591 EWYEAMLQAG-LRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS- 648
                M +   ++PNV   ++++    + G+ +DA +L   M   G+ P+L TY  +++ 
Sbjct: 233 NLLRKMEEVSRIKPNVVIYSAIIDGLWKDGRQTDAQNLFSEMQEKGISPNLFTYNCMING 292

Query: 649 CCTEARSPYDMGFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRES 708
            C+  R         E+      P  +    +        N     G F E     +   
Sbjct: 293 FCSSGRWSEAQRLLREMFERKMSPDVVTFSVLI-------NALVKEGKFFEAEELYNEML 345

Query: 709 KRGLV------DAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAV 746
            RG++      ++++D   K    + A  ++ + A K   PD +
Sbjct: 346 PRGIIPNTITYNSMIDGFSKQNRLDAAERMFYLMATKGCSPDVI 389


>gi|125527955|gb|EAY76069.1| hypothetical protein OsI_03997 [Oryza sativa Indica Group]
          Length = 684

 Score =  149 bits (375), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 124/498 (24%), Positives = 204/498 (40%), Gaps = 92/498 (18%)

Query: 359 DEHTYTTMV-GILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDV 417
           D +TYT ++ G+  R R  G    LLD M+  GCQP+VVTY  L+ +  ++    +A++V
Sbjct: 144 DAYTYTPIIRGLCDRGR-VGEALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEV 202

Query: 418 FKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGK 477
             +M+  GC P+ VTY  +I+   + G +D A +   ++ + G  PDT +Y+ ++  L  
Sbjct: 203 LDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCA 262

Query: 478 AGHLQAAHQLFCEMVNQGCIPNLVTY---------------------------------- 503
           A   +   +LF EM+ + C+PN VT+                                  
Sbjct: 263 AKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTL 322

Query: 504 -NIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMR 562
            NI+I    K      A +   +M + G  PD ++Y+ V++ L      ++A+ +  EM 
Sbjct: 323 CNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMV 382

Query: 563 RKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLS 622
           RKN  P+E  +   + +  + G + +A    E M + G   N+ T N+L++ F   G++ 
Sbjct: 383 RKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVD 442

Query: 623 DAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGFCHELMAVSGHPAHMFLLSMPS 682
            A  L   M     KP+  TYT LL+           G C+                   
Sbjct: 443 SALELFYSM---PCKPNTITYTTLLT-----------GLCN------------------- 469

Query: 683 PGPDGQNVRDHVGSFLEMMHSEDRESKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVY 742
                    D     L  M  +D        + +V F  + GL +EA  + E        
Sbjct: 470 -----AERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVE-------- 516

Query: 743 PDAVKEKGMSYWLINLHVMSDGTAVIALSRTLAWFRKQMLISGVGPSRIDIVTGWGRRSR 802
              + E G +  LI  + + DG      S         ++ +GV P   DIVT     S 
Sbjct: 517 --QMMEHGCTPNLITYNTLLDGITNDCNSEEALELLHGLVSNGVSP---DIVT----YSS 567

Query: 803 VTGTSLVRQAVQELLHMF 820
           + G       V+E + MF
Sbjct: 568 IIGVLSREDRVEEAIKMF 585



 Score =  144 bits (364), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 91/334 (27%), Positives = 155/334 (46%), Gaps = 33/334 (9%)

Query: 346 FFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSY 405
           F N L    GF+ D  +YTT++  L  A+++  + +L  +M+   C PN VT++ L+  +
Sbjct: 237 FLNRLS-SYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFF 295

Query: 406 GRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDT 465
            R   +  A+ V +QM   GC  +      +I+   K G +D A      M + G SPDT
Sbjct: 296 CRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDT 355

Query: 466 FTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRD 525
            +Y+ ++  L +A   + A +L  EMV + C PN VT+N  I +  +    + A  L   
Sbjct: 356 ISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQ 415

Query: 526 MQNAGFE--------------------------------PDKVTYSIVMEVLGHCGYLDE 553
           M   G E                                P+ +TY+ ++  L +   LD 
Sbjct: 416 MSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSMPCKPNTITYTTLLTGLCNAERLDA 475

Query: 554 AEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLS 613
           A  + AEM +K+  P+   + +LV  + + G + +A E  E M++ G  PN+ T N+LL 
Sbjct: 476 AAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNTLLD 535

Query: 614 AFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
                    +A  LL G+++ G+ P + TY+ ++
Sbjct: 536 GITNDCNSEEALELLHGLVSNGVSPDIVTYSSII 569



 Score =  135 bits (340), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 83/293 (28%), Positives = 138/293 (47%), Gaps = 3/293 (1%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           G   D +  T ++  L R  +     ++L    R G   +V  YN L+  Y R   L+ A
Sbjct: 73  GEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAVDVFAYNTLVAGYCRYGQLDAA 132

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
             +   M V    PD  TY  +I      G +  A+ +   M   G  P   TY+V++  
Sbjct: 133 RRLIASMPVA---PDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQPSVVTYTVLLEA 189

Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPD 534
           + K+     A ++  EM  +GC PN+VTYN++I    +      A +    + + GF+PD
Sbjct: 190 VCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPD 249

Query: 535 KVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYE 594
            V+Y+ V++ L      ++ E +FAEM  KN +P+E  + +LV  + + G V +A +  E
Sbjct: 250 TVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLE 309

Query: 595 AMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
            M   G   N   CN +++   + G++ DA+  L  M + G  P   +YT +L
Sbjct: 310 QMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVL 362



 Score =  132 bits (331), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 94/360 (26%), Positives = 165/360 (45%), Gaps = 15/360 (4%)

Query: 290 HFASTGNVVESVSRILRQWKWGPLAEEALGNTNYSMDAYQANQVLKQ--LQDHTVALGFF 347
            F   G +VE   ++L Q      A       N ++     N + KQ  + D   A  F 
Sbjct: 293 RFFCRGGMVERAIQVLEQMSGHGCA------ANTTLCNIVINTICKQGRVDD---AFQFL 343

Query: 348 NWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGR 407
           N +    G   D  +YTT++  L RA ++    +LL +MVR  C PN VT+N  I    +
Sbjct: 344 NNMG-SYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQ 402

Query: 408 ANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFT 467
              + +A  + +QM   GCE + VTY  L++     G +D A++++  M      P+T T
Sbjct: 403 KGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSMPC---KPNTIT 459

Query: 468 YSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQ 527
           Y+ ++  L  A  L AA +L  EM+ + C PN+VT+N++++   +      A++L   M 
Sbjct: 460 YTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMM 519

Query: 528 NAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVR 587
             G  P+ +TY+ +++ + +    +EA  +   +      PD   Y  ++ +  +   V 
Sbjct: 520 EHGCTPNLITYNTLLDGITNDCNSEEALELLHGLVSNGVSPDIVTYSSIIGVLSREDRVE 579

Query: 588 KAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
           +A + +  +   G+RP     N +L A  +      A      M++ G  P+  TY  L+
Sbjct: 580 EAIKMFHIVQDLGMRPKAVIYNKILLALCKRCNTDGAIDFFAYMVSNGCMPNELTYITLI 639



 Score =  126 bits (316), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 77/278 (27%), Positives = 139/278 (50%), Gaps = 3/278 (1%)

Query: 359 DEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVF 418
           +E T+ T + IL +         L++QM   GC+ N+VTYN L++ +     ++ AL++F
Sbjct: 389 NEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELF 448

Query: 419 KQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKA 478
             M    C+P+ +TY TL+     A  LD A ++  +M     +P+  T++V+++   + 
Sbjct: 449 YSMP---CKPNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQK 505

Query: 479 GHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTY 538
           G +  A +L  +M+  GC PNL+TYN ++       N + AL+L   + + G  PD VTY
Sbjct: 506 GLMDEAIELVEQMMEHGCTPNLITYNTLLDGITNDCNSEEALELLHGLVSNGVSPDIVTY 565

Query: 539 SIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQ 598
           S ++ VL     ++EA  +F  ++     P   +Y  ++    K  N   A +++  M+ 
Sbjct: 566 SSIIGVLSREDRVEEAIKMFHIVQDLGMRPKAVIYNKILLALCKRCNTDGAIDFFAYMVS 625

Query: 599 AGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGL 636
            G  PN  T  +L+        L +   LL+ + + G+
Sbjct: 626 NGCMPNELTYITLIEGLANEDFLKETRDLLRELCSRGV 663



 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 32/108 (29%), Positives = 58/108 (53%), Gaps = 2/108 (1%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRD-GCQPNVVTYNRLIHSYGRANYLNE 413
           G   D  TY++++G+L R  +     K+   +V+D G +P  V YN+++ +  +    + 
Sbjct: 557 GVSPDIVTYSSIIGVLSREDRVEEAIKMF-HIVQDLGMRPKAVIYNKILLALCKRCNTDG 615

Query: 414 ALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGL 461
           A+D F  M   GC P+ +TY TLI+  A   FL    D+ +++ + G+
Sbjct: 616 AIDFFAYMVSNGCMPNELTYITLIEGLANEDFLKETRDLLRELCSRGV 663



 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 61/257 (23%), Positives = 101/257 (39%), Gaps = 9/257 (3%)

Query: 481 LQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSI 540
           L  A +L     ++G  P++     +I    +      A ++ R  + +G   D   Y+ 
Sbjct: 59  LAEAARLVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAVDVFAYNT 118

Query: 541 VMEVLGHCGY--LDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQ 598
           +  V G+C Y  LD A  + A M      PD   Y  ++      G V +A    + ML 
Sbjct: 119 L--VAGYCRYGQLDAARRLIASM---PVAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLH 173

Query: 599 AGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS-CCTEARSPY 657
            G +P+V T   LL A  +      A  +L  M   G  P++ TY ++++  C E R   
Sbjct: 174 RGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDD 233

Query: 658 DMGFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRESKRGLVDAVV 717
              F + L +    P  +   ++       +   D    F EMM      ++    D +V
Sbjct: 234 AREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTF-DMLV 292

Query: 718 DFLHKSGLKEEAGSVWE 734
            F  + G+ E A  V E
Sbjct: 293 RFFCRGGMVERAIQVLE 309


>gi|255660786|gb|ACU25562.1| pentatricopeptide repeat-containing protein [Verbena canescens]
          Length = 418

 Score =  149 bits (375), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 84/279 (30%), Positives = 152/279 (54%)

Query: 370 LGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPD 429
           L + + F  +    ++ +  G   ++  +N L+HS+ +   +  A  VF  +      P 
Sbjct: 111 LMKLKYFKLVWGFYEESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPS 170

Query: 430 RVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFC 489
            V++ TL++ + K G LD    +   MQA+G+ PD +TYSV+IN L K   +  A++LF 
Sbjct: 171 VVSFNTLMNGYIKLGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFD 230

Query: 490 EMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCG 549
           EM++ G +PN VT+  +I    K      A+++Y+ M +    PD +TY+ ++  L   G
Sbjct: 231 EMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKG 290

Query: 550 YLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCN 609
            L +A+ +  EM  K   PD+  Y  L+D   K G++  A+E+ + M++  +R +     
Sbjct: 291 DLKQAQDLIDEMSMKGLKPDKITYTTLIDGNCKEGDLETAFEYRKKMIKENIRLDDVAYT 350

Query: 610 SLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
           +L+S   + G+  DA  +L+ ML++GLKP + TYT++++
Sbjct: 351 ALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIIN 389



 Score =  121 bits (303), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 79/316 (25%), Positives = 155/316 (49%), Gaps = 10/316 (3%)

Query: 335 KQLQDHTVALGFFNWL------RRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVR 388
           +++ +H + L +F  +        + G+    + +  ++    +  +      + D + +
Sbjct: 105 RKVLEHLMKLKYFKLVWGFYEESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITK 164

Query: 389 DGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDV 448
              +P+VV++N L++ Y +   L+E   +   MQ  G +PD  TY  LI+   K   +D 
Sbjct: 165 WSLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDD 224

Query: 449 AMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIA 508
           A +++ +M   GL P+  T++ +I+   K G +  A +++ +M++Q   P+L+TYN +I 
Sbjct: 225 ANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIY 284

Query: 509 LQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHC--GYLDEAEAVFAEMRRKNW 566
              K  + + A  L  +M   G +PDK+TY+ +++  G+C  G L+ A     +M ++N 
Sbjct: 285 GLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLID--GNCKEGDLETAFEYRKKMIKENI 342

Query: 567 VPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYH 626
             D+  Y  L+    + G    A +    ML  GL+P + T   +++ F + G +     
Sbjct: 343 RLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSK 402

Query: 627 LLQGMLNLGLKPSLQT 642
           LL+ M   G  PS+ T
Sbjct: 403 LLKEMQRDGYMPSVVT 418



 Score = 53.5 bits (127), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 33/139 (23%), Positives = 69/139 (49%), Gaps = 1/139 (0%)

Query: 517 QSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLL 576
           + A++ YR  +   F     T   V+E L    Y       + E     +      + +L
Sbjct: 83  RDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFYEESLECGYPASLYFFNIL 142

Query: 577 VDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGL 636
           +  + K G +R A   ++A+ +  LRP+V + N+L++ ++++G L + + L   M   G+
Sbjct: 143 MHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQASGV 202

Query: 637 KPSLQTYTLLLS-CCTEAR 654
           +P + TY++L++  C E++
Sbjct: 203 QPDVYTYSVLINGLCKESK 221


>gi|2244996|emb|CAB10416.1| salt-inducible protein homolog [Arabidopsis thaliana]
 gi|7268388|emb|CAB78681.1| salt-inducible protein homolog [Arabidopsis thaliana]
          Length = 777

 Score =  149 bits (375), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 122/524 (23%), Positives = 238/524 (45%), Gaps = 25/524 (4%)

Query: 332 QVLKQLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLD---QMVR 388
           +V ++ +D   +   F+ +  + G K D  T+TT++     ARQ G   + ++   +M  
Sbjct: 258 KVFRKSKDLEKSEKLFDEMLER-GIKPDNATFTTIISC---ARQNGVPKRAVEWFEKMSS 313

Query: 389 DGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDV 448
            GC+P+ VT   +I +YGRA  ++ AL ++ + +      D VT+ TLI I+  +G  D 
Sbjct: 314 FGCEPDNVTMAAMIDAYGRAGNVDMALSLYDRARTEKWRIDAVTFSTLIRIYGVSGNYDG 373

Query: 449 AMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIA 508
            +++Y++M+A G+ P+   Y+ +I+ +G+A     A  ++ +++  G  PN  TY  ++ 
Sbjct: 374 CLNIYEEMKALGVKPNLVIYNRLIDSMGRAKRPWQAKIIYKDLITNGFTPNWSTYAALVR 433

Query: 509 LQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRR-KNWV 567
              +AR    AL +YR+M+  G     + Y+ ++ +     ++DEA  +F +M+  +   
Sbjct: 434 AYGRARYGDDALAIYREMKEKGLSLTVILYNTLLSMCADNRHVDEAFEIFQDMKNCETCD 493

Query: 568 PDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHL 627
           PD   +  L+ ++  +G V KA      + +AG  P +    S++  + +  Q+ D    
Sbjct: 494 PDSWTFSSLITVYACSGRVSKAEAALLQIREAGFEPTLFVLTSVIQCYGKAKQVDDVVRT 553

Query: 628 LQGMLNLGLKPSLQTYTLLLSCCTEARSPYD---MGFCHELMAVSGHPAHMFLLSMPSPG 684
              +L LG+ P  +    LL+  T+  S      +G   +     G    M +       
Sbjct: 554 FDQVLELGITPDDRFCGCLLNVMTQTPSEEIGKLIGCVEKAKPKLGQVVKMLV------- 606

Query: 685 PDGQNVRDHV--GSFLEMMHSEDRESKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVY 742
            + QN  + V      E++ S   + K+  ++ ++D        E A  + ++  + ++Y
Sbjct: 607 -EEQNCEEGVFKKEASELIDSIGSDVKKAYLNCLIDLCVNLNKLERACEILQLGLEYDIY 665

Query: 743 PDAVKEKGMSYWLINLHVMSDGTAVIALSRTLAWFRKQMLISGVG-PSRIDIVTGWGRRS 801
              ++ K  + W ++L  +S G A+ AL   +    +  L SG   P  + I TG G+  
Sbjct: 666 -TGLQSKSATQWSLHLKSLSLGAALTALHVWMNDLSEAALESGEEFPPLLGINTGHGKH- 723

Query: 802 RVTGTSLVRQAVQELLHMFSFPFFTENGNSGCFVGCGEPLNKWL 845
           + +   L     +  L   + PF       G F+        WL
Sbjct: 724 KYSDKGLA-AVFESHLKELNAPFHEAPDKVGWFLTTSVAAKAWL 766



 Score =  101 bits (252), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 75/294 (25%), Positives = 134/294 (45%), Gaps = 16/294 (5%)

Query: 375 QFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQ------------ 422
           ++ ++ KL + +  D C+PN      +I  +G   +  +A+     M             
Sbjct: 183 RYSSLIKLAESL--DACKPNEADVCDVITGFGGKLFEQDAVVTLNNMTNPETAPLVLNNL 240

Query: 423 VVGCEPDR--VTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGH 480
           +   +P R  + Y   + +  K+  L+ +  ++ +M   G+ PD  T++ II+C  + G 
Sbjct: 241 LETMKPSREVILYNVTMKVFRKSKDLEKSEKLFDEMLERGIKPDNATFTTIISCARQNGV 300

Query: 481 LQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSI 540
            + A + F +M + GC P+ VT   MI    +A N   AL LY   +   +  D VT+S 
Sbjct: 301 PKRAVEWFEKMSSFGCEPDNVTMAAMIDAYGRAGNVDMALSLYDRARTEKWRIDAVTFST 360

Query: 541 VMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAG 600
           ++ + G  G  D    ++ EM+     P+  +Y  L+D  G+A    +A   Y+ ++  G
Sbjct: 361 LIRIYGVSGNYDGCLNIYEEMKALGVKPNLVIYNRLIDSMGRAKRPWQAKIIYKDLITNG 420

Query: 601 LRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEAR 654
             PN  T  +L+ A+ R     DA  + + M   GL  ++  Y  LLS C + R
Sbjct: 421 FTPNWSTYAALVRAYGRARYGDDALAIYREMKEKGLSLTVILYNTLLSMCADNR 474



 Score = 68.9 bits (167), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 39/171 (22%), Positives = 79/171 (46%)

Query: 500 LVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFA 559
           ++ YN+ + +  K+++ + + KL+ +M   G +PD  T++ ++      G    A   F 
Sbjct: 250 VILYNVTMKVFRKSKDLEKSEKLFDEMLERGIKPDNATFTTIISCARQNGVPKRAVEWFE 309

Query: 560 EMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVG 619
           +M      PD      ++D +G+AGNV  A   Y+       R +  T ++L+  +   G
Sbjct: 310 KMSSFGCEPDNVTMAAMIDAYGRAGNVDMALSLYDRARTEKWRIDAVTFSTLIRIYGVSG 369

Query: 620 QLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGFCHELMAVSG 670
                 ++ + M  LG+KP+L  Y  L+     A+ P+     ++ +  +G
Sbjct: 370 NYDGCLNIYEEMKALGVKPNLVIYNRLIDSMGRAKRPWQAKIIYKDLITNG 420


>gi|115440343|ref|NP_001044451.1| Os01g0783100 [Oryza sativa Japonica Group]
 gi|20804869|dbj|BAB92551.1| putative PPR protein [Oryza sativa Japonica Group]
 gi|113533982|dbj|BAF06365.1| Os01g0783100 [Oryza sativa Japonica Group]
          Length = 684

 Score =  149 bits (375), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 124/498 (24%), Positives = 204/498 (40%), Gaps = 92/498 (18%)

Query: 359 DEHTYTTMV-GILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDV 417
           D +TYT ++ G+  R R  G    LLD M+  GCQP+VVTY  L+ +  ++    +A++V
Sbjct: 144 DAYTYTPIIRGLCDRGR-VGEALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEV 202

Query: 418 FKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGK 477
             +M+  GC P+ VTY  +I+   + G +D A +   ++ + G  PDT +Y+ ++  L  
Sbjct: 203 LDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCA 262

Query: 478 AGHLQAAHQLFCEMVNQGCIPNLVTY---------------------------------- 503
           A   +   +LF EM+ + C+PN VT+                                  
Sbjct: 263 AKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTL 322

Query: 504 -NIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMR 562
            NI+I    K      A +   +M + G  PD ++Y+ V++ L      ++A+ +  EM 
Sbjct: 323 CNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMV 382

Query: 563 RKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLS 622
           RKN  P+E  +   + +  + G + +A    E M + G   N+ T N+L++ F   G++ 
Sbjct: 383 RKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVD 442

Query: 623 DAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGFCHELMAVSGHPAHMFLLSMPS 682
            A  L   M     KP+  TYT LL+           G C+                   
Sbjct: 443 SALELFYSM---PCKPNTITYTTLLT-----------GLCN------------------- 469

Query: 683 PGPDGQNVRDHVGSFLEMMHSEDRESKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVY 742
                    D     L  M  +D        + +V F  + GL +EA  + E        
Sbjct: 470 -----AERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVE-------- 516

Query: 743 PDAVKEKGMSYWLINLHVMSDGTAVIALSRTLAWFRKQMLISGVGPSRIDIVTGWGRRSR 802
              + E G +  LI  + + DG      S         ++ +GV P   DIVT     S 
Sbjct: 517 --QMMEHGCTPNLITYNTLLDGITKDCNSEEALELLHGLVSNGVSP---DIVT----YSS 567

Query: 803 VTGTSLVRQAVQELLHMF 820
           + G       V+E + MF
Sbjct: 568 IIGVLSREDRVEEAIKMF 585



 Score =  145 bits (366), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 91/334 (27%), Positives = 156/334 (46%), Gaps = 33/334 (9%)

Query: 346 FFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSY 405
           F N L    GF+ D  +YTT++  L  A+++  + +L  +M+   C PN VT++ L+  +
Sbjct: 237 FLNRLS-SYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFF 295

Query: 406 GRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDT 465
            R   +  A+ V +QM   GC  +      +I+   K G +D A      M + G SPDT
Sbjct: 296 CRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDT 355

Query: 466 FTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRD 525
            +Y+ ++  L +A   + A +L  EMV + C PN VT+N  I +  +    + A  L   
Sbjct: 356 ISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQ 415

Query: 526 MQNAGFE--------------------------------PDKVTYSIVMEVLGHCGYLDE 553
           M   G E                                P+ +TY+ ++  L +   LD 
Sbjct: 416 MSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSMPCKPNTITYTTLLTGLCNAERLDA 475

Query: 554 AEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLS 613
           A  + AEM +K+  P+   + +LV  + + G + +A E  E M++ G  PN+ T N+LL 
Sbjct: 476 AAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNTLLD 535

Query: 614 AFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
              +     +A  LL G+++ G+ P + TY+ ++
Sbjct: 536 GITKDCNSEEALELLHGLVSNGVSPDIVTYSSII 569



 Score =  135 bits (339), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 83/293 (28%), Positives = 138/293 (47%), Gaps = 3/293 (1%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           G   D +  T ++  L R  +     ++L    R G   +V  YN L+  Y R   L+ A
Sbjct: 73  GEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAVDVFAYNTLVAGYCRYGQLDAA 132

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
             +   M V    PD  TY  +I      G +  A+ +   M   G  P   TY+V++  
Sbjct: 133 RRLIASMPVA---PDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQPSVVTYTVLLEA 189

Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPD 534
           + K+     A ++  EM  +GC PN+VTYN++I    +      A +    + + GF+PD
Sbjct: 190 VCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPD 249

Query: 535 KVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYE 594
            V+Y+ V++ L      ++ E +FAEM  KN +P+E  + +LV  + + G V +A +  E
Sbjct: 250 TVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLE 309

Query: 595 AMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
            M   G   N   CN +++   + G++ DA+  L  M + G  P   +YT +L
Sbjct: 310 QMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVL 362



 Score =  131 bits (329), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 94/360 (26%), Positives = 164/360 (45%), Gaps = 15/360 (4%)

Query: 290 HFASTGNVVESVSRILRQWKWGPLAEEALGNTNYSMDAYQANQVLKQ--LQDHTVALGFF 347
            F   G +VE   ++L Q      A       N ++     N + KQ  + D   A  F 
Sbjct: 293 RFFCRGGMVERAIQVLEQMSGHGCA------ANTTLCNIVINTICKQGRVDD---AFQFL 343

Query: 348 NWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGR 407
           N +    G   D  +YTT++  L RA ++    +LL +MVR  C PN VT+N  I    +
Sbjct: 344 NNMG-SYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQ 402

Query: 408 ANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFT 467
              + +A  + +QM   GCE + VTY  L++     G +D A++++  M      P+T T
Sbjct: 403 KGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSMPC---KPNTIT 459

Query: 468 YSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQ 527
           Y+ ++  L  A  L AA +L  EM+ + C PN+VT+N++++   +      A++L   M 
Sbjct: 460 YTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMM 519

Query: 528 NAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVR 587
             G  P+ +TY+ +++ +      +EA  +   +      PD   Y  ++ +  +   V 
Sbjct: 520 EHGCTPNLITYNTLLDGITKDCNSEEALELLHGLVSNGVSPDIVTYSSIIGVLSREDRVE 579

Query: 588 KAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
           +A + +  +   G+RP     N +L A  +      A      M++ G  P+  TY  L+
Sbjct: 580 EAIKMFHIVQDLGMRPKAVIYNKILLALCKRCNTDGAIDFFAYMVSNGCMPNELTYITLI 639



 Score =  128 bits (321), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 78/278 (28%), Positives = 140/278 (50%), Gaps = 3/278 (1%)

Query: 359 DEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVF 418
           +E T+ T + IL +         L++QM   GC+ N+VTYN L++ +     ++ AL++F
Sbjct: 389 NEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELF 448

Query: 419 KQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKA 478
             M    C+P+ +TY TL+     A  LD A ++  +M     +P+  T++V+++   + 
Sbjct: 449 YSMP---CKPNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQK 505

Query: 479 GHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTY 538
           G +  A +L  +M+  GC PNL+TYN ++    K  N + AL+L   + + G  PD VTY
Sbjct: 506 GLMDEAIELVEQMMEHGCTPNLITYNTLLDGITKDCNSEEALELLHGLVSNGVSPDIVTY 565

Query: 539 SIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQ 598
           S ++ VL     ++EA  +F  ++     P   +Y  ++    K  N   A +++  M+ 
Sbjct: 566 SSIIGVLSREDRVEEAIKMFHIVQDLGMRPKAVIYNKILLALCKRCNTDGAIDFFAYMVS 625

Query: 599 AGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGL 636
            G  PN  T  +L+        L +   LL+ + + G+
Sbjct: 626 NGCMPNELTYITLIEGLANEDFLKETRDLLRELCSRGV 663



 Score =  116 bits (291), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 70/301 (23%), Positives = 141/301 (46%), Gaps = 4/301 (1%)

Query: 381 KLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIH 440
           + L+ M   GC P+ ++Y  ++    RA    +A ++ K+M    C P+ VT+ T I I 
Sbjct: 341 QFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICIL 400

Query: 441 AKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNL 500
            + G ++ A  + ++M   G   +  TY+ ++N     G + +A +LF  M    C PN 
Sbjct: 401 CQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSM---PCKPNT 457

Query: 501 VTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAE 560
           +TY  ++     A    +A +L  +M      P+ VT+++++      G +DEA  +  +
Sbjct: 458 ITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQ 517

Query: 561 MRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQ 620
           M      P+   Y  L+D   K  N  +A E    ++  G+ P++ T +S++    R  +
Sbjct: 518 MMEHGCTPNLITYNTLLDGITKDCNSEEALELLHGLVSNGVSPDIVTYSSIIGVLSREDR 577

Query: 621 LSDAYHLLQGMLNLGLKPSLQTYT-LLLSCCTEARSPYDMGFCHELMAVSGHPAHMFLLS 679
           + +A  +   + +LG++P    Y  +LL+ C    +   + F   +++    P  +  ++
Sbjct: 578 VEEAIKMFHIVQDLGMRPKAVIYNKILLALCKRCNTDGAIDFFAYMVSNGCMPNELTYIT 637

Query: 680 M 680
           +
Sbjct: 638 L 638



 Score =  111 bits (278), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 69/251 (27%), Positives = 125/251 (49%), Gaps = 18/251 (7%)

Query: 329 QANQVLKQLQDHTVALGFFNWLRRQAGF------------------KHDEHTYTTMVGIL 370
           QA  +++Q+ +H   +    +     GF                  K +  TYTT++  L
Sbjct: 408 QATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSMPCKPNTITYTTLLTGL 467

Query: 371 GRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDR 430
             A +  A  +LL +M++  C PNVVT+N L+  + +   ++EA+++ +QM   GC P+ 
Sbjct: 468 CNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNL 527

Query: 431 VTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCE 490
           +TY TL+D   K    + A+++   + + G+SPD  TYS II  L +   ++ A ++F  
Sbjct: 528 ITYNTLLDGITKDCNSEEALELLHGLVSNGVSPDIVTYSSIIGVLSREDRVEEAIKMFHI 587

Query: 491 MVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGY 550
           + + G  P  V YN ++    K  N   A+  +  M + G  P+++TY  ++E L +  +
Sbjct: 588 VQDLGMRPKAVIYNKILLALCKRCNTDGAIDFFAYMVSNGCMPNELTYITLIEGLANEDF 647

Query: 551 LDEAEAVFAEM 561
           L E   +  E+
Sbjct: 648 LKETRDLLREL 658



 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 32/108 (29%), Positives = 58/108 (53%), Gaps = 2/108 (1%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRD-GCQPNVVTYNRLIHSYGRANYLNE 413
           G   D  TY++++G+L R  +     K+   +V+D G +P  V YN+++ +  +    + 
Sbjct: 557 GVSPDIVTYSSIIGVLSREDRVEEAIKMF-HIVQDLGMRPKAVIYNKILLALCKRCNTDG 615

Query: 414 ALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGL 461
           A+D F  M   GC P+ +TY TLI+  A   FL    D+ +++ + G+
Sbjct: 616 AIDFFAYMVSNGCMPNELTYITLIEGLANEDFLKETRDLLRELCSRGV 663



 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 61/257 (23%), Positives = 101/257 (39%), Gaps = 9/257 (3%)

Query: 481 LQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSI 540
           L  A +L     ++G  P++     +I    +      A ++ R  + +G   D   Y+ 
Sbjct: 59  LAEAARLVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAVDVFAYNT 118

Query: 541 VMEVLGHCGY--LDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQ 598
           +  V G+C Y  LD A  + A M      PD   Y  ++      G V +A    + ML 
Sbjct: 119 L--VAGYCRYGQLDAARRLIASM---PVAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLH 173

Query: 599 AGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS-CCTEARSPY 657
            G +P+V T   LL A  +      A  +L  M   G  P++ TY ++++  C E R   
Sbjct: 174 RGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDD 233

Query: 658 DMGFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRESKRGLVDAVV 717
              F + L +    P  +   ++       +   D    F EMM      ++    D +V
Sbjct: 234 AREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTF-DMLV 292

Query: 718 DFLHKSGLKEEAGSVWE 734
            F  + G+ E A  V E
Sbjct: 293 RFFCRGGMVERAIQVLE 309


>gi|242036829|ref|XP_002465809.1| hypothetical protein SORBIDRAFT_01g046200 [Sorghum bicolor]
 gi|241919663|gb|EER92807.1| hypothetical protein SORBIDRAFT_01g046200 [Sorghum bicolor]
          Length = 649

 Score =  149 bits (375), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 131/495 (26%), Positives = 230/495 (46%), Gaps = 33/495 (6%)

Query: 310 WGPLAEEA---LGNTNYSMDAYQANQVL----KQLQDHTVALGFFNWLRRQAGFKHDEHT 362
           W  LAEEA   + +++  ++AY  N ++    K L+    A    + + ++  F  D  T
Sbjct: 137 WPHLAEEAYRLVLSSDSEVNAYTLNIMVHSYCKSLE-FDKADTVISEMEKRCVFP-DVVT 194

Query: 363 YTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQ 422
           +  ++    RA    A   L+D M   G +P +VT+N ++    +    ++A +VF+ M 
Sbjct: 195 HNVLIDARFRAGDVDAAIALVDSMANKGLKPGIVTFNSVLKGLCKHRRFDKAKEVFRAMD 254

Query: 423 VVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQ 482
                PD  ++  LI    + G ++ AM  YK+MQ  G++PD  ++S +I      G + 
Sbjct: 255 QCSVAPDVRSFNILIGGFCRVGEVEEAMKFYKEMQQRGVTPDVVSFSCLIGLFSTRGKMD 314

Query: 483 AAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVM 542
            A     EM   G +P+ V Y ++I    +A +   AL++  +M   G  PD VTY+ ++
Sbjct: 315 HAAAYLREMKGLGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGLGCLPDVVTYNTLL 374

Query: 543 EVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLR 602
             L     L +AE +  EM+ +   PD   +  L+  + + GN  KA + ++ +L   LR
Sbjct: 375 NGLCKQHRLLDAEELLNEMKERGVTPDLCTFTTLIHGYCRDGNFEKALQLFDTLLHQRLR 434

Query: 603 PNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL-SCCTEARSPYDMGF 661
           P+V   NSL+    R G L+ A  L   M    + P+  TY++L+ S C + +     GF
Sbjct: 435 PDVVAYNSLIDGMCRKGDLAKANELWDDMHAREIFPNHVTYSILIDSHCEKGQVEEAFGF 494

Query: 662 CHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRESKRGLVDAVVDF-- 719
             E+++    P  M   S+        NV+     FL+ M  ++      ++  ++ F  
Sbjct: 495 LDEMVSKGNLPNIMTYNSIIKGYCRSGNVKKG-QQFLQKMMQDN------ILPDLITFNT 547

Query: 720 LHKSGLKEE----AGSVWEVAAQKNVYPDAVKEKGMSYWLINLHVMSDGTAVIALSRTLA 775
           L    +KEE    A +V+ +  ++ V PDAV     +Y +I ++  S+   +    R   
Sbjct: 548 LIHGYIKEENMHGAFNVFNIMEKEMVQPDAV-----TYNMI-INGFSEQGNMEEAGRVF- 600

Query: 776 WFRKQMLISGVGPSR 790
              K+M  SG+ P R
Sbjct: 601 ---KKMGASGIEPDR 612



 Score =  145 bits (365), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 106/409 (25%), Positives = 195/409 (47%), Gaps = 10/409 (2%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           G K    T+ +++  L + R+F    ++   M +    P+V ++N LI  + R   + EA
Sbjct: 222 GLKPGIVTFNSVLKGLCKHRRFDKAKEVFRAMDQCSVAPDVRSFNILIGGFCRVGEVEEA 281

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
           +  +K+MQ  G  PD V++  LI + +  G +D A    ++M+  GL PD   Y+++I  
Sbjct: 282 MKFYKEMQQRGVTPDVVSFSCLIGLFSTRGKMDHAAAYLREMKGLGLVPDGVIYTMVIGG 341

Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPD 534
             +AG +  A ++  EMV  GC+P++VTYN ++    K      A +L  +M+  G  PD
Sbjct: 342 FCRAGSMSEALRVRDEMVGLGCLPDVVTYNTLLNGLCKQHRLLDAEELLNEMKERGVTPD 401

Query: 535 KVTYSIVMEVLGHC--GYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEW 592
             T++ ++   G+C  G  ++A  +F  +  +   PD   Y  L+D   + G++ KA E 
Sbjct: 402 LCTFTTLIH--GYCRDGNFEKALQLFDTLLHQRLRPDVVAYNSLIDGMCRKGDLAKANEL 459

Query: 593 YEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTY-TLLLSCCT 651
           ++ M    + PN  T + L+ +    GQ+ +A+  L  M++ G  P++ TY +++   C 
Sbjct: 460 WDDMHAREIFPNHVTYSILIDSHCEKGQVEEAFGFLDEMVSKGNLPNIMTYNSIIKGYCR 519

Query: 652 EARSPYDMGFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRESKRG 711
                    F  ++M  +  P  +   ++       +N+      F  +M  E  +    
Sbjct: 520 SGNVKKGQQFLQKMMQDNILPDLITFNTLIHGYIKEENMHGAFNVF-NIMEKEMVQPDAV 578

Query: 712 LVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAVKEKGMSYWLINLHV 760
             + +++   + G  EEAG V++      + PD  +   MS  LIN HV
Sbjct: 579 TYNMIINGFSEQGNMEEAGRVFKKMGASGIEPD--RYTYMS--LINGHV 623



 Score =  144 bits (362), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 96/363 (26%), Positives = 185/363 (50%), Gaps = 6/363 (1%)

Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLI 402
           A+ F+  ++ Q G   D  +++ ++G+     +       L +M   G  P+ V Y  +I
Sbjct: 281 AMKFYKEMQ-QRGVTPDVVSFSCLIGLFSTRGKMDHAAAYLREMKGLGLVPDGVIYTMVI 339

Query: 403 HSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLS 462
             + RA  ++EAL V  +M  +GC PD VTY TL++   K   L  A ++  +M+  G++
Sbjct: 340 GGFCRAGSMSEALRVRDEMVGLGCLPDVVTYNTLLNGLCKQHRLLDAEELLNEMKERGVT 399

Query: 463 PDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKL 522
           PD  T++ +I+   + G+ + A QLF  +++Q   P++V YN +I    +  +   A +L
Sbjct: 400 PDLCTFTTLIHGYCRDGNFEKALQLFDTLLHQRLRPDVVAYNSLIDGMCRKGDLAKANEL 459

Query: 523 YRDMQNAGFEPDKVTYSIVMEVLGHC--GYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLW 580
           + DM      P+ VTYSI+++   HC  G ++EA     EM  K  +P+   Y  ++  +
Sbjct: 460 WDDMHAREIFPNHVTYSILID--SHCEKGQVEEAFGFLDEMVSKGNLPNIMTYNSIIKGY 517

Query: 581 GKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSL 640
            ++GNV+K  ++ + M+Q  + P++ T N+L+  +++   +  A+++   M    ++P  
Sbjct: 518 CRSGNVKKGQQFLQKMMQDNILPDLITFNTLIHGYIKEENMHGAFNVFNIMEKEMVQPDA 577

Query: 641 QTYTLLLSCCTEARSPYDMGFCHELMAVSG-HPAHMFLLSMPSPGPDGQNVRDHVGSFLE 699
            TY ++++  +E  +  + G   + M  SG  P     +S+ +      N ++      E
Sbjct: 578 VTYNMIINGFSEQGNMEEAGRVFKKMGASGIEPDRYTYMSLINGHVTAGNSKEAFQLHDE 637

Query: 700 MMH 702
           MMH
Sbjct: 638 MMH 640



 Score =  130 bits (326), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 78/285 (27%), Positives = 143/285 (50%), Gaps = 10/285 (3%)

Query: 359 DEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVF 418
           D  TY T++  L +  +     +LL++M   G  P++ T+  LIH Y R     +AL +F
Sbjct: 366 DVVTYNTLLNGLCKQHRLLDAEELLNEMKERGVTPDLCTFTTLIHGYCRDGNFEKALQLF 425

Query: 419 KQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKA 478
             +      PD V Y +LID   + G L  A +++  M A  + P+  TYS++I+   + 
Sbjct: 426 DTLLHQRLRPDVVAYNSLIDGMCRKGDLAKANELWDDMHAREIFPNHVTYSILIDSHCEK 485

Query: 479 GHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTY 538
           G ++ A     EMV++G +PN++TYN +I    ++ N +   +  + M      PD +T+
Sbjct: 486 GQVEEAFGFLDEMVSKGNLPNIMTYNSIIKGYCRSGNVKKGQQFLQKMMQDNILPDLITF 545

Query: 539 SIVMEVLGHCGYLDE-----AEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWY 593
           + ++      GY+ E     A  VF  M ++   PD   Y ++++ + + GN+ +A   +
Sbjct: 546 NTLIH-----GYIKEENMHGAFNVFNIMEKEMVQPDAVTYNMIINGFSEQGNMEEAGRVF 600

Query: 594 EAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKP 638
           + M  +G+ P+  T  SL++  +  G   +A+ L   M++ G  P
Sbjct: 601 KKMGASGIEPDRYTYMSLINGHVTAGNSKEAFQLHDEMMHRGFAP 645



 Score =  127 bits (318), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 71/253 (28%), Positives = 126/253 (49%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           ++ G   D  T+TT++    R   F    +L D ++    +P+VV YN LI    R   L
Sbjct: 394 KERGVTPDLCTFTTLIHGYCRDGNFEKALQLFDTLLHQRLRPDVVAYNSLIDGMCRKGDL 453

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
            +A +++  M      P+ VTY  LID H + G ++ A     +M + G  P+  TY+ I
Sbjct: 454 AKANELWDDMHAREIFPNHVTYSILIDSHCEKGQVEEAFGFLDEMVSKGNLPNIMTYNSI 513

Query: 472 INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF 531
           I    ++G+++   Q   +M+    +P+L+T+N +I    K  N   A  ++  M+    
Sbjct: 514 IKGYCRSGNVKKGQQFLQKMMQDNILPDLITFNTLIHGYIKEENMHGAFNVFNIMEKEMV 573

Query: 532 EPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWE 591
           +PD VTY++++      G ++EA  VF +M      PD   Y  L++    AGN ++A++
Sbjct: 574 QPDAVTYNMIINGFSEQGNMEEAGRVFKKMGASGIEPDRYTYMSLINGHVTAGNSKEAFQ 633

Query: 592 WYEAMLQAGLRPN 604
            ++ M+  G  P+
Sbjct: 634 LHDEMMHRGFAPD 646



 Score =  103 bits (256), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 71/276 (25%), Positives = 128/276 (46%), Gaps = 35/276 (12%)

Query: 407 RANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTF 466
           RA + + A + ++ +     E +  T   ++  + K+   D A  +  +M+   + PD  
Sbjct: 134 RAGWPHLAEEAYRLVLSSDSEVNAYTLNIMVHSYCKSLEFDKADTVISEMEKRCVFPDVV 193

Query: 467 TYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNY---------- 516
           T++V+I+   +AG + AA  L   M N+G  P +VT+N ++    K R +          
Sbjct: 194 THNVLIDARFRAGDVDAAIALVDSMANKGLKPGIVTFNSVLKGLCKHRRFDKAKEVFRAM 253

Query: 517 -------------------------QSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYL 551
                                    + A+K Y++MQ  G  PD V++S ++ +    G +
Sbjct: 254 DQCSVAPDVRSFNILIGGFCRVGEVEEAMKFYKEMQQRGVTPDVVSFSCLIGLFSTRGKM 313

Query: 552 DEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSL 611
           D A A   EM+    VPD  +Y +++  + +AG++ +A    + M+  G  P+V T N+L
Sbjct: 314 DHAAAYLREMKGLGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGLGCLPDVVTYNTL 373

Query: 612 LSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
           L+   +  +L DA  LL  M   G+ P L T+T L+
Sbjct: 374 LNGLCKQHRLLDAEELLNEMKERGVTPDLCTFTTLI 409


>gi|414592066|tpg|DAA42637.1| TPA: hypothetical protein ZEAMMB73_021738 [Zea mays]
          Length = 768

 Score =  149 bits (375), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 91/291 (31%), Positives = 148/291 (50%), Gaps = 4/291 (1%)

Query: 359 DEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVF 418
           D  TY T++  L +  +     + L +M+  GC P+  TYN +I  Y ++  L EA ++ 
Sbjct: 279 DVVTYNTLMRGLCKDSKVQEAAQYLGRMMNQGCIPDDFTYNTIIDGYCKSGMLQEATELL 338

Query: 419 KQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKA 478
           K     G  PDRVTYC+LI+     G ++ A++++ + QA  L PD   Y+ ++  L + 
Sbjct: 339 KDAVFKGFVPDRVTYCSLINGLCAEGDIERALELFNEAQAKDLKPDLVVYNSLVKGLCRQ 398

Query: 479 GHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTY 538
           G +  A Q+  EMV +GC P++ TYNI+I    K  N   A  +  D    G+ PD  T+
Sbjct: 399 GLILHALQVMNEMVEEGCHPDIWTYNIIINGLCKMGNISDAAVVMNDAIVKGYLPDVFTF 458

Query: 539 SIVMEVLGHCG--YLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAM 596
           + +++  G+C    LD A  +   M      PD   Y  +++   KAG  ++  E +E M
Sbjct: 459 NTLID--GYCKRLKLDSALQLVERMWTYGIAPDVITYNSVLNGLCKAGKAKEVNETFEEM 516

Query: 597 LQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
           +  G RPN  T N L+  F ++ QL +A  ++  M   GL P   ++  L+
Sbjct: 517 ILKGCRPNAITYNILIENFCKINQLEEASGVIVRMCQDGLVPDAVSFNTLI 567



 Score =  143 bits (360), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 87/306 (28%), Positives = 155/306 (50%), Gaps = 1/306 (0%)

Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLI 402
           AL  FN  + +   K D   Y ++V  L R        +++++MV +GC P++ TYN +I
Sbjct: 369 ALELFNEAQAK-DLKPDLVVYNSLVKGLCRQGLILHALQVMNEMVEEGCHPDIWTYNIII 427

Query: 403 HSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLS 462
           +   +   +++A  V     V G  PD  T+ TLID + K   LD A+ + ++M   G++
Sbjct: 428 NGLCKMGNISDAAVVMNDAIVKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWTYGIA 487

Query: 463 PDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKL 522
           PD  TY+ ++N L KAG  +  ++ F EM+ +GC PN +TYNI+I    K    + A  +
Sbjct: 488 PDVITYNSVLNGLCKAGKAKEVNETFEEMILKGCRPNAITYNILIENFCKINQLEEASGV 547

Query: 523 YRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGK 582
              M   G  PD V+++ ++      G LD A  +F ++  K +      + +L+  +  
Sbjct: 548 IVRMCQDGLVPDAVSFNTLIHGFCRNGDLDGAYLLFQKLDEKGYSATADTFNILIGAYSS 607

Query: 583 AGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQT 642
             N++ A + +  M+  G +P++ T   L+    +   +  AY  L  M++ G  PS+ T
Sbjct: 608 KLNMQMAEKIFGEMISKGYKPDLYTYRILVDGLCKAANVDRAYAHLAEMISKGFVPSMAT 667

Query: 643 YTLLLS 648
           +  +L+
Sbjct: 668 FGRMLN 673



 Score =  129 bits (325), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 78/256 (30%), Positives = 127/256 (49%)

Query: 393 PNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDM 452
           P+VVTYN L+    + + + EA     +M   GC PD  TY T+ID + K+G L  A ++
Sbjct: 278 PDVVTYNTLMRGLCKDSKVQEAAQYLGRMMNQGCIPDDFTYNTIIDGYCKSGMLQEATEL 337

Query: 453 YKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAK 512
            K     G  PD  TY  +IN L   G ++ A +LF E   +   P+LV YN ++    +
Sbjct: 338 LKDAVFKGFVPDRVTYCSLINGLCAEGDIERALELFNEAQAKDLKPDLVVYNSLVKGLCR 397

Query: 513 ARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPV 572
                 AL++  +M   G  PD  TY+I++  L   G + +A  V  +   K ++PD   
Sbjct: 398 QGLILHALQVMNEMVEEGCHPDIWTYNIIINGLCKMGNISDAAVVMNDAIVKGYLPDVFT 457

Query: 573 YGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGML 632
           +  L+D + K   +  A +  E M   G+ P+V T NS+L+   + G+  +     + M+
Sbjct: 458 FNTLIDGYCKRLKLDSALQLVERMWTYGIAPDVITYNSVLNGLCKAGKAKEVNETFEEMI 517

Query: 633 NLGLKPSLQTYTLLLS 648
             G +P+  TY +L+ 
Sbjct: 518 LKGCRPNAITYNILIE 533



 Score =  120 bits (301), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 71/251 (28%), Positives = 130/251 (51%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           G+  D  T+ T++    +  +  +  +L+++M   G  P+V+TYN +++   +A    E 
Sbjct: 450 GYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWTYGIAPDVITYNSVLNGLCKAGKAKEV 509

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
            + F++M + GC P+ +TY  LI+   K   L+ A  +  +M   GL PD  +++ +I+ 
Sbjct: 510 NETFEEMILKGCRPNAITYNILIENFCKINQLEEASGVIVRMCQDGLVPDAVSFNTLIHG 569

Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPD 534
             + G L  A+ LF ++  +G      T+NI+I   +   N Q A K++ +M + G++PD
Sbjct: 570 FCRNGDLDGAYLLFQKLDEKGYSATADTFNILIGAYSSKLNMQMAEKIFGEMISKGYKPD 629

Query: 535 KVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYE 594
             TY I+++ L     +D A A  AEM  K +VP    +G +++L      V +A     
Sbjct: 630 LYTYRILVDGLCKAANVDRAYAHLAEMISKGFVPSMATFGRMLNLLAMNHRVSEAVAIIH 689

Query: 595 AMLQAGLRPNV 605
            M++ G+ P V
Sbjct: 690 IMVRMGVVPEV 700



 Score =  118 bits (295), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 72/288 (25%), Positives = 137/288 (47%)

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
           + G   D  TY  ++  L +         +++  +  G  P+V T+N LI  Y +   L+
Sbjct: 413 EEGCHPDIWTYNIIINGLCKMGNISDAAVVMNDAIVKGYLPDVFTFNTLIDGYCKRLKLD 472

Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
            AL + ++M   G  PD +TY ++++   KAG      + +++M   G  P+  TY+++I
Sbjct: 473 SALQLVERMWTYGIAPDVITYNSVLNGLCKAGKAKEVNETFEEMILKGCRPNAITYNILI 532

Query: 473 NCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFE 532
               K   L+ A  +   M   G +P+ V++N +I    +  +   A  L++ +   G+ 
Sbjct: 533 ENFCKINQLEEASGVIVRMCQDGLVPDAVSFNTLIHGFCRNGDLDGAYLLFQKLDEKGYS 592

Query: 533 PDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEW 592
               T++I++        +  AE +F EM  K + PD   Y +LVD   KA NV +A+  
Sbjct: 593 ATADTFNILIGAYSSKLNMQMAEKIFGEMISKGYKPDLYTYRILVDGLCKAANVDRAYAH 652

Query: 593 YEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSL 640
              M+  G  P++ T   +L+      ++S+A  ++  M+ +G+ P +
Sbjct: 653 LAEMISKGFVPSMATFGRMLNLLAMNHRVSEAVAIIHIMVRMGVVPEV 700



 Score =  117 bits (294), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 102/401 (25%), Positives = 178/401 (44%), Gaps = 17/401 (4%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           GF  D  TY +++  L          +L ++      +P++V YN L+    R   +  A
Sbjct: 345 GFVPDRVTYCSLINGLCAEGDIERALELFNEAQAKDLKPDLVVYNSLVKGLCRQGLILHA 404

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
           L V  +M   GC PD  TY  +I+   K G +  A  +       G  PD FT++ +I+ 
Sbjct: 405 LQVMNEMVEEGCHPDIWTYNIIINGLCKMGNISDAAVVMNDAIVKGYLPDVFTFNTLIDG 464

Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPD 534
             K   L +A QL   M   G  P+++TYN ++    KA   +   + + +M   G  P+
Sbjct: 465 YCKRLKLDSALQLVERMWTYGIAPDVITYNSVLNGLCKAGKAKEVNETFEEMILKGCRPN 524

Query: 535 KVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYE 594
            +TY+I++E       L+EA  V   M +   VPD   +  L+  + + G++  A+  ++
Sbjct: 525 AITYNILIENFCKINQLEEASGVIVRMCQDGLVPDAVSFNTLIHGFCRNGDLDGAYLLFQ 584

Query: 595 AMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEAR 654
            + + G      T N L+ A+     +  A  +   M++ G KP L TY +L+    +A 
Sbjct: 585 KLDEKGYSATADTFNILIGAYSSKLNMQMAEKIFGEMISKGYKPDLYTYRILVDGLCKA- 643

Query: 655 SPYDMGFCHELMAVSGHPAHMFLLSMPSPGP--DGQNVRDHVGSFLEMMHSEDRESKRGL 712
           +  D  + H    +S      F+ SM + G   +   +   V   + ++H   R    G+
Sbjct: 644 ANVDRAYAHLAEMISKG----FVPSMATFGRMLNLLAMNHRVSEAVAIIHIMVR---MGV 696

Query: 713 VDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAVKEKGMSY 753
           V  VVD +  +  K       E+AA K +  + +K+  +SY
Sbjct: 697 VPEVVDTILSTDKK-------EIAAPKILVEELMKKGHISY 730



 Score =  108 bits (270), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 82/289 (28%), Positives = 136/289 (47%), Gaps = 1/289 (0%)

Query: 382 LLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHA 441
           LL ++++ G   N  T N  I        L EA+ + ++M      PD VTY TL+    
Sbjct: 233 LLAKVLKRGMSANKFTCNIWIRGLCEDGRLEEAVALVERMGAY-VAPDVVTYNTLMRGLC 291

Query: 442 KAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLV 501
           K   +  A     +M   G  PD FTY+ II+   K+G LQ A +L  + V +G +P+ V
Sbjct: 292 KDSKVQEAAQYLGRMMNQGCIPDDFTYNTIIDGYCKSGMLQEATELLKDAVFKGFVPDRV 351

Query: 502 TYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEM 561
           TY  +I       + + AL+L+ + Q    +PD V Y+ +++ L   G +  A  V  EM
Sbjct: 352 TYCSLINGLCAEGDIERALELFNEAQAKDLKPDLVVYNSLVKGLCRQGLILHALQVMNEM 411

Query: 562 RRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQL 621
             +   PD   Y ++++   K GN+  A       +  G  P+V T N+L+  + +  +L
Sbjct: 412 VEEGCHPDIWTYNIIINGLCKMGNISDAAVVMNDAIVKGYLPDVFTFNTLIDGYCKRLKL 471

Query: 622 SDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGFCHELMAVSG 670
             A  L++ M   G+ P + TY  +L+   +A    ++    E M + G
Sbjct: 472 DSALQLVERMWTYGIAPDVITYNSVLNGLCKAGKAKEVNETFEEMILKG 520



 Score = 87.4 bits (215), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 106/525 (20%), Positives = 190/525 (36%), Gaps = 82/525 (15%)

Query: 363 YTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQ 422
           Y   +    RA +  A     ++M    C P    YN ++ +   A Y ++A  V+ +M 
Sbjct: 74  YVASIQAYARAGRLRAAVDAFERMDLFACPPAAPAYNAIMDALVNAAYHDQAHKVYVRML 133

Query: 423 VVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQ 482
             G  PD  T+   +      G   VA+ + + +   G       Y  ++  L   GH  
Sbjct: 134 AAGVAPDARTHTVRLKSFCLTGRPHVALRLLRSLSERGCDAKPAAYCTVVRGLYAHGHGY 193

Query: 483 AAHQLFCEMVNQGCIPNLVTY-NIMIALQAKARNYQS----ALKLYRDMQNAGFE----- 532
            A  LF EM+ +   P++ T+ N++ AL  K    +S    A  L R M    F      
Sbjct: 194 NARHLFDEMLGRDVFPDVATFNNVLHALCQKGDVMESGALLAKVLKRGMSANKFTCNIWI 253

Query: 533 ------------------------PDKVTYSIVMEVL----------------------- 545
                                   PD VTY+ +M  L                       
Sbjct: 254 RGLCEDGRLEEAVALVERMGAYVAPDVVTYNTLMRGLCKDSKVQEAAQYLGRMMNQGCIP 313

Query: 546 ----------GHC--GYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWY 593
                     G+C  G L EA  +  +   K +VPD   Y  L++     G++ +A E +
Sbjct: 314 DDFTYNTIIDGYCKSGMLQEATELLKDAVFKGFVPDRVTYCSLINGLCAEGDIERALELF 373

Query: 594 EAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEA 653
                  L+P++   NSL+    R G +  A  ++  M+  G  P + TY ++++   + 
Sbjct: 374 NEAQAKDLKPDLVVYNSLVKGLCRQGLILHALQVMNEMVEEGCHPDIWTYNIIINGLCKM 433

Query: 654 RSPYDMGFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRESKRGLV 713
            +  D         V G+   +F  +    G   +   D     +E M +          
Sbjct: 434 GNISDAAVVMNDAIVKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWTYGIAPDVITY 493

Query: 714 DAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAVKEKGMSYWLINLHVMSDGTAVIALSRT 773
           ++V++ L K+G  +E    +E    K   P+A+    +      ++ + + + VI     
Sbjct: 494 NSVLNGLCKAGKAKEVNETFEEMILKGCRPNAITYNILIENFCKINQLEEASGVIV---- 549

Query: 774 LAWFRKQMLISGVGPSRID---IVTGWGRRSRVTGTSLVRQAVQE 815
                 +M   G+ P  +    ++ G+ R   + G  L+ Q + E
Sbjct: 550 ------RMCQDGLVPDAVSFNTLIHGFCRNGDLDGAYLLFQKLDE 588



 Score = 47.8 bits (112), Expect = 0.028,   Method: Compositional matrix adjust.
 Identities = 33/120 (27%), Positives = 56/120 (46%), Gaps = 4/120 (3%)

Query: 538 YSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPD--EPVYGLLVDLWGKAGNVRKAWEWYEA 595
           Y  ++  L   G LD+ +A  A  R  +  PD  +P+Y   +  + +AG +R A + +E 
Sbjct: 38  YRALIRELVSAGRLDDVDAALASAR-SHLAPDSLQPLYVASIQAYARAGRLRAAVDAFER 96

Query: 596 MLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL-SCCTEAR 654
           M      P  P  N+++ A +       A+ +   ML  G+ P  +T+T+ L S C   R
Sbjct: 97  MDLFACPPAAPAYNAIMDALVNAAYHDQAHKVYVRMLAAGVAPDARTHTVRLKSFCLTGR 156


>gi|242055005|ref|XP_002456648.1| hypothetical protein SORBIDRAFT_03g040130 [Sorghum bicolor]
 gi|241928623|gb|EES01768.1| hypothetical protein SORBIDRAFT_03g040130 [Sorghum bicolor]
          Length = 702

 Score =  149 bits (375), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 93/313 (29%), Positives = 152/313 (48%), Gaps = 2/313 (0%)

Query: 362 TYTTMVGILGRARQFGAINKLLDQMVRDG-CQPNVVTYNRLIHSYGRANYLNEALDVFKQ 420
           TY  M   L  +       +LL Q+  D  C P+ VT+  LIH      Y N A ++ + 
Sbjct: 370 TYNIMTKGLLDSGMVSEATELLKQLENDASCSPDKVTFGTLIHGLCENGYANRAFEILED 429

Query: 421 MQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGH 480
            +  G E D  +Y ++I+   K G    A ++YK M   G  P++  Y+ +IN   +   
Sbjct: 430 ARNSGEELDVFSYSSMINRFCKDGRTHDANEVYKNMVKDGCKPNSHVYNALINGFCRVSK 489

Query: 481 LQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSI 540
           +  A +++ EM + GC P ++TYN +I    KA  YQ A  L ++M   GF+PD  TY+ 
Sbjct: 490 INDAIKIYIEMTSNGCCPTIITYNTLIDGLCKAEKYQEASSLTKEMLERGFKPDIRTYAS 549

Query: 541 VMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAG 600
           ++  L     +D A  ++ E+       D  V+ +L+     AG V +A+  Y  M +  
Sbjct: 550 LIRGLCRDKKVDVALRIWDEILDAGLQVDVMVHNILIHGLCSAGKVDEAFCIYLEMKEKN 609

Query: 601 LRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTY-TLLLSCCTEARSPYDM 659
             PN+ T N+L+  F  +G +  A  L   +L+ GLKP + TY T +   C+  R+P  +
Sbjct: 610 CSPNLVTYNTLMDGFYEIGSIDKAASLWTAILDNGLKPDIVTYNTRIKGLCSCNRTPEGV 669

Query: 660 GFCHELMAVSGHP 672
              +E++A    P
Sbjct: 670 LLLNEVLATGIMP 682



 Score =  120 bits (301), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 117/497 (23%), Positives = 207/497 (41%), Gaps = 89/497 (17%)

Query: 331 NQVLKQL---QDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMV 387
           N +L+ L    D   A+  F+ LRR+ G   D  TY+T++  L +  Q      LLD+M 
Sbjct: 162 NIILRSLCARGDVDRAVSLFSSLRRR-GVAPDRVTYSTLMSGLAKHDQLDNALDLLDEMP 220

Query: 388 RDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQM-QVVGCEPDRVTYCTLIDIHAKAGFL 446
             G Q + V YN L+    R     +A+ V++Q+ +  G  P+  TY  ++D   K G  
Sbjct: 221 NYGVQADAVCYNALLSGCFRTGMFEKAMKVWEQLVRDPGASPNLATYKVMLDGLCKLGRF 280

Query: 447 DVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGC---------- 496
             A +++ +M A     DT TY ++I+ L ++G + +A +++ +MV  G           
Sbjct: 281 KEAGEVWSRMMANNHQADTVTYGILIHGLCRSGDVDSAARVYSDMVKAGLVLDVSVYNSL 340

Query: 497 ------------------------IPNLVTYNIMIALQAKARNYQSALKLYRDMQN-AGF 531
                                   I  + TYNIM      +     A +L + ++N A  
Sbjct: 341 IKGFCEVGRTGEAWKFWDSTGFSGIRQITTYNIMTKGLLDSGMVSEATELLKQLENDASC 400

Query: 532 EPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWE 591
            PDKVT+  ++  L   GY + A  +  + R      D   Y  +++ + K G    A E
Sbjct: 401 SPDKVTFGTLIHGLCENGYANRAFEILEDARNSGEELDVFSYSSMINRFCKDGRTHDANE 460

Query: 592 WYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYH------------------------- 626
            Y+ M++ G +PN    N+L++ F RV +++DA                           
Sbjct: 461 VYKNMVKDGCKPNSHVYNALINGFCRVSKINDAIKIYIEMTSNGCCPTIITYNTLIDGLC 520

Query: 627 ----------LLQGMLNLGLKPSLQTY-TLLLSCCTEARSPYDMGFCHELM----AVSGH 671
                     L + ML  G KP ++TY +L+   C + +    +    E++     V   
Sbjct: 521 KAEKYQEASSLTKEMLERGFKPDIRTYASLIRGLCRDKKVDVALRIWDEILDAGLQVDVM 580

Query: 672 PAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRESKRGLV--DAVVDFLHKSGLKEEA 729
             ++ +  + S G     V +    +LEM   +++     LV  + ++D  ++ G  ++A
Sbjct: 581 VHNILIHGLCSAG----KVDEAFCIYLEM---KEKNCSPNLVTYNTLMDGFYEIGSIDKA 633

Query: 730 GSVWEVAAQKNVYPDAV 746
            S+W       + PD V
Sbjct: 634 ASLWTAILDNGLKPDIV 650



 Score =  116 bits (290), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 79/296 (26%), Positives = 145/296 (48%), Gaps = 6/296 (2%)

Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDG----CQPNVVTY 398
           AL  F  L    G      ++ T++    RAR++   +     +          PN+ TY
Sbjct: 102 ALAAFRDLPSLLGCNPGVRSHNTLLDAFVRARRYSDADAFFASLSHGAFGRRIAPNLQTY 161

Query: 399 NRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQA 458
           N ++ S      ++ A+ +F  ++  G  PDRVTY TL+   AK   LD A+D+  +M  
Sbjct: 162 NIILRSLCARGDVDRAVSLFSSLRRRGVAPDRVTYSTLMSGLAKHDQLDNALDLLDEMPN 221

Query: 459 AGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMV-NQGCIPNLVTYNIMIALQAKARNYQ 517
            G+  D   Y+ +++   + G  + A +++ ++V + G  PNL TY +M+    K   ++
Sbjct: 222 YGVQADAVCYNALLSGCFRTGMFEKAMKVWEQLVRDPGASPNLATYKVMLDGLCKLGRFK 281

Query: 518 SALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLV 577
            A +++  M     + D VTY I++  L   G +D A  V+++M +   V D  VY  L+
Sbjct: 282 EAGEVWSRMMANNHQADTVTYGILIHGLCRSGDVDSAARVYSDMVKAGLVLDVSVYNSLI 341

Query: 578 DLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLN 633
             + + G   +AW+++++   +G+R  + T N +    L  G +S+A  LL+ + N
Sbjct: 342 KGFCEVGRTGEAWKFWDSTGFSGIR-QITTYNIMTKGLLDSGMVSEATELLKQLEN 396



 Score =  111 bits (277), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 73/271 (26%), Positives = 128/271 (47%), Gaps = 35/271 (12%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           R +G + D  +Y++M+    +  +    N++   MV+DGC+PN   YN LI+ + R + +
Sbjct: 431 RNSGEELDVFSYSSMINRFCKDGRTHDANEVYKNMVKDGCKPNSHVYNALINGFCRVSKI 490

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKA----------------GF---------- 445
           N+A+ ++ +M   GC P  +TY TLID   KA                GF          
Sbjct: 491 NDAIKIYIEMTSNGCCPTIITYNTLIDGLCKAEKYQEASSLTKEMLERGFKPDIRTYASL 550

Query: 446 ---------LDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGC 496
                    +DVA+ ++ ++  AGL  D   ++++I+ L  AG +  A  ++ EM  + C
Sbjct: 551 IRGLCRDKKVDVALRIWDEILDAGLQVDVMVHNILIHGLCSAGKVDEAFCIYLEMKEKNC 610

Query: 497 IPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEA 556
            PNLVTYN ++    +  +   A  L+  + + G +PD VTY+  ++ L  C    E   
Sbjct: 611 SPNLVTYNTLMDGFYEIGSIDKAASLWTAILDNGLKPDIVTYNTRIKGLCSCNRTPEGVL 670

Query: 557 VFAEMRRKNWVPDEPVYGLLVDLWGKAGNVR 587
           +  E+     +P    + +LV    K G ++
Sbjct: 671 LLNEVLATGIMPTVITWSILVRAVIKYGPIQ 701


>gi|449511869|ref|XP_004164076.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g48810-like [Cucumis sativus]
          Length = 660

 Score =  149 bits (375), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 93/295 (31%), Positives = 155/295 (52%), Gaps = 3/295 (1%)

Query: 355 GFKHDEHTYTTMV-GILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNE 413
           G   + HT+T ++ G   R + + A++ L   M++DGC+PNVV YN LIH       L E
Sbjct: 309 GCDANIHTFTPLIKGCFMRGKLYEALD-LWKLMIQDGCEPNVVAYNTLIHGLCSNGSLEE 367

Query: 414 ALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIIN 473
           AL V  QMQ  GC P+  TY  LID  AK+G L  A + + +M + G  P+  TY+ +++
Sbjct: 368 ALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASETWNRMISHGCRPNVVTYTCMVD 427

Query: 474 CLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEP 533
            L K      A+ L  +M  +GC PN +T+N  I         + A+KL   MQ  G  P
Sbjct: 428 VLCKNSMFDQANSLVEKMTLEGCTPNTITFNTFIKGLCGNGRVEWAMKLLERMQGHGCLP 487

Query: 534 DKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWY 593
           +  TY+ +++ L      +EA  +F E+  +N  P+   Y  ++  + +AG + +A + +
Sbjct: 488 NITTYNELLDALFRMNKYEEAFGLFQEIEARNLQPNLVTYNTVLYGFSRAGMMGEALQLF 547

Query: 594 EAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLG-LKPSLQTYTLLL 647
              L  G  P+  T N+++ A+ + G++  A  L++ + ++    P + TYT L+
Sbjct: 548 GKALVRGTAPDSITYNTMIHAYCKQGKVKIAAQLVERVSSMKEWHPDIITYTSLI 602



 Score =  145 bits (366), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 97/352 (27%), Positives = 164/352 (46%), Gaps = 33/352 (9%)

Query: 329 QANQVLKQLQ---DHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQ 385
           Q + VLK+L+   + +  LGFF+ +     F+H   TY  M+  LGR  +   +  +L Q
Sbjct: 40  QESDVLKRLKTDRNLSSVLGFFSAIANSNAFQHTASTYRVMIERLGRECEMDMVQYILQQ 99

Query: 386 MVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGF 445
           M  DG       +  +I+ Y R     +AL +F ++   GC+P    Y  L+D       
Sbjct: 100 MKMDGINCCEDLFICIINGYKRVGSAEQALKMFYRIGEFGCKPTVRIYNHLLDALLSENK 159

Query: 446 LDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNI 505
             +   +Y  M+  GL P+ FTY++++  L K   + AAH+LF EM N+GC P+ VTY  
Sbjct: 160 FQMINPLYTNMKKDGLIPNVFTYNILLKALCKNDRVDAAHKLFVEMSNKGCPPDAVTYTT 219

Query: 506 MIALQAKARN------------------------------YQSALKLYRDMQNAGFEPDK 535
           M++   KA                                 + A+KL  +M + G +P+ 
Sbjct: 220 MVSSLCKAGKIDDARELAGRFKPSVPVYNALIDGMCKEGRIEVAIKLLGEMMDNGVDPNV 279

Query: 536 VTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEA 595
           V+YS ++  L   G ++ A A+FA+M  +    +   +  L+      G + +A + ++ 
Sbjct: 280 VSYSCIINSLCVSGNVELAFALFAQMFLRGCDANIHTFTPLIKGCFMRGKLYEALDLWKL 339

Query: 596 MLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
           M+Q G  PNV   N+L+      G L +A  +   M   G  P++ TY++L+
Sbjct: 340 MIQDGCEPNVVAYNTLIHGLCSNGSLEEALQVCDQMQRSGCLPNVTTYSILI 391



 Score =  135 bits (341), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 91/300 (30%), Positives = 152/300 (50%), Gaps = 5/300 (1%)

Query: 351 RRQAG-FKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRAN 409
           R  AG FK     Y  ++  + +  +     KLL +M+ +G  PNVV+Y+ +I+S   + 
Sbjct: 234 RELAGRFKPSVPVYNALIDGMCKEGRIEVAIKLLGEMMDNGVDPNVVSYSCIINSLCVSG 293

Query: 410 YLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYS 469
            +  A  +F QM + GC+ +  T+  LI      G L  A+D++K M   G  P+   Y+
Sbjct: 294 NVELAFALFAQMFLRGCDANIHTFTPLIKGCFMRGKLYEALDLWKLMIQDGCEPNVVAYN 353

Query: 470 VIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNA 529
            +I+ L   G L+ A Q+  +M   GC+PN+ TY+I+I   AK+ +   A + +  M + 
Sbjct: 354 TLIHGLCSNGSLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASETWNRMISH 413

Query: 530 GFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKA 589
           G  P+ VTY+ +++VL      D+A ++  +M  +   P+   +   +   G  GN R  
Sbjct: 414 GCRPNVVTYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTITFNTFIK--GLCGNGRVE 471

Query: 590 W--EWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
           W  +  E M   G  PN+ T N LL A  R+ +  +A+ L Q +    L+P+L TY  +L
Sbjct: 472 WAMKLLERMQGHGCLPNITTYNELLDALFRMNKYEEAFGLFQEIEARNLQPNLVTYNTVL 531



 Score =  132 bits (332), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 83/274 (30%), Positives = 136/274 (49%), Gaps = 1/274 (0%)

Query: 382 LLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHA 441
           L  QM   GC  N+ T+  LI        L EALD++K M   GCEP+ V Y TLI    
Sbjct: 301 LFAQMFLRGCDANIHTFTPLIKGCFMRGKLYEALDLWKLMIQDGCEPNVVAYNTLIHGLC 360

Query: 442 KAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLV 501
             G L+ A+ +  +MQ +G  P+  TYS++I+   K+G L  A + +  M++ GC PN+V
Sbjct: 361 SNGSLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASETWNRMISHGCRPNVV 420

Query: 502 TYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEM 561
           TY  M+ +  K   +  A  L   M   G  P+ +T++  ++ L   G ++ A  +   M
Sbjct: 421 TYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTITFNTFIKGLCGNGRVEWAMKLLERM 480

Query: 562 RRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQL 621
           +    +P+   Y  L+D   +     +A+  ++ +    L+PN+ T N++L  F R G +
Sbjct: 481 QGHGCLPNITTYNELLDALFRMNKYEEAFGLFQEIEARNLQPNLVTYNTVLYGFSRAGMM 540

Query: 622 SDAYHLLQGMLNLGLKPSLQTY-TLLLSCCTEAR 654
            +A  L    L  G  P   TY T++ + C + +
Sbjct: 541 GEALQLFGKALVRGTAPDSITYNTMIHAYCKQGK 574



 Score = 78.2 bits (191), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 53/206 (25%), Positives = 94/206 (45%), Gaps = 38/206 (18%)

Query: 362 TYTTMV-GILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQ 420
           T+ T + G+ G  R   A+ KLL++M   GC PN+ TYN L+ +  R N   EA  +F++
Sbjct: 456 TFNTFIKGLCGNGRVEWAM-KLLERMQGHGCLPNITTYNELLDALFRMNKYEEAFGLFQE 514

Query: 421 MQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGH 480
           ++    +P+ VTY T++   ++AG +  A+ ++ K    G +PD+ TY+ +I+   K G 
Sbjct: 515 IEARNLQPNLVTYNTVLYGFSRAGMMGEALQLFGKALVRGTAPDSITYNTMIHAYCKQGK 574

Query: 481 LQAAHQLF-----------------------C-------------EMVNQGCIPNLVTYN 504
           ++ A QL                        C             + +NQG  PN  T+N
Sbjct: 575 VKIAAQLVERVSSMKEWHPDIITYTSLIWGACNWMNIEEAMAFLDKAINQGICPNFATWN 634

Query: 505 IMIALQAKARNYQSALKLYRDMQNAG 530
            ++     +  +   + +  D+   G
Sbjct: 635 ALVRCFFDSLGHMGPIHILDDILRKG 660


>gi|357137687|ref|XP_003570431.1| PREDICTED: pentatricopeptide repeat-containing protein At5g14770,
           mitochondrial-like [Brachypodium distachyon]
          Length = 938

 Score =  149 bits (375), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 93/354 (26%), Positives = 167/354 (47%), Gaps = 15/354 (4%)

Query: 337 LQDHTVALGFFNWLRRQAG-------FKH---DEHT-----YTTMVGILGRARQFGAINK 381
           + D  +     +WL ++         F+H   D HT     YT ++  L +A       +
Sbjct: 346 VMDLIMYTALMDWLCKEGKIDEAKDMFRHALSDNHTPNGVTYTVLIDALCKAGNVDGAEQ 405

Query: 382 LLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHA 441
           +L +M      PNVVT++ +I+   +  ++ +A D  ++M+  G +P+ VTY T+ID   
Sbjct: 406 VLSEMEEKSISPNVVTFSSIINGLVKRGWVGKATDYMREMKERGIDPNVVTYGTVIDGSF 465

Query: 442 KAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLV 501
           K    + A+D+Y +M   G+  + F    ++N L K G ++ A  LF EM  +G + + V
Sbjct: 466 KCLGQEAALDVYHEMLCEGVEVNKFIVDSLVNGLKKNGKIEKAEALFREMNERGVLLDHV 525

Query: 502 TYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEM 561
            Y  +I    K  N  +A K+ +++      PD V Y++ +  L   G   EAE+   EM
Sbjct: 526 NYTTLIDGLFKTGNLPAAFKVGQELTEKNLLPDAVVYNVFINCLCMLGKSKEAESFLEEM 585

Query: 562 RRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQL 621
           +     PD+  Y  ++    + G   KA +    M ++ ++PN+ T ++L+      G +
Sbjct: 586 QSTGLKPDQVTYNTMIAAQSREGKTAKALKLLNGMKRSSIKPNLITYSTLIVGLFEAGAV 645

Query: 622 SDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGFCHELMAVSGHPAHM 675
             A +LL  M + G  P+  T+  +L  C++ R    +   HE M  +G  A +
Sbjct: 646 EKAKYLLNEMSSSGFSPTSLTHRRVLQACSQGRRSDLILEIHEWMMNAGLCADI 699



 Score =  142 bits (358), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 118/429 (27%), Positives = 201/429 (46%), Gaps = 30/429 (6%)

Query: 384 DQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKA 443
           ++M   G   +VV YN L+    RA  ++ A D+   M+  G EP+ VTY   I  + + 
Sbjct: 198 ERMKAQGVGVDVVGYNSLVAGLCRAGEVDAARDMVDTMKRDGVEPNVVTYTMFIVEYCRR 257

Query: 444 GFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTY 503
             +D A  +Y++M   G+ PD  T S ++  L K G    A+ LF EM   G  PN VTY
Sbjct: 258 NAVDDAFSLYEEMVRKGVLPDVVTLSALVGGLCKDGRFSEAYALFREMEKIGAAPNHVTY 317

Query: 504 NIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRR 563
            ++I   AKA+    +L L  ++ + G   D + Y+ +M+ L   G +DEA+ +F     
Sbjct: 318 CMLIDTLAKAQRGNESLSLLGEVVSRGVVMDLIMYTALMDWLCKEGKIDEAKDMFRHALS 377

Query: 564 KNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSD 623
            N  P+   Y +L+D   KAGNV  A +    M +  + PNV T +S+++  ++ G +  
Sbjct: 378 DNHTPNGVTYTVLIDALCKAGNVDGAEQVLSEMEEKSISPNVVTFSSIINGLVKRGWVGK 437

Query: 624 AYHLLQGMLNLGLKPSLQTYTLLLSC---CTEARSPYDMGFCHELMAVSGHPAHMFLL-S 679
           A   ++ M   G+ P++ TY  ++     C    +  D+   HE++   G   + F++ S
Sbjct: 438 ATDYMREMKERGIDPNVVTYGTVIDGSFKCLGQEAALDV--YHEMLC-EGVEVNKFIVDS 494

Query: 680 MPSPGPDGQNVRDHVGSFLEMMHSEDRESKRG-LVDAV-----VDFLHKSGLKEEAGSVW 733
           + +       +      F EM       ++RG L+D V     +D L K+G    A  V 
Sbjct: 495 LVNGLKKNGKIEKAEALFREM-------NERGVLLDHVNYTTLIDGLFKTGNLPAAFKVG 547

Query: 734 EVAAQKNVYPDAVKEKGMSYWLINLHVMSDGTAVIALSRTLAWFRKQMLISGVGPSRIDI 793
           +   +KN+ PDAV            +V  +   ++  S+    F ++M  +G+ P ++  
Sbjct: 548 QELTEKNLLPDAVV----------YNVFINCLCMLGKSKEAESFLEEMQSTGLKPDQVTY 597

Query: 794 VTGWGRRSR 802
            T    +SR
Sbjct: 598 NTMIAAQSR 606



 Score =  142 bits (357), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 87/304 (28%), Positives = 151/304 (49%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           +  G K D+ TY TM+    R  +     KLL+ M R   +PN++TY+ LI     A  +
Sbjct: 586 QSTGLKPDQVTYNTMIAAQSREGKTAKALKLLNGMKRSSIKPNLITYSTLIVGLFEAGAV 645

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
            +A  +  +M   G  P  +T+  ++   ++    D+ +++++ M  AGL  D   Y+ +
Sbjct: 646 EKAKYLLNEMSSSGFSPTSLTHRRVLQACSQGRRSDLILEIHEWMMNAGLCADITVYNTL 705

Query: 472 INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF 531
           +  L   G  + A  +  EM  +G  P+ +T+N +I    K+ +  +A   Y  M   G 
Sbjct: 706 VRVLCYNGMTRKAMVVLEEMSGRGIAPDTITFNALILGHFKSGHLDNAFSTYDQMLYHGI 765

Query: 532 EPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWE 591
            P+  T++ ++  L   G + E++ V  EM+++   P    Y +LV  +GK  N  +A  
Sbjct: 766 SPNVATFNTLLGGLESAGRIGESDMVLNEMKKRGIEPSNLTYDILVTGYGKQSNKVEAVR 825

Query: 592 WYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCT 651
            Y  M+  G  P V T N+L+S F +VG +S A  L   M N G+ P+  TY +L+S  +
Sbjct: 826 LYCEMVGKGFLPKVSTYNALISDFSKVGMMSQAKELFNEMQNRGVLPTSCTYDILVSGWS 885

Query: 652 EARS 655
           + R+
Sbjct: 886 KLRN 889



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 86/294 (29%), Positives = 150/294 (51%), Gaps = 4/294 (1%)

Query: 336 QLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNV 395
           ++ D   A      ++ Q G   D   Y ++V  L RA +  A   ++D M RDG +PNV
Sbjct: 186 KVGDMETAFAVAERMKAQ-GVGVDVVGYNSLVAGLCRAGEVDAARDMVDTMKRDGVEPNV 244

Query: 396 VTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKK 455
           VTY   I  Y R N +++A  ++++M   G  PD VT   L+    K G    A  ++++
Sbjct: 245 VTYTMFIVEYCRRNAVDDAFSLYEEMVRKGVLPDVVTLSALVGGLCKDGRFSEAYALFRE 304

Query: 456 MQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARN 515
           M+  G +P+  TY ++I+ L KA     +  L  E+V++G + +L+ Y  ++    K   
Sbjct: 305 MEKIGAAPNHVTYCMLIDTLAKAQRGNESLSLLGEVVSRGVVMDLIMYTALMDWLCKEGK 364

Query: 516 YQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGL 575
              A  ++R   +    P+ VTY+++++ L   G +D AE V +EM  K+  P+   +  
Sbjct: 365 IDEAKDMFRHALSDNHTPNGVTYTVLIDALCKAGNVDGAEQVLSEMEEKSISPNVVTFSS 424

Query: 576 LVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLL-SAFLRVGQLS--DAYH 626
           +++   K G V KA ++   M + G+ PNV T  +++  +F  +GQ +  D YH
Sbjct: 425 IINGLVKRGWVGKATDYMREMKERGIDPNVVTYGTVIDGSFKCLGQEAALDVYH 478



 Score =  136 bits (343), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 112/424 (26%), Positives = 187/424 (44%), Gaps = 43/424 (10%)

Query: 362 TYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQM 421
           TY  ++  L +A++      LL ++V  G   +++ Y  L+    +   ++EA D+F+  
Sbjct: 316 TYCMLIDTLAKAQRGNESLSLLGEVVSRGVVMDLIMYTALMDWLCKEGKIDEAKDMFRHA 375

Query: 422 QVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHL 481
                 P+ VTY  LID   KAG +D A  +  +M+   +SP+  T+S IIN L K G +
Sbjct: 376 LSDNHTPNGVTYTVLIDALCKAGNVDGAEQVLSEMEEKSISPNVVTFSSIINGLVKRGWV 435

Query: 482 QAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIV 541
             A     EM  +G  PN+VTY  +I    K    ++AL +Y +M   G E +K     +
Sbjct: 436 GKATDYMREMKERGIDPNVVTYGTVIDGSFKCLGQEAALDVYHEMLCEGVEVNKFIVDSL 495

Query: 542 MEVLGHCGYLDEAEAVFAEMR-----------------------------------RKNW 566
           +  L   G +++AEA+F EM                                     KN 
Sbjct: 496 VNGLKKNGKIEKAEALFREMNERGVLLDHVNYTTLIDGLFKTGNLPAAFKVGQELTEKNL 555

Query: 567 VPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYH 626
           +PD  VY + ++     G  ++A  + E M   GL+P+  T N++++A  R G+ + A  
Sbjct: 556 LPDAVVYNVFINCLCMLGKSKEAESFLEEMQSTGLKPDQVTYNTMIAAQSREGKTAKALK 615

Query: 627 LLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGFCHELMAVSGHP----AHMFLLSMPS 682
           LL GM    +KP+L TY+ L+    EA +     +    M+ SG       H  +L   S
Sbjct: 616 LLNGMKRSSIKPNLITYSTLIVGLFEAGAVEKAKYLLNEMSSSGFSPTSLTHRRVLQACS 675

Query: 683 PGPDGQNVRDHVGSFLEMMHSEDRESKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVY 742
            G       D +    E M +    +   + + +V  L  +G+  +A  V E  + + + 
Sbjct: 676 QGRRS----DLILEIHEWMMNAGLCADITVYNTLVRVLCYNGMTRKAMVVLEEMSGRGIA 731

Query: 743 PDAV 746
           PD +
Sbjct: 732 PDTI 735



 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 84/296 (28%), Positives = 145/296 (48%)

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
           + G   D   YTT++  L +     A  K+  ++      P+ V YN  I+         
Sbjct: 517 ERGVLLDHVNYTTLIDGLFKTGNLPAAFKVGQELTEKNLLPDAVVYNVFINCLCMLGKSK 576

Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
           EA    ++MQ  G +PD+VTY T+I   ++ G    A+ +   M+ + + P+  TYS +I
Sbjct: 577 EAESFLEEMQSTGLKPDQVTYNTMIAAQSREGKTAKALKLLNGMKRSSIKPNLITYSTLI 636

Query: 473 NCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFE 532
             L +AG ++ A  L  EM + G  P  +T+  ++   ++ R     L+++  M NAG  
Sbjct: 637 VGLFEAGAVEKAKYLLNEMSSSGFSPTSLTHRRVLQACSQGRRSDLILEIHEWMMNAGLC 696

Query: 533 PDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEW 592
            D   Y+ ++ VL + G   +A  V  EM  +   PD   +  L+    K+G++  A+  
Sbjct: 697 ADITVYNTLVRVLCYNGMTRKAMVVLEEMSGRGIAPDTITFNALILGHFKSGHLDNAFST 756

Query: 593 YEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
           Y+ ML  G+ PNV T N+LL      G++ ++  +L  M   G++PS  TY +L++
Sbjct: 757 YDQMLYHGISPNVATFNTLLGGLESAGRIGESDMVLNEMKKRGIEPSNLTYDILVT 812



 Score =  123 bits (309), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 75/278 (26%), Positives = 137/278 (49%)

Query: 354 AGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNE 413
           +GF     T+  ++    + R+   I ++ + M+  G   ++  YN L+          +
Sbjct: 658 SGFSPTSLTHRRVLQACSQGRRSDLILEIHEWMMNAGLCADITVYNTLVRVLCYNGMTRK 717

Query: 414 ALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIIN 473
           A+ V ++M   G  PD +T+  LI  H K+G LD A   Y +M   G+SP+  T++ ++ 
Sbjct: 718 AMVVLEEMSGRGIAPDTITFNALILGHFKSGHLDNAFSTYDQMLYHGISPNVATFNTLLG 777

Query: 474 CLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEP 533
            L  AG +  +  +  EM  +G  P+ +TY+I++    K  N   A++LY +M   GF P
Sbjct: 778 GLESAGRIGESDMVLNEMKKRGIEPSNLTYDILVTGYGKQSNKVEAVRLYCEMVGKGFLP 837

Query: 534 DKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWY 593
              TY+ ++      G + +A+ +F EM+ +  +P    Y +LV  W K  N  +  ++ 
Sbjct: 838 KVSTYNALISDFSKVGMMSQAKELFNEMQNRGVLPTSCTYDILVSGWSKLRNGTEVRKFL 897

Query: 594 EAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGM 631
           + M + G  P+  T +S+  AF + G   +A  LL+ +
Sbjct: 898 KDMKEKGFSPSKGTLSSISRAFSKPGMSWEARRLLKNL 935



 Score =  116 bits (291), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 84/306 (27%), Positives = 150/306 (49%), Gaps = 9/306 (2%)

Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINK---LLDQMVRDGCQPNVVTYN 399
           AL   N ++R +  K +  TY+T++  L  A   GA+ K   LL++M   G  P  +T+ 
Sbjct: 613 ALKLLNGMKRSS-IKPNLITYSTLIVGLFEA---GAVEKAKYLLNEMSSSGFSPTSLTHR 668

Query: 400 RLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAA 459
           R++ +  +    +  L++ + M   G   D   Y TL+ +    G    AM + ++M   
Sbjct: 669 RVLQACSQGRRSDLILEIHEWMMNAGLCADITVYNTLVRVLCYNGMTRKAMVVLEEMSGR 728

Query: 460 GLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMI-ALQAKARNYQS 518
           G++PDT T++ +I    K+GHL  A   + +M+  G  PN+ T+N ++  L++  R  +S
Sbjct: 729 GIAPDTITFNALILGHFKSGHLDNAFSTYDQMLYHGISPNVATFNTLLGGLESAGRIGES 788

Query: 519 ALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVD 578
            + L  +M+  G EP  +TY I++   G      EA  ++ EM  K ++P    Y  L+ 
Sbjct: 789 DMVL-NEMKKRGIEPSNLTYDILVTGYGKQSNKVEAVRLYCEMVGKGFLPKVSTYNALIS 847

Query: 579 LWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKP 638
            + K G + +A E +  M   G+ P   T + L+S + ++   ++    L+ M   G  P
Sbjct: 848 DFSKVGMMSQAKELFNEMQNRGVLPTSCTYDILVSGWSKLRNGTEVRKFLKDMKEKGFSP 907

Query: 639 SLQTYT 644
           S  T +
Sbjct: 908 SKGTLS 913



 Score = 98.6 bits (244), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 75/286 (26%), Positives = 133/286 (46%), Gaps = 3/286 (1%)

Query: 371 GRARQFG-AINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGC--E 427
           G + Q G A   LL +M + G   + VT N ++    R   ++ A  + + M   G    
Sbjct: 112 GFSEQGGLAPEALLAEMCKRGVPFDAVTVNTVLVGLCRDGRVDRAAALAEVMVRGGGIGG 171

Query: 428 PDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQL 487
            D V + +L+D + K G ++ A  + ++M+A G+  D   Y+ ++  L +AG + AA  +
Sbjct: 172 LDVVGWNSLVDGYCKVGDMETAFAVAERMKAQGVGVDVVGYNSLVAGLCRAGEVDAARDM 231

Query: 488 FCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGH 547
              M   G  PN+VTY + I    +      A  LY +M   G  PD VT S ++  L  
Sbjct: 232 VDTMKRDGVEPNVVTYTMFIVEYCRRNAVDDAFSLYEEMVRKGVLPDVVTLSALVGGLCK 291

Query: 548 CGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPT 607
            G   EA A+F EM +    P+   Y +L+D   KA    ++      ++  G+  ++  
Sbjct: 292 DGRFSEAYALFREMEKIGAAPNHVTYCMLIDTLAKAQRGNESLSLLGEVVSRGVVMDLIM 351

Query: 608 CNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEA 653
             +L+    + G++ +A  + +  L+    P+  TYT+L+    +A
Sbjct: 352 YTALMDWLCKEGKIDEAKDMFRHALSDNHTPNGVTYTVLIDALCKA 397



 Score = 75.1 bits (183), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 57/228 (25%), Positives = 107/228 (46%), Gaps = 3/228 (1%)

Query: 429 DRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLF 488
           D V+Y  ++   ++ G L     +  +M   G+  D  T + ++  L + G +  A  L 
Sbjct: 102 DTVSYNVVMSGFSEQGGL-APEALLAEMCKRGVPFDAVTVNTVLVGLCRDGRVDRAAALA 160

Query: 489 CEMVNQGCIPNL--VTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLG 546
             MV  G I  L  V +N ++    K  + ++A  +   M+  G   D V Y+ ++  L 
Sbjct: 161 EVMVRGGGIGGLDVVGWNSLVDGYCKVGDMETAFAVAERMKAQGVGVDVVGYNSLVAGLC 220

Query: 547 HCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVP 606
             G +D A  +   M+R    P+   Y + +  + +   V  A+  YE M++ G+ P+V 
Sbjct: 221 RAGEVDAARDMVDTMKRDGVEPNVVTYTMFIVEYCRRNAVDDAFSLYEEMVRKGVLPDVV 280

Query: 607 TCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEAR 654
           T ++L+    + G+ S+AY L + M  +G  P+  TY +L+    +A+
Sbjct: 281 TLSALVGGLCKDGRFSEAYALFREMEKIGAAPNHVTYCMLIDTLAKAQ 328


>gi|297837161|ref|XP_002886462.1| binding protein [Arabidopsis lyrata subsp. lyrata]
 gi|297332303|gb|EFH62721.1| binding protein [Arabidopsis lyrata subsp. lyrata]
          Length = 550

 Score =  149 bits (375), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 119/452 (26%), Positives = 208/452 (46%), Gaps = 61/452 (13%)

Query: 267 VSERFSKPS-REMKIPAGLAPF-----SRHFASTGNVVESVSRILRQWKWGPLAE----- 315
           + ER SK   R++K+   +  F     +R F S  +    +S I++  K+  +       
Sbjct: 52  LRERLSKTRLRDIKLHDAINLFREMVKTRPFPSIVDFNRLLSAIVKMKKYDVVISLGKKM 111

Query: 316 EALGNTNYSMDAYQANQVLKQLQ---DHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGR 372
           E LG  N   D Y  N V+         ++AL     + +  G++ D  T  ++V    R
Sbjct: 112 EVLGIRN---DLYTFNIVINCFCCCFQVSLALSVLGKMLK-LGYEPDRVTIGSLVNGFCR 167

Query: 373 ARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVT 432
             +      L+D+MV  G +P++V YN +I S  +   +N+ALD FK++   G  P+ VT
Sbjct: 168 RNRVSDAVSLVDKMVEIGYRPDIVAYNAIIDSLCKTRRVNDALDFFKEIGRKGIRPNVVT 227

Query: 433 YCTLI-----------------------------------DIHAKAGFLDVAMDMYKKMQ 457
           Y  L+                                   D   K G +  A +++++M 
Sbjct: 228 YTALVNGLCNSGRWNDAARLLRDMIKRKITPNVITYSALLDAFVKNGKVLEAKEIFEEMV 287

Query: 458 AAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQ 517
              + PD  TYS +IN L     +  A+Q+F  MV++GC P++V+YN +I    KA+  +
Sbjct: 288 RMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCFPDVVSYNTLINGFCKAKRVE 347

Query: 518 SALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLV 577
             +KL+R M   G   + VTY+ +++     G +D+A+  F++M      PD   Y +L+
Sbjct: 348 DGMKLFRKMSQRGLVNNTVTYNTLIQGFFQVGDVDKAQEFFSQMDSFGVSPDIWTYNILL 407

Query: 578 DLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLK 637
                 G + KA   +E M ++ +  ++ T  +++    + G++ DA+ L   +   GLK
Sbjct: 408 GGLCDNGLLEKALVIFEDMQKSEMDLDIVTYTTVIQGMCKTGKVEDAWGLFCSLSLKGLK 467

Query: 638 PSLQTYTLLLS-CCTEARSPYDMGFCHELMAV 668
           P + TYT ++S  CT+       G  HE+ A+
Sbjct: 468 PDIVTYTTMMSGLCTK-------GLQHEVEAL 492



 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 84/294 (28%), Positives = 149/294 (50%), Gaps = 1/294 (0%)

Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLI 402
           AL FF  + R+ G + +  TYT +V  L  + ++    +LL  M++    PNV+TY+ L+
Sbjct: 209 ALDFFKEIGRK-GIRPNVVTYTALVNGLCNSGRWNDAARLLRDMIKRKITPNVITYSALL 267

Query: 403 HSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLS 462
            ++ +   + EA ++F++M  +  +PD VTY +LI+       +D A  M+  M + G  
Sbjct: 268 DAFVKNGKVLEAKEIFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCF 327

Query: 463 PDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKL 522
           PD  +Y+ +IN   KA  ++   +LF +M  +G + N VTYN +I    +  +   A + 
Sbjct: 328 PDVVSYNTLINGFCKAKRVEDGMKLFRKMSQRGLVNNTVTYNTLIQGFFQVGDVDKAQEF 387

Query: 523 YRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGK 582
           +  M + G  PD  TY+I++  L   G L++A  +F +M++     D   Y  ++    K
Sbjct: 388 FSQMDSFGVSPDIWTYNILLGGLCDNGLLEKALVIFEDMQKSEMDLDIVTYTTVIQGMCK 447

Query: 583 AGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGL 636
            G V  AW  + ++   GL+P++ T  +++S     G   +   L   M   GL
Sbjct: 448 TGKVEDAWGLFCSLSLKGLKPDIVTYTTMMSGLCTKGLQHEVEALYTKMKQEGL 501



 Score =  124 bits (311), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 80/279 (28%), Positives = 141/279 (50%), Gaps = 6/279 (2%)

Query: 362 TYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQM 421
           TY+ ++    +  +     ++ ++MVR    P++VTY+ LI+     + ++EA  +F  M
Sbjct: 262 TYSALLDAFVKNGKVLEAKEIFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLM 321

Query: 422 QVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHL 481
              GC PD V+Y TLI+   KA  ++  M +++KM   GL  +T TY+ +I    + G +
Sbjct: 322 VSKGCFPDVVSYNTLINGFCKAKRVEDGMKLFRKMSQRGLVNNTVTYNTLIQGFFQVGDV 381

Query: 482 QAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIV 541
             A + F +M + G  P++ TYNI++         + AL ++ DMQ +  + D VTY+ V
Sbjct: 382 DKAQEFFSQMDSFGVSPDIWTYNILLGGLCDNGLLEKALVIFEDMQKSEMDLDIVTYTTV 441

Query: 542 MEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGL 601
           ++ +   G +++A  +F  +  K   PD   Y  ++      G   +    Y  M Q GL
Sbjct: 442 IQGMCKTGKVEDAWGLFCSLSLKGLKPDIVTYTTMMSGLCTKGLQHEVEALYTKMKQEGL 501

Query: 602 RPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSL 640
             N    +S+L   L  G ++ +  L++ ML+ G  PSL
Sbjct: 502 MKN----DSMLC--LGDGDITISAELIKKMLSCGYAPSL 534



 Score =  105 bits (262), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 84/329 (25%), Positives = 152/329 (46%), Gaps = 24/329 (7%)

Query: 400 RLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAA 459
           RL  +  R   L++A+++F++M      P  V +  L+    K    DV + + KKM+  
Sbjct: 55  RLSKTRLRDIKLHDAINLFREMVKTRPFPSIVDFNRLLSAIVKMKKYDVVISLGKKMEVL 114

Query: 460 GLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSA 519
           G+  D +T++++INC      +  A  +  +M+  G  P+ VT   ++    +      A
Sbjct: 115 GIRNDLYTFNIVINCFCCCFQVSLALSVLGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDA 174

Query: 520 LKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDL 579
           + L   M   G+ PD V Y+ +++ L     +++A   F E+ RK   P+   Y  LV+ 
Sbjct: 175 VSLVDKMVEIGYRPDIVAYNAIIDSLCKTRRVNDALDFFKEIGRKGIRPNVVTYTALVNG 234

Query: 580 WGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPS 639
              +G    A      M++  + PNV T ++LL AF++ G++ +A  + + M+ + + P 
Sbjct: 235 LCNSGRWNDAARLLRDMIKRKITPNVITYSALLDAFVKNGKVLEAKEIFEEMVRMSIDPD 294

Query: 640 LQTYTLLLSCCTEARSPYDMGFC-HELMAVSGHPAHMFLLSMPSPG--PDGQNVRDHVGS 696
           + TY+ L++           G C H+ +        MF L M S G  PD  +    +  
Sbjct: 295 IVTYSSLIN-----------GLCLHDRI---DEANQMFDL-MVSKGCFPDVVSYNTLING 339

Query: 697 FLEMMHSED------RESKRGLVDAVVDF 719
           F +    ED      + S+RGLV+  V +
Sbjct: 340 FCKAKRVEDGMKLFRKMSQRGLVNNTVTY 368



 Score = 63.5 bits (153), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 40/147 (27%), Positives = 67/147 (45%)

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
           Q G  ++  TY T++    +        +   QM   G  P++ TYN L+        L 
Sbjct: 358 QRGLVNNTVTYNTLIQGFFQVGDVDKAQEFFSQMDSFGVSPDIWTYNILLGGLCDNGLLE 417

Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
           +AL +F+ MQ    + D VTY T+I    K G ++ A  ++  +   GL PD  TY+ ++
Sbjct: 418 KALVIFEDMQKSEMDLDIVTYTTVIQGMCKTGKVEDAWGLFCSLSLKGLKPDIVTYTTMM 477

Query: 473 NCLGKAGHLQAAHQLFCEMVNQGCIPN 499
           + L   G       L+ +M  +G + N
Sbjct: 478 SGLCTKGLQHEVEALYTKMKQEGLMKN 504


>gi|168012346|ref|XP_001758863.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162690000|gb|EDQ76369.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 367

 Score =  149 bits (375), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 82/293 (27%), Positives = 152/293 (51%), Gaps = 1/293 (0%)

Query: 356 FKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEAL 415
            K + HTYT ++G+LGRA       +L D+M+  G +  + ++N +I +Y R     +A 
Sbjct: 6   LKPNGHTYTLVLGVLGRAGLTIQARELFDEMLSSGVEVGLHSFNSMIGAYARKGLFKKAW 65

Query: 416 DVFKQMQVVGCEPDRVTYCTLIDIHAKAGF-LDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
            +++ M   G + D +T  TL+    K    ++ A  ++ K++  G+ P   TY+ +++ 
Sbjct: 66  RMYEDMVESGIQADEITLSTLLSGVGKTQLPVETAEKIFSKIKENGILPRVETYNTLLSV 125

Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPD 534
           L + GH +   +L  EM     +PN++T+N ++ +  +    + A ++Y+ + +AG +P 
Sbjct: 126 LSRGGHTERCKELEIEMQRLEVVPNIITFNTLLMMHVQGGRLKEAAEVYQRILDAGLKPT 185

Query: 535 KVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYE 594
            VTY+ ++++        EA  VF EMRR    PD  +Y L++ ++GKAG+  +A   + 
Sbjct: 186 VVTYTGLVQMYCRASKHKEAIEVFLEMRRVGCKPDLMIYSLMISVYGKAGSAEEAALVFR 245

Query: 595 AMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
            +   G  PNV T   L+ AF   G++ +       ML  G  P L  Y +++
Sbjct: 246 QLQNDGYIPNVVTWCCLIQAFGWQGKMQEIGAFFNEMLASGCLPDLTLYNVMM 298



 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 80/295 (27%), Positives = 156/295 (52%), Gaps = 1/295 (0%)

Query: 353 QAGFKHDEHTYTTMVGILGRARQ-FGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           ++G + DE T +T++  +G+ +       K+  ++  +G  P V TYN L+    R  + 
Sbjct: 73  ESGIQADEITLSTLLSGVGKTQLPVETAEKIFSKIKENGILPRVETYNTLLSVLSRGGHT 132

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
               ++  +MQ +   P+ +T+ TL+ +H + G L  A ++Y+++  AGL P   TY+ +
Sbjct: 133 ERCKELEIEMQRLEVVPNIITFNTLLMMHVQGGRLKEAAEVYQRILDAGLKPTVVTYTGL 192

Query: 472 INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF 531
           +    +A   + A ++F EM   GC P+L+ Y++MI++  KA + + A  ++R +QN G+
Sbjct: 193 VQMYCRASKHKEAIEVFLEMRRVGCKPDLMIYSLMISVYGKAGSAEEAALVFRQLQNDGY 252

Query: 532 EPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWE 591
            P+ VT+  +++  G  G + E  A F EM     +PD  +Y +++  +G+ G+  +A  
Sbjct: 253 IPNVVTWCCLIQAFGWQGKMQEIGAFFNEMLASGCLPDLTLYNVMMGAYGRYGHSVQAAI 312

Query: 592 WYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLL 646
            +  M   G+ PN  + ++++ A+    Q +DA  +L  M   G  P   +  +L
Sbjct: 313 LFRRMQAQGISPNAVSYDTMIQAYCHSKQAADAQIVLDQMTRAGFSPDRSSRAML 367



 Score =  103 bits (258), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 57/193 (29%), Positives = 108/193 (55%), Gaps = 1/193 (0%)

Query: 456 MQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARN 515
           +Q   L P+  TY++++  LG+AG    A +LF EM++ G    L ++N MI   A+   
Sbjct: 1   VQKGRLKPNGHTYTLVLGVLGRAGLTIQARELFDEMLSSGVEVGLHSFNSMIGAYARKGL 60

Query: 516 YQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGY-LDEAEAVFAEMRRKNWVPDEPVYG 574
           ++ A ++Y DM  +G + D++T S ++  +G     ++ AE +F++++    +P    Y 
Sbjct: 61  FKKAWRMYEDMVESGIQADEITLSTLLSGVGKTQLPVETAEKIFSKIKENGILPRVETYN 120

Query: 575 LLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNL 634
            L+ +  + G+  +  E    M +  + PN+ T N+LL   ++ G+L +A  + Q +L+ 
Sbjct: 121 TLLSVLSRGGHTERCKELEIEMQRLEVVPNIITFNTLLMMHVQGGRLKEAAEVYQRILDA 180

Query: 635 GLKPSLQTYTLLL 647
           GLKP++ TYT L+
Sbjct: 181 GLKPTVVTYTGLV 193



 Score = 73.2 bits (178), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 45/160 (28%), Positives = 74/160 (46%), Gaps = 1/160 (0%)

Query: 340 HTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYN 399
           H  A+  F  +RR  G K D   Y+ M+ + G+A        +  Q+  DG  PNVVT+ 
Sbjct: 202 HKEAIEVFLEMRR-VGCKPDLMIYSLMISVYGKAGSAEEAALVFRQLQNDGYIPNVVTWC 260

Query: 400 RLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAA 459
            LI ++G    + E    F +M   GC PD   Y  ++  + + G    A  ++++MQA 
Sbjct: 261 CLIQAFGWQGKMQEIGAFFNEMLASGCLPDLTLYNVMMGAYGRYGHSVQAAILFRRMQAQ 320

Query: 460 GLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPN 499
           G+SP+  +Y  +I     +     A  +  +M   G  P+
Sbjct: 321 GISPNAVSYDTMIQAYCHSKQAADAQIVLDQMTRAGFSPD 360



 Score = 46.2 bits (108), Expect = 0.074,   Method: Compositional matrix adjust.
 Identities = 24/91 (26%), Positives = 49/91 (53%)

Query: 568 PDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHL 627
           P+   Y L++ + G+AG   +A E ++ ML +G+   + + NS++ A+ R G    A+ +
Sbjct: 8   PNGHTYTLVLGVLGRAGLTIQARELFDEMLSSGVEVGLHSFNSMIGAYARKGLFKKAWRM 67

Query: 628 LQGMLNLGLKPSLQTYTLLLSCCTEARSPYD 658
            + M+  G++    T + LLS   + + P +
Sbjct: 68  YEDMVESGIQADEITLSTLLSGVGKTQLPVE 98


>gi|255660842|gb|ACU25590.1| pentatricopeptide repeat-containing protein [Priva cordifolia]
          Length = 418

 Score =  149 bits (375), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 84/281 (29%), Positives = 150/281 (53%), Gaps = 4/281 (1%)

Query: 370 LGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPD 429
           L + + F  +     +++  G   ++  +N L+H + +   +  A  VF  +   G +P 
Sbjct: 111 LMKLKYFKLVWGFYKEILECGYPASLYFFNILMHRFCKEGEIRLAQLVFDAITKWGLKPS 170

Query: 430 RVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFC 489
            V++ TL++ + K G LD    +   M A+G  PD +TYSV+IN L K   +  AH+LF 
Sbjct: 171 VVSFNTLMNGYIKMGILDEGFRLKNAMHASGAQPDVYTYSVLINGLCKESKMDEAHELFD 230

Query: 490 EMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHC- 548
           EM+ +G +PN VT+  +I    K      A+++Y+ + + G  PD +TY+ +  + G C 
Sbjct: 231 EMLEKGLVPNGVTFTTLIDGHCKNGKLDLAMEIYKQILSQGLSPDLITYNTL--IYGFCK 288

Query: 549 -GYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPT 607
            G L +   +  EM  K   PD+  Y  L+D   K G++  A+E+ + M++  +R +   
Sbjct: 289 KGDLKQTRDLIDEMSMKGLKPDKITYTTLIDGSCKEGDLETAFEYRKKMIEENIRLDDVV 348

Query: 608 CNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
             +L+S   + G+  DA  +L+ ML++GLKP   TYT++++
Sbjct: 349 YTALISGLCKEGRSVDAEKMLREMLSVGLKPDSGTYTIVMN 389



 Score =  125 bits (313), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 82/316 (25%), Positives = 155/316 (49%), Gaps = 10/316 (3%)

Query: 335 KQLQDHTVALGFFNWL------RRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVR 388
           +++ DH + L +F  +        + G+    + +  ++    +  +      + D + +
Sbjct: 105 RKVLDHLMKLKYFKLVWGFYKEILECGYPASLYFFNILMHRFCKEGEIRLAQLVFDAITK 164

Query: 389 DGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDV 448
            G +P+VV++N L++ Y +   L+E   +   M   G +PD  TY  LI+   K   +D 
Sbjct: 165 WGLKPSVVSFNTLMNGYIKMGILDEGFRLKNAMHASGAQPDVYTYSVLINGLCKESKMDE 224

Query: 449 AMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIA 508
           A +++ +M   GL P+  T++ +I+   K G L  A +++ ++++QG  P+L+TYN +I 
Sbjct: 225 AHELFDEMLEKGLVPNGVTFTTLIDGHCKNGKLDLAMEIYKQILSQGLSPDLITYNTLIY 284

Query: 509 LQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHC--GYLDEAEAVFAEMRRKNW 566
              K  + +    L  +M   G +PDK+TY+ +++  G C  G L+ A     +M  +N 
Sbjct: 285 GFCKKGDLKQTRDLIDEMSMKGLKPDKITYTTLID--GSCKEGDLETAFEYRKKMIEENI 342

Query: 567 VPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYH 626
             D+ VY  L+    K G    A +    ML  GL+P+  T   +++ F + G ++    
Sbjct: 343 RLDDVVYTALISGLCKEGRSVDAEKMLREMLSVGLKPDSGTYTIVMNEFCKNGDVNTGSK 402

Query: 627 LLQGMLNLGLKPSLQT 642
           LL+ M   G  PS+ T
Sbjct: 403 LLKEMQRDGHVPSVVT 418



 Score =  109 bits (272), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 80/317 (25%), Positives = 141/317 (44%), Gaps = 19/317 (5%)

Query: 356 FKHDEHTYTTMVGILGRARQFGAINKLLDQMVR-----------------DGCQ-PNVVT 397
           F+H  H+Y TM+  L   +       L+  +V                   G Q  ++  
Sbjct: 9   FRHTLHSYCTMIHFLCTHQMLPEAKSLIQVIVSRKGKDSASAVFAAILETKGTQRSDIYV 68

Query: 398 YNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQ 457
           ++ LI +Y  + +L +AL+ F+  +         T   ++D   K  +  +    YK++ 
Sbjct: 69  FSGLITAYLESGFLRDALECFRLSREHKFWVPFDTCRKVLDHLMKLKYFKLVWGFYKEIL 128

Query: 458 AAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQ 517
             G     + ++++++   K G ++ A  +F  +   G  P++V++N ++    K     
Sbjct: 129 ECGYPASLYFFNILMHRFCKEGEIRLAQLVFDAITKWGLKPSVVSFNTLMNGYIKMGILD 188

Query: 518 SALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLV 577
              +L   M  +G +PD  TYS+++  L     +DEA  +F EM  K  VP+   +  L+
Sbjct: 189 EGFRLKNAMHASGAQPDVYTYSVLINGLCKESKMDEAHELFDEMLEKGLVPNGVTFTTLI 248

Query: 578 DLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLK 637
           D   K G +  A E Y+ +L  GL P++ T N+L+  F + G L     L+  M   GLK
Sbjct: 249 DGHCKNGKLDLAMEIYKQILSQGLSPDLITYNTLIYGFCKKGDLKQTRDLIDEMSMKGLK 308

Query: 638 PSLQTYTLLLS-CCTEA 653
           P   TYT L+   C E 
Sbjct: 309 PDKITYTTLIDGSCKEG 325


>gi|357499781|ref|XP_003620179.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495194|gb|AES76397.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 517

 Score =  149 bits (375), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 104/414 (25%), Positives = 198/414 (47%), Gaps = 17/414 (4%)

Query: 304 ILRQWKWGPLAE-----EALGNTNYSMDAY-QANQVLKQLQDHTVALGFFNWLRRQAGFK 357
           +L ++ + P+++     + L NT+++   Y   +       D   A+  FN L +Q    
Sbjct: 1   MLLRYGFVPVSKKFHSFQFLINTHFNFIPYFSTSTTFHNNNDVDDAVSLFNRLLQQNPTP 60

Query: 358 HDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDV 417
            +   +  ++G L +++ +  +  L  +M   G +PN+V  N LI+S+ +  ++  A  V
Sbjct: 61  PNIE-FNKILGSLVKSKHYHTVLYLSQKMEFRGIKPNLVNCNILINSFCQLGHIPSAFSV 119

Query: 418 FKQMQVVGCEPDRVTYCTLI----------DIHAKAGFLDVAMDMYKKMQAAGLSPDTFT 467
             ++  +G +P+ +T  TLI          D H   G L  A+D++ KM    ++PD +T
Sbjct: 120 LTKILKMGYKPNTITLNTLIKGLCLNGKIHDKHCIVGKLKDAVDLFNKMILENINPDVYT 179

Query: 468 YSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQ 527
           ++++++   K G ++ A  +   M+ QG  P +VTYN ++      +    A  ++  M 
Sbjct: 180 FTILVDGFCKEGRVKEAKNVLAMMMIQGIKPGVVTYNSLMDGYFLVKQVNKAKSIFNTMA 239

Query: 528 NAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVR 587
             G  PD  +YSI++        +DEA  +  EM  K  +P+   Y  L+D   K+G + 
Sbjct: 240 QLGVSPDIQSYSILINGFCKIKMMDEAMELLKEMHHKQIIPNVVTYSSLIDGLCKSGKIS 299

Query: 588 KAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
            A +  + M   G  PN+ T +S+L A  +  Q+ +A  LL  M N G++P++ TYT+L+
Sbjct: 300 YALKLVDEMHDRGQPPNIVTYSSILDALCKNHQVDNAIALLTQMKNQGIQPNMYTYTILI 359

Query: 648 SCCTEARSPYDMGFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMM 701
               ++    D     E + V GH  +++  ++   G   + + D   + L  M
Sbjct: 360 KGLCQSGKLEDARKVFEDLLVKGHNLNVYTYTVMIQGFCDKGLFDEALTLLSKM 413



 Score =  130 bits (326), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 83/290 (28%), Positives = 150/290 (51%), Gaps = 9/290 (3%)

Query: 358 HDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDV 417
           HD+H       I+G+ +   A++ L ++M+ +   P+V T+  L+  + +   + EA +V
Sbjct: 149 HDKHC------IVGKLKD--AVD-LFNKMILENINPDVYTFTILVDGFCKEGRVKEAKNV 199

Query: 418 FKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGK 477
              M + G +P  VTY +L+D +     ++ A  ++  M   G+SPD  +YS++IN   K
Sbjct: 200 LAMMMIQGIKPGVVTYNSLMDGYFLVKQVNKAKSIFNTMAQLGVSPDIQSYSILINGFCK 259

Query: 478 AGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVT 537
              +  A +L  EM ++  IPN+VTY+ +I    K+     ALKL  +M + G  P+ VT
Sbjct: 260 IKMMDEAMELLKEMHHKQIIPNVVTYSSLIDGLCKSGKISYALKLVDEMHDRGQPPNIVT 319

Query: 538 YSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAML 597
           YS +++ L     +D A A+  +M+ +   P+   Y +L+    ++G +  A + +E +L
Sbjct: 320 YSSILDALCKNHQVDNAIALLTQMKNQGIQPNMYTYTILIKGLCQSGKLEDARKVFEDLL 379

Query: 598 QAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
             G   NV T   ++  F   G   +A  LL  M + G  P+ +TY +++
Sbjct: 380 VKGHNLNVYTYTVMIQGFCDKGLFDEALTLLSKMEDNGCIPNAKTYEIII 429



 Score =  124 bits (311), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 83/300 (27%), Positives = 147/300 (49%), Gaps = 4/300 (1%)

Query: 333 VLKQLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQ 392
           ++ +L+D   A+  FN +  +     D +T+T +V    +  +      +L  M+  G +
Sbjct: 154 IVGKLKD---AVDLFNKMILE-NINPDVYTFTILVDGFCKEGRVKEAKNVLAMMMIQGIK 209

Query: 393 PNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDM 452
           P VVTYN L+  Y     +N+A  +F  M  +G  PD  +Y  LI+   K   +D AM++
Sbjct: 210 PGVVTYNSLMDGYFLVKQVNKAKSIFNTMAQLGVSPDIQSYSILINGFCKIKMMDEAMEL 269

Query: 453 YKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAK 512
            K+M    + P+  TYS +I+ L K+G +  A +L  EM ++G  PN+VTY+ ++    K
Sbjct: 270 LKEMHHKQIIPNVVTYSSLIDGLCKSGKISYALKLVDEMHDRGQPPNIVTYSSILDALCK 329

Query: 513 ARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPV 572
                +A+ L   M+N G +P+  TY+I+++ L   G L++A  VF ++  K    +   
Sbjct: 330 NHQVDNAIALLTQMKNQGIQPNMYTYTILIKGLCQSGKLEDARKVFEDLLVKGHNLNVYT 389

Query: 573 YGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGML 632
           Y +++  +   G   +A      M   G  PN  T   ++ +  +  +   A  LL  M+
Sbjct: 390 YTVMIQGFCDKGLFDEALTLLSKMEDNGCIPNAKTYEIIILSLFKKDENEMAEKLLCEMI 449



 Score =  108 bits (270), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 66/265 (24%), Positives = 126/265 (47%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           G K    TY +++      +Q      + + M + G  P++ +Y+ LI+ + +   ++EA
Sbjct: 207 GIKPGVVTYNSLMDGYFLVKQVNKAKSIFNTMAQLGVSPDIQSYSILINGFCKIKMMDEA 266

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
           +++ K+M      P+ VTY +LID   K+G +  A+ +  +M   G  P+  TYS I++ 
Sbjct: 267 MELLKEMHHKQIIPNVVTYSSLIDGLCKSGKISYALKLVDEMHDRGQPPNIVTYSSILDA 326

Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPD 534
           L K   +  A  L  +M NQG  PN+ TY I+I    ++   + A K++ D+   G   +
Sbjct: 327 LCKNHQVDNAIALLTQMKNQGIQPNMYTYTILIKGLCQSGKLEDARKVFEDLLVKGHNLN 386

Query: 535 KVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYE 594
             TY+++++     G  DEA  + ++M     +P+   Y +++    K      A +   
Sbjct: 387 VYTYTVMIQGFCDKGLFDEALTLLSKMEDNGCIPNAKTYEIIILSLFKKDENEMAEKLLC 446

Query: 595 AMLQAGLRPNVPTCNSLLSAFLRVG 619
            M++      V   N L+++    G
Sbjct: 447 EMIETNFDGRVALTNDLIASIWVTG 471



 Score = 96.7 bits (239), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 68/245 (27%), Positives = 122/245 (49%), Gaps = 7/245 (2%)

Query: 322 NYSMDAYQANQVLKQLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINK 381
           N  MD Y    ++KQ+     A   FN +  Q G   D  +Y+ ++    + +      +
Sbjct: 216 NSLMDGYF---LVKQVNK---AKSIFNTMA-QLGVSPDIQSYSILINGFCKIKMMDEAME 268

Query: 382 LLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHA 441
           LL +M      PNVVTY+ LI    ++  ++ AL +  +M   G  P+ VTY +++D   
Sbjct: 269 LLKEMHHKQIIPNVVTYSSLIDGLCKSGKISYALKLVDEMHDRGQPPNIVTYSSILDALC 328

Query: 442 KAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLV 501
           K   +D A+ +  +M+  G+ P+ +TY+++I  L ++G L+ A ++F +++ +G   N+ 
Sbjct: 329 KNHQVDNAIALLTQMKNQGIQPNMYTYTILIKGLCQSGKLEDARKVFEDLLVKGHNLNVY 388

Query: 502 TYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEM 561
           TY +MI        +  AL L   M++ G  P+  TY I++  L      + AE +  EM
Sbjct: 389 TYTVMIQGFCDKGLFDEALTLLSKMEDNGCIPNAKTYEIIILSLFKKDENEMAEKLLCEM 448

Query: 562 RRKNW 566
              N+
Sbjct: 449 IETNF 453


>gi|224111544|ref|XP_002315895.1| predicted protein [Populus trichocarpa]
 gi|222864935|gb|EEF02066.1| predicted protein [Populus trichocarpa]
          Length = 424

 Score =  149 bits (375), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 94/348 (27%), Positives = 170/348 (48%), Gaps = 4/348 (1%)

Query: 332 QVLKQLQDH-TVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDG 390
           + LK+L +   +AL FF W  +Q GF++   +Y  ++  LG+ +QF  I  L+  M + G
Sbjct: 10  EALKKLSNAGALALSFFRWAEKQKGFQYSTESYHALIESLGKIKQFNVIWNLVTDMKQKG 69

Query: 391 CQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAM 450
              N  T+  +   Y RA  + EA+D F +M+  G + +      L+D   K+  ++ A 
Sbjct: 70  LL-NKETFALISRRYARARKVKEAVDAFMKMEKFGLKIESSDVNRLLDTLCKSRQVERAQ 128

Query: 451 DMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQ 510
            ++ KM   G   D  +Y++++   G+  +L    +++ EM ++G  P++VTY I+I   
Sbjct: 129 LVFDKMNKRGFVADIKSYTILLEGWGQEKNLSRLMEVYNEMKDEGFEPDVVTYGILINAH 188

Query: 511 AKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDE 570
            K+R Y  A++L+ +M+    +P    Y  ++  LG    L EA   F   +   +VP+ 
Sbjct: 189 CKSRRYDDAIELFHEMEAKNCKPSPHIYCTLINGLGAEKRLSEALEFFELSKASGFVPEA 248

Query: 571 PVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQG 630
           P Y  +V  +  +  +       + M + G+ P+  T + +L   +R G+   AY + Q 
Sbjct: 249 PTYNAVVGAYCWSERMDDVQRTIDEMRKGGVGPSARTYDIILHHLIRAGKTKIAYSVFQK 308

Query: 631 MLNLGLKPSLQTYTLLLSC-CTEARSPYDMGFCHELMAVSGHPA-HMF 676
           M   G +PS+ TY +++   C E R    +    ++ A    P  HMF
Sbjct: 309 MSCEGCQPSVSTYEIIVRMFCNEDRVDMAIKVWDQMKAKGILPVMHMF 356



 Score =  119 bits (298), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 73/292 (25%), Positives = 137/292 (46%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           G K +      ++  L ++RQ      + D+M + G   ++ +Y  L+  +G+   L+  
Sbjct: 103 GLKIESSDVNRLLDTLCKSRQVERAQLVFDKMNKRGFVADIKSYTILLEGWGQEKNLSRL 162

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
           ++V+ +M+  G EPD VTY  LI+ H K+   D A++++ +M+A    P    Y  +IN 
Sbjct: 163 MEVYNEMKDEGFEPDVVTYGILINAHCKSRRYDDAIELFHEMEAKNCKPSPHIYCTLING 222

Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPD 534
           LG    L  A + F      G +P   TYN ++     +       +   +M+  G  P 
Sbjct: 223 LGAEKRLSEALEFFELSKASGFVPEAPTYNAVVGAYCWSERMDDVQRTIDEMRKGGVGPS 282

Query: 535 KVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYE 594
             TY I++  L   G    A +VF +M  +   P    Y ++V ++     V  A + ++
Sbjct: 283 ARTYDIILHHLIRAGKTKIAYSVFQKMSCEGCQPSVSTYEIIVRMFCNEDRVDMAIKVWD 342

Query: 595 AMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLL 646
            M   G+ P +   ++L+++     +L +A    Q ML++G++P  Q ++ L
Sbjct: 343 QMKAKGILPVMHMFSTLINSLCHESKLDEACMYFQEMLDVGIRPPAQLFSNL 394



 Score =  116 bits (290), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 80/337 (23%), Positives = 162/337 (48%), Gaps = 9/337 (2%)

Query: 284 LAPFSRHFASTGNVVESVSRILRQWKWGPLAEEALGNTNYSMDAYQANQVLKQLQDHTVA 343
            A  SR +A    V E+V   ++  K+G   E +  + N  +D      + K  Q     
Sbjct: 76  FALISRRYARARKVKEAVDAFMKMEKFGLKIESS--DVNRLLDT-----LCKSRQVERAQ 128

Query: 344 LGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIH 403
           L F    +R  GF  D  +YT ++   G+ +    + ++ ++M  +G +P+VVTY  LI+
Sbjct: 129 LVFDKMNKR--GFVADIKSYTILLEGWGQEKNLSRLMEVYNEMKDEGFEPDVVTYGILIN 186

Query: 404 SYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSP 463
           ++ ++   ++A+++F +M+   C+P    YCTLI+       L  A++ ++  +A+G  P
Sbjct: 187 AHCKSRRYDDAIELFHEMEAKNCKPSPHIYCTLINGLGAEKRLSEALEFFELSKASGFVP 246

Query: 464 DTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLY 523
           +  TY+ ++     +  +    +   EM   G  P+  TY+I++    +A   + A  ++
Sbjct: 247 EAPTYNAVVGAYCWSERMDDVQRTIDEMRKGGVGPSARTYDIILHHLIRAGKTKIAYSVF 306

Query: 524 RDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKA 583
           + M   G +P   TY I++ +  +   +D A  V+ +M+ K  +P   ++  L++     
Sbjct: 307 QKMSCEGCQPSVSTYEIIVRMFCNEDRVDMAIKVWDQMKAKGILPVMHMFSTLINSLCHE 366

Query: 584 GNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQ 620
             + +A  +++ ML  G+RP     ++L    L  G+
Sbjct: 367 SKLDEACMYFQEMLDVGIRPPAQLFSNLKQNLLDEGK 403


>gi|297738285|emb|CBI27486.3| unnamed protein product [Vitis vinifera]
          Length = 509

 Score =  149 bits (375), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 91/295 (30%), Positives = 143/295 (48%)

Query: 354 AGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNE 413
           AG K    TY  M+  L +         L  QM   G  P++VTYN LI  +G+   L+E
Sbjct: 50  AGIKRSVFTYNIMIDYLCKEGDLEMARSLFTQMKEAGFTPDIVTYNSLIDGHGKLGLLDE 109

Query: 414 ALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIIN 473
            + +F+QM+   C+PD +TY  LI+   K   +  A +   +M+A GL P+  TYS  I+
Sbjct: 110 CICIFEQMKDADCDPDVITYNALINCFCKFERMPKAFEFLHEMKANGLKPNVVTYSTFID 169

Query: 474 CLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEP 533
              K G LQ A + F +M      PN  TY  +I    KA N   ALKL  ++  AG + 
Sbjct: 170 AFCKEGMLQEAIKFFVDMRRVALTPNEFTYTSLIDANCKAGNLAEALKLVEEILQAGIKL 229

Query: 534 DKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWY 593
           + VTY+ +++ L   G + EAE VF  M      P++  Y  LV  + KA  +  A +  
Sbjct: 230 NVVTYTALLDGLCEEGRMKEAEEVFRAMLNAGVAPNQETYTALVHGFIKAKEMEYAKDIL 289

Query: 594 EAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
           + M +  ++P++    ++L       +L +A  L+  +   G+  +   YT L+ 
Sbjct: 290 KEMKEKCIKPDLLLYGTILWGLCNESRLEEAKLLIGEIKESGINTNAVIYTTLMD 344



 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 84/255 (32%), Positives = 134/255 (52%)

Query: 393 PNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDM 452
           P   + N L+H   +    + +   FK M   G +    TY  +ID   K G L++A  +
Sbjct: 19  PKPRSCNALLHRLSKVGRGDLSRKFFKDMGAAGIKRSVFTYNIMIDYLCKEGDLEMARSL 78

Query: 453 YKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAK 512
           + +M+ AG +PD  TY+ +I+  GK G L     +F +M +  C P+++TYN +I    K
Sbjct: 79  FTQMKEAGFTPDIVTYNSLIDGHGKLGLLDECICIFEQMKDADCDPDVITYNALINCFCK 138

Query: 513 ARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPV 572
                 A +   +M+  G +P+ VTYS  ++     G L EA   F +MRR    P+E  
Sbjct: 139 FERMPKAFEFLHEMKANGLKPNVVTYSTFIDAFCKEGMLQEAIKFFVDMRRVALTPNEFT 198

Query: 573 YGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGML 632
           Y  L+D   KAGN+ +A +  E +LQAG++ NV T  +LL      G++ +A  + + ML
Sbjct: 199 YTSLIDANCKAGNLAEALKLVEEILQAGIKLNVVTYTALLDGLCEEGRMKEAEEVFRAML 258

Query: 633 NLGLKPSLQTYTLLL 647
           N G+ P+ +TYT L+
Sbjct: 259 NAGVAPNQETYTALV 273



 Score =  146 bits (368), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 89/275 (32%), Positives = 139/275 (50%), Gaps = 1/275 (0%)

Query: 381 KLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIH 440
           K    M   G + +V TYN +I    +   L  A  +F QM+  G  PD VTY +LID H
Sbjct: 42  KFFKDMGAAGIKRSVFTYNIMIDYLCKEGDLEMARSLFTQMKEAGFTPDIVTYNSLIDGH 101

Query: 441 AKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNL 500
            K G LD  + ++++M+ A   PD  TY+ +INC  K   +  A +   EM   G  PN+
Sbjct: 102 GKLGLLDECICIFEQMKDADCDPDVITYNALINCFCKFERMPKAFEFLHEMKANGLKPNV 161

Query: 501 VTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAE 560
           VTY+  I    K    Q A+K + DM+     P++ TY+ +++     G L EA  +  E
Sbjct: 162 VTYSTFIDAFCKEGMLQEAIKFFVDMRRVALTPNEFTYTSLIDANCKAGNLAEALKLVEE 221

Query: 561 MRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQ 620
           + +     +   Y  L+D   + G +++A E + AML AG+ PN  T  +L+  F++  +
Sbjct: 222 ILQAGIKLNVVTYTALLDGLCEEGRMKEAEEVFRAMLNAGVAPNQETYTALVHGFIKAKE 281

Query: 621 LSDAYHLLQGMLNLGLKPSLQTY-TLLLSCCTEAR 654
           +  A  +L+ M    +KP L  Y T+L   C E+R
Sbjct: 282 MEYAKDILKEMKEKCIKPDLLLYGTILWGLCNESR 316



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 87/298 (29%), Positives = 154/298 (51%), Gaps = 5/298 (1%)

Query: 339 DHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTY 398
           D  +A   F  ++ +AGF  D  TY +++   G+         + +QM    C P+V+TY
Sbjct: 71  DLEMARSLFTQMK-EAGFTPDIVTYNSLIDGHGKLGLLDECICIFEQMKDADCDPDVITY 129

Query: 399 NRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQA 458
           N LI+ + +   + +A +   +M+  G +P+ VTY T ID   K G L  A+  +  M+ 
Sbjct: 130 NALINCFCKFERMPKAFEFLHEMKANGLKPNVVTYSTFIDAFCKEGMLQEAIKFFVDMRR 189

Query: 459 AGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQS 518
             L+P+ FTY+ +I+   KAG+L  A +L  E++  G   N+VTY  ++    +    + 
Sbjct: 190 VALTPNEFTYTSLIDANCKAGNLAEALKLVEEILQAGIKLNVVTYTALLDGLCEEGRMKE 249

Query: 519 ALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVD 578
           A +++R M NAG  P++ TY+ ++        ++ A+ +  EM+ K   PD  +YG +  
Sbjct: 250 AEEVFRAMLNAGVAPNQETYTALVHGFIKAKEMEYAKDILKEMKEKCIKPDLLLYGTI-- 307

Query: 579 LWGKAGNVR--KAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNL 634
           LWG     R  +A      + ++G+  N     +L+ A+ + GQ ++A  LL+ ML+L
Sbjct: 308 LWGLCNESRLEEAKLLIGEIKESGINTNAVIYTTLMDAYFKSGQATEALTLLEEMLDL 365



 Score =  130 bits (326), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 78/312 (25%), Positives = 152/312 (48%), Gaps = 23/312 (7%)

Query: 359 DEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVF 418
           D  TY  ++    +  +     + L +M  +G +PNVVTY+  I ++ +   L EA+  F
Sbjct: 125 DVITYNALINCFCKFERMPKAFEFLHEMKANGLKPNVVTYSTFIDAFCKEGMLQEAIKFF 184

Query: 419 KQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKA 478
             M+ V   P+  TY +LID + KAG L  A+ + +++  AG+  +  TY+ +++ L + 
Sbjct: 185 VDMRRVALTPNEFTYTSLIDANCKAGNLAEALKLVEEILQAGIKLNVVTYTALLDGLCEE 244

Query: 479 GHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTY 538
           G ++ A ++F  M+N G  PN  TY  ++    KA+  + A  + ++M+    +PD + Y
Sbjct: 245 GRMKEAEEVFRAMLNAGVAPNQETYTALVHGFIKAKEMEYAKDILKEMKEKCIKPDLLLY 304

Query: 539 SIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAW-------- 590
             ++  L +   L+EA+ +  E++      +  +Y  L+D + K+G   +A         
Sbjct: 305 GTILWGLCNESRLEEAKLLIGEIKESGINTNAVIYTTLMDAYFKSGQATEALTLLEEMLD 364

Query: 591 ---------------EWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLG 635
                          + ++ ML  G+ P+     +L+   ++ G L +A +L   M+ +G
Sbjct: 365 LVDGLCKNNCFEVAKKLFDEMLDKGMMPDKIAYTALIDGNMKHGNLQEALNLRDRMIEIG 424

Query: 636 LKPSLQTYTLLL 647
           ++  L  YT L+
Sbjct: 425 MELDLHAYTALI 436



 Score =  100 bits (249), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 83/335 (24%), Positives = 141/335 (42%), Gaps = 65/335 (19%)

Query: 325 MDAYQANQVLKQLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLD 384
           +DA+    +L++      A+ FF  +RR A    +E TYT+++    +A       KL++
Sbjct: 168 IDAFCKEGMLQE------AIKFFVDMRRVA-LTPNEFTYTSLIDANCKAGNLAEALKLVE 220

Query: 385 QMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAG 444
           ++++ G + NVVTY  L+        + EA +VF+ M   G  P++ TY  L+    KA 
Sbjct: 221 EILQAGIKLNVVTYTALLDGLCEEGRMKEAEEVFRAMLNAGVAPNQETYTALVHGFIKAK 280

Query: 445 FLDVAMDMYKKMQAAGLSPDTF-----------------------------------TYS 469
            ++ A D+ K+M+   + PD                                      Y+
Sbjct: 281 EMEYAKDILKEMKEKCIKPDLLLYGTILWGLCNESRLEEAKLLIGEIKESGINTNAVIYT 340

Query: 470 VIINCLGKAGH-----------------------LQAAHQLFCEMVNQGCIPNLVTYNIM 506
            +++   K+G                         + A +LF EM+++G +P+ + Y  +
Sbjct: 341 TLMDAYFKSGQATEALTLLEEMLDLVDGLCKNNCFEVAKKLFDEMLDKGMMPDKIAYTAL 400

Query: 507 IALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNW 566
           I    K  N Q AL L   M   G E D   Y+ ++  L H G + +A  +  EM  K  
Sbjct: 401 IDGNMKHGNLQEALNLRDRMIEIGMELDLHAYTALIWGLSHSGQVQKARNLLDEMIGKGV 460

Query: 567 VPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGL 601
           +PDE VY  L+  +   G V +A E    M + G+
Sbjct: 461 LPDEVVYMCLIKKYYALGKVDEALELQNEMAKRGM 495



 Score = 70.5 bits (171), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 56/237 (23%), Positives = 103/237 (43%), Gaps = 23/237 (9%)

Query: 354 AGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNE 413
           AG   ++ TYT +V    +A++      +L +M     +P+++ Y  ++      + L E
Sbjct: 260 AGVAPNQETYTALVHGFIKAKEMEYAKDILKEMKEKCIKPDLLLYGTILWGLCNESRLEE 319

Query: 414 ALDVFKQMQVVGCEPDRVTYCTLIDIHAKAG-----------------------FLDVAM 450
           A  +  +++  G   + V Y TL+D + K+G                         +VA 
Sbjct: 320 AKLLIGEIKESGINTNAVIYTTLMDAYFKSGQATEALTLLEEMLDLVDGLCKNNCFEVAK 379

Query: 451 DMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQ 510
            ++ +M   G+ PD   Y+ +I+   K G+LQ A  L   M+  G   +L  Y  +I   
Sbjct: 380 KLFDEMLDKGMMPDKIAYTALIDGNMKHGNLQEALNLRDRMIEIGMELDLHAYTALIWGL 439

Query: 511 AKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWV 567
           + +   Q A  L  +M   G  PD+V Y  +++     G +DEA  +  EM ++  +
Sbjct: 440 SHSGQVQKARNLLDEMIGKGVLPDEVVYMCLIKKYYALGKVDEALELQNEMAKRGMI 496



 Score = 53.5 bits (127), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 37/125 (29%), Positives = 57/125 (45%)

Query: 376 FGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCT 435
           F    KL D+M+  G  P+ + Y  LI    +   L EAL++  +M  +G E D   Y  
Sbjct: 375 FEVAKKLFDEMLDKGMMPDKIAYTALIDGNMKHGNLQEALNLRDRMIEIGMELDLHAYTA 434

Query: 436 LIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQG 495
           LI   + +G +  A ++  +M   G+ PD   Y  +I      G +  A +L  EM  +G
Sbjct: 435 LIWGLSHSGQVQKARNLLDEMIGKGVLPDEVVYMCLIKKYYALGKVDEALELQNEMAKRG 494

Query: 496 CIPNL 500
            I  L
Sbjct: 495 MITGL 499


>gi|255660780|gb|ACU25559.1| pentatricopeptide repeat-containing protein [Verbena macdougalii]
          Length = 418

 Score =  149 bits (375), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 84/279 (30%), Positives = 152/279 (54%)

Query: 370 LGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPD 429
           L + + F  +    ++ +  G   ++  +N L+HS+ +   +  A  VF  +      P 
Sbjct: 111 LMKLKYFKLVWGFYEESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPS 170

Query: 430 RVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFC 489
            V++ TL++ + K G LD    +   MQA+G+ PD +TYSV+IN L K   +  A++LF 
Sbjct: 171 VVSFNTLMNGYIKLGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFD 230

Query: 490 EMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCG 549
           EM++ G +PN VT+  +I    K      A+++Y+ M +    PD +TY+ ++  L   G
Sbjct: 231 EMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKG 290

Query: 550 YLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCN 609
            L +A+ +  EM  K   PD+  Y  L+D   K G++  A+E+ + M++  +R +     
Sbjct: 291 DLKQAQDLIDEMSMKGLKPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYT 350

Query: 610 SLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
           +L+S   + G+  DA  +L+ ML++GLKP + TYT++++
Sbjct: 351 ALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIIN 389



 Score =  121 bits (303), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 79/316 (25%), Positives = 154/316 (48%), Gaps = 10/316 (3%)

Query: 335 KQLQDHTVALGFFNWL------RRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVR 388
           +++ +H + L +F  +        + G+    + +  ++    +  +      + D + +
Sbjct: 105 RKVLEHLMKLKYFKLVWGFYEESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITK 164

Query: 389 DGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDV 448
              +P+VV++N L++ Y +   L+E   +   MQ  G +PD  TY  LI+   K   +D 
Sbjct: 165 WSLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDD 224

Query: 449 AMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIA 508
           A +++ +M   GL P+  T++ +I+   K G +  A +++ +M++Q   P+L+TYN +I 
Sbjct: 225 ANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIY 284

Query: 509 LQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHC--GYLDEAEAVFAEMRRKNW 566
              K  + + A  L  +M   G +PDK+TY+ +++  G+C  G L+ A      M ++N 
Sbjct: 285 GLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLID--GNCKEGDLETAFEYRKRMIKENI 342

Query: 567 VPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYH 626
             D+  Y  L+    + G    A +    ML  GL+P + T   +++ F + G +     
Sbjct: 343 RLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSK 402

Query: 627 LLQGMLNLGLKPSLQT 642
           LL+ M   G  PS+ T
Sbjct: 403 LLKEMQRDGCMPSVVT 418



 Score = 53.5 bits (127), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 33/139 (23%), Positives = 69/139 (49%), Gaps = 1/139 (0%)

Query: 517 QSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLL 576
           + A++ YR  +   F     T   V+E L    Y       + E     +      + +L
Sbjct: 83  RDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFYEESLECGYPASLYFFNIL 142

Query: 577 VDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGL 636
           +  + K G +R A   ++A+ +  LRP+V + N+L++ ++++G L + + L   M   G+
Sbjct: 143 MHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQASGV 202

Query: 637 KPSLQTYTLLLS-CCTEAR 654
           +P + TY++L++  C E++
Sbjct: 203 QPDVYTYSVLINGLCKESK 221


>gi|186495472|ref|NP_177628.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|133778904|gb|ABO38792.1| At1g74900 [Arabidopsis thaliana]
 gi|332197524|gb|AEE35645.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 453

 Score =  149 bits (375), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 100/331 (30%), Positives = 164/331 (49%), Gaps = 10/331 (3%)

Query: 330 ANQVLKQLQDH-TVALGFFNWL-RRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMV 387
            N VLK+L +H   AL FF++L      + HD  ++   + I  R      +  L+ +M 
Sbjct: 59  VNSVLKRLWNHGPKALQFFHFLDNHHREYVHDASSFDLAIDIAARLHLHPTVWSLIHRMR 118

Query: 388 RDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLD 447
                P+  T+  +   Y  A   ++A+ +F  M   GC  D  ++ T++D+  K+  ++
Sbjct: 119 SLRIGPSPKTFAIVAERYASAGKPDKAVKLFLNMHEHGCFQDLASFNTILDVLCKSKRVE 178

Query: 448 VAMDMYKKMQAAGLSPDTFTYSVIIN--CLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNI 505
            A ++++ ++    S DT TY+VI+N  CL K      A ++  EMV +G  PNL TYN 
Sbjct: 179 KAYELFRALRGR-FSVDTVTYNVILNGWCLIK--RTPKALEVLKEMVERGINPNLTTYNT 235

Query: 506 MIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKN 565
           M+    +A   + A + + +M+    E D VTY+ V+   G  G +  A  VF EM R+ 
Sbjct: 236 MLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIREG 295

Query: 566 WVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAY 625
            +P    Y  ++ +  K  NV  A   +E M++ G  PNV T N L+      G+ S   
Sbjct: 296 VLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGLFHAGEFSRGE 355

Query: 626 HLLQGMLNLGLKPSLQTYTLLL---SCCTEA 653
            L+Q M N G +P+ QTY +++   S C+E 
Sbjct: 356 ELMQRMENEGCEPNFQTYNMMIRYYSECSEV 386



 Score =  126 bits (317), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 70/266 (26%), Positives = 137/266 (51%), Gaps = 2/266 (0%)

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
           + G   D  ++ T++ +L ++++     +L  + +R     + VTYN +++ +       
Sbjct: 154 EHGCFQDLASFNTILDVLCKSKRVEKAYELF-RALRGRFSVDTVTYNVILNGWCLIKRTP 212

Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
           +AL+V K+M   G  P+  TY T++    +AG +  A + + +M+      D  TY+ ++
Sbjct: 213 KALEVLKEMVERGINPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVV 272

Query: 473 NCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFE 532
           +  G AG ++ A  +F EM+ +G +P++ TYN MI +  K  N ++A+ ++ +M   G+E
Sbjct: 273 HGFGVAGEIKRARNVFDEMIREGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRGYE 332

Query: 533 PDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEW 592
           P+  TY++++  L H G     E +   M  +   P+   Y +++  + +   V KA   
Sbjct: 333 PNVTTYNVLIRGLFHAGEFSRGEELMQRMENEGCEPNFQTYNMMIRYYSECSEVEKALGL 392

Query: 593 YEAMLQAGLRPNVPTCNSLLSA-FLR 617
           +E M      PN+ T N L+S  F+R
Sbjct: 393 FEKMGSGDCLPNLDTYNILISGMFVR 418


>gi|357111070|ref|XP_003557338.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g06920-like [Brachypodium distachyon]
          Length = 878

 Score =  149 bits (375), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 89/305 (29%), Positives = 155/305 (50%), Gaps = 2/305 (0%)

Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLI 402
           AL  F+ +++ A  K +  TY  ++ +L  A +     K+ D+M   G  PN+++ N ++
Sbjct: 370 ALTLFDVMKKDA--KPNISTYNIIIDMLCMAGRVNEAYKIRDEMELAGLFPNLLSVNIMV 427

Query: 403 HSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLS 462
               +AN L EA  +F+     GC P+ VTYC+LID   K G +D A  +++KM  AG  
Sbjct: 428 DRLCKANQLEEAHRIFESASERGCNPNSVTYCSLIDGLGKKGKIDDAYRLFEKMLDAGHD 487

Query: 463 PDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKL 522
            +   Y+ +I      G  +  H+++ EM+ +G  P+L   N  +    KA   +    +
Sbjct: 488 ANPIIYTSLIRNFFMHGRKEDGHKIYKEMIRRGGRPDLTLLNTYMDCVFKAGEVEKGRAI 547

Query: 523 YRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGK 582
           + DM++ GF PD  +YSI++  L   G   E   +F  M ++ +  D   Y  +VD   K
Sbjct: 548 FEDMKSFGFLPDVRSYSILIHGLTKAGQARETSNIFQAMSQQGFALDARAYNAVVDGLCK 607

Query: 583 AGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQT 642
           +G V KA+E  E M    + P V T  S++    ++ +L +AY L +   + G++ ++  
Sbjct: 608 SGKVDKAYEVLEEMKVKHVHPTVATYGSIVDGLAKIDRLDEAYMLFEEAKSKGIELNVIL 667

Query: 643 YTLLL 647
           Y+ L+
Sbjct: 668 YSSLI 672



 Score =  147 bits (372), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 111/417 (26%), Positives = 193/417 (46%), Gaps = 19/417 (4%)

Query: 335 KQLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPN 394
           ++L+D    +G    L+ +  F      YT ++G L  ARQ     +LL QM   G + +
Sbjct: 155 RRLEDAFRVIGAMRHLKFRPPFS----AYTVLIGALAEARQPERALELLRQMQDVGYEVS 210

Query: 395 VVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYK 454
           V  +  L+ +  R   +  AL +  +++    EPD V Y   ID   KAG +D+A   + 
Sbjct: 211 VPLFTTLVRALAREGQMEPALALVDEVKGSCLEPDIVLYNVCIDCFGKAGSVDMAWKFFH 270

Query: 455 KMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKAR 514
           +++A GL PD  +Y+ ++  L KAG L  A +LF +M  +  +P    YN MI     A 
Sbjct: 271 ELKAHGLRPDDVSYTSMVWVLCKAGRLGEAEELFGQMEAERDVPCAYAYNTMIMGYGSAE 330

Query: 515 NYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYG 574
            +  A KL   ++  G  P  V+++ ++  LG    +DEA  +F  M +K+  P+   Y 
Sbjct: 331 RFDDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALTLFDVM-KKDAKPNISTYN 389

Query: 575 LLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNL 634
           +++D+   AG V +A++  + M  AGL PN+ + N ++    +  QL +A+ + +     
Sbjct: 390 IIIDMLCMAGRVNEAYKIRDEMELAGLFPNLLSVNIMVDRLCKANQLEEAHRIFESASER 449

Query: 635 GLKPSLQTYTLLLSCCTEARSPYDMGFCHELMAVSGHPAHMFLLS-------MPSPGPDG 687
           G  P+  TY  L+    +     D     E M  +GH A+  + +       M     DG
Sbjct: 450 GCNPNSVTYCSLIDGLGKKGKIDDAYRLFEKMLDAGHDANPIIYTSLIRNFFMHGRKEDG 509

Query: 688 QNVRDHVGSFLEMMHSEDRESKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPD 744
             +      + EM+    R     L++  +D + K+G  E+  +++E        PD
Sbjct: 510 HKI------YKEMIRRGGR-PDLTLLNTYMDCVFKAGEVEKGRAIFEDMKSFGFLPD 559



 Score =  143 bits (360), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 106/448 (23%), Positives = 203/448 (45%), Gaps = 12/448 (2%)

Query: 342 VALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRL 401
           +A  FF+ L+   G + D+ +YT+MV +L +A + G   +L  QM  +   P    YN +
Sbjct: 264 MAWKFFHELKAH-GLRPDDVSYTSMVWVLCKAGRLGEAEELFGQMEAERDVPCAYAYNTM 322

Query: 402 IHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGL 461
           I  YG A   ++A  + ++++  GC P  V++ +++    K   +D A+ ++  M+    
Sbjct: 323 IMGYGSAERFDDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALTLFDVMKKDA- 381

Query: 462 SPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALK 521
            P+  TY++II+ L  AG +  A+++  EM   G  PNL++ NIM+    KA   + A +
Sbjct: 382 KPNISTYNIIIDMLCMAGRVNEAYKIRDEMELAGLFPNLLSVNIMVDRLCKANQLEEAHR 441

Query: 522 LYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWG 581
           ++      G  P+ VTY  +++ LG  G +D+A  +F +M       +  +Y  L+  + 
Sbjct: 442 IFESASERGCNPNSVTYCSLIDGLGKKGKIDDAYRLFEKMLDAGHDANPIIYTSLIRNFF 501

Query: 582 KAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQ 641
             G      + Y+ M++ G RP++   N+ +    + G++     + + M + G  P ++
Sbjct: 502 MHGRKEDGHKIYKEMIRRGGRPDLTLLNTYMDCVFKAGEVEKGRAIFEDMKSFGFLPDVR 561

Query: 642 TYTLLLSCCTEARSPYDMGFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMM 701
           +Y++L+   T+A    +     + M+  G        +    G       D     LE M
Sbjct: 562 SYSILIHGLTKAGQARETSNIFQAMSQQGFALDARAYNAVVDGLCKSGKVDKAYEVLEEM 621

Query: 702 HSEDRESKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAVKEKGMSYWLINLHVM 761
             +          ++VD L K    +EA  ++E A          K KG+   +I    +
Sbjct: 622 KVKHVHPTVATYGSIVDGLAKIDRLDEAYMLFEEA----------KSKGIELNVILYSSL 671

Query: 762 SDGTAVIALSRTLAWFRKQMLISGVGPS 789
            DG   +          ++M+  G+ P+
Sbjct: 672 IDGFGKVGRIDEAYLILEEMMKKGLTPN 699



 Score =  139 bits (351), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 115/450 (25%), Positives = 207/450 (46%), Gaps = 50/450 (11%)

Query: 329 QANQVLKQLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVR 388
           +A ++L+Q+QD               G++     +TT+V  L R  Q      L+D++  
Sbjct: 194 RALELLRQMQD--------------VGYEVSVPLFTTLVRALAREGQMEPALALVDEVKG 239

Query: 389 DGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDV 448
              +P++V YN  I  +G+A  ++ A   F +++  G  PD V+Y +++ +  KAG L  
Sbjct: 240 SCLEPDIVLYNVCIDCFGKAGSVDMAWKFFHELKAHGLRPDDVSYTSMVWVLCKAGRLGE 299

Query: 449 AMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIA 508
           A +++ +M+A    P  + Y+ +I   G A     A++L   +  +GCIP++V++N ++ 
Sbjct: 300 AEELFGQMEAERDVPCAYAYNTMIMGYGSAERFDDAYKLLERLRERGCIPSVVSFNSILT 359

Query: 509 LQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVP 568
              K R    AL L+ D+     +P+  TY+I++++L   G ++EA  +  EM      P
Sbjct: 360 CLGKKRKVDEALTLF-DVMKKDAKPNISTYNIIIDMLCMAGRVNEAYKIRDEMELAGLFP 418

Query: 569 DEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLL 628
           +     ++VD   KA  + +A   +E+  + G  PN  T  SL+    + G++ DAY L 
Sbjct: 419 NLLSVNIMVDRLCKANQLEEAHRIFESASERGCNPNSVTYCSLIDGLGKKGKIDDAYRLF 478

Query: 629 QGMLNLGLKPSLQTYT-LLLSCCTEARSPYDMGFCHELMAVSGHP------AHMFLLSMP 681
           + ML+ G   +   YT L+ +     R         E++   G P       +M  +   
Sbjct: 479 EKMLDAGHDANPIIYTSLIRNFFMHGRKEDGHKIYKEMIRRGGRPDLTLLNTYMDCVFKA 538

Query: 682 SPGPDGQNVRDHVGSF---------LEMMHS-----EDRE--------SKRGLV------ 713
                G+ + + + SF           ++H      + RE        S++G        
Sbjct: 539 GEVEKGRAIFEDMKSFGFLPDVRSYSILIHGLTKAGQARETSNIFQAMSQQGFALDARAY 598

Query: 714 DAVVDFLHKSGLKEEAGSVWEVAAQKNVYP 743
           +AVVD L KSG  ++A  V E    K+V+P
Sbjct: 599 NAVVDGLCKSGKVDKAYEVLEEMKVKHVHP 628



 Score =  136 bits (343), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 85/313 (27%), Positives = 154/313 (49%)

Query: 354 AGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNE 413
           AG   +  +   MV  L +A Q    +++ +     GC PN VTY  LI   G+   +++
Sbjct: 414 AGLFPNLLSVNIMVDRLCKANQLEEAHRIFESASERGCNPNSVTYCSLIDGLGKKGKIDD 473

Query: 414 ALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIIN 473
           A  +F++M   G + + + Y +LI      G  +    +YK+M   G  PD    +  ++
Sbjct: 474 AYRLFEKMLDAGHDANPIIYTSLIRNFFMHGRKEDGHKIYKEMIRRGGRPDLTLLNTYMD 533

Query: 474 CLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEP 533
           C+ KAG ++    +F +M + G +P++ +Y+I+I    KA   +    +++ M   GF  
Sbjct: 534 CVFKAGEVEKGRAIFEDMKSFGFLPDVRSYSILIHGLTKAGQARETSNIFQAMSQQGFAL 593

Query: 534 DKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWY 593
           D   Y+ V++ L   G +D+A  V  EM+ K+  P    YG +VD   K   + +A+  +
Sbjct: 594 DARAYNAVVDGLCKSGKVDKAYEVLEEMKVKHVHPTVATYGSIVDGLAKIDRLDEAYMLF 653

Query: 594 EAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEA 653
           E     G+  NV   +SL+  F +VG++ +AY +L+ M+  GL P++ T+  L+    + 
Sbjct: 654 EEAKSKGIELNVILYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLMDALVKT 713

Query: 654 RSPYDMGFCHELM 666
               +   C + M
Sbjct: 714 EEIDEALICFQSM 726



 Score =  131 bits (329), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 78/287 (27%), Positives = 142/287 (49%)

Query: 362 TYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQM 421
           TY +++  LG+  +     +L ++M+  G   N + Y  LI ++       +   ++K+M
Sbjct: 457 TYCSLIDGLGKKGKIDDAYRLFEKMLDAGHDANPIIYTSLIRNFFMHGRKEDGHKIYKEM 516

Query: 422 QVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHL 481
              G  PD     T +D   KAG ++    +++ M++ G  PD  +YS++I+ L KAG  
Sbjct: 517 IRRGGRPDLTLLNTYMDCVFKAGEVEKGRAIFEDMKSFGFLPDVRSYSILIHGLTKAGQA 576

Query: 482 QAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIV 541
           +    +F  M  QG   +   YN ++    K+     A ++  +M+     P   TY  +
Sbjct: 577 RETSNIFQAMSQQGFALDARAYNAVVDGLCKSGKVDKAYEVLEEMKVKHVHPTVATYGSI 636

Query: 542 MEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGL 601
           ++ L     LDEA  +F E + K    +  +Y  L+D +GK G + +A+   E M++ GL
Sbjct: 637 VDGLAKIDRLDEAYMLFEEAKSKGIELNVILYSSLIDGFGKVGRIDEAYLILEEMMKKGL 696

Query: 602 RPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
            PNV T NSL+ A ++  ++ +A    Q M  +   P+  TY++L++
Sbjct: 697 TPNVYTWNSLMDALVKTEEIDEALICFQSMKEMKCSPNTYTYSILIN 743



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 75/272 (27%), Positives = 133/272 (48%)

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
           Q GF  D   Y  +V  L ++ +     ++L++M      P V TY  ++    + + L+
Sbjct: 588 QQGFALDARAYNAVVDGLCKSGKVDKAYEVLEEMKVKHVHPTVATYGSIVDGLAKIDRLD 647

Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
           EA  +F++ +  G E + + Y +LID   K G +D A  + ++M   GL+P+ +T++ ++
Sbjct: 648 EAYMLFEEAKSKGIELNVILYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLM 707

Query: 473 NCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFE 532
           + L K   +  A   F  M    C PN  TY+I+I    + + Y  A   +++MQ  G  
Sbjct: 708 DALVKTEEIDEALICFQSMKEMKCSPNTYTYSILINGLCRVQKYNKAFVFWQEMQKQGLI 767

Query: 533 PDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEW 592
           P+ VTY+ ++  L   G + +A ++F   +    +PD   +  L++    A    +A++ 
Sbjct: 768 PNVVTYTTMISGLAKVGNITDAYSLFERFKTNGGIPDSASFNALIEGMSNANRPMEAYQV 827

Query: 593 YEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDA 624
           +E     G R NV TC SLL A  +   L  A
Sbjct: 828 FEETRLRGCRLNVKTCISLLDALNKTECLEQA 859



 Score =  118 bits (295), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 79/298 (26%), Positives = 139/298 (46%), Gaps = 3/298 (1%)

Query: 361 HTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQ 420
           +TY   V   G   +  AI    + M   G  P+V +Y+ LIH   +A    E  ++F+ 
Sbjct: 529 NTYMDCVFKAGEVEKGRAI---FEDMKSFGFLPDVRSYSILIHGLTKAGQARETSNIFQA 585

Query: 421 MQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGH 480
           M   G   D   Y  ++D   K+G +D A ++ ++M+   + P   TY  I++ L K   
Sbjct: 586 MSQQGFALDARAYNAVVDGLCKSGKVDKAYEVLEEMKVKHVHPTVATYGSIVDGLAKIDR 645

Query: 481 LQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSI 540
           L  A+ LF E  ++G   N++ Y+ +I    K      A  +  +M   G  P+  T++ 
Sbjct: 646 LDEAYMLFEEAKSKGIELNVILYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNS 705

Query: 541 VMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAG 600
           +M+ L     +DEA   F  M+     P+   Y +L++   +     KA+ +++ M + G
Sbjct: 706 LMDALVKTEEIDEALICFQSMKEMKCSPNTYTYSILINGLCRVQKYNKAFVFWQEMQKQG 765

Query: 601 LRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYD 658
           L PNV T  +++S   +VG ++DAY L +     G  P   ++  L+   + A  P +
Sbjct: 766 LIPNVVTYTTMISGLAKVGNITDAYSLFERFKTNGGIPDSASFNALIEGMSNANRPME 823



 Score =  116 bits (290), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 73/316 (23%), Positives = 148/316 (46%), Gaps = 7/316 (2%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           GF  D  +Y+ ++  L +A Q    + +   M + G   +   YN ++    ++  +++A
Sbjct: 555 GFLPDVRSYSILIHGLTKAGQARETSNIFQAMSQQGFALDARAYNAVVDGLCKSGKVDKA 614

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
            +V ++M+V    P   TY +++D  AK   LD A  ++++ ++ G+  +   YS +I+ 
Sbjct: 615 YEVLEEMKVKHVHPTVATYGSIVDGLAKIDRLDEAYMLFEEAKSKGIELNVILYSSLIDG 674

Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPD 534
            GK G +  A+ +  EM+ +G  PN+ T+N ++    K      AL  ++ M+     P+
Sbjct: 675 FGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLMDALVKTEEIDEALICFQSMKEMKCSPN 734

Query: 535 KVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYE 594
             TYSI++  L      ++A   + EM+++  +P+   Y  ++    K GN+  A+  +E
Sbjct: 735 TYTYSILINGLCRVQKYNKAFVFWQEMQKQGLIPNVVTYTTMISGLAKVGNITDAYSLFE 794

Query: 595 AMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEAR 654
                G  P+  + N+L+       +  +AY + +     G + +++T   LL    +  
Sbjct: 795 RFKTNGGIPDSASFNALIEGMSNANRPMEAYQVFEETRLRGCRLNVKTCISLLDALNKTE 854

Query: 655 SPYDMGFCHELMAVSG 670
                  C E  A+ G
Sbjct: 855 -------CLEQAAIVG 863



 Score =  105 bits (263), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 95/417 (22%), Positives = 180/417 (43%), Gaps = 44/417 (10%)

Query: 333 VLKQLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQ 392
           VL+ L++ ++A  FF      +        Y  ++  L  +    A+ K+L++M   G  
Sbjct: 81  VLRSLKNPSLAAPFFLLASASSSQPLPPDAYNAVLPFL--SHDLAALEKVLEEMSHLGYG 138

Query: 393 PNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDM 452
                   L+ +  R+  L +A  V   M+ +   P    Y  LI   A+A   + A+++
Sbjct: 139 LPNPACAALVATLVRSRRLEDAFRVIGAMRHLKFRPPFSAYTVLIGALAEARQPERALEL 198

Query: 453 YKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAK 512
            ++MQ  G       ++ ++  L + G ++ A  L  E+      P++V YN+ I    K
Sbjct: 199 LRQMQDVGYEVSVPLFTTLVRALAREGQMEPALALVDEVKGSCLEPDIVLYNVCIDCFGK 258

Query: 513 ARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPV 572
           A +   A K + +++  G  PD V+Y+ ++ VL   G L EAE +F +M  +  VP    
Sbjct: 259 AGSVDMAWKFFHELKAHGLRPDDVSYTSMVWVLCKAGRLGEAEELFGQMEAERDVPCAYA 318

Query: 573 YGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGML 632
           Y  ++  +G A     A++  E + + G  P+V + NS+L+   +  ++ +A  L   M 
Sbjct: 319 YNTMIMGYGSAERFDDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALTLFDVM- 377

Query: 633 NLGLKPSLQTYTLLLSCCTEARSPYDMGFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRD 692
               KP++ TY +++                             +L M     +   +RD
Sbjct: 378 KKDAKPNISTYNIIID----------------------------MLCMAGRVNEAYKIRD 409

Query: 693 HV---GSFLEMMHSEDRESKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAV 746
            +   G F  ++           V+ +VD L K+   EEA  ++E A+++   P++V
Sbjct: 410 EMELAGLFPNLLS----------VNIMVDRLCKANQLEEAHRIFESASERGCNPNSV 456



 Score = 89.7 bits (221), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 52/208 (25%), Positives = 105/208 (50%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           +  G + +   Y++++   G+  +      +L++M++ G  PNV T+N L+ +  +   +
Sbjct: 657 KSKGIELNVILYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLMDALVKTEEI 716

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
           +EAL  F+ M+ + C P+  TY  LI+   +    + A   +++MQ  GL P+  TY+ +
Sbjct: 717 DEALICFQSMKEMKCSPNTYTYSILINGLCRVQKYNKAFVFWQEMQKQGLIPNVVTYTTM 776

Query: 472 INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF 531
           I+ L K G++  A+ LF      G IP+  ++N +I   + A     A +++ + +  G 
Sbjct: 777 ISGLAKVGNITDAYSLFERFKTNGGIPDSASFNALIEGMSNANRPMEAYQVFEETRLRGC 836

Query: 532 EPDKVTYSIVMEVLGHCGYLDEAEAVFA 559
             +  T   +++ L     L++A  V A
Sbjct: 837 RLNVKTCISLLDALNKTECLEQAAIVGA 864


>gi|147780655|emb|CAN66818.1| hypothetical protein VITISV_004776 [Vitis vinifera]
          Length = 1037

 Score =  149 bits (375), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 130/503 (25%), Positives = 220/503 (43%), Gaps = 72/503 (14%)

Query: 317 ALGNTNYSMDAYQANQVLKQLQ-DHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQ 375
           A+   N+       + VL+ L+ + T +LGFF ++ +Q  F+ +  +Y  +V IL R R 
Sbjct: 58  AISKLNFVFSDDIVDAVLRNLRLNPTASLGFFQFVSKQQNFRPNVKSYCKLVHILSRGRM 117

Query: 376 FGAINKLLDQMVRDGCQ----PNVV----------------TYNRLIHSYGRANYLNEAL 415
           +      L+Q+V D C+     NV+                 ++ ++  Y        AL
Sbjct: 118 YDETRAYLNQLV-DLCKFKDRGNVIWDELVGVYREFAFSPTVFDMILKVYVEKGLTKNAL 176

Query: 416 DVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCL 475
            VF  M   G  P   +  +L++   K G    A  +Y++M   G+ PD F  S+++N  
Sbjct: 177 YVFDNMGKCGRIPSLRSCNSLLNNLVKNGETHTAHYVYQQMIRVGIVPDVFMVSIMVNAF 236

Query: 476 GKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDK 535
            K G +  A     +M N G  PN+VTY+ +I       + ++A  + + M   G   + 
Sbjct: 237 CKDGKVDEAAGFVKKMENLGVEPNIVTYHSLINGYVSLGDVEAAKGVLKFMSEKGVSRNV 296

Query: 536 VTYSIVMEVLGHCGY--LDEAEAVFAEMRRK-NWVPDEPVYGLLVDLWGKAGNVRKAWEW 592
           VTY+++++  G+C    +DEAE V   M+ +   VPDE  YG+L+D + + G +  A   
Sbjct: 297 VTYTLLIK--GYCKQCKMDEAEKVLRGMQEEAALVPDERAYGVLIDGYCRTGKIDDAVRL 354

Query: 593 YEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTE 652
            + ML+ GL+ N+  CNSL++ + + G++ +A  ++  M++  LKP   +Y  LL     
Sbjct: 355 LDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMVDWNLKPDSYSYNTLLD---- 410

Query: 653 ARSPYDMGFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRESKRGL 712
                  G+C E     GH +  F                   +  + M  E  E     
Sbjct: 411 -------GYCRE-----GHTSEAF-------------------NLCDKMLQEGIEPTVLT 439

Query: 713 VDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAVKEKGMSYWLINLHVMSDGTAVIALSR 772
            + ++  L + G  ++A  +W +  +  V PD V   G S  L  L  M +      L  
Sbjct: 440 YNTLLKGLCRVGAFDDALQIWHLMMKXGVAPDEV---GYSTLLDGLFKMENFEGASTL-- 494

Query: 773 TLAWFRKQMLISGVGPSRIDIVT 795
              W  K +L  G   SRI   T
Sbjct: 495 ---W--KDILARGFTKSRITFNT 512



 Score =  145 bits (365), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 136/570 (23%), Positives = 233/570 (40%), Gaps = 66/570 (11%)

Query: 265 ECVSERFSKPSREMKIPAGLAPFSRHFA-------STGNVVESVSRILRQWKWGPLAEEA 317
           +C  +   K  R M+  A L P  R +         TG + ++V  +    + G      
Sbjct: 309 QCKMDEAEKVLRGMQEEAALVPDERAYGVLIDGYCRTGKIDDAVRLLDEMLRLGL----- 363

Query: 318 LGNTNYSMDAYQANQVLKQLQDHT---VALGFFNWLRRQAGFKHDEHTYTTMVGILGRAR 374
              TN  +     N   K+ + H    V     +W       K D ++Y T++    R  
Sbjct: 364 --KTNLFICNSLINGYCKRGEIHEAEGVITRMVDW-----NLKPDSYSYNTLLDGYCREG 416

Query: 375 QFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYC 434
                  L D+M+++G +P V+TYN L+    R    ++AL ++  M   G  PD V Y 
Sbjct: 417 HTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKXGVAPDEVGYS 476

Query: 435 TLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQ 494
           TL+D   K    + A  ++K + A G +    T++ +I+ L K G +  A ++F +M + 
Sbjct: 477 TLLDGLFKMENFEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDL 536

Query: 495 GCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEA 554
           GC P+ +TY  +I    KA N   A K+   M+     P    Y+ ++  L     L E 
Sbjct: 537 GCSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREXISPSIEMYNSLISGLFKSRRLVEX 596

Query: 555 EAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSA 614
             +  EM  +   P+   YG L+D W K G + KA+  Y  M + GL  N+  C++++S 
Sbjct: 597 TDLLTEMGIRGLTPNIVTYGALIDGWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVSG 656

Query: 615 FLRVGQLSDAYHLLQGMLNLGLKPSLQTYTL--------------LLSCCTEARSPYDM- 659
             R+G++ +A  L+Q M++ G  P  + +                L   C     P ++ 
Sbjct: 657 LYRLGRIDEANLLMQKMVDHGFFPDHECFLKSDIRYAAIQKIADSLDESCKTFLLPNNIV 716

Query: 660 ------GFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHV------GSFLEMMHSEDRE 707
                 G C +   V        +LS+    PD       +      G+  E     D  
Sbjct: 717 YNIAIAGLC-KTGKVDDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEM 775

Query: 708 SKRGLV------DAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAVKEKGMSYWLINLHVM 761
            +RGLV      +A+++ L KS   + A  ++    QK ++P+ V            + +
Sbjct: 776 LRRGLVPNIVTYNALINGLCKSENVDRAQRLFHKLHQKGLFPNVV----------TYNTL 825

Query: 762 SDGTAVIALSRTLAWFRKQMLISGVGPSRI 791
            DG   I         + +M+  G+ PS +
Sbjct: 826 IDGYCKIGNMDAAFKLKDKMIEEGISPSVV 855



 Score =  139 bits (351), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 94/329 (28%), Positives = 148/329 (44%), Gaps = 32/329 (9%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           +  G   D  TY T++    +A   G   K+   M R+   P++  YN LI    ++  L
Sbjct: 534 KDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREXISPSIEMYNSLISGLFKSRRL 593

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
            E  D+  +M + G  P+ VTY  LID   K G LD A   Y +M   GLS +    S +
Sbjct: 594 VEXTDLLTEMGIRGLTPNIVTYGALIDGWCKEGMLDKAFSSYFEMTENGLSANIIICSTM 653

Query: 472 INCLGKAGHLQAAHQLFCEMVNQG--------------------------------CIPN 499
           ++ L + G +  A+ L  +MV+ G                                 +PN
Sbjct: 654 VSGLYRLGRIDEANLLMQKMVDHGFFPDHECFLKSDIRYAAIQKIADSLDESCKTFLLPN 713

Query: 500 LVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFA 559
            + YNI IA   K      A + +  +   GF PD  TY  ++      G +DEA  +  
Sbjct: 714 NIVYNIAIAGLCKTGKVDDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRD 773

Query: 560 EMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVG 619
           EM R+  VP+   Y  L++   K+ NV +A   +  + Q GL PNV T N+L+  + ++G
Sbjct: 774 EMLRRGLVPNIVTYNALINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCKIG 833

Query: 620 QLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
            +  A+ L   M+  G+ PS+ TY+ L++
Sbjct: 834 NMDAAFKLKDKMIEEGISPSVVTYSALIN 862



 Score =  109 bits (273), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 78/317 (24%), Positives = 143/317 (45%), Gaps = 32/317 (10%)

Query: 363 YTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQ 422
           Y +++  L ++R+      LL +M   G  PN+VTY  LI  + +   L++A   + +M 
Sbjct: 580 YNSLISGLFKSRRLVEXTDLLTEMGIRGLTPNIVTYGALIDGWCKEGMLDKAFSSYFEMT 639

Query: 423 VVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPD------------------ 464
             G   + +   T++    + G +D A  + +KM   G  PD                  
Sbjct: 640 ENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGFFPDHECFLKSDIRYAAIQKIA 699

Query: 465 --------TF------TYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQ 510
                   TF       Y++ I  L K G +  A + F  +  +G +P+  TY  +I   
Sbjct: 700 DSLDESCKTFLLPNNIVYNIAIAGLCKTGKVDDARRFFSMLSLKGFVPDNFTYCTLIHGY 759

Query: 511 AKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDE 570
           + A N   A +L  +M   G  P+ VTY+ ++  L     +D A+ +F ++ +K   P+ 
Sbjct: 760 SAAGNVDEAFRLRDEMLRRGLVPNIVTYNALINGLCKSENVDRAQRLFHKLHQKGLFPNV 819

Query: 571 PVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQG 630
             Y  L+D + K GN+  A++  + M++ G+ P+V T ++L++   + G +  +  LL  
Sbjct: 820 VTYNTLIDGYCKIGNMDAAFKLKDKMIEEGISPSVVTYSALINGLCKHGDIERSMKLLNQ 879

Query: 631 MLNLGLKPSLQTYTLLL 647
           M+  G+   L  Y  L+
Sbjct: 880 MIKAGVDSKLIEYCTLV 896



 Score =  108 bits (271), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 85/347 (24%), Positives = 157/347 (45%), Gaps = 37/347 (10%)

Query: 337 LQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQ-PNV 395
           L D   A G   ++  + G   +  TYT ++    +  +     K+L  M  +    P+ 
Sbjct: 274 LGDVEAAKGVLKFMS-EKGVSRNVVTYTLLIKGYCKQCKMDEAEKVLRGMQEEAALVPDE 332

Query: 396 VTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKK 455
             Y  LI  Y R   +++A+ +  +M  +G + +     +LI+ + K G +  A  +  +
Sbjct: 333 RAYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITR 392

Query: 456 MQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMI-------- 507
           M    L PD+++Y+ +++   + GH   A  L  +M+ +G  P ++TYN ++        
Sbjct: 393 MVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGA 452

Query: 508 ---ALQA------------------------KARNYQSALKLYRDMQNAGFEPDKVTYSI 540
              ALQ                         K  N++ A  L++D+   GF   ++T++ 
Sbjct: 453 FDDALQIWHLMMKXGVAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTKSRITFNT 512

Query: 541 VMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAG 600
           ++  L   G + EAE +F +M+     PD   Y  L+D + KA NV +A++   AM +  
Sbjct: 513 MISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREX 572

Query: 601 LRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
           + P++   NSL+S   +  +L +   LL  M   GL P++ TY  L+
Sbjct: 573 ISPSIEMYNSLISGLFKSRRLVEXTDLLTEMGIRGLTPNIVTYGALI 619



 Score =  101 bits (252), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 69/236 (29%), Positives = 113/236 (47%), Gaps = 23/236 (9%)

Query: 329 QANQVLKQLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKL---LDQ 385
           +AN +++++ DH              GF  D   +      L    ++ AI K+   LD+
Sbjct: 665 EANLLMQKMVDH--------------GFFPDHECF------LKSDIRYAAIQKIADSLDE 704

Query: 386 MVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGF 445
             +    PN + YN  I    +   +++A   F  + + G  PD  TYCTLI  ++ AG 
Sbjct: 705 SCKTFLLPNNIVYNIAIAGLCKTGKVDDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGN 764

Query: 446 LDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNI 505
           +D A  +  +M   GL P+  TY+ +IN L K+ ++  A +LF ++  +G  PN+VTYN 
Sbjct: 765 VDEAFRLRDEMLRRGLVPNIVTYNALINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNT 824

Query: 506 MIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEM 561
           +I    K  N  +A KL   M   G  P  VTYS ++  L   G ++ +  +  +M
Sbjct: 825 LIDGYCKIGNMDAAFKLKDKMIEEGISPSVVTYSALINGLCKHGDIERSMKLLNQM 880



 Score =  100 bits (249), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 60/176 (34%), Positives = 91/176 (51%), Gaps = 1/176 (0%)

Query: 346 FFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSY 405
           FF+ L  + GF  D  TY T++     A       +L D+M+R G  PN+VTYN LI+  
Sbjct: 736 FFSMLSLK-GFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNALINGL 794

Query: 406 GRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDT 465
            ++  ++ A  +F ++   G  P+ VTY TLID + K G +D A  +  KM   G+SP  
Sbjct: 795 CKSENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKDKMIEEGISPSV 854

Query: 466 FTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALK 521
            TYS +IN L K G ++ + +L  +M+  G    L+ Y  ++    K  NY    K
Sbjct: 855 VTYSALINGLCKHGDIERSMKLLNQMIKAGVDSKLIEYCTLVQGGFKTSNYNEMSK 910



 Score = 82.4 bits (202), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 50/182 (27%), Positives = 90/182 (49%)

Query: 362 TYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQM 421
            Y   +  L +  +     +    +   G  P+  TY  LIH Y  A  ++EA  +  +M
Sbjct: 716 VYNIAIAGLCKTGKVDDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEM 775

Query: 422 QVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHL 481
              G  P+ VTY  LI+   K+  +D A  ++ K+   GL P+  TY+ +I+   K G++
Sbjct: 776 LRRGLVPNIVTYNALINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCKIGNM 835

Query: 482 QAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIV 541
            AA +L  +M+ +G  P++VTY+ +I    K  + + ++KL   M  AG +   + Y  +
Sbjct: 836 DAAFKLKDKMIEEGISPSVVTYSALINGLCKHGDIERSMKLLNQMIKAGVDSKLIEYCTL 895

Query: 542 ME 543
           ++
Sbjct: 896 VQ 897


>gi|414590400|tpg|DAA40971.1| TPA: hypothetical protein ZEAMMB73_404079 [Zea mays]
          Length = 745

 Score =  149 bits (375), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 93/312 (29%), Positives = 153/312 (49%)

Query: 359 DEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVF 418
           DE  YTT++          +  +  D+M R G   + VTY  +I+   RA  L EA  + 
Sbjct: 360 DEALYTTVLSGFCNKGDLVSARRWFDEMQRKGLATDGVTYTTMINGLCRAVELEEAEKLL 419

Query: 419 KQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKA 478
           ++M     + D VTY  LID + K G +  A  M+  M   G++P+  TY+ + + L K 
Sbjct: 420 QEMWARRLDVDEVTYTVLIDGYCKRGKMAEAFQMHNAMVQRGVTPNVVTYTALTDGLCKQ 479

Query: 479 GHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTY 538
           G +QAA++L  EM N+G   N  TYN +I    KA   + A++   DM  A  +PD  TY
Sbjct: 480 GDVQAANELLHEMSNKGLELNACTYNSLINGLCKAGYLEQAMRTMADMDTACLKPDVYTY 539

Query: 539 SIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQ 598
           + +++ L   G LD A ++  EM  K   P    Y +L++ +  +G V    +  + ML+
Sbjct: 540 TTLIDALCKSGDLDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKKLLDWMLE 599

Query: 599 AGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYD 658
             + PN  T NSL+  +     +     + +GM +  + P+  TY +L+    +AR+  +
Sbjct: 600 KNIHPNAATYNSLMKQYCIENNMKSTTEIYKGMRSRDVGPNENTYNILIKGHCKARNMKE 659

Query: 659 MGFCHELMAVSG 670
             + H+ M   G
Sbjct: 660 ALYFHDEMIQKG 671



 Score =  134 bits (338), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 88/322 (27%), Positives = 149/322 (46%), Gaps = 4/322 (1%)

Query: 349 WLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRA 408
           W RR      DE TYT ++    +  +     ++ + MV+ G  PNVVTY  L     + 
Sbjct: 423 WARR---LDVDEVTYTVLIDGYCKRGKMAEAFQMHNAMVQRGVTPNVVTYTALTDGLCKQ 479

Query: 409 NYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTY 468
             +  A ++  +M   G E +  TY +LI+   KAG+L+ AM     M  A L PD +TY
Sbjct: 480 GDVQAANELLHEMSNKGLELNACTYNSLINGLCKAGYLEQAMRTMADMDTACLKPDVYTY 539

Query: 469 SVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQN 528
           + +I+ L K+G L  AH L  EM+++G  P +VTYN+++     +   +   KL   M  
Sbjct: 540 TTLIDALCKSGDLDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKKLLDWMLE 599

Query: 529 AGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRK 588
               P+  TY+ +M+       +     ++  MR ++  P+E  Y +L+    KA N+++
Sbjct: 600 KNIHPNAATYNSLMKQYCIENNMKSTTEIYKGMRSRDVGPNENTYNILIKGHCKARNMKE 659

Query: 589 AWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
           A  +++ M+Q G R    + ++L+    +  +  +A  L   M   GL      Y   + 
Sbjct: 660 ALYFHDEMIQKGFRLTATSYSALIRLLNKKKKFVEARELFHDMRKEGLTAESDVYDFYID 719

Query: 649 C-CTEARSPYDMGFCHELMAVS 669
               E      +  C EL+  S
Sbjct: 720 LNFNEDNLESTLALCDELVEAS 741



 Score =  132 bits (331), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 90/308 (29%), Positives = 142/308 (46%), Gaps = 36/308 (11%)

Query: 381 KLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDV----------------------- 417
           KLLD+MV  G +PN   Y  ++       ++++AL V                       
Sbjct: 312 KLLDEMVAGGVEPNATVYTSVVALLCDKGWISDALRVVEDMVQRKVILDEALYTTVLSGF 371

Query: 418 ------------FKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDT 465
                       F +MQ  G   D VTY T+I+   +A  L+ A  + ++M A  L  D 
Sbjct: 372 CNKGDLVSARRWFDEMQRKGLATDGVTYTTMINGLCRAVELEEAEKLLQEMWARRLDVDE 431

Query: 466 FTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRD 525
            TY+V+I+   K G +  A Q+   MV +G  PN+VTY  +     K  + Q+A +L  +
Sbjct: 432 VTYTVLIDGYCKRGKMAEAFQMHNAMVQRGVTPNVVTYTALTDGLCKQGDVQAANELLHE 491

Query: 526 MQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGN 585
           M N G E +  TY+ ++  L   GYL++A    A+M      PD   Y  L+D   K+G+
Sbjct: 492 MSNKGLELNACTYNSLINGLCKAGYLEQAMRTMADMDTACLKPDVYTYTTLIDALCKSGD 551

Query: 586 VRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTY-T 644
           + +A    + ML  G++P + T N L++ F   G++     LL  ML   + P+  TY +
Sbjct: 552 LDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKKLLDWMLEKNIHPNAATYNS 611

Query: 645 LLLSCCTE 652
           L+   C E
Sbjct: 612 LMKQYCIE 619



 Score =  117 bits (294), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 78/284 (27%), Positives = 124/284 (43%), Gaps = 35/284 (12%)

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
           Q G   +  TYT +   L +     A N+LL +M   G + N  TYN LI+   +A YL 
Sbjct: 459 QRGVTPNVVTYTALTDGLCKQGDVQAANELLHEMSNKGLELNACTYNSLINGLCKAGYLE 518

Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
           +A+     M     +PD  TY TLID   K+G LD A  + ++M   G+ P   TY+V++
Sbjct: 519 QAMRTMADMDTACLKPDVYTYTTLIDALCKSGDLDRAHSLLQEMLDKGIKPTIVTYNVLM 578

Query: 473 NCLGKAGHLQAAHQL---------------FCEMVNQGCI-------------------- 497
           N    +G ++   +L               +  ++ Q CI                    
Sbjct: 579 NGFCMSGRVEGGKKLLDWMLEKNIHPNAATYNSLMKQYCIENNMKSTTEIYKGMRSRDVG 638

Query: 498 PNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAV 557
           PN  TYNI+I    KARN + AL  + +M   GF     +YS ++ +L       EA  +
Sbjct: 639 PNENTYNILIKGHCKARNMKEALYFHDEMIQKGFRLTATSYSALIRLLNKKKKFVEAREL 698

Query: 558 FAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGL 601
           F +MR++    +  VY   +DL     N+       + +++A +
Sbjct: 699 FHDMRKEGLTAESDVYDFYIDLNFNEDNLESTLALCDELVEASI 742


>gi|359488007|ref|XP_002263892.2| PREDICTED: pentatricopeptide repeat-containing protein
           At1g62910-like [Vitis vinifera]
          Length = 539

 Score =  149 bits (375), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 109/363 (30%), Positives = 169/363 (46%), Gaps = 18/363 (4%)

Query: 288 SRHFASTGNVVESVSRILRQWKWGPLAEEA-LGNTNYSMDAYQANQVLKQLQDHTVALGF 346
           S HF +  + + S  R+L      P+ E A L  +   M  Y     L +  D       
Sbjct: 31  SLHFNTLDDALSSFHRMLHMHPPPPIFEFAKLLTSIAKMKHYSTVLSLSKKMD------- 83

Query: 347 FNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYG 406
                   G   D +T T ++       +      +L ++++ G QP+  T+  L+    
Sbjct: 84  ------SFGIPPDVYTLTIVINSFCHLNRVDFALSVLAKILKLGHQPDTATFTTLVRGLC 137

Query: 407 RANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTF 466
               + EALDVF +M   G +P+ VTY TL++   K   L  A++++ +M A G+SPD F
Sbjct: 138 VVGKIGEALDVFDKMVGEGFQPNVVTYGTLMNGLCKDRQLTEALNLFSEMIAKGISPDIF 197

Query: 467 TYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDM 526
           TY+ +I+ L      +    L  EMV    +PN+V+ NI++    K      A  +   M
Sbjct: 198 TYNSLIHALCNLCEWKHVTTLLNEMVKSKIMPNVVSLNIVVDALCKEGKVTEAHDVVDMM 257

Query: 527 QNAGFEPDKVTYSIVMEVLGHC--GYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAG 584
              G EPD VTY+ +M+  GHC    +DEA  VF  M R   V +   Y  L++ + K  
Sbjct: 258 IQGGVEPDVVTYAALMD--GHCLRSEMDEAVKVFDMMVRNGCVCNVVSYNTLINGYCKIQ 315

Query: 585 NVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYT 644
            + KA   +E M +  L PN  T ++L+     VG+L DA  L   M+  G  P+L TY+
Sbjct: 316 RIDKAMYLFEEMCRQELIPNTMTYSTLIHGLCHVGRLQDAIALFNEMVACGQIPNLVTYS 375

Query: 645 LLL 647
           +LL
Sbjct: 376 ILL 378



 Score =  137 bits (345), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 89/291 (30%), Positives = 144/291 (49%), Gaps = 1/291 (0%)

Query: 341 TVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNR 400
           T AL  F+ +  + G   D  TY +++  L    ++  +  LL++MV+    PNVV+ N 
Sbjct: 178 TEALNLFSEMIAK-GISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVKSKIMPNVVSLNI 236

Query: 401 LIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAG 460
           ++ +  +   + EA DV   M   G EPD VTY  L+D H     +D A+ ++  M   G
Sbjct: 237 VVDALCKEGKVTEAHDVVDMMIQGGVEPDVVTYAALMDGHCLRSEMDEAVKVFDMMVRNG 296

Query: 461 LSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSAL 520
              +  +Y+ +IN   K   +  A  LF EM  Q  IPN +TY+ +I         Q A+
Sbjct: 297 CVCNVVSYNTLINGYCKIQRIDKAMYLFEEMCRQELIPNTMTYSTLIHGLCHVGRLQDAI 356

Query: 521 KLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLW 580
            L+ +M   G  P+ VTYSI+++ L     L EA A+   +   N  PD  VY + +D  
Sbjct: 357 ALFNEMVACGQIPNLVTYSILLDYLCKNHRLAEAMALLKAIEGSNLDPDVQVYNIAIDGM 416

Query: 581 GKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGM 631
            +AG++  A + +  +   GL+P+V T N ++    + G L +A  L + M
Sbjct: 417 CRAGDLEAARDLFSNLAPRGLQPDVWTHNIMIRGLCKRGLLDEASKLFREM 467



 Score =  135 bits (340), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 84/266 (31%), Positives = 142/266 (53%)

Query: 382 LLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHA 441
           ++D M++ G +P+VVTY  L+  +   + ++EA+ VF  M   GC  + V+Y TLI+ + 
Sbjct: 253 VVDMMIQGGVEPDVVTYAALMDGHCLRSEMDEAVKVFDMMVRNGCVCNVVSYNTLINGYC 312

Query: 442 KAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLV 501
           K   +D AM ++++M    L P+T TYS +I+ L   G LQ A  LF EMV  G IPNLV
Sbjct: 313 KIQRIDKAMYLFEEMCRQELIPNTMTYSTLIHGLCHVGRLQDAIALFNEMVACGQIPNLV 372

Query: 502 TYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEM 561
           TY+I++    K      A+ L + ++ +  +PD   Y+I ++ +   G L+ A  +F+ +
Sbjct: 373 TYSILLDYLCKNHRLAEAMALLKAIEGSNLDPDVQVYNIAIDGMCRAGDLEAARDLFSNL 432

Query: 562 RRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQL 621
             +   PD   + +++    K G + +A + +  M + G   N  T N++    L+  + 
Sbjct: 433 APRGLQPDVWTHNIMIRGLCKRGLLDEASKLFREMDENGCLRNGCTYNTITQGLLQNNKT 492

Query: 622 SDAYHLLQGMLNLGLKPSLQTYTLLL 647
           S A  LL+ ML  G    + T  LL+
Sbjct: 493 SRAIQLLEEMLARGFSADVSTTALLV 518



 Score =  114 bits (285), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 77/256 (30%), Positives = 128/256 (50%), Gaps = 2/256 (0%)

Query: 353 QAGFKHDEHTYTTMV-GILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           Q G + D  TY  ++ G   R+    A+ K+ D MVR+GC  NVV+YN LI+ Y +   +
Sbjct: 259 QGGVEPDVVTYAALMDGHCLRSEMDEAV-KVFDMMVRNGCVCNVVSYNTLINGYCKIQRI 317

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
           ++A+ +F++M      P+ +TY TLI      G L  A+ ++ +M A G  P+  TYS++
Sbjct: 318 DKAMYLFEEMCRQELIPNTMTYSTLIHGLCHVGRLQDAIALFNEMVACGQIPNLVTYSIL 377

Query: 472 INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF 531
           ++ L K   L  A  L   +      P++  YNI I    +A + ++A  L+ ++   G 
Sbjct: 378 LDYLCKNHRLAEAMALLKAIEGSNLDPDVQVYNIAIDGMCRAGDLEAARDLFSNLAPRGL 437

Query: 532 EPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWE 591
           +PD  T++I++  L   G LDEA  +F EM     + +   Y  +     +     +A +
Sbjct: 438 QPDVWTHNIMIRGLCKRGLLDEASKLFREMDENGCLRNGCTYNTITQGLLQNNKTSRAIQ 497

Query: 592 WYEAMLQAGLRPNVPT 607
             E ML  G   +V T
Sbjct: 498 LLEEMLARGFSADVST 513



 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 64/256 (25%), Positives = 120/256 (46%)

Query: 393 PNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDM 452
           P +  + +L+ S  +  + +  L + K+M   G  PD  T   +I+       +D A+ +
Sbjct: 54  PPIFEFAKLLTSIAKMKHYSTVLSLSKKMDSFGIPPDVYTLTIVINSFCHLNRVDFALSV 113

Query: 453 YKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAK 512
             K+   G  PDT T++ ++  L   G +  A  +F +MV +G  PN+VTY  ++    K
Sbjct: 114 LAKILKLGHQPDTATFTTLVRGLCVVGKIGEALDVFDKMVGEGFQPNVVTYGTLMNGLCK 173

Query: 513 ARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPV 572
            R    AL L+ +M   G  PD  TY+ ++  L +         +  EM +   +P+   
Sbjct: 174 DRQLTEALNLFSEMIAKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVKSKIMPNVVS 233

Query: 573 YGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGML 632
             ++VD   K G V +A +  + M+Q G+ P+V T  +L+       ++ +A  +   M+
Sbjct: 234 LNIVVDALCKEGKVTEAHDVVDMMIQGGVEPDVVTYAALMDGHCLRSEMDEAVKVFDMMV 293

Query: 633 NLGLKPSLQTYTLLLS 648
             G   ++ +Y  L++
Sbjct: 294 RNGCVCNVVSYNTLIN 309



 Score =  102 bits (254), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 69/242 (28%), Positives = 114/242 (47%), Gaps = 1/242 (0%)

Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLI 402
           A+  F+ + R  G   +  +Y T++    + ++      L ++M R    PN +TY+ LI
Sbjct: 285 AVKVFDMMVRN-GCVCNVVSYNTLINGYCKIQRIDKAMYLFEEMCRQELIPNTMTYSTLI 343

Query: 403 HSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLS 462
           H       L +A+ +F +M   G  P+ VTY  L+D   K   L  AM + K ++ + L 
Sbjct: 344 HGLCHVGRLQDAIALFNEMVACGQIPNLVTYSILLDYLCKNHRLAEAMALLKAIEGSNLD 403

Query: 463 PDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKL 522
           PD   Y++ I+ + +AG L+AA  LF  +  +G  P++ T+NIMI    K      A KL
Sbjct: 404 PDVQVYNIAIDGMCRAGDLEAARDLFSNLAPRGLQPDVWTHNIMIRGLCKRGLLDEASKL 463

Query: 523 YRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGK 582
           +R+M   G   +  TY+ + + L        A  +  EM  + +  D     LLV +   
Sbjct: 464 FREMDENGCLRNGCTYNTITQGLLQNNKTSRAIQLLEEMLARGFSADVSTTALLVKMLSD 523

Query: 583 AG 584
            G
Sbjct: 524 DG 525



 Score = 96.3 bits (238), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 67/222 (30%), Positives = 111/222 (50%), Gaps = 3/222 (1%)

Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMV-GILGRARQFGAINKLLDQMVRDGCQPNVVTYNRL 401
           A+  F  + RQ     +  TY+T++ G+    R   AI  L ++MV  G  PN+VTY+ L
Sbjct: 320 AMYLFEEMCRQELIP-NTMTYSTLIHGLCHVGRLQDAI-ALFNEMVACGQIPNLVTYSIL 377

Query: 402 IHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGL 461
           +    + + L EA+ + K ++    +PD   Y   ID   +AG L+ A D++  +   GL
Sbjct: 378 LDYLCKNHRLAEAMALLKAIEGSNLDPDVQVYNIAIDGMCRAGDLEAARDLFSNLAPRGL 437

Query: 462 SPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALK 521
            PD +T++++I  L K G L  A +LF EM   GC+ N  TYN +     +      A++
Sbjct: 438 QPDVWTHNIMIRGLCKRGLLDEASKLFREMDENGCLRNGCTYNTITQGLLQNNKTSRAIQ 497

Query: 522 LYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRR 563
           L  +M   GF  D  T ++++++L   G     + +  E  R
Sbjct: 498 LLEEMLARGFSADVSTTALLVKMLSDDGLDQSVKQILCEFMR 539



 Score = 76.3 bits (186), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 64/250 (25%), Positives = 107/250 (42%), Gaps = 37/250 (14%)

Query: 498 PNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAV 557
           P +  +  ++   AK ++Y + L L + M + G  PD  T +IV+    H   +D A +V
Sbjct: 54  PPIFEFAKLLTSIAKMKHYSTVLSLSKKMDSFGIPPDVYTLTIVINSFCHLNRVDFALSV 113

Query: 558 FAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLR 617
            A++ +    PD   +  LV      G + +A + ++ M+  G +PNV T  +L++   +
Sbjct: 114 LAKILKLGHQPDTATFTTLVRGLCVVGKIGEALDVFDKMVGEGFQPNVVTYGTLMNGLCK 173

Query: 618 VGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGFCHELMAVSGHPAHMFL 677
             QL++A +L   M+  G+ P + TY  L+               H L  +         
Sbjct: 174 DRQLTEALNLFSEMIAKGISPDIFTYNSLI---------------HALCNLCEWK----- 213

Query: 678 LSMPSPGPDGQNVRDHVGSFL-EMMHSEDRESKRGLVDAVVDFLHKSGLKEEAGSVWEVA 736
                          HV + L EM+ S+   +   L + VVD L K G   EA  V ++ 
Sbjct: 214 ---------------HVTTLLNEMVKSKIMPNVVSL-NIVVDALCKEGKVTEAHDVVDMM 257

Query: 737 AQKNVYPDAV 746
            Q  V PD V
Sbjct: 258 IQGGVEPDVV 267


>gi|195616496|gb|ACG30078.1| PPR2 [Zea mays]
          Length = 580

 Score =  149 bits (375), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 87/294 (29%), Positives = 146/294 (49%), Gaps = 6/294 (2%)

Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLI 402
           AL  F  L+ Q  +   E TY  ++ +LGR+ Q    ++L D+M++ GCQP    Y  LI
Sbjct: 209 ALQVFEMLKEQPFYHPKEGTYMKLIVLLGRSGQPTRAHQLFDEMLQQGCQPTPELYTALI 268

Query: 403 HSYGRANYLNEALDVFKQMQVVG-CEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGL 461
            +Y R+  L+EAL +   M+    C+PD  TY T+I     A   D+   MYK M    +
Sbjct: 269 GAYCRSGLLDEALQLLNDMKSSPLCQPDVYTYSTIIKACVDAARFDLTDAMYKDMAERSI 328

Query: 462 SPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQ-GCIPNLVTYNIMIALQAKARNYQSAL 520
           SP+T T +++++  GKAG L    ++  +M++   C P++ T NI+++L       +   
Sbjct: 329 SPNTVTQNIVLSGYGKAGRLDDMERVLSDMLDSVSCKPDVWTMNIILSLFGNRGEVELME 388

Query: 521 KLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLW 580
           + Y   +  G EP+  T +I++   G     D+  AV   MR+  +      Y  +++ +
Sbjct: 389 RWYEKFRGYGVEPETRTLNILIGAYGKRRMYDKMSAVMEHMRKLAFPWTTATYNNVIEAF 448

Query: 581 GKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNL 634
            +AG+       +  M   G+RP+  T   L+  F R GQ    +H + GM+ L
Sbjct: 449 AEAGDAGNMEHAFNQMRSEGMRPDTKTFCCLIDGFSRAGQ----FHKVVGMVKL 498



 Score = 92.4 bits (228), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 65/245 (26%), Positives = 108/245 (44%), Gaps = 3/245 (1%)

Query: 412 NEALDVFKQMQVVGC-EPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSV 470
            EAL VF+ ++      P   TY  LI +  ++G    A  ++ +M   G  P    Y+ 
Sbjct: 207 QEALQVFEMLKEQPFYHPKEGTYMKLIVLLGRSGQPTRAHQLFDEMLQQGCQPTPELYTA 266

Query: 471 IINCLGKAGHLQAAHQLFCEMVNQG-CIPNLVTYNIMIALQAKARNYQSALKLYRDMQNA 529
           +I    ++G L  A QL  +M +   C P++ TY+ +I     A  +     +Y+DM   
Sbjct: 267 LIGAYCRSGLLDEALQLLNDMKSSPLCQPDVYTYSTIIKACVDAARFDLTDAMYKDMAER 326

Query: 530 GFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRK-NWVPDEPVYGLLVDLWGKAGNVRK 588
              P+ VT +IV+   G  G LD+ E V ++M    +  PD     +++ L+G  G V  
Sbjct: 327 SISPNTVTQNIVLSGYGKAGRLDDMERVLSDMLDSVSCKPDVWTMNIILSLFGNRGEVEL 386

Query: 589 AWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
              WYE     G+ P   T N L+ A+ +         +++ M  L    +  TY  ++ 
Sbjct: 387 MERWYEKFRGYGVEPETRTLNILIGAYGKRRMYDKMSAVMEHMRKLAFPWTTATYNNVIE 446

Query: 649 CCTEA 653
              EA
Sbjct: 447 AFAEA 451



 Score = 71.2 bits (173), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 49/207 (23%), Positives = 97/207 (46%), Gaps = 6/207 (2%)

Query: 357 KHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALD 416
           K D  T   ++ + G   +   + +  ++    G +P   T N LI +YG+    ++   
Sbjct: 365 KPDVWTMNIILSLFGNRGEVELMERWYEKFRGYGVEPETRTLNILIGAYGKRRMYDKMSA 424

Query: 417 VFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLG 476
           V + M+ +       TY  +I+  A+AG        + +M++ G+ PDT T+  +I+   
Sbjct: 425 VMEHMRKLAFPWTTATYNNVIEAFAEAGDAGNMEHAFNQMRSEGMRPDTKTFCCLIDGFS 484

Query: 477 KAGHLQAAHQL--FCEMVNQGCIP-NLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEP 533
           +AG     H++    ++  +  +P N   +N ++   A+A +     +++R M++   EP
Sbjct: 485 RAGQF---HKVVGMVKLAERLDVPANTPFHNAVLGACARADDLVEMERVFRRMKHTQCEP 541

Query: 534 DKVTYSIVMEVLGHCGYLDEAEAVFAE 560
           D  TYSI++E     G  D+  A+  E
Sbjct: 542 DASTYSILVEAYRKEGMTDKIYALHQE 568



 Score = 70.5 bits (171), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 37/156 (23%), Positives = 72/156 (46%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           R  G + +  T   ++G  G+ R +  ++ +++ M +        TYN +I ++  A   
Sbjct: 395 RGYGVEPETRTLNILIGAYGKRRMYDKMSAVMEHMRKLAFPWTTATYNNVIEAFAEAGDA 454

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
                 F QM+  G  PD  T+C LID  ++AG     + M K  +   +  +T  ++ +
Sbjct: 455 GNMEHAFNQMRSEGMRPDTKTFCCLIDGFSRAGQFHKVVGMVKLAERLDVPANTPFHNAV 514

Query: 472 INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMI 507
           +    +A  L    ++F  M +  C P+  TY+I++
Sbjct: 515 LGACARADDLVEMERVFRRMKHTQCEPDASTYSILV 550



 Score = 53.9 bits (128), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 34/120 (28%), Positives = 58/120 (48%), Gaps = 3/120 (2%)

Query: 347 FNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYG 406
           FN +R + G + D  T+  ++    RA QF  +  ++    R     N   +N ++ +  
Sbjct: 461 FNQMRSE-GMRPDTKTFCCLIDGFSRAGQFHKVVGMVKLAERLDVPANTPFHNAVLGACA 519

Query: 407 RANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTF 466
           RA+ L E   VF++M+   CEPD  TY  L++ + K G  D    ++++  A  L P  F
Sbjct: 520 RADDLVEMERVFRRMKHTQCEPDASTYSILVEAYRKEGMTDKIYALHQENPA--LVPADF 577


>gi|449443903|ref|XP_004139715.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
           mitochondrial-like [Cucumis sativus]
 gi|449475521|ref|XP_004154479.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
           mitochondrial-like [Cucumis sativus]
          Length = 660

 Score =  148 bits (374), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 90/320 (28%), Positives = 159/320 (49%), Gaps = 42/320 (13%)

Query: 370 LGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQ------V 423
           LG+AR+FG +N L+ +M     QP V+T+  LI+   +   +++AL+VF++M+       
Sbjct: 162 LGKAREFGKMNLLMRKMKDMNIQPTVITFGILINHLCKFRRIDDALEVFEKMKGEKEETK 221

Query: 424 VGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQA 483
           V   PD + Y TLID   K G  + A+ +  KM++   +P T T++ +IN   ++G ++ 
Sbjct: 222 VFVAPDTIMYNTLIDGLCKVGRQEEALCLMGKMRSDQCAPTTATFNCLINGYCRSGEIEV 281

Query: 484 AHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVME 543
           AH+LF EM N    PN++T N ++    K     +A++ +R MQ  G + + VTY++ + 
Sbjct: 282 AHKLFNEMENAQIEPNVITLNTLVDGMCKHNRISTAVEFFRVMQQKGLKGNNVTYTVFIN 341

Query: 544 V-----------------------------------LGHCGYLDEAEAVFAEMRRKNWVP 568
                                               L   G LD+A +V ++++   +  
Sbjct: 342 AFCNVNNMNKAMEFLDEMSKDGCFPDAVVYYTLICGLAQAGRLDDASSVVSKLKEAGFCL 401

Query: 569 DEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLL 628
           D   Y +L+  + K   + +A EW   M  AG++P+  T N+L+S F ++G    A+  +
Sbjct: 402 DRVCYNVLISEFCKKNKLDRAQEWLNEMELAGVKPDSVTYNTLISYFSKIGNFKLAHKFM 461

Query: 629 QGML-NLGLKPSLQTYTLLL 647
           + M    GL P++ TY  L+
Sbjct: 462 KKMTEEEGLSPTVFTYGALI 481



 Score =  122 bits (307), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 90/308 (29%), Positives = 139/308 (45%), Gaps = 4/308 (1%)

Query: 342 VALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRL 401
           VA   FN +   A  + +  T  T+V  + +  +     +    M + G + N VTY   
Sbjct: 281 VAHKLFNEME-NAQIEPNVITLNTLVDGMCKHNRISTAVEFFRVMQQKGLKGNNVTYTVF 339

Query: 402 IHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGL 461
           I+++   N +N+A++   +M   GC PD V Y TLI   A+AG LD A  +  K++ AG 
Sbjct: 340 INAFCNVNNMNKAMEFLDEMSKDGCFPDAVVYYTLICGLAQAGRLDDASSVVSKLKEAGF 399

Query: 462 SPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALK 521
             D   Y+V+I+   K   L  A +   EM   G  P+ VTYN +I+  +K  N++ A K
Sbjct: 400 CLDRVCYNVLISEFCKKNKLDRAQEWLNEMELAGVKPDSVTYNTLISYFSKIGNFKLAHK 459

Query: 522 LYRDM-QNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRR--KNWVPDEPVYGLLVD 578
             + M +  G  P   TY  ++        +DEA  +F EM        P+  +Y +L+D
Sbjct: 460 FMKKMTEEEGLSPTVFTYGALIHAYCLNNNIDEAIKIFKEMNNVASKVPPNTVIYNILID 519

Query: 579 LWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKP 638
              K   V  A    + M   G+ PN  T NS+  A      L  A+ L+  M+     P
Sbjct: 520 SLCKQTQVNFALSLLDDMKFRGVMPNTTTYNSIFKALRDKNWLDKAFKLMDRMVEQACNP 579

Query: 639 SLQTYTLL 646
              T  +L
Sbjct: 580 DYITMEIL 587



 Score =  110 bits (274), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 80/295 (27%), Positives = 124/295 (42%), Gaps = 39/295 (13%)

Query: 341 TVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTY-- 398
           + A+ FF  ++ Q G K +  TYT  +             + LD+M +DGC P+ V Y  
Sbjct: 315 STAVEFFRVMQ-QKGLKGNNVTYTVFINAFCNVNNMNKAMEFLDEMSKDGCFPDAVVYYT 373

Query: 399 ---------------------------------NRLIHSYGRANYLNEALDVFKQMQVVG 425
                                            N LI  + + N L+ A +   +M++ G
Sbjct: 374 LICGLAQAGRLDDASSVVSKLKEAGFCLDRVCYNVLISEFCKKNKLDRAQEWLNEMELAG 433

Query: 426 CEPDRVTYCTLIDIHAKAGFLDVAMDMYKKM-QAAGLSPDTFTYSVIINCLGKAGHLQAA 484
            +PD VTY TLI   +K G   +A    KKM +  GLSP  FTY  +I+      ++  A
Sbjct: 434 VKPDSVTYNTLISYFSKIGNFKLAHKFMKKMTEEEGLSPTVFTYGALIHAYCLNNNIDEA 493

Query: 485 HQLFCEMVN--QGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVM 542
            ++F EM N      PN V YNI+I    K      AL L  DM+  G  P+  TY+ + 
Sbjct: 494 IKIFKEMNNVASKVPPNTVIYNILIDSLCKQTQVNFALSLLDDMKFRGVMPNTTTYNSIF 553

Query: 543 EVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAML 597
           + L    +LD+A  +   M  +   PD     +L +     G + K  ++ +  +
Sbjct: 554 KALRDKNWLDKAFKLMDRMVEQACNPDYITMEILTEWLSAVGEITKLKKFTQGCM 608



 Score = 76.6 bits (187), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 68/294 (23%), Positives = 121/294 (41%), Gaps = 11/294 (3%)

Query: 368 GILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCE 427
           G+ GR ++   I  L+ +  +    P+ +   +LI    R+   N A ++   + ++   
Sbjct: 91  GLEGRVKE-DEIAGLVSKFGKHNIFPDTIALTQLISKLCRSGNTNLAWNILDNLMMLNGL 149

Query: 428 PDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQL 487
            D      L+    KA        + +KM+   + P   T+ ++IN L K   +  A ++
Sbjct: 150 KDAAPCNALLTGLGKAREFGKMNLLMRKMKDMNIQPTVITFGILINHLCKFRRIDDALEV 209

Query: 488 FCEMVNQG------CIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIV 541
           F +M  +         P+ + YN +I    K    + AL L   M++    P   T++ +
Sbjct: 210 FEKMKGEKEETKVFVAPDTIMYNTLIDGLCKVGRQEEALCLMGKMRSDQCAPTTATFNCL 269

Query: 542 MEVLGHC--GYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQA 599
           +   G+C  G ++ A  +F EM      P+      LVD   K   +  A E++  M Q 
Sbjct: 270 IN--GYCRSGEIEVAHKLFNEMENAQIEPNVITLNTLVDGMCKHNRISTAVEFFRVMQQK 327

Query: 600 GLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEA 653
           GL+ N  T    ++AF  V  ++ A   L  M   G  P    Y  L+    +A
Sbjct: 328 GLKGNNVTYTVFINAFCNVNNMNKAMEFLDEMSKDGCFPDAVVYYTLICGLAQA 381


>gi|356533316|ref|XP_003535211.1| PREDICTED: pentatricopeptide repeat-containing protein At5g04810,
           chloroplastic-like [Glycine max]
          Length = 918

 Score =  148 bits (374), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 86/320 (26%), Positives = 162/320 (50%)

Query: 350 LRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRAN 409
           + + +G KH+  TY+ ++    + + +     + +   +DG +P+VV YN +I ++   +
Sbjct: 474 MMKMSGIKHNMKTYSMLINGFLKLKDWANAFSVFEDFTKDGLKPDVVLYNNIITAFCGMS 533

Query: 410 YLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYS 469
            ++ A+ + KQMQ     P   T+  +I   A+AG +  A++++  M+ +G  P   TY+
Sbjct: 534 NMDRAICMVKQMQKERYRPTTRTFLPIIHGFARAGEMRRALEIFDMMRRSGCIPTVHTYN 593

Query: 470 VIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNA 529
            +I  L +   +  A  +  +M   G  PN  TY  ++   A   + + A + +  ++N 
Sbjct: 594 ALILGLVEKRKMAKAVAILDQMNVAGVGPNEHTYTTLMQGYASLGDTEKAFQYFSVLRNE 653

Query: 530 GFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKA 589
           G E D  TY  +++     G +  A AV  EM  KN   +  VY +L+D W + G+V +A
Sbjct: 654 GLEIDVYTYEALLKSCCKSGRMQSALAVTKEMSAKNIPRNTFVYNILIDGWARRGDVWEA 713

Query: 590 WEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSC 649
            +  + M + G+ P++ T  S ++A  + G +  A  ++Q M   G+KP+L+TYT L++ 
Sbjct: 714 ADLMQQMRKEGVLPDIHTYTSFVNACCKAGDMQKATEIIQEMEAFGIKPNLKTYTTLING 773

Query: 650 CTEARSPYDMGFCHELMAVS 669
              A  P     C E M ++
Sbjct: 774 WARASMPEKALSCFEEMKLA 793



 Score =  118 bits (296), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 81/308 (26%), Positives = 133/308 (43%), Gaps = 19/308 (6%)

Query: 356 FKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEAL 415
           ++    T+  ++    RA +     ++ D M R GC P V TYN LI        + +A+
Sbjct: 550 YRPTTRTFLPIIHGFARAGEMRRALEIFDMMRRSGCIPTVHTYNALILGLVEKRKMAKAV 609

Query: 416 DVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCL 475
            +  QM V G  P+  TY TL+  +A  G  + A   +  ++  GL  D +TY  ++   
Sbjct: 610 AILDQMNVAGVGPNEHTYTTLMQGYASLGDTEKAFQYFSVLRNEGLEIDVYTYEALLKSC 669

Query: 476 GKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDK 535
            K+G +Q+A  +  EM  +    N   YNI+I   A+  +   A  L + M+  G  PD 
Sbjct: 670 CKSGRMQSALAVTKEMSAKNIPRNTFVYNILIDGWARRGDVWEAADLMQQMRKEGVLPDI 729

Query: 536 VTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEA 595
            TY+  +      G + +A  +  EM      P+   Y  L++ W +A    KA   +E 
Sbjct: 730 HTYTSFVNACCKAGDMQKATEIIQEMEAFGIKPNLKTYTTLINGWARASMPEKALSCFEE 789

Query: 596 MLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCC---TE 652
           M  A L+P+    + L+++ L     + +Y                 Y+ LLS C    E
Sbjct: 790 MKLAELKPDKAAYHCLMTSLLSRATFAQSY----------------VYSGLLSVCREMIE 833

Query: 653 ARSPYDMG 660
           +    DMG
Sbjct: 834 SEMTVDMG 841



 Score =  115 bits (289), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 68/296 (22%), Positives = 145/296 (48%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           ++ G +    TY+ +VG   +  +  A +    +        N VTY  +I+++ +   +
Sbjct: 336 KEEGIEMTIVTYSIIVGGFAKMGKADAADHWFKEAKEKLPSLNAVTYGSIIYAHCQTCNM 395

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
           + A  + ++M+V G +     Y T++D +   G  +  + ++ +++  G SP   +Y  +
Sbjct: 396 DRAEALVREMEVQGIDAPIDIYHTMMDGYTMIGNEEKCLIVFDRLKECGFSPSVISYGCL 455

Query: 472 INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF 531
           IN   K G +  A Q+   M   G   N+ TY+++I    K +++ +A  ++ D    G 
Sbjct: 456 INLYTKIGKVSKALQISKMMKMSGIKHNMKTYSMLINGFLKLKDWANAFSVFEDFTKDGL 515

Query: 532 EPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWE 591
           +PD V Y+ ++        +D A  +  +M+++ + P    +  ++  + +AG +R+A E
Sbjct: 516 KPDVVLYNNIITAFCGMSNMDRAICMVKQMQKERYRPTTRTFLPIIHGFARAGEMRRALE 575

