BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 003028
(856 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9SSF9|PP123_ARATH Pentatricopeptide repeat-containing protein At1g74750
OS=Arabidopsis thaliana GN=At1g74750 PE=2 SV=1
Length = 855
Score = 1196 bits (3093), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 589/877 (67%), Positives = 689/877 (78%), Gaps = 43/877 (4%)
Query: 1 MLRAKHITNLSSTARSFFLNGSRCSASDGSSCTCSEDETCVSRRQH-NAQMVYTPARAGV 59
M+RAKHI+NLSS+ARSFFL+GSR SA+DG+SCTC+EDE+ VS+RQ ++V T RA
Sbjct: 1 MIRAKHISNLSSSARSFFLSGSRPSAADGNSCTCAEDESGVSKRQQIRTEVVQTGKRASN 60
Query: 60 VVSGEAAKAAGLQKSERVSVP-----------------SPSSLGRSDHVSYASSVDAVPK 102
+ +G A ++ + + VP SP+ G++D V++AS++ + +
Sbjct: 61 LAAGLAGSILPVEAGKPLVVPKTVEHFTRPSLLPQHVSSPALPGKADSVNHASAI--IKE 118
Query: 103 DVLTSSPISDQFVKAGVAAVCFLSDLVNYKLPALDGSGTANSPTNFMVDPTRPLSNIKPA 162
DV PI DQ KAG+ V LSD+ NYK+P DG+ P + MVDPTRP+S +K +
Sbjct: 119 DV--GVPIGDQIFKAGIGNVNLLSDIANYKIPLSDGTEVVGLPKSCMVDPTRPISGVKSS 176
Query: 163 NVKTIRRENVSKVYPNSSAESTVGSNPSTGYHNAKDKGDNSNIARRFKRVSNASNGTSLE 222
NVK IRRE+++KVYP S+ + S+P T K+ SN G S E
Sbjct: 177 NVKVIRREHLAKVYPRSADRVPINSSPGT------------------KQASNDVAGKSFE 218
Query: 223 THNVSSDN-SDRRRIVQPRSKAHSNRLNSN-FKSNLQPSDAKVVECVSERFSKPSREM-K 279
H++ S+N S +R+I+ R S R S ++ SD + + E F KPSREM K
Sbjct: 219 AHDLLSNNVSGKRKIMPQRPYTDSTRYASGGCDYSVHSSDDRTIISSVEGFGKPSREMMK 278
Query: 280 IPAGLAPFSRHFASTGNVVESVSRILRQWKWGPLAEEALGNTNYSMDAYQANQVLKQLQD 339
+ AP R + G VVE+VS ILR++KWG AEEAL N + MDAYQANQVLKQ+ +
Sbjct: 279 VTPRTAPTPRQHCNPGYVVENVSSILRRFKWGHAAEEALHNFGFRMDAYQANQVLKQMDN 338
Query: 340 HTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYN 399
+ ALGFF WL+RQ GFKHD HTYTTMVG LGRA+QFG INKLLD+MVRDGC+PN VTYN
Sbjct: 339 YANALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGEINKLLDEMVRDGCKPNTVTYN 398
Query: 400 RLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAA 459
RLIHSYGRANYL EA++VF QMQ GCEPDRVTYCTLIDIHAKAGFLD+AMDMY++MQ A
Sbjct: 399 RLIHSYGRANYLKEAMNVFNQMQEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQEA 458
Query: 460 GLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSA 519
GLSPDTFTYSVIINCLGKAGHL AAH+LFCEMV QGC PNLVT+NIMIAL AKARNY++A
Sbjct: 459 GLSPDTFTYSVIINCLGKAGHLPAAHRLFCEMVGQGCTPNLVTFNIMIALHAKARNYETA 518
Query: 520 LKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDL 579
LKLYRDMQNAGF+PDKVTYSIVMEVLGHCG+L+EAE VFAEM+RKNWVPDEPVYGLLVDL
Sbjct: 519 LKLYRDMQNAGFQPDKVTYSIVMEVLGHCGFLEEAEGVFAEMQRKNWVPDEPVYGLLVDL 578
Query: 580 WGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPS 639
WGKAGNV KAW+WY+AMLQAGLRPNVPTCNSLLS FLRV ++S+AY+LLQ ML LGL PS
Sbjct: 579 WGKAGNVDKAWQWYQAMLQAGLRPNVPTCNSLLSTFLRVHRMSEAYNLLQSMLALGLHPS 638
Query: 640 LQTYTLLLSCCTEARSPYDMGFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLE 699
LQTYTLLLSCCT+ARS +DMGFC +LMAVSGHPAHMFLL MP GPDGQ VRDHV +FL+
Sbjct: 639 LQTYTLLLSCCTDARSNFDMGFCGQLMAVSGHPAHMFLLKMPPAGPDGQKVRDHVSNFLD 698
Query: 700 MMHSEDRESKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAVKEKGMSYWLINLH 759
MHSEDRESKRGL+DAVVDFLHKSGLKEEAGSVWEVAA KNVYPDA++EK SYWLINLH
Sbjct: 699 FMHSEDRESKRGLMDAVVDFLHKSGLKEEAGSVWEVAAGKNVYPDALREKSYSYWLINLH 758
Query: 760 VMSDGTAVIALSRTLAWFRKQMLISGVGPSRIDIVTGWGRRSRVTGTSLVRQAVQELLHM 819
VMS+GTAVIALSRTLAWFRKQML+SG PSRIDIVTGWGRRSRVTGTS+VRQAV+ELL++
Sbjct: 759 VMSEGTAVIALSRTLAWFRKQMLVSGDCPSRIDIVTGWGRRSRVTGTSMVRQAVEELLNI 818
Query: 820 FSFPFFTENGNSGCFVGCGEPLNKWLLQSYVDRMHLL 856
F+FPFFTENGNSGCFVG GEPL WLL+SYV+RMHLL
Sbjct: 819 FNFPFFTENGNSGCFVGSGEPLKNWLLESYVERMHLL 855
>sp|Q8GYP6|PPR49_ARATH Pentatricopeptide repeat-containing protein At1g18900
OS=Arabidopsis thaliana GN=At1g18900 PE=1 SV=1
Length = 860
Score = 1183 bits (3061), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 587/884 (66%), Positives = 692/884 (78%), Gaps = 52/884 (5%)
Query: 1 MLRAKHITNLSSTARSFFLNGSRCSASDGSSCTCSEDETCVSRRQH-----------NAQ 49
M+RAKHI+NLSSTARSFFLNGSR S +DG+SC S+DE CVS+RQ +
Sbjct: 1 MIRAKHISNLSSTARSFFLNGSRTSVTDGNSCVYSDDENCVSKRQQLRKEAGQTEKRPSS 60
Query: 50 MVYTPARAGVVVSGEAAKAAGLQKSERVSVPS---------PSSLGRSDHVSYASSVDAV 100
++ P+ G ++ GE K +K + PS P+ +S V+YAS+V V
Sbjct: 61 ILPKPSVVGCILPGEVTKPVVPKKVDDFGRPSLLPQHVSSSPALPLKSHSVNYASTV--V 118
Query: 101 PKDV---LTSSPISDQFVKAGVAAVCFLSDLVNYKLPALDGSGTA-NSPTNFMVDPTRPL 156
++V +S PI DQ KAG+ AV FLSDL N K+P+ DG A P + MVDPTRP+
Sbjct: 119 REEVEGKASSEPIGDQIFKAGIVAVNFLSDLSNCKIPSYDGGSDAFGLPKSCMVDPTRPI 178
Query: 157 SNIKPANVKTIRRENVSKVYPNSSA-ESTVGS--NPSTGYHNAKDKGDNSNIARRFKRVS 213
S++K +NVK IRRE+ +K+YP S+A ES+VG+ NPS+ + AK+ + + + F++VS
Sbjct: 179 SSVKSSNVKAIRREHFAKIYPRSAAKESSVGTTRNPSSNFRGAKE-AERTGFVKGFRQVS 237
Query: 214 NASNGTSLETHNVSSDNSDRRRIVQPRSKAHSNRLNSNFKSNLQPSDAKVVECVSERFSK 273
N+ G SL T N + +R V R SNR V FS
Sbjct: 238 NSVVGKSLPTTN---NTYGKRTSVLQRPHIDSNRF------------------VPSGFSN 276
Query: 274 PSREM-KIPAGLAPFSRHFASTGNVVESVSRILRQWKWGPLAEEALGNTNYSMDAYQANQ 332
S EM K P+G A SR + ++G++VE+VS +LR+++WGP AEEAL N +DAYQANQ
Sbjct: 277 SSVEMMKGPSGTALTSRQYCNSGHIVENVSSVLRRFRWGPAAEEALQNLGLRIDAYQANQ 336
Query: 333 VLKQLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQ 392
VLKQ+ D+ ALGFF WL+RQ GFKHD HTYTTMVG LGRA+QFGAINKLLD+MVRDGCQ
Sbjct: 337 VLKQMNDYGNALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQ 396
Query: 393 PNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDM 452
PN VTYNRLIHSYGRANYLNEA++VF QMQ GC+PDRVTYCTLIDIHAKAGFLD+AMDM
Sbjct: 397 PNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDM 456
Query: 453 YKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAK 512
Y++MQA GLSPDTFTYSVIINCLGKAGHL AAH+LFCEMV+QGC PNLVTYNIM+ L AK
Sbjct: 457 YQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAK 516
Query: 513 ARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPV 572
ARNYQ+ALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYL+EAEAVF EM++KNW+PDEPV
Sbjct: 517 ARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPV 576
Query: 573 YGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGML 632
YGLLVDLWGKAGNV KAW+WY+AML AGLRPNVPTCNSLLS FLRV ++++AY LLQ ML
Sbjct: 577 YGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNML 636
Query: 633 NLGLKPSLQTYTLLLSCCTEARSPYDMGFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRD 692
LGL+PSLQTYTLLLSCCT+ RS DMGFC +LMA +GHPAHMFLL MP+ GPDG+NVR+
Sbjct: 637 ALGLRPSLQTYTLLLSCCTDGRSKLDMGFCGQLMASTGHPAHMFLLKMPAAGPDGENVRN 696
Query: 693 HVGSFLEMMHSEDRESKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAVKEKGMS 752
H +FL++MHSEDRESKRGLVDAVVDFLHKSG KEEAGSVWEVAAQKNV+PDA++EK S
Sbjct: 697 HANNFLDLMHSEDRESKRGLVDAVVDFLHKSGQKEEAGSVWEVAAQKNVFPDALREKSCS 756
Query: 753 YWLINLHVMSDGTAVIALSRTLAWFRKQMLISGVGPSRIDIVTGWGRRSRVTGTSLVRQA 812
YWLINLHVMS+GTAV ALSRTLAWFRKQML SG PSRIDIVTGWGRRSRVTGTS+VRQA
Sbjct: 757 YWLINLHVMSEGTAVTALSRTLAWFRKQMLASGTCPSRIDIVTGWGRRSRVTGTSMVRQA 816
Query: 813 VQELLHMFSFPFFTENGNSGCFVGCGEPLNKWLLQSYVDRMHLL 856
V+ELL++F PFFTE+GNSGCFVG GEPLN+WLLQS+V+RMHLL
Sbjct: 817 VEELLNIFGSPFFTESGNSGCFVGSGEPLNRWLLQSHVERMHLL 860
>sp|Q9SAK0|PP132_ARATH Pentatricopeptide repeat-containing protein At1g79490,
mitochondrial OS=Arabidopsis thaliana GN=EMB2217 PE=2
SV=1
Length = 836
Score = 190 bits (483), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 124/440 (28%), Positives = 219/440 (49%), Gaps = 3/440 (0%)
Query: 359 DEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVF 418
D TY ++ L ++ + A KL QM +P+ ++ L+ S G+A L+ ++ V+
Sbjct: 312 DGSTYELIIPSLAKSGRLDAAFKLFQQMKERKLRPSFSVFSSLVDSMGKAGRLDTSMKVY 371
Query: 419 KQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKA 478
+MQ G P + +LID +AKAG LD A+ ++ +M+ +G P+ Y++II K+
Sbjct: 372 MEMQGFGHRPSATMFVSLIDSYAKAGKLDTALRLWDEMKKSGFRPNFGLYTMIIESHAKS 431
Query: 479 GHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTY 538
G L+ A +F +M G +P TY+ ++ + A + SA+K+Y M NAG P +Y
Sbjct: 432 GKLEVAMTVFKDMEKAGFLPTPSTYSCLLEMHAGSGQVDSAMKIYNSMTNAGLRPGLSSY 491
Query: 539 SIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQ 598
++ +L + +D A + EM+ + D +L+ ++ K +V A +W M
Sbjct: 492 ISLLTLLANKRLVDVAGKILLEMKAMGYSVDVCASDVLM-IYIKDASVDLALKWLRFMGS 550
Query: 599 AGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYD 658
+G++ N L + ++ G A LL+ +++ K L YT +L+ +
Sbjct: 551 SGIKTNNFIIRQLFESCMKNGLYDSARPLLETLVHSAGKVDLVLYTSILAHLVRCQDEDK 610
Query: 659 MGFCHELMAVSGHPAHMFLLSM-PSPGPDGQNVRDHVGSFLEMMHSEDRE-SKRGLVDAV 716
+++ + H AH F+ + P Q V V F + + E E + R V+ +
Sbjct: 611 ERQLMSILSATKHKAHAFMCGLFTGPEQRKQPVLTFVREFYQGIDYELEEGAARYFVNVL 670
Query: 717 VDFLHKSGLKEEAGSVWEVAAQKNVYPDAVKEKGMSYWLINLHVMSDGTAVIALSRTLAW 776
+++L G A VW+VA + ++P A+ W +++ +S G A+IA+ TL
Sbjct: 671 LNYLVLMGQINRARCVWKVAYENKLFPKAIVFDQHIAWSLDVRNLSVGAALIAVVHTLHR 730
Query: 777 FRKQMLISGVGPSRIDIVTG 796
FRK+ML GV P RI +VTG
Sbjct: 731 FRKRMLYYGVVPRRIKLVTG 750
Score = 170 bits (430), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 102/366 (27%), Positives = 172/366 (46%), Gaps = 7/366 (1%)
Query: 292 ASTGNVVESVSRILRQWKWGPLAEEALGNTNYSMDAYQANQVLKQLQDHTVALGFFNWLR 351
+S +VE V R WKWGP E L + + Q LK +++ AL F W +
Sbjct: 141 SSVAKIVEVVQR----WKWGPELETQLDKLQFVPNMVHITQSLKIVKEVDAALSLFRWAK 196
Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVT---YNRLIHSYGRA 408
+Q + + Y + L + R F I L ++MV+D ++ YN++I +A
Sbjct: 197 KQPWYLPSDECYVVLFDGLNQGRDFVGIQSLFEEMVQDSSSHGDLSFNAYNQVIQYLAKA 256
Query: 409 NYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTY 468
L A FK+ Q GC+ D TY L+ + G A ++Y+ M+ D TY
Sbjct: 257 EKLEVAFCCFKKAQESGCKIDTQTYNNLMMLFLNKGLPYKAFEIYESMEKTDSLLDGSTY 316
Query: 469 SVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQN 528
+II L K+G L AA +LF +M + P+ ++ ++ KA +++K+Y +MQ
Sbjct: 317 ELIIPSLAKSGRLDAAFKLFQQMKERKLRPSFSVFSSLVDSMGKAGRLDTSMKVYMEMQG 376
Query: 529 AGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRK 588
G P + +++ G LD A ++ EM++ + P+ +Y ++++ K+G +
Sbjct: 377 FGHRPSATMFVSLIDSYAKAGKLDTALRLWDEMKKSGFRPNFGLYTMIIESHAKSGKLEV 436
Query: 589 AWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
A ++ M +AG P T + LL GQ+ A + M N GL+P L +Y LL+
Sbjct: 437 AMTVFKDMEKAGFLPTPSTYSCLLEMHAGSGQVDSAMKIYNSMTNAGLRPGLSSYISLLT 496
Query: 649 CCTEAR 654
R
Sbjct: 497 LLANKR 502
Score = 54.7 bits (130), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/231 (22%), Positives = 90/231 (38%), Gaps = 38/231 (16%)
Query: 355 GFKH--DEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
GF H + +++ +A + +L D+M + G +PN Y +I S+ ++ L
Sbjct: 376 GFGHRPSATMFVSLIDSYAKAGKLDTALRLWDEMKKSGFRPNFGLYTMIIESHAKSGKLE 435
Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYK------------------ 454
A+ VFK M+ G P TY L+++HA +G +D AM +Y
Sbjct: 436 VAMTVFKDMEKAGFLPTPSTYSCLLEMHAGSGQVDSAMKIYNSMTNAGLRPGLSSYISLL 495
Query: 455 -----------------KMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCI 497
+M+A G S D V++ + K + A + M + G
Sbjct: 496 TLLANKRLVDVAGKILLEMKAMGYSVDVCASDVLMIYI-KDASVDLALKWLRFMGSSGIK 554
Query: 498 PNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHC 548
N + K Y SA L + ++ + D V Y+ ++ L C
Sbjct: 555 TNNFIIRQLFESCMKNGLYDSARPLLETLVHSAGKVDLVLYTSILAHLVRC 605
>sp|Q9SIC9|PP178_ARATH Pentatricopeptide repeat-containing protein At2g31400,
chloroplastic OS=Arabidopsis thaliana GN=At2g31400 PE=2
SV=1
Length = 918
Score = 189 bits (480), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 135/542 (24%), Positives = 246/542 (45%), Gaps = 68/542 (12%)
Query: 356 FKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEAL 415
+ D +Y T++ + + Q ++L QM PNVV+Y+ +I + +A +EAL
Sbjct: 370 IEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEAL 429
Query: 416 DVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCL 475
++F +M+ +G DRV+Y TL+ I+ K G + A+D+ ++M + G+ D TY+ ++
Sbjct: 430 NLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGY 489
Query: 476 GKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDK 535
GK G ++F EM + +PNL+TY+ +I +K Y+ A++++R+ ++AG D
Sbjct: 490 GKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADV 549
Query: 536 VTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEA 595
V YS +++ L G + A ++ EM ++ P+ Y ++D +G++ + ++ ++
Sbjct: 550 VLYSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSIIDAFGRSATMDRSADYSNG 609
Query: 596 MLQAGLRPNVPTCNSLLSAFLRV---------GQLSDA-------------------YHL 627
++P +S LSA GQL+ +
Sbjct: 610 -------GSLPFSSSALSALTETEGNRVIQLFGQLTTESNNRTTKDCEEGMQELSCILEV 662
Query: 628 LQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGFCHELMAVSGHP----AHMFLLSMPSP 683
+ M L +KP++ T++ +L+ C+ S D E + + + H L+
Sbjct: 663 FRKMHQLEIKPNVVTFSAILNACSRCNSFEDASMLLEELRLFDNKVYGVVHGLLMGQR-- 720
Query: 684 GPDGQNVRDHVGSFLEMMHSEDRESKRGLVDAVVDFLHKSGLKEEAG---------SVWE 734
+NV S + ++ D + +A+ D L G K A VWE
Sbjct: 721 ----ENVWLQAQSLFDKVNEMDGSTASAFYNALTDMLWHFGQKRGAELVALEGRSRQVWE 776
Query: 735 VAAQKNVYPDAVKEKGMSYWLINLHVMSDGTAVIALSRTLAWFRKQMLISGVGPSRIDIV 794
NV+ D+ ++LH+MS G A + L R + P + I+
Sbjct: 777 -----NVWSDSC---------LDLHLMSSGAARAMVHAWLLNIRSIVYEGHELPKVLSIL 822
Query: 795 TGWGRRSRVTGTSLVRQAVQELLHMFSFPFFTENGNSGCFVGCGEPLNKWLLQSYVDRMH 854
TGWG+ S+V G +R+AV+ LL PF N G F G + WL +S ++
Sbjct: 823 TGWGKHSKVVGDGALRRAVEVLLRGMDAPFHLSKCNMGRFTSSGSVVATWLRESATLKLL 882
Query: 855 LL 856
+L
Sbjct: 883 IL 884
Score = 167 bits (424), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 98/330 (29%), Positives = 169/330 (51%), Gaps = 4/330 (1%)
Query: 319 GNTNYSMDAYQANQVLKQLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRA-RQFG 377
GNT Y+ A + L H A+ FN ++ + G + + TY ++ G+ +F
Sbjct: 265 GNTVYAFSALISAYGRSGL--HEEAISVFNSMK-EYGLRPNLVTYNAVIDACGKGGMEFK 321
Query: 378 AINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLI 437
+ K D+M R+G QP+ +T+N L+ R A ++F +M E D +Y TL+
Sbjct: 322 QVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLL 381
Query: 438 DIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCI 497
D K G +D+A ++ +M + P+ +YS +I+ KAG A LF EM G
Sbjct: 382 DAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIA 441
Query: 498 PNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAV 557
+ V+YN ++++ K + AL + R+M + G + D VTY+ ++ G G DE + V
Sbjct: 442 LDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKV 501
Query: 558 FAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLR 617
F EM+R++ +P+ Y L+D + K G ++A E + AGLR +V ++L+ A +
Sbjct: 502 FTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCK 561
Query: 618 VGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
G + A L+ M G+ P++ TY ++
Sbjct: 562 NGLVGSAVSLIDEMTKEGISPNVVTYNSII 591
Score = 102 bits (253), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 78/313 (24%), Positives = 135/313 (43%), Gaps = 3/313 (0%)
Query: 436 LIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQG 495
+I + G + +A +++ A G + +S +I+ G++G + A +F M G
Sbjct: 239 MISTLGRYGKVTIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKEYG 298
Query: 496 CIPNLVTYNIMI-ALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEA 554
PNLVTYN +I A ++ K + +MQ G +PD++T++ ++ V G + A
Sbjct: 299 LRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWEAA 358
Query: 555 EAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSA 614
+F EM + D Y L+D K G + A+E M + PNV + ++++
Sbjct: 359 RNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDG 418
Query: 615 FLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTE-ARSPYDMGFCHELMAVSGHPA 673
F + G+ +A +L M LG+ +Y LLS T+ RS + E+ +V G
Sbjct: 419 FAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASV-GIKK 477
Query: 674 HMFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRESKRGLVDAVVDFLHKSGLKEEAGSVW 733
+ + G Q D V M E ++D K GL +EA ++
Sbjct: 478 DVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIF 537
Query: 734 EVAAQKNVYPDAV 746
+ D V
Sbjct: 538 REFKSAGLRADVV 550
Score = 100 bits (248), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 69/274 (25%), Positives = 122/274 (44%), Gaps = 41/274 (14%)
Query: 350 LRRQA--GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGR 407
LR A G K D TY ++G G+ ++ + K+ +M R+ PN++TY+ LI Y +
Sbjct: 467 LREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSK 526
Query: 408 ANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFT 467
EA+++F++ + G D V Y LID K G + A+ + +M G+SP+ T
Sbjct: 527 GGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVT 586
Query: 468 YSVIINCLGKAGHLQAAHQLFCEMVNQGCIP---------NLVTYNIMIAL--------- 509
Y+ II+ G++ + + + N G +P N +I L
Sbjct: 587 YNSIIDAFGRSATMDRS----ADYSNGGSLPFSSSALSALTETEGNRVIQLFGQLTTESN 642
Query: 510 -------QAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMR 562
+ + L+++R M +P+ VT+S ++ C ++A + E+R
Sbjct: 643 NRTTKDCEEGMQELSCILEVFRKMHQLEIKPNVVTFSAILNACSRCNSFEDASMLLEELR 702
Query: 563 RKNWVPDEPVYGLLVD-LWGKAGNVRKAWEWYEA 595
+ D VYG++ L G+ NV W +A
Sbjct: 703 ----LFDNKVYGVVHGLLMGQRENV-----WLQA 727
Score = 42.4 bits (98), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 52/222 (23%), Positives = 86/222 (38%), Gaps = 17/222 (7%)
Query: 534 DKVTYSIVMEVLGHCGYLDEA----EAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKA 589
D TY ++ LG+ D+A E RRKN + ++ G+ G V A
Sbjct: 197 DDCTY--IIRELGNRNECDKAVGFYEFAVKRERRKN--EQGKLASAMISTLGRYGKVTIA 252
Query: 590 WEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSC 649
+E G V ++L+SA+ R G +A + M GL+P+L TY ++
Sbjct: 253 KRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDA 312
Query: 650 CTEARSPYDM--GFCHELMAVSGHPAHMF---LLSMPSPGPDGQNVRDHVGSFLEMMHSE 704
C + + F E+ P + LL++ S G + R+ +
Sbjct: 313 CGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQ 372
Query: 705 DRESKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAV 746
D S L+DA+ K G + A + K + P+ V
Sbjct: 373 DVFSYNTLLDAIC----KGGQMDLAFEILAQMPVKRIMPNVV 410
>sp|Q9LYZ9|PP362_ARATH Pentatricopeptide repeat-containing protein At5g02860
OS=Arabidopsis thaliana GN=At5g02860 PE=2 SV=1
Length = 819
Score = 183 bits (464), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 96/314 (30%), Positives = 162/314 (51%), Gaps = 3/314 (0%)
Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
+ G D +TY T++ R ++ ++M G + VTYN L+ YG+++
Sbjct: 271 KSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRP 330
Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
EA+ V +M + G P VTY +LI +A+ G LD AM++ +M G PD FTY+ +
Sbjct: 331 KEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTL 390
Query: 472 INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF 531
++ +AG +++A +F EM N GC PN+ T+N I + + +K++ ++ G
Sbjct: 391 LSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGL 450
Query: 532 EPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWE 591
PD VT++ ++ V G G E VF EM+R +VP+ + L+ + + G+ +A
Sbjct: 451 SPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMT 510
Query: 592 WYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCT 651
Y ML AG+ P++ T N++L+A R G + +L M + KP+ TY LL
Sbjct: 511 VYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYA 570
Query: 652 EARSPYDMGFCHEL 665
+ ++G H L
Sbjct: 571 NGK---EIGLMHSL 581
Score = 157 bits (398), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 87/310 (28%), Positives = 159/310 (51%), Gaps = 3/310 (0%)
Query: 342 VALGFFNWLRRQAGFKH--DEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYN 399
+AL F+W +Q ++ D ++ +LG+ + + + + + DG +V +Y
Sbjct: 153 LALRAFDWFMKQKDYQSMLDNSVVAIIISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYT 212
Query: 400 RLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGF-LDVAMDMYKKMQA 458
LI ++ + EA++VFK+M+ GC+P +TY ++++ K G + + +KM++
Sbjct: 213 SLISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPWNKITSLVEKMKS 272
Query: 459 AGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQS 518
G++PD +TY+ +I C + Q A Q+F EM G + VTYN ++ + K+ +
Sbjct: 273 DGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKE 332
Query: 519 ALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVD 578
A+K+ +M GF P VTY+ ++ G LDEA + +M K PD Y L+
Sbjct: 333 AMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLS 392
Query: 579 LWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKP 638
+ +AG V A +E M AG +PN+ T N+ + + G+ ++ + + GL P
Sbjct: 393 GFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSP 452
Query: 639 SLQTYTLLLS 648
+ T+ LL+
Sbjct: 453 DIVTWNTLLA 462
Score = 153 bits (386), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 84/307 (27%), Positives = 159/307 (51%), Gaps = 2/307 (0%)
Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLI 402
A FN L+ + GF D ++YT+++ + ++ + +M DGC+P ++TYN ++
Sbjct: 192 AANMFNGLQ-EDGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVIL 250
Query: 403 HSYGRANY-LNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGL 461
+ +G+ N+ + ++M+ G PD TY TLI + A ++++M+AAG
Sbjct: 251 NVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGF 310
Query: 462 SPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALK 521
S D TY+ +++ GK+ + A ++ EMV G P++VTYN +I+ A+ A++
Sbjct: 311 SYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAME 370
Query: 522 LYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWG 581
L M G +PD TY+ ++ G ++ A ++F EMR P+ + + ++G
Sbjct: 371 LKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYG 430
Query: 582 KAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQ 641
G + + ++ + GL P++ T N+LL+ F + G S+ + + M G P +
Sbjct: 431 NRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERE 490
Query: 642 TYTLLLS 648
T+ L+S
Sbjct: 491 TFNTLIS 497
Score = 151 bits (382), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 87/313 (27%), Positives = 160/313 (51%), Gaps = 2/313 (0%)
Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLI 402
A+ F +R AG K + T+ + + G +F + K+ D++ G P++VT+N L+
Sbjct: 403 AMSIFEEMR-NAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLL 461
Query: 403 HSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLS 462
+G+ +E VFK+M+ G P+R T+ TLI +++ G + AM +Y++M AG++
Sbjct: 462 AVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVT 521
Query: 463 PDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKL 522
PD TY+ ++ L + G + + ++ EM + C PN +TY ++ A + L
Sbjct: 522 PDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSL 581
Query: 523 YRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGK 582
++ + EP V ++ V C L EAE F+E++ + + PD +V ++G+
Sbjct: 582 AEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGR 641
Query: 583 AGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQT 642
V KA + M + G P++ T NSL+ R + +L+ +L G+KP + +
Sbjct: 642 RQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIIS 701
Query: 643 Y-TLLLSCCTEAR 654
Y T++ + C R
Sbjct: 702 YNTVIYAYCRNTR 714
Score = 150 bits (380), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 107/405 (26%), Positives = 184/405 (45%), Gaps = 74/405 (18%)
Query: 316 EALGNTNYSMDAYQANQVL---KQLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGR 372
E + + + DAY N ++ K+ H A F ++ AGF +D+ TY ++ + G+
Sbjct: 268 EKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMK-AAGFSYDKVTYNALLDVYGK 326
Query: 373 ARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVT 432
+ + K+L++MV +G P++VTYN LI +Y R L+EA+++ QM G +PD T
Sbjct: 327 SHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFT 386
Query: 433 YCTLIDIHAKAGFLDVAMDMYKKMQAA--------------------------------- 459
Y TL+ +AG ++ AM ++++M+ A
Sbjct: 387 YTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEIN 446
Query: 460 --GLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQ 517
GLSPD T++ ++ G+ G +F EM G +P T+N +I+ ++ +++
Sbjct: 447 VCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFE 506
Query: 518 SALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVY---- 573
A+ +YR M +AG PD TY+ V+ L G +++E V AEM P+E Y
Sbjct: 507 QAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLL 566
Query: 574 ---------GL----------------------LVDLWGKAGNVRKAWEWYEAMLQAGLR 602
GL LV + K + +A + + + G
Sbjct: 567 HAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFS 626
Query: 603 PNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
P++ T NS++S + R ++ A +L M G PS+ TY L+
Sbjct: 627 PDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLM 671
Score = 116 bits (290), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 67/281 (23%), Positives = 136/281 (48%)
Query: 354 AGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNE 413
AG D TY T++ L R + K+L +M C+PN +TY L+H+Y +
Sbjct: 518 AGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGL 577
Query: 414 ALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIIN 473
+ +++ EP V TL+ + +K L A + +++ G SPD T + +++
Sbjct: 578 MHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVS 637
Query: 474 CLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEP 533
G+ + A+ + M +G P++ TYN ++ + +++ ++ + ++ R++ G +P
Sbjct: 638 IYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILREILAKGIKP 697
Query: 534 DKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWY 593
D ++Y+ V+ + +A +F+EMR VPD Y + + +A
Sbjct: 698 DIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPDVITYNTFIGSYAADSMFEEAIGVV 757
Query: 594 EAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNL 634
M++ G RPN T NS++ + ++ + +A ++ + NL
Sbjct: 758 RYMIKHGCRPNQNTYNSIVDGYCKLNRKDEAKLFVEDLRNL 798
Score = 115 bits (289), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 68/294 (23%), Positives = 137/294 (46%), Gaps = 2/294 (0%)
Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
G D T+ T++ + G+ ++ + +M R G P T+N LI +Y R +A
Sbjct: 449 GLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQA 508
Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
+ V+++M G PD TY T++ A+ G + + + +M+ P+ TY +++
Sbjct: 509 MTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHA 568
Query: 475 LGKAGHLQAAHQLFCEMVNQGCI-PNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEP 533
+ H L E V G I P V ++ + +K A + + +++ GF P
Sbjct: 569 YANGKEIGLMHSL-AEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSP 627
Query: 534 DKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWY 593
D T + ++ + G + +A V M+ + + P Y L+ + ++ + K+ E
Sbjct: 628 DITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEIL 687
Query: 594 EAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
+L G++P++ + N+++ A+ R ++ DA + M N G+ P + TY +
Sbjct: 688 REILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPDVITYNTFI 741
Score = 97.8 bits (242), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 76/315 (24%), Positives = 135/315 (42%), Gaps = 44/315 (13%)
Query: 370 LGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPD 429
LG+ + ++ Q++R +PN S + L+E + FK + +
Sbjct: 86 LGKPWSYHGLSPQGQQVLRSLIEPN-------FDSGQLDSVLSELFEPFKD-KPESTSSE 137
Query: 430 RVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFC 489
+ + + H K A D + K + D ++II+ LGK G + +A +F
Sbjct: 138 LLAFLKGLGFHKKFDLALRAFDWFMKQKDYQSMLDNSVVAIIISMLGKEGRVSSAANMFN 197
Query: 490 EMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCG 549
+ G ++ +Y +I+ A + Y+ A+ +++ M+ G +P +TY++++ V G G
Sbjct: 198 GLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMG 257
Query: 550 ------------------------------------YLDEAEAVFAEMRRKNWVPDEPVY 573
EA VF EM+ + D+ Y
Sbjct: 258 TPWNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTY 317
Query: 574 GLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLN 633
L+D++GK+ ++A + M+ G P++ T NSL+SA+ R G L +A L M
Sbjct: 318 NALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAE 377
Query: 634 LGLKPSLQTYTLLLS 648
G KP + TYT LLS
Sbjct: 378 KGTKPDVFTYTTLLS 392
Score = 88.2 bits (217), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 86/177 (48%)
Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
++ GF D T +MV I GR + N +LD M G P++ TYN L++ + R+
Sbjct: 621 KERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSADF 680
Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
++ ++ +++ G +PD ++Y T+I + + + A ++ +M+ +G+ PD TY+
Sbjct: 681 GKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPDVITYNTF 740
Query: 472 INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQN 528
I + A + M+ GC PN TYN ++ K A D++N
Sbjct: 741 IGSYAADSMFEEAIGVVRYMIKHGCRPNQNTYNSIVDGYCKLNRKDEAKLFVEDLRN 797
Score = 55.8 bits (133), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/238 (23%), Positives = 101/238 (42%), Gaps = 15/238 (6%)
Query: 505 IMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRK 564
I+I++ K SA ++ +Q GF D +Y+ ++ + G EA VF +M
Sbjct: 178 IIISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEED 237
Query: 565 NWVPDEPVYGLLVDLWGKAGNV-RKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSD 623
P Y ++++++GK G K E M G+ P+ T N+L++ R +
Sbjct: 238 GCKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQE 297
Query: 624 AYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYD-MGFCHELMAVSGHPAHMFLLSMPS 682
A + + M G TY LL ++ P + M +E++ P+ + S+ S
Sbjct: 298 AAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLIS 357
Query: 683 PGPDGQNVRDHVGSFLEMMHSEDRESKRGLVDAVVDF------LHKSGLKEEAGSVWE 734
RD G E M +++ +++G V + ++G E A S++E
Sbjct: 358 -----AYARD--GMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFE 408
Score = 54.3 bits (129), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 38/160 (23%), Positives = 71/160 (44%), Gaps = 14/160 (8%)
Query: 512 KARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEP 571
K ++YQS L D +I++ +LG G + A +F ++ + D
Sbjct: 163 KQKDYQSML-------------DNSVVAIIISMLGKEGRVSSAANMFNGLQEDGFSLDVY 209
Query: 572 VYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQ-LSDAYHLLQG 630
Y L+ + +G R+A ++ M + G +P + T N +L+ F ++G + L++
Sbjct: 210 SYTSLISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPWNKITSLVEK 269
Query: 631 MLNLGLKPSLQTYTLLLSCCTEARSPYDMGFCHELMAVSG 670
M + G+ P TY L++CC + E M +G
Sbjct: 270 MKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAG 309
Score = 50.8 bits (120), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 55/100 (55%), Gaps = 2/100 (2%)
Query: 561 MRRKNW--VPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRV 618
M++K++ + D V +++ + GK G V A + + + G +V + SL+SAF
Sbjct: 162 MKQKDYQSMLDNSVVAIIISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSLISAFANS 221
Query: 619 GQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYD 658
G+ +A ++ + M G KP+L TY ++L+ + +P++
Sbjct: 222 GRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPWN 261
>sp|Q9LS25|PP420_ARATH Pentatricopeptide repeat-containing protein At5g46580,
chloroplastic OS=Arabidopsis thaliana GN=At5g46580 PE=2
SV=1
Length = 711
Score = 177 bits (450), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 135/558 (24%), Positives = 245/558 (43%), Gaps = 62/558 (11%)
Query: 333 VLKQLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQ 392
VL L++ FFNW++ ++ F + Y + L RQF I ++ +MV+DG +
Sbjct: 159 VLNSLREWQKTHTFFNWVKSKSLFPMETIFYNVTMKSLRFGRQFQLIEEMALEMVKDGVE 218
Query: 393 PNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDM 452
+ +TY+ +I R N N+A++ F++M G PD VTY ++D+++K+G ++ + +
Sbjct: 219 LDNITYSTIITCAKRCNLYNKAIEWFERMYKTGLMPDEVTYSAILDVYSKSGKVEEVLSL 278
Query: 453 YKKMQAAGLSPDTFTYSVI-----------------------------------INCLGK 477
Y++ A G PD +SV+ + +G+
Sbjct: 279 YERAVATGWKPDAIAFSVLGKMFGEAGDYDGIRYVLQEMKSMDVKPNVVVYNTLLEAMGR 338
Query: 478 AGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVT 537
AG A LF EM+ G PN T ++ + KAR + AL+L+ +M+ + D +
Sbjct: 339 AGKPGLARSLFNEMLEAGLTPNEKTLTALVKIYGKARWARDALQLWEEMKAKKWPMDFIL 398
Query: 538 YSIVMEVLGHCGYLDEAEAVFAEMRRK-NWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAM 596
Y+ ++ + G +EAE +F +M+ PD Y +++++G G KA E +E M
Sbjct: 399 YNTLLNMCADIGLEEEAERLFNDMKESVQCRPDNFSYTAMLNIYGSGGKAEKAMELFEEM 458
Query: 597 LQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSP 656
L+AG++ NV C L+ + ++ D ++ + G+KP + LLS S
Sbjct: 459 LKAGVQVNVMGCTCLVQCLGKAKRIDDVVYVFDLSIKRGVKPDDRLCGCLLSVMALCESS 518
Query: 657 YDMGFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRESKRGLVDAV 716
D + + F+ + + + V++ F ++++ E++R + +
Sbjct: 519 EDAEKVMACLERANKKLVTFVNLIVDEKTEYETVKEE---FKLVINATQVEARRPFCNCL 575
Query: 717 VDFLHKSGLKEEAGSVWEVAAQKNVYPDAVKEKGMSYWLINLHVMSDGTAVIALS---RT 773
+D + E A + + +YP + K + W +++ +S G A AL RT
Sbjct: 576 IDICRGNNRHERAHELLYLGTLFGLYP-GLHNKTIKEWSLDVRSLSVGAAETALEEWMRT 634
Query: 774 LAWFRK------QMLISGVGPSRIDIVTGWGRRSRVTGTSLVRQAVQELLHMFSFPFFTE 827
LA K ++ ++ G TG R S+ S L S P F +
Sbjct: 635 LANIIKRQEELPELFLAQTG-------TGTHRFSQGLANSFALH-----LQQLSAP-FRQ 681
Query: 828 NGNSGCFVGCGEPLNKWL 845
+ G FV E L WL
Sbjct: 682 SDRPGIFVATKEDLVSWL 699
Score = 45.1 bits (105), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/125 (25%), Positives = 55/125 (44%), Gaps = 4/125 (3%)
Query: 316 EALGNTNYSMDAYQANQVLKQLQD---HTVALGFFNWLRRQAGFKHDEHTYTTMVGILGR 372
E + + MD N +L D A FN ++ + D +YT M+ I G
Sbjct: 385 EEMKAKKWPMDFILYNTLLNMCADIGLEEEAERLFNDMKESVQCRPDNFSYTAMLNIYGS 444
Query: 373 ARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEP-DRV 431
+ +L ++M++ G Q NV+ L+ G+A +++ + VF G +P DR+
Sbjct: 445 GGKAEKAMELFEEMLKAGVQVNVMGCTCLVQCLGKAKRIDDVVYVFDLSIKRGVKPDDRL 504
Query: 432 TYCTL 436
C L
Sbjct: 505 CGCLL 509
>sp|Q9SZ52|PP344_ARATH Pentatricopeptide repeat-containing protein At4g31850,
chloroplastic OS=Arabidopsis thaliana GN=PGR3 PE=1 SV=1
Length = 1112
Score = 177 bits (450), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 120/443 (27%), Positives = 210/443 (47%), Gaps = 8/443 (1%)
Query: 309 KWGPLAEEALGNTNYSMDAYQANQVLKQLQDHTVALGFFNWLRRQA--GFKHDEHTYTTM 366
K P A + + ++AY N ++ L RR GF+ TY+++
Sbjct: 170 KQAPYALRKMREFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSL 229
Query: 367 VGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGC 426
+ LG+ R ++ LL +M G +PNV T+ I GRA +NEA ++ K+M GC
Sbjct: 230 MVGLGKRRDIDSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGC 289
Query: 427 EPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQ 486
PD VTY LID A LD A ++++KM+ PD TY +++ L + Q
Sbjct: 290 GPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQ 349
Query: 487 LFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLG 546
+ EM G +P++VT+ I++ KA N+ A M++ G P+ TY+ ++ L
Sbjct: 350 FWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLL 409
Query: 547 HCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVP 606
LD+A +F M P Y + +D +GK+G+ A E +E M G+ PN+
Sbjct: 410 RVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIV 469
Query: 607 TCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYD-MGFCHEL 665
CN+ L + + G+ +A + G+ ++GL P TY +++ C ++ + + E+
Sbjct: 470 ACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEM 529
Query: 666 MAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRESKRGLV--DAVVDFLHKS 723
M P + + S+ + V + F+ M ++ + K +V + ++ L K+
Sbjct: 530 MENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRM---KEMKLKPTVVTYNTLLAGLGKN 586
Query: 724 GLKEEAGSVWEVAAQKNVYPDAV 746
G +EA ++E QK P+ +
Sbjct: 587 GKIQEAIELFEGMVQKGCPPNTI 609
Score = 164 bits (414), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 95/308 (30%), Positives = 158/308 (51%), Gaps = 1/308 (0%)
Query: 359 DEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVF 418
D T+T +V L +A FG LD M G PN+ TYN LI R + L++AL++F
Sbjct: 362 DVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELF 421
Query: 419 KQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKA 478
M+ +G +P TY ID + K+G A++ ++KM+ G++P+ + + L KA
Sbjct: 422 GNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKA 481
Query: 479 GHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTY 538
G + A Q+F + + G +P+ VTYN+M+ +K A+KL +M G EPD +
Sbjct: 482 GRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVV 541
Query: 539 SIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQ 598
+ ++ L +DEA +F M+ P Y L+ GK G +++A E +E M+Q
Sbjct: 542 NSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQ 601
Query: 599 AGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTY-TLLLSCCTEARSPY 657
G PN T N+L + +++ A +L M+++G P + TY T++ +
Sbjct: 602 KGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKE 661
Query: 658 DMGFCHEL 665
M F H++
Sbjct: 662 AMCFFHQM 669
Score = 159 bits (402), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 91/293 (31%), Positives = 153/293 (52%)
Query: 357 KHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALD 416
K D TY T++ R ++ + +M +DG P+VVT+ L+ + +A EA D
Sbjct: 325 KPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFD 384
Query: 417 VFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLG 476
M+ G P+ TY TLI + LD A++++ M++ G+ P +TY V I+ G
Sbjct: 385 TLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYG 444
Query: 477 KAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKV 536
K+G +A + F +M +G PN+V N + AKA + A +++ +++ G PD V
Sbjct: 445 KSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSV 504
Query: 537 TYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAM 596
TY+++M+ G +DEA + +EM PD V L++ KA V +AW+ + M
Sbjct: 505 TYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRM 564
Query: 597 LQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSC 649
+ L+P V T N+LL+ + G++ +A L +GM+ G P+ T+ L C
Sbjct: 565 KEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDC 617
Score = 157 bits (398), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 102/338 (30%), Positives = 156/338 (46%), Gaps = 37/338 (10%)
Query: 346 FFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSY 405
F + G + TY ++G L A + Q+ GC P+V TYN L+ +Y
Sbjct: 771 LFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAY 830
Query: 406 GRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKK-MQAAGLSPD 464
G++ ++E +++K+M CE + +T+ +I KAG +D A+D+Y M SP
Sbjct: 831 GKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPT 890
Query: 465 TFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYR 524
TY +I+ L K+G L A QLF M++ GC PN YNI+I KA +A L++
Sbjct: 891 ACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFK 950
Query: 525 DMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGK-- 582
M G PD TYS++++ L G +DE F E++ PD Y L+++ GK
Sbjct: 951 RMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSH 1010
Query: 583 ----------------------------------AGNVRKAWEWYEAMLQAGLRPNVPTC 608
AG V +A + Y + +AGL PNV T
Sbjct: 1011 RLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTF 1070
Query: 609 NSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLL 646
N+L+ + G+ AY + Q M+ G P+ TY L
Sbjct: 1071 NALIRGYSLSGKPEHAYAVYQTMVTGGFSPNTGTYEQL 1108
Score = 125 bits (315), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 92/354 (25%), Positives = 153/354 (43%), Gaps = 35/354 (9%)
Query: 329 QANQVLKQLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVR 388
+ + LK D + +F + H T M+ L + + + D M +
Sbjct: 87 EVTRGLKSFPDTDSSFSYFKSVAGNLNLVHTTETCNYMLEALRVDGKLEEMAYVFDLMQK 146
Query: 389 DGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDV 448
+ + TY + S L +A ++M+ G + +Y LI + K+ F
Sbjct: 147 RIIKRDTNTYLTIFKSLSVKGGLKQAPYALRKMREFGFVLNAYSYNGLIHLLLKSRFCTE 206
Query: 449 AMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIA 508
AM++Y++M G P TYS ++ LGK + + L EM G PN+ T+ I I
Sbjct: 207 AMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVYTFTICIR 266
Query: 509 LQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVF---------- 558
+ +A A ++ + M + G PD VTY+++++ L LD A+ VF
Sbjct: 267 VLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKP 326
Query: 559 -------------------------AEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWY 593
+EM + VPD + +LVD KAGN +A++
Sbjct: 327 DRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTL 386
Query: 594 EAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
+ M G+ PN+ T N+L+ LRV +L DA L M +LG+KP+ TY + +
Sbjct: 387 DVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFI 440
Score = 124 bits (311), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 74/232 (31%), Positives = 120/232 (51%), Gaps = 1/232 (0%)
Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLI 402
AL + L F TY ++ L ++ + +L + M+ GC+PN YN LI
Sbjct: 874 ALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILI 933
Query: 403 HSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLS 462
+ +G+A + A +FK+M G PD TY L+D G +D + +K+++ +GL+
Sbjct: 934 NGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLN 993
Query: 463 PDTFTYSVIINCLGKAGHLQAAHQLFCEM-VNQGCIPNLVTYNIMIALQAKARNYQSALK 521
PD Y++IIN LGK+ L+ A LF EM ++G P+L TYN +I A + A K
Sbjct: 994 PDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGK 1053
Query: 522 LYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVY 573
+Y ++Q AG EP+ T++ ++ G + A AV+ M + P+ Y
Sbjct: 1054 IYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPNTGTY 1105
Score = 114 bits (284), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 109/469 (23%), Positives = 193/469 (41%), Gaps = 78/469 (16%)
Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
Q G + T+ T+ L + + K+L +M+ GC P+V TYN +I + +
Sbjct: 601 QKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVK 660
Query: 413 EALDVFKQMQVVGCEPDRVTYCTLI----------------------------------- 437
EA+ F QM+ + PD VT CTL+
Sbjct: 661 EAMCFFHQMKKL-VYPDFVTLCTLLPGVVKASLIEDAYKIITNFLYNCADQPANLFWEDL 719
Query: 438 --DIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSV-IINCLGKAGHLQAAHQLFCEMVNQ 494
I A+AG +D A+ +++ A G+ D + V II K ++ A LF +
Sbjct: 720 IGSILAEAG-IDNAVSFSERLVANGICRDGDSILVPIIRYSCKHNNVSGARTLFEKFTKD 778
Query: 495 -GCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDE 553
G P L TYN++I +A + A ++ +++ G PD TY+ +++ G G +DE
Sbjct: 779 LGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDE 838
Query: 554 AEAVFAEMRR------------------------------------KNWVPDEPVYGLLV 577
++ EM +++ P YG L+
Sbjct: 839 LFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLI 898
Query: 578 DLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLK 637
D K+G + +A + +E ML G RPN N L++ F + G+ A L + M+ G++
Sbjct: 899 DGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVR 958
Query: 638 PSLQTYTLLLSC-CTEARSPYDMGFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGS 696
P L+TY++L+ C C R + + EL +P + + + + + +
Sbjct: 959 PDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVL 1018
Query: 697 FLEMMHSEDRESKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDA 745
F EM S ++++ L +G+ EEAG ++ + + P+
Sbjct: 1019 FNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNV 1067
Score = 94.4 bits (233), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 71/263 (26%), Positives = 121/263 (46%), Gaps = 10/263 (3%)
Query: 401 LIHSYGRANYLNEALDV----------FKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAM 450
L+H+ NY+ EAL V F MQ + D TY T+ + G L A
Sbjct: 114 LVHTTETCNYMLEALRVDGKLEEMAYVFDLMQKRIIKRDTNTYLTIFKSLSVKGGLKQAP 173
Query: 451 DMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQ 510
+KM+ G + ++Y+ +I+ L K+ A +++ M+ +G P+L TY+ ++
Sbjct: 174 YALRKMREFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGL 233
Query: 511 AKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDE 570
K R+ S + L ++M+ G +P+ T++I + VLG G ++EA + M + PD
Sbjct: 234 GKRRDIDSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDV 293
Query: 571 PVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQG 630
Y +L+D A + A E +E M +P+ T +LL F L
Sbjct: 294 VTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSE 353
Query: 631 MLNLGLKPSLQTYTLLLSCCTEA 653
M G P + T+T+L+ +A
Sbjct: 354 MEKDGHVPDVVTFTILVDALCKA 376
Score = 60.5 bits (145), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 68/132 (51%), Gaps = 2/132 (1%)
Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQM-VRDGCQPNVVTYNRL 401
L +F L+ ++G D Y ++ LG++ + L ++M G P++ TYN L
Sbjct: 980 GLHYFKELK-ESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSL 1038
Query: 402 IHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGL 461
I + G A + EA ++ ++Q G EP+ T+ LI ++ +G + A +Y+ M G
Sbjct: 1039 ILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGF 1098
Query: 462 SPDTFTYSVIIN 473
SP+T TY + N
Sbjct: 1099 SPNTGTYEQLPN 1110
>sp|O64624|PP163_ARATH Pentatricopeptide repeat-containing protein At2g18940
OS=Arabidopsis thaliana GN=At2g18940 PE=2 SV=1
Length = 822
Score = 177 bits (448), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 105/359 (29%), Positives = 175/359 (48%), Gaps = 8/359 (2%)
Query: 291 FASTGNVVESVSRILRQWKWGPLAEEALGNTNYSMDAYQANQVLKQLQDHTVALGFFNWL 350
++ TG +++ R + GP L N +D + K + LG + +
Sbjct: 220 YSRTGKYEKAIDLFERMKEMGP--SPTLVTYNVILDVFG-----KMGRSWRKILGVLDEM 272
Query: 351 RRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANY 410
R + G K DE T +T++ R + ++ G +P VTYN L+ +G+A
Sbjct: 273 RSK-GLKFDEFTCSTVLSACAREGLLREAKEFFAELKSCGYEPGTVTYNALLQVFGKAGV 331
Query: 411 LNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSV 470
EAL V K+M+ C D VTY L+ + +AGF A + + M G+ P+ TY+
Sbjct: 332 YTEALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAITYTT 391
Query: 471 IINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAG 530
+I+ GKAG A +LF M GC+PN TYN +++L K +K+ DM++ G
Sbjct: 392 VIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSRSNEMIKMLCDMKSNG 451
Query: 531 FEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAW 590
P++ T++ ++ + G+ G VF EM+ + PD + L+ +G+ G+ A
Sbjct: 452 CSPNRATWNTMLALCGNKGMDKFVNRVFREMKSCGFEPDRDTFNTLISAYGRCGSEVDAS 511
Query: 591 EWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSC 649
+ Y M +AG V T N+LL+A R G +++ M + G KP+ +Y+L+L C
Sbjct: 512 KMYGEMTRAGFNACVTTYNALLNALARKGDWRSGENVISDMKSKGFKPTETSYSLMLQC 570
Score = 153 bits (387), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 91/312 (29%), Positives = 156/312 (50%), Gaps = 4/312 (1%)
Query: 343 ALGFFNWL---RRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYN 399
A+ F WL K D V ILGR Q+ KLLD++ +V Y
Sbjct: 155 AVFLFEWLVLSSNSGALKLDHQVIEIFVRILGRESQYSVAAKLLDKIPLQEYLLDVRAYT 214
Query: 400 RLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAG-FLDVAMDMYKKMQA 458
++H+Y R +A+D+F++M+ +G P VTY ++D+ K G + + +M++
Sbjct: 215 TILHAYSRTGKYEKAIDLFERMKEMGPSPTLVTYNVILDVFGKMGRSWRKILGVLDEMRS 274
Query: 459 AGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQS 518
GL D FT S +++ + G L+ A + F E+ + G P VTYN ++ + KA Y
Sbjct: 275 KGLKFDEFTCSTVLSACAREGLLREAKEFFAELKSCGYEPGTVTYNALLQVFGKAGVYTE 334
Query: 519 ALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVD 578
AL + ++M+ D VTY+ ++ G+ EA V M +K +P+ Y ++D
Sbjct: 335 ALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAITYTTVID 394
Query: 579 LWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKP 638
+GKAG +A + + +M +AG PN T N++LS + + ++ +L M + G P
Sbjct: 395 AYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSRSNEMIKMLCDMKSNGCSP 454
Query: 639 SLQTYTLLLSCC 650
+ T+ +L+ C
Sbjct: 455 NRATWNTMLALC 466
Score = 134 bits (337), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 85/344 (24%), Positives = 157/344 (45%), Gaps = 42/344 (12%)
Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLI 402
AL F + ++AG + TY ++ +LG+ + + K+L M +GC PN T+N ++
Sbjct: 405 ALKLF-YSMKEAGCVPNTCTYNAVLSLLGKKSRSNEMIKMLCDMKSNGCSPNRATWNTML 463
Query: 403 HSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLS 462
G VF++M+ G EPDR T+ TLI + + G A MY +M AG +
Sbjct: 464 ALCGNKGMDKFVNRVFREMKSCGFEPDRDTFNTLISAYGRCGSEVDASKMYGEMTRAGFN 523
Query: 463 PDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNY------ 516
TY+ ++N L + G ++ + +M ++G P +Y++M+ AK NY
Sbjct: 524 ACVTTYNALLNALARKGDWRSGENVISDMKSKGFKPTETSYSLMLQCYAKGGNYLGIERI 583
Query: 517 --------------------------------QSALKLYRDMQNAGFEPDKVTYSIVMEV 544
+ A L++ G++PD V ++ ++ +
Sbjct: 584 ENRIKEGQIFPSWMLLRTLLLANFKCRALAGSERAFTLFK---KHGYKPDMVIFNSMLSI 640
Query: 545 LGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPN 604
D+AE + +R PD Y L+D++ + G KA E + + ++ L+P+
Sbjct: 641 FTRNNMYDQAEGILESIREDGLSPDLVTYNSLMDMYVRRGECWKAEEILKTLEKSQLKPD 700
Query: 605 VPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