Query: 592 WYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
            ++ M ++G  P V T N+L+   +   +++ A  +L  M   G+ P+  TYT L+
Sbjct: 576 IFDMMRRSGCIPTVHTYNALILGLVEKRKMAKAVAILDQMNVAGVGPNEHTYTTLM 631



 Score =  110 bits (276), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 68/257 (26%), Positives = 120/257 (46%)

Query: 392 QPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMD 451
           +P    Y  ++  Y R   ++ A   F+ MQ  G EP    Y +LI  +A    ++ A+ 
Sbjct: 271 KPARKEYGLMVKYYARRGDMHHARQTFESMQARGIEPSSHVYSSLIHAYAVGRDMEEALH 330

Query: 452 MYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQA 511
             +KM+  G+     TYS+I+    K G   AA   F E   +    N VTY  +I    
Sbjct: 331 CVRKMKEEGIEMTIVTYSIIVGGFAKMGKADAADHWFKEAKEKLPSLNAVTYGSIIYAHC 390

Query: 512 KARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEP 571
           +  N   A  L R+M+  G +     Y  +M+     G  ++   VF  ++   + P   
Sbjct: 391 QTCNMDRAEALVREMEVQGIDAPIDIYHTMMDGYTMIGNEEKCLIVFDRLKECGFSPSVI 450

Query: 572 VYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGM 631
            YG L++L+ K G V KA +  + M  +G++ N+ T + L++ FL++   ++A+ + +  
Sbjct: 451 SYGCLINLYTKIGKVSKALQISKMMKMSGIKHNMKTYSMLINGFLKLKDWANAFSVFEDF 510

Query: 632 LNLGLKPSLQTYTLLLS 648
              GLKP +  Y  +++
Sbjct: 511 TKDGLKPDVVLYNNIIT 527



 Score =  108 bits (270), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 74/300 (24%), Positives = 132/300 (44%), Gaps = 2/300 (0%)

Query: 382 LLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHA 441
           L+ +M   G    +  Y+ ++  Y       + L VF +++  G  P  ++Y  LI+++ 
Sbjct: 401 LVREMEVQGIDAPIDIYHTMMDGYTMIGNEEKCLIVFDRLKECGFSPSVISYGCLINLYT 460

Query: 442 KAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLV 501
           K G +  A+ + K M+ +G+  +  TYS++IN   K      A  +F +    G  P++V
Sbjct: 461 KIGKVSKALQISKMMKMSGIKHNMKTYSMLINGFLKLKDWANAFSVFEDFTKDGLKPDVV 520

Query: 502 TYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEM 561
            YN +I       N   A+ + + MQ   + P   T+  ++      G +  A  +F  M
Sbjct: 521 LYNNIITAFCGMSNMDRAICMVKQMQKERYRPTTRTFLPIIHGFARAGEMRRALEIFDMM 580

Query: 562 RRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQL 621
           RR   +P    Y  L+    +   + KA    + M  AG+ PN  T  +L+  +  +G  
Sbjct: 581 RRSGCIPTVHTYNALILGLVEKRKMAKAVAILDQMNVAGVGPNEHTYTTLMQGYASLGDT 640

Query: 622 SDAYHLLQGMLNLGLKPSLQTYTLLL-SCCTEARSPYDMGFCHELMAVSGHPAHMFLLSM 680
             A+     + N GL+  + TY  LL SCC   R    +    E M+    P + F+ ++
Sbjct: 641 EKAFQYFSVLRNEGLEIDVYTYEALLKSCCKSGRMQSALAVTKE-MSAKNIPRNTFVYNI 699



 Score =  104 bits (260), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 65/235 (27%), Positives = 113/235 (48%), Gaps = 1/235 (0%)

Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLI 402
           AL  F+ +RR +G     HTY  ++  L   R+      +LDQM   G  PN  TY  L+
Sbjct: 573 ALEIFDMMRR-SGCIPTVHTYNALILGLVEKRKMAKAVAILDQMNVAGVGPNEHTYTTLM 631

Query: 403 HSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLS 462
             Y       +A   F  ++  G E D  TY  L+    K+G +  A+ + K+M A  + 
Sbjct: 632 QGYASLGDTEKAFQYFSVLRNEGLEIDVYTYEALLKSCCKSGRMQSALAVTKEMSAKNIP 691

Query: 463 PDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKL 522
            +TF Y+++I+   + G +  A  L  +M  +G +P++ TY   +    KA + Q A ++
Sbjct: 692 RNTFVYNILIDGWARRGDVWEAADLMQQMRKEGVLPDIHTYTSFVNACCKAGDMQKATEI 751

Query: 523 YRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLV 577
            ++M+  G +P+  TY+ ++         ++A + F EM+     PD+  Y  L+
Sbjct: 752 IQEMEAFGIKPNLKTYTTLINGWARASMPEKALSCFEEMKLAELKPDKAAYHCLM 806



 Score = 93.6 bits (231), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 65/285 (22%), Positives = 127/285 (44%)

Query: 363 YTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQ 422
           Y  MV    R        +  + M   G +P+   Y+ LIH+Y     + EAL   ++M+
Sbjct: 277 YGLMVKYYARRGDMHHARQTFESMQARGIEPSSHVYSSLIHAYAVGRDMEEALHCVRKMK 336

Query: 423 VVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQ 482
             G E   VTY  ++   AK G  D A   +K+ +    S +  TY  II    +  ++ 
Sbjct: 337 EEGIEMTIVTYSIIVGGFAKMGKADAADHWFKEAKEKLPSLNAVTYGSIIYAHCQTCNMD 396

Query: 483 AAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVM 542
            A  L  EM  QG    +  Y+ M+       N +  L ++  ++  GF P  ++Y  ++
Sbjct: 397 RAEALVREMEVQGIDAPIDIYHTMMDGYTMIGNEEKCLIVFDRLKECGFSPSVISYGCLI 456

Query: 543 EVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLR 602
            +    G + +A  +   M+      +   Y +L++ + K  +   A+  +E   + GL+
Sbjct: 457 NLYTKIGKVSKALQISKMMKMSGIKHNMKTYSMLINGFLKLKDWANAFSVFEDFTKDGLK 516

Query: 603 PNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
           P+V   N++++AF  +  +  A  +++ M     +P+ +T+  ++
Sbjct: 517 PDVVLYNNIITAFCGMSNMDRAICMVKQMQKERYRPTTRTFLPII 561



 Score = 85.5 bits (210), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 75/366 (20%), Positives = 159/366 (43%), Gaps = 16/366 (4%)

Query: 427 EPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQ 486
           +P R  Y  ++  +A+ G +  A   ++ MQA G+ P +  YS +I+       ++ A  
Sbjct: 271 KPARKEYGLMVKYYARRGDMHHARQTFESMQARGIEPSSHVYSSLIHAYAVGRDMEEALH 330

Query: 487 LFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLG 546
              +M  +G    +VTY+I++   AK     +A   +++ +      + VTY  +  +  
Sbjct: 331 CVRKMKEEGIEMTIVTYSIIVGGFAKMGKADAADHWFKEAKEKLPSLNAVTYGSI--IYA 388

Query: 547 HCGY--LDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPN 604
           HC    +D AEA+  EM  +       +Y  ++D +   GN  K    ++ + + G  P+
Sbjct: 389 HCQTCNMDRAEALVREMEVQGIDAPIDIYHTMMDGYTMIGNEEKCLIVFDRLKECGFSPS 448

Query: 605 VPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGFCHE 664
           V +   L++ + ++G++S A  + + M   G+K +++TY++L++   + +   +     E
Sbjct: 449 VISYGCLINLYTKIGKVSKALQISKMMKMSGIKHNMKTYSMLINGFLKLKDWANAFSVFE 508

Query: 665 LMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSED-RESKRGLVDAVVDFLHKS 723
                G    + L +       G +  D     ++ M  E  R + R  +  +  F  ++
Sbjct: 509 DFTKDGLKPDVVLYNNIITAFCGMSNMDRAICMVKQMQKERYRPTTRTFLPIIHGFA-RA 567

Query: 724 GLKEEAGSVWEVAAQKNVYPDAVKEKGMSYWLINLHVMSDGTAVIALSRTLAWFRKQMLI 783
           G    A  ++++  +    P       +   L+    M+   A++           QM +
Sbjct: 568 GEMRRALEIFDMMRRSGCIPTVHTYNALILGLVEKRKMAKAVAIL----------DQMNV 617

Query: 784 SGVGPS 789
           +GVGP+
Sbjct: 618 AGVGPN 623


>gi|255660832|gb|ACU25585.1| pentatricopeptide repeat-containing protein [Aloysia virgata]
 gi|410109881|gb|AFV61020.1| pentatricopeptide repeat-containing protein 11, partial [Aloysia
           virgata]
          Length = 418

 Score =  148 bits (374), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 85/279 (30%), Positives = 151/279 (54%)

Query: 370 LGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPD 429
           L + + F  +    ++++  G   ++  +N L+H + +   +  A  VF  +   G  P 
Sbjct: 111 LMKLKYFKLVWGFYEEILDCGYPASLYFFNILMHRFCKEGDIRVAQLVFNAITKWGLRPS 170

Query: 430 RVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFC 489
            V++ TL++ + + G LD    +   M A+G+ PD +TYSV+IN L K   +  A+ LF 
Sbjct: 171 VVSFNTLMNGYIRLGDLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMDDANGLFD 230

Query: 490 EMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCG 549
           EM+++G +PN VT+  +IA   K R    A+++Y+ M +    PD +TY+ ++  L   G
Sbjct: 231 EMLDKGLVPNGVTFTTLIAGHCKNRRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKG 290

Query: 550 YLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCN 609
            L +A  +  EM  K   PD+  Y  L+D   K G++  A+E  + M+Q  +R +     
Sbjct: 291 DLKQAHDLIDEMSMKGLKPDKITYTTLIDGCCKEGDLETAFEHRKRMIQENIRLDDVAYT 350

Query: 610 SLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
           +L+S   + G+  DA  +L+ ML++GLKP   TYT++++
Sbjct: 351 ALISGLCQEGRYLDAEKVLREMLSVGLKPDTGTYTMIIN 389



 Score =  116 bits (291), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 93/320 (29%), Positives = 155/320 (48%), Gaps = 9/320 (2%)

Query: 291 FASTGNVVESVSRILRQWK--WGPLAEEALGNTNYSMDAYQANQVLKQL---QDHTVALG 345
           F +   V+E + + L+ +K  WG   EE L +  Y    Y  N ++ +     D  VA  
Sbjct: 101 FDTCRKVLEHLMK-LKYFKLVWG-FYEEIL-DCGYPASLYFFNILMHRFCKEGDIRVAQL 157

Query: 346 FFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSY 405
            FN + +  G +    ++ T++    R        +L   M   G QP+V TY+ LI+  
Sbjct: 158 VFNAITKW-GLRPSVVSFNTLMNGYIRLGDLDEGFRLKSAMHASGVQPDVYTYSVLINGL 216

Query: 406 GRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDT 465
            + + +++A  +F +M   G  P+ VT+ TLI  H K   +D+AM++YK+M +  LSPD 
Sbjct: 217 CKESKMDDANGLFDEMLDKGLVPNGVTFTTLIAGHCKNRRVDLAMEIYKQMLSQSLSPDL 276

Query: 466 FTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRD 525
            TY+ +I  L K G L+ AH L  EM  +G  P+ +TY  +I    K  + ++A +  + 
Sbjct: 277 ITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKITYTTLIDGCCKEGDLETAFEHRKR 336

Query: 526 MQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGN 585
           M       D V Y+ ++  L   G   +AE V  EM      PD   Y ++++ + K G+
Sbjct: 337 MIQENIRLDDVAYTALISGLCQEGRYLDAEKVLREMLSVGLKPDTGTYTMIINEFCKKGD 396

Query: 586 VRKAWEWYEAMLQAGLRPNV 605
           V    +  + M + G  P+V
Sbjct: 397 VWTGSKLLKEMQRDGHVPSV 416



 Score = 98.6 bits (244), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 73/317 (23%), Positives = 142/317 (44%), Gaps = 19/317 (5%)

Query: 356 FKHDEHTYTTMVGILGRARQFGAINKLLDQMV-RDGC-----------------QPNVVT 397
           F+H   +Y TM+ +L   +       L+  +V R G                  + ++  
Sbjct: 9   FRHTLDSYCTMIHLLCTHQMLSEAKSLIRVVVSRKGKGSASAVFAAILETKGTQRSDIYV 68

Query: 398 YNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQ 457
           ++ LI +Y  + +L +A++ ++  +         T   +++   K  +  +    Y+++ 
Sbjct: 69  FSGLITAYLESGFLRDAIECYRLTREHKFWVPFDTCRKVLEHLMKLKYFKLVWGFYEEIL 128

Query: 458 AAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQ 517
             G     + ++++++   K G ++ A  +F  +   G  P++V++N ++    +  +  
Sbjct: 129 DCGYPASLYFFNILMHRFCKEGDIRVAQLVFNAITKWGLRPSVVSFNTLMNGYIRLGDLD 188

Query: 518 SALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLV 577
              +L   M  +G +PD  TYS+++  L     +D+A  +F EM  K  VP+   +  L+
Sbjct: 189 EGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMDDANGLFDEMLDKGLVPNGVTFTTLI 248

Query: 578 DLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLK 637
               K   V  A E Y+ ML   L P++ T N+L+    + G L  A+ L+  M   GLK
Sbjct: 249 AGHCKNRRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLK 308

Query: 638 PSLQTYTLLLS-CCTEA 653
           P   TYT L+  CC E 
Sbjct: 309 PDKITYTTLIDGCCKEG 325



 Score = 91.7 bits (226), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 52/176 (29%), Positives = 92/176 (52%)

Query: 362 TYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQM 421
           T+TT++    + R+     ++  QM+     P+++TYN LI+   +   L +A D+  +M
Sbjct: 243 TFTTLIAGHCKNRRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHDLIDEM 302

Query: 422 QVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHL 481
            + G +PD++TY TLID   K G L+ A +  K+M    +  D   Y+ +I+ L + G  
Sbjct: 303 SMKGLKPDKITYTTLIDGCCKEGDLETAFEHRKRMIQENIRLDDVAYTALISGLCQEGRY 362

Query: 482 QAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVT 537
             A ++  EM++ G  P+  TY ++I    K  +  +  KL ++MQ  G  P  V+
Sbjct: 363 LDAEKVLREMLSVGLKPDTGTYTMIINEFCKKGDVWTGSKLLKEMQRDGHVPSVVS 418


>gi|414871539|tpg|DAA50096.1| TPA: ATP binding protein [Zea mays]
          Length = 692

 Score =  148 bits (374), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 82/293 (27%), Positives = 148/293 (50%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           G K +   Y T++  L  A ++    +LL +M    C  + VT+N L+  + +   ++  
Sbjct: 364 GLKPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRV 423

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
           +++ +QM   GC PD +TY T+I+   K G +D A+ + K M A G  P+T +Y++++  
Sbjct: 424 IELLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKG 483

Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPD 534
           L  A     A  L  +M+ QGC  N +T+N +I    K    + A++L + M   G  PD
Sbjct: 484 LCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIELLKQMLVNGCSPD 543

Query: 535 KVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYE 594
            ++YS V++ LG  G  DEA  +   M  K   P+  +Y  +     + G + K  + ++
Sbjct: 544 LISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSREGRINKVIQMFD 603

Query: 595 AMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
            +    +R +    N+++S+  + G+   A   L  M++ G  P+  TYT+L+
Sbjct: 604 NIQDTTIRSDAVLYNAVISSLCKRGETERAIEFLAYMVSSGCVPNESTYTILI 656



 Score =  142 bits (357), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 93/334 (27%), Positives = 154/334 (46%), Gaps = 2/334 (0%)

Query: 316 EALGNTNYSMDAYQANQVLKQLQDHTVALGFFNWLRRQAGF--KHDEHTYTTMVGILGRA 373
           E L     ++D    N VL  + D        + LR    F  + D  +Y  ++  L  A
Sbjct: 218 EDLHARGCALDVGNCNLVLNAICDQGSVDEALHLLRDLPSFGCEPDVVSYNAVLKGLCMA 277

Query: 374 RQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTY 433
           +++G + +L+++MVR  C PN+VT+N LI    R        +V  QM   GC PD   Y
Sbjct: 278 KRWGCVQELMEEMVRMACPPNIVTFNTLISYLCRNGLFERVHEVLAQMVEHGCTPDIRMY 337

Query: 434 CTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVN 493
            T+ID   K G L+VA ++  +M + GL P+   Y+ ++  L  A   +   +L  EM +
Sbjct: 338 ATIIDGICKEGHLEVAHEILNRMPSYGLKPNVVCYNTLLKGLCSAERWEETEELLAEMFD 397

Query: 494 QGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDE 553
           + C  + VT+NI++    +       ++L   M   G  PD +TY+ V+      G +DE
Sbjct: 398 KDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCMPDVITYTTVINGFCKEGLIDE 457

Query: 554 AEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLS 613
           A  +   M      P+   Y +++     A     A +    M+Q G   N  T N+L++
Sbjct: 458 AVMLLKSMTACGCKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLIN 517

Query: 614 AFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
              + G +  A  LL+ ML  G  P L +Y+ ++
Sbjct: 518 FLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVI 551



 Score =  129 bits (323), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 94/404 (23%), Positives = 181/404 (44%), Gaps = 1/404 (0%)

Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLI 402
           AL   + + R+ G       Y  ++    R   F +  ++L+ +   GC  +V   N ++
Sbjct: 178 ALAVLDEMPRR-GCAPIPPMYHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVL 236

Query: 403 HSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLS 462
           ++      ++EAL + + +   GCEPD V+Y  ++     A       ++ ++M      
Sbjct: 237 NAICDQGSVDEALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACP 296

Query: 463 PDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKL 522
           P+  T++ +I+ L + G  +  H++  +MV  GC P++  Y  +I    K  + + A ++
Sbjct: 297 PNIVTFNTLISYLCRNGLFERVHEVLAQMVEHGCTPDIRMYATIIDGICKEGHLEVAHEI 356

Query: 523 YRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGK 582
              M + G +P+ V Y+ +++ L      +E E + AEM  K+   D+  + +LVD + +
Sbjct: 357 LNRMPSYGLKPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQ 416

Query: 583 AGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQT 642
            G V +  E  E ML+ G  P+V T  ++++ F + G + +A  LL+ M   G KP+  +
Sbjct: 417 NGLVDRVIELLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTIS 476

Query: 643 YTLLLSCCTEARSPYDMGFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMH 702
           YT++L     A    D       M   G P +    +        + + +     L+ M 
Sbjct: 477 YTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIELLKQML 536

Query: 703 SEDRESKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAV 746
                        V+D L K+G  +EA  +  V   K + P+ +
Sbjct: 537 VNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTI 580



 Score =  125 bits (313), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 72/277 (25%), Positives = 135/277 (48%)

Query: 359 DEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVF 418
           D+ T+  +V    +      + +LL+QM+  GC P+V+TY  +I+ + +   ++EA+ + 
Sbjct: 403 DDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLL 462

Query: 419 KQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKA 478
           K M   GC+P+ ++Y  ++     A     A D+  +M   G   +  T++ +IN L K 
Sbjct: 463 KSMTACGCKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKK 522

Query: 479 GHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTY 538
           G ++ A +L  +M+  GC P+L++Y+ +I    KA     AL+L   M N G  P+ + Y
Sbjct: 523 GLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIY 582

Query: 539 SIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQ 598
           S +   L   G +++   +F  ++      D  +Y  ++    K G   +A E+   M+ 
Sbjct: 583 SSIASALSREGRINKVIQMFDNIQDTTIRSDAVLYNAVISSLCKRGETERAIEFLAYMVS 642

Query: 599 AGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLG 635
           +G  PN  T   L+      G + +A  +L  + + G
Sbjct: 643 SGCVPNESTYTILIRGLASEGFVKEAQEMLTELCSKG 679



 Score =  120 bits (301), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 71/246 (28%), Positives = 118/246 (47%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           G   D  TYTT++    +         LL  M   GC+PN ++Y  ++     A    +A
Sbjct: 434 GCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLCSAERWVDA 493

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
            D+  QM   GC  + +T+ TLI+   K G ++ A+++ K+M   G SPD  +YS +I+ 
Sbjct: 494 EDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDG 553

Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPD 534
           LGKAG    A +L   MVN+G  PN + Y+ + +  ++       ++++ ++Q+     D
Sbjct: 554 LGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSREGRINKVIQMFDNIQDTTIRSD 613

Query: 535 KVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYE 594
            V Y+ V+  L   G  + A    A M     VP+E  Y +L+      G V++A E   
Sbjct: 614 AVLYNAVISSLCKRGETERAIEFLAYMVSSGCVPNESTYTILIRGLASEGFVKEAQEMLT 673

Query: 595 AMLQAG 600
            +   G
Sbjct: 674 ELCSKG 679



 Score = 96.7 bits (239), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 109/493 (22%), Positives = 188/493 (38%), Gaps = 79/493 (16%)

Query: 363 YTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQ 422
           Y  MV    RA Q  +  +L   +      PN  TY  ++ +      + +AL V  +M 
Sbjct: 130 YNAMVAGYCRAGQLESARRLAAAV---PVPPNAYTYFPVVRALCARGRIADALAVLDEMP 186

Query: 423 VVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQ 482
             GC P    Y  +++   + G    A+ + + + A G + D    ++++N +   G + 
Sbjct: 187 RRGCAPIPPMYHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSVD 246

Query: 483 AAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVM 542
            A  L  ++ + GC P++V+YN ++     A+ +    +L  +M      P+ VT++ ++
Sbjct: 247 EALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLI 306

Query: 543 EVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLR 602
             L   G  +    V A+M      PD  +Y  ++D   K G++  A E    M   GL+
Sbjct: 307 SYLCRNGLFERVHEVLAQMVEHGCTPDIRMYATIIDGICKEGHLEVAHEILNRMPSYGLK 366

Query: 603 PNVPTCNSLLSA-----------------------------------FLRVGQLSDAYHL 627
           PNV   N+LL                                     F + G +     L
Sbjct: 367 PNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIEL 426

Query: 628 LQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGFCHELMAVSGHPAHMFLLSMPSPGPDG 687
           L+ ML  G  P + TYT +++           GFC E +      A M L SM + G   
Sbjct: 427 LEQMLEHGCMPDVITYTTVIN-----------GFCKEGLI---DEAVMLLKSMTACGCKP 472

Query: 688 QN-----VRDHVGSFLEMMHSEDRES---KRGL------VDAVVDFLHKSGLKEEAGSVW 733
                  V   + S    + +ED  S   ++G        + +++FL K GL E+A  + 
Sbjct: 473 NTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIELL 532

Query: 734 EVAAQKNVYPDAVKEKGMSYWLINLHVMSDGTAVIALSRTLAWFRKQMLISGVGPSRI-- 791
           +        PD          LI+   + DG      +         M+  G+ P+ I  
Sbjct: 533 KQMLVNGCSPD----------LISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIY 582

Query: 792 -DIVTGWGRRSRV 803
             I +   R  R+
Sbjct: 583 SSIASALSREGRI 595



 Score = 95.1 bits (235), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 60/212 (28%), Positives = 100/212 (47%), Gaps = 35/212 (16%)

Query: 354 AGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNE 413
            G K +  +YT ++  L  A ++     L+ QM++ GC  N +T+N LI+   +   + +
Sbjct: 468 CGCKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQ 527

Query: 414 ALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIIN 473
           A+++ KQM V GC PD ++Y T+ID   KAG  D A+++   M   G+SP+T  YS I +
Sbjct: 528 AIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIAS 587

Query: 474 CLGKAGHLQAAHQLF----------------------CE-------------MVNQGCIP 498
            L + G +    Q+F                      C+             MV+ GC+P
Sbjct: 588 ALSREGRINKVIQMFDNIQDTTIRSDAVLYNAVISSLCKRGETERAIEFLAYMVSSGCVP 647

Query: 499 NLVTYNIMIALQAKARNYQSALKLYRDMQNAG 530
           N  TY I+I   A     + A ++  ++ + G
Sbjct: 648 NESTYTILIRGLASEGFVKEAQEMLTELCSKG 679



 Score = 50.4 bits (119), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 85/392 (21%), Positives = 132/392 (33%), Gaps = 97/392 (24%)

Query: 503 YNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMR 562
           YN M+A   +A   +SA +L   +      P+  TY  V+  L   G + +A AV  EM 
Sbjct: 130 YNAMVAGYCRAGQLESARRLAAAVP---VPPNAYTYFPVVRALCARGRIADALAVLDEMP 186

Query: 563 RKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLS 622
           R+   P  P+Y ++++   + G  R A    E +   G   +V  CN +L+A    G + 
Sbjct: 187 RRGCAPIPPMYHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSVD 246

Query: 623 DAYHLL-----------------------------------QGMLNLGLKPSLQTYTLLL 647
           +A HLL                                   + M+ +   P++ T+  L+
Sbjct: 247 EALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLI 306

Query: 648 S--C-------------------CTEARSPYDM---GFCHELMAVSGH--PAHMFLLSMP 681
           S  C                   CT     Y     G C E     GH   AH  L  MP
Sbjct: 307 SYLCRNGLFERVHEVLAQMVEHGCTPDIRMYATIIDGICKE-----GHLEVAHEILNRMP 361

Query: 682 SPGPDGQNVR--------------DHVGSFLEMMHSEDRESKRGLVDAVVDFLHKSGLKE 727
           S G     V               +     L  M  +D        + +VDF  ++GL +
Sbjct: 362 SYGLKPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVD 421

Query: 728 EAGSVWEVAAQKNVYPDAVKEKGMSYWLINLHVMSDGTAVIALSRTLAWFRKQMLISGVG 787
               + E   +    PD          +I    + +G     L        K M   G  
Sbjct: 422 RVIELLEQMLEHGCMPD----------VITYTTVINGFCKEGLIDEAVMLLKSMTACGCK 471

Query: 788 PSRID---IVTGWGRRSR-VTGTSLVRQAVQE 815
           P+ I    ++ G     R V    L+ Q +Q+
Sbjct: 472 PNTISYTIVLKGLCSAERWVDAEDLMSQMIQQ 503


>gi|357515141|ref|XP_003627859.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355521881|gb|AET02335.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 731

 Score =  148 bits (374), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 89/287 (31%), Positives = 149/287 (51%), Gaps = 2/287 (0%)

Query: 361 HTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQ 420
           H  T ++  L +      + K+  +MV+DG  PN+  YN LIH+  ++  +  A  +  +
Sbjct: 166 HACTVLMNSLLKDGITSMVWKVYKRMVQDGVVPNIYVYNCLIHACSKSRDVERAEFILNE 225

Query: 421 MQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGH 480
           M+V G  PD  TY TLI ++ K G    A+ +  KM+  G++ D  +Y+ +I    K G 
Sbjct: 226 MEVKGVVPDIFTYNTLIALYCKKGLHYEALSVQDKMEREGINLDIVSYNSLIYGFCKEGK 285

Query: 481 LQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSI 540
           ++ A ++F E+  +  IPN VTY  +I    KA  ++ AL+L   M   G  P  VTY+ 
Sbjct: 286 MREAMRMFGEI--KDAIPNHVTYTTLIDGYCKANEFEEALRLREMMVAKGLYPGVVTYNS 343

Query: 541 VMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAG 600
           ++  L   G + +A  +  EM  +    D      L++ + K G++  A ++   ML+AG
Sbjct: 344 ILRKLCSDGRIRDANKLLHEMSERKVQADSVTCNTLINAYCKIGDLNSALKFKTKMLEAG 403

Query: 601 LRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
           L PN  T  +L+  F +  +L  A  LL GML+ G  P+ +TY+ ++
Sbjct: 404 LTPNSFTYKALIHGFCKTSELESAKELLFGMLDAGFSPNYRTYSWIV 450



 Score =  136 bits (343), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 97/363 (26%), Positives = 170/363 (46%), Gaps = 30/363 (8%)

Query: 292 ASTGNVVESVSRILRQWKWGPLAEEALGNTNYSMDAYQANQVLKQLQDHT----VALGFF 347
            S  +++ESV  I+ +  W  L +    +T   + +   +QV+  L+ H         FF
Sbjct: 9   TSNKHLIESVCAIIVKGDWNNLLKPKTAST---LTSTTIHQVILHLKQHRYEPFFIFHFF 65

Query: 348 NWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGC--QPNVVTYNRLIHS- 404
            W +    + H  H+  +M+ +L + R F    ++LD+M +      P+V+T    IH  
Sbjct: 66  KWAQSIPHYTHSLHSSWSMIHMLTKHRHFKTAQQVLDKMAQREILSSPSVLTSLVRIHDD 125

Query: 405 --------------YGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAM 450
                         Y ++   ++A+ VF+QM +   +P       L++   K G   +  
Sbjct: 126 PEVNSHVLSWIVIHYAKSKMTHDAVQVFEQMSLCNLKPHLHACTVLMNSLLKDGITSMVW 185

Query: 451 DMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQ 510
            +YK+M   G+ P+ + Y+ +I+   K+  ++ A  +  EM  +G +P++ TYN +IAL 
Sbjct: 186 KVYKRMVQDGVVPNIYVYNCLIHACSKSRDVERAEFILNEMEVKGVVPDIFTYNTLIALY 245

Query: 511 AKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHC--GYLDEAEAVFAEMRRKNWVP 568
            K   +  AL +   M+  G   D V+Y+ +  + G C  G + EA  +F E+  K+ +P
Sbjct: 246 CKKGLHYEALSVQDKMEREGINLDIVSYNSL--IYGFCKEGKMREAMRMFGEI--KDAIP 301

Query: 569 DEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLL 628
           +   Y  L+D + KA    +A    E M+  GL P V T NS+L      G++ DA  LL
Sbjct: 302 NHVTYTTLIDGYCKANEFEEALRLREMMVAKGLYPGVVTYNSILRKLCSDGRIRDANKLL 361

Query: 629 QGM 631
             M
Sbjct: 362 HEM 364



 Score =  108 bits (270), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 77/288 (26%), Positives = 131/288 (45%), Gaps = 2/288 (0%)

Query: 359 DEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVF 418
           D  TY T++ +  +         + D+M R+G   ++V+YN LI+ + +   + EA+ +F
Sbjct: 234 DIFTYNTLIALYCKKGLHYEALSVQDKMEREGINLDIVSYNSLIYGFCKEGKMREAMRMF 293

Query: 419 KQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKA 478
            +++     P+ VTY TLID + KA   + A+ + + M A GL P   TY+ I+  L   
Sbjct: 294 GEIK--DAIPNHVTYTTLIDGYCKANEFEEALRLREMMVAKGLYPGVVTYNSILRKLCSD 351

Query: 479 GHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTY 538
           G ++ A++L  EM  +    + VT N +I    K  +  SALK    M  AG  P+  TY
Sbjct: 352 GRIRDANKLLHEMSERKVQADSVTCNTLINAYCKIGDLNSALKFKTKMLEAGLTPNSFTY 411

Query: 539 SIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQ 598
             ++        L+ A+ +   M    + P+   Y  +VD + K  N        +  L 
Sbjct: 412 KALIHGFCKTSELESAKELLFGMLDAGFSPNYRTYSWIVDSYCKKDNTDAVLALPDEFLS 471

Query: 599 AGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLL 646
            G   N+    +L+    ++ ++  A  LL  M   G+      YT L
Sbjct: 472 KGFCLNISLYRALIRRLCKIERIECAEKLLYHMEGKGISGDSVIYTSL 519



 Score =  103 bits (257), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 75/255 (29%), Positives = 119/255 (46%), Gaps = 2/255 (0%)

Query: 362 TYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQM 421
           TYTT++    +A +F    +L + MV  G  P VVTYN ++        + +A  +  +M
Sbjct: 305 TYTTLIDGYCKANEFEEALRLREMMVAKGLYPGVVTYNSILRKLCSDGRIRDANKLLHEM 364

Query: 422 QVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHL 481
                + D VT  TLI+ + K G L+ A+    KM  AGL+P++FTY  +I+   K   L
Sbjct: 365 SERKVQADSVTCNTLINAYCKIGDLNSALKFKTKMLEAGLTPNSFTYKALIHGFCKTSEL 424

Query: 482 QAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIV 541
           ++A +L   M++ G  PN  TY+ ++    K  N  + L L  +  + GF  +   Y  +
Sbjct: 425 ESAKELLFGMLDAGFSPNYRTYSWIVDSYCKKDNTDAVLALPDEFLSKGFCLNISLYRAL 484

Query: 542 MEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGL 601
           +  L     ++ AE +   M  K    D  +Y  L   + K+GN   A +  E M +  L
Sbjct: 485 IRRLCKIERIECAEKLLYHMEGKGISGDSVIYTSLAFSYWKSGNTNAASDMLEEMARRRL 544

Query: 602 RPNVPT--CNSLLSA 614
              V    C S L A
Sbjct: 545 MITVKIYRCFSALDA 559



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 38/168 (22%), Positives = 69/168 (41%)

Query: 359 DEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVF 418
           D  T  T++    +     +  K   +M+  G  PN  TY  LIH + + + L  A ++ 
Sbjct: 372 DSVTCNTLINAYCKIGDLNSALKFKTKMLEAGLTPNSFTYKALIHGFCKTSELESAKELL 431

Query: 419 KQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKA 478
             M   G  P+  TY  ++D + K    D  + +  +  + G   +   Y  +I  L K 
Sbjct: 432 FGMLDAGFSPNYRTYSWIVDSYCKKDNTDAVLALPDEFLSKGFCLNISLYRALIRRLCKI 491

Query: 479 GHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDM 526
             ++ A +L   M  +G   + V Y  +     K+ N  +A  +  +M
Sbjct: 492 ERIECAEKLLYHMEGKGISGDSVIYTSLAFSYWKSGNTNAASDMLEEM 539



 Score = 43.9 bits (102), Expect = 0.37,   Method: Compositional matrix adjust.
 Identities = 41/202 (20%), Positives = 87/202 (43%), Gaps = 18/202 (8%)

Query: 471 IINCLGKAGHLQAAHQLFCEMVNQGCI--PNLVTYNI---------------MIALQAKA 513
           +I+ L K  H + A Q+  +M  +  +  P+++T  +               ++   AK+
Sbjct: 84  MIHMLTKHRHFKTAQQVLDKMAQREILSSPSVLTSLVRIHDDPEVNSHVLSWIVIHYAKS 143

Query: 514 RNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVY 573
           +    A++++  M     +P     +++M  L   G       V+  M +   VP+  VY
Sbjct: 144 KMTHDAVQVFEQMSLCNLKPHLHACTVLMNSLLKDGITSMVWKVYKRMVQDGVVPNIYVY 203

Query: 574 GLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLN 633
             L+    K+ +V +A      M   G+ P++ T N+L++ + + G   +A  +   M  
Sbjct: 204 NCLIHACSKSRDVERAEFILNEMEVKGVVPDIFTYNTLIALYCKKGLHYEALSVQDKMER 263

Query: 634 LGLKPSLQTY-TLLLSCCTEAR 654
            G+   + +Y +L+   C E +
Sbjct: 264 EGINLDIVSYNSLIYGFCKEGK 285


>gi|357473123|ref|XP_003606846.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355507901|gb|AES89043.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 624

 Score =  148 bits (374), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 79/267 (29%), Positives = 143/267 (53%), Gaps = 4/267 (1%)

Query: 384 DQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKA 443
           D+M+  G   +V TYN LIH+      + EA D+ K+M+  G EPD VTY   I+ + + 
Sbjct: 346 DEMMNRGIVASVFTYNLLIHALFLEKRIEEAEDMIKEMREKGVEPDVVTYNIQINGYCRC 405

Query: 444 GFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTY 503
           G    A+ ++ +M    + P   TY+ +I+  GK   +  A + F + + +G +P+++ +
Sbjct: 406 GNAKKALSLFDEMVEKNIRPTVETYTSLIDVFGKRNRMSEAEEKFKKSIKEGMLPDIIMF 465

Query: 504 NIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHC--GYLDEAEAVFAEM 561
           N +I       N   A +L ++M NA   PD+VT++ +M+  G+C    ++EA+ +  EM
Sbjct: 466 NALIDGHCVNGNIDRAFQLLKEMDNAKVVPDEVTFNTLMQ--GYCRERKVEEAKKLLDEM 523

Query: 562 RRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQL 621
           + +   PD   Y  L+  + K G+++ A E ++ ML  G  P + T N+L+  + ++G+ 
Sbjct: 524 KERGIKPDHISYNTLISGYSKRGDMKDALEVFDEMLSLGFDPTLLTYNALIQGYSKIGEA 583

Query: 622 SDAYHLLQGMLNLGLKPSLQTYTLLLS 648
             A  LL+ M + G+ P   TY  ++ 
Sbjct: 584 DHAEELLREMQSKGITPDDSTYLYVIE 610



 Score =  146 bits (369), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 103/384 (26%), Positives = 179/384 (46%), Gaps = 2/384 (0%)

Query: 362 TYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQM 421
           T+  M+ IL R  ++      +  M   G +PNVVTYN +I+ Y        A  +FK M
Sbjct: 219 TFNIMINILCREGKWKKAKDFIGHMEVYGVKPNVVTYNTVINGYCLRGKFEAASKIFKTM 278

Query: 422 QVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHL 481
           +    +PD  TY + I    K   ++ A  +  K+  +GL P+  TY+ +I+     G L
Sbjct: 279 KDKNLKPDCYTYNSFISRLCKERRIEEASGVLCKLLESGLVPNAVTYNALIDGCCNKGDL 338

Query: 482 QAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIV 541
             A     EM+N+G + ++ TYN++I      +  + A  + ++M+  G EPD VTY+I 
Sbjct: 339 DKAFAYRDEMMNRGIVASVFTYNLLIHALFLEKRIEEAEDMIKEMREKGVEPDVVTYNIQ 398

Query: 542 MEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGL 601
           +     CG   +A ++F EM  KN  P    Y  L+D++GK   + +A E ++  ++ G+
Sbjct: 399 INGYCRCGNAKKALSLFDEMVEKNIRPTVETYTSLIDVFGKRNRMSEAEEKFKKSIKEGM 458

Query: 602 RPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTY-TLLLSCCTEARSPYDMG 660
            P++   N+L+      G +  A+ LL+ M N  + P   T+ TL+   C E +      
Sbjct: 459 LPDIIMFNALIDGHCVNGNIDRAFQLLKEMDNAKVVPDEVTFNTLMQGYCRERKVEEAKK 518

Query: 661 FCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRESKRGLVDAVVDFL 720
              E+      P H+   ++ S      +++D +  F EM+ S   +      +A++   
Sbjct: 519 LLDEMKERGIKPDHISYNTLISGYSKRGDMKDALEVFDEML-SLGFDPTLLTYNALIQGY 577

Query: 721 HKSGLKEEAGSVWEVAAQKNVYPD 744
            K G  + A  +      K + PD
Sbjct: 578 SKIGEADHAEELLREMQSKGITPD 601



 Score =  136 bits (343), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 74/264 (28%), Positives = 136/264 (51%)

Query: 384 DQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKA 443
           ++MV+   + ++VT+N +I+   R     +A D    M+V G +P+ VTY T+I+ +   
Sbjct: 206 EEMVKMNIKSSIVTFNIMINILCREGKWKKAKDFIGHMEVYGVKPNVVTYNTVINGYCLR 265

Query: 444 GFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTY 503
           G  + A  ++K M+   L PD +TY+  I+ L K   ++ A  + C+++  G +PN VTY
Sbjct: 266 GKFEAASKIFKTMKDKNLKPDCYTYNSFISRLCKERRIEEASGVLCKLLESGLVPNAVTY 325

Query: 504 NIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRR 563
           N +I       +   A     +M N G      TY++++  L     ++EAE +  EMR 
Sbjct: 326 NALIDGCCNKGDLDKAFAYRDEMMNRGIVASVFTYNLLIHALFLEKRIEEAEDMIKEMRE 385

Query: 564 KNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSD 623
           K   PD   Y + ++ + + GN +KA   ++ M++  +RP V T  SL+  F +  ++S+
Sbjct: 386 KGVEPDVVTYNIQINGYCRCGNAKKALSLFDEMVEKNIRPTVETYTSLIDVFGKRNRMSE 445

Query: 624 AYHLLQGMLNLGLKPSLQTYTLLL 647
           A    +  +  G+ P +  +  L+
Sbjct: 446 AEEKFKKSIKEGMLPDIIMFNALI 469



 Score =  132 bits (333), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 85/294 (28%), Positives = 142/294 (48%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           G K +  TY T++       +F A +K+   M     +P+  TYN  I    +   + EA
Sbjct: 247 GVKPNVVTYNTVINGYCLRGKFEAASKIFKTMKDKNLKPDCYTYNSFISRLCKERRIEEA 306

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
             V  ++   G  P+ VTY  LID     G LD A     +M   G+    FTY+++I+ 
Sbjct: 307 SGVLCKLLESGLVPNAVTYNALIDGCCNKGDLDKAFAYRDEMMNRGIVASVFTYNLLIHA 366

Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPD 534
           L     ++ A  +  EM  +G  P++VTYNI I    +  N + AL L+ +M      P 
Sbjct: 367 LFLEKRIEEAEDMIKEMREKGVEPDVVTYNIQINGYCRCGNAKKALSLFDEMVEKNIRPT 426

Query: 535 KVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYE 594
             TY+ +++V G    + EAE  F +  ++  +PD  ++  L+D     GN+ +A++  +
Sbjct: 427 VETYTSLIDVFGKRNRMSEAEEKFKKSIKEGMLPDIIMFNALIDGHCVNGNIDRAFQLLK 486

Query: 595 AMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
            M  A + P+  T N+L+  + R  ++ +A  LL  M   G+KP   +Y  L+S
Sbjct: 487 EMDNAKVVPDEVTFNTLMQGYCRERKVEEAKKLLDEMKERGIKPDHISYNTLIS 540



 Score =  118 bits (296), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 66/227 (29%), Positives = 117/227 (51%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           R+ G + D  TY   +    R         L D+MV    +P V TY  LI  +G+ N +
Sbjct: 384 REKGVEPDVVTYNIQINGYCRCGNAKKALSLFDEMVEKNIRPTVETYTSLIDVFGKRNRM 443

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
           +EA + FK+    G  PD + +  LID H   G +D A  + K+M  A + PD  T++ +
Sbjct: 444 SEAEEKFKKSIKEGMLPDIIMFNALIDGHCVNGNIDRAFQLLKEMDNAKVVPDEVTFNTL 503

Query: 472 INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF 531
           +    +   ++ A +L  EM  +G  P+ ++YN +I+  +K  + + AL+++ +M + GF
Sbjct: 504 MQGYCRERKVEEAKKLLDEMKERGIKPDHISYNTLISGYSKRGDMKDALEVFDEMLSLGF 563

Query: 532 EPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVD 578
           +P  +TY+ +++     G  D AE +  EM+ K   PD+  Y  +++
Sbjct: 564 DPTLLTYNALIQGYSKIGEADHAEELLREMQSKGITPDDSTYLYVIE 610



 Score =  116 bits (290), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 69/246 (28%), Positives = 116/246 (47%)

Query: 362 TYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQM 421
           TY  ++  L   ++      ++ +M   G +P+VVTYN  I+ Y R     +AL +F +M
Sbjct: 359 TYNLLIHALFLEKRIEEAEDMIKEMREKGVEPDVVTYNIQINGYCRCGNAKKALSLFDEM 418

Query: 422 QVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHL 481
                 P   TY +LID+  K   +  A + +KK    G+ PD   ++ +I+     G++
Sbjct: 419 VEKNIRPTVETYTSLIDVFGKRNRMSEAEEKFKKSIKEGMLPDIIMFNALIDGHCVNGNI 478

Query: 482 QAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIV 541
             A QL  EM N   +P+ VT+N ++    + R  + A KL  +M+  G +PD ++Y+ +
Sbjct: 479 DRAFQLLKEMDNAKVVPDEVTFNTLMQGYCRERKVEEAKKLLDEMKERGIKPDHISYNTL 538

Query: 542 MEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGL 601
           +      G + +A  VF EM    + P    Y  L+  + K G    A E    M   G+
Sbjct: 539 ISGYSKRGDMKDALEVFDEMLSLGFDPTLLTYNALIQGYSKIGEADHAEELLREMQSKGI 598

Query: 602 RPNVPT 607
            P+  T
Sbjct: 599 TPDDST 604



 Score =  101 bits (252), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 54/203 (26%), Positives = 106/203 (52%), Gaps = 1/203 (0%)

Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLI 402
           AL  F+ +  +   +    TYT+++ + G+  +     +   + +++G  P+++ +N LI
Sbjct: 411 ALSLFDEMV-EKNIRPTVETYTSLIDVFGKRNRMSEAEEKFKKSIKEGMLPDIIMFNALI 469

Query: 403 HSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLS 462
             +     ++ A  + K+M      PD VT+ TL+  + +   ++ A  +  +M+  G+ 
Sbjct: 470 DGHCVNGNIDRAFQLLKEMDNAKVVPDEVTFNTLMQGYCRERKVEEAKKLLDEMKERGIK 529

Query: 463 PDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKL 522
           PD  +Y+ +I+   K G ++ A ++F EM++ G  P L+TYN +I   +K      A +L
Sbjct: 530 PDHISYNTLISGYSKRGDMKDALEVFDEMLSLGFDPTLLTYNALIQGYSKIGEADHAEEL 589

Query: 523 YRDMQNAGFEPDKVTYSIVMEVL 545
            R+MQ+ G  PD  TY  V+E +
Sbjct: 590 LREMQSKGITPDDSTYLYVIEAM 612



 Score =  100 bits (249), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 62/231 (26%), Positives = 113/231 (48%)

Query: 417 VFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLG 476
           V+++M  +  +   VT+  +I+I  + G    A D    M+  G+ P+  TY+ +IN   
Sbjct: 204 VYEEMVKMNIKSSIVTFNIMINILCREGKWKKAKDFIGHMEVYGVKPNVVTYNTVINGYC 263

Query: 477 KAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKV 536
             G  +AA ++F  M ++   P+  TYN  I+   K R  + A  +   +  +G  P+ V
Sbjct: 264 LRGKFEAASKIFKTMKDKNLKPDCYTYNSFISRLCKERRIEEASGVLCKLLESGLVPNAV 323

Query: 537 TYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAM 596
           TY+ +++   + G LD+A A   EM  +  V     Y LL+        + +A +  + M
Sbjct: 324 TYNALIDGCCNKGDLDKAFAYRDEMMNRGIVASVFTYNLLIHALFLEKRIEEAEDMIKEM 383

Query: 597 LQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
            + G+ P+V T N  ++ + R G    A  L   M+   ++P+++TYT L+
Sbjct: 384 REKGVEPDVVTYNIQINGYCRCGNAKKALSLFDEMVEKNIRPTVETYTSLI 434



 Score = 92.0 bits (227), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 60/250 (24%), Positives = 122/250 (48%)

Query: 396 VTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKK 455
           + ++ L+ +Y +    +EAL+    M+     P   T  +L+ +  K   + +A  +Y++
Sbjct: 148 LVFDLLLSAYCQFRKPDEALECLNLMKENEIIPKTETCNSLLSLLLKLNKIKMAWFVYEE 207

Query: 456 MQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARN 515
           M    +     T++++IN L + G  + A      M   G  PN+VTYN +I        
Sbjct: 208 MVKMNIKSSIVTFNIMINILCREGKWKKAKDFIGHMEVYGVKPNVVTYNTVINGYCLRGK 267

Query: 516 YQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGL 575
           +++A K+++ M++   +PD  TY+  +  L     ++EA  V  ++     VP+   Y  
Sbjct: 268 FEAASKIFKTMKDKNLKPDCYTYNSFISRLCKERRIEEASGVLCKLLESGLVPNAVTYNA 327

Query: 576 LVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLG 635
           L+D     G++ KA+ + + M+  G+  +V T N L+ A     ++ +A  +++ M   G
Sbjct: 328 LIDGCCNKGDLDKAFAYRDEMMNRGIVASVFTYNLLIHALFLEKRIEEAEDMIKEMREKG 387

Query: 636 LKPSLQTYTL 645
           ++P + TY +
Sbjct: 388 VEPDVVTYNI 397



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 62/298 (20%), Positives = 124/298 (41%), Gaps = 37/298 (12%)

Query: 447 DVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIM 506
           D A++    M+   + P T T + +++ L K   ++ A  ++ EMV      ++VT+NIM
Sbjct: 164 DEALECLNLMKENEIIPKTETCNSLLSLLLKLNKIKMAWFVYEEMVKMNIKSSIVTFNIM 223

Query: 507 IALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNW 566
           I +  +   ++ A      M+  G +P+ VTY+ V+   G+C            +R    
Sbjct: 224 INILCREGKWKKAKDFIGHMEVYGVKPNVVTYNTVIN--GYC------------LR---- 265

Query: 567 VPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYH 626
                            G    A + ++ M    L+P+  T NS +S   +  ++ +A  
Sbjct: 266 -----------------GKFEAASKIFKTMKDKNLKPDCYTYNSFISRLCKERRIEEASG 308

Query: 627 LLQGMLNLGLKPSLQTYTLLLS-CCTEARSPYDMGFCHELMAVSGHPAHMFLLSMPSPGP 685
           +L  +L  GL P+  TY  L+  CC +        +  E+M   G  A +F  ++     
Sbjct: 309 VLCKLLESGLVPNAVTYNALIDGCCNKGDLDKAFAYRDEMMN-RGIVASVFTYNLLIHAL 367

Query: 686 DGQNVRDHVGSFLEMMHSEDRESKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYP 743
             +   +     ++ M  +  E      +  ++   + G  ++A S+++   +KN+ P
Sbjct: 368 FLEKRIEEAEDMIKEMREKGVEPDVVTYNIQINGYCRCGNAKKALSLFDEMVEKNIRP 425



 Score = 49.7 bits (117), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 55/261 (21%), Positives = 113/261 (43%), Gaps = 14/261 (5%)

Query: 493 NQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLD 552
           N+  +   + ++++++   + R    AL+    M+     P   T + ++ +L     + 
Sbjct: 140 NRLNVKTTLVFDLLLSAYCQFRKPDEALECLNLMKENEIIPKTETCNSLLSLLLKLNKIK 199

Query: 553 EAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLL 612
            A  V+ EM + N       + +++++  + G  +KA ++   M   G++PNV T N+++
Sbjct: 200 MAWFVYEEMVKMNIKSSIVTFNIMINILCREGKWKKAKDFIGHMEVYGVKPNVVTYNTVI 259

Query: 613 SAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS-CCTEARSPYDMGFCHELMAVSGH 671
           + +   G+   A  + + M +  LKP   TY   +S  C E R     G   +L+     
Sbjct: 260 NGYCLRGKFEAASKIFKTMKDKNLKPDCYTYNSFISRLCKERRIEEASGVLCKLLESGLV 319

Query: 672 PAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRESKRGLVDAVVDF---LHKSGLK-- 726
           P  +   ++     +  ++        EMM+       RG+V +V  +   +H   L+  
Sbjct: 320 PNAVTYNALIDGCCNKGDLDKAFAYRDEMMN-------RGIVASVFTYNLLIHALFLEKR 372

Query: 727 -EEAGSVWEVAAQKNVYPDAV 746
            EEA  + +   +K V PD V
Sbjct: 373 IEEAEDMIKEMREKGVEPDVV 393


>gi|356505993|ref|XP_003521773.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
           chloroplastic-like [Glycine max]
          Length = 570

 Score =  148 bits (374), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 83/298 (27%), Positives = 147/298 (49%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           +  GF  D  TY  ++G L       +  +  +Q++++ C+P VVTY  LI +      +
Sbjct: 153 KNKGFSPDIVTYNILIGSLCSRGMLDSALEFKNQLLKENCKPTVVTYTILIEATLLQGGI 212

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
           +EA+ +  +M  +  +PD  TY ++I    + G++D A  +   + + G +PD  TY+++
Sbjct: 213 DEAMKLLDEMLEINLQPDMFTYNSIIRGMCREGYVDRAFQIISSISSKGYAPDVITYNIL 272

Query: 472 INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF 531
           +  L   G  +A ++L  +MV +GC  N+VTY+++I+   +    +  + L +DM+  G 
Sbjct: 273 LRGLLNQGKWEAGYELMSDMVARGCEANVVTYSVLISSVCRDGKVEEGVGLLKDMKKKGL 332

Query: 532 EPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWE 591
           +PD   Y  ++  L   G +D A  V   M     VPD   Y  ++    K     +A  
Sbjct: 333 KPDGYCYDPLIAALCKEGRVDLAIEVLDVMISDGCVPDIVNYNTILACLCKQKRADEALS 392

Query: 592 WYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSC 649
            +E + + G  PN  + NS+ SA    G    A  ++  ML+ G+ P   TY  L+SC
Sbjct: 393 IFEKLGEVGCSPNASSYNSMFSALWSTGHKVRALGMILEMLDKGVDPDGITYNSLISC 450



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 81/290 (27%), Positives = 145/290 (50%)

Query: 359 DEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVF 418
           D   Y  ++    RA +  +  ++LD+M   G  P++VTYN LI S      L+ AL+  
Sbjct: 125 DLIAYNAIITGFCRANRIDSAYQVLDRMKNKGFSPDIVTYNILIGSLCSRGMLDSALEFK 184

Query: 419 KQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKA 478
            Q+    C+P  VTY  LI+     G +D AM +  +M    L PD FTY+ II  + + 
Sbjct: 185 NQLLKENCKPTVVTYTILIEATLLQGGIDEAMKLLDEMLEINLQPDMFTYNSIIRGMCRE 244

Query: 479 GHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTY 538
           G++  A Q+   + ++G  P+++TYNI++        +++  +L  DM   G E + VTY
Sbjct: 245 GYVDRAFQIISSISSKGYAPDVITYNILLRGLLNQGKWEAGYELMSDMVARGCEANVVTY 304

Query: 539 SIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQ 598
           S+++  +   G ++E   +  +M++K   PD   Y  L+    K G V  A E  + M+ 
Sbjct: 305 SVLISSVCRDGKVEEGVGLLKDMKKKGLKPDGYCYDPLIAALCKEGRVDLAIEVLDVMIS 364

Query: 599 AGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
            G  P++   N++L+   +  +  +A  + + +  +G  P+  +Y  + S
Sbjct: 365 DGCVPDIVNYNTILACLCKQKRADEALSIFEKLGEVGCSPNASSYNSMFS 414



 Score =  130 bits (327), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 83/295 (28%), Positives = 142/295 (48%), Gaps = 5/295 (1%)

Query: 364 TTMVGILGRARQFGAINK---LLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQ 420
           T ++  L R+ + G  N+    L  +V  G +P+VV   +LIH    +  +++A+ V   
Sbjct: 58  THLLKSLSRSCKAGNFNESLYFLRHLVNKGHKPDVVLCTKLIHGLFTSKTIDKAIQVMHI 117

Query: 421 MQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGH 480
           ++  G  PD + Y  +I    +A  +D A  +  +M+  G SPD  TY+++I  L   G 
Sbjct: 118 LENHG-HPDLIAYNAIITGFCRANRIDSAYQVLDRMKNKGFSPDIVTYNILIGSLCSRGM 176

Query: 481 LQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSI 540
           L +A +   +++ + C P +VTY I+I           A+KL  +M     +PD  TY+ 
Sbjct: 177 LDSALEFKNQLLKENCKPTVVTYTILIEATLLQGGIDEAMKLLDEMLEINLQPDMFTYNS 236

Query: 541 VMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAG 600
           ++  +   GY+D A  + + +  K + PD   Y +L+      G     +E    M+  G
Sbjct: 237 IIRGMCREGYVDRAFQIISSISSKGYAPDVITYNILLRGLLNQGKWEAGYELMSDMVARG 296

Query: 601 LRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYT-LLLSCCTEAR 654
              NV T + L+S+  R G++ +   LL+ M   GLKP    Y  L+ + C E R
Sbjct: 297 CEANVVTYSVLISSVCRDGKVEEGVGLLKDMKKKGLKPDGYCYDPLIAALCKEGR 351



 Score =  129 bits (323), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 98/385 (25%), Positives = 163/385 (42%), Gaps = 47/385 (12%)

Query: 316 EALGNTNYSMDAYQANQVLKQLQDHTV---ALGFFNWLRRQAGFKHDEHTYTTMVGILGR 372
           + + N  +S D    N ++  L    +   AL F N L ++   K    TYT ++     
Sbjct: 150 DRMKNKGFSPDIVTYNILIGSLCSRGMLDSALEFKNQLLKE-NCKPTVVTYTILIEATLL 208

Query: 373 ARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFK------------- 419
                   KLLD+M+    QP++ TYN +I    R  Y++ A  +               
Sbjct: 209 QGGIDEAMKLLDEMLEINLQPDMFTYNSIIRGMCREGYVDRAFQIISSISSKGYAPDVIT 268

Query: 420 ----------------------QMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQ 457
                                  M   GCE + VTY  LI    + G ++  + + K M+
Sbjct: 269 YNILLRGLLNQGKWEAGYELMSDMVARGCEANVVTYSVLISSVCRDGKVEEGVGLLKDMK 328

Query: 458 AAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQ 517
             GL PD + Y  +I  L K G +  A ++   M++ GC+P++V YN ++A   K +   
Sbjct: 329 KKGLKPDGYCYDPLIAALCKEGRVDLAIEVLDVMISDGCVPDIVNYNTILACLCKQKRAD 388

Query: 518 SALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLV 577
            AL ++  +   G  P+  +Y+ +   L   G+   A  +  EM  K   PD   Y  L+
Sbjct: 389 EALSIFEKLGEVGCSPNASSYNSMFSALWSTGHKVRALGMILEMLDKGVDPDGITYNSLI 448

Query: 578 DLWGKAGNVRKAWEWY--EAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLG 635
               + G V +A E      M  +  +P+V + N +L    +V ++SDA  +L  M++ G
Sbjct: 449 SCLCRDGMVDEAIELLVDMEMESSECKPSVVSYNIVLLGLCKVSRVSDAIEVLAAMVDKG 508

Query: 636 LKPSLQTYTLLLS------CCTEAR 654
            +P+  TYT L+       C  +AR
Sbjct: 509 CRPNETTYTFLIEGIGFGGCLNDAR 533



 Score =  124 bits (312), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 86/282 (30%), Positives = 133/282 (47%), Gaps = 2/282 (0%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           G+  D  TY  ++  L    ++ A  +L+  MV  GC+ NVVTY+ LI S  R   + E 
Sbjct: 261 GYAPDVITYNILLRGLLNQGKWEAGYELMSDMVARGCEANVVTYSVLISSVCRDGKVEEG 320

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
           + + K M+  G +PD   Y  LI    K G +D+A+++   M + G  PD   Y+ I+ C
Sbjct: 321 VGLLKDMKKKGLKPDGYCYDPLIAALCKEGRVDLAIEVLDVMISDGCVPDIVNYNTILAC 380

Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPD 534
           L K      A  +F ++   GC PN  +YN M +      +   AL +  +M + G +PD
Sbjct: 381 LCKQKRADEALSIFEKLGEVGCSPNASSYNSMFSALWSTGHKVRALGMILEMLDKGVDPD 440

Query: 535 KVTYSIVMEVLGHCGYLDEAEAVFA--EMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEW 592
            +TY+ ++  L   G +DEA  +    EM      P    Y +++    K   V  A E 
Sbjct: 441 GITYNSLISCLCRDGMVDEAIELLVDMEMESSECKPSVVSYNIVLLGLCKVSRVSDAIEV 500

Query: 593 YEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNL 634
             AM+  G RPN  T   L+      G L+DA  L   ++N+
Sbjct: 501 LAAMVDKGCRPNETTYTFLIEGIGFGGCLNDARDLATTLVNM 542



 Score =  115 bits (289), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 93/385 (24%), Positives = 175/385 (45%), Gaps = 12/385 (3%)

Query: 392 QPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMD 451
            P+++ YN +I  + RAN ++ A  V  +M+  G  PD VTY  LI      G LD A++
Sbjct: 123 HPDLIAYNAIITGFCRANRIDSAYQVLDRMKNKGFSPDIVTYNILIGSLCSRGMLDSALE 182

Query: 452 MYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQA 511
              ++      P   TY+++I      G +  A +L  EM+     P++ TYN +I    
Sbjct: 183 FKNQLLKENCKPTVVTYTILIEATLLQGGIDEAMKLLDEMLEINLQPDMFTYNSIIRGMC 242

Query: 512 KARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEP 571
           +      A ++   + + G+ PD +TY+I++  L + G  +    + ++M  +    +  
Sbjct: 243 REGYVDRAFQIISSISSKGYAPDVITYNILLRGLLNQGKWEAGYELMSDMVARGCEANVV 302

Query: 572 VYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGM 631
            Y +L+    + G V +     + M + GL+P+    + L++A  + G++  A  +L  M
Sbjct: 303 TYSVLISSVCRDGKVEEGVGLLKDMKKKGLKPDGYCYDPLIAALCKEGRVDLAIEVLDVM 362

Query: 632 LNLGLKPSLQTYTLLLSC-CTEARSPYDMGFCHELMAVSGHPAHMFLLSMPSPG-PDGQN 689
           ++ G  P +  Y  +L+C C + R+   +    +L  V   P      SM S     G  
Sbjct: 363 ISDGCVPDIVNYNTILACLCKQKRADEALSIFEKLGEVGCSPNASSYNSMFSALWSTGHK 422

Query: 690 VRDHVGSFLEMMHSEDRESKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAVKEK 749
           VR  +G  LEM+  +  +      ++++  L + G+ +EA    E+     +     K  
Sbjct: 423 VR-ALGMILEML-DKGVDPDGITYNSLISCLCRDGMVDEA---IELLVDMEMESSECKPS 477

Query: 750 GMSYWLINLHV-----MSDGTAVIA 769
            +SY ++ L +     +SD   V+A
Sbjct: 478 VVSYNIVLLGLCKVSRVSDAIEVLA 502



 Score = 57.0 bits (136), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 44/161 (27%), Positives = 74/161 (45%), Gaps = 11/161 (6%)

Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGIL----GRARQFGAINKLLDQMVRDGCQPNVVTY 398
           AL  F  L  + G   +  +Y +M   L     + R  G I ++LD+    G  P+ +TY
Sbjct: 390 ALSIFEKLG-EVGCSPNASSYNSMFSALWSTGHKVRALGMILEMLDK----GVDPDGITY 444

Query: 399 NRLIHSYGRANYLNEALDVFKQMQVVG--CEPDRVTYCTLIDIHAKAGFLDVAMDMYKKM 456
           N LI    R   ++EA+++   M++    C+P  V+Y  ++    K   +  A+++   M
Sbjct: 445 NSLISCLCRDGMVDEAIELLVDMEMESSECKPSVVSYNIVLLGLCKVSRVSDAIEVLAAM 504

Query: 457 QAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCI 497
              G  P+  TY+ +I  +G  G L  A  L   +VN   I
Sbjct: 505 VDKGCRPNETTYTFLIEGIGFGGCLNDARDLATTLVNMDAI 545


>gi|255660778|gb|ACU25558.1| pentatricopeptide repeat-containing protein [Verbena bracteata]
          Length = 418

 Score =  148 bits (374), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 84/279 (30%), Positives = 152/279 (54%)

Query: 370 LGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPD 429
           L + + F  +    ++ +  G   ++  +N L+HS+ +   +  A  VF  +      P 
Sbjct: 111 LMKLKYFKLVWGFYEESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPS 170

Query: 430 RVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFC 489
            V++ TL++ + K G LD    +   MQA+G+ PD +TYSV+IN L K   +  A++LF 
Sbjct: 171 VVSFNTLMNGYIKLGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFD 230

Query: 490 EMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCG 549
           EM++ G +PN VT+  +I    K      A+++Y+ M +    PD +TY+ ++  L   G
Sbjct: 231 EMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKG 290

Query: 550 YLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCN 609
            L +A+ +  EM  K   PD+  Y  L+D   K G++  A+E+ + M++  +R +     
Sbjct: 291 DLKQAQDLIDEMSMKGLKPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYT 350

Query: 610 SLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
           +L+S   + G+  DA  +L+ ML++GLKP + TYT++++
Sbjct: 351 ALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIIN 389



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 79/316 (25%), Positives = 154/316 (48%), Gaps = 10/316 (3%)

Query: 335 KQLQDHTVALGFFNWL------RRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVR 388
           +++ +H + L +F  +        + G+    + +  ++    +  +      + D + +
Sbjct: 105 RKVLEHLMKLKYFKLVWGFYEESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITK 164

Query: 389 DGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDV 448
              +P+VV++N L++ Y +   L+E   +   MQ  G +PD  TY  LI+   K   +D 
Sbjct: 165 WSLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDD 224

Query: 449 AMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIA 508
           A +++ +M   GL P+  T++ +I+   K G +  A +++ +M++Q   P+L+TYN +I 
Sbjct: 225 ANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIY 284

Query: 509 LQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHC--GYLDEAEAVFAEMRRKNW 566
              K  + + A  L  +M   G +PDK+TY+ +++  G+C  G L+ A      M ++N 
Sbjct: 285 GLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLID--GNCKEGDLETAFEYRKRMIKENI 342

Query: 567 VPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYH 626
             D+  Y  L+    + G    A +    ML  GL+P + T   +++ F + G +     
Sbjct: 343 RLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSK 402

Query: 627 LLQGMLNLGLKPSLQT 642
           LL+ M   G  PS+ T
Sbjct: 403 LLKEMQRDGYMPSVVT 418



 Score = 53.5 bits (127), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 33/139 (23%), Positives = 69/139 (49%), Gaps = 1/139 (0%)

Query: 517 QSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLL 576
           + A++ YR  +   F     T   V+E L    Y       + E     +      + +L
Sbjct: 83  RDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFYEESLECGYPASLYFFNIL 142

Query: 577 VDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGL 636
           +  + K G +R A   ++A+ +  LRP+V + N+L++ ++++G L + + L   M   G+
Sbjct: 143 MHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQASGV 202

Query: 637 KPSLQTYTLLLS-CCTEAR 654
           +P + TY++L++  C E++
Sbjct: 203 QPDVYTYSVLINGLCKESK 221


>gi|357499119|ref|XP_003619848.1| CCP [Medicago truncatula]
 gi|355494863|gb|AES76066.1| CCP [Medicago truncatula]
          Length = 556

 Score =  148 bits (374), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 90/295 (30%), Positives = 154/295 (52%), Gaps = 2/295 (0%)

Query: 355 GFKHDEHTYTTMV-GILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNE 413
           G   DE  Y T++ G+    R   A  +LL +M     +PN+V YN +I S+ +     +
Sbjct: 184 GMLLDEVCYGTLINGLCKIGRSIDAF-QLLQEMEGQVVKPNIVIYNMIIDSFCKDELTCK 242

Query: 414 ALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIIN 473
           A D++ ++  +G +PD +TY +LI    + G       +  +M    ++P+ +T++V+I+
Sbjct: 243 ARDLYLKIVDMGIDPDILTYTSLIRGFCRTGQWGEVKQLMCEMVNKNINPNVYTFNVLID 302

Query: 474 CLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEP 533
              + G +  A  +F  MV +G  P++VT+N +I+      N   A KL+  +   G  P
Sbjct: 303 AFCRKGKMIEAQGMFNLMVKRGQQPDIVTFNTLISGHCLHGNVLEARKLFDTVFERGILP 362

Query: 534 DKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWY 593
           D  +Y+I++     C  +DEA ++F EMR KN V D  +Y  L+D   K+G +  AWE +
Sbjct: 363 DVWSYTILIIGYCKCKRIDEAVSLFNEMRCKNMVLDIVLYSSLIDGLCKSGRISYAWELF 422

Query: 594 EAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
             +   G  PNV T N L+ AF ++  +     L + M   GL P++ TY +L++
Sbjct: 423 STINNDGPPPNVITYNILIDAFCKIQDIDMGIELFKLMCGKGLTPTVLTYNILIN 477



 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 89/300 (29%), Positives = 141/300 (47%), Gaps = 39/300 (13%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           G   D  TYT+++    R  Q+G + +L+ +MV     PNV T+N LI ++ R   + EA
Sbjct: 254 GIDPDILTYTSLIRGFCRTGQWGEVKQLMCEMVNKNINPNVYTFNVLIDAFCRKGKMIEA 313

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIH---------------------------------- 440
             +F  M   G +PD VT+ TLI  H                                  
Sbjct: 314 QGMFNLMVKRGQQPDIVTFNTLISGHCLHGNVLEARKLFDTVFERGILPDVWSYTILIIG 373

Query: 441 -AKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPN 499
             K   +D A+ ++ +M+   +  D   YS +I+ L K+G +  A +LF  + N G  PN
Sbjct: 374 YCKCKRIDEAVSLFNEMRCKNMVLDIVLYSSLIDGLCKSGRISYAWELFSTINNDGPPPN 433

Query: 500 LVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHC--GYLDEAEAV 557
           ++TYNI+I    K ++    ++L++ M   G  P  +TY+I++   G+C    + EA  +
Sbjct: 434 VITYNILIDAFCKIQDIDMGIELFKLMCGKGLTPTVLTYNILIN--GYCKSKRIREAMNL 491

Query: 558 FAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLR 617
            + M+ KN  PD   Y  L D   K+G +  AWE ++ M   G   +V T N LL AF +
Sbjct: 492 LSVMQSKNLAPDSITYNSLFDGLCKSGRISDAWELFKVMHVGGPPVDVATYNVLLDAFCK 551



 Score =  119 bits (299), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 78/285 (27%), Positives = 136/285 (47%)

Query: 363 YTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQ 422
           + T++G + + +       LL QMV  G  P++ T +  I+ Y     +  A  V   + 
Sbjct: 87  FNTIIGSVVKMKHCPVAISLLKQMVFKGVTPSIFTLSIWINCYCHLGEMGFAFSVLGIVL 146

Query: 423 VVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQ 482
             G +P+ +T  T++      G +  AMD +  + A G+  D   Y  +IN L K G   
Sbjct: 147 KRGYQPNNITLTTVMKGLCINGEVQKAMDFHDNVAAQGMLLDEVCYGTLINGLCKIGRSI 206

Query: 483 AAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVM 542
            A QL  EM  Q   PN+V YN++I    K      A  LY  + + G +PD +TY+ ++
Sbjct: 207 DAFQLLQEMEGQVVKPNIVIYNMIIDSFCKDELTCKARDLYLKIVDMGIDPDILTYTSLI 266

Query: 543 EVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLR 602
                 G   E + +  EM  KN  P+   + +L+D + + G + +A   +  M++ G +
Sbjct: 267 RGFCRTGQWGEVKQLMCEMVNKNINPNVYTFNVLIDAFCRKGKMIEAQGMFNLMVKRGQQ 326

Query: 603 PNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
           P++ T N+L+S     G + +A  L   +   G+ P + +YT+L+
Sbjct: 327 PDIVTFNTLISGHCLHGNVLEARKLFDTVFERGILPDVWSYTILI 371



 Score =  107 bits (267), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 93/387 (24%), Positives = 168/387 (43%), Gaps = 25/387 (6%)

Query: 287 FSRHFASTGNVVESVSRILRQWKWGPLAEEALGNTNYSMDAYQANQVLKQLQDHTVALGF 346
           F  + A+ G +++ V        +G L    L     S+DA+Q   +L++++   V    
Sbjct: 176 FHDNVAAQGMLLDEVC-------YGTLIN-GLCKIGRSIDAFQ---LLQEMEGQVVKPNI 224

Query: 347 FNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYG 406
             +      F  DE T         +AR       L  ++V  G  P+++TY  LI  + 
Sbjct: 225 VIYNMIIDSFCKDELT--------CKARD------LYLKIVDMGIDPDILTYTSLIRGFC 270

Query: 407 RANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTF 466
           R     E   +  +M      P+  T+  LID   + G +  A  M+  M   G  PD  
Sbjct: 271 RTGQWGEVKQLMCEMVNKNINPNVYTFNVLIDAFCRKGKMIEAQGMFNLMVKRGQQPDIV 330

Query: 467 TYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDM 526
           T++ +I+     G++  A +LF  +  +G +P++ +Y I+I    K +    A+ L+ +M
Sbjct: 331 TFNTLISGHCLHGNVLEARKLFDTVFERGILPDVWSYTILIIGYCKCKRIDEAVSLFNEM 390

Query: 527 QNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNV 586
           +      D V YS +++ L   G +  A  +F+ +      P+   Y +L+D + K  ++
Sbjct: 391 RCKNMVLDIVLYSSLIDGLCKSGRISYAWELFSTINNDGPPPNVITYNILIDAFCKIQDI 450

Query: 587 RKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLL 646
               E ++ M   GL P V T N L++ + +  ++ +A +LL  M +  L P   TY  L
Sbjct: 451 DMGIELFKLMCGKGLTPTVLTYNILINGYCKSKRIREAMNLLSVMQSKNLAPDSITYNSL 510

Query: 647 LSCCTEARSPYDMGFCHELMAVSGHPA 673
                ++    D     ++M V G P 
Sbjct: 511 FDGLCKSGRISDAWELFKVMHVGGPPV 537



 Score =  105 bits (263), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 76/288 (26%), Positives = 136/288 (47%), Gaps = 10/288 (3%)

Query: 306 RQWKWGPLAEEA--LGNTNYSMDAYQANQVLKQL---QDHTVALGFFNWLRRQAGFKHDE 360
           R  +WG + +    + N N + + Y  N ++           A G FN + ++ G + D 
Sbjct: 271 RTGQWGEVKQLMCEMVNKNINPNVYTFNVLIDAFCRKGKMIEAQGMFNLMVKR-GQQPDI 329

Query: 361 HTYTTMVGILGRARQFGAIN--KLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVF 418
            T+ T++   G       +   KL D +   G  P+V +Y  LI  Y +   ++EA+ +F
Sbjct: 330 VTFNTLIS--GHCLHGNVLEARKLFDTVFERGILPDVWSYTILIIGYCKCKRIDEAVSLF 387

Query: 419 KQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKA 478
            +M+      D V Y +LID   K+G +  A +++  +   G  P+  TY+++I+   K 
Sbjct: 388 NEMRCKNMVLDIVLYSSLIDGLCKSGRISYAWELFSTINNDGPPPNVITYNILIDAFCKI 447

Query: 479 GHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTY 538
             +    +LF  M  +G  P ++TYNI+I    K++  + A+ L   MQ+    PD +TY
Sbjct: 448 QDIDMGIELFKLMCGKGLTPTVLTYNILINGYCKSKRIREAMNLLSVMQSKNLAPDSITY 507

Query: 539 SIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNV 586
           + + + L   G + +A  +F  M       D   Y +L+D + KA +V
Sbjct: 508 NSLFDGLCKSGRISDAWELFKVMHVGGPPVDVATYNVLLDAFCKAQDV 555



 Score = 89.7 bits (221), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 58/239 (24%), Positives = 114/239 (47%)

Query: 409 NYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTY 468
           N +++A+ +F  +  +   P  + + T+I    K     VA+ + K+M   G++P  FT 
Sbjct: 63  NGIDDAVTLFNHLINMQPLPSVIQFNTIIGSVVKMKHCPVAISLLKQMVFKGVTPSIFTL 122

Query: 469 SVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQN 528
           S+ INC    G +  A  +   ++ +G  PN +T   ++         Q A+  + ++  
Sbjct: 123 SIWINCYCHLGEMGFAFSVLGIVLKRGYQPNNITLTTVMKGLCINGEVQKAMDFHDNVAA 182

Query: 529 AGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRK 588
            G   D+V Y  ++  L   G   +A  +  EM  +   P+  +Y +++D + K     K
Sbjct: 183 QGMLLDEVCYGTLINGLCKIGRSIDAFQLLQEMEGQVVKPNIVIYNMIIDSFCKDELTCK 242

Query: 589 AWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
           A + Y  ++  G+ P++ T  SL+  F R GQ  +   L+  M+N  + P++ T+ +L+
Sbjct: 243 ARDLYLKIVDMGIDPDILTYTSLIRGFCRTGQWGEVKQLMCEMVNKNINPNVYTFNVLI 301


>gi|356561679|ref|XP_003549107.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g12775, mitochondrial-like [Glycine max]
          Length = 750

 Score =  148 bits (374), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 90/306 (29%), Positives = 165/306 (53%), Gaps = 1/306 (0%)

Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLI 402
           AL F + +  Q GF+ ++ +Y T++  L +  +  A+ +LL ++     +P+VV YN +I
Sbjct: 152 ALYFHDQVVAQ-GFQLNQVSYRTLINGLCKTGETKAVARLLRKLEGHSVKPDVVMYNTII 210

Query: 403 HSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLS 462
           HS  +   L +A D++ +M V G  P+ VTY  L+      G L  A  +  +M+   ++
Sbjct: 211 HSLCKNKLLGDACDLYSEMIVKGISPNVVTYNALVYGFCIMGHLKEAFSLLNEMKLKNIN 270

Query: 463 PDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKL 522
           PD  T++ +I+ LGK G ++AA  +   M+     P++VTYN +I         ++A  +
Sbjct: 271 PDVCTFNTLIDALGKEGKMKAAKIVLAVMMKACIKPDVVTYNSLIDGYFFLNKVKNAKYV 330

Query: 523 YRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGK 582
           +  M  +G  P+  TY+ +++ L     +DEA ++F EM+ KN +PD   Y  L+D   K
Sbjct: 331 FYSMAQSGVTPNVRTYTTMIDGLCKEKMVDEAMSLFEEMKYKNMIPDIVTYTSLIDGLCK 390

Query: 583 AGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQT 642
             ++ +A    + M + G++P+V +   LL A  + G+L +A    Q +L  G   ++QT
Sbjct: 391 NHHLERAIALCKKMKEQGIQPDVYSYTILLDALCKGGRLENAKEFFQRLLVKGYHLNVQT 450

Query: 643 YTLLLS 648
           Y ++++
Sbjct: 451 YNVMIN 456



 Score =  136 bits (343), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 132/517 (25%), Positives = 219/517 (42%), Gaps = 40/517 (7%)

Query: 349 WLRRQAG--FKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYG 406
            LR+  G   K D   Y T++  L + +  G    L  +M+  G  PNVVTYN L++ + 
Sbjct: 190 LLRKLEGHSVKPDVVMYNTIIHSLCKNKLLGDACDLYSEMIVKGISPNVVTYNALVYGFC 249

Query: 407 RANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTF 466
              +L EA  +  +M++    PD  T+ TLID   K G +  A  +   M  A + PD  
Sbjct: 250 IMGHLKEAFSLLNEMKLKNINPDVCTFNTLIDALGKEGKMKAAKIVLAVMMKACIKPDVV 309

Query: 467 TYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDM 526
           TY+ +I+       ++ A  +F  M   G  PN+ TY  MI    K +    A+ L+ +M
Sbjct: 310 TYNSLIDGYFFLNKVKNAKYVFYSMAQSGVTPNVRTYTTMIDGLCKEKMVDEAMSLFEEM 369

Query: 527 QNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNV 586
           +     PD VTY+ +++ L    +L+ A A+  +M+ +   PD   Y +L+D   K G +
Sbjct: 370 KYKNMIPDIVTYTSLIDGLCKNHHLERAIALCKKMKEQGIQPDVYSYTILLDALCKGGRL 429

Query: 587 RKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLL 646
             A E+++ +L  G   NV T N +++   +     +A  L   M   G  P   T+  +
Sbjct: 430 ENAKEFFQRLLVKGYHLNVQTYNVMINGLCKADLFGEAMDLKSKMEGKGCMPDAITFKTI 489

Query: 647 LSCCTEARSPYDMG--FCHELMA--------VSGHPAHMFLLSMPSP--GPDGQNVRDHV 694
           + C    +   D       E++A        V    A + L  M      PD       +
Sbjct: 490 I-CALFEKDENDKAEKILREMIARGLQEARKVRLKEAKIVLAVMTKACIKPDVVTYGTLM 548

Query: 695 -GSFL--EMMHSE---DRESKRGLVDAV------VDFLHKSGLKEEAGSVWEVAAQKNVY 742
            G FL  E+ H++      ++ G+   V      +D L K    +EA S++E    KN++
Sbjct: 549 DGYFLVNELKHAKYVFYSMAQMGVTPNVQCYTIMIDGLCKKKTVDEAMSLFEEMKHKNMF 608

Query: 743 PDAVKEKGMSYWLINLHVMSDGTAVIALSRTLAWFRKQMLISGVGP---SRIDIVTGWGR 799
           P+ V    +   L   H          L R +A   K+M   G+ P   S   ++ G  +
Sbjct: 609 PNIVTYTSLIDALCKNH---------HLERAIALL-KEMKEHGIQPDVYSYTILLDGLCK 658

Query: 800 RSRVTGTSLVRQAVQELLHMFSFPFFTENGNSGCFVG 836
             R+ G   + Q +    +  +   +T   N  C  G
Sbjct: 659 SGRLEGAKEIFQRLLVKGYHLNVQVYTAMINELCKAG 695



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 79/319 (24%), Positives = 146/319 (45%), Gaps = 23/319 (7%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           ++ G + D ++YT ++  L +  +     +   +++  G   NV TYN +I+   +A+  
Sbjct: 405 KEQGIQPDVYSYTILLDALCKGGRLENAKEFFQRLLVKGYHLNVQTYNVMINGLCKADLF 464

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGL---------- 461
            EA+D+  +M+  GC PD +T+ T+I    +    D A  + ++M A GL          
Sbjct: 465 GEAMDLKSKMEGKGCMPDAITFKTIICALFEKDENDKAEKILREMIARGLQEARKVRLKE 524

Query: 462 -------------SPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIA 508
                         PD  TY  +++       L+ A  +F  M   G  PN+  Y IMI 
Sbjct: 525 AKIVLAVMTKACIKPDVVTYGTLMDGYFLVNELKHAKYVFYSMAQMGVTPNVQCYTIMID 584

Query: 509 LQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVP 568
              K +    A+ L+ +M++    P+ VTY+ +++ L    +L+ A A+  EM+     P
Sbjct: 585 GLCKKKTVDEAMSLFEEMKHKNMFPNIVTYTSLIDALCKNHHLERAIALLKEMKEHGIQP 644

Query: 569 DEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLL 628
           D   Y +L+D   K+G +  A E ++ +L  G   NV    ++++   + G   +A  L 
Sbjct: 645 DVYSYTILLDGLCKSGRLEGAKEIFQRLLVKGYHLNVQVYTAMINELCKAGLFDEALDLQ 704

Query: 629 QGMLNLGLKPSLQTYTLLL 647
             M + G  P   T+ +++
Sbjct: 705 XKMEDKGCMPDAVTFDIII 723



 Score =  119 bits (299), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 79/295 (26%), Positives = 142/295 (48%), Gaps = 5/295 (1%)

Query: 374 RQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTY 433
           + +  +  L  +   +G  P++ T N L++ +    ++  A  V   +   G  P+ +T 
Sbjct: 77  KHYPTVISLFKKFESNGATPDLCTLNILMNCFCHLTHITFAFSVLANILKRGYHPNAITL 136

Query: 434 CTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVN 493
            TLI      G +  A+  + ++ A G   +  +Y  +IN L K G  +A  +L  ++  
Sbjct: 137 NTLIKGLCFRGEIKKALYFHDQVVAQGFQLNQVSYRTLINGLCKTGETKAVARLLRKLEG 196

Query: 494 QGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHC--GYL 551
               P++V YN +I    K +    A  LY +M   G  P+ VTY+ +  V G C  G+L
Sbjct: 197 HSVKPDVVMYNTIIHSLCKNKLLGDACDLYSEMIVKGISPNVVTYNAL--VYGFCIMGHL 254

Query: 552 DEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSL 611
            EA ++  EM+ KN  PD   +  L+D  GK G ++ A      M++A ++P+V T NSL
Sbjct: 255 KEAFSLLNEMKLKNINPDVCTFNTLIDALGKEGKMKAAKIVLAVMMKACIKPDVVTYNSL 314

Query: 612 LSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS-CCTEARSPYDMGFCHEL 665
           +  +  + ++ +A ++   M   G+ P+++TYT ++   C E      M    E+
Sbjct: 315 IDGYFFLNKVKNAKYVFYSMAQSGVTPNVRTYTTMIDGLCKEKMVDEAMSLFEEM 369



 Score =  117 bits (293), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 92/374 (24%), Positives = 166/374 (44%), Gaps = 8/374 (2%)

Query: 382 LLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHA 441
           +L  +++ G  PN +T N LI        + +AL    Q+   G + ++V+Y TLI+   
Sbjct: 120 VLANILKRGYHPNAITLNTLIKGLCFRGEIKKALYFHDQVVAQGFQLNQVSYRTLINGLC 179

Query: 442 KAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLV 501
           K G       + +K++   + PD   Y+ II+ L K   L  A  L+ EM+ +G  PN+V
Sbjct: 180 KTGETKAVARLLRKLEGHSVKPDVVMYNTIIHSLCKNKLLGDACDLYSEMIVKGISPNVV 239

Query: 502 TYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEM 561
           TYN ++       + + A  L  +M+     PD  T++ +++ LG  G +  A+ V A M
Sbjct: 240 TYNALVYGFCIMGHLKEAFSLLNEMKLKNINPDVCTFNTLIDALGKEGKMKAAKIVLAVM 299

Query: 562 RRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQL 621
            +    PD   Y  L+D +     V+ A   + +M Q+G+ PNV T  +++    +   +
Sbjct: 300 MKACIKPDVVTYNSLIDGYFFLNKVKNAKYVFYSMAQSGVTPNVRTYTTMIDGLCKEKMV 359

Query: 622 SDAYHLLQGMLNLGLKPSLQTYTLLLS-CCTEARSPYDMGFCHELMAVSGHP---AHMFL 677
            +A  L + M    + P + TYT L+   C        +  C ++      P   ++  L
Sbjct: 360 DEAMSLFEEMKYKNMIPDIVTYTSLIDGLCKNHHLERAIALCKKMKEQGIQPDVYSYTIL 419

Query: 678 LSMPSPGPDGQNVRDHVGSFLEMMHSEDRESKRGLVDAVVDFLHKSGLKEEAGSVWEVAA 737
           L     G   +N ++    F + +  +         + +++ L K+ L  EA  +     
Sbjct: 420 LDALCKGGRLENAKE----FFQRLLVKGYHLNVQTYNVMINGLCKADLFGEAMDLKSKME 475

Query: 738 QKNVYPDAVKEKGM 751
            K   PDA+  K +
Sbjct: 476 GKGCMPDAITFKTI 489



 Score =  111 bits (278), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 83/314 (26%), Positives = 141/314 (44%), Gaps = 24/314 (7%)

Query: 346 FFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSY 405
           FF  L  + G+  +  TY  M+  L +A  FG    L  +M   GC P+ +T+  +I + 
Sbjct: 435 FFQRLLVK-GYHLNVQTYNVMINGLCKADLFGEAMDLKSKMEGKGCMPDAITFKTIICAL 493

Query: 406 -----------------------GRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAK 442
                                   R   L EA  V   M     +PD VTY TL+D +  
Sbjct: 494 FEKDENDKAEKILREMIARGLQEARKVRLKEAKIVLAVMTKACIKPDVVTYGTLMDGYFL 553

Query: 443 AGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVT 502
              L  A  ++  M   G++P+   Y+++I+ L K   +  A  LF EM ++   PN+VT
Sbjct: 554 VNELKHAKYVFYSMAQMGVTPNVQCYTIMIDGLCKKKTVDEAMSLFEEMKHKNMFPNIVT 613

Query: 503 YNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMR 562
           Y  +I    K  + + A+ L ++M+  G +PD  +Y+I+++ L   G L+ A+ +F  + 
Sbjct: 614 YTSLIDALCKNHHLERAIALLKEMKEHGIQPDVYSYTILLDGLCKSGRLEGAKEIFQRLL 673

Query: 563 RKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLS 622
            K +  +  VY  +++   KAG   +A +    M   G  P+  T + ++ A     +  
Sbjct: 674 VKGYHLNVQVYTAMINELCKAGLFDEALDLQXKMEDKGCMPDAVTFDIIIWALFEKDEND 733

Query: 623 DAYHLLQGMLNLGL 636
            A  +L  M+  GL
Sbjct: 734 KAEKILXEMIARGL 747



 Score = 84.7 bits (208), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 78/363 (21%), Positives = 153/363 (42%)

Query: 383 LDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAK 442
            D+M+     P    +N ++ S     +    + +FK+ +  G  PD  T   L++    
Sbjct: 51  FDRMLLMRPPPPTFHFNYILSSLVNNKHYPTVISLFKKFESNGATPDLCTLNILMNCFCH 110

Query: 443 AGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVT 502
              +  A  +   +   G  P+  T + +I  L   G ++ A     ++V QG   N V+
Sbjct: 111 LTHITFAFSVLANILKRGYHPNAITLNTLIKGLCFRGEIKKALYFHDQVVAQGFQLNQVS 170

Query: 503 YNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMR 562
           Y  +I    K    ++  +L R ++    +PD V Y+ ++  L     L +A  +++EM 
Sbjct: 171 YRTLINGLCKTGETKAVARLLRKLEGHSVKPDVVMYNTIIHSLCKNKLLGDACDLYSEMI 230

Query: 563 RKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLS 622
            K   P+   Y  LV  +   G++++A+     M    + P+V T N+L+ A  + G++ 
Sbjct: 231 VKGISPNVVTYNALVYGFCIMGHLKEAFSLLNEMKLKNINPDVCTFNTLIDALGKEGKMK 290

Query: 623 DAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGFCHELMAVSGHPAHMFLLSMPS 682
            A  +L  M+   +KP + TY  L+          +  +    MA SG   ++   +   
Sbjct: 291 AAKIVLAVMMKACIKPDVVTYNSLIDGYFFLNKVKNAKYVFYSMAQSGVTPNVRTYTTMI 350

Query: 683 PGPDGQNVRDHVGSFLEMMHSEDRESKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVY 742
            G   + + D   S  E M  ++         +++D L K+   E A ++ +   ++ + 
Sbjct: 351 DGLCKEKMVDEAMSLFEEMKYKNMIPDIVTYTSLIDGLCKNHHLERAIALCKKMKEQGIQ 410

Query: 743 PDA 745
           PD 
Sbjct: 411 PDV 413



 Score = 60.1 bits (144), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 71/320 (22%), Positives = 127/320 (39%), Gaps = 37/320 (11%)

Query: 463 PDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKL 522
           P TF ++ I++ L    H      LF +  + G  P+L T NI++       +   A  +
Sbjct: 61  PPTFHFNYILSSLVNNKHYPTVISLFKKFESNGATPDLCTLNILMNCFCHLTHITFAFSV 120

Query: 523 YRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEA----EAVFAEMRRKNWV----------- 567
             ++   G+ P+ +T + +++ L   G + +A    + V A+  + N V           
Sbjct: 121 LANILKRGYHPNAITLNTLIKGLCFRGEIKKALYFHDQVVAQGFQLNQVSYRTLINGLCK 180

Query: 568 --------------------PDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPT 607
                               PD  +Y  ++    K   +  A + Y  M+  G+ PNV T
Sbjct: 181 TGETKAVARLLRKLEGHSVKPDVVMYNTIIHSLCKNKLLGDACDLYSEMIVKGISPNVVT 240

Query: 608 CNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTY-TLLLSCCTEARSPYDMGFCHELM 666
            N+L+  F  +G L +A+ LL  M    + P + T+ TL+ +   E +          +M
Sbjct: 241 YNALVYGFCIMGHLKEAFSLLNEMKLKNINPDVCTFNTLIDALGKEGKMKAAKIVLAVMM 300

Query: 667 AVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRESKRGLVDAVVDFLHKSGLK 726
                P  +   S+         V++    F  M  S    + R     ++D L K  + 
Sbjct: 301 KACIKPDVVTYNSLIDGYFFLNKVKNAKYVFYSMAQSGVTPNVRTYT-TMIDGLCKEKMV 359

Query: 727 EEAGSVWEVAAQKNVYPDAV 746
           +EA S++E    KN+ PD V
Sbjct: 360 DEAMSLFEEMKYKNMIPDIV 379


>gi|255660796|gb|ACU25567.1| pentatricopeptide repeat-containing protein [Verbena litoralis]
          Length = 418

 Score =  148 bits (374), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 84/279 (30%), Positives = 151/279 (54%)

Query: 370 LGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPD 429
           L + + F  +    ++ +  G   ++  +N L+HS+ +   +  A  VF  +      P 
Sbjct: 111 LMKLKYFKLVWGFYEESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPS 170

Query: 430 RVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFC 489
            V++ TL++ + K G LD    +   MQ +G+ PD +TYSV+IN L K   +  A+ LF 
Sbjct: 171 VVSFNTLMNGYIKLGDLDEGFRLKNAMQVSGVQPDVYTYSVLINGLCKESKMDDANXLFD 230

Query: 490 EMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCG 549
           EM+++G +PN VT+  +I    K      A+++Y+ M +    PD +TY+ ++  L   G
Sbjct: 231 EMLDKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKG 290

Query: 550 YLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCN 609
            L +A+ +  EM  K   PD+  Y  L+D   K G++  A+E+ + M++  +R +     
Sbjct: 291 DLKQAQDLIDEMIMKGLXPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYT 350

Query: 610 SLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
           +L+S   + G+  DA  +L+ MLN+GLKP + TYT++++
Sbjct: 351 ALISGLCQEGRSVDAEKMLREMLNVGLKPEIGTYTMIIN 389



 Score =  122 bits (306), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 72/227 (31%), Positives = 121/227 (53%)

Query: 381 KLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIH 440
           +L + M   G QP+V TY+ LI+   + + +++A  +F +M   G  P+ VT+ TLID H
Sbjct: 192 RLKNAMQVSGVQPDVYTYSVLINGLCKESKMDDANXLFDEMLDKGLVPNGVTFTTLIDGH 251

Query: 441 AKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNL 500
            K G +D+AM++YK+M +  LSPD  TY+ +I  L K G L+ A  L  EM+ +G  P+ 
Sbjct: 252 CKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLXPDK 311

Query: 501 VTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAE 560
           +TY  +I    K  + ++A +  + M       D V Y+ ++  L   G   +AE +  E
Sbjct: 312 ITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLRE 371

Query: 561 MRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPT 607
           M      P+   Y ++++ + K G+V    +  + M + G  P+V T
Sbjct: 372 MLNVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYMPSVVT 418



 Score = 53.1 bits (126), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 33/139 (23%), Positives = 69/139 (49%), Gaps = 1/139 (0%)

Query: 517 QSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLL 576
           + A++ YR  +   F     T   V+E L    Y       + E     +      + +L
Sbjct: 83  RDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFYEESLECGYPASLYFFNIL 142

Query: 577 VDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGL 636
           +  + K G +R A   ++A+ +  LRP+V + N+L++ ++++G L + + L   M   G+
Sbjct: 143 MHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQVSGV 202

Query: 637 KPSLQTYTLLLS-CCTEAR 654
           +P + TY++L++  C E++
Sbjct: 203 QPDVYTYSVLINGLCKESK 221


>gi|168030898|ref|XP_001767959.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162680801|gb|EDQ67234.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 957

 Score =  148 bits (374), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 95/338 (28%), Positives = 156/338 (46%), Gaps = 35/338 (10%)

Query: 333 VLKQLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQ 392
           VLK+ +    A  FF W++ Q  +      YTT++GI G+A +     + L +M+  G +
Sbjct: 80  VLKEQRGWRQAREFFEWMKLQIPYSPSVIAYTTLLGIYGQAGKLTLAEETLSEMLDAGVE 139

Query: 393 PNVVTYNRLIHSYGRANYLNEALDVFKQMQVVG--------------------------- 425
           P+ V    ++ +Y R    +  L+ ++ M+  G                           
Sbjct: 140 PDEVAGGCMLEAYARWERYDTLLEFYEAMRQRGLVPSAHVYRTMIVTLYKAERHSDALML 199

Query: 426 --------CEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGK 477
                    EP+ V Y  +I I  K G  + A+  +K M+AAG  PD   Y+ II  LGK
Sbjct: 200 WEDLLVEKLEPNFVLYAIIIHILNKEGRTEDAVHTFKDMRAAGHLPDELLYNTIICALGK 259

Query: 478 AGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVT 537
            G  Q +  L+ +M  QG +P+  TY IMI + +KA  + SA +   +MQ +G   D+V 
Sbjct: 260 LGRYQESEALYLDMKKQGIVPSKFTYTIMINVWSKAGRFASAAETLAEMQRSGCIADEVV 319

Query: 538 YSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAML 597
           Y  ++ + G  G  +EAE +F EM     +  E  Y  +  +  +AG   +A + ++ M 
Sbjct: 320 YCSIINMYGKAGLYEEAEKIFKEMDTLGLLSHEKSYTSMAKVRAEAGRHAEALKLFDVMA 379

Query: 598 QAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLG 635
           + GL     T N+LL  F+R+G +  A  +   M+  G
Sbjct: 380 EKGLLTTRMTWNTLLHCFVRIGDVEQATKVYNDMVEAG 417



 Score =  136 bits (343), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 112/447 (25%), Positives = 199/447 (44%), Gaps = 25/447 (5%)

Query: 207 RRFKRVSNASNGTSLETHNVSSDNSDRRRIVQPRSKAHSNRLNSNFKSNLQPSDAKVVEC 266
           RR+ R   A+     +T ++  ++ D R+  +P       R+   F  +L   D  +V  
Sbjct: 28  RRYTRPVEAAIAAVRQTSSLPPEDVDMRQAQRP-----DLRVMKPFVKDLGFRDMCIV-L 81

Query: 267 VSERFSKPSRE----MKIPAGLAPFSRHFASTGNVVESVSRILRQWKWGPLAEEALG--- 319
             +R  + +RE    MK+    +P    + +   +     ++        LAEE L    
Sbjct: 82  KEQRGWRQAREFFEWMKLQIPYSPSVIAYTTLLGIYGQAGKL-------TLAEETLSEML 134

Query: 320 NTNYSMDAYQANQVLK---QLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQF 376
           +     D      +L+   + + +   L F+  +R Q G     H Y TM+  L +A + 
Sbjct: 135 DAGVEPDEVAGGCMLEAYARWERYDTLLEFYEAMR-QRGLVPSAHVYRTMIVTLYKAERH 193

Query: 377 GAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTL 436
                L + ++ +  +PN V Y  +IH   +     +A+  FK M+  G  PD + Y T+
Sbjct: 194 SDALMLWEDLLVEKLEPNFVLYAIIIHILNKEGRTEDAVHTFKDMRAAGHLPDELLYNTI 253

Query: 437 IDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGC 496
           I    K G    +  +Y  M+  G+ P  FTY+++IN   KAG   +A +   EM   GC
Sbjct: 254 ICALGKLGRYQESEALYLDMKKQGIVPSKFTYTIMINVWSKAGRFASAAETLAEMQRSGC 313

Query: 497 IPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEA 556
           I + V Y  +I +  KA  Y+ A K++++M   G    + +Y+ + +V    G   EA  
Sbjct: 314 IADEVVYCSIINMYGKAGLYEEAEKIFKEMDTLGLLSHEKSYTSMAKVRAEAGRHAEALK 373

Query: 557 VFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFL 616
           +F  M  K  +     +  L+  + + G+V +A + Y  M++AG   NV T  ++++ + 
Sbjct: 374 LFDVMAEKGLLTTRMTWNTLLHCFVRIGDVEQATKVYNDMVEAG-SANVVTYGNMINLYS 432

Query: 617 RVGQLSDAYHLLQGMLNLGLKPSLQTY 643
           +   + DA +LL  M   G+KP    Y
Sbjct: 433 KFQMVEDAENLLAEMRESGVKPDEYIY 459



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 80/288 (27%), Positives = 143/288 (49%), Gaps = 2/288 (0%)

Query: 361 HTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQ 420
           + Y TM+ +    ++      + D+M  +G   + VT + L+H+Y +     +A  + K+
Sbjct: 580 YVYNTMIKLCAVCKELEEAIFVFDRMEENGRMFDAVTVSILVHAYTKEGRFKDAAGLMKR 639

Query: 421 MQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGH 480
            + VG   D V Y T +  + K+G L  A+++Y +MQ A + P   TY+++I+   K G 
Sbjct: 640 AKKVGVAMDTVAYNTSLKANLKSGNLKGALEVYGEMQEADIEPSAKTYTILISLFSKLGD 699

Query: 481 LQAAHQLFCEMVNQGCI-PNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYS 539
           L  A Q F E++N   +  + + Y+ MI     A   + A  L+++M+  GF+P++V Y+
Sbjct: 700 LGRAVQAF-EVLNSSEVGADEIAYSQMIHCYGCAGRPKEAADLFQEMETKGFKPNEVIYN 758

Query: 540 IVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQA 599
            +++     G   EA  + ++MRRK   P    Y LL+  +G  G    A      M   
Sbjct: 759 NLLDAFARAGLFAEARLLLSDMRRKGCPPSSVTYLLLMSAYGSKGKPADAESLLHLMQDR 818

Query: 600 GLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
           GL P+    N ++ A+  VG+LSDA  +   +  +G+   L  +  L+
Sbjct: 819 GLYPDCRHYNEVIRAYGNVGKLSDACRIFYELKTVGIGLELGCFRTLV 866



 Score =  127 bits (318), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 73/261 (27%), Positives = 133/261 (50%)

Query: 393 PNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDM 452
           P+V+ Y  L+  YG+A  L  A +   +M   G EPD V    +++ +A+    D  ++ 
Sbjct: 105 PSVIAYTTLLGIYGQAGKLTLAEETLSEMLDAGVEPDEVAGGCMLEAYARWERYDTLLEF 164

Query: 453 YKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAK 512
           Y+ M+  GL P    Y  +I  L KA     A  L+ +++ +   PN V Y I+I +  K
Sbjct: 165 YEAMRQRGLVPSAHVYRTMIVTLYKAERHSDALMLWEDLLVEKLEPNFVLYAIIIHILNK 224

Query: 513 ARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPV 572
               + A+  ++DM+ AG  PD++ Y+ ++  LG  G   E+EA++ +M+++  VP +  
Sbjct: 225 EGRTEDAVHTFKDMRAAGHLPDELLYNTIICALGKLGRYQESEALYLDMKKQGIVPSKFT 284

Query: 573 YGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGML 632
           Y +++++W KAG    A E    M ++G   +     S+++ + + G   +A  + + M 
Sbjct: 285 YTIMINVWSKAGRFASAAETLAEMQRSGCIADEVVYCSIINMYGKAGLYEEAEKIFKEMD 344

Query: 633 NLGLKPSLQTYTLLLSCCTEA 653
            LGL    ++YT +     EA
Sbjct: 345 TLGLLSHEKSYTSMAKVRAEA 365



 Score =  119 bits (297), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 85/290 (29%), Positives = 131/290 (45%), Gaps = 2/290 (0%)

Query: 382 LLDQMVR-DGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIH 440
           LLD++V   GC  +      +I+ YGR     +A  +F  +Q     P    Y T+I + 
Sbjct: 531 LLDKLVEAGGCIVDTAAV-LMINLYGRRGLFQKAKSLFNSLQKKDHPPSLYVYNTMIKLC 589

Query: 441 AKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNL 500
           A    L+ A+ ++ +M+  G   D  T S++++   K G  + A  L       G   + 
Sbjct: 590 AVCKELEEAIFVFDRMEENGRMFDAVTVSILVHAYTKEGRFKDAAGLMKRAKKVGVAMDT 649

Query: 501 VTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAE 560
           V YN  +    K+ N + AL++Y +MQ A  EP   TY+I++ +    G L  A   F  
Sbjct: 650 VAYNTSLKANLKSGNLKGALEVYGEMQEADIEPSAKTYTILISLFSKLGDLGRAVQAFEV 709

Query: 561 MRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQ 620
           +       DE  Y  ++  +G AG  ++A + ++ M   G +PN    N+LL AF R G 
Sbjct: 710 LNSSEVGADEIAYSQMIHCYGCAGRPKEAADLFQEMETKGFKPNEVIYNNLLDAFARAGL 769

Query: 621 LSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGFCHELMAVSG 670
            ++A  LL  M   G  PS  TY LL+S       P D      LM   G
Sbjct: 770 FAEARLLLSDMRRKGCPPSSVTYLLLMSAYGSKGKPADAESLLHLMQDRG 819



 Score =  113 bits (282), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 78/278 (28%), Positives = 135/278 (48%)

Query: 366 MVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVG 425
           M+ + GR   F     L + + +    P++  YN +I        L EA+ VF +M+  G
Sbjct: 550 MINLYGRRGLFQKAKSLFNSLQKKDHPPSLYVYNTMIKLCAVCKELEEAIFVFDRMEENG 609

Query: 426 CEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAH 485
              D VT   L+  + K G    A  + K+ +  G++ DT  Y+  +    K+G+L+ A 
Sbjct: 610 RMFDAVTVSILVHAYTKEGRFKDAAGLMKRAKKVGVAMDTVAYNTSLKANLKSGNLKGAL 669

Query: 486 QLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVL 545
           +++ EM      P+  TY I+I+L +K  +   A++ +  + ++    D++ YS ++   
Sbjct: 670 EVYGEMQEADIEPSAKTYTILISLFSKLGDLGRAVQAFEVLNSSEVGADEIAYSQMIHCY 729

Query: 546 GHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNV 605
           G  G   EA  +F EM  K + P+E +Y  L+D + +AG   +A      M + G  P+ 
Sbjct: 730 GCAGRPKEAADLFQEMETKGFKPNEVIYNNLLDAFARAGLFAEARLLLSDMRRKGCPPSS 789

Query: 606 PTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTY 643
            T   L+SA+   G+ +DA  LL  M + GL P  + Y
Sbjct: 790 VTYLLLMSAYGSKGKPADAESLLHLMQDRGLYPDCRHY 827



 Score =  106 bits (265), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 78/299 (26%), Positives = 139/299 (46%), Gaps = 4/299 (1%)

Query: 333 VLKQLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQ 392
           V K+L++   A+  F+ +  + G   D  T + +V    +  +F     L+ +  + G  
Sbjct: 591 VCKELEE---AIFVFDRME-ENGRMFDAVTVSILVHAYTKEGRFKDAAGLMKRAKKVGVA 646

Query: 393 PNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDM 452
            + V YN  + +  ++  L  AL+V+ +MQ    EP   TY  LI + +K G L  A+  
Sbjct: 647 MDTVAYNTSLKANLKSGNLKGALEVYGEMQEADIEPSAKTYTILISLFSKLGDLGRAVQA 706

Query: 453 YKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAK 512
           ++ + ++ +  D   YS +I+C G AG  + A  LF EM  +G  PN V YN ++   A+
Sbjct: 707 FEVLNSSEVGADEIAYSQMIHCYGCAGRPKEAADLFQEMETKGFKPNEVIYNNLLDAFAR 766

Query: 513 ARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPV 572
           A  +  A  L  DM+  G  P  VTY ++M   G  G   +AE++   M+ +   PD   
Sbjct: 767 AGLFAEARLLLSDMRRKGCPPSSVTYLLLMSAYGSKGKPADAESLLHLMQDRGLYPDCRH 826

Query: 573 YGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGM 631
           Y  ++  +G  G +  A   +  +   G+   +    +L+   L  GQ    + + + +
Sbjct: 827 YNEVIRAYGNVGKLSDACRIFYELKTVGIGLELGCFRTLVKIHLDHGQFEQGWQIYKDL 885



 Score = 95.5 bits (236), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 81/328 (24%), Positives = 144/328 (43%), Gaps = 22/328 (6%)

Query: 340 HTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYN 399
           H  AL  F+ +  + G      T+ T++    R        K+ + MV  G   NVVTY 
Sbjct: 368 HAEALKLFD-VMAEKGLLTTRMTWNTLLHCFVRIGDVEQATKVYNDMVEAG-SANVVTYG 425

Query: 400 RLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAA 459
            +I+ Y +   + +A ++  +M+  G +PD   Y + + ++  +  +D A  + ++M+  
Sbjct: 426 NMINLYSKFQMVEDAENLLAEMRESGVKPDEYIYGSFVKLYCNSDMIDKATMVVQEMKDD 485

Query: 460 GL-----------------SP-DTFTYSVIINCLGKAGHLQAAHQLFCEMVNQ-GCIPNL 500
           GL                 SP DT   + ++    +AG L+ A  L  ++V   GCI + 
Sbjct: 486 GLESVCNEREMFPLGQALQSPIDTQILNQLLIKRAEAGELREAELLLDKLVEAGGCIVDT 545

Query: 501 VTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAE 560
               +MI L  +   +Q A  L+  +Q     P    Y+ ++++   C  L+EA  VF  
Sbjct: 546 AAV-LMINLYGRRGLFQKAKSLFNSLQKKDHPPSLYVYNTMIKLCAVCKELEEAIFVFDR 604

Query: 561 MRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQ 620
           M     + D     +LV  + K G  + A    +   + G+  +    N+ L A L+ G 
Sbjct: 605 MEENGRMFDAVTVSILVHAYTKEGRFKDAAGLMKRAKKVGVAMDTVAYNTSLKANLKSGN 664

Query: 621 LSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
           L  A  +   M    ++PS +TYT+L+S
Sbjct: 665 LKGALEVYGEMQEADIEPSAKTYTILIS 692



 Score = 84.7 bits (208), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 56/248 (22%), Positives = 108/248 (43%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           ++ G   D   Y T +    ++       ++  +M     +P+  TY  LI  + +   L
Sbjct: 641 KKVGVAMDTVAYNTSLKANLKSGNLKGALEVYGEMQEADIEPSAKTYTILISLFSKLGDL 700

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
             A+  F+ +       D + Y  +I  +  AG    A D++++M+  G  P+   Y+ +
Sbjct: 701 GRAVQAFEVLNSSEVGADEIAYSQMIHCYGCAGRPKEAADLFQEMETKGFKPNEVIYNNL 760

Query: 472 INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF 531
           ++   +AG    A  L  +M  +GC P+ VTY ++++          A  L   MQ+ G 
Sbjct: 761 LDAFARAGLFAEARLLLSDMRRKGCPPSSVTYLLLMSAYGSKGKPADAESLLHLMQDRGL 820

Query: 532 EPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWE 591
            PD   Y+ V+   G+ G L +A  +F E++      +   +  LV +    G   + W+
Sbjct: 821 YPDCRHYNEVIRAYGNVGKLSDACRIFYELKTVGIGLELGCFRTLVKIHLDHGQFEQGWQ 880

Query: 592 WYEAMLQA 599
            Y+ + Q+
Sbjct: 881 IYKDLSQS 888



 Score = 76.3 bits (186), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 45/192 (23%), Positives = 90/192 (46%)

Query: 462 SPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALK 521
           SP    Y+ ++   G+AG L  A +   EM++ G  P+ V    M+   A+   Y + L+
Sbjct: 104 SPSVIAYTTLLGIYGQAGKLTLAEETLSEMLDAGVEPDEVAGGCMLEAYARWERYDTLLE 163

Query: 522 LYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWG 581
            Y  M+  G  P    Y  ++  L       +A  ++ ++  +   P+  +Y +++ +  
Sbjct: 164 FYEAMRQRGLVPSAHVYRTMIVTLYKAERHSDALMLWEDLLVEKLEPNFVLYAIIIHILN 223

Query: 582 KAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQ 641
           K G    A   ++ M  AG  P+    N+++ A  ++G+  ++  L   M   G+ PS  
Sbjct: 224 KEGRTEDAVHTFKDMRAAGHLPDELLYNTIICALGKLGRYQESEALYLDMKKQGIVPSKF 283

Query: 642 TYTLLLSCCTEA 653
           TYT++++  ++A
Sbjct: 284 TYTIMINVWSKA 295



 Score = 58.5 bits (140), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 38/167 (22%), Positives = 74/167 (44%), Gaps = 1/167 (0%)

Query: 506 MIALQAKARNYQSALKLYRDMQ-NAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRK 564
           M  +  + R ++ A + +  M+    + P  + Y+ ++ + G  G L  AE   +EM   
Sbjct: 77  MCIVLKEQRGWRQAREFFEWMKLQIPYSPSVIAYTTLLGIYGQAGKLTLAEETLSEMLDA 136

Query: 565 NWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDA 624
              PDE   G +++ + +        E+YEAM Q GL P+     +++    +  + SDA
Sbjct: 137 GVEPDEVAGGCMLEAYARWERYDTLLEFYEAMRQRGLVPSAHVYRTMIVTLYKAERHSDA 196

Query: 625 YHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGFCHELMAVSGH 671
             L + +L   L+P+   Y +++    +     D     + M  +GH
Sbjct: 197 LMLWEDLLVEKLEPNFVLYAIIIHILNKEGRTEDAVHTFKDMRAAGH 243


>gi|15237384|ref|NP_197167.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75171647|sp|Q9FMD3.1|PP389_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g16640, mitochondrial; Flags: Precursor
 gi|10176973|dbj|BAB10191.1| unnamed protein product [Arabidopsis thaliana]
 gi|110737318|dbj|BAF00605.1| hypothetical protein [Arabidopsis thaliana]
 gi|332004938|gb|AED92321.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 504

 Score =  148 bits (374), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 91/317 (28%), Positives = 164/317 (51%), Gaps = 7/317 (2%)

Query: 334 LKQLQDHTVALGFFNWLRRQA-GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQ 392
           + +++ + V +  + W + Q  G  H+  T   ++    R  Q       L +M++ G +
Sbjct: 91  ISKMKKYDVVI--YLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHE 148

Query: 393 PNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDM 452
           P++VT+  L++ + R + + +AL +F QM  +G +P+ V Y T+ID   K+  +D A+D+
Sbjct: 149 PSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDL 208

Query: 453 YKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAK 512
             +M+  G+ PD  TY+ +I+ L  +G    A ++   M  +   P++ T+N +I    K
Sbjct: 209 LNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVK 268

Query: 513 ARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGY--LDEAEAVFAEMRRKNWVPDE 570
                 A + Y +M     +PD VTYS++  + G C Y  LDEAE +F  M  K   PD 
Sbjct: 269 EGRVSEAEEFYEEMIRRSLDPDIVTYSLL--IYGLCMYSRLDEAEEMFGFMVSKGCFPDV 326

Query: 571 PVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQG 630
             Y +L++ + K+  V    + +  M Q G+  N  T   L+  + R G+L+ A  + + 
Sbjct: 327 VTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRR 386

Query: 631 MLNLGLKPSLQTYTLLL 647
           M+  G+ P++ TY +LL
Sbjct: 387 MVFCGVHPNIITYNVLL 403



 Score =  140 bits (353), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 89/295 (30%), Positives = 153/295 (51%), Gaps = 4/295 (1%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           G+K +   Y T++  L +++Q      LL++M +DG  P+VVTYN LI     +   ++A
Sbjct: 181 GYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDA 240

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
             +   M      PD  T+  LID   K G +  A + Y++M    L PD  TYS++I  
Sbjct: 241 TRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYG 300

Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPD 534
           L     L  A ++F  MV++GC P++VTY+I+I    K++  +  +KL+ +M   G   +
Sbjct: 301 LCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRN 360

Query: 535 KVTYSIVMEVLGHC--GYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEW 592
            VTY+I+++  G+C  G L+ AE +F  M      P+   Y +L+      G + KA   
Sbjct: 361 TVTYTILIQ--GYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVI 418

Query: 593 YEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
              M + G+  ++ T N ++    + G+++DA+ +   +   GL P + TYT ++
Sbjct: 419 LADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMM 473



 Score =  133 bits (334), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 83/297 (27%), Positives = 151/297 (50%), Gaps = 1/297 (0%)

Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLI 402
           AL   N + +  G   D  TY +++  L  + ++    +++  M +    P+V T+N LI
Sbjct: 205 ALDLLNRMEKD-GIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALI 263

Query: 403 HSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLS 462
            +  +   ++EA + +++M     +PD VTY  LI        LD A +M+  M + G  
Sbjct: 264 DACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCF 323

Query: 463 PDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKL 522
           PD  TYS++IN   K+  ++   +LFCEM  +G + N VTY I+I    +A     A ++
Sbjct: 324 PDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEI 383

Query: 523 YRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGK 582
           +R M   G  P+ +TY++++  L   G +++A  + A+M++     D   Y +++    K
Sbjct: 384 FRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCK 443

Query: 583 AGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPS 639
           AG V  AW+ Y ++   GL P++ T  +++    + G   +A  L + M   G+ P+
Sbjct: 444 AGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKGLRREADALFRKMKEDGILPN 500



 Score =  112 bits (280), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 67/256 (26%), Positives = 128/256 (50%)

Query: 393 PNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDM 452
           P++  ++RL+ +  +    +  + +++QMQ++G   +  T   L++   +   L +A+  
Sbjct: 79  PSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSF 138

Query: 453 YKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAK 512
             KM   G  P   T+  ++N   +   +  A  +F +MV  G  PN+V YN +I    K
Sbjct: 139 LGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCK 198

Query: 513 ARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPV 572
           ++   +AL L   M+  G  PD VTY+ ++  L   G   +A  + + M ++   PD   
Sbjct: 199 SKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFT 258

Query: 573 YGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGML 632
           +  L+D   K G V +A E+YE M++  L P++ T + L+       +L +A  +   M+
Sbjct: 259 FNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMV 318

Query: 633 NLGLKPSLQTYTLLLS 648
           + G  P + TY++L++
Sbjct: 319 SKGCFPDVVTYSILIN 334



 Score =  110 bits (275), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 65/212 (30%), Positives = 112/212 (52%)

Query: 359 DEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVF 418
           D  TY+ ++  L    +     ++   MV  GC P+VVTY+ LI+ Y ++  +   + +F
Sbjct: 290 DIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLF 349

Query: 419 KQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKA 478
            +M   G   + VTY  LI  + +AG L+VA +++++M   G+ P+  TY+V+++ L   
Sbjct: 350 CEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDN 409

Query: 479 GHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTY 538
           G ++ A  +  +M   G   ++VTYNI+I    KA     A  +Y  +   G  PD  TY
Sbjct: 410 GKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTY 469

Query: 539 SIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDE 570
           + +M  L   G   EA+A+F +M+    +P+E
Sbjct: 470 TTMMLGLYKKGLRREADALFRKMKEDGILPNE 501



 Score = 92.0 bits (227), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 59/250 (23%), Positives = 118/250 (47%)

Query: 398 YNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQ 457
           Y  ++ +  R   L+++LD+F  M      P    +  L+   +K    DV + ++++MQ
Sbjct: 49  YREMLRNGIRFMKLDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQ 108

Query: 458 AAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQ 517
             G+  +  T ++++NC  +   L  A     +M+  G  P++VT+  ++    +     
Sbjct: 109 MLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVY 168

Query: 518 SALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLV 577
            AL ++  M   G++P+ V Y+ +++ L     +D A  +   M +    PD   Y  L+
Sbjct: 169 DALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLI 228

Query: 578 DLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLK 637
                +G    A      M +  + P+V T N+L+ A ++ G++S+A    + M+   L 
Sbjct: 229 SGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLD 288

Query: 638 PSLQTYTLLL 647
           P + TY+LL+
Sbjct: 289 PDIVTYSLLI 298



 Score = 57.0 bits (136), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 46/195 (23%), Positives = 80/195 (41%)

Query: 551 LDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNS 610
           LD++  +F  M +   +P    +  L+    K          +E M   G+  N+ TCN 
Sbjct: 62  LDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNI 121

Query: 611 LLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGFCHELMAVSG 670
           LL+ F R  QLS A   L  M+ LG +PS+ T+  LL+        YD  +  + M   G
Sbjct: 122 LLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMG 181

Query: 671 HPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRESKRGLVDAVVDFLHKSGLKEEAG 730
           +  ++ + +    G       D+    L  M  +         ++++  L  SG   +A 
Sbjct: 182 YKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDAT 241

Query: 731 SVWEVAAQKNVYPDA 745
            +     ++ +YPD 
Sbjct: 242 RMVSCMTKREIYPDV 256


>gi|145336953|ref|NP_176455.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|193806497|sp|Q3ECK2.2|PPR92_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g62680, mitochondrial; Flags: Precursor
 gi|332195872|gb|AEE33993.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 548

 Score =  148 bits (374), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 117/450 (26%), Positives = 207/450 (46%), Gaps = 61/450 (13%)

Query: 269 ERFSKPS-REMKIPAGLAPFS-----RHFASTGNVVESVSRILRQWKWGPLAE-----EA 317
           ER SK   R++K+   +  FS     R F S  +    +S I++  K+  +       E 
Sbjct: 54  ERLSKTRLRDIKLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEV 113

Query: 318 LGNTNYSMDAYQANQVLKQLQ---DHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRAR 374
           LG  N   D Y  N V+         ++AL     + +  G++ D  T  ++V    R  
Sbjct: 114 LGIRN---DLYTFNIVINCFCCCFQVSLALSILGKMLK-LGYEPDRVTIGSLVNGFCRRN 169

Query: 375 QFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYC 434
           +      L+D+MV  G +P++V YN +I S  +   +N+A D FK+++  G  P+ VTY 
Sbjct: 170 RVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYT 229

Query: 435 TLI-----------------------------------DIHAKAGFLDVAMDMYKKMQAA 459
            L+                                   D   K G +  A +++++M   
Sbjct: 230 ALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRM 289

Query: 460 GLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSA 519
            + PD  TYS +IN L     +  A+Q+F  MV++GC+ ++V+YN +I    KA+  +  
Sbjct: 290 SIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDG 349

Query: 520 LKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDL 579
           +KL+R+M   G   + VTY+ +++     G +D+A+  F++M      PD   Y +L+  
Sbjct: 350 MKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGG 409

Query: 580 WGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPS 639
               G + KA   +E M +  +  ++ T  +++    + G++ +A+ L   +   GLKP 
Sbjct: 410 LCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPD 469

Query: 640 LQTYTLLLS-CCTEARSPYDMGFCHELMAV 668
           + TYT ++S  CT+       G  HE+ A+
Sbjct: 470 IVTYTTMMSGLCTK-------GLLHEVEAL 492



 Score =  138 bits (348), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 85/294 (28%), Positives = 150/294 (51%), Gaps = 1/294 (0%)

Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLI 402
           A  FF  + R+ G + +  TYT +V  L  + ++    +LL  M++    PNV+TY+ L+
Sbjct: 209 AFDFFKEIERK-GIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALL 267

Query: 403 HSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLS 462
            ++ +   + EA ++F++M  +  +PD VTY +LI+       +D A  M+  M + G  
Sbjct: 268 DAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCL 327

Query: 463 PDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKL 522
            D  +Y+ +IN   KA  ++   +LF EM  +G + N VTYN +I    +A +   A + 
Sbjct: 328 ADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEF 387

Query: 523 YRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGK 582
           +  M   G  PD  TY+I++  L   G L++A  +F +M+++    D   Y  ++    K
Sbjct: 388 FSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCK 447

Query: 583 AGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGL 636
            G V +AW  + ++   GL+P++ T  +++S     G L +   L   M   GL
Sbjct: 448 TGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGL 501



 Score =  123 bits (309), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 80/279 (28%), Positives = 137/279 (49%), Gaps = 8/279 (2%)

Query: 362 TYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQM 421
           TY+ ++    +  +     +L ++MVR    P++VTY+ LI+     + ++EA  +F  M
Sbjct: 262 TYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLM 321

Query: 422 QVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHL 481
              GC  D V+Y TLI+   KA  ++  M ++++M   GL  +T TY+ +I    +AG +
Sbjct: 322 VSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDV 381

Query: 482 QAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIV 541
             A + F +M   G  P++ TYNI++         + AL ++ DMQ    + D VTY+ V
Sbjct: 382 DKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTV 441

Query: 542 MEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGL 601
           +  +   G ++EA ++F  +  K   PD   Y  ++      G + +    Y  M Q GL
Sbjct: 442 IRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGL 501

Query: 602 RPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSL 640
             N  T        L  G ++ +  L++ ML+ G  PSL
Sbjct: 502 MKNDCT--------LSDGDITLSAELIKKMLSCGYAPSL 532



 Score =  116 bits (290), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 115/476 (24%), Positives = 204/476 (42%), Gaps = 56/476 (11%)

Query: 363 YTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQ 422
           +  ++  + + +++  +  L  +M   G + ++ T+N +I+ +     ++ AL +  +M 
Sbjct: 88  FNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVSLALSILGKML 147

Query: 423 VVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQ 482
            +G EPDRVT  +L++   +   +  A+ +  KM   G  PD   Y+ II+ L K   + 
Sbjct: 148 KLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVN 207

Query: 483 AAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVM 542
            A   F E+  +G  PN+VTY  ++     +  +  A +L  DM      P+ +TYS ++
Sbjct: 208 DAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALL 267

Query: 543 EVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLR 602
           +     G + EA+ +F EM R +  PD   Y  L++       + +A + ++ M+  G  
Sbjct: 268 DAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCL 327

Query: 603 PNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGFC 662
            +V + N+L++ F +  ++ D   L + M   GL  +  TY  L+            GF 
Sbjct: 328 ADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQ-----------GF- 375

Query: 663 HELMAVSGHPAHMFLLSMPSPG--PDGQNVRDHVGSFLE-------MMHSEDRESKRGLV 713
               A     A  F   M   G  PD       +G   +       ++  ED + +   +
Sbjct: 376 --FQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDL 433

Query: 714 D-----AVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAVKEKGMSYWLIN---LH------ 759
           D      V+  + K+G  EEA S++   + K + PD V    M   L     LH      
Sbjct: 434 DIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALY 493

Query: 760 -------------VMSDGTAVIALSRTLAWFRKQMLISGVGPSRI-DIVTGWGRRS 801
                         +SDG   I LS  L    K+ML  G  PS + DI +G  +++
Sbjct: 494 TKMKQEGLMKNDCTLSDGD--ITLSAELI---KKMLSCGYAPSLLKDIKSGVCKKA 544



 Score =  105 bits (262), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 84/323 (26%), Positives = 148/323 (45%), Gaps = 12/323 (3%)

Query: 400 RLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAA 459
           RL  +  R   LN+A+D+F  M      P  V +  L+    K    DV + + KKM+  
Sbjct: 55  RLSKTRLRDIKLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVL 114

Query: 460 GLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSA 519
           G+  D +T++++INC      +  A  +  +M+  G  P+ VT   ++    +      A
Sbjct: 115 GIRNDLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDA 174

Query: 520 LKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDL 579
           + L   M   G++PD V Y+ +++ L     +++A   F E+ RK   P+   Y  LV+ 
Sbjct: 175 VSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNG 234

Query: 580 WGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPS 639
              +     A      M++  + PNV T ++LL AF++ G++ +A  L + M+ + + P 
Sbjct: 235 LCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPD 294

Query: 640 LQTYTLLLS--CCTEARSPYDMGFCHELMAVSGHPAHMFLLSMPSPG-PDGQNVRDHVGS 696
           + TY+ L++  C  +     +  F  +LM   G  A +   +    G    + V D +  
Sbjct: 295 IVTYSSLINGLCLHDRIDEANQMF--DLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKL 352

Query: 697 FLEMMHSEDRESKRGLVDAVVDF 719
           F EM       S+RGLV   V +
Sbjct: 353 FREM-------SQRGLVSNTVTY 368



 Score = 66.6 bits (161), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 42/147 (28%), Positives = 68/147 (46%)

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
           Q G   +  TY T++    +A       +   QM   G  P++ TYN L+        L 
Sbjct: 358 QRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELE 417

Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
           +AL +F+ MQ    + D VTY T+I    K G ++ A  ++  +   GL PD  TY+ ++
Sbjct: 418 KALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMM 477

Query: 473 NCLGKAGHLQAAHQLFCEMVNQGCIPN 499
           + L   G L     L+ +M  +G + N
Sbjct: 478 SGLCTKGLLHEVEALYTKMKQEGLMKN 504


>gi|449494638|ref|XP_004159605.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g49730-like [Cucumis sativus]
          Length = 664

 Score =  148 bits (374), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 101/389 (25%), Positives = 174/389 (44%), Gaps = 41/389 (10%)

Query: 298 VESVSRILRQWKWG-PLAEEALGNTNYSMDAYQANQVLKQLQDH-TVALGFFNWLRRQAG 355
           VE V RILR++    P  E AL  +   M +    +VL +  D   +   FF W  +Q G
Sbjct: 100 VEKVYRILRKFHTRVPKLELALQESGVIMRSGLPERVLSRCGDAGNLGYRFFVWASKQPG 159

Query: 356 FKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVT---YNRLIHSYGRANYLN 412
           ++H    Y  M+  LG+ RQFGA+  L+++M ++   P ++T   +  L+  +     + 
Sbjct: 160 YRHSYEVYKAMIKTLGKMRQFGAVWALIEEMRKE--NPYMLTPEVFIVLMRRFASVRMVK 217

Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQA-------------- 458
           +A++V  +M   GCEPD   +  L+D   K G +  A  +++ M+               
Sbjct: 218 KAVEVLDEMPKYGCEPDEYVFGCLLDALCKNGSVKEAASLFEDMRVRFNPNLRHFTSLLY 277

Query: 459 --------------------AGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIP 498
                               AG  PD   Y+ ++    +AG ++ A  L  EM    C P
Sbjct: 278 GWCREGKIMEAKHVLVQIKEAGFEPDIVVYNNLLGGYAQAGKMRDAFDLLAEMKKVNCGP 337

Query: 499 NLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVF 558
           N  ++ I+I    K      A++++ +MQ +G E D VTY+ ++      G  D+A  + 
Sbjct: 338 NAASFTILIQSFCKTEKMDEAMRIFTEMQGSGCEADVVTYTTLISGFCKWGNTDKAYEIL 397

Query: 559 AEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRV 618
            +M +K   P +  Y  ++    K   + +  E  E M + G  P++   N+++    ++
Sbjct: 398 DDMIQKGHDPSQLSYLCIMMAHEKKEELEECMELIEEMRKIGCVPDLNIYNTMIRLVCKL 457

Query: 619 GQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
           G L +A  L   M   GL P L TY L++
Sbjct: 458 GDLKEAVRLWGEMQAGGLNPGLDTYILMV 486



 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 110/409 (26%), Positives = 170/409 (41%), Gaps = 33/409 (8%)

Query: 269 ERFSKPSREMKIPAGLAPFSRHFASTGNVVESVSRILRQWKWGPLAEEALGNTNYSMDAY 328
           E   K +  M  P       R FAS   V ++V  +    K+G   +E +      +DA 
Sbjct: 188 EEMRKENPYMLTPEVFIVLMRRFASVRMVKKAVEVLDEMPKYGCEPDEYVFGC--LLDAL 245

Query: 329 QANQVLKQ----LQDHTVALG---------FFNWLR--------------RQAGFKHDEH 361
             N  +K+     +D  V             + W R              ++AGF+ D  
Sbjct: 246 CKNGSVKEAASLFEDMRVRFNPNLRHFTSLLYGWCREGKIMEAKHVLVQIKEAGFEPDIV 305

Query: 362 TYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQM 421
            Y  ++G   +A +      LL +M +  C PN  ++  LI S+ +   ++EA+ +F +M
Sbjct: 306 VYNNLLGGYAQAGKMRDAFDLLAEMKKVNCGPNAASFTILIQSFCKTEKMDEAMRIFTEM 365

Query: 422 QVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHL 481
           Q  GCE D VTY TLI    K G  D A ++   M   G  P   +Y  I+    K   L
Sbjct: 366 QGSGCEADVVTYTTLISGFCKWGNTDKAYEILDDMIQKGHDPSQLSYLCIMMAHEKKEEL 425

Query: 482 QAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIV 541
           +   +L  EM   GC+P+L  YN MI L  K  + + A++L+ +MQ  G  P   TY ++
Sbjct: 426 EECMELIEEMRKIGCVPDLNIYNTMIRLVCKLGDLKEAVRLWGEMQAGGLNPGLDTYILM 485

Query: 542 MEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWG---KAGNVRKAWEWYEAMLQ 598
           +      G L EA   F EM  +  +   P YG L +L     +A  +  A   +  M  
Sbjct: 486 VHGFLSQGCLVEACDYFKEMVERGLL-SAPQYGTLKELTNALLRAEKLEMAKNMWSCMTT 544

Query: 599 AGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
            G   NV      + A    G + +A      M++  L P   T+  L+
Sbjct: 545 KGCELNVSAWTIWIHALFSNGHVKEACSYCLDMMDADLMPQPDTFAKLM 593



 Score = 72.4 bits (176), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 53/229 (23%), Positives = 100/229 (43%), Gaps = 37/229 (16%)

Query: 354 AGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNE 413
           +G + D  TYTT++    +        ++LD M++ G  P+ ++Y  ++ ++ +   L E
Sbjct: 368 SGCEADVVTYTTLISGFCKWGNTDKAYEILDDMIQKGHDPSQLSYLCIMMAHEKKEELEE 427

Query: 414 ALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII- 472
            +++ ++M+ +GC PD   Y T+I +  K G L  A+ ++ +MQA GL+P   TY +++ 
Sbjct: 428 CMELIEEMRKIGCVPDLNIYNTMIRLVCKLGDLKEAVRLWGEMQAGGLNPGLDTYILMVH 487

Query: 473 ------------------------------------NCLGKAGHLQAAHQLFCEMVNQGC 496
                                               N L +A  L+ A  ++  M  +GC
Sbjct: 488 GFLSQGCLVEACDYFKEMVERGLLSAPQYGTLKELTNALLRAEKLEMAKNMWSCMTTKGC 547

Query: 497 IPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVL 545
             N+  + I I       + + A     DM +A   P   T++ +M  L
Sbjct: 548 ELNVSAWTIWIHALFSNGHVKEACSYCLDMMDADLMPQPDTFAKLMRGL 596



 Score = 64.3 bits (155), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 43/188 (22%), Positives = 88/188 (46%), Gaps = 3/188 (1%)

Query: 461 LSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSAL 520
           L+P+ F   V++        ++ A ++  EM   GC P+   +  ++    K  + + A 
Sbjct: 198 LTPEVFI--VLMRRFASVRMVKKAVEVLDEMPKYGCEPDEYVFGCLLDALCKNGSVKEAA 255

Query: 521 KLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLW 580
            L+ DM+   F P+   ++ ++      G + EA+ V  +++   + PD  VY  L+  +
Sbjct: 256 SLFEDMR-VRFNPNLRHFTSLLYGWCREGKIMEAKHVLVQIKEAGFEPDIVVYNNLLGGY 314

Query: 581 GKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSL 640
            +AG +R A++    M +    PN  +   L+ +F +  ++ +A  +   M   G +  +
Sbjct: 315 AQAGKMRDAFDLLAEMKKVNCGPNAASFTILIQSFCKTEKMDEAMRIFTEMQGSGCEADV 374

Query: 641 QTYTLLLS 648
            TYT L+S
Sbjct: 375 VTYTTLIS 382



 Score = 59.7 bits (143), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 62/235 (26%), Positives = 104/235 (44%), Gaps = 18/235 (7%)

Query: 432 TYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEM 491
            Y  L   H +   L++A+     +  +GL P+     V+  C G AG+L   ++ F   
Sbjct: 103 VYRILRKFHTRVPKLELALQESGVIMRSGL-PE----RVLSRC-GDAGNL--GYRFFVWA 154

Query: 492 VNQ-GCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVT---YSIVMEVLGH 547
             Q G   +   Y  MI    K R + +   L  +M+     P  +T   + ++M     
Sbjct: 155 SKQPGYRHSYEVYKAMIKTLGKMRQFGAVWALIEEMRKEN--PYMLTPEVFIVLMRRFAS 212

Query: 548 CGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPT 607
              + +A  V  EM +    PDE V+G L+D   K G+V++A   +E M +    PN+  
Sbjct: 213 VRMVKKAVEVLDEMPKYGCEPDEYVFGCLLDALCKNGSVKEAASLFEDM-RVRFNPNLRH 271

Query: 608 CNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEA---RSPYDM 659
             SLL  + R G++ +A H+L  +   G +P +  Y  LL    +A   R  +D+
Sbjct: 272 FTSLLYGWCREGKIMEAKHVLVQIKEAGFEPDIVVYNNLLGGYAQAGKMRDAFDL 326


>gi|115438490|ref|NP_001043552.1| Os01g0611900 [Oryza sativa Japonica Group]
 gi|21104680|dbj|BAB93270.1| fertility restorer homologue-like [Oryza sativa Japonica Group]
 gi|113533083|dbj|BAF05466.1| Os01g0611900 [Oryza sativa Japonica Group]
 gi|125571150|gb|EAZ12665.1| hypothetical protein OsJ_02580 [Oryza sativa Japonica Group]
 gi|215767882|dbj|BAH00111.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 800

 Score =  148 bits (374), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 83/296 (28%), Positives = 149/296 (50%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           +Q G   +++TY T++  L    +   + ++L +   +G  P  +TYN +I+ + +A  +
Sbjct: 483 KQNGVSCNDYTYNTLINGLCVVGRVCEVGEMLKRFETEGFVPTAMTYNSIINGFIKAGMM 542

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
             A  V++QM   G  P+ VTY + ID + K    D+A+ M   ++  GL PD   Y+ +
Sbjct: 543 GSAFAVYQQMCAKGIPPNIVTYTSFIDGYCKTSCCDLALKMLNDVRCKGLRPDIAAYNSL 602

Query: 472 INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF 531
           I    + G++  A Q+   M+  G +PN+  YN  I      +  + AL+LY  M   G 
Sbjct: 603 IFGFCQEGNMSHALQVLVLMLKDGLLPNISVYNSFITGYKNLKMMEEALRLYEKMIKEGI 662

Query: 532 EPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWE 591
           + D  TY+ +++     G +  A  +++EM  K  +PD   +  L     + G++  A +
Sbjct: 663 DLDTATYTTLIDGFSKDGNVTFALKLYSEMVAKGNIPDHITFTALTHGLCRNGDIDDARK 722

Query: 592 WYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
             + M +  +RPNV   N L++ +LR G+L +A+ L   ML   + P   TY +L+
Sbjct: 723 LLDEMNRLDIRPNVLMYNMLINGYLRNGKLQEAFRLHDEMLERKIMPDDTTYDILV 778



 Score =  132 bits (333), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 106/439 (24%), Positives = 198/439 (45%), Gaps = 26/439 (5%)

Query: 329 QANQVLKQLQDH----------TVALGFFN---WLRRQAGFKH-------DEHTYTTMVG 368
           +A ++ +Q++DH           V  G  N   W    + FK        D  TY  ++ 
Sbjct: 335 KAYELCRQMRDHGLLPSTNEFNMVIKGLLNDKLWKDAVSLFKEMADSGIPDAFTYNILIH 394

Query: 369 ILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEP 428
            L + R+      L ++M   G +P +VTY+ L+  Y     ++EA+ ++ +M   G  P
Sbjct: 395 WLCQRRKIREALNLWEKMNETGVKPYIVTYHSLLLCYCVNGCMDEAVKLYTEMPGKGFTP 454

Query: 429 DRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLF 488
           + VTY TL+  H      D A  +  +M+  G+S + +TY+ +IN L   G +    ++ 
Sbjct: 455 NVVTYTTLMKGHINKAAFDKAYALLAEMKQNGVSCNDYTYNTLINGLCVVGRVCEVGEML 514

Query: 489 CEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHC 548
                +G +P  +TYN +I    KA    SA  +Y+ M   G  P+ VTY+  ++  G+C
Sbjct: 515 KRFETEGFVPTAMTYNSIINGFIKAGMMGSAFAVYQQMCAKGIPPNIVTYTSFID--GYC 572

Query: 549 --GYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVP 606
                D A  +  ++R K   PD   Y  L+  + + GN+  A +    ML+ GL PN+ 
Sbjct: 573 KTSCCDLALKMLNDVRCKGLRPDIAAYNSLIFGFCQEGNMSHALQVLVLMLKDGLLPNIS 632

Query: 607 TCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCT-EARSPYDMGFCHEL 665
             NS ++ +  +  + +A  L + M+  G+     TYT L+   + +    + +    E+
Sbjct: 633 VYNSFITGYKNLKMMEEALRLYEKMIKEGIDLDTATYTTLIDGFSKDGNVTFALKLYSEM 692

Query: 666 MAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRESKRGLVDAVVDFLHKSGL 725
           +A    P H+   ++ + G       D     L+ M+  D      + + +++   ++G 
Sbjct: 693 VAKGNIPDHITFTAL-THGLCRNGDIDDARKLLDEMNRLDIRPNVLMYNMLINGYLRNGK 751

Query: 726 KEEAGSVWEVAAQKNVYPD 744
            +EA  + +   ++ + PD
Sbjct: 752 LQEAFRLHDEMLERKIMPD 770



 Score =  123 bits (309), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 99/371 (26%), Positives = 166/371 (44%), Gaps = 60/371 (16%)

Query: 326 DAYQANQVLKQLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQ 385
           DA +A  VL+++QD     GF  W          + T+ ++V +L +  +      + D+
Sbjct: 227 DANRALLVLRKMQDA----GFVPW----------DFTFNSVVDVLVKGGRMEEALHIKDE 272

Query: 386 MVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGF 445
           ++  G + +VV    L+H Y     + +ALD+F++    G  P  VTY  LI    + G 
Sbjct: 273 LLATGKKMSVVLATTLMHGYCLQREVRKALDIFEETLRDGLVPTDVTYTVLIRGCTEEGM 332

Query: 446 LDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNI 505
            + A ++ ++M+  GL P T  ++++I  L      + A  LF EM + G IP+  TYNI
Sbjct: 333 PEKAYELCRQMRDHGLLPSTNEFNMVIKGLLNDKLWKDAVSLFKEMADSG-IPDAFTYNI 391

Query: 506 MIALQAKARNYQSAL-----------------------------------KLYRDMQNAG 530
           +I    + R  + AL                                   KLY +M   G
Sbjct: 392 LIHWLCQRRKIREALNLWEKMNETGVKPYIVTYHSLLLCYCVNGCMDEAVKLYTEMPGKG 451

Query: 531 FEPDKVTYSIVMEVLGHC--GYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRK 588
           F P+ VTY+ +M+  GH      D+A A+ AEM++     ++  Y  L++     G V +
Sbjct: 452 FTPNVVTYTTLMK--GHINKAAFDKAYALLAEMKQNGVSCNDYTYNTLINGLCVVGRVCE 509

Query: 589 AWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL- 647
             E  +     G  P   T NS+++ F++ G +  A+ + Q M   G+ P++ TYT  + 
Sbjct: 510 VGEMLKRFETEGFVPTAMTYNSIINGFIKAGMMGSAFAVYQQMCAKGIPPNIVTYTSFID 569

Query: 648 -----SCCTEA 653
                SCC  A
Sbjct: 570 GYCKTSCCDLA 580



 Score = 92.8 bits (229), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 57/218 (26%), Positives = 106/218 (48%)

Query: 362 TYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQM 421
           TYT+ +    +        K+L+ +   G +P++  YN LI  + +   ++ AL V   M
Sbjct: 563 TYTSFIDGYCKTSCCDLALKMLNDVRCKGLRPDIAAYNSLIFGFCQEGNMSHALQVLVLM 622

Query: 422 QVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHL 481
              G  P+   Y + I  +     ++ A+ +Y+KM   G+  DT TY+ +I+   K G++
Sbjct: 623 LKDGLLPNISVYNSFITGYKNLKMMEEALRLYEKMIKEGIDLDTATYTTLIDGFSKDGNV 682

Query: 482 QAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIV 541
             A +L+ EMV +G IP+ +T+  +     +  +   A KL  +M      P+ + Y+++
Sbjct: 683 TFALKLYSEMVAKGNIPDHITFTALTHGLCRNGDIDDARKLLDEMNRLDIRPNVLMYNML 742

Query: 542 MEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDL 579
           +      G L EA  +  EM  +  +PD+  Y +LV +
Sbjct: 743 INGYLRNGKLQEAFRLHDEMLERKIMPDDTTYDILVGM 780



 Score = 83.6 bits (205), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 65/271 (23%), Positives = 120/271 (44%), Gaps = 36/271 (13%)

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
           ++A+ +F +M     EPD+      I    K    + A+ + +KMQ AG  P  FT++ +
Sbjct: 194 DDAVRLFDEMPASEIEPDQRVCSVAIASLCKLRDANRALLVLRKMQDAGFVPWDFTFNSV 253

Query: 472 INCLGKAGHLQAAHQ-----------------------------------LFCEMVNQGC 496
           ++ L K G ++ A                                     +F E +  G 
Sbjct: 254 VDVLVKGGRMEEALHIKDELLATGKKMSVVLATTLMHGYCLQREVRKALDIFEETLRDGL 313

Query: 497 IPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEA 556
           +P  VTY ++I    +    + A +L R M++ G  P    +++V++ L +     +A +
Sbjct: 314 VPTDVTYTVLIRGCTEEGMPEKAYELCRQMRDHGLLPSTNEFNMVIKGLLNDKLWKDAVS 373

Query: 557 VFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFL 616
           +F EM   + +PD   Y +L+    +   +R+A   +E M + G++P + T +SLL  + 
Sbjct: 374 LFKEM-ADSGIPDAFTYNILIHWLCQRRKIREALNLWEKMNETGVKPYIVTYHSLLLCYC 432

Query: 617 RVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
             G + +A  L   M   G  P++ TYT L+
Sbjct: 433 VNGCMDEAVKLYTEMPGKGFTPNVVTYTTLM 463



 Score = 76.6 bits (187), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 55/205 (26%), Positives = 94/205 (45%), Gaps = 36/205 (17%)

Query: 342 VALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRL 401
           +AL   N +R + G + D   Y +++    +        ++L  M++DG  PN+  YN  
Sbjct: 579 LALKMLNDVRCK-GLRPDIAAYNSLIFGFCQEGNMSHALQVLVLMLKDGLLPNISVYNSF 637

Query: 402 IHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGL 461
           I  Y     + EAL ++++M   G + D  TY TLID  +K G +  A+ +Y +M A G 
Sbjct: 638 ITGYKNLKMMEEALRLYEKMIKEGIDLDTATYTTLIDGFSKDGNVTFALKLYSEMVAKGN 697

Query: 462 SPD--TFT---------------------------------YSVIINCLGKAGHLQAAHQ 486
            PD  TFT                                 Y+++IN   + G LQ A +
Sbjct: 698 IPDHITFTALTHGLCRNGDIDDARKLLDEMNRLDIRPNVLMYNMLINGYLRNGKLQEAFR 757

Query: 487 LFCEMVNQGCIPNLVTYNIMIALQA 511
           L  EM+ +  +P+  TY+I++ +++
Sbjct: 758 LHDEMLERKIMPDDTTYDILVGMKS 782



 Score = 72.8 bits (177), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 67/252 (26%), Positives = 111/252 (44%)

Query: 421 MQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGH 480
           M+  G  PD  +   L+ + A++     A+ +  +M+  G   D + + V++    K G 
Sbjct: 133 MEARGVTPDAKSRTDLLAVTARSASAADALALLAEMRGKGRPLDAWMFDVVMRACFKEGM 192

Query: 481 LQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSI 540
              A +LF EM      P+    ++ IA   K R+   AL + R MQ+AGF P   T++ 
Sbjct: 193 YDDAVRLFDEMPASEIEPDQRVCSVAIASLCKLRDANRALLVLRKMQDAGFVPWDFTFNS 252

Query: 541 VMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAG 600
           V++VL   G ++EA  +  E+          +   L+  +     VRKA + +E  L+ G
Sbjct: 253 VVDVLVKGGRMEEALHIKDELLATGKKMSVVLATTLMHGYCLQREVRKALDIFEETLRDG 312

Query: 601 LRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMG 660
           L P   T   L+      G    AY L + M + GL PS   + +++      +   D  
Sbjct: 313 LVPTDVTYTVLIRGCTEEGMPEKAYELCRQMRDHGLLPSTNEFNMVIKGLLNDKLWKDAV 372

Query: 661 FCHELMAVSGHP 672
              + MA SG P
Sbjct: 373 SLFKEMADSGIP 384


>gi|255660806|gb|ACU25572.1| pentatricopeptide repeat-containing protein [Glandularia flava]
          Length = 418

 Score =  148 bits (374), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 84/279 (30%), Positives = 152/279 (54%)

Query: 370 LGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPD 429
           L + + F  +    ++ +  G   ++  +N L+HS+ +   +  A  VF  +   G  P 
Sbjct: 111 LMKLKYFKLVWGFYEESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPS 170

Query: 430 RVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFC 489
            V++ TL++ + K G LD    +   MQA+G+ PD +TYSV+IN L K   ++ A++LF 
Sbjct: 171 VVSFNTLMNGYIKLGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMEDANELFE 230

Query: 490 EMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCG 549
           EM++ G +PN VT+  +I    K      A+++Y+ M +    PD +TY+ ++  L   G
Sbjct: 231 EMLDNGLVPNGVTFTTLIDGHCKNGRVXLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKG 290

Query: 550 YLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCN 609
            L +A+ +  EM  K   PD+  Y  L+D   K G++  A  + + M++  +R +     
Sbjct: 291 DLKQAQDLIDEMSMKGLKPDKITYTTLIDGSCKEGDLETAXXYRKRMIKENIRLDDVAYT 350

Query: 610 SLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
           +L+S   + G+  DA  +L+ ML++GLKP + TYT++++
Sbjct: 351 ALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIIN 389



 Score =  122 bits (305), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 79/316 (25%), Positives = 155/316 (49%), Gaps = 10/316 (3%)

Query: 335 KQLQDHTVALGFFNWL------RRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVR 388
           +++ +H + L +F  +        + G+    + +  ++    +  +      + D + +
Sbjct: 105 RKVLEHLMKLKYFKLVWGFYEESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITK 164

Query: 389 DGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDV 448
            G +P+VV++N L++ Y +   L+E   +   MQ  G +PD  TY  LI+   K   ++ 
Sbjct: 165 WGLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMED 224

Query: 449 AMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIA 508
           A +++++M   GL P+  T++ +I+   K G +  A +++ +M++Q   P+L+TYN +I 
Sbjct: 225 ANELFEEMLDNGLVPNGVTFTTLIDGHCKNGRVXLAMEIYKQMLSQSLSPDLITYNTLIY 284

Query: 509 LQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHC--GYLDEAEAVFAEMRRKNW 566
              K  + + A  L  +M   G +PDK+TY+ +++  G C  G L+ A      M ++N 
Sbjct: 285 GLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLID--GSCKEGDLETAXXYRKRMIKENI 342

Query: 567 VPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYH 626
             D+  Y  L+    + G    A +    ML  GL+P + T   +++ F + G +     
Sbjct: 343 RLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSK 402

Query: 627 LLQGMLNLGLKPSLQT 642
           LL+ M   G  PS+ T
Sbjct: 403 LLKEMQRDGYVPSVVT 418



 Score = 57.4 bits (137), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 36/159 (22%), Positives = 79/159 (49%), Gaps = 1/159 (0%)

Query: 497 IPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEA 556
           I ++  ++ +I    ++   + A++ YR  +   F     T   V+E L    Y      
Sbjct: 63  ISDIYVFSGLIIAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWG 122

Query: 557 VFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFL 616
            + E     +      + +L+  + K G +R A   ++A+ + GLRP+V + N+L++ ++
Sbjct: 123 FYEESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYI 182

Query: 617 RVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS-CCTEAR 654
           ++G L + + L   M   G++P + TY++L++  C E++
Sbjct: 183 KLGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESK 221


>gi|326527027|dbj|BAK04455.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 860

 Score =  148 bits (374), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 83/264 (31%), Positives = 138/264 (52%), Gaps = 2/264 (0%)

Query: 382 LLDQMVRDG--CQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDI 439
           L   M ++G  C PNVV YN +IH + +     +A  +F +M   G +PD VTY  +ID 
Sbjct: 250 LFQMMAKEGGACSPNVVAYNTVIHGFFKEGETGKACSLFHEMTRQGVKPDVVTYNLIIDA 309

Query: 440 HAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPN 499
             KA  +D A  + ++M   G  PDT TY+ +I+     G L+ A ++F +M ++G IPN
Sbjct: 310 LCKARAMDKAELVLRQMTTNGAQPDTVTYNCMIHGYATLGRLKEAAKMFRKMKSRGLIPN 369

Query: 500 LVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFA 559
           +V  N  +A   K    + A +++  M   G +PD V+Y  ++      G+  +   +F 
Sbjct: 370 IVICNSFLASLCKHGRSKEAAEIFDSMTAKGHKPDIVSYCTLLHGYASEGWFADMIGLFN 429

Query: 560 EMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVG 619
            M+      D  V+ +L+  + K G V  A   +  M Q G+ P+V T ++++SAF R+G
Sbjct: 430 SMKSNGIAADCRVFNILIHAYAKRGMVDDAMLIFTEMQQQGVSPDVVTYSTVISAFSRMG 489

Query: 620 QLSDAYHLLQGMLNLGLKPSLQTY 643
           +L+DA      M+  G++P+   Y
Sbjct: 490 RLTDAMEKFNQMVARGIQPNTAVY 513



 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 95/368 (25%), Positives = 182/368 (49%), Gaps = 13/368 (3%)

Query: 300 SVSRILRQWKWGPLAEEALGNTNYSM-------DAYQANQVLKQLQDHTV---ALGFFNW 349
           + S +L+   +    EEA+    + M       + +  + +LK L D+++   AL  F  
Sbjct: 194 TASTLLKCLCYANRTEEAVNVLLHRMSELGCVPNVFSYSIILKGLCDNSMSQRALDLFQM 253

Query: 350 LRRQAG-FKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRA 408
           + ++ G    +   Y T++    +  + G    L  +M R G +P+VVTYN +I +  +A
Sbjct: 254 MAKEGGACSPNVVAYNTVIHGFFKEGETGKACSLFHEMTRQGVKPDVVTYNLIIDALCKA 313

Query: 409 NYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTY 468
             +++A  V +QM   G +PD VTY  +I  +A  G L  A  M++KM++ GL P+    
Sbjct: 314 RAMDKAELVLRQMTTNGAQPDTVTYNCMIHGYATLGRLKEAAKMFRKMKSRGLIPNIVIC 373

Query: 469 SVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQN 528
           +  +  L K G  + A ++F  M  +G  P++V+Y  ++   A    +   + L+  M++
Sbjct: 374 NSFLASLCKHGRSKEAAEIFDSMTAKGHKPDIVSYCTLLHGYASEGWFADMIGLFNSMKS 433

Query: 529 AGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRK 588
            G   D   ++I++      G +D+A  +F EM+++   PD   Y  ++  + + G +  
Sbjct: 434 NGIAADCRVFNILIHAYAKRGMVDDAMLIFTEMQQQGVSPDVVTYSTVISAFSRMGRLTD 493

Query: 589 AWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGL-KPSLQTY-TLL 646
           A E +  M+  G++PN    +S++  F   G L  A  L+  M+N G+ +P +  + +++
Sbjct: 494 AMEKFNQMVARGIQPNTAVYHSIIQGFCMHGGLVKAKELVSEMINKGIPRPDIVFFNSVI 553

Query: 647 LSCCTEAR 654
            S C + R
Sbjct: 554 NSLCKDGR 561



 Score =  125 bits (314), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 86/313 (27%), Positives = 151/313 (48%), Gaps = 7/313 (2%)

Query: 342 VALGFFNWL-RRQAGFK---HDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVT 397
           +AL  FN + R QAG +      HTY+ ++    RAR+      L   ++R G + + +T
Sbjct: 135 LALALFNRVCREQAGPRVVPLTVHTYSILMDCCCRARRPDLGLVLFGCILRTGLKIHQIT 194

Query: 398 YNRLIHSYGRANYLNEALDV-FKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKM 456
            + L+     AN   EA++V   +M  +GC P+  +Y  ++           A+D+++ M
Sbjct: 195 ASTLLKCLCYANRTEEAVNVLLHRMSELGCVPNVFSYSIILKGLCDNSMSQRALDLFQMM 254

Query: 457 QAAG--LSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKAR 514
              G   SP+   Y+ +I+   K G    A  LF EM  QG  P++VTYN++I    KAR
Sbjct: 255 AKEGGACSPNVVAYNTVIHGFFKEGETGKACSLFHEMTRQGVKPDVVTYNLIIDALCKAR 314

Query: 515 NYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYG 574
               A  + R M   G +PD VTY+ ++      G L EA  +F +M+ +  +P+  +  
Sbjct: 315 AMDKAELVLRQMTTNGAQPDTVTYNCMIHGYATLGRLKEAAKMFRKMKSRGLIPNIVICN 374

Query: 575 LLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNL 634
             +    K G  ++A E +++M   G +P++ +  +LL  +   G  +D   L   M + 
Sbjct: 375 SFLASLCKHGRSKEAAEIFDSMTAKGHKPDIVSYCTLLHGYASEGWFADMIGLFNSMKSN 434

Query: 635 GLKPSLQTYTLLL 647
           G+    + + +L+
Sbjct: 435 GIAADCRVFNILI 447



 Score =  115 bits (287), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 67/267 (25%), Positives = 132/267 (49%)

Query: 382 LLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHA 441
           + D +   G +P+V+T+  LI  Y     +++A  +   M+VVG E D VTY TL+D + 
Sbjct: 568 IFDLVTDIGERPDVITFTSLIDGYCLVGKMDKAFKILDAMEVVGVETDIVTYSTLLDGYF 627

Query: 442 KAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLV 501
           K G ++  + ++++MQ  G+ P+T TY +++  L +AG   AA + F EM+  G    + 
Sbjct: 628 KNGRINDGLTLFREMQRKGVKPNTVTYGIMLAGLFRAGRTVAARKKFHEMIESGTTVTVS 687

Query: 502 TYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEM 561
            Y I++    +      A+ L++ +     +      + ++  +      +EA+ +FA +
Sbjct: 688 IYGIILGGLCRNNCADEAIILFQKLGTMNVKFSITILNTMINAMYKVQRKEEAKELFATI 747

Query: 562 RRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQL 621
                +P+E  YG+++    K G V  A   + +M ++G+ P     N ++   L  G++
Sbjct: 748 SASGLLPNESTYGVMIINLLKDGAVEDANNMFSSMEKSGIVPGSRLLNRIIRMLLEKGEI 807

Query: 622 SDAYHLLQGMLNLGLKPSLQTYTLLLS 648
           + A + L  +    +     T +L+LS
Sbjct: 808 AKAGNYLSKVDGKRILLEASTTSLMLS 834



 Score =  115 bits (287), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 82/330 (24%), Positives = 143/330 (43%), Gaps = 36/330 (10%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           G K D  +Y T++        F  +  L + M  +G   +   +N LIH+Y +   +++A
Sbjct: 400 GHKPDIVSYCTLLHGYASEGWFADMIGLFNSMKSNGIAADCRVFNILIHAYAKRGMVDDA 459

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
           + +F +MQ  G  PD VTY T+I   ++ G L  AM+ + +M A G+ P+T  Y  II  
Sbjct: 460 MLIFTEMQQQGVSPDVVTYSTVISAFSRMGRLTDAMEKFNQMVARGIQPNTAVYHSIIQG 519

Query: 475 LGKAGHLQAAHQLFCEMVNQG----------------CI--------------------P 498
               G L  A +L  EM+N+G                C                     P
Sbjct: 520 FCMHGGLVKAKELVSEMINKGIPRPDIVFFNSVINSLCKDGRVMDAHDIFDLVTDIGERP 579

Query: 499 NLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVF 558
           +++T+  +I           A K+   M+  G E D VTYS +++     G +++   +F
Sbjct: 580 DVITFTSLIDGYCLVGKMDKAFKILDAMEVVGVETDIVTYSTLLDGYFKNGRINDGLTLF 639

Query: 559 AEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRV 618
            EM+RK   P+   YG+++    +AG    A + +  M+++G    V     +L    R 
Sbjct: 640 REMQRKGVKPNTVTYGIMLAGLFRAGRTVAARKKFHEMIESGTTVTVSIYGIILGGLCRN 699

Query: 619 GQLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
               +A  L Q +  + +K S+     +++
Sbjct: 700 NCADEAIILFQKLGTMNVKFSITILNTMIN 729



 Score =  109 bits (273), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 70/259 (27%), Positives = 125/259 (48%), Gaps = 1/259 (0%)

Query: 381 KLLDQMVRDGC-QPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDI 439
           +L+ +M+  G  +P++V +N +I+S  +   + +A D+F  +  +G  PD +T+ +LID 
Sbjct: 531 ELVSEMINKGIPRPDIVFFNSVINSLCKDGRVMDAHDIFDLVTDIGERPDVITFTSLIDG 590

Query: 440 HAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPN 499
           +   G +D A  +   M+  G+  D  TYS +++   K G +     LF EM  +G  PN
Sbjct: 591 YCLVGKMDKAFKILDAMEVVGVETDIVTYSTLLDGYFKNGRINDGLTLFREMQRKGVKPN 650

Query: 500 LVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFA 559
            VTY IM+A   +A    +A K + +M  +G       Y I++  L      DEA  +F 
Sbjct: 651 TVTYGIMLAGLFRAGRTVAARKKFHEMIESGTTVTVSIYGIILGGLCRNNCADEAIILFQ 710

Query: 560 EMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVG 619
           ++   N      +   +++   K     +A E +  +  +GL PN  T   ++   L+ G
Sbjct: 711 KLGTMNVKFSITILNTMINAMYKVQRKEEAKELFATISASGLLPNESTYGVMIINLLKDG 770

Query: 620 QLSDAYHLLQGMLNLGLKP 638
            + DA ++   M   G+ P
Sbjct: 771 AVEDANNMFSSMEKSGIVP 789



 Score = 90.1 bits (222), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 64/280 (22%), Positives = 128/280 (45%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           G + D  T+T+++       +     K+LD M   G + ++VTY+ L+  Y +   +N+ 
Sbjct: 576 GERPDVITFTSLIDGYCLVGKMDKAFKILDAMEVVGVETDIVTYSTLLDGYFKNGRINDG 635

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
           L +F++MQ  G +P+ VTY  ++    +AG    A   + +M  +G +     Y +I+  
Sbjct: 636 LTLFREMQRKGVKPNTVTYGIMLAGLFRAGRTVAARKKFHEMIESGTTVTVSIYGIILGG 695

Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPD 534
           L +      A  LF ++       ++   N MI    K +  + A +L+  +  +G  P+
Sbjct: 696 LCRNNCADEAIILFQKLGTMNVKFSITILNTMINAMYKVQRKEEAKELFATISASGLLPN 755

Query: 535 KVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYE 594
           + TY +++  L   G +++A  +F+ M +   VP   +   ++ +  + G + KA  +  
Sbjct: 756 ESTYGVMIINLLKDGAVEDANNMFSSMEKSGIVPGSRLLNRIIRMLLEKGEIAKAGNYLS 815

Query: 595 AMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNL 634
            +    +     T + +LS F R G+  +   LL    N 
Sbjct: 816 KVDGKRILLEASTTSLMLSLFSRKGKYHEDMKLLPAKYNF 855



 Score = 62.8 bits (151), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 52/193 (26%), Positives = 89/193 (46%), Gaps = 7/193 (3%)

Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLI 402
            L  F  ++R+ G K +  TY  M+  L RA +  A  K   +M+  G    V  Y  ++
Sbjct: 635 GLTLFREMQRK-GVKPNTVTYGIMLAGLFRAGRTVAARKKFHEMIESGTTVTVSIYGIIL 693

Query: 403 HSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLS 462
               R N  +EA+ +F+++  +  +       T+I+   K    + A +++  + A+GL 
Sbjct: 694 GGLCRNNCADEAIILFQKLGTMNVKFSITILNTMINAMYKVQRKEEAKELFATISASGLL 753

Query: 463 PDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQ------AKARNY 516
           P+  TY V+I  L K G ++ A+ +F  M   G +P     N +I +       AKA NY
Sbjct: 754 PNESTYGVMIINLLKDGAVEDANNMFSSMEKSGIVPGSRLLNRIIRMLLEKGEIAKAGNY 813

Query: 517 QSALKLYRDMQNA 529
            S +   R +  A
Sbjct: 814 LSKVDGKRILLEA 826


>gi|255660848|gb|ACU25593.1| pentatricopeptide repeat-containing protein [Citharexylum
           ligustrinum]
          Length = 418

 Score =  148 bits (374), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 86/295 (29%), Positives = 154/295 (52%), Gaps = 11/295 (3%)

Query: 370 LGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPD 429
           L + + F  +     +++  G   ++  +N L+H + +   +  A  VF  +   G  P 
Sbjct: 111 LMKLKYFKLVWGFYKEILECGYPTSLYFFNILMHRFCKEGEIRLAQSVFDAITKCGLRPS 170

Query: 430 RVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFC 489
            V++ TLI+ + + G LD    +   M A+G+ PD +T +V+IN L K   +  A++LF 
Sbjct: 171 VVSFNTLINGYIRLGDLDKGFRLKTAMHASGVHPDVYTNTVLINGLCKESKMDEANELFN 230

Query: 490 EMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCG 549
           EM+++G +PN VT+  +I    K+     AL++Y+ M   G+ PD +TY+ ++  L   G
Sbjct: 231 EMLDKGLVPNGVTFTTLIDGHCKSGRVDLALEIYKQMLRQGYSPDLITYNTLIYGLCRKG 290

Query: 550 YLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCN 609
            L +A  +  EM  K   PD+  Y  L+D   K G++  A+E  + M++  +R +     
Sbjct: 291 DLKQARDLIVEMSMKGLKPDKITYTTLIDGSCKEGDLETAFELRKRMIEESIRLDDVAYT 350

Query: 610 SLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGFCHE 664
           +L+S   + G+  DA  +L+ ML++GLKP   TYT++++           GFC +
Sbjct: 351 ALISGLCQEGRAVDAEKMLREMLSVGLKPENGTYTMIIN-----------GFCKQ 394



 Score =  119 bits (297), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 71/227 (31%), Positives = 119/227 (52%)

Query: 381 KLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIH 440
           +L   M   G  P+V T   LI+   + + ++EA ++F +M   G  P+ VT+ TLID H
Sbjct: 192 RLKTAMHASGVHPDVYTNTVLINGLCKESKMDEANELFNEMLDKGLVPNGVTFTTLIDGH 251

Query: 441 AKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNL 500
            K+G +D+A+++YK+M   G SPD  TY+ +I  L + G L+ A  L  EM  +G  P+ 
Sbjct: 252 CKSGRVDLALEIYKQMLRQGYSPDLITYNTLIYGLCRKGDLKQARDLIVEMSMKGLKPDK 311

Query: 501 VTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAE 560
           +TY  +I    K  + ++A +L + M       D V Y+ ++  L   G   +AE +  E
Sbjct: 312 ITYTTLIDGSCKEGDLETAFELRKRMIEESIRLDDVAYTALISGLCQEGRAVDAEKMLRE 371

Query: 561 MRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPT 607
           M      P+   Y ++++ + K G+V+ A +  + M + G  P V T
Sbjct: 372 MLSVGLKPENGTYTMIINGFCKQGDVKTASKLLKEMQRDGHVPCVVT 418


>gi|302762244|ref|XP_002964544.1| hypothetical protein SELMODRAFT_82221 [Selaginella moellendorffii]
 gi|300168273|gb|EFJ34877.1| hypothetical protein SELMODRAFT_82221 [Selaginella moellendorffii]
          Length = 528

 Score =  148 bits (374), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 90/296 (30%), Positives = 151/296 (51%), Gaps = 5/296 (1%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           GF  D  TY+T++  L +A +      + ++M    C P  +TYN LI  Y RA  ++EA
Sbjct: 209 GFTPDIVTYSTVIDGLCKAGRLRDAVDIFEEM---SCAPTAITYNSLIGGYCRAGDMDEA 265

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
           + +  +M    C PD VTY TL+    K G LD A +++++M A  LSPD  T++ +++ 
Sbjct: 266 IRLLGKMVDDKCAPDVVTYTTLMSAFCKMGRLDDAYELFQQMVANKLSPDVVTFTSLVDG 325

Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPD 534
           L   G ++ A +L  E+  +GC P + TYN ++    KA   + A +L  D ++ GF P+
Sbjct: 326 LCGEGRMEDALELLEEITRRGCPPTIYTYNCVVDGYCKANQVRKAEELVADFRSRGFVPN 385

Query: 535 KVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPV--YGLLVDLWGKAGNVRKAWEW 592
            VTY+I++      G  D+A     ++  +       V  Y +++D   + G    A ++
Sbjct: 386 TVTYNILVAGCCRAGRTDQALQYLDQLNSEGGPCPTSVAMYAIILDALCRDGRTDDAVQF 445

Query: 593 YEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
           YE M+Q G  P   T  +++ A  +  Q   A+ LL+ M+  G  P   T   ++S
Sbjct: 446 YEEMIQRGYVPAAATFATVVFALCKAHQPQQAHELLEEMIKYGHTPGPGTCDAVVS 501



 Score =  146 bits (369), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 99/315 (31%), Positives = 160/315 (50%), Gaps = 10/315 (3%)

Query: 343 ALGFFNWLRRQAGFKH--DEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNR 400
           ALG +    RQ    H  D  TYT +V  L +AR+     ++L +MV     P+  T   
Sbjct: 24  ALGVY----RQMNDAHPPDFLTYTKLVHGLSKARRLRDAVQVLQEMVSARHVPDNTTLTV 79

Query: 401 LIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAG 460
           ++ S    + +++A ++ ++M   G   + +TY  L+D   K   LD A+ + + M   G
Sbjct: 80  VVQSLCLGDRVDDARELVEEMLHRGMAANAITYSALVDGLCKCERLDEAVALVETMAERG 139

Query: 461 LSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSAL 520
            +P   TY+ II    +A  +  AH    +MV +GC P+++TY  +I    K+R+    L
Sbjct: 140 CAPTVVTYNSIITGFCRARRVDEAHGFMEQMVAEGCHPDIITYTALIGGFCKSRDVGRGL 199

Query: 521 KLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLW 580
           +L  ++   GF PD VTYS V++ L   G L +A  +F EM   +  P    Y  L+  +
Sbjct: 200 ELLGEVTRRGFTPDIVTYSTVIDGLCKAGRLRDAVDIFEEM---SCAPTAITYNSLIGGY 256

Query: 581 GKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSL 640
            +AG++ +A      M+     P+V T  +L+SAF ++G+L DAY L Q M+   L P +
Sbjct: 257 CRAGDMDEAIRLLGKMVDDKCAPDVVTYTTLMSAFCKMGRLDDAYELFQQMVANKLSPDV 316

Query: 641 QTYTLLLS-CCTEAR 654
            T+T L+   C E R
Sbjct: 317 VTFTSLVDGLCGEGR 331



 Score = 89.7 bits (221), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 53/187 (28%), Positives = 99/187 (52%), Gaps = 1/187 (0%)

Query: 461 LSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSAL 520
           ++P T  ++V+I  L +AG L+ A  ++ +M N    P+ +TY  ++   +KAR  + A+
Sbjct: 1   MNPGTLLHNVVIGGLCRAGRLRHALGVYRQM-NDAHPPDFLTYTKLVHGLSKARRLRDAV 59

Query: 521 KLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLW 580
           ++ ++M +A   PD  T ++V++ L     +D+A  +  EM  +    +   Y  LVD  
Sbjct: 60  QVLQEMVSARHVPDNTTLTVVVQSLCLGDRVDDARELVEEMLHRGMAANAITYSALVDGL 119

Query: 581 GKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSL 640
            K   + +A    E M + G  P V T NS+++ F R  ++ +A+  ++ M+  G  P +
Sbjct: 120 CKCERLDEAVALVETMAERGCAPTVVTYNSIITGFCRARRVDEAHGFMEQMVAEGCHPDI 179

Query: 641 QTYTLLL 647
            TYT L+
Sbjct: 180 ITYTALI 186



 Score = 86.7 bits (213), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 57/207 (27%), Positives = 103/207 (49%), Gaps = 4/207 (1%)

Query: 359 DEHTYTTMV-GILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDV 417
           D  T+T++V G+ G  R   A+ +LL+++ R GC P + TYN ++  Y +AN + +A ++
Sbjct: 315 DVVTFTSLVDGLCGEGRMEDAL-ELLEEITRRGCPPTIYTYNCVVDGYCKANQVRKAEEL 373

Query: 418 FKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAG--LSPDTFTYSVIINCL 475
               +  G  P+ VTY  L+    +AG  D A+    ++ + G         Y++I++ L
Sbjct: 374 VADFRSRGFVPNTVTYNILVAGCCRAGRTDQALQYLDQLNSEGGPCPTSVAMYAIILDAL 433

Query: 476 GKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDK 535
            + G    A Q + EM+ +G +P   T+  ++    KA   Q A +L  +M   G  P  
Sbjct: 434 CRDGRTDDAVQFYEEMIQRGYVPAAATFATVVFALCKAHQPQQAHELLEEMIKYGHTPGP 493

Query: 536 VTYSIVMEVLGHCGYLDEAEAVFAEMR 562
            T   V+      G + +A+ + +E+R
Sbjct: 494 GTCDAVVSAYCRAGMIQKADELASELR 520



 Score = 72.8 bits (177), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 64/244 (26%), Positives = 106/244 (43%), Gaps = 15/244 (6%)

Query: 498 PNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAV 557
           P  + +N++I    +A   + AL +YR M +A   PD +TY+ ++  L     L +A  V
Sbjct: 3   PGTLLHNVVIGGLCRAGRLRHALGVYRQMNDA-HPPDFLTYTKLVHGLSKARRLRDAVQV 61

Query: 558 FAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLR 617
             EM     VPD     ++V        V  A E  E ML  G+  N  T ++L+    +
Sbjct: 62  LQEMVSARHVPDNTTLTVVVQSLCLGDRVDDARELVEEMLHRGMAANAITYSALVDGLCK 121

Query: 618 VGQLSDAYHLLQGMLNLGLKPSLQTY-TLLLSCCTEARSPYDMGFCHELMAVSGHPAHMF 676
             +L +A  L++ M   G  P++ TY +++   C   R     GF  +++A   HP  + 
Sbjct: 122 CERLDEAVALVETMAERGCAPTVVTYNSIITGFCRARRVDEAHGFMEQMVAEGCHPDIIT 181

Query: 677 LLSMPSPGPDGQNVRDHVGSFLEMMHSEDRESKRGLV------DAVVDFLHKSGLKEEAG 730
             ++      G      VG  LE++    R   RG          V+D L K+G   +A 
Sbjct: 182 YTALIG----GFCKSRDVGRGLELLGEVTR---RGFTPDIVTYSTVIDGLCKAGRLRDAV 234

Query: 731 SVWE 734
            ++E
Sbjct: 235 DIFE 238



 Score = 67.8 bits (164), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 50/173 (28%), Positives = 77/173 (44%), Gaps = 8/173 (4%)

Query: 361 HTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQ 420
           +TY  +V    +A Q     +L+      G  PN VTYN L+    RA   ++AL    Q
Sbjct: 352 YTYNCVVDGYCKANQVRKAEELVADFRSRGFVPNTVTYNILVAGCCRAGRTDQALQYLDQ 411

Query: 421 MQVVG--CEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKA 478
           +   G  C      Y  ++D   + G  D A+  Y++M   G  P   T++ ++  L KA
Sbjct: 412 LNSEGGPCPTSVAMYAIILDALCRDGRTDDAVQFYEEMIQRGYVPAAATFATVVFALCKA 471

Query: 479 GHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSA------LKLYRD 525
              Q AH+L  EM+  G  P   T + +++   +A   Q A      L+LY D
Sbjct: 472 HQPQQAHELLEEMIKYGHTPGPGTCDAVVSAYCRAGMIQKADELASELRLYTD 524


>gi|159464329|ref|XP_001690394.1| hypothetical protein CHLREDRAFT_114572 [Chlamydomonas reinhardtii]
 gi|158279894|gb|EDP05653.1| predicted protein [Chlamydomonas reinhardtii]
          Length = 287

 Score =  148 bits (374), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 88/287 (30%), Positives = 146/287 (50%), Gaps = 35/287 (12%)

Query: 361 HTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQ 420
           +TYTTM+   G  +Q     +L+ +M   G   NV TY+ L++   +AN L+ A DV+KQ
Sbjct: 1   YTYTTMISQCGSHQQLRRALELVAEMRSRGIDCNVHTYSALMNVCIKANELDLAQDVYKQ 60

Query: 421 MQVVGCEPDRVTYCTLIDIHA-----------------------------------KAGF 445
           M   GC P+ VTY  LID+ A                                   K+G 
Sbjct: 61  MLEEGCSPNLVTYNILIDVEASKRKTTERRRLAVALVRSGIQAEVRTYNTVISACNKSGQ 120

Query: 446 LDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNI 505
            + A+ +Y+KM AAG+ P   TY+ +I+  GK G ++ A  +F +M+ +GC  N++TY+ 
Sbjct: 121 PEQALKVYEKMLAAGVKPSATTYTALISAYGKKGQVEKALDIFRDMIRRGCERNVITYSS 180

Query: 506 MIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKN 565
           +I+   KA  ++ AL+L+  M     +P+ VTY+ ++    H G+ ++A  +F +M+ + 
Sbjct: 181 LISACEKAGRWEMALELFSKMHKENCKPNVVTYNSLIAACSHGGHWEKASELFEQMQTQG 240

Query: 566 WVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLL 612
             PD   Y  L+  + + G  R+A + +E M   G  P+    NSL+
Sbjct: 241 CKPDSITYCGLITAYERGGQWRRALKAFEQMQSQGCHPDAAVFNSLM 287



 Score =  122 bits (306), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 77/252 (30%), Positives = 123/252 (48%)

Query: 397 TYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKM 456
           TY  +I   G    L  AL++  +M+  G + +  TY  L+++  KA  LD+A D+YK+M
Sbjct: 2   TYTTMISQCGSHQQLRRALELVAEMRSRGIDCNVHTYSALMNVCIKANELDLAQDVYKQM 61

Query: 457 QAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNY 516
              G SP+  TY+++I+            +L   +V  G    + TYN +I+   K+   
Sbjct: 62  LEEGCSPNLVTYNILIDVEASKRKTTERRRLAVALVRSGIQAEVRTYNTVISACNKSGQP 121

Query: 517 QSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLL 576
           + ALK+Y  M  AG +P   TY+ ++   G  G +++A  +F +M R+    +   Y  L
Sbjct: 122 EQALKVYEKMLAAGVKPSATTYTALISAYGKKGQVEKALDIFRDMIRRGCERNVITYSSL 181

Query: 577 VDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGL 636
           +    KAG    A E +  M +   +PNV T NSL++A    G    A  L + M   G 
Sbjct: 182 ISACEKAGRWEMALELFSKMHKENCKPNVVTYNSLIAACSHGGHWEKASELFEQMQTQGC 241

Query: 637 KPSLQTYTLLLS 648
           KP   TY  L++
Sbjct: 242 KPDSITYCGLIT 253



 Score =  122 bits (305), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 59/190 (31%), Positives = 105/190 (55%)

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
           ++G + +  TY T++    ++ Q     K+ ++M+  G +P+  TY  LI +YG+   + 
Sbjct: 98  RSGIQAEVRTYNTVISACNKSGQPEQALKVYEKMLAAGVKPSATTYTALISAYGKKGQVE 157

Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
           +ALD+F+ M   GCE + +TY +LI    KAG  ++A++++ KM      P+  TY+ +I
Sbjct: 158 KALDIFRDMIRRGCERNVITYSSLISACEKAGRWEMALELFSKMHKENCKPNVVTYNSLI 217

Query: 473 NCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFE 532
                 GH + A +LF +M  QGC P+ +TY  +I    +   ++ ALK +  MQ+ G  
Sbjct: 218 AACSHGGHWEKASELFEQMQTQGCKPDSITYCGLITAYERGGQWRRALKAFEQMQSQGCH 277

Query: 533 PDKVTYSIVM 542
           PD   ++ +M
Sbjct: 278 PDAAVFNSLM 287



 Score =  115 bits (287), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 67/220 (30%), Positives = 112/220 (50%)

Query: 432 TYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEM 491
           TY T+I        L  A+++  +M++ G+  +  TYS ++N   KA  L  A  ++ +M
Sbjct: 2   TYTTMISQCGSHQQLRRALELVAEMRSRGIDCNVHTYSALMNVCIKANELDLAQDVYKQM 61

Query: 492 VNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYL 551
           + +GC PNLVTYNI+I ++A  R      +L   +  +G + +  TY+ V+      G  
Sbjct: 62  LEEGCSPNLVTYNILIDVEASKRKTTERRRLAVALVRSGIQAEVRTYNTVISACNKSGQP 121

Query: 552 DEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSL 611
           ++A  V+ +M      P    Y  L+  +GK G V KA + +  M++ G   NV T +SL
Sbjct: 122 EQALKVYEKMLAAGVKPSATTYTALISAYGKKGQVEKALDIFRDMIRRGCERNVITYSSL 181

Query: 612 LSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCT 651
           +SA  + G+   A  L   M     KP++ TY  L++ C+
Sbjct: 182 ISACEKAGRWEMALELFSKMHKENCKPNVVTYNSLIAACS 221



 Score = 88.2 bits (217), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 53/188 (28%), Positives = 98/188 (52%)

Query: 466 FTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRD 525
           +TY+ +I+  G    L+ A +L  EM ++G   N+ TY+ ++ +  KA     A  +Y+ 
Sbjct: 1   YTYTTMISQCGSHQQLRRALELVAEMRSRGIDCNVHTYSALMNVCIKANELDLAQDVYKQ 60

Query: 526 MQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGN 585
           M   G  P+ VTY+I+++V        E   +   + R     +   Y  ++    K+G 
Sbjct: 61  MLEEGCSPNLVTYNILIDVEASKRKTTERRRLAVALVRSGIQAEVRTYNTVISACNKSGQ 120

Query: 586 VRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTL 645
             +A + YE ML AG++P+  T  +L+SA+ + GQ+  A  + + M+  G + ++ TY+ 
Sbjct: 121 PEQALKVYEKMLAAGVKPSATTYTALISAYGKKGQVEKALDIFRDMIRRGCERNVITYSS 180

Query: 646 LLSCCTEA 653
           L+S C +A
Sbjct: 181 LISACEKA 188



 Score = 53.9 bits (128), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 49/214 (22%), Positives = 97/214 (45%), Gaps = 8/214 (3%)

Query: 537 TYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAM 596
           TY+ ++   G    L  A  + AEMR +    +   Y  L+++  KA  +  A + Y+ M
Sbjct: 2   TYTTMISQCGSHQQLRRALELVAEMRSRGIDCNVHTYSALMNVCIKANELDLAQDVYKQM 61

Query: 597 LQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSP 656
           L+ G  PN+ T N L+       + ++   L   ++  G++  ++TY  ++S C ++  P
Sbjct: 62  LEEGCSPNLVTYNILIDVEASKRKTTERRRLAVALVRSGIQAEVRTYNTVISACNKSGQP 121

Query: 657 YDMGFCHELMAVSG--HPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRESKRGLV- 713
                 +E M  +G    A  +   + + G  GQ V   +  F +M+    R  +R ++ 
Sbjct: 122 EQALKVYEKMLAAGVKPSATTYTALISAYGKKGQ-VEKALDIFRDMIR---RGCERNVIT 177

Query: 714 -DAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAV 746
             +++    K+G  E A  ++    ++N  P+ V
Sbjct: 178 YSSLISACEKAGRWEMALELFSKMHKENCKPNVV 211


>gi|297846140|ref|XP_002890951.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297336793|gb|EFH67210.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 689

 Score =  148 bits (374), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 127/556 (22%), Positives = 236/556 (42%), Gaps = 74/556 (13%)

Query: 221 LETHNVSSDNSDRRRIVQPRSKA----HSNRLNSNFKSNLQPSDAKVVECV--------- 267
           L +   SSD++  + +    SKA    + N L+S + SNLQ ++  +V            
Sbjct: 28  LNSRGFSSDSA--KTLAAGVSKAIKEGNFNLLDSVYGSNLQRNETNLVLLSLESEPNSAL 85

Query: 268 -------SERFSKPSREMKIPAGLAPFSRHFASTGNVVESVSR---ILRQWKWGPLAEEA 317
                  S+ F K  R   +P G++       + G V++++ R   + +   +  L  E 
Sbjct: 86  DTFDGQRSDSFDKLCRGGTVPFGVS-------AHGFVLDALFRKGEVTKALDFHRLVME- 137

Query: 318 LGNTNYSMDAYQANQVLKQLQ-DHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQF 376
                + +D    N++LK L  D          L    G   +  T+ T++    +  + 
Sbjct: 138 ---RGFRVDIVSCNKILKGLSVDQIEVASRMLSLVLDCGPAPNVVTFCTLINGFCKRGEM 194

Query: 377 GAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTL 436
               +L   M + G  P+++ Y+ LI  Y +A  L     +F Q    G + D V + + 
Sbjct: 195 DRAFELFKVMEQRGIAPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSST 254

Query: 437 IDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGC 496
           ID++ K G+L  A D+YK+M   G+SP+  TY+++I  L + G +  A  ++C+++ +G 
Sbjct: 255 IDVYVKFGYLTTAFDVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGIYCQILKRGL 314

Query: 497 IPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEA 556
            P++VTY+ +I    K  N +S   LY DM   G+ PD V Y ++++ L   G +  A  
Sbjct: 315 EPSVVTYSSLIDGFCKYGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLCKQGLMLHALR 374

Query: 557 VFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFL 616
              +   ++  P+  V+  L+D W +     +A + +  M   G++P+V T  +L+   +
Sbjct: 375 FSVKTLGQSIRPNVVVFNSLIDGWCRLNRCDEALKVFRLMGIYGIKPDVATITTLMRVTV 434

Query: 617 RVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGFCHELMAVSGHPAHMF 676
             G+L +   L   M  +GL+P    +  L+             FC              
Sbjct: 435 MEGRLKEGLFLFFRMFKMGLEPDAVAFCTLMD-----------AFC-------------- 469

Query: 677 LLSMPSPGPDGQNVRDHVG-SFLEMMHSEDRESKRGLVDAVVDFLHKSGLKEEAGSVWEV 735
                      +N++  +G    ++M      +   + + V++ L K    EEA   +  
Sbjct: 470 -----------KNMKPTIGLQLFDLMQRNKIPADIAVCNVVINLLFKGQSVEEASKFFNN 518

Query: 736 AAQKNVYPDAVKEKGM 751
             +  + PD V    M
Sbjct: 519 LLEGKMEPDIVTYNTM 534



 Score =  117 bits (294), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 109/458 (23%), Positives = 187/458 (40%), Gaps = 38/458 (8%)

Query: 344 LGFFNWLRRQA---GFKHDEHTYTTMVGILGRARQFGAINKLLD---QMVRDGCQPNVVT 397
           LG  + L  QA   G K D   +++ + +     +FG +    D   +M+  G  PNVVT
Sbjct: 229 LGMGHKLFSQALHKGVKLDVVVFSSTIDVY---VKFGYLTTAFDVYKRMLCQGISPNVVT 285

Query: 398 YNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQ 457
           Y  LI    +   + EA  ++ Q+   G EP  VTY +LID   K G L     +Y+ M 
Sbjct: 286 YTILIKGLCQDGRIYEAFGIYCQILKRGLEPSVVTYSSLIDGFCKYGNLRSGFALYEDMI 345

Query: 458 AAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQ 517
             G  PD   Y V+++ L K G +  A +   + + Q   PN+V +N +I    +     
Sbjct: 346 KMGYPPDVVIYGVLVDGLCKQGLMLHALRFSVKTLGQSIRPNVVVFNSLIDGWCRLNRCD 405

Query: 518 SALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLV 577
            ALK++R M   G +PD  T + +M V    G L E   +F  M +    PD   +  L+
Sbjct: 406 EALKVFRLMGIYGIKPDVATITTLMRVTVMEGRLKEGLFLFFRMFKMGLEPDAVAFCTLM 465

Query: 578 DLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLK 637
           D + K        + ++ M +  +  ++  CN +++   +   + +A      +L   ++
Sbjct: 466 DAFCKNMKPTIGLQLFDLMQRNKIPADIAVCNVVINLLFKGQSVEEASKFFNNLLEGKME 525

Query: 638 PSLQTYTLLLSCCTEARSPYDMGFCHELMAVSGHPAHMFLLSM------PSPGPDGQNVR 691
           P + TY  ++      R   +     E++  +    +   L++       +   DG  +R
Sbjct: 526 PDIVTYNTMICGYCSLRRLDEAARIFEMLKFTPFGPNAVTLTILIHTLCKNSDMDGA-LR 584

Query: 692 DHVGSFLEMMHSEDRESKRGLVDAVVDFLH----------------------KSGLKEEA 729
               S +      D   KRG VD   +  H                      K G   EA
Sbjct: 585 IISPSIISYSIIIDGLCKRGRVDEATNIFHQAIDAKILPDVVAYAILIRGCCKVGRLVEA 644

Query: 730 GSVWEVAAQKNVYPDAVKEKGMSYWLINLHVMSDGTAV 767
             ++E   +  V PD + ++ +S +     +MS G  V
Sbjct: 645 ALLYEHMLRNGVKPDDLLQRALSEYKPPKWLMSKGVWV 682



 Score = 64.3 bits (155), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 68/291 (23%), Positives = 119/291 (40%), Gaps = 27/291 (9%)

Query: 282 AGLAPFSRHFASTGNVVESVSRILRQWKWGPLAEEALGNTNYSMDAYQANQVLKQLQDHT 341
           A +    R     G + E +    R +K G L  +A+      MDA+  N         T
Sbjct: 424 ATITTLMRVTVMEGRLKEGLFLFFRMFKMG-LEPDAVAFCTL-MDAFCKN------MKPT 475

Query: 342 VALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRL 401
           + L  F+ ++R      D      ++ +L + +     +K  + ++    +P++VTYN +
Sbjct: 476 IGLQLFDLMQRNK-IPADIAVCNVVINLLFKGQSVEEASKFFNNLLEGKMEPDIVTYNTM 534

Query: 402 IHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGL 461
           I  Y     L+EA  +F+ ++     P+ VT   LI    K   +D A+ +      +  
Sbjct: 535 ICGYCSLRRLDEAARIFEMLKFTPFGPNAVTLTILIHTLCKNSDMDGALRIISPSIIS-- 592

Query: 462 SPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALK 521
                 YS+II+ L K G +  A  +F + ++   +P++V Y I+I    K      A  
Sbjct: 593 ------YSIIIDGLCKRGRVDEATNIFHQAIDAKILPDVVAYAILIRGCCKVGRLVEAAL 646

Query: 522 LYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPV 572
           LY  M   G +PD +              L E +     M +  WV D+P+
Sbjct: 647 LYEHMLRNGVKPDDLLQRA----------LSEYKPPKWLMSKGVWVHDKPI 687


>gi|242039015|ref|XP_002466902.1| hypothetical protein SORBIDRAFT_01g016180 [Sorghum bicolor]
 gi|241920756|gb|EER93900.1| hypothetical protein SORBIDRAFT_01g016180 [Sorghum bicolor]
          Length = 653

 Score =  148 bits (374), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 84/293 (28%), Positives = 148/293 (50%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           G K +   Y T++  L  A ++    +LL +M  + C  + VT+N L+  + +   +   
Sbjct: 325 GLKPNVVCYNTVLKGLCSAERWEQAEELLAEMFDNDCPLDDVTFNILVDFFCQNGLVYRV 384

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
           +++ +QM   GC PD +TY T+I+   K G +D A+ + K M A G  P+T +Y++++  
Sbjct: 385 IELLEQMLEHGCVPDVITYTTVINGFCKEGLIDEAVMLLKSMAACGCRPNTISYTIVLKG 444

Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPD 534
           L  A     A  L  +M+ QGC PN VT+N +I    K    + A++L + M   G  PD
Sbjct: 445 LCSAERWVDAEDLMSQMIEQGCSPNPVTFNTVINFLCKKGLVEQAIELLKQMLLNGCSPD 504

Query: 535 KVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYE 594
            ++YS V++ LG  G  DEA  +   M  K   P+  +Y  +     K G + +  + ++
Sbjct: 505 LISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSKEGRINRVIQMFD 564

Query: 595 AMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
            +    +R +    N+++S+  + G    A   L  M++ G  P+  TYT+L+
Sbjct: 565 NIQDVTIRSDAVLYNAVISSLCKRGGTDRAIEFLAYMVSSGCMPNESTYTILI 617



 Score =  140 bits (352), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 93/328 (28%), Positives = 151/328 (46%), Gaps = 4/328 (1%)

Query: 324 SMDAYQANQVLKQLQDH----TVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAI 379
           ++D    N VL  + D       AL     L    G   D  +Y  ++  L  A+++G +
Sbjct: 185 ALDVGNCNLVLNAVCDQGGSVDEALRLLRDLPTSFGCDPDVVSYNAVLKGLCMAKRWGRV 244

Query: 380 NKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDI 439
             L+++MVR GC PNVVT+N LI    R         V  QM   GC PD   Y T++D 
Sbjct: 245 QDLMEEMVRVGCPPNVVTFNTLIGYLCRNGLFERVHQVLAQMVDHGCTPDIRMYATVLDG 304

Query: 440 HAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPN 499
             K G L+VA ++  +M + GL P+   Y+ ++  L  A   + A +L  EM +  C  +
Sbjct: 305 VCKEGHLEVAHEILDRMPSYGLKPNVVCYNTVLKGLCSAERWEQAEELLAEMFDNDCPLD 364

Query: 500 LVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFA 559
            VT+NI++    +       ++L   M   G  PD +TY+ V+      G +DEA  +  
Sbjct: 365 DVTFNILVDFFCQNGLVYRVIELLEQMLEHGCVPDVITYTTVINGFCKEGLIDEAVMLLK 424

Query: 560 EMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVG 619
            M      P+   Y +++     A     A +    M++ G  PN  T N++++   + G
Sbjct: 425 SMAACGCRPNTISYTIVLKGLCSAERWVDAEDLMSQMIEQGCSPNPVTFNTVINFLCKKG 484

Query: 620 QLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
            +  A  LL+ ML  G  P L +Y+ ++
Sbjct: 485 LVEQAIELLKQMLLNGCSPDLISYSTVI 512



 Score =  129 bits (325), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 82/320 (25%), Positives = 145/320 (45%), Gaps = 14/320 (4%)

Query: 329 QANQVLKQLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVR 388
           + +QVL Q+ DH              G   D   Y T++  + +       +++LD+M  
Sbjct: 278 RVHQVLAQMVDH--------------GCTPDIRMYATVLDGVCKEGHLEVAHEILDRMPS 323

Query: 389 DGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDV 448
            G +PNVV YN ++     A    +A ++  +M    C  D VT+  L+D   + G +  
Sbjct: 324 YGLKPNVVCYNTVLKGLCSAERWEQAEELLAEMFDNDCPLDDVTFNILVDFFCQNGLVYR 383

Query: 449 AMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIA 508
            +++ ++M   G  PD  TY+ +IN   K G +  A  L   M   GC PN ++Y I++ 
Sbjct: 384 VIELLEQMLEHGCVPDVITYTTVINGFCKEGLIDEAVMLLKSMAACGCRPNTISYTIVLK 443

Query: 509 LQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVP 568
               A  +  A  L   M   G  P+ VT++ V+  L   G +++A  +  +M      P
Sbjct: 444 GLCSAERWVDAEDLMSQMIEQGCSPNPVTFNTVINFLCKKGLVEQAIELLKQMLLNGCSP 503

Query: 569 DEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLL 628
           D   Y  ++D  GKAG   +A E    M+  G+ PN    +S+ SA  + G+++    + 
Sbjct: 504 DLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSKEGRINRVIQMF 563

Query: 629 QGMLNLGLKPSLQTYTLLLS 648
             + ++ ++     Y  ++S
Sbjct: 564 DNIQDVTIRSDAVLYNAVIS 583



 Score =  127 bits (318), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 79/307 (25%), Positives = 145/307 (47%), Gaps = 14/307 (4%)

Query: 329 QANQVLKQLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVR 388
           QA ++L ++ D+   L              D+ T+  +V    +      + +LL+QM+ 
Sbjct: 348 QAEELLAEMFDNDCPL--------------DDVTFNILVDFFCQNGLVYRVIELLEQMLE 393

Query: 389 DGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDV 448
            GC P+V+TY  +I+ + +   ++EA+ + K M   GC P+ ++Y  ++     A     
Sbjct: 394 HGCVPDVITYTTVINGFCKEGLIDEAVMLLKSMAACGCRPNTISYTIVLKGLCSAERWVD 453

Query: 449 AMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIA 508
           A D+  +M   G SP+  T++ +IN L K G ++ A +L  +M+  GC P+L++Y+ +I 
Sbjct: 454 AEDLMSQMIEQGCSPNPVTFNTVINFLCKKGLVEQAIELLKQMLLNGCSPDLISYSTVID 513

Query: 509 LQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVP 568
              KA     AL+L   M N G  P+ + YS +   L   G ++    +F  ++      
Sbjct: 514 GLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSKEGRINRVIQMFDNIQDVTIRS 573

Query: 569 DEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLL 628
           D  +Y  ++    K G   +A E+   M+ +G  PN  T   L+      G + +A  +L
Sbjct: 574 DAVLYNAVISSLCKRGGTDRAIEFLAYMVSSGCMPNESTYTILIRGLASEGFVKEAQEML 633

Query: 629 QGMLNLG 635
             + + G
Sbjct: 634 TELCSKG 640



 Score =  124 bits (312), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 77/274 (28%), Positives = 129/274 (47%), Gaps = 14/274 (5%)

Query: 327 AYQANQVLKQLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQM 386
            Y+  ++L+Q+ +H              G   D  TYTT++    +         LL  M
Sbjct: 381 VYRVIELLEQMLEH--------------GCVPDVITYTTVINGFCKEGLIDEAVMLLKSM 426

Query: 387 VRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFL 446
              GC+PN ++Y  ++     A    +A D+  QM   GC P+ VT+ T+I+   K G +
Sbjct: 427 AACGCRPNTISYTIVLKGLCSAERWVDAEDLMSQMIEQGCSPNPVTFNTVINFLCKKGLV 486

Query: 447 DVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIM 506
           + A+++ K+M   G SPD  +YS +I+ LGKAG    A +L   MVN+G  PN + Y+ +
Sbjct: 487 EQAIELLKQMLLNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSI 546

Query: 507 IALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNW 566
            +  +K       ++++ ++Q+     D V Y+ V+  L   G  D A    A M     
Sbjct: 547 ASALSKEGRINRVIQMFDNIQDVTIRSDAVLYNAVISSLCKRGGTDRAIEFLAYMVSSGC 606

Query: 567 VPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAG 600
           +P+E  Y +L+      G V++A E    +   G
Sbjct: 607 MPNESTYTILIRGLASEGFVKEAQEMLTELCSKG 640



 Score =  119 bits (299), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 73/279 (26%), Positives = 137/279 (49%), Gaps = 6/279 (2%)

Query: 375 QFGAINKLLDQMVRD-----GCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPD 429
           Q G++++ L +++RD     GC P+VV+YN ++     A       D+ ++M  VGC P+
Sbjct: 201 QGGSVDEAL-RLLRDLPTSFGCDPDVVSYNAVLKGLCMAKRWGRVQDLMEEMVRVGCPPN 259

Query: 430 RVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFC 489
            VT+ TLI    + G  +    +  +M   G +PD   Y+ +++ + K GHL+ AH++  
Sbjct: 260 VVTFNTLIGYLCRNGLFERVHQVLAQMVDHGCTPDIRMYATVLDGVCKEGHLEVAHEILD 319

Query: 490 EMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCG 549
            M + G  PN+V YN ++     A  ++ A +L  +M +     D VT++I+++     G
Sbjct: 320 RMPSYGLKPNVVCYNTVLKGLCSAERWEQAEELLAEMFDNDCPLDDVTFNILVDFFCQNG 379

Query: 550 YLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCN 609
            +     +  +M     VPD   Y  +++ + K G + +A    ++M   G RPN  +  
Sbjct: 380 LVYRVIELLEQMLEHGCVPDVITYTTVINGFCKEGLIDEAVMLLKSMAACGCRPNTISYT 439

Query: 610 SLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
            +L       +  DA  L+  M+  G  P+  T+  +++
Sbjct: 440 IVLKGLCSAERWVDAEDLMSQMIEQGCSPNPVTFNTVIN 478



 Score =  114 bits (285), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 89/373 (23%), Positives = 168/373 (45%), Gaps = 37/373 (9%)

Query: 376 FGAINKLLDQMVRDGCQPNVVTYNRLIHSY-GRANYLNEALDVFKQMQV-VGCEPDRVTY 433
           F +  ++L  +   GC  +V   N ++++   +   ++EAL + + +    GC+PD V+Y
Sbjct: 169 FRSAVRVLQDLHGRGCALDVGNCNLVLNAVCDQGGSVDEALRLLRDLPTSFGCDPDVVSY 228

Query: 434 CTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVN 493
             ++     A       D+ ++M   G  P+  T++ +I  L + G  +  HQ+  +MV+
Sbjct: 229 NAVLKGLCMAKRWGRVQDLMEEMVRVGCPPNVVTFNTLIGYLCRNGLFERVHQVLAQMVD 288

Query: 494 QGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDE 553
            GC P++  Y  ++    K  + + A ++   M + G +P+ V Y+ V++ L      ++
Sbjct: 289 HGCTPDIRMYATVLDGVCKEGHLEVAHEILDRMPSYGLKPNVVCYNTVLKGLCSAERWEQ 348

Query: 554 AEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLS 613
           AE + AEM   +   D+  + +LVD + + G V +  E  E ML+ G  P+V T  ++++
Sbjct: 349 AEELLAEMFDNDCPLDDVTFNILVDFFCQNGLVYRVIELLEQMLEHGCVPDVITYTTVIN 408

Query: 614 AFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGFCHELMAVSGHPA 673
            F + G + +A  LL+ M   G +P+  +YT++L     A    D     +LM+      
Sbjct: 409 GFCKEGLIDEAVMLLKSMAACGCRPNTISYTIVLKGLCSAERWVDA---EDLMS------ 459

Query: 674 HMFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRESKRGLVDAVVDFLHKSGLKEEAGSVW 733
              +    SP P   N                          V++FL K GL E+A  + 
Sbjct: 460 -QMIEQGCSPNPVTFN-------------------------TVINFLCKKGLVEQAIELL 493

Query: 734 EVAAQKNVYPDAV 746
           +        PD +
Sbjct: 494 KQMLLNGCSPDLI 506



 Score = 94.0 bits (232), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 85/360 (23%), Positives = 145/360 (40%), Gaps = 78/360 (21%)

Query: 363 YTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQ 422
           Y  MV    RA Q  +  +L   +      PN  TY  ++ +      + +AL V  +M+
Sbjct: 86  YNAMVSGYCRAGQLASARRLAASV---PVPPNAYTYFPVVRALCARGRIADALSVLDEMR 142

Query: 423 VVGCEPDRVTY-------CT-------------LIDIHAKAGFLDV-------------- 448
             GC P    Y       C+             L D+H +   LDV              
Sbjct: 143 RRGCAPIPPMYHVILEAACSRGGGGGFRSAVRVLQDLHGRGCALDVGNCNLVLNAVCDQG 202

Query: 449 -----AMDMYKKMQAA-GLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVT 502
                A+ + + +  + G  PD  +Y+ ++  L  A        L  EMV  GC PN+VT
Sbjct: 203 GSVDEALRLLRDLPTSFGCDPDVVSYNAVLKGLCMAKRWGRVQDLMEEMVRVGCPPNVVT 262

Query: 503 YNIMIALQAK----------------------ARNYQSAL-------------KLYRDMQ 527
           +N +I    +                       R Y + L             ++   M 
Sbjct: 263 FNTLIGYLCRNGLFERVHQVLAQMVDHGCTPDIRMYATVLDGVCKEGHLEVAHEILDRMP 322

Query: 528 NAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVR 587
           + G +P+ V Y+ V++ L      ++AE + AEM   +   D+  + +LVD + + G V 
Sbjct: 323 SYGLKPNVVCYNTVLKGLCSAERWEQAEELLAEMFDNDCPLDDVTFNILVDFFCQNGLVY 382

Query: 588 KAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
           +  E  E ML+ G  P+V T  ++++ F + G + +A  LL+ M   G +P+  +YT++L
Sbjct: 383 RVIELLEQMLEHGCVPDVITYTTVINGFCKEGLIDEAVMLLKSMAACGCRPNTISYTIVL 442



 Score = 63.2 bits (152), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 68/305 (22%), Positives = 117/305 (38%), Gaps = 37/305 (12%)

Query: 463 PDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMI---ALQAKARNYQSA 519
           P+ +TY  ++  L   G +  A  +  EM  +GC P    Y++++     +     ++SA
Sbjct: 113 PNAYTYFPVVRALCARGRIADALSVLDEMRRRGCAPIPPMYHVILEAACSRGGGGGFRSA 172

Query: 520 LKLYRDMQNAGFEPDKVTYSIVME-VLGHCGYLDEAEAVFAEMRRK-NWVPDEPVYGLLV 577
           +++ +D+   G   D    ++V+  V    G +DEA  +  ++       PD   Y  ++
Sbjct: 173 VRVLQDLHGRGCALDVGNCNLVLNAVCDQGGSVDEALRLLRDLPTSFGCDPDVVSYNAVL 232

Query: 578 DLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLK 637
                A    +  +  E M++ G  PNV T N+L+    R G     + +L  M++ G  
Sbjct: 233 KGLCMAKRWGRVQDLMEEMVRVGCPPNVVTFNTLIGYLCRNGLFERVHQVLAQMVDHGCT 292

Query: 638 PSLQTYTLLLSCCTEARSPYDMGFCHELMAVSGH--PAHMFLLSMPSPGPDGQNVR---- 691
           P ++ Y  +L            G C E     GH   AH  L  MPS G     V     
Sbjct: 293 PDIRMYATVLD-----------GVCKE-----GHLEVAHEILDRMPSYGLKPNVVCYNTV 336

Query: 692 ----------DHVGSFLEMMHSEDRESKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNV 741
                     +     L  M   D        + +VDF  ++GL      + E   +   
Sbjct: 337 LKGLCSAERWEQAEELLAEMFDNDCPLDDVTFNILVDFFCQNGLVYRVIELLEQMLEHGC 396

Query: 742 YPDAV 746
            PD +
Sbjct: 397 VPDVI 401


>gi|449463822|ref|XP_004149630.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g49730-like [Cucumis sativus]
          Length = 641

 Score =  148 bits (374), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 101/389 (25%), Positives = 174/389 (44%), Gaps = 41/389 (10%)

Query: 298 VESVSRILRQWKWG-PLAEEALGNTNYSMDAYQANQVLKQLQDH-TVALGFFNWLRRQAG 355
           VE V RILR++    P  E AL  +   M +    +VL +  D   +   FF W  +Q G
Sbjct: 77  VEKVYRILRKFHTRVPKLELALQESGVIMRSGLPERVLSRCGDAGNLGYRFFVWASKQPG 136

Query: 356 FKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVT---YNRLIHSYGRANYLN 412
           ++H    Y  M+  LG+ RQFGA+  L+++M ++   P ++T   +  L+  +     + 
Sbjct: 137 YRHSYEVYKAMIKTLGKMRQFGAVWALIEEMRKE--NPYMLTPEVFIVLMRRFASVRMVK 194

Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQA-------------- 458
           +A++V  +M   GCEPD   +  L+D   K G +  A  +++ M+               
Sbjct: 195 KAVEVLDEMPKYGCEPDEYVFGCLLDALCKNGSVKEAASLFEDMRVRFNPNLRHFTSLLY 254

Query: 459 --------------------AGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIP 498
                               AG  PD   Y+ ++    +AG ++ A  L  EM    C P
Sbjct: 255 GWCREGKIMEAKHVLVQIKEAGFEPDIVVYNNLLGGYAQAGKMRDAFDLLAEMKKVNCGP 314

Query: 499 NLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVF 558
           N  ++ I+I    K      A++++ +MQ +G E D VTY+ ++      G  D+A  + 
Sbjct: 315 NAASFTILIQSFCKTEKMDEAMRIFTEMQGSGCEADVVTYTTLISGFCKWGNTDKAYEIL 374

Query: 559 AEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRV 618
            +M +K   P +  Y  ++    K   + +  E  E M + G  P++   N+++    ++
Sbjct: 375 DDMIQKGHDPSQLSYLCIMMAHEKKEELEECMELIEEMRKIGCVPDLNIYNTMIRLVCKL 434

Query: 619 GQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
           G L +A  L   M   GL P L TY L++
Sbjct: 435 GDLKEAVRLWGEMQAGGLNPGLDTYILMV 463



 Score =  131 bits (329), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 110/409 (26%), Positives = 170/409 (41%), Gaps = 33/409 (8%)

Query: 269 ERFSKPSREMKIPAGLAPFSRHFASTGNVVESVSRILRQWKWGPLAEEALGNTNYSMDAY 328
           E   K +  M  P       R FAS   V ++V  +    K+G   +E +      +DA 
Sbjct: 165 EEMRKENPYMLTPEVFIVLMRRFASVRMVKKAVEVLDEMPKYGCEPDEYVFGC--LLDAL 222

Query: 329 QANQVLKQ----LQDHTVALG---------FFNWLR--------------RQAGFKHDEH 361
             N  +K+     +D  V             + W R              ++AGF+ D  
Sbjct: 223 CKNGSVKEAASLFEDMRVRFNPNLRHFTSLLYGWCREGKIMEAKHVLVQIKEAGFEPDIV 282

Query: 362 TYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQM 421
            Y  ++G   +A +      LL +M +  C PN  ++  LI S+ +   ++EA+ +F +M
Sbjct: 283 VYNNLLGGYAQAGKMRDAFDLLAEMKKVNCGPNAASFTILIQSFCKTEKMDEAMRIFTEM 342

Query: 422 QVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHL 481
           Q  GCE D VTY TLI    K G  D A ++   M   G  P   +Y  I+    K   L
Sbjct: 343 QGSGCEADVVTYTTLISGFCKWGNTDKAYEILDDMIQKGHDPSQLSYLCIMMAHEKKEEL 402

Query: 482 QAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIV 541
           +   +L  EM   GC+P+L  YN MI L  K  + + A++L+ +MQ  G  P   TY ++
Sbjct: 403 EECMELIEEMRKIGCVPDLNIYNTMIRLVCKLGDLKEAVRLWGEMQAGGLNPGLDTYILM 462

Query: 542 MEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWG---KAGNVRKAWEWYEAMLQ 598
           +      G L EA   F EM  +  +   P YG L +L     +A  +  A   +  M  
Sbjct: 463 VHGFLSQGCLVEACDYFKEMVERGLL-SAPQYGTLKELTNALLRAEKLEMAKNMWSCMTT 521

Query: 599 AGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
            G   NV      + A    G + +A      M++  L P   T+  L+
Sbjct: 522 KGCELNVSAWTIWIHALFSNGHVKEACSYCLDMMDADLMPQPDTFAKLM 570



 Score = 72.4 bits (176), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 53/229 (23%), Positives = 100/229 (43%), Gaps = 37/229 (16%)

Query: 354 AGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNE 413
           +G + D  TYTT++    +        ++LD M++ G  P+ ++Y  ++ ++ +   L E
Sbjct: 345 SGCEADVVTYTTLISGFCKWGNTDKAYEILDDMIQKGHDPSQLSYLCIMMAHEKKEELEE 404

Query: 414 ALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII- 472
            +++ ++M+ +GC PD   Y T+I +  K G L  A+ ++ +MQA GL+P   TY +++ 
Sbjct: 405 CMELIEEMRKIGCVPDLNIYNTMIRLVCKLGDLKEAVRLWGEMQAGGLNPGLDTYILMVH 464

Query: 473 ------------------------------------NCLGKAGHLQAAHQLFCEMVNQGC 496
                                               N L +A  L+ A  ++  M  +GC
Sbjct: 465 GFLSQGCLVEACDYFKEMVERGLLSAPQYGTLKELTNALLRAEKLEMAKNMWSCMTTKGC 524

Query: 497 IPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVL 545
             N+  + I I       + + A     DM +A   P   T++ +M  L
Sbjct: 525 ELNVSAWTIWIHALFSNGHVKEACSYCLDMMDADLMPQPDTFAKLMRGL 573



 Score = 64.3 bits (155), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 43/188 (22%), Positives = 88/188 (46%), Gaps = 3/188 (1%)

Query: 461 LSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSAL 520
           L+P+ F   V++        ++ A ++  EM   GC P+   +  ++    K  + + A 
Sbjct: 175 LTPEVFI--VLMRRFASVRMVKKAVEVLDEMPKYGCEPDEYVFGCLLDALCKNGSVKEAA 232

Query: 521 KLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLW 580
            L+ DM+   F P+   ++ ++      G + EA+ V  +++   + PD  VY  L+  +
Sbjct: 233 SLFEDMR-VRFNPNLRHFTSLLYGWCREGKIMEAKHVLVQIKEAGFEPDIVVYNNLLGGY 291

Query: 581 GKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSL 640
            +AG +R A++    M +    PN  +   L+ +F +  ++ +A  +   M   G +  +
Sbjct: 292 AQAGKMRDAFDLLAEMKKVNCGPNAASFTILIQSFCKTEKMDEAMRIFTEMQGSGCEADV 351

Query: 641 QTYTLLLS 648
            TYT L+S
Sbjct: 352 VTYTTLIS 359



 Score = 60.1 bits (144), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 62/235 (26%), Positives = 104/235 (44%), Gaps = 18/235 (7%)

Query: 432 TYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEM 491
            Y  L   H +   L++A+     +  +GL P+     V+  C G AG+L   ++ F   
Sbjct: 80  VYRILRKFHTRVPKLELALQESGVIMRSGL-PE----RVLSRC-GDAGNL--GYRFFVWA 131

Query: 492 VNQ-GCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVT---YSIVMEVLGH 547
             Q G   +   Y  MI    K R + +   L  +M+     P  +T   + ++M     
Sbjct: 132 SKQPGYRHSYEVYKAMIKTLGKMRQFGAVWALIEEMRKEN--PYMLTPEVFIVLMRRFAS 189

Query: 548 CGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPT 607
              + +A  V  EM +    PDE V+G L+D   K G+V++A   +E M +    PN+  
Sbjct: 190 VRMVKKAVEVLDEMPKYGCEPDEYVFGCLLDALCKNGSVKEAASLFEDM-RVRFNPNLRH 248

Query: 608 CNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEA---RSPYDM 659
             SLL  + R G++ +A H+L  +   G +P +  Y  LL    +A   R  +D+
Sbjct: 249 FTSLLYGWCREGKIMEAKHVLVQIKEAGFEPDIVVYNNLLGGYAQAGKMRDAFDL 303


>gi|302794005|ref|XP_002978767.1| hypothetical protein SELMODRAFT_109632 [Selaginella moellendorffii]
 gi|300153576|gb|EFJ20214.1| hypothetical protein SELMODRAFT_109632 [Selaginella moellendorffii]
          Length = 521

 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 78/286 (27%), Positives = 147/286 (51%), Gaps = 3/286 (1%)

Query: 365 TMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVV 424
           T + +L  A+++     L   + +  C+PN+ TYNR+I  YG+A   ++A  +++ M+  
Sbjct: 179 TFLHVLEDAKEYRRAEALFRDLEKYECEPNIDTYNRMIVIYGKAGEPSKAEMLYRSMRRA 238

Query: 425 GCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAA 484
            C P+  T+  L++  A+ G    A   + K+Q     PD + Y+ ++    + G    A
Sbjct: 239 MCPPNICTFTALMNAFARQGLYREAERYFDKLQEFDYKPDHYAYNALMEAYSQGGSPAGA 298

Query: 485 HQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEV 544
            ++F  M   GC P+ V++NI+I    +A  Y+ A K+++ MQ+AGF P+  +  +++  
Sbjct: 299 LEIFQTMQRNGCFPDTVSHNILINAYGRAGLYEDAEKIFKSMQSAGFSPNLKSNMLLLSA 358

Query: 545 LGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAG---L 601
               G ++EAE + + M R    PD  +Y  L++ +G +G           M+++     
Sbjct: 359 YARAGRVEEAEELVSAMERDGTKPDTLIYNALINAYGVSGRHEDMEALLAKMVKSSSKQT 418

Query: 602 RPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
           +P++ T N+L+  + + G +  A  L QG+  L L P   T+T L+
Sbjct: 419 KPDIGTYNTLIQVYAQAGFIPKAEELFQGLARLKLVPDATTWTALM 464



 Score =  140 bits (353), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 112/427 (26%), Positives = 192/427 (44%), Gaps = 18/427 (4%)

Query: 392 QPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMD 451
           +P++  YN LI +YG++  + +A   F +MQ   C P+  T+  LI+ +  AG  + A +
Sbjct: 101 RPDLGCYNLLIDAYGKSLNIEDAEKTFNRMQEALCVPNEETFGVLINGYRLAGSFEKAEE 160

Query: 452 MYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQA 511
           ++ +MQ  G SP     +  ++ L  A   + A  LF ++    C PN+ TYN MI +  
Sbjct: 161 LFVQMQKRGYSPGPLACNTFLHVLEDAKEYRRAEALFRDLEKYECEPNIDTYNRMIVIYG 220

Query: 512 KARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEP 571
           KA     A  LYR M+ A   P+  T++ +M      G   EAE  F +++  ++ PD  
Sbjct: 221 KAGEPSKAEMLYRSMRRAMCPPNICTFTALMNAFARQGLYREAERYFDKLQEFDYKPDHY 280

Query: 572 VYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGM 631
            Y  L++ + + G+   A E ++ M + G  P+  + N L++A+ R G   DA  + + M
Sbjct: 281 AYNALMEAYSQGGSPAGALEIFQTMQRNGCFPDTVSHNILINAYGRAGLYEDAEKIFKSM 340

Query: 632 LNLGLKPSLQTYTLLLSCCTEARSPYDMGFCHELMAVSGHPAHMFLLS--MPSPGPDGQN 689
            + G  P+L++  LLLS    A    +       M   G      + +  + + G  G++
Sbjct: 341 QSAGFSPNLKSNMLLLSAYARAGRVEEAEELVSAMERDGTKPDTLIYNALINAYGVSGRH 400

Query: 690 VRDHVGSFLEMMHSEDRESKR--GLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAVK 747
             D      +M+ S  +++K   G  + ++    ++G   +A  +++  A+  + PDA  
Sbjct: 401 -EDMEALLAKMVKSSSKQTKPDIGTYNTLIQVYAQAGFIPKAEELFQGLARLKLVPDATT 459

Query: 748 EKGMSYWLINLHVMSDGTAVIALSRTLAWFRKQMLISGVGPSRIDIVTGWGRRSRVTGTS 807
                 W      +  G A   L R      K+ML SG    R D VT     S      
Sbjct: 460 ------WT----ALMGGYAKKKLYRKCTSILKKMLESGC---RADAVTARVLFSACRSPE 506

Query: 808 LVRQAVQ 814
            V Q  Q
Sbjct: 507 QVEQVTQ 513



 Score =  118 bits (296), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 69/273 (25%), Positives = 133/273 (48%), Gaps = 3/273 (1%)

Query: 362 TYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQM 421
           T+T ++    R   +    +  D++     +P+   YN L+ +Y +      AL++F+ M
Sbjct: 246 TFTALMNAFARQGLYREAERYFDKLQEFDYKPDHYAYNALMEAYSQGGSPAGALEIFQTM 305

Query: 422 QVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHL 481
           Q  GC PD V++  LI+ + +AG  + A  ++K MQ+AG SP+  +  ++++   +AG +
Sbjct: 306 QRNGCFPDTVSHNILINAYGRAGLYEDAEKIFKSMQSAGFSPNLKSNMLLLSAYARAGRV 365

Query: 482 QAAHQLFCEMVNQGCIPNLVTYNIMI---ALQAKARNYQSALKLYRDMQNAGFEPDKVTY 538
           + A +L   M   G  P+ + YN +I    +  +  + ++ L       +   +PD  TY
Sbjct: 366 EEAEELVSAMERDGTKPDTLIYNALINAYGVSGRHEDMEALLAKMVKSSSKQTKPDIGTY 425

Query: 539 SIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQ 598
           + +++V    G++ +AE +F  + R   VPD   +  L+  + K    RK     + ML+
Sbjct: 426 NTLIQVYAQAGFIPKAEELFQGLARLKLVPDATTWTALMGGYAKKKLYRKCTSILKKMLE 485

Query: 599 AGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGM 631
           +G R +  T   L SA     Q+     L++ +
Sbjct: 486 SGCRADAVTARVLFSACRSPEQVEQVTQLMESL 518



 Score = 95.5 bits (236), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 54/201 (26%), Positives = 97/201 (48%)

Query: 456 MQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARN 515
           +Q     PD   Y+++I+  GK+ +++ A + F  M    C+PN  T+ ++I     A +
Sbjct: 95  LQGTAFRPDLGCYNLLIDAYGKSLNIEDAEKTFNRMQEALCVPNEETFGVLINGYRLAGS 154

Query: 516 YQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGL 575
           ++ A +L+  MQ  G+ P  +  +  + VL        AEA+F ++ +    P+   Y  
Sbjct: 155 FEKAEELFVQMQKRGYSPGPLACNTFLHVLEDAKEYRRAEALFRDLEKYECEPNIDTYNR 214

Query: 576 LVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLG 635
           ++ ++GKAG   KA   Y +M +A   PN+ T  +L++AF R G   +A      +    
Sbjct: 215 MIVIYGKAGEPSKAEMLYRSMRRAMCPPNICTFTALMNAFARQGLYREAERYFDKLQEFD 274

Query: 636 LKPSLQTYTLLLSCCTEARSP 656
            KP    Y  L+   ++  SP
Sbjct: 275 YKPDHYAYNALMEAYSQGGSP 295



 Score = 70.1 bits (170), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 43/179 (24%), Positives = 83/179 (46%), Gaps = 3/179 (1%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYG---RA 408
           + AGF  +  +   ++    RA +     +L+  M RDG +P+ + YN LI++YG   R 
Sbjct: 341 QSAGFSPNLKSNMLLLSAYARAGRVEEAEELVSAMERDGTKPDTLIYNALINAYGVSGRH 400

Query: 409 NYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTY 468
             +   L    +      +PD  TY TLI ++A+AGF+  A ++++ +    L PD  T+
Sbjct: 401 EDMEALLAKMVKSSSKQTKPDIGTYNTLIQVYAQAGFIPKAEELFQGLARLKLVPDATTW 460

Query: 469 SVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQ 527
           + ++    K    +    +  +M+  GC  + VT  ++ +        +   +L   +Q
Sbjct: 461 TALMGGYAKKKLYRKCTSILKKMLESGCRADAVTARVLFSACRSPEQVEQVTQLMESLQ 519


>gi|296086456|emb|CBI32045.3| unnamed protein product [Vitis vinifera]
          Length = 648

 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 90/316 (28%), Positives = 153/316 (48%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           G   D   YTT++    +     +  +L D+M +    P+ +TY  +I    +   + EA
Sbjct: 253 GIAPDGVIYTTLIDGFCKLGNVSSAYRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEA 312

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
             +F +M     EPD VTY  LID + K G +  A  ++ +M   GL+P+  TY+ + + 
Sbjct: 313 DKLFHEMVCKRLEPDEVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADG 372

Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPD 534
           L K G +  A++L  EM  +G   N+ TYN ++    KA N   A+KL +DM+ AGF PD
Sbjct: 373 LCKCGEVDTANELLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPD 432

Query: 535 KVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYE 594
            VTY+ +M+       +  A  +  +M  +   P    + +L++ +  +G +    +  +
Sbjct: 433 AVTYTTLMDAYCKSREMVRAHELLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLK 492

Query: 595 AMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEAR 654
            ML+ G+ PN  T NSL+  +     +     + +GM   G+ P   TY +L+    +AR
Sbjct: 493 WMLEKGIMPNATTYNSLIKQYCIRNNMRATTEIYRGMCAKGVVPDGNTYNILIKGHCKAR 552

Query: 655 SPYDMGFCHELMAVSG 670
           +  +  F H  M   G
Sbjct: 553 NMKEAWFLHRDMVGKG 568



 Score =  146 bits (368), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 95/299 (31%), Positives = 150/299 (50%), Gaps = 11/299 (3%)

Query: 381 KLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIH 440
           KL+++M   G +PN  TYN +I    +   + EA  V ++M   G  PD V Y TLID  
Sbjct: 209 KLIEEMQIKGLKPNPYTYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTLIDGF 268

Query: 441 AKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNL 500
            K G +  A  ++ +MQ   +SPD  TY+ +I  L + G +  A +LF EMV +   P+ 
Sbjct: 269 CKLGNVSSAYRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPDE 328

Query: 501 VTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAE 560
           VTY  +I    K    + A  L+  M   G  P+ VTY+ + + L  CG +D A  +  E
Sbjct: 329 VTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHE 388

Query: 561 MRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQ 620
           M RK    +   Y  LV+   KAGN+ +A +  + M  AG  P+  T  +L+ A+ +  +
Sbjct: 389 MCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSRE 448

Query: 621 LSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGFCHELMAVSGHPAHMFLLS 679
           +  A+ LL+ ML+  L+P++ T+ +L++           GFC   M   G     ++L 
Sbjct: 449 MVRAHELLRQMLDRELQPTVVTFNVLMN-----------GFCMSGMLEDGEKLLKWMLE 496



 Score =  136 bits (342), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 84/294 (28%), Positives = 143/294 (48%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           G K + +TY  ++ +L +  +     ++L +M+ +G  P+ V Y  LI  + +   ++ A
Sbjct: 218 GLKPNPYTYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTLIDGFCKLGNVSSA 277

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
             +F +MQ     PD +TY  +I    + G +  A  ++ +M    L PD  TY+ +I+ 
Sbjct: 278 YRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPDEVTYTALIDG 337

Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPD 534
             K G ++ A  L  +M+  G  PN+VTY  +     K     +A +L  +M   G E +
Sbjct: 338 YCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHEMCRKGLELN 397

Query: 535 KVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYE 594
             TY+ ++  L   G +D+A  +  +M    + PD   Y  L+D + K+  + +A E   
Sbjct: 398 IYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVRAHELLR 457

Query: 595 AMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
            ML   L+P V T N L++ F   G L D   LL+ ML  G+ P+  TY  L+ 
Sbjct: 458 QMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNATTYNSLIK 511



 Score =  132 bits (332), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 96/358 (26%), Positives = 170/358 (47%), Gaps = 9/358 (2%)

Query: 291 FASTGNVVESVSRILRQWKWGPLAEEALGNTNYSMDAYQANQVLKQLQDHTVALGFFNWL 350
              TG V E+  R+LR+     +A + +  T   +D +       +L + + A   F+ +
Sbjct: 233 LCKTGKVAEA-ERVLREMISEGIAPDGVIYTTL-IDGFC------KLGNVSSAYRLFDEM 284

Query: 351 RRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANY 410
           +++     D  TYT ++  L +  +    +KL  +MV    +P+ VTY  LI  Y +   
Sbjct: 285 QKRK-ISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPDEVTYTALIDGYCKEGK 343

Query: 411 LNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSV 470
           + EA  +  QM  +G  P+ VTY  L D   K G +D A ++  +M   GL  + +TY+ 
Sbjct: 344 MKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHEMCRKGLELNIYTYNS 403

Query: 471 IINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAG 530
           ++N L KAG++  A +L  +M   G  P+ VTY  ++    K+R    A +L R M +  
Sbjct: 404 LVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVRAHELLRQMLDRE 463

Query: 531 FEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAW 590
            +P  VT++++M      G L++ E +   M  K  +P+   Y  L+  +    N+R   
Sbjct: 464 LQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNATTYNSLIKQYCIRNNMRATT 523

Query: 591 EWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
           E Y  M   G+ P+  T N L+    +   + +A+ L + M+  G   ++ +Y  L+ 
Sbjct: 524 EIYRGMCAKGVVPDGNTYNILIKGHCKARNMKEAWFLHRDMVGKGFNLTVSSYNALIK 581



 Score =  127 bits (318), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 80/294 (27%), Positives = 138/294 (46%), Gaps = 35/294 (11%)

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
           Q G   +  TYT +   L +  +    N+LL +M R G + N+ TYN L++   +A  ++
Sbjct: 356 QMGLTPNIVTYTALADGLCKCGEVDTANELLHEMCRKGLELNIYTYNSLVNGLCKAGNID 415

Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
           +A+ + K M+V G  PD VTY TL+D + K+  +  A ++ ++M    L P   T++V++
Sbjct: 416 QAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVRAHELLRQMLDRELQPTVVTFNVLM 475

Query: 473 NCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFE 532
           N    +G L+   +L   M+ +G +PN  TYN +I       N ++  ++YR M   G  
Sbjct: 476 NGFCMSGMLEDGEKLLKWMLEKGIMPNATTYNSLIKQYCIRNNMRATTEIYRGMCAKGVV 535

Query: 533 PDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEW 592
           PD  TY+I+++  GHC                                 KA N+++AW  
Sbjct: 536 PDGNTYNILIK--GHC---------------------------------KARNMKEAWFL 560

Query: 593 YEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLL 646
           +  M+  G    V + N+L+  F +  +  +A  L + M   GL    + Y + 
Sbjct: 561 HRDMVGKGFNLTVSSYNALIKGFYKRKKFLEARELFEQMRREGLVADREIYNIF 614



 Score =  125 bits (315), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 83/299 (27%), Positives = 144/299 (48%), Gaps = 4/299 (1%)

Query: 449 AMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIA 508
            + + ++MQ  GL P+ +TY+ +I  L K G +  A ++  EM+++G  P+ V Y  +I 
Sbjct: 207 VLKLIEEMQIKGLKPNPYTYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTLID 266

Query: 509 LQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVP 568
              K  N  SA +L+ +MQ     PD +TY+ V+  L   G + EA+ +F EM  K   P
Sbjct: 267 GFCKLGNVSSAYRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEP 326

Query: 569 DEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLL 628
           DE  Y  L+D + K G +++A+  +  MLQ GL PN+ T  +L     + G++  A  LL
Sbjct: 327 DEVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELL 386

Query: 629 QGMLNLGLKPSLQTYTLLLS-CCTEARSPYDMGFCHELMAVSGHP-AHMFLLSMPSPGPD 686
             M   GL+ ++ TY  L++  C        +    ++     HP A  +   M +    
Sbjct: 387 HEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKS 446

Query: 687 GQNVRDHVGSFLEMMHSEDRESKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDA 745
            + VR H    L  M   + +      + +++    SG+ E+   + +   +K + P+A
Sbjct: 447 REMVRAH--ELLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNA 503



 Score =  120 bits (300), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 87/301 (28%), Positives = 149/301 (49%), Gaps = 26/301 (8%)

Query: 381 KLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALD-------------VFKQMQVVGCE 427
           KL D+M+  G   +V + N  I      ++L+E LD             + ++MQ+ G +
Sbjct: 167 KLFDKMLNYGLLISVDSCNLFI------SHLSEDLDGIKIALKGEWVLKLIEEMQIKGLK 220

Query: 428 PDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQL 487
           P+  TY  +I +  K G +  A  + ++M + G++PD   Y+ +I+   K G++ +A++L
Sbjct: 221 PNPYTYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTLIDGFCKLGNVSSAYRL 280

Query: 488 FCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGH 547
           F EM  +   P+ +TY  +I    +      A KL+ +M     EPD+VTY+ +++  G+
Sbjct: 281 FDEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPDEVTYTALID--GY 338

Query: 548 C--GYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNV 605
           C  G + EA ++  +M +    P+   Y  L D   K G V  A E    M + GL  N+
Sbjct: 339 CKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHEMCRKGLELNI 398

Query: 606 PTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGFCHEL 665
            T NSL++   + G +  A  L++ M   G  P   TYT L+    ++R   +M   HEL
Sbjct: 399 YTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSR---EMVRAHEL 455

Query: 666 M 666
           +
Sbjct: 456 L 456



 Score = 90.5 bits (223), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 56/191 (29%), Positives = 99/191 (51%)

Query: 354 AGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNE 413
           AGF  D  TYTT++    ++R+    ++LL QM+    QP VVT+N L++ +  +  L +
Sbjct: 427 AGFHPDAVTYTTLMDAYCKSREMVRAHELLRQMLDRELQPTVVTFNVLMNGFCMSGMLED 486

Query: 414 ALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIIN 473
              + K M   G  P+  TY +LI  +     +    ++Y+ M A G+ PD  TY+++I 
Sbjct: 487 GEKLLKWMLEKGIMPNATTYNSLIKQYCIRNNMRATTEIYRGMCAKGVVPDGNTYNILIK 546

Query: 474 CLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEP 533
              KA +++ A  L  +MV +G    + +YN +I    K + +  A +L+  M+  G   
Sbjct: 547 GHCKARNMKEAWFLHRDMVGKGFNLTVSSYNALIKGFYKRKKFLEARELFEQMRREGLVA 606

Query: 534 DKVTYSIVMEV 544
           D+  Y+I  ++
Sbjct: 607 DREIYNIFADI 617



 Score = 66.2 bits (160), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 57/223 (25%), Positives = 95/223 (42%), Gaps = 23/223 (10%)

Query: 291 FASTGNVVESVSRILRQWKWGPLAEEALGNTNYSMDAY-------QANQVLKQLQDHTVA 343
               GN+ ++V ++++  +      +A+  T   MDAY       +A+++L+Q+ D  + 
Sbjct: 408 LCKAGNIDQAV-KLMKDMEVAGFHPDAVTYTTL-MDAYCKSREMVRAHELLRQMLDRELQ 465

Query: 344 LGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIH 403
                +     GF         M G+L          KLL  M+  G  PN  TYN LI 
Sbjct: 466 PTVVTFNVLMNGF--------CMSGMLEDG------EKLLKWMLEKGIMPNATTYNSLIK 511

Query: 404 SYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSP 463
            Y   N +    ++++ M   G  PD  TY  LI  H KA  +  A  +++ M   G + 
Sbjct: 512 QYCIRNNMRATTEIYRGMCAKGVVPDGNTYNILIKGHCKARNMKEAWFLHRDMVGKGFNL 571

Query: 464 DTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIM 506
              +Y+ +I    K      A +LF +M  +G + +   YNI 
Sbjct: 572 TVSSYNALIKGFYKRKKFLEARELFEQMRREGLVADREIYNIF 614



 Score = 40.4 bits (93), Expect = 4.7,   Method: Compositional matrix adjust.
 Identities = 27/98 (27%), Positives = 45/98 (45%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           G   D +TY  ++    +AR       L   MV  G    V +YN LI  + +     EA
Sbjct: 533 GVVPDGNTYNILIKGHCKARNMKEAWFLHRDMVGKGFNLTVSSYNALIKGFYKRKKFLEA 592

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDM 452
            ++F+QM+  G   DR  Y    DI+   G +++ +++
Sbjct: 593 RELFEQMRREGLVADREIYNIFADINYDEGKMELTLEL 630


>gi|296087921|emb|CBI35204.3| unnamed protein product [Vitis vinifera]
          Length = 543

 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 90/298 (30%), Positives = 155/298 (52%), Gaps = 7/298 (2%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           GF+ D  TY T++  L +     A  +LL  MV+  CQPNV  YN +I S  +   + EA
Sbjct: 128 GFRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEA 187

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLD---VAMDMYKKMQAAGLSPDTFTYSVI 471
            ++F +M   G  PD  TY +L  IHA     +   VA  +  +M  + + PD  +++ +
Sbjct: 188 FNLFSEMVTKGISPDIFTYNSL--IHALCNLCEWKHVA-TLLNEMVDSKIMPDVVSFNTV 244

Query: 472 INCLGKAGHLQAAHQLFCEMVNQ-GCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAG 530
           ++ L K G +  AH +  +M+ + GC+PN+++YN +I    K +    A+ L+ +M    
Sbjct: 245 VDALCKEGKVTEAHDVVDKMIQRGGCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQE 304

Query: 531 FEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAW 590
             PD VTYS ++  L H   L +A A+F EM   + +P+   Y +L+D   K   + +A 
Sbjct: 305 LIPDTVTYSTLIHGLCHVERLQDAIALFHEMVACSQIPNLVTYRILLDYLCKNRYLAEAM 364

Query: 591 EWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
              +A+  + L P++   N  +    R G+L  A  L   + + GL+P + TY+++++
Sbjct: 365 ALLKAIEGSNLDPDIQVNNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVWTYSIMIN 422



 Score =  139 bits (351), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 90/294 (30%), Positives = 149/294 (50%), Gaps = 1/294 (0%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           G   D  TY +++  L    ++  +  LL++MV     P+VV++N ++ +  +   + EA
Sbjct: 198 GISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVVDALCKEGKVTEA 257

Query: 415 LDVFKQM-QVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIIN 473
            DV  +M Q  GC P+ ++Y TLI+ + K   +D AM ++ +M    L PDT TYS +I+
Sbjct: 258 HDVVDKMIQRGGCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIH 317

Query: 474 CLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEP 533
            L     LQ A  LF EMV    IPNLVTY I++    K R    A+ L + ++ +  +P
Sbjct: 318 GLCHVERLQDAIALFHEMVACSQIPNLVTYRILLDYLCKNRYLAEAMALLKAIEGSNLDP 377

Query: 534 DKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWY 593
           D    +I ++ +   G L+ A  +F+ +  K   PD   Y ++++   + G + +A + +
Sbjct: 378 DIQVNNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVWTYSIMINGLCRRGLLDEASKLF 437

Query: 594 EAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
             M + G   N    N++   FLR  + S A  LLQ M+  G      T TL +
Sbjct: 438 REMDENGCTLNGCIYNTITRGFLRNNETSRAIQLLQEMVARGFSADASTMTLFV 491



 Score =  131 bits (329), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 89/300 (29%), Positives = 141/300 (47%), Gaps = 5/300 (1%)

Query: 377 GAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTL 436
           GAI+   ++M+R    P+ V +N+L+ S  +  + +  L +  QM   G  P+  T   L
Sbjct: 44  GAISSF-NRMLRMQPPPSTVDFNKLLTSIAKMKHHSTLLSLSHQMDSFGIPPNIYTLHIL 102

Query: 437 ID--IHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQ 494
           I+   H   G +  A+ ++ KM   G  PD  TY  +IN L K G+  AA +L   MV +
Sbjct: 103 INSFCHLNRGKIGEALHLFDKMIGEGFRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQK 162

Query: 495 GCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEA 554
            C PN+  YN +I    K R    A  L+ +M   G  PD  TY+ ++  L +       
Sbjct: 163 NCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHV 222

Query: 555 EAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQ-AGLRPNVPTCNSLLS 613
             +  EM     +PD   +  +VD   K G V +A +  + M+Q  G  PNV + N+L++
Sbjct: 223 ATLLNEMVDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGGCMPNVISYNTLIN 282

Query: 614 AFLRVGQLSDAYHLLQGMLNLGLKPSLQTY-TLLLSCCTEARSPYDMGFCHELMAVSGHP 672
            + ++ ++  A +L   M    L P   TY TL+   C   R    +   HE++A S  P
Sbjct: 283 GYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALFHEMVACSQIP 342



 Score = 96.7 bits (239), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 65/226 (28%), Positives = 109/226 (48%), Gaps = 2/226 (0%)

Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLI 402
           A+  F  + RQ     D  TY+T++  L    +      L  +MV     PN+VTY  L+
Sbjct: 293 AMYLFGEMCRQELIP-DTVTYSTLIHGLCHVERLQDAIALFHEMVACSQIPNLVTYRILL 351

Query: 403 HSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLS 462
               +  YL EA+ + K ++    +PD       ID   +AG L+ A D++  + + GL 
Sbjct: 352 DYLCKNRYLAEAMALLKAIEGSNLDPDIQVNNIAIDGMCRAGELEAARDLFSNLSSKGLQ 411

Query: 463 PDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKL 522
           PD +TYS++IN L + G L  A +LF EM   GC  N   YN +     +      A++L
Sbjct: 412 PDVWTYSIMINGLCRRGLLDEASKLFREMDENGCTLNGCIYNTITRGFLRNNETSRAIQL 471

Query: 523 YRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEM-RRKNWV 567
            ++M   GF  D  T ++ +++L   G     + +  +  ++K+W+
Sbjct: 472 LQEMVARGFSADASTMTLFVKMLSDDGLDQSLKQILRDFCKQKSWI 517



 Score = 90.1 bits (222), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 59/223 (26%), Positives = 101/223 (45%)

Query: 362 TYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQM 421
           +Y T++    + ++      L  +M R    P+ VTY+ LIH       L +A+ +F +M
Sbjct: 276 SYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALFHEM 335

Query: 422 QVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHL 481
                 P+ VTY  L+D   K  +L  AM + K ++ + L PD    ++ I+ + +AG L
Sbjct: 336 VACSQIPNLVTYRILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQVNNIAIDGMCRAGEL 395

Query: 482 QAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIV 541
           +AA  LF  + ++G  P++ TY+IMI    +      A KL+R+M   G   +   Y+ +
Sbjct: 396 EAARDLFSNLSSKGLQPDVWTYSIMINGLCRRGLLDEASKLFREMDENGCTLNGCIYNTI 455

Query: 542 MEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAG 584
                       A  +  EM  + +  D     L V +    G
Sbjct: 456 TRGFLRNNETSRAIQLLQEMVARGFSADASTMTLFVKMLSDDG 498



 Score = 73.6 bits (179), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 53/212 (25%), Positives = 95/212 (44%), Gaps = 3/212 (1%)

Query: 446 LDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNI 505
           +D A+  + +M      P T  ++ ++  + K  H      L  +M + G  PN+ T +I
Sbjct: 42  IDGAISSFNRMLRMQPPPSTVDFNKLLTSIAKMKHHSTLLSLSHQMDSFGIPPNIYTLHI 101

Query: 506 MI--ALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRR 563
           +I             AL L+  M   GF PD VTY  ++  L   G    A  +   M +
Sbjct: 102 LINSFCHLNRGKIGEALHLFDKMIGEGFRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQ 161

Query: 564 KNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSD 623
           KN  P+   Y  ++D   K   V +A+  +  M+  G+ P++ T NSL+ A   + +   
Sbjct: 162 KNCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKH 221

Query: 624 AYHLLQGMLNLGLKPSLQTY-TLLLSCCTEAR 654
              LL  M++  + P + ++ T++ + C E +
Sbjct: 222 VATLLNEMVDSKIMPDVVSFNTVVDALCKEGK 253


>gi|224127568|ref|XP_002329310.1| predicted protein [Populus trichocarpa]
 gi|222870764|gb|EEF07895.1| predicted protein [Populus trichocarpa]
          Length = 593

 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 89/296 (30%), Positives = 152/296 (51%), Gaps = 2/296 (0%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           R  GF+   H  T ++  L + R    + K+  +MV+ G   N+  YN L+H+  ++  +
Sbjct: 163 RVNGFRPHLHACTVLLNSLAKDRLTDTVWKIYKKMVKLGVVANIHVYNVLLHACCKSGDV 222

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
            +A  V  +M++    PD  TY TLI ++ K G    A+ +  +M+ AG+SPD FTY+ +
Sbjct: 223 EKAEKVLSEMELKCVFPDLFTYNTLISLYCKKGMHYEALSVQDRMEMAGISPDIFTYNSL 282

Query: 472 INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF 531
           I    + G ++ A QLF ++  +   PN VTY  +I    +  +   AL+L   M   G 
Sbjct: 283 IYGFCREGRMREAVQLFRDI--KDVTPNHVTYTSLIDGYCRVNDLDEALRLKEVMSEKGL 340

Query: 532 EPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWE 591
            P  +TY+ ++  L   G L +A  +  EM  +   PD      L++ + K G++R A +
Sbjct: 341 YPTVITYNSILRKLCEGGRLRDANILLNEMSERKIEPDNVTCNTLINAYCKIGDMRSALK 400

Query: 592 WYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
             + M+ AGL+ +  T  +L+  F +  ++  A  LL GM++ G  PS  TY+ L+
Sbjct: 401 VKDKMVGAGLKLDQFTYKALIHGFCKAKEIDKAKELLFGMMDAGFSPSYCTYSWLV 456



 Score =  128 bits (321), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 102/383 (26%), Positives = 171/383 (44%), Gaps = 33/383 (8%)

Query: 282 AGLAPFSRHFASTGNVVESVSRILRQWKWGPLAEEALGNTNYSMDAYQAN--QVLKQL-- 337
           A L P S     T  +++S+   + +  W  L     G+ +Y +    A   QVL  L  
Sbjct: 2   ATLTPISN---ETQLLIQSICASVIKGSWKNLLRPKFGSNDYHLITTTATVRQVLLHLSL 58

Query: 338 --QDHTVALGFFNWLRRQA-GFKHDEHTYTTMVGILGRARQFGAINKLLDQM-------- 386
             Q   ++   F W+      +KH   +  TM+ IL + + F   +  L+ +        
Sbjct: 59  YDQSPCLSWALFKWIESSVPNYKHSLQSSWTMLYILTKHKHFKTAHAFLENIAFKDFLST 118

Query: 387 ---------VRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLI 437
                    + D    N    + L+  YG +   +EA+ VF+ M+V G  P       L+
Sbjct: 119 QSVLSSLVKIHDDPDVNSHVLSWLVIVYGNSKMTHEAIQVFEHMRVNGFRPHLHACTVLL 178

Query: 438 DIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCI 497
           +  AK    D    +YKKM   G+  +   Y+V+++   K+G ++ A ++  EM  +   
Sbjct: 179 NSLAKDRLTDTVWKIYKKMVKLGVVANIHVYNVLLHACCKSGDVEKAEKVLSEMELKCVF 238

Query: 498 PNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHC--GYLDEAE 555
           P+L TYN +I+L  K   +  AL +   M+ AG  PD  TY+ +  + G C  G + EA 
Sbjct: 239 PDLFTYNTLISLYCKKGMHYEALSVQDRMEMAGISPDIFTYNSL--IYGFCREGRMREAV 296

Query: 556 AVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAF 615
            +F ++  K+  P+   Y  L+D + +  ++ +A    E M + GL P V T NS+L   
Sbjct: 297 QLFRDI--KDVTPNHVTYTSLIDGYCRVNDLDEALRLKEVMSEKGLYPTVITYNSILRKL 354

Query: 616 LRVGQLSDAYHLLQGMLNLGLKP 638
              G+L DA  LL  M    ++P
Sbjct: 355 CEGGRLRDANILLNEMSERKIEP 377



 Score =  114 bits (286), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 80/288 (27%), Positives = 139/288 (48%), Gaps = 2/288 (0%)

Query: 359 DEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVF 418
           D  TY T++ +  +         + D+M   G  P++ TYN LI+ + R   + EA+ +F
Sbjct: 240 DLFTYNTLISLYCKKGMHYEALSVQDRMEMAGISPDIFTYNSLIYGFCREGRMREAVQLF 299

Query: 419 KQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKA 478
           + ++ V   P+ VTY +LID + +   LD A+ + + M   GL P   TY+ I+  L + 
Sbjct: 300 RDIKDVT--PNHVTYTSLIDGYCRVNDLDEALRLKEVMSEKGLYPTVITYNSILRKLCEG 357

Query: 479 GHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTY 538
           G L+ A+ L  EM  +   P+ VT N +I    K  + +SALK+   M  AG + D+ TY
Sbjct: 358 GRLRDANILLNEMSERKIEPDNVTCNTLINAYCKIGDMRSALKVKDKMVGAGLKLDQFTY 417

Query: 539 SIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQ 598
             ++        +D+A+ +   M    + P    Y  LVD + K  N     +  + +++
Sbjct: 418 KALIHGFCKAKEIDKAKELLFGMMDAGFSPSYCTYSWLVDSYCKQQNEEAVIKLPDELVR 477

Query: 599 AGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLL 646
            GL  +V    +L+  F ++ ++  A  +L  M + G+      YT L
Sbjct: 478 RGLCVDVSVYRALIRRFCKIEKIDCAQRVLGLMKDKGIFGDSVVYTSL 525



 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 64/225 (28%), Positives = 102/225 (45%)

Query: 362 TYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQM 421
           TYT+++    R        +L + M   G  P V+TYN ++        L +A  +  +M
Sbjct: 311 TYTSLIDGYCRVNDLDEALRLKEVMSEKGLYPTVITYNSILRKLCEGGRLRDANILLNEM 370

Query: 422 QVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHL 481
                EPD VT  TLI+ + K G +  A+ +  KM  AGL  D FTY  +I+   KA  +
Sbjct: 371 SERKIEPDNVTCNTLINAYCKIGDMRSALKVKDKMVGAGLKLDQFTYKALIHGFCKAKEI 430

Query: 482 QAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIV 541
             A +L   M++ G  P+  TY+ ++    K +N ++ +KL  ++   G   D   Y  +
Sbjct: 431 DKAKELLFGMMDAGFSPSYCTYSWLVDSYCKQQNEEAVIKLPDELVRRGLCVDVSVYRAL 490

Query: 542 MEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNV 586
           +        +D A+ V   M+ K    D  VY  L   + K G V
Sbjct: 491 IRRFCKIEKIDCAQRVLGLMKDKGIFGDSVVYTSLAYGYWKVGKV 535



 Score = 46.2 bits (108), Expect = 0.072,   Method: Compositional matrix adjust.
 Identities = 35/150 (23%), Positives = 62/150 (41%)

Query: 354 AGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNE 413
           AG K D+ TY  ++    +A++     +LL  M+  G  P+  TY+ L+ SY +      
Sbjct: 408 AGLKLDQFTYKALIHGFCKAKEIDKAKELLFGMMDAGFSPSYCTYSWLVDSYCKQQNEEA 467

Query: 414 ALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIIN 473
            + +  ++   G   D   Y  LI    K   +D A  +   M+  G+  D+  Y+ +  
Sbjct: 468 VIKLPDELVRRGLCVDVSVYRALIRRFCKIEKIDCAQRVLGLMKDKGIFGDSVVYTSLAY 527

Query: 474 CLGKAGHLQAAHQLFCEMVNQGCIPNLVTY 503
              K G +     +  EM  +  +  L  Y
Sbjct: 528 GYWKVGKVNVTSDILDEMYKKRLMITLKIY 557



 Score = 45.4 bits (106), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 48/205 (23%), Positives = 88/205 (42%), Gaps = 6/205 (2%)

Query: 544 VLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRP 603
           V G+     EA  VF  MR   + P      +L++   K       W+ Y+ M++ G+  
Sbjct: 145 VYGNSKMTHEAIQVFEHMRVNGFRPHLHACTVLLNSLAKDRLTDTVWKIYKKMVKLGVVA 204

Query: 604 NVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGFCH 663
           N+   N LL A  + G +  A  +L  M    + P L TY  L+S   +    Y+     
Sbjct: 205 NIHVYNVLLHACCKSGDVEKAEKVLSEMELKCVFPDLFTYNTLISLYCKKGMHYEALSVQ 264

Query: 664 ELMAVSGHPAHMFLLSMPSPG--PDGQNVRDHVGSFLEMMHSEDRESKRGLVDAVVDFLH 721
           + M ++G    +F  +    G   +G+ +R+ V  F ++   +D         +++D   
Sbjct: 265 DRMEMAGISPDIFTYNSLIYGFCREGR-MREAVQLFRDI---KDVTPNHVTYTSLIDGYC 320

Query: 722 KSGLKEEAGSVWEVAAQKNVYPDAV 746
           +    +EA  + EV ++K +YP  +
Sbjct: 321 RVNDLDEALRLKEVMSEKGLYPTVI 345


>gi|152717462|dbj|BAF73723.1| pentatricopeptide repeat protein [Raphanus sativus]
          Length = 687

 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 116/401 (28%), Positives = 183/401 (45%), Gaps = 20/401 (4%)

Query: 362 TYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQM 421
           T+TT++  L R  +      LLD+M+ DG QP  +TY  ++    +      ALD+ ++M
Sbjct: 186 TFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKIGDTVSALDLLRKM 245

Query: 422 QVVG-CEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGH 480
           + +    P+ V Y  +ID   K G    A +++ +MQ  G+ PD FTY+ +I     +G 
Sbjct: 246 EEISHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGR 305

Query: 481 LQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSI 540
              A QL  EM+ +   P++VTYN +I    K   +  A +LY +M   G  P+ +TYS 
Sbjct: 306 WSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSS 365

Query: 541 VMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAG 600
           +++       LD AE +F  M  K   P+   +  L+D +  A  +    E    M + G
Sbjct: 366 MIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETG 425

Query: 601 LRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTY-TLLLSCCTEARSPYDM 659
           L  +  T N+L+  F  VG L+ A  LLQ M++ GL P + T  TLL   C   +    +
Sbjct: 426 LVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDAL 485

Query: 660 GFCHELMAVSGHPAHMFLLSMPSPG--PDGQNVRDHV------GSFLEMMHSEDRESKRG 711
               E+  V          S P  G  PD Q     +      G FLE     +    RG
Sbjct: 486 ----EMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRG 541

Query: 712 LV------DAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAV 746
           +V       +++D L K    +EA  +++    K+  P+ V
Sbjct: 542 IVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVV 582



 Score =  141 bits (355), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 98/344 (28%), Positives = 165/344 (47%), Gaps = 21/344 (6%)

Query: 333 VLKQLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQ-------FGAINKLLDQ 385
           V+ +++   + +  +  + R+   + D +++T ++       +       FG I KL   
Sbjct: 88  VVVRMERPDLVISLYQKMERKQ-IRCDIYSFTILIKCFCSCSKLPFALSTFGKITKL--- 143

Query: 386 MVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGF 445
               G  P+VVT+N L+H     + ++EAL++F QM    C P+ VT+ TL++   + G 
Sbjct: 144 ----GLHPDVVTFNTLLHGLCVEDRVSEALNLFHQMFETTCRPNVVTFTTLMNGLCREGR 199

Query: 446 LDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVN-QGCIPNLVTYN 504
           +  A+ +  +M   GL P   TY  I++ + K G   +A  L  +M      IPN+V Y+
Sbjct: 200 IVEAVALLDRMMEDGLQPTQITYGTIVDGMCKIGDTVSALDLLRKMEEISHIIPNVVIYS 259

Query: 505 IMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHC--GYLDEAEAVFAEMR 562
            +I    K   +  A  L+ +MQ  G  PD  TY+ +  ++G C  G   +AE +  EM 
Sbjct: 260 AIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSM--IVGFCSSGRWSDAEQLLQEML 317

Query: 563 RKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLS 622
            +   PD   Y  L++ + K G   +A E Y+ ML  G+ PN  T +S++  F +  +L 
Sbjct: 318 ERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLD 377

Query: 623 DAYHLLQGMLNLGLKPSLQTY-TLLLSCCTEARSPYDMGFCHEL 665
            A H+   M   G  P+L T+ TL+   C   R    M   HE+
Sbjct: 378 AAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEM 421



 Score =  141 bits (355), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 86/298 (28%), Positives = 149/298 (50%), Gaps = 11/298 (3%)

Query: 362 TYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQM 421
           TY++M+    +  +  A   +   M   GC PN++T+N LI  Y  A  +++ +++  +M
Sbjct: 362 TYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEM 421

Query: 422 QVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHL 481
              G   D  TY TLI      G L+ A+D+ ++M ++GL PD  T   +++ L   G L
Sbjct: 422 TETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKL 481

Query: 482 QAAHQLFCEMVN-----------QGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAG 530
           + A ++F  M              G  P++ TYNI+I+       +  A +LY +M + G
Sbjct: 482 KDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRG 541

Query: 531 FEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAW 590
             PD +TYS +++ L     LDEA  +F  M  K++ P+   +  L++ + KAG V    
Sbjct: 542 IVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGL 601

Query: 591 EWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
           E +  M + G+  N  T  +L+  F +VG ++ A  + Q M++ G+ P   T   +L+
Sbjct: 602 ELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLT 659



 Score =  133 bits (334), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 93/354 (26%), Positives = 161/354 (45%), Gaps = 47/354 (13%)

Query: 340 HTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYN 399
           H+ A   F  ++ +  F  D  TY +M+     + ++    +LL +M+     P+VVTYN
Sbjct: 271 HSDAQNLFTEMQEKGIFP-DLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYN 329

Query: 400 RLIHS-----------------------------------YGRANYLNEALDVFKQMQVV 424
            LI++                                   + + N L+ A  +F  M   
Sbjct: 330 ALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATK 389

Query: 425 GCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAA 484
           GC P+ +T+ TLID +  A  +D  M++  +M   GL  DT TY+ +I+     G L AA
Sbjct: 390 GCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAA 449

Query: 485 HQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNA-----------GFEP 533
             L  EM++ G  P++VT + ++         + AL++++ MQ +           G EP
Sbjct: 450 LDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEP 509

Query: 534 DKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWY 593
           D  TY+I++  L + G   EAE ++ EM  +  VPD   Y  ++D   K   + +A + +
Sbjct: 510 DVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMF 569

Query: 594 EAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
           ++M      PNV T  +L++ + + G++ D   L   M   G+  +  TY  L+
Sbjct: 570 DSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLI 623



 Score =  132 bits (331), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 84/296 (28%), Positives = 148/296 (50%), Gaps = 15/296 (5%)

Query: 349 WLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRA 408
           +L    G   +  T+ T++     A++     +LL +M   G   +  TYN LIH +   
Sbjct: 384 YLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLV 443

Query: 409 NYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAA--------- 459
             LN ALD+ ++M   G  PD VT  TL+D     G L  A++M+K MQ +         
Sbjct: 444 GDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHP 503

Query: 460 --GLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQ 517
             G+ PD  TY+++I+ L   G    A +L+ EM ++G +P+ +TY+ MI    K     
Sbjct: 504 FNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLD 563

Query: 518 SALKLYRDMQNAGFEPDKVTYSIVMEVLGHC--GYLDEAEAVFAEMRRKNWVPDEPVYGL 575
            A +++  M +  F P+ VT++ ++   G+C  G +D+   +F EM R+  V +   Y  
Sbjct: 564 EATQMFDSMGSKSFSPNVVTFTTLIN--GYCKAGRVDDGLELFCEMGRRGIVANAITYIT 621

Query: 576 LVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGM 631
           L+  + K GN+  A + ++ M+ +G+ P+  T  ++L+      +L  A  +L+ +
Sbjct: 622 LICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRAVAMLEKL 677



 Score =  114 bits (284), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 80/317 (25%), Positives = 150/317 (47%), Gaps = 14/317 (4%)

Query: 363 YTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQ 422
           +  ++G++ R  +   +  L  +M R   + ++ ++  LI  +   + L  AL  F ++ 
Sbjct: 82  FCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFTILIKCFCSCSKLPFALSTFGKIT 141

Query: 423 VVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQ 482
            +G  PD VT+ TL+        +  A++++ +M      P+  T++ ++N L + G + 
Sbjct: 142 KLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQMFETTCRPNVVTFTTLMNGLCREGRIV 201

Query: 483 AAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAG-FEPDKVTYSIV 541
            A  L   M+  G  P  +TY  ++    K  +  SAL L R M+      P+ V YS +
Sbjct: 202 EAVALLDRMMEDGLQPTQITYGTIVDGMCKIGDTVSALDLLRKMEEISHIIPNVVIYSAI 261

Query: 542 MEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGL 601
           ++ L   G   +A+ +F EM+ K   PD   Y  ++  +  +G    A +  + ML+  +
Sbjct: 262 IDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKI 321

Query: 602 RPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGF 661
            P+V T N+L++AF++ G+  +A  L   ML  G+ P+  TY+ ++            GF
Sbjct: 322 SPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMID-----------GF 370

Query: 662 CHELMAVSGHPAHMFLL 678
           C +    +    HMF L
Sbjct: 371 CKQNRLDAAE--HMFYL 385



 Score =  103 bits (256), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 69/272 (25%), Positives = 126/272 (46%), Gaps = 9/272 (3%)

Query: 382 LLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHA 441
           L   M+R    P+VV + +L+    R    +  + ++++M+      D  ++  LI    
Sbjct: 66  LFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFTILIKCFC 125

Query: 442 KAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLV 501
               L  A+  + K+   GL PD  T++ +++ L     +  A  LF +M    C PN+V
Sbjct: 126 SCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQMFETTCRPNVV 185

Query: 502 TYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEM 561
           T+  ++    +      A+ L   M   G +P ++TY  +++  G C   D   A+  ++
Sbjct: 186 TFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVD--GMCKIGDTVSAL--DL 241

Query: 562 RRK-----NWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFL 616
            RK     + +P+  +Y  ++D   K G    A   +  M + G+ P++ T NS++  F 
Sbjct: 242 LRKMEEISHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFC 301

Query: 617 RVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
             G+ SDA  LLQ ML   + P + TY  L++
Sbjct: 302 SSGRWSDAEQLLQEMLERKISPDVVTYNALIN 333



 Score = 98.6 bits (244), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 63/246 (25%), Positives = 116/246 (47%), Gaps = 2/246 (0%)

Query: 411 LNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSV 470
           L +A+D+F  M      P  V +C L+ +  +    D+ + +Y+KM+   +  D +++++
Sbjct: 60  LEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFTI 119

Query: 471 IINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAG 530
           +I C      L  A   F ++   G  P++VT+N ++           AL L+  M    
Sbjct: 120 LIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQMFETT 179

Query: 531 FEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAW 590
             P+ VT++ +M  L   G + EA A+   M      P +  YG +VD   K G+   A 
Sbjct: 180 CRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKIGDTVSAL 239

Query: 591 EWYEAMLQAG-LRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTY-TLLLS 648
           +    M +   + PNV   ++++ +  + G+ SDA +L   M   G+ P L TY ++++ 
Sbjct: 240 DLLRKMEEISHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVG 299

Query: 649 CCTEAR 654
            C+  R
Sbjct: 300 FCSSGR 305



 Score = 57.8 bits (138), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 50/238 (21%), Positives = 102/238 (42%), Gaps = 9/238 (3%)

Query: 512 KARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEP 571
           + +  + A+ L+ DM  +   P  V +  +M V+      D   +++ +M RK    D  
Sbjct: 56  EIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIY 115

Query: 572 VYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGM 631
            + +L+  +     +  A   +  + + GL P+V T N+LL       ++S+A +L   M
Sbjct: 116 SFTILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQM 175

Query: 632 LNLGLKPSLQTYTLLLS-CCTEARSPYDMGFCHELMAVSGHPAHMFLLSMPSPGPDGQNV 690
                +P++ T+T L++  C E R    +     +M     P  +   ++     DG   
Sbjct: 176 FETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTI----VDGMCK 231

Query: 691 RDHVGSFLEMMHSEDRES----KRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPD 744
                S L+++   +  S       +  A++D L K G   +A +++    +K ++PD
Sbjct: 232 IGDTVSALDLLRKMEEISHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPD 289


>gi|224067108|ref|XP_002302359.1| predicted protein [Populus trichocarpa]
 gi|222844085|gb|EEE81632.1| predicted protein [Populus trichocarpa]
          Length = 375

 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 87/293 (29%), Positives = 148/293 (50%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           G K D  TY  +V  + +  +     K L+ M   G QPNV+T+N ++ S        +A
Sbjct: 46  GCKPDVVTYNVLVNGMCKEGRLDEAIKFLNSMPSYGSQPNVITHNIILRSMCSTGRWMDA 105

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
             +  +M   GC P  VT+  LI+   + G L  A+D+ +KM   G +P++ +Y+ +++ 
Sbjct: 106 EKLLTEMVRKGCSPSVVTFNILINFLCRKGLLGRAIDILEKMPTHGCTPNSLSYNPLLHG 165

Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPD 534
             K   +  A Q    MV++GC P++VTYN M+    K     +A++L   + + G  P 
Sbjct: 166 FCKEKKMDRAIQYLEIMVSRGCYPDIVTYNTMLTALCKDGKVDAAVELLNQLSSKGCSPV 225

Query: 535 KVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYE 594
            +TY+ V++ L   G  D+A  +  EMR K   PD   Y  L+    + G V +A +++ 
Sbjct: 226 LITYNTVIDGLSKVGKTDQAVELLHEMRGKGLKPDVITYSSLIAGLSREGKVEEAIKFFH 285

Query: 595 AMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
            +   G++PN  T NS++    +  Q   A   L  M++ G KP+  +YT+L+
Sbjct: 286 DVEGFGVKPNAFTYNSIMFGLCKAQQTDRAIDFLAYMISKGCKPTEVSYTILI 338



 Score =  131 bits (329), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 77/256 (30%), Positives = 131/256 (51%)

Query: 381 KLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIH 440
           KLL +MVR GC P+VVT+N LI+   R   L  A+D+ ++M   GC P+ ++Y  L+   
Sbjct: 107 KLLTEMVRKGCSPSVVTFNILINFLCRKGLLGRAIDILEKMPTHGCTPNSLSYNPLLHGF 166

Query: 441 AKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNL 500
            K   +D A+   + M + G  PD  TY+ ++  L K G + AA +L  ++ ++GC P L
Sbjct: 167 CKEKKMDRAIQYLEIMVSRGCYPDIVTYNTMLTALCKDGKVDAAVELLNQLSSKGCSPVL 226

Query: 501 VTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAE 560
           +TYN +I   +K      A++L  +M+  G +PD +TYS ++  L   G ++EA   F +
Sbjct: 227 ITYNTVIDGLSKVGKTDQAVELLHEMRGKGLKPDVITYSSLIAGLSREGKVEEAIKFFHD 286

Query: 561 MRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQ 620
           +      P+   Y  ++    KA    +A ++   M+  G +P   +   L+      G 
Sbjct: 287 VEGFGVKPNAFTYNSIMFGLCKAQQTDRAIDFLAYMISKGCKPTEVSYTILIEGIANEGL 346

Query: 621 LSDAYHLLQGMLNLGL 636
             +A  LL  + + G+
Sbjct: 347 AKEALELLNELCSRGV 362



 Score =  130 bits (328), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 91/350 (26%), Positives = 159/350 (45%), Gaps = 2/350 (0%)

Query: 381 KLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIH 440
           ++LD+ +   C P+V+TY  LI +    + + +A+ +  +M   GC+PD VTY  L++  
Sbjct: 2   EVLDRQLEKECYPDVITYTILIEATCAESGVGQAMKLLDEMGSRGCKPDVVTYNVLVNGM 61

Query: 441 AKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNL 500
            K G LD A+     M + G  P+  T+++I+  +   G    A +L  EMV +GC P++
Sbjct: 62  CKEGRLDEAIKFLNSMPSYGSQPNVITHNIILRSMCSTGRWMDAEKLLTEMVRKGCSPSV 121

Query: 501 VTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAE 560
           VT+NI+I    +      A+ +   M   G  P+ ++Y+ ++        +D A      
Sbjct: 122 VTFNILINFLCRKGLLGRAIDILEKMPTHGCTPNSLSYNPLLHGFCKEKKMDRAIQYLEI 181

Query: 561 MRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQ 620
           M  +   PD   Y  ++    K G V  A E    +   G  P + T N+++    +VG+
Sbjct: 182 MVSRGCYPDIVTYNTMLTALCKDGKVDAAVELLNQLSSKGCSPVLITYNTVIDGLSKVGK 241

Query: 621 LSDAYHLLQGMLNLGLKPSLQTYTLLLSCCT-EARSPYDMGFCHELMAVSGHPAHMFLLS 679
              A  LL  M   GLKP + TY+ L++  + E +    + F H++      P + F  +
Sbjct: 242 TDQAVELLHEMRGKGLKPDVITYSSLIAGLSREGKVEEAIKFFHDVEGFGVKP-NAFTYN 300

Query: 680 MPSPGPDGQNVRDHVGSFLEMMHSEDRESKRGLVDAVVDFLHKSGLKEEA 729
               G       D    FL  M S+  +        +++ +   GL +EA
Sbjct: 301 SIMFGLCKAQQTDRAIDFLAYMISKGCKPTEVSYTILIEGIANEGLAKEA 350



 Score =  125 bits (315), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 69/240 (28%), Positives = 121/240 (50%)

Query: 362 TYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQM 421
           T+  ++  L R    G    +L++M   GC PN ++YN L+H + +   ++ A+   + M
Sbjct: 123 TFNILINFLCRKGLLGRAIDILEKMPTHGCTPNSLSYNPLLHGFCKEKKMDRAIQYLEIM 182

Query: 422 QVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHL 481
              GC PD VTY T++    K G +D A+++  ++ + G SP   TY+ +I+ L K G  
Sbjct: 183 VSRGCYPDIVTYNTMLTALCKDGKVDAAVELLNQLSSKGCSPVLITYNTVIDGLSKVGKT 242

Query: 482 QAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIV 541
             A +L  EM  +G  P+++TY+ +IA  ++    + A+K + D++  G +P+  TY+ +
Sbjct: 243 DQAVELLHEMRGKGLKPDVITYSSLIAGLSREGKVEEAIKFFHDVEGFGVKPNAFTYNSI 302

Query: 542 MEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGL 601
           M  L      D A    A M  K   P E  Y +L++     G  ++A E    +   G+
Sbjct: 303 MFGLCKAQQTDRAIDFLAYMISKGCKPTEVSYTILIEGIANEGLAKEALELLNELCSRGV 362



 Score = 64.3 bits (155), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 37/136 (27%), Positives = 69/136 (50%)

Query: 362 TYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQM 421
           TY T++  L +  +     +LL +M   G +P+V+TY+ LI    R   + EA+  F  +
Sbjct: 228 TYNTVIDGLSKVGKTDQAVELLHEMRGKGLKPDVITYSSLIAGLSREGKVEEAIKFFHDV 287

Query: 422 QVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHL 481
           +  G +P+  TY +++    KA   D A+D    M + G  P   +Y+++I  +   G  
Sbjct: 288 EGFGVKPNAFTYNSIMFGLCKAQQTDRAIDFLAYMISKGCKPTEVSYTILIEGIANEGLA 347

Query: 482 QAAHQLFCEMVNQGCI 497
           + A +L  E+ ++G +
Sbjct: 348 KEALELLNELCSRGVV 363



 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 31/121 (25%), Positives = 56/121 (46%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           R  G K D  TY++++  L R  +     K    +   G +PN  TYN ++    +A   
Sbjct: 253 RGKGLKPDVITYSSLIAGLSREGKVEEAIKFFHDVEGFGVKPNAFTYNSIMFGLCKAQQT 312

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
           + A+D    M   GC+P  V+Y  LI+  A  G    A+++  ++ + G+   +    V+
Sbjct: 313 DRAIDFLAYMISKGCKPTEVSYTILIEGIANEGLAKEALELLNELCSRGVVKKSSAEQVV 372

Query: 472 I 472
           +
Sbjct: 373 V 373


>gi|357115764|ref|XP_003559656.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
           distachyon]
          Length = 867

 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 105/386 (27%), Positives = 187/386 (48%), Gaps = 9/386 (2%)

Query: 271 FSKPSREMKIPAGLAPFSRHFASTGNVVESVSRILRQWKWGPLAEEALGNTNYSMDAYQA 330
           F++  RE   P  + P + H  + G +++   R  R+   GP     L       D    
Sbjct: 148 FNRICREEAGPR-VVPLTVH--TYGILMDCCCRA-RRPDLGPAFFARLLRAGLRTDGIVT 203

Query: 331 NQVLKQL---QDHTVALGFFNWLRRQAGFKHDEHTYTTMV-GILGRARQFGAINKLLDQM 386
           N  LK L   +    AL        + G   D  +Y T++  + G +R   A++ LL   
Sbjct: 204 NTFLKCLCYAKRTDEALSMLLHRMSELGCVPDAFSYNTVIKSLCGGSRSQEALDMLLRMT 263

Query: 387 VRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFL 446
             DGC P+VV+Y  +IH       +++A ++F +M   G  P+ VTY +++    KA  +
Sbjct: 264 KGDGCSPDVVSYTMVIHGLFMEGEISKACNLFNEMVQKGVVPNVVTYNSIVHALCKARAM 323

Query: 447 DVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIM 506
           D A  + ++M    + PD  TY+ +I+     G  + A ++F EM  +G IP++VT+N +
Sbjct: 324 DKAELVLRQMFDNSIQPDEVTYTAMIHGYSCLGRWKEAAKMFKEMTREGLIPDIVTFNSL 383

Query: 507 IALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNW 566
           +    K +  + A +++  +   G +PD ++YSI++      G   +   +F  M     
Sbjct: 384 MDSLCKHKRSKEAAEIFHSIATKGHKPDIISYSILLHGYATEGRFVDMNNLFHSMTDNGI 443

Query: 567 VPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYH 626
           V D   + +L++   K G + +A   +  M   G+ PNV T  ++++A  R+G+L+DA  
Sbjct: 444 VADSHCFNILINAHAKRGMMDEALLIFTEMRGQGVSPNVVTYATVIAALCRMGRLADAME 503

Query: 627 LLQGMLNLGLKPSLQTY-TLLLSCCT 651
            L  M+++GLKP+   Y +L+   CT
Sbjct: 504 KLSQMISIGLKPNTVVYHSLIQGFCT 529



 Score =  144 bits (364), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 103/386 (26%), Positives = 182/386 (47%), Gaps = 14/386 (3%)

Query: 281 PAGLAPFSRHFASTGNVVESVSRILRQWKWGPLAEEALGNTNYSM-------DAYQANQV 333
           PA  A   R    T  +V +    L+   +    +EAL    + M       DA+  N V
Sbjct: 185 PAFFARLLRAGLRTDGIVTNT--FLKCLCYAKRTDEALSMLLHRMSELGCVPDAFSYNTV 242

Query: 334 LKQLQDHTVALGFFNWLRRQA---GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDG 390
           +K L   + +    + L R     G   D  +YT ++  L    +      L ++MV+ G
Sbjct: 243 IKSLCGGSRSQEALDMLLRMTKGDGCSPDVVSYTMVIHGLFMEGEISKACNLFNEMVQKG 302

Query: 391 CQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAM 450
             PNVVTYN ++H+  +A  +++A  V +QM     +PD VTY  +I  ++  G    A 
Sbjct: 303 VVPNVVTYNSIVHALCKARAMDKAELVLRQMFDNSIQPDEVTYTAMIHGYSCLGRWKEAA 362

Query: 451 DMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQ 510
            M+K+M   GL PD  T++ +++ L K    + A ++F  +  +G  P++++Y+I++   
Sbjct: 363 KMFKEMTREGLIPDIVTFNSLMDSLCKHKRSKEAAEIFHSIATKGHKPDIISYSILLHGY 422

Query: 511 AKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDE 570
           A    +     L+  M + G   D   ++I++      G +DEA  +F EMR +   P+ 
Sbjct: 423 ATEGRFVDMNNLFHSMTDNGIVADSHCFNILINAHAKRGMMDEALLIFTEMRGQGVSPNV 482

Query: 571 PVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQG 630
             Y  ++    + G +  A E    M+  GL+PN    +SL+  F   G L  A  L+  
Sbjct: 483 VTYATVIAALCRMGRLADAMEKLSQMISIGLKPNTVVYHSLIQGFCTHGDLIKAKELVSE 542

Query: 631 MLNLGL-KPSLQTYTLLL-SCCTEAR 654
           M++ G+ +P++  ++ ++ S C E R
Sbjct: 543 MMDQGIPRPNITFFSSIIHSLCNEGR 568



 Score =  136 bits (342), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 88/325 (27%), Positives = 166/325 (51%), Gaps = 23/325 (7%)

Query: 329 QANQVLKQLQDHTVALGFFNWLRRQAGFKHDEHTYTTMV---GILGRARQFGAINKLLDQ 385
           +A  VL+Q+ D+++              + DE TYT M+     LGR ++     K+  +
Sbjct: 325 KAELVLRQMFDNSI--------------QPDEVTYTAMIHGYSCLGRWKEAA---KMFKE 367

Query: 386 MVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAG- 444
           M R+G  P++VT+N L+ S  +     EA ++F  +   G +PD ++Y  L+  +A  G 
Sbjct: 368 MTREGLIPDIVTFNSLMDSLCKHKRSKEAAEIFHSIATKGHKPDIISYSILLHGYATEGR 427

Query: 445 FLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYN 504
           F+D+  +++  M   G+  D+  ++++IN   K G +  A  +F EM  QG  PN+VTY 
Sbjct: 428 FVDMN-NLFHSMTDNGIVADSHCFNILINAHAKRGMMDEALLIFTEMRGQGVSPNVVTYA 486

Query: 505 IMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRK 564
            +IA   +      A++    M + G +P+ V Y  +++     G L +A+ + +EM  +
Sbjct: 487 TVIAALCRMGRLADAMEKLSQMISIGLKPNTVVYHSLIQGFCTHGDLIKAKELVSEMMDQ 546

Query: 565 NW-VPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSD 623
               P+   +  ++      G V  A + +  ++  G RP++ T NSL+  +  VG++  
Sbjct: 547 GIPRPNITFFSSIIHSLCNEGRVMNAQDVFNLVIHIGDRPDIFTFNSLIDGYCLVGKMDK 606

Query: 624 AYHLLQGMLNLGLKPSLQTYTLLLS 648
           A+ +L  M++ G +P + TY+ L++
Sbjct: 607 AFGVLDAMVSAGTEPDVVTYSTLIN 631



 Score =  114 bits (286), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 71/269 (26%), Positives = 135/269 (50%), Gaps = 4/269 (1%)

Query: 382 LLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHA 441
           + + ++  G +P++ T+N LI  Y     +++A  V   M   G EPD VTY TLI+ + 
Sbjct: 575 VFNLVIHIGDRPDIFTFNSLIDGYCLVGKMDKAFGVLDAMVSAGTEPDVVTYSTLINGYF 634

Query: 442 KAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLV 501
           K+G +D  + ++++M    + P T TYS++++ L +AG   AA ++F EM+  G   ++ 
Sbjct: 635 KSGRIDDGLILFREMLCKRVKPTTVTYSLVLDGLFRAGRTSAAKKMFHEMIESGTAMSIS 694

Query: 502 TYNIMIALQAKARN--YQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFA 559
           TY I+  LQ   RN     A+ L+  +     + +    + ++  L      +EA  +FA
Sbjct: 695 TYTII--LQGLCRNNCTDEAITLFHKLGAMNLKFEIAILNTMIHALYKVKRREEAHDLFA 752

Query: 560 EMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVG 619
            +     VP+   YG+++    K G+V +A   + +M + G  P+    N ++   L+ G
Sbjct: 753 SVSASGLVPNASTYGVMIINLLKEGSVEEADIMFSSMEKTGCAPSSRLLNDIIRMLLQKG 812

Query: 620 QLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
           ++  A + +  +    +     T +LL+S
Sbjct: 813 EIVKAGYYMSKVDGTIISLEASTTSLLIS 841



 Score =  106 bits (265), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 75/291 (25%), Positives = 140/291 (48%), Gaps = 11/291 (3%)

Query: 355 GFKHDEHTYTTMV------GILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRA 408
           G K +   Y +++      G L +A++   +++++DQ +    +PN+  ++ +IHS    
Sbjct: 512 GLKPNTVVYHSLIQGFCTHGDLIKAKEL--VSEMMDQGIP---RPNITFFSSIIHSLCNE 566

Query: 409 NYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTY 468
             +  A DVF  +  +G  PD  T+ +LID +   G +D A  +   M +AG  PD  TY
Sbjct: 567 GRVMNAQDVFNLVIHIGDRPDIFTFNSLIDGYCLVGKMDKAFGVLDAMVSAGTEPDVVTY 626

Query: 469 SVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQN 528
           S +IN   K+G +     LF EM+ +   P  VTY++++    +A    +A K++ +M  
Sbjct: 627 STLINGYFKSGRIDDGLILFREMLCKRVKPTTVTYSLVLDGLFRAGRTSAAKKMFHEMIE 686

Query: 529 AGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRK 588
           +G      TY+I+++ L      DEA  +F ++   N   +  +   ++    K     +
Sbjct: 687 SGTAMSISTYTIILQGLCRNNCTDEAITLFHKLGAMNLKFEIAILNTMIHALYKVKRREE 746

Query: 589 AWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPS 639
           A + + ++  +GL PN  T   ++   L+ G + +A  +   M   G  PS
Sbjct: 747 AHDLFASVSASGLVPNASTYGVMIINLLKEGSVEEADIMFSSMEKTGCAPS 797



 Score = 91.3 bits (225), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 65/263 (24%), Positives = 124/263 (47%), Gaps = 6/263 (2%)

Query: 366 MVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVG 425
           +VG + +A  FG    +LD MV  G +P+VVTY+ LI+ Y ++  +++ L +F++M    
Sbjct: 600 LVGKMDKA--FG----VLDAMVSAGTEPDVVTYSTLINGYFKSGRIDDGLILFREMLCKR 653

Query: 426 CEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAH 485
            +P  VTY  ++D   +AG    A  M+ +M  +G +    TY++I+  L +      A 
Sbjct: 654 VKPTTVTYSLVLDGLFRAGRTSAAKKMFHEMIESGTAMSISTYTIILQGLCRNNCTDEAI 713

Query: 486 QLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVL 545
            LF ++        +   N MI    K +  + A  L+  +  +G  P+  TY +++  L
Sbjct: 714 TLFHKLGAMNLKFEIAILNTMIHALYKVKRREEAHDLFASVSASGLVPNASTYGVMIINL 773

Query: 546 GHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNV 605
              G ++EA+ +F+ M +    P   +   ++ +  + G + KA  +   +    +    
Sbjct: 774 LKEGSVEEADIMFSSMEKTGCAPSSRLLNDIIRMLLQKGEIVKAGYYMSKVDGTIISLEA 833

Query: 606 PTCNSLLSAFLRVGQLSDAYHLL 628
            T + L+S F   G+  +    L
Sbjct: 834 STTSLLISLFASKGRYREQIKFL 856



 Score = 86.7 bits (213), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 80/324 (24%), Positives = 145/324 (44%), Gaps = 16/324 (4%)

Query: 432 TYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHL-QAAHQLFCE 490
           TY  L+D   +A   D+    + ++  AGL  D    +  + CL  A    +A   L   
Sbjct: 167 TYGILMDCCCRARRPDLGPAFFARLLRAGLRTDGIVTNTFLKCLCYAKRTDEALSMLLHR 226

Query: 491 MVNQGCIPNLVTYNIMI-ALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCG 549
           M   GC+P+  +YN +I +L   +R+ ++   L R  +  G  PD V+Y++V+  L   G
Sbjct: 227 MSELGCVPDAFSYNTVIKSLCGGSRSQEALDMLLRMTKGDGCSPDVVSYTMVIHGLFMEG 286

Query: 550 YLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCN 609
            + +A  +F EM +K  VP+   Y  +V    KA  + KA      M    ++P+  T  
Sbjct: 287 EISKACNLFNEMVQKGVVPNVVTYNSIVHALCKARAMDKAELVLRQMFDNSIQPDEVTYT 346

Query: 610 SLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTY-TLLLSCCTEARSPYDMGFCHELMAV 668
           +++  +  +G+  +A  + + M   GL P + T+ +L+ S C   RS       H + A 
Sbjct: 347 AMIHGYSCLGRWKEAAKMFKEMTREGLIPDIVTFNSLMDSLCKHKRSKEAAEIFHSI-AT 405

Query: 669 SGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRESKRGLV------DAVVDFLHK 722
            GH   +   S+   G   +      G F++M +     +  G+V      + +++   K
Sbjct: 406 KGHKPDIISYSILLHGYATE------GRFVDMNNLFHSMTDNGIVADSHCFNILINAHAK 459

Query: 723 SGLKEEAGSVWEVAAQKNVYPDAV 746
            G+ +EA  ++     + V P+ V
Sbjct: 460 RGMMDEALLIFTEMRGQGVSPNVV 483


>gi|449439615|ref|XP_004137581.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g74580-like [Cucumis sativus]
          Length = 857

 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 96/307 (31%), Positives = 157/307 (51%), Gaps = 5/307 (1%)

Query: 363 YTTMVGILGRARQFGAIN---KLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFK 419
           +T  + I G  R+ GAI+   +LL+ +V +G  P+V++YN LI  + + + L EA     
Sbjct: 252 FTFNIFIQGLCRK-GAIDEAARLLESIVSEGLTPDVISYNTLICGFCKHSKLVEAECYLH 310

Query: 420 QMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAG 479
           +M   G EP+  TY T+I+   KAG +  A  + +     G  PD FTYS +IN L   G
Sbjct: 311 KMVNSGVEPNEFTYNTIINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGLCNDG 370

Query: 480 HLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYS 539
            +  A  +F E + +G   +++ YN ++   +K      AL+L +DM   G  PD  TY+
Sbjct: 371 DMNRAMAVFYEAMEKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYN 430

Query: 540 IVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQA 599
           +V+  L   G L +A  +  +   K  +PD   +  L+D + K  N+ KA E  + ML  
Sbjct: 431 LVVNGLCKMGCLSDANGILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSH 490

Query: 600 GLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL-SCCTEARSPYD 658
           G+ P+V T N+LL+   +  +L +     + ML  G  P++ TY +L+ S C + +    
Sbjct: 491 GITPDVITYNTLLNGLCKARKLDNVVDTFKAMLEKGCTPNIITYNILIESFCKDRKVSEA 550

Query: 659 MGFCHEL 665
           M    E+
Sbjct: 551 MELFKEM 557



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 88/318 (27%), Positives = 165/318 (51%), Gaps = 3/318 (0%)

Query: 333 VLKQLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQ 392
           V++   D   AL  FN ++ + GFKH   TY  M+  LG   +F A+  +L +M R    
Sbjct: 13  VIRYQNDPLNALKMFNQVKTEDGFKHTLETYKCMIEKLGLHGKFEAMEDVLAEM-RKNVD 71

Query: 393 PNVV--TYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAM 450
             ++   Y  ++  YGR   + EA++VF++M    CEP   +Y  +++I  + G+   A 
Sbjct: 72  SKMLEGVYIGIMRDYGRKGKVQEAVNVFERMDFYDCEPSVQSYNAIMNILVEYGYFSQAH 131

Query: 451 DMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQ 510
            +Y +M+  G+ PD +T+++ +      G   AA +L   M  QGC  N V+Y  +I+  
Sbjct: 132 KVYMRMKDIGIYPDVYTHTIRMKSFCITGRPTAALRLLNNMPGQGCEFNAVSYCAVISGF 191

Query: 511 AKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDE 570
            K      A  L+ +M   G  PD +T++ ++ VL   G + E+E +F+++ ++   P+ 
Sbjct: 192 YKENCQIEAYHLFDEMLKQGICPDILTFNKLIHVLCKKGNVQESEKLFSKVMKRGVCPNL 251

Query: 571 PVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQG 630
             + + +    + G + +A    E+++  GL P+V + N+L+  F +  +L +A   L  
Sbjct: 252 FTFNIFIQGLCRKGAIDEAARLLESIVSEGLTPDVISYNTLICGFCKHSKLVEAECYLHK 311

Query: 631 MLNLGLKPSLQTYTLLLS 648
           M+N G++P+  TY  +++
Sbjct: 312 MVNSGVEPNEFTYNTIIN 329



 Score =  145 bits (366), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 86/304 (28%), Positives = 155/304 (50%), Gaps = 2/304 (0%)

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
           + GFKH    Y T+V  L +        +L+  M+  GC P++ TYN +++   +   L+
Sbjct: 384 EKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCLS 443

Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
           +A  +       GC PD  T+ TLID + K   +D A+++   M + G++PD  TY+ ++
Sbjct: 444 DANGILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVITYNTLL 503

Query: 473 NCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFE 532
           N L KA  L      F  M+ +GC PN++TYNI+I    K R    A++L+++M+  G  
Sbjct: 504 NGLCKARKLDNVVDTFKAMLEKGCTPNIITYNILIESFCKDRKVSEAMELFKEMKTRGLT 563

Query: 533 PDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRK-NWVPDEPVYGLLVDLWGKAGNVRKAWE 591
           PD VT   ++  L   G LD+A  +F  + ++  +     ++ ++++ + +  NV  A +
Sbjct: 564 PDIVTLCTLICGLCSNGELDKAYELFVTIEKEYKFSYSTAIFNIMINAFCEKLNVSMAEK 623

Query: 592 WYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSC-C 650
            +  M  +   P+  T   ++ ++ + G +  A+  L   ++ GL PS  T   +L+C C
Sbjct: 624 LFHKMGGSDCAPDNYTYRVMIDSYCKTGNIDLAHTFLLENISKGLVPSFTTCGKVLNCLC 683

Query: 651 TEAR 654
              R
Sbjct: 684 VTHR 687



 Score =  135 bits (341), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 80/275 (29%), Positives = 137/275 (49%)

Query: 354 AGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNE 413
           +G + +E TY T++    +A      +K+L   +  G  P+  TY+ LI+       +N 
Sbjct: 315 SGVEPNEFTYNTIINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNR 374

Query: 414 ALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIIN 473
           A+ VF +    G +   + Y TL+   +K G +  A+ + K M   G SPD +TY++++N
Sbjct: 375 AMAVFYEAMEKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVN 434

Query: 474 CLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEP 533
            L K G L  A+ +  + + +GCIP++ T+N +I    K RN   A+++   M + G  P
Sbjct: 435 GLCKMGCLSDANGILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGITP 494

Query: 534 DKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWY 593
           D +TY+ ++  L     LD     F  M  K   P+   Y +L++ + K   V +A E +
Sbjct: 495 DVITYNTLLNGLCKARKLDNVVDTFKAMLEKGCTPNIITYNILIESFCKDRKVSEAMELF 554

Query: 594 EAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLL 628
           + M   GL P++ T  +L+      G+L  AY L 
Sbjct: 555 KEMKTRGLTPDIVTLCTLICGLCSNGELDKAYELF 589



 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 82/266 (30%), Positives = 137/266 (51%)

Query: 382 LLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHA 441
           L D+M++ G  P+++T+N+LIH   +   + E+  +F ++   G  P+  T+   I    
Sbjct: 203 LFDEMLKQGICPDILTFNKLIHVLCKKGNVQESEKLFSKVMKRGVCPNLFTFNIFIQGLC 262

Query: 442 KAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLV 501
           + G +D A  + + + + GL+PD  +Y+ +I    K   L  A     +MVN G  PN  
Sbjct: 263 RKGAIDEAARLLESIVSEGLTPDVISYNTLICGFCKHSKLVEAECYLHKMVNSGVEPNEF 322

Query: 502 TYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEM 561
           TYN +I    KA   Q+A K+ RD    GF PD+ TYS ++  L + G ++ A AVF E 
Sbjct: 323 TYNTIINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAMAVFYEA 382

Query: 562 RRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQL 621
             K +     +Y  LV    K G V +A +  + M++ G  P++ T N +++   ++G L
Sbjct: 383 MEKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCL 442

Query: 622 SDAYHLLQGMLNLGLKPSLQTYTLLL 647
           SDA  +L   +  G  P + T+  L+
Sbjct: 443 SDANGILNDAIAKGCIPDIFTFNTLI 468



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 91/355 (25%), Positives = 172/355 (48%), Gaps = 12/355 (3%)

Query: 304 ILRQWKWGPLAEEALGNTNYSMDAYQAN---QVLKQLQDHTVALGFFN-----WLR-RQA 354
           I+R +      +EA+ N    MD Y      Q    + +  V  G+F+     ++R +  
Sbjct: 82  IMRDYGRKGKVQEAV-NVFERMDFYDCEPSVQSYNAIMNILVEYGYFSQAHKVYMRMKDI 140

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           G   D +T+T  +       +  A  +LL+ M   GC+ N V+Y  +I  + + N   EA
Sbjct: 141 GIYPDVYTHTIRMKSFCITGRPTAALRLLNNMPGQGCEFNAVSYCAVISGFYKENCQIEA 200

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
             +F +M   G  PD +T+  LI +  K G +  +  ++ K+   G+ P+ FT+++ I  
Sbjct: 201 YHLFDEMLKQGICPDILTFNKLIHVLCKKGNVQESEKLFSKVMKRGVCPNLFTFNIFIQG 260

Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPD 534
           L + G +  A +L   +V++G  P++++YN +I    K      A      M N+G EP+
Sbjct: 261 LCRKGAIDEAARLLESIVSEGLTPDVISYNTLICGFCKHSKLVEAECYLHKMVNSGVEPN 320

Query: 535 KVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWE-WY 593
           + TY+ ++      G +  A+ +  +   K ++PDE  Y  L++     G++ +A   +Y
Sbjct: 321 EFTYNTIINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAMAVFY 380

Query: 594 EAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
           EAM + G + ++   N+L+    + G +  A  L++ M+  G  P + TY L+++
Sbjct: 381 EAM-EKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVN 434



 Score =  103 bits (257), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 66/217 (30%), Positives = 105/217 (48%), Gaps = 1/217 (0%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           G   D  TY T++  L +AR+   +      M+  GC PN++TYN LI S+ +   ++EA
Sbjct: 491 GITPDVITYNTLLNGLCKARKLDNVVDTFKAMLEKGCTPNIITYNILIESFCKDRKVSEA 550

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAA-GLSPDTFTYSVIIN 473
           +++FK+M+  G  PD VT CTLI      G LD A +++  ++     S  T  ++++IN
Sbjct: 551 MELFKEMKTRGLTPDIVTLCTLICGLCSNGELDKAYELFVTIEKEYKFSYSTAIFNIMIN 610

Query: 474 CLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEP 533
              +  ++  A +LF +M    C P+  TY +MI    K  N   A     +  + G  P
Sbjct: 611 AFCEKLNVSMAEKLFHKMGGSDCAPDNYTYRVMIDSYCKTGNIDLAHTFLLENISKGLVP 670

Query: 534 DKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDE 570
              T   V+  L     L EA  +   M +   VP+E
Sbjct: 671 SFTTCGKVLNCLCVTHRLSEAVVIINLMVQNGIVPEE 707



 Score = 47.4 bits (111), Expect = 0.034,   Method: Compositional matrix adjust.
 Identities = 30/104 (28%), Positives = 49/104 (47%)

Query: 398 YNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQ 457
           +N +I+++     ++ A  +F +M    C PD  TY  +ID + K G +D+A     +  
Sbjct: 605 FNIMINAFCEKLNVSMAEKLFHKMGGSDCAPDNYTYRVMIDSYCKTGNIDLAHTFLLENI 664

Query: 458 AAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLV 501
           + GL P   T   ++NCL     L  A  +   MV  G +P  V
Sbjct: 665 SKGLVPSFTTCGKVLNCLCVTHRLSEAVVIINLMVQNGIVPEEV 708


>gi|357128238|ref|XP_003565781.1| PREDICTED: pentatricopeptide repeat-containing protein At1g71060,
           mitochondrial-like [Brachypodium distachyon]
          Length = 547

 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 99/367 (26%), Positives = 183/367 (49%), Gaps = 7/367 (1%)

Query: 292 ASTGNVVESVSRILRQWKWGPLAEEALGNTNYSMDAYQANQVLKQLQDHTV-ALGFFNWL 350
           +    V E V R++   +  P    AL     +M      +VL+ L +  + AL FF W 
Sbjct: 93  SDVSEVAERVCRVVSS-QPEPRIASALDALGVNMSPELVAEVLRNLSNAGILALAFFRWA 151

Query: 351 RRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANY 410
            RQ GF++   ++  ++  LG+ +QF  +  L++ M   G      T+  ++  Y RA  
Sbjct: 152 ERQQGFRYTAESFHNLIEALGKIKQFRLVWSLVEAMRCRGLLSK-DTFRLIVRRYARARK 210

Query: 411 LNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAG-LSPDTFTYS 469
           + EA++ F++M   G + D   Y  LID+ +K+  +  A  ++K+M+  G   PD  TY+
Sbjct: 211 VKEAVETFEKMSSFGLKADLSDYNWLIDVLSKSKQVKKAHAIFKEMKRNGRFVPDLKTYT 270

Query: 470 VIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNA 529
           V++   G    L     ++ EM++ G  P++V Y  +I+   K+     A+K++R+M+  
Sbjct: 271 VLMEGWGHEKDLLMLKSVYQEMLDAGIKPDVVAYGTLISSFCKSGKCDEAIKVFREMEAN 330

Query: 530 GFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDE-PVYGLLVDLWGKAGNVRK 588
           G  P    Y +++  LG    LDEA   F E+ + +  P E P    +V  + ++   + 
Sbjct: 331 GCMPSPHVYCMLINGLGSEERLDEALKYF-ELSKASGFPMEVPTCNAVVGAYCRSSKFQH 389

Query: 589 AWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
           A++  + M + G+ PN  T + +L   ++  ++ +AY++ Q M   G +P L TYT+++ 
Sbjct: 390 AFKMVDEMRKTGIGPNARTYDIILQYLIKSQKIEEAYNVFQRMGMEGCEPQLNTYTMMVG 449

Query: 649 C-CTEAR 654
             C+  R
Sbjct: 450 MFCSNER 456



 Score =  126 bits (316), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 83/336 (24%), Positives = 162/336 (48%), Gaps = 8/336 (2%)

Query: 289 RHFASTGNVVESVSRILRQWKWGPLAEEALGNTNYSMDAYQANQVLKQLQDHTVALGFFN 348
           R +A    V E+V    +   +G  A+  L + N+ +D    ++ +K+      A   F 
Sbjct: 203 RRYARARKVKEAVETFEKMSSFGLKAD--LSDYNWLIDVLSKSKQVKK------AHAIFK 254

Query: 349 WLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRA 408
            ++R   F  D  TYT ++   G  +    +  +  +M+  G +P+VV Y  LI S+ ++
Sbjct: 255 EMKRNGRFVPDLKTYTVLMEGWGHEKDLLMLKSVYQEMLDAGIKPDVVAYGTLISSFCKS 314

Query: 409 NYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTY 468
              +EA+ VF++M+  GC P    YC LI+       LD A+  ++  +A+G   +  T 
Sbjct: 315 GKCDEAIKVFREMEANGCMPSPHVYCMLINGLGSEERLDEALKYFELSKASGFPMEVPTC 374

Query: 469 SVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQN 528
           + ++    ++   Q A ++  EM   G  PN  TY+I++    K++  + A  +++ M  
Sbjct: 375 NAVVGAYCRSSKFQHAFKMVDEMRKTGIGPNARTYDIILQYLIKSQKIEEAYNVFQRMGM 434

Query: 529 AGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRK 588
            G EP   TY++++ +      +D A  V+ +M+ K  +P   ++  L++       + +
Sbjct: 435 EGCEPQLNTYTMMVGMFCSNERVDMALKVWKQMKEKGVLPCMHMFSSLINGLCFENRLEE 494

Query: 589 AWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDA 624
           A  +++ ML  G+RP     ++L  A +  G++S A
Sbjct: 495 ACVYFQEMLDKGIRPPGQLFSNLKEALIEGGRISLA 530



 Score =  123 bits (308), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 81/300 (27%), Positives = 145/300 (48%), Gaps = 3/300 (1%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDG-CQPNVVTYNRLIHSYGRANYLNE 413
           G K D   Y  ++ +L +++Q    + +  +M R+G   P++ TY  L+  +G    L  
Sbjct: 225 GLKADLSDYNWLIDVLSKSKQVKKAHAIFKEMKRNGRFVPDLKTYTVLMEGWGHEKDLLM 284

Query: 414 ALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIIN 473
              V+++M   G +PD V Y TLI    K+G  D A+ ++++M+A G  P    Y ++IN
Sbjct: 285 LKSVYQEMLDAGIKPDVVAYGTLISSFCKSGKCDEAIKVFREMEANGCMPSPHVYCMLIN 344

Query: 474 CLGKAGHLQAAHQLFCEMVNQGCIPNLV-TYNIMIALQAKARNYQSALKLYRDMQNAGFE 532
            LG    L  A + F E+      P  V T N ++    ++  +Q A K+  +M+  G  
Sbjct: 345 GLGSEERLDEALKYF-ELSKASGFPMEVPTCNAVVGAYCRSSKFQHAFKMVDEMRKTGIG 403

Query: 533 PDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEW 592
           P+  TY I+++ L     ++EA  VF  M  +   P    Y ++V ++     V  A + 
Sbjct: 404 PNARTYDIILQYLIKSQKIEEAYNVFQRMGMEGCEPQLNTYTMMVGMFCSNERVDMALKV 463

Query: 593 YEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTE 652
           ++ M + G+ P +   +SL++      +L +A    Q ML+ G++P  Q ++ L     E
Sbjct: 464 WKQMKEKGVLPCMHMFSSLINGLCFENRLEEACVYFQEMLDKGIRPPGQLFSNLKEALIE 523



 Score = 48.1 bits (113), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 30/136 (22%), Positives = 63/136 (46%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           R+ G   +  TY  ++  L ++++      +  +M  +GC+P + TY  ++  +     +
Sbjct: 398 RKTGIGPNARTYDIILQYLIKSQKIEEAYNVFQRMGMEGCEPQLNTYTMMVGMFCSNERV 457

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
           + AL V+KQM+  G  P    + +LI+       L+ A   +++M   G+ P    +S +
Sbjct: 458 DMALKVWKQMKEKGVLPCMHMFSSLINGLCFENRLEEACVYFQEMLDKGIRPPGQLFSNL 517

Query: 472 INCLGKAGHLQAAHQL 487
              L + G +  A  +
Sbjct: 518 KEALIEGGRISLAQDM 533



 Score = 41.2 bits (95), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 28/103 (27%), Positives = 45/103 (43%)

Query: 361 HTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQ 420
           +TYT MVG+     +     K+  QM   G  P +  ++ LI+     N L EA   F++
Sbjct: 442 NTYTMMVGMFCSNERVDMALKVWKQMKEKGVLPCMHMFSSLINGLCFENRLEEACVYFQE 501

Query: 421 MQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSP 463
           M   G  P    +  L +   + G + +A DM  K+     +P
Sbjct: 502 MLDKGIRPPGQLFSNLKEALIEGGRISLAQDMALKLDTLRKTP 544


>gi|255660816|gb|ACU25577.1| pentatricopeptide repeat-containing protein [Junellia seriphioides]
          Length = 418

 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 83/279 (29%), Positives = 151/279 (54%)

Query: 370 LGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPD 429
           L + + F  +    +  +  G   ++  +N L+H + +   +  A  VF  +   G  P 
Sbjct: 111 LMKLKYFKLVWGFYEDSLECGYPASLYFFNILMHRFCKEGEIKLAQSVFDAITKWGLRPT 170

Query: 430 RVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFC 489
            V++ TL++ + + G LD    +   MQA+G+ PD +TYSV+IN L K   +  A++LF 
Sbjct: 171 AVSFNTLMNGYIRLGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDYANELFN 230

Query: 490 EMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCG 549
           EM++ G +PN VT+  +I    K      A+++Y+ M +    PD +TY+ ++  L   G
Sbjct: 231 EMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKG 290

Query: 550 YLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCN 609
            L +A+ +  EM  K   PD+  Y  L+D   K G++  A+E+ + M++  +R +     
Sbjct: 291 DLKQAQDLIDEMSMKGLKPDKVTYTTLIDGSCKEGDLETAFEYRKRMIKENIRLDDVAYT 350

Query: 610 SLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
           +L+S   + G+  DA  +L+ ML++GLKP + TYT++++
Sbjct: 351 ALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIIN 389



 Score =  118 bits (296), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 73/227 (32%), Positives = 120/227 (52%)

Query: 381 KLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIH 440
           +L + M   G QP+V TY+ LI+   + + ++ A ++F +M   G  P+ VT+ TLID H
Sbjct: 192 RLKNAMQASGVQPDVYTYSVLINGLCKESKMDYANELFNEMLDNGLVPNGVTFTTLIDGH 251

Query: 441 AKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNL 500
            K G +D+AM++YK+M +  LSPD  TY+ +I  L K G L+ A  L  EM  +G  P+ 
Sbjct: 252 CKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDK 311

Query: 501 VTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAE 560
           VTY  +I    K  + ++A +  + M       D V Y+ ++  L   G   +AE +  E
Sbjct: 312 VTYTTLIDGSCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLRE 371

Query: 561 MRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPT 607
           M      P+   Y ++++ + K G+V    +  + M + G  P+V T
Sbjct: 372 MLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLMKEMQRDGYVPSVVT 418



 Score =  107 bits (266), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 81/303 (26%), Positives = 141/303 (46%), Gaps = 16/303 (5%)

Query: 271 FSKPSREMKIPAGLAPFS---RHFASTGNV--VESVSRILRQWKWGPLAEEALGNTNYSM 325
           F + S E   PA L  F+     F   G +   +SV   + +W   P A     + N  M
Sbjct: 123 FYEDSLECGYPASLYFFNILMHRFCKEGEIKLAQSVFDAITKWGLRPTAV----SFNTLM 178

Query: 326 DAYQANQVLKQLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQ 385
           + Y       +L D        N ++  +G + D +TY+ ++  L +  +    N+L ++
Sbjct: 179 NGYI------RLGDLDEGFRLKNAMQ-ASGVQPDVYTYSVLINGLCKESKMDYANELFNE 231

Query: 386 MVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGF 445
           M+ +G  PN VT+  LI  + +   ++ A++++KQM      PD +TY TLI    K G 
Sbjct: 232 MLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGD 291

Query: 446 LDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNI 505
           L  A D+  +M   GL PD  TY+ +I+   K G L+ A +    M+ +    + V Y  
Sbjct: 292 LKQAQDLIDEMSMKGLKPDKVTYTTLIDGSCKEGDLETAFEYRKRMIKENIRLDDVAYTA 351

Query: 506 MIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKN 565
           +I+   +      A K+ R+M + G +P+  TY++++      G +     +  EM+R  
Sbjct: 352 LISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLMKEMQRDG 411

Query: 566 WVP 568
           +VP
Sbjct: 412 YVP 414



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 48/176 (27%), Positives = 80/176 (45%), Gaps = 35/176 (19%)

Query: 362 TYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQM 421
           T+TT++    +  +     ++  QM+     P+++TYN LI+   +   L +A D+  +M
Sbjct: 243 TFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEM 302

Query: 422 QVVGCEPDRVTYCTLIDIHAKAGFLDVAMD------------------------------ 451
            + G +PD+VTY TLID   K G L+ A +                              
Sbjct: 303 SMKGLKPDKVTYTTLIDGSCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRS 362

Query: 452 -----MYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVT 502
                M ++M + GL P+  TY++IIN   K G +    +L  EM   G +P++VT
Sbjct: 363 VDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLMKEMQRDGYVPSVVT 418


>gi|75194072|sp|Q9S7R4.1|PP125_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g74900, mitochondrial; AltName: Full=Protein
           ORGANELLE TRANSCRIPT PROCESSING DEFECT 43; Flags:
           Precursor
 gi|5882733|gb|AAD55286.1|AC008263_17 Contains a PF|01535 DUF17 domain [Arabidopsis thaliana]
 gi|12323885|gb|AAG51911.1|AC013258_5 hypothetical protein; 69434-67986 [Arabidopsis thaliana]
          Length = 482

 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 100/331 (30%), Positives = 164/331 (49%), Gaps = 10/331 (3%)

Query: 330 ANQVLKQLQDH-TVALGFFNWL-RRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMV 387
            N VLK+L +H   AL FF++L      + HD  ++   + I  R      +  L+ +M 
Sbjct: 59  VNSVLKRLWNHGPKALQFFHFLDNHHREYVHDASSFDLAIDIAARLHLHPTVWSLIHRMR 118

Query: 388 RDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLD 447
                P+  T+  +   Y  A   ++A+ +F  M   GC  D  ++ T++D+  K+  ++
Sbjct: 119 SLRIGPSPKTFAIVAERYASAGKPDKAVKLFLNMHEHGCFQDLASFNTILDVLCKSKRVE 178

Query: 448 VAMDMYKKMQAAGLSPDTFTYSVIIN--CLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNI 505
            A ++++ ++    S DT TY+VI+N  CL K      A ++  EMV +G  PNL TYN 
Sbjct: 179 KAYELFRALRGR-FSVDTVTYNVILNGWCLIK--RTPKALEVLKEMVERGINPNLTTYNT 235

Query: 506 MIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKN 565
           M+    +A   + A + + +M+    E D VTY+ V+   G  G +  A  VF EM R+ 
Sbjct: 236 MLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIREG 295

Query: 566 WVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAY 625
            +P    Y  ++ +  K  NV  A   +E M++ G  PNV T N L+      G+ S   
Sbjct: 296 VLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGLFHAGEFSRGE 355

Query: 626 HLLQGMLNLGLKPSLQTYTLLL---SCCTEA 653
            L+Q M N G +P+ QTY +++   S C+E 
Sbjct: 356 ELMQRMENEGCEPNFQTYNMMIRYYSECSEV 386



 Score =  129 bits (325), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 77/299 (25%), Positives = 148/299 (49%), Gaps = 4/299 (1%)

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
           + G   D  ++ T++ +L ++++     +L  + +R     + VTYN +++ +       
Sbjct: 154 EHGCFQDLASFNTILDVLCKSKRVEKAYELF-RALRGRFSVDTVTYNVILNGWCLIKRTP 212

Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
           +AL+V K+M   G  P+  TY T++    +AG +  A + + +M+      D  TY+ ++
Sbjct: 213 KALEVLKEMVERGINPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVV 272

Query: 473 NCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFE 532
           +  G AG ++ A  +F EM+ +G +P++ TYN MI +  K  N ++A+ ++ +M   G+E
Sbjct: 273 HGFGVAGEIKRARNVFDEMIREGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRGYE 332

Query: 533 PDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEW 592
           P+  TY++++  L H G     E +   M  +   P+   Y +++  + +   V KA   
Sbjct: 333 PNVTTYNVLIRGLFHAGEFSRGEELMQRMENEGCEPNFQTYNMMIRYYSECSEVEKALGL 392

Query: 593 YEAMLQAGLRPNVPTCNSLLSAFL---RVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
           +E M      PN+ T N L+S      R   +  A  LL  M+  G  P   T+  +L+
Sbjct: 393 FEKMGSGDCLPNLDTYNILISGMFVRKRSEDMVVAGKLLLEMVERGFIPRKFTFNRVLN 451



 Score =  105 bits (263), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 71/253 (28%), Positives = 119/253 (47%), Gaps = 3/253 (1%)

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
           + G   +  TY TM+    RA Q     +   +M +  C+ +VVTY  ++H +G A  + 
Sbjct: 223 ERGINPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIK 282

Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
            A +VF +M   G  P   TY  +I +  K   ++ A+ M+++M   G  P+  TY+V+I
Sbjct: 283 RARNVFDEMIREGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLI 342

Query: 473 NCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFE 532
             L  AG      +L   M N+GC PN  TYN+MI   ++    + AL L+  M +    
Sbjct: 343 RGLFHAGEFSRGEELMQRMENEGCEPNFQTYNMMIRYYSECSEVEKALGLFEKMGSGDCL 402

Query: 533 PDKVTYSIV---MEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKA 589
           P+  TY+I+   M V      +  A  +  EM  + ++P +  +  +++     GN   A
Sbjct: 403 PNLDTYNILISGMFVRKRSEDMVVAGKLLLEMVERGFIPRKFTFNRVLNGLLLTGNQAFA 462

Query: 590 WEWYEAMLQAGLR 602
            E      ++G R
Sbjct: 463 KEILRLQSKSGSR 475


>gi|293330977|ref|NP_001169349.1| uncharacterized protein LOC100383216 [Zea mays]
 gi|30961817|gb|AAP37977.1| PPR2 [Zea mays]
 gi|224028857|gb|ACN33504.1| unknown [Zea mays]
 gi|414883415|tpg|DAA59429.1| TPA: pentatricopeptide repeat 2 [Zea mays]
          Length = 571

 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 87/294 (29%), Positives = 146/294 (49%), Gaps = 6/294 (2%)

Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLI 402
           AL  F  L+ Q  +   E TY  ++ +LGR+ Q    ++L D+M++ GCQP    Y  LI
Sbjct: 200 ALQVFEMLKEQPFYHPKEGTYMKLIVLLGRSGQPTRAHQLFDEMLQQGCQPTPELYTALI 259

Query: 403 HSYGRANYLNEALDVFKQMQVVG-CEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGL 461
            +Y R+  L+EAL +   M+    C+PD  TY T+I     A   D+   MYK M    +
Sbjct: 260 GAYCRSGLLDEALQLLNDMKSSPLCQPDVYTYSTIIKACIDAARFDLTDAMYKDMAERSI 319

Query: 462 SPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQ-GCIPNLVTYNIMIALQAKARNYQSAL 520
           SP+T T +++++  GKAG L    ++  +M++   C P++ T NI+++L       +   
Sbjct: 320 SPNTVTQNIVLSGYGKAGRLDDMERVLSDMLDSVSCKPDVWTMNIILSLFGNRGEVELME 379

Query: 521 KLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLW 580
           + Y   +  G EP+  T +I++   G     D+  AV   MR+  +      Y  +++ +
Sbjct: 380 RWYEKFRGYGVEPETRTLNILIGAYGKRRMYDKMSAVMEHMRKLAFPWTTATYNNVIEAF 439

Query: 581 GKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNL 634
            +AG+       +  M   G+RP+  T   L+  F R GQ    +H + GM+ L
Sbjct: 440 AEAGDAGNMEHAFNQMRSEGMRPDTKTFCCLIDGFSRAGQ----FHKVVGMVKL 489



 Score = 92.0 bits (227), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 65/245 (26%), Positives = 108/245 (44%), Gaps = 3/245 (1%)

Query: 412 NEALDVFKQMQVVGC-EPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSV 470
            EAL VF+ ++      P   TY  LI +  ++G    A  ++ +M   G  P    Y+ 
Sbjct: 198 QEALQVFEMLKEQPFYHPKEGTYMKLIVLLGRSGQPTRAHQLFDEMLQQGCQPTPELYTA 257

Query: 471 IINCLGKAGHLQAAHQLFCEMVNQG-CIPNLVTYNIMIALQAKARNYQSALKLYRDMQNA 529
           +I    ++G L  A QL  +M +   C P++ TY+ +I     A  +     +Y+DM   
Sbjct: 258 LIGAYCRSGLLDEALQLLNDMKSSPLCQPDVYTYSTIIKACIDAARFDLTDAMYKDMAER 317

Query: 530 GFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRK-NWVPDEPVYGLLVDLWGKAGNVRK 588
              P+ VT +IV+   G  G LD+ E V ++M    +  PD     +++ L+G  G V  
Sbjct: 318 SISPNTVTQNIVLSGYGKAGRLDDMERVLSDMLDSVSCKPDVWTMNIILSLFGNRGEVEL 377

Query: 589 AWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
              WYE     G+ P   T N L+ A+ +         +++ M  L    +  TY  ++ 
Sbjct: 378 MERWYEKFRGYGVEPETRTLNILIGAYGKRRMYDKMSAVMEHMRKLAFPWTTATYNNVIE 437

Query: 649 CCTEA 653
              EA
Sbjct: 438 AFAEA 442



 Score = 70.9 bits (172), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 48/205 (23%), Positives = 95/205 (46%), Gaps = 2/205 (0%)

Query: 357 KHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALD 416
           K D  T   ++ + G   +   + +  ++    G +P   T N LI +YG+    ++   
Sbjct: 356 KPDVWTMNIILSLFGNRGEVELMERWYEKFRGYGVEPETRTLNILIGAYGKRRMYDKMSA 415

Query: 417 VFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLG 476
           V + M+ +       TY  +I+  A+AG        + +M++ G+ PDT T+  +I+   
Sbjct: 416 VMEHMRKLAFPWTTATYNNVIEAFAEAGDAGNMEHAFNQMRSEGMRPDTKTFCCLIDGFS 475

Query: 477 KAGHLQAAHQLFCEMVNQGCIP-NLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDK 535
           +AG       +  ++  +  +P N   +N ++   A+A +     +++R M++   EPD 
Sbjct: 476 RAGQFHKVVGMV-KLAERLDVPVNTPFHNAVLGACARADDLVEMERVFRRMKHTQCEPDA 534

Query: 536 VTYSIVMEVLGHCGYLDEAEAVFAE 560
            TYSI++E     G  D+  A+  E
Sbjct: 535 STYSILVEAYRKEGMTDKIYALHQE 559



 Score = 69.7 bits (169), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 37/156 (23%), Positives = 72/156 (46%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           R  G + +  T   ++G  G+ R +  ++ +++ M +        TYN +I ++  A   
Sbjct: 386 RGYGVEPETRTLNILIGAYGKRRMYDKMSAVMEHMRKLAFPWTTATYNNVIEAFAEAGDA 445

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
                 F QM+  G  PD  T+C LID  ++AG     + M K  +   +  +T  ++ +
Sbjct: 446 GNMEHAFNQMRSEGMRPDTKTFCCLIDGFSRAGQFHKVVGMVKLAERLDVPVNTPFHNAV 505

Query: 472 INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMI 507
           +    +A  L    ++F  M +  C P+  TY+I++
Sbjct: 506 LGACARADDLVEMERVFRRMKHTQCEPDASTYSILV 541



 Score = 53.1 bits (126), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 34/120 (28%), Positives = 58/120 (48%), Gaps = 3/120 (2%)

Query: 347 FNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYG 406
           FN +R + G + D  T+  ++    RA QF  +  ++    R     N   +N ++ +  
Sbjct: 452 FNQMRSE-GMRPDTKTFCCLIDGFSRAGQFHKVVGMVKLAERLDVPVNTPFHNAVLGACA 510

Query: 407 RANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTF 466
           RA+ L E   VF++M+   CEPD  TY  L++ + K G  D    ++++  A  L P  F
Sbjct: 511 RADDLVEMERVFRRMKHTQCEPDASTYSILVEAYRKEGMTDKIYALHQENPA--LVPADF 568


>gi|414591138|tpg|DAA41709.1| TPA: hypothetical protein ZEAMMB73_028111 [Zea mays]
          Length = 583

 Score =  148 bits (373), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 92/314 (29%), Positives = 150/314 (47%), Gaps = 1/314 (0%)

Query: 334 LKQLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQP 393
           L   +D +     FN ++       D + YT ++    RA       K+LD+ V +G +P
Sbjct: 257 LSTARDISKVEALFNEMKAN-NVVGDVYLYTAVINAYCRAGNMRRAAKVLDECVGNGVEP 315

Query: 394 NVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMY 453
           N  TY  LI+ + +   +  A  +   MQ  G   +++ + T+ID + + G +D A+ + 
Sbjct: 316 NERTYGVLINGFCKIGQMEAAEMLLADMQGQGVGLNQIIFNTMIDGYCRKGMVDDALKIK 375

Query: 454 KKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKA 513
             M+  G+  D +TY+ +   L +   L  A  L   M+  G +PN VTY  +I++  K 
Sbjct: 376 AAMEKMGVELDIYTYNTLACGLCRVNRLDEAKTLLHIMIEMGVVPNYVTYTTLISIHCKD 435

Query: 514 RNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVY 573
            +   A +L+R+M   G  P  VTY+++++     G + EAE    EM +K +VPD   Y
Sbjct: 436 GDMVEARRLFREMAEKGATPSVVTYNVMIDGYTKKGSIREAERFRKEMEKKGFVPDVYTY 495

Query: 574 GLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLN 633
             LV      G V  A + +E M Q G  PNV    +L+S   + G+   A+ L   ML 
Sbjct: 496 ASLVHGHCVNGKVDVALKLFEEMKQRGTEPNVVAYTALISGLAKEGRSEAAFQLYDDMLK 555

Query: 634 LGLKPSLQTYTLLL 647
            GL P    Y+ L+
Sbjct: 556 AGLIPDDSLYSALV 569



 Score =  118 bits (295), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 83/304 (27%), Positives = 140/304 (46%), Gaps = 5/304 (1%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           G +    TYT +V  L  AR    +  L ++M  +    +V  Y  +I++Y RA  +  A
Sbjct: 242 GIEATVGTYTILVDSLSTARDISKVEALFNEMKANNVVGDVYLYTAVINAYCRAGNMRRA 301

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
             V  +    G EP+  TY  LI+   K G ++ A  +   MQ  G+  +   ++ +I+ 
Sbjct: 302 AKVLDECVGNGVEPNERTYGVLINGFCKIGQMEAAEMLLADMQGQGVGLNQIIFNTMIDG 361

Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPD 534
             + G +  A ++   M   G   ++ TYN +     +      A  L   M   G  P+
Sbjct: 362 YCRKGMVDDALKIKAAMEKMGVELDIYTYNTLACGLCRVNRLDEAKTLLHIMIEMGVVPN 421

Query: 535 KVTYSIVMEVLGHC--GYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEW 592
            VTY+ ++ +  HC  G + EA  +F EM  K   P    Y +++D + K G++R+A  +
Sbjct: 422 YVTYTTLISI--HCKDGDMVEARRLFREMAEKGATPSVVTYNVMIDGYTKKGSIREAERF 479

Query: 593 YEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS-CCT 651
            + M + G  P+V T  SL+      G++  A  L + M   G +P++  YT L+S    
Sbjct: 480 RKEMEKKGFVPDVYTYASLVHGHCVNGKVDVALKLFEEMKQRGTEPNVVAYTALISGLAK 539

Query: 652 EARS 655
           E RS
Sbjct: 540 EGRS 543



 Score =  116 bits (291), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 88/341 (25%), Positives = 152/341 (44%), Gaps = 10/341 (2%)

Query: 313 LAEEALGNTNYSMDAYQANQVLKQLQDHTVALGFFNWLRR------QAGFKHDEHTYTTM 366
           L E ALG+   S+    A+ V+    D     G  +  RR      + G   +   Y ++
Sbjct: 163 LLERALGSCPGSVSPLAASVVV----DGLCKSGRVDDARRLLDDMPRHGVSLNALCYNSL 218

Query: 367 VGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGC 426
           +    R +  G + ++L+ M  +G +  V TY  L+ S   A  +++   +F +M+    
Sbjct: 219 LDCYVRQKDDGRVQEILEIMENEGIEATVGTYTILVDSLSTARDISKVEALFNEMKANNV 278

Query: 427 EPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQ 486
             D   Y  +I+ + +AG +  A  +  +    G+ P+  TY V+IN   K G ++AA  
Sbjct: 279 VGDVYLYTAVINAYCRAGNMRRAAKVLDECVGNGVEPNERTYGVLINGFCKIGQMEAAEM 338

Query: 487 LFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLG 546
           L  +M  QG   N + +N MI    +      ALK+   M+  G E D  TY+ +   L 
Sbjct: 339 LLADMQGQGVGLNQIIFNTMIDGYCRKGMVDDALKIKAAMEKMGVELDIYTYNTLACGLC 398

Query: 547 HCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVP 606
               LDEA+ +   M     VP+   Y  L+ +  K G++ +A   +  M + G  P+V 
Sbjct: 399 RVNRLDEAKTLLHIMIEMGVVPNYVTYTTLISIHCKDGDMVEARRLFREMAEKGATPSVV 458

Query: 607 TCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
           T N ++  + + G + +A    + M   G  P + TY  L+
Sbjct: 459 TYNVMIDGYTKKGSIREAERFRKEMEKKGFVPDVYTYASLV 499



 Score =  107 bits (267), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 88/366 (24%), Positives = 158/366 (43%), Gaps = 4/366 (1%)

Query: 381 KLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIH 440
           +LLD M R G   N + YN L+  Y R        ++ + M+  G E    TY  L+D  
Sbjct: 198 RLLDDMPRHGVSLNALCYNSLLDCYVRQKDDGRVQEILEIMENEGIEATVGTYTILVDSL 257

Query: 441 AKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNL 500
           + A  +     ++ +M+A  +  D + Y+ +IN   +AG+++ A ++  E V  G  PN 
Sbjct: 258 STARDISKVEALFNEMKANNVVGDVYLYTAVINAYCRAGNMRRAAKVLDECVGNGVEPNE 317

Query: 501 VTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHC--GYLDEAEAVF 558
            TY ++I    K    ++A  L  DMQ  G   +++ ++ +++  G+C  G +D+A  + 
Sbjct: 318 RTYGVLINGFCKIGQMEAAEMLLADMQGQGVGLNQIIFNTMID--GYCRKGMVDDALKIK 375

Query: 559 AEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRV 618
           A M +     D   Y  L     +   + +A      M++ G+ PN  T  +L+S   + 
Sbjct: 376 AAMEKMGVELDIYTYNTLACGLCRVNRLDEAKTLLHIMIEMGVVPNYVTYTTLISIHCKD 435

Query: 619 GQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGFCHELMAVSGHPAHMFLL 678
           G + +A  L + M   G  PS+ TY +++   T+  S  +     + M   G    ++  
Sbjct: 436 GDMVEARRLFREMAEKGATPSVVTYNVMIDGYTKKGSIREAERFRKEMEKKGFVPDVYTY 495

Query: 679 SMPSPGPDGQNVRDHVGSFLEMMHSEDRESKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQ 738
           +    G       D      E M     E       A++  L K G  E A  +++   +
Sbjct: 496 ASLVHGHCVNGKVDVALKLFEEMKQRGTEPNVVAYTALISGLAKEGRSEAAFQLYDDMLK 555

Query: 739 KNVYPD 744
             + PD
Sbjct: 556 AGLIPD 561



 Score = 92.4 bits (228), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 56/242 (23%), Positives = 119/242 (49%)

Query: 407 RANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTF 466
           ++  +++A  +   M   G   + + Y +L+D + +        ++ + M+  G+     
Sbjct: 189 KSGRVDDARRLLDDMPRHGVSLNALCYNSLLDCYVRQKDDGRVQEILEIMENEGIEATVG 248

Query: 467 TYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDM 526
           TY+++++ L  A  +     LF EM     + ++  Y  +I    +A N + A K+  + 
Sbjct: 249 TYTILVDSLSTARDISKVEALFNEMKANNVVGDVYLYTAVINAYCRAGNMRRAAKVLDEC 308

Query: 527 QNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNV 586
              G EP++ TY +++      G ++ AE + A+M+ +    ++ ++  ++D + + G V
Sbjct: 309 VGNGVEPNERTYGVLINGFCKIGQMEAAEMLLADMQGQGVGLNQIIFNTMIDGYCRKGMV 368

Query: 587 RKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLL 646
             A +   AM + G+  ++ T N+L     RV +L +A  LL  M+ +G+ P+  TYT L
Sbjct: 369 DDALKIKAAMEKMGVELDIYTYNTLACGLCRVNRLDEAKTLLHIMIEMGVVPNYVTYTTL 428

Query: 647 LS 648
           +S
Sbjct: 429 IS 430



 Score = 84.3 bits (207), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 74/320 (23%), Positives = 142/320 (44%), Gaps = 10/320 (3%)

Query: 469 SVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQN 528
           SV+++ L K+G +  A +L  +M   G   N + YN ++    + ++     ++   M+N
Sbjct: 181 SVVVDGLCKSGRVDDARRLLDDMPRHGVSLNALCYNSLLDCYVRQKDDGRVQEILEIMEN 240

Query: 529 AGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRK 588
            G E    TY+I+++ L     + + EA+F EM+  N V D  +Y  +++ + +AGN+R+
Sbjct: 241 EGIEATVGTYTILVDSLSTARDISKVEALFNEMKANNVVGDVYLYTAVINAYCRAGNMRR 300

Query: 589 AWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
           A +  +  +  G+ PN  T   L++ F ++GQ+  A  LL  M   G+  +   +  ++ 
Sbjct: 301 AAKVLDECVGNGVEPNERTYGVLINGFCKIGQMEAAEMLLADMQGQGVGLNQIIFNTMID 360

Query: 649 CCTEARSPYDMGFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRES 708
                    D       M   G    ++  +  + G    N  D   + L +M       
Sbjct: 361 GYCRKGMVDDALKIKAAMEKMGVELDIYTYNTLACGLCRVNRLDEAKTLLHIM------I 414

Query: 709 KRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAVKEKGMSYWLINLHVMSDGTAVI 768
           + G+V   V +     +  + G + E    + ++ + + EKG +  ++  +VM DG    
Sbjct: 415 EMGVVPNYVTYTTLISIHCKDGDMVEA---RRLFRE-MAEKGATPSVVTYNVMIDGYTKK 470

Query: 769 ALSRTLAWFRKQMLISGVGP 788
              R    FRK+M   G  P
Sbjct: 471 GSIREAERFRKEMEKKGFVP 490



 Score = 62.8 bits (151), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 36/114 (31%), Positives = 55/114 (48%)

Query: 362 TYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQM 421
           TY  M+    +        +   +M + G  P+V TY  L+H +     ++ AL +F++M
Sbjct: 459 TYNVMIDGYTKKGSIREAERFRKEMEKKGFVPDVYTYASLVHGHCVNGKVDVALKLFEEM 518

Query: 422 QVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCL 475
           +  G EP+ V Y  LI   AK G  + A  +Y  M  AGL PD   YS ++  L
Sbjct: 519 KQRGTEPNVVAYTALISGLAKEGRSEAAFQLYDDMLKAGLIPDDSLYSALVGSL 572


>gi|15238562|ref|NP_200798.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75171023|sp|Q9FJE6.1|PP437_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At5g59900
 gi|9757911|dbj|BAB08358.1| unnamed protein product [Arabidopsis thaliana]
 gi|332009866|gb|AED97249.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 907

 Score =  148 bits (373), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 103/393 (26%), Positives = 180/393 (45%), Gaps = 4/393 (1%)

Query: 356 FKHDEHTYTTMV-GILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           F   E   +++V G+  R +   A+N L+ ++V  G  PN+  YN LI S  +    +EA
Sbjct: 328 FSPSEAAVSSLVEGLRKRGKIEEALN-LVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEA 386

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
             +F +M  +G  P+ VTY  LID+  + G LD A+    +M   GL    + Y+ +IN 
Sbjct: 387 ELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLING 446

Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPD 534
             K G + AA     EM+N+   P +VTY  ++           AL+LY +M   G  P 
Sbjct: 447 HCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPS 506

Query: 535 KVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYE 594
             T++ ++  L   G + +A  +F EM   N  P+   Y ++++ + + G++ KA+E+ +
Sbjct: 507 IYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLK 566

Query: 595 AMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYT-LLLSCCTEA 653
            M + G+ P+  +   L+      GQ S+A   + G+     + +   YT LL   C E 
Sbjct: 567 EMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREG 626

Query: 654 RSPYDMGFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRESKRGLV 713
           +    +  C E M   G    +    +   G      R      L+ MH    +    + 
Sbjct: 627 KLEEALSVCQE-MVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIY 685

Query: 714 DAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAV 746
            +++D   K+G  +EA  +W++   +   P+ V
Sbjct: 686 TSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEV 718



 Score =  140 bits (353), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 118/462 (25%), Positives = 184/462 (39%), Gaps = 64/462 (13%)

Query: 334 LKQLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQP 393
           L + +   +A+  FN +    G + D + YT ++  L   +      +++  M   GC  
Sbjct: 202 LVKFRHFGLAMELFNDMV-SVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEATGCDV 260

Query: 394 NVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMY 453
           N+V YN LI    +   + EA+ + K +     +PD VTYCTL+    K    ++ ++M 
Sbjct: 261 NIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMM 320

Query: 454 KKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKA 513
            +M     SP     S ++  L K G ++ A  L   +V+ G  PNL  YN +I    K 
Sbjct: 321 DEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKG 380

Query: 514 RNYQSALKLYRDMQNAGFEPDKVTYSIVMEVL---------------------------- 545
           R +  A  L+  M   G  P+ VTYSI++++                             
Sbjct: 381 RKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPY 440

Query: 546 -----GHCGYLD--EAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQ 598
                GHC + D   AE   AEM  K   P    Y  L+  +   G + KA   Y  M  
Sbjct: 441 NSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTG 500

Query: 599 AGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYD 658
            G+ P++ T  +LLS   R G + DA  L   M    +KP+  TY +++           
Sbjct: 501 KGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIE---------- 550

Query: 659 MGFCHELMAVSGHPAHMFLLSMPSPG--PDGQNVRDHVGS------------FLEMMHSE 704
            G+C E        A  FL  M   G  PD  + R  +              F++ +H  
Sbjct: 551 -GYCEE---GDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKG 606

Query: 705 DRESKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAV 746
           + E        ++    + G  EEA SV +   Q+ V  D V
Sbjct: 607 NCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLV 648



 Score =  123 bits (308), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 89/323 (27%), Positives = 146/323 (45%), Gaps = 9/323 (2%)

Query: 347 FNWLRR--QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHS 404
           F +L+   + G   D ++Y  ++  L    Q       +D + +  C+ N + Y  L+H 
Sbjct: 562 FEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHG 621

Query: 405 YGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPD 464
           + R   L EAL V ++M   G + D V Y  LID   K     +   + K+M   GL PD
Sbjct: 622 FCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPD 681

Query: 465 TFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYR 524
              Y+ +I+   K G  + A  ++  M+N+GC+PN VTY  +I    KA     A  L  
Sbjct: 682 DVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCS 741

Query: 525 DMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAV-FAEMRRKNWVPDEPVYGLLVDLWGKA 583
            MQ     P++VTY   +++L   G +D  +AV       K  + +   Y +L+  + + 
Sbjct: 742 KMQPVSSVPNQVTYGCFLDILTK-GEVDMQKAVELHNAILKGLLANTATYNMLIRGFCRQ 800

Query: 584 GNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTY 643
           G + +A E    M+  G+ P+  T  ++++   R   +  A  L   M   G++P    Y
Sbjct: 801 GRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSMTEKGIRPDRVAY 860

Query: 644 -TLLLSCCTEARSPYDMGFCHEL 665
            TL+  CC       +MG   EL
Sbjct: 861 NTLIHGCCVAG----EMGKATEL 879



 Score =  119 bits (297), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 92/400 (23%), Positives = 177/400 (44%), Gaps = 2/400 (0%)

Query: 347 FNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYG 406
           F  +  +     +  T + ++  L + R FG   +L + MV  G +P+V  Y  +I S  
Sbjct: 179 FKMMITKVSLLPEVRTLSALLHGLVKFRHFGLAMELFNDMVSVGIRPDVYIYTGVIRSLC 238

Query: 407 RANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTF 466
               L+ A ++   M+  GC+ + V Y  LID   K   +  A+ + K +    L PD  
Sbjct: 239 ELKDLSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVV 298

Query: 467 TYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDM 526
           TY  ++  L K    +   ++  EM+     P+    + ++    K    + AL L + +
Sbjct: 299 TYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRV 358

Query: 527 QNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNV 586
            + G  P+   Y+ +++ L       EAE +F  M +    P++  Y +L+D++ + G +
Sbjct: 359 VDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKL 418

Query: 587 RKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLL 646
             A  +   M+  GL+ +V   NSL++   + G +S A   +  M+N  L+P++ TYT L
Sbjct: 419 DTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSL 478

Query: 647 L-SCCTEARSPYDMGFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSED 705
           +   C++ +    +   HE+      P+     ++ S       +RD V  F EM    +
Sbjct: 479 MGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEW-N 537

Query: 706 RESKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDA 745
            +  R   + +++   + G   +A    +   +K + PD 
Sbjct: 538 VKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDT 577



 Score =  114 bits (284), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 74/295 (25%), Positives = 142/295 (48%)

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
           + G + ++ TY+ ++ +  R  +       L +MV  G + +V  YN LI+ + +   ++
Sbjct: 395 KIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDIS 454

Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
            A     +M     EP  VTY +L+  +   G ++ A+ +Y +M   G++P  +T++ ++
Sbjct: 455 AAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLL 514

Query: 473 NCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFE 532
           + L +AG ++ A +LF EM      PN VTYN+MI    +  +   A +  ++M   G  
Sbjct: 515 SGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIV 574

Query: 533 PDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEW 592
           PD  +Y  ++  L   G   EA+     + + N   +E  Y  L+  + + G + +A   
Sbjct: 575 PDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSV 634

Query: 593 YEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
            + M+Q G+  ++     L+   L+       + LL+ M + GLKP    YT ++
Sbjct: 635 CQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMI 689



 Score =  113 bits (282), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 67/231 (29%), Positives = 115/231 (49%), Gaps = 12/231 (5%)

Query: 346 FFNWLRRQ--AGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIH 403
           FF  L+     G K D+  YT+M+    +   F     + D M+ +GC PN VTY  +I+
Sbjct: 666 FFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVIN 725

Query: 404 SYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQA----- 458
              +A ++NEA  +  +MQ V   P++VTY   +DI  K       +DM K ++      
Sbjct: 726 GLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKG-----EVDMQKAVELHNAIL 780

Query: 459 AGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQS 518
            GL  +T TY+++I    + G ++ A +L   M+  G  P+ +TY  MI    +  + + 
Sbjct: 781 KGLLANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKK 840

Query: 519 ALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPD 569
           A++L+  M   G  PD+V Y+ ++      G + +A  +  EM R+  +P+
Sbjct: 841 AIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLIPN 891



 Score = 95.1 bits (235), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 68/227 (29%), Positives = 106/227 (46%), Gaps = 2/227 (0%)

Query: 382 LLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHA 441
           LL +M   G +P+ V Y  +I +  +     EA  ++  M   GC P+ VTY  +I+   
Sbjct: 669 LLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLC 728

Query: 442 KAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAG-HLQAAHQLFCEMVNQGCIPNL 500
           KAGF++ A  +  KMQ     P+  TY   ++ L K    +Q A +L    + +G + N 
Sbjct: 729 KAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVELH-NAILKGLLANT 787

Query: 501 VTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAE 560
            TYN++I    +    + A +L   M   G  PD +TY+ ++  L     + +A  ++  
Sbjct: 788 ATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNS 847

Query: 561 MRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPT 607
           M  K   PD   Y  L+     AG + KA E    ML+ GL PN  T
Sbjct: 848 MTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLIPNNKT 894



 Score = 77.0 bits (188), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 81/381 (21%), Positives = 160/381 (41%), Gaps = 19/381 (4%)

Query: 291 FASTGNVVESVSRILRQWKWGPLAEEALGNTNYSMDAYQANQVLKQLQDHTVALGFFNWL 350
            A     V++V RI+R  +   +A  +   +      +    ++  + D  + L FFN+L
Sbjct: 35  IAEDKQFVDAVKRIVRGKRSWEIALSSELVSRRLKTVHVEEILIGTIDDPKLGLRFFNFL 94

Query: 351 RRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANY 410
               GF H   ++  ++  L +A  F   + LL  ++    +P+ V +N L   Y +   
Sbjct: 95  GLHRGFDHSTASFCILIHALVKANLFWPASSLLQTLLLRALKPSDV-FNVLFSCYEKCKL 153

Query: 411 LNEA-LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYS 469
            + +  D+  Q  V      RV              LD  +     +    L P+  T S
Sbjct: 154 SSSSSFDLLIQHYV---RSRRV--------------LDGVLVFKMMITKVSLLPEVRTLS 196

Query: 470 VIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNA 529
            +++ L K  H   A +LF +MV+ G  P++  Y  +I    + ++   A ++   M+  
Sbjct: 197 ALLHGLVKFRHFGLAMELFNDMVSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEAT 256

Query: 530 GFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKA 589
           G + + V Y+++++ L     + EA  +  ++  K+  PD   Y  LV    K       
Sbjct: 257 GCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIG 316

Query: 590 WEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSC 649
            E  + ML     P+    +SL+    + G++ +A +L++ +++ G+ P+L  Y  L+  
Sbjct: 317 LEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDS 376

Query: 650 CTEARSPYDMGFCHELMAVSG 670
             + R  ++     + M   G
Sbjct: 377 LCKGRKFHEAELLFDRMGKIG 397



 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 33/113 (29%), Positives = 57/113 (50%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           G   +  TY  ++    R  +    ++L+ +M+ DG  P+ +TY  +I+   R N + +A
Sbjct: 782 GLLANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKA 841

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFT 467
           ++++  M   G  PDRV Y TLI     AG +  A ++  +M   GL P+  T
Sbjct: 842 IELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLIPNNKT 894


>gi|449462136|ref|XP_004148797.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g48810-like [Cucumis sativus]
          Length = 660

 Score =  148 bits (373), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 93/295 (31%), Positives = 155/295 (52%), Gaps = 3/295 (1%)

Query: 355 GFKHDEHTYTTMV-GILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNE 413
           G   + HT+T ++ G   R + + A++ L   M++DGC+PNVV YN LIH       L E
Sbjct: 309 GCDANIHTFTPLIKGCFMRGKLYEALD-LWKLMIQDGCEPNVVAYNTLIHGLCSNGSLEE 367

Query: 414 ALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIIN 473
           AL V  QMQ  GC P+  TY  LID  AK+G L  A + + +M + G  P+  TY+ +++
Sbjct: 368 ALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASETWNRMISHGCRPNVVTYTCMVD 427

Query: 474 CLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEP 533
            L K      A+ L  +M  +GC PN +T+N  I         + A+KL   MQ  G  P
Sbjct: 428 VLCKNSMFDQANSLVEKMTLEGCTPNTMTFNTFIKGLCGNGRVEWAMKLLERMQGHGCLP 487

Query: 534 DKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWY 593
           +  TY+ +++ L      +EA  +F E+  +N  P+   Y  ++  + +AG + +A + +
Sbjct: 488 NITTYNELLDALFRMNKYEEAFGLFQEIEARNLQPNLVTYNTVLYGFSRAGMMGEALQLF 547

Query: 594 EAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLG-LKPSLQTYTLLL 647
              L  G  P+  T N+++ A+ + G++  A  L++ + ++    P + TYT L+
Sbjct: 548 GKALVRGTAPDSITYNTMIHAYCKQGKVKIAAQLVERVSSMKEWHPDIITYTSLI 602



 Score =  145 bits (366), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 97/352 (27%), Positives = 164/352 (46%), Gaps = 33/352 (9%)

Query: 329 QANQVLKQLQ---DHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQ 385
           Q + VLK+L+   + +  LGFF+ +     F+H   TY  M+  LGR  +   +  +L Q
Sbjct: 40  QESDVLKRLKTDRNLSSVLGFFSAIANSNAFQHTASTYRVMIERLGRECEMDMVQYILQQ 99

Query: 386 MVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGF 445
           M  DG       +  +I+ Y R     +AL +F ++   GC+P    Y  L+D       
Sbjct: 100 MKMDGINCCEDLFICIINGYKRVGSAEQALKMFYRIGEFGCKPTVRIYNHLLDALLSENK 159

Query: 446 LDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNI 505
             +   +Y  M+  GL P+ FTY++++  L K   + AAH+LF EM N+GC P+ VTY  
Sbjct: 160 FQMINPLYTNMKKDGLIPNVFTYNILLKALCKNDRVDAAHKLFVEMSNKGCPPDAVTYTT 219

Query: 506 MIALQAKARN------------------------------YQSALKLYRDMQNAGFEPDK 535
           M++   KA                                 + A+KL  +M + G +P+ 
Sbjct: 220 MVSSLCKAGKIDDARELAGRFKPSVPVYNALIDGMCKEGRIEVAIKLLGEMMDNGVDPNV 279

Query: 536 VTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEA 595
           V+YS ++  L   G ++ A A+FA+M  +    +   +  L+      G + +A + ++ 
Sbjct: 280 VSYSCIINSLCVSGNVELAFALFAQMFLRGCDANIHTFTPLIKGCFMRGKLYEALDLWKL 339

Query: 596 MLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
           M+Q G  PNV   N+L+      G L +A  +   M   G  P++ TY++L+
Sbjct: 340 MIQDGCEPNVVAYNTLIHGLCSNGSLEEALQVCDQMQRSGCLPNVTTYSILI 391



 Score =  135 bits (341), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 91/300 (30%), Positives = 152/300 (50%), Gaps = 5/300 (1%)

Query: 351 RRQAG-FKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRAN 409
           R  AG FK     Y  ++  + +  +     KLL +M+ +G  PNVV+Y+ +I+S   + 
Sbjct: 234 RELAGRFKPSVPVYNALIDGMCKEGRIEVAIKLLGEMMDNGVDPNVVSYSCIINSLCVSG 293

Query: 410 YLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYS 469
            +  A  +F QM + GC+ +  T+  LI      G L  A+D++K M   G  P+   Y+
Sbjct: 294 NVELAFALFAQMFLRGCDANIHTFTPLIKGCFMRGKLYEALDLWKLMIQDGCEPNVVAYN 353

Query: 470 VIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNA 529
            +I+ L   G L+ A Q+  +M   GC+PN+ TY+I+I   AK+ +   A + +  M + 
Sbjct: 354 TLIHGLCSNGSLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASETWNRMISH 413

Query: 530 GFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKA 589
           G  P+ VTY+ +++VL      D+A ++  +M  +   P+   +   +   G  GN R  
Sbjct: 414 GCRPNVVTYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTMTFNTFIK--GLCGNGRVE 471

Query: 590 W--EWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
           W  +  E M   G  PN+ T N LL A  R+ +  +A+ L Q +    L+P+L TY  +L
Sbjct: 472 WAMKLLERMQGHGCLPNITTYNELLDALFRMNKYEEAFGLFQEIEARNLQPNLVTYNTVL 531



 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 83/274 (30%), Positives = 136/274 (49%), Gaps = 1/274 (0%)

Query: 382 LLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHA 441
           L  QM   GC  N+ T+  LI        L EALD++K M   GCEP+ V Y TLI    
Sbjct: 301 LFAQMFLRGCDANIHTFTPLIKGCFMRGKLYEALDLWKLMIQDGCEPNVVAYNTLIHGLC 360

Query: 442 KAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLV 501
             G L+ A+ +  +MQ +G  P+  TYS++I+   K+G L  A + +  M++ GC PN+V
Sbjct: 361 SNGSLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASETWNRMISHGCRPNVV 420

Query: 502 TYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEM 561
           TY  M+ +  K   +  A  L   M   G  P+ +T++  ++ L   G ++ A  +   M
Sbjct: 421 TYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTMTFNTFIKGLCGNGRVEWAMKLLERM 480

Query: 562 RRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQL 621
           +    +P+   Y  L+D   +     +A+  ++ +    L+PN+ T N++L  F R G +
Sbjct: 481 QGHGCLPNITTYNELLDALFRMNKYEEAFGLFQEIEARNLQPNLVTYNTVLYGFSRAGMM 540

Query: 622 SDAYHLLQGMLNLGLKPSLQTY-TLLLSCCTEAR 654
            +A  L    L  G  P   TY T++ + C + +
Sbjct: 541 GEALQLFGKALVRGTAPDSITYNTMIHAYCKQGK 574



 Score = 78.6 bits (192), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 54/213 (25%), Positives = 96/213 (45%), Gaps = 38/213 (17%)

Query: 355 GFKHDEHTYTTMV-GILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNE 413
           G   +  T+ T + G+ G  R   A+ KLL++M   GC PN+ TYN L+ +  R N   E
Sbjct: 449 GCTPNTMTFNTFIKGLCGNGRVEWAM-KLLERMQGHGCLPNITTYNELLDALFRMNKYEE 507

Query: 414 ALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIIN 473
           A  +F++++    +P+ VTY T++   ++AG +  A+ ++ K    G +PD+ TY+ +I+
Sbjct: 508 AFGLFQEIEARNLQPNLVTYNTVLYGFSRAGMMGEALQLFGKALVRGTAPDSITYNTMIH 567

Query: 474 CLGKAGHLQAAHQLF-----------------------C-------------EMVNQGCI 497
              K G ++ A QL                        C             + +NQG  
Sbjct: 568 AYCKQGKVKIAAQLVERVSSMKEWHPDIITYTSLIWGACNWMNIEEAMAFLDKAINQGIC 627

Query: 498 PNLVTYNIMIALQAKARNYQSALKLYRDMQNAG 530
           PN  T+N ++     +  +   + +  D+   G
Sbjct: 628 PNFATWNALVRCFFDSLGHMGPIHILDDILRKG 660


>gi|296085006|emb|CBI28421.3| unnamed protein product [Vitis vinifera]
          Length = 740

 Score =  148 bits (373), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 86/258 (33%), Positives = 136/258 (52%), Gaps = 8/258 (3%)

Query: 362 TYTTMV-GILGRARQFGAIN---KLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDV 417
           TY T++ G L +    G +N   +LLD M  +GC+P+  TYN L+  + +   L  A   
Sbjct: 445 TYNTLINGYLTK----GNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFY 500

Query: 418 FKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGK 477
           F++M   G  P+ V+Y  LID H+K G +D+A+ + K+M+  G +P+  +Y+ +IN L K
Sbjct: 501 FQEMVECGLNPNPVSYTALIDGHSKDGKVDIALSLLKRMEEMGCNPNVESYNAVINGLSK 560

Query: 478 AGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVT 537
                 A ++  +MV QG +PN++TY  +I    +    Q A K++ DM+     P+  T
Sbjct: 561 ENRFSEAEKICDKMVEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYT 620

Query: 538 YSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAML 597
           YS ++  L   G  DEAE +  EM RK   PDE  +  L+D +   G +  A+     M+
Sbjct: 621 YSSLIYGLCQEGKADEAEILLKEMERKGLAPDEVTFTSLIDGFVVLGRIDHAFLLLRRMV 680

Query: 598 QAGLRPNVPTCNSLLSAF 615
             G +PN  T + LL   
Sbjct: 681 DMGCKPNYRTYSVLLKGL 698



 Score =  147 bits (370), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 97/328 (29%), Positives = 159/328 (48%), Gaps = 2/328 (0%)

Query: 323 YSMDAYQANQVLKQLQDHTVALGFFNWLRRQ--AGFKHDEHTYTTMVGILGRARQFGAIN 380
           +    Y  N +L QL    +  G  N  ++   +G +    T+ T++ IL +  +     
Sbjct: 159 FGFSLYSCNTLLIQLAKFEMVEGARNLYKQMLNSGIQPSLLTFNTLINILSKKGKVREAE 218

Query: 381 KLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIH 440
            +L Q+ +    P+V TY  LI  + R   L+ A  VF +M   GC+P+ VTY TLI+  
Sbjct: 219 LILSQIFQYDLSPDVFTYTSLILGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGL 278

Query: 441 AKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNL 500
              G +D A+DM ++M   G+ P  +TY++ I  L    H + A +L   M  +GC PN+
Sbjct: 279 CNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNV 338

Query: 501 VTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAE 560
            TY  +I+  ++    + A+ LY  M   G  P+ VTY+ ++  L   G    A  +F  
Sbjct: 339 QTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHW 398

Query: 561 MRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQ 620
           M     + +   Y  ++      G++ KA   +E ML+ G  P V T N+L++ +L  G 
Sbjct: 399 MEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGN 458

Query: 621 LSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
           +++A  LL  M   G +P   TY  L+S
Sbjct: 459 VNNAARLLDLMKENGCEPDEWTYNELVS 486



 Score =  145 bits (365), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 90/307 (29%), Positives = 156/307 (50%), Gaps = 1/307 (0%)

Query: 341 TVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNR 400
           + AL  F+W+       + + TY  ++  L           L ++M++ G  P VVTYN 
Sbjct: 390 STALKIFHWMEGHGSLANTQ-TYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNT 448

Query: 401 LIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAG 460
           LI+ Y     +N A  +   M+  GCEPD  TY  L+   +K G L+ A   +++M   G
Sbjct: 449 LINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECG 508

Query: 461 LSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSAL 520
           L+P+  +Y+ +I+   K G +  A  L   M   GC PN+ +YN +I   +K   +  A 
Sbjct: 509 LNPNPVSYTALIDGHSKDGKVDIALSLLKRMEEMGCNPNVESYNAVINGLSKENRFSEAE 568

Query: 521 KLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLW 580
           K+   M   G  P+ +TY+ +++ L   G    A  +F +M ++  +P+   Y  L+   
Sbjct: 569 KICDKMVEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGL 628

Query: 581 GKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSL 640
            + G   +A    + M + GL P+  T  SL+  F+ +G++  A+ LL+ M+++G KP+ 
Sbjct: 629 CQEGKADEAEILLKEMERKGLAPDEVTFTSLIDGFVVLGRIDHAFLLLRRMVDMGCKPNY 688

Query: 641 QTYTLLL 647
           +TY++LL
Sbjct: 689 RTYSVLL 695



 Score =  142 bits (357), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 89/295 (30%), Positives = 151/295 (51%)

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
           Q     D  TYT+++    R R       + D+MV++GC PN VTY+ LI+       ++
Sbjct: 226 QYDLSPDVFTYTSLILGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVD 285

Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
           EALD+ ++M   G EP   TY   I         + A+++  +M+  G  P+  TY+ +I
Sbjct: 286 EALDMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALI 345

Query: 473 NCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFE 532
           + L + G L+ A  L+ +M+ +G +PN VTYN +I        + +ALK++  M+  G  
Sbjct: 346 SGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSL 405

Query: 533 PDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEW 592
            +  TY+ +++ L   G +++A  +F +M +   +P    Y  L++ +   GNV  A   
Sbjct: 406 ANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARL 465

Query: 593 YEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
            + M + G  P+  T N L+S F + G+L  A    Q M+  GL P+  +YT L+
Sbjct: 466 LDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTALI 520



 Score =  136 bits (342), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 92/314 (29%), Positives = 149/314 (47%), Gaps = 1/314 (0%)

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
           + G +   +TYT  +  L          +L+ +M + GC+PNV TY  LI    R   L 
Sbjct: 296 EKGIEPTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLE 355

Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
            A+ ++ +M   G  P+ VTY  LI+     G    A+ ++  M+  G   +T TY+ II
Sbjct: 356 VAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEII 415

Query: 473 NCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFE 532
             L   G ++ A  LF +M+  G +P +VTYN +I       N  +A +L   M+  G E
Sbjct: 416 KGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCE 475

Query: 533 PDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEW 592
           PD+ TY+ ++      G L+ A   F EM      P+   Y  L+D   K G V  A   
Sbjct: 476 PDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTALIDGHSKDGKVDIALSL 535

Query: 593 YEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS-CCT 651
            + M + G  PNV + N++++   +  + S+A  +   M+  GL P++ TYT L+   C 
Sbjct: 536 LKRMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMVEQGLLPNVITYTTLIDGLCR 595

Query: 652 EARSPYDMGFCHEL 665
             R+ +     H++
Sbjct: 596 NGRTQFAFKIFHDM 609



 Score =  129 bits (324), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 134/559 (23%), Positives = 234/559 (41%), Gaps = 46/559 (8%)

Query: 272 SKP--SREMKIPAGLAPFSRHFASTGNVVESVSRILRQWKWGPLAEEALGNTNYSMDAYQ 329
           SKP  S    +PA   PF    A    V   +SR+  QWK        L   +  + A+ 
Sbjct: 27  SKPHISSHFAVPASREPFQ---AIVSRVCAILSRV--QWK----GSSELKQLSPQLKAHH 77

Query: 330 ANQVLKQLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRD 389
             +++   +D    + FF W+ ++  +KH+ + + +M+  L R R F   + +   M++ 
Sbjct: 78  VAEIVAVHKDTESVIQFFYWISKRPFYKHNMNCFISMLNRLVRDRVFAPADHIRILMIKA 137

Query: 390 --------------------GCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPD 429
                               G   ++ + N L+    +   +  A +++KQM   G +P 
Sbjct: 138 CRNEEEIRRVADFLNEISGMGFGFSLYSCNTLLIQLAKFEMVEGARNLYKQMLNSGIQPS 197

Query: 430 RVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFC 489
            +T+ TLI+I +K G +  A  +  ++    LSPD FTY+ +I    +  +L  A  +F 
Sbjct: 198 LLTFNTLINILSKKGKVREAELILSQIFQYDLSPDVFTYTSLILGHCRNRNLDLAFGVFD 257

Query: 490 EMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCG 549
            MV +GC PN VTY+ +I           AL +  +M   G EP   TY++ +  L    
Sbjct: 258 RMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITALCAIE 317

Query: 550 YLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCN 609
           + +EA  + A M+++   P+   Y  L+    + G +  A   Y  ML+ GL PN  T N
Sbjct: 318 HEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYN 377

Query: 610 SLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYT-LLLSCCTEARSPYDMGFCHELMAV 668
           +L++     G+ S A  +   M   G   + QTY  ++   C        M    +++ +
Sbjct: 378 ALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKM 437

Query: 669 SGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRESKRGLVDAVVDFLHKSGLKEE 728
              P  +   ++ +      NV ++    L++M     E      + +V    K G  E 
Sbjct: 438 GPLPTVVTYNTLINGYLTKGNV-NNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLES 496

Query: 729 AGSVWEVAAQKNVYPDAVKEKGMSYWLINLHVMSDGTAVIALSRTLAWFRKQMLISGVGP 788
           A   ++   +  + P+ V        LI+ H   DG   IALS       K+M   G  P
Sbjct: 497 ASFYFQEMVECGLNPNPVSYTA----LIDGHS-KDGKVDIALS-----LLKRMEEMGCNP 546

Query: 789 ---SRIDIVTGWGRRSRVT 804
              S   ++ G  + +R +
Sbjct: 547 NVESYNAVINGLSKENRFS 565



 Score =  119 bits (298), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 81/305 (26%), Positives = 145/305 (47%), Gaps = 1/305 (0%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           ++ G + +  TYT ++  L R  +      L  +M+++G  PN VTYN LI+        
Sbjct: 330 KKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRF 389

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
           + AL +F  M+  G   +  TY  +I      G ++ AM +++KM   G  P   TY+ +
Sbjct: 390 STALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTL 449

Query: 472 INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF 531
           IN     G++  A +L   M   GC P+  TYN +++  +K    +SA   +++M   G 
Sbjct: 450 INGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGL 509

Query: 532 EPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWE 591
            P+ V+Y+ +++     G +D A ++   M      P+   Y  +++   K     +A +
Sbjct: 510 NPNPVSYTALIDGHSKDGKVDIALSLLKRMEEMGCNPNVESYNAVINGLSKENRFSEAEK 569

Query: 592 WYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTY-TLLLSCC 650
             + M++ GL PNV T  +L+    R G+   A+ +   M      P+L TY +L+   C
Sbjct: 570 ICDKMVEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLC 629

Query: 651 TEARS 655
            E ++
Sbjct: 630 QEGKA 634



 Score = 66.6 bits (161), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 39/116 (33%), Positives = 61/116 (52%)

Query: 362 TYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQM 421
           TYTT++  L R  +     K+   M +  C PN+ TY+ LI+   +    +EA  + K+M
Sbjct: 585 TYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKADEAEILLKEM 644

Query: 422 QVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGK 477
           +  G  PD VT+ +LID     G +D A  + ++M   G  P+  TYSV++  L K
Sbjct: 645 ERKGLAPDEVTFTSLIDGFVVLGRIDHAFLLLRRMVDMGCKPNYRTYSVLLKGLQK 700


>gi|168000162|ref|XP_001752785.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162695948|gb|EDQ82289.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 482

 Score =  148 bits (373), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 121/471 (25%), Positives = 211/471 (44%), Gaps = 26/471 (5%)

Query: 282 AGLAPFSRHFASTGNVVESVSRILRQWKWGPLAEE------ALGNTNYSMDAYQANQ--- 332
           AG+ P ++     G     V+R  +Q KW  +  E      A+G  +   +  + ++   
Sbjct: 17  AGIVPETKKQQGLGETSSRVAR--KQLKWEKMMREIEVSGSAVGVLSSRKEDGKVSKGDV 74

Query: 333 -----VLKQLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMV 387
                 L+QL   T+ L    WL++Q  +    H +  M+   G+  Q G       +M 
Sbjct: 75  LGTLIRLRQLNKWTMVLEVLLWLKQQDWWNFGIHDFNLMIAAYGKLGQPGIAELSFTEMR 134

Query: 388 RDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLD 447
             G +PNV  +  L+ ++ R      A  ++++M   G  P  VTY   I+   KA   +
Sbjct: 135 EVGLEPNVACFTSLLEAHARTGNFVRAESIYQEMLKTGPAPTEVTYQVYINALCKAERFN 194

Query: 448 VAMDMYKKM-QAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIM 506
            A  ++K + ++A   PD   Y+++++  GKAG       LF +M   G    +VT+N +
Sbjct: 195 DAERIFKCLDESAEAKPDARLYNLMLHTYGKAGKFSEQQALFRQMKGAGVPMTVVTFNSL 254

Query: 507 IALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNW 566
           +A Q    + ++ L   R MQ A  +PD +TY+ ++        ++EA  VF EM     
Sbjct: 255 MAFQKTVADAEACL---RHMQAAKIKPDVITYTGLINAYSKARRVEEAHVVFREMVASGL 311

Query: 567 VPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYH 626
            P    Y  L+D + K   V  A   +++M Q   RP++ +  +LL+A+   G +  A  
Sbjct: 312 RPSRIAYNTLLDAYAKCKEVEGAESLFKSMGQDRCRPDIRSYTTLLAAYANTGNMKKAER 371

Query: 627 LLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGFCHELMAVSG-HP-AHMFLLSMPSPG 684
           LL+ M   GL+P++ TY  L+   T       M    E +  +G  P + +F L + + G
Sbjct: 372 LLKRMKQAGLEPNVVTYGTLMQGYTSVHDINAMLQTFEDLQKAGIKPNSTIFTLLVRTFG 431

Query: 685 PDGQNVRDHVGSFLEMMHS---EDRESKRGLVDAVVDFLHKSGLKEEAGSV 732
              ++    +  F +M+ S    D+ S+  L+DA      K  + E  GS+
Sbjct: 432 QQ-EDFESALSWFKKMLDSGCPADQRSRAALMDACQTSEQKQEVLEYFGSL 481


>gi|224143015|ref|XP_002324819.1| predicted protein [Populus trichocarpa]
 gi|222866253|gb|EEF03384.1| predicted protein [Populus trichocarpa]
          Length = 552

 Score =  148 bits (373), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 88/310 (28%), Positives = 155/310 (50%), Gaps = 1/310 (0%)

Query: 349 WLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDG-CQPNVVTYNRLIHSYGR 407
           W  ++ G K    TY T++   G A +     KLL+ M ++G  +PN+ TYN L+ ++  
Sbjct: 107 WKMQENGMKPTTSTYNTLIKGYGIAGKPEESVKLLELMSQEGNVKPNLRTYNVLVRAWCN 166

Query: 408 ANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFT 467
              + EA +V  +M   G +PD VTY T+   +A+ G LD A  +  +MQ  G+ P+  T
Sbjct: 167 KKRITEAWNVVYKMIASGIQPDVVTYNTIATAYAQKGALDQAEGVILEMQNNGVQPNERT 226

Query: 468 YSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQ 527
             +I++   K G ++ A +    M   G  PNLV +N +I       +     ++   M+
Sbjct: 227 CGIIMSGYCKEGRIREALRFAYRMKELGIHPNLVIFNSLIKGFVAIMDRDGVDEVLNLME 286

Query: 528 NAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVR 587
             G +PD +T+S +M      G++++   +F +M +    PD   Y +L   + +A    
Sbjct: 287 EFGVKPDVITFSTIMNAWSTAGFMEKCREIFDDMVKAGIEPDAHAYSILAKGYVRAQEPE 346

Query: 588 KAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
           KA E    M+++G +PNV    +++S +   G++  A  +   M   G+ P+L+T+  L+
Sbjct: 347 KAEELLTTMIKSGFQPNVVIFTTVISGWCSAGKMDYAVRVFDKMCQRGISPNLKTFETLI 406

Query: 648 SCCTEARSPY 657
               EAR P+
Sbjct: 407 WGFAEARQPW 416



 Score =  131 bits (329), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 71/269 (26%), Positives = 137/269 (50%), Gaps = 1/269 (0%)

Query: 386 MVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGF 445
           ++  G +P++++Y  L+ +       +    +  Q++  G  PD + +  +I+  +++G 
Sbjct: 39  LIEGGHKPSLISYTTLLAALTMQKRFDSIYSIISQVEENGMNPDSIFFNAVINAFSESGN 98

Query: 446 LDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCI-PNLVTYN 504
           ++ AM+ + KMQ  G+ P T TY+ +I   G AG  + + +L   M  +G + PNL TYN
Sbjct: 99  MESAMETFWKMQENGMKPTTSTYNTLIKGYGIAGKPEESVKLLELMSQEGNVKPNLRTYN 158

Query: 505 IMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRK 564
           +++      +    A  +   M  +G +PD VTY+ +       G LD+AE V  EM+  
Sbjct: 159 VLVRAWCNKKRITEAWNVVYKMIASGIQPDVVTYNTIATAYAQKGALDQAEGVILEMQNN 218

Query: 565 NWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDA 624
              P+E   G+++  + K G +R+A  +   M + G+ PN+   NSL+  F+ +      
Sbjct: 219 GVQPNERTCGIIMSGYCKEGRIREALRFAYRMKELGIHPNLVIFNSLIKGFVAIMDRDGV 278

Query: 625 YHLLQGMLNLGLKPSLQTYTLLLSCCTEA 653
             +L  M   G+KP + T++ +++  + A
Sbjct: 279 DEVLNLMEEFGVKPDVITFSTIMNAWSTA 307



 Score = 97.8 bits (242), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 68/275 (24%), Positives = 126/275 (45%)

Query: 354 AGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNE 413
           +G + D  TY T+     +         ++ +M  +G QPN  T   ++  Y +   + E
Sbjct: 183 SGIQPDVVTYNTIATAYAQKGALDQAEGVILEMQNNGVQPNERTCGIIMSGYCKEGRIRE 242

Query: 414 ALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIIN 473
           AL    +M+ +G  P+ V + +LI         D   ++   M+  G+ PD  T+S I+N
Sbjct: 243 ALRFAYRMKELGIHPNLVIFNSLIKGFVAIMDRDGVDEVLNLMEEFGVKPDVITFSTIMN 302

Query: 474 CLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEP 533
               AG ++   ++F +MV  G  P+   Y+I+     +A+  + A +L   M  +GF+P
Sbjct: 303 AWSTAGFMEKCREIFDDMVKAGIEPDAHAYSILAKGYVRAQEPEKAEELLTTMIKSGFQP 362

Query: 534 DKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWY 593
           + V ++ V+      G +D A  VF +M ++   P+   +  L+  + +A    KA E  
Sbjct: 363 NVVIFTTVISGWCSAGKMDYAVRVFDKMCQRGISPNLKTFETLIWGFAEARQPWKAEEIL 422

Query: 594 EAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLL 628
           + M +  ++P   T   +  A+   G   +A  LL
Sbjct: 423 QIMTEFEVQPEKSTMLLVAEAWRATGMTKEANRLL 457



 Score = 83.6 bits (205), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 47/187 (25%), Positives = 93/187 (49%)

Query: 378 AINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLI 437
            ++++L+ M   G +P+V+T++ +++++  A ++ +  ++F  M   G EPD   Y  L 
Sbjct: 277 GVDEVLNLMEEFGVKPDVITFSTIMNAWSTAGFMEKCREIFDDMVKAGIEPDAHAYSILA 336

Query: 438 DIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCI 497
             + +A   + A ++   M  +G  P+   ++ +I+    AG +  A ++F +M  +G  
Sbjct: 337 KGYVRAQEPEKAEELLTTMIKSGFQPNVVIFTTVISGWCSAGKMDYAVRVFDKMCQRGIS 396

Query: 498 PNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAV 557
           PNL T+  +I   A+AR    A ++ + M     +P+K T  +V E     G   EA  +
Sbjct: 397 PNLKTFETLIWGFAEARQPWKAEEILQIMTEFEVQPEKSTMLLVAEAWRATGMTKEANRL 456

Query: 558 FAEMRRK 564
                RK
Sbjct: 457 LGTRNRK 463



 Score = 82.4 bits (202), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 61/312 (19%), Positives = 128/312 (41%), Gaps = 38/312 (12%)

Query: 471 IINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAG 530
           ++N L + G  Q A  +F  ++  G  P+L++Y  ++A     + + S   +   ++  G
Sbjct: 19  LMNFLVEKGKPQEAESIFYSLIEGGHKPSLISYTTLLAALTMQKRFDSIYSIISQVEENG 78

Query: 531 FEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGN----- 585
             PD + ++ V+      G ++ A   F +M+     P    Y  L+  +G AG      
Sbjct: 79  MNPDSIFFNAVINAFSESGNMESAMETFWKMQENGMKPTTSTYNTLIKGYGIAGKPEESV 138

Query: 586 -------------------------------VRKAWEWYEAMLQAGLRPNVPTCNSLLSA 614
                                          + +AW     M+ +G++P+V T N++ +A
Sbjct: 139 KLLELMSQEGNVKPNLRTYNVLVRAWCNKKRITEAWNVVYKMIASGIQPDVVTYNTIATA 198

Query: 615 FLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS-CCTEARSPYDMGFCHELMAVSGHPA 673
           + + G L  A  ++  M N G++P+ +T  +++S  C E R    + F + +  +  HP 
Sbjct: 199 YAQKGALDQAEGVILEMQNNGVQPNERTCGIIMSGYCKEGRIREALRFAYRMKELGIHP- 257

Query: 674 HMFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRESKRGLVDAVVDFLHKSGLKEEAGSVW 733
           ++ + +    G      RD V   L +M     +        +++    +G  E+   ++
Sbjct: 258 NLVIFNSLIKGFVAIMDRDGVDEVLNLMEEFGVKPDVITFSTIMNAWSTAGFMEKCREIF 317

Query: 734 EVAAQKNVYPDA 745
           +   +  + PDA
Sbjct: 318 DDMVKAGIEPDA 329



 Score = 55.8 bits (133), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 37/136 (27%), Positives = 66/136 (48%)

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
           +AG + D H Y+ +     RA++     +LL  M++ G QPNVV +  +I  +  A  ++
Sbjct: 322 KAGIEPDAHAYSILAKGYVRAQEPEKAEELLTTMIKSGFQPNVVIFTTVISGWCSAGKMD 381

Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
            A+ VF +M   G  P+  T+ TLI   A+A     A ++ + M    + P+  T  ++ 
Sbjct: 382 YAVRVFDKMCQRGISPNLKTFETLIWGFAEARQPWKAEEILQIMTEFEVQPEKSTMLLVA 441

Query: 473 NCLGKAGHLQAAHQLF 488
                 G  + A++L 
Sbjct: 442 EAWRATGMTKEANRLL 457


>gi|224129154|ref|XP_002320514.1| predicted protein [Populus trichocarpa]
 gi|222861287|gb|EEE98829.1| predicted protein [Populus trichocarpa]
          Length = 478

 Score =  148 bits (373), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 105/373 (28%), Positives = 185/373 (49%), Gaps = 36/373 (9%)

Query: 328 YQANQVLKQLQ-DHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAIN------ 380
           ++ N +L ++Q DH ++L FFN L+          T++ ++ IL +  +F +        
Sbjct: 43  FRVNHILLKIQKDHVLSLEFFNSLKTLNPISLTLETHSIILHILTKKSKFKSAQSILRTL 102

Query: 381 ----------KLLDQMVRD--GCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEP 428
                     KL D ++     C  +   ++ L  +Y   N    A DVF +M+  G  P
Sbjct: 103 LASRSIDLPGKLFDTLLFSYRMCDSSPRVFDSLFKTYAHMNKFRNATDVFSRMKDYGFLP 162

Query: 429 DRVTYC-----TLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQA 483
             V  C     +L+D H     +D+A+  Y++M+   +SP+++T++++++ L K+G L+ 
Sbjct: 163 T-VESCNAYLSSLLDFHR----VDIALTFYREMRRCRISPNSYTFNLVLSALCKSGKLEK 217

Query: 484 AHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVME 543
           A ++  EM + G  PN+V+YN +IA          A KL   M   G EP+ VT++ ++ 
Sbjct: 218 AVEVLREMESVGITPNVVSYNTLIAGHCNKGLLSIATKLKNLMGKNGLEPNVVTFNSLIH 277

Query: 544 VLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRP 603
                G L EA   F+EM+  N  P+   Y  L++ +G+ GN   A + YE M++ G++ 
Sbjct: 278 GFCKEGKLHEANRFFSEMKVMNVTPNTVTYNTLINGYGQVGNSNMAGKVYEEMMRNGVKA 337

Query: 604 NVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS--CCTEARSPYDMGF 661
           ++ T N+L+    + G+   A  L++ +    L P+  TY+ L+S  C   AR   D  F
Sbjct: 338 DILTYNALILGLCKEGKTKKAAFLVKELDKENLVPNASTYSALISGQC---ARKNSDRAF 394

Query: 662 -CHELMAVSG-HP 672
             ++ M  SG HP
Sbjct: 395 QLYKSMVRSGCHP 407



 Score =  138 bits (348), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 87/289 (30%), Positives = 144/289 (49%), Gaps = 11/289 (3%)

Query: 385 QMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAG 444
           +M R    PN  T+N ++ +  ++  L +A++V ++M+ VG  P+ V+Y TLI  H   G
Sbjct: 189 EMRRCRISPNSYTFNLVLSALCKSGKLEKAVEVLREMESVGITPNVVSYNTLIAGHCNKG 248

Query: 445 FLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYN 504
            L +A  +   M   GL P+  T++ +I+   K G L  A++ F EM      PN VTYN
Sbjct: 249 LLSIATKLKNLMGKNGLEPNVVTFNSLIHGFCKEGKLHEANRFFSEMKVMNVTPNTVTYN 308

Query: 505 IMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHC--GYLDEAEAVFAEMR 562
            +I    +  N   A K+Y +M   G + D +TY+ +  +LG C  G   +A  +  E+ 
Sbjct: 309 TLINGYGQVGNSNMAGKVYEEMMRNGVKADILTYNAL--ILGLCKEGKTKKAAFLVKELD 366

Query: 563 RKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLS 622
           ++N VP+   Y  L+       N  +A++ Y++M+++G  PN  T   L SAF++     
Sbjct: 367 KENLVPNASTYSALISGQCARKNSDRAFQLYKSMVRSGCHPNEQTFKMLTSAFVKNEDFE 426

Query: 623 DAYHLLQGMLNLGLKPS----LQTYTLLLSCCTEARSPYDMGFCHELMA 667
            A+++L  M    +       L+ Y  L  C  E  +   M  CHE+ A
Sbjct: 427 GAFNVLMDMFARSMASDSNTLLEIYDGLCQCGKENLA---MKLCHEMEA 472



 Score =  107 bits (267), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 66/241 (27%), Positives = 122/241 (50%), Gaps = 20/241 (8%)

Query: 362 TYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQM 421
           +Y T++             KL + M ++G +PNVVT+N LIH + +   L+EA   F +M
Sbjct: 236 SYNTLIAGHCNKGLLSIATKLKNLMGKNGLEPNVVTFNSLIHGFCKEGKLHEANRFFSEM 295

Query: 422 QVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHL 481
           +V+   P+ VTY TLI+ + + G  ++A  +Y++M   G+  D  TY+ +I  L K G  
Sbjct: 296 KVMNVTPNTVTYNTLINGYGQVGNSNMAGKVYEEMMRNGVKADILTYNALILGLCKEGKT 355

Query: 482 QAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIV 541
           + A  L  E+  +  +PN  TY+ +I+ Q   +N   A +LY+ M  +G  P++ T+ ++
Sbjct: 356 KKAAFLVKELDKENLVPNASTYSALISGQCARKNSDRAFQLYKSMVRSGCHPNEQTFKML 415

Query: 542 MEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGK--AGNVRKAWEWYEAMLQA 599
                            A ++ +++   E  + +L+D++ +  A +     E Y+ + Q 
Sbjct: 416 TS---------------AFVKNEDF---EGAFNVLMDMFARSMASDSNTLLEIYDGLCQC 457

Query: 600 G 600
           G
Sbjct: 458 G 458



 Score = 84.3 bits (207), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 56/208 (26%), Positives = 94/208 (45%)

Query: 362 TYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQM 421
           T+ +++    +  +    N+   +M      PN VTYN LI+ YG+    N A  V+++M
Sbjct: 271 TFNSLIHGFCKEGKLHEANRFFSEMKVMNVTPNTVTYNTLINGYGQVGNSNMAGKVYEEM 330

Query: 422 QVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHL 481
              G + D +TY  LI    K G    A  + K++    L P+  TYS +I+      + 
Sbjct: 331 MRNGVKADILTYNALILGLCKEGKTKKAAFLVKELDKENLVPNASTYSALISGQCARKNS 390

Query: 482 QAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIV 541
             A QL+  MV  GC PN  T+ ++ +   K  +++ A  +  DM       D  T   +
Sbjct: 391 DRAFQLYKSMVRSGCHPNEQTFKMLTSAFVKNEDFEGAFNVLMDMFARSMASDSNTLLEI 450

Query: 542 MEVLGHCGYLDEAEAVFAEMRRKNWVPD 569
            + L  CG  + A  +  EM  +  +P+
Sbjct: 451 YDGLCQCGKENLAMKLCHEMEARRLIPE 478


>gi|449444190|ref|XP_004139858.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Cucumis sativus]
 gi|449530677|ref|XP_004172320.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Cucumis sativus]
          Length = 839

 Score =  148 bits (373), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 95/328 (28%), Positives = 158/328 (48%), Gaps = 41/328 (12%)

Query: 359 DEHTYTTMVGILGRARQFGAIN---KLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEAL 415
           D  TYT++  I+G  +  G ++   ++ D+MV+DGC PN VTY+ LI+       L EA+
Sbjct: 236 DTFTYTSL--IIGHCKN-GNLDLAFEMFDRMVKDGCDPNSVTYSALINGLCSEGRLEEAM 292

Query: 416 DVFKQM-----------------------------------QVVGCEPDRVTYCTLIDIH 440
           D+ ++M                                   +  GC P+  TY  LI   
Sbjct: 293 DMLEEMIDKGIEPTVHAYTIPIVSLCDAGRSCEAVKLLGKMKKRGCGPNVQTYTALISGL 352

Query: 441 AKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNL 500
           ++ G  +VA+ +Y KM A GL P   TYS +IN L   G  + A  +F  M++   +PN 
Sbjct: 353 SRDGKFEVAIGVYHKMLADGLVPTAVTYSALINQLYVEGRFETALTIFEWMLSHDSLPNT 412

Query: 501 VTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAE 560
            TYN++I         Q A  ++  M  AG  P+ +TY+I++ +    GY++ A  +   
Sbjct: 413 ETYNVIIKGFCSIGYIQKATAIFDQMLKAGPSPNVITYNIIIHIYFKQGYMNNAMRLLEM 472

Query: 561 MRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQ 620
           M+      D   Y  L+  + + G +  A+  +  M++ G+ PNV T N++++ +L V +
Sbjct: 473 MKGNGLKLDTWTYANLISGFSRGGKLEHAFSLFNEMVEHGISPNVVTYNAIINGYLTVAK 532

Query: 621 LSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
           + DA  L   M+  G  PS  TY +++S
Sbjct: 533 VDDALALFWKMVESGNVPSSGTYNMMIS 560



 Score =  143 bits (360), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 87/295 (29%), Positives = 149/295 (50%)

Query: 354 AGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNE 413
           +G + +  T+  M+ IL    +      ++  +   G  P+  TY  LI  + +   L+ 
Sbjct: 196 SGIRPNLFTFNAMIKILCNKGKVQEAELIMGHIFHYGACPDTFTYTSLIIGHCKNGNLDL 255

Query: 414 ALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIIN 473
           A ++F +M   GC+P+ VTY  LI+     G L+ AMDM ++M   G+ P    Y++ I 
Sbjct: 256 AFEMFDRMVKDGCDPNSVTYSALINGLCSEGRLEEAMDMLEEMIDKGIEPTVHAYTIPIV 315

Query: 474 CLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEP 533
            L  AG    A +L  +M  +GC PN+ TY  +I+  ++   ++ A+ +Y  M   G  P
Sbjct: 316 SLCDAGRSCEAVKLLGKMKKRGCGPNVQTYTALISGLSRDGKFEVAIGVYHKMLADGLVP 375

Query: 534 DKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWY 593
             VTYS ++  L   G  + A  +F  M   + +P+   Y +++  +   G ++KA   +
Sbjct: 376 TAVTYSALINQLYVEGRFETALTIFEWMLSHDSLPNTETYNVIIKGFCSIGYIQKATAIF 435

Query: 594 EAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
           + ML+AG  PNV T N ++  + + G +++A  LL+ M   GLK    TY  L+S
Sbjct: 436 DQMLKAGPSPNVITYNIIIHIYFKQGYMNNAMRLLEMMKGNGLKLDTWTYANLIS 490



 Score =  141 bits (355), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 88/294 (29%), Positives = 144/294 (48%), Gaps = 5/294 (1%)

Query: 362 TYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQM 421
           TY+ ++  L    +F     + + M+     PN  TYN +I  +    Y+ +A  +F QM
Sbjct: 379 TYSALINQLYVEGRFETALTIFEWMLSHDSLPNTETYNVIIKGFCSIGYIQKATAIFDQM 438

Query: 422 QVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHL 481
              G  P+ +TY  +I I+ K G+++ AM + + M+  GL  DT+TY+ +I+   + G L
Sbjct: 439 LKAGPSPNVITYNIIIHIYFKQGYMNNAMRLLEMMKGNGLKLDTWTYANLISGFSRGGKL 498

Query: 482 QAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIV 541
           + A  LF EMV  G  PN+VTYN +I           AL L+  M  +G  P   TY+++
Sbjct: 499 EHAFSLFNEMVEHGISPNVVTYNAIINGYLTVAKVDDALALFWKMVESGNVPSSGTYNMM 558

Query: 542 MEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGL 601
           +        + EAE    +M ++  +P+   Y   +D   K G    A++ +  M +   
Sbjct: 559 ISGFSKTNRISEAENFCGKMVKQGLLPNVITYTSFIDGLCKNGRTSLAFKIFHEMKKRDY 618

Query: 602 RPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL-SCCTEAR 654
            PN+ T +SL+    + GQ  DA  LL      G +P++ TYT L+   C + R
Sbjct: 619 FPNLCTYSSLIDGLCQEGQAEDAERLLDD----GCEPNVDTYTTLVRGLCGKGR 668



 Score =  138 bits (348), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 92/313 (29%), Positives = 153/313 (48%), Gaps = 3/313 (0%)

Query: 355 GFKHDEHTYTT-MVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNE 413
           G +   H YT  +V +    R   A+ KLL +M + GC PNV TY  LI    R      
Sbjct: 302 GIEPTVHAYTIPIVSLCDAGRSCEAV-KLLGKMKKRGCGPNVQTYTALISGLSRDGKFEV 360

Query: 414 ALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIIN 473
           A+ V+ +M   G  P  VTY  LI+     G  + A+ +++ M +    P+T TY+VII 
Sbjct: 361 AIGVYHKMLADGLVPTAVTYSALINQLYVEGRFETALTIFEWMLSHDSLPNTETYNVIIK 420

Query: 474 CLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEP 533
                G++Q A  +F +M+  G  PN++TYNI+I +  K     +A++L   M+  G + 
Sbjct: 421 GFCSIGYIQKATAIFDQMLKAGPSPNVITYNIIIHIYFKQGYMNNAMRLLEMMKGNGLKL 480

Query: 534 DKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWY 593
           D  TY+ ++      G L+ A ++F EM      P+   Y  +++ +     V  A   +
Sbjct: 481 DTWTYANLISGFSRGGKLEHAFSLFNEMVEHGISPNVVTYNAIINGYLTVAKVDDALALF 540

Query: 594 EAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS-CCTE 652
             M+++G  P+  T N ++S F +  ++S+A +    M+  GL P++ TYT  +   C  
Sbjct: 541 WKMVESGNVPSSGTYNMMISGFSKTNRISEAENFCGKMVKQGLLPNVITYTSFIDGLCKN 600

Query: 653 ARSPYDMGFCHEL 665
            R+       HE+
Sbjct: 601 GRTSLAFKIFHEM 613



 Score =  121 bits (304), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 81/305 (26%), Positives = 143/305 (46%), Gaps = 1/305 (0%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           ++ G   +  TYT ++  L R  +F     +  +M+ DG  P  VTY+ LI+        
Sbjct: 334 KKRGCGPNVQTYTALISGLSRDGKFEVAIGVYHKMLADGLVPTAVTYSALINQLYVEGRF 393

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
             AL +F+ M      P+  TY  +I      G++  A  ++ +M  AG SP+  TY++I
Sbjct: 394 ETALTIFEWMLSHDSLPNTETYNVIIKGFCSIGYIQKATAIFDQMLKAGPSPNVITYNII 453

Query: 472 INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF 531
           I+   K G++  A +L   M   G   +  TY  +I+  ++    + A  L+ +M   G 
Sbjct: 454 IHIYFKQGYMNNAMRLLEMMKGNGLKLDTWTYANLISGFSRGGKLEHAFSLFNEMVEHGI 513

Query: 532 EPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWE 591
            P+ VTY+ ++        +D+A A+F +M     VP    Y +++  + K   + +A  
Sbjct: 514 SPNVVTYNAIINGYLTVAKVDDALALFWKMVESGNVPSSGTYNMMISGFSKTNRISEAEN 573

Query: 592 WYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS-CC 650
           +   M++ GL PNV T  S +    + G+ S A+ +   M      P+L TY+ L+   C
Sbjct: 574 FCGKMVKQGLLPNVITYTSFIDGLCKNGRTSLAFKIFHEMKKRDYFPNLCTYSSLIDGLC 633

Query: 651 TEARS 655
            E ++
Sbjct: 634 QEGQA 638



 Score =  118 bits (296), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 86/346 (24%), Positives = 145/346 (41%), Gaps = 40/346 (11%)

Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLI 402
           AL  F W+       + E TY  ++              + DQM++ G  PNV+TYN +I
Sbjct: 396 ALTIFEWMLSHDSLPNTE-TYNVIIKGFCSIGYIQKATAIFDQMLKAGPSPNVITYNIII 454

Query: 403 HSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLS 462
           H Y +  Y+N A+ + + M+  G + D  TY  LI   ++ G L+ A  ++ +M   G+S
Sbjct: 455 HIYFKQGYMNNAMRLLEMMKGNGLKLDTWTYANLISGFSRGGKLEHAFSLFNEMVEHGIS 514

Query: 463 PDTFTYSVIINC-----------------------------------LGKAGHLQAAHQL 487
           P+  TY+ IIN                                      K   +  A   
Sbjct: 515 PNVVTYNAIINGYLTVAKVDDALALFWKMVESGNVPSSGTYNMMISGFSKTNRISEAENF 574

Query: 488 FCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGH 547
             +MV QG +PN++TY   I    K      A K++ +M+   + P+  TYS +++ L  
Sbjct: 575 CGKMVKQGLLPNVITYTSFIDGLCKNGRTSLAFKIFHEMKKRDYFPNLCTYSSLIDGLCQ 634

Query: 548 CGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPT 607
            G  ++AE +  +       P+   Y  LV      G   +A +  E+M + GL+P+   
Sbjct: 635 EGQAEDAERLLDD----GCEPNVDTYTTLVRGLCGKGRCYEADQLVESMKKKGLQPSEEI 690

Query: 608 CNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEA 653
             +LL    +  ++  A  +   M+  G +P L  Y  L+    +A
Sbjct: 691 YRALLVGQCKNLEVESALKIFDSMVTTGFQPCLSDYKALICALCKA 736



 Score =  115 bits (289), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 84/293 (28%), Positives = 134/293 (45%), Gaps = 4/293 (1%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           G K D  TY  ++    R  +      L ++MV  G  PNVVTYN +I+ Y     +++A
Sbjct: 477 GLKLDTWTYANLISGFSRGGKLEHAFSLFNEMVEHGISPNVVTYNAIINGYLTVAKVDDA 536

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
           L +F +M   G  P   TY  +I   +K   +  A +   KM   GL P+  TY+  I+ 
Sbjct: 537 LALFWKMVESGNVPSSGTYNMMISGFSKTNRISEAENFCGKMVKQGLLPNVITYTSFIDG 596

Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPD 534
           L K G    A ++F EM  +   PNL TY+ +I    +    + A +L  D    G EP+
Sbjct: 597 LCKNGRTSLAFKIFHEMKKRDYFPNLCTYSSLIDGLCQEGQAEDAERLLDD----GCEPN 652

Query: 535 KVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYE 594
             TY+ ++  L   G   EA+ +   M++K   P E +Y  L+    K   V  A + ++
Sbjct: 653 VDTYTTLVRGLCGKGRCYEADQLVESMKKKGLQPSEEIYRALLVGQCKNLEVESALKIFD 712

Query: 595 AMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
           +M+  G +P +    +L+ A  +      A  + Q ML          +T+LL
Sbjct: 713 SMVTTGFQPCLSDYKALICALCKANFRQKAQCMFQTMLKKHWNSDEVVWTVLL 765



 Score =  107 bits (267), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 96/375 (25%), Positives = 159/375 (42%), Gaps = 23/375 (6%)

Query: 274 PSREMKIPAGLAPFSRHFASTGNVVESVSRILRQWKWGPLAEEALGNTNYSMDAYQANQV 333
           PS  + I +   PF         +V  +S IL    W   +E  L +    +  +    +
Sbjct: 34  PSSPLSISSNTDPFPE-------LVSKISIILSSPTWERSSE--LSHLIPKLKPHHVVNL 84

Query: 334 LKQLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQP 393
           L    +    L FF+W+ R   FKHD   + +M+  L R R F   + +   M++  C+ 
Sbjct: 85  LDTHNNTESVLRFFHWVSRTHFFKHDMSCFVSMLNRLVRDRLFVPADNVRILMIK-SCR- 142

Query: 394 NVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMY 453
           N     R+I        +N   D    +          ++ TL+    K     +  D+Y
Sbjct: 143 NEGEVKRVIQVLSE---INTTYDFGYTL---------YSFSTLLIQLGKFDMDGLGRDVY 190

Query: 454 KKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKA 513
            +M  +G+ P+ FT++ +I  L   G +Q A  +   + + G  P+  TY  +I    K 
Sbjct: 191 IEMLNSGIRPNLFTFNAMIKILCNKGKVQEAELIMGHIFHYGACPDTFTYTSLIIGHCKN 250

Query: 514 RNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVY 573
            N   A +++  M   G +P+ VTYS ++  L   G L+EA  +  EM  K   P    Y
Sbjct: 251 GNLDLAFEMFDRMVKDGCDPNSVTYSALINGLCSEGRLEEAMDMLEEMIDKGIEPTVHAY 310

Query: 574 GLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLN 633
            + +     AG   +A +    M + G  PNV T  +L+S   R G+   A  +   ML 
Sbjct: 311 TIPIVSLCDAGRSCEAVKLLGKMKKRGCGPNVQTYTALISGLSRDGKFEVAIGVYHKMLA 370

Query: 634 LGLKPSLQTYTLLLS 648
            GL P+  TY+ L++
Sbjct: 371 DGLVPTAVTYSALIN 385



 Score = 65.9 bits (159), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 57/254 (22%), Positives = 97/254 (38%), Gaps = 32/254 (12%)

Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLI 402
           AL  F W   ++G      TY  M+    +  +         +MV+ G  PNV+TY   I
Sbjct: 536 ALALF-WKMVESGNVPSSGTYNMMISGFSKTNRISEAENFCGKMVKQGLLPNVITYTSFI 594

Query: 403 HSYGRANYLNEALDVFKQMQVV-------------------------------GCEPDRV 431
               +    + A  +F +M+                                 GCEP+  
Sbjct: 595 DGLCKNGRTSLAFKIFHEMKKRDYFPNLCTYSSLIDGLCQEGQAEDAERLLDDGCEPNVD 654

Query: 432 TYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEM 491
           TY TL+      G    A  + + M+  GL P    Y  ++    K   +++A ++F  M
Sbjct: 655 TYTTLVRGLCGKGRCYEADQLVESMKKKGLQPSEEIYRALLVGQCKNLEVESALKIFDSM 714

Query: 492 VNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYL 551
           V  G  P L  Y  +I    KA   Q A  +++ M    +  D+V ++++++ L   G  
Sbjct: 715 VTTGFQPCLSDYKALICALCKANFRQKAQCMFQTMLKKHWNSDEVVWTVLLDGLLKEGET 774

Query: 552 DEAEAVFAEMRRKN 565
           D +  +   M  +N
Sbjct: 775 DLSLELLHVMESRN 788


>gi|302766715|ref|XP_002966778.1| hypothetical protein SELMODRAFT_62477 [Selaginella moellendorffii]
 gi|300166198|gb|EFJ32805.1| hypothetical protein SELMODRAFT_62477 [Selaginella moellendorffii]
          Length = 480

 Score =  148 bits (373), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 93/298 (31%), Positives = 151/298 (50%), Gaps = 3/298 (1%)

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
           +AG   +   Y  ++  L +A         L +M +  C PNVV+YN +I  Y +A  + 
Sbjct: 57  EAGLFPNAILYNNLISCLCKAGMLAEAESYLKRMPQH-CAPNVVSYNIIIDGYCKARNIE 115

Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
           +AL   ++M+ +G  P    Y +++    K G +  AMD++ +M A G  PD   ++V++
Sbjct: 116 KALAFLREMEELGHPPTPHAYSSIVQSFCKTGNVSKAMDVFAEMPAKGCEPDIVNFNVLL 175

Query: 473 NCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFE 532
           + L +A  +  A +LF  M ++GC P++VTYN MIA   K +    A+ L   M+     
Sbjct: 176 SGLWRARKIHEARELFRSMNSRGCKPDVVTYNTMIAGLCKWKKLDEAVFLLERMKQEDVS 235

Query: 533 PDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWG--KAGNVRKAW 590
           P  VTY+ +++ L     L +A  VF +M        EP Y +L+ + G  KA    +A 
Sbjct: 236 PTFVTYTTLIDHLCKFARLQQAYEVFEKMAEGPCPCTEPAYSVLILINGLCKARRPGEAK 295

Query: 591 EWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
           E ++ M   G+ P V T N+LL   L   +L DA  L   ML+    P++ TY +L+S
Sbjct: 296 EMFQEMRGRGISPTVVTYNTLLEGLLSTAKLQDAMELTYFMLDQVPAPNMFTYEILIS 353



 Score =  134 bits (338), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 94/316 (29%), Positives = 157/316 (49%), Gaps = 5/316 (1%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           G + D   +  ++  L RAR+     +L   M   GC+P+VVTYN +I    +   L+EA
Sbjct: 163 GCEPDIVNFNVLLSGLWRARKIHEARELFRSMNSRGCKPDVVTYNTMIAGLCKWKKLDEA 222

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDT---FTYSVI 471
           + + ++M+     P  VTY TLID   K   L  A ++++KM A G  P T   ++  ++
Sbjct: 223 VFLLERMKQEDVSPTFVTYTTLIDHLCKFARLQQAYEVFEKM-AEGPCPCTEPAYSVLIL 281

Query: 472 INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF 531
           IN L KA     A ++F EM  +G  P +VTYN ++         Q A++L   M +   
Sbjct: 282 INGLCKARRPGEAKEMFQEMRGRGISPTVVTYNTLLEGLLSTAKLQDAMELTYFMLDQVP 341

Query: 532 EPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWE 591
            P+  TY I++  L     ++EA  + + MR K +VP   ++ +L+    +AG +  A+E
Sbjct: 342 APNMFTYEILISSLCKTDQVEEAFKLLSAMRDKGFVPSLKIWEVLLSRLARAGRLDDAFE 401

Query: 592 WYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTY-TLLLSCC 650
            Y+ M +   +  V + N LL   LR G + +A   L+ M + G+ P   TY  L++  C
Sbjct: 402 LYKEMSRINCQQLVGSSNILLDGILRRGSVDEAKDFLKQMTDTGIVPDKFTYDKLVVGLC 461

Query: 651 TEARSPYDMGFCHELM 666
            + ++        EL+
Sbjct: 462 WQGKADQARKLVEELV 477



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 80/254 (31%), Positives = 130/254 (51%), Gaps = 2/254 (0%)

Query: 402 IHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGL 461
           I     A+ + +A  + ++M+  G  PD  ++C LI    K+G          +M  AGL
Sbjct: 1   IRKLVEADLVAQAEAIVEEMKYAGFSPDVQSHCLLIRGFFKSGSFQRGCSQLDRMLEAGL 60

Query: 462 SPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALK 521
            P+   Y+ +I+CL KAG L  A   + + + Q C PN+V+YNI+I    KARN + AL 
Sbjct: 61  FPNAILYNNLISCLCKAGMLAEAES-YLKRMPQHCAPNVVSYNIIIDGYCKARNIEKALA 119

Query: 522 LYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWG 581
             R+M+  G  P    YS +++     G + +A  VFAEM  K   PD   + +L+    
Sbjct: 120 FLREMEELGHPPTPHAYSSIVQSFCKTGNVSKAMDVFAEMPAKGCEPDIVNFNVLLSGLW 179

Query: 582 KAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQ 641
           +A  + +A E + +M   G +P+V T N++++   +  +L +A  LL+ M    + P+  
Sbjct: 180 RARKIHEARELFRSMNSRGCKPDVVTYNTMIAGLCKWKKLDEAVFLLERMKQEDVSPTFV 239

Query: 642 TYTLLLS-CCTEAR 654
           TYT L+   C  AR
Sbjct: 240 TYTTLIDHLCKFAR 253



 Score =  116 bits (291), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 81/283 (28%), Positives = 137/283 (48%), Gaps = 2/283 (0%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           G K D  TY TM+  L + ++      LL++M ++   P  VTY  LI    +   L +A
Sbjct: 198 GCKPDVVTYNTMIAGLCKWKKLDEAVFLLERMKQEDVSPTFVTYTTLIDHLCKFARLQQA 257

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIH--AKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
            +VF++M    C      Y  LI I+   KA     A +M+++M+  G+SP   TY+ ++
Sbjct: 258 YEVFEKMAEGPCPCTEPAYSVLILINGLCKARRPGEAKEMFQEMRGRGISPTVVTYNTLL 317

Query: 473 NCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFE 532
             L     LQ A +L   M++Q   PN+ TY I+I+   K    + A KL   M++ GF 
Sbjct: 318 EGLLSTAKLQDAMELTYFMLDQVPAPNMFTYEILISSLCKTDQVEEAFKLLSAMRDKGFV 377

Query: 533 PDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEW 592
           P    + +++  L   G LD+A  ++ EM R N         +L+D   + G+V +A ++
Sbjct: 378 PSLKIWEVLLSRLARAGRLDDAFELYKEMSRINCQQLVGSSNILLDGILRRGSVDEAKDF 437

Query: 593 YEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLG 635
            + M   G+ P+  T + L+      G+   A  L++ ++  G
Sbjct: 438 LKQMTDTGIVPDKFTYDKLVVGLCWQGKADQARKLVEELVRDG 480



 Score = 53.1 bits (126), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 36/121 (29%), Positives = 64/121 (52%), Gaps = 3/121 (2%)

Query: 553 EAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLL 612
           +AEA+  EM+   + PD   + LL+  + K+G+ ++     + ML+AGL PN    N+L+
Sbjct: 12  QAEAIVEEMKYAGFSPDVQSHCLLIRGFFKSGSFQRGCSQLDRMLEAGLFPNAILYNNLI 71

Query: 613 SAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARS-PYDMGFCHELMAVSGH 671
           S   + G L++A   L+ M      P++ +Y +++    +AR+    + F  E M   GH
Sbjct: 72  SCLCKAGMLAEAESYLKRMPQ-HCAPNVVSYNIIIDGYCKARNIEKALAFLRE-MEELGH 129

Query: 672 P 672
           P
Sbjct: 130 P 130



 Score = 43.5 bits (101), Expect = 0.48,   Method: Compositional matrix adjust.
 Identities = 27/86 (31%), Positives = 39/86 (45%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           R  GF      +  ++  L RA +     +L  +M R  CQ  V + N L+    R   +
Sbjct: 372 RDKGFVPSLKIWEVLLSRLARAGRLDDAFELYKEMSRINCQQLVGSSNILLDGILRRGSV 431

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLI 437
           +EA D  KQM   G  PD+ TY  L+
Sbjct: 432 DEAKDFLKQMTDTGIVPDKFTYDKLV 457


>gi|15221671|ref|NP_176495.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75169919|sp|Q9CAN6.1|PPR97_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g63070, mitochondrial; Flags: Precursor
 gi|12323265|gb|AAG51617.1|AC010795_21 unknown protein; 38394-36551 [Arabidopsis thaliana]
 gi|332195929|gb|AEE34050.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 590

 Score =  147 bits (372), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 86/267 (32%), Positives = 140/267 (52%), Gaps = 1/267 (0%)

Query: 382 LLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHA 441
           L+DQMV  G QP+ VT+  L+H   + N  +EA+ + ++M V GC+PD VTY  +I+   
Sbjct: 167 LVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLC 226

Query: 442 KAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLV 501
           K G  D+A+++  KM+   +  D   Y+ II+ L K  H+  A  LF +M  +G  P++ 
Sbjct: 227 KRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVF 286

Query: 502 TYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEM 561
           TYN +I+       +  A +L  DM      PD V ++ +++     G L EAE ++ EM
Sbjct: 287 TYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEM 346

Query: 562 -RRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQ 620
            + K+  PD   Y  L+  + K   V +  E +  M Q GL  N  T  +L+  F +   
Sbjct: 347 VKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARD 406

Query: 621 LSDAYHLLQGMLNLGLKPSLQTYTLLL 647
             +A  + + M++ G+ P + TY +LL
Sbjct: 407 CDNAQMVFKQMVSDGVHPDIMTYNILL 433



 Score =  123 bits (309), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 84/313 (26%), Positives = 155/313 (49%), Gaps = 2/313 (0%)

Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLI 402
           A   FN +  + G K D  TY  ++  L    ++   ++LL  M+     P++V +N LI
Sbjct: 269 AFDLFNKMETK-GIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALI 327

Query: 403 HSYGRANYLNEALDVFKQM-QVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGL 461
            ++ +   L EA  ++ +M +   C PD V Y TLI    K   ++  M+++++M   GL
Sbjct: 328 DAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGL 387

Query: 462 SPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALK 521
             +T TY+ +I+   +A     A  +F +MV+ G  P+++TYNI++       N ++AL 
Sbjct: 388 VGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALV 447

Query: 522 LYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWG 581
           ++  MQ    + D VTY+ ++E L   G +++   +F  +  K   P+   Y  ++  + 
Sbjct: 448 VFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFC 507

Query: 582 KAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQ 641
           + G   +A   +  M + G  PN  T N+L+ A LR G  + +  L++ M + G      
Sbjct: 508 RKGLKEEADALFVEMKEDGPLPNSGTYNTLIRARLRDGDEAASAELIKEMRSCGFAGDAS 567

Query: 642 TYTLLLSCCTEAR 654
           T+ L+ +   + R
Sbjct: 568 TFGLVTNMLHDGR 580



 Score =  113 bits (283), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 108/462 (23%), Positives = 197/462 (42%), Gaps = 41/462 (8%)

Query: 324 SMDAYQANQVLKQLQDHTV--ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINK 381
           S D  + N   K LQD  +  A+G F  + +   F      ++ ++  + +  +F  +  
Sbjct: 38  SSDDCRENLSRKVLQDLKLDDAIGLFGDMVKSRPFPSIVE-FSKLLSAIAKMNKFDLVIS 96

Query: 382 LLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHA 441
           L +QM   G   N+ TY+  I+ + R + L+ AL +  +M  +G  P  VT  +L++   
Sbjct: 97  LGEQMQNLGISHNLYTYSIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFC 156

Query: 442 KAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLV 501
               +  A+ +  +M   G  PDT T++ +++ L +      A  L   MV +GC P+LV
Sbjct: 157 HGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLV 216

Query: 502 T-----------------------------------YNIMIALQAKARNYQSALKLYRDM 526
           T                                   YN +I    K ++   A  L+  M
Sbjct: 217 TYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKM 276

Query: 527 QNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNV 586
           +  G +PD  TY+ ++  L + G   +A  + ++M  KN  PD   +  L+D + K G +
Sbjct: 277 ETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKL 336

Query: 587 RKAWEWYEAMLQAG-LRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTL 645
            +A + Y+ M+++    P+V   N+L+  F +  ++ +   + + M   GL  +  TYT 
Sbjct: 337 VEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTT 396

Query: 646 LLSCCTEARSPYDMGFCHELMAVSG-HPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSE 704
           L+    +AR   +     + M   G HP  M    +     +  NV   +  F E M   
Sbjct: 397 LIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVF-EYMQKR 455

Query: 705 DRESKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAV 746
           D +        +++ L K+G  E+   ++   + K V P+ V
Sbjct: 456 DMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVV 497



 Score =  111 bits (278), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 72/246 (29%), Positives = 125/246 (50%), Gaps = 2/246 (0%)

Query: 381 KLLDQMVRDG-CQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDI 439
           KL D+MV+   C P+VV YN LI  + +   + E ++VF++M   G   + VTY TLI  
Sbjct: 341 KLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHG 400

Query: 440 HAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPN 499
             +A   D A  ++K+M + G+ PD  TY+++++ L   G+++ A  +F  M  +    +
Sbjct: 401 FFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLD 460

Query: 500 LVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFA 559
           +VTY  MI    KA   +    L+  +   G +P+ VTY+ +M      G  +EA+A+F 
Sbjct: 461 IVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFV 520

Query: 560 EMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVG 619
           EM+    +P+   Y  L+    + G+   + E  + M   G   +  T   L++  L  G
Sbjct: 521 EMKEDGPLPNSGTYNTLIRARLRDGDEAASAELIKEMRSCGFAGDASTF-GLVTNMLHDG 579

Query: 620 QLSDAY 625
           +L  ++
Sbjct: 580 RLDKSF 585



 Score =  105 bits (263), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 87/335 (25%), Positives = 142/335 (42%), Gaps = 12/335 (3%)

Query: 335 KQLQDHTVALG-----FFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRD 389
           K L  HTV L         W R  AG   D+        +L   +   AI  L   MV+ 
Sbjct: 11  KCLHRHTVLLKGNPRTTLCWERSFAGASSDDCRENLSRKVLQDLKLDDAIG-LFGDMVKS 69

Query: 390 GCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVA 449
              P++V +++L+ +  + N  +  + + +QMQ +G   +  TY   I+   +   L +A
Sbjct: 70  RPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIFINYFCRRSQLSLA 129

Query: 450 MDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIAL 509
           + +  KM   G  P   T + ++N       +  A  L  +MV  G  P+ VT+  ++  
Sbjct: 130 LAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHG 189

Query: 510 QAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPD 569
             +      A+ L   M   G +PD VTY  V+  L   G  D A  +  +M +     D
Sbjct: 190 LFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEAD 249

Query: 570 EPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQ 629
             +Y  ++D   K  ++  A++ +  M   G++P+V T N L+S     G+ SDA  LL 
Sbjct: 250 VVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLS 309

Query: 630 GMLNLGLKPSLQTYTLLLSC------CTEARSPYD 658
            ML   + P L  +  L+          EA   YD
Sbjct: 310 DMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYD 344



 Score =  105 bits (262), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 63/202 (31%), Positives = 107/202 (52%), Gaps = 1/202 (0%)

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
           Q G   +  TYTT++    +AR       +  QMV DG  P+++TYN L+        + 
Sbjct: 384 QRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVE 443

Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
            AL VF+ MQ    + D VTY T+I+   KAG ++   D++  +   G+ P+  TY+ ++
Sbjct: 444 TALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMM 503

Query: 473 NCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFE 532
           +   + G  + A  LF EM   G +PN  TYN +I  + +  +  ++ +L ++M++ GF 
Sbjct: 504 SGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLIRARLRDGDEAASAELIKEMRSCGFA 563

Query: 533 PDKVTYSIVMEVLGHCGYLDEA 554
            D  T+ +V  +L H G LD++
Sbjct: 564 GDASTFGLVTNML-HDGRLDKS 584


>gi|226500056|ref|NP_001147821.1| pentatricopeptide repeat 2 [Zea mays]
 gi|195613946|gb|ACG28803.1| PPR2 [Zea mays]
          Length = 562

 Score =  147 bits (372), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 87/294 (29%), Positives = 146/294 (49%), Gaps = 6/294 (2%)

Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLI 402
           AL  F  L+ Q  +   E TY  ++ +LGR+ Q    ++L D+M++ GCQP    Y  LI
Sbjct: 191 ALQVFEMLKEQPFYHPKEGTYMKLIVLLGRSGQPTRAHQLFDEMLQQGCQPTPELYTALI 250

Query: 403 HSYGRANYLNEALDVFKQMQVVG-CEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGL 461
            +Y R+  L+EAL +   M+    C+PD  TY T+I     A   D+   MYK M    +
Sbjct: 251 GAYCRSCLLDEALQLLNDMKSSPLCQPDVYTYSTIIKACVDAARFDLTDTMYKDMAERSI 310

Query: 462 SPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQ-GCIPNLVTYNIMIALQAKARNYQSAL 520
           SP+T T +++++  GKAG L    ++  +M++   C P++ T NI+++L       +   
Sbjct: 311 SPNTVTQNIVLSGYGKAGRLDDMERVLSDMLDSVSCKPDVWTMNIILSLFGNRGEVELME 370

Query: 521 KLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLW 580
           + Y   +  G EP+  T +I++   G     D+  AV   MR+  +      Y  +++ +
Sbjct: 371 RWYEKFRGYGVEPETRTLNILIGAYGKRRMYDKMSAVMEHMRKLAFPWTTATYNNVIEAF 430

Query: 581 GKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNL 634
            +AG+       +  M   G+RP+  T   L+  F R GQ    +H + GM+ L
Sbjct: 431 AEAGDAGNMEHAFNQMRSEGMRPDTKTFCCLIDGFSRAGQ----FHKVVGMVKL 480



 Score = 89.0 bits (219), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 64/245 (26%), Positives = 107/245 (43%), Gaps = 3/245 (1%)

Query: 412 NEALDVFKQMQVVGC-EPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSV 470
            EAL VF+ ++      P   TY  LI +  ++G    A  ++ +M   G  P    Y+ 
Sbjct: 189 QEALQVFEMLKEQPFYHPKEGTYMKLIVLLGRSGQPTRAHQLFDEMLQQGCQPTPELYTA 248

Query: 471 IINCLGKAGHLQAAHQLFCEMVNQG-CIPNLVTYNIMIALQAKARNYQSALKLYRDMQNA 529
           +I    ++  L  A QL  +M +   C P++ TY+ +I     A  +     +Y+DM   
Sbjct: 249 LIGAYCRSCLLDEALQLLNDMKSSPLCQPDVYTYSTIIKACVDAARFDLTDTMYKDMAER 308

Query: 530 GFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRK-NWVPDEPVYGLLVDLWGKAGNVRK 588
              P+ VT +IV+   G  G LD+ E V ++M    +  PD     +++ L+G  G V  
Sbjct: 309 SISPNTVTQNIVLSGYGKAGRLDDMERVLSDMLDSVSCKPDVWTMNIILSLFGNRGEVEL 368

Query: 589 AWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
              WYE     G+ P   T N L+ A+ +         +++ M  L    +  TY  ++ 
Sbjct: 369 MERWYEKFRGYGVEPETRTLNILIGAYGKRRMYDKMSAVMEHMRKLAFPWTTATYNNVIE 428

Query: 649 CCTEA 653
              EA
Sbjct: 429 AFAEA 433



 Score = 70.9 bits (172), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 48/205 (23%), Positives = 95/205 (46%), Gaps = 2/205 (0%)

Query: 357 KHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALD 416
           K D  T   ++ + G   +   + +  ++    G +P   T N LI +YG+    ++   
Sbjct: 347 KPDVWTMNIILSLFGNRGEVELMERWYEKFRGYGVEPETRTLNILIGAYGKRRMYDKMSA 406

Query: 417 VFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLG 476
           V + M+ +       TY  +I+  A+AG        + +M++ G+ PDT T+  +I+   
Sbjct: 407 VMEHMRKLAFPWTTATYNNVIEAFAEAGDAGNMEHAFNQMRSEGMRPDTKTFCCLIDGFS 466

Query: 477 KAGHLQAAHQLFCEMVNQGCIP-NLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDK 535
           +AG       +  ++  +  +P N   +N ++   A+A +     +++R M++   EPD 
Sbjct: 467 RAGQFHKVVGMV-KLAERLDVPVNTPFHNAVLGACARADDLVEMERVFRRMKHTQCEPDA 525

Query: 536 VTYSIVMEVLGHCGYLDEAEAVFAE 560
            TYSI++E     G  D+  A+  E
Sbjct: 526 STYSILVEAYRKEGMTDKIYALHQE 550



 Score = 69.7 bits (169), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 37/156 (23%), Positives = 72/156 (46%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           R  G + +  T   ++G  G+ R +  ++ +++ M +        TYN +I ++  A   
Sbjct: 377 RGYGVEPETRTLNILIGAYGKRRMYDKMSAVMEHMRKLAFPWTTATYNNVIEAFAEAGDA 436

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
                 F QM+  G  PD  T+C LID  ++AG     + M K  +   +  +T  ++ +
Sbjct: 437 GNMEHAFNQMRSEGMRPDTKTFCCLIDGFSRAGQFHKVVGMVKLAERLDVPVNTPFHNAV 496

Query: 472 INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMI 507
           +    +A  L    ++F  M +  C P+  TY+I++
Sbjct: 497 LGACARADDLVEMERVFRRMKHTQCEPDASTYSILV 532



 Score = 53.1 bits (126), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 34/120 (28%), Positives = 58/120 (48%), Gaps = 3/120 (2%)

Query: 347 FNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYG 406
           FN +R + G + D  T+  ++    RA QF  +  ++    R     N   +N ++ +  
Sbjct: 443 FNQMRSE-GMRPDTKTFCCLIDGFSRAGQFHKVVGMVKLAERLDVPVNTPFHNAVLGACA 501

Query: 407 RANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTF 466
           RA+ L E   VF++M+   CEPD  TY  L++ + K G  D    ++++  A  L P  F
Sbjct: 502 RADDLVEMERVFRRMKHTQCEPDASTYSILVEAYRKEGMTDKIYALHQENPA--LVPADF 559


>gi|9758456|dbj|BAB08985.1| membrane-associated salt-inducible protein-like [Arabidopsis
           thaliana]
          Length = 949

 Score =  147 bits (372), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 85/319 (26%), Positives = 163/319 (51%), Gaps = 3/319 (0%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           ++ G KH+  TY+ M+    + + +     + + MV++G +P+V+ YN +I ++     +
Sbjct: 511 KEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGMKPDVILYNNIISAFCGMGNM 570

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
           + A+   K+MQ +   P   T+  +I  +AK+G +  +++++  M+  G  P   T++ +
Sbjct: 571 DRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGL 630

Query: 472 INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF 531
           IN L +    + A ++  EM   G   N  TY  ++   A   +   A + +  +QN G 
Sbjct: 631 INGLVEK---RQAVEILDEMTLAGVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGL 687

Query: 532 EPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWE 591
           + D  TY  +++     G +  A AV  EM  +N   +  VY +L+D W + G+V +A +
Sbjct: 688 DVDIFTYEALLKACCKSGRMQSALAVTKEMSARNIPRNSFVYNILIDGWARRGDVWEAAD 747

Query: 592 WYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCT 651
             + M + G++P++ T  S +SA  + G ++ A   ++ M  LG+KP+++TYT L+    
Sbjct: 748 LIQQMKKEGVKPDIHTYTSFISACSKAGDMNRATQTIEEMEALGVKPNIKTYTTLIKGWA 807

Query: 652 EARSPYDMGFCHELMAVSG 670
            A  P     C+E M   G
Sbjct: 808 RASLPEKALSCYEEMKAMG 826



 Score =  119 bits (297), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 69/259 (26%), Positives = 127/259 (49%), Gaps = 4/259 (1%)

Query: 392 QPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMD 451
           +P+   +  ++  YGR   ++ A + F++M+  G  P    Y +LI  +A    +D A+ 
Sbjct: 306 KPSRTEFGLMVKFYGRRGDMHRARETFERMRARGITPTSRIYTSLIHAYAVGRDMDEALS 365

Query: 452 MYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQA 511
             +KM+  G+     TYSVI+    KAGH +AA   F E        N   Y  +I    
Sbjct: 366 CVRKMKEEGIEMSLVTYSVIVGGFSKAGHAEAADYWFDEAKRIHKTLNASIYGKIIYAHC 425

Query: 512 KARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEA--VFAEMRRKNWVPD 569
           +  N + A  L R+M+  G +     Y  +M+  G+    DE +   VF  ++   + P 
Sbjct: 426 QTCNMERAEALVREMEEEGIDAPIAIYHTMMD--GYTMVADEKKGLVVFKRLKECGFTPT 483

Query: 570 EPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQ 629
              YG L++L+ K G + KA E    M + G++ N+ T + +++ F+++   ++A+ + +
Sbjct: 484 VVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFE 543

Query: 630 GMLNLGLKPSLQTYTLLLS 648
            M+  G+KP +  Y  ++S
Sbjct: 544 DMVKEGMKPDVILYNNIIS 562



 Score =  112 bits (280), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 69/296 (23%), Positives = 140/296 (47%), Gaps = 3/296 (1%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           ++ G +    TY+ +VG   +A    A +   D+  R     N   Y ++I+++ +   +
Sbjct: 371 KEEGIEMSLVTYSVIVGGFSKAGHAEAADYWFDEAKRIHKTLNASIYGKIIYAHCQTCNM 430

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
             A  + ++M+  G +     Y T++D +         + ++K+++  G +P   TY  +
Sbjct: 431 ERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKECGFTPTVVTYGCL 490

Query: 472 INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF 531
           IN   K G +  A ++   M  +G   NL TY++MI    K +++ +A  ++ DM   G 
Sbjct: 491 INLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGM 550

Query: 532 EPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWE 591
           +PD + Y+ ++      G +D A     EM++    P    +  ++  + K+G++R++ E
Sbjct: 551 KPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSLE 610

Query: 592 WYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
            ++ M + G  P V T N L++  +   Q   A  +L  M   G+  +  TYT ++
Sbjct: 611 VFDMMRRCGCVPTVHTFNGLINGLVEKRQ---AVEILDEMTLAGVSANEHTYTKIM 663



 Score =  112 bits (280), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 76/288 (26%), Positives = 132/288 (45%), Gaps = 8/288 (2%)

Query: 350 LRRQAGFKHDEHTYTTMVGILGRARQFGAINK---LLDQMVRDGCQPNVVTYNRLIHSYG 406
           ++     +H   T T M  I G A+  G + +   + D M R GC P V T+N LI+   
Sbjct: 577 VKEMQKLRHRPTTRTFMPIIHGYAKS-GDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLV 635

Query: 407 RANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTF 466
                 +A+++  +M + G   +  TY  ++  +A  G    A + + ++Q  GL  D F
Sbjct: 636 EKR---QAVEILDEMTLAGVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIF 692

Query: 467 TYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDM 526
           TY  ++    K+G +Q+A  +  EM  +    N   YNI+I   A+  +   A  L + M
Sbjct: 693 TYEALLKACCKSGRMQSALAVTKEMSARNIPRNSFVYNILIDGWARRGDVWEAADLIQQM 752

Query: 527 QNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNV 586
           +  G +PD  TY+  +      G ++ A     EM      P+   Y  L+  W +A   
Sbjct: 753 KKEGVKPDIHTYTSFISACSKAGDMNRATQTIEEMEALGVKPNIKTYTTLIKGWARASLP 812

Query: 587 RKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNL 634
            KA   YE M   G++P+    + LL++ L    +++AY +  G++ +
Sbjct: 813 EKALSCYEEMKAMGIKPDKAVYHCLLTSLLSRASIAEAY-IYSGVMTI 859



 Score =  101 bits (251), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 64/285 (22%), Positives = 132/285 (46%)

Query: 363 YTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQ 422
           +  MV   GR        +  ++M   G  P    Y  LIH+Y     ++EAL   ++M+
Sbjct: 312 FGLMVKFYGRRGDMHRARETFERMRARGITPTSRIYTSLIHAYAVGRDMDEALSCVRKMK 371

Query: 423 VVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQ 482
             G E   VTY  ++   +KAG  + A   + + +    + +   Y  II    +  +++
Sbjct: 372 EEGIEMSLVTYSVIVGGFSKAGHAEAADYWFDEAKRIHKTLNASIYGKIIYAHCQTCNME 431

Query: 483 AAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVM 542
            A  L  EM  +G    +  Y+ M+       + +  L +++ ++  GF P  VTY  ++
Sbjct: 432 RAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKECGFTPTVVTYGCLI 491

Query: 543 EVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLR 602
            +    G + +A  V   M+ +    +   Y ++++ + K  +   A+  +E M++ G++
Sbjct: 492 NLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGMK 551

Query: 603 PNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
           P+V   N+++SAF  +G +  A   ++ M  L  +P+ +T+  ++
Sbjct: 552 PDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPII 596


>gi|302758676|ref|XP_002962761.1| hypothetical protein SELMODRAFT_165305 [Selaginella moellendorffii]
 gi|300169622|gb|EFJ36224.1| hypothetical protein SELMODRAFT_165305 [Selaginella moellendorffii]
          Length = 707

 Score =  147 bits (372), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 105/383 (27%), Positives = 185/383 (48%), Gaps = 16/383 (4%)

Query: 354 AGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNE 413
           +GF  D  TY+ +   L +  +     +L+ +M  +GC PN+VTYN LI    +A+   +
Sbjct: 109 SGFVPDVVTYSILADGLCKRGRIDEAFELVKEMSGNGCTPNLVTYNTLIDGLCKASKTEK 168

Query: 414 ALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIIN 473
           A ++ + +   G  PD VTY  ++D   K G LD A+ M + M   G +P   TY+ ++ 
Sbjct: 169 AYELLETLVSSGFVPDVVTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALME 228

Query: 474 CLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEP 533
            L + G +  AH +F EMV++ C  + + Y  ++    K+   + A K+   ++     P
Sbjct: 229 GLCRTGRVDEAHHIFKEMVSKDCTADALAYVSLVNGYCKSSRTKEAQKVVDGIRGT---P 285

Query: 534 DKVTYSIVMEVLGHC--GYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWE 591
               Y+ +M+  G+C  G LDE   VF +M  +  VP+   Y +++D   K G V +A+ 
Sbjct: 286 YIDVYNALMD--GYCKEGRLDEIPNVFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFP 343

Query: 592 WYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTY-TLLLSCC 650
           + E+M  AG  P+V + N ++    +  +  +A  +L  M+  G+ P   TY TL+   C
Sbjct: 344 FLESMHSAGCVPDVVSYNIIIDGLFKASKPKEARQVLDQMIQAGIPPDAVTYNTLMAQFC 403

Query: 651 TEARSPYDMGFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRE--- 707
            E R    +G    ++     P ++   ++ S    G +  + +G   E+MH   R    
Sbjct: 404 KEERFDDAVGILKNMIKAGVDPDNVTYNTLIS----GLSQTNRLGDAYELMHEMLRNGCV 459

Query: 708 -SKRGLVDAVVDFLHKSGLKEEA 729
            S     + ++D L K G  ++A
Sbjct: 460 VSACTTYNTIIDRLCKEGCLKQA 482



 Score =  147 bits (370), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 115/449 (25%), Positives = 197/449 (43%), Gaps = 18/449 (4%)

Query: 359 DEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVF 418
           D  TY  ++  L +A +    +++L +MV  G  P+ VT+N ++    +A     A  + 
Sbjct: 9   DVFTYNILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGKFERAHSLL 68

Query: 419 KQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKA 478
             M    C P   TY TLI    K   +D A  +  +  ++G  PD  TYS++ + L K 
Sbjct: 69  AVMAERNCRPSCCTYNTLISGLCKQQNVDRAKTLVDEFVSSGFVPDVVTYSILADGLCKR 128

Query: 479 GHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTY 538
           G +  A +L  EM   GC PNLVTYN +I    KA   + A +L   + ++GF PD VTY
Sbjct: 129 GRIDEAFELVKEMSGNGCTPNLVTYNTLIDGLCKASKTEKAYELLETLVSSGFVPDVVTY 188

Query: 539 SIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQ 598
           +I+++ L   G LD+A  +   M ++   P    Y  L++   + G V +A   ++ M+ 
Sbjct: 189 TIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAHHIFKEMVS 248

Query: 599 AGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS-CCTEARSPY 657
                +     SL++ + +  +  +A  ++ G+      P +  Y  L+   C E R   
Sbjct: 249 KDCTADALAYVSLVNGYCKSSRTKEAQKVVDGIRG---TPYIDVYNALMDGYCKEGRLD- 304

Query: 658 DMGFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRESKRGLVDAVV 717
           ++    E MA  G   ++   ++   G       D    FLE MHS          + ++
Sbjct: 305 EIPNVFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHSAGCVPDVVSYNIII 364

Query: 718 DFLHKSGLKEEAGSVWEVAAQKNVYPDAVKEKGMSYWLINLHVMSDGTAVIALSRTLAWF 777
           D L K+   +EA  V +   Q  + PDAV    +           D   ++         
Sbjct: 365 DGLFKASKPKEARQVLDQMIQAGIPPDAVTYNTLMAQFCKEERFDDAVGIL--------- 415

Query: 778 RKQMLISGVGPSRI---DIVTGWGRRSRV 803
            K M+ +GV P  +    +++G  + +R+
Sbjct: 416 -KNMIKAGVDPDNVTYNTLISGLSQTNRL 443



 Score =  142 bits (358), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 80/220 (36%), Positives = 117/220 (53%)

Query: 428 PDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQL 487
           PD  TY  LID   KA   D A +M  +M   G++PDT T++ I++ L KAG  + AH L
Sbjct: 8   PDVFTYNILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGKFERAHSL 67

Query: 488 FCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGH 547
              M  + C P+  TYN +I+   K +N   A  L  +  ++GF PD VTYSI+ + L  
Sbjct: 68  LAVMAERNCRPSCCTYNTLISGLCKQQNVDRAKTLVDEFVSSGFVPDVVTYSILADGLCK 127

Query: 548 CGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPT 607
            G +DEA  +  EM      P+   Y  L+D   KA    KA+E  E ++ +G  P+V T
Sbjct: 128 RGRIDEAFELVKEMSGNGCTPNLVTYNTLIDGLCKASKTEKAYELLETLVSSGFVPDVVT 187

Query: 608 CNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
              ++    + G+L  A  +++GML  G  PS+ TYT L+
Sbjct: 188 YTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALM 227



 Score =  127 bits (318), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 85/289 (29%), Positives = 139/289 (48%), Gaps = 5/289 (1%)

Query: 385 QMVRDGCQ--PNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAK 442
           Q V DG +  P +  YN L+  Y +   L+E  +VF+ M   GC P+  TY  ++D   K
Sbjct: 275 QKVVDGIRGTPYIDVYNALMDGYCKEGRLDEIPNVFEDMACRGCVPNIKTYNIVMDGLCK 334

Query: 443 AGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVT 502
            G +D A    + M +AG  PD  +Y++II+ L KA   + A Q+  +M+  G  P+ VT
Sbjct: 335 HGKVDEAFPFLESMHSAGCVPDVVSYNIIIDGLFKASKPKEARQVLDQMIQAGIPPDAVT 394

Query: 503 YNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMR 562
           YN ++A   K   +  A+ + ++M  AG +PD VTY+ ++  L     L +A  +  EM 
Sbjct: 395 YNTLMAQFCKEERFDDAVGILKNMIKAGVDPDNVTYNTLISGLSQTNRLGDAYELMHEML 454

Query: 563 RKNWVPDE-PVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQL 621
           R   V      Y  ++D   K G +++A    + M   G+  N  T N  +    + G+L
Sbjct: 455 RNGCVVSACTTYNTIIDRLCKEGCLKQALLLMDHMTGHGVEANTVTYNIFIDRLCKEGRL 514

Query: 622 SDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGFCHELMAVSG 670
            +A  LL  M    L+  +   T+++  C   +         E++AV G
Sbjct: 515 DEASSLLSEMDT--LRDEVSYTTVIIGLCKAEQLDRASKLAREMVAVKG 561