+ + N+++ F R G + +A +L M G++P + TY +S
Sbjct: 701 LVSYNTVIKGFCRRGLMQEAVRMLSEMTERGIRPCIFTYNTFVS 744
Score = 85.5 bits (210), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/311 (20%), Positives = 124/311 (39%), Gaps = 41/311 (13%)
Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
+ GF+ D T+ T++ GR +K+ +M R G V TYN L+++ R
Sbjct: 483 KSCGFEPDRDTFNTLISAYGRCGSEVDASKMYGEMTRAGFNACVTTYNALLNALARKGDW 542
Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAG-FLDV---------------------- 448
+V M+ G +P +Y ++ +AK G +L +
Sbjct: 543 RSGENVISDMKSKGFKPTETSYSLMLQCYAKGGNYLGIERIENRIKEGQIFPSWMLLRTL 602
Query: 449 ---------------AMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVN 493
A ++KK G PD ++ +++ + A + +
Sbjct: 603 LLANFKCRALAGSERAFTLFKK---HGYKPDMVIFNSMLSIFTRNNMYDQAEGILESIRE 659
Query: 494 QGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDE 553
G P+LVTYN ++ + + A ++ + ++ + +PD V+Y+ V++ G + E
Sbjct: 660 DGLSPDLVTYNSLMDMYVRRGECWKAEEILKTLEKSQLKPDLVSYNTVIKGFCRRGLMQE 719
Query: 554 AEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLS 613
A + +EM + P Y V + G + + E M + RPN T ++
Sbjct: 720 AVRMLSEMTERGIRPCIFTYNTFVSGYTAMGMFAEIEDVIECMAKNDCRPNELTFKMVVD 779
Query: 614 AFLRVGQLSDA 624
+ R G+ S+A
Sbjct: 780 GYCRAGKYSEA 790
Score = 83.6 bits (205), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 86/184 (46%), Gaps = 2/184 (1%)
Query: 350 LRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRAN 409
L ++ G+K D + +M+ I R + +L+ + DG P++VTYN L+ Y R
Sbjct: 621 LFKKHGYKPDMVIFNSMLSIFTRNNMYDQAEGILESIREDGLSPDLVTYNSLMDMYVRRG 680
Query: 410 YLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYS 469
+A ++ K ++ +PD V+Y T+I + G + A+ M +M G+ P FTY+
Sbjct: 681 ECWKAEEILKTLEKSQLKPDLVSYNTVIKGFCRRGLMQEAVRMLSEMTERGIRPCIFTYN 740
Query: 470 VIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNA 529
++ G + M C PN +T+ +++ +A Y A+ ++
Sbjct: 741 TFVSGYTAMGMFAEIEDVIECMAKNDCRPNELTFKMVVDGYCRAGKYSEAMDFVSKIKT- 799
Query: 530 GFEP 533
F+P
Sbjct: 800 -FDP 802
Score = 81.6 bits (200), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 52/241 (21%), Positives = 109/241 (45%)
Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
+ GFK E +Y+ M+ + + I ++ +++ P+ + L+ + + L
Sbjct: 553 KSKGFKPTETSYSLMLQCYAKGGNYLGIERIENRIKEGQIFPSWMLLRTLLLANFKCRAL 612
Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
+ F + G +PD V + +++ I + D A + + ++ GLSPD TY+ +
Sbjct: 613 AGSERAFTLFKKHGYKPDMVIFNSMLSIFTRNNMYDQAEGILESIREDGLSPDLVTYNSL 672
Query: 472 INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF 531
++ + G A ++ + P+LV+YN +I + Q A+++ +M G
Sbjct: 673 MDMYVRRGECWKAEEILKTLEKSQLKPDLVSYNTVIKGFCRRGLMQEAVRMLSEMTERGI 732
Query: 532 EPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWE 591
P TY+ + G E E V M + + P+E + ++VD + +AG +A +
Sbjct: 733 RPCIFTYNTFVSGYTAMGMFAEIEDVIECMAKNDCRPNELTFKMVVDGYCRAGKYSEAMD 792
Query: 592 W 592
+
Sbjct: 793 F 793
Score = 52.8 bits (125), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/132 (23%), Positives = 58/132 (43%), Gaps = 14/132 (10%)
Query: 326 DAYQANQVLKQLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQ 385
+ ++A ++LK L+ ++ K D +Y T++ R ++L +
Sbjct: 681 ECWKAEEILKTLE--------------KSQLKPDLVSYNTVIKGFCRRGLMQEAVRMLSE 726
Query: 386 MVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGF 445
M G +P + TYN + Y E DV + M C P+ +T+ ++D + +AG
Sbjct: 727 MTERGIRPCIFTYNTFVSGYTAMGMFAEIEDVIECMAKNDCRPNELTFKMVVDGYCRAGK 786
Query: 446 LDVAMDMYKKMQ 457
AMD K++
Sbjct: 787 YSEAMDFVSKIK 798
>sp|Q9LQ16|PPR94_ARATH Pentatricopeptide repeat-containing protein At1g62910
OS=Arabidopsis thaliana GN=At1g62910 PE=2 SV=1
Length = 632
Score = 165 bits (418), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 96/297 (32%), Positives = 159/297 (53%), Gaps = 4/297 (1%)
Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
+ G+K D T+TT++ L + L+DQMV+ GCQP++VTY +++ + ++
Sbjct: 181 EMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDID 240
Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
AL + K+M+ E D V Y T+ID K +D A++++ +M G+ PD FTYS +I
Sbjct: 241 LALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLI 300
Query: 473 NCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFE 532
+CL G A +L +M+ + PN+VT++ +I K A KLY +M +
Sbjct: 301 SCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSID 360
Query: 533 PDKVTYSIVMEVLGHCGY--LDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAW 590
PD TYS ++ G C + LDEA+ +F M K+ P+ Y L+ + KA V +
Sbjct: 361 PDIFTYSSLIN--GFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGM 418
Query: 591 EWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
E + M Q GL N T +L+ F + +A + + M+++G+ P++ TY +LL
Sbjct: 419 ELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILL 475
Score = 151 bits (382), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 93/305 (30%), Positives = 157/305 (51%), Gaps = 1/305 (0%)
Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLI 402
AL F + + G + D TY++++ L ++ ++LL M+ PNVVT++ LI
Sbjct: 277 ALNLFTEMDNK-GIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALI 335
Query: 403 HSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLS 462
++ + L EA ++ +M +PD TY +LI+ LD A M++ M +
Sbjct: 336 DAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCF 395
Query: 463 PDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKL 522
P+ TYS +I KA ++ +LF EM +G + N VTY +I +AR+ +A +
Sbjct: 396 PNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMV 455
Query: 523 YRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGK 582
++ M + G P+ +TY+I+++ L G L +A VF ++R PD Y ++++ K
Sbjct: 456 FKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCK 515
Query: 583 AGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQT 642
AG V WE + + G+ PNV N+++S F R G +A LL+ M G P+ T
Sbjct: 516 AGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGT 575
Query: 643 YTLLL 647
Y L+
Sbjct: 576 YNTLI 580
Score = 150 bits (379), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 95/322 (29%), Positives = 166/322 (51%), Gaps = 3/322 (0%)
Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
+ G++ D T ++++ +++ L+DQMV G +P+ T+ LIH N +
Sbjct: 146 KLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKAS 205
Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
EA+ + QM GC+PD VTY T+++ K G +D+A+ + KKM+ + D Y+ II
Sbjct: 206 EAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTII 265
Query: 473 NCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFE 532
+ L K H+ A LF EM N+G P++ TY+ +I+ + A +L DM
Sbjct: 266 DGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKIN 325
Query: 533 PDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEW 592
P+ VT+S +++ G L EAE ++ EM +++ PD Y L++ + + +A
Sbjct: 326 PNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHM 385
Query: 593 YEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTE 652
+E M+ PNV T ++L+ F + ++ + L + M GL + TYT L+ +
Sbjct: 386 FELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQ 445
Query: 653 ARSPYD--MGFCHELMAVSGHP 672
AR + M F ++++V HP
Sbjct: 446 ARDCDNAQMVF-KQMVSVGVHP 466
Score = 143 bits (360), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 88/315 (27%), Positives = 159/315 (50%), Gaps = 7/315 (2%)
Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
G HD +TY+ + R Q +L +M++ G +P++VT + L++ Y + +++A
Sbjct: 113 GISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDA 172
Query: 415 LDVFKQMQVVGCEPDRVTYCTLID---IHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
+ + QM +G +PD T+ TLI +H KA A+ + +M G PD TY +
Sbjct: 173 VALVDQMVEMGYKPDTFTFTTLIHGLFLHNKAS---EAVALVDQMVQRGCQPDLVTYGTV 229
Query: 472 INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF 531
+N L K G + A L +M ++V YN +I K ++ AL L+ +M N G
Sbjct: 230 VNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGI 289
Query: 532 EPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWE 591
PD TYS ++ L + G +A + ++M + P+ + L+D + K G + +A +
Sbjct: 290 RPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEK 349
Query: 592 WYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTY-TLLLSCC 650
Y+ M++ + P++ T +SL++ F +L +A H+ + M++ P++ TY TL+ C
Sbjct: 350 LYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFC 409
Query: 651 TEARSPYDMGFCHEL 665
R M E+
Sbjct: 410 KAKRVEEGMELFREM 424
Score = 133 bits (335), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 100/365 (27%), Positives = 172/365 (47%), Gaps = 22/365 (6%)
Query: 363 YTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQ 422
+ ++ + + +F + L +QM G ++ TY+ I+ + R + L+ AL V +M
Sbjct: 86 FNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMM 145
Query: 423 VVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQ 482
+G EPD VT +L++ + + + A+ + +M G PDTFT++ +I+ L
Sbjct: 146 KLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKAS 205
Query: 483 AAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVM 542
A L +MV +GC P+LVTY ++ K + AL L + M+ E D V Y+ ++
Sbjct: 206 EAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTII 265
Query: 543 EVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLR 602
+ L ++D+A +F EM K PD Y L+ G A M++ +
Sbjct: 266 DGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKIN 325
Query: 603 PNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGFC 662
PNV T ++L+ AF++ G+L +A L M+ + P + TY+ L++ GFC
Sbjct: 326 PNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLIN-----------GFC 374
Query: 663 -HELMAVSGHPAHMFLLSMPSPG-PDGQNVRDHVGSFLEMMHSED-----RE-SKRGLVD 714
H+ + HMF L + P+ + F + E+ RE S+RGLV
Sbjct: 375 MHDRL---DEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVG 431
Query: 715 AVVDF 719
V +
Sbjct: 432 NTVTY 436
Score = 131 bits (329), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 79/293 (26%), Positives = 149/293 (50%)
Query: 362 TYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQM 421
T++ ++ + + KL D+M++ P++ TY+ LI+ + + L+EA +F+ M
Sbjct: 330 TFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELM 389
Query: 422 QVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHL 481
C P+ VTY TLI KA ++ M+++++M GL +T TY+ +I+ +A
Sbjct: 390 ISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDC 449
Query: 482 QAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIV 541
A +F +MV+ G PN++TYNI++ K A+ ++ +Q + EPD TY+I+
Sbjct: 450 DNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIM 509
Query: 542 MEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGL 601
+E + G +++ +F + K P+ Y ++ + + G+ +A + M + G
Sbjct: 510 IEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGP 569
Query: 602 RPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEAR 654
PN T N+L+ A LR G + L++ M + G T L+ + + R
Sbjct: 570 LPNSGTYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTNMLHDGR 622
Score = 111 bits (277), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 68/267 (25%), Positives = 131/267 (49%), Gaps = 1/267 (0%)
Query: 359 DEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVF 418
D TY++++ + + + M+ C PNVVTY+ LI + +A + E +++F
Sbjct: 362 DIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELF 421
Query: 419 KQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKA 478
++M G + VTY TLI +A D A ++K+M + G+ P+ TY+++++ L K
Sbjct: 422 REMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKN 481
Query: 479 GHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTY 538
G L A +F + P++ TYNIMI KA + +L+ ++ G P+ + Y
Sbjct: 482 GKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAY 541
Query: 539 SIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQ 598
+ ++ G +EA+++ +M+ +P+ Y L+ + G+ + E + M
Sbjct: 542 NTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDREASAELIKEMRS 601
Query: 599 AGLRPNVPTCNSLLSAFLRVGQLSDAY 625
G + T L++ L G+L ++
Sbjct: 602 CGFAGDASTI-GLVTNMLHDGRLDKSF 627
Score = 106 bits (265), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 64/245 (26%), Positives = 121/245 (49%), Gaps = 1/245 (0%)
Query: 411 LNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSV 470
+++A+D+F M P V + L+ AK ++ + + ++MQ G+S D +TYS+
Sbjct: 64 VDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSI 123
Query: 471 IINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAG 530
INC + L A + +M+ G P++VT + ++ ++ A+ L M G
Sbjct: 124 FINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMG 183
Query: 531 FEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAW 590
++PD T++ ++ L EA A+ +M ++ PD YG +V+ K G++ A
Sbjct: 184 YKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLAL 243
Query: 591 EWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSC- 649
+ M + + +V N+++ + + DA +L M N G++P + TY+ L+SC
Sbjct: 244 SLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCL 303
Query: 650 CTEAR 654
C R
Sbjct: 304 CNYGR 308
Score = 99.4 bits (246), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 106/202 (52%), Gaps = 1/202 (0%)
Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
Q G + TYTT++ +AR + QMV G PN++TYN L+ + L
Sbjct: 426 QRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLA 485
Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
+A+ VF+ +Q EPD TY +I+ KAG ++ +++ + G+SP+ Y+ +I
Sbjct: 486 KAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMI 545
Query: 473 NCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFE 532
+ + G + A L +M G +PN TYN +I + + + +++ +L ++M++ GF
Sbjct: 546 SGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDREASAELIKEMRSCGFA 605
Query: 533 PDKVTYSIVMEVLGHCGYLDEA 554
D T +V +L H G LD++
Sbjct: 606 GDASTIGLVTNML-HDGRLDKS 626
Score = 69.3 bits (168), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 79/174 (45%)
Query: 470 VIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNA 529
++ N L + A LF +MV P++V +N +++ AK ++ + L MQ
Sbjct: 53 ILRNRLSDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTL 112
Query: 530 GFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKA 589
G D TYSI + L A AV A+M + + PD L++ + + + A
Sbjct: 113 GISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDA 172
Query: 590 WEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTY 643
+ M++ G +P+ T +L+ + S+A L+ M+ G +P L TY
Sbjct: 173 VALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTY 226
>sp|Q9S7Q2|PP124_ARATH Pentatricopeptide repeat-containing protein At1g74850,
chloroplastic OS=Arabidopsis thaliana GN=PTAC2 PE=2 SV=1
Length = 862
Score = 164 bits (416), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 95/351 (27%), Positives = 168/351 (47%), Gaps = 36/351 (10%)
Query: 339 DHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTY 398
D +L F +++RQ K +EH YT M+ +LGR ++ D+M G +V +Y
Sbjct: 120 DWQRSLRLFKYMQRQIWCKPNEHIYTIMISLLGREGLLDKCLEVFDEMPSQGVSRSVFSY 179
Query: 399 NRLIHSYGRANYLNEALDV------------------------------------FKQMQ 422
LI++YGR +L++ F +M+
Sbjct: 180 TALINAYGRNGRYETSLELLDRMKNEKISPSILTYNTVINACARGGLDWEGLLGLFAEMR 239
Query: 423 VVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQ 482
G +PD VTY TL+ A G D A +++ M G+ PD TYS ++ GK L+
Sbjct: 240 HEGIQPDIVTYNTLLSACAIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLE 299
Query: 483 AAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVM 542
L EM + G +P++ +YN+++ AK+ + + A+ ++ MQ AG P+ TYS+++
Sbjct: 300 KVCDLLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLL 359
Query: 543 EVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLR 602
+ G G D+ +F EM+ N PD Y +L++++G+ G ++ + M++ +
Sbjct: 360 NLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIE 419
Query: 603 PNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEA 653
P++ T ++ A + G DA +LQ M + PS + YT ++ +A
Sbjct: 420 PDMETYEGIIFACGKGGLHEDARKILQYMTANDIVPSSKAYTGVIEAFGQA 470
Score = 152 bits (385), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 86/301 (28%), Positives = 158/301 (52%), Gaps = 3/301 (0%)
Query: 344 LGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDG-CQPNVVTYNRLI 402
LG F +R + G + D TY T++ R G +++ + + DG P++ TY+ L+
Sbjct: 232 LGLFAEMRHE-GIQPDIVTYNTLLSACA-IRGLGDEAEMVFRTMNDGGIVPDLTTYSHLV 289
Query: 403 HSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLS 462
++G+ L + D+ +M G PD +Y L++ +AK+G + AM ++ +MQAAG +
Sbjct: 290 ETFGKLRRLEKVCDLLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCT 349
Query: 463 PDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKL 522
P+ TYSV++N G++G QLF EM + P+ TYNI+I + + ++ + L
Sbjct: 350 PNANTYSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTL 409
Query: 523 YRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGK 582
+ DM EPD TY ++ G G ++A + M + VP Y +++ +G+
Sbjct: 410 FHDMVEENIEPDMETYEGIIFACGKGGLHEDARKILQYMTANDIVPSSKAYTGVIEAFGQ 469
Query: 583 AGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQT 642
A +A + M + G P++ T +SLL +F R G + ++ +L +++ G+ + T
Sbjct: 470 AALYEEALVAFNTMHEVGSNPSIETFHSLLYSFARGGLVKESEAILSRLVDSGIPRNRDT 529
Query: 643 Y 643
+
Sbjct: 530 F 530
Score = 150 bits (380), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 127/536 (23%), Positives = 226/536 (42%), Gaps = 46/536 (8%)
Query: 354 AGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNE 413
G D TY+ +V G+ R+ + LL +M G P++ +YN L+ +Y ++ + E
Sbjct: 276 GGIVPDLTTYSHLVETFGKLRRLEKVCDLLGEMASGGSLPDITSYNVLLEAYAKSGSIKE 335
Query: 414 ALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIIN 473
A+ VF QMQ GC P+ TY L+++ ++G D ++ +M+++ PD TY+++I
Sbjct: 336 AMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIE 395
Query: 474 CLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEP 533
G+ G+ + LF +MV + P++ TY +I K ++ A K+ + M P
Sbjct: 396 VFGEGGYFKEVVTLFHDMVEENIEPDMETYEGIIFACGKGGLHEDARKILQYMTANDIVP 455
Query: 534 DKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWY 593
Y+ V+E G +EA F M P + L+ + + G V+++
Sbjct: 456 SSKAYTGVIEAFGQAALYEEALVAFNTMHEVGSNPSIETFHSLLYSFARGGLVKESEAIL 515
Query: 594 EAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEA 653
++ +G+ N T N+ + A+ + G+ +A M P +T +LS + A
Sbjct: 516 SRLVDSGIPRNRDTFNAQIEAYKQGGKFEEAVKTYVDMEKSRCDPDERTLEAVLSVYSFA 575
Query: 654 R-----------------SPYDMGFCHELMAVSGHPA--------------------HMF 676
R P M +C ++AV G H
Sbjct: 576 RLVDECREQFEEMKASDILPSIMCYCM-MLAVYGKTERWDDVNELLEEMLSNRVSNIHQV 634
Query: 677 LLSMPSPGPDGQNVRDHVGSFLEMMHSEDRESKRGLVDAVVDFLHKSGLKEEAGSVWEVA 736
+ M D + V L+ ++SE +A++D L G KE A V A
Sbjct: 635 IGQMIKGDYDDDSNWQIVEYVLDKLNSEGCGLGIRFYNALLDALWWLGQKERAARVLNEA 694
Query: 737 AQKNVYPDAVKEKGMSYWLINLHVMSDGTAVIALSRTLAWFR--KQMLISGVGPSRIDIV 794
++ ++P+ ++ + W +++H MS+G ALS W ML+ G P +V
Sbjct: 695 TKRGLFPELFRKNKL-VWSVDVHRMSEGGMYTALS---VWLNDINDMLLKGDLPQLAVVV 750
Query: 795 TGWGR--RSRVTGTSLVRQAVQELLHMFSFPFFTENGNSGCFVGCGEPLNKWLLQS 848
+ G+ +S S + +A L F+ G +G + C K LL +
Sbjct: 751 SVRGQLEKSSAARESPIAKAAFSFLQDHVSSSFSFTGWNGGRIMCQRSQLKQLLST 806
Score = 141 bits (355), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 82/287 (28%), Positives = 142/287 (49%), Gaps = 1/287 (0%)
Query: 362 TYTTMVGILGRA-RQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQ 420
TY T++ R + + L +M +G QP++VTYN L+ + +EA VF+
Sbjct: 213 TYNTVINACARGGLDWEGLLGLFAEMRHEGIQPDIVTYNTLLSACAIRGLGDEAEMVFRT 272
Query: 421 MQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGH 480
M G PD TY L++ K L+ D+ +M + G PD +Y+V++ K+G
Sbjct: 273 MNDGGIVPDLTTYSHLVETFGKLRRLEKVCDLLGEMASGGSLPDITSYNVLLEAYAKSGS 332
Query: 481 LQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSI 540
++ A +F +M GC PN TY++++ L ++ Y +L+ +M+++ +PD TY+I
Sbjct: 333 IKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNI 392
Query: 541 VMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAG 600
++EV G GY E +F +M +N PD Y ++ GK G A + + M
Sbjct: 393 LIEVFGEGGYFKEVVTLFHDMVEENIEPDMETYEGIIFACGKGGLHEDARKILQYMTAND 452
Query: 601 LRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
+ P+ ++ AF + +A M +G PS++T+ LL
Sbjct: 453 IVPSSKAYTGVIEAFGQAALYEEALVAFNTMHEVGSNPSIETFHSLL 499
Score = 93.6 bits (231), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 73/309 (23%), Positives = 143/309 (46%), Gaps = 6/309 (1%)
Query: 449 AMDMYKKMQ-AAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMI 507
++ ++K MQ P+ Y+++I+ LG+ G L ++F EM +QG ++ +Y +I
Sbjct: 124 SLRLFKYMQRQIWCKPNEHIYTIMISLLGREGLLDKCLEVFDEMPSQGVSRSVFSYTALI 183
Query: 508 ALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAE-AVFAEMRRKNW 566
+ Y+++L+L M+N P +TY+ V+ G E +FAEMR +
Sbjct: 184 NAYGRNGRYETSLELLDRMKNEKISPSILTYNTVINACARGGLDWEGLLGLFAEMRHEGI 243
Query: 567 VPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYH 626
PD Y L+ G +A + M G+ P++ T + L+ F ++ +L
Sbjct: 244 QPDIVTYNTLLSACAIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLEKVCD 303
Query: 627 LLQGMLNLGLKPSLQTYTLLLSCCTEARSPYD-MGFCHELMAVSGHP-AHMFLLSMPSPG 684
LL M + G P + +Y +LL ++ S + MG H++ A P A+ + + + G
Sbjct: 304 LLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFG 363
Query: 685 PDGQNVRDHVGSFLEMMHSEDRESKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPD 744
G+ D V M S + + + +++ + G +E +++ ++N+ PD
Sbjct: 364 QSGR--YDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPD 421
Query: 745 AVKEKGMSY 753
+G+ +
Sbjct: 422 METYEGIIF 430
>sp|Q9ZU27|PPR76_ARATH Pentatricopeptide repeat-containing protein At1g51965,
mitochondrial OS=Arabidopsis thaliana GN=At1g51965 PE=2
SV=1
Length = 650
Score = 162 bits (410), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 99/365 (27%), Positives = 173/365 (47%), Gaps = 45/365 (12%)
Query: 323 YSMDAYQANQVLKQLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKL 382
+ +D + N +L L A F ++++ + DE+TYT M+ +GR + L
Sbjct: 234 HKLDIFAYNMLLDALAKDEKACQVFEDMKKRHC-RRDEYTYTIMIRTMGRIGKCDEAVGL 292
Query: 383 LDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAK 442
++M+ +G NVV YN L+ + +++A+ VF +M GC P+ TY L+++
Sbjct: 293 FNEMITEGLTLNVVGYNTLMQVLAKGKMVDKAIQVFSRMVETGCRPNEYTYSLLLNLLVA 352
Query: 443 AG---FLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVN------ 493
G LD +++ K+ G+ YS ++ L K GH+ AH+LFC+M +
Sbjct: 353 EGQLVRLDGVVEISKRYMTQGI------YSYLVRTLSKLGHVSEAHRLFCDMWSFPVKGE 406
Query: 494 -----------------------------QGCIPNLVTYNIMIALQAKARNYQSALKLYR 524
+G + + + YN + + K + L+
Sbjct: 407 RDSYMSMLESLCGAGKTIEAIEMLSKIHEKGVVTDTMMYNTVFSALGKLKQISHIHDLFE 466
Query: 525 DMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAG 584
M+ G PD TY+I++ G G +DEA +F E+ R + PD Y L++ GK G
Sbjct: 467 KMKKDGPSPDIFTYNILIASFGRVGEVDEAINIFEELERSDCKPDIISYNSLINCLGKNG 526
Query: 585 NVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYT 644
+V +A ++ M + GL P+V T ++L+ F + ++ AY L + ML G +P++ TY
Sbjct: 527 DVDEAHVRFKEMQEKGLNPDVVTYSTLMECFGKTERVEMAYSLFEEMLVKGCQPNIVTYN 586
Query: 645 LLLSC 649
+LL C
Sbjct: 587 ILLDC 591
Score = 155 bits (393), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 71/189 (37%), Positives = 116/189 (61%)
Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
+ G D Y T+ LG+ +Q I+ L ++M +DG P++ TYN LI S+GR ++
Sbjct: 435 EKGVVTDTMMYNTVFSALGKLKQISHIHDLFEKMKKDGPSPDIFTYNILIASFGRVGEVD 494
Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
EA+++F++++ C+PD ++Y +LI+ K G +D A +K+MQ GL+PD TYS ++
Sbjct: 495 EAINIFEELERSDCKPDIISYNSLINCLGKNGDVDEAHVRFKEMQEKGLNPDVVTYSTLM 554
Query: 473 NCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFE 532
C GK ++ A+ LF EM+ +GC PN+VTYNI++ K A+ LY M+ G
Sbjct: 555 ECFGKTERVEMAYSLFEEMLVKGCQPNIVTYNILLDCLEKNGRTAEAVDLYSKMKQQGLT 614
Query: 533 PDKVTYSIV 541
PD +TY+++
Sbjct: 615 PDSITYTVL 623
Score = 147 bits (370), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 93/336 (27%), Positives = 160/336 (47%), Gaps = 33/336 (9%)
Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRL- 401
A+G FN + + G + Y T++ +L + + ++ +MV GC+PN TY+ L
Sbjct: 289 AVGLFNEMITE-GLTLNVVGYNTLMQVLAKGKMVDKAIQVFSRMVETGCRPNEYTYSLLL 347
Query: 402 --------------------------IHSY-----GRANYLNEALDVFKQMQVVGCEPDR 430
I+SY + +++EA +F M + +R
Sbjct: 348 NLLVAEGQLVRLDGVVEISKRYMTQGIYSYLVRTLSKLGHVSEAHRLFCDMWSFPVKGER 407
Query: 431 VTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCE 490
+Y ++++ AG A++M K+ G+ DT Y+ + + LGK + H LF +
Sbjct: 408 DSYMSMLESLCGAGKTIEAIEMLSKIHEKGVVTDTMMYNTVFSALGKLKQISHIHDLFEK 467
Query: 491 MVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGY 550
M G P++ TYNI+IA + A+ ++ +++ + +PD ++Y+ ++ LG G
Sbjct: 468 MKKDGPSPDIFTYNILIASFGRVGEVDEAINIFEELERSDCKPDIISYNSLINCLGKNGD 527
Query: 551 LDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNS 610
+DEA F EM+ K PD Y L++ +GK V A+ +E ML G +PN+ T N
Sbjct: 528 VDEAHVRFKEMQEKGLNPDVVTYSTLMECFGKTERVEMAYSLFEEMLVKGCQPNIVTYNI 587
Query: 611 LLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLL 646
LL + G+ ++A L M GL P TYT+L
Sbjct: 588 LLDCLEKNGRTAEAVDLYSKMKQQGLTPDSITYTVL 623
Score = 108 bits (269), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 113/217 (52%), Gaps = 9/217 (4%)
Query: 295 GNVVESVSRILRQWKWGPLAEEALGNTNYSMDAYQANQVLKQLQDHTVALGFFNWLRRQA 354
G +E++ + + + G + + + NT +S L +L+ + F +++
Sbjct: 421 GKTIEAIEMLSKIHEKGVVTDTMMYNTVFS--------ALGKLKQISHIHDLFEKMKKD- 471
Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
G D TY ++ GR + + +++ R C+P++++YN LI+ G+ ++EA
Sbjct: 472 GPSPDIFTYNILIASFGRVGEVDEAINIFEELERSDCKPDIISYNSLINCLGKNGDVDEA 531
Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
FK+MQ G PD VTY TL++ K +++A ++++M G P+ TY+++++C
Sbjct: 532 HVRFKEMQEKGLNPDVVTYSTLMECFGKTERVEMAYSLFEEMLVKGCQPNIVTYNILLDC 591
Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQA 511
L K G A L+ +M QG P+ +TY ++ LQ+
Sbjct: 592 LEKNGRTAEAVDLYSKMKQQGLTPDSITYTVLERLQS 628
Score = 105 bits (263), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 102/458 (22%), Positives = 201/458 (43%), Gaps = 50/458 (10%)
Query: 329 QANQVLKQLQDHTVALGFFNWLRRQAGF-KHDEHTYTTMVGILGRAR---QFGAINKLLD 384
+A+++LK L +A+ FF + + ++D Y ++ IL R+ +F + +LD
Sbjct: 101 EASEILKSLNSPLLAVEFFKLVPSLCPYSQNDPFLYNRIILILSRSNLPDRFDRVRSILD 160
Query: 385 QMVRDGCQPNV--------------------------------VTYNRLIHSYGRANYLN 412
MV+ N+ TY L+ +Y R+ +
Sbjct: 161 SMVKSNVHGNISTVNILIGFFGNTEDLQMCLRLVKKWDLKMNSFTYKCLLQAYLRSRDYS 220
Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
+A DV+ +++ G + D Y L+D AK + A +++ M+ D +TY+++I
Sbjct: 221 KAFDVYCEIRRGGHKLDIFAYNMLLDALAKD---EKACQVFEDMKKRHCRRDEYTYTIMI 277
Query: 473 NCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFE 532
+G+ G A LF EM+ +G N+V YN ++ + AK + A++++ M G
Sbjct: 278 RTMGRIGKCDEAVGLFNEMITEGLTLNVVGYNTLMQVLAKGKMVDKAIQVFSRMVETGCR 337
Query: 533 PDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEW 592
P++ TYS+++ +L G L + V +R + +Y LV K G+V +A
Sbjct: 338 PNEYTYSLLLNLLVAEGQLVRLDGVVEISKR---YMTQGIYSYLVRTLSKLGHVSEAHRL 394
Query: 593 YEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTE 652
+ M ++ + S+L + G+ +A +L + G+ Y + S +
Sbjct: 395 FCDMWSFPVKGERDSYMSMLESLCGAGKTIEAIEMLSKIHEKGVVTDTMMYNTVFSALGK 454
Query: 653 ARSPYDMGFCHELMAVSGHPAHMFL--LSMPSPGPDGQNVRDHVGSFLEMMHSEDRESKR 710
+ + E M G +F + + S G G+ V + + F E+ E + K
Sbjct: 455 LKQISHIHDLFEKMKKDGPSPDIFTYNILIASFGRVGE-VDEAINIFEEL---ERSDCKP 510
Query: 711 GLV--DAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAV 746
++ +++++ L K+G +EA ++ +K + PD V
Sbjct: 511 DIISYNSLINCLGKNGDVDEAHVRFKEMQEKGLNPDVV 548
>sp|Q8L844|PP413_ARATH Pentatricopeptide repeat-containing protein At5g42310,
mitochondrial OS=Arabidopsis thaliana GN=At5g42310 PE=2
SV=1
Length = 709
Score = 161 bits (408), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 91/316 (28%), Positives = 157/316 (49%)
Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
G DEHTY+ ++ A ++ + +L +M QPN ++RL+ + +
Sbjct: 369 GVSPDEHTYSLLIDAYVNAGRWESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKT 428
Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
V K+M+ +G +PDR Y +ID K LD AM + +M + G+ PD T++ +I+C
Sbjct: 429 FQVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDC 488
Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPD 534
K G A ++F M +GC+P TYNIMI + +L M++ G P+
Sbjct: 489 HCKHGRHIVAEEMFEAMERRGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPN 548
Query: 535 KVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYE 594
VT++ +++V G G ++A EM+ P +Y L++ + + G +A +
Sbjct: 549 VVTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFR 608
Query: 595 AMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEAR 654
M GL+P++ NSL++AF + ++A+ +LQ M G+KP + TYT L+
Sbjct: 609 VMTSDGLKPSLLALNSLINAFGEDRRDAEAFAVLQYMKENGVKPDVVTYTTLMKALIRVD 668
Query: 655 SPYDMGFCHELMAVSG 670
+ +E M +SG
Sbjct: 669 KFQKVPVVYEEMIMSG 684
Score = 134 bits (337), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 89/332 (26%), Positives = 158/332 (47%), Gaps = 21/332 (6%)
Query: 325 MDAY-------QANQVLKQLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFG 377
+DAY A VLK+++ V F + R AGF+ T
Sbjct: 381 IDAYVNAGRWESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTF----------- 429
Query: 378 AINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLI 437
++L +M G +P+ YN +I ++G+ N L+ A+ F +M G EPDRVT+ TLI
Sbjct: 430 ---QVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLI 486
Query: 438 DIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCI 497
D H K G VA +M++ M+ G P TY+++IN G +L +M +QG +
Sbjct: 487 DCHCKHGRHIVAEEMFEAMERRGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGIL 546
Query: 498 PNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAV 557
PN+VT+ ++ + K+ + A++ +M++ G +P Y+ ++ G ++A
Sbjct: 547 PNVVTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNA 606
Query: 558 FAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLR 617
F M P L++ +G+ +A+ + M + G++P+V T +L+ A +R
Sbjct: 607 FRVMTSDGLKPSLLALNSLINAFGEDRRDAEAFAVLQYMKENGVKPDVVTYTTLMKALIR 666
Query: 618 VGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSC 649
V + + + M+ G KP + ++L S
Sbjct: 667 VDKFQKVPVVYEEMIMSGCKPDRKARSMLRSA 698
Score = 125 bits (315), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 79/297 (26%), Positives = 140/297 (47%), Gaps = 4/297 (1%)
Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
G T +++ L + + L +++ + G +P YN L+ Y + L +A
Sbjct: 299 GLSAKTATLVSIISALADSGRTLEAEALFEELRQSGIKPRTRAYNALLKGYVKTGPLKDA 358
Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
+ +M+ G PD TY LID + AG + A + K+M+A + P++F +S ++
Sbjct: 359 ESMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWESARIVLKEMEAGDVQPNSFVFSRLLAG 418
Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPD 534
G Q Q+ EM + G P+ YN++I K A+ + M + G EPD
Sbjct: 419 FRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPD 478
Query: 535 KVTYSIVMEVLGHC--GYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEW 592
+VT++ +++ HC G AE +F M R+ +P Y ++++ +G
Sbjct: 479 RVTWNTLIDC--HCKHGRHIVAEEMFEAMERRGCLPCATTYNIMINSYGDQERWDDMKRL 536
Query: 593 YEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSC 649
M G+ PNV T +L+ + + G+ +DA L+ M ++GLKPS Y L++
Sbjct: 537 LGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKPSSTMYNALINA 593
Score = 125 bits (313), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 81/303 (26%), Positives = 144/303 (47%)
Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
RQ+G K Y ++ + ++ +M + G P+ TY+ LI +Y A
Sbjct: 331 RQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAYVNAGRW 390
Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
A V K+M+ +P+ + L+ G + K+M++ G+ PD Y+V+
Sbjct: 391 ESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVV 450
Query: 472 INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF 531
I+ GK L A F M+++G P+ VT+N +I K + A +++ M+ G
Sbjct: 451 IDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRGC 510
Query: 532 EPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWE 591
P TY+I++ G D+ + + +M+ + +P+ + LVD++GK+G A E
Sbjct: 511 LPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIE 570
Query: 592 WYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCT 651
E M GL+P+ N+L++A+ + G A + + M + GLKPSL L++
Sbjct: 571 CLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRVMTSDGLKPSLLALNSLINAFG 630
Query: 652 EAR 654
E R
Sbjct: 631 EDR 633
Score = 110 bits (275), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 101/476 (21%), Positives = 199/476 (41%), Gaps = 47/476 (9%)
Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAIN--KLLDQMVRDGCQPNVVTYNRLIHSYGRAN 409
RQ G++ D Y+ ++ L R+ + ++ +L ++ RD + +V N +I + ++
Sbjct: 224 RQDGYQSDFVNYSLVIQSLTRSNKIDSVMLLRLYKEIERDKLELDVQLVNDIIMGFAKSG 283
Query: 410 YLNEALDV-----------------------------------FKQMQVVGCEPDRVTYC 434
++AL + F++++ G +P Y
Sbjct: 284 DPSKALQLLGMAQATGLSAKTATLVSIISALADSGRTLEAEALFEELRQSGIKPRTRAYN 343
Query: 435 TLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQ 494
L+ + K G L A M +M+ G+SPD TYS++I+ AG ++A + EM
Sbjct: 344 ALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWESARIVLKEMEAG 403
Query: 495 GCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEA 554
PN ++ ++A +Q ++ ++M++ G +PD+ Y++V++ G LD A
Sbjct: 404 DVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHA 463
Query: 555 EAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSA 614
F M + PD + L+D K G A E +EAM + G P T N ++++
Sbjct: 464 MTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRGCLPCATTYNIMINS 523
Query: 615 FLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGFCHELMAVSGHPAH 674
+ + D LL M + G+ P++ T+T L+ ++ D C E M G
Sbjct: 524 YGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKPS 583
Query: 675 MFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRESKRGLVDAVVDFLHKSGLKEEAGSVWE 734
+ + + + + + +M S+ + ++++++ + EA +V +
Sbjct: 584 STMYNALINAYAQRGLSEQAVNAFRVMTSDGLKPSLLALNSLINAFGEDRRDAEAFAVLQ 643
Query: 735 VAAQKNVYPDAVKEKGMSYWLINLHVMSDGTAVIALSRTLAWFRKQMLISGVGPSR 790
+ V PD V + LI + V ++M++SG P R
Sbjct: 644 YMKENGVKPDVVTYTTLMKALIRVDKFQKVPVVY----------EEMIMSGCKPDR 689
Score = 108 bits (270), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 78/296 (26%), Positives = 134/296 (45%), Gaps = 3/296 (1%)
Query: 362 TYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA--LDVFK 419
TY ++G R L+ +M +DG Q + V Y+ +I S R+N ++ L ++K
Sbjct: 199 TYNALIGACARNNDIEKALNLIAKMRQDGYQSDFVNYSLVIQSLTRSNKIDSVMLLRLYK 258
Query: 420 QMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAG 479
+++ E D +I AK+G A+ + QA GLS T T II+ L +G
Sbjct: 259 EIERDKLELDVQLVNDIIMGFAKSGDPSKALQLLGMAQATGLSAKTATLVSIISALADSG 318
Query: 480 HLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYS 539
A LF E+ G P YN ++ K + A + +M+ G PD+ TYS
Sbjct: 319 RTLEAEALFEELRQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYS 378
Query: 540 IVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQA 599
++++ + G + A V EM + P+ V+ L+ + G +K ++ + M
Sbjct: 379 LLIDAYVNAGRWESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSI 438
Query: 600 GLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSC-CTEAR 654
G++P+ N ++ F + L A ML+ G++P T+ L+ C C R
Sbjct: 439 GVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGR 494
Score = 102 bits (253), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 82/325 (25%), Positives = 150/325 (46%), Gaps = 13/325 (4%)
Query: 342 VALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRL 401
+A +WL++ E Y+ ++ LGR+ + LL Q + P +TYN L
Sbjct: 149 LAYAVVSWLQKHNLCFSYELLYSILIHALGRSEKLYEAF-LLSQ--KQTLTP--LTYNAL 203
Query: 402 IHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAM--DMYKKMQAA 459
I + R N + +AL++ +M+ G + D V Y +I ++ +D M +YK+++
Sbjct: 204 IGACARNNDIEKALNLIAKMRQDGYQSDFVNYSLVIQSLTRSNKIDSVMLLRLYKEIERD 263
Query: 460 GLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSA 519
L D + II K+G A QL G T +I+ A + A
Sbjct: 264 KLELDVQLVNDIIMGFAKSGDPSKALQLLGMAQATGLSAKTATLVSIISALADSGRTLEA 323
Query: 520 LKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDL 579
L+ +++ +G +P Y+ +++ G L +AE++ +EM ++ PDE Y LL+D
Sbjct: 324 EALFEELRQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDA 383
Query: 580 WGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPS 639
+ AG A + M ++PN + LL+ F G+ + +L+ M ++G+KP
Sbjct: 384 YVNAGRWESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPD 443
Query: 640 LQTYTLLL------SCCTEARSPYD 658
Q Y +++ +C A + +D
Sbjct: 444 RQFYNVVIDTFGKFNCLDHAMTTFD 468
Score = 99.4 bits (246), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 102/208 (49%), Gaps = 1/208 (0%)
Query: 340 HTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYN 399
H VA F + R+ G TY M+ G ++ + +LL +M G PNVVT+
Sbjct: 495 HIVAEEMFEAMERR-GCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHT 553
Query: 400 RLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAA 459
L+ YG++ N+A++ ++M+ VG +P Y LI+ +A+ G + A++ ++ M +
Sbjct: 554 TLVDVYGKSGRFNDAIECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRVMTSD 613
Query: 460 GLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSA 519
GL P + +IN G+ A + M G P++VTY ++ + +Q
Sbjct: 614 GLKPSLLALNSLINAFGEDRRDAEAFAVLQYMKENGVKPDVVTYTTLMKALIRVDKFQKV 673
Query: 520 LKLYRDMQNAGFEPDKVTYSIVMEVLGH 547
+Y +M +G +PD+ S++ L +
Sbjct: 674 PVVYEEMIMSGCKPDRKARSMLRSALRY 701
>sp|Q5G1S8|PP241_ARATH Pentatricopeptide repeat-containing protein At3g18110,
chloroplastic OS=Arabidopsis thaliana GN=EMB1270 PE=2
SV=2
Length = 1440
Score = 161 bits (408), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 99/365 (27%), Positives = 180/365 (49%), Gaps = 5/365 (1%)
Query: 333 VLKQLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQ 392
VL + ++A+ F R + Y M+G+ R+ +F +L+D M + GC
Sbjct: 200 VLGRWNQESLAVEIFT--RAEPTVGDRVQVYNAMMGVYSRSGKFSKAQELVDAMRQRGCV 257
Query: 393 PNVVTYNRLIHSYGRANYL--NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAM 450
P+++++N LI++ ++ L N A+++ ++ G PD +TY TL+ ++ LD A+
Sbjct: 258 PDLISFNTLINARLKSGGLTPNLAVELLDMVRNSGLRPDAITYNTLLSACSRDSNLDGAV 317
Query: 451 DMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQ 510
+++ M+A PD +TY+ +I+ G+ G A +LF E+ +G P+ VTYN ++
Sbjct: 318 KVFEDMEAHRCQPDLWTYNAMISVYGRCGLAAEAERLFMELELKGFFPDAVTYNSLLYAF 377
Query: 511 AKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMR-RKNWVPD 569
A+ RN + ++Y+ MQ GF D++TY+ ++ + G G LD A ++ +M+ PD
Sbjct: 378 ARERNTEKVKEVYQQMQKMGFGKDEMTYNTIIHMYGKQGQLDLALQLYKDMKGLSGRNPD 437
Query: 570 EPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQ 629
Y +L+D GKA +A ML G++P + T ++L+ + + G+ +A
Sbjct: 438 AITYTVLIDSLGKANRTVEAAALMSEMLDVGIKPTLQTYSALICGYAKAGKREEAEDTFS 497
Query: 630 GMLNLGLKPSLQTYTLLLSCCTEARSPYDMGFCHELMAVSGHPAHMFLLSMPSPGPDGQN 689
ML G KP Y+++L + M GH L + G +N
Sbjct: 498 CMLRSGTKPDNLAYSVMLDVLLRGNETRKAWGLYRDMISDGHTPSYTLYELMILGLMKEN 557
Query: 690 VRDHV 694
D +
Sbjct: 558 RSDDI 562
Score = 142 bits (357), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 86/289 (29%), Positives = 138/289 (47%), Gaps = 2/289 (0%)
Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
R +G + D TY T++ R K+ + M CQP++ TYN +I YGR
Sbjct: 289 RNSGLRPDAITYNTLLSACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMISVYGRCGLA 348
Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
EA +F ++++ G PD VTY +L+ A+ + ++Y++MQ G D TY+ I
Sbjct: 349 AEAERLFMELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTYNTI 408
Query: 472 INCLGKAGHLQAAHQLFCEMVN-QGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAG 530
I+ GK G L A QL+ +M G P+ +TY ++I KA A L +M + G
Sbjct: 409 IHMYGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRTVEAAALMSEMLDVG 468
Query: 531 FEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAW 590
+P TYS ++ G +EAE F+ M R PD Y +++D+ + RKAW
Sbjct: 469 IKPTLQTYSALICGYAKAGKREEAEDTFSCMLRSGTKPDNLAYSVMLDVLLRGNETRKAW 528
Query: 591 EWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNL-GLKP 638
Y M+ G P+ ++ ++ + D ++ M L G+ P
Sbjct: 529 GLYRDMISDGHTPSYTLYELMILGLMKENRSDDIQKTIRDMEELCGMNP 577
Score = 139 bits (350), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 82/308 (26%), Positives = 161/308 (52%), Gaps = 4/308 (1%)
Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLI 402
AL F WL + + ++G+LGR Q ++ + V YN ++
Sbjct: 174 ALEVFEWLNLRHWHSPNARMVAAILGVLGRWNQESLAVEIFTR-AEPTVGDRVQVYNAMM 232
Query: 403 HSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFL--DVAMDMYKKMQAAG 460
Y R+ ++A ++ M+ GC PD +++ TLI+ K+G L ++A+++ ++ +G
Sbjct: 233 GVYSRSGKFSKAQELVDAMRQRGCVPDLISFNTLINARLKSGGLTPNLAVELLDMVRNSG 292
Query: 461 LSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSAL 520
L PD TY+ +++ + +L A ++F +M C P+L TYN MI++ + A
Sbjct: 293 LRPDAITYNTLLSACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMISVYGRCGLAAEAE 352
Query: 521 KLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLW 580
+L+ +++ GF PD VTY+ ++ ++ + V+ +M++ + DE Y ++ ++
Sbjct: 353 RLFMELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTYNTIIHMY 412
Query: 581 GKAGNVRKAWEWYEAML-QAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPS 639
GK G + A + Y+ M +G P+ T L+ + + + +A L+ ML++G+KP+
Sbjct: 413 GKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRTVEAAALMSEMLDVGIKPT 472
Query: 640 LQTYTLLL 647
LQTY+ L+
Sbjct: 473 LQTYSALI 480
Score = 117 bits (294), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 75/307 (24%), Positives = 146/307 (47%)
Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
RQ+G D T+ +++ + + + + M+RDG P V + N L+H+ L
Sbjct: 779 RQSGRTPDLKTWNSLMSAYAQCGCYERARAIFNTMMRDGPSPTVESINILLHALCVDGRL 838
Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
E V +++Q +G + + + ++D A+AG + +Y M+AAG P Y ++
Sbjct: 839 EELYVVVEELQDMGFKISKSSILLMLDAFARAGNIFEVKKIYSSMKAAGYLPTIRLYRMM 898
Query: 472 INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF 531
I L K ++ A + EM L +N M+ + +Y+ +++Y+ ++ G
Sbjct: 899 IELLCKGKRVRDAEIMVSEMEEANFKVELAIWNSMLKMYTAIEDYKKTVQVYQRIKETGL 958
Query: 532 EPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWE 591
EPD+ TY+ ++ + +E + +MR P Y L+ +GK + +A +
Sbjct: 959 EPDETTYNTLIIMYCRDRRPEEGYLLMQQMRNLGLDPKLDTYKSLISAFGKQKCLEQAEQ 1018
Query: 592 WYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCT 651
+E +L GL+ + ++++ G S A LLQ M N G++P+L T LL+ +
Sbjct: 1019 LFEELLSKGLKLDRSFYHTMMKISRDSGSDSKAEKLLQMMKNAGIEPTLATMHLLMVSYS 1078
Query: 652 EARSPYD 658
+ +P +
Sbjct: 1079 SSGNPQE 1085
Score = 109 bits (273), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 106/501 (21%), Positives = 204/501 (40%), Gaps = 51/501 (10%)
Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
+ AG+ Y M+ +L + ++ ++ +M + + +N ++ Y
Sbjct: 884 KAAGYLPTIRLYRMMIELLCKGKRVRDAEIMVSEMEEANFKVELAIWNSMLKMYTAIEDY 943
Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
+ + V+++++ G EPD TY TLI ++ + + + ++M+ GL P TY +
Sbjct: 944 KKTVQVYQRIKETGLEPDETTYNTLIIMYCRDRRPEEGYLLMQQMRNLGLDPKLDTYKSL 1003
Query: 472 INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF 531
I+ GK L+ A QLF E++++G + Y+ M+ + + + A KL + M+NAG
Sbjct: 1004 ISAFGKQKCLEQAEQLFEELLSKGLKLDRSFYHTMMKISRDSGSDSKAEKLLQMMKNAGI 1063
Query: 532 EPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWE 591
EP T ++M G EAE V + ++ Y ++D + ++ + E
Sbjct: 1064 EPTLATMHLLMVSYSSSGNPQEAEKVLSNLKDTEVELTTLPYSSVIDAYLRSKDYNSGIE 1123
Query: 592 WYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCT 651
M + GL P+ + + + F+R S K ++ LL
Sbjct: 1124 RLLEMKKEGLEPD----HRIWTCFVRAASFS--------------KEKIEVMLLL----- 1160
Query: 652 EARSPYDMGFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRESKRG 711
++ D+GF + ++G P + V + E + S + +
Sbjct: 1161 --KALEDIGFDLPIRLLAGRPELLV---------------SEVDGWFEKLKSIEDNAALN 1203
Query: 712 LVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAVKEKGMSYWLINLHVMSDGTAVIALS 771
V+A+++ L L+ A V+++ ++ ++ V W + +S G A++AL+
Sbjct: 1204 FVNALLNLLWAFELRATASWVFQLGIKRGIFSLDVFRVADKDWGADFRRLSGGAALVALT 1263
Query: 772 RTLAWFRKQMLISGVG----PSRIDIVTGWGRRSRVTGTSLVRQAVQELLHMFSFPFFTE 827
W S G P + ++TG + G SL + L M S PF
Sbjct: 1264 ---LWLDHMQDASLEGYPESPKSVVLITG---TAEYNGISLDKTLKACLWEMGS-PFLPC 1316
Query: 828 NGNSGCFVGCGEPLNKWLLQS 848
+G V L WL S
Sbjct: 1317 KTRTGLLVAKAHSLRMWLKDS 1337
Score = 108 bits (269), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 73/296 (24%), Positives = 140/296 (47%), Gaps = 19/296 (6%)
Query: 390 GCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVA 449
C P Y +I +YG+ +A V ++ G PD T+ +L+ +A+ G + A
Sbjct: 750 ACSP---MYTDIIEAYGKQKLWQKAESVVGNLRQSGRTPDLKTWNSLMSAYAQCGCYERA 806
Query: 450 MDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIAL 509
++ M G SP + +++++ L G L+ + + E+ + G + + +M+
Sbjct: 807 RAIFNTMMRDGPSPTVESINILLHALCVDGRLEELYVVVEELQDMGFKISKSSILLMLDA 866
Query: 510 QAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPD 569
A+A N K+Y M+ AG+ P Y +++E+L + +AE + +EM N+ +
Sbjct: 867 FARAGNIFEVKKIYSSMKAAGYLPTIRLYRMMIELLCKGKRVRDAEIMVSEMEEANFKVE 926
Query: 570 EPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQ 629
++ ++ ++ + +K + Y+ + + GL P+ T N+L+ + R + + Y L+Q
Sbjct: 927 LAIWNSMLKMYTAIEDYKKTVQVYQRIKETGLEPDETTYNTLIIMYCRDRRPEEGYLLMQ 986
Query: 630 GMLNLGLKPSLQTYTLLLS------CCTEARSPY----------DMGFCHELMAVS 669
M NLGL P L TY L+S C +A + D F H +M +S
Sbjct: 987 QMRNLGLDPKLDTYKSLISAFGKQKCLEQAEQLFEELLSKGLKLDRSFYHTMMKIS 1042
Score = 74.7 bits (182), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 74/345 (21%), Positives = 143/345 (41%), Gaps = 11/345 (3%)
Query: 369 ILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEP 428
+L + F + L + +G + T ++ SY + +EA ++ + ++
Sbjct: 583 VLVKGECFDLAARQLKVAITNGYELENDTLLSILGSYSSSGRHSEAFELLEFLKEHASGS 642
Query: 429 DRVTYCTLIDIHAKAGFLDVAMDMYKK---MQAAGLSPDTFTYSVIINCLGKAGHLQAAH 485
R+ LI +H K L A+D Y + T Y +++C H A
Sbjct: 643 KRLITEALIVLHCKVNNLSAALDEYFADPCVHGWCFGSSTM-YETLLHCCVANEHYAEAS 701
Query: 486 QLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFE-PDKVTYSIVMEV 544
Q+F ++ GC + M+ + K ++A ++ + GF Y+ ++E
Sbjct: 702 QVFSDLRLSGCEASESVCKSMVVVYCKLGFPETAHQVVNQAETKGFHFACSPMYTDIIEA 761
Query: 545 LGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPN 604
G +AE+V +R+ PD + L+ + + G +A + M++ G P
Sbjct: 762 YGKQKLWQKAESVVGNLRQSGRTPDLKTWNSLMSAYAQCGCYERARAIFNTMMRDGPSPT 821
Query: 605 VPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGFCHE 664
V + N LL A G+L + Y +++ + ++G K S + L+L A + +++ +
Sbjct: 822 VESINILLHALCVDGRLEELYVVVEELQDMGFKISKSSILLMLDAFARAGNIFEVKKIYS 881
Query: 665 LMAVSGH-PAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRES 708
M +G+ P M G+ VRD E+M SE E+
Sbjct: 882 SMKAAGYLPTIRLYRMMIELLCKGKRVRDA-----EIMVSEMEEA 921
>sp|Q9LN22|PPR54_ARATH Pentatricopeptide repeat-containing protein At1g20300,
mitochondrial OS=Arabidopsis thaliana GN=At1g20300 PE=2
SV=1
Length = 537
Score = 161 bits (407), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 94/343 (27%), Positives = 161/343 (46%), Gaps = 39/343 (11%)
Query: 343 ALGFFNWLRRQAGFKHDE-HTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRL 401
+L FFNW + + H H Y M+ + G+ RQF L+D M + ++ T+ L
Sbjct: 133 SLAFFNWATSRDDYDHKSPHPYNEMIDLSGKVRQFDLAWHLIDLMKSRNVEISIETFTIL 192
Query: 402 IHSYGRANYLNEALDVFKQMQVVGC----------------------------------E 427
I Y RA +EA+ F +M+ GC E
Sbjct: 193 IRRYVRAGLASEAVHCFNRMEDYGCVPDKIAFSIVISNLSRKRRASEAQSFFDSLKDRFE 252
Query: 428 PDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQL 487
PD + Y L+ +AG + A ++K+M+ AG+ P+ +TYS++I+ L + G + AH +
Sbjct: 253 PDVIVYTNLVRGWCRAGEISEAEKVFKEMKLAGIEPNVYTYSIVIDALCRCGQISRAHDV 312
Query: 488 FCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGH 547
F +M++ GC PN +T+N ++ + KA + L++Y M+ G EPD +TY+ ++E H
Sbjct: 313 FADMLDSGCAPNAITFNNLMRVHVKAGRTEKVLQVYNQMKKLGCEPDTITYNFLIE--AH 370
Query: 548 C--GYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNV 605
C L+ A V M +K + + + K +V A Y M++A PN
Sbjct: 371 CRDENLENAVKVLNTMIKKKCEVNASTFNTIFRYIEKKRDVNGAHRMYSKMMEAKCEPNT 430
Query: 606 PTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
T N L+ F+ + + M + ++P++ TY LL++
Sbjct: 431 VTYNILMRMFVGSKSTDMVLKMKKEMDDKEVEPNVNTYRLLVT 473
Score = 143 bits (361), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 97/350 (27%), Positives = 172/350 (49%), Gaps = 14/350 (4%)
Query: 298 VESVSRILRQWKWGPLAEEALGNTNYSMDAYQA--NQV--------LKQLQDHTVALGFF 347