 Score =  125 bits (315), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 91/300 (30%), Positives = 140/300 (46%), Gaps = 34/300 (11%)

Query: 382 LLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHA 441
            L+ M   GC P+VV+YN +I    +A+   EA  V  QM   G  PD VTY TL+    
Sbjct: 344 FLESMHSAGCVPDVVSYNIIIDGLFKASKPKEARQVLDQMIQAGIPPDAVTYNTLMAQFC 403

Query: 442 KAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPN-L 500
           K    D A+ + K M  AG+ PD  TY+ +I+ L +   L  A++L  EM+  GC+ +  
Sbjct: 404 KEERFDDAVGILKNMIKAGVDPDNVTYNTLISGLSQTNRLGDAYELMHEMLRNGCVVSAC 463

Query: 501 VTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAE 560
            TYN +I    K    + AL L   M   G E + VTY+I ++ L   G LDEA ++ +E
Sbjct: 464 TTYNTIIDRLCKEGCLKQALLLMDHMTGHGVEANTVTYNIFIDRLCKEGRLDEASSLLSE 523

Query: 561 MR----------------------RKNWVPDEPV-----------YGLLVDLWGKAGNVR 587
           M                       R + +  E V           + LL+D + K   + 
Sbjct: 524 MDTLRDEVSYTTVIIGLCKAEQLDRASKLAREMVAVKGLCITSHTFNLLIDAFTKTKRLD 583

Query: 588 KAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
           +A    E M+Q G  P+V T N +++   ++ ++  A+ L   M   G+  S  +YT+L+
Sbjct: 584 EALTLLELMVQRGCSPSVITYNMVITCLCKLDKVDKAWELFDEMAVRGIVASSVSYTVLI 643



 Score =  107 bits (268), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 79/281 (28%), Positives = 127/281 (45%), Gaps = 5/281 (1%)

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
           QAG   D  TY T++    +  +F     +L  M++ G  P+ VTYN LI    + N L 
Sbjct: 385 QAGIPPDAVTYNTLMAQFCKEERFDDAVGILKNMIKAGVDPDNVTYNTLISGLSQTNRLG 444

Query: 413 EALDVFKQMQVVGCEPDR-VTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
           +A ++  +M   GC      TY T+ID   K G L  A+ +   M   G+  +T TY++ 
Sbjct: 445 DAYELMHEMLRNGCVVSACTTYNTIIDRLCKEGCLKQALLLMDHMTGHGVEANTVTYNIF 504

Query: 472 INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNA-G 530
           I+ L K G L  A  L  EM     + + V+Y  +I    KA     A KL R+M    G
Sbjct: 505 IDRLCKEGRLDEASSLLSEMDT---LRDEVSYTTVIIGLCKAEQLDRASKLAREMVAVKG 561

Query: 531 FEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAW 590
                 T++++++       LDEA  +   M ++   P    Y +++    K   V KAW
Sbjct: 562 LCITSHTFNLLIDAFTKTKRLDEALTLLELMVQRGCSPSVITYNMVITCLCKLDKVDKAW 621

Query: 591 EWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGM 631
           E ++ M   G+  +  +   L+      G+  +A  +L+ M
Sbjct: 622 ELFDEMAVRGIVASSVSYTVLIYGLCGQGRGKEALQVLEEM 662



 Score = 99.4 bits (246), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 81/281 (28%), Positives = 126/281 (44%), Gaps = 5/281 (1%)

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPN-VVTYNRLIHSYGRANYL 411
           +AG   D  TY T++  L +  + G   +L+ +M+R+GC  +   TYN +I    +   L
Sbjct: 420 KAGVDPDNVTYNTLISGLSQTNRLGDAYELMHEMLRNGCVVSACTTYNTIIDRLCKEGCL 479

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
            +AL +   M   G E + VTY   ID   K G LD A  +  +M       D  +Y+ +
Sbjct: 480 KQALLLMDHMTGHGVEANTVTYNIFIDRLCKEGRLDEASSLLSEMDTL---RDEVSYTTV 536

Query: 472 INCLGKAGHLQAAHQLFCEMVN-QGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAG 530
           I  L KA  L  A +L  EMV  +G      T+N++I    K +    AL L   M   G
Sbjct: 537 IIGLCKAEQLDRASKLAREMVAVKGLCITSHTFNLLIDAFTKTKRLDEALTLLELMVQRG 596

Query: 531 FEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAW 590
             P  +TY++V+  L     +D+A  +F EM  +  V     Y +L+      G  ++A 
Sbjct: 597 CSPSVITYNMVITCLCKLDKVDKAWELFDEMAVRGIVASSVSYTVLIYGLCGQGRGKEAL 656

Query: 591 EWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGM 631
           +  E M  +    +   C  L  A    G+  +A  LL+ M
Sbjct: 657 QVLEEMASSDCEIDDLKCRKLYLALRGQGRGEEAAELLRRM 697


>gi|255660794|gb|ACU25566.1| pentatricopeptide repeat-containing protein [Verbena montevidensis]
          Length = 418

 Score =  147 bits (372), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 84/279 (30%), Positives = 151/279 (54%)

Query: 370 LGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPD 429
           L + + F  +    ++ +  G   ++  +N L+HS+ +   +  A  VF  +      P 
Sbjct: 111 LMKLKYFKLVWGFYEESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPS 170

Query: 430 RVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFC 489
            V++ TL++ + K G LD    +   MQ +G+ PD +TYSV+IN L K   +  A+ LF 
Sbjct: 171 VVSFNTLMNGYIKLGDLDEGFRLKNAMQVSGVQPDVYTYSVLINGLCKESKMDDANVLFD 230

Query: 490 EMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCG 549
           EM+++G +PN VT+  +I    K      A+++Y+ M +    PD +TY+ ++  L   G
Sbjct: 231 EMLDKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKG 290

Query: 550 YLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCN 609
            L +A+ +  EM  K   PD+  Y  L+D   K G++  A+E+ + M++  +R +     
Sbjct: 291 DLKQAQDLIDEMIMKGLXPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYT 350

Query: 610 SLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
           +L+S   + G+  DA  +L+ MLN+GLKP + TYT++++
Sbjct: 351 ALISGLCQEGRSVDAEKMLREMLNVGLKPEIGTYTMIIN 389



 Score =  121 bits (304), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 72/227 (31%), Positives = 121/227 (53%)

Query: 381 KLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIH 440
           +L + M   G QP+V TY+ LI+   + + +++A  +F +M   G  P+ VT+ TLID H
Sbjct: 192 RLKNAMQVSGVQPDVYTYSVLINGLCKESKMDDANVLFDEMLDKGLVPNGVTFTTLIDGH 251

Query: 441 AKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNL 500
            K G +D+AM++YK+M +  LSPD  TY+ +I  L K G L+ A  L  EM+ +G  P+ 
Sbjct: 252 CKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLXPDK 311

Query: 501 VTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAE 560
           +TY  +I    K  + ++A +  + M       D V Y+ ++  L   G   +AE +  E
Sbjct: 312 ITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLRE 371

Query: 561 MRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPT 607
           M      P+   Y ++++ + K G+V    +  + M + G  P+V T
Sbjct: 372 MLNVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYMPSVVT 418



 Score = 53.1 bits (126), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 33/139 (23%), Positives = 69/139 (49%), Gaps = 1/139 (0%)

Query: 517 QSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLL 576
           + A++ YR  +   F     T   V+E L    Y       + E     +      + +L
Sbjct: 83  RDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFYEESLECGYPASLYFFNIL 142

Query: 577 VDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGL 636
           +  + K G +R A   ++A+ +  LRP+V + N+L++ ++++G L + + L   M   G+
Sbjct: 143 MHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQVSGV 202

Query: 637 KPSLQTYTLLLS-CCTEAR 654
           +P + TY++L++  C E++
Sbjct: 203 QPDVYTYSVLINGLCKESK 221


>gi|168023641|ref|XP_001764346.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162684498|gb|EDQ70900.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 978

 Score =  147 bits (372), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 89/317 (28%), Positives = 159/317 (50%), Gaps = 3/317 (0%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           G K D   YT+++    +A +   + ++  +M   G + NV T+  +I    RA  L +A
Sbjct: 325 GLKADCMFYTSLISACAKAGKVDLLFQIFHEMEVAGIEANVHTFGAMIDGCARAGQLPKA 384

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAG--LSPDTFTYSVII 472
              +  M     +PDRV + TLI+   +AG +  A D+   M+A    + PD  TY  +I
Sbjct: 385 FGAYGIMISKNVKPDRVIFNTLINACTRAGAVQRAFDVLTDMKAEATPIKPDHVTYGALI 444

Query: 473 NCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFE 532
           +   +AG +  A +++  M       +   Y  ++   ++  N   AL +Y D++  G +
Sbjct: 445 SACARAGEVDRALEVYQNMRESNVKGSPACYTAVVHACSQKGNVDYALLVYDDLKKDGVK 504

Query: 533 PDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEW 592
           PD+V +S +++  GH   +++A ++ A M+++   P   VY  L+ +    GN  KA E 
Sbjct: 505 PDEVFFSALVDAAGHAQDIEKAFSIIANMKKEGLKPGAVVYSSLMGVCSNLGNWEKALEV 564

Query: 593 YEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTE 652
           Y+ +  +GL+P V T N+L++A     Q + A  +LQ + N G+ P+  +Y++LL  C E
Sbjct: 565 YQDIRSSGLQPTVSTFNALMTALCEANQFTRALSILQDVKNSGIMPNQISYSILLRAC-E 623

Query: 653 ARSPYDMGFCHELMAVS 669
                DM     + A+S
Sbjct: 624 KEKMADMALDLYMTALS 640



 Score =  116 bits (291), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 70/295 (23%), Positives = 133/295 (45%), Gaps = 37/295 (12%)

Query: 354 AGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNE 413
           AG + + HT+  M+    RA Q          M+    +P+ V +N LI++  RA  +  
Sbjct: 359 AGIEANVHTFGAMIDGCARAGQLPKAFGAYGIMISKNVKPDRVIFNTLINACTRAGAVQR 418

Query: 414 ALDVFKQM--QVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAA------------ 459
           A DV   M  +    +PD VTY  LI   A+AG +D A+++Y+ M+ +            
Sbjct: 419 AFDVLTDMKAEATPIKPDHVTYGALISACARAGEVDRALEVYQNMRESNVKGSPACYTAV 478

Query: 460 -----------------------GLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGC 496
                                  G+ PD   +S +++  G A  ++ A  +   M  +G 
Sbjct: 479 VHACSQKGNVDYALLVYDDLKKDGVKPDEVFFSALVDAAGHAQDIEKAFSIIANMKKEGL 538

Query: 497 IPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEA 556
            P  V Y+ ++ + +   N++ AL++Y+D++++G +P   T++ +M  L        A +
Sbjct: 539 KPGAVVYSSLMGVCSNLGNWEKALEVYQDIRSSGLQPTVSTFNALMTALCEANQFTRALS 598

Query: 557 VFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSL 611
           +  +++    +P++  Y +L+    K      A + Y   L  G++PNV  C+S+
Sbjct: 599 ILQDVKNSGIMPNQISYSILLRACEKEKMADMALDLYMTALSEGIKPNVGICDSI 653



 Score =  109 bits (272), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 82/342 (23%), Positives = 148/342 (43%), Gaps = 10/342 (2%)

Query: 312 PLAEEALGNTNYSMDAYQANQVLKQLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILG 371
           PL  E   N  + +D Y +     +++D    LG  +   + A  K +   +       G
Sbjct: 220 PLKLET--NIKFYIDVYASMLKAGRIKDCLKLLGEMDKAGKLARMKVNHSKFYEACKARG 277

Query: 372 RARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRV 431
                 A  KL+ +         +  Y  L+     A  ++ AL V   ++  G + D +
Sbjct: 278 SVEDAFAFAKLMREF------STLQHYTMLLSVCCHAKDIDGALRVLALLESRGLKADCM 331

Query: 432 TYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEM 491
            Y +LI   AKAG +D+   ++ +M+ AG+  +  T+  +I+   +AG L  A   +  M
Sbjct: 332 FYTSLISACAKAGKVDLLFQIFHEMEVAGIEANVHTFGAMIDGCARAGQLPKAFGAYGIM 391

Query: 492 VNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAG--FEPDKVTYSIVMEVLGHCG 549
           +++   P+ V +N +I    +A   Q A  +  DM+      +PD VTY  ++      G
Sbjct: 392 ISKNVKPDRVIFNTLINACTRAGAVQRAFDVLTDMKAEATPIKPDHVTYGALISACARAG 451

Query: 550 YLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCN 609
            +D A  V+  MR  N       Y  +V    + GNV  A   Y+ + + G++P+    +
Sbjct: 452 EVDRALEVYQNMRESNVKGSPACYTAVVHACSQKGNVDYALLVYDDLKKDGVKPDEVFFS 511

Query: 610 SLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCT 651
           +L+ A      +  A+ ++  M   GLKP    Y+ L+  C+
Sbjct: 512 ALVDAAGHAQDIEKAFSIIANMKKEGLKPGAVVYSSLMGVCS 553



 Score = 59.7 bits (143), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 35/158 (22%), Positives = 77/158 (48%), Gaps = 1/158 (0%)

Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLI 402
           AL  ++ L++  G K DE  ++ +V   G A+       ++  M ++G +P  V Y+ L+
Sbjct: 491 ALLVYDDLKKD-GVKPDEVFFSALVDAAGHAQDIEKAFSIIANMKKEGLKPGAVVYSSLM 549

Query: 403 HSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLS 462
                     +AL+V++ ++  G +P   T+  L+    +A     A+ + + ++ +G+ 
Sbjct: 550 GVCSNLGNWEKALEVYQDIRSSGLQPTVSTFNALMTALCEANQFTRALSILQDVKNSGIM 609

Query: 463 PDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNL 500
           P+  +YS+++    K      A  L+   +++G  PN+
Sbjct: 610 PNQISYSILLRACEKEKMADMALDLYMTALSEGIKPNV 647



 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 46/205 (22%), Positives = 83/205 (40%), Gaps = 23/205 (11%)

Query: 450 MDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVN-QGCIPNLVTYNIMIA 508
           +D+Y  M  AG   D       ++  GK   ++  H  F E    +G + +         
Sbjct: 231 IDVYASMLKAGRIKDCLKLLGEMDKAGKLARMKVNHSKFYEACKARGSVED--------- 281

Query: 509 LQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVP 568
               A  +   ++ +  +Q+         Y++++ V  H   +D A  V A +  +    
Sbjct: 282 ----AFAFAKLMREFSTLQH---------YTMLLSVCCHAKDIDGALRVLALLESRGLKA 328

Query: 569 DEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLL 628
           D   Y  L+    KAG V   ++ +  M  AG+  NV T  +++    R GQL  A+   
Sbjct: 329 DCMFYTSLISACAKAGKVDLLFQIFHEMEVAGIEANVHTFGAMIDGCARAGQLPKAFGAY 388

Query: 629 QGMLNLGLKPSLQTYTLLLSCCTEA 653
             M++  +KP    +  L++ CT A
Sbjct: 389 GIMISKNVKPDRVIFNTLINACTRA 413


>gi|255764587|gb|ACU33853.1| PPR1 protein [Capsicum annuum]
          Length = 577

 Score =  147 bits (372), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 88/298 (29%), Positives = 155/298 (52%), Gaps = 5/298 (1%)

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDG-CQPNVVTYNRLIHSYGRANYL 411
           + G   +  T+ T++G L    +      L  ++VR+  C+PN V Y  +++   +  + 
Sbjct: 125 KTGIPFNVVTFNTLLGGLFAENKVTDAVVLFKKLVREKICEPNEVMYGTVMNGLSKRGHT 184

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
            + L + + M+    +PD  TY  +ID   K   LD A+++  +M+   + P+ FTY+ +
Sbjct: 185 EKTLSLLRIMEQGNTKPDVRTYSIVIDALCKDINLDAAINLLNEMKQKNIPPNIFTYNSL 244

Query: 472 INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF 531
           I+ L K G  +    L  EMVN    PN+ T++I+I    K    + A ++ R M   G 
Sbjct: 245 IDGLCKLGQWEKVKTLLSEMVNLNINPNVHTFSILIDGLCKEGKVEDADEVMRHMIEKGV 304

Query: 532 EPDKVTYSIVMEVLGHC--GYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKA 589
           EPD +TYS +M+  G+C  G +D A  VF  +R K   P+   Y +L++ + K  N+ KA
Sbjct: 305 EPDIITYSAIMD--GYCLRGQVDRARRVFNVLRDKGIKPNIFSYSILINGYCKKKNLAKA 362

Query: 590 WEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
            + +  + Q GL+P+  T +++L   + VG++ DA  +   ML +G  P +  ++ LL
Sbjct: 363 MQLFGEISQKGLKPDTVTYSTILHGLIEVGRIGDAKKIFDEMLRVGPTPDICLHSTLL 420



 Score =  130 bits (327), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 79/315 (25%), Positives = 154/315 (48%), Gaps = 11/315 (3%)

Query: 350 LRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRAN 409
           +  Q   K D  TY+ ++  L +     A   LL++M +    PN+ TYN LI    +  
Sbjct: 193 IMEQGNTKPDVRTYSIVIDALCKDINLDAAINLLNEMKQKNIPPNIFTYNSLIDGLCKLG 252

Query: 410 YLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYS 469
              +   +  +M  +   P+  T+  LID   K G ++ A ++ + M   G+ PD  TYS
Sbjct: 253 QWEKVKTLLSEMVNLNINPNVHTFSILIDGLCKEGKVEDADEVMRHMIEKGVEPDIITYS 312

Query: 470 VIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNA 529
            I++     G +  A ++F  + ++G  PN+ +Y+I+I    K +N   A++L+ ++   
Sbjct: 313 AIMDGYCLRGQVDRARRVFNVLRDKGIKPNIFSYSILINGYCKKKNLAKAMQLFGEISQK 372

Query: 530 GFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKA 589
           G +PD VTYS ++  L   G + +A+ +F EM R    PD  ++  L+  + K G V +A
Sbjct: 373 GLKPDTVTYSTILHGLIEVGRIGDAKKIFDEMLRVGPTPDICLHSTLLFGYFKYGLVEEA 432

Query: 590 WEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSC 649
              +  + +     N+     +++   +  ++ +A+ + + + ++GL P ++TY ++++ 
Sbjct: 433 MLLFSKLERNREDTNISFYTVVINGLCKNDRVREAHAIFEKLPSIGLIPDVRTYNVMIT- 491

Query: 650 CTEARSPYDMGFCHE 664
                     GFC E
Sbjct: 492 ----------GFCRE 496



 Score =  108 bits (270), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 68/299 (22%), Positives = 143/299 (47%)

Query: 361 HTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQ 420
           HT++ ++  L +  +    ++++  M+  G +P+++TY+ ++  Y     ++ A  VF  
Sbjct: 274 HTFSILIDGLCKEGKVEDADEVMRHMIEKGVEPDIITYSAIMDGYCLRGQVDRARRVFNV 333

Query: 421 MQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGH 480
           ++  G +P+  +Y  LI+ + K   L  AM ++ ++   GL PDT TYS I++ L + G 
Sbjct: 334 LRDKGIKPNIFSYSILINGYCKKKNLAKAMQLFGEISQKGLKPDTVTYSTILHGLIEVGR 393

Query: 481 LQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSI 540
           +  A ++F EM+  G  P++  ++ ++    K    + A+ L+  ++    + +   Y++
Sbjct: 394 IGDAKKIFDEMLRVGPTPDICLHSTLLFGYFKYGLVEEAMLLFSKLERNREDTNISFYTV 453

Query: 541 VMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAG 600
           V+  L     + EA A+F ++     +PD   Y +++  + + G   +       M   G
Sbjct: 454 VINGLCKNDRVREAHAIFEKLPSIGLIPDVRTYNVMITGFCREGLFDEVKGILRKMEDNG 513

Query: 601 LRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDM 659
              N  T N ++  F R  ++S+    ++ M   G      T  +L++   E  S  DM
Sbjct: 514 CPANNITYNVIMQGFFRSNKISEIVSFMKEMAGRGFSFDATTTGVLINVLKENPSIVDM 572



 Score = 99.4 bits (246), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 57/234 (24%), Positives = 118/234 (50%), Gaps = 1/234 (0%)

Query: 347 FNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYG 406
           FN LR + G K +  +Y+ ++    + +      +L  ++ + G +P+ VTY+ ++H   
Sbjct: 331 FNVLRDK-GIKPNIFSYSILINGYCKKKNLAKAMQLFGEISQKGLKPDTVTYSTILHGLI 389

Query: 407 RANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTF 466
               + +A  +F +M  VG  PD   + TL+  + K G ++ AM ++ K++      +  
Sbjct: 390 EVGRIGDAKKIFDEMLRVGPTPDICLHSTLLFGYFKYGLVEEAMLLFSKLERNREDTNIS 449

Query: 467 TYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDM 526
            Y+V+IN L K   ++ AH +F ++ + G IP++ TYN+MI    +   +     + R M
Sbjct: 450 FYTVVINGLCKNDRVREAHAIFEKLPSIGLIPDVRTYNVMITGFCREGLFDEVKGILRKM 509

Query: 527 QNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLW 580
           ++ G   + +TY+++M+       + E  +   EM  + +  D    G+L+++ 
Sbjct: 510 EDNGCPANNITYNVIMQGFFRSNKISEIVSFMKEMAGRGFSFDATTTGVLINVL 563



 Score = 96.7 bits (239), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 65/267 (24%), Positives = 127/267 (47%), Gaps = 1/267 (0%)

Query: 382 LLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHA 441
           L  +MVR    P+V+ +++L  +     + +  + +F++M+++G          + + + 
Sbjct: 49  LFHRMVRMKPLPSVIDFSKLFKTMINMKHYSAVVSLFREMRILGIPISDSILNIVTNSYC 108

Query: 442 KAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQG-CIPNL 500
               +D A  +       G+  +  T++ ++  L     +  A  LF ++V +  C PN 
Sbjct: 109 LRHRIDCAFSVLPIYLKTGIPFNVVTFNTLLGGLFAENKVTDAVVLFKKLVREKICEPNE 168

Query: 501 VTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAE 560
           V Y  ++   +K  + +  L L R M+    +PD  TYSIV++ L     LD A  +  E
Sbjct: 169 VMYGTVMNGLSKRGHTEKTLSLLRIMEQGNTKPDVRTYSIVIDALCKDINLDAAINLLNE 228

Query: 561 MRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQ 620
           M++KN  P+   Y  L+D   K G   K       M+   + PNV T + L+    + G+
Sbjct: 229 MKQKNIPPNIFTYNSLIDGLCKLGQWEKVKTLLSEMVNLNINPNVHTFSILIDGLCKEGK 288

Query: 621 LSDAYHLLQGMLNLGLKPSLQTYTLLL 647
           + DA  +++ M+  G++P + TY+ ++
Sbjct: 289 VEDADEVMRHMIEKGVEPDIITYSAIM 315



 Score = 82.8 bits (203), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 54/246 (21%), Positives = 109/246 (44%), Gaps = 2/246 (0%)

Query: 411 LNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSV 470
           L++A+ +F +M  +   P  + +  L             + ++++M+  G+       ++
Sbjct: 43  LDDAVSLFHRMVRMKPLPSVIDFSKLFKTMINMKHYSAVVSLFREMRILGIPISDSILNI 102

Query: 471 IINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAG 530
           + N       +  A  +    +  G   N+VT+N ++           A+ L++ +    
Sbjct: 103 VTNSYCLRHRIDCAFSVLPIYLKTGIPFNVVTFNTLLGGLFAENKVTDAVVLFKKLVREK 162

Query: 531 F-EPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKA 589
             EP++V Y  VM  L   G+ ++  ++   M + N  PD   Y +++D   K  N+  A
Sbjct: 163 ICEPNEVMYGTVMNGLSKRGHTEKTLSLLRIMEQGNTKPDVRTYSIVIDALCKDINLDAA 222

Query: 590 WEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS- 648
                 M Q  + PN+ T NSL+    ++GQ      LL  M+NL + P++ T+++L+  
Sbjct: 223 INLLNEMKQKNIPPNIFTYNSLIDGLCKLGQWEKVKTLLSEMVNLNINPNVHTFSILIDG 282

Query: 649 CCTEAR 654
            C E +
Sbjct: 283 LCKEGK 288



 Score = 50.8 bits (120), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 70/316 (22%), Positives = 120/316 (37%), Gaps = 46/316 (14%)

Query: 437 IDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGC 496
           I+   +   LD A+ ++ +M      P    +S +   +    H  A   LF EM   G 
Sbjct: 34  INFDKEVSCLDDAVSLFHRMVRMKPLPSVIDFSKLFKTMINMKHYSAVVSLFREMRILGI 93

Query: 497 -----IPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYL 551
                I N+VT +    L+ +     S L +Y      G   + VT++ ++  L     +
Sbjct: 94  PISDSILNIVTNSY--CLRHRIDCAFSVLPIY---LKTGIPFNVVTFNTLLGGLFAENKV 148

Query: 552 DEAEAVFAEM-RRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNS 610
            +A  +F ++ R K   P+E +YG +++   K G+  K       M Q   +P+V T + 
Sbjct: 149 TDAVVLFKKLVREKICEPNEVMYGTVMNGLSKRGHTEKTLSLLRIMEQGNTKPDVRTYSI 208

Query: 611 LLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGFCHELMAVSG 670
           ++ A  +   L  A +LL  M    + P++ TY  L+            G C        
Sbjct: 209 VIDALCKDINLDAAINLLNEMKQKNIPPNIFTYNSLID-----------GLCKL------ 251

Query: 671 HPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRESKRGLVDAVVDFLHKSGLKEEAG 730
                           GQ   + V + L  M + +          ++D L K G  E+A 
Sbjct: 252 ----------------GQ--WEKVKTLLSEMVNLNINPNVHTFSILIDGLCKEGKVEDAD 293

Query: 731 SVWEVAAQKNVYPDAV 746
            V     +K V PD +
Sbjct: 294 EVMRHMIEKGVEPDII 309


>gi|242062936|ref|XP_002452757.1| hypothetical protein SORBIDRAFT_04g031880 [Sorghum bicolor]
 gi|241932588|gb|EES05733.1| hypothetical protein SORBIDRAFT_04g031880 [Sorghum bicolor]
          Length = 502

 Score =  147 bits (372), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 91/309 (29%), Positives = 156/309 (50%), Gaps = 12/309 (3%)

Query: 339 DHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTY 398
           DH  A+ FF  L R  G   D   + +++  L ++R  G    L+  + R    P+ VTY
Sbjct: 157 DH--AVRFFLSLHRSHGVAQDLPLFNSLLDALVKSRHAGKAASLVRALERR-FPPDAVTY 213

Query: 399 NRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQA 458
           N L   + R    + ALD+ +QM   G  P + TY  ++    ++G L  A D + +M+ 
Sbjct: 214 NTLADGWCRVKDTSRALDILRQMVESGIAPTKTTYNIILKGFFRSGQLQHAWDFFLQMKK 273

Query: 459 AG-----LSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKA 513
            G       PD  +Y+ +++ LG AG L  A ++F EM  +GC P++ TYN +I +  K 
Sbjct: 274 RGSNDENCKPDVVSYTTVLHGLGVAGQLDKARKVFDEMSREGCTPSIATYNALIQVTCKK 333

Query: 514 RNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVY 573
            N + A+ ++ DM   G+ P+ VTY++++  L H G +D A  +  +M+R+   P+   Y
Sbjct: 334 GNVEDAVAVFDDMIRKGYIPNVVTYTVLIRGLCHAGKIDRAMKLLDKMKREGCEPNVQTY 393

Query: 574 GLLVDLWGKAGNVRKAWEWYEAMLQA-GLRPNVPTCNSLLSAFL---RVGQLSDAYHLLQ 629
            +L+    + G++ KA   +E M +     PN  T N ++SA     R   ++ A  ++ 
Sbjct: 394 NVLIGYLFEEGDIEKALHLFETMSKGEECLPNQDTYNIIISAMFVRKRAEDMAVAARMVV 453

Query: 630 GMLNLGLKP 638
            M++ G  P
Sbjct: 454 EMVDRGYLP 462



 Score =  100 bits (249), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 92/339 (27%), Positives = 145/339 (42%), Gaps = 22/339 (6%)

Query: 330 ANQVLKQLQDHTV-ALGFFNWLRRQAGFKHDEHTYTTMVGI-----LGRARQFGAINKLL 383
           AN V+K L  H   AL FF+ L R      D    T  + +     L   RQ    + +L
Sbjct: 70  ANAVIKLLWHHAPRALLFFHALLRLPERSRDLSPCTVDLALDLAARLRHPRQL--TSSIL 127

Query: 384 DQMVRDGC--QPNV--VTYNRLIHSYGRANYLNEALDVFKQMQVV-GCEPDRVTYCTLID 438
               R G    P    + + R   S+ R ++   A+  F  +    G   D   + +L+D
Sbjct: 128 ALFPRHGLAFTPRTFPIMFERFAVSHRRPDH---AVRFFLSLHRSHGVAQDLPLFNSLLD 184

Query: 439 IHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIP 498
              K+     A  + + ++     PD  TY+ + +   +      A  +  +MV  G  P
Sbjct: 185 ALVKSRHAGKAASLVRALERR-FPPDAVTYNTLADGWCRVKDTSRALDILRQMVESGIAP 243

Query: 499 NLVTYNIMIALQAKARNYQSALKLYRDMQNAG-----FEPDKVTYSIVMEVLGHCGYLDE 553
              TYNI++    ++   Q A   +  M+  G      +PD V+Y+ V+  LG  G LD+
Sbjct: 244 TKTTYNIILKGFFRSGQLQHAWDFFLQMKKRGSNDENCKPDVVSYTTVLHGLGVAGQLDK 303

Query: 554 AEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLS 613
           A  VF EM R+   P    Y  L+ +  K GNV  A   ++ M++ G  PNV T   L+ 
Sbjct: 304 ARKVFDEMSREGCTPSIATYNALIQVTCKKGNVEDAVAVFDDMIRKGYIPNVVTYTVLIR 363

Query: 614 AFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTE 652
                G++  A  LL  M   G +P++QTY +L+    E
Sbjct: 364 GLCHAGKIDRAMKLLDKMKREGCEPNVQTYNVLIGYLFE 402


>gi|221554580|gb|ACM24117.1| PPR protein [Raphanus sativus]
          Length = 688

 Score =  147 bits (372), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 95/307 (30%), Positives = 155/307 (50%), Gaps = 15/307 (4%)

Query: 338 QDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVT 397
           QD   A     +L    G   D  T+TT++     A++     +LL +M R G   N VT
Sbjct: 373 QDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVT 432

Query: 398 YNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQ 457
           YN LIH +     LN ALD+ +QM   G  PD VT  TL+D     G L  A++M+K MQ
Sbjct: 433 YNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQ 492

Query: 458 AA-----------GLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIM 506
            +           G+ PD  TY+++I  L   G    A +L+ EM ++G +P+ +TY+ M
Sbjct: 493 KSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSM 552

Query: 507 IALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHC--GYLDEAEAVFAEMRRK 564
           I    K      A +++  M +  F P+ VT++ ++   G+C  G +D+   +F EM R+
Sbjct: 553 IDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLIN--GYCKAGRVDDGLELFCEMGRR 610

Query: 565 NWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDA 624
             V D  +Y  L+  + K GN+  A + ++ M+ +G+ P+  T  ++L+ F    +L  A
Sbjct: 611 GIVADAIIYITLIYGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGFWSKEELERA 670

Query: 625 YHLLQGM 631
             +L+ +
Sbjct: 671 VAMLEDL 677



 Score =  138 bits (348), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 94/306 (30%), Positives = 151/306 (49%), Gaps = 2/306 (0%)

Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLI 402
           AL FF+ +  +   + +  T+TT++  L R  +      LLD+M+ DG QP  +TY  ++
Sbjct: 168 ALDFFHQMF-ETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIV 226

Query: 403 HSYGRANYLNEALDVFKQMQVVG-CEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGL 461
               +      AL++ ++M+ V    P+ V Y  +ID   K G    A +++ +MQ  G+
Sbjct: 227 DGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGI 286

Query: 462 SPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALK 521
            PD FTY+ +I     +G    A QL  EM+ +   P++VTYN +I    K   +  A +
Sbjct: 287 FPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAAE 346

Query: 522 LYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWG 581
           LY +M   G  P+ +TY+ +++       LD AE +F  M  K   PD   +  L+D + 
Sbjct: 347 LYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYC 406

Query: 582 KAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQ 641
            A  +    E    M + GL  N  T N+L+  F  VG L+ A  L Q M++ G+ P + 
Sbjct: 407 GAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIV 466

Query: 642 TYTLLL 647
           T   LL
Sbjct: 467 TCNTLL 472



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 93/294 (31%), Positives = 141/294 (47%), Gaps = 13/294 (4%)

Query: 376 FGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCT 435
           FG I KL       G  P+VVT+  L+H     + ++EALD F QM    C P+ VT+ T
Sbjct: 137 FGKITKL-------GLHPDVVTFTTLLHGLCVEDRVSEALDFFHQMFETTCRPNVVTFTT 189

Query: 436 LIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQG 495
           L++   + G +  A+ +  +M   GL P   TY  I++ + K G   +A  L  +M    
Sbjct: 190 LMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVS 249

Query: 496 -CIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHC--GYLD 552
             IPN+V Y+ +I    K   +  A  L+ +MQ  G  PD  TY+ +  ++G C  G   
Sbjct: 250 HIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSM--IVGFCSSGRWS 307

Query: 553 EAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLL 612
           +AE +  EM  +   PD   Y  L++ + K G   +A E Y+ ML  G+ PN  T NS++
Sbjct: 308 DAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMI 367

Query: 613 SAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS-CCTEARSPYDMGFCHEL 665
             F +  +L  A  +   M   G  P + T+T L+   C   R    M   HE+
Sbjct: 368 DGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEM 421



 Score =  135 bits (340), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 89/309 (28%), Positives = 154/309 (49%), Gaps = 16/309 (5%)

Query: 353 QAGFKHDEHTYTTMV-GILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           + G +  + TY T+V G+  +     A+N L          PNVV Y+ +I S  +    
Sbjct: 212 EDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRH 271

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
           ++A ++F +MQ  G  PD  TY ++I     +G    A  + ++M    +SPD  TY+ +
Sbjct: 272 SDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNAL 331

Query: 472 INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF 531
           IN   K G    A +L+ EM+ +G IPN +TYN MI    K     +A  ++  M   G 
Sbjct: 332 INAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGC 391

Query: 532 EPDKVTYSIVMEVLGHCG--YLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKA 589
            PD  T++ +++  G+CG   +D+   +  EM R+  V +   Y  L+  +   G++  A
Sbjct: 392 SPDVFTFTTLID--GYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAA 449

Query: 590 WEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGM----LNL-------GLKP 638
            +  + M+ +G+ P++ TCN+LL      G+L DA  + + M    ++L       G++P
Sbjct: 450 LDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEP 509

Query: 639 SLQTYTLLL 647
            + TY +L+
Sbjct: 510 DVLTYNILI 518



 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 111/434 (25%), Positives = 189/434 (43%), Gaps = 61/434 (14%)

Query: 340 HTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYN 399
           H+ A   F  ++ +  F  D  TY +M+     + ++    +LL +M+     P+VVTYN
Sbjct: 271 HSDAQNLFTEMQEKGIFP-DLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYN 329

Query: 400 RLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAA 459
            LI+++ +     EA +++ +M   G  P+ +TY ++ID   K   LD A DM+  M   
Sbjct: 330 ALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATK 389

Query: 460 GLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSA 519
           G SPD FT++ +I+    A  +    +L  EM  +G + N VTYN +I       +  +A
Sbjct: 390 GCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAA 449

Query: 520 LKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRK----------NWV-P 568
           L L + M ++G  PD VT + +++ L   G L +A  +F  M++           N V P
Sbjct: 450 LDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEP 509

Query: 569 DEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLL 628
           D   Y +L+      G   +A E YE M   G+ P+  T +S++    +  +L +A  + 
Sbjct: 510 DVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMF 569

Query: 629 QGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGFCHELMAVSGHPAHMFLLSMPSPGPDGQ 688
             M +    P++ T+  L++           G+C                          
Sbjct: 570 VSMGSKSFSPNVVTFNTLIN-----------GYCK-----------------------AG 595

Query: 689 NVRDHVGSFLEMMHSEDRESKRGLV-DAVVDF-----LHKSGLKEEAGSVWEVAAQKNVY 742
            V D +  F EM        +RG+V DA++         K G    A  +++      VY
Sbjct: 596 RVDDGLELFCEM-------GRRGIVADAIIYITLIYGFRKVGNINGALDIFQEMISSGVY 648

Query: 743 PDAVKEKGM--SYW 754
           PD +  + M   +W
Sbjct: 649 PDTITIRNMLTGFW 662



 Score =  125 bits (313), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 101/394 (25%), Positives = 183/394 (46%), Gaps = 19/394 (4%)

Query: 363 YTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQ 422
           +  ++G++ R  +   +  L  +M R   + ++ ++N LI  +   + L  AL  F ++ 
Sbjct: 82  FCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFNILIKCFCSCSKLPFALSTFGKIT 141

Query: 423 VVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQ 482
            +G  PD VT+ TL+        +  A+D + +M      P+  T++ ++N L + G + 
Sbjct: 142 KLGLHPDVVTFTTLLHGLCVEDRVSEALDFFHQMFETTCRPNVVTFTTLMNGLCREGRIV 201

Query: 483 AAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAG-FEPDKVTYSIV 541
            A  L   M+  G  P  +TY  ++    K  +  SAL L R M+      P+ V YS +
Sbjct: 202 EAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAI 261

Query: 542 MEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGL 601
           ++ L   G   +A+ +F EM+ K   PD   Y  ++  +  +G    A +  + ML+  +
Sbjct: 262 IDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKI 321

Query: 602 RPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTY-TLLLSCCTEAR--SPYD 658
            P+V T N+L++AF++ G+  +A  L   ML  G+ P+  TY +++   C + R  +  D
Sbjct: 322 SPDVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAED 381

Query: 659 MGFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRESKRGLVDAVVD 718
           M +   LMA  G    +F  +    G  G      +   +E++H   R   RGLV   V 
Sbjct: 382 MFY---LMATKGCSPDVFTFTTLIDGYCGAK---RIDDGMELLHEMPR---RGLVANTVT 432

Query: 719 F---LHKSGLKEEAGSVWEVAAQ---KNVYPDAV 746
           +   +H   L  +  +  +++ Q     V PD V
Sbjct: 433 YNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIV 466



 Score = 94.4 bits (233), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 77/343 (22%), Positives = 144/343 (41%), Gaps = 15/343 (4%)

Query: 411 LNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSV 470
           L +A+D+F  M      P  V +C L+ +  +    D+ + +Y+KM+   +  D +++++
Sbjct: 60  LEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFNI 119

Query: 471 IINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAG 530
           +I C      L  A   F ++   G  P++VT+  ++           AL  +  M    
Sbjct: 120 LIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALDFFHQMFETT 179

Query: 531 FEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAW 590
             P+ VT++ +M  L   G + EA A+   M      P +  YG +VD   K G+   A 
Sbjct: 180 CRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSAL 239

Query: 591 EWYEAMLQAG-LRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTY-TLLLS 648
                M +   + PNV   ++++ +  + G+ SDA +L   M   G+ P L TY ++++ 
Sbjct: 240 NLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVG 299

Query: 649 CCTEARSPYDMGFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRES 708
            C+  R         E++     P  +   ++        N     G F E     D   
Sbjct: 300 FCSSGRWSDAEQLLQEMLERKISPDVVTYNALI-------NAFVKEGKFFEAAELYDEML 352

Query: 709 KRGLV------DAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDA 745
            RG++      ++++D   K    + A  ++ + A K   PD 
Sbjct: 353 PRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDV 395



 Score = 78.2 bits (191), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 46/173 (26%), Positives = 85/173 (49%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           G + D  TY  ++  L    +F    +L ++M   G  P+ +TY+ +I    + + L+EA
Sbjct: 506 GVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEA 565

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
             +F  M      P+ VT+ TLI+ + KAG +D  ++++ +M   G+  D   Y  +I  
Sbjct: 566 TQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVADAIIYITLIYG 625

Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQ 527
             K G++  A  +F EM++ G  P+ +T   M+         + A+ +  D+Q
Sbjct: 626 FRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGFWSKEELERAVAMLEDLQ 678


>gi|11079489|gb|AAG29201.1|AC078898_11 hypothetical protein [Arabidopsis thaliana]
          Length = 481

 Score =  147 bits (372), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 96/377 (25%), Positives = 181/377 (48%), Gaps = 5/377 (1%)

Query: 280 IPAGLAPFSRHFASTGNVVESVSRILRQWKWGPLAEEALGNTNYSMDAYQANQVLKQLQD 339
           + A L   S       +V +++S++L       L + AL  +   +       VL + ++
Sbjct: 18  LSARLYSSSEQVRDVADVAKNISKVLMSSPQLVL-DSALDQSGLRVSQEVVEDVLNRFRN 76

Query: 340 H-TVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTY 398
              +   FF W  +Q  ++H    Y  M+    + RQ+  +  L++ M R     NV T+
Sbjct: 77  AGLLTYRFFQWSEKQRHYEHSVRAYHMMIESTAKIRQYKLMWDLINAM-RKKKMLNVETF 135

Query: 399 NRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQA 458
             ++  Y RA  ++EA+  F  M+     P+ V +  L+    K+  +  A ++++ M+ 
Sbjct: 136 CIVMRKYARAQKVDEAIYAFNVMEKYDLPPNLVAFNGLLSALCKSKNVRKAQEVFENMRD 195

Query: 459 AGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQS 518
              +PD+ TYS+++   GK  +L  A ++F EM++ GC P++VTY+IM+ +  KA     
Sbjct: 196 R-FTPDSKTYSILLEGWGKEPNLPKAREVFREMIDAGCHPDIVTYSIMVDILCKAGRVDE 254

Query: 519 ALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVD 578
           AL + R M  +  +P    YS+++   G    L+EA   F EM R     D  V+  L+ 
Sbjct: 255 ALGIVRSMDPSICKPTTFIYSVLVHTYGTENRLEEAVDTFLEMERSGMKADVAVFNSLIG 314

Query: 579 LWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKP 638
            + KA  ++  +   + M   G+ PN  +CN +L   +  G+  +A+ + + M+ +  +P
Sbjct: 315 AFCKANRMKNVYRVLKEMKSKGVTPNSKSCNIILRHLIERGEKDEAFDVFRKMIKV-CEP 373

Query: 639 SLQTYTLLLSCCTEARS 655
              TYT+++    E + 
Sbjct: 374 DADTYTMVIKMFCEKKE 390



 Score =  129 bits (323), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 81/306 (26%), Positives = 154/306 (50%), Gaps = 2/306 (0%)

Query: 363 YTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQ 422
           +  ++  L +++      ++ + M RD   P+  TY+ L+  +G+   L +A +VF++M 
Sbjct: 170 FNGLLSALCKSKNVRKAQEVFENM-RDRFTPDSKTYSILLEGWGKEPNLPKAREVFREMI 228

Query: 423 VVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQ 482
             GC PD VTY  ++DI  KAG +D A+ + + M  +   P TF YSV+++  G    L+
Sbjct: 229 DAGCHPDIVTYSIMVDILCKAGRVDEALGIVRSMDPSICKPTTFIYSVLVHTYGTENRLE 288

Query: 483 AAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVM 542
            A   F EM   G   ++  +N +I    KA   ++  ++ ++M++ G  P+  + +I++
Sbjct: 289 EAVDTFLEMERSGMKADVAVFNSLIGAFCKANRMKNVYRVLKEMKSKGVTPNSKSCNIIL 348

Query: 543 EVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLR 602
             L   G  DEA  VF +M  K   PD   Y +++ ++ +   +  A + ++ M + G+ 
Sbjct: 349 RHLIERGEKDEAFDVFRKM-IKVCEPDADTYTMVIKMFCEKKEMETADKVWKYMRKKGVF 407

Query: 603 PNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGFC 662
           P++ T + L++          A  LL+ M+ +G++PS  T+  L     +      + F 
Sbjct: 408 PSMHTFSVLINGLCEERTTQKACVLLEEMIEMGIRPSGVTFGRLRQLLIKEEREDVLKFL 467

Query: 663 HELMAV 668
           +E M V
Sbjct: 468 NEKMNV 473



 Score =  111 bits (278), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 65/279 (23%), Positives = 134/279 (48%), Gaps = 2/279 (0%)

Query: 356 FKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEAL 415
           F  D  TY+ ++   G+        ++  +M+  GC P++VTY+ ++    +A  ++EAL
Sbjct: 197 FTPDSKTYSILLEGWGKEPNLPKAREVFREMIDAGCHPDIVTYSIMVDILCKAGRVDEAL 256

Query: 416 DVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCL 475
            + + M    C+P    Y  L+  +     L+ A+D + +M+ +G+  D   ++ +I   
Sbjct: 257 GIVRSMDPSICKPTTFIYSVLVHTYGTENRLEEAVDTFLEMERSGMKADVAVFNSLIGAF 316

Query: 476 GKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDK 535
            KA  ++  +++  EM ++G  PN  + NI++    +      A  ++R M     EPD 
Sbjct: 317 CKANRMKNVYRVLKEMKSKGVTPNSKSCNIILRHLIERGEKDEAFDVFRKMIKVC-EPDA 375

Query: 536 VTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEA 595
            TY++V+++      ++ A+ V+  MR+K   P    + +L++   +    +KA    E 
Sbjct: 376 DTYTMVIKMFCEKKEMETADKVWKYMRKKGVFPSMHTFSVLINGLCEERTTQKACVLLEE 435

Query: 596 MLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNL 634
           M++ G+RP+  T   L    ++  +  D    L   +N+
Sbjct: 436 MIEMGIRPSGVTFGRLRQLLIK-EEREDVLKFLNEKMNV 473



 Score = 94.0 bits (232), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 62/229 (27%), Positives = 114/229 (49%), Gaps = 1/229 (0%)

Query: 354 AGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNE 413
           AG   D  TY+ MV IL +A +      ++  M    C+P    Y+ L+H+YG  N L E
Sbjct: 230 AGCHPDIVTYSIMVDILCKAGRVDEALGIVRSMDPSICKPTTFIYSVLVHTYGTENRLEE 289

Query: 414 ALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIIN 473
           A+D F +M+  G + D   + +LI    KA  +     + K+M++ G++P++ + ++I+ 
Sbjct: 290 AVDTFLEMERSGMKADVAVFNSLIGAFCKANRMKNVYRVLKEMKSKGVTPNSKSCNIILR 349

Query: 474 CLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEP 533
            L + G    A  +F +M+ + C P+  TY ++I +  + +  ++A K+++ M+  G  P
Sbjct: 350 HLIERGEKDEAFDVFRKMI-KVCEPDADTYTMVIKMFCEKKEMETADKVWKYMRKKGVFP 408

Query: 534 DKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGK 582
              T+S+++  L       +A  +  EM      P    +G L  L  K
Sbjct: 409 SMHTFSVLINGLCEERTTQKACVLLEEMIEMGIRPSGVTFGRLRQLLIK 457



 Score = 78.2 bits (191), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 50/177 (28%), Positives = 86/177 (48%), Gaps = 2/177 (1%)

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
           ++G K D   + +++G   +A +   + ++L +M   G  PN  + N ++         +
Sbjct: 299 RSGMKADVAVFNSLIGAFCKANRMKNVYRVLKEMKSKGVTPNSKSCNIILRHLIERGEKD 358

Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
           EA DVF++M  V CEPD  TY  +I +  +   ++ A  ++K M+  G+ P   T+SV+I
Sbjct: 359 EAFDVFRKMIKV-CEPDADTYTMVIKMFCEKKEMETADKVWKYMRKKGVFPSMHTFSVLI 417

Query: 473 NCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNA 529
           N L +    Q A  L  EM+  G  P+ VT+  +  L  K    +  LK   +  N 
Sbjct: 418 NGLCEERTTQKACVLLEEMIEMGIRPSGVTFGRLRQLLIKEER-EDVLKFLNEKMNV 473


>gi|334183972|ref|NP_177860.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|193806398|sp|Q9FVX2.2|PP129_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g77360, mitochondrial; Flags: Precursor
 gi|332197848|gb|AEE35969.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 517

 Score =  147 bits (372), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 96/379 (25%), Positives = 182/379 (48%), Gaps = 9/379 (2%)

Query: 280 IPAGLAPFSRHFASTGNVVESVSRILRQWKWGP--LAEEALGNTNYSMDAYQANQVLKQL 337
           + A L   S       +V +++S++L      P  + + AL  +   +       VL + 
Sbjct: 54  LSARLYSSSEQVRDVADVAKNISKVLMS---SPQLVLDSALDQSGLRVSQEVVEDVLNRF 110

Query: 338 QDH-TVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVV 396
           ++   +   FF W  +Q  ++H    Y  M+    + RQ+  +  L++ M R     NV 
Sbjct: 111 RNAGLLTYRFFQWSEKQRHYEHSVRAYHMMIESTAKIRQYKLMWDLINAM-RKKKMLNVE 169

Query: 397 TYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKM 456
           T+  ++  Y RA  ++EA+  F  M+     P+ V +  L+    K+  +  A ++++ M
Sbjct: 170 TFCIVMRKYARAQKVDEAIYAFNVMEKYDLPPNLVAFNGLLSALCKSKNVRKAQEVFENM 229

Query: 457 QAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNY 516
           +    +PD+ TYS+++   GK  +L  A ++F EM++ GC P++VTY+IM+ +  KA   
Sbjct: 230 RDR-FTPDSKTYSILLEGWGKEPNLPKAREVFREMIDAGCHPDIVTYSIMVDILCKAGRV 288

Query: 517 QSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLL 576
             AL + R M  +  +P    YS+++   G    L+EA   F EM R     D  V+  L
Sbjct: 289 DEALGIVRSMDPSICKPTTFIYSVLVHTYGTENRLEEAVDTFLEMERSGMKADVAVFNSL 348

Query: 577 VDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGL 636
           +  + KA  ++  +   + M   G+ PN  +CN +L   +  G+  +A+ + + M+ +  
Sbjct: 349 IGAFCKANRMKNVYRVLKEMKSKGVTPNSKSCNIILRHLIERGEKDEAFDVFRKMIKV-C 407

Query: 637 KPSLQTYTLLLSCCTEARS 655
           +P   TYT+++    E + 
Sbjct: 408 EPDADTYTMVIKMFCEKKE 426



 Score =  129 bits (324), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 81/306 (26%), Positives = 154/306 (50%), Gaps = 2/306 (0%)

Query: 363 YTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQ 422
           +  ++  L +++      ++ + M RD   P+  TY+ L+  +G+   L +A +VF++M 
Sbjct: 206 FNGLLSALCKSKNVRKAQEVFENM-RDRFTPDSKTYSILLEGWGKEPNLPKAREVFREMI 264

Query: 423 VVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQ 482
             GC PD VTY  ++DI  KAG +D A+ + + M  +   P TF YSV+++  G    L+
Sbjct: 265 DAGCHPDIVTYSIMVDILCKAGRVDEALGIVRSMDPSICKPTTFIYSVLVHTYGTENRLE 324

Query: 483 AAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVM 542
            A   F EM   G   ++  +N +I    KA   ++  ++ ++M++ G  P+  + +I++
Sbjct: 325 EAVDTFLEMERSGMKADVAVFNSLIGAFCKANRMKNVYRVLKEMKSKGVTPNSKSCNIIL 384

Query: 543 EVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLR 602
             L   G  DEA  VF +M  K   PD   Y +++ ++ +   +  A + ++ M + G+ 
Sbjct: 385 RHLIERGEKDEAFDVFRKM-IKVCEPDADTYTMVIKMFCEKKEMETADKVWKYMRKKGVF 443

Query: 603 PNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGFC 662
           P++ T + L++          A  LL+ M+ +G++PS  T+  L     +      + F 
Sbjct: 444 PSMHTFSVLINGLCEERTTQKACVLLEEMIEMGIRPSGVTFGRLRQLLIKEEREDVLKFL 503

Query: 663 HELMAV 668
           +E M V
Sbjct: 504 NEKMNV 509



 Score =  111 bits (278), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 65/279 (23%), Positives = 134/279 (48%), Gaps = 2/279 (0%)

Query: 356 FKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEAL 415
           F  D  TY+ ++   G+        ++  +M+  GC P++VTY+ ++    +A  ++EAL
Sbjct: 233 FTPDSKTYSILLEGWGKEPNLPKAREVFREMIDAGCHPDIVTYSIMVDILCKAGRVDEAL 292

Query: 416 DVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCL 475
            + + M    C+P    Y  L+  +     L+ A+D + +M+ +G+  D   ++ +I   
Sbjct: 293 GIVRSMDPSICKPTTFIYSVLVHTYGTENRLEEAVDTFLEMERSGMKADVAVFNSLIGAF 352

Query: 476 GKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDK 535
            KA  ++  +++  EM ++G  PN  + NI++    +      A  ++R M     EPD 
Sbjct: 353 CKANRMKNVYRVLKEMKSKGVTPNSKSCNIILRHLIERGEKDEAFDVFRKMIKVC-EPDA 411

Query: 536 VTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEA 595
            TY++V+++      ++ A+ V+  MR+K   P    + +L++   +    +KA    E 
Sbjct: 412 DTYTMVIKMFCEKKEMETADKVWKYMRKKGVFPSMHTFSVLINGLCEERTTQKACVLLEE 471

Query: 596 MLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNL 634
           M++ G+RP+  T   L    ++  +  D    L   +N+
Sbjct: 472 MIEMGIRPSGVTFGRLRQLLIK-EEREDVLKFLNEKMNV 509



 Score = 94.0 bits (232), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 62/229 (27%), Positives = 114/229 (49%), Gaps = 1/229 (0%)

Query: 354 AGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNE 413
           AG   D  TY+ MV IL +A +      ++  M    C+P    Y+ L+H+YG  N L E
Sbjct: 266 AGCHPDIVTYSIMVDILCKAGRVDEALGIVRSMDPSICKPTTFIYSVLVHTYGTENRLEE 325

Query: 414 ALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIIN 473
           A+D F +M+  G + D   + +LI    KA  +     + K+M++ G++P++ + ++I+ 
Sbjct: 326 AVDTFLEMERSGMKADVAVFNSLIGAFCKANRMKNVYRVLKEMKSKGVTPNSKSCNIILR 385

Query: 474 CLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEP 533
            L + G    A  +F +M+ + C P+  TY ++I +  + +  ++A K+++ M+  G  P
Sbjct: 386 HLIERGEKDEAFDVFRKMI-KVCEPDADTYTMVIKMFCEKKEMETADKVWKYMRKKGVFP 444

Query: 534 DKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGK 582
              T+S+++  L       +A  +  EM      P    +G L  L  K
Sbjct: 445 SMHTFSVLINGLCEERTTQKACVLLEEMIEMGIRPSGVTFGRLRQLLIK 493



 Score = 78.6 bits (192), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 50/177 (28%), Positives = 86/177 (48%), Gaps = 2/177 (1%)

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
           ++G K D   + +++G   +A +   + ++L +M   G  PN  + N ++         +
Sbjct: 335 RSGMKADVAVFNSLIGAFCKANRMKNVYRVLKEMKSKGVTPNSKSCNIILRHLIERGEKD 394

Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
           EA DVF++M  V CEPD  TY  +I +  +   ++ A  ++K M+  G+ P   T+SV+I
Sbjct: 395 EAFDVFRKMIKV-CEPDADTYTMVIKMFCEKKEMETADKVWKYMRKKGVFPSMHTFSVLI 453

Query: 473 NCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNA 529
           N L +    Q A  L  EM+  G  P+ VT+  +  L  K    +  LK   +  N 
Sbjct: 454 NGLCEERTTQKACVLLEEMIEMGIRPSGVTFGRLRQLLIKEER-EDVLKFLNEKMNV 509


>gi|449531171|ref|XP_004172561.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g59900-like [Cucumis sativus]
          Length = 761

 Score =  147 bits (372), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 87/280 (31%), Positives = 145/280 (51%), Gaps = 17/280 (6%)

Query: 391 CQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAM 450
           C+PN ++Y+ +I    +    +EA ++FK+M+ +G  PD ++Y +LI    ++G    A 
Sbjct: 479 CKPNAISYSIIIDGLCKCGREDEARELFKEMKALGVIPDVISYTSLIHGFCRSGKWKDAK 538

Query: 451 DMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQ 510
            ++ +M   G+ PD  T+SV+I+ L K G +  A++L   M+ +GCIPN VTY  ++   
Sbjct: 539 YLFNEMVDIGVQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQRGCIPNTVTYTTLVKGL 598

Query: 511 AKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRR------K 564
                   A +L+  MQ  G  PD VTY  +M+ L   G +  A  +  +M         
Sbjct: 599 CMNDRISEATQLFMKMQKLGCLPDVVTYGTLMKGLCQTGNIKTALELHKKMLSDTGQYGT 658

Query: 565 NWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDA 624
           N+ PD   Y +++D   K G   +A E ++ M   G+ PNV +  SL+  F R G+L DA
Sbjct: 659 NFKPDVISYSIIIDGLCKHGREDEARELFKEMKALGVIPNVISYTSLIHGFCRSGKLEDA 718

Query: 625 YHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGFCHE 664
            HL   M++ G++ +  TY++++            GFC E
Sbjct: 719 KHLFNEMVDQGVQLNAVTYSVMIH-----------GFCKE 747



 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 105/436 (24%), Positives = 194/436 (44%), Gaps = 30/436 (6%)

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
             G + D  T   ++ +  +  +    N+LL+ MV+ GC  ++VTY+ LI      + ++
Sbjct: 3   HVGIQPDVTTSGVLIDMFCKEGKVIEANELLEVMVQRGCILDIVTYSTLIKGLCMKHRIS 62

Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKM------QAAGLSPDTF 466
           EA  +F  M+ +GC PD + Y TL+    + G +++A+ ++++M            P   
Sbjct: 63  EATQLFMSMKKLGCRPDAIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKCKPTLV 122

Query: 467 TYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDM 526
           +YS+II+ L K      A +LF EM  QG +P++++Y  +I    ++  ++ A  L+ +M
Sbjct: 123 SYSIIIDGLCKDRREDEARELFKEMKAQGMMPDVISYTSLIHGFCRSGKWEKAKCLFNEM 182

Query: 527 QNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNV 586
            + G   D  T S+++++L   G + EA  +   M ++  + D   Y  L+        +
Sbjct: 183 LDVGIRSDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMKHRI 242

Query: 587 RKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLN------LGLKPSL 640
            +A   + +M + G RP+     +L+    + G ++ A  L Q MLN      +  KP+L
Sbjct: 243 SEATRLFMSMQKLGCRPDAIAYGTLMKGLCQTGNINTALQLHQEMLNDTGRYGIKCKPTL 302

Query: 641 QTYTLLLS-CCTEARSPYDMGFCHELMAVSGHP--------AHMFLLSMPSPGPDGQNVR 691
            +Y++++   C + R         E+ A    P         H F LS        +  +
Sbjct: 303 ISYSIIIDGLCKDRREDEARELFKEMKAQGIMPDVISYTTLIHGFCLS-----GKWEKAK 357

Query: 692 DHVGSFLEMMHSEDRESKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAVKEKGM 751
                 L++    D  +       ++D L K G   EA  + EV  Q+   PD V    +
Sbjct: 358 CLFNEMLDVGIQPDVTTS----SVLIDMLCKKGKVIEANKLLEVVIQRGCIPDVVTCTTL 413

Query: 752 SYWLINLHVMSDGTAV 767
              L   H +S  T +
Sbjct: 414 VKGLCMKHRISKATQL 429



 Score =  132 bits (333), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 107/426 (25%), Positives = 177/426 (41%), Gaps = 70/426 (16%)

Query: 362 TYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQM 421
           +Y+ ++  L + R+     +L  +M   G  P+V++Y  LIH + R+    +A  +F +M
Sbjct: 123 SYSIIIDGLCKDRREDEARELFKEMKAQGMMPDVISYTSLIHGFCRSGKWEKAKCLFNEM 182

Query: 422 QVVGCEPDRVTYCTLIDIHAKAG-----------------FLDV---------------- 448
             VG   D  T   LIDI  K G                  LD+                
Sbjct: 183 LDVGIRSDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMKHRI 242

Query: 449 --AMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQ------GCIPNL 500
             A  ++  MQ  G  PD   Y  ++  L + G++  A QL  EM+N        C P L
Sbjct: 243 SEATRLFMSMQKLGCRPDAIAYGTLMKGLCQTGNINTALQLHQEMLNDTGRYGIKCKPTL 302

Query: 501 VTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAE 560
           ++Y+I+I    K R    A +L+++M+  G  PD ++Y+ ++      G  ++A+ +F E
Sbjct: 303 ISYSIIIDGLCKDRREDEARELFKEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCLFNE 362

Query: 561 MRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQ 620
           M      PD     +L+D+  K G V +A +  E ++Q G  P+V TC +L+       +
Sbjct: 363 MLDVGIQPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCIPDVVTCTTLVKGLCMKHR 422

Query: 621 LSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGFCHELMAVSGHPAHMFLLSM 680
           +S A  L   M  LG  P++ T   L+            G C           H  +LS 
Sbjct: 423 ISKATQLFLKMQKLGCMPNVVTCATLMK-----------GLCQSGNIKIALELHKNMLSD 471

Query: 681 PSPGPDGQNVRDHVGSFLEMMHSEDRESKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKN 740
            SP   G N + +  S+                  ++D L K G ++EA  +++      
Sbjct: 472 TSPY--GINCKPNAISY----------------SIIIDGLCKCGREDEARELFKEMKALG 513

Query: 741 VYPDAV 746
           V PD +
Sbjct: 514 VIPDVI 519



 Score =  132 bits (331), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 78/276 (28%), Positives = 144/276 (52%), Gaps = 8/276 (2%)

Query: 362 TYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQM 421
           +Y+ ++  L +  +     +L  +M   G  P+V++Y  LIH + R+    +A  +F +M
Sbjct: 485 SYSIIIDGLCKCGREDEARELFKEMKALGVIPDVISYTSLIHGFCRSGKWKDAKYLFNEM 544

Query: 422 QVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHL 481
             +G +PD  T+  LID+  K G +  A ++ + M   G  P+T TY+ ++  L     +
Sbjct: 545 VDIGVQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQRGCIPNTVTYTTLVKGLCMNDRI 604

Query: 482 QAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQN------AGFEPDK 535
             A QLF +M   GC+P++VTY  ++    +  N ++AL+L++ M +        F+PD 
Sbjct: 605 SEATQLFMKMQKLGCLPDVVTYGTLMKGLCQTGNIKTALELHKKMLSDTGQYGTNFKPDV 664

Query: 536 VTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEA 595
           ++YSI+++ L   G  DEA  +F EM+    +P+   Y  L+  + ++G +  A   +  
Sbjct: 665 ISYSIIIDGLCKHGREDEARELFKEMKALGVIPNVISYTSLIHGFCRSGKLEDAKHLFNE 724

Query: 596 MLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGM 631
           M+  G++ N  T + ++  F + GQ+  A  L Q M
Sbjct: 725 MVDQGVQLNAVTYSVMIHGFCKEGQIDKA--LFQKM 758



 Score =  131 bits (329), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 85/316 (26%), Positives = 158/316 (50%), Gaps = 13/316 (4%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRD------GCQPNVVTYNRLIHSY 405
           ++ G + D   Y T++  L +        +L  +M+ D       C+P +++Y+ +I   
Sbjct: 253 QKLGCRPDAIAYGTLMKGLCQTGNINTALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGL 312

Query: 406 GRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDT 465
            +    +EA ++FK+M+  G  PD ++Y TLI     +G  + A  ++ +M   G+ PD 
Sbjct: 313 CKDRREDEARELFKEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCLFNEMLDVGIQPDV 372

Query: 466 FTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRD 525
            T SV+I+ L K G +  A++L   ++ +GCIP++VT   ++           A +L+  
Sbjct: 373 TTSSVLIDMLCKKGKVIEANKLLEVVIQRGCIPDVVTCTTLVKGLCMKHRISKATQLFLK 432

Query: 526 MQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRK------NWVPDEPVYGLLVDL 579
           MQ  G  P+ VT + +M+ L   G +  A  +   M         N  P+   Y +++D 
Sbjct: 433 MQKLGCMPNVVTCATLMKGLCQSGNIKIALELHKNMLSDTSPYGINCKPNAISYSIIIDG 492

Query: 580 WGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPS 639
             K G   +A E ++ M   G+ P+V +  SL+  F R G+  DA +L   M+++G++P 
Sbjct: 493 LCKCGREDEARELFKEMKALGVIPDVISYTSLIHGFCRSGKWKDAKYLFNEMVDIGVQPD 552

Query: 640 LQTYTLLLS-CCTEAR 654
           + T+++L+   C E +
Sbjct: 553 VTTFSVLIDMLCKEGK 568



 Score =  121 bits (304), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 80/308 (25%), Positives = 150/308 (48%), Gaps = 12/308 (3%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRD------GCQPNVVTYNRLIHSY 405
           ++ G + D   Y T++  L +  +      L  +M+ D       C+P +V+Y+ +I   
Sbjct: 72  KKLGCRPDAIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKCKPTLVSYSIIIDGL 131

Query: 406 GRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDT 465
            +    +EA ++FK+M+  G  PD ++Y +LI    ++G  + A  ++ +M   G+  D 
Sbjct: 132 CKDRREDEARELFKEMKAQGMMPDVISYTSLIHGFCRSGKWEKAKCLFNEMLDVGIRSDV 191

Query: 466 FTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRD 525
            T S++I+ L K G +  A++L   M+ +GCI ++VTY+ +I           A +L+  
Sbjct: 192 TTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMKHRISEATRLFMS 251

Query: 526 MQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKN------WVPDEPVYGLLVDL 579
           MQ  G  PD + Y  +M+ L   G ++ A  +  EM            P    Y +++D 
Sbjct: 252 MQKLGCRPDAIAYGTLMKGLCQTGNINTALQLHQEMLNDTGRYGIKCKPTLISYSIIIDG 311

Query: 580 WGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPS 639
             K     +A E ++ M   G+ P+V +  +L+  F   G+   A  L   ML++G++P 
Sbjct: 312 LCKDRREDEARELFKEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCLFNEMLDVGIQPD 371

Query: 640 LQTYTLLL 647
           + T ++L+
Sbjct: 372 VTTSSVLI 379



 Score =  119 bits (297), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 68/214 (31%), Positives = 118/214 (55%), Gaps = 8/214 (3%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           G + D  T++ ++ +L +  +    N+LL+ M++ GC PN VTY  L+      + ++EA
Sbjct: 548 GVQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQRGCIPNTVTYTTLVKGLCMNDRISEA 607

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQA------AGLSPDTFTY 468
             +F +MQ +GC PD VTY TL+    + G +  A++++KKM +          PD  +Y
Sbjct: 608 TQLFMKMQKLGCLPDVVTYGTLMKGLCQTGNIKTALELHKKMLSDTGQYGTNFKPDVISY 667

Query: 469 SVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQN 528
           S+II+ L K G    A +LF EM   G IPN+++Y  +I    ++   + A  L+ +M +
Sbjct: 668 SIIIDGLCKHGREDEARELFKEMKALGVIPNVISYTSLIHGFCRSGKLEDAKHLFNEMVD 727

Query: 529 AGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMR 562
            G + + VTYS+++      G +D  +A+F +M 
Sbjct: 728 QGVQLNAVTYSVMIHGFCKEGQID--KALFQKME 759



 Score =  116 bits (291), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 77/268 (28%), Positives = 126/268 (47%), Gaps = 6/268 (2%)

Query: 386 MVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGF 445
           M+  G QP+V T   LI  + +   + EA ++ + M   GC  D VTY TLI        
Sbjct: 1   MLHVGIQPDVTTSGVLIDMFCKEGKVIEANELLEVMVQRGCILDIVTYSTLIKGLCMKHR 60

Query: 446 LDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQ------GCIPN 499
           +  A  ++  M+  G  PD   Y  ++  L + G +  A  L  EM+N        C P 
Sbjct: 61  ISEATQLFMSMKKLGCRPDAIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKCKPT 120

Query: 500 LVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFA 559
           LV+Y+I+I    K R    A +L+++M+  G  PD ++Y+ ++      G  ++A+ +F 
Sbjct: 121 LVSYSIIIDGLCKDRREDEARELFKEMKAQGMMPDVISYTSLIHGFCRSGKWEKAKCLFN 180

Query: 560 EMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVG 619
           EM       D     +L+D+  K G V +A E  E M+Q G   ++ T ++L+       
Sbjct: 181 EMLDVGIRSDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMKH 240

Query: 620 QLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
           ++S+A  L   M  LG +P    Y  L+
Sbjct: 241 RISEATRLFMSMQKLGCRPDAIAYGTLM 268



 Score = 89.4 bits (220), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 76/338 (22%), Positives = 137/338 (40%), Gaps = 47/338 (13%)

Query: 456 MQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARN 515
           M   G+ PD  T  V+I+   K G +  A++L   MV +GCI ++VTY+ +I        
Sbjct: 1   MLHVGIQPDVTTSGVLIDMFCKEGKVIEANELLEVMVQRGCILDIVTYSTLIKGLCMKHR 60

Query: 516 YQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYL------------------------ 551
              A +L+  M+  G  PD + Y  +M+ L   G +                        
Sbjct: 61  ISEATQLFMSMKKLGCRPDAIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKCKPT 120

Query: 552 -----------------DEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYE 594
                            DEA  +F EM+ +  +PD   Y  L+  + ++G   KA   + 
Sbjct: 121 LVSYSIIIDGLCKDRREDEARELFKEMKAQGMMPDVISYTSLIHGFCRSGKWEKAKCLFN 180

Query: 595 AMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTY-TLLLSCCTEA 653
            ML  G+R +V T + L+    + G++ +A  LL+ M+  G    + TY TL+   C + 
Sbjct: 181 EMLDVGIRSDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMKH 240

Query: 654 RSPYDMGFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDR---ESKR 710
           R          +  +   P  +   ++        N+   +    EM++   R   + K 
Sbjct: 241 RISEATRLFMSMQKLGCRPDAIAYGTLMKGLCQTGNINTALQLHQEMLNDTGRYGIKCKP 300

Query: 711 GLV--DAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAV 746
            L+    ++D L K   ++EA  +++    + + PD +
Sbjct: 301 TLISYSIIIDGLCKDRREDEARELFKEMKAQGIMPDVI 338



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 32/103 (31%), Positives = 55/103 (53%), Gaps = 2/103 (1%)

Query: 356 FKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEAL 415
           FK D  +Y+ ++  L +  +     +L  +M   G  PNV++Y  LIH + R+  L +A 
Sbjct: 660 FKPDVISYSIIIDGLCKHGREDEARELFKEMKALGVIPNVISYTSLIHGFCRSGKLEDAK 719

Query: 416 DVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQA 458
            +F +M   G + + VTY  +I    K G +D A  +++KM+A
Sbjct: 720 HLFNEMVDQGVQLNAVTYSVMIHGFCKEGQIDKA--LFQKMEA 760


>gi|224081220|ref|XP_002306340.1| predicted protein [Populus trichocarpa]
 gi|222855789|gb|EEE93336.1| predicted protein [Populus trichocarpa]
          Length = 416

 Score =  147 bits (372), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 103/403 (25%), Positives = 202/403 (50%), Gaps = 29/403 (7%)

Query: 264 VECVSERFSK---PSREMKIPAGLAP-FSRHFASTGNVVESVSR---ILRQWKWGPLAEE 316
           V CVS R  K   P+ E      L     R F+    +V+++++   ++R      L EE
Sbjct: 3   VSCVSTRPKKRPVPTDEKSEAQELVRVLVRSFSDKQPLVKTLNKYVKVMRTEHCFMLFEE 62

Query: 317 ALGNTNYSMDAYQANQVLKQLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQF 376
            LG T+            K LQ     L  F W+++Q  +  D   Y+ ++ ++G+  Q 
Sbjct: 63  -LGKTD------------KWLQ----CLEVFRWMQKQRWYVADNGCYSKLISVMGKKGQT 105

Query: 377 GAINKLLDQMVRDGCQPNVVTYNRLI----HSYGRANYLNEALDVFKQMQVVG-CEPDRV 431
                L  +M   GC+P+   YN LI    HS  +A  L +AL  F++M+ +  C+P+ V
Sbjct: 106 RMAMWLFSEMRNSGCRPDTSVYNALITAHLHSKDKAKSLTKALAYFEKMKSIERCQPNVV 165

Query: 432 TYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEM 491
           TY  ++   A+A  ++    ++K ++ + +SPD +TY+ +++  GK G ++    +   M
Sbjct: 166 TYNIILRAFAQARNVNQVNALFKDLEESIVSPDIYTYNGVLDAYGKNGMIREMESVLSRM 225

Query: 492 VNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYL 551
               C P+++T+N++I    K ++++   ++++ +  +  +P   T++ ++   G     
Sbjct: 226 KIDQCKPDIITFNLLIDSYGKKQDFEKMEQVFKSLLRSKEKPTLPTFNSMIVNYGKARLK 285

Query: 552 DEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSL 611
           D+AE+VF +M    + P    +  L+ ++G    V KA + ++ M+++G    V T N++
Sbjct: 286 DKAESVFKKMADMRYTPSFITFESLIMMYGICDCVSKARDIFDDMVESGKEVKVSTLNAV 345

Query: 612 LSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEAR 654
           L+ +   G   +A+ LL+   ++G+ P+  TY LL    T+A+
Sbjct: 346 LNVYCMNGLHMEAHILLENARSIGVPPNSSTYKLLYRAYTKAK 388



 Score = 89.7 bits (221), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 62/264 (23%), Positives = 114/264 (43%)

Query: 341 TVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNR 400
           T AL +F  ++     + +  TY  ++    +AR    +N L   +      P++ TYN 
Sbjct: 145 TKALAYFEKMKSIERCQPNVVTYNIILRAFAQARNVNQVNALFKDLEESIVSPDIYTYNG 204

Query: 401 LIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAG 460
           ++ +YG+   + E   V  +M++  C+PD +T+  LID + K    +    ++K +  + 
Sbjct: 205 VLDAYGKNGMIREMESVLSRMKIDQCKPDIITFNLLIDSYGKKQDFEKMEQVFKSLLRSK 264

Query: 461 LSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSAL 520
             P   T++ +I   GKA     A  +F +M +    P+ +T+  +I +         A 
Sbjct: 265 EKPTLPTFNSMIVNYGKARLKDKAESVFKKMADMRYTPSFITFESLIMMYGICDCVSKAR 324

Query: 521 KLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLW 580
            ++ DM  +G E    T + V+ V    G   EA  +    R     P+   Y LL   +
Sbjct: 325 DIFDDMVESGKEVKVSTLNAVLNVYCMNGLHMEAHILLENARSIGVPPNSSTYKLLYRAY 384

Query: 581 GKAGNVRKAWEWYEAMLQAGLRPN 604
            KA       +  + M + G+ PN
Sbjct: 385 TKAKMKELVQKLLKHMDKDGIIPN 408



 Score = 73.9 bits (180), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 53/245 (21%), Positives = 104/245 (42%), Gaps = 14/245 (5%)

Query: 329 QANQVLKQLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVR 388
           Q N + K L++  V+               D +TY  ++   G+      +  +L +M  
Sbjct: 182 QVNALFKDLEESIVS--------------PDIYTYNGVLDAYGKNGMIREMESVLSRMKI 227

Query: 389 DGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDV 448
           D C+P+++T+N LI SYG+     +   VFK +     +P   T+ ++I  + KA   D 
Sbjct: 228 DQCKPDIITFNLLIDSYGKKQDFEKMEQVFKSLLRSKEKPTLPTFNSMIVNYGKARLKDK 287

Query: 449 AMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIA 508
           A  ++KKM     +P   T+  +I   G    +  A  +F +MV  G    + T N ++ 
Sbjct: 288 AESVFKKMADMRYTPSFITFESLIMMYGICDCVSKARDIFDDMVESGKEVKVSTLNAVLN 347

Query: 509 LQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVP 568
           +      +  A  L  + ++ G  P+  TY ++          +  + +   M +   +P
Sbjct: 348 VYCMNGLHMEAHILLENARSIGVPPNSSTYKLLYRAYTKAKMKELVQKLLKHMDKDGIIP 407

Query: 569 DEPVY 573
           ++  +
Sbjct: 408 NKRFF 412



 Score = 71.6 bits (174), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 50/214 (23%), Positives = 97/214 (45%), Gaps = 7/214 (3%)

Query: 322 NYSMDAYQANQVLKQLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINK 381
           N  +DAY  N ++++++     +            K D  T+  ++   G+ + F  + +
Sbjct: 203 NGVLDAYGKNGMIREMESVLSRMKI-------DQCKPDIITFNLLIDSYGKKQDFEKMEQ 255

Query: 382 LLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHA 441
           +   ++R   +P + T+N +I +YG+A   ++A  VFK+M  +   P  +T+ +LI ++ 
Sbjct: 256 VFKSLLRSKEKPTLPTFNSMIVNYGKARLKDKAESVFKKMADMRYTPSFITFESLIMMYG 315

Query: 442 KAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLV 501
               +  A D++  M  +G      T + ++N     G    AH L     + G  PN  
Sbjct: 316 ICDCVSKARDIFDDMVESGKEVKVSTLNAVLNVYCMNGLHMEAHILLENARSIGVPPNSS 375

Query: 502 TYNIMIALQAKARNYQSALKLYRDMQNAGFEPDK 535
           TY ++     KA+  +   KL + M   G  P+K
Sbjct: 376 TYKLLYRAYTKAKMKELVQKLLKHMDKDGIIPNK 409


>gi|22128591|gb|AAM52341.1| fertility restorer-like protein [Petunia x hybrida]
          Length = 592

 Score =  147 bits (372), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 86/311 (27%), Positives = 156/311 (50%), Gaps = 4/311 (1%)

Query: 340 HTVALGF-FNWLRRQAGFKHDEHTYTTMV-GILGRARQFGAINKLLDQMVRDG-CQPNVV 396
           H   LGF    +  + G   ++  + T++ G+    +   A++ L  ++VR+  C+PN V
Sbjct: 121 HRTDLGFSVLAIHFKKGIPFNQVIFNTLLRGLFAENKVKDAVH-LFKKLVRENICEPNEV 179

Query: 397 TYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKM 456
            Y  +++   +  +  +A D+ + M+    +P+   Y  +ID   K G LD A  +  +M
Sbjct: 180 MYGTVMNGLCKKGHTQKAFDLLRLMEQGSTKPNTCIYSIVIDAFCKDGMLDGATSLLNEM 239

Query: 457 QAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNY 516
           +   + PD FTYS +I+ L K    +    LF EM++    PN+ T+N +I    K    
Sbjct: 240 KQKSIPPDIFTYSTLIDALCKLSQWENVRTLFLEMIHLNIYPNVCTFNSVIDGLCKEGKV 299

Query: 517 QSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLL 576
           + A ++ R M   G +PD +TY+++++  G  G +D A  +F  M  K+  P+   Y +L
Sbjct: 300 EDAEEIMRYMIEKGVDPDVITYNMIIDGYGLRGQVDRAREIFDSMINKSIEPNIISYNIL 359

Query: 577 VDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGL 636
           ++ + +   + +A +    + Q GL+P++ TCN LL     +G+   A +    ML+ G 
Sbjct: 360 INGYARQKKIDEAMQVCREISQKGLKPSIVTCNVLLHGLFELGRTKSAQNFFDEMLSAGH 419

Query: 637 KPSLQTYTLLL 647
            P L T+  LL
Sbjct: 420 IPDLYTHCTLL 430



 Score =  123 bits (308), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 74/296 (25%), Positives = 150/296 (50%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           +Q     D  TY+T++  L +  Q+  +  L  +M+     PNV T+N +I    +   +
Sbjct: 240 KQKSIPPDIFTYSTLIDALCKLSQWENVRTLFLEMIHLNIYPNVCTFNSVIDGLCKEGKV 299

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
            +A ++ + M   G +PD +TY  +ID +   G +D A +++  M    + P+  +Y+++
Sbjct: 300 EDAEEIMRYMIEKGVDPDVITYNMIIDGYGLRGQVDRAREIFDSMINKSIEPNIISYNIL 359

Query: 472 INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF 531
           IN   +   +  A Q+  E+  +G  P++VT N+++    +    +SA   + +M +AG 
Sbjct: 360 INGYARQKKIDEAMQVCREISQKGLKPSIVTCNVLLHGLFELGRTKSAQNFFDEMLSAGH 419

Query: 532 EPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWE 591
            PD  T+  ++      G ++EA + F ++ R+    +  +Y  ++D   K G + KA  
Sbjct: 420 IPDLYTHCTLLGGYFKNGLVEEAMSHFHKLERRREDTNIQIYTAVIDGLCKNGKLDKAHA 479

Query: 592 WYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
            +E +   GL P+V T  +++S + + G L +A  +L+ M + G     +TY +++
Sbjct: 480 TFEKLPLIGLHPDVITYTAMISGYCQEGLLDEAKDMLRKMEDNGCLADNRTYNVIV 535



 Score =  122 bits (307), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 77/320 (24%), Positives = 152/320 (47%), Gaps = 13/320 (4%)

Query: 347 FNWLR--RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHS 404
           F+ LR   Q   K +   Y+ ++    +         LL++M +    P++ TY+ LI +
Sbjct: 198 FDLLRLMEQGSTKPNTCIYSIVIDAFCKDGMLDGATSLLNEMKQKSIPPDIFTYSTLIDA 257

Query: 405 YGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPD 464
             + +       +F +M  +   P+  T+ ++ID   K G ++ A ++ + M   G+ PD
Sbjct: 258 LCKLSQWENVRTLFLEMIHLNIYPNVCTFNSVIDGLCKEGKVEDAEEIMRYMIEKGVDPD 317

Query: 465 TFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYR 524
             TY++II+  G  G +  A ++F  M+N+   PN+++YNI+I   A+ +    A+++ R
Sbjct: 318 VITYNMIIDGYGLRGQVDRAREIFDSMINKSIEPNIISYNILINGYARQKKIDEAMQVCR 377

Query: 525 DMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAG 584
           ++   G +P  VT ++++  L   G    A+  F EM     +PD   +  L+  + K G
Sbjct: 378 EISQKGLKPSIVTCNVLLHGLFELGRTKSAQNFFDEMLSAGHIPDLYTHCTLLGGYFKNG 437

Query: 585 NVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYT 644
            V +A   +  + +     N+    +++    + G+L  A+   + +  +GL P + TYT
Sbjct: 438 LVEEAMSHFHKLERRREDTNIQIYTAVIDGLCKNGKLDKAHATFEKLPLIGLHPDVITYT 497

Query: 645 LLLSCCTEARSPYDMGFCHE 664
            ++S           G+C E
Sbjct: 498 AMIS-----------GYCQE 506



 Score =  106 bits (264), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 71/298 (23%), Positives = 142/298 (47%)

Query: 362 TYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQM 421
           T+ +++  L +  +     +++  M+  G  P+V+TYN +I  YG    ++ A ++F  M
Sbjct: 285 TFNSVIDGLCKEGKVEDAEEIMRYMIEKGVDPDVITYNMIIDGYGLRGQVDRAREIFDSM 344

Query: 422 QVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHL 481
                EP+ ++Y  LI+ +A+   +D AM + +++   GL P   T +V+++ L + G  
Sbjct: 345 INKSIEPNIISYNILINGYARQKKIDEAMQVCREISQKGLKPSIVTCNVLLHGLFELGRT 404

Query: 482 QAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIV 541
           ++A   F EM++ G IP+L T+  ++    K    + A+  +  ++    + +   Y+ V
Sbjct: 405 KSAQNFFDEMLSAGHIPDLYTHCTLLGGYFKNGLVEEAMSHFHKLERRREDTNIQIYTAV 464

Query: 542 MEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGL 601
           ++ L   G LD+A A F ++      PD   Y  ++  + + G + +A +    M   G 
Sbjct: 465 IDGLCKNGKLDKAHATFEKLPLIGLHPDVITYTAMISGYCQEGLLDEAKDMLRKMEDNGC 524

Query: 602 RPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDM 659
             +  T N ++  FLR  ++S+    L+ +          T  LL+    E  S  +M
Sbjct: 525 LADNRTYNVIVRGFLRSNKVSEMKAFLEEIAGKSFSFEAATVELLMDIIAEDPSLLNM 582



 Score =  101 bits (252), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 93/442 (21%), Positives = 183/442 (41%), Gaps = 73/442 (16%)

Query: 382 LLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDR------VTYCT 435
           L  QMVR    P+VV++++L+ +     + +  + +F+++  +            V  C 
Sbjct: 59  LFRQMVRTKPLPSVVSFSKLLKALVHMKHYSSVVSLFREIHKLRIPVHEFILSIVVNSCC 118

Query: 436 LID----------IHAKAGF-------------------LDVAMDMYKKMQAAGL-SPDT 465
           L+           IH K G                    +  A+ ++KK+    +  P+ 
Sbjct: 119 LMHRTDLGFSVLAIHFKKGIPFNQVIFNTLLRGLFAENKVKDAVHLFKKLVRENICEPNE 178

Query: 466 FTYSVIINCLGKAGHLQAAHQL----------------------FC-------------E 490
             Y  ++N L K GH Q A  L                      FC             E
Sbjct: 179 VMYGTVMNGLCKKGHTQKAFDLLRLMEQGSTKPNTCIYSIVIDAFCKDGMLDGATSLLNE 238

Query: 491 MVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGY 550
           M  +   P++ TY+ +I    K   +++   L+ +M +    P+  T++ V++ L   G 
Sbjct: 239 MKQKSIPPDIFTYSTLIDALCKLSQWENVRTLFLEMIHLNIYPNVCTFNSVIDGLCKEGK 298

Query: 551 LDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNS 610
           +++AE +   M  K   PD   Y +++D +G  G V +A E +++M+   + PN+ + N 
Sbjct: 299 VEDAEEIMRYMIEKGVDPDVITYNMIIDGYGLRGQVDRAREIFDSMINKSIEPNIISYNI 358

Query: 611 LLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTE-ARSPYDMGFCHELMAVS 669
           L++ + R  ++ +A  + + +   GLKPS+ T  +LL    E  R+     F  E+++ +
Sbjct: 359 LINGYARQKKIDEAMQVCREISQKGLKPSIVTCNVLLHGLFELGRTKSAQNFFDEMLS-A 417

Query: 670 GHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRESKRGLVDAVVDFLHKSGLKEEA 729
           GH   ++       G     + +   S    +     ++   +  AV+D L K+G  ++A
Sbjct: 418 GHIPDLYTHCTLLGGYFKNGLVEEAMSHFHKLERRREDTNIQIYTAVIDGLCKNGKLDKA 477

Query: 730 GSVWEVAAQKNVYPDAVKEKGM 751
            + +E      ++PD +    M
Sbjct: 478 HATFEKLPLIGLHPDVITYTAM 499



 Score = 60.1 bits (144), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 64/303 (21%), Positives = 121/303 (39%), Gaps = 73/303 (24%)

Query: 481 LQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQ------------- 527
           L  A  LF +MV    +P++V+++ ++      ++Y S + L+R++              
Sbjct: 53  LDDAFSLFRQMVRTKPLPSVVSFSKLLKALVHMKHYSSVVSLFREIHKLRIPVHEFILSI 112

Query: 528 ----------------------NAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKN 565
                                   G   ++V ++ ++  L     + +A  +F ++ R+N
Sbjct: 113 VVNSCCLMHRTDLGFSVLAIHFKKGIPFNQVIFNTLLRGLFAENKVKDAVHLFKKLVREN 172

Query: 566 WV-PDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDA 624
              P+E +YG +++   K G+ +KA++    M Q   +PN    + ++ AF + G L  A
Sbjct: 173 ICEPNEVMYGTVMNGLCKKGHTQKAFDLLRLMEQGSTKPNTCIYSIVIDAFCKDGMLDGA 232

Query: 625 YHLLQGMLNLGLKPSLQTY-TLLLSCCTEARSPYDMGFCHELMAVSGHPAHMFLLSMPSP 683
             LL  M    + P + TY TL+ + C  ++                             
Sbjct: 233 TSLLNEMKQKSIPPDIFTYSTLIDALCKLSQ----------------------------- 263

Query: 684 GPDGQNVRDHVGSFLEMMHSEDRESKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYP 743
               +NVR     FLEM+H  +        ++V+D L K G  E+A  +     +K V P
Sbjct: 264 ---WENVRT---LFLEMIHL-NIYPNVCTFNSVIDGLCKEGKVEDAEEIMRYMIEKGVDP 316

Query: 744 DAV 746
           D +
Sbjct: 317 DVI 319


>gi|110741592|dbj|BAE98744.1| PPR-repeat protein [Arabidopsis thaliana]
          Length = 548

 Score =  147 bits (372), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 116/450 (25%), Positives = 207/450 (46%), Gaps = 61/450 (13%)

Query: 269 ERFSKPS-REMKIPAGLAPFS-----RHFASTGNVVESVSRILRQWKWGPLAE-----EA 317
           ER SK   R++K+   +  FS     R F S  +    +S I++  K+  +       E 
Sbjct: 54  ERLSKTRLRDIKLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEV 113

Query: 318 LGNTNYSMDAYQANQVLKQLQ---DHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRAR 374
           LG  N   D Y  N V+         ++AL     + +  G++ D  T  ++V    R  
Sbjct: 114 LGIRN---DLYTFNIVINCFCCCFQVSLALSILGKMLK-LGYEPDRVTIGSLVNGFCRRN 169

Query: 375 QFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYC 434
           +      L+D+MV  G +P++V YN +I S  +   +N+A D FK+++  G  P+ VTY 
Sbjct: 170 RVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYT 229

Query: 435 TLI-----------------------------------DIHAKAGFLDVAMDMYKKMQAA 459
            L+                                   D   K G +  A +++++M   
Sbjct: 230 ALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRM 289

Query: 460 GLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSA 519
            + PD  TYS ++N L     +  A+Q+F  MV++GC+ ++V+YN +I    KA+  +  
Sbjct: 290 SIDPDIVTYSSLVNGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDG 349

Query: 520 LKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDL 579
           +KL+R+M   G   + VTY+ +++     G +D+A+  F++M      PD   Y +L+  
Sbjct: 350 MKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGG 409

Query: 580 WGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPS 639
               G + KA   +E M +  +  ++ T  +++    + G++ +A+ L   +   GLKP 
Sbjct: 410 LCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPD 469

Query: 640 LQTYTLLLS-CCTEARSPYDMGFCHELMAV 668
           + TYT ++S  CT+       G  HE+ A+
Sbjct: 470 IVTYTTMMSGLCTK-------GLLHEVEAL 492



 Score =  137 bits (346), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 84/294 (28%), Positives = 150/294 (51%), Gaps = 1/294 (0%)

Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLI 402
           A  FF  + R+ G + +  TYT +V  L  + ++    +LL  M++    PNV+TY+ L+
Sbjct: 209 AFDFFKEIERK-GIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALL 267

Query: 403 HSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLS 462
            ++ +   + EA ++F++M  +  +PD VTY +L++       +D A  M+  M + G  
Sbjct: 268 DAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLVNGLCLHDRIDEANQMFDLMVSKGCL 327

Query: 463 PDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKL 522
            D  +Y+ +IN   KA  ++   +LF EM  +G + N VTYN +I    +A +   A + 
Sbjct: 328 ADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEF 387

Query: 523 YRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGK 582
           +  M   G  PD  TY+I++  L   G L++A  +F +M+++    D   Y  ++    K
Sbjct: 388 FSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCK 447

Query: 583 AGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGL 636
            G V +AW  + ++   GL+P++ T  +++S     G L +   L   M   GL
Sbjct: 448 TGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGL 501



 Score =  122 bits (307), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 79/279 (28%), Positives = 137/279 (49%), Gaps = 8/279 (2%)

Query: 362 TYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQM 421
           TY+ ++    +  +     +L ++MVR    P++VTY+ L++     + ++EA  +F  M
Sbjct: 262 TYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLVNGLCLHDRIDEANQMFDLM 321

Query: 422 QVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHL 481
              GC  D V+Y TLI+   KA  ++  M ++++M   GL  +T TY+ +I    +AG +
Sbjct: 322 VSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDV 381

Query: 482 QAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIV 541
             A + F +M   G  P++ TYNI++         + AL ++ DMQ    + D VTY+ V
Sbjct: 382 DKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTV 441

Query: 542 MEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGL 601
           +  +   G ++EA ++F  +  K   PD   Y  ++      G + +    Y  M Q GL
Sbjct: 442 IRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGL 501

Query: 602 RPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSL 640
             N  T        L  G ++ +  L++ ML+ G  PSL
Sbjct: 502 MKNDCT--------LSDGDITLSAELIKKMLSCGYAPSL 532



 Score =  116 bits (291), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 115/476 (24%), Positives = 207/476 (43%), Gaps = 56/476 (11%)

Query: 363 YTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQ 422
           +  ++  + + +++  +  L  +M   G + ++ T+N +I+ +     ++ AL +  +M 
Sbjct: 88  FNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVSLALSILGKML 147

Query: 423 VVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQ 482
            +G EPDRVT  +L++   +   +  A+ +  KM   G  PD   Y+ II+ L K   + 
Sbjct: 148 KLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVN 207

Query: 483 AAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVM 542
            A   F E+  +G  PN+VTY  ++     +  +  A +L  DM      P+ +TYS ++
Sbjct: 208 DAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALL 267

Query: 543 EVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLR 602
           +     G + EA+ +F EM R +  PD   Y  LV+       + +A + ++ M+  G  
Sbjct: 268 DAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLVNGLCLHDRIDEANQMFDLMVSKGCL 327

Query: 603 PNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGFC 662
            +V + N+L++ F +  ++ D   L + M   GL  +  TY  L+            GF 
Sbjct: 328 ADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQ-----------GF- 375

Query: 663 HELMAVSGHPAHMFLLSMPSPG--PDGQNVRDHVGSFLE-------MMHSEDRESKRGLV 713
               A     A  F   M   G  PD       +G   +       ++  ED + +   +
Sbjct: 376 --FQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDL 433

Query: 714 D-----AVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAVK---------EKGMSYWLINLH 759
           D      V+  + K+G  EEA S++   + K + PD V           KG+ + +  L+
Sbjct: 434 DIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALY 493

Query: 760 -------------VMSDGTAVIALSRTLAWFRKQMLISGVGPSRI-DIVTGWGRRS 801
                         +SDG   I LS  L    K+ML  G  PS + DI +G  +++
Sbjct: 494 TKMKQEGLMKNDCTLSDGD--ITLSAELI---KKMLSCGYAPSLLKDIKSGVCKKA 544



 Score =  105 bits (261), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 84/323 (26%), Positives = 148/323 (45%), Gaps = 12/323 (3%)

Query: 400 RLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAA 459
           RL  +  R   LN+A+D+F  M      P  V +  L+    K    DV + + KKM+  
Sbjct: 55  RLSKTRLRDIKLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVL 114

Query: 460 GLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSA 519
           G+  D +T++++INC      +  A  +  +M+  G  P+ VT   ++    +      A
Sbjct: 115 GIRNDLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDA 174

Query: 520 LKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDL 579
           + L   M   G++PD V Y+ +++ L     +++A   F E+ RK   P+   Y  LV+ 
Sbjct: 175 VSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNG 234

Query: 580 WGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPS 639
              +     A      M++  + PNV T ++LL AF++ G++ +A  L + M+ + + P 
Sbjct: 235 LCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPD 294

Query: 640 LQTYTLLLS--CCTEARSPYDMGFCHELMAVSGHPAHMFLLSMPSPG-PDGQNVRDHVGS 696
           + TY+ L++  C  +     +  F  +LM   G  A +   +    G    + V D +  
Sbjct: 295 IVTYSSLVNGLCLHDRIDEANQMF--DLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKL 352

Query: 697 FLEMMHSEDRESKRGLVDAVVDF 719
           F EM       S+RGLV   V +
Sbjct: 353 FREM-------SQRGLVSNTVTY 368



 Score = 66.6 bits (161), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 42/147 (28%), Positives = 68/147 (46%)

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
           Q G   +  TY T++    +A       +   QM   G  P++ TYN L+        L 
Sbjct: 358 QRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELE 417

Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
           +AL +F+ MQ    + D VTY T+I    K G ++ A  ++  +   GL PD  TY+ ++
Sbjct: 418 KALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMM 477

Query: 473 NCLGKAGHLQAAHQLFCEMVNQGCIPN 499
           + L   G L     L+ +M  +G + N
Sbjct: 478 SGLCTKGLLHEVEALYTKMKQEGLMKN 504


>gi|224125710|ref|XP_002319656.1| predicted protein [Populus trichocarpa]
 gi|222858032|gb|EEE95579.1| predicted protein [Populus trichocarpa]
          Length = 487

 Score =  147 bits (372), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 83/293 (28%), Positives = 154/293 (52%), Gaps = 1/293 (0%)

Query: 357 KHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALD 416
           K D   Y  ++    +A +  +   +LD+M R G  P+VVT+N +I ++     ++ AL 
Sbjct: 41  KPDVFAYNAVISGFCKANRIESAKTVLDRMKRKGFSPDVVTHNIMIGTFCGKGKIDLALK 100

Query: 417 VFKQ-MQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCL 475
           VF++ ++   C+P  +TY  LI+ +   G +D A+ +  +M + GL PDTFTY+VI   L
Sbjct: 101 VFEELLKDNNCKPTLITYTILIEAYILEGGIDEALKLLDEMLSRGLEPDTFTYNVITRGL 160

Query: 476 GKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDK 535
            K G +  A +    + ++GC P+++TYNI++        +    K   ++ + G EP+ 
Sbjct: 161 CKEGKVDRAFEFVRTLNSRGCKPDVITYNILLRALLNQGKWDEGEKWMSEIFSRGCEPNV 220

Query: 536 VTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEA 595
           VTYSI++  L   G ++E+  +   M+ K   PD   Y  L+  + + G +  A E+ + 
Sbjct: 221 VTYSILISSLCRDGKIEESVNLVKVMKEKGLTPDAYCYDPLIAAFCREGKLDMAIEFLDC 280

Query: 596 MLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
           M+  G  P++   N++++A  + G    A  +   +  +G  P++ +Y  +LS
Sbjct: 281 MICDGFLPDIVNYNTIMAALCKNGNGDHAVEIFGKLDEVGCPPNVSSYNTMLS 333



 Score =  144 bits (362), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 87/323 (26%), Positives = 154/323 (47%), Gaps = 2/323 (0%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDG-CQPNVVTYNRLIHSYGRANY 410
           ++ GF  D  T+  M+G      +     K+ +++++D  C+P ++TY  LI +Y     
Sbjct: 71  KRKGFSPDVVTHNIMIGTFCGKGKIDLALKVFEELLKDNNCKPTLITYTILIEAYILEGG 130

Query: 411 LNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSV 470
           ++EAL +  +M   G EPD  TY  +     K G +D A +  + + + G  PD  TY++
Sbjct: 131 IDEALKLLDEMLSRGLEPDTFTYNVITRGLCKEGKVDRAFEFVRTLNSRGCKPDVITYNI 190

Query: 471 IINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAG 530
           ++  L   G      +   E+ ++GC PN+VTY+I+I+   +    + ++ L + M+  G
Sbjct: 191 LLRALLNQGKWDEGEKWMSEIFSRGCEPNVVTYSILISSLCRDGKIEESVNLVKVMKEKG 250

Query: 531 FEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAW 590
             PD   Y  ++      G LD A      M    ++PD   Y  ++    K GN   A 
Sbjct: 251 LTPDAYCYDPLIAAFCREGKLDMAIEFLDCMICDGFLPDIVNYNTIMAALCKNGNGDHAV 310

Query: 591 EWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSC- 649
           E +  + + G  PNV + N++LSA    G    A  ++  ML+ G+ P + TY  L+SC 
Sbjct: 311 EIFGKLDEVGCPPNVSSYNTMLSALWSSGDRYRALGMISQMLSKGIDPDVITYNSLISCL 370

Query: 650 CTEARSPYDMGFCHELMAVSGHP 672
           C +      +G   ++++    P
Sbjct: 371 CRDGMVDEAIGLLADMLSGRFQP 393



 Score =  126 bits (316), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 76/293 (25%), Positives = 140/293 (47%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           G + D  TY  +   L +  +     + +  +   GC+P+V+TYN L+ +       +E 
Sbjct: 145 GLEPDTFTYNVITRGLCKEGKVDRAFEFVRTLNSRGCKPDVITYNILLRALLNQGKWDEG 204

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
                ++   GCEP+ VTY  LI    + G ++ ++++ K M+  GL+PD + Y  +I  
Sbjct: 205 EKWMSEIFSRGCEPNVVTYSILISSLCRDGKIEESVNLVKVMKEKGLTPDAYCYDPLIAA 264

Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPD 534
             + G L  A +    M+  G +P++V YN ++A   K  N   A++++  +   G  P+
Sbjct: 265 FCREGKLDMAIEFLDCMICDGFLPDIVNYNTIMAALCKNGNGDHAVEIFGKLDEVGCPPN 324

Query: 535 KVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYE 594
             +Y+ ++  L   G    A  + ++M  K   PD   Y  L+    + G V +A     
Sbjct: 325 VSSYNTMLSALWSSGDRYRALGMISQMLSKGIDPDVITYNSLISCLCRDGMVDEAIGLLA 384

Query: 595 AMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
            ML    +PN+ +  ++L    +  ++ DA  +L  M+  G +P+  TYTLL+
Sbjct: 385 DMLSGRFQPNIVSYKTVLLGLCKAHRIDDAIEVLAAMIENGCQPNETTYTLLI 437



 Score =  125 bits (314), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 85/314 (27%), Positives = 143/314 (45%), Gaps = 1/314 (0%)

Query: 342 VALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRL 401
           +AL  F  L +    K    TYT ++             KLLD+M+  G +P+  TYN +
Sbjct: 97  LALKVFEELLKDNNCKPTLITYTILIEAYILEGGIDEALKLLDEMLSRGLEPDTFTYNVI 156

Query: 402 IHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGL 461
                +   ++ A +  + +   GC+PD +TY  L+      G  D       ++ + G 
Sbjct: 157 TRGLCKEGKVDRAFEFVRTLNSRGCKPDVITYNILLRALLNQGKWDEGEKWMSEIFSRGC 216

Query: 462 SPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALK 521
            P+  TYS++I+ L + G ++ +  L   M  +G  P+   Y+ +IA   +      A++
Sbjct: 217 EPNVVTYSILISSLCRDGKIEESVNLVKVMKEKGLTPDAYCYDPLIAAFCREGKLDMAIE 276

Query: 522 LYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWG 581
               M   GF PD V Y+ +M  L   G  D A  +F ++      P+   Y  ++    
Sbjct: 277 FLDCMICDGFLPDIVNYNTIMAALCKNGNGDHAVEIFGKLDEVGCPPNVSSYNTMLSALW 336

Query: 582 KAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQ 641
            +G+  +A      ML  G+ P+V T NSL+S   R G + +A  LL  ML+   +P++ 
Sbjct: 337 SSGDRYRALGMISQMLSKGIDPDVITYNSLISCLCRDGMVDEAIGLLADMLSGRFQPNIV 396

Query: 642 TY-TLLLSCCTEAR 654
           +Y T+LL  C   R
Sbjct: 397 SYKTVLLGLCKAHR 410



 Score =  124 bits (311), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 86/304 (28%), Positives = 143/304 (47%), Gaps = 2/304 (0%)

Query: 326 DAYQANQVLKQLQDHTVALGFFNWLR--RQAGFKHDEHTYTTMVGILGRARQFGAINKLL 383
           D +  N + + L         F ++R     G K D  TY  ++  L    ++    K +
Sbjct: 149 DTFTYNVITRGLCKEGKVDRAFEFVRTLNSRGCKPDVITYNILLRALLNQGKWDEGEKWM 208

Query: 384 DQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKA 443
            ++   GC+PNVVTY+ LI S  R   + E++++ K M+  G  PD   Y  LI    + 
Sbjct: 209 SEIFSRGCEPNVVTYSILISSLCRDGKIEESVNLVKVMKEKGLTPDAYCYDPLIAAFCRE 268

Query: 444 GFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTY 503
           G LD+A++    M   G  PD   Y+ I+  L K G+   A ++F ++   GC PN+ +Y
Sbjct: 269 GKLDMAIEFLDCMICDGFLPDIVNYNTIMAALCKNGNGDHAVEIFGKLDEVGCPPNVSSY 328

Query: 504 NIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRR 563
           N M++    + +   AL +   M + G +PD +TY+ ++  L   G +DEA  + A+M  
Sbjct: 329 NTMLSALWSSGDRYRALGMISQMLSKGIDPDVITYNSLISCLCRDGMVDEAIGLLADMLS 388

Query: 564 KNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSD 623
             + P+   Y  ++    KA  +  A E   AM++ G +PN  T   L+      G  + 
Sbjct: 389 GRFQPNIVSYKTVLLGLCKAHRIDDAIEVLAAMIENGCQPNETTYTLLIEGIGFSGSRTQ 448

Query: 624 AYHL 627
           A  L
Sbjct: 449 AMEL 452



 Score = 97.4 bits (241), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 62/223 (27%), Positives = 113/223 (50%), Gaps = 2/223 (0%)

Query: 427 EPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQ 486
           +PD +    LI     +  +D A  +   ++  G  PD F Y+ +I+   KA  +++A  
Sbjct: 7   QPDVILCTKLIKGFFNSRNIDKATRVMGILEKHG-KPDVFAYNAVISGFCKANRIESAKT 65

Query: 487 LFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRD-MQNAGFEPDKVTYSIVMEVL 545
           +   M  +G  P++VT+NIMI           ALK++ + +++   +P  +TY+I++E  
Sbjct: 66  VLDRMKRKGFSPDVVTHNIMIGTFCGKGKIDLALKVFEELLKDNNCKPTLITYTILIEAY 125

Query: 546 GHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNV 605
              G +DEA  +  EM  +   PD   Y ++     K G V +A+E+   +   G +P+V
Sbjct: 126 ILEGGIDEALKLLDEMLSRGLEPDTFTYNVITRGLCKEGKVDRAFEFVRTLNSRGCKPDV 185

Query: 606 PTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
            T N LL A L  G+  +    +  + + G +P++ TY++L+S
Sbjct: 186 ITYNILLRALLNQGKWDEGEKWMSEIFSRGCEPNVVTYSILIS 228


>gi|357436523|ref|XP_003588537.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355477585|gb|AES58788.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 653

 Score =  147 bits (372), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 99/350 (28%), Positives = 173/350 (49%), Gaps = 26/350 (7%)

Query: 352 RQAGFKHDEHTYTTMV---GILGRARQFGAINKLLDQMVRDG-CQPNVVTYNRLIHSYGR 407
           +++GF+    TY+ ++   GI+G++   G   KLLD M+ DG  +P++ TYN LI +  +
Sbjct: 171 KESGFRPSTGTYSNLIKGYGIVGKS---GEAMKLLDLMLTDGNSKPDLQTYNMLIKALCQ 227

Query: 408 ANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFT 467
           +  ++EA ++  +M   G  PD VT+ T+   +        A  M  +MQ  GL P+  T
Sbjct: 228 SGNMSEAWNIVCKMPASGMLPDSVTFNTMAIGYVLNSETAEAEAMILEMQRKGLEPNERT 287

Query: 468 YSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMI-----------------ALQ 510
           ++VI+N   K G ++ A Q    + + G  PNL+ +N++I                    
Sbjct: 288 FTVIVNGYYKEGQIKEALQFVYRIKDLGFKPNLLVFNVLINGFVDRMDRDGVDEFSNTFA 347

Query: 511 AKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDE 570
            + +N  +   + R M+    +PD VTYS +M      G+ D+ + +F  M +    PD 
Sbjct: 348 QEGKNQVTTPLVLRLMKEFQIQPDVVTYSTIMNAWSQAGFQDKCKQIFDNMLQSGVKPDV 407

Query: 571 PVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQG 630
             Y +LV  + ++    KA E    M+++G+RPNV T  +++S +   G++ +A  +   
Sbjct: 408 HAYSILVKGYVRSMETEKAEELLGDMIESGVRPNVVTFTNVISGWGSSGRMDNAIKIFDK 467

Query: 631 MLNLGLKPSLQTYTLLLSCCTEARSPYDMGFCHELM-AVSGHPAH-MFLL 678
           M  LG+ P+L+T+  L+    +A  P+      +LM     HP    FLL
Sbjct: 468 MCELGVSPNLRTFEALIWGYAKADQPWKSEEILQLMEEFHVHPKKSTFLL 517



 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 77/313 (24%), Positives = 152/313 (48%), Gaps = 28/313 (8%)

Query: 364 TTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQV 423
           T ++ IL    +  A N +  +++ +G QP+++TY  L+H+            +  Q++ 
Sbjct: 78  TKLLNILIVCGKPQAANVIFKKLIEEGHQPSLITYTSLLHALTMQKCFKSIHSLVSQVEE 137

Query: 424 VGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQA 483
              + + + Y  +I+  A++G ++ A    +KM+ +G  P T TYS +I   G  G    
Sbjct: 138 KQMKTNSIFYNAVINAFAESGNMEDAKKTVQKMKESGFRPSTGTYSNLIKGYGIVGKSGE 197

Query: 484 AHQLFCEMVNQG-CIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVM 542
           A +L   M+  G   P+L TYN++I    ++ N   A  +   M  +G  PD VT++ + 
Sbjct: 198 AMKLLDLMLTDGNSKPDLQTYNMLIKALCQSGNMSEAWNIVCKMPASGMLPDSVTFNTMA 257

Query: 543 EVLGHCGYL-----DEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAML 597
                 GY+      EAEA+  EM+RK   P+E  + ++V+ + K G +++A ++   + 
Sbjct: 258 -----IGYVLNSETAEAEAMILEMQRKGLEPNERTFTVIVNGYYKEGQIKEALQFVYRIK 312

Query: 598 QAGLRPNVPTCNSLLSAFLR------VGQLSDAYH-----------LLQGMLNLGLKPSL 640
             G +PN+   N L++ F+       V + S+ +            +L+ M    ++P +
Sbjct: 313 DLGFKPNLLVFNVLINGFVDRMDRDGVDEFSNTFAQEGKNQVTTPLVLRLMKEFQIQPDV 372

Query: 641 QTYTLLLSCCTEA 653
            TY+ +++  ++A
Sbjct: 373 VTYSTIMNAWSQA 385



 Score = 86.7 bits (213), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 72/298 (24%), Positives = 132/298 (44%), Gaps = 31/298 (10%)

Query: 354 AGFKHDEHTYTTM-VGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
           +G   D  T+ TM +G +  +    A   +L+ M R G +PN  T+  +++ Y +   + 
Sbjct: 244 SGMLPDSVTFNTMAIGYVLNSETAEAEAMILE-MQRKGLEPNERTFTVIVNGYYKEGQIK 302

Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMD--------------------- 451
           EAL    +++ +G +P+ + +  LI+     GF+D  MD                     
Sbjct: 303 EALQFVYRIKDLGFKPNLLVFNVLIN-----GFVD-RMDRDGVDEFSNTFAQEGKNQVTT 356

Query: 452 --MYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIAL 509
             + + M+   + PD  TYS I+N   +AG      Q+F  M+  G  P++  Y+I++  
Sbjct: 357 PLVLRLMKEFQIQPDVVTYSTIMNAWSQAGFQDKCKQIFDNMLQSGVKPDVHAYSILVKG 416

Query: 510 QAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPD 569
             ++   + A +L  DM  +G  P+ VT++ V+   G  G +D A  +F +M      P+
Sbjct: 417 YVRSMETEKAEELLGDMIESGVRPNVVTFTNVISGWGSSGRMDNAIKIFDKMCELGVSPN 476

Query: 570 EPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHL 627
              +  L+  + KA    K+ E  + M +  + P   T   +  A+   G   +A  L
Sbjct: 477 LRTFEALIWGYAKADQPWKSEEILQLMEEFHVHPKKSTFLLVSKAWRFAGLTEEAIRL 534



 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 55/206 (26%), Positives = 97/206 (47%), Gaps = 10/206 (4%)

Query: 283 GLAPFSRHFASTGNVVESVSRILRQWKWGPLAEEALGNTNYSMDAY-QANQVLKQLQDHT 341
           G+  FS  FA  G    +   +LR  K   +  + +  +   M+A+ QA       QD  
Sbjct: 338 GVDEFSNTFAQEGKNQVTTPLVLRLMKEFQIQPDVVTYSTI-MNAWSQAG-----FQDKC 391

Query: 342 VALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRL 401
             + F N L  Q+G K D H Y+ +V    R+ +     +LL  M+  G +PNVVT+  +
Sbjct: 392 KQI-FDNML--QSGVKPDVHAYSILVKGYVRSMETEKAEELLGDMIESGVRPNVVTFTNV 448

Query: 402 IHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGL 461
           I  +G +  ++ A+ +F +M  +G  P+  T+  LI  +AKA     + ++ + M+   +
Sbjct: 449 ISGWGSSGRMDNAIKIFDKMCELGVSPNLRTFEALIWGYAKADQPWKSEEILQLMEEFHV 508

Query: 462 SPDTFTYSVIINCLGKAGHLQAAHQL 487
            P   T+ ++      AG  + A +L
Sbjct: 509 HPKKSTFLLVSKAWRFAGLTEEAIRL 534


>gi|15222409|ref|NP_176529.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75205330|sp|Q9SH26.1|PP102_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g63400
 gi|6633845|gb|AAF19704.1|AC008047_11 F2K11.22 [Arabidopsis thaliana]
 gi|332195974|gb|AEE34095.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 577

 Score =  147 bits (372), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 100/366 (27%), Positives = 178/366 (48%), Gaps = 2/366 (0%)

Query: 382 LLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHA 441
           L+DQMV  G +P+ +T+  LIH     N  +EA+ +  +M   GC+P+ VTY  +++   
Sbjct: 177 LVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLC 236

Query: 442 KAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLV 501
           K G +D+A ++  KM+AA +  +   YS +I+ L K  H   A  LF EM N+G  PN++
Sbjct: 237 KRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVI 296

Query: 502 TYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEM 561
           TY+ +I+       +  A +L  DM      P+ VT++ +++     G L EAE ++ EM
Sbjct: 297 TYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEM 356

Query: 562 RRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQL 621
            +++  PD   Y  L++ +     + +A   +E M+     PNV T N+L++ F +  ++
Sbjct: 357 IKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRI 416

Query: 622 SDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGFCHELMAVSG-HPAHMFLLSM 680
            +   L + M   GL  +  TYT L+    +AR   +     + M   G HP  M   ++
Sbjct: 417 DEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTL 476

Query: 681 PSPGPDGQNVRDHVGSFLEMMHSEDRESKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKN 740
                    +   +  F E +     E      + +++ + K+G  E+   ++   + K 
Sbjct: 477 LDGLCKNGKLEKAMVVF-EYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKG 535

Query: 741 VYPDAV 746
           V PD +
Sbjct: 536 VKPDVI 541



 Score =  139 bits (350), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 85/296 (28%), Positives = 152/296 (51%), Gaps = 1/296 (0%)

Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLI 402
           AL  F  +  + G + +  TY++++  L    ++   ++LL  M+     PNVVT+N LI
Sbjct: 279 ALNLFTEMENK-GVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALI 337

Query: 403 HSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLS 462
            ++ +   L EA  ++ +M     +PD  TY +LI+       LD A  M++ M +    
Sbjct: 338 DAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCF 397

Query: 463 PDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKL 522
           P+  TY+ +IN   KA  +    +LF EM  +G + N VTY  +I    +AR+  +A  +
Sbjct: 398 PNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMV 457

Query: 523 YRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGK 582
           ++ M + G  P+ +TY+ +++ L   G L++A  VF  ++R    P    Y ++++   K
Sbjct: 458 FKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCK 517

Query: 583 AGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKP 638
           AG V   W+ + ++   G++P+V   N+++S F R G   +A  L + M   G  P
Sbjct: 518 AGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKMREDGPLP 573



 Score =  137 bits (345), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 89/320 (27%), Positives = 147/320 (45%), Gaps = 13/320 (4%)

Query: 347 FNWLRRQAGFKHDEHT--YTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHS 404
           FN L +    K + +   Y+T++  L + R       L  +M   G +PNV+TY+ LI  
Sbjct: 245 FNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISC 304

Query: 405 YGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPD 464
                  ++A  +   M      P+ VT+  LID   K G L  A  +Y +M    + PD
Sbjct: 305 LCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPD 364

Query: 465 TFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYR 524
            FTYS +IN       L  A  +F  M+++ C PN+VTYN +I    KA+     ++L+R
Sbjct: 365 IFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFR 424

Query: 525 DMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAG 584
           +M   G   + VTY+ ++         D A+ VF +M      P+   Y  L+D   K G
Sbjct: 425 EMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNG 484

Query: 585 NVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYT 644
            + KA   +E + ++ + P + T N ++    + G++ D + L   +   G+KP +  Y 
Sbjct: 485 KLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYN 544

Query: 645 LLLSCCTEARSPYDMGFCHE 664
            ++S           GFC +
Sbjct: 545 TMIS-----------GFCRK 553



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 89/317 (28%), Positives = 151/317 (47%), Gaps = 15/317 (4%)

Query: 363 YTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQ 422
           +  ++  + + ++F  +  L ++M R G   N+ TYN LI+ + R + ++ AL +  +M 
Sbjct: 88  FNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMM 147

Query: 423 VVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQ 482
            +G EP  VT  +L++ +     +  A+ +  +M   G  PDT T++ +I+ L       
Sbjct: 148 KLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKAS 207

Query: 483 AAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVM 542
            A  L   MV +GC PNLVTY +++    K  +   A  L   M+ A  E + V YS V+
Sbjct: 208 EAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVI 267

Query: 543 EVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLR 602
           + L    + D+A  +F EM  K   P+   Y  L+           A      M++  + 
Sbjct: 268 DSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKIN 327

Query: 603 PNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGFC 662
           PNV T N+L+ AF++ G+L +A  L   M+   + P + TY+ L++           GFC
Sbjct: 328 PNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLIN-----------GFC 376

Query: 663 -HELMAVSGHPAHMFLL 678
            H+ +       HMF L
Sbjct: 377 MHDRL---DEAKHMFEL 390



 Score = 98.2 bits (243), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 61/239 (25%), Positives = 118/239 (49%)

Query: 411 LNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSV 470
           L++A+ +F  M      P    +  L+   AK    D+ + + +KMQ  G+S + +TY++
Sbjct: 66  LDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNI 125

Query: 471 IINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAG 530
           +INC  +   +  A  L  +M+  G  P++VT + ++      +    A+ L   M   G
Sbjct: 126 LINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMG 185

Query: 531 FEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAW 590
           + PD +T++ ++  L       EA A+   M ++   P+   YG++V+   K G++  A+
Sbjct: 186 YRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAF 245

Query: 591 EWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSC 649
                M  A +  NV   ++++ +  +     DA +L   M N G++P++ TY+ L+SC
Sbjct: 246 NLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISC 304


>gi|30840221|emb|CAD61285.1| fertility restorer [Raphanus sativus]
 gi|32452380|emb|CAD80165.1| restorer of fertility pentatricopeptide repeat [Raphanus sativus]
 gi|32527602|gb|AAP86198.1| pentatricopeptide repeat-containing protein [Raphanus sativus]
 gi|90903522|gb|ABE02309.1| Rf [Raphanus sativus]
 gi|90903524|gb|ABE02310.1| Rf [Raphanus sativus]
 gi|157931524|gb|ABW04886.1| PPR [Raphanus sativus]
          Length = 687

 Score =  147 bits (372), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 120/420 (28%), Positives = 192/420 (45%), Gaps = 21/420 (5%)

Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLI 402
           AL FF+ +  +   + +  T+TT++  L R  +      LLD+M+ DG QP  +TY  ++
Sbjct: 168 ALDFFHQMF-ETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIV 226

Query: 403 HSYGRANYLNEALDVFKQMQVVG-CEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGL 461
               +      AL++ ++M+ V    P+ V Y  +ID   K G    A +++ +MQ  G+
Sbjct: 227 DGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGI 286

Query: 462 SPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALK 521
            PD FTY+ +I     +G    A QL  EM+ +   P++VTYN +I    K   +  A +
Sbjct: 287 FPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEE 346

Query: 522 LYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWG 581
           LY +M   G  P+ +TYS +++       LD AE +F  M  K   P+   +  L+D + 
Sbjct: 347 LYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYC 406

Query: 582 KAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQ 641
            A  +    E    M + GL  +  T N+L+  F  VG L+ A  LLQ M++ GL P + 
Sbjct: 407 GAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIV 466

Query: 642 TY-TLLLSCCTEARSPYDMGFCHELMAVSGHPAHMFLLSMPSPG--PDGQNVRDHV---- 694
           T  TLL   C   +    +    E+  V          S P  G  PD Q     +    
Sbjct: 467 TCDTLLDGLCDNGKLKDAL----EMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLI 522

Query: 695 --GSFLEMMHSEDRESKRGLV------DAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAV 746
             G FLE     +    RG+V       +++D L K    +EA  +++    K+  P+ V
Sbjct: 523 NEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVV 582



 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 86/298 (28%), Positives = 149/298 (50%), Gaps = 11/298 (3%)

Query: 362 TYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQM 421
           TY++M+    +  +  A   +   M   GC PN++T+N LI  Y  A  +++ +++  +M
Sbjct: 362 TYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEM 421

Query: 422 QVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHL 481
              G   D  TY TLI      G L+ A+D+ ++M ++GL PD  T   +++ L   G L
Sbjct: 422 TETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKL 481

Query: 482 QAAHQLFCEMVN-----------QGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAG 530
           + A ++F  M              G  P++ TYNI+I+       +  A +LY +M + G
Sbjct: 482 KDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRG 541

Query: 531 FEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAW 590
             PD +TYS +++ L     LDEA  +F  M  K++ P+   +  L++ + KAG V    
Sbjct: 542 IVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGL 601

Query: 591 EWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
           E +  M + G+  N  T  +L+  F +VG ++ A  + Q M++ G+ P   T   +L+
Sbjct: 602 ELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLT 659



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 94/294 (31%), Positives = 143/294 (48%), Gaps = 13/294 (4%)

Query: 376 FGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCT 435
           FG I KL       G  P+VVT+  L+H     + ++EALD F QM    C P+ VT+ T
Sbjct: 137 FGKITKL-------GLHPDVVTFTTLLHGLCVEDRVSEALDFFHQMFETTCRPNVVTFTT 189

Query: 436 LIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQG 495
           L++   + G +  A+ +  +M   GL P   TY  I++ + K G   +A  L  +M    
Sbjct: 190 LMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVS 249

Query: 496 -CIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHC--GYLD 552
             IPN+V Y+ +I    K   +  A  L+ +MQ  G  PD  TY+ +  ++G C  G   
Sbjct: 250 HIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSM--IVGFCSSGRWS 307

Query: 553 EAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLL 612
           +AE +  EM  +   PD   Y  L++ + K G   +A E Y+ ML  G+ PN  T +S++
Sbjct: 308 DAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMI 367

Query: 613 SAFLRVGQLSDAYHLLQGMLNLGLKPSLQTY-TLLLSCCTEARSPYDMGFCHEL 665
             F +  +L  A H+   M   G  P+L T+ TL+   C   R    M   HE+
Sbjct: 368 DGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEM 421



 Score =  133 bits (334), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 93/354 (26%), Positives = 161/354 (45%), Gaps = 47/354 (13%)

Query: 340 HTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYN 399
           H+ A   F  ++ +  F  D  TY +M+     + ++    +LL +M+     P+VVTYN
Sbjct: 271 HSDAQNLFTEMQEKGIFP-DLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYN 329

Query: 400 RLIHS-----------------------------------YGRANYLNEALDVFKQMQVV 424
            LI++                                   + + N L+ A  +F  M   
Sbjct: 330 ALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATK 389

Query: 425 GCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAA 484
           GC P+ +T+ TLID +  A  +D  M++  +M   GL  DT TY+ +I+     G L AA
Sbjct: 390 GCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAA 449

Query: 485 HQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNA-----------GFEP 533
             L  EM++ G  P++VT + ++         + AL++++ MQ +           G EP
Sbjct: 450 LDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEP 509

Query: 534 DKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWY 593
           D  TY+I++  L + G   EAE ++ EM  +  VPD   Y  ++D   K   + +A + +
Sbjct: 510 DVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMF 569

Query: 594 EAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
           ++M      PNV T  +L++ + + G++ D   L   M   G+  +  TY  L+
Sbjct: 570 DSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLI 623



 Score =  132 bits (332), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 84/296 (28%), Positives = 148/296 (50%), Gaps = 15/296 (5%)

Query: 349 WLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRA 408
           +L    G   +  T+ T++     A++     +LL +M   G   +  TYN LIH +   
Sbjct: 384 YLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLV 443

Query: 409 NYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAA--------- 459
             LN ALD+ ++M   G  PD VT  TL+D     G L  A++M+K MQ +         
Sbjct: 444 GDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHP 503

Query: 460 --GLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQ 517
             G+ PD  TY+++I+ L   G    A +L+ EM ++G +P+ +TY+ MI    K     
Sbjct: 504 FNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLD 563

Query: 518 SALKLYRDMQNAGFEPDKVTYSIVMEVLGHC--GYLDEAEAVFAEMRRKNWVPDEPVYGL 575
            A +++  M +  F P+ VT++ ++   G+C  G +D+   +F EM R+  V +   Y  
Sbjct: 564 EATQMFDSMGSKSFSPNVVTFTTLIN--GYCKAGRVDDGLELFCEMGRRGIVANAITYIT 621

Query: 576 LVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGM 631
           L+  + K GN+  A + ++ M+ +G+ P+  T  ++L+      +L  A  +L+ +
Sbjct: 622 LICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRAVAMLEKL 677



 Score =  119 bits (298), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 82/317 (25%), Positives = 150/317 (47%), Gaps = 14/317 (4%)

Query: 363 YTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQ 422
           +  ++G++ R  +   +  L  +M R   + ++ ++N LI  +   + L  AL  F ++ 
Sbjct: 82  FCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFNILIKCFCSCSKLPFALSTFGKIT 141

Query: 423 VVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQ 482
            +G  PD VT+ TL+        +  A+D + +M      P+  T++ ++N L + G + 
Sbjct: 142 KLGLHPDVVTFTTLLHGLCVEDRVSEALDFFHQMFETTCRPNVVTFTTLMNGLCREGRIV 201

Query: 483 AAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAG-FEPDKVTYSIV 541
            A  L   M+  G  P  +TY  ++    K  +  SAL L R M+      P+ V YS +
Sbjct: 202 EAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAI 261

Query: 542 MEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGL 601
           ++ L   G   +A+ +F EM+ K   PD   Y  ++  +  +G    A +  + ML+  +
Sbjct: 262 IDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKI 321

Query: 602 RPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGF 661
            P+V T N+L++AF++ G+  +A  L   ML  G+ P+  TY+ ++            GF
Sbjct: 322 SPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMID-----------GF 370

Query: 662 CHELMAVSGHPAHMFLL 678
           C +    +    HMF L
Sbjct: 371 CKQNRLDAAE--HMFYL 385



 Score =  100 bits (249), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 68/272 (25%), Positives = 124/272 (45%), Gaps = 9/272 (3%)

Query: 382 LLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHA 441
           L   M+R    P+VV + +L+    R    +  + ++++M+      D  ++  LI    
Sbjct: 66  LFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFNILIKCFC 125

Query: 442 KAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLV 501
               L  A+  + K+   GL PD  T++ +++ L     +  A   F +M    C PN+V
Sbjct: 126 SCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALDFFHQMFETTCRPNVV 185

Query: 502 TYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEM 561
           T+  ++    +      A+ L   M   G +P ++TY  +++  G C   D   A+   +
Sbjct: 186 TFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVD--GMCKKGDTVSAL--NL 241

Query: 562 RRK-----NWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFL 616
            RK     + +P+  +Y  ++D   K G    A   +  M + G+ P++ T NS++  F 
Sbjct: 242 LRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFC 301

Query: 617 RVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
             G+ SDA  LLQ ML   + P + TY  L++
Sbjct: 302 SSGRWSDAEQLLQEMLERKISPDVVTYNALIN 333



 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 61/246 (24%), Positives = 113/246 (45%), Gaps = 2/246 (0%)

Query: 411 LNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSV 470
           L +A+D+F  M      P  V +C L+ +  +    D+ + +Y+KM+   +  D +++++
Sbjct: 60  LEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFNI 119

Query: 471 IINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAG 530
           +I C      L  A   F ++   G  P++VT+  ++           AL  +  M    
Sbjct: 120 LIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALDFFHQMFETT 179

Query: 531 FEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAW 590
             P+ VT++ +M  L   G + EA A+   M      P +  YG +VD   K G+   A 
Sbjct: 180 CRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSAL 239

Query: 591 EWYEAMLQAG-LRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTY-TLLLS 648
                M +   + PNV   ++++ +  + G+ SDA +L   M   G+ P L TY ++++ 
Sbjct: 240 NLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVG 299

Query: 649 CCTEAR 654
            C+  R
Sbjct: 300 FCSSGR 305


>gi|242058301|ref|XP_002458296.1| hypothetical protein SORBIDRAFT_03g030790 [Sorghum bicolor]
 gi|241930271|gb|EES03416.1| hypothetical protein SORBIDRAFT_03g030790 [Sorghum bicolor]
          Length = 1035

 Score =  147 bits (372), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 99/407 (24%), Positives = 189/407 (46%), Gaps = 11/407 (2%)

Query: 362 TYTTMVGIL---GRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVF 418
           TY +++  L   GR R+        D M+  G +P+V TY  ++H Y     L+E  D+ 
Sbjct: 310 TYGSLLNYLCKNGRCRE---ARFFFDSMIGKGIKPSVTTYGIMLHGYATKGALSEMHDLL 366

Query: 419 KQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKA 478
             M   G  P+   +      +AK G +D AMD++ KM+  GLSPD  +Y  +I+ L K 
Sbjct: 367 NLMVANGISPNHHIFNIFFSAYAKCGIIDKAMDIFNKMRQQGLSPDAVSYGALIDALCKL 426

Query: 479 GHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTY 538
           G +  A   F +M+N+G  P++V ++ ++        ++   +L+ +M N G  P+ V +
Sbjct: 427 GRVDDAEVKFNQMINEGVTPDIVVFSSLVYGLCTVDKWEKVEELFFEMLNVGIHPNIVFF 486

Query: 539 SIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQ 598
           + ++  L   G + E + +   +      PD   Y  L+D    AG + +A +  E M+ 
Sbjct: 487 NTILCNLCKEGRVMEGQRLVDSIECMGVRPDVISYNTLIDGHCLAGTIDEASKLLEGMVS 546

Query: 599 AGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYD 658
            GL+P+  + N+LL  + + G++  AY   + ML+ G+ P + TY  +L    + +   +
Sbjct: 547 VGLKPDSFSYNTLLHGYCKAGRIDSAYSHFRKMLSNGITPGVVTYNTILHGLFQTKRFSE 606

Query: 659 MGFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRESKRGLVDAVVD 718
               +  M  SG    ++  ++   G    N  D      + + S+  +      + ++ 
Sbjct: 607 AKELYLNMINSGTKWDIYTYNIILNGLCKSNCVDEAIKMFQNLCSKGLQLNIITFNIMIG 666

Query: 719 FLHKSGLKEEAGSVWEVAAQKNVYPDAVKEKGMSYWLINLHVMSDGT 765
            L K G KE+A  ++       +  + V     +Y L+  +++ +G+
Sbjct: 667 ALLKGGRKEDAMDLFAAIPANGLVQNVV-----TYRLVVENLIEEGS 708



 Score =  146 bits (368), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 86/296 (29%), Positives = 144/296 (48%), Gaps = 4/296 (1%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           G K    TY  M+           ++ LL+ MV +G  PN   +N    +Y +   +++A
Sbjct: 338 GIKPSVTTYGIMLHGYATKGALSEMHDLLNLMVANGISPNHHIFNIFFSAYAKCGIIDKA 397

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
           +D+F +M+  G  PD V+Y  LID   K G +D A   + +M   G++PD   +S ++  
Sbjct: 398 MDIFNKMRQQGLSPDAVSYGALIDALCKLGRVDDAEVKFNQMINEGVTPDIVVFSSLVYG 457

Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPD 534
           L      +   +LF EM+N G  PN+V +N ++    K        +L   ++  G  PD
Sbjct: 458 LCTVDKWEKVEELFFEMLNVGIHPNIVFFNTILCNLCKEGRVMEGQRLVDSIECMGVRPD 517

Query: 535 KVTYSIVMEVLGHC--GYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEW 592
            ++Y+ +++  GHC  G +DEA  +   M      PD   Y  L+  + KAG +  A+  
Sbjct: 518 VISYNTLID--GHCLAGTIDEASKLLEGMVSVGLKPDSFSYNTLLHGYCKAGRIDSAYSH 575

Query: 593 YEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
           +  ML  G+ P V T N++L    +  + S+A  L   M+N G K  + TY ++L+
Sbjct: 576 FRKMLSNGITPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKWDIYTYNIILN 631



 Score =  142 bits (357), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 87/299 (29%), Positives = 142/299 (47%), Gaps = 12/299 (4%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           G   D  TYTT++  L +A+ F     +  QM+ +G +PN+ TYN LIH Y       E 
Sbjct: 233 GIPPDVVTYTTVIDGLCKAQLFDRAEAVFQQMIDNGVKPNIDTYNCLIHGYLSIGKWKEV 292

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
           + + ++M   G +P+  TY +L++   K G    A   +  M   G+ P   TY ++++ 
Sbjct: 293 VRMLEEMSAGGPKPNCCTYGSLLNYLCKNGRCREARFFFDSMIGKGIKPSVTTYGIMLHG 352

Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPD 534
               G L   H L   MV  G  PN   +NI  +  AK      A+ ++  M+  G  PD
Sbjct: 353 YATKGALSEMHDLLNLMVANGISPNHHIFNIFFSAYAKCGIIDKAMDIFNKMRQQGLSPD 412

Query: 535 KVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPD-----EPVYGLL-VDLWGKAGNVRK 588
            V+Y  +++ L   G +D+AE  F +M  +   PD       VYGL  VD W       K
Sbjct: 413 AVSYGALIDALCKLGRVDDAEVKFNQMINEGVTPDIVVFSSLVYGLCTVDKW------EK 466

Query: 589 AWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
             E +  ML  G+ PN+   N++L    + G++ +   L+  +  +G++P + +Y  L+
Sbjct: 467 VEELFFEMLNVGIHPNIVFFNTILCNLCKEGRVMEGQRLVDSIECMGVRPDVISYNTLI 525



 Score =  128 bits (322), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 101/376 (26%), Positives = 160/376 (42%), Gaps = 42/376 (11%)

Query: 321 TNYSMDAYQANQVLKQLQD-HTVALGFFNWLRR--QAGFKHDEHTYTTMVGILGRARQFG 377
           T + MD    NQ+L  L D   V       L+R  + G   D  +Y  ++  L   ++  
Sbjct: 123 TGWRMDHIVINQLLNGLCDGKRVGEAMDVLLQRMPELGCMPDTVSYNILLKGLCNEKRAE 182

Query: 378 AINKLLDQMVRD---GCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYC 434
              +LL  M  D    C PNVV+Y+ +I+ +     +++  ++F +M   G  PD VTY 
Sbjct: 183 EALELLHMMADDQVWSCPPNVVSYSTVINGFFTEGQVDKPYNLFLEMMDRGIPPDVVTYT 242

Query: 435 TLIDIHAKAGFLDVA-----------------------------------MDMYKKMQAA 459
           T+ID   KA   D A                                   + M ++M A 
Sbjct: 243 TVIDGLCKAQLFDRAEAVFQQMIDNGVKPNIDTYNCLIHGYLSIGKWKEVVRMLEEMSAG 302

Query: 460 GLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSA 519
           G  P+  TY  ++N L K G  + A   F  M+ +G  P++ TY IM+   A        
Sbjct: 303 GPKPNCCTYGSLLNYLCKNGRCREARFFFDSMIGKGIKPSVTTYGIMLHGYATKGALSEM 362

Query: 520 LKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDL 579
             L   M   G  P+   ++I       CG +D+A  +F +MR++   PD   YG L+D 
Sbjct: 363 HDLLNLMVANGISPNHHIFNIFFSAYAKCGIIDKAMDIFNKMRQQGLSPDAVSYGALIDA 422

Query: 580 WGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPS 639
             K G V  A   +  M+  G+ P++   +SL+     V +      L   MLN+G+ P+
Sbjct: 423 LCKLGRVDDAEVKFNQMINEGVTPDIVVFSSLVYGLCTVDKWEKVEELFFEMLNVGIHPN 482

Query: 640 LQTY-TLLLSCCTEAR 654
           +  + T+L + C E R
Sbjct: 483 IVFFNTILCNLCKEGR 498



 Score =  126 bits (317), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 79/301 (26%), Positives = 150/301 (49%), Gaps = 1/301 (0%)

Query: 347 FNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYG 406
           FN +  + G   D   ++++V  L    ++  + +L  +M+  G  PN+V +N ++ +  
Sbjct: 436 FNQMINE-GVTPDIVVFSSLVYGLCTVDKWEKVEELFFEMLNVGIHPNIVFFNTILCNLC 494

Query: 407 RANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTF 466
           +   + E   +   ++ +G  PD ++Y TLID H  AG +D A  + + M + GL PD+F
Sbjct: 495 KEGRVMEGQRLVDSIECMGVRPDVISYNTLIDGHCLAGTIDEASKLLEGMVSVGLKPDSF 554

Query: 467 TYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDM 526
           +Y+ +++   KAG + +A+  F +M++ G  P +VTYN ++    + + +  A +LY +M
Sbjct: 555 SYNTLLHGYCKAGRIDSAYSHFRKMLSNGITPGVVTYNTILHGLFQTKRFSEAKELYLNM 614

Query: 527 QNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNV 586
            N+G + D  TY+I++  L     +DEA  +F  +  K    +   + +++    K G  
Sbjct: 615 INSGTKWDIYTYNIILNGLCKSNCVDEAIKMFQNLCSKGLQLNIITFNIMIGALLKGGRK 674

Query: 587 RKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLL 646
             A + + A+   GL  NV T   ++   +  G L +   L   M   G  P+ Q    L
Sbjct: 675 EDAMDLFAAIPANGLVQNVVTYRLVVENLIEEGSLEEFDSLFSAMEKNGTAPNSQMLNAL 734

Query: 647 L 647
           +
Sbjct: 735 V 735



 Score =  120 bits (300), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 73/268 (27%), Positives = 141/268 (52%)

Query: 381 KLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIH 440
           +L+D +   G +P+V++YN LI  +  A  ++EA  + + M  VG +PD  +Y TL+  +
Sbjct: 504 RLVDSIECMGVRPDVISYNTLIDGHCLAGTIDEASKLLEGMVSVGLKPDSFSYNTLLHGY 563

Query: 441 AKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNL 500
            KAG +D A   ++KM + G++P   TY+ I++ L +      A +L+  M+N G   ++
Sbjct: 564 CKAGRIDSAYSHFRKMLSNGITPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKWDI 623

Query: 501 VTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAE 560
            TYNI++    K+     A+K+++++ + G + + +T++I++  L   G  ++A  +FA 
Sbjct: 624 YTYNIILNGLCKSNCVDEAIKMFQNLCSKGLQLNIITFNIMIGALLKGGRKEDAMDLFAA 683

Query: 561 MRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQ 620
           +     V +   Y L+V+   + G++ +    + AM + G  PN    N+L+   L  G 
Sbjct: 684 IPANGLVQNVVTYRLVVENLIEEGSLEEFDSLFSAMEKNGTAPNSQMLNALVRRLLHRGD 743

Query: 621 LSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
           +S A   L  +          T ++L+S
Sbjct: 744 ISRAGAYLSKLDERNFSVEASTTSMLIS 771



 Score =  112 bits (280), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 97/386 (25%), Positives = 159/386 (41%), Gaps = 17/386 (4%)

Query: 382 LLDQMVRD---GCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLID 438
           L ++MVRD      PN  TY+ LI  + R  +L      F  +   G   D +    L++
Sbjct: 78  LFNRMVRDCYIKVAPNRCTYSILIGCFCRMGHLEHGFAAFGLILKTGWRMDHIVINQLLN 137

Query: 439 IHAKAGFLDVAMD-MYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQ--- 494
                  +  AMD + ++M   G  PDT +Y++++  L      + A +L   M +    
Sbjct: 138 GLCDGKRVGEAMDVLLQRMPELGCMPDTVSYNILLKGLCNEKRAEEALELLHMMADDQVW 197

Query: 495 GCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEA 554
            C PN+V+Y+ +I              L+ +M + G  PD VTY+ V++ L      D A
Sbjct: 198 SCPPNVVSYSTVINGFFTEGQVDKPYNLFLEMMDRGIPPDVVTYTTVIDGLCKAQLFDRA 257

Query: 555 EAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSA 614
           EAVF +M      P+   Y  L+  +   G  ++     E M   G +PN  T  SLL+ 
Sbjct: 258 EAVFQQMIDNGVKPNIDTYNCLIHGYLSIGKWKEVVRMLEEMSAGGPKPNCCTYGSLLNY 317

Query: 615 FLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGFCHELMAVSG---- 670
             + G+  +A      M+  G+KPS+ TY ++L       +  +M     LM  +G    
Sbjct: 318 LCKNGRCREARFFFDSMIGKGIKPSVTTYGIMLHGYATKGALSEMHDLLNLMVANGISPN 377

Query: 671 -HPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRESKRGLVDAVVDFLHKSGLKEEA 729
            H  ++F  +    G     + D        M  +          A++D L K G  ++A
Sbjct: 378 HHIFNIFFSAYAKCG-----IIDKAMDIFNKMRQQGLSPDAVSYGALIDALCKLGRVDDA 432

Query: 730 GSVWEVAAQKNVYPDAVKEKGMSYWL 755
              +     + V PD V    + Y L
Sbjct: 433 EVKFNQMINEGVTPDIVVFSSLVYGL 458



 Score =  110 bits (276), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 73/323 (22%), Positives = 148/323 (45%), Gaps = 28/323 (8%)

Query: 354 AGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNE 413
            G K D  +Y T++    +A +  +      +M+ +G  P VVTYN ++H   +    +E
Sbjct: 547 VGLKPDSFSYNTLLHGYCKAGRIDSAYSHFRKMLSNGITPGVVTYNTILHGLFQTKRFSE 606

Query: 414 ALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIIN 473
           A +++  M   G + D  TY  +++   K+  +D A+ M++ + + GL  +  T++++I 
Sbjct: 607 AKELYLNMINSGTKWDIYTYNIILNGLCKSNCVDEAIKMFQNLCSKGLQLNIITFNIMIG 666

Query: 474 CLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEP 533
            L K G  + A  LF  +   G + N+VTY +++    +  + +    L+  M+  G  P
Sbjct: 667 ALLKGGRKEDAMDLFAAIPANGLVQNVVTYRLVVENLIEEGSLEEFDSLFSAMEKNGTAP 726

Query: 534 DKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWG------------ 581
           +    + ++  L H G +  A A  +++  +N+  +     +L+ ++             
Sbjct: 727 NSQMLNALVRRLLHRGDISRAGAYLSKLDERNFSVEASTTSMLISIFSSDEYQHHAKSLP 786

Query: 582 ----------------KAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAY 625
                           KA  +  A+  +  ML  GL P+V T N++L    + G+ S+A 
Sbjct: 787 KKYRILNEANSSALIKKARRIDDAYSLFREMLMKGLTPDVVTYNTILHGLFQTGRFSEAK 846

Query: 626 HLLQGMLNLGLKPSLQTYTLLLS 648
            L   M+N   + ++ TY ++L+
Sbjct: 847 ELYLSMINSRTQMNIYTYNIILN 869



 Score = 94.7 bits (234), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 79/354 (22%), Positives = 151/354 (42%), Gaps = 28/354 (7%)

Query: 354 AGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNE 413
           +G K D +TY  ++  L ++       K+   +   G Q N++T+N +I +  +     +
Sbjct: 617 SGTKWDIYTYNIILNGLCKSNCVDEAIKMFQNLCSKGLQLNIITFNIMIGALLKGGRKED 676

Query: 414 ALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIIN 473
           A+D+F  +   G   + VTY  +++   + G L+    ++  M+  G +P++   + ++ 
Sbjct: 677 AMDLFAAIPANGLVQNVVTYRLVVENLIEEGSLEEFDSLFSAMEKNGTAPNSQMLNALVR 736

Query: 474 CLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMI-------------------------- 507
            L   G +  A     ++  +       T +++I                          
Sbjct: 737 RLLHRGDISRAGAYLSKLDERNFSVEASTTSMLISIFSSDEYQHHAKSLPKKYRILNEAN 796

Query: 508 --ALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKN 565
             AL  KAR    A  L+R+M   G  PD VTY+ ++  L   G   EA+ ++  M    
Sbjct: 797 SSALIKKARRIDDAYSLFREMLMKGLTPDVVTYNTILHGLFQTGRFSEAKELYLSMINSR 856

Query: 566 WVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAY 625
              +   Y ++++   K+  V +A++ ++++   GL+ N+ T N ++ A L+ G+  DA 
Sbjct: 857 TQMNIYTYNIILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFNIMIGALLKGGRKEDAM 916

Query: 626 HLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGFCHELMAVSGHPAHMFLLS 679
            L   +   GL P + TY L+     E  S  +       M  SG P    LL+
Sbjct: 917 DLFAAIPANGLVPDVVTYRLVAENLIEEGSLEEFDGLFLTMEKSGTPLDSRLLN 970



 Score = 94.0 bits (232), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 57/211 (27%), Positives = 105/211 (49%)

Query: 407  RANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTF 466
            +A  +++A  +F++M + G  PD VTY T++    + G    A ++Y  M  +    + +
Sbjct: 803  KARRIDDAYSLFREMLMKGLTPDVVTYNTILHGLFQTGRFSEAKELYLSMINSRTQMNIY 862

Query: 467  TYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDM 526
            TY++I+N L K+  +  A ++F  + ++G   N++T+NIMI    K    + A+ L+  +
Sbjct: 863  TYNIILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFNIMIGALLKGGRKEDAMDLFAAI 922

Query: 527  QNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNV 586
               G  PD VTY +V E L   G L+E + +F  M +     D  +   LV    + G++
Sbjct: 923  PANGLVPDVVTYRLVAENLIEEGSLEEFDGLFLTMEKSGTPLDSRLLNALVRRLLQRGDI 982

Query: 587  RKAWEWYEAMLQAGLRPNVPTCNSLLSAFLR 617
             +A  +   + +        T + L+S F R
Sbjct: 983  SRAGAYLSKLDEKNFSLEASTTSELISLFSR 1013



 Score = 80.9 bits (198), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 48/183 (26%), Positives = 95/183 (51%)

Query: 442 KAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLV 501
           KA  +D A  ++++M   GL+PD  TY+ I++ L + G    A +L+  M+N     N+ 
Sbjct: 803 KARRIDDAYSLFREMLMKGLTPDVVTYNTILHGLFQTGRFSEAKELYLSMINSRTQMNIY 862

Query: 502 TYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEM 561
           TYNI++    K+     A K+++ + + G + + +T++I++  L   G  ++A  +FA +
Sbjct: 863 TYNIILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFNIMIGALLKGGRKEDAMDLFAAI 922

Query: 562 RRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQL 621
                VPD   Y L+ +   + G++ +    +  M ++G   +    N+L+   L+ G +
Sbjct: 923 PANGLVPDVVTYRLVAENLIEEGSLEEFDGLFLTMEKSGTPLDSRLLNALVRRLLQRGDI 982

Query: 622 SDA 624
           S A
Sbjct: 983 SRA 985


>gi|255660776|gb|ACU25557.1| pentatricopeptide repeat-containing protein [Verbena perennis]
          Length = 418

 Score =  147 bits (372), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 84/279 (30%), Positives = 152/279 (54%)

Query: 370 LGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPD 429
           L + + F  +    ++ +  G   ++  +N L+HS+ +   +  A  VF  +      P 
Sbjct: 111 LMKLKYFKLVWGFYEESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPS 170

Query: 430 RVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFC 489
            V++ TL++ + K G LD    +   MQA+G+ PD +TYSV+IN L K   +  A++LF 
Sbjct: 171 VVSFNTLMNGYIKLGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFD 230

Query: 490 EMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCG 549
           EM++ G +PN VT+  +I    K      A+++Y+ M +    PD +TY+ ++  L   G
Sbjct: 231 EMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKLMLSQSLSPDLITYNTLIYGLCKKG 290

Query: 550 YLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCN 609
            L +A+ +  EM  K   PD+  Y  L+D   K G++  A+E+ + M++  +R +     
Sbjct: 291 DLKQAQDLIDEMSMKGLKPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYT 350

Query: 610 SLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
           +L+S   + G+  DA  +L+ ML++GLKP + TYT++++
Sbjct: 351 ALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIIN 389



 Score =  119 bits (298), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 79/316 (25%), Positives = 153/316 (48%), Gaps = 10/316 (3%)

Query: 335 KQLQDHTVALGFFNWL------RRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVR 388
           +++ +H + L +F  +        + G+    + +  ++    +  +      + D + +
Sbjct: 105 RKVLEHLMKLKYFKLVWGFYEESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITK 164

Query: 389 DGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDV 448
              +P+VV++N L++ Y +   L+E   +   MQ  G +PD  TY  LI+   K   +D 
Sbjct: 165 WSLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDD 224

Query: 449 AMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIA 508
           A +++ +M   GL P+  T++ +I+   K G +  A +++  M++Q   P+L+TYN +I 
Sbjct: 225 ANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKLMLSQSLSPDLITYNTLIY 284

Query: 509 LQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHC--GYLDEAEAVFAEMRRKNW 566
              K  + + A  L  +M   G +PDK+TY+ +++  G+C  G L+ A      M ++N 
Sbjct: 285 GLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLID--GNCKEGDLETAFEYRKRMIKENI 342

Query: 567 VPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYH 626
             D+  Y  L+    + G    A +    ML  GL+P + T   +++ F + G +     
Sbjct: 343 RLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSK 402

Query: 627 LLQGMLNLGLKPSLQT 642
           LL+ M   G  PS+ T
Sbjct: 403 LLKEMQRDGYMPSVVT 418



 Score = 53.5 bits (127), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 33/139 (23%), Positives = 69/139 (49%), Gaps = 1/139 (0%)

Query: 517 QSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLL 576
           + A++ YR  +   F     T   V+E L    Y       + E     +      + +L
Sbjct: 83  RDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFYEESLECGYPASLYFFNIL 142

Query: 577 VDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGL 636
           +  + K G +R A   ++A+ +  LRP+V + N+L++ ++++G L + + L   M   G+
Sbjct: 143 MHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQASGV 202

Query: 637 KPSLQTYTLLLS-CCTEAR 654
           +P + TY++L++  C E++
Sbjct: 203 QPDVYTYSVLINGLCKESK 221


>gi|224097576|ref|XP_002310993.1| predicted protein [Populus trichocarpa]
 gi|222850813|gb|EEE88360.1| predicted protein [Populus trichocarpa]
          Length = 877

 Score =  147 bits (372), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 85/317 (26%), Positives = 163/317 (51%)

Query: 354 AGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNE 413
           AG KH+  TY+ ++    + + +     + + +++DG +P+VV YN +I ++     ++ 
Sbjct: 477 AGIKHNMKTYSMLINGFLKLKDWTNAFTVFEDVIKDGLKPDVVLYNNIIKAFCGMGNMDR 536

Query: 414 ALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIIN 473
           A+ + K+MQ     P   T+  +I   A+AG +  A++++  M+ +G  P   T++ ++ 
Sbjct: 537 AIHMVKEMQKKRHRPTSRTFMPIIHGFARAGEMRRALEIFDMMRRSGCIPTVHTFNALVL 596

Query: 474 CLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEP 533
            L +   ++ A ++  EM   G  P+  TY  ++   A   +   A + +  ++N G E 
Sbjct: 597 GLVEKRQMEKAVEILDEMALAGVSPDEHTYTTIMNGYAALGDTGKAFEYFTKLRNEGLEL 656

Query: 534 DKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWY 593
           D  TY  +++     G +  A AV  EM  +N   +  VY +L+D W + G+V +A +  
Sbjct: 657 DVFTYEALLKACCKSGRMQSALAVTREMSAQNIPRNTFVYNILIDGWARRGDVWEAADLM 716

Query: 594 EAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEA 653
           + M Q G++P++ T  S ++A  + G +  A   +Q M  LG+KP+++TYT L+     A
Sbjct: 717 QQMKQEGVQPDIHTYTSFINACCKAGDMLRATKTIQEMEALGVKPNVKTYTTLIHGWACA 776

Query: 654 RSPYDMGFCHELMAVSG 670
             P     C E M ++G
Sbjct: 777 SLPEKALRCFEEMKLAG 793



 Score =  124 bits (310), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 75/273 (27%), Positives = 129/273 (47%), Gaps = 1/273 (0%)

Query: 362 TYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQM 421
           T+  ++    RA +     ++ D M R GC P V T+N L+        + +A+++  +M
Sbjct: 555 TFMPIIHGFARAGEMRRALEIFDMMRRSGCIPTVHTFNALVLGLVEKRQMEKAVEILDEM 614

Query: 422 QVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHL 481
            + G  PD  TY T+++ +A  G    A + + K++  GL  D FTY  ++    K+G +
Sbjct: 615 ALAGVSPDEHTYTTIMNGYAALGDTGKAFEYFTKLRNEGLELDVFTYEALLKACCKSGRM 674

Query: 482 QAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIV 541
           Q+A  +  EM  Q    N   YNI+I   A+  +   A  L + M+  G +PD  TY+  
Sbjct: 675 QSALAVTREMSAQNIPRNTFVYNILIDGWARRGDVWEAADLMQQMKQEGVQPDIHTYTSF 734

Query: 542 MEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGL 601
           +      G +  A     EM      P+   Y  L+  W  A    KA   +E M  AGL
Sbjct: 735 INACCKAGDMLRATKTIQEMEALGVKPNVKTYTTLIHGWACASLPEKALRCFEEMKLAGL 794

Query: 602 RPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNL 634
           +P+    + L+++ L    +++AY +  G+L++
Sbjct: 795 KPDKAVYHCLMTSLLSRATVAEAY-IYSGILSI 826



 Score =  115 bits (288), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 78/327 (23%), Positives = 142/327 (43%), Gaps = 41/327 (12%)

Query: 363 YTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQ 422
           +  MVG   R        +  + M   G  P+   Y  LIH+Y     + EAL   ++M+
Sbjct: 305 FGLMVGYYARRGDMHRARQTFESMRVRGIYPSSHVYTSLIHAYAVGRDMEEALSCVRKMK 364

Query: 423 VVGCEPDRVTYCTLIDIHAKAG---------------------FLDVAMDMY-------- 453
             G E   VTY  ++   AK G                      +D  +D+Y        
Sbjct: 365 EEGVEMSLVTYSIVVGGFAKIGNADQSCNMDRAESLVREMEEEGIDAPIDIYHTMMNGYT 424

Query: 454 ------------KKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLV 501
                       K+++  G +P   +Y  +IN   K G +  A ++   M + G   N+ 
Sbjct: 425 MIGNEEKCLIVFKRLKECGFAPSVISYGCLINMYTKMGKVSKALEVSKMMESAGIKHNMK 484

Query: 502 TYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEM 561
           TY+++I    K +++ +A  ++ D+   G +PD V Y+ +++     G +D A  +  EM
Sbjct: 485 TYSMLINGFLKLKDWTNAFTVFEDVIKDGLKPDVVLYNNIIKAFCGMGNMDRAIHMVKEM 544

Query: 562 RRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQL 621
           ++K   P    +  ++  + +AG +R+A E ++ M ++G  P V T N+L+   +   Q+
Sbjct: 545 QKKRHRPTSRTFMPIIHGFARAGEMRRALEIFDMMRRSGCIPTVHTFNALVLGLVEKRQM 604

Query: 622 SDAYHLLQGMLNLGLKPSLQTYTLLLS 648
             A  +L  M   G+ P   TYT +++
Sbjct: 605 EKAVEILDEMALAGVSPDEHTYTTIMN 631



 Score = 99.4 bits (246), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 64/235 (27%), Positives = 114/235 (48%), Gaps = 1/235 (0%)

Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLI 402
           AL  F+ +RR +G     HT+  +V  L   RQ     ++LD+M   G  P+  TY  ++
Sbjct: 572 ALEIFDMMRR-SGCIPTVHTFNALVLGLVEKRQMEKAVEILDEMALAGVSPDEHTYTTIM 630

Query: 403 HSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLS 462
           + Y       +A + F +++  G E D  TY  L+    K+G +  A+ + ++M A  + 
Sbjct: 631 NGYAALGDTGKAFEYFTKLRNEGLELDVFTYEALLKACCKSGRMQSALAVTREMSAQNIP 690

Query: 463 PDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKL 522
            +TF Y+++I+   + G +  A  L  +M  +G  P++ TY   I    KA +   A K 
Sbjct: 691 RNTFVYNILIDGWARRGDVWEAADLMQQMKQEGVQPDIHTYTSFINACCKAGDMLRATKT 750

Query: 523 YRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLV 577
            ++M+  G +P+  TY+ ++         ++A   F EM+     PD+ VY  L+
Sbjct: 751 IQEMEALGVKPNVKTYTTLIHGWACASLPEKALRCFEEMKLAGLKPDKAVYHCLM 805



 Score = 97.4 bits (241), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 60/192 (31%), Positives = 95/192 (49%)

Query: 354 AGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNE 413
           AG   DEHTYTT++         G   +   ++  +G + +V TY  L+ +  ++  +  
Sbjct: 617 AGVSPDEHTYTTIMNGYAALGDTGKAFEYFTKLRNEGLELDVFTYEALLKACCKSGRMQS 676

Query: 414 ALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIIN 473
           AL V ++M       +   Y  LID  A+ G +  A D+ ++M+  G+ PD  TY+  IN
Sbjct: 677 ALAVTREMSAQNIPRNTFVYNILIDGWARRGDVWEAADLMQQMKQEGVQPDIHTYTSFIN 736

Query: 474 CLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEP 533
              KAG +  A +   EM   G  PN+ TY  +I   A A   + AL+ + +M+ AG +P
Sbjct: 737 ACCKAGDMLRATKTIQEMEALGVKPNVKTYTTLIHGWACASLPEKALRCFEEMKLAGLKP 796

Query: 534 DKVTYSIVMEVL 545
           DK  Y  +M  L
Sbjct: 797 DKAVYHCLMTSL 808


>gi|384249299|gb|EIE22781.1| hypothetical protein COCSUDRAFT_47692 [Coccomyxa subellipsoidea
           C-169]
          Length = 1226

 Score =  147 bits (372), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 100/313 (31%), Positives = 150/313 (47%), Gaps = 4/313 (1%)

Query: 335 KQLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPN 394
           ++  DH +ALG      R A    D +TYT  + I   A+Q     +L   M R G Q N
Sbjct: 115 QEFFDHVLALGDSTEAARLA----DVYTYTAAISICVSAQQLERALELSADMQRRGVQRN 170

Query: 395 VVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYK 454
           V T++ L++   +   L  ALDV++ MQ  G  P+ VTY TLID++ K G  + A+ + +
Sbjct: 171 VHTHSALMNVCIKCGQLKLALDVWEDMQRDGIVPNVVTYNTLIDVYGKLGQWEQALQVLR 230

Query: 455 KMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKAR 514
           +M+  G+ P T TY+ ++     +G  Q A QL+ EM   G   N  +YN +I+  +KA 
Sbjct: 231 RMKFQGIEPVTRTYNTLMIACNTSGQWQTALQLYEEMRAAGHALNTTSYNALISAHSKAG 290

Query: 515 NYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYG 574
           +    L  YR M   G E   +TYS ++      G    A   F E  + N  P+   + 
Sbjct: 291 DLPQVLDTYRQMVQQGCERSVITYSSLISACEKSGEWQLALRFFDECLKDNCRPNVITFN 350

Query: 575 LLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNL 634
            L+    +     KA E +E M Q G  P+V T  +L+SA+ R G+   A    Q M   
Sbjct: 351 SLITACAQGAQWEKARELFELMQQQGCTPDVVTYTALISAYERGGKWQLALQAFQAMQAK 410

Query: 635 GLKPSLQTYTLLL 647
           G KP    Y  ++
Sbjct: 411 GCKPDSIVYNAII 423



 Score =  135 bits (341), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 73/265 (27%), Positives = 138/265 (52%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           G + + HT++ ++ +  +  Q      + + M RDG  PNVVTYN LI  YG+     +A
Sbjct: 166 GVQRNVHTHSALMNVCIKCGQLKLALDVWEDMQRDGIVPNVVTYNTLIDVYGKLGQWEQA 225

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
           L V ++M+  G EP   TY TL+     +G    A+ +Y++M+AAG + +T +Y+ +I+ 
Sbjct: 226 LQVLRRMKFQGIEPVTRTYNTLMIACNTSGQWQTALQLYEEMRAAGHALNTTSYNALISA 285

Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPD 534
             KAG L      + +MV QGC  +++TY+ +I+   K+  +Q AL+ + +       P+
Sbjct: 286 HSKAGDLPQVLDTYRQMVQQGCERSVITYSSLISACEKSGEWQLALRFFDECLKDNCRPN 345

Query: 535 KVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYE 594
            +T++ ++         ++A  +F  M+++   PD   Y  L+  + + G  + A + ++
Sbjct: 346 VITFNSLITACAQGAQWEKARELFELMQQQGCTPDVVTYTALISAYERGGKWQLALQAFQ 405

Query: 595 AMLQAGLRPNVPTCNSLLSAFLRVG 619
           AM   G +P+    N+++      G
Sbjct: 406 AMQAKGCKPDSIVYNAIIDTLWDTG 430



 Score =  129 bits (325), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 112/450 (24%), Positives = 192/450 (42%), Gaps = 39/450 (8%)

Query: 367 VGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGC 426
            G+  RA++F      L          +V TY   I     A  L  AL++   MQ  G 
Sbjct: 108 TGLAHRAQEFFDHVLALGDSTEAARLADVYTYTAAISICVSAQQLERALELSADMQRRGV 167

Query: 427 EPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQ 486
           + +  T+  L+++  K G L +A+D+++ MQ  G+ P+  TY+ +I+  GK G  + A Q
Sbjct: 168 QRNVHTHSALMNVCIKCGQLKLALDVWEDMQRDGIVPNVVTYNTLIDVYGKLGQWEQALQ 227

Query: 487 LFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLG 546
           +   M  QG  P   TYN ++     +  +Q+AL+LY +M+ AG   +  +Y+ ++    
Sbjct: 228 VLRRMKFQGIEPVTRTYNTLMIACNTSGQWQTALQLYEEMRAAGHALNTTSYNALISAHS 287

Query: 547 HCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVP 606
             G L +    + +M ++        Y  L+    K+G  + A  +++  L+   RPNV 
Sbjct: 288 KAGDLPQVLDTYRQMVQQGCERSVITYSSLISACEKSGEWQLALRFFDECLKDNCRPNVI 347

Query: 607 TCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGFCHELM 666
           T NSL++A  +  Q   A  L + M   G  P + TYT L+S        Y+ G   +L 
Sbjct: 348 TFNSLITACAQGAQWEKARELFELMQQQGCTPDVVTYTALISA-------YERGGKWQLA 400

Query: 667 AVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRESKRGLVDAVVDFLHKSGLK 726
             +                             + M ++  +    + +A++D L  +G  
Sbjct: 401 LQA----------------------------FQAMQAKGCKPDSIVYNAIIDTLWDTGCA 432

Query: 727 --EEAGSVWEVAAQKNVYPDAVKEKGMSYWLINLHVMSDGTAVIALSRTLAWFRKQMLIS 784
             +   +V    A               Y  + LH ++ G A ++L   L+  R+++   
Sbjct: 433 WPQRQAAVLHRRASAGGLLRRAAHAAPGYLELCLHTLTAGVAALSLYTWLSDLRQKVATE 492

Query: 785 GVG--PSRIDIVTGWGRRSRVTGTSLVRQA 812
           G    P+RI IVTG GR     G S  R+A
Sbjct: 493 GADALPTRIAIVTGKGRGKDDDGASAAREA 522


>gi|255660852|gb|ACU25595.1| pentatricopeptide repeat-containing protein [Stachytarpheta
           cayennensis]
          Length = 418

 Score =  147 bits (372), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 87/279 (31%), Positives = 144/279 (51%)

Query: 370 LGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPD 429
           L   R F  +     +++  G   ++  +N L+  + +   +  A  VF  +   G  P 
Sbjct: 111 LMEFRYFKLVWDFYKEVLECGYPASLYFFNILMQRFCKEGEMRLAQSVFDAITKWGLRPS 170

Query: 430 RVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFC 489
            V++ TLI+ + K G LD    +   M A+G  PD +TYS++IN L K G L  A++LF 
Sbjct: 171 VVSFNTLINGYIKLGDLDEGFRLKSAMHASGAQPDVYTYSILINGLCKEGKLDEANELFN 230

Query: 490 EMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCG 549
           EM++ G +PN VT+  +I    K      A+++Y+ M + G  PD +TY+ ++  L   G
Sbjct: 231 EMLDNGLVPNGVTFTTLIHGHCKNEKVDLAMEIYKQMLSQGLSPDLITYNTLIYGLCKKG 290

Query: 550 YLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCN 609
            L +   +  EM      PD+  Y  L+D   K G++  A E    M+Q  +R +     
Sbjct: 291 ELKQVHDLIDEMIMNGLKPDKISYTTLIDGSCKEGDLEIALELRNKMIQESIRLDDVAYT 350

Query: 610 SLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
           +L+S   R G+ SDA  +L+ ML++GLKP   TYT++++
Sbjct: 351 ALISCLCREGRASDAEKMLREMLSVGLKPDNGTYTMIIN 389



 Score =  122 bits (305), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 74/227 (32%), Positives = 116/227 (51%)

Query: 381 KLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIH 440
           +L   M   G QP+V TY+ LI+   +   L+EA ++F +M   G  P+ VT+ TLI  H
Sbjct: 192 RLKSAMHASGAQPDVYTYSILINGLCKEGKLDEANELFNEMLDNGLVPNGVTFTTLIHGH 251

Query: 441 AKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNL 500
            K   +D+AM++YK+M + GLSPD  TY+ +I  L K G L+  H L  EM+  G  P+ 
Sbjct: 252 CKNEKVDLAMEIYKQMLSQGLSPDLITYNTLIYGLCKKGELKQVHDLIDEMIMNGLKPDK 311

Query: 501 VTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAE 560
           ++Y  +I    K  + + AL+L   M       D V Y+ ++  L   G   +AE +  E
Sbjct: 312 ISYTTLIDGSCKEGDLEIALELRNKMIQESIRLDDVAYTALISCLCREGRASDAEKMLRE 371

Query: 561 MRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPT 607
           M      PD   Y ++++ + K  + + A +    M + G  P V T
Sbjct: 372 MLSVGLKPDNGTYTMIINEFCKKRDSKTASKLLREMQRDGPLPGVVT 418



 Score =  106 bits (264), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 62/215 (28%), Positives = 111/215 (51%)

Query: 354 AGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNE 413
           +G + D +TY+ ++  L +  +    N+L ++M+ +G  PN VT+  LIH + +   ++ 
Sbjct: 200 SGAQPDVYTYSILINGLCKEGKLDEANELFNEMLDNGLVPNGVTFTTLIHGHCKNEKVDL 259

Query: 414 ALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIIN 473
           A++++KQM   G  PD +TY TLI    K G L    D+  +M   GL PD  +Y+ +I+
Sbjct: 260 AMEIYKQMLSQGLSPDLITYNTLIYGLCKKGELKQVHDLIDEMIMNGLKPDKISYTTLID 319

Query: 474 CLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEP 533
              K G L+ A +L  +M+ +    + V Y  +I+   +      A K+ R+M + G +P
Sbjct: 320 GSCKEGDLEIALELRNKMIQESIRLDDVAYTALISCLCREGRASDAEKMLREMLSVGLKP 379

Query: 534 DKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVP 568
           D  TY++++           A  +  EM+R   +P
Sbjct: 380 DNGTYTMIINEFCKKRDSKTASKLLREMQRDGPLP 414



 Score = 91.3 bits (225), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 66/279 (23%), Positives = 123/279 (44%), Gaps = 5/279 (1%)

Query: 397 TYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKM 456
           T  +++       Y     D +K++   G       +  L+    K G + +A  ++  +
Sbjct: 103 TCRKVLEHLMEFRYFKLVWDFYKEVLECGYPASLYFFNILMQRFCKEGEMRLAQSVFDAI 162

Query: 457 QAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNY 516
              GL P   +++ +IN   K G L    +L   M   G  P++ TY+I+I    K    
Sbjct: 163 TKWGLRPSVVSFNTLINGYIKLGDLDEGFRLKSAMHASGAQPDVYTYSILINGLCKEGKL 222

Query: 517 QSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCG--YLDEAEAVFAEMRRKNWVPDEPVYG 574
             A +L+ +M + G  P+ VT++ ++   GHC    +D A  ++ +M  +   PD   Y 
Sbjct: 223 DEANELFNEMLDNGLVPNGVTFTTLIH--GHCKNEKVDLAMEIYKQMLSQGLSPDLITYN 280

Query: 575 LLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNL 634
            L+    K G +++  +  + M+  GL+P+  +  +L+    + G L  A  L   M+  
Sbjct: 281 TLIYGLCKKGELKQVHDLIDEMIMNGLKPDKISYTTLIDGSCKEGDLEIALELRNKMIQE 340

Query: 635 GLKPSLQTYTLLLSC-CTEARSPYDMGFCHELMAVSGHP 672
            ++     YT L+SC C E R+        E+++V   P
Sbjct: 341 SIRLDDVAYTALISCLCREGRASDAEKMLREMLSVGLKP 379



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 47/176 (26%), Positives = 81/176 (46%), Gaps = 35/176 (19%)

Query: 362 TYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQM 421
           T+TT++    +  +     ++  QM+  G  P+++TYN LI+   +   L +  D+  +M
Sbjct: 243 TFTTLIHGHCKNEKVDLAMEIYKQMLSQGLSPDLITYNTLIYGLCKKGELKQVHDLIDEM 302

Query: 422 QVVGCEPDRVTYCTLIDIHAKAGFLDVAMD------------------------------ 451
            + G +PD+++Y TLID   K G L++A++                              
Sbjct: 303 IMNGLKPDKISYTTLIDGSCKEGDLEIALELRNKMIQESIRLDDVAYTALISCLCREGRA 362

Query: 452 -----MYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVT 502
                M ++M + GL PD  TY++IIN   K    + A +L  EM   G +P +VT
Sbjct: 363 SDAEKMLREMLSVGLKPDNGTYTMIINEFCKKRDSKTASKLLREMQRDGPLPGVVT 418



 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 67/309 (21%), Positives = 131/309 (42%), Gaps = 26/309 (8%)

Query: 357 KHDEHTYTTMVGILGRARQFGAINKLLDQMV-RDGCQPNVVTYNRLIHSYGRANYLNEAL 415
           +H  H+Y TM+ +L   +       L+  +V R G                     + A 
Sbjct: 10  RHTLHSYCTMIHLLCTHQMLIEAKSLIQVVVSRKG--------------------KDSAS 49

Query: 416 DVFKQ-MQVVGCE-PDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIIN 473
           DVF+  ++  G +  D   +  L+  + ++GF+  A+  ++  +   +     T   ++ 
Sbjct: 50  DVFEAILETKGTQRSDFYVFSGLMIAYLESGFVRDAVQCFRLTKQHKIRVPFDTCRKVLE 109

Query: 474 CLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEP 533
            L +  + +     + E++  G   +L  +NI++    K    + A  ++  +   G  P
Sbjct: 110 HLMEFRYFKLVWDFYKEVLECGYPASLYFFNILMQRFCKEGEMRLAQSVFDAITKWGLRP 169

Query: 534 DKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWY 593
             V+++ ++      G LDE   + + M      PD   Y +L++   K G + +A E +
Sbjct: 170 SVVSFNTLINGYIKLGDLDEGFRLKSAMHASGAQPDVYTYSILINGLCKEGKLDEANELF 229

Query: 594 EAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTY-TLLLSCCT- 651
             ML  GL PN  T  +L+    +  ++  A  + + ML+ GL P L TY TL+   C  
Sbjct: 230 NEMLDNGLVPNGVTFTTLIHGHCKNEKVDLAMEIYKQMLSQGLSPDLITYNTLIYGLCKK 289

Query: 652 -EARSPYDM 659
            E +  +D+
Sbjct: 290 GELKQVHDL 298


>gi|225427482|ref|XP_002263209.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 592

 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 88/285 (30%), Positives = 150/285 (52%)

Query: 363 YTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQ 422
           +TT+V  L +       + ++D M++ G +P+VVTY  L+  +   + ++EA  VF  M 
Sbjct: 287 FTTLVDALCKEGMVTIAHDVVDVMIQRGVEPDVVTYTALMDGHCLRSEMDEADKVFDTMV 346

Query: 423 VVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQ 482
             GC P+ ++Y TLI+ + K   +D AM ++++M    L P+  TY+ +I+ L   G L+
Sbjct: 347 RKGCAPNVISYSTLINGYCKIQRIDKAMYLFEEMCQRELVPNIVTYNTLIHGLCHVGRLR 406

Query: 483 AAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVM 542
            A  LF EMV  G IP+LVTY I++    K R+   A+ + + ++ +   PD  +Y+IV+
Sbjct: 407 DAIALFHEMVASGQIPDLVTYRILLDYLCKTRHLDQAMAMLKAIEGSNLAPDIQSYNIVI 466

Query: 543 EVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLR 602
           + +   G L+ A  +F+ +  K   PD   Y ++++     G + +A + +  M   G  
Sbjct: 467 DGMCRVGELEAAGDLFSSLSSKGLHPDVWTYTIMINGLCLQGLLAEATKLFREMNTDGCS 526

Query: 603 PNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
           P+  T N +   FLR  +   A  LLQ ML  G      T TL++
Sbjct: 527 PDDCTYNLITRGFLRNNETLSAIQLLQEMLGRGFSADASTITLIV 571



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 82/287 (28%), Positives = 145/287 (50%)

Query: 362 TYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQM 421
           TY T++  L + RQ      +  +M+  G  PNV TYN +IH   + +       +  +M
Sbjct: 216 TYNTIIDCLFKDRQVNEALNIFSEMIAKGISPNVSTYNSIIHGLCKFSEWKHVATLMNEM 275

Query: 422 QVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHL 481
                 P+ V + TL+D   K G + +A D+   M   G+ PD  TY+ +++       +
Sbjct: 276 VDSKIMPNVVIFTTLVDALCKEGMVTIAHDVVDVMIQRGVEPDVVTYTALMDGHCLRSEM 335

Query: 482 QAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIV 541
             A ++F  MV +GC PN+++Y+ +I    K +    A+ L+ +M      P+ VTY+ +
Sbjct: 336 DEADKVFDTMVRKGCAPNVISYSTLINGYCKIQRIDKAMYLFEEMCQRELVPNIVTYNTL 395

Query: 542 MEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGL 601
           +  L H G L +A A+F EM     +PD   Y +L+D   K  ++ +A    +A+  + L
Sbjct: 396 IHGLCHVGRLRDAIALFHEMVASGQIPDLVTYRILLDYLCKTRHLDQAMAMLKAIEGSNL 455

Query: 602 RPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
            P++ + N ++    RVG+L  A  L   + + GL P + TYT++++
Sbjct: 456 APDIQSYNIVIDGMCRVGELEAAGDLFSSLSSKGLHPDVWTYTIMIN 502



 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 88/304 (28%), Positives = 149/304 (49%), Gaps = 1/304 (0%)

Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLI 402
           AL  F+ +  + G   +  TY +++  L +  ++  +  L+++MV     PNVV +  L+
Sbjct: 233 ALNIFSEMIAK-GISPNVSTYNSIIHGLCKFSEWKHVATLMNEMVDSKIMPNVVIFTTLV 291

Query: 403 HSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLS 462
            +  +   +  A DV   M   G EPD VTY  L+D H     +D A  ++  M   G +
Sbjct: 292 DALCKEGMVTIAHDVVDVMIQRGVEPDVVTYTALMDGHCLRSEMDEADKVFDTMVRKGCA 351

Query: 463 PDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKL 522
           P+  +YS +IN   K   +  A  LF EM  +  +PN+VTYN +I         + A+ L
Sbjct: 352 PNVISYSTLINGYCKIQRIDKAMYLFEEMCQRELVPNIVTYNTLIHGLCHVGRLRDAIAL 411

Query: 523 YRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGK 582
           + +M  +G  PD VTY I+++ L    +LD+A A+   +   N  PD   Y +++D   +
Sbjct: 412 FHEMVASGQIPDLVTYRILLDYLCKTRHLDQAMAMLKAIEGSNLAPDIQSYNIVIDGMCR 471

Query: 583 AGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQT 642
            G +  A + + ++   GL P+V T   +++     G L++A  L + M   G  P   T
Sbjct: 472 VGELEAAGDLFSSLSSKGLHPDVWTYTIMINGLCLQGLLAEATKLFREMNTDGCSPDDCT 531

Query: 643 YTLL 646
           Y L+
Sbjct: 532 YNLI 535



 Score =  137 bits (346), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 95/310 (30%), Positives = 141/310 (45%), Gaps = 39/310 (12%)

Query: 382 LLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHA 441
           +L ++ + G QP+  T+  LI        + EAL +F +M   G +P+ VTY TLI    
Sbjct: 131 VLAKIFKLGHQPDTATFTTLIRGLCVEGKIGEALHLFDKMVGEGFQPNGVTYGTLIHGLC 190

Query: 442 KAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLV 501
           K G    A+ + + M      P+  TY+ II+CL K   +  A  +F EM+ +G  PN+ 
Sbjct: 191 KVGNSRAAIRLLRSMVQKNCEPNVITYNTIIDCLFKDRQVNEALNIFSEMIAKGISPNVS 250

Query: 502 TYNIMIALQAKARNYQSALKLYRDMQNA-------------------------------- 529
           TYN +I    K   ++    L  +M ++                                
Sbjct: 251 TYNSIIHGLCKFSEWKHVATLMNEMVDSKIMPNVVIFTTLVDALCKEGMVTIAHDVVDVM 310

Query: 530 ---GFEPDKVTYSIVMEVLGHC--GYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAG 584
              G EPD VTY+ +M+  GHC    +DEA+ VF  M RK   P+   Y  L++ + K  
Sbjct: 311 IQRGVEPDVVTYTALMD--GHCLRSEMDEADKVFDTMVRKGCAPNVISYSTLINGYCKIQ 368

Query: 585 NVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYT 644
            + KA   +E M Q  L PN+ T N+L+     VG+L DA  L   M+  G  P L TY 
Sbjct: 369 RIDKAMYLFEEMCQRELVPNIVTYNTLIHGLCHVGRLRDAIALFHEMVASGQIPDLVTYR 428

Query: 645 LLLSCCTEAR 654
           +LL    + R
Sbjct: 429 ILLDYLCKTR 438



 Score =  121 bits (304), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 96/379 (25%), Positives = 170/379 (44%), Gaps = 8/379 (2%)

Query: 370 LGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPD 429
           +   + +  +  L  QM   G   +V T   +I+S+   N ++    V  ++  +G +PD
Sbjct: 84  IANMKHYSTVLSLSKQMDSLGIPSDVYTLAIVINSFCHLNRVDFGFSVLAKIFKLGHQPD 143

Query: 430 RVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFC 489
             T+ TLI      G +  A+ ++ KM   G  P+  TY  +I+ L K G+ +AA +L  
Sbjct: 144 TATFTTLIRGLCVEGKIGEALHLFDKMVGEGFQPNGVTYGTLIHGLCKVGNSRAAIRLLR 203

Query: 490 EMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCG 549
            MV + C PN++TYN +I    K R    AL ++ +M   G  P+  TY+ ++  L    
Sbjct: 204 SMVQKNCEPNVITYNTIIDCLFKDRQVNEALNIFSEMIAKGISPNVSTYNSIIHGLCKFS 263

Query: 550 YLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCN 609
                  +  EM     +P+  ++  LVD   K G V  A +  + M+Q G+ P+V T  
Sbjct: 264 EWKHVATLMNEMVDSKIMPNVVIFTTLVDALCKEGMVTIAHDVVDVMIQRGVEPDVVTYT 323

Query: 610 SLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTY-TLLLSCCTEARSPYDMGFCHELMAV 668
           +L+       ++ +A  +   M+  G  P++ +Y TL+   C   R    M    E+   
Sbjct: 324 ALMDGHCLRSEMDEADKVFDTMVRKGCAPNVISYSTLINGYCKIQRIDKAMYLFEEMCQR 383

Query: 669 SGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHS---EDRESKRGLVDAVVDFLHKSGL 725
              P  +   ++         +RD +  F EM+ S    D  + R L    +D+L K+  
Sbjct: 384 ELVPNIVTYNTLIHGLCHVGRLRDAIALFHEMVASGQIPDLVTYRIL----LDYLCKTRH 439

Query: 726 KEEAGSVWEVAAQKNVYPD 744
            ++A ++ +     N+ PD
Sbjct: 440 LDQAMAMLKAIEGSNLAPD 458



 Score =  111 bits (278), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 69/255 (27%), Positives = 124/255 (48%)

Query: 393 PNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDM 452
           P+VV + +++ S     + +  L + KQM  +G   D  T   +I+       +D    +
Sbjct: 72  PSVVDFAKILTSIANMKHYSTVLSLSKQMDSLGIPSDVYTLAIVINSFCHLNRVDFGFSV 131

Query: 453 YKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAK 512
             K+   G  PDT T++ +I  L   G +  A  LF +MV +G  PN VTY  +I    K
Sbjct: 132 LAKIFKLGHQPDTATFTTLIRGLCVEGKIGEALHLFDKMVGEGFQPNGVTYGTLIHGLCK 191

Query: 513 ARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPV 572
             N ++A++L R M     EP+ +TY+ +++ L     ++EA  +F+EM  K   P+   
Sbjct: 192 VGNSRAAIRLLRSMVQKNCEPNVITYNTIIDCLFKDRQVNEALNIFSEMIAKGISPNVST 251

Query: 573 YGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGML 632
           Y  ++    K    +        M+ + + PNV    +L+ A  + G ++ A+ ++  M+
Sbjct: 252 YNSIIHGLCKFSEWKHVATLMNEMVDSKIMPNVVIFTTLVDALCKEGMVTIAHDVVDVMI 311

Query: 633 NLGLKPSLQTYTLLL 647
             G++P + TYT L+
Sbjct: 312 QRGVEPDVVTYTALM 326



 Score =  100 bits (248), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 62/200 (31%), Positives = 105/200 (52%), Gaps = 2/200 (1%)

Query: 362 TYTTMV-GILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQ 420
           TY T++ G+    R   AI  L  +MV  G  P++VTY  L+    +  +L++A+ + K 
Sbjct: 391 TYNTLIHGLCHVGRLRDAI-ALFHEMVASGQIPDLVTYRILLDYLCKTRHLDQAMAMLKA 449

Query: 421 MQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGH 480
           ++     PD  +Y  +ID   + G L+ A D++  + + GL PD +TY+++IN L   G 
Sbjct: 450 IEGSNLAPDIQSYNIVIDGMCRVGELEAAGDLFSSLSSKGLHPDVWTYTIMINGLCLQGL 509

Query: 481 LQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSI 540
           L  A +LF EM   GC P+  TYN++     +     SA++L ++M   GF  D  T ++
Sbjct: 510 LAEATKLFREMNTDGCSPDDCTYNLITRGFLRNNETLSAIQLLQEMLGRGFSADASTITL 569

Query: 541 VMEVLGHCGYLDEAEAVFAE 560
           ++E+L   G     + +  E
Sbjct: 570 IVEMLSDDGLDQSVKQILHE 589



 Score = 75.5 bits (184), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 57/249 (22%), Positives = 105/249 (42%)

Query: 498 PNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAV 557
           P++V +  ++   A  ++Y + L L + M + G   D  T +IV+    H   +D   +V
Sbjct: 72  PSVVDFAKILTSIANMKHYSTVLSLSKQMDSLGIPSDVYTLAIVINSFCHLNRVDFGFSV 131

Query: 558 FAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLR 617
            A++ +    PD   +  L+      G + +A   ++ M+  G +PN  T  +L+    +
Sbjct: 132 LAKIFKLGHQPDTATFTTLIRGLCVEGKIGEALHLFDKMVGEGFQPNGVTYGTLIHGLCK 191

Query: 618 VGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGFCHELMAVSGHPAHMFL 677
           VG    A  LL+ M+    +P++ TY  ++ C  + R   +       M   G   ++  
Sbjct: 192 VGNSRAAIRLLRSMVQKNCEPNVITYNTIIDCLFKDRQVNEALNIFSEMIAKGISPNVST 251

Query: 678 LSMPSPGPDGQNVRDHVGSFLEMMHSEDRESKRGLVDAVVDFLHKSGLKEEAGSVWEVAA 737
            +    G    +   HV + +  M          +   +VD L K G+   A  V +V  
Sbjct: 252 YNSIIHGLCKFSEWKHVATLMNEMVDSKIMPNVVIFTTLVDALCKEGMVTIAHDVVDVMI 311

Query: 738 QKNVYPDAV 746
           Q+ V PD V
Sbjct: 312 QRGVEPDVV 320



 Score = 41.6 bits (96), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 25/91 (27%), Positives = 39/91 (42%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           G   D  TYT M+  L          KL  +M  DGC P+  TYN +   + R N    A
Sbjct: 489 GLHPDVWTYTIMINGLCLQGLLAEATKLFREMNTDGCSPDDCTYNLITRGFLRNNETLSA 548

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGF 445
           + + ++M   G   D  T   ++++ +  G 
Sbjct: 549 IQLLQEMLGRGFSADASTITLIVEMLSDDGL 579


>gi|7413543|emb|CAB86023.1| putative protein [Arabidopsis thaliana]
          Length = 880

 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 85/319 (26%), Positives = 163/319 (51%), Gaps = 3/319 (0%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           ++ G KH+  TY+ M+    + + +     + + MV++G +P+V+ YN +I ++     +
Sbjct: 511 KEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGMKPDVILYNNIISAFCGMGNM 570

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
           + A+   K+MQ +   P   T+  +I  +AK+G +  +++++  M+  G  P   T++ +
Sbjct: 571 DRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGL 630

Query: 472 INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF 531
           IN L +    + A ++  EM   G   N  TY  ++   A   +   A + +  +QN G 
Sbjct: 631 INGLVEK---RQAVEILDEMTLAGVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGL 687

Query: 532 EPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWE 591
           + D  TY  +++     G +  A AV  EM  +N   +  VY +L+D W + G+V +A +
Sbjct: 688 DVDIFTYEALLKACCKSGRMQSALAVTKEMSARNIPRNSFVYNILIDGWARRGDVWEAAD 747

Query: 592 WYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCT 651
             + M + G++P++ T  S +SA  + G ++ A   ++ M  LG+KP+++TYT L+    
Sbjct: 748 LIQQMKKEGVKPDIHTYTSFISACSKAGDMNRATQTIEEMEALGVKPNIKTYTTLIKGWA 807

Query: 652 EARSPYDMGFCHELMAVSG 670
            A  P     C+E M   G
Sbjct: 808 RASLPEKALSCYEEMKAMG 826



 Score =  119 bits (297), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 69/259 (26%), Positives = 127/259 (49%), Gaps = 4/259 (1%)

Query: 392 QPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMD 451
           +P+   +  ++  YGR   ++ A + F++M+  G  P    Y +LI  +A    +D A+ 
Sbjct: 306 KPSRTEFGLMVKFYGRRGDMHRARETFERMRARGITPTSRIYTSLIHAYAVGRDMDEALS 365

Query: 452 MYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQA 511
             +KM+  G+     TYSVI+    KAGH +AA   F E        N   Y  +I    
Sbjct: 366 CVRKMKEEGIEMSLVTYSVIVGGFSKAGHAEAADYWFDEAKRIHKTLNASIYGKIIYAHC 425

Query: 512 KARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEA--VFAEMRRKNWVPD 569
           +  N + A  L R+M+  G +     Y  +M+  G+    DE +   VF  ++   + P 
Sbjct: 426 QTCNMERAEALVREMEEEGIDAPIAIYHTMMD--GYTMVADEKKGLVVFKRLKECGFTPT 483

Query: 570 EPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQ 629
              YG L++L+ K G + KA E    M + G++ N+ T + +++ F+++   ++A+ + +
Sbjct: 484 VVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFE 543

Query: 630 GMLNLGLKPSLQTYTLLLS 648
            M+  G+KP +  Y  ++S
Sbjct: 544 DMVKEGMKPDVILYNNIIS 562



 Score =  112 bits (279), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 69/296 (23%), Positives = 140/296 (47%), Gaps = 3/296 (1%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           ++ G +    TY+ +VG   +A    A +   D+  R     N   Y ++I+++ +   +
Sbjct: 371 KEEGIEMSLVTYSVIVGGFSKAGHAEAADYWFDEAKRIHKTLNASIYGKIIYAHCQTCNM 430

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
             A  + ++M+  G +     Y T++D +         + ++K+++  G +P   TY  +
Sbjct: 431 ERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKECGFTPTVVTYGCL 490

Query: 472 INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF 531
           IN   K G +  A ++   M  +G   NL TY++MI    K +++ +A  ++ DM   G 
Sbjct: 491 INLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGM 550

Query: 532 EPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWE 591
           +PD + Y+ ++      G +D A     EM++    P    +  ++  + K+G++R++ E
Sbjct: 551 KPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSLE 610

Query: 592 WYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
            ++ M + G  P V T N L++  +   Q   A  +L  M   G+  +  TYT ++
Sbjct: 611 VFDMMRRCGCVPTVHTFNGLINGLVEKRQ---AVEILDEMTLAGVSANEHTYTKIM 663



 Score =  112 bits (279), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 76/288 (26%), Positives = 132/288 (45%), Gaps = 8/288 (2%)

Query: 350 LRRQAGFKHDEHTYTTMVGILGRARQFGAINK---LLDQMVRDGCQPNVVTYNRLIHSYG 406
           ++     +H   T T M  I G A+  G + +   + D M R GC P V T+N LI+   
Sbjct: 577 VKEMQKLRHRPTTRTFMPIIHGYAKS-GDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLV 635

Query: 407 RANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTF 466
                 +A+++  +M + G   +  TY  ++  +A  G    A + + ++Q  GL  D F
Sbjct: 636 EKR---QAVEILDEMTLAGVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIF 692

Query: 467 TYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDM 526
           TY  ++    K+G +Q+A  +  EM  +    N   YNI+I   A+  +   A  L + M
Sbjct: 693 TYEALLKACCKSGRMQSALAVTKEMSARNIPRNSFVYNILIDGWARRGDVWEAADLIQQM 752

Query: 527 QNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNV 586
           +  G +PD  TY+  +      G ++ A     EM      P+   Y  L+  W +A   
Sbjct: 753 KKEGVKPDIHTYTSFISACSKAGDMNRATQTIEEMEALGVKPNIKTYTTLIKGWARASLP 812

Query: 587 RKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNL 634
            KA   YE M   G++P+    + LL++ L    +++AY +  G++ +
Sbjct: 813 EKALSCYEEMKAMGIKPDKAVYHCLLTSLLSRASIAEAY-IYSGVMTI 859



 Score =  100 bits (249), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 64/285 (22%), Positives = 132/285 (46%)

Query: 363 YTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQ 422
           +  MV   GR        +  ++M   G  P    Y  LIH+Y     ++EAL   ++M+
Sbjct: 312 FGLMVKFYGRRGDMHRARETFERMRARGITPTSRIYTSLIHAYAVGRDMDEALSCVRKMK 371

Query: 423 VVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQ 482
             G E   VTY  ++   +KAG  + A   + + +    + +   Y  II    +  +++
Sbjct: 372 EEGIEMSLVTYSVIVGGFSKAGHAEAADYWFDEAKRIHKTLNASIYGKIIYAHCQTCNME 431

Query: 483 AAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVM 542
            A  L  EM  +G    +  Y+ M+       + +  L +++ ++  GF P  VTY  ++
Sbjct: 432 RAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKECGFTPTVVTYGCLI 491

Query: 543 EVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLR 602
            +    G + +A  V   M+ +    +   Y ++++ + K  +   A+  +E M++ G++
Sbjct: 492 NLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGMK 551

Query: 603 PNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
           P+V   N+++SAF  +G +  A   ++ M  L  +P+ +T+  ++
Sbjct: 552 PDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPII 596


>gi|83744086|gb|ABC42329.1| PPR protein [Oryza sativa Indica Group]
          Length = 761

 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 81/295 (27%), Positives = 153/295 (51%), Gaps = 5/295 (1%)

Query: 359 DEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVF 418
           D  TY++++  L + +      ++L  MV++G  PN  TY  ++H Y  +    EA+   
Sbjct: 230 DVVTYSSIIAALCKGQAMDKAMEVLTSMVKNGVMPNCRTYTSIMHGYCSSGQPKEAIGFL 289

Query: 419 KQMQVVGCEPDRV-----TYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIIN 473
           K+++  G EPD +     TYCTL+  +A  G L     +   M   G+ PD + Y+++I 
Sbjct: 290 KKVRSDGVEPDGLEPDIATYCTLLQGYATKGALVGMHALLDLMVRNGIHPDHYVYNILIC 349

Query: 474 CLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEP 533
              K G +  A  +F +M  QG  P+ VTY  +I +  K+   + A+  +  M + G  P
Sbjct: 350 AYAKQGKVDEAMLVFSKMRQQGLNPDAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSP 409

Query: 534 DKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWY 593
             + Y+ ++  L  C   + AE +  EM  +    +   +  ++D   K G V ++ + +
Sbjct: 410 GNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLF 469

Query: 594 EAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
           + M++ G++P++ T ++L+  +   G++ +A  LL GM+++GLKP+  TY  L++
Sbjct: 470 DLMVRIGVKPDIITYSTLIDGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYRTLIN 524



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 90/311 (28%), Positives = 154/311 (49%), Gaps = 8/311 (2%)

Query: 343 ALGFFNWLRRQA----GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTY 398
           A+GF   +R       G + D  TY T++           ++ LLD MVR+G  P+   Y
Sbjct: 285 AIGFLKKVRSDGVEPDGLEPDIATYCTLLQGYATKGALVGMHALLDLMVRNGIHPDHYVY 344

Query: 399 NRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQA 458
           N LI +Y +   ++EA+ VF +M+  G  PD VTY  +I I  K+G ++ AM  +++M  
Sbjct: 345 NILICAYAKQGKVDEAMLVFSKMRQQGLNPDAVTYGAVIGILCKSGRVEDAMLYFEQMID 404

Query: 459 AGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQS 518
            GLSP    Y+ +I+ L      + A +L  EM+++G   N + +N +I    K      
Sbjct: 405 EGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIE 464

Query: 519 ALKLYRDMQNAGFEPDKVTYSIVMEVLGHC--GYLDEAEAVFAEMRRKNWVPDEPVYGLL 576
           + KL+  M   G +PD +TYS +++  G+C  G +DEA  + + M      P+   Y  L
Sbjct: 465 SEKLFDLMVRIGVKPDIITYSTLID--GYCLAGKMDEAMKLLSGMVSVGLKPNTVTYRTL 522

Query: 577 VDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGL 636
           ++ + K   +  A   ++ M  +G+ P++ T N +L    +  + + A  L   +   G 
Sbjct: 523 INGYCKISRMGDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGT 582

Query: 637 KPSLQTYTLLL 647
           +  L TY ++L
Sbjct: 583 QIELSTYNIIL 593



 Score =  118 bits (295), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 89/336 (26%), Positives = 144/336 (42%), Gaps = 46/336 (13%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRAN-- 409
           RQ G   D  TY  ++GIL ++ +        +QM+ +G  P  + YN LIH     N  
Sbjct: 368 RQQGLNPDAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKW 427

Query: 410 --------------------YLNEALD-------------VFKQMQVVGCEPDRVTYCTL 436
                               + N  +D             +F  M  +G +PD +TY TL
Sbjct: 428 ERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTL 487

Query: 437 IDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGC 496
           ID +  AG +D AM +   M + GL P+T TY  +IN   K   +  A  LF EM + G 
Sbjct: 488 IDGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYRTLINGYCKISRMGDALVLFKEMESSGV 547

Query: 497 IPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEA 556
            P+++TYNI++    + R   +A +LY  +  +G + +  TY+I++  L      D+A  
Sbjct: 548 SPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALR 607

Query: 557 VFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFL 616
           +F  +   +   +   + +++D   K G   +A + + A    GL PN  T   +    +
Sbjct: 608 MFQNLCLMDLKLEARTFNIMIDALLKVGRNGEAKDLFVAFSSNGLVPNYWTYRLMAENII 667

Query: 617 RVGQLSDAYHLL-----------QGMLNLGLKPSLQ 641
             G L +   L             GMLN  ++  LQ
Sbjct: 668 GQGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQ 703



 Score =  115 bits (289), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 68/244 (27%), Positives = 130/244 (53%)

Query: 381 KLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIH 440
           KL D MVR G +P+++TY+ LI  Y  A  ++EA+ +   M  VG +P+ VTY TLI+ +
Sbjct: 467 KLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYRTLINGY 526

Query: 441 AKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNL 500
            K   +  A+ ++K+M+++G+SPD  TY++I+  L +     AA +L+  +   G    L
Sbjct: 527 CKISRMGDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIEL 586

Query: 501 VTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAE 560
            TYNI++    K +    AL++++++     + +  T++I+++ L   G   EA+ +F  
Sbjct: 587 STYNIILHGLCKNKLTDDALRMFQNLCLMDLKLEARTFNIMIDALLKVGRNGEAKDLFVA 646

Query: 561 MRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQ 620
                 VP+   Y L+ +     G + +  + + +M   G   +    N ++   L+ G+
Sbjct: 647 FSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQRGE 706

Query: 621 LSDA 624
           ++ A
Sbjct: 707 ITRA 710



 Score =  114 bits (286), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 86/309 (27%), Positives = 143/309 (46%), Gaps = 10/309 (3%)

Query: 353 QAGFKHDEHTYTTMV-GILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           + GF+ +  T+T ++ G+    R   A++ +L +M    C P+V +   L+      N  
Sbjct: 115 KKGFRVEAITFTPLLKGLCADKRTSDAMDIVLRRMTELSCMPDVFSCTILLKGLCDENRS 174

Query: 412 NEALDVFKQM---QVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTY 468
            EAL++   M   +  G  PD V+Y T+I+   K G    A   Y +M    +SPD  TY
Sbjct: 175 QEALELPHMMADGRGGGSAPDVVSYTTVINGFFKEGDSGKAYSTYHEMLDRRISPDVVTY 234

Query: 469 SVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQN 528
           S II  L K   +  A ++   MV  G +PN  TY  ++     +   + A+   + +++
Sbjct: 235 SSIIAALCKGQAMDKAMEVLTSMVKNGVMPNCRTYTSIMHGYCSSGQPKEAIGFLKKVRS 294

Query: 529 AGFEPDKV-----TYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKA 583
            G EPD +     TY  +++     G L    A+   M R    PD  VY +L+  + K 
Sbjct: 295 DGVEPDGLEPDIATYCTLLQGYATKGALVGMHALLDLMVRNGIHPDHYVYNILICAYAKQ 354

Query: 584 GNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTY 643
           G V +A   +  M Q GL P+  T  +++    + G++ DA    + M++ GL P    Y
Sbjct: 355 GKVDEAMLVFSKMRQQGLNPDAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVY 414

Query: 644 -TLLLSCCT 651
            +L+   CT
Sbjct: 415 NSLIHGLCT 423


>gi|302784232|ref|XP_002973888.1| hypothetical protein SELMODRAFT_100264 [Selaginella moellendorffii]
 gi|300158220|gb|EFJ24843.1| hypothetical protein SELMODRAFT_100264 [Selaginella moellendorffii]
          Length = 399

 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 96/298 (32%), Positives = 152/298 (51%), Gaps = 5/298 (1%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           +    K D  T+ T++  L +A +     ++LD+M R G   N+VTYN LI+    A   
Sbjct: 81  KDGACKPDVVTFNTLIAGLCKAGRLDEAQQVLDEMERSGFAANLVTYNTLINGLSSAGRS 140

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKM-QAAGLSPDTFTYSV 470
            EA+ V + M      PD  TY  +I    K+G +D A    ++M Q AG SPDTFTYS+
Sbjct: 141 GEAVLVMQGMTTT---PDTQTYNAIIHGFCKSGEIDRAYGFLEEMKQRAGCSPDTFTYSI 197

Query: 471 IINCLGKAGHLQAAHQLFCEMVN-QGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNA 529
           +IN L K+ +L+ A +L  EM+  + C  ++V +N ++    KA++   A +L   M   
Sbjct: 198 LINGLCKSSNLRKADELLQEMIGRKDCCASVVAFNTLVDGYCKAQDLDRARELLSSMLEH 257

Query: 530 GFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKA 589
           G  PD VTYS +++ L  CG +D+  A+  +M  +   PD   Y +LV    KAG + +A
Sbjct: 258 GCAPDVVTYSTIIDGLCRCGDVDKGFALLEKMVSRGCKPDVVTYTVLVTGLCKAGKMVEA 317

Query: 590 WEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
               + ML+ G  PN  T + +     ++ +L  A  LL  + + G    +  +  LL
Sbjct: 318 CRLVKRMLEDGCTPNAVTYSLVFDGLCKIDKLDMANDLLTSIRDKGRITDVVAFEALL 375



 Score =  134 bits (338), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 95/295 (32%), Positives = 150/295 (50%), Gaps = 10/295 (3%)

Query: 359 DEHTYTTMVGILGRARQFGAINKLLDQMVRD-GCQPNVVTYNRLIHSYGRANYLNEALDV 417
           D +TY  +V     A +  A   LL +M +  G  P    YN  +H+  ++  + EA++V
Sbjct: 17  DNYTYFVLVRAHCLAGELQAAMDLLREMEQQPGMAPTPSMYNFFVHALCKSGKVPEAMEV 76

Query: 418 FKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGK 477
            K M+   C+PD VT+ TLI    KAG LD A  +  +M+ +G + +  TY+ +IN L  
Sbjct: 77  VKNMKDGACKPDVVTFNTLIAGLCKAGRLDEAQQVLDEMERSGFAANLVTYNTLINGLSS 136

Query: 478 AGHLQAAHQLFCEMVNQG--CIPNLVTYNIMIALQAKARNYQSALKLYRDM-QNAGFEPD 534
           AG    A      +V QG    P+  TYN +I    K+     A     +M Q AG  PD
Sbjct: 137 AGRSGEAV-----LVMQGMTTTPDTQTYNAIIHGFCKSGEIDRAYGFLEEMKQRAGCSPD 191

Query: 535 KVTYSIVMEVLGHCGYLDEAEAVFAEM-RRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWY 593
             TYSI++  L     L +A+ +  EM  RK+       +  LVD + KA ++ +A E  
Sbjct: 192 TFTYSILINGLCKSSNLRKADELLQEMIGRKDCCASVVAFNTLVDGYCKAQDLDRARELL 251

Query: 594 EAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
            +ML+ G  P+V T ++++    R G +   + LL+ M++ G KP + TYT+L++
Sbjct: 252 SSMLEHGCAPDVVTYSTIIDGLCRCGDVDKGFALLEKMVSRGCKPDVVTYTVLVT 306



 Score =  113 bits (282), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 63/201 (31%), Positives = 104/201 (51%), Gaps = 1/201 (0%)

Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMV-RDGCQPNVVTYNRL 401
           A GF   ++++AG   D  TY+ ++  L ++      ++LL +M+ R  C  +VV +N L
Sbjct: 175 AYGFLEEMKQRAGCSPDTFTYSILINGLCKSSNLRKADELLQEMIGRKDCCASVVAFNTL 234

Query: 402 IHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGL 461
           +  Y +A  L+ A ++   M   GC PD VTY T+ID   + G +D    + +KM + G 
Sbjct: 235 VDGYCKAQDLDRARELLSSMLEHGCAPDVVTYSTIIDGLCRCGDVDKGFALLEKMVSRGC 294

Query: 462 SPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALK 521
            PD  TY+V++  L KAG +  A +L   M+  GC PN VTY+++     K      A  
Sbjct: 295 KPDVVTYTVLVTGLCKAGKMVEACRLVKRMLEDGCTPNAVTYSLVFDGLCKIDKLDMAND 354

Query: 522 LYRDMQNAGFEPDKVTYSIVM 542
           L   +++ G   D V +  ++
Sbjct: 355 LLTSIRDKGRITDVVAFEALL 375



 Score = 66.6 bits (161), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 58/214 (27%), Positives = 95/214 (44%), Gaps = 7/214 (3%)

Query: 276 REMKIPAGLAPFSRHFASTGNVVESVSRILRQWKWGPLAEEALGNTNYSMDAYQANQVLK 335
            EMK  AG +P +  ++   N +   S +    K   L +E +G  +        N ++ 
Sbjct: 180 EEMKQRAGCSPDTFTYSILINGLCKSSNL---RKADELLQEMIGRKDCCASVVAFNTLVD 236

Query: 336 ---QLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQ 392
              + QD   A    + +    G   D  TY+T++  L R         LL++MV  GC+
Sbjct: 237 GYCKAQDLDRARELLSSMLEH-GCAPDVVTYSTIIDGLCRCGDVDKGFALLEKMVSRGCK 295

Query: 393 PNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDM 452
           P+VVTY  L+    +A  + EA  + K+M   GC P+ VTY  + D   K   LD+A D+
Sbjct: 296 PDVVTYTVLVTGLCKAGKMVEACRLVKRMLEDGCTPNAVTYSLVFDGLCKIDKLDMANDL 355

Query: 453 YKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQ 486
              ++  G   D   +  ++  + K    +AA Q
Sbjct: 356 LTSIRDKGRITDVVAFEALLLSVKKRLLDRAAFQ 389


>gi|356532363|ref|XP_003534743.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16390,
           chloroplastic-like [Glycine max]
          Length = 693

 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 122/550 (22%), Positives = 241/550 (43%), Gaps = 46/550 (8%)

Query: 282 AGLAPFSRHFASTGNVVESVSRILRQWKWGPLAEEALGNTNYSMDAYQANQVLKQLQDHT 341
           + L   ++   S     E VS IL            LGN     DA     +L  + +  
Sbjct: 92  SSLTKLAKSLDSCNPTEEHVSEILN----------VLGNNVAERDAVF---ILNTMANPN 138

Query: 342 VALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRL 401
            AL    + +++         Y   + +L   + F    KL D+M++ G +PN++T++ +
Sbjct: 139 TALLALKYFQQKISPGKHVVLYNVTLKVLREVKDFEGSEKLFDEMLQRGVEPNLITFSTI 198

Query: 402 IHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGL 461
           I S    +  ++A++ F++M   G EPD      +I  +A +G  D+A+ +Y + +A   
Sbjct: 199 ISSASVCSLPDKAMEWFEKMPSFGVEPDASVASFMIHAYAHSGNADMALKLYGRAKAEKW 258

Query: 462 SPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALK 521
             DT  +S +I   G   +      ++ +M   G  PN+VTYN ++    +A+    A  
Sbjct: 259 RVDTAAFSALIKMCGMLENFDGCLSVYNDMKVLGAKPNMVTYNALLYAMGRAKRALDAKA 318

Query: 522 LYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWG 581
           +Y +M + GF P+  T++ +++      + ++A  V+ EM+         +Y  L+ +  
Sbjct: 319 IYEEMISNGFSPNWPTHAALLQAYCKARFPEDALGVYKEMKGNGMDITADLYNKLLAMCA 378

Query: 582 KAGNVRKAWEWYEAMLQAG-LRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSL 640
             G   +A E +  M  +G  +P+  T +S+++ + R G++S+A  +L  M+  G +P++
Sbjct: 379 DVGYTDRASEIFYEMKSSGTCQPDSWTFSSMITMYSRSGKVSEAEGMLNEMIQSGFQPTI 438

Query: 641 QTYTLLLSCCTEARSPYD-MGFCHELMAVSGHPAHMFLLSM-----PSPGPDGQNVRDHV 694
              T L+ C  +A+   D +    +L+ +   P   F  S+      +P  +   + D +
Sbjct: 439 FVMTSLICCYGKAKRTDDVVKIFKQLLDLGIVPNDHFCCSLLNVLTQTPKEELGKLTDCI 498

Query: 695 -------------------------GSFLEMMHSEDRESKRGLVDAVVDFLHKSGLKEEA 729
                                       LE+++S D E K+ L + ++D   K  + E A
Sbjct: 499 EKANTKLGTVVRYLMEELEGDEAFRKEALELLNSIDAEVKKPLCNCLIDLCVKLNVPERA 558

Query: 730 GSVWEVAAQKNVYPDAVKEKGMSYWLINLHVMSDGTAVIALSRTLAWFRKQMLISGVGPS 789
             + ++     +Y + ++ K  + W ++L  +S G A+ AL   +    K +      P 
Sbjct: 559 RDLLDLGLMLEIYTN-IQFKSQTQWSLHLKELSVGAAMTALHVWINELSKALESGEDLPP 617

Query: 790 RIDIVTGWGR 799
            + I TG G+
Sbjct: 618 LLGINTGQGK 627


>gi|449460167|ref|XP_004147817.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g19290-like [Cucumis sativus]
          Length = 942

 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 124/477 (25%), Positives = 216/477 (45%), Gaps = 45/477 (9%)

Query: 293 STGNVVESVSRILRQWKWGPLAEEALGNTNYSMDAYQANQVLKQLQ-DHTVALGFFNWLR 351
           S  ++V+ +SR+L   ++     +AL N ++S      + VL+ L+ +   +L FF    
Sbjct: 69  SQPDLVDRISRLLVLRRF-----DALANLSFSFSNELMDLVLRNLRLNPDASLEFFKLAS 123

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVV--------------- 396
           +Q  F+ D  +Y  +V IL RAR +  +   L+++V   C+ N +               
Sbjct: 124 KQPKFRPDVSSYCKIVHILSRARMYKEVRVYLNELVV-LCKNNYIASAVWDELVSVYREF 182

Query: 397 -----TYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMD 451
                 ++ ++  +        AL VF  M   G  P   +  +L+    + G    A+ 
Sbjct: 183 SFSPTVFDMILKVFAEKGMTKFALCVFDNMGKCGRVPSLRSCNSLLSNLVQNGEAFKALL 242

Query: 452 MYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQA 511
           +Y++M A G+ PD F+Y++++N   K G +  A     EM    C PN+VTYN +I    
Sbjct: 243 VYEQMIALGILPDIFSYTIMVNAYCKEGRVDEAFNFVKEMERSCCEPNVVTYNSLIDGYV 302

Query: 512 KARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHC--GYLDEAEAVFAEMRRKNWVPD 569
              +   A K+   M   G   +  TY+++++  G+C  G +++AE +   M  KN   D
Sbjct: 303 SLGDVCGAKKVLALMSEKGIPENSRTYTLLIK--GYCKRGQMEQAEKLIGCMMEKNLFVD 360

Query: 570 EPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQ 629
           E VYG+L+  +  AG V  A    +AML+ GL+ N   CNSL++ + ++G ++ A  +L 
Sbjct: 361 EHVYGVLIHAYCTAGRVDDALRIRDAMLKVGLKMNTVICNSLINGYCKLGHVNKAAEVLV 420

Query: 630 GMLNLGLKPSLQTY-TLLLSCCTEARSPYDMGFCHELMAVSGHPAHMFLLSMPSPGPDGQ 688
            M +  LKP    Y TLL   C +         C E+     +       ++ +     +
Sbjct: 421 SMKDWNLKPDSYGYNTLLDGFCKQEDFIKAFKLCDEMHNKGVN------FTVVTYNTLLK 474

Query: 689 NVRDHVGSFLEMMHSEDRESKRGLVD------AVVDFLHKSGLKEEAGSVWEVAAQK 739
           N+  HVG     +H  +   KRG+         ++D   K G  + A  +W+ A  K
Sbjct: 475 NLF-HVGHVEHALHIWNLMHKRGVAPNEVTYCTLLDAFFKVGTFDRAMMIWKDALSK 530



 Score =  122 bits (306), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 77/279 (27%), Positives = 129/279 (46%)

Query: 356 FKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEAL 415
            K D + Y T++    +   F    KL D+M   G    VVTYN L+ +     ++  AL
Sbjct: 427 LKPDSYGYNTLLDGFCKQEDFIKAFKLCDEMHNKGVNFTVVTYNTLLKNLFHVGHVEHAL 486

Query: 416 DVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCL 475
            ++  M   G  P+ VTYCTL+D   K G  D AM ++K   + G +     Y+ +I   
Sbjct: 487 HIWNLMHKRGVAPNEVTYCTLLDAFFKVGTFDRAMMIWKDALSKGFTKSITLYNTMICGF 546

Query: 476 GKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDK 535
            K   L  A ++F +M   G  P+ +TY  +I    K  N   ALKL    +  G     
Sbjct: 547 CKMEKLVQAQEIFLKMKELGFPPDEITYRTLIDGYCKVGNLVEALKLKDMSERDGISSST 606