+E+ + ++R++ LA EA+ N M+ Y +++ L + + + A FF
Sbjct: 186 IETFTILIRRYVRAGLASEAVHCFN-RMEDYGCVPDKIAFSIVISNLSRKRRASEAQSFF 244
Query: 348 NWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGR 407
+ L+ + F+ D YT +V RA + K+ +M G +PNV TY+ +I + R
Sbjct: 245 DSLKDR--FEPDVIVYTNLVRGWCRAGEISEAEKVFKEMKLAGIEPNVYTYSIVIDALCR 302
Query: 408 ANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFT 467
++ A DVF M GC P+ +T+ L+ +H KAG + + +Y +M+ G PDT T
Sbjct: 303 CGQISRAHDVFADMLDSGCAPNAITFNNLMRVHVKAGRTEKVLQVYNQMKKLGCEPDTIT 362
Query: 468 YSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQ 527
Y+ +I + +L+ A ++ M+ + C N T+N + K R+ A ++Y M
Sbjct: 363 YNFLIEAHCRDENLENAVKVLNTMIKKKCEVNASTFNTIFRYIEKKRDVNGAHRMYSKMM 422
Query: 528 NAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVR 587
A EP+ VTY+I+M + D + EM K P+ Y LLV ++ G+
Sbjct: 423 EAKCEPNTVTYNILMRMFVGSKSTDMVLKMKKEMDDKEVEPNVNTYRLLVTMFCGMGHWN 482
Query: 588 KAWEWYEAMLQAG-LRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGL 636
A++ ++ M++ L P++ +L+ R GQL L++ M+ GL
Sbjct: 483 NAYKLFKEMVEEKCLTPSLSLYEMVLAQLRRAGQLKKHEELVEKMIQKGL 532
Score = 62.0 bits (149), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/137 (24%), Positives = 69/137 (50%), Gaps = 1/137 (0%)
Query: 362 TYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQM 421
T+ T+ + + R +++ +M+ C+PN VTYN L+ + + + L + K+M
Sbjct: 397 TFNTIFRYIEKKRDVNGAHRMYSKMMEAKCEPNTVTYNILMRMFVGSKSTDMVLKMKKEM 456
Query: 422 QVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKM-QAAGLSPDTFTYSVIINCLGKAGH 480
EP+ TY L+ + G + A ++K+M + L+P Y +++ L +AG
Sbjct: 457 DDKEVEPNVNTYRLLVTMFCGMGHWNNAYKLFKEMVEEKCLTPSLSLYEMVLAQLRRAGQ 516
Query: 481 LQAAHQLFCEMVNQGCI 497
L+ +L +M+ +G +
Sbjct: 517 LKKHEELVEKMIQKGLV 533
>sp|Q3EDF8|PPR28_ARATH Pentatricopeptide repeat-containing protein At1g09900
OS=Arabidopsis thaliana GN=At1g09900 PE=2 SV=1
Length = 598
Score = 161 bits (407), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 110/434 (25%), Positives = 210/434 (48%), Gaps = 15/434 (3%)
Query: 320 NTNYSMDAYQANQVLKQLQDHTVALGFFNWLRRQA--GFKHDEHTYTTMVGILGRARQFG 377
N++++++ ++N L+Q+ F +L G D TT++ R +
Sbjct: 95 NSSFALEDVESNNHLRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTR 154
Query: 378 AINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLI 437
K+L+ + G P+V+TYN +I Y +A +N AL V +M V PD VTY T++
Sbjct: 155 KAAKILEILEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRMSV---SPDVVTYNTIL 211
Query: 438 DIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCI 497
+G L AM++ +M PD TY+++I + + A +L EM ++GC
Sbjct: 212 RSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCT 271
Query: 498 PNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAV 557
P++VTYN+++ K A+K DM ++G +P+ +T++I++ + G +AE +
Sbjct: 272 PDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKL 331
Query: 558 FAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLR 617
A+M RK + P + +L++ + G + +A + E M Q G +PN + N LL F +
Sbjct: 332 LADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCK 391
Query: 618 VGQLSDAYHLLQGMLNLGLKPSLQTY-TLLLSCCTEARSPYDMGFCHELMAVSGHPA--- 673
++ A L+ M++ G P + TY T+L + C + + + ++L + P
Sbjct: 392 EKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLIT 451
Query: 674 -HMFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRESKRGLVDAVVDFLHKSGLKEEAGSV 732
+ + + G G+ ++ L+ M ++D + ++V L + G +EA
Sbjct: 452 YNTVIDGLAKAGKTGKAIK-----LLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKF 506
Query: 733 WEVAAQKNVYPDAV 746
+ + + P+AV
Sbjct: 507 FHEFERMGIRPNAV 520
Score = 154 bits (388), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 103/371 (27%), Positives = 167/371 (45%), Gaps = 37/371 (9%)
Query: 314 AEEALGNTNYSMDAYQANQVLKQLQDHTVALGFFNWLRR--QAGFKHDEHTYTTMVGILG 371
A L + S D N +L+ L D L R Q D TYT ++
Sbjct: 191 ALSVLDRMSVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATC 250
Query: 372 RARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRV 431
R G KLLD+M GC P+VVTYN L++ + L+EA+ M GC+P+ +
Sbjct: 251 RDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVI 310
Query: 432 TY-------CT----------------------------LIDIHAKAGFLDVAMDMYKKM 456
T+ C+ LI+ + G L A+D+ +KM
Sbjct: 311 THNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKM 370
Query: 457 QAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNY 516
G P++ +Y+ +++ K + A + MV++GC P++VTYN M+ K
Sbjct: 371 PQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKV 430
Query: 517 QSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLL 576
+ A+++ + + G P +TY+ V++ L G +A + EMR K+ PD Y L
Sbjct: 431 EDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSL 490
Query: 577 VDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGL 636
V + G V +A +++ + G+RPN T NS++ + Q A L M+N G
Sbjct: 491 VGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGC 550
Query: 637 KPSLQTYTLLL 647
KP+ +YT+L+
Sbjct: 551 KPNETSYTILI 561
Score = 137 bits (344), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 79/256 (30%), Positives = 133/256 (51%)
Query: 381 KLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIH 440
KLL M+R G P+VVT+N LI+ R L A+D+ ++M GC+P+ ++Y L+
Sbjct: 330 KLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGF 389
Query: 441 AKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNL 500
K +D A++ ++M + G PD TY+ ++ L K G ++ A ++ ++ ++GC P L
Sbjct: 390 CKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVL 449
Query: 501 VTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAE 560
+TYN +I AKA A+KL +M+ +PD +TYS ++ L G +DEA F E
Sbjct: 450 ITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHE 509
Query: 561 MRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQ 620
R P+ + ++ K+ +A ++ M+ G +PN + L+ G
Sbjct: 510 FERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGM 569
Query: 621 LSDAYHLLQGMLNLGL 636
+A LL + N GL
Sbjct: 570 AKEALELLNELCNKGL 585
Score = 124 bits (312), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 69/254 (27%), Positives = 127/254 (50%), Gaps = 2/254 (0%)
Query: 348 NWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGR 407
+ LR+ GF T+ ++ L R G +L++M + GCQPN ++YN L+H + +
Sbjct: 334 DMLRK--GFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCK 391
Query: 408 ANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFT 467
++ A++ ++M GC PD VTY T++ K G ++ A+++ ++ + G SP T
Sbjct: 392 EKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLIT 451
Query: 468 YSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQ 527
Y+ +I+ L KAG A +L EM + P+ +TY+ ++ ++ A+K + + +
Sbjct: 452 YNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFE 511
Query: 528 NAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVR 587
G P+ VT++ +M L D A M + P+E Y +L++ G +
Sbjct: 512 RMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAK 571
Query: 588 KAWEWYEAMLQAGL 601
+A E + GL
Sbjct: 572 EALELLNELCNKGL 585
>sp|Q9LUR2|PP238_ARATH Putative pentatricopeptide repeat-containing protein At3g16710,
mitochondrial OS=Arabidopsis thaliana GN=At3g16710 PE=3
SV=1
Length = 507
Score = 160 bits (404), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 94/296 (31%), Positives = 153/296 (51%), Gaps = 4/296 (1%)
Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
GFK + TYTT++ L + R +L +QM +G +PNVVTYN L+ +A
Sbjct: 183 GFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDA 242
Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
+ + M EP+ +T+ LID K G L A ++Y M + PD FTY +IN
Sbjct: 243 AWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLING 302
Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPD 534
L G L A Q+F M GC PN V Y +I K++ + +K++ +M G +
Sbjct: 303 LCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVAN 362
Query: 535 KVTYSIVMEVLGHC--GYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEW 592
+TY+++++ G+C G D A+ VF +M + PD Y +L+D G V KA
Sbjct: 363 TITYTVLIQ--GYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMI 420
Query: 593 YEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
+E M + + N+ T ++ ++G++ DA+ L + + G+KP++ TYT ++S
Sbjct: 421 FEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMIS 476
Score = 125 bits (313), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 75/282 (26%), Positives = 141/282 (50%)
Query: 362 TYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQM 421
TY +V L ++G LL M++ +PNV+T+ LI ++ + L EA +++ M
Sbjct: 225 TYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVM 284
Query: 422 QVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHL 481
+ PD TY +LI+ G LD A M+ M+ G P+ Y+ +I+ K+ +
Sbjct: 285 IQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRV 344
Query: 482 QAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIV 541
+ ++F EM +G + N +TY ++I A +++ M + PD TY+++
Sbjct: 345 EDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVL 404
Query: 542 MEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGL 601
++ L G +++A +F MR++ + Y +++ K G V A++ + ++ G+
Sbjct: 405 LDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGM 464
Query: 602 RPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTY 643
+PNV T +++S F R G + +A L + M G P+ Y
Sbjct: 465 KPNVITYTTMISGFCRRGLIHEADSLFKKMKEDGFLPNESVY 506
Score = 122 bits (305), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 78/271 (28%), Positives = 133/271 (49%), Gaps = 2/271 (0%)
Query: 382 LLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHA 441
L +M++ G +P++VT+ L++ Y N + +A+ +F Q+ +G +P+ VTY TLI
Sbjct: 140 FLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLC 199
Query: 442 KAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLV 501
K L+ A++++ +M G P+ TY+ ++ L + G A L +M+ + PN++
Sbjct: 200 KNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVI 259
Query: 502 TYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEM 561
T+ +I K A +LY M PD TY ++ L G LDEA +F M
Sbjct: 260 TFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLM 319
Query: 562 RRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQL 621
R P+E +Y L+ + K+ V + + M Q G+ N T L+ + VG+
Sbjct: 320 ERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRP 379
Query: 622 SDAYHLLQGMLNLGLKPSLQTYTLLLS--CC 650
A + M + P ++TY +LL CC
Sbjct: 380 DVAQEVFNQMSSRRAPPDIRTYNVLLDGLCC 410
Score = 114 bits (285), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 75/308 (24%), Positives = 139/308 (45%), Gaps = 35/308 (11%)
Query: 375 QFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGC-------- 426
QF L +MV P+++ + RL+ + N + + +F+QMQ++G
Sbjct: 63 QFNDALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQMQILGIPPLLCTCN 122
Query: 427 ---------------------------EPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAA 459
EPD VT+ +L++ + ++ A+ ++ ++
Sbjct: 123 IVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGM 182
Query: 460 GLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSA 519
G P+ TY+ +I CL K HL A +LF +M G PN+VTYN ++ + + A
Sbjct: 183 GFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDA 242
Query: 520 LKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDL 579
L RDM EP+ +T++ +++ G L EA+ ++ M + + PD YG L++
Sbjct: 243 AWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLING 302
Query: 580 WGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPS 639
G + +A + + M + G PN +L+ F + ++ D + M G+ +
Sbjct: 303 LCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVAN 362
Query: 640 LQTYTLLL 647
TYT+L+
Sbjct: 363 TITYTVLI 370
Score = 98.6 bits (244), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 78/316 (24%), Positives = 147/316 (46%), Gaps = 20/316 (6%)
Query: 411 LNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSV 470
N+ALD+F +M P + + L+ + AK DV + ++++MQ G+ P T ++
Sbjct: 64 FNDALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQMQILGIPPLLCTCNI 123
Query: 471 IINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAG 530
+++C+ + A +M+ G P+LVT+ ++ + A+ L+ + G
Sbjct: 124 VMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMG 183
Query: 531 FEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAW 590
F+P+ VTY+ ++ L +L+ A +F +M P+ Y LV + G A
Sbjct: 184 FKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAA 243
Query: 591 EWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTY-TLLLSC 649
M++ + PNV T +L+ AF++VG+L +A L M+ + + P + TY +L+
Sbjct: 244 WLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGL 303
Query: 650 CT-----EARSPYDMGFCHELMAVSG-HPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHS 703
C EAR + LM +G +P + ++ + V D + F EM
Sbjct: 304 CMYGLLDEARQMF------YLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEM--- 354
Query: 704 EDRESKRGLVDAVVDF 719
S++G+V + +
Sbjct: 355 ----SQKGVVANTITY 366
Score = 89.0 bits (219), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/250 (26%), Positives = 113/250 (45%), Gaps = 7/250 (2%)
Query: 296 NVVESVSRILRQWKWGPLAE-EALGNTNYSMDAYQANQVLKQLQDHTVALGFFN------ 348
NV+ + I K G L E + L N M Y L + G +
Sbjct: 257 NVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMF 316
Query: 349 WLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRA 408
+L + G +E YTT++ ++++ K+ +M + G N +TY LI Y
Sbjct: 317 YLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLV 376
Query: 409 NYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTY 468
+ A +VF QM PD TY L+D G ++ A+ +++ M+ + + TY
Sbjct: 377 GRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTY 436
Query: 469 SVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQN 528
++II + K G ++ A LFC + ++G PN++TY MI+ + A L++ M+
Sbjct: 437 TIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFKKMKE 496
Query: 529 AGFEPDKVTY 538
GF P++ Y
Sbjct: 497 DGFLPNESVY 506
>sp|Q9LW84|PP236_ARATH Pentatricopeptide repeat-containing protein At3g16010
OS=Arabidopsis thaliana GN=At3g16010 PE=2 SV=1
Length = 642
Score = 160 bits (404), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 111/387 (28%), Positives = 188/387 (48%), Gaps = 8/387 (2%)
Query: 267 VSERFSKPS-REMKIPAGLAPFSRHFASTGNVVESVSRILRQWKWGPLAEEALGNTNYSM 325
+ + FS P+ E + P SR S + E RI++ +KWGP AE+AL +
Sbjct: 32 IVQMFSVPNHEESEKPQEKWKLSRKDPSVRMLDERFIRIVKIFKWGPDAEKALEVLKLKV 91
Query: 326 DAYQANQVLKQLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQ 385
D +L+ + V + FF W ++ F+HD TY T++ L AR +G + + + +
Sbjct: 92 DHRLVRSILEIDVEINVKIQFFKWAGKRRNFQHDCSTYMTLIRCLEEARLYGEMYRTIQE 151
Query: 386 MVRD---GCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAK 442
+VR+ P V++ L+ + GRA +++AL VF Q + C+P TY ++I + +
Sbjct: 152 VVRNTYVSVSPAVLS--ELVKALGRAKMVSKALSVFYQAKGRKCKPTSSTYNSVILMLMQ 209
Query: 443 AGFLDVAMDMYKKMQAAG-LSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLV 501
G + ++Y +M G PDT TYS +I+ K G +A +LF EM + P
Sbjct: 210 EGQHEKVHEVYTEMCNEGDCFPDTITYSALISSYEKLGRNDSAIRLFDEMKDNCMQPTEK 269
Query: 502 TYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEM 561
Y ++ + K + AL L+ +M+ AG P TY+ +++ LG G +DEA + +M
Sbjct: 270 IYTTLLGIYFKVGKVEKALDLFEEMKRAGCSPTVYTYTELIKGLGKAGRVDEAYGFYKDM 329
Query: 562 RRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSA-FLRVGQ 620
R PD L+++ GK G V + + M P V + N+++ A F
Sbjct: 330 LRDGLTPDVVFLNNLMNILGKVGRVEELTNVFSEMGMWRCTPTVVSYNTVIKALFESKAH 389
Query: 621 LSDAYHLLQGMLNLGLKPSLQTYTLLL 647
+S+ M + PS TY++L+
Sbjct: 390 VSEVSSWFDKMKADSVSPSEFTYSILI 416
Score = 145 bits (367), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 103/340 (30%), Positives = 169/340 (49%), Gaps = 16/340 (4%)
Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLI 402
AL F ++R AG +TYT ++ LG+A + M+RDG P+VV N L+
Sbjct: 287 ALDLFEEMKR-AGCSPTVYTYTELIKGLGKAGRVDEAYGFYKDMLRDGLTPDVVFLNNLM 345
Query: 403 HSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLID--IHAKAGFLDVAMDMYKKMQAAG 460
+ G+ + E +VF +M + C P V+Y T+I +KA +V+ + KM+A
Sbjct: 346 NILGKVGRVEELTNVFSEMGMWRCTPTVVSYNTVIKALFESKAHVSEVS-SWFDKMKADS 404
Query: 461 LSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSAL 520
+SP FTYS++I+ K ++ A L EM +G P Y +I KA+ Y++A
Sbjct: 405 VSPSEFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAAN 464
Query: 521 KLYRDM-QNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDL 579
+L++++ +N G +V Y+++++ G CG L EA +F EM+ + PD Y L+
Sbjct: 465 ELFKELKENFGNVSSRV-YAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNALMSG 523
Query: 580 WGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPS 639
KAG + +A M + G R ++ + N +L+ F R G A + + + + G+KP
Sbjct: 524 MVKAGMINEANSLLRKMEENGCRADINSHNIILNGFARTGVPRRAIEMFETIKHSGIKPD 583
Query: 640 LQTYTLLLSCCTEA----------RSPYDMGFCHELMAVS 669
TY LL C A R D GF ++ + S
Sbjct: 584 GVTYNTLLGCFAHAGMFEEAARMMREMKDKGFEYDAITYS 623
Score = 126 bits (317), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 85/329 (25%), Positives = 155/329 (47%), Gaps = 37/329 (11%)
Query: 362 TYTTMVGILGRARQFGAINKLLDQMVRDG-CQPNVVTYNRLIHSYGRANYLNEALDVFKQ 420
TY +++ +L + Q ++++ +M +G C P+ +TY+ LI SY + + A+ +F +
Sbjct: 199 TYNSVILMLMQEGQHEKVHEVYTEMCNEGDCFPDTITYSALISSYEKLGRNDSAIRLFDE 258
Query: 421 MQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGH 480
M+ +P Y TL+ I+ K G ++ A+D++++M+ AG SP +TY+ +I LGKAG
Sbjct: 259 MKDNCMQPTEKIYTTLLGIYFKVGKVEKALDLFEEMKRAGCSPTVYTYTELIKGLGKAGR 318
Query: 481 LQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSI 540
+ A+ + +M+ G P++V N ++ + K + ++ +M P V+Y+
Sbjct: 319 VDEAYGFYKDMLRDGLTPDVVFLNNLMNILGKVGRVEELTNVFSEMGMWRCTPTVVSYNT 378
Query: 541 VMEVLGHC-GYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQA 599
V++ L ++ E + F +M+ + P E Y +L+D + K V KA E M +
Sbjct: 379 VIKALFESKAHVSEVSSWFDKMKADSVSPSEFTYSILIDGYCKTNRVEKALLLLEEMDEK 438
Query: 600 GLRPNVPTCNSLLSA-----------------------------------FLRVGQLSDA 624
G P SL++A F + G+LS+A
Sbjct: 439 GFPPCPAAYCSLINALGKAKRYEAANELFKELKENFGNVSSRVYAVMIKHFGKCGKLSEA 498
Query: 625 YHLLQGMLNLGLKPSLQTYTLLLSCCTEA 653
L M N G P + Y L+S +A
Sbjct: 499 VDLFNEMKNQGSGPDVYAYNALMSGMVKA 527
Score = 108 bits (270), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 109/195 (55%)
Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
+ GF Y +++ LG+A+++ A N+L ++ + + Y +I +G+ L+
Sbjct: 437 EKGFPPCPAAYCSLINALGKAKRYEAANELFKELKENFGNVSSRVYAVMIKHFGKCGKLS 496
Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
EA+D+F +M+ G PD Y L+ KAG ++ A + +KM+ G D ++++I+
Sbjct: 497 EAVDLFNEMKNQGSGPDVYAYNALMSGMVKAGMINEANSLLRKMEENGCRADINSHNIIL 556
Query: 473 NCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFE 532
N + G + A ++F + + G P+ VTYN ++ A A ++ A ++ R+M++ GFE
Sbjct: 557 NGFARTGVPRRAIEMFETIKHSGIKPDGVTYNTLLGCFAHAGMFEEAARMMREMKDKGFE 616
Query: 533 PDKVTYSIVMEVLGH 547
D +TYS +++ +G+
Sbjct: 617 YDAITYSSILDAVGN 631
Score = 105 bits (261), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 71/263 (26%), Positives = 120/263 (45%), Gaps = 1/263 (0%)
Query: 362 TYTTMVGILGRAR-QFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQ 420
+Y T++ L ++ ++ D+M D P+ TY+ LI Y + N + +AL + ++
Sbjct: 375 SYNTVIKALFESKAHVSEVSSWFDKMKADSVSPSEFTYSILIDGYCKTNRVEKALLLLEE 434
Query: 421 MQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGH 480
M G P YC+LI+ KA + A +++K+++ + + Y+V+I GK G
Sbjct: 435 MDEKGFPPCPAAYCSLINALGKAKRYEAANELFKELKENFGNVSSRVYAVMIKHFGKCGK 494
Query: 481 LQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSI 540
L A LF EM NQG P++ YN +++ KA A L R M+ G D +++I
Sbjct: 495 LSEAVDLFNEMKNQGSGPDVYAYNALMSGMVKAGMINEANSLLRKMEENGCRADINSHNI 554
Query: 541 VMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAG 600
++ G A +F ++ PD Y L+ + AG +A M G
Sbjct: 555 ILNGFARTGVPRRAIEMFETIKHSGIKPDGVTYNTLLGCFAHAGMFEEAARMMREMKDKG 614
Query: 601 LRPNVPTCNSLLSAFLRVGQLSD 623
+ T +S+L A V D
Sbjct: 615 FEYDAITYSSILDAVGNVDHEKD 637
Score = 77.8 bits (190), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 74/138 (53%), Gaps = 1/138 (0%)
Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLI 402
A+ FN ++ Q G D + Y ++ + +A N LL +M +GC+ ++ ++N ++
Sbjct: 498 AVDLFNEMKNQ-GSGPDVYAYNALMSGMVKAGMINEANSLLRKMEENGCRADINSHNIIL 556
Query: 403 HSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLS 462
+ + R A+++F+ ++ G +PD VTY TL+ A AG + A M ++M+ G
Sbjct: 557 NGFARTGVPRRAIEMFETIKHSGIKPDGVTYNTLLGCFAHAGMFEEAARMMREMKDKGFE 616
Query: 463 PDTFTYSVIINCLGKAGH 480
D TYS I++ +G H
Sbjct: 617 YDAITYSSILDAVGNVDH 634
Score = 34.7 bits (78), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 15/67 (22%), Positives = 34/67 (50%)
Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
+ +G K D TY T++G A F +++ +M G + + +TY+ ++ + G ++
Sbjct: 576 KHSGIKPDGVTYNTLLGCFAHAGMFEEAARMMREMKDKGFEYDAITYSSILDAVGNVDHE 635
Query: 412 NEALDVF 418
+ + F
Sbjct: 636 KDDVSSF 642
>sp|P0C894|PP143_ARATH Putative pentatricopeptide repeat-containing protein At2g02150
OS=Arabidopsis thaliana GN=At2g02150 PE=3 SV=1
Length = 761
Score = 158 bits (400), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 104/333 (31%), Positives = 162/333 (48%), Gaps = 16/333 (4%)
Query: 332 QVLKQL-QDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMV--- 387
+VL +L +D +A FF W + GFKH +Y + IL AR + N +L +MV
Sbjct: 113 RVLVELKEDPKLAFKFFKWSMTRNGFKHSVESYCIVAHILFCARMYYDANSVLKEMVLSK 172
Query: 388 ------------RDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCT 435
R+ C P ++ L L EA+ F +M+ P +
Sbjct: 173 ADCDVFDVLWSTRNVCVPGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNG 232
Query: 436 LIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQG 495
L+ AK G D +K M AG P FTY+++I+C+ K G ++AA LF EM +G
Sbjct: 233 LLHRFAKLGKTDDVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRG 292
Query: 496 CIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAE 555
+P+ VTYN MI K + + +M++ EPD +TY+ ++ G L
Sbjct: 293 LVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGL 352
Query: 556 AVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAF 615
+ EM+ P+ Y LVD + K G +++A ++Y M + GL PN T SL+ A
Sbjct: 353 EFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDAN 412
Query: 616 LRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
++G LSDA+ L ML +G++ ++ TYT L+
Sbjct: 413 CKIGNLSDAFRLGNEMLQVGVEWNVVTYTALID 445
Score = 152 bits (384), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 97/392 (24%), Positives = 185/392 (47%), Gaps = 1/392 (0%)
Query: 354 AGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNE 413
AG + TY M+ + + A L ++M G P+ VTYN +I +G+ L++
Sbjct: 256 AGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDD 315
Query: 414 ALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIIN 473
+ F++M+ + CEPD +TY LI+ K G L + ++ Y++M+ GL P+ +YS +++
Sbjct: 316 TVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVD 375
Query: 474 CLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEP 533
K G +Q A + + +M G +PN TY +I K N A +L +M G E
Sbjct: 376 AFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEW 435
Query: 534 DKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWY 593
+ VTY+ +++ L + EAE +F +M +P+ Y L+ + KA N+ +A E
Sbjct: 436 NVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELL 495
Query: 594 EAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEA 653
+ G++P++ + + + ++ A ++ M G+K + YT L+ ++
Sbjct: 496 NELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKS 555
Query: 654 RSPYD-MGFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRESKRGL 712
+P + + E+ + + + + V V F + + ++ +
Sbjct: 556 GNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAI 615
Query: 713 VDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPD 744
A++D L K E A +++E QK + PD
Sbjct: 616 FTAMIDGLCKDNQVEAATTLFEQMVQKGLVPD 647
Score = 138 bits (348), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 85/288 (29%), Positives = 143/288 (49%), Gaps = 4/288 (1%)
Query: 368 GILGRARQFGA---INKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVV 424
G+L R + G + + M+ G +P V TYN +I + + A +F++M+
Sbjct: 232 GLLHRFAKLGKTDDVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFR 291
Query: 425 GCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAA 484
G PD VTY ++ID K G LD + +++M+ PD TY+ +INC K G L
Sbjct: 292 GLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIG 351
Query: 485 HQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEV 544
+ + EM G PN+V+Y+ ++ K Q A+K Y DM+ G P++ TY+ +++
Sbjct: 352 LEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDA 411
Query: 545 LGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPN 604
G L +A + EM + + Y L+D A +++A E + M AG+ PN
Sbjct: 412 NCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPN 471
Query: 605 VPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTY-TLLLSCCT 651
+ + N+L+ F++ + A LL + G+KP L Y T + C+
Sbjct: 472 LASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCS 519
Score = 110 bits (274), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 90/360 (25%), Positives = 163/360 (45%), Gaps = 13/360 (3%)
Query: 325 MDAYQANQVLKQLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLD 384
+DA+ +++Q A+ F+ +RR G +E+TYT+++ + +L +
Sbjct: 374 VDAFCKEGMMQQ------AIKFYVDMRR-VGLVPNEYTYTSLIDANCKIGNLSDAFRLGN 426
Query: 385 QMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAG 444
+M++ G + NVVTY LI A + EA ++F +M G P+ +Y LI KA
Sbjct: 427 EMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAK 486
Query: 445 FLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYN 504
+D A+++ +++ G+ PD Y I L ++AA + EM G N + Y
Sbjct: 487 NMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYT 546
Query: 505 IMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRK 564
++ K+ N L L +M+ E VT+ ++++ L + +A F +
Sbjct: 547 TLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISND 606
Query: 565 NWV-PDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSD 623
+ + ++ ++D K V A +E M+Q GL P+ SL+ + G + +
Sbjct: 607 FGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLE 666
Query: 624 AYHLLQGMLNLGLKPSLQTYTLL---LSCCTEARSPYDMGFCHELMAVSGHPAHMFLLSM 680
A L M +G+K L YT L LS C + + F E++ HP + +S+
Sbjct: 667 ALALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKA--RSFLEEMIGEGIHPDEVLCISV 724
Score = 59.3 bits (142), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 92/204 (45%), Gaps = 1/204 (0%)
Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
++ G K + YTT++ ++ LLD+M + VVT+ LI + +
Sbjct: 534 KECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLV 593
Query: 412 NEALDVFKQM-QVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSV 470
++A+D F ++ G + + + +ID K ++ A ++++M GL PD Y+
Sbjct: 594 SKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTS 653
Query: 471 IINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAG 530
+++ K G++ A L +M G +L+ Y ++ + Q A +M G
Sbjct: 654 LMDGNFKQGNVLEALALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEG 713
Query: 531 FEPDKVTYSIVMEVLGHCGYLDEA 554
PD+V V++ G +DEA
Sbjct: 714 IHPDEVLCISVLKKHYELGCIDEA 737
Score = 52.4 bits (124), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 75/167 (44%), Gaps = 10/167 (5%)
Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLI 402
A+ +FN + G + + +T M+ L + Q A L +QMV+ G P+ Y L+
Sbjct: 596 AVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLM 655
Query: 403 HSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLS 462
+ + EAL + +M +G + D + Y +L+ + L A ++M G+
Sbjct: 656 DGNFKQGNVLEALALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIH 715
Query: 463 PD-TFTYSVI-----INCLGKAGHLQA---AHQLFCEMVNQGCIPNL 500
PD SV+ + C+ +A LQ+ HQL N +PN+
Sbjct: 716 PDEVLCISVLKKHYELGCIDEAVELQSYLMKHQLLTS-DNDNALPNM 761
>sp|Q9M907|PP217_ARATH Pentatricopeptide repeat-containing protein At3g06920
OS=Arabidopsis thaliana GN=At3g06920 PE=2 SV=1
Length = 871
Score = 158 bits (400), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 108/391 (27%), Positives = 179/391 (45%), Gaps = 47/391 (12%)
Query: 301 VSRILRQWKWGPLAEEALGNTNYSMDAYQANQVLKQLQDHTVALGFFNWLRRQAGFKHDE 360
V +++R++K+ P A + A+ A + + L F ++ + G++
Sbjct: 155 VVQMMRKFKFRP----AFSAYTTLIGAFSA------VNHSDMMLTLFQQMQ-ELGYEPTV 203
Query: 361 HTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQ 420
H +TT++ + + + LLD+M ++V YN I S+G+ ++ A F +
Sbjct: 204 HLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHE 263
Query: 421 MQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQ----------------------- 457
++ G +PD VTY ++I + KA LD A++M++ ++
Sbjct: 264 IEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGK 323
Query: 458 ------------AAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNI 505
A G P Y+ I+ CL K G + A ++F EM + PNL TYNI
Sbjct: 324 FDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEM-KKDAAPNLSTYNI 382
Query: 506 MIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKN 565
+I + +A +A +L MQ AG P+ T +I+++ L LDEA A+F EM K
Sbjct: 383 LIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKV 442
Query: 566 WVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAY 625
PDE + L+D GK G V A++ YE ML + R N SL+ F G+ D +
Sbjct: 443 CTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGH 502
Query: 626 HLLQGMLNLGLKPSLQTYTLLLSCCTEARSP 656
+ + M+N P LQ + C +A P
Sbjct: 503 KIYKDMINQNCSPDLQLLNTYMDCMFKAGEP 533
Score = 158 bits (399), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 94/357 (26%), Positives = 167/357 (46%), Gaps = 1/357 (0%)
Query: 291 FASTGNVVESVSRILRQWKWGPLAEEALGNTNYSMDAYQANQVLKQLQDHTVALGFFNWL 350
F V + +L WGP AE L ++ VL++L+D A+ +F W
Sbjct: 29 FEGNRQTVNDICNVLETGPWGPSAENTLSALSFKPQPEFVIGVLRRLKDVNRAIEYFRWY 88
Query: 351 RRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANY 410
R+ H +Y +++ ++ R R F A++++L +M G P+V T ++ +AN
Sbjct: 89 ERRTELPHCPESYNSLLLVMARCRNFDALDQILGEMSVAGFGPSVNTCIEMVLGCVKANK 148
Query: 411 LNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSV 470
L E DV + M+ P Y TLI + D+ + ++++MQ G P ++
Sbjct: 149 LREGYDVVQMMRKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTT 208
Query: 471 IINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAG 530
+I K G + +A L EM + ++V YN+ I K A K + +++ G
Sbjct: 209 LIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANG 268
Query: 531 FEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAW 590
+PD+VTY+ ++ VL LDEA +F + + VP Y ++ +G AG +A+
Sbjct: 269 LKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAY 328
Query: 591 EWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
E G P+V N +L+ ++G++ +A + + M P+L TY +L+
Sbjct: 329 SLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEM-KKDAAPNLSTYNILI 384
Score = 157 bits (398), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 91/296 (30%), Positives = 152/296 (51%)
Query: 359 DEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVF 418
DE T+ +++ LG+ + K+ ++M+ C+ N + Y LI ++ + ++
Sbjct: 446 DEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIY 505
Query: 419 KQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKA 478
K M C PD T +D KAG + M+++++A PD +YS++I+ L KA
Sbjct: 506 KDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKA 565
Query: 479 GHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTY 538
G ++LF M QGC+ + YNI+I K A +L +M+ GFEP VTY
Sbjct: 566 GFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTY 625
Query: 539 SIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQ 598
V++ L LDEA +F E + K + +Y L+D +GK G + +A+ E ++Q
Sbjct: 626 GSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQ 685
Query: 599 AGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEAR 654
GL PN+ T NSLL A ++ ++++A Q M L P+ TY +L++ + R
Sbjct: 686 KGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVR 741
Score = 155 bits (391), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 110/436 (25%), Positives = 193/436 (44%), Gaps = 49/436 (11%)
Query: 269 ERFSKPSREMKIPAGLA--PFSRHFASTGNVVESVSRILRQWKWGPLAEEALGNTNYSMD 326
E F + ++P A + S G E+ S + RQ G + S+
Sbjct: 294 EMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIP---------SVI 344
Query: 327 AYQAN-QVLKQLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQ 385
AY L+++ AL F +++ A + TY ++ +L RA + +L D
Sbjct: 345 AYNCILTCLRKMGKVDEALKVFEEMKKDAA--PNLSTYNILIDMLCRAGKLDTAFELRDS 402
Query: 386 MVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGF 445
M + G PNV T N ++ ++ L+EA +F++M C PD +T+C+LID K G
Sbjct: 403 MQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGR 462
Query: 446 LDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNI 505
+D A +Y+KM + ++ Y+ +I G + H+++ +M+NQ C P+L N
Sbjct: 463 VDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNT 522
Query: 506 MIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKN 565
+ KA + ++ +++ F PD +YSI++ L G+ +E +F M+ +
Sbjct: 523 YMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQG 582
Query: 566 WVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRP---------------------- 603
V D Y +++D + K G V KA++ E M G P
Sbjct: 583 CVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAY 642
Query: 604 -------------NVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCC 650
NV +SL+ F +VG++ +AY +L+ ++ GL P+L T+ LL
Sbjct: 643 MLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDAL 702
Query: 651 TEARSPYDMGFCHELM 666
+A + C + M
Sbjct: 703 VKAEEINEALVCFQSM 718
Score = 123 bits (309), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 71/264 (26%), Positives = 126/264 (47%)
Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
++ G D Y ++ + + +LL++M G +P VVTY +I + + L
Sbjct: 579 KEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRL 638
Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
+EA +F++ + E + V Y +LID K G +D A + +++ GL+P+ +T++ +
Sbjct: 639 DEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSL 698
Query: 472 INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF 531
++ L KA + A F M C PN VTY I+I K R + A +++MQ G
Sbjct: 699 LDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGM 758
Query: 532 EPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWE 591
+P ++Y+ ++ L G + EA A+F + VPD Y +++ A+
Sbjct: 759 KPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEGLSNGNRAMDAFS 818
Query: 592 WYEAMLQAGLRPNVPTCNSLLSAF 615
+E + GL + TC LL
Sbjct: 819 LFEETRRRGLPIHNKTCVVLLDTL 842
Score = 116 bits (290), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 74/292 (25%), Positives = 139/292 (47%)
Query: 356 FKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEAL 415
F D +Y+ ++ L +A +L M GC + YN +I + + +N+A
Sbjct: 548 FVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAY 607
Query: 416 DVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCL 475
+ ++M+ G EP VTY ++ID AK LD A ++++ ++ + + YS +I+
Sbjct: 608 QLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGF 667
Query: 476 GKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDK 535
GK G + A+ + E++ +G PNL T+N ++ KA AL ++ M+ P++
Sbjct: 668 GKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQ 727
Query: 536 VTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEA 595
VTY I++ L ++A + EM+++ P Y ++ KAGN+ +A ++
Sbjct: 728 VTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDR 787
Query: 596 MLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
G P+ N+++ + DA+ L + GL +T +LL
Sbjct: 788 FKANGGVPDSACYNAMIEGLSNGNRAMDAFSLFEETRRRGLPIHNKTCVVLL 839
Score = 97.8 bits (242), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 103/200 (51%)
Query: 363 YTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQ 422
Y++++ G+ + +L+++++ G PN+ T+N L+ + +A +NEAL F+ M+
Sbjct: 660 YSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMK 719
Query: 423 VVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQ 482
+ C P++VTY LI+ K + A +++MQ G+ P T +Y+ +I+ L KAG++
Sbjct: 720 ELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIA 779
Query: 483 AAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVM 542
A LF G +P+ YN MI + A L+ + + G T +++
Sbjct: 780 EAGALFDRFKANGGVPDSACYNAMIEGLSNGNRAMDAFSLFEETRRRGLPIHNKTCVVLL 839
Query: 543 EVLGHCGYLDEAEAVFAEMR 562
+ L L++A V A +R
Sbjct: 840 DTLHKNDCLEQAAIVGAVLR 859
Score = 39.3 bits (90), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 29/116 (25%), Positives = 50/116 (43%), Gaps = 1/116 (0%)
Query: 334 LKQLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQP 393
L +++ A F+ +++Q G K +YTTM+ L +A L D+ +G P
Sbjct: 737 LCKVRKFNKAFVFWQEMQKQ-GMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVP 795
Query: 394 NVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVA 449
+ YN +I N +A +F++ + G T L+D K L+ A
Sbjct: 796 DSACYNAMIEGLSNGNRAMDAFSLFEETRRRGLPIHNKTCVVLLDTLHKNDCLEQA 851
>sp|Q9SXD8|PPR90_ARATH Pentatricopeptide repeat-containing protein At1g62590
OS=Arabidopsis thaliana GN=At1g62590 PE=2 SV=1
Length = 634
Score = 158 bits (400), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 92/297 (30%), Positives = 156/297 (52%), Gaps = 4/297 (1%)
Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
+ G++ D T+TT++ L + L+D+MV+ GCQPN+VTY +++ + +
Sbjct: 183 EMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTD 242
Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
AL++ +M+ E D V + T+ID K +D A++++K+M+ G+ P+ TYS +I
Sbjct: 243 LALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLI 302
Query: 473 NCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFE 532
+CL G A QL +M+ + PNLVT+N +I K + A KLY DM +
Sbjct: 303 SCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSID 362
Query: 533 PDKVTYSIVMEVLGHCGY--LDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAW 590
PD TY+ ++ G C + LD+A+ +F M K+ PD Y L+ + K+ V
Sbjct: 363 PDIFTYNSLVN--GFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGT 420
Query: 591 EWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
E + M GL + T +L+ G +A + + M++ G+ P + TY++LL
Sbjct: 421 ELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILL 477
Score = 148 bits (373), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 99/350 (28%), Positives = 165/350 (47%), Gaps = 21/350 (6%)
Query: 339 DHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTY 398
D +AL N + A + D + T++ L + R L +M G +PNVVTY
Sbjct: 240 DTDLALNLLNKME-AAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTY 298
Query: 399 NRLIH---SYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKK 455
+ LI SYGR ++A + M P+ VT+ LID K G A +Y
Sbjct: 299 SSLISCLCSYGR---WSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDD 355
Query: 456 MQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARN 515
M + PD FTY+ ++N L A Q+F MV++ C P++VTYN +I K++
Sbjct: 356 MIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKR 415
Query: 516 YQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGL 575
+ +L+R+M + G D VTY+ +++ L H G D A+ VF +M PD Y +
Sbjct: 416 VEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSI 475
Query: 576 LVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLG 635
L+D G + KA E ++ M ++ ++ ++ +++ + G++ D + L + G
Sbjct: 476 LLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKG 535
Query: 636 LKPSLQTYTLLLSCCTEARSPYDMGFCHELMAVSGHPAHMFLLSMPSPGP 685
+KP++ TY ++S G C + + A+ L M GP
Sbjct: 536 VKPNVVTYNTMIS-----------GLCSKRLL---QEAYALLKKMKEDGP 571
Score = 140 bits (352), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 100/393 (25%), Positives = 185/393 (47%), Gaps = 12/393 (3%)
Query: 382 LLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHA 441
L+DQMV G +P+ +T+ LIH N +EA+ + +M GC+P+ VTY +++
Sbjct: 177 LVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLC 236
Query: 442 KAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLV 501
K G D+A+++ KM+AA + D ++ II+ L K H+ A LF EM +G PN+V
Sbjct: 237 KRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVV 296
Query: 502 TYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEM 561
TY+ +I+ + A +L DM P+ VT++ +++ G EAE ++ +M
Sbjct: 297 TYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDM 356
Query: 562 RRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQL 621
+++ PD Y LV+ + + KA + +E M+ P+V T N+L+ F + ++
Sbjct: 357 IKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRV 416
Query: 622 SDAYHLLQGMLNLGLKPSLQTYTLLLSC------CTEARSPYDMGFCHELMAVSGHPAHM 675
D L + M + GL TYT L+ C A+ + + M G P +
Sbjct: 417 EDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVF------KQMVSDGVPPDI 470
Query: 676 FLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRESKRGLVDAVVDFLHKSGLKEEAGSVWEV 735
S+ G + + M + + + +++ + K+G ++ ++
Sbjct: 471 MTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCS 530
Query: 736 AAQKNVYPDAVKEKGMSYWLINLHVMSDGTAVI 768
+ K V P+ V M L + ++ + A++
Sbjct: 531 LSLKGVKPNVVTYNTMISGLCSKRLLQEAYALL 563
Score = 138 bits (347), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 87/305 (28%), Positives = 157/305 (51%), Gaps = 1/305 (0%)
Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLI 402
AL F + + G + + TY++++ L ++ ++LL M+ PN+VT+N LI
Sbjct: 279 ALNLFKEMETK-GIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALI 337
Query: 403 HSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLS 462
++ + EA ++ M +PD TY +L++ LD A M++ M +
Sbjct: 338 DAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCF 397
Query: 463 PDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKL 522
PD TY+ +I K+ ++ +LF EM ++G + + VTY +I + +A K+
Sbjct: 398 PDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKV 457
Query: 523 YRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGK 582
++ M + G PD +TYSI+++ L + G L++A VF M++ D +Y +++ K
Sbjct: 458 FKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCK 517
Query: 583 AGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQT 642
AG V W+ + ++ G++PNV T N+++S L +AY LL+ M G P+ T
Sbjct: 518 AGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGT 577
Query: 643 YTLLL 647
Y L+
Sbjct: 578 YNTLI 582
Score = 133 bits (334), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 85/301 (28%), Positives = 150/301 (49%), Gaps = 7/301 (2%)
Query: 358 HDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDV 417
H +TY ++ R Q LL +M++ G +P++VT + L++ Y +++A+ +
Sbjct: 118 HGLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVAL 177
Query: 418 FKQMQVVGCEPDRVTYCTLID---IHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
QM +G PD +T+ TLI +H KA A+ + +M G P+ TY V++N
Sbjct: 178 VDQMVEMGYRPDTITFTTLIHGLFLHNKAS---EAVALVDRMVQRGCQPNLVTYGVVVNG 234
Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPD 534
L K G A L +M ++V +N +I K R+ AL L+++M+ G P+
Sbjct: 235 LCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPN 294
Query: 535 KVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYE 594
VTYS ++ L G +A + ++M K P+ + L+D + K G +A + Y+
Sbjct: 295 VVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYD 354
Query: 595 AMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTY-TLLLSCCTEA 653
M++ + P++ T NSL++ F +L A + + M++ P + TY TL+ C
Sbjct: 355 DMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSK 414
Query: 654 R 654
R
Sbjct: 415 R 415
Score = 126 bits (317), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 102/396 (25%), Positives = 175/396 (44%), Gaps = 24/396 (6%)
Query: 363 YTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQ 422
+ ++ + + ++F + L ++M R + TYN LI+ + R + ++ AL + +M
Sbjct: 88 FNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILINCFCRRSQISLALALLGKMM 147
Query: 423 VVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQ 482
+G EP VT +L++ + + A+ + +M G PDT T++ +I+ L
Sbjct: 148 KLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKAS 207
Query: 483 AAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVM 542
A L MV +GC PNLVTY +++ K + AL L M+ A E D V ++ ++
Sbjct: 208 EAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTII 267
Query: 543 EVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLR 602
+ L ++D+A +F EM K P+ Y L+ G A + M++ +
Sbjct: 268 DSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKIN 327
Query: 603 PNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGFC 662
PN+ T N+L+ AF++ G+ +A L M+ + P + TY L++ GFC
Sbjct: 328 PNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVN-----------GFC 376
Query: 663 HELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSED-----RE-SKRGLVDAV 716
F++S PD + F + ED RE S RGLV
Sbjct: 377 MHDRLDKAKQMFEFMVS-KDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDT 435
Query: 717 VDF------LHKSGLKEEAGSVWEVAAQKNVYPDAV 746
V + L G + A V++ V PD +
Sbjct: 436 VTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIM 471
Score = 119 bits (298), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 71/270 (26%), Positives = 137/270 (50%)
Query: 362 TYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQM 421
T+ ++ + +F KL D M++ P++ TYN L++ + + L++A +F+ M
Sbjct: 332 TFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFM 391
Query: 422 QVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHL 481
C PD VTY TLI K+ ++ +++++M GL DT TY+ +I L G
Sbjct: 392 VSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDC 451
Query: 482 QAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIV 541
A ++F +MV+ G P+++TY+I++ + AL+++ MQ + + D Y+ +
Sbjct: 452 DNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTM 511
Query: 542 MEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGL 601
+E + G +D+ +F + K P+ Y ++ +++A+ + M + G
Sbjct: 512 IEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGP 571
Query: 602 RPNVPTCNSLLSAFLRVGQLSDAYHLLQGM 631
PN T N+L+ A LR G + + L++ M
Sbjct: 572 LPNSGTYNTLIRAHLRDGDKAASAELIREM 601
Score = 99.8 bits (247), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 65/221 (29%), Positives = 105/221 (47%)
Query: 359 DEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVF 418
D TY T++ ++++ +L +M G + VTY LI + A VF
Sbjct: 399 DVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVF 458
Query: 419 KQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKA 478
KQM G PD +TY L+D G L+ A++++ MQ + + D + Y+ +I + KA
Sbjct: 459 KQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKA 518
Query: 479 GHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTY 538
G + LFC + +G PN+VTYN MI+ R Q A L + M+ G P+ TY
Sbjct: 519 GKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTY 578
Query: 539 SIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDL 579
+ ++ G + + EMR +V D GL+ ++
Sbjct: 579 NTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLVANM 619
Score = 95.1 bits (235), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/200 (31%), Positives = 101/200 (50%), Gaps = 1/200 (0%)
Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
G D TYTT++ L K+ QMV DG P+++TY+ L+ L +A
Sbjct: 430 GLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKA 489
Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
L+VF MQ + D Y T+I+ KAG +D D++ + G+ P+ TY+ +I+
Sbjct: 490 LEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISG 549
Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPD 534
L LQ A+ L +M G +PN TYN +I + + ++ +L R+M++ F D
Sbjct: 550 LCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGD 609
Query: 535 KVTYSIVMEVLGHCGYLDEA 554
T +V +L H G LD++
Sbjct: 610 ASTIGLVANML-HDGRLDKS 628
Score = 94.7 bits (234), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 62/245 (25%), Positives = 118/245 (48%), Gaps = 1/245 (0%)
Query: 411 LNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSV 470
L++A+ +F M P V + L+ AK DV + + +KMQ + +TY++
Sbjct: 66 LDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNI 125
Query: 471 IINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAG 530
+INC + + A L +M+ G P++VT + ++ + A+ L M G
Sbjct: 126 LINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMG 185
Query: 531 FEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAW 590
+ PD +T++ ++ L EA A+ M ++ P+ YG++V+ K G+ A
Sbjct: 186 YRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLAL 245
Query: 591 EWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSC- 649
M A + +V N+++ + + + DA +L + M G++P++ TY+ L+SC
Sbjct: 246 NLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCL 305
Query: 650 CTEAR 654