Query: 536 VTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEA 595
             Y+ ++  +     L +   + AEM+ +   P+   YG L+  W   G + KA+  Y  
Sbjct: 607 EMYNSLITGVFRSEELQKLNGLLAEMKNRELSPNVVTYGSLIAGWCDKGMMDKAYNAYFK 666

Query: 596 MLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNL 634
           M+  G+ PN+   + ++S+  R G++ +A  +L  + ++
Sbjct: 667 MIDKGIAPNIIIGSKIVSSLYRHGKIDEANLILHQIADI 705



 Score =  115 bits (287), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 93/351 (26%), Positives = 151/351 (43%), Gaps = 36/351 (10%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           ++ GF  DE TY T++    +        KL D   RDG   +   YN LI    R+  L
Sbjct: 563 KELGFPPDEITYRTLIDGYCKVGNLVEALKLKDMSERDGISSSTEMYNSLITGVFRSEEL 622

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
            +   +  +M+     P+ VTY +LI      G +D A + Y KM   G++P+    S I
Sbjct: 623 QKLNGLLAEMKNRELSPNVVTYGSLIAGWCDKGMMDKAYNAYFKMIDKGIAPNIIIGSKI 682

Query: 472 INCLGKAGHLQAA----HQL-------------------------------FCEMVNQGC 496
           ++ L + G +  A    HQ+                               F +      
Sbjct: 683 VSSLYRHGKIDEANLILHQIADIDPIAAHAHSVELPKSDLRHLETQKIVDSFGKKAMSIP 742

Query: 497 IPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEA 556
           I N + YNI I    K++N     ++  D+   GF PD  TY  ++      G ++EA  
Sbjct: 743 ISNNIVYNIAITGLCKSKNIDDVRRILSDLLLKGFCPDNYTYCSLIHACSAVGKVNEAFC 802

Query: 557 VFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFL 616
           +  +M     VP+  VY  L++   K+GN+ +A   +  + + GL P V T N+L+  + 
Sbjct: 803 LRDDMINAGLVPNIVVYNALINGLCKSGNLDRARRLFNKLARKGLSPTVVTYNTLIDGYC 862

Query: 617 RVGQLSDAYHLLQGMLNLGLKPSLQTY-TLLLSCCTEARSPYDMGFCHELM 666
           + G+ ++A  L   M   G+ PS  TY TL+     E +S   +G  +E+M
Sbjct: 863 KGGRTTEALELKDKMREEGICPSSITYSTLIHGLYMEGKSEQSVGLLNEMM 913



 Score =  114 bits (286), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 78/295 (26%), Positives = 141/295 (47%), Gaps = 10/295 (3%)

Query: 359 DEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVF 418
           DEH Y  ++     A +     ++ D M++ G + N V  N LI+ Y +  ++N+A +V 
Sbjct: 360 DEHVYGVLIHAYCTAGRVDDALRIRDAMLKVGLKMNTVICNSLINGYCKLGHVNKAAEVL 419

Query: 419 KQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKA 478
             M+    +PD   Y TL+D   K      A  +  +M   G++    TY+ ++  L   
Sbjct: 420 VSMKDWNLKPDSYGYNTLLDGFCKQEDFIKAFKLCDEMHNKGVNFTVVTYNTLLKNLFHV 479

Query: 479 GHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTY 538
           GH++ A  ++  M  +G  PN VTY  ++    K   +  A+ +++D  + GF      Y
Sbjct: 480 GHVEHALHIWNLMHKRGVAPNEVTYCTLLDAFFKVGTFDRAMMIWKDALSKGFTKSITLY 539

Query: 539 SIVMEVLGHCGY-----LDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWY 593
           + ++     CG+     L +A+ +F +M+   + PDE  Y  L+D + K GN+ +A +  
Sbjct: 540 NTMI-----CGFCKMEKLVQAQEIFLKMKELGFPPDEITYRTLIDGYCKVGNLVEALKLK 594

Query: 594 EAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
           +   + G+  +    NSL++   R  +L     LL  M N  L P++ TY  L++
Sbjct: 595 DMSERDGISSSTEMYNSLITGVFRSEELQKLNGLLAEMKNRELSPNVVTYGSLIA 649



 Score =  108 bits (271), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 82/328 (25%), Positives = 136/328 (41%), Gaps = 35/328 (10%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           G   D  +YT MV    +  +       + +M R  C+PNVVTYN LI  Y     +  A
Sbjct: 251 GILPDIFSYTIMVNAYCKEGRVDEAFNFVKEMERSCCEPNVVTYNSLIDGYVSLGDVCGA 310

Query: 415 LDVFKQM-----------------------------QVVGCE------PDRVTYCTLIDI 439
             V   M                             +++GC        D   Y  LI  
Sbjct: 311 KKVLALMSEKGIPENSRTYTLLIKGYCKRGQMEQAEKLIGCMMEKNLFVDEHVYGVLIHA 370

Query: 440 HAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPN 499
           +  AG +D A+ +   M   GL  +T   + +IN   K GH+  A ++   M +    P+
Sbjct: 371 YCTAGRVDDALRIRDAMLKVGLKMNTVICNSLINGYCKLGHVNKAAEVLVSMKDWNLKPD 430

Query: 500 LVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFA 559
              YN ++    K  ++  A KL  +M N G     VTY+ +++ L H G+++ A  ++ 
Sbjct: 431 SYGYNTLLDGFCKQEDFIKAFKLCDEMHNKGVNFTVVTYNTLLKNLFHVGHVEHALHIWN 490

Query: 560 EMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVG 619
            M ++   P+E  Y  L+D + K G   +A   ++  L  G   ++   N+++  F ++ 
Sbjct: 491 LMHKRGVAPNEVTYCTLLDAFFKVGTFDRAMMIWKDALSKGFTKSITLYNTMICGFCKME 550

Query: 620 QLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
           +L  A  +   M  LG  P   TY  L+
Sbjct: 551 KLVQAQEIFLKMKELGFPPDEITYRTLI 578



 Score = 99.8 bits (247), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 89/368 (24%), Positives = 160/368 (43%), Gaps = 45/368 (12%)

Query: 321 TNYSMDAYQANQVLKQL-----QDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQ 375
            N+++  Y  N +LK L      +H  AL  +N + ++ G   +E TY T++    +   
Sbjct: 462 VNFTVVTY--NTLLKNLFHVGHVEH--ALHIWNLMHKR-GVAPNEVTYCTLLDAFFKVGT 516

Query: 376 FGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCT 435
           F     +    +  G   ++  YN +I  + +   L +A ++F +M+ +G  PD +TY T
Sbjct: 517 FDRAMMIWKDALSKGFTKSITLYNTMICGFCKMEKLVQAQEIFLKMKELGFPPDEITYRT 576

Query: 436 LIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQG 495
           LID + K G L  A+ +    +  G+S  T  Y+ +I  + ++  LQ  + L  EM N+ 
Sbjct: 577 LIDGYCKVGNLVEALKLKDMSERDGISSSTEMYNSLITGVFRSEELQKLNGLLAEMKNRE 636

Query: 496 CIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAE 555
             PN+VTY  +IA          A   Y  M + G  P+ +  S ++  L   G +DEA 
Sbjct: 637 LSPNVVTYGSLIAGWCDKGMMDKAYNAYFKMIDKGIAPNIIIGSKIVSSLYRHGKIDEAN 696

Query: 556 AVFAEM---------------------------------RRKNWVP--DEPVYGLLVDLW 580
            +  ++                                 ++   +P  +  VY + +   
Sbjct: 697 LILHQIADIDPIAAHAHSVELPKSDLRHLETQKIVDSFGKKAMSIPISNNIVYNIAITGL 756

Query: 581 GKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSL 640
            K+ N+         +L  G  P+  T  SL+ A   VG++++A+ L   M+N GL P++
Sbjct: 757 CKSKNIDDVRRILSDLLLKGFCPDNYTYCSLIHACSAVGKVNEAFCLRDDMINAGLVPNI 816

Query: 641 QTYTLLLS 648
             Y  L++
Sbjct: 817 VVYNALIN 824



 Score = 84.0 bits (206), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 69/321 (21%), Positives = 130/321 (40%), Gaps = 35/321 (10%)

Query: 350 LRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRAN 409
           +  + G       Y +++  + R+ +   +N LL +M      PNVVTY  LI  +    
Sbjct: 596 MSERDGISSSTEMYNSLITGVFRSEELQKLNGLLAEMKNRELSPNVVTYGSLIAGWCDKG 655

Query: 410 YLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVA-------------------- 449
            +++A + + +M   G  P+ +    ++    + G +D A                    
Sbjct: 656 MMDKAYNAYFKMIDKGIAPNIIIGSKIVSSLYRHGKIDEANLILHQIADIDPIAAHAHSV 715

Query: 450 ---------------MDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQ 494
                          +D + K   +    +   Y++ I  L K+ ++    ++  +++ +
Sbjct: 716 ELPKSDLRHLETQKIVDSFGKKAMSIPISNNIVYNIAITGLCKSKNIDDVRRILSDLLLK 775

Query: 495 GCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEA 554
           G  P+  TY  +I   +       A  L  DM NAG  P+ V Y+ ++  L   G LD A
Sbjct: 776 GFCPDNYTYCSLIHACSAVGKVNEAFCLRDDMINAGLVPNIVVYNALINGLCKSGNLDRA 835

Query: 555 EAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSA 614
             +F ++ RK   P    Y  L+D + K G   +A E  + M + G+ P+  T ++L+  
Sbjct: 836 RRLFNKLARKGLSPTVVTYNTLIDGYCKGGRTTEALELKDKMREEGICPSSITYSTLIHG 895

Query: 615 FLRVGQLSDAYHLLQGMLNLG 635
               G+   +  LL  M+  G
Sbjct: 896 LYMEGKSEQSVGLLNEMMKAG 916


>gi|410109903|gb|AFV61031.1| pentatricopeptide repeat-containing protein 11, partial [Lantana
           montevidensis]
          Length = 431

 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 86/279 (30%), Positives = 149/279 (53%)

Query: 370 LGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPD 429
           L + + F  +    ++++  G   ++  +N L+H + +   +  A  VF  +   G  P 
Sbjct: 117 LMKLKYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRIAQSVFDAITKWGLRPS 176

Query: 430 RVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFC 489
            V+Y TL++ + + G LD    +   M A+G+ PD +TYSV+IN L K   +  A++LF 
Sbjct: 177 VVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKIDDANELFD 236

Query: 490 EMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCG 549
           EM+ +G +PN VT+  +I    K      A+++Y+ M +    PD +TY+ ++  L   G
Sbjct: 237 EMLVKGLVPNSVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKG 296

Query: 550 YLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCN 609
            L +A  +  EM  K   PD+  Y  L+D   K G++  A+E  + M+Q   R +     
Sbjct: 297 DLKQAHHLIDEMSMKGLKPDKITYTTLIDGCCKDGDLDTAFEHRKRMIQENTRLDDVVYT 356

Query: 610 SLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
           +L+S   R GQ  DA  +L+ ML++GLKP  +TYT++++
Sbjct: 357 ALISGLCREGQSVDAEKMLREMLSVGLKPDARTYTMIIN 395



 Score =  129 bits (325), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 84/315 (26%), Positives = 156/315 (49%), Gaps = 1/315 (0%)

Query: 334 LKQLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQP 393
           L +L+   +  GF+  +  + G+    + +  ++    +         + D + + G +P
Sbjct: 117 LMKLKYFKLVWGFYEEIL-ECGYPASLYFFNILMHRFCKDGDIRIAQSVFDAITKWGLRP 175

Query: 394 NVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMY 453
           +VV+YN L++ Y R   L+E   +   M   G +PD  TY  LI+   K   +D A +++
Sbjct: 176 SVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKIDDANELF 235

Query: 454 KKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKA 513
            +M   GL P++ T++ +I+   K G +  A +++ +M++Q   P+L+TYN +I    K 
Sbjct: 236 DEMLVKGLVPNSVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKK 295

Query: 514 RNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVY 573
            + + A  L  +M   G +PDK+TY+ +++     G LD A      M ++N   D+ VY
Sbjct: 296 GDLKQAHHLIDEMSMKGLKPDKITYTTLIDGCCKDGDLDTAFEHRKRMIQENTRLDDVVY 355

Query: 574 GLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLN 633
             L+    + G    A +    ML  GL+P+  T   +++ F + G +     LL+ M  
Sbjct: 356 TALISGLCREGQSVDAEKMLREMLSVGLKPDARTYTMIINEFCKKGDVWKGSKLLKEMQR 415

Query: 634 LGLKPSLQTYTLLLS 648
            G  PS+ TY +L++
Sbjct: 416 DGHVPSVVTYNVLMN 430



 Score =  116 bits (291), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 85/341 (24%), Positives = 152/341 (44%), Gaps = 23/341 (6%)

Query: 344 LGFFNWLRRQAG--FKHDEHTYTTMVGILGRARQFGAINKLLDQMV-------------- 387
             FF WL   A   F+H  H+Y TM+  L   +       L+  +V              
Sbjct: 1   FSFFTWLSSPANSTFRHTLHSYCTMIHFLCTHQMLSEAKSLIQVVVSRKGKGSASAVFAA 60

Query: 388 ---RDGCQ-PNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKA 443
                G Q  ++  ++ LI +Y  + +L +A++ ++  +         T   +++   K 
Sbjct: 61  IFETKGTQRSDLYVFSGLITAYLESGFLRDAIECYRLTREHKFWVPFDTCRKVLEHLMKL 120

Query: 444 GFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTY 503
            +  +    Y+++   G     + ++++++   K G ++ A  +F  +   G  P++V+Y
Sbjct: 121 KYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRIAQSVFDAITKWGLRPSVVSY 180

Query: 504 NIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRR 563
           N ++    +  +     +L   M  +G +PD  TYS+++  L     +D+A  +F EM  
Sbjct: 181 NTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKIDDANELFDEMLV 240

Query: 564 KNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSD 623
           K  VP+   +  L+D   K G V  A E Y+ ML   L P++ T N+L+    + G L  
Sbjct: 241 KGLVPNSVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQ 300

Query: 624 AYHLLQGMLNLGLKPSLQTYTLLLS-CCTEARSPYDMGFCH 663
           A+HL+  M   GLKP   TYT L+  CC +     D  F H
Sbjct: 301 AHHLIDEMSMKGLKPDKITYTTLIDGCCKDG--DLDTAFEH 339


>gi|302826367|ref|XP_002994672.1| hypothetical protein SELMODRAFT_432576 [Selaginella moellendorffii]
 gi|300137182|gb|EFJ04264.1| hypothetical protein SELMODRAFT_432576 [Selaginella moellendorffii]
          Length = 816

 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 96/294 (32%), Positives = 143/294 (48%), Gaps = 8/294 (2%)

Query: 347 FNWLRRQAGFKH--DEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHS 404
           F  L+R     H  D  TY+T++  L    +      LL+ MV+  C+P VVT N LIH 
Sbjct: 492 FRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHG 551

Query: 405 YGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPD 464
             +A  + EA +V   M   G  PD VTY TL+  H +AG  + A ++   M A GL+P+
Sbjct: 552 LCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAPN 611

Query: 465 TFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYR 524
             TY+ +++ L KA  L  A  +F +M + GC PNL TY  +I     A      LKL+ 
Sbjct: 612 VVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLFTYTALILGFCSAGQVDGGLKLFG 671

Query: 525 DMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAE----MRRKNWVPDEPVYGLLVDLW 580
           +M  AG  PD V Y  +   L   G    A  +  E    +R + W   + VY   VD  
Sbjct: 672 EMVCAGISPDHVVYGTLAAELCKSGRSARALEILREGRESLRSEAW--GDEVYRFAVDGL 729

Query: 581 GKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNL 634
            +AG +  A  +   M++ G  P    C SL++   + GQ  +A  +L+ +++L
Sbjct: 730 LEAGKMEMALGFVRDMVRGGQLPAPERCASLVAGLCKSGQGGEARAVLEEIMDL 783



 Score =  133 bits (335), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 92/306 (30%), Positives = 145/306 (47%), Gaps = 14/306 (4%)

Query: 362 TYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQM 421
           TY  M+    +         L+ +M+ DG  P+VVTYN ++    +++ + EAL +F +M
Sbjct: 395 TYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKSSRVEEALLLFNEM 454

Query: 422 QVVGCEPDRVTYCTLI---------DIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
           + +GC P+R ++ T+I         D   + G LD A  + K+M   G  PD  TYS +I
Sbjct: 455 ERLGCTPNRRSHNTIILGLCQQSKIDQACQRGKLDEAFRLLKRMTDDGHVPDVVTYSTLI 514

Query: 473 NCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFE 532
           + L     +  A  L  +MV + C P +VT N +I    KA   + A ++   M ++G  
Sbjct: 515 SGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQS 574

Query: 533 PDKVTYSIVMEVLGHC--GYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAW 590
           PD VTY+ +  V GHC  G  + A  + ++M  +   P+   Y  LV    KA  + +A 
Sbjct: 575 PDVVTYNTL--VHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEAC 632

Query: 591 EWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTY-TLLLSC 649
             +  M  +G  PN+ T  +L+  F   GQ+     L   M+  G+ P    Y TL    
Sbjct: 633 GVFAQMKSSGCAPNLFTYTALILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTLAAEL 692

Query: 650 CTEARS 655
           C   RS
Sbjct: 693 CKSGRS 698



 Score =  132 bits (331), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 85/267 (31%), Positives = 139/267 (52%), Gaps = 10/267 (3%)

Query: 398 YNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQ 457
           YN +I    + + ++EA+ +F++M      PD  +Y  LID  AKAG L+ A ++++K+ 
Sbjct: 291 YNIVILGLCQNDRIDEAVQMFEKMNERNVSPDSWSYGILIDGLAKAGKLNDARNLFQKLL 350

Query: 458 AAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQ 517
            +G++P T  Y+ +I+ L  A     A +LF +M  +GC P+ VTYN+MI    K    +
Sbjct: 351 HSGVTPSTVAYTSLIHGLCMANSFDDARELFADMNRRGCPPSPVTYNVMIDASCKRGMLE 410

Query: 518 SALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEP-----V 572
            A  L + M   G  PD VTY+ VM+ L     ++EA  +F EM R    P+       +
Sbjct: 411 EACDLIKKMIEDGHVPDVVTYNTVMDGLCKSSRVEEALLLFNEMERLGCTPNRRSHNTII 470

Query: 573 YGLL----VDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLL 628
            GL     +D   + G + +A+   + M   G  P+V T ++L+S    + ++ DA HLL
Sbjct: 471 LGLCQQSKIDQACQRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLL 530

Query: 629 QGMLNLGLKPSLQTY-TLLLSCCTEAR 654
           + M+    KP++ T  TL+   C   R
Sbjct: 531 EDMVKRQCKPTVVTQNTLIHGLCKAGR 557



 Score =  123 bits (309), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 89/342 (26%), Positives = 158/342 (46%), Gaps = 55/342 (16%)

Query: 364 TTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQV 423
           + +VG++   R    I++ L     +  +P +VT N L+  +     +++A ++ + M  
Sbjct: 185 SVLVGLMDSGR----IDEALQVYRENRREPCLVTLNVLLEGFCSRGQVDKARELLRAMPD 240

Query: 424 VGCEPDRVTYCTLIDIHAKAG--------------------------------------- 444
             C PD V+YCT++D   KAG                                       
Sbjct: 241 EECAPDEVSYCTVLDGLCKAGRVEEAVRLFGDRELPSSSSSSSSPPSLRGYNIVILGLCQ 300

Query: 445 --FLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVT 502
              +D A+ M++KM    +SPD+++Y ++I+ L KAG L  A  LF ++++ G  P+ V 
Sbjct: 301 NDRIDEAVQMFEKMNERNVSPDSWSYGILIDGLAKAGKLNDARNLFQKLLHSGVTPSTVA 360

Query: 503 YNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMR 562
           Y  +I     A ++  A +L+ DM   G  P  VTY+++++     G L+EA  +  +M 
Sbjct: 361 YTSLIHGLCMANSFDDARELFADMNRRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMI 420

Query: 563 RKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRV---- 618
               VPD   Y  ++D   K+  V +A   +  M + G  PN  + N+++    +     
Sbjct: 421 EDGHVPDVVTYNTVMDGLCKSSRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKID 480

Query: 619 -----GQLSDAYHLLQGMLNLGLKPSLQTYTLLLS-CCTEAR 654
                G+L +A+ LL+ M + G  P + TY+ L+S  C+ AR
Sbjct: 481 QACQRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIAR 522



 Score =  110 bits (274), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 80/286 (27%), Positives = 135/286 (47%), Gaps = 9/286 (3%)

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANY-- 410
           + G   D  TY T++  L ++ +      L ++M R GC PN  ++N +I    + +   
Sbjct: 421 EDGHVPDVVTYNTVMDGLCKSSRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKID 480

Query: 411 -------LNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSP 463
                  L+EA  + K+M   G  PD VTY TLI        +D A  + + M      P
Sbjct: 481 QACQRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKP 540

Query: 464 DTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLY 523
              T + +I+ L KAG ++ A ++   MV+ G  P++VTYN ++    +A   + A +L 
Sbjct: 541 TVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELL 600

Query: 524 RDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKA 583
            DM   G  P+ VTY+ ++  L     L EA  VFA+M+     P+   Y  L+  +  A
Sbjct: 601 SDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLFTYTALILGFCSA 660

Query: 584 GNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQ 629
           G V    + +  M+ AG+ P+     +L +   + G+ + A  +L+
Sbjct: 661 GQVDGGLKLFGEMVCAGISPDHVVYGTLAAELCKSGRSARALEILR 706



 Score = 80.1 bits (196), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 82/364 (22%), Positives = 143/364 (39%), Gaps = 56/364 (15%)

Query: 324 SMDAYQANQVLKQLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLL 383
           S+   Q  + +K++    V  G F           D  T+TT++  L +A +      ++
Sbjct: 53  SLSKRQETEAVKKMVQVMVDRGCF----------PDSFTFTTILCGLCKAGKMDEAELVM 102

Query: 384 DQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKA 443
           D+M      P   T + L H       +  A  + + M V     +   Y  ++    KA
Sbjct: 103 DEMRSRMIPPYFATSSFLAHELCLRGSMERAFQLLEIMPVA----NSSAYNIVVVALCKA 158

Query: 444 GFLDVAMDMYKKMQ------AAG--------------------------LSPDTFTYSVI 471
             +D A+++ + M       AAG                            P   T +V+
Sbjct: 159 ARVDDALELARTMSEKRIPLAAGSLDSVLVGLMDSGRIDEALQVYRENRREPCLVTLNVL 218

Query: 472 INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF 531
           +      G +  A +L   M ++ C P+ V+Y  ++    KA   + A++L+ D +    
Sbjct: 219 LEGFCSRGQVDKARELLRAMPDEECAPDEVSYCTVLDGLCKAGRVEEAVRLFGDRELPSS 278

Query: 532 EPDKVT------YSIVMEVLGHC--GYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKA 583
                +      Y+IV  +LG C    +DEA  +F +M  +N  PD   YG+L+D   KA
Sbjct: 279 SSSSSSPPSLRGYNIV--ILGLCQNDRIDEAVQMFEKMNERNVSPDSWSYGILIDGLAKA 336

Query: 584 GNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTY 643
           G +  A   ++ +L +G+ P+     SL+          DA  L   M   G  PS  TY
Sbjct: 337 GKLNDARNLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDARELFADMNRRGCPPSPVTY 396

Query: 644 TLLL 647
            +++
Sbjct: 397 NVMI 400



 Score = 67.8 bits (164), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 76/328 (23%), Positives = 123/328 (37%), Gaps = 79/328 (24%)

Query: 393 PNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDM 452
           P+V  YN LI S  +         + + M   GC PD  T+ T++    KAG +D A  +
Sbjct: 44  PDV--YNVLIDSLSKRQETEAVKKMVQVMVDRGCFPDSFTFTTILCGLCKAGKMDEAELV 101

Query: 453 YKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAK 512
             +M++  + P   T S + + L   G ++ A QL   M     + N   YNI++    K
Sbjct: 102 MDEMRSRMIPPYFATSSFLAHELCLRGSMERAFQLLEIMP----VANSSAYNIVVVALCK 157

Query: 513 ARNYQSALKLYRDMQNAGF--------------------------------EPDKVTYSI 540
           A     AL+L R M                                     EP  VT ++
Sbjct: 158 AARVDDALELARTMSEKRIPLAAGSLDSVLVGLMDSGRIDEALQVYRENRREPCLVTLNV 217

Query: 541 VMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVR------------- 587
           ++E     G +D+A  +   M  +   PDE  Y  ++D   KAG V              
Sbjct: 218 LLEGFCSRGQVDKARELLRAMPDEECAPDEVSYCTVLDGLCKAGRVEEAVRLFGDRELPS 277

Query: 588 ----------------------------KAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVG 619
                                       +A + +E M +  + P+  +   L+    + G
Sbjct: 278 SSSSSSSPPSLRGYNIVILGLCQNDRIDEAVQMFEKMNERNVSPDSWSYGILIDGLAKAG 337

Query: 620 QLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
           +L+DA +L Q +L+ G+ PS   YT L+
Sbjct: 338 KLNDARNLFQKLLHSGVTPSTVAYTSLI 365



 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 41/172 (23%), Positives = 76/172 (44%), Gaps = 5/172 (2%)

Query: 460 GLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSA 519
           G+ P    ++ +I      G    A ++F  ++ +   P    YN++I   +K +  ++ 
Sbjct: 5   GIFPAPLLFTSVIQGWCNVGRTFEAVKIF-SLMEECHSPYPDVYNVLIDSLSKRQETEAV 63

Query: 520 LKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDL 579
            K+ + M + G  PD  T++ ++  L   G +DEAE V  EMR +   P       L   
Sbjct: 64  KKMVQVMVDRGCFPDSFTFTTILCGLCKAGKMDEAELVMDEMRSRMIPPYFATSSFLAHE 123

Query: 580 WGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGM 631
               G++ +A++  E M  A    N    N ++ A  +  ++ DA  L + M
Sbjct: 124 LCLRGSMERAFQLLEIMPVA----NSSAYNIVVVALCKAARVDDALELARTM 171


>gi|225451354|ref|XP_002275019.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 744

 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 93/303 (30%), Positives = 149/303 (49%), Gaps = 1/303 (0%)

Query: 341 TVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNR 400
           T A   F+ +  Q G   D  TYT++V  L    ++  +  LL+QMV     P+VV ++ 
Sbjct: 213 TEAFNLFSQMVGQ-GISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFST 271

Query: 401 LIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAG 460
           ++ +  +   + EA ++   M   G EPD VTY TL+D H     +D A+ ++  M   G
Sbjct: 272 VVDALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKG 331

Query: 461 LSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSAL 520
            +PD  +Y+ +IN   K   +  A  LF EM  +  IP+  TYN ++         Q A+
Sbjct: 332 FAPDVISYTTLINGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYNTLMHGLCHVGRLQDAI 391

Query: 521 KLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLW 580
            L+ +M   G  PD VTYSI+++ L    +L+EA A+   +   N  PD  VY +++D  
Sbjct: 392 ALFHEMVARGQMPDLVTYSILLDSLCKNCHLEEAMALLKAIEASNLNPDIQVYNIIIDGM 451

Query: 581 GKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSL 640
            +AG +  A + +  +   GL P+V T N ++    + G L++A  L   M      P  
Sbjct: 452 CRAGELEAARDLFSNLSSKGLHPSVWTYNIMIHGLCKRGLLNEANKLFMEMDGNDCSPDG 511

Query: 641 QTY 643
            TY
Sbjct: 512 CTY 514



 Score =  142 bits (357), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 89/323 (27%), Positives = 166/323 (51%), Gaps = 2/323 (0%)

Query: 359 DEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVF 418
           D   ++T+V  L +  +    ++++D M++ G +P+VVTY  L+  +   + ++EA+ VF
Sbjct: 265 DVVIFSTVVDALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVF 324

Query: 419 KQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKA 478
             M   G  PD ++Y TLI+ + K   +D AM ++++M      PDT TY+ +++ L   
Sbjct: 325 DMMVRKGFAPDVISYTTLINGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYNTLMHGLCHV 384

Query: 479 GHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTY 538
           G LQ A  LF EMV +G +P+LVTY+I++    K  + + A+ L + ++ +   PD   Y
Sbjct: 385 GRLQDAIALFHEMVARGQMPDLVTYSILLDSLCKNCHLEEAMALLKAIEASNLNPDIQVY 444

Query: 539 SIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQ 598
           +I+++ +   G L+ A  +F+ +  K   P    Y +++    K G + +A + +  M  
Sbjct: 445 NIIIDGMCRAGELEAARDLFSNLSSKGLHPSVWTYNIMIHGLCKRGLLNEANKLFMEMDG 504

Query: 599 AGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYD 658
               P+  T N++   FL+  +   A  LL+ ML  G    + T TLL+   ++     D
Sbjct: 505 NDCSPDGCTYNTIARGFLQNNETLRAIQLLEEMLARGFSADVSTTTLLVEMLSD--DGLD 562

Query: 659 MGFCHELMAVSGHPAHMFLLSMP 681
              C  +++V       + + +P
Sbjct: 563 QSSCFLMLSVLSEDDRRYFIFIP 585



 Score =  136 bits (342), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 81/296 (27%), Positives = 140/296 (47%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
            Q   + D   YT+++  L + RQ      L  QMV  G  P++ TY  L+H+       
Sbjct: 188 EQGNCQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQGISPDIFTYTSLVHALCNLCEW 247

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
                +  QM      PD V + T++D   K G +  A ++   M   G+ PD  TY+ +
Sbjct: 248 KHVTTLLNQMVNSKILPDVVIFSTVVDALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTL 307

Query: 472 INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF 531
           ++       +  A ++F  MV +G  P++++Y  +I    K      A+ L+ +M    +
Sbjct: 308 MDGHCLQSEMDEAVKVFDMMVRKGFAPDVISYTTLINGYCKIHKIDKAMYLFEEMCRKEW 367

Query: 532 EPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWE 591
            PD  TY+ +M  L H G L +A A+F EM  +  +PD   Y +L+D   K  ++ +A  
Sbjct: 368 IPDTKTYNTLMHGLCHVGRLQDAIALFHEMVARGQMPDLVTYSILLDSLCKNCHLEEAMA 427

Query: 592 WYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
             +A+  + L P++   N ++    R G+L  A  L   + + GL PS+ TY +++
Sbjct: 428 LLKAIEASNLNPDIQVYNIIIDGMCRAGELEAARDLFSNLSSKGLHPSVWTYNIMI 483



 Score =  134 bits (336), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 98/356 (27%), Positives = 152/356 (42%), Gaps = 40/356 (11%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           G   + +T   ++       + G    +L ++++ G QP+  T+  LI        + EA
Sbjct: 86  GVPPNVYTLNILINSFCHLNRVGFAFSVLAKILKLGHQPDPTTFTTLIRGLCVEGKIGEA 145

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
           L +F +M   G +P+ VTY TLI+   K G    A+ + + M+     PD   Y+ II+ 
Sbjct: 146 LHLFDKMIDEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDS 205

Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNA----- 529
           L K   +  A  LF +MV QG  P++ TY  ++        ++    L   M N+     
Sbjct: 206 LCKDRQVTEAFNLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPD 265

Query: 530 ------------------------------GFEPDKVTYSIVMEVLGHC--GYLDEAEAV 557
                                         G EPD VTY+ +M+  GHC    +DEA  V
Sbjct: 266 VVIFSTVVDALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMD--GHCLQSEMDEAVKV 323

Query: 558 FAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLR 617
           F  M RK + PD   Y  L++ + K   + KA   +E M +    P+  T N+L+     
Sbjct: 324 FDMMVRKGFAPDVISYTTLINGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYNTLMHGLCH 383

Query: 618 VGQLSDAYHLLQGMLNLGLKPSLQTYTLLL-SCCTEARSPYDMGFCHELMAVSGHP 672
           VG+L DA  L   M+  G  P L TY++LL S C        M     + A + +P
Sbjct: 384 VGRLQDAIALFHEMVARGQMPDLVTYSILLDSLCKNCHLEEAMALLKAIEASNLNP 439



 Score =  133 bits (334), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 79/286 (27%), Positives = 133/286 (46%)

Query: 363 YTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQ 422
           +  ++  + + + +  +  L  QM   G  PNV T N LI+S+   N +  A  V  ++ 
Sbjct: 59  FAKLLTSIAKMKHYSTVLSLSTQMDSFGVPPNVYTLNILINSFCHLNRVGFAFSVLAKIL 118

Query: 423 VVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQ 482
            +G +PD  T+ TLI      G +  A+ ++ KM   G  P+  TY  +IN L K G+  
Sbjct: 119 KLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEGFQPNVVTYGTLINGLCKVGNTS 178

Query: 483 AAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVM 542
           AA +L   M    C P++V Y  +I    K R    A  L+  M   G  PD  TY+ ++
Sbjct: 179 AAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQGISPDIFTYTSLV 238

Query: 543 EVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLR 602
             L +         +  +M     +PD  ++  +VD   K G V +A E  + M+Q G+ 
Sbjct: 239 HALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDALCKEGKVTEAHEIVDMMIQRGVE 298

Query: 603 PNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
           P+V T  +L+       ++ +A  +   M+  G  P + +YT L++
Sbjct: 299 PDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDVISYTTLIN 344



 Score =  108 bits (269), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 70/273 (25%), Positives = 131/273 (47%), Gaps = 6/273 (2%)

Query: 393 PNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDM 452
           P++V + +L+ S  +  + +  L +  QM   G  P+  T   LI+       +  A  +
Sbjct: 54  PSIVDFAKLLTSIAKMKHYSTVLSLSTQMDSFGVPPNVYTLNILINSFCHLNRVGFAFSV 113

Query: 453 YKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAK 512
             K+   G  PD  T++ +I  L   G +  A  LF +M+++G  PN+VTY  +I    K
Sbjct: 114 LAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEGFQPNVVTYGTLINGLCK 173

Query: 513 ARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPV 572
             N  +A++L R M+    +PD V Y+ +++ L     + EA  +F++M  +   PD   
Sbjct: 174 VGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQGISPDIFT 233

Query: 573 YGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGML 632
           Y  LV         +        M+ + + P+V   ++++ A  + G++++A+ ++  M+
Sbjct: 234 YTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDALCKEGKVTEAHEIVDMMI 293

Query: 633 NLGLKPSLQTYTLLL------SCCTEARSPYDM 659
             G++P + TYT L+      S   EA   +DM
Sbjct: 294 QRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDM 326



 Score = 86.7 bits (213), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 58/247 (23%), Positives = 112/247 (45%), Gaps = 1/247 (0%)

Query: 409 NYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTY 468
           N L++AL  F ++  +   P  V +  L+   AK       + +  +M + G+ P+ +T 
Sbjct: 35  NTLDDALSSFNRLLHMHPPPSIVDFAKLLTSIAKMKHYSTVLSLSTQMDSFGVPPNVYTL 94

Query: 469 SVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQN 528
           +++IN       +  A  +  +++  G  P+  T+  +I           AL L+  M +
Sbjct: 95  NILINSFCHLNRVGFAFSVLAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMID 154

Query: 529 AGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRK 588
            GF+P+ VTY  ++  L   G    A  +   M + N  PD  +Y  ++D   K   V +
Sbjct: 155 EGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTE 214

Query: 589 AWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTY-TLLL 647
           A+  +  M+  G+ P++ T  SL+ A   + +      LL  M+N  + P +  + T++ 
Sbjct: 215 AFNLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVD 274

Query: 648 SCCTEAR 654
           + C E +
Sbjct: 275 ALCKEGK 281


>gi|147768816|emb|CAN62673.1| hypothetical protein VITISV_031897 [Vitis vinifera]
          Length = 653

 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 89/289 (30%), Positives = 151/289 (52%)

Query: 359 DEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVF 418
           D  T  T+V  L +       + ++D M+  G +PNVVTYN L+  +   N ++ A+ VF
Sbjct: 279 DVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVF 338

Query: 419 KQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKA 478
             M    C  + ++Y TLI+ + K   +D AM ++++M    L+P+T TY+ +I+ L   
Sbjct: 339 DTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHV 398

Query: 479 GHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTY 538
           G LQ A  LF EMV +G IP+LVTY  +     K R+   A+ L + ++ + ++PD   Y
Sbjct: 399 GRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIY 458

Query: 539 SIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQ 598
           + +++ +   G L++A  +F+ +  K   P+   Y +++    K G + +A + +  M +
Sbjct: 459 TTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNK 518

Query: 599 AGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
            G  PN  T N +   FLR  +      LL+ ML  G    + T TLL+
Sbjct: 519 NGCSPNDCTYNLITRGFLRNNEALRTIELLEEMLARGFSVDVSTTTLLV 567



 Score =  139 bits (349), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 90/340 (26%), Positives = 159/340 (46%), Gaps = 36/340 (10%)

Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLI 402
           AL  F+ +  + GF+ +  TY T++  L +     A  +LL  M +  CQPNVV ++ LI
Sbjct: 159 ALHLFDKMIGE-GFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNVVVFSTLI 217

Query: 403 HSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLS 462
            S  +   + EA ++F +M   G  P+ VTY +LI    K         +  +M  + + 
Sbjct: 218 DSLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIM 277

Query: 463 PDTFTYSVIINCLGKAGHLQAAH-----------------------------------QL 487
           PD FT + +++ L K G +  AH                                   ++
Sbjct: 278 PDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKV 337

Query: 488 FCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGH 547
           F  MV++ C+ N+++YN +I    K ++   A+ L+ +M      P+ VTY+ ++  L H
Sbjct: 338 FDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCH 397

Query: 548 CGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPT 607
            G L +A ++F EM  +  +PD   Y  L D   K  ++ KA    +A+  +   P++  
Sbjct: 398 VGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQI 457

Query: 608 CNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
             ++L    R G+L DA  L   + + GL+P++ TY +++
Sbjct: 458 YTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMI 497



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 86/285 (30%), Positives = 139/285 (48%)

Query: 362 TYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQM 421
           TY +++  L +  ++  +  L+++MV     P+V T N ++ +  +   + EA DV   M
Sbjct: 247 TYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMM 306

Query: 422 QVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHL 481
              G EP+ VTY  L+D H     +DVA+ ++  M       +  +Y+ +IN   K   +
Sbjct: 307 IHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSV 366

Query: 482 QAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIV 541
             A  LF EM  Q   PN VTYN +I         Q A+ L+ +M   G  PD VTY  +
Sbjct: 367 DKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTL 426

Query: 542 MEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGL 601
            + L    +LD+A A+   +   NW PD  +Y  ++D   +AG +  A + +  +   GL
Sbjct: 427 SDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRAGELEDARDLFSNLSSKGL 486

Query: 602 RPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLL 646
           +PNV T N ++    + G L++A  L   M   G  P+  TY L+
Sbjct: 487 QPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCSPNDCTYNLI 531



 Score =  125 bits (313), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 95/337 (28%), Positives = 147/337 (43%), Gaps = 42/337 (12%)

Query: 350 LRRQA---GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYG 406
           L RQ    G   D +T   ++  L    +       L ++++ G QP+  T+  LI    
Sbjct: 92  LSRQMDSFGIPPDVYTLAIVINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLC 151

Query: 407 RANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTF 466
               + EAL +F +M   G +P+ VTY TLI+   K G    A+ + + M+     P+  
Sbjct: 152 VEGKIGEALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNVV 211

Query: 467 TYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDM 526
            +S +I+ L K   +  A  +F EM+ +G  PN+VTYN +I    K   ++    L  +M
Sbjct: 212 VFSTLIDSLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEM 271

Query: 527 QNA-----------------------------------GFEPDKVTYSIVMEVLGHC--G 549
            ++                                   G EP+ VTY+ +M+  GHC   
Sbjct: 272 VDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMD--GHCLRN 329

Query: 550 YLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCN 609
            +D A  VF  M  K+ V +   Y  L++ + K  +V KA   +E M +  L PN  T N
Sbjct: 330 EVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYN 389

Query: 610 SLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLL 646
           +L+     VG+L DA  L   M+  G  P L TY  L
Sbjct: 390 TLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTL 426



 Score =  116 bits (291), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 70/265 (26%), Positives = 131/265 (49%)

Query: 383 LDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAK 442
            ++M+     P+ V +NRL+ S  +  + +  L + +QM   G  PD  T   +I+    
Sbjct: 58  FNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVYTLAIVINSLCH 117

Query: 443 AGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVT 502
              +D A     K+   G  PD  T++ +I  L   G +  A  LF +M+ +G  PN+VT
Sbjct: 118 LNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEGFQPNVVT 177

Query: 503 YNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMR 562
           Y  +I    K  N  +A++L R M+    +P+ V +S +++ L     + EA  +F+EM 
Sbjct: 178 YGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNVVVFSTLIDSLCKDRQVTEAFNIFSEMI 237

Query: 563 RKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLS 622
            K   P+   Y  L+    K    +        M+ + + P+V T N+++ A  + G ++
Sbjct: 238 TKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDALCKEGMVA 297

Query: 623 DAYHLLQGMLNLGLKPSLQTYTLLL 647
           +A+ ++  M++ G++P++ TY  L+
Sbjct: 298 EAHDVVDMMIHRGVEPNVVTYNALM 322



 Score =  109 bits (272), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 92/412 (22%), Positives = 170/412 (41%), Gaps = 37/412 (8%)

Query: 370 LGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPD 429
           + + +    +  L  QM   G  P+V T   +I+S    N ++ A     ++  +G +PD
Sbjct: 80  IAKTKHHSTLLSLSRQMDSFGIPPDVYTLAIVINSLCHLNRVDFAFSALAKILKLGHQPD 139

Query: 430 RVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFC 489
             T+ TLI      G +  A+ ++ KM   G  P+  TY  +IN L K G+  AA +L  
Sbjct: 140 ATTFTTLIRGLCVEGKIGEALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTSAAIRLLR 199

Query: 490 EMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCG 549
            M    C PN+V ++ +I    K R    A  ++ +M   G  P+ VTY+ ++  L    
Sbjct: 200 SMEQGNCQPNVVVFSTLIDSLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLC 259

Query: 550 YLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPT-- 607
                  +  EM     +PD      +VD   K G V +A +  + M+  G+ PNV T  
Sbjct: 260 EWKHVTTLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYN 319

Query: 608 ------C---------------------------NSLLSAFLRVGQLSDAYHLLQGMLNL 634
                 C                           N+L++ + ++  +  A +L + M   
Sbjct: 320 ALMDGHCLRNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQ 379

Query: 635 GLKPSLQTY-TLLLSCCTEARSPYDMGFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDH 693
            L P+  TY TL+   C   R    +   HE++A    P  +   ++       +++ D 
Sbjct: 380 ELTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHL-DK 438

Query: 694 VGSFLEMMHSEDRESKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDA 745
             + L+ +   + +    +   ++D + ++G  E+A  ++   + K + P+ 
Sbjct: 439 AMALLKAIEGSNWDPDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQPNV 490



 Score = 95.1 bits (235), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 66/220 (30%), Positives = 115/220 (52%), Gaps = 4/220 (1%)

Query: 336 QLQDHTVALGFFNWLRRQAGFKHDEHTYTTMV-GILGRARQFGAINKLLDQMVRDGCQPN 394
           ++Q    A+  F  + RQ     +  TY T++ G+    R   AI+ L  +MV  G  P+
Sbjct: 362 KIQSVDKAMYLFEEMSRQE-LTPNTVTYNTLIHGLCHVGRLQDAIS-LFHEMVARGQIPD 419

Query: 395 VVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYK 454
           +VTY  L     +  +L++A+ + K ++    +PD   Y T++D   +AG L+ A D++ 
Sbjct: 420 LVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRAGELEDARDLFS 479

Query: 455 KMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKAR 514
            + + GL P+ +TY+++I+ L K G L  A +LF EM   GC PN  TYN++     +  
Sbjct: 480 NLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCSPNDCTYNLITRGFLRNN 539

Query: 515 NYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEA 554
                ++L  +M   GF  D  T ++++ +L   G LD++
Sbjct: 540 EALRTIELLEEMLARGFSVDVSTTTLLVGMLSDDG-LDQS 578



 Score = 83.6 bits (205), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 64/266 (24%), Positives = 116/266 (43%)

Query: 481 LQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSI 540
           L  A   F  M+++   P+ V +N ++   AK +++ + L L R M + G  PD  T +I
Sbjct: 51  LDEALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVYTLAI 110

Query: 541 VMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAG 600
           V+  L H   +D A +  A++ +    PD   +  L+      G + +A   ++ M+  G
Sbjct: 111 VINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEG 170

Query: 601 LRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMG 660
            +PNV T  +L++   +VG  S A  LL+ M     +P++  ++ L+    + R   +  
Sbjct: 171 FQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNVVVFSTLIDSLCKDRQVTEAF 230

Query: 661 FCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRESKRGLVDAVVDFL 720
                M   G   ++   +    G        HV + +  M           ++ VVD L
Sbjct: 231 NIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDAL 290

Query: 721 HKSGLKEEAGSVWEVAAQKNVYPDAV 746
            K G+  EA  V ++   + V P+ V
Sbjct: 291 CKEGMVAEAHDVVDMMIHRGVEPNVV 316


>gi|449458524|ref|XP_004146997.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Cucumis sativus]
          Length = 481

 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 98/307 (31%), Positives = 155/307 (50%), Gaps = 11/307 (3%)

Query: 350 LRRQAGFKHDEHTYTTMV-GILGRAR--QFGAINKLLDQMVRDGCQPNVVTYNRLIHSYG 406
           LRR  G+  D  TY T++ G+ G  +        ++ ++M   G  PNV++Y+ L+H + 
Sbjct: 152 LRR--GYIPDIVTYNTLIKGLYGLCKVGHEDEAKEIFEEMKAQGMIPNVISYSSLVHGFC 209

Query: 407 RANYLNEALDVFKQMQVVGCEPDRVTYCTLIDI---HAKAGFLDVAMDMYKKMQAAGLSP 463
            A  L E+  +F +M   G +P+ V +  LIDI     K G L  A  ++  M + G   
Sbjct: 210 CAGKLEESKRLFNEMVDQGVQPNLVQFNVLIDILCKEGKIGDLSSARKLFLSMPSKGCEH 269

Query: 464 DTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLY 523
           +  +Y+++IN   K   ++ A  L+ EM   G  PN+ TY+ ++    +      A KL+
Sbjct: 270 NEISYTILINGYCKIWKVEEAMNLYNEMPQVGKRPNVKTYSTLLTGLLQTGKVGDANKLF 329

Query: 524 RDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKA 583
             M+ +G   D   Y I ++ L   G L EA  +F E++  N+  D   Y  L+D   KA
Sbjct: 330 GVMKASGISVDSCIYVIFLDGLCKNGVLFEAMELFNELKSYNFKLDFESYSRLIDGLCKA 389

Query: 584 GNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNL---GLKPSL 640
           G V  AWE+++ + Q GL+PNV TCN ++  F RV Q+  A  L + M  +   G  P +
Sbjct: 390 GKVEIAWEFFKQLSQEGLQPNVVTCNIMIHGFCRVEQVDKANILFEKMEKMEENGCTPDI 449

Query: 641 QTYTLLL 647
            TY  LL
Sbjct: 450 ITYNTLL 456



 Score =  119 bits (299), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 74/272 (27%), Positives = 132/272 (48%), Gaps = 6/272 (2%)

Query: 382 LLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHA 441
             D M+R    P + ++NRL+    + N+ ++   ++ +M++ G  PD  T   L +   
Sbjct: 77  FFDLMMRSHPIPPISSFNRLLGGLAKINHYSQLFSLYNKMRLAGLSPDLFTLNILANCLC 136

Query: 442 KAGFLDVAMDMYKKMQAAGLSPDTFTYSVIIN---CLGKAGHLQAAHQLFCEMVNQGCIP 498
               +   +     +   G  PD  TY+ +I     L K GH   A ++F EM  QG IP
Sbjct: 137 NLNRVSEGLAAMTGILRRGYIPDIVTYNTLIKGLYGLCKVGHEDEAKEIFEEMKAQGMIP 196

Query: 499 NLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVL---GHCGYLDEAE 555
           N+++Y+ ++     A   + + +L+ +M + G +P+ V +++++++L   G  G L  A 
Sbjct: 197 NVISYSSLVHGFCCAGKLEESKRLFNEMVDQGVQPNLVQFNVLIDILCKEGKIGDLSSAR 256

Query: 556 AVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAF 615
            +F  M  K    +E  Y +L++ + K   V +A   Y  M Q G RPNV T ++LL+  
Sbjct: 257 KLFLSMPSKGCEHNEISYTILINGYCKIWKVEEAMNLYNEMPQVGKRPNVKTYSTLLTGL 316

Query: 616 LRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
           L+ G++ DA  L   M   G+      Y + L
Sbjct: 317 LQTGKVGDANKLFGVMKASGISVDSCIYVIFL 348



 Score = 84.7 bits (208), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 64/220 (29%), Positives = 102/220 (46%), Gaps = 16/220 (7%)

Query: 469 SVIINC-LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQ 527
           S + NC  G    +QA H  F  M+    IP + ++N ++   AK  +Y     LY  M+
Sbjct: 59  SFLRNCKTGNIDVIQAFH-FFDLMMRSHPIPPISSFNRLLGGLAKINHYSQLFSLYNKMR 117

Query: 528 NAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVD-LWG--KAG 584
            AG  PD  T +I+   L +   + E  A    + R+ ++PD   Y  L+  L+G  K G
Sbjct: 118 LAGLSPDLFTLNILANCLCNLNRVSEGLAAMTGILRRGYIPDIVTYNTLIKGLYGLCKVG 177

Query: 585 NVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYT 644
           +  +A E +E M   G+ PNV + +SL+  F   G+L ++  L   M++ G++P+L  + 
Sbjct: 178 HEDEAKEIFEEMKAQGMIPNVISYSSLVHGFCCAGKLEESKRLFNEMVDQGVQPNLVQFN 237

Query: 645 LLLSCCTEARSPYDMGFCHELMAVSGHPAHMFLLSMPSPG 684
           +L+              C E        A    LSMPS G
Sbjct: 238 VLIDI-----------LCKEGKIGDLSSARKLFLSMPSKG 266



 Score = 76.3 bits (186), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 57/217 (26%), Positives = 102/217 (47%), Gaps = 8/217 (3%)

Query: 440 HAKAGFLDV--AMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCI 497
           + K G +DV  A   +  M  +   P   +++ ++  L K  H      L+ +M   G  
Sbjct: 63  NCKTGNIDVIQAFHFFDLMMRSHPIPPISSFNRLLGGLAKINHYSQLFSLYNKMRLAGLS 122

Query: 498 PNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVL-GHC--GYLDEA 554
           P+L T NI+             L     +   G+ PD VTY+ +++ L G C  G+ DEA
Sbjct: 123 PDLFTLNILANCLCNLNRVSEGLAAMTGILRRGYIPDIVTYNTLIKGLYGLCKVGHEDEA 182

Query: 555 EAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSA 614
           + +F EM+ +  +P+   Y  LV  +  AG + ++   +  M+  G++PN+   N L+  
Sbjct: 183 KEIFEEMKAQGMIPNVISYSSLVHGFCCAGKLEESKRLFNEMVDQGVQPNLVQFNVLIDI 242

Query: 615 FL---RVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
                ++G LS A  L   M + G + +  +YT+L++
Sbjct: 243 LCKEGKIGDLSSARKLFLSMPSKGCEHNEISYTILIN 279


>gi|302806388|ref|XP_002984944.1| hypothetical protein SELMODRAFT_121294 [Selaginella moellendorffii]
 gi|300147530|gb|EFJ14194.1| hypothetical protein SELMODRAFT_121294 [Selaginella moellendorffii]
          Length = 468

 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 87/289 (30%), Positives = 153/289 (52%), Gaps = 3/289 (1%)

Query: 363 YTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQ 422
           Y  +V  L +A       ++ + M  + C P++VTYN LI+S   A    +ALD+F+ M+
Sbjct: 13  YDFVVQSLAKAGMLAQALEVFETMKSESCVPSLVTYNVLINSRCNAGEFGKALDLFQSMK 72

Query: 423 VVG-CEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHL 481
                EPDR TY TLI     +G  + A  +  +M+   ++ + FTYS II  L K    
Sbjct: 73  REKRVEPDRWTYNTLISGLCSSGNTEGARKLLSEMRDKNIAANVFTYSSIIKSLVKEAKP 132

Query: 482 QAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIV 541
           + ++++  EM+  GC P++  +N ++   A++ N + A ++Y+ M  +G++PD V+Y I+
Sbjct: 133 EESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNNMEKAREVYQHMVESGYKPDNVSYHIL 192

Query: 542 MEVLGHCGYLDEAEAVFAE--MRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQA 599
           +  L   G LDE+  + +E  MR   +VP+   +  L+    + G + KA E + +ML+A
Sbjct: 193 IHGLAKIGKLDESLKILSEMAMRAAGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLEA 252

Query: 600 GLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
           G +PN  T  +L++   R  ++  A  L + M    + P    Y  L++
Sbjct: 253 GCKPNKYTYTTLIAGLCRAEKVIQARELFEKMTQACIPPDAVAYNSLIA 301



 Score =  142 bits (357), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 86/309 (27%), Positives = 157/309 (50%), Gaps = 3/309 (0%)

Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLI 402
           AL  F  ++R+   + D  TY T++  L  +       KLL +M       NV TY+ +I
Sbjct: 64  ALDLFQSMKREKRVEPDRWTYNTLISGLCSSGNTEGARKLLSEMRDKNIAANVFTYSSII 123

Query: 403 HSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLS 462
            S  +     E+  V ++M   GC PD   +  ++   A++  ++ A ++Y+ M  +G  
Sbjct: 124 KSLVKEAKPEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNNMEKAREVYQHMVESGYK 183

Query: 463 PDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQ--GCIPNLVTYNIMIALQAKARNYQSAL 520
           PD  +Y ++I+ L K G L  + ++  EM  +  G +PN++T++ +I    +    + AL
Sbjct: 184 PDNVSYHILIHGLAKIGKLDESLKILSEMAMRAAGYVPNVITFSTLIHGLCRTGELEKAL 243

Query: 521 KLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLW 580
           +++  M  AG +P+K TY+ ++  L     + +A  +F +M +    PD   Y  L+  +
Sbjct: 244 EVFGSMLEAGCKPNKYTYTTLIAGLCRAEKVIQARELFEKMTQACIPPDAVAYNSLIAGY 303

Query: 581 GKAGNVRKAWEWYEAML-QAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPS 639
            K G++ +A + Y  M   AGL+P + T N+L+  F ++G+L  A  L+  M   GL   
Sbjct: 304 CKRGSMDEAEKLYREMSGGAGLQPTIVTFNTLIDGFCKLGKLGRANELVAEMGTKGLAAD 363

Query: 640 LQTYTLLLS 648
             TY +L++
Sbjct: 364 TCTYRILIA 372



 Score =  137 bits (346), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 87/280 (31%), Positives = 142/280 (50%), Gaps = 3/280 (1%)

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRD--GCQPNVVTYNRLIHSYGRANY 410
           ++G+K D  +Y  ++  L +  +     K+L +M     G  PNV+T++ LIH   R   
Sbjct: 179 ESGYKPDNVSYHILIHGLAKIGKLDESLKILSEMAMRAAGYVPNVITFSTLIHGLCRTGE 238

Query: 411 LNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSV 470
           L +AL+VF  M   GC+P++ TY TLI    +A  +  A ++++KM  A + PD   Y+ 
Sbjct: 239 LEKALEVFGSMLEAGCKPNKYTYTTLIAGLCRAEKVIQARELFEKMTQACIPPDAVAYNS 298

Query: 471 IINCLGKAGHLQAAHQLFCEMVN-QGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNA 529
           +I    K G +  A +L+ EM    G  P +VT+N +I    K      A +L  +M   
Sbjct: 299 LIAGYCKRGSMDEAEKLYREMSGGAGLQPTIVTFNTLIDGFCKLGKLGRANELVAEMGTK 358

Query: 530 GFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKA 589
           G   D  TY I++  L     LDEA  V+ +MR K ++ D       V    K GN+ +A
Sbjct: 359 GLAADTCTYRILIAGLSRATKLDEALEVYKQMREKKFLLDPVSCVSFVGGLCKTGNIDQA 418

Query: 590 WEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQ 629
           +  +EA  ++G  PN  T   L  + +++G++ DA  L++
Sbjct: 419 YAVFEATRKSGAVPNPETFRILSESLIKLGRVEDAQKLME 458



 Score =  136 bits (343), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 95/355 (26%), Positives = 167/355 (47%), Gaps = 52/355 (14%)

Query: 330 ANQVLKQLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRD 389
           A ++L +++D  +A   F              TY++++  L +  +     K+L++M+  
Sbjct: 100 ARKLLSEMRDKNIAANVF--------------TYSSIIKSLVKEAKPEESYKVLEEMMAA 145

Query: 390 GCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVA 449
           GC P+V  +N ++  + R+N + +A +V++ M   G +PD V+Y  LI   AK G LD +
Sbjct: 146 GCNPDVFAFNGVMQGFARSNNMEKAREVYQHMVESGYKPDNVSYHILIHGLAKIGKLDES 205

Query: 450 MDMYKKM--QAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMI 507
           + +  +M  +AAG  P+  T+S +I+ L + G L+ A ++F  M+  GC PN  TY  +I
Sbjct: 206 LKILSEMAMRAAGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLEAGCKPNKYTYTTLI 265

Query: 508 A--------LQAK--------------ARNYQS-------------ALKLYRDMQN-AGF 531
           A        +QA+              A  Y S             A KLYR+M   AG 
Sbjct: 266 AGLCRAEKVIQARELFEKMTQACIPPDAVAYNSLIAGYCKRGSMDEAEKLYREMSGGAGL 325

Query: 532 EPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWE 591
           +P  VT++ +++     G L  A  + AEM  K    D   Y +L+    +A  + +A E
Sbjct: 326 QPTIVTFNTLIDGFCKLGKLGRANELVAEMGTKGLAADTCTYRILIAGLSRATKLDEALE 385

Query: 592 WYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLL 646
            Y+ M +     +  +C S +    + G +  AY + +     G  P+ +T+ +L
Sbjct: 386 VYKQMREKKFLLDPVSCVSFVGGLCKTGNIDQAYAVFEATRKSGAVPNPETFRIL 440



 Score =  122 bits (306), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 80/246 (32%), Positives = 126/246 (51%), Gaps = 5/246 (2%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           R AG+  +  T++T++  L R  +     ++   M+  GC+PN  TY  LI    RA  +
Sbjct: 215 RAAGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLEAGCKPNKYTYTTLIAGLCRAEKV 274

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQA-AGLSPDTFTYSV 470
            +A ++F++M      PD V Y +LI  + K G +D A  +Y++M   AGL P   T++ 
Sbjct: 275 IQARELFEKMTQACIPPDAVAYNSLIAGYCKRGSMDEAEKLYREMSGGAGLQPTIVTFNT 334

Query: 471 IINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAG 530
           +I+   K G L  A++L  EM  +G   +  TY I+IA  ++A     AL++Y+ M+   
Sbjct: 335 LIDGFCKLGKLGRANELVAEMGTKGLAADTCTYRILIAGLSRATKLDEALEVYKQMREKK 394

Query: 531 FEPDKVTYSIVMEVLGHC--GYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRK 588
           F  D V  S V  V G C  G +D+A AVF   R+   VP+   + +L +   K G V  
Sbjct: 395 FLLDPV--SCVSFVGGLCKTGNIDQAYAVFEATRKSGAVPNPETFRILSESLIKLGRVED 452

Query: 589 AWEWYE 594
           A +  E
Sbjct: 453 AQKLME 458



 Score = 52.0 bits (123), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 37/137 (27%), Positives = 65/137 (47%), Gaps = 2/137 (1%)

Query: 538 YSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAM- 596
           Y  V++ L   G L +A  VF  M+ ++ VP    Y +L++    AG   KA + +++M 
Sbjct: 13  YDFVVQSLAKAGMLAQALEVFETMKSESCVPSLVTYNVLINSRCNAGEFGKALDLFQSMK 72

Query: 597 LQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTY-TLLLSCCTEARS 655
            +  + P+  T N+L+S     G    A  LL  M +  +  ++ TY +++ S   EA+ 
Sbjct: 73  REKRVEPDRWTYNTLISGLCSSGNTEGARKLLSEMRDKNIAANVFTYSSIIKSLVKEAKP 132

Query: 656 PYDMGFCHELMAVSGHP 672
                   E+MA   +P
Sbjct: 133 EESYKVLEEMMAAGCNP 149


>gi|226493231|ref|NP_001140656.1| hypothetical protein [Zea mays]
 gi|194700420|gb|ACF84294.1| unknown [Zea mays]
 gi|414587025|tpg|DAA37596.1| TPA: hypothetical protein ZEAMMB73_567962 [Zea mays]
          Length = 598

 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 84/290 (28%), Positives = 141/290 (48%), Gaps = 35/290 (12%)

Query: 382 LLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHA 441
           +LD M+  GC P+VVTYN L+ +  +     +AL++   M+  GCEP+ VTY  +ID   
Sbjct: 185 VLDGMLCRGCAPDVVTYNILLQAACKGRGYRQALELIDFMRAEGCEPNNVTYNVIIDAMC 244

Query: 442 KAGFLDVAMDMYKKMQAAGLSPDTFTYS-------------------------------- 469
           + G +D A ++   + + G  P+T  Y+                                
Sbjct: 245 REGDVDQARELLNSLPSRGCKPNTVNYNTVLKGFCSIERWVDADEILDEMVRENCPPNEA 304

Query: 470 ---VIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDM 526
              VIIN L + G LQ       +M   GC  N+VTYN +I+   +  N  SAL+L  +M
Sbjct: 305 TLNVIINTLCRKGLLQKVTLYLEKMSKHGCTANVVTYNAVISGMCEQGNVDSALELLSNM 364

Query: 527 QNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNV 586
           Q+ G +PD VTY+ V++ L      ++AE +  +M + + +PD   +  ++  W + G +
Sbjct: 365 QSFGCKPDIVTYNTVLKGLCSADRWEDAEELMIKMSQNDRLPDNSTFNTIISFWCQKGLI 424

Query: 587 RKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGL 636
            +A+E ++ M + G  PN  T ++++    + G++  A  LL  M N G 
Sbjct: 425 LQAFEVFKQMPEKGCNPNSTTYSTIIGGLTKAGKMEQALELLNEMANKGF 474



 Score =  114 bits (286), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 75/332 (22%), Positives = 150/332 (45%), Gaps = 5/332 (1%)

Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLI 402
           AL   +++R + G + +  TY  ++  + R        +LL+ +   GC+PN V YN ++
Sbjct: 217 ALELIDFMRAE-GCEPNNVTYNVIIDAMCREGDVDQARELLNSLPSRGCKPNTVNYNTVL 275

Query: 403 HSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLS 462
             +       +A ++  +M    C P+  T   +I+   + G L       +KM   G +
Sbjct: 276 KGFCSIERWVDADEILDEMVRENCPPNEATLNVIINTLCRKGLLQKVTLYLEKMSKHGCT 335

Query: 463 PDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKL 522
            +  TY+ +I+ + + G++ +A +L   M + GC P++VTYN ++     A  ++ A +L
Sbjct: 336 ANVVTYNAVISGMCEQGNVDSALELLSNMQSFGCKPDIVTYNTVLKGLCSADRWEDAEEL 395

Query: 523 YRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGK 582
              M      PD  T++ ++      G + +A  VF +M  K   P+   Y  ++    K
Sbjct: 396 MIKMSQNDRLPDNSTFNTIISFWCQKGLILQAFEVFKQMPEKGCNPNSTTYSTIIGGLTK 455

Query: 583 AGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFL-RVGQLSDAYHLLQGMLNLGLKPSLQ 641
           AG + +A E    M   G   N      +L+  L +  ++ +   ++  + + G+ P   
Sbjct: 456 AGKMEQALELLNEMANKGF--NTDKMYRVLTESLNKEDKIEEVVQVVHKLQDSGISPQTV 513

Query: 642 TY-TLLLSCCTEARSPYDMGFCHELMAVSGHP 672
            Y T+LL  C   ++ Y +    ++++    P
Sbjct: 514 LYNTVLLGLCRNGKTDYAIDVLADMVSCGCMP 545



 Score =  114 bits (286), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 76/270 (28%), Positives = 125/270 (46%), Gaps = 1/270 (0%)

Query: 359 DEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVF 418
           +E T   ++  L R      +   L++M + GC  NVVTYN +I        ++ AL++ 
Sbjct: 302 NEATLNVIINTLCRKGLLQKVTLYLEKMSKHGCTANVVTYNAVISGMCEQGNVDSALELL 361

Query: 419 KQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKA 478
             MQ  GC+PD VTY T++     A   + A ++  KM      PD  T++ II+   + 
Sbjct: 362 SNMQSFGCKPDIVTYNTVLKGLCSADRWEDAEELMIKMSQNDRLPDNSTFNTIISFWCQK 421

Query: 479 GHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTY 538
           G +  A ++F +M  +GC PN  TY+ +I    KA   + AL+L  +M N GF  DK+ Y
Sbjct: 422 GLILQAFEVFKQMPEKGCNPNSTTYSTIIGGLTKAGKMEQALELLNEMANKGFNTDKM-Y 480

Query: 539 SIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQ 598
            ++ E L     ++E   V  +++     P   +Y  ++    + G    A +    M+ 
Sbjct: 481 RVLTESLNKEDKIEEVVQVVHKLQDSGISPQTVLYNTVLLGLCRNGKTDYAIDVLADMVS 540

Query: 599 AGLRPNVPTCNSLLSAFLRVGQLSDAYHLL 628
            G  P+  T   L+      G   +A  LL
Sbjct: 541 CGCMPDESTYIILIEGLFYEGYSKEARELL 570



 Score =  114 bits (285), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 78/298 (26%), Positives = 136/298 (45%), Gaps = 39/298 (13%)

Query: 393 PNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDM 452
           P+V   NRL+    R        D  + ++  G E    TY  L+D + +AG L+ A  +
Sbjct: 94  PDVPLANRLVRDLCRRG---RPADAARVVEACGPEATAATYGALVDGYCRAGLLEDARRV 150

Query: 453 YKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAK 512
              M A   +   + ++ +I+ L + G +  A  +   M+ +GC P++VTYNI++    K
Sbjct: 151 VGGMPAHVQASSAYAHNPLIHALCERGRVADALVVLDGMLCRGCAPDVVTYNILLQAACK 210

Query: 513 ARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDE------------------- 553
            R Y+ AL+L   M+  G EP+ VTY+++++ +   G +D+                   
Sbjct: 211 GRGYRQALELIDFMRAEGCEPNNVTYNVIIDAMCREGDVDQARELLNSLPSRGCKPNTVN 270

Query: 554 ----------------AEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAML 597
                           A+ +  EM R+N  P+E    ++++   + G ++K   + E M 
Sbjct: 271 YNTVLKGFCSIERWVDADEILDEMVRENCPPNEATLNVIINTLCRKGLLQKVTLYLEKMS 330

Query: 598 QAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTY-TLLLSCCTEAR 654
           + G   NV T N+++S     G +  A  LL  M + G KP + TY T+L   C+  R
Sbjct: 331 KHGCTANVVTYNAVISGMCEQGNVDSALELLSNMQSFGCKPDIVTYNTVLKGLCSADR 388



 Score =  103 bits (258), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 64/251 (25%), Positives = 112/251 (44%)

Query: 398 YNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQ 457
           +N LIH+      + +AL V   M   GC PD VTY  L+    K      A+++   M+
Sbjct: 166 HNPLIHALCERGRVADALVVLDGMLCRGCAPDVVTYNILLQAACKGRGYRQALELIDFMR 225

Query: 458 AAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQ 517
           A G  P+  TY+VII+ + + G +  A +L   + ++GC PN V YN ++        + 
Sbjct: 226 AEGCEPNNVTYNVIIDAMCREGDVDQARELLNSLPSRGCKPNTVNYNTVLKGFCSIERWV 285

Query: 518 SALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLV 577
            A ++  +M      P++ T ++++  L   G L +      +M +     +   Y  ++
Sbjct: 286 DADEILDEMVRENCPPNEATLNVIINTLCRKGLLQKVTLYLEKMSKHGCTANVVTYNAVI 345

Query: 578 DLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLK 637
               + GNV  A E    M   G +P++ T N++L       +  DA  L+  M      
Sbjct: 346 SGMCEQGNVDSALELLSNMQSFGCKPDIVTYNTVLKGLCSADRWEDAEELMIKMSQNDRL 405

Query: 638 PSLQTYTLLLS 648
           P   T+  ++S
Sbjct: 406 PDNSTFNTIIS 416



 Score = 94.0 bits (232), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 59/207 (28%), Positives = 105/207 (50%), Gaps = 1/207 (0%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           G K D  TY T++  L  A ++    +L+ +M ++   P+  T+N +I  + +   + +A
Sbjct: 368 GCKPDIVTYNTVLKGLCSADRWEDAEELMIKMSQNDRLPDNSTFNTIISFWCQKGLILQA 427

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
            +VFKQM   GC P+  TY T+I    KAG ++ A+++  +M   G + D   Y V+   
Sbjct: 428 FEVFKQMPEKGCNPNSTTYSTIIGGLTKAGKMEQALELLNEMANKGFNTDKM-YRVLTES 486

Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPD 534
           L K   ++   Q+  ++ + G  P  V YN ++    +      A+ +  DM + G  PD
Sbjct: 487 LNKEDKIEEVVQVVHKLQDSGISPQTVLYNTVLLGLCRNGKTDYAIDVLADMVSCGCMPD 546

Query: 535 KVTYSIVMEVLGHCGYLDEAEAVFAEM 561
           + TY I++E L + GY  EA  + + +
Sbjct: 547 ESTYIILIEGLFYEGYSKEARELLSRL 573



 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 41/163 (25%), Positives = 77/163 (47%), Gaps = 1/163 (0%)

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
           + G   +  TY+T++G L +A +     +LL++M   G   + + Y  L  S  + + + 
Sbjct: 436 EKGCNPNSTTYSTIIGGLTKAGKMEQALELLNEMANKGFNTDKM-YRVLTESLNKEDKIE 494

Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
           E + V  ++Q  G  P  V Y T++    + G  D A+D+   M + G  PD  TY ++I
Sbjct: 495 EVVQVVHKLQDSGISPQTVLYNTVLLGLCRNGKTDYAIDVLADMVSCGCMPDESTYIILI 554

Query: 473 NCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARN 515
             L   G+ + A +L   + ++  + N +  N  + L    R+
Sbjct: 555 EGLFYEGYSKEARELLSRLCSRDVLSNSLIKNEALLLDQNIRS 597


>gi|449479180|ref|XP_004155527.1| PREDICTED: pentatricopeptide repeat-containing protein At1g03560,
           mitochondrial-like [Cucumis sativus]
          Length = 653

 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 88/300 (29%), Positives = 149/300 (49%), Gaps = 1/300 (0%)

Query: 349 WLR-RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGR 407
           W R ++ G     +TY  +V  L  +    +  K+ + M      P+ VTYN +I  Y +
Sbjct: 208 WRRMKENGIDPSLYTYNFLVNGLVNSMFIESAEKVFEVMDGGKIVPDTVTYNIMIKGYCK 267

Query: 408 ANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFT 467
           A  L +A++ F+ M++   +PD++TY TLI         D  + +Y +M+  GL     +
Sbjct: 268 AGKLQKAMEKFRDMEMKNVKPDKITYMTLIQACYSERDFDTCLSLYLEMEERGLEIPPHS 327

Query: 468 YSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQ 527
           YS++I  L K      A+ +F  M  +GC  N+  Y  +I   +K  + + A++L+  M+
Sbjct: 328 YSLVIGGLCKQRKCMEAYAVFETMNQKGCRANVAIYTALIDSYSKNGSMEEAMRLFERMK 387

Query: 528 NAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVR 587
           N GFEPD VTYS+++  L   G LD+   +F   R K    +   Y  L+D  GKAG + 
Sbjct: 388 NEGFEPDAVTYSVLVNGLCKSGRLDDGMELFDFCRNKGVAINAMFYASLIDGLGKAGRIE 447

Query: 588 KAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
            A   +E M + G   +    N+++ A  + G++  A  L   M   G   ++ T+T+L+
Sbjct: 448 DAENLFEEMSEKGCARDSYCYNAIIDALAKHGKIDQALALFGRMEEEGCDQTVYTFTILI 507



 Score =  137 bits (344), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 101/414 (24%), Positives = 177/414 (42%)

Query: 342 VALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRL 401
           VA+ FF W  +Q  + H    + +++ +L  +     I  +  ++   G        N L
Sbjct: 132 VAVRFFFWAGKQKKYVHKIECHVSLIELLTFSADLVKIRLVFFELKDRGLLMTESAANSL 191

Query: 402 IHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGL 461
           I S+G    + E L V+++M+  G +P   TY  L++    + F++ A  +++ M    +
Sbjct: 192 IKSFGNLGLVEELLWVWRRMKENGIDPSLYTYNFLVNGLVNSMFIESAEKVFEVMDGGKI 251

Query: 462 SPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALK 521
            PDT TY+++I    KAG LQ A + F +M  +   P+ +TY  +I      R++ + L 
Sbjct: 252 VPDTVTYNIMIKGYCKAGKLQKAMEKFRDMEMKNVKPDKITYMTLIQACYSERDFDTCLS 311

Query: 522 LYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWG 581
           LY +M+  G E    +YS+V+  L       EA AVF  M +K    +  +Y  L+D + 
Sbjct: 312 LYLEMEERGLEIPPHSYSLVIGGLCKQRKCMEAYAVFETMNQKGCRANVAIYTALIDSYS 371

Query: 582 KAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQ 641
           K G++ +A   +E M   G  P+  T + L++   + G+L D   L     N G+  +  
Sbjct: 372 KNGSMEEAMRLFERMKNEGFEPDAVTYSVLVNGLCKSGRLDDGMELFDFCRNKGVAINAM 431

Query: 642 TYTLLLSCCTEARSPYDMGFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMM 701
            Y  L+    +A    D     E M+  G     +  +            D   +    M
Sbjct: 432 FYASLIDGLGKAGRIEDAENLFEEMSEKGCARDSYCYNAIIDALAKHGKIDQALALFGRM 491

Query: 702 HSEDRESKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAVKEKGMSYWL 755
             E  +        ++D L K    EEA   W+    K + P     + ++  L
Sbjct: 492 EEEGCDQTVYTFTILIDGLFKEHKNEEAIKFWDKMIDKGITPTVASFRALAIGL 545



 Score =  122 bits (306), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 78/298 (26%), Positives = 138/298 (46%)

Query: 357 KHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALD 416
           K D+ TY T++      R F     L  +M   G +    +Y+ +I    +     EA  
Sbjct: 287 KPDKITYMTLIQACYSERDFDTCLSLYLEMEERGLEIPPHSYSLVIGGLCKQRKCMEAYA 346

Query: 417 VFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLG 476
           VF+ M   GC  +   Y  LID ++K G ++ AM ++++M+  G  PD  TYSV++N L 
Sbjct: 347 VFETMNQKGCRANVAIYTALIDSYSKNGSMEEAMRLFERMKNEGFEPDAVTYSVLVNGLC 406

Query: 477 KAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKV 536
           K+G L    +LF    N+G   N + Y  +I    KA   + A  L+ +M   G   D  
Sbjct: 407 KSGRLDDGMELFDFCRNKGVAINAMFYASLIDGLGKAGRIEDAENLFEEMSEKGCARDSY 466

Query: 537 TYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAM 596
            Y+ +++ L   G +D+A A+F  M  +        + +L+D   K     +A ++++ M
Sbjct: 467 CYNAIIDALAKHGKIDQALALFGRMEEEGCDQTVYTFTILIDGLFKEHKNEEAIKFWDKM 526

Query: 597 LQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEAR 654
           +  G+ P V +  +L       G+++ A  +L  +  +G+ P      ++ + C   R
Sbjct: 527 IDKGITPTVASFRALAIGLCLCGKVARACKILDDLAPMGIIPETAFEDMINTLCKAQR 584



 Score =  120 bits (300), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 79/301 (26%), Positives = 149/301 (49%), Gaps = 1/301 (0%)

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
           + G +   H+Y+ ++G L + R+      + + M + GC+ NV  Y  LI SY +   + 
Sbjct: 318 ERGLEIPPHSYSLVIGGLCKQRKCMEAYAVFETMNQKGCRANVAIYTALIDSYSKNGSME 377

Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
           EA+ +F++M+  G EPD VTY  L++   K+G LD  M+++   +  G++ +   Y+ +I
Sbjct: 378 EAMRLFERMKNEGFEPDAVTYSVLVNGLCKSGRLDDGMELFDFCRNKGVAINAMFYASLI 437

Query: 473 NCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFE 532
           + LGKAG ++ A  LF EM  +GC  +   YN +I   AK      AL L+  M+  G +
Sbjct: 438 DGLGKAGRIEDAENLFEEMSEKGCARDSYCYNAIIDALAKHGKIDQALALFGRMEEEGCD 497

Query: 533 PDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEW 592
               T++I+++ L      +EA   + +M  K   P    +  L       G V +A + 
Sbjct: 498 QTVYTFTILIDGLFKEHKNEEAIKFWDKMIDKGITPTVASFRALAIGLCLCGKVARACKI 557

Query: 593 YEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTE 652
            + +   G+ P       +++   +  ++ +A  L  G+++ G +   +  T+L++   +
Sbjct: 558 LDDLAPMGIIPETAF-EDMINTLCKAQRIKEACKLADGIVDRGREIPGRIRTVLINALRK 616

Query: 653 A 653
           A
Sbjct: 617 A 617



 Score = 80.1 bits (196), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 50/210 (23%), Positives = 101/210 (48%), Gaps = 7/210 (3%)

Query: 325 MDAYQANQVLKQLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLD 384
           +D+Y  N  +++      A+  F  ++ + GF+ D  TY+ +V  L ++ +     +L D
Sbjct: 367 IDSYSKNGSMEE------AMRLFERMKNE-GFEPDAVTYSVLVNGLCKSGRLDDGMELFD 419

Query: 385 QMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAG 444
                G   N + Y  LI   G+A  + +A ++F++M   GC  D   Y  +ID  AK G
Sbjct: 420 FCRNKGVAINAMFYASLIDGLGKAGRIEDAENLFEEMSEKGCARDSYCYNAIIDALAKHG 479

Query: 445 FLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYN 504
            +D A+ ++ +M+  G     +T++++I+ L K    + A + + +M+++G  P + ++ 
Sbjct: 480 KIDQALALFGRMEEEGCDQTVYTFTILIDGLFKEHKNEEAIKFWDKMIDKGITPTVASFR 539

Query: 505 IMIALQAKARNYQSALKLYRDMQNAGFEPD 534
            +            A K+  D+   G  P+
Sbjct: 540 ALAIGLCLCGKVARACKILDDLAPMGIIPE 569



 Score = 66.2 bits (160), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 70/323 (21%), Positives = 123/323 (38%), Gaps = 39/323 (12%)

Query: 471 IINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAG 530
           +I  L  +  L     +F E+ ++G +      N +I         +  L ++R M+  G
Sbjct: 156 LIELLTFSADLVKIRLVFFELKDRGLLMTESAANSLIKSFGNLGLVEELLWVWRRMKENG 215

Query: 531 FEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAW 590
            +P   TY+ ++  L +  +++ AE VF  M     VPD   Y +++  + KAG ++KA 
Sbjct: 216 IDPSLYTYNFLVNGLVNSMFIESAEKVFEVMDGGKIVPDTVTYNIMIKGYCKAGKLQKAM 275

Query: 591 EWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCC 650
           E +  M    ++P+  T  +L+ A            L   M   GL+    +Y+L++   
Sbjct: 276 EKFRDMEMKNVKPDKITYMTLIQACYSERDFDTCLSLYLEMEERGLEIPPHSYSLVIGGL 335

Query: 651 TEARSPYDMGFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRESKR 710
            + R       C E  AV                              E M+ +   +  
Sbjct: 336 CKQRK------CMEAYAV-----------------------------FETMNQKGCRANV 360

Query: 711 GLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAVKEKGMSYWLINLHVMSDGTAVIAL 770
            +  A++D   K+G  EEA  ++E    +   PDAV    +   L     + DG  +   
Sbjct: 361 AIYTALIDSYSKNGSMEEAMRLFERMKNEGFEPDAVTYSVLVNGLCKSGRLDDGMELFDF 420

Query: 771 SRTLAWFRKQM----LISGVGPS 789
            R        M    LI G+G +
Sbjct: 421 CRNKGVAINAMFYASLIDGLGKA 443


>gi|302826107|ref|XP_002994593.1| hypothetical protein SELMODRAFT_138846 [Selaginella moellendorffii]
 gi|300137364|gb|EFJ04344.1| hypothetical protein SELMODRAFT_138846 [Selaginella moellendorffii]
          Length = 521

 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 78/286 (27%), Positives = 147/286 (51%), Gaps = 3/286 (1%)

Query: 365 TMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVV 424
           T + +L  A+++     L   + +  C+PN+ TYNR+I  YG+A   ++A  +++ M+  
Sbjct: 179 TFLHVLEDAKEYRRAEALFRDLEKYECEPNIDTYNRMIVIYGKAGEPSKAEMLYRSMRRA 238

Query: 425 GCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAA 484
            C P+  T+  L++  A+ G    A   + K+Q     PD + Y+ ++    + G    A
Sbjct: 239 MCPPNICTFTALMNAFARQGLYREAERYFDKLQEFDYKPDHYAYNALMEAYSQGGSPAGA 298

Query: 485 HQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEV 544
            ++F  M   GC P+ V++NI+I    +A  Y+ A K+++ MQ+AGF P+  +  +++  
Sbjct: 299 LEIFQTMQRNGCFPDTVSHNILINAYGRAGLYEDAEKIFKSMQSAGFSPNLKSNMLLLSA 358

Query: 545 LGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAG---L 601
               G ++EAE + + M R    PD  +Y  L++ +G +G           M+++     
Sbjct: 359 YARAGRVEEAEELVSAMERDGTKPDTLIYNSLINAYGVSGRHEDMEALLAKMVKSSSKQT 418

Query: 602 RPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
           +P++ T N+L+  + + G +  A  L QG+  L L P   T+T L+
Sbjct: 419 KPDIGTYNTLIQVYAQAGFIPRAEELFQGLARLKLVPDATTWTALM 464



 Score =  140 bits (352), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 112/427 (26%), Positives = 191/427 (44%), Gaps = 18/427 (4%)

Query: 392 QPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMD 451
           +P++  YN LI +YG++  + +A   F +MQ   C P+  T+  LI+ +  AG  + A +
Sbjct: 101 RPDLGCYNLLIDAYGKSLNIEDAEKTFNRMQEALCVPNEETFGVLINGYRLAGSFEKAEE 160

Query: 452 MYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQA 511
           ++ +MQ  G SP     +  ++ L  A   + A  LF ++    C PN+ TYN MI +  
Sbjct: 161 LFVQMQKRGYSPGPLACNTFLHVLEDAKEYRRAEALFRDLEKYECEPNIDTYNRMIVIYG 220

Query: 512 KARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEP 571
           KA     A  LYR M+ A   P+  T++ +M      G   EAE  F +++  ++ PD  
Sbjct: 221 KAGEPSKAEMLYRSMRRAMCPPNICTFTALMNAFARQGLYREAERYFDKLQEFDYKPDHY 280

Query: 572 VYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGM 631
            Y  L++ + + G+   A E ++ M + G  P+  + N L++A+ R G   DA  + + M
Sbjct: 281 AYNALMEAYSQGGSPAGALEIFQTMQRNGCFPDTVSHNILINAYGRAGLYEDAEKIFKSM 340

Query: 632 LNLGLKPSLQTYTLLLSCCTEARSPYDMGFCHELMAVSGHPAHMFLLS--MPSPGPDGQN 689
            + G  P+L++  LLLS    A    +       M   G      + +  + + G  G++
Sbjct: 341 QSAGFSPNLKSNMLLLSAYARAGRVEEAEELVSAMERDGTKPDTLIYNSLINAYGVSGRH 400

Query: 690 VRDHVGSFLEMMHSEDRESKR--GLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAVK 747
             D      +M+ S  +++K   G  + ++    ++G    A  +++  A+  + PDA  
Sbjct: 401 -EDMEALLAKMVKSSSKQTKPDIGTYNTLIQVYAQAGFIPRAEELFQGLARLKLVPDATT 459

Query: 748 EKGMSYWLINLHVMSDGTAVIALSRTLAWFRKQMLISGVGPSRIDIVTGWGRRSRVTGTS 807
                 W      +  G A   L R      K+ML SG    R D VT     S      
Sbjct: 460 ------WT----ALMGGYAKKKLYRKCTSILKKMLESGC---RADAVTARVLFSACRSPE 506

Query: 808 LVRQAVQ 814
            V Q  Q
Sbjct: 507 QVEQVTQ 513



 Score =  130 bits (327), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 80/300 (26%), Positives = 140/300 (46%)

Query: 349 WLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRA 408
           W+ +   F+ D   Y  ++   G++       K  ++M    C PN  T+  LI+ Y  A
Sbjct: 93  WVLQGTTFRPDLGCYNLLIDAYGKSLNIEDAEKTFNRMQEALCVPNEETFGVLINGYRLA 152

Query: 409 NYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTY 468
               +A ++F QMQ  G  P  +   T + +   A     A  +++ ++     P+  TY
Sbjct: 153 GSFEKAEELFVQMQKRGYSPGPLACNTFLHVLEDAKEYRRAEALFRDLEKYECEPNIDTY 212

Query: 469 SVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQN 528
           + +I   GKAG    A  L+  M    C PN+ T+  ++   A+   Y+ A + +  +Q 
Sbjct: 213 NRMIVIYGKAGEPSKAEMLYRSMRRAMCPPNICTFTALMNAFARQGLYREAERYFDKLQE 272

Query: 529 AGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRK 588
             ++PD   Y+ +ME     G    A  +F  M+R    PD   + +L++ +G+AG    
Sbjct: 273 FDYKPDHYAYNALMEAYSQGGSPAGALEIFQTMQRNGCFPDTVSHNILINAYGRAGLYED 332

Query: 589 AWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
           A + +++M  AG  PN+ +   LLSA+ R G++ +A  L+  M   G KP    Y  L++
Sbjct: 333 AEKIFKSMQSAGFSPNLKSNMLLLSAYARAGRVEEAEELVSAMERDGTKPDTLIYNSLIN 392



 Score =  117 bits (294), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 69/273 (25%), Positives = 132/273 (48%), Gaps = 3/273 (1%)

Query: 362 TYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQM 421
           T+T ++    R   +    +  D++     +P+   YN L+ +Y +      AL++F+ M
Sbjct: 246 TFTALMNAFARQGLYREAERYFDKLQEFDYKPDHYAYNALMEAYSQGGSPAGALEIFQTM 305

Query: 422 QVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHL 481
           Q  GC PD V++  LI+ + +AG  + A  ++K MQ+AG SP+  +  ++++   +AG +
Sbjct: 306 QRNGCFPDTVSHNILINAYGRAGLYEDAEKIFKSMQSAGFSPNLKSNMLLLSAYARAGRV 365

Query: 482 QAAHQLFCEMVNQGCIPNLVTYNIMI---ALQAKARNYQSALKLYRDMQNAGFEPDKVTY 538
           + A +L   M   G  P+ + YN +I    +  +  + ++ L       +   +PD  TY
Sbjct: 366 EEAEELVSAMERDGTKPDTLIYNSLINAYGVSGRHEDMEALLAKMVKSSSKQTKPDIGTY 425

Query: 539 SIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQ 598
           + +++V    G++  AE +F  + R   VPD   +  L+  + K    RK     + ML+
Sbjct: 426 NTLIQVYAQAGFIPRAEELFQGLARLKLVPDATTWTALMGGYAKKKLYRKCTSILKKMLE 485

Query: 599 AGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGM 631
           +G R +  T   L SA     Q+     L++ +
Sbjct: 486 SGCRADAVTARVLFSACRSPEQVEQVTQLMESL 518



 Score = 95.1 bits (235), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 54/201 (26%), Positives = 97/201 (48%)

Query: 456 MQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARN 515
           +Q     PD   Y+++I+  GK+ +++ A + F  M    C+PN  T+ ++I     A +
Sbjct: 95  LQGTTFRPDLGCYNLLIDAYGKSLNIEDAEKTFNRMQEALCVPNEETFGVLINGYRLAGS 154

Query: 516 YQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGL 575
           ++ A +L+  MQ  G+ P  +  +  + VL        AEA+F ++ +    P+   Y  
Sbjct: 155 FEKAEELFVQMQKRGYSPGPLACNTFLHVLEDAKEYRRAEALFRDLEKYECEPNIDTYNR 214

Query: 576 LVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLG 635
           ++ ++GKAG   KA   Y +M +A   PN+ T  +L++AF R G   +A      +    
Sbjct: 215 MIVIYGKAGEPSKAEMLYRSMRRAMCPPNICTFTALMNAFARQGLYREAERYFDKLQEFD 274

Query: 636 LKPSLQTYTLLLSCCTEARSP 656
            KP    Y  L+   ++  SP
Sbjct: 275 YKPDHYAYNALMEAYSQGGSP 295



 Score = 69.7 bits (169), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 43/179 (24%), Positives = 83/179 (46%), Gaps = 3/179 (1%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYG---RA 408
           + AGF  +  +   ++    RA +     +L+  M RDG +P+ + YN LI++YG   R 
Sbjct: 341 QSAGFSPNLKSNMLLLSAYARAGRVEEAEELVSAMERDGTKPDTLIYNSLINAYGVSGRH 400

Query: 409 NYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTY 468
             +   L    +      +PD  TY TLI ++A+AGF+  A ++++ +    L PD  T+
Sbjct: 401 EDMEALLAKMVKSSSKQTKPDIGTYNTLIQVYAQAGFIPRAEELFQGLARLKLVPDATTW 460

Query: 469 SVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQ 527
           + ++    K    +    +  +M+  GC  + VT  ++ +        +   +L   +Q
Sbjct: 461 TALMGGYAKKKLYRKCTSILKKMLESGCRADAVTARVLFSACRSPEQVEQVTQLMESLQ 519


>gi|357116365|ref|XP_003559952.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g28010-like [Brachypodium distachyon]
          Length = 627

 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 111/390 (28%), Positives = 185/390 (47%), Gaps = 22/390 (5%)

Query: 281 PAGLAPFSRHFASTGNVVESVSRILRQWKWGPLAEE--ALGNTNYSMDAYQANQVLKQLQ 338
           P   APF       G   E+ +R+ R  +  PL E    L +     DA   N VL  L 
Sbjct: 31  PRRAAPFLAVLLRRGRA-EASARLNRLLRLVPLPESPALLSSLPSVRDAVSYNTVLAALC 89

Query: 339 DHTVALGFFNWLRRQAGFKHDEH----TYTTMVGILGRARQFGAINKLLDQMVRDGCQPN 394
                L    +L R     H+      +YTT++  L   R+ G    LL  M   G +P+
Sbjct: 90  RQGGCLDAALFLLRV--MAHETRPTAVSYTTLMRALCAERRTGQAVGLLRDMQASGVRPD 147

Query: 395 VVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYK 454
           VVTY  LI     A  +++A+++ ++M   G EP+ V Y  L+  + KAG  +    +++
Sbjct: 148 VVTYGTLIRGLCDAADVDKAVELLREMCESGIEPNVVVYSCLLQGYCKAGRWECVSKVFE 207

Query: 455 KMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKAR 514
           +M   G+ PD   Y+ +I+ L + G ++ A Q+  +M+ +G  PN+VTYN++I    K  
Sbjct: 208 EMSGRGIEPDVVMYTGLIDSLCREGKVKKATQVMDKMMERGLEPNVVTYNVLINSMCKEG 267

Query: 515 NYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWV--PDEPV 572
           + + A+ L  +M   G   D VTY+ ++  L     +DEA  +  EM     +  P+   
Sbjct: 268 SVKEAMSLRNNMLEKGVALDAVTYNTLITGLSGVLEMDEAMGLLEEMIHGETMVEPNVVT 327

Query: 573 YGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGML 632
           +  ++    K G +R+A++  + M + G   N+ T N L+   LRV ++  A  L+  M 
Sbjct: 328 FNSVIHGLCKTGRMRQAFQVRDMMAENGCACNLVTFNLLIGGLLRVHKVKKAMELMDEMA 387

Query: 633 NLGLKPSLQTYTLLLSCCTEARSPYDMGFC 662
           + GL+P   TY++L++           GFC
Sbjct: 388 SSGLEPDSFTYSILIN-----------GFC 406



 Score =  130 bits (327), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 92/301 (30%), Positives = 144/301 (47%), Gaps = 2/301 (0%)

Query: 354 AGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNE 413
           +G + D  TY T++  L  A       +LL +M   G +PNVV Y+ L+  Y +A     
Sbjct: 142 SGVRPDVVTYGTLIRGLCDAADVDKAVELLREMCESGIEPNVVVYSCLLQGYCKAGRWEC 201

Query: 414 ALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIIN 473
              VF++M   G EPD V Y  LID   + G +  A  +  KM   GL P+  TY+V+IN
Sbjct: 202 VSKVFEEMSGRGIEPDVVMYTGLIDSLCREGKVKKATQVMDKMMERGLEPNVVTYNVLIN 261

Query: 474 CLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAG--F 531
            + K G ++ A  L   M+ +G   + VTYN +I   +       A+ L  +M +     
Sbjct: 262 SMCKEGSVKEAMSLRNNMLEKGVALDAVTYNTLITGLSGVLEMDEAMGLLEEMIHGETMV 321

Query: 532 EPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWE 591
           EP+ VT++ V+  L   G + +A  V   M       +   + LL+    +   V+KA E
Sbjct: 322 EPNVVTFNSVIHGLCKTGRMRQAFQVRDMMAENGCACNLVTFNLLIGGLLRVHKVKKAME 381

Query: 592 WYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCT 651
             + M  +GL P+  T + L++ F ++ Q+  A  LL  M   G++P L  Y  LL+   
Sbjct: 382 LMDEMASSGLEPDSFTYSILINGFCKMWQVDRAESLLSKMRRDGIEPELVHYIPLLAALC 441

Query: 652 E 652
           E
Sbjct: 442 E 442



 Score =  115 bits (289), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 77/281 (27%), Positives = 127/281 (45%), Gaps = 38/281 (13%)

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMV--RDGCQPNVVTYNRLIHSYGRANY 410
           + G   D  TY T++  L    +      LL++M+      +PNVVT+N +IH   +   
Sbjct: 281 EKGVALDAVTYNTLITGLSGVLEMDEAMGLLEEMIHGETMVEPNVVTFNSVIHGLCKTGR 340

Query: 411 LNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSV 470
           + +A  V   M   GC  + VT+  LI    +   +  AM++  +M ++GL PD+FTYS+
Sbjct: 341 MRQAFQVRDMMAENGCACNLVTFNLLIGGLLRVHKVKKAMELMDEMASSGLEPDSFTYSI 400

Query: 471 IIN-----------------------------------CLGKAGHLQAAHQLFCEMVNQG 495
           +IN                                    L + G ++ A   F EM ++ 
Sbjct: 401 LINGFCKMWQVDRAESLLSKMRRDGIEPELVHYIPLLAALCEQGMMEQARNFFDEM-HKN 459

Query: 496 CIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAE 555
           C  ++V Y+ MI    + R+ +SA +  + M + G  PD VTYS+++ +  + G L  AE
Sbjct: 460 CKLDVVAYSTMIHGACRLRDRKSAEEFLKHMLDEGLIPDSVTYSMLINMFANSGDLGAAE 519

Query: 556 AVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAM 596
            V  +M    +VPD  V+  L+  +G  G+  K  E    M
Sbjct: 520 RVLKQMTASGFVPDVAVFDSLIKGYGAKGDTEKVLELIREM 560



 Score = 85.5 bits (210), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 37/236 (15%)

Query: 371 GRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDR 430
           GR RQ   +    D M  +GC  N+VT+N LI    R + + +A+++  +M   G EPD 
Sbjct: 339 GRMRQAFQVR---DMMAENGCACNLVTFNLLIGGLLRVHKVKKAMELMDEMASSGLEPDS 395

Query: 431 VTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCE 490
            TY  LI+   K   +D A  +  KM+  G+ P+   Y  ++  L + G ++ A   F E
Sbjct: 396 FTYSILINGFCKMWQVDRAESLLSKMRRDGIEPELVHYIPLLAALCEQGMMEQARNFFDE 455

Query: 491 M----------------------------------VNQGCIPNLVTYNIMIALQAKARNY 516
           M                                  +++G IP+ VTY+++I + A + + 
Sbjct: 456 MHKNCKLDVVAYSTMIHGACRLRDRKSAEEFLKHMLDEGLIPDSVTYSMLINMFANSGDL 515

Query: 517 QSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPV 572
            +A ++ + M  +GF PD   +  +++  G  G  ++   +  EM  K+   D  +
Sbjct: 516 GAAERVLKQMTASGFVPDVAVFDSLIKGYGAKGDTEKVLELIREMTAKDIALDSKI 571



 Score = 60.1 bits (144), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 38/133 (28%), Positives = 64/133 (48%), Gaps = 2/133 (1%)

Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLI 402
           A  FF+ + +    K D   Y+TM+    R R   +  + L  M+ +G  P+ VTY+ LI
Sbjct: 449 ARNFFDEMHKNC--KLDVVAYSTMIHGACRLRDRKSAEEFLKHMLDEGLIPDSVTYSMLI 506

Query: 403 HSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLS 462
           + +  +  L  A  V KQM   G  PD   + +LI  +   G  +  +++ ++M A  ++
Sbjct: 507 NMFANSGDLGAAERVLKQMTASGFVPDVAVFDSLIKGYGAKGDTEKVLELIREMTAKDIA 566

Query: 463 PDTFTYSVIINCL 475
            D+   S I  CL
Sbjct: 567 LDSKIISTIYTCL 579


>gi|356523854|ref|XP_003530549.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g16890, mitochondrial-like [Glycine max]
          Length = 678

 Score =  147 bits (371), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 80/283 (28%), Positives = 147/283 (51%), Gaps = 1/283 (0%)

Query: 347 FNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYG 406
           F  LR+Q G K     Y  ++ +L +       +++  Q++ DG   NV +YN +I+ + 
Sbjct: 382 FEILRKQ-GVKAGIGAYLALIEVLYKNEWREEGDRVYGQLISDGLISNVFSYNMIINCFC 440

Query: 407 RANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTF 466
           RA  ++ A + F+ MQV G  P+ VT+ TLI+ H K G +D A  + + +   GL PD F
Sbjct: 441 RAKLMDNASEAFRDMQVRGVVPNLVTFNTLINGHCKDGAIDKARKLLESLLENGLKPDIF 500

Query: 467 TYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDM 526
           T+S I++ L +    + A + F EM+  G  PN V YNI+I       +   ++KL R M
Sbjct: 501 TFSSIVDGLCQIKRTEEALECFTEMIEWGINPNAVIYNILIRSLCTIGDVARSVKLLRRM 560

Query: 527 QNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNV 586
           Q  G  PD  +Y+ ++++      +++A+ +F  M R    PD   Y   ++   ++G +
Sbjct: 561 QKEGISPDTYSYNALIQIFCRMNKVEKAKKLFDSMSRSGLNPDNYTYSAFIEALSESGRL 620

Query: 587 RKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQ 629
            +A + + +M   G  P+   CN ++   ++   + +A ++++
Sbjct: 621 EEAKKMFYSMEANGCSPDSYICNLIIKILVQQEYVEEAQNIIE 663



 Score =  112 bits (281), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 71/266 (26%), Positives = 127/266 (47%)

Query: 388 RDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLD 447
           R G  P    +N ++    +   L E  DVF+ ++  G +     Y  LI++  K  + +
Sbjct: 352 RGGYFPGNSVFNVVMACLVKGAELRETCDVFEILRKQGVKAGIGAYLALIEVLYKNEWRE 411

Query: 448 VAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMI 507
               +Y ++ + GL  + F+Y++IINC  +A  +  A + F +M  +G +PNLVT+N +I
Sbjct: 412 EGDRVYGQLISDGLISNVFSYNMIINCFCRAKLMDNASEAFRDMQVRGVVPNLVTFNTLI 471

Query: 508 ALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWV 567
               K      A KL   +   G +PD  T+S +++ L      +EA   F EM      
Sbjct: 472 NGHCKDGAIDKARKLLESLLENGLKPDIFTFSSIVDGLCQIKRTEEALECFTEMIEWGIN 531

Query: 568 PDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHL 627
           P+  +Y +L+      G+V ++ +    M + G+ P+  + N+L+  F R+ ++  A  L
Sbjct: 532 PNAVIYNILIRSLCTIGDVARSVKLLRRMQKEGISPDTYSYNALIQIFCRMNKVEKAKKL 591

Query: 628 LQGMLNLGLKPSLQTYTLLLSCCTEA 653
              M   GL P   TY+  +   +E+
Sbjct: 592 FDSMSRSGLNPDNYTYSAFIEALSES 617



 Score =  107 bits (267), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 61/250 (24%), Positives = 119/250 (47%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           G   +  +Y  ++    RA+     ++    M   G  PN+VT+N LI+ + +   +++A
Sbjct: 424 GLISNVFSYNMIINCFCRAKLMDNASEAFRDMQVRGVVPNLVTFNTLINGHCKDGAIDKA 483

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
             + + +   G +PD  T+ +++D   +    + A++ + +M   G++P+   Y+++I  
Sbjct: 484 RKLLESLLENGLKPDIFTFSSIVDGLCQIKRTEEALECFTEMIEWGINPNAVIYNILIRS 543

Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPD 534
           L   G +  + +L   M  +G  P+  +YN +I +  +    + A KL+  M  +G  PD
Sbjct: 544 LCTIGDVARSVKLLRRMQKEGISPDTYSYNALIQIFCRMNKVEKAKKLFDSMSRSGLNPD 603

Query: 535 KVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYE 594
             TYS  +E L   G L+EA+ +F  M      PD  +  L++ +  +   V +A    E
Sbjct: 604 NYTYSAFIEALSESGRLEEAKKMFYSMEANGCSPDSYICNLIIKILVQQEYVEEAQNIIE 663

Query: 595 AMLQAGLRPN 604
              Q G+  N
Sbjct: 664 RCRQKGISLN 673



 Score =  101 bits (252), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 66/312 (21%), Positives = 146/312 (46%), Gaps = 3/312 (0%)

Query: 330 ANQVLKQLQDHTVALGFFNWLRR---QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQM 386
            + VL  L ++++A     +LRR   + G+      +  ++  L +  +      + + +
Sbjct: 326 CDTVLYCLANNSMAKEMVVFLRRVLGRGGYFPGNSVFNVVMACLVKGAELRETCDVFEIL 385

Query: 387 VRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFL 446
            + G +  +  Y  LI    +  +  E   V+ Q+   G   +  +Y  +I+   +A  +
Sbjct: 386 RKQGVKAGIGAYLALIEVLYKNEWREEGDRVYGQLISDGLISNVFSYNMIINCFCRAKLM 445

Query: 447 DVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIM 506
           D A + ++ MQ  G+ P+  T++ +IN   K G +  A +L   ++  G  P++ T++ +
Sbjct: 446 DNASEAFRDMQVRGVVPNLVTFNTLINGHCKDGAIDKARKLLESLLENGLKPDIFTFSSI 505

Query: 507 IALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNW 566
           +    + +  + AL+ + +M   G  P+ V Y+I++  L   G +  +  +   M+++  
Sbjct: 506 VDGLCQIKRTEEALECFTEMIEWGINPNAVIYNILIRSLCTIGDVARSVKLLRRMQKEGI 565

Query: 567 VPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYH 626
            PD   Y  L+ ++ +   V KA + +++M ++GL P+  T ++ + A    G+L +A  
Sbjct: 566 SPDTYSYNALIQIFCRMNKVEKAKKLFDSMSRSGLNPDNYTYSAFIEALSESGRLEEAKK 625

Query: 627 LLQGMLNLGLKP 638
           +   M   G  P
Sbjct: 626 MFYSMEANGCSP 637



 Score = 88.2 bits (217), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 48/184 (26%), Positives = 89/184 (48%)

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
           + G K D  T++++V  L + ++     +   +M+  G  PN V YN LI S      + 
Sbjct: 492 ENGLKPDIFTFSSIVDGLCQIKRTEEALECFTEMIEWGINPNAVIYNILIRSLCTIGDVA 551

Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
            ++ + ++MQ  G  PD  +Y  LI I  +   ++ A  ++  M  +GL+PD +TYS  I
Sbjct: 552 RSVKLLRRMQKEGISPDTYSYNALIQIFCRMNKVEKAKKLFDSMSRSGLNPDNYTYSAFI 611

Query: 473 NCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFE 532
             L ++G L+ A ++F  M   GC P+    N++I +  +    + A  +    +  G  
Sbjct: 612 EALSESGRLEEAKKMFYSMEANGCSPDSYICNLIIKILVQQEYVEEAQNIIERCRQKGIS 671

Query: 533 PDKV 536
            + +
Sbjct: 672 LNSI 675



 Score = 80.9 bits (198), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 91/487 (18%), Positives = 188/487 (38%), Gaps = 41/487 (8%)

Query: 301 VSRILRQWKWGPLAEEALGNTNYSMDAYQANQVLKQLQDHTVALGFFNWLRR-QAGFKHD 359
           +S++L +  W  L    L +    ++   A  + +  Q+ + A+ F +WL          
Sbjct: 49  ISQLLSRPDWAVLLNHDLSSKTLLLNPSYAVSIFQNQQNPSHAIKFHSWLSHVNPTLAAH 108

Query: 360 EHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFK 419
              +  +   L R         LL ++   G +        L+ S+GR    N +  VF 
Sbjct: 109 NSVHRALRNTLHRKGPALLSVDLLRELRNLGFRVTEDLLCALLASWGRLGLANYSAHVFC 168

Query: 420 QMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAG 479
           Q+  +G  P    Y  LID   K+  +D+A   +++M A     D FTY+ +I+ + K G
Sbjct: 169 QISFLGLSPTTRLYNALIDALVKSNSIDLAYLKFQQMAADNCVADRFTYNTLIHGVCKVG 228

Query: 480 HLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYS 539
            +  A +L  +M ++G  PN+ TY ++I     A     A  ++  M+++G  P++ T  
Sbjct: 229 VVDEALRLVRQMKDKGHFPNVFTYTMLIEGFCIASRVDEAFGVFETMKDSGVYPNEATVR 288

Query: 540 IVMEVLGHC-----------GYLDEAE---------------------------AVFAE- 560
            ++  +  C            +LD  +                            VF   
Sbjct: 289 ALVHGVFRCVDPSKALELLSEFLDREQEQERVHFMLACDTVLYCLANNSMAKEMVVFLRR 348

Query: 561 -MRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVG 619
            + R  + P   V+ +++    K   +R+  + +E + + G++  +    +L+    +  
Sbjct: 349 VLGRGGYFPGNSVFNVVMACLVKGAELRETCDVFEILRKQGVKAGIGAYLALIEVLYKNE 408

Query: 620 QLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGFCHELMAVSGHPAHMFLLS 679
              +   +   +++ GL  ++ +Y ++++C   A+   +       M V G   ++   +
Sbjct: 409 WREEGDRVYGQLISDGLISNVFSYNMIINCFCRAKLMDNASEAFRDMQVRGVVPNLVTFN 468

Query: 680 MPSPGPDGQNVRDHVGSFLEMMHSEDRESKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQK 739
               G       D     LE +     +       ++VD L +    EEA   +    + 
Sbjct: 469 TLINGHCKDGAIDKARKLLESLLENGLKPDIFTFSSIVDGLCQIKRTEEALECFTEMIEW 528

Query: 740 NVYPDAV 746
            + P+AV
Sbjct: 529 GINPNAV 535



 Score = 59.3 bits (142), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 32/119 (26%), Positives = 57/119 (47%), Gaps = 2/119 (1%)

Query: 350 LRR--QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGR 407
           LRR  + G   D ++Y  ++ I  R  +     KL D M R G  P+  TY+  I +   
Sbjct: 557 LRRMQKEGISPDTYSYNALIQIFCRMNKVEKAKKLFDSMSRSGLNPDNYTYSAFIEALSE 616

Query: 408 ANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTF 466
           +  L EA  +F  M+  GC PD      +I I  +  +++ A ++ ++ +  G+S ++ 
Sbjct: 617 SGRLEEAKKMFYSMEANGCSPDSYICNLIIKILVQQEYVEEAQNIIERCRQKGISLNSI 675


>gi|32527604|gb|AAP86199.1| pentatricopeptide repeat-containing protein [Raphanus sativus]
          Length = 686

 Score =  147 bits (371), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 95/307 (30%), Positives = 155/307 (50%), Gaps = 15/307 (4%)

Query: 338 QDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVT 397
           QD   A     +L    G   D  T+TT++     A++     +LL +M R G   N VT
Sbjct: 371 QDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVT 430

Query: 398 YNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQ 457
           YN LIH +     LN ALD+ +QM   G  PD VT  TL+D     G L  A++M+K MQ
Sbjct: 431 YNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQ 490

Query: 458 AA-----------GLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIM 506
            +           G+ PD  TY+++I  L   G    A +L+ EM ++G +P+ +TY+ M
Sbjct: 491 KSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSM 550

Query: 507 IALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHC--GYLDEAEAVFAEMRRK 564
           I    K      A +++  M +  F P+ VT++ ++   G+C  G +D+   +F EM R+
Sbjct: 551 IDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLIN--GYCKAGRVDDGLELFCEMGRR 608

Query: 565 NWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDA 624
             V D  +Y  L+  + K GN+  A + ++ M+ +G+ P+  T  ++L+ F    +L  A
Sbjct: 609 GIVADAIIYITLIYGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGFWSKEELERA 668

Query: 625 YHLLQGM 631
             +L+ +
Sbjct: 669 VAMLEDL 675



 Score =  131 bits (329), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 87/309 (28%), Positives = 153/309 (49%), Gaps = 16/309 (5%)

Query: 353 QAGFKHDEHTYTTMV-GILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           + G + D+ TY T V G+        A+N L         +PNVV Y+ +I    +    
Sbjct: 210 ENGLQPDQITYGTFVDGMCKMGDTVSALNLLRKMEEISHIKPNVVIYSAIIDGLCKDGRH 269

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
           +++ ++F +MQ  G  P+ VTY  +I     +G    A  + ++M    +SP+  TY+ +
Sbjct: 270 SDSHNLFIEMQDKGIFPNIVTYNCMIGGFCISGRWSAAQRLLQEMLERKISPNVVTYNAL 329

Query: 472 INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF 531
           IN   K G    A +L+ EM+ +G IPN +TYN MI    K     +A  ++  M   G 
Sbjct: 330 INAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGC 389

Query: 532 EPDKVTYSIVMEVLGHCG--YLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKA 589
            PD  T++ +++  G+CG   +D+   +  EM R+  V +   Y  L+  +   G++  A
Sbjct: 390 SPDVFTFTTLID--GYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAA 447

Query: 590 WEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGM----LNL-------GLKP 638
            +  + M+ +G+ P++ TCN+LL      G+L DA  + + M    ++L       G++P
Sbjct: 448 LDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEP 507

Query: 639 SLQTYTLLL 647
            + TY +L+
Sbjct: 508 DVLTYNILI 516



 Score =  130 bits (327), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 87/306 (28%), Positives = 148/306 (48%), Gaps = 6/306 (1%)

Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLI 402
           AL  F  L +  G   D  T+TT++  L    +      L  Q+    C+P+V+T+  L+
Sbjct: 135 ALSTFGKLTK-LGLHPDVVTFTTLLHGLCLDHRVSEALDLFHQI----CRPDVLTFTTLM 189

Query: 403 HSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAG-L 461
           +   R   + EA+ +  +M   G +PD++TY T +D   K G    A+++ +KM+    +
Sbjct: 190 NGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGMCKMGDTVSALNLLRKMEEISHI 249

Query: 462 SPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALK 521
            P+   YS II+ L K G    +H LF EM ++G  PN+VTYN MI     +  + +A +
Sbjct: 250 KPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGGFCISGRWSAAQR 309

Query: 522 LYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWG 581
           L ++M      P+ VTY+ ++      G   EA  ++ EM  +  +P+   Y  ++D + 
Sbjct: 310 LLQEMLERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFC 369

Query: 582 KAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQ 641
           K   +  A + +  M   G  P+V T  +L+  +    ++ D   LL  M   GL  +  
Sbjct: 370 KQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTV 429

Query: 642 TYTLLL 647
           TY  L+
Sbjct: 430 TYNTLI 435



 Score =  118 bits (296), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 103/439 (23%), Positives = 188/439 (42%), Gaps = 27/439 (6%)

Query: 336 QLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNV 395
           ++ D   AL     +   +  K +   Y+ ++  L +  +    + L  +M   G  PN+
Sbjct: 229 KMGDTVSALNLLRKMEEISHIKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNI 288

Query: 396 VTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKK 455
           VTYN +I  +  +   + A  + ++M      P+ VTY  LI+   K G    A ++Y +
Sbjct: 289 VTYNCMIGGFCISGRWSAAQRLLQEMLERKISPNVVTYNALINAFVKEGKFFEAAELYDE 348

Query: 456 MQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARN 515
           M   G+ P+T TY+ +I+   K   L AA  +F  M  +GC P++ T+  +I     A+ 
Sbjct: 349 MLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKR 408

Query: 516 YQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGL 575
               ++L  +M   G   + VTY+ ++      G L+ A  +  +M      PD      
Sbjct: 409 IDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNT 468

Query: 576 LVDLWGKAGNVRKAWEWYEAMLQA-----------GLRPNVPTCNSLLSAFLRVGQLSDA 624
           L+D     G ++ A E ++AM ++           G+ P+V T N L+   +  G+  +A
Sbjct: 469 LLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEA 528

Query: 625 YHLLQGMLNLGLKPSLQTYTLLLS-CCTEARSPYDMGFCHELMAVSGHPAHMFLLSMPSP 683
             L + M + G+ P   TY+ ++   C ++R          + + S  P  +   ++ + 
Sbjct: 529 EELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLING 588

Query: 684 GPDGQNVRDHVGSFLEMMHSEDRESKRGLV-DAVVDF-----LHKSGLKEEAGSVWEVAA 737
                 V D +  F EM        +RG+V DA++         K G    A  +++   
Sbjct: 589 YCKAGRVDDGLELFCEM-------GRRGIVADAIIYITLIYGFRKVGNINGALDIFQEMI 641

Query: 738 QKNVYPDAVKEKGM--SYW 754
              VYPD +  + M   +W
Sbjct: 642 SSGVYPDTITIRNMLTGFW 660



 Score =  116 bits (291), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 100/394 (25%), Positives = 181/394 (45%), Gaps = 23/394 (5%)

Query: 363 YTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQ 422
           +  ++G + R  +   +  L  +M R   + ++ ++  LI  +   + L  AL  F ++ 
Sbjct: 84  FNKLMGAVVRMERPDLVISLYQKMERKQIRCDIYSFTILIKCFCSCSKLPFALSTFGKLT 143

Query: 423 VVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQ 482
            +G  PD VT+ TL+        +  A+D++ ++      PD  T++ ++N L + G + 
Sbjct: 144 KLGLHPDVVTFTTLLHGLCLDHRVSEALDLFHQI----CRPDVLTFTTLMNGLCREGRVV 199

Query: 483 AAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAG-FEPDKVTYSIV 541
            A  L   MV  G  P+ +TY   +    K  +  SAL L R M+     +P+ V YS +
Sbjct: 200 EAVALLDRMVENGLQPDQITYGTFVDGMCKMGDTVSALNLLRKMEEISHIKPNVVIYSAI 259

Query: 542 MEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGL 601
           ++ L   G   ++  +F EM+ K   P+   Y  ++  +  +G    A    + ML+  +
Sbjct: 260 IDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGGFCISGRWSAAQRLLQEMLERKI 319

Query: 602 RPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTY-TLLLSCCTEAR--SPYD 658
            PNV T N+L++AF++ G+  +A  L   ML  G+ P+  TY +++   C + R  +  D
Sbjct: 320 SPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAED 379

Query: 659 MGFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRESKRGLVDAVVD 718
           M +   LMA  G    +F  +    G  G      +   +E++H   R   RGLV   V 
Sbjct: 380 MFY---LMATKGCSPDVFTFTTLIDGYCGAK---RIDDGMELLHEMPR---RGLVANTVT 430

Query: 719 F---LHKSGLKEEAGSVWEVAAQ---KNVYPDAV 746
           +   +H   L  +  +  +++ Q     V PD V
Sbjct: 431 YNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIV 464



 Score = 78.2 bits (191), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 46/173 (26%), Positives = 85/173 (49%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           G + D  TY  ++  L    +F    +L ++M   G  P+ +TY+ +I    + + L+EA
Sbjct: 504 GVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEA 563

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
             +F  M      P+ VT+ TLI+ + KAG +D  ++++ +M   G+  D   Y  +I  
Sbjct: 564 TQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVADAIIYITLIYG 623

Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQ 527
             K G++  A  +F EM++ G  P+ +T   M+         + A+ +  D+Q
Sbjct: 624 FRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGFWSKEELERAVAMLEDLQ 676



 Score = 56.2 bits (134), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 77/383 (20%), Positives = 136/383 (35%), Gaps = 99/383 (25%)

Query: 411 LNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSV 470
           L +A+D+F  M      P  + +  L+    +    D+ + +Y+KM+   +  D +++++
Sbjct: 62  LEDAIDLFSDMLRSRPLPSVIDFNKLMGAVVRMERPDLVISLYQKMERKQIRCDIYSFTI 121

Query: 471 IINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAG 530
           +I C             FC                             AL  +  +   G
Sbjct: 122 LIKC-------------FC----------------------SCSKLPFALSTFGKLTKLG 146

Query: 531 FEPDKVTYSIVMEVL-----------------------------GHC--GYLDEAEAVFA 559
             PD VT++ ++  L                             G C  G + EA A+  
Sbjct: 147 LHPDVVTFTTLLHGLCLDHRVSEALDLFHQICRPDVLTFTTLMNGLCREGRVVEAVALLD 206

Query: 560 EMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAG-LRPNVPTCNSLLSAFLRV 618
            M      PD+  YG  VD   K G+   A      M +   ++PNV   ++++    + 
Sbjct: 207 RMVENGLQPDQITYGTFVDGMCKMGDTVSALNLLRKMEEISHIKPNVVIYSAIIDGLCKD 266

Query: 619 GQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGFCHELMAVSGH--PAHMF 676
           G+ SD+++L   M + G+ P++ TY  ++            GFC     +SG    A   
Sbjct: 267 GRHSDSHNLFIEMQDKGIFPNIVTYNCMIG-----------GFC-----ISGRWSAAQRL 310

Query: 677 LLSM----PSPGPDGQNVRDHV----GSFLEMMHSEDRESKRGLV------DAVVDFLHK 722
           L  M     SP     N   +     G F E     D    RG++      ++++D   K
Sbjct: 311 LQEMLERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCK 370

Query: 723 SGLKEEAGSVWEVAAQKNVYPDA 745
               + A  ++ + A K   PD 
Sbjct: 371 QDRLDAAEDMFYLMATKGCSPDV 393


>gi|225452994|ref|XP_002263091.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 588

 Score =  147 bits (371), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 89/289 (30%), Positives = 151/289 (52%)

Query: 359 DEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVF 418
           D  T  T+V  L +       + ++D M+  G +PNVVTYN L+  +   N ++ A+ VF
Sbjct: 279 DVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVF 338

Query: 419 KQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKA 478
             M    C  + ++Y TLI+ + K   +D AM ++++M    L+P+T TY+ +I+ L   
Sbjct: 339 DTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHV 398

Query: 479 GHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTY 538
           G LQ A  LF EMV +G IP+LVTY  +     K R+   A+ L + ++ + ++PD   Y
Sbjct: 399 GRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIY 458

Query: 539 SIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQ 598
           + +++ +   G L++A  +F+ +  K   P+   Y +++    K G + +A + +  M +
Sbjct: 459 TTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNK 518

Query: 599 AGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
            G  PN  T N +   FLR  +      LL+ ML  G    + T TLL+
Sbjct: 519 NGCSPNDCTYNLITRGFLRNNEALRTIELLEEMLARGFSVDVSTTTLLV 567



 Score =  138 bits (348), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 90/340 (26%), Positives = 159/340 (46%), Gaps = 36/340 (10%)

Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLI 402
           AL  F+ +  + GF+ +  TY T++  L +     A  +LL  M +  CQPNVV ++ LI
Sbjct: 159 ALHLFDKMIGE-GFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNVVVFSTLI 217

Query: 403 HSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLS 462
            S  +   + EA ++F +M   G  P+ VTY +LI    K         +  +M  + + 
Sbjct: 218 DSLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIM 277

Query: 463 PDTFTYSVIINCLGKAGHLQAAH-----------------------------------QL 487
           PD FT + +++ L K G +  AH                                   ++
Sbjct: 278 PDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKV 337

Query: 488 FCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGH 547
           F  MV++ C+ N+++YN +I    K ++   A+ L+ +M      P+ VTY+ ++  L H
Sbjct: 338 FDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCH 397

Query: 548 CGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPT 607
            G L +A ++F EM  +  +PD   Y  L D   K  ++ KA    +A+  +   P++  
Sbjct: 398 VGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQI 457

Query: 608 CNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
             ++L    R G+L DA  L   + + GL+P++ TY +++
Sbjct: 458 YTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMI 497



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 86/285 (30%), Positives = 139/285 (48%)

Query: 362 TYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQM 421
           TY +++  L +  ++  +  L+++MV     P+V T N ++ +  +   + EA DV   M
Sbjct: 247 TYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMM 306

Query: 422 QVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHL 481
              G EP+ VTY  L+D H     +DVA+ ++  M       +  +Y+ +IN   K   +
Sbjct: 307 IHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSV 366

Query: 482 QAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIV 541
             A  LF EM  Q   PN VTYN +I         Q A+ L+ +M   G  PD VTY  +
Sbjct: 367 DKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTL 426

Query: 542 MEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGL 601
            + L    +LD+A A+   +   NW PD  +Y  ++D   +AG +  A + +  +   GL
Sbjct: 427 SDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRAGELEDARDLFSNLSSKGL 486

Query: 602 RPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLL 646
           +PNV T N ++    + G L++A  L   M   G  P+  TY L+
Sbjct: 487 QPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCSPNDCTYNLI 531



 Score =  125 bits (313), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 95/337 (28%), Positives = 147/337 (43%), Gaps = 42/337 (12%)

Query: 350 LRRQA---GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYG 406
           L RQ    G   D +T   ++  L    +       L ++++ G QP+  T+  LI    
Sbjct: 92  LSRQMDSFGIPPDVYTLAIVINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLC 151

Query: 407 RANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTF 466
               + EAL +F +M   G +P+ VTY TLI+   K G    A+ + + M+     P+  
Sbjct: 152 VEGKIGEALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNVV 211

Query: 467 TYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDM 526
            +S +I+ L K   +  A  +F EM+ +G  PN+VTYN +I    K   ++    L  +M
Sbjct: 212 VFSTLIDSLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEM 271

Query: 527 QNA-----------------------------------GFEPDKVTYSIVMEVLGHC--G 549
            ++                                   G EP+ VTY+ +M+  GHC   
Sbjct: 272 VDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMD--GHCLRN 329

Query: 550 YLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCN 609
            +D A  VF  M  K+ V +   Y  L++ + K  +V KA   +E M +  L PN  T N
Sbjct: 330 EVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYN 389

Query: 610 SLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLL 646
           +L+     VG+L DA  L   M+  G  P L TY  L
Sbjct: 390 TLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTL 426



 Score =  116 bits (291), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 70/265 (26%), Positives = 131/265 (49%)

Query: 383 LDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAK 442
            ++M+     P+ V +NRL+ S  +  + +  L + +QM   G  PD  T   +I+    
Sbjct: 58  FNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVYTLAIVINSLCH 117

Query: 443 AGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVT 502
              +D A     K+   G  PD  T++ +I  L   G +  A  LF +M+ +G  PN+VT
Sbjct: 118 LNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEGFQPNVVT 177

Query: 503 YNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMR 562
           Y  +I    K  N  +A++L R M+    +P+ V +S +++ L     + EA  +F+EM 
Sbjct: 178 YGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNVVVFSTLIDSLCKDRQVTEAFNIFSEMI 237

Query: 563 RKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLS 622
            K   P+   Y  L+    K    +        M+ + + P+V T N+++ A  + G ++
Sbjct: 238 TKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDALCKEGMVA 297

Query: 623 DAYHLLQGMLNLGLKPSLQTYTLLL 647
           +A+ ++  M++ G++P++ TY  L+
Sbjct: 298 EAHDVVDMMIHRGVEPNVVTYNALM 322



 Score =  109 bits (272), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 92/412 (22%), Positives = 170/412 (41%), Gaps = 37/412 (8%)

Query: 370 LGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPD 429
           + + +    +  L  QM   G  P+V T   +I+S    N ++ A     ++  +G +PD
Sbjct: 80  IAKTKHHSTLLSLSRQMDSFGIPPDVYTLAIVINSLCHLNRVDFAFSALAKILKLGHQPD 139

Query: 430 RVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFC 489
             T+ TLI      G +  A+ ++ KM   G  P+  TY  +IN L K G+  AA +L  
Sbjct: 140 ATTFTTLIRGLCVEGKIGEALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTSAAIRLLR 199

Query: 490 EMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCG 549
            M    C PN+V ++ +I    K R    A  ++ +M   G  P+ VTY+ ++  L    
Sbjct: 200 SMEQGNCQPNVVVFSTLIDSLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLC 259

Query: 550 YLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPT-- 607
                  +  EM     +PD      +VD   K G V +A +  + M+  G+ PNV T  
Sbjct: 260 EWKHVTTLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYN 319

Query: 608 ------C---------------------------NSLLSAFLRVGQLSDAYHLLQGMLNL 634
                 C                           N+L++ + ++  +  A +L + M   
Sbjct: 320 ALMDGHCLRNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQ 379

Query: 635 GLKPSLQTY-TLLLSCCTEARSPYDMGFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDH 693
            L P+  TY TL+   C   R    +   HE++A    P  +   ++       +++ D 
Sbjct: 380 ELTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHL-DK 438

Query: 694 VGSFLEMMHSEDRESKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDA 745
             + L+ +   + +    +   ++D + ++G  E+A  ++   + K + P+ 
Sbjct: 439 AMALLKAIEGSNWDPDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQPNV 490



 Score = 94.7 bits (234), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 66/220 (30%), Positives = 115/220 (52%), Gaps = 4/220 (1%)

Query: 336 QLQDHTVALGFFNWLRRQAGFKHDEHTYTTMV-GILGRARQFGAINKLLDQMVRDGCQPN 394
           ++Q    A+  F  + RQ     +  TY T++ G+    R   AI+ L  +MV  G  P+
Sbjct: 362 KIQSVDKAMYLFEEMSRQE-LTPNTVTYNTLIHGLCHVGRLQDAIS-LFHEMVARGQIPD 419

Query: 395 VVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYK 454
           +VTY  L     +  +L++A+ + K ++    +PD   Y T++D   +AG L+ A D++ 
Sbjct: 420 LVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRAGELEDARDLFS 479

Query: 455 KMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKAR 514
            + + GL P+ +TY+++I+ L K G L  A +LF EM   GC PN  TYN++     +  
Sbjct: 480 NLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCSPNDCTYNLITRGFLRNN 539

Query: 515 NYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEA 554
                ++L  +M   GF  D  T ++++ +L   G LD++
Sbjct: 540 EALRTIELLEEMLARGFSVDVSTTTLLVGMLSDDG-LDQS 578



 Score = 84.0 bits (206), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 64/266 (24%), Positives = 116/266 (43%)

Query: 481 LQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSI 540
           L  A   F  M+++   P+ V +N ++   AK +++ + L L R M + G  PD  T +I
Sbjct: 51  LDEALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVYTLAI 110

Query: 541 VMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAG 600
           V+  L H   +D A +  A++ +    PD   +  L+      G + +A   ++ M+  G
Sbjct: 111 VINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEG 170

Query: 601 LRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMG 660
            +PNV T  +L++   +VG  S A  LL+ M     +P++  ++ L+    + R   +  
Sbjct: 171 FQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNVVVFSTLIDSLCKDRQVTEAF 230

Query: 661 FCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRESKRGLVDAVVDFL 720
                M   G   ++   +    G        HV + +  M           ++ VVD L
Sbjct: 231 NIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDAL 290

Query: 721 HKSGLKEEAGSVWEVAAQKNVYPDAV 746
            K G+  EA  V ++   + V P+ V
Sbjct: 291 CKEGMVAEAHDVVDMMIHRGVEPNVV 316


>gi|51971677|dbj|BAD44503.1| hypothetical protein [Arabidopsis thaliana]
          Length = 447

 Score =  147 bits (371), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 99/331 (29%), Positives = 163/331 (49%), Gaps = 10/331 (3%)

Query: 330 ANQVLKQLQDH-TVALGFFNWL-RRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMV 387
            N VLK+L +H   AL FF++L      + HD  ++   + I  R      +  L+ +M 
Sbjct: 53  VNSVLKRLWNHGPKALQFFHFLDNHHREYVHDASSFDLAIDIAARLHLHPTVWSLIHRMR 112

Query: 388 RDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLD 447
                P+  T+  +   Y  A   ++A+ +F  M   GC  D  ++ T++D+  K+  ++
Sbjct: 113 SLRIGPSPKTFAIVAERYASAGKPDKAVKLFLNMHEHGCFQDLASFNTILDVLCKSKRVE 172

Query: 448 VAMDMYKKMQAAGLSPDTFTYSVIIN--CLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNI 505
            A ++++ ++    S DT TY+VI+N  CL K        ++  EMV +G  PNL TYN 
Sbjct: 173 KAYELFRALRGR-FSVDTVTYNVILNGWCLIK--RTPKTLEVLKEMVERGINPNLTTYNT 229

Query: 506 MIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKN 565
           M+    +A   + A + + +M+    E D VTY+ V+   G  G +  A  VF EM R+ 
Sbjct: 230 MLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIREG 289

Query: 566 WVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAY 625
            +P    Y  ++ +  K  NV  A   +E M++ G  PNV T N L+      G+ S   
Sbjct: 290 VLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGLFHAGEFSRGE 349

Query: 626 HLLQGMLNLGLKPSLQTYTLLL---SCCTEA 653
            L+Q M N G +P+ QTY +++   S C+E 
Sbjct: 350 ELMQRMENEGCEPNFQTYNMMIRYYSECSEV 380



 Score =  125 bits (313), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 69/266 (25%), Positives = 136/266 (51%), Gaps = 2/266 (0%)

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
           + G   D  ++ T++ +L ++++     +L  + +R     + VTYN +++ +       
Sbjct: 148 EHGCFQDLASFNTILDVLCKSKRVEKAYELF-RALRGRFSVDTVTYNVILNGWCLIKRTP 206

Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
           + L+V K+M   G  P+  TY T++    +AG +  A + + +M+      D  TY+ ++
Sbjct: 207 KTLEVLKEMVERGINPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVV 266

Query: 473 NCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFE 532
           +  G AG ++ A  +F EM+ +G +P++ TYN MI +  K  N ++A+ ++ +M   G+E
Sbjct: 267 HGFGVAGEIKRARNVFDEMIREGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRGYE 326

Query: 533 PDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEW 592
           P+  TY++++  L H G     E +   M  +   P+   Y +++  + +   V KA   
Sbjct: 327 PNVTTYNVLIRGLFHAGEFSRGEELMQRMENEGCEPNFQTYNMMIRYYSECSEVEKALGL 386

Query: 593 YEAMLQAGLRPNVPTCNSLLSA-FLR 617
           +E M      PN+ T N L+S  F+R
Sbjct: 387 FEKMGSGDCLPNLDTYNILISGMFVR 412


>gi|359481971|ref|XP_003632699.1| PREDICTED: pentatricopeptide repeat-containing protein At5g12100,
           mitochondrial-like [Vitis vinifera]
          Length = 819

 Score =  147 bits (371), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 90/281 (32%), Positives = 144/281 (51%), Gaps = 4/281 (1%)

Query: 375 QFGAINK---LLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRV 431
           Q G INK    +++M   G +PN VTYN L+  +     + EA    K+M   G  P+  
Sbjct: 404 QVGDINKAYTTIEKMEAVGLRPNHVTYNSLVKKFCEMKNMEEAEKCIKKMVEKGVLPNVE 463

Query: 432 TYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEM 491
           TY TLID + ++   D    + ++M+  GL P+  +Y  +INCL K  ++  A  +  +M
Sbjct: 464 TYNTLIDGYGRSCLFDRCFQILEEMEKKGLKPNVISYGCLINCLCKDANILEAEVILGDM 523

Query: 492 VNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYL 551
           V++G +PN   YN++I     A   + A + + +M      P  VTY+I++  L   G +
Sbjct: 524 VHRGVVPNAQIYNMLIDGSCIAGKLKDAFRFFDEMVAREIVPTLVTYNILINGLCKKGKV 583

Query: 552 DEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSL 611
            EAE + +E+ RK    D   Y  L+  +  AGNV+KA E YE M ++G++P + T + L
Sbjct: 584 MEAENLASEITRKGLSFDVITYNSLISGYSSAGNVQKALELYETMKKSGIKPTLNTYHRL 643

Query: 612 LSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTE 652
           ++   + G L     + Q ML + L P    Y  L+ C  E
Sbjct: 644 IAGCGKEG-LVLVEKIYQEMLQMNLVPDRVIYNALIHCYVE 683



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 91/295 (30%), Positives = 152/295 (51%), Gaps = 1/295 (0%)

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
           + G   +  TY T++   GR+  F    ++L++M + G +PNV++Y  LI+   +   + 
Sbjct: 455 EKGVLPNVETYNTLIDGYGRSCLFDRCFQILEEMEKKGLKPNVISYGCLINCLCKDANIL 514

Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
           EA  +   M   G  P+   Y  LID    AG L  A   + +M A  + P   TY+++I
Sbjct: 515 EAEVILGDMVHRGVVPNAQIYNMLIDGSCIAGKLKDAFRFFDEMVAREIVPTLVTYNILI 574

Query: 473 NCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFE 532
           N L K G +  A  L  E+  +G   +++TYN +I+  + A N Q AL+LY  M+ +G +
Sbjct: 575 NGLCKKGKVMEAENLASEITRKGLSFDVITYNSLISGYSSAGNVQKALELYETMKKSGIK 634

Query: 533 PDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEW 592
           P   TY  ++   G  G L   E ++ EM + N VPD  +Y  L+  + + G+V+KA   
Sbjct: 635 PTLNTYHRLIAGCGKEG-LVLVEKIYQEMLQMNLVPDRVIYNALIHCYVEHGDVQKACSL 693

Query: 593 YEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
           + AM   G++P+  T N L+    + G++    +L+  M   GL P  +TY +L+
Sbjct: 694 HSAMEAQGIQPDKMTYNCLILGHFKEGRMHKVKNLVNDMKIRGLIPKTETYDILI 748



 Score =  137 bits (346), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 74/286 (25%), Positives = 147/286 (51%)

Query: 362 TYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQM 421
           TY T++    +  Q      + ++M  +  +P ++T+N L++   RA  + EA  V ++M
Sbjct: 254 TYNTLIDGYCKVGQLEEAFNIRERMKVENVEPTIITFNSLLNGLCRAQMMEEAQRVLEEM 313

Query: 422 QVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHL 481
           +V G  PDR TY TL D H K G +D ++ + ++    G+    +T S+++N L K G++
Sbjct: 314 EVYGFVPDRFTYTTLFDGHLKCGNVDASITLSEEAVRKGVQILDYTCSILLNALCKEGNM 373

Query: 482 QAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIV 541
           + A ++  + +  G  P  V +N ++    +  +   A      M+  G  P+ VTY+ +
Sbjct: 374 EKAEEVLKKFLENGLAPVGVFFNTIVNGYCQVGDINKAYTTIEKMEAVGLRPNHVTYNSL 433

Query: 542 MEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGL 601
           ++       ++EAE    +M  K  +P+   Y  L+D +G++    + ++  E M + GL
Sbjct: 434 VKKFCEMKNMEEAEKCIKKMVEKGVLPNVETYNTLIDGYGRSCLFDRCFQILEEMEKKGL 493

Query: 602 RPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
           +PNV +   L++   +   + +A  +L  M++ G+ P+ Q Y +L+
Sbjct: 494 KPNVISYGCLINCLCKDANILEAEVILGDMVHRGVVPNAQIYNMLI 539



 Score =  126 bits (317), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 81/300 (27%), Positives = 148/300 (49%), Gaps = 4/300 (1%)

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
           + G +  ++T + ++  L +        ++L + + +G  P  V +N +++ Y +   +N
Sbjct: 350 RKGVQILDYTCSILLNALCKEGNMEKAEEVLKKFLENGLAPVGVFFNTIVNGYCQVGDIN 409

Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
           +A    ++M+ VG  P+ VTY +L+    +   ++ A    KKM   G+ P+  TY+ +I
Sbjct: 410 KAYTTIEKMEAVGLRPNHVTYNSLVKKFCEMKNMEEAEKCIKKMVEKGVLPNVETYNTLI 469

Query: 473 NCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFE 532
           +  G++       Q+  EM  +G  PN+++Y  +I    K  N   A  +  DM + G  
Sbjct: 470 DGYGRSCLFDRCFQILEEMEKKGLKPNVISYGCLINCLCKDANILEAEVILGDMVHRGVV 529

Query: 533 PDKVTYSIVMEVLGHC--GYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAW 590
           P+   Y+++++  G C  G L +A   F EM  +  VP    Y +L++   K G V +A 
Sbjct: 530 PNAQIYNMLID--GSCIAGKLKDAFRFFDEMVAREIVPTLVTYNILINGLCKKGKVMEAE 587

Query: 591 EWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCC 650
                + + GL  +V T NSL+S +   G +  A  L + M   G+KP+L TY  L++ C
Sbjct: 588 NLASEITRKGLSFDVITYNSLISGYSSAGNVQKALELYETMKKSGIKPTLNTYHRLIAGC 647



 Score =  124 bits (310), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 96/395 (24%), Positives = 174/395 (44%), Gaps = 28/395 (7%)

Query: 366 MVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVG 425
           ++ I   ++      +L   M +DG  P+V + N  + S        + L +F ++   G
Sbjct: 118 LLSICSESKMVSESAELYMLMKKDGVLPSVASLNLFLESLVSTKRYEDTLQLFSEIVESG 177

Query: 426 CEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAH 485
             PD+  Y   I    K G L  A+++   M+  G+SP  F Y+V+I  L K   ++ A 
Sbjct: 178 LRPDQFMYGKAIQAAVKLGDLKRAIELMTCMKRGGVSPGVFVYNVVIGGLCKEKRMKDAE 237

Query: 486 QLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVL 545
           +LF EM+++   PN +TYN +I    K    + A  +   M+    EP  +T++ ++  L
Sbjct: 238 KLFDEMLDRRVAPNRITYNTLIDGYCKVGQLEEAFNIRERMKVENVEPTIITFNSLLNGL 297

Query: 546 GHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNV 605
                ++EA+ V  EM    +VPD   Y  L D   K GNV  +    E  ++ G++   
Sbjct: 298 CRAQMMEEAQRVLEEMEVYGFVPDRFTYTTLFDGHLKCGNVDASITLSEEAVRKGVQILD 357

Query: 606 PTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGFCHEL 665
            TC+ LL+A  + G +  A  +L+  L  GL P    +  +++           G+C   
Sbjct: 358 YTCSILLNALCKEGNMEKAEEVLKKFLENGLAPVGVFFNTIVN-----------GYCQ-- 404

Query: 666 MAVSGHPAHMFLLSMPSPG--PDGQNVRDHVGSFLEMMHSEDRES------KRGLV---- 713
                + A+  +  M + G  P+       V  F EM + E+ E       ++G++    
Sbjct: 405 -VGDINKAYTTIEKMEAVGLRPNHVTYNSLVKKFCEMKNMEEAEKCIKKMVEKGVLPNVE 463

Query: 714 --DAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAV 746
             + ++D   +S L +    + E   +K + P+ +
Sbjct: 464 TYNTLIDGYGRSCLFDRCFQILEEMEKKGLKPNVI 498



 Score =  122 bits (306), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 73/294 (24%), Positives = 150/294 (51%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           GF  D  TYTT+     +     A   L ++ VR G Q    T + L+++  +   + +A
Sbjct: 317 GFVPDRFTYTTLFDGHLKCGNVDASITLSEEAVRKGVQILDYTCSILLNALCKEGNMEKA 376

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
            +V K+    G  P  V + T+++ + + G ++ A    +KM+A GL P+  TY+ ++  
Sbjct: 377 EEVLKKFLENGLAPVGVFFNTIVNGYCQVGDINKAYTTIEKMEAVGLRPNHVTYNSLVKK 436

Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPD 534
             +  +++ A +   +MV +G +PN+ TYN +I    ++  +    ++  +M+  G +P+
Sbjct: 437 FCEMKNMEEAEKCIKKMVEKGVLPNVETYNTLIDGYGRSCLFDRCFQILEEMEKKGLKPN 496

Query: 535 KVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYE 594
            ++Y  ++  L     + EAE +  +M  +  VP+  +Y +L+D    AG ++ A+ +++
Sbjct: 497 VISYGCLINCLCKDANILEAEVILGDMVHRGVVPNAQIYNMLIDGSCIAGKLKDAFRFFD 556

Query: 595 AMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
            M+   + P + T N L++   + G++ +A +L   +   GL   + TY  L+S
Sbjct: 557 EMVAREIVPTLVTYNILINGLCKKGKVMEAENLASEITRKGLSFDVITYNSLIS 610



 Score = 88.6 bits (218), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 59/212 (27%), Positives = 99/212 (46%), Gaps = 1/212 (0%)

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
           + G   D  TY +++     A       +L + M + G +P + TY+RLI   G+   L 
Sbjct: 595 RKGLSFDVITYNSLISGYSSAGNVQKALELYETMKKSGIKPTLNTYHRLIAGCGKEG-LV 653

Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
               ++++M  +   PDRV Y  LI  + + G +  A  ++  M+A G+ PD  TY+ +I
Sbjct: 654 LVEKIYQEMLQMNLVPDRVIYNALIHCYVEHGDVQKACSLHSAMEAQGIQPDKMTYNCLI 713

Query: 473 NCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFE 532
               K G +     L  +M  +G IP   TY+I+I    K +++  A   YR+M   GF 
Sbjct: 714 LGHFKEGRMHKVKNLVNDMKIRGLIPKTETYDILIVGHCKLKDFDGAYVWYREMFENGFT 773

Query: 533 PDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRK 564
           P       ++  L   G   +A+ + +EM  K
Sbjct: 774 PSVSICDNLITGLREEGRSHDADVICSEMNMK 805



 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 31/144 (21%), Positives = 71/144 (49%)

Query: 504 NIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRR 563
           ++++++ ++++    + +LY  M+  G  P   + ++ +E L      ++   +F+E+  
Sbjct: 116 DMLLSICSESKMVSESAELYMLMKKDGVLPSVASLNLFLESLVSTKRYEDTLQLFSEIVE 175

Query: 564 KNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSD 623
               PD+ +YG  +    K G++++A E    M + G+ P V   N ++    +  ++ D
Sbjct: 176 SGLRPDQFMYGKAIQAAVKLGDLKRAIELMTCMKRGGVSPGVFVYNVVIGGLCKEKRMKD 235

Query: 624 AYHLLQGMLNLGLKPSLQTYTLLL 647
           A  L   ML+  + P+  TY  L+
Sbjct: 236 AEKLFDEMLDRRVAPNRITYNTLI 259



 Score = 42.4 bits (98), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 31/110 (28%), Positives = 49/110 (44%)

Query: 386 MVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGF 445
           M   G QP+ +TYN LI  + +   +++  ++   M++ G  P   TY  LI  H K   
Sbjct: 697 MEAQGIQPDKMTYNCLILGHFKEGRMHKVKNLVNDMKIRGLIPKTETYDILIVGHCKLKD 756

Query: 446 LDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQG 495
            D A   Y++M   G +P       +I  L + G    A  +  EM  +G
Sbjct: 757 FDGAYVWYREMFENGFTPSVSICDNLITGLREEGRSHDADVICSEMNMKG 806


>gi|125556563|gb|EAZ02169.1| hypothetical protein OsI_24261 [Oryza sativa Indica Group]
          Length = 991

 Score =  147 bits (371), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 96/321 (29%), Positives = 149/321 (46%), Gaps = 19/321 (5%)

Query: 350 LRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRAN 409
           +  Q G K DEH Y  +   L +A   G   +    +VR G     V Y  LI  + +A 
Sbjct: 557 MMEQNGLKPDEHAYAVLTDALCKA---GRAEEAYSFIVRKGVALTKVYYTTLIDGFSKAG 613

Query: 410 YLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYS 469
             + A  + ++M   GC PD  TY  L+    K   L+ A+ +  +M   G+    F Y+
Sbjct: 614 NTDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRGIKCTIFAYT 673

Query: 470 VIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNA 529
           ++I+ + + G    A +++ EM + G  P+  TY + I    K    + A  L   M+  
Sbjct: 674 ILIDEMLREGKHDHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGRLEDAEDLILKMERE 733

Query: 530 GFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVD--LWGKAGNVR 587
           G  PD VTY+I+++  GH GY+D A +    M   +  P+   Y LL+   L G    VR
Sbjct: 734 GVAPDVVTYNILIDGCGHMGYIDRAFSTLKRMVGASCEPNYWTYCLLLKHLLKGNLAYVR 793

Query: 588 KA--------------WEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLN 633
                           W+  E M++ GL P V T +SL++ F + G+L +A  LL  M  
Sbjct: 794 SVDTSGMWNLIELDITWQLLERMVKHGLNPTVTTYSSLIAGFCKAGRLEEACLLLDHMCG 853

Query: 634 LGLKPSLQTYTLLLSCCTEAR 654
            GL P+   YTLL+ CC + +
Sbjct: 854 KGLSPNEDIYTLLIKCCCDTK 874



 Score =  140 bits (353), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 81/295 (27%), Positives = 156/295 (52%), Gaps = 3/295 (1%)

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
           + GF     T+T ++     A +F    ++ ++M+   C+ ++  + +LI+S  + + L 
Sbjct: 385 KEGFTPTVVTFTNLINGYCMAEKFDDALRMKNKMMSSKCKLDLQVFGKLINSLIKKDRLK 444

Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
           EA ++  ++   G  P+ +TY ++ID + K+G +D+A+++ K M+  G  P+ +TY+ ++
Sbjct: 445 EAKELLNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMMERDGCQPNAWTYNSLM 504

Query: 473 NCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFE 532
             L K   L  A  L  +M   G IPN++TY  ++  Q    ++ +A +L+  M+  G +
Sbjct: 505 YGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDEHDFDNAFRLFEMMEQNGLK 564

Query: 533 PDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEW 592
           PD+  Y+++ + L   G    AE  ++ + RK     +  Y  L+D + KAGN   A   
Sbjct: 565 PDEHAYAVLTDALCKAG---RAEEAYSFIVRKGVALTKVYYTTLIDGFSKAGNTDFAATL 621

Query: 593 YEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
            E M+  G  P+  T + LL A  +  +L++A  +L  M   G+K ++  YT+L+
Sbjct: 622 IERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRGIKCTIFAYTILI 676



 Score =  129 bits (324), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 106/400 (26%), Positives = 179/400 (44%), Gaps = 10/400 (2%)

Query: 350 LRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRAN 409
           L  + G   D+ TY T++  L   +   A  +LL+  V++G  P VVT+  LI+ Y  A 
Sbjct: 348 LMEKNGCHPDDWTYNTLIYGLCDQKTEEA-EELLNNAVKEGFTPTVVTFTNLINGYCMAE 406

Query: 410 YLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYS 469
             ++AL +  +M    C+ D   +  LI+   K   L  A ++  ++ A GL P+  TY+
Sbjct: 407 KFDDALRMKNKMMSSKCKLDLQVFGKLINSLIKKDRLKEAKELLNEISANGLVPNVITYT 466

Query: 470 VIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNA 529
            II+   K+G +  A ++   M   GC PN  TYN ++    K +    A+ L   MQ  
Sbjct: 467 SIIDGYCKSGKVDIALEVLKMMERDGCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKD 526

Query: 530 GFEPDKVTYSIVMEVLGHCGY--LDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVR 587
           G  P+ +TY+ +++  G C     D A  +F  M +    PDE  Y +L D   KAG   
Sbjct: 527 GIIPNVITYTTLLQ--GQCDEHDFDNAFRLFEMMEQNGLKPDEHAYAVLTDALCKAG--- 581

Query: 588 KAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
           +A E Y  +++ G+        +L+  F + G    A  L++ M++ G  P   TY++LL
Sbjct: 582 RAEEAYSFIVRKGVALTKVYYTTLIDGFSKAGNTDFAATLIERMIDEGCTPDSYTYSVLL 641

Query: 648 -SCCTEARSPYDMGFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDR 706
            + C + R    +    + M++ G    +F  ++       +   DH       M S   
Sbjct: 642 HALCKQKRLNEALPILDQ-MSLRGIKCTIFAYTILIDEMLREGKHDHAKRMYNEMTSSGH 700

Query: 707 ESKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAV 746
           +         ++   K G  E+A  +     ++ V PD V
Sbjct: 701 KPSATTYTVFINSYCKEGRLEDAEDLILKMEREGVAPDVV 740



 Score =  112 bits (280), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 97/380 (25%), Positives = 164/380 (43%), Gaps = 31/380 (8%)

Query: 296 NVVESVSRIL--RQWKWGPLAEEALGNTN--YSMDAYQANQVLKQLQDHTVALGFFNWLR 351
           +VV  + RIL  R+W  G   +    +    +  D ++A     +      AL FF WL 
Sbjct: 25  DVVAELGRILSTRRWNKGRAYKRLAPSVTAAHVADLFRAESTAPE---PATALAFFEWLA 81

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVR------------DGCQPNVVT-- 397
           R+ GF+H   ++  ++ +L R R      +L+  M+             D  Q    T  
Sbjct: 82  RRDGFRHTADSHAALLHLLSRRRAPAQYERLVVSMLNCSDTAEDMRVSADAIQAIRRTGS 141

Query: 398 ---------YNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDV 448
                    YN  + S  R +       V+ Q+   G  PD VTY T+I  + K G L  
Sbjct: 142 ARLALSPKCYNFALRSLARFDMTEYMGRVYSQLVQDGLLPDTVTYNTMIKSYCKEGDLTT 201

Query: 449 AMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIA 508
           A   ++ +   GL P+TFT + ++    + G L+ A  LF  M   GC  N  +Y I+I 
Sbjct: 202 AHRCFRLLLEGGLEPETFTCNALVLGYCRTGELRKACWLFLMMPLMGCQRNEYSYTILIQ 261

Query: 509 LQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVP 568
              +A+  + AL L+  M+  G  P+   ++ ++  L   G + +A  +F  M +   VP
Sbjct: 262 GLCEAKCVREALVLFLMMKRDGCSPNVRAFTFLISGLCKSGRVGDARLLFDAMPQNGVVP 321

Query: 569 DEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLL 628
               Y  ++  + K G +  A +  E M + G  P+  T N+L+       +  +A  LL
Sbjct: 322 SVMTYNAMIVGYSKLGRMNDALKIKELMEKNGCHPDDWTYNTLIYGLCD-QKTEEAEELL 380

Query: 629 QGMLNLGLKPSLQTYTLLLS 648
              +  G  P++ T+T L++
Sbjct: 381 NNAVKEGFTPTVVTFTNLIN 400



 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 98/415 (23%), Positives = 171/415 (41%), Gaps = 38/415 (9%)

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
           Q G   D  TY TM+    +       ++    ++  G +P   T N L+  Y R   L 
Sbjct: 176 QDGLLPDTVTYNTMIKSYCKEGDLTTAHRCFRLLLEGGLEPETFTCNALVLGYCRTGELR 235

Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
           +A  +F  M ++GC+ +  +Y  LI    +A  +  A+ ++  M+  G SP+   ++ +I
Sbjct: 236 KACWLFLMMPLMGCQRNEYSYTILIQGLCEAKCVREALVLFLMMKRDGCSPNVRAFTFLI 295

Query: 473 NCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFE 532
           + L K+G +  A  LF  M   G +P+++TYN MI   +K      ALK+   M+  G  
Sbjct: 296 SGLCKSGRVGDARLLFDAMPQNGVVPSVMTYNAMIVGYSKLGRMNDALKIKELMEKNGCH 355

Query: 533 PDKVTYSIVMEVLGHCGY-LDEAEAVFAEMRRKNWVP----------------------- 568
           PD  TY+ +  + G C    +EAE +     ++ + P                       
Sbjct: 356 PDDWTYNTL--IYGLCDQKTEEAEELLNNAVKEGFTPTVVTFTNLINGYCMAEKFDDALR 413

Query: 569 ------------DEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFL 616
                       D  V+G L++   K   +++A E    +   GL PNV T  S++  + 
Sbjct: 414 MKNKMMSSKCKLDLQVFGKLINSLIKKDRLKEAKELLNEISANGLVPNVITYTSIIDGYC 473

Query: 617 RVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGFCHELMAVSGHPAHMF 676
           + G++  A  +L+ M   G +P+  TY  L+    + +  +        M   G   ++ 
Sbjct: 474 KSGKVDIALEVLKMMERDGCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVI 533

Query: 677 LLSMPSPGPDGQNVRDHVGSFLEMMHSEDRESKRGLVDAVVDFLHKSGLKEEAGS 731
             +    G   ++  D+     EMM     +        + D L K+G  EEA S
Sbjct: 534 TYTTLLQGQCDEHDFDNAFRLFEMMEQNGLKPDEHAYAVLTDALCKAGRAEEAYS 588



 Score =  108 bits (269), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 71/259 (27%), Positives = 115/259 (44%), Gaps = 16/259 (6%)

Query: 354 AGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNE 413
           +G K    TYT  +    +  +      L+ +M R+G  P+VVTYN LI   G   Y++ 
Sbjct: 698 SGHKPSATTYTVFINSYCKEGRLEDAEDLILKMEREGVAPDVVTYNILIDGCGHMGYIDR 757

Query: 414 ALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGF----------------LDVAMDMYKKMQ 457
           A    K+M    CEP+  TYC L+    K                   LD+   + ++M 
Sbjct: 758 AFSTLKRMVGASCEPNYWTYCLLLKHLLKGNLAYVRSVDTSGMWNLIELDITWQLLERMV 817

Query: 458 AAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQ 517
             GL+P   TYS +I    KAG L+ A  L   M  +G  PN   Y ++I      + ++
Sbjct: 818 KHGLNPTVTTYSSLIAGFCKAGRLEEACLLLDHMCGKGLSPNEDIYTLLIKCCCDTKFFE 877

Query: 518 SALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLV 577
            AL     M   GF+P   +Y +++  L + G  ++ +++F ++    +  DE  + +L 
Sbjct: 878 KALSFVSIMSECGFQPQLESYRLLVVGLCNEGDFEKVKSLFCDLLELGYNHDEVAWKILN 937

Query: 578 DLWGKAGNVRKAWEWYEAM 596
           D   KAG V   ++    M
Sbjct: 938 DGLLKAGYVDICFQMLSIM 956



 Score =  106 bits (264), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 79/324 (24%), Positives = 129/324 (39%), Gaps = 51/324 (15%)

Query: 363 YTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQ 422
           YTT++    +A        L+++M+ +GC P+  TY+ L+H+  +   LNEAL +  QM 
Sbjct: 602 YTTLIDGFSKAGNTDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMS 661

Query: 423 VVGCE-----------------------------------PDRVTYCTLIDIHAKAGFLD 447
           + G +                                   P   TY   I+ + K G L+
Sbjct: 662 LRGIKCTIFAYTILIDEMLREGKHDHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGRLE 721

Query: 448 VAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMI 507
            A D+  KM+  G++PD  TY+++I+  G  G++  A      MV   C PN  TY +++
Sbjct: 722 DAEDLILKMEREGVAPDVVTYNILIDGCGHMGYIDRAFSTLKRMVGASCEPNYWTYCLLL 781

Query: 508 ALQAK-----ARNYQSA-----------LKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYL 551
               K      R+  ++            +L   M   G  P   TYS ++      G L
Sbjct: 782 KHLLKGNLAYVRSVDTSGMWNLIELDITWQLLERMVKHGLNPTVTTYSSLIAGFCKAGRL 841

Query: 552 DEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSL 611
           +EA  +   M  K   P+E +Y LL+          KA  +   M + G +P + +   L
Sbjct: 842 EEACLLLDHMCGKGLSPNEDIYTLLIKCCCDTKFFEKALSFVSIMSECGFQPQLESYRLL 901

Query: 612 LSAFLRVGQLSDAYHLLQGMLNLG 635
           +      G       L   +L LG
Sbjct: 902 VVGLCNEGDFEKVKSLFCDLLELG 925


>gi|238908350|emb|CAZ40335.1| non restoring pentatricopeptide repeat [Raphanus sativus]
          Length = 683

 Score =  147 bits (371), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 95/307 (30%), Positives = 155/307 (50%), Gaps = 15/307 (4%)

Query: 338 QDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVT 397
           QD   A     +L    G   D  T+TT++     A++     +LL +M R G   N VT
Sbjct: 371 QDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVT 430

Query: 398 YNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQ 457
           YN LIH +     LN ALD+ +QM   G  PD VT  TL+D     G L  A++M+K MQ
Sbjct: 431 YNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQ 490

Query: 458 AA-----------GLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIM 506
            +           G+ PD  TY+++I  L   G    A +L+ EM ++G +P+ +TY+ M
Sbjct: 491 KSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSM 550

Query: 507 IALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHC--GYLDEAEAVFAEMRRK 564
           I    K      A +++  M +  F P+ VT++ ++   G+C  G +D+   +F EM R+
Sbjct: 551 IDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLIN--GYCKAGRVDDGLELFCEMGRR 608

Query: 565 NWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDA 624
             V D  +Y  L+  + K GN+  A + ++ M+ +G+ P+  T  ++L+ F    +L  A
Sbjct: 609 GIVADAIIYITLIYGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGFWSKEELERA 668

Query: 625 YHLLQGM 631
             +L+ +
Sbjct: 669 VAMLEDL 675



 Score =  131 bits (330), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 87/309 (28%), Positives = 153/309 (49%), Gaps = 16/309 (5%)

Query: 353 QAGFKHDEHTYTTMV-GILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           + G + D+ TY T V G+        A+N L         +PNVV Y+ +I    +    
Sbjct: 210 ENGLQPDQITYGTFVDGMCKMGDTVSALNLLRKMEEISHIKPNVVIYSAIIDGLCKDGRH 269

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
           +++ ++F +MQ  G  P+ VTY  +I     +G    A  + ++M    +SP+  TY+ +
Sbjct: 270 SDSHNLFIEMQDKGIFPNIVTYNCMIGGFCISGRWSAAQRLLQEMLERKISPNVVTYNAL 329

Query: 472 INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF 531
           IN   K G    A +L+ EM+ +G IPN +TYN MI    K     +A  ++  M   G 
Sbjct: 330 INAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGC 389

Query: 532 EPDKVTYSIVMEVLGHCG--YLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKA 589
            PD  T++ +++  G+CG   +D+   +  EM R+  V +   Y  L+  +   G++  A
Sbjct: 390 SPDVFTFTTLID--GYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAA 447

Query: 590 WEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGM----LNL-------GLKP 638
            +  + M+ +G+ P++ TCN+LL      G+L DA  + + M    ++L       G++P
Sbjct: 448 LDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEP 507

Query: 639 SLQTYTLLL 647
            + TY +L+
Sbjct: 508 DVLTYNILI 516



 Score =  130 bits (327), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 87/306 (28%), Positives = 148/306 (48%), Gaps = 6/306 (1%)

Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLI 402
           AL  F  L +  G   D  T+TT++  L    +      L  Q+    C+P+V+T+  L+
Sbjct: 135 ALSTFGKLTK-LGLHPDVVTFTTLLHGLCLDHRVSEALDLFHQI----CRPDVLTFTTLM 189

Query: 403 HSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAG-L 461
           +   R   + EA+ +  +M   G +PD++TY T +D   K G    A+++ +KM+    +
Sbjct: 190 NGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGMCKMGDTVSALNLLRKMEEISHI 249

Query: 462 SPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALK 521
            P+   YS II+ L K G    +H LF EM ++G  PN+VTYN MI     +  + +A +
Sbjct: 250 KPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGGFCISGRWSAAQR 309

Query: 522 LYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWG 581
           L ++M      P+ VTY+ ++      G   EA  ++ EM  +  +P+   Y  ++D + 
Sbjct: 310 LLQEMLERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFC 369

Query: 582 KAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQ 641
           K   +  A + +  M   G  P+V T  +L+  +    ++ D   LL  M   GL  +  
Sbjct: 370 KQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTV 429

Query: 642 TYTLLL 647
           TY  L+
Sbjct: 430 TYNTLI 435



 Score =  119 bits (297), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 103/439 (23%), Positives = 188/439 (42%), Gaps = 27/439 (6%)

Query: 336 QLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNV 395
           ++ D   AL     +   +  K +   Y+ ++  L +  +    + L  +M   G  PN+
Sbjct: 229 KMGDTVSALNLLRKMEEISHIKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNI 288

Query: 396 VTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKK 455
           VTYN +I  +  +   + A  + ++M      P+ VTY  LI+   K G    A ++Y +
Sbjct: 289 VTYNCMIGGFCISGRWSAAQRLLQEMLERKISPNVVTYNALINAFVKEGKFFEAAELYDE 348

Query: 456 MQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARN 515
           M   G+ P+T TY+ +I+   K   L AA  +F  M  +GC P++ T+  +I     A+ 
Sbjct: 349 MLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKR 408

Query: 516 YQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGL 575
               ++L  +M   G   + VTY+ ++      G L+ A  +  +M      PD      
Sbjct: 409 IDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNT 468

Query: 576 LVDLWGKAGNVRKAWEWYEAMLQA-----------GLRPNVPTCNSLLSAFLRVGQLSDA 624
           L+D     G ++ A E ++AM ++           G+ P+V T N L+   +  G+  +A
Sbjct: 469 LLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEA 528

Query: 625 YHLLQGMLNLGLKPSLQTYTLLLS-CCTEARSPYDMGFCHELMAVSGHPAHMFLLSMPSP 683
             L + M + G+ P   TY+ ++   C ++R          + + S  P  +   ++ + 
Sbjct: 529 EELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLING 588

Query: 684 GPDGQNVRDHVGSFLEMMHSEDRESKRGLV-DAVVDF-----LHKSGLKEEAGSVWEVAA 737
                 V D +  F EM        +RG+V DA++         K G    A  +++   
Sbjct: 589 YCKAGRVDDGLELFCEM-------GRRGIVADAIIYITLIYGFRKVGNINGALDIFQEMI 641

Query: 738 QKNVYPDAVKEKGM--SYW 754
              VYPD +  + M   +W
Sbjct: 642 SSGVYPDTITIRNMLTGFW 660



 Score =  117 bits (292), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 100/394 (25%), Positives = 181/394 (45%), Gaps = 23/394 (5%)

Query: 363 YTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQ 422
           +  ++G + R  +   +  L  +M R   + ++ ++  LI  +   + L  AL  F ++ 
Sbjct: 84  FNKLMGAVVRMERPDLVISLYQKMERKQIRCDIYSFTILIKCFCSCSKLPFALSTFGKLT 143

Query: 423 VVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQ 482
            +G  PD VT+ TL+        +  A+D++ ++      PD  T++ ++N L + G + 
Sbjct: 144 KLGLHPDVVTFTTLLHGLCLDHRVSEALDLFHQI----CRPDVLTFTTLMNGLCREGRVV 199

Query: 483 AAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAG-FEPDKVTYSIV 541
            A  L   MV  G  P+ +TY   +    K  +  SAL L R M+     +P+ V YS +
Sbjct: 200 EAVALLDRMVENGLQPDQITYGTFVDGMCKMGDTVSALNLLRKMEEISHIKPNVVIYSAI 259

Query: 542 MEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGL 601
           ++ L   G   ++  +F EM+ K   P+   Y  ++  +  +G    A    + ML+  +
Sbjct: 260 IDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGGFCISGRWSAAQRLLQEMLERKI 319

Query: 602 RPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTY-TLLLSCCTEAR--SPYD 658
            PNV T N+L++AF++ G+  +A  L   ML  G+ P+  TY +++   C + R  +  D
Sbjct: 320 SPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAED 379

Query: 659 MGFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRESKRGLVDAVVD 718
           M +   LMA  G    +F  +    G  G      +   +E++H   R   RGLV   V 
Sbjct: 380 MFY---LMATKGCSPDVFTFTTLIDGYCGAK---RIDDGMELLHEMPR---RGLVANTVT 430

Query: 719 F---LHKSGLKEEAGSVWEVAAQ---KNVYPDAV 746
           +   +H   L  +  +  +++ Q     V PD V
Sbjct: 431 YNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIV 464



 Score = 79.0 bits (193), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 47/180 (26%), Positives = 87/180 (48%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           G + D  TY  ++  L    +F    +L ++M   G  P+ +TY+ +I    + + L+EA
Sbjct: 504 GVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEA 563

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
             +F  M      P+ VT+ TLI+ + KAG +D  ++++ +M   G+  D   Y  +I  
Sbjct: 564 TQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVADAIIYITLIYG 623

Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPD 534
             K G++  A  +F EM++ G  P+ +T   M+         + A+ +  D+Q    E +
Sbjct: 624 FRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGFWSKEELERAVAMLEDLQRYQLEDE 683



 Score = 56.6 bits (135), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 77/383 (20%), Positives = 136/383 (35%), Gaps = 99/383 (25%)

Query: 411 LNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSV 470
           L +A+D+F  M      P  + +  L+    +    D+ + +Y+KM+   +  D +++++
Sbjct: 62  LEDAIDLFSDMLRSRPLPSVIDFNKLMGAVVRMERPDLVISLYQKMERKQIRCDIYSFTI 121

Query: 471 IINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAG 530
           +I C             FC                             AL  +  +   G
Sbjct: 122 LIKC-------------FC----------------------SCSKLPFALSTFGKLTKLG 146

Query: 531 FEPDKVTYSIVMEVL-----------------------------GHC--GYLDEAEAVFA 559
             PD VT++ ++  L                             G C  G + EA A+  
Sbjct: 147 LHPDVVTFTTLLHGLCLDHRVSEALDLFHQICRPDVLTFTTLMNGLCREGRVVEAVALLD 206

Query: 560 EMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAG-LRPNVPTCNSLLSAFLRV 618
            M      PD+  YG  VD   K G+   A      M +   ++PNV   ++++    + 
Sbjct: 207 RMVENGLQPDQITYGTFVDGMCKMGDTVSALNLLRKMEEISHIKPNVVIYSAIIDGLCKD 266

Query: 619 GQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGFCHELMAVSGH--PAHMF 676
           G+ SD+++L   M + G+ P++ TY  ++            GFC     +SG    A   
Sbjct: 267 GRHSDSHNLFIEMQDKGIFPNIVTYNCMIG-----------GFC-----ISGRWSAAQRL 310

Query: 677 LLSM----PSPGPDGQNVRDHV----GSFLEMMHSEDRESKRGLV------DAVVDFLHK 722
           L  M     SP     N   +     G F E     D    RG++      ++++D   K
Sbjct: 311 LQEMLERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCK 370

Query: 723 SGLKEEAGSVWEVAAQKNVYPDA 745
               + A  ++ + A K   PD 
Sbjct: 371 QDRLDAAEDMFYLMATKGCSPDV 393


>gi|255555533|ref|XP_002518803.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223542184|gb|EEF43728.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 775

 Score =  147 bits (371), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 110/402 (27%), Positives = 179/402 (44%), Gaps = 56/402 (13%)

Query: 300 SVSRILRQWKWGPLAEEALGNTNYSMDAYQANQVLKQL-QDHTVALGFFNWLRRQAGFKH 358
           S+ +I++Q +W     + +   + S+     ++VL +L QD  +AL FF W + + GF  
Sbjct: 70  SIIKIIQQDQWND--PKFVRFIDSSLGPIWVSRVLVELKQDPKLALKFFRWAKTKFGFCL 127

Query: 359 DEHTYTTMVGILGRARQFGAINKLLDQMV------------------RDGCQPNVVTYNR 400
              +Y  +V IL  AR +   N  L +++                  R+ C P    ++ 
Sbjct: 128 TTESYCLLVHILFYARMYFDANFFLKELISSRRILPGFDVFEVLWSTRNVCVPGFGVFDA 187

Query: 401 LIHSYGRANYLNEALDVFKQMQVVGCEP--------------------------DRV--- 431
           L   +     L EA   F +M      P                          D V   
Sbjct: 188 LFSVFIELGMLEEAGQCFSRMTRFRVFPKARSCNAFLYRLAKTGKGDLSNKFFRDMVGAG 247

Query: 432 ------TYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAH 485
                 TY  +I    K G +  A  ++ +M+  GL+PD  TY+ +I+  GK G L  + 
Sbjct: 248 IAQSVFTYNIMIGYMCKEGDMVTAKSLFHQMKQMGLTPDIVTYNSLIDGYGKLGLLDESF 307

Query: 486 QLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVL 545
            LF EM + GC P+++TYN +I    K      A     +M+N+G +P+ VTYS +++ L
Sbjct: 308 CLFEEMKDVGCEPDVITYNALINCFCKYEQMPKAFHFLHEMKNSGLKPNVVTYSTLIDAL 367

Query: 546 GHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNV 605
                L +A     +MRR    P+E  Y  L+D   KAG +  A +  + MLQ  +  NV
Sbjct: 368 CKEHMLQQAIKFLLDMRRVGLSPNEFTYTSLIDANCKAGYLSDALKLADEMLQVQVGFNV 427

Query: 606 PTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
            T  +LL    + G++ +A  L + M+  G+ P+L+TYT L+
Sbjct: 428 VTYTTLLDGLCKEGRMMEAEDLFRAMIKAGVTPNLKTYTALV 469



 Score =  139 bits (351), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 110/428 (25%), Positives = 181/428 (42%), Gaps = 69/428 (16%)

Query: 354 AGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNE 413
           AG      TY  M+G + +         L  QM + G  P++VTYN LI  YG+   L+E
Sbjct: 246 AGIAQSVFTYNIMIGYMCKEGDMVTAKSLFHQMKQMGLTPDIVTYNSLIDGYGKLGLLDE 305

Query: 414 ALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIIN 473
           +  +F++M+ VGCEPD +TY  LI+   K   +  A     +M+ +GL P+  TYS +I+
Sbjct: 306 SFCLFEEMKDVGCEPDVITYNALINCFCKYEQMPKAFHFLHEMKNSGLKPNVVTYSTLID 365

Query: 474 CLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEP 533
            L K   LQ A +   +M   G  PN  TY  +I    KA     ALKL  +M       
Sbjct: 366 ALCKEHMLQQAIKFLLDMRRVGLSPNEFTYTSLIDANCKAGYLSDALKLADEMLQVQVGF 425

Query: 534 DKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVD--------------- 578
           + VTY+ +++ L   G + EAE +F  M +    P+   Y  LV                
Sbjct: 426 NVVTYTTLLDGLCKEGRMMEAEDLFRAMIKAGVTPNLKTYTALVHGHIKNKRVENALELL 485

Query: 579 ------------------LWGKAG-NVRKAWEWYEAMLQA-GLRPNVPTCNSLLSAFLRV 618
                             +WG    N  +  E+  + ++A G+R N       + A+ + 
Sbjct: 486 KEIKEKKIKPDLLLYGTIIWGLCSQNKLEECEFVMSEMKACGIRANSVIYTIRMDAYFKT 545

Query: 619 GQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGFCHELMAVSGHPAHMFLL 678
           G+  +A +LLQ M +LG++ ++ T+ +L+            G C + +            
Sbjct: 546 GKTVEALNLLQEMCDLGVEVTIVTFCVLID-----------GLCKKGL------------ 582

Query: 679 SMPSPGPDGQNVRDHVGSFLEMMHSEDRESKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQ 738
                      V + +  F  M     + +   +  A++D L K+   E A  +++    
Sbjct: 583 -----------VEEAIDYFARMADFNLQPNNVAVCTALIDGLCKNNYIEAAKKLFDEMQD 631

Query: 739 KNVYPDAV 746
           KN+ PD +
Sbjct: 632 KNMVPDKI 639



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 76/288 (26%), Positives = 138/288 (47%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           +  G + D  TY  ++    +  Q       L +M   G +PNVVTY+ LI +  + + L
Sbjct: 314 KDVGCEPDVITYNALINCFCKYEQMPKAFHFLHEMKNSGLKPNVVTYSTLIDALCKEHML 373

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
            +A+     M+ VG  P+  TY +LID + KAG+L  A+ +  +M    +  +  TY+ +
Sbjct: 374 QQAIKFLLDMRRVGLSPNEFTYTSLIDANCKAGYLSDALKLADEMLQVQVGFNVVTYTTL 433

Query: 472 INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF 531
           ++ L K G +  A  LF  M+  G  PNL TY  ++    K +  ++AL+L ++++    
Sbjct: 434 LDGLCKEGRMMEAEDLFRAMIKAGVTPNLKTYTALVHGHIKNKRVENALELLKEIKEKKI 493

Query: 532 EPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWE 591
           +PD + Y  ++  L     L+E E V +EM+      +  +Y + +D + K G   +A  
Sbjct: 494 KPDLLLYGTIIWGLCSQNKLEECEFVMSEMKACGIRANSVIYTIRMDAYFKTGKTVEALN 553

Query: 592 WYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPS 639
             + M   G+   + T   L+    + G + +A      M +  L+P+
Sbjct: 554 LLQEMCDLGVEVTIVTFCVLIDGLCKKGLVEEAIDYFARMADFNLQPN 601



 Score = 96.3 bits (238), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 64/241 (26%), Positives = 119/241 (49%), Gaps = 1/241 (0%)

Query: 359 DEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVF 418
           D   Y T++  L    +      ++ +M   G + N V Y   + +Y +     EAL++ 
Sbjct: 496 DLLLYGTIIWGLCSQNKLEECEFVMSEMKACGIRANSVIYTIRMDAYFKTGKTVEALNLL 555

Query: 419 KQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTY-SVIINCLGK 477
           ++M  +G E   VT+C LID   K G ++ A+D + +M    L P+     + +I+ L K
Sbjct: 556 QEMCDLGVEVTIVTFCVLIDGLCKKGLVEEAIDYFARMADFNLQPNNVAVCTALIDGLCK 615

Query: 478 AGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVT 537
             +++AA +LF EM ++  +P+ + Y  +I    K +++Q AL +   M   G E D   
Sbjct: 616 NNYIEAAKKLFDEMQDKNMVPDKIAYTALIDGNLKHKDFQEALNIRSRMSELGMELDLHA 675

Query: 538 YSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAML 597
           Y+ ++  L     + +A     EM  K  VPDE +   L+  + + G++ +A E ++ +L
Sbjct: 676 YTSLVWGLSQGNLVQQARMFLNEMIGKGIVPDEILCIRLLRKYYELGSIDEAIELHDELL 735

Query: 598 Q 598
           +
Sbjct: 736 K 736



 Score = 88.6 bits (218), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 92/372 (24%), Positives = 154/372 (41%), Gaps = 49/372 (13%)

Query: 325 MDAYQANQVLKQLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLD 384
           +DA     +L+Q      A+ F   +RR  G   +E TYT+++    +A       KL D
Sbjct: 364 IDALCKEHMLQQ------AIKFLLDMRR-VGLSPNEFTYTSLIDANCKAGYLSDALKLAD 416

Query: 385 QMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAG 444
           +M++     NVVTY  L+    +   + EA D+F+ M   G  P+  TY  L+  H K  
Sbjct: 417 EMLQVQVGFNVVTYTTLLDGLCKEGRMMEAEDLFRAMIKAGVTPNLKTYTALVHGHIKNK 476

Query: 445 FLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYN 504
            ++ A+++ K+++   + PD   Y  II  L     L+    +  EM   G   N V Y 
Sbjct: 477 RVENALELLKEIKEKKIKPDLLLYGTIIWGLCSQNKLEECEFVMSEMKACGIRANSVIYT 536

Query: 505 IMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVL------------------- 545
           I +    K      AL L ++M + G E   VT+ ++++ L                   
Sbjct: 537 IRMDAYFKTGKTVEALNLLQEMCDLGVEVTIVTFCVLIDGLCKKGLVEEAIDYFARMADF 596

Query: 546 ---------------GHC--GYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRK 588
                          G C   Y++ A+ +F EM+ KN VPD+  Y  L+D   K  + ++
Sbjct: 597 NLQPNNVAVCTALIDGLCKNNYIEAAKKLFDEMQDKNMVPDKIAYTALIDGNLKHKDFQE 656

Query: 589 AWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
           A      M + G+  ++    SL+    +   +  A   L  M+  G+ P        + 
Sbjct: 657 ALNIRSRMSELGMELDLHAYTSLVWGLSQGNLVQQARMFLNEMIGKGIVPD------EIL 710

Query: 649 CCTEARSPYDMG 660
           C    R  Y++G
Sbjct: 711 CIRLLRKYYELG 722


>gi|255660834|gb|ACU25586.1| pentatricopeptide repeat-containing protein [Dipyrena glaberrima]
          Length = 418

 Score =  147 bits (371), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 85/299 (28%), Positives = 159/299 (53%)

Query: 350 LRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRAN 409
           L R+  F+    T   ++  L + + F  +     +++  G   ++  +N L+H + +  
Sbjct: 91  LTREHKFRVPFDTCRKVLEHLMKLKYFKLVWGFYKEILECGYPASLYFFNILMHRFCKEG 150

Query: 410 YLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYS 469
            +  +  VF  ++  G  P  V++ TL++ + + G LD    +   M A+G+ PD +TYS
Sbjct: 151 EIRLSQSVFDAIRKWGLRPSVVSFNTLMNGYIRQGDLDKGFRLKSAMHASGVQPDVYTYS 210

Query: 470 VIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNA 529
           V+IN L K   +  A++LF EM+++G +PN VT+  +I    K      A+++Y+ M + 
Sbjct: 211 VLINGLCKESKMDEANELFXEMLDKGLVPNGVTFTTLIDGHCKNGKVDLAMEIYKQMLSQ 270

Query: 530 GFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKA 589
              PD +TY+ ++  L   G L +A  +  EM  K   PD+  Y  L+D   K G++  A
Sbjct: 271 SLSPDLITYNTLIYGLCKKGDLKQARNLINEMSMKGLKPDKITYTTLIDGSCKDGDLETA 330

Query: 590 WEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
           +E+ + M++  +R +     +L+S   + G+  DA  +L+ ML++GLKP   TYT++++
Sbjct: 331 FEYRKRMIEENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPDSGTYTMIIN 389



 Score =  123 bits (308), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 82/259 (31%), Positives = 135/259 (52%), Gaps = 6/259 (2%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINK---LLDQMVRDGCQPNVVTYNRLIHSYGRA 408
           R+ G +    ++ T++   G  RQ G ++K   L   M   G QP+V TY+ LI+   + 
Sbjct: 163 RKWGLRPSVVSFNTLMN--GYIRQ-GDLDKGFRLKSAMHASGVQPDVYTYSVLINGLCKE 219

Query: 409 NYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTY 468
           + ++EA ++F +M   G  P+ VT+ TLID H K G +D+AM++YK+M +  LSPD  TY
Sbjct: 220 SKMDEANELFXEMLDKGLVPNGVTFTTLIDGHCKNGKVDLAMEIYKQMLSQSLSPDLITY 279

Query: 469 SVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQN 528
           + +I  L K G L+ A  L  EM  +G  P+ +TY  +I    K  + ++A +  + M  
Sbjct: 280 NTLIYGLCKKGDLKQARNLINEMSMKGLKPDKITYTTLIDGSCKDGDLETAFEYRKRMIE 339

Query: 529 AGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRK 588
                D V Y+ ++  L   G   +AE +  EM      PD   Y ++++ + K G+V  
Sbjct: 340 ENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPDSGTYTMIINEFCKKGDVWT 399

Query: 589 AWEWYEAMLQAGLRPNVPT 607
             +  + M + G  P+V T
Sbjct: 400 GSKLLKEMQRDGHVPSVVT 418



 Score =  105 bits (262), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 76/313 (24%), Positives = 144/313 (46%), Gaps = 24/313 (7%)

Query: 356 FKHDEHTYTTMVGILGRARQFGAINKLLDQMV-RDGC-----------------QPNVVT 397
           F+H  H+Y TM+  L   +       L+  +V R G                  + ++  
Sbjct: 9   FRHTLHSYCTMIHFLCTHQMLLEAKTLIQIVVSRKGKDSASAVFAAILETKGTQRSDIYV 68

Query: 398 YNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCT---LIDIHAKAGFLDVAMDMYK 454
           ++ LI +Y  + +L +A++ ++  +       RV + T   +++   K  +  +    YK
Sbjct: 69  FSGLITAYLESGFLRDAIECYRLTRE---HKFRVPFDTCRKVLEHLMKLKYFKLVWGFYK 125

Query: 455 KMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKAR 514
           ++   G     + ++++++   K G ++ +  +F  +   G  P++V++N ++    +  
Sbjct: 126 EILECGYPASLYFFNILMHRFCKEGEIRLSQSVFDAIRKWGLRPSVVSFNTLMNGYIRQG 185

Query: 515 NYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYG 574
           +     +L   M  +G +PD  TYS+++  L     +DEA  +F EM  K  VP+   + 
Sbjct: 186 DLDKGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMDEANELFXEMLDKGLVPNGVTFT 245

Query: 575 LLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNL 634
            L+D   K G V  A E Y+ ML   L P++ T N+L+    + G L  A +L+  M   
Sbjct: 246 TLIDGHCKNGKVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQARNLINEMSMK 305

Query: 635 GLKPSLQTYTLLL 647
           GLKP   TYT L+
Sbjct: 306 GLKPDKITYTTLI 318



 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 35/157 (22%), Positives = 77/157 (49%), Gaps = 1/157 (0%)

Query: 499 NLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVF 558
           ++  ++ +I    ++   + A++ YR  +   F     T   V+E L    Y       +
Sbjct: 65  DIYVFSGLITAYLESGFLRDAIECYRLTREHKFRVPFDTCRKVLEHLMKLKYFKLVWGFY 124

Query: 559 AEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRV 618
            E+    +      + +L+  + K G +R +   ++A+ + GLRP+V + N+L++ ++R 
Sbjct: 125 KEILECGYPASLYFFNILMHRFCKEGEIRLSQSVFDAIRKWGLRPSVVSFNTLMNGYIRQ 184

Query: 619 GQLSDAYHLLQGMLNLGLKPSLQTYTLLLS-CCTEAR 654
           G L   + L   M   G++P + TY++L++  C E++
Sbjct: 185 GDLDKGFRLKSAMHASGVQPDVYTYSVLINGLCKESK 221


>gi|225454948|ref|XP_002277434.1| PREDICTED: pentatricopeptide repeat-containing protein At5g14770,
           mitochondrial-like [Vitis vinifera]
          Length = 835

 Score =  147 bits (371), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 84/301 (27%), Positives = 153/301 (50%)

Query: 347 FNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYG 406
           F+   RQ G   D  T+ TM+    +    G   KLL++M   G +PN +T N L+    
Sbjct: 423 FHTGMRQLGLAPDSATFNTMINAYCKEGNLGNALKLLNEMKSYGLKPNSITCNILVQRLC 482

Query: 407 RANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTF 466
            A  + + +D+   M V+G  P   T+  ++D  +K+   DV + M+ ++   G+  D  
Sbjct: 483 AAGEIEKTMDLLNDMLVMGFHPTPTTHKAVLDASSKSRRADVILHMHDQLVGMGVKLDLS 542

Query: 467 TYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDM 526
           TY+ +I+   + G ++ A  +F +M+ +G + +++TYN +I     + + + A  ++  M
Sbjct: 543 TYNTLISTFCRLGMIRRATLVFKDMMGKGILADIITYNALIHGYCISSHLKKAFAVHSQM 602

Query: 527 QNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNV 586
              G  P+  TY+I++  L     + EA  +  +M+ +  VP+   Y +LV   GK GN+
Sbjct: 603 LTEGVSPNVETYNILLGGLSAARLIKEAAGLVNQMKERGLVPNATTYDILVSGHGKIGNM 662

Query: 587 RKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLL 646
           ++  + Y  M+  G  P   T N L+S F +  ++S A  L+Q M   G+ P+  TY +L
Sbjct: 663 KECVKLYCEMITKGFVPKTRTYNVLISCFAKGKKMSQAKELMQEMQVRGIPPNSSTYDIL 722

Query: 647 L 647
           +
Sbjct: 723 I 723



 Score =  144 bits (362), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 85/285 (29%), Positives = 150/285 (52%), Gaps = 8/285 (2%)

Query: 375 QFGAINK---LLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRV 431
           + G +NK   LL +M      PNV+ Y+ ++  Y +   LNEA+DV ++M      P+  
Sbjct: 239 KLGDVNKGELLLQEMEEKHIFPNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVF 298

Query: 432 TYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEM 491
            Y TLID + KA    +A+D++K+M++ GL  + F     +N L ++G ++ A +LF +M
Sbjct: 299 VYGTLIDGYFKADQRGIALDLFKEMKSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDM 358

Query: 492 VNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDM--QNAGFEPDKVTYSIVMEVLGHCG 549
           +++G +P+ V Y  M+    KA     A  + ++M  +++GF  D V Y++++  L   G
Sbjct: 359 MSRGLLPDRVNYTSMMDGFFKAGKESDAFNIAQEMTEKSSGF--DVVAYNVLINGLFKLG 416

Query: 550 YLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCN 609
              E+E+    MR+    PD   +  +++ + K GN+  A +    M   GL+PN  TCN
Sbjct: 417 KY-ESESFHTGMRQLGLAPDSATFNTMINAYCKEGNLGNALKLLNEMKSYGLKPNSITCN 475

Query: 610 SLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEAR 654
            L+      G++     LL  ML +G  P+  T+  +L   +++R
Sbjct: 476 ILVQRLCAAGEIEKTMDLLNDMLVMGFHPTPTTHKAVLDASSKSR 520



 Score =  142 bits (358), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 102/374 (27%), Positives = 172/374 (45%), Gaps = 41/374 (10%)

Query: 381 KLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIH 440
           +LL+ M  +G  P++VTYN L++ + +   L  A  +  ++ +V  EP+ +TY TLID +
Sbjct: 38  ELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFTAKKLMGEISLVNLEPNVITYTTLIDAY 97

Query: 441 AKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNL 500
            K+  L+ A+ MY +M    L PD  TY+ I+N L K+G ++ A  +F EM   G +PN 
Sbjct: 98  CKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGLCKSGKVEEAKSVFREMEEVGVVPNR 157

Query: 501 VTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAE 560
            +Y  +I    K  N   A  L   M   G   D V Y+ +M+ L   G  + AE +F  
Sbjct: 158 FSYATLIDSLFKEGNVAEAFVLQGRMVVRGIGFDVVVYTALMDGLFKAGMANNAEDMFQV 217

Query: 561 MRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQ 620
           +  ++ VP+   Y  L+D   K G+V K     + M +  + PNV   +S++  + + G 
Sbjct: 218 LLEESLVPNCVTYSALIDGHCKLGDVNKGELLLQEMEEKHIFPNVIVYSSIVDGYTKKGL 277

Query: 621 LSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGFCHELMAVSGHPAHMFLLSM 680
           L++A  +++ M+   + P++  Y  L+                                 
Sbjct: 278 LNEAMDVMRKMVQRNILPNVFVYGTLI--------------------------------- 304

Query: 681 PSPGPDGQNVRDHVGSFLEM---MHSEDRESKRGLVDAVVDFLHKSGLKEEAGSVWEVAA 737
                DG    D  G  L++   M S   E    ++D+ V+ L +SG  EEA  +++   
Sbjct: 305 -----DGYFKADQRGIALDLFKEMKSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDMM 359

Query: 738 QKNVYPDAVKEKGM 751
            + + PD V    M
Sbjct: 360 SRGLLPDRVNYTSM 373



 Score =  133 bits (335), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 81/286 (28%), Positives = 146/286 (51%)

Query: 362 TYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQM 421
           TYTT++    +++       + D+M      P+VVTY  +++   ++  + EA  VF++M
Sbjct: 89  TYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGLCKSGKVEEAKSVFREM 148

Query: 422 QVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHL 481
           + VG  P+R +Y TLID   K G +  A  +  +M   G+  D   Y+ +++ L KAG  
Sbjct: 149 EEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIGFDVVVYTALMDGLFKAGMA 208

Query: 482 QAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIV 541
             A  +F  ++ +  +PN VTY+ +I    K  +      L ++M+     P+ + YS +
Sbjct: 209 NNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLLQEMEEKHIFPNVIVYSSI 268

Query: 542 MEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGL 601
           ++     G L+EA  V  +M ++N +P+  VYG L+D + KA     A + ++ M   GL
Sbjct: 269 VDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFKADQRGIALDLFKEMKSRGL 328

Query: 602 RPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
             N    +S ++   R G++ +A  L + M++ GL P    YT ++
Sbjct: 329 EENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDRVNYTSMM 374



 Score =  125 bits (315), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 79/281 (28%), Positives = 147/281 (52%), Gaps = 4/281 (1%)

Query: 359 DEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVF 418
           D  TY T++    +        KL+ ++     +PNV+TY  LI +Y ++  L +AL ++
Sbjct: 51  DIVTYNTLMNGFCKIGDLFTAKKLMGEISLVNLEPNVITYTTLIDAYCKSQCLEDALYMY 110

Query: 419 KQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKA 478
            +M V    PD VTY  +++   K+G ++ A  ++++M+  G+ P+ F+Y+ +I+ L K 
Sbjct: 111 DEMTVKSLVPDVVTYTCIMNGLCKSGKVEEAKSVFREMEEVGVVPNRFSYATLIDSLFKE 170

Query: 479 GHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTY 538
           G++  A  L   MV +G   ++V Y  ++    KA    +A  +++ +      P+ VTY
Sbjct: 171 GNVAEAFVLQGRMVVRGIGFDVVVYTALMDGLFKAGMANNAEDMFQVLLEESLVPNCVTY 230

Query: 539 SIVMEVLGHC--GYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAM 596
           S +++  GHC  G +++ E +  EM  K+  P+  VY  +VD + K G + +A +    M
Sbjct: 231 SALID--GHCKLGDVNKGELLLQEMEEKHIFPNVIVYSSIVDGYTKKGLLNEAMDVMRKM 288

Query: 597 LQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLK 637
           +Q  + PNV    +L+  + +  Q   A  L + M + GL+
Sbjct: 289 VQRNILPNVFVYGTLIDGYFKADQRGIALDLFKEMKSRGLE 329



 Score =  120 bits (302), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 88/357 (24%), Positives = 155/357 (43%), Gaps = 35/357 (9%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
            + G   +  +Y T++  L +         L  +MV  G   +VV Y  L+    +A   
Sbjct: 149 EEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIGFDVVVYTALMDGLFKAGMA 208

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
           N A D+F+ +      P+ VTY  LID H K G ++    + ++M+   + P+   YS I
Sbjct: 209 NNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLLQEMEEKHIFPNVIVYSSI 268

Query: 472 INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF 531
           ++   K G L  A  +  +MV +  +PN+  Y  +I    KA     AL L+++M++ G 
Sbjct: 269 VDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFKADQRGIALDLFKEMKSRGL 328

Query: 532 EPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAW- 590
           E +       +  L   G ++EA+ +F +M  +  +PD   Y  ++D + KAG    A+ 
Sbjct: 329 EENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDRVNYTSMMDGFFKAGKESDAFN 388

Query: 591 ---------------------------------EWYEAMLQAGLRPNVPTCNSLLSAFLR 617
                                             ++  M Q GL P+  T N++++A+ +
Sbjct: 389 IAQEMTEKSSGFDVVAYNVLINGLFKLGKYESESFHTGMRQLGLAPDSATFNTMINAYCK 448

Query: 618 VGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS-CCTEARSPYDMGFCHELMAVSGHPA 673
            G L +A  LL  M + GLKP+  T  +L+   C        M   ++++ +  HP 
Sbjct: 449 EGNLGNALKLLNEMKSYGLKPNSITCNILVQRLCAAGEIEKTMDLLNDMLVMGFHPT 505



 Score =  111 bits (278), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 79/296 (26%), Positives = 141/296 (47%), Gaps = 5/296 (1%)

Query: 355 GFKHDEHTYTTMV-GILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHS-YGRANYLN 412
           G   D   YT+M+ G     ++  A N +  +M       +VV YN LI+  +    Y +
Sbjct: 362 GLLPDRVNYTSMMDGFFKAGKESDAFN-IAQEMTEKSSGFDVVAYNVLINGLFKLGKYES 420

Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
           E+      M+ +G  PD  T+ T+I+ + K G L  A+ +  +M++ GL P++ T ++++
Sbjct: 421 ESFHT--GMRQLGLAPDSATFNTMINAYCKEGNLGNALKLLNEMKSYGLKPNSITCNILV 478

Query: 473 NCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFE 532
             L  AG ++    L  +M+  G  P   T+  ++   +K+R     L ++  +   G +
Sbjct: 479 QRLCAAGEIEKTMDLLNDMLVMGFHPTPTTHKAVLDASSKSRRADVILHMHDQLVGMGVK 538

Query: 533 PDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEW 592
            D  TY+ ++      G +  A  VF +M  K  + D   Y  L+  +  + +++KA+  
Sbjct: 539 LDLSTYNTLISTFCRLGMIRRATLVFKDMMGKGILADIITYNALIHGYCISSHLKKAFAV 598

Query: 593 YEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
           +  ML  G+ PNV T N LL        + +A  L+  M   GL P+  TY +L+S
Sbjct: 599 HSQMLTEGVSPNVETYNILLGGLSAARLIKEAAGLVNQMKERGLVPNATTYDILVS 654



 Score =  110 bits (274), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 71/285 (24%), Positives = 133/285 (46%), Gaps = 4/285 (1%)

Query: 390 GCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVA 449
           G  P+  T+N +I++Y +   L  AL +  +M+  G +P+ +T   L+     AG ++  
Sbjct: 431 GLAPDSATFNTMINAYCKEGNLGNALKLLNEMKSYGLKPNSITCNILVQRLCAAGEIEKT 490

Query: 450 MDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIAL 509
           MD+   M   G  P   T+  +++   K+        +  ++V  G   +L TYN +I+ 
Sbjct: 491 MDLLNDMLVMGFHPTPTTHKAVLDASSKSRRADVILHMHDQLVGMGVKLDLSTYNTLIST 550

Query: 510 QAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHC--GYLDEAEAVFAEMRRKNWV 567
             +    + A  +++DM   G   D +TY+ ++   G+C   +L +A AV ++M  +   
Sbjct: 551 FCRLGMIRRATLVFKDMMGKGILADIITYNALIH--GYCISSHLKKAFAVHSQMLTEGVS 608

Query: 568 PDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHL 627
           P+   Y +L+     A  +++A      M + GL PN  T + L+S   ++G + +   L
Sbjct: 609 PNVETYNILLGGLSAARLIKEAAGLVNQMKERGLVPNATTYDILVSGHGKIGNMKECVKL 668

Query: 628 LQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGFCHELMAVSGHP 672
              M+  G  P  +TY +L+SC  + +         + M V G P
Sbjct: 669 YCEMITKGFVPKTRTYNVLISCFAKGKKMSQAKELMQEMQVRGIP 713



 Score =  109 bits (272), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 77/313 (24%), Positives = 146/313 (46%), Gaps = 2/313 (0%)

Query: 342 VALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRL 401
           +AL  F  ++ + G + +     + V  L R+ +    ++L   M+  G  P+ V Y  +
Sbjct: 315 IALDLFKEMKSR-GLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDRVNYTSM 373

Query: 402 IHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGL 461
           +  + +A   ++A ++ ++M       D V Y  LI+   K G  + +   +  M+  GL
Sbjct: 374 MDGFFKAGKESDAFNIAQEMTEKSSGFDVVAYNVLINGLFKLGKYE-SESFHTGMRQLGL 432

Query: 462 SPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALK 521
           +PD+ T++ +IN   K G+L  A +L  EM + G  PN +T NI++     A   +  + 
Sbjct: 433 APDSATFNTMINAYCKEGNLGNALKLLNEMKSYGLKPNSITCNILVQRLCAAGEIEKTMD 492

Query: 522 LYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWG 581
           L  DM   GF P   T+  V++        D    +  ++       D   Y  L+  + 
Sbjct: 493 LLNDMLVMGFHPTPTTHKAVLDASSKSRRADVILHMHDQLVGMGVKLDLSTYNTLISTFC 552

Query: 582 KAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQ 641
           + G +R+A   ++ M+  G+  ++ T N+L+  +     L  A+ +   ML  G+ P+++
Sbjct: 553 RLGMIRRATLVFKDMMGKGILADIITYNALIHGYCISSHLKKAFAVHSQMLTEGVSPNVE 612

Query: 642 TYTLLLSCCTEAR 654
           TY +LL   + AR
Sbjct: 613 TYNILLGGLSAAR 625


>gi|225427506|ref|XP_002263778.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g31840-like [Vitis vinifera]
          Length = 1131

 Score =  147 bits (371), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 112/428 (26%), Positives = 192/428 (44%), Gaps = 37/428 (8%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           G K D   +++++    R    G   ++  +M+++G  PNVVTY+ LI+   R   + EA
Sbjct: 340 GVKMDVVIFSSIMDAYVRVGDLGKAIEVYTRMLKEGISPNVVTYSILINGLCRNGRVLEA 399

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
             VF Q+   G EP  +TY +LID   K+  L     +Y  M   G  PD    S++IN 
Sbjct: 400 CGVFGQILKQGLEPSVLTYSSLIDGFCKSENLRDGFGLYGIMLRKGHVPDVVVCSMLING 459

Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPD 534
           L + G +  A + F + V +G   N   +N +I    + +  +  LK+Y  M      PD
Sbjct: 460 LSRQGMMDEALRFFFQAVKRGLTLNNYLFNALIDGCFRLKRTRDGLKMYILMGMYKVIPD 519

Query: 535 KVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYE 594
            VTY+++++ L   G LDEA A+F ++ +K + PD  +Y  L+D + K  +     + ++
Sbjct: 520 VVTYTVLVKGLAEQGRLDEALALFFQLLKKGFSPDHIIYCTLIDGFCKKRDPATGLQIFK 579

Query: 595 AMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTY-TLLLSCCTEA 653
            M   G+ P++   N L++ F R G + +   LL+ ++  GL+P + TY T++   C+  
Sbjct: 580 LMQSNGIFPDICIYNVLINMFFREGCVENVLELLREIIKYGLEPDIVTYNTMICGYCSLK 639

Query: 654 RSPYDMGFCHELMAVSGHP--------------------AHMFLLSMPSPGPDGQNVRDH 693
                +     L      P                    A +   SM   GP+  N+  +
Sbjct: 640 IFSKAIKLFEVLKCGRTQPNAITFTILIDAYCKDGRMDDAMLIFSSMLERGPE-PNILTY 698

Query: 694 VGSFLEMMHSEDRESKRGLVD---------------AVVDFLHKSGLKEEAGSVWEVAAQ 738
                    +E+ ES   L +                ++D L K GL EEA   ++ A  
Sbjct: 699 SCLIDGYFKTENTESAFELYEKMLGDRVSPNIVSYSILIDGLCKKGLMEEASLAFQCAIG 758

Query: 739 KNVYPDAV 746
           +++ PD +
Sbjct: 759 RHLLPDVI 766



 Score =  141 bits (355), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 76/255 (29%), Positives = 132/255 (51%)

Query: 393 PNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDM 452
           P+VVTY  L+        L+EAL +F Q+   G  PD + YCTLID   K       + +
Sbjct: 518 PDVVTYTVLVKGLAEQGRLDEALALFFQLLKKGFSPDHIIYCTLIDGFCKKRDPATGLQI 577

Query: 453 YKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAK 512
           +K MQ+ G+ PD   Y+V+IN   + G ++   +L  E++  G  P++VTYN MI     
Sbjct: 578 FKLMQSNGIFPDICIYNVLINMFFREGCVENVLELLREIIKYGLEPDIVTYNTMICGYCS 637

Query: 513 ARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPV 572
            + +  A+KL+  ++    +P+ +T++I+++     G +D+A  +F+ M  +   P+   
Sbjct: 638 LKIFSKAIKLFEVLKCGRTQPNAITFTILIDAYCKDGRMDDAMLIFSSMLERGPEPNILT 697

Query: 573 YGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGML 632
           Y  L+D + K  N   A+E YE ML   + PN+ + + L+    + G + +A    Q  +
Sbjct: 698 YSCLIDGYFKTENTESAFELYEKMLGDRVSPNIVSYSILIDGLCKKGLMEEASLAFQCAI 757

Query: 633 NLGLKPSLQTYTLLL 647
              L P +  Y +L+
Sbjct: 758 GRHLLPDVIAYGILI 772



 Score =  135 bits (340), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 127/530 (23%), Positives = 216/530 (40%), Gaps = 63/530 (11%)

Query: 333 VLKQLQDH-TVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRD-- 389
           V+ QL+ + T AL FF W     G  H   ++  +  +L R R F    ++ D+MV    
Sbjct: 61  VVFQLRSNPTSALRFFEWAENFLGLCHPVQSFCGIAHVLLRHRMFDPATRVFDRMVGQFG 120

Query: 390 ---------------GCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYC 434
                          G  P+ V Y+ L+H Y R   ++ A+D F  M  +G         
Sbjct: 121 NLEVLGEFHGSFRNYGSNPSTV-YSFLLHCYCRNGMVDRAVDTFAWMSKMGVSISHYAAS 179

Query: 435 TLIDIHAKAGFLDVAMDMYKKMQAA------------------------------GLSPD 464
            ++D+   +  +DV ++ Y++M                                 GL P 
Sbjct: 180 EMLDLLIDSDRIDVILENYEEMCKGLGVYEFVFNSFLKRGEVEKGLNFHRALVERGLVPK 239

Query: 465 TFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYR 524
               + I+  L     +  A   F  MV  G  PNLVT++ +I +  K      A  LY 
Sbjct: 240 IVDCNKILKGLCMGNQIGVASDFFDMMVRSGPSPNLVTFSTLINVYCKELRLDEAFSLYN 299

Query: 525 DMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAG 584
            M   G  PD V YSI++  L   G L+E  ++F+    +    D  ++  ++D + + G
Sbjct: 300 LMIEKGIVPDLVIYSILINGLFRAGKLEEGNSLFSMALARGVKMDVVIFSSIMDAYVRVG 359

Query: 585 NVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYT 644
           ++ KA E Y  ML+ G+ PNV T + L++   R G++ +A  +   +L  GL+PS+ TY+
Sbjct: 360 DLGKAIEVYTRMLKEGISPNVVTYSILINGLCRNGRVLEACGVFGQILKQGLEPSVLTYS 419

Query: 645 LLLSCCTEARSPYDMGFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSE 704
            L+    ++ +  D    + +M   GH   + + SM   G   Q + D    F       
Sbjct: 420 SLIDGFCKSENLRDGFGLYGIMLRKGHVPDVVVCSMLINGLSRQGMMDEALRFFFQAVKR 479

Query: 705 DRESKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAVKEKGMSYWLINLHVMSDG 764
                  L +A++D   +     +   ++ +     V PD V     +Y ++   +   G
Sbjct: 480 GLTLNNYLFNALIDGCFRLKRTRDGLKMYILMGMYKVIPDVV-----TYTVLVKGLAEQG 534

Query: 765 TAVIALSRTLAWFRKQMLISGVGPSRI---DIVTGW-GRRSRVTGTSLVR 810
                L   LA F  Q+L  G  P  I    ++ G+  +R   TG  + +
Sbjct: 535 R----LDEALALFF-QLLKKGFSPDHIIYCTLIDGFCKKRDPATGLQIFK 579



 Score =  130 bits (327), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 75/266 (28%), Positives = 136/266 (51%), Gaps = 3/266 (1%)

Query: 339 DHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTY 398
           D  +AL FF  L++  GF  D   Y T++    + R      ++   M  +G  P++  Y
Sbjct: 537 DEALAL-FFQLLKK--GFSPDHIIYCTLIDGFCKKRDPATGLQIFKLMQSNGIFPDICIY 593

Query: 399 NRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQA 458
           N LI+ + R   +   L++ +++   G EPD VTY T+I  +        A+ +++ ++ 
Sbjct: 594 NVLINMFFREGCVENVLELLREIIKYGLEPDIVTYNTMICGYCSLKIFSKAIKLFEVLKC 653

Query: 459 AGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQS 518
               P+  T++++I+   K G +  A  +F  M+ +G  PN++TY+ +I    K  N +S
Sbjct: 654 GRTQPNAITFTILIDAYCKDGRMDDAMLIFSSMLERGPEPNILTYSCLIDGYFKTENTES 713

Query: 519 ALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVD 578
           A +LY  M      P+ V+YSI+++ L   G ++EA   F     ++ +PD   YG+L+ 
Sbjct: 714 AFELYEKMLGDRVSPNIVSYSILIDGLCKKGLMEEASLAFQCAIGRHLLPDVIAYGILIR 773

Query: 579 LWGKAGNVRKAWEWYEAMLQAGLRPN 604
            + K G + +A   Y+ ML  G+ P+
Sbjct: 774 GYCKVGRLAEAMMLYDHMLVNGIMPD 799



 Score =  130 bits (326), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 88/330 (26%), Positives = 157/330 (47%), Gaps = 4/330 (1%)

Query: 330 ANQVLKQL---QDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQM 386
            N++LK L       VA  FF+ + R +G   +  T++T++ +  +  +      L + M
Sbjct: 243 CNKILKGLCMGNQIGVASDFFDMMVR-SGPSPNLVTFSTLINVYCKELRLDEAFSLYNLM 301

Query: 387 VRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFL 446
           +  G  P++V Y+ LI+   RA  L E   +F      G + D V + +++D + + G L
Sbjct: 302 IEKGIVPDLVIYSILINGLFRAGKLEEGNSLFSMALARGVKMDVVIFSSIMDAYVRVGDL 361

Query: 447 DVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIM 506
             A+++Y +M   G+SP+  TYS++IN L + G +  A  +F +++ QG  P+++TY+ +
Sbjct: 362 GKAIEVYTRMLKEGISPNVVTYSILINGLCRNGRVLEACGVFGQILKQGLEPSVLTYSSL 421

Query: 507 IALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNW 566
           I    K+ N +    LY  M   G  PD V  S+++  L   G +DEA   F +  ++  
Sbjct: 422 IDGFCKSENLRDGFGLYGIMLRKGHVPDVVVCSMLINGLSRQGMMDEALRFFFQAVKRGL 481

Query: 567 VPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYH 626
             +  ++  L+D   +    R   + Y  M    + P+V T   L+      G+L +A  
Sbjct: 482 TLNNYLFNALIDGCFRLKRTRDGLKMYILMGMYKVIPDVVTYTVLVKGLAEQGRLDEALA 541

Query: 627 LLQGMLNLGLKPSLQTYTLLLSCCTEARSP 656
           L   +L  G  P    Y  L+    + R P
Sbjct: 542 LFFQLLKKGFSPDHIIYCTLIDGFCKKRDP 571



 Score = 98.2 bits (243), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 61/235 (25%), Positives = 117/235 (49%), Gaps = 5/235 (2%)

Query: 338 QDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVT 397
           +D    L  F  ++    F  D   Y  ++ +  R      + +LL ++++ G +P++VT
Sbjct: 569 RDPATGLQIFKLMQSNGIFP-DICIYNVLINMFFREGCVENVLELLREIIKYGLEPDIVT 627

Query: 398 YNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQ 457
           YN +I  Y      ++A+ +F+ ++    +P+ +T+  LID + K G +D AM ++  M 
Sbjct: 628 YNTMICGYCSLKIFSKAIKLFEVLKCGRTQPNAITFTILIDAYCKDGRMDDAMLIFSSML 687

Query: 458 AAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQ 517
             G  P+  TYS +I+   K  + ++A +L+ +M+     PN+V+Y+I+I    K    +
Sbjct: 688 ERGPEPNILTYSCLIDGYFKTENTESAFELYEKMLGDRVSPNIVSYSILIDGLCKKGLME 747

Query: 518 SALKLYRDMQNAGFEPDKVTYSIVMEVLGHC--GYLDEAEAVFAEMRRKNWVPDE 570
            A   ++        PD + Y I++   G+C  G L EA  ++  M     +PD+
Sbjct: 748 EASLAFQCAIGRHLLPDVIAYGILIR--GYCKVGRLAEAMMLYDHMLVNGIMPDD 800



 Score = 93.2 bits (230), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 59/220 (26%), Positives = 108/220 (49%), Gaps = 9/220 (4%)

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
           + G + D  TY TM+      + F    KL + +     QPN +T+  LI +Y +   ++
Sbjct: 618 KYGLEPDIVTYNTMICGYCSLKIFSKAIKLFEVLKCGRTQPNAITFTILIDAYCKDGRMD 677

Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
           +A+ +F  M   G EP+ +TY  LID + K    + A ++Y+KM    +SP+  +YS++I
Sbjct: 678 DAMLIFSSMLERGPEPNILTYSCLIDGYFKTENTESAFELYEKMLGDRVSPNIVSYSILI 737

Query: 473 NCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFE 532
           + L K G ++ A   F   + +  +P+++ Y I+I    K      A+ LY  M   G  
Sbjct: 738 DGLCKKGLMEEASLAFQCAIGRHLLPDVIAYGILIRGYCKVGRLAEAMMLYDHMLVNGIM 797

Query: 533 PDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPV 572
           PD     ++ + L   G+ D   ++++ +      P+ P+
Sbjct: 798 PD----DLLQKALAEYGFQDSQASIYSTV-----FPESPL 828


>gi|224126843|ref|XP_002319940.1| predicted protein [Populus trichocarpa]
 gi|222858316|gb|EEE95863.1| predicted protein [Populus trichocarpa]
          Length = 555

 Score =  147 bits (371), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 89/274 (32%), Positives = 150/274 (54%), Gaps = 8/274 (2%)

Query: 362 TYTTMV-GI--LGRARQ-FGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDV 417
           TYT+++ G+  LGR ++ FG    LL++M      P++V ++ LI    +   ++EA  +
Sbjct: 268 TYTSLIHGLRNLGRWKEAFG----LLNEMKGGNIMPDLVAFSVLIDIMCKEGEVSEARVI 323

Query: 418 FKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGK 477
            K M  +G EPD  TY TL++ +     +  A  +++ M + G  PD F++S+++N   K
Sbjct: 324 LKTMTEMGVEPDVATYNTLMNGYCLRMEVVEARKVFEVMISKGRMPDVFSFSILVNGYCK 383

Query: 478 AGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVT 537
           A  +  A QLF EM ++G IP+ V+YN +I+   +AR    A +L++DM + G+ P+ VT
Sbjct: 384 AKRIDEAKQLFDEMTHRGLIPDTVSYNTLISGLCQARRPLEAEELFKDMHSNGYPPNLVT 443

Query: 538 YSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAML 597
           YSI+++ L   GYLD+A  +F  M      PD   Y +++D   K G  + A E +  + 
Sbjct: 444 YSILLDCLSKQGYLDQAMGLFRAMENSGLKPDLVTYNIMIDGMCKYGKFKDARELFAELS 503

Query: 598 QAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGM 631
             GL+PN   C   +    + G L +A+   + M
Sbjct: 504 VKGLQPNNWVCTPTIDGVCKGGLLDEAHKAFRQM 537



 Score =  143 bits (361), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 93/337 (27%), Positives = 160/337 (47%), Gaps = 39/337 (11%)

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLI---------- 402
            AG  HD  + T ++    R         +L ++++ G +PNV+T++ LI          
Sbjct: 119 MAGISHDVLSLTILINCFCRLCHVDYGFSVLGKIIKLGLEPNVITFSTLINGFCIEGKIG 178

Query: 403 ------------------HSYG-------RANYLNEALDVFKQMQVVGCEPDRVTYCTLI 437
                             HSY        R     E + + + M+VVGCEPD V Y T++
Sbjct: 179 RAIELFDVMVARGYKPNVHSYSIIIKGLCRVGKTTEVIKLLEHMKVVGCEPDVVIYNTIV 238

Query: 438 DIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCI 497
           D   K   ++ A+ ++ KM+  G+ P   TY+ +I+ L   G  + A  L  EM     +
Sbjct: 239 DRLCKDRLVNEAVHIFCKMKGTGILPTVVTYTSLIHGLRNLGRWKEAFGLLNEMKGGNIM 298

Query: 498 PNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLD--EAE 555
           P+LV ++++I +  K      A  + + M   G EPD  TY+ +M   G+C  ++  EA 
Sbjct: 299 PDLVAFSVLIDIMCKEGEVSEARVILKTMTEMGVEPDVATYNTLMN--GYCLRMEVVEAR 356