C+ R
Sbjct: 306 CSYGR 310
>sp|Q9LYT2|PP287_ARATH Pentatricopeptide repeat-containing protein At3g59040
OS=Arabidopsis thaliana GN=At3g59040 PE=2 SV=2
Length = 583
Score = 158 bits (399), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 91/349 (26%), Positives = 174/349 (49%), Gaps = 6/349 (1%)
Query: 334 LKQLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQP 393
KQL+ + WLR Q + E + ++ G+ F ++L + + G P
Sbjct: 113 FKQLKKWNLVSEILEWLRYQNWWNFSEIDFLMLITAYGKLGNFNGAERVLSVLSKMGSTP 172
Query: 394 NVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMY 453
NV++Y L+ SYGR N A +F++MQ G EP +TY ++ + A +++
Sbjct: 173 NVISYTALMESYGRGGKCNNAEAIFRRMQSSGPEPSAITYQIILKTFVEGDKFKEAEEVF 232
Query: 454 KKM---QAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQ 510
+ + + + L PD Y ++I KAG+ + A ++F MV +G + VTYN +++ +
Sbjct: 233 ETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTVTYNSLMSFE 292
Query: 511 AKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDE 570
+Y+ K+Y MQ + +PD V+Y+++++ G +EA +VF EM P
Sbjct: 293 T---SYKEVSKIYDQMQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTH 349
Query: 571 PVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQG 630
Y +L+D + +G V +A +++M + + P++ + ++LSA++ + A +
Sbjct: 350 KAYNILLDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKR 409
Query: 631 MLNLGLKPSLQTYTLLLSCCTEARSPYDMGFCHELMAVSGHPAHMFLLS 679
+ G +P++ TY L+ +A M +E M +SG A+ +L+
Sbjct: 410 IKVDGFEPNIVTYGTLIKGYAKANDVEKMMEVYEKMRLSGIKANQTILT 458
Score = 120 bits (300), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 68/256 (26%), Positives = 127/256 (49%), Gaps = 13/256 (5%)
Query: 349 WLRRQAG-FKHDEHTYTTMVG------------ILGRARQFGAINKLLDQMVRDGCQPNV 395
++ ++AG ++ +++MVG ++ + ++K+ DQM R QP+V
Sbjct: 255 YMYKKAGNYEKARKVFSSMVGKGVPQSTVTYNSLMSFETSYKEVSKIYDQMQRSDIQPDV 314
Query: 396 VTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKK 455
V+Y LI +YGRA EAL VF++M G P Y L+D A +G ++ A ++K
Sbjct: 315 VSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKS 374
Query: 456 MQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARN 515
M+ + PD ++Y+ +++ A ++ A + F + G PN+VTY +I AKA +
Sbjct: 375 MRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYAKAND 434
Query: 516 YQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGL 575
+ +++Y M+ +G + ++ + +M+ G C A + EM PD+ +
Sbjct: 435 VEKMMEVYEKMRLSGIKANQTILTTIMDASGRCKNFGSALGWYKEMESCGVPPDQKAKNV 494
Query: 576 LVDLWGKAGNVRKAWE 591
L+ L + +A E
Sbjct: 495 LLSLASTQDELEEAKE 510
Score = 114 bits (285), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 69/276 (25%), Positives = 133/276 (48%), Gaps = 3/276 (1%)
Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
+++ K D+ Y M+ + +A + K+ MV G + VTYN L+ +Y
Sbjct: 239 KKSPLKPDQKMYHMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTVTYNSLMSF--ETSY- 295
Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
E ++ QMQ +PD V+Y LI + +A + A+ ++++M AG+ P Y+++
Sbjct: 296 KEVSKIYDQMQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNIL 355
Query: 472 INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF 531
++ +G ++ A +F M P+L +Y M++ A + + A K ++ ++ GF
Sbjct: 356 LDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGF 415
Query: 532 EPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWE 591
EP+ VTY +++ +++ V+ +MR ++ + ++D G+ N A
Sbjct: 416 EPNIVTYGTLIKGYAKANDVEKMMEVYEKMRLSGIKANQTILTTIMDASGRCKNFGSALG 475
Query: 592 WYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHL 627
WY+ M G+ P+ N LLS +L +A L
Sbjct: 476 WYKEMESCGVPPDQKAKNVLLSLASTQDELEEAKEL 511
Score = 89.7 bits (221), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 63/280 (22%), Positives = 127/280 (45%), Gaps = 41/280 (14%)
Query: 468 YSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQ 527
+ ++I GK G+ A ++ + G PN+++Y ++ + +A ++R MQ
Sbjct: 142 FLMLITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRRMQ 201
Query: 528 NAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEM---RRKNWVPDEPVYGLLVDLWGKAG 584
++G EP +TY I+++ EAE VF + ++ PD+ +Y +++ ++ KAG
Sbjct: 202 SSGPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAG 261
Query: 585 NVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYT 644
N KA + + +M+ G+ + T NSL+S ++S Y +Q ++P + +Y
Sbjct: 262 NYEKARKVFSSMVGKGVPQSTVTYNSLMSFETSYKEVSKIYDQMQ---RSDIQPDVVSYA 318
Query: 645 LLLSCCTEARSPYDMGFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSE 704
LL+ AR E ++V F EM+ +
Sbjct: 319 LLIKAYGRARRE------EEALSV----------------------------FEEMLDAG 344
Query: 705 DRESKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPD 744
R + + + ++D SG+ E+A +V++ + ++PD
Sbjct: 345 VRPTHKAY-NILLDAFAISGMVEQAKTVFKSMRRDRIFPD 383
>sp|Q6NQ83|PP247_ARATH Pentatricopeptide repeat-containing protein At3g22470,
mitochondrial OS=Arabidopsis thaliana GN=At3g22470 PE=2
SV=1
Length = 619
Score = 158 bits (399), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 93/305 (30%), Positives = 161/305 (52%), Gaps = 1/305 (0%)
Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLI 402
AL FN + + G K D TY++++G L ++ K+L +M+ P+VVT++ LI
Sbjct: 264 ALSLFNEMEMK-GIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALI 322
Query: 403 HSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLS 462
+ + L EA +++ +M G PD +TY +LID K L A M+ M + G
Sbjct: 323 DVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCE 382
Query: 463 PDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKL 522
PD TYS++IN KA + +LF E+ ++G IPN +TYN ++ ++ +A +L
Sbjct: 383 PDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKEL 442
Query: 523 YRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGK 582
+++M + G P VTY I+++ L G L++A +F +M++ +Y +++
Sbjct: 443 FQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCN 502
Query: 583 AGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQT 642
A V AW + ++ G++P+V T N ++ + G LS+A L + M G P T
Sbjct: 503 ASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFT 562
Query: 643 YTLLL 647
Y +L+
Sbjct: 563 YNILI 567
Score = 153 bits (386), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 105/374 (28%), Positives = 183/374 (48%), Gaps = 21/374 (5%)
Query: 295 GNVVESVSRILRQWKWGPLAEEALGNTNYSMDAYQANQVLKQL---QDHTVALGFFNWLR 351
G V E++ I R ++G + D VL +L + +AL F +
Sbjct: 189 GRVSEALVLIDRMVEYG-----------FQPDEVTYGPVLNRLCKSGNSALALDLFRKME 237
Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
+ K Y+ ++ L + F L ++M G + +VVTY+ LI
Sbjct: 238 ER-NIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKW 296
Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
++ + ++M PD VT+ LID+ K G L A ++Y +M G++PDT TY+ +
Sbjct: 297 DDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSL 356
Query: 472 INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF 531
I+ K L A+Q+F MV++GC P++VTY+I+I KA+ ++L+R++ + G
Sbjct: 357 IDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGL 416
Query: 532 EPDKVTYSIVMEVLGHC--GYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKA 589
P+ +TY+ + VLG C G L+ A+ +F EM + P YG+L+D G + KA
Sbjct: 417 IPNTITYNTL--VLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKA 474
Query: 590 WEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS- 648
E +E M ++ + + N ++ ++ DA+ L + + G+KP + TY +++
Sbjct: 475 LEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGG 534
Query: 649 -CCTEARSPYDMGF 661
C + S DM F
Sbjct: 535 LCKKGSLSEADMLF 548
Score = 145 bits (366), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 89/321 (27%), Positives = 166/321 (51%), Gaps = 1/321 (0%)
Query: 338 QDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVT 397
+ + + LGF + G +HD +T T M+ R ++ +L + + G +P+ +T
Sbjct: 84 KQYDLVLGFCKGMELN-GIEHDMYTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTIT 142
Query: 398 YNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQ 457
++ L++ + ++EA+ + +M + PD VT TLI+ G + A+ + +M
Sbjct: 143 FSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMV 202
Query: 458 AAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQ 517
G PD TY ++N L K+G+ A LF +M + ++V Y+I+I K ++
Sbjct: 203 EYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFD 262
Query: 518 SALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLV 577
AL L+ +M+ G + D VTYS ++ L + G D+ + EM +N +PD + L+
Sbjct: 263 DALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALI 322
Query: 578 DLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLK 637
D++ K G + +A E Y M+ G+ P+ T NSL+ F + L +A + M++ G +
Sbjct: 323 DVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCE 382
Query: 638 PSLQTYTLLLSCCTEARSPYD 658
P + TY++L++ +A+ D
Sbjct: 383 PDIVTYSILINSYCKAKRVDD 403
Score = 141 bits (355), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 82/296 (27%), Positives = 153/296 (51%)
Query: 359 DEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVF 418
D T++ ++ + + + +L ++M+ G P+ +TYN LI + + N L+EA +F
Sbjct: 314 DVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMF 373
Query: 419 KQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKA 478
M GCEPD VTY LI+ + KA +D M +++++ + GL P+T TY+ ++ ++
Sbjct: 374 DLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQS 433
Query: 479 GHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTY 538
G L AA +LF EMV++G P++VTY I++ AL+++ MQ + Y
Sbjct: 434 GKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIY 493
Query: 539 SIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQ 598
+I++ + + +D+A ++F + K PD Y +++ K G++ +A + M +
Sbjct: 494 NIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKE 553
Query: 599 AGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEAR 654
G P+ T N L+ A L L + L++ M G T +++ ++ R
Sbjct: 554 DGCTPDDFTYNILIRAHLGGSGLISSVELIEEMKVCGFSADSSTIKMVIDMLSDRR 609
Score = 138 bits (348), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 104/404 (25%), Positives = 195/404 (48%), Gaps = 6/404 (1%)
Query: 347 FNWLRR--QAGFKHDEHTYTTMV-GILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIH 403
F+ L R + G++ D T++T+V G R A+ L+D+MV +P++VT + LI+
Sbjct: 125 FSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAV-ALVDRMVEMKQRPDLVTVSTLIN 183
Query: 404 SYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSP 463
++EAL + +M G +PD VTY +++ K+G +A+D+++KM+ +
Sbjct: 184 GLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKA 243
Query: 464 DTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLY 523
YS++I+ L K G A LF EM +G ++VTY+ +I + K+
Sbjct: 244 SVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKML 303
Query: 524 RDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKA 583
R+M PD VT+S +++V G L EA+ ++ EM + PD Y L+D + K
Sbjct: 304 REMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKE 363
Query: 584 GNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTY 643
+ +A + ++ M+ G P++ T + L++++ + ++ D L + + + GL P+ TY
Sbjct: 364 NCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITY 423
Query: 644 -TLLLSCCTEARSPYDMGFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMH 702
TL+L C + E+++ G P + + G + E M
Sbjct: 424 NTLVLGFCQSGKLNAAKELFQEMVS-RGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQ 482
Query: 703 SEDRESKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAV 746
G+ + ++ + + ++A S++ + K V PD V
Sbjct: 483 KSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVV 526
Score = 63.5 bits (153), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 93/204 (45%), Gaps = 37/204 (18%)
Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
G + TY T+V ++ + A +L +MV G P+VVTY L+ LN+A
Sbjct: 415 GLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKA 474
Query: 415 LDVFKQMQ-------------VV----------------------GCEPDRVTYCTLIDI 439
L++F++MQ ++ G +PD VTY +I
Sbjct: 475 LEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGG 534
Query: 440 HAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC-LGKAGHLQAAHQLFCEMVNQGCIP 498
K G L A +++KM+ G +PD FTY+++I LG +G L ++ +L EM G
Sbjct: 535 LCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSG-LISSVELIEEMKVCGFSA 593
Query: 499 NLVTYNIMIALQAKARNYQSALKL 522
+ T ++I + + R +S L +
Sbjct: 594 DSSTIKMVIDMLSDRRLDKSFLDM 617
Score = 56.2 bits (134), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 65/287 (22%), Positives = 113/287 (39%), Gaps = 39/287 (13%)
Query: 484 AHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVME 543
A LF M+ +P + +N + + A+ + Y L + M+ G E D T +I++
Sbjct: 54 AIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMTIMIN 113
Query: 544 VLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRP 603
L A +V + + PD + LV+ + G V +A + M++ RP
Sbjct: 114 CYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRP 173
Query: 604 NVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGFCH 663
++ T ++L++ G++S+A L+ M+ G +P TY P C
Sbjct: 174 DLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTY-----------GPVLNRLCK 222
Query: 664 ELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRESKRGLVD--AVVDFLH 721
SG+ A L F +M E+R K +V V+D L
Sbjct: 223 -----SGNSALALDL------------------FRKM---EERNIKASVVQYSIVIDSLC 256
Query: 722 KSGLKEEAGSVWEVAAQKNVYPDAVKEKGMSYWLINLHVMSDGTAVI 768
K G ++A S++ K + D V + L N DG ++
Sbjct: 257 KDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKML 303
>sp|Q9CAM8|PP100_ARATH Pentatricopeptide repeat-containing protein At1g63150
OS=Arabidopsis thaliana GN=At1g63150 PE=2 SV=1
Length = 629
Score = 158 bits (399), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 102/399 (25%), Positives = 192/399 (48%), Gaps = 3/399 (0%)
Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
+ G++ D T ++++ +++ L+DQMV G +P+ T+ LIH N +
Sbjct: 146 KLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKAS 205
Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
EA+ + QM GC+PD VTY T+++ K G +D+A+++ KM+AA + + ++ II
Sbjct: 206 EAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTII 265
Query: 473 NCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFE 532
+ L K H++ A LF EM +G PN+VTYN +I + A +L +M
Sbjct: 266 DSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKIN 325
Query: 533 PDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEW 592
P+ VT++ +++ G L EAE + EM +++ PD Y LL++ + + +A +
Sbjct: 326 PNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQM 385
Query: 593 YEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTE 652
++ M+ PN+ T N+L++ F + ++ D L + M GL + TYT ++ +
Sbjct: 386 FKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQ 445
Query: 653 ARSPYDMGFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRESKRGL 712
A + M + P + S+ G D + + + E +
Sbjct: 446 AGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFI 505
Query: 713 VDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAVKEKGM 751
+ +++ + K+G + G W++ ++ PD V M
Sbjct: 506 YNTMIEGMCKAG---KVGEAWDLFCSLSIKPDVVTYNTM 541
Score = 130 bits (326), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 98/363 (26%), Positives = 168/363 (46%), Gaps = 18/363 (4%)
Query: 363 YTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQ 422
+ ++ + + +F + L +QM G ++ TY+ I+ + R + L+ AL V +M
Sbjct: 86 FNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMM 145
Query: 423 VVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQ 482
+G EPD VT +L++ + + + A+ + +M G PDTFT++ +I+ L
Sbjct: 146 KLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKAS 205
Query: 483 AAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVM 542
A L +MV +GC P+LVTY ++ K + AL L M+ A + + V ++ ++
Sbjct: 206 EAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTII 265
Query: 543 EVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLR 602
+ L +++ A +F EM K P+ Y L++ G A ML+ +
Sbjct: 266 DSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKIN 325
Query: 603 PNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGFC 662
PNV T N+L+ AF + G+L +A L + M+ + P TY LL++ GFC
Sbjct: 326 PNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLIN-----------GFC 374
Query: 663 HELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSED-----RE-SKRGLVDAV 716
F++S P+ Q + F + ED RE S+RGLV
Sbjct: 375 MHNRLDEAKQMFKFMVSKDCL-PNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNT 433
Query: 717 VDF 719
V +
Sbjct: 434 VTY 436
Score = 111 bits (277), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 88/345 (25%), Positives = 155/345 (44%), Gaps = 33/345 (9%)
Query: 342 VALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRL 401
VA+ F + + G + + TY +++ L ++ ++LL M+ PNVVT+N L
Sbjct: 276 VAVDLFTEMETK-GIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNAL 334
Query: 402 IHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGL 461
I ++ + L EA + ++M +PD +TY LI+ LD A M+K M +
Sbjct: 335 IDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDC 394
Query: 462 SPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALK 521
P+ TY+ +IN K ++ +LF EM +G + N VTY +I +A + SA
Sbjct: 395 LPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQM 454
Query: 522 LYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWG 581
+++ M + D +TYSI++ L G LD A +F +++ + +Y +++
Sbjct: 455 VFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMC 514
Query: 582 KAGNVRKAWEWY--------------------------------EAMLQAGLRPNVPTCN 609
KAG V +AW+ + M + G PN T N
Sbjct: 515 KAGKVGEAWDLFCSLSIKPDVVTYNTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYN 574
Query: 610 SLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEAR 654
+L+ A LR + + L++ M + G T +L+ + + R
Sbjct: 575 TLIRANLRDCDRAASAELIKEMRSSGFVGDASTISLVTNMLHDGR 619
Score = 100 bits (248), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 63/245 (25%), Positives = 119/245 (48%), Gaps = 1/245 (0%)
Query: 411 LNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSV 470
+++A+D+F M P V + L+ AK ++ + + ++MQ G+S D +TYS+
Sbjct: 64 VDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSI 123
Query: 471 IINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAG 530
INC + L A + +M+ G P++VT + ++ ++ A+ L M G
Sbjct: 124 FINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMG 183
Query: 531 FEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAW 590
++PD T++ ++ L EA A+ +M ++ PD YG +V+ K G++ A
Sbjct: 184 YKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLAL 243
Query: 591 EWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSC- 649
M A ++ NV N+++ + + + A L M G++P++ TY L++C
Sbjct: 244 NLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCL 303
Query: 650 CTEAR 654
C R
Sbjct: 304 CNYGR 308
Score = 94.7 bits (234), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 69/273 (25%), Positives = 124/273 (45%), Gaps = 4/273 (1%)
Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
Q D TY ++ + ++ MV C PN+ TYN LI+ + + +
Sbjct: 356 QRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVE 415
Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
+ +++F++M G + VTY T+I +AG D A ++K+M + + D TYS+++
Sbjct: 416 DGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILL 475
Query: 473 NCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFE 532
+ L G L A +F + N+ YN MI KA A L+ + +
Sbjct: 476 HGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDLFCSL---SIK 532
Query: 533 PDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEW 592
PD VTY+ ++ L L EA+ +F +M+ +P+ Y L+ + + + E
Sbjct: 533 PDVVTYNTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLIRANLRDCDRAASAEL 592
Query: 593 YEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAY 625
+ M +G + T SL++ L G+L ++
Sbjct: 593 IKEMRSSGFVGDASTI-SLVTNMLHDGRLDKSF 624
Score = 68.9 bits (167), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 79/174 (45%)
Query: 470 VIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNA 529
++ N L + A LF +MV P++V +N +++ AK ++ + L MQ
Sbjct: 53 ILRNRLSDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTL 112
Query: 530 GFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKA 589
G D TYSI + L A AV A+M + + PD L++ + + + A
Sbjct: 113 GISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDA 172
Query: 590 WEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTY 643
+ M++ G +P+ T +L+ + S+A L+ M+ G +P L TY
Sbjct: 173 VALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTY 226
Score = 51.2 bits (121), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 65/131 (49%), Gaps = 3/131 (2%)
Query: 392 QPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMD 451
+ N+ YN +I +A + EA D+F + + +PD VTY T+I L A D
Sbjct: 500 ELNIFIYNTMIEGMCKAGKVGEAWDLFCSLSI---KPDVVTYNTMISGLCSKRLLQEADD 556
Query: 452 MYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQA 511
+++KM+ G P++ TY+ +I + A+ +L EM + G + + T +++ +
Sbjct: 557 LFRKMKEDGTLPNSGTYNTLIRANLRDCDRAASAELIKEMRSSGFVGDASTISLVTNMLH 616
Query: 512 KARNYQSALKL 522
R +S L +
Sbjct: 617 DGRLDKSFLNM 627
>sp|Q9SR00|PP213_ARATH Pentatricopeptide repeat-containing protein At3g04760,
chloroplastic OS=Arabidopsis thaliana GN=At3g04760 PE=2
SV=1
Length = 602
Score = 157 bits (397), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 91/323 (28%), Positives = 152/323 (47%), Gaps = 1/323 (0%)
Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
R F D TY M+G L + K+L+Q++ D CQP V+TY LI + +
Sbjct: 185 RSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGV 244
Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
+EAL + +M G +PD TY T+I K G +D A +M + ++ G PD +Y+++
Sbjct: 245 DEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNIL 304
Query: 472 INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF 531
+ L G + +L +M ++ C PN+VTY+I+I + + A+ L + M+ G
Sbjct: 305 LRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGL 364
Query: 532 EPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWE 591
PD +Y ++ G LD A M +PD Y ++ K G +A E
Sbjct: 365 TPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALE 424
Query: 592 WYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSC-C 650
+ + + G PN + N++ SA G A H++ M++ G+ P TY ++SC C
Sbjct: 425 IFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLC 484
Query: 651 TEARSPYDMGFCHELMAVSGHPA 673
E ++ + HP+
Sbjct: 485 REGMVDEAFELLVDMRSCEFHPS 507
Score = 144 bits (363), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 86/297 (28%), Positives = 150/297 (50%), Gaps = 8/297 (2%)
Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRD----GCQPNVVTYNRLIHSYGRANY 410
G K D TY T+ I G ++ G +++ +MVR+ GC+P+V++YN L+ +
Sbjct: 258 GLKPDMFTYNTI--IRGMCKE-GMVDRAF-EMVRNLELKGCEPDVISYNILLRALLNQGK 313
Query: 411 LNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSV 470
E + +M C+P+ VTY LI + G ++ AM++ K M+ GL+PD ++Y
Sbjct: 314 WEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDP 373
Query: 471 IINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAG 530
+I + G L A + M++ GC+P++V YN ++A K AL+++ + G
Sbjct: 374 LIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVG 433
Query: 531 FEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAW 590
P+ +Y+ + L G A + EM PDE Y ++ + G V +A+
Sbjct: 434 CSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAF 493
Query: 591 EWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
E M P+V T N +L F + ++ DA ++L+ M+ G +P+ TYT+L+
Sbjct: 494 ELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLI 550
Score = 139 bits (350), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 79/290 (27%), Positives = 141/290 (48%)
Query: 359 DEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVF 418
D Y ++ + + ++LD+M P+ VTYN +I S L+ AL V
Sbjct: 157 DVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVL 216
Query: 419 KQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKA 478
Q+ C+P +TY LI+ G +D A+ + +M + GL PD FTY+ II + K
Sbjct: 217 NQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKE 276
Query: 479 GHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTY 538
G + A ++ + +GC P++++YNI++ ++ KL M + +P+ VTY
Sbjct: 277 GMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTY 336
Query: 539 SIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQ 598
SI++ L G ++EA + M+ K PD Y L+ + + G + A E+ E M+
Sbjct: 337 SILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMIS 396
Query: 599 AGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
G P++ N++L+ + G+ A + + +G P+ +Y + S
Sbjct: 397 DGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFS 446
Score = 132 bits (333), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 84/311 (27%), Positives = 150/311 (48%), Gaps = 2/311 (0%)
Query: 326 DAYQANQVLKQLQDHTVALGFFNWLR--RQAGFKHDEHTYTTMVGILGRARQFGAINKLL 383
D + N +++ + + F +R G + D +Y ++ L ++ KL+
Sbjct: 262 DMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLM 321
Query: 384 DQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKA 443
+M + C PNVVTY+ LI + R + EA+++ K M+ G PD +Y LI +
Sbjct: 322 TKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCRE 381
Query: 444 GFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTY 503
G LDVA++ + M + G PD Y+ ++ L K G A ++F ++ GC PN +Y
Sbjct: 382 GRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSY 441
Query: 504 NIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRR 563
N M + + + AL + +M + G +PD++TY+ ++ L G +DEA + +MR
Sbjct: 442 NTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRS 501
Query: 564 KNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSD 623
+ P Y +++ + KA + A E+M+ G RPN T L+ G ++
Sbjct: 502 CEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAE 561
Query: 624 AYHLLQGMLNL 634
A L ++ +
Sbjct: 562 AMELANDLVRI 572
>sp|Q9C8T7|PP101_ARATH Pentatricopeptide repeat-containing protein At1g63330
OS=Arabidopsis thaliana GN=At1g63330 PE=2 SV=2
Length = 559
Score = 157 bits (396), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 90/297 (30%), Positives = 156/297 (52%), Gaps = 4/297 (1%)
Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
+ G++ D T+TT++ L + L+D+MV+ GCQPN+VTY +++ + ++
Sbjct: 108 EMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDID 167
Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
A ++ +M+ E D V + T+ID K +D A++++K+M+ G+ P+ TYS +I
Sbjct: 168 LAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLI 227
Query: 473 NCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFE 532
+CL G A QL +M+ + PNLVT+N +I K + A KL+ DM +
Sbjct: 228 SCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSID 287
Query: 533 PDKVTYSIVMEVLGHCGY--LDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAW 590
PD TY+ ++ G C + LD+A+ +F M K+ PD Y L+ + K+ V
Sbjct: 288 PDIFTYNSLIN--GFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGT 345
Query: 591 EWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
E + M GL + T +L+ G +A + + M++ G+ P + TY++LL
Sbjct: 346 ELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILL 402
Score = 145 bits (365), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 98/344 (28%), Positives = 162/344 (47%), Gaps = 22/344 (6%)
Query: 347 FNWLRRQ--AGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIH- 403
FN L + A + D + T++ L + R L +M G +PNVVTY+ LI
Sbjct: 170 FNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISC 229
Query: 404 --SYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGL 461
SYGR ++A + M P+ VT+ LID K G A ++ M +
Sbjct: 230 LCSYGR---WSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSI 286
Query: 462 SPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALK 521
PD FTY+ +IN L A Q+F MV++ C P+L TYN +I K++ + +
Sbjct: 287 DPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTE 346
Query: 522 LYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWG 581
L+R+M + G D VTY+ +++ L H G D A+ VF +M PD Y +L+D
Sbjct: 347 LFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLC 406
Query: 582 KAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQ 641
G + KA E ++ M ++ ++ ++ +++ + G++ D + L + G+KP++
Sbjct: 407 NNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVV 466
Query: 642 TYTLLLSCCTEARSPYDMGFCHELMAVSGHPAHMFLLSMPSPGP 685
TY ++S G C + + A+ L M GP
Sbjct: 467 TYNTMIS-----------GLCSKRLL---QEAYALLKKMKEDGP 496
Score = 139 bits (350), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 86/307 (28%), Positives = 155/307 (50%), Gaps = 7/307 (2%)
Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
++ G H+ +TY ++ R Q LL +M++ G +P++VT + L++ Y +
Sbjct: 37 QRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRI 96
Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLID---IHAKAGFLDVAMDMYKKMQAAGLSPDTFTY 468
++A+ + QM +G PD +T+ TLI +H KA A+ + +M G P+ TY
Sbjct: 97 SDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKAS---EAVALVDRMVQRGCQPNLVTY 153
Query: 469 SVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQN 528
V++N L K G + A L +M ++V +N +I K R+ AL L+++M+
Sbjct: 154 GVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMET 213
Query: 529 AGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRK 588
G P+ VTYS ++ L G +A + ++M K P+ + L+D + K G +
Sbjct: 214 KGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVE 273
Query: 589 AWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTY-TLLL 647
A + ++ M++ + P++ T NSL++ F +L A + + M++ P L TY TL+
Sbjct: 274 AEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIK 333
Query: 648 SCCTEAR 654
C R
Sbjct: 334 GFCKSKR 340
Score = 137 bits (345), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 98/393 (24%), Positives = 184/393 (46%), Gaps = 12/393 (3%)
Query: 382 LLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHA 441
L+DQMV G +P+ +T+ LIH N +EA+ + +M GC+P+ VTY +++
Sbjct: 102 LVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLC 161
Query: 442 KAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLV 501
K G +D+A ++ KM+AA + D ++ II+ L K H+ A LF EM +G PN+V
Sbjct: 162 KRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVV 221
Query: 502 TYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEM 561
TY+ +I+ + A +L DM P+ VT++ +++ G EAE + +M
Sbjct: 222 TYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDM 281
Query: 562 RRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQL 621
+++ PD Y L++ + + KA + +E M+ P++ T N+L+ F + ++
Sbjct: 282 IKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRV 341
Query: 622 SDAYHLLQGMLNLGLKPSLQTYTLLLSC------CTEARSPYDMGFCHELMAVSGHPAHM 675
D L + M + GL TYT L+ C A+ + + M G P +
Sbjct: 342 EDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVF------KQMVSDGVPPDI 395
Query: 676 FLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRESKRGLVDAVVDFLHKSGLKEEAGSVWEV 735
S+ G + + M + + + +++ + K+G ++ ++
Sbjct: 396 MTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCS 455
Query: 736 AAQKNVYPDAVKEKGMSYWLINLHVMSDGTAVI 768
+ K V P+ V M L + ++ + A++
Sbjct: 456 LSLKGVKPNVVTYNTMISGLCSKRLLQEAYALL 488
Score = 135 bits (339), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 88/305 (28%), Positives = 155/305 (50%), Gaps = 1/305 (0%)
Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLI 402
AL F + + G + + TY++++ L ++ ++LL M+ PN+VT+N LI
Sbjct: 204 ALNLFKEMETK-GIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALI 262
Query: 403 HSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLS 462
++ + EA + M +PD TY +LI+ LD A M++ M +
Sbjct: 263 DAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCF 322
Query: 463 PDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKL 522
PD TY+ +I K+ ++ +LF EM ++G + + VTY +I + +A K+
Sbjct: 323 PDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKV 382
Query: 523 YRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGK 582
++ M + G PD +TYSI+++ L + G L++A VF M++ D +Y +++ K
Sbjct: 383 FKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCK 442
Query: 583 AGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQT 642
AG V W+ + ++ G++PNV T N+++S L +AY LL+ M G P T
Sbjct: 443 AGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGT 502
Query: 643 YTLLL 647
Y L+
Sbjct: 503 YNTLI 507
Score = 131 bits (330), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 103/396 (26%), Positives = 176/396 (44%), Gaps = 24/396 (6%)
Query: 363 YTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQ 422
+ ++ + + ++F + L ++M R G N+ TYN LI+ + R + ++ AL + +M
Sbjct: 13 FNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMM 72
Query: 423 VVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQ 482
+G EP VT +L++ + + A+ + +M G PDT T++ +I+ L
Sbjct: 73 KLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKAS 132
Query: 483 AAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVM 542
A L MV +GC PNLVTY +++ K + A L M+ A E D V ++ ++
Sbjct: 133 EAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTII 192
Query: 543 EVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLR 602
+ L ++D+A +F EM K P+ Y L+ G A + M++ +
Sbjct: 193 DSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKIN 252
Query: 603 PNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGFC 662
PN+ T N+L+ AF++ G+ +A L M+ + P + TY L++ GFC
Sbjct: 253 PNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLIN-----------GFC 301
Query: 663 HELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSED-----RE-SKRGLVDAV 716
F++S PD + F + ED RE S RGLV
Sbjct: 302 MHDRLDKAKQMFEFMVS-KDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDT 360
Query: 717 VDF------LHKSGLKEEAGSVWEVAAQKNVYPDAV 746
V + L G + A V++ V PD +
Sbjct: 361 VTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIM 396
Score = 114 bits (286), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 70/270 (25%), Positives = 136/270 (50%)
Query: 362 TYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQM 421
T+ ++ + +F KL D M++ P++ TYN LI+ + + L++A +F+ M
Sbjct: 257 TFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFM 316
Query: 422 QVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHL 481
C PD TY TLI K+ ++ +++++M GL DT TY+ +I L G
Sbjct: 317 VSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDC 376
Query: 482 QAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIV 541
A ++F +MV+ G P+++TY+I++ + AL+++ MQ + + D Y+ +
Sbjct: 377 DNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTM 436
Query: 542 MEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGL 601
+E + G +D+ +F + K P+ Y ++ +++A+ + M + G
Sbjct: 437 IEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGP 496
Query: 602 RPNVPTCNSLLSAFLRVGQLSDAYHLLQGM 631
P+ T N+L+ A LR G + + L++ M
Sbjct: 497 LPDSGTYNTLIRAHLRDGDKAASAELIREM 526
Score = 102 bits (253), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 105/222 (47%)
Query: 359 DEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVF 418
D TY T++ ++++ +L +M G + VTY LI + A VF
Sbjct: 324 DLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVF 383
Query: 419 KQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKA 478
KQM G PD +TY L+D G L+ A++++ MQ + + D + Y+ +I + KA
Sbjct: 384 KQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKA 443
Query: 479 GHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTY 538
G + LFC + +G PN+VTYN MI+ R Q A L + M+ G PD TY
Sbjct: 444 GKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTY 503
Query: 539 SIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLW 580
+ ++ G + + EMR +V D GL+ ++
Sbjct: 504 NTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLVANML 545
Score = 98.2 bits (243), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 114/228 (50%), Gaps = 1/228 (0%)
Query: 428 PDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQL 487
P + L+ AK D+ + + +KMQ G+S + +TY+++INC + + A L
Sbjct: 8 PSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALAL 67
Query: 488 FCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGH 547
+M+ G P++VT + ++ + A+ L M G+ PD +T++ ++ L
Sbjct: 68 LGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFL 127
Query: 548 CGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPT 607
EA A+ M ++ P+ YG++V+ K G++ A+ M A + +V
Sbjct: 128 HNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVI 187
Query: 608 CNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSC-CTEAR 654
N+++ + + + DA +L + M G++P++ TY+ L+SC C+ R
Sbjct: 188 FNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGR 235
Score = 92.8 bits (229), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 101/200 (50%), Gaps = 1/200 (0%)
Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
G D TYTT++ L K+ QMV DG P+++TY+ L+ L +A
Sbjct: 355 GLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKA 414
Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
L+VF MQ + D Y T+I+ KAG +D D++ + G+ P+ TY+ +I+
Sbjct: 415 LEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISG 474
Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPD 534
L LQ A+ L +M G +P+ TYN +I + + ++ +L R+M++ F D
Sbjct: 475 LCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGD 534
Query: 535 KVTYSIVMEVLGHCGYLDEA 554
T +V +L H G LD++
Sbjct: 535 ASTIGLVANML-HDGRLDKS 553
Score = 56.6 bits (135), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 37/171 (21%), Positives = 78/171 (45%), Gaps = 1/171 (0%)
Query: 491 MVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGY 550
MV +P++ +N +++ AK + + + L MQ G + TY+I++
Sbjct: 1 MVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQ 60
Query: 551 LDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNS 610
+ A A+ +M + + P L++ + + A + M++ G RP+ T +
Sbjct: 61 ISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTT 120
Query: 611 LLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGF 661
L+ + S+A L+ M+ G +P+L TY ++++ + R D+ F
Sbjct: 121 LIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCK-RGDIDLAF 170
>sp|Q9CAN5|PPR98_ARATH Pentatricopeptide repeat-containing protein At1g63080,
mitochondrial OS=Arabidopsis thaliana GN=At1g63080 PE=2
SV=1
Length = 614
Score = 157 bits (396), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 116/403 (28%), Positives = 197/403 (48%), Gaps = 20/403 (4%)
Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
+ G++ D T+TT+V L + + L+++MV GCQP++VTY +I+ + +
Sbjct: 163 EMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPD 222
Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
AL++ +M+ E D V Y T+ID K +D A++++ +M G+ PD FTYS +I
Sbjct: 223 LALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLI 282
Query: 473 NCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFE 532
+CL G A +L +M+ + PN+VT+N +I AK A KL+ +M +
Sbjct: 283 SCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSID 342
Query: 533 PDKVTYSIVMEVLGHCGY--LDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAW 590
P+ VTY+ ++ G C + LDEA+ +F M K+ +PD Y L++ + KA V
Sbjct: 343 PNIVTYNSLIN--GFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGM 400
Query: 591 EWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTY-TLLLSC 649
E + M + GL N T +L+ F + +A + + M++ G+ P++ TY TLL
Sbjct: 401 ELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGL 460
Query: 650 CTEARSPYDMGFCHELMAVSGHPAHMFLLSMPSPGP-DGQNVRDHVGSFLEMMHSEDRES 708
C + M E + S ++ ++ S G V D F + S
Sbjct: 461 CKNGKLEKAM-VVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSL-------S 512
Query: 709 KRGLVDAVVDF------LHKSGLKEEAGSVWEVAAQKNVYPDA 745
+G+ V+ + K GLKEEA +++ + PD+
Sbjct: 513 LKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDS 555
Score = 149 bits (375), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 110/413 (26%), Positives = 192/413 (46%), Gaps = 6/413 (1%)
Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
G H+ +TY M+ L R Q +L +M++ G P++VT N L++ + N ++EA
Sbjct: 95 GVSHNLYTYNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEA 154
Query: 415 LDVFKQMQVVGCEPDRVTYCTLID---IHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
+ + QM +G +PD VT+ TL+ H KA A+ + ++M G PD TY +
Sbjct: 155 VALVDQMVEMGYQPDTVTFTTLVHGLFQHNKAS---EAVALVERMVVKGCQPDLVTYGAV 211
Query: 472 INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF 531
IN L K G A L +M ++V Y+ +I K R+ AL L+ +M N G
Sbjct: 212 INGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGI 271
Query: 532 EPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWE 591
PD TYS ++ L + G +A + ++M + P+ + L+D + K G + +A +
Sbjct: 272 RPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEK 331
Query: 592 WYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCT 651
++ M+Q + PN+ T NSL++ F +L +A + M++ P + TY L++
Sbjct: 332 LFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFC 391
Query: 652 EARSPYDMGFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRESKRG 711
+A+ D M+ G + + G + D+ + M S+
Sbjct: 392 KAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIM 451
Query: 712 LVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAVKEKGMSYWLINLHVMSDG 764
+ ++D L K+G E+A V+E + + PD MS + + DG
Sbjct: 452 TYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDG 504
Score = 142 bits (357), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 88/305 (28%), Positives = 155/305 (50%), Gaps = 1/305 (0%)
Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLI 402
AL F + + G + D TY++++ L ++ ++LL M+ PNVVT+N LI
Sbjct: 259 ALNLFTEMDNK-GIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLI 317
Query: 403 HSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLS 462
++ + L EA +F +M +P+ VTY +LI+ LD A ++ M +
Sbjct: 318 DAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCL 377
Query: 463 PDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKL 522
PD TY+ +IN KA + +LF +M +G + N VTY +I +A + +A +
Sbjct: 378 PDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMV 437
Query: 523 YRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGK 582
++ M + G P+ +TY+ +++ L G L++A VF +++ PD Y ++ + K
Sbjct: 438 FKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCK 497
Query: 583 AGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQT 642
AG V W+ + ++ G++P+V N+++S F + G +AY L M G P T
Sbjct: 498 AGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGT 557
Query: 643 YTLLL 647
Y L+
Sbjct: 558 YNTLI 562
Score = 140 bits (354), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 87/304 (28%), Positives = 151/304 (49%), Gaps = 2/304 (0%)
Query: 362 TYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQM 421
T+ +++ + + KL D+M++ PN+VTYN LI+ + + L+EA +F M
Sbjct: 312 TFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLM 371
Query: 422 QVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHL 481
C PD VTY TLI+ KA + M++++ M GL +T TY+ +I+ +A
Sbjct: 372 VSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDC 431
Query: 482 QAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIV 541
A +F +MV+ G PN++TYN ++ K + A+ ++ +Q + EPD TY+I+
Sbjct: 432 DNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIM 491
Query: 542 MEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGL 601
E + G +++ +F + K PD Y ++ + K G +A+ + M + G
Sbjct: 492 SEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGP 551
Query: 602 RPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGF 661
P+ T N+L+ A LR G + + L++ M + TY L+ + R D GF
Sbjct: 552 LPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTYGLVTDMLHDGR--LDKGF 609
Query: 662 CHEL 665
L
Sbjct: 610 LEVL 613
Score = 136 bits (343), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 94/347 (27%), Positives = 161/347 (46%), Gaps = 21/347 (6%)
Query: 342 VALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRL 401
+AL N + + + D Y+T++ L + R L +M G +P+V TY+ L
Sbjct: 223 LALNLLNKMEK-GKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSL 281
Query: 402 IH---SYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQA 458
I +YGR ++A + M P+ VT+ +LID AK G L A ++ +M
Sbjct: 282 ISCLCNYGR---WSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQ 338
Query: 459 AGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQS 518
+ P+ TY+ +IN L A Q+F MV++ C+P++VTYN +I KA+
Sbjct: 339 RSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVD 398
Query: 519 ALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVD 578
++L+RDM G + VTY+ ++ D A+ VF +M P+ Y L+D
Sbjct: 399 GMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLD 458
Query: 579 LWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKP 638
K G + KA +E + ++ + P++ T N + + G++ D + L + G+KP
Sbjct: 459 GLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKP 518
Query: 639 SLQTYTLLLSCCTEARSPYDMGFCHELMAVSGHPAHMFLLSMPSPGP 685
+ Y ++S GFC + + A+ + M GP
Sbjct: 519 DVIAYNTMIS-----------GFCKKGLK---EEAYTLFIKMKEDGP 551
Score = 122 bits (307), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 82/286 (28%), Positives = 137/286 (47%)
Query: 363 YTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQ 422
++ ++ + + ++F + ++M G N+ TYN +I+ R + L+ AL + +M
Sbjct: 68 FSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNIMINCLCRRSQLSFALAILGKMM 127
Query: 423 VVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQ 482
+G P VT +L++ + A+ + +M G PDT T++ +++ L +
Sbjct: 128 KLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKAS 187
Query: 483 AAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVM 542
A L MV +GC P+LVTY +I K AL L M+ E D V YS V+
Sbjct: 188 EAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVI 247
Query: 543 EVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLR 602
+ L ++D+A +F EM K PD Y L+ G A ML+ +
Sbjct: 248 DSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKIN 307
Query: 603 PNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
PNV T NSL+ AF + G+L +A L M+ + P++ TY L++
Sbjct: 308 PNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLIN 353
Score = 114 bits (284), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 70/221 (31%), Positives = 114/221 (51%)
Query: 359 DEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVF 418
D TY T++ +A++ +L M R G N VTY LIH + +A+ + A VF
Sbjct: 379 DVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVF 438
Query: 419 KQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKA 478
KQM G P+ +TY TL+D K G L+ AM +++ +Q + + PD +TY+++ + KA
Sbjct: 439 KQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKA 498
Query: 479 GHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTY 538
G ++ LFC + +G P+++ YN MI+ K + A L+ M+ G PD TY
Sbjct: 499 GKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTY 558
Query: 539 SIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDL 579
+ ++ G + + EMR + D YGL+ D+
Sbjct: 559 NTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTYGLVTDM 599
Score = 102 bits (254), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 67/245 (27%), Positives = 118/245 (48%), Gaps = 1/245 (0%)
Query: 411 LNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSV 470
L+EA+D+F +M P V + L+ AK D+ + +KM+ G+S + +TY++
Sbjct: 46 LDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNI 105
Query: 471 IINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAG 530
+INCL + L A + +M+ G P++VT N ++ A+ L M G
Sbjct: 106 MINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMG 165
Query: 531 FEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAW 590
++PD VT++ ++ L EA A+ M K PD YG +++ K G A
Sbjct: 166 YQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLAL 225
Query: 591 EWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSC- 649
M + + +V ++++ + + + DA +L M N G++P + TY+ L+SC
Sbjct: 226 NLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCL 285
Query: 650 CTEAR 654
C R
Sbjct: 286 CNYGR 290
Score = 99.8 bits (247), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 68/266 (25%), Positives = 122/266 (45%)
Query: 382 LLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHA 441
L +MV+ P++V +++L+ + + + + ++M+++G + TY +I+
Sbjct: 52 LFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNIMINCLC 111
Query: 442 KAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLV 501
+ L A+ + KM G P T + ++N + A L +MV G P+ V
Sbjct: 112 RRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTV 171
Query: 502 TYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEM 561