Query: 556 AVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAF 615
            VF  M  K  +PD   + +LV+ + KA  + +A + ++ M   GL P+  + N+L+S  
Sbjct: 357 KVFEVMISKGRMPDVFSFSILVNGYCKAKRIDEAKQLFDEMTHRGLIPDTVSYNTLISGL 416

Query: 616 LRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTE 652
            +  +  +A  L + M + G  P+L TY++LL C ++
Sbjct: 417 CQARRPLEAEELFKDMHSNGYPPNLVTYSILLDCLSK 453



 Score =  129 bits (325), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 97/410 (23%), Positives = 181/410 (44%), Gaps = 35/410 (8%)

Query: 370 LGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPD 429
           L R + +  +  L  QM   G   +V++   LI+ + R  +++    V  ++  +G EP+
Sbjct: 101 LVRMKHYKTVVSLSKQMEMAGISHDVLSLTILINCFCRLCHVDYGFSVLGKIIKLGLEPN 160

Query: 430 RVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFC 489
            +T+ TLI+     G +  A++++  M A G  P+  +YS+II  L + G      +L  
Sbjct: 161 VITFSTLINGFCIEGKIGRAIELFDVMVARGYKPNVHSYSIIIKGLCRVGKTTEVIKLLE 220

Query: 490 EMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCG 549
            M   GC P++V YN ++    K R    A+ ++  M+  G  P  VTY+ ++  L + G
Sbjct: 221 HMKVVGCEPDVVIYNTIVDRLCKDRLVNEAVHIFCKMKGTGILPTVVTYTSLIHGLRNLG 280

Query: 550 YLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCN 609
              EA  +  EM+  N +PD   + +L+D+  K G V +A    + M + G+ P+V T N
Sbjct: 281 RWKEAFGLLNEMKGGNIMPDLVAFSVLIDIMCKEGEVSEARVILKTMTEMGVEPDVATYN 340

Query: 610 SLLSAF-LRV---------------GQLSDAY-------------------HLLQGMLNL 634
           +L++ + LR+               G++ D +                    L   M + 
Sbjct: 341 TLMNGYCLRMEVVEARKVFEVMISKGRMPDVFSFSILVNGYCKAKRIDEAKQLFDEMTHR 400

Query: 635 GLKPSLQTYTLLLSCCTEARSPYDMGFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHV 694
           GL P   +Y  L+S   +AR P +     + M  +G+P ++   S+       Q   D  
Sbjct: 401 GLIPDTVSYNTLISGLCQARRPLEAEELFKDMHSNGYPPNLVTYSILLDCLSKQGYLDQA 460

Query: 695 GSFLEMMHSEDRESKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPD 744
                 M +   +      + ++D + K G  ++A  ++   + K + P+
Sbjct: 461 MGLFRAMENSGLKPDLVTYNIMIDGMCKYGKFKDARELFAELSVKGLQPN 510



 Score =  115 bits (288), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 67/218 (30%), Positives = 115/218 (52%)

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
           + G + D  TY T++       +     K+ + M+  G  P+V +++ L++ Y +A  ++
Sbjct: 329 EMGVEPDVATYNTLMNGYCLRMEVVEARKVFEVMISKGRMPDVFSFSILVNGYCKAKRID 388

Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
           EA  +F +M   G  PD V+Y TLI    +A     A +++K M + G  P+  TYS+++
Sbjct: 389 EAKQLFDEMTHRGLIPDTVSYNTLISGLCQARRPLEAEELFKDMHSNGYPPNLVTYSILL 448

Query: 473 NCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFE 532
           +CL K G+L  A  LF  M N G  P+LVTYNIMI    K   ++ A +L+ ++   G +
Sbjct: 449 DCLSKQGYLDQAMGLFRAMENSGLKPDLVTYNIMIDGMCKYGKFKDARELFAELSVKGLQ 508

Query: 533 PDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDE 570
           P+    +  ++ +   G LDEA   F +M + +  P +
Sbjct: 509 PNNWVCTPTIDGVCKGGLLDEAHKAFRQMEKDDCSPAQ 546



 Score =  112 bits (281), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 90/358 (25%), Positives = 160/358 (44%), Gaps = 23/358 (6%)

Query: 372 RARQFGAINKLL---DQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEP 428
           + R F  IN  L   + MV     P++V +  L  +  R  +    + + KQM++ G   
Sbjct: 65  KNRTFRNINDALSAFNHMVNTNPLPSIVKFGELFSALVRMKHYKTVVSLSKQMEMAGISH 124

Query: 429 DRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLF 488
           D ++   LI+   +   +D    +  K+   GL P+  T+S +IN     G +  A +LF
Sbjct: 125 DVLSLTILINCFCRLCHVDYGFSVLGKIIKLGLEPNVITFSTLINGFCIEGKIGRAIELF 184

Query: 489 CEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHC 548
             MV +G  PN+ +Y+I+I    +       +KL   M+  G EPD V Y+ +++ L   
Sbjct: 185 DVMVARGYKPNVHSYSIIIKGLCRVGKTTEVIKLLEHMKVVGCEPDVVIYNTIVDRLCKD 244

Query: 549 GYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTC 608
             ++EA  +F +M+    +P    Y  L+      G  ++A+     M    + P++   
Sbjct: 245 RLVNEAVHIFCKMKGTGILPTVVTYTSLIHGLRNLGRWKEAFGLLNEMKGGNIMPDLVAF 304

Query: 609 NSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTY-TLLLSCC-----TEARSPYDMGFC 662
           + L+    + G++S+A  +L+ M  +G++P + TY TL+   C      EAR  +     
Sbjct: 305 SVLIDIMCKEGEVSEARVILKTMTEMGVEPDVATYNTLMNGYCLRMEVVEARKVF----- 359

Query: 663 HELMAVSGHPAHMFLLSMPSPG-PDGQNVRDHVGSFLEMMHSEDRESKRGLVDAVVDF 719
            E+M   G    +F  S+   G    + + +    F EM H       RGL+   V +
Sbjct: 360 -EVMISKGRMPDVFSFSILVNGYCKAKRIDEAKQLFDEMTH-------RGLIPDTVSY 409



 Score = 80.9 bits (198), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 49/155 (31%), Positives = 80/155 (51%), Gaps = 6/155 (3%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           G   D  +Y T++  L +AR+     +L   M  +G  PN+VTY+ L+    +  YL++A
Sbjct: 401 GLIPDTVSYNTLISGLCQARRPLEAEELFKDMHSNGYPPNLVTYSILLDCLSKQGYLDQA 460

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
           + +F+ M+  G +PD VTY  +ID   K G    A +++ ++   GL P+ +  +  I+ 
Sbjct: 461 MGLFRAMENSGLKPDLVTYNIMIDGMCKYGKFKDARELFAELSVKGLQPNNWVCTPTIDG 520

Query: 475 LGKAGHLQAAHQLFCEMVN------QGCIPNLVTY 503
           + K G L  AH+ F +M        QGCI    TY
Sbjct: 521 VCKGGLLDEAHKAFRQMEKDDCSPAQGCINGRATY 555


>gi|449524916|ref|XP_004169467.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At1g74580-like [Cucumis
           sativus]
          Length = 877

 Score =  147 bits (370), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 96/307 (31%), Positives = 157/307 (51%), Gaps = 5/307 (1%)

Query: 363 YTTMVGILGRARQFGAIN---KLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFK 419
           +T  + I G  R+ GAI+   +LL+ +V +G  P+V++YN LI  + + + L EA     
Sbjct: 252 FTFNIFIQGLCRK-GAIDEAARLLESIVSEGLTPDVISYNTLICGFCKHSKLVEAECYLH 310

Query: 420 QMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAG 479
           +M   G EP+  TY T+I+   KAG +  A  + +     G  PD FTYS +IN L   G
Sbjct: 311 KMVNSGVEPNEFTYNTIINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGLCNDG 370

Query: 480 HLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYS 539
            +  A  +F E + +G   +++ YN ++   +K      AL+L +DM   G  PD  TY+
Sbjct: 371 DMNRAMAVFYEAMEKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYN 430

Query: 540 IVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQA 599
           +V+  L   G L +A  +  +   K  +PD   +  L+D + K  N+ KA E  + ML  
Sbjct: 431 LVVNGLCKMGCLSDANGILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSH 490

Query: 600 GLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL-SCCTEARSPYD 658
           G+ P+V T N+LL+   +  +L +     + ML  G  P++ TY +L+ S C + +    
Sbjct: 491 GITPDVITYNTLLNGLCKARKLDNVVDTFKAMLEKGCTPNIITYNILIESFCKDRKVSEA 550

Query: 659 MGFCHEL 665
           M    E+
Sbjct: 551 MELFKEM 557



 Score =  146 bits (369), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 88/318 (27%), Positives = 165/318 (51%), Gaps = 3/318 (0%)

Query: 333 VLKQLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQ 392
           V++   D   AL  FN ++ + GFKH   TY  M+  LG   +F A+  +L +M R    
Sbjct: 13  VIRYQNDPLNALKMFNQVKTEDGFKHTLETYKCMIEKLGLHGKFEAMEDVLAEM-RKNVD 71

Query: 393 PNVV--TYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAM 450
             ++   Y  ++  YGR   + EA++VF++M    CEP   +Y  +++I  + G+   A 
Sbjct: 72  SKMLEGVYIGIMRDYGRKGKVQEAVNVFERMDFYDCEPSVQSYNAIMNILVEYGYFSQAH 131

Query: 451 DMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQ 510
            +Y +M+  G+ PD +T+++ +      G   AA +L   M  QGC  N V+Y  +I+  
Sbjct: 132 KVYMRMKDIGIYPDVYTHTIRMKSFCITGRPTAALRLLNNMPGQGCEFNAVSYCAVISGF 191

Query: 511 AKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDE 570
            K      A  L+ +M   G  PD +T++ ++ VL   G + E+E +F+++ ++   P+ 
Sbjct: 192 YKENCQIEAYHLFDEMLKQGICPDILTFNKLIHVLCKKGNVQESEKLFSKVMKRGVCPNL 251

Query: 571 PVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQG 630
             + + +    + G + +A    E+++  GL P+V + N+L+  F +  +L +A   L  
Sbjct: 252 FTFNIFIQGLCRKGAIDEAARLLESIVSEGLTPDVISYNTLICGFCKHSKLVEAECYLHK 311

Query: 631 MLNLGLKPSLQTYTLLLS 648
           M+N G++P+  TY  +++
Sbjct: 312 MVNSGVEPNEFTYNTIIN 329



 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 90/323 (27%), Positives = 150/323 (46%), Gaps = 36/323 (11%)

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
           + GFKH    Y T+V  L +        +L+  M+  GC P++ TYN +++   +   L+
Sbjct: 384 EKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCLS 443

Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
           +A  +       GC PD  T+ TLID + K   +D A+++   M + G++PD  TY+ ++
Sbjct: 444 DANGILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVITYNTLL 503

Query: 473 NCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFE 532
           N L KA  L      F  M+ +GC PN++TYNI+I    K R    A++L+++M+  G  
Sbjct: 504 NGLCKARKLDNVVDTFKAMLEKGCTPNIITYNILIESFCKDRKVSEAMELFKEMKTRGLT 563

Query: 533 PDKVTYSIVMEVLGHCGYLDE------------------------------------AEA 556
           PD VT   ++  L   G LD+                                    AE 
Sbjct: 564 PDIVTLCTLICGLCSNGELDKAYELFVTIEKEYKFSYSTAIFNIMINAFCXKLNVSMAEK 623

Query: 557 VFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFL 616
           +F +M   +  PD   Y +++D + K GN+  A  +    +  GL P+  TC  +L+   
Sbjct: 624 LFHKMGGSDCAPDNYTYRVMIDSYCKTGNIDLAHTFLLENISKGLVPSFTTCGKVLNCLC 683

Query: 617 RVGQLSDAYHLLQGMLNLGLKPS 639
              +LS+A  ++  M+  G+ P 
Sbjct: 684 VTHRLSEAVVIINLMVQNGIVPE 706



 Score =  135 bits (339), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 80/275 (29%), Positives = 137/275 (49%)

Query: 354 AGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNE 413
           +G + +E TY T++    +A      +K+L   +  G  P+  TY+ LI+       +N 
Sbjct: 315 SGVEPNEFTYNTIINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNR 374

Query: 414 ALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIIN 473
           A+ VF +    G +   + Y TL+   +K G +  A+ + K M   G SPD +TY++++N
Sbjct: 375 AMAVFYEAMEKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVN 434

Query: 474 CLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEP 533
            L K G L  A+ +  + + +GCIP++ T+N +I    K RN   A+++   M + G  P
Sbjct: 435 GLCKMGCLSDANGILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGITP 494

Query: 534 DKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWY 593
           D +TY+ ++  L     LD     F  M  K   P+   Y +L++ + K   V +A E +
Sbjct: 495 DVITYNTLLNGLCKARKLDNVVDTFKAMLEKGCTPNIITYNILIESFCKDRKVSEAMELF 554

Query: 594 EAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLL 628
           + M   GL P++ T  +L+      G+L  AY L 
Sbjct: 555 KEMKTRGLTPDIVTLCTLICGLCSNGELDKAYELF 589



 Score =  131 bits (329), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 82/266 (30%), Positives = 137/266 (51%)

Query: 382 LLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHA 441
           L D+M++ G  P+++T+N+LIH   +   + E+  +F ++   G  P+  T+   I    
Sbjct: 203 LFDEMLKQGICPDILTFNKLIHVLCKKGNVQESEKLFSKVMKRGVCPNLFTFNIFIQGLC 262

Query: 442 KAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLV 501
           + G +D A  + + + + GL+PD  +Y+ +I    K   L  A     +MVN G  PN  
Sbjct: 263 RKGAIDEAARLLESIVSEGLTPDVISYNTLICGFCKHSKLVEAECYLHKMVNSGVEPNEF 322

Query: 502 TYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEM 561
           TYN +I    KA   Q+A K+ RD    GF PD+ TYS ++  L + G ++ A AVF E 
Sbjct: 323 TYNTIINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAMAVFYEA 382

Query: 562 RRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQL 621
             K +     +Y  LV    K G V +A +  + M++ G  P++ T N +++   ++G L
Sbjct: 383 MEKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCL 442

Query: 622 SDAYHLLQGMLNLGLKPSLQTYTLLL 647
           SDA  +L   +  G  P + T+  L+
Sbjct: 443 SDANGILNDAIAKGCIPDIFTFNTLI 468



 Score =  129 bits (325), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 91/355 (25%), Positives = 172/355 (48%), Gaps = 12/355 (3%)

Query: 304 ILRQWKWGPLAEEALGNTNYSMDAYQAN---QVLKQLQDHTVALGFFN-----WLR-RQA 354
           I+R +      +EA+ N    MD Y      Q    + +  V  G+F+     ++R +  
Sbjct: 82  IMRDYGRKGKVQEAV-NVFERMDFYDCEPSVQSYNAIMNILVEYGYFSQAHKVYMRMKDI 140

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           G   D +T+T  +       +  A  +LL+ M   GC+ N V+Y  +I  + + N   EA
Sbjct: 141 GIYPDVYTHTIRMKSFCITGRPTAALRLLNNMPGQGCEFNAVSYCAVISGFYKENCQIEA 200

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
             +F +M   G  PD +T+  LI +  K G +  +  ++ K+   G+ P+ FT+++ I  
Sbjct: 201 YHLFDEMLKQGICPDILTFNKLIHVLCKKGNVQESEKLFSKVMKRGVCPNLFTFNIFIQG 260

Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPD 534
           L + G +  A +L   +V++G  P++++YN +I    K      A      M N+G EP+
Sbjct: 261 LCRKGAIDEAARLLESIVSEGLTPDVISYNTLICGFCKHSKLVEAECYLHKMVNSGVEPN 320

Query: 535 KVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWE-WY 593
           + TY+ ++      G +  A+ +  +   K ++PDE  Y  L++     G++ +A   +Y
Sbjct: 321 EFTYNTIINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAMAVFY 380

Query: 594 EAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
           EAM + G + ++   N+L+    + G +  A  L++ M+  G  P + TY L+++
Sbjct: 381 EAM-EKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVN 434



 Score =  102 bits (253), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 66/217 (30%), Positives = 104/217 (47%), Gaps = 1/217 (0%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           G   D  TY T++  L +AR+   +      M+  GC PN++TYN LI S+ +   ++EA
Sbjct: 491 GITPDVITYNTLLNGLCKARKLDNVVDTFKAMLEKGCTPNIITYNILIESFCKDRKVSEA 550

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAA-GLSPDTFTYSVIIN 473
           +++FK+M+  G  PD VT CTLI      G LD A +++  ++     S  T  ++++IN
Sbjct: 551 MELFKEMKTRGLTPDIVTLCTLICGLCSNGELDKAYELFVTIEKEYKFSYSTAIFNIMIN 610

Query: 474 CLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEP 533
                 ++  A +LF +M    C P+  TY +MI    K  N   A     +  + G  P
Sbjct: 611 AFCXKLNVSMAEKLFHKMGGSDCAPDNYTYRVMIDSYCKTGNIDLAHTFLLENISKGLVP 670

Query: 534 DKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDE 570
              T   V+  L     L EA  +   M +   VP+E
Sbjct: 671 SFTTCGKVLNCLCVTHRLSEAVVIINLMVQNGIVPEE 707



 Score = 46.6 bits (109), Expect = 0.055,   Method: Compositional matrix adjust.
 Identities = 30/104 (28%), Positives = 49/104 (47%)

Query: 398 YNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQ 457
           +N +I+++     ++ A  +F +M    C PD  TY  +ID + K G +D+A     +  
Sbjct: 605 FNIMINAFCXKLNVSMAEKLFHKMGGSDCAPDNYTYRVMIDSYCKTGNIDLAHTFLLENI 664

Query: 458 AAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLV 501
           + GL P   T   ++NCL     L  A  +   MV  G +P  V
Sbjct: 665 SKGLVPSFTTCGKVLNCLCVTHRLSEAVVIINLMVQNGIVPEEV 708


>gi|115469638|ref|NP_001058418.1| Os06g0690900 [Oryza sativa Japonica Group]
 gi|52076717|dbj|BAD45630.1| putative fertility restorer [Oryza sativa Japonica Group]
 gi|53793285|dbj|BAD54507.1| putative fertility restorer [Oryza sativa Japonica Group]
 gi|113596458|dbj|BAF20332.1| Os06g0690900 [Oryza sativa Japonica Group]
          Length = 991

 Score =  147 bits (370), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 96/321 (29%), Positives = 149/321 (46%), Gaps = 19/321 (5%)

Query: 350 LRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRAN 409
           +  Q G K DEH Y  +   L +A   G   +    +VR G     V Y  LI  + +A 
Sbjct: 557 MMEQNGLKPDEHAYAVLTDALCKA---GRAEEAYSFIVRKGVALTKVYYTTLIDGFSKAG 613

Query: 410 YLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYS 469
             + A  + ++M   GC PD  TY  L+    K   L+ A+ +  +M   G+    F Y+
Sbjct: 614 NTDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRGIKCTIFAYT 673

Query: 470 VIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNA 529
           ++I+ + + G    A +++ EM + G  P+  TY + I    K    + A  L   M+  
Sbjct: 674 ILIDEMLREGKHDHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGRLEDAEDLILKMERE 733

Query: 530 GFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVD--LWGKAGNVR 587
           G  PD VTY+I+++  GH GY+D A +    M   +  P+   Y LL+   L G    VR
Sbjct: 734 GVAPDVVTYNILIDGCGHMGYIDRAFSTLKRMVGASCEPNYWTYCLLLKHLLKGNLAYVR 793

Query: 588 KA--------------WEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLN 633
                           W+  E M++ GL P V T +SL++ F + G+L +A  LL  M  
Sbjct: 794 SVDTSGMWNLIELDITWQLLERMVKHGLNPTVTTYSSLIAGFCKAGRLEEACLLLDHMCG 853

Query: 634 LGLKPSLQTYTLLLSCCTEAR 654
            GL P+   YTLL+ CC + +
Sbjct: 854 KGLSPNEDIYTLLIKCCCDTK 874



 Score =  140 bits (353), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 81/295 (27%), Positives = 156/295 (52%), Gaps = 3/295 (1%)

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
           + GF     T+T ++     A +F    ++ ++M+   C+ ++  + +LI+S  + + L 
Sbjct: 385 KEGFTPTVVTFTNLINGYCMAEKFDDALRMKNKMMSSKCKLDLQVFGKLINSLIKKDRLK 444

Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
           EA ++  ++   G  P+ +TY ++ID + K+G +D+A+++ K M+  G  P+ +TY+ ++
Sbjct: 445 EAKELLNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMMERDGCQPNAWTYNSLM 504

Query: 473 NCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFE 532
             L K   L  A  L  +M   G IPN++TY  ++  Q    ++ +A +L+  M+  G +
Sbjct: 505 YGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDEHDFDNAFRLFEMMEQNGLK 564

Query: 533 PDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEW 592
           PD+  Y+++ + L   G    AE  ++ + RK     +  Y  L+D + KAGN   A   
Sbjct: 565 PDEHAYAVLTDALCKAG---RAEEAYSFIVRKGVALTKVYYTTLIDGFSKAGNTDFAATL 621

Query: 593 YEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
            E M+  G  P+  T + LL A  +  +L++A  +L  M   G+K ++  YT+L+
Sbjct: 622 IERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRGIKCTIFAYTILI 676



 Score =  129 bits (324), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 106/400 (26%), Positives = 179/400 (44%), Gaps = 10/400 (2%)

Query: 350 LRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRAN 409
           L  + G   D+ TY T++  L   +   A  +LL+  V++G  P VVT+  LI+ Y  A 
Sbjct: 348 LMEKNGCHPDDWTYNTLIYGLCDQKTEEA-EELLNNAVKEGFTPTVVTFTNLINGYCMAE 406

Query: 410 YLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYS 469
             ++AL +  +M    C+ D   +  LI+   K   L  A ++  ++ A GL P+  TY+
Sbjct: 407 KFDDALRMKNKMMSSKCKLDLQVFGKLINSLIKKDRLKEAKELLNEISANGLVPNVITYT 466

Query: 470 VIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNA 529
            II+   K+G +  A ++   M   GC PN  TYN ++    K +    A+ L   MQ  
Sbjct: 467 SIIDGYCKSGKVDIALEVLKMMERDGCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKD 526

Query: 530 GFEPDKVTYSIVMEVLGHCGY--LDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVR 587
           G  P+ +TY+ +++  G C     D A  +F  M +    PDE  Y +L D   KAG   
Sbjct: 527 GIIPNVITYTTLLQ--GQCDEHDFDNAFRLFEMMEQNGLKPDEHAYAVLTDALCKAG--- 581

Query: 588 KAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
           +A E Y  +++ G+        +L+  F + G    A  L++ M++ G  P   TY++LL
Sbjct: 582 RAEEAYSFIVRKGVALTKVYYTTLIDGFSKAGNTDFAATLIERMIDEGCTPDSYTYSVLL 641

Query: 648 -SCCTEARSPYDMGFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDR 706
            + C + R    +    + M++ G    +F  ++       +   DH       M S   
Sbjct: 642 HALCKQKRLNEALPILDQ-MSLRGIKCTIFAYTILIDEMLREGKHDHAKRMYNEMTSSGH 700

Query: 707 ESKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAV 746
           +         ++   K G  E+A  +     ++ V PD V
Sbjct: 701 KPSATTYTVFINSYCKEGRLEDAEDLILKMEREGVAPDVV 740



 Score =  112 bits (280), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 97/380 (25%), Positives = 164/380 (43%), Gaps = 31/380 (8%)

Query: 296 NVVESVSRIL--RQWKWGPLAEEALGNTN--YSMDAYQANQVLKQLQDHTVALGFFNWLR 351
           +VV  + RIL  R+W  G   +    +    +  D ++A+    +      AL FF WL 
Sbjct: 25  DVVAELGRILSTRRWNKGRAYKRLAPSVTAAHVADLFRADSTAPE---PATALAFFEWLA 81

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVR------------DGCQPNVVT-- 397
           R+ GF+H   ++  ++ +L R R      +L+  M+             D  Q    T  
Sbjct: 82  RRDGFRHTADSHAALLHLLSRRRAPAQYERLVVSMLNCSDTAEDMRVSADAIQAIRRTGS 141

Query: 398 ---------YNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDV 448
                    YN  + S  R +       V+ Q+   G  PD VTY T+I  + K G L  
Sbjct: 142 ARLALSPKCYNFALRSLARFDMTEYMGRVYSQLVQDGLLPDTVTYNTMIKSYCKEGDLTT 201

Query: 449 AMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIA 508
           A   ++ +   GL P+TFT + ++    + G L+ A  LF  M   GC  N  +Y I+I 
Sbjct: 202 AHRYFRLLLEGGLEPETFTCNALVLGYCRTGELRKACWLFLMMPLMGCQRNEYSYTILIQ 261

Query: 509 LQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVP 568
               A+  + AL L+  M+  G  P+   ++ ++  L   G + +A  +F  M +   VP
Sbjct: 262 GLCDAKCVRKALVLFLMMKRDGCSPNVRAFTFLISGLCKSGRVGDARLLFDAMPQNGVVP 321

Query: 569 DEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLL 628
               Y  ++  + K G +  A +  E M + G  P+  T N+L+       +  +A  LL
Sbjct: 322 SVMTYNAMIVGYSKLGRMNDALKIKELMEKNGCHPDDWTYNTLIYGLCD-QKTEEAEELL 380

Query: 629 QGMLNLGLKPSLQTYTLLLS 648
              +  G  P++ T+T L++
Sbjct: 381 NNAVKEGFTPTVVTFTNLIN 400



 Score =  110 bits (274), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 98/415 (23%), Positives = 170/415 (40%), Gaps = 38/415 (9%)

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
           Q G   D  TY TM+    +       ++    ++  G +P   T N L+  Y R   L 
Sbjct: 176 QDGLLPDTVTYNTMIKSYCKEGDLTTAHRYFRLLLEGGLEPETFTCNALVLGYCRTGELR 235

Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
           +A  +F  M ++GC+ +  +Y  LI     A  +  A+ ++  M+  G SP+   ++ +I
Sbjct: 236 KACWLFLMMPLMGCQRNEYSYTILIQGLCDAKCVRKALVLFLMMKRDGCSPNVRAFTFLI 295

Query: 473 NCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFE 532
           + L K+G +  A  LF  M   G +P+++TYN MI   +K      ALK+   M+  G  
Sbjct: 296 SGLCKSGRVGDARLLFDAMPQNGVVPSVMTYNAMIVGYSKLGRMNDALKIKELMEKNGCH 355

Query: 533 PDKVTYSIVMEVLGHCGY-LDEAEAVFAEMRRKNWVP----------------------- 568
           PD  TY+ +  + G C    +EAE +     ++ + P                       
Sbjct: 356 PDDWTYNTL--IYGLCDQKTEEAEELLNNAVKEGFTPTVVTFTNLINGYCMAEKFDDALR 413

Query: 569 ------------DEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFL 616
                       D  V+G L++   K   +++A E    +   GL PNV T  S++  + 
Sbjct: 414 MKNKMMSSKCKLDLQVFGKLINSLIKKDRLKEAKELLNEISANGLVPNVITYTSIIDGYC 473

Query: 617 RVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGFCHELMAVSGHPAHMF 676
           + G++  A  +L+ M   G +P+  TY  L+    + +  +        M   G   ++ 
Sbjct: 474 KSGKVDIALEVLKMMERDGCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVI 533

Query: 677 LLSMPSPGPDGQNVRDHVGSFLEMMHSEDRESKRGLVDAVVDFLHKSGLKEEAGS 731
             +    G   ++  D+     EMM     +        + D L K+G  EEA S
Sbjct: 534 TYTTLLQGQCDEHDFDNAFRLFEMMEQNGLKPDEHAYAVLTDALCKAGRAEEAYS 588



 Score =  108 bits (269), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 71/259 (27%), Positives = 115/259 (44%), Gaps = 16/259 (6%)

Query: 354 AGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNE 413
           +G K    TYT  +    +  +      L+ +M R+G  P+VVTYN LI   G   Y++ 
Sbjct: 698 SGHKPSATTYTVFINSYCKEGRLEDAEDLILKMEREGVAPDVVTYNILIDGCGHMGYIDR 757

Query: 414 ALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGF----------------LDVAMDMYKKMQ 457
           A    K+M    CEP+  TYC L+    K                   LD+   + ++M 
Sbjct: 758 AFSTLKRMVGASCEPNYWTYCLLLKHLLKGNLAYVRSVDTSGMWNLIELDITWQLLERMV 817

Query: 458 AAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQ 517
             GL+P   TYS +I    KAG L+ A  L   M  +G  PN   Y ++I      + ++
Sbjct: 818 KHGLNPTVTTYSSLIAGFCKAGRLEEACLLLDHMCGKGLSPNEDIYTLLIKCCCDTKFFE 877

Query: 518 SALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLV 577
            AL     M   GF+P   +Y +++  L + G  ++ +++F ++    +  DE  + +L 
Sbjct: 878 KALSFVSIMSECGFQPQLESYRLLVVGLCNEGDFEKVKSLFCDLLELGYNHDEVAWKILN 937

Query: 578 DLWGKAGNVRKAWEWYEAM 596
           D   KAG V   ++    M
Sbjct: 938 DGLLKAGYVDICFQMLSIM 956



 Score =  106 bits (264), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 79/324 (24%), Positives = 129/324 (39%), Gaps = 51/324 (15%)

Query: 363 YTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQ 422
           YTT++    +A        L+++M+ +GC P+  TY+ L+H+  +   LNEAL +  QM 
Sbjct: 602 YTTLIDGFSKAGNTDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMS 661

Query: 423 VVGCE-----------------------------------PDRVTYCTLIDIHAKAGFLD 447
           + G +                                   P   TY   I+ + K G L+
Sbjct: 662 LRGIKCTIFAYTILIDEMLREGKHDHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGRLE 721

Query: 448 VAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMI 507
            A D+  KM+  G++PD  TY+++I+  G  G++  A      MV   C PN  TY +++
Sbjct: 722 DAEDLILKMEREGVAPDVVTYNILIDGCGHMGYIDRAFSTLKRMVGASCEPNYWTYCLLL 781

Query: 508 ALQAKA-----RNYQSA-----------LKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYL 551
               K      R+  ++            +L   M   G  P   TYS ++      G L
Sbjct: 782 KHLLKGNLAYVRSVDTSGMWNLIELDITWQLLERMVKHGLNPTVTTYSSLIAGFCKAGRL 841

Query: 552 DEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSL 611
           +EA  +   M  K   P+E +Y LL+          KA  +   M + G +P + +   L
Sbjct: 842 EEACLLLDHMCGKGLSPNEDIYTLLIKCCCDTKFFEKALSFVSIMSECGFQPQLESYRLL 901

Query: 612 LSAFLRVGQLSDAYHLLQGMLNLG 635
           +      G       L   +L LG
Sbjct: 902 VVGLCNEGDFEKVKSLFCDLLELG 925


>gi|449462483|ref|XP_004148970.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Cucumis sativus]
          Length = 917

 Score =  147 bits (370), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 87/280 (31%), Positives = 145/280 (51%), Gaps = 17/280 (6%)

Query: 391 CQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAM 450
           C+PN ++Y+ +I    +    +EA ++FK+M+ +G  PD ++Y +LI    ++G    A 
Sbjct: 635 CKPNAISYSIIIDGLCKCGREDEARELFKEMKALGVIPDVISYTSLIHGFCRSGKWKDAK 694

Query: 451 DMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQ 510
            ++ +M   G+ PD  T+SV+I+ L K G +  A++L   M+ +GCIPN VTY  ++   
Sbjct: 695 YLFNEMVDIGVQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQRGCIPNTVTYTTLVKGL 754

Query: 511 AKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRR------K 564
                   A +L+  MQ  G  PD VTY  +M+ L   G +  A  +  +M         
Sbjct: 755 CMNDRISEATQLFMKMQKLGCLPDVVTYGTLMKGLCQTGNIKTALELHKKMLSDTGQYGT 814

Query: 565 NWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDA 624
           N+ PD   Y +++D   K G   +A E ++ M   G+ PNV +  SL+  F R G+L DA
Sbjct: 815 NFKPDVISYSIIIDGLCKHGREDEARELFKEMKALGVIPNVISYTSLIHGFCRSGKLEDA 874

Query: 625 YHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGFCHE 664
            HL   M++ G++ +  TY++++            GFC E
Sbjct: 875 KHLFNEMVDQGVQLNAVTYSVMIH-----------GFCKE 903



 Score =  135 bits (340), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 102/401 (25%), Positives = 187/401 (46%), Gaps = 14/401 (3%)

Query: 359 DEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVF 418
           D  T + ++ IL +  +    N+LL+ M++ GC  ++VTY+ LI      + ++EA  +F
Sbjct: 346 DVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMEHRISEATWLF 405

Query: 419 KQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKM------QAAGLSPDTFTYSVII 472
             MQ +GC PD +TY TL+    + G +++A+ ++++M            P   +YS+II
Sbjct: 406 MSMQKLGCRPDAITYGTLMKGLCQTGNINIALQLHQEMLNDTGRYGIKCKPTLISYSIII 465

Query: 473 NCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFE 532
           + L K      A +LF EM  QG +P++++Y  +I     +  ++ A  L+ +M + G +
Sbjct: 466 DGLCKDRREDEARELFEEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCLFNEMLDVGIQ 525

Query: 533 PDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEW 592
           PD  T S+++++L   G + EA  +   + ++  + D      LV        + KA + 
Sbjct: 526 PDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCILDVVTCTTLVKGLCMKHRISKATQL 585

Query: 593 YEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLN------LGLKPSLQTYTLL 646
           +  M + G  PNV TC +L+    + G +  A  L + ML+      +  KP+  +Y+++
Sbjct: 586 FLKMQKLGCMPNVVTCATLMKGLCQSGNIKIALELHKNMLSDTSPYGINCKPNAISYSII 645

Query: 647 LS-CCTEARSPYDMGFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSED 705
           +   C   R         E+ A+   P  +   S+          +D    F EM+    
Sbjct: 646 IDGLCKCGREDEARELFKEMKALGVIPDVISYTSLIHGFCRSGKWKDAKYLFNEMVDI-G 704

Query: 706 RESKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAV 746
            +        ++D L K G   EA  + EV  Q+   P+ V
Sbjct: 705 VQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQRGCIPNTV 745



 Score =  132 bits (332), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 86/315 (27%), Positives = 154/315 (48%), Gaps = 14/315 (4%)

Query: 346 FFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSY 405
            FN +    G + D  T   ++ +  +  +    N+LL+ MV  GC  ++VTY+ LI   
Sbjct: 222 LFNEML-DVGIQPDVTTSGVLIDMFCKEGKVIEANELLEVMVHRGCILDIVTYSTLIKGL 280

Query: 406 GRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQ-------A 458
              + ++EA  +F  M+ +GC PD + Y TL+    + G +++A+ ++++M         
Sbjct: 281 CMKHRISEATQLFMSMKKLGCRPDAIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQYGI 340

Query: 459 AGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQS 518
             + PD  T S++I+ L K G +  A++L   M+ +GCI ++VTY+ +I           
Sbjct: 341 KCIRPDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMEHRISE 400

Query: 519 ALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKN------WVPDEPV 572
           A  L+  MQ  G  PD +TY  +M+ L   G ++ A  +  EM            P    
Sbjct: 401 ATWLFMSMQKLGCRPDAITYGTLMKGLCQTGNINIALQLHQEMLNDTGRYGIKCKPTLIS 460

Query: 573 YGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGML 632
           Y +++D   K     +A E +E M   G+ P+V +  +L+  F   G+   A  L   ML
Sbjct: 461 YSIIIDGLCKDRREDEARELFEEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCLFNEML 520

Query: 633 NLGLKPSLQTYTLLL 647
           ++G++P + T ++L+
Sbjct: 521 DVGIQPDVTTSSVLI 535



 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 78/276 (28%), Positives = 144/276 (52%), Gaps = 8/276 (2%)

Query: 362 TYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQM 421
           +Y+ ++  L +  +     +L  +M   G  P+V++Y  LIH + R+    +A  +F +M
Sbjct: 641 SYSIIIDGLCKCGREDEARELFKEMKALGVIPDVISYTSLIHGFCRSGKWKDAKYLFNEM 700

Query: 422 QVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHL 481
             +G +PD  T+  LID+  K G +  A ++ + M   G  P+T TY+ ++  L     +
Sbjct: 701 VDIGVQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQRGCIPNTVTYTTLVKGLCMNDRI 760

Query: 482 QAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQN------AGFEPDK 535
             A QLF +M   GC+P++VTY  ++    +  N ++AL+L++ M +        F+PD 
Sbjct: 761 SEATQLFMKMQKLGCLPDVVTYGTLMKGLCQTGNIKTALELHKKMLSDTGQYGTNFKPDV 820

Query: 536 VTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEA 595
           ++YSI+++ L   G  DEA  +F EM+    +P+   Y  L+  + ++G +  A   +  
Sbjct: 821 ISYSIIIDGLCKHGREDEARELFKEMKALGVIPNVISYTSLIHGFCRSGKLEDAKHLFNE 880

Query: 596 MLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGM 631
           M+  G++ N  T + ++  F + GQ+  A  L Q M
Sbjct: 881 MVDQGVQLNAVTYSVMIHGFCKEGQIDKA--LFQKM 914



 Score =  130 bits (327), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 91/350 (26%), Positives = 167/350 (47%), Gaps = 50/350 (14%)

Query: 348 NWL---RRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRD------GCQPNVVTY 398
            WL    ++ G + D  TY T++  L +        +L  +M+ D       C+P +++Y
Sbjct: 402 TWLFMSMQKLGCRPDAITYGTLMKGLCQTGNINIALQLHQEMLNDTGRYGIKCKPTLISY 461

Query: 399 NRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQA 458
           + +I    +    +EA ++F++M+  G  PD ++Y TLI     +G  + A  ++ +M  
Sbjct: 462 SIIIDGLCKDRREDEARELFEEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCLFNEMLD 521

Query: 459 AGLSPDTFTYSVIINCLGKAG-----------------------------------HLQA 483
            G+ PD  T SV+I+ L K G                                    +  
Sbjct: 522 VGIQPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCILDVVTCTTLVKGLCMKHRISK 581

Query: 484 AHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQN------AGFEPDKVT 537
           A QLF +M   GC+PN+VT   ++    ++ N + AL+L+++M +         +P+ ++
Sbjct: 582 ATQLFLKMQKLGCMPNVVTCATLMKGLCQSGNIKIALELHKNMLSDTSPYGINCKPNAIS 641

Query: 538 YSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAML 597
           YSI+++ L  CG  DEA  +F EM+    +PD   Y  L+  + ++G  + A   +  M+
Sbjct: 642 YSIIIDGLCKCGREDEARELFKEMKALGVIPDVISYTSLIHGFCRSGKWKDAKYLFNEMV 701

Query: 598 QAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
             G++P+V T + L+    + G++ +A  LL+ M+  G  P+  TYT L+
Sbjct: 702 DIGVQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQRGCIPNTVTYTTLV 751



 Score =  129 bits (325), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 83/310 (26%), Positives = 157/310 (50%), Gaps = 14/310 (4%)

Query: 359 DEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVF 418
           D  T + ++ IL +  +    N+LL+ M++ GC  ++VTY+ LI      + ++EA  +F
Sbjct: 53  DVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMEHRISEATWLF 112

Query: 419 KQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKM------QAAGLSPDTFTYSVII 472
             MQ +GC PD +TY TL+    + G +++A+ ++++M            P   +YS+II
Sbjct: 113 MSMQKLGCRPDAITYGTLMKGLCQTGNINIALQLHQEMLNDTGRYGIKCKPTLISYSIII 172

Query: 473 NCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFE 532
           + L K      A +LF EM  QG +P++++Y  +I     +  ++ A  L+ +M + G +
Sbjct: 173 DGLCKDRREDEARELFKEMKAQGMMPDVISYTSLIHGFCHSGKWEKAKCLFNEMLDVGIQ 232

Query: 533 PDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEW 592
           PD  T  +++++    G + EA  +   M  +  + D   Y  L+        + +A + 
Sbjct: 233 PDVTTSGVLIDMFCKEGKVIEANELLEVMVHRGCILDIVTYSTLIKGLCMKHRISEATQL 292

Query: 593 YEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLN----LGLK---PSLQTYTL 645
           + +M + G RP+     +L+    + G+++ A HL Q MLN     G+K   P + T ++
Sbjct: 293 FMSMKKLGCRPDAIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKCIRPDVTTSSM 352

Query: 646 LLSC-CTEAR 654
           L+   C E +
Sbjct: 353 LIDILCKEGK 362



 Score =  128 bits (322), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 87/316 (27%), Positives = 152/316 (48%), Gaps = 16/316 (5%)

Query: 348 NWL---RRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRD------GCQPNVVTY 398
            WL    ++ G + D  TY T++  L +        +L  +M+ D       C+P +++Y
Sbjct: 109 TWLFMSMQKLGCRPDAITYGTLMKGLCQTGNINIALQLHQEMLNDTGRYGIKCKPTLISY 168

Query: 399 NRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQA 458
           + +I    +    +EA ++FK+M+  G  PD ++Y +LI     +G  + A  ++ +M  
Sbjct: 169 SIIIDGLCKDRREDEARELFKEMKAQGMMPDVISYTSLIHGFCHSGKWEKAKCLFNEMLD 228

Query: 459 AGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQS 518
            G+ PD  T  V+I+   K G +  A++L   MV++GCI ++VTY+ +I           
Sbjct: 229 VGIQPDVTTSGVLIDMFCKEGKVIEANELLEVMVHRGCILDIVTYSTLIKGLCMKHRISE 288

Query: 519 ALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRR-------KNWVPDEP 571
           A +L+  M+  G  PD + Y  +M+ L   G ++ A  +  EM         K   PD  
Sbjct: 289 ATQLFMSMKKLGCRPDAIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKCIRPDVT 348

Query: 572 VYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGM 631
              +L+D+  K G V +A E  E M+Q G   ++ T ++L+       ++S+A  L   M
Sbjct: 349 TSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMEHRISEATWLFMSM 408

Query: 632 LNLGLKPSLQTYTLLL 647
             LG +P   TY  L+
Sbjct: 409 QKLGCRPDAITYGTLM 424



 Score =  127 bits (318), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 87/311 (27%), Positives = 146/311 (46%), Gaps = 15/311 (4%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYN---------RLI 402
           R AG   D  T+  ++  L   ++       +  ++R G  P++VTY+          LI
Sbjct: 2   RLAGLFPDSFTFNILINCLCNVKRVNEGLAAMAGIMRRGYIPDIVTYSIRPDVTTSSMLI 61

Query: 403 HSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLS 462
               +   + EA ++ + M   GC  D VTY TLI        +  A  ++  MQ  G  
Sbjct: 62  DILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMEHRISEATWLFMSMQKLGCR 121

Query: 463 PDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQ------GCIPNLVTYNIMIALQAKARNY 516
           PD  TY  ++  L + G++  A QL  EM+N        C P L++Y+I+I    K R  
Sbjct: 122 PDAITYGTLMKGLCQTGNINIALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLCKDRRE 181

Query: 517 QSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLL 576
             A +L+++M+  G  PD ++Y+ ++    H G  ++A+ +F EM      PD    G+L
Sbjct: 182 DEARELFKEMKAQGMMPDVISYTSLIHGFCHSGKWEKAKCLFNEMLDVGIQPDVTTSGVL 241

Query: 577 VDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGL 636
           +D++ K G V +A E  E M+  G   ++ T ++L+       ++S+A  L   M  LG 
Sbjct: 242 IDMFCKEGKVIEANELLEVMVHRGCILDIVTYSTLIKGLCMKHRISEATQLFMSMKKLGC 301

Query: 637 KPSLQTYTLLL 647
           +P    Y  L+
Sbjct: 302 RPDAIAYGTLM 312



 Score =  125 bits (314), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 104/413 (25%), Positives = 188/413 (45%), Gaps = 19/413 (4%)

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
           Q G   D  TY+T++  L    +      L   M + GC+P+ +TY  L+    +   +N
Sbjct: 82  QRGCILDIVTYSTLIKGLCMEHRISEATWLFMSMQKLGCRPDAITYGTLMKGLCQTGNIN 141

Query: 413 EALDVFKQM------QVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTF 466
            AL + ++M        + C+P  ++Y  +ID   K    D A +++K+M+A G+ PD  
Sbjct: 142 IALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLCKDRREDEARELFKEMKAQGMMPDVI 201

Query: 467 TYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDM 526
           +Y+ +I+    +G  + A  LF EM++ G  P++ T  ++I +  K      A +L   M
Sbjct: 202 SYTSLIHGFCHSGKWEKAKCLFNEMLDVGIQPDVTTSGVLIDMFCKEGKVIEANELLEVM 261

Query: 527 QNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNV 586
            + G   D VTYS +++ L     + EA  +F  M++    PD   YG L+    + G +
Sbjct: 262 VHRGCILDIVTYSTLIKGLCMKHRISEATQLFMSMKKLGCRPDAIAYGTLMKGLCQTGKI 321

Query: 587 RKAWEWYEAML----QAG---LRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPS 639
             A   ++ ML    Q G   +RP+V T + L+    + G++ +A  LL+ M+  G    
Sbjct: 322 NIALHLHQEMLNDTSQYGIKCIRPDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILD 381

Query: 640 LQTY-TLLLSCCTEARSPYDMGFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFL 698
           + TY TL+   C E R          +  +   P  +   ++        N+   +    
Sbjct: 382 IVTYSTLIKGLCMEHRISEATWLFMSMQKLGCRPDAITYGTLMKGLCQTGNINIALQLHQ 441

Query: 699 EMMHSEDR---ESKRGLV--DAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAV 746
           EM++   R   + K  L+    ++D L K   ++EA  ++E    + + PD +
Sbjct: 442 EMLNDTGRYGIKCKPTLISYSIIIDGLCKDRREDEARELFEEMKAQGIMPDVI 494



 Score =  119 bits (297), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 68/214 (31%), Positives = 118/214 (55%), Gaps = 8/214 (3%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           G + D  T++ ++ +L +  +    N+LL+ M++ GC PN VTY  L+      + ++EA
Sbjct: 704 GVQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQRGCIPNTVTYTTLVKGLCMNDRISEA 763

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQA------AGLSPDTFTY 468
             +F +MQ +GC PD VTY TL+    + G +  A++++KKM +          PD  +Y
Sbjct: 764 TQLFMKMQKLGCLPDVVTYGTLMKGLCQTGNIKTALELHKKMLSDTGQYGTNFKPDVISY 823

Query: 469 SVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQN 528
           S+II+ L K G    A +LF EM   G IPN+++Y  +I    ++   + A  L+ +M +
Sbjct: 824 SIIIDGLCKHGREDEARELFKEMKALGVIPNVISYTSLIHGFCRSGKLEDAKHLFNEMVD 883

Query: 529 AGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMR 562
            G + + VTYS+++      G +D  +A+F +M 
Sbjct: 884 QGVQLNAVTYSVMIHGFCKEGQID--KALFQKME 915



 Score = 99.0 bits (245), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 111/479 (23%), Positives = 179/479 (37%), Gaps = 88/479 (18%)

Query: 390 GCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVA 449
           G  P+  T+N LI+       +NE L     +   G  PD VTY                
Sbjct: 5   GLFPDSFTFNILINCLCNVKRVNEGLAAMAGIMRRGYIPDIVTY---------------- 48

Query: 450 MDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIAL 509
                      + PD  T S++I+ L K G +  A++L   M+ +GCI ++VTY+ +I  
Sbjct: 49  ----------SIRPDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKG 98

Query: 510 QAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYL------------------ 551
                    A  L+  MQ  G  PD +TY  +M+ L   G +                  
Sbjct: 99  LCMEHRISEATWLFMSMQKLGCRPDAITYGTLMKGLCQTGNINIALQLHQEMLNDTGRYG 158

Query: 552 -----------------------DEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRK 588
                                  DEA  +F EM+ +  +PD   Y  L+  +  +G   K
Sbjct: 159 IKCKPTLISYSIIIDGLCKDRREDEARELFKEMKAQGMMPDVISYTSLIHGFCHSGKWEK 218

Query: 589 AWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTY-TLLL 647
           A   +  ML  G++P+V T   L+  F + G++ +A  LL+ M++ G    + TY TL+ 
Sbjct: 219 AKCLFNEMLDVGIQPDVTTSGVLIDMFCKEGKVIEANELLEVMVHRGCILDIVTYSTLIK 278

Query: 648 SCCTEARSPYDMGFCHELMAVSGHP-AHMFLLSMPSPGPDGQ-NVRDHVGSFLEMMHSED 705
             C + R          +  +   P A  +   M      G+ N+  H+    EM++   
Sbjct: 279 GLCMKHRISEATQLFMSMKKLGCRPDAIAYGTLMKGLCQTGKINIALHLHQ--EMLNDTS 336

Query: 706 RESKRGL------VDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAVKEKGMSYWLINLH 759
           +   + +         ++D L K G   EA  + EV  Q+    D V    +   L   H
Sbjct: 337 QYGIKCIRPDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMEH 396

Query: 760 VMSDGTAVIALSRTLAWFRKQMLISGVGPSRIDIVTGWGRRSRVTGTSLVRQAVQELLH 818
            +S+ T          W    M   G  P  I   T      +    ++  Q  QE+L+
Sbjct: 397 RISEAT----------WLFMSMQKLGCRPDAITYGTLMKGLCQTGNINIALQLHQEMLN 445



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 32/103 (31%), Positives = 55/103 (53%), Gaps = 2/103 (1%)

Query: 356 FKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEAL 415
           FK D  +Y+ ++  L +  +     +L  +M   G  PNV++Y  LIH + R+  L +A 
Sbjct: 816 FKPDVISYSIIIDGLCKHGREDEARELFKEMKALGVIPNVISYTSLIHGFCRSGKLEDAK 875

Query: 416 DVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQA 458
            +F +M   G + + VTY  +I    K G +D A  +++KM+A
Sbjct: 876 HLFNEMVDQGVQLNAVTYSVMIHGFCKEGQIDKA--LFQKMEA 916


>gi|449438480|ref|XP_004137016.1| PREDICTED: pentatricopeptide repeat-containing protein At1g03560,
           mitochondrial-like [Cucumis sativus]
          Length = 651

 Score =  147 bits (370), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 88/300 (29%), Positives = 149/300 (49%), Gaps = 1/300 (0%)

Query: 349 WLR-RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGR 407
           W R ++ G     +TY  +V  L  +    +  K+ + M      P+ VTYN +I  Y +
Sbjct: 206 WRRMKENGIDPSLYTYNFLVNGLVNSMFIESAEKVFEVMDGGKIVPDTVTYNIMIKGYCK 265

Query: 408 ANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFT 467
           A  L +A++ F+ M++   +PD++TY TLI         D  + +Y +M+  GL     +
Sbjct: 266 AGKLQKAMEKFRDMEMKNVKPDKITYMTLIQACYSERDFDTCLSLYLEMEERGLEIPPHS 325

Query: 468 YSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQ 527
           YS++I  L K      A+ +F  M  +GC  N+  Y  +I   +K  + + A++L+  M+
Sbjct: 326 YSLVIGGLCKQRKCMEAYAVFETMNQKGCRANVAIYTALIDSYSKNGSMEEAMRLFERMK 385

Query: 528 NAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVR 587
           N GFEPD VTYS+++  L   G LD+   +F   R K    +   Y  L+D  GKAG + 
Sbjct: 386 NEGFEPDAVTYSVLVNGLCKSGRLDDGMELFDFCRNKGVAINAMFYASLIDGLGKAGRIE 445

Query: 588 KAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
            A   +E M + G   +    N+++ A  + G++  A  L   M   G   ++ T+T+L+
Sbjct: 446 DAENLFEEMSEKGCARDSYCYNAIIDALAKHGKIDQALALFGRMEEEGCDQTVYTFTILI 505



 Score =  136 bits (343), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 101/414 (24%), Positives = 177/414 (42%)

Query: 342 VALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRL 401
           VA+ FF W  +Q  + H    + +++ +L  +     I  +  ++   G        N L
Sbjct: 130 VAVRFFFWAGKQKKYVHKIECHVSLIELLTFSADLVKIRLVFFELKDRGLLMTESAANSL 189

Query: 402 IHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGL 461
           I S+G    + E L V+++M+  G +P   TY  L++    + F++ A  +++ M    +
Sbjct: 190 IKSFGNLGLVEELLWVWRRMKENGIDPSLYTYNFLVNGLVNSMFIESAEKVFEVMDGGKI 249

Query: 462 SPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALK 521
            PDT TY+++I    KAG LQ A + F +M  +   P+ +TY  +I      R++ + L 
Sbjct: 250 VPDTVTYNIMIKGYCKAGKLQKAMEKFRDMEMKNVKPDKITYMTLIQACYSERDFDTCLS 309

Query: 522 LYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWG 581
           LY +M+  G E    +YS+V+  L       EA AVF  M +K    +  +Y  L+D + 
Sbjct: 310 LYLEMEERGLEIPPHSYSLVIGGLCKQRKCMEAYAVFETMNQKGCRANVAIYTALIDSYS 369

Query: 582 KAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQ 641
           K G++ +A   +E M   G  P+  T + L++   + G+L D   L     N G+  +  
Sbjct: 370 KNGSMEEAMRLFERMKNEGFEPDAVTYSVLVNGLCKSGRLDDGMELFDFCRNKGVAINAM 429

Query: 642 TYTLLLSCCTEARSPYDMGFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMM 701
            Y  L+    +A    D     E M+  G     +  +            D   +    M
Sbjct: 430 FYASLIDGLGKAGRIEDAENLFEEMSEKGCARDSYCYNAIIDALAKHGKIDQALALFGRM 489

Query: 702 HSEDRESKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAVKEKGMSYWL 755
             E  +        ++D L K    EEA   W+    K + P     + ++  L
Sbjct: 490 EEEGCDQTVYTFTILIDGLFKEHKNEEAIKFWDKMIDKGITPTVASFRALAIGL 543



 Score =  122 bits (306), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 81/300 (27%), Positives = 141/300 (47%), Gaps = 4/300 (1%)

Query: 357 KHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALD 416
           K D+ TY T++      R F     L  +M   G +    +Y+ +I    +     EA  
Sbjct: 285 KPDKITYMTLIQACYSERDFDTCLSLYLEMEERGLEIPPHSYSLVIGGLCKQRKCMEAYA 344

Query: 417 VFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLG 476
           VF+ M   GC  +   Y  LID ++K G ++ AM ++++M+  G  PD  TYSV++N L 
Sbjct: 345 VFETMNQKGCRANVAIYTALIDSYSKNGSMEEAMRLFERMKNEGFEPDAVTYSVLVNGLC 404

Query: 477 KAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKV 536
           K+G L    +LF    N+G   N + Y  +I    KA   + A  L+ +M   G   D  
Sbjct: 405 KSGRLDDGMELFDFCRNKGVAINAMFYASLIDGLGKAGRIEDAENLFEEMSEKGCARDSY 464

Query: 537 TYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVY--GLLVDLWGKAGNVRKAWEWYE 594
            Y+ +++ L   G +D+A A+F  M  +    D+ VY   +L+D   K     +A ++++
Sbjct: 465 CYNAIIDALAKHGKIDQALALFGRMEEEGC--DQTVYTFTILIDGLFKEHKNEEAIKFWD 522

Query: 595 AMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEAR 654
            M+  G+ P V +  +L       G+++ A  +L  +  +G+ P      ++ + C   R
Sbjct: 523 KMIDKGITPTVASFRALAIGLCLCGKVARACKILDDLAPMGIIPETAFEDMINTLCKAQR 582



 Score =  119 bits (299), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 79/301 (26%), Positives = 149/301 (49%), Gaps = 1/301 (0%)

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
           + G +   H+Y+ ++G L + R+      + + M + GC+ NV  Y  LI SY +   + 
Sbjct: 316 ERGLEIPPHSYSLVIGGLCKQRKCMEAYAVFETMNQKGCRANVAIYTALIDSYSKNGSME 375

Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
           EA+ +F++M+  G EPD VTY  L++   K+G LD  M+++   +  G++ +   Y+ +I
Sbjct: 376 EAMRLFERMKNEGFEPDAVTYSVLVNGLCKSGRLDDGMELFDFCRNKGVAINAMFYASLI 435

Query: 473 NCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFE 532
           + LGKAG ++ A  LF EM  +GC  +   YN +I   AK      AL L+  M+  G +
Sbjct: 436 DGLGKAGRIEDAENLFEEMSEKGCARDSYCYNAIIDALAKHGKIDQALALFGRMEEEGCD 495

Query: 533 PDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEW 592
               T++I+++ L      +EA   + +M  K   P    +  L       G V +A + 
Sbjct: 496 QTVYTFTILIDGLFKEHKNEEAIKFWDKMIDKGITPTVASFRALAIGLCLCGKVARACKI 555

Query: 593 YEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTE 652
            + +   G+ P       +++   +  ++ +A  L  G+++ G +   +  T+L++   +
Sbjct: 556 LDDLAPMGIIPETAF-EDMINTLCKAQRIKEACKLADGIVDRGREIPGRIRTVLINALRK 614

Query: 653 A 653
           A
Sbjct: 615 A 615



 Score = 79.7 bits (195), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 50/210 (23%), Positives = 101/210 (48%), Gaps = 7/210 (3%)

Query: 325 MDAYQANQVLKQLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLD 384
           +D+Y  N  +++      A+  F  ++ + GF+ D  TY+ +V  L ++ +     +L D
Sbjct: 365 IDSYSKNGSMEE------AMRLFERMKNE-GFEPDAVTYSVLVNGLCKSGRLDDGMELFD 417

Query: 385 QMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAG 444
                G   N + Y  LI   G+A  + +A ++F++M   GC  D   Y  +ID  AK G
Sbjct: 418 FCRNKGVAINAMFYASLIDGLGKAGRIEDAENLFEEMSEKGCARDSYCYNAIIDALAKHG 477

Query: 445 FLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYN 504
            +D A+ ++ +M+  G     +T++++I+ L K    + A + + +M+++G  P + ++ 
Sbjct: 478 KIDQALALFGRMEEEGCDQTVYTFTILIDGLFKEHKNEEAIKFWDKMIDKGITPTVASFR 537

Query: 505 IMIALQAKARNYQSALKLYRDMQNAGFEPD 534
            +            A K+  D+   G  P+
Sbjct: 538 ALAIGLCLCGKVARACKILDDLAPMGIIPE 567



 Score = 65.9 bits (159), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 70/323 (21%), Positives = 123/323 (38%), Gaps = 39/323 (12%)

Query: 471 IINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAG 530
           +I  L  +  L     +F E+ ++G +      N +I         +  L ++R M+  G
Sbjct: 154 LIELLTFSADLVKIRLVFFELKDRGLLMTESAANSLIKSFGNLGLVEELLWVWRRMKENG 213

Query: 531 FEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAW 590
            +P   TY+ ++  L +  +++ AE VF  M     VPD   Y +++  + KAG ++KA 
Sbjct: 214 IDPSLYTYNFLVNGLVNSMFIESAEKVFEVMDGGKIVPDTVTYNIMIKGYCKAGKLQKAM 273

Query: 591 EWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCC 650
           E +  M    ++P+  T  +L+ A            L   M   GL+    +Y+L++   
Sbjct: 274 EKFRDMEMKNVKPDKITYMTLIQACYSERDFDTCLSLYLEMEERGLEIPPHSYSLVIGGL 333

Query: 651 TEARSPYDMGFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRESKR 710
            + R       C E  AV                              E M+ +   +  
Sbjct: 334 CKQRK------CMEAYAV-----------------------------FETMNQKGCRANV 358

Query: 711 GLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAVKEKGMSYWLINLHVMSDGTAVIAL 770
            +  A++D   K+G  EEA  ++E    +   PDAV    +   L     + DG  +   
Sbjct: 359 AIYTALIDSYSKNGSMEEAMRLFERMKNEGFEPDAVTYSVLVNGLCKSGRLDDGMELFDF 418

Query: 771 SRTLAWFRKQM----LISGVGPS 789
            R        M    LI G+G +
Sbjct: 419 CRNKGVAINAMFYASLIDGLGKA 441


>gi|326513552|dbj|BAJ87795.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 538

 Score =  147 bits (370), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 92/347 (26%), Positives = 168/347 (48%), Gaps = 8/347 (2%)

Query: 301 VSRILRQWKWGPLAEEALGNTNYSMDAYQANQVLKQLQDHTVALGFFNWLRRQAGFKHDE 360
           V+ +L++ + G + E  +G     +D       L    D +     F+ ++R+     D 
Sbjct: 187 VAEVLKEMESGGV-EPTVGTYTILVDG------LSTAGDISKVESVFDEIKRK-NVAGDV 238

Query: 361 HTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQ 420
           + Y+ ++    RA      +++ D+ V +G +PN  TY  LI+ + +   +  A  +   
Sbjct: 239 YFYSAVINAYCRAGNVRRASEVFDECVGNGIEPNERTYGALINGFCKIGQIEAAEMLLTD 298

Query: 421 MQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGH 480
           MQ+ G   +++ + T+ID + + G +D A+++   M+  G+  D +TY+ +   L +   
Sbjct: 299 MQLRGVGHNQIIFNTMIDGYCRHGMVDKALEIKAVMERMGIQLDVYTYNTLACGLCRVNR 358

Query: 481 LQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSI 540
           ++ A +L   M   G   N V+Y  +I++ +K  +   A +L+RDM+  G  P  VTY++
Sbjct: 359 MEDAKKLLHIMTENGVESNYVSYTTLISIHSKEGDMVEARRLFRDMEGKGSRPSVVTYNV 418

Query: 541 VMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAG 600
           +++     G + EAE    EM +K  VPD   Y  LV      G V  A   +E M Q G
Sbjct: 419 MIDGYIKSGSIREAERFKKEMEKKGLVPDVYTYAALVHGHCVNGKVDVALRLFEEMKQRG 478

Query: 601 LRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
            +PNV    +L+S   + G+  +A+     ML  GL P    Y++L+
Sbjct: 479 AKPNVVAYTALISGLAKEGRSEEAFQFYDNMLAAGLTPDDTLYSMLV 525



 Score =  121 bits (303), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 79/271 (29%), Positives = 136/271 (50%), Gaps = 5/271 (1%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           G + +E TY  ++    +  Q  A   LL  M   G   N + +N +I  Y R   +++A
Sbjct: 268 GIEPNERTYGALINGFCKIGQIEAAEMLLTDMQLRGVGHNQIIFNTMIDGYCRHGMVDKA 327

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
           L++   M+ +G + D  TY TL     +   ++ A  +   M   G+  +  +Y+ +I+ 
Sbjct: 328 LEIKAVMERMGIQLDVYTYNTLACGLCRVNRMEDAKKLLHIMTENGVESNYVSYTTLISI 387

Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPD 534
             K G +  A +LF +M  +G  P++VTYN+MI    K+ + + A +  ++M+  G  PD
Sbjct: 388 HSKEGDMVEARRLFRDMEGKGSRPSVVTYNVMIDGYIKSGSIREAERFKKEMEKKGLVPD 447

Query: 535 KVTYSIVMEVLGHC--GYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEW 592
             TY+ +  V GHC  G +D A  +F EM+++   P+   Y  L+    K G   +A+++
Sbjct: 448 VYTYAAL--VHGHCVNGKVDVALRLFEEMKQRGAKPNVVAYTALISGLAKEGRSEEAFQF 505

Query: 593 YEAMLQAGLRPNVPTCNSLLSAFLRVGQLSD 623
           Y+ ML AGL P+  T  S+L   L   +  D
Sbjct: 506 YDNMLAAGLTPD-DTLYSMLVGSLHTDKRKD 535



 Score =  120 bits (301), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 83/312 (26%), Positives = 147/312 (47%), Gaps = 1/312 (0%)

Query: 362 TYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQM 421
           TYT +V  L  A     +  + D++ R     +V  Y+ +I++Y RA  +  A +VF + 
Sbjct: 205 TYTILVDGLSTAGDISKVESVFDEIKRKNVAGDVYFYSAVINAYCRAGNVRRASEVFDEC 264

Query: 422 QVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHL 481
              G EP+  TY  LI+   K G ++ A  +   MQ  G+  +   ++ +I+   + G +
Sbjct: 265 VGNGIEPNERTYGALINGFCKIGQIEAAEMLLTDMQLRGVGHNQIIFNTMIDGYCRHGMV 324

Query: 482 QAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIV 541
             A ++   M   G   ++ TYN +     +    + A KL   M   G E + V+Y+ +
Sbjct: 325 DKALEIKAVMERMGIQLDVYTYNTLACGLCRVNRMEDAKKLLHIMTENGVESNYVSYTTL 384

Query: 542 MEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGL 601
           + +    G + EA  +F +M  K   P    Y +++D + K+G++R+A  + + M + GL
Sbjct: 385 ISIHSKEGDMVEARRLFRDMEGKGSRPSVVTYNVMIDGYIKSGSIREAERFKKEMEKKGL 444

Query: 602 RPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS-CCTEARSPYDMG 660
            P+V T  +L+      G++  A  L + M   G KP++  YT L+S    E RS     
Sbjct: 445 VPDVYTYAALVHGHCVNGKVDVALRLFEEMKQRGAKPNVVAYTALISGLAKEGRSEEAFQ 504

Query: 661 FCHELMAVSGHP 672
           F   ++A    P
Sbjct: 505 FYDNMLAAGLTP 516



 Score =  112 bits (280), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 74/269 (27%), Positives = 132/269 (49%), Gaps = 4/269 (1%)

Query: 381 KLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIH 440
           +LLD+M R G + N   YN L+ +Y R        +V K+M+  G EP   TY  L+D  
Sbjct: 154 RLLDEMPRHGVKLNACCYNPLLDTYTRQKNDARVAEVLKEMESGGVEPTVGTYTILVDGL 213

Query: 441 AKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNL 500
           + AG +     ++ +++   ++ D + YS +IN   +AG+++ A ++F E V  G  PN 
Sbjct: 214 STAGDISKVESVFDEIKRKNVAGDVYFYSAVINAYCRAGNVRRASEVFDECVGNGIEPNE 273

Query: 501 VTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHC--GYLDEAEAVF 558
            TY  +I    K    ++A  L  DMQ  G   +++ ++ +++  G+C  G +D+A  + 
Sbjct: 274 RTYGALINGFCKIGQIEAAEMLLTDMQLRGVGHNQIIFNTMID--GYCRHGMVDKALEIK 331

Query: 559 AEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRV 618
           A M R     D   Y  L     +   +  A +    M + G+  N  +  +L+S   + 
Sbjct: 332 AVMERMGIQLDVYTYNTLACGLCRVNRMEDAKKLLHIMTENGVESNYVSYTTLISIHSKE 391

Query: 619 GQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
           G + +A  L + M   G +PS+ TY +++
Sbjct: 392 GDMVEARRLFRDMEGKGSRPSVVTYNVMI 420



 Score =  100 bits (248), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 51/166 (30%), Positives = 92/166 (55%)

Query: 466 FTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRD 525
            + SV+++   KAG +  A +L  EM   G   N   YN ++    + +N     ++ ++
Sbjct: 134 LSASVVVDGFCKAGRMDDARRLLDEMPRHGVKLNACCYNPLLDTYTRQKNDARVAEVLKE 193

Query: 526 MQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGN 585
           M++ G EP   TY+I+++ L   G + + E+VF E++RKN   D   Y  +++ + +AGN
Sbjct: 194 MESGGVEPTVGTYTILVDGLSTAGDISKVESVFDEIKRKNVAGDVYFYSAVINAYCRAGN 253

Query: 586 VRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGM 631
           VR+A E ++  +  G+ PN  T  +L++ F ++GQ+  A  LL  M
Sbjct: 254 VRRASEVFDECVGNGIEPNERTYGALINGFCKIGQIEAAEMLLTDM 299


>gi|255660820|gb|ACU25579.1| pentatricopeptide repeat-containing protein [Mulguraea
           asparagoides]
          Length = 418

 Score =  147 bits (370), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 86/299 (28%), Positives = 159/299 (53%)

Query: 350 LRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRAN 409
           L ++  F+    T   ++  L + + F  +    ++ +  G   ++  +N L+H++ +  
Sbjct: 91  LTKEHKFRVPFDTCRKVIEHLMKLKYFKLVWGFYEESLECGYPASLYFFNILMHNFCKEG 150

Query: 410 YLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYS 469
            +  A  VF  +   G  P  V++ TL++ + K G LD    +   MQA+G+ PD +T+S
Sbjct: 151 EIRLAQSVFDSITKWGLRPSVVSFNTLMNGYIKIGDLDEGFRLKSVMQASGVQPDVYTHS 210

Query: 470 VIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNA 529
           V+IN L K   +  A++LF EM+B G +PN VT+  +I    K      A+++YR M + 
Sbjct: 211 VLINGLCKESKMDDANELFDEMLBNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYRQMLSQ 270

Query: 530 GFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKA 589
              PD +TY+ ++  L   G L +   +  EM  K   PD+  Y  L+D   K G++  A
Sbjct: 271 SLLPDLITYNTLIYGLCKKGDLKQXXDLIDEMSMKGLKPDKITYTTLIDGNCKEGDLETA 330

Query: 590 WEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
           +E+ + M++  +R +     +L+S   + G+  DA  +L+ ML++GLKP + TYT++++
Sbjct: 331 FEYRKRMIKENIRLDDXAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIIN 389



 Score =  120 bits (302), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 77/316 (24%), Positives = 154/316 (48%), Gaps = 10/316 (3%)

Query: 335 KQLQDHTVALGFFNWL------RRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVR 388
           +++ +H + L +F  +        + G+    + +  ++    +  +      + D + +
Sbjct: 105 RKVIEHLMKLKYFKLVWGFYEESLECGYPASLYFFNILMHNFCKEGEIRLAQSVFDSITK 164

Query: 389 DGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDV 448
            G +P+VV++N L++ Y +   L+E   +   MQ  G +PD  T+  LI+   K   +D 
Sbjct: 165 WGLRPSVVSFNTLMNGYIKIGDLDEGFRLKSVMQASGVQPDVYTHSVLINGLCKESKMDD 224

Query: 449 AMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIA 508
           A +++ +M   GL P+  T++ +I+   K G +  A +++ +M++Q  +P+L+TYN +I 
Sbjct: 225 ANELFDEMLBNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYRQMLSQSLLPDLITYNTLIY 284

Query: 509 LQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHC--GYLDEAEAVFAEMRRKNW 566
              K  + +    L  +M   G +PDK+TY+ +++  G+C  G L+ A      M ++N 
Sbjct: 285 GLCKKGDLKQXXDLIDEMSMKGLKPDKITYTTLID--GNCKEGDLETAFEYRKRMIKENI 342

Query: 567 VPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYH 626
             D+  Y  L+    + G    A +    ML  GL+P + T   +++ F + G +     
Sbjct: 343 RLDDXAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSK 402

Query: 627 LLQGMLNLGLKPSLQT 642
           LL+ M   G  P+  T
Sbjct: 403 LLKEMQRXGYXPNXVT 418


>gi|297744958|emb|CBI38550.3| unnamed protein product [Vitis vinifera]
          Length = 795

 Score =  147 bits (370), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 84/301 (27%), Positives = 153/301 (50%)

Query: 347 FNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYG 406
           F+   RQ G   D  T+ TM+    +    G   KLL++M   G +PN +T N L+    
Sbjct: 423 FHTGMRQLGLAPDSATFNTMINAYCKEGNLGNALKLLNEMKSYGLKPNSITCNILVQRLC 482

Query: 407 RANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTF 466
            A  + + +D+   M V+G  P   T+  ++D  +K+   DV + M+ ++   G+  D  
Sbjct: 483 AAGEIEKTMDLLNDMLVMGFHPTPTTHKAVLDASSKSRRADVILHMHDQLVGMGVKLDLS 542

Query: 467 TYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDM 526
           TY+ +I+   + G ++ A  +F +M+ +G + +++TYN +I     + + + A  ++  M
Sbjct: 543 TYNTLISTFCRLGMIRRATLVFKDMMGKGILADIITYNALIHGYCISSHLKKAFAVHSQM 602

Query: 527 QNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNV 586
              G  P+  TY+I++  L     + EA  +  +M+ +  VP+   Y +LV   GK GN+
Sbjct: 603 LTEGVSPNVETYNILLGGLSAARLIKEAAGLVNQMKERGLVPNATTYDILVSGHGKIGNM 662

Query: 587 RKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLL 646
           ++  + Y  M+  G  P   T N L+S F +  ++S A  L+Q M   G+ P+  TY +L
Sbjct: 663 KECVKLYCEMITKGFVPKTRTYNVLISCFAKGKKMSQAKELMQEMQVRGIPPNSSTYDIL 722

Query: 647 L 647
           +
Sbjct: 723 I 723



 Score =  144 bits (362), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 85/285 (29%), Positives = 150/285 (52%), Gaps = 8/285 (2%)

Query: 375 QFGAINK---LLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRV 431
           + G +NK   LL +M      PNV+ Y+ ++  Y +   LNEA+DV ++M      P+  
Sbjct: 239 KLGDVNKGELLLQEMEEKHIFPNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVF 298

Query: 432 TYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEM 491
            Y TLID + KA    +A+D++K+M++ GL  + F     +N L ++G ++ A +LF +M
Sbjct: 299 VYGTLIDGYFKADQRGIALDLFKEMKSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDM 358

Query: 492 VNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDM--QNAGFEPDKVTYSIVMEVLGHCG 549
           +++G +P+ V Y  M+    KA     A  + ++M  +++GF  D V Y++++  L   G
Sbjct: 359 MSRGLLPDRVNYTSMMDGFFKAGKESDAFNIAQEMTEKSSGF--DVVAYNVLINGLFKLG 416

Query: 550 YLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCN 609
              E+E+    MR+    PD   +  +++ + K GN+  A +    M   GL+PN  TCN
Sbjct: 417 KY-ESESFHTGMRQLGLAPDSATFNTMINAYCKEGNLGNALKLLNEMKSYGLKPNSITCN 475

Query: 610 SLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEAR 654
            L+      G++     LL  ML +G  P+  T+  +L   +++R
Sbjct: 476 ILVQRLCAAGEIEKTMDLLNDMLVMGFHPTPTTHKAVLDASSKSR 520



 Score =  142 bits (359), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 102/374 (27%), Positives = 172/374 (45%), Gaps = 41/374 (10%)

Query: 381 KLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIH 440
           +LL+ M  +G  P++VTYN L++ + +   L  A  +  ++ +V  EP+ +TY TLID +
Sbjct: 38  ELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFTAKKLMGEISLVNLEPNVITYTTLIDAY 97

Query: 441 AKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNL 500
            K+  L+ A+ MY +M    L PD  TY+ I+N L K+G ++ A  +F EM   G +PN 
Sbjct: 98  CKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGLCKSGKVEEAKSVFREMEEVGVVPNR 157

Query: 501 VTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAE 560
            +Y  +I    K  N   A  L   M   G   D V Y+ +M+ L   G  + AE +F  
Sbjct: 158 FSYATLIDSLFKEGNVAEAFVLQGRMVVRGIGFDVVVYTALMDGLFKAGMANNAEDMFQV 217

Query: 561 MRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQ 620
           +  ++ VP+   Y  L+D   K G+V K     + M +  + PNV   +S++  + + G 
Sbjct: 218 LLEESLVPNCVTYSALIDGHCKLGDVNKGELLLQEMEEKHIFPNVIVYSSIVDGYTKKGL 277

Query: 621 LSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGFCHELMAVSGHPAHMFLLSM 680
           L++A  +++ M+   + P++  Y  L+                                 
Sbjct: 278 LNEAMDVMRKMVQRNILPNVFVYGTLI--------------------------------- 304

Query: 681 PSPGPDGQNVRDHVGSFLEM---MHSEDRESKRGLVDAVVDFLHKSGLKEEAGSVWEVAA 737
                DG    D  G  L++   M S   E    ++D+ V+ L +SG  EEA  +++   
Sbjct: 305 -----DGYFKADQRGIALDLFKEMKSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDMM 359

Query: 738 QKNVYPDAVKEKGM 751
            + + PD V    M
Sbjct: 360 SRGLLPDRVNYTSM 373



 Score =  133 bits (334), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 81/286 (28%), Positives = 146/286 (51%)

Query: 362 TYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQM 421
           TYTT++    +++       + D+M      P+VVTY  +++   ++  + EA  VF++M
Sbjct: 89  TYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGLCKSGKVEEAKSVFREM 148

Query: 422 QVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHL 481
           + VG  P+R +Y TLID   K G +  A  +  +M   G+  D   Y+ +++ L KAG  
Sbjct: 149 EEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIGFDVVVYTALMDGLFKAGMA 208

Query: 482 QAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIV 541
             A  +F  ++ +  +PN VTY+ +I    K  +      L ++M+     P+ + YS +
Sbjct: 209 NNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLLQEMEEKHIFPNVIVYSSI 268

Query: 542 MEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGL 601
           ++     G L+EA  V  +M ++N +P+  VYG L+D + KA     A + ++ M   GL
Sbjct: 269 VDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFKADQRGIALDLFKEMKSRGL 328

Query: 602 RPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
             N    +S ++   R G++ +A  L + M++ GL P    YT ++
Sbjct: 329 EENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDRVNYTSMM 374



 Score =  125 bits (315), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 79/281 (28%), Positives = 147/281 (52%), Gaps = 4/281 (1%)

Query: 359 DEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVF 418
           D  TY T++    +        KL+ ++     +PNV+TY  LI +Y ++  L +AL ++
Sbjct: 51  DIVTYNTLMNGFCKIGDLFTAKKLMGEISLVNLEPNVITYTTLIDAYCKSQCLEDALYMY 110

Query: 419 KQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKA 478
            +M V    PD VTY  +++   K+G ++ A  ++++M+  G+ P+ F+Y+ +I+ L K 
Sbjct: 111 DEMTVKSLVPDVVTYTCIMNGLCKSGKVEEAKSVFREMEEVGVVPNRFSYATLIDSLFKE 170

Query: 479 GHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTY 538
           G++  A  L   MV +G   ++V Y  ++    KA    +A  +++ +      P+ VTY
Sbjct: 171 GNVAEAFVLQGRMVVRGIGFDVVVYTALMDGLFKAGMANNAEDMFQVLLEESLVPNCVTY 230

Query: 539 SIVMEVLGHC--GYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAM 596
           S +++  GHC  G +++ E +  EM  K+  P+  VY  +VD + K G + +A +    M
Sbjct: 231 SALID--GHCKLGDVNKGELLLQEMEEKHIFPNVIVYSSIVDGYTKKGLLNEAMDVMRKM 288

Query: 597 LQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLK 637
           +Q  + PNV    +L+  + +  Q   A  L + M + GL+
Sbjct: 289 VQRNILPNVFVYGTLIDGYFKADQRGIALDLFKEMKSRGLE 329



 Score =  120 bits (301), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 88/357 (24%), Positives = 155/357 (43%), Gaps = 35/357 (9%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
            + G   +  +Y T++  L +         L  +MV  G   +VV Y  L+    +A   
Sbjct: 149 EEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIGFDVVVYTALMDGLFKAGMA 208

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
           N A D+F+ +      P+ VTY  LID H K G ++    + ++M+   + P+   YS I
Sbjct: 209 NNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLLQEMEEKHIFPNVIVYSSI 268

Query: 472 INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF 531
           ++   K G L  A  +  +MV +  +PN+  Y  +I    KA     AL L+++M++ G 
Sbjct: 269 VDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFKADQRGIALDLFKEMKSRGL 328

Query: 532 EPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAW- 590
           E +       +  L   G ++EA+ +F +M  +  +PD   Y  ++D + KAG    A+ 
Sbjct: 329 EENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDRVNYTSMMDGFFKAGKESDAFN 388

Query: 591 ---------------------------------EWYEAMLQAGLRPNVPTCNSLLSAFLR 617
                                             ++  M Q GL P+  T N++++A+ +
Sbjct: 389 IAQEMTEKSSGFDVVAYNVLINGLFKLGKYESESFHTGMRQLGLAPDSATFNTMINAYCK 448

Query: 618 VGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS-CCTEARSPYDMGFCHELMAVSGHPA 673
            G L +A  LL  M + GLKP+  T  +L+   C        M   ++++ +  HP 
Sbjct: 449 EGNLGNALKLLNEMKSYGLKPNSITCNILVQRLCAAGEIEKTMDLLNDMLVMGFHPT 505



 Score =  111 bits (278), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 79/296 (26%), Positives = 141/296 (47%), Gaps = 5/296 (1%)

Query: 355 GFKHDEHTYTTMV-GILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHS-YGRANYLN 412
           G   D   YT+M+ G     ++  A N +  +M       +VV YN LI+  +    Y +
Sbjct: 362 GLLPDRVNYTSMMDGFFKAGKESDAFN-IAQEMTEKSSGFDVVAYNVLINGLFKLGKYES 420

Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
           E+      M+ +G  PD  T+ T+I+ + K G L  A+ +  +M++ GL P++ T ++++
Sbjct: 421 ESFHT--GMRQLGLAPDSATFNTMINAYCKEGNLGNALKLLNEMKSYGLKPNSITCNILV 478

Query: 473 NCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFE 532
             L  AG ++    L  +M+  G  P   T+  ++   +K+R     L ++  +   G +
Sbjct: 479 QRLCAAGEIEKTMDLLNDMLVMGFHPTPTTHKAVLDASSKSRRADVILHMHDQLVGMGVK 538

Query: 533 PDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEW 592
            D  TY+ ++      G +  A  VF +M  K  + D   Y  L+  +  + +++KA+  
Sbjct: 539 LDLSTYNTLISTFCRLGMIRRATLVFKDMMGKGILADIITYNALIHGYCISSHLKKAFAV 598

Query: 593 YEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
           +  ML  G+ PNV T N LL        + +A  L+  M   GL P+  TY +L+S
Sbjct: 599 HSQMLTEGVSPNVETYNILLGGLSAARLIKEAAGLVNQMKERGLVPNATTYDILVS 654



 Score =  109 bits (273), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 71/285 (24%), Positives = 133/285 (46%), Gaps = 4/285 (1%)

Query: 390 GCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVA 449
           G  P+  T+N +I++Y +   L  AL +  +M+  G +P+ +T   L+     AG ++  
Sbjct: 431 GLAPDSATFNTMINAYCKEGNLGNALKLLNEMKSYGLKPNSITCNILVQRLCAAGEIEKT 490

Query: 450 MDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIAL 509
           MD+   M   G  P   T+  +++   K+        +  ++V  G   +L TYN +I+ 
Sbjct: 491 MDLLNDMLVMGFHPTPTTHKAVLDASSKSRRADVILHMHDQLVGMGVKLDLSTYNTLIST 550

Query: 510 QAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHC--GYLDEAEAVFAEMRRKNWV 567
             +    + A  +++DM   G   D +TY+ ++   G+C   +L +A AV ++M  +   
Sbjct: 551 FCRLGMIRRATLVFKDMMGKGILADIITYNALIH--GYCISSHLKKAFAVHSQMLTEGVS 608

Query: 568 PDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHL 627
           P+   Y +L+     A  +++A      M + GL PN  T + L+S   ++G + +   L
Sbjct: 609 PNVETYNILLGGLSAARLIKEAAGLVNQMKERGLVPNATTYDILVSGHGKIGNMKECVKL 668

Query: 628 LQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGFCHELMAVSGHP 672
              M+  G  P  +TY +L+SC  + +         + M V G P
Sbjct: 669 YCEMITKGFVPKTRTYNVLISCFAKGKKMSQAKELMQEMQVRGIP 713



 Score =  108 bits (271), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 77/313 (24%), Positives = 146/313 (46%), Gaps = 2/313 (0%)

Query: 342 VALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRL 401
           +AL  F  ++ + G + +     + V  L R+ +    ++L   M+  G  P+ V Y  +
Sbjct: 315 IALDLFKEMKSR-GLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDRVNYTSM 373

Query: 402 IHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGL 461
           +  + +A   ++A ++ ++M       D V Y  LI+   K G  + +   +  M+  GL
Sbjct: 374 MDGFFKAGKESDAFNIAQEMTEKSSGFDVVAYNVLINGLFKLGKYE-SESFHTGMRQLGL 432

Query: 462 SPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALK 521
           +PD+ T++ +IN   K G+L  A +L  EM + G  PN +T NI++     A   +  + 
Sbjct: 433 APDSATFNTMINAYCKEGNLGNALKLLNEMKSYGLKPNSITCNILVQRLCAAGEIEKTMD 492

Query: 522 LYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWG 581
           L  DM   GF P   T+  V++        D    +  ++       D   Y  L+  + 
Sbjct: 493 LLNDMLVMGFHPTPTTHKAVLDASSKSRRADVILHMHDQLVGMGVKLDLSTYNTLISTFC 552

Query: 582 KAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQ 641
           + G +R+A   ++ M+  G+  ++ T N+L+  +     L  A+ +   ML  G+ P+++
Sbjct: 553 RLGMIRRATLVFKDMMGKGILADIITYNALIHGYCISSHLKKAFAVHSQMLTEGVSPNVE 612

Query: 642 TYTLLLSCCTEAR 654
           TY +LL   + AR
Sbjct: 613 TYNILLGGLSAAR 625


>gi|297853270|ref|XP_002894516.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297340358|gb|EFH70775.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 477

 Score =  147 bits (370), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 94/344 (27%), Positives = 166/344 (48%), Gaps = 12/344 (3%)

Query: 342 VALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRL 401
           +A  FF W   Q  F+H  + Y  ++ I     ++ A+ +L+D+M++DG      T+N L
Sbjct: 134 LAYKFFVWFGGQENFRHTANCYHLLMKIFAECGEYKAMCRLIDEMIKDGYPTTACTFNLL 193

Query: 402 IHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMD--MYKKMQAA 459
           I + G A    + ++ F + +     P + +Y  ++  H+  G     +   +Y++M   
Sbjct: 194 ICTCGEAGLARDVVEQFIKSKTFNYRPYKHSYNAIL--HSLLGVKQYKLIDWVYEQMLED 251

Query: 460 GLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSA 519
           G SPD  TY++++    + G     ++L  EMV  G  P+L TYNI++   A      +A
Sbjct: 252 GFSPDVLTYNIVMFANFRLGKTDRLYRLLDEMVKDGFSPDLYTYNILLHHLATGNKPLAA 311

Query: 520 LKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDL 579
           L L   M+  G EP  + ++ +++ L   G L+  +    EM +    PD   Y +++  
Sbjct: 312 LNLLTHMREVGVEPGVIHFTTLVDGLSRAGKLEACKYFMDEMVKVGCTPDVVCYTVMITG 371

Query: 580 WGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPS 639
           +   G + KA E ++ M + G  PNV T NS++  F   G+  +A  LL+ M + G  P+
Sbjct: 372 YISGGELEKAEEMFKEMTEKGQLPNVFTYNSMIRGFCMAGKFKEACSLLKEMESRGCNPN 431

Query: 640 LQTYTLLLSCCTEARSPYDMGFCHEL---MAVSGHPAHMFLLSM 680
              Y+ L++     R+   +   HE+   M   GH  H  L+SM
Sbjct: 432 FVVYSTLVN---NLRNAGKVLEAHEIVKDMVEKGHYVH--LISM 470



 Score = 92.4 bits (228), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 58/182 (31%), Positives = 93/182 (51%), Gaps = 2/182 (1%)

Query: 323 YSMDAYQANQVLKQLQDHTVALGFFNWLR--RQAGFKHDEHTYTTMVGILGRARQFGAIN 380
           +S D Y  N +L  L      L   N L   R+ G +     +TT+V  L RA +  A  
Sbjct: 288 FSPDLYTYNILLHHLATGNKPLAALNLLTHMREVGVEPGVIHFTTLVDGLSRAGKLEACK 347

Query: 381 KLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIH 440
             +D+MV+ GC P+VV Y  +I  Y     L +A ++FK+M   G  P+  TY ++I   
Sbjct: 348 YFMDEMVKVGCTPDVVCYTVMITGYISGGELEKAEEMFKEMTEKGQLPNVFTYNSMIRGF 407

Query: 441 AKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNL 500
             AG    A  + K+M++ G +P+   YS ++N L  AG +  AH++  +MV +G   +L
Sbjct: 408 CMAGKFKEACSLLKEMESRGCNPNFVVYSTLVNNLRNAGKVLEAHEIVKDMVEKGHYVHL 467

Query: 501 VT 502
           ++
Sbjct: 468 IS 469


>gi|225454795|ref|XP_002274101.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g27270-like [Vitis vinifera]
          Length = 1071

 Score =  147 bits (370), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 94/359 (26%), Positives = 171/359 (47%), Gaps = 4/359 (1%)

Query: 295 GNVVESVSRILRQWKWGPLA----EEALGNTNYSMDAYQANQVLKQLQDHTVALGFFNWL 350
           G  V +  RI+R     P       E +G+    +   +   VLK+ +    A  FF W+
Sbjct: 123 GKHVVAAIRIVRSLAARPDGSYNMREVMGSFVAKLSFREMCVVLKEQRGWRQARDFFGWM 182

Query: 351 RRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANY 410
           + Q  ++     YT ++ + G+  +     +   +M+  GC+P+ V    ++ +Y R   
Sbjct: 183 KLQLSYQPSVIVYTILLRVYGQVGKIKLAEQAFLEMLEAGCEPDEVACGTMLCTYARWGR 242

Query: 411 LNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSV 470
               L  +  +Q  G  P    +  ++    K       +D++++M   G+ P++FTY+V
Sbjct: 243 HKAMLSFYSAVQERGIIPSIAVFNFMLSSLQKKSLHGKVIDLWREMVDKGVVPNSFTYTV 302

Query: 471 IINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAG 530
           +I+ L K G ++ + + F EM N G +P  VTY+++I+L +K  N   A+KLY DM+   
Sbjct: 303 VISSLVKDGLVEESFKTFYEMKNLGFVPEEVTYSLLISLSSKTGNRDEAIKLYEDMRYRR 362

Query: 531 FEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAW 590
             P   T + ++ +    G    A ++F+EM +   V DE +YGLL+ ++GK G    A 
Sbjct: 363 IVPSNYTCASLLTLYYKNGDYSRAVSLFSEMEKNKIVADEVIYGLLIRIYGKLGLYEDAE 422

Query: 591 EWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSC 649
           + ++   Q GL  N  T  ++    L  G    A  +++ M +  +  S  +Y +LL C
Sbjct: 423 KTFKETEQLGLLTNEKTYIAMAQVHLNSGNFEKALTIMELMRSRNIWFSRFSYIVLLQC 481



 Score =  127 bits (319), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 81/293 (27%), Positives = 144/293 (49%), Gaps = 5/293 (1%)

Query: 348  NWLRR--QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSY 405
            N +RR  + G + D   Y T +  +  A +    N + D+MV  G  P++ TYN +I  Y
Sbjct: 765  NVIRRSFEDGLELDTVAYNTFINAMLGAGRLHFANSIYDRMVSLGVAPSIQTYNTMISVY 824

Query: 406  GRANYLNEALDVFKQMQV--VGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSP 463
            GR   L++A+++F + +   VG   D  TY  LI  + KAG    A  ++++MQ  G+ P
Sbjct: 825  GRGRKLDKAVEMFNKARCSGVGVSLDEKTYTNLISYYGKAGKSHEASLLFREMQEEGIKP 884

Query: 464  DTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLY 523
               +Y+++IN    AG    A +LF  M+  GC P+ +TY  +I    ++  +  A +  
Sbjct: 885  GKVSYNIMINVYATAGLHHEAQELFQAMLRDGCSPDSLTYLALIRAYTQSFKFLEAEETI 944

Query: 524  RDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKA 583
              MQN G  P  V ++ ++      G+ +EAE V+  +      PD   Y  ++  +   
Sbjct: 945  MSMQNEGVLPSCVHFNQLLSAFAKAGFTEEAERVYHTLLSAGLSPDVACYRTMLRGYLDY 1004

Query: 584  GNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGL 636
            G V K   ++E + ++ + P+    +S +  +   G+  +A  +L  M +LG+
Sbjct: 1005 GCVEKGITFFEQIRES-VEPDRFIMSSAVHFYKLAGKELEAEGILDSMKSLGI 1056



 Score =  118 bits (296), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 113/437 (25%), Positives = 193/437 (44%), Gaps = 68/437 (15%)

Query: 377  GAINK---LLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTY 433
            G I+K   L DQ+V+ G      +   LI  YG+ + L +A++VF  ++  GC   ++ Y
Sbjct: 655  GDISKAQNLNDQLVKLGRGAEDASIASLITLYGKQHKLKKAIEVFSAIE--GCTSGKLIY 712

Query: 434  CTLIDIHAKAGFLDVAMDMYK-------------------------KMQAA--------- 459
             ++ID +AK G  + A  +Y+                         K Q A         
Sbjct: 713  ISMIDAYAKCGKAEEAYHLYEEVTGKGIELGVVSISKVVHALANYGKHQEAENVIRRSFE 772

Query: 460  -GLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQS 518
             GL  DT  Y+  IN +  AG L  A+ ++  MV+ G  P++ TYN MI++  + R    
Sbjct: 773  DGLELDTVAYNTFINAMLGAGRLHFANSIYDRMVSLGVAPSIQTYNTMISVYGRGRKLDK 832

Query: 519  ALKLYRDMQ--NAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLL 576
            A++++   +    G   D+ TY+ ++   G  G   EA  +F EM+ +   P +  Y ++
Sbjct: 833  AVEMFNKARCSGVGVSLDEKTYTNLISYYGKAGKSHEASLLFREMQEEGIKPGKVSYNIM 892

Query: 577  VDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGL 636
            ++++  AG   +A E ++AML+ G  P+  T  +L+ A+ +  +  +A   +  M N G+
Sbjct: 893  INVYATAGLHHEAQELFQAMLRDGCSPDSLTYLALIRAYTQSFKFLEAEETIMSMQNEGV 952

Query: 637  KPSLQTYTLLLSCCTEARSPYDMGFC-------HELMAVSGHPAHMFLLSMPSPGPDGQN 689
             PS   +  LLS   +A      GF        H L++    P      +M     D   
Sbjct: 953  LPSCVHFNQLLSAFAKA------GFTEEAERVYHTLLSAGLSPDVACYRTMLRGYLDYGC 1006

Query: 690  VRDHVGSFLEMMHSEDRESKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAVKEK 749
            V   + +F E +  E  E  R ++ + V F   +G + EA  +           D++K  
Sbjct: 1007 VEKGI-TFFEQIR-ESVEPDRFIMSSAVHFYKLAGKELEAEGIL----------DSMKSL 1054

Query: 750  GMSYWLINLHVMSDGTA 766
            G+ + L NL V S   A
Sbjct: 1055 GIPF-LKNLEVGSKTKA 1070



 Score =  118 bits (295), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 80/287 (27%), Positives = 137/287 (47%), Gaps = 2/287 (0%)

Query: 363 YTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQ 422
           Y +M+    +  +      L +++   G +  VV+ ++++H+        EA +V ++  
Sbjct: 712 YISMIDAYAKCGKAEEAYHLYEEVTGKGIELGVVSISKVVHALANYGKHQEAENVIRRSF 771

Query: 423 VVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQ 482
             G E D V Y T I+    AG L  A  +Y +M + G++P   TY+ +I+  G+   L 
Sbjct: 772 EDGLELDTVAYNTFINAMLGAGRLHFANSIYDRMVSLGVAPSIQTYNTMISVYGRGRKLD 831

Query: 483 AAHQLFCEMVNQGCIPNL--VTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSI 540
            A ++F +    G   +L   TY  +I+   KA     A  L+R+MQ  G +P KV+Y+I
Sbjct: 832 KAVEMFNKARCSGVGVSLDEKTYTNLISYYGKAGKSHEASLLFREMQEEGIKPGKVSYNI 891

Query: 541 VMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAG 600
           ++ V    G   EA+ +F  M R    PD   Y  L+  + ++    +A E   +M   G
Sbjct: 892 MINVYATAGLHHEAQELFQAMLRDGCSPDSLTYLALIRAYTQSFKFLEAEETIMSMQNEG 951

Query: 601 LRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
           + P+    N LLSAF + G   +A  +   +L+ GL P +  Y  +L
Sbjct: 952 VLPSCVHFNQLLSAFAKAGFTEEAERVYHTLLSAGLSPDVACYRTML 998



 Score = 88.2 bits (217), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 56/221 (25%), Positives = 103/221 (46%), Gaps = 2/221 (0%)

Query: 343  ALGFFNWLR-RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRL 401
            A+  FN  R    G   DE TYT ++   G+A +    + L  +M  +G +P  V+YN +
Sbjct: 833  AVEMFNKARCSGVGVSLDEKTYTNLISYYGKAGKSHEASLLFREMQEEGIKPGKVSYNIM 892

Query: 402  IHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGL 461
            I+ Y  A   +EA ++F+ M   GC PD +TY  LI  + ++     A +    MQ  G+
Sbjct: 893  INVYATAGLHHEAQELFQAMLRDGCSPDSLTYLALIRAYTQSFKFLEAEETIMSMQNEGV 952

Query: 462  SPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALK 521
             P    ++ +++   KAG  + A +++  +++ G  P++  Y  M+         +  + 
Sbjct: 953  LPSCVHFNQLLSAFAKAGFTEEAERVYHTLLSAGLSPDVACYRTMLRGYLDYGCVEKGIT 1012

Query: 522  LYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMR 562
             +  ++ +  EPD+   S  +      G   EAE +   M+
Sbjct: 1013 FFEQIRES-VEPDRFIMSSAVHFYKLAGKELEAEGILDSMK 1052



 Score = 84.7 bits (208), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 72/303 (23%), Positives = 134/303 (44%), Gaps = 2/303 (0%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           G   +  TYT ++  L +        K   +M   G  P  VTY+ LI    +    +EA
Sbjct: 292 GVVPNSFTYTVVISSLVKDGLVEESFKTFYEMKNLGFVPEEVTYSLLISLSSKTGNRDEA 351

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
           + +++ M+     P   T  +L+ ++ K G    A+ ++ +M+   +  D   Y ++I  
Sbjct: 352 IKLYEDMRYRRIVPSNYTCASLLTLYYKNGDYSRAVSLFSEMEKNKIVADEVIYGLLIRI 411

Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPD 534
            GK G  + A + F E    G + N  TY  M  +   + N++ AL +   M++      
Sbjct: 412 YGKLGLYEDAEKTFKETEQLGLLTNEKTYIAMAQVHLNSGNFEKALTIMELMRSRNIWFS 471

Query: 535 KVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYE 594
           + +Y ++++       L  AEA F  +  K  +PD      +++L+ K   + KA ++  
Sbjct: 472 RFSYIVLLQCYVMKEDLASAEATFQAL-SKTGLPDAGSCNDMLNLYIKLDLLEKAKDFIF 530

Query: 595 AMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGL-KPSLQTYTLLLSCCTEA 653
            + +  +  ++  C +++  + + G L DA  L+Q M   GL K S    TL L    E+
Sbjct: 531 QIRKDPVEFDMELCKTVMKVYCKKGMLRDAKQLIQEMGTNGLFKDSEFIQTLSLVMHEES 590

Query: 654 RSP 656
             P
Sbjct: 591 ERP 593


>gi|2335106|gb|AAC02776.1| putative salt-inducible protein [Arabidopsis thaliana]
          Length = 810

 Score =  147 bits (370), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 98/364 (26%), Positives = 170/364 (46%), Gaps = 38/364 (10%)

Query: 385 QMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAG 444
           ++ ++ C  N + YN +I  + R N++++A  +F +MQ   C+PD  TY  LI+ H +AG
Sbjct: 134 KIQKNYCARNDI-YNMMIRLHARHNWVDQARGLFFEMQKWSCKPDAETYDALINAHGRAG 192

Query: 445 FLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYN 504
               AM++   M  A ++P   TY+ +IN  G +G+ + A ++  +M + G  P+LVT+N
Sbjct: 193 QWRWAMNLMDDMLRAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHN 252

Query: 505 IMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRK 564
           I+++     R Y  AL  +  M+ A   PD  T++I++  L   G   +A  +F  MR K
Sbjct: 253 IVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREK 312

Query: 565 --NWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLS 622
                PD   +  ++ L+   G +      +EAM+  GL+PN+ + N+L+ A+   G   
Sbjct: 313 RAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSG 372

Query: 623 DAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGFCHELMAVSGHPAHMFLLSMPS 682
            A  +L  +   G+ P + +YT LL+    +R P             G    +FL     
Sbjct: 373 TALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQP-------------GKAKEVFL----- 414

Query: 683 PGPDGQNVRDHVGSFLEMMHSEDRESKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVY 742
                            MM  E R+      +A++D    +G   EA  ++    Q  + 
Sbjct: 415 -----------------MMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIK 457

Query: 743 PDAV 746
           P+ V
Sbjct: 458 PNVV 461



 Score =  141 bits (355), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 90/318 (28%), Positives = 160/318 (50%), Gaps = 11/318 (3%)

Query: 348 NWLRRQAGF---------KHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTY 398
           NW+ +  G          K D  TY  ++   GRA Q+     L+D M+R    P+  TY
Sbjct: 157 NWVDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDMLRAAIAPSRSTY 216

Query: 399 NRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQA 458
           N LI++ G +    EAL+V K+M   G  PD VT+  ++  +        A+  ++ M+ 
Sbjct: 217 NNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKG 276

Query: 459 AGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQ--GCIPNLVTYNIMIALQAKARNY 516
           A + PDT T+++II CL K G    A  LF  M  +   C P++VT+  ++ L +     
Sbjct: 277 AKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEI 336

Query: 517 QSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLL 576
           ++   ++  M   G +P+ V+Y+ +M      G    A +V  ++++   +PD   Y  L
Sbjct: 337 ENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCL 396

Query: 577 VDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGL 636
           ++ +G++    KA E +  M +   +PNV T N+L+ A+   G L++A  + + M   G+
Sbjct: 397 LNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGI 456

Query: 637 KPSLQTYTLLLSCCTEAR 654
           KP++ +   LL+ C+ ++
Sbjct: 457 KPNVVSVCTLLAACSRSK 474



 Score =  115 bits (288), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 95/390 (24%), Positives = 164/390 (42%), Gaps = 93/390 (23%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           +Q G   D  +YT ++   GR+RQ G   ++   M ++  +PNVVTYN LI +YG   +L
Sbjct: 382 KQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFL 441

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTL----------------------------------- 436
            EA+++F+QM+  G +P+ V+ CTL                                   
Sbjct: 442 AEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSA 501

Query: 437 IDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIIN--C-------------------- 474
           I  +  A  L+ A+ +Y+ M+   +  D+ T++++I+  C                    
Sbjct: 502 IGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEMEDLSI 561

Query: 475 -LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEP 533
            L K G +  A  +F +M   GC P+++ Y  M+     +  +  A +L+ +M+  G EP
Sbjct: 562 PLTKEGQVTEAESIFNQMKMAGCEPDVIAYTSMLHAYNASEKWGKACELFLEMEANGIEP 621

Query: 534 DKVTYSIVMEVLGHCG----------YLDEAE-----AVFAEM-----RRKNWV------ 567
           D +  S +M      G           + E E     AVF E+       + W       
Sbjct: 622 DSIACSALMRAFNKGGQPSNVFVLMDLMREKEIPFTGAVFFEIFSACNTLQEWKRAIDLI 681

Query: 568 ----PDEPVYGL-----LVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRV 618
               P  P   +     ++ L+GK+G V    + +  ++ +G+  N+ T   LL   L V
Sbjct: 682 QMMDPYLPSLSIGLTNQMLHLFGKSGKVEAMMKLFYKIIASGVGINLKTYAILLEHLLAV 741

Query: 619 GQLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
           G       +L+ M   G++PS Q Y  ++S
Sbjct: 742 GNWRKYIEVLEWMSGAGIQPSNQMYRDIIS 771



 Score = 98.6 bits (244), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 70/317 (22%), Positives = 143/317 (45%), Gaps = 9/317 (2%)

Query: 322 NYSMDAYQANQVLKQLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINK 381
           N  + AY++ +       ++ AL +F  L + A  + D  T+  ++  L +  Q      
Sbjct: 252 NIVLSAYKSGR------QYSKALSYFE-LMKGAKVRPDTTTFNIIIYCLSKLGQSSQALD 304

Query: 382 LLDQM--VRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDI 439
           L + M   R  C+P+VVT+  ++H Y     +     VF+ M   G +P+ V+Y  L+  
Sbjct: 305 LFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGA 364

Query: 440 HAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPN 499
           +A  G    A+ +   ++  G+ PD  +Y+ ++N  G++     A ++F  M  +   PN
Sbjct: 365 YAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPN 424

Query: 500 LVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFA 559
           +VTYN +I           A++++R M+  G +P+ V+   ++            + V +
Sbjct: 425 VVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLS 484

Query: 560 EMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVG 619
             + +    +   Y   +  +  A  + KA   Y++M +  ++ +  T   L+S   R+ 
Sbjct: 485 AAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMS 544

Query: 620 QLSDAYHLLQGMLNLGL 636
           +  +A   L+ M +L +
Sbjct: 545 KYPEAISYLKEMEDLSI 561



 Score = 46.2 bits (108), Expect = 0.068,   Method: Compositional matrix adjust.
 Identities = 29/114 (25%), Positives = 57/114 (50%), Gaps = 1/114 (0%)

Query: 538 YSIVMEVLGHCGYLDEAEAVFAEMR-RKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAM 596
           + +++  L   G ++    VF  M+ +KN+     +Y +++ L  +   V +A   +  M
Sbjct: 110 FPVLIRELSRRGCIELCVNVFKWMKIQKNYCARNDIYNMMIRLHARHNWVDQARGLFFEM 169

Query: 597 LQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCC 650
            +   +P+  T ++L++A  R GQ   A +L+  ML   + PS  TY  L++ C
Sbjct: 170 QKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDMLRAAIAPSRSTYNNLINAC 223


>gi|218188645|gb|EEC71072.1| hypothetical protein OsI_02831 [Oryza sativa Indica Group]
          Length = 800

 Score =  147 bits (370), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 82/296 (27%), Positives = 148/296 (50%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           +Q G   +++TY T++  L    +   + ++L +   +G  P  +TYN +I+ + +A  +
Sbjct: 483 KQNGVSCNDYTYNTLINGLCVVGRVCEVGEMLKRFETEGFVPTAMTYNSIINGFIKAGMM 542

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
             A  V++QM   G  P+ VTY + ID + K    D+A+ M   ++  GL PD   Y+ +
Sbjct: 543 GSAFAVYQQMCAKGIPPNIVTYTSFIDGYCKTSCCDLALKMLNDVRCKGLRPDIAAYNSL 602

Query: 472 INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF 531
           I    + G++  A Q+   M+  G +PN+  YN  I      +  + AL+ Y  M   G 
Sbjct: 603 IYGFCQEGNMSHALQVLVLMLKDGLLPNISVYNSFITGYKNLKMMEEALRFYEKMIKEGI 662

Query: 532 EPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWE 591
           + D  TY+ +++     G +  A  +++EM  K  +PD   +  L     + G++  A +
Sbjct: 663 DLDTATYTTLIDGFSKDGNVTFALKLYSEMVAKGNIPDHITFTALTHGLCRNGDIDDARK 722

Query: 592 WYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
             + M +  +RPNV   N L++ +LR G+L +A+ L   ML   + P   TY +L+
Sbjct: 723 LLDEMNRLDIRPNVLMYNMLINGYLRNGKLQEAFRLHDEMLERKIMPDDTTYDILV 778



 Score =  131 bits (329), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 105/439 (23%), Positives = 197/439 (44%), Gaps = 26/439 (5%)

Query: 329 QANQVLKQLQDH----------TVALGFFN---WLRRQAGFKH-------DEHTYTTMVG 368
           +A ++ +Q++DH           V  G  N   W    + FK        D  TY  ++ 
Sbjct: 335 KAYELCRQMRDHGLLPSTNEFNMVIKGLLNDKLWKDAVSLFKEMADSGIPDAFTYNILIH 394

Query: 369 ILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEP 428
            L + R+      L ++M   G +P +VTY+ L+  Y     ++EA+ ++ +M   G  P
Sbjct: 395 WLCQRRKIREALNLWEKMNETGVKPYIVTYHSLLLCYCVNGCMDEAVKLYTEMPGKGFTP 454

Query: 429 DRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLF 488
           + VTY TL+  H      D A  +  +M+  G+S + +TY+ +IN L   G +    ++ 
Sbjct: 455 NVVTYTTLMKGHINKAAFDKAYALLAEMKQNGVSCNDYTYNTLINGLCVVGRVCEVGEML 514

Query: 489 CEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHC 548
                +G +P  +TYN +I    KA    SA  +Y+ M   G  P+ VTY+  ++  G+C
Sbjct: 515 KRFETEGFVPTAMTYNSIINGFIKAGMMGSAFAVYQQMCAKGIPPNIVTYTSFID--GYC 572

Query: 549 --GYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVP 606
                D A  +  ++R K   PD   Y  L+  + + GN+  A +    ML+ GL PN+ 
Sbjct: 573 KTSCCDLALKMLNDVRCKGLRPDIAAYNSLIYGFCQEGNMSHALQVLVLMLKDGLLPNIS 632

Query: 607 TCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCT-EARSPYDMGFCHEL 665
             NS ++ +  +  + +A    + M+  G+     TYT L+   + +    + +    E+
Sbjct: 633 VYNSFITGYKNLKMMEEALRFYEKMIKEGIDLDTATYTTLIDGFSKDGNVTFALKLYSEM 692

Query: 666 MAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRESKRGLVDAVVDFLHKSGL 725
           +A    P H+   ++ + G       D     L+ M+  D      + + +++   ++G 
Sbjct: 693 VAKGNIPDHITFTAL-THGLCRNGDIDDARKLLDEMNRLDIRPNVLMYNMLINGYLRNGK 751

Query: 726 KEEAGSVWEVAAQKNVYPD 744
            +EA  + +   ++ + PD
Sbjct: 752 LQEAFRLHDEMLERKIMPD 770



 Score =  123 bits (308), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 99/371 (26%), Positives = 166/371 (44%), Gaps = 60/371 (16%)

Query: 326 DAYQANQVLKQLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQ 385
           DA +A  VL+++QD     GF  W          + T+ ++V +L +  +      + D+
Sbjct: 227 DANRALLVLRKMQDA----GFVPW----------DFTFNSVVDVLVKGGRMEEALHIKDE 272

Query: 386 MVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGF 445
           ++  G + +VV    L+H Y     + +ALD+F++    G  P  VTY  LI    + G 
Sbjct: 273 LLATGKKMSVVLATTLMHGYCLQREVRKALDIFEETLRDGLVPTDVTYTVLIRGCTEEGM 332

Query: 446 LDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNI 505
            + A ++ ++M+  GL P T  ++++I  L      + A  LF EM + G IP+  TYNI
Sbjct: 333 PEKAYELCRQMRDHGLLPSTNEFNMVIKGLLNDKLWKDAVSLFKEMADSG-IPDAFTYNI 391

Query: 506 MIALQAKARNYQSAL-----------------------------------KLYRDMQNAG 530
           +I    + R  + AL                                   KLY +M   G
Sbjct: 392 LIHWLCQRRKIREALNLWEKMNETGVKPYIVTYHSLLLCYCVNGCMDEAVKLYTEMPGKG 451

Query: 531 FEPDKVTYSIVMEVLGHC--GYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRK 588
           F P+ VTY+ +M+  GH      D+A A+ AEM++     ++  Y  L++     G V +
Sbjct: 452 FTPNVVTYTTLMK--GHINKAAFDKAYALLAEMKQNGVSCNDYTYNTLINGLCVVGRVCE 509

Query: 589 AWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL- 647
             E  +     G  P   T NS+++ F++ G +  A+ + Q M   G+ P++ TYT  + 
Sbjct: 510 VGEMLKRFETEGFVPTAMTYNSIINGFIKAGMMGSAFAVYQQMCAKGIPPNIVTYTSFID 569

Query: 648 -----SCCTEA 653
                SCC  A
Sbjct: 570 GYCKTSCCDLA 580



 Score =  103 bits (257), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 95/424 (22%), Positives = 166/424 (39%), Gaps = 24/424 (5%)

Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLI 402
           AL  F    R  G    + TYT ++             +L  QM   G  P+   +N +I
Sbjct: 301 ALDIFEETLRD-GLVPTDVTYTVLIRGCTEEGMPEKAYELCRQMRDHGLLPSTNEFNMVI 359

Query: 403 HSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLS 462
                     +A+ +FK+M   G  PD  TY  LI    +   +  A+++++KM   G+ 
Sbjct: 360 KGLLNDKLWKDAVSLFKEMADSGI-PDAFTYNILIHWLCQRRKIREALNLWEKMNETGVK 418

Query: 463 PDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKL 522
           P   TY  ++ C    G +  A +L+ EM  +G  PN+VTY  ++        +  A  L
Sbjct: 419 PYIVTYHSLLLCYCVNGCMDEAVKLYTEMPGKGFTPNVVTYTTLMKGHINKAAFDKAYAL 478

Query: 523 YRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGK 582
             +M+  G   +  TY+ ++  L   G + E   +      + +VP    Y  +++ + K
Sbjct: 479 LAEMKQNGVSCNDYTYNTLINGLCVVGRVCEVGEMLKRFETEGFVPTAMTYNSIINGFIK 538

Query: 583 AGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQT 642
           AG +  A+  Y+ M   G+ PN+ T  S +  + +      A  +L  +   GL+P +  
Sbjct: 539 AGMMGSAFAVYQQMCAKGIPPNIVTYTSFIDGYCKTSCCDLALKMLNDVRCKGLRPDIAA 598

Query: 643 YTLLLSCCTEARSPYDMGFCHE-----------LMAVSGHPAHMFLLSMPSPGPDGQNVR 691
           Y  L+            GFC E           LM   G   ++ + +    G     + 
Sbjct: 599 YNSLI-----------YGFCQEGNMSHALQVLVLMLKDGLLPNISVYNSFITGYKNLKMM 647

Query: 692 DHVGSFLEMMHSEDRESKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAVKEKGM 751
           +    F E M  E  +        ++D   K G    A  ++     K   PD +    +
Sbjct: 648 EEALRFYEKMIKEGIDLDTATYTTLIDGFSKDGNVTFALKLYSEMVAKGNIPDHITFTAL 707

Query: 752 SYWL 755
           ++ L
Sbjct: 708 THGL 711



 Score = 92.8 bits (229), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 57/218 (26%), Positives = 106/218 (48%)

Query: 362 TYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQM 421
           TYT+ +    +        K+L+ +   G +P++  YN LI+ + +   ++ AL V   M
Sbjct: 563 TYTSFIDGYCKTSCCDLALKMLNDVRCKGLRPDIAAYNSLIYGFCQEGNMSHALQVLVLM 622

Query: 422 QVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHL 481
              G  P+   Y + I  +     ++ A+  Y+KM   G+  DT TY+ +I+   K G++
Sbjct: 623 LKDGLLPNISVYNSFITGYKNLKMMEEALRFYEKMIKEGIDLDTATYTTLIDGFSKDGNV 682

Query: 482 QAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIV 541
             A +L+ EMV +G IP+ +T+  +     +  +   A KL  +M      P+ + Y+++
Sbjct: 683 TFALKLYSEMVAKGNIPDHITFTALTHGLCRNGDIDDARKLLDEMNRLDIRPNVLMYNML 742

Query: 542 MEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDL 579
           +      G L EA  +  EM  +  +PD+  Y +LV +
Sbjct: 743 INGYLRNGKLQEAFRLHDEMLERKIMPDDTTYDILVGM 780



 Score = 83.6 bits (205), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 65/271 (23%), Positives = 120/271 (44%), Gaps = 36/271 (13%)

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
           ++A+ +F +M     EPD+      I    K    + A+ + +KMQ AG  P  FT++ +
Sbjct: 194 DDAVRLFDEMPASEIEPDQRVCSVAIASLCKLRDANRALLVLRKMQDAGFVPWDFTFNSV 253

Query: 472 INCLGKAGHLQAAHQ-----------------------------------LFCEMVNQGC 496
           ++ L K G ++ A                                     +F E +  G 
Sbjct: 254 VDVLVKGGRMEEALHIKDELLATGKKMSVVLATTLMHGYCLQREVRKALDIFEETLRDGL 313

Query: 497 IPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEA 556
           +P  VTY ++I    +    + A +L R M++ G  P    +++V++ L +     +A +
Sbjct: 314 VPTDVTYTVLIRGCTEEGMPEKAYELCRQMRDHGLLPSTNEFNMVIKGLLNDKLWKDAVS 373

Query: 557 VFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFL 616
           +F EM   + +PD   Y +L+    +   +R+A   +E M + G++P + T +SLL  + 
Sbjct: 374 LFKEM-ADSGIPDAFTYNILIHWLCQRRKIREALNLWEKMNETGVKPYIVTYHSLLLCYC 432

Query: 617 RVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
             G + +A  L   M   G  P++ TYT L+
Sbjct: 433 VNGCMDEAVKLYTEMPGKGFTPNVVTYTTLM 463



 Score = 75.9 bits (185), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 55/205 (26%), Positives = 93/205 (45%), Gaps = 36/205 (17%)

Query: 342 VALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRL 401
           +AL   N +R + G + D   Y +++    +        ++L  M++DG  PN+  YN  
Sbjct: 579 LALKMLNDVRCK-GLRPDIAAYNSLIYGFCQEGNMSHALQVLVLMLKDGLLPNISVYNSF 637

Query: 402 IHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGL 461
           I  Y     + EAL  +++M   G + D  TY TLID  +K G +  A+ +Y +M A G 
Sbjct: 638 ITGYKNLKMMEEALRFYEKMIKEGIDLDTATYTTLIDGFSKDGNVTFALKLYSEMVAKGN 697

Query: 462 SPD--TFT---------------------------------YSVIINCLGKAGHLQAAHQ 486
            PD  TFT                                 Y+++IN   + G LQ A +
Sbjct: 698 IPDHITFTALTHGLCRNGDIDDARKLLDEMNRLDIRPNVLMYNMLINGYLRNGKLQEAFR 757

Query: 487 LFCEMVNQGCIPNLVTYNIMIALQA 511
           L  EM+ +  +P+  TY+I++ +++
Sbjct: 758 LHDEMLERKIMPDDTTYDILVGMKS 782



 Score = 72.4 bits (176), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 67/252 (26%), Positives = 111/252 (44%)

Query: 421 MQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGH 480
           M+  G  PD  +   L+ + A++     A+ +  +M+  G   D + + V++    K G 
Sbjct: 133 MEARGVTPDAKSRTDLLAVTARSASAADALALLAEMRGKGHPLDAWMFDVVMRACFKEGM 192

Query: 481 LQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSI 540
              A +LF EM      P+    ++ IA   K R+   AL + R MQ+AGF P   T++ 
Sbjct: 193 YDDAVRLFDEMPASEIEPDQRVCSVAIASLCKLRDANRALLVLRKMQDAGFVPWDFTFNS 252

Query: 541 VMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAG 600
           V++VL   G ++EA  +  E+          +   L+  +     VRKA + +E  L+ G
Sbjct: 253 VVDVLVKGGRMEEALHIKDELLATGKKMSVVLATTLMHGYCLQREVRKALDIFEETLRDG 312

Query: 601 LRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMG 660
           L P   T   L+      G    AY L + M + GL PS   + +++      +   D  
Sbjct: 313 LVPTDVTYTVLIRGCTEEGMPEKAYELCRQMRDHGLLPSTNEFNMVIKGLLNDKLWKDAV 372

Query: 661 FCHELMAVSGHP 672
              + MA SG P
Sbjct: 373 SLFKEMADSGIP 384


>gi|255541015|ref|XP_002511572.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223550687|gb|EEF52174.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 735

 Score =  147 bits (370), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 101/375 (26%), Positives = 184/375 (49%), Gaps = 11/375 (2%)

Query: 298 VESVSRILRQWKWGPLAEEALGNTNYSMDAYQANQVLKQLQDHTVALGFFNWLRRQAGFK 357
           ++  SRIL+  K+     +     +  +   Q   +     DH +AL F   L +  G K
Sbjct: 309 IQDASRILKDAKFKGFVPDEFTYCSLIIGVCQDGDI-----DHALAL-FEEALGK--GLK 360

Query: 358 HDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDV 417
                Y T++  L +        +L++ M ++G  P++ TYN +I+   +   +++A ++
Sbjct: 361 PSIVLYNTLIKGLSQQGLVLKALQLMNDMSKEGMSPDIWTYNLVINGLCKMGCVSDANNL 420

Query: 418 FKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGK 477
                  G  PD  T+ TLID + K   +D A+ +   M + G++PD  TY+ I+N L K
Sbjct: 421 LNAAIAKGYLPDIFTFNTLIDGYCKRLKMDNAIGILDSMWSHGVTPDVITYNSILNGLCK 480

Query: 478 AGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVT 537
           A   +   + F  ++ +GC+PN++TYNI+I    KAR    AL L  +++N G  PD V+
Sbjct: 481 AAKPEDVMETFKMIMEKGCLPNIITYNILIESLCKARKVTEALDLLEEIRNRGLIPDPVS 540

Query: 538 YSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDE-PVYGLLVDLWGKAGNVRKAWEWYEAM 596
           +  V+    + G LDEA  +F  M ++  +      Y ++++ + +  ++  A + +  M
Sbjct: 541 FGTVISGFCNNGDLDEAYQLFRRMEQQYRICHTVATYNIMINAFSEKLDMDMAQKLFHEM 600

Query: 597 LQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSC-CTEARS 655
              G  P+  T   ++  F +VG ++  Y  L   + +G  PSL T+  +++C C + R 
Sbjct: 601 GDKGCDPDSYTYRVMIDGFCKVGNVNSGYDFLLKEIEIGFVPSLTTFGRVINCLCVQHRV 660

Query: 656 PYDMGFCHELMAVSG 670
              +G  H LM  +G
Sbjct: 661 HEAVGIVH-LMVRTG 674



 Score =  145 bits (366), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 113/429 (26%), Positives = 201/429 (46%), Gaps = 26/429 (6%)

Query: 333 VLKQLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQ 392
           VLK  +D   AL  FN ++++ GFKH   TY  M+  LG   +F A+ ++L +M R    
Sbjct: 13  VLKYQKDPLKALSIFNSVKKEDGFKHTFLTYKRMIEKLGFHGEFDAMERVLMEM-RLNVD 71

Query: 393 PNVV--TYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAM 450
            +++   Y   + +YGR   + EA+DVF++M    CEP   +Y  +++I  + G+ + A 
Sbjct: 72  NSLLEGVYVSAMRNYGRKGKVQEAVDVFERMDFYNCEPSIFSYNAIMNILVEYGYFNQAH 131

Query: 451 DMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQ 510
            +Y +M+  G++PD  T+++ I    +     AA +L   M +QGC  N V Y  +I+  
Sbjct: 132 KVYLRMKHEGIAPDVCTFTIRIKSFCRTKRPLAALRLLNNMPSQGCELNAVVYCTVIS-G 190

Query: 511 AKARNYQ-SALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPD 569
               NYQ  A +L+  M   G  P   T++ +M +L   G+L E E +  ++ +    P+
Sbjct: 191 FYEENYQVEAYELFNKMLRLGIFPHIATFNKLMHILCKKGHLQEGEKLLNKVLKNGVCPN 250

Query: 570 EPVYGLLVD-------LWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLS 622
              + + +        L G    V +A  +   M+  GL P+  T N+++  + +VG++ 
Sbjct: 251 LFTFNIFIQGLCRKGVLEGANSKVVEAENYLHKMVNKGLEPDDFTYNTIIYGYSKVGKIQ 310

Query: 623 DAYHLLQGMLNLGLKPSLQTY-TLLLSCCTEARSPYDMGFCHELMAVSGHPAHMFLLSMP 681
           DA  +L+     G  P   TY +L++  C +    + +    E +     P+ + L +  
Sbjct: 311 DASRILKDAKFKGFVPDEFTYCSLIIGVCQDGDIDHALALFEEALGKGLKPS-IVLYNTL 369

Query: 682 SPGPDGQNVRDHVGSFLEMMHSEDRESKRGL------VDAVVDFLHKSGLKEEAGSVWEV 735
             G   Q      G  L+ +   +  SK G+       + V++ L K G   +A ++   
Sbjct: 370 IKGLSQQ------GLVLKALQLMNDMSKEGMSPDIWTYNLVINGLCKMGCVSDANNLLNA 423

Query: 736 AAQKNVYPD 744
           A  K   PD
Sbjct: 424 AIAKGYLPD 432



 Score =  129 bits (325), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 93/341 (27%), Positives = 157/341 (46%), Gaps = 24/341 (7%)

Query: 322 NYSMDAYQANQVLKQLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINK 381
           NY ++AY+                 FN + R   F H   T+  ++ IL +        K
Sbjct: 195 NYQVEAYE----------------LFNKMLRLGIFPHIA-TFNKLMHILCKKGHLQEGEK 237

Query: 382 LLDQMVRDGCQPNVVTYNRLIHSYGRANYLN-------EALDVFKQMQVVGCEPDRVTYC 434
           LL++++++G  PN+ T+N  I    R   L        EA +   +M   G EPD  TY 
Sbjct: 238 LLNKVLKNGVCPNLFTFNIFIQGLCRKGVLEGANSKVVEAENYLHKMVNKGLEPDDFTYN 297

Query: 435 TLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQ 494
           T+I  ++K G +  A  + K  +  G  PD FTY  +I  + + G +  A  LF E + +
Sbjct: 298 TIIYGYSKVGKIQDASRILKDAKFKGFVPDEFTYCSLIIGVCQDGDIDHALALFEEALGK 357

Query: 495 GCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEA 554
           G  P++V YN +I   ++      AL+L  DM   G  PD  TY++V+  L   G + +A
Sbjct: 358 GLKPSIVLYNTLIKGLSQQGLVLKALQLMNDMSKEGMSPDIWTYNLVINGLCKMGCVSDA 417

Query: 555 EAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSA 614
             +      K ++PD   +  L+D + K   +  A    ++M   G+ P+V T NS+L+ 
Sbjct: 418 NNLLNAAIAKGYLPDIFTFNTLIDGYCKRLKMDNAIGILDSMWSHGVTPDVITYNSILNG 477

Query: 615 FLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARS 655
             +  +  D     + ++  G  P++ TY +L+    +AR 
Sbjct: 478 LCKAAKPEDVMETFKMIMEKGCLPNIITYNILIESLCKARK 518



 Score =  115 bits (287), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 75/286 (26%), Positives = 139/286 (48%), Gaps = 2/286 (0%)

Query: 348 NWLRRQA--GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSY 405
           N+L +    G + D+ TY T++    +  +    +++L      G  P+  TY  LI   
Sbjct: 279 NYLHKMVNKGLEPDDFTYNTIIYGYSKVGKIQDASRILKDAKFKGFVPDEFTYCSLIIGV 338

Query: 406 GRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDT 465
            +   ++ AL +F++    G +P  V Y TLI   ++ G +  A+ +   M   G+SPD 
Sbjct: 339 CQDGDIDHALALFEEALGKGLKPSIVLYNTLIKGLSQQGLVLKALQLMNDMSKEGMSPDI 398

Query: 466 FTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRD 525
           +TY+++IN L K G +  A+ L    + +G +P++ T+N +I    K     +A+ +   
Sbjct: 399 WTYNLVINGLCKMGCVSDANNLLNAAIAKGYLPDIFTFNTLIDGYCKRLKMDNAIGILDS 458

Query: 526 MQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGN 585
           M + G  PD +TY+ ++  L      ++    F  +  K  +P+   Y +L++   KA  
Sbjct: 459 MWSHGVTPDVITYNSILNGLCKAAKPEDVMETFKMIMEKGCLPNIITYNILIESLCKARK 518

Query: 586 VRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGM 631
           V +A +  E +   GL P+  +  +++S F   G L +AY L + M
Sbjct: 519 VTEALDLLEEIRNRGLIPDPVSFGTVISGFCNNGDLDEAYQLFRRM 564



 Score =  113 bits (283), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 102/419 (24%), Positives = 174/419 (41%), Gaps = 63/419 (15%)

Query: 289 RHFASTGNVVESVSRILRQWKWGPLAEEALGNTNYSMDAYQANQVLKQLQDHTVALGFFN 348
           R++   G V E+V    R   +         N   S+ +Y A      + +  V  G+FN
Sbjct: 84  RNYGRKGKVQEAVDVFERMDFY---------NCEPSIFSYNA------IMNILVEYGYFN 128

Query: 349 -----WLR-RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLI 402
                +LR +  G   D  T+T  +    R ++  A  +LL+ M   GC+ N V Y  +I
Sbjct: 129 QAHKVYLRMKHEGIAPDVCTFTIRIKSFCRTKRPLAALRLLNNMPSQGCELNAVVYCTVI 188

Query: 403 HSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDV-------------- 448
             +   NY  EA ++F +M  +G  P   T+  L+ I  K G L                
Sbjct: 189 SGFYEENYQVEAYELFNKMLRLGIFPHIATFNKLMHILCKKGHLQEGEKLLNKVLKNGVC 248

Query: 449 ----------------------------AMDMYKKMQAAGLSPDTFTYSVIINCLGKAGH 480
                                       A +   KM   GL PD FTY+ II    K G 
Sbjct: 249 PNLFTFNIFIQGLCRKGVLEGANSKVVEAENYLHKMVNKGLEPDDFTYNTIIYGYSKVGK 308

Query: 481 LQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSI 540
           +Q A ++  +   +G +P+  TY  +I    +  +   AL L+ +    G +P  V Y+ 
Sbjct: 309 IQDASRILKDAKFKGFVPDEFTYCSLIIGVCQDGDIDHALALFEEALGKGLKPSIVLYNT 368

Query: 541 VMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAG 600
           +++ L   G + +A  +  +M ++   PD   Y L+++   K G V  A     A +  G
Sbjct: 369 LIKGLSQQGLVLKALQLMNDMSKEGMSPDIWTYNLVINGLCKMGCVSDANNLLNAAIAKG 428

Query: 601 LRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDM 659
             P++ T N+L+  + +  ++ +A  +L  M + G+ P + TY  +L+   +A  P D+
Sbjct: 429 YLPDIFTFNTLIDGYCKRLKMDNAIGILDSMWSHGVTPDVITYNSILNGLCKAAKPEDV 487



 Score = 97.4 bits (241), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 65/219 (29%), Positives = 106/219 (48%), Gaps = 1/219 (0%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           G   D  TY +++  L +A +   + +    ++  GC PN++TYN LI S  +A  + EA
Sbjct: 463 GVTPDVITYNSILNGLCKAAKPEDVMETFKMIMEKGCLPNIITYNILIESLCKARKVTEA 522

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKM-QAAGLSPDTFTYSVIIN 473
           LD+ ++++  G  PD V++ T+I      G LD A  ++++M Q   +     TY+++IN
Sbjct: 523 LDLLEEIRNRGLIPDPVSFGTVISGFCNNGDLDEAYQLFRRMEQQYRICHTVATYNIMIN 582

Query: 474 CLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEP 533
              +   +  A +LF EM ++GC P+  TY +MI    K  N  S           GF P
Sbjct: 583 AFSEKLDMDMAQKLFHEMGDKGCDPDSYTYRVMIDGFCKVGNVNSGYDFLLKEIEIGFVP 642

Query: 534 DKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPV 572
              T+  V+  L     + EA  +   M R   VP+  V
Sbjct: 643 SLTTFGRVINCLCVQHRVHEAVGIVHLMVRTGVVPEAVV 681


>gi|449453087|ref|XP_004144290.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Cucumis sativus]
 gi|449522905|ref|XP_004168466.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Cucumis sativus]
          Length = 915

 Score =  147 bits (370), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 92/287 (32%), Positives = 148/287 (51%), Gaps = 2/287 (0%)

Query: 362 TYTTMVGILGR-ARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQ 420
           TYT ++  L +  R+  A+N +  +M    CQPNV TY  LI S    +  ++A  +   
Sbjct: 311 TYTVIIFALCQLGRKTEALN-MFKEMTEKHCQPNVHTYTVLICSLCEDSNFDDAKKILNG 369

Query: 421 MQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGH 480
           M   G  P  VTY  LID + K G    A+++   M++   SP+  TY+ +I    +  +
Sbjct: 370 MLEKGLIPSVVTYNALIDGYCKKGLSASALEILSLMESNNCSPNARTYNELILGFCRGKN 429

Query: 481 LQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSI 540
           +  A  L  +M+ +   PN+VTYNI+I  Q K  +  SA KL   M  +G  PD+ TYS+
Sbjct: 430 IHKAMSLLHKMLERKLQPNVVTYNILIHGQCKEGDLGSAYKLLSLMNESGLVPDEWTYSV 489

Query: 541 VMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAG 600
            ++ L   G ++EA ++F  ++ K    +E +Y  L+D + K G V       + ML AG
Sbjct: 490 FIDTLCKRGLVEEARSLFESLKEKGIKANEVIYSTLIDGYCKVGKVSDGRFLLDKMLSAG 549

Query: 601 LRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
             PN  T NSL+  + +     +A  L+  M+   ++P+  TYT+L+
Sbjct: 550 CVPNSITYNSLIDGYCKEKNFKEARLLVDIMIKRDIEPAADTYTILI 596



 Score =  142 bits (358), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 99/349 (28%), Positives = 158/349 (45%), Gaps = 50/349 (14%)

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
           QAG   D  TYT+++    R +   A N +   M   GC  N V+Y  LIH +  A  ++
Sbjct: 232 QAGLSLDTFTYTSLILGYCRNKNVDAANAIFLSMPNKGCLRNEVSYTNLIHGFCEARRVD 291

Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
           EAL +F QM    C P   TY  +I    + G    A++M+K+M      P+  TY+V+I
Sbjct: 292 EALKLFSQMHEDNCWPTVRTYTVIIFALCQLGRKTEALNMFKEMTEKHCQPNVHTYTVLI 351

Query: 473 NCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMI-----------ALQ----------- 510
             L +  +   A ++   M+ +G IP++VTYN +I           AL+           
Sbjct: 352 CSLCEDSNFDDAKKILNGMLEKGLIPSVVTYNALIDGYCKKGLSASALEILSLMESNNCS 411

Query: 511 -------------AKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHC--GYLDEAE 555
                         + +N   A+ L   M     +P+ VTY+I++   G C  G L  A 
Sbjct: 412 PNARTYNELILGFCRGKNIHKAMSLLHKMLERKLQPNVVTYNILIH--GQCKEGDLGSAY 469

Query: 556 AVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAF 615
            + + M     VPDE  Y + +D   K G V +A   +E++ + G++ N    ++L+  +
Sbjct: 470 KLLSLMNESGLVPDEWTYSVFIDTLCKRGLVEEARSLFESLKEKGIKANEVIYSTLIDGY 529

Query: 616 LRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGFCHE 664
            +VG++SD   LL  ML+ G  P+  TY  L+            G+C E
Sbjct: 530 CKVGKVSDGRFLLDKMLSAGCVPNSITYNSLID-----------GYCKE 567



 Score =  134 bits (338), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 142/573 (24%), Positives = 240/573 (41%), Gaps = 56/573 (9%)

Query: 271 FSKPSREMKIPAGLAPFSRHFASTGNVVESVSRILRQWKWGPLAEEALGNTNYSMDAYQA 330
           FS   R    PA L    + F+   ++   +  IL +  W      +L N   S+     
Sbjct: 26  FSITHRFFTSPASLP---QSFSVEHDIPAQLFSILSRPNWQK--HPSLKNLIPSIAPSHI 80

Query: 331 NQVLKQLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGIL---GRARQFGAINKLLD--- 384
           + +     D   AL FFNW+ ++ GFKH+  ++ +M+ IL   G  R    +  L+    
Sbjct: 81  SALFALNLDPQTALAFFNWIGQKHGFKHNVQSHVSMLNILVPNGYLRIAENMRILMIKST 140

Query: 385 ----------QMVRD--------GCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGC 426
                     +M+R           +  +  YN L+    R   ++E   V+ +M     
Sbjct: 141 DSSENALFVLEMLRSMNRRVDAFKFKLTLRCYNMLLMLLSRFLMIDEMKSVYLEMLDDMV 200

Query: 427 EPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQ 486
            P+  T  T+++ + K G +  A     K+  AGLS DTFTY+ +I    +  ++ AA+ 
Sbjct: 201 TPNIFTLNTMVNGYCKLGNVVEAELYVSKIVQAGLSLDTFTYTSLILGYCRNKNVDAANA 260

Query: 487 LFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLG 546
           +F  M N+GC+ N V+Y  +I    +AR    ALKL+  M      P   TY++++  L 
Sbjct: 261 IFLSMPNKGCLRNEVSYTNLIHGFCEARRVDEALKLFSQMHEDNCWPTVRTYTVIIFALC 320

Query: 547 HCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVP 606
             G   EA  +F EM  K+  P+   Y +L+    +  N   A +    ML+ GL P+V 
Sbjct: 321 QLGRKTEALNMFKEMTEKHCQPNVHTYTVLICSLCEDSNFDDAKKILNGMLEKGLIPSVV 380

Query: 607 TCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYT-LLLSCCTEARSPYDMGFCHEL 665
           T N+L+  + + G  + A  +L  M +    P+ +TY  L+L  C        M   H++
Sbjct: 381 TYNALIDGYCKKGLSASALEILSLMESNNCSPNARTYNELILGFCRGKNIHKAMSLLHKM 440

Query: 666 MAVSGHP---AHMFLLSMPSPGPDGQNVRDHVGS---FLEMMHSEDRESKRGLVDAVVDF 719
           +     P    +  L+        GQ     +GS    L +M+              +D 
Sbjct: 441 LERKLQPNVVTYNILIH-------GQCKEGDLGSAYKLLSLMNESGLVPDEWTYSVFIDT 493

Query: 720 LHKSGLKEEAGSVWEVAAQKNVYPDAVKEKGMSYWLINLHVMSDGTAVIALSRTLAWFRK 779
           L K GL EEA S++E          ++KEKG+    +    + DG   +       +   
Sbjct: 494 LCKRGLVEEARSLFE----------SLKEKGIKANEVIYSTLIDGYCKVGKVSDGRFLLD 543

Query: 780 QMLISGVGPSRI---DIVTGWGRRSRVTGTSLV 809
           +ML +G  P+ I    ++ G+ +        L+
Sbjct: 544 KMLSAGCVPNSITYNSLIDGYCKEKNFKEARLL 576



 Score =  133 bits (334), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 82/293 (27%), Positives = 136/293 (46%)

Query: 362 TYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQM 421
           TY  ++    R +       LL +M+    QPNVVTYN LIH   +   L  A  +   M
Sbjct: 416 TYNELILGFCRGKNIHKAMSLLHKMLERKLQPNVVTYNILIHGQCKEGDLGSAYKLLSLM 475

Query: 422 QVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHL 481
              G  PD  TY   ID   K G ++ A  +++ ++  G+  +   YS +I+   K G +
Sbjct: 476 NESGLVPDEWTYSVFIDTLCKRGLVEEARSLFESLKEKGIKANEVIYSTLIDGYCKVGKV 535

Query: 482 QAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIV 541
                L  +M++ GC+PN +TYN +I    K +N++ A  L   M     EP   TY+I+
Sbjct: 536 SDGRFLLDKMLSAGCVPNSITYNSLIDGYCKEKNFKEARLLVDIMIKRDIEPAADTYTIL 595

Query: 542 MEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGL 601
           ++ L      D+A  +F +M      PD  +Y   +  +   G ++ A      M   G+
Sbjct: 596 IDNLLKDDEFDQAHDMFDQMLSTGSHPDVFIYTAFIHAYCSHGRLKDAEVLICKMNAKGI 655

Query: 602 RPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEAR 654
            P+       + A+ R G +  A+ +L+ M  +G +PS  TY+ L+   + A+
Sbjct: 656 MPDTMLYTLFIDAYGRFGSIDGAFGILKRMHEVGCEPSYYTYSCLIKHLSNAK 708



 Score =  128 bits (321), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 88/324 (27%), Positives = 152/324 (46%), Gaps = 6/324 (1%)

Query: 334 LKQLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQP 393
           L QL   T AL  F  +  +   + + HTYT ++  L     F    K+L+ M+  G  P
Sbjct: 319 LCQLGRKTEALNMFKEMTEKHC-QPNVHTYTVLICSLCEDSNFDDAKKILNGMLEKGLIP 377

Query: 394 NVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMY 453
           +VVTYN LI  Y +      AL++   M+   C P+  TY  LI    +   +  AM + 
Sbjct: 378 SVVTYNALIDGYCKKGLSASALEILSLMESNNCSPNARTYNELILGFCRGKNIHKAMSLL 437

Query: 454 KKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKA 513
            KM    L P+  TY+++I+   K G L +A++L   M   G +P+  TY++ I    K 
Sbjct: 438 HKMLERKLQPNVVTYNILIHGQCKEGDLGSAYKLLSLMNESGLVPDEWTYSVFIDTLCKR 497

Query: 514 RNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHC--GYLDEAEAVFAEMRRKNWVPDEP 571
              + A  L+  ++  G + ++V YS +++  G+C  G + +   +  +M     VP+  
Sbjct: 498 GLVEEARSLFESLKEKGIKANEVIYSTLID--GYCKVGKVSDGRFLLDKMLSAGCVPNSI 555

Query: 572 VYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGM 631
            Y  L+D + K  N ++A    + M++  + P   T   L+   L+  +   A+ +   M
Sbjct: 556 TYNSLIDGYCKEKNFKEARLLVDIMIKRDIEPAADTYTILIDNLLKDDEFDQAHDMFDQM 615

Query: 632 LNLGLKPSLQTYTLLL-SCCTEAR 654
           L+ G  P +  YT  + + C+  R
Sbjct: 616 LSTGSHPDVFIYTAFIHAYCSHGR 639



 Score =  116 bits (290), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 102/398 (25%), Positives = 164/398 (41%), Gaps = 34/398 (8%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           ++ G K +E  Y+T++    +  +      LLD+M+  GC PN +TYN LI  Y +    
Sbjct: 511 KEKGIKANEVIYSTLIDGYCKVGKVSDGRFLLDKMLSAGCVPNSITYNSLIDGYCKEKNF 570

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
            EA  +   M     EP   TY  LID   K    D A DM+ +M + G  PD F Y+  
Sbjct: 571 KEARLLVDIMIKRDIEPAADTYTILIDNLLKDDEFDQAHDMFDQMLSTGSHPDVFIYTAF 630

Query: 472 INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF 531
           I+     G L+ A  L C+M  +G +P+ + Y + I    +  +   A  + + M   G 
Sbjct: 631 IHAYCSHGRLKDAEVLICKMNAKGIMPDTMLYTLFIDAYGRFGSIDGAFGILKRMHEVGC 690

Query: 532 EPDKVTYSIVM---------EVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGK 582
           EP   TYS ++         EV       D +  V +      W   +  Y   +DL+GK
Sbjct: 691 EPSYYTYSCLIKHLSNAKPKEVSSSSELSDLSSGVASNDFSNCWRRVD--YEFTLDLFGK 748

Query: 583 AGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQT 642
                        M + G  PN  T    ++   +VG L  A+ L   M   G  P+   
Sbjct: 749 -------------MAEHGCAPNANTYGKFITGLCKVGCLEVAHRLFDHMKEKGQSPNEDI 795

Query: 643 YTLLLSCCTEARSPYDMGFCHELMAVSGHPAH-----MFLLSMPSPGPDGQNVRDHVGSF 697
           Y  LL C  +     +     ++M  + H  H     + L  +   G D +  R    SF
Sbjct: 796 YNSLLGCSCQLGLYGEAIRWLDIMIENRHLPHLDSCKLLLCGLYDEGNDEKAKRVFC-SF 854

Query: 698 LEMMHSEDRESKRGLVDAVVDFLHKSGLKEEAGSVWEV 735
           L+  ++ D    + L+D ++    K GL ++   ++ +
Sbjct: 855 LQCEYNYDEMVWKVLIDGLL----KKGLSDKCSDLFGI 888



 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 56/257 (21%), Positives = 105/257 (40%), Gaps = 37/257 (14%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINK---LLDQMVRDGCQPNVVTYNRLI--------- 402
           G   D   YT  +   GR   FG+I+    +L +M   GC+P+  TY+ LI         
Sbjct: 654 GIMPDTMLYTLFIDAYGR---FGSIDGAFGILKRMHEVGCEPSYYTYSCLIKHLSNAKPK 710

Query: 403 ---------------------HSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHA 441
                                + + R +Y    LD+F +M   GC P+  TY   I    
Sbjct: 711 EVSSSSELSDLSSGVASNDFSNCWRRVDY-EFTLDLFGKMAEHGCAPNANTYGKFITGLC 769

Query: 442 KAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLV 501
           K G L+VA  ++  M+  G SP+   Y+ ++ C  + G    A +    M+    +P+L 
Sbjct: 770 KVGCLEVAHRLFDHMKEKGQSPNEDIYNSLLGCSCQLGLYGEAIRWLDIMIENRHLPHLD 829

Query: 502 TYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEM 561
           +  +++       N + A +++       +  D++ + ++++ L   G  D+   +F  M
Sbjct: 830 SCKLLLCGLYDEGNDEKAKRVFCSFLQCEYNYDEMVWKVLIDGLLKKGLSDKCSDLFGIM 889

Query: 562 RRKNWVPDEPVYGLLVD 578
             +        Y +L++
Sbjct: 890 ETQGCQIHPKTYSMLIE 906


>gi|302768873|ref|XP_002967856.1| hypothetical protein SELMODRAFT_169254 [Selaginella moellendorffii]
 gi|300164594|gb|EFJ31203.1| hypothetical protein SELMODRAFT_169254 [Selaginella moellendorffii]
          Length = 731

 Score =  147 bits (370), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 93/330 (28%), Positives = 169/330 (51%), Gaps = 19/330 (5%)

Query: 339 DHTVALGFFNWLRRQAGFKHDEHTYTTMVG---------ILGRARQFGAI----NKLLDQ 385
           D   A G F  L+R AGFK D   YTT++          ++ +AR  G I    N +L Q
Sbjct: 79  DMNGAFGAFAALKR-AGFKPDCMIYTTLISTCSKALKTDLVFQARNPGPILHWTNSVLAQ 137

Query: 386 MVRD----GCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHA 441
           + R+    G + N++TY  +I    R   L +A  +++ M     +PDRV + +LI+   
Sbjct: 138 VYREMESVGVEANLLTYGAIIDGCARTGELAKAFGIYRIMLSKKIKPDRVIFNSLINACG 197

Query: 442 KAGFLDVAMDMYKKMQAAG-LSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNL 500
           ++G +  A +++ ++++   ++P+  T   +I+   KAG   +A++++  M  +G     
Sbjct: 198 RSGAVKRAFEVFTELKSENPINPNHVTMCSLIDACSKAGDGDSAYEVYTMMRKRGIGGCP 257

Query: 501 VTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAE 560
             Y   +   + + N + A  +Y DM+  G +PD++ +S +++V GH   +D A  V  E
Sbjct: 258 EPYTAAVHACSSSGNLERAFSIYDDMKKDGVKPDEIFFSALIDVAGHASKIDCAFDVLQE 317

Query: 561 MRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQ 620
           + + + VP   ++  L+ +    GN  KA   YE +   G+RP+V T N+L++A  R  Q
Sbjct: 318 VEKYSLVPGPVIFSSLMGVCSNTGNWEKAIFLYENIQAVGIRPSVSTLNALMTALCRGKQ 377

Query: 621 LSDAYHLLQGMLNLGLKPSLQTYTLLLSCC 650
             +A   L+ +   G+ P+  TY++LL  C
Sbjct: 378 FQNALQSLEELKEAGVSPNQLTYSILLEAC 407



 Score = 79.3 bits (194), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 64/281 (22%), Positives = 120/281 (42%), Gaps = 22/281 (7%)

Query: 350 LRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRAN 409
           + R+ G       YT  V     +        + D M +DG +P+ + ++ LI   G A+
Sbjct: 247 MMRKRGIGGCPEPYTAAVHACSSSGNLERAFSIYDDMKKDGVKPDEIFFSALIDVAGHAS 306

Query: 410 YLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYS 469
            ++ A DV ++++     P  V + +L+ + +  G  + A+ +Y+ +QA G+ P   T +
Sbjct: 307 KIDCAFDVLQEVEKYSLVPGPVIFSSLMGVCSNTGNWEKAIFLYENIQAVGIRPSVSTLN 366

Query: 470 VIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNA 529
            ++  L +    Q A Q   E+   G  PN +TY+I++    K      AL LY      
Sbjct: 367 ALMTALCRGKQFQNALQSLEELKEAGVSPNQLTYSILLEACEKENEAGIALNLY------ 420

Query: 530 GFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKA 589
                  T++I   ++ +    D    +  E  R +  P + +   +  LW    N +  
Sbjct: 421 -------THAIADGIVPNLAMCDNIIGICLEGIRSSIGPPK-LASSVNPLWMVDDNQKPH 472

Query: 590 WEW-------YEAMLQAGLRPNVPTCNSLLSAFLRVGQLSD 623
            +W       +   L  G +P +P  + LL A LR+ + S+
Sbjct: 473 GQWLSWALACFRQTLSGGAQPTLPVLSRLL-ACLRIPESSE 512



 Score = 40.8 bits (94), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 37/155 (23%), Positives = 58/155 (37%), Gaps = 20/155 (12%)

Query: 594 EAMLQAGL--RPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCT 651
           EA    GL   P + T N LLS     G ++ A+     +   G KP    YT L+S C+
Sbjct: 51  EAFRYTGLIKSPTLSTYNMLLSVCCNAGDMNGAFGAFAALKRAGFKPDCMIYTTLISTCS 110

Query: 652 EARSPYDMGFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRESKRG 711
           +A    D+ F                    +PGP        +      M S   E+   
Sbjct: 111 KALK-TDLVF-----------------QARNPGPILHWTNSVLAQVYREMESVGVEANLL 152

Query: 712 LVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAV 746
              A++D   ++G   +A  ++ +   K + PD V
Sbjct: 153 TYGAIIDGCARTGELAKAFGIYRIMLSKKIKPDRV 187


>gi|449527556|ref|XP_004170776.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Cucumis sativus]
          Length = 665

 Score =  147 bits (370), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 88/298 (29%), Positives = 150/298 (50%), Gaps = 2/298 (0%)

Query: 352 RQAGFKHDEHTYTTMV-GILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANY 410
           R  G K D  TY  ++ GI    R   AI + L+ M   GCQPNV+T+N ++ S      
Sbjct: 274 RDKGCKPDVVTYNVLINGICKEGRLDEAI-RFLNHMPSYGCQPNVITHNIILRSMCSTGR 332

Query: 411 LNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSV 470
             +A     +M   GC P  VT+  LI+   + G +  A+D+ +KM   G +P++ +Y+ 
Sbjct: 333 WMDAEKFLAEMIRKGCSPSVVTFNILINFLCRKGLIGRAIDVLEKMPQHGCTPNSLSYNP 392

Query: 471 IINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAG 530
           +++ L K   ++ A +    MV++GC P++VTYN ++    K      A+++   + + G
Sbjct: 393 LLHALCKDKKMERAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLGSKG 452

Query: 531 FEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAW 590
             P  +TY+ V++ L   G  D+A  +  EM+ K   PD   Y  LV    + G V +A 
Sbjct: 453 CSPVLITYNTVIDGLSKVGKTDDAIKLLDEMKGKGLKPDIITYSTLVGGLSREGKVDEAI 512

Query: 591 EWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
            ++  + + G++PN  T NS++    +  Q   A   L  M+  G KP+  +Y +L+ 
Sbjct: 513 AFFHDLEEMGVKPNAITYNSIMLGLCKARQTVRAIDFLAYMVARGCKPTETSYMILIE 570



 Score =  141 bits (355), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 89/321 (27%), Positives = 155/321 (48%), Gaps = 17/321 (5%)

Query: 327 AYQANQVLKQLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQM 386
            ++A +V++ L+D              +G   D  TY  ++    +  + G+  +LLD+M
Sbjct: 161 TWKATRVMEILED--------------SGAVPDVITYNVLISGYCKTGEIGSALQLLDRM 206

Query: 387 VRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFL 446
                 P+VVTYN ++ +   +  L EA++V  +     C PD +TY  LI+   K   +
Sbjct: 207 ---SVSPDVVTYNTILRTLCDSGKLKEAMEVLDRQMQRECYPDVITYTILIEATCKESGV 263

Query: 447 DVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIM 506
             AM +  +M+  G  PD  TY+V+IN + K G L  A +    M + GC PN++T+NI+
Sbjct: 264 GQAMKLLDEMRDKGCKPDVVTYNVLINGICKEGRLDEAIRFLNHMPSYGCQPNVITHNII 323

Query: 507 IALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNW 566
           +        +  A K   +M   G  P  VT++I++  L   G +  A  V  +M +   
Sbjct: 324 LRSMCSTGRWMDAEKFLAEMIRKGCSPSVVTFNILINFLCRKGLIGRAIDVLEKMPQHGC 383

Query: 567 VPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYH 626
            P+   Y  L+    K   + +A E+ + M+  G  P++ T N+LL+A  + G++  A  
Sbjct: 384 TPNSLSYNPLLHALCKDKKMERAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVE 443

Query: 627 LLQGMLNLGLKPSLQTYTLLL 647
           +L  + + G  P L TY  ++
Sbjct: 444 ILNQLGSKGCSPVLITYNTVI 464



 Score =  137 bits (346), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 95/367 (25%), Positives = 170/367 (46%), Gaps = 5/367 (1%)

Query: 381 KLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIH 440
           ++++ +   G  P+V+TYN LI  Y +   +  AL +  +M V    PD VTY T++   
Sbjct: 166 RVMEILEDSGAVPDVITYNVLISGYCKTGEIGSALQLLDRMSV---SPDVVTYNTILRTL 222

Query: 441 AKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNL 500
             +G L  AM++  +       PD  TY+++I    K   +  A +L  EM ++GC P++
Sbjct: 223 CDSGKLKEAMEVLDRQMQRECYPDVITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDV 282

Query: 501 VTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAE 560
           VTYN++I    K      A++    M + G +P+ +T++I++  +   G   +AE   AE
Sbjct: 283 VTYNVLINGICKEGRLDEAIRFLNHMPSYGCQPNVITHNIILRSMCSTGRWMDAEKFLAE 342

Query: 561 MRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQ 620
           M RK   P    + +L++   + G + +A +  E M Q G  PN  + N LL A  +  +
Sbjct: 343 MIRKGCSPSVVTFNILINFLCRKGLIGRAIDVLEKMPQHGCTPNSLSYNPLLHALCKDKK 402

Query: 621 LSDAYHLLQGMLNLGLKPSLQTY-TLLLSCCTEARSPYDMGFCHELMAVSGHPAHMFLLS 679
           +  A   L  M++ G  P + TY TLL + C + +    +   ++L +    P  +   +
Sbjct: 403 MERAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLGSKGCSPV-LITYN 461

Query: 680 MPSPGPDGQNVRDHVGSFLEMMHSEDRESKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQK 739
               G       D     L+ M  +  +        +V  L + G  +EA + +    + 
Sbjct: 462 TVIDGLSKVGKTDDAIKLLDEMKGKGLKPDIITYSTLVGGLSREGKVDEAIAFFHDLEEM 521

Query: 740 NVYPDAV 746
            V P+A+
Sbjct: 522 GVKPNAI 528



 Score =  129 bits (323), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 75/256 (29%), Positives = 130/256 (50%)

Query: 381 KLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIH 440
           K L +M+R GC P+VVT+N LI+   R   +  A+DV ++M   GC P+ ++Y  L+   
Sbjct: 338 KFLAEMIRKGCSPSVVTFNILINFLCRKGLIGRAIDVLEKMPQHGCTPNSLSYNPLLHAL 397

Query: 441 AKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNL 500
            K   ++ A++    M + G  PD  TY+ ++  L K G +  A ++  ++ ++GC P L
Sbjct: 398 CKDKKMERAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLGSKGCSPVL 457

Query: 501 VTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAE 560
           +TYN +I   +K      A+KL  +M+  G +PD +TYS ++  L   G +DEA A F +
Sbjct: 458 ITYNTVIDGLSKVGKTDDAIKLLDEMKGKGLKPDIITYSTLVGGLSREGKVDEAIAFFHD 517

Query: 561 MRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQ 620
           +      P+   Y  ++    KA    +A ++   M+  G +P   +   L+      G 
Sbjct: 518 LEEMGVKPNAITYNSIMLGLCKARQTVRAIDFLAYMVARGCKPTETSYMILIEGLAYEGL 577

Query: 621 LSDAYHLLQGMLNLGL 636
             +A  LL  + + G+
Sbjct: 578 AKEALELLNELCSRGV 593



 Score =  121 bits (304), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 68/242 (28%), Positives = 122/242 (50%), Gaps = 4/242 (1%)

Query: 362 TYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQM 421
           T+  ++  L R    G    +L++M + GC PN ++YN L+H+  +   +  A++    M
Sbjct: 354 TFNILINFLCRKGLIGRAIDVLEKMPQHGCTPNSLSYNPLLHALCKDKKMERAIEYLDIM 413

Query: 422 QVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHL 481
              GC PD VTY TL+    K G +DVA+++  ++ + G SP   TY+ +I+ L K G  
Sbjct: 414 VSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLGSKGCSPVLITYNTVIDGLSKVGKT 473

Query: 482 QAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIV 541
             A +L  EM  +G  P+++TY+ ++   ++      A+  + D++  G +P+ +TY+ +
Sbjct: 474 DDAIKLLDEMKGKGLKPDIITYSTLVGGLSREGKVDEAIAFFHDLEEMGVKPNAITYNSI 533

Query: 542 MEVLGHCGYLDEAEAV--FAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQA 599
           M  LG C       A+   A M  +   P E  Y +L++     G  ++A E    +   
Sbjct: 534 M--LGLCKARQTVRAIDFLAYMVARGCKPTETSYMILIEGLAYEGLAKEALELLNELCSR 591

Query: 600 GL 601
           G+
Sbjct: 592 GV 593



 Score =  111 bits (278), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 63/209 (30%), Positives = 107/209 (51%)

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
           Q G   +  +Y  ++  L + ++     + LD MV  GC P++VTYN L+ +  +   ++
Sbjct: 380 QHGCTPNSLSYNPLLHALCKDKKMERAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVD 439

Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
            A+++  Q+   GC P  +TY T+ID  +K G  D A+ +  +M+  GL PD  TYS ++
Sbjct: 440 VAVEILNQLGSKGCSPVLITYNTVIDGLSKVGKTDDAIKLLDEMKGKGLKPDIITYSTLV 499

Query: 473 NCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFE 532
             L + G +  A   F ++   G  PN +TYN ++    KAR    A+     M   G +
Sbjct: 500 GGLSREGKVDEAIAFFHDLEEMGVKPNAITYNSIMLGLCKARQTVRAIDFLAYMVARGCK 559

Query: 533 PDKVTYSIVMEVLGHCGYLDEAEAVFAEM 561
           P + +Y I++E L + G   EA  +  E+
Sbjct: 560 PTETSYMILIEGLAYEGLAKEALELLNEL 588



 Score = 98.6 bits (244), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 71/243 (29%), Positives = 116/243 (47%), Gaps = 5/243 (2%)

Query: 407 RANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTF 466
           R   L E     + M   G  PD +   +LI    K G    A  + + ++ +G  PD  
Sbjct: 122 RNGELEEGFKFLEDMVCRGDIPDIIACTSLIRGLCKTGKTWKATRVMEILEDSGAVPDVI 181

Query: 467 TYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALK-LYRD 525
           TY+V+I+   K G + +A QL   M      P++VTYN ++     +   + A++ L R 
Sbjct: 182 TYNVLISGYCKTGEIGSALQLLDRM---SVSPDVVTYNTILRTLCDSGKLKEAMEVLDRQ 238

Query: 526 MQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGN 585
           MQ   + PD +TY+I++E       + +A  +  EMR K   PD   Y +L++   K G 
Sbjct: 239 MQRECY-PDVITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTYNVLINGICKEGR 297

Query: 586 VRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTL 645
           + +A  +   M   G +PNV T N +L +    G+  DA   L  M+  G  PS+ T+ +
Sbjct: 298 LDEAIRFLNHMPSYGCQPNVITHNIILRSMCSTGRWMDAEKFLAEMIRKGCSPSVVTFNI 357

Query: 646 LLS 648
           L++
Sbjct: 358 LIN 360



 Score = 94.0 bits (232), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 60/215 (27%), Positives = 103/215 (47%), Gaps = 4/215 (1%)

Query: 441 AKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNL 500
            + G L+      + M   G  PD    + +I  L K G    A ++   + + G +P++
Sbjct: 121 VRNGELEEGFKFLEDMVCRGDIPDIIACTSLIRGLCKTGKTWKATRVMEILEDSGAVPDV 180

Query: 501 VTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAE 560
           +TYN++I+   K     SAL+L   M      PD VTY+ ++  L   G L EA  V   
Sbjct: 181 ITYNVLISGYCKTGEIGSALQLLDRMS---VSPDVVTYNTILRTLCDSGKLKEAMEVLDR 237

Query: 561 MRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQ 620
             ++   PD   Y +L++   K   V +A +  + M   G +P+V T N L++   + G+
Sbjct: 238 QMQRECYPDVITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTYNVLINGICKEGR 297

Query: 621 LSDAYHLLQGMLNLGLKPSLQTYTLLL-SCCTEAR 654
           L +A   L  M + G +P++ T+ ++L S C+  R
Sbjct: 298 LDEAIRFLNHMPSYGCQPNVITHNIILRSMCSTGR 332



 Score = 84.0 bits (206), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 49/186 (26%), Positives = 93/186 (50%)

Query: 359 DEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVF 418
           D  TY T++  L +  +     ++L+Q+   GC P ++TYN +I    +    ++A+ + 
Sbjct: 421 DIVTYNTLLTALCKDGKVDVAVEILNQLGSKGCSPVLITYNTVIDGLSKVGKTDDAIKLL 480

Query: 419 KQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKA 478
            +M+  G +PD +TY TL+   ++ G +D A+  +  ++  G+ P+  TY+ I+  L KA
Sbjct: 481 DEMKGKGLKPDIITYSTLVGGLSREGKVDEAIAFFHDLEEMGVKPNAITYNSIMLGLCKA 540

Query: 479 GHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTY 538
                A      MV +GC P   +Y I+I   A     + AL+L  ++ + G        
Sbjct: 541 RQTVRAIDFLAYMVARGCKPTETSYMILIEGLAYEGLAKEALELLNELCSRGVVKKSSAE 600

Query: 539 SIVMEV 544
            +V+++
Sbjct: 601 QVVVKI 606



 Score = 54.3 bits (129), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 31/121 (25%), Positives = 55/121 (45%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           +  G K D  TY+T+VG L R  +          +   G +PN +TYN ++    +A   
Sbjct: 484 KGKGLKPDIITYSTLVGGLSREGKVDEAIAFFHDLEEMGVKPNAITYNSIMLGLCKARQT 543

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
             A+D    M   GC+P   +Y  LI+  A  G    A+++  ++ + G+   +    V+
Sbjct: 544 VRAIDFLAYMVARGCKPTETSYMILIEGLAYEGLAKEALELLNELCSRGVVKKSSAEQVV 603

Query: 472 I 472
           +
Sbjct: 604 V 604


>gi|255553476|ref|XP_002517779.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223543051|gb|EEF44586.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 486

 Score =  147 bits (370), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 83/293 (28%), Positives = 148/293 (50%), Gaps = 2/293 (0%)

Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLI 402
           AL  F  LR+Q  ++    TYT ++ +LG+ RQ      L + M  +G +P +  Y  L+
Sbjct: 111 ALKIFELLRKQHWYEPRCQTYTKLLMMLGKCRQPEEARLLFEVMQTEGLRPTIDVYTALV 170

Query: 403 HSYGRANYLNEALDVFKQMQVVG-CEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGL 461
            +YG +  L +A     +M+ V  C+PD  TY  LI+I  K    D+   +  +M   G+
Sbjct: 171 SAYGESGLLAKAFSTVDEMKSVSDCKPDVYTYSVLINICTKLHRFDLIGRILSEMSYLGV 230

Query: 462 SPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQG-CIPNLVTYNIMIALQAKARNYQSAL 520
              T T++ IIN  GKA   +        M+  G  +P+L T+N +I     +   +   
Sbjct: 231 ECSTVTFNTIINGYGKAKMFREMENSLTNMIEIGNSVPDLFTFNSVIGAYGNSGRIEKME 290

Query: 521 KLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLW 580
           K Y + Q  G  PD  T++I+++  G  G  ++  +V   M+++ + P    Y ++++ +
Sbjct: 291 KWYNEFQLMGISPDIKTFNILIKSYGKAGMYEKINSVIEFMKKRFFPPTVVTYNIIIETF 350

Query: 581 GKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLN 633
           G+AG++    E+++ M   G++PN  T  SL+SA+ + G L     +L+ + N
Sbjct: 351 GRAGDIENMDEYFKTMKHLGMKPNAITYCSLVSAYSKAGLLMKVNSILRQVEN 403



 Score =  124 bits (311), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 70/277 (25%), Positives = 141/277 (50%), Gaps = 1/277 (0%)

Query: 357 KHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALD 416
           K D +TY+ ++ I  +  +F  I ++L +M   G + + VT+N +I+ YG+A    E  +
Sbjct: 196 KPDVYTYSVLINICTKLHRFDLIGRILSEMSYLGVECSTVTFNTIINGYGKAKMFREMEN 255

Query: 417 VFKQMQVVGCE-PDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCL 475
               M  +G   PD  T+ ++I  +  +G ++     Y + Q  G+SPD  T++++I   
Sbjct: 256 SLTNMIEIGNSVPDLFTFNSVIGAYGNSGRIEKMEKWYNEFQLMGISPDIKTFNILIKSY 315

Query: 476 GKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDK 535
           GKAG  +  + +   M  +   P +VTYNI+I    +A + ++  + ++ M++ G +P+ 
Sbjct: 316 GKAGMYEKINSVIEFMKKRFFPPTVVTYNIIIETFGRAGDIENMDEYFKTMKHLGMKPNA 375

Query: 536 VTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEA 595
           +TY  ++      G L +  ++  ++   + V D   +  +++ +G+AG+V K  E +  
Sbjct: 376 ITYCSLVSAYSKAGLLMKVNSILRQVENSDVVLDTTFFNCIINAYGQAGDVDKMAELFLE 435

Query: 596 MLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGML 632
           M +    P+  T  +++ A+   G    A  L + ML
Sbjct: 436 MRERECMPDNVTFATMIQAYRGQGMTEAAQALEKMML 472



 Score =  110 bits (274), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 75/271 (27%), Positives = 126/271 (46%), Gaps = 16/271 (5%)

Query: 392 QPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMD 451
           +P   TY +L+   G+     EA  +F+ MQ  G  P    Y  L+  + ++G L  A  
Sbjct: 125 EPRCQTYTKLLMMLGKCRQPEEARLLFEVMQTEGLRPTIDVYTALVSAYGESGLLAKAFS 184

Query: 452 MYKKMQA-AGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQ 510
              +M++ +   PD +TYSV+IN   K        ++  EM   G   + VT+N +I   
Sbjct: 185 TVDEMKSVSDCKPDVYTYSVLINICTKLHRFDLIGRILSEMSYLGVECSTVTFNTIINGY 244

Query: 511 AKARNYQSALKLYRDMQNA--------GFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMR 562
            KA       K++R+M+N+           PD  T++ V+   G+ G +++ E  + E +
Sbjct: 245 GKA-------KMFREMENSLTNMIEIGNSVPDLFTFNSVIGAYGNSGRIEKMEKWYNEFQ 297

Query: 563 RKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLS 622
                PD   + +L+  +GKAG   K     E M +    P V T N ++  F R G + 
Sbjct: 298 LMGISPDIKTFNILIKSYGKAGMYEKINSVIEFMKKRFFPPTVVTYNIIIETFGRAGDIE 357

Query: 623 DAYHLLQGMLNLGLKPSLQTYTLLLSCCTEA 653
           +     + M +LG+KP+  TY  L+S  ++A
Sbjct: 358 NMDEYFKTMKHLGMKPNAITYCSLVSAYSKA 388



 Score =  105 bits (263), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 59/239 (24%), Positives = 114/239 (47%), Gaps = 1/239 (0%)

Query: 362 TYTTMVGILGRARQFGAINKLLDQMVRDG-CQPNVVTYNRLIHSYGRANYLNEALDVFKQ 420
           T+ T++   G+A+ F  +   L  M+  G   P++ T+N +I +YG +  + +    + +
Sbjct: 236 TFNTIINGYGKAKMFREMENSLTNMIEIGNSVPDLFTFNSVIGAYGNSGRIEKMEKWYNE 295

Query: 421 MQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGH 480
            Q++G  PD  T+  LI  + KAG  +    + + M+     P   TY++II   G+AG 
Sbjct: 296 FQLMGISPDIKTFNILIKSYGKAGMYEKINSVIEFMKKRFFPPTVVTYNIIIETFGRAGD 355

Query: 481 LQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSI 540
           ++   + F  M + G  PN +TY  +++  +KA        + R ++N+    D   ++ 
Sbjct: 356 IENMDEYFKTMKHLGMKPNAITYCSLVSAYSKAGLLMKVNSILRQVENSDVVLDTTFFNC 415

Query: 541 VMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQA 599
           ++   G  G +D+   +F EMR +  +PD   +  ++  +   G    A    + ML A
Sbjct: 416 IINAYGQAGDVDKMAELFLEMRERECMPDNVTFATMIQAYRGQGMTEAAQALEKMMLAA 474



 Score =  101 bits (251), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 49/153 (32%), Positives = 88/153 (57%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           G   D  T+  ++   G+A  +  IN +++ M +    P VVTYN +I ++GRA  +   
Sbjct: 300 GISPDIKTFNILIKSYGKAGMYEKINSVIEFMKKRFFPPTVVTYNIIIETFGRAGDIENM 359

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
            + FK M+ +G +P+ +TYC+L+  ++KAG L     + ++++ + +  DT  ++ IIN 
Sbjct: 360 DEYFKTMKHLGMKPNAITYCSLVSAYSKAGLLMKVNSILRQVENSDVVLDTTFFNCIINA 419

Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMI 507
            G+AG +    +LF EM  + C+P+ VT+  MI
Sbjct: 420 YGQAGDVDKMAELFLEMRERECMPDNVTFATMI 452



 Score = 53.9 bits (128), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 29/108 (26%), Positives = 55/108 (50%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           +  G K +  TY ++V    +A     +N +L Q+       +   +N +I++YG+A  +
Sbjct: 367 KHLGMKPNAITYCSLVSAYSKAGLLMKVNSILRQVENSDVVLDTTFFNCIINAYGQAGDV 426

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAA 459
           ++  ++F +M+   C PD VT+ T+I  +   G  + A  + K M AA
Sbjct: 427 DKMAELFLEMRERECMPDNVTFATMIQAYRGQGMTEAAQALEKMMLAA 474


>gi|30688764|ref|NP_850356.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75158748|sp|Q8RWS8.1|PP199_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At2g41720; AltName: Full=Protein EMBRYO DEFECTIVE 2654
 gi|20268762|gb|AAM14084.1| putative salt-inducible protein [Arabidopsis thaliana]
 gi|21436141|gb|AAM51317.1| putative salt-inducible protein [Arabidopsis thaliana]
 gi|330254931|gb|AEC10025.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 822

 Score =  147 bits (370), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 98/364 (26%), Positives = 170/364 (46%), Gaps = 38/364 (10%)

Query: 385 QMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAG 444
           ++ ++ C  N + YN +I  + R N++++A  +F +MQ   C+PD  TY  LI+ H +AG
Sbjct: 134 KIQKNYCARNDI-YNMMIRLHARHNWVDQARGLFFEMQKWSCKPDAETYDALINAHGRAG 192

Query: 445 FLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYN 504
               AM++   M  A ++P   TY+ +IN  G +G+ + A ++  +M + G  P+LVT+N
Sbjct: 193 QWRWAMNLMDDMLRAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHN 252

Query: 505 IMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMR-- 562
           I+++     R Y  AL  +  M+ A   PD  T++I++  L   G   +A  +F  MR  
Sbjct: 253 IVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREK 312

Query: 563 RKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLS 622
           R    PD   +  ++ L+   G +      +EAM+  GL+PN+ + N+L+ A+   G   
Sbjct: 313 RAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSG 372

Query: 623 DAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGFCHELMAVSGHPAHMFLLSMPS 682
            A  +L  +   G+ P + +YT LL+    +R P             G    +FL     
Sbjct: 373 TALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQP-------------GKAKEVFL----- 414

Query: 683 PGPDGQNVRDHVGSFLEMMHSEDRESKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVY 742
                            MM  E R+      +A++D    +G   EA  ++    Q  + 
Sbjct: 415 -----------------MMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIK 457

Query: 743 PDAV 746
           P+ V
Sbjct: 458 PNVV 461



 Score =  141 bits (355), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 90/318 (28%), Positives = 160/318 (50%), Gaps = 11/318 (3%)

Query: 348 NWLRRQAGF---------KHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTY 398
           NW+ +  G          K D  TY  ++   GRA Q+     L+D M+R    P+  TY
Sbjct: 157 NWVDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDMLRAAIAPSRSTY 216

Query: 399 NRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQA 458
           N LI++ G +    EAL+V K+M   G  PD VT+  ++  +        A+  ++ M+ 
Sbjct: 217 NNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKG 276

Query: 459 AGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQ--GCIPNLVTYNIMIALQAKARNY 516
           A + PDT T+++II CL K G    A  LF  M  +   C P++VT+  ++ L +     
Sbjct: 277 AKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEI 336

Query: 517 QSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLL 576
           ++   ++  M   G +P+ V+Y+ +M      G    A +V  ++++   +PD   Y  L
Sbjct: 337 ENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCL 396

Query: 577 VDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGL 636
           ++ +G++    KA E +  M +   +PNV T N+L+ A+   G L++A  + + M   G+
Sbjct: 397 LNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGI 456

Query: 637 KPSLQTYTLLLSCCTEAR 654
           KP++ +   LL+ C+ ++
Sbjct: 457 KPNVVSVCTLLAACSRSK 474



 Score =  109 bits (272), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 93/402 (23%), Positives = 162/402 (40%), Gaps = 105/402 (26%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           +Q G   D  +YT ++   GR+RQ G   ++   M ++  +PNVVTYN LI +YG   +L
Sbjct: 382 KQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFL 441

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTL----------------------------------- 436
            EA+++F+QM+  G +P+ V+ CTL                                   
Sbjct: 442 AEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSA 501

Query: 437 IDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIIN----------------------- 473
           I  +  A  L+ A+ +Y+ M+   +  D+ T++++I+                       
Sbjct: 502 IGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEMEDLSI 561

Query: 474 ------------CLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALK 521
                          K G +  A  +F +M   GC P+++ Y  M+     +  +  A +
Sbjct: 562 PLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHAYNASEKWGKACE 621

Query: 522 LYRDMQNAGFEPDKVTYSIVMEVLGHCG----------YLDEAE-----AVFAEM----- 561
           L+ +M+  G EPD +  S +M      G           + E E     AVF E+     
Sbjct: 622 LFLEMEANGIEPDSIACSALMRAFNKGGQPSNVFVLMDLMREKEIPFTGAVFFEIFSACN 681

Query: 562 RRKNWV----------PDEPVYGL-----LVDLWGKAGNVRKAWEWYEAMLQAGLRPNVP 606
             + W           P  P   +     ++ L+GK+G V    + +  ++ +G+  N+ 
Sbjct: 682 TLQEWKRAIDLIQMMDPYLPSLSIGLTNQMLHLFGKSGKVEAMMKLFYKIIASGVGINLK 741

Query: 607 TCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
           T   LL   L VG       +L+ M   G++PS Q Y  ++S
Sbjct: 742 TYAILLEHLLAVGNWRKYIEVLEWMSGAGIQPSNQMYRDIIS 783



 Score =  107 bits (266), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 79/331 (23%), Positives = 145/331 (43%), Gaps = 35/331 (10%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           G K +  +Y  ++G        G    +L  + ++G  P+VV+Y  L++SYGR+    +A
Sbjct: 350 GLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKA 409

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSP----------- 463
            +VF  M+    +P+ VTY  LID +   GFL  A++++++M+  G+ P           
Sbjct: 410 KEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAA 469

Query: 464 ------------------------DTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPN 499
                                   +T  Y+  I     A  L+ A  L+  M  +    +
Sbjct: 470 CSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKAD 529

Query: 500 LVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFA 559
            VT+ I+I+   +   Y  A+   ++M++      K  YS V+      G + EAE++F 
Sbjct: 530 SVTFTILISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFN 589

Query: 560 EMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVG 619
           +M+     PD   Y  ++  +  +    KA E +  M   G+ P+   C++L+ AF + G
Sbjct: 590 QMKMAGCEPDVIAYTSMLHAYNASEKWGKACELFLEMEANGIEPDSIACSALMRAFNKGG 649

Query: 620 QLSDAYHLLQGMLNLGLKPSLQTYTLLLSCC 650
           Q S+ + L+  M    +  +   +  + S C
Sbjct: 650 QPSNVFVLMDLMREKEIPFTGAVFFEIFSAC 680



 Score =  102 bits (253), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 74/332 (22%), Positives = 150/332 (45%), Gaps = 9/332 (2%)

Query: 335 KQLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQM--VRDGCQ 392
           K  + ++ AL +F  L + A  + D  T+  ++  L +  Q      L + M   R  C+
Sbjct: 259 KSGRQYSKALSYFE-LMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECR 317

Query: 393 PNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDM 452
           P+VVT+  ++H Y     +     VF+ M   G +P+ V+Y  L+  +A  G    A+ +
Sbjct: 318 PDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSV 377

Query: 453 YKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAK 512
              ++  G+ PD  +Y+ ++N  G++     A ++F  M  +   PN+VTYN +I     
Sbjct: 378 LGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGS 437

Query: 513 ARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPV 572
                 A++++R M+  G +P+ V+   ++            + V +  + +    +   
Sbjct: 438 NGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAA 497

Query: 573 YGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGML 632
           Y   +  +  A  + KA   Y++M +  ++ +  T   L+S   R+ +  +A   L+ M 
Sbjct: 498 YNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEME 557

Query: 633 NLGLKPSLQTYTLLLSC------CTEARSPYD 658
           +L +  + + Y+ +L         TEA S ++
Sbjct: 558 DLSIPLTKEVYSSVLCAYSKQGQVTEAESIFN 589



 Score = 46.2 bits (108), Expect = 0.070,   Method: Compositional matrix adjust.
 Identities = 29/114 (25%), Positives = 57/114 (50%), Gaps = 1/114 (0%)

Query: 538 YSIVMEVLGHCGYLDEAEAVFAEMR-RKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAM 596
           + +++  L   G ++    VF  M+ +KN+     +Y +++ L  +   V +A   +  M
Sbjct: 110 FPVLIRELSRRGCIELCVNVFKWMKIQKNYCARNDIYNMMIRLHARHNWVDQARGLFFEM 169

Query: 597 LQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCC 650
            +   +P+  T ++L++A  R GQ   A +L+  ML   + PS  TY  L++ C
Sbjct: 170 QKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDMLRAAIAPSRSTYNNLINAC 223


>gi|15240891|ref|NP_195731.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75174092|sp|Q9LFC5.1|PP360_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g01110
 gi|6759434|emb|CAB69839.1| putative protein [Arabidopsis thaliana]
 gi|28973740|gb|AAO64186.1| unknown protein [Arabidopsis thaliana]
 gi|110736884|dbj|BAF00399.1| hypothetical protein [Arabidopsis thaliana]
 gi|332002917|gb|AED90300.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 729

 Score =  147 bits (370), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 95/344 (27%), Positives = 165/344 (47%), Gaps = 10/344 (2%)

Query: 313 LAEEALGNTN------YSMDAYQANQVLKQLQDH---TVALGFFNWLRRQAGFKHDEHTY 363
           L EEA    N      +S   Y  N V+  L  H     A   F  + R +G   D  TY
Sbjct: 285 LMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLR-SGLSPDSTTY 343

Query: 364 TTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQV 423
            +++    +        K+   M      P++V ++ ++  + R+  L++AL  F  ++ 
Sbjct: 344 RSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKE 403

Query: 424 VGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQA 483
            G  PD V Y  LI  + + G + VAM++  +M   G + D  TY+ I++ L K   L  
Sbjct: 404 AGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGE 463

Query: 484 AHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVME 543
           A +LF EM  +   P+  T  I+I    K  N Q+A++L++ M+      D VTY+ +++
Sbjct: 464 ADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLD 523

Query: 544 VLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRP 603
             G  G +D A+ ++A+M  K  +P    Y +LV+     G++ +A+  ++ M+   ++P
Sbjct: 524 GFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKP 583

Query: 604 NVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
            V  CNS++  + R G  SD    L+ M++ G  P   +Y  L+
Sbjct: 584 TVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLI 627



 Score =  145 bits (365), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 88/310 (28%), Positives = 162/310 (52%), Gaps = 7/310 (2%)

Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLI 402
           AL +FN ++ +AG   D   YT ++    R         L ++M++ GC  +VVTYN ++
Sbjct: 394 ALMYFNSVK-EAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTIL 452

Query: 403 HSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLS 462
           H   +   L EA  +F +M      PD  T   LID H K G L  AM++++KM+   + 
Sbjct: 453 HGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIR 512

Query: 463 PDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKL 522
            D  TY+ +++  GK G +  A +++ +MV++  +P  ++Y+I++       +   A ++
Sbjct: 513 LDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRV 572

Query: 523 YRDMQNAGFEPDKVTYSIVMEVLGHC--GYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLW 580
           + +M +   +P  +  + +++  G+C  G   + E+   +M  + +VPD   Y  L+  +
Sbjct: 573 WDEMISKNIKPTVMICNSMIK--GYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGF 630

Query: 581 GKAGNVRKAWEWYEAML--QAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKP 638
            +  N+ KA+   + M   Q GL P+V T NS+L  F R  Q+ +A  +L+ M+  G+ P
Sbjct: 631 VREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNP 690

Query: 639 SLQTYTLLLS 648
              TYT +++
Sbjct: 691 DRSTYTCMIN 700



 Score =  131 bits (329), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 82/298 (27%), Positives = 136/298 (45%)

Query: 350 LRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRAN 409
           L R  GF         ++G L R         +  ++ R G   NV T N ++++  +  
Sbjct: 190 LLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQEISRSGVGINVYTLNIMVNALCKDG 249

Query: 410 YLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYS 469
            + +      Q+Q  G  PD VTY TLI  ++  G ++ A ++   M   G SP  +TY+
Sbjct: 250 KMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYN 309

Query: 470 VIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNA 529
            +IN L K G  + A ++F EM+  G  P+  TY  ++    K  +     K++ DM++ 
Sbjct: 310 TVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSR 369

Query: 530 GFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKA 589
              PD V +S +M +    G LD+A   F  ++    +PD  +Y +L+  + + G +  A
Sbjct: 370 DVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVA 429

Query: 590 WEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
                 MLQ G   +V T N++L    +   L +A  L   M    L P   T T+L+
Sbjct: 430 MNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILI 487



 Score =  129 bits (324), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 120/492 (24%), Positives = 213/492 (43%), Gaps = 24/492 (4%)

Query: 307 QWKWGPLAEEALGNTNYSMDAYQANQVLKQL-QDHTV-ALGFFNWLRRQAGFKHDEHTYT 364
           +  WG   E  +  +   ++ Y  N ++  L +D  +  +G F    ++ G   D  TY 
Sbjct: 217 ELAWGVYQE--ISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYN 274

Query: 365 TMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVV 424
           T++             +L++ M   G  P V TYN +I+   +      A +VF +M   
Sbjct: 275 TLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRS 334

Query: 425 GCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAA 484
           G  PD  TY +L+    K G +     ++  M++  + PD   +S +++   ++G+L  A
Sbjct: 335 GLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKA 394

Query: 485 HQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEV 544
              F  +   G IP+ V Y I+I    +      A+ L  +M   G   D VTY+ ++  
Sbjct: 395 LMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHG 454

Query: 545 LGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPN 604
           L     L EA+ +F EM  +   PD     +L+D   K GN++ A E ++ M +  +R +
Sbjct: 455 LCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLD 514

Query: 605 VPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL-SCCTEARSPYDMGFCH 663
           V T N+LL  F +VG +  A  +   M++  + P+  +Y++L+ + C++           
Sbjct: 515 VVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWD 574

Query: 664 ELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSE----DRESKRGLVDAVVDF 719
           E+++ +  P  M   SM        N  D   SFLE M SE    D  S   L+     F
Sbjct: 575 EMISKNIKPTVMICNSMIKGYCRSGNASDG-ESFLEKMISEGFVPDCISYNTLIYG---F 630

Query: 720 LHKSGLKEEAGSVWEV-AAQKNVYPDAVKEKGMSYWLINLHVMSDGTAVIALSRTLAWFR 778
           + +  + +  G V ++   Q  + PD      + +     + M +   V+          
Sbjct: 631 VREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVL---------- 680

Query: 779 KQMLISGVGPSR 790
           ++M+  GV P R
Sbjct: 681 RKMIERGVNPDR 692



 Score =  112 bits (281), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 94/396 (23%), Positives = 179/396 (45%), Gaps = 16/396 (4%)

Query: 359 DEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVF 418
           ++  +  ++    +AR+    ++    +   G   ++   N LI S  R  ++  A  V+
Sbjct: 164 NDSVFDLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVY 223

Query: 419 KQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKA 478
           +++   G   +  T   +++   K G ++       ++Q  G+ PD  TY+ +I+     
Sbjct: 224 QEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSK 283

Query: 479 GHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTY 538
           G ++ A +L   M  +G  P + TYN +I    K   Y+ A +++ +M  +G  PD  TY
Sbjct: 284 GLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTY 343

Query: 539 -SIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAML 597
            S++ME     G + E E VF++MR ++ VPD   +  ++ L+ ++GN+ KA  ++ ++ 
Sbjct: 344 RSLLMEACKK-GDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVK 402

Query: 598 QAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS--CCTEARS 655
           +AGL P+      L+  + R G +S A +L   ML  G    + TY  +L   C  +   
Sbjct: 403 EAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLG 462

Query: 656 PYDMGFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRESKRGLVDA 715
             D  F +E+   +  P    L  +        N+++ +  F +M      + KR  +D 
Sbjct: 463 EADKLF-NEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKM------KEKRIRLDV 515

Query: 716 V-----VDFLHKSGLKEEAGSVWEVAAQKNVYPDAV 746
           V     +D   K G  + A  +W     K + P  +
Sbjct: 516 VTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPI 551



 Score =  110 bits (276), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 74/301 (24%), Positives = 136/301 (45%), Gaps = 38/301 (12%)

Query: 341 TVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNR 400
           +VA+   N + +Q G   D  TY T++  L + +  G  +KL ++M      P+  T   
Sbjct: 427 SVAMNLRNEMLQQ-GCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTI 485

Query: 401 LIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAG 460
           LI  + +   L  A+++F++M+      D VTY TL+D   K G +D A +++  M +  
Sbjct: 486 LIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKE 545

Query: 461 LSPDTFTYSVIINCLGKAGHLQAAHQL----------------------FC--------- 489
           + P   +YS+++N L   GHL  A ++                      +C         
Sbjct: 546 ILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGE 605

Query: 490 ----EMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQ--NAGFEPDKVTYSIVME 543
               +M+++G +P+ ++YN +I    +  N   A  L + M+    G  PD  TY+ ++ 
Sbjct: 606 SFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILH 665

Query: 544 VLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRP 603
                  + EAE V  +M  +   PD   Y  +++ +    N+ +A+  ++ MLQ G  P
Sbjct: 666 GFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQRGFSP 725

Query: 604 N 604
           +
Sbjct: 726 D 726



 Score = 74.3 bits (181), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 64/298 (21%), Positives = 122/298 (40%), Gaps = 18/298 (6%)

Query: 356 FKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEAL 415
           FKH   + + M+ IL R+ +       L +M+R      +   N L  ++          
Sbjct: 109 FKHTSLSLSAMIHILVRSGRLSDAQSCLLRMIRRSGVSRLEIVNSLDSTFS--------- 159

Query: 416 DVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCL 475
                     C  +   +  LI  + +A  L  A + +  +++ G +      + +I  L
Sbjct: 160 ---------NCGSNDSVFDLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSL 210

Query: 476 GKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDK 535
            + G ++ A  ++ E+   G   N+ T NIM+    K    +        +Q  G  PD 
Sbjct: 211 VRIGWVELAWGVYQEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDI 270

Query: 536 VTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEA 595
           VTY+ ++      G ++EA  +   M  K + P    Y  +++   K G   +A E +  
Sbjct: 271 VTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAE 330

Query: 596 MLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEA 653
           ML++GL P+  T  SLL    + G + +   +   M +  + P L  ++ ++S  T +
Sbjct: 331 MLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRS 388



 Score = 68.6 bits (166), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 57/264 (21%), Positives = 117/264 (44%), Gaps = 7/264 (2%)

Query: 310 WGPLAEEALGNTNYSMDAY-QANQVLKQLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVG 368
           +  + E AL   +Y++      +  L  LQ+   A+  F  ++ +   + D  TY T++ 
Sbjct: 468 FNEMTERALFPDSYTLTILIDGHCKLGNLQN---AMELFQKMKEKR-IRLDVVTYNTLLD 523

Query: 369 ILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEP 428
             G+        ++   MV     P  ++Y+ L+++     +L EA  V+ +M     +P
Sbjct: 524 GFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKP 583

Query: 429 DRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLF 488
             +   ++I  + ++G         +KM + G  PD  +Y+ +I    +  ++  A  L 
Sbjct: 584 TVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLV 643

Query: 489 CEMVNQ--GCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLG 546
            +M  +  G +P++ TYN ++    +    + A  + R M   G  PD+ TY+ ++    
Sbjct: 644 KKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFV 703

Query: 547 HCGYLDEAEAVFAEMRRKNWVPDE 570
               L EA  +  EM ++ + PD+
Sbjct: 704 SQDNLTEAFRIHDEMLQRGFSPDD 727


>gi|302793330|ref|XP_002978430.1| hypothetical protein SELMODRAFT_108734 [Selaginella moellendorffii]
 gi|300153779|gb|EFJ20416.1| hypothetical protein SELMODRAFT_108734 [Selaginella moellendorffii]
          Length = 475

 Score =  147 bits (370), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 89/296 (30%), Positives = 154/296 (52%), Gaps = 3/296 (1%)

Query: 362 TYTTMVGILGRARQFGAINKLLDQMVRD-GCQPNVVTYNRLIHSYGRANYLNEALDVFKQ 420
           +Y +++  L +A++      +   MV +    P+VV+Y+ LI  + + + L  A  ++KQ
Sbjct: 123 SYNSLLNSLCKAKKVHQAFAIFSTMVSERSVVPDVVSYSILIDGFCKIDELGRAEKLYKQ 182

Query: 421 MQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGH 480
           M  + C P+  TY   ++   + G +  A  +Y++M +AG SPD  TYS +I+    A  
Sbjct: 183 MIDLNCVPNVTTYNAFLNGLMRKGRIADAQGVYEEMISAGCSPDVITYSTLIHGFSLARK 242

Query: 481 LQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSI 540
              AH+LF  M+++GC PN VTYN ++    K      A +L+R M   G +PDKVTY+ 
Sbjct: 243 HDQAHELFEAMISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVERGCDPDKVTYTT 302

Query: 541 VMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAG 600
           ++    + G +++A  VF EM  K   PD   Y  L+  + +AG   +A + ++ M+   
Sbjct: 303 LLYGFCNVGKIEQAVEVFDEMVSKGHDPDVVAYNCLLKGFFRAGKPGEARQLFQVMVSRE 362

Query: 601 LRPNVPTCNSLLSAFLRVGQLSDAYHLLQGM-LNLGLKPSLQTY-TLLLSCCTEAR 654
            +P+  + N ++    +  +L DA  + + M  + G  P L TY +L+   C E R
Sbjct: 363 CKPDTVSHNIMIDGLSKAKRLDDAVEVFERMEQDHGCSPDLVTYNSLIFGLCGEQR 418



 Score = 95.9 bits (237), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 72/251 (28%), Positives = 111/251 (44%), Gaps = 38/251 (15%)

Query: 435 TLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAA---------- 484
           ++I    KAG +D A+ + + M   G  PD  T+S++IN L KA  +Q A          
Sbjct: 54  SVIQELCKAGRVDSALSLLETMIKRGYCPDMATHSMLINELCKADKIQEAQEFLQGMNRT 113

Query: 485 ------------------------HQ---LFCEMVNQ-GCIPNLVTYNIMIALQAKARNY 516
                                   HQ   +F  MV++   +P++V+Y+I+I    K    
Sbjct: 114 ISTRASSCFSYNSLLNSLCKAKKVHQAFAIFSTMVSERSVVPDVVSYSILIDGFCKIDEL 173

Query: 517 QSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLL 576
             A KLY+ M +    P+  TY+  +  L   G + +A+ V+ EM      PD   Y  L
Sbjct: 174 GRAEKLYKQMIDLNCVPNVTTYNAFLNGLMRKGRIADAQGVYEEMISAGCSPDVITYSTL 233

Query: 577 VDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGL 636
           +  +  A    +A E +EAM+  G RPN  T N LL    +  +  +A+ L + M+  G 
Sbjct: 234 IHGFSLARKHDQAHELFEAMISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVERGC 293

Query: 637 KPSLQTYTLLL 647
            P   TYT LL
Sbjct: 294 DPDKVTYTTLL 304


>gi|302785473|ref|XP_002974508.1| hypothetical protein SELMODRAFT_101075 [Selaginella moellendorffii]
 gi|300158106|gb|EFJ24730.1| hypothetical protein SELMODRAFT_101075 [Selaginella moellendorffii]
          Length = 567

 Score =  147 bits (370), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 89/293 (30%), Positives = 146/293 (49%), Gaps = 3/293 (1%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           G++H+  TY  ++  L R  +    + +  +M+   CQP+  T+  L+    R+N L +A
Sbjct: 2   GYEHNVFTYNKLLLQLTREHRHDKASAVFQEMIDKSCQPDAFTFAILLRGLCRSNQLEKA 61

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
             +  +M+ +GC PD   Y  LI  ++KA     A     +M      P   TY+ I++ 
Sbjct: 62  RKLLGRMKEMGCVPDDAIYNALISGYSKAKDFGQAFKFLAEMVKNHCLPTVVTYTNIVDG 121

Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPD 534
           L KA   + A +L  EM ++GC PN+ TYN+++    + R    A K+  +M   G+ PD
Sbjct: 122 LCKAERTRDAVKLLDEMRDKGCSPNIYTYNVIVEGLCEERKLDEAKKMLEEMAVRGYFPD 181

Query: 535 KVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYE 594
            VTY+  ++ L  C  +DEA    A M      PD   Y  +++   K+G++  A    +
Sbjct: 182 VVTYNSFIKGLCKCDRVDEARKFLARM---PVTPDVVSYTTVINGLCKSGDLDSASRMLD 238

Query: 595 AMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
            M   G  P+V T +SL+  F + G++  A  LL  ML LG +P++  Y  LL
Sbjct: 239 HMSNRGCTPDVVTYSSLIDGFCKGGEVERAMGLLDSMLKLGCRPNMVAYNSLL 291



 Score =  139 bits (351), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 85/263 (32%), Positives = 134/263 (50%), Gaps = 3/263 (1%)

Query: 362 TYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQM 421
           TYT +V  L +A +     KLLD+M   GC PN+ TYN ++        L+EA  + ++M
Sbjct: 114 TYTNIVDGLCKAERTRDAVKLLDEMRDKGCSPNIYTYNVIVEGLCEERKLDEAKKMLEEM 173

Query: 422 QVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHL 481
            V G  PD VTY + I    K   +D A     +M    ++PD  +Y+ +IN L K+G L
Sbjct: 174 AVRGYFPDVVTYNSFIKGLCKCDRVDEARKFLARMP---VTPDVVSYTTVINGLCKSGDL 230

Query: 482 QAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIV 541
            +A ++   M N+GC P++VTY+ +I    K    + A+ L   M   G  P+ V Y+ +
Sbjct: 231 DSASRMLDHMSNRGCTPDVVTYSSLIDGFCKGGEVERAMGLLDSMLKLGCRPNMVAYNSL 290

Query: 542 MEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGL 601
           +  L   G++ +AE +  EM R+ + PD   Y   +D   KA  V+KA   ++ M++ G 
Sbjct: 291 LGALHRLGHIGKAEDMLVEMERRGFTPDVVSYNACIDGLCKAERVKKAKAVFDRMVERGC 350

Query: 602 RPNVPTCNSLLSAFLRVGQLSDA 624
            PN  + + L+   L    L D 
Sbjct: 351 TPNASSYSMLIVDILLYTVLLDG 373



 Score =  127 bits (319), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 86/299 (28%), Positives = 148/299 (49%), Gaps = 28/299 (9%)

Query: 359 DEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVF 418
           D  +YTT++  L ++    + +++LD M   GC P+VVTY+ LI  + +   +  A+ + 
Sbjct: 213 DVVSYTTVINGLCKSGDLDSASRMLDHMSNRGCTPDVVTYSSLIDGFCKGGEVERAMGLL 272

Query: 419 KQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKA 478
             M  +GC P+ V Y +L+    + G +  A DM  +M+  G +PD  +Y+  I+ L KA
Sbjct: 273 DSMLKLGCRPNMVAYNSLLGALHRLGHIGKAEDMLVEMERRGFTPDVVSYNACIDGLCKA 332

Query: 479 GHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTY 538
             ++ A  +F  MV +GC PN  +Y+++I                          D + Y
Sbjct: 333 ERVKKAKAVFDRMVERGCTPNASSYSMLIV-------------------------DILLY 367

Query: 539 SIVMEVLGHCGYLDEAEAVFAE-MRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAML 597
           +++++ L   G  DEA A+F++ +  K   PD   Y +++D   K   + KA + ++ ML
Sbjct: 368 TVLLDGLCKGGRFDEACALFSKVLDEKICEPDVFFYNVMLDSHCKRRQIDKALQIHKQML 427

Query: 598 QAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTY-TLLLSCCTEARS 655
           +     NV T N L+       +LSDA  +L  M++ G  P   TY TL+ + C   +S
Sbjct: 428 EKNC-CNVVTWNILVHGLCVDDRLSDAETMLLTMVDEGFIPDFVTYGTLVDAMCKCGKS 485



 Score =  107 bits (266), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 66/233 (28%), Positives = 111/233 (47%), Gaps = 12/233 (5%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPN----------VVTYNRLIHS 404
           GF  D  +Y   +  L +A +      + D+MV  GC PN          ++ Y  L+  
Sbjct: 314 GFTPDVVSYNACIDGLCKAERVKKAKAVFDRMVERGCTPNASSYSMLIVDILLYTVLLDG 373

Query: 405 YGRANYLNEALDVF-KQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSP 463
             +    +EA  +F K +    CEPD   Y  ++D H K   +D A+ ++K+M       
Sbjct: 374 LCKGGRFDEACALFSKVLDEKICEPDVFFYNVMLDSHCKRRQIDKALQIHKQMLEKNCC- 432

Query: 464 DTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLY 523
           +  T++++++ L     L  A  +   MV++G IP+ VTY  ++    K     +AL+L+
Sbjct: 433 NVVTWNILVHGLCVDDRLSDAETMLLTMVDEGFIPDFVTYGTLVDAMCKCGKSAAALELF 492

Query: 524 RDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLL 576
            +    G  PD VTYS ++  L H    +EA  +F ++  + WVPD+   GLL
Sbjct: 493 EEAVKGGCVPDVVTYSALITGLVHENMAEEAYLLFTKLVERRWVPDDKTLGLL 545



 Score = 76.3 bits (186), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 58/249 (23%), Positives = 112/249 (44%), Gaps = 5/249 (2%)

Query: 499 NLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVF 558
           N+ TYN ++    +   +  A  ++++M +   +PD  T++I++  L     L++A  + 
Sbjct: 6   NVFTYNKLLLQLTREHRHDKASAVFQEMIDKSCQPDAFTFAILLRGLCRSNQLEKARKLL 65

Query: 559 AEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRV 618
             M+    VPD+ +Y  L+  + KA +  +A+++   M++    P V T  +++    + 
Sbjct: 66  GRMKEMGCVPDDAIYNALISGYSKAKDFGQAFKFLAEMVKNHCLPTVVTYTNIVDGLCKA 125

Query: 619 GQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGFCHELMAVSGHPAHMFLL 678
            +  DA  LL  M + G  P++ TY +++    E R   +     E MAV G+   +   
Sbjct: 126 ERTRDAVKLLDEMRDKGCSPNIYTYNVIVEGLCEERKLDEAKKMLEEMAVRGYFPDVVTY 185

Query: 679 SMPSPGPDGQNVRDHVGSFLEMMH-SEDRESKRGLVDAVVDFLHKSGLKEEAGSVWEVAA 737
           +    G    +  D    FL  M  + D  S       V++ L KSG  + A  + +  +
Sbjct: 186 NSFIKGLCKCDRVDEARKFLARMPVTPDVVS----YTTVINGLCKSGDLDSASRMLDHMS 241

Query: 738 QKNVYPDAV 746
            +   PD V
Sbjct: 242 NRGCTPDVV 250


>gi|297827821|ref|XP_002881793.1| EMB2654 [Arabidopsis lyrata subsp. lyrata]
 gi|297327632|gb|EFH58052.1| EMB2654 [Arabidopsis lyrata subsp. lyrata]
          Length = 822

 Score =  147 bits (370), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 99/361 (27%), Positives = 167/361 (46%), Gaps = 38/361 (10%)

Query: 388 RDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLD 447
           ++ C  N + YN +I  + R N++++A  +F +MQ   C+PD  TY  LI+ H +AG   
Sbjct: 137 KNYCARNDI-YNMMIRLHARHNWVDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQWR 195

Query: 448 VAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMI 507
            AM++   M  A ++P   TY+ +IN  G +G+ + A ++  +M + G  P+LVT+NI++
Sbjct: 196 WAMNLMDDMLRAAIAPSRSTYNNLINACGSSGNWRQALEVCKKMTDNGVGPDLVTHNIVL 255

Query: 508 ALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMR--RKN 565
           +     R Y  AL  +  M+ A   PD  T++I++  L   G   +A  VF  MR  R  
Sbjct: 256 SAYKSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDVFNSMRDKRAE 315

Query: 566 WVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAY 625
             PD   +  ++ L+   G +      +EAML  GL+PN+ + N+L+ A+   G   +A 
Sbjct: 316 CRPDVVTFTSIMHLYSVRGEIENCRAVFEAMLAEGLKPNIVSYNALMGAYAVHGMSENAL 375

Query: 626 HLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGFCHELMAVSGHPAHMFLLSMPSPGP 685
            +   +   G+ P + +YT LL+    +R P             G    +FL        
Sbjct: 376 SVFGDIKRNGIVPDVVSYTSLLNSYGRSRQP-------------GKAKEVFL-------- 414

Query: 686 DGQNVRDHVGSFLEMMHSEDRESKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDA 745
                         MM  E R+      +A++D    +G   EA  ++    Q    P+ 
Sbjct: 415 --------------MMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGTKPNV 460

Query: 746 V 746
           V
Sbjct: 461 V 461



 Score =  143 bits (360), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 91/318 (28%), Positives = 162/318 (50%), Gaps = 11/318 (3%)

Query: 348 NWLRRQAGF---------KHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTY 398
           NW+ +  G          K D  TY  ++   GRA Q+     L+D M+R    P+  TY
Sbjct: 157 NWVDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDMLRAAIAPSRSTY 216

Query: 399 NRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQA 458
           N LI++ G +    +AL+V K+M   G  PD VT+  ++  +        A+  ++ M+ 
Sbjct: 217 NNLINACGSSGNWRQALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKG 276

Query: 459 AGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQ--GCIPNLVTYNIMIALQAKARNY 516
           A + PDT T+++II CL K G    A  +F  M ++   C P++VT+  ++ L +     
Sbjct: 277 AKVRPDTTTFNIIIYCLSKLGQSSQALDVFNSMRDKRAECRPDVVTFTSIMHLYSVRGEI 336

Query: 517 QSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLL 576
           ++   ++  M   G +P+ V+Y+ +M      G  + A +VF +++R   VPD   Y  L
Sbjct: 337 ENCRAVFEAMLAEGLKPNIVSYNALMGAYAVHGMSENALSVFGDIKRNGIVPDVVSYTSL 396

Query: 577 VDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGL 636
           ++ +G++    KA E +  M +   +PNV T N+L+ A+   G L++A  + + M   G 
Sbjct: 397 LNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGT 456

Query: 637 KPSLQTYTLLLSCCTEAR 654
           KP++ +   LL+ C+ ++
Sbjct: 457 KPNVVSVCTLLAACSRSK 474



 Score =  111 bits (277), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 96/411 (23%), Positives = 167/411 (40%), Gaps = 106/411 (25%)

Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLI 402
           AL  F  ++R  G   D  +YT+++   GR+RQ G   ++   M ++  +PNVVTYN LI
Sbjct: 374 ALSVFGDIKRN-GIVPDVVSYTSLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALI 432

Query: 403 HSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTL-------------------------- 436
            +YG   +L EA+++F+QM+  G +P+ V+ CTL                          
Sbjct: 433 DAYGSNGFLAEAVEIFRQMEQDGTKPNVVSVCTLLAACSRSKKKVNVETVLSAAQSRGIN 492

Query: 437 ---------IDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIIN-------------- 473
                    I  +  A  L+ A+ +Y+ M+   +  D+ T++++I+              
Sbjct: 493 LNTAAYNSAIGSYINAAELEKAIALYQTMRKKKVKADSVTFTILISGSCRMSKYPEAISY 552

Query: 474 ---------------------CLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAK 512
                                   K G +  A  +F +M   GC P+++ Y  M+     
Sbjct: 553 LKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCKPDVIAYTSMLHAYNA 612

Query: 513 ARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCG----------YLDEAE-----AV 557
           +  +  A +L+ +M+  G EPD +  S +M      G           + E E     AV
Sbjct: 613 SEKWGKACELFLEMEANGIEPDSIACSALMRAFNKGGQPSNVFVLMDLMREKEVPFTGAV 672

Query: 558 FAEM-----RRKNWV----------PDEPVYGL-----LVDLWGKAGNVRKAWEWYEAML 597
           F E+       + W           P  P   +     ++ L+GK+G V    + +  ++
Sbjct: 673 FFEIFSACNTLQEWKRAIDLIQMMDPYLPSLSIGLTNQMLYLFGKSGKVEAMMKLFYKII 732

Query: 598 QAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
            +G+  N  T   LL   L VG       +L+ M + G++PS Q Y  ++S
Sbjct: 733 ASGVEINFKTYAILLEHLLAVGNWRKYIEVLEWMSDAGIQPSNQMYRDIIS 783



 Score =  104 bits (259), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 74/298 (24%), Positives = 132/298 (44%), Gaps = 35/298 (11%)

Query: 388 RDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLD 447
           R+G  P+VV+Y  L++SYGR+    +A +VF  M+    +P+ VTY  LID +   GFL 
Sbjct: 383 RNGIVPDVVSYTSLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLA 442

Query: 448 VAMDMYKKMQAAGLSP-----------------------------------DTFTYSVII 472
            A++++++M+  G  P                                   +T  Y+  I
Sbjct: 443 EAVEIFRQMEQDGTKPNVVSVCTLLAACSRSKKKVNVETVLSAAQSRGINLNTAAYNSAI 502

Query: 473 NCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFE 532
                A  L+ A  L+  M  +    + VT+ I+I+   +   Y  A+   ++M++    
Sbjct: 503 GSYINAAELEKAIALYQTMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEMEDLSIP 562

Query: 533 PDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEW 592
             K  YS V+      G + EAE++F +M+     PD   Y  ++  +  +    KA E 
Sbjct: 563 LTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCKPDVIAYTSMLHAYNASEKWGKACEL 622

Query: 593 YEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCC 650
           +  M   G+ P+   C++L+ AF + GQ S+ + L+  M    +  +   +  + S C
Sbjct: 623 FLEMEANGIEPDSIACSALMRAFNKGGQPSNVFVLMDLMREKEVPFTGAVFFEIFSAC 680



 Score =  102 bits (254), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 75/334 (22%), Positives = 152/334 (45%), Gaps = 13/334 (3%)

Query: 335 KQLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQ----FGAINKLLDQMVRDG 390
           K  + ++ AL +F  L + A  + D  T+  ++  L +  Q        N + D+  R  
Sbjct: 259 KSGRQYSKALSYFE-LMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDVFNSMRDK--RAE 315

Query: 391 CQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAM 450
           C+P+VVT+  ++H Y     +     VF+ M   G +P+ V+Y  L+  +A  G  + A+
Sbjct: 316 CRPDVVTFTSIMHLYSVRGEIENCRAVFEAMLAEGLKPNIVSYNALMGAYAVHGMSENAL 375

Query: 451 DMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQ 510
            ++  ++  G+ PD  +Y+ ++N  G++     A ++F  M  +   PN+VTYN +I   
Sbjct: 376 SVFGDIKRNGIVPDVVSYTSLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAY 435

Query: 511 AKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDE 570
                   A++++R M+  G +P+ V+   ++            E V +  + +    + 
Sbjct: 436 GSNGFLAEAVEIFRQMEQDGTKPNVVSVCTLLAACSRSKKKVNVETVLSAAQSRGINLNT 495

Query: 571 PVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQG 630
             Y   +  +  A  + KA   Y+ M +  ++ +  T   L+S   R+ +  +A   L+ 
Sbjct: 496 AAYNSAIGSYINAAELEKAIALYQTMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKE 555

Query: 631 MLNLGLKPSLQTYTLLLSC------CTEARSPYD 658
           M +L +  + + Y+ +L         TEA S ++
Sbjct: 556 MEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFN 589



 Score = 46.6 bits (109), Expect = 0.057,   Method: Compositional matrix adjust.
 Identities = 29/114 (25%), Positives = 57/114 (50%), Gaps = 1/114 (0%)

Query: 538 YSIVMEVLGHCGYLDEAEAVFAEMR-RKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAM 596
           + +++  L   G ++    VF  M+ +KN+     +Y +++ L  +   V +A   +  M
Sbjct: 110 FPVLIRELSRRGCIELCVNVFKWMKSQKNYCARNDIYNMMIRLHARHNWVDQARGLFFEM 169

Query: 597 LQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCC 650
            +   +P+  T ++L++A  R GQ   A +L+  ML   + PS  TY  L++ C
Sbjct: 170 QKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDMLRAAIAPSRSTYNNLINAC 223


>gi|125548803|gb|EAY94625.1| hypothetical protein OsI_16402 [Oryza sativa Indica Group]
          Length = 769

 Score =  147 bits (370), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 90/311 (28%), Positives = 151/311 (48%), Gaps = 16/311 (5%)

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
           + GF  D  TY+ ++  L  A +      L  +M   G  P+V TY  LI S+ +A  + 
Sbjct: 450 RKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIE 509

Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
           +A  +F++M+ VGC P  VTY  LI  + KA  +  A D++ +M  AG  P+  TY  ++
Sbjct: 510 QAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALV 569

Query: 473 NCLGKAGHLQAAHQLFCEMVNQG----------------CIPNLVTYNIMIALQAKARNY 516
           + L KAG++  A +++ +++                     PN+VTY  ++    KA   
Sbjct: 570 DGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKV 629

Query: 517 QSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLL 576
             A +L   M ++G EP+ + Y  +++     G +D A+ VF +M +  ++P    Y  L
Sbjct: 630 DHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSL 689

Query: 577 VDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGL 636
           +D   K G +  A +    ML+    PNV T  +++    R+G+   A  LL  M   G 
Sbjct: 690 IDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGC 749

Query: 637 KPSLQTYTLLL 647
            P++ TYT L+
Sbjct: 750 SPNVVTYTALI 760



 Score =  141 bits (355), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 88/289 (30%), Positives = 146/289 (50%), Gaps = 16/289 (5%)

Query: 375 QFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYC 434
           +F    +L+ +M+R G  P+  TY+++I     A  + +A  +F++M++VG  PD  TY 
Sbjct: 437 KFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYT 496

Query: 435 TLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQ 494
            LID   KAG ++ A  ++++M++ G SP   TY+ +I+   KA  +  A+ +F  MV+ 
Sbjct: 497 ILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDA 556

Query: 495 GCIPNLVTYNIMIALQAKARNYQSALKLY------RDMQNAGF----------EPDKVTY 538
           GC PN VTY  ++    KA N   A ++Y       D  ++ F           P+ VTY
Sbjct: 557 GCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTY 616

Query: 539 SIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQ 598
             +++ L     +D A  +   M      P+  VY  L+D + KAG +  A E +  M +
Sbjct: 617 GALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTK 676

Query: 599 AGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
            G  P+V T  SL+    + G+L  A  +L  ML     P++ TYT ++
Sbjct: 677 CGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMI 725



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 83/280 (29%), Positives = 135/280 (48%), Gaps = 16/280 (5%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           +  G   D +TYT ++    +A        L ++M   GC P VVTY  LIH+Y +A  +
Sbjct: 484 KMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQV 543

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAG----------- 460
            +A D+F +M   GC P+ VTY  L+D   KAG +  A ++Y K+               
Sbjct: 544 PQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPC 603