T+ ++ + A+ L M G +PD VTY V+ L G D A + +M
Sbjct: 172 TFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKM 231
Query: 562 RRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQL 621
+ D +Y ++D K +V A + M G+RP+V T +SL+S G+
Sbjct: 232 EKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRW 291
Query: 622 SDAYHLLQGMLNLGLKPSLQTYTLLL 647
SDA LL ML + P++ T+ L+
Sbjct: 292 SDASRLLSDMLERKINPNVVTFNSLI 317
>sp|Q9FIT7|PP442_ARATH Pentatricopeptide repeat-containing protein At5g61990,
mitochondrial OS=Arabidopsis thaliana GN=At5g61990 PE=2
SV=1
Length = 974
Score = 156 bits (395), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 99/288 (34%), Positives = 148/288 (51%), Gaps = 2/288 (0%)
Query: 361 HTYTTMV-GILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFK 419
+TY T+V G+ GA N ++ +M+ GC+PNVV Y LI ++ + + +A+ V K
Sbjct: 418 YTYGTVVKGMCSSGDLDGAYN-IVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLK 476
Query: 420 QMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAG 479
+M+ G PD Y +LI +KA +D A +M GL P+ FTY I+ +A
Sbjct: 477 EMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEAS 536
Query: 480 HLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYS 539
+A + EM G +PN V +I K A YR M + G D TY+
Sbjct: 537 EFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYT 596
Query: 540 IVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQA 599
++M L +D+AE +F EMR K PD YG+L++ + K GN++KA ++ M++
Sbjct: 597 VLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEE 656
Query: 600 GLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
GL PNV N LL F R G++ A LL M GL P+ TY ++
Sbjct: 657 GLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTII 704
Score = 139 bits (350), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 91/340 (26%), Positives = 156/340 (45%), Gaps = 43/340 (12%)
Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
R G D +Y ++ + + + D+MV +G PNV+ YN L+ + R+ +
Sbjct: 619 RGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEI 678
Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
+A ++ +M V G P+ VTYCT+ID + K+G L A ++ +M+ GL PD+F Y+ +
Sbjct: 679 EKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTL 738
Query: 472 INCLGKAGHLQAAHQLF------------------------------CEMVNQ---GCI- 497
++ + ++ A +F E++N+ G
Sbjct: 739 VDGCCRLNDVERAITIFGTNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFD 798
Query: 498 ----PNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDE 553
PN VTYNIMI K N ++A +L+ MQNA P +TY+ ++ G E
Sbjct: 799 RFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAE 858
Query: 554 AEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQA-----GLRPNVPTC 608
VF E PD +Y ++++ + K G KA + M G + ++ TC
Sbjct: 859 MFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTC 918
Query: 609 NSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
+LLS F +VG++ A +++ M+ L P T L++
Sbjct: 919 RALLSGFAKVGEMEVAEKVMENMVRLQYIPDSATVIELIN 958
Score = 135 bits (341), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 94/374 (25%), Positives = 175/374 (46%), Gaps = 7/374 (1%)
Query: 280 IPAGLAPFSRHFASTGNVVESVSRILRQWKWGPLAEEALGNTNYSMDAYQANQVLKQLQD 339
I +GL P ++ +AS ++E R + + G + N + Y V+K +
Sbjct: 374 IASGLIPQAQAYAS---LIEGYCR-EKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCS 429
Query: 340 HTVALGFFNWLRRQ--AGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVT 397
G +N ++ +G + + YTT++ + +FG ++L +M G P++
Sbjct: 430 SGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFC 489
Query: 398 YNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQ 457
YN LI +A ++EA +M G +P+ TY I + +A A K+M+
Sbjct: 490 YNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMR 549
Query: 458 AAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQ 517
G+ P+ + +IN K G + A + MV+QG + + TY +++ K
Sbjct: 550 ECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVD 609
Query: 518 SALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLV 577
A +++R+M+ G PD +Y +++ G + +A ++F EM + P+ +Y +L+
Sbjct: 610 DAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLL 669
Query: 578 DLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLK 637
+ ++G + KA E + M GL PN T +++ + + G L++A+ L M GL
Sbjct: 670 GGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLV 729
Query: 638 PSLQTYTLLLS-CC 650
P YT L+ CC
Sbjct: 730 PDSFVYTTLVDGCC 743
Score = 135 bits (340), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 95/336 (28%), Positives = 154/336 (45%), Gaps = 42/336 (12%)
Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
+ G K + TY + A +F + +K + +M G PN V LI+ Y + +
Sbjct: 515 ENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVI 574
Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
EA ++ M G D TY L++ K +D A +++++M+ G++PD F+Y V+I
Sbjct: 575 EACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLI 634
Query: 473 NCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFE 532
N K G++Q A +F EMV +G PN++ YN+++ ++ + A +L +M G
Sbjct: 635 NGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLH 694
Query: 533 PDKVTYSIVMEVLGHC--GYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKA- 589
P+ VTY +++ G+C G L EA +F EM+ K VPD VY LVD + +V +A
Sbjct: 695 PNAVTYCTIID--GYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAI 752
Query: 590 ----------------------W-----------EWYEAMLQAGL----RPNVPTCNSLL 612
W E ++ +PN T N ++
Sbjct: 753 TIFGTNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMI 812
Query: 613 SAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
+ G L A L M N L P++ TYT LL+
Sbjct: 813 DYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLN 848
Score = 116 bits (290), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 89/413 (21%), Positives = 177/413 (42%), Gaps = 4/413 (0%)
Query: 334 LKQLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQP 393
+K+L+D L + L G D HTY+ ++ L + R A L+ +MV G
Sbjct: 290 IKRLEDAKSLLVEMDSL----GVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMVSHGINI 345
Query: 394 NVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMY 453
Y+ I + + +A +F M G P Y +LI+ + + + ++
Sbjct: 346 KPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELL 405
Query: 454 KKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKA 513
+M+ + +TY ++ + +G L A+ + EM+ GC PN+V Y +I +
Sbjct: 406 VEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQN 465
Query: 514 RNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVY 573
+ A+++ ++M+ G PD Y+ ++ L +DEA + EM P+ Y
Sbjct: 466 SRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTY 525
Query: 574 GLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLN 633
G + + +A A ++ + M + G+ PN C L++ + + G++ +A + M++
Sbjct: 526 GAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVD 585
Query: 634 LGLKPSLQTYTLLLSCCTEARSPYDMGFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDH 693
G+ +TYT+L++ + D M G +F + G
Sbjct: 586 QGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQK 645
Query: 694 VGSFLEMMHSEDRESKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAV 746
S + M E + + ++ +SG E+A + + + K ++P+AV
Sbjct: 646 ASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAV 698
Score = 94.7 bits (234), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 71/273 (26%), Positives = 118/273 (43%)
Query: 381 KLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIH 440
KL + M+ G P TY+ LI + L +A + +M +G D TY LID
Sbjct: 263 KLKESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGL 322
Query: 441 AKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNL 500
K D A + +M + G++ + Y I + K G ++ A LF M+ G IP
Sbjct: 323 LKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQA 382
Query: 501 VTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAE 560
Y +I + +N + +L +M+ TY V++ + G LD A + E
Sbjct: 383 QAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKE 442
Query: 561 MRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQ 620
M P+ +Y L+ + + A + M + G+ P++ NSL+ + +
Sbjct: 443 MIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKR 502
Query: 621 LSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEA 653
+ +A L M+ GLKP+ TY +S EA
Sbjct: 503 MDEARSFLVEMVENGLKPNAFTYGAFISGYIEA 535
Score = 88.2 bits (217), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 70/268 (26%), Positives = 120/268 (44%), Gaps = 21/268 (7%)
Query: 401 LIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFL-------------- 446
L+ + R N L+ DV+K M D TY LI H +AG +
Sbjct: 192 LLDALLRWNRLDLFWDVYKGMVERNVVFDVKTYHMLIIAHCRAGNVQLGKDVLFKTEKEF 251
Query: 447 -------DVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPN 499
D A+ + + M GL P +TY V+I+ L K L+ A L EM + G +
Sbjct: 252 RTATLNVDGALKLKESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLD 311
Query: 500 LVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFA 559
TY+++I K RN +A L +M + G Y + V+ G +++A+A+F
Sbjct: 312 NHTYSLLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFD 371
Query: 560 EMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVG 619
M +P Y L++ + + NVR+ +E M + + + T +++ G
Sbjct: 372 GMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSG 431
Query: 620 QLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
L AY++++ M+ G +P++ YT L+
Sbjct: 432 DLDGAYNIVKEMIASGCRPNVVIYTTLI 459
Score = 41.6 bits (96), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 65/150 (43%), Gaps = 22/150 (14%)
Query: 540 IVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVR------------ 587
++++ L LD V+ M +N V D Y +L+ +AGNV+
Sbjct: 191 VLLDALLRWNRLDLFWDVYKGMVERNVVFDVKTYHMLIIAHCRAGNVQLGKDVLFKTEKE 250
Query: 588 ---------KAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKP 638
A + E+M+ GL P T + L+ ++ +L DA LL M +LG+
Sbjct: 251 FRTATLNVDGALKLKESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSL 310
Query: 639 SLQTYTLLLSCCTEAR-SPYDMGFCHELMA 667
TY+LL+ + R + G HE+++
Sbjct: 311 DNHTYSLLIDGLLKGRNADAAKGLVHEMVS 340
Score = 37.0 bits (84), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 28/130 (21%), Positives = 56/130 (43%), Gaps = 19/130 (14%)
Query: 537 TYSIVMEVLGHCGYLDEAEAVFAEMRRKNW-------------------VPDEPVYGLLV 577
++S + L + G ++A +V M +NW D ++G+L
Sbjct: 99 SFSFLALDLCNFGSFEKALSVVERMIERNWPVAEVWSSIVRCSQEFVGKSDDGVLFGILF 158
Query: 578 DLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLK 637
D + G + +A + + + L P + C LL A LR +L + + +GM+ +
Sbjct: 159 DGYIAKGYIEEAVFVFSSSMGLELVPRLSRCKVLLDALLRWNRLDLFWDVYKGMVERNVV 218
Query: 638 PSLQTYTLLL 647
++TY +L+
Sbjct: 219 FDVKTYHMLI 228
>sp|Q9LFF1|PP281_ARATH Pentatricopeptide repeat-containing protein At3g53700,
chloroplastic OS=Arabidopsis thaliana GN=MEE40 PE=2 SV=1
Length = 754
Score = 156 bits (395), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 94/313 (30%), Positives = 158/313 (50%), Gaps = 1/313 (0%)
Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLI 402
AL F + Q GF D++T+ T+V L +A +++D M+++G P+V TYN +I
Sbjct: 278 ALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVI 337
Query: 403 HSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLS 462
+ + EA++V QM C P+ VTY TLI K ++ A ++ + + + G+
Sbjct: 338 SGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGIL 397
Query: 463 PDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKL 522
PD T++ +I L + + A +LF EM ++GC P+ TYN++I AL +
Sbjct: 398 PDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNM 457
Query: 523 YRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGK 582
+ M+ +G +TY+ +++ EAE +F EM + Y L+D K
Sbjct: 458 LKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCK 517
Query: 583 AGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQT 642
+ V A + + M+ G +P+ T NSLL+ F R G + A ++Q M + G +P + T
Sbjct: 518 SRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVT 577
Query: 643 Y-TLLLSCCTEAR 654
Y TL+ C R
Sbjct: 578 YGTLISGLCKAGR 590
Score = 143 bits (361), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 95/331 (28%), Positives = 163/331 (49%), Gaps = 38/331 (11%)
Query: 355 GFKHDEHTYTT-MVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNE 413
G DE T+TT M G + GA+ ++ +QMV GC + V+ N ++H + + + +
Sbjct: 219 GLVPDEKTFTTVMQGYIEEGDLDGAL-RIREQMVEFGCSWSNVSVNVIVHGFCKEGRVED 277
Query: 414 ALDVFKQM-QVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
AL+ ++M G PD+ T+ TL++ KAG + A+++ M G PD +TY+ +I
Sbjct: 278 ALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVI 337
Query: 473 NCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAK-------------------- 512
+ L K G ++ A ++ +M+ + C PN VTYN +I+ K
Sbjct: 338 SGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGIL 397
Query: 513 ---------------ARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAV 557
RN++ A++L+ +M++ G EPD+ TY+++++ L G LDEA +
Sbjct: 398 PDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNM 457
Query: 558 FAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLR 617
+M Y L+D + KA R+A E ++ M G+ N T N+L+ +
Sbjct: 458 LKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCK 517
Query: 618 VGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
++ DA L+ M+ G KP TY LL+
Sbjct: 518 SRRVEDAAQLMDQMIMEGQKPDKYTYNSLLT 548
Score = 136 bits (343), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 90/321 (28%), Positives = 144/321 (44%), Gaps = 35/321 (10%)
Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
Q G+ D +TY +++ L + + ++LDQM+ C PN VTYN LI + + N +
Sbjct: 323 QEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVE 382
Query: 413 EA-----------------------------------LDVFKQMQVVGCEPDRVTYCTLI 437
EA +++F++M+ GCEPD TY LI
Sbjct: 383 EATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLI 442
Query: 438 DIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCI 497
D G LD A++M K+M+ +G + TY+ +I+ KA + A ++F EM G
Sbjct: 443 DSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVS 502
Query: 498 PNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAV 557
N VTYN +I K+R + A +L M G +PDK TY+ ++ G + +A +
Sbjct: 503 RNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADI 562
Query: 558 FAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLR 617
M PD YG L+ KAG V A + ++ G+ N ++ R
Sbjct: 563 VQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPHAYNPVIQGLFR 622
Query: 618 VGQLSDAYHLLQGMLNLGLKP 638
+ ++A +L + ML P
Sbjct: 623 KRKTTEAINLFREMLEQNEAP 643
Score = 132 bits (331), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 89/305 (29%), Positives = 147/305 (48%), Gaps = 19/305 (6%)
Query: 338 QDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVT 397
++H VA+ F +R + G + DE TY ++ L + +L QM GC +V+T
Sbjct: 414 RNHRVAMELFEEMRSK-GCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVIT 472
Query: 398 YNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQ 457
YN LI + +AN EA ++F +M+V G + VTY TLID K+ ++ A + +M
Sbjct: 473 YNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMI 532
Query: 458 AAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQ 517
G PD +TY+ ++ + G ++ A + M + GC P++VTY +I+ KA +
Sbjct: 533 MEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVE 592
Query: 518 SALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLV 577
A KL R +Q G Y+ V++ L EA +F EM +N P + V +V
Sbjct: 593 VASKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAPPDAVSYRIV 652
Query: 578 --DLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLG 635
L G +R+A ++ +L+ G P + S Y L +G+L L
Sbjct: 653 FRGLCNGGGPIREAVDFLVELLEKGFVP----------------EFSSLYMLAEGLLTLS 696
Query: 636 LKPSL 640
++ +L
Sbjct: 697 MEETL 701
Score = 127 bits (320), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 86/322 (26%), Positives = 156/322 (48%), Gaps = 3/322 (0%)
Query: 334 LKQLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQP 393
L+ D + AL FN ++ F + Y ++ LGR+ F + K+L+ M C+
Sbjct: 57 LRSQPDDSAALRLFNLASKKPNFSPEPALYEEILLRLGRSGSFDDMKKILEDMKSSRCEM 116
Query: 394 NVVTYNRLIHSYGRANYLNEALDVFKQM-QVVGCEPDRVTYCTLIDIHAKAGFLDVAMDM 452
T+ LI SY + +E L V M G +PD Y ++++ L +
Sbjct: 117 GTSTFLILIESYAQFELQDEILSVVDWMIDEFGLKPDTHFYNRMLNLLVDGNSLKLVEIS 176
Query: 453 YKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAK 512
+ KM G+ PD T++V+I L +A L+ A + +M + G +P+ T+ ++ +
Sbjct: 177 HAKMSVWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIE 236
Query: 513 ARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKN-WVPDEP 571
+ AL++ M G V+ ++++ G +++A EM ++ + PD+
Sbjct: 237 EGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQY 296
Query: 572 VYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGM 631
+ LV+ KAG+V+ A E + MLQ G P+V T NS++S ++G++ +A +L M
Sbjct: 297 TFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQM 356
Query: 632 LNLGLKPSLQTY-TLLLSCCTE 652
+ P+ TY TL+ + C E
Sbjct: 357 ITRDCSPNTVTYNTLISTLCKE 378
>sp|Q0WVK7|PPR12_ARATH Pentatricopeptide repeat-containing protein At1g05670,
mitochondrial OS=Arabidopsis thaliana GN=At1g05670 PE=2
SV=1
Length = 741
Score = 156 bits (394), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 89/296 (30%), Positives = 148/296 (50%)
Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
++ G K + + Y +++G+L R + + +M+R G P+ V Y LI + + +
Sbjct: 308 KRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDI 367
Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
A F +M PD +TY +I + G + A ++ +M GL PD+ T++ +
Sbjct: 368 RAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTEL 427
Query: 472 INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF 531
IN KAGH++ A ++ M+ GC PN+VTY +I K + SA +L +M G
Sbjct: 428 INGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGL 487
Query: 532 EPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWE 591
+P+ TY+ ++ L G ++EA + E D Y L+D + K+G + KA E
Sbjct: 488 QPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQE 547
Query: 592 WYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
+ ML GL+P + T N L++ F G L D LL ML G+ P+ T+ L+
Sbjct: 548 ILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLV 603
Score = 149 bits (376), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 98/330 (29%), Positives = 163/330 (49%), Gaps = 11/330 (3%)
Query: 350 LRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRAN 409
L G+ D +Y+T+V R + + KL++ M R G +PN Y +I R
Sbjct: 271 LMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRIC 330
Query: 410 YLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYS 469
L EA + F +M G PD V Y TLID K G + A + +M + ++PD TY+
Sbjct: 331 KLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYT 390
Query: 470 VIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNA 529
II+ + G + A +LF EM +G P+ VT+ +I KA + + A +++ M A
Sbjct: 391 AIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQA 450
Query: 530 GFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKA 589
G P+ VTY+ +++ L G LD A + EM + P+ Y +V+ K+GN+ +A
Sbjct: 451 GCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEA 510
Query: 590 WEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSC 649
+ AGL + T +L+ A+ + G++ A +L+ ML GL+P++ T+ +L++
Sbjct: 511 VKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMN- 569
Query: 650 CTEARSPYDMGFCHELMAVSGHPAHMFLLS 679
GFC M G ++L+
Sbjct: 570 ----------GFCLHGMLEDGEKLLNWMLA 589
Score = 147 bits (371), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 108/382 (28%), Positives = 178/382 (46%), Gaps = 9/382 (2%)
Query: 347 FNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYG 406
F+ + RQ G D YTT++ + A +K +M P+V+TY +I +
Sbjct: 339 FSEMIRQ-GILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFC 397
Query: 407 RANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTF 466
+ + EA +F +M G EPD VT+ LI+ + KAG + A ++ M AG SP+
Sbjct: 398 QIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVV 457
Query: 467 TYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDM 526
TY+ +I+ L K G L +A++L EM G PN+ TYN ++ K+ N + A+KL +
Sbjct: 458 TYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEF 517
Query: 527 QNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNV 586
+ AG D VTY+ +M+ G +D+A+ + EM K P + +L++ + G +
Sbjct: 518 EAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGML 577
Query: 587 RKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLL 646
+ ML G+ PN T NSL+ + L A + + M + G+ P +TY L
Sbjct: 578 EDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENL 637
Query: 647 LSCCTEARSPYDMGFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDR 706
+ +AR+ + F + M G + S+ G + FLE D+
Sbjct: 638 VKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRK------KFLEAREVFDQ 691
Query: 707 ESKRGLV--DAVVDFLHKSGLK 726
+ GL + DF + K
Sbjct: 692 MRREGLAADKEIFDFFSDTKYK 713
Score = 143 bits (360), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 78/250 (31%), Positives = 133/250 (53%)
Query: 394 NVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMY 453
NV +YN +IH + + EA + M++ G PD ++Y T+++ + + G LD +
Sbjct: 245 NVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLI 304
Query: 454 KKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKA 513
+ M+ GL P+++ Y II L + L A + F EM+ QG +P+ V Y +I K
Sbjct: 305 EVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKR 364
Query: 514 RNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVY 573
+ ++A K + +M + PD +TY+ ++ G + EA +F EM K PD +
Sbjct: 365 GDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTF 424
Query: 574 GLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLN 633
L++ + KAG+++ A+ + M+QAG PNV T +L+ + G L A LL M
Sbjct: 425 TELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWK 484
Query: 634 LGLKPSLQTY 643
+GL+P++ TY
Sbjct: 485 IGLQPNIFTY 494
Score = 122 bits (307), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 79/280 (28%), Positives = 145/280 (51%), Gaps = 7/280 (2%)
Query: 370 LGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPD 429
LGR ++ + LL M G P+V++Y+ +++ Y R L++ + + M+ G +P+
Sbjct: 259 LGRIKE---AHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPN 315
Query: 430 RVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFC 489
Y ++I + + L A + + +M G+ PDT Y+ +I+ K G ++AA + F
Sbjct: 316 SYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFY 375
Query: 490 EMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHC- 548
EM ++ P+++TY +I+ + + A KL+ +M G EPD VT++ ++ G+C
Sbjct: 376 EMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELIN--GYCK 433
Query: 549 -GYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPT 607
G++ +A V M + P+ Y L+D K G++ A E M + GL+PN+ T
Sbjct: 434 AGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFT 493
Query: 608 CNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
NS+++ + G + +A L+ GL TYT L+
Sbjct: 494 YNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLM 533
Score = 105 bits (262), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 70/281 (24%), Positives = 135/281 (48%)
Query: 449 AMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIA 508
A+ ++++ G+ + +Y+++I+ + + G ++ AH L M +G P++++Y+ ++
Sbjct: 230 AIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVN 289
Query: 509 LQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVP 568
+ KL M+ G +P+ Y ++ +L L EAE F+EM R+ +P
Sbjct: 290 GYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILP 349
Query: 569 DEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLL 628
D VY L+D + K G++R A +++ M + P+V T +++S F ++G + +A L
Sbjct: 350 DTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLF 409
Query: 629 QGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGFCHELMAVSGHPAHMFLLSMPSPGPDGQ 688
M GL+P T+T L++ +A D H M +G ++ + G +
Sbjct: 410 HEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKE 469
Query: 689 NVRDHVGSFLEMMHSEDRESKRGLVDAVVDFLHKSGLKEEA 729
D L M + +++V+ L KSG EEA
Sbjct: 470 GDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEA 510
>sp|O82178|PP186_ARATH Pentatricopeptide repeat-containing protein At2g35130
OS=Arabidopsis thaliana GN=At2g35130 PE=2 SV=1
Length = 591
Score = 155 bits (391), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 92/355 (25%), Positives = 179/355 (50%), Gaps = 4/355 (1%)
Query: 297 VVESVSRILRQWKWGPLAEEALGNTNYSMDAYQANQVLKQLQDHTVALGFFNWLRRQAGF 356
++E +L + + ++ + +G T Y +AY ++K+ + A+ F ++R
Sbjct: 205 LIERAEVVLVEMQNHHVSPKTIGVTVY--NAY-IEGLMKRKGNTEEAIDVFQRMKRDRC- 260
Query: 357 KHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALD 416
K TY M+ + G+A + KL +M C+PN+ TY L++++ R +A +
Sbjct: 261 KPTTETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEE 320
Query: 417 VFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLG 476
+F+Q+Q G EPD Y L++ +++AG+ A +++ MQ G PD +Y+++++ G
Sbjct: 321 IFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYG 380
Query: 477 KAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKV 536
+AG A +F EM G P + ++ ++++ +KAR+ + ++M G EPD
Sbjct: 381 RAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTF 440
Query: 537 TYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAM 596
+ ++ + G G + E + AEM D Y +L++++GKAG + + E + +
Sbjct: 441 VLNSMLNLYGRLGQFTKMEKILAEMENGPCTADISTYNILINIYGKAGFLERIEELFVEL 500
Query: 597 LQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCT 651
+ RP+V T S + A+ R + + M++ G P T +LLS C+
Sbjct: 501 KEKNFRPDVVTWTSRIGAYSRKKLYVKCLEVFEEMIDSGCAPDGGTAKVLLSACS 555
Score = 140 bits (354), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 76/270 (28%), Positives = 135/270 (50%)
Query: 362 TYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQM 421
TYT +V R ++ +Q+ DG +P+V YN L+ SY RA Y A ++F M
Sbjct: 301 TYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLM 360
Query: 422 QVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHL 481
Q +GCEPDR +Y ++D + +AG A ++++M+ G++P ++ ++++ KA +
Sbjct: 361 QHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDV 420
Query: 482 QAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIV 541
+ EM G P+ N M+ L + + K+ +M+N D TY+I+
Sbjct: 421 TKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTADISTYNIL 480
Query: 542 MEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGL 601
+ + G G+L+ E +F E++ KN+ PD + + + + K E +E M+ +G
Sbjct: 481 INIYGKAGFLERIEELFVELKEKNFRPDVVTWTSRIGAYSRKKLYVKCLEVFEEMIDSGC 540
Query: 602 RPNVPTCNSLLSAFLRVGQLSDAYHLLQGM 631
P+ T LLSA Q+ +L+ M
Sbjct: 541 APDGGTAKVLLSACSSEEQVEQVTSVLRTM 570
Score = 133 bits (334), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 99/368 (26%), Positives = 174/368 (47%), Gaps = 22/368 (5%)
Query: 392 QPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMD 451
QP+V+ +N LI +YG+ EA ++ Q+ P TY LI + AG ++ A
Sbjct: 152 QPDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAYCMAGLIERAEV 211
Query: 452 MYKKMQAAGLSPDTFTYSV----IINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMI 507
+ +MQ +SP T +V I + + G+ + A +F M C P TYN+MI
Sbjct: 212 VLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTTETYNLMI 271
Query: 508 ALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWV 567
L KA + KLY +M++ +P+ TY+ ++ G ++AE +F +++
Sbjct: 272 NLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGLE 331
Query: 568 PDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHL 627
PD VY L++ + +AG A E + M G P+ + N ++ A+ R G SDA +
Sbjct: 332 PDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAV 391
Query: 628 LQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGFCHEL---MAVSGHPAHMFLLSMPSPG 684
+ M LG+ P+++++ LLLS ++AR D+ C + M+ +G F+L+
Sbjct: 392 FEEMKRLGIAPTMKSHMLLLSAYSKAR---DVTKCEAIVKEMSENGVEPDTFVLN----- 443
Query: 685 PDGQNVRDHVGSFLEM------MHSEDRESKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQ 738
N+ +G F +M M + + + +++ K+G E ++ +
Sbjct: 444 -SMLNLYGRLGQFTKMEKILAEMENGPCTADISTYNILINIYGKAGFLERIEELFVELKE 502
Query: 739 KNVYPDAV 746
KN PD V
Sbjct: 503 KNFRPDVV 510
Score = 74.3 bits (181), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 40/190 (21%), Positives = 85/190 (44%), Gaps = 1/190 (0%)
Query: 340 HTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYN 399
H+ A F ++R G ++ ++ +AR ++ +M +G +P+ N
Sbjct: 385 HSDAEAVFEEMKR-LGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLN 443
Query: 400 RLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAA 459
+++ YGR + + +M+ C D TY LI+I+ KAGFL+ +++ +++
Sbjct: 444 SMLNLYGRLGQFTKMEKILAEMENGPCTADISTYNILINIYGKAGFLERIEELFVELKEK 503
Query: 460 GLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSA 519
PD T++ I + ++F EM++ GC P+ T ++++ + +
Sbjct: 504 NFRPDVVTWTSRIGAYSRKKLYVKCLEVFEEMIDSGCAPDGGTAKVLLSACSSEEQVEQV 563
Query: 520 LKLYRDMQNA 529
+ R M
Sbjct: 564 TSVLRTMHKG 573
Score = 54.3 bits (129), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/136 (23%), Positives = 65/136 (47%), Gaps = 4/136 (2%)
Query: 526 MQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGN 585
++ + F+PD + ++++++ G EAE+++ ++ +VP E Y LL+ + AG
Sbjct: 146 LRKSSFQPDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAYCMAGL 205
Query: 586 VRKAWEWYEAMLQAGLRPN---VPTCNSLLSAFL-RVGQLSDAYHLLQGMLNLGLKPSLQ 641
+ +A M + P V N+ + + R G +A + Q M KP+ +
Sbjct: 206 IERAEVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTTE 265
Query: 642 TYTLLLSCCTEARSPY 657
TY L+++ +A Y
Sbjct: 266 TYNLMINLYGKASKSY 281
>sp|Q9CAN0|PPR99_ARATH Pentatricopeptide repeat-containing protein At1g63130,
mitochondrial OS=Arabidopsis thaliana GN=At1g63130 PE=2
SV=1
Length = 630
Score = 154 bits (390), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 107/399 (26%), Positives = 184/399 (46%)
Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
+ G++ D T +++ + L+ QMV G QP+ T+N LIH R N +
Sbjct: 144 KLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRAS 203
Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
EA+ + +M V GC+PD VTY +++ K G +D+A+ + KKM+ + P Y+ II
Sbjct: 204 EAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTII 263
Query: 473 NCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFE 532
+ L ++ A LF EM N+G PN+VTYN +I + A +L DM
Sbjct: 264 DALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKIN 323
Query: 533 PDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEW 592
P+ VT+S +++ G L EAE ++ EM +++ PD Y L++ + + +A
Sbjct: 324 PNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHM 383
Query: 593 YEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTE 652
+E M+ PNV T N+L+ F + ++ + L + M GL + TYT L+ +
Sbjct: 384 FELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQ 443
Query: 653 ARSPYDMGFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRESKRGL 712
AR + + M G + S+ G + E + E
Sbjct: 444 ARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYT 503
Query: 713 VDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAVKEKGM 751
+ +++ + K+G E+ ++ + K V P+ V M
Sbjct: 504 YNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTM 542
Score = 147 bits (371), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 92/323 (28%), Positives = 147/323 (45%), Gaps = 14/323 (4%)
Query: 363 YTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQ 422
Y T++ L + L +M G +PNVVTYN LI ++A + M
Sbjct: 259 YNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMI 318
Query: 423 VVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQ 482
P+ VT+ LID K G L A +Y +M + PD FTYS +IN L
Sbjct: 319 ERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLD 378
Query: 483 AAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVM 542
A +F M+++ C PN+VTYN +I KA+ ++L+R+M G + VTY+ ++
Sbjct: 379 EAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLI 438
Query: 543 EVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLR 602
D A+ VF +M +PD Y +L+D G V A +E + ++ +
Sbjct: 439 HGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKME 498
Query: 603 PNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGFC 662
P++ T N ++ + G++ D + L + G+KP++ TYT ++S GFC
Sbjct: 499 PDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMS-----------GFC 547
Query: 663 HELMAVSGHPAHMFLLSMPSPGP 685
+ + A M GP
Sbjct: 548 RKGLK---EEADALFREMKEEGP 567
Score = 143 bits (360), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 90/305 (29%), Positives = 155/305 (50%), Gaps = 1/305 (0%)
Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLI 402
AL F + + G + + TY +++ L ++ ++LL M+ PNVVT++ LI
Sbjct: 275 ALNLFTEMDNK-GIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALI 333
Query: 403 HSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLS 462
++ + L EA ++ +M +PD TY +LI+ LD A M++ M +
Sbjct: 334 DAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCF 393
Query: 463 PDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKL 522
P+ TY+ +I KA + +LF EM +G + N VTY +I +AR +A +
Sbjct: 394 PNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIV 453
Query: 523 YRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGK 582
++ M + G PD +TYSI+++ L + G ++ A VF ++R PD Y ++++ K
Sbjct: 454 FKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCK 513
Query: 583 AGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQT 642
AG V W+ + ++ G++PNV T +++S F R G +A L + M G P T
Sbjct: 514 AGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGT 573
Query: 643 YTLLL 647
Y L+
Sbjct: 574 YNTLI 578
Score = 131 bits (330), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 89/317 (28%), Positives = 155/317 (48%), Gaps = 15/317 (4%)
Query: 363 YTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQ 422
++ ++ + + +F + L +QM G N+ TY+ LI+ + R + L+ AL V +M
Sbjct: 84 FSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSILINCFCRRSQLSLALAVLAKMM 143
Query: 423 VVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQ 482
+G EPD VT +L++ + A+ + +M G PD+FT++ +I+ L +
Sbjct: 144 KLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRAS 203
Query: 483 AAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVM 542
A L MV +GC P+LVTY I++ K + AL L + M+ EP V Y+ ++
Sbjct: 204 EAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTII 263
Query: 543 EVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLR 602
+ L + +++A +F EM K P+ Y L+ G A M++ +
Sbjct: 264 DALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKIN 323
Query: 603 PNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGFC 662
PNV T ++L+ AF++ G+L +A L M+ + P + TY+ L++ GFC
Sbjct: 324 PNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLIN-----------GFC 372
Query: 663 -HELMAVSGHPAHMFLL 678
H+ + HMF L
Sbjct: 373 MHDRL---DEAKHMFEL 386
Score = 127 bits (318), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 73/270 (27%), Positives = 143/270 (52%)
Query: 362 TYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQM 421
T++ ++ + + KL D+M++ P++ TY+ LI+ + + L+EA +F+ M
Sbjct: 328 TFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELM 387
Query: 422 QVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHL 481
C P+ VTY TLI KA +D M+++++M GL +T TY+ +I+ +A
Sbjct: 388 ISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQAREC 447
Query: 482 QAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIV 541
A +F +MV+ G +P+++TY+I++ ++AL ++ +Q + EPD TY+I+
Sbjct: 448 DNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIM 507
Query: 542 MEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGL 601
+E + G +++ +F + K P+ Y ++ + + G +A + M + G
Sbjct: 508 IEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGP 567
Query: 602 RPNVPTCNSLLSAFLRVGQLSDAYHLLQGM 631
P+ T N+L+ A LR G + + L++ M
Sbjct: 568 LPDSGTYNTLIRAHLRDGDKAASAELIREM 597
Score = 124 bits (312), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 97/363 (26%), Positives = 162/363 (44%), Gaps = 15/363 (4%)
Query: 349 WLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRA 408
W+R +G ++D + + L + A+N L MV+ P++V +++L+ + +
Sbjct: 38 WVRDFSGVRYDYRKIS--INRLNDLKLDDAVN-LFGDMVKSRPFPSIVEFSKLLSAIAKM 94
Query: 409 NYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTY 468
N + + + +QMQ +G + TY LI+ + L +A+ + KM G PD T
Sbjct: 95 NKFDLVISLGEQMQNLGISHNLYTYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTL 154
Query: 469 SVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQN 528
+ ++N + A L +MV G P+ T+N +I + A+ L M
Sbjct: 155 NSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVV 214
Query: 529 AGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRK 588
G +PD VTY IV+ L G +D A ++ +M + P +Y ++D NV
Sbjct: 215 KGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVND 274
Query: 589 AWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
A + M G+RPNV T NSL+ G+ SDA LL M+ + P++ T++ L+
Sbjct: 275 ALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALID 334
Query: 649 C------CTEARSPYDMGFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMH 702
EA YD E++ S P +F S G + D E+M
Sbjct: 335 AFVKEGKLVEAEKLYD-----EMIKRSIDP-DIFTYSSLINGFCMHDRLDEAKHMFELMI 388
Query: 703 SED 705
S+D
Sbjct: 389 SKD 391
Score = 96.3 bits (238), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 105/202 (51%), Gaps = 1/202 (0%)
Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
Q G + TYTT++ +AR+ + QMV DG P+++TY+ L+ +
Sbjct: 424 QRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVE 483
Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
AL VF+ +Q EPD TY +I+ KAG ++ D++ + G+ P+ TY+ ++
Sbjct: 484 TALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMM 543
Query: 473 NCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFE 532
+ + G + A LF EM +G +P+ TYN +I + + ++ +L R+M++ F
Sbjct: 544 SGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCRFV 603
Query: 533 PDKVTYSIVMEVLGHCGYLDEA 554
D T +V +L H G LD++
Sbjct: 604 GDASTIGLVTNML-HDGRLDKS 624
>sp|Q9LPX2|PPR39_ARATH Pentatricopeptide repeat-containing protein At1g12775,
mitochondrial OS=Arabidopsis thaliana GN=At1g12775 PE=2
SV=1
Length = 644
Score = 154 bits (389), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 112/389 (28%), Positives = 190/389 (48%), Gaps = 15/389 (3%)
Query: 322 NYSMDAYQANQVLKQL-QDHTV--ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGA 378
N +DA + + ++ L +D ++ A FN + + GFK D TY T++G A ++
Sbjct: 258 NIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIK-GFKADIITYNTLIGGFCNAGRWDD 316
Query: 379 INKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLID 438
KLL M++ PNVVT++ LI S+ + L EA + K+M G P+ +TY +LID
Sbjct: 317 GAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLID 376
Query: 439 IHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIP 498
K L+ A+ M M + G PD T++++IN KA + +LF EM +G I
Sbjct: 377 GFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIA 436
Query: 499 NLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVF 558
N VTYN ++ ++ + A KL+++M + PD V+Y I+++ L G L++A +F
Sbjct: 437 NTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIF 496
Query: 559 AEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRV 618
++ + D +Y +++ A V AW+ + ++ G++ + N ++S R
Sbjct: 497 GKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRK 556
Query: 619 GQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGFCHELMAVSGHPAHM--- 675
LS A L + M G P TY +L+ E M SG PA +
Sbjct: 557 DSLSKADILFRKMTEEGHAPDELTYNILIRAHLGDDDATTAAELIEEMKSSGFPADVSTV 616
Query: 676 -FLLSMPSPGPDGQNVRDHVGSFLEMMHS 703
+++M S G + SFL+M+ +
Sbjct: 617 KMVINMLSSGELDK-------SFLDMLST 638
Score = 139 bits (349), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 83/311 (26%), Positives = 155/311 (49%), Gaps = 11/311 (3%)
Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
+ G++ D + T++ L + +L+D+MV G +P ++T N L++ ++
Sbjct: 151 KLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVS 210
Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
+A+ + +M G +P+ VTY ++++ K+G +AM++ +KM+ + D YS+II
Sbjct: 211 DAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIII 270
Query: 473 NCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFE 532
+ L K G L A LF EM +G +++TYN +I A + KL RDM
Sbjct: 271 DGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKIS 330
Query: 533 PDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEW 592
P+ VT+S++++ G L EA+ + EM ++ P+ Y L+D + K + +A +
Sbjct: 331 PNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQM 390
Query: 593 YEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTE 652
+ M+ G P++ T N L++ + + ++ D L + M G+ + TY L+
Sbjct: 391 VDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQ---- 446
Query: 653 ARSPYDMGFCH 663
GFC
Sbjct: 447 -------GFCQ 450
Score = 132 bits (333), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 73/294 (24%), Positives = 152/294 (51%)
Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
G H +T + M+ R R+ + ++++ G +P+ V +N L++ ++EA
Sbjct: 118 GIAHSIYTLSIMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEA 177
Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
L++ +M +G +P +T TL++ G + A+ + +M G P+ TY ++N
Sbjct: 178 LELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNV 237
Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPD 534
+ K+G A +L +M + + V Y+I+I K + +A L+ +M+ GF+ D
Sbjct: 238 MCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKAD 297
Query: 535 KVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYE 594
+TY+ ++ + G D+ + +M ++ P+ + +L+D + K G +R+A + +
Sbjct: 298 IITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLK 357
Query: 595 AMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
M+Q G+ PN T NSL+ F + +L +A ++ M++ G P + T+ +L++
Sbjct: 358 EMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILIN 411
Score = 127 bits (319), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 74/266 (27%), Positives = 136/266 (51%)
Query: 382 LLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHA 441
L+D+MV G QPN VTY +++ ++ A+++ ++M+ + D V Y +ID
Sbjct: 215 LIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLC 274
Query: 442 KAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLV 501
K G LD A +++ +M+ G D TY+ +I AG +L +M+ + PN+V
Sbjct: 275 KDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVV 334
Query: 502 TYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEM 561
T++++I K + A +L ++M G P+ +TY+ +++ L+EA + M
Sbjct: 335 TFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLM 394
Query: 562 RRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQL 621
K PD + +L++ + KA + E + M G+ N T N+L+ F + G+L
Sbjct: 395 ISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKL 454
Query: 622 SDAYHLLQGMLNLGLKPSLQTYTLLL 647
A L Q M++ ++P + +Y +LL
Sbjct: 455 EVAKKLFQEMVSRRVRPDIVSYKILL 480
Score = 127 bits (319), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 76/297 (25%), Positives = 151/297 (50%), Gaps = 4/297 (1%)
Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
+ GF+ +E TY ++ ++ ++ Q +LL +M + + V Y+ +I + L+
Sbjct: 221 ETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLD 280
Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
A ++F +M++ G + D +TY TLI AG D + + M +SP+ T+SV+I
Sbjct: 281 NAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLI 340
Query: 473 NCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFE 532
+ K G L+ A QL EM+ +G PN +TYN +I K + A+++ M + G +
Sbjct: 341 DSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCD 400
Query: 533 PDKVTYSIVMEVLGHC--GYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAW 590
PD +T++I++ G+C +D+ +F EM + + + Y LV + ++G + A
Sbjct: 401 PDIMTFNILIN--GYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAK 458
Query: 591 EWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
+ ++ M+ +RP++ + LL G+L A + + ++ + Y +++
Sbjct: 459 KLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIII 515
Score = 126 bits (317), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 83/321 (25%), Positives = 155/321 (48%), Gaps = 4/321 (1%)
Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
+ K D Y+ ++ L + L ++M G + +++TYN LI + A +
Sbjct: 256 ERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWD 315
Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
+ + + M P+ VT+ LID K G L A + K+M G++P+T TY+ +I
Sbjct: 316 DGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLI 375
Query: 473 NCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFE 532
+ K L+ A Q+ M+++GC P+++T+NI+I KA L+L+R+M G
Sbjct: 376 DGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVI 435
Query: 533 PDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEW 592
+ VTY+ +++ G L+ A+ +F EM + PD Y +L+D G + KA E
Sbjct: 436 ANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEI 495
Query: 593 YEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS--CC 650
+ + ++ + ++ ++ ++ DA+ L + G+K + Y +++S C
Sbjct: 496 FGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCR 555
Query: 651 TEARSPYDMGFCHELMAVSGH 671
++ S D+ F M GH
Sbjct: 556 KDSLSKADILF--RKMTEEGH 574
Score = 124 bits (312), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 99/394 (25%), Positives = 177/394 (44%), Gaps = 14/394 (3%)
Query: 363 YTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQ 422
+ + + + +Q+ + L QM G ++ T + +I+ + R L+ A ++
Sbjct: 91 FNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIMINCFCRCRKLSYAFSTMGKIM 150
Query: 423 VVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQ 482
+G EPD V + TL++ + A+++ +M G P T + ++N L G +
Sbjct: 151 KLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVS 210
Query: 483 AAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVM 542
A L MV G PN VTY ++ + K+ A++L R M+ + D V YSI++
Sbjct: 211 DAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIII 270
Query: 543 EVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLR 602
+ L G LD A +F EM K + D Y L+ + AG + M++ +
Sbjct: 271 DGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKIS 330
Query: 603 PNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTY-TLLLSCCTEARSPYDMGF 661
PNV T + L+ +F++ G+L +A LL+ M+ G+ P+ TY +L+ C E R +
Sbjct: 331 PNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQM 390
Query: 662 CHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRESKRGLV------DA 715
+++ P M + + + D + F EM S RG++ +
Sbjct: 391 VDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREM-------SLRGVIANTVTYNT 443
Query: 716 VVDFLHKSGLKEEAGSVWEVAAQKNVYPDAVKEK 749
+V +SG E A +++ + V PD V K
Sbjct: 444 LVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYK 477
Score = 105 bits (262), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 67/266 (25%), Positives = 119/266 (44%)
Query: 382 LLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHA 441
L M++ P V+ +NRL + + L + KQM+ G T +I+
Sbjct: 75 LFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIMINCFC 134
Query: 442 KAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLV 501
+ L A K+ G PDT ++ ++N L + A +L MV G P L+
Sbjct: 135 RCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLI 194
Query: 502 TYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEM 561
T N ++ A+ L M GF+P++VTY V+ V+ G A + +M
Sbjct: 195 TLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKM 254
Query: 562 RRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQL 621
+N D Y +++D K G++ A+ + M G + ++ T N+L+ F G+
Sbjct: 255 EERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRW 314
Query: 622 SDAYHLLQGMLNLGLKPSLQTYTLLL 647
D LL+ M+ + P++ T+++L+
Sbjct: 315 DDGAKLLRDMIKRKISPNVVTFSVLI 340
>sp|Q0WMY5|PP365_ARATH Pentatricopeptide repeat-containing protein At5g04810,
chloroplastic OS=Arabidopsis thaliana GN=PPR4 PE=1 SV=1
Length = 952
Score = 154 bits (388), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 85/319 (26%), Positives = 164/319 (51%)
Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
++ G KH+ TY+ M+ + + + + + MV++G +P+V+ YN +I ++ +
Sbjct: 511 KEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGMKPDVILYNNIISAFCGMGNM 570
Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
+ A+ K+MQ + P T+ +I +AK+G + +++++ M+ G P T++ +
Sbjct: 571 DRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGL 630
Query: 472 INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF 531
IN L + ++ A ++ EM G N TY ++ A + A + + +QN G
Sbjct: 631 INGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGL 690
Query: 532 EPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWE 591
+ D TY +++ G + A AV EM +N + VY +L+D W + G+V +A +
Sbjct: 691 DVDIFTYEALLKACCKSGRMQSALAVTKEMSARNIPRNSFVYNILIDGWARRGDVWEAAD 750
Query: 592 WYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCT 651
+ M + G++P++ T S +SA + G ++ A ++ M LG+KP+++TYT L+
Sbjct: 751 LIQQMKKEGVKPDIHTYTSFISACSKAGDMNRATQTIEEMEALGVKPNIKTYTTLIKGWA 810
Query: 652 EARSPYDMGFCHELMAVSG 670
A P C+E M G
Sbjct: 811 RASLPEKALSCYEEMKAMG 829
Score = 119 bits (298), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 69/259 (26%), Positives = 127/259 (49%), Gaps = 4/259 (1%)
Query: 392 QPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMD 451
+P+ + ++ YGR ++ A + F++M+ G P Y +LI +A +D A+
Sbjct: 306 KPSRTEFGLMVKFYGRRGDMHRARETFERMRARGITPTSRIYTSLIHAYAVGRDMDEALS 365
Query: 452 MYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQA 511
+KM+ G+ TYSVI+ KAGH +AA F E N Y +I
Sbjct: 366 CVRKMKEEGIEMSLVTYSVIVGGFSKAGHAEAADYWFDEAKRIHKTLNASIYGKIIYAHC 425
Query: 512 KARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEA--VFAEMRRKNWVPD 569
+ N + A L R+M+ G + Y +M+ G+ DE + VF ++ + P
Sbjct: 426 QTCNMERAEALVREMEEEGIDAPIAIYHTMMD--GYTMVADEKKGLVVFKRLKECGFTPT 483
Query: 570 EPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQ 629
YG L++L+ K G + KA E M + G++ N+ T + +++ F+++ ++A+ + +
Sbjct: 484 VVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFE 543
Query: 630 GMLNLGLKPSLQTYTLLLS 648
M+ G+KP + Y ++S
Sbjct: 544 DMVKEGMKPDVILYNNIIS 562
Score = 118 bits (296), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 69/296 (23%), Positives = 141/296 (47%)
Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
++ G + TY+ +VG +A A + D+ R N Y ++I+++ + +
Sbjct: 371 KEEGIEMSLVTYSVIVGGFSKAGHAEAADYWFDEAKRIHKTLNASIYGKIIYAHCQTCNM 430
Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
A + ++M+ G + Y T++D + + ++K+++ G +P TY +
Sbjct: 431 ERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKECGFTPTVVTYGCL 490
Query: 472 INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF 531
IN K G + A ++ M +G NL TY++MI K +++ +A ++ DM G
Sbjct: 491 INLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGM 550
Query: 532 EPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWE 591
+PD + Y+ ++ G +D A EM++ P + ++ + K+G++R++ E
Sbjct: 551 KPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSLE 610
Query: 592 WYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
++ M + G P V T N L++ + Q+ A +L M G+ + TYT ++
Sbjct: 611 VFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIM 666
Score = 117 bits (294), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 76/288 (26%), Positives = 133/288 (46%), Gaps = 5/288 (1%)
Query: 350 LRRQAGFKHDEHTYTTMVGILGRARQFGAINK---LLDQMVRDGCQPNVVTYNRLIHSYG 406
++ +H T T M I G A+ G + + + D M R GC P V T+N LI+
Sbjct: 577 VKEMQKLRHRPTTRTFMPIIHGYAKS-GDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLV 635
Query: 407 RANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTF 466
+ +A+++ +M + G + TY ++ +A G A + + ++Q GL D F
Sbjct: 636 EKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIF 695
Query: 467 TYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDM 526
TY ++ K+G +Q+A + EM + N YNI+I A+ + A L + M
Sbjct: 696 TYEALLKACCKSGRMQSALAVTKEMSARNIPRNSFVYNILIDGWARRGDVWEAADLIQQM 755
Query: 527 QNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNV 586
+ G +PD TY+ + G ++ A EM P+ Y L+ W +A
Sbjct: 756 KKEGVKPDIHTYTSFISACSKAGDMNRATQTIEEMEALGVKPNIKTYTTLIKGWARASLP 815
Query: 587 RKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNL 634
KA YE M G++P+ + LL++ L +++AY + G++ +
Sbjct: 816 EKALSCYEEMKAMGIKPDKAVYHCLLTSLLSRASIAEAY-IYSGVMTI 862
Score = 112 bits (281), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 74/287 (25%), Positives = 131/287 (45%), Gaps = 1/287 (0%)
Query: 382 LLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHA 441
L+ +M +G + Y+ ++ Y + L VFK+++ G P VTY LI+++
Sbjct: 436 LVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKECGFTPTVVTYGCLINLYT 495
Query: 442 KAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLV 501
K G + A+++ + M+ G+ + TYS++IN K A +F +MV +G P+++
Sbjct: 496 KVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGMKPDVI 555
Query: 502 TYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEM 561
YN +I+ N A++ ++MQ P T+ ++ G + + VF M
Sbjct: 556 LYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSLEVFDMM 615
Query: 562 RRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQL 621
RR VP + L++ + + KA E + M AG+ N T ++ + VG
Sbjct: 616 RRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGYASVGDT 675
Query: 622 SDAYHLLQGMLNLGLKPSLQTYTLLL-SCCTEARSPYDMGFCHELMA 667
A+ + N GL + TY LL +CC R + E+ A
Sbjct: 676 GKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEMSA 722
Score = 101 bits (251), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 64/285 (22%), Positives = 132/285 (46%)
Query: 363 YTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQ 422
+ MV GR + ++M G P Y LIH+Y ++EAL ++M+
Sbjct: 312 FGLMVKFYGRRGDMHRARETFERMRARGITPTSRIYTSLIHAYAVGRDMDEALSCVRKMK 371
Query: 423 VVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQ 482
G E VTY ++ +KAG + A + + + + + Y II + +++
Sbjct: 372 EEGIEMSLVTYSVIVGGFSKAGHAEAADYWFDEAKRIHKTLNASIYGKIIYAHCQTCNME 431
Query: 483 AAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVM 542
A L EM +G + Y+ M+ + + L +++ ++ GF P VTY ++
Sbjct: 432 RAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKECGFTPTVVTYGCLI 491
Query: 543 EVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLR 602
+ G + +A V M+ + + Y ++++ + K + A+ +E M++ G++
Sbjct: 492 NLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGMK 551
Query: 603 PNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
P+V N+++SAF +G + A ++ M L +P+ +T+ ++
Sbjct: 552 PDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPII 596
Score = 95.9 bits (237), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 69/262 (26%), Positives = 118/262 (45%), Gaps = 13/262 (4%)
Query: 286 PFSRHFASTGNVVES--VSRILRQWKWGPLAEEALGNTNYSMDAYQANQVLKQLQDHTVA 343
P +A +G++ S V ++R+ P G N ++ Q + ++ L + T+A
Sbjct: 594 PIIHGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLA 653
Query: 344 LGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIH 403
G +EHTYT ++ G + ++ +G ++ TY L+
Sbjct: 654 -----------GVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLK 702
Query: 404 SYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSP 463
+ ++ + AL V K+M + Y LID A+ G + A D+ ++M+ G+ P
Sbjct: 703 ACCKSGRMQSALAVTKEMSARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEGVKP 762
Query: 464 DTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLY 523
D TY+ I+ KAG + A Q EM G PN+ TY +I A+A + AL Y
Sbjct: 763 DIHTYTSFISACSKAGDMNRATQTIEEMEALGVKPNIKTYTTLIKGWARASLPEKALSCY 822
Query: 524 RDMQNAGFEPDKVTYSIVMEVL 545
+M+ G +PDK Y ++ L
Sbjct: 823 EEMKAMGIKPDKAVYHCLLTSL 844
>sp|P0C7Q7|PPR38_ARATH Putative pentatricopeptide repeat-containing protein At1g12700,
mitochondrial OS=Arabidopsis thaliana GN=At1g12700 PE=3
SV=1
Length = 602
Score = 154 bits (388), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 87/297 (29%), Positives = 158/297 (53%), Gaps = 4/297 (1%)
Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
+ G++ D T+ T++ L + L+D+MV +GCQP+VVTYN +++ R+ +
Sbjct: 151 KLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTS 210
Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
ALD+ ++M+ + D TY T+ID + G +D A+ ++K+M+ G+ TY+ ++
Sbjct: 211 LALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLV 270
Query: 473 NCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFE 532
L KAG L +MV++ +PN++T+N+++ + K Q A +LY++M G
Sbjct: 271 RGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGIS 330
Query: 533 PDKVTYSIVMEVLGHC--GYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAW 590
P+ +TY+ +M+ G+C L EA + M R PD + L+ + V
Sbjct: 331 PNIITYNTLMD--GYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGM 388
Query: 591 EWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
+ + + + GL N T + L+ F + G++ A L Q M++ G+ P + TY +LL
Sbjct: 389 KVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILL 445
Score = 135 bits (340), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 81/309 (26%), Positives = 154/309 (49%), Gaps = 11/309 (3%)
Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
G H+ +T M+ R + +L ++++ G +P+ T+N LI ++EA
Sbjct: 118 GIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEA 177
Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
+ + +M GC+PD VTY ++++ ++G +A+D+ +KM+ + D FTYS II+
Sbjct: 178 VVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDS 237
Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPD 534
L + G + AA LF EM +G ++VTYN ++ KA + L +DM + P+
Sbjct: 238 LCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPN 297
Query: 535 KVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYE 594
+T++++++V G L EA ++ EM + P+ Y L+D + + +A +
Sbjct: 298 VITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLD 357
Query: 595 AMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEAR 654
M++ P++ T SL+ + V ++ D + + + GL + TY++L+
Sbjct: 358 LMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQ------ 411
Query: 655 SPYDMGFCH 663
GFC
Sbjct: 412 -----GFCQ 415
Score = 133 bits (334), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 74/275 (26%), Positives = 144/275 (52%)
Query: 362 TYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQM 421
T+ ++ + + + N+L +M+ G PN++TYN L+ Y N L+EA ++ M
Sbjct: 300 TFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLM 359
Query: 422 QVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHL 481
C PD VT+ +LI + +D M +++ + GL + TYS+++ ++G +
Sbjct: 360 VRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKI 419
Query: 482 QAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIV 541
+ A +LF EMV+ G +P+++TY I++ + AL+++ D+Q + + V Y+ +
Sbjct: 420 KLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTI 479
Query: 542 MEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGL 601
+E + G +++A +F + K P+ Y +++ K G++ +A M + G
Sbjct: 480 IEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGN 539
Query: 602 RPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGL 636
PN T N+L+ A LR G L+ + L++ M + G
Sbjct: 540 APNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGF 574
Score = 129 bits (323), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 89/329 (27%), Positives = 164/329 (49%), Gaps = 4/329 (1%)
Query: 322 NYSMDAYQANQVLKQL-QDHTV--ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGA 378
N D + + ++ L +D + A+ F + + G K TY ++V L +A ++
Sbjct: 223 NVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETK-GIKSSVVTYNSLVRGLCKAGKWND 281
Query: 379 INKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLID 438
LL MV PNV+T+N L+ + + L EA +++K+M G P+ +TY TL+D
Sbjct: 282 GALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMD 341
Query: 439 IHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIP 498
+ L A +M M SPD T++ +I + ++F + +G +
Sbjct: 342 GYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVA 401
Query: 499 NLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVF 558
N VTY+I++ ++ + A +L+++M + G PD +TY I+++ L G L++A +F
Sbjct: 402 NAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIF 461
Query: 559 AEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRV 618
++++ +Y +++ K G V AW + ++ G++PNV T ++S +
Sbjct: 462 EDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKK 521
Query: 619 GQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
G LS+A LL+ M G P+ TY L+
Sbjct: 522 GSLSEANILLRKMEEDGNAPNDCTYNTLI 550
Score = 121 bits (303), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 72/278 (25%), Positives = 140/278 (50%)
Query: 370 LGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPD 429
+ R +QF + Q+ +G N+ T N +I+ + R A V ++ +G EPD
Sbjct: 98 IARTKQFNLVLDFCKQLELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPD 157
Query: 430 RVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFC 489
T+ TLI G + A+ + +M G PD TY+ I+N + ++G A L
Sbjct: 158 TTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLR 217
Query: 490 EMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCG 549
+M + ++ TY+ +I + +A+ L+++M+ G + VTY+ ++ L G
Sbjct: 218 KMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAG 277
Query: 550 YLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCN 609
++ + +M + VP+ + +L+D++ K G +++A E Y+ M+ G+ PN+ T N
Sbjct: 278 KWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYN 337
Query: 610 SLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
+L+ + +LS+A ++L M+ P + T+T L+
Sbjct: 338 TLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLI 375
Score = 120 bits (301), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 98/377 (25%), Positives = 162/377 (42%), Gaps = 24/377 (6%)
Query: 382 LLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHA 441
L +M+R P++V ++R + R N LD KQ+++ G + T +I+
Sbjct: 75 LFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMINCFC 134
Query: 442 KAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLV 501
+ A + K+ G PDT T++ +I L G + A L MV GC P++V
Sbjct: 135 RCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVV 194
Query: 502 TYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEM 561
TYN ++ ++ + AL L R M+ + D TYS +++ L G +D A ++F EM
Sbjct: 195 TYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEM 254
Query: 562 RRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQL 621
K Y LV KAG + M+ + PNV T N LL F++ G+L
Sbjct: 255 ETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKL 314
Query: 622 SDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGFCHELMAVSGHPAHMFLLSMP 681
+A L + M+ G+ P++ TY L+ G+C + +S + L+
Sbjct: 315 QEANELYKEMITRGISPNIITYNTLMD-----------GYCMQ-NRLSEANNMLDLMVRN 362
Query: 682 SPGPDGQNVRDHVGSFLEMMHSED------RESKRGLVDAVVDF------LHKSGLKEEA 729
PD + + + +D SKRGLV V + +SG + A
Sbjct: 363 KCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLA 422
Query: 730 GSVWEVAAQKNVYPDAV 746
+++ V PD +
Sbjct: 423 EELFQEMVSHGVLPDVM 439
Score = 107 bits (268), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 62/264 (23%), Positives = 127/264 (48%), Gaps = 1/264 (0%)
Query: 362 TYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQM 421
TY T++ + N +LD MVR+ C P++VT+ LI Y +++ + VF+ +
Sbjct: 335 TYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNI 394
Query: 422 QVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHL 481
G + VTY L+ ++G + +A +++++M + G+ PD TY ++++ L G L
Sbjct: 395 SKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKL 454
Query: 482 QAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIV 541
+ A ++F ++ +V Y +I K + A L+ + G +P+ +TY+++
Sbjct: 455 EKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVM 514
Query: 542 MEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGL 601
+ L G L EA + +M P++ Y L+ + G++ + + E M G
Sbjct: 515 ISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGF 574
Query: 602 RPNVPTCNSLLSAFLRVGQLSDAY 625
+ + ++ L G+L ++
Sbjct: 575 SADASSIKMVIDMLLS-GELDKSF 597
Score = 58.9 bits (141), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/236 (20%), Positives = 102/236 (43%), Gaps = 35/236 (14%)
Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
++A+ +F++M P V + A+ ++ +D K+++ G++ + +T +++
Sbjct: 70 DDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIM 129
Query: 472 INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF 531
INC FC C Y+++ +KL G+
Sbjct: 130 INC-------------FCR-----CCKTCFAYSVL----------GKVMKL-------GY 154
Query: 532 EPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWE 591
EPD T++ +++ L G + EA + M PD Y +V+ ++G+ A +
Sbjct: 155 EPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALD 214
Query: 592 WYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
M + ++ +V T ++++ + R G + A L + M G+K S+ TY L+
Sbjct: 215 LLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLV 270
Score = 43.9 bits (102), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 45/98 (45%), Gaps = 4/98 (4%)
Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
G K + TYT M+ L + N LL +M DG PN TYN LI ++ R L +
Sbjct: 503 GVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTAS 562
Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDI----HAKAGFLDV 448
+ ++M+ G D + +ID+ FLD+
Sbjct: 563 AKLIEEMKSCGFSADASSIKMVIDMLLSGELDKSFLDM 600
>sp|Q9SI78|PPR93_ARATH Pentatricopeptide repeat-containing protein At1g62720
OS=Arabidopsis thaliana GN=At1g62720 PE=2 SV=1
Length = 485
Score = 153 bits (387), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 93/317 (29%), Positives = 163/317 (51%), Gaps = 24/317 (7%)
Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAIN---KLLDQMVRDGCQPNVVTYNRLIHSYGRAN 409
+ GF+ D Y T I+ + + G +N +L D+M RDG + + VTYN L+ +
Sbjct: 167 EMGFRPDVVIYNT---IIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSG 223
Query: 410 YLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYS 469
++A + + M + P+ +T+ +ID+ K G AM +Y++M + PD FTY+
Sbjct: 224 RWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYN 283
Query: 470 VIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNA 529
+IN L G + A Q+ MV +GC+P++VTYN +I K++ KL+R+M
Sbjct: 284 SLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQR 343
Query: 530 GFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGN--VR 587
G D +TY+ +++ G D A+ +F+ M + P+ Y +L L+G N V
Sbjct: 344 GLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDSR---PNIRTYSIL--LYGLCMNWRVE 398
Query: 588 KAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
KA +E M ++ + ++ T N ++ ++G + DA+ L + + GLKP + +YT ++
Sbjct: 399 KALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMI 458
Query: 648 SCCTEARSPYDMGFCHE 664
S GFC +
Sbjct: 459 S-----------GFCRK 464
Score = 149 bits (376), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 82/294 (27%), Positives = 161/294 (54%), Gaps = 3/294 (1%)
Query: 354 AGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNE 413
G HD ++Y ++ L R +F ++ +M++ G +P+VVT + LI+ + + N + +
Sbjct: 98 CGIGHDLYSYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFD 157
Query: 414 ALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIIN 473
A+D+ +M+ +G PD V Y T+ID K G ++ A++++ +M+ G+ D TY+ ++
Sbjct: 158 AIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVA 217
Query: 474 CLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEP 533
L +G A +L +MV + +PN++T+ +I + K + A+KLY +M +P
Sbjct: 218 GLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDP 277
Query: 534 DKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWY 593
D TY+ ++ L G +DEA+ + M K +PD Y L++ + K+ V + + +
Sbjct: 278 DVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLF 337
Query: 594 EAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
M Q GL + T N+++ + + G+ A + M + +P+++TY++LL
Sbjct: 338 REMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDS---RPNIRTYSILL 388
Score = 118 bits (295), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 79/294 (26%), Positives = 140/294 (47%)
Query: 363 YTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQ 422
++ ++ + +++ + + L M G ++ +YN +I+ R + AL V +M
Sbjct: 72 FSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSVVGKMM 131
Query: 423 VVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQ 482
G EPD VT +LI+ + + A+D+ KM+ G PD Y+ II+ K G +
Sbjct: 132 KFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVN 191
Query: 483 AAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVM 542
A +LF M G + VTYN ++A + + A +L RDM P+ +T++ V+
Sbjct: 192 DAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVI 251
Query: 543 EVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLR 602
+V G EA ++ EM R+ PD Y L++ G V +A + + M+ G
Sbjct: 252 DVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCL 311
Query: 603 PNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSP 656
P+V T N+L++ F + ++ + L + M GL TY ++ +A P
Sbjct: 312 PDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRP 365
Score = 109 bits (272), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 67/267 (25%), Positives = 130/267 (48%)
Query: 382 LLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHA 441
L +M++ P++V +++++ ++ + + +F M+V G D +Y +I+
Sbjct: 56 LFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLC 115
Query: 442 KAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLV 501
+ +A+ + KM G PD T S +IN + + A L +M G P++V
Sbjct: 116 RCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVV 175
Query: 502 TYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEM 561
YN +I K A++L+ M+ G D VTY+ ++ L G +A + +M
Sbjct: 176 IYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDM 235
Query: 562 RRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQL 621
++ VP+ + ++D++ K G +A + YE M + + P+V T NSL++ G++
Sbjct: 236 VMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRV 295
Query: 622 SDAYHLLQGMLNLGLKPSLQTYTLLLS 648
+A +L M+ G P + TY L++
Sbjct: 296 DEAKQMLDLMVTKGCLPDVVTYNTLIN 322
Score = 90.5 bits (223), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 99/207 (47%), Gaps = 32/207 (15%)
Query: 359 DEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVF 418
D TY +++ L + ++LD MV GC P+VVTYN LI+ + ++ ++E +F
Sbjct: 278 DVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLF 337
Query: 419 KQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKM---------------------- 456
++M G D +TY T+I + +AG D A +++ +M
Sbjct: 338 REMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDSRPNIRTYSILLYGLCMNWRV 397
Query: 457 ----------QAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIM 506
Q + + D TY+++I+ + K G+++ A LF + +G P++V+Y M
Sbjct: 398 EKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTM 457
Query: 507 IALQAKARNYQSALKLYRDMQNAGFEP 533
I+ + R + + LYR MQ G P
Sbjct: 458 ISGFCRKRQWDKSDLLYRKMQEDGLLP 484
Score = 80.9 bits (198), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 88/174 (50%), Gaps = 2/174 (1%)
Query: 480 HLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYS 539
+L+ LFC+M+ +P++V ++ +++ AK++NY + L+ M+ G D +Y+
Sbjct: 49 NLEEEIDLFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYN 108
Query: 540 IVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQA 599
IV+ L C A +V +M + + PD L++ + + V A + M +
Sbjct: 109 IVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEM 168
Query: 600 GLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS--CCT 651
G RP+V N+++ ++G ++DA L M G++ TY L++ CC+
Sbjct: 169 GFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCS 222
Score = 80.5 bits (197), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 100/202 (49%)
Query: 446 LDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNI 505
L+ +D++ KM + P +S +++ + K+ + LF M G +L +YNI
Sbjct: 50 LEEEIDLFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNI 109
Query: 506 MIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKN 565
+I + + AL + M G+EPD VT S ++ + +A + ++M
Sbjct: 110 VINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMG 169
Query: 566 WVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAY 625
+ PD +Y ++D K G V A E ++ M + G+R + T NSL++ G+ SDA
Sbjct: 170 FRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAA 229
Query: 626 HLLQGMLNLGLKPSLQTYTLLL 647
L++ M+ + P++ T+T ++
Sbjct: 230 RLMRDMVMRDIVPNVITFTAVI 251
>sp|Q9LQ15|PPR95_ARATH Pentatricopeptide repeat-containing protein At1g62914,
mitochondrial OS=Arabidopsis thaliana GN=At1g62914 PE=2
SV=1
Length = 528
Score = 153 bits (386), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 89/295 (30%), Positives = 155/295 (52%)
Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
+ G+K D T+TT++ L + L+D+MV+ GCQP++VTY +++ + +
Sbjct: 176 EMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTD 235
Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
AL++ +M+ E + V Y T+ID K D A++++ +M+ G+ P+ TYS +I
Sbjct: 236 LALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLI 295
Query: 473 NCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFE 532
+CL G A +L +M+ + PNLVT++ +I K A KLY +M +
Sbjct: 296 SCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSID 355
Query: 533 PDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEW 592
P+ TYS ++ L EA+ + M RK+ +P+ Y L++ + KA V K E
Sbjct: 356 PNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMEL 415
Query: 593 YEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
+ M Q GL N T +L+ F + +A + + M+++G+ P++ TY +LL
Sbjct: 416 FREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILL 470
Score = 145 bits (365), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 94/322 (29%), Positives = 165/322 (51%), Gaps = 3/322 (0%)
Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
+ G++ D T +++ + L+DQMV G +P+ VT+ LIH N +
Sbjct: 141 KLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKAS 200
Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
EA+ + +M GC+PD VTY +++ K G D+A+++ KM+AA + + YS +I
Sbjct: 201 EAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVI 260
Query: 473 NCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFE 532
+ L K H A LF EM N+G PN++TY+ +I+ + A +L DM
Sbjct: 261 DSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKIN 320
Query: 533 PDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEW 592
P+ VT+S +++ G L +AE ++ EM +++ P+ Y L++ + + +A +
Sbjct: 321 PNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQM 380
Query: 593 YEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTE 652
E M++ PNV T N+L++ F + ++ L + M GL + TYT L+ +
Sbjct: 381 LELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQ 440
Query: 653 ARSPYD--MGFCHELMAVSGHP 672
AR + M F ++++V HP
Sbjct: 441 ARDCDNAQMVF-KQMVSVGVHP 461
Score = 143 bits (361), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 92/315 (29%), Positives = 161/315 (51%), Gaps = 7/315 (2%)
Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
G H+ +TY ++ R + LL +M++ G +P++VT N L++ + N +++A
Sbjct: 108 GISHNLYTYNILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDA 167
Query: 415 LDVFKQMQVVGCEPDRVTYCTLID---IHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
+ + QM +G +PD VT+ TLI +H KA A+ + +M G PD TY +
Sbjct: 168 VALVDQMVEMGYKPDTVTFTTLIHGLFLHNKAS---EAVALIDRMVQRGCQPDLVTYGAV 224
Query: 472 INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF 531
+N L K G A L +M N+V Y+ +I K R+ AL L+ +M+N G
Sbjct: 225 VNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGV 284
Query: 532 EPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWE 591
P+ +TYS ++ L + G +A + ++M + P+ + L+D + K G + KA +
Sbjct: 285 RPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEK 344
Query: 592 WYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTY-TLLLSCC 650
YE M++ + PN+ T +SL++ F + +L +A +L+ M+ P++ TY TL+ C
Sbjct: 345 LYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFC 404
Query: 651 TEARSPYDMGFCHEL 665
R M E+
Sbjct: 405 KAKRVDKGMELFREM 419
Score = 124 bits (311), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 82/285 (28%), Positives = 138/285 (48%), Gaps = 7/285 (2%)
Query: 339 DHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTY 398
D +AL N + A + + Y+T++ L + R L +M G +PNV+TY
Sbjct: 233 DTDLALNLLNKME-AAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITY 291
Query: 399 NRLIH---SYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKK 455
+ LI +YGR ++A + M P+ VT+ LID K G L A +Y++
Sbjct: 292 SSLISCLCNYGR---WSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEE 348
Query: 456 MQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARN 515
M + P+ FTYS +IN L A Q+ M+ + C+PN+VTYN +I KA+
Sbjct: 349 MIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKR 408
Query: 516 YQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGL 575
++L+R+M G + VTY+ ++ D A+ VF +M P+ Y +
Sbjct: 409 VDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNI 468
Query: 576 LVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQ 620
L+D K G + KA +E + ++ + P++ T N ++ + G+
Sbjct: 469 LLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGK 513
Score = 94.7 bits (234), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 67/255 (26%), Positives = 118/255 (46%)
Query: 393 PNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDM 452
P+++ +++L+ + + N + + ++M+++G + TY LI+ + L +A+ +
Sbjct: 76 PSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYNILINCFCRCSRLSLALAL 135
Query: 453 YKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAK 512
KM G PD T + ++N + A L +MV G P+ VT+ +I
Sbjct: 136 LGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFL 195
Query: 513 ARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPV 572
A+ L M G +PD VTY V+ L G D A + +M + +
Sbjct: 196 HNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVI 255
Query: 573 YGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGML 632
Y ++D K + A + M G+RPNV T +SL+S G+ SDA LL M+
Sbjct: 256 YSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMI 315
Query: 633 NLGLKPSLQTYTLLL 647
+ P+L T++ L+
Sbjct: 316 ERKINPNLVTFSALI 330
Score = 93.6 bits (231), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 66/245 (26%), Positives = 117/245 (47%), Gaps = 1/245 (0%)
Query: 411 LNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSV 470
L++A+ +F M P + + L+ AK D+ + +KM+ G+S + +TY++
Sbjct: 59 LDDAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYNI 118
Query: 471 IINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAG 530
+INC + L A L +M+ G P++VT N ++ A+ L M G
Sbjct: 119 LINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMG 178
Query: 531 FEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAW 590
++PD VT++ ++ L EA A+ M ++ PD YG +V+ K G+ A
Sbjct: 179 YKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLAL 238
Query: 591 EWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSC- 649
M A + NV ++++ + + DA +L M N G++P++ TY+ L+SC
Sbjct: 239 NLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCL 298
Query: 650 CTEAR 654
C R
Sbjct: 299 CNYGR 303
Score = 93.2 bits (230), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 50/156 (32%), Positives = 89/156 (57%)
Query: 362 TYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQM 421
TY++++ + G ++L+ M+R C PNVVTYN LI+ + +A +++ +++F++M
Sbjct: 360 TYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREM 419
Query: 422 QVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHL 481
G + VTY TLI +A D A ++K+M + G+ P+ TY+++++ L K G L
Sbjct: 420 SQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKL 479
Query: 482 QAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQ 517
A +F + P++ TYNIMI KA ++
Sbjct: 480 AKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKWK 515
>sp|Q0WKV3|PPR36_ARATH Pentatricopeptide repeat-containing protein At1g12300,
mitochondrial OS=Arabidopsis thaliana GN=At1g12300 PE=2
SV=1
Length = 637
Score = 153 bits (386), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 91/311 (29%), Positives = 158/311 (50%), Gaps = 11/311 (3%)
Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
+ G++ + T++T++ L + +L+D+MV G +P+++T N L++ +
Sbjct: 151 KLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEA 210
Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
EA+ + +M GC+P+ VTY ++++ K+G +AM++ +KM+ + D YS+II
Sbjct: 211 EAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIII 270
Query: 473 NCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFE 532
+ L K G L A LF EM +G N++TYNI+I A + KL RDM
Sbjct: 271 DGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKIN 330
Query: 533 PDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEW 592
P+ VT+S++++ G L EAE + EM + PD Y L+D + K ++ KA +
Sbjct: 331 PNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQM 390
Query: 593 YEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTE 652
+ M+ G PN+ T N L++ + + ++ D L + M G+ TY L+
Sbjct: 391 VDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQ---- 446
Query: 653 ARSPYDMGFCH 663
GFC
Sbjct: 447 -------GFCE 450
Score = 144 bits (362), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 84/295 (28%), Positives = 148/295 (50%)
Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
+ K D Y+ ++ L + L ++M G N++TYN LI + A +
Sbjct: 256 ERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWD 315
Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
+ + + M P+ VT+ LID K G L A +++K+M G++PDT TY+ +I
Sbjct: 316 DGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLI 375
Query: 473 NCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFE 532
+ K HL A+Q+ MV++GC PN+ T+NI+I KA L+L+R M G
Sbjct: 376 DGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVV 435
Query: 533 PDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEW 592
D VTY+ +++ G L+ A+ +F EM + P+ Y +L+D G KA E
Sbjct: 436 ADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEI 495
Query: 593 YEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
+E + ++ + ++ N ++ ++ DA+ L + G+KP ++TY +++
Sbjct: 496 FEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMI 550
Score = 141 bits (356), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 94/329 (28%), Positives = 163/329 (49%), Gaps = 4/329 (1%)
Query: 322 NYSMDAYQANQVLKQLQDHTV---ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGA 378
N +DA + + ++ L H A FN + + G + TY ++G A ++
Sbjct: 258 NIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMK-GITTNIITYNILIGGFCNAGRWDD 316
Query: 379 INKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLID 438
KLL M++ PNVVT++ LI S+ + L EA ++ K+M G PD +TY +LID
Sbjct: 317 GAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLID 376
Query: 439 IHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIP 498
K LD A M M + G P+ T++++IN KA + +LF +M +G +
Sbjct: 377 GFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVA 436
Query: 499 NLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVF 558
+ VTYN +I + A +L+++M + P+ VTY I+++ L G ++A +F
Sbjct: 437 DTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIF 496
Query: 559 AEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRV 618
++ + D +Y +++ A V AW+ + ++ G++P V T N ++ +
Sbjct: 497 EKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKK 556
Query: 619 GQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
G LS+A L + M G P TY +L+
Sbjct: 557 GPLSEAELLFRKMEEDGHAPDGWTYNILI 585
Score = 139 bits (351), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 81/295 (27%), Positives = 155/295 (52%)
Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
+ G K D T T+V L + + L+D+MV GCQPN VTY +++ ++
Sbjct: 186 EMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTA 245
Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
A+++ ++M+ + D V Y +ID K G LD A +++ +M+ G++ + TY+++I
Sbjct: 246 LAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILI 305
Query: 473 NCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFE 532
AG +L +M+ + PN+VT++++I K + A +L+++M + G
Sbjct: 306 GGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIA 365
Query: 533 PDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEW 592
PD +TY+ +++ +LD+A + M K P+ + +L++ + KA + E
Sbjct: 366 PDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLEL 425
Query: 593 YEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
+ M G+ + T N+L+ F +G+L+ A L Q M++ + P++ TY +LL
Sbjct: 426 FRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILL 480
Score = 130 bits (328), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 84/302 (27%), Positives = 146/302 (48%), Gaps = 11/302 (3%)
Query: 363 YTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQ 422
++ + + + +Q+ + L QM G N+ T + +I+ + R L A ++
Sbjct: 91 FSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMINCFCRCRKLCLAFSAMGKII 150
Query: 423 VVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQ 482
+G EP+ +T+ TLI+ G + A+++ +M G PD T + ++N L +G
Sbjct: 151 KLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEA 210
Query: 483 AAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVM 542
A L +MV GC PN VTY ++ + K+ A++L R M+ + D V YSI++
Sbjct: 211 EAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIII 270
Query: 543 EVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLR 602
+ L G LD A +F EM K + Y +L+ + AG + M++ +
Sbjct: 271 DGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKIN 330
Query: 603 PNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGFC 662
PNV T + L+ +F++ G+L +A L + M++ G+ P TYT L+ GFC
Sbjct: 331 PNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLID-----------GFC 379
Query: 663 HE 664
E
Sbjct: 380 KE 381
Score = 124 bits (310), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 75/271 (27%), Positives = 137/271 (50%), Gaps = 1/271 (0%)
Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
G D TYT+++ + N+++D MV GC PN+ T+N LI+ Y +AN +++
Sbjct: 363 GIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDG 422
Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
L++F++M + G D VTY TLI + G L+VA +++++M + + P+ TY ++++
Sbjct: 423 LELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDG 482
Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPD 534
L G + A ++F ++ ++ YNI+I A A L+ + G +P
Sbjct: 483 LCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPG 542
Query: 535 KVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYE 594
TY+I++ L G L EAE +F +M PD Y +L+ G+ K+ + E
Sbjct: 543 VKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIE 602
Query: 595 AMLQAGLRPNVPTCNSLLSAFLRVGQLSDAY 625
+ + G + T ++ L G+L ++
Sbjct: 603 ELKRCGFSVDASTIKMVID-MLSDGRLKKSF 632
Score = 65.1 bits (157), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 92/212 (43%), Gaps = 5/212 (2%)
Query: 436 LIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQG 495
L+DI A D A+D+++ M + P +S + + + K L +M +G
Sbjct: 64 LVDIKA-----DDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKG 118
Query: 496 CIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAE 555
NL T +IMI + R A + G+EP+ +T+S ++ L G + EA
Sbjct: 119 IAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEAL 178
Query: 556 AVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAF 615
+ M PD LV+ +G +A + M++ G +PN T +L+
Sbjct: 179 ELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVM 238
Query: 616 LRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
+ GQ + A LL+ M +K Y++++
Sbjct: 239 CKSGQTALAMELLRKMEERNIKLDAVKYSIII 270
Score = 50.1 bits (118), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 34/142 (23%), Positives = 72/142 (50%)
Query: 381 KLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIH 440
++ +++ + + ++ YN +IH A+ +++A D+F + + G +P TY +I
Sbjct: 494 EIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGL 553
Query: 441 AKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNL 500
K G L A +++KM+ G +PD +TY+++I G + +L E+ G +
Sbjct: 554 CKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELKRCGFSVDA 613
Query: 501 VTYNIMIALQAKARNYQSALKL 522
T ++I + + R +S L +
Sbjct: 614 STIKMVIDMLSDGRLKKSFLDM 635
Score = 46.6 bits (109), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/157 (20%), Positives = 69/157 (43%), Gaps = 1/157 (0%)
Query: 517 QSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLL 576
A+ L+RDM ++ P + +S + + D A+ +M K + ++
Sbjct: 70 DDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIM 129
Query: 577 VDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGL 636
++ + + + A+ +++ G PN T ++L++ G++S+A L+ M+ +G
Sbjct: 130 INCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGH 189
Query: 637 KPSLQTY-TLLLSCCTEARSPYDMGFCHELMAVSGHP 672
KP L T TL+ C + M +++ P
Sbjct: 190 KPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQP 226
Score = 33.1 bits (74), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 26/98 (26%), Positives = 43/98 (43%), Gaps = 4/98 (4%)
Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
G K TY M+G L + L +M DG P+ TYN LI ++ ++
Sbjct: 538 GVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKS 597
Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDI----HAKAGFLDV 448
+ + ++++ G D T +ID+ K FLD+
Sbjct: 598 VKLIEELKRCGFSVDASTIKMVIDMLSDGRLKKSFLDM 635
>sp|Q9FIX3|PP407_ARATH Pentatricopeptide repeat-containing protein At5g39710
OS=Arabidopsis thaliana GN=EMB2745 PE=2 SV=1
Length = 747
Score = 152 bits (385), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 113/396 (28%), Positives = 192/396 (48%), Gaps = 21/396 (5%)
Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
G+ DE TY T++ + F + +M+R G P+V+TY LIHS +A +N A
Sbjct: 305 GYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRA 364
Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
++ QM+V G P+ TY TL+D ++ G+++ A + ++M G SP TY+ +IN
Sbjct: 365 MEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALING 424
Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPD 534
G ++ A + +M +G P++V+Y+ +++ ++ + AL++ R+M G +PD
Sbjct: 425 HCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPD 484
Query: 535 KVTYSIVMEVLGHCGYLDEAEA--VFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEW 592
+TYS +++ G C EA ++ EM R PDE Y L++ + G++ KA +
Sbjct: 485 TITYSSLIQ--GFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQL 542
Query: 593 YEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCT- 651
+ M++ G+ P+V T + L++ + + +A LL + PS TY L+ C+
Sbjct: 543 HNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSN 602
Query: 652 -EARSPYDM--GFCHELMAVSGHPAHMFLLSMPSPGPDGQ--NVRDH----VGSFLEMMH 702
E +S + GFC + M +L + PDG N+ H G +
Sbjct: 603 IEFKSVVSLIKGFCMKGMMTEADQVFESMLG-KNHKPDGTAYNIMIHGHCRAGDIRKAYT 661
Query: 703 SEDRESKRGL------VDAVVDFLHKSGLKEEAGSV 732
K G V A+V LHK G E SV
Sbjct: 662 LYKEMVKSGFLLHTVTVIALVKALHKEGKVNELNSV 697
Score = 150 bits (378), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 87/289 (30%), Positives = 143/289 (49%), Gaps = 11/289 (3%)
Query: 374 RQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTY 433
R + +M+ PNV TYN LI + A ++ AL +F +M+ GC P+ VTY
Sbjct: 184 RNISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTY 243
Query: 434 CTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVN 493
TLID + K +D + + M GL P+ +Y+V+IN L + G ++ + EM
Sbjct: 244 NTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNR 303
Query: 494 QGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDE 553
+G + VTYN +I K N+ AL ++ +M G P +TY+ ++ + G ++
Sbjct: 304 RGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNR 363
Query: 554 AEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLS 613
A +MR + P+E Y LVD + + G + +A+ M G P+V T N+L++
Sbjct: 364 AMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALIN 423
Query: 614 AFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGFC 662
G++ DA +L+ M GL P + +Y+ +LS GFC
Sbjct: 424 GHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLS-----------GFC 461
Score = 149 bits (376), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 100/339 (29%), Positives = 162/339 (47%), Gaps = 24/339 (7%)
Query: 330 ANQVLKQLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAIN--------K 381
+N +LK D + L F NW F T + IL + + + K
Sbjct: 52 SNLLLKSQNDQALILKFLNWANPHQFFTLRCKCIT--LHILTKFKLYKTAQILAEDVAAK 109
Query: 382 LLD-----------QMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDR 430
LD Q D C ++ ++ SY R + +++AL + Q G P
Sbjct: 110 TLDDEYASLVFKSLQETYDLCYSTSSVFDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGV 169
Query: 431 VTYCTLID--IHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLF 488
++Y ++D I +K + A +++K+M + +SP+ FTY+++I AG++ A LF
Sbjct: 170 LSYNAVLDATIRSKRN-ISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLF 228
Query: 489 CEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHC 548
+M +GC+PN+VTYN +I K R KL R M G EP+ ++Y++V+ L
Sbjct: 229 DKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCRE 288
Query: 549 GYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTC 608
G + E V EM R+ + DE Y L+ + K GN +A + ML+ GL P+V T
Sbjct: 289 GRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITY 348
Query: 609 NSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
SL+ + + G ++ A L M GL P+ +TYT L+
Sbjct: 349 TSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLV 387
Score = 148 bits (374), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 104/362 (28%), Positives = 177/362 (48%), Gaps = 13/362 (3%)
Query: 289 RHFASTGNVVESVSRILRQWKWGPLAEEALGNTNYSMDAYQANQVLKQLQDHTVALGFFN 348
R F GN+ +++ + G L NT +D Y L+++ D F
Sbjct: 213 RGFCFAGNIDVALTLFDKMETKGCLPNVVTYNT--LIDGYCK---LRKIDDG------FK 261
Query: 349 WLRRQA--GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYG 406
LR A G + + +Y ++ L R + ++ +L +M R G + VTYN LI Y
Sbjct: 262 LLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYC 321
Query: 407 RANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTF 466
+ ++AL + +M G P +TY +LI KAG ++ AM+ +M+ GL P+
Sbjct: 322 KEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNER 381
Query: 467 TYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDM 526
TY+ +++ + G++ A+++ EM + G P++VTYN +I + A+ + DM
Sbjct: 382 TYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDM 441
Query: 527 QNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNV 586
+ G PD V+YS V+ +DEA V EM K PD Y L+ + +
Sbjct: 442 KEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRT 501
Query: 587 RKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLL 646
++A + YE ML+ GL P+ T +L++A+ G L A L M+ G+ P + TY++L
Sbjct: 502 KEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVL 561
Query: 647 LS 648
++
Sbjct: 562 IN 563
Score = 145 bits (366), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 117/423 (27%), Positives = 197/423 (46%), Gaps = 24/423 (5%)
Query: 342 VALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRL 401
VAL F+ + + G + TY T++ + R+ KLL M G +PN+++YN +
Sbjct: 223 VALTLFDKMETK-GCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVV 281
Query: 402 IHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGL 461
I+ R + E V +M G D VTY TLI + K G A+ M+ +M GL
Sbjct: 282 INGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGL 341
Query: 462 SPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALK 521
+P TY+ +I+ + KAG++ A + +M +G PN TY ++ ++ A +
Sbjct: 342 TPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYR 401
Query: 522 LYRDMQNAGFEPDKVTYSIVMEVLGHC--GYLDEAEAVFAEMRRKNWVPDEPVYGLLVDL 579
+ R+M + GF P VTY+ ++ GHC G +++A AV +M+ K PD Y ++
Sbjct: 402 VLREMNDNGFSPSVVTYNALIN--GHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSG 459
Query: 580 WGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPS 639
+ ++ +V +A M++ G++P+ T +SL+ F + +A L + ML +GL P
Sbjct: 460 FCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPD 519
Query: 640 LQTYTLLLSC-CTEARSPYDMGFCHELMAVSGHPAHMFLLSMPSPGPDGQN-VRDHVGSF 697
TYT L++ C E + H M G + S+ G + Q+ R+
Sbjct: 520 EFTYTALINAYCMEGDLEKALQL-HNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLL 578
Query: 698 LEMMHSEDRESK---------------RGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVY 742
L++ + E S + +V + F K G+ EA V+E KN
Sbjct: 579 LKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMK-GMMTEADQVFESMLGKNHK 637
Query: 743 PDA 745
PD
Sbjct: 638 PDG 640
Score = 133 bits (335), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 94/331 (28%), Positives = 157/331 (47%), Gaps = 51/331 (15%)
Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLI 402
A+ F + +R + G +E TYTT+V + ++L +M +G P+VVTYN LI
Sbjct: 364 AMEFLDQMRVR-GLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALI 422