Query: 461 -----LSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARN 515
                L+P+  TY  +++ L KA  +  AH+L   M++ GC PN + Y+ +I    KA  
Sbjct: 604 EDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGK 663

Query: 516 YQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGL 575
             SA +++  M   G+ P   TY+ +++ +   G LD A  V ++M + +  P+   Y  
Sbjct: 664 IDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTA 723

Query: 576 LVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAF 615
           ++D   + G   KA +    M + G  PNV T  +L+   
Sbjct: 724 MIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGL 763



 Score =  135 bits (341), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 84/338 (24%), Positives = 156/338 (46%), Gaps = 11/338 (3%)

Query: 304 ILRQWKWGPLAEEALGNTNYSMDAYQANQVLKQLQDHTV---ALGFFNWLRRQAGFKHDE 360
           + ++ +W   A + +   ++ +D      ++  L + +    A+ F + +R  +    + 
Sbjct: 254 LCKEGRWAD-ALDMIEREDFKLDTVLCTHMISGLMEASYFDEAMSFLHRMRCNSCIP-NV 311

Query: 361 HTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQ 420
            TY T++    + +Q G   ++++ M+ +GC PN   +N L+HSY        A  +  +
Sbjct: 312 VTYRTLLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNR 371

Query: 421 MQVVGCEPDRVTYCTLI------DIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
           M   GC P  V Y   I      +       LD+A  +Y +M AA    +    +    C
Sbjct: 372 MTTCGCPPGYVVYNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARC 431

Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPD 534
           L   G    A QL  EM+ +G +P+  TY+ +I     A   + A  L+++M+  G  PD
Sbjct: 432 LCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPD 491

Query: 535 KVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYE 594
             TY+I+++     G +++A+ +F EMR     P    Y  L+  + KA  V +A + + 
Sbjct: 492 VYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFH 551

Query: 595 AMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGML 632
            M+ AG RPN  T  +L+    + G +S A+ +   ++
Sbjct: 552 RMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLI 589



 Score =  135 bits (340), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 85/287 (29%), Positives = 141/287 (49%), Gaps = 22/287 (7%)

Query: 380 NKLLDQMVRDGC---QPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTL 436
            K+  +M+   C   + NV  + R +   G+    ++A  + K+M   G  PD  TY  +
Sbjct: 407 EKIYGEMLAANCVLNKVNVANFARCLCGVGK---FDKAFQLIKEMMRKGFVPDTSTYSKV 463

Query: 437 IDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGC 496
           I     A  ++ A  ++++M+  G++PD +TY+++I+   KAG ++ A  LF EM + GC
Sbjct: 464 ITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGC 523

Query: 497 IPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEA 556
            P +VTY  +I    KA+    A  ++  M +AG  P+ VTY  +++ L   G + +A  
Sbjct: 524 SPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFE 583

Query: 557 VFAEM----------------RRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAG 600
           V+A++                 R    P+   YG LVD   KA  V  A E  +AML +G
Sbjct: 584 VYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSG 643

Query: 601 LRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
             PN    ++L+  F + G++  A  +   M   G  PS+ TYT L+
Sbjct: 644 CEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLI 690



 Score =  110 bits (276), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 121/495 (24%), Positives = 186/495 (37%), Gaps = 66/495 (13%)

Query: 301 VSRILRQWKWGPLAEEA--LGNTNYSMDAYQANQVLKQLQDH-TVALGF-FNWLRRQAGF 356
           V R  R   W    EE   L +  Y       N +++ L     V LGF       ++GF
Sbjct: 181 VRRCCRGGMWNEALEELGRLKDFGYRPSKVTYNALVQVLSSAGQVDLGFRVQKEMSESGF 240

Query: 357 KHDEHTYTTMVGILGRAR-QFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEAL 415
             D  T    VG    A  + G     LD + R+  + + V    +I     A+Y +EA+
Sbjct: 241 CMDRFT----VGCFAHALCKEGRWADALDMIEREDFKLDTVLCTHMISGLMEASYFDEAM 296

Query: 416 DVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCL 475
               +M+   C P+ VTY TL+    K   L     +   M   G +P+   ++ +++  
Sbjct: 297 SFLHRMRCNSCIPNVVTYRTLLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSY 356

Query: 476 GKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIA---------------LQAK-------- 512
                   A++L   M   GC P  V YNI I                L  K        
Sbjct: 357 CNEKDYAYAYKLLNRMTTCGCPPGYVVYNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAA 416

Query: 513 ------------AR------NYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEA 554
                       AR       +  A +L ++M   GF PD  TYS V+  L H   +++A
Sbjct: 417 NCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKA 476

Query: 555 EAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSA 614
             +F EM+     PD   Y +L+D + KAG + +A   +E M   G  P V T  +L+ A
Sbjct: 477 FLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHA 536

Query: 615 FLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS-CCTEARSPYDMGFCHELMAVSGHPA 673
           +L+  Q+  A  +   M++ G +P+  TY  L+   C             +L+  S    
Sbjct: 537 YLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSAD 596

Query: 674 HMFLLSMPSPGPDGQNV---------------RDHVGSFLEMMHSEDRESKRGLVDAVVD 718
             F            NV                DH    L+ M S   E    + DA++D
Sbjct: 597 SDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALID 656

Query: 719 FLHKSGLKEEAGSVW 733
              K+G  + A  V+
Sbjct: 657 GFCKAGKIDSAQEVF 671



 Score =  103 bits (257), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 54/155 (34%), Positives = 85/155 (54%)

Query: 393 PNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDM 452
           PNVVTY  L+    +A+ ++ A ++   M   GCEP+ + Y  LID   KAG +D A ++
Sbjct: 611 PNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEV 670

Query: 453 YKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAK 512
           + +M   G  P   TY+ +I+ + K G L  A ++  +M+   C PN+VTY  MI    +
Sbjct: 671 FLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCR 730

Query: 513 ARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGH 547
               + ALKL   M+  G  P+ VTY+ +++ LG 
Sbjct: 731 IGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGQ 765



 Score =  100 bits (250), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 94/413 (22%), Positives = 147/413 (35%), Gaps = 114/413 (27%)

Query: 346 FFNWLRRQAGFKHDEHTYTTM---VGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLI 402
           FF W  RQ G+ H    Y  +   +G  GRAR      +LL ++  +  +      N L+
Sbjct: 125 FFLWAERQVGYSHTGACYDALADALGFDGRARD---AERLLREIGEEDREVLGRLLNVLV 181

Query: 403 HSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLS 462
               R    NEAL+   +++  G  P +VTY  L+ + + AG +D+   + K+M  +G  
Sbjct: 182 RRCCRGGMWNEALEELGRLKDFGYRPSKVTYNALVQVLSSAGQVDLGFRVQKEMSESGFC 241

Query: 463 PDTFTYSVIINCLGKAG--------------------------------HLQAAHQLFCE 490
            D FT     + L K G                                +   A      
Sbjct: 242 MDRFTVGCFAHALCKEGRWADALDMIEREDFKLDTVLCTHMISGLMEASYFDEAMSFLHR 301

Query: 491 MVNQGCIPNLVTYNIMIA--LQAK---------------------------------ARN 515
           M    CIPN+VTY  +++  L+ K                                  ++
Sbjct: 302 MRCNSCIPNVVTYRTLLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKD 361

Query: 516 YQSALKLYRDMQNAGFEPDKVTYSIVM--------------------------------- 542
           Y  A KL   M   G  P  V Y+I +                                 
Sbjct: 362 YAYAYKLLNRMTTCGCPPGYVVYNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLN 421

Query: 543 --------EVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYE 594
                     L   G  D+A  +  EM RK +VPD   Y  ++     A  V KA+  ++
Sbjct: 422 KVNVANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQ 481

Query: 595 AMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
            M   G+ P+V T   L+ +F + G +  A  L + M ++G  P++ TYT L+
Sbjct: 482 EMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALI 534



 Score =  100 bits (248), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 70/257 (27%), Positives = 121/257 (47%), Gaps = 23/257 (8%)

Query: 348 NWL---RRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHS 404
            WL    R  G      TYT ++    +A+Q    N +  +MV  GC+PN VTY  L+  
Sbjct: 512 QWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDG 571

Query: 405 YGRANYLNEALDVFKQMQVVG------------CE------PDRVTYCTLIDIHAKAGFL 446
             +A  +++A +V+ ++  +G            CE      P+ VTY  L+D   KA  +
Sbjct: 572 LCKAGNISKAFEVYAKL--IGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKV 629

Query: 447 DVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIM 506
           D A ++   M ++G  P+   Y  +I+   KAG + +A ++F +M   G +P++ TY  +
Sbjct: 630 DHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSL 689

Query: 507 IALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNW 566
           I    K      A+K+   M      P+ VTY+ +++ L   G  ++A  + + M  K  
Sbjct: 690 IDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGC 749

Query: 567 VPDEPVYGLLVDLWGKA 583
            P+   Y  L+D  G++
Sbjct: 750 SPNVVTYTALIDGLGQS 766


>gi|297737955|emb|CBI27156.3| unnamed protein product [Vitis vinifera]
          Length = 625

 Score =  147 bits (370), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 74/290 (25%), Positives = 151/290 (52%)

Query: 362 TYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQM 421
           TYT ++ + G+A +     K+  +M    C+PN+ T+  L++++ R     +A ++F+Q+
Sbjct: 313 TYTMLINLYGKASKSYMALKVFHEMRSQKCKPNICTFTALVNAFAREGLCEKAEEIFEQL 372

Query: 422 QVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHL 481
           Q  G EPD   Y  L++ +++AGF   A +++  MQ  G  PD  +Y+++++  G+AG  
Sbjct: 373 QEAGLEPDVYAYNALMEAYSRAGFPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLH 432

Query: 482 QAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIV 541
           + A  +F  M   G  P + ++ ++++  ++A       ++   M  +G +PD    + +
Sbjct: 433 EDAQAVFEVMKRLGITPTMKSHMLLLSAYSRAGKVAKCEEIVNQMHKSGIKPDTFVLNSM 492

Query: 542 MEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGL 601
           + + G  G  ++ E V   M +  +  D   Y +L++++G+AG   +  E + ++    L
Sbjct: 493 LNLYGRLGQFEKMEEVLTAMEKGPYPADISTYNILINIYGRAGFFARMEELFRSLPARNL 552

Query: 602 RPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCT 651
            P+V T  S + A+ R  Q +    + + M++ G  P   T  +LLS C+
Sbjct: 553 IPDVVTWTSRIGAYSRRKQYNRCLEVFEEMIDAGCYPDGGTAKVLLSACS 602



 Score =  142 bits (359), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 82/290 (28%), Positives = 143/290 (49%)

Query: 349 WLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRA 408
           W+  ++ F  D   Y  ++   G+   +        +++   C P   TY  L+ +Y  +
Sbjct: 195 WILYRSSFHPDVICYNLLIDAYGQKSLYKKAESTYLELLEARCVPTEDTYALLLKAYCTS 254

Query: 409 NYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTY 468
             L +A  VF +M+  G  P  V Y   ID   K G    A++++++M+     P T TY
Sbjct: 255 GLLEKAEAVFAEMRKYGFPPSAVVYNAYIDGLMKGGDTQKAVEIFERMKRDRCQPSTATY 314

Query: 469 SVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQN 528
           +++IN  GKA     A ++F EM +Q C PN+ T+  ++   A+    + A +++  +Q 
Sbjct: 315 TMLINLYGKASKSYMALKVFHEMRSQKCKPNICTFTALVNAFAREGLCEKAEEIFEQLQE 374

Query: 529 AGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRK 588
           AG EPD   Y+ +ME     G+   A  +F+ M+     PD   Y ++VD +G+AG    
Sbjct: 375 AGLEPDVYAYNALMEAYSRAGFPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHED 434

Query: 589 AWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKP 638
           A   +E M + G+ P + +   LLSA+ R G+++    ++  M   G+KP
Sbjct: 435 AQAVFEVMKRLGITPTMKSHMLLLSAYSRAGKVAKCEEIVNQMHKSGIKP 484



 Score =  137 bits (344), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 100/401 (24%), Positives = 182/401 (45%), Gaps = 27/401 (6%)

Query: 363 YTTMVGILGRARQFGAINKLLDQMV--------RDGCQPNVVTYNRLIHSYGRANYLNEA 414
           +TT   I+  A Q   +NK  D +V        R    P+V+ YN LI +YG+ +   +A
Sbjct: 167 HTTWDDIINVAVQL-RLNKQWDAIVLICGWILYRSSFHPDVICYNLLIDAYGQKSLYKKA 225

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
              + ++    C P   TY  L+  +  +G L+ A  ++ +M+  G  P    Y+  I+ 
Sbjct: 226 ESTYLELLEARCVPTEDTYALLLKAYCTSGLLEKAEAVFAEMRKYGFPPSAVVYNAYIDG 285

Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPD 534
           L K G  Q A ++F  M    C P+  TY ++I L  KA     ALK++ +M++   +P+
Sbjct: 286 LMKGGDTQKAVEIFERMKRDRCQPSTATYTMLINLYGKASKSYMALKVFHEMRSQKCKPN 345

Query: 535 KVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYE 594
             T++ ++      G  ++AE +F +++     PD   Y  L++ + +AG    A E + 
Sbjct: 346 ICTFTALVNAFAREGLCEKAEEIFEQLQEAGLEPDVYAYNALMEAYSRAGFPYGAAEIFS 405

Query: 595 AMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEAR 654
            M   G  P+  + N ++ A+ R G   DA  + + M  LG+ P+++++ LLLS  + A 
Sbjct: 406 LMQHMGCEPDRASYNIMVDAYGRAGLHEDAQAVFEVMKRLGITPTMKSHMLLLSAYSRAG 465

Query: 655 SPYDMGFCHEL---MAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEM------MHSED 705
               +  C E+   M  SG     F+L+         N+   +G F +M      M    
Sbjct: 466 K---VAKCEEIVNQMHKSGIKPDTFVLN------SMLNLYGRLGQFEKMEEVLTAMEKGP 516

Query: 706 RESKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAV 746
             +     + +++   ++G       ++     +N+ PD V
Sbjct: 517 YPADISTYNILINIYGRAGFFARMEELFRSLPARNLIPDVV 557



 Score =  136 bits (342), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 80/327 (24%), Positives = 161/327 (49%), Gaps = 7/327 (2%)

Query: 322 NYSMDAYQANQVLKQLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINK 381
           N  +DAY    + K+ +   + L        +A     E TY  ++     +        
Sbjct: 210 NLLIDAYGQKSLYKKAESTYLEL-------LEARCVPTEDTYALLLKAYCTSGLLEKAEA 262

Query: 382 LLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHA 441
           +  +M + G  P+ V YN  I    +     +A+++F++M+   C+P   TY  LI+++ 
Sbjct: 263 VFAEMRKYGFPPSAVVYNAYIDGLMKGGDTQKAVEIFERMKRDRCQPSTATYTMLINLYG 322

Query: 442 KAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLV 501
           KA    +A+ ++ +M++    P+  T++ ++N   + G  + A ++F ++   G  P++ 
Sbjct: 323 KASKSYMALKVFHEMRSQKCKPNICTFTALVNAFAREGLCEKAEEIFEQLQEAGLEPDVY 382

Query: 502 TYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEM 561
            YN ++   ++A     A +++  MQ+ G EPD+ +Y+I+++  G  G  ++A+AVF  M
Sbjct: 383 AYNALMEAYSRAGFPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHEDAQAVFEVM 442

Query: 562 RRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQL 621
           +R    P    + LL+  + +AG V K  E    M ++G++P+    NS+L+ + R+GQ 
Sbjct: 443 KRLGITPTMKSHMLLLSAYSRAGKVAKCEEIVNQMHKSGIKPDTFVLNSMLNLYGRLGQF 502

Query: 622 SDAYHLLQGMLNLGLKPSLQTYTLLLS 648
                +L  M        + TY +L++
Sbjct: 503 EKMEEVLTAMEKGPYPADISTYNILIN 529



 Score = 95.5 bits (236), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 66/292 (22%), Positives = 120/292 (41%), Gaps = 71/292 (24%)

Query: 342 VALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRL 401
           +AL  F+ +R Q   K +  T+T +V    R        ++ +Q+   G +P+V  YN L
Sbjct: 329 MALKVFHEMRSQKC-KPNICTFTALVNAFAREGLCEKAEEIFEQLQEAGLEPDVYAYNAL 387

Query: 402 IHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYK------- 454
           + +Y RA +   A ++F  MQ +GCEPDR +Y  ++D + +AG  + A  +++       
Sbjct: 388 MEAYSRAGFPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHEDAQAVFEVMKRLGI 447

Query: 455 ----------------------------KMQAAGLSPDTF-------------------- 466
                                       +M  +G+ PDTF                    
Sbjct: 448 TPTMKSHMLLLSAYSRAGKVAKCEEIVNQMHKSGIKPDTFVLNSMLNLYGRLGQFEKMEE 507

Query: 467 ---------------TYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQA 511
                          TY+++IN  G+AG      +LF  +  +  IP++VT+   I   +
Sbjct: 508 VLTAMEKGPYPADISTYNILINIYGRAGFFARMEELFRSLPARNLIPDVVTWTSRIGAYS 567

Query: 512 KARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRR 563
           + + Y   L+++ +M +AG  PD  T  +++    +   + E   V   M +
Sbjct: 568 RRKQYNRCLEVFEEMIDAGCYPDGGTAKVLLSACSNGDQIQEVTTVIRTMHK 619


>gi|255660798|gb|ACU25568.1| pentatricopeptide repeat-containing protein [Verbena intermedia]
          Length = 418

 Score =  147 bits (370), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 84/279 (30%), Positives = 153/279 (54%)

Query: 370 LGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPD 429
           L + + F  +    ++ +  G   ++  +N L+HS+ +   +  A  VF  +   G  P 
Sbjct: 111 LMKLKYFKLVWGFYEENLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPS 170

Query: 430 RVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFC 489
            V++ TL++ + K G L+    +   MQA+G+ PD +TYSV+IN L K   +  A+ LF 
Sbjct: 171 VVSFNTLMNGYIKLGDLNEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANVLFD 230

Query: 490 EMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCG 549
           EM+++G +PN VT+  +I    K      A+++Y+ M +    PD +TY+ ++  L   G
Sbjct: 231 EMLDKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKG 290

Query: 550 YLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCN 609
            L +A+ +  EM  K   PD+  Y  L+D   K G++  A+E+ + M++  +R +     
Sbjct: 291 DLKQAQDLIDEMIMKGLKPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYT 350

Query: 610 SLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
           +L+S   + G+  DA  +L+ ML++GLKP + TYT++++
Sbjct: 351 ALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIIN 389



 Score =  122 bits (307), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 81/316 (25%), Positives = 154/316 (48%), Gaps = 10/316 (3%)

Query: 335 KQLQDHTVALGFFNWL------RRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVR 388
           +++ +H + L +F  +        + G+    + +  ++    +  +      + D + +
Sbjct: 105 RKVLEHLMKLKYFKLVWGFYEENLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITK 164

Query: 389 DGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDV 448
            G +P+VV++N L++ Y +   LNE   +   MQ  G +PD  TY  LI+   K   +D 
Sbjct: 165 WGLRPSVVSFNTLMNGYIKLGDLNEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDD 224

Query: 449 AMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIA 508
           A  ++ +M   GL P+  T++ +I+   K G +  A +++ +M++Q   P+L+TYN +I 
Sbjct: 225 ANVLFDEMLDKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIY 284

Query: 509 LQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHC--GYLDEAEAVFAEMRRKNW 566
              K  + + A  L  +M   G +PDK+TY+ +++  G+C  G L+ A      M ++N 
Sbjct: 285 GLCKKGDLKQAQDLIDEMIMKGLKPDKITYTTLID--GNCKEGDLETAFEYRKRMIKENI 342

Query: 567 VPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYH 626
             D+  Y  L+    + G    A +    ML  GL+P + T   +++ F + G +     
Sbjct: 343 RLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSK 402

Query: 627 LLQGMLNLGLKPSLQT 642
           LL+ M   G  PS+ T
Sbjct: 403 LLKEMQRDGYMPSVVT 418


>gi|152717466|dbj|BAF73724.1| pentatricopeptide repeat protein [Raphanus sativus]
          Length = 687

 Score =  147 bits (370), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 116/401 (28%), Positives = 183/401 (45%), Gaps = 20/401 (4%)

Query: 362 TYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQM 421
           T+TT++  L R  +      LLD+M+ DG QP  +TY  ++    +      AL++ ++M
Sbjct: 186 TFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKM 245

Query: 422 QVVG-CEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGH 480
           + V    P+ V Y  +ID   K G    A +++ +MQ  G+ PD FTY+ +I     +G 
Sbjct: 246 EEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGR 305

Query: 481 LQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSI 540
              A QL  EM+ +   P++VTYN +I    K   +  A +LY +M   G  P+ +TYS 
Sbjct: 306 WSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSS 365

Query: 541 VMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAG 600
           +++       LD AE +F  M  K   P+   +  L+D +  A  +    E    M + G
Sbjct: 366 MIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETG 425

Query: 601 LRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTY-TLLLSCCTEARSPYDM 659
           L  +  T N+L+  F  VG L+ A  LLQ M++ GL P + T  TLL   C   +    +
Sbjct: 426 LVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDAL 485

Query: 660 GFCHELMAVSGHPAHMFLLSMPSPG--PDGQNVRDHV------GSFLEMMHSEDRESKRG 711
               E+  V          S P  G  PD Q     +      G FLE     +    RG
Sbjct: 486 ----EMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRG 541

Query: 712 LV------DAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAV 746
           +V       +++D L K    +EA  +++    K+  P+ V
Sbjct: 542 IVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVV 582



 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 93/337 (27%), Positives = 163/337 (48%), Gaps = 7/337 (2%)

Query: 333 VLKQLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQ 392
           V+ +++   + +  +  + R+   + D +++T ++       +         ++ + G  
Sbjct: 88  VVVRMERPDLVISLYQKMERKQ-IRCDIYSFTILIKCFCSCSKLPFALSTFGKLTKLGLH 146

Query: 393 PNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDM 452
           P+VVT+N L+H     + ++EAL++F QM    C P+ VT+ TL++   + G +  A+ +
Sbjct: 147 PDVVTFNTLLHGLCVEDRVSEALNLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVAL 206

Query: 453 YKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQG-CIPNLVTYNIMIALQA 511
             +M   GL P   TY  I++ + K G   +A  L  +M      IPN+V Y+ +I    
Sbjct: 207 LDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLC 266

Query: 512 KARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHC--GYLDEAEAVFAEMRRKNWVPD 569
           K   +  A  L+ +MQ  G  PD  TY+ +  ++G C  G   +AE +  EM  +   PD
Sbjct: 267 KDGRHSDAQNLFTEMQEKGIFPDLFTYNSM--IVGFCSSGRWSDAEQLLQEMLERKISPD 324

Query: 570 EPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQ 629
              Y  L++ + K G   +A E Y+ ML  G+ PN  T +S++  F +  +L  A H+  
Sbjct: 325 VVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFY 384

Query: 630 GMLNLGLKPSLQTY-TLLLSCCTEARSPYDMGFCHEL 665
            M   G  P+L T+ TL+   C   R    M   HE+
Sbjct: 385 LMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEM 421



 Score =  141 bits (355), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 86/298 (28%), Positives = 149/298 (50%), Gaps = 11/298 (3%)

Query: 362 TYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQM 421
           TY++M+    +  +  A   +   M   GC PN++T+N LI  Y  A  +++ +++  +M
Sbjct: 362 TYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEM 421

Query: 422 QVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHL 481
              G   D  TY TLI      G L+ A+D+ ++M ++GL PD  T   +++ L   G L
Sbjct: 422 TETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKL 481

Query: 482 QAAHQLFCEMVN-----------QGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAG 530
           + A ++F  M              G  P++ TYNI+I+       +  A +LY +M + G
Sbjct: 482 KDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRG 541

Query: 531 FEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAW 590
             PD +TYS +++ L     LDEA  +F  M  K++ P+   +  L++ + KAG V    
Sbjct: 542 IVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGL 601

Query: 591 EWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
           E +  M + G+  N  T  +L+  F +VG ++ A  + Q M++ G+ P   T   +L+
Sbjct: 602 ELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLT 659



 Score =  135 bits (339), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 88/310 (28%), Positives = 152/310 (49%), Gaps = 16/310 (5%)

Query: 353 QAGFKHDEHTYTTMV-GILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           + G +  + TY T+V G+  +     A+N L          PNVV Y+ +I S  +    
Sbjct: 212 EDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRH 271

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
           ++A ++F +MQ  G  PD  TY ++I     +G    A  + ++M    +SPD  TY+ +
Sbjct: 272 SDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNAL 331

Query: 472 INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF 531
           IN   K G    A +L+ EM+ +G IPN +TY+ MI    K     +A  ++  M   G 
Sbjct: 332 INAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGC 391

Query: 532 EPDKVTYSIVMEVLGHCG--YLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKA 589
            P+ +T++ +++  G+CG   +D+   +  EM     V D   Y  L+  +   G++  A
Sbjct: 392 SPNLITFNTLID--GYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAA 449

Query: 590 WEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNL-----------GLKP 638
            +  + M+ +GL P++ TC++LL      G+L DA  + + M              G++P
Sbjct: 450 LDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEP 509

Query: 639 SLQTYTLLLS 648
            +QTY +L+S
Sbjct: 510 DVQTYNILIS 519



 Score =  133 bits (334), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 93/354 (26%), Positives = 161/354 (45%), Gaps = 47/354 (13%)

Query: 340 HTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYN 399
           H+ A   F  ++ +  F  D  TY +M+     + ++    +LL +M+     P+VVTYN
Sbjct: 271 HSDAQNLFTEMQEKGIFP-DLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYN 329

Query: 400 RLIHS-----------------------------------YGRANYLNEALDVFKQMQVV 424
            LI++                                   + + N L+ A  +F  M   
Sbjct: 330 ALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATK 389

Query: 425 GCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAA 484
           GC P+ +T+ TLID +  A  +D  M++  +M   GL  DT TY+ +I+     G L AA
Sbjct: 390 GCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAA 449

Query: 485 HQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNA-----------GFEP 533
             L  EM++ G  P++VT + ++         + AL++++ MQ +           G EP
Sbjct: 450 LDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEP 509

Query: 534 DKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWY 593
           D  TY+I++  L + G   EAE ++ EM  +  VPD   Y  ++D   K   + +A + +
Sbjct: 510 DVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMF 569

Query: 594 EAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
           ++M      PNV T  +L++ + + G++ D   L   M   G+  +  TY  L+
Sbjct: 570 DSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLI 623



 Score =  132 bits (332), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 84/296 (28%), Positives = 148/296 (50%), Gaps = 15/296 (5%)

Query: 349 WLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRA 408
           +L    G   +  T+ T++     A++     +LL +M   G   +  TYN LIH +   
Sbjct: 384 YLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLV 443

Query: 409 NYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAA--------- 459
             LN ALD+ ++M   G  PD VT  TL+D     G L  A++M+K MQ +         
Sbjct: 444 GDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHP 503

Query: 460 --GLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQ 517
             G+ PD  TY+++I+ L   G    A +L+ EM ++G +P+ +TY+ MI    K     
Sbjct: 504 FNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLD 563

Query: 518 SALKLYRDMQNAGFEPDKVTYSIVMEVLGHC--GYLDEAEAVFAEMRRKNWVPDEPVYGL 575
            A +++  M +  F P+ VT++ ++   G+C  G +D+   +F EM R+  V +   Y  
Sbjct: 564 EATQMFDSMGSKSFSPNVVTFTTLIN--GYCKAGRVDDGLELFCEMGRRGIVANAITYIT 621

Query: 576 LVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGM 631
           L+  + K GN+  A + ++ M+ +G+ P+  T  ++L+      +L  A  +L+ +
Sbjct: 622 LICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRAVAMLEKL 677



 Score =  114 bits (286), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 80/317 (25%), Positives = 150/317 (47%), Gaps = 14/317 (4%)

Query: 363 YTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQ 422
           +  ++G++ R  +   +  L  +M R   + ++ ++  LI  +   + L  AL  F ++ 
Sbjct: 82  FCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFTILIKCFCSCSKLPFALSTFGKLT 141

Query: 423 VVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQ 482
            +G  PD VT+ TL+        +  A++++ +M      P+  T++ ++N L + G + 
Sbjct: 142 KLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQMFETTCRPNVVTFTTLMNGLCREGRIV 201

Query: 483 AAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAG-FEPDKVTYSIV 541
            A  L   M+  G  P  +TY  ++    K  +  SAL L R M+      P+ V YS +
Sbjct: 202 EAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAI 261

Query: 542 MEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGL 601
           ++ L   G   +A+ +F EM+ K   PD   Y  ++  +  +G    A +  + ML+  +
Sbjct: 262 IDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKI 321

Query: 602 RPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGF 661
            P+V T N+L++AF++ G+  +A  L   ML  G+ P+  TY+ ++            GF
Sbjct: 322 SPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMID-----------GF 370

Query: 662 CHELMAVSGHPAHMFLL 678
           C +    +    HMF L
Sbjct: 371 CKQNRLDAAE--HMFYL 385



 Score =  102 bits (254), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 69/272 (25%), Positives = 125/272 (45%), Gaps = 9/272 (3%)

Query: 382 LLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHA 441
           L   M+R    P+VV + +L+    R    +  + ++++M+      D  ++  LI    
Sbjct: 66  LFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFTILIKCFC 125

Query: 442 KAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLV 501
               L  A+  + K+   GL PD  T++ +++ L     +  A  LF +M    C PN+V
Sbjct: 126 SCSKLPFALSTFGKLTKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQMFETTCRPNVV 185

Query: 502 TYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEM 561
           T+  ++    +      A+ L   M   G +P ++TY  +++  G C   D   A+   +
Sbjct: 186 TFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVD--GMCKKGDTVSAL--NL 241

Query: 562 RRK-----NWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFL 616
            RK     + +P+  +Y  ++D   K G    A   +  M + G+ P++ T NS++  F 
Sbjct: 242 LRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFC 301

Query: 617 RVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
             G+ SDA  LLQ ML   + P + TY  L++
Sbjct: 302 SSGRWSDAEQLLQEMLERKISPDVVTYNALIN 333



 Score = 98.6 bits (244), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 63/246 (25%), Positives = 115/246 (46%), Gaps = 2/246 (0%)

Query: 411 LNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSV 470
           L +A+D+F  M      P  V +C L+ +  +    D+ + +Y+KM+   +  D +++++
Sbjct: 60  LEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFTI 119

Query: 471 IINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAG 530
           +I C      L  A   F ++   G  P++VT+N ++           AL L+  M    
Sbjct: 120 LIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQMFETT 179

Query: 531 FEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAW 590
             P+ VT++ +M  L   G + EA A+   M      P +  YG +VD   K G+   A 
Sbjct: 180 CRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSAL 239

Query: 591 EWYEAMLQAG-LRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTY-TLLLS 648
                M +   + PNV   ++++ +  + G+ SDA +L   M   G+ P L TY ++++ 
Sbjct: 240 NLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVG 299

Query: 649 CCTEAR 654
            C+  R
Sbjct: 300 FCSSGR 305



 Score = 59.3 bits (142), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 50/238 (21%), Positives = 102/238 (42%), Gaps = 9/238 (3%)

Query: 512 KARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEP 571
           + +  + A+ L+ DM  +   P  V +  +M V+      D   +++ +M RK    D  
Sbjct: 56  EIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIY 115

Query: 572 VYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGM 631
            + +L+  +     +  A   +  + + GL P+V T N+LL       ++S+A +L   M
Sbjct: 116 SFTILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQM 175

Query: 632 LNLGLKPSLQTYTLLLS-CCTEARSPYDMGFCHELMAVSGHPAHMFLLSMPSPGPDGQNV 690
                +P++ T+T L++  C E R    +     +M     P  +   ++     DG   
Sbjct: 176 FETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTI----VDGMCK 231

Query: 691 RDHVGSFLEMMHSEDRES----KRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPD 744
           +    S L ++   +  S       +  A++D L K G   +A +++    +K ++PD
Sbjct: 232 KGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPD 289


>gi|227202654|dbj|BAH56800.1| AT2G41720 [Arabidopsis thaliana]
          Length = 815

 Score =  147 bits (370), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 98/364 (26%), Positives = 170/364 (46%), Gaps = 38/364 (10%)

Query: 385 QMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAG 444
           ++ ++ C  N + YN +I  + R N++++A  +F +MQ   C+PD  TY  LI+ H +AG
Sbjct: 134 KIQKNYCARNDI-YNMMIRLHARHNWVDQARGLFFEMQKWSCKPDAETYDALINAHGRAG 192

Query: 445 FLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYN 504
               AM++   M  A ++P   TY+ +IN  G +G+ + A ++  +M + G  P+LVT+N
Sbjct: 193 QWRWAMNLMDDMLRAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHN 252

Query: 505 IMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRK 564
           I+++     R Y  AL  +  M+ A   PD  T++I++  L   G   +A  +F  MR K
Sbjct: 253 IVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREK 312

Query: 565 --NWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLS 622
                PD   +  ++ L+   G +      +EAM+  GL+PN+ + N+L+ A+   G   
Sbjct: 313 RAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSG 372

Query: 623 DAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGFCHELMAVSGHPAHMFLLSMPS 682
            A  +L  +   G+ P + +YT LL+    +R P             G    +FL     
Sbjct: 373 TALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQP-------------GKAKEVFL----- 414

Query: 683 PGPDGQNVRDHVGSFLEMMHSEDRESKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVY 742
                            MM  E R+      +A++D    +G   EA  ++    Q  + 
Sbjct: 415 -----------------MMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIK 457

Query: 743 PDAV 746
           P+ V
Sbjct: 458 PNVV 461



 Score =  141 bits (355), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 90/318 (28%), Positives = 160/318 (50%), Gaps = 11/318 (3%)

Query: 348 NWLRRQAGF---------KHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTY 398
           NW+ +  G          K D  TY  ++   GRA Q+     L+D M+R    P+  TY
Sbjct: 157 NWVDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDMLRAAIAPSRSTY 216

Query: 399 NRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQA 458
           N LI++ G +    EAL+V K+M   G  PD VT+  ++  +        A+  ++ M+ 
Sbjct: 217 NNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKG 276

Query: 459 AGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQ--GCIPNLVTYNIMIALQAKARNY 516
           A + PDT T+++II CL K G    A  LF  M  +   C P++VT+  ++ L +     
Sbjct: 277 AKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEI 336

Query: 517 QSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLL 576
           ++   ++  M   G +P+ V+Y+ +M      G    A +V  ++++   +PD   Y  L
Sbjct: 337 ENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCL 396

Query: 577 VDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGL 636
           ++ +G++    KA E +  M +   +PNV T N+L+ A+   G L++A  + + M   G+
Sbjct: 397 LNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGI 456

Query: 637 KPSLQTYTLLLSCCTEAR 654
           KP++ +   LL+ C+ ++
Sbjct: 457 KPNVVSVCTLLAACSRSK 474



 Score =  107 bits (268), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 93/402 (23%), Positives = 161/402 (40%), Gaps = 105/402 (26%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           +Q G   D  +YT ++   GR+RQ G   ++   M ++  +PNVVTYN LI +YG   +L
Sbjct: 382 KQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFL 441

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTL----------------------------------- 436
            EA+++F+QM+  G +P+ V+ CTL                                   
Sbjct: 442 AEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSA 501

Query: 437 IDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIIN----------------------- 473
           I  +  A  L+ A+ +Y+ M+   +  D+ T++++I+                       
Sbjct: 502 IGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEMEDLSI 561

Query: 474 ------------CLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALK 521
                          K G +  A  +F +M   GC P+++ Y  M+     +  +  A +
Sbjct: 562 PLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHAYNASEKWGKACE 621

Query: 522 LYRDMQNAGFEPDKVTYSIVMEVLGHCG----------YLDEAE-----AVFAEM----- 561
           L  +M+  G EPD +  S +M      G           + E E     AVF E+     
Sbjct: 622 LLLEMEANGIEPDSIACSALMRAFNKGGQPSNVFVLMDLMREKEIPFTGAVFFEIFSACN 681

Query: 562 RRKNWV----------PDEPVYGL-----LVDLWGKAGNVRKAWEWYEAMLQAGLRPNVP 606
             + W           P  P   +     ++ L+GK+G V    + +  ++ +G+  N+ 
Sbjct: 682 TLQEWKRAIDLIQMMDPYLPSLSIGLTNQMLHLFGKSGKVEAMMKLFYKIIASGVGINLK 741

Query: 607 TCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
           T   LL   L VG       +L+ M   G++PS Q Y  ++S
Sbjct: 742 TYAILLEHLLAVGNWRKYIEVLEWMSGAGIQPSNQMYRDIIS 783



 Score =  105 bits (262), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 79/331 (23%), Positives = 144/331 (43%), Gaps = 35/331 (10%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           G K +  +Y  ++G        G    +L  + ++G  P+VV+Y  L++SYGR+    +A
Sbjct: 350 GLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKA 409

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSP----------- 463
            +VF  M+    +P+ VTY  LID +   GFL  A++++++M+  G+ P           
Sbjct: 410 KEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAA 469

Query: 464 ------------------------DTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPN 499
                                   +T  Y+  I     A  L+ A  L+  M  +    +
Sbjct: 470 CSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKAD 529

Query: 500 LVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFA 559
            VT+ I+I+   +   Y  A+   ++M++      K  YS V+      G + EAE++F 
Sbjct: 530 SVTFTILISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFN 589

Query: 560 EMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVG 619
           +M+     PD   Y  ++  +  +    KA E    M   G+ P+   C++L+ AF + G
Sbjct: 590 QMKMAGCEPDVIAYTSMLHAYNASEKWGKACELLLEMEANGIEPDSIACSALMRAFNKGG 649

Query: 620 QLSDAYHLLQGMLNLGLKPSLQTYTLLLSCC 650
           Q S+ + L+  M    +  +   +  + S C
Sbjct: 650 QPSNVFVLMDLMREKEIPFTGAVFFEIFSAC 680



 Score =  102 bits (253), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 74/332 (22%), Positives = 150/332 (45%), Gaps = 9/332 (2%)

Query: 335 KQLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQM--VRDGCQ 392
           K  + ++ AL +F  L + A  + D  T+  ++  L +  Q      L + M   R  C+
Sbjct: 259 KSGRQYSKALSYFE-LMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECR 317

Query: 393 PNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDM 452
           P+VVT+  ++H Y     +     VF+ M   G +P+ V+Y  L+  +A  G    A+ +
Sbjct: 318 PDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSV 377

Query: 453 YKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAK 512
              ++  G+ PD  +Y+ ++N  G++     A ++F  M  +   PN+VTYN +I     
Sbjct: 378 LGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGS 437

Query: 513 ARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPV 572
                 A++++R M+  G +P+ V+   ++            + V +  + +    +   
Sbjct: 438 NGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAA 497

Query: 573 YGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGML 632
           Y   +  +  A  + KA   Y++M +  ++ +  T   L+S   R+ +  +A   L+ M 
Sbjct: 498 YNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEME 557

Query: 633 NLGLKPSLQTYTLLLSC------CTEARSPYD 658
           +L +  + + Y+ +L         TEA S ++
Sbjct: 558 DLSIPLTKEVYSSVLCAYSKQGQVTEAESIFN 589



 Score = 46.6 bits (109), Expect = 0.066,   Method: Compositional matrix adjust.
 Identities = 29/114 (25%), Positives = 57/114 (50%), Gaps = 1/114 (0%)

Query: 538 YSIVMEVLGHCGYLDEAEAVFAEMR-RKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAM 596
           + +++  L   G ++    VF  M+ +KN+     +Y +++ L  +   V +A   +  M
Sbjct: 110 FPVLIRELSRRGCIELCVNVFKWMKIQKNYCARNDIYNMMIRLHARHNWVDQARGLFFEM 169

Query: 597 LQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCC 650
            +   +P+  T ++L++A  R GQ   A +L+  ML   + PS  TY  L++ C
Sbjct: 170 QKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDMLRAAIAPSRSTYNNLINAC 223


>gi|30840327|emb|CAD61286.1| fertility restorer homologue [Raphanus sativus]
 gi|134302843|gb|ABO70665.1| restorer-of-fertility [Raphanus sativus]
 gi|157931526|gb|ABW04887.1| PPR [Raphanus sativus]
 gi|194295008|gb|ABO70666.2| restorer-of-fertility [Raphanus sativus]
          Length = 687

 Score =  147 bits (370), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 116/401 (28%), Positives = 183/401 (45%), Gaps = 20/401 (4%)

Query: 362 TYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQM 421
           T+TT++  L R  +      LLD+M+ DG QP  +TY  ++    +      AL++ ++M
Sbjct: 186 TFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKM 245

Query: 422 QVVG-CEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGH 480
           + V    P+ V Y  +ID   K G    A +++ +MQ  G+ PD FTY+ +I     +G 
Sbjct: 246 EEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGR 305

Query: 481 LQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSI 540
              A QL  EM+ +   P++VTYN +I    K   +  A +LY +M   G  P+ +TYS 
Sbjct: 306 WSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSS 365

Query: 541 VMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAG 600
           +++       LD AE +F  M  K   P+   +  L+D +  A  +    E    M + G
Sbjct: 366 MIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETG 425

Query: 601 LRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTY-TLLLSCCTEARSPYDM 659
           L  +  T N+L+  F  VG L+ A  LLQ M++ GL P + T  TLL   C   +    +
Sbjct: 426 LVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDAL 485

Query: 660 GFCHELMAVSGHPAHMFLLSMPSPG--PDGQNVRDHV------GSFLEMMHSEDRESKRG 711
               E+  V          S P  G  PD Q     +      G FLE     +    RG
Sbjct: 486 ----EMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRG 541

Query: 712 LV------DAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAV 746
           +V       +++D L K    +EA  +++    K+  P+ V
Sbjct: 542 IVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVV 582



 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 98/344 (28%), Positives = 165/344 (47%), Gaps = 21/344 (6%)

Query: 333 VLKQLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQ-------FGAINKLLDQ 385
           V+ +++   + +  +  + R+   + D +++T ++       +       FG I KL   
Sbjct: 88  VVVRMERPDLVISLYQKMERKQ-IRCDIYSFTILIKCFCSCSKLPFALSTFGKITKL--- 143

Query: 386 MVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGF 445
               G  P+VVT+N L+H     + ++EAL++F QM    C P+ VT+ TL++   + G 
Sbjct: 144 ----GLHPDVVTFNTLLHGLCVEDRVSEALNLFHQMFETTCRPNVVTFTTLMNGLCREGR 199

Query: 446 LDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQG-CIPNLVTYN 504
           +  A+ +  +M   GL P   TY  I++ + K G   +A  L  +M      IPN+V Y+
Sbjct: 200 IVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYS 259

Query: 505 IMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHC--GYLDEAEAVFAEMR 562
            +I    K   +  A  L+ +MQ  G  PD  TY+ +  ++G C  G   +AE +  EM 
Sbjct: 260 AIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSM--IVGFCSSGRWSDAEQLLQEML 317

Query: 563 RKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLS 622
            +   PD   Y  L++ + K G   +A E Y+ ML  G+ PN  T +S++  F +  +L 
Sbjct: 318 ERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLD 377

Query: 623 DAYHLLQGMLNLGLKPSLQTY-TLLLSCCTEARSPYDMGFCHEL 665
            A H+   M   G  P+L T+ TL+   C   R    M   HE+
Sbjct: 378 AAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEM 421



 Score =  141 bits (355), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 86/298 (28%), Positives = 149/298 (50%), Gaps = 11/298 (3%)

Query: 362 TYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQM 421
           TY++M+    +  +  A   +   M   GC PN++T+N LI  Y  A  +++ +++  +M
Sbjct: 362 TYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEM 421

Query: 422 QVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHL 481
              G   D  TY TLI      G L+ A+D+ ++M ++GL PD  T   +++ L   G L
Sbjct: 422 TETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKL 481

Query: 482 QAAHQLFCEMVN-----------QGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAG 530
           + A ++F  M              G  P++ TYNI+I+       +  A +LY +M + G
Sbjct: 482 KDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRG 541

Query: 531 FEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAW 590
             PD +TYS +++ L     LDEA  +F  M  K++ P+   +  L++ + KAG V    
Sbjct: 542 IVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGL 601

Query: 591 EWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
           E +  M + G+  N  T  +L+  F +VG ++ A  + Q M++ G+ P   T   +L+
Sbjct: 602 ELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLT 659



 Score =  135 bits (339), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 88/310 (28%), Positives = 152/310 (49%), Gaps = 16/310 (5%)

Query: 353 QAGFKHDEHTYTTMV-GILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           + G +  + TY T+V G+  +     A+N L          PNVV Y+ +I S  +    
Sbjct: 212 EDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRH 271

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
           ++A ++F +MQ  G  PD  TY ++I     +G    A  + ++M    +SPD  TY+ +
Sbjct: 272 SDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNAL 331

Query: 472 INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF 531
           IN   K G    A +L+ EM+ +G IPN +TY+ MI    K     +A  ++  M   G 
Sbjct: 332 INAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGC 391

Query: 532 EPDKVTYSIVMEVLGHCG--YLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKA 589
            P+ +T++ +++  G+CG   +D+   +  EM     V D   Y  L+  +   G++  A
Sbjct: 392 SPNLITFNTLID--GYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAA 449

Query: 590 WEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNL-----------GLKP 638
            +  + M+ +GL P++ TC++LL      G+L DA  + + M              G++P
Sbjct: 450 LDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEP 509

Query: 639 SLQTYTLLLS 648
            +QTY +L+S
Sbjct: 510 DVQTYNILIS 519



 Score =  133 bits (334), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 93/354 (26%), Positives = 161/354 (45%), Gaps = 47/354 (13%)

Query: 340 HTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYN 399
           H+ A   F  ++ +  F  D  TY +M+     + ++    +LL +M+     P+VVTYN
Sbjct: 271 HSDAQNLFTEMQEKGIFP-DLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYN 329

Query: 400 RLIHS-----------------------------------YGRANYLNEALDVFKQMQVV 424
            LI++                                   + + N L+ A  +F  M   
Sbjct: 330 ALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATK 389

Query: 425 GCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAA 484
           GC P+ +T+ TLID +  A  +D  M++  +M   GL  DT TY+ +I+     G L AA
Sbjct: 390 GCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAA 449

Query: 485 HQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNA-----------GFEP 533
             L  EM++ G  P++VT + ++         + AL++++ MQ +           G EP
Sbjct: 450 LDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEP 509

Query: 534 DKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWY 593
           D  TY+I++  L + G   EAE ++ EM  +  VPD   Y  ++D   K   + +A + +
Sbjct: 510 DVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMF 569

Query: 594 EAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
           ++M      PNV T  +L++ + + G++ D   L   M   G+  +  TY  L+
Sbjct: 570 DSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLI 623



 Score =  132 bits (331), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 84/296 (28%), Positives = 148/296 (50%), Gaps = 15/296 (5%)

Query: 349 WLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRA 408
           +L    G   +  T+ T++     A++     +LL +M   G   +  TYN LIH +   
Sbjct: 384 YLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLV 443

Query: 409 NYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAA--------- 459
             LN ALD+ ++M   G  PD VT  TL+D     G L  A++M+K MQ +         
Sbjct: 444 GDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHP 503

Query: 460 --GLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQ 517
             G+ PD  TY+++I+ L   G    A +L+ EM ++G +P+ +TY+ MI    K     
Sbjct: 504 FNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLD 563

Query: 518 SALKLYRDMQNAGFEPDKVTYSIVMEVLGHC--GYLDEAEAVFAEMRRKNWVPDEPVYGL 575
            A +++  M +  F P+ VT++ ++   G+C  G +D+   +F EM R+  V +   Y  
Sbjct: 564 EATQMFDSMGSKSFSPNVVTFTTLIN--GYCKAGRVDDGLELFCEMGRRGIVANAITYIT 621

Query: 576 LVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGM 631
           L+  + K GN+  A + ++ M+ +G+ P+  T  ++L+      +L  A  +L+ +
Sbjct: 622 LICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRAVAMLEKL 677



 Score =  114 bits (285), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 80/317 (25%), Positives = 150/317 (47%), Gaps = 14/317 (4%)

Query: 363 YTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQ 422
           +  ++G++ R  +   +  L  +M R   + ++ ++  LI  +   + L  AL  F ++ 
Sbjct: 82  FCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFTILIKCFCSCSKLPFALSTFGKIT 141

Query: 423 VVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQ 482
            +G  PD VT+ TL+        +  A++++ +M      P+  T++ ++N L + G + 
Sbjct: 142 KLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQMFETTCRPNVVTFTTLMNGLCREGRIV 201

Query: 483 AAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAG-FEPDKVTYSIV 541
            A  L   M+  G  P  +TY  ++    K  +  SAL L R M+      P+ V YS +
Sbjct: 202 EAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAI 261

Query: 542 MEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGL 601
           ++ L   G   +A+ +F EM+ K   PD   Y  ++  +  +G    A +  + ML+  +
Sbjct: 262 IDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKI 321

Query: 602 RPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGF 661
            P+V T N+L++AF++ G+  +A  L   ML  G+ P+  TY+ ++            GF
Sbjct: 322 SPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMID-----------GF 370

Query: 662 CHELMAVSGHPAHMFLL 678
           C +    +    HMF L
Sbjct: 371 CKQNRLDAAE--HMFYL 385



 Score =  102 bits (253), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 69/272 (25%), Positives = 125/272 (45%), Gaps = 9/272 (3%)

Query: 382 LLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHA 441
           L   M+R    P+VV + +L+    R    +  + ++++M+      D  ++  LI    
Sbjct: 66  LFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFTILIKCFC 125

Query: 442 KAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLV 501
               L  A+  + K+   GL PD  T++ +++ L     +  A  LF +M    C PN+V
Sbjct: 126 SCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQMFETTCRPNVV 185

Query: 502 TYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEM 561
           T+  ++    +      A+ L   M   G +P ++TY  +++  G C   D   A+   +
Sbjct: 186 TFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVD--GMCKKGDTVSAL--NL 241

Query: 562 RRK-----NWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFL 616
            RK     + +P+  +Y  ++D   K G    A   +  M + G+ P++ T NS++  F 
Sbjct: 242 LRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFC 301

Query: 617 RVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
             G+ SDA  LLQ ML   + P + TY  L++
Sbjct: 302 SSGRWSDAEQLLQEMLERKISPDVVTYNALIN 333



 Score = 98.6 bits (244), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 63/246 (25%), Positives = 115/246 (46%), Gaps = 2/246 (0%)

Query: 411 LNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSV 470
           L +A+D+F  M      P  V +C L+ +  +    D+ + +Y+KM+   +  D +++++
Sbjct: 60  LEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFTI 119

Query: 471 IINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAG 530
           +I C      L  A   F ++   G  P++VT+N ++           AL L+  M    
Sbjct: 120 LIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQMFETT 179

Query: 531 FEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAW 590
             P+ VT++ +M  L   G + EA A+   M      P +  YG +VD   K G+   A 
Sbjct: 180 CRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSAL 239

Query: 591 EWYEAMLQAG-LRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTY-TLLLS 648
                M +   + PNV   ++++ +  + G+ SDA +L   M   G+ P L TY ++++ 
Sbjct: 240 NLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVG 299

Query: 649 CCTEAR 654
            C+  R
Sbjct: 300 FCSSGR 305



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 50/238 (21%), Positives = 102/238 (42%), Gaps = 9/238 (3%)

Query: 512 KARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEP 571
           + +  + A+ L+ DM  +   P  V +  +M V+      D   +++ +M RK    D  
Sbjct: 56  EIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIY 115

Query: 572 VYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGM 631
            + +L+  +     +  A   +  + + GL P+V T N+LL       ++S+A +L   M
Sbjct: 116 SFTILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQM 175

Query: 632 LNLGLKPSLQTYTLLLS-CCTEARSPYDMGFCHELMAVSGHPAHMFLLSMPSPGPDGQNV 690
                +P++ T+T L++  C E R    +     +M     P  +   ++     DG   
Sbjct: 176 FETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTI----VDGMCK 231

Query: 691 RDHVGSFLEMMHSEDRES----KRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPD 744
           +    S L ++   +  S       +  A++D L K G   +A +++    +K ++PD
Sbjct: 232 KGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPD 289


>gi|134302847|gb|ABO70667.1| restorer-of-fertility [Raphanus sativus]
          Length = 687

 Score =  147 bits (370), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 116/401 (28%), Positives = 183/401 (45%), Gaps = 20/401 (4%)

Query: 362 TYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQM 421
           T+TT++  L R  +      LLD+M+ DG QP  +TY  ++    +      AL++ ++M
Sbjct: 186 TFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKM 245

Query: 422 QVVG-CEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGH 480
           + V    P+ V Y  +ID   K G    A +++ +MQ  G+ PD FTY+ +I     +G 
Sbjct: 246 EEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGR 305

Query: 481 LQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSI 540
              A QL  EM+ +   P++VTYN +I    K   +  A +LY +M   G  P+ +TYS 
Sbjct: 306 WSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSS 365

Query: 541 VMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAG 600
           +++       LD AE +F  M  K   P+   +  L+D +  A  +    E    M + G
Sbjct: 366 MIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETG 425

Query: 601 LRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTY-TLLLSCCTEARSPYDM 659
           L  +  T N+L+  F  VG L+ A  LLQ M++ GL P + T  TLL   C   +    +
Sbjct: 426 LVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDAL 485

Query: 660 GFCHELMAVSGHPAHMFLLSMPSPG--PDGQNVRDHV------GSFLEMMHSEDRESKRG 711
               E+  V          S P  G  PD Q     +      G FLE     +    RG
Sbjct: 486 ----EMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRG 541

Query: 712 LV------DAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAV 746
           +V       +++D L K    +EA  +++    K+  P+ V
Sbjct: 542 IVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVV 582



 Score =  141 bits (355), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 86/298 (28%), Positives = 149/298 (50%), Gaps = 11/298 (3%)

Query: 362 TYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQM 421
           TY++M+    +  +  A   +   M   GC PN++T+N LI  Y  A  +++ +++  +M
Sbjct: 362 TYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEM 421

Query: 422 QVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHL 481
              G   D  TY TLI      G L+ A+D+ ++M ++GL PD  T   +++ L   G L
Sbjct: 422 TETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKL 481

Query: 482 QAAHQLFCEMVN-----------QGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAG 530
           + A ++F  M              G  P++ TYNI+I+       +  A +LY +M + G
Sbjct: 482 KDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRG 541

Query: 531 FEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAW 590
             PD +TYS +++ L     LDEA  +F  M  K++ P+   +  L++ + KAG V    
Sbjct: 542 IVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGL 601

Query: 591 EWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
           E +  M + G+  N  T  +L+  F +VG ++ A  + Q M++ G+ P   T   +L+
Sbjct: 602 ELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLT 659



 Score =  135 bits (339), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 88/310 (28%), Positives = 152/310 (49%), Gaps = 16/310 (5%)

Query: 353 QAGFKHDEHTYTTMV-GILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           + G +  + TY T+V G+  +     A+N L          PNVV Y+ +I S  +    
Sbjct: 212 EDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRH 271

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
           ++A ++F +MQ  G  PD  TY ++I     +G    A  + ++M    +SPD  TY+ +
Sbjct: 272 SDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNAL 331

Query: 472 INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF 531
           IN   K G    A +L+ EM+ +G IPN +TY+ MI    K     +A  ++  M   G 
Sbjct: 332 INAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGC 391

Query: 532 EPDKVTYSIVMEVLGHCG--YLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKA 589
            P+ +T++ +++  G+CG   +D+   +  EM     V D   Y  L+  +   G++  A
Sbjct: 392 SPNLITFNTLID--GYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAA 449

Query: 590 WEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNL-----------GLKP 638
            +  + M+ +GL P++ TC++LL      G+L DA  + + M              G++P
Sbjct: 450 LDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEP 509

Query: 639 SLQTYTLLLS 648
            +QTY +L+S
Sbjct: 510 DVQTYNILIS 519



 Score =  133 bits (334), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 93/354 (26%), Positives = 161/354 (45%), Gaps = 47/354 (13%)

Query: 340 HTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYN 399
           H+ A   F  ++ +  F  D  TY +M+     + ++    +LL +M+     P+VVTYN
Sbjct: 271 HSDAQNLFTEMQEKGIFP-DLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYN 329

Query: 400 RLIHS-----------------------------------YGRANYLNEALDVFKQMQVV 424
            LI++                                   + + N L+ A  +F  M   
Sbjct: 330 ALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATK 389

Query: 425 GCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAA 484
           GC P+ +T+ TLID +  A  +D  M++  +M   GL  DT TY+ +I+     G L AA
Sbjct: 390 GCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAA 449

Query: 485 HQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNA-----------GFEP 533
             L  EM++ G  P++VT + ++         + AL++++ MQ +           G EP
Sbjct: 450 LDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEP 509

Query: 534 DKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWY 593
           D  TY+I++  L + G   EAE ++ EM  +  VPD   Y  ++D   K   + +A + +
Sbjct: 510 DVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMF 569

Query: 594 EAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
           ++M      PNV T  +L++ + + G++ D   L   M   G+  +  TY  L+
Sbjct: 570 DSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLI 623



 Score =  132 bits (331), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 84/296 (28%), Positives = 148/296 (50%), Gaps = 15/296 (5%)

Query: 349 WLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRA 408
           +L    G   +  T+ T++     A++     +LL +M   G   +  TYN LIH +   
Sbjct: 384 YLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLV 443

Query: 409 NYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAA--------- 459
             LN ALD+ ++M   G  PD VT  TL+D     G L  A++M+K MQ +         
Sbjct: 444 GDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHP 503

Query: 460 --GLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQ 517
             G+ PD  TY+++I+ L   G    A +L+ EM ++G +P+ +TY+ MI    K     
Sbjct: 504 FNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLD 563

Query: 518 SALKLYRDMQNAGFEPDKVTYSIVMEVLGHC--GYLDEAEAVFAEMRRKNWVPDEPVYGL 575
            A +++  M +  F P+ VT++ ++   G+C  G +D+   +F EM R+  V +   Y  
Sbjct: 564 EATQMFDSMGSKSFSPNVVTFTTLIN--GYCKAGRVDDGLELFCEMGRRGIVANAITYIT 621

Query: 576 LVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGM 631
           L+  + K GN+  A + ++ M+ +G+ P+  T  ++L+      +L  A  +L+ +
Sbjct: 622 LICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRAVAMLEKL 677



 Score =  117 bits (293), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 81/317 (25%), Positives = 151/317 (47%), Gaps = 14/317 (4%)

Query: 363 YTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQ 422
           +  ++G++ R  +   +  L  +M R   + ++ ++N LI  +   + L  AL  F ++ 
Sbjct: 82  FCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFNILIKCFCSCSKLPFALSTFGKIT 141

Query: 423 VVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQ 482
            +G  PD VT+ TL+        +  A++++ +M      P+  T++ ++N L + G + 
Sbjct: 142 KLGLHPDVVTFTTLLHGLCVEDRVSEALNLFHQMFETTCRPNVVTFTTLMNGLCREGRIV 201

Query: 483 AAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAG-FEPDKVTYSIV 541
            A  L   M+  G  P  +TY  ++    K  +  SAL L R M+      P+ V YS +
Sbjct: 202 EAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAI 261

Query: 542 MEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGL 601
           ++ L   G   +A+ +F EM+ K   PD   Y  ++  +  +G    A +  + ML+  +
Sbjct: 262 IDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKI 321

Query: 602 RPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGF 661
            P+V T N+L++AF++ G+  +A  L   ML  G+ P+  TY+ ++            GF
Sbjct: 322 SPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMID-----------GF 370

Query: 662 CHELMAVSGHPAHMFLL 678
           C +    +    HMF L
Sbjct: 371 CKQNRLDAAE--HMFYL 385



 Score =  101 bits (252), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 69/272 (25%), Positives = 125/272 (45%), Gaps = 9/272 (3%)

Query: 382 LLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHA 441
           L   M+R    P+VV + +L+    R    +  + ++++M+      D  ++  LI    
Sbjct: 66  LFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFNILIKCFC 125

Query: 442 KAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLV 501
               L  A+  + K+   GL PD  T++ +++ L     +  A  LF +M    C PN+V
Sbjct: 126 SCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALNLFHQMFETTCRPNVV 185

Query: 502 TYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEM 561
           T+  ++    +      A+ L   M   G +P ++TY  +++  G C   D   A+   +
Sbjct: 186 TFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVD--GMCKKGDTVSAL--NL 241

Query: 562 RRK-----NWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFL 616
            RK     + +P+  +Y  ++D   K G    A   +  M + G+ P++ T NS++  F 
Sbjct: 242 LRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFC 301

Query: 617 RVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
             G+ SDA  LLQ ML   + P + TY  L++
Sbjct: 302 SSGRWSDAEQLLQEMLERKISPDVVTYNALIN 333



 Score = 95.9 bits (237), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 62/246 (25%), Positives = 114/246 (46%), Gaps = 2/246 (0%)

Query: 411 LNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSV 470
           L +A+D+F  M      P  V +C L+ +  +    D+ + +Y+KM+   +  D +++++
Sbjct: 60  LEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFNI 119

Query: 471 IINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAG 530
           +I C      L  A   F ++   G  P++VT+  ++           AL L+  M    
Sbjct: 120 LIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALNLFHQMFETT 179

Query: 531 FEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAW 590
             P+ VT++ +M  L   G + EA A+   M      P +  YG +VD   K G+   A 
Sbjct: 180 CRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSAL 239

Query: 591 EWYEAMLQAG-LRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTY-TLLLS 648
                M +   + PNV   ++++ +  + G+ SDA +L   M   G+ P L TY ++++ 
Sbjct: 240 NLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVG 299

Query: 649 CCTEAR 654
            C+  R
Sbjct: 300 FCSSGR 305


>gi|357141282|ref|XP_003572167.1| PREDICTED: pentatricopeptide repeat-containing protein At5g12100,
           mitochondrial-like [Brachypodium distachyon]
          Length = 686

 Score =  147 bits (370), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 86/311 (27%), Positives = 149/311 (47%)

Query: 362 TYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQM 421
           TY TM+    +     +  +L  QM+R G +PNV+TYN L+    RA  + E   V  +M
Sbjct: 225 TYNTMIDGHIKKGDLESGFRLWSQMLRHGLKPNVITYNVLLSGLCRAGRMGETAAVLDEM 284

Query: 422 QVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHL 481
                 PD  TY  L D H++ G     + ++++    G+    +T S+++N L K G +
Sbjct: 285 ASRKMVPDGFTYSILFDGHSRTGDSQTMLSLFEESVKKGVKIGAYTCSILLNGLCKDGKI 344

Query: 482 QAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIV 541
             A ++   +VN G +   V YN +I    +  + + A  +++ M++    PD +TY+ +
Sbjct: 345 SKAEEVLQTLVNSGLLQTTVIYNTLINGYCQIGDLEGAFSIFQQMKSRLIRPDHITYNAL 404

Query: 542 MEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGL 601
           +  LG    + EA  +  EM +    P    +  L+D +G+AG + K +     M + GL
Sbjct: 405 INGLGKVERITEAHDLVIEMEKNGVNPSVETFNTLIDAYGRAGQLEKCFIILSDMQEKGL 464

Query: 602 RPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGF 661
           +PNV +  S+++AF + G++ +A  +L  M    + P  Q Y  ++    E  S      
Sbjct: 465 KPNVVSYGSIVNAFCKNGKILEAVAILDDMFIKDVLPGAQVYNAIIDAYIECGSTDQAFM 524

Query: 662 CHELMAVSGHP 672
             E M  SG P
Sbjct: 525 LAEKMKSSGVP 535



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 96/386 (24%), Positives = 185/386 (47%), Gaps = 6/386 (1%)

Query: 359 DEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVF 418
           D  TY+ +     R      +  L ++ V+ G +    T + L++   +   +++A +V 
Sbjct: 292 DGFTYSILFDGHSRTGDSQTMLSLFEESVKKGVKIGAYTCSILLNGLCKDGKISKAEEVL 351

Query: 419 KQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKA 478
           + +   G     V Y TLI+ + + G L+ A  ++++M++  + PD  TY+ +IN LGK 
Sbjct: 352 QTLVNSGLLQTTVIYNTLINGYCQIGDLEGAFSIFQQMKSRLIRPDHITYNALINGLGKV 411

Query: 479 GHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTY 538
             +  AH L  EM   G  P++ T+N +I    +A   +    +  DMQ  G +P+ V+Y
Sbjct: 412 ERITEAHDLVIEMEKNGVNPSVETFNTLIDAYGRAGQLEKCFIILSDMQEKGLKPNVVSY 471

Query: 539 SIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQ 598
             ++      G + EA A+  +M  K+ +P   VY  ++D + + G+  +A+   E M  
Sbjct: 472 GSIVNAFCKNGKILEAVAILDDMFIKDVLPGAQVYNAIIDAYIECGSTDQAFMLAEKMKS 531

Query: 599 AGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTY-TLLLSCCTEARSPY 657
           +G+ P++ T N L+    +  Q+S+A  LL  + N GL P + +Y TL+ +CC  + +  
Sbjct: 532 SGVPPSIVTYNLLIKGLCKQSQISEAEELLDSLRNYGLAPDVISYNTLISACCYRSNTDR 591

Query: 658 DMGFCHELMAVSGHPA-HMFLLSMPSPGPDGQNVRDH-VGSFLEMMHSEDRESKRGLVDA 715
            +    E+      P+   + +   S G  G   R H + +  + M  +D     G+ + 
Sbjct: 592 ALELEKEMWKCGIKPSPRTYRMLFSSLGGAG---RVHEMENLYQQMLDKDVVPCSGIYNI 648

Query: 716 VVDFLHKSGLKEEAGSVWEVAAQKNV 741
           +VD   K G + +  ++ +  + K +
Sbjct: 649 MVDAYAKCGEESKVEALRKEMSDKGI 674



 Score =  124 bits (312), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 81/307 (26%), Positives = 143/307 (46%)

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
           + G K   +T + ++  L +  +     ++L  +V  G     V YN LI+ Y +   L 
Sbjct: 321 KKGVKIGAYTCSILLNGLCKDGKISKAEEVLQTLVNSGLLQTTVIYNTLINGYCQIGDLE 380

Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
            A  +F+QM+     PD +TY  LI+   K   +  A D+  +M+  G++P   T++ +I
Sbjct: 381 GAFSIFQQMKSRLIRPDHITYNALINGLGKVERITEAHDLVIEMEKNGVNPSVETFNTLI 440

Query: 473 NCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFE 532
           +  G+AG L+    +  +M  +G  PN+V+Y  ++    K      A+ +  DM      
Sbjct: 441 DAYGRAGQLEKCFIILSDMQEKGLKPNVVSYGSIVNAFCKNGKILEAVAILDDMFIKDVL 500

Query: 533 PDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEW 592
           P    Y+ +++    CG  D+A  +  +M+     P    Y LL+    K   + +A E 
Sbjct: 501 PGAQVYNAIIDAYIECGSTDQAFMLAEKMKSSGVPPSIVTYNLLIKGLCKQSQISEAEEL 560

Query: 593 YEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTE 652
            +++   GL P+V + N+L+SA         A  L + M   G+KPS +TY +L S    
Sbjct: 561 LDSLRNYGLAPDVISYNTLISACCYRSNTDRALELEKEMWKCGIKPSPRTYRMLFSSLGG 620

Query: 653 ARSPYDM 659
           A   ++M
Sbjct: 621 AGRVHEM 627



 Score =  121 bits (304), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 82/306 (26%), Positives = 147/306 (48%), Gaps = 39/306 (12%)

Query: 377 GAINKLLDQMVRDGCQ----PNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVT 432
           G +++ +  + R GC     PN  +YN +I    +A    +A+ +F +M      P+ +T
Sbjct: 166 GDLDEAVGMLRRMGCDGAPAPNAFSYNVVIAGLWKAGTDCDAVKLFDEMPEKAVVPNHIT 225

Query: 433 YCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMV 492
           Y T+ID H K G L+    ++ +M   GL P+  TY+V+++ L +AG +     +  EM 
Sbjct: 226 YNTMIDGHIKKGDLESGFRLWSQMLRHGLKPNVITYNVLLSGLCRAGRMGETAAVLDEMA 285

Query: 493 NQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVM---------- 542
           ++  +P+  TY+I+    ++  + Q+ L L+ +    G +    T SI++          
Sbjct: 286 SRKMVPDGFTYSILFDGHSRTGDSQTMLSLFEESVKKGVKIGAYTCSILLNGLCKDGKIS 345

Query: 543 ---EVL--------------------GHC--GYLDEAEAVFAEMRRKNWVPDEPVYGLLV 577
              EVL                    G+C  G L+ A ++F +M+ +   PD   Y  L+
Sbjct: 346 KAEEVLQTLVNSGLLQTTVIYNTLINGYCQIGDLEGAFSIFQQMKSRLIRPDHITYNALI 405

Query: 578 DLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLK 637
           +  GK   + +A +    M + G+ P+V T N+L+ A+ R GQL   + +L  M   GLK
Sbjct: 406 NGLGKVERITEAHDLVIEMEKNGVNPSVETFNTLIDAYGRAGQLEKCFIILSDMQEKGLK 465

Query: 638 PSLQTY 643
           P++ +Y
Sbjct: 466 PNVVSY 471



 Score =  121 bits (303), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 71/232 (30%), Positives = 120/232 (51%), Gaps = 1/232 (0%)

Query: 418 FKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGL-SPDTFTYSVIINCLG 476
           F+ +      PD  T+   +     AG LD A+ M ++M   G  +P+ F+Y+V+I  L 
Sbjct: 140 FELLVAARARPDTFTWNKAVQACVVAGDLDEAVGMLRRMGCDGAPAPNAFSYNVVIAGLW 199

Query: 477 KAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKV 536
           KAG    A +LF EM  +  +PN +TYN MI    K  + +S  +L+  M   G +P+ +
Sbjct: 200 KAGTDCDAVKLFDEMPEKAVVPNHITYNTMIDGHIKKGDLESGFRLWSQMLRHGLKPNVI 259

Query: 537 TYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAM 596
           TY++++  L   G + E  AV  EM  +  VPD   Y +L D   + G+ +     +E  
Sbjct: 260 TYNVLLSGLCRAGRMGETAAVLDEMASRKMVPDGFTYSILFDGHSRTGDSQTMLSLFEES 319

Query: 597 LQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
           ++ G++    TC+ LL+   + G++S A  +LQ ++N GL  +   Y  L++
Sbjct: 320 VKKGVKIGAYTCSILLNGLCKDGKISKAEEVLQTLVNSGLLQTTVIYNTLIN 371



 Score = 72.4 bits (176), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 64/299 (21%), Positives = 114/299 (38%), Gaps = 71/299 (23%)

Query: 336 QLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNV 395
           Q+ D   A   F  ++ +   + D  TY  ++  LG+  +    + L+ +M ++G  P+V
Sbjct: 375 QIGDLEGAFSIFQQMKSRL-IRPDHITYNALINGLGKVERITEAHDLVIEMEKNGVNPSV 433

Query: 396 VTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTL------------------- 436
            T+N LI +YGRA  L +   +   MQ  G +P+ V+Y ++                   
Sbjct: 434 ETFNTLIDAYGRAGQLEKCFIILSDMQEKGLKPNVVSYGSIVNAFCKNGKILEAVAILDD 493

Query: 437 ----------------IDIHAKAGFLDVAMDMYKKMQAAG-------------------- 460
                           ID + + G  D A  + +KM+++G                    
Sbjct: 494 MFIKDVLPGAQVYNAIIDAYIECGSTDQAFMLAEKMKSSGVPPSIVTYNLLIKGLCKQSQ 553

Query: 461 ---------------LSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNI 505
                          L+PD  +Y+ +I+      +   A +L  EM   G  P+  TY +
Sbjct: 554 ISEAEELLDSLRNYGLAPDVISYNTLISACCYRSNTDRALELEKEMWKCGIKPSPRTYRM 613

Query: 506 MIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRK 564
           + +    A        LY+ M +    P    Y+I+++    CG   + EA+  EM  K
Sbjct: 614 LFSSLGGAGRVHEMENLYQQMLDKDVVPCSGIYNIMVDAYAKCGEESKVEALRKEMSDK 672


>gi|225423724|ref|XP_002276864.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g35130-like [Vitis vinifera]
          Length = 587

 Score =  147 bits (370), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 74/290 (25%), Positives = 151/290 (52%)

Query: 362 TYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQM 421
           TYT ++ + G+A +     K+  +M    C+PN+ T+  L++++ R     +A ++F+Q+
Sbjct: 275 TYTMLINLYGKASKSYMALKVFHEMRSQKCKPNICTFTALVNAFAREGLCEKAEEIFEQL 334

Query: 422 QVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHL 481
           Q  G EPD   Y  L++ +++AGF   A +++  MQ  G  PD  +Y+++++  G+AG  
Sbjct: 335 QEAGLEPDVYAYNALMEAYSRAGFPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLH 394

Query: 482 QAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIV 541
           + A  +F  M   G  P + ++ ++++  ++A       ++   M  +G +PD    + +
Sbjct: 395 EDAQAVFEVMKRLGITPTMKSHMLLLSAYSRAGKVAKCEEIVNQMHKSGIKPDTFVLNSM 454

Query: 542 MEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGL 601
           + + G  G  ++ E V   M +  +  D   Y +L++++G+AG   +  E + ++    L
Sbjct: 455 LNLYGRLGQFEKMEEVLTAMEKGPYPADISTYNILINIYGRAGFFARMEELFRSLPARNL 514

Query: 602 RPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCT 651
            P+V T  S + A+ R  Q +    + + M++ G  P   T  +LLS C+
Sbjct: 515 IPDVVTWTSRIGAYSRRKQYNRCLEVFEEMIDAGCYPDGGTAKVLLSACS 564



 Score =  142 bits (359), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 82/290 (28%), Positives = 143/290 (49%)

Query: 349 WLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRA 408
           W+  ++ F  D   Y  ++   G+   +        +++   C P   TY  L+ +Y  +
Sbjct: 157 WILYRSSFHPDVICYNLLIDAYGQKSLYKKAESTYLELLEARCVPTEDTYALLLKAYCTS 216

Query: 409 NYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTY 468
             L +A  VF +M+  G  P  V Y   ID   K G    A++++++M+     P T TY
Sbjct: 217 GLLEKAEAVFAEMRKYGFPPSAVVYNAYIDGLMKGGDTQKAVEIFERMKRDRCQPSTATY 276

Query: 469 SVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQN 528
           +++IN  GKA     A ++F EM +Q C PN+ T+  ++   A+    + A +++  +Q 
Sbjct: 277 TMLINLYGKASKSYMALKVFHEMRSQKCKPNICTFTALVNAFAREGLCEKAEEIFEQLQE 336

Query: 529 AGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRK 588
           AG EPD   Y+ +ME     G+   A  +F+ M+     PD   Y ++VD +G+AG    
Sbjct: 337 AGLEPDVYAYNALMEAYSRAGFPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHED 396

Query: 589 AWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKP 638
           A   +E M + G+ P + +   LLSA+ R G+++    ++  M   G+KP
Sbjct: 397 AQAVFEVMKRLGITPTMKSHMLLLSAYSRAGKVAKCEEIVNQMHKSGIKP 446



 Score =  137 bits (344), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 100/401 (24%), Positives = 182/401 (45%), Gaps = 27/401 (6%)

Query: 363 YTTMVGILGRARQFGAINKLLDQMV--------RDGCQPNVVTYNRLIHSYGRANYLNEA 414
           +TT   I+  A Q   +NK  D +V        R    P+V+ YN LI +YG+ +   +A
Sbjct: 129 HTTWDDIINVAVQL-RLNKQWDAIVLICGWILYRSSFHPDVICYNLLIDAYGQKSLYKKA 187

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
              + ++    C P   TY  L+  +  +G L+ A  ++ +M+  G  P    Y+  I+ 
Sbjct: 188 ESTYLELLEARCVPTEDTYALLLKAYCTSGLLEKAEAVFAEMRKYGFPPSAVVYNAYIDG 247

Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPD 534
           L K G  Q A ++F  M    C P+  TY ++I L  KA     ALK++ +M++   +P+
Sbjct: 248 LMKGGDTQKAVEIFERMKRDRCQPSTATYTMLINLYGKASKSYMALKVFHEMRSQKCKPN 307

Query: 535 KVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYE 594
             T++ ++      G  ++AE +F +++     PD   Y  L++ + +AG    A E + 
Sbjct: 308 ICTFTALVNAFAREGLCEKAEEIFEQLQEAGLEPDVYAYNALMEAYSRAGFPYGAAEIFS 367

Query: 595 AMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEAR 654
            M   G  P+  + N ++ A+ R G   DA  + + M  LG+ P+++++ LLLS  + A 
Sbjct: 368 LMQHMGCEPDRASYNIMVDAYGRAGLHEDAQAVFEVMKRLGITPTMKSHMLLLSAYSRAG 427

Query: 655 SPYDMGFCHEL---MAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEM------MHSED 705
               +  C E+   M  SG     F+L+         N+   +G F +M      M    
Sbjct: 428 K---VAKCEEIVNQMHKSGIKPDTFVLN------SMLNLYGRLGQFEKMEEVLTAMEKGP 478

Query: 706 RESKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAV 746
             +     + +++   ++G       ++     +N+ PD V
Sbjct: 479 YPADISTYNILINIYGRAGFFARMEELFRSLPARNLIPDVV 519



 Score =  136 bits (342), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 80/327 (24%), Positives = 161/327 (49%), Gaps = 7/327 (2%)

Query: 322 NYSMDAYQANQVLKQLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINK 381
           N  +DAY    + K+ +   + L        +A     E TY  ++     +        
Sbjct: 172 NLLIDAYGQKSLYKKAESTYLEL-------LEARCVPTEDTYALLLKAYCTSGLLEKAEA 224

Query: 382 LLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHA 441
           +  +M + G  P+ V YN  I    +     +A+++F++M+   C+P   TY  LI+++ 
Sbjct: 225 VFAEMRKYGFPPSAVVYNAYIDGLMKGGDTQKAVEIFERMKRDRCQPSTATYTMLINLYG 284

Query: 442 KAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLV 501
           KA    +A+ ++ +M++    P+  T++ ++N   + G  + A ++F ++   G  P++ 
Sbjct: 285 KASKSYMALKVFHEMRSQKCKPNICTFTALVNAFAREGLCEKAEEIFEQLQEAGLEPDVY 344

Query: 502 TYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEM 561
            YN ++   ++A     A +++  MQ+ G EPD+ +Y+I+++  G  G  ++A+AVF  M
Sbjct: 345 AYNALMEAYSRAGFPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHEDAQAVFEVM 404

Query: 562 RRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQL 621
           +R    P    + LL+  + +AG V K  E    M ++G++P+    NS+L+ + R+GQ 
Sbjct: 405 KRLGITPTMKSHMLLLSAYSRAGKVAKCEEIVNQMHKSGIKPDTFVLNSMLNLYGRLGQF 464

Query: 622 SDAYHLLQGMLNLGLKPSLQTYTLLLS 648
                +L  M        + TY +L++
Sbjct: 465 EKMEEVLTAMEKGPYPADISTYNILIN 491



 Score = 95.1 bits (235), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 66/292 (22%), Positives = 120/292 (41%), Gaps = 71/292 (24%)

Query: 342 VALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRL 401
           +AL  F+ +R Q   K +  T+T +V    R        ++ +Q+   G +P+V  YN L
Sbjct: 291 MALKVFHEMRSQKC-KPNICTFTALVNAFAREGLCEKAEEIFEQLQEAGLEPDVYAYNAL 349

Query: 402 IHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYK------- 454
           + +Y RA +   A ++F  MQ +GCEPDR +Y  ++D + +AG  + A  +++       
Sbjct: 350 MEAYSRAGFPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHEDAQAVFEVMKRLGI 409

Query: 455 ----------------------------KMQAAGLSPDTF-------------------- 466
                                       +M  +G+ PDTF                    
Sbjct: 410 TPTMKSHMLLLSAYSRAGKVAKCEEIVNQMHKSGIKPDTFVLNSMLNLYGRLGQFEKMEE 469

Query: 467 ---------------TYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQA 511
                          TY+++IN  G+AG      +LF  +  +  IP++VT+   I   +
Sbjct: 470 VLTAMEKGPYPADISTYNILINIYGRAGFFARMEELFRSLPARNLIPDVVTWTSRIGAYS 529

Query: 512 KARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRR 563
           + + Y   L+++ +M +AG  PD  T  +++    +   + E   V   M +
Sbjct: 530 RRKQYNRCLEVFEEMIDAGCYPDGGTAKVLLSACSNGDQIQEVTTVIRTMHK 581


>gi|449493486|ref|XP_004159312.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g22960, mitochondrial-like [Cucumis sativus]
          Length = 772

 Score =  147 bits (370), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 93/338 (27%), Positives = 164/338 (48%), Gaps = 3/338 (0%)

Query: 313 LAEEALGNTNYSMDAYQANQVLKQLQDHTVALGFFNWLRRQAGFKH--DEHTYTTMVGIL 370
           L EE L N+  ++ AY  N ++       + +  F+ +      +      TY T++  L
Sbjct: 272 LIEEML-NSGLNVSAYTYNPLINGFCQKGLFVEAFDLVEEMVNRRAFPTLSTYNTLMYGL 330

Query: 371 GRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDR 430
            +  Q   +      M++    P++V++N L++ Y R   ++EA  +F +++     P  
Sbjct: 331 CKWVQVTGVRLRFSDMLKSKFTPDIVSFNSLLYGYCRTGCISEAFLLFDELKCRDLVPTV 390

Query: 431 VTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCE 490
           +TY TLI      G+LD A+ + K+M   GL PD FTY++++N   K G++  A   F E
Sbjct: 391 ITYNTLIHGLCMWGYLDAALRLKKEMTDQGLFPDIFTYTILVNGCFKLGYVSMARGFFNE 450

Query: 491 MVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGY 550
           M+++G  P+   YN  I  + K  +   A  +  +M  AGF PD +TY++ +  L   G 
Sbjct: 451 MLSKGLKPDRFAYNTRIVGEMKIADTSVAFSMQEEMLAAGFPPDVITYNVFVHALCQQGN 510

Query: 551 LDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNS 610
            +EA  +   M     +PD   Y  +++ + K G++RKA E +  ML  G+ P+V T   
Sbjct: 511 FEEACDLLENMVSDGLIPDHVTYTSIINGFVKNGHLRKAREVFNEMLSKGVAPSVVTYTV 570

Query: 611 LLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
           L+ A      L  A+     ML   +  ++ TY  +++
Sbjct: 571 LIHAHAAKQMLDLAFMYFSKMLEKSVPANVITYNAIIN 608



 Score =  139 bits (350), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 101/358 (28%), Positives = 169/358 (47%), Gaps = 27/358 (7%)

Query: 342 VALGFFNWLRRQAGFKHDEHTYTTMVGIL-------------GRARQF---GAINKLL-- 383
           VAL FF W+  Q  FK  E  +  ++ IL              R   F   G ++ L+  
Sbjct: 101 VALRFFRWVMAQPDFKESEFVFCAILDILVGNDLMHAAYWVMERVVSFEMHGVVDVLIAG 160

Query: 384 --------DQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCT 435
                   D+M+R+G  P+V   NR++      N L++A +V+  M+  G +P  VTY T
Sbjct: 161 HVXCLLVFDKMIRNGLLPDVKNCNRILRVLRDENLLSKAKNVYGMMEQFGIKPTVVTYNT 220

Query: 436 LIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQG 495
           ++D + K G +D A+++  +MQ  G  P+  TY+V++N L K G L+ A  L  EM+N G
Sbjct: 221 MLDSYCKEGRVDQALELLSEMQERGCYPNDVTYNVLVNGLSKKGELEQAKGLIEEMLNSG 280

Query: 496 CIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAE 555
              +  TYN +I    +   +  A  L  +M N    P   TY+ +M  L     +    
Sbjct: 281 LNVSAYTYNPLINGFCQKGLFVEAFDLVEEMVNRRAFPTLSTYNTLMYGLCKWVQVTGVR 340

Query: 556 AVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAF 615
             F++M +  + PD   +  L+  + + G + +A+  ++ +    L P V T N+L+   
Sbjct: 341 LRFSDMLKSKFTPDIVSFNSLLYGYCRTGCISEAFLLFDELKCRDLVPTVITYNTLIHGL 400

Query: 616 LRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTE-ARSPYDMGFCHELMAVSGHP 672
              G L  A  L + M + GL P + TYT+L++ C +        GF +E+++    P
Sbjct: 401 CMWGYLDAALRLKKEMTDQGLFPDIFTYTILVNGCFKLGYVSMARGFFNEMLSKGLKP 458



 Score =  129 bits (324), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 78/267 (29%), Positives = 131/267 (49%)

Query: 382 LLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHA 441
           L D++      P V+TYN LIH      YL+ AL + K+M   G  PD  TY  L++   
Sbjct: 377 LFDELKCRDLVPTVITYNTLIHGLCMWGYLDAALRLKKEMTDQGLFPDIFTYTILVNGCF 436

Query: 442 KAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLV 501
           K G++ +A   + +M + GL PD F Y+  I    K      A  +  EM+  G  P+++
Sbjct: 437 KLGYVSMARGFFNEMLSKGLKPDRFAYNTRIVGEMKIADTSVAFSMQEEMLAAGFPPDVI 496

Query: 502 TYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEM 561
           TYN+ +    +  N++ A  L  +M + G  PD VTY+ ++      G+L +A  VF EM
Sbjct: 497 TYNVFVHALCQQGNFEEACDLLENMVSDGLIPDHVTYTSIINGFVKNGHLRKAREVFNEM 556

Query: 562 RRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQL 621
             K   P    Y +L+        +  A+ ++  ML+  +  NV T N++++      ++
Sbjct: 557 LSKGVAPSVVTYTVLIHAHAAKQMLDLAFMYFSKMLEKSVPANVITYNAIINGLCMTRRM 616

Query: 622 SDAYHLLQGMLNLGLKPSLQTYTLLLS 648
            +AY     M   G+ P+  +YT+L++
Sbjct: 617 DEAYKYFDEMEEKGILPNKFSYTILIN 643



 Score =  119 bits (297), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 78/286 (27%), Positives = 141/286 (49%)

Query: 362 TYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQM 421
           TY T++  L       A  +L  +M   G  P++ TY  L++   +  Y++ A   F +M
Sbjct: 392 TYNTLIHGLCMWGYLDAALRLKKEMTDQGLFPDIFTYTILVNGCFKLGYVSMARGFFNEM 451

Query: 422 QVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHL 481
              G +PDR  Y T I    K     VA  M ++M AAG  PD  TY+V ++ L + G+ 
Sbjct: 452 LSKGLKPDRFAYNTRIVGEMKIADTSVAFSMQEEMLAAGFPPDVITYNVFVHALCQQGNF 511

Query: 482 QAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIV 541
           + A  L   MV+ G IP+ VTY  +I    K  + + A +++ +M + G  P  VTY+++
Sbjct: 512 EEACDLLENMVSDGLIPDHVTYTSIINGFVKNGHLRKAREVFNEMLSKGVAPSVVTYTVL 571

Query: 542 MEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGL 601
           +        LD A   F++M  K+   +   Y  +++       + +A+++++ M + G+
Sbjct: 572 IHAHAAKQMLDLAFMYFSKMLEKSVPANVITYNAIINGLCMTRRMDEAYKYFDEMEEKGI 631

Query: 602 RPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
            PN  +   L++    +G   +A  L + ML+  ++P   T+++ L
Sbjct: 632 LPNKFSYTILINESCNMGYWEEALRLYREMLDRKIQPDSFTHSVFL 677



 Score =  119 bits (297), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 94/360 (26%), Positives = 153/360 (42%), Gaps = 37/360 (10%)

Query: 326 DAYQANQVLKQLQDHTVALGFFNW--LRRQAGFKHDEHTYTTMVGILGRARQFGAINKLL 383
           D    N++L+ L+D  +     N   +  Q G K    TY TM+    +  +     +LL
Sbjct: 179 DVKNCNRILRVLRDENLLSKAKNVYGMMEQFGIKPTVVTYNTMLDSYCKEGRVDQALELL 238

Query: 384 DQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKA 443
            +M   GC PN VTYN L++   +   L +A  + ++M   G      TY  LI+   + 
Sbjct: 239 SEMQERGCYPNDVTYNVLVNGLSKKGELEQAKGLIEEMLNSGLNVSAYTYNPLINGFCQK 298

Query: 444 GFLDVAMDMYKKM-----------------------QAAG------------LSPDTFTY 468
           G    A D+ ++M                       Q  G             +PD  ++
Sbjct: 299 GLFVEAFDLVEEMVNRRAFPTLSTYNTLMYGLCKWVQVTGVRLRFSDMLKSKFTPDIVSF 358

Query: 469 SVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQN 528
           + ++    + G +  A  LF E+  +  +P ++TYN +I          +AL+L ++M +
Sbjct: 359 NSLLYGYCRTGCISEAFLLFDELKCRDLVPTVITYNTLIHGLCMWGYLDAALRLKKEMTD 418

Query: 529 AGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRK 588
            G  PD  TY+I++      GY+  A   F EM  K   PD   Y   +    K  +   
Sbjct: 419 QGLFPDIFTYTILVNGCFKLGYVSMARGFFNEMLSKGLKPDRFAYNTRIVGEMKIADTSV 478

Query: 589 AWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
           A+   E ML AG  P+V T N  + A  + G   +A  LL+ M++ GL P   TYT +++
Sbjct: 479 AFSMQEEMLAAGFPPDVITYNVFVHALCQQGNFEEACDLLENMVSDGLIPDHVTYTSIIN 538



 Score =  116 bits (290), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 66/192 (34%), Positives = 99/192 (51%)

Query: 354 AGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNE 413
           AGF  D  TY   V  L +   F     LL+ MV DG  P+ VTY  +I+ + +  +L +
Sbjct: 489 AGFPPDVITYNVFVHALCQQGNFEEACDLLENMVSDGLIPDHVTYTSIINGFVKNGHLRK 548

Query: 414 ALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIIN 473
           A +VF +M   G  P  VTY  LI  HA    LD+A   + KM    +  +  TY+ IIN
Sbjct: 549 AREVFNEMLSKGVAPSVVTYTVLIHAHAAKQMLDLAFMYFSKMLEKSVPANVITYNAIIN 608

Query: 474 CLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEP 533
            L     +  A++ F EM  +G +PN  +Y I+I        ++ AL+LYR+M +   +P
Sbjct: 609 GLCMTRRMDEAYKYFDEMEEKGILPNKFSYTILINESCNMGYWEEALRLYREMLDRKIQP 668

Query: 534 DKVTYSIVMEVL 545
           D  T+S+ ++ L
Sbjct: 669 DSFTHSVFLKNL 680



 Score =  110 bits (274), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 72/256 (28%), Positives = 120/256 (46%), Gaps = 12/256 (4%)

Query: 355 GFKHDEHTYTTMV------GILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRA 408
           G   D  TYT +V      G +  AR F       ++M+  G +P+   YN  I    + 
Sbjct: 420 GLFPDIFTYTILVNGCFKLGYVSMARGF------FNEMLSKGLKPDRFAYNTRIVGEMKI 473

Query: 409 NYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTY 468
              + A  + ++M   G  PD +TY   +    + G  + A D+ + M + GL PD  TY
Sbjct: 474 ADTSVAFSMQEEMLAAGFPPDVITYNVFVHALCQQGNFEEACDLLENMVSDGLIPDHVTY 533

Query: 469 SVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQN 528
           + IIN   K GHL+ A ++F EM+++G  P++VTY ++I   A  +    A   +  M  
Sbjct: 534 TSIINGFVKNGHLRKAREVFNEMLSKGVAPSVVTYTVLIHAHAAKQMLDLAFMYFSKMLE 593

Query: 529 AGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRK 588
                + +TY+ ++  L     +DEA   F EM  K  +P++  Y +L++     G   +
Sbjct: 594 KSVPANVITYNAIINGLCMTRRMDEAYKYFDEMEEKGILPNKFSYTILINESCNMGYWEE 653

Query: 589 AWEWYEAMLQAGLRPN 604
           A   Y  ML   ++P+
Sbjct: 654 ALRLYREMLDRKIQPD 669


>gi|359482557|ref|XP_002277683.2| PREDICTED: pentatricopeptide repeat-containing protein At5g39710
           [Vitis vinifera]
          Length = 990

 Score =  147 bits (370), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 66/183 (36%), Positives = 115/183 (62%)

Query: 359 DEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVF 418
           D   Y T++  LG+ ++   ++ L ++M +DG  P++ +YN LI S+GRA  + EA+ +F
Sbjct: 283 DTVMYNTVLSALGKLKKTSDLHDLYEKMKQDGPSPDIFSYNILISSFGRAGRVEEAVKIF 342

Query: 419 KQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKA 478
           ++++   C+PD +++ +LI+   K G +D A   +K+M+  GLSPD  TYS +I C GK 
Sbjct: 343 EELENSSCKPDIISFNSLINCLGKNGDIDEAHMRFKEMREEGLSPDVVTYSTLIECFGKT 402

Query: 479 GHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTY 538
             ++ A +LF EM+ +GC PN+VTYNI++    ++     A+ LY  ++  G  PD +TY
Sbjct: 403 DKVEMACRLFDEMLAEGCSPNIVTYNILLDCLERSGRTAEAVDLYAKLKQQGLTPDSITY 462

Query: 539 SIV 541
           +++
Sbjct: 463 AVL 465



 Score =  140 bits (352), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 88/326 (26%), Positives = 151/326 (46%), Gaps = 32/326 (9%)

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTY-------------- 398
           + G+  +   Y TM+  L   R       L  +MV + C+PN  T+              
Sbjct: 140 EKGYTPNLIAYNTMIQALANNRMVDKTIFLFSKMVENNCRPNGFTFSVILNVLVAEGQLG 199

Query: 399 -------------NRLIHSY-----GRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIH 440
                        N+ I++Y      +  + +EA  +F  M     E DR  Y ++++  
Sbjct: 200 RLDEVVEVSNKFMNKSIYAYLVRTLSKLGHASEAHRLFCNMWSFHDEGDRDAYMSMLESL 259

Query: 441 AKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNL 500
             AG    A+D+  K+    +S DT  Y+ +++ LGK       H L+ +M   G  P++
Sbjct: 260 CDAGKTTEALDLLSKIHEKRISTDTVMYNTVLSALGKLKKTSDLHDLYEKMKQDGPSPDI 319

Query: 501 VTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAE 560
            +YNI+I+   +A   + A+K++ +++N+  +PD ++++ ++  LG  G +DEA   F E
Sbjct: 320 FSYNILISSFGRAGRVEEAVKIFEELENSSCKPDIISFNSLINCLGKNGDIDEAHMRFKE 379

Query: 561 MRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQ 620
           MR +   PD   Y  L++ +GK   V  A   ++ ML  G  PN+ T N LL    R G+
Sbjct: 380 MREEGLSPDVVTYSTLIECFGKTDKVEMACRLFDEMLAEGCSPNIVTYNILLDCLERSGR 439

Query: 621 LSDAYHLLQGMLNLGLKPSLQTYTLL 646
            ++A  L   +   GL P   TY +L
Sbjct: 440 TAEAVDLYAKLKQQGLTPDSITYAVL 465



 Score =  130 bits (328), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 89/365 (24%), Positives = 154/365 (42%), Gaps = 67/365 (18%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           R+ G+K D   Y  ++  L +  +   +  +   M R  C+P+  TY  +I   G+    
Sbjct: 69  RRRGYKLDIFAYNMLLDALAKDNKVDQVYMVFKDMKRKHCEPDEYTYTIMIRMTGKIGKA 128

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
           +E+L +F++M   G  P+ + Y T+I   A    +D  + ++ KM      P+ FT+SVI
Sbjct: 129 DESLTLFQEMTEKGYTPNLIAYNTMIQALANNRMVDKTIFLFSKMVENNCRPNGFTFSVI 188

Query: 472 INC--------------------------------LGKAGHLQAAHQLFCEM-------- 491
           +N                                 L K GH   AH+LFC M        
Sbjct: 189 LNVLVAEGQLGRLDEVVEVSNKFMNKSIYAYLVRTLSKLGHASEAHRLFCNMWSFHDEGD 248

Query: 492 --------------------------VNQGCI-PNLVTYNIMIALQAKARNYQSALKLYR 524
                                     +++  I  + V YN +++   K +       LY 
Sbjct: 249 RDAYMSMLESLCDAGKTTEALDLLSKIHEKRISTDTVMYNTVLSALGKLKKTSDLHDLYE 308

Query: 525 DMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAG 584
            M+  G  PD  +Y+I++   G  G ++EA  +F E+   +  PD   +  L++  GK G
Sbjct: 309 KMKQDGPSPDIFSYNILISSFGRAGRVEEAVKIFEELENSSCKPDIISFNSLINCLGKNG 368

Query: 585 NVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYT 644
           ++ +A   ++ M + GL P+V T ++L+  F +  ++  A  L   ML  G  P++ TY 
Sbjct: 369 DIDEAHMRFKEMREEGLSPDVVTYSTLIECFGKTDKVEMACRLFDEMLAEGCSPNIVTYN 428

Query: 645 LLLSC 649
           +LL C
Sbjct: 429 ILLDC 433



 Score =  115 bits (288), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 100/402 (24%), Positives = 178/402 (44%), Gaps = 20/402 (4%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
            + G +    T   ++GI G       + +  D + +   Q N  TY  L+ ++ R+N  
Sbjct: 2   ERCGVRGSISTINILIGIFGGG---ADVERCFDLVKKWDLQMNCYTYKCLLQAHLRSNNS 58

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
           N+A +V+ +++  G + D   Y  L+D  AK   +D    ++K M+     PD +TY+++
Sbjct: 59  NKAFEVYVELRRRGYKLDIFAYNMLLDALAKDNKVDQVYMVFKDMKRKHCEPDEYTYTIM 118

Query: 472 INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF 531
           I   GK G    +  LF EM  +G  PNL+ YN MI   A  R     + L+  M     
Sbjct: 119 IRMTGKIGKADESLTLFQEMTEKGYTPNLIAYNTMIQALANNRMVDKTIFLFSKMVENNC 178

Query: 532 EPDKVTYSIVMEVL---GHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRK 588
            P+  T+S+++ VL   G  G LDE   V       N   ++ +Y  LV    K G+  +
Sbjct: 179 RPNGFTFSVILNVLVAEGQLGRLDEVVEV------SNKFMNKSIYAYLVRTLSKLGHASE 232

Query: 589 AWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
           A   +  M       +     S+L +    G+ ++A  LL  +    +      Y  +LS
Sbjct: 233 AHRLFCNMWSFHDEGDRDAYMSMLESLCDAGKTTEALDLLSKIHEKRISTDTVMYNTVLS 292

Query: 649 CCTEARSPYDMGFCHELMAVSGHPAHMFL--LSMPSPGPDGQNVRDHVGSFLEMMHSEDR 706
              + +   D+   +E M   G    +F   + + S G  G+ V + V  F E+   E+ 
Sbjct: 293 ALGKLKKTSDLHDLYEKMKQDGPSPDIFSYNILISSFGRAGR-VEEAVKIFEEL---ENS 348

Query: 707 ESKRGLV--DAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAV 746
             K  ++  +++++ L K+G  +EA   ++   ++ + PD V
Sbjct: 349 SCKPDIISFNSLINCLGKNGDIDEAHMRFKEMREEGLSPDVV 390



 Score =  105 bits (261), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 49/160 (30%), Positives = 93/160 (58%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           +Q G   D  +Y  ++   GRA +     K+ +++    C+P+++++N LI+  G+   +
Sbjct: 311 KQDGPSPDIFSYNILISSFGRAGRVEEAVKIFEELENSSCKPDIISFNSLINCLGKNGDI 370

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
           +EA   FK+M+  G  PD VTY TLI+   K   +++A  ++ +M A G SP+  TY+++
Sbjct: 371 DEAHMRFKEMREEGLSPDVVTYSTLIECFGKTDKVEMACRLFDEMLAEGCSPNIVTYNIL 430

Query: 472 INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQA 511
           ++CL ++G    A  L+ ++  QG  P+ +TY ++  LQ+
Sbjct: 431 LDCLERSGRTAEAVDLYAKLKQQGLTPDSITYAVLERLQS 470


>gi|359488009|ref|XP_003633686.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 579

 Score =  147 bits (370), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 90/289 (31%), Positives = 150/289 (51%)

Query: 359 DEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVF 418
           D  ++ T+V  L +  +    + ++D+M++ G +PNVVTY  L+  +   + ++EA+ VF
Sbjct: 270 DVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGVEPNVVTYTALMDGHCLLSEMDEAVKVF 329

Query: 419 KQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKA 478
             M   GC P+ ++Y TLI+ + K   +D AM ++ +M    L PDT TYS +I+ L   
Sbjct: 330 DTMVCKGCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHV 389

Query: 479 GHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTY 538
             LQ A  LF EMV    IPNLVTY I++    K R    A+ L + ++ +  +PD    
Sbjct: 390 ERLQDAIALFHEMVACSQIPNLVTYRILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQVN 449

Query: 539 SIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQ 598
           +I ++ +   G L+ A  +F+ +  K   PD   Y ++++   + G + +A + +  M +
Sbjct: 450 NIAIDGMCRAGELEAARDLFSNLSSKGLQPDVWTYSIMINGLCRRGLLDEASKLFREMDE 509

Query: 599 AGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
            G   N    N++   FLR  + S A  LLQ M+  G      T TL +
Sbjct: 510 NGCTLNGCIYNTITRGFLRNNETSRAIQLLQEMVARGFSADASTMTLFV 558



 Score =  142 bits (358), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 95/341 (27%), Positives = 162/341 (47%), Gaps = 36/341 (10%)

Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLI 402
           AL  F+ +  + GF+ D  TY T++  L +     A  +LL  MV+  CQPNV  YN +I
Sbjct: 150 ALHLFDKMIGE-GFRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTII 208

Query: 403 HSYGRANYLNEALDVFKQMQVVG------------------CE----------------- 427
            S  +   + EA ++F +M   G                  CE                 
Sbjct: 209 DSLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIM 268

Query: 428 PDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQL 487
           PD V++ T++D   K G +  A D+  KM   G+ P+  TY+ +++       +  A ++
Sbjct: 269 PDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGVEPNVVTYTALMDGHCLLSEMDEAVKV 328

Query: 488 FCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGH 547
           F  MV +GC+PN+++YN +I    K +    A+ L+ +M      PD VTYS ++  L H
Sbjct: 329 FDTMVCKGCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCH 388

Query: 548 CGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPT 607
              L +A A+F EM   + +P+   Y +L+D   K   + +A    +A+  + L P++  
Sbjct: 389 VERLQDAIALFHEMVACSQIPNLVTYRILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQV 448

Query: 608 CNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
            N  +    R G+L  A  L   + + GL+P + TY+++++
Sbjct: 449 NNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVWTYSIMIN 489



 Score =  136 bits (343), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 92/313 (29%), Positives = 155/313 (49%), Gaps = 7/313 (2%)

Query: 340 HTVALGF-FNWLRR--QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVV 396
           H   +GF F+ L +  + G + D  T+TT++  +    + G    L D+M+ +G +P+VV
Sbjct: 108 HLNRVGFAFSVLAKILKLGHQPDTATFTTLIRGIYVEGKIGEALHLFDKMIGEGFRPDVV 167

Query: 397 TYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKM 456
           TY  LI+   +    + A+ +   M    C+P+   Y T+ID   K   +  A +++ +M
Sbjct: 168 TYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEM 227

Query: 457 QAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNY 516
              G+SPD FTY+ +I+ L      +    L  EMV+   +P++V++N ++    K    
Sbjct: 228 VTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVVDALCKEGKV 287

Query: 517 QSALKLYRDMQNAGFEPDKVTYSIVMEVLGHC--GYLDEAEAVFAEMRRKNWVPDEPVYG 574
             A  +   M   G EP+ VTY+ +M+  GHC    +DEA  VF  M  K  +P+   Y 
Sbjct: 288 TEAHDVVDKMIQRGVEPNVVTYTALMD--GHCLLSEMDEAVKVFDTMVCKGCMPNVISYN 345

Query: 575 LLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNL 634
            L++ + K   + KA   +  M +  L P+  T ++L+     V +L DA  L   M+  
Sbjct: 346 TLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALFHEMVAC 405

Query: 635 GLKPSLQTYTLLL 647
              P+L TY +LL
Sbjct: 406 SQIPNLVTYRILL 418



 Score =  135 bits (339), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 85/291 (29%), Positives = 143/291 (49%), Gaps = 1/291 (0%)

Query: 341 TVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNR 400
           T A   F+ +  + G   D  TY +++  L    ++  +  LL++MV     P+VV++N 
Sbjct: 218 TEAFNLFSEMVTK-GISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNT 276

Query: 401 LIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAG 460
           ++ +  +   + EA DV  +M   G EP+ VTY  L+D H     +D A+ ++  M   G
Sbjct: 277 VVDALCKEGKVTEAHDVVDKMIQRGVEPNVVTYTALMDGHCLLSEMDEAVKVFDTMVCKG 336

Query: 461 LSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSAL 520
             P+  +Y+ +IN   K   +  A  LF EM  Q  IP+ VTY+ +I         Q A+
Sbjct: 337 CMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAI 396

Query: 521 KLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLW 580
            L+ +M      P+ VTY I+++ L    YL EA A+   +   N  PD  V  + +D  
Sbjct: 397 ALFHEMVACSQIPNLVTYRILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQVNNIAIDGM 456

Query: 581 GKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGM 631
            +AG +  A + +  +   GL+P+V T + +++   R G L +A  L + M
Sbjct: 457 CRAGELEAARDLFSNLSSKGLQPDVWTYSIMINGLCRRGLLDEASKLFREM 507



 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 100/385 (25%), Positives = 172/385 (44%), Gaps = 6/385 (1%)

Query: 363 YTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQ 422
           +  ++  + + +    +  L  QM   G  PN+ T + LI+S+   N +  A  V  ++ 
Sbjct: 64  FNKLLTSIAKMKHHSTLLSLSHQMDSFGIPPNIYTLHILINSFCHLNRVGFAFSVLAKIL 123

Query: 423 VVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQ 482
            +G +PD  T+ TLI      G +  A+ ++ KM   G  PD  TY  +IN L K G+  
Sbjct: 124 KLGHQPDTATFTTLIRGIYVEGKIGEALHLFDKMIGEGFRPDVVTYGTLINGLCKVGNTS 183

Query: 483 AAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVM 542
           AA +L   MV + C PN+  YN +I    K R    A  L+ +M   G  PD  TY+ ++
Sbjct: 184 AAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLI 243

Query: 543 EVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLR 602
             L +         +  EM     +PD   +  +VD   K G V +A +  + M+Q G+ 
Sbjct: 244 HALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGVE 303

Query: 603 PNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTY-TLLLSCCTEARSPYDMGF 661
           PNV T  +L+     + ++ +A  +   M+  G  P++ +Y TL+   C   R    M  
Sbjct: 304 PNVVTYTALMDGHCLLSEMDEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAMYL 363

Query: 662 CHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRESKRGLVD--AVVDF 719
             E+      P  +   ++       + ++D +  F EM+      +   LV    ++D+
Sbjct: 364 FGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALFHEMVACSQIPN---LVTYRILLDY 420

Query: 720 LHKSGLKEEAGSVWEVAAQKNVYPD 744
           L K+    EA ++ +     N+ PD
Sbjct: 421 LCKNRYLAEAMALLKAIEGSNLDPD 445



 Score =  128 bits (321), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 97/386 (25%), Positives = 173/386 (44%), Gaps = 13/386 (3%)

Query: 288 SRHFASTGNVVESVSRILRQWKWGPLAEEALGNTNYSMDAYQANQVLKQLQDHTVALGFF 347
           S HF +    + S +R+LR                 ++D  +    + +++ H+  L   
Sbjct: 36  SLHFNTIDGAISSFNRMLRMQPPPS-----------TVDFNKLLTSIAKMKHHSTLLSLS 84

Query: 348 NWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGR 407
           + +    G   + +T   ++       + G    +L ++++ G QP+  T+  LI     
Sbjct: 85  HQMD-SFGIPPNIYTLHILINSFCHLNRVGFAFSVLAKILKLGHQPDTATFTTLIRGIYV 143

Query: 408 ANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFT 467
              + EAL +F +M   G  PD VTY TLI+   K G    A+ +   M      P+ F 
Sbjct: 144 EGKIGEALHLFDKMIGEGFRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFA 203

Query: 468 YSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQ 527
           Y+ II+ L K   +  A  LF EMV +G  P++ TYN +I        ++    L  +M 
Sbjct: 204 YNTIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMV 263

Query: 528 NAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVR 587
           ++   PD V+++ V++ L   G + EA  V  +M ++   P+   Y  L+D       + 
Sbjct: 264 DSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGVEPNVVTYTALMDGHCLLSEMD 323

Query: 588 KAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTY-TLL 646
           +A + ++ M+  G  PNV + N+L++ + ++ ++  A +L   M    L P   TY TL+
Sbjct: 324 EAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLI 383

Query: 647 LSCCTEARSPYDMGFCHELMAVSGHP 672
              C   R    +   HE++A S  P
Sbjct: 384 HGLCHVERLQDAIALFHEMVACSQIP 409



 Score = 94.0 bits (232), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 65/212 (30%), Positives = 104/212 (49%), Gaps = 2/212 (0%)

Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLI 402
           A+  F  + RQ     D  TY+T++  L    +      L  +MV     PN+VTY  L+
Sbjct: 360 AMYLFGEMCRQELIP-DTVTYSTLIHGLCHVERLQDAIALFHEMVACSQIPNLVTYRILL 418

Query: 403 HSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLS 462
               +  YL EA+ + K ++    +PD       ID   +AG L+ A D++  + + GL 
Sbjct: 419 DYLCKNRYLAEAMALLKAIEGSNLDPDIQVNNIAIDGMCRAGELEAARDLFSNLSSKGLQ 478

Query: 463 PDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKL 522
           PD +TYS++IN L + G L  A +LF EM   GC  N   YN +     +      A++L
Sbjct: 479 PDVWTYSIMINGLCRRGLLDEASKLFREMDENGCTLNGCIYNTITRGFLRNNETSRAIQL 538

Query: 523 YRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEA 554
            ++M   GF  D  T ++ +++L   G LD++
Sbjct: 539 LQEMVARGFSADASTMTLFVKMLSDDG-LDQS 569



 Score = 90.1 bits (222), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 59/223 (26%), Positives = 101/223 (45%)

Query: 362 TYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQM 421
           +Y T++    + ++      L  +M R    P+ VTY+ LIH       L +A+ +F +M
Sbjct: 343 SYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALFHEM 402

Query: 422 QVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHL 481
                 P+ VTY  L+D   K  +L  AM + K ++ + L PD    ++ I+ + +AG L
Sbjct: 403 VACSQIPNLVTYRILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQVNNIAIDGMCRAGEL 462

Query: 482 QAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIV 541
           +AA  LF  + ++G  P++ TY+IMI    +      A KL+R+M   G   +   Y+ +
Sbjct: 463 EAARDLFSNLSSKGLQPDVWTYSIMINGLCRRGLLDEASKLFREMDENGCTLNGCIYNTI 522

Query: 542 MEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAG 584
                       A  +  EM  + +  D     L V +    G
Sbjct: 523 TRGFLRNNETSRAIQLLQEMVARGFSADASTMTLFVKMLSDDG 565



 Score = 76.6 bits (187), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 76/361 (21%), Positives = 139/361 (38%), Gaps = 48/361 (13%)

Query: 446 LDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNI 505
           +D A+  + +M      P T  ++ ++  + K  H      L  +M + G  PN+ T +I
Sbjct: 42  IDGAISSFNRMLRMQPPPSTVDFNKLLTSIAKMKHHSTLLSLSHQMDSFGIPPNIYTLHI 101

Query: 506 MIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKN 565
           +I           A  +   +   G +PD  T++ ++  +   G + EA  +F +M  + 
Sbjct: 102 LINSFCHLNRVGFAFSVLAKILKLGHQPDTATFTTLIRGIYVEGKIGEALHLFDKMIGEG 161

Query: 566 WVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAY 625
           + PD   YG L++   K GN   A     +M+Q   +PNV   N+++ +  +  Q+++A+
Sbjct: 162 FRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEAF 221

Query: 626 HLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGFCHELMAVSGHPAHMFLLSMPSPGP 685
           +L   M+  G+ P + TY  L+               H L  +                 
Sbjct: 222 NLFSEMVTKGISPDIFTYNSLI---------------HALCNLCEWK------------- 253

Query: 686 DGQNVRDHVGSFLEMMHSEDRESKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDA 745
                  HV + L  M            + VVD L K G   EA  V +   Q+ V P+ 
Sbjct: 254 -------HVATLLNEMVDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGVEPNV 306

Query: 746 VKEKGMSYWLINLHVMSDGTAVIALSRTLAWFRKQMLISGVGPSRID---IVTGWGRRSR 802
           V              + DG  +++           M+  G  P+ I    ++ G+ +  R
Sbjct: 307 VTYTA----------LMDGHCLLSEMDEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQR 356

Query: 803 V 803
           +
Sbjct: 357 I 357



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 40/164 (24%), Positives = 69/164 (42%)

Query: 362 TYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQM 421
           TY  ++  L + R       LL  +      P++   N  I    RA  L  A D+F  +
Sbjct: 413 TYRILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQVNNIAIDGMCRAGELEAARDLFSNL 472

Query: 422 QVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHL 481
              G +PD  TY  +I+   + G LD A  ++++M   G + +   Y+ I     +    
Sbjct: 473 SSKGLQPDVWTYSIMINGLCRRGLLDEASKLFREMDENGCTLNGCIYNTITRGFLRNNET 532

Query: 482 QAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRD 525
             A QL  EMV +G   +  T  + + + +     QS  ++ R+
Sbjct: 533 SRAIQLLQEMVARGFSADASTMTLFVKMLSDDGLDQSLKQILRE 576


>gi|296088470|emb|CBI37461.3| unnamed protein product [Vitis vinifera]
          Length = 822

 Score =  147 bits (370), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 112/428 (26%), Positives = 192/428 (44%), Gaps = 37/428 (8%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           G K D   +++++    R    G   ++  +M+++G  PNVVTY+ LI+   R   + EA
Sbjct: 340 GVKMDVVIFSSIMDAYVRVGDLGKAIEVYTRMLKEGISPNVVTYSILINGLCRNGRVLEA 399

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
             VF Q+   G EP  +TY +LID   K+  L     +Y  M   G  PD    S++IN 
Sbjct: 400 CGVFGQILKQGLEPSVLTYSSLIDGFCKSENLRDGFGLYGIMLRKGHVPDVVVCSMLING 459

Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPD 534
           L + G +  A + F + V +G   N   +N +I    + +  +  LK+Y  M      PD
Sbjct: 460 LSRQGMMDEALRFFFQAVKRGLTLNNYLFNALIDGCFRLKRTRDGLKMYILMGMYKVIPD 519

Query: 535 KVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYE 594
            VTY+++++ L   G LDEA A+F ++ +K + PD  +Y  L+D + K  +     + ++
Sbjct: 520 VVTYTVLVKGLAEQGRLDEALALFFQLLKKGFSPDHIIYCTLIDGFCKKRDPATGLQIFK 579

Query: 595 AMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTY-TLLLSCCTEA 653
            M   G+ P++   N L++ F R G + +   LL+ ++  GL+P + TY T++   C+  
Sbjct: 580 LMQSNGIFPDICIYNVLINMFFREGCVENVLELLREIIKYGLEPDIVTYNTMICGYCSLK 639

Query: 654 RSPYDMGFCHELMAVSGHP--------------------AHMFLLSMPSPGPDGQNVRDH 693
                +     L      P                    A +   SM   GP+  N+  +
Sbjct: 640 IFSKAIKLFEVLKCGRTQPNAITFTILIDAYCKDGRMDDAMLIFSSMLERGPE-PNILTY 698

Query: 694 VGSFLEMMHSEDRESKRGLVD---------------AVVDFLHKSGLKEEAGSVWEVAAQ 738
                    +E+ ES   L +                ++D L K GL EEA   ++ A  
Sbjct: 699 SCLIDGYFKTENTESAFELYEKMLGDRVSPNIVSYSILIDGLCKKGLMEEASLAFQCAIG 758

Query: 739 KNVYPDAV 746
           +++ PD +
Sbjct: 759 RHLLPDVI 766



 Score =  140 bits (353), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 76/255 (29%), Positives = 132/255 (51%)

Query: 393 PNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDM 452
           P+VVTY  L+        L+EAL +F Q+   G  PD + YCTLID   K       + +
Sbjct: 518 PDVVTYTVLVKGLAEQGRLDEALALFFQLLKKGFSPDHIIYCTLIDGFCKKRDPATGLQI 577

Query: 453 YKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAK 512
           +K MQ+ G+ PD   Y+V+IN   + G ++   +L  E++  G  P++VTYN MI     
Sbjct: 578 FKLMQSNGIFPDICIYNVLINMFFREGCVENVLELLREIIKYGLEPDIVTYNTMICGYCS 637

Query: 513 ARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPV 572
            + +  A+KL+  ++    +P+ +T++I+++     G +D+A  +F+ M  +   P+   
Sbjct: 638 LKIFSKAIKLFEVLKCGRTQPNAITFTILIDAYCKDGRMDDAMLIFSSMLERGPEPNILT 697

Query: 573 YGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGML 632
           Y  L+D + K  N   A+E YE ML   + PN+ + + L+    + G + +A    Q  +
Sbjct: 698 YSCLIDGYFKTENTESAFELYEKMLGDRVSPNIVSYSILIDGLCKKGLMEEASLAFQCAI 757

Query: 633 NLGLKPSLQTYTLLL 647
              L P +  Y +L+
Sbjct: 758 GRHLLPDVIAYGILI 772



 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 127/530 (23%), Positives = 216/530 (40%), Gaps = 63/530 (11%)

Query: 333 VLKQLQDH-TVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRD-- 389
           V+ QL+ + T AL FF W     G  H   ++  +  +L R R F    ++ D+MV    
Sbjct: 61  VVFQLRSNPTSALRFFEWAENFLGLCHPVQSFCGIAHVLLRHRMFDPATRVFDRMVGQFG 120

Query: 390 ---------------GCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYC 434
                          G  P+ V Y+ L+H Y R   ++ A+D F  M  +G         
Sbjct: 121 NLEVLGEFHGSFRNYGSNPSTV-YSFLLHCYCRNGMVDRAVDTFAWMSKMGVSISHYAAS 179

Query: 435 TLIDIHAKAGFLDVAMDMYKKMQAA------------------------------GLSPD 464
            ++D+   +  +DV ++ Y++M                                 GL P 
Sbjct: 180 EMLDLLIDSDRIDVILENYEEMCKGLGVYEFVFNSFLKRGEVEKGLNFHRALVERGLVPK 239

Query: 465 TFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYR 524
               + I+  L     +  A   F  MV  G  PNLVT++ +I +  K      A  LY 
Sbjct: 240 IVDCNKILKGLCMGNQIGVASDFFDMMVRSGPSPNLVTFSTLINVYCKELRLDEAFSLYN 299

Query: 525 DMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAG 584
            M   G  PD V YSI++  L   G L+E  ++F+    +    D  ++  ++D + + G
Sbjct: 300 LMIEKGIVPDLVIYSILINGLFRAGKLEEGNSLFSMALARGVKMDVVIFSSIMDAYVRVG 359

Query: 585 NVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYT 644
           ++ KA E Y  ML+ G+ PNV T + L++   R G++ +A  +   +L  GL+PS+ TY+
Sbjct: 360 DLGKAIEVYTRMLKEGISPNVVTYSILINGLCRNGRVLEACGVFGQILKQGLEPSVLTYS 419

Query: 645 LLLSCCTEARSPYDMGFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSE 704
            L+    ++ +  D    + +M   GH   + + SM   G   Q + D    F       
Sbjct: 420 SLIDGFCKSENLRDGFGLYGIMLRKGHVPDVVVCSMLINGLSRQGMMDEALRFFFQAVKR 479

Query: 705 DRESKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAVKEKGMSYWLINLHVMSDG 764
                  L +A++D   +     +   ++ +     V PD V     +Y ++   +   G
Sbjct: 480 GLTLNNYLFNALIDGCFRLKRTRDGLKMYILMGMYKVIPDVV-----TYTVLVKGLAEQG 534

Query: 765 TAVIALSRTLAWFRKQMLISGVGPSRI---DIVTGW-GRRSRVTGTSLVR 810
                L   LA F  Q+L  G  P  I    ++ G+  +R   TG  + +
Sbjct: 535 R----LDEALALFF-QLLKKGFSPDHIIYCTLIDGFCKKRDPATGLQIFK 579



 Score =  129 bits (325), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 75/266 (28%), Positives = 136/266 (51%), Gaps = 3/266 (1%)

Query: 339 DHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTY 398
           D  +AL FF  L++  GF  D   Y T++    + R      ++   M  +G  P++  Y
Sbjct: 537 DEALAL-FFQLLKK--GFSPDHIIYCTLIDGFCKKRDPATGLQIFKLMQSNGIFPDICIY 593

Query: 399 NRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQA 458
           N LI+ + R   +   L++ +++   G EPD VTY T+I  +        A+ +++ ++ 
Sbjct: 594 NVLINMFFREGCVENVLELLREIIKYGLEPDIVTYNTMICGYCSLKIFSKAIKLFEVLKC 653

Query: 459 AGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQS 518
               P+  T++++I+   K G +  A  +F  M+ +G  PN++TY+ +I    K  N +S
Sbjct: 654 GRTQPNAITFTILIDAYCKDGRMDDAMLIFSSMLERGPEPNILTYSCLIDGYFKTENTES 713

Query: 519 ALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVD 578
           A +LY  M      P+ V+YSI+++ L   G ++EA   F     ++ +PD   YG+L+ 
Sbjct: 714 AFELYEKMLGDRVSPNIVSYSILIDGLCKKGLMEEASLAFQCAIGRHLLPDVIAYGILIR 773

Query: 579 LWGKAGNVRKAWEWYEAMLQAGLRPN 604
            + K G + +A   Y+ ML  G+ P+
Sbjct: 774 GYCKVGRLAEAMMLYDHMLVNGIMPD 799



 Score =  129 bits (323), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 88/330 (26%), Positives = 157/330 (47%), Gaps = 4/330 (1%)

Query: 330 ANQVLKQL---QDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQM 386
            N++LK L       VA  FF+ + R +G   +  T++T++ +  +  +      L + M
Sbjct: 243 CNKILKGLCMGNQIGVASDFFDMMVR-SGPSPNLVTFSTLINVYCKELRLDEAFSLYNLM 301

Query: 387 VRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFL 446
           +  G  P++V Y+ LI+   RA  L E   +F      G + D V + +++D + + G L
Sbjct: 302 IEKGIVPDLVIYSILINGLFRAGKLEEGNSLFSMALARGVKMDVVIFSSIMDAYVRVGDL 361

Query: 447 DVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIM 506
             A+++Y +M   G+SP+  TYS++IN L + G +  A  +F +++ QG  P+++TY+ +
Sbjct: 362 GKAIEVYTRMLKEGISPNVVTYSILINGLCRNGRVLEACGVFGQILKQGLEPSVLTYSSL 421

Query: 507 IALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNW 566
           I    K+ N +    LY  M   G  PD V  S+++  L   G +DEA   F +  ++  
Sbjct: 422 IDGFCKSENLRDGFGLYGIMLRKGHVPDVVVCSMLINGLSRQGMMDEALRFFFQAVKRGL 481

Query: 567 VPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYH 626
             +  ++  L+D   +    R   + Y  M    + P+V T   L+      G+L +A  
Sbjct: 482 TLNNYLFNALIDGCFRLKRTRDGLKMYILMGMYKVIPDVVTYTVLVKGLAEQGRLDEALA 541

Query: 627 LLQGMLNLGLKPSLQTYTLLLSCCTEARSP 656
           L   +L  G  P    Y  L+    + R P
Sbjct: 542 LFFQLLKKGFSPDHIIYCTLIDGFCKKRDP 571



 Score = 97.1 bits (240), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 61/235 (25%), Positives = 117/235 (49%), Gaps = 5/235 (2%)

Query: 338 QDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVT 397
           +D    L  F  ++    F  D   Y  ++ +  R      + +LL ++++ G +P++VT
Sbjct: 569 RDPATGLQIFKLMQSNGIFP-DICIYNVLINMFFREGCVENVLELLREIIKYGLEPDIVT 627

Query: 398 YNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQ 457
           YN +I  Y      ++A+ +F+ ++    +P+ +T+  LID + K G +D AM ++  M 
Sbjct: 628 YNTMICGYCSLKIFSKAIKLFEVLKCGRTQPNAITFTILIDAYCKDGRMDDAMLIFSSML 687

Query: 458 AAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQ 517
             G  P+  TYS +I+   K  + ++A +L+ +M+     PN+V+Y+I+I    K    +
Sbjct: 688 ERGPEPNILTYSCLIDGYFKTENTESAFELYEKMLGDRVSPNIVSYSILIDGLCKKGLME 747

Query: 518 SALKLYRDMQNAGFEPDKVTYSIVMEVLGHC--GYLDEAEAVFAEMRRKNWVPDE 570
            A   ++        PD + Y I++   G+C  G L EA  ++  M     +PD+
Sbjct: 748 EASLAFQCAIGRHLLPDVIAYGILIR--GYCKVGRLAEAMMLYDHMLVNGIMPDD 800



 Score = 90.1 bits (222), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 54/184 (29%), Positives = 93/184 (50%)

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
           + G + D  TY TM+      + F    KL + +     QPN +T+  LI +Y +   ++
Sbjct: 618 KYGLEPDIVTYNTMICGYCSLKIFSKAIKLFEVLKCGRTQPNAITFTILIDAYCKDGRMD 677

Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
           +A+ +F  M   G EP+ +TY  LID + K    + A ++Y+KM    +SP+  +YS++I
Sbjct: 678 DAMLIFSSMLERGPEPNILTYSCLIDGYFKTENTESAFELYEKMLGDRVSPNIVSYSILI 737

Query: 473 NCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFE 532
           + L K G ++ A   F   + +  +P+++ Y I+I    K      A+ LY  M   G  
Sbjct: 738 DGLCKKGLMEEASLAFQCAIGRHLLPDVIAYGILIRGYCKVGRLAEAMMLYDHMLVNGIM 797

Query: 533 PDKV 536
           PD +
Sbjct: 798 PDDL 801


>gi|116309903|emb|CAH66938.1| OSIGBa0116M22.5 [Oryza sativa Indica Group]
          Length = 568

 Score =  147 bits (370), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 92/311 (29%), Positives = 149/311 (47%), Gaps = 4/311 (1%)

Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLL--DQMVRDGCQPNVVTYNR 400
           A+  F+ +  +   K +   Y  ++G  G   Q      LL  D+MV  G    V TYN 
Sbjct: 240 AVKVFDEMLTKGEVKPEAVMYNALIG--GYCDQGKLDTALLYRDRMVERGVAMTVATYNL 297

Query: 401 LIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAG 460
           L+H+        EA ++ ++M   G   D  TY  LI+ H K G +  A+++++ M   G
Sbjct: 298 LVHALFMDGRGTEAYELVEEMGGKGLALDVFTYNILINGHCKEGNVKKALEIFENMSRRG 357

Query: 461 LSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSAL 520
           +     TY+ +I  L K G +Q   +LF E V +G  P+LV YN +I   + + N   A 
Sbjct: 358 VRATVVTYTSLIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAF 417

Query: 521 KLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLW 580
           ++  +M+     PD VTY+ +M  L   G +DEA  +  EM ++   PD   Y  L+  +
Sbjct: 418 EIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTKRGIQPDLVTYNTLISGY 477

Query: 581 GKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSL 640
              G+V+ A      M+  G  P + T N+L+    + GQ  DA ++++ M+  G+ P  
Sbjct: 478 SMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDD 537

Query: 641 QTYTLLLSCCT 651
            TY  L+   T
Sbjct: 538 STYISLIEGLT 548



 Score =  135 bits (341), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 84/289 (29%), Positives = 147/289 (50%), Gaps = 2/289 (0%)

Query: 362 TYTTMV-GILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQ 420
           TY T++ G   R R   A++ + +   R G  PN  TY  +I  + +   ++EA+ VF +
Sbjct: 187 TYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDE 246

Query: 421 MQVVG-CEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAG 479
           M   G  +P+ V Y  LI  +   G LD A+    +M   G++    TY+++++ L   G
Sbjct: 247 MLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDG 306

Query: 480 HLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYS 539
               A++L  EM  +G   ++ TYNI+I    K  N + AL+++ +M   G     VTY+
Sbjct: 307 RGTEAYELVEEMGGKGLALDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYT 366

Query: 540 IVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQA 599
            ++  L   G + E + +F E  R+   PD  +Y  L++    +GN+ +A+E    M + 
Sbjct: 367 SLIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKK 426

Query: 600 GLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
            + P+  T N+L+     +G++ +A  L+  M   G++P L TY  L+S
Sbjct: 427 RIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTKRGIQPDLVTYNTLIS 475



 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 87/306 (28%), Positives = 146/306 (47%), Gaps = 1/306 (0%)

Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDG-CQPNVVTYNRL 401
           AL     +R + G   +++TY T++    +  +     K+ D+M+  G  +P  V YN L
Sbjct: 204 ALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNAL 263

Query: 402 IHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGL 461
           I  Y     L+ AL    +M   G      TY  L+      G    A ++ ++M   GL
Sbjct: 264 IGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGL 323

Query: 462 SPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALK 521
           + D FTY+++IN   K G+++ A ++F  M  +G    +VTY  +I   +K    Q   K
Sbjct: 324 ALDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTSLIYALSKKGQVQETDK 383

Query: 522 LYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWG 581
           L+ +    G  PD V Y+ ++      G +D A  +  EM +K   PD+  Y  L+    
Sbjct: 384 LFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLC 443

Query: 582 KAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQ 641
             G V +A +  + M + G++P++ T N+L+S +   G + DA  +   M+N G  P+L 
Sbjct: 444 LLGRVDEARKLIDEMTKRGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLL 503

Query: 642 TYTLLL 647
           TY  L+
Sbjct: 504 TYNALI 509



 Score =  109 bits (273), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 69/233 (29%), Positives = 119/233 (51%), Gaps = 4/233 (1%)

Query: 316 EALGNTNYSMDAYQANQVLK-QLQDHTV--ALGFFNWLRRQAGFKHDEHTYTTMVGILGR 372
           E +G    ++D +  N ++    ++  V  AL  F  + R+ G +    TYT+++  L +
Sbjct: 316 EEMGGKGLALDVFTYNILINGHCKEGNVKKALEIFENMSRR-GVRATVVTYTSLIYALSK 374

Query: 373 ARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVT 432
             Q    +KL D+ VR G +P++V YN LI+S+  +  ++ A ++  +M+     PD VT
Sbjct: 375 KGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVT 434

Query: 433 YCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMV 492
           Y TL+      G +D A  +  +M   G+ PD  TY+ +I+     G ++ A ++  EM+
Sbjct: 435 YNTLMRGLCLLGRVDEARKLIDEMTKRGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMM 494

Query: 493 NQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVL 545
           N+G  P L+TYN +I    K      A  + ++M   G  PD  TY  ++E L
Sbjct: 495 NKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEGL 547



 Score = 84.3 bits (207), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 83/306 (27%), Positives = 132/306 (43%), Gaps = 57/306 (18%)

Query: 465 TFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYR 524
           T T+++++  L  AG    A +L  +M      PN VTYN +IA        Q+AL + R
Sbjct: 154 TTTFNIMLRHLCSAGKPARALELLRQMPR----PNAVTYNTVIAGFCSRGRVQAALDIMR 209

Query: 525 DM-QNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWV-PDEPVYGLLVDLWGK 582
           +M +  G  P++ TY  V+      G +DEA  VF EM  K  V P+  +Y  L+  +  
Sbjct: 210 EMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCD 269

Query: 583 AGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQT 642
            G +  A  + + M++ G+   V T N L+ A    G+ ++AY L++ M   GL   + T
Sbjct: 270 QGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLALDVFT 329

Query: 643 YTLLLSCCTEARSPYDMGFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMH 702
           Y +L++           G C E                        NV+  +  F  M  
Sbjct: 330 YNILIN-----------GHCKE-----------------------GNVKKALEIFENM-- 353

Query: 703 SEDRESKRGLVDAVVDF------LHKSGLKEEAGSVWEVAAQKNVYPDAVKEKGMSYWLI 756
                S+RG+   VV +      L K G  +E   +++ A ++ + PD V    +   LI
Sbjct: 354 -----SRRGVRATVVTYTSLIYALSKKGQVQETDKLFDEAVRRGIRPDLV----LYNALI 404

Query: 757 NLHVMS 762
           N H  S
Sbjct: 405 NSHSTS 410


>gi|449530367|ref|XP_004172167.1| PREDICTED: pentatricopeptide repeat-containing protein At5g04810,
           chloroplastic-like, partial [Cucumis sativus]
          Length = 564

 Score =  147 bits (370), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 84/319 (26%), Positives = 163/319 (51%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
             AG KH+  TY+ ++    + + +     + + +++DG +P+VV YN +I ++     +
Sbjct: 115 EHAGIKHNMKTYSMLINGFLKLKDWANAFAIFEDLIKDGIKPDVVLYNNIITAFCGMGKM 174

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
           + A+   K+MQ    +P   T+  +I   A+ G +  A+D++  M+ +G  P   TY+ +
Sbjct: 175 DRAVCTVKEMQKQRHKPTTRTFMPIIHGFARKGEMKKALDVFDMMRMSGCIPTVHTYNAL 234

Query: 472 INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF 531
           I  L +   ++ A Q+  EM   G  PN  TY  ++   A   +   A   +  +++ G 
Sbjct: 235 ILGLVEKRKMEKAEQILDEMTLAGVSPNEHTYTTIMHGYASLGDTGKAFAYFTKLRDEGL 294

Query: 532 EPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWE 591
           + D  TY  +++     G +  A AV  EM  +N   +  +Y +L+D W + G+V +A +
Sbjct: 295 QLDVYTYEALLKACCKSGRMQSALAVTKEMSAQNIPRNTFIYNILIDGWARRGDVWEAAD 354

Query: 592 WYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCT 651
             + M + G++P++ T  S ++A  + G +  A   ++ M ++G+KP+++TYT L++   
Sbjct: 355 LMQQMKREGVQPDIHTYTSFINACSKAGDMQRATKTIEEMKSVGVKPNVKTYTTLINGWA 414

Query: 652 EARSPYDMGFCHELMAVSG 670
            A  P     C E M +SG
Sbjct: 415 RASLPEKALSCFEEMKLSG 433



 Score =  113 bits (283), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 77/263 (29%), Positives = 121/263 (46%), Gaps = 4/263 (1%)

Query: 357 KHDEHTYTTMVGILGRARQFGAINKLLD---QMVRDGCQPNVVTYNRLIHSYGRANYLNE 413
           +H   T T M  I G AR+ G + K LD    M   GC P V TYN LI        + +
Sbjct: 188 RHKPTTRTFMPIIHGFARK-GEMKKALDVFDMMRMSGCIPTVHTYNALILGLVEKRKMEK 246

Query: 414 ALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIIN 473
           A  +  +M + G  P+  TY T++  +A  G    A   + K++  GL  D +TY  ++ 
Sbjct: 247 AEQILDEMTLAGVSPNEHTYTTIMHGYASLGDTGKAFAYFTKLRDEGLQLDVYTYEALLK 306

Query: 474 CLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEP 533
              K+G +Q+A  +  EM  Q    N   YNI+I   A+  +   A  L + M+  G +P
Sbjct: 307 ACCKSGRMQSALAVTKEMSAQNIPRNTFIYNILIDGWARRGDVWEAADLMQQMKREGVQP 366

Query: 534 DKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWY 593
           D  TY+  +      G +  A     EM+     P+   Y  L++ W +A    KA   +
Sbjct: 367 DIHTYTSFINACSKAGDMQRATKTIEEMKSVGVKPNVKTYTTLINGWARASLPEKALSCF 426

Query: 594 EAMLQAGLRPNVPTCNSLLSAFL 616
           E M  +GL+P+    + L+++ L
Sbjct: 427 EEMKLSGLKPDRAVYHCLMTSLL 449



 Score =  111 bits (278), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 61/254 (24%), Positives = 129/254 (50%)

Query: 394 NVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMY 453
           N + Y  +I++Y +   +++A  + ++M+  G +     Y T++D +   G  D  + ++
Sbjct: 17  NAIIYGNIIYAYCQRCNMDKAEALVREMEEEGIDAPIDIYHTMMDGYTMVGDEDKCLLVF 76

Query: 454 KKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKA 513
           ++ +  GL+P   TY  +IN   K G +  A ++  EM + G   N+ TY+++I    K 
Sbjct: 77  ERFKECGLNPSVITYGCLINLYAKLGKVSKALEVSKEMEHAGIKHNMKTYSMLINGFLKL 136

Query: 514 RNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVY 573
           +++ +A  ++ D+   G +PD V Y+ ++      G +D A     EM+++   P    +
Sbjct: 137 KDWANAFAIFEDLIKDGIKPDVVLYNNIITAFCGMGKMDRAVCTVKEMQKQRHKPTTRTF 196

Query: 574 GLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLN 633
             ++  + + G ++KA + ++ M  +G  P V T N+L+   +   ++  A  +L  M  
Sbjct: 197 MPIIHGFARKGEMKKALDVFDMMRMSGCIPTVHTYNALILGLVEKRKMEKAEQILDEMTL 256

Query: 634 LGLKPSLQTYTLLL 647
            G+ P+  TYT ++
Sbjct: 257 AGVSPNEHTYTTIM 270



 Score =  111 bits (277), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 97/414 (23%), Positives = 182/414 (43%), Gaps = 20/414 (4%)

Query: 382 LLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHA 441
           L+ +M  +G    +  Y+ ++  Y      ++ L VF++ +  G  P  +TY  LI+++A
Sbjct: 40  LVREMEEEGIDAPIDIYHTMMDGYTMVGDEDKCLLVFERFKECGLNPSVITYGCLINLYA 99

Query: 442 KAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLV 501
           K G +  A+++ K+M+ AG+  +  TYS++IN   K      A  +F +++  G  P++V
Sbjct: 100 KLGKVSKALEVSKEMEHAGIKHNMKTYSMLINGFLKLKDWANAFAIFEDLIKDGIKPDVV 159

Query: 502 TYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEM 561
            YN +I           A+   ++MQ    +P   T+  ++      G + +A  VF  M
Sbjct: 160 LYNNIITAFCGMGKMDRAVCTVKEMQKQRHKPTTRTFMPIIHGFARKGEMKKALDVFDMM 219

Query: 562 RRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQL 621
           R    +P    Y  L+    +   + KA +  + M  AG+ PN  T  +++  +  +G  
Sbjct: 220 RMSGCIPTVHTYNALILGLVEKRKMEKAEQILDEMTLAGVSPNEHTYTTIMHGYASLGDT 279

Query: 622 SDAYHLLQGMLNLGLKPSLQTYTLLL-SCCTEARSPYDMGFCHELMAVSGHPAHMFLLSM 680
             A+     + + GL+  + TY  LL +CC   R    +    E M+    P + F+ ++
Sbjct: 280 GKAFAYFTKLRDEGLQLDVYTYEALLKACCKSGRMQSALAVTKE-MSAQNIPRNTFIYNI 338

Query: 681 PSPGPDGQNVRDHVGSFLEMMHSEDRESKRGLVDAVVDFLH---KSGLKEEAGSVWEVAA 737
                DG   R  V    ++M    RE  +  +     F++   K+G  + A    E   
Sbjct: 339 L---IDGWARRGDVWEAADLMQQMKREGVQPDIHTYTSFINACSKAGDMQRATKTIEEMK 395

Query: 738 QKNVYPDAVKEKGMSYWLINLHVMSDGTAVIAL-SRTLAWFRKQMLISGVGPSR 790
              V P+          +     + +G A  +L  + L+ F ++M +SG+ P R
Sbjct: 396 SVGVKPN----------VKTYTTLINGWARASLPEKALSCF-EEMKLSGLKPDR 438



 Score =  103 bits (258), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 65/235 (27%), Positives = 114/235 (48%), Gaps = 1/235 (0%)

Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLI 402
           AL  F+ + R +G     HTY  ++  L   R+     ++LD+M   G  PN  TY  ++
Sbjct: 212 ALDVFD-MMRMSGCIPTVHTYNALILGLVEKRKMEKAEQILDEMTLAGVSPNEHTYTTIM 270

Query: 403 HSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLS 462
           H Y       +A   F +++  G + D  TY  L+    K+G +  A+ + K+M A  + 
Sbjct: 271 HGYASLGDTGKAFAYFTKLRDEGLQLDVYTYEALLKACCKSGRMQSALAVTKEMSAQNIP 330

Query: 463 PDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKL 522
            +TF Y+++I+   + G +  A  L  +M  +G  P++ TY   I   +KA + Q A K 
Sbjct: 331 RNTFIYNILIDGWARRGDVWEAADLMQQMKREGVQPDIHTYTSFINACSKAGDMQRATKT 390

Query: 523 YRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLV 577
             +M++ G +P+  TY+ ++         ++A + F EM+     PD  VY  L+
Sbjct: 391 IEEMKSVGVKPNVKTYTTLINGWARASLPEKALSCFEEMKLSGLKPDRAVYHCLM 445



 Score = 68.9 bits (167), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 39/150 (26%), Positives = 73/150 (48%)

Query: 499 NLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVF 558
           N + Y  +I    +  N   A  L R+M+  G +     Y  +M+     G  D+   VF
Sbjct: 17  NAIIYGNIIYAYCQRCNMDKAEALVREMEEEGIDAPIDIYHTMMDGYTMVGDEDKCLLVF 76

Query: 559 AEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRV 618
              +     P    YG L++L+ K G V KA E  + M  AG++ N+ T + L++ FL++
Sbjct: 77  ERFKECGLNPSVITYGCLINLYAKLGKVSKALEVSKEMEHAGIKHNMKTYSMLINGFLKL 136

Query: 619 GQLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
              ++A+ + + ++  G+KP +  Y  +++
Sbjct: 137 KDWANAFAIFEDLIKDGIKPDVVLYNNIIT 166



 Score = 57.8 bits (138), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 38/182 (20%), Positives = 82/182 (45%)

Query: 462 SPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALK 521
           S +   Y  II    +  ++  A  L  EM  +G    +  Y+ M+       +    L 
Sbjct: 15  SLNAIIYGNIIYAYCQRCNMDKAEALVREMEEEGIDAPIDIYHTMMDGYTMVGDEDKCLL 74

Query: 522 LYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWG 581
           ++   +  G  P  +TY  ++ +    G + +A  V  EM       +   Y +L++ + 
Sbjct: 75  VFERFKECGLNPSVITYGCLINLYAKLGKVSKALEVSKEMEHAGIKHNMKTYSMLINGFL 134

Query: 582 KAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQ 641
           K  +   A+  +E +++ G++P+V   N++++AF  +G++  A   ++ M     KP+ +
Sbjct: 135 KLKDWANAFAIFEDLIKDGIKPDVVLYNNIITAFCGMGKMDRAVCTVKEMQKQRHKPTTR 194

Query: 642 TY 643
           T+
Sbjct: 195 TF 196


>gi|168036199|ref|XP_001770595.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162678116|gb|EDQ64578.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 743

 Score =  147 bits (370), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 85/280 (30%), Positives = 140/280 (50%)

Query: 363 YTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQ 422
           Y+ M+ I  R   F    K+++ M      P+   + + +++YG+   + EA  +   M+
Sbjct: 118 YSAMIAIYTRCGFFEKAEKIMEDMWNHKIAPDRDNWLKQMNTYGQQGKIEEAEHIMDTME 177

Query: 423 VVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQ 482
            +G     V Y ++I  + KAG  + A+ +++KM+ AGL PD  TYS +I   G+AG L+
Sbjct: 178 RLGMHLGVVGYNSMITAYGKAGLYEKALRLFEKMKEAGLEPDEVTYSCMIGACGRAGKLR 237

Query: 483 AAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVM 542
            A   F  M   G +P    +N +I+L  KARN    +++  DM+N G  PD  T   V+
Sbjct: 238 DALDYFQAMKRLGIMPASSNFNTLISLYGKARNVVGIVRVLADMKNFGCTPDSQTLDAVV 297

Query: 543 EVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLR 602
                 G   +   V + +R   WV D   YG L+ ++ K    ++A   + AM +AG+ 
Sbjct: 298 RAYERAGQTKKVVQVLSLLREAGWVEDTESYGTLLHVYLKCNLQKEALSVFSAMRKAGMA 357

Query: 603 PNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQT 642
           P    C SL+ A    G   DA ++ + M + G+ PSL+T
Sbjct: 358 PKEYMCRSLICACKDAGMFEDATNVFRDMQSAGVVPSLET 397



 Score =  140 bits (352), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 93/321 (28%), Positives = 146/321 (45%), Gaps = 34/321 (10%)

Query: 361 HTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQ 420
           ++Y  M  ILG  +Q+  I++LL QM+ DGC P+  T+N LI S  +A+Y + A   F+ 
Sbjct: 12  YSYNIMFKILGSRQQWPIIDELLGQMLGDGCVPDDYTFNTLIMSASKADYADYATRAFQM 71

Query: 421 MQVVGCEPDRVT----------------------------------YCTLIDIHAKAGFL 446
           M   G +P R+T                                  Y  +I I+ + GF 
Sbjct: 72  MLEKGVQPTRLTYSMMMLLYQKNGKVEDAEVAFSHMLQSGIQVVAAYSAMIAIYTRCGFF 131

Query: 447 DVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIM 506
           + A  + + M    ++PD   +   +N  G+ G ++ A  +   M   G    +V YN M
Sbjct: 132 EKAEKIMEDMWNHKIAPDRDNWLKQMNTYGQQGKIEEAEHIMDTMERLGMHLGVVGYNSM 191

Query: 507 IALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNW 566
           I    KA  Y+ AL+L+  M+ AG EPD+VTYS ++   G  G L +A   F  M+R   
Sbjct: 192 ITAYGKAGLYEKALRLFEKMKEAGLEPDEVTYSCMIGACGRAGKLRDALDYFQAMKRLGI 251

Query: 567 VPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYH 626
           +P    +  L+ L+GKA NV         M   G  P+  T ++++ A+ R GQ      
Sbjct: 252 MPASSNFNTLISLYGKARNVVGIVRVLADMKNFGCTPDSQTLDAVVRAYERAGQTKKVVQ 311

Query: 627 LLQGMLNLGLKPSLQTYTLLL 647
           +L  +   G     ++Y  LL
Sbjct: 312 VLSLLREAGWVEDTESYGTLL 332



 Score =  128 bits (322), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 83/279 (29%), Positives = 137/279 (49%), Gaps = 7/279 (2%)

Query: 326 DAYQANQVLKQLQD---HTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKL 382
           D+Y  + +L+  Q     T A   + W  R +  + DE     ++    R      ++K+
Sbjct: 465 DSYTYHSMLRMCQKCNLQTQAEEIY-WRLRNSDVELDEVMCNCVLNTCARFLPLEEVHKI 523

Query: 383 LDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAK 442
             +M+  GC PN +T+N +I  YG++  L+ A D  K  Q +G   D++T+ TLI+ + K
Sbjct: 524 FQEMIDVGCIPNTITFNVMIDLYGKSGMLDRARDASKLAQQLGV-ADKITFSTLINSYGK 582

Query: 443 A-GFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLV 501
              F ++   +++ MQ AG       Y+ +++  GKAGHL     +   M   G   +L 
Sbjct: 583 KQDFRNMEATLWE-MQNAGHGGSLEAYNCVLDAYGKAGHLDKLEDVIARMEKSGLQMDLA 641

Query: 502 TYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEM 561
           +YNI+I +  +         L+  MQ  GF PD+ TY+ ++   G+  Y D+A   F  M
Sbjct: 642 SYNILINIYGRHTKIAEMEALFHKMQEEGFIPDRWTYNTMIRTYGYADYPDKAVDTFKMM 701

Query: 562 RRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAG 600
           +    +PD   Y +LV  + KAGN+ +A  W   M QAG
Sbjct: 702 QDSGIMPDRVTYVMLVAAFEKAGNLLEAARWSLWMTQAG 740



 Score =  122 bits (305), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 80/320 (25%), Positives = 157/320 (49%), Gaps = 14/320 (4%)

Query: 329 QANQVLKQLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVR 388
           +A ++++ + +H +A    NWL++        +TY       G+  +      ++D M R
Sbjct: 133 KAEKIMEDMWNHKIAPDRDNWLKQM-------NTY-------GQQGKIEEAEHIMDTMER 178

Query: 389 DGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDV 448
            G    VV YN +I +YG+A    +AL +F++M+  G EPD VTY  +I    +AG L  
Sbjct: 179 LGMHLGVVGYNSMITAYGKAGLYEKALRLFEKMKEAGLEPDEVTYSCMIGACGRAGKLRD 238

Query: 449 AMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIA 508
           A+D ++ M+  G+ P +  ++ +I+  GKA ++    ++  +M N GC P+  T + ++ 
Sbjct: 239 ALDYFQAMKRLGIMPASSNFNTLISLYGKARNVVGIVRVLADMKNFGCTPDSQTLDAVVR 298

Query: 509 LQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVP 568
              +A   +  +++   ++ AG+  D  +Y  ++ V   C    EA +VF+ MR+    P
Sbjct: 299 AYERAGQTKKVVQVLSLLREAGWVEDTESYGTLLHVYLKCNLQKEALSVFSAMRKAGMAP 358

Query: 569 DEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLL 628
            E +   L+     AG    A   +  M  AG+ P++ T  ++++     G +  A  L 
Sbjct: 359 KEYMCRSLICACKDAGMFEDATNVFRDMQSAGVVPSLETSCTMINVHGLKGDVKQAEELF 418

Query: 629 QGMLNLGLKPSLQTYTLLLS 648
           + + +   K  +  Y ++++
Sbjct: 419 RSLRSSVSKLDIIAYNVIIN 438



 Score =  115 bits (289), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 74/285 (25%), Positives = 140/285 (49%), Gaps = 1/285 (0%)

Query: 340 HTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYN 399
           H  A   +  +  + G   D +TY +M+ +  +        ++  ++     + + V  N
Sbjct: 446 HEEAFRIYKLMEEEDGLLPDSYTYHSMLRMCQKCNLQTQAEEIYWRLRNSDVELDEVMCN 505

Query: 400 RLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAA 459
            ++++  R   L E   +F++M  VGC P+ +T+  +ID++ K+G LD A D  K  Q  
Sbjct: 506 CVLNTCARFLPLEEVHKIFQEMIDVGCIPNTITFNVMIDLYGKSGMLDRARDASKLAQQL 565

Query: 460 GLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSA 519
           G++ D  T+S +IN  GK    +       EM N G   +L  YN ++    KA +    
Sbjct: 566 GVA-DKITFSTLINSYGKKQDFRNMEATLWEMQNAGHGGSLEAYNCVLDAYGKAGHLDKL 624

Query: 520 LKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDL 579
             +   M+ +G + D  +Y+I++ + G    + E EA+F +M+ + ++PD   Y  ++  
Sbjct: 625 EDVIARMEKSGLQMDLASYNILINIYGRHTKIAEMEALFHKMQEEGFIPDRWTYNTMIRT 684

Query: 580 WGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDA 624
           +G A    KA + ++ M  +G+ P+  T   L++AF + G L +A
Sbjct: 685 YGYADYPDKAVDTFKMMQDSGIMPDRVTYVMLVAAFEKAGNLLEA 729



 Score =  105 bits (261), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 77/340 (22%), Positives = 146/340 (42%), Gaps = 41/340 (12%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           + AG      T  TM+ + G         +L   +     + +++ YN +I+ Y R    
Sbjct: 387 QSAGVVPSLETSCTMINVHGLKGDVKQAEELFRSLRSSVSKLDIIAYNVIINVYMRYGMH 446

Query: 412 NEALDVFKQMQVV-GCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSV 470
            EA  ++K M+   G  PD  TY +++ +  K      A ++Y +++ + +  D    + 
Sbjct: 447 EEAFRIYKLMEEEDGLLPDSYTYHSMLRMCQKCNLQTQAEEIYWRLRNSDVELDEVMCNC 506

Query: 471 IINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKA----------------- 513
           ++N   +   L+  H++F EM++ GCIPN +T+N+MI L  K+                 
Sbjct: 507 VLNTCARFLPLEEVHKIFQEMIDVGCIPNTITFNVMIDLYGKSGMLDRARDASKLAQQLG 566

Query: 514 --------------------RNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDE 553
                               RN ++ L    +MQNAG       Y+ V++  G  G+LD+
Sbjct: 567 VADKITFSTLINSYGKKQDFRNMEATL---WEMQNAGHGGSLEAYNCVLDAYGKAGHLDK 623

Query: 554 AEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLS 613
            E V A M +     D   Y +L++++G+   + +    +  M + G  P+  T N+++ 
Sbjct: 624 LEDVIARMEKSGLQMDLASYNILINIYGRHTKIAEMEALFHKMQEEGFIPDRWTYNTMIR 683

Query: 614 AFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEA 653
            +        A    + M + G+ P   TY +L++   +A
Sbjct: 684 TYGYADYPDKAVDTFKMMQDSGIMPDRVTYVMLVAAFEKA 723



 Score = 83.2 bits (204), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 59/261 (22%), Positives = 104/261 (39%), Gaps = 69/261 (26%)

Query: 464 DTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLY 523
           + ++Y+++   LG         +L  +M+  GC+P+  T+N +I   +KA     A + +
Sbjct: 10  NVYSYNIMFKILGSRQQWPIIDELLGQMLGDGCVPDDYTFNTLIMSASKADYADYATRAF 69

Query: 524 RDMQNAGFEPDKVTYSIVM----------------------------------EVLGHCG 549
           + M   G +P ++TYS++M                                   +   CG
Sbjct: 70  QMMLEKGVQPTRLTYSMMMLLYQKNGKVEDAEVAFSHMLQSGIQVVAAYSAMIAIYTRCG 129

Query: 550 YLDEAEAVFAEM-------RRKNWVPDEPVYGL--------------------------- 575
           + ++AE +  +M        R NW+     YG                            
Sbjct: 130 FFEKAEKIMEDMWNHKIAPDRDNWLKQMNTYGQQGKIEEAEHIMDTMERLGMHLGVVGYN 189

Query: 576 -LVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNL 634
            ++  +GKAG   KA   +E M +AGL P+  T + ++ A  R G+L DA    Q M  L
Sbjct: 190 SMITAYGKAGLYEKALRLFEKMKEAGLEPDEVTYSCMIGACGRAGKLRDALDYFQAMKRL 249

Query: 635 GLKPSLQTYTLLLSCCTEARS 655
           G+ P+   +  L+S   +AR+
Sbjct: 250 GIMPASSNFNTLISLYGKARN 270



 Score = 82.8 bits (203), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 50/173 (28%), Positives = 90/173 (52%)

Query: 359 DEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVF 418
           D+ T++T++   G+ + F  +   L +M   G   ++  YN ++ +YG+A +L++  DV 
Sbjct: 569 DKITFSTLINSYGKKQDFRNMEATLWEMQNAGHGGSLEAYNCVLDAYGKAGHLDKLEDVI 628

Query: 419 KQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKA 478
            +M+  G + D  +Y  LI+I+ +   +     ++ KMQ  G  PD +TY+ +I   G A
Sbjct: 629 ARMEKSGLQMDLASYNILINIYGRHTKIAEMEALFHKMQEEGFIPDRWTYNTMIRTYGYA 688

Query: 479 GHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF 531
            +   A   F  M + G +P+ VTY +++A   KA N   A +    M  AG+
Sbjct: 689 DYPDKAVDTFKMMQDSGIMPDRVTYVMLVAAFEKAGNLLEAARWSLWMTQAGY 741


>gi|222422989|dbj|BAH19478.1| AT2G06000 [Arabidopsis thaliana]
          Length = 536

 Score =  147 bits (370), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 105/405 (25%), Positives = 196/405 (48%), Gaps = 23/405 (5%)

Query: 253 KSNLQPSDAKVVECVSERFSKPSREMKIPAGLAPFSRHFASTGNVVESVSRILRQWK--W 310
           K+ L     ++ EC+      P+  +     L      FA  G +  + + +L+ ++   
Sbjct: 115 KAGLHDLAGQMFECMKSDGVSPNNRL-----LGFLVSSFAEKGKLHFATALLLQSFEVEG 169

Query: 311 GPLAEEALGNTNYSMDAYQANQVLKQLQDHTVALGFFNWLRRQAGFKHDEHTYTTMV-GI 369
             +   +L NT   +D  +    +K   +H         LR Q+   +D  T+  ++ G+
Sbjct: 170 CCMVVNSLLNTLVKLD--RVEDAMKLFDEH---------LRFQSC--NDTKTFNILIRGL 216

Query: 370 LGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVG-CEP 428
            G  +   A+ +LL  M   GC+P++VTYN LI  + ++N LN+A ++FK ++    C P
Sbjct: 217 CGVGKAEKAL-ELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSP 275

Query: 429 DRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLF 488
           D VTY ++I  + KAG +  A  +   M   G+ P   T++V+++   KAG +  A ++ 
Sbjct: 276 DVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIR 335

Query: 489 CEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHC 548
            +M++ GC P++VT+  +I    +        +L+ +M   G  P+  TYSI++  L + 
Sbjct: 336 GKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNE 395

Query: 549 GYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTC 608
             L +A  +  ++  K+ +P   +Y  ++D + KAG V +A    E M +   +P+  T 
Sbjct: 396 NRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITF 455

Query: 609 NSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEA 653
             L+      G++ +A  +   M+ +G  P   T + LLSC  +A
Sbjct: 456 TILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLSCLLKA 500



 Score =  128 bits (322), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 85/302 (28%), Positives = 144/302 (47%), Gaps = 7/302 (2%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDG--CQPNVVTYNRLIHSYGRANYLN 412
           G + D  TY T++    ++ +    +++    V+ G  C P+VVTY  +I  Y +A  + 
Sbjct: 236 GCEPDIVTYNTLIQGFCKSNELNKASEMFKD-VKSGSVCSPDVVTYTSMISGYCKAGKMR 294

Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
           EA  +   M  +G  P  VT+  L+D +AKAG +  A ++  KM + G  PD  T++ +I
Sbjct: 295 EASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLI 354

Query: 473 NCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFE 532
           +   + G +    +L+ EM  +G  PN  TY+I+I           A +L   + +    
Sbjct: 355 DGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDII 414

Query: 533 PDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEW 592
           P    Y+ V++     G ++EA  +  EM +K   PD+  + +L+      G + +A   
Sbjct: 415 PQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSI 474

Query: 593 YEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQ----GMLNLGLKPSLQTYTLLLS 648
           +  M+  G  P+  T +SLLS  L+ G   +AYHL Q    G  N  + P  +T    L+
Sbjct: 475 FHKMVAIGCSPDKITVSSLLSCLLKAGMAKEAYHLNQIARKGQSNNVVPPETKTANATLA 534

Query: 649 CC 650
            C
Sbjct: 535 AC 536



 Score =  121 bits (303), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 90/337 (26%), Positives = 166/337 (49%), Gaps = 11/337 (3%)

Query: 324 SMDAYQANQVLKQLQDHT-VALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKL 382
           +++ + + +V+K+L ++  +   F+ + R +   +H   TY  +   L +A       ++
Sbjct: 66  NLNPFISFEVVKKLDNNPHIGFRFWEFSRFKLNIRHSFWTYNLLTRSLCKAGLHDLAGQM 125

Query: 383 LDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQ-MQVVGCEPDRVTYCTLIDIHA 441
            + M  DG  PN      L+ S+     L+ A  +  Q  +V GC    +   +L++   
Sbjct: 126 FECMKSDGVSPNNRLLGFLVSSFAEKGKLHFATALLLQSFEVEGC---CMVVNSLLNTLV 182

Query: 442 KAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLV 501
           K   ++ AM ++ +        DT T++++I  L   G  + A +L   M   GC P++V
Sbjct: 183 KLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKAEKALELLGVMSGFGCEPDIV 242

Query: 502 TYNIMIALQAKARNYQSALKLYRDMQNAGF-EPDKVTYSIVMEVLGHC--GYLDEAEAVF 558
           TYN +I    K+     A ++++D+++     PD VTY+ ++   G+C  G + EA ++ 
Sbjct: 243 TYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMIS--GYCKAGKMREASSLL 300

Query: 559 AEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRV 618
            +M R    P    + +LVD + KAG +  A E    M+  G  P+V T  SL+  + RV
Sbjct: 301 DDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRV 360

Query: 619 GQLSDAYHLLQGMLNLGLKPSLQTYTLLL-SCCTEAR 654
           GQ+S  + L + M   G+ P+  TY++L+ + C E R
Sbjct: 361 GQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENR 397



 Score =  117 bits (293), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 81/304 (26%), Positives = 150/304 (49%), Gaps = 2/304 (0%)

Query: 381 KLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIH 440
           KL D+ +R     +  T+N LI          +AL++   M   GCEPD VTY TLI   
Sbjct: 192 KLFDEHLRFQSCNDTKTFNILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGF 251

Query: 441 AKAGFLDVAMDMYKKMQAAGL-SPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPN 499
            K+  L+ A +M+K +++  + SPD  TY+ +I+   KAG ++ A  L  +M+  G  P 
Sbjct: 252 CKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPT 311

Query: 500 LVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFA 559
            VT+N+++   AKA    +A ++   M + G  PD VT++ +++     G + +   ++ 
Sbjct: 312 NVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWE 371

Query: 560 EMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVG 619
           EM  +   P+   Y +L++       + KA E    +    + P     N ++  F + G
Sbjct: 372 EMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAG 431

Query: 620 QLSDAYHLLQGMLNLGLKPSLQTYT-LLLSCCTEARSPYDMGFCHELMAVSGHPAHMFLL 678
           ++++A  +++ M     KP   T+T L++  C + R    +   H+++A+   P  + + 
Sbjct: 432 KVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVS 491

Query: 679 SMPS 682
           S+ S
Sbjct: 492 SLLS 495


>gi|449454139|ref|XP_004144813.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09820-like [Cucumis sativus]
 gi|449524964|ref|XP_004169491.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09820-like [Cucumis sativus]
          Length = 611

 Score =  146 bits (369), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 111/440 (25%), Positives = 210/440 (47%), Gaps = 17/440 (3%)

Query: 333 VLKQLQDHTVALGFFNWLRRQAGFKHDEHTYTT--MVGILGRARQFGAINKLLDQMVRDG 390
           VL  +++    LG     +R   +++     +   ++  L +  +FG +  +  +M+R  
Sbjct: 167 VLAYVENSKTVLGL-EAFKRAGDYRYKLSVLSCNPLLSALVKENEFGGVEFVYKEMIRRK 225

Query: 391 CQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAK---AGFLD 447
             PN++T+N +I+   +   LN+A DV   M+V G  P+ VTY TLID + K    G + 
Sbjct: 226 ISPNLITFNTVINGLCKVGKLNKAGDVVDDMKVWGFWPNVVTYNTLIDGYCKMGRVGKMY 285

Query: 448 VAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMI 507
            A  + K+M    +SP++ T++V+I+   K  +L AA ++F EM +QG  P +VTYN ++
Sbjct: 286 KADAILKEMVENKVSPNSVTFNVLIDGFCKDENLSAALKVFEEMQSQGLKPTVVTYNSLV 345

Query: 508 ALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHC--GYLDEAEAVFAEMRRKN 565
                      A  L  +M ++  +P+ +TY+ ++   G+C    L+EA  +F  + ++ 
Sbjct: 346 NGLCNEGKLNEAKVLLDEMLSSNLKPNVITYNALIN--GYCKKKLLEEARELFDNIGKQG 403

Query: 566 WVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAY 625
             P+   +  L+  + K G + +A+   + ML+ G  PN  T N L+  F R G++ +  
Sbjct: 404 LTPNVITFNTLLHGYCKFGKMEEAFLLQKVMLEKGFLPNASTYNCLIVGFCREGKMEEVK 463

Query: 626 HLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMG-FCHELMAVSGHPAHMFLLSMPSPG 684
           +LL  M   G+K    TY +L+S   E + P        E++     P+H+    + +  
Sbjct: 464 NLLNEMQCRGVKADTVTYNILISAWCEKKEPKKAARLIDEMLDKGLKPSHLTYNILLNGY 523

Query: 685 PDGQNVRDHVGSFLEMMHSEDRESKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPD 744
               N+R  + +  + M  E R +     + ++    + G  E+A  +     +K + P+
Sbjct: 524 CMEGNLRAAL-NLRKQMEKEGRWANVVTYNVLIQGYCRKGKLEDANGLLNEMLEKGLIPN 582

Query: 745 AVKEKGMSYWLINLHVMSDG 764
                  +Y +I   +M  G
Sbjct: 583 RT-----TYEIIKEEMMEKG 597



 Score =  136 bits (343), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 99/382 (25%), Positives = 172/382 (45%), Gaps = 67/382 (17%)

Query: 339 DHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVR--DGCQ---- 392
           D  + L +FNW RR+    +       ++ +L  A+ +  I  +LD  V+    C     
Sbjct: 86  DPLLVLRYFNWSRRELNVNYSIELICRLLNLLANAKHYPKIRSILDSFVKGETNCSISLI 145

Query: 393 ------------PNVVTYNRLIHSYGRANYLNEALDVFK-------QMQVVGCE------ 427
                        N +  + L+ +Y   +     L+ FK       ++ V+ C       
Sbjct: 146 FHSLSVCSGQFCANSIIADMLVLAYVENSKTVLGLEAFKRAGDYRYKLSVLSCNPLLSAL 205

Query: 428 ----------------------PDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDT 465
                                 P+ +T+ T+I+   K G L+ A D+   M+  G  P+ 
Sbjct: 206 VKENEFGGVEFVYKEMIRRKISPNLITFNTVINGLCKVGKLNKAGDVVDDMKVWGFWPNV 265

Query: 466 FTYSVIIN--C-LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKL 522
            TY+ +I+  C +G+ G +  A  +  EMV     PN VT+N++I    K  N  +ALK+
Sbjct: 266 VTYNTLIDGYCKMGRVGKMYKADAILKEMVENKVSPNSVTFNVLIDGFCKDENLSAALKV 325

Query: 523 YRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGK 582
           + +MQ+ G +P  VTY+ ++  L + G L+EA+ +  EM   N  P+   Y  L++ + K
Sbjct: 326 FEEMQSQGLKPTVVTYNSLVNGLCNEGKLNEAKVLLDEMLSSNLKPNVITYNALINGYCK 385

Query: 583 AGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQT 642
              + +A E ++ + + GL PNV T N+LL  + + G++ +A+ L + ML  G  P+  T
Sbjct: 386 KKLLEEARELFDNIGKQGLTPNVITFNTLLHGYCKFGKMEEAFLLQKVMLEKGFLPNAST 445

Query: 643 YTLLLSCCTEARSPYDMGFCHE 664
           Y  L+           +GFC E
Sbjct: 446 YNCLI-----------VGFCRE 456


>gi|115445449|ref|NP_001046504.1| Os02g0266200 [Oryza sativa Japonica Group]
 gi|50251963|dbj|BAD27898.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|113536035|dbj|BAF08418.1| Os02g0266200 [Oryza sativa Japonica Group]
 gi|125581581|gb|EAZ22512.1| hypothetical protein OsJ_06176 [Oryza sativa Japonica Group]
 gi|215704610|dbj|BAG94238.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|215737116|dbj|BAG96045.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 632

 Score =  146 bits (369), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 102/392 (26%), Positives = 181/392 (46%), Gaps = 40/392 (10%)

Query: 267 VSERFSKPS-REMKIPAGLAPFSRHFASTGNVVESVSRILRQWKWGPLAEEALGNTNYSM 325
           + + F  PS R     A L+P  R+  S   + E   RIL+ +KWGP AE AL      +
Sbjct: 31  IVQMFRTPSPRNEDAVAALSP--RYTNSVRVLDERFIRILKIFKWGPDAERALEVLMLRV 88

Query: 326 DAYQANQVLKQLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQ 385
           D +   +V+K      V + FF W  ++  ++HD  TY  ++  L    Q+G + K++ +
Sbjct: 89  DHWLVREVMKTDVGVNVKMQFFRWAAKKRNYQHDTSTYMALIHCLELVEQYGEMWKMIQE 148

Query: 386 MVRDG-CQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAG 444
           MVR   C    +  +++I   G A  + +A+ +F Q++   C+P            A+A 
Sbjct: 149 MVRSPICVVTPMELSQVIRMLGNAKMIGKAITIFYQIKARKCQPT-----------AQA- 196

Query: 445 FLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQG-CIPNLVTY 503
                                  Y+ +I  L   G  +  H+L+ EM N+G C P+ VTY
Sbjct: 197 -----------------------YNSMIIMLIHEGQYEKVHELYNEMSNEGHCHPDTVTY 233

Query: 504 NIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRR 563
           + +I+   K     SA++L  +M+  G +P    Y++++ +      +  A ++F EMR 
Sbjct: 234 SALISAFCKLGRQDSAIRLLNEMKENGMQPTAKIYTMIISLFFKLDNVHGALSLFEEMRY 293

Query: 564 KNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSD 623
               PD   Y  L+   GKAG + +A+ +Y  M +   +P+    N++++   + G+L D
Sbjct: 294 MYCRPDVFTYTELIRGLGKAGRIDEAYHFYHEMQREDCKPDTVVMNNMINFLGKAGRLDD 353

Query: 624 AYHLLQGMLNLGLKPSLQTYTLLLSCCTEARS 655
              L + M      P++ TY  ++    E++S
Sbjct: 354 GLKLFEEMGVSHCIPNVVTYNTIIKALFESKS 385



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 98/349 (28%), Positives = 158/349 (45%), Gaps = 38/349 (10%)

Query: 346 FFNWLRRQAGFKHDEHTYTTMVGILGR-ARQFGAINKLLDQMVRDGCQPNVVTYNRLIHS 404
            +N +  +     D  TY+ ++    +  RQ  AI +LL++M  +G QP    Y  +I  
Sbjct: 216 LYNEMSNEGHCHPDTVTYSALISAFCKLGRQDSAI-RLLNEMKENGMQPTAKIYTMIISL 274

Query: 405 YGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPD 464
           + + + ++ AL +F++M+ + C PD  TY  LI    KAG +D A   Y +MQ     PD
Sbjct: 275 FFKLDNVHGALSLFEEMRYMYCRPDVFTYTELIRGLGKAGRIDEAYHFYHEMQREDCKPD 334

Query: 465 TFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIA--LQAKAR-------- 514
           T   + +IN LGKAG L    +LF EM    CIPN+VTYN +I    ++K+R        
Sbjct: 335 TVVMNNMINFLGKAGRLDDGLKLFEEMGVSHCIPNVVTYNTIIKALFESKSRVSEVFSWF 394

Query: 515 --------------------------NYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHC 548
                                       + A+ L  +M   GF P    Y  +++ LG  
Sbjct: 395 ERMKGSGISPSPFTYSILIDGFCKTNRIEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKA 454

Query: 549 GYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTC 608
              D A  +F E++         VY +++   GKAG +  A   ++ M + G  PNV   
Sbjct: 455 KRYDLACELFQELKENCGSSSARVYAVMIKHLGKAGRLDDAINLFDEMSKLGCTPNVYAY 514

Query: 609 NSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPY 657
           N+L+S   R   L +A   ++ M   G  P + +Y ++L+   +   P+
Sbjct: 515 NALMSGLARACMLDEALTTMRKMQEHGCLPDINSYNIILNGLAKTGGPH 563



 Score =  136 bits (343), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 91/314 (28%), Positives = 160/314 (50%), Gaps = 6/314 (1%)

Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLI 402
           AL  F  +R     + D  TYT ++  LG+A +         +M R+ C+P+ V  N +I
Sbjct: 284 ALSLFEEMRYMYC-RPDVFTYTELIRGLGKAGRIDEAYHFYHEMQREDCKPDTVVMNNMI 342

Query: 403 HSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLID--IHAKAGFLDVAMDMYKKMQAAG 460
           +  G+A  L++ L +F++M V  C P+ VTY T+I     +K+   +V    +++M+ +G
Sbjct: 343 NFLGKAGRLDDGLKLFEEMGVSHCIPNVVTYNTIIKALFESKSRVSEV-FSWFERMKGSG 401

Query: 461 LSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSAL 520
           +SP  FTYS++I+   K   ++ A  L  EM  +G  P    Y  +I    KA+ Y  A 
Sbjct: 402 ISPSPFTYSILIDGFCKTNRIEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLAC 461

Query: 521 KLYRDM-QNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDL 579
           +L++++ +N G    +V Y+++++ LG  G LD+A  +F EM +    P+   Y  L+  
Sbjct: 462 ELFQELKENCGSSSARV-YAVMIKHLGKAGRLDDAINLFDEMSKLGCTPNVYAYNALMSG 520

Query: 580 WGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPS 639
             +A  + +A      M + G  P++ + N +L+   + G    A  +L  M N  +KP 
Sbjct: 521 LARACMLDEALTTMRKMQEHGCLPDINSYNIILNGLAKTGGPHRAMEMLTNMKNSTIKPD 580

Query: 640 LQTYTLLLSCCTEA 653
             +Y  +LS  + A
Sbjct: 581 AVSYNTVLSALSHA 594



 Score =  130 bits (327), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 88/307 (28%), Positives = 145/307 (47%), Gaps = 2/307 (0%)

Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLI 402
           A  F++ ++R+   K D      M+  LG+A +     KL ++M    C PNVVTYN +I
Sbjct: 319 AYHFYHEMQRE-DCKPDTVVMNNMINFLGKAGRLDDGLKLFEEMGVSHCIPNVVTYNTII 377

Query: 403 HS-YGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGL 461
            + +   + ++E    F++M+  G  P   TY  LID   K   ++ AM + ++M   G 
Sbjct: 378 KALFESKSRVSEVFSWFERMKGSGISPSPFTYSILIDGFCKTNRIEKAMMLLEEMDEKGF 437

Query: 462 SPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALK 521
            P    Y  +I+ LGKA     A +LF E+       +   Y +MI    KA     A+ 
Sbjct: 438 PPCPAAYCSLIDALGKAKRYDLACELFQELKENCGSSSARVYAVMIKHLGKAGRLDDAIN 497

Query: 522 LYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWG 581
           L+ +M   G  P+   Y+ +M  L     LDEA     +M+    +PD   Y ++++   
Sbjct: 498 LFDEMSKLGCTPNVYAYNALMSGLARACMLDEALTTMRKMQEHGCLPDINSYNIILNGLA 557

Query: 582 KAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQ 641
           K G   +A E    M  + ++P+  + N++LSA    G   +A  L++ M  LG +  L 
Sbjct: 558 KTGGPHRAMEMLTNMKNSTIKPDAVSYNTVLSALSHAGMFEEAAELMKEMNALGFEYDLI 617

Query: 642 TYTLLLS 648
           TY+ +L 
Sbjct: 618 TYSSILE 624



 Score =  109 bits (272), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 57/194 (29%), Positives = 105/194 (54%)

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
           + GF      Y +++  LG+A+++    +L  ++  +    +   Y  +I   G+A  L+
Sbjct: 434 EKGFPPCPAAYCSLIDALGKAKRYDLACELFQELKENCGSSSARVYAVMIKHLGKAGRLD 493

Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
           +A+++F +M  +GC P+   Y  L+   A+A  LD A+   +KMQ  G  PD  +Y++I+
Sbjct: 494 DAINLFDEMSKLGCTPNVYAYNALMSGLARACMLDEALTTMRKMQEHGCLPDINSYNIIL 553

Query: 473 NCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFE 532
           N L K G    A ++   M N    P+ V+YN +++  + A  ++ A +L ++M   GFE
Sbjct: 554 NGLAKTGGPHRAMEMLTNMKNSTIKPDAVSYNTVLSALSHAGMFEEAAELMKEMNALGFE 613

Query: 533 PDKVTYSIVMEVLG 546
            D +TYS ++E +G
Sbjct: 614 YDLITYSSILEAIG 627



 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 34/135 (25%), Positives = 67/135 (49%), Gaps = 1/135 (0%)

Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLI 402
           A+  F+ + +  G   + + Y  ++  L RA         + +M   GC P++ +YN ++
Sbjct: 495 AINLFDEMSK-LGCTPNVYAYNALMSGLARACMLDEALTTMRKMQEHGCLPDINSYNIIL 553

Query: 403 HSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLS 462
           +   +    + A+++   M+    +PD V+Y T++   + AG  + A ++ K+M A G  
Sbjct: 554 NGLAKTGGPHRAMEMLTNMKNSTIKPDAVSYNTVLSALSHAGMFEEAAELMKEMNALGFE 613

Query: 463 PDTFTYSVIINCLGK 477
            D  TYS I+  +GK
Sbjct: 614 YDLITYSSILEAIGK 628


>gi|224113307|ref|XP_002316451.1| predicted protein [Populus trichocarpa]
 gi|222865491|gb|EEF02622.1| predicted protein [Populus trichocarpa]
          Length = 707

 Score =  146 bits (369), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 91/301 (30%), Positives = 153/301 (50%), Gaps = 3/301 (0%)

Query: 349 WLRRQAG--FKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYG 406
           W+++  G        TY  ++   GR   F    ++L++M  +G +PNV++Y  LI+   
Sbjct: 334 WVKKMVGKGIAPSVETYNILIDGYGRLCVFSRCFQILEEMEENGEKPNVISYGSLINCLC 393

Query: 407 RANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTF 466
           +   + EA  V + M   G  P+   Y  LID     G L  A+  + +M   G+     
Sbjct: 394 KDGKILEAEMVLRDMVGRGVLPNANIYNMLIDGSCTVGKLREALRFFDEMSKNGIGATIV 453

Query: 467 TYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDM 526
           TY+ +I  L K G L+ A ++F  + + G  P+++TYN +I+  + A N Q  L+LY  M
Sbjct: 454 TYNSLIKGLCKMGKLKEAEEMFFLITSTGHCPDVITYNSLISGYSNAGNSQKCLELYETM 513

Query: 527 QNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNV 586
           +  G +P   T+  ++      G +   E +F EM + N  PD  VY  ++  + + G+V
Sbjct: 514 KKLGLKPTINTFHPLISGCSKEG-IKLKETLFNEMLQMNLSPDRVVYNAMIHCYQETGHV 572

Query: 587 RKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLL 646
           +KA+   + M+  G+RP+  T NSL+   L+ G+LS+   L+  M   GL P   TY+LL
Sbjct: 573 QKAFSLQKEMVDMGVRPDNKTYNSLILGHLKEGKLSETKDLVDDMKAKGLIPEADTYSLL 632

Query: 647 L 647
           +
Sbjct: 633 I 633



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 79/258 (30%), Positives = 129/258 (50%), Gaps = 5/258 (1%)

Query: 381 KLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIH 440
           +  D+M ++G    +VTYN LI    +   L EA ++F  +   G  PD +TY +LI  +
Sbjct: 438 RFFDEMSKNGIGATIVTYNSLIKGLCKMGKLKEAEEMFFLITSTGHCPDVITYNSLISGY 497

Query: 441 AKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNL 500
           + AG     +++Y+ M+  GL P   T+  +I+   K G ++    LF EM+     P+ 
Sbjct: 498 SNAGNSQKCLELYETMKKLGLKPTINTFHPLISGCSKEG-IKLKETLFNEMLQMNLSPDR 556

Query: 501 VTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHC--GYLDEAEAVF 558
           V YN MI    +  + Q A  L ++M + G  PD  TY+ +  +LGH   G L E + + 
Sbjct: 557 VVYNAMIHCYQETGHVQKAFSLQKEMVDMGVRPDNKTYNSL--ILGHLKEGKLSETKDLV 614

Query: 559 AEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRV 618
            +M+ K  +P+   Y LL+       +   A+ WY  ML+ G  PNV  CN L +   + 
Sbjct: 615 DDMKAKGLIPEADTYSLLIQGHCDLKDFNGAYVWYREMLENGFLPNVCICNELSTGLRKD 674

Query: 619 GQLSDAYHLLQGMLNLGL 636
           G+L +A  +   M+  G+
Sbjct: 675 GRLQEAQSICSEMIANGM 692



 Score =  125 bits (315), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 100/401 (24%), Positives = 182/401 (45%), Gaps = 8/401 (1%)

Query: 350 LRRQA---GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYG 406
           L R+A   G K D +T + ++  L +  +     ++L  +V  G  P  V YN +++ Y 
Sbjct: 229 LYREAIGKGVKIDNYTCSILLNGLCKEGKVEKAEEVLKSLVEHGLVPGEVIYNTIVNGYC 288

Query: 407 RANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTF 466
           +   ++ A+   +QM+  G  P+ + + ++ID   +   +D A +  KKM   G++P   
Sbjct: 289 QIGDMDRAILTIEQMESRGLRPNCIAFNSVIDKFCEMQMIDKAEEWVKKMVGKGIAPSVE 348

Query: 467 TYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDM 526
           TY+++I+  G+        Q+  EM   G  PN+++Y  +I    K      A  + RDM
Sbjct: 349 TYNILIDGYGRLCVFSRCFQILEEMEENGEKPNVISYGSLINCLCKDGKILEAEMVLRDM 408

Query: 527 QNAGFEPDKVTYSIVMEVLGHC--GYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAG 584
              G  P+   Y+++++  G C  G L EA   F EM +         Y  L+    K G
Sbjct: 409 VGRGVLPNANIYNMLID--GSCTVGKLREALRFFDEMSKNGIGATIVTYNSLIKGLCKMG 466

Query: 585 NVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYT 644
            +++A E +  +   G  P+V T NSL+S +   G       L + M  LGLKP++ T+ 
Sbjct: 467 KLKEAEEMFFLITSTGHCPDVITYNSLISGYSNAGNSQKCLELYETMKKLGLKPTINTFH 526

Query: 645 LLLSCCTEARSPYDMGFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSE 704
            L+S C++          +E++ ++  P  +   +M     +  +V+       EM+   
Sbjct: 527 PLISGCSKEGIKLKETLFNEMLQMNLSPDRVVYNAMIHCYQETGHVQKAFSLQKEMVDMG 586

Query: 705 DRESKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDA 745
            R   +     ++  L +  L E    V ++ A K + P+A
Sbjct: 587 VRPDNKTYNSLILGHLKEGKLSETKDLVDDMKA-KGLIPEA 626



 Score =  119 bits (299), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 99/418 (23%), Positives = 188/418 (44%), Gaps = 14/418 (3%)

Query: 336 QLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNV 395
           +L D  +A+  F  ++R+     +   Y  ++G L + ++     KL  +M      PN 
Sbjct: 78  KLGDLKLAMELFETMKRRK-VVPNVFVYNVLIGGLCKEKRIRDAEKLFGEMSVRNLVPNR 136

Query: 396 VTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKK 455
           VT+N LI  Y +A  ++ A+ + ++M+    EP  +T+ +L+    KA  ++ A  M  +
Sbjct: 137 VTFNTLIDGYCKAGEVDVAIGLRERMKKEKVEPSIITFNSLLSGLCKARRIEEARCMLNE 196

Query: 456 MQAAGLSPDTFTYSVIINCLGKAGH-LQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKAR 514
           ++  G  PD FTYS+I + L K+     AA  L+ E + +G   +  T +I++    K  
Sbjct: 197 IKCNGFVPDGFTYSIIFDGLLKSDDGAGAALDLYREAIGKGVKIDNYTCSILLNGLCKEG 256

Query: 515 NYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYG 574
             + A ++ + +   G  P +V Y+ ++      G +D A     +M  +   P+   + 
Sbjct: 257 KVEKAEEVLKSLVEHGLVPGEVIYNTIVNGYCQIGDMDRAILTIEQMESRGLRPNCIAFN 316

Query: 575 LLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNL 634
            ++D + +   + KA EW + M+  G+ P+V T N L+  + R+   S  + +L+ M   
Sbjct: 317 SVIDKFCEMQMIDKAEEWVKKMVGKGIAPSVETYNILIDGYGRLCVFSRCFQILEEMEEN 376

Query: 635 GLKPSLQTYTLLLSCCTEARSPYDMGFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHV 694
           G KP++ +Y  L++C  +     +       M   G   +  + +M   G         V
Sbjct: 377 GEKPNVISYGSLINCLCKDGKILEAEMVLRDMVGRGVLPNANIYNMLIDGS------CTV 430

Query: 695 GSFLEMMHSEDRESKRGLVDAVVDF------LHKSGLKEEAGSVWEVAAQKNVYPDAV 746
           G   E +   D  SK G+   +V +      L K G  +EA  ++ +       PD +
Sbjct: 431 GKLREALRFFDEMSKNGIGATIVTYNSLIKGLCKMGKLKEAEEMFFLITSTGHCPDVI 488



 Score =  118 bits (296), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 71/284 (25%), Positives = 141/284 (49%), Gaps = 1/284 (0%)

Query: 366 MVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVG 425
           ++ +   ++    +++L D M ++G  P+      ++ S   +   +  LD+FK+M  +G
Sbjct: 2   LLSVCSESKMHSQVSELYDFMRQEGRLPSFGYVRMIVESLVESKKFDNVLDLFKEMVGLG 61

Query: 426 CEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAH 485
             PD++ Y   +    K G L +AM++++ M+   + P+ F Y+V+I  L K   ++ A 
Sbjct: 62  FRPDKLVYGRAMLAAVKLGDLKLAMELFETMKRRKVVPNVFVYNVLIGGLCKEKRIRDAE 121

Query: 486 QLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVL 545
           +LF EM  +  +PN VT+N +I    KA     A+ L   M+    EP  +T++ ++  L
Sbjct: 122 KLFGEMSVRNLVPNRVTFNTLIDGYCKAGEVDVAIGLRERMKKEKVEPSIITFNSLLSGL 181

Query: 546 GHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVD-LWGKAGNVRKAWEWYEAMLQAGLRPN 604
                ++EA  +  E++   +VPD   Y ++ D L         A + Y   +  G++ +
Sbjct: 182 CKARRIEEARCMLNEIKCNGFVPDGFTYSIIFDGLLKSDDGAGAALDLYREAIGKGVKID 241

Query: 605 VPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
             TC+ LL+   + G++  A  +L+ ++  GL P    Y  +++
Sbjct: 242 NYTCSILLNGLCKEGKVEKAEEVLKSLVEHGLVPGEVIYNTIVN 285



 Score =  115 bits (287), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 88/391 (22%), Positives = 184/391 (47%), Gaps = 2/391 (0%)

Query: 355 GFKHDEHTYTTMV-GILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNE 413
           GF  D  TY+ +  G+L      GA   L  + +  G + +  T + L++   +   + +
Sbjct: 201 GFVPDGFTYSIIFDGLLKSDDGAGAALDLYREAIGKGVKIDNYTCSILLNGLCKEGKVEK 260

Query: 414 ALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIIN 473
           A +V K +   G  P  V Y T+++ + + G +D A+   ++M++ GL P+   ++ +I+
Sbjct: 261 AEEVLKSLVEHGLVPGEVIYNTIVNGYCQIGDMDRAILTIEQMESRGLRPNCIAFNSVID 320

Query: 474 CLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEP 533
              +   +  A +   +MV +G  P++ TYNI+I    +   +    ++  +M+  G +P
Sbjct: 321 KFCEMQMIDKAEEWVKKMVGKGIAPSVETYNILIDGYGRLCVFSRCFQILEEMEENGEKP 380

Query: 534 DKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWY 593
           + ++Y  ++  L   G + EAE V  +M  +  +P+  +Y +L+D     G +R+A  ++
Sbjct: 381 NVISYGSLINCLCKDGKILEAEMVLRDMVGRGVLPNANIYNMLIDGSCTVGKLREALRFF 440

Query: 594 EAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEA 653
           + M + G+   + T NSL+    ++G+L +A  +   + + G  P + TY  L+S  + A
Sbjct: 441 DEMSKNGIGATIVTYNSLIKGLCKMGKLKEAEEMFFLITSTGHCPDVITYNSLISGYSNA 500

Query: 654 RSPYDMGFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRESKRGLV 713
            +       +E M   G    +        G   + ++     F EM+   +    R + 
Sbjct: 501 GNSQKCLELYETMKKLGLKPTINTFHPLISGCSKEGIKLKETLFNEMLQM-NLSPDRVVY 559

Query: 714 DAVVDFLHKSGLKEEAGSVWEVAAQKNVYPD 744
           +A++    ++G  ++A S+ +      V PD
Sbjct: 560 NAMIHCYQETGHVQKAFSLQKEMVDMGVRPD 590



 Score = 79.3 bits (194), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 63/253 (24%), Positives = 108/253 (42%), Gaps = 35/253 (13%)

Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLI 402
           AL FF+ + +  G      TY +++  L +  +     ++   +   G  P+V+TYN LI
Sbjct: 436 ALRFFDEMSKN-GIGATIVTYNSLIKGLCKMGKLKEAEEMFFLITSTGHCPDVITYNSLI 494

Query: 403 HSYGRANYLNEALDVFKQMQ--------------VVGCE--------------------P 428
             Y  A    + L++++ M+              + GC                     P
Sbjct: 495 SGYSNAGNSQKCLELYETMKKLGLKPTINTFHPLISGCSKEGIKLKETLFNEMLQMNLSP 554

Query: 429 DRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLF 488
           DRV Y  +I  + + G +  A  + K+M   G+ PD  TY+ +I    K G L     L 
Sbjct: 555 DRVVYNAMIHCYQETGHVQKAFSLQKEMVDMGVRPDNKTYNSLILGHLKEGKLSETKDLV 614

Query: 489 CEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHC 548
            +M  +G IP   TY+++I      +++  A   YR+M   GF P+    + +   L   
Sbjct: 615 DDMKAKGLIPEADTYSLLIQGHCDLKDFNGAYVWYREMLENGFLPNVCICNELSTGLRKD 674

Query: 549 GYLDEAEAVFAEM 561
           G L EA+++ +EM
Sbjct: 675 GRLQEAQSICSEM 687



 Score = 77.8 bits (190), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 47/169 (27%), Positives = 85/169 (50%)

Query: 486 QLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVL 545
           +L+  M  +G +P+     +++    +++ + + L L+++M   GF PDK+ Y   M   
Sbjct: 17  ELYDFMRQEGRLPSFGYVRMIVESLVESKKFDNVLDLFKEMVGLGFRPDKLVYGRAMLAA 76

Query: 546 GHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNV 605
              G L  A  +F  M+R+  VP+  VY +L+    K   +R A + +  M    L PN 
Sbjct: 77  VKLGDLKLAMELFETMKRRKVVPNVFVYNVLIGGLCKEKRIRDAEKLFGEMSVRNLVPNR 136

Query: 606 PTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEAR 654
            T N+L+  + + G++  A  L + M    ++PS+ T+  LLS   +AR
Sbjct: 137 VTFNTLIDGYCKAGEVDVAIGLRERMKKEKVEPSIITFNSLLSGLCKAR 185



 Score = 71.6 bits (174), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 45/151 (29%), Positives = 72/151 (47%)

Query: 382 LLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHA 441
           L ++M++    P+ V YN +IH Y    ++ +A  + K+M  +G  PD  TY +LI  H 
Sbjct: 543 LFNEMLQMNLSPDRVVYNAMIHCYQETGHVQKAFSLQKEMVDMGVRPDNKTYNSLILGHL 602

Query: 442 KAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLV 501
           K G L    D+   M+A GL P+  TYS++I           A+  + EM+  G +PN+ 
Sbjct: 603 KEGKLSETKDLVDDMKAKGLIPEADTYSLLIQGHCDLKDFNGAYVWYREMLENGFLPNVC 662

Query: 502 TYNIMIALQAKARNYQSALKLYRDMQNAGFE 532
             N +     K    Q A  +  +M   G +
Sbjct: 663 ICNELSTGLRKDGRLQEAQSICSEMIANGMD 693



 Score = 49.7 bits (117), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 35/143 (24%), Positives = 67/143 (46%)

Query: 505 IMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRK 564
           +++++ ++++ +    +LY  M+  G  P      +++E L      D    +F EM   
Sbjct: 1   MLLSVCSESKMHSQVSELYDFMRQEGRLPSFGYVRMIVESLVESKKFDNVLDLFKEMVGL 60

Query: 565 NWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDA 624
            + PD+ VYG  +    K G+++ A E +E M +  + PNV   N L+    +  ++ DA
Sbjct: 61  GFRPDKLVYGRAMLAAVKLGDLKLAMELFETMKRRKVVPNVFVYNVLIGGLCKEKRIRDA 120

Query: 625 YHLLQGMLNLGLKPSLQTYTLLL 647
             L   M    L P+  T+  L+
Sbjct: 121 EKLFGEMSVRNLVPNRVTFNTLI 143


>gi|242048026|ref|XP_002461759.1| hypothetical protein SORBIDRAFT_02g007610 [Sorghum bicolor]
 gi|241925136|gb|EER98280.1| hypothetical protein SORBIDRAFT_02g007610 [Sorghum bicolor]
          Length = 896

 Score =  146 bits (369), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 105/400 (26%), Positives = 184/400 (46%), Gaps = 15/400 (3%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           R+  F+     YT ++G +  ARQ     +LL QM   G +  V  +  L+ +  R   +
Sbjct: 174 RRLKFRPAFSAYTVLIGAMAEARQPERALELLRQMQEVGYEVGVPLFTTLVRALAREGRV 233

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
             AL +  +++    EPD V Y   ID   KAG +D+A   + ++++ GL PD  +Y+ +
Sbjct: 234 EGALALVDEVKGSCLEPDIVLYNVCIDCFGKAGNVDMAWKFFHELKSQGLKPDDVSYTSM 293

Query: 472 INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF 531
           I  L KAG L  A +LF +M  +  +P    YN MI     A  +++A KL   ++  G 
Sbjct: 294 IWVLCKAGRLSEAEELFGQMETERAVPCAYAYNTMIMGYGSAGQFENAYKLLDQLKERGC 353

Query: 532 EPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWE 591
            P  V+++ ++  LG    +DEA  +F  M +K+  P+   Y +++D+   AG V +A+ 
Sbjct: 354 IPSVVSFNSILTCLGKKRKVDEALTLFEAM-KKDAEPNSSTYNIIIDMLCMAGKVEEAYM 412

Query: 592 WYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCT 651
             + M  AGL PN+ T N ++    +  +   AY + +     G  P+  TY  L+    
Sbjct: 413 IRDEMEHAGLFPNLLTVNIMVDRLCKAKKFEPAYEMFETASQRGCNPNSVTYCSLIDGLG 472

Query: 652 EARSPYDMGFCHELMAVSGHPAHMFLLS-------MPSPGPDGQNVRDHVGSFLEMMHSE 704
           +  +  D     E M  +GH A+  + +       M     DG  +        + M+  
Sbjct: 473 KKGNVDDAYRLFENMLDTGHNANPVVYTSLIRNFFMHGRKEDGHKI-------FKEMNRR 525

Query: 705 DRESKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPD 744
             +    L++  +D + K+G  E+  +++E        PD
Sbjct: 526 GCQPDLTLLNTYMDCVFKAGDVEKGRAIFEDIKGYGFLPD 565



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 105/448 (23%), Positives = 199/448 (44%), Gaps = 12/448 (2%)

Query: 342 VALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRL 401
           +A  FF+ L+ Q G K D+ +YT+M+ +L +A +     +L  QM  +   P    YN +
Sbjct: 270 MAWKFFHELKSQ-GLKPDDVSYTSMIWVLCKAGRLSEAEELFGQMETERAVPCAYAYNTM 328

Query: 402 IHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGL 461
           I  YG A     A  +  Q++  GC P  V++ +++    K   +D A+ +++ M+    
Sbjct: 329 IMGYGSAGQFENAYKLLDQLKERGCIPSVVSFNSILTCLGKKRKVDEALTLFEAMKKDA- 387

Query: 462 SPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALK 521
            P++ TY++II+ L  AG ++ A+ +  EM + G  PNL+T NIM+    KA+ ++ A +
Sbjct: 388 EPNSSTYNIIIDMLCMAGKVEEAYMIRDEMEHAGLFPNLLTVNIMVDRLCKAKKFEPAYE 447

Query: 522 LYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWG 581
           ++      G  P+ VTY  +++ LG  G +D+A  +F  M       +  VY  L+  + 
Sbjct: 448 MFETASQRGCNPNSVTYCSLIDGLGKKGNVDDAYRLFENMLDTGHNANPVVYTSLIRNFF 507

Query: 582 KAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQ 641
             G      + ++ M + G +P++   N+ +    + G +     + + +   G  P ++
Sbjct: 508 MHGRKEDGHKIFKEMNRRGCQPDLTLLNTYMDCVFKAGDVEKGRAIFEDIKGYGFLPDVR 567

Query: 642 TYTLLLSCCTEARSPYDMGFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMM 701
           +Y++L+   T+A    +       M   G        +    G       D     LE M
Sbjct: 568 SYSILIHGLTKAGQARETSSIFHAMKQQGFALDARAYNAVVDGFCKSGKLDKAYEVLEEM 627

Query: 702 HSEDRESKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAVKEKGMSYWLINLHVM 761
             +          +++D L K    +EA  ++E A          K KG+   +I    +
Sbjct: 628 KVKRVPPTVATYGSIIDGLAKIDRLDEAYMLFEEA----------KSKGIELNVIVYSSL 677

Query: 762 SDGTAVIALSRTLAWFRKQMLISGVGPS 789
            DG   +          ++M+  G+ P+
Sbjct: 678 IDGFGKVGRIDEAYLILEEMMKKGLTPN 705



 Score =  139 bits (351), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 106/427 (24%), Positives = 182/427 (42%), Gaps = 36/427 (8%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           ++ G++     +TT+V  L R  +      L+D++     +P++V YN  I  +G+A  +
Sbjct: 209 QEVGYEVGVPLFTTLVRALAREGRVEGALALVDEVKGSCLEPDIVLYNVCIDCFGKAGNV 268

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
           + A   F +++  G +PD V+Y ++I +  KAG L  A +++ +M+     P  + Y+ +
Sbjct: 269 DMAWKFFHELKSQGLKPDDVSYTSMIWVLCKAGRLSEAEELFGQMETERAVPCAYAYNTM 328

Query: 472 INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF 531
           I   G AG  + A++L  ++  +GCIP++V++N ++    K R    AL L+  M+    
Sbjct: 329 IMGYGSAGQFENAYKLLDQLKERGCIPSVVSFNSILTCLGKKRKVDEALTLFEAMKKDA- 387

Query: 532 EPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWE 591
           EP+  TY+I++++L   G ++EA  +  EM      P+     ++VD   KA     A+E
Sbjct: 388 EPNSSTYNIIIDMLCMAGKVEEAYMIRDEMEHAGLFPNLLTVNIMVDRLCKAKKFEPAYE 447

Query: 592 WYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNL----------------- 634
            +E   Q G  PN  T  SL+    + G + DAY L + ML+                  
Sbjct: 448 MFETASQRGCNPNSVTYCSLIDGLGKKGNVDDAYRLFENMLDTGHNANPVVYTSLIRNFF 507

Query: 635 ------------------GLKPSLQTYTLLLSCCTEARSPYDMGFCHELMAVSGHPAHMF 676
                             G +P L      + C  +A          E +   G    + 
Sbjct: 508 MHGRKEDGHKIFKEMNRRGCQPDLTLLNTYMDCVFKAGDVEKGRAIFEDIKGYGFLPDVR 567

Query: 677 LLSMPSPGPDGQNVRDHVGSFLEMMHSEDRESKRGLVDAVVDFLHKSGLKEEAGSVWEVA 736
             S+   G           S    M  +         +AVVD   KSG  ++A  V E  
Sbjct: 568 SYSILIHGLTKAGQARETSSIFHAMKQQGFALDARAYNAVVDGFCKSGKLDKAYEVLEEM 627

Query: 737 AQKNVYP 743
             K V P
Sbjct: 628 KVKRVPP 634



 Score =  138 bits (348), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 104/399 (26%), Positives = 181/399 (45%), Gaps = 12/399 (3%)

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
            AG   +  T   MV  L +A++F    ++ +   + GC PN VTY  LI   G+   ++
Sbjct: 419 HAGLFPNLLTVNIMVDRLCKAKKFEPAYEMFETASQRGCNPNSVTYCSLIDGLGKKGNVD 478

Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
           +A  +F+ M   G   + V Y +LI      G  +    ++K+M   G  PD    +  +
Sbjct: 479 DAYRLFENMLDTGHNANPVVYTSLIRNFFMHGRKEDGHKIFKEMNRRGCQPDLTLLNTYM 538

Query: 473 NCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFE 532
           +C+ KAG ++    +F ++   G +P++ +Y+I+I    KA   +    ++  M+  GF 
Sbjct: 539 DCVFKAGDVEKGRAIFEDIKGYGFLPDVRSYSILIHGLTKAGQARETSSIFHAMKQQGFA 598

Query: 533 PDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEW 592
            D   Y+ V++     G LD+A  V  EM+ K   P    YG ++D   K   + +A+  
Sbjct: 599 LDARAYNAVVDGFCKSGKLDKAYEVLEEMKVKRVPPTVATYGSIIDGLAKIDRLDEAYML 658

Query: 593 YEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTE 652
           +E     G+  NV   +SL+  F +VG++ +AY +L+ M+  GL P++ T+  L+    +
Sbjct: 659 FEEAKSKGIELNVIVYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLMDALVK 718

Query: 653 ARSPYDMGFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRESKRGL 712
           A    +   C + M       + +  S+   G       +    F + M       K+GL
Sbjct: 719 AEEINEALICFQSMKEMKCSPNTYTYSILINGLCRVQKYNKAFVFWQEMQ------KQGL 772

Query: 713 VDAVVDF------LHKSGLKEEAGSVWEVAAQKNVYPDA 745
           V  VV +      L K G   +A S++E        PDA
Sbjct: 773 VPNVVTYTTMIAGLAKVGNITDACSLFERFKANGGTPDA 811



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 75/273 (27%), Positives = 131/273 (47%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           +Q GF  D   Y  +V    ++ +     ++L++M      P V TY  +I    + + L
Sbjct: 593 KQQGFALDARAYNAVVDGFCKSGKLDKAYEVLEEMKVKRVPPTVATYGSIIDGLAKIDRL 652

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
           +EA  +F++ +  G E + + Y +LID   K G +D A  + ++M   GL+P+ +T++ +
Sbjct: 653 DEAYMLFEEAKSKGIELNVIVYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSL 712

Query: 472 INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF 531
           ++ L KA  +  A   F  M    C PN  TY+I+I    + + Y  A   +++MQ  G 
Sbjct: 713 MDALVKAEEINEALICFQSMKEMKCSPNTYTYSILINGLCRVQKYNKAFVFWQEMQKQGL 772

Query: 532 EPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWE 591
            P+ VTY+ ++  L   G + +A ++F   +     PD   +  L++    A    +A+ 
Sbjct: 773 VPNVVTYTTMIAGLAKVGNITDACSLFERFKANGGTPDAASFNALIEGMSHANRAIEAYH 832

Query: 592 WYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDA 624
            +E     G R NV  C SLL A  +   L  A
Sbjct: 833 VFEETRLKGCRINVKACISLLDALNKAECLEQA 865



 Score =  123 bits (308), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 79/316 (25%), Positives = 150/316 (47%), Gaps = 7/316 (2%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           GF  D  +Y+ ++  L +A Q    + +   M + G   +   YN ++  + ++  L++A
Sbjct: 561 GFLPDVRSYSILIHGLTKAGQARETSSIFHAMKQQGFALDARAYNAVVDGFCKSGKLDKA 620

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
            +V ++M+V    P   TY ++ID  AK   LD A  ++++ ++ G+  +   YS +I+ 
Sbjct: 621 YEVLEEMKVKRVPPTVATYGSIIDGLAKIDRLDEAYMLFEEAKSKGIELNVIVYSSLIDG 680

Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPD 534
            GK G +  A+ +  EM+ +G  PN+ T+N ++    KA     AL  ++ M+     P+
Sbjct: 681 FGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLMDALVKAEEINEALICFQSMKEMKCSPN 740

Query: 535 KVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYE 594
             TYSI++  L      ++A   + EM+++  VP+   Y  ++    K GN+  A   +E
Sbjct: 741 TYTYSILINGLCRVQKYNKAFVFWQEMQKQGLVPNVVTYTTMIAGLAKVGNITDACSLFE 800

Query: 595 AMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEAR 654
                G  P+  + N+L+       +  +AYH+ +     G + +++    LL    +A 
Sbjct: 801 RFKANGGTPDAASFNALIEGMSHANRAIEAYHVFEETRLKGCRINVKACISLLDALNKAE 860

Query: 655 SPYDMGFCHELMAVSG 670
                  C E  AV G
Sbjct: 861 -------CLEQAAVVG 869



 Score =  112 bits (281), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 98/417 (23%), Positives = 192/417 (46%), Gaps = 44/417 (10%)

Query: 333 VLKQLQDHTVALGFFNWLRRQAGFKHD--EHTYTTMVGILGRARQFGAINKLLDQMVRDG 390
           VL+ L++ ++A  FF  L   A   H      Y  ++  L  +    A+ K+L++M   G
Sbjct: 87  VLRTLRNPSLAAPFF--LASSAASPHPLPADAYNAVLPFL--SHDLAAMEKVLEEMSVLG 142

Query: 391 CQ-PNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVA 449
              PN    + L+ +  R   L++A  V   M+ +   P    Y  LI   A+A   + A
Sbjct: 143 YGVPNPACAD-LVSALVRTRRLDDAERVIAAMRRLKFRPAFSAYTVLIGAMAEARQPERA 201

Query: 450 MDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIAL 509
           +++ ++MQ  G       ++ ++  L + G ++ A  L  E+      P++V YN+ I  
Sbjct: 202 LELLRQMQEVGYEVGVPLFTTLVRALAREGRVEGALALVDEVKGSCLEPDIVLYNVCIDC 261

Query: 510 QAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPD 569
             KA N   A K + ++++ G +PD V+Y+ ++ VL   G L EAE +F +M  +  VP 
Sbjct: 262 FGKAGNVDMAWKFFHELKSQGLKPDDVSYTSMIWVLCKAGRLSEAEELFGQMETERAVPC 321

Query: 570 EPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQ 629
              Y  ++  +G AG    A++  + + + G  P+V + NS+L+   +  ++ +A  L +
Sbjct: 322 AYAYNTMIMGYGSAGQFENAYKLLDQLKERGCIPSVVSFNSILTCLGKKRKVDEALTLFE 381

Query: 630 GMLNLGLKPSLQTYTLLLSCCTEARSPYDMGFCHELMAVSGHPAHMFLLSMPSPGPDGQN 689
            M     +P+  TY +++                +++ ++G     +++         ++
Sbjct: 382 AM-KKDAEPNSSTYNIII----------------DMLCMAGKVEEAYMI---------RD 415

Query: 690 VRDHVGSFLEMMHSEDRESKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAV 746
             +H G F  ++           V+ +VD L K+   E A  ++E A+Q+   P++V
Sbjct: 416 EMEHAGLFPNLLT----------VNIMVDRLCKAKKFEPAYEMFETASQRGCNPNSV 462



 Score = 85.5 bits (210), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 51/206 (24%), Positives = 100/206 (48%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           +  G + +   Y++++   G+  +      +L++M++ G  PNV T+N L+ +  +A  +
Sbjct: 663 KSKGIELNVIVYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLMDALVKAEEI 722

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
           NEAL  F+ M+ + C P+  TY  LI+   +    + A   +++MQ  GL P+  TY+ +
Sbjct: 723 NEALICFQSMKEMKCSPNTYTYSILINGLCRVQKYNKAFVFWQEMQKQGLVPNVVTYTTM 782

Query: 472 INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF 531
           I  L K G++  A  LF      G  P+  ++N +I   + A     A  ++ + +  G 
Sbjct: 783 IAGLAKVGNITDACSLFERFKANGGTPDAASFNALIEGMSHANRAIEAYHVFEETRLKGC 842

Query: 532 EPDKVTYSIVMEVLGHCGYLDEAEAV 557
             +      +++ L     L++A  V
Sbjct: 843 RINVKACISLLDALNKAECLEQAAVV 868


>gi|357499785|ref|XP_003620181.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495196|gb|AES76399.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 559

 Score =  146 bits (369), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 101/344 (29%), Positives = 164/344 (47%), Gaps = 13/344 (3%)

Query: 329 QANQVLKQLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVR 388
           Q +Q L Q  D  VALGF            ++ +Y T++  L +  Q  A  +LL ++  
Sbjct: 157 QIHQAL-QFHDKVVALGF----------HLNKVSYGTLINGLCKVGQTSAALQLLRRVDG 205

Query: 389 DGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDV 448
              QPNVV YN +I S  +   +NEA D++ +M   G  PD VTY  LI      G +  
Sbjct: 206 KLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKGISPDVVTYNALISGFCIVGKMKD 265

Query: 449 AMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIA 508
           A D++ KM    ++P+ +T++++++   K   L+ A  +   M+ QG  P++ TYN ++ 
Sbjct: 266 ATDLFNKMIFENINPNVYTFNILVDGFCKERRLKEAKNVLAMMMKQGIKPDVFTYNSLMD 325

Query: 509 LQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVP 568
                +    A  ++  +   G  P+  +YSI++        +DEA  +F EM   N +P
Sbjct: 326 RYCLVKEVNKAKHIFNTISQRGVNPNIHSYSIMIHGFCKIKKVDEAMNLFKEMHCNNIIP 385

Query: 569 DEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLL 628
           D   Y  L+D   K G +  A +  + M   G+  +  T NS+L A  +  Q+  A  LL
Sbjct: 386 DVVTYNSLIDGLCKLGKISYALKLVDEMHDRGVPHDKITYNSILDALCKNHQVDKAIALL 445

Query: 629 QGMLNLGLKPSLQTYTLLLS-CCTEARSPYDMGFCHELMAVSGH 671
             M + G++P + TYT L+   C   R   D     E + V G+
Sbjct: 446 TKMKDEGIQPDICTYTTLVDGLCKNGRLE-DARIVFEDLLVKGY 488



 Score =  124 bits (311), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 83/296 (28%), Positives = 143/296 (48%), Gaps = 6/296 (2%)

Query: 355 GFKHDEHTYTTMVG---ILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           G   D  TY  ++    I+G+ +       L ++M+ +   PNV T+N L+  + +   L
Sbjct: 242 GISPDVVTYNALISGFCIVGKMKD---ATDLFNKMIFENINPNVYTFNILVDGFCKERRL 298

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
            EA +V   M   G +PD  TY +L+D +     ++ A  ++  +   G++P+  +YS++
Sbjct: 299 KEAKNVLAMMMKQGIKPDVFTYNSLMDRYCLVKEVNKAKHIFNTISQRGVNPNIHSYSIM 358

Query: 472 INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF 531
           I+   K   +  A  LF EM     IP++VTYN +I    K      ALKL  +M + G 
Sbjct: 359 IHGFCKIKKVDEAMNLFKEMHCNNIIPDVVTYNSLIDGLCKLGKISYALKLVDEMHDRGV 418

Query: 532 EPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWE 591
             DK+TY+ +++ L     +D+A A+  +M+ +   PD   Y  LVD   K G +  A  
Sbjct: 419 PHDKITYNSILDALCKNHQVDKAIALLTKMKDEGIQPDICTYTTLVDGLCKNGRLEDARI 478

Query: 592 WYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
            +E +L  G   +V    +++  F   G   ++  LL  M   G  P+  TY +++
Sbjct: 479 VFEDLLVKGYILDVNIYTAMIQGFCSHGLFDESLDLLSKMEENGCIPNAVTYEIII 534



 Score =  123 bits (308), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 79/301 (26%), Positives = 148/301 (49%)

Query: 347 FNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYG 406
           FN L  Q   K     +  ++G L ++  +  +  L  QM  +G   ++V  + LI+ + 
Sbjct: 59  FNRLLHQKNPKPSIFQFGKILGSLVKSNHYSTVVSLHRQMEFNGITSDLVILSILINCFS 118

Query: 407 RANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTF 466
           +      +  V  ++  +G EP+ +T  TLI      G +  A+  + K+ A G   +  
Sbjct: 119 QLGQNPLSFSVLAKILKMGYEPNVITLTTLIKGLCLKGQIHQALQFHDKVVALGFHLNKV 178

Query: 467 TYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDM 526
           +Y  +IN L K G   AA QL   +  +   PN+V YN +I    K +    A  LY +M
Sbjct: 179 SYGTLINGLCKVGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEM 238

Query: 527 QNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNV 586
            + G  PD VTY+ ++      G + +A  +F +M  +N  P+   + +LVD + K   +
Sbjct: 239 VSKGISPDVVTYNALISGFCIVGKMKDATDLFNKMIFENINPNVYTFNILVDGFCKERRL 298

Query: 587 RKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLL 646
           ++A      M++ G++P+V T NSL+  +  V +++ A H+   +   G+ P++ +Y+++
Sbjct: 299 KEAKNVLAMMMKQGIKPDVFTYNSLMDRYCLVKEVNKAKHIFNTISQRGVNPNIHSYSIM 358

Query: 647 L 647
           +
Sbjct: 359 I 359



 Score =  119 bits (299), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 72/276 (26%), Positives = 135/276 (48%)