Query: 403 H-----------------------------------SYGRANYLNEALDVFKQMQVVGCE 427
+ + R+ ++EAL V ++M G +
Sbjct: 423 NGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIK 482
Query: 428 PDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQL 487
PD +TY +LI + A D+Y++M GL PD FTY+ +IN G L+ A QL
Sbjct: 483 PDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQL 542
Query: 488 FCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVME---- 543
EMV +G +P++VTY+++I K + A +L + P VTY ++E
Sbjct: 543 HNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSN 602
Query: 544 ---------VLGHC--GYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEW 592
+ G C G + EA+ VF M KN PD Y +++ +AG++RKA+
Sbjct: 603 IEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTL 662
Query: 593 YEAMLQAGLRPNVPTCNSLLSAFLRVGQLSD 623
Y+ M+++G + T +L+ A + G++++
Sbjct: 663 YKEMVKSGFLLHTVTVIALVKALHKEGKVNE 693
Score = 102 bits (254), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 73/303 (24%), Positives = 128/303 (42%), Gaps = 50/303 (16%)
Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
++ G D +Y+T++ R+ ++ +MV G +P+ +TY+ LI +
Sbjct: 442 KEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRT 501
Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
EA D++++M VG PD TY LI+ + G L+ A+ ++ +M G+ PD TYSV+
Sbjct: 502 KEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVL 561
Query: 472 INCLGK--------------------------------------------------AGHL 481
IN L K G +
Sbjct: 562 INGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMM 621
Query: 482 QAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIV 541
A Q+F M+ + P+ YNIMI +A + + A LY++M +GF VT +
Sbjct: 622 TEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFLLHTVTVIAL 681
Query: 542 MEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGL 601
++ L G ++E +V + R + + +LV++ + GN+ + M + G
Sbjct: 682 VKALHKEGKVNELNSVIVHVLRSCELSEAEQAKVLVEINHREGNMDVVLDVLAEMAKDGF 741
Query: 602 RPN 604
PN
Sbjct: 742 LPN 744
Score = 51.6 bits (122), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/200 (20%), Positives = 82/200 (41%), Gaps = 15/200 (7%)
Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANY-- 410
+ G D TY+ ++ L + + +LL ++ + P+ VTY+ LI + +
Sbjct: 548 EKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKS 607
Query: 411 -------------LNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQ 457
+ EA VF+ M +PD Y +I H +AG + A +YK+M
Sbjct: 608 VVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMV 667
Query: 458 AAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQ 517
+G T T ++ L K G + + + ++ + +++ + + N
Sbjct: 668 KSGFLLHTVTVIALVKALHKEGKVNELNSVIVHVLRSCELSEAEQAKVLVEINHREGNMD 727
Query: 518 SALKLYRDMQNAGFEPDKVT 537
L + +M GF P+ ++
Sbjct: 728 VVLDVLAEMAKDGFLPNGIS 747
>sp|Q9C6S6|PPR67_ARATH Putative pentatricopeptide repeat-containing protein At1g31840
OS=Arabidopsis thaliana GN=At1g31840 PE=2 SV=2
Length = 840
Score = 152 bits (384), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 106/402 (26%), Positives = 187/402 (46%), Gaps = 6/402 (1%)
Query: 375 QFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYC 434
Q ++LL ++ G PNVVT+ LI+ + + ++ A D+FK M+ G EPD + Y
Sbjct: 266 QIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYS 325
Query: 435 TLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQ 494
TLID + KAG L + ++ + G+ D +S I+ K+G L A ++ M+ Q
Sbjct: 326 TLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQ 385
Query: 495 GCIPNLVTYNIMI-ALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDE 553
G PN+VTY I+I L R Y+ A +Y + G EP VTYS +++ CG L
Sbjct: 386 GISPNVVTYTILIKGLCQDGRIYE-AFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRS 444
Query: 554 AEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLS 613
A++ +M + + PD +YG+LVD K G + A + ML +R NV NSL+
Sbjct: 445 GFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLID 504
Query: 614 AFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSC-CTEARSPYDMGFCHELMAVSGHP 672
+ R+ + +A + + M G+KP + T+T ++ E R + + + P
Sbjct: 505 GWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEP 564
Query: 673 AHMFLLSMPSPGPDGQNVRDHVG-SFLEMMHSEDRESKRGLVDAVVDFLHKSGLKEEAGS 731
+ ++ ++++ +G ++M + + + V+ L K E+A
Sbjct: 565 DALAYCTLIDAFC--KHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASK 622
Query: 732 VWEVAAQKNVYPDAVKEKGMSYWLINLHVMSDGTAVIALSRT 773
+ + + PD V M +L + + + L +
Sbjct: 623 FFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKV 664
Score = 131 bits (330), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 98/406 (24%), Positives = 176/406 (43%), Gaps = 3/406 (0%)
Query: 344 LGFFNWLRRQA---GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNR 400
LG + L QA G K D +++ + + ++ + + +M+ G PNVVTY
Sbjct: 337 LGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTI 396
Query: 401 LIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAG 460
LI + + EA ++ Q+ G EP VTY +LID K G L +Y+ M G
Sbjct: 397 LIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMG 456
Query: 461 LSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSAL 520
PD Y V+++ L K G + A + +M+ Q N+V +N +I + + AL
Sbjct: 457 YPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEAL 516
Query: 521 KLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLW 580
K++R M G +PD T++ VM V G L+EA +F M + PD Y L+D +
Sbjct: 517 KVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAF 576
Query: 581 GKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSL 640
K + ++ M + + ++ CN ++ + ++ DA ++ ++P +
Sbjct: 577 CKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDI 636
Query: 641 QTYTLLLSCCTEARSPYDMGFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEM 700
TY ++ R + EL+ V+ + L++ N D +
Sbjct: 637 VTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSI 696
Query: 701 MHSEDRESKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAV 746
M + + ++D+ KS E + ++E +K + P V
Sbjct: 697 MAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIV 742
Score = 124 bits (311), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 72/276 (26%), Positives = 139/276 (50%)
Query: 372 RARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRV 431
R +F K+ M G +P+V T+ ++ L EAL +F +M +G EPD +
Sbjct: 508 RLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDAL 567
Query: 432 TYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEM 491
YCTLID K + + ++ MQ +S D +V+I+ L K ++ A + F +
Sbjct: 568 AYCTLIDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNL 627
Query: 492 VNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYL 551
+ P++VTYN MI R A +++ ++ F P+ VT +I++ VL +
Sbjct: 628 IEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDM 687
Query: 552 DEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSL 611
D A +F+ M K P+ YG L+D + K+ ++ +++ +E M + G+ P++ + + +
Sbjct: 688 DGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSII 747
Query: 612 LSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
+ + G++ +A ++ ++ L P + Y +L+
Sbjct: 748 IDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILI 783
Score = 118 bits (296), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 70/259 (27%), Positives = 129/259 (49%)
Query: 346 FFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSY 405
F + + G + D Y T++ + + +L D M R+ ++ N +IH
Sbjct: 552 FLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLL 611
Query: 406 GRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDT 465
+ + + +A F + EPD VTY T+I + LD A +++ ++ P+T
Sbjct: 612 FKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNT 671
Query: 466 FTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRD 525
T +++I+ L K + A ++F M +G PN VTY ++ +K+ + + + KL+ +
Sbjct: 672 VTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEE 731
Query: 526 MQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGN 585
MQ G P V+YSI+++ L G +DEA +F + +PD Y +L+ + K G
Sbjct: 732 MQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGR 791
Query: 586 VRKAWEWYEAMLQAGLRPN 604
+ +A YE ML+ G++P+
Sbjct: 792 LVEAALLYEHMLRNGVKPD 810
Score = 102 bits (254), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 78/316 (24%), Positives = 144/316 (45%), Gaps = 22/316 (6%)
Query: 266 CVSERFSKPSREMKIPA--GLAPFSRHFAST-------GNVVESVSRILRQWKWGPLAEE 316
C RF + + ++ G+ P F + G + E++ R +K G L +
Sbjct: 507 CRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMG-LEPD 565
Query: 317 ALGNTNYSMDAYQANQVLKQLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQF 376
AL +DA+ + T+ L F+ ++R D ++ +L + +
Sbjct: 566 ALAYCTL-IDAFCKHM------KPTIGLQLFDLMQRNK-ISADIAVCNVVIHLLFKCHRI 617
Query: 377 GAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTL 436
+K + ++ +P++VTYN +I Y L+EA +F+ ++V P+ VT L
Sbjct: 618 EDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTIL 677
Query: 437 IDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGC 496
I + K +D A+ M+ M G P+ TY +++ K+ ++ + +LF EM +G
Sbjct: 678 IHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGI 737
Query: 497 IPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHC--GYLDEA 554
P++V+Y+I+I K A ++ +A PD V Y+I++ G+C G L EA
Sbjct: 738 SPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIR--GYCKVGRLVEA 795
Query: 555 EAVFAEMRRKNWVPDE 570
++ M R PD+
Sbjct: 796 ALLYEHMLRNGVKPDD 811
Score = 89.7 bits (221), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 56/191 (29%), Positives = 96/191 (50%), Gaps = 1/191 (0%)
Query: 346 FFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSY 405
FFN L + + D TY TM+ R+ ++ + + PN VT LIH
Sbjct: 623 FFNNLI-EGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVL 681
Query: 406 GRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDT 465
+ N ++ A+ +F M G +P+ VTY L+D +K+ ++ + ++++MQ G+SP
Sbjct: 682 CKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSI 741
Query: 466 FTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRD 525
+YS+II+ L K G + A +F + ++ +P++V Y I+I K A LY
Sbjct: 742 VSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEH 801
Query: 526 MQNAGFEPDKV 536
M G +PD +
Sbjct: 802 MLRNGVKPDDL 812
Score = 42.4 bits (98), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 51/250 (20%), Positives = 95/250 (38%), Gaps = 52/250 (20%)
Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKM------------QAA 459
N AL F+ ++ G +P ++ T+ + + G DVA ++ +M
Sbjct: 84 NSALKYFRWAEISGKDP---SFYTIAHVLIRNGMFDVADKVFDEMITNRGKDFNVLGSIR 140
Query: 460 GLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGC-IPNLVTYNIMIALQAKARNYQS 518
S D ++ C + G + A ++F G IP Y ++ +L R
Sbjct: 141 DRSLDADVCKFLMECCCRYGMVDKALEIFVYSTQLGVVIPQDSVYRMLNSLIGSDRVDLI 200
Query: 519 ALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVD 578
A + + G EP V+ +G ++D
Sbjct: 201 A-DHFDKLCRGGIEPSGVS----------------------------------AHGFVLD 225
Query: 579 LWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKP 638
G V KA +++ +++ G R + +CN +L L V Q+ A LL +L+ G P
Sbjct: 226 ALFCKGEVTKALDFHRLVMERGFRVGIVSCNKVLKG-LSVDQIEVASRLLSLVLDCGPAP 284
Query: 639 SLQTYTLLLS 648
++ T+ L++
Sbjct: 285 NVVTFCTLIN 294
>sp|Q9LQ14|PPR96_ARATH Pentatricopeptide repeat-containing protein At1g62930,
chloroplastic OS=Arabidopsis thaliana GN=At1g62930 PE=2
SV=2
Length = 629
Score = 152 bits (384), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 97/329 (29%), Positives = 159/329 (48%), Gaps = 18/329 (5%)
Query: 339 DHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTY 398
D +AL + + + D YTT++ L + L +M G +PNVVTY
Sbjct: 235 DIDLALSLLKKMEK-GKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTY 293
Query: 399 NRLIH---SYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKK 455
N LI +YGR ++A + M P+ VT+ LID K G L A +Y +
Sbjct: 294 NSLIRCLCNYGR---WSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDE 350
Query: 456 MQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARN 515
M + PD FTYS +IN L A +F M+++ C PN+VTYN +I KA+
Sbjct: 351 MIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKR 410
Query: 516 YQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGL 575
+ ++L+R+M G + VTY+ +++ L G D A+ +F +M PD Y +
Sbjct: 411 VEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSI 470
Query: 576 LVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLG 635
L+D K G + KA +E + ++ + P++ T N ++ + G++ D + L + G
Sbjct: 471 LLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKG 530
Query: 636 LKPSLQTYTLLLSCCTEARSPYDMGFCHE 664
+KP++ YT ++S GFC +
Sbjct: 531 VKPNVIIYTTMIS-----------GFCRK 548
Score = 147 bits (371), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 111/434 (25%), Positives = 195/434 (44%), Gaps = 4/434 (0%)
Query: 316 EALGNTNYSMDAYQANQVLKQLQDHT---VALGFFNWLRRQAGFKHDEHTYTTMVGILGR 372
E + N S D Y N ++ + +AL + + G++ D T ++++
Sbjct: 104 ERMQNLRISYDLYSYNILINCFCRRSQLPLALAVLGKMMK-LGYEPDIVTLSSLLNGYCH 162
Query: 373 ARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVT 432
++ L+DQM QPN VT+N LIH N +EA+ + +M GC+PD T
Sbjct: 163 GKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFT 222
Query: 433 YCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMV 492
Y T+++ K G +D+A+ + KKM+ + D Y+ II+ L ++ A LF EM
Sbjct: 223 YGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMD 282
Query: 493 NQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLD 552
N+G PN+VTYN +I + A +L DM P+ VT+S +++ G L
Sbjct: 283 NKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLV 342
Query: 553 EAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLL 612
EAE ++ EM +++ PD Y L++ + + +A +E M+ PNV T N+L+
Sbjct: 343 EAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLI 402
Query: 613 SAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGFCHELMAVSGHP 672
F + ++ + L + M GL + TY L+ +A + M G P
Sbjct: 403 KGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVP 462
Query: 673 AHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRESKRGLVDAVVDFLHKSGLKEEAGSV 732
+ S+ G + E + E + +++ + K+G E+ +
Sbjct: 463 PDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDL 522
Query: 733 WEVAAQKNVYPDAV 746
+ + K V P+ +
Sbjct: 523 FCSLSLKGVKPNVI 536
Score = 146 bits (368), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 90/305 (29%), Positives = 157/305 (51%), Gaps = 1/305 (0%)
Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLI 402
AL F + + G + + TY +++ L ++ ++LL M+ PNVVT++ LI
Sbjct: 274 ALNLFTEMDNK-GIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALI 332
Query: 403 HSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLS 462
++ + L EA ++ +M +PD TY +LI+ LD A M++ M +
Sbjct: 333 DAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCF 392
Query: 463 PDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKL 522
P+ TY+ +I KA ++ +LF EM +G + N VTYN +I +A + A K+
Sbjct: 393 PNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKI 452
Query: 523 YRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGK 582
++ M + G PD +TYSI+++ L G L++A VF +++ PD Y ++++ K
Sbjct: 453 FKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCK 512
Query: 583 AGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQT 642
AG V W+ + ++ G++PNV +++S F R G +A L + M G P+ T
Sbjct: 513 AGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGT 572
Query: 643 YTLLL 647
Y L+
Sbjct: 573 YNTLI 577
Score = 136 bits (343), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 79/293 (26%), Positives = 155/293 (52%)
Query: 362 TYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQM 421
T++ ++ + + KL D+M++ P++ TY+ LI+ + + L+EA +F+ M
Sbjct: 327 TFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELM 386
Query: 422 QVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHL 481
C P+ VTY TLI KA ++ M+++++M GL +T TY+ +I L +AG
Sbjct: 387 ISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDC 446
Query: 482 QAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIV 541
A ++F +MV+ G P+++TY+I++ K + AL ++ +Q + EPD TY+I+
Sbjct: 447 DMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIM 506
Query: 542 MEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGL 601
+E + G +++ +F + K P+ +Y ++ + + G +A + M + G
Sbjct: 507 IEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGT 566
Query: 602 RPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEAR 654
PN T N+L+ A LR G + + L++ M + G T +++++ + R
Sbjct: 567 LPNSGTYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVINMLHDGR 619
Score = 127 bits (319), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 77/267 (28%), Positives = 134/267 (50%), Gaps = 1/267 (0%)
Query: 359 DEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVF 418
D TY++++ + + + M+ C PNVVTYN LI + +A + E +++F
Sbjct: 359 DIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELF 418
Query: 419 KQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKA 478
++M G + VTY TLI +AG D+A ++KKM + G+ PD TYS++++ L K
Sbjct: 419 REMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKY 478
Query: 479 GHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTY 538
G L+ A +F + P++ TYNIMI KA + L+ + G +P+ + Y
Sbjct: 479 GKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIY 538
Query: 539 SIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQ 598
+ ++ G +EA+A+F EM+ +P+ Y L+ + G+ + E + M
Sbjct: 539 TTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEMRS 598
Query: 599 AGLRPNVPTCNSLLSAFLRVGQLSDAY 625
G + T S++ L G+L +Y
Sbjct: 599 CGFVGDASTI-SMVINMLHDGRLEKSY 624
Score = 115 bits (289), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 99/398 (24%), Positives = 179/398 (44%), Gaps = 28/398 (7%)
Query: 363 YTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQ 422
+ ++ + + +F + L ++M ++ +YN LI+ + R + L AL V +M
Sbjct: 83 FNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNILINCFCRRSQLPLALAVLGKMM 142
Query: 423 VVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQ 482
+G EPD VT +L++ + + A+ + +M P+T T++ +I+ L
Sbjct: 143 KLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKAS 202
Query: 483 AAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVM 542
A L MV +GC P+L TY ++ K + AL L + M+ E D V Y+ ++
Sbjct: 203 EAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTII 262
Query: 543 EVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLR 602
+ L + +++A +F EM K P+ Y L+ G A M++ +
Sbjct: 263 DALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKIN 322
Query: 603 PNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGFC 662
PNV T ++L+ AF++ G+L +A L M+ + P + TY+ L++ GFC
Sbjct: 323 PNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLIN-----------GFC 371
Query: 663 -HELMAVSGHPAHMFLLSMPSPG-PDGQNVRDHVGSFLEMMHSED-----RE-SKRGLVD 714
H+ + HMF L + P+ + F + E+ RE S+RGLV
Sbjct: 372 MHDRL---DEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVG 428
Query: 715 AVVDF------LHKSGLKEEAGSVWEVAAQKNVYPDAV 746
V + L ++G + A +++ V PD +
Sbjct: 429 NTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDII 466
Score = 108 bits (269), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 88/330 (26%), Positives = 143/330 (43%), Gaps = 12/330 (3%)
Query: 382 LLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHA 441
L +MV+ P++V +N+L+ + + N + + + ++MQ + D +Y LI+
Sbjct: 67 LFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNILINCFC 126
Query: 442 KAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLV 501
+ L +A+ + KM G PD T S ++N + A L +M PN V
Sbjct: 127 RRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTV 186
Query: 502 TYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEM 561
T+N +I A+ L M G +PD TY V+ L G +D A ++ +M
Sbjct: 187 TFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKM 246
Query: 562 RRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQL 621
+ D +Y ++D NV A + M G+RPNV T NSL+ G+
Sbjct: 247 EKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRW 306
Query: 622 SDAYHLLQGMLNLGLKPSLQTYTLLLSC------CTEARSPYDMGFCHELMAVSGHPAHM 675
SDA LL M+ + P++ T++ L+ EA YD E++ S P +
Sbjct: 307 SDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYD-----EMIKRSIDP-DI 360
Query: 676 FLLSMPSPGPDGQNVRDHVGSFLEMMHSED 705
F S G + D E+M S+D
Sbjct: 361 FTYSSLINGFCMHDRLDEAKHMFELMISKD 390
Score = 101 bits (251), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 108/202 (53%), Gaps = 1/202 (0%)
Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
Q G + TY T++ L +A K+ +MV DG P+++TY+ L+ + L
Sbjct: 423 QRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLE 482
Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
+AL VF+ +Q EPD TY +I+ KAG ++ D++ + G+ P+ Y+ +I
Sbjct: 483 KALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMI 542
Query: 473 NCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFE 532
+ + G + A LF EM G +PN TYN +I + + + ++ +L ++M++ GF
Sbjct: 543 SGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEMRSCGFV 602
Query: 533 PDKVTYSIVMEVLGHCGYLDEA 554
D T S+V+ +L H G L+++
Sbjct: 603 GDASTISMVINML-HDGRLEKS 623
Score = 58.9 bits (141), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/168 (22%), Positives = 84/168 (50%)
Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
G D TY+ ++ L + + + + + + +P++ TYN +I +A + +
Sbjct: 460 GVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDG 519
Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
D+F + + G +P+ + Y T+I + G + A ++++M+ G P++ TY+ +I
Sbjct: 520 WDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRA 579
Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKL 522
+ G A+ +L EM + G + + T +++I + R +S L++
Sbjct: 580 RLRDGDKAASAELIKEMRSCGFVGDASTISMVINMLHDGRLEKSYLEM 627
>sp|O04491|PPR26_ARATH Putative pentatricopeptide repeat-containing protein At1g09680
OS=Arabidopsis thaliana GN=At1g09680 PE=3 SV=1
Length = 607
Score = 152 bits (383), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 87/269 (32%), Positives = 148/269 (55%), Gaps = 4/269 (1%)
Query: 381 KLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIH 440
+L QM + +P+V TY+ LI++ + N ++ A +F +M G P+ V + TLI H
Sbjct: 296 RLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGH 355
Query: 441 AKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNL 500
++ G +D+ + Y+KM + GL PD Y+ ++N K G L AA + M+ +G P+
Sbjct: 356 SRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDK 415
Query: 501 VTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHC--GYLDEAEAVF 558
+TY +I + + ++AL++ ++M G E D+V +S + V G C G + +AE
Sbjct: 416 ITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSAL--VCGMCKEGRVIDAERAL 473
Query: 559 AEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRV 618
EM R PD+ Y +++D + K G+ + ++ + M G P+V T N LL+ ++
Sbjct: 474 REMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGLCKL 533
Query: 619 GQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
GQ+ +A LL MLN+G+ P TY LL
Sbjct: 534 GQMKNADMLLDAMLNIGVVPDDITYNTLL 562
Score = 131 bits (329), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 79/271 (29%), Positives = 136/271 (50%)
Query: 377 GAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTL 436
G I +++ G NV +N L++ + + +++A VF ++ +P V++ TL
Sbjct: 222 GTIWGFYMEILDAGFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTL 281
Query: 437 IDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGC 496
I+ + K G LD + +M+ + PD FTYS +IN L K + AH LF EM +G
Sbjct: 282 INGYCKVGNLDEGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGL 341
Query: 497 IPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEA 556
IPN V + +I ++ + Y+ M + G +PD V Y+ ++ G L A
Sbjct: 342 IPNDVIFTTLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARN 401
Query: 557 VFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFL 616
+ M R+ PD+ Y L+D + + G+V A E + M Q G+ + ++L+
Sbjct: 402 IVDGMIRRGLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMC 461
Query: 617 RVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
+ G++ DA L+ ML G+KP TYT+++
Sbjct: 462 KEGRVIDAERALREMLRAGIKPDDVTYTMMM 492
Score = 120 bits (300), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 75/267 (28%), Positives = 127/267 (47%)
Query: 359 DEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVF 418
D TY+ ++ L + + + L D+M + G PN V + LIH + R ++ + +
Sbjct: 309 DVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRNGEIDLMKESY 368
Query: 419 KQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKA 478
++M G +PD V Y TL++ K G L A ++ M GL PD TY+ +I+ +
Sbjct: 369 QKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTTLIDGFCRG 428
Query: 479 GHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTY 538
G ++ A ++ EM G + V ++ ++ K A + R+M AG +PD VTY
Sbjct: 429 GDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREMLRAGIKPDDVTY 488
Query: 539 SIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQ 598
+++M+ G + EM+ VP Y +L++ K G ++ A +AML
Sbjct: 489 TMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGLCKLGQMKNADMLLDAMLN 548
Query: 599 AGLRPNVPTCNSLLSAFLRVGQLSDAY 625
G+ P+ T N+LL R S Y
Sbjct: 549 IGVVPDDITYNTLLEGHHRHANSSKRY 575
Score = 113 bits (283), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 81/338 (23%), Positives = 147/338 (43%), Gaps = 32/338 (9%)
Query: 344 LGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMV-RDGCQPNVVTYNRLI 402
FF ++ Q GF+ TY + L F L++ +V R G + L+
Sbjct: 102 FAFFKFISSQPGFRFTVETYFVLARFLAVHEMFTEAQSLIELVVSRKGKNSASSVFISLV 161
Query: 403 HS--YGRANYLNEALDVFKQMQVVGCEPDRVTYCTL-------IDIHAKAGFLDVAMDM- 452
+L +AL + +G PD + L + I LD M +
Sbjct: 162 EMRVTPMCGFLVDALMI--TYTDLGFIPDAIQCFRLSRKHRFDVPIRGCGNLLDRMMKLN 219
Query: 453 --------YKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYN 504
Y ++ AG + + +++++N K G++ A ++F E+ + P +V++N
Sbjct: 220 PTGTIWGFYMEILDAGFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFN 279
Query: 505 IMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRK 564
+I K N +L M+ + PD TYS ++ L +D A +F EM ++
Sbjct: 280 TLINGYCKVGNLDEGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKR 339
Query: 565 NWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDA 624
+P++ ++ L+ + G + E Y+ ML GL+P++ N+L++ F + G L A
Sbjct: 340 GLIPNDVIFTTLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAA 399
Query: 625 YHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGFC 662
+++ GM+ GL+P TYT L+ GFC
Sbjct: 400 RNIVDGMIRRGLRPDKITYTTLID-----------GFC 426
Score = 104 bits (259), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 61/193 (31%), Positives = 100/193 (51%), Gaps = 2/193 (1%)
Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
G + D Y T+V + A ++D M+R G +P+ +TY LI + R + A
Sbjct: 375 GLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTTLIDGFCRGGDVETA 434
Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
L++ K+M G E DRV + L+ K G + A ++M AG+ PD TY+++++
Sbjct: 435 LEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREMLRAGIKPDDVTYTMMMDA 494
Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPD 534
K G Q +L EM + G +P++VTYN+++ K ++A L M N G PD
Sbjct: 495 FCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGLCKLGQMKNADMLLDAMLNIGVVPD 554
Query: 535 KVTYSIVMEVLGH 547
+TY+ ++E GH
Sbjct: 555 DITYNTLLE--GH 565
Score = 57.0 bits (136), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 61/126 (48%), Gaps = 3/126 (2%)
Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
+AG K D+ TYT M+ + KLL +M DG P+VVTYN L++ + +
Sbjct: 478 RAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGLCKLGQMK 537
Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
A + M +G PD +TY TL++ H + + Y + G+ D +Y I+
Sbjct: 538 NADMLLDAMLNIGVVPDDITYNTLLEGHHRHA---NSSKRYIQKPEIGIVADLASYKSIV 594
Query: 473 NCLGKA 478
N L +A
Sbjct: 595 NELDRA 600
>sp|Q8GWE0|PP314_ARATH Pentatricopeptide repeat-containing protein At4g16390,
chloroplastic OS=Arabidopsis thaliana GN=P67 PE=1 SV=3
Length = 702
Score = 151 bits (382), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 123/524 (23%), Positives = 238/524 (45%), Gaps = 25/524 (4%)
Query: 332 QVLKQLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLD---QMVR 388
+V ++ +D + F+ + + G K D T+TT++ ARQ G + ++ +M
Sbjct: 183 KVFRKSKDLEKSEKLFDEMLER-GIKPDNATFTTIISC---ARQNGVPKRAVEWFEKMSS 238
Query: 389 DGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDV 448
GC+P+ VT +I +YGRA ++ AL ++ + + D VT+ TLI I+ +G D
Sbjct: 239 FGCEPDNVTMAAMIDAYGRAGNVDMALSLYDRARTEKWRIDAVTFSTLIRIYGVSGNYDG 298
Query: 449 AMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIA 508
+++Y++M+A G+ P+ Y+ +I+ +G+A A ++ +++ G PN TY ++
Sbjct: 299 CLNIYEEMKALGVKPNLVIYNRLIDSMGRAKRPWQAKIIYKDLITNGFTPNWSTYAALVR 358
Query: 509 LQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRR-KNWV 567
+AR AL +YR+M+ G + Y+ ++ + Y+DEA +F +M+ +
Sbjct: 359 AYGRARYGDDALAIYREMKEKGLSLTVILYNTLLSMCADNRYVDEAFEIFQDMKNCETCD 418
Query: 568 PDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHL 627
PD + L+ ++ +G V +A M +AG P + S++ + + Q+ D
Sbjct: 419 PDSWTFSSLITVYACSGRVSEAEAALLQMREAGFEPTLFVLTSVIQCYGKAKQVDDVVRT 478
Query: 628 LQGMLNLGLKPSLQTYTLLLSCCTEARSPYD---MGFCHELMAVSGHPAHMFLLSMPSPG 684
+L LG+ P + LL+ T+ S +G + G M +
Sbjct: 479 FDQVLELGITPDDRFCGCLLNVMTQTPSEEIGKLIGCVEKAKPKLGQVVKMLV------- 531
Query: 685 PDGQNVRDHV--GSFLEMMHSEDRESKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVY 742
+ QN + V E++ S + K+ ++ ++D E A + ++ + ++Y
Sbjct: 532 -EEQNCEEGVFKKEASELIDSIGSDVKKAYLNCLIDLCVNLNKLERACEILQLGLEYDIY 590
Query: 743 PDAVKEKGMSYWLINLHVMSDGTAVIALSRTLAWFRKQMLISGVG-PSRIDIVTGWGRRS 801
++ K + W ++L +S G A+ AL + + L SG P + I TG G+
Sbjct: 591 -TGLQSKSATQWSLHLKSLSLGAALTALHVWMNDLSEAALESGEEFPPLLGINTGHGKH- 648
Query: 802 RVTGTSLVRQAVQELLHMFSFPFFTENGNSGCFVGCGEPLNKWL 845
+ + L + L + PF G F+ WL
Sbjct: 649 KYSDKGLA-AVFESHLKELNAPFHEAPDKVGWFLTTSVAAKAWL 691
Score = 101 bits (252), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 75/294 (25%), Positives = 134/294 (45%), Gaps = 16/294 (5%)
Query: 375 QFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQ------------ 422
++ ++ KL + + D C+PN +I +G + +A+ M
Sbjct: 108 RYSSLIKLAESL--DACKPNEADVCDVITGFGGKLFEQDAVVTLNNMTNPETAPLVLNNL 165
Query: 423 VVGCEPDR--VTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGH 480
+ +P R + Y + + K+ L+ + ++ +M G+ PD T++ II+C + G
Sbjct: 166 LETMKPSREVILYNVTMKVFRKSKDLEKSEKLFDEMLERGIKPDNATFTTIISCARQNGV 225
Query: 481 LQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSI 540
+ A + F +M + GC P+ VT MI +A N AL LY + + D VT+S
Sbjct: 226 PKRAVEWFEKMSSFGCEPDNVTMAAMIDAYGRAGNVDMALSLYDRARTEKWRIDAVTFST 285
Query: 541 VMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAG 600
++ + G G D ++ EM+ P+ +Y L+D G+A +A Y+ ++ G
Sbjct: 286 LIRIYGVSGNYDGCLNIYEEMKALGVKPNLVIYNRLIDSMGRAKRPWQAKIIYKDLITNG 345
Query: 601 LRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEAR 654
PN T +L+ A+ R DA + + M GL ++ Y LLS C + R
Sbjct: 346 FTPNWSTYAALVRAYGRARYGDDALAIYREMKEKGLSLTVILYNTLLSMCADNR 399
Score = 68.6 bits (166), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/171 (22%), Positives = 79/171 (46%)
Query: 500 LVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFA 559
++ YN+ + + K+++ + + KL+ +M G +PD T++ ++ G A F
Sbjct: 175 VILYNVTMKVFRKSKDLEKSEKLFDEMLERGIKPDNATFTTIISCARQNGVPKRAVEWFE 234
Query: 560 EMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVG 619
+M PD ++D +G+AGNV A Y+ R + T ++L+ + G
Sbjct: 235 KMSSFGCEPDNVTMAAMIDAYGRAGNVDMALSLYDRARTEKWRIDAVTFSTLIRIYGVSG 294
Query: 620 QLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGFCHELMAVSG 670
++ + M LG+KP+L Y L+ A+ P+ ++ + +G
Sbjct: 295 NYDGCLNIYEEMKALGVKPNLVIYNRLIDSMGRAKRPWQAKIIYKDLITNG 345
>sp|Q76C99|RF1_ORYSI Protein Rf1, mitochondrial OS=Oryza sativa subsp. indica GN=Rf1
PE=2 SV=1
Length = 791
Score = 151 bits (382), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 91/329 (27%), Positives = 158/329 (48%), Gaps = 35/329 (10%)
Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
G D TY +++ L +A+ ++L+ MV++G P+ +TYN ++H Y + EA
Sbjct: 226 GILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEA 285
Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTY------ 468
+ K+M+ G EPD VTY L+D K G A ++ M GL P+ TY
Sbjct: 286 IGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQG 345
Query: 469 -----------------------------SVIINCLGKAGHLQAAHQLFCEMVNQGCIPN 499
S++I K G + A +F +M QG PN
Sbjct: 346 YATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPN 405
Query: 500 LVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFA 559
VTY +I + K+ + A+ + M + G P + Y+ ++ L C + AE +
Sbjct: 406 AVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELIL 465
Query: 560 EMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVG 619
EM + + + ++D K G V ++ + +E M++ G++PNV T N+L++ + G
Sbjct: 466 EMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAG 525
Query: 620 QLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
++ +A LL GM+++GLKP+ TY+ L++
Sbjct: 526 KMDEAMKLLSGMVSVGLKPNTVTYSTLIN 554
Score = 144 bits (363), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 101/418 (24%), Positives = 192/418 (45%), Gaps = 13/418 (3%)
Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLI 402
A+GF +R G + D TY+ ++ L + + K+ D M + G +P + TY L+
Sbjct: 285 AIGFLKKMRSD-GVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLL 343
Query: 403 HSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLS 462
Y L E + M G PD + LI +AK G +D AM ++ KM+ GL+
Sbjct: 344 QGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLN 403
Query: 463 PDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKL 522
P+ TY +I L K+G ++ A F +M+++G P + YN +I ++ A +L
Sbjct: 404 PNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEEL 463
Query: 523 YRDMQNAGFEPDKVTYSIVMEVLGHC--GYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLW 580
+M + G + + ++ +++ HC G + E+E +F M R P+ Y L++ +
Sbjct: 464 ILEMLDRGICLNTIFFNSIID--SHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGY 521
Query: 581 GKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSL 640
AG + +A + M+ GL+PN T ++L++ + ++ ++ DA L + M + G+ P +
Sbjct: 522 CLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDI 581
Query: 641 QTYTLLLSCCTEARSPYDMGFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEM 700
TY ++L + R + + SG + ++ G + D +
Sbjct: 582 ITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQN 641
Query: 701 MHSEDRESKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAVKEKGMSYWLINL 758
+ D + + + ++D L K G +EA ++ + + P+ YW L
Sbjct: 642 LCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPN--------YWTYRL 691
Score = 136 bits (343), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 92/328 (28%), Positives = 159/328 (48%), Gaps = 5/328 (1%)
Query: 353 QAGFKHDEHTYTTMV-GILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
+ GF+ D +T ++ G+ R A++ +L +M GC PNV +YN L+ N
Sbjct: 115 KKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTELGCIPNVFSYNILLKGLCDENRS 174
Query: 412 NEALDVFKQM---QVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTY 468
EAL++ M + G PD V+Y T+I+ K G D A Y +M G+ PD TY
Sbjct: 175 QEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTY 234
Query: 469 SVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQN 528
+ II L KA + A ++ MV G +P+ +TYN ++ + + A+ + M++
Sbjct: 235 NSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRS 294
Query: 529 AGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRK 588
G EPD VTYS++M+ L G EA +F M ++ P+ YG L+ + G + +
Sbjct: 295 DGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVE 354
Query: 589 AWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
+ M++ G+ P+ + L+ A+ + G++ A + M GL P+ TY ++
Sbjct: 355 MHGLLDLMVRNGIHPDHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIG 414
Query: 649 C-CTEARSPYDMGFCHELMAVSGHPAHM 675
C R M + +++ P ++
Sbjct: 415 ILCKSGRVEDAMLYFEQMIDEGLSPGNI 442
Score = 122 bits (307), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 71/244 (29%), Positives = 133/244 (54%)
Query: 381 KLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIH 440
KL + MVR G +PNV+TYN LI+ Y A ++EA+ + M VG +P+ VTY TLI+ +
Sbjct: 497 KLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGY 556
Query: 441 AKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNL 500
K ++ A+ ++K+M+++G+SPD TY++I+ L + AA +L+ + G L
Sbjct: 557 CKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIEL 616
Query: 501 VTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAE 560
TYNI++ K + AL++++++ + + T++I+++ L G DEA+ +F
Sbjct: 617 STYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVA 676
Query: 561 MRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQ 620
VP+ Y L+ + G + + + + +M G + N ++ L+ G+
Sbjct: 677 FSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQRGE 736
Query: 621 LSDA 624
++ A
Sbjct: 737 ITRA 740
Score = 122 bits (306), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 77/295 (26%), Positives = 142/295 (48%)
Query: 352 RQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYL 411
RQ G + TY ++GIL ++ + +QM+ +G P + YN LIH N
Sbjct: 398 RQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKW 457
Query: 412 NEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
A ++ +M G + + + ++ID H K G + + +++ M G+ P+ TY+ +
Sbjct: 458 ERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTL 517
Query: 472 INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF 531
IN AG + A +L MV+ G PN VTY+ +I K + AL L+++M+++G
Sbjct: 518 INGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGV 577
Query: 532 EPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWE 591
PD +TY+I+++ L A+ ++ + + Y +++ K A +
Sbjct: 578 SPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQ 637
Query: 592 WYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLL 646
++ + L+ T N ++ A L+VG+ +A L + GL P+ TY L+
Sbjct: 638 MFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLM 692
Score = 102 bits (254), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 80/290 (27%), Positives = 132/290 (45%), Gaps = 14/290 (4%)
Query: 382 LLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCE---PDRVTYCTLID 438
+ D+++R G ++ NR + R + A+ + +M G + PD TY LI
Sbjct: 37 VFDELLRRGRGASIYGLNRALADVAR-DSPAAAVSRYNRMARAGADEVTPDLCTYGILIG 95
Query: 439 IHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFC-EMVNQGCI 497
+AG LD+ + G D ++ ++ L A + M GCI
Sbjct: 96 CCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTELGCI 155
Query: 498 PNLVTYNIMIALQAKARNYQSALKLYR---DMQNAGFEPDKVTYSIVMEVLGHCGYLDEA 554
PN+ +YNI++ Q AL+L D + G PD V+Y+ V+ G D+A
Sbjct: 156 PNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEGDSDKA 215
Query: 555 EAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSA 614
+ + EM + +PD Y ++ KA + KA E M++ G+ P+ T NS+L
Sbjct: 216 YSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHG 275
Query: 615 FLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS--C----CTEARSPYD 658
+ GQ +A L+ M + G++P + TY+LL+ C C EAR +D
Sbjct: 276 YCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFD 325
Score = 63.2 bits (152), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 79/165 (47%), Gaps = 1/165 (0%)
Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLI 402
AL F + +G D TY ++ L + R+ A +L ++ G Q + TYN ++
Sbjct: 565 ALVLFKEME-SSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIIL 623
Query: 403 HSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLS 462
H + ++AL +F+ + ++ + + T+ +ID K G D A D++ + GL
Sbjct: 624 HGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLV 683
Query: 463 PDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMI 507
P+ +TY ++ + G L+ QLF M + GC + N ++
Sbjct: 684 PNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIV 728
>sp|Q9SXD1|PPR91_ARATH Pentatricopeptide repeat-containing protein At1g62670,
mitochondrial OS=Arabidopsis thaliana GN=At1g62670 PE=2
SV=2
Length = 630
Score = 150 bits (378), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 107/393 (27%), Positives = 190/393 (48%), Gaps = 8/393 (2%)
Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
G H+ +TY+ ++ R Q +L +M++ G +PN+VT + L++ Y + ++EA
Sbjct: 111 GIPHNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEA 170
Query: 415 LDVFKQMQVVGCEPDRVTYCTLID---IHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVI 471
+ + QM V G +P+ VT+ TLI +H KA AM + +M A G PD TY V+
Sbjct: 171 VALVDQMFVTGYQPNTVTFNTLIHGLFLHNKAS---EAMALIDRMVAKGCQPDLVTYGVV 227
Query: 472 INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF 531
+N L K G A L +M P ++ YN +I K ++ AL L+++M+ G
Sbjct: 228 VNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGI 287
Query: 532 EPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWE 591
P+ VTYS ++ L + G +A + ++M + PD + L+D + K G + +A +
Sbjct: 288 RPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEK 347
Query: 592 WYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTY-TLLLSCC 650
Y+ M++ + P++ T +SL++ F +L +A + + M++ P + TY TL+ C
Sbjct: 348 LYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFC 407
Query: 651 TEARSPYDMGFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRESKR 710
R M E M+ G + ++ G D + M S+
Sbjct: 408 KYKRVEEGMEVFRE-MSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNI 466
Query: 711 GLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYP 743
+ ++D L K+G E+A V+E + + P
Sbjct: 467 MTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEP 499
Score = 146 bits (369), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 104/402 (25%), Positives = 185/402 (46%), Gaps = 6/402 (1%)
Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
+ G++ + T ++++ +++ L+DQM G QPN VT+N LIH N +
Sbjct: 144 KLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKAS 203
Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
EA+ + +M GC+PD VTY +++ K G D+A ++ KM+ L P Y+ II
Sbjct: 204 EAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTII 263
Query: 473 NCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFE 532
+ L K H+ A LF EM +G PN+VTY+ +I+ + A +L DM
Sbjct: 264 DGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKIN 323
Query: 533 PDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEW 592
PD T+S +++ G L EAE ++ EM +++ P Y L++ + + +A +
Sbjct: 324 PDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQM 383
Query: 593 YEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTE 652
+E M+ P+V T N+L+ F + ++ + + + M GL + TY +L+ +
Sbjct: 384 FEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQ 443
Query: 653 ARSPYDMGFCHEL---MAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRESK 709
A D E+ M G P ++ + G + E + E
Sbjct: 444 AG---DCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPT 500
Query: 710 RGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAVKEKGM 751
+ +++ + K+G E+ ++ + K V PD V M
Sbjct: 501 IYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTM 542
Score = 139 bits (351), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 83/296 (28%), Positives = 152/296 (51%)
Query: 359 DEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVF 418
D T++ ++ + + KL D+MV+ P++VTY+ LI+ + + L+EA +F
Sbjct: 325 DVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMF 384
Query: 419 KQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKA 478
+ M C PD VTY TLI K ++ M+++++M GL +T TY+++I L +A
Sbjct: 385 EFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQA 444
Query: 479 GHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTY 538
G A ++F EMV+ G PN++TYN ++ K + A+ ++ +Q + EP TY
Sbjct: 445 GDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTY 504
Query: 539 SIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQ 598
+I++E + G +++ +F + K PD Y ++ + + G+ +A ++ M +
Sbjct: 505 NIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKE 564
Query: 599 AGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEAR 654
G PN N+L+ A LR G + L++ M + G T L+ + + R
Sbjct: 565 DGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTNMLHDGR 620
Score = 138 bits (348), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 92/323 (28%), Positives = 151/323 (46%), Gaps = 19/323 (5%)
Query: 347 FNWLRR--QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIH- 403
FN L + Q + Y T++ L + + L +M G +PNVVTY+ LI
Sbjct: 241 FNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISC 300
Query: 404 --SYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGL 461
+YGR ++A + M PD T+ LID K G L A +Y +M +
Sbjct: 301 LCNYGR---WSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSI 357
Query: 462 SPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALK 521
P TYS +IN L A Q+F MV++ C P++VTYN +I K + + ++
Sbjct: 358 DPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGME 417
Query: 522 LYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWG 581
++R+M G + VTY+I+++ L G D A+ +F EM P+ Y L+D
Sbjct: 418 VFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLC 477
Query: 582 KAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQ 641
K G + KA +E + ++ + P + T N ++ + G++ D + L + G+KP +
Sbjct: 478 KNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVV 537
Query: 642 TYTLLLSCCTEARSPYDMGFCHE 664
Y ++S GFC +
Sbjct: 538 AYNTMIS-----------GFCRK 549
Score = 135 bits (340), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 83/305 (27%), Positives = 155/305 (50%), Gaps = 1/305 (0%)
Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLI 402
AL F + + G + + TY++++ L ++ ++LL M+ P+V T++ LI
Sbjct: 275 ALNLFKEMETK-GIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALI 333
Query: 403 HSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLS 462
++ + L EA ++ +M +P VTY +LI+ LD A M++ M +
Sbjct: 334 DAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCF 393
Query: 463 PDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKL 522
PD TY+ +I K ++ ++F EM +G + N VTYNI+I +A + A ++
Sbjct: 394 PDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEI 453
Query: 523 YRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGK 582
+++M + G P+ +TY+ +++ L G L++A VF ++R P Y ++++ K
Sbjct: 454 FKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCK 513
Query: 583 AGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQT 642
AG V W+ + + G++P+V N+++S F R G +A L + M G P+
Sbjct: 514 AGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGC 573
Query: 643 YTLLL 647
Y L+
Sbjct: 574 YNTLI 578
Score = 122 bits (305), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 99/396 (25%), Positives = 179/396 (45%), Gaps = 24/396 (6%)
Query: 363 YTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQ 422
++ ++ + + +F + L +QM G N TY+ LI+ + R + L AL V +M
Sbjct: 84 FSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILINCFCRRSQLPLALAVLGKMM 143
Query: 423 VVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQ 482
+G EP+ VT +L++ + + + A+ + +M G P+T T++ +I+ L
Sbjct: 144 KLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKAS 203
Query: 483 AAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVM 542
A L MV +GC P+LVTY +++ K + A L M+ EP + Y+ ++
Sbjct: 204 EAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTII 263
Query: 543 EVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLR 602
+ L ++D+A +F EM K P+ Y L+ G A M++ +
Sbjct: 264 DGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKIN 323
Query: 603 PNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGFC 662
P+V T ++L+ AF++ G+L +A L M+ + PS+ TY+ L++ GFC
Sbjct: 324 PDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLIN-----------GFC 372
Query: 663 HELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSED-----RE-SKRGLVDAV 716
F++S PD + F + E+ RE S+RGLV
Sbjct: 373 MHDRLDEAKQMFEFMVS-KHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNT 431
Query: 717 VDF------LHKSGLKEEAGSVWEVAAQKNVYPDAV 746
V + L ++G + A +++ V P+ +
Sbjct: 432 VTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIM 467
Score = 111 bits (278), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 77/283 (27%), Positives = 131/283 (46%), Gaps = 6/283 (2%)
Query: 382 LLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHA 441
L +MV+ P+++ +++L+ + + N + + + +QMQ +G + TY LI+
Sbjct: 68 LFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILINCFC 127
Query: 442 KAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLV 501
+ L +A+ + KM G P+ T S ++N + + A L +M G PN V
Sbjct: 128 RRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTV 187
Query: 502 TYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEM 561
T+N +I A+ L M G +PD VTY +V+ L G D A + +M
Sbjct: 188 TFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKM 247
Query: 562 RRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQL 621
+ P +Y ++D K ++ A ++ M G+RPNV T +SL+S G+
Sbjct: 248 EQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRW 307
Query: 622 SDAYHLLQGMLNLGLKPSLQTYTLLLSC------CTEARSPYD 658
SDA LL M+ + P + T++ L+ EA YD
Sbjct: 308 SDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYD 350
Score = 107 bits (268), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 67/245 (27%), Positives = 121/245 (49%), Gaps = 1/245 (0%)
Query: 411 LNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSV 470
L++A+ +F +M P + + L+ AK DV + + ++MQ G+ + +TYS+
Sbjct: 62 LDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSI 121
Query: 471 IINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAG 530
+INC + L A + +M+ G PN+VT + ++ ++ A+ L M G
Sbjct: 122 LINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTG 181
Query: 531 FEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAW 590
++P+ VT++ ++ L EA A+ M K PD YG++V+ K G+ A+
Sbjct: 182 YQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAF 241
Query: 591 EWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSC- 649
M Q L P V N+++ + + DA +L + M G++P++ TY+ L+SC
Sbjct: 242 NLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCL 301
Query: 650 CTEAR 654
C R
Sbjct: 302 CNYGR 306
Score = 99.8 bits (247), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 104/202 (51%), Gaps = 1/202 (0%)
Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
Q G + TY ++ L +A ++ +MV DG PN++TYN L+ + L
Sbjct: 424 QRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLE 483
Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
+A+ VF+ +Q EP TY +I+ KAG ++ D++ + G+ PD Y+ +I
Sbjct: 484 KAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMI 543
Query: 473 NCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFE 532
+ + G + A LF EM G +PN YN +I + + + +++ +L ++M++ GF
Sbjct: 544 SGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFA 603
Query: 533 PDKVTYSIVMEVLGHCGYLDEA 554
D T +V +L H G LD++
Sbjct: 604 GDASTIGLVTNML-HDGRLDKS 624
>sp|Q9FLL3|PP412_ARATH Pentatricopeptide repeat-containing protein At5g41170,
mitochondrial OS=Arabidopsis thaliana GN=At5g41170 PE=2
SV=1
Length = 527
Score = 149 bits (376), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 89/325 (27%), Positives = 165/325 (50%), Gaps = 1/325 (0%)
Query: 325 MDAYQANQVLKQLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLD 384
+D + V+ +++ V + + L+ G HD +T ++ ++ Q + L
Sbjct: 73 IDFTKLLNVIAKMKKFDVVINLCDHLQIM-GVSHDLYTCNLLMNCFCQSSQPYLASSFLG 131
Query: 385 QMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAG 444
+M++ G +P++VT+ LI+ + N + EA+ + QM +G +PD V Y T+ID K G
Sbjct: 132 KMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNG 191
Query: 445 FLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYN 504
++ A+ ++ +M+ G+ PD Y+ ++N L +G + A L M + P+++T+N
Sbjct: 192 HVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFN 251
Query: 505 IMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRK 564
+I K + A +LY +M P+ TY+ ++ G +DEA +F M K
Sbjct: 252 ALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETK 311
Query: 565 NWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDA 624
PD Y L++ + K V A + + M Q GL N T +L+ F +VG+ + A
Sbjct: 312 GCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVA 371
Query: 625 YHLLQGMLNLGLKPSLQTYTLLLSC 649
+ M++ G+ P+++TY +LL C
Sbjct: 372 QEVFSHMVSRGVPPNIRTYNVLLHC 396
Score = 139 bits (351), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 82/278 (29%), Positives = 146/278 (52%), Gaps = 3/278 (1%)
Query: 357 KHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALD 416
K D T+ ++ + +F +L ++M+R PN+ TY LI+ + ++EA
Sbjct: 244 KPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQ 303
Query: 417 VFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLG 476
+F M+ GC PD V Y +LI+ K +D AM ++ +M GL+ +T TY+ +I G
Sbjct: 304 MFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFG 363
Query: 477 KAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNA---GFEP 533
+ G A ++F MV++G PN+ TYN+++ + AL ++ DMQ G P
Sbjct: 364 QVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAP 423
Query: 534 DKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWY 593
+ TY++++ L + G L++A VF +MR++ Y +++ KAG V+ A +
Sbjct: 424 NIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLF 483
Query: 594 EAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGM 631
++ G++PNV T +++S R G +A+ L + M
Sbjct: 484 CSLPSKGVKPNVVTYTTMISGLFREGLKHEAHVLFRKM 521
Score = 130 bits (328), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 83/283 (29%), Positives = 138/283 (48%), Gaps = 5/283 (1%)
Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
+ G K D YTT++ L + L DQM G +P+VV Y L++ +
Sbjct: 170 EMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWR 229
Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAG-FLDVAMDMYKKMQAAGLSPDTFTYSVI 471
+A + + M +PD +T+ LID K G FLD A ++Y +M ++P+ FTY+ +
Sbjct: 230 DADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLD-AEELYNEMIRMSIAPNIFTYTSL 288
Query: 472 INCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGF 531
IN G + A Q+F M +GC P++V Y +I K + A+K++ +M G
Sbjct: 289 INGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGL 348
Query: 532 EPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWE 591
+ +TY+ +++ G G + A+ VF+ M + P+ Y +L+ G V+KA
Sbjct: 349 TGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALM 408
Query: 592 WYEAMLQA---GLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGM 631
+E M + G+ PN+ T N LL G+L A + + M
Sbjct: 409 IFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDM 451
Score = 116 bits (290), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 69/253 (27%), Positives = 127/253 (50%), Gaps = 6/253 (2%)
Query: 411 LNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSV 470
NEALD+F M P + + L+++ AK DV +++ +Q G+S D +T ++
Sbjct: 53 FNEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCNL 112
Query: 471 IINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAG 530
++NC ++ A +M+ G P++VT+ +I + A+ + M G
Sbjct: 113 LMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMG 172
Query: 531 FEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAW 590
+PD V Y+ +++ L G+++ A ++F +M PD +Y LV+ +G R A
Sbjct: 173 IKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDAD 232
Query: 591 EWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS-- 648
M + ++P+V T N+L+ AF++ G+ DA L M+ + + P++ TYT L++
Sbjct: 233 SLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGF 292
Query: 649 ----CCTEARSPY 657
C EAR +
Sbjct: 293 CMEGCVDEARQMF 305
Score = 111 bits (278), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 68/274 (24%), Positives = 126/274 (45%)
Query: 375 QFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYC 434
QF L MV P+++ + +L++ + + +++ +Q++G D T
Sbjct: 52 QFNEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCN 111
Query: 435 TLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQ 494
L++ ++ +A KM G PD T++ +IN ++ A + +MV
Sbjct: 112 LLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEM 171
Query: 495 GCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEA 554
G P++V Y +I K + AL L+ M+N G PD V Y+ ++ L + G +A
Sbjct: 172 GIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDA 231
Query: 555 EAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSA 614
+++ M ++ PD + L+D + K G A E Y M++ + PN+ T SL++
Sbjct: 232 DSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLING 291
Query: 615 FLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
F G + +A + M G P + YT L++
Sbjct: 292 FCMEGCVDEARQMFYLMETKGCFPDVVAYTSLIN 325
Score = 73.9 bits (180), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 108/218 (49%), Gaps = 3/218 (1%)
Query: 349 WLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRA 408
+L G D YT+++ + ++ K+ +M + G N +TY LI +G+
Sbjct: 306 YLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQV 365
Query: 409 NYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAA---GLSPDT 465
N A +VF M G P+ TY L+ G + A+ +++ MQ G++P+
Sbjct: 366 GKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNI 425
Query: 466 FTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRD 525
+TY+V+++ L G L+ A +F +M + ++TY I+I KA ++A+ L+
Sbjct: 426 WTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFCS 485
Query: 526 MQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRR 563
+ + G +P+ VTY+ ++ L G EA +F +M+
Sbjct: 486 LPSKGVKPNVVTYTTMISGLFREGLKHEAHVLFRKMKE 523
Score = 73.6 bits (179), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 55/181 (30%), Positives = 91/181 (50%), Gaps = 3/181 (1%)
Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
Q G + TYTT++ G+ + ++ MV G PN+ TYN L+H +
Sbjct: 345 QKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVK 404
Query: 413 EALDVFKQMQ---VVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYS 469
+AL +F+ MQ + G P+ TY L+ G L+ A+ +++ M+ + TY+
Sbjct: 405 KALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYT 464
Query: 470 VIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNA 529
+II + KAG ++ A LFC + ++G PN+VTY MI+ + A L+R M+
Sbjct: 465 IIIQGMCKAGKVKNAVNLFCSLPSKGVKPNVVTYTTMISGLFREGLKHEAHVLFRKMKED 524
Query: 530 G 530
G
Sbjct: 525 G 525
Score = 34.7 bits (78), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 33/139 (23%), Positives = 55/139 (39%), Gaps = 38/139 (27%)
Query: 362 TYTTMVGIL---GRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVF 418
TY ++ L G+ ++ I + + + DG PN+ TYN L+H L +AL VF
Sbjct: 389 TYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVF 448
Query: 419 KQMQ-----------------------------------VVGCEPDRVTYCTLIDIHAKA 443
+ M+ G +P+ VTY T+I +
Sbjct: 449 EDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPSKGVKPNVVTYTTMISGLFRE 508
Query: 444 GFLDVAMDMYKKMQAAGLS 462
G A +++KM+ G+S
Sbjct: 509 GLKHEAHVLFRKMKEDGVS 527
>sp|Q3ECK2|PPR92_ARATH Pentatricopeptide repeat-containing protein At1g62680,
mitochondrial OS=Arabidopsis thaliana GN=At1g62680 PE=2
SV=2
Length = 548
Score = 148 bits (374), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 117/450 (26%), Positives = 207/450 (46%), Gaps = 61/450 (13%)
Query: 269 ERFSKPS-REMKIPAGLAPFS-----RHFASTGNVVESVSRILRQWKWGPLAE-----EA 317
ER SK R++K+ + FS R F S + +S I++ K+ + E
Sbjct: 54 ERLSKTRLRDIKLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEV 113
Query: 318 LGNTNYSMDAYQANQVLKQLQ---DHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRAR 374
LG N D Y N V+ ++AL + + G++ D T ++V R
Sbjct: 114 LGIRN---DLYTFNIVINCFCCCFQVSLALSILGKMLK-LGYEPDRVTIGSLVNGFCRRN 169
Query: 375 QFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYC 434
+ L+D+MV G +P++V YN +I S + +N+A D FK+++ G P+ VTY
Sbjct: 170 RVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYT 229
Query: 435 TLI-----------------------------------DIHAKAGFLDVAMDMYKKMQAA 459
L+ D K G + A +++++M
Sbjct: 230 ALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRM 289
Query: 460 GLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSA 519
+ PD TYS +IN L + A+Q+F MV++GC+ ++V+YN +I KA+ +
Sbjct: 290 SIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDG 349
Query: 520 LKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDL 579
+KL+R+M G + VTY+ +++ G +D+A+ F++M PD Y +L+
Sbjct: 350 MKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGG 409
Query: 580 WGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPS 639
G + KA +E M + + ++ T +++ + G++ +A+ L + GLKP
Sbjct: 410 LCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPD 469
Query: 640 LQTYTLLLS-CCTEARSPYDMGFCHELMAV 668
+ TYT ++S CT+ G HE+ A+
Sbjct: 470 IVTYTTMMSGLCTK-------GLLHEVEAL 492
Score = 138 bits (348), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 85/294 (28%), Positives = 150/294 (51%), Gaps = 1/294 (0%)
Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLI 402
A FF + R+ G + + TYT +V L + ++ +LL M++ PNV+TY+ L+
Sbjct: 209 AFDFFKEIERK-GIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALL 267
Query: 403 HSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLS 462
++ + + EA ++F++M + +PD VTY +LI+ +D A M+ M + G
Sbjct: 268 DAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCL 327
Query: 463 PDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKL 522
D +Y+ +IN KA ++ +LF EM +G + N VTYN +I +A + A +
Sbjct: 328 ADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEF 387
Query: 523 YRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGK 582
+ M G PD TY+I++ L G L++A +F +M+++ D Y ++ K
Sbjct: 388 FSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCK 447
Query: 583 AGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGL 636
G V +AW + ++ GL+P++ T +++S G L + L M GL
Sbjct: 448 TGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGL 501
Score = 123 bits (309), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 80/279 (28%), Positives = 137/279 (49%), Gaps = 8/279 (2%)
Query: 362 TYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQM 421
TY+ ++ + + +L ++MVR P++VTY+ LI+ + ++EA +F M
Sbjct: 262 TYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLM 321
Query: 422 QVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHL 481
GC D V+Y TLI+ KA ++ M ++++M GL +T TY+ +I +AG +
Sbjct: 322 VSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDV 381
Query: 482 QAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIV 541
A + F +M G P++ TYNI++ + AL ++ DMQ + D VTY+ V
Sbjct: 382 DKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTV 441
Query: 542 MEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGL 601
+ + G ++EA ++F + K PD Y ++ G + + Y M Q GL
Sbjct: 442 IRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGL 501
Query: 602 RPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSL 640
N T L G ++ + L++ ML+ G PSL
Sbjct: 502 MKNDCT--------LSDGDITLSAELIKKMLSCGYAPSL 532
Score = 116 bits (290), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 115/476 (24%), Positives = 204/476 (42%), Gaps = 56/476 (11%)
Query: 363 YTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQ 422
+ ++ + + +++ + L +M G + ++ T+N +I+ + ++ AL + +M
Sbjct: 88 FNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVSLALSILGKML 147
Query: 423 VVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQ 482
+G EPDRVT +L++ + + A+ + KM G PD Y+ II+ L K +
Sbjct: 148 KLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVN 207
Query: 483 AAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVM 542
A F E+ +G PN+VTY ++ + + A +L DM P+ +TYS ++
Sbjct: 208 DAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALL 267
Query: 543 EVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLR 602
+ G + EA+ +F EM R + PD Y L++ + +A + ++ M+ G
Sbjct: 268 DAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCL 327
Query: 603 PNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGFC 662
+V + N+L++ F + ++ D L + M GL + TY L+ GF
Sbjct: 328 ADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQ-----------GF- 375
Query: 663 HELMAVSGHPAHMFLLSMPSPG--PDGQNVRDHVGSFLE-------MMHSEDRESKRGLV 713
A A F M G PD +G + ++ ED + + +
Sbjct: 376 --FQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDL 433
Query: 714 D-----AVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAVKEKGMSYWLIN---LH------ 759
D V+ + K+G EEA S++ + K + PD V M L LH
Sbjct: 434 DIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALY 493
Query: 760 -------------VMSDGTAVIALSRTLAWFRKQMLISGVGPSRI-DIVTGWGRRS 801
+SDG I LS L K+ML G PS + DI +G +++
Sbjct: 494 TKMKQEGLMKNDCTLSDGD--ITLSAELI---KKMLSCGYAPSLLKDIKSGVCKKA 544
Score = 105 bits (262), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 84/323 (26%), Positives = 148/323 (45%), Gaps = 12/323 (3%)
Query: 400 RLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAA 459
RL + R LN+A+D+F M P V + L+ K DV + + KKM+
Sbjct: 55 RLSKTRLRDIKLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVL 114
Query: 460 GLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSA 519
G+ D +T++++INC + A + +M+ G P+ VT ++ + A
Sbjct: 115 GIRNDLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDA 174
Query: 520 LKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDL 579
+ L M G++PD V Y+ +++ L +++A F E+ RK P+ Y LV+
Sbjct: 175 VSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNG 234
Query: 580 WGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPS 639
+ A M++ + PNV T ++LL AF++ G++ +A L + M+ + + P
Sbjct: 235 LCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPD 294
Query: 640 LQTYTLLLS--CCTEARSPYDMGFCHELMAVSGHPAHMFLLSMPSPG-PDGQNVRDHVGS 696
+ TY+ L++ C + + F +LM G A + + G + V D +
Sbjct: 295 IVTYSSLINGLCLHDRIDEANQMF--DLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKL 352
Query: 697 FLEMMHSEDRESKRGLVDAVVDF 719
F EM S+RGLV V +
Sbjct: 353 FREM-------SQRGLVSNTVTY 368
Score = 66.6 bits (161), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 68/147 (46%)
Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
Q G + TY T++ +A + QM G P++ TYN L+ L
Sbjct: 358 QRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELE 417
Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
+AL +F+ MQ + D VTY T+I K G ++ A ++ + GL PD TY+ ++
Sbjct: 418 KALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMM 477
Query: 473 NCLGKAGHLQAAHQLFCEMVNQGCIPN 499
+ L G L L+ +M +G + N
Sbjct: 478 SGLCTKGLLHEVEALYTKMKQEGLMKN 504
>sp|Q9FMD3|PP389_ARATH Pentatricopeptide repeat-containing protein At5g16640,
mitochondrial OS=Arabidopsis thaliana GN=At5g16640 PE=2
SV=1
Length = 504
Score = 148 bits (374), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 91/317 (28%), Positives = 164/317 (51%), Gaps = 7/317 (2%)
Query: 334 LKQLQDHTVALGFFNWLRRQA-GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQ 392
+ +++ + V + + W + Q G H+ T ++ R Q L +M++ G +
Sbjct: 91 ISKMKKYDVVI--YLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHE 148
Query: 393 PNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDM 452
P++VT+ L++ + R + + +AL +F QM +G +P+ V Y T+ID K+ +D A+D+
Sbjct: 149 PSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDL 208
Query: 453 YKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAK 512
+M+ G+ PD TY+ +I+ L +G A ++ M + P++ T+N +I K
Sbjct: 209 LNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVK 268
Query: 513 ARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGY--LDEAEAVFAEMRRKNWVPDE 570
A + Y +M +PD VTYS++ + G C Y LDEAE +F M K PD
Sbjct: 269 EGRVSEAEEFYEEMIRRSLDPDIVTYSLL--IYGLCMYSRLDEAEEMFGFMVSKGCFPDV 326
Query: 571 PVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQG 630
Y +L++ + K+ V + + M Q G+ N T L+ + R G+L+ A + +
Sbjct: 327 VTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRR 386
Query: 631 MLNLGLKPSLQTYTLLL 647
M+ G+ P++ TY +LL
Sbjct: 387 MVFCGVHPNIITYNVLL 403
Score = 140 bits (353), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 89/295 (30%), Positives = 153/295 (51%), Gaps = 4/295 (1%)
Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
G+K + Y T++ L +++Q LL++M +DG P+VVTYN LI + ++A
Sbjct: 181 GYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDA 240
Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
+ M PD T+ LID K G + A + Y++M L PD TYS++I
Sbjct: 241 TRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYG 300
Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPD 534
L L A ++F MV++GC P++VTY+I+I K++ + +KL+ +M G +
Sbjct: 301 LCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRN 360
Query: 535 KVTYSIVMEVLGHC--GYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEW 592
VTY+I+++ G+C G L+ AE +F M P+ Y +L+ G + KA
Sbjct: 361 TVTYTILIQ--GYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVI 418
Query: 593 YEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
M + G+ ++ T N ++ + G+++DA+ + + GL P + TYT ++
Sbjct: 419 LADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMM 473
Score = 133 bits (334), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 83/297 (27%), Positives = 151/297 (50%), Gaps = 1/297 (0%)
Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLI 402
AL N + + G D TY +++ L + ++ +++ M + P+V T+N LI
Sbjct: 205 ALDLLNRMEKD-GIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALI 263
Query: 403 HSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLS 462
+ + ++EA + +++M +PD VTY LI LD A +M+ M + G
Sbjct: 264 DACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCF 323
Query: 463 PDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKL 522
PD TYS++IN K+ ++ +LFCEM +G + N VTY I+I +A A ++
Sbjct: 324 PDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEI 383
Query: 523 YRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGK 582
+R M G P+ +TY++++ L G +++A + A+M++ D Y +++ K
Sbjct: 384 FRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCK 443
Query: 583 AGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPS 639
AG V AW+ Y ++ GL P++ T +++ + G +A L + M G+ P+
Sbjct: 444 AGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKGLRREADALFRKMKEDGILPN 500
Score = 112 bits (280), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 67/256 (26%), Positives = 128/256 (50%)
Query: 393 PNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDM 452
P++ ++RL+ + + + + +++QMQ++G + T L++ + L +A+
Sbjct: 79 PSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSF 138
Query: 453 YKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAK 512
KM G P T+ ++N + + A +F +MV G PN+V YN +I K
Sbjct: 139 LGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCK 198
Query: 513 ARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPV 572
++ +AL L M+ G PD VTY+ ++ L G +A + + M ++ PD
Sbjct: 199 SKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFT 258
Query: 573 YGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGML 632
+ L+D K G V +A E+YE M++ L P++ T + L+ +L +A + M+
Sbjct: 259 FNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMV 318
Query: 633 NLGLKPSLQTYTLLLS 648
+ G P + TY++L++
Sbjct: 319 SKGCFPDVVTYSILIN 334
Score = 110 bits (275), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 65/212 (30%), Positives = 112/212 (52%)
Query: 359 DEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVF 418
D TY+ ++ L + ++ MV GC P+VVTY+ LI+ Y ++ + + +F
Sbjct: 290 DIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLF 349
Query: 419 KQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKA 478
+M G + VTY LI + +AG L+VA +++++M G+ P+ TY+V+++ L
Sbjct: 350 CEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDN 409
Query: 479 GHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTY 538
G ++ A + +M G ++VTYNI+I KA A +Y + G PD TY
Sbjct: 410 GKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTY 469
Query: 539 SIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDE 570
+ +M L G EA+A+F +M+ +P+E
Sbjct: 470 TTMMLGLYKKGLRREADALFRKMKEDGILPNE 501
Score = 92.0 bits (227), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 59/250 (23%), Positives = 118/250 (47%)
Query: 398 YNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQ 457
Y ++ + R L+++LD+F M P + L+ +K DV + ++++MQ
Sbjct: 49 YREMLRNGIRFMKLDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQ 108
Query: 458 AAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQ 517
G+ + T ++++NC + L A +M+ G P++VT+ ++ +
Sbjct: 109 MLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVY 168
Query: 518 SALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLV 577
AL ++ M G++P+ V Y+ +++ L +D A + M + PD Y L+
Sbjct: 169 DALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLI 228
Query: 578 DLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLK 637
+G A M + + P+V T N+L+ A ++ G++S+A + M+ L
Sbjct: 229 SGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLD 288
Query: 638 PSLQTYTLLL 647
P + TY+LL+
Sbjct: 289 PDIVTYSLLI 298
Score = 57.0 bits (136), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 46/195 (23%), Positives = 80/195 (41%)
Query: 551 LDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNS 610
LD++ +F M + +P + L+ K +E M G+ N+ TCN
Sbjct: 62 LDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNI 121
Query: 611 LLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYDMGFCHELMAVSG 670
LL+ F R QLS A L M+ LG +PS+ T+ LL+ YD + + M G
Sbjct: 122 LLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMG 181
Query: 671 HPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRESKRGLVDAVVDFLHKSGLKEEAG 730
+ ++ + + G D+ L M + ++++ L SG +A
Sbjct: 182 YKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDAT 241
Query: 731 SVWEVAAQKNVYPDA 745
+ ++ +YPD
Sbjct: 242 RMVSCMTKREIYPDV 256
>sp|Q9S7R4|PP125_ARATH Pentatricopeptide repeat-containing protein At1g74900,
mitochondrial OS=Arabidopsis thaliana GN=OTP43 PE=2 SV=1
Length = 482
Score = 148 bits (373), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 100/331 (30%), Positives = 164/331 (49%), Gaps = 10/331 (3%)
Query: 330 ANQVLKQLQDH-TVALGFFNWL-RRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMV 387
N VLK+L +H AL FF++L + HD ++ + I R + L+ +M
Sbjct: 59 VNSVLKRLWNHGPKALQFFHFLDNHHREYVHDASSFDLAIDIAARLHLHPTVWSLIHRMR 118
Query: 388 RDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLD 447
P+ T+ + Y A ++A+ +F M GC D ++ T++D+ K+ ++
Sbjct: 119 SLRIGPSPKTFAIVAERYASAGKPDKAVKLFLNMHEHGCFQDLASFNTILDVLCKSKRVE 178
Query: 448 VAMDMYKKMQAAGLSPDTFTYSVIIN--CLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNI 505
A ++++ ++ S DT TY+VI+N CL K A ++ EMV +G PNL TYN
Sbjct: 179 KAYELFRALRGR-FSVDTVTYNVILNGWCLIK--RTPKALEVLKEMVERGINPNLTTYNT 235
Query: 506 MIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKN 565
M+ +A + A + + +M+ E D VTY+ V+ G G + A VF EM R+
Sbjct: 236 MLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIREG 295
Query: 566 WVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAY 625
+P Y ++ + K NV A +E M++ G PNV T N L+ G+ S
Sbjct: 296 VLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGLFHAGEFSRGE 355
Query: 626 HLLQGMLNLGLKPSLQTYTLLL---SCCTEA 653
L+Q M N G +P+ QTY +++ S C+E
Sbjct: 356 ELMQRMENEGCEPNFQTYNMMIRYYSECSEV 386
Score = 129 bits (325), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 77/299 (25%), Positives = 148/299 (49%), Gaps = 4/299 (1%)
Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
+ G D ++ T++ +L ++++ +L + +R + VTYN +++ +
Sbjct: 154 EHGCFQDLASFNTILDVLCKSKRVEKAYELF-RALRGRFSVDTVTYNVILNGWCLIKRTP 212
Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
+AL+V K+M G P+ TY T++ +AG + A + + +M+ D TY+ ++
Sbjct: 213 KALEVLKEMVERGINPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVV 272
Query: 473 NCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFE 532
+ G AG ++ A +F EM+ +G +P++ TYN MI + K N ++A+ ++ +M G+E
Sbjct: 273 HGFGVAGEIKRARNVFDEMIREGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRGYE 332
Query: 533 PDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEW 592
P+ TY++++ L H G E + M + P+ Y +++ + + V KA
Sbjct: 333 PNVTTYNVLIRGLFHAGEFSRGEELMQRMENEGCEPNFQTYNMMIRYYSECSEVEKALGL 392
Query: 593 YEAMLQAGLRPNVPTCNSLLSAFL---RVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLS 648
+E M PN+ T N L+S R + A LL M+ G P T+ +L+
Sbjct: 393 FEKMGSGDCLPNLDTYNILISGMFVRKRSEDMVVAGKLLLEMVERGFIPRKFTFNRVLN 451
Score = 105 bits (263), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 71/253 (28%), Positives = 119/253 (47%), Gaps = 3/253 (1%)
Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
+ G + TY TM+ RA Q + +M + C+ +VVTY ++H +G A +
Sbjct: 223 ERGINPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIK 282
Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
A +VF +M G P TY +I + K ++ A+ M+++M G P+ TY+V+I
Sbjct: 283 RARNVFDEMIREGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLI 342
Query: 473 NCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFE 532
L AG +L M N+GC PN TYN+MI ++ + AL L+ M +
Sbjct: 343 RGLFHAGEFSRGEELMQRMENEGCEPNFQTYNMMIRYYSECSEVEKALGLFEKMGSGDCL 402
Query: 533 PDKVTYSIV---MEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKA 589
P+ TY+I+ M V + A + EM + ++P + + +++ GN A
Sbjct: 403 PNLDTYNILISGMFVRKRSEDMVVAGKLLLEMVERGFIPRKFTFNRVLNGLLLTGNQAFA 462
Query: 590 WEWYEAMLQAGLR 602
E ++G R
Sbjct: 463 KEILRLQSKSGSR 475
>sp|Q9FJE6|PP437_ARATH Putative pentatricopeptide repeat-containing protein At5g59900
OS=Arabidopsis thaliana GN=At5g59900 PE=3 SV=1
Length = 907
Score = 148 bits (373), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 103/393 (26%), Positives = 180/393 (45%), Gaps = 4/393 (1%)
Query: 356 FKHDEHTYTTMV-GILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
F E +++V G+ R + A+N L+ ++V G PN+ YN LI S + +EA
Sbjct: 328 FSPSEAAVSSLVEGLRKRGKIEEALN-LVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEA 386
Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINC 474
+F +M +G P+ VTY LID+ + G LD A+ +M GL + Y+ +IN
Sbjct: 387 ELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLING 446
Query: 475 LGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPD 534
K G + AA EM+N+ P +VTY ++ AL+LY +M G P
Sbjct: 447 HCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPS 506
Query: 535 KVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYE 594
T++ ++ L G + +A +F EM N P+ Y ++++ + + G++ KA+E+ +
Sbjct: 507 IYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLK 566
Query: 595 AMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYT-LLLSCCTEA 653
M + G+ P+ + L+ GQ S+A + G+ + + YT LL C E
Sbjct: 567 EMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREG 626
Query: 654 RSPYDMGFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSEDRESKRGLV 713
+ + C E M G + + G R L+ MH + +
Sbjct: 627 KLEEALSVCQE-MVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIY 685
Query: 714 DAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAV 746
+++D K+G +EA +W++ + P+ V
Sbjct: 686 TSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEV 718
Score = 140 bits (353), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 118/462 (25%), Positives = 184/462 (39%), Gaps = 64/462 (13%)
Query: 334 LKQLQDHTVALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQP 393
L + + +A+ FN + G + D + YT ++ L + +++ M GC
Sbjct: 202 LVKFRHFGLAMELFNDMV-SVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEATGCDV 260
Query: 394 NVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMY 453
N+V YN LI + + EA+ + K + +PD VTYCTL+ K ++ ++M
Sbjct: 261 NIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMM 320
Query: 454 KKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKA 513
+M SP S ++ L K G ++ A L +V+ G PNL YN +I K
Sbjct: 321 DEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKG 380
Query: 514 RNYQSALKLYRDMQNAGFEPDKVTYSIVMEVL---------------------------- 545
R + A L+ M G P+ VTYSI++++
Sbjct: 381 RKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPY 440
Query: 546 -----GHCGYLD--EAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQ 598
GHC + D AE AEM K P Y L+ + G + KA Y M
Sbjct: 441 NSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTG 500
Query: 599 AGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSCCTEARSPYD 658
G+ P++ T +LLS R G + DA L M +KP+ TY +++
Sbjct: 501 KGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIE---------- 550
Query: 659 MGFCHELMAVSGHPAHMFLLSMPSPG--PDGQNVRDHVGS------------FLEMMHSE 704
G+C E A FL M G PD + R + F++ +H
Sbjct: 551 -GYCEE---GDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKG 606
Query: 705 DRESKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAV 746
+ E ++ + G EEA SV + Q+ V D V
Sbjct: 607 NCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLV 648
Score = 123 bits (308), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 89/323 (27%), Positives = 146/323 (45%), Gaps = 9/323 (2%)
Query: 347 FNWLRR--QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHS 404
F +L+ + G D ++Y ++ L Q +D + + C+ N + Y L+H
Sbjct: 562 FEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHG 621
Query: 405 YGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPD 464
+ R L EAL V ++M G + D V Y LID K + + K+M GL PD
Sbjct: 622 FCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPD 681
Query: 465 TFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYR 524
Y+ +I+ K G + A ++ M+N+GC+PN VTY +I KA A L
Sbjct: 682 DVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCS 741
Query: 525 DMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAV-FAEMRRKNWVPDEPVYGLLVDLWGKA 583
MQ P++VTY +++L G +D +AV K + + Y +L+ + +
Sbjct: 742 KMQPVSSVPNQVTYGCFLDILTK-GEVDMQKAVELHNAILKGLLANTATYNMLIRGFCRQ 800
Query: 584 GNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTY 643
G + +A E M+ G+ P+ T ++++ R + A L M G++P Y
Sbjct: 801 GRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSMTEKGIRPDRVAY 860
Query: 644 -TLLLSCCTEARSPYDMGFCHEL 665
TL+ CC +MG EL
Sbjct: 861 NTLIHGCCVAG----EMGKATEL 879
Score = 119 bits (297), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 92/400 (23%), Positives = 177/400 (44%), Gaps = 2/400 (0%)
Query: 347 FNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYG 406
F + + + T + ++ L + R FG +L + MV G +P+V Y +I S
Sbjct: 179 FKMMITKVSLLPEVRTLSALLHGLVKFRHFGLAMELFNDMVSVGIRPDVYIYTGVIRSLC 238
Query: 407 RANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTF 466
L+ A ++ M+ GC+ + V Y LID K + A+ + K + L PD
Sbjct: 239 ELKDLSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVV 298
Query: 467 TYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDM 526
TY ++ L K + ++ EM+ P+ + ++ K + AL L + +
Sbjct: 299 TYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRV 358
Query: 527 QNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNV 586
+ G P+ Y+ +++ L EAE +F M + P++ Y +L+D++ + G +
Sbjct: 359 VDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKL 418
Query: 587 RKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLL 646
A + M+ GL+ +V NSL++ + G +S A + M+N L+P++ TYT L
Sbjct: 419 DTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSL 478
Query: 647 L-SCCTEARSPYDMGFCHELMAVSGHPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSED 705
+ C++ + + HE+ P+ ++ S +RD V F EM +
Sbjct: 479 MGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEW-N 537
Query: 706 RESKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDA 745
+ R + +++ + G +A + +K + PD
Sbjct: 538 VKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDT 577
Score = 114 bits (284), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 74/295 (25%), Positives = 142/295 (48%)
Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
+ G + ++ TY+ ++ + R + L +MV G + +V YN LI+ + + ++
Sbjct: 395 KIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDIS 454
Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
A +M EP VTY +L+ + G ++ A+ +Y +M G++P +T++ ++
Sbjct: 455 AAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLL 514
Query: 473 NCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFE 532
+ L +AG ++ A +LF EM PN VTYN+MI + + A + ++M G
Sbjct: 515 SGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIV 574
Query: 533 PDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEW 592
PD +Y ++ L G EA+ + + N +E Y L+ + + G + +A
Sbjct: 575 PDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSV 634
Query: 593 YEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLL 647
+ M+Q G+ ++ L+ L+ + LL+ M + GLKP YT ++
Sbjct: 635 CQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMI 689
Score = 113 bits (282), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 115/231 (49%), Gaps = 12/231 (5%)
Query: 346 FFNWLRRQ--AGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIH 403
FF L+ G K D+ YT+M+ + F + D M+ +GC PN VTY +I+
Sbjct: 666 FFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVIN 725
Query: 404 SYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQA----- 458
+A ++NEA + +MQ V P++VTY +DI K +DM K ++
Sbjct: 726 GLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKG-----EVDMQKAVELHNAIL 780
Query: 459 AGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQS 518
GL +T TY+++I + G ++ A +L M+ G P+ +TY MI + + +
Sbjct: 781 KGLLANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKK 840
Query: 519 ALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPD 569
A++L+ M G PD+V Y+ ++ G + +A + EM R+ +P+
Sbjct: 841 AIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLIPN 891
Score = 95.1 bits (235), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 68/227 (29%), Positives = 106/227 (46%), Gaps = 2/227 (0%)
Query: 382 LLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHA 441
LL +M G +P+ V Y +I + + EA ++ M GC P+ VTY +I+
Sbjct: 669 LLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLC 728
Query: 442 KAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAG-HLQAAHQLFCEMVNQGCIPNL 500
KAGF++ A + KMQ P+ TY ++ L K +Q A +L + +G + N
Sbjct: 729 KAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVELH-NAILKGLLANT 787
Query: 501 VTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAE 560
TYN++I + + A +L M G PD +TY+ ++ L + +A ++
Sbjct: 788 ATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNS 847
Query: 561 MRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPT 607
M K PD Y L+ AG + KA E ML+ GL PN T
Sbjct: 848 MTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLIPNNKT 894
Score = 77.0 bits (188), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 81/381 (21%), Positives = 160/381 (41%), Gaps = 19/381 (4%)
Query: 291 FASTGNVVESVSRILRQWKWGPLAEEALGNTNYSMDAYQANQVLKQLQDHTVALGFFNWL 350
A V++V RI+R + +A + + + ++ + D + L FFN+L
Sbjct: 35 IAEDKQFVDAVKRIVRGKRSWEIALSSELVSRRLKTVHVEEILIGTIDDPKLGLRFFNFL 94
Query: 351 RRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANY 410
GF H ++ ++ L +A F + LL ++ +P+ V +N L Y +
Sbjct: 95 GLHRGFDHSTASFCILIHALVKANLFWPASSLLQTLLLRALKPSDV-FNVLFSCYEKCKL 153
Query: 411 LNEA-LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYS 469
+ + D+ Q V RV LD + + L P+ T S
Sbjct: 154 SSSSSFDLLIQHYV---RSRRV--------------LDGVLVFKMMITKVSLLPEVRTLS 196
Query: 470 VIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNA 529
+++ L K H A +LF +MV+ G P++ Y +I + ++ A ++ M+
Sbjct: 197 ALLHGLVKFRHFGLAMELFNDMVSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEAT 256
Query: 530 GFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNVRKA 589
G + + V Y+++++ L + EA + ++ K+ PD Y LV K
Sbjct: 257 GCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIG 316
Query: 590 WEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTLLLSC 649
E + ML P+ +SL+ + G++ +A +L++ +++ G+ P+L Y L+
Sbjct: 317 LEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDS 376
Query: 650 CTEARSPYDMGFCHELMAVSG 670
+ R ++ + M G
Sbjct: 377 LCKGRKFHEAELLFDRMGKIG 397
Score = 58.2 bits (139), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 57/113 (50%)
Query: 355 GFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEA 414
G + TY ++ R + ++L+ +M+ DG P+ +TY +I+ R N + +A
Sbjct: 782 GLLANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKA 841
Query: 415 LDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFT 467
++++ M G PDRV Y TLI AG + A ++ +M GL P+ T
Sbjct: 842 IELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLIPNNKT 894
>sp|Q9CAN6|PPR97_ARATH Pentatricopeptide repeat-containing protein At1g63070,
mitochondrial OS=Arabidopsis thaliana GN=At1g63070 PE=1
SV=1
Length = 590
Score = 147 bits (372), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 86/267 (32%), Positives = 140/267 (52%), Gaps = 1/267 (0%)
Query: 382 LLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHA 441
L+DQMV G QP+ VT+ L+H + N +EA+ + ++M V GC+PD VTY +I+
Sbjct: 167 LVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLC 226
Query: 442 KAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLV 501
K G D+A+++ KM+ + D Y+ II+ L K H+ A LF +M +G P++
Sbjct: 227 KRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVF 286
Query: 502 TYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEM 561
TYN +I+ + A +L DM PD V ++ +++ G L EAE ++ EM
Sbjct: 287 TYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEM 346
Query: 562 -RRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQ 620
+ K+ PD Y L+ + K V + E + M Q GL N T +L+ F +
Sbjct: 347 VKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARD 406
Query: 621 LSDAYHLLQGMLNLGLKPSLQTYTLLL 647
+A + + M++ G+ P + TY +LL
Sbjct: 407 CDNAQMVFKQMVSDGVHPDIMTYNILL 433
Score = 123 bits (309), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 84/313 (26%), Positives = 155/313 (49%), Gaps = 2/313 (0%)
Query: 343 ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLI 402
A FN + + G K D TY ++ L ++ ++LL M+ P++V +N LI
Sbjct: 269 AFDLFNKMETK-GIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALI 327
Query: 403 HSYGRANYLNEALDVFKQM-QVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGL 461
++ + L EA ++ +M + C PD V Y TLI K ++ M+++++M GL
Sbjct: 328 DAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGL 387
Query: 462 SPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALK 521
+T TY+ +I+ +A A +F +MV+ G P+++TYNI++ N ++AL
Sbjct: 388 VGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALV 447
Query: 522 LYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWG 581
++ MQ + D VTY+ ++E L G +++ +F + K P+ Y ++ +
Sbjct: 448 VFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFC 507
Query: 582 KAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQ 641
+ G +A + M + G PN T N+L+ A LR G + + L++ M + G
Sbjct: 508 RKGLKEEADALFVEMKEDGPLPNSGTYNTLIRARLRDGDEAASAELIKEMRSCGFAGDAS 567
Query: 642 TYTLLLSCCTEAR 654
T+ L+ + + R
Sbjct: 568 TFGLVTNMLHDGR 580
Score = 113 bits (283), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 108/462 (23%), Positives = 197/462 (42%), Gaps = 41/462 (8%)
Query: 324 SMDAYQANQVLKQLQDHTV--ALGFFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINK 381
S D + N K LQD + A+G F + + F ++ ++ + + +F +
Sbjct: 38 SSDDCRENLSRKVLQDLKLDDAIGLFGDMVKSRPFPSIVE-FSKLLSAIAKMNKFDLVIS 96
Query: 382 LLDQMVRDGCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHA 441
L +QM G N+ TY+ I+ + R + L+ AL + +M +G P VT +L++
Sbjct: 97 LGEQMQNLGISHNLYTYSIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFC 156
Query: 442 KAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLV 501
+ A+ + +M G PDT T++ +++ L + A L MV +GC P+LV
Sbjct: 157 HGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLV 216
Query: 502 T-----------------------------------YNIMIALQAKARNYQSALKLYRDM 526
T YN +I K ++ A L+ M
Sbjct: 217 TYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKM 276
Query: 527 QNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPDEPVYGLLVDLWGKAGNV 586
+ G +PD TY+ ++ L + G +A + ++M KN PD + L+D + K G +
Sbjct: 277 ETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKL 336
Query: 587 RKAWEWYEAMLQAG-LRPNVPTCNSLLSAFLRVGQLSDAYHLLQGMLNLGLKPSLQTYTL 645
+A + Y+ M+++ P+V N+L+ F + ++ + + + M GL + TYT
Sbjct: 337 VEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTT 396
Query: 646 LLSCCTEARSPYDMGFCHELMAVSG-HPAHMFLLSMPSPGPDGQNVRDHVGSFLEMMHSE 704
L+ +AR + + M G HP M + + NV + F E M
Sbjct: 397 LIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVF-EYMQKR 455
Query: 705 DRESKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAV 746
D + +++ L K+G E+ ++ + K V P+ V
Sbjct: 456 DMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVV 497
Score = 111 bits (278), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 72/246 (29%), Positives = 125/246 (50%), Gaps = 2/246 (0%)
Query: 381 KLLDQMVRDG-CQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDI 439
KL D+MV+ C P+VV YN LI + + + E ++VF++M G + VTY TLI
Sbjct: 341 KLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHG 400
Query: 440 HAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPN 499
+A D A ++K+M + G+ PD TY+++++ L G+++ A +F M + +
Sbjct: 401 FFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLD 460
Query: 500 LVTYNIMIALQAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFA 559
+VTY MI KA + L+ + G +P+ VTY+ +M G +EA+A+F
Sbjct: 461 IVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFV 520
Query: 560 EMRRKNWVPDEPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVG 619
EM+ +P+ Y L+ + G+ + E + M G + T L++ L G
Sbjct: 521 EMKEDGPLPNSGTYNTLIRARLRDGDEAASAELIKEMRSCGFAGDASTF-GLVTNMLHDG 579
Query: 620 QLSDAY 625
+L ++
Sbjct: 580 RLDKSF 585
Score = 105 bits (263), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 87/335 (25%), Positives = 142/335 (42%), Gaps = 12/335 (3%)
Query: 335 KQLQDHTVALG-----FFNWLRRQAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRD 389
K L HTV L W R AG D+ +L + AI L MV+
Sbjct: 11 KCLHRHTVLLKGNPRTTLCWERSFAGASSDDCRENLSRKVLQDLKLDDAIG-LFGDMVKS 69
Query: 390 GCQPNVVTYNRLIHSYGRANYLNEALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVA 449
P++V +++L+ + + N + + + +QMQ +G + TY I+ + L +A
Sbjct: 70 RPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIFINYFCRRSQLSLA 129
Query: 450 MDMYKKMQAAGLSPDTFTYSVIINCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIAL 509
+ + KM G P T + ++N + A L +MV G P+ VT+ ++
Sbjct: 130 LAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHG 189
Query: 510 QAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLDEAEAVFAEMRRKNWVPD 569
+ A+ L M G +PD VTY V+ L G D A + +M + D
Sbjct: 190 LFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEAD 249
Query: 570 EPVYGLLVDLWGKAGNVRKAWEWYEAMLQAGLRPNVPTCNSLLSAFLRVGQLSDAYHLLQ 629
+Y ++D K ++ A++ + M G++P+V T N L+S G+ SDA LL
Sbjct: 250 VVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLS 309
Query: 630 GMLNLGLKPSLQTYTLLLSC------CTEARSPYD 658
ML + P L + L+ EA YD
Sbjct: 310 DMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYD 344
Score = 105 bits (262), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 63/202 (31%), Positives = 107/202 (52%), Gaps = 1/202 (0%)
Query: 353 QAGFKHDEHTYTTMVGILGRARQFGAINKLLDQMVRDGCQPNVVTYNRLIHSYGRANYLN 412
Q G + TYTT++ +AR + QMV DG P+++TYN L+ +
Sbjct: 384 QRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVE 443
Query: 413 EALDVFKQMQVVGCEPDRVTYCTLIDIHAKAGFLDVAMDMYKKMQAAGLSPDTFTYSVII 472
AL VF+ MQ + D VTY T+I+ KAG ++ D++ + G+ P+ TY+ ++
Sbjct: 444 TALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMM 503
Query: 473 NCLGKAGHLQAAHQLFCEMVNQGCIPNLVTYNIMIALQAKARNYQSALKLYRDMQNAGFE 532
+ + G + A LF EM G +PN TYN +I + + + ++ +L ++M++ GF
Sbjct: 504 SGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLIRARLRDGDEAASAELIKEMRSCGFA 563
Query: 533 PDKVTYSIVMEVLGHCGYLDEA 554
D T+ +V +L H G LD++
Sbjct: 564 GDASTFGLVTNML-HDGRLDKS 584
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.132 0.397
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 314,011,379
Number of Sequences: 539616
Number of extensions: 13175556
Number of successful extensions: 44817
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 450
Number of HSP's successfully gapped in prelim test: 153
Number of HSP's that attempted gapping in prelim test: 34870
Number of HSP's gapped (non-prelim): 4139
length of query: 856
length of database: 191,569,459
effective HSP length: 126
effective length of query: 730
effective length of database: 123,577,843
effective search space: 90211825390
effective search space used: 90211825390
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 66 (30.0 bits)