Query: 361 HTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQ 420
           +T+  +V    + R+      +L  M++ G +P+V TYN L+  Y     +N+A  +F  
Sbjct: 283 YTFNILVDGFCKERRLKEAKNVLAMMMKQGIKPDVFTYNSLMDRYCLVKEVNKAKHIFNT 342

Query: 421 MQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGH 480
           +   G  P+  +Y  +I    K   +D AM+++K+M    + PD  TY+ +I+ L K G 
Sbjct: 343 ISQRGVNPNIHSYSIMIHGFCKIKKVDEAMNLFKEMHCNNIIPDVVTYNSLIDGLCKLGK 402

Query: 481 LQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSI 540
           +  A +L  EM ++G   + +TYN ++    K      A+ L   M++ G +PD  TY+ 
Sbjct: 403 ISYALKLVDEMHDRGVPHDKITYNSILDALCKNHQVDKAIALLTKMKDEGIQPDICTYTT 462

Query: 541 VMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAG 600
           +++ L   G L++A  VF ++  K ++ D  +Y  ++  +   G   ++ +    M + G
Sbjct: 463 LVDGLCKNGRLEDARIVFEDLLVKGYILDVNIYTAMIQGFCSHGLFDESLDLLSKMEENG 522

Query: 601 LRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGL 636
             PN  T   ++ +     +   A  LL+ M+  GL
Sbjct: 523 CIPNAVTYEIIICSLFDKDENDKAEKLLREMITRGL 558



 Score =  115 bits (289), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 89/356 (25%), Positives = 166/356 (46%), Gaps = 6/356 (1%)

Query: 382 LLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHA 441
           +L ++++ G +PNV+T   LI        +++AL    ++  +G   ++V+Y TLI+   
Sbjct: 129 VLAKILKMGYEPNVITLTTLIKGLCLKGQIHQALQFHDKVVALGFHLNKVSYGTLINGLC 188

Query: 442 KAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLV 501
           K G    A+ + +++    + P+   Y+ II+ + K   +  A  L+ EMV++G  P++V
Sbjct: 189 KVGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKGISPDVV 248

Query: 502 TYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCG--YLDEAEAVFA 559
           TYN +I+        + A  L+  M      P+  T++I+++  G C    L EA+ V A
Sbjct: 249 TYNALISGFCIVGKMKDATDLFNKMIFENINPNVYTFNILVD--GFCKERRLKEAKNVLA 306

Query: 560 EMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVG 619
            M ++   PD   Y  L+D +     V KA   +  + Q G+ PN+ + + ++  F ++ 
Sbjct: 307 MMMKQGIKPDVFTYNSLMDRYCLVKEVNKAKHIFNTISQRGVNPNIHSYSIMIHGFCKIK 366

Query: 620 QLSDAYHLLQGMLNLGLKPSLQTY-TLLLSCCTEARSPYDMGFCHELMAVSGHPAHMFLL 678
           ++ +A +L + M    + P + TY +L+   C   +  Y +    E M   G P      
Sbjct: 367 KVDEAMNLFKEMHCNNIIPDVVTYNSLIDGLCKLGKISYALKLVDE-MHDRGVPHDKITY 425

Query: 679 SMPSPGPDGQNVRDHVGSFLEMMHSEDRESKRGLVDAVVDFLHKSGLKEEAGSVWE 734
           +         +  D   + L  M  E  +        +VD L K+G  E+A  V+E
Sbjct: 426 NSILDALCKNHQVDKAIALLTKMKDEGIQPDICTYTTLVDGLCKNGRLEDARIVFE 481



 Score = 91.7 bits (226), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 61/216 (28%), Positives = 107/216 (49%), Gaps = 1/216 (0%)

Query: 346 FFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSY 405
            FN +  Q G   + H+Y+ M+    + ++      L  +M  +   P+VVTYN LI   
Sbjct: 339 IFNTIS-QRGVNPNIHSYSIMIHGFCKIKKVDEAMNLFKEMHCNNIIPDVVTYNSLIDGL 397

Query: 406 GRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDT 465
            +   ++ AL +  +M   G   D++TY +++D   K   +D A+ +  KM+  G+ PD 
Sbjct: 398 CKLGKISYALKLVDEMHDRGVPHDKITYNSILDALCKNHQVDKAIALLTKMKDEGIQPDI 457

Query: 466 FTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRD 525
            TY+ +++ L K G L+ A  +F +++ +G I ++  Y  MI        +  +L L   
Sbjct: 458 CTYTTLVDGLCKNGRLEDARIVFEDLLVKGYILDVNIYTAMIQGFCSHGLFDESLDLLSK 517

Query: 526 MQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEM 561
           M+  G  P+ VTY I++  L      D+AE +  EM
Sbjct: 518 MEENGCIPNAVTYEIIICSLFDKDENDKAEKLLREM 553



 Score = 70.1 bits (170), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 42/141 (29%), Positives = 66/141 (46%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           G  HD+ TY +++  L +  Q      LL +M  +G QP++ TY  L+    +   L +A
Sbjct: 417 GVPHDKITYNSILDALCKNHQVDKAIALLTKMKDEGIQPDICTYTTLVDGLCKNGRLEDA 476

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
             VF+ + V G   D   Y  +I      G  D ++D+  KM+  G  P+  TY +II  
Sbjct: 477 RIVFEDLLVKGYILDVNIYTAMIQGFCSHGLFDESLDLLSKMEENGCIPNAVTYEIIICS 536

Query: 475 LGKAGHLQAAHQLFCEMVNQG 495
           L        A +L  EM+ +G
Sbjct: 537 LFDKDENDKAEKLLREMITRG 557


>gi|255660800|gb|ACU25569.1| pentatricopeptide repeat-containing protein [Verbena rigida]
          Length = 418

 Score =  146 bits (369), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 84/279 (30%), Positives = 153/279 (54%)

Query: 370 LGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPD 429
           L + + F  +    ++ +  G   ++  +N L+HS+ +   +  A  VF  +   G  P 
Sbjct: 111 LMKLKYFKLVWGFYEENLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPS 170

Query: 430 RVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFC 489
            V++ TL++ + K G L+    +   MQA+G+ PD +TYSV+IN L K   +  A+ LF 
Sbjct: 171 VVSFNTLMNGYIKLGDLNEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANVLFD 230

Query: 490 EMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCG 549
           EM+++G +PN VT+  +I    K      A+++Y+ M +    PD +TY+ ++  L   G
Sbjct: 231 EMLDKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKG 290

Query: 550 YLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCN 609
            L +A+ +  EM  K   PD+  Y  L+D   K G++  A+E+ + M++  +R +     
Sbjct: 291 DLKQAQDLIDEMIMKGLKPDKFTYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYT 350

Query: 610 SLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
           +L+S   + G+  DA  +L+ ML++GLKP + TYT++++
Sbjct: 351 ALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIIN 389



 Score =  123 bits (309), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 82/316 (25%), Positives = 154/316 (48%), Gaps = 10/316 (3%)

Query: 335 KQLQDHTVALGFFNWL------RRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVR 388
           +++ +H + L +F  +        + G+    + +  ++    +  +      + D + +
Sbjct: 105 RKVLEHLMKLKYFKLVWGFYEENLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITK 164

Query: 389 DGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDV 448
            G +P+VV++N L++ Y +   LNE   +   MQ  G +PD  TY  LI+   K   +D 
Sbjct: 165 WGLRPSVVSFNTLMNGYIKLGDLNEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDD 224

Query: 449 AMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIA 508
           A  ++ +M   GL P+  T++ +I+   K G +  A +++ +M++Q   P+L+TYN +I 
Sbjct: 225 ANVLFDEMLDKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIY 284

Query: 509 LQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHC--GYLDEAEAVFAEMRRKNW 566
              K  + + A  L  +M   G +PDK TY+ +++  G+C  G L+ A      M ++N 
Sbjct: 285 GLCKKGDLKQAQDLIDEMIMKGLKPDKFTYTTLID--GNCKEGDLETAFEYRKRMIKENI 342

Query: 567 VPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYH 626
             D+  Y  L+    + G    A +    ML  GL+P + T   +++ F + G +     
Sbjct: 343 RLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWXGSK 402

Query: 627 LLQGMLNLGLKPSLQT 642
           LL+ M   G KPS+ T
Sbjct: 403 LLKEMQRDGYKPSVVT 418


>gi|15225031|ref|NP_178657.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|42570711|ref|NP_973429.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75216767|sp|Q9ZUE9.1|PP149_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g06000
 gi|4006835|gb|AAC95177.1| hypothetical protein [Arabidopsis thaliana]
 gi|110736272|dbj|BAF00106.1| hypothetical protein [Arabidopsis thaliana]
 gi|330250896|gb|AEC05990.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|330250897|gb|AEC05991.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 536

 Score =  146 bits (369), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 105/405 (25%), Positives = 196/405 (48%), Gaps = 23/405 (5%)

Query: 253 KSNLQPSDAKVVECVSERFSKPSREMKIPAGLAPFSRHFASTGNVVESVSRILRQWK--W 310
           K+ L     ++ EC+      P+  +     L      FA  G +  + + +L+ ++   
Sbjct: 115 KAGLHDLAGQMFECMKSDGVSPNNRL-----LGFLVSSFAEKGKLHFATALLLQSFEVEG 169

Query: 311 GPLAEEALGNTNYSMDAYQANQVLKQLQDHTVALGFFNWLRRQAGFKHDEHTYTTMV-GI 369
             +   +L NT   +D  +    +K   +H         LR Q+   +D  T+  ++ G+
Sbjct: 170 CCMVVNSLLNTLVKLD--RVEDAMKLFDEH---------LRFQSC--NDTKTFNILIRGL 216

Query: 370 LGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVG-CEP 428
            G  +   A+ +LL  M   GC+P++VTYN LI  + ++N LN+A ++FK ++    C P
Sbjct: 217 CGVGKAEKAL-ELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSP 275

Query: 429 DRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLF 488
           D VTY ++I  + KAG +  A  +   M   G+ P   T++V+++   KAG +  A ++ 
Sbjct: 276 DVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIR 335

Query: 489 CEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHC 548
            +M++ GC P++VT+  +I    +        +L+ +M   G  P+  TYSI++  L + 
Sbjct: 336 GKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNE 395

Query: 549 GYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTC 608
             L +A  +  ++  K+ +P   +Y  ++D + KAG V +A    E M +   +P+  T 
Sbjct: 396 NRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITF 455

Query: 609 NSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEA 653
             L+      G++ +A  +   M+ +G  P   T + LLSC  +A
Sbjct: 456 TILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLSCLLKA 500



 Score =  126 bits (317), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 79/277 (28%), Positives = 135/277 (48%), Gaps = 3/277 (1%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDG--CQPNVVTYNRLIHSYGRANYLN 412
           G + D  TY T++    ++ +    +++    V+ G  C P+VVTY  +I  Y +A  + 
Sbjct: 236 GCEPDIVTYNTLIQGFCKSNELNKASEMFKD-VKSGSVCSPDVVTYTSMISGYCKAGKMR 294

Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
           EA  +   M  +G  P  VT+  L+D +AKAG +  A ++  KM + G  PD  T++ +I
Sbjct: 295 EASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLI 354

Query: 473 NCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFE 532
           +   + G +    +L+ EM  +G  PN  TY+I+I           A +L   + +    
Sbjct: 355 DGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDII 414

Query: 533 PDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEW 592
           P    Y+ V++     G ++EA  +  EM +K   PD+  + +L+      G + +A   
Sbjct: 415 PQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSI 474

Query: 593 YEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQ 629
           +  M+  G  P+  T +SLLS  L+ G   +AYHL Q
Sbjct: 475 FHKMVAIGCSPDKITVSSLLSCLLKAGMAKEAYHLNQ 511



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 90/337 (26%), Positives = 166/337 (49%), Gaps = 11/337 (3%)

Query: 324 SMDAYQANQVLKQLQDHT-VALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKL 382
           +++ + + +V+K+L ++  +   F+ + R +   +H   TY  +   L +A       ++
Sbjct: 66  NLNPFISFEVVKKLDNNPHIGFRFWEFSRFKLNIRHSFWTYNLLTRSLCKAGLHDLAGQM 125

Query: 383 LDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQ-MQVVGCEPDRVTYCTLIDIHA 441
            + M  DG  PN      L+ S+     L+ A  +  Q  +V GC    +   +L++   
Sbjct: 126 FECMKSDGVSPNNRLLGFLVSSFAEKGKLHFATALLLQSFEVEGC---CMVVNSLLNTLV 182

Query: 442 KAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLV 501
           K   ++ AM ++ +        DT T++++I  L   G  + A +L   M   GC P++V
Sbjct: 183 KLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKAEKALELLGVMSGFGCEPDIV 242

Query: 502 TYNIMIALQAKARNYQSALKLYRDMQNAGF-EPDKVTYSIVMEVLGHC--GYLDEAEAVF 558
           TYN +I    K+     A ++++D+++     PD VTY+ ++   G+C  G + EA ++ 
Sbjct: 243 TYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMIS--GYCKAGKMREASSLL 300

Query: 559 AEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRV 618
            +M R    P    + +LVD + KAG +  A E    M+  G  P+V T  SL+  + RV
Sbjct: 301 DDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRV 360

Query: 619 GQLSDAYHLLQGMLNLGLKPSLQTYTLLL-SCCTEAR 654
           GQ+S  + L + M   G+ P+  TY++L+ + C E R
Sbjct: 361 GQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENR 397



 Score =  117 bits (293), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 81/304 (26%), Positives = 150/304 (49%), Gaps = 2/304 (0%)

Query: 381 KLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIH 440
           KL D+ +R     +  T+N LI          +AL++   M   GCEPD VTY TLI   
Sbjct: 192 KLFDEHLRFQSCNDTKTFNILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGF 251

Query: 441 AKAGFLDVAMDMYKKMQAAGL-SPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPN 499
            K+  L+ A +M+K +++  + SPD  TY+ +I+   KAG ++ A  L  +M+  G  P 
Sbjct: 252 CKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPT 311

Query: 500 LVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFA 559
            VT+N+++   AKA    +A ++   M + G  PD VT++ +++     G + +   ++ 
Sbjct: 312 NVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWE 371

Query: 560 EMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVG 619
           EM  +   P+   Y +L++       + KA E    +    + P     N ++  F + G
Sbjct: 372 EMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAG 431

Query: 620 QLSDAYHLLQGMLNLGLKPSLQTYT-LLLSCCTEARSPYDMGFCHELMAVSGHPAHMFLL 678
           ++++A  +++ M     KP   T+T L++  C + R    +   H+++A+   P  + + 
Sbjct: 432 KVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVS 491

Query: 679 SMPS 682
           S+ S
Sbjct: 492 SLLS 495


>gi|359485815|ref|XP_003633341.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Vitis vinifera]
          Length = 822

 Score =  146 bits (369), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 97/328 (29%), Positives = 159/328 (48%), Gaps = 2/328 (0%)

Query: 323 YSMDAYQANQVLKQLQDHTVALGFFNWLRR--QAGFKHDEHTYTTMVGILGRARQFGAIN 380
           +    Y  N +L QL    +  G  N  ++   +G +    T+ T++ IL +  +     
Sbjct: 159 FGFSLYSCNTLLIQLAKFEMVEGARNLYKQMLNSGIQPSLLTFNTLINILSKKGKVREAE 218

Query: 381 KLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIH 440
            +L Q+ +    P+V TY  LI  + R   L+ A  VF +M   GC+P+ VTY TLI+  
Sbjct: 219 LILSQIFQYDLSPDVFTYTSLILGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGL 278

Query: 441 AKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNL 500
              G +D A+DM ++M   G+ P  +TY++ I  L    H + A +L   M  +GC PN+
Sbjct: 279 CNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNV 338

Query: 501 VTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAE 560
            TY  +I+  ++    + A+ LY  M   G  P+ VTY+ ++  L   G    A  +F  
Sbjct: 339 QTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHW 398

Query: 561 MRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQ 620
           M     + +   Y  ++      G++ KA   +E ML+ G  P V T N+L++ +L  G 
Sbjct: 399 MEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGN 458

Query: 621 LSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
           +++A  LL  M   G +P   TY  L+S
Sbjct: 459 VNNAARLLDLMKENGCEPDEWTYNELVS 486



 Score =  142 bits (357), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 89/295 (30%), Positives = 151/295 (51%)

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
           Q     D  TYT+++    R R       + D+MV++GC PN VTY+ LI+       ++
Sbjct: 226 QYDLSPDVFTYTSLILGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVD 285

Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
           EALD+ ++M   G EP   TY   I         + A+++  +M+  G  P+  TY+ +I
Sbjct: 286 EALDMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALI 345

Query: 473 NCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFE 532
           + L + G L+ A  L+ +M+ +G +PN VTYN +I        + +ALK++  M+  G  
Sbjct: 346 SGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSL 405

Query: 533 PDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEW 592
            +  TY+ +++ L   G +++A  +F +M +   +P    Y  L++ +   GNV  A   
Sbjct: 406 ANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARL 465

Query: 593 YEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
            + M + G  P+  T N L+S F + G+L  A    Q M+  GL P+  +YT L+
Sbjct: 466 LDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTALI 520



 Score =  135 bits (341), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 92/314 (29%), Positives = 149/314 (47%), Gaps = 1/314 (0%)

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
           + G +   +TYT  +  L          +L+ +M + GC+PNV TY  LI    R   L 
Sbjct: 296 EKGIEPTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLE 355

Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
            A+ ++ +M   G  P+ VTY  LI+     G    A+ ++  M+  G   +T TY+ II
Sbjct: 356 VAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEII 415

Query: 473 NCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFE 532
             L   G ++ A  LF +M+  G +P +VTYN +I       N  +A +L   M+  G E
Sbjct: 416 KGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCE 475

Query: 533 PDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEW 592
           PD+ TY+ ++      G L+ A   F EM      P+   Y  L+D   K G V  A   
Sbjct: 476 PDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTALIDGHSKDGKVDIALSL 535

Query: 593 YEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS-CCT 651
            + M + G  PNV + N++++   +  + S+A  +   M+  GL P++ TYT L+   C 
Sbjct: 536 LKRMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMVEQGLLPNVITYTTLIDGLCR 595

Query: 652 EARSPYDMGFCHEL 665
             R+ +     H++
Sbjct: 596 NGRTQFAFKIFHDM 609



 Score =  132 bits (331), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 86/306 (28%), Positives = 145/306 (47%), Gaps = 39/306 (12%)

Query: 362 TYTTMV-GILGRARQFGAIN---KLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDV 417
           TY T++ G L +    G +N   +LLD M  +GC+P+  TYN L+  + +   L  A   
Sbjct: 445 TYNTLINGYLTK----GNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFY 500

Query: 418 FKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGK 477
           F++M   G  P+ V+Y  LID H+K G +D+A+ + K+M+  G +P+  +Y+ +IN L K
Sbjct: 501 FQEMVECGLNPNPVSYTALIDGHSKDGKVDIALSLLKRMEEMGCNPNVESYNAVINGLSK 560

Query: 478 AGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQ---------- 527
                 A ++  +MV QG +PN++TY  +I    +    Q A K++ DM+          
Sbjct: 561 ENRFSEAEKICDKMVEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYT 620

Query: 528 ---------------------NAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNW 566
                                  G EP   TYS ++  L   G   EAE +  +M+ + +
Sbjct: 621 YSSLIYGLCQEGKADEAERMSEIGCEPTLDTYSTLVSGLCRKGRFYEAEQLVKDMKERGF 680

Query: 567 VPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYH 626
            PD  +Y  L+    K   V  A + + ++   G + ++    +L+ A  + GQ+ +A  
Sbjct: 681 CPDREIYYSLLIAHCKNLEVDHALKIFHSIEAKGFQLHLSIYRALICALCKAGQVEEAQA 740

Query: 627 LLQGML 632
           L   ML
Sbjct: 741 LFDNML 746



 Score =  129 bits (323), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 133/559 (23%), Positives = 235/559 (42%), Gaps = 46/559 (8%)

Query: 272 SKP--SREMKIPAGLAPFSRHFASTGNVVESVSRILRQWKWGPLAEEALGNTNYSMDAYQ 329
           SKP  S    +PA   PF         +V  V  IL + +W   +E  L   +  + A+ 
Sbjct: 27  SKPHISSHFAVPASREPFQA-------IVSRVCAILSRVQWKGSSE--LKQLSPQLKAHH 77

Query: 330 ANQVLKQLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRD 389
             +++   +D    + FF W+ ++  +KH+ + + +M+  L R R F   + +   M++ 
Sbjct: 78  VAEIVAVHKDTESVIQFFYWISKRPFYKHNMNCFISMLNRLVRDRVFAPADHIRILMIKA 137

Query: 390 --------------------GCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPD 429
                               G   ++ + N L+    +   +  A +++KQM   G +P 
Sbjct: 138 CRNEEEIRRVADFLNEISGMGFGFSLYSCNTLLIQLAKFEMVEGARNLYKQMLNSGIQPS 197

Query: 430 RVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFC 489
            +T+ TLI+I +K G +  A  +  ++    LSPD FTY+ +I    +  +L  A  +F 
Sbjct: 198 LLTFNTLINILSKKGKVREAELILSQIFQYDLSPDVFTYTSLILGHCRNRNLDLAFGVFD 257

Query: 490 EMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCG 549
            MV +GC PN VTY+ +I           AL +  +M   G EP   TY++ +  L    
Sbjct: 258 RMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITALCAIE 317

Query: 550 YLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCN 609
           + +EA  + A M+++   P+   Y  L+    + G +  A   Y  ML+ GL PN  T N
Sbjct: 318 HEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYN 377

Query: 610 SLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYT-LLLSCCTEARSPYDMGFCHELMAV 668
           +L++     G+ S A  +   M   G   + QTY  ++   C        M    +++ +
Sbjct: 378 ALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKM 437

Query: 669 SGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRESKRGLVDAVVDFLHKSGLKEE 728
              P  +   ++ +      NV ++    L++M     E      + +V    K G  E 
Sbjct: 438 GPLPTVVTYNTLINGYLTKGNV-NNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLES 496

Query: 729 AGSVWEVAAQKNVYPDAVKEKGMSYWLINLHVMSDGTAVIALSRTLAWFRKQMLISGVGP 788
           A   ++   +  + P+ V        LI+ H   DG   IALS       K+M   G  P
Sbjct: 497 ASFYFQEMVECGLNPNPVSYTA----LIDGHS-KDGKVDIALS-----LLKRMEEMGCNP 546

Query: 789 ---SRIDIVTGWGRRSRVT 804
              S   ++ G  + +R +
Sbjct: 547 NVESYNAVINGLSKENRFS 565



 Score =  122 bits (306), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 89/331 (26%), Positives = 150/331 (45%), Gaps = 37/331 (11%)

Query: 350 LRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRAN 409
           L ++ G + DE TY  +V    +  +  + +    +MV  G  PN V+Y  LI  + +  
Sbjct: 468 LMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTALIDGHSKDG 527

Query: 410 YLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYS 469
            ++ AL + K+M+ +GC P+  +Y  +I+  +K      A  +  KM   GL P+  TY+
Sbjct: 528 KVDIALSLLKRMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMVEQGLLPNVITYT 587

Query: 470 VIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMI---------------------- 507
            +I+ L + G  Q A ++F +M  + C+PNL TY+ +I                      
Sbjct: 588 TLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKADEAERMSEIGCEP 647

Query: 508 ----------ALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYL--DEAE 555
                      L  K R Y+ A +L +DM+  GF PD+  Y  ++  + HC  L  D A 
Sbjct: 648 TLDTYSTLVSGLCRKGRFYE-AEQLVKDMKERGFCPDREIYYSLL--IAHCKNLEVDHAL 704

Query: 556 AVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAF 615
            +F  +  K +     +Y  L+    KAG V +A   ++ ML+     +      L+   
Sbjct: 705 KIFHSIEAKGFQLHLSIYRALICALCKAGQVEEAQALFDNMLEKEWNADEIVWTVLVDGL 764

Query: 616 LRVGQLSDAYHLLQGMLNLGLKPSLQTYTLL 646
           L+ G+L     LL  M +    P++QTY +L
Sbjct: 765 LKEGELDLCMKLLHIMESKNFTPNIQTYVIL 795



 Score =  122 bits (306), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 108/439 (24%), Positives = 195/439 (44%), Gaps = 17/439 (3%)

Query: 334 LKQLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQP 393
           L +L    VA+G ++ + ++ G   +  TY  ++  L    +F    K+   M   G   
Sbjct: 348 LSRLGKLEVAIGLYHKMLKE-GLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLA 406

Query: 394 NVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMY 453
           N  TYN +I        + +A+ +F++M  +G  P  VTY TLI+ +   G ++ A  + 
Sbjct: 407 NTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLL 466

Query: 454 KKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKA 513
             M+  G  PD +TY+ +++   K G L++A   F EMV  G  PN V+Y  +I   +K 
Sbjct: 467 DLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTALIDGHSKD 526

Query: 514 RNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVY 573
                AL L + M+  G  P+  +Y+ V+  L       EAE +  +M  +  +P+   Y
Sbjct: 527 GKVDIALSLLKRMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMVEQGLLPNVITY 586

Query: 574 GLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLN 633
             L+D   + G  + A++ +  M +    PN+ T +SL+    + G+  +A    + M  
Sbjct: 587 TTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKADEA----ERMSE 642

Query: 634 LGLKPSLQTYTLLLS-CCTEARSPYDMGFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRD 692
           +G +P+L TY+ L+S  C + R         ++      P      S+         V D
Sbjct: 643 IGCEPTLDTYSTLVSGLCRKGRFYEAEQLVKDMKERGFCPDREIYYSLLIAHCKNLEV-D 701

Query: 693 HVGSFLEMMHSEDRESKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAV------ 746
           H       + ++  +    +  A++  L K+G  EEA ++++   +K    D +      
Sbjct: 702 HALKIFHSIEAKGFQLHLSIYRALICALCKAGQVEEAQALFDNMLEKEWNADEIVWTVLV 761

Query: 747 ----KEKGMSYWLINLHVM 761
               KE  +   +  LH+M
Sbjct: 762 DGLLKEGELDLCMKLLHIM 780



 Score =  119 bits (298), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 81/305 (26%), Positives = 145/305 (47%), Gaps = 1/305 (0%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           ++ G + +  TYT ++  L R  +      L  +M+++G  PN VTYN LI+        
Sbjct: 330 KKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRF 389

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
           + AL +F  M+  G   +  TY  +I      G ++ AM +++KM   G  P   TY+ +
Sbjct: 390 STALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTL 449

Query: 472 INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF 531
           IN     G++  A +L   M   GC P+  TYN +++  +K    +SA   +++M   G 
Sbjct: 450 INGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGL 509

Query: 532 EPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWE 591
            P+ V+Y+ +++     G +D A ++   M      P+   Y  +++   K     +A +
Sbjct: 510 NPNPVSYTALIDGHSKDGKVDIALSLLKRMEEMGCNPNVESYNAVINGLSKENRFSEAEK 569

Query: 592 WYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTY-TLLLSCC 650
             + M++ GL PNV T  +L+    R G+   A+ +   M      P+L TY +L+   C
Sbjct: 570 ICDKMVEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLC 629

Query: 651 TEARS 655
            E ++
Sbjct: 630 QEGKA 634



 Score =  115 bits (287), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 75/269 (27%), Positives = 119/269 (44%), Gaps = 4/269 (1%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
            + G   +  +Y  ++  L +  +F    K+ D+MV  G  PNV+TY  LI    R    
Sbjct: 540 EEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMVEQGLLPNVITYTTLIDGLCRNGRT 599

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
             A  +F  M+   C P+  TY +LI    + G  D A    ++M   G  P   TYS +
Sbjct: 600 QFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKADEA----ERMSEIGCEPTLDTYSTL 655

Query: 472 INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF 531
           ++ L + G    A QL  +M  +G  P+   Y  ++    K      ALK++  ++  GF
Sbjct: 656 VSGLCRKGRFYEAEQLVKDMKERGFCPDREIYYSLLIAHCKNLEVDHALKIFHSIEAKGF 715

Query: 532 EPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWE 591
           +     Y  ++  L   G ++EA+A+F  M  K W  DE V+ +LVD   K G +    +
Sbjct: 716 QLHLSIYRALICALCKAGQVEEAQALFDNMLEKEWNADEIVWTVLVDGLLKEGELDLCMK 775

Query: 592 WYEAMLQAGLRPNVPTCNSLLSAFLRVGQ 620
               M      PN+ T   L     R+G+
Sbjct: 776 LLHIMESKNFTPNIQTYVILGRELSRIGK 804



 Score = 74.3 bits (181), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 47/179 (26%), Positives = 84/179 (46%)

Query: 384 DQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKA 443
           ++M   GC+P + TY+ L+    R     EA  + K M+  G  PDR  Y +L+  H K 
Sbjct: 638 ERMSEIGCEPTLDTYSTLVSGLCRKGRFYEAEQLVKDMKERGFCPDREIYYSLLIAHCKN 697

Query: 444 GFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTY 503
             +D A+ ++  ++A G       Y  +I  L KAG ++ A  LF  M+ +    + + +
Sbjct: 698 LEVDHALKIFHSIEAKGFQLHLSIYRALICALCKAGQVEEAQALFDNMLEKEWNADEIVW 757

Query: 504 NIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMR 562
            +++    K       +KL   M++  F P+  TY I+   L   G   E+E +  +++
Sbjct: 758 TVLVDGLLKEGELDLCMKLLHIMESKNFTPNIQTYVILGRELSRIGKSIESEPLADKLK 816


>gi|255660792|gb|ACU25565.1| pentatricopeptide repeat-containing protein [Verbena bonariensis]
          Length = 418

 Score =  146 bits (369), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 84/279 (30%), Positives = 153/279 (54%)

Query: 370 LGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPD 429
           L + + F  +    ++ +  G   ++  +N L+HS+ +   +  A  VF  +   G  P 
Sbjct: 111 LMKLKYFKLVWGFYEENLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPS 170

Query: 430 RVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFC 489
            V++ TL++ + K G L+    +   MQA+G+ PD +TYSV+IN L K   +  A+ LF 
Sbjct: 171 VVSFNTLMNGYIKLGDLNEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANVLFD 230

Query: 490 EMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCG 549
           EM+++G +PN VT+  +I    K      A+++Y+ M +    PD +TY+ ++  L   G
Sbjct: 231 EMLDKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKG 290

Query: 550 YLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCN 609
            L +A+ +  EM  K   PD+  Y  L+D   K G++  A+E+ + M++  +R +     
Sbjct: 291 DLKQAQDLIDEMIMKGLKPDKFTYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYT 350

Query: 610 SLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
           +L+S   + G+  DA  +L+ ML++GLKP + TYT++++
Sbjct: 351 ALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIIN 389



 Score =  124 bits (310), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 82/316 (25%), Positives = 154/316 (48%), Gaps = 10/316 (3%)

Query: 335 KQLQDHTVALGFFNWL------RRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVR 388
           +++ +H + L +F  +        + G+    + +  ++    +  +      + D + +
Sbjct: 105 RKVLEHLMKLKYFKLVWGFYEENLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITK 164

Query: 389 DGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDV 448
            G +P+VV++N L++ Y +   LNE   +   MQ  G +PD  TY  LI+   K   +D 
Sbjct: 165 WGLRPSVVSFNTLMNGYIKLGDLNEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDD 224

Query: 449 AMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIA 508
           A  ++ +M   GL P+  T++ +I+   K G +  A +++ +M++Q   P+L+TYN +I 
Sbjct: 225 ANVLFDEMLDKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIY 284

Query: 509 LQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHC--GYLDEAEAVFAEMRRKNW 566
              K  + + A  L  +M   G +PDK TY+ +++  G+C  G L+ A      M ++N 
Sbjct: 285 GLCKKGDLKQAQDLIDEMIMKGLKPDKFTYTTLID--GNCKEGDLETAFEYRKRMIKENI 342

Query: 567 VPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYH 626
             D+  Y  L+    + G    A +    ML  GL+P + T   +++ F + G +     
Sbjct: 343 RLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSK 402

Query: 627 LLQGMLNLGLKPSLQT 642
           LL+ M   G KPS+ T
Sbjct: 403 LLKEMQRDGYKPSVVT 418


>gi|410109897|gb|AFV61028.1| pentatricopeptide repeat-containing protein 11, partial [Lantana
           macropoda]
          Length = 412

 Score =  146 bits (369), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 85/279 (30%), Positives = 150/279 (53%)

Query: 370 LGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPD 429
           L + + F  +    ++++  G   ++  +N L+H + +   +  A  VF  +   G  P 
Sbjct: 98  LMKLKYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPS 157

Query: 430 RVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFC 489
            V+Y TL++ + + G LD    +   M A+G+ PD +TYSV+IN L K   +  A++LF 
Sbjct: 158 VVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFD 217

Query: 490 EMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCG 549
           EM+ +G +PN VT+  +I    K      A+++Y+ M +    PD +TY+ ++  L   G
Sbjct: 218 EMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKG 277

Query: 550 YLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCN 609
            L +A  +  EM  K   PD+  Y  L+D   K G++  A+E  + M+Q  +R +     
Sbjct: 278 DLKQAHHLIDEMSMKELKPDKITYTTLIDGCCKEGDLDSAFEHRKRMIQENIRLDEVAYT 337

Query: 610 SLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
           +L+S   + G+  DA  +L+ MLN+GLKP  +TYT++++
Sbjct: 338 ALISGLCQEGRSVDAEKMLREMLNVGLKPDSRTYTMIIN 376



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 99/329 (30%), Positives = 164/329 (49%), Gaps = 9/329 (2%)

Query: 291 FASTGNVVESVSRILRQWK--WGPLAEEALGNTNYSMDAYQANQVLKQL---QDHTVALG 345
           F +   V+E + + L+ +K  WG   EE L    Y    Y  N ++ +     D  VA  
Sbjct: 88  FDTCRKVLEHLMK-LKYFKLVWG-FYEEIL-ECGYPASLYFFNILMHRFCKDGDIRVAQS 144

Query: 346 FFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSY 405
            F+ + +  G +    +Y T++    R        +L   M+  G QP+V TY+ LI+  
Sbjct: 145 VFDAITKW-GLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGL 203

Query: 406 GRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDT 465
            + + +++A ++F +M V G  P+ VT+ TLID H K G +D+AM++YK+M +  LSPD 
Sbjct: 204 CKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDL 263

Query: 466 FTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRD 525
            TY+ +I  L K G L+ AH L  EM  +   P+ +TY  +I    K  +  SA +  + 
Sbjct: 264 ITYNTLIYGLCKKGDLKQAHHLIDEMSMKELKPDKITYTTLIDGCCKEGDLDSAFEHRKR 323

Query: 526 MQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGN 585
           M       D+V Y+ ++  L   G   +AE +  EM      PD   Y ++++ + K G+
Sbjct: 324 MIQENIRLDEVAYTALISGLCQEGRSVDAEKMLREMLNVGLKPDSRTYTMIINEFCKKGD 383

Query: 586 VRKAWEWYEAMLQAGLRPNVPTCNSLLSA 614
           V K  +  + M + G  P+V T N L++ 
Sbjct: 384 VWKGSKLLKEMQRDGHVPSVVTYNVLMNG 412



 Score =  124 bits (310), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 83/315 (26%), Positives = 153/315 (48%), Gaps = 1/315 (0%)

Query: 334 LKQLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQP 393
           L +L+   +  GF+  +  + G+    + +  ++    +         + D + + G +P
Sbjct: 98  LMKLKYFKLVWGFYEEIL-ECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRP 156

Query: 394 NVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMY 453
           +VV+YN L++ Y R   L+E   +   M   G +PD  TY  LI+   K   +D A +++
Sbjct: 157 SVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELF 216

Query: 454 KKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKA 513
            +M   GL P+  T++ +I+   K G +  A +++ +M++Q   P+L+TYN +I    K 
Sbjct: 217 DEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKK 276

Query: 514 RNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVY 573
            + + A  L  +M     +PDK+TY+ +++     G LD A      M ++N   DE  Y
Sbjct: 277 GDLKQAHHLIDEMSMKELKPDKITYTTLIDGCCKEGDLDSAFEHRKRMIQENIRLDEVAY 336

Query: 574 GLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLN 633
             L+    + G    A +    ML  GL+P+  T   +++ F + G +     LL+ M  
Sbjct: 337 TALISGLCQEGRSVDAEKMLREMLNVGLKPDSRTYTMIINEFCKKGDVWKGSKLLKEMQR 396

Query: 634 LGLKPSLQTYTLLLS 648
            G  PS+ TY +L++
Sbjct: 397 DGHVPSVVTYNVLMN 411



 Score =  103 bits (256), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 66/263 (25%), Positives = 127/263 (48%), Gaps = 1/263 (0%)

Query: 392 QPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMD 451
           + ++  ++ LI +Y  + +L +A++ ++  +         T   +++   K  +  +   
Sbjct: 50  RSDLYVFSGLITAYLESGFLRDAIECYRLTREHKFWVPFDTCRKVLEHLMKLKYFKLVWG 109

Query: 452 MYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQA 511
            Y+++   G     + ++++++   K G ++ A  +F  +   G  P++V+YN ++    
Sbjct: 110 FYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYI 169

Query: 512 KARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEP 571
           +  +     +L   M  +G +PD  TYS+++  L     +D+A  +F EM  K  VP+  
Sbjct: 170 RLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGV 229

Query: 572 VYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGM 631
            +  L+D   K G V  A E Y+ ML   L P++ T N+L+    + G L  A+HL+  M
Sbjct: 230 TFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEM 289

Query: 632 LNLGLKPSLQTYTLLLS-CCTEA 653
               LKP   TYT L+  CC E 
Sbjct: 290 SMKELKPDKITYTTLIDGCCKEG 312



 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 38/157 (24%), Positives = 81/157 (51%), Gaps = 1/157 (0%)

Query: 499 NLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVF 558
           +L  ++ +I    ++   + A++ YR  +   F     T   V+E L    Y       +
Sbjct: 52  DLYVFSGLITAYLESGFLRDAIECYRLTREHKFWVPFDTCRKVLEHLMKLKYFKLVWGFY 111

Query: 559 AEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRV 618
            E+    +      + +L+  + K G++R A   ++A+ + GLRP+V + N+L++ ++R+
Sbjct: 112 EEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRL 171

Query: 619 GQLSDAYHLLQGMLNLGLKPSLQTYTLLLS-CCTEAR 654
           G L + + L   ML  G++P + TY++L++  C E++
Sbjct: 172 GDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESK 208


>gi|410109867|gb|AFV61013.1| pentatricopeptide repeat-containing protein 11, partial
           [Acantholippia salsoloides]
          Length = 410

 Score =  146 bits (369), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 83/279 (29%), Positives = 150/279 (53%)

Query: 370 LGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPD 429
           L + + F  +     +++  G   ++  +N L+H + +   +  A  VF  +   G  P 
Sbjct: 103 LMKLKYFKLVWGFYKEILECGYPASLYFFNILMHRFCKEGEIRVARSVFDAITKWGLRPS 162

Query: 430 RVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFC 489
            V++ TL++ + + G LD    +   M A+G+ PD +TYSV+IN L K   +  A++LF 
Sbjct: 163 VVSFNTLMNGYIRLGDLDEGFRLKSAMHASGVEPDVYTYSVLINGLCKESKIDGANELFD 222

Query: 490 EMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCG 549
           EM+++G +PN VT+  +I    K      A+++Y+ M +     D +TY+ ++  L   G
Sbjct: 223 EMLDKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSADLITYNTLIYGLCKKG 282

Query: 550 YLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCN 609
            L +A+ +  EMR K   PD+  Y  L+D   K G++  A+E  + M+Q  +R +     
Sbjct: 283 DLKQAQNLIDEMRMKGLKPDKITYTTLIDGCCKEGDLETAFEHRKRMIQENIRLDDVVYT 342

Query: 610 SLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
           +L+S   + G+  DA  +L+ ML++GLKP   TYT++++
Sbjct: 343 TLISGLCQEGRSVDAEKMLREMLSVGLKPDTGTYTMIIN 381



 Score =  120 bits (300), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 80/309 (25%), Positives = 151/309 (48%), Gaps = 1/309 (0%)

Query: 334 LKQLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQP 393
           L +L+   +  GF+  +  + G+    + +  ++    +  +      + D + + G +P
Sbjct: 103 LMKLKYFKLVWGFYKEIL-ECGYPASLYFFNILMHRFCKEGEIRVARSVFDAITKWGLRP 161

Query: 394 NVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMY 453
           +VV++N L++ Y R   L+E   +   M   G EPD  TY  LI+   K   +D A +++
Sbjct: 162 SVVSFNTLMNGYIRLGDLDEGFRLKSAMHASGVEPDVYTYSVLINGLCKESKIDGANELF 221

Query: 454 KKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKA 513
            +M   GL P+  T++ +I+   K G +  A +++ +M++Q    +L+TYN +I    K 
Sbjct: 222 DEMLDKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSADLITYNTLIYGLCKK 281

Query: 514 RNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVY 573
            + + A  L  +M+  G +PDK+TY+ +++     G L+ A      M ++N   D+ VY
Sbjct: 282 GDLKQAQNLIDEMRMKGLKPDKITYTTLIDGCCKEGDLETAFEHRKRMIQENIRLDDVVY 341

Query: 574 GLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLN 633
             L+    + G    A +    ML  GL+P+  T   +++ F + G +     LL+ M  
Sbjct: 342 TTLISGLCQEGRSVDAEKMLREMLSVGLKPDTGTYTMIINEFCKKGDVWTGSKLLKEMQR 401

Query: 634 LGLKPSLQT 642
            G  PS+ T
Sbjct: 402 DGHVPSVVT 410



 Score =  103 bits (257), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 76/317 (23%), Positives = 142/317 (44%), Gaps = 19/317 (5%)

Query: 356 FKHDEHTYTTMVGILGRARQFGAINKLLDQMV-RDG-----------------CQPNVVT 397
           F+H  ++Y TM+  L   +       L+  +V R G                  + ++  
Sbjct: 1   FRHTLYSYCTMIHFLCTHQMLPEAKSLIQVVVSRKGKGSASAVFAAILETKGTLRSDIYV 60

Query: 398 YNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQ 457
           ++ LI +Y  + +L +A++ ++  +         T   +++   K  +  +    YK++ 
Sbjct: 61  FSGLITAYLESGFLRDAIECYRLTREHKFWVPFDTCKKVLEHLMKLKYFKLVWGFYKEIL 120

Query: 458 AAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQ 517
             G     + ++++++   K G ++ A  +F  +   G  P++V++N ++    +  +  
Sbjct: 121 ECGYPASLYFFNILMHRFCKEGEIRVARSVFDAITKWGLRPSVVSFNTLMNGYIRLGDLD 180

Query: 518 SALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLV 577
              +L   M  +G EPD  TYS+++  L     +D A  +F EM  K  VP+   +  L+
Sbjct: 181 EGFRLKSAMHASGVEPDVYTYSVLINGLCKESKIDGANELFDEMLDKGLVPNGVTFTTLI 240

Query: 578 DLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLK 637
           D   K G V  A E Y+ ML   L  ++ T N+L+    + G L  A +L+  M   GLK
Sbjct: 241 DGHCKNGRVDLAMEIYKQMLSQSLSADLITYNTLIYGLCKKGDLKQAQNLIDEMRMKGLK 300

Query: 638 PSLQTYTLLLS-CCTEA 653
           P   TYT L+  CC E 
Sbjct: 301 PDKITYTTLIDGCCKEG 317


>gi|302826103|ref|XP_002994591.1| hypothetical protein SELMODRAFT_138844 [Selaginella moellendorffii]
 gi|300137362|gb|EFJ04342.1| hypothetical protein SELMODRAFT_138844 [Selaginella moellendorffii]
          Length = 599

 Score =  146 bits (369), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 105/389 (26%), Positives = 181/389 (46%), Gaps = 13/389 (3%)

Query: 265 ECVSERFSKPSREMKIPAGLA--PFSRHFASTGNVVESVSRILRQWKWGPLAEEAL-GNT 321
           E     F K   E  +P G+      + +   GN+ E+V  +L Q     + EE   GN 
Sbjct: 104 EAAEHWFEKFKAENLVPGGIVYNSIVQAYCQAGNM-ETVEALLAQ-----MEEEGFQGNL 157

Query: 322 NYSMDAYQANQVLKQLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINK 381
                         +++D    L FF+ L+   G      TY  +V +  +A        
Sbjct: 158 GLYTTVLNG---FAEIRDEEKCLSFFHRLK-ACGLSPTAATYGCIVKLFTKAGNMAKALD 213

Query: 382 LLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHA 441
           +L++M + G  PN + Y  ++  Y R      A  V++ M   G +PD V Y  L+    
Sbjct: 214 ILEEMDKHGVSPNKMIYAMIMDGYARGGDFTAAFKVWEDMVSAGLKPDIVIYNILVHAFC 273

Query: 442 KAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLV 501
           KAG +D A+ + + ++A  L P   TY+ I++   K G++Q A ++F  +   G  P +V
Sbjct: 274 KAGRMDKALGVLENIEANRLLPTIETYTSILDGYVKGGNIQKALEVFDRIKTAGLRPGVV 333

Query: 502 TYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEM 561
           +YN +++  AKAR  ++A  +  +M   G  P++ +Y+ + E     G +++A  +F  M
Sbjct: 334 SYNSLLSGLAKARQMENARLMLNEMLANGVVPNERSYTALTEGYARAGDVEKAFGMFQRM 393

Query: 562 RRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQL 621
           +++N   D   YG L+    K+G +++A E ++ +  AGL+ N  T  ++L  + R G+L
Sbjct: 394 KKENLAIDIVAYGALLKACCKSGAMQRAAEVFQQITDAGLKHNRITYCTMLDGWARKGEL 453

Query: 622 SDAYHLLQGMLNLGLKPSLQTYTLLLSCC 650
           S A  LL  M   G       YT  +  C
Sbjct: 454 SKARDLLNDMQKHGFHLDTICYTSFIKAC 482



 Score =  137 bits (346), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 79/292 (27%), Positives = 148/292 (50%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           G + +E  + +++     A    A     ++   +   P  + YN ++ +Y +A  +   
Sbjct: 82  GIQLNEAVFCSIISGYASAGNNEAAEHWFEKFKAENLVPGGIVYNSIVQAYCQAGNMETV 141

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
             +  QM+  G + +   Y T+++  A+    +  +  + +++A GLSP   TY  I+  
Sbjct: 142 EALLAQMEEEGFQGNLGLYTTVLNGFAEIRDEEKCLSFFHRLKACGLSPTAATYGCIVKL 201

Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPD 534
             KAG++  A  +  EM   G  PN + Y +++   A+  ++ +A K++ DM +AG +PD
Sbjct: 202 FTKAGNMAKALDILEEMDKHGVSPNKMIYAMIMDGYARGGDFTAAFKVWEDMVSAGLKPD 261

Query: 535 KVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYE 594
            V Y+I++      G +D+A  V   +     +P    Y  ++D + K GN++KA E ++
Sbjct: 262 IVIYNILVHAFCKAGRMDKALGVLENIEANRLLPTIETYTSILDGYVKGGNIQKALEVFD 321

Query: 595 AMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLL 646
            +  AGLRP V + NSLLS   +  Q+ +A  +L  ML  G+ P+ ++YT L
Sbjct: 322 RIKTAGLRPGVVSYNSLLSGLAKARQMENARLMLNEMLANGVVPNERSYTAL 373



 Score =  130 bits (326), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 72/285 (25%), Positives = 141/285 (49%)

Query: 363 YTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQ 422
           Y  +V    R     A     + M     +PNV  Y  LIH+Y  A  +  A+   ++M 
Sbjct: 20  YGLLVDFYARHGDKVAARATFEAMRASHIKPNVHIYTSLIHAYAEARDMEGAVACTEEML 79

Query: 423 VVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQ 482
             G + +   +C++I  +A AG  + A   ++K +A  L P    Y+ I+    +AG+++
Sbjct: 80  SQGIQLNEAVFCSIISGYASAGNNEAAEHWFEKFKAENLVPGGIVYNSIVQAYCQAGNME 139

Query: 483 AAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVM 542
               L  +M  +G   NL  Y  ++   A+ R+ +  L  +  ++  G  P   TY  ++
Sbjct: 140 TVEALLAQMEEEGFQGNLGLYTTVLNGFAEIRDEEKCLSFFHRLKACGLSPTAATYGCIV 199

Query: 543 EVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLR 602
           ++    G + +A  +  EM +    P++ +Y +++D + + G+   A++ +E M+ AGL+
Sbjct: 200 KLFTKAGNMAKALDILEEMDKHGVSPNKMIYAMIMDGYARGGDFTAAFKVWEDMVSAGLK 259

Query: 603 PNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
           P++   N L+ AF + G++  A  +L+ +    L P+++TYT +L
Sbjct: 260 PDIVIYNILVHAFCKAGRMDKALGVLENIEANRLLPTIETYTSIL 304



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 77/316 (24%), Positives = 148/316 (46%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           G   ++  Y  ++    R   F A  K+ + MV  G +P++V YN L+H++ +A  +++A
Sbjct: 222 GVSPNKMIYAMIMDGYARGGDFTAAFKVWEDMVSAGLKPDIVIYNILVHAFCKAGRMDKA 281

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
           L V + ++     P   TY +++D + K G +  A++++ +++ AGL P   +Y+ +++ 
Sbjct: 282 LGVLENIEANRLLPTIETYTSILDGYVKGGNIQKALEVFDRIKTAGLRPGVVSYNSLLSG 341

Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPD 534
           L KA  ++ A  +  EM+  G +PN  +Y  +    A+A + + A  +++ M+      D
Sbjct: 342 LAKARQMENARLMLNEMLANGVVPNERSYTALTEGYARAGDVEKAFGMFQRMKKENLAID 401

Query: 535 KVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYE 594
            V Y  +++     G +  A  VF ++       +   Y  ++D W + G + KA +   
Sbjct: 402 IVAYGALLKACCKSGAMQRAAEVFQQITDAGLKHNRITYCTMLDGWARKGELSKARDLLN 461

Query: 595 AMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEAR 654
            M + G   +     S + A  R G   +    L  M    L+ + +TYT L+     A 
Sbjct: 462 DMQKHGFHLDTICYTSFIKACFRSGDTEEVTETLAVMREKKLEVNARTYTTLIHGWLAAA 521

Query: 655 SPYDMGFCHELMAVSG 670
            P     C+E    SG
Sbjct: 522 DPDQAISCYEQAKASG 537



 Score =  105 bits (262), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 71/258 (27%), Positives = 118/258 (45%), Gaps = 3/258 (1%)

Query: 362 TYTTMVGILGRARQFGAINKLL---DQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVF 418
           T  T   IL    + G I K L   D++   G +P VV+YN L+    +A  +  A  + 
Sbjct: 296 TIETYTSILDGYVKGGNIQKALEVFDRIKTAGLRPGVVSYNSLLSGLAKARQMENARLML 355

Query: 419 KQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKA 478
            +M   G  P+  +Y  L + +A+AG ++ A  M+++M+   L+ D   Y  ++    K+
Sbjct: 356 NEMLANGVVPNERSYTALTEGYARAGDVEKAFGMFQRMKKENLAIDIVAYGALLKACCKS 415

Query: 479 GHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTY 538
           G +Q A ++F ++ + G   N +TY  M+   A+      A  L  DMQ  GF  D + Y
Sbjct: 416 GAMQRAAEVFQQITDAGLKHNRITYCTMLDGWARKGELSKARDLLNDMQKHGFHLDTICY 475

Query: 539 SIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQ 598
           +  ++     G  +E     A MR K    +   Y  L+  W  A +  +A   YE    
Sbjct: 476 TSFIKACFRSGDTEEVTETLAVMREKKLEVNARTYTTLIHGWLAAADPDQAISCYEQAKA 535

Query: 599 AGLRPNVPTCNSLLSAFL 616
           +GL+ +    N LLS  +
Sbjct: 536 SGLQLDSALSNCLLSGLI 553



 Score = 71.2 bits (173), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 56/241 (23%), Positives = 98/241 (40%), Gaps = 36/241 (14%)

Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLI 402
           AL  F+ ++  AG +    +Y +++  L +ARQ      +L++M+ +G  PN  +Y  L 
Sbjct: 316 ALEVFDRIK-TAGLRPGVVSYNSLLSGLAKARQMENARLMLNEMLANGVVPNERSYTALT 374

Query: 403 HSYGRANYLNEAL-----------------------------------DVFKQMQVVGCE 427
             Y RA  + +A                                    +VF+Q+   G +
Sbjct: 375 EGYARAGDVEKAFGMFQRMKKENLAIDIVAYGALLKACCKSGAMQRAAEVFQQITDAGLK 434

Query: 428 PDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQL 487
            +R+TYCT++D  A+ G L  A D+   MQ  G   DT  Y+  I    ++G  +   + 
Sbjct: 435 HNRITYCTMLDGWARKGELSKARDLLNDMQKHGFHLDTICYTSFIKACFRSGDTEEVTET 494

Query: 488 FCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGH 547
              M  +    N  TY  +I     A +   A+  Y   + +G + D    + ++  L  
Sbjct: 495 LAVMREKKLEVNARTYTTLIHGWLAAADPDQAISCYEQAKASGLQLDSALSNCLLSGLIS 554

Query: 548 C 548
           C
Sbjct: 555 C 555


>gi|449457845|ref|XP_004146658.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g46100-like [Cucumis sativus]
 gi|449484609|ref|XP_004156929.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g46100-like [Cucumis sativus]
          Length = 501

 Score =  146 bits (369), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 92/320 (28%), Positives = 157/320 (49%), Gaps = 2/320 (0%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           GFKHD +T++ M+  L  A QF     LLD+M  +           +  +YGR +   ++
Sbjct: 74  GFKHDLNTFSLMISKLISANQFRLAETLLDRMKEEKIDVTEDILLSICRAYGRIHKPLDS 133

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
           + VF +MQ   C+P   +Y +++ I  +   L  A   Y+ M+  G+ P   + +V+I  
Sbjct: 134 IRVFHKMQDFHCKPTEKSYISVLAILVEENQLKSAFRFYRDMRKMGIPPTVTSLNVLIKA 193

Query: 475 LGK-AGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEP 533
             K +G +  A  LF  M N GC P+  TY  +I    + R+   A +L ++M+  G  P
Sbjct: 194 FCKNSGTMDKAMHLFRTMSNHGCEPDSYTYGTLINGLCRFRSIVEAKELLQEMETKGCSP 253

Query: 534 DKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWY 593
             VTY+ ++  L     +DEA  +  +M+ KN  P+   Y  L+D + K G+  +A +  
Sbjct: 254 SVVTYTSIIHGLCQLNNVDEAMRLLEDMKDKNIEPNVFTYSSLMDGFCKTGHSSRARDIL 313

Query: 594 EAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSC-CTE 652
           E M+Q  LRPN+ + ++LL+     G++++A  +   M   G KP    Y  +++C C  
Sbjct: 314 ELMIQKRLRPNMISYSTLLNGLCNEGKINEALEIFDRMKLQGFKPDAGLYGKIVNCLCDV 373

Query: 653 ARSPYDMGFCHELMAVSGHP 672
           +R      F  E++     P
Sbjct: 374 SRFQEAANFLDEMVLCGIKP 393



 Score =  116 bits (291), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 81/304 (26%), Positives = 137/304 (45%), Gaps = 28/304 (9%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           G + D +TY T++  L R R      +LL +M   GC P+VVTY  +IH   + N ++EA
Sbjct: 215 GCEPDSYTYGTLINGLCRFRSIVEAKELLQEMETKGCSPSVVTYTSIIHGLCQLNNVDEA 274

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
           + + + M+    EP+  TY +L+D   K G    A D+ + M    L P+  +YS ++N 
Sbjct: 275 MRLLEDMKDKNIEPNVFTYSSLMDGFCKTGHSSRARDILELMIQKRLRPNMISYSTLLNG 334

Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPD 534
           L   G +  A ++F  M  QG  P+   Y  ++        +Q A     +M   G +P+
Sbjct: 335 LCNEGKINEALEIFDRMKLQGFKPDAGLYGKIVNCLCDVSRFQEAANFLDEMVLCGIKPN 394

Query: 535 KVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYE 594
           ++T+S+                    +R  N V    ++GL         N  +A++ Y 
Sbjct: 395 RITWSL-------------------HVRTHNRV----IHGLCT-----INNSNRAFQLYL 426

Query: 595 AMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEAR 654
           ++L  G+   V T NSLL  F     L     +L  M+  G  P  + ++ +++C  + R
Sbjct: 427 SVLTRGISITVDTFNSLLKCFCNKKDLPKTSRILDEMVINGCIPQGEMWSTMVNCFCDER 486

Query: 655 SPYD 658
              D
Sbjct: 487 KACD 490



 Score = 57.0 bits (136), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 50/238 (21%), Positives = 92/238 (38%), Gaps = 56/238 (23%)

Query: 329 QANQVLKQLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVR 388
           +A ++L+ ++D  +    F +     GF    H+         RAR       +L+ M++
Sbjct: 273 EAMRLLEDMKDKNIEPNVFTYSSLMDGFCKTGHS--------SRARD------ILELMIQ 318

Query: 389 DGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTY-------CTLIDIHA 441
              +PN+++Y+ L++       +NEAL++F +M++ G +PD   Y       C +     
Sbjct: 319 KRLRPNMISYSTLLNGLCNEGKINEALEIFDRMKLQGFKPDAGLYGKIVNCLCDVSRFQE 378

Query: 442 KAGFLDV-----------------------------------AMDMYKKMQAAGLSPDTF 466
            A FLD                                    A  +Y  +   G+S    
Sbjct: 379 AANFLDEMVLCGIKPNRITWSLHVRTHNRVIHGLCTINNSNRAFQLYLSVLTRGISITVD 438

Query: 467 TYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYR 524
           T++ ++ C      L    ++  EMV  GCIP    ++ M+      R    A+KL +
Sbjct: 439 TFNSLLKCFCNKKDLPKTSRILDEMVINGCIPQGEMWSTMVNCFCDERKACDAMKLLQ 496


>gi|413924892|gb|AFW64824.1| hypothetical protein ZEAMMB73_716034 [Zea mays]
          Length = 721

 Score =  146 bits (369), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 98/298 (32%), Positives = 140/298 (46%), Gaps = 4/298 (1%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           R  G   D  TY +++    +A        LL  + R G  P V+TYN LI  Y R   L
Sbjct: 370 RAMGLLPDVITYNSLLNRYCKAGNLKEALWLLGDLRRAGLAPTVLTYNTLIDGYCRLGDL 429

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
            EA  + ++M   GC PD  TY  L++   K   L +A + + +M + GL PD F Y+  
Sbjct: 430 AEARRLKEEMVEQGCFPDVCTYTILMNGSRKVRNLAMAREFFDEMLSKGLQPDCFAYNTR 489

Query: 472 INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF 531
           I           A QL   M+ +G  P+ VTYN++I    K  N + A +L   M + G 
Sbjct: 490 ICAELTLSSTPMAFQLREVMMLKGIYPDTVTYNVIIDGLCKTGNLKDAKRLKTKMVSDGL 549

Query: 532 EPDKVTYSIVMEVLGHC--GYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKA 589
           +PD +TY+ ++    HC  G L EA  +   M      P    Y +LV    + GN+  A
Sbjct: 550 QPDCITYTCLIH--AHCERGLLREARKLLNGMVSDGLQPSVVTYTILVHTCCRRGNLYSA 607

Query: 590 WEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
           + W+  ML  G+ PN  T N L+ A    G+   A+     ML  GL P+  TYTLL+
Sbjct: 608 YGWFRKMLDVGIEPNEITYNVLIHALCMTGRTPLAFRHFHEMLERGLAPNKYTYTLLI 665



 Score =  146 bits (368), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 93/306 (30%), Positives = 154/306 (50%), Gaps = 1/306 (0%)

Query: 362 TYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQM 421
           TY  ++  L +  Q  A      +M   G  P+V+TYN L++ Y +A  L EAL +   +
Sbjct: 345 TYNAIIHGLLKCEQAEAAQVKFAEMRAMGLLPDVITYNSLLNRYCKAGNLKEALWLLGDL 404

Query: 422 QVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHL 481
           +  G  P  +TY TLID + + G L  A  + ++M   G  PD  TY++++N   K  +L
Sbjct: 405 RRAGLAPTVLTYNTLIDGYCRLGDLAEARRLKEEMVEQGCFPDVCTYTILMNGSRKVRNL 464

Query: 482 QAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIV 541
             A + F EM+++G  P+   YN  I  +    +   A +L   M   G  PD VTY+++
Sbjct: 465 AMAREFFDEMLSKGLQPDCFAYNTRICAELTLSSTPMAFQLREVMMLKGIYPDTVTYNVI 524

Query: 542 MEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGL 601
           ++ L   G L +A+ +  +M      PD   Y  L+    + G +R+A +    M+  GL
Sbjct: 525 IDGLCKTGNLKDAKRLKTKMVSDGLQPDCITYTCLIHAHCERGLLREARKLLNGMVSDGL 584

Query: 602 RPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL-SCCTEARSPYDMG 660
           +P+V T   L+    R G L  AY   + ML++G++P+  TY +L+ + C   R+P    
Sbjct: 585 QPSVVTYTILVHTCCRRGNLYSAYGWFRKMLDVGIEPNEITYNVLIHALCMTGRTPLAFR 644

Query: 661 FCHELM 666
             HE++
Sbjct: 645 HFHEML 650



 Score =  132 bits (333), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 102/353 (28%), Positives = 158/353 (44%), Gaps = 27/353 (7%)

Query: 291 FASTGNVVESVSRILRQWKWGPLAEEALGNT----NYSMDAYQANQVL---KQLQDHTVA 343
           +   GN+ E++      W  G L    L  T    N  +D Y     L   ++L++  V 
Sbjct: 388 YCKAGNLKEAL------WLLGDLRRAGLAPTVLTYNTLIDGYCRLGDLAEARRLKEEMVE 441

Query: 344 LGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIH 403
            G F           D  TYT ++    + R      +  D+M+  G QP+   YN  I 
Sbjct: 442 QGCFP----------DVCTYTILMNGSRKVRNLAMAREFFDEMLSKGLQPDCFAYNTRIC 491

Query: 404 SYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSP 463
           +    +    A  + + M + G  PD VTY  +ID   K G L  A  +  KM + GL P
Sbjct: 492 AELTLSSTPMAFQLREVMMLKGIYPDTVTYNVIIDGLCKTGNLKDAKRLKTKMVSDGLQP 551

Query: 464 DTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLY 523
           D  TY+ +I+   + G L+ A +L   MV+ G  P++VTY I++    +  N  SA   +
Sbjct: 552 DCITYTCLIHAHCERGLLREARKLLNGMVSDGLQPSVVTYTILVHTCCRRGNLYSAYGWF 611

Query: 524 RDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKA 583
           R M + G EP+++TY++++  L   G    A   F EM  +   P++  Y LL+D   + 
Sbjct: 612 RKMLDVGIEPNEITYNVLIHALCMTGRTPLAFRHFHEMLERGLAPNKYTYTLLIDGNCRE 671

Query: 584 GNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGL 636
           GN   A   Y  M Q G+ P+  T N+L   F         YH ++ M N+ L
Sbjct: 672 GNWADAIRLYFEMHQNGIPPDYCTHNALFKGF----DEGHMYHAIEYMENIVL 720



 Score =  132 bits (331), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 90/296 (30%), Positives = 135/296 (45%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           R+AG      TY T++    R        +L ++MV  GC P+V TY  L++   +   L
Sbjct: 405 RRAGLAPTVLTYNTLIDGYCRLGDLAEARRLKEEMVEQGCFPDVCTYTILMNGSRKVRNL 464

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
             A + F +M   G +PD   Y T I          +A  + + M   G+ PDT TY+VI
Sbjct: 465 AMAREFFDEMLSKGLQPDCFAYNTRICAELTLSSTPMAFQLREVMMLKGIYPDTVTYNVI 524

Query: 472 INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF 531
           I+ L K G+L+ A +L  +MV+ G  P+ +TY  +I    +    + A KL   M + G 
Sbjct: 525 IDGLCKTGNLKDAKRLKTKMVSDGLQPDCITYTCLIHAHCERGLLREARKLLNGMVSDGL 584

Query: 532 EPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWE 591
           +P  VTY+I++      G L  A   F +M      P+E  Y +L+      G    A+ 
Sbjct: 585 QPSVVTYTILVHTCCRRGNLYSAYGWFRKMLDVGIEPNEITYNVLIHALCMTGRTPLAFR 644

Query: 592 WYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
            +  ML+ GL PN  T   L+    R G  +DA  L   M   G+ P   T+  L 
Sbjct: 645 HFHEMLERGLAPNKYTYTLLIDGNCREGNWADAIRLYFEMHQNGIPPDYCTHNALF 700



 Score =  125 bits (314), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 85/261 (32%), Positives = 136/261 (52%), Gaps = 3/261 (1%)

Query: 390 GCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVA 449
           G  P+V   NR++     A   ++   V+ +M  +  EP  VTY TL+D   K G  D A
Sbjct: 197 GVAPDVRDCNRVLRVLRDAARWDDVRAVYGEMLQLRVEPTIVTYNTLLDSFLKEGRKDEA 256

Query: 450 MDMYKKM--QAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMI 507
             + K+M  Q  G S +  T++V+I+ L + GHL+ A +L   M       +  TYN +I
Sbjct: 257 SMLLKEMETQGGGFSLNDVTFNVVISFLAREGHLENAVKLVDSMRLSKKASSF-TYNPLI 315

Query: 508 ALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWV 567
               +    + A  L  +M+N G  P  VTY+ ++  L  C   + A+  FAEMR    +
Sbjct: 316 TALLERGFVRKAEALQMEMENEGIMPTVVTYNAIIHGLLKCEQAEAAQVKFAEMRAMGLL 375

Query: 568 PDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHL 627
           PD   Y  L++ + KAGN+++A      + +AGL P V T N+L+  + R+G L++A  L
Sbjct: 376 PDVITYNSLLNRYCKAGNLKEALWLLGDLRRAGLAPTVLTYNTLIDGYCRLGDLAEARRL 435

Query: 628 LQGMLNLGLKPSLQTYTLLLS 648
            + M+  G  P + TYT+L++
Sbjct: 436 KEEMVEQGCFPDVCTYTILMN 456



 Score =  118 bits (295), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 86/319 (26%), Positives = 154/319 (48%), Gaps = 5/319 (1%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           G   D      ++ +L  A ++  +  +  +M++   +P +VTYN L+ S+ +    +EA
Sbjct: 197 GVAPDVRDCNRVLRVLRDAARWDDVRAVYGEMLQLRVEPTIVTYNTLLDSFLKEGRKDEA 256

Query: 415 LDVFKQMQVV--GCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
             + K+M+    G   + VT+  +I   A+ G L+ A+ +   M+ +     +FTY+ +I
Sbjct: 257 SMLLKEMETQGGGFSLNDVTFNVVISFLAREGHLENAVKLVDSMRLSK-KASSFTYNPLI 315

Query: 473 NCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFE 532
             L + G ++ A  L  EM N+G +P +VTYN +I    K    ++A   + +M+  G  
Sbjct: 316 TALLERGFVRKAEALQMEMENEGIMPTVVTYNAIIHGLLKCEQAEAAQVKFAEMRAMGLL 375

Query: 533 PDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEW 592
           PD +TY+ ++      G L EA  +  ++RR    P    Y  L+D + + G++ +A   
Sbjct: 376 PDVITYNSLLNRYCKAGNLKEALWLLGDLRRAGLAPTVLTYNTLIDGYCRLGDLAEARRL 435

Query: 593 YEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTE 652
            E M++ G  P+V T   L++   +V  L+ A      ML+ GL+P    Y   + C   
Sbjct: 436 KEEMVEQGCFPDVCTYTILMNGSRKVRNLAMAREFFDEMLSKGLQPDCFAYNTRI-CAEL 494

Query: 653 ARSPYDMGF-CHELMAVSG 670
             S   M F   E+M + G
Sbjct: 495 TLSSTPMAFQLREVMMLKG 513



 Score =  117 bits (293), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 83/288 (28%), Positives = 141/288 (48%), Gaps = 3/288 (1%)

Query: 362 TYTTMVGILGRARQFGAINKLLDQMVRDG--CQPNVVTYNRLIHSYGRANYLNEALDVFK 419
           TY T++    +  +    + LL +M   G     N VT+N +I    R  +L  A+ +  
Sbjct: 239 TYNTLLDSFLKEGRKDEASMLLKEMETQGGGFSLNDVTFNVVISFLAREGHLENAVKLVD 298

Query: 420 QMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAG 479
            M++   +    TY  LI    + GF+  A  +  +M+  G+ P   TY+ II+ L K  
Sbjct: 299 SMRLSK-KASSFTYNPLITALLERGFVRKAEALQMEMENEGIMPTVVTYNAIIHGLLKCE 357

Query: 480 HLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYS 539
             +AA   F EM   G +P+++TYN ++    KA N + AL L  D++ AG  P  +TY+
Sbjct: 358 QAEAAQVKFAEMRAMGLLPDVITYNSLLNRYCKAGNLKEALWLLGDLRRAGLAPTVLTYN 417

Query: 540 IVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQA 599
            +++     G L EA  +  EM  +   PD   Y +L++   K  N+  A E+++ ML  
Sbjct: 418 TLIDGYCRLGDLAEARRLKEEMVEQGCFPDVCTYTILMNGSRKVRNLAMAREFFDEMLSK 477

Query: 600 GLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
           GL+P+    N+ + A L +     A+ L + M+  G+ P   TY +++
Sbjct: 478 GLQPDCFAYNTRICAELTLSSTPMAFQLREVMMLKGIYPDTVTYNVII 525



 Score = 67.0 bits (162), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 56/231 (24%), Positives = 95/231 (41%), Gaps = 36/231 (15%)

Query: 453 YKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAK 512
           ++ +   G++PD    + ++  L  A        ++ EM+     P +VTYN ++    K
Sbjct: 190 FRLVTCHGVAPDVRDCNRVLRVLRDAARWDDVRAVYGEMLQLRVEPTIVTYNTLLDSFLK 249

Query: 513 ARNYQSALKLYRDM--QNAGFEPDKVTYSIVMEVL---GHC------------------- 548
                 A  L ++M  Q  GF  + VT+++V+  L   GH                    
Sbjct: 250 EGRKDEASMLLKEMETQGGGFSLNDVTFNVVISFLAREGHLENAVKLVDSMRLSKKASSF 309

Query: 549 ------------GYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAM 596
                       G++ +AEA+  EM  +  +P    Y  ++    K      A   +  M
Sbjct: 310 TYNPLITALLERGFVRKAEALQMEMENEGIMPTVVTYNAIIHGLLKCEQAEAAQVKFAEM 369

Query: 597 LQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
              GL P+V T NSLL+ + + G L +A  LL  +   GL P++ TY  L+
Sbjct: 370 RAMGLLPDVITYNSLLNRYCKAGNLKEALWLLGDLRRAGLAPTVLTYNTLI 420


>gi|356495784|ref|XP_003516753.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22670,
           mitochondrial-like [Glycine max]
          Length = 558

 Score =  146 bits (369), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 95/352 (26%), Positives = 178/352 (50%), Gaps = 3/352 (0%)

Query: 298 VESVSRILRQWKWGP-LAEEALGNTNYSMDAYQANQVLKQL-QDHTVALGFFNWLRRQAG 355
           +E+V+++L++    P LA  AL   ++   +   +QVL +   D   ALGFF W +   G
Sbjct: 97  LEAVTKVLQKRYPSPELASLALDGLSFQPSSGLVSQVLNRFSNDWVPALGFFKWAKSLTG 156

Query: 356 FKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEAL 415
           ++H    Y  MV ILG+ R F ++++L+++M R      + T  +++    RA    +A+
Sbjct: 157 YRHSPELYNLMVDILGKCRSFDSMSELVEEMARLEGYVTLETMTKVMRRLARARKHEDAI 216

Query: 416 DVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCL 475
           + F +M+  G + D      LID   K   ++ A  +  + + + +   + +++V+++  
Sbjct: 217 EAFGRMEKFGVKKDTAALNVLIDALVKGDSVEHAHKVVLEFKGS-IPLSSRSFNVLMHGW 275

Query: 476 GKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDK 535
            +A     A +   +M   G  P++ +Y   I      R+++   ++  +M+  G  P+ 
Sbjct: 276 CRARDFDNARKAMEDMKEHGFEPDVFSYTNFIEAYGHERDFRKVDQVLEEMRENGCPPNA 335

Query: 536 VTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEA 595
           VTY+ VM  LG  G L +A  V+ +M+    V D P Y  ++ + GKAG ++ A + +E 
Sbjct: 336 VTYTSVMLHLGKAGQLRKALEVYEKMKSDGCVADTPFYSSMIFILGKAGRLKDACDVFED 395

Query: 596 MLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
           M + G+  +V T NS++S      +   A  LL+ M +   KP++ TY  LL
Sbjct: 396 MPKQGVVRDVVTYNSMISTACAHSREETALRLLKEMEDGSCKPNVGTYHRLL 447



 Score =  136 bits (342), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 84/274 (30%), Positives = 140/274 (51%), Gaps = 11/274 (4%)

Query: 372 RARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRV 431
           RAR F    K ++ M   G +P+V +Y   I +YG      +   V ++M+  GC P+ V
Sbjct: 277 RARDFDNARKAMEDMKEHGFEPDVFSYTNFIEAYGHERDFRKVDQVLEEMRENGCPPNAV 336

Query: 432 TYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEM 491
           TY +++    KAG L  A+++Y+KM++ G   DT  YS +I  LGKAG L+ A  +F +M
Sbjct: 337 TYTSVMLHLGKAGQLRKALEVYEKMKSDGCVADTPFYSSMIFILGKAGRLKDACDVFEDM 396

Query: 492 VNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYL 551
             QG + ++VTYN MI+        ++AL+L ++M++   +P+  TY  ++++      +
Sbjct: 397 PKQGVVRDVVTYNSMISTACAHSREETALRLLKEMEDGSCKPNVGTYHRLLKMCCKKKRM 456

Query: 552 DEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTC--- 608
              + +   M + N  PD   Y LLV+   K+G V  A+ + E M+  G  P   T    
Sbjct: 457 KVLKFLLDHMFKNNISPDLATYSLLVNALRKSGKVEDAYSFLEEMVLRGFTPKPSTLKKL 516

Query: 609 ------NSLLSAFLRVGQLSDAYHLLQGMLNLGL 636
                  S+L   +RV +  D +   Q ++  GL
Sbjct: 517 AGELESKSMLEEKVRVEEWMDRFS--QNLIRPGL 548



 Score =  119 bits (297), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 74/257 (28%), Positives = 128/257 (49%), Gaps = 3/257 (1%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           ++ GF+ D  +YT  +   G  R F  ++++L++M  +GC PN VTY  ++   G+A  L
Sbjct: 292 KEHGFEPDVFSYTNFIEAYGHERDFRKVDQVLEEMRENGCPPNAVTYTSVMLHLGKAGQL 351

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
            +AL+V+++M+  GC  D   Y ++I I  KAG L  A D+++ M   G+  D  TY+ +
Sbjct: 352 RKALEVYEKMKSDGCVADTPFYSSMIFILGKAGRLKDACDVFEDMPKQGVVRDVVTYNSM 411

Query: 472 INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF 531
           I+        + A +L  EM +  C PN+ TY+ ++ +  K +  +    L   M     
Sbjct: 412 ISTACAHSREETALRLLKEMEDGSCKPNVGTYHRLLKMCCKKKRMKVLKFLLDHMFKNNI 471

Query: 532 EPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLV-DLWGKAGNVRK-- 588
            PD  TYS+++  L   G +++A +   EM  + + P       L  +L  K+    K  
Sbjct: 472 SPDLATYSLLVNALRKSGKVEDAYSFLEEMVLRGFTPKPSTLKKLAGELESKSMLEEKVR 531

Query: 589 AWEWYEAMLQAGLRPNV 605
             EW +   Q  +RP +
Sbjct: 532 VEEWMDRFSQNLIRPGL 548


>gi|356574085|ref|XP_003555182.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g20740-like [Glycine max]
          Length = 733

 Score =  146 bits (369), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 108/441 (24%), Positives = 199/441 (45%), Gaps = 13/441 (2%)

Query: 332 QVLKQLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGC 391
           +VLK   +HT+A  FF+W   Q G+ H+  +Y  +   L R  QF A ++L + M   G 
Sbjct: 136 EVLKVQTNHTLASKFFHWAGSQRGYHHNFASYNALAYCLNRHHQFRAADQLPELMESQGK 195

Query: 392 QPNVVTYNRLIHSYGRANYLNEALDVFKQMQ-VVGCEPDRVTYCTLIDIHAKAGFLDVAM 450
            P+   +  LI  +  AN       V+++M+   G +P    Y  ++D   + G LD+A+
Sbjct: 196 PPSEKQFEILIRMHSDANRGLRVYHVYEKMRNKFGVKPRVFLYNRVMDALVRTGHLDLAL 255

Query: 451 DMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQ 510
            +Y  ++  GL  ++ T+ V++  L K G +    ++   M  + C P++  Y  ++ + 
Sbjct: 256 SVYDDLKEDGLVEESVTFMVLVKGLCKCGRIDEMLEVLGRMRERLCKPDVFAYTALVKIL 315

Query: 511 AKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDE 570
             A N  + L+++ +M+    EPD   Y+ ++  L   G + E   +F EM+ K  + D 
Sbjct: 316 VPAGNLDACLRVWEEMKRDRVEPDVKAYATMIVGLAKGGRVQEGYELFREMKGKGCLVDR 375

Query: 571 PVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQG 630
            +YG LV+ +   G V  A++  + ++ +G R ++     L+     + ++  AY L Q 
Sbjct: 376 VIYGALVEAFVAEGKVELAFDLLKDLVSSGYRADLGIYICLIEGLCNLNRVQKAYKLFQL 435

Query: 631 MLNLGLKPSLQTYTLLLSCCTEARSPYDMGFCHELMAVSGHP-----AHMFLLSMPSPGP 685
            +  GL+P   T   LL    EA    +     E M   G P     +  F + +   GP
Sbjct: 436 TVREGLEPDFLTVKPLLVAYAEANRMEEFCKLLEQMQKLGFPVIADLSKFFSVLVEKKGP 495

Query: 686 DGQNVRDHVGSFLEMMHSEDRESKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDA 745
                 +  G   E  H         + +  +D LHK G  ++A S+++     ++ PD+
Sbjct: 496 --IMALETFGQLKEKGHVSVE-----IYNIFMDSLHKIGEVKKALSLFDEMKGLSLKPDS 548

Query: 746 VKEKGMSYWLINLHVMSDGTA 766
                    L++L  + +  A
Sbjct: 549 FTYCTAILCLVDLGEIKEACA 569



 Score =  115 bits (289), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 105/428 (24%), Positives = 185/428 (43%), Gaps = 9/428 (2%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           R+   K D   YT +V IL  A    A  ++ ++M RD  +P+V  Y  +I    +   +
Sbjct: 297 RERLCKPDVFAYTALVKILVPAGNLDACLRVWEEMKRDRVEPDVKAYATMIVGLAKGGRV 356

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
            E  ++F++M+  GC  DRV Y  L++     G +++A D+ K + ++G   D   Y  +
Sbjct: 357 QEGYELFREMKGKGCLVDRVIYGALVEAFVAEGKVELAFDLLKDLVSSGYRADLGIYICL 416

Query: 472 INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF 531
           I  L     +Q A++LF   V +G  P+ +T   ++   A+A   +   KL   MQ  GF
Sbjct: 417 IEGLCNLNRVQKAYKLFQLTVREGLEPDFLTVKPLLVAYAEANRMEEFCKLLEQMQKLGF 476

Query: 532 EPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWE 591
            P     S    VL        A   F +++ K  V  E +Y + +D   K G V+KA  
Sbjct: 477 -PVIADLSKFFSVLVEKKGPIMALETFGQLKEKGHVSVE-IYNIFMDSLHKIGEVKKALS 534

Query: 592 WYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTY-TLLLSCC 650
            ++ M    L+P+  T  + +   + +G++ +A      ++ +   PS+  Y +L    C
Sbjct: 535 LFDEMKGLSLKPDSFTYCTAILCLVDLGEIKEACACHNRIIEMSCIPSVAAYSSLTKGLC 594

Query: 651 TEARSPYDMGFCHELMA-VSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRESK 709
                   M    + +  VS  P   F  S+        NV + V   L  M  +     
Sbjct: 595 QIGEIDEAMLLVRDCLGNVSDGPLE-FKYSLTIIHACKSNVAEKVIDVLNEMIEQGCSLD 653

Query: 710 RGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAVKEKGMSYWLINLHVMSDGTAVIA 769
             +  +++  + K G  EEA  V+    ++N   ++     + Y  + +  M   TA + 
Sbjct: 654 NVIYCSIISGMCKHGTIEEARKVFSNLRERNFLTES---NTIVYDELLIDHMKKKTADLV 710

Query: 770 LSRTLAWF 777
           LS +L +F
Sbjct: 711 LS-SLKFF 717


>gi|147845950|emb|CAN82028.1| hypothetical protein VITISV_000613 [Vitis vinifera]
          Length = 790

 Score =  146 bits (369), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 66/183 (36%), Positives = 115/183 (62%)

Query: 359 DEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVF 418
           D   Y T++  LG+ ++   ++ L ++M +DG  P++ +YN LI S+GRA  + EA+ +F
Sbjct: 500 DTVMYNTVLSALGKLKKTSDLHDLYEKMKQDGPSPDIFSYNILISSFGRAGRVEEAVKIF 559

Query: 419 KQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKA 478
           ++++   C+PD +++ +LI+   K G +D A   +K+M+  GLSPD  TYS +I C GK 
Sbjct: 560 EELENSSCKPDIISFNSLINCLGKNGDIDEAHMRFKEMREEGLSPDVVTYSTLIECFGKT 619

Query: 479 GHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTY 538
             ++ A +LF EM+ +GC PN+VTYNI++    ++     A+ LY  ++  G  PD +TY
Sbjct: 620 DKVEMACRLFDEMLAEGCSPNIVTYNILLDCLERSGRTAEAVDLYAKLKQQGLTPDSITY 679

Query: 539 SIV 541
           +++
Sbjct: 680 AVL 682



 Score =  137 bits (345), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 86/328 (26%), Positives = 154/328 (46%), Gaps = 34/328 (10%)

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIH---SYGRAN 409
           + G+  +   Y TM+  L   R       L  +MV + C+PN  T++ +++   + G+  
Sbjct: 355 EKGYTPNLIAYNTMIQALANNRMVDKTIFLFSKMVENNCRPNGFTFSVILNVLVAEGQLG 414

Query: 410 YLNEALDV-------------FKQMQVVGC------------------EPDRVTYCTLID 438
            L+E ++V              + +  +G                   E DR  Y ++++
Sbjct: 415 RLDEVVEVSNKFMNKSIYAYLVRTLSKLGHASEAHRLLHLQYDWSFHDEGDRDAYMSMLE 474

Query: 439 IHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIP 498
               AG    A+D+  K+    +S DT  Y+ +++ LGK       H L+ +M   G  P
Sbjct: 475 SLCDAGKTTEALDLLSKIHEKRISTDTVMYNTVLSALGKLKKTSDLHDLYEKMKQDGPSP 534

Query: 499 NLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVF 558
           ++ +YNI+I+   +A   + A+K++ +++N+  +PD ++++ ++  LG  G +DEA   F
Sbjct: 535 DIFSYNILISSFGRAGRVEEAVKIFEELENSSCKPDIISFNSLINCLGKNGDIDEAHMRF 594

Query: 559 AEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRV 618
            EMR +   PD   Y  L++ +GK   V  A   ++ ML  G  PN+ T N LL    R 
Sbjct: 595 KEMREEGLSPDVVTYSTLIECFGKTDKVEMACRLFDEMLAEGCSPNIVTYNILLDCLERS 654

Query: 619 GQLSDAYHLLQGMLNLGLKPSLQTYTLL 646
           G+ ++A  L   +   GL P   TY +L
Sbjct: 655 GRTAEAVDLYAKLKQQGLTPDSITYAVL 682



 Score =  120 bits (301), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 78/331 (23%), Positives = 145/331 (43%), Gaps = 46/331 (13%)

Query: 359 DEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVF 418
           DE+TYT M+ + G+  +      L  +M   G  PN++ YN +I +      +++ + +F
Sbjct: 326 DEYTYTIMIRMTGKIGKADESLTLFQEMTEKGYTPNLIAYNTMIQALANNRMVDKTIFLF 385

Query: 419 KQMQVVGCEPDRVTYCTLIDI---HAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCL 475
            +M    C P+  T+  ++++     + G LD  +++  K     +      Y+ ++  L
Sbjct: 386 SKMVENNCRPNGFTFSVILNVLVAEGQLGRLDEVVEVSNKFMNKSI------YAYLVRTL 439

Query: 476 GKAGHLQAAHQL-----------------FCEMVNQGC--------------------IP 498
            K GH   AH+L                 +  M+   C                      
Sbjct: 440 SKLGHASEAHRLLHLQYDWSFHDEGDRDAYMSMLESLCDAGKTTEALDLLSKIHEKRIST 499

Query: 499 NLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVF 558
           + V YN +++   K +       LY  M+  G  PD  +Y+I++   G  G ++EA  +F
Sbjct: 500 DTVMYNTVLSALGKLKKTSDLHDLYEKMKQDGPSPDIFSYNILISSFGRAGRVEEAVKIF 559

Query: 559 AEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRV 618
            E+   +  PD   +  L++  GK G++ +A   ++ M + GL P+V T ++L+  F + 
Sbjct: 560 EELENSSCKPDIISFNSLINCLGKNGDIDEAHMRFKEMREEGLSPDVVTYSTLIECFGKT 619

Query: 619 GQLSDAYHLLQGMLNLGLKPSLQTYTLLLSC 649
            ++  A  L   ML  G  P++ TY +LL C
Sbjct: 620 DKVEMACRLFDEMLAEGCSPNIVTYNILLDC 650



 Score =  116 bits (290), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 63/230 (27%), Positives = 121/230 (52%), Gaps = 3/230 (1%)

Query: 347 FNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYG 406
           ++W     G   D   Y +M+  L  A +      LL ++       + V YN ++ + G
Sbjct: 456 YDWSFHDEG---DRDAYMSMLESLCDAGKTTEALDLLSKIHEKRISTDTVMYNTVLSALG 512

Query: 407 RANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTF 466
           +    ++  D++++M+  G  PD  +Y  LI    +AG ++ A+ ++++++ +   PD  
Sbjct: 513 KLKKTSDLHDLYEKMKQDGPSPDIFSYNILISSFGRAGRVEEAVKIFEELENSSCKPDII 572

Query: 467 TYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDM 526
           +++ +INCLGK G +  AH  F EM  +G  P++VTY+ +I    K    + A +L+ +M
Sbjct: 573 SFNSLINCLGKNGDIDEAHMRFKEMREEGLSPDVVTYSTLIECFGKTDKVEMACRLFDEM 632

Query: 527 QNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLL 576
              G  P+ VTY+I+++ L   G   EA  ++A+++++   PD   Y +L
Sbjct: 633 LAEGCSPNIVTYNILLDCLERSGRTAEAVDLYAKLKQQGLTPDSITYAVL 682



 Score =  110 bits (274), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 124/520 (23%), Positives = 212/520 (40%), Gaps = 100/520 (19%)

Query: 312 PLAEEALGNTNYSMDAYQANQVLKQLQDHTVALGFFNWLRRQA-GFKHDEHTYTTMVGIL 370
           P   E L   N ++   +A+++LK L    ++L FF +       F+H+  TY  ++ IL
Sbjct: 103 PDLSEYLQTLNLTITPSEASEILKCLNHPHLSLEFFRFCSSNIPKFQHNSFTYNRLLVIL 162

Query: 371 GR------ARQFGAINKLLDQMVRDGC--------------------------------Q 392
            +      + +   I  +LD M R G                                 Q
Sbjct: 163 SKPSALRDSERLDLIRAILDDMERCGVRGSISTINILIGIFGGGADVERCFDLVKKWDLQ 222

Query: 393 PNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAK---------- 442
            N  TY  L+ ++ R+N  N+A +V+ +++  G + D   Y  L+D  AK          
Sbjct: 223 MNCYTYKCLLQAHLRSNNSNKAFEVYVELRRRGYKLDIFAYNMLLDALAKDNKLTWNLLL 282

Query: 443 -----AGFLD---VAMD--------------MYKKMQAAGLSPDTFTYSVIINCLGKAGH 480
                A  LD   VA+D              ++K M+     PD +TY+++I   GK G 
Sbjct: 283 VCLQIAELLDCLTVALDNDKIISVEVDQVYMVFKDMKRKHCEPDEYTYTIMIRMTGKIGK 342

Query: 481 LQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSI 540
              +  LF EM  +G  PNL+ YN MI   A  R     + L+  M      P+  T+S+
Sbjct: 343 ADESLTLFQEMTEKGYTPNLIAYNTMIQALANNRMVDKTIFLFSKMVENNCRPNGFTFSV 402

Query: 541 VMEVL---GHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKA-------W 590
           ++ VL   G  G LDE   V       N   ++ +Y  LV    K G+  +A       +
Sbjct: 403 ILNVLVAEGQLGRLDEVVEV------SNKFMNKSIYAYLVRTLSKLGHASEAHRLLHLQY 456

Query: 591 EWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCC 650
           +W  +    G R       S+L +    G+ ++A  LL  +    +      Y  +LS  
Sbjct: 457 DW--SFHDEGDR---DAYMSMLESLCDAGKTTEALDLLSKIHEKRISTDTVMYNTVLSAL 511

Query: 651 TEARSPYDMGFCHELMAVSGHPAHMFL--LSMPSPGPDGQNVRDHVGSFLEMMHSEDRES 708
            + +   D+   +E M   G    +F   + + S G  G+ V + V  F E+   E+   
Sbjct: 512 GKLKKTSDLHDLYEKMKQDGPSPDIFSYNILISSFGRAGR-VEEAVKIFEEL---ENSSC 567

Query: 709 KRGLV--DAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAV 746
           K  ++  +++++ L K+G  +EA   ++   ++ + PD V
Sbjct: 568 KPDIISFNSLINCLGKNGDIDEAHMRFKEMREEGLSPDVV 607



 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 49/160 (30%), Positives = 93/160 (58%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           +Q G   D  +Y  ++   GRA +     K+ +++    C+P+++++N LI+  G+   +
Sbjct: 528 KQDGPSPDIFSYNILISSFGRAGRVEEAVKIFEELENSSCKPDIISFNSLINCLGKNGDI 587

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
           +EA   FK+M+  G  PD VTY TLI+   K   +++A  ++ +M A G SP+  TY+++
Sbjct: 588 DEAHMRFKEMREEGLSPDVVTYSTLIECFGKTDKVEMACRLFDEMLAEGCSPNIVTYNIL 647

Query: 472 INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQA 511
           ++CL ++G    A  L+ ++  QG  P+ +TY ++  LQ+
Sbjct: 648 LDCLERSGRTAEAVDLYAKLKQQGLTPDSITYAVLERLQS 687


>gi|224136033|ref|XP_002327364.1| predicted protein [Populus trichocarpa]
 gi|222835734|gb|EEE74169.1| predicted protein [Populus trichocarpa]
          Length = 662

 Score =  146 bits (369), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 70/189 (37%), Positives = 113/189 (59%)

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
           + G   D   Y T+   LG+ +Q   ++ L ++M +DG  P+  TYN LI S+GRA  ++
Sbjct: 446 EKGVSVDTVMYNTVFSALGKLKQISPLHDLYEKMKQDGPLPDTFTYNILISSFGRAGKVD 505

Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
           EA+ +F++++    +PD  +Y +LI+   K G LD A   +K+M   GL+PD  TYS +I
Sbjct: 506 EAIKIFEELEDSDYKPDTCSYNSLINCLGKNGHLDEAHMKFKEMCEKGLNPDVVTYSTLI 565

Query: 473 NCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFE 532
            C GK   ++ A +LF EM+ +GC PN+VTYNI++    ++     A+ LY  ++  G  
Sbjct: 566 ECFGKTDKVEMACRLFDEMLAEGCYPNIVTYNILLDCLERSGRTAEAVDLYAKLKQQGLI 625

Query: 533 PDKVTYSIV 541
           PD +TYS++
Sbjct: 626 PDSITYSVL 634



 Score =  145 bits (366), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 100/366 (27%), Positives = 169/366 (46%), Gaps = 48/366 (13%)

Query: 325 MDAYQANQVLKQL-QDHTV--ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINK 381
           +D +  N +L  L +D  V  A   F  ++R+   + DE+TYT M+ + G+  +     +
Sbjct: 244 LDIFAFNMLLDALVKDSEVDHAYKVFEDMKRKHC-EPDEYTYTIMIRMTGKIGKPDESLE 302

Query: 382 LLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHA 441
           L ++M+  G  PNV+ YN +I +   A  +++A+ +F +M    C P   TY  ++ + A
Sbjct: 303 LFEEMLNKGYSPNVIAYNTMIQALANARMVDKAILLFLKMVEKECRPSEFTYSVILHLLA 362

Query: 442 ---KAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVN----- 493
              K   LD  +++ KK  +  +      Y+ ++  L K GH   AH+LFC M N     
Sbjct: 363 TERKLHKLDEVVEVSKKYMSRSI------YAYLVRTLKKLGHASEAHRLFCNMWNCHERG 416

Query: 494 --QGCIPNL----------------------------VTYNIMIALQAKARNYQSALKLY 523
               C+  L                            V YN + +   K +       LY
Sbjct: 417 DRDACVSMLECLCSAGKTTEAIDLLGKIHEKGVSVDTVMYNTVFSALGKLKQISPLHDLY 476

Query: 524 RDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKA 583
             M+  G  PD  TY+I++   G  G +DEA  +F E+   ++ PD   Y  L++  GK 
Sbjct: 477 EKMKQDGPLPDTFTYNILISSFGRAGKVDEAIKIFEELEDSDYKPDTCSYNSLINCLGKN 536

Query: 584 GNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTY 643
           G++ +A   ++ M + GL P+V T ++L+  F +  ++  A  L   ML  G  P++ TY
Sbjct: 537 GHLDEAHMKFKEMCEKGLNPDVVTYSTLIECFGKTDKVEMACRLFDEMLAEGCYPNIVTY 596

Query: 644 TLLLSC 649
            +LL C
Sbjct: 597 NILLDC 602



 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 91/325 (28%), Positives = 157/325 (48%), Gaps = 34/325 (10%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIH---SYGRANYL 411
           G+  +   Y TM+  L  AR       L  +MV   C+P+  TY+ ++H   +  + + L
Sbjct: 311 GYSPNVIAYNTMIQALANARMVDKAILLFLKMVEKECRPSEFTYSVILHLLATERKLHKL 370

Query: 412 NEALDVFKQ-------------MQVVG--CEPDRVTYCTLIDIHAK-------------- 442
           +E ++V K+             ++ +G   E  R+ +C + + H +              
Sbjct: 371 DEVVEVSKKYMSRSIYAYLVRTLKKLGHASEAHRL-FCNMWNCHERGDRDACVSMLECLC 429

Query: 443 -AGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLV 501
            AG    A+D+  K+   G+S DT  Y+ + + LGK   +   H L+ +M   G +P+  
Sbjct: 430 SAGKTTEAIDLLGKIHEKGVSVDTVMYNTVFSALGKLKQISPLHDLYEKMKQDGPLPDTF 489

Query: 502 TYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEM 561
           TYNI+I+   +A     A+K++ +++++ ++PD  +Y+ ++  LG  G+LDEA   F EM
Sbjct: 490 TYNILISSFGRAGKVDEAIKIFEELEDSDYKPDTCSYNSLINCLGKNGHLDEAHMKFKEM 549

Query: 562 RRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQL 621
             K   PD   Y  L++ +GK   V  A   ++ ML  G  PN+ T N LL    R G+ 
Sbjct: 550 CEKGLNPDVVTYSTLIECFGKTDKVEMACRLFDEMLAEGCYPNIVTYNILLDCLERSGRT 609

Query: 622 SDAYHLLQGMLNLGLKPSLQTYTLL 646
           ++A  L   +   GL P   TY++L
Sbjct: 610 AEAVDLYAKLKQQGLIPDSITYSVL 634



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 71/231 (30%), Positives = 126/231 (54%), Gaps = 2/231 (0%)

Query: 359 DEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVF 418
           D     +M+  L  A +      LL ++   G   + V YN +  + G+   ++   D++
Sbjct: 417 DRDACVSMLECLCSAGKTTEAIDLLGKIHEKGVSVDTVMYNTVFSALGKLKQISPLHDLY 476

Query: 419 KQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKA 478
           ++M+  G  PD  TY  LI    +AG +D A+ ++++++ +   PDT +Y+ +INCLGK 
Sbjct: 477 EKMKQDGPLPDTFTYNILISSFGRAGKVDEAIKIFEELEDSDYKPDTCSYNSLINCLGKN 536

Query: 479 GHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTY 538
           GHL  AH  F EM  +G  P++VTY+ +I    K    + A +L+ +M   G  P+ VTY
Sbjct: 537 GHLDEAHMKFKEMCEKGLNPDVVTYSTLIECFGKTDKVEMACRLFDEMLAEGCYPNIVTY 596

Query: 539 SIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKA 589
           +I+++ L   G   EA  ++A+++++  +PD   Y +L  L  ++G+ RK 
Sbjct: 597 NILLDCLERSGRTAEAVDLYAKLKQQGLIPDSITYSVLARL--QSGSHRKV 645



 Score =  120 bits (301), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 108/467 (23%), Positives = 198/467 (42%), Gaps = 43/467 (9%)

Query: 318 LGNTNYSMDAYQANQVLKQLQDHTVALGFFNWL-RRQAGFKHDEHTYTTMVGILGRAR-- 374
           L   + S+   +A+++LK L   ++AL FF++       F HD  TY+ ++ IL ++   
Sbjct: 98  LSALSISLTPNEASEILKSLNSPSLALRFFHFCPSLSPNFHHDCFTYSRIILILSKSNLP 157

Query: 375 -QFGAINKLLDQMVRDGCQPNV--------------------------------VTYNRL 401
            +F     ++ +M R+G + ++                                 TY  L
Sbjct: 158 DRFHLARSIVSEMERNGVRGSISTVNILIGFYENSEDLQKCIGLIKKWGLRMTGYTYKCL 217

Query: 402 IHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGL 461
           + +Y R+    +   V+ +M+  G   D   +  L+D   K   +D A  +++ M+    
Sbjct: 218 VQAYLRSRNTEKGFAVYLEMKKKGHMLDIFAFNMLLDALVKDSEVDHAYKVFEDMKRKHC 277

Query: 462 SPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALK 521
            PD +TY+++I   GK G    + +LF EM+N+G  PN++ YN MI   A AR    A+ 
Sbjct: 278 EPDEYTYTIMIRMTGKIGKPDESLELFEEMLNKGYSPNVIAYNTMIQALANARMVDKAIL 337

Query: 522 LYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWG 581
           L+  M      P + TYS+++ +L     L + + V  E+ +K       +Y  LV    
Sbjct: 338 LFLKMVEKECRPSEFTYSVILHLLATERKLHKLDEV-VEVSKKYM--SRSIYAYLVRTLK 394

Query: 582 KAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQ 641
           K G+  +A   +  M     R +   C S+L      G+ ++A  LL  +   G+     
Sbjct: 395 KLGHASEAHRLFCNMWNCHERGDRDACVSMLECLCSAGKTTEAIDLLGKIHEKGVSVDTV 454

Query: 642 TYTLLLSCCTEARSPYDMGFCHELMAVSGHPAHMFL--LSMPSPGPDGQNVRDHVGSFLE 699
            Y  + S   + +    +   +E M   G     F   + + S G  G+   D      E
Sbjct: 455 MYNTVFSALGKLKQISPLHDLYEKMKQDGPLPDTFTYNILISSFGRAGK--VDEAIKIFE 512

Query: 700 MMHSEDRESKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAV 746
            +   D +      +++++ L K+G  +EA   ++   +K + PD V
Sbjct: 513 ELEDSDYKPDTCSYNSLINCLGKNGHLDEAHMKFKEMCEKGLNPDVV 559



 Score =  103 bits (257), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 51/160 (31%), Positives = 91/160 (56%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           +Q G   D  TY  ++   GRA +     K+ +++     +P+  +YN LI+  G+  +L
Sbjct: 480 KQDGPLPDTFTYNILISSFGRAGKVDEAIKIFEELEDSDYKPDTCSYNSLINCLGKNGHL 539

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
           +EA   FK+M   G  PD VTY TLI+   K   +++A  ++ +M A G  P+  TY+++
Sbjct: 540 DEAHMKFKEMCEKGLNPDVVTYSTLIECFGKTDKVEMACRLFDEMLAEGCYPNIVTYNIL 599

Query: 472 INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQA 511
           ++CL ++G    A  L+ ++  QG IP+ +TY+++  LQ+
Sbjct: 600 LDCLERSGRTAEAVDLYAKLKQQGLIPDSITYSVLARLQS 639


>gi|357138821|ref|XP_003570985.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g35130-like [Brachypodium distachyon]
          Length = 613

 Score =  146 bits (369), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 113/411 (27%), Positives = 184/411 (44%), Gaps = 22/411 (5%)

Query: 348 NWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGR 407
            W+  ++ F+ D   Y  ++   GR RQ      +   ++   C P   TY  L+ +Y  
Sbjct: 175 EWIVYRSSFRPDIICYNLLIDAYGRKRQLNKAESIYAAVLEAQCVPTEDTYALLLRAYCN 234

Query: 408 ANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFT 467
           A  L+ A  V  +MQ  G  P    Y   +D   KA     A+++Y++M+      +T T
Sbjct: 235 ARSLHRAEGVISEMQEHGIPPSATVYNAYLDGLLKARCTVKAVEVYQRMKKERCRTNTET 294

Query: 468 YSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQ 527
           Y+++IN  GK+    +A ++F EM + GC  N+ TY  ++   A+    + A +++  MQ
Sbjct: 295 YTLMINVYGKSKQPMSAMKIFNEMQSIGCKANICTYTALVNAFAREGLCEKAEEVFEQMQ 354

Query: 528 NAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVR 587
            AG EPD   Y+ +ME     G+   A  +F+ M+     PD   Y +LVD +G+AG  R
Sbjct: 355 QAGHEPDVYAYNALMEAYSRAGFPQGASEIFSLMQHMGCEPDRASYNILVDAYGRAGLHR 414

Query: 588 KAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
           +A   +E++ Q G+ P + +   LLSA  R G +     ++  +   GL+P       +L
Sbjct: 415 EAEATFESLKQQGMAPTMKSHMLLLSAHARSGNVGRCEQVMAQLHKSGLRPDTFALNAML 474

Query: 648 SCCTEARSPYDMGFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHV-GSFLEMMHS--- 703
                A    DM     L+A       M L      G     V  +    +L  M +   
Sbjct: 475 HAYARAGRLDDM---ERLLAA------MDLAGSADVGSHNVAVNAYARAGYLGRMEAAFE 525

Query: 704 --EDRESKRGLVDA-VVDFLHKSG---LKEEAG---SVWEVAAQKNVYPDA 745
               R+ K+G +DA VV +  + G    K+E G    ++E       YPDA
Sbjct: 526 GIRRRKGKKGGIDADVVSWTSRMGGYARKKEYGKCLEIFEEMVDAGCYPDA 576



 Score = 79.7 bits (195), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 64/296 (21%), Positives = 116/296 (39%), Gaps = 75/296 (25%)

Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLI 402
           A+  FN ++   G K +  TYT +V    R        ++ +QM + G +P+V  YN L+
Sbjct: 311 AMKIFNEMQ-SIGCKANICTYTALVNAFAREGLCEKAEEVFEQMQQAGHEPDVYAYNALM 369

Query: 403 HSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYK-------- 454
            +Y RA +   A ++F  MQ +GCEPDR +Y  L+D + +AG    A   ++        
Sbjct: 370 EAYSRAGFPQGASEIFSLMQHMGCEPDRASYNILVDAYGRAGLHREAEATFESLKQQGMA 429

Query: 455 ---------------------------KMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQL 487
                                      ++  +GL PDTF  + +++   +AG L    +L
Sbjct: 430 PTMKSHMLLLSAHARSGNVGRCEQVMAQLHKSGLRPDTFALNAMLHAYARAGRLDDMERL 489

Query: 488 FCEM--------------VNQ-------------------------GCIPNLVTYNIMIA 508
              M              VN                          G   ++V++   + 
Sbjct: 490 LAAMDLAGSADVGSHNVAVNAYARAGYLGRMEAAFEGIRRRKGKKGGIDADVVSWTSRMG 549

Query: 509 LQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRK 564
             A+ + Y   L+++ +M +AG  PD  T  ++M        +++  A+   M ++
Sbjct: 550 GYARKKEYGKCLEIFEEMVDAGCYPDAGTAKVLMAACSDERQVEQVAAIVRSMHKE 605


>gi|297797449|ref|XP_002866609.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297312444|gb|EFH42868.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 724

 Score =  146 bits (368), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 88/285 (30%), Positives = 147/285 (51%)

Query: 364 TTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQV 423
           T + G +   R   A   L D +   G  P+V TYN LI+ Y +   +  AL+V + M+ 
Sbjct: 352 TLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKKGLVGLALEVLRDMRN 411

Query: 424 VGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQA 483
            GC+P+  +Y  L+D   K G +D A ++  +M A GL P+T  ++ +I+   K   +  
Sbjct: 412 KGCKPNVYSYTILVDGFCKLGKIDEAYNLLNEMSADGLKPNTVGFNCLISAFCKEHRIPE 471

Query: 484 AHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVME 543
           A ++F EM  +GC P++ T+N +I+   +    + AL L RDM + G   + VTY+ ++ 
Sbjct: 472 AVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLIN 531

Query: 544 VLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRP 603
                G + EA  +  EM  +  + DE  Y  L+    +AG V KA   +E ML+ GL P
Sbjct: 532 AFLRRGEIKEARKLVNEMVFQGSLLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGLVP 591

Query: 604 NVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
           +  +CN L++   R G + +A    + M+  G  P + T+  L++
Sbjct: 592 SSISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLIN 636



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 81/304 (26%), Positives = 156/304 (51%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           G   D  TY +++    +    G   ++L  M   GC+PNV +Y  L+  + +   ++EA
Sbjct: 378 GIVPDVCTYNSLIYGYWKKGLVGLALEVLRDMRNKGCKPNVYSYTILVDGFCKLGKIDEA 437

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
            ++  +M   G +P+ V +  LI    K   +  A++++++M   G  PD +T++ +I+ 
Sbjct: 438 YNLLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISG 497

Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPD 534
           L +   ++ A  L  +M+++G + N VTYN +I    +    + A KL  +M   G   D
Sbjct: 498 LCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSLLD 557

Query: 535 KVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYE 594
           ++TY+ +++ L   G +D+A ++F +M R   VP      +L++   ++G V +A E+ +
Sbjct: 558 EITYNSLIKGLCRAGEVDKARSLFEKMLRDGLVPSSISCNILINGLCRSGMVEEAVEFQK 617

Query: 595 AMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEAR 654
            M+  G  P++ T NSL++   R G++ D   + + +   G+ P   TY  L+S   +  
Sbjct: 618 EMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTYNTLMSWLCKGG 677

Query: 655 SPYD 658
             YD
Sbjct: 678 FVYD 681



 Score =  136 bits (343), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 91/371 (24%), Positives = 171/371 (46%), Gaps = 37/371 (9%)

Query: 312 PLAEEALGNTNYSMDAYQANQVLKQLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILG 371
           P   ++L N+ + +  +Q  ++L+   D + ++  F+W   Q G++H    Y  ++G LG
Sbjct: 57  PFDLDSLRNSFHKITPFQLCKLLELPLDVSTSMELFSWTGSQKGYRHSFDVYQVLIGKLG 116

Query: 372 RARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQ-VVGCEPDR 430
              +F  I++LL QM  +G       +  ++  Y +A +  +   +  +M+ V  CEP  
Sbjct: 117 SNGEFKTIDRLLMQMKDEGIVFKESLFISIMRDYDKAGFPGQTTRLMLEMRNVYSCEPTF 176

Query: 431 VTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCE 490
            +Y  +++I        VA +++  M +  + P  FT+ V++  L     + +A  +  +
Sbjct: 177 KSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKALCAVNEVDSALSVLRD 236

Query: 491 MVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGY 550
           M   GC+PN V Y  +I   +K      AL+L  +M   G  PD  T++ V  +LG C +
Sbjct: 237 MTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDV--ILGLCKF 294

Query: 551 --LDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWY--------------- 593
             ++EA  +   M  + + PD+  YG L++   K G V  A + +               
Sbjct: 295 DRINEAAKMVNRMLIRGFTPDDITYGYLMNGLCKIGRVDAAKDLFYRIPKPTSVIFNTLI 354

Query: 594 -----------------EAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGL 636
                            + +   G+ P+V T NSL+  + + G +  A  +L+ M N G 
Sbjct: 355 HGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKKGLVGLALEVLRDMRNKGC 414

Query: 637 KPSLQTYTLLL 647
           KP++ +YT+L+
Sbjct: 415 KPNVYSYTILV 425



 Score =  136 bits (343), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 97/342 (28%), Positives = 160/342 (46%), Gaps = 35/342 (10%)

Query: 340 HTVALG-FFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTY 398
           H VA   F++ L R+        T+  ++  L    +  +   +L  M + GC PN V Y
Sbjct: 192 HKVAANVFYDMLSRK--IPPTLFTFGVVMKALCAVNEVDSALSVLRDMTKHGCVPNSVIY 249

Query: 399 NRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQA 458
             LIHS  + N +NEAL + ++M ++GC PD  T+  +I    K   ++ A  M  +M  
Sbjct: 250 QTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLI 309

Query: 459 AGLSPDTFTYSVIINCLGKAGHLQAAHQLF------------------------------ 488
            G +PD  TY  ++N L K G + AA  LF                              
Sbjct: 310 RGFTPDDITYGYLMNGLCKIGRVDAAKDLFYRIPKPTSVIFNTLIHGFVTHGRLDDAKAV 369

Query: 489 -CEMVNQ-GCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLG 546
             +MV   G +P++ TYN +I    K      AL++ RDM+N G +P+  +Y+I+++   
Sbjct: 370 LSDMVTSYGIVPDVCTYNSLIYGYWKKGLVGLALEVLRDMRNKGCKPNVYSYTILVDGFC 429

Query: 547 HCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVP 606
             G +DEA  +  EM      P+   +  L+  + K   + +A E +  M + G +P+V 
Sbjct: 430 KLGKIDEAYNLLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVY 489

Query: 607 TCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
           T NSL+S    V ++  A  LL+ M++ G+  +  TY  L++
Sbjct: 490 TFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLIN 531



 Score =  136 bits (342), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 82/296 (27%), Positives = 152/296 (51%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           R  G K + ++YT +V    +  +      LL++M  DG +PN V +N LI ++ + + +
Sbjct: 410 RNKGCKPNVYSYTILVDGFCKLGKIDEAYNLLNEMSADGLKPNTVGFNCLISAFCKEHRI 469

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
            EA+++F++M   GC+PD  T+ +LI    +   +  A+ + + M + G+  +T TY+ +
Sbjct: 470 PEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTL 529

Query: 472 INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF 531
           IN   + G ++ A +L  EMV QG + + +TYN +I    +A     A  L+  M   G 
Sbjct: 530 INAFLRRGEIKEARKLVNEMVFQGSLLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGL 589

Query: 532 EPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWE 591
            P  ++ +I++  L   G ++EA     EM  +   PD   +  L++   +AG +     
Sbjct: 590 VPSSISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLT 649

Query: 592 WYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
            +  +   G+ P+  T N+L+S   + G + DA  LL   +  G  P+ +T+++LL
Sbjct: 650 MFRKLQAEGIPPDTVTYNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNDRTWSILL 705



 Score =  102 bits (254), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 66/262 (25%), Positives = 125/262 (47%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           G K +   +  ++    +  +     ++  +M R GC+P+V T+N LI      + +  A
Sbjct: 448 GLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHA 507

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
           L + + M   G   + VTY TLI+   + G +  A  +  +M   G   D  TY+ +I  
Sbjct: 508 LWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSLLDEITYNSLIKG 567

Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPD 534
           L +AG +  A  LF +M+  G +P+ ++ NI+I    ++   + A++  ++M   G  PD
Sbjct: 568 LCRAGEVDKARSLFEKMLRDGLVPSSISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPD 627

Query: 535 KVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYE 594
            VT++ ++  L   G +++   +F +++ +   PD   Y  L+    K G V  A    +
Sbjct: 628 IVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTYNTLMSWLCKGGFVYDACLLLD 687

Query: 595 AMLQAGLRPNVPTCNSLLSAFL 616
             ++ G  PN  T + LL + +
Sbjct: 688 EGIEDGFVPNDRTWSILLQSLV 709



 Score = 73.2 bits (178), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 47/198 (23%), Positives = 88/198 (44%), Gaps = 1/198 (0%)

Query: 452 MYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVN-QGCIPNLVTYNIMIALQ 510
           +  +M+  G+      +  I+    KAG      +L  EM N   C P   +YN+++ + 
Sbjct: 127 LLMQMKDEGIVFKESLFISIMRDYDKAGFPGQTTRLMLEMRNVYSCEPTFKSYNVVLEIL 186

Query: 511 AKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDE 570
                ++ A  ++ DM +    P   T+ +VM+ L     +D A +V  +M +   VP+ 
Sbjct: 187 VSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKALCAVNEVDSALSVLRDMTKHGCVPNS 246

Query: 571 PVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQG 630
            +Y  L+    K   V +A +  E M   G  P+  T N ++    +  ++++A  ++  
Sbjct: 247 VIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNR 306

Query: 631 MLNLGLKPSLQTYTLLLS 648
           ML  G  P   TY  L++
Sbjct: 307 MLIRGFTPDDITYGYLMN 324


>gi|46390363|dbj|BAD15828.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|215697127|dbj|BAG91121.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 554

 Score =  146 bits (368), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 85/298 (28%), Positives = 157/298 (52%), Gaps = 3/298 (1%)

Query: 359 DEHTYTTMV-GILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDV 417
           D +TY T++ G+ GR R   A+  +LD+M+R  C P+VVTY  L+ +  + +   +A+ +
Sbjct: 157 DAYTYNTLIRGLCGRGRTANAL-AVLDEMLRRRCVPDVVTYTILLEATCKRSGYKQAMKL 215

Query: 418 FKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGK 477
             +M+  GC PD VTY  +++   + G +D A++  K + + G  P+T +Y++++  L  
Sbjct: 216 LDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCT 275

Query: 478 AGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVT 537
           A   + A +L  EM  +GC PN+VT+N++I+   +    + AL++   +   G  P+ ++
Sbjct: 276 AERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLS 335

Query: 538 YSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAML 597
           Y+ ++        +D+A A    M  +   PD   Y  L+    ++G V  A E    + 
Sbjct: 336 YNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLK 395

Query: 598 QAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTY-TLLLSCCTEAR 654
             G  P + + N+++    + G+  +A  LL  M++ GL+P + TY T+    C E R
Sbjct: 396 DKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDR 453



 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 88/341 (25%), Positives = 171/341 (50%), Gaps = 9/341 (2%)

Query: 326 DAYQANQVLKQL--QDHTV-ALGFFN-WLRRQAGFKHDEHTYTTMVGILGRARQFGAINK 381
           DAY  N +++ L  +  T  AL   +  LRR+     D  TYT ++    +   +    K
Sbjct: 157 DAYTYNTLIRGLCGRGRTANALAVLDEMLRRRC--VPDVVTYTILLEATCKRSGYKQAMK 214

Query: 382 LLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHA 441
           LLD+M   GC P++VTYN +++   +   +++A++  K +   GCEP+ V+Y  ++    
Sbjct: 215 LLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLC 274

Query: 442 KAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLV 501
            A   + A ++  +M   G  P+  T++++I+ L + G ++ A ++  ++   GC PN +
Sbjct: 275 TAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSL 334

Query: 502 TYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEM 561
           +YN ++    K +    A+     M + G  PD V+Y+ ++  L   G +D A  +  ++
Sbjct: 335 SYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQL 394

Query: 562 RRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQL 621
           + K   P    Y  ++D   KAG  ++A E    M+  GL+P++ T +++ +   R  ++
Sbjct: 395 KDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRI 454

Query: 622 SDAYHLLQGMLNLGLKPSLQTY-TLLLSCCT--EARSPYDM 659
            DA      + ++G++P+   Y  ++L  C   E  S  D+
Sbjct: 455 EDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDL 495



 Score =  128 bits (322), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 88/304 (28%), Positives = 147/304 (48%), Gaps = 5/304 (1%)

Query: 351 RRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSY-GRAN 409
           R  A    D   Y  MV     A Q  A  +L+ +M     +P+  TYN LI    GR  
Sbjct: 117 RVLAACGPDVMAYNAMVAGYCGAGQLDAARRLVAEM---PVEPDAYTYNTLIRGLCGRGR 173

Query: 410 YLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYS 469
             N AL V  +M    C PD VTY  L++   K      AM +  +M+  G +PD  TY+
Sbjct: 174 TAN-ALAVLDEMLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYN 232

Query: 470 VIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNA 529
           V++N + + G +  A +    + + GC PN V+YNI++     A  ++ A +L  +M   
Sbjct: 233 VVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQK 292

Query: 530 GFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKA 589
           G  P+ VT+++++  L   G ++ A  V  ++ +    P+   Y  L+  + K   + KA
Sbjct: 293 GCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKA 352

Query: 590 WEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSC 649
             + + M+  G  P++ + N+LL+A  R G++  A  LL  + + G  P L +Y  ++  
Sbjct: 353 MAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDG 412

Query: 650 CTEA 653
            T+A
Sbjct: 413 LTKA 416



 Score =  125 bits (314), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 76/282 (26%), Positives = 139/282 (49%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           G + +  +Y  ++  L  A ++    +L+ +M + GC PNVVT+N LI    R   +  A
Sbjct: 258 GCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPA 317

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
           L+V +Q+   GC P+ ++Y  L+    K   +D AM     M + G  PD  +Y+ ++  
Sbjct: 318 LEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTA 377

Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPD 534
           L ++G +  A +L  ++ ++GC P L++YN +I    KA   + AL+L  +M + G +PD
Sbjct: 378 LCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPD 437

Query: 535 KVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYE 594
            +TYS +   L     +++A   F +++     P+  +Y  ++    K      A + + 
Sbjct: 438 IITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFA 497

Query: 595 AMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGL 636
            M+  G  PN  T   L+      G + +A  LL  + + G+
Sbjct: 498 YMIGNGCMPNESTYTILIEGLAYEGLIKEARDLLDELCSRGV 539



 Score =  123 bits (308), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 79/276 (28%), Positives = 136/276 (49%), Gaps = 4/276 (1%)

Query: 391 CQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAM 450
           C P+V+ YN ++  Y  A  L+ A  +  +M V   EPD  TY TLI      G    A+
Sbjct: 122 CGPDVMAYNAMVAGYCGAGQLDAARRLVAEMPV---EPDAYTYNTLIRGLCGRGRTANAL 178

Query: 451 DMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQ 510
            +  +M      PD  TY++++    K    + A +L  EM ++GC P++VTYN+++   
Sbjct: 179 AVLDEMLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGI 238

Query: 511 AKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDE 570
            +      A++  +++ + G EP+ V+Y+IV++ L      ++AE +  EM +K   P+ 
Sbjct: 239 CQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNV 298

Query: 571 PVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQG 630
             + +L+    + G V  A E  E + + G  PN  + N LL AF +  ++  A   L  
Sbjct: 299 VTFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDL 358

Query: 631 MLNLGLKPSLQTY-TLLLSCCTEARSPYDMGFCHEL 665
           M++ G  P + +Y TLL + C        +   H+L
Sbjct: 359 MVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQL 394



 Score =  120 bits (301), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 75/297 (25%), Positives = 141/297 (47%), Gaps = 2/297 (0%)

Query: 352 RQAGFKHDEHTYTTMV-GILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANY 410
           R  G   D  TY  +V GI    R   AI + L  +   GC+PN V+YN ++     A  
Sbjct: 220 RDKGCTPDIVTYNVVVNGICQEGRVDDAI-EFLKNLPSYGCEPNTVSYNIVLKGLCTAER 278

Query: 411 LNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSV 470
             +A ++  +M   GC P+ VT+  LI    + G ++ A+++ +++   G +P++ +Y+ 
Sbjct: 279 WEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNP 338

Query: 471 IINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAG 530
           +++   K   +  A      MV++GC P++V+YN ++    ++     A++L   +++ G
Sbjct: 339 LLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKG 398

Query: 531 FEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAW 590
             P  ++Y+ V++ L   G   EA  +  EM  K   PD   Y  +     +   +  A 
Sbjct: 399 CAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAI 458

Query: 591 EWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
             +  +   G+RPN    N+++    +  +   A  L   M+  G  P+  TYT+L+
Sbjct: 459 RAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILI 515



 Score = 66.6 bits (161), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 37/136 (27%), Positives = 72/136 (52%)

Query: 362 TYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQM 421
           +Y T++  L +A +     +LL++MV  G QP+++TY+ +     R + + +A+  F ++
Sbjct: 405 SYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKV 464

Query: 422 QVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHL 481
           Q +G  P+ V Y  +I    K      A+D++  M   G  P+  TY+++I  L   G +
Sbjct: 465 QDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGLAYEGLI 524

Query: 482 QAAHQLFCEMVNQGCI 497
           + A  L  E+ ++G +
Sbjct: 525 KEARDLLDELCSRGVV 540


>gi|326528911|dbj|BAJ97477.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 913

 Score =  146 bits (368), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 83/317 (26%), Positives = 158/317 (49%)

Query: 354 AGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNE 413
           +G KH+  TY+ ++        F    ++ ++M++ G QP+   YN LI ++ +   ++ 
Sbjct: 481 SGIKHNNKTYSMLISGFIHLHDFTNAFRIFEEMLKSGLQPDRAIYNLLIEAFCKMGNMDR 540

Query: 414 ALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIIN 473
           A+ + ++MQ    +P    +  +I+  A AG +  A+D+   M+ +G +P   TY+ +I+
Sbjct: 541 AIRILEKMQKERMQPSNRAFRPIIEGFAVAGDMKRALDILDLMRRSGCAPTVMTYNALIH 600

Query: 474 CLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEP 533
            L +   ++ A  +  +M   G  PN  TY I++   A   +   A + +  ++  G + 
Sbjct: 601 GLIRKNQVERAVSVLNKMSIAGITPNEHTYTIIMRGYAATGDIAKAFEYFTKIKEGGLKL 660

Query: 534 DKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWY 593
           D   Y  ++      G +  A AV  EM  +    +  VY +L+D W + G+V +A +  
Sbjct: 661 DVYIYETLLRACCKSGRMQSALAVTREMSSQKIARNTFVYNILIDGWARRGDVWEAADLM 720

Query: 594 EAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEA 653
           + M + G+ PN+ T  S ++A  + G +  A  ++  M ++GLKP+L+TYT L+     A
Sbjct: 721 KQMKEDGVPPNIHTYTSYINACCKAGDMQRAQTVIDEMSDVGLKPNLKTYTTLIKGWARA 780

Query: 654 RSPYDMGFCHELMAVSG 670
             P     C E M ++G
Sbjct: 781 SLPDRALKCFEEMKLAG 797



 Score =  126 bits (316), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 77/271 (28%), Positives = 125/271 (46%), Gaps = 16/271 (5%)

Query: 382 LLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHA 441
           +LD M R GC P V+TYN LIH   R N +  A+ V  +M + G  P+  TY  ++  +A
Sbjct: 579 ILDLMRRSGCAPTVMTYNALIHGLIRKNQVERAVSVLNKMSIAGITPNEHTYTIIMRGYA 638

Query: 442 KAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLV 501
             G +  A + + K++  GL  D + Y  ++    K+G +Q+A  +  EM +Q    N  
Sbjct: 639 ATGDIAKAFEYFTKIKEGGLKLDVYIYETLLRACCKSGRMQSALAVTREMSSQKIARNTF 698

Query: 502 TYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEM 561
            YNI+I   A+  +   A  L + M+  G  P+  TY+  +      G +  A+ V  EM
Sbjct: 699 VYNILIDGWARRGDVWEAADLMKQMKEDGVPPNIHTYTSYINACCKAGDMQRAQTVIDEM 758

Query: 562 RRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQL 621
                 P+   Y  L+  W +A    +A + +E M  AGL+P+    + L+++ L    +
Sbjct: 759 SDVGLKPNLKTYTTLIKGWARASLPDRALKCFEEMKLAGLKPDEAAYHCLVTSLLSRATV 818

Query: 622 SDAYHLLQGMLNLGLKPSLQTYTLLLSCCTE 652
            +                  TYT +LS C E
Sbjct: 819 MEG----------------STYTGILSVCRE 833



 Score =  119 bits (298), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 72/331 (21%), Positives = 154/331 (46%), Gaps = 35/331 (10%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           R  G + +   +T++V     AR         ++M  +G +  +VTY+ LI  +G+ N  
Sbjct: 304 RARGIEPNAFVFTSLVHAYAVARDMRGALSCTEEMKAEGIELTIVTYSILISGFGKINDT 363

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGL---------- 461
             A ++FK+ +    + + + Y  +I  H ++G +D A ++  +M+  G+          
Sbjct: 364 QSADNLFKEAKTNLGDLNGIIYSNIIHAHCQSGNMDRAEELVHEMEEDGIDAPIDAYHSM 423

Query: 462 -------------------------SPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGC 496
                                    +P   +Y  +IN   K G +  A  +  EM + G 
Sbjct: 424 MHGYTIIQDEKKCLIVFERLKECCFTPSIISYGCLINLYVKIGKVAKAIAISKEMESSGI 483

Query: 497 IPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEA 556
             N  TY+++I+      ++ +A +++ +M  +G +PD+  Y++++E     G +D A  
Sbjct: 484 KHNNKTYSMLISGFIHLHDFTNAFRIFEEMLKSGLQPDRAIYNLLIEAFCKMGNMDRAIR 543

Query: 557 VFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFL 616
           +  +M+++   P    +  +++ +  AG++++A +  + M ++G  P V T N+L+   +
Sbjct: 544 ILEKMQKERMQPSNRAFRPIIEGFAVAGDMKRALDILDLMRRSGCAPTVMTYNALIHGLI 603

Query: 617 RVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
           R  Q+  A  +L  M   G+ P+  TYT+++
Sbjct: 604 RKNQVERAVSVLNKMSIAGITPNEHTYTIIM 634



 Score =  110 bits (274), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 69/287 (24%), Positives = 128/287 (44%), Gaps = 1/287 (0%)

Query: 380 NKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDI 439
            +L+ +M  DG    +  Y+ ++H Y       + L VF++++     P  ++Y  LI++
Sbjct: 402 EELVHEMEEDGIDAPIDAYHSMMHGYTIIQDEKKCLIVFERLKECCFTPSIISYGCLINL 461

Query: 440 HAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPN 499
           + K G +  A+ + K+M+++G+  +  TYS++I+          A ++F EM+  G  P+
Sbjct: 462 YVKIGKVAKAIAISKEMESSGIKHNNKTYSMLISGFIHLHDFTNAFRIFEEMLKSGLQPD 521

Query: 500 LVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFA 559
              YN++I    K  N   A+++   MQ    +P    +  ++E     G +  A  +  
Sbjct: 522 RAIYNLLIEAFCKMGNMDRAIRILEKMQKERMQPSNRAFRPIIEGFAVAGDMKRALDILD 581

Query: 560 EMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVG 619
            MRR    P    Y  L+    +   V +A      M  AG+ PN  T   ++  +   G
Sbjct: 582 LMRRSGCAPTVMTYNALIHGLIRKNQVERAVSVLNKMSIAGITPNEHTYTIIMRGYAATG 641

Query: 620 QLSDAYHLLQGMLNLGLKPSLQTY-TLLLSCCTEARSPYDMGFCHEL 665
            ++ A+     +   GLK  +  Y TLL +CC   R    +    E+
Sbjct: 642 DIAKAFEYFTKIKEGGLKLDVYIYETLLRACCKSGRMQSALAVTREM 688



 Score =  101 bits (251), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 68/259 (26%), Positives = 124/259 (47%), Gaps = 4/259 (1%)

Query: 392 QPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMD 451
           +P+   +  +I  Y +    + A   F+ M+  G EP+   + +L+  +A A  +  A+ 
Sbjct: 274 KPSRREFGLMIVYYAKRGDKHHARATFENMRARGIEPNAFVFTSLVHAYAVARDMRGALS 333

Query: 452 MYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQA 511
             ++M+A G+     TYS++I+  GK    Q+A  LF E        N + Y+ +I    
Sbjct: 334 CTEEMKAEGIELTIVTYSILISGFGKINDTQSADNLFKEAKTNLGDLNGIIYSNIIHAHC 393

Query: 512 KARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEA--VFAEMRRKNWVPD 569
           ++ N   A +L  +M+  G +     Y  +M   G+    DE +   VF  ++   + P 
Sbjct: 394 QSGNMDRAEELVHEMEEDGIDAPIDAYHSMMH--GYTIIQDEKKCLIVFERLKECCFTPS 451

Query: 570 EPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQ 629
              YG L++L+ K G V KA    + M  +G++ N  T + L+S F+ +   ++A+ + +
Sbjct: 452 IISYGCLINLYVKIGKVAKAIAISKEMESSGIKHNNKTYSMLISGFIHLHDFTNAFRIFE 511

Query: 630 GMLNLGLKPSLQTYTLLLS 648
            ML  GL+P    Y LL+ 
Sbjct: 512 EMLKSGLQPDRAIYNLLIE 530



 Score = 95.1 bits (235), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 61/261 (23%), Positives = 121/261 (46%)

Query: 383 LDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAK 442
            + M   G +PN   +  L+H+Y  A  +  AL   ++M+  G E   VTY  LI    K
Sbjct: 300 FENMRARGIEPNAFVFTSLVHAYAVARDMRGALSCTEEMKAEGIELTIVTYSILISGFGK 359

Query: 443 AGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVT 502
                 A +++K+ +      +   YS II+   ++G++  A +L  EM   G    +  
Sbjct: 360 INDTQSADNLFKEAKTNLGDLNGIIYSNIIHAHCQSGNMDRAEELVHEMEEDGIDAPIDA 419

Query: 503 YNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMR 562
           Y+ M+      ++ +  L ++  ++   F P  ++Y  ++ +    G + +A A+  EM 
Sbjct: 420 YHSMMHGYTIIQDEKKCLIVFERLKECCFTPSIISYGCLINLYVKIGKVAKAIAISKEME 479

Query: 563 RKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLS 622
                 +   Y +L+  +    +   A+  +E ML++GL+P+    N L+ AF ++G + 
Sbjct: 480 SSGIKHNNKTYSMLISGFIHLHDFTNAFRIFEEMLKSGLQPDRAIYNLLIEAFCKMGNMD 539

Query: 623 DAYHLLQGMLNLGLKPSLQTY 643
            A  +L+ M    ++PS + +
Sbjct: 540 RAIRILEKMQKERMQPSNRAF 560


>gi|255547043|ref|XP_002514579.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223546183|gb|EEF47685.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 840

 Score =  146 bits (368), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 97/335 (28%), Positives = 166/335 (49%), Gaps = 2/335 (0%)

Query: 342 VALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRL 401
           VA  FF  + +  G   D ++Y  ++  L  A   G    L + M   G +P++VTYN L
Sbjct: 299 VAKSFFCMMLKH-GLLPDAYSYNILIHGLCIAGSMGEALDLKNDMENHGLEPDMVTYNIL 357

Query: 402 IHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGL 461
              +     +N A ++ ++M + G  P+ VTY  LI  H + G ++ A+ +YK+M + G 
Sbjct: 358 AKGFRLLGLINGAWNIIQKMLIKGPNPNLVTYTVLICGHCQIGNVEEALKLYKEMISHGF 417

Query: 462 SPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALK 521
                + +V++  L K+  +  A +LFCEM   G  P+L+TY+ +I    K    Q A+ 
Sbjct: 418 QLSIISSTVLLGSLCKSRQVDVAFKLFCEMEANGLRPDLITYSTLIHGLCKQGEVQQAIL 477

Query: 522 LYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWG 581
           LY  M +    P+ + +  ++  L   G + +A   F  +   N   D  +Y +++D + 
Sbjct: 478 LYEKMCSNRIIPNSLIHGAILMGLCEKGKISQARMYFDYLITSNLSLDIILYNIMIDGYI 537

Query: 582 KAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQ 641
           K GN R+A + Y+ + + G+ P + T NSL+  F    +LS A  LL  +   GL+P+  
Sbjct: 538 KRGNTREAVKLYKQLGEKGISPTIVTFNSLMYGFCINRKLSQARRLLDTIKLHGLEPNAV 597

Query: 642 TYTLLLSC-CTEARSPYDMGFCHELMAVSGHPAHM 675
           TYT L++  C E      +    E+ A +  P H+
Sbjct: 598 TYTTLMNVYCEEGNMQSLLELLSEMKAKAIGPTHI 632



 Score =  121 bits (304), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 82/320 (25%), Positives = 161/320 (50%), Gaps = 10/320 (3%)

Query: 346 FFNWLRRQAGFKHDEHTYTTMV-GILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHS 404
           +F++L   +    D   Y  M+ G + R     A+ KL  Q+   G  P +VT+N L++ 
Sbjct: 513 YFDYLI-TSNLSLDIILYNIMIDGYIKRGNTREAV-KLYKQLGEKGISPTIVTFNSLMYG 570

Query: 405 YGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPD 464
           +     L++A  +   +++ G EP+ VTY TL++++ + G +   +++  +M+A  + P 
Sbjct: 571 FCINRKLSQARRLLDTIKLHGLEPNAVTYTTLMNVYCEEGNMQSLLELLSEMKAKAIGPT 630

Query: 465 TFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYR 524
             TY+V+I  L K   LQ + QL  +M   G  P+ V+YN +I    KAR+ + A +LY 
Sbjct: 631 HITYTVVIKGLCKQWKLQESCQLLEDMDAVGLTPDQVSYNTIIQAFCKARDMRKAFQLYD 690

Query: 525 DMQNAGFEPDKVTYSIVMEVLGHCGY--LDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGK 582
            M     EP  VTY+I++   G C Y  L +A+ +   ++ +    ++  Y  ++     
Sbjct: 691 KMLLHNLEPTSVTYNILIN--GFCVYGDLKDADNLLVSLQNRKVNLNKYAYTTIIKAHCA 748

Query: 583 AGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQT 642
            G+V KA  ++  M++ G   ++   ++++    +   +++A +    ML+ G+ P    
Sbjct: 749 KGDVDKAVVYFRQMVEKGFEVSIRDYSAVIGRLCKRCLVTEAKYFFCMMLSDGVCPDQDL 808

Query: 643 YTLLLSC---CTEARSPYDM 659
           + +LL+    C    S +++
Sbjct: 809 FEVLLNAFHQCGHLNSEFEL 828



 Score =  117 bits (293), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 83/330 (25%), Positives = 150/330 (45%), Gaps = 1/330 (0%)

Query: 318 LGNTNYSMDAYQANQVLKQLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFG 377
           + + N+ +     N +L  L+   +    +N ++  +G    E+T + +V  L R  +F 
Sbjct: 205 MKDLNFIVSIQTYNSLLYNLRHSNIMWDVYNEIKV-SGTPQSEYTSSIVVDGLCRQSRFQ 263

Query: 378 AINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLI 437
                         QP+VV++N ++  Y +  +++ A   F  M   G  PD  +Y  LI
Sbjct: 264 DAVLFFQDTEGKEFQPSVVSFNTIMSRYCKLGFVDVAKSFFCMMLKHGLLPDAYSYNILI 323

Query: 438 DIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCI 497
                AG +  A+D+   M+  GL PD  TY+++       G +  A  +  +M+ +G  
Sbjct: 324 HGLCIAGSMGEALDLKNDMENHGLEPDMVTYNILAKGFRLLGLINGAWNIIQKMLIKGPN 383

Query: 498 PNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAV 557
           PNLVTY ++I    +  N + ALKLY++M + GF+   ++ ++++  L     +D A  +
Sbjct: 384 PNLVTYTVLICGHCQIGNVEEALKLYKEMISHGFQLSIISSTVLLGSLCKSRQVDVAFKL 443

Query: 558 FAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLR 617
           F EM      PD   Y  L+    K G V++A   YE M    + PN     ++L     
Sbjct: 444 FCEMEANGLRPDLITYSTLIHGLCKQGEVQQAILLYEKMCSNRIIPNSLIHGAILMGLCE 503

Query: 618 VGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
            G++S A      ++   L   +  Y +++
Sbjct: 504 KGKISQARMYFDYLITSNLSLDIILYNIMI 533



 Score =  114 bits (285), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 84/328 (25%), Positives = 153/328 (46%), Gaps = 35/328 (10%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           GF+    + T ++G L ++RQ     KL  +M  +G +P+++TY+ LIH   +   + +A
Sbjct: 416 GFQLSIISSTVLLGSLCKSRQVDVAFKLFCEMEANGLRPDLITYSTLIHGLCKQGEVQQA 475

Query: 415 LDVFKQM--------------QVVG-CEP--------------------DRVTYCTLIDI 439
           + ++++M               ++G CE                     D + Y  +ID 
Sbjct: 476 ILLYEKMCSNRIIPNSLIHGAILMGLCEKGKISQARMYFDYLITSNLSLDIILYNIMIDG 535

Query: 440 HAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPN 499
           + K G    A+ +YK++   G+SP   T++ ++        L  A +L   +   G  PN
Sbjct: 536 YIKRGNTREAVKLYKQLGEKGISPTIVTFNSLMYGFCINRKLSQARRLLDTIKLHGLEPN 595

Query: 500 LVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFA 559
            VTY  ++ +  +  N QS L+L  +M+     P  +TY++V++ L     L E+  +  
Sbjct: 596 AVTYTTLMNVYCEEGNMQSLLELLSEMKAKAIGPTHITYTVVIKGLCKQWKLQESCQLLE 655

Query: 560 EMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVG 619
           +M      PD+  Y  ++  + KA ++RKA++ Y+ ML   L P   T N L++ F   G
Sbjct: 656 DMDAVGLTPDQVSYNTIIQAFCKARDMRKAFQLYDKMLLHNLEPTSVTYNILINGFCVYG 715

Query: 620 QLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
            L DA +LL  + N  +  +   YT ++
Sbjct: 716 DLKDADNLLVSLQNRKVNLNKYAYTTII 743



 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 74/264 (28%), Positives = 123/264 (46%), Gaps = 4/264 (1%)

Query: 374 RQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTY 433
           R+     +LLD +   G +PN VTY  L++ Y     +   L++  +M+     P  +TY
Sbjct: 575 RKLSQARRLLDTIKLHGLEPNAVTYTTLMNVYCEEGNMQSLLELLSEMKAKAIGPTHITY 634

Query: 434 CTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVN 493
             +I    K   L  +  + + M A GL+PD  +Y+ II    KA  ++ A QL+ +M+ 
Sbjct: 635 TVVIKGLCKQWKLQESCQLLEDMDAVGLTPDQVSYNTIIQAFCKARDMRKAFQLYDKMLL 694

Query: 494 QGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHC--GYL 551
               P  VTYNI+I       + + A  L   +QN     +K  Y+ +++   HC  G +
Sbjct: 695 HNLEPTSVTYNILINGFCVYGDLKDADNLLVSLQNRKVNLNKYAYTTIIK--AHCAKGDV 752

Query: 552 DEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSL 611
           D+A   F +M  K +      Y  ++    K   V +A  ++  ML  G+ P+      L
Sbjct: 753 DKAVVYFRQMVEKGFEVSIRDYSAVIGRLCKRCLVTEAKYFFCMMLSDGVCPDQDLFEVL 812

Query: 612 LSAFLRVGQLSDAYHLLQGMLNLG 635
           L+AF + G L+  + LL  M+  G
Sbjct: 813 LNAFHQCGHLNSEFELLAEMIKSG 836



 Score = 99.4 bits (246), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 107/492 (21%), Positives = 209/492 (42%), Gaps = 39/492 (7%)

Query: 323 YSMDAYQANQVLKQL--QDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAIN 380
           + ++  Q +Q+++ L  +D   A+ F+  L  + GF+H   +   +  +L R ++   + 
Sbjct: 87  FMLNHSQVDQIIEHLNVEDADSAVDFYYLLSNEFGFQHSRFSRLVVSHVLARKKRLNELR 146

Query: 381 KLLDQMVR---DGCQPNV---------------VTYNRLIHSYGRANYLNEALDVFKQMQ 422
            +LDQM+     G  P++               V ++ L  +Y R+  +++AL V  +M+
Sbjct: 147 LVLDQMLLHEGSGSAPSLCELLLGSFRSWDSSNVVWDMLACAYSRSAMVHDALFVLVKMK 206

Query: 423 VVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQ 482
            +       TY +L+         ++  D+Y +++ +G     +T S++++ L +    Q
Sbjct: 207 DLNFIVSIQTYNSLL---YNLRHSNIMWDVYNEIKVSGTPQSEYTSSIVVDGLCRQSRFQ 263

Query: 483 AAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVM 542
            A   F +   +   P++V++N +++   K      A   +  M   G  PD  +Y+I++
Sbjct: 264 DAVLFFQDTEGKEFQPSVVSFNTIMSRYCKLGFVDVAKSFFCMMLKHGLLPDAYSYNILI 323

Query: 543 EVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLR 602
             L   G + EA  +  +M      PD   Y +L   +   G +  AW   + ML  G  
Sbjct: 324 HGLCIAGSMGEALDLKNDMENHGLEPDMVTYNILAKGFRLLGLINGAWNIIQKMLIKGPN 383

Query: 603 PNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMG-- 660
           PN+ T   L+    ++G + +A  L + M++ G + S+ + T+LL    ++R   D+   
Sbjct: 384 PNLVTYTVLICGHCQIGNVEEALKLYKEMISHGFQLSIISSTVLLGSLCKSRQ-VDVAFK 442

Query: 661 -FCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRESKRGLVDAVVDF 719
            FC   M  +G    +   S    G   Q          E M S +R     L+   +  
Sbjct: 443 LFCE--MEANGLRPDLITYSTLIHGLCKQGEVQQAILLYEKMCS-NRIIPNSLIHGAI-- 497

Query: 720 LHKSGLKEEAGSVWEVAAQKNVYPDAVKEKGMSYWLINLHVMSDGTAVIALSRTLAWFRK 779
               GL E+        +Q  +Y D +    +S  +I  ++M DG      +R      K
Sbjct: 498 --LMGLCEKGK-----ISQARMYFDYLITSNLSLDIILYNIMIDGYIKRGNTREAVKLYK 550

Query: 780 QMLISGVGPSRI 791
           Q+   G+ P+ +
Sbjct: 551 QLGEKGISPTIV 562



 Score = 99.0 bits (245), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 64/246 (26%), Positives = 112/246 (45%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
           G + +  TYTT++ +        ++ +LL +M      P  +TY  +I    +   L E+
Sbjct: 591 GLEPNAVTYTTLMNVYCEEGNMQSLLELLSEMKAKAIGPTHITYTVVIKGLCKQWKLQES 650

Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
             + + M  VG  PD+V+Y T+I    KA  +  A  +Y KM    L P + TY+++IN 
Sbjct: 651 CQLLEDMDAVGLTPDQVSYNTIIQAFCKARDMRKAFQLYDKMLLHNLEPTSVTYNILING 710

Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPD 534
               G L+ A  L   + N+    N   Y  +I       +   A+  +R M   GFE  
Sbjct: 711 FCVYGDLKDADNLLVSLQNRKVNLNKYAYTTIIKAHCAKGDVDKAVVYFRQMVEKGFEVS 770

Query: 535 KVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYE 594
              YS V+  L     + EA+  F  M      PD+ ++ +L++ + + G++   +E   
Sbjct: 771 IRDYSAVIGRLCKRCLVTEAKYFFCMMLSDGVCPDQDLFEVLLNAFHQCGHLNSEFELLA 830

Query: 595 AMLQAG 600
            M+++G
Sbjct: 831 EMIKSG 836



 Score = 75.5 bits (184), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 51/206 (24%), Positives = 97/206 (47%)

Query: 362 TYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQM 421
           TYT ++  L +  +     +LL+ M   G  P+ V+YN +I ++ +A  + +A  ++ +M
Sbjct: 633 TYTVVIKGLCKQWKLQESCQLLEDMDAVGLTPDQVSYNTIIQAFCKARDMRKAFQLYDKM 692

Query: 422 QVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHL 481
            +   EP  VTY  LI+     G L  A ++   +Q   ++ + + Y+ II      G +
Sbjct: 693 LLHNLEPTSVTYNILINGFCVYGDLKDADNLLVSLQNRKVNLNKYAYTTIIKAHCAKGDV 752

Query: 482 QAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIV 541
             A   F +MV +G   ++  Y+ +I    K      A   +  M + G  PD+  + ++
Sbjct: 753 DKAVVYFRQMVEKGFEVSIRDYSAVIGRLCKRCLVTEAKYFFCMMLSDGVCPDQDLFEVL 812

Query: 542 MEVLGHCGYLDEAEAVFAEMRRKNWV 567
           +     CG+L+    + AEM +  W+
Sbjct: 813 LNAFHQCGHLNSEFELLAEMIKSGWL 838



 Score = 67.8 bits (164), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 43/178 (24%), Positives = 81/178 (45%)

Query: 354 AGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNE 413
            G   D+ +Y T++    +AR      +L D+M+    +P  VTYN LI+ +     L +
Sbjct: 660 VGLTPDQVSYNTIIQAFCKARDMRKAFQLYDKMLLHNLEPTSVTYNILINGFCVYGDLKD 719

Query: 414 ALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIIN 473
           A ++   +Q      ++  Y T+I  H   G +D A+  +++M   G       YS +I 
Sbjct: 720 ADNLLVSLQNRKVNLNKYAYTTIIKAHCAKGDVDKAVVYFRQMVEKGFEVSIRDYSAVIG 779

Query: 474 CLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF 531
            L K   +  A   FC M++ G  P+   + +++    +  +  S  +L  +M  +G+
Sbjct: 780 RLCKRCLVTEAKYFFCMMLSDGVCPDQDLFEVLLNAFHQCGHLNSEFELLAEMIKSGW 837


>gi|242092396|ref|XP_002436688.1| hypothetical protein SORBIDRAFT_10g007070 [Sorghum bicolor]
 gi|241914911|gb|EER88055.1| hypothetical protein SORBIDRAFT_10g007070 [Sorghum bicolor]
          Length = 551

 Score =  146 bits (368), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 91/346 (26%), Positives = 169/346 (48%), Gaps = 4/346 (1%)

Query: 312 PLAEEALGNTNYSMDAYQANQVLKQLQDH-TVALGFFNWLRRQAGFKHDEHTYTTMVGIL 370
           P     L     +M      +VLK L +   +AL FF W  RQ GF +    +  ++  L
Sbjct: 116 PRIASTLDALGVAMSPELVAEVLKNLSNAGMLALAFFRWAERQEGFSYTAEGFHNLIEAL 175

Query: 371 GRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDR 430
           G+ +QF  +  L++ M   G      T+  ++  Y RA  + EA++ F++M + G + + 
Sbjct: 176 GKIKQFKLVWSLVETMRCRGLLSKD-TFKLIVRRYARARKVKEAVETFEKMSIFGLKTEL 234

Query: 431 VTYCTLIDIHAKAGFLDVAMDMYKKMQAAG-LSPDTFTYSVIINCLGKAGHLQAAHQLFC 489
             Y  LID  +K+  +  A  +YK+M+  G   PD  TY+V++   G    L     ++ 
Sbjct: 235 SDYNWLIDTLSKSKQVKKAQAIYKEMKRKGKFVPDLKTYTVLMEGWGHEKDLLMVKTMYQ 294

Query: 490 EMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCG 549
           EM++ G  P++V Y ++I+   K+     A+K++ +M+ +G  P    Y +++  LG   
Sbjct: 295 EMIDAGIRPDVVAYGMLISAFCKSGKCDEAIKVFYEMEASGCMPSPHVYCMLINGLGSEE 354

Query: 550 YLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCN 609
            LDEA   F + ++  +  + P    +V  + +A     A++  + M +  + PN  T +
Sbjct: 355 RLDEALKYFEQYKKSGFPMEVPTCNAVVGAYCRASKFEHAFKMVDEMRECKIGPNSRTYD 414

Query: 610 SLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSC-CTEAR 654
            +L   ++  +  +AY++ Q M   G +P L TYT+++   C+  R
Sbjct: 415 VILHYLIKSQKFEEAYNVFQRMGMDGCEPQLNTYTMMVGMFCSNGR 460



 Score =  120 bits (302), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 78/339 (23%), Positives = 162/339 (47%), Gaps = 8/339 (2%)

Query: 289 RHFASTGNVVESVSRILRQWKWGPLAEEALGNTNYSMDAYQANQVLKQLQDHTVALGFFN 348
           R +A    V E+V    +   +G   E  L + N+ +D    ++ +K+ Q        + 
Sbjct: 207 RRYARARKVKEAVETFEKMSIFGLKTE--LSDYNWLIDTLSKSKQVKKAQ------AIYK 258

Query: 349 WLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRA 408
            ++R+  F  D  TYT ++   G  +    +  +  +M+  G +P+VV Y  LI ++ ++
Sbjct: 259 EMKRKGKFVPDLKTYTVLMEGWGHEKDLLMVKTMYQEMIDAGIRPDVVAYGMLISAFCKS 318

Query: 409 NYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTY 468
              +EA+ VF +M+  GC P    YC LI+       LD A+  +++ + +G   +  T 
Sbjct: 319 GKCDEAIKVFYEMEASGCMPSPHVYCMLINGLGSEERLDEALKYFEQYKKSGFPMEVPTC 378

Query: 469 SVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQN 528
           + ++    +A   + A ++  EM      PN  TY++++    K++ ++ A  +++ M  
Sbjct: 379 NAVVGAYCRASKFEHAFKMVDEMRECKIGPNSRTYDVILHYLIKSQKFEEAYNVFQRMGM 438

Query: 529 AGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRK 588
            G EP   TY++++ +    G +D A  V+ +M  +  +P   ++  L++       + +
Sbjct: 439 DGCEPQLNTYTMMVGMFCSNGRVDMALNVWKQMGERGVLPCMHMFSALINGLCFENRLEE 498

Query: 589 AWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHL 627
           A  +++ ML  G+RP     ++L  A +  G++S A  +
Sbjct: 499 ACVYFQEMLDKGIRPPGQLFSNLKEALVEGGRISLAQEM 537



 Score =  111 bits (277), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 73/293 (24%), Positives = 134/293 (45%), Gaps = 1/293 (0%)

Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDG-CQPNVVTYNRLIHSYGRANYLNE 413
           G K +   Y  ++  L +++Q      +  +M R G   P++ TY  L+  +G    L  
Sbjct: 229 GLKTELSDYNWLIDTLSKSKQVKKAQAIYKEMKRKGKFVPDLKTYTVLMEGWGHEKDLLM 288

Query: 414 ALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIIN 473
              ++++M   G  PD V Y  LI    K+G  D A+ ++ +M+A+G  P    Y ++IN
Sbjct: 289 VKTMYQEMIDAGIRPDVVAYGMLISAFCKSGKCDEAIKVFYEMEASGCMPSPHVYCMLIN 348

Query: 474 CLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEP 533
            LG    L  A + F +    G    + T N ++    +A  ++ A K+  +M+     P
Sbjct: 349 GLGSEERLDEALKYFEQYKKSGFPMEVPTCNAVVGAYCRASKFEHAFKMVDEMRECKIGP 408

Query: 534 DKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWY 593
           +  TY +++  L      +EA  VF  M      P    Y ++V ++   G V  A   +
Sbjct: 409 NSRTYDVILHYLIKSQKFEEAYNVFQRMGMDGCEPQLNTYTMMVGMFCSNGRVDMALNVW 468

Query: 594 EAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLL 646
           + M + G+ P +   ++L++      +L +A    Q ML+ G++P  Q ++ L
Sbjct: 469 KQMGERGVLPCMHMFSALINGLCFENRLEEACVYFQEMLDKGIRPPGQLFSNL 521


>gi|255539453|ref|XP_002510791.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223549906|gb|EEF51393.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 475

 Score =  146 bits (368), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 100/359 (27%), Positives = 173/359 (48%), Gaps = 12/359 (3%)

Query: 301 VSRILRQWKWGPLAEEALGNTNYSMDAYQANQVLKQL--------QDHTVALG--FFNWL 350
           V  ILRQ   G  A+ AL   +  +      +VL  +        +     LG  FF W 
Sbjct: 85  VLDILRQDGPGFDAKAALSELDLRVSGLLVREVLAGILRNIGIDNKTRCAKLGYKFFIWS 144

Query: 351 RRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANY 410
            +Q  ++H  + Y  ++ I     +F A+ +LLD+MV +G      T+N LI + G A  
Sbjct: 145 SQQENYRHTANNYHLIMKIFADCEEFKAMWRLLDEMVENGFPTTARTFNILICTCGGAGL 204

Query: 411 LNEALDVFKQMQVVGCEPDRVTY-CTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYS 469
             + ++ F + +     P + +Y   L+ + A   +  +   ++++M   G  PDT TY+
Sbjct: 205 ARKVVERFIKSKTFNYRPFKHSYNAILLSLLAIREYKLIEW-VHQQMLVEGYCPDTLTYN 263

Query: 470 VIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNA 529
           +++    + G L   H+L  EM   G  P+  TYNI++ +  K     +ALKL   M+  
Sbjct: 264 ILMCAKYRLGKLHHFHRLLDEMGRSGFSPDFHTYNILLHVLGKGNKPIAALKLLNHMKEI 323

Query: 530 GFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKA 589
           GF+P  + ++ +++ L   G LD     F EM +  +VPD   Y +++  +  AG + KA
Sbjct: 324 GFDPSILHFTTLIDGLSRAGNLDACNYFFDEMIKNGFVPDVVCYTVMITGYIVAGELEKA 383

Query: 590 WEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
            E ++ M+  G  PNV T NS++      G+  +A  +L+ M + G KP+   Y  L++
Sbjct: 384 REIFDEMIARGQLPNVFTYNSMIRGLCMAGKFEEARCMLKEMGSRGCKPNFLVYNTLVN 442



 Score =  119 bits (298), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 70/216 (32%), Positives = 114/216 (52%), Gaps = 3/216 (1%)

Query: 349 WLRRQ---AGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSY 405
           W+ +Q    G+  D  TY  ++    R  +    ++LLD+M R G  P+  TYN L+H  
Sbjct: 245 WVHQQMLVEGYCPDTLTYNILMCAKYRLGKLHHFHRLLDEMGRSGFSPDFHTYNILLHVL 304

Query: 406 GRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDT 465
           G+ N    AL +   M+ +G +P  + + TLID  ++AG LD     + +M   G  PD 
Sbjct: 305 GKGNKPIAALKLLNHMKEIGFDPSILHFTTLIDGLSRAGNLDACNYFFDEMIKNGFVPDV 364

Query: 466 FTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRD 525
             Y+V+I     AG L+ A ++F EM+ +G +PN+ TYN MI     A  ++ A  + ++
Sbjct: 365 VCYTVMITGYIVAGELEKAREIFDEMIARGQLPNVFTYNSMIRGLCMAGKFEEARCMLKE 424

Query: 526 MQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEM 561
           M + G +P+ + Y+ ++  L + G L EA  V  EM
Sbjct: 425 MGSRGCKPNFLVYNTLVNNLRNAGKLSEAREVIKEM 460


>gi|255584082|ref|XP_002532784.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223527472|gb|EEF29603.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 487

 Score =  146 bits (368), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 100/355 (28%), Positives = 172/355 (48%)

Query: 359 DEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVF 418
           D  TY T++    R   F A   LL++M      P+VVTYN LI    R   L E+L++F
Sbjct: 71  DVVTYNTLIDAYSRFVSFNAAYSLLNRMREASISPDVVTYNSLIAGAARNCLLLESLNLF 130

Query: 419 KQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKA 478
            +M  +G  PD  +Y TL+    K G  + A ++ +++   GLSP   T++++IN L K 
Sbjct: 131 DEMLNMGIVPDVWSYNTLMHCFFKLGKAEEANEVLRQIFGHGLSPCPTTFNIMINGLCKN 190

Query: 479 GHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTY 538
           G    A  LF  +   G +P L+TYNI+I    K R  ++A  + ++++ +G+ P+ +TY
Sbjct: 191 GFTSNALMLFRSLKQHGFVPQLITYNILINGLCKDRRLRAARSMLKELETSGYVPNAITY 250

Query: 539 SIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQ 598
           + VM+         +   +  EM  K +  D   Y  +V +  K G + +A E+   M++
Sbjct: 251 TTVMKFCFRSRRFKQGLEILQEMIDKGYTFDGFAYCTVVGVLIKTGRLEEATEYMRQMIK 310

Query: 599 AGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYD 658
            G+  ++ + N+L++ + + G L  AY LL  +   GL+    T+T+L++   +A +   
Sbjct: 311 NGIEHDLASYNTLINLYCKQGNLEAAYQLLDEIEKEGLQCDEYTHTILINWMCKAGNILG 370

Query: 659 MGFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRESKRGLV 713
                + M + G  + +  L+    G       DH     E M   D  +   LV
Sbjct: 371 ARRHMQHMNMMGFDSCLVALNCMVDGLCKNGQIDHAVKLFESMKMRDSFTYSSLV 425



 Score =  101 bits (251), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 81/313 (25%), Positives = 145/313 (46%), Gaps = 28/313 (8%)

Query: 327 AYQANQVLKQLQDHTV----------------------ALGFFNWLRRQAGFKHDEHTYT 364
           A +AN+VL+Q+  H +                      AL  F  L+ Q GF     TY 
Sbjct: 158 AEEANEVLRQIFGHGLSPCPTTFNIMINGLCKNGFTSNALMLFRSLK-QHGFVPQLITYN 216

Query: 365 TMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVV 424
            ++  L + R+  A   +L ++   G  PN +TY  ++    R+    + L++ ++M   
Sbjct: 217 ILINGLCKDRRLRAARSMLKELETSGYVPNAITYTTVMKFCFRSRRFKQGLEILQEMIDK 276

Query: 425 GCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAA 484
           G   D   YCT++ +  K G L+ A +  ++M   G+  D  +Y+ +IN   K G+L+AA
Sbjct: 277 GYTFDGFAYCTVVGVLIKTGRLEEATEYMRQMIKNGIEHDLASYNTLINLYCKQGNLEAA 336

Query: 485 HQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEV 544
           +QL  E+  +G   +  T+ I+I    KA N   A +  + M   GF+   V  + +++ 
Sbjct: 337 YQLLDEIEKEGLQCDEYTHTILINWMCKAGNILGARRHMQHMNMMGFDSCLVALNCMVDG 396

Query: 545 LGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPN 604
           L   G +D A  +F  M+ +    D   Y  LV    K G   +A +   + L++G++  
Sbjct: 397 LCKNGQIDHAVKLFESMKMR----DSFTYSSLVHNLCKNGRFHRASKLLLSCLRSGMKI- 451

Query: 605 VPTCNSLLSAFLR 617
           +P+   ++ + LR
Sbjct: 452 LPSAQRVVISGLR 464



 Score = 95.9 bits (237), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 63/234 (26%), Positives = 113/234 (48%)

Query: 402 IHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGL 461
           I S  +A  LN+A  V      +G  PD VTY TLID +++    + A  +  +M+ A +
Sbjct: 44  IASLCKAKELNKAESVIIDGIRLGVLPDVVTYNTLIDAYSRFVSFNAAYSLLNRMREASI 103

Query: 462 SPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALK 521
           SPD  TY+ +I    +   L  +  LF EM+N G +P++ +YN ++    K    + A +
Sbjct: 104 SPDVVTYNSLIAGAARNCLLLESLNLFDEMLNMGIVPDVWSYNTLMHCFFKLGKAEEANE 163

Query: 522 LYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWG 581
           + R +   G  P   T++I++  L   G+   A  +F  +++  +VP    Y +L++   
Sbjct: 164 VLRQIFGHGLSPCPTTFNIMINGLCKNGFTSNALMLFRSLKQHGFVPQLITYNILINGLC 223

Query: 582 KAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLG 635
           K   +R A    + +  +G  PN  T  +++    R  +      +LQ M++ G
Sbjct: 224 KDRRLRAARSMLKELETSGYVPNAITYTTVMKFCFRSRRFKQGLEILQEMIDKG 277



 Score = 75.1 bits (183), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 51/180 (28%), Positives = 85/180 (47%)

Query: 469 SVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQN 528
           ++ I  L KA  L  A  +  + +  G +P++VTYN +I   ++  ++ +A  L   M+ 
Sbjct: 41  NISIASLCKAKELNKAESVIIDGIRLGVLPDVVTYNTLIDAYSRFVSFNAAYSLLNRMRE 100

Query: 529 AGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRK 588
           A   PD VTY+ ++        L E+  +F EM     VPD   Y  L+  + K G   +
Sbjct: 101 ASISPDVVTYNSLIAGAARNCLLLESLNLFDEMLNMGIVPDVWSYNTLMHCFFKLGKAEE 160

Query: 589 AWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
           A E    +   GL P   T N +++   + G  S+A  L + +   G  P L TY +L++
Sbjct: 161 ANEVLRQIFGHGLSPCPTTFNIMINGLCKNGFTSNALMLFRSLKQHGFVPQLITYNILIN 220


>gi|359474892|ref|XP_002276432.2| PREDICTED: pentatricopeptide repeat-containing protein At4g34830,
           chloroplastic-like [Vitis vinifera]
          Length = 1115

 Score =  146 bits (368), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 99/322 (30%), Positives = 158/322 (49%), Gaps = 7/322 (2%)

Query: 345 GFFNWLR--RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLI 402
           G F  L+  R+AG K D   YTT++    ++ +  A+ ++  +MV    +PNV TY  LI
Sbjct: 510 GAFQVLQLVREAGLKADCKLYTTLISTCAKSGKVDAMFEVFHEMVNAEVEPNVHTYGALI 569

Query: 403 HSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAG-- 460
              GRA  + +A   +  M+    EPDRV +  LI    ++G +D A D+  +M+A    
Sbjct: 570 DGCGRAGQVAKAFGAYGIMRSKKVEPDRVVFNALITACGQSGAVDRAFDVLAEMRAETQP 629

Query: 461 LSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNL-VTYNIMIALQAKARNYQSA 519
           + PD  T   +I     AG +  A +++ +M++Q  I      Y I ++  ++  +++ A
Sbjct: 630 IDPDHITVGALIKACTNAGQVDRAREVY-KMIDQYNIKGTPEVYTIAVSSHSQIGDWEFA 688

Query: 520 LKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDL 579
             +Y DM   G  PD++  S +++V GH G LD A  V  E R +        Y  L+  
Sbjct: 689 YSVYTDMTRKGVVPDEMFLSALIDVAGHAGKLDAAFEVIQEARIQGIPLGIVSYSSLMGA 748

Query: 580 WGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPS 639
              A N +KA E Y  +    L P V T N+L++A     QL  A  +L  M   GL P+
Sbjct: 749 CSNAKNWQKALELYVDIKSMKLNPTVSTMNALITALCEGEQLEKAMEVLSDMKRAGLCPN 808

Query: 640 LQTYTLLLSCCTEARSPYDMGF 661
             TY++LL   +E +   D+G 
Sbjct: 809 TITYSILL-VASEKKDDIDVGL 829



 Score = 87.0 bits (214), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 74/315 (23%), Positives = 134/315 (42%), Gaps = 32/315 (10%)

Query: 373 ARQFGAINKLLD--------QMVRDGCQPNVVTYNRLIHS--YGRANYLNEALDVFKQMQ 422
           + +F A N+LL         Q++ D  +  ++  +++ H+  +          + F+  +
Sbjct: 426 SEKFSAYNRLLSEGRLSDCIQLLEDMEKMGLLDMDKVYHAKFFKICRSQKAVTEAFRFAK 485

Query: 423 VVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQ 482
           ++   P   T+  L+ + A +     A  + + ++ AGL  D   Y+ +I+   K+G + 
Sbjct: 486 LIPT-PTLSTFNMLMSVCATSQDSAGAFQVLQLVREAGLKADCKLYTTLISTCAKSGKVD 544

Query: 483 AAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVM 542
           A  ++F EMVN    PN+ TY  +I    +A     A   Y  M++   EPD+V ++ ++
Sbjct: 545 AMFEVFHEMVNAEVEPNVHTYGALIDGCGRAGQVAKAFGAYGIMRSKKVEPDRVVFNALI 604

Query: 543 EVLGHCGYLDEAEAVFAEMRRKNWV--PDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAG 600
              G  G +D A  V AEMR +     PD    G L+     AG V +A E Y+ + Q  
Sbjct: 605 TACGQSGAVDRAFDVLAEMRAETQPIDPDHITVGALIKACTNAGQVDRAREVYKMIDQYN 664

Query: 601 LRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMG 660
           ++         +S+  ++G    AY +   M   G+ P                   D  
Sbjct: 665 IKGTPEVYTIAVSSHSQIGDWEFAYSVYTDMTRKGVVP-------------------DEM 705

Query: 661 FCHELMAVSGHPAHM 675
           F   L+ V+GH   +
Sbjct: 706 FLSALIDVAGHAGKL 720



 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 36/151 (23%), Positives = 71/151 (47%)

Query: 386 MVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGF 445
           M R G  P+ +  + LI   G A  L+ A +V ++ ++ G     V+Y +L+   + A  
Sbjct: 695 MTRKGVVPDEMFLSALIDVAGHAGKLDAAFEVIQEARIQGIPLGIVSYSSLMGACSNAKN 754

Query: 446 LDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNI 505
              A+++Y  +++  L+P   T + +I  L +   L+ A ++  +M   G  PN +TY+I
Sbjct: 755 WQKALELYVDIKSMKLNPTVSTMNALITALCEGEQLEKAMEVLSDMKRAGLCPNTITYSI 814

Query: 506 MIALQAKARNYQSALKLYRDMQNAGFEPDKV 536
           ++    K  +    L +    +     P+ V
Sbjct: 815 LLVASEKKDDIDVGLMILSQARKDSVAPNLV 845



 Score = 61.2 bits (147), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 51/234 (21%), Positives = 98/234 (41%), Gaps = 27/234 (11%)

Query: 336 QLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNV 395
           Q+ D   A   +  + R+ G   DE   + ++ + G A +  A  +++ +    G    +
Sbjct: 681 QIGDWEFAYSVYTDMTRK-GVVPDEMFLSALIDVAGHAGKLDAAFEVIQEARIQGIPLGI 739

Query: 396 VTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKK 455
           V+Y+ L+ +   A    +AL+++  ++ +   P   T   LI    +   L+ AM++   
Sbjct: 740 VSYSSLMGACSNAKNWQKALELYVDIKSMKLNPTVSTMNALITALCEGEQLEKAMEVLSD 799

Query: 456 MQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIAL------ 509
           M+ AGL P+T TYS+++    K   +     +  +       PNLV    ++ +      
Sbjct: 800 MKRAGLCPNTITYSILLVASEKKDDIDVGLMILSQARKDSVAPNLVMCRCLVGMCLRRFE 859

Query: 510 -----------------QAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLG 546
                            Q   +   SAL +YR+  +AG  P   T  ++ +VLG
Sbjct: 860 KACALGEPVLSFNSGRPQIDNKWTSSALMVYRETVSAGVIP---TMELLSQVLG 910


>gi|296084463|emb|CBI25022.3| unnamed protein product [Vitis vinifera]
          Length = 927

 Score =  146 bits (368), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 85/317 (26%), Positives = 159/317 (50%)

Query: 354 AGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNE 413
           AG KH+  TY+ ++    R + +     + + +V+DG +P+VV YN +I ++     ++ 
Sbjct: 472 AGIKHNMKTYSMLINGFVRLKDWANAFAVFEDVVKDGLKPDVVLYNNIIRAFCGMGNMDR 531

Query: 414 ALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIIN 473
           A+   K+MQ     P   T+  +I   A++G +  A++++  M+ +G  P   T++ +I 
Sbjct: 532 AIRTVKEMQKERHRPTTRTFMPIIHGFARSGDMRRALEIFDMMRWSGCIPTVHTFNALIL 591

Query: 474 CLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEP 533
            L +   ++ A ++  EM   G  PN  TY  ++   A   +   A + +  ++  G E 
Sbjct: 592 GLVEKCQMEKAVEILDEMSLAGISPNEHTYTTIMHGYASLGDTGKAFEYFTKLKTEGLEL 651

Query: 534 DKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWY 593
           D  TY  +++     G +  A AV  EM  +    +  VY +L+D W + G+V +A E  
Sbjct: 652 DVYTYEALLKACCKSGRMQSALAVTREMSSQKIPRNTFVYNILIDGWARRGDVWEAAELM 711

Query: 594 EAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEA 653
           + M Q G++P++ T  S ++A  + G +  A   +Q M  +G+KP+++TYT L+     A
Sbjct: 712 QQMKQEGVQPDIHTYTSFINACCKAGDMQRATKTIQEMEVVGVKPNIKTYTTLIHGWARA 771

Query: 654 RSPYDMGFCHELMAVSG 670
             P     C + M  +G
Sbjct: 772 SLPEKALKCFQEMKSAG 788



 Score =  118 bits (295), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 75/272 (27%), Positives = 128/272 (47%), Gaps = 4/272 (1%)

Query: 357 KHDEHTYTTMVGILGRARQFGAINK---LLDQMVRDGCQPNVVTYNRLIHSYGRANYLNE 413
           +H   T T M  I G AR  G + +   + D M   GC P V T+N LI        + +
Sbjct: 543 RHRPTTRTFMPIIHGFARS-GDMRRALEIFDMMRWSGCIPTVHTFNALILGLVEKCQMEK 601

Query: 414 ALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIIN 473
           A+++  +M + G  P+  TY T++  +A  G    A + + K++  GL  D +TY  ++ 
Sbjct: 602 AVEILDEMSLAGISPNEHTYTTIMHGYASLGDTGKAFEYFTKLKTEGLELDVYTYEALLK 661

Query: 474 CLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEP 533
              K+G +Q+A  +  EM +Q    N   YNI+I   A+  +   A +L + M+  G +P
Sbjct: 662 ACCKSGRMQSALAVTREMSSQKIPRNTFVYNILIDGWARRGDVWEAAELMQQMKQEGVQP 721

Query: 534 DKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWY 593
           D  TY+  +      G +  A     EM      P+   Y  L+  W +A    KA + +
Sbjct: 722 DIHTYTSFINACCKAGDMQRATKTIQEMEVVGVKPNIKTYTTLIHGWARASLPEKALKCF 781

Query: 594 EAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAY 625
           + M  AGL+P+    + L+++ L    +++ Y
Sbjct: 782 QEMKSAGLKPDKAVYHCLMTSLLSRASVAEEY 813



 Score =  111 bits (277), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 64/296 (21%), Positives = 142/296 (47%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           ++ G +    TY+ +VG   +     A +    +        N + Y  +I+++ +A  +
Sbjct: 330 KEEGIEMSLVTYSILVGGFAKIADAEAADHWFKEAKERHTTLNAIIYGNIIYAHCQACNM 389

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
            +A  + ++M+  G +     Y T++D +   G  +  + ++ +++  G +P   +Y  +
Sbjct: 390 TQAEALVREMEEEGIDAPIDIYHTMMDGYTIIGNEEKCLIVFDRLKECGFTPSVISYGCL 449

Query: 472 INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF 531
           IN   K G +  A ++   M   G   N+ TY+++I    + +++ +A  ++ D+   G 
Sbjct: 450 INLYIKIGKVSKALEVSKMMEVAGIKHNMKTYSMLINGFVRLKDWANAFAVFEDVVKDGL 509

Query: 532 EPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWE 591
           +PD V Y+ ++      G +D A     EM+++   P    +  ++  + ++G++R+A E
Sbjct: 510 KPDVVLYNNIIRAFCGMGNMDRAIRTVKEMQKERHRPTTRTFMPIIHGFARSGDMRRALE 569

Query: 592 WYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
            ++ M  +G  P V T N+L+   +   Q+  A  +L  M   G+ P+  TYT ++
Sbjct: 570 IFDMMRWSGCIPTVHTFNALILGLVEKCQMEKAVEILDEMSLAGISPNEHTYTTIM 625



 Score =  108 bits (270), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 65/256 (25%), Positives = 122/256 (47%)

Query: 392 QPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMD 451
           +P+   +  ++  Y R   ++ A   F+ M+  G EP    Y +LI  +A    ++ A+ 
Sbjct: 265 KPSRKEFGLMVTYYARRGDMHHARGTFESMRARGIEPTSHVYTSLIHAYAVGRDMEEALS 324

Query: 452 MYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQA 511
             +KM+  G+     TYS+++    K    +AA   F E   +    N + Y  +I    
Sbjct: 325 CVRKMKEEGIEMSLVTYSILVGGFAKIADAEAADHWFKEAKERHTTLNAIIYGNIIYAHC 384

Query: 512 KARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEP 571
           +A N   A  L R+M+  G +     Y  +M+     G  ++   VF  ++   + P   
Sbjct: 385 QACNMTQAEALVREMEEEGIDAPIDIYHTMMDGYTIIGNEEKCLIVFDRLKECGFTPSVI 444

Query: 572 VYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGM 631
            YG L++L+ K G V KA E  + M  AG++ N+ T + L++ F+R+   ++A+ + + +
Sbjct: 445 SYGCLINLYIKIGKVSKALEVSKMMEVAGIKHNMKTYSMLINGFVRLKDWANAFAVFEDV 504

Query: 632 LNLGLKPSLQTYTLLL 647
           +  GLKP +  Y  ++
Sbjct: 505 VKDGLKPDVVLYNNII 520



 Score =  103 bits (256), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 64/239 (26%), Positives = 115/239 (48%), Gaps = 1/239 (0%)

Query: 339 DHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTY 398
           D   AL  F+ +R  +G     HT+  ++  L    Q     ++LD+M   G  PN  TY
Sbjct: 563 DMRRALEIFDMMR-WSGCIPTVHTFNALILGLVEKCQMEKAVEILDEMSLAGISPNEHTY 621

Query: 399 NRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQA 458
             ++H Y       +A + F +++  G E D  TY  L+    K+G +  A+ + ++M +
Sbjct: 622 TTIMHGYASLGDTGKAFEYFTKLKTEGLELDVYTYEALLKACCKSGRMQSALAVTREMSS 681

Query: 459 AGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQS 518
             +  +TF Y+++I+   + G +  A +L  +M  +G  P++ TY   I    KA + Q 
Sbjct: 682 QKIPRNTFVYNILIDGWARRGDVWEAAELMQQMKQEGVQPDIHTYTSFINACCKAGDMQR 741

Query: 519 ALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLV 577
           A K  ++M+  G +P+  TY+ ++         ++A   F EM+     PD+ VY  L+
Sbjct: 742 ATKTIQEMEVVGVKPNIKTYTTLIHGWARASLPEKALKCFQEMKSAGLKPDKAVYHCLM 800



 Score =  101 bits (251), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 60/192 (31%), Positives = 99/192 (51%)

Query: 354 AGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNE 413
           AG   +EHTYTT++         G   +   ++  +G + +V TY  L+ +  ++  +  
Sbjct: 612 AGISPNEHTYTTIMHGYASLGDTGKAFEYFTKLKTEGLELDVYTYEALLKACCKSGRMQS 671

Query: 414 ALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIIN 473
           AL V ++M       +   Y  LID  A+ G +  A ++ ++M+  G+ PD  TY+  IN
Sbjct: 672 ALAVTREMSSQKIPRNTFVYNILIDGWARRGDVWEAAELMQQMKQEGVQPDIHTYTSFIN 731

Query: 474 CLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEP 533
              KAG +Q A +   EM   G  PN+ TY  +I   A+A   + ALK +++M++AG +P
Sbjct: 732 ACCKAGDMQRATKTIQEMEVVGVKPNIKTYTTLIHGWARASLPEKALKCFQEMKSAGLKP 791

Query: 534 DKVTYSIVMEVL 545
           DK  Y  +M  L
Sbjct: 792 DKAVYHCLMTSL 803



 Score = 80.5 bits (197), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 48/224 (21%), Positives = 114/224 (50%), Gaps = 4/224 (1%)

Query: 427 EPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQ 486
           +P R  +  ++  +A+ G +  A   ++ M+A G+ P +  Y+ +I+       ++ A  
Sbjct: 265 KPSRKEFGLMVTYYARRGDMHHARGTFESMRARGIEPTSHVYTSLIHAYAVGRDMEEALS 324

Query: 487 LFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLG 546
              +M  +G   +LVTY+I++   AK  + ++A   +++ +      + + Y  +  +  
Sbjct: 325 CVRKMKEEGIEMSLVTYSILVGGFAKIADAEAADHWFKEAKERHTTLNAIIYGNI--IYA 382

Query: 547 HCGY--LDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPN 604
           HC    + +AEA+  EM  +       +Y  ++D +   GN  K    ++ + + G  P+
Sbjct: 383 HCQACNMTQAEALVREMEEEGIDAPIDIYHTMMDGYTIIGNEEKCLIVFDRLKECGFTPS 442

Query: 605 VPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
           V +   L++ ++++G++S A  + + M   G+K +++TY++L++
Sbjct: 443 VISYGCLINLYIKIGKVSKALEVSKMMEVAGIKHNMKTYSMLIN 486


>gi|302818229|ref|XP_002990788.1| hypothetical protein SELMODRAFT_132337 [Selaginella moellendorffii]
 gi|300141349|gb|EFJ08061.1| hypothetical protein SELMODRAFT_132337 [Selaginella moellendorffii]
          Length = 624

 Score =  146 bits (368), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 92/285 (32%), Positives = 136/285 (47%), Gaps = 3/285 (1%)

Query: 359 DEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVF 418
           D  T+  ++  L R+ Q     +LL +M   GC P+   YN LI  Y +A    +A    
Sbjct: 9   DAFTFAILLRGLCRSNQLEKARQLLGRMKEMGCVPDDAIYNALISGYSKAKDFGQAFKFL 68

Query: 419 KQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKA 478
            +M    C P  VTY  ++D   KAG    A+ +  +M+  G SP+ +TY+VI+  L + 
Sbjct: 69  AEMVKNHCLPTVVTYTNIVDGLCKAGRTKDAVKLLDEMRDKGCSPNIYTYNVIVEGLCEE 128

Query: 479 GHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTY 538
             L  A ++  EM  +G  P++VTYN  I    K      A K    M      PD V+Y
Sbjct: 129 RKLDEAKKMLEEMAVRGYFPDVVTYNSFIKGLCKCDRVDEARKFLARMP---VTPDVVSY 185

Query: 539 SIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQ 598
           + V+  L   G LD A  +  +M  +   PD   Y  L+D + K G V +A    ++ML+
Sbjct: 186 TTVINGLCKSGDLDSASRMLDQMTNRGCTPDVVTYSSLIDGFCKGGEVERAMGLLDSMLK 245

Query: 599 AGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTY 643
            G RPN+   NSLL A  R+G +  A  +L  M   G  P + +Y
Sbjct: 246 LGCRPNMVAYNSLLGALHRLGHIGKAEDMLVEMERRGFTPDVVSY 290



 Score =  140 bits (353), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 84/262 (32%), Positives = 132/262 (50%), Gaps = 3/262 (1%)

Query: 386 MVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGF 445
           M+   CQP+  T+  L+    R+N L +A  +  +M+ +GC PD   Y  LI  ++KA  
Sbjct: 1   MIDKSCQPDAFTFAILLRGLCRSNQLEKARQLLGRMKEMGCVPDDAIYNALISGYSKAKD 60

Query: 446 LDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNI 505
              A     +M      P   TY+ I++ L KAG  + A +L  EM ++GC PN+ TYN+
Sbjct: 61  FGQAFKFLAEMVKNHCLPTVVTYTNIVDGLCKAGRTKDAVKLLDEMRDKGCSPNIYTYNV 120

Query: 506 MIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKN 565
           ++    + R    A K+  +M   G+ PD VTY+  ++ L  C  +DEA    A M    
Sbjct: 121 IVEGLCEERKLDEAKKMLEEMAVRGYFPDVVTYNSFIKGLCKCDRVDEARKFLARM---P 177

Query: 566 WVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAY 625
             PD   Y  +++   K+G++  A    + M   G  P+V T +SL+  F + G++  A 
Sbjct: 178 VTPDVVSYTTVINGLCKSGDLDSASRMLDQMTNRGCTPDVVTYSSLIDGFCKGGEVERAM 237

Query: 626 HLLQGMLNLGLKPSLQTYTLLL 647
            LL  ML LG +P++  Y  LL
Sbjct: 238 GLLDSMLKLGCRPNMVAYNSLL 259



 Score =  140 bits (353), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 89/299 (29%), Positives = 155/299 (51%), Gaps = 3/299 (1%)

Query: 359 DEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVF 418
           D  +YTT++  L ++    + +++LDQM   GC P+VVTY+ LI  + +   +  A+ + 
Sbjct: 181 DVVSYTTVINGLCKSGDLDSASRMLDQMTNRGCTPDVVTYSSLIDGFCKGGEVERAMGLL 240

Query: 419 KQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKA 478
             M  +GC P+ V Y +L+    + G +  A DM  +M+  G +PD  +Y+  I+ L KA
Sbjct: 241 DSMLKLGCRPNMVAYNSLLGALHRLGHIGKAEDMLVEMERRGFTPDVVSYNACIDGLCKA 300

Query: 479 GHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTY 538
             ++ A  +F  MV +GC PN  +Y++++    K +    A+ L    +      D + Y
Sbjct: 301 ERVKKAKAVFDRMVERGCTPNASSYSMLVEELCKKKELDDAITLVEQAREKYQIVDILLY 360

Query: 539 SIVMEVLGHCGYLDEAEAVFAE-MRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAML 597
           +++++ L   G  DEA A+F++ +  K   PD   Y +++D   K   + KA + ++ ML
Sbjct: 361 TVLLDGLCKGGRFDEACALFSKVLDEKICEPDVFFYNVMLDSHCKRRQIDKALQIHKQML 420

Query: 598 QAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTY-TLLLSCCTEARS 655
           +     NV T N L+       +LSDA  +L  M++ G  P   TY TL+ + C   +S
Sbjct: 421 ERNC-CNVVTWNILVHGLCVDDRLSDAETMLLTMVDEGFIPDFVTYGTLVDAMCKCGKS 478



 Score =  139 bits (350), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 86/329 (26%), Positives = 153/329 (46%), Gaps = 32/329 (9%)

Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
           ++ G   D+  Y  ++    +A+ FG   K L +MV++ C P VVTY  ++    +A   
Sbjct: 37  KEMGCVPDDAIYNALISGYSKAKDFGQAFKFLAEMVKNHCLPTVVTYTNIVDGLCKAGRT 96

Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAG----------- 460
            +A+ +  +M+  GC P+  TY  +++   +   LD A  M ++M   G           
Sbjct: 97  KDAVKLLDEMRDKGCSPNIYTYNVIVEGLCEERKLDEAKKMLEEMAVRGYFPDVVTYNSF 156

Query: 461 ---------------------LSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPN 499
                                ++PD  +Y+ +IN L K+G L +A ++  +M N+GC P+
Sbjct: 157 IKGLCKCDRVDEARKFLARMPVTPDVVSYTTVINGLCKSGDLDSASRMLDQMTNRGCTPD 216

Query: 500 LVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFA 559
           +VTY+ +I    K    + A+ L   M   G  P+ V Y+ ++  L   G++ +AE +  
Sbjct: 217 VVTYSSLIDGFCKGGEVERAMGLLDSMLKLGCRPNMVAYNSLLGALHRLGHIGKAEDMLV 276

Query: 560 EMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVG 619
           EM R+ + PD   Y   +D   KA  V+KA   ++ M++ G  PN  + + L+    +  
Sbjct: 277 EMERRGFTPDVVSYNACIDGLCKAERVKKAKAVFDRMVERGCTPNASSYSMLVEELCKKK 336

Query: 620 QLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
           +L DA  L++          +  YT+LL 
Sbjct: 337 ELDDAITLVEQAREKYQIVDILLYTVLLD 365



 Score =  119 bits (298), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 79/287 (27%), Positives = 142/287 (49%), Gaps = 3/287 (1%)

Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLI 402
           A+G  + + +  G + +   Y +++G L R    G    +L +M R G  P+VV+YN  I
Sbjct: 236 AMGLLDSMLK-LGCRPNMVAYNSLLGALHRLGHIGKAEDMLVEMERRGFTPDVVSYNACI 294

Query: 403 HSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLS 462
               +A  + +A  VF +M   GC P+  +Y  L++   K   LD A+ + ++ +     
Sbjct: 295 DGLCKAERVKKAKAVFDRMVERGCTPNASSYSMLVEELCKKKELDDAITLVEQAREKYQI 354

Query: 463 PDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQG-CIPNLVTYNIMIALQAKARNYQSALK 521
            D   Y+V+++ L K G    A  LF +++++  C P++  YN+M+    K R    AL+
Sbjct: 355 VDILLYTVLLDGLCKGGRFDEACALFSKVLDEKICEPDVFFYNVMLDSHCKRRQIDKALQ 414

Query: 522 LYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWG 581
           +++ M       + VT++I++  L     L +AE +   M  + ++PD   YG LVD   
Sbjct: 415 IHKQMLERNC-CNVVTWNILVHGLCVDDRLSDAETMLLTMVDEGFIPDFVTYGTLVDAMC 473

Query: 582 KAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLL 628
           K G    A E +E  ++ G  P+V T ++L++  +      +AY L 
Sbjct: 474 KCGKSAAALELFEEAVKGGCVPDVVTYSALITGLVHENMAEEAYLLF 520



 Score = 82.8 bits (203), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 68/259 (26%), Positives = 119/259 (45%), Gaps = 13/259 (5%)

Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLI 402
           A   F+ +  +   + D   Y  M+    + RQ     ++  QM+   C  NVVT+N L+
Sbjct: 376 ACALFSKVLDEKICEPDVFFYNVMLDSHCKRRQIDKALQIHKQMLERNC-CNVVTWNILV 434

Query: 403 HSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLS 462
           H     + L++A  +   M   G  PD VTY TL+D   K G    A++++++    G  
Sbjct: 435 HGLCVDDRLSDAETMLLTMVDEGFIPDFVTYGTLVDAMCKCGKSAAALELFEEAVKGGCV 494

Query: 463 PDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKL 522
           PD  TYS +I  L      + A+ LF ++       ++  +N MI   A+  +    LKL
Sbjct: 495 PDVVTYSALITGLVHENMAEEAYLLFTKL-------DVALWNAMILGYAENGSGDLGLKL 547

Query: 523 YRDMQNAGFEPDKVTYSIVMEVLG---HCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDL 579
           + ++  +  EP+  T+    E+ G       L +A  +F    +  + PD  V   L+D+
Sbjct: 548 FVELIESDVEPNARTFG--KEISGKLVKAESLGKARGLFDRAVKGGFFPDLFVANTLIDV 605

Query: 580 WGKAGNVRKAWEWYEAMLQ 598
           + K G++ +A   + +M Q
Sbjct: 606 FAKCGDLEEARRIFYSMKQ 624



 Score = 68.9 bits (167), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 54/222 (24%), Positives = 98/222 (44%), Gaps = 5/222 (2%)

Query: 526 MQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGN 585
           M +   +PD  T++I++  L     L++A  +   M+    VPD+ +Y  L+  + KA +
Sbjct: 1   MIDKSCQPDAFTFAILLRGLCRSNQLEKARQLLGRMKEMGCVPDDAIYNALISGYSKAKD 60

Query: 586 VRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTL 645
             +A+++   M++    P V T  +++    + G+  DA  LL  M + G  P++ TY +
Sbjct: 61  FGQAFKFLAEMVKNHCLPTVVTYTNIVDGLCKAGRTKDAVKLLDEMRDKGCSPNIYTYNV 120

Query: 646 LLSCCTEARSPYDMGFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMH-SE 704
           ++    E R   +     E MAV G+   +   +    G    +  D    FL  M  + 
Sbjct: 121 IVEGLCEERKLDEAKKMLEEMAVRGYFPDVVTYNSFIKGLCKCDRVDEARKFLARMPVTP 180

Query: 705 DRESKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAV 746
           D  S       V++ L KSG  + A  + +    +   PD V
Sbjct: 181 DVVS----YTTVINGLCKSGDLDSASRMLDQMTNRGCTPDVV 218


>gi|255660814|gb|ACU25576.1| pentatricopeptide repeat-containing protein [Junellia spathulata]
          Length = 418

 Score =  146 bits (368), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 83/279 (29%), Positives = 152/279 (54%)

Query: 370 LGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPD 429
           L + + F  +    ++ +  G   ++  +N L+HS+ +   +  A  VF  +   G  P 
Sbjct: 111 LMKLKYFKLVWGFYEESLECGYPASLYFFNILMHSFCKEGEIRLAQSVFDAITKWGLRPS 170

Query: 430 RVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFC 489
            V++ TL++ + K G L+    +   MQA+G+ PD +TYSV+IN L K   +  A++LF 
Sbjct: 171 VVSFNTLMNGYIKLGDLNEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFD 230

Query: 490 EMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCG 549
           EM++ G +PN VT+  +I    K      A+++Y+ M +    PD +TY+ ++  L   G
Sbjct: 231 EMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKG 290

Query: 550 YLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCN 609
            L +A+ +  EM  K   PD+  Y  L+D   K G++  A+E+ + M++  +R +     
Sbjct: 291 DLKQAQDLIDEMSMKGLKPDKITYTTLIDGSCKEGDLETAFEYRKIMIKENIRLDDVAYT 350

Query: 610 SLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
           +L+S   + G+  DA  +L+ ML++GLK  + TYT++++
Sbjct: 351 ALISGLCQEGRSVDAEKMLREMLSVGLKLEIGTYTMIIN 389


>gi|222636130|gb|EEE66262.1| hypothetical protein OsJ_22447 [Oryza sativa Japonica Group]
          Length = 876

 Score =  146 bits (368), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 96/321 (29%), Positives = 149/321 (46%), Gaps = 19/321 (5%)

Query: 350 LRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRAN 409
           +  Q G K DEH Y  +   L +A   G   +    +VR G     V Y  LI  + +A 
Sbjct: 442 MMEQNGLKPDEHAYAVLTDALCKA---GRAEEAYSFIVRKGVALTKVYYTTLIDGFSKAG 498

Query: 410 YLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYS 469
             + A  + ++M   GC PD  TY  L+    K   L+ A+ +  +M   G+    F Y+
Sbjct: 499 NTDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRGIKCTIFAYT 558

Query: 470 VIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNA 529
           ++I+ + + G    A +++ EM + G  P+  TY + I    K    + A  L   M+  
Sbjct: 559 ILIDEMLREGKHDHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGRLEDAEDLILKMERE 618

Query: 530 GFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVD--LWGKAGNVR 587
           G  PD VTY+I+++  GH GY+D A +    M   +  P+   Y LL+   L G    VR
Sbjct: 619 GVAPDVVTYNILIDGCGHMGYIDRAFSTLKRMVGASCEPNYWTYCLLLKHLLKGNLAYVR 678

Query: 588 KA--------------WEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLN 633
                           W+  E M++ GL P V T +SL++ F + G+L +A  LL  M  
Sbjct: 679 SVDTSGMWNLIELDITWQLLERMVKHGLNPTVTTYSSLIAGFCKAGRLEEACLLLDHMCG 738

Query: 634 LGLKPSLQTYTLLLSCCTEAR 654
            GL P+   YTLL+ CC + +
Sbjct: 739 KGLSPNEDIYTLLIKCCCDTK 759



 Score =  139 bits (351), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 81/295 (27%), Positives = 156/295 (52%), Gaps = 3/295 (1%)

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
           + GF     T+T ++     A +F    ++ ++M+   C+ ++  + +LI+S  + + L 
Sbjct: 270 KEGFTPTVVTFTNLINGYCMAEKFDDALRMKNKMMSSKCKLDLQVFGKLINSLIKKDRLK 329

Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
           EA ++  ++   G  P+ +TY ++ID + K+G +D+A+++ K M+  G  P+ +TY+ ++
Sbjct: 330 EAKELLNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMMERDGCQPNAWTYNSLM 389

Query: 473 NCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFE 532
             L K   L  A  L  +M   G IPN++TY  ++  Q    ++ +A +L+  M+  G +
Sbjct: 390 YGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDEHDFDNAFRLFEMMEQNGLK 449

Query: 533 PDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEW 592
           PD+  Y+++ + L   G    AE  ++ + RK     +  Y  L+D + KAGN   A   
Sbjct: 450 PDEHAYAVLTDALCKAG---RAEEAYSFIVRKGVALTKVYYTTLIDGFSKAGNTDFAATL 506

Query: 593 YEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
            E M+  G  P+  T + LL A  +  +L++A  +L  M   G+K ++  YT+L+
Sbjct: 507 IERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRGIKCTIFAYTILI 561



 Score =  128 bits (322), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 106/400 (26%), Positives = 179/400 (44%), Gaps = 10/400 (2%)

Query: 350 LRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRAN 409
           L  + G   D+ TY T++  L   +   A  +LL+  V++G  P VVT+  LI+ Y  A 
Sbjct: 233 LMEKNGCHPDDWTYNTLIYGLCDQKTEEA-EELLNNAVKEGFTPTVVTFTNLINGYCMAE 291

Query: 410 YLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYS 469
             ++AL +  +M    C+ D   +  LI+   K   L  A ++  ++ A GL P+  TY+
Sbjct: 292 KFDDALRMKNKMMSSKCKLDLQVFGKLINSLIKKDRLKEAKELLNEISANGLVPNVITYT 351

Query: 470 VIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNA 529
            II+   K+G +  A ++   M   GC PN  TYN ++    K +    A+ L   MQ  
Sbjct: 352 SIIDGYCKSGKVDIALEVLKMMERDGCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKD 411

Query: 530 GFEPDKVTYSIVMEVLGHCGY--LDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVR 587
           G  P+ +TY+ +++  G C     D A  +F  M +    PDE  Y +L D   KAG   
Sbjct: 412 GIIPNVITYTTLLQ--GQCDEHDFDNAFRLFEMMEQNGLKPDEHAYAVLTDALCKAG--- 466

Query: 588 KAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
           +A E Y  +++ G+        +L+  F + G    A  L++ M++ G  P   TY++LL
Sbjct: 467 RAEEAYSFIVRKGVALTKVYYTTLIDGFSKAGNTDFAATLIERMIDEGCTPDSYTYSVLL 526

Query: 648 -SCCTEARSPYDMGFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDR 706
            + C + R    +    + M++ G    +F  ++       +   DH       M S   
Sbjct: 527 HALCKQKRLNEALPILDQ-MSLRGIKCTIFAYTILIDEMLREGKHDHAKRMYNEMTSSGH 585

Query: 707 ESKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAV 746
           +         ++   K G  E+A  +     ++ V PD V
Sbjct: 586 KPSATTYTVFINSYCKEGRLEDAEDLILKMEREGVAPDVV 625



 Score =  108 bits (271), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 98/415 (23%), Positives = 170/415 (40%), Gaps = 38/415 (9%)

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
           Q G   D  TY TM+    +       ++    ++  G +P   T N L+  Y R   L 
Sbjct: 61  QDGLLPDTVTYNTMIKSYCKEGDLTTAHRYFRLLLEGGLEPETFTCNALVLGYCRTGELR 120

Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
           +A  +F  M ++GC+ +  +Y  LI     A  +  A+ ++  M+  G SP+   ++ +I
Sbjct: 121 KACWLFLMMPLMGCQRNEYSYTILIQGLCDAKCVRKALVLFLMMKRDGCSPNVRAFTFLI 180

Query: 473 NCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFE 532
           + L K+G +  A  LF  M   G +P+++TYN MI   +K      ALK+   M+  G  
Sbjct: 181 SGLCKSGRVGDARLLFDAMPQNGVVPSVMTYNAMIVGYSKLGRMNDALKIKELMEKNGCH 240

Query: 533 PDKVTYSIVMEVLGHCGY-LDEAEAVFAEMRRKNWVP----------------------- 568
           PD  TY+ +  + G C    +EAE +     ++ + P                       
Sbjct: 241 PDDWTYNTL--IYGLCDQKTEEAEELLNNAVKEGFTPTVVTFTNLINGYCMAEKFDDALR 298

Query: 569 ------------DEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFL 616
                       D  V+G L++   K   +++A E    +   GL PNV T  S++  + 
Sbjct: 299 MKNKMMSSKCKLDLQVFGKLINSLIKKDRLKEAKELLNEISANGLVPNVITYTSIIDGYC 358

Query: 617 RVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGFCHELMAVSGHPAHMF 676
           + G++  A  +L+ M   G +P+  TY  L+    + +  +        M   G   ++ 
Sbjct: 359 KSGKVDIALEVLKMMERDGCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVI 418

Query: 677 LLSMPSPGPDGQNVRDHVGSFLEMMHSEDRESKRGLVDAVVDFLHKSGLKEEAGS 731
             +    G   ++  D+     EMM     +        + D L K+G  EEA S
Sbjct: 419 TYTTLLQGQCDEHDFDNAFRLFEMMEQNGLKPDEHAYAVLTDALCKAGRAEEAYS 473



 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 71/259 (27%), Positives = 115/259 (44%), Gaps = 16/259 (6%)

Query: 354 AGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNE 413
           +G K    TYT  +    +  +      L+ +M R+G  P+VVTYN LI   G   Y++ 
Sbjct: 583 SGHKPSATTYTVFINSYCKEGRLEDAEDLILKMEREGVAPDVVTYNILIDGCGHMGYIDR 642

Query: 414 ALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGF----------------LDVAMDMYKKMQ 457
           A    K+M    CEP+  TYC L+    K                   LD+   + ++M 
Sbjct: 643 AFSTLKRMVGASCEPNYWTYCLLLKHLLKGNLAYVRSVDTSGMWNLIELDITWQLLERMV 702

Query: 458 AAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQ 517
             GL+P   TYS +I    KAG L+ A  L   M  +G  PN   Y ++I      + ++
Sbjct: 703 KHGLNPTVTTYSSLIAGFCKAGRLEEACLLLDHMCGKGLSPNEDIYTLLIKCCCDTKFFE 762

Query: 518 SALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLV 577
            AL     M   GF+P   +Y +++  L + G  ++ +++F ++    +  DE  + +L 
Sbjct: 763 KALSFVSIMSECGFQPQLESYRLLVVGLCNEGDFEKVKSLFCDLLELGYNHDEVAWKILN 822

Query: 578 DLWGKAGNVRKAWEWYEAM 596
           D   KAG V   ++    M
Sbjct: 823 DGLLKAGYVDICFQMLSIM 841



 Score =  105 bits (261), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 78/324 (24%), Positives = 125/324 (38%), Gaps = 51/324 (15%)

Query: 363 YTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQ 422
           YTT++    +A        L+++M+ +GC P+  TY+ L+H+  +   LNEAL +  QM 
Sbjct: 487 YTTLIDGFSKAGNTDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMS 546

Query: 423 VVGCE-----------------------------------PDRVTYCTLIDIHAKAGFLD 447
           + G +                                   P   TY   I+ + K G L+
Sbjct: 547 LRGIKCTIFAYTILIDEMLREGKHDHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGRLE 606

Query: 448 VAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMI 507
            A D+  KM+  G++PD  TY+++I+  G  G++  A      MV   C PN  TY +++
Sbjct: 607 DAEDLILKMEREGVAPDVVTYNILIDGCGHMGYIDRAFSTLKRMVGASCEPNYWTYCLLL 666

Query: 508 ALQAKAR----------------NYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYL 551
               K                        +L   M   G  P   TYS ++      G L
Sbjct: 667 KHLLKGNLAYVRSVDTSGMWNLIELDITWQLLERMVKHGLNPTVTTYSSLIAGFCKAGRL 726

Query: 552 DEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSL 611
           +EA  +   M  K   P+E +Y LL+          KA  +   M + G +P + +   L
Sbjct: 727 EEACLLLDHMCGKGLSPNEDIYTLLIKCCCDTKFFEKALSFVSIMSECGFQPQLESYRLL 786

Query: 612 LSAFLRVGQLSDAYHLLQGMLNLG 635
           +      G       L   +L LG
Sbjct: 787 VVGLCNEGDFEKVKSLFCDLLELG 810



 Score = 94.0 bits (232), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 69/251 (27%), Positives = 116/251 (46%), Gaps = 1/251 (0%)

Query: 398 YNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQ 457
           YN  + S  R +       V+ Q+   G  PD VTY T+I  + K G L  A   ++ + 
Sbjct: 36  YNFALRSLARFDMTEYMGRVYSQLVQDGLLPDTVTYNTMIKSYCKEGDLTTAHRYFRLLL 95

Query: 458 AAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQ 517
             GL P+TFT + ++    + G L+ A  LF  M   GC  N  +Y I+I     A+  +
Sbjct: 96  EGGLEPETFTCNALVLGYCRTGELRKACWLFLMMPLMGCQRNEYSYTILIQGLCDAKCVR 155

Query: 518 SALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLV 577
            AL L+  M+  G  P+   ++ ++  L   G + +A  +F  M +   VP    Y  ++
Sbjct: 156 KALVLFLMMKRDGCSPNVRAFTFLISGLCKSGRVGDARLLFDAMPQNGVVPSVMTYNAMI 215

Query: 578 DLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLK 637
             + K G +  A +  E M + G  P+  T N+L+       +  +A  LL   +  G  
Sbjct: 216 VGYSKLGRMNDALKIKELMEKNGCHPDDWTYNTLIYGLCD-QKTEEAEELLNNAVKEGFT 274

Query: 638 PSLQTYTLLLS 648
           P++ T+T L++
Sbjct: 275 PTVVTFTNLIN 285



 Score = 75.9 bits (185), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 61/216 (28%), Positives = 101/216 (46%), Gaps = 7/216 (3%)

Query: 460 GLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSA 519
            LSP  + ++  +  L +    +   +++ ++V  G +P+ VTYN MI    K  +  +A
Sbjct: 30  ALSPKCYNFA--LRSLARFDMTEYMGRVYSQLVQDGLLPDTVTYNTMIKSYCKEGDLTTA 87

Query: 520 LKLYRDMQNAGFEPDKVTYSIVMEVLGHC--GYLDEAEAVFAEMRRKNWVPDEPVYGLLV 577
            + +R +   G EP+  T + +  VLG+C  G L +A  +F  M       +E  Y +L+
Sbjct: 88  HRYFRLLLEGGLEPETFTCNAL--VLGYCRTGELRKACWLFLMMPLMGCQRNEYSYTILI 145

Query: 578 DLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLK 637
                A  VRKA   +  M + G  PNV     L+S   + G++ DA  L   M   G+ 
Sbjct: 146 QGLCDAKCVRKALVLFLMMKRDGCSPNVRAFTFLISGLCKSGRVGDARLLFDAMPQNGVV 205

Query: 638 PSLQTYTLLLSCCTEARSPYDMGFCHELMAVSG-HP 672
           PS+ TY  ++   ++     D     ELM  +G HP
Sbjct: 206 PSVMTYNAMIVGYSKLGRMNDALKIKELMEKNGCHP 241


>gi|297738031|emb|CBI27232.3| unnamed protein product [Vitis vinifera]
          Length = 660

 Score =  146 bits (368), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 97/332 (29%), Positives = 154/332 (46%), Gaps = 37/332 (11%)

Query: 362 TYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQM 421
           T+  ++  L +      + KL+D M   GC PN VTYN +I+       L++A+ +  +M
Sbjct: 260 TFNVLINGLCKKGDMVRVTKLVDNMFLKGCVPNEVTYNTIINGLCLKGKLDKAVSLLDRM 319

Query: 422 QVVGCEPDRVTYCTLIDIHAKAG-------FL---------------------------- 446
               C P+ VTY TLI+   K G        L                            
Sbjct: 320 VASKCVPNDVTYGTLINGLVKQGRSVDGVHLLSSLEERGHHANEYAYSTLISGLFKEEKS 379

Query: 447 DVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIM 506
           + AM ++KKM   G  P+   YS +I+ L + G L  A ++ CEMVN+GC PN  TY+ +
Sbjct: 380 EEAMGLWKKMVEKGCQPNIVVYSALIDGLCREGKLDEAKEILCEMVNKGCTPNAFTYSSL 439

Query: 507 IALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNW 566
           I    K  N Q A++++++M      P+++ YS+++  L   G L EA  ++  M  +  
Sbjct: 440 IKGFFKTGNSQKAIRVWKEMAKNNCVPNEICYSVLIHGLCEDGKLREAMMMWTHMLGRGL 499

Query: 567 VPDEPVYGLLVDLWGKAGNVRKAWEWYEAML--QAGLRPNVPTCNSLLSAFLRVGQLSDA 624
            PD   Y  ++     AG+V    + +  ML  ++  +P+V T N LL A  +   +S A
Sbjct: 500 RPDVVAYSSMIHGLCNAGSVEVGLKLFNEMLCQESDSQPDVVTYNILLRALCKQNSISHA 559

Query: 625 YHLLQGMLNLGLKPSLQTYTLLLSCCTEARSP 656
             LL  ML+ G  P L T  + L+   E  +P
Sbjct: 560 IDLLNSMLDRGCNPDLITCNIFLNALREKLNP 591



 Score =  132 bits (331), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 94/331 (28%), Positives = 153/331 (46%), Gaps = 2/331 (0%)

Query: 319 GNTNYSMDAYQANQVLKQLQDHTVALGFFNWLRRQAGFKH--DEHTYTTMVGILGRARQF 376
           G TN S +    N V+K +    +        R  A  K   D  TY T++  L +  + 
Sbjct: 180 GKTNISPNVLSFNLVIKAMCKLGLVDRAIEVFREMAIQKCEPDVFTYCTLMDGLCKEDRI 239

Query: 377 GAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTL 436
                LLD+M  +GC P+ VT+N LI+   +   +     +   M + GC P+ VTY T+
Sbjct: 240 DEAVLLLDEMQIEGCFPSSVTFNVLINGLCKKGDMVRVTKLVDNMFLKGCVPNEVTYNTI 299

Query: 437 IDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGC 496
           I+     G LD A+ +  +M A+   P+  TY  +IN L K G       L   +  +G 
Sbjct: 300 INGLCLKGKLDKAVSLLDRMVASKCVPNDVTYGTLINGLVKQGRSVDGVHLLSSLEERGH 359

Query: 497 IPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEA 556
             N   Y+ +I+   K    + A+ L++ M   G +P+ V YS +++ L   G LDEA+ 
Sbjct: 360 HANEYAYSTLISGLFKEEKSEEAMGLWKKMVEKGCQPNIVVYSALIDGLCREGKLDEAKE 419

Query: 557 VFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFL 616
           +  EM  K   P+   Y  L+  + K GN +KA   ++ M +    PN    + L+    
Sbjct: 420 ILCEMVNKGCTPNAFTYSSLIKGFFKTGNSQKAIRVWKEMAKNNCVPNEICYSVLIHGLC 479

Query: 617 RVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
             G+L +A  +   ML  GL+P +  Y+ ++
Sbjct: 480 EDGKLREAMMMWTHMLGRGLRPDVVAYSSMI 510



 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 74/265 (27%), Positives = 123/265 (46%), Gaps = 37/265 (13%)

Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
           + G   +E+ Y+T++  L +  +      L  +MV  GCQPN+V Y+ LI    R   L+
Sbjct: 356 ERGHHANEYAYSTLISGLFKEEKSEEAMGLWKKMVEKGCQPNIVVYSALIDGLCREGKLD 415

Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
           EA ++  +M   GC P+  TY +LI    K G    A+ ++K+M      P+   YSV+I
Sbjct: 416 EAKEILCEMVNKGCTPNAFTYSSLIKGFFKTGNSQKAIRVWKEMAKNNCVPNEICYSVLI 475

Query: 473 NCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDM--QNAG 530
           + L + G L+ A  ++  M+ +G  P++V Y+ MI     A + +  LKL+ +M  Q + 
Sbjct: 476 HGLCEDGKLREAMMMWTHMLGRGLRPDVVAYSSMIHGLCNAGSVEVGLKLFNEMLCQESD 535

Query: 531 FEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAW 590
            +PD VTY+I++  L                                    K  ++  A 
Sbjct: 536 SQPDVVTYNILLRAL-----------------------------------CKQNSISHAI 560

Query: 591 EWYEAMLQAGLRPNVPTCNSLLSAF 615
           +   +ML  G  P++ TCN  L+A 
Sbjct: 561 DLLNSMLDRGCNPDLITCNIFLNAL 585



 Score =  102 bits (255), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 84/405 (20%), Positives = 180/405 (44%), Gaps = 5/405 (1%)

Query: 346 FFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSY 405
            F    +   +K  + T+ +++     +  FG + ++ D+M R+        +  +  +Y
Sbjct: 66  IFKSASQMGSYKSGDSTFYSLIENYANSGDFGTLFQVFDRMKRERRVFIEKNFILVFRAY 125

Query: 406 GRANYLNEALDVFKQM-QVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAA--GLS 462
           G+A+   +A+++F +M     C     ++ +++++  + G    A++ Y+        +S
Sbjct: 126 GKAHLPEKAIELFGRMVDEFQCRRTVRSFNSVLNVIIQEGLFHRALEFYECGVGGKTNIS 185

Query: 463 PDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKL 522
           P+  +++++I  + K G +  A ++F EM  Q C P++ TY  ++    K      A+ L
Sbjct: 186 PNVLSFNLVIKAMCKLGLVDRAIEVFREMAIQKCEPDVFTYCTLMDGLCKEDRIDEAVLL 245

Query: 523 YRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGK 582
             +MQ  G  P  VT+++++  L   G +     +   M  K  VP+E  Y  +++    
Sbjct: 246 LDEMQIEGCFPSSVTFNVLINGLCKKGDMVRVTKLVDNMFLKGCVPNEVTYNTIINGLCL 305

Query: 583 AGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQT 642
            G + KA    + M+ +   PN  T  +L++  ++ G+  D  HLL  +   G   +   
Sbjct: 306 KGKLDKAVSLLDRMVASKCVPNDVTYGTLINGLVKQGRSVDGVHLLSSLEERGHHANEYA 365

Query: 643 YTLLLS-CCTEARSPYDMGFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMM 701
           Y+ L+S    E +S   MG   +++     P ++ + S    G   +   D     L  M
Sbjct: 366 YSTLISGLFKEEKSEEAMGLWKKMVEKGCQP-NIVVYSALIDGLCREGKLDEAKEILCEM 424

Query: 702 HSEDRESKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAV 746
            ++          +++    K+G  ++A  VW+  A+ N  P+ +
Sbjct: 425 VNKGCTPNAFTYSSLIKGFFKTGNSQKAIRVWKEMAKNNCVPNEI 469


  Database: nr
    Posted date:  Mar 3, 2013 10:45 PM
  Number of letters in database: 999,999,864
  Number of sequences in database:  2,912,245
  
  Database: /local_scratch/syshi//blastdatabase/nr.01
    Posted date:  Mar 3, 2013 10:52 PM
  Number of letters in database: 999,999,666
  Number of sequences in database:  2,912,720
  
  Database: /local_scratch/syshi//blastdatabase/nr.02
    Posted date:  Mar 3, 2013 10:58 PM
  Number of letters in database: 999,999,938
  Number of sequences in database:  3,014,250
  
  Database: /local_scratch/syshi//blastdatabase/nr.03
    Posted date:  Mar 3, 2013 11:03 PM
  Number of letters in database: 999,999,780
  Number of sequences in database:  2,805,020
  
  Database: /local_scratch/syshi//blastdatabase/nr.04
    Posted date:  Mar 3, 2013 11:08 PM
  Number of letters in database: 999,999,551
  Number of sequences in database:  2,816,253
  
  Database: /local_scratch/syshi//blastdatabase/nr.05
    Posted date:  Mar 3, 2013 11:13 PM
  Number of letters in database: 999,999,897
  Number of sequences in database:  2,981,387
  
  Database: /local_scratch/syshi//blastdatabase/nr.06
    Posted date:  Mar 3, 2013 11:18 PM
  Number of letters in database: 999,999,649
  Number of sequences in database:  2,911,476
  
  Database: /local_scratch/syshi//blastdatabase/nr.07
    Posted date:  Mar 3, 2013 11:24 PM
  Number of letters in database: 999,999,452
  Number of sequences in database:  2,920,260
  
  Database: /local_scratch/syshi//blastdatabase/nr.08
    Posted date:  Mar 3, 2013 11:25 PM
  Number of letters in database: 64,230,274
  Number of sequences in database:  189,558
  
Lambda     K      H
   0.319    0.132    0.397 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,307,971,473
Number of Sequences: 23463169
Number of extensions: 555263416
Number of successful extensions: 1593650
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 9040
Number of HSP's successfully gapped in prelim test: 3914
Number of HSP's that attempted gapping in prelim test: 1386774
Number of HSP's gapped (non-prelim): 81138
length of query: 856
length of database: 8,064,228,071
effective HSP length: 152
effective length of query: 704
effective length of database: 8,792,793,679
effective search space: 6190126750016
effective search space used: 6190126750016
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 82 (36.2 bits